TransTermHP
Transcription Terminator Predictions

Terminator Predictions

Click on a organism in the table below to view its transcription terminator predictions. These files contain all terminator-like hairpins with confidence score >= 30. Sequence and .ptt annotations were taken from GenBank on June 6, 2006. The predictions were last updated on Sep. 7, 2006.

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Bacillus anthracis str. Ames    
Bacillus anthracis str. Ames Ancestor    
Bacillus anthracis str. Sterne    
Bacillus cereus ATCC 10987    
Bacillus cereus ATCC 14579    
Bacillus cereus E33L    
Bacillus clausii KSM-K16    
Bacillus halodurans C-125    
Bacillus licheniformis ATCC 14580    
Bacillus licheniformis ATCC 14580    
Bacillus subtilis subsp. subtilis str. 168    
Bacillus thuringiensis serovar konkukian str. 97-27    
Bacteroides fragilis NCTC 9343    
Bacteroides fragilis YCH46    
Bacteroides thetaiotaomicron VPI-5482    
Bartonella henselae str. Houston-1    
Bartonella quintana str. Toulouse    
Baumannia cicadellinicola str. Hc (Homalodisca coagulata)    
Bdellovibrio bacteriovorus HD100    
Bifidobacterium longum NCC2705    
Bordetella bronchiseptica RB50    
Bordetella parapertussis 12822    
Bordetella pertussis Tohama I    
Borrelia burgdorferi B31    
Borrelia garinii PBi    
Bradyrhizobium japonicum USDA 110    
Brucella abortus biovar 1 str. 9-941    
Brucella melitensis 16M    
Brucella melitensis biovar Abortus 2308    
Brucella suis 1330    
Buchnera aphidicola str. APS (Acyrthosiphon pisum)    
Buchnera aphidicola str. Bp (Baizongia pistaciae)    
Buchnera aphidicola str. Sg (Schizaphis graminum)    
Burkholderia mallei ATCC 23344    
Burkholderia pseudomallei 1710b    
Burkholderia pseudomallei K96243    
Burkholderia sp. 383    
Burkholderia thailandensis E264    
Burkholderia xenovorans LB400    
No K organisms currently exist in the TransTermHP database
No Q organisms currently exist in the TransTermHP database
Saccharophagus degradans 2-40    
Salinibacter ruber DSM 13855    
Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67    
Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150    
Salmonella enterica subsp. enterica serovar Typhi str. CT18    
Salmonella enterica subsp. enterica serovar Typhi Ty2    
Salmonella typhimurium LT2    
Shewanella denitrificans OS217    
Shewanella oneidensis MR-1    
Shigella boydii Sb227    
Shigella dysenteriae Sd197    
Shigella flexneri 2a str. 2457T    
Shigella flexneri 2a str. 301    
Shigella sonnei Ss046    
Silicibacter pomeroyi DSS-3    
Silicibacter sp. TM1040    
Sinorhizobium meliloti 1021    
Sodalis glossinidius str. morsitans    
Sphingopyxis alaskensis RB2256    
Staphylococcus aureus RF122    
Staphylococcus aureus subsp. aureus COL    
Staphylococcus aureus subsp. aureus MRSA252    
Staphylococcus aureus subsp. aureus MSSA476    
Staphylococcus aureus subsp. aureus Mu50    
Staphylococcus aureus subsp. aureus MW2    
Staphylococcus aureus subsp. aureus N315    
Staphylococcus aureus subsp. aureus NCTC 8325    
Staphylococcus aureus subsp. aureus USA300    
Staphylococcus epidermidis ATCC 12228    
Staphylococcus epidermidis RP62A    
Staphylococcus haemolyticus JCSC1435    
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305    
Streptococcus agalactiae 2603V/R    
Streptococcus agalactiae A909    
Streptococcus agalactiae NEM316    
Streptococcus mutans UA159    
Streptococcus pneumoniae R6    
Streptococcus pneumoniae TIGR4    
Streptococcus pyogenes M1 GAS    
Streptococcus pyogenes MGAS10270    
Streptococcus pyogenes MGAS10394    
Streptococcus pyogenes MGAS10750    
Streptococcus pyogenes MGAS2096    
Streptococcus pyogenes MGAS315    
Streptococcus pyogenes MGAS5005    
Streptococcus pyogenes MGAS6180    
Streptococcus pyogenes MGAS8232    
Streptococcus pyogenes MGAS9429    
Streptococcus pyogenes SSI-1    
Streptococcus thermophilus CNRZ1066    
Streptococcus thermophilus LMG 18311    
Streptomyces avermitilis MA-4680    
Streptomyces coelicolor A3(2)    
Sulfolobus acidocaldarius DSM 639    
Sulfolobus solfataricus P2    
Sulfolobus tokodaii str. 7    
Symbiobacterium thermophilum IAM 14863    
Synechococcus elongatus PCC 6301    
Synechococcus elongatus PCC 7942    
Synechococcus sp. CC9605    
Synechococcus sp. CC9902    
Synechococcus sp. JA-2-3Ba(2-13)    
Synechococcus sp. JA-3-3Ab    
Synechococcus sp. WH 8102    
Synechocystis sp. PCC 6803    
Syntrophus aciditrophicus SB