TransTermHP
Transcription Terminator Predictions

Terminator Predictions

Click on a organism in the table below to view its transcription terminator predictions. These files contain all terminator-like hairpins with confidence score >= 30. Sequence and .ptt annotations were taken from GenBank on June 6, 2006. The predictions were last updated on Sep. 7, 2006.

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Acaryochloris marina MBIC11017 plasmid pREB9    
Acholeplasma laidlawii PG-8A    
Acidiphilium cryptum JF-5    
Acidithiobacillus ferrooxidans ATCC 23270    
Acidithiobacillus ferrooxidans ATCC 53993    
Acidobacteria bacterium Ellin345    
Acidothermus cellulolyticus 11B    
Acidovorax avenae subsp. citrulli AAC00-1    
Acidovorax sp. JS42    
Acinetobacter baumannii    
Acinetobacter baumannii AB0057    
Acinetobacter baumannii AB307-0294    
Acinetobacter baumannii ACICU    
Acinetobacter baumannii ATCC 17978    
Acinetobacter baumannii AYE    
Acinetobacter sp. ADP1    
Actinobacillus pleuropneumoniae L20    
Actinobacillus pleuropneumoniae serovar 3 str. JL03    
Actinobacillus pleuropneumoniae serovar 7 str. AP76 plasmid APP7_A    
Actinobacillus succinogenes 130Z    
Aeromonas hydrophila subsp. hydrophila ATCC 7966    
Aeromonas salmonicida subsp. salmonicida A449 plasmid pAsa5    
Aeropyrum pernix K1    
Agrobacterium radiobacter K84 plasmid pAgK84    
Agrobacterium tumefaciens str. C58 plasmid Ti    
Agrobacterium vitis S4 plasmid pAtS4b    
Akkermansia muciniphila ATCC BAA-835    
Alcanivorax borkumensis SK2    
Aliivibrio salmonicida LFI1238 plasmid pVSAL43    
Alkalilimnicola ehrlichei MLHE-1    
Alkaliphilus metalliredigens QYMF    
Alkaliphilus oremlandii OhILAs    
Alteromonas macleodii Deep ecotype    
Anabaena variabilis ATCC 29413    
Anaerocellum thermophilum DSM 6725 plasmid pATHE02    
Anaeromyxobacter dehalogenans 2CP-1    
Anaeromyxobacter dehalogenans 2CP-C    
Anaeromyxobacter sp. Fw109-5    
Anaeromyxobacter sp. K    
Anaplasma marginale str. Florida    
Anaplasma marginale str. St. Maries    
Anaplasma phagocytophilum HZ    
Anoxybacillus flavithermus WK1    
Aquifex aeolicus VF5 plasmid ece1    
Archaeoglobus fulgidus DSM 4304    
Arcobacter butzleri RM4018    
Arthrobacter aurescens TC1 plasmid TC2    
Arthrobacter chlorophenolicus A6    
Arthrobacter sp. FB24 chromosome 1    
Aster yellows witches-broom phytoplasma AYWB plasmid pAYWB-IV    
Azoarcus sp. BH72    
Azoarcus sp. EbN1 plasmid 2    
Azorhizobium caulinodans ORS 571    
Bacillus amyloliquefaciens FZB42    
Bacillus anthracis str. Ames    
Bacillus anthracis str. Ames Ancestor    
Bacillus anthracis str. Sterne    
Bacillus cereus AH187    
Bacillus cereus AH820 plasmid pAH820_272    
Bacillus cereus ATCC 10987 plasmid pBc10987    
Bacillus cereus ATCC 14579    
Bacillus cereus B4264    
Bacillus cereus E33L plasmid pE33L9    
Bacillus cereus G9842 plasmid pG9842_209    
Bacillus cereus Q1 plasmid pBc239    
Bacillus cereus subsp. cytotoxis NVH 391-98    
Bacillus clausii KSM-K16    
Bacillus halodurans C-125    
Bacillus licheniformis ATCC 14580    
Bacillus licheniformis ATCC 14580    
Bacillus pumilus SAFR-032    
Bacillus subtilis subsp. subtilis str. 168    
Bacillus thuringiensis serovar konkukian str. 97-27 plasmid pBT9727    
Bacillus thuringiensis str. Al Hakam    
Bacillus weihenstephanensis KBAB4    
Bacteroides fragilis NCTC 9343 plasmid pBF9343    
Bacteroides fragilis YCH46    
Bacteroides thetaiotaomicron VPI-5482 plasmid p5482    
Bacteroides vulgatus ATCC 8482    
Bartonella bacilliformis KC583    
Bartonella henselae str. Houston-1    
Bartonella quintana str. Toulouse    
Bartonella tribocorum CIP 105476    
Baumannia cicadellinicola str. Hc (Homalodisca coagulata)    
Bdellovibrio bacteriovorus HD100    
Beijerinckia indica subsp. indica ATCC 9039    
Bifidobacterium adolescentis ATCC 15703    
Bifidobacterium animalis subsp. lactis AD011    
Bifidobacterium longum DJO10A    
Bifidobacterium longum NCC2705 plasmid pBLO1    
Bifidobacterium longum subsp. infantis ATCC 15697    
Bordetella avium 197N    
Bordetella bronchiseptica RB50    
Bordetella parapertussis 12822    
Bordetella pertussis Tohama I    
Bordetella petrii DSM 12804    
Borrelia afzelii PKo plasmid lp25    
Borrelia burgdorferi B31 plasmid cp9    
Borrelia burgdorferi ZS7 plasmid ZS7_lp28-4    
Borrelia duttonii Ly plasmid pl27    
Borrelia garinii PBi    
Borrelia hermsii DAH    
Borrelia recurrentis A1 plasmid pl6    
Borrelia turicatae 91E135    
Bradyrhizobium japonicum USDA 110    
Bradyrhizobium sp. BTAi1    
Bradyrhizobium sp. ORS278    
Brucella abortus biovar 1 str. 9-941 chromosome II    
Brucella abortus S19 chromosome 1    
Brucella canis ATCC 23365 chromosome II    
Brucella melitensis 16M chromosome II    
Brucella melitensis biovar Abortus 2308 chromosome II    
Brucella ovis ATCC 25840 chromosome I    
Brucella suis 1330 chromosome II    
Brucella suis ATCC 23445 chromosome I    
Buchnera aphidicola (Cinara cedri) plasmid pLeu-BCc    
Buchnera aphidicola str. 5A (Acyrthosiphon pisum)    
Buchnera aphidicola str. APS (Acyrthosiphon pisum)    
Buchnera aphidicola str. Bp (Baizongia pistaciae) plasmid pBBp1    
Buchnera aphidicola str. Sg (Schizaphis graminum)    
Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)    
Burkholderia ambifaria MC40-6 chromosome 3    
Burkholderia cenocepacia AU 1054 chromosome 3    
Burkholderia cenocepacia HI2424 plasmid 1    
Burkholderia cenocepacia J2315 plasmid pBCJ2315    
Burkholderia cenocepacia MC0-3 chromosome 2    
Burkholderia cepacia AMMD chromosome 3    
Burkholderia mallei ATCC 23344 chromosome 2    
Burkholderia mallei NCTC 10229 chromosome I    
Burkholderia mallei NCTC 10247 chromosome I    
Burkholderia mallei SAVP1 chromosome I    
Burkholderia multivorans ATCC 17616 chromosome 2    
Burkholderia multivorans ATCC 17616 chromosome 3    
Burkholderia phymatum STM815 plasmid pBPHY02    
Burkholderia phytofirmans PsJN chromosome 1    
Burkholderia pseudomallei 1106a chromosome II    
Burkholderia pseudomallei 1710b chromosome II    
Burkholderia pseudomallei 668 chromosome II    
Burkholderia pseudomallei K96243 chromosome 2    
Burkholderia sp. 383 chromosome 2    
Burkholderia thailandensis E264 chromosome I    
Burkholderia vietnamiensis G4 chromosome 1    
Burkholderia xenovorans LB400 chromosome 3    
Caldicellulosiruptor saccharolyticus DSM 8903    
Caldivirga maquilingensis IC-167    
Campylobacter concisus 13826    
Campylobacter curvus 525.92    
Campylobacter fetus subsp. fetus 82-40    
Campylobacter hominis ATCC BAA-381    
Campylobacter jejuni RM1221    
Campylobacter jejuni subsp. doylei 269.97    
Campylobacter jejuni subsp. jejuni 81-176 plasmid pTet    
Campylobacter jejuni subsp. jejuni 81116    
Campylobacter jejuni subsp. jejuni NCTC 11168    
Campylobacter lari RM2100 megaplasmid pCL2100    
Candidatus Amoebophilus asiaticus 5a2    
Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2    
Candidatus Blochmannia floridanus    
Candidatus Blochmannia pennsylvanicus str. BPEN    
Candidatus Carsonella ruddii PV    
Candidatus Desulfococcus oleovorans Hxd3    
Candidatus Desulforudis audaxviator MP104C    
Candidatus Korarchaeum cryptofilum OPF8    
Candidatus Methanoregula boonei 6A8    
Candidatus Methanosphaerula palustris E1-9c    
Candidatus Pelagibacter ubique HTCC1062    
Candidatus Phytoplasma australiense    
Candidatus Phytoplasma mali    
Candidatus Protochlamydia amoebophila UWE25    
Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)    
Candidatus Sulcia muelleri GWSS    
Candidatus Vesicomyosocius okutanii HA    
Carboxydothermus hydrogenoformans Z-2901    
Caulobacter crescentus CB15    
Caulobacter crescentus NA1000    
Caulobacter sp. K31    
Cellvibrio japonicus Ueda107    
Chlamydia muridarum Nigg    
Chlamydia trachomatis 434/Bu    
Chlamydia trachomatis A/HAR-13 plasmid pCTA    
Chlamydia trachomatis D/UW-3/CX    
Chlamydia trachomatis L2b/UCH-1/proctitis    
Chlamydophila abortus S26/3    
Chlamydophila caviae GPIC plasmid pCpGP1    
Chlamydophila felis Fe/C-56 plasmid pCfe1    
Chlamydophila pneumoniae AR39    
Chlamydophila pneumoniae CWL029    
Chlamydophila pneumoniae J138    
Chlamydophila pneumoniae TW-183    
Chlorobaculum parvum NCIB 8327    
Chlorobium chlorochromatii CaD3    
Chlorobium limicola DSM 245    
Chlorobium phaeobacteroides BS1    
Chlorobium phaeobacteroides DSM 266    
Chlorobium tepidum TLS    
Chloroflexus aggregans DSM 9485    
Chloroflexus aurantiacus J-10-fl    
Chloroflexus sp. Y-400-fl    
Chloroherpeton thalassium ATCC 35110    
Chromobacterium violaceum ATCC 12472    
Chromohalobacter salexigens DSM 3043    
Citrobacter koseri ATCC BAA-895 plasmid pCKO2    
Clavibacter michiganensis subsp. michiganensis NCPPB 382    
Clavibacter michiganensis subsp. sepedonicus plasmid pCSL1    
Clostridium acetobutylicum ATCC 824    
Clostridium beijerinckii NCIMB 8052    
Clostridium botulinum A str. ATCC 19397    
Clostridium botulinum A str. ATCC 3502 plasmid pBOT3502    
Clostridium botulinum A str. Hall    
Clostridium botulinum A3 str. Loch Maree    
Clostridium botulinum B str. Eklund 17B plasmid pCLL    
Clostridium botulinum B1 str. Okra    
Clostridium botulinum E3 str. Alaska E43    
Clostridium botulinum F str. Langeland plasmid pCLI    
Clostridium cellulolyticum H10    
Clostridium difficile 630    
Clostridium kluyveri DSM 555    
Clostridium kluyveri NBRC 12016    
Clostridium novyi NT    
Clostridium perfringens ATCC 13124    
Clostridium perfringens str. 13    
Clostridium phage phiSM101    
Clostridium phytofermentans ISDg    
Clostridium tetani E88 plasmid pE88    
Clostridium thermocellum ATCC 27405    
Colwellia psychrerythraea 34H    
Coprothermobacter proteolyticus DSM 5265    
Corynebacterium diphtheriae NCTC 13129    
Corynebacterium efficiens YS-314    
Corynebacterium glutamicum ATCC 13032    
Corynebacterium glutamicum ATCC 13032    
Corynebacterium glutamicum R plasmid pCGR1    
Corynebacterium jeikeium K411    
Corynebacterium urealyticum DSM 7109    
Coxiella burnetii CbuG_Q212    
Coxiella burnetii CbuK_Q154    
Coxiella burnetii Dugway 5J108-111    
Coxiella burnetii RSA 331    
Coxiella burnetii RSA 493 plasmid pQpH1    
Cupriavidus taiwanensis    
Cyanothece sp. ATCC 51142 chromosome linear    
Cyanothece sp. PCC 7424 plasmid pP742401    
Cyanothece sp. PCC 7425 plasmid pP742502    
Cyanothece sp. PCC 8801 plasmid pP880103    
Cytophaga hutchinsonii ATCC 33406    
Lactobacillus acidophilus NCFM    
Lactobacillus brevis ATCC 367 plasmid 2    
Lactobacillus casei    
Lactobacillus casei ATCC 334    
Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842    
Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365    
Lactobacillus fermentum IFO 3956    
Lactobacillus gasseri ATCC 33323    
Lactobacillus helveticus DPC 4571    
Lactobacillus johnsonii NCC 533    
Lactobacillus plantarum WCFS1 plasmid pWCFS103    
Lactobacillus reuteri DSM 20016    
Lactobacillus reuteri JCM 1112    
Lactobacillus sakei subsp. sakei 23K    
Lactobacillus salivarius UCC118 plasmid pMP118    
Lactococcus lactis subsp. cremoris MG1363    
Lactococcus lactis subsp. cremoris SK11    
Lactococcus lactis subsp. lactis Il1403    
Lawsonia intracellularis PHE/MN1-00 plasmid 3    
Legionella pneumophila str. Corby    
Legionella pneumophila str. Lens    
Legionella pneumophila str. Paris    
Legionella pneumophila subsp. pneumophila str. Philadelphia 1    
Leifsonia xyli subsp. xyli str. CTCB07    
Leptospira biflexa serovar Patoc strain Patoc 1 (Ames) plasmid p74    
Leptospira biflexa serovar Patoc strain Patoc 1 (Paris) plasmid p74    
Leptospira borgpetersenii serovar Hardjo-bovis JB197 chromosome 2    
Leptospira borgpetersenii serovar Hardjo-bovis L550 chromosome 2    
Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130 chromos    
Leptospira interrogans serovar Lai str. 56601 chromosome II    
Leptothrix cholodnii SP-6    
Leuconostoc citreum KM20    
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293    
Listeria innocua Clip11262 plasmid pLI100    
Listeria monocytogenes EGD-e    
Listeria monocytogenes HCC23    
Listeria monocytogenes str. 4b F2365    
Listeria welshimeri serovar 6b str. SLCC5334    
Lysinibacillus sphaericus C3-41    
Macrococcus caseolyticus JCSC5402 plasmid pMCCL8    
Magnetococcus sp. MC-1    
Magnetospirillum magneticum AMB-1    
Mannheimia succiniciproducens MBEL55E    
Maricaulis maris MCS10    
Marinobacter aquaeolei VT8    
Marinomonas sp. MWYL1    
Mesoplasma florum L1    
Mesorhizobium loti MAFF303099 plasmid pMLb    
Mesorhizobium sp. BNC1    
Metallosphaera sedula DSM 5348    
Methanobrevibacter smithii ATCC 35061    
Methanocaldococcus jannaschii DSM 2661 extrachromosomal    
Methanococcoides burtonii DSM 6242    
Methanococcus aeolicus Nankai-3    
Methanococcus maripaludis C5 plasmid pMMC501    
Methanococcus maripaludis C6    
Methanococcus maripaludis C7    
Methanococcus maripaludis S2    
Methanococcus vannielii SB    
Methanocorpusculum labreanum Z    
Methanoculleus marisnigri JR1    
Methanopyrus kandleri AV19    
Methanosaeta thermophila PT    
Methanosarcina acetivorans C2A    
Methanosarcina barkeri str. fusaro chromosome 1    
Methanosarcina mazei Go1    
Methanosphaera stadtmanae DSM 3091    
Methanospirillum hungatei JF-1    
Methanothermobacter thermautotrophicus str. Delta H    
Methylacidiphilum infernorum V4    
Methylibium petroleiphilum PM1 plasmid RPME01    
Methylobacillus flagellatus KT    
Methylobacterium chloromethanicum CM4 plasmid pMCHL02    
Methylobacterium extorquens PA1    
Methylobacterium nodulans ORS 2060 plasmid pMNOD04    
Methylobacterium populi BJ001 plasmid pMPOP01    
Methylobacterium radiotolerans JCM 2831 plasmid pMRAD05    
Methylobacterium sp. 4-46    
Methylocella silvestris BL2    
Methylococcus capsulatus str. Bath    
Microcystis aeruginosa NIES-843    
Moorella thermoacetica ATCC 39073    
Mycobacterium abscessus chromosome 1    
Mycobacterium avium 104    
Mycobacterium avium subsp. paratuberculosis K-10    
Mycobacterium bovis AF2122/97    
Mycobacterium bovis BCG str. Pasteur 1173P2    
Mycobacterium bovis BCG str. Tokyo 172    
Mycobacterium gilvum PYR-GCK plasmid pMFLV03    
Mycobacterium leprae Br4923    
Mycobacterium leprae TN    
Mycobacterium marinum M    
Mycobacterium smegmatis str. MC2 155    
Mycobacterium sp. JLS    
Mycobacterium sp. KMS    
Mycobacterium sp. MCS plasmid1    
Mycobacterium tuberculosis CDC1551    
Mycobacterium tuberculosis F11    
Mycobacterium tuberculosis H37Ra    
Mycobacterium tuberculosis H37Rv    
Mycobacterium ulcerans Agy99    
Mycobacterium vanbaalenii PYR-1    
Mycoplasma agalactiae PG2    
Mycoplasma arthritidis 158L3-1    
Mycoplasma capricolum subsp. capricolum ATCC 27343    
Mycoplasma gallisepticum R    
Mycoplasma genitalium G37    
Mycoplasma hyopneumoniae 232    
Mycoplasma hyopneumoniae 7448    
Mycoplasma hyopneumoniae J    
Mycoplasma mobile 163K    
Mycoplasma mycoides subsp. mycoides SC str. PG1    
Mycoplasma penetrans HF-2    
Mycoplasma pneumoniae M129    
Mycoplasma pulmonis UAB CTIP    
Mycoplasma synoviae 53    
Myxococcus xanthus DK 1622    
Parabacteroides distasonis ATCC 8503    
Paracoccus denitrificans PD1222 plasmid 1    
Parvibaculum lavamentivorans DS-1    
Pasteurella multocida subsp. multocida str. Pm70    
Pediococcus pentosaceus ATCC 25745    
Pelobacter carbinolicus DSM 2380    
Pelobacter propionicus DSM 2379    
Pelodictyon luteolum DSM 273    
Pelodictyon phaeoclathratiforme BU-1    
Pelotomaculum thermopropionicum SI    
Petrotoga mobilis SJ95    
Phenylobacterium zucineum HLK1    
Photobacterium profundum SS9 chromosome 2    
Photorhabdus luminescens subsp. laumondii TTO1    
Picrophilus torridus DSM 9790    
Polaromonas naphthalenivorans CJ2    
Polaromonas sp. JS666 plasmid 2    
Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1    
Polynucleobacter necessarius subsp. necessarius STIR1    
Porphyromonas gingivalis ATCC 33277    
Porphyromonas gingivalis W83    
Prochlorococcus marinus str. AS9601    
Prochlorococcus marinus str. MIT 9211    
Prochlorococcus marinus str. MIT 9215    
Prochlorococcus marinus str. MIT 9301    
Prochlorococcus marinus str. MIT 9303    
Prochlorococcus marinus str. MIT 9312    
Prochlorococcus marinus str. MIT 9313    
Prochlorococcus marinus str. MIT 9515    
Prochlorococcus marinus str. NATL1A    
Prochlorococcus marinus str. NATL2A    
Prochlorococcus marinus subsp. marinus str. CCMP1375    
Prochlorococcus marinus subsp. pastoris str. CCMP1986    
Propionibacterium acnes KPA171202    
Prosthecochloris aestuarii DSM 271 plasmid pPAES01    
Prosthecochloris vibrioformis DSM 265    
Proteus mirabilis plasmid pHI4320    
Pseudoalteromonas atlantica T6c    
Pseudoalteromonas haloplanktis TAC125 chromosome II    
Pseudomonas aeruginosa LESB58    
Pseudomonas aeruginosa PA7    
Pseudomonas aeruginosa PAO1    
Pseudomonas aeruginosa UCBPP-PA14    
Pseudomonas entomophila L48    
Pseudomonas fluorescens Pf-5    
Pseudomonas fluorescens Pf0-1    
Pseudomonas mendocina ymp    
Pseudomonas putida F1    
Pseudomonas putida GB-1    
Pseudomonas putida KT2440    
Pseudomonas putida W619    
Pseudomonas stutzeri A1501    
Pseudomonas syringae pv. phaseolicola 1448A small plasmid    
Pseudomonas syringae pv. syringae B728a    
Pseudomonas syringae pv. tomato str. DC3000 plasmid pDC3000A    
Psychrobacter arcticus 273-4    
Psychrobacter cryohalolentis K5    
Psychrobacter sp. PRwf-1    
Psychromonas ingrahamii 37    
Pyrobaculum aerophilum str. IM2    
Pyrobaculum arsenaticum DSM 13514    
Pyrobaculum calidifontis JCM 11548    
Pyrobaculum islandicum DSM 4184    
Pyrococcus abyssi GE5 plasmid pGT5    
Pyrococcus furiosus DSM 3638    
Pyrococcus horikoshii OT3    
No Q organisms currently exist in the TransTermHP database
Ralstonia eutropha H16 chromosome 2    
Ralstonia eutropha JMP134 chromosome 2    
Ralstonia metallidurans CH34 chromosome 2    
Ralstonia pickettii 12J plasmid pRPIC01    
Ralstonia solanacearum GMI1000 plasmid pGMI1000MP    
Renibacterium salmoninarum ATCC 33209    
Rhizobium etli CFN 42 plasmid p42f    
Rhizobium etli CIAT 652 plasmid pA    
Rhizobium leguminosarum bv. trifolii WSM2304 plasmid pRLG204    
Rhizobium leguminosarum bv. viciae 3841 plasmid pRL11    
Rhodobacter sphaeroides 2.4.1 plasmid E    
Rhodobacter sphaeroides ATCC 17025 plasmid pRSPA05    
Rhodobacter sphaeroides ATCC 17029 chromosome 2    
Rhodobacter sphaeroides KD131 chromosome 1    
Rhodococcus jostii RHA1 plasmid pRHL3    
Rhodoferax ferrireducens T118    
Rhodopirellula baltica SH 1    
Rhodopseudomonas palustris BisA53    
Rhodopseudomonas palustris BisB18    
Rhodopseudomonas palustris BisB5    
Rhodopseudomonas palustris CGA009 plasmid pRPA    
Rhodopseudomonas palustris HaA2    
Rhodopseudomonas palustris TIE-1    
Rhodospirillum centenum SW    
Rhodospirillum rubrum ATCC 11170    
Rickettsia akari str. Hartford    
Rickettsia bellii OSU 85-389    
Rickettsia bellii RML369-C    
Rickettsia canadensis str. McKiel    
Rickettsia conorii str. Malish 7    
Rickettsia felis URRWXCal2 plasmid pRFdelta    
Rickettsia massiliae MTU5    
Rickettsia prowazekii str. Madrid E    
Rickettsia rickettsii str. Iowa    
Rickettsia rickettsii str. Sheila Smith    
Rickettsia typhi str. Wilmington    
Roseiflexus castenholzii DSM 13941    
Roseiflexus sp. RS-1    
Roseobacter denitrificans plasmid pTB4    
Rubrobacter xylanophilus DSM 9941    
Saccharophagus degradans 2-40    
Saccharopolyspora erythraea NRRL 2338    
Salinibacter ruber DSM 13855 plasmid pSR35    
Salinispora arenicola CNS-205    
Salinispora tropica CNB-440    
Salmonella enterica subsp. arizonae serovar 62:z4    
Salmonella enterica subsp. enterica serovar Agona str. SL483    
Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67    
Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853    
Salmonella enterica subsp. enterica serovar Enteritidis str. P125109    
Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91    
Salmonella enterica subsp. enterica serovar Heidelberg str. SL476    
Salmonella enterica subsp. enterica serovar Newport str. SL254    
Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601    
Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150    
Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7    
Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594    
Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM196    
Salmonella enterica subsp. enterica serovar Typhi str. CT18 plasmid pH    
Salmonella enterica subsp. enterica serovar Typhi Ty2    
Salmonella typhimurium LT2 plasmid pSLT    
Serratia proteamaculans 568    
Shewanella amazonensis SB2B    
Shewanella baltica OS155    
Shewanella baltica OS185    
Shewanella baltica OS195 plasmid pS19503    
Shewanella baltica OS223 plasmid pS22302    
Shewanella denitrificans OS217    
Shewanella frigidimarina NCIMB 400    
Shewanella halifaxensis HAW-EB4    
Shewanella loihica PV-4    
Shewanella oneidensis MR-1 plasmid pMR-1    
Shewanella pealeana ATCC 700345    
Shewanella piezotolerans WP3    
Shewanella putrefaciens CN-32    
Shewanella sediminis HAW-EB3    
Shewanella sp. ANA-3 chromosome 1    
Shewanella sp. MR-4    
Shewanella sp. MR-7    
Shewanella sp. W3-18-1    
Shewanella woodyi ATCC 51908    
Shigella boydii CDC 3083-94 plasmid pBS512_7    
Shigella boydii Sb227    
Shigella dysenteriae Sd197 plasmid pSD197_spA    
Shigella flexneri 2a str. 2457T    
Shigella flexneri 2a str. 301 plasmid pCP301    
Shigella flexneri 5 str. 8401    
Shigella sonnei Ss046 plasmid pSS046_spC    
Silicibacter pomeroyi DSS-3 megaplasmid    
Silicibacter sp. TM1040    
Sinorhizobium medicae WSM419    
Sinorhizobium meliloti 1021 plasmid pSymB    
Sodalis glossinidius str. morsitans plasmid pSG3    
Solibacter usitatus Ellin6076    
Sorangium cellulosum So ce 56    
Sphingomonas wittichii RW1    
Sphingopyxis alaskensis RB2256    
Staphylococcus aureus RF122    
Staphylococcus aureus subsp. aureus COL plasmid pT181    
Staphylococcus aureus subsp. aureus JH1    
Staphylococcus aureus subsp. aureus JH9    
Staphylococcus aureus subsp. aureus MRSA252    
Staphylococcus aureus subsp. aureus MSSA476 plasmid pSAS    
Staphylococcus aureus subsp. aureus Mu3    
Staphylococcus aureus subsp. aureus Mu50 plasmid VRSAp    
Staphylococcus aureus subsp. aureus MW2    
Staphylococcus aureus subsp. aureus N315 plasmid pN315    
Staphylococcus aureus subsp. aureus NCTC 8325    
Staphylococcus aureus subsp. aureus str. Newman    
Staphylococcus aureus subsp. aureus USA300    
Staphylococcus aureus subsp. aureus USA300_TCH1516    
Staphylococcus carnosus subsp. carnosus TM300    
Staphylococcus epidermidis ATCC 12228 plasmid pSE-12228-01    
Staphylococcus epidermidis RP62A plasmid pSERP    
Staphylococcus haemolyticus JCSC1435 plasmid pSHaeC    
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 plasmid p    
Staphylothermus marinus F1    
Stenotrophomonas maltophilia K279a    
Stenotrophomonas maltophilia R551-3    
Streptococcus agalactiae 2603V/R    
Streptococcus agalactiae A909    
Streptococcus agalactiae NEM316    
Streptococcus equi subsp. zooepidemicus MGCS10565    
Streptococcus gordonii str. Challis substr. CH1    
Streptococcus mutans UA159    
Streptococcus pneumoniae ATCC 700669    
Streptococcus pneumoniae CGSP14    
Streptococcus pneumoniae D39    
Streptococcus pneumoniae G54    
Streptococcus pneumoniae Hungary19A-6    
Streptococcus pneumoniae R6    
Streptococcus pneumoniae TIGR4    
Streptococcus pyogenes M1 GAS    
Streptococcus pyogenes MGAS10270    
Streptococcus pyogenes MGAS10394    
Streptococcus pyogenes MGAS10750    
Streptococcus pyogenes MGAS2096    
Streptococcus pyogenes MGAS315    
Streptococcus pyogenes MGAS5005    
Streptococcus pyogenes MGAS6180    
Streptococcus pyogenes MGAS8232    
Streptococcus pyogenes MGAS9429    
Streptococcus pyogenes NZ131    
Streptococcus pyogenes SSI-1    
Streptococcus pyogenes str. Manfredo    
Streptococcus sanguinis SK36    
Streptococcus suis 05ZYH33    
Streptococcus suis 98HAH33    
Streptococcus thermophilus CNRZ1066    
Streptococcus thermophilus LMD-9    
Streptococcus thermophilus LMG 18311    
Streptococcus uberis 0140J    
Streptomyces avermitilis MA-4680 plasmid SAP1    
Streptomyces coelicolor A3(2) plasmid SCP2    
Streptomyces griseus subsp. griseus NBRC 13350    
Sulfolobus acidocaldarius DSM 639    
Sulfolobus solfataricus P2    
Sulfolobus tokodaii str. 7    
Sulfurihydrogenibium sp. YO3AOP1    
Sulfurimonas denitrificans DSM 1251    
Sulfurovum sp. NBC37-1    
Symbiobacterium thermophilum IAM 14863    
Synechococcus elongatus PCC 6301    
Synechococcus elongatus PCC 7942    
Synechococcus sp. CC9311    
Synechococcus sp. CC9605    
Synechococcus sp. CC9902    
Synechococcus sp. JA-2-3Ba(2-13)    
Synechococcus sp. JA-3-3Ab    
Synechococcus sp. PCC 7002 plasmid pAQ6    
Synechococcus sp. RCC307    
Synechococcus sp. WH 7803    
Synechococcus sp. WH 8102    
Synechocystis sp. PCC 6803 plasmid pSYSX    
Syntrophobacter fumaroxidans MPOB    
Syntrophomonas wolfei subsp. wolfei str. Goettingen    
Syntrophus aciditrophicus SB    
Acaryochloris marina MBIC11017 plasmid pREB9    
Acholeplasma laidlawii PG-8A    
Acidiphilium cryptum JF-5    
Acidithiobacillus ferrooxidans ATCC 23270    
Acidithiobacillus ferrooxidans ATCC 53993    
Acidobacteria bacterium Ellin345    
Acidothermus cellulolyticus 11B    
Acidovorax avenae subsp. citrulli AAC00-1    
Acidovorax sp. JS42    
Acinetobacter baumannii    
Acinetobacter baumannii AB0057    
Acinetobacter baumannii AB307-0294    
Acinetobacter baumannii ACICU    
Acinetobacter baumannii ATCC 17978    
Acinetobacter baumannii AYE    
Acinetobacter sp. ADP1    
Actinobacillus pleuropneumoniae L20    
Actinobacillus pleuropneumoniae serovar 3 str. JL03    
Actinobacillus pleuropneumoniae serovar 7 str. AP76 plasmid APP7_A    
Actinobacillus succinogenes 130Z    
Aeromonas hydrophila subsp. hydrophila ATCC 7966    
Aeromonas salmonicida subsp. salmonicida A449 plasmid pAsa5    
Aeropyrum pernix K1    
Agrobacterium radiobacter K84 plasmid pAgK84    
Agrobacterium tumefaciens str. C58 plasmid Ti    
Agrobacterium vitis S4 plasmid pAtS4b    
Akkermansia muciniphila ATCC BAA-835    
Alcanivorax borkumensis SK2    
Aliivibrio salmonicida LFI1238 plasmid pVSAL43    
Alkalilimnicola ehrlichei MLHE-1    
Alkaliphilus metalliredigens QYMF    
Alkaliphilus oremlandii OhILAs    
Alteromonas macleodii Deep ecotype    
Anabaena variabilis ATCC 29413    
Anaerocellum thermophilum DSM 6725 plasmid pATHE02    
Anaeromyxobacter dehalogenans 2CP-1    
Anaeromyxobacter dehalogenans 2CP-C    
Anaeromyxobacter sp. Fw109-5    
Anaeromyxobacter sp. K    
Anaplasma marginale str. Florida    
Anaplasma marginale str. St. Maries    
Anaplasma phagocytophilum HZ    
Anoxybacillus flavithermus WK1    
Aquifex aeolicus VF5 plasmid ece1    
Archaeoglobus fulgidus DSM 4304    
Arcobacter butzleri RM4018    
Arthrobacter aurescens TC1 plasmid TC2    
Arthrobacter chlorophenolicus A6    
Arthrobacter sp. FB24 chromosome 1    
Aster yellows witches-broom phytoplasma AYWB plasmid pAYWB-IV    
Azoarcus sp. BH72    
Azoarcus sp. EbN1 plasmid 2    
Azorhizobium caulinodans ORS 571    
Bacillus amyloliquefaciens FZB42    
Bacillus anthracis str. Ames    
Bacillus anthracis str. Ames Ancestor    
Bacillus anthracis str. Sterne    
Bacillus cereus AH187    
Bacillus cereus AH820 plasmid pAH820_272    
Bacillus cereus ATCC 10987 plasmid pBc10987    
Bacillus cereus ATCC 14579    
Bacillus cereus B4264    
Bacillus cereus E33L plasmid pE33L9    
Bacillus cereus G9842 plasmid pG9842_209    
Bacillus cereus Q1 plasmid pBc239    
Bacillus cereus subsp. cytotoxis NVH 391-98    
Bacillus clausii KSM-K16    
Bacillus halodurans C-125    
Bacillus licheniformis ATCC 14580    
Bacillus licheniformis ATCC 14580    
Bacillus pumilus SAFR-032    
Bacillus subtilis subsp. subtilis str. 168    
Bacillus thuringiensis serovar konkukian str. 97-27 plasmid pBT9727    
Bacillus thuringiensis str. Al Hakam    
Bacillus weihenstephanensis KBAB4    
Bacteroides fragilis NCTC 9343 plasmid pBF9343    
Bacteroides fragilis YCH46    
Bacteroides thetaiotaomicron VPI-5482 plasmid p5482    
Bacteroides vulgatus ATCC 8482    
Bartonella bacilliformis KC583    
Bartonella henselae str. Houston-1    
Bartonella quintana str. Toulouse    
Bartonella tribocorum CIP 105476    
Baumannia cicadellinicola str. Hc (Homalodisca coagulata)    
Bdellovibrio bacteriovorus HD100    
Beijerinckia indica subsp. indica ATCC 9039    
Bifidobacterium adolescentis ATCC 15703    
Bifidobacterium animalis subsp. lactis AD011    
Bifidobacterium longum DJO10A    
Bifidobacterium longum NCC2705 plasmid pBLO1    
Bifidobacterium longum subsp. infantis ATCC 15697    
Bordetella avium 197N    
Bordetella bronchiseptica RB50    
Bordetella parapertussis 12822    
Bordetella pertussis Tohama I    
Bordetella petrii DSM 12804    
Borrelia afzelii PKo plasmid lp25    
Borrelia burgdorferi B31 plasmid cp9    
Borrelia burgdorferi ZS7 plasmid ZS7_lp28-4    
Borrelia duttonii Ly plasmid pl27    
Borrelia garinii PBi    
Borrelia hermsii DAH    
Borrelia recurrentis A1 plasmid pl6    
Borrelia turicatae 91E135    
Bradyrhizobium japonicum USDA 110    
Bradyrhizobium sp. BTAi1    
Bradyrhizobium sp. ORS278    
Brucella abortus biovar 1 str. 9-941 chromosome II    
Brucella abortus S19 chromosome 1    
Brucella canis ATCC 23365 chromosome II    
Brucella melitensis 16M chromosome II    
Brucella melitensis biovar Abortus 2308 chromosome II    
Brucella ovis ATCC 25840 chromosome I    
Brucella suis 1330 chromosome II    
Brucella suis ATCC 23445 chromosome I    
Buchnera aphidicola (Cinara cedri) plasmid pLeu-BCc    
Buchnera aphidicola str. 5A (Acyrthosiphon pisum)    
Buchnera aphidicola str. APS (Acyrthosiphon pisum)    
Buchnera aphidicola str. Bp (Baizongia pistaciae) plasmid pBBp1    
Buchnera aphidicola str. Sg (Schizaphis graminum)    
Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)    
Burkholderia ambifaria MC40-6 chromosome 3    
Burkholderia cenocepacia AU 1054 chromosome 3    
Burkholderia cenocepacia HI2424 plasmid 1    
Burkholderia cenocepacia J2315 plasmid pBCJ2315    
Burkholderia cenocepacia MC0-3 chromosome 2    
Burkholderia cepacia AMMD chromosome 3    
Burkholderia mallei ATCC 23344 chromosome 2    
Burkholderia mallei NCTC 10229 chromosome I    
Burkholderia mallei NCTC 10247 chromosome I    
Burkholderia mallei SAVP1 chromosome I    
Burkholderia multivorans ATCC 17616 chromosome 2    
Burkholderia multivorans ATCC 17616 chromosome 3    
Burkholderia phymatum STM815 plasmid pBPHY02    
Burkholderia phytofirmans PsJN chromosome 1    
Burkholderia pseudomallei 1106a chromosome II    
Burkholderia pseudomallei 1710b chromosome II    
Burkholderia pseudomallei 668 chromosome II    
Burkholderia pseudomallei K96243 chromosome 2    
Burkholderia sp. 383 chromosome 2    
Burkholderia thailandensis E264 chromosome I    
Burkholderia vietnamiensis G4 chromosome 1    
Burkholderia xenovorans LB400 chromosome 3    
Caldicellulosiruptor saccharolyticus DSM 8903    
Caldivirga maquilingensis IC-167    
Campylobacter concisus 13826    
Campylobacter curvus 525.92    
Campylobacter fetus subsp. fetus 82-40    
Campylobacter hominis ATCC BAA-381    
Campylobacter jejuni RM1221    
Campylobacter jejuni subsp. doylei 269.97    
Campylobacter jejuni subsp. jejuni 81-176 plasmid pTet    
Campylobacter jejuni subsp. jejuni 81116    
Campylobacter jejuni subsp. jejuni NCTC 11168    
Campylobacter lari RM2100 megaplasmid pCL2100    
Candidatus Amoebophilus asiaticus 5a2    
Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2    
Candidatus Blochmannia floridanus    
Candidatus Blochmannia pennsylvanicus str. BPEN    
Candidatus Carsonella ruddii PV    
Candidatus Desulfococcus oleovorans Hxd3    
Candidatus Desulforudis audaxviator MP104C    
Candidatus Korarchaeum cryptofilum OPF8    
Candidatus Methanoregula boonei 6A8    
Candidatus Methanosphaerula palustris E1-9c    
Candidatus Pelagibacter ubique HTCC1062    
Candidatus Phytoplasma australiense    
Candidatus Phytoplasma mali    
Candidatus Protochlamydia amoebophila UWE25    
Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)    
Candidatus Sulcia muelleri GWSS    
Candidatus Vesicomyosocius okutanii HA    
Carboxydothermus hydrogenoformans Z-2901    
Caulobacter crescentus CB15    
Caulobacter crescentus NA1000    
Caulobacter sp. K31    
Cellvibrio japonicus Ueda107    
Chlamydia muridarum Nigg    
Chlamydia trachomatis 434/Bu    
Chlamydia trachomatis A/HAR-13 plasmid pCTA    
Chlamydia trachomatis D/UW-3/CX    
Chlamydia trachomatis L2b/UCH-1/proctitis    
Chlamydophila abortus S26/3    
Chlamydophila caviae GPIC plasmid pCpGP1    
Chlamydophila felis Fe/C-56 plasmid pCfe1    
Chlamydophila pneumoniae AR39    
Chlamydophila pneumoniae CWL029    
Chlamydophila pneumoniae J138    
Chlamydophila pneumoniae TW-183    
Chlorobaculum parvum NCIB 8327    
Chlorobium chlorochromatii CaD3    
Chlorobium limicola DSM 245    
Chlorobium phaeobacteroides BS1    
Chlorobium phaeobacteroides DSM 266    
Chlorobium tepidum TLS    
Chloroflexus aggregans DSM 9485    
Chloroflexus aurantiacus J-10-fl    
Chloroflexus sp. Y-400-fl    
Chloroherpeton thalassium ATCC 35110    
Chromobacterium violaceum ATCC 12472    
Chromohalobacter salexigens DSM 3043    
Citrobacter koseri ATCC BAA-895 plasmid pCKO2    
Clavibacter michiganensis subsp. michiganensis NCPPB 382    
Clavibacter michiganensis subsp. sepedonicus plasmid pCSL1    
Clostridium acetobutylicum ATCC 824    
Clostridium beijerinckii NCIMB 8052    
Clostridium botulinum A str. ATCC 19397    
Clostridium botulinum A str. ATCC 3502 plasmid pBOT3502    
Clostridium botulinum A str. Hall    
Clostridium botulinum A3 str. Loch Maree    
Clostridium botulinum B str. Eklund 17B plasmid pCLL    
Clostridium botulinum B1 str. Okra    
Clostridium botulinum E3 str. Alaska E43    
Clostridium botulinum F str. Langeland plasmid pCLI    
Clostridium cellulolyticum H10    
Clostridium difficile 630    
Clostridium kluyveri DSM 555    
Clostridium kluyveri NBRC 12016    
Clostridium novyi NT    
Clostridium perfringens ATCC 13124    
Clostridium perfringens str. 13    
Clostridium phage phiSM101    
Clostridium phytofermentans ISDg    
Clostridium tetani E88 plasmid pE88    
Clostridium thermocellum ATCC 27405    
Colwellia psychrerythraea 34H    
Coprothermobacter proteolyticus DSM 5265    
Corynebacterium diphtheriae NCTC 13129    
Corynebacterium efficiens YS-314    
Corynebacterium glutamicum ATCC 13032    
Corynebacterium glutamicum ATCC 13032    
Corynebacterium glutamicum R plasmid pCGR1    
Corynebacterium jeikeium K411    
Corynebacterium urealyticum DSM 7109    
Coxiella burnetii CbuG_Q212    
Coxiella burnetii CbuK_Q154    
Coxiella burnetii Dugway 5J108-111    
Coxiella burnetii RSA 331    
Coxiella burnetii RSA 493 plasmid pQpH1    
Cupriavidus taiwanensis    
Cyanothece sp. ATCC 51142 chromosome linear    
Cyanothece sp. PCC 7424 plasmid pP742401    
Cyanothece sp. PCC 7425 plasmid pP742502    
Cyanothece sp. PCC 8801 plasmid pP880103    
Cytophaga hutchinsonii ATCC 33406    
Dechloromonas aromatica RCB    
Dehalococcoides ethenogenes 195    
Dehalococcoides sp. BAV1    
Dehalococcoides sp. CBDB1    
Deinococcus geothermalis DSM 11300 plasmid pDGEO02    
Deinococcus radiodurans R1 chromosome 2    
Delftia acidovorans SPH-1    
Desulfatibacillum alkenivorans AK-01    
Desulfitobacterium hafniense DCB-2    
Desulfitobacterium hafniense Y51    
Desulfobacterium autotrophicum HRM2 plasmid pHRM2a    
Desulfotalea psychrophila LSv54 plasmid small    
Desulfotomaculum reducens MI-1    
Desulfovibrio desulfuricans G20    
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774    
Desulfovibrio vulgaris str. Miyazaki F    
Desulfovibrio vulgaris subsp. vulgaris DP4    
Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough megaplasmid    
Desulfurococcus kamchatkensis 1221n    
Diaphorobacter sp. TPSY    
Dichelobacter nodosus VCS1703A    
Dictyoglomus thermophilum H-6-12    
Dictyoglomus turgidum DSM 6724    
Escherichia coli S88    
Escherichia coli SE11 plasmid pSE11-1    
Escherichia coli SMS-3-5    
Escherichia coli UMN026    
Escherichia coli UTI89    
Escherichia fergusonii ATCC 35469 plasmid pEFER    
Exiguobacterium sibiricum 255-15    
Fervidobacterium nodosum Rt17-B1    
Finegoldia magna ATCC 29328    
Flavobacterium johnsoniae UW101    
Flavobacterium psychrophilum JIP02/86    
Francisella philomiragia subsp. philomiragia ATCC 25017    
Francisella tularensis subsp. holarctica    
Francisella tularensis subsp. holarctica FTNF002-00    
Francisella tularensis subsp. holarctica OSU18    
Francisella tularensis subsp. mediasiatica FSC147    
Francisella tularensis subsp. novicida U112    
Francisella tularensis subsp. tularensis FSC198    
Francisella tularensis subsp. tularensis Schu 4    
Francisella tularensis subsp. tularensis WY96-3418    
Frankia alni ACN14a    
Frankia sp. CcI3    
Frankia sp. EAN1pec    
Fusobacterium nucleatum subsp. nucleatum ATCC 25586    
Geobacillus kaustophilus HTA426    
Geobacillus thermodenitrificans NG80-2 plasmid pLW1071    
Geobacter bemidjiensis Bem    
Geobacter lovleyi SZ plasmid pGLOV01    
Geobacter metallireducens GS-15    
Geobacter sp. FRC-32    
Geobacter sulfurreducens PCA    
Geobacter uraniireducens Rf4    
Gloeobacter violaceus PCC 7421    
Gluconacetobacter diazotrophicus PAl 5    
Gluconacetobacter diazotrophicus PAl 5 plasmid pGDIA01    
Gluconobacter oxydans 621H    
Gramella forsetii KT0803    
Granulibacter bethesdensis CGDNIH1    
Haemophilus ducreyi 35000HP    
Haemophilus influenzae 86-028NP    
Haemophilus influenzae PittEE    
Haemophilus influenzae PittGG    
Haemophilus influenzae Rd KW20    
Haemophilus parasuis SH0165    
Haemophilus somnus 129PT    
Haemophilus somnus 2336    
Hahella chejuensis KCTC 2396    
Haloarcula marismortui ATCC 43049 chromosome II    
Halobacterium salinarum R1 plasmid PHS2    
Halobacterium sp. NRC-1 plasmid pNRC200    
Haloquadratum walsbyi DSM 16790 plasmid PL47    
Halorhodospira halophila SL1    
Halorubrum lacusprofundi ATCC 49239 plasmid pHLAC01    
Halothermothrix orenii H 168    
Helicobacter acinonychis str. Sheeba plasmid pHac1    
Helicobacter hepaticus ATCC 51449    
Helicobacter pylori 26695    
Helicobacter pylori G27 plasmid pHPG27    
Helicobacter pylori HPAG1 plasmid pHPAG1    
Helicobacter pylori J99    
Helicobacter pylori P12 plasmid HPP12    
Helicobacter pylori Shi470    
Heliobacterium modesticaldum Ice1    
Herminiimonas arsenicoxydans    
Herpetosiphon aurantiacus ATCC 23779 plasmid pHAU02    
Hydrogenobaculum sp. Y04AAS1    
Hyperthermus butylicus DSM 5456    
Hyphomonas neptunium ATCC 15444    
Idiomarina loihiensis L2TR    
Ignicoccus hospitalis KIN4/I    
Jannaschia sp. CCS1    
Janthinobacterium sp. Marseille    
Kineococcus radiotolerans SRS30216 plasmid pKRAD01    
Klebsiella pneumoniae 342    
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 plasmid pKPN7    
Kocuria rhizophila DC2201    
Lactobacillus acidophilus NCFM    
Lactobacillus brevis ATCC 367 plasmid 2    
Lactobacillus casei    
Lactobacillus casei ATCC 334    
Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842    
Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365    
Lactobacillus fermentum IFO 3956    
Lactobacillus gasseri ATCC 33323    
Lactobacillus helveticus DPC 4571    
Lactobacillus johnsonii NCC 533    
Lactobacillus plantarum WCFS1 plasmid pWCFS103    
Lactobacillus reuteri DSM 20016    
Lactobacillus reuteri JCM 1112    
Lactobacillus sakei subsp. sakei 23K    
Lactobacillus salivarius UCC118 plasmid pMP118    
Lactococcus lactis subsp. cremoris MG1363    
Lactococcus lactis subsp. cremoris SK11    
Lactococcus lactis subsp. lactis Il1403    
Lawsonia intracellularis PHE/MN1-00 plasmid 3    
Legionella pneumophila str. Corby    
Legionella pneumophila str. Lens    
Legionella pneumophila str. Paris    
Legionella pneumophila subsp. pneumophila str. Philadelphia 1    
Leifsonia xyli subsp. xyli str. CTCB07    
Leptospira biflexa serovar Patoc strain Patoc 1 (Ames) plasmid p74    
Leptospira biflexa serovar Patoc strain Patoc 1 (Paris) plasmid p74    
Leptospira borgpetersenii serovar Hardjo-bovis JB197 chromosome 2    
Leptospira borgpetersenii serovar Hardjo-bovis L550 chromosome 2    
Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130 chromos    
Leptospira interrogans serovar Lai str. 56601 chromosome II    
Leptothrix cholodnii SP-6    
Leuconostoc citreum KM20    
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293    
Listeria innocua Clip11262 plasmid pLI100    
Listeria monocytogenes EGD-e    
Listeria monocytogenes HCC23    
Listeria monocytogenes str. 4b F2365    
Listeria welshimeri serovar 6b str. SLCC5334    
Lysinibacillus sphaericus C3-41    
Macrococcus caseolyticus JCSC5402 plasmid pMCCL8    
Magnetococcus sp. MC-1    
Magnetospirillum magneticum AMB-1    
Mannheimia succiniciproducens MBEL55E    
Maricaulis maris MCS10    
Marinobacter aquaeolei VT8    
Marinomonas sp. MWYL1    
Mesoplasma florum L1    
Mesorhizobium loti MAFF303099 plasmid pMLb    
Mesorhizobium sp. BNC1    
Metallosphaera sedula DSM 5348    
Methanobrevibacter smithii ATCC 35061    
Methanocaldococcus jannaschii DSM 2661 extrachromosomal    
Methanococcoides burtonii DSM 6242    
Methanococcus aeolicus Nankai-3    
Methanococcus maripaludis C5 plasmid pMMC501    
Methanococcus maripaludis C6    
Methanococcus maripaludis C7    
Methanococcus maripaludis S2    
Methanococcus vannielii SB    
Methanocorpusculum labreanum Z    
Methanoculleus marisnigri JR1    
Methanopyrus kandleri AV19    
Methanosaeta thermophila PT    
Methanosarcina acetivorans C2A    
Methanosarcina barkeri str. fusaro chromosome 1    
Methanosarcina mazei Go1    
Methanosphaera stadtmanae DSM 3091    
Methanospirillum hungatei JF-1    
Methanothermobacter thermautotrophicus str. Delta H    
Methylacidiphilum infernorum V4    
Methylibium petroleiphilum PM1 plasmid RPME01    
Methylobacillus flagellatus KT    
Methylobacterium chloromethanicum CM4 plasmid pMCHL02    
Methylobacterium extorquens PA1    
Methylobacterium nodulans ORS 2060 plasmid pMNOD04    
Methylobacterium populi BJ001 plasmid pMPOP01    
Methylobacterium radiotolerans JCM 2831 plasmid pMRAD05    
Methylobacterium sp. 4-46    
Methylocella silvestris BL2    
Methylococcus capsulatus str. Bath    
Microcystis aeruginosa NIES-843    
Moorella thermoacetica ATCC 39073    
Mycobacterium abscessus chromosome 1    
Mycobacterium avium 104    
Mycobacterium avium subsp. paratuberculosis K-10    
Mycobacterium bovis AF2122/97    
Mycobacterium bovis BCG str. Pasteur 1173P2    
Mycobacterium bovis BCG str. Tokyo 172    
Mycobacterium gilvum PYR-GCK plasmid pMFLV03    
Mycobacterium leprae Br4923    
Mycobacterium leprae TN    
Mycobacterium marinum M    
Mycobacterium smegmatis str. MC2 155    
Mycobacterium sp. JLS    
Mycobacterium sp. KMS    
Mycobacterium sp. MCS plasmid1    
Mycobacterium tuberculosis CDC1551    
Mycobacterium tuberculosis F11    
Mycobacterium tuberculosis H37Ra    
Mycobacterium tuberculosis H37Rv    
Mycobacterium ulcerans Agy99    
Mycobacterium vanbaalenii PYR-1    
Mycoplasma agalactiae PG2    
Mycoplasma arthritidis 158L3-1    
Mycoplasma capricolum subsp. capricolum ATCC 27343    
Mycoplasma gallisepticum R    
Mycoplasma genitalium G37    
Mycoplasma hyopneumoniae 232    
Mycoplasma hyopneumoniae 7448    
Mycoplasma hyopneumoniae J    
Mycoplasma mobile 163K    
Mycoplasma mycoides subsp. mycoides SC str. PG1    
Mycoplasma penetrans HF-2    
Mycoplasma pneumoniae M129    
Mycoplasma pulmonis UAB CTIP    
Mycoplasma synoviae 53    
Myxococcus xanthus DK 1622    
Nanoarchaeum equitans Kin4-M    
Natranaerobius thermophilus JW/NM-WN-LF plasmid pNTHE02    
Natronomonas pharaonis DSM 2160 plasmid PL23    
Nautilia profundicola AmH    
Neisseria gonorrhoeae FA 1090    
Neisseria gonorrhoeae NCCP11945    
Neisseria meningitidis 053442    
Neisseria meningitidis FAM18    
Neisseria meningitidis MC58    
Neisseria meningitidis Z2491    
Neorickettsia sennetsu str. Miyayama    
Nitratiruptor sp. SB155-2    
Nitrobacter hamburgensis X14    
Nitrobacter winogradskyi Nb-255    
Nitrosococcus oceani ATCC 19707    
Nitrosomonas europaea ATCC 19718    
Nitrosomonas eutropha C91    
Nitrosopumilus maritimus SCM1    
Nitrosospira multiformis ATCC 25196 plasmid 3    
Nocardia farcinica IFM 10152 plasmid pNF2    
Nocardioides sp. JS614    
Nostoc punctiforme PCC 73102 plasmid pNPUN04    
Nostoc sp. PCC 7120 plasmid pCC7120alpha    
Novosphingobium aromaticivorans DSM 12444 plasmid pNL2    
Oceanobacillus iheyensis HTE831    
Ochrobactrum anthropi ATCC 49188 plasmid pOANT04    
Oenococcus oeni PSU-1    
Oligotropha carboxidovorans OM5    
Onion yellows phytoplasma OY-M    
Opitutus terrae PB90-1    
Orientia tsutsugamushi Boryong    
Orientia tsutsugamushi str. Ikeda    
Parabacteroides distasonis ATCC 8503    
Paracoccus denitrificans PD1222 plasmid 1    
Parvibaculum lavamentivorans DS-1    
Pasteurella multocida subsp. multocida str. Pm70    
Pediococcus pentosaceus ATCC 25745    
Pelobacter carbinolicus DSM 2380    
Pelobacter propionicus DSM 2379    
Pelodictyon luteolum DSM 273    
Pelodictyon phaeoclathratiforme BU-1    
Pelotomaculum thermopropionicum SI    
Petrotoga mobilis SJ95    
Phenylobacterium zucineum HLK1    
Photobacterium profundum SS9 chromosome 2    
Photorhabdus luminescens subsp. laumondii TTO1    
Picrophilus torridus DSM 9790    
Polaromonas naphthalenivorans CJ2    
Polaromonas sp. JS666 plasmid 2    
Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1    
Polynucleobacter necessarius subsp. necessarius STIR1    
Porphyromonas gingivalis ATCC 33277    
Porphyromonas gingivalis W83    
Prochlorococcus marinus str. AS9601    
Prochlorococcus marinus str. MIT 9211    
Prochlorococcus marinus str. MIT 9215    
Prochlorococcus marinus str. MIT 9301    
Prochlorococcus marinus str. MIT 9303    
Prochlorococcus marinus str. MIT 9312    
Prochlorococcus marinus str. MIT 9313    
Prochlorococcus marinus str. MIT 9515    
Prochlorococcus marinus str. NATL1A    
Prochlorococcus marinus str. NATL2A    
Prochlorococcus marinus subsp. marinus str. CCMP1375    
Prochlorococcus marinus subsp. pastoris str. CCMP1986    
Propionibacterium acnes KPA171202    
Prosthecochloris aestuarii DSM 271 plasmid pPAES01    
Prosthecochloris vibrioformis DSM 265    
Proteus mirabilis plasmid pHI4320    
Pseudoalteromonas atlantica T6c    
Pseudoalteromonas haloplanktis TAC125 chromosome II    
Pseudomonas aeruginosa LESB58    
Pseudomonas aeruginosa PA7    
Pseudomonas aeruginosa PAO1    
Pseudomonas aeruginosa UCBPP-PA14    
Pseudomonas entomophila L48    
Pseudomonas fluorescens Pf-5    
Pseudomonas fluorescens Pf0-1    
Pseudomonas mendocina ymp    
Pseudomonas putida F1    
Pseudomonas putida GB-1    
Pseudomonas putida KT2440    
Pseudomonas putida W619    
Pseudomonas stutzeri A1501    
Pseudomonas syringae pv. phaseolicola 1448A small plasmid    
Pseudomonas syringae pv. syringae B728a    
Pseudomonas syringae pv. tomato str. DC3000 plasmid pDC3000A    
Psychrobacter arcticus 273-4    
Psychrobacter cryohalolentis K5    
Psychrobacter sp. PRwf-1    
Psychromonas ingrahamii 37    
Pyrobaculum aerophilum str. IM2    
Pyrobaculum arsenaticum DSM 13514    
Pyrobaculum calidifontis JCM 11548    
Pyrobaculum islandicum DSM 4184    
Pyrococcus abyssi GE5 plasmid pGT5    
Pyrococcus furiosus DSM 3638    
Pyrococcus horikoshii OT3    
Ralstonia eutropha H16 chromosome 2    
Ralstonia eutropha JMP134 chromosome 2    
Ralstonia metallidurans CH34 chromosome 2    
Ralstonia pickettii 12J plasmid pRPIC01    
Ralstonia solanacearum GMI1000 plasmid pGMI1000MP    
Renibacterium salmoninarum ATCC 33209    
Rhizobium etli CFN 42 plasmid p42f    
Rhizobium etli CIAT 652 plasmid pA    
Rhizobium leguminosarum bv. trifolii WSM2304 plasmid pRLG204    
Rhizobium leguminosarum bv. viciae 3841 plasmid pRL11    
Rhodobacter sphaeroides 2.4.1 plasmid E    
Rhodobacter sphaeroides ATCC 17025 plasmid pRSPA05    
Rhodobacter sphaeroides ATCC 17029 chromosome 2    
Rhodobacter sphaeroides KD131 chromosome 1    
Rhodococcus jostii RHA1 plasmid pRHL3    
Rhodoferax ferrireducens T118    
Rhodopirellula baltica SH 1    
Rhodopseudomonas palustris BisA53    
Rhodopseudomonas palustris BisB18    
Rhodopseudomonas palustris BisB5    
Rhodopseudomonas palustris CGA009 plasmid pRPA    
Rhodopseudomonas palustris HaA2    
Rhodopseudomonas palustris TIE-1    
Rhodospirillum centenum SW    
Rhodospirillum rubrum ATCC 11170    
Rickettsia akari str. Hartford    
Rickettsia bellii OSU 85-389    
Rickettsia bellii RML369-C    
Rickettsia canadensis str. McKiel    
Rickettsia conorii str. Malish 7    
Rickettsia felis URRWXCal2 plasmid pRFdelta    
Rickettsia massiliae MTU5    
Rickettsia prowazekii str. Madrid E    
Rickettsia rickettsii str. Iowa    
Rickettsia rickettsii str. Sheila Smith    
Rickettsia typhi str. Wilmington    
Roseiflexus castenholzii DSM 13941    
Roseiflexus sp. RS-1    
Roseobacter denitrificans plasmid pTB4    
Rubrobacter xylanophilus DSM 9941    
Saccharophagus degradans 2-40    
Saccharopolyspora erythraea NRRL 2338    
Salinibacter ruber DSM 13855 plasmid pSR35    
Salinispora arenicola CNS-205    
Salinispora tropica CNB-440    
Salmonella enterica subsp. arizonae serovar 62:z4    
Salmonella enterica subsp. enterica serovar Agona str. SL483    
Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67    
Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853    
Salmonella enterica subsp. enterica serovar Enteritidis str. P125109    
Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91    
Salmonella enterica subsp. enterica serovar Heidelberg str. SL476    
Salmonella enterica subsp. enterica serovar Newport str. SL254    
Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601    
Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150    
Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7    
Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594    
Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM196    
Salmonella enterica subsp. enterica serovar Typhi str. CT18 plasmid pH    
Salmonella enterica subsp. enterica serovar Typhi Ty2    
Salmonella typhimurium LT2 plasmid pSLT    
Serratia proteamaculans 568    
Shewanella amazonensis SB2B    
Shewanella baltica OS155    
Shewanella baltica OS185    
Shewanella baltica OS195 plasmid pS19503    
Shewanella baltica OS223 plasmid pS22302    
Shewanella denitrificans OS217    
Shewanella frigidimarina NCIMB 400    
Shewanella halifaxensis HAW-EB4    
Shewanella loihica PV-4    
Shewanella oneidensis MR-1 plasmid pMR-1    
Shewanella pealeana ATCC 700345    
Shewanella piezotolerans WP3    
Shewanella putrefaciens CN-32    
Shewanella sediminis HAW-EB3    
Shewanella sp. ANA-3 chromosome 1    
Shewanella sp. MR-4    
Shewanella sp. MR-7    
Shewanella sp. W3-18-1    
Shewanella woodyi ATCC 51908    
Shigella boydii CDC 3083-94 plasmid pBS512_7    
Shigella boydii Sb227    
Shigella dysenteriae Sd197 plasmid pSD197_spA    
Shigella flexneri 2a str. 2457T    
Shigella flexneri 2a str. 301 plasmid pCP301    
Shigella flexneri 5 str. 8401    
Shigella sonnei Ss046 plasmid pSS046_spC    
Silicibacter pomeroyi DSS-3 megaplasmid    
Silicibacter sp. TM1040    
Sinorhizobium medicae WSM419    
Sinorhizobium meliloti 1021 plasmid pSymB    
Sodalis glossinidius str. morsitans plasmid pSG3    
Solibacter usitatus Ellin6076    
Sorangium cellulosum So ce 56    
Sphingomonas wittichii RW1    
Sphingopyxis alaskensis RB2256    
Staphylococcus aureus RF122    
Staphylococcus aureus subsp. aureus COL plasmid pT181    
Staphylococcus aureus subsp. aureus JH1    
Staphylococcus aureus subsp. aureus JH9    
Staphylococcus aureus subsp. aureus MRSA252    
Staphylococcus aureus subsp. aureus MSSA476 plasmid pSAS    
Staphylococcus aureus subsp. aureus Mu3    
Staphylococcus aureus subsp. aureus Mu50 plasmid VRSAp    
Staphylococcus aureus subsp. aureus MW2    
Staphylococcus aureus subsp. aureus N315 plasmid pN315    
Staphylococcus aureus subsp. aureus NCTC 8325    
Staphylococcus aureus subsp. aureus str. Newman    
Staphylococcus aureus subsp. aureus USA300    
Staphylococcus aureus subsp. aureus USA300_TCH1516    
Staphylococcus carnosus subsp. carnosus TM300    
Staphylococcus epidermidis ATCC 12228 plasmid pSE-12228-01    
Staphylococcus epidermidis RP62A plasmid pSERP    
Staphylococcus haemolyticus JCSC1435 plasmid pSHaeC    
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 plasmid p    
Staphylothermus marinus F1    
Stenotrophomonas maltophilia K279a    
Stenotrophomonas maltophilia R551-3    
Streptococcus agalactiae 2603V/R    
Streptococcus agalactiae A909    
Streptococcus agalactiae NEM316    
Streptococcus equi subsp. zooepidemicus MGCS10565    
Streptococcus gordonii str. Challis substr. CH1    
Streptococcus mutans UA159    
Streptococcus pneumoniae ATCC 700669    
Streptococcus pneumoniae CGSP14    
Streptococcus pneumoniae D39    
Streptococcus pneumoniae G54    
Streptococcus pneumoniae Hungary19A-6    
Streptococcus pneumoniae R6    
Streptococcus pneumoniae TIGR4    
Streptococcus pyogenes M1 GAS    
Streptococcus pyogenes MGAS10270    
Streptococcus pyogenes MGAS10394    
Streptococcus pyogenes MGAS10750    
Streptococcus pyogenes MGAS2096    
Streptococcus pyogenes MGAS315    
Streptococcus pyogenes MGAS5005    
Streptococcus pyogenes MGAS6180    
Streptococcus pyogenes MGAS8232    
Streptococcus pyogenes MGAS9429    
Streptococcus pyogenes NZ131    
Streptococcus pyogenes SSI-1    
Streptococcus pyogenes str. Manfredo    
Streptococcus sanguinis SK36    
Streptococcus suis 05ZYH33    
Streptococcus suis 98HAH33    
Streptococcus thermophilus CNRZ1066    
Streptococcus thermophilus LMD-9    
Streptococcus thermophilus LMG 18311    
Streptococcus uberis 0140J    
Streptomyces avermitilis MA-4680 plasmid SAP1    
Streptomyces coelicolor A3(2) plasmid SCP2    
Streptomyces griseus subsp. griseus NBRC 13350    
Sulfolobus acidocaldarius DSM 639    
Sulfolobus solfataricus P2    
Sulfolobus tokodaii str. 7    
Sulfurihydrogenibium sp. YO3AOP1    
Sulfurimonas denitrificans DSM 1251    
Sulfurovum sp. NBC37-1    
Symbiobacterium thermophilum IAM 14863    
Synechococcus elongatus PCC 6301    
Synechococcus elongatus PCC 7942    
Synechococcus sp. CC9311    
Synechococcus sp. CC9605    
Synechococcus sp. CC9902    
Synechococcus sp. JA-2-3Ba(2-13)    
Synechococcus sp. JA-3-3Ab    
Synechococcus sp. PCC 7002 plasmid pAQ6    
Synechococcus sp. RCC307    
Synechococcus sp. WH 7803    
Synechococcus sp. WH 8102    
Synechocystis sp. PCC 6803 plasmid pSYSX    
Syntrophobacter fumaroxidans MPOB    
Syntrophomonas wolfei subsp. wolfei str. Goettingen    
Syntrophus aciditrophicus SB    
Thauera sp. MZ1T plasmid pTha01    
Thermoanaerobacter pseudethanolicus ATCC 33223    
Thermoanaerobacter sp. X514    
Thermoanaerobacter tengcongensis MB4    
Thermobifida fusca YX    
Thermococcus kodakarensis KOD1    
Thermococcus onnurineus NA1    
Thermodesulfovibrio yellowstonii DSM 11347    
Thermofilum pendens Hrk 5    
Thermomicrobium roseum DSM 5159 plasmid unnamed    
Thermoplasma acidophilum DSM 1728    
Thermoplasma volcanium GSS1    
Thermoproteus neutrophilus V24Sta    
Thermosipho africanus TCF52B    
Thermosipho melanesiensis BI429    
Thermosynechococcus elongatus BP-1    
Thermotoga lettingae TMO    
Thermotoga maritima MSB8    
Thermotoga neapolitana DSM 4359    
Thermotoga petrophila RKU-1    
Thermotoga sp. RQ2    
Thermus thermophilus HB27 plasmid pTT27    
Thermus thermophilus HB8 plasmid pTT8    
Thioalkalivibrio sp. HL-EbGR7    
Thiobacillus denitrificans ATCC 25259    
Thiomicrospira crunogena XCL-2    
Treponema denticola ATCC 35405    
Treponema pallidum subsp. pallidum SS14    
Treponema pallidum subsp. pallidum str. Nichols    
Trichodesmium erythraeum IMS101    
Tropheryma whipplei str. Twist    
Tropheryma whipplei TW08/27    
Uncultured methanogenic archaeon RC-I    
Uncultured Termite group 1 bacterium phylotype Rs-D17 plasmid pTGRD3 D    
Ureaplasma parvum serovar 3 str. ATCC 27815    
Ureaplasma parvum serovar 3 str. ATCC 700970    
Ureaplasma urealyticum serovar 10 str. ATCC 33699    
Verminephrobacter eiseniae EF01-2    
Vibrio cholerae O1 biovar eltor str. N16961 chromosome II    
Vibrio cholerae O395 chromosome 2    
Vibrio fischeri ES114 plasmid pES100    
Vibrio fischeri MJ11 chromosome II    
Vibrio harveyi ATCC BAA-1116 chromosome II    
Vibrio parahaemolyticus RIMD 2210633 chromosome II    
Vibrio splendidus LGP32 chromosome 1    
Vibrio vulnificus CMCP6 chromosome II    
Vibrio vulnificus YJ016 chromosome II    
Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis    
Wolbachia endosymbiont of Culex quinquefasciatus Pel    
Wolbachia endosymbiont of Drosophila melanogaster    
Wolbachia endosymbiont strain TRS of Brugia malayi    
Wolinella succinogenes DSM 1740    
Xanthobacter autotrophicus Py2    
Xanthomonas axonopodis pv. citri str. 306 plasmid pXAC64    
Xanthomonas campestris pv. campestris    
Xanthomonas campestris pv. campestris str. 8004    
Xanthomonas campestris pv. campestris str. ATCC 33913    
Xanthomonas campestris pv. vesicatoria str. 85-10    
Xanthomonas oryzae pv. oryzae KACC10331    
Xanthomonas oryzae pv. oryzae MAFF 311018    
Xanthomonas oryzae pv. oryzae PXO99A    
Xylella fastidiosa 9a5c plasmid pXF51    
Xylella fastidiosa M12    
Xylella fastidiosa M23 plasmid pXFAS01    
Xylella fastidiosa Temecula1    
Yersinia enterocolitica subsp. enterocolitica 8081    
Yersinia pestis Angola    
Yersinia pestis Antiqua    
Yersinia pestis biovar Microtus str. 91001 plasmid pPCP1    
Yersinia pestis CO92    
Yersinia pestis KIM plasmid pMT-1    
Yersinia pestis Nepal516    
Yersinia pestis Pestoides F    
Yersinia pseudotuberculosis IP 31758    
Yersinia pseudotuberculosis IP 32953    
Yersinia pseudotuberculosis PB1/+ plasmid pYPTS01    
Yersinia pseudotuberculosis YPIII    
Zymomonas mobilis subsp. mobilis ZM4    
   
Last updated: Sep. 11, 2006