TransTermHP v2.07 (built on Jan 21 2009) 25 bins; sample size is 20000000 --pval-conf=/fs/szasmg2/carlk/TTupdate2/expterm.dat --gc=-2.3 --au=-0.9 --gu=1.3 --mm=3.5 --gap=6 --max-len=59 --min-stem=4 --max-loop=13 --min-loop=3 --uwin-length=6 --uwin-require=3 --max-hp-score=-2 --max-tail-score=-2.5 --loop-penalty=1,2,3,4,5,6,7,8,9,10,11 --start-cut=0 --end-cut=25 Genes: 0.405112 %AT, 2595626 nt, 23228 terms. Intergenic: 0.460325 %AT, H2T: 376822 nt, 2264 terms; T2T: 109580 nt, 1375 terms; H2H: 141264 nt, 1582 terms. Each terminator entry starts in column 3 and is of the form: term # start - end +/- regionconf hp tail | notes Followed by the sequence of the 5' tail, 5' stem, loop, 3' stem, and 3' tail. Genes are interspersed, and start the first column. SEQUENCE gi|218665024|ref|NC_011761.1| Acidithiobacillus ferrooxidans ATCC 23270, complete genome (length 2982397) dnaN 86 - 1183 + | DNA polymerase III, beta subunit TERM 1 2144 - 2194 + G 75 -2 -4.96848 | gap 5, overlap 2146 GGGTGTGCAGATCTT TG-CTGCGGTCACCACCG-C-CCGG CAGATT CCGGCGACGGTGG-G-CGGCAGTCA TTTTTGTCTGGCAGC AFE_0002 1185 - 2237 + | DNA replication and repair protein RecF TERM 2 3261 - 3251 - g 88 -6.8 -4.91873 | CAGACCAAGGAAAAA CTGG TCT CCAG CGAGGTCAAACCGAT TERM 3 4567 - 4593 + G 70 -12.2 -2.91276 | overlap 4567 4590 4591 CTTTTCCATGCTCAT GGGCGACGCGGT GGA ACCGCGTCGGCG CTTTATCGAGGAGAA TERM 4 4567 - 4594 + G 82 -12 -3.85817 | gap 1, overlap 4567 4590 4591 CTTTTCCATGCTCAT GGGC-GACGCGGT GGA ACCGCGTCGGCGC TTTATCGAGGAGAAT gyrB 2237 - 4639 + | DNA gyrase, B subunit TERM 5 4912 - 4898 - g 70 -4.2 -4.56597 | opp_overlap 4906, overlap 4900 GTCCTGGCGGAAAAA GACCAG ACC CTGGTG GAAGACCTGCAGGTA TERM 6 5427 - 5467 + G 71 -9 -3.83205 | overlap 5428 ATCTCCCCGGTGCAC CCT-TCGTGGCGCCGGACGG CAC CC-TGCGGCGCCGCGACAGC TTTCATCTGACCGAT TERM 7 5428 - 5466 + G 70 -12.5 -2.89602 | overlap 5427 TCTCCCCGGTGCACC CT-TCGTGGCGCCGGACGG CAC CC-TGCGGCGCCGCGACAG CTTTCATCTGACCGA TERM 8 5542 - 5553 + G 83 -4.4 -5.06414 | TTTGTACTGCCATGA TCAC GAAG GTGA TTTTTGTTCCAAGGG TERM 9 6604 - 6578 - g 93 -6.4 -5.18726 | opp_overlap 6592, overlap 6579 TCCGGAGAAGAAAAA CTCCGCGCCGGA CTC TCCGCCGAGGAT GCCGGGATTCTCGAC TERM 10 6603 - 6579 - g 73 -9.9 -3.70512 | opp_overlap 6592, overlap 6578 CCGGAGAAGAAAAAC TCCGCGCCGGA CTC TCCGCCGAGGA TGCCGGGATTCTCGA AFE_0004 4784 - 8290 + | hypothetical protein AFE_0005 8385 - 8897 + | spore coat protein TERM 11 9304 - 9281 - gf 71 -8.8 -3.72576 | gap 1 TCCTGCTGGATGAAA TCCC-GCCGCC AGC GGCGCCCGGGA TGGTCCGGATCGCAC AFE_0006 8911 - 9654 + | pilus chaperone protein, putative TERM 12 10844 - 10889 + GF 77 -8.1 -4.09685 | gap 1 AGTACATCTCAAGGG CAC-ACCGGTGCGCAGTTCTCC GTC GGGGTCCAGCGCATCGGCCGTG TTTTCAGCGCTGGCG TERM 13 11760 - 11777 + GF 75 -11.3 -3.42574 | CTCGCGACGTGCGCC CACCGGA CCGG TCCGGTG TTGTCGTGAAGTTCC AFE_0007 9620 - 12064 + | outer membrane usher protein, putative AFE_0008 12061 - 12525 + | spore coat protein AFE_0010 13118 - 12684 - | hypothetical protein TERM 14 12714 - 12735 + g 93 -7.2 -5.28176 | CTTTTCCGTTGATGG CGGACGTC CGCCAA GCCGTCCG TTTTTTCTGGCTGCC minE 13702 - 13451 - | cell division topological specificity factor MinE minD 14513 - 13704 - | septum site-determining protein MinD TERM 15 13962 - 14010 + g 89 -18.3 -3.01712 | gap 1, opp_overlap 13972, overlap 13972 ATCCTCGACGCGCTT GGGGGAGTAACGGGTGA-GGAG GAGATG CTCCTTCACCGGTTCCTCCCCC TGTTCCGCCCGCCGC minC 15215 - 14532 - | septum site-determining protein MinC AFE_0014 15620 - 15294 - | ferredoxin TERM 16 15350 - 15362 + g 81 -4.7 -5.00884 | overlap 15351 TCCAGGTTTCCGCAT CCGGC AAA GCCGC TTTTTTACGGAGGAT topA 18172 - 15617 - | DNA topoisomerase I TERM 17 15687 - 15709 + g 85 -4 -5.40072 | TCGCCGGCTGACGGG CCCCTGGCTT TGG AAGCGGCGGG TTTTTTTGCCGCGGC TERM 18 15763 - 15784 + g 89 -6.5 -5.08011 | gap 1, overlap 15757 15759 15763 15778 15779 TTTTTTGGGCGGCAA CC-GCCGTGG CTT CCGTGGCCGG TTTTTTGGCCGTTTT TERM 19 15947 - 15978 + g 95 -10.9 -4.43844 | gap 1, opp_overlap 15955, overlap 15950 ACATTCGCTCTGCGG GCAGGCAAGCTGCT CTCCC AGCCGCTTGCC-GC TTTTCTCGATCATGA TERM 20 16090 - 16102 + g 76 -5.5 -4.58283 | overlap 16088 AATAAAAAACCTTGC CGTAG CGG CTGCG TTTTTCGACCAGTTC TERM 21 17392 - 17406 + g 79 -9.2 -4.14511 | TGAAGGGCGCGGCCG GCTGGC GTT GCCGGC TTTTGCGCTCCACTT TERM 22 17501 - 17516 + g 83 -2.6 -5.18726 | gap 1, overlap 17501 17502 GTCACCGTCGGCGAT G-TCGAA CTG TTCGAGC TTTTTATTCTGCCAG AFE_0016 18616 - 18176 - | smg family protein AFE_0017 19723 - 18626 - | DNA processing protein DprA, putative AFE_0018 20769 - 19720 - | LysM domain protein TERM 23 19890 - 19903 + g 91 -8.1 -4.84363 | GCAGGGCGAAGGTTT TGCCG GTCA CGGCA TTTTTCGTCGTTTCC TERM 24 21187 - 21169 - g 71 -8.1 -4.07568 | GCGCCGCGCCGAAAA GGTGACG GTACG CGCCACC ACGGTACAGGGCAAA TERM 25 21240 - 21275 + G 72 -2.5 -4.83615 | gap 1, opp_overlap 21255 GTCTGCTGGCGGTTT GCCTGCAGCACGAGAT CGACC ATCTCGA-CGGCACGC TTTTTATCGACCATC def-2 20852 - 21355 + | polypeptide deformylase TERM 26 21523 - 21534 + G 74 -5.8 -4.56775 | overlap 21513 21518 21529 AGGAGGCTCTGGCCG CAGG CATT CCTG TTTTTCAGCCGGAAT TERM 27 21596 - 21559 - g 80 -10.5 -4.11484 | gap 1, opp_overlap 21580 CGGAATCCTGTAAAA CGG-GCGAGGCCCTGGAA TTG CTCCGGAGCCTGGCGCCG GATCTGCTGATCGTC fmt 21348 - 22289 + | methionyl-tRNA formyltransferase TERM 28 22345 - 22323 - g 70 -3.4 -4.62471 | gap 1 TTGAACGGGCAAAAA GCACATCGG GTGGGG CCG-TGCGC AAGGCCGCCATTACC TERM 29 22659 - 22646 - g 77 -3.7 -5.0133 | GAGGCCGTCAAAAAA CCGTG GGCG CGCGG CCTGATGAATGCCGT sun 22286 - 23590 + | sun protein TERM 30 23645 - 23665 + G 84 -6.1 -5.00616 | GGCTGTTGGTCGTCA TACTGCTCG GGC TGGGCGGTA TTTTTTGCGCAACCG AFE_0022 23581 - 24180 + | hypothetical protein TERM 31 24266 - 24278 + G 70 -3.3 -4.59773 | overlap 24267 CGTTCTGCTCCTGCT CGCCA TTG TGGCC TTTTTGGGGATCAAC TERM 32 26186 - 26208 + G 70 -3.2 -4.58395 | TGACGGGCCCGGCTT CCCGGTCGAG TTG CTGGCGCGGG TTTTTGAGCCCTACG ntrY 24231 - 26363 + | nitrogen regulation protein NtrY, putative ntrX 26385 - 27791 + | nitrogen assimilation regulatory protein NtrX, putative AFE_0025 27788 - 27985 + | hypothetical protein TERM 33 28519 - 28507 - g 74 -5.5 -4.4891 | TTTATTATCAGAAAA CAGCA ACA CGCTG ATTAAACTGGTTGAA TERM 34 29366 - 29389 + G 73 -8.8 -3.90922 | AATTGCCCTCCGTCT CTGCAGGTCG TCGC CGATCCGCAG TTGTTTGAACAGGCT TERM 35 29504 - 29488 - g 70 -3.6 -4.63218 | TCGGCGCGAAGAAAA CGGGCA GTTTG TGGCCG GGGTCGTGGACAATG AFE_0026 28118 - 29713 + | sensor histidine kinase TERM 36 29786 - 29771 - g 71 -5.4 -4.4009 | overlap 29773 TGCGATCCCAGAAAA TCCTCA TCGT CGAGGA CGAAAAAAATCTGCG TERM 37 29902 - 29858 - g 87 -10.5 -4.40003 | opp_overlap 29855, overlap 29860 CTGCACAAACAGAAA GTGCGGAGGACGCCCTGGCCA TCA TGGCCAGGGAACTCCCCGTCC TGGTCCTTACAGACC AFE_0027 29755 - 31122 + | sigma-54 dependent transcriptional regulator/response regulator TERM 38 32418 - 32439 + G 74 -7.3 -4.39998 | overlap 32420 CACAATATCTATTTT GCTATGGCT ATCA AGCCATATC TTTATTGTCTGAATG tetH 31545 - 33044 + | tetrathionate hydrolase AFE_0028 33254 - 33018 - | hypothetical protein TERM 39 34492 - 34504 + G 71 -6.9 -4.27467 | overlap 34493 CGCTGACAACGAGTT TGCGG TTA CCGCG TTTATTGCATTCTGA AFE_0030 33338 - 34519 + | hypothetical protein trmE 35946 - 34591 - | tRNA modification GTPase TrmE TERM 40 34630 - 34620 - G 85 -5.4 -5.08011 | overlap 34609 34610 AAAAGCGCGAAAAAA TCTC GCC GAGA ATGTCTTCCACGTCC TERM 41 35911 - 35880 - G 84 -10.2 -4.21936 | gap 1, opp_overlap 35881 35904 35910 CGGAGAAGCGCAAAA TGCCGACACCGCC TTCTCCC GGCGGCGT-GGCA ATCGCCACGATAGTG AFE_0032 37570 - 35984 - | inner membrane protein, 60 kDa AFE_0033 37801 - 37586 - | conserved hypothetical protein TIGR00278 rnpA 38148 - 37798 - | ribonuclease P protein component rpmH 38287 - 38153 - | ribosomal protein L34 AFE_0036 40025 - 38358 - | ABC transporter, ATP-binding protein TERM 42 39252 - 39266 + g 91 -5.6 -5.40464 | overlap 39254 CACCTCGGTTCTGGC CTCCTG CTC CAGGCG TTTTTCTTTCTGCTC AFE_0037 41025 - 40123 - | transcriptional regulator, LysR family AFE_0038 42199 - 41087 - | drug resistance secretion protein, putative AFE_0039 43628 - 42174 - | RND efflux system, drug efflux transporter, outer membrane lipoprotein TERM 43 42677 - 42664 - GR 75 -3.7 -4.84761 | opp_overlap 42664, overlap 42665 42666 ATATCCGGATAAAAA GCGGC GCGG GCGGC TTTGGTCTGCTGGAC AFE_0040 45231 - 43609 - | drug resistance transporter, EmrB/QacA family TERM 44 46599 - 46614 + G 70 -3.2 -4.66833 | overlap 46601 TTTCGGGTTGTGGTG GATGGC GATT GCCATA TTTTTCACCTTGCGC AFE_0041 45787 - 46944 + | C4-dicarboxylate transporter/malic acid transport protein TERM 45 47190 - 47176 - g 79 -12.8 -3.53343 | opp_overlap 47175 47174 AACCGGCTGGCCAAA GCGCCG CGG CGGCGC GATTTCAAAACCGTT AFE_0042 46984 - 47796 + | Tat (twin-arginine translocation) pathway signal sequence domain protein TERM 46 48523 - 48509 - g 77 -8.6 -4.36914 | CTGCGCTGGAGAAAA TGGTGT ACG ACACCA AAGTCAAGAACGGGG AFE_0043 47821 - 48831 + | periplasmic solute-binding protein, putative TERM 47 48862 - 48832 - f 100 -13.5 -3.93256 | gap 1, opp_overlap 48839, overlap 48833 48839 TACACGGGCAAATAA GTAAAAAGGGAGGG AATT CCCTCCCTTTTT-C AGTCAGAACAGGAGA TERM 48 48862 - 48833 - f 81 -13.7 -2.95472 | opp_overlap 48839, overlap 48832 48839 ACACGGGCAAATAAG TAAAAAGGGAGGG AATT CCCTCCCTTTTTC AGTCAGAACAGGAGA TERM 49 48856 - 48839 - f 100 -12.7 -5.04356 | opp_overlap 48839, overlap 48832 48833 GCAAATAAGTAAAAA GGGAGGG AATT CCCTCCC TTTTTCAGTCAGAAC TERM 50 48839 - 48856 + F 100 -12.7 -4.65895 | opp_overlap 48839 48832 48833 GCAAATAAGTAAAAA GGGAGGG AATT CCCTCCC TTTTTCAGTCAGAAC TERM 51 48997 - 49011 + G 76 -7 -4.52589 | overlap 48991 ATGGATCTACTGGGG CGGCGG GAC CCGGCG TTTTATCTACGGCCC doxD_2 48896 - 49966 + | DoxD-like family protein TERM 52 50008 - 50035 + F 74 -7.7 -4.09739 | GCCAGCCTCAAATTG TGGCATGGGCG TCGGTT CATCCATGCCA TTTTCCGGAAATTCA AFE_0045 50064 - 50711 + | sulfur/pyrite/thiosulfate/sulfide-induced protein AFE_0046 50772 - 51173 + | hypothetical protein AFE_0047 51701 - 51204 - | hypothetical protein TERM 53 51690 - 51712 + g 76 -6.2 -4.63527 | opp_overlap 51666 51667, overlap 51666 51692 CATCGCGATGATGGC CACTTTGGCC ATA GGCCAAACCG TTTTTGACATGATGG doxD_1 52877 - 51795 - | DoxD-like family protein AFE_0049 53943 - 52930 - | periplasmic solute-binding protein, putative AFE_0050 54777 - 53965 - | Tat (twin-arginine translocation) pathway signal sequence domain protein TERM 54 54246 - 54261 + gH 90 -11.8 -4.02571 | opp_overlap 54232, overlap 54260 AGTTGGCGGGGTCGG CCGCCG CCGC CGGCGG TTCTTTGATCCATTC TERM 55 54572 - 54584 + gH 86 -10.5 -4.08064 | overlap 54568 ACCGTTTTGAAGTCG CGCCG CCG CGGCG TTTTGGCCAGGCGTT AFE_0051 54776 - 55309 + | hypothetical protein AFE_0052 55991 - 55329 - | hypothetical protein TERM 56 56047 - 56072 + r 74 -9.8 -3.72576 | gap 1, opp_overlap 56070, overlap 56040 56063 TCACCCCCCGTCCGC CGGCGTTTCCG TTCTT CGGAAAC-CCG TTTCCTACCGCGCAG AFE_0053 57149 - 56115 - | hypothetical protein AFE_0054 57960 - 57310 - | integral membrane protein, MarC family AFE_0055 58078 - 58335 + | hypothetical protein TERM 57 58368 - 58389 + F 100 -12.9 -4.91084 | GGCTAGATTGTGCGC GGGCCTCCC GGTC GGGTGGCCC TTTTCTTGTTGACTC TERM 58 59555 - 59600 + G 70 -4.5 -4.56775 | gap 1, opp_overlap 59563, overlap 59559 GCCGGAAATGGTCCT GAGCGAAATCCTCCGGCGCAGC GGC GCAGCGGCGGGCGACATC-CTC TTTTTCGGCGCGGAT TERM 59 59955 - 59918 - g 77 -8.4 -4.34402 | GGCGGTACAGGAAAA GGTCTTC-GCCGCCCTCG GTAT CG-GGGCGGAAGAAGCCC GGGACAAATTCGGCT aspS 58419 - 60209 + | aspartyl-tRNA synthetase TERM 60 60786 - 60816 + G 100 -16.8 -4.58395 | overlap 60788 CCGCAAGGTGCTCGA CTGGGCCTTCGGGC AAC GCCCCAAGGCCCTG TTTTTCCCGGATCAG TERM 61 60788 - 60814 + G 100 -18 -3.90762 | overlap 60786 GCAAGGTGCTCGACT GGGCCTTCGGGC AAC GCCCCAAGGCCC TGTTTTTCCCGGATC nadA 60310 - 61392 + | quinolinate synthetase complex, subunit A AFE_0058 61401 - 62012 + | acyltransferase family protein AFE_0059 62092 - 62844 + | hypothetical protein TERM 62 63271 - 63254 - g 100 -8.3 -5.21709 | overlap 63255 CTGCAGATCAAAAAA GCCGCCG TCGG CGGTGGC CACGCAGCCAAGGAA TERM 63 63267 - 63255 - g 76 -10.5 -3.72302 | overlap 63254 TGCAGATCAAAAAAG CCGCC GTC GGCGG TGGCCACGCAGCCAA ruvC 62927 - 63427 + | crossover junction endodeoxyribonuclease RuvC TERM 64 63824 - 63814 - g 71 -8.2 -4.08692 | GAATCGGCCCGAAAA CCGC CGA GCGG CTGGTGGTGGAACTG ruvA 63456 - 64037 + | Holliday junction DNA helicase RuvA ruvB 64080 - 65102 + | Holliday junction DNA helicase RuvB ybgC 65092 - 65514 + | tol-pal system-associated acyl-CoA thioesterase tolQ 65521 - 66222 + | TolQ protein tolR 66219 - 66629 + | TolR protein TERM 65 67044 - 67025 - g 79 -7.8 -4.56597 | CGGGCGGCCGAAAAA GCCGCC GCGGAAAA GGCGGC TGCACAAAAAGCTGC TERM 66 67067 - 67055 - g 74 -3.3 -4.82901 | overlap 67056 GCGGCTGCACAAAAA GCTGC TGC GCAGA AAGCCGCCGCCGAAA TERM 67 67124 - 67100 - g 70 -4.3 -4.56597 | overlap 67085 67084 67103 67115 67116 GCCGCCGCCGAAAAA CAGGCGG-CGC AAAAA GCGGCCGC-TG CACAGCGCGCGGCGG TERM 68 67137 - 67115 - g 74 -5.5 -4.57073 | gap 1, overlap 67103 67100 67116 CAGGCGGCGCAAAAA GCGGC-CGCT GCAC AGCGCGCGGC GGAGCTGAAGCGGCA tolA 66626 - 67579 + | TolA protein TERM 69 67587 - 67599 + G 77 -3.3 -4.91511 | ATGGCTAAACGCTTT TGGAC CCT GGCCA TTTTTCTGCTGGCAT tolB 67572 - 68840 + | tol-pal system beta propeller repeat protein TolB AFE_0068 69571 - 68882 - | exsB protein TERM 70 69514 - 69485 - G 77 -11.3 -3.59979 | overlap 69470 69469 69486 GGCGTGGACCGCAAA GCCGTCCCGGCGC ATGA GCGCCAGCACGGT GGCGGAATCCAGTCC TERM 71 69513 - 69486 - G 77 -14.8 -2.75844 | overlap 69470 69469 69485 GCGTGGACCGCAAAG CCGTCCCGGCGC ATGA GCGCCAGCACGG TGGCGGAATCCAGTC AFE_0069 70218 - 69574 - | radical SAM domain protein AFE_0070 71036 - 70218 - | hypothetical protein AFE_0071 71635 - 71057 - | peptidoglycan-associated lipoprotein, putative AFE_0072 71970 - 72170 + | hypothetical protein AFE_0073 73722 - 72256 - | undecaprenyl-phosphate galactosephosphotransferase TERM 72 72939 - 72923 - Gf 95 -6.5 -5.40072 | overlap 72924 72927 TCGTGGCCAAAAAAA TGCATGG CCT CCATGCC AAACAGAGGCAGACC TERM 73 72938 - 72924 - Gf 76 -10 -3.83561 | overlap 72923 72927 CGTGGCCAAAAAAAT GCATGG CCT CCATGC CAAACAGAGGCAGAC TERM 74 73642 - 73627 - Gf 70 -3.2 -4.66537 | gap 1, overlap 73611 73638 GCGGCCAAGATAAAA GGCGGCC AAA AGC-GCC AGCACATCGCCCAGC TERM 75 73821 - 73800 - gH 79 -13 -2.91322 | overlap 73797 AGACTTGGGAAAGTA CCTGCGCG TCAAGC CGCGCAGG GCCAACCGGTACAAG AFE_0074 73707 - 74717 + | chain length determinant family protein AFE_0075 74805 - 75164 + | hypothetical protein TERM 76 76056 - 76088 + G 76 -6.2 -4.59853 | gap 1 ACGGCGGCTGGATCA CGGTCACCGGGCTGG TCGG CCC-CCTGTTGACCG TTTTTGACCGCTTCC TERM 77 76380 - 76368 - g 81 -4.7 -5.00616 | overlap 76370 CGCTGGCGGAAAAAA CCGCC CCG GTCGG ACAAATACTACTCGT AFE_0076 75356 - 76855 + | polysaccharide biosynthesis protein TERM 78 76854 - 76844 - f 76 -5.4 -4.72272 | GTCTCGCAGGAAAAA CATG GAT CATG AACAGATAGAAAGTC TERM 79 77265 - 77237 - g 71 -6.8 -4.19735 | gap 1 GGGCCGAAAACGAAA GCAGATAGACGAA AGCG TTCGCC-ACCTGC CCGCCACTGGAAAAC AFE_0077 76845 - 77906 + | hypothetical protein TERM 80 78161 - 78145 - g 75 -2.1 -4.93547 | opp_overlap 78145 78148 78148, overlap 78148 TCAATCAAGTAAAAA CATGGGC TCT GCCGCTG GTTTTTCCACTGGGA TERM 81 78754 - 78765 + G 89 -7.2 -5.12617 | AGCCTATTATGGTAT GCGC AATG GCGC TTTTTTCGATACTTA AFE_0078 77969 - 78952 + | glycosyl transferase, group 2 family protein AFE_0079 78949 - 80160 + | glycosyltransferase, putative TERM 82 80946 - 80968 + G 70 -4 -4.69053 | overlap 80949 TGGCCATAAATTGTT GTGGCGCCAA ATC TGGGTGCTGC TTTTGTTGGCTAATC AFE_0080 80176 - 81456 + | hypothetical protein TERM 83 82187 - 82216 + G 76 -10.7 -3.70902 | overlap 82189 AACTTCTCCCCTCTT TATACGCGGGGGC GATC GCCTTCGCGTATC TTTCCGTCTACGAAG TERM 84 82189 - 82214 + G 86 -13.3 -3.43773 | overlap 82187 CTTCTCCCCTCTTTA TACGCGGGGGC GATC GCCTTCGCGTA TCTTTCCGTCTACGA mtfA 81463 - 82503 + | mannosyltransferase AFE_0082 82571 - 83497 + | O antigen biosynthesis rhamnosyltransferase, putative TERM 85 83654 - 83669 + F 70 -6.8 -4.17048 | overlap 83630 83656 CGCAGCGTCATCCCC TGCGCC CACC GGCGTA TTCTTTTACGAACAA TERM 86 84136 - 84148 + F 85 -4.7 -5.19212 | GGTCCCCATACAGTC CCCAC TTG GCGGG TTTTTTCGTGCTGGT AFE_0085 84598 - 84819 + | prevent-host-death family protein AFE_0086 84819 - 85232 + | hypothetical protein AFE_0087 85229 - 85519 + | hypothetical protein TERM 87 85559 - 85537 - f 100 -14.9 -4.55128 | opp_overlap 85553 ACCCGGAAACGAAAA GGCCAACGC ACATG GCGTTGGCC CAACTCCTTCAGCCT AFE_0088 85685 - 85960 + | plasmid maintenance system killer protein AFE_0089 85976 - 86293 + | DNA-binding protein, putative AFE_0090 86308 - 86487 + | hypothetical protein AFE_0091 86884 - 86624 - | hypothetical protein AFE_0092 86994 - 88070 + | fic family protein AFE_0094 88938 - 88630 - | prevent-host-death family protein AFE_0095 89129 - 88956 - | hypothetical protein AFE_0096 89668 - 89240 - | hypothetical protein TERM 88 89582 - 89550 - G 89 -15.6 -3.28712 | overlap 89527 TGCGTGCCGGGAGAA CGGC-GCGCCAGCAGC AGC GCCGC-GGCGCCGCCG CCGACGATGGCCACC AFE_0097 90102 - 89671 - | hypothetical protein TERM 89 89964 - 89975 + g 74 -5.8 -4.56775 | overlap 89944 AAGGCGTGGTACCGC TGCC TTGG GGCA TTTTTCCAACGGGGT AFE_0098 92506 - 90248 - | DoxD family protein/pyridine nucleotide-disulfide oxidoreductase TERM 90 90592 - 90613 + g 95 -13 -4.27316 | CGCCCTGCTTCGCCG CCGGTGCC AGGCCG GGCACCGG TTTTCCCTTCCAGGC TERM 91 91088 - 91112 + g 72 -12.2 -3.01712 | CAGGCCCAGACGCTC GGCGGGATCT TCGGC AGATTCCGCC TGTTCGAAGGCGGAG AFE_0099 92626 - 93072 + | hypothetical protein AFE_0100 94164 - 93079 - | hypothetical protein AFE_0101 94846 - 94154 - | ABC transporter, ATP-binding protein TERM 92 94631 - 94607 - G 85 -12.1 -3.83026 | GGTCTGCAGACGAAA GCCGGCCAGTG CGT CACTGCCCAGC TTCCAGATATCCGTA AFE_0102 95984 - 94848 - | ABC transporter, permease protein, putative TERM 93 95081 - 95139 + g 86 -14.6 -3.28712 | opp_overlap 95076 95075 95132 ACTGAAAGACGATCA TCTGGATCAGTTCGCCGCTTTTGGCGCC AAT GGCCTTGAGAGCGCCGAAATGCTCCAGA TTGTCCAGAACGAAC TERM 94 95216 - 95197 - G 76 -6.5 -4.4648 | AGTCCTACGAGAAAA CTGATCA GAGTCA TGATCAG GATGCTGGTGCCCAT AFE_0103 96208 - 95981 - | hypothetical protein TERM 95 96234 - 96247 + H 71 -9.5 -3.59979 | CTGTGGATTTGAAGC CGCCC CCGT GGGCG TTTACACTGCAGAGC AFE_0104 96317 - 96553 + | hypothetical protein AFE_0105 97855 - 96590 - | metal ion transporter, NRAMP family TERM 96 97966 - 97948 - R 70 -6.6 -4.16146 | opp_overlap 97939, overlap 97939 AAAATACCCCTAAAA GGAGCTTG TGG CCAGCCCC GGCGCGACCGTTCCA AFE_0106 99282 - 97942 - | sensor histidine kinase AFE_0107 99956 - 99246 - | DNA-binding response regulator AFE_0108 100177 - 101736 + | RND efflux system, outer membrane lipoprotein, NodT family AFE_0109 101733 - 102815 + | efflux transporter, RND family, MFP subunit TERM 97 103060 - 103040 - f 71 -4.6 -4.62069 | gap 1, overlap 103042 GCGCCACTGGAAAAA GCCGTCGGG CAAG CCCC-CGGC ATCAACTATATGACG TERM 98 104432 - 104458 + F 73 -5 -4.60648 | overlap 104433 GGCCGGCGACGGTGA CGCTGGCGCTGA TCC TCACCGTCGGCA TTTATTTCCTCTTTT TERM 99 105833 - 105861 + F 71 -4.4 -4.64591 | overlap 105813 105812 GTCTGGGCTTCGGGT CGCTGGTTTCGC TCTTT GTGATCCCGGCG TTTTATGTGTGGTTC AFE_0111 105998 - 106156 + | hypothetical protein AFE_0112 106392 - 106949 + | conserved hypothetical protein TIGR00650 AFE_0113 107062 - 107265 + | hypothetical protein AFE_0114 107262 - 108281 + | lipase/esterase, putative AFE_0115 108301 - 109737 + | hypothetical protein TERM 100 109855 - 109875 + T 71 -9.7 -3.57561 | opp_overlap 109850 GTCAGCGAAAGCGGC GGCGGAC CCGTTCA GTCCGCC TTTGCCGCCTTCCCG AFE_0116 110220 - 110119 - | hypothetical protein TERM 101 110637 - 110623 - g 89 -4.2 -5.24129 | opp_overlap 110623 GGTGTTCAGAAAAAA TATCGC AAG GCGGTA TTCTGGTCGCGCAAG AFE_0117 110500 - 111384 + | hypothetical protein AFE_0118 111686 - 111474 - | hypothetical protein TERM 102 111597 - 111576 - G 71 -8.7 -3.77206 | CACAACGCCATGAAA CGTACGCAC ATGT ATGCGCACG ATGCCCACCACCAGC AFE_0119 111694 - 112356 + | transcriptional regulator, Crp/Fnr family AFE_0120 112446 - 112652 + | hypothetical protein AFE_0121 112865 - 112734 - | hypothetical protein AFE_0122 112952 - 113305 + | hypothetical protein gcp 113298 - 114305 + | O-sialoglycoprotein endopeptidase TERM 103 114718 - 114762 + G 89 -12.6 -4.07568 | opp_overlap 114707 114708, overlap 114728 TAAAGGCAGCATGCG CCGTGCCCTGGCCGCAGCGC AGGAG GCGCAGCGGCTGGTTCCCGG TTTTCGCCCGGCGGC TERM 104 114728 - 114752 + G 73 -14.2 -2.75229 | opp_overlap 114708, overlap 114718 ATGCGCCGTGCCCTG GCCGCAGCGC AGGAG GCGCAGCGGC TGGTTCCCGGTTTTC AFE_0124 114305 - 114832 + | TPR domain protein AFE_0125 115435 - 114839 - | hypothetical protein TERM 105 115178 - 115163 - G 78 -10.4 -3.87373 | GAGATGGCCGAGAAA GGTGGC GAGG GCCACC GCGGCCAGCGCCCAG TERM 106 115246 - 115274 + g 70 -5.1 -4.57073 | opp_overlap 115268 CGATGCCCTTGGTCA GGTCGCCGAGC AAAGTCA GCAAGGCGGCC TTTTTGCCACCGATG TERM 107 115477 - 115491 + H 100 -9.2 -5.03314 | opp_overlap 115468 ATTATAGGCCGAGCT GCGGCG GAT TGCCGC TTTTTTCGGGATAAC folB 115508 - 115867 + | dihydroneopterin aldolase AFE_0127 117225 - 115885 - | MiaB-like tRNA modifying enzyme YliG, putative AFE_0128 117614 - 117222 - | NifU domain protein AFE_0129 118351 - 117611 - | oxidoreductase, short-chain dehydrogenase/reductase family TERM 108 117942 - 117954 + gH 73 -4.7 -4.58395 | overlap 117923 117943 TCGCCGATGTTGACG ACGGC GCC GCCGG TTTTTCGCAAATGCG TERM 109 119287 - 119322 + Gr 89 -9.8 -4.46212 | gap 2 CGCTGCGGTGGAGGC CGGGCTGGAGGTGGCC TTTTAT GGCCATCTC--GCCCG TTTTCTGGTGGAACA AFE_0130 118133 - 119488 + | hypothetical protein AFE_0131 120526 - 119591 - | hypothetical protein TERM 110 120667 - 120685 + Gr 72 -11.6 -3.03124 | opp_overlap 120662 CAGCGTAAATCCCAG CGCCGGCG TAC CGCCGGCA TGTTCCGGAATGCGG AFE_0132 120870 - 120643 - | hypothetical protein AFE_0133 120599 - 120724 + | hypothetical protein TERM 111 120773 - 120757 - GT 70 -6.5 -4.10007 | opp_overlap 120771 AGAACTCCCGTAAAA TGCGGCA AAT TGTCGCA CCCCGATATCAGGGG hemN 122394 - 121003 - | oxygen-independent coproporphyrinogen III oxidase AFE_0135 123364 - 122432 - | transcriptional regulator, LysR family TERM 112 122761 - 122746 - G 73 -4.7 -4.60924 | GAAACTCGCGAAAAA GATCG AGGCGG CGATC CTCTACCGGGTAGGT AFE_0136 123512 - 123387 - | hypothetical protein TERM 113 124541 - 124559 + G 73 -4.5 -4.58395 | overlap 124543 AGCCTATAACGCACT TGCGCCA CAGAC TGGCGGA TTTTTGAACGGTGGA AFE_0137 123600 - 124943 + | hypothetical protein TERM 114 124974 - 124995 + T 100 -9.4 -5.50925 | GTTCCTCCTCTCCTC GCCTCGAC CCGCAA GTCGGGGC TTTTTTGTATTCGTT AFE_0138 126126 - 125017 - | LPS heptosyltransferase II TERM 115 125692 - 125678 - G 85 -12.8 -3.78775 | opp_overlap 125678 TCGTTCAGGAGCAAA CGGCGC CCC GCGCCG CTGAAACCGGTGCGG TERM 116 126073 - 126127 + g 82 -11.5 -3.85704 | gap 1 AAAGGCTTCATGTTC GTTACAGGGCGGTTCTGCTGTAC-CG GCAT CGTGTGCATCGGGATCGTCCTGCAAC TTTGGTCGTTGCTCG AFE_0139 126913 - 126149 - | hypothetical protein AFE_0140 128302 - 126917 - | oxidase, FAD-binding TERM 117 127939 - 127925 - G 71 -5.6 -4.37092 | ATCGGGGGGATAAAA CAGTCC GTC GGCCTG CACATAGGCACTGAT AFE_0141 129375 - 128299 - | phosphoheptose isomerase/cytidylyltransferase AFE_0142 129737 - 129372 - | conserved hypothetical protein TIGR00252 AFE_0143 131579 - 129741 - | lipoprotein, putative AFE_0144 131649 - 132524 + | tetrapyrrole methylase family protein AFE_0146 132816 - 132965 + | hypothetical protein AFE_0147 133299 - 133054 - | hypothetical protein AFE_0148 134074 - 133571 - | hypothetical protein AFE_0149 133298 - 133624 + | hypothetical protein AFE_0150 134904 - 134110 - | hypothetical protein AFE_0151 135417 - 135019 - | rhodanese-like domain protein AFE_0152 135831 - 135448 - | hypothetical protein TERM 118 136176 - 136192 + G 84 -11.5 -4.13767 | overlap 136182 CTCGCCGGTGTTGCG GCGCTGG TCG CCGGCGC TTTTGCCATGGCGGC TERM 119 136473 - 136432 - g 71 -5.5 -4.30576 | opp_overlap 136431 136457, overlap 136433 136434 TGGGCATGACGAAAA TGGCGGCGGCGCGGCCCGC CGAA GCGGCACTGGCTTCCGCCA CTGCCTTTGCATGTG TERM 120 136457 - 136478 + G 76 -10.1 -3.70902 | opp_overlap 136432, overlap 136431 GCGGCCCGCCGAAGC GGCACTGGC TTCC GCCACTGCC TTTGCATGTGGAGCC TERM 121 136596 - 136643 + G 95 -19.8 -3.37474 | gap 1, overlap 136598 CTTGGTGCGGTCGCA GCCCGGGCGGGTGGCGCCC-CCA TGG TGAAGGGCGCCACCCGCGTGGTC TTCTGGGGTGTTCTC TERM 122 136598 - 136641 + G 100 -21 -3.25079 | gap 1, overlap 136596 TGGTGCGGTCGCAGC CCGGGCGGGTGGCGCCC-CCA TGG TGAAGGGCGCCACCCGCGTGG TCTTCTGGGGTGTTC AFE_0153 136020 - 136712 + | integral membrane protein AFE_0154 136964 - 137620 + | MIP family channel protein TERM 123 137650 - 137685 + F 100 -19 -4.56597 | overlap 137652 CAGGTAGCACCGTAG TAGCGGCGGCGCCATG ATTT TGTGGCGCCGCCGCCA TTTTTCCCAGGGCCA TERM 124 137652 - 137683 + F 100 -21.6 -2.60032 | overlap 137650 GGTAGCACCGTAGTA GCGGCGGCGCCATG ATTT TGTGGCGCCGCCGC CATTTTTCCCAGGGC AFE_0155 137788 - 138393 + | phosphoglycerate mutase family protein speE 139374 - 138424 - | spermidine synthase TERM 125 138915 - 138902 - G 77 -3.1 -5.00884 | gap 1, overlap 138904 AGTTCCGGGAAAAAA CGC-TC GGC GACGCG GGTAACCCGCTCATC TERM 126 139356 - 139330 - G 100 -15.2 -5.08255 | ACGGGCAAAAGAAAA GGGTGGACCG CTGATTC CGGTCCACCC GTTACCGCTGTGAGT AFE_0157 139777 - 139376 - | s-adenosylmethionine decarboxylase proenzyme TERM 127 139981 - 140000 + H 79 -7.8 -4.44974 | overlap 139983 GATGCAAGGGTTTTC TGCGCACG GCGA CGTGCGGA TTTTCTAGGGTTTCC AFE_0158 140091 - 140921 + | toluene ABC transporter, ATP-binding protein, putative AFE_0159 140924 - 141706 + | toluene tolerance protein Ttg2B, putative AFE_0160 141721 - 142179 + | mce-related protein AFE_0161 142196 - 142834 + | toluene tolerance protein, putative AFE_0162 142906 - 143148 + | hypothetical protein AFE_0163 143141 - 144061 + | ABC transporter, ATP-binding protein AFE_0164 144064 - 144327 + | S4 domain protein TERM 128 145298 - 145325 + G 81 -16.4 -2.87132 | gap 1, opp_overlap 145295 145294, overlap 145300 145304 TGCTGCGGAAATCGT TC-GCAACCGGCG CGC CGCCGGTTGCTGA TGTCTGCGGCGCGCC TERM 129 145300 - 145322 + G 88 -19.2 -2.69151 | opp_overlap 145295 145294, overlap 145298 145304 CTGCGGAAATCGTTC GCAACCGGCG CGC CGCCGGTTGC TGATGTCTGCGGCGC pdxA 144324 - 145325 + | 4-hydroxythreonine-4-phosphate dehydrogenase TERM 130 145304 - 145318 + T 83 -12.8 -3.26545 | opp_overlap 145295 145294, overlap 145300 145298 GGAAATCGTTCGCAA CCGGCG CGC CGCCGG TTGCTGATGTCTGCG AFE_0166 145906 - 145352 - | HNH endonuclease domain protein ksgA 145972 - 146775 + | dimethyladenosine transferase TERM 131 146984 - 146970 - g 73 -4.2 -4.71382 | ATAACGATGGAAAAA CGCC TGGCGGT GGCG GAGTTTCTGACTCGG AFE_0169 146772 - 147239 + | hypothetical protein AFE_0168 148095 - 147205 - | hypothetical protein TERM 132 147351 - 147385 + gT 71 -6.2 -4.24204 | AGGTGTTGGTGCGGA GCCGGTAGAGGGTGCT GTT ATCGCCCGCTTCCGCC TTTTCCATCTGGGTG argS 149785 - 148046 - | arginyl-tRNA synthetase AFE_0171 151529 - 149925 - | drug resistance transporter,putative, EmrB/QacA subfamily AFE_0172 151578 - 152471 + | transcriptional regulator, LysR family prmB 153398 - 152487 - | ribosomal protein L3 N-methyltransferase xth-2 154160 - 153399 - | exodeoxyribonuclease III AFE_0175 154481 - 154173 - | hypothetical protein AFE_0176 155335 - 154478 - | hypothetical protein TERM 133 155508 - 155495 - g 85 -2.4 -5.40072 | GCTGCTGGAAAAAAA CATC CCCTGT GATG TGGAGTGGGTGGATC AFE_0177 155427 - 156029 + | glutathione S-transferase family protein xth-1 156035 - 156808 + | exodeoxyribonuclease III hemH 156805 - 157818 + | ferrochelatase AFE_0180 157886 - 158374 + | peptidyl-prolyl cis-trans isomerase, FKBP-type TERM 134 158828 - 158847 + G 73 -10 -3.67296 | gap 1 GCAGCAGGGGGGGAG GGC-GCACC GCT GGTGCCGCC TTTCCATCAATACTG TERM 135 159191 - 159201 + G 74 -6.8 -4.37092 | TCTTCCTGGCGGGGT TCCG CGG CGGA TTTTCTGGCGACACT TERM 136 159332 - 159310 - g 71 -7.6 -4.07568 | overlap 159311 159313 CGGTGGGGCCGAAAA CCAGGCCCTG ATG CAGGCCCTGC AGGACGCCATGAAGG AFE_0181 158423 - 159604 + | hypothetical protein aroE 159585 - 160481 + | shikimate 5-dehydrogenase AFE_0183 160451 - 162160 + | type IV pilus assembly protein TERM 137 162638 - 162652 + G 89 -4.2 -5.16132 | overlap 162644 CACGGCAAGTCTCCT GCGC GGCAAAA GCGC TTTTGTTTTCGTGTG TERM 138 162710 - 162741 + G 73 -4.2 -4.65153 | overlap 162712 GTCGCTATTCGGCGG GATGACCGCCGTGC ATCC GCCCCTCGGTCAGC TTTTCATTTATCTCC AFE_0184 162300 - 163892 + | sensor protein PilS, putative AFE_0185 163903 - 165240 + | type IV fimbriae expression regulatory protein PilR, putative TERM 139 165288 - 165301 + G 83 -4.5 -5.03715 | overlap 165286 ACCACGCTGCTCGGC CTGCT CGTG GGCAG TTTTTTGAACGTGGT TERM 140 165880 - 165907 + G 70 -4.7 -4.4767 | overlap 165872 165871 CCCTGTTTATCGCCG CCCTGGGCGGC GGACTG GTTGCTCTGGG TTTTCTGCTGGGTGG pilD 165237 - 166037 + | type IV pilus prepilin peptidase PilD TERM 141 166238 - 166257 + G 76 -6.4 -4.56597 | gap 1, overlap 166236 GGGTGGGCTGGATCG TGC-GGCGT TGC GCGCCCGCA TTTTTGCGGACCCGG coaE 166038 - 166652 + | dephospho-CoA kinase AFE_0188 166771 - 167523 + | hypothetical protein TERM 142 167870 - 167887 + G 78 -4.8 -4.77157 | CCCGCAACATCCCGC GCGGCA AGTATC TGCTGC TTTTTGATCCGTTGG fbp 167554 - 168573 + | fructose-1-6-bisphosphatase sspB 168768 - 169193 + | stringent starvation protein B AFE_0192 169190 - 169855 + | transglycosylase, putative AFE_0191 170079 - 169837 - | transcriptional regulator, Fis family AFE_0193 170723 - 170091 - | MJ0042 family finger-like domain protein prmA 171604 - 170726 - | ribosomal protein L11 methyltransferase accC 172947 - 171601 - | acetyl-CoA carboxylase, biotin carboxylase TERM 143 172581 - 172598 + g 74 -6.9 -4.37886 | CGCCAGCCTTCTTCA TCGCGGC CTTG GCGGCGA TTTTGTCACCCATCC TERM 144 172608 - 172622 + g 70 -10 -3.53012 | CGGCGATTTTGTCAC CCATCC GGC GGATGG TTTCCGCGCGCGGCC TERM 145 172710 - 172699 - G 74 -7.2 -4.41616 | ATTTTCTGAAAGAAA CCCG TAGC CGGG ATGAATCGCTTCGGC accB 173419 - 172949 - | acetyl-CoA carboxylase, biotin carboxyl carrier protein aroQ 173900 - 173439 - | 3-dehydroquinate dehydratase, type II AFE_0198 174445 - 174068 - | transcriptional regulator AFE_0199 174782 - 175639 + | hypothetical protein ftsZ 176924 - 175761 - | cell division protein FtsZ ftsA 178251 - 176983 - | cell division protein FtsA TERM 146 177404 - 177383 - G 78 -13.7 -3.21395 | overlap 177381 177394 ATGTCGCCGAGAATA CGCCGCGAA ATGG TCCGCGGCG GGCGGGTGCCGACGC AFE_0202 179124 - 178282 - | cell division protein FtsQ TERM 147 178833 - 178811 - G 76 -6.9 -4.55287 | TGGATCCAGAGAAAA CCCTGACCC ACGTA GGGTCTGAG GGCGGCGTTCACCTC TERM 148 179031 - 179055 + g 77 -7.7 -4.38712 | overlap 179026 179030 GTACTTTGGGCGGAG CCGCCTCGGCT TTG GGTCTGGGCGG TTTTCTGAGGGTGGC ddlB 180043 - 179117 - | D-alanine--D-alanine ligase murB 180923 - 180036 - | UDP-N-acetylenolpyruvoylglucosamine reductase TERM 149 180564 - 180605 + g 86 -13.5 -3.53224 | ACAGCCGCCCAGGGT GCCGGGTATGCCGGCGAGG AACT CGGCGCCCGCAAGCCCGGC TTTGGCCGCGAAATG murC 182314 - 180920 - | UDP-N-acetylmuramate--alanine ligase TERM 150 182264 - 182214 - G 74 -11.1 -3.46602 | gap 1, overlap 182215 GGTCGCAGATCAGAA CCGGAGACGGCATAGCCGAGATTC AGCA GCACCTCGGCTATGCCG-CGCATG CCGCTGCCGCCGATT murG 183389 - 182307 - | UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase TERM 151 182487 - 182499 + g 80 -10.5 -4.07568 | CTGACGCAGCATGCG GGCCG CAC CGGCC TTTTCCAGGAAACGG ftsW 184554 - 183382 - | cell division protein FtsW murD 185897 - 184551 - | UDP-N-acetylmuramoylalanine--D-glutamate ligase TERM 152 184685 - 184627 - G 82 -15.3 -3.25918 | gap 2, opp_overlap 184670, overlap 184628 TAATCGGTAAACATA TCGGTACTGGCGCAGGCGGGCGAGAGCAG CAC CTGATCGC-CACGC-TGCGCCAGCACCGC CGCCTTCTCGACAGC TERM 153 184684 - 184628 - G 88 -18.8 -2.55069 | gap 2, opp_overlap 184670, overlap 184627 AATCGGTAAACATAT CGGTACTGGCGCAGGCGGGCGAGAGCAG CAC CTGATCGC-CACGC-TGCGCCAGCACCG CCGCCTTCTCGACAG TERM 154 185790 - 185740 - G 76 -5.9 -4.70319 | opp_overlap 185756, overlap 185741 185755 185788 TCACCAAAATGAAAA TCGACTGCTGGATAACGGCGCCG CAAGT CGGCGGCGTCTTGTAGCAGACGC GTGTCGGCCACTCGG mraY 186981 - 185899 - | phospho-N-acetylmuramoyl-pentapeptide-transferase TERM 155 186691 - 186661 - G 80 -11 -3.74872 | overlap 186651 ACCGATGGCACCAAA GGCCAGGGTGGTGA GCA CCGCCACCCAGACC AGCGGATTGCCCAGA murF 188333 - 186981 - | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase murE 189781 - 188330 - | UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase TERM 156 189612 - 189589 - G 72 -13.1 -3.01924 | opp_overlap 189590 CACTGCTCTCCAACA GGGCGGCAG CCGCAC CCGCCGCCC ACGCCTGTTGCAAAA ftsI 191552 - 189768 - | peptidoglycan synthetase FtsI TERM 157 189939 - 189915 - G 73 -9.9 -3.60296 | overlap 189917 189918 CATGGTTACCCGAAA TACCGGCGCGG CGA CCACGCCGCCA TAACGCCATCCCCGA TERM 158 189936 - 189918 - G 72 -13.8 -2.62613 | overlap 189917 189915 GGTTACCCGAAATAC CGGCGCGG CGA CCACGCCG CCATAACGCCATCCC TERM 159 190138 - 190122 - G 73 -9.3 -3.86194 | opp_overlap 190132 190134 AATCGCGGCGAGAAA GCCGGTG CCA CCCCGGC CGGTCACCCCCGTGA ftsL 191812 - 191549 - | cell division protein FtsL mraW 192767 - 191802 - | S-adenosyl-methyltransferase MraW mraZ 193219 - 192764 - | mraZ protein TERM 160 192811 - 192795 - G 74 -6.5 -4.323 | overlap 192798 CCCAAACAGGCAAAA CCATCCG CAC CGGACAG CCAGGTTTCCTGGCA TERM 161 193715 - 193733 + rH 80 -8.8 -4.14392 | opp_overlap 193712 CGTCGCCGGAAATGC GGTGCGCT CTT ACCGCACC TTTTCACCCTTACCG AFE_0218 195616 - 194246 - | polyA polymerase family protein AFE_0219 194035 - 194301 + | hypothetical protein TERM 162 195168 - 195137 - GT 81 -8.6 -4.27316 | GGCTTCAATGGAAAA TCCGAGCTGCCC CGCCAGTC GGGCGGCGCGGA AAACGCGCAGGGGGT TERM 163 195326 - 195306 - GT 78 -6.7 -4.65895 | overlap 195307 195308 GCGTTGACCGAAAAA TCTCGCCGC TGT GCGGCGATC TCCCAGGGCAGATGA TERM 164 195325 - 195307 - GT 73 -10.2 -3.39216 | overlap 195306 195308 CGTTGACCGAAAAAT CTCGCCGC TGT GCGGCGAT CTCCCAGGGCAGATG TERM 165 195324 - 195308 - GT 78 -13.7 -2.63208 | overlap 195307 195306 GTTGACCGAAAAATC TCGCCGC TGT GCGGCGA TCTCCCAGGGCAGAT AFE_0220 197364 - 195622 - | AMP-binding protein TERM 166 196494 - 196475 - G 74 -7 -4.36914 | opp_overlap 196478 196485 CCCCGGCGCAGAAAA CGCCCGAG CAGG CCCGGTCG GTCTTCGATACCTCG TERM 167 196549 - 196539 - G 73 -4.6 -4.63928 | overlap 196540 AGAGTAGTTGAAAAA CGCG CGG CACG GCGACCACTATGTTC TERM 168 197287 - 197262 - G 70 -4.6 -4.57569 | overlap 197264 TCATCGGCTGAAAAA CGTCGTCCTG TCGTTG CAGGGCGATG GTCCCGCCGGGAGCG sspA 197986 - 197366 - | stringent starvation protein A TERM 169 197922 - 197910 - GH 73 -9.1 -3.78775 | overlap 197914 TCTTCCAGCACGAAA CGCAC ACG GTGCG CGAAGACACAATCGT AFE_0222 197967 - 198086 + | hypothetical protein TERM 170 199140 - 199151 + G 76 -7.2 -4.54727 | overlap 199127 GTGGATTACGCCGAG CGGC GTGC GCCG TTTTCCTTTGCCGAC lpxC 198276 - 199190 + | UDP-3-0-acyl N-acetylglucosamine deacetylase AFE_0224 199584 - 199679 + | hypothetical protein TERM 171 200514 - 200504 - g 75 -8.2 -4.1899 | GGAGGGGATCGAAAA GGCG GAA CGCC TGATGGCGGAGAGCG secA 199695 - 202439 + | preprotein translocase, SecA subunit argJ 202449 - 203675 + | arginine biosynthesis bifunctional protein ArgJ AFE_0227 203675 - 204664 + | mutator mutT protein/thiamine-phosphate pyrophosphorylase family protein AFE_0228 204665 - 205627 + | glycosyl transferase, group 2 family protein TERM 172 206163 - 206196 + G 70 -10.2 -3.53224 | gap 1 CTACGGTGCGGCGGG GCCGCGCGAGCAGGA GGCGG TCCGGCGCGC-CGGC TTTGCCGCCGCGGTG AFE_0229 205624 - 206340 + | polysaccharide deacetylase family protein AFE_0230 206406 - 207416 + | glycosyl transferase, group 1 family protein TERM 173 208072 - 208096 + G 100 -8.5 -5.19879 | TTACGATGGCTGGCT GGCGTATAGTG ACC CGCTGTTCGCC TTTTTCTGTTTGGCG AFE_0231 207671 - 209062 + | dolichyl-phosphate-mannose-protein mannosyltransferase family protein TERM 174 209456 - 209471 + G 76 -6.8 -4.55295 | overlap 209457 GGAACAGAAGCAGGT TCCGGA TGAT TCCGGG TTTATTTCTGGCGGG AFE_0232 209110 - 210363 + | O-antigen polymerase family protein TERM 175 210970 - 210981 + G 70 -4.4 -4.52589 | opp_overlap 210975 TTGGGCATGTTGGAC GAAG ATTT CTTC TTTTATCTGGAAGAA AFE_0233 210412 - 211359 + | glycosyl transferase, group 2 family protein AFE_0234 211360 - 212157 + | lipopolysaccharide core biosynthesis glycosyl transferase rfaC 212157 - 213209 + | lipopolysaccharide heptosyltransferase 1 TERM 176 213591 - 213609 + G 80 -11.6 -3.73953 | opp_overlap 213590 213591 TGCTGCATTGCAAAT CCGGCGCG GAT CGGGCCGG TTTCATCAGCGTGCT AFE_0236 213206 - 213886 + | hypothetical protein kdtA 213883 - 215136 + | 3-deoxy-D-manno-octulosonic-acid transferase AFE_0238 216050 - 215142 - | lipid A biosynthesis lauroyl acyltransferase TERM 177 216007 - 216017 + g 78 -4.6 -4.86621 | opp_overlap 215994 215993, overlap 215997 ATGCCCGCTGCCAGC GTGG CCA CCGC TTTTTGCTTCAGGCT AFE_0239 217308 - 216151 - | aminotransferase, class II AFE_0240 219413 - 217305 - | hypothetical protein TERM 178 218137 - 218104 - G 71 -6.7 -4.16016 | gap 1, opp_overlap 218105 218106, overlap 218105 GCATGCTGGAAGAAA TGGCGGCGGAAGGC ATAGCGG GCCTCCCGCTGC-A TTTCGTTGCCGAGAC TERM 179 219318 - 219305 - G 71 -6.7 -4.1899 | CCAGGTGATCGAAAA GCTGT TCAT ACAGC GAAAAAGTCTCGTGA AFE_0241 219972 - 219457 - | RNA methyltransferase, TrmH family, group 2 comF 220774 - 219983 - | competence protein bioF 220808 - 221977 + | 8-amino-7-oxononanoate synthase bioH 221974 - 222738 + | bioH protein TERM 180 222733 - 222755 + F 72 -4.1 -4.72272 | CTGCTGGAGACCTGG GGATGAGTT CCGGC AACCCGTCC TTTTTCATGGAAAAA TERM 181 222786 - 222771 - g 76 -6 -4.65895 | opp_overlap 222771 222772, overlap 222773 TTTTTCATGGAAAAA CGCGCC GTGC GGCGGG CTTTCGAGCAGGCAG TERM 182 223568 - 223578 + G 74 -3.2 -4.8048 | CCTTCCGCGTGAAGA CGGT AGT ATCG TTTTTCCTCTCACGC bioC 222735 - 223613 + | biotin synthesis protein BioC bioD-2 223610 - 224314 + | dethiobiotin synthetase TERM 183 224580 - 224607 + G 84 -9.1 -4.47183 | CGCGGACCTGCTCTG GGCGCTGCTGA TCGGTT TTGGCGGCGCC TTTATTTCGCTACTG TERM 184 225175 - 225157 - g 70 -4.4 -4.56597 | opp_overlap 225161 TCGGCCCTGCAAAAA CTGCAGCG GGG CGCGGAAG CCCTGCATGTGGTGC htpX-2 224428 - 225324 + | heat shock protein HtpX aat 225371 - 226096 + | leucyl/phenylalanyl-tRNA--protein transferase ate 226099 - 226809 + | arginine-tRNA--protein transferase TERM 185 226980 - 227012 + G 74 -4.1 -4.78107 | gap 1, overlap 226982 226990 227000 227001 227003 GGGATCATGGGGTTT CTGCTGG-GTTGGC TGTTCC GCCAGCATCAGCCG TTTTTGCTGGTGCTC AFE_0250 226806 - 227585 + | hypothetical protein TERM 186 227604 - 227621 + G 70 -3.4 -4.60487 | gap 1 CTGATGGCGGCTTTG GCCG-GA CGGTT TCGCGGC TTTTTGCCGGTAGTG rnt 227592 - 228197 + | ribonuclease T AFE_0252 228273 - 229289 + | CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase reductase, putative AFE_0253 229352 - 229720 + | hypothetical protein TERM 187 229749 - 229781 + T 100 -19.1 -3.85698 | opp_overlap 229753, overlap 229750 CGGTTTTCCACGTAC AGAAGCCCCCGGCGC CGA GCGACGGGGGCTTCC TTTATAAAGCGCGGC TERM 188 229750 - 229780 + T 100 -22.6 -2.91276 | opp_overlap 229753, overlap 229749 GGTTTTCCACGTACA GAAGCCCCCGGCGC CGA GCGACGGGGGCTTC CTTTATAAAGCGCGG TERM 189 229777 - 229753 - T 100 -18.5 -3.51924 | opp_overlap 229750 229749 TTTCCACGTACAGAA GCCCCCGGCGC CGA GCGACGGGGGC TTCCTTTATAAAGCG TERM 190 229804 - 229815 + T 75 -5.8 -4.65895 | opp_overlap 229791 229790, overlap 229791 AGCGCGGCGGCGGCG GCGT TCTA ACGC TTTTTGCATCCCCGC AFE_0254 231051 - 230113 - | hypothetical protein TERM 191 231032 - 231017 - G 91 -4.6 -5.52807 | overlap 231019 AACAACAAAGAAAAA GACAGG TCTC CCTGGC TGGGAGTGTGGGTAA TERM 192 231030 - 231019 - G 71 -5.8 -4.35561 | overlap 231017 CAACAAAGAAAAAGA CAGG TCTC CCTG GCTGGGAGTGTGGGT TERM 193 231302 - 231278 - g 77 -14.3 -2.75481 | CTTGAAGGCGAAGGA CGGCAGCGG ATTCTGG CCGCTGCCG AAAAGCTCTTTTCCG AFE_0255 231155 - 231886 + | transcriptional regulator, TetR family argB 231883 - 232755 + | acetylglutamate kinase AFE_0257 233851 - 232838 - | secretion protein, HlyD family TERM 194 233362 - 233403 + g 89 -12.9 -4.08216 | gap 1, overlap 233363 233395 GCTGCGCCTGGGTCT CCGCCAGGGC-CGCCTGATC TGC GGTCAGGCGCGCCCCGGCAC TTTTCGCCGCGGTCA TERM 195 233363 - 233402 + g 83 -16.4 -3.04715 | gap 1, overlap 233362 233395 CTGCGCCTGGGTCTC CGCCAGGGC-CGCCTGATC TGC GGTCAGGCGCGCCCCGGCA CTTTTCGCCGCGGTC AFE_0258 234088 - 234654 + | hypothetical protein TERM 196 234663 - 234687 + T 100 -16.4 -3.30441 | CTCCTGATGTACACC GGGGCCGGCC CGTCC GGCTGGCCCC TTGTCGCCGATCGTC bioB 235651 - 234701 - | biotin synthase AFE_0260 235998 - 235648 - | conserved hypothetical protein TIGR00251, putative AFE_0261 236301 - 236023 - | YGGT family protein proC 237125 - 236298 - | pyrroline-5-carboxylate reductase AFE_0263 237790 - 237122 - | conserved hypothetical protein TIGR00044 TERM 197 237493 - 237461 - G 100 -23.5 -3.14944 | GATCAGCACATTCAA CGGCTCCATGCCGGC GCG GGCGGCATGGAGCCG TTCCGCGATGAGTGG pilT-2 237892 - 238941 + | twitching motility protein PilT pilT-1 238951 - 240081 + | twitching motility protein PilT TERM 198 240770 - 240752 - gT 77 -8.1 -4.08216 | gap 1, opp_overlap 240764, overlap 240753 GGAGGCGCTCGAAAA GGCCGGCG GGTT CGCC-GCC ATGCGTGCCGCACGC AFE_0266 240009 - 241235 + | glycosyl transferase, group 2 family protein sqr 242422 - 241295 - | sulfide quinone reductase, putative TERM 199 241969 - 241940 - G 73 -9.9 -3.64184 | overlap 241942 241943 AAAGAGCAGTTCAAA GACCGGACCACCG CGTA CGGCGGTCGGCTC CAGGGGATTGCCGGC TERM 200 242481 - 242447 - R 73 -5.7 -4.4891 | gap 1, overlap 242458 CTCAGTAGCAGAAAA CGTG-GAAGGAAGCCG CAAT CGGCCCCGTTCACACA GTATACTGCATCCGC AFE_0268 243164 - 242547 - | hypothetical protein TERM 201 242734 - 242752 + g 82 -11.8 -3.88291 | ACTTCCATTCGCACT TTTTCGCG CTG CGCGAAAA TTTCTGGAAATGCTG AFE_0269 243866 - 243177 - | metallo-beta-lactamase family protein TERM 202 243637 - 243580 - G 79 -8.3 -4.4891 | gap 1 CCCAGCACGATAAAA TCGTCATCATCCACTAGTACGTCCGCAC AGG GCGCGG-CGGCCCCGCGGCTGATCACGA CCTGCGCACCGGTGC AFE_0270 244708 - 244007 - | transcriptional regulator, Crp/Fnr family trmB 245388 - 244705 - | tRNA (guanine-N(7)-)-methyltransferase TERM 203 244961 - 244977 + g 75 -2.9 -5.00616 | opp_overlap 244947, overlap 244947 244959 TCCGGCTGGATAAGG CGGCG TTTTTGT TGCCG TTTTTTAGGCCACGG purE 245435 - 245932 + | phosphoribosylaminoimidazole carboxylase, catalytic subunit TERM 204 246300 - 246342 + G 70 -10.5 -3.56099 | gap 2, overlap 246313 GCCTTTCGCAGTGCT GCGCAGCGCCGCCGACCTGGC AAC GGCAG--CGGCGGCGGTGCCC TTTCCGGCCATTCTC TERM 205 246657 - 246630 - g 70 -9.9 -3.56092 | gap 2, opp_overlap 246629 246628 246632 246653 GGAGCAGGCGCGAAA CAGCGCCGCACGG ATTG CCG-G-GGCGCTG GATTATGTCGGCGTG purK 245929 - 247062 + | phosphoribosylaminoimidazole carboxylase, ATPase subunit AFE_0274 247632 - 247096 - | disulfide bond formation protein B, putative AFE_0275 248216 - 247605 - | thiol:disulfide interchange domain protein AFE_0276 249883 - 248213 - | dolichyl-phosphate-mannose-protein mannosyltransferase family protein TERM 206 248401 - 248420 + g 73 -4.8 -4.63527 | opp_overlap 248375 248401, overlap 248403 GGCCATCGGCAACGA CGCGCCGG ATCT CCTGCGGG TTTTTCAACTGATGC TERM 207 248719 - 248736 + g 89 -6.9 -5.0538 | opp_overlap 248699, overlap 248721 GGCCCAGATAGGCCA TGCCGCC CAGG GGCGGAA TTTTTTCCGGTACCA TERM 208 249366 - 249394 + g 70 -3.1 -4.59773 | gap 1 GCCAACCCCATCGCT GCGTAG-GCGAT CAGATA GTCGCGCTCCGC TTTTTCCGGGTAAAG TERM 209 249729 - 249741 + g 71 -6.3 -4.41616 | GGGACCACCAGGTTG TGATG CAC CATCA TTTCTTTCAGAGCCT smpB 250337 - 249876 - | SsrA-binding protein TERM 210 250831 - 250817 - g 100 -11.4 -5.01732 | AAGGGCTGGAAAAAA GGCTGC GAC GCAGCC ACCGACGCATCATCG TERM 211 250959 - 250981 + G 100 -12 -5.88471 | TGCCTGTCGTGGCCA CCTGGCGG AACAAGG CCGCCAGG TTTTTTTTCGTCATC AFE_0278 250534 - 251634 + | phospholipase D family protein AFE_0280 251644 - 252129 + | hypothetical protein AFE_0279 252473 - 252126 - | lipoprotein, SmpA/OmlA family fur 252540 - 253016 + | ferric uptake regulation protein proB-3 254143 - 253013 - | glutamate 5-kinase TERM 212 254079 - 254100 + g 72 -2.3 -4.82901 | gap 1, overlap 254081 AGGCCCTGACCGTTA TTGGTGAGCA GGC TGCT-GCCGA TTTTTATGACCCAGC AFE_0283 255264 - 254140 - | GTP-binding protein Obg/CgtA TERM 213 254670 - 254641 - G 76 -9.2 -4.05714 | ATCGGCAAGCACAAA GGACTCGTGCGC TGCGAC GCGCACGACGCC GAGATTGGGGTACAA TERM 214 255298 - 255272 - R 100 -13.7 -4.98522 | gap 1, overlap 255289 255290 AATTTCATAGAAAAA CCCCGCACCCGC AAAA ACGGG-GCGGGG TCCCTCCGGGCGGCA rpmA 255580 - 255320 - | ribosomal protein L27 rplU 255903 - 255592 - | ribosomal protein L21 AFE_0286 257636 - 256086 - | sulfate transporter family protein TERM 215 256848 - 256827 - G 78 -10.1 -3.87373 | opp_overlap 256840 CAGACTGGTGATAAA GGTGAGGGC GATG GCCGTCACC CAGACGGCTTTCGAT AFE_0287 258275 - 257646 - | carbonic anhydrase TERM 216 258417 - 258399 - RH 100 -7.4 -5.72616 | opp_overlap 258399 258411, overlap 258412 ATGGACATAAAAAAA GCCCTC GAAAAAA GAGGGC TTCCTCATGGCTTCA TERM 217 258423 - 258412 - RH 84 -5.8 -5.01732 | opp_overlap 258399 258411, overlap 258399 AAGCCCTCGAAAAAA GAGG GCTT CCTC ATGGCTTCAGGGGAG metE 260797 - 258443 - | 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase TERM 218 260223 - 260205 - GH 77 -8.1 -4.17316 | gap 1, opp_overlap 260220 AGCCGGTCAAAACAA GCGGCCCC GATC GGGG-CGC CATGGCCATGACAGG AFE_0290 260783 - 260896 + | hypothetical protein ubiE 261678 - 260893 - | ubiquinone/menaquinone biosynthesis methlytransferase UbiE AFE_0291 262382 - 261726 - | glutathione S-transferase family protein metW 263007 - 262402 - | methionine biosynthesis protein MetW metX 264155 - 263004 - | homoserine O-acetyltransferase AFE_0294 264373 - 265125 + | hypothetical protein glyA 265259 - 266503 + | serine hydroxymethyltransferase nrdR 266510 - 267001 + | transcriptional regulator, NrdR family TERM 219 267678 - 267696 + G 85 -7.3 -4.72986 | overlap 267679 GACAGCCATCTGCGC ACGCCGC CGGAT GCGGCGC TTTTTGGTACACCTG TERM 220 267679 - 267695 + G 70 -10.8 -3.4331 | overlap 267678 ACAGCCATCTGCGCA CGCCGC CGGAT GCGGCG CTTTTTGGTACACCT TERM 221 267749 - 267785 + G 86 -13.5 -3.44443 | overlap 267742 267750 GCAGGATGCTCCTGT TGCCGCCCGGGCGGCGC TAT GCGCTGCCGGTGCGGAG TTGCTGTTCTGTCGC TERM 222 267750 - 267784 + G 76 -14.8 -2.66183 | overlap 267749 267742 CAGGATGCTCCTGTT GCCGCCCGGGCGGCGC TAT GCGCTGCCGGTGCGGA GTTGCTGTTCTGTCG ribD 266991 - 268091 + | riboflavin biosynthesis protein RibD ribE 268095 - 268751 + | riboflavin synthase, alpha subunit TERM 223 269029 - 269051 + G 88 -13.4 -3.62096 | GGTGTCGATTGAGGC TGCCCGCGGT GTC ACCACGGGCA TTTCCGCTGCTGACC TERM 224 269690 - 269680 - g 71 -8.2 -4.08767 | CGCATTGCCTGAAAA GCCC AAG GGGC CCGGTCAGGCGGGTG ribBA 268748 - 269881 + | 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II ribH 269878 - 270342 + | 6,7-dimethyl-8-ribityllumazine synthase nusB 270353 - 270796 + | transcription antitermination factor NusB AFE_0302 270924 - 271205 + | hypothetical protein TERM 225 271402 - 271420 + G 70 -3.8 -4.64657 | overlap 271404 TAAACGATTCCTTCC TGCTGTCT GTG GGGCAGTA TTTTTGGCGCTTTCC AFE_0303 271364 - 271936 + | hypothetical protein AFE_0304 272307 - 271954 - | hypothetical protein ubiB 274044 - 272362 - | 2-polyprenylphenol 6-hydroxylase TERM 226 274121 - 274102 - RH 100 -12.1 -5.40072 | GCCGCCGCAAAAAAA GCGGGCC TTGGCT GGCCCGC ATCTGCAATATTTGG AFE_0306 274797 - 274144 - | OmpA family protein AFE_0307 274789 - 274986 + | hypothetical protein tuf-2 275372 - 276562 + | translation elongation factor Tu TERM 227 276585 - 276602 + F 74 -9.8 -3.63627 | TGATGTAGTGTTGAA CGGCGG CACTGT CCGCCG TTTGCCGTCTGCAGG TERM 228 276872 - 276889 + G 77 -3.3 -5.00616 | GCTTCCAGCAACAAC GGCAAGG CGCT CCTGGTC TTTTTTCGGGAAGCA secE 276713 - 277063 + | preprotein translocase, SecE subunit nusG 277064 - 277597 + | transcription termination/antitermination factor NusG rplK 277651 - 278079 + | ribosomal protein L11 rplA 278083 - 278775 + | ribosomal protein L1 TERM 229 278869 - 278892 + F 78 -13.2 -2.54896 | gap 1, overlap 278864 CCCTGCGTAGGCGAC GGCGCGCCAGA TCT TCTGGC-CGCC TCGGTTAGATAGGAG rplJ 278919 - 279440 + | ribosomal protein L10 rplL 279470 - 279856 + | ribosomal protein L7/L12 AFE_0319 279977 - 279879 - | hypothetical protein TERM 230 280330 - 280313 - g 70 -3.3 -4.65895 | overlap 280315 280316 280318 GCGGTTATGGAAAAA GACGACA CCAC TGGCGCC AAAAGAGTCAAAGAC TERM 231 280448 - 280460 + G 70 -3.3 -4.69053 | GTCTCGCAGTTGCAT CGTTC GCC GGGCG TTTTCTTCGATCATG TERM 232 283254 - 283242 - g 71 -5.5 -4.37092 | AGCCCGGTGATAAAA TGGCA GGC CGCCA TGGGAATAAGGGCGT rpoB 279980 - 284068 + | DNA-directed RNA polymerase, beta subunit TERM 233 285000 - 284990 - g 74 -3.2 -4.8622 | GTGCGCAACGAAAAA CGCA TGT TGCA GGAAGCCGTGGACGC rpoC 284102 - 288256 + | DNA-directed RNA polymerase, beta' subunit rpsL 288366 - 288737 + | ribosomal protein S12 rpsG 288764 - 289234 + | ribosomal protein S7 TERM 234 290963 - 290983 + G 70 -3.2 -4.62872 | TTGCCGGCTTCCCAG TGGTGGAC GTCAA GGTCACCA TTTTTGACGGTTCAT fusA 289267 - 291366 + | translation elongation factor G tuf-1 291387 - 292577 + | translation elongation factor Tu TERM 235 292660 - 292680 + G 70 -10.3 -3.52113 | opp_overlap 292659 292660, overlap 292659 GGAAATCGTAGAAAC CGCACGCCG GAC CGGTGCGCG TGTTTGTGGCCCGAT rpsJ 292577 - 292885 + | ribosomal protein S10 rplC 292903 - 293535 + | ribosomal protein L3 TERM 236 293599 - 293609 + G 78 -4.6 -4.82154 | opp_overlap 293584 CAGCGAAATCGAGAT CGCC GAT GGTG TTTTTGGTGTGCCTT rplD 293546 - 294163 + | ribosomal protein L4 TERM 237 294226 - 294215 - g 85 -5.8 -5.1101 | TGATCAGTGAAAAAA GCAC GATG GTGC AGCAGCAGGCGAATC rplW 294160 - 294453 + | ribosomal protein L23 TERM 238 294508 - 294491 - g 71 -6.9 -4.23781 | opp_overlap 294490 294496 CTGATTAAAACCAAA CCGACCT CTGC AGGGCGG CGTTTCGTGGTAAAA rplB 294470 - 295294 + | ribosomal protein L2 rpsS 295313 - 295588 + | ribosomal protein S19 rplV 295600 - 295935 + | ribosomal protein L22 TERM 239 295968 - 295956 - g 84 -4.1 -5.26316 | overlap 295957 295961 CTATGGGACAAAAAA CCAAT CCA ATCGG ACTGCGTCTGGGAAT rpsC 295919 - 296605 + | ribosomal protein S3 rplP 296618 - 297034 + | ribosomal protein L16 rpmC 297031 - 297228 + | ribosomal protein L29 rpS17 297225 - 297500 + | ribosomal protein S17 rplN 297497 - 297865 + | ribosomal protein L14 rplX 297875 - 298195 + | ribosomal protein L24 rplE 298210 - 298752 + | ribosomal protein L5 rpsN 298766 - 298951 + | ribosomal protein S14 rpsH 298961 - 299356 + | ribosomal protein S8 TERM 240 299389 - 299371 - g 71 -5.3 -4.41047 | AGGGGGGAACGAAAA TGTCTCG TGTAG CGAAACA ACCAGTGCCGCTGCC TERM 241 299792 - 299780 - g 77 -3.4 -5.0065 | GATCGATAAACAAAA GATC GGACA GATC GCTGCAGATATCCGT rplF 299370 - 299894 + | ribosomal protein L6 rplR 299913 - 300266 + | ribosomal protein L18 rpsE 300279 - 300809 + | ribosomal protein S5 rpmD 300802 - 300987 + | ribosomal protein L30 rplO 300984 - 301421 + | ribosomal protein L15 secY 301421 - 302752 + | preprotein translocase, SecY subunit adk 302755 - 303411 + | adenylate kinase infA 303412 - 303630 + | translation initiation factor IF-1 rpmJ 303639 - 303752 + | ribosomal protein L36 rpsM 303816 - 304172 + | ribosomal protein S13 rpsK 304190 - 304585 + | ribosomal protein S11 rpsD 304606 - 305232 + | ribosomal protein S4 rpoA 305255 - 306274 + | DNA-directed RNA polymerase, alpha subunit rplQ 306305 - 306679 + | ribosomal protein L17 TERM 242 306703 - 306724 + T 100 -8.7 -5.86061 | gap 1, opp_overlap 306703 ATCGTGATCAGAAAA CCGGCCCATC GTT GGTG-GCCGG TTTTTTTTGCTCAGG TERM 243 306724 - 306703 - T 75 -6.5 -4.4648 | gap 1, opp_overlap 306703 ATCGTGATCAGAAAA CCGGCCCATC GTT GGTGG-CCGG TTTTTTTTGCTCAGG dut 307295 - 306843 - | deoxyuridine 5`-triphosphate nucleotidohydrolase coaBC 308544 - 307288 - | phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase radC 308577 - 309251 + | DNA repair protein RadC TERM 244 309276 - 309259 - g 100 -4.7 -5.75342 | opp_overlap 309269 309270 309274, overlap 309261 309262 GTTGGTGAAAAAAAA CAGCGCC TTAT GGCGGCG CGCCCTTTTTGCGGG TERM 245 309277 - 309261 - g 76 -6.5 -4.52949 | opp_overlap 309269 309270 309274, overlap 309259 309262 TGGTGAAAAAAAACA GCGCC TTATGGC GGCGC GCCCTTTTTGCGGGG TERM 246 309269 - 309281 + G 70 -4.7 -4.57073 | opp_overlap 309262 309259 309261, overlap 309270 309274 309277 AAAAACAGCGCCTTA TGGCG GCG CGCCC TTTTTGCGGGGCGTG TERM 247 309525 - 309581 + G 89 -17.4 -3.22475 | overlap 309525 CGCGCGCGAAGGATT GCGGCGCGGCGG-CGGTGCTGGTGCTGA GCT TCACCGC-AGTACTGATCGCCGCGCTGC TGTTATGGCGGTACC dgkA 309248 - 309613 + | diacylglycerol kinase AFE_0360 309617 - 310363 + | PAP2 family protein TERM 248 310846 - 310864 + G 74 -6.6 -4.40561 | GGTTGTGGTATCATG CGCTACGC ACA GGGTGGCG TTATTTTTCCCGGAA AFE_0361 310347 - 310886 + | hypothetical protein AFE_0362 310910 - 311266 + | hypothetical protein AFE_0363 311378 - 311755 + | hypothetical protein TERM 249 311815 - 311847 + GF 100 -18.5 -3.14564 | opp_overlap 311813 TCAGCGCGGAAGAGG TGGAGACGGCCATCC AGC GGATGGCCGTTGCCA TTAATGAAGAGATGG TERM 250 312263 - 312283 + GF 74 -6.7 -4.3613 | GCTGGATGCCCGCGG CCTGGGGCG GAA TGCACCGGG TATTTTTGTTTTGCC AFE_0364 311727 - 312311 + | hypoxanthine-guanine phosphoribosyltransferase, putative mtaP 312311 - 313123 + | methylthioadenosine phosphorylase gor 314495 - 313146 - | glutathione reductase TERM 251 314570 - 314533 - R 83 -12.1 -3.70853 | gap 1, overlap 314565 TGAACGAGGCAAGAA GGAC-GTCATCCCCGGCA TAC TGCTGGAGATGACCATCC GAAGGGATGTGCCCT TERM 252 314586 - 314602 + r 71 -8.1 -3.88291 | overlap 314571 GAAGGGATGTGCCCT TATTTCC CGT GGAAATA TTTCTCCAGGTCGTC AFE_0367 315328 - 314585 - | AhpC/TSA family/glutaredoxin domain protein serB 316447 - 315464 - | phosphoserine phosphatase mfd 320028 - 316579 - | transcription-repair coupling factor TERM 253 318590 - 318551 - G 76 -9.3 -4.08767 | gap 1, opp_overlap 318549 318551 GCCATGCCCTGAAAA CGGCCGATGCCGTATTCC TCATG GGTA-ACGGCATCACCCG GCTGTAACTCGCCGA TERM 254 318698 - 318684 - G 78 -4.2 -4.77036 | CGCGATCACCAAAAA TCTGCG CCT CGGAGA CCAGCGCCAGTCTGA ispD 320180 - 320893 + | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase ispF 320904 - 321377 + | 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase TERM 255 321878 - 321849 - g 77 -14.4 -2.7185 | opp_overlap 321849 AGGATTCCCCAACTA TTTCGGTGCCCA GCGCTT CGGGCACCGAAA TTTGCAAGAGGCCGC TERM 256 321849 - 321878 + G 86 -13.7 -3.53012 | opp_overlap 321849 AGGATTCCCCAACTA TTTCGGTGCCC AGCGCTTC GGGCACCGAAA TTTGCAAGAGGCCGC TERM 257 322346 - 322358 + G 84 -3.3 -5.1675 | opp_overlap 322346, overlap 322342 GGGAGGATGCACAGA CTCTG ATT CTGAG TTTTTTCCTCCCTGC truD 321370 - 322458 + | tRNA pseudouridine synthase D TERM 258 322674 - 322688 + G 71 -5.6 -4.37886 | opp_overlap 322653, overlap 322672 322669 CTATGACGGTGAAGC CGAAGC GCG GCTGCG TTTTATCCGGCGTGC TERM 259 322865 - 322847 - g 73 -8.8 -3.92542 | CCGATTTGCAAAGAA TGCGCACG GTC CTTGCGCA ACAGGTCGACTGCTG AFE_0373 322534 - 323010 + | transcriptional regulator, MerR family TERM 260 323055 - 323073 + T 78 -12.4 -3.1855 | opp_overlap 323054 323055 CGGCCCCGGTTAAAG GCCCGATC TAT GGTCGGGC TTGCCTATTCGCGAC AFE_0374 323656 - 323078 - | Smr domain protein trxB 324631 - 323660 - | thioredoxin-disulfide reductase TERM 261 324701 - 324657 - H 100 -12.7 -4.41348 | gap 1, opp_overlap 324659, overlap 324653 324658 324659 TTGCCTGTAAAGAAA CGGTACCGCGCCGG-CCCGC TGCATG GCGGAACCGGCGCGGGCCAG CGGAGAACTTCTGGA TERM 262 324699 - 324658 - H 87 -13.7 -3.24488 | opp_overlap 324659, overlap 324653 324657 324659 TGCCTGTAAAGAAAC GGTACCGCGCCGG-CCCGC TGCATG GCGGAACCGGCGCGGG-CC AGCGGAGAACTTCTG TERM 263 324699 - 324659 - H 78 -13.9 -2.54371 | gap 1, opp_overlap 324659, overlap 324653 324658 324657 GCCTGTAAAGAAACG GTACCGCGCCGG-CCCGC TGCATG GCGGAACCGGCGCGGGCC AGCGGAGAACTTCTG TERM 264 325450 - 325486 + H 71 -11.6 -2.88579 | gap 1 CGTGTTTTTGCTCAC CGGTAT-GGCCGGCGCA ATGG TGCGCGGGCCCATACCC TGTATGCGGCCTTGC TERM 265 326046 - 326062 + H 71 -10.1 -3.60098 | opp_overlap 326029 CCACCGGCGCACGGT GCGCCTC TCC GAGGTGC TTTCCAGTCACGGCT AFE_0377 327167 - 327859 + | outer membrane lipoprotein carrier protein LolA, putative TERM 266 328304 - 328291 - g 77 -3.1 -5.00884 | opp_overlap 328294 ATCTTCGCTAAAAAA TGACC TGCG GATCA TTGATGTGAATCCGG AFE_0378 327878 - 328948 + | outer membrane protein transport protein, OMPP1/FadL/TodX family AFE_0379 328976 - 330304 + | ATPase, AAA family TERM 267 330754 - 330778 + G 76 -6.9 -4.55023 | TCATCGATTTTGCGG CGGGCGCACGC CTT GCCGGCACCCG TTTTGTGGTATTGCG serS 330297 - 331562 + | seryl-tRNA synthetase AFE_0381 331566 - 331799 + | hypothetical protein AFE_0382 331796 - 332839 + | ErfK/YbiS/YcfS/YnhG family protein TERM 268 334766 - 334755 - f 83 -5.8 -4.86731 | CTCCTTTAAAGAAAA GGGT CTAG ACCC CACACACGCCACTCG TERM 269 335685 - 335673 - f 71 -6.2 -4.2354 | GAAAGGCGAAAAGAA CCGC GGAGA GCGG AGTGAAATAGATCCT TERM 270 338152 - 338120 - f 72 -11.1 -3.14132 | overlap 338122 CCTTCCCTTCAGCAA CACCTCGAGCGCGGC ACA GCCGCGCCCGGGACC AGACCAGTTTTAACC TERM 271 338149 - 338122 - f 100 -17 -3.13403 | gap 1, overlap 338120 TTCCCTTCAGCAACA CCTCGAGCGCGGC ACA GCCGCGCCCG-GG ACCAGACCAGTTTTA TERM 272 338299 - 338331 + F 100 -16.4 -5.0133 | GACACCTATACCCCT CAACCCCGCCTC AGCAATATC GAGGCGGGGTTG TTTTTTGGCGCGATC TERM 273 338362 - 338390 + F 83 -10.4 -4.03234 | opp_overlap 338368, overlap 338368 CTGCGTATGATGCGC AAAAAAGTGGGC CAAGT GCCCACTTTTTG TTTCTGTGCAGGGAA TERM 274 338368 - 338384 + F 100 -9.4 -5.42975 | opp_overlap 338368, overlap 338362 ATGATGCGCAAAAAA GTGGGC CAAGT GCCCAC TTTTTGTTTCTGTGC TERM 275 338384 - 338368 - f 100 -9.4 -5.03715 | opp_overlap 338368 338362 ATGATGCGCAAAAAA GTGGGC CAAGT GCCCAC TTTTTGTTTCTGTGC AFE_0389 338414 - 338866 + | lipoprotein, putative TERM 276 339174 - 339154 - g 80 -10.3 -4.08767 | GCGATGCCCGGAAAA CCCGCCCCG AAG CGGAGCCGG GTGACTACCTCGAAG TERM 277 339365 - 339348 - g 70 -3.3 -4.69027 | overlap 339350 AAACGCATGGAAAAA GGCAACG CCAT CGTCGAC ATGGGGCGCGCCGAG TERM 278 339470 - 339486 + G 100 -9.3 -5.27335 | GGATGTACGTCGCGT GCAGCGG GGG CCGCAGC TTTTTCTTTCGCGGA nusA 338898 - 340379 + | transcription termination factor NusA TERM 279 341138 - 341128 - g 83 -2.4 -5.2696 | overlap 341129 CCAAAAGGCAAAAAA GCGG GGC CGGC TGGACGCGGCGGCGA infB 340438 - 343065 + | translation initiation factor IF-2 TERM 280 343418 - 343460 + G 72 -11.2 -3.31263 | opp_overlap 343411 GCGGAAATGGCGGAA CTCCTGGCCCATCTTCCGCC CGC GCCGGAGGATCTGCCATGAG TTGTCAGCATGGCCT rbfA 343073 - 343459 + | ribosome-binding factor A truB 343456 - 344337 + | tRNA pseudouridine synthase B rpsO 344376 - 344645 + | ribosomal protein S15 TERM 281 345912 - 345928 + G 71 -8 -4.07877 | GACCGACAGCGAATT CCCGTA CAGCT TACGGG TTGTTTCTGAGGTAC pnp 344662 - 346734 + | polyribonucleotide nucleotidyltransferase TERM 282 346781 - 346815 + F 93 -15.8 -3.09834 | opp_overlap 346788, overlap 346789 GTTGAGCGCCAATGG CGACACAGGTGGACCG CTA CGGTCCACTTTTGTTG TTCCCTCCTGACATG TERM 283 346808 - 346788 - f 71 -11.1 -2.89742 | opp_overlap 346781 346789 GCCAATGGCGACACA GGTGGACCG CTA CGGTCCACT TTTGTTGTTCCCTCC TERM 284 346789 - 346807 + F 100 -14.6 -4.91084 | opp_overlap 346788, overlap 346781 CCAATGGCGACACAG GTGGACCG CTA CGGTCCAC TTTTGTTGTTCCCTC TERM 285 347043 - 347005 - g 70 -10.3 -3.54129 | gap 1, opp_overlap 347032 CATATGCTCTTCAAA GGCAGCACGGAGCGCGAT GGCG AT-GCGCTCAATGCGGCC ATGGAGTCGTTGGGC TERM 286 347470 - 347501 + G 75 -7.8 -4.25104 | overlap 347471 TTCGGGGGGCCGCAC GGGGGGGCTCGTAC GGCA GTGCCCGCCCCCCG TTTTCATGGCGGACA TERM 287 347532 - 347520 - g 70 -10.5 -3.48924 | opp_overlap 347523, overlap 347521 TCATGGCGGACAGAA GCGGC TGC GCCGC GCCCAGGCGCAGCAG AFE_0396 346789 - 348063 + | peptidase, M16 family AFE_0397 348818 - 348066 - | hydroxyacylglutathione hydrolase, putative TERM 288 349076 - 349086 + G 77 -8.2 -4.37886 | GACCATTCTGCAGCT CGGG CAA CCCG TTTTCTGGGGACTGC TERM 289 349431 - 349471 + G 71 -6.8 -4.23999 | gap 1, overlap 349432 CTGGGACGACTGCGC GGTCTGCTCGAGGAGCAGG GTTT CGTGCTCCGCGAG-GGACG TTATTTTCAATATAC AFE_0398 348927 - 349724 + | hypothetical protein rnhA-2 349706 - 350182 + | ribonuclease HI dnaQ 350173 - 350919 + | DNA polymerase III, epsilon subunit AFE_0401 351334 - 350924 - | roadblock/LC7 domain protein gloA 351833 - 351426 - | lactoylglutathione lyase AFE_0403 352161 - 351844 - | hypothetical protein argG 353365 - 352166 - | argininosuccinate synthase argF 354304 - 353369 - | ornithine carbamoyltransferase TERM 290 354104 - 354091 - G 84 -9.5 -4.54727 | GCGGCGAAAGGAAAA GGGCG TGGC CGCCC AATTGGGCCATGCCC argD 355467 - 354301 - | acetylornithine aminotransferase AFE_0407 356693 - 355467 - | aspartate kinase, monofunctional class AFE_0408 357121 - 356801 - | hypothetical protein AFE_0409 357651 - 357166 - | hypothetical protein AFE_0410 357793 - 357635 - | hypothetical protein AFE_0411 358016 - 357771 - | hypothetical protein TERM 291 357982 - 357959 - G 84 -10.2 -4.25658 | gap 1, overlap 357956 ATTTCACGAAAATAA CCCCGGCCAGC ATC GC-GGCGGGGG GTGCGGATGGTGGGG AFE_0412 358228 - 358052 - | addiction module toxin, Txe/YoeB family AFE_0413 358669 - 358292 - | PIN domain protein AFE_0414 358920 - 358675 - | prevent host death protein TERM 292 359302 - 359281 - g 71 -6.5 -4.20531 | GACATCGACCGAAAA TCTGGAGCG CCGG CGCCGCAGA AAGTGCGCATGGGTG AFE_0415 359224 - 359421 + | hypothetical protein TERM 293 359427 - 359450 + F 83 -7.4 -4.63218 | gap 1 GCTTTGCTGATGGTG GTG-CGCATCC CTG GGGTGCGACGC TTTTCTTCGAAACAC AFE_0416 359479 - 360015 + | pilin, putative TERM 294 360028 - 360053 + F 100 -16.3 -4.4715 | opp_overlap 360020 360023, overlap 360026 TAAGTAACTATGCGC TTGGAGCCTAG CCTT CTAGGCTCCAA TTTTATGCCTTGCAG AFE_0417 360329 - 360574 + | hypothetical protein TERM 295 360678 - 360632 - g 100 -23.6 -3.31792 | CCATCATCTCCAGAA CCGGCGCCACGCCCTGCTCCAG CGG CGCGAGCAGCGCGGGGCGCCGG TCGCGTCCATCGACA AFE_0418 360588 - 360803 + | hypothetical protein TERM 296 361736 - 361722 - g 74 -3.5 -4.78107 | CACCAGCACCAAAAA TCCGG CCTAC CCAGA TTTGCTGTATGTCGA tal 360910 - 362001 + | transaldolase fabI 362808 - 362035 - | enoyl-(acyl-carrier-protein) reductase TERM 297 362752 - 362785 + g 76 -5.9 -4.66609 | gap 1 GATGCCCCAGCAGAT GGAGC-GGTCATTGGC CAC GCCGACGATCAGCGCC TTTTTCCCTACCATG mltD 364671 - 362833 - | membrane-bound lytic murein transglycosylase D gltX-2 364896 - 366296 + | glutamyl-tRNA synthetase AFE_0423 366408 - 368345 + | aconitate hydratase, putative icd 368348 - 369634 + | isocitrate dehydrogenase, NADP-dependent TERM 298 369612 - 369627 + F 71 -8.2 -3.85817 | CCGCGGAGTTCAGTG CGGCGC TGAT GCGTCG TTTGTGAGGAAACAT TERM 299 370072 - 370104 + G 74 -6.2 -4.54477 | gap 1 CTCCCGGCCCGAGGC CCTGCACCGGG-TCG TGGT CGAGCCCAGTACGGG TTTTCTGCCTTTTCA sucC 369644 - 370807 + | succinyl-CoA synthase, beta subunit AFE_0426 370809 - 371153 + | hypothetical protein sucD 371150 - 372022 + | succinyl-CoA synthetase, alpha subunit TERM 300 373220 - 373259 + G 75 -7.7 -4.15565 | opp_overlap 373217, overlap 373253 ACAAGAGCGAAATCG CCGTCGGCTACGCAACC CTGTAT GGTGACATGGCCGGCGG TTTTGCGGTCATCAA nadE 372022 - 373671 + | glutamine-dependent NAD+ synthetase glnB-2 373668 - 374006 + | nitrogen regulatory protein P-II 1 AFE_0430 374795 - 374040 - | competence lipoprotein ComL, putative TERM 301 374392 - 374409 + g 79 -9.1 -4.25104 | AGGGTGCTGAAGGCC TCCTCGG CGGG CCGGGGA TTTTCCTGCGCGCCC rluD 374824 - 375783 + | ribosomal large subunit pseudouridine synthase D TERM 302 376096 - 376148 + G 95 -11.3 -4.56775 | overlap 376097 GCTGGCGGTGCTCAC GGCCGA-TTGCCTGCCGGTCCTGGC CTGCA GCCGGGA-TGGCCGGCAGGTCGGCG TTTTTCACGCCGGCT TERM 303 376097 - 376147 + G 86 -14.8 -3.33744 | overlap 376096 CTGGCGGTGCTCACG GCCGA-TTGCCTGCCGGTCCTGGC CTGCA GCCGGGA-TGGCCGGCAGGTCGGC GTTTTTCACGCCGGC TERM 304 376274 - 376296 + G 71 -5.5 -4.36914 | gap 1, overlap 376276 CCCGAGCATTTCGAG GTCGGTCCGG AAGT CCGGG-CGGC TTTTCTGGCGGCGGA TERM 305 376440 - 376455 + G 70 -3.2 -4.68512 | gap 1, overlap 376441 376441 GTGATCAGTGTACGG TG-GCGG ACC CCGCGCG TTATTTTTCTTATCG AFE_0432 375800 - 376525 + | conserved hypothetical protein TIGR00726 AFE_0433 376527 - 377075 + | dioxygenase, ARD/ARD' family ccbL2 377072 - 378244 + | ribulose bisphosphate carboxylase, large subunit 2 AFE_0435 378244 - 378897 + | HAD-superfamily hydrolase, subfamily IB TERM 306 378915 - 378930 + G 72 -2.4 -4.82901 | overlap 378916 378917 CGCGCACCCATCTCG CTGCGG CGGC CCGCGA TTTTTATGCGCGGGG AFE_0436 378887 - 379507 + | aldolase, class II AFE_0437 379509 - 380030 + | ACT domain protein def-1 380030 - 380533 + | polypeptide deformylase AFE_0439 382193 - 380607 - | amino acid permease family protein TERM 307 381263 - 381213 - G 78 -10.8 -3.9122 | overlap 381210 381214 GATCCGGGTAAAGAA GCTGGGGCCTGCCCCGACTTCGCC ATT GGCGACCACGGCGCGGGCCGCAGA TGTGGCATATACCAG TERM 308 381262 - 381214 - G 79 -14.3 -2.94411 | overlap 381210 381213 ATCCGGGTAAAGAAG CTGGGGCCTGCCCCGACTTCGCC ATT GGCGACCACGGCGCGGGCCGCAG ATGTGGCATATACCA TERM 309 382058 - 382037 - G 75 -2.3 -4.99043 | gap 1 GGCCGAGAAACAAAA TGG-TGATGG CGC CAATCAGCCA TGAATAAATACTGAG AFE_0440 382294 - 382178 - | hypothetical protein rfbB 383496 - 382357 - | dTDP-glucose 4,6-dehydratase TERM 310 382947 - 382978 + g 74 -12.2 -3.14564 | overlap 382951 GCCCGTAGGTGTGCC GATAGGCGCGGACC AGAT GGTCCGCTCCTGCC TTGCTGGCGGCGTAG TERM 311 382951 - 382974 + g 72 -13.8 -2.56596 | overlap 382947 GTAGGTGTGCCGATA GGCGCGGACC AGAT GGTCCGCTCC TGCCTTGCTGGCGGC rfbD 384385 - 383516 - | dTDP-4-dehydrorhamnose reductase TERM 312 384045 - 384016 - G 91 -13.5 -3.96148 | gap 1 TGCTGGCACCATAAA CGCCAAGGGGCGCC AGG GGCGCCTCC-GGCG GGTACGGCGTGGCCT AFE_0443 384921 - 384415 - | hypothetical protein AFE_0444 385253 - 384921 - | hypothetical protein galU 386214 - 385318 - | UTP-glucose-1-phosphate uridylyltransferase TERM 313 386316 - 386355 + r 86 -10.7 -4.09864 | gap 1, opp_overlap 386287, overlap 386343 CGGTTCCGGATGACG GCCTGCCGCCGG-TCTGG CTGAT TCAGAGCCGCCGCCAGGC TTTTCGCGGATGGCT AFE_0446 386987 - 386292 - | hypothetical protein AFE_0447 388445 - 387060 - | sigma-54 dependent DNA-binding response regulator TERM 314 387287 - 387311 + g 78 -6.4 -4.65895 | gap 1, overlap 387284 GGCGGCCGTTGTCAG GGATGGCGTCG GCGG CGAC-CCAGCC TTTTTCGGTGACGGC TERM 315 387985 - 387941 - G 70 -4.8 -4.54727 | opp_overlap 387976, overlap 387936 387966 CTCCGGAAAGGAAAA CGCTGGCTTTCGAGTTGGCA ACGCA CGCCAGCTCATCCACCAGCG CCGCCATGGCGGGGC AFE_0448 388953 - 388447 - | lipoprotein, putative AFE_0449 390437 - 388953 - | sensor histidine kinase recN 392276 - 390600 - | DNA repair protein RecN TERM 316 391616 - 391650 + g 75 -7.6 -4.20696 | CTTCCCGCAACTTTT CCACGGCGCCGAGGCG CTG CTCTTCGGCGCGCAGG TTTTCCCATTCATCG TERM 317 391771 - 391813 + g 76 -14.9 -2.63596 | gap 1 GCACAGCGCTGGGCG GCCTG-GCGCCATTGCCGAT AGCG GTCGGCAACGGCGCTCAGGG TGGTCTCCAATCCGG ppnK 393163 - 392276 - | ATP-NAD kinase TERM 318 393024 - 392998 - G 78 -10 -3.90112 | opp_overlap 392987, overlap 392999 393001 CTTCCGCGAAGGAAA GCAGCGGCAGCC CCA GGCTGTCGCCGA TATCCGCAGCACTTT TERM 319 393023 - 392999 - G 75 -13.5 -2.93853 | opp_overlap 392987, overlap 392998 393001 TTCCGCGAAGGAAAG CAGCGGCAGCC CCA GGCTGTCGCCG ATATCCGCAGCACTT TERM 320 393021 - 393001 - G 72 -12.5 -3.02166 | opp_overlap 392987, overlap 392999 392998 CCGCGAAGGAAAGCA GCGGCAGCC CCA GGCTGTCGC CGATATCCGCAGCAC TERM 321 393105 - 393081 - G 83 -4.9 -5.14563 | CGCGCCAGCAAAAAA TCCCGCAGTTG TCG CAACCCAGGGA GAACCGAGGGATCAT TERM 322 393200 - 393211 + r 75 -5.8 -4.56597 | ACAGCTTGCGCCAAG TGGC TGCG GCCA TTTTTGCACGGGCCG AFE_0452 393968 - 393243 - | transcriptional activator, putative, Baf family TERM 323 393752 - 393726 - G 77 -3.5 -5.00616 | GGCGCGGCGAAAAAA GCCGGGGTCGG GTTCG CGGACCTCTGC CGTGGCCAAGGCTTC birA 394870 - 393965 - | birA bifunctional protein TERM 324 394197 - 394155 - G 76 -10.4 -3.74251 | opp_overlap 394165, overlap 394179 CACAGGGGCAGGAAA GGCGTGAAACCCTCGTCCGC AAA GCGCGCGAAGTCTTCCCGCC AGTGGCGGAGAATGG proA 396143 - 394887 - | gamma-glutamyl phosphate reductase TERM 325 396040 - 396076 + g 90 -14.3 -3.53091 | opp_overlap 396032 396031, overlap 396033 396039 AAAAATTCCGCCATG GCGCGCAGGGCGCTGTC TTT GGCGGCGCTGTCCGCGC TTTGCAACCGCCGCT TERM 326 396223 - 396246 + G 79 -13.1 -3.49771 | overlap 396221 GCCGGGAAACGGCAG CCCGCGTGG CCTAAC CCGCGCGGG TATTGTTGGTATTGT AFE_0456 396206 - 396340 + | hypothetical protein AFE_0455 397494 - 396310 - | hypothetical protein TERM 327 396680 - 396666 - G 70 -3.4 -4.71828 | overlap 396667 AGCCGATGAATAAAA CGGGTC GCC GCCCCA GTTTGTCGGCCAGTC holA 398547 - 397555 - | DNA polymerase III, delta subunit AFE_0458 399067 - 398549 - | rare lipoprotein B, putative leuS 401529 - 399064 - | leucyl-tRNA synthetase wrbA 401786 - 402388 + | trp repressor binding protein AFE_0461 402405 - 403046 + | YceI-like family protein AFE_0462 403117 - 403908 + | d-alanyl-d-alanine dipeptidase, putative TERM 328 404499 - 404509 + G 74 -5.4 -4.56597 | CGGCGGTATCTGGGC GGAT GAA ATCC TTTTTCAGGCCCGCC AFE_0463 403957 - 404760 + | formamidopyrimidine-DNA glycosylase, putative AFE_0464 404769 - 405281 + | hypothetical protein TERM 329 405501 - 405519 + G 78 -5.2 -4.72986 | overlap 405503 GACCCTGGCGGGCGC GGGCACCA ACG TGGTGCTG TTTTTCGTCAAGCTG TERM 330 405503 - 405517 + G 78 -10 -3.98256 | overlap 405501 CCCTGGCGGGCGCGG GCACCA ACG TGGTGC TGTTTTTCGTCAAGC AFE_0465 405436 - 406611 + | cation efflux family protein TERM 331 406601 - 406619 + F 77 -4.4 -4.87626 | overlap 406602 GGTTCTTGTCATCCG GCGCCCCA TAA TGGTGCGA TTTTTGATGTTGCAC TERM 332 406831 - 406811 - g 72 -2.6 -4.7497 | TTGATTCAGGAAAAA GACATCAA GTTCG TTGATTTC CGCTTTACCGATACC TERM 333 407952 - 407931 - g 72 -2.9 -4.79352 | overlap 407935 GTATCCAGAACAAAA TCCATCCCG GCGA CGCCATGGA CAAGAATCTTTACGA glnA 406766 - 408181 + | glutamine synthetase, type I TERM 334 408227 - 408247 + F 100 -13.3 -5.24129 | overlap 408216 408214 TCCCCGGCGCCATCA GCCCCGTGT TGT ATACGGGGC TTTTTTGTGGCCGCC AFE_0467 408385 - 408897 + | hypothetical protein surE 408996 - 409748 + | acid phosphatase SurE TERM 335 409847 - 409873 + GF 80 -10.8 -3.85698 | opp_overlap 409855 GAGCGGGTGCTGGAC GCGATGAACCGG GTT CCGCGTCATCGC TTTGTCGCCCAAGCG pcm-2 409730 - 410455 + | protein-L-isoaspartate O-methyltransferase rpoS 410427 - 411380 + | RNA polymerase sigma-38 factor AFE_0471 411777 - 411403 - | hypothetical protein AFE_0472 411872 - 413053 + | aminotransferase, class I/II metM 413065 - 414375 + | homoserine dehydrogenase thrC 414427 - 415557 + | threonine synthase TERM 336 415825 - 415868 + G 86 -13.8 -3.53224 | overlap 415827 415828 CGGGGCGTGCGGTGT TACAGCCTCTGCCGGGTCTG GATG CGGACTCGGCAGAGGCGCTC TTTGCGGCGGCGGTG TERM 337 415827 - 415866 + G 89 -16.4 -3.34398 | overlap 415825 415828 GGGCGTGCGGTGTTA CAGCCTCTGCCGGGTCTG GATG CGGACTCGGCAGAGGCGC TCTTTGCGGCGGCGG TERM 338 415828 - 415865 + G 95 -19.9 -2.60496 | overlap 415827 415825 GGCGTGCGGTGTTAC AGCCTCTGCCGGGTCTG GATG CGGACTCGGCAGAGGCG CTCTTTGCGGCGGCG AFE_0475 415557 - 416522 + | hypothetical protein TERM 339 416535 - 416584 + G 73 -9.9 -3.57462 | gap 1, overlap 416528 TAGATGGCTGCGGAA GCCGTGCGCATTGTCGAT-CGTCC TGT GGCTGCGGCGATATTGCGCGCGGC TTTGGAACTCGGATA TERM 340 417314 - 417302 - g 73 -9.1 -3.99374 | GTCCACCAATAACAA GGCGA TCA TCGCC CGCGGCCTGGCGATC recJ 416523 - 418340 + | single-stranded-DNA-specific exonuclease RecJ AFE_0477 418549 - 418779 + | virulence protein, putative TERM 341 418836 - 418855 + G 71 -5.6 -4.37886 | gap 1, opp_overlap 418835, overlap 418836 418837 ATTGCCAAACACCAT C-CGCCCGC CGT GCGGGAGCG TTTTGTACAACATGG TERM 342 418946 - 418933 - g 75 -2.4 -5.00616 | GGGGTGCGGAAAAAA GTCA GGCGCG TGAC AAAGCGTTGGCCAGC AFE_0478 418785 - 419189 + | virulence-associated protein, putative TERM 343 419494 - 419478 - g 75 -7.9 -4.16921 | opp_overlap 419491 GAACAACGCCGAAAA GGCCCAG GAA CTGGGTC GCGAGCGGTCTGCTC prfB 419322 - 420420 + | peptide chain release factor 2, programmed frameshift TERM 344 421563 - 421537 - g 70 -10.2 -3.53012 | overlap 421550 TGGGGCTGGGGCAAA CGTCTCATCGAA ATC TTCGAGAAGACG GTGGAAGGCCATCTC lysS 420457 - 421947 + | lysyl-tRNA synthetase TERM 345 422375 - 422344 - g 89 -10.2 -4.43815 | gap 1, opp_overlap 422370, overlap 422345 ACCAAGACATGAAAA TGGGCGAGT-TGCAG TCC CTGCAGACTCACCCC TGGAGTATCGTCCTC TERM 346 422374 - 422345 - g 78 -13.7 -3.25205 | gap 1, opp_overlap 422370, overlap 422344 CCAAGACATGAAAAT GGGCGAGT-TGCAG TCC CTGCAGACTCACCC CTGGAGTATCGTCCT TERM 347 422866 - 422895 + G 75 -2.8 -4.98255 | overlap 422867 422882 CCATCCTTCGCACCA TCGGCGTGACGC CACGCA GTATCATGCTGA TTTTTATGGTTCAGG lolC 421944 - 423188 + | lipoprotein releasing system transmembrane protein LolC lolD 423181 - 423876 + | lipoprotein releasing system, ATP-binding protein LolD TERM 348 423912 - 423879 - Tf 77 -7.9 -4.25104 | overlap 423880 CGCTGTGCACTAAAA CCGGCTGCGCTGCAG GCGA CGGCGCCGCAGCCGC CACAGTATCCAGAGT TERM 349 423911 - 423880 - Tf 72 -11.4 -3.14848 | overlap 423879 GCTGTGCACTAAAAC CGGCTGCGCTGCAG GCGA CGGCGCCGCAGCCG CCACAGTATCCAGAG AFE_0482 424433 - 423873 - | hypothetical protein TERM 350 424306 - 424288 - Gf 79 -7.4 -4.42653 | opp_overlap 424298 AGGCTACCGATAAAA GTGCCG ATCGCGG CGGCAC GGGCGACGTTATGGC TERM 351 425008 - 425021 + GH 71 -9.5 -3.55761 | overlap 424999 ACGGCTGCAGGATGC CCGGC TGTT GCCGG TTTCCCGCATGAATC TERM 352 425713 - 425733 + GH 100 -8.9 -5.44721 | overlap 425704 CGAGATGCTTGCGGT GCCCCTGGC CCT GCTAGGCGC TTTTTTTGCACTGCT TERM 353 425893 - 425911 + GH 90 -5.2 -5.24129 | GGCCTTGCTGGCGGC GGTGCTGG GGC TCGGCATC TTTTTTCTGCCGCCG TERM 354 425932 - 425949 + GH 71 -9.1 -3.73953 | TCTGCCGCCGGGCTG GCCAGGG CGCC TCCTGGC TTTGCTGGGCATGGT AFE_0484 424418 - 426628 + | DNA internalization-related competence protein ComEC/Rec2 AFE_0485 426721 - 427341 + | MotA/TolQ/ExbB proton channel family protein TERM 355 427693 - 427652 - g 78 -5.1 -4.82901 | gap 1, overlap 427654 GCGCGCGGACAAAAA TACGACGCA-GCAGTACGTC ATC GATGTACTGGACGCGGCGCA GGAAGCGGGCCTGAC AFE_0486 427338 - 427742 + | biopolymer transport protein, ExbD/TolR family TERM 356 427779 - 427792 + F 71 -9.5 -3.54475 | TCCTTACGCGTGGTG GCCGC ACTC GCGGC TTATATCATCAAAGG AFE_0487 427851 - 428432 + | hypothetical protein AFE_0488 428429 - 429574 + | hypothetical protein TERM 357 429771 - 429755 - g 80 -10.8 -4.11216 | GGGGCAGCGGCAAAA CGCCGC TGGTG GCGGCG CTGGCACGGCAACTC TERM 358 430194 - 430205 + G 89 -7.2 -5.08255 | CATCCCGGAGCGCAA CGGG CCAC CCCG TTTTCTTTTCCGCAT lpxK 429571 - 430569 + | tetraacyldisaccharide 4'-kinase AFE_0490 430569 - 430751 + | hypothetical protein TERM 359 431464 - 431498 + G 70 -4.1 -4.68994 | opp_overlap 431447 431448 GCCCGCCGCAGGTGT GGACACCGC-CGCGGAC CTT GACCGCGTGCGC-GACC TTTTTCCCTGATCAT kdsB 430748 - 431509 + | 3-deoxy-D-manno-octulosonate cytidylyltransferase ppa 431531 - 432052 + | inorganic pyrophosphatase AFE_0493 432117 - 432497 + | hypothetical protein TERM 360 433024 - 433039 + F 75 -6.2 -4.56775 | opp_overlap 433024 433023, overlap 433014 TTCCATCCTAAAAAT TTTAGG CTGT CCTAAA TTTTTAGGCAAGAGT AFE_0495 433554 - 433781 + | hypothetical protein TERM 361 433860 - 433802 - f 100 -22.2 -4.15044 | gap 4, overlap 433803 433831 TTGCCGCCCAACAAA CGCTTCGAGAGGGACGCTCAGCCAGCAAGC GAA GCTTGCTGGCTGAGCGTCCCTC---AAGC- TGCACGTTCGGTGCC TERM 362 433860 - 433803 - f 100 -28.2 -3.08812 | gap 3, overlap 433802 433831 TGCCGCCCAACAAAC GCTTCGAGAGGGACGCTCAGCCAGCAAGC GAA GCTTGCTGGCTGAGCGTCCCTC---AAGC TGCACGTTCGGTGCC TERM 363 434401 - 434377 - g 71 -6.4 -4.2349 | CTGGGAGATCCAAAA GACCCTGAAC TTTCC GCTCACGGTC TACGGGTTTGAGCGC AFE_0496 433901 - 434497 + | bacterial transferase hexapeptide repeat protein TERM 364 435636 - 435596 - f 100 -18.4 -3.61715 | gap 2 CATGCCGTCCAACAA CCGGTTGCAGCGGACGGCGC TGC GCGCTG-CCGCTG-AACCGG AGCGTTGGGCGTCAT AFE_0498 435706 - 436143 + | hypothetical protein TERM 365 436311 - 436327 + G 76 -7.3 -4.44797 | opp_overlap 436303 436311 GCATACACCAGGGAA TTGCTGG ACG TCAGCAA TTTTCATATTGATCA AFE_0499 436230 - 437363 + | hypothetical protein AFE_0500 437450 - 437863 + | hypothetical protein AFE_0501 437940 - 438293 + | hypothetical protein TERM 366 438308 - 438333 + F 84 -13.2 -3.06831 | ACCCTGCGCTCACGC GGGACGCGCC AAAAGC GGCGCGCCCC TTAGCTACACGTTAG AFE_0502 438369 - 438794 + | hypothetical protein AFE_0503 439305 - 439445 + | hypothetical protein AFE_0505 439534 - 440082 + | hypothetical protein AFE_0504 440242 - 440054 - | hypothetical protein AFE_0506 440216 - 441076 + | hypothetical protein TERM 367 441770 - 441783 + G 88 -2.3 -5.48054 | TGGGCTCATTGGCCA GCTCC TTAC GCAGC TTTTTTGCTTTTGCT AFE_0507 441199 - 442443 + | site-specific recombinase, phage integrase family AFE_0508 442440 - 443381 + | site-specific recombinase, phage integrase family AFE_0509 443374 - 444372 + | site-specific recombinase, phage integrase family TERM 368 444505 - 444452 - f 79 -11.1 -3.65425 | overlap 444463 444498 GCCACATATTTTAAA GCGCCACATAATGGTACTTATGTGG TCGG CCACATAAATACCAGAATGGGAAGC AGGAGTGCTTCTGGG TERM 369 444494 - 444463 - f 95 -15.4 -3.51161 | overlap 444452 TAAAGCGCCACATAA TGGTACTTATGTGG TCGG CCACATAAATACCA GAATGGGAAGCAGGA AFE_0510 444547 - 445074 + | transposase, degenerate TERM 370 445825 - 445799 - f 83 -12.3 -3.64703 | GGGTGCTCACCCAAA TGGCGGCCG AACTCCTGG CGGCCGCCA CCCAACGCCAACTGG AFE_0512 445928 - 446131 + | hypothetical protein TERM 371 446151 - 446187 + F 100 -10.8 -5.24129 | opp_overlap 446149 446151 CTGACCAATCCAAGA GCCATGCCGCCCCGTT CACAA AATCGGGCTGCGTGGC TTTTTTATGCCGCCG AFE_0513 446517 - 446723 + | hypothetical protein TERM 372 446805 - 446779 - g 71 -5.6 -4.31379 | overlap 446769 ACGAACCCAGCAAAA CCAGGCCATCCG TCC CGGCCCGCCGGG CGCCCACCAGACAAA AFE_0514 446705 - 446824 + | hypothetical protein AFE_0515 447712 - 447924 + | hypothetical protein AFE_0516 448267 - 448001 - | hypothetical protein AFE_0518 448643 - 449236 + | hypothetical protein AFE_0519 450778 - 449303 - | hypothetical protein clpA 453040 - 450782 - | ATP-dependent Clp protease, ATP-binding subunit ClpA TERM 373 451559 - 451586 + g 74 -6.8 -4.30576 | opp_overlap 451568 ACCCACGCCGGTCGG GCCGGAGAAGAG AAAA CTCCCCACCGGC TTTTCATGGTGGCGC TERM 374 451596 - 451617 + g 75 -7.9 -4.25104 | overlap 451606 ACCGGCTTTTCATGG TGGCGCAGG CCTG CCCGTGCCA TTTTGATGGCCGCGG TERM 375 452820 - 452845 + g 91 -14 -3.75153 | GGCTGGGTATTGACG GTGCCCGCCG GACCCA TGGCGGGCAC TTTGCGTTCCAGAAA TERM 376 452873 - 452930 + g 72 -11.9 -3.28712 | gap 1, opp_overlap 452883 AAACTGCCGTAGTTC CACAGACAG-ATGGGTGCGGTCGGCGCC ACA GGCGCTGAGCACATCCATACCGTCGGGG TTGTCCAGCAGGGCC TERM 377 452919 - 452883 - G 72 -12.9 -3.052 | opp_overlap 452873 AGTTCCACAGACAGA TGGGTGCGGTCGGCGCC ACA GGCGCTGAGCACATCCA TACCGTCGGGGTTGT AFE_0521 453388 - 453044 - | ATP-dependent Clp protease adaptor protein ClpS TERM 378 453505 - 453484 - R 100 -10.8 -5.75342 | opp_overlap 453484 GGCGGTGAAAAAAAA GCGCCGGG GAGATT CCCGACGC TTTTTGTTTGGGCGA TERM 379 453484 - 453505 + r 100 -9.3 -5.27335 | opp_overlap 453484 GGCGGTGAAAAAAAA GCGCCGGGG AGAT TCCCGACGC TTTTTGTTTGGGCGA AFE_0522 454305 - 453529 - | peptidyl-prolyl cis-trans isomerase, PPIC-type thiJ 454932 - 454321 - | 4-methyl-5(B-hydroxyethyl)-thiazole monophosphate biosynthesis enzyme ctpA 456518 - 455070 - | carboxy-terminal peptidase TERM 380 456292 - 456311 + g 89 -4.3 -5.24531 | overlap 456293 GCGCTGACCATGCCG TTGATGG CGCCAT CCATCAG TTTTTTGTCGGAAGT AFE_0525 458000 - 456582 - | M23/M37 peptidase domain protein TERM 381 456948 - 456919 - G 100 -18.7 -3.53012 | gap 1 CGGGGCGCGCCGAAA CGCG-CGGTAACCG GAC CGGTTACCGGCGCG GGGTAGCTGCCGCGC TERM 382 457145 - 457203 + g 72 -12.2 -3.11687 | gap 2, opp_overlap 457141, overlap 457172 457181 GGGCCAGATGATGTT -GC-GCGACAGCGGCCCGCTGCGCGGAG ATTGC CGCCGCGCGACGGGCCGCAGCAGCGGCC TTGCGTCGTGCTTCG TERM 383 457736 - 457755 + g 71 -6.4 -4.21812 | gap 1 GTGCCGAGTGTTGCT GCT-GCTGG ATT CCGGCCAGC TTCTTTTGCGTCGCA gpmI-2 459533 - 458004 - | 2,3-bisphosphoglycerate-independent phosphoglycerate mutase AFE_0527 462087 - 459601 - | glycogen/starch/alpha-glucan phosphorylase TERM 384 460723 - 460707 - G 78 -6.5 -4.59853 | opp_overlap 460706, overlap 460709 GGAAGTCGGCAAAAA GATCCTC ACA GAGGAGC CTGGTGTGCAGTGCC TERM 385 461887 - 461847 - G 80 -10.7 -4.06491 | gap 3, opp_overlap 461854 461878, overlap 461854 GGAACTCCAGAGAAA GATAAAAGGTGCGCCTGCCG CTTT CGGC-GGC-CACCTTTT-TC TGGGTGTTTTTCCAG TERM 386 461881 - 461854 - G 100 -9.9 -4.87328 | gap 2, opp_overlap 461854 461878, overlap 461847 CAGAGAAAGATAAAA GGTGCGCCTGCCG CTTT CGGC-GGC-CACC TTTTTCTGGGTGTTT TERM 387 461854 - 461881 + g 100 -9.9 -4.92363 | gap 2, opp_overlap 461847 461854, overlap 461878 CAGAGAAAGATAAAA GGTGCGCCTGCCG CTTT CGGC-GGC-CACC TTTTTCTGGGTGTTT AFE_0528 462232 - 462681 + | hypothetical protein AFE_0529 462715 - 463101 + | rhodanese-like domain protein AFE_0530 464055 - 463114 - | carbohydrate kinase, PfkB family TERM 388 464284 - 464295 + G 83 -2.2 -5.1675 | TACATCAACCTCTTT GGTG GGAA TACC TTTTTTGATGCCTCA AFE_0531 464176 - 464781 + | hypothetical protein metK 464925 - 466094 + | S-adenosylmethionine synthetase AFE_0533 466181 - 466276 + | hypothetical protein TERM 389 466576 - 466588 + G 73 -4.7 -4.65895 | overlap 466577 GCGGCCATCGCGGCG GCGGG CAT CCCGG TTTTTGCCTGGAAAG ahcY 466291 - 467688 + | adenosylhomocysteinase TERM 390 468246 - 468274 + G 80 -10.3 -4.09243 | GGTATTGAAGTGCCG TTGGTGGTCGGCG TCA TGCCCATCACCAA TTTTGAACAGATCTC TERM 391 468466 - 468499 + G 85 -8.7 -4.59511 | overlap 468496 ACACCCTGAATCAGG CCGAGGCGACGGCGG CGAT CTGGCGTAACCTCGG TTTTTAGCCGATATT metF 467688 - 468506 + | 5,10-methylenetetrahydrofolate reductase TERM 392 468790 - 468812 + GF 72 -12 -2.71712 | overlap 468789 CATTGCCAAGGCTGC GGCCGATGGT AAA ACCATCAGCC ATTTCGGCCCGGAAG cbbP 468611 - 469483 + | phosphoribulokinase TERM 393 469509 - 469548 + GT 100 -18.6 -2.57344 | opp_overlap 469512 469515, overlap 469515 469543 TTCCTGGCTTTTGAA CAACGATCCCGTGGTGGC TGTA GCCGCCGCGGGATTGCTG GTTCTGGCAGCGATA TERM 394 469545 - 469512 - gT 82 -12.3 -3.61398 | opp_overlap 469509 469515 469543, overlap 469515 CTGGCTTTTGAACAA CGATCCCGTGGTGGC TGTA GCCGCCGCGGGATTG CTGGTTCTGGCAGCG TERM 395 469542 - 469515 - gT 79 -12.6 -2.93073 | opp_overlap 469515 469509, overlap 469512 GCTTTTGAACAACGA TCCCGTGGTGGC TGTA GCCGCCGCGGGA TTGCTGGTTCTGGCA TERM 396 469515 - 469542 + GT 100 -17 -3.30474 | opp_overlap 469512 469515, overlap 469509 GCTTTTGAACAACGA TCCCGTGGTGGC TGTA GCCGCCGCGGGA TTGCTGGTTCTGGCA TERM 397 470071 - 470082 + GT 80 -3.6 -5.08169 | GCCCTTCGCTACATG TCGC TACA GCGG TTTTTTCGGGTATCT AFE_0537 469416 - 470297 + | PAP2 family protein AFE_0538 471849 - 470323 - | hypothetical protein TERM 398 471422 - 471396 - G 80 -15.1 -2.98823 | CCGGCGGTACATACA CCACGCCGGGC AGGAA GCGCGGCGTGG CCTTACCGCCGAGAC AFE_0539 473558 - 471885 - | sulfate adenylyltransferase, putative/adenylylsulfate kinase AFE_0540 474138 - 473569 - | adenine phosphoribosyltransferase, putative AFE_0541 474197 - 474328 + | hypothetical protein TERM 399 474347 - 474366 + T 80 -10.6 -3.87815 | opp_overlap 474348, overlap 474348 GGAAGACACAAAAAA ACCGGCCC CGAA GGGCCGGC TTTCTAACGCTACAG TERM 400 474348 - 474365 + T 86 -14.1 -2.92475 | opp_overlap 474348, overlap 474347 GAAGACACAAAAAAA CCGGCCC CGAA GGGCCGG CTTTCTAACGCTACA TERM 401 474365 - 474348 - T 100 -14.1 -5.80248 | opp_overlap 474348 474347 GAAGACACAAAAAAA CCGGCCC CGAA GGGCCGG CTTTCTAACGCTACA groEL 476054 - 474399 - | chaperonin, 60 kDa TERM 402 475049 - 475068 + g 70 -4.2 -4.50058 | overlap 475049 CGCTCTGCTGACCGG CGCCATCG ATCA TGGTGGTG TTTTCCTTGTCGATG groES 476391 - 476101 - | chaperonin, 10 kDa AFE_0544 477349 - 476519 - | hypothetical protein TERM 403 477322 - 477304 - G 100 -8.8 -5.08824 | GCTCCATGTAAAAAA GGGCAACC CGG AGTCGCCC TAAAACCACAAAGGA TERM 404 477381 - 477349 - G 71 -8.3 -4.00842 | opp_overlap 477348 AGGAGAAAAGAAACA TGCGCTCGCAACCAG CTA CTGGCTGCGGGTGGA ATATTAGCAAAAGGT TERM 405 477464 - 477442 - H 100 -9.1 -4.96501 | gap 1 TCGGACAAAAAGAAA GGGCGGAACC AAAC GGC-CCGCCC AAAACCACCAAAGGA TERM 406 478377 - 478416 + G 73 -9.8 -3.66378 | gap 1, opp_overlap 478379 CTGATCGTCGGTAAG GAGGCAGGGCGCG-GCCCG CAA CGGTCACGCGCCCTGGGGC TTTCCGTCGCCTATG TERM 407 478513 - 478531 + G 76 -6.6 -4.46617 | AGGCGGCCTTCCAGA GTCCCTGG GTG CTGGGGGC TTTTGCCTTTGTTTT TERM 408 478698 - 478722 + G 72 -11.3 -3.33151 | overlap 478697 478692 ATCGGGCCCTGCGTG GCCGCCCCCCT GGC AGGCGGGCTGC TCTTCATTTCCCAGA TERM 409 478727 - 478746 + G 93 -8.6 -5.14163 | overlap 478692 AGGCGGGCTGCTCTT CATTTCCC AGAC GGGAGATG TTTTTCTTGGTGGAT dsbD 477663 - 479513 + | thiol:disulfide interchange protein DsbD AFE_0546 479745 - 479533 - | hypothetical protein TERM 410 479655 - 479634 - G 71 -7.2 -4.26076 | CGATTTTGAGGAAAA CGCGGGGA TGCCCG TCCCAGCG GCTCATGCCGGGCGT ilvE 480673 - 479750 - | branched-chain amino acid aminotransferase TERM 411 480669 - 480651 - G 73 -4.4 -4.6468 | TCAAACCAGATAAAA CCGTCGCG TTC CGCCATGG ACATCGTCACATCTC glnE 483550 - 480686 - | glutamate-ammonia-ligase adenylyltransferase TERM 412 482563 - 482575 + g 89 -4.7 -5.2422 | overlap 482564 ACTCGATTTCGCGGA TGCCG CCC CGGCC TTTTTTGATGTCGTT TERM 413 485628 - 485651 + G 75 -2.3 -5.00616 | overlap 485632 CACGGTGAATACGCC GGTCGCGCT CGAAAA AGTGCTGCC TTTTTTGCGGGCAAC TERM 414 486441 - 486454 + G 74 -5.9 -4.57341 | CTTCGACCTGCATTG GCGGC ACCT GCTGC TTTTTGAACAGGATT AFE_0549 483763 - 487395 + | hypothetical protein AFE_0550 488691 - 487465 - | ISAfe3, transposase TERM 415 489200 - 489190 - g 85 -6.8 -4.7373 | GGACGCGATGAAAAA GCCA AGC TGGC CATCATGGAGAGGGA TERM 416 489724 - 489780 + G 74 -5.6 -4.57569 | overlap 489725 GACCCCTGGGGTCAG GTCCTGGCCCGTCTGGATCAGGGCGA GGGGG TCGCGCTGGCCCAGGCGGACGGAGAA TTTTTGCAGCGCTGC AFE_0551 489001 - 489849 + | hydrolase, carbon-nitrogen family TERM 417 490307 - 490319 + G 93 -7.7 -5.0133 | CTATATCATCGCCGC GGTCT CCC AGACC TTTTTTACCCAGATG TERM 418 491060 - 491074 + G 90 -4.2 -5.41143 | overlap 491055 491051 CAACTGGCACGCGGT CGTCGA CCG TCTACG TTTTTTTGAACAGTC TERM 419 491294 - 491308 + G 79 -9.2 -4.25104 | ACTGGTACGCGCTCT GGCCGG TAT CTGGCC TTTTGGTGAGGGGGA AFE_0552 490047 - 491810 + | ABC transporter, permease/ATP-binding protein AFE_0553 491832 - 492407 + | hypothetical protein AFE_0554 492649 - 492431 - | hypothetical protein lspA 493357 - 492899 - | signal peptidase II ileS 496170 - 493357 - | isoleucyl-tRNA synthetase TERM 420 493601 - 493588 - G 74 -3.1 -4.77036 | gap 1 GCTCAGCAGGAAAAA GCGCAG CTC CT-CGC CGAGTGGTGCAAGAA ribF 497105 - 496173 - | riboflavin biosynthesis protein RibF TERM 421 496948 - 496938 - G 70 -3.2 -4.58395 | CGCAGCTCGGAAAAA CTCC CGG GGAA GGGGCTCGAAGGTGA TERM 422 497178 - 497192 + r 78 -7 -4.59944 | overlap 497177 GATTTCCCTAGGTTG GGGCAG CGC CCGCCC TTTCTTTCTCATCAT AFE_0558 497590 - 497204 - | hypothetical protein mviN 499202 - 497649 - | integral membrane protein MviN TERM 423 499449 - 499426 - g 73 -10.2 -3.57144 | overlap 499427 GCGGTGACCTTGAAA CCCGGCAGCG TCGC CGCTGGCGGA CAGGTCGTCGACCAT AFE_0561 499216 - 499575 + | hypothetical protein AFE_0560 499896 - 499528 - | hypothetical protein TERM 424 499940 - 499973 + H 89 -3 -5.50499 | gap 1 CCCTGGCCCGCGAAC CCGATGCGTC-GATC ACCCC GGTCAGGCGCCCCGG TTTTTTTCGATATAG AFE_0562 500146 - 501009 + | yicC family protein gmk 501016 - 501654 + | guanylate kinase rpoZ 501678 - 501953 + | DNA-directed RNA polymerase, omega subunit spoT 502012 - 504216 + | guanosine-3,5-bis(diphosphate) 3-pyrophosphohydrolase AFE_0566 504232 - 504621 + | endoribonuclease L-PSP, putative AFE_0567 504623 - 504838 + | hypothetical protein recG 504840 - 506894 + | ATP-dependent DNA helicase RecG AFE_0569 506987 - 507832 + | ErfK/YbiS/YcfS/YnhG family hemG 509184 - 507844 - | protoporphyrinogen oxidase TERM 425 507949 - 507896 - G 70 -10.7 -3.48276 | overlap 507897 GCCTGTTCGATACAA TCTCCCAGGGCGACGCCTCCCTGCC AGTT GGCACGGAAGTGCAGCCCGGGGTGC CCGGCACTCAGGGTG TERM 426 507948 - 507897 - G 72 -14.2 -2.68823 | overlap 507896 CCTGTTCGATACAAT CTCCCAGGGCGACGCCTCCCTGCC AGTT GGCACGGAAGTGCAGCCCGGGGTG CCCGGCACTCAGGGT AFE_0571 510232 - 509189 - | hypothetical protein AFE_0572 510541 - 511335 + | hypothetical protein TERM 427 511363 - 511342 - g 71 -7.1 -4.28361 | overlap 511344 GGAAGGTGACGAAAA GACCGGCGG GATG CCGCCGGAA GCCGGGAAAACTCTG TERM 428 511361 - 511344 - g 91 -14.1 -3.74158 | overlap 511342 AAGGTGACGAAAAGA CCGGCGG GATG CCGCCGG AAGCCGGGAAAACTC AFE_0573 511316 - 511924 + | conserved hypothetical protein TIGR00296 AFE_0574 511917 - 513002 + | radical SAM domain protein AFE_0575 514344 - 513010 - | type I secretion outer membrane protein, TolC family pabB 514510 - 515898 + | para-aminobenzoate synthase, component I TERM 429 516711 - 516725 + G 77 -3.4 -4.87786 | CGGTCTGGGTGGTCT GGCCGG TGA TCAGCC TTTTTCTGGCCTTAC AFE_0577 515873 - 516952 + | hypothetical protein TERM 430 517050 - 517076 + F 71 -8 -3.80855 | opp_overlap 517050 GCACCAGATGAAACA GGCGCTTAGAGT AAT GTTCTAGGTGCC TTCGTTTTTCCGGGC AFE_0579 517171 - 517464 + | hypothetical protein AFE_0580 517499 - 517630 + | hypothetical protein AFE_0581 517630 - 517812 + | hypothetical protein AFE_0582 518060 - 517863 - | hypothetical protein AFE_0583 518284 - 518054 - | hypothetical protein TERM 431 518960 - 518987 + H 70 -6.9 -4.07568 | opp_overlap 518961, overlap 518961 CCGGTATTCTGCAAC ATCCCTGGCGG ATAGTG CAGCCAGGGAC TTTTCCCCCAGGCCA AFE_0585 519125 - 519379 + | hypothetical protein AFE_0587 520530 - 519523 - | sodium/calcium exchanger TERM 432 519608 - 519575 - G 85 -5.9 -5.10933 | gap 1, overlap 519580 CCATTGAAAAGAAAA TGATAGGGCCGCAGGG TAA CGCCGCGGCGC-ACCA GAAGATAAGTGTATC TERM 433 520802 - 520817 + G 91 -6 -5.41143 | overlap 520801 GGACTGAGTGCCATC GCCCCC TTGC GGGTGC TTTTTTTGCCAAGTC AFE_0588 520643 - 521266 + | hypothetical protein AFE_0589 521368 - 523221 + | ATP-dependent RNA helicase, DEAD/DEAH box family TERM 434 523260 - 523237 - T 78 -2.2 -5.19275 | ACGCACAAAAGAAAA CCGGAATCGC GAGC GCCAGACCGG TAAAGCTACTTTTCC AFE_0590 523522 - 523319 - | cold-shock protein priA 525788 - 523626 - | primosomal protein N` TERM 435 523913 - 523940 + g 89 -15.6 -3.34344 | opp_overlap 523917, overlap 523917 GTAGGGTGAGAGCGG CAAAGGGCGGCA ACCC TGCCGCCCTTCG TTCATTCAGGAGTGC TERM 436 523936 - 523917 - G 90 -15 -3.59262 | opp_overlap 523913 523917 GGTGAGAGCGGCAAA GGGCGGCA ACCC TGCCGCCC TTCGTTCATTCAGGA TERM 437 523917 - 523936 + g 90 -15 -3.45366 | opp_overlap 523917, overlap 523913 GGTGAGAGCGGCAAA GGGCGGCA ACCC TGCCGCCC TTCGTTCATTCAGGA TERM 438 524588 - 524619 + g 84 -11.6 -4.07687 | opp_overlap 524552 524594 TTTCCTTACACGCCG TCAACAGGGTGGTG GAAA TGCCACCCTGTAGA TTTTCGCGGCGCAGT TERM 439 525750 - 525732 - G 74 -6.6 -4.34402 | CGGGGCATAGGAAAA GATGCGGC GAA GCGGCACC ATCACGGCGATCTGA ubiA 526958 - 526056 - | 4-hydroxybenzoate polyprenyl transferase AFE_0593 527470 - 526958 - | chorismate lyase family protein TERM 440 527351 - 527365 + g 89 -11.4 -4.18018 | ATCCAGCAGCAGCGC CCGCAC GGT GTGCGG TTTTCCATAAGCCCG AFE_0594 528163 - 527561 - | phosphatidylethanolamine N-methyltransferase, putative TERM 441 528205 - 528192 - H 73 -5.2 -4.66609 | opp_overlap 528204 CAGTGGAGGCAAAAA CGCG GGCTAG CGCG TCGCCGAATGAACGG TERM 442 528222 - 528265 + H 70 -6.9 -4.17657 | gap 2, overlap 528204 528262 CGCCGAATGAACGGC GCGTATTGTAGCATGGCGCTA TGGA TGGCGTCATGCTG-AA-GCGC TTTTGCGCTATACTG AFE_0595 528323 - 528706 + | lipoprotein, putative TERM 443 528707 - 528727 + F 84 -12.5 -3.37796 | overlap 528718 CTGGGTCTGGGGTGA GGGGTGGCC CTG GGCTGCCCC TTGTCAATCCTGCGG miaB 528790 - 530145 + | tRNA-i(6)A37 modification enzyme MiaB AFE_0597 530111 - 531133 + | PhoH-like protein AFE_0598 531151 - 531627 + | conserved hypothetical protein TIGR00043 AFE_0599 531620 - 532495 + | magnesium and cobalt efflux protein, putative TERM 444 532529 - 532545 + G 73 -10.1 -3.66908 | AACCGTCCTTTCCTC TGCGGCT TCT GGCCGCA TTAATTTTGGGCGCA TERM 445 532599 - 532615 + G 74 -3.5 -4.82333 | overlap 532588 CTTCGCCTGGTGGCC GCTGGCC ATA GCCCTGC TTTTTGGCTTGTTCT TERM 446 532810 - 532839 + G 83 -2.8 -5.24531 | gap 2, overlap 532804 532826 TGTTGCGCCGTCTAC GCGG--CGTTGGCC TTAT GGCTGGCGGGCCGC TTTTTTGTCGGGAAT TERM 447 533545 - 533561 + G 76 -6.5 -4.45168 | overlap 533546 CTGGTACATCATTTT TTGCCGG GGC TCGGCAG TTTCTCTTTTGGAGA TERM 448 533670 - 533682 + G 73 -4.7 -4.70515 | overlap 533670 GCGCAAGGGCGTCAG GGAGG GTG CCACC TTTCTTTTGAATATC cutE 532507 - 534012 + | apolipoprotein N-acyltransferase pmbA 535327 - 533981 - | pmbA protein TERM 449 536013 - 535994 - g 72 -13.6 -2.6381 | overlap 535984 535983 ACAAGCCGGAGACCA TGCCTGCG GTGG CGCAGGCA GTTGCGGCGAGCCTG TERM 450 536230 - 536210 - g 71 -5.3 -4.34402 | overlap 536211 GTTGCGACATCAAAA CGCCGTGGA AAC TCCAGGCCG CCATCATGAATGGTA AFE_0602 535621 - 536505 + | cation ABC transporter, periplasmic cation-binding protein, putative AFE_0603 536519 - 537343 + | cation ABC transporter, ATP-binding protein, putative AFE_0604 537363 - 538253 + | cation ABC transporter, permease protein, putative TERM 451 538311 - 538328 + G 85 -3.3 -5.32882 | ACCGCCATTGCTTTT GTCGCTG CTTT CATCGGC TTTTTTGTGGTGGTA TERM 452 538576 - 538586 + G 71 -6.8 -4.23723 | overlap 538581 TGACCAGTGCGTATG CACC GGC GGTG TTTTCCCTGCTCTTC AFE_0605 538257 - 539066 + | cation ABC transporter, permease protein, putative AFE_0606 540368 - 539103 - | hypothetical protein TERM 453 539703 - 539684 - GT 71 -11.4 -2.87344 | overlap 539686 TATCCCCCGGATAGA GACGACGG ATCG CCGTCGCC AGCCAATGGCCATTC AFE_0607 541134 - 540304 - | hypothetical protein AFE_0608 541418 - 541242 - | hypothetical protein AFE_0609 542428 - 541415 - | NAD-dependent epimerase/dehydratase family protein AFE_0610 542676 - 542425 - | hypothetical protein AFE_0611 544058 - 542742 - | hypothetical protein TERM 454 543381 - 543362 - GR 71 -11.4 -2.87344 | overlap 543364 TATCCCCCGGATAGA GACGACGG ATCG CCGTCGCC AGCCAATGGCCATTC AFE_0612 544824 - 543982 - | hypothetical protein AFE_0613 545614 - 545408 - | hypothetical protein TERM 455 545599 - 545560 - G 72 -14.2 -2.53015 | gap 1, overlap 545548 ACAGCCGGGAATGGA GCGATACCGCCGCCTGCCC GGT GCGCAGGCGGCGGG-TCCC ATGCCCACTAGCCAA AFE_0614 545720 - 546949 + | hypothetical protein TERM 456 547460 - 547484 + G 89 -12.9 -4.00124 | CCCCCCAGGAGGCCA TGCGCCGAC GGATCAA GTCGGCGCA TTTCGTTCTCACCTG AFE_0615 546946 - 548208 + | glycosyl transferase, group 1 AFE_0616 548205 - 549449 + | glycosyltransferase, group 1 AFE_0617 549449 - 551278 + | ABC transporter, permease/ATP-binding protein AFE_0618 551275 - 552579 + | UDP-glucose/GDP-mannose dehydrogenase family protein AFE_0619 552620 - 553462 + | hypothetical protein TERM 457 553821 - 553803 - g 76 -7.3 -4.56597 | overlap 553805 GCGCCGCTGGAAAAA GGCCCCC GACGA GGTGGCC CCTCCGGGTGGGGAG AFE_0621 553474 - 554142 + | phosphoglycerate mutase family protein AFE_0620 554904 - 554119 - | hypothetical protein TERM 458 554297 - 554241 - G 73 -4.4 -4.67011 | gap 2, overlap 554264 554293 AATTCCAGGCAAAAA CGATGTCTGCCGGACCCGCATAACCGGG CTG CTCGGAT-T-CGGAACCAGAAAACATCG CTGTAAGGATGTTGC AFE_0622 555882 - 555070 - | hypothetical protein TERM 459 555454 - 555443 - G 71 -5.8 -4.40358 | opp_overlap 555448 ATCCAGCCGACAAAA TGCG CCGC CGCA GCCGTGTTCCAGGCG AFE_0623 556014 - 556778 + | methyltransferase, UbiE/COQ5 family TERM 460 556969 - 556937 - gf 75 -12.7 -2.56596 | gap 1, opp_overlap 556940, overlap 556933 TGTTGCACGAAGTGA CCAGCCCGCAGGCC TTTTCC GGGCTGCGGGC-GG CGGGCCGCAAGGCGT TERM 461 558018 - 558029 + GF 74 -7.2 -4.18018 | overlap 558009 CCTGGACCGCATCTT CCGG GATG CCGG TTTTGAATGGCGGGA TERM 462 558179 - 558206 + GF 83 -8.4 -4.45083 | gap 1, overlap 558170 TGGTGAGCCCCGCCA TGGCC-GCAGCGG CTG CCATTGCCGGCCA TTTTGTGGATGTGCG leuC 556828 - 558240 + | 3-isopropylmalate dehydratase, large subunit AFE_0625 558209 - 558388 + | hypothetical protein leuD 558388 - 559011 + | 3-isopropylmalate dehydratase, small subunit AFE_0627 559032 - 559346 + | hypothetical protein pdxH 560019 - 559363 - | pyridoxamine 5'-phosphate oxidase rpiA 560710 - 560051 - | ribose 5-phosphate isomerase A TERM 463 560668 - 560685 + g 88 -2.5 -5.47821 | opp_overlap 560663, overlap 560669 560670 GCTGGATATAGCGCA GAGCGGC TTCG GCCGCCA TTTTTTTGAGTGCGT AFE_0630 561452 - 560700 - | DJ-1/PfpI family protein TERM 464 561501 - 561487 - H 70 -3.4 -4.69053 | opp_overlap 561497 561498, overlap 561488 CAGCAGGCAAGAAAA GGGCGA CTT CCGCCG GGGCGTCCGCTGTTT TERM 465 561811 - 561829 + H 77 -8.2 -4.15006 | opp_overlap 561811 GCGAACATTAACCAA CCATTTGT TCC ACAGATGG TTTTCAGATGCGTCT TERM 466 562308 - 562334 + G 78 -13.9 -3.14931 | opp_overlap 562333, overlap 562300 GGCTGCGCGGGTAAC CCCTTTTGGAT ATTCG ATCCAAAAGGG TTGATGGCCGATACC cyoA 562218 - 563183 + | cytochrome o ubiquinol oxidase, subunit II TERM 467 564405 - 564421 + G 71 -5.7 -4.32034 | CAACGCCGCCATGCT GTGGGCC ATC GGCGCGC TTTTCCTGCTGCTGG cyoB 563236 - 565353 + | cytochrome o ubiquinol oxidase, subunit I TERM 468 565873 - 565885 + G 70 -3.4 -4.68103 | ATCCTGACCCAGGTA CATG CCGCC CATG TTTTCTTCGGGTTGA cyoC 565420 - 566055 + | cytochrome o ubiquinol oxidase, subunit III cyoD 566052 - 566408 + | cytochrome o ubiquinol oxidase, subunit IV cyoE-1 566437 - 567381 + | protoheme IX farnesyltransferase TERM 469 568061 - 568071 + G 76 -6.8 -4.49981 | ATCCTGCAGATGGTG CTGG GGG CCAG TTTTGTGGTGCTCTC AFE_0637 567401 - 568603 + | major facilitator family transporter AFE_0636 569430 - 568597 - | undecaprenol kinase, putative greA 569918 - 569442 - | transcription elongation factor GreA carB 573154 - 569915 - | carbamoyl-phosphate synthase, large subunit TERM 470 570282 - 570293 + g 85 -7.2 -4.84359 | opp_overlap 570271 AGGATCCGAGCGGTC GGGG TGAG CCCC TTTTTATCGGCATCG TERM 471 570340 - 570325 - G 84 -6 -4.91459 | GAACACTGAGAAAAA CCGTGC CGGA GCTCGG AAAGTGTTCGCCCGC TERM 472 571046 - 571085 + g 79 -9.2 -4.19238 | gap 1 GTAGCCCAGCGCTCG CGCC-TTGCTCAGGGCTTC CGG GGCGCTCCGGGCAATGGCG TTTTCCGGTTGCCGC carA 574289 - 573147 - | carbamoyl-phosphate synthase, small subunit TERM 473 574340 - 574323 - H 100 -12.7 -5.48825 | GAGGATGCAAAAAAA GGGAGGG GGTC CCCTCCC ACGTAGATATCGCCT TERM 474 574936 - 574952 + G 73 -13.7 -2.73994 | opp_overlap 574905, overlap 574933 GGTGTGCGGCGATGT CGTCCGC TGC GCGGACG TCGTGTTGGCAGGAT AFE_0641 574524 - 575210 + | hypothetical protein thiS 575314 - 575514 + | thiamine biosynthesis protein ThiS thiG 575559 - 576341 + | thiamin biosynthesis protein ThiG TERM 475 576684 - 576713 + G 84 -10 -4.15565 | gap 1, opp_overlap 576674, overlap 576687 576688 GGAGATTGCGGCGGC CAGCGCCCAGCCG CCGGA CGGCTGGGC-CTA TTTTGAGGTGGTGGA TERM 476 576687 - 576711 + G 82 -12.8 -3.67634 | opp_overlap 576674, overlap 576684 576688 GATTGCGGCGGCCAG CGCCCAGCCG CCGGA CGGCTGGGCC TATTTTGAGGTGGTG TERM 477 576688 - 576710 + G 79 -16.3 -2.80098 | opp_overlap 576674, overlap 576687 576684 ATTGCGGCGGCCAGC GCCCAGCCG CCGGA CGGCTGGGC CTATTTTGAGGTGGT AFE_0644 576322 - 576912 + | hypothetical protein TERM 478 577365 - 577381 + G 95 -3.6 -5.67063 | overlap 577366 TTCGGTGTATCGGCG CGGCTG ACGGA CAGCCC TTTTTTTGTGATCGA TERM 479 577397 - 577418 + G 70 -3.7 -4.66163 | gap 1 TTTTTTTGTGATCGA GGCGGATG AGTATGA CA-CCGCC TTTTTCGATAAACGT mpl 576924 - 578291 + | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase TERM 480 578818 - 578831 + GT 73 -5.2 -4.56597 | overlap 578803 GGGGTACGCATTCTG CCGG CGAGCC CCGG TTTTTACCACCACCC AFE_0646 579724 - 578873 - | ABC transporter, ATP-binding protein AFE_0647 578323 - 578940 + | 3-octaprenyl-4-hydroxybenzoate carboxy-lyase, putative AFE_0648 580860 - 579724 - | ABC transporter, permease protein, putative TERM 481 581315 - 581344 + Gr 71 -6.5 -4.14739 | gap 1 CGTCAAAGGTTATCT GGTGACCGGCATGT TCG ATATGCGGGT-ACC TTTTACCGTCACTGG AFE_0649 582105 - 581353 - | endonuclease/exonuclease/phosphatase family protein AFE_0650 580905 - 581408 + | hypothetical protein AFE_0651 582472 - 582122 - | hypothetical protein moeB 583224 - 582469 - | molybdopterin biosynthesis MoeB protein TERM 482 583107 - 583078 - G 81 -15.7 -2.87132 | gap 1 CGCGGCCGCCAGATA CTGGGCGGCC-GGG CAG CCCAGGCCGCCCAT GCCGATGATCAGCAC AFE_0653 584587 - 583361 - | hypothetical protein TERM 483 583545 - 583527 - GR 71 -8.9 -3.727 | GGGACGATAGCGAAA TGCAGGT TTCCC ACCTGCA TCTGCCAGCGCACGG AFE_0654 587003 - 584496 - | ABC transporter, permease protein TERM 484 585909 - 585894 - GR 87 -8.2 -4.59853 | CCAAGCTGGTAAAAA GGCGCC GGTC AGCGCC GCTCCCAGGCCCGCC TERM 485 586849 - 586792 - GR 76 -12.6 -2.71924 | overlap 586791 CATTGTTCGGGAAAG CTCTGCCCCGGCGCC-GTCAGGGCCAGG TCGG CCTG-CCCCGACAGGCGCCGCAGCCCGG CAGAAAAATCGCTTA AFE_0655 587674 - 587000 - | ABC transporter, ATP-binding protein trx 588124 - 588450 + | thioredoxin rho 588567 - 589823 + | transcription termination factor Rho rpmE 589898 - 590104 + | ribosomal protein L31 AFE_0660 590111 - 591349 + | malic enzyme family protein TERM 486 591523 - 591578 + G 74 -11.1 -3.44752 | gap 2, overlap 591545 591546 GCTGGCTGGTCCCAT GCGCCGACATTGGCCGCCGGTGCCGGC GGCA GCAGGCGCCA-CGCTCA-TGTTGGCGC TGATTTTTATTCTTC TERM 487 591545 - 591581 + G 89 -4.9 -5.29445 | overlap 591523 591546 CATTGGCCGCCGGTG CCGGCGGCAGCAGGCGC CAC GCTCATGTTGGCGCTGA TTTTTATTCTTCCCG AFE_0661 591356 - 592411 + | hypothetical protein TERM 488 592531 - 592507 - f 90 -6.3 -5.15634 | CACCGGAGGAAAAAA CTCGGCGGATT TGC AGCCCGGCGAG CGTCTACTTCTTGGC ilvD-2 592517 - 594358 + | dihydroxy-acid dehydratase TERM 489 594541 - 594567 + G 72 -10.9 -3.28791 | gap 1 GCGCATGAAGCGTGA CCGCGAGTACCG GGAA CGG-ATTCGCGG TTATCAGCAGGCGGT TERM 490 594953 - 594979 + G 78 -6.5 -4.59511 | gap 1, overlap 594922 TGCATCCGCTGGGAG GCGGACCGCGGC TTCG GCTTCG-TCCGC TTTTTGACGGGTATT AFE_0663 594365 - 595321 + | hypothetical protein argA 596643 - 595336 - | N-acetylglutamate synthase AFE_0665 596970 - 596659 - | BolA family protein AFE_0666 597296 - 596967 - | YCII-related domain protein ispZ 597909 - 597352 - | intracellular septation protein A AFE_0668 597972 - 598835 + | hypothetical protein AFE_0669 599723 - 598920 - | inositol monophosphate family protein TERM 491 598994 - 599010 + g 80 -10.1 -4.11216 | GGATGCGCAGATTGC CGGCGAC GAT GTTGCCG TTTTGCAGGTAACCC AFE_0670 599805 - 600575 + | RNA methyltransferase, TrmH family, group 1 cysE-2 600620 - 601369 + | serine O-acetyltransferase TERM 492 601556 - 601566 + G 77 -8.2 -4.371 | overlap 601554 GAGCAGCTCTTTGGG CGGC TGC GCCG TTTTGGTCTGGTGGA iscR 601415 - 601903 + | iron-sulfur cluster assembly transcription factor IscR TERM 493 602223 - 602233 + G 78 -2.4 -5.06414 | opp_overlap 602211, overlap 602222 AATCTGGCCCTCAAG GGCG CGG CGCA TTTTTATTCCGGCAA iscS-3 601965 - 603188 + | cysteine desulfurase IscS iscU 603213 - 603644 + | FeS cluster assembly scaffold protein IscU iscA 603654 - 603977 + | iron-sulfur cluster assembly protein IscA TERM 494 603999 - 604028 + F 89 -13.6 -3.72051 | gap 1, overlap 603995 604025 ACTCCTGTTGCCGCT GCG-GGGCGGAGT TGGGT GCTCCGCCCGCGC TTTGCGCTTCTTGCG hscB 604049 - 604594 + | co-chaperone Hsc20 hscA 604628 - 606493 + | Fe-S protein assembly chaperone HscA fdx 606494 - 606832 + | ferredoxin, 2Fe-2S AFE_0679 606832 - 607026 + | hypothetical protein trmU 607040 - 608098 + | tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase AFE_0681 609016 - 608117 - | patatin-like phospholipase family protein TERM 495 608421 - 608436 + g 83 -4.7 -5.093 | overlap 608413 CCGGTAACGCCGGCA TCCTG TGTTTT CAGGA TTTTGTTATTTTGAA AFE_0682 609219 - 609326 + | hypothetical protein TERM 496 609713 - 609693 - g 74 -7.5 -4.30719 | overlap 609665 GCTTCCCATAACAAA GCTCCCGCC GCT GGCGAAAAC ATCGAGACAGAGTTT AFE_0683 609339 - 611693 + | type I restriction-modification system, R subunit TERM 497 612207 - 612165 - g 73 -10.5 -3.57144 | gap 2, opp_overlap 612164 612165, overlap 612148 TGCGCGACCTGCAAA GCGCCGGCAACGCGGGCGAGT TCT ACAC-CCCGCG-CGCCGTCAC CCGTTTCATCGTCAA AFE_0684 611690 - 613159 + | type I restriction-modification system, M subunit AFE_0685 613165 - 614139 + | death-on-curing family protein TERM 498 615174 - 615160 - g 95 -2.7 -5.63517 | TCGCGAAAGAAAAAA CGCGG TTGTT CAGCG CCGGTGAAATACGGA AFE_0686 614145 - 615830 + | type I restriction-modification system, S subunit, putative TERM 499 617603 - 617637 + G 78 -2.1 -5.15634 | opp_overlap 617614, overlap 617614 GCTTATGCGAAGACG CCTGGAATAACTTGG GTAAG CCAATTGATCTCAGG TTTTTTGATCGAGTG AFE_0687 616123 - 617682 + | hypothetical protein AFE_0688 618180 - 617998 - | hypothetical protein AFE_0689 618147 - 618707 + | transposase, degenerate fdhD-2 619573 - 618716 - | formate dehydrogenase family accessory protein FdhD AFE_0691 619782 - 619543 - | hypothetical protein AFE_0692 622108 - 619832 - | oxidoreductase alpha (molybdopterin) subunit TERM 500 620567 - 620577 + g 80 -3.2 -5.1287 | CTCCACCGTCACGCC TTGG GGG CCAG TTTTTTGGATGTCGA TERM 501 620772 - 620762 - G 70 -3.2 -4.60041 | ACCCAGCCCGAAAAA GAAC TTG GCTC GCCCATCCTCCATCG TERM 502 621958 - 621921 - G 91 -13.3 -3.70811 | TCACAGAACTCGAAA CTGGAATGCGCCTCGGG ATCT CCCCAGGCGCAACCCGG ACAATCAAAACCTTC AFE_0693 622336 - 624267 + | sigma-54 dependent transcriptional regulator AFE_0694 624556 - 624443 - | hypothetical protein AFE_0695 624279 - 624497 + | hypothetical protein gfa 624681 - 625265 + | S-(hydroxymethyl)glutathione synthase TERM 503 625717 - 625735 + G 71 -5.8 -4.4078 | GGGGAAGGGACTGAT GCCCGACG GGA CGACGCGC TTTTCGTTCAAAGGC AFE_0697 625364 - 626473 + | S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase TERM 504 626893 - 626911 + G 70 -3.1 -4.58395 | gap 1, opp_overlap 626884, overlap 626886 626894 GAACATTTCCCGGCC T-CTCCGG AACG CCGGGGTA TTTTTGGGCACTCCA fghA 626473 - 627327 + | S-formylglutathione hydrolase cysB 628314 - 627352 - | sulfur assimilation transcriptional regulator, LysR family hupR 629818 - 628370 - | hydrogenase sigma-54 dependent DNA-binding response regulator TERM 505 629801 - 629788 - G 70 -3.1 -4.64676 | gap 1, opp_overlap 629790 629799, overlap 629789 629790 TCAGGGCCAACAAAA TGGCGG GAA CCG-CA CGCTGGCTTGCTTCC TERM 506 629954 - 629979 + H 74 -7.7 -4.08216 | gap 1 ATCCTTTCTGCTTAA TGGCTCATGTGG TAC CCATATGA-CCA TTTTAGAGGAGGTCA TERM 507 630567 - 630578 + G 76 -5.8 -4.58283 | CTGGATGATCTGCAG CGTC CAAA GACG TTTTTCAAGAGCTTC TERM 508 630754 - 630778 + G 81 -13.5 -3.28712 | opp_overlap 630754 GGCAGTCGTCCAAAA CCCGGGCGGGG ATG CCCTGTCTGGG TTGTACCGAACCGGA hybA 630000 - 630962 + | hydrogenase-2, small subunit hybC 631013 - 632611 + | hydrogenase-2, large subunit TERM 509 632659 - 632629 - f 100 -12.5 -4.58395 | CGTATGGTCTAAAAA GGGTCGGATACCG GACTG CGGTGTCCGGCCC CCAAAAATTCAGCCG AFE_0703 632701 - 633021 + | hypothetical protein AFE_0704 633040 - 633372 + | hypothetical protein AFE_0705 633375 - 633848 + | hydrogenase maturation protease TERM 510 633931 - 633963 + G 78 -9.8 -3.87149 | overlap 633933 TACCATGGCCGGTCT CCTGGCGGTTGCCG TGCTC TGGCGATCGCCATG TTTGCATTTGATCCC TERM 511 633933 - 633961 + G 74 -11 -3.51904 | overlap 633931 CCATGGCCGGTCTCC TGGCGGTTGCCG TGCTC TGGCGATCGCCA TGTTTGCATTTGATC AFE_0706 633845 - 634174 + | hypothetical protein TERM 512 634346 - 634319 - g 72 -11.2 -3.28791 | overlap 634337 AGGTCGCCTTGAGAA CCGCCCGGGATG ACAC CATTCCGGCCGG CGAACGTGCGGAAAT AFE_0707 634273 - 635253 + | hypothetical protein AFE_0708 635278 - 635505 + | hypothetical protein AFE_0709 635534 - 635758 + | hypothetical protein AFE_0710 635775 - 636665 + | iron-sulfur cluster-binding protein, Rieske family TERM 513 637133 - 637145 + G 70 -4.8 -4.52589 | opp_overlap 637142 CGGCGGATCTGGTTC TCGG CCAAA CCGA TTTTGTGTCGGCGGA TERM 514 637488 - 637520 + G 71 -7 -4.25104 | gap 1 GCCACAGCGCAATGG TCAGGC-GGCCGATA TGGT TCTCGGACAGCCTGA TTTTGCTCAGAACGC AFE_0711 636658 - 637854 + | NHL repeat protein TERM 515 639710 - 639735 + G 76 -12.5 -3.35046 | opp_overlap 639704, overlap 639704 639707 639724 CAGGAATATCTGCAC GCCGCTCTGCA GTTC TGCCGGGCGGC TGTTTGACGCCGTCA hypF 637851 - 640262 + | [NiFe] hydrogenase maturation protein HypF hypC-1 640253 - 640546 + | hydrogenase assembly chaperone HypC TERM 516 640644 - 640615 - g 72 -2.9 -4.74103 | gap 1 CGGTCAAGCCAAAAA TCC-GCAGCG GGAAAAGATGG CGCTGCTGGA GTCTGTGCGGCAGAA gmhA 640565 - 641260 + | phosphoheptose isomerase hypD-1 641244 - 642389 + | hydrogenase expression/formation protein HypD hypE 642389 - 643447 + | hydrogenase expression/formation protein HypE hypA-1 643461 - 643790 + | hydrogenase nickel insertion protein HypA hypB-1 643935 - 644708 + | hydrogenase accessory protein HypB AFE_0719 644734 - 646143 + | amino acid permease family protein AFE_0720 646208 - 647458 + | FAD-dependent oxidoreductase AFE_0721 647543 - 647941 + | hypothetical protein ilvA 649476 - 647956 - | threonine ammonia-lyase, biosynthetic TERM 517 649374 - 649418 + g 70 -10 -3.53091 | opp_overlap 649368 649371 GCTTGAACAGCACCT CG-CGCTGCAGGCGCGCGCTCA ATT TGGGCGCG-GCTTCCAGGGGCG TTTCCCGGGCCACAT AFE_0723 649844 - 649473 - | helix-turn-helix domain protein AFE_0724 650806 - 649841 - | hydrolase, alpha/beta hydrolase fold family TERM 518 650587 - 650535 - G 76 -6.8 -4.51196 | gap 1, opp_overlap 650540 650572, overlap 650538 CGGAAATTGATAAAA CAGCCTGCCCAGCCCCTCCGCCGCA GGCC TGCCGCGAGGGCGC-GGGCATAATG TCCCCGCGAACTACT AFE_0725 651012 - 650803 - | hypothetical protein AFE_0726 651358 - 652134 + | hypothetical protein TERM 519 652182 - 652149 - g 100 -11.7 -5.00884 | gap 1, overlap 652150 ATGCGTCGTAAAAAA CCCGCCCCGG-TATTG GTG CCATATCCGGGGCGGC GCTGGCGTCGCTCGC TERM 520 652181 - 652150 - g 90 -15.2 -3.60048 | gap 1, overlap 652149 TGCGTCGTAAAAAAC CCGCCCCGG-TATTG GTG CCATATCCGGGGCGG CGCTGGCGTCGCTCG AFE_0727 652134 - 653033 + | 1-acyl-sn-glycerol-3-phosphate acyltransferase hemE 654117 - 653053 - | uroporphyrinogen decarboxylase TERM 521 653908 - 653895 - G 89 -6.7 -5.07567 | overlap 653899 GGATATCCGAAAAAA GGATG GCGG CATCC AGGGGGAAGCGGTCG gltD 655518 - 654121 - | glutamate synthase, small subunit gltB 659969 - 655542 - | glutamate synthase, large subunit TERM 522 656815 - 656780 - G 73 -13.2 -2.71712 | opp_overlap 656779 656775 656775, overlap 656779 656783 CGTCGGCCTGCAAAC GCACCCGGTGCCGCAA GTGG TTGCGGCGCAGGGTGA CCTGGGTTTCTGCCA TERM 523 656812 - 656783 - G 72 -13.5 -2.64155 | opp_overlap 656779 656775 656775, overlap 656780 656779 CGGCCTGCAAACGCA CCCGGTGCCGCAA GTGG TTGCGGCGCAGGG TGACCTGGGTTTCTG TERM 524 658689 - 658713 + g 70 -10 -3.47349 | overlap 658681 TTCGGCATACAGATC CAGCCATTCC CGGTA GGGGTGGCTG TTCTGGATTTGCGCG TERM 525 659387 - 659372 - G 81 -4.6 -5.00616 | opp_overlap 659386 GGTCGGGGTAAAAAA CCGGGA GATT TTCCGG CAATACCATGCCTTT TERM 526 659458 - 659443 - G 85 -2.5 -5.44119 | overlap 659444 GTCACCGCAAAAAAA CTGCC CTCGTC GGCAA AGCGTTTTTCTACCC AFE_0731 661306 - 660107 - | deoxyguanosinetriphosphate triphosphohydrolase, putative TERM 527 660752 - 660766 + gr 85 -7.1 -4.85782 | overlap 660744 GCGTTCACCCACGTC GCCCA GGTCG TGGGC TTTATTTTTGGCGCA thyX 662072 - 661272 - | thymidylate synthase, flavin-dependent aroB 663201 - 662107 - | 3-dehydroquinate synthase TERM 528 662637 - 662617 - G 77 -3.9 -4.9218 | opp_overlap 662617, overlap 662619 GAGCCAGGAGAAAAA GCCCTGATC GTT GATGAGGCC ATATTTGATCACTTC aroK 663846 - 663307 - | shikimate kinase TERM 529 663800 - 663767 - G 72 -10.9 -3.32023 | gap 1, opp_overlap 663767 663766 663769, overlap 663765 663761 663772 TCCACATAAGGAAGA CG-CAAGCGGGCGGCC AGA AGCCGCCCGATGGTCG ATTTGCCCGATCCCA TERM 530 663794 - 663772 - G 74 -12.6 -3.22208 | opp_overlap 663769 663767 663766, overlap 663765 663767 663761 ATAAGGAAGACGCAA GCGGGCGGCC AGA AGCCGCCCGA TGGTCGATTTGCCCG AFE_0735 666197 - 663843 - | fimbrial assembly protein PilQ, putative TERM 531 665676 - 665700 + g 74 -12.7 -3.21218 | overlap 665694 GGGCACAGGTAGTGC CGCGGCCGCCG GTG CGGGGGCCACG TTGCTGGTAGCGGGT TERM 532 666243 - 666277 + r 71 -4.3 -4.62069 | gap 1, overlap 666245 666247 666249 TAGGCAAGTCGTGTT CAGT-GGCTGTTCTGC ATCT GCAGGACAGTCTGCTC TTTTTGGAATCCACC TERM 533 666247 - 666272 + r 76 -11.9 -3.02233 | overlap 666245 666243 666249 CAAGTCGTGTTCAGT GGCTGTTCTGC ATCT GCAGGACAGTC TGCTCTTTTTGGAAT AFE_0736 666790 - 666242 - | type 4 fimbrial biogenesis protein PilP, putative AFE_0737 667440 - 666787 - | fimbrial assembly protein PilO, putative TERM 534 667039 - 667051 + g 80 -3.4 -5.08601 | GAGCCTTACCGGTAT CTTC GCGTA GAAG TTTTTGTTGACCTCA AFE_0738 668030 - 667437 - | type IV pilus biogenesis protein PilN TERM 535 667795 - 667828 + g 84 -3.1 -5.29385 | overlap 667783 667778 CGGGCGAGCAGTTGG TCGCGTTTCTTGC GCAGGTCG GCGACGGACGCGA TTTTTTGATTCAGTT TERM 536 667857 - 667871 + g 81 -4.2 -4.87626 | overlap 667858 TTGGGTGGTGACGTT TTGCAG ATA CTGCAC TTTTTGCTGTTCGGC AFE_0739 669091 - 668027 - | type IV pilus assembly protein PilM TERM 537 668639 - 668653 + g 76 -5.6 -4.61482 | overlap 668632 TTCCAGCACCGCTGC GCGGTC TTC GACGGC TTCTTTTTTGCACGC TERM 538 668920 - 668902 - G 72 -11.6 -3.29511 | overlap 668903 GGGATCGTTCCAGAA TGGCGCGC ACT GCGCGCCT GACTGCCTCCGCGTC TERM 539 668919 - 668903 - G 76 -15.1 -2.57564 | overlap 668902 GGATCGTTCCAGAAT GGCGCGC ACT GCGCGCC TGACTGCCTCCGCGT AFE_0740 669137 - 669307 + | hypothetical protein TERM 540 669618 - 669632 + G 70 -12.8 -2.88999 | GGGGGCGCTGCTGCA CGCGCG GGT CGCGCG TCTCGTCTATGGCGC TERM 541 669750 - 669770 + G 77 -3.1 -5.00616 | overlap 669738 669751 669752 CTTGTTGGCGGGGCC GTCCGCAAC TCT GCTGCGGGA TTTTTTCCAGGCGCG AFE_0741 669319 - 669852 + | cytidine and deoxycytidylate deaminase family protein AFE_0742 669849 - 670280 + | conserved hypothetical protein TIGR00149 AFE_0743 670280 - 670705 + | hypothetical protein TERM 542 670705 - 670729 + F 80 -9.1 -4.20883 | overlap 670706 GATTTTTCAGGACTG AGCGGGTTGGC ATT GCCGCCCCGCC TTTTACCCCTTTTTG TERM 543 670706 - 670728 + F 81 -12.6 -3.11445 | overlap 670705 ATTTTTCAGGACTGA GCGGGTTGGC ATT GCCGCCCCGC CTTTTACCCCTTTTT TERM 544 670995 - 671031 + G 70 -9.9 -3.54424 | GGCTGCCATCCGCCA GGTGGCGTCGCCCGGGG CGG CGCTGGCCGGCACCGCC TTTCGCAACCTCGCA TERM 545 671281 - 671261 - g 84 -9 -4.46757 | gap 1, overlap 671262 AACAGATTCAGAAAA CCCTGCAGG GACA CCTGC-GGG TAGCGGGAGCGAAGA AFE_0744 670768 - 672306 + | MutS domain V protein TERM 546 672410 - 672392 - f 86 -3.9 -5.31275 | gap 1, opp_overlap 672392 CCTCACCACAAAAAA TGTCTAGC TTTT GCT-GACA CTTTGTTCCCAGAGG ilvB 672435 - 674180 + | acetolactate synthase, large subunit, biosynthetic type ilvN 674183 - 674668 + | acetolactate synthase, small subunit ilvC 674720 - 675736 + | ketol-acid reductoisomerase TERM 547 675769 - 675819 + F 100 -17 -4.5442 | GCGGCGATCTGCATG GGGCGGAATAGCTGTGGGCAAA AACGCAA TTTGCCTGTGGCGATTCCGCCC TTTTATCGTTGCCCG psd 675855 - 676517 + | phosphatidylserine decarboxylase TERM 548 676763 - 676775 + G 75 -2.6 -4.96848 | overlap 676758 GCTTTTGGTATGGCA CCGG CCATT CTGG TTTTTCTGTGGGGGC TERM 549 676815 - 676825 + G 70 -4.6 -4.55295 | TCGGCAATTTTGGCT GGCT GGG GGCC TTTGTTTATACGGCC pssA 676514 - 677266 + | CDP-diacylglycerol--serine O-phosphatidyltransferse AFE_0749 679095 - 677242 - | pyruvate kinase barrel domain protein TERM 550 677451 - 677464 + g 74 -3.7 -4.77759 | CGGTGAATTCGGGCC GGGAG ATGA CGCCC TTTTTGGTGAGTTGT TERM 551 678050 - 678080 + g 100 -19 -3.53012 | opp_overlap 678034 678033, overlap 678051 CTGGCCGGCAGCCCG TTCAGGGCGGGCCC GCC GGGTCCGCCCTGAC TTTGCAGCAGGAGCG TERM 552 678051 - 678079 + g 100 -22.5 -2.71712 | opp_overlap 678034 678033, overlap 678050 TGGCCGGCAGCCCGT TCAGGGCGGGCCC GCC GGGTCCGCCCTGA CTTTGCAGCAGGAGC AFE_0751 679283 - 679708 + | universal stress family protein AFE_0752 680222 - 679797 - | GTP cyclohydrolase I family protein TERM 553 681842 - 681786 - g 74 -5.9 -4.57073 | gap 4, overlap 681803 CAGCGGCTGCAAAAA CCGCAGGCGCAAAATGA-CC-CC-GCCGG CTC CCGGCTGGTGGATCAGAT-GCGCGTGCAG CCCGGCTGGGAGCGG smc 680283 - 683735 + | chromosome segregation protein SMC AFE_0754 683810 - 683962 + | hypothetical protein AFE_0755 683995 - 684963 + | hypothetical protein AFE_0756 685661 - 684969 - | HAD-superfamily subfamily IB hydrolase, TIGR01490 TERM 554 685980 - 685950 - g 88 -13.2 -3.66356 | ATCCCCAATGGCAAA GCGCCGACTCTCCG ACC CAGAGGGTCGGGGC GGCTCCGGTGGAGGT ligA 685778 - 687793 + | DNA ligase, NAD-dependent AFE_0758 687796 - 688311 + | ATP synthase F1, epsilon subunit, putative TERM 555 688815 - 688827 + G 84 -3.3 -5.25803 | overlap 688807 688816 GCTGGCATCGTCCCG ACGAG TTG CTCGA TTTTTTCTCCGGCTT TERM 556 688857 - 688874 + G 75 -8.4 -4.20707 | overlap 688841 TGCCGGTACGTCGAC TGGCGG TGCATT CCGCCA TATTTTTTCCTGCCG AFE_0759 688328 - 688978 + | methyltransferase, putative AFE_0760 689856 - 689122 - | hypothetical protein AFE_0762 689944 - 690111 + | hypothetical protein AFE_0761 691051 - 690101 - | transcriptional regulator, LysR family TERM 557 690166 - 690179 + g 74 -3.8 -4.74103 | opp_overlap 690166 AACGGGCGGCAGAGA CCGA AATCCC TCGG TTTTTGAGTTGCGCA TERM 558 690836 - 690820 - G 75 -2.1 -4.93318 | overlap 690822 TATAACCCAGAAAAA CTTCGCC TGC GGCCGAG AGACGCATCCCGCGC AFE_0763 691285 - 693621 + | TonB-dependent receptor, putative AFE_0764 693860 - 694654 + | hypothetical protein AFE_0765 694773 - 694886 + | hypothetical protein AFE_0766 695116 - 695229 + | hypothetical protein AFE_0767 695199 - 695345 + | hypothetical protein TERM 559 695875 - 695908 + G 81 -6 -4.84359 | gap 1 TCCGTTACCGGCGGT GTCGCGGATGCGCTG ATTGC CACCGCGTCTG-GAC TTTTTATCGCCATGA AFE_0768 695389 - 696093 + | MotA/TolQ/ExbB proton channel family protein TERM 560 696512 - 696498 - g 74 -5.6 -4.57073 | opp_overlap 696498 696497 GATGCTTGTCAAAAA GCGGGT GTA ACCAGC ATTGGTATTGCGGCG AFE_0769 696141 - 696539 + | biopolymer transport protein, ExbD/TolR family TERM 561 697300 - 697315 + G 73 -9 -3.86015 | opp_overlap 697300 697297 TGCAGCAGTAAAGGA TGGTGG CTTC CCACCA TTTCTCAAAAAGATG AFE_0770 696716 - 697387 + | TonB family protein AFE_0771 697445 - 698869 + | cytosine/purines/uracil/thiamine/allantoin permease family protein AFE_0772 698866 - 700095 + | guanine deaminase, putative TERM 562 700436 - 700456 + G 85 -6.1 -5.14563 | CGCTGTAAGGCCCAG CAGATTCGT CAT ACGGAACTG TTTTTTGATCCGCAG TERM 563 701093 - 701106 + G 81 -5.9 -4.84359 | CTTCTTGAGCGTAAC GCCGT TGAA GCGGC TTTTTGTACGGATCA add 700142 - 701185 + | adenosine deaminase TERM 564 702015 - 702026 + G 76 -7.2 -4.54727 | TCTCGGGGATGTGGC CGCG CTTT CGCG TTTTGGTTTGGCGGA AFE_0774 701209 - 702210 + | phosphorylase, putative AFE_0775 702272 - 704530 + | xanthine dehydrogenase, molybdenum-binding subunit, putative AFE_0776 704533 - 704982 + | xanthine dehydrogenase, iron-sulfur binding subunit, putative AFE_0777 704982 - 705848 + | xanthine dehydrogenase, FAD-binding protein, putative AFE_0778 705852 - 706436 + | hypothetical protein AFE_0779 706455 - 707546 + | cyanuric acid amidohydrolase AFE_0780 707543 - 708484 + | xanthine dehydrogenase accessory factor, putative TERM 565 708510 - 708496 - f 72 -3.5 -4.78029 | TTAATAAAAGGAAAA GCAGA ATGAA TCCGC CCGGAACAGATGCTG AFE_0781 708501 - 708701 + | hypothetical protein AFE_0782 708698 - 710095 + | amidohydrolase, AtzE family AFE_0783 710055 - 710495 + | hypothetical protein AFE_0784 710504 - 711112 + | hypothetical protein ggt 711109 - 712728 + | gamma-glutamyltranspeptidase TERM 566 713090 - 713102 + T 77 -4.8 -4.85599 | opp_overlap 713090 AATGTGTGACGAAAG CGGT CGGGA ACCG TTTTTGTAGAGTAGG AFE_0786 713681 - 713160 - | heme-utilization protein HutZ, putative TERM 567 713814 - 713804 - g 85 -6.8 -4.77778 | overlap 713807 AACAAATATACAAAA GACG ATG CGTC CCCGGATCTTGCGCC AFE_0787 713734 - 714783 + | polysaccharide deacetylase family protein AFE_0788 714875 - 716194 + | non-heme halogenase, putative AFE_0789 716197 - 717270 + | dioxygenase, putative AFE_0790 717267 - 718070 + | acyltransferase, putative AFE_0792 718067 - 718828 + | glycosyl transferase, group 2 AFE_0791 720156 - 718810 - | Na+/H+ antiporter, putative TERM 568 720015 - 720041 + g 78 -10.7 -3.86346 | opp_overlap 720015, overlap 720016 CGATTTCGCCAACCA CCGCCGCCTGG CCGAT CCTGGCGGCGA TTTCTCCACCCATGC TERM 569 720016 - 720040 + g 75 -14.2 -2.91593 | opp_overlap 720015, overlap 720015 GATTTCGCCAACCAC CGCCGCCTGG CCGAT CCTGGCGGCG ATTTCTCCACCCATG AFE_0793 720894 - 720172 - | 3-oxoacyl-(acyl-carrier-protein) reductase, putative TERM 570 720744 - 720730 - G 80 -11.4 -3.77832 | GTCGAAAGCCAACAA GGTGGC ATC GCCACC CGTGGCGACGATAGA AFE_0794 721387 - 720887 - | hypothetical protein AFE_0795 722193 - 721378 - | hypothetical protein AFE_0796 723399 - 722206 - | 3-oxoacyl-(acyl-carrier-protein) synthase, putative TERM 571 723039 - 723014 - G 70 -3.1 -4.60797 | overlap 723015 GCGGCATAGACAAAA TCCGCTGGCAG GCAT CCGCTAACGGG GTCGAGATGCCGAAA AFE_0797 723703 - 723969 + | acyl carrier protein, putative AFE_0798 726397 - 724043 - | hypothetical protein AFE_0799 726954 - 726394 - | hypothetical protein TERM 572 726708 - 726721 + g 85 -2.4 -5.40004 | GCACGTCACCTTGTA TGAG CATAAC CTCA TTTTTTGGTTTGATG AFE_0800 727976 - 727128 - | hypothetical protein AFE_0801 728278 - 728048 - | hypothetical protein AFE_0802 729716 - 728355 - | AMP-binding protein TERM 573 729233 - 729219 - G 72 -11.4 -3.40073 | ACGGCCATCAAGTAA GCCCAG ACG CTGGGC TTCGGCGCGGACGCT AFE_0803 730439 - 729744 - | hypothetical protein AFE_0804 730967 - 730635 - | hypothetical protein AFE_0805 732637 - 731093 - | auxin-responsive GH3-related protein TERM 574 732010 - 732044 + g 75 -7.9 -4.26076 | gap 2, overlap 732019 TCAGCACCCGGATGG GCTCGTG-G-ATCGCGG TTT CCGCGATGCGTTCGAGC TTTTCATCCCAATCG AFE_0806 735042 - 732634 - | penicillin amidase family protein TERM 575 733866 - 733853 - GH 70 -9.5 -3.31322 | CCGAAGGGGGTATAA CGGCG GACA CGCCG GGCGGGAAAGCAAAA TERM 576 734100 - 734144 + gH 70 -6.9 -4.07568 | opp_overlap 734100 734101, overlap 734103 CGTTGGGGAGGGAAA CCCCCAGGTGCGGGTCGCT GGCGATG AGCGCCCCGCCGCTGGTGC TTTTCCACGGCGACA TERM 577 734103 - 734141 + gH 72 -11.6 -3.08032 | opp_overlap 734101 734100, overlap 734100 TGGGGAGGGAAACCC CCAGGTGCGGGTCGCT GGCGATG AGCGCCCCGCCGCTGG TGCTTTTCCACGGCG AFE_0807 735031 - 735168 + | hypothetical protein AFE_0808 736258 - 735209 - | oxidoreductase, FAD-binding subunit AFE_0809 738606 - 736258 - | oxidoreductase, molybdopterin binding subunit TERM 578 736852 - 736836 - G 73 -13.7 -2.78384 | CCTCCTGCCAGGAGA TGCGCCG CTG CGGCGCA TCGCGCAAATGGATC TERM 579 737396 - 737417 + g 76 -13.7 -3.01712 | TCATCGATGCCCTGT TCCAGGGCG AAGG CGCCCTGGG TGTTGCCGGGGCCGC AFE_0810 739136 - 738609 - | oxidoreductase, iron-sulfur subunit AFE_0811 739221 - 739349 + | hypothetical protein AFE_0812 739593 - 739384 - | hypothetical protein AFE_0813 741214 - 739817 - | major facilitator family transporter AFE_0814 742905 - 741520 - | voltage-gated chloride channel TERM 580 741874 - 741864 - G 71 -5.4 -4.42788 | GGGAAGGCGAGAAAA TTCC CCC GGAA CCACCGGTACCGATC TERM 581 742458 - 742440 - G 95 -11 -4.62069 | CCGGCACCCGAAAAA GGTACCCT ACC AGGGCACC GATAGCGGCACCGAA AFE_0815 744691 - 742919 - | voltage-gated chloride channel TERM 582 743848 - 743888 + g 81 -8.1 -4.72272 | opp_overlap 743849 743850, overlap 743849 743850 TGAAATAAATGACCA AGCCTACGCCCAGCATGCC CGC GGCGTGTCGTGCGTAGGGA TTTTTGATCCAGCGC TERM 583 743849 - 743887 + g 74 -11.6 -3.43042 | opp_overlap 743849 743850, overlap 743848 743850 GAAATAAATGACCAA GCCTACGCCCAGCATGCC CGC GGCGTGTCGTGCGTAGGG ATTTTTGATCCAGCG TERM 584 743850 - 743886 + g 76 -15.1 -2.65504 | opp_overlap 743850 743849, overlap 743849 743848 AAATAAATGACCAAG CCTACGCCCAGCATGCC CGC GGCGTGTCGTGCGTAGG GATTTTTGATCCAGC TERM 585 745687 - 745714 + G 100 -15.6 -5.43866 | ATGGCCATTCCCAAC CCGGCAAGGCGT TCCC GCGCCTTGTCGG TTTTTTTGGACCTTA AFE_0817 744862 - 745752 + | transcriptional regulator, LysR family AFE_0816 745876 - 745736 - | hypothetical protein AFE_0818 748331 - 745902 - | plasma-membrane proton-efflux P-type ATPase TERM 586 746115 - 746097 - G 73 -4.4 -4.59773 | overlap 746099 GGTGACGTTGAAAAA GCTCCAGC TCG GCCAGGGC CGCTGCCAGATGGCG TERM 587 746591 - 746634 + g 95 -20.2 -2.70932 | opp_overlap 746578 GATCGGCCGCGGCGC GGGCGGCGTCGGTGGCGCCG CTGA CGGCGATGCCGACGTCGGCC TGCTTCAACGCGGGG TERM 588 747725 - 747714 - G 74 -5.8 -4.56775 | AGTCTTGCCGAAAAA GGTC TGCA GACC CGTTGCCGTCACCAC AFE_0819 748692 - 748853 + | hypothetical protein AFE_0820 749567 - 749367 - | hypothetical protein AFE_0821 749961 - 749485 - | hypothetical protein AFE_0823 749954 - 750226 + | hypothetical protein AFE_0822 750522 - 750211 - | hypothetical protein AFE_0824 750805 - 750515 - | hypothetical protein AFE_0825 750844 - 750993 + | hypothetical protein TERM 589 751786 - 751773 - g 72 -2.3 -4.81249 | CGCCAAAGGCAAAAA GCGCA CCGT TGCCC CGCTGAAACTGTTCG AFE_0826 751066 - 752628 + | type I restriction-modification system, M subunit TERM 590 752704 - 752716 + G 74 -6.9 -4.42464 | overlap 752703 752715 ACCTATCCGGCGACC CGCTG CTG CGGCG TTTCTTTGAGACGTT TERM 591 752715 - 752729 + G 71 -6.4 -4.1891 | overlap 752704 GACCCGCTGCTGCGG CGTTTC TTT GAGACG TTTCTCTTCGAGCGC TERM 592 752978 - 753004 + G 71 -8.7 -3.78329 | gap 1, overlap 752997 CGCCTTGATCCGCGA CGCCG-GGGACA CGCT TGTCCGGCGGCG TTTCAATTCCTCCGA TERM 593 753657 - 753642 - g 70 -3.2 -4.58395 | gap 1, overlap 753643 753644 CTGACCCTCGAAAAA CTGCGCG GCC CGCAC-G CCTCCGTCCCGCACA AFE_0827 752625 - 754205 + | ATP-dependent DNA helicase, putative TERM 594 754455 - 754427 - gf 89 -13.3 -3.61715 | overlap 754428 754430 754452 754453 GAGTTGGCGGAAGAA TCAGTTATCCGAA AAT TTCGGATAACTGC CGCCGATGGCAAAAC TERM 595 754454 - 754428 - gf 90 -16.8 -2.76815 | overlap 754427 754430 754452 754453 AGTTGGCGGAAGAAT CAGTTATCCGAA AAT TTCGGATAACTG CCGCCGATGGCAAAA TERM 596 754452 - 754430 - gf 81 -13.6 -2.93073 | overlap 754428 754427 TTGGCGGAAGAATCA GTTATCCGAA AAT TTCGGATAAC TGCCGCCGATGGCAA AFE_0828 754202 - 755269 + | hypothetical protein AFE_0829 755229 - 756458 + | type I restriction-modification system, S subunit AFE_0831 756547 - 757095 + | hypothetical protein AFE_0830 757255 - 757067 - | hypothetical protein AFE_0832 757229 - 758089 + | hypothetical protein AFE_0833 759162 - 758164 - | site-specific recombinase, phage integrase family AFE_0834 760096 - 759155 - | site-specific recombinase, phage integrase family AFE_0835 761337 - 760093 - | site-specific recombinase, phage integrase family TERM 597 760766 - 760753 - G 88 -2.3 -5.48054 | AGCAAAAGCAAAAAA GCTGC GTAA GGAGC TGGCCAATGAGCCCA TERM 598 761518 - 761465 - H 79 -11.1 -3.65425 | overlap 761476 761511 GCCACATATTTTAAA GCGCCACATAATGGTACTTATGTGG TCGG CCACATAAATACCAGAATGGGAAGC AGGAGTGCTTCTGGG TERM 599 761507 - 761476 - H 95 -15.4 -3.51161 | overlap 761465 TAAAGCGCCACATAA TGGTACTTATGTGG TCGG CCACATAAATACCA GAATGGGAAGCAGGA AFE_0836 761560 - 762087 + | transposase, degenerate TERM 600 762838 - 762812 - g 82 -12.3 -3.64703 | GGGTGCTCACCCAAA TGGCGGCCG AACTCCTGG CGGCCGCCA CCCAACGCCAACTGG AFE_0837 762091 - 762930 + | general secretion pathway protein A, putative AFE_0838 762941 - 763144 + | hypothetical protein TERM 601 763164 - 763200 + T 100 -10.8 -5.24129 | opp_overlap 763164 763162 CTGACCAATCCAAGA GCCATGCCGCCCCGTT CACAA AATCGGGCTGCGTGGC TTTTTTATGCCGCCG AFE_0839 763509 - 763384 - | hypothetical protein TERM 602 763658 - 763645 - g 80 -3.1 -5.07652 | GCGCGGAAAAGAAAA CAAAC GGTC GCTTG AGCACGGTCGATTTA TERM 603 764894 - 764868 - g 71 -5.8 -4.30987 | ACCCTTCACAAGAAA GTCGATAGGCTC CAA GAAGCAATCGAC CAAAGAGGCTCGAAA TERM 604 766268 - 766278 + G 73 -4.6 -4.59982 | AACTGATATGGGCGT TCGC GAA GCGG TTTGTTTGCTTCTCG AFE_0840 763539 - 766352 + | hypothetical protein TERM 605 766437 - 766465 + G 80 -11.5 -3.72893 | GTTGGACCTTTGTGT CCCGCGAGGCAGC CGA GCAGCGGCGCGGG TTTGATCCGGACGTG TERM 606 766944 - 766956 + G 78 -4.8 -4.7254 | AGCTCTTTACTGCCA CCGA CGCCA TCGG TTTTTCCTACGGGGT TERM 607 768592 - 768562 - g 71 -9 -3.73234 | overlap 768560 768565 CAAGGAATACAAAGA GATCGAGATGCTCT ACG AGATCATCTCGCCC GATGCCTTCCTGCGC AFE_0841 766358 - 769279 + | type I restriction-modification system, R subunit AFE_0842 769297 - 769632 + | hypothetical protein TERM 608 769635 - 769666 + T 70 -6.6 -4.08064 | opp_overlap 769611, overlap 769633 GCGTACGCGCTGAAG CAGACCGCTGCA CTTATCGT TGCAGTGTTCTG TTTTGCACCCGCCTT AFE_0843 770032 - 769808 - | hypothetical protein TERM 609 770933 - 770945 + G 74 -5.5 -4.56597 | opp_overlap 770923 AGTGAGGACGAAGCC GTTCG GAT CGAGC TTTTTGGCGACGAAC TERM 610 772284 - 772274 - g 83 -2.4 -5.23316 | overlap 772282 GACGACATCAAAAAA CTGG AAA CCCG CCTTCTGGGAACCGA uvrB 770300 - 772327 + | excinuclease ABC, B subunit AFE_0846 772432 - 773481 + | alcohol dehydrogenase, zinc-containing pyrG 773696 - 775333 + | CTP synthase TERM 611 776150 - 776136 - g 83 -4.2 -5.02074 | overlap 776137 776140 TCATGTTGTAAAAAA CCAGGA TTT CCCTGA AAACTACCCTGAGGA kdsA 775330 - 776175 + | 3-deoxy-8-phosphooctulonate synthase eno 776172 - 777452 + | enolase TERM 612 777849 - 777832 - gT 73 -9.8 -3.56643 | GTGATACCCGCCAAA GGCGCC TTCGAC GGCGCC CGGACCACCACTCAG AFE_0850 777406 - 777873 + | septum formation initiator family protein efp 778487 - 777927 - | translation elongation factor P AFE_0852 778578 - 778880 + | hypothetical protein TERM 613 780088 - 780104 + G 76 -12.3 -3.38046 | overlap 780065 780086 GGGACGGCGGCGCAT GCTCCTG TTG CAGGAGC TCTTTCAACTCCCGG uvrC 778958 - 780784 + | excinuclease ABC, C subunit TERM 614 781191 - 781152 - g 73 -4.9 -4.62069 | gap 1, overlap 781153 GGGTGAGCGCAAAAA GGTGGCCGTCTCCTGGCT GGGTA AGGC-GAAGGCGGCCACG CAGATGATTTCGATC pgsA 780787 - 781377 + | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase TERM 615 781482 - 781503 + F 84 -5.9 -5.08255 | opp_overlap 781482, overlap 781461 CCGCTCCACAATCGA GGGAAAG CGTTCAGT CTTTCCC TTTTCTTTTAAGGCT TERM 616 782021 - 782034 + G 72 -2.3 -4.83615 | GACCACGGTACTGGA GATCC CGCT GGACC TTTTTGTCGCGACTC TERM 617 782080 - 782107 + G 74 -6.2 -4.46212 | TGTTGATGCGCCAGA TGCTGGCGCG CCTCAGTA TGCGCCTGCA TTTTCTGGTCAAGGA AFE_0857 781692 - 782381 + | transcriptional regulator, Crp/Fnr family AFE_0858 782802 - 782410 - | hypothetical protein AFE_0859 784057 - 782846 - | pyridine nucleotide-disulfide oxidoreductase AFE_0860 785122 - 784139 - | iron-sulfur cluster-binding protein/oxidoreductase, FAD/NAD-binding TERM 618 785170 - 785144 - R 83 -10.1 -4.20817 | CATACCCCAAAATAA TGGCGCACCTG AGCAA CCGGTACGCCA ATGGCAAGGTGCCAA AFE_0861 785647 - 785186 - | globin domain protein AFE_0862 786937 - 785774 - | drug resistance transporter, putative TERM 619 786158 - 786168 + g 79 -8.2 -4.46233 | overlap 786152 786156 TCCGGGGTGGACATG CCGC ATG GCGG TTTCTTTCACGTTGG TERM 620 786834 - 786824 - G 70 -4.6 -4.56597 | CTGCCCCCGCAAAAA CCAC CAC GCGG CCCATATCAATCCGG TERM 621 786873 - 786892 + g 70 -3.4 -4.67234 | opp_overlap 786874, overlap 786874 AAAATGAGGGTAACG AGCACCAG CAGC CGGGTGCG TTTTTCCGGTTGGAT AFE_0863 788373 - 786940 - | RND efflux system, drug efflux transporter, outer membrane lipoprotein TERM 622 787447 - 787429 - G 71 -5.9 -4.39426 | CACATCGGGATAAAA GGCTGCG CGTGC CGCACCC ACCTGTTGCGCCGCG TERM 623 787701 - 787737 + g 73 -10.1 -3.63515 | opp_overlap 787701 CTTCCTGCAGATAAA CAGCGCGGGCATCGC TCAGGCC GTCATGCCAGCGCTG TTGTTCCAGGTGGAG TERM 624 787737 - 787701 - G 71 -7.9 -4.03234 | opp_overlap 787701 CTTCCTGCAGATAAA CAGCGCGGGCATCGC TCAGGCC GTCATGCCAGCGCTG TTGTTCCAGGTGGAG AFE_0864 789917 - 788373 - | drug resistance transporter, EmrB/QacA family TERM 625 788932 - 788920 - G 83 -4.8 -5.09225 | opp_overlap 788928 ATGTGATTCAAAAAA CGCT GGGTG AGCG TGGCACTAAGTTTTG TERM 626 789175 - 789164 - G 74 -7.2 -4.43307 | overlap 789161 789166 GCGCGAAGAAAACAA GCGC GGCA GCGC CGATAGTCGTCAGAA AFE_0866 790023 - 790946 + | transcriptional regulator, LysR family AFE_0865 791209 - 790943 - | hypothetical protein AFE_0867 791496 - 791272 - | hypothetical protein AFE_0869 792363 - 792605 + | addiction module antitoxin, Axe family AFE_0870 792602 - 792865 + | addiction module toxin, Txe/YoeB family AFE_0871 793071 - 793475 + | heat shock protein, Hsp20 family lon-2 793472 - 795838 + | ATP-dependent protease La TERM 627 795909 - 795938 + T 95 -8.6 -4.91109 | opp_overlap 795912, overlap 795912 CCGTCGGGCACAAAT AAAGCACTTGGC CGTTAA GCCAGGTGCTTG TTTTTATGGTGCCGG TERM 628 795912 - 795935 + T 95 -10.3 -4.56153 | opp_overlap 795912, overlap 795909 TCGGGCACAAATAAA GCACTTGGC CGTTAA GCCAGGTGC TTGTTTTTATGGTGC TERM 629 795935 - 795912 - T 89 -8.8 -4.55295 | opp_overlap 795909 795912 TCGGGCACAAATAAA GCACTTGGCC GTTA AGCCAGGTGC TTGTTTTTATGGTGC AFE_0873 796250 - 795942 - | hypothetical protein TERM 630 796391 - 796370 - R 72 -3.7 -4.74801 | CAAGGCGATGAAAAA CATGCGAGA AAGT TCTTACATG AGCTGGAAATGTGAC TERM 631 796665 - 796648 - R 75 -6.3 -4.56597 | gap 1, overlap 796651 CTTCGTCGCGAAAAA GC-ACGAC ATA GTCGTCGC CCGCCAGCACCGCGA TERM 632 796764 - 796776 + r 90 -4.8 -5.40072 | opp_overlap 796756 AAATCCATGGAGAGC TGCC CTTCA GGCA TTTTTTTGACCCGCA AFE_0875 797583 - 797107 - | acetyltransferase, GNAT family TERM 633 797380 - 797361 - G 70 -3.4 -4.63527 | overlap 797364 CGAGCATGCGAAAAA GTAGCGCC TTAT GCCGCAAC TTCACACCGCGATCT AFE_0876 798466 - 797789 - | hypothetical protein AFE_0878 799364 - 798852 - | acetyltransferase, GNAT family TERM 634 799681 - 799706 + r 100 -3.9 -5.86976 | CAGAGGCGGCACAGC GTTTTGGCTGT TACC ACGGCCACCAC TTTTTTCTTTTGTGA AFE_0879 800627 - 799956 - | transcriptional regulator, LysR family TERM 635 801728 - 801744 + G 78 -13.7 -3.13504 | overlap 801726 801726 CAGTCATCAGCCCTC CAGCGCC GAG GGCGCTG TCATTTTCGTCAAAC AFE_0881 801528 - 802106 + | hypothetical protein TERM 636 802598 - 802582 - g 85 -6.5 -4.85599 | TCGACTGCACAAAAA CGATGAC CAT GTCGTCG TGGAAAGCGTCGCTG AFE_0882 802103 - 803266 + | flavin monoamine oxidase family protein AFE_0883 803263 - 803382 + | hypothetical protein AFE_0885 803820 - 803716 - | hypothetical protein TERM 637 803792 - 803780 - G 80 -3.3 -5.14563 | GCTGCTAGTAAAAAA CCCAC GGC GCAGG AAAGGGACCTTGGGA AFE_0888 804368 - 804661 + | hypothetical protein AFE_0887 804823 - 804656 - | hypothetical protein TERM 638 804831 - 804856 + H 71 -11.1 -3.00003 | opp_overlap 804797, overlap 804838 804844 TGACGCACCGTATCG GCCTGATGGCC GCGT GGCCTTTAGGC TACTTATTATGGTAC AFE_0889 804909 - 805163 + | stability protein StbD, putative AFE_0890 805153 - 805434 + | stability protein StbE, putative AFE_0892 807200 - 805977 - | hypothetical protein eiF2B 807355 - 808407 + | translation initiation factor, putative, aIF-2BI family TERM 639 809594 - 809579 - g 77 -11.8 -3.65046 | opp_overlap 809577 CTTCGAGCTGAAGAA GGCGCG CGAT CGCGCC CATATCCTGGAAGGC gyrA 808464 - 811001 + | DNA gyrase, A subunit serC 811009 - 812097 + | phosphoserine aminotransferase serA 812109 - 813692 + | D-3-phosphoglycerate dehydrogenase pheA 813689 - 814765 + | chorismate mutase/prephenate dehydratase TERM 640 815818 - 815833 + G 73 -4.6 -4.66318 | overlap 815808 TCAGTGTTGGCCTGC CGGTGG AAAA CCAACG TTTTCTTACAATGCT hisC-2 814767 - 815864 + | histidinol-phosphate aminotransferase AFE_0899 815869 - 816885 + | phospho-2-dehydro-3-deoxyheptonate aldolase TERM 641 817525 - 817548 + GF 73 -4.4 -4.58395 | overlap 817504 817528 CCCCGCTCTGCGGGA TCTCGCCGGC GGCG GTCTGCGTGA TTTTTCCCGGATAGC tyrA 816857 - 817762 + | prephenate dehydrogenase TERM 642 818146 - 818131 - g 72 -11.8 -3.30124 | opp_overlap 818130 818131 CGCCAGTTTGCAGAA GCGGCC CATG GGCCGC ATTCTGAACCCGTTG aroA 817766 - 819067 + | 3-phosphoshikimate 1-carboxyvinyltransferase TERM 643 819249 - 819233 - g 76 -9.4 -4.04576 | opp_overlap 819228 ATGCAGATAACGAAA CAGCCC TGTCC GGGCTG GCGCGTACCTTGCCG TERM 644 819374 - 819332 - g 73 -9.9 -3.57144 | gap 1, opp_overlap 819332 819350 819357, overlap 819333 TTGTGGATGCGGAAA TCCGCA-CCCCTGAAGTCAG CGCG CTGACCTCACGGATTGCGGC AATTCCTGCGGTTCG TERM 645 819373 - 819333 - g 73 -13.4 -2.74144 | gap 1, opp_overlap 819332 819350 819357, overlap 819332 TGTGGATGCGGAAAT CCGCA-CCCCTGAAGTCAG CGCG CTGACCTCACGGATTGCGG CAATTCCTGCGGTTC cmk 819064 - 819744 + | cytidylate kinase TERM 646 820123 - 820113 - g 70 -4.6 -4.56597 | CTCTCCCGTGAAAAA GCCC GCC GAGC CAAGACCTGGGTCGA rpsA 819822 - 821528 + | ribosomal protein S1 AFE_0904 821653 - 821549 - | hypothetical protein TERM 647 821580 - 821627 + g 78 -2.6 -5.1417 | gap 1, opp_overlap 821597, overlap 821584 AATATGGGTAACTGA GGTG-GCGTCAGGGAAAGGCTTT TTT GAAGCGTTAACCTGCCGCTTGCC TTTTTGATTTTATGA TERM 648 821919 - 821909 - g 71 -8.2 -4.07568 | opp_overlap 821909 821908 TCTGGTGCCTGAAAA GCGG GTT CCGC ATTTCAAGCCGGGCA ihfB 821685 - 821990 + | integration host factor, beta subunit TERM 649 822135 - 822178 + G 75 -3 -4.87665 | opp_overlap 822141, overlap 822136 AATTTACATTCAGGG ACTCAACCATCTCCTCAGTG AGCG CAATGATGAGGCGGTGGAGG TTTTTCTGGATGCCC TERM 650 822761 - 822774 + G 76 -5.3 -4.66264 | AGTCCGTAGTCCTGC TGGTT CTGG AACCA TTTTTGAGCGTTTTA TERM 651 822974 - 823008 + G 74 -11.4 -3.52906 | GGGTGATGCAGGTTC TGTTGGAACTGGATCC CGA GGCGCCAGATCCAACA TTGTATCCCGTTATG AFE_0906 822007 - 823161 + | hypothetical protein pyrF 823149 - 823880 + | orotidine 5`-phosphate decarboxylase pyrE 823965 - 824534 + | orotate phosphoribosyltransferase tig 824587 - 825891 + | trigger factor TERM 652 826047 - 826069 + G 100 -9.8 -4.91109 | CTATGACATTTACTC CCGTCTGCTC AAG GAGCGGGTGG TTTTTCTGGTGGGCC clpP 825937 - 826581 + | ATP-dependent Clp protease, proteolytic subunit ClpP clpX 826600 - 827871 + | ATP-dependent Clp protease, ATP-binding subunit ClpX TERM 653 828431 - 828420 - g 100 -2.2 -5.80364 | AGCTGAACAAAAAAA TCCC CCCG GAGA TTCTATCCACCCTGG TERM 654 829685 - 829672 - g 72 -2.3 -4.82901 | opp_overlap 829673 829679, overlap 829673 829674 CCTGCTCGACAAAAA GCGCA CGCG TGTGC AGGTTTCGGATCGCA lon-1 828005 - 830395 + | ATP-dependent protease La AFE_0913 830539 - 830411 - | hypothetical protein hup 830639 - 830911 + | DNA-binding protein HU TERM 655 831117 - 831098 - T 71 -10.6 -3.18681 | opp_overlap 831098 CGCCAATGCGAGTAA GGCGACCC TTTT GGGGCGCC TTTTTTTATGTCGGT TERM 656 831098 - 831117 + T 100 -10.6 -5.72616 | opp_overlap 831098 CGCCAATGCGAGTAA GGCGACCC TTTT GGGGCGCC TTTTTTTATGTCGGT AFE_0918 833437 - 832835 - | PAP2 family protein AFE_0919 834090 - 833449 - | hypothetical protein TERM 657 833671 - 833683 + g 72 -2.6 -4.83615 | CAGTTGCCGGGCTTC GGCC TGAAC GGTC TTTTTCTGGCCCGTA TERM 658 833921 - 833895 - G 93 -15.8 -3.45054 | CCTGATAACTGACAA CCGCGCCGATGG TGG CCAGCAGCGCGG TGAAGATGGCCACCC TERM 659 835416 - 835426 + G 81 -8.2 -4.61199 | overlap 835411 ACCTTCGGCCGCAAC GGGC CTT GCCC TTTTATCTGTCCGGT AFE_0920 834332 - 835702 + | metal ion transporter, NRAMP family AFE_0921 835713 - 835913 + | hypothetical protein TERM 660 836178 - 836191 + G 70 -4.5 -4.57569 | overlap 836171 AGTATCTCCTGCAAT CGGCA GTGT TGCTG TTTTTGGCAGGATCG TERM 661 836441 - 836464 + G 74 -3.2 -4.80167 | TGGCGTTGGATATTC TATATCAATG TGCC CATCGGTATA TTTTCCTTTTTCGTC TERM 662 836676 - 836712 + G 95 -5.1 -5.72207 | overlap 836677 GCGGATTTATACGGA TCGAGCGGCATCA TCCGGAACCTC TGTTGCCGCTCGC TTTTTTTCGTTTCAG TERM 663 836677 - 836711 + G 71 -8.6 -4.01698 | overlap 836676 CGGATTTATACGGAT CGAGCGGCATCA TCCGGAACCTC TGTTGCCGCTCG CTTTTTTTCGTTTCA AFE_0922 835910 - 837373 + | drug resistance transporter, EmrB/QacA family AFE_0923 838039 - 837374 - | hypothetical protein TERM 664 837480 - 837445 - G 76 -12.7 -3.28712 | gap 2, overlap 837446 CGCGTCGCTCGAGAA TGGTGGCGGGCAGACGG CCGC CCGCCTGCC-GCCAC-A GAACGGCCGCACGGA TERM 665 837480 - 837446 - G 76 -14.3 -2.57132 | gap 1, overlap 837445 GCGTCGCTCGAGAAT GGTGGCGGGCAGACGG CCGC CCGCCTGCC-GCCACA GAACGGCCGCACGGA TERM 666 837593 - 837552 - G 76 -10 -3.72576 | overlap 837589 GGGTCGCTCAGGAAA CGGCTCTCTCCGCTGACG ATGATG CGCGGGCGGAGAATGCCG ATGGCCTCGGTGTAC TERM 667 837697 - 837716 + g 70 -4.8 -4.56597 | CGACGCCTTCCTGGA CGCGCCGG GTGG CCGAGGCG TTTTTGAGGAGGCGC glnD 840668 - 838080 - | protein-P-II uridylyltransferase map 841480 - 840671 - | methionine aminopeptidase, type I sfsA 842197 - 841499 - | sugar fermentation stimulation protein TERM 668 841779 - 841795 + g 71 -6.5 -4.24204 | ATCACACCGTCTTCC TCCAGCA GGG TGCAGGA TTTTACCTCTACGTA AFE_0927 843098 - 842208 - | glutamyl-tRNA synthetase-related protein TERM 669 842536 - 842594 + g 73 -8.9 -3.85698 | gap 1, overlap 842537 TCGCCGCCGCGGATC -ACTTCGCTGATGCCCTGCTCTCCGTCG TCCA CGACAGAGGCCAGGATATAGGCGAAGTA TTTGTCGGCACGCAG TERM 670 842537 - 842592 + g 86 -14 -3.51934 | overlap 842536 CGCCGCCGCGGATCA CTTCGCTGATGCCCTGCTCTCCGTCG TCCA CGACAGAGGCCAGGATATAGGCGAAG TATTTGTCGGCACGC thiL 843160 - 844182 + | thiamine-monophosphate kinase pgpA 844172 - 844660 + | phosphatidylglycerophosphatase A TERM 671 845216 - 845204 - g 71 -6.3 -4.32201 | GCAATGAAGCGAAAA TTCAG TTG CTGAA GGTGCAGGAAGCGAC AFE_0930 844657 - 845502 + | CinA family protein AFE_0931 845555 - 845683 + | hypothetical protein TERM 672 845934 - 845948 + G 86 -12.8 -3.91897 | AGTTGTCAGGCTGCA GGCGGC ACC GCCGCC TTTATCGATGCCGAG TERM 673 846564 - 846535 - g 80 -3.6 -5.02476 | opp_overlap 846536, overlap 846536 846537 ACATCGTCGAAAAAA GC-GGCGCCTGGTA CAGT TACCAGG-GCGAGC GTATTGGTCAGGGCA recA 845676 - 846713 + | recA protein recX 846714 - 847166 + | regulatory protein RecX alaS 847236 - 849869 + | alanyl-tRNA synthetase AFE_0935 850471 - 849893 - | hypothetical protein hoxW 850986 - 850468 - | hydrogenase maturation protease TERM 674 850826 - 850800 - G 70 -10 -3.4252 | overlap 850801 TGGCATCCAGGAGAA TGGCCAGACGCG CGC CGCGCATGGCCG GGAGCAGGAGGCTGC TERM 675 850825 - 850801 - G 72 -13.5 -2.65298 | overlap 850800 GGCATCCAGGAGAAT GGCCAGACGCG CGC CGCGCATGGCC GGGAGCAGGAGGCTG hoxH 852251 - 850983 - | [NiFe] hydrogenase, alpha subunit, putative hoxY 853062 - 852265 - | [NiFe] hydrogenase, delta subunit, putative TERM 676 852301 - 852332 + g 74 -12.3 -3.13403 | gap 2, opp_overlap 852320, overlap 852299 CTGCTCCCGCCAATG GCGGCCAGCCTCGGC AAAG GCCGGGGC-G-CCGC TGTTGATGAAGAGGA hoxU 853897 - 853067 - | [NiFe] hydrogenase, gamma subunit, putative hoxF 854996 - 853890 - | [NiFe] hydrogenase, beta subunit, putative AFE_0941 856992 - 855073 - | murein transglycosylase, putative TERM 677 856657 - 856637 - G 73 -9.7 -3.889 | CGTAAGGAGATCAAA TCAGGAGGG CTG CCATCCTGA TACACTTGGGTGAAG AFE_0942 860551 - 857210 - | DNA helicase, SNF2/RAD54 family TERM 678 857264 - 857278 + g 75 -2.8 -4.89729 | overlap 857261 CAGGTCGTCGGGGCC GAAACG GAG CTTTTC TTTTTGCGTTTTCTC TERM 679 857306 - 857318 + g 77 -3.3 -4.91109 | opp_overlap 857301 CTCCAGCACACCTGC GGCGA GAA TGGCC TTTTTCTCCTGCAGG TERM 680 857325 - 857340 + g 91 -4.7 -5.4833 | opp_overlap 857301 AGAATGGCCTTTTTC TCCTG CAGGGC CAGGA TTTTTTCTTCAATGC TERM 681 857399 - 857386 - G 83 -2.3 -5.27335 | overlap 857380 GCTTGTAAACAAAAA CCTGA CGTT TCTGG CCGATGCGGTGGGCG TERM 682 858473 - 858483 + g 72 -2.4 -4.85782 | CAGGGCGGGATCCGT GAGG CGG CCAC TTTCTTTTTCCAGCA TERM 683 858649 - 858665 + g 80 -10.1 -4.07687 | CTGCGGGCAGTGGGA CGGAGGG GAT CTCTCCG TTTTGAGGCAAAGAT TERM 684 861591 - 861606 + G 88 -6.8 -5.0133 | opp_overlap 861588 AAGTAGCAACACGGC GCTGGA GTTG TCCGGC TTTTTTCCGGAAATC AFE_0943 860731 - 862182 + | phosphomannomutase, putative TERM 685 862189 - 862201 + G 93 -7.7 -5.0133 | overlap 862183 862180 CGGGCCTGAGCGGCG GATGC GGC GCATC TTTTTTCCGCGCATC TERM 686 862338 - 862299 - g 95 -15 -4.07568 | overlap 862303 GCGTGGTGTTCAAAA CCAATGCCGTGGCGGAAC TGGC GGTCCACCACGGCACCGA TGCCCAGGCGCAAAG TERM 687 862334 - 862303 - g 100 -16.6 -3.66908 | overlap 862299 GGTGTTCAAAACCAA TGCCGTGGCGGAAC TGGC GGTCCACCACGGCA CCGATGCCCAGGCGC AFE_0944 862166 - 862474 + | hypothetical protein AFE_0945 864079 - 862487 - | ABC transporter, ATP-binding protein AFE_0946 864369 - 864196 - | hypothetical protein TERM 688 864741 - 864765 + G 71 -6.3 -4.30576 | GTCGCGCCCGTCTGG CGGATGTCCGC ACG GCGGATCTGCG TTTTCATCATCGCCG thiC 864398 - 866281 + | thiamine biosynthesis protein ThiC AFE_0949 866771 - 866307 - | hypothetical protein TERM 689 866724 - 866708 - G 75 -2.3 -4.9218 | TATCGAGCAGAAAAA TTCCT CCAATCC AGGAA ACCACTGCGGTGATA AFE_0950 868023 - 866776 - | oxidoreductase, GMC family TERM 690 867013 - 867034 + g 90 -4.4 -5.44119 | GATGTCGGCAGCCAG TCCCATGC CGTTGC GCATGCGA TTTTTTTCGGCTGCG TERM 691 867497 - 867477 - G 73 -4.6 -4.59773 | opp_overlap 867490 867490 GCCCATTCTGAAAAA GCACCCTG TTCAC CTGGATGC CGGTTTCCAGTTCGG AFE_0951 869459 - 868053 - | aldehyde dehydrogenase (NAD) family protein TERM 692 868357 - 868341 - G 86 -13.7 -3.54488 | opp_overlap 868345, overlap 868339 CCGGTCGAAATAATA CAGCGCC AGA GGCGCTG GGTGATCGCGCACAT TERM 693 869497 - 869482 - R 100 -11.8 -5.1356 | CCTTATGAACAAAAA GGGGCC CGAA GGCCCC CGTGACGGTACCGCG TERM 694 869503 - 869525 + r 75 -6.9 -4.50976 | CGAAGGCCCCCGTGA CGGTACCGC GTTTA GCGGAATCG TTTTCTGGTGTACAG AFE_0952 869615 - 869514 - | hypothetical protein AFE_0953 869836 - 869633 - | hypothetical protein cydB 870982 - 869849 - | cytochrome d ubiquinol oxidase, subunit II TERM 695 870371 - 870341 - G 72 -13.3 -2.50195 | gap 1, opp_overlap 870341, overlap 870327 870323 870340 870338 870343 ACCGATGATGAAGAT CACCAGCGCC-GCG ATGC CGCCGACGCTGGCG TAATTCCGTGCCCGG TERM 696 871003 - 871022 + r 73 -10.7 -3.39895 | GCTCTCCATTCAGTC GGGGGGT AAATCA ACCCCCC TTGATTCATCACGCA cydA 872670 - 871042 - | cytochrome d ubiquinol oxidase, subunit I AFE_0956 873562 - 872687 - | metallo-beta-lactamase family protein AFE_0957 873727 - 875082 + | sigma-54 dependent transcriptional regulator TERM 697 875517 - 875548 + G 95 -19.5 -3.28712 | overlap 875519 CGTTGCGTGCCCGCG TGCCGGCGGCGAC GCCCGA GTCGCCGCCGGTA TTCTGGGCGCACGGG TERM 698 875519 - 875546 + G 95 -19.9 -3.21276 | overlap 875517 TTGCGTGCCCGCGTG CCGGCGGCGAC GCCCGA GTCGCCGCCGG TATTCTGGGCGCACG AFE_0959 875141 - 875722 + | phospholipase/carboxylesterase AFE_0958 877137 - 875719 - | pyridine nucleotide-disulfide oxidoreductase mdoG 877541 - 879085 + | periplasmic glucans biosynthesis protein, MdoG AFE_0961 879085 - 879588 + | hypothetical protein TERM 699 879984 - 879998 + G 75 -2.8 -4.87626 | opp_overlap 879974 879977 879976, overlap 879977 CAGAAGACCGGCGCG CTCG CCCATTT CGAG TTTTTCCTGTTGAGC TERM 700 880675 - 880693 + G 90 -4.4 -5.35224 | overlap 880676 880678 TGCTGGCAGGGGAGG GGCTGCGC CCG GCGCATCG TTTTCTTTTTGTCAA TERM 701 880729 - 880748 + G 78 -4.2 -4.77438 | gap 1, overlap 880726 880730 880733 CCATGTCTTTTTTGG CGGCGCCCT TGT GGGGC-CTG TTTTTGATCCTGGGT mdoH 879591 - 881669 + | periplasmic glucans biosynthesis protein MdoH AFE_0963 882704 - 881688 - | male sterility protein TERM 702 882195 - 882182 - G 78 -4.5 -4.72986 | overlap 882185 CACCCTCACCAAAAA TCACC GCTG GGCGA AAAGAAGTGGTTTTG TERM 703 882608 - 882626 + g 73 -8.8 -3.91897 | overlap 882593 CGCGGTTGCGCGTCA GGATGCGC ACG GCGTGTCC TTTCTGGCTCAACCG AFE_0964 882717 - 883280 + | hypothetical protein TERM 704 883593 - 883558 - g 93 -7.6 -5.0133 | CAGGTGGTGAAAAAA CTGGTAAAAGAACATG AAAC CATGGACTTTGACCAG GAAGTCATCGATGCG AFE_0965 883261 - 883668 + | hypothetical protein AFE_0966 885059 - 883707 - | hypothetical protein AFE_0967 888753 - 885340 - | type IV pilin biogenesis protein, putative TERM 705 885944 - 885956 + g 70 -3.3 -4.63486 | opp_overlap 885945, overlap 885945 CATGCCGACGAATAA TTGCC AAC GGCGG TTTTATTCACAAAAT TERM 706 888732 - 888742 + g 84 -3.2 -5.1963 | CACTGACAATGAATT TCTG ATG CGGA TTTTTATTCATTGCA AFE_0968 889337 - 888750 - | hypothetical protein TERM 707 888853 - 888873 + g 81 -6.1 -4.78572 | CGAATGCTTTGCACG CCAGGCC CAGTGCC GGTCTGG TTTTGTTCATTGCCA AFE_0969 890467 - 889334 - | type IV pilin, putative AFE_0970 890970 - 890470 - | type IV pilin, putative TERM 708 890891 - 890880 - G 76 -5.8 -4.67234 | overlap 890871 AGCCAATGGCAAAAA TCGC CAGG GCGA TCATGGTCTCGATGA AFE_0971 891521 - 890955 - | pilin signal sequence domain protein pilC 892770 - 891511 - | type IV pilus biogenesis protein PilC AFE_0973 893881 - 892877 - | type IV pilin biogenesis peptidase, putative TERM 709 893680 - 893702 + gH 70 -7 -4.10007 | overlap 893681 893697 TTTTCAGGGCTTTTT TGTCCAGC CGGTATT GCTGGACG TTTTCGCCCGATTGT AFE_0974 893861 - 893965 + | hypothetical protein TERM 710 893984 - 894003 + FH 74 -2.2 -5.0133 | gap 1 TTGCCGAGGTGCTTC CTTT-CATG ATC CATGTGAAG TTTTTTGCCAGCGTG moaD 893989 - 894231 + | molybdopterin converting factor, subunit 1 TERM 711 894211 - 894227 + F 84 -13.7 -3.15212 | overlap 894216 GAGGTGGCGTTTTTC CCACCGG TAA CCGGTGG TTAGCTGTGCTCGTT TERM 712 894637 - 894612 - g 77 -3.1 -5.00616 | overlap 894589 894614 894616 894617 894619 CCCTTCTGGAAAAAA GAGATCACCCC GGAG GGGGTGCGCTG GGTGACCGATTGTCC moaE 894234 - 894728 + | molybdopterin converting factor, subunit 2 AFE_0977 894735 - 895220 + | hypothetical protein AFE_0978 895238 - 895567 + | roadblock/LC7 domain protein TERM 713 896475 - 896512 + G 78 -2 -5.01732 | gap 2, opp_overlap 896475 896476, overlap 896477 CTATGTCGTCGAAAA TGCCGCT-G-GACAGCCT TGCG GGGTGGTCACCAGCGGTA TTTTTTCGCCCAGTT TERM 714 896656 - 896632 - g 77 -7.7 -4.36914 | GCGCTGGTGATAAAA CCGCCCTTCTG GCG CAACGGGGCGG CAACCTTTTCCTTTC gcvT 895573 - 896691 + | glycine cleavage system T protein gcvH 896688 - 897071 + | glycine cleavage system H protein TERM 715 897550 - 897572 + GF 72 -11.2 -3.02144 | opp_overlap 897550 CCTGGTGCCGGAGAA CCTGCTGCCG GGC TGGCGGCGGG TGTTGGACAGCGTGC TERM 716 898189 - 898210 + GF 72 -3.5 -4.69027 | overlap 898191 898191 GGGGGTGCCGGGGGT GAGCCTGCC TTAT GGCGGGGCC TTTTTCCATGAATTT gcvP 897077 - 898420 + | glycine dehydrogenase, decarboxylating AFE_0982 898342 - 899868 + | glycine dehydrogenase (decarboxylating), subunit 2 TERM 717 899895 - 899931 + T 72 -12.3 -2.78384 | GCCCCGTGCCCCTGG TCATCCGCCACGATC CGGCCGC GTTCGAGGCGGATGA TCTGATCGGCGAGGC AFE_0983 901561 - 899873 - | ABC transporter, ATP-binding protein, MsbA family AFE_0984 901881 - 901558 - | ferredoxin AFE_0985 902168 - 902770 + | antioxidant, AhpC/Tsa family TERM 718 902857 - 902831 - Tf 84 -9.3 -4.27316 | opp_overlap 902833, overlap 902832 GTGCCGAAGTGAAAA GGGCCCGGACG CCAGT CGTCCGGGCTT TTTTCCGGGCTTCAG TERM 719 902856 - 902832 - Tf 83 -12.8 -3.16068 | opp_overlap 902833, overlap 902831 TGCCGAAGTGAAAAG GGCCCGGACG CCAGT CGTCCGGGCT TTTTTCCGGGCTTCA TERM 720 902833 - 902855 + TF 100 -16.3 -5.03145 | opp_overlap 902832 902831 GCCGAAGTGAAAAGG GCCCGGACG CCAGT CGTCCGGGC TTTTTTCCGGGCTTC AFE_0986 903699 - 902869 - | hypothetical protein AFE_0987 903698 - 904558 + | hypothetical protein TERM 721 905227 - 905241 + G 71 -6.4 -4.15044 | overlap 905228 ACAAATATGGGGCAG TGATCG CGG CGATCG TTTATTGGCCGCCAG AFE_0988 904658 - 905698 + | hypothetical protein AFE_0989 906505 - 905813 - | hypothetical protein AFE_0990 906355 - 906747 + | hypothetical protein AFE_0991 906740 - 907507 + | tRNA (guanosine-2'-O-)-methyltransferase, putative AFE_0992 907532 - 908305 + | hydrolase, TatD family AFE_0993 908302 - 909060 + | metallo-beta-lactamase family protein AFE_0995 910280 - 909231 - | site-specific recombinase, phage integrase family TERM 722 909490 - 909503 + gT 83 -5.2 -5.10497 | overlap 909486 AAGTTTTCGATCCCT GCCC GTTCCA GGGC TTTTTTCCATGCCTT TERM 723 909934 - 909951 + gT 77 -3.3 -4.98531 | TAATGATTTGCGGTG GACGCTG ATGT CTGTGTC TTTTTGATTTGGAGA AFE_0996 910489 - 910130 - | DNA binding protein, excisionase family AFE_0997 910932 - 910510 - | hypothetical protein TERM 724 911036 - 911055 + r 77 -7.2 -4.26076 | gap 1 TGGTGAGAAGGATTT TCTTGCGGC AAG GCCG-AAGA TTTTGATAGGGATAA AFE_0998 912026 - 911295 - | transcriptional regulator, putative AFE_0999 912109 - 912318 + | prophage Afe01, transcriptional regulator, Cro family TERM 725 912686 - 912712 + F 71 -9.5 -3.53012 | gap 1, overlap 912687 TGGGGCTACGCTGAT TCCG-TCACTGG GGTT CCAGTGATCGGG TTTGAGAGCCCGAAA TERM 726 912744 - 912768 + F 84 -2.8 -5.38047 | gap 1, opp_overlap 912734, overlap 912733 912745 AATCAGGCGGACAGC CGCC-ATTCCC TTAC GGGAGTCGGCA TTTTTTATGTCCGTG TERM 727 913139 - 913117 - g 100 -14.2 -4.32034 | CGATGAGGACGAAAA GGGTCTGCAC ACT ATGCAGACCC TTGGCGGCAACCAGC AFE_1000 912929 - 913564 + | BRO family protein TERM 728 913810 - 913827 + G 71 -7 -4.20918 | opp_overlap 913810 ACGGCATTTTAACCA GCGAAC CAGTAT GTTCGC TTTCTTGGCCTTCGG AFE_1001 913773 - 914957 + | hypothetical protein TERM 729 915455 - 915439 - g 71 -6.5 -4.14392 | GGTGAACGGCGAAAA CGGATCC CAG GGATTCG CGCTGGAGCCCCCCG AFE_1002 914990 - 915688 + | hypothetical protein AFE_1003 915678 - 915878 + | hypothetical protein AFE_1004 915875 - 916090 + | hypothetical protein TERM 730 916118 - 916106 - f 76 -5.5 -4.7254 | AGTGTCGATCAAAAA GCCTC GGC AAGGC CCCAAATTTCGCCCA TERM 731 916687 - 916703 + G 89 -6.5 -5.04597 | overlap 916675 916688 ATCTTGCTGGGAACC CCGGGAA TGA TTCCCGC TTTTTATCTCTCCAT TERM 732 916688 - 916702 + G 73 -10 -3.61674 | overlap 916675 916687 TCTTGCTGGGAACCC CGGGAA TGA TTCCCG CTTTTTATCTCTCCA TERM 733 916785 - 916795 + G 89 -4.6 -5.27335 | CGTGGAAAATCCGAA CGCG CTG CGTG TTTTTGTTTCCGCGC AFE_1005 916204 - 916956 + | hypothetical protein AFE_1006 916983 - 917486 + | hypothetical protein AFE_1007 917483 - 918112 + | transglycosylase, putative TERM 734 918145 - 918134 - gf 77 -3.6 -4.98531 | TCCGGAAACTAAAAA CACG GAAG CGCG CGAAGAATATGCCCA AFE_1008 918078 - 918452 + | hypothetical protein TERM 735 918439 - 918427 - gf 70 -4.1 -4.59109 | overlap 918428 GAGACTCGGCAAAAA CCGTT TGC AACGA TCCAGAAAGATAGTA AFE_1009 918356 - 918514 + | hypothetical protein TERM 736 918698 - 918714 + G 74 -11.5 -3.52113 | overlap 918697 TTTGGTGGACGCTTG GCGCCGT CGT GCGGCGC TCTTTCTCCGGCGCT TERM 737 918725 - 918737 + G 71 -6.2 -4.40561 | GGCGCTCTTTCTCCG GCGC TGGTC GCGC TTCTTTTTCGGGGCC AFE_1010 918496 - 918792 + | hypothetical protein TERM 738 918895 - 918868 - g 89 -10.5 -4.60487 | TACGATTTTCAAAAA GGCCCGCACCC GGTATG GGGTGCCAGCC ATGGCCGTAGAACGG AFE_1011 918779 - 919054 + | hypothetical protein AFE_1012 919164 - 919439 + | hypothetical protein TERM 739 920390 - 920380 - g 72 -2.4 -4.77757 | GCTGAAAAAGGAAAA CCTG CCC CTGG TGGAGACCCCGCGCC TERM 740 921467 - 921422 - g 81 -4.5 -5.00616 | gap 1, overlap 921430 921431 921446 921447 TCCCTGGGCAAAAAA TGGGAAGACCGGGCACCGGCAC AAG GCGCCGCTTCC-GGCCCGGCCA GGAAAAATACCGGAT AFE_1013 919436 - 921553 + | DNA topoisomerase I, putative TERM 741 921757 - 921773 + G 70 -3.6 -4.62872 | overlap 921759 TCGAGGCCGTTCCCA TGCCGG AAATG CCGGGA TTTTTCAGAATTCCT TERM 742 921811 - 921800 - g 77 -3.6 -4.89477 | overlap 921795 TCCTGAACAAGAAAA CGGC GATT GCCA TTATCTGGGCAAGGA AFE_1014 921696 - 922022 + | hypothetical protein AFE_1015 922023 - 922373 + | hypothetical protein AFE_1016 922373 - 923242 + | lipoprotein, putative AFE_1017 923239 - 923397 + | hypothetical protein AFE_1018 923384 - 923932 + | thiol:disulfide interchange domain protein AFE_1019 924396 - 924286 - | hypothetical protein AFE_1020 924381 - 924656 + | hypothetical protein AFE_1021 924674 - 924922 + | hypothetical protein AFE_1022 924960 - 925817 + | patatin-like phospholipase family protein TERM 743 926848 - 926814 - g 72 -12 -3.37245 | overlap 926815 CCAGCGCAAGAGCAA CCGGGACGTGCGGGAG TTT CTGGCGCACGACCCGA AACGTCTGACCCGCA TERM 744 926847 - 926815 - g 72 -13.3 -2.62026 | overlap 926814 CAGCGCAAGAGCAAC CGGGACGTGCGGGAG TTT CTGGCGCACGACCCG AAACGTCTGACCCGC AFE_1023 926062 - 927426 + | HNH endonuclease domain protein TERM 745 927986 - 927974 - g 84 -10.5 -4.19817 | opp_overlap 927973 927976 GGCATCCATCTAAAA CCCGC ACA GCGGG CGTTGCTGTATCGGT AFE_1024 927479 - 928069 + | membrane-associated zinc metalloprotease, putative AFE_1025 928127 - 928570 + | hypothetical protein TERM 746 928617 - 928590 - T 71 -7.6 -4.05067 | gap 1, overlap 928591 928607 GATTGGACAAAAATA GTCCACGCGCCGC AAT ACGGCGTGCGG-C GTCCGCGAAACCAGG AFE_1026 928748 - 928656 - | hypothetical protein AFE_1027 928864 - 928715 - | hypothetical protein AFE_1028 928854 - 929747 + | hypothetical protein AFE_1029 929744 - 930427 + | hypothetical protein AFE_1030 930796 - 930584 - | hypothetical protein AFE_1031 931074 - 930796 - | hypothetical protein TERM 747 931342 - 931359 + G 85 -9.1 -4.59773 | CAGGACGGACGTTCT CCGCAGG CTAT TCTGCGG TTTTTCGGGCTCCCG TERM 748 931474 - 931496 + G 80 -4 -5.05601 | overlap 931481 GAGGAGTATCGCATC GACTGGTCCC GGC GCGACGGGTC TTTTTGTCTCTGGTA TERM 749 931607 - 931627 + G 71 -6.7 -4.19238 | opp_overlap 931607 CAGAGATACGCAATA GCCCGGTGC ATG GCTTTGGGC TTTTCGCCTTGAAAA TERM 750 931655 - 931645 - g 84 -5.4 -5.00616 | TTCGCCTTGAAAAAA TGGT ATC ACCA ACGTCGTCCGTTAAG AFE_1032 931090 - 931689 + | hypothetical protein AFE_1033 931727 - 932341 + | transposon, resolvase TERM 751 932873 - 932863 - g 75 -8.2 -4.2123 | GAGGCACCCAATAAA GCGC ACA GCGC AGAATTCCCTTACTG TERM 752 933723 - 933689 - g 85 -12.3 -3.72363 | gap 1, opp_overlap 933682 GATCGAAACGGCAAA TC-CTTCAGGCAACGG TTGG CCGTTTCCTGAAGCGA TGGACCGGGCGGTTG AFE_1034 932338 - 933843 + | transposon, transposase AFE_1035 933855 - 934244 + | hypothetical protein TERM 753 934570 - 934590 + G 84 -3.1 -5.26918 | overlap 934574 ACTTCTTCTCAGCCG CGCTTGGCG GCA CGCTATCCG TTTTTTCTCCGGTAT TERM 754 934992 - 935002 + G 85 -6.8 -4.85599 | opp_overlap 934992 CGGAGCGAGACCTAA CCGA CCT TCGG TTTTTCTCCGGTCGG AFE_1036 934313 - 935020 + | hypothetical protein csf4 937397 - 935088 - | CRISPR-associated DEAD/DEAH-box helicase Csf4 TERM 755 935742 - 935730 - Gf 72 -2.6 -4.77173 | opp_overlap 935731 GCGGGACAAAAGAAA CGCC GCTTT GGCA TTTGGAACATGCAGA TERM 756 936046 - 936062 + gF 78 -2.2 -5.07053 | overlap 936047 GCGGTTATGGCGTTA TCCAGA ATGAA TCTGGC TTTTTTGACATCCTT TERM 757 936850 - 936890 + gF 83 -9.7 -4.07687 | TGCAGATCTGGCCGC TCTTTGGCCATGGTCAGGG CGG CCATAATCATGGCCCGAGA TTTTCCAACGCCAGT TERM 758 937119 - 937103 - Gf 75 -6.5 -4.41348 | TTTGCTGGAAAGAAA GGCTCAA GCT TTGGGCC GCCTCTTCGATCTTG TERM 759 937459 - 937446 - gH 70 -9.5 -3.41878 | GGGCTGAAGCCAGAA GGCGC CTTG GCGCC GCATGAGGGCACCTG TERM 760 937647 - 937697 + GH 100 -17.6 -3.61398 | GCCAACGGGATCTTT TCCGAGGGCGGCGTCCAGCCGTTT GCC AAATGGGTGGACGTGGCCCGTGGA TTGTTGAACCCGCCG csf1 937392 - 938141 + | CRISPR-associated protein, Csf1 family csf2 938138 - 939199 + | CRISPR-associated protein, Csf2 family TERM 761 939388 - 939424 + G 72 -13.2 -2.52464 | gap 2, opp_overlap 939408, overlap 939398 GAGGGAGATTCCTGG GTCTGGC-A-GGCCTCCA GAA TGGAGGTCTTGGCCAGAC TCCCTTACCCGAAGA csf3 939196 - 939888 + | CRISPR-associated protein, Csf3 family TERM 762 939947 - 939930 - gf 71 -7.7 -4.0641 | gap 1, overlap 939932 CTGGACGGATAGAAA GACCGCCA TAA TGGCGG-C GAAGCGTTATCTGCG TERM 763 939946 - 939932 - gf 79 -11.4 -3.6269 | overlap 939930 GGACGGATAGAAAGA CCGCCA TAA TGGCGG CGAAGCGTTATCTGC TERM 764 939987 - 939969 - gf 77 -8.1 -4.08216 | TTATCTGCGGCAAAA GCGACAG GAGCG CTGCCGC GATAGAGGTCGGTGG AFE_1041 939901 - 940068 + | hypothetical protein AFE_1042 939999 - 940628 + | hypothetical protein TERM 765 940707 - 940722 + T 79 -3.2 -5.27938 | overlap 940690 940708 AAAAGCGAAGGTTTA TCGTCA GTTT TGGCGG TTTTTCTTTGCGAAT TERM 766 941504 - 941522 + T 100 -8 -5.26918 | opp_overlap 941503 941504, overlap 941503 TGTGCGGCTGGAAAG GCCCCTCC AGC GGGGCGGC TTTTTTGTGGGATGT TERM 767 942322 - 942281 - T 74 -10.7 -3.56568 | opp_overlap 942285, overlap 942285 GAAGTACGGGGCAAA GTCACGCGCCTTGCGGC TCGTGTAT GCCGCCAGGTGCGCGGC TGGAAAGGAACGTAT TERM 768 942370 - 942408 + T 91 -7.2 -4.85653 | opp_overlap 942360, overlap 942371 942372 CAAATCGGTATGCCG CTAGGCACGCGGCTGGGA AGT TCCGGGCCTCGTGCCCGA TTTCTTTTGTGTATG TERM 769 942371 - 942407 + T 74 -10.7 -3.49765 | opp_overlap 942360, overlap 942370 942372 AAATCGGTATGCCGC TAGGCACGCGGCTGGGA AGT TCCGGGCCTCGTGCCCG ATTTCTTTTGTGTAT TERM 770 942372 - 942406 + T 72 -12 -2.68232 | opp_overlap 942360, overlap 942371 942370 AATCGGTATGCCGCT AGGCACGCGGCTGGGA AGT TCCGGGCCTCGTGCCC GATTTCTTTTGTGTA AFE_1044 942924 - 942655 - | hypothetical protein AFE_1045 942952 - 943341 + | hypothetical protein AFE_1046 943345 - 943788 + | hypothetical protein TERM 771 944111 - 944099 - g 70 -4.7 -4.56597 | opp_overlap 944091 944088 GGTGTCCGCGAAAAA GCTGG TGG CCTGC TTCGGCGCTGGATTG AFE_1047 943788 - 945923 + | helicase, RecD/TraA family AFE_1048 946028 - 946726 + | hypothetical protein AFE_1049 946745 - 946987 + | lipoprotein, putative AFE_1050 947323 - 947030 - | hypothetical protein AFE_1051 947295 - 947564 + | hypothetical protein AFE_1052 947587 - 947796 + | hypothetical protein AFE_1053 947846 - 949570 + | hypothetical protein AFE_1054 949567 - 950457 + | hypothetical protein AFE_1055 950462 - 951001 + | hypothetical protein TERM 772 951444 - 951454 + G 81 -4.6 -5.0133 | CCGGAGGAGTCGTTG GGGC GCT GCTC TTTTTTGCAGGACTC AFE_1056 951321 - 951545 + | hypothetical protein TERM 773 951744 - 951729 - g 76 -5.4 -4.64766 | gap 1, overlap 951730 TCGAGATTGGAAAAA CGCCGCA GGA TGCG-CG CAGGCCGCAGTGAAG TERM 774 951991 - 951969 - g 74 -3.2 -4.82901 | overlap 951971 GGTGCTTCAGAAAAA CGGCGATCCC TCT GCGTTCGCGG GCCGGATCGAGTGCC AFE_1057 951571 - 953220 + | TPR domain/sulfotransferase domain protein AFE_1058 954608 - 953382 - | ISAfe8, transposase TERM 775 953777 - 953787 + g 85 -6.8 -4.78107 | GATCTTCCAGTACCA CCAC CGC GTGG TTTTTGCTGATGATG TERM 776 954998 - 954978 - g 70 -3.9 -4.58395 | GTCAGGGCGCAAAAA GCACCAC GGAGATA GCGGCGC GGATCGGCTTCCAAA AFE_1059 954716 - 955378 + | hypothetical protein AFE_1060 955400 - 955894 + | hypothetical protein AFE_1062 955905 - 956570 + | hypothetical protein AFE_1061 956898 - 956536 - | hypothetical protein AFE_1063 956877 - 957275 + | hypothetical protein TERM 777 957451 - 957430 - TR 90 -5.7 -5.20333 | TACGCATAAGAAAAA CCCCAAAGC CGAA GCGATGGGG TTGGGGTAGATCGGA AFE_1064 958138 - 957470 - | hypothetical protein TERM 778 958607 - 958627 + G 71 -8.9 -3.72576 | TTGGGTTTTTGCGCG CTGCCTGGC CCA GACGGGCAG TTTGCTCGCGGCGGC AFE_1065 958215 - 958805 + | conjugal transfer protein, putative TERM 779 958939 - 958951 + G 82 -9.1 -4.42976 | opp_overlap 958925, overlap 958926 TGTCCTTGCGATAGC CGTCG CGA CGACG TTTATTGGTTTGTGC TERM 780 959142 - 959152 + G 71 -6.8 -4.1899 | opp_overlap 959122 959136 959135 CGCCCAAACCGGCGG GACC GAA GGTC TTTTCGGTGCAGTGG TERM 781 959844 - 959833 - g 80 -3.6 -5.01535 | GCAGAACCAGAAAAA CGCG AACC CGCA GACCATTACGCAGTA AFE_1066 958886 - 959899 + | pilus assembly protein TraF, putative TERM 782 961139 - 961127 - g 81 -6.2 -4.83169 | opp_overlap 961126 ATGTCGGGATAAAAA CCGC TGTGC GCGG ATATCTGTTGGGCGG TERM 783 961534 - 961518 - g 75 -2.1 -4.98255 | overlap 961520 GCTGAACGACAAAAA CGTGCGC CTG GCGGAAG AGTTGGTGCAAAGCG AFE_1067 959911 - 961590 + | pilus assembly protein TraH, putative AFE_1068 961593 - 965249 + | pilus assembly protein TraG, putative AFE_1069 965317 - 965826 + | hypothetical protein TERM 784 965859 - 965871 + TF 75 -6.2 -4.56597 | opp_overlap 965859 TTTTTGCATCGAGAA GCGG GTTCG CCGC TTTTTAGCAGCACGG TERM 785 965896 - 965914 + TF 70 -3 -4.7339 | GCACGGTGGAGTTTG CCGCGC GGAAGAG GAGCGG TTTTTCCGGTTTCTT AFE_1070 966292 - 966017 - | DNA-binding protein, HU family AFE_1071 966291 - 966830 + | hypothetical protein AFE_1072 966834 - 967562 + | hypothetical protein AFE_1073 967633 - 968574 + | BRO family protein AFE_1074 968571 - 968825 + | hypothetical protein AFE_1075 968890 - 970008 + | hypothetical protein AFE_1076 970041 - 970391 + | hypothetical protein AFE_1077 970391 - 971269 + | hypothetical protein traL 971257 - 971535 + | type IV conjugative transfer system protein TraL TERM 786 971883 - 971905 + G 71 -7.6 -4.07885 | opp_overlap 971882, overlap 971896 AGCGCGGCTGAAGAG GCCAACGCGG ATG CCACGTTCGC TTTTGAGGCGAAGTC traE 971532 - 972146 + | type IV conjugative transfer system protein TraE TERM 787 972173 - 972194 + G 74 -6.5 -4.39998 | gap 1, overlap 972174 GTAGTCATCGCGTTG TGCGGG-GCC CTG GGCGCCTGCG TTTCTTCTCTGGCTG TERM 788 973057 - 973081 + G 74 -11.3 -3.42574 | opp_overlap 973036 973052, overlap 973058 GTCGCATAAGCGGCT GGCGTTGCCGG GGC CCGGCGGCGCG TTCTCCTGGACTTGG TERM 789 973058 - 973080 + G 76 -14.8 -2.65223 | opp_overlap 973036 973052, overlap 973057 TCGCATAAGCGGCTG GCGTTGCCGG GGC CCGGCGGCGC GTTCTCCTGGACTTG traK 972143 - 973315 + | TraK lipoprotein, putative TERM 790 974091 - 974070 - g 80 -3.6 -5.1356 | GGTCAGCAATAAAAA GACGGGCA TCTATC TGCCGGCC TCCACCATCCTAACG TERM 791 974212 - 974193 - g 80 -3.5 -5.1356 | TCGTATCAAGAAAAA GGCCATC CTGCCC AACGGCC TGCGCATCAATCTGG TERM 792 974785 - 974771 - g 74 -12.8 -3.18023 | overlap 974769 CCAGCATCAGCAACA GCCCGC AGG GCGGGC CCGCGCTAACCCCTG AFE_1081 973312 - 974943 + | conjugal transfer protein, putative traV 974940 - 975437 + | conjugal transfer protein TraV, putative traA 975473 - 975880 + | conjugal transfer protein TraA, putative AFE_1083 976389 - 975850 - | hypothetical protein TERM 793 975921 - 975894 - G 100 -21.4 -3.15212 | AAGCACCAGAGCTAA GTCCACCACGGC TTGT GCCGTGGTGGAC CACATCAGGCACATC TERM 794 976387 - 976419 + g 100 -17.9 -3.68351 | opp_overlap 976391 976392, overlap 976393 TCCCATTCGGGATGG CAAAGGGCCACGGAA TTT TTCCGTGGCTTTTTG TTTGCCTCCTGGACA TERM 795 976414 - 976392 - H 72 -12 -2.75844 | opp_overlap 976387 976393, overlap 976391 TTCGGGATGGCAAAG GGCCACGGAA TTT TTCCGTGGCT TTTTGTTTGCCTCCT TERM 796 976393 - 976413 + H 100 -15.5 -5.30616 | opp_overlap 976392 976391, overlap 976387 TCGGGATGGCAAAGG GCCACGGAA TTT TTCCGTGGC TTTTTGTTTGCCTCC AFE_1085 976486 - 977310 + | thiol:disulfide interchange domain protein AFE_1086 977363 - 978286 + | hypothetical protein TERM 797 978388 - 978406 + F 100 -10.2 -5.87996 | TGCGGTGCGGTTATT GGCTTGGG TAT CCCGGGCC TTTTTTTGTTGCTTG TERM 798 979627 - 979610 - g 81 -5.5 -4.77165 | TGCTGCAGAAGAAAA CCAACTC CCGT GCGTTGG TGGAGGGATTGTCGG AFE_1087 978463 - 979653 + | type II/IV secretion system protein AFE_1088 979643 - 980407 + | thiol:disulfide interchange protein, DsbA family TERM 799 980438 - 980459 + G 71 -6.5 -4.19336 | gap 1, overlap 980455 AGTTGTTCCGTGTGA TCCACAGGGC GCG GCCCCG-GGA TTTCTTCCCGTGGTT traC 980404 - 983004 + | type-IV secretion system protein TraC AFE_1090 983004 - 983498 + | hypothetical protein AFE_1091 983458 - 984012 + | conjugation signal peptidase TraF, putative TERM 800 984107 - 984121 + TF 80 -9.2 -4.07568 | overlap 984099 AAGGTTGGTCGCAGG GCGGCC TGG GGCTGC TTTTGACCGCGAGCG AFE_1092 985194 - 984901 - | hypothetical protein AFE_1093 984124 - 985092 + | hypothetical protein AFE_1094 985277 - 985909 + | hypothetical protein AFE_1095 985906 - 987174 + | pilus assembly protein TraW, putative AFE_1096 987452 - 988702 + | conjugal transfer protein TraU, putative TERM 801 988819 - 988801 - g 88 -13.8 -3.60098 | opp_overlap 988805 988806 ATGGGGCACCCCAAA CGCCAGCG CCG CGCCGGCG CGTTGTTCATCGCCT TERM 802 988805 - 988821 + G 71 -9.3 -3.7282 | opp_overlap 988801, overlap 988806 GGCACCCCAAACGCC AGCGCCG CGC CGGCGCG TTGTTCATCGCCTGG TERM 803 989096 - 989110 + G 75 -8.5 -4.21194 | overlap 989094 TCAATCAGGCCAGCG CCGCC AACAC GGCGG TTTTGAGTGATCCGA TERM 804 989225 - 989203 - g 72 -14.2 -2.61264 | overlap 989202 989212 GCCTCCACCCAGAAC GCCTGCAAAG GCC CCTTGCAGGC CGCAGCGACCTCCCT TERM 805 989827 - 989849 + G 71 -6.3 -4.36914 | opp_overlap 989814 989826 AATCCGGCGAATCAG GGCATGATC AACCA GATGATGCC TTTTATCGAGAGCAA AFE_1097 988768 - 991827 + | conjugal transfer protein TraN, putative AFE_1098 991885 - 992124 + | pemI family protein TERM 806 992213 - 992201 - g 89 -10.5 -4.71426 | opp_overlap 992200 992199 TGGTCACGAACAAAA GGGCC ACC GGCCC GCTTTGGTGCTGACA chpA 992124 - 992465 + | ChpA protein AFE_1100 992568 - 993596 + | hypothetical protein AFE_1101 993708 - 993800 + | hypothetical protein AFE_1102 993850 - 994122 + | hypothetical protein AFE_1103 994216 - 995241 + | hypothetical protein TERM 807 995923 - 995880 - g 76 -8.9 -4.1021 | TTCCAGAACTACAAA CTGGTGG-CGGTGCGAACCTG CCAT CAA-TACGCACCGACCTCCAG CGAGTGCCAGACGCC AFE_1104 995241 - 996518 + | conserved domain protein, putative TERM 808 996507 - 996497 - f 70 -6.8 -4.10925 | ATATACCCCGCAAAA CTGC GCC GCAG GAGGGTGCTGATGGG TERM 809 996709 - 996690 - g 78 -6.4 -4.59853 | gap 1, opp_overlap 996700 996701 996702 GGAATGGTTCAAAAA CGGG-ACCA TGC CGGTGCCCG TGCGCCAGTTATCGA AFE_1105 996622 - 997212 + | transposon, resolvase TERM 810 998772 - 998754 - g 78 -10.2 -3.85567 | AACCGCAAACTCAAA GCGGCGCT TGC AGCGCAGC GCGAGGCGAGAAAAC AFE_1106 997209 - 998858 + | transposon, transposase AFE_1107 999219 - 999761 + | hypothetical protein AFE_1108 999791 - 1000096 + | hypothetical protein AFE_1109 1000305 - 1000982 + | hypothetical protein AFE_1110 1002294 - 1001068 - | ISAfe3, transposase AFE_1111 1002336 - 1002755 + | hypothetical protein AFE_1112 1002755 - 1003066 + | hypothetical protein AFE_1113 1003063 - 1003296 + | hypothetical protein TERM 811 1004288 - 1004301 + G 73 -9.5 -3.90922 | CGGCCTACATCCACG GCCCC ATGG GGGGC TTGTTTGCAACGCAT TERM 812 1004342 - 1004331 - g 71 -7.2 -4.28254 | overlap 1004332 TCCCAACATGGAAAA GCGG ATCG CCGC AATCCGGGCGCTGTG htpX-1 1003537 - 1004358 + | heat shock protein HtpX TERM 813 1004381 - 1004396 + F 100 -11.8 -4.60797 | opp_overlap 1004379 1004380 TCCGATCCGGAAACC GCCGCC TTCG GGCGGC TTTTCTGTCTCAAAG AFE_1115 1004470 - 1005354 + | Ser/Thr protein phosphatase family protein AFE_1116 1005351 - 1005590 + | hypothetical protein TERM 814 1005883 - 1005901 + G 71 -8.9 -3.78015 | TATTCAATTTTTACC TCCCTGT TTGTT ACAGGGA TTGTGCTTTTTGGTT AFE_1117 1005805 - 1006014 + | hypothetical protein AFE_1118 1006007 - 1006258 + | hypothetical protein AFE_1119 1006239 - 1006487 + | hypothetical protein AFE_1120 1006534 - 1007487 + | hypothetical protein AFE_1121 1007484 - 1008092 + | hypothetical protein AFE_1122 1008142 - 1008399 + | hypothetical protein TERM 815 1008736 - 1008725 - Tf 81 -3.6 -5.16237 | AATTTCAGCAAAAAA GCCA ACTA CGGC CGATTTGGATTGTTT AFE_1123 1009240 - 1008704 - | hypothetical protein AFE_1124 1009216 - 1009458 + | hypothetical protein AFE_1125 1009464 - 1009790 + | hypothetical protein AFE_1126 1009811 - 1010182 + | hypothetical protein TERM 816 1010718 - 1010701 - g 88 -3.4 -5.45726 | overlap 1010703 GAGAGGCGAAAAAAA CACAGC AAGAAA GCTGTA TCGGTTGATTAATAA AFE_1127 1010179 - 1010730 + | nucleoside 2-deoxyribosyltransferase family protein AFE_1128 1010761 - 1011288 + | hypothetical protein AFE_1129 1011311 - 1011439 + | lipoprotein, putative AFE_1130 1011478 - 1011603 + | hypothetical protein TERM 817 1011691 - 1011664 - f 86 -12.7 -3.64703 | GTCTTCGCAGGGAAA GGGATGCGCCA ACCGGG CGGCGCACCCC AGCAAAGAGCGCACC TERM 818 1012265 - 1012284 + G 78 -2.1 -5.03314 | gap 1, overlap 1012266 GCGCATACACGAGGA TGGC-GAC GGTTG GTCTGCCG TTTTTTGCCGCTGGC AFE_1131 1012107 - 1012523 + | hypothetical protein AFE_1132 1013496 - 1013038 - | hypothetical protein AFE_1133 1012629 - 1013108 + | hypothetical protein TERM 819 1013376 - 1013358 - GTf 85 -6.7 -4.83615 | GATGCGCGACAAAAA CCCCACT GAAAT AGTGGAG GTGTACGGGAGCGAT TERM 820 1013456 - 1013467 + gTF 71 -5.8 -4.35958 | GGGAAGTAAAGCAGC CGGT ATAA ACCG TTATTTCTTTGATCA AFE_1134 1014079 - 1013972 - | hypothetical protein AFE_1135 1014070 - 1014771 + | hypothetical protein TERM 821 1014879 - 1014907 + G 78 -6.5 -4.63218 | overlap 1014884 GGGGTAATCTTTGCG CCGGGGGAGGCGA TGG TGGTCGCCGCCGG TTTTCTTGCGGCCAA AFE_1136 1014753 - 1015283 + | membrane protein, DedA family TERM 822 1015603 - 1015619 + G 73 -5.1 -4.58395 | GGCCAGCACCTTTCA TGCGTTT TGT GGACGCA TTTTTCGACAATACG TERM 823 1017362 - 1017385 + G 72 -3 -4.74706 | gap 1, overlap 1017364 1017368 ATCAGCTATGTGGCT CTGACGCGGGC CAA GCAC-CGTCTG TTTTTGCATGTTCCA AFE_1137 1015352 - 1017589 + | ATP-dependent DNA helicase, UvrD/REP family AFE_1138 1017579 - 1017854 + | hypothetical protein TERM 824 1017966 - 1017940 - gT 83 -12.2 -3.64703 | TGTCCTGCATCCAAA GCCCCGCCATGA TGG CCAAGGCGAGGC GGATCATCCAGGCCA AFE_1139 1018246 - 1018070 - | hypothetical protein AFE_1140 1017855 - 1018163 + | hypothetical protein AFE_1141 1018220 - 1019098 + | hypothetical protein AFE_1142 1019378 - 1020604 + | ISAfe3, transposase AFE_1143 1021214 - 1020609 - | hypothetical protein TERM 825 1021235 - 1021255 + H 100 -14 -5.24531 | CGATCGGCCCATGCG CCCCAGGG AGTCC CCCTGGGG TTTTTTGTGGGCGGT TERM 826 1021372 - 1021393 + H 70 -5 -4.39386 | overlap 1021374 TGGCCTTACGACGGC GAGGGCGG GAAAAA CCGTCCGC TTTTGGTGCTTTGGC AFE_1144 1021715 - 1021924 + | dihydroorotate dehydrogenase domain protein, putative TERM 827 1021935 - 1021956 + T 100 -5.7 -5.45802 | opp_overlap 1021930 1021935 TCTGACCAAACCCAA CCCCTTGTC TTCG GACTTGGGG TTTTTCTTTTGGGCA TERM 828 1022142 - 1022165 + T 72 -11.8 -2.75535 | overlap 1022142 GTCCCAGCGGCTATC CCAGCAAGTG CAGG TACTTGCTGG TCGTTCCGATGTTGC AFE_1145 1023042 - 1022137 - | tyrosine recombinase, phage integrase family TERM 829 1022798 - 1022787 - G 78 -7.2 -4.65916 | opp_overlap 1022794 GGTAGTCGAAGAAAA GCGC TAAC GCGC CTGTGCGTACGTTCT AFE_1146 1023249 - 1023611 + | hypothetical protein TERM 830 1023650 - 1023639 - g 85 -2.2 -5.36364 | overlap 1023641 TGAAAAAGACAAAAA CAGG CGCT CCTA CGAGGAAGCCGTCCC AFE_1147 1023623 - 1023889 + | hypothetical protein AFE_1148 1023901 - 1024455 + | hypothetical protein TERM 831 1024613 - 1024594 - T 100 -9.2 -4.96848 | CTGGGCATAGAAAAA CCCCAGGC CGAA GCTTGGGG TTGGGGGGGCAAGAT AFE_1149 1025079 - 1024642 - | hypothetical protein TERM 832 1025185 - 1025163 - R 100 -13.4 -5.27335 | opp_overlap 1025163 1025184 CCGCTCAAAGAAAAA CCCCGGTGCA AGT TGCACTGGGG TTGGTGGGATCAGCC TERM 833 1025163 - 1025185 + r 100 -15.6 -3.16564 | opp_overlap 1025163, overlap 1025184 CCGCTCAAAGAAAAA CCCCGGTGCA AGT TGCACTGGGG TTGGTGGGATCAGCC AFE_1150 1025762 - 1025220 - | hypothetical protein AFE_1151 1025867 - 1025772 - | hypothetical protein TERM 834 1025898 - 1025875 - R 100 -11 -5.1861 | CGCACCACTAAAAAA CCGCCTTCCC CGAA GGAAAGACGG CTAGAGAACTAAGCA AFE_1152 1026452 - 1025907 - | HNH endonuclease domain protein AFE_1153 1026725 - 1026498 - | hypothetical protein AFE_1154 1027123 - 1026725 - | hypothetical protein TERM 835 1027834 - 1027868 + r 86 -11.7 -3.91858 | opp_overlap 1027830 1027829, overlap 1027829 1027860 GCATGATAAACGCTG TTTTCTATACACATC TGCCT GACGTGTATAGAAAA TTCTGTATTTTTATG TERM 836 1029118 - 1029146 + r 86 -14.7 -2.98823 | AGCTAATTGTCCGGT TTTTGAGGTCGCG AAA TGCGACCTCAAAG TCTCTATCCCCGCCA AFE_1169 1029401 - 1029150 - | hypothetical protein AFE_1170 1029474 - 1029983 + | hypothetical protein AFE_1174 1030520 - 1030242 - | hypothetical protein TERM 837 1030671 - 1030632 - R 95 -15.1 -3.53012 | opp_overlap 1030634 1030638, overlap 1030641 CGGCGTGTTTTGAAA GAGCAACAAGGGAAGCC ATTGAA GGCTTTCCATGTTGCTC TCTGCCGCCATTCTG TERM 838 1030634 - 1030669 + r 86 -14.1 -2.87881 | opp_overlap 1030632 1030641, overlap 1030638 GCGTGTTTTGAAAGA GCAACAAGGGAAGCC ATTGAA GGCTTTCCATGTTGC TCTCTGCCGCCATTC AFE_1176 1031396 - 1031115 - | hypothetical protein AFE_1178 1032673 - 1031930 - | hypothetical protein TERM 839 1032247 - 1032216 - G 71 -8.1 -4.13767 | gap 1, opp_overlap 1032227, overlap 1032220 TTGGTGATGTGAAAA TCCAGATACCGGTC TGCGG GACTGGTATC-GGA GTACAGGGTGTATCC TERM 840 1032419 - 1032407 - G 71 -5.5 -4.3208 | overlap 1032409 TGCTATAACGGAAAA TACGG CTC CCGCA AGGAACAGCCAAAGC TERM 841 1033188 - 1033174 - RH 74 -4.2 -4.70583 | overlap 1033175 CCCAGTAAGACAAAA TTGGTG GAG CACCAC GGAATCGAACCGCGC TERM 842 1033664 - 1033623 - RH 83 -7.3 -4.59853 | gap 1, overlap 1033625 1033626 CCAACCTTCCAAAAA TAGGCTGGTGACGCCATGGA TGA TCCATGACGGCACCGGA-TA CCCGGTCTACGCATG TERM 843 1033663 - 1033625 - RH 71 -8 -3.91164 | overlap 1033623 1033626 AACCTTCCAAAAATA GGCTGGTGACGCCATGGA TGA TCCATGACGGCACCGGAT ACCCGGTCTACGCAT TERM 844 1033662 - 1033626 - RH 71 -11.5 -2.93975 | overlap 1033625 1033623 ACCTTCCAAAAATAG GCTGGTGACGCCATGGA TGA TCCATGACGGCACCGGA TACCCGGTCTACGCA TERM 845 1034206 - 1034218 + rH 84 -6.2 -5.06414 | overlap 1034205 CAGATTAGGCCACAC CCCG AAGCG CGGG TTTTTATTCGGCGAA TERM 846 1036065 - 1036023 - RH 83 -12.1 -3.68351 | opp_overlap 1036044 TCGGCATTATGCAAA CGCACACCGCAACCTAC CTGAGCACC GTAGGTTCTGGTGTGCG CCCATCATGACGATG TERM 847 1036136 - 1036165 + rH 100 -14.4 -3.88946 | gap 1, opp_overlap 1036136, overlap 1036136 ACCGACAAAACAAAA CCGGCAGCCT-GT TTTTC ACGAGGCTGCCGG TTCTTGTATCCGGTG TERM 848 1036165 - 1036136 - RH 100 -14.4 -5.19275 | gap 1, opp_overlap 1036136 1036136 ACCGACAAAACAAAA CCGGCAGCCT-GT TTTTC ACGAGGCTGCCGG TTCTTGTATCCGGTG AFE_1195 1036385 - 1036224 - | hypothetical protein AFE_1196 1036357 - 1036500 + | hypothetical protein AFE_1197 1037418 - 1036579 - | hypothetical protein TERM 849 1036983 - 1036973 - G 71 -8.2 -4.07885 | overlap 1036960 1036957 CAGCCCGCCTCAAAA GCGG AAT CCGC GCCGACCGCGCCGCC AFE_1198 1037916 - 1037647 - | hypothetical protein rnhA-1 1038350 - 1037913 - | ribonuclease HI AFE_1200 1038994 - 1038371 - | hypothetical protein TERM 850 1039790 - 1039765 - g 78 -4.5 -4.73613 | overlap 1039769 TTACTATCAAGAAAA GGCACGCCTGC TGTT GCGGGCACTCC CGTCCCATCCCGCAA tnsA-1 1039166 - 1039996 + | Tn5468, transposase protein A TERM 851 1042010 - 1041990 - g 71 -5.4 -4.29738 | overlap 1041992 GGAGAGTCAGGAAAA CAGAAAGC GGGAG GCTTTCAG GATGCTTCCTCCCAG TERM 852 1042098 - 1042075 - g 80 -3.8 -5.07652 | gap 1, overlap 1042077 TTTCCCAAAACAAAA GAGGCCGACGA TTA TCGTCT-CCCC GGGATAGCGGATATT tnsB-1 1039993 - 1042161 + | Tn5468, transposase protein B tnsC-1 1042142 - 1043800 + | Tn5468, transposition protein C TERM 853 1043819 - 1043805 - f 73 -5.6 -4.62783 | opp_overlap 1043804 1043805 TAGCGAGCTGAAAAA GCCACC CGT GTTGGC CTATTTCCCGGAAAT TERM 854 1044729 - 1044709 - g 91 -13.9 -3.85817 | ATTTTTCTGGACAAA CGGTCGCCG CAA CGGCGGCCG GCAACCCCCTTCGGC tnsD-1 1043812 - 1045641 + | Tn5468, transposition protein D AFE_1205 1045661 - 1047328 + | Tn5468, orf5 AFE_1206 1050838 - 1047410 - | hypothetical protein TERM 855 1048358 - 1048369 + g 72 -2.2 -4.74706 | AGTAGCGTTCTCGAG GCAT GTAA GTGC TTTTTCACTGTTGGC TERM 856 1050008 - 1050019 + g 83 -4.4 -5.03994 | overlap 1050003 GGCAATTTGATGTGC TACC GCAT GGTA TTTTTGTATATGCGC AFE_1207 1051005 - 1050913 - | hypothetical protein TERM 857 1051210 - 1051182 - g 76 -10.1 -3.78934 | overlap 1051183 1051185 GGCGGTGGATAAGAA TCAGGTGCCGGCC CTG GGCCTGCTCCTGC GACAGATTCTGGCCG TERM 858 1051209 - 1051183 - g 75 -13.6 -2.87146 | overlap 1051182 1051185 GCGGTGGATAAGAAT CAGGTGCCGGCC CTG GGCCTGCTCCTG CGACAGATTCTGGCC AFE_1208 1051042 - 1054017 + | outer membrane autotransporter TapA TERM 859 1054034 - 1054063 + F 100 -12.1 -4.91459 | GATCTGACTCGGACG CTGGGACGGTTCC GATA GGTGCCGTTCCAG TTTTTGTGAATCTTG TERM 860 1054801 - 1054822 + GF 72 -2.1 -4.82901 | GTCCGAATGCTGGTG GTGGTGCTC AGGG GGGCGCGGC TTTTTATGGGAGCGG TERM 861 1060539 - 1060502 - gf 70 -9.1 -3.65314 | gap 1 CGGAATTGTCAATAA CGCCGGCAGGATAG-GCA GTC TGAACAATGCTGCCGGCG GAACTATCAGTGGTG AFE_1209 1054149 - 1064603 + | outer membrane autotransporter, putative TERM 862 1064654 - 1064674 + GF 77 -8.2 -4.18018 | overlap 1064655 1064667 GGTATCGGTGTCTTC TGCCTGGC CCCGT GCCGGGCG TTTTCCATGGGGGAG AFE_1210 1064536 - 1065282 + | oxidoreductase, 2OG-Fe(II) oxygenase family TERM 863 1067020 - 1067005 - g 74 -3.2 -4.8048 | CTGTTACAGCAAAAA CTTCTC TGGG GAGCAG CGCTTTTCGTACGAT AFE_1211 1065275 - 1067362 + | TPR domain/sulfotransferase domain protein AFE_1212 1067359 - 1068516 + | hypothetical protein TERM 864 1068605 - 1068636 + T 70 -3.1 -4.72272 | opp_overlap 1068605 1068635 CTCAGCACGAAATGA TGTGTTCTGTT TATTGGTCGC AACAGATCACA TTTTTAATGGCAAAC TERM 865 1069196 - 1069210 + T 100 -12.8 -5.36441 | AGTTTAGACACTCAG CCCGGC TTC GCCGGG TTTTTTATCTCAGAA AFE_1213 1069338 - 1069192 - | hypothetical protein TERM 866 1069258 - 1069279 + g 71 -5.7 -4.39386 | opp_overlap 1069258, overlap 1069251 GCAATGGCCGGTAAA CACCCCGTC GGCA GCCAGGGTG TTTTCGTAATTTGAG AFE_1214 1070398 - 1069934 - | hypothetical protein AFE_1215 1071726 - 1070500 - | ISAfe8, transposase TERM 867 1070895 - 1070905 + g 85 -6.8 -4.78107 | GATCTTCCAGTACCA CCAC CGC GTGG TTTTTGCTGATGATG AFE_1216 1072161 - 1071811 - | hypothetical protein AFE_1217 1072804 - 1072193 - | uracil-DNA glycosylase, family 4 AFE_1218 1073520 - 1072804 - | hypothetical protein TERM 868 1073740 - 1073729 - R 78 -5.8 -4.83169 | opp_overlap 1073728 1073729 1073731, overlap 1073731 ACTGCTTCACAAAAA CTGG AATG CCAG ATCTTTGGCATTGCT AFE_1220 1075369 - 1074584 - | hypothetical protein AFE_1221 1076006 - 1075392 - | modification methylase, putative TERM 869 1076112 - 1076124 + H 95 -6.3 -5.30348 | overlap 1076090 GTAAAAACTTCATCG TTCCA TGA TGGAA TTTTTATTGTTGCGT AFE_1222 1076212 - 1076925 + | hypothetical protein TERM 870 1076947 - 1076963 + GT 100 -13.7 -4.81551 | opp_overlap 1076947 ACATGCCAAGAAAAA GGCGCCA GGG TGGCGCC TTTTTGCTGTCCGTA TERM 871 1076963 - 1076947 - gT 100 -13.7 -5.09204 | opp_overlap 1076947 ACATGCCAAGAAAAA GGCGCCA GGG TGGCGCC TTTTTGCTGTCCGTA AFE_1223 1077580 - 1076987 - | hypothetical protein AFE_1224 1076934 - 1077062 + | hypothetical protein AFE_1225 1077793 - 1077701 - | hypothetical protein AFE_1226 1080466 - 1077839 - | GTP-binding protein AFE_1227 1081581 - 1080466 - | Ser/Thr protein phosphatase family protein TERM 872 1081395 - 1081377 - G 83 -4.4 -5.08601 | GCATGGCAAGAAAAA GACGGCGC ATA GTGCGGTC GGTCACGGTCTGTGC AFE_1228 1081774 - 1082214 + | hypothetical protein AFE_1229 1082926 - 1082240 - | EAL domain protein AFE_1230 1084759 - 1082930 - | DNA ligase, NAD-dependent, putative AFE_1231 1084983 - 1084756 - | hypothetical protein AFE_1232 1086209 - 1085271 - | hypothetical protein TERM 873 1086120 - 1086082 - G 71 -6.6 -4.25848 | overlap 1086069 AATCCGCCAGCAAAA TGCACGGCTGGAAACCGC ACC GCGATCATGAGCCATGCA CCGACAAGTATCGGC TERM 874 1086210 - 1086220 + r 78 -2.4 -5.15969 | TACAGGGTTCGACAT GGTG ACT CTCC TTTTTTGCCTTCCAA AFE_1233 1086649 - 1086194 - | hypothetical protein TERM 875 1086383 - 1086406 + g 72 -3 -4.82901 | AAACCCATGGTGCCG GTAGCCGTCG AACT CGATAGCCAC TTTTTCTGCGGGGAA TERM 876 1086532 - 1086560 + g 70 -3.8 -4.67234 | opp_overlap 1086540 CGGCGTAAGGGGAGA TGGAAGTAGCAG CCTGC CCGCTCTTTCCA TTTTTCGCCTTGGGT AFE_1234 1086978 - 1086655 - | lipoprotein, putative AFE_1235 1087678 - 1087010 - | lipoprotein, putative AFE_1236 1088339 - 1087692 - | hypothetical protein AFE_1237 1088720 - 1088355 - | hypothetical protein AFE_1238 1089170 - 1088997 - | hypothetical protein AFE_1239 1089374 - 1089174 - | hypothetical protein AFE_1240 1089718 - 1089374 - | hypothetical protein TERM 877 1089609 - 1089560 - G 73 -4.9 -4.65895 | gap 2, opp_overlap 1089574 1089599, overlap 1089561 GTGGTCATCCAAAAA GGCCAC-CGC-GCCAAGGTGTCG CAACAC CGCCGCCTTGGCTGCGTACGGCG TGGCGCATTCGTGAC AFE_1241 1090422 - 1090147 - | DNA-binding protein HU family protein AFE_1242 1089791 - 1090249 + | hypothetical protein AFE_1243 1090729 - 1090415 - | hypothetical protein AFE_1244 1091016 - 1090726 - | hypothetical protein AFE_1245 1091528 - 1091016 - | hypothetical protein AFE_1246 1091625 - 1091840 + | hypothetical protein AFE_1247 1091852 - 1092022 + | hypothetical protein AFE_1248 1092451 - 1092194 - | hypothetical protein AFE_1249 1093496 - 1092444 - | hypothetical protein TERM 878 1093131 - 1093144 + g 74 -5.3 -4.43877 | opp_overlap 1093131, overlap 1093127 1093134 GTCACGTTCCAGAAT TTCCT CCCA AGGAA TTTCTTTCGGCGTTG TERM 879 1093758 - 1093736 - g 77 -11.2 -3.56594 | CGAAATGCTGCGAAA CCGGCGCGAA CAC CTGGCGCCGG AAACGCCCGTCATCG AFE_1250 1093608 - 1093799 + | hypothetical protein AFE_1251 1093796 - 1095655 + | lipoprotein, putative TERM 880 1096152 - 1096131 - gT 78 -2.2 -5.14563 | overlap 1096132 CTTCTCACGAAAAAA TCTTCCCG GACCTG CAGGACGA AGAGTAAGCCGGGAA AFE_1252 1097222 - 1096686 - | hypothetical protein AFE_1253 1095652 - 1096761 + | hypothetical protein TERM 881 1096857 - 1096825 - Gf 71 -5.6 -4.371 | gap 1, overlap 1096850 TCCAGCACATCAAAA CCGGCACCCTTGG GGTGGTGA CCAA-GGTGCGGG ATCCCGGCCCACACG TERM 882 1098380 - 1098353 - gH 81 -4.8 -4.96848 | overlap 1098354 CTTGGCATACAAAAA GGGGCCGATC CTGTATCT GATCGAGCCC AAAATCCGGGAGCGG TERM 883 1099010 - 1099000 - gH 71 -8.2 -3.86897 | CGGACGCGTCAGAAA CGCC GGC GGCG CCTGAACCAAAGGGA AFE_1254 1097205 - 1099712 + | hypothetical protein TERM 884 1100127 - 1100105 - g 78 -4.7 -4.7254 | opp_overlap 1100113 1100114 1100119, overlap 1100106 ATTCTGGAGGAAAAA CGCCGATCC GCCCA GGCTCGGCT GGCGCCTTTTGTCCA AFE_1255 1099712 - 1100605 + | hypothetical protein AFE_1256 1100598 - 1101200 + | hypothetical protein TERM 885 1101288 - 1101317 + T 95 -8 -4.87665 | gap 2, overlap 1101292 TGCGGTGCTGATTCG GCAA--CCCCGGAA GCAA TTCCGGGGTTTTGC TTTTTCTGGATCAAA TERM 886 1101292 - 1101311 + T 100 -13.6 -4.82678 | overlap 1101288 GTGCTGATTCGGCAA CCCCGGAA GCAA TTCCGGGG TTTTGCTTTTTCTGG AFE_1257 1102272 - 1101328 - | hypothetical protein AFE_1258 1103558 - 1102269 - | DNA topoisomerase domain protein TERM 887 1102706 - 1102686 - G 71 -8.3 -4.05446 | CGTGCCAAGCAGAAA CTGCACG ATCTGTG CGTGCAG CGCGCTGGGGTAGCC AFE_1259 1103790 - 1103578 - | hypothetical protein TERM 888 1103720 - 1103733 + gH 95 -8.1 -5.00616 | AGCGGAAATGATCCA CGGCA ATTC TGCCG TTTTTTGAAAGGAGA ssb-3 1103755 - 1104240 + | single-strand binding protein TERM 889 1104256 - 1104277 + FH 90 -5.7 -5.27335 | opp_overlap 1104256 TCCGACCCCACCCAA CCCCATCGC TTCG GCTTTGGGG TTTTTCTTTGGGCGC AFE_1261 1104272 - 1104502 + | hypothetical protein AFE_1262 1104748 - 1104548 - | hypothetical protein AFE_1263 1105514 - 1104831 - | hypothetical protein AFE_1264 1109700 - 1105489 - | hypothetical protein TERM 890 1108413 - 1108376 - G 70 -9.8 -3.49951 | opp_overlap 1108372 GAGAGGTTCAGATAA GAGTCCGCGCGCGA CTCAGCGTTC TCGCGCGAGGCCTC TAGGATTTGGTAAGC TERM 891 1108796 - 1108751 - G 89 -16.3 -3.36349 | gap 1, overlap 1108758 GAAAGTACAGACCAA GCCAGAAGACCACCGACCTCCT GCA AGAAGGTCT-CGGTCTCCTGGC TGCGCCCATACCGCT AFE_1265 1111031 - 1109805 - | ISAfe3, transposase AFE_1266 1113290 - 1111173 - | hypothetical protein TERM 892 1113065 - 1113082 + g 86 -12.7 -3.87075 | opp_overlap 1113065 GGACGTAGCGGACAA GCCGAGC CTCG GCTCGGC TTTCTGCGCCGTAAT TERM 893 1113082 - 1113065 - G 76 -12.7 -3.33492 | opp_overlap 1113065 GGACGTAGCGGACAA GCCGAGC CTCG GCTCGGC TTTCTGCGCCGTAAT AFE_1267 1113655 - 1113548 - | hypothetical protein AFE_1268 1114166 - 1114017 - | hypothetical protein AFE_1269 1113674 - 1114078 + | hypothetical protein TERM 894 1114094 - 1114116 + gF 100 -13.4 -5.06414 | CCCGACCCGCCCCAA CCCCGATGCA TTT TGCACCGGGG TTTTTCTTGGCCGGA TERM 895 1114255 - 1114269 + FH 70 -2.7 -4.82901 | opp_overlap 1114256, overlap 1114256 CTCCGGAATGAATCC ACGGC ATATC GCCGG TTTTTCTGAAAGGAG TERM 896 1114811 - 1114757 - g 70 -4.1 -4.61231 | opp_overlap 1114783, overlap 1114801 1114802 TGAGAGCGCCAAAAA GCGCATCTCCATGACAGCGCCAG ACCGGCTCA CCGTCGCTGAAACCGCGATGCGC GAGGCATTTAAGGAT AFE_1270 1114293 - 1114928 + | single-stranded DNA-binding protein, ERF family TERM 897 1114947 - 1114968 + F 100 -10.1 -5.27335 | TCTGATCTCCCCCAA CCCCAAGTC TTCG GACCTGGGG TTTTTCTTTGCCCAG AFE_1271 1115118 - 1115372 + | hypothetical protein AFE_1272 1115383 - 1115778 + | hypothetical protein TERM 898 1115869 - 1115890 + F 100 -10.1 -5.19879 | GCAGATCCTCCCCAA CCCCAAGTC TCCG GACCTGGGG TTTTTCTCTTTGGCC AFE_1273 1115993 - 1116475 + | hypothetical protein TERM 899 1116545 - 1116568 + G 100 -12.4 -4.48987 | GAATTGATCTATCCA GCCCCAAGTC TTCG GACCTGGGGC TTTTCCTTGTCCCAG TERM 900 1116638 - 1116651 + G 100 -9.5 -5.52384 | overlap 1116637 TCCTCGGCATTTATC GCGGC ATCC GCCGC TTTTTTTGATAGGAG AFE_1274 1116533 - 1116886 + | hypothetical protein AFE_1275 1116883 - 1117794 + | hypothetical protein TERM 901 1117804 - 1117824 + F 100 -7.6 -5.27335 | gap 1, opp_overlap 1117804, overlap 1117804 TTCTGATCTCACCAA CCCC-AAGC TTCG GCTTTGGGG TTTTTCTTTGGGCGC TERM 902 1117948 - 1117918 - g 72 -2.5 -4.73388 | AACCCTCATGAAAAA GACTAGATTCACG GTCAA CGGAAAACCAGTC TATAAAACGCGGATT AFE_1276 1117910 - 1118200 + | hypothetical protein TERM 903 1118248 - 1118270 + F 100 -13.4 -5.06414 | CCCATGACCCCCCAA CCCCAGTGCA TTT TGCACCGGGG TTTTTCTTGGGCGGA AFE_1277 1118335 - 1118781 + | hypothetical protein TERM 904 1118763 - 1118773 + F 76 -3.2 -5.03314 | TTTGCGGTCCGCAAG TCCA TCG TGGG TTTTTTGAGGGTGAC AFE_1278 1118792 - 1119235 + | hypothetical protein AFE_1279 1119247 - 1119705 + | hypothetical protein TERM 905 1119721 - 1119742 + TF 100 -10.1 -5.27335 | CCTGATCTCCCCCAA CCCCACGTC TTCG GACCTGGGG TTTTTCTTTGGCCGG AFE_1280 1120218 - 1119904 - | hypothetical protein AFE_1281 1120192 - 1120425 + | hypothetical protein TERM 906 1120451 - 1120471 + FH 100 -7.6 -5.27335 | gap 1, opp_overlap 1120445, overlap 1120451 CCCGACCAACCCCAA CCCC-AAGC TTCG GCTTTGGGG TTTTTCTTTGGCCGG TERM 907 1120585 - 1120568 - fH 89 -9.1 -4.62622 | overlap 1120569 CCAAGCAGAAAGAAA CGGCCGA CATT TCGGCCA CATCACTCATAGGTA TERM 908 1120584 - 1120569 - fH 73 -10.4 -3.36489 | overlap 1120568 CAAGCAGAAAGAAAC GGCCGA CATT TCGGCC ACATCACTCATAGGT AFE_1282 1120685 - 1121170 + | hypothetical protein TERM 909 1121187 - 1121208 + F 100 -11.5 -5.38054 | ATAGGACCCCCCCAA CCCCACGGC TTAG GCCTTGGGG TTTTTCTTTGTCCGG TERM 910 1121257 - 1121270 + F 100 -9.5 -5.52384 | overlap 1121256 TCTCCGGCATTTATC GCGGC CTCC GCCGC TTTTTTTGATAGGAG TERM 911 1121550 - 1121521 - g 71 -9.3 -3.72893 | gap 1, opp_overlap 1121524, overlap 1121524 GATTCCGCCATGAAA CAGGTGGACGCCAG ATT CTGGCGCTCAC-TG TTGGACCAGTCTGGC TERM 912 1121524 - 1121548 + G 72 -12.1 -3.02829 | opp_overlap 1121524 1121521 TCCGCCATGAAACAG GTGGACGCCAG ATT CTGGCGCTCAC TGTTGGACCAGTCTG AFE_1283 1121293 - 1122102 + | hypothetical protein AFE_1284 1122105 - 1122551 + | hypothetical protein TERM 913 1122566 - 1122588 + F 100 -13.4 -5.15167 | GCCTGACCCCCTCAG CCCCAGTGCA TCC TGCACCGGGG TTTTTCTTCGTCATC TERM 914 1122612 - 1122626 + F 70 -10 -3.34088 | opp_overlap 1122610 CGTCATCAATCGACT TCCGCA GTG TGCGGA TTCCTGTCTGGTACT AFE_1285 1122692 - 1123012 + | hypothetical protein TERM 915 1123014 - 1122990 - f 71 -6.4 -4.30809 | gap 1, overlap 1122993 GAACAGCCATGAAAA CCAT-GCTCGC GCTG GCGAGCTAAGG AGGAACCATGAAACT AFE_1286 1123040 - 1123954 + | hypothetical protein TERM 916 1123969 - 1123990 + F 90 -5.7 -5.27335 | opp_overlap 1123969 GCCTGATCTATCCAA CCCCATTGC TTCG GCTTTGGGG TTTTTCTTTGAGCGG AFE_1287 1124083 - 1124322 + | hypothetical protein AFE_1288 1124322 - 1124777 + | hypothetical protein TERM 917 1124792 - 1124813 + F 90 -5.7 -5.27335 | opp_overlap 1124792 ACCTGATCCACCCAA CCCCATCGC TTCG GCTTTGGGG TTTTTCTTTGGGCGG AFE_1289 1124808 - 1125167 + | hypothetical protein TERM 918 1125556 - 1125545 - g 70 -3.6 -4.65933 | GACTTGCAAAACAAA GCGA TTAA CCGC GCGATTGAAAAGACA AFE_1290 1125164 - 1125601 + | hypothetical protein AFE_1291 1125620 - 1126051 + | hypothetical protein TERM 919 1126066 - 1126088 + F 100 -13.4 -5.28942 | opp_overlap 1126066 ACCCGACCCACCCAA CCCCAGTGCA TCC TGCACCGGGG TTTTTCTTTGCCATC TERM 920 1126088 - 1126066 - f 93 -15.6 -3.07935 | opp_overlap 1126066 ACCCGACCCACCCAA CCCCAGTGCA TCC TGCACCGGGG TTTTTCTTTGCCATC TERM 921 1126112 - 1126126 + F 70 -10 -3.34936 | opp_overlap 1126111 1126110 TGCCATCAATCAACT TCCGCA GTG TGCGGA TTCCTGTCTGGTATT TERM 922 1126344 - 1126355 + G 73 -4.4 -4.60487 | opp_overlap 1126344 GCTGGGCCCCAGGAA CAAG AGGA CTTG TTTTTGGGGCTGGTA TERM 923 1128086 - 1128113 + G 70 -10.6 -3.47349 | opp_overlap 1128092, overlap 1128092 TCCCGCAAATCAGGC GGGAAAGGCGTT GATT GACGCCTTTCGC TTGTCCGTTTGAGAA AFE_1292 1126191 - 1128125 + | hypothetical protein TERM 924 1128155 - 1128132 - f 76 -5.2 -4.82901 | opp_overlap 1128131 1128135 1128147 TCCGTTTGAGAAAAA GAAGCCGGGT TTCG ATCTGGCTTC CTGATTTATCCCAAC TERM 925 1128170 - 1128192 + F 100 -13.4 -5.27335 | CCTGATTTATCCCAA CCCCAGTGCA TTC TGCACCGGGG TTTTTCTTTGGCCGG TERM 926 1128575 - 1128547 - gf 71 -9.6 -3.55071 | gap 2, opp_overlap 1128548 CCAGACTGGTGGAAA CCGCGACCGGCGAC GGA GCCGCC--TCGCGG GCCGGGTTCCATGGC AFE_1293 1128277 - 1128618 + | hypothetical protein TERM 927 1128630 - 1128651 + G 100 -10.1 -5.09762 | TTAACGATCCCCCAA CCCCACGTC TCCG GACCTGGGG TTTTCTTTATTACCG AFE_1294 1128593 - 1128763 + | hypothetical protein AFE_1295 1128803 - 1129441 + | DNA-binding response regulator AFE_1296 1129497 - 1130459 + | transcriptional regulator, LysR family TERM 928 1130511 - 1130489 - f 100 -15.6 -3.47227 | opp_overlap 1130489 CGCCAATCACCACAA CCCCGATGCA TCT TGCACCGGGG TTTTTCTTTGGCCGG TERM 929 1130489 - 1130511 + F 100 -13.4 -5.27335 | opp_overlap 1130489 CGCCAATCACCACAA CCCCGATGCA TCT TGCACCGGGG TTTTTCTTTGGCCGG TERM 930 1131111 - 1131092 - g 79 -12.2 -3.55444 | TGGTGATTCCTGAAA CGGGTGAA GTGA TTCACCCG CATAAGGACTTCCGG AFE_1297 1130614 - 1131534 + | cobalamin biosynthesis protein, CobS family TERM 931 1131550 - 1131571 + F 84 -5.7 -5.06414 | opp_overlap 1131550 CCCTGATCCCACCAA CCCCATTGC TTCG GCTTTGGGG TTTTTCTTCGCCCGC AFE_1298 1131706 - 1131906 + | hypothetical protein AFE_1299 1131919 - 1132812 + | hypothetical protein TERM 932 1132828 - 1132851 + F 100 -10.4 -5.17744 | gap 1, opp_overlap 1132828, overlap 1132846 CCGGATCACACCCAA CCCTC-ATGCA TCC TGCATCGAGGG TTTTTCTTCGTCTGT AFE_1300 1132941 - 1133351 + | hypothetical protein TERM 933 1133372 - 1133394 + F 100 -13.4 -5.38958 | CCTGATCTCCCTCAA CCCCAGTGCA TCC TGCACCGGGG TTTTTCTTTGTCGCT AFE_1301 1133482 - 1134501 + | hypothetical protein TERM 934 1134515 - 1134537 + F 100 -13.4 -5.16841 | opp_overlap 1134515 AGATAATCCCACCAA CCCCAGTGCA ACT TGCACCGGGG TTTTTCTTCGTCTGC TERM 935 1134537 - 1134515 - f 100 -15.6 -3.19921 | opp_overlap 1134515 AGATAATCCCACCAA CCCCAGTGCA ACT TGCACCGGGG TTTTTCTTCGTCTGC AFE_1302 1134627 - 1134971 + | hypothetical protein AFE_1303 1135639 - 1135418 - | hypothetical protein AFE_1304 1135661 - 1136290 + | transposon, resolvase AFE_1305 1136287 - 1137681 + | transposon, transposase AFE_1306 1138391 - 1138008 - | hypothetical protein AFE_1307 1137805 - 1138149 + | hypothetical protein TERM 936 1138186 - 1138164 - Gf 74 -11.3 -3.16683 | opp_overlap 1138164 ACCCGATCCCACCAA CCCCAATGC GTTTT GCATCGGGG TTTTTCTTTGCCTGG TERM 937 1138164 - 1138186 + gF 100 -9.8 -5.30616 | opp_overlap 1138164 ACCCGATCCCACCAA CCCCAATGCG TTT TGCATCGGGG TTTTTCTTTGCCTGG AFE_1308 1138370 - 1139140 + | hypothetical protein AFE_1309 1139561 - 1139409 - | hypothetical protein TERM 938 1139496 - 1139517 + gFH 100 -11.5 -5.08601 | AGCTGACCCCCTCAA CCCCATGGC TTCG GCCTTGGGG TTTTTCTTCGCCTGG AFE_1310 1139512 - 1139631 + | hypothetical protein TERM 939 1139636 - 1139650 + FH 70 -2.7 -4.82901 | opp_overlap 1139637, overlap 1139637 CTCCGGAATGAATCC ACGGC ATATC GCCGG TTTTTCTGAAAGGAG AFE_1311 1139674 - 1140201 + | hypothetical protein TERM 940 1140212 - 1140234 + T 100 -13.4 -5.20333 | ATTGACCCCCCCCAA CCCCGATGCA TCT TGCACCGGGG TTTTTCTTATGCCTA AFE_1312 1140414 - 1140247 - | hypothetical protein TERM 941 1140765 - 1140778 + G 70 -4.5 -4.56597 | overlap 1140759 1140758 GGAAGATTTGATGGA GCGAT GCCC GTCGC TTTTTGCCACACGGG AFE_1313 1140454 - 1141008 + | hypothetical protein TERM 942 1141141 - 1141163 + G 100 -14.2 -5.23644 | TTTGATCCACCCCAA CCCCAATGCA CTT TGCGTTGGGG TTTTTCTATTTGGTT AFE_1315 1141127 - 1141258 + | hypothetical protein AFE_1314 1141397 - 1141227 - | hypothetical protein AFE_1316 1141345 - 1141626 + | hypothetical protein TERM 943 1141680 - 1141702 + FH 85 -9 -4.42788 | CGCGATCACTCCCAA CCCCAGCGCA TTT TGCACCGGGG TTTTCTGCGGTTCGG AFE_1317 1141790 - 1141990 + | hypothetical protein AFE_1318 1142009 - 1142212 + | hypothetical protein AFE_1319 1142209 - 1142349 + | hypothetical protein TERM 944 1142359 - 1142380 + T 100 -11.5 -5.1356 | GTATGACCACCCCAA CCCCAGTGC TTTT GCACCGGGG TTTTTCTTCGTCAAA AFE_1320 1142939 - 1142391 - | hypothetical protein TERM 945 1142839 - 1142851 + g 70 -3.3 -4.68705 | overlap 1142833 GCTCCCACGCGGGTT GCCAC CCA GTCGC TTTTGTTCAGATTCT TERM 946 1143013 - 1142993 - R 100 -9.1 -5.11613 | opp_overlap 1142996 1142998, overlap 1142998 AGATTAGTGAAAAAA CAAAAGGTT CGC AACCTCTTG TATCAAACCGCTTCT TERM 947 1143008 - 1142998 - R 95 -5.4 -5.43553 | opp_overlap 1142998 1142996, overlap 1142993 AGTGAAAAAACAAAA GGTT CGC AACC TCTTGTATCAAACCG AFE_1321 1143364 - 1143029 - | hypothetical protein AFE_1322 1144000 - 1143383 - | hypothetical protein AFE_1323 1144984 - 1144043 - | hypothetical protein TERM 948 1145294 - 1145319 + r 91 -7.6 -4.85782 | gap 1, opp_overlap 1145297, overlap 1145297 ATATCATACTACGCA CAAG-GGTCGC TGATC GCGGCCCCTTG TTTGTTTTTCACGCC AFE_1324 1145497 - 1145282 - | hypothetical protein TERM 949 1145349 - 1145366 + g 84 -6.3 -5.0133 | gap 1, opp_overlap 1145352, overlap 1145352 CCTAAGCGGGCGATA TCACGTCC TGC GGACG-GA TTTTTTGAGAGGATG AFE_1325 1145618 - 1145965 + | hypothetical protein TERM 950 1146247 - 1146218 - g 88 -6.4 -4.87133 | overlap 1146219 1146220 AGGCCGGAAAGAAAA TGTTTGCTCGCC CGTTTT GGCGAGCAAAGG TCGTGGTGGACATAA TERM 951 1146246 - 1146219 - g 70 -9.9 -3.51557 | overlap 1146218 1146220 GGCCGGAAAGAAAAT GTTTGCTCGCC CGTTTT GGCGAGCAAAG GTCGTGGTGGACATA TERM 952 1146245 - 1146220 - g 73 -13.4 -2.70452 | overlap 1146219 1146218 GCCGGAAAGAAAATG TTTGCTCGCC CGTTTT GGCGAGCAAA GGTCGTGGTGGACAT AFE_1326 1145997 - 1146689 + | hypothetical protein TERM 953 1146732 - 1146710 - f 74 -7.6 -4.20531 | opp_overlap 1146710 CAGATCTACCCAAAA CCCCGGTGCA ATG TGTAGCGGGG TTTTTCCTGAATCGA TERM 954 1146710 - 1146732 + F 95 -9.8 -4.7497 | opp_overlap 1146710 CAGATCTACCCAAAA CCCCGGTGCA ATG TGTAGCGGGG TTTTTCCTGAATCGA AFE_1327 1146884 - 1147639 + | hypothetical protein TERM 955 1147654 - 1147676 + F 100 -13.4 -5.33405 | GTCCGACCCCTCCAA CCCCAGTGCA TCT TGCACCGGGG TTTTTCTTTGATCGC TERM 956 1147737 - 1147787 + F 77 -8.1 -4.09519 | gap 2, opp_overlap 1147735 1147734, overlap 1147779 GGAAATTGAACATCC GCCCGCGCATTCCCCCTGCTGGGCC GTA GGC-CAGGAGGGGGTCAA-GCGGGC TTGTTTGTCCATCGT TERM 957 1148190 - 1148165 - gf 71 -9.6 -3.57144 | GGTGGTATCCGTAAA CGGCGCGATG CCTTGC CGCCGCGCCG GACCGGGGAAAACGC AFE_1328 1147883 - 1149202 + | transposase, IS605 OrfB family protein, putative AFE_1329 1149174 - 1149338 + | hypothetical protein TERM 958 1150232 - 1150212 - g 71 -6.7 -4.14511 | AAGCGTATCCCAAAA CCCGCCAGC AGC GCTGCTGGG TGCACAAGACCGCCA AFE_1330 1149446 - 1150708 + | ISAfe2, transposase TERM 959 1151017 - 1151035 + F 73 -8.9 -3.79071 | ATCCCCTAAGTTGAT CCGTATG TAACC CATACGG TTTCAATATTCTCCC TERM 960 1151057 - 1151078 + F 93 -4.3 -5.47159 | opp_overlap 1151057 TATTCTCCCACCCAA CCCTATTGC TTCG GCTTTAGGG TTTTTCTTTGTTCGA AFE_1331 1151144 - 1151512 + | hypothetical protein TERM 961 1151542 - 1151561 + TF 100 -9.2 -5.22006 | TCTGACCCACCCCAA CCCCAAGC TTCG GCCTGGGG TTTTTCTTGTCCTGA AFE_1332 1151904 - 1151692 - | hypothetical protein AFE_1333 1151864 - 1152244 + | hypothetical protein AFE_1334 1152388 - 1152287 - | hypothetical protein TERM 962 1152782 - 1152794 + G 85 -3.3 -5.40464 | GGATGCCCAGCTCAC CCACG ATG CGTTG TTTTTGTTTCTGCTC AFE_1335 1152651 - 1152947 + | hypothetical protein AFE_1336 1152992 - 1153210 + | hypothetical protein AFE_1337 1153226 - 1153321 + | hypothetical protein TERM 963 1153551 - 1153581 + G 72 -13.3 -2.56596 | gap 1, overlap 1153539 AAGGTGACGGCCACT CAGCCGAGTCAGCC CTCC GGC-GACTCGGCCG TAACTTCATCGCAGC AFE_1338 1153377 - 1154420 + | PAP2 family protein AFE_1339 1154434 - 1155567 + | polysaccharide biosynthesis/export domain protein TERM 964 1157142 - 1157132 - g 72 -2.4 -4.72986 | CACTCTTACCAAAAA CCGG ATA CTGG ACACGGCGTTGATCG AFE_1340 1155636 - 1158098 + | tyrosine-protein kinase, putative AFE_1341 1158095 - 1158856 + | protein-tyrosine phosphatase, putative galE 1158856 - 1159854 + | UDP-glucose 4-epimerase TERM 965 1160426 - 1160384 - g 71 -9.1 -3.75169 | gap 1, opp_overlap 1160424, overlap 1160417 GACGACTTCATGAAA CCCG-ACCGCATCATCGTTG GCAC CGACAGTGAAGCGGTGCGGG AGCGCATGCGCGCCC AFE_1343 1159883 - 1161205 + | UDP-glucose 6-dehydrogenase AFE_1344 1161287 - 1162753 + | polysaccharide biosynthesis protein TERM 966 1163366 - 1163392 + G 70 -3.7 -4.59773 | overlap 1163368 GTCGACAAATCGATC GCTTGGGTAGT GCAAA ACTGCCTAACC TTTTTGGCGATCAAA AFE_1345 1162750 - 1163445 + | hypothetical protein AFE_1346 1163445 - 1164476 + | glycosyl transferase, group 2 family protein AFE_1347 1164564 - 1165481 + | hypothetical protein TERM 967 1165611 - 1165625 + GF 83 -8.6 -4.43501 | CAATTGGGGCCTTGT CGATGA AAC TCATCG TTTTGTGGGTAAGTT AFE_1348 1165585 - 1166298 + | hypothetical protein TERM 968 1167282 - 1167297 + GF 71 -10.4 -3.30441 | GTGGACGGGCTGGTG CGCGCT GCCC AGCGCG TTCTGGACGATCCTG AFE_1349 1166268 - 1167431 + | glycosyl transferase, group 1 family protein AFE_1350 1167428 - 1168852 + | hypothetical protein TERM 969 1168933 - 1168952 + G 87 -10.6 -4.3467 | overlap 1168935 AATTATGAAATTGCC CAGGCCGC GCTT GCGGCCGG TTTTCATCTGCAAAT AFE_1351 1168849 - 1170021 + | glycosyl transferase, group 1 family protein AFE_1352 1170027 - 1170206 + | lipoprotein, putative TERM 970 1170624 - 1170641 + G 71 -5.6 -4.30995 | CATCTGGCGCGGCAT CGGTTT GGGAAA AAACCG TTATTTTATGCGCAG asnB 1170207 - 1172105 + | asparagine synthase (glutamine-hydrolyzing) TERM 971 1172304 - 1172268 - g 75 -7.9 -4.15044 | gap 1, opp_overlap 1172282 1172283, overlap 1172302 CTGTTGCTGAACAAA GCGGTGGCCAGGTGCG CGCCTT CGCGCC-AGCCAACGC GCCTTTGTGGCAGCG TERM 972 1172536 - 1172555 + G 76 -6.4 -4.55295 | gap 1, opp_overlap 1172513 CGAAACGGCGGTGTA TCGGCGCGC GCG GCG-GCTGA TTTGTTTGTCCCAGG AFE_1354 1172111 - 1173259 + | glycosyl transferase, group 1 family protein TERM 973 1173852 - 1173868 + G 77 -7.9 -4.35461 | opp_overlap 1173851 1173852 CGCGTGATACACAAC GGCATCG ATC CGAAGCC TTTTGATGGTATTAC AFE_1355 1173252 - 1174493 + | glycosyl transferase, group 1 family protein TERM 974 1175708 - 1175680 - g 76 -8.7 -4.06419 | TTCTTTTACAAACAA TCCGCCGCGGCCA TCA TCGCCGCCGTGGA GCGCTTCGAGGAAGC AFE_1357 1174696 - 1175847 + | glycosyl transferase, group 1 AFE_1358 1175844 - 1176236 + | hypothetical protein AFE_1359 1176233 - 1176637 + | nucleotidyltransferase, putative AFE_1360 1176627 - 1177067 + | hypothetical protein AFE_1361 1177173 - 1177466 + | plasmid stability protein, putative AFE_1362 1177463 - 1177891 + | plasmid stability protein, putative AFE_1363 1178048 - 1178452 + | nucleotidyltransferase, putative AFE_1364 1178442 - 1178882 + | hypothetical protein TERM 975 1179336 - 1179363 + G 80 -11.4 -3.7108 | gap 1 TCCGGCTGGTGGACA GGTTGCAA-GCGG ATT CCGTATTGCAACC TTTGCGTCTGAAGCT TERM 976 1180579 - 1180598 + G 79 -12.1 -3.53224 | CGCCGCGCTATCCCT CCCCGGG CTGAAC CCCGGGG TTTCCCGCGCAAATG AFE_1365 1179203 - 1180618 + | HNH endonuclease domain protein TERM 977 1181303 - 1181314 + G 74 -3.6 -4.84017 | overlap 1181295 1181298 GGCATGTTCTGCTTC CGCG CGGA TGCG TTTTTATCCGCCCTT AFE_1366 1180676 - 1182118 + | mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase AFE_1367 1182262 - 1182489 + | hypothetical protein AFE_1368 1182486 - 1182839 + | hypothetical protein AFE_1369 1182889 - 1183668 + | PIN domain protein TERM 978 1184604 - 1184627 + G 90 -5.8 -5.24129 | CTGGCGTGGCGGATT CGCCGGGACG ATGG CGGGCCGGTG TTTTTTGTGCAGGAA AFE_1370 1183665 - 1185119 + | undecaprenyl-phosphate galactosephosphotransferase, putative AFE_1371 1185141 - 1189286 + | helicase, SNF2/RAD54 family AFE_1372 1190738 - 1189572 - | fic family protein TERM 979 1189986 - 1190014 + g 78 -7.4 -4.70583 | gap 1, overlap 1189964 1189989 1189991 ATCGAGATCGTTGCG GCGCGTCTCGTCG CAGG CGGCGAGGTG-GC TTTTGTATTCGTGGA TERM 980 1191088 - 1191102 + r 71 -7.8 -3.92324 | CCATAGAAAGTTTGC TGCCCG GCT TGGGCA TTTCCTGTTCCAACC AFE_1373 1191998 - 1191240 - | transposition helper protein TERM 981 1192635 - 1192651 + H 89 -13.7 -3.53224 | overlap 1192645 TCGAAGGTGCTTTTA CGGCTGC CTG GCAGCCG TTTGAACGGACGCTG TERM 982 1192829 - 1192809 - H 71 -11.9 -2.52933 | overlap 1192808 TTGTAAGTCATCAAC TGCCTGTCA TTC CGACAGGCA TTCGCCCATAGACGT AFE_1375 1192897 - 1193109 + | transposon, orf1 AFE_1376 1193286 - 1193738 + | transposon, orf2 TERM 983 1194043 - 1194053 + G 71 -8.2 -4.0641 | opp_overlap 1194029 CCACCGACCATCTCC GGCG CGA CGCC TTTCTGTACGTCCGA TERM 984 1194392 - 1194372 - g 78 -13.3 -3.14931 | opp_overlap 1194371 1194370 1194372 CTGATCCTTGATGAA GACGGGATC TAC GATCCCGCC CATTTTAATGATCGC AFE_1378 1194000 - 1196084 + | transposon, orf3 AFE_1379 1197061 - 1196897 - | hypothetical protein AFE_1381 1196985 - 1197239 + | hypothetical protein AFE_1380 1197501 - 1197205 - | hypothetical protein AFE_1382 1197720 - 1197505 - | hypothetical protein AFE_1383 1198025 - 1197717 - | hypothetical protein AFE_1384 1198375 - 1198034 - | hypothetical protein AFE_1386 1200024 - 1200248 + | hypothetical protein TERM 985 1200502 - 1200513 + F 90 -5.8 -5.14563 | opp_overlap 1200497 1200502 TCCACCAAATCAAAA GGCT GATC AGCC TTTTTTCCTCCCCGA TERM 986 1200513 - 1200502 - f 75 -5.8 -4.58773 | opp_overlap 1200502, overlap 1200497 TCCACCAAATCAAAA GGCT GATC AGCC TTTTTTCCTCCCCGA TERM 987 1201566 - 1201579 + G 70 -4.5 -4.51765 | opp_overlap 1201566, overlap 1201557 GGCGGATGGAAGAAA GATCC GTGG GGGTC TTTATTTCACTTGTG TERM 988 1201668 - 1201679 + G 85 -3.6 -5.42259 | overlap 1201648 CGGTCTGGGTGACTT CCCG TTGG TGGG TTTTTTTGCCAATGC AFE_1387 1200631 - 1201767 + | hypothetical protein TERM 989 1201936 - 1201971 + G 71 -7.4 -4.1891 | TTCGGCATCGGACTG GGCCTGGCGGCTGGCC TGCT GATCATTCTCCAGGCC TTTCTGTTGGCGCAC TERM 990 1203187 - 1203159 - g 100 -16.1 -4.10161 | TACCATCGCCGAAAA TATCCGCATCGGG CGC CCTGATGCGGATA TGGCCGCCCTGCGGG cydD 1201870 - 1203603 + | ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD TERM 991 1204040 - 1204071 + G 95 -6.4 -5.31275 | overlap 1204045 TTTCTGGTGGCCGGG GTGGCGACGCTCAC GATG GCGGGCGTCTTCGC TTTTTTCTCCTGGCG AFE_1390 1203596 - 1205353 + | ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC AFE_1389 1205697 - 1205350 - | hypothetical protein ygfZ 1206666 - 1205701 - | folate-binding protein YgfZ TERM 992 1205855 - 1205834 - GH 88 -11.5 -4.11484 | opp_overlap 1205832 1205852 GCCAAGGCGGCAAAA CCGCCCAGG GGAT CCTGTGCGG CGTTGATAACGATGC TERM 993 1206048 - 1206065 + gH 80 -3.5 -5.1101 | gap 1, overlap 1206052 CCAGCACCTCCAGAT TCAGTTCC TGG GGAA-TGA TTTTTTCCGTAGTGG nadB 1208714 - 1207125 - | L-aspartate oxidase AFE_1393 1206650 - 1207180 + | hypothetical protein TERM 994 1207485 - 1207514 + gF 71 -11.3 -2.87132 | overlap 1207484 1207485 GGCAGTGGTTGGTTG CCCCGGCGATCGC CCCG GCGTTTGCCGTGG TCTGTCGGGCAGGCG TERM 995 1208294 - 1208314 + gF 86 -12.5 -3.65902 | TGGCGGGTTCCGCCA GCACCCGGC GCA GCAGGGTGC TTTCGATGACGTGGC rpoE 1208831 - 1209457 + | RNA polymerase sigma-E factor AFE_1395 1209454 - 1210116 + | hypothetical protein TERM 996 1210276 - 1210292 + F 74 -7.9 -4.11295 | overlap 1210262 TGTGCTGGGTAGGCA GCGCCTT GTG ATGGCGC TTTGTATGGGTTTGG TERM 997 1210580 - 1210590 + G 70 -4.6 -4.46926 | opp_overlap 1210568 TATCAGGTGCAATCC CTGG GTT CCGG TTTTGTCATCAGCTC AFE_1396 1210286 - 1211725 + | serine protease, DO/DeqQ family TERM 998 1211745 - 1211767 + F 91 -7.7 -4.98857 | gap 1 GGCGATCGCCGCGAA GGGCTGG-GC GTTT GTACCAGCCC TTTTTGTGATTGCAT TERM 999 1212852 - 1212862 + G 78 -6.8 -4.66264 | CCCTGGGTTTTGGTT TCCG GTG CGGA TTTTTGGGGCTTTTG lepA 1211831 - 1213633 + | GTP-binding protein LepA TERM 1000 1213648 - 1213636 - f 74 -6.9 -4.30441 | opp_overlap 1213637, overlap 1213637 TGACAAGAGGTAAAA CGCGC ACT GCGCA ACTTGTGCGGAGGCT lepB 1213700 - 1214491 + | signal peptidase I AFE_1399 1214574 - 1215008 + | hypothetical protein TERM 1001 1215564 - 1215537 - g 80 -9.8 -4.13767 | opp_overlap 1215557, overlap 1215538 TGCGCGATCCCAAAA CGCGCCTGCAGG AATT CCTGCAGGGACA GGGACGTCCTGTACC rnc 1215071 - 1215751 + | ribonuclease III era 1215744 - 1216658 + | GTP-binding protein Era AFE_1402 1216648 - 1217415 + | DNA repair protein RecO, putative pdxJ 1217412 - 1218137 + | pyridoxal phosphate biosynthetic protein PdxJ TERM 1002 1218263 - 1218276 + G 82 -9.5 -4.36914 | overlap 1218260 1218268 ATGCCGGTGGAAGCC GCGGC CGGC GCCGC TTTTCTGGCGCGACG acpS 1218134 - 1218523 + | holo-(acyl-carrier-protein) synthase TERM 1003 1218730 - 1218764 + G 71 -5.6 -4.42238 | CTTGCGCTTCACTAC GGAGGTTGCCGAGGGT ATC ACCCATGGGGATTTCC TTTTCATTGCCGTGG AFE_1405 1218527 - 1219849 + | UDP-glucose 6-dehydrogenase TERM 1004 1219998 - 1220053 + G 71 -8.7 -3.72695 | gap 1, opp_overlap 1219995 CGAGAGGAAGAACGT CCCGGCGGCGCCGCCAACGTC-GCCC TGAAT GTGCTGGCGCTGGGGGCGCAGGCGCG TTTGCTGGCCCCGGT TERM 1005 1220591 - 1220613 + G 74 -4 -4.8048 | GAATGCCATCCATCA CCATCCGG CTCAGGC CCGGGAGG TTTTTGATGTAACGG AFE_1406 1219851 - 1220801 + | kinase, pfkB family AFE_1407 1220791 - 1221573 + | PP-loop family protein hslO 1221566 - 1222408 + | 33 kDa chaperonin TERM 1006 1222906 - 1222921 + T 100 -10.4 -5.46629 | opp_overlap 1222904 1222906 ATTTGTAAGGAAAGA GCCAGC GCAT GCTGGC TTTTTTTGGGGTGTT TERM 1007 1222921 - 1222906 - T 74 -10.4 -3.54414 | opp_overlap 1222906, overlap 1222904 ATTTGTAAGGAAAGA GCCAGC GCAT GCTGGC TTTTTTTGGGGTGTT TERM 1008 1222987 - 1223000 + T 80 -5.2 -4.8622 | opp_overlap 1222971 GCCAGCATTTTTGCC GGGC TTGGCC GCCC TTTTTCCTTCCAAGA AFE_1412 1223632 - 1223126 - | hypothetical protein TERM 1009 1223471 - 1223489 + g 74 -6.7 -4.43351 | CAGTTTGATGATCGC CGCCAGT CGCTT ATTGGCG TTCTTTTTCACGTAT TERM 1010 1223501 - 1223516 + g 80 -3.2 -5.06414 | overlap 1223497 GGCGTTCTTTTTCAC GTATCC GACG GGATCC TTTTTCTTGAAGGCC sohA 1223958 - 1223629 - | htrA suppressor protein TERM 1011 1223988 - 1224040 + r 70 -8.7 -3.65046 | gap 1, opp_overlap 1223999 AAAGGTGCAGATGTC TTGCATGATAATGCAATCGCCTTG CCATGT CAATGCAATTGCATTGTC-TGCGA TTGTTGCCGTCCGGC AFE_1414 1224400 - 1224098 - | hypothetical protein TERM 1012 1224272 - 1224286 + g 74 -11.4 -3.49618 | overlap 1224267 CCCAGGAAAATCTGT TGCGGC TCG GCCGCA TTGATTATCTGGACG AFE_1415 1224681 - 1224415 - | hypothetical protein AFE_1416 1224927 - 1224727 - | hypothetical protein AFE_1417 1225520 - 1225026 - | acetyltransferase, GNAT family AFE_1418 1225789 - 1225517 - | hypothetical protein AFE_1419 1226199 - 1225870 - | hypothetical protein AFE_1421 1226511 - 1226786 + | hypothetical protein AFE_1422 1227687 - 1226866 - | Ser/Thr protein phosphatase family protein TERM 1013 1227412 - 1227393 - G 70 -3.4 -4.652 | overlap 1227394 AAAGCATTTCAAAAA CCGGGTCA TGGT TGCCCCGT ACATAGCGTACCTGC AFE_1423 1228188 - 1227847 - | hypothetical protein AFE_1424 1228243 - 1228371 + | hypothetical protein AFE_1425 1228383 - 1229504 + | glycosyl transferase, group 1 family protein TERM 1014 1229710 - 1229722 + G 72 -2.6 -4.82901 | opp_overlap 1229719 TCATGCGTGTGCCGG CCTG GAAAA CGGG TTTTTATCCCGAAGA AFE_1427 1229538 - 1230752 + | glycosyl transferase, group 1 family protein AFE_1426 1230991 - 1230731 - | hypothetical protein TERM 1015 1230888 - 1230906 + g 73 -13.2 -2.78073 | overlap 1230864 1230887 TAGCCCTGGCTGCGA CAGGTCTG CGC CAGACCTG CTTGTTCGCGATCAT TERM 1016 1231763 - 1231743 - g 70 -4 -4.60924 | gap 1, overlap 1231747 CAAAGTTTGGAAAAA GCACC-GCA CTTC TGCTGATGC GCGTATCCCAGTTTT AFE_1428 1231481 - 1232929 + | cytochrome c AFE_1429 1232944 - 1233585 + | cytochrome c552, putative AFE_1430 1234627 - 1233659 - | cation diffusion facilitator family transporter TERM 1017 1234301 - 1234289 - G 72 -2.6 -4.78107 | overlap 1234291 GACCACCAGCAAAAA GACG GCATT CGCC AGCGCCGCGAGAATG TERM 1018 1234689 - 1234671 - H 100 -10.2 -4.75372 | ATGACGTATTAAAAA CCCTGGCG CCA CTCCAGGG TCAAGGGGGTATGAT AFE_1431 1234731 - 1234967 + | transcriptional regulator, MerR family TERM 1019 1234985 - 1234973 - g 84 -3.3 -5.17353 | overlap 1234974 AGACGTATGAAAAAA TCACG TTT CGTGG TCATGGTCGGCTTGC AFE_1432 1234964 - 1235518 + | lipoprotein, putative TERM 1020 1236290 - 1236265 - g 70 -4 -4.58395 | gap 1, opp_overlap 1236265, overlap 1236266 GGTATTGCCGAAAAA GCGCC-AGAAC CTGCT GTTCTCGGCGA CGTTTTCGCCGGAAA TERM 1021 1236591 - 1236564 - g 85 -15.6 -3.22475 | overlap 1236562 TCCACGGCGATAAGA GCCAGGGCGC CCGTACCC GCGCCCTGGC GGAGTTCAAGGAAGG rhlE 1235720 - 1236976 + | ATP-dependent RNA helicase RhlE phoB 1237096 - 1237827 + | DNA-binding response regulator PhoB phoR 1237889 - 1239217 + | phosphate regulon sensor protein PhoR TERM 1022 1239336 - 1239386 + G 91 -13.3 -3.90586 | opp_overlap 1239363 TGATGAGCCTGGGTG TGGCAGGGCTGGC-GCAGGCGGAAA CCA TTTCCGCC-GCAGGCGGCACAGCCA TTTATCCCGTCCTGT TERM 1023 1240270 - 1240257 - g 78 -4.5 -4.77036 | TGCCATTACCAAAAA CTACG GTGA CGCAG ATTGAGGCGTACTGG pstS-2 1239287 - 1240306 + | phosphate ABC transporter, periplasmic phosphate-binding protein pstC-2 1240363 - 1241340 + | phosphate ABC transporter, permease protein PstC TERM 1024 1241635 - 1241665 + G 91 -4.5 -5.56568 | opp_overlap 1241644 ATCTCGCGGAGTTTG CGCAAGGCAGCCG ACTCG CGGCAGTCATCCG TTTTTTTAATGATAT pstA 1241337 - 1242191 + | phosphate ABC transporter, permease protein PstA TERM 1025 1242221 - 1242235 + G 85 -3.5 -5.40072 | AAAACCAAAATATCC GTCCG CCACC TGGAC TTTTTTTACGGGAGC pstB 1242191 - 1242958 + | phosphate ABC transporter, ATP-binding protein phoU 1242970 - 1243683 + | phosphate transport system protein PhoU TERM 1026 1244698 - 1244720 + G 83 -4.7 -5.1287 | opp_overlap 1244696 1244698 TATTGCGTAATCAGA GCGTGGCGC GGTGG GCGGAACGC TTTTTTACCTCTGCG ppx 1243686 - 1245197 + | exopolyphosphatase AFE_1442 1245191 - 1245316 + | hypothetical protein AFE_1443 1245451 - 1246041 + | membrane protein, DedA family TERM 1027 1246473 - 1246515 + G 80 -12 -3.73647 | gap 2, opp_overlap 1246469 CGGTACCAAACGCCA GGCGCGCGAGGCCGTCGAGC AGGAA GCTCGACG-CAGCG-GCGCC TTCTTCGTGAATCAG rpsB 1246246 - 1246998 + | ribosomal protein S2 TERM 1028 1247196 - 1247178 - g 72 -2.3 -4.8543 | gap 1, overlap 1247179 CAAGGCCGATAAAAA GGCGAGCC GGGT GGC-CGCA GAGGGCGTCATCGTC TERM 1029 1247337 - 1247313 - g 73 -13.6 -2.70932 | gap 1, overlap 1247293 1247292 GGCGCTGGCGAAGGA CTGCGCC-GGG CAGG CCCTGGCGCAG GGGCTCAAAGATGCC tsf 1247026 - 1247904 + | translation elongation factor Ts pyrH 1247905 - 1248630 + | uridylate kinase frr 1248627 - 1249187 + | ribosome recycling factor uppS 1249221 - 1249952 + | undecaprenyl diphosphate synthase TERM 1030 1250703 - 1250723 + G 81 -6 -4.79683 | overlap 1250695 1250704 GCATGAGCGCAGGCA TCCCGGTG TTTGT CGCCGGGC TTTATTTTCTGGATT cdsA 1249934 - 1250749 + | phosphatidate cytidylyltransferase dxr 1250740 - 1251921 + | 1-deoxy-D-xylulose 5-phosphate reductoisomerase TERM 1031 1252163 - 1252151 - g 71 -7.7 -4.13767 | GTGGCTACGTCAAAA TGCTC GGT GAGCA GGGTGGTGAACCGGC TERM 1032 1253045 - 1253067 + G 85 -6.1 -5.06735 | AGTATGCCGGGCAGT CGGCGCATG CCGGT CTCGCGCCG TTTTTATCCTTTCTC AFE_1451 1251937 - 1253295 + | membrane-associated zinc metalloprotease, putative TERM 1033 1254543 - 1254529 - g 75 -2.7 -4.99638 | AGATCGAGACAAAAA CCGTG CCGGT CCCGG GGCATCCTGACCAGT AFE_1452 1253292 - 1255637 + | outer membrane protein, OMP85 family TERM 1034 1255726 - 1255738 + G 73 -9.1 -3.95073 | AGCGTGGGCAGACCC GCCGA AGA TCGGC TTTGTGGATCTCGAC AFE_1453 1255655 - 1256191 + | outer membrane protein, OmpH family TERM 1035 1256305 - 1256317 + G 81 -5.5 -4.83169 | TCGATACAGCCGGCA GTGGG GAT CTCAC TTTTTATCACGACAT TERM 1036 1256380 - 1256402 + G 84 -12 -4.07568 | CAGGCGCCATACTGA TTGCTCCCCG GGA CGCGGAGCAA TTTTCCGGAAACCGC lpxD 1256193 - 1257254 + | UDP-3-O-3-hydroxymyristoyl glucosamine N-acyltransferase TERM 1037 1257456 - 1257468 + G 82 -9.1 -4.41616 | CCTTGCCCAGGCGGC GGCGA TCC TCGCC TTTGTTTCCGAGGAT fabZ 1257247 - 1257693 + | beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ lpxA 1257690 - 1258472 + | acyl-(acyl-carrier-protein)-UDP-N-acetylglucosamine acyltransferase AFE_1457 1258469 - 1259410 + | oxidoreductase, NAD-binding TERM 1038 1259754 - 1259768 + G 77 -3.4 -4.89852 | overlap 1259755 1259756 AAGCGGTTCTTTACG TGGGCG CCA CGCCGG TTTTTGTGGATGTGG TERM 1039 1259992 - 1260003 + G 88 -2.2 -5.5454 | AGTGGGCAGTTTTGG CGAC ATCG GTTG TTTTTCTTTCTTTCC AFE_1458 1259456 - 1260565 + | pleiotropic regulatory protein, putative TERM 1040 1260566 - 1260581 + F 76 -9 -3.96624 | ACCCTGCACGGCTAG GGCCTT GGGC AAGGCC TTTATCCTCGCGGTA TERM 1041 1260974 - 1260990 + G 78 -2.2 -5.0925 | GATCAAGCGCGTAGT GGACCA CATGC TGGTGC TTTTTCCTTTTGAGG lpxB 1260570 - 1261697 + | lipid A disaccharide synthase LpxB TERM 1042 1261869 - 1261856 - g 70 -3.1 -4.66318 | gap 1, overlap 1261859 1261860 ACGATTCCAAGAAAA TGACGG CCG CCG-CA CGGACACATTGGGCC rnhB 1261711 - 1262301 + | ribonuclease HII TERM 1043 1262982 - 1262995 + G 76 -9.5 -4.07568 | ACCCTGGACGACCCG CGCCG TCCA CGGCG TTTTACGCCGGAGCA TERM 1044 1264381 - 1264393 + G 71 -9.1 -3.72576 | TGGCGGGTTATTCCC TCGGC GGT GCCGA TTTACTGCGGCGCGC dnaE 1262301 - 1265801 + | DNA polymerase III, alpha subunit TERM 1045 1266254 - 1266272 + G 71 -6.6 -4.27584 | overlap 1266255 GCAAGGCCTTGCGTC TGCTCCGC CTT GCCGAGCG TTTTGCCTTGCCGGT accA 1265836 - 1266786 + | acetyl-CoA carboxylase, carboxyl transferase, alpha subunit TERM 1046 1267563 - 1267573 + G 100 -2.4 -5.75342 | ATACGCTTTCTGTTG CGGC ACA GCGG TTTTTTTTGCGGGGC TERM 1047 1267847 - 1267799 - g 80 -10.7 -4.07568 | GCCGCTCCGGGAAAA CCGCTGCCGATCCCCGGCTGGCA GTG CGCCATCCGGGCCACGCCACCGG CCGACCTTCATCACG tilS 1266764 - 1268158 + | tRNA(Ile)-lysidine synthetase pyrC-2 1269453 - 1268122 - | dihydroorotase, multifunctional complex type TERM 1048 1269111 - 1269094 - G 100 -7.7 -5.24129 | opp_overlap 1269094 GGCCCCGATAAAAAA TCCGTAG TTGA CCACGGA TTTTTCGGCTCCGCG TERM 1049 1269094 - 1269111 + g 76 -5.5 -4.62069 | opp_overlap 1269094 GGCCCCGATAAAAAA TCCGTAG TTGA CCACGGA TTTTTCGGCTCCGCG TERM 1050 1269232 - 1269244 + g 74 -3.4 -4.78572 | TGCCCGCGAGCCACT GGAA ATATC TTCC TTTTGTTCATTGCCG dksA 1269922 - 1269458 - | dnaK suppressor protein AFE_1466 1270089 - 1270853 + | HAD-superfamily hydrolase, subfamily IA, variant 3 TERM 1051 1270975 - 1270992 + T 78 -6.9 -4.56775 | opp_overlap 1270961, overlap 1270968 AGGCACACCGGATAT CTGCCGG GTAC CCGTCAG TTTTTGGGGGGCGGT AFE_1467 1271465 - 1270989 - | transcriptional regulator, Fur family AFE_1468 1271583 - 1272062 + | antioxidant, AhpC/Tsa family AFE_1469 1272059 - 1273468 + | PhoH family protein speA 1273533 - 1275446 + | arginine decarboxylase AFE_1470 1275839 - 1275411 - | hypothetical protein TERM 1052 1275516 - 1275500 - G 95 -15.1 -4.08216 | opp_overlap 1275494 TGATGGGTTTGAAAA CGCCCCC GTG GGGGGCG ATGGCCTCGTGTGGG AFE_1472 1276557 - 1275874 - | fumarylacetoacetate hydrolase family protein AFE_1473 1276829 - 1276554 - | hypothetical protein AFE_1474 1277446 - 1276826 - | glutathione S-transferase, putative TERM 1053 1276970 - 1276952 - G 84 -10.2 -4.19704 | overlap 1276955 GAACTCCACGTAAAA CAGCGCCG CAT CGGCGATG GAGAAGCCGCCGGTG AFE_1475 1277799 - 1277446 - | hypothetical protein AFE_1476 1278310 - 1277816 - | hypothetical protein fixX 1278616 - 1278329 - | ferredoxin-like protein fixC 1279911 - 1278613 - | fixC protein fixB 1281022 - 1279928 - | electron transfer flavoprotein, alpha subunit TERM 1054 1280383 - 1280396 + g 71 -8.1 -4.09685 | CGATGATGTCGTCTT CCTGC ATCT GCAGG TTTTCAGAAATGAAC fixA 1281884 - 1281042 - | electron transfer flavoprotein, beta subunit TERM 1055 1282112 - 1282124 + G 76 -10.5 -3.72576 | CGCGACAGAATTTGT CCGGC ACC GCCGG TTTGATGAGGCCCGG AFE_1481 1282056 - 1282154 + | hypothetical protein AFE_1482 1282389 - 1283000 + | hypothetical protein TERM 1056 1285208 - 1285220 + G 76 -9.1 -4.03234 | TCAGCACCGCGGCAT CTGGC GGT GCCAG TTTCTATCCCGGCGC AFE_1483 1283011 - 1285275 + | TonB-dependent receptor TERM 1057 1285974 - 1285995 + G 78 -2.9 -5.01811 | overlap 1285975 GCGTTTGGACTCTGG GTTGCTGCC CACC GGCACCAAG TTTTTCATTTCATCC AFE_1484 1285369 - 1286565 + | hypothetical protein AFE_1485 1286578 - 1287231 + | MotA/TolQ/ExbB proton channel family protein TERM 1058 1287276 - 1287293 + G 75 -2.7 -4.93898 | overlap 1287277 GCATCGAGATCATTC CCATGAT CGAC ATCATGC TTTTTCTGCTGGTGT AFE_1486 1287233 - 1287628 + | biopolymer transport protein, ExbD/TolR family TERM 1059 1287652 - 1287673 + G 81 -5 -4.91109 | GCGCTCCCCGCCAGC CCGCAGCC ACCCAG GGCCGTGG TTTTTCTGCTGGCCC AFE_1487 1287625 - 1288359 + | TonB family protein AFE_1488 1288372 - 1288551 + | hypothetical protein AFE_1489 1288563 - 1289594 + | iron compound ABC transporter, periplasmic iron-binding protein, putative TERM 1060 1289803 - 1289821 + G 82 -11 -3.94409 | TTTGTCCGTGTCCGG CAGCGCTT TTC AGGCGCTG TTTATGAATCCTCTG TERM 1061 1290412 - 1290439 + G 78 -4.2 -4.81083 | gap 2, opp_overlap 1290401, overlap 1290413 TAACCGGGTCCTGAT C--CCCGCCAGT GCCTTG ACTGGCGGGTTG TTTTTGGTCATTGCC TERM 1062 1290413 - 1290436 + G 100 -13.9 -4.50218 | opp_overlap 1290401, overlap 1290412 AACCGGGTCCTGATC CCCGCCAGT GCCTTG ACTGGCGGG TTGTTTTTGGTCATT AFE_1490 1289591 - 1290574 + | ABC transporter, permease protein, FecCD family AFE_1491 1290571 - 1291362 + | iron compound ABC transporter, ATP-binding protein, putative TERM 1063 1291944 - 1291954 + G 77 -8.2 -4.42386 | CATCCAGCCATTTCT CGGC AAC GCCG TTTTATGGGTACGGA TERM 1064 1293232 - 1293219 - g 74 -3.7 -4.81249 | overlap 1293221 GGCTAAACGTAAAAA CAGCC CATT GGCAG GGCATGCTGGCGGTA AFE_1492 1291388 - 1293523 + | TonB-dependent receptor TERM 1065 1294031 - 1294041 + G 83 -2.4 -5.2853 | GTGCTGGAAGGCAGG GCGG ATG CGGC TTTTATTTTTGCATC AFE_1493 1293551 - 1294270 + | molybdenum ABC transporter, periplasmic molybdate-binding protein, putative TERM 1066 1295009 - 1295055 + G 83 -2.8 -5.252 | overlap 1295010 GCGGGTGAGTATGGG ACAGGTGCTGGGCTGGAATCCC GAC GTGATTCTGGTGCAGGACCCGG TTTTTTATCGGCGTG AFE_1494 1294290 - 1295324 + | iron compound ABC transporter, periplasmic iron-binding protein, putative TERM 1067 1295678 - 1295710 + G 77 -4.1 -4.87389 | gap 1 TTGGGCATCATCCTG GGCGGAC-CCTG GTGGACGATA CAGGTGGCCGCC TTTATTTTTGGGCTG AFE_1495 1295321 - 1296346 + | ABC transporter, permease protein, FecCD family AFE_1496 1297610 - 1296408 - | cation diffusion facilitator family transporter TERM 1068 1297249 - 1297223 - G 76 -13 -3.40403 | opp_overlap 1297236 1297237, overlap 1297206 1297236 CTTCGGCCACCAGAA TGGCCGCCATGA ACC CCATGGTGGCCA GGGGATTGTCAGGTG AFE_1497 1299022 - 1297694 - | hypothetical protein AFE_1498 1300111 - 1299188 - | ABC transporter, periplasmic substrate-binding protein, putative TERM 1069 1299362 - 1299385 + g 71 -9 -3.83502 | gap 1 AGTCTGGGGTTTTCC GTCCACATTCA GGG TGAA-GTGGAC TTTGCTGTACCAGTC TERM 1070 1300989 - 1301010 + G 74 -6.6 -4.36914 | CATCGGGATACCGAC TGGTCACG AAAAGA CGTGATCA TTTTGTCGGCGGGAG AFE_1499 1300356 - 1302017 + | ATPase, AAA family AFE_1500 1302060 - 1302374 + | hypothetical protein AFE_1501 1302742 - 1302512 - | hypothetical protein AFE_1502 1303594 - 1302812 - | ankyrin repeat protein/rhodanese-like domain protein AFE_1503 1305207 - 1303591 - | nitroreductase, putative TERM 1071 1303765 - 1303754 - G 88 -3.6 -5.55664 | GCATCATCAAAAAAA CAGC CGAT GCCG GTGCCGTTCAGACCC AFE_1504 1305604 - 1305272 - | nifW protein, putative TERM 1072 1305433 - 1305421 - G 76 -9.1 -4.06491 | GCAATTTCACATAAA GCGCT TGC AGCGC CCGATCATCCAGGGC cysE-1 1306416 - 1305640 - | serine O-acetyltransferase nifV 1307592 - 1306432 - | homocitrate synthase TERM 1073 1307154 - 1307138 - G 78 -4.3 -4.77567 | opp_overlap 1307146, overlap 1307140 ACTCGCAGAACAAAA TCCAAGG GTG CCCGGGA GGCATCTTCGCCGCC iscS-2 1308793 - 1307585 - | cysteine desulfurase AFE_1508 1309671 - 1308796 - | nitrogen fixation protein nifU TERM 1074 1309093 - 1309111 + g 85 -12.4 -3.72576 | TTTCGCGGCCACCAC CGGTAGCG GCG CGCTGCCG TTTACTGCCGCGAGG AFE_1509 1310044 - 1309676 - | iron-sulfur cluster assembly accessory protein TERM 1075 1310274 - 1310252 - R 100 -13.4 -4.63527 | opp_overlap 1310252 CCAGGATGTCAAAAA CCCGGAGACC GCT GGTGTCCGGG TTTTCGCTAAAACAA TERM 1076 1310252 - 1310274 + r 100 -13.4 -4.18018 | opp_overlap 1310252 CCAGGATGTCAAAAA CCCGGAGACC GCT GGTGTCCGGG TTTTCGCTAAAACAA AFE_1510 1310895 - 1310302 - | hypothetical protein AFE_1511 1311615 - 1310962 - | nitrogen fixation protein NifQ TERM 1077 1311322 - 1311333 + g 88 -7.2 -4.96996 | ACCGGTTTCCTCATC GCGC GCGG GCGC TTTGTTTTCTTTCCC AFE_1512 1311945 - 1311637 - | ferredoxin AFE_1513 1312213 - 1311950 - | hypothetical protein AFE_1514 1312738 - 1312271 - | hypothetical protein TERM 1078 1312385 - 1312374 - G 70 -4.4 -4.54727 | opp_overlap 1312375, overlap 1312375 1312377 CTGGGGAAACCAAAA CGAT GCAC ATCG CGCAACTGTTTGTTG nifX 1313147 - 1312731 - | nitrogen fixation protein NifX nifN 1314561 - 1313200 - | nitrogenase molybdenum-iron cofactor biosynthesis protein NifN TERM 1079 1313615 - 1313627 + g 90 -4.7 -5.40072 | overlap 1313616 AGCAGGTCAGGTTCG GCGCC AAT GGCGA TTTTTTTGCCGCCGA TERM 1080 1313987 - 1313960 - G 72 -12 -3.36694 | gap 1, overlap 1313958 ATGGATCCGGAAATA TCGGGCAGGATGG TCG CC-TCCAGCCCGA AGGATTCACTGATCT nifE 1315949 - 1314558 - | nitrogenase MoFe cofactor biosynthesis protein NifE TERM 1081 1314701 - 1314715 + g 84 -3.5 -5.26119 | overlap 1314691 GGCGTTCCTGGTTGA TGTCC ACCCA GGGCA TTTTGTTTTTGAGGG TERM 1082 1315853 - 1315819 - G 77 -11.2 -3.64703 | opp_overlap 1315831 1315843 TTTGCCCCATCGAAA GCGCAACCACCGGCCG CGC CGCCCGGCTGCAGCGC CTTGGTGCAGCCTTT TERM 1083 1315843 - 1315865 + g 84 -9.8 -4.21351 | opp_overlap 1315819, overlap 1315831 CCGGCCGCGCCGCCC GGCTGCAGCG CCT TGGTGCAGCC TTTCTTGCGCTCTTT AFE_1518 1316312 - 1315968 - | ferredoxin, putative AFE_1519 1316681 - 1316337 - | ferredoxin nifK 1318302 - 1316743 - | nitrogenase molybdenum-iron protein, beta subunit TERM 1084 1316991 - 1316975 - G 76 -8.7 -4.00532 | TTGCCAAAGAGGAAA TCCACCG GCT CGGTGAA CAGCAGACTGCGCAT TERM 1085 1318373 - 1318352 - R 83 -12.9 -3.29511 | opp_overlap 1318368 GTTATCCGCCGATAA GCGGGCGGC CTGT GCCGCCCCC ACGGTGCTTACTCCC nifD 1319856 - 1318381 - | nitrogenase molybdenum-iron protein, alpha subunit TERM 1086 1318576 - 1318591 + g 71 -7.6 -4.12188 | CACGAGATCGGGCTG GATGGT TTCC ACCATC TTTTCAAACTCGTAG TERM 1087 1319915 - 1319882 - R 77 -7.3 -4.2828 | opp_overlap 1319886, overlap 1319884 CTTTAGCGAGGAAAA GAGAGGGCAGTCGCC TGAC GGCAGGTGCCCTCTA TCCATCAGACCGCAG TERM 1088 1319913 - 1319884 - R 74 -9.9 -3.745 | opp_overlap 1319886, overlap 1319882 TTAGCGAGGAAAAGA GAGGGCAGTCGCC TGAC GGCAGGTGCCCTC TATCCATCAGACCGC nifH 1320810 - 1319920 - | nitrogenase iron protein AFE_1523 1321269 - 1321655 + | response regulator TERM 1089 1322043 - 1322059 + G 71 -8 -4.07687 | TGGGTGGAGAGCCGG TTCGGG ATTGC CCCGAA TTTTCACCGGCAGGT draT 1321674 - 1322501 + | NAD(+)--dinitrogen-reductase ADP-D-ribosyltransferase draG 1322511 - 1323899 + | ADP-ribosyl-[dinitrogen reductase] hydrolase TERM 1090 1325453 - 1325489 + G 71 -7.1 -4.15044 | overlap 1325454 GCCTGATCCAGGCCA TGGACCGCTGTGGCTGG GTA CAAGCCAAAGCCGCCCG TTTATTGGGGACGAC nifA 1323925 - 1325562 + | Nif-specific regulatory protein AFE_1526 1325702 - 1325559 - | hypothetical protein TERM 1091 1325773 - 1325758 - H 77 -4.6 -4.86385 | opp_overlap 1325762, overlap 1325759 1325760 1325762 1325767 ACCTTGAAAAACAAA GGCAGC ATAT GCTGGC ATCACTTTTGCTAAA AFE_1528 1325832 - 1325933 + | hypothetical protein TERM 1092 1326267 - 1326246 - g 76 -5.7 -4.59853 | GCAAGCGGCTAAAAA GGTGCTGGC CGTG GCCTCCACC ATTCCGCAGATGACG nifB 1325956 - 1327455 + | nitrogenase cofactor biosynthesis protein NifB TERM 1093 1327462 - 1327482 + F 90 -8.2 -4.82901 | overlap 1327463 GCTGCATAAGATTGT CGGGGGAG ATCTC CTCCCCCA TTTTTGTGAAAAGGA TERM 1094 1327463 - 1327481 + F 81 -11.7 -3.49419 | overlap 1327462 CTGCATAAGATTGTC GGGGGAG ATCTC CTCCCCC ATTTTTGTGAAAAGG AFE_1530 1327506 - 1327724 + | ferredoxin TERM 1095 1327931 - 1327948 + G 71 -5.6 -4.37092 | CATTCCGGTACTGCT GGAACA GAAGAG TGTTCC TTTTCTCAACGGCGT AFE_1531 1327734 - 1328069 + | iron-sulfur cluster assembly accessory protein TERM 1096 1328200 - 1328220 + G 74 -11.9 -3.54424 | opp_overlap 1328198, overlap 1328189 CATCTCGACGATATC GATTTCCGC GGT GCGGAGATC TTTACGCGCATACCC AFE_1532 1328110 - 1328340 + | hypothetical protein AFE_1533 1328337 - 1328846 + | hypothetical protein AFE_1534 1328839 - 1329630 + | leucine rich repeat protein AFE_1535 1329627 - 1329920 + | NifZ domain protein AFE_1536 1329920 - 1330171 + | NifZ domain protein TERM 1097 1330663 - 1330685 + G 88 -2.5 -5.52384 | GTTATCGAAGCGGCT GCCATGGCG CATGA CGCGGGGGC TTTTTTTCATACGGA TERM 1098 1330734 - 1330754 + G 85 -3.2 -5.32882 | gap 1, overlap 1330737 CAAGCTGTCTGTGAA TGC-CGCCG CTTC CGGCGTGGA TTTTTTATCCTGCTC iscS-1 1330168 - 1331349 + | cysteine desulfurase AFE_1538 1331365 - 1331574 + | nitrogen fixation protein, putative AFE_1539 1331579 - 1331851 + | hypothetical protein TERM 1099 1332233 - 1332215 - g 74 -5.8 -4.43844 | TGATCACGGAGAAAA CCGGGGCG ATC CTCGCCGG CAATACCAAGGGGCA AFE_1540 1331848 - 1332990 + | aminotransferase, DegT/DnrJ/EryC1/StrS family AFE_1541 1333032 - 1333337 + | ferredoxin, putative TERM 1100 1333486 - 1333507 + G 70 -3.7 -4.62069 | gap 1, opp_overlap 1333486 1333504, overlap 1333488 GCCAATGGTTATGAA TCCCTC-TCC GGG GGAAGAGGCA TTTTTCGCCTCGAAC AFE_1542 1333348 - 1333572 + | hypothetical protein AFE_1543 1333585 - 1334412 + | hypothetical protein AFE_1544 1335315 - 1334461 - | pyrophosphorylase, putative TERM 1101 1334808 - 1334795 - G 78 -2.3 -5.01732 | overlap 1334805 AATTGTTGCAAAAAA GGCGA TAAA CCACC TAAAAAGGCCAGGTG TERM 1102 1334829 - 1334815 - G 76 -5.6 -4.72386 | overlap 1334805 1334817 TAAACCACCTAAAAA GGCCAG GTG CTGGTC GAATACCAGAACACT TERM 1103 1335363 - 1335336 - R 90 -12 -3.94877 | overlap 1335337 AGCCCGTAATAACAA TGGACCATCCGC AATG GCAGATGGTCCG TGACAGCGGTTGCAG TERM 1104 1335362 - 1335337 - R 87 -15.5 -2.96444 | overlap 1335336 GCCCGTAATAACAAT GGACCATCCGC AATG GCAGATGGTCC GTGACAGCGGTTGCA AFE_1545 1335645 - 1335439 - | molybdenum-pterin binding protein AFE_1546 1337139 - 1335712 - | succinate-semialdehyde dehydrogenase, putative TERM 1105 1337490 - 1337508 + G 71 -6 -4.42806 | GGACCTTTCCGAATC CAGGGAGA AGC TCTTTCTG TTTCTTTCCGGCTGG AFE_1548 1337338 - 1337730 + | heme-binding protein, putative AFE_1547 1339145 - 1337727 - | hypothetical protein TERM 1106 1338285 - 1338273 - G 70 -3.3 -4.6856 | GAAATAGGCGAAAAA TGCCG CTA CGCCA AAGGCCACCGCAAAC TERM 1107 1339037 - 1339014 - G 73 -5.2 -4.64766 | opp_overlap 1339026 GGCATAGGCCAAAAA CCAGACGGAT ACCC AGCGGTCTGG TTCTTTCAGGATGGC TERM 1108 1339882 - 1339872 - g 100 -2.4 -5.76949 | overlap 1339874 GATGTCGAAAAAAAA GCCG GCC CGGA TGAGAAGGCCGCACC AFE_1549 1339329 - 1339901 + | hypothetical protein AFE_1550 1339898 - 1340809 + | carbohydrate kinase, PfkB family AFE_1551 1340802 - 1342946 + | sucrose phosphate synthase TERM 1109 1344670 - 1344651 - gT 91 -7.9 -4.82667 | opp_overlap 1344651, overlap 1344644 GGACCACATCAAAAA TCTCAGC GGGCTG GCTGAGA TTTTTGGTGCCTCGG TERM 1110 1344651 - 1344670 + GT 91 -7.9 -4.7497 | opp_overlap 1344651 1344644 GGACCACATCAAAAA TCTCAGC GGGCTG GCTGAGA TTTTTGGTGCCTCGG AFE_1552 1342876 - 1345320 + | sucrose synthase, putative ogt-2 1345989 - 1345465 - | methylated-DNA--protein-cysteine methyltransferase AFE_1554 1346795 - 1346142 - | hypothetical protein TERM 1111 1346410 - 1346398 - G 85 -6.3 -5.14563 | TGCTCCAGGAAAAAA TCGAA TTT TTCGA TCACGAAACCGAAGG AFE_1556 1348044 - 1347049 - | site-specific recombinase, phage integrase family AFE_1557 1348876 - 1348643 - | hypothetical protein AFE_1558 1348464 - 1348751 + | hypothetical protein TERM 1112 1348929 - 1348966 + FH 78 -7.1 -4.56775 | gap 1, opp_overlap 1348930 1348932 1348955, overlap 1348928 1348930 TTCGATGAGTAAACT ATAGCGGCGCTAAATTAT AAA GTAAAT-AGCGCCGCTAA TTTTTAGAACAAAAT TERM 1113 1348930 - 1348965 + FH 73 -10.6 -3.33744 | gap 1, opp_overlap 1348930 1348932 1348955, overlap 1348928 1348929 TCGATGAGTAAACTA TAGCGGCGCTAAATTAT AAA GTAAAT-AGCGCCGCTA ATTTTTAGAACAAAA AFE_1559 1349087 - 1349365 + | hypothetical protein AFE_1560 1349368 - 1349706 + | hypothetical protein AFE_1561 1350692 - 1349838 - | hypothetical protein AFE_1562 1351416 - 1350694 - | hypothetical protein AFE_1563 1351907 - 1351413 - | repressor protein CI homolog TERM 1114 1351625 - 1351644 + g 81 -4.9 -4.93365 | overlap 1351639 CTGAGTGGTCCTGGT CCATCCG GGCAGA CGGAAGG TTTTTCCTTGTCAGG AFE_1564 1351989 - 1352213 + | prophage Afe02, transcriptional regulator, Cro family AFE_1565 1352265 - 1353326 + | hypothetical protein AFE_1566 1353337 - 1354197 + | DNA replication protein DnaC, putative TERM 1115 1354772 - 1354737 - g 75 -8.2 -4.19817 | gap 1 TTCATGTATCGAAAA CGGCTCGATGCGGAATC CGT GTTGCCCCA-CGAGCCG ACGTTCTCGAAAGCA AFE_1567 1354194 - 1355390 + | hypothetical protein TERM 1116 1355778 - 1355789 + G 73 -4.4 -4.59773 | overlap 1355774 AAAACCCGGCGTGGG CCTT TGCC AAGG TTTTTGACAATAAGG AFE_1568 1355387 - 1356277 + | methyltransferase, putative ssb-2 1356340 - 1356834 + | single-strand binding protein AFE_1570 1356990 - 1357133 + | hypothetical protein TERM 1117 1357425 - 1357402 - f 100 -10.4 -5.41143 | CAGGGTCTAAAAAAA CTTGCGGAAA TGAA TTTCCACAAG CAGTCTGTTTGTTGA TERM 1118 1357558 - 1357546 - f 74 -3.3 -4.91511 | overlap 1357548 ATGGGACCAGAAAAA GGCGA CGT TGGCC GGCTGGTGTACCTCC AFE_1571 1357636 - 1357788 + | hypothetical protein TERM 1119 1361180 - 1361166 - g 71 -7.8 -4.07568 | GGGTCGGCCTGAAAA CCAAGC CCG GCCTGG CGTATTGCGCCCTGC TERM 1120 1363046 - 1363030 - g 73 -4.4 -4.58395 | GGTATTCGTCAAAAA CCTGGA AAGTG TCCAAG GCGACGAGCGCGACA TERM 1121 1363926 - 1363941 + G 88 -3.2 -5.52384 | overlap 1363915 1363920 TGTCCGTGGTCGATG GTGTCG ACGT CGATGC TTTTTTTAATACCGC TERM 1122 1364312 - 1364292 - g 82 -11.9 -3.92522 | GTTTAACGGGAGAAA GTGCCATCA CCT CGATGGCAC GGGCAGTCGGGCTAC AFE_1572 1357799 - 1364395 + | hypothetical protein AFE_1573 1364395 - 1364712 + | hypothetical protein AFE_1574 1365981 - 1364998 - | hypothetical protein TERM 1123 1365104 - 1365114 + g 81 -5.4 -4.85918 | overlap 1365099 AATCGAGTATCAGAG TACG ACA CGTA TTTTGTTATATCATA AFE_1575 1368442 - 1366160 - | type I restriction-modification system, R subunit TERM 1124 1367880 - 1367860 - G 74 -5.4 -4.56775 | overlap 1367861 AGCGGGCCTGAAAAA GCTTCCAG GCGAT CTGGAAGG CGATGAAGGTTTTGC AFE_1576 1369651 - 1368452 - | type I restriction-modification system, S subunit TERM 1125 1368497 - 1368514 + g 85 -4.1 -5.31275 | overlap 1368498 1368498 GAGGGATTGTTTTAG TTCGTCG AGGG CGATGAG TTTTTTCTGGTAAAG AFE_1577 1371102 - 1369648 - | type I restriction-modification system, M subunit AFE_1578 1371575 - 1371201 - | PIN domain protein TERM 1126 1371568 - 1371541 - G 71 -6.4 -4.2349 | gap 1 TCTCCAGAGCGAAAA TGGTCGAT-CC AGACGGA GGTATCGACCA GAATCAAGCGGCAGG AFE_1579 1371769 - 1371572 - | hypothetical protein TERM 1127 1371781 - 1371800 + rH 74 -6.5 -4.23486 | opp_overlap 1371772, overlap 1371786 GCATAAGATGGACCT CATCATG GCATCA CATGATG TTATTTTAGATGCTT AFE_1580 1372264 - 1372085 - | hypothetical protein AFE_1581 1371912 - 1372154 + | hypothetical protein TERM 1128 1372137 - 1372155 + gF 76 -3 -5.00616 | overlap 1372138 1372139 1372141 GCCACCTCCGCCACC ACCAGGAG GGC CTCCTGAA TTTTTTGGCGGACCC AFE_1582 1372599 - 1373273 + | hypothetical protein AFE_1583 1373270 - 1373593 + | integration host factor, alpha subunit, putative AFE_1584 1373660 - 1373935 + | DNA-binding protein HU family protein AFE_1585 1373947 - 1374300 + | hypothetical protein TERM 1129 1374384 - 1374394 + G 84 -3.2 -5.24129 | AAGGGATGCGCGGAA TTGG TTG CCAG TTTTTTCTCAAGACC AFE_1586 1374309 - 1374530 + | DNA-binding protein, HU family AFE_1587 1374531 - 1374755 + | hypothetical protein TERM 1130 1374813 - 1374851 + F 95 -9.5 -4.83169 | opp_overlap 1374801, overlap 1374814 1374840 AAATCGCTCTCTCCG AGCCATGCCGCCCCGTT CACAA AATTGGGCTGCATGGCC TTTTTATGCCGCCGT TERM 1131 1374814 - 1374850 + F 85 -13 -3.49419 | opp_overlap 1374801, overlap 1374813 1374840 AATCGCTCTCTCCGA GCCATGCCGCCCCGTT CACAA AATTGGGCTGCATGGC CTTTTTATGCCGCCG AFE_1588 1374953 - 1375084 + | hypothetical protein dinJ 1375523 - 1375254 - | DNA-damage-inducible protein J AFE_1590 1376444 - 1375548 - | hypothetical protein TERM 1132 1377232 - 1377242 + G 88 -2.4 -5.54192 | TCCTGCTCTGGCCGG GCCG TAA CTGC TTTTTTTCGGTTAAT AFE_1591 1376706 - 1377266 + | hypothetical protein TERM 1133 1377849 - 1377880 + F 72 -12.2 -2.62983 | gap 1 GCAGCCAAGCGTGAT TGCGCCGCACTTGGG TTC CCC-GGCGCGGCGCG TCCTGTGAAGGTGGA AFE_1594 1378104 - 1378259 + | hypothetical protein AFE_1595 1379517 - 1378759 - | hypothetical protein TERM 1134 1378979 - 1378962 - G 74 -3.3 -4.7373 | CGATGTGATGAAAAA GCCCGAT GATC ACCTGGC CGACATCCCCCACGG AFE_1596 1379998 - 1379771 - | hypothetical protein AFE_1597 1380189 - 1379947 - | transposase, degenerate TERM 1135 1380278 - 1380255 - R 74 -7.4 -4.08767 | overlap 1380260 GTTACCTGGTCAAAA TTCAACGCGC ATAA GCGCGTCTAA ATGGTCAATATTGGG TERM 1136 1380273 - 1380260 - R 70 -9.5 -3.36823 | overlap 1380255 CTGGTCAAAATTCAA CGCGC ATAA GCGCG TCTAAATGGTCAATA AFE_1598 1380450 - 1380283 - | hypothetical protein AFE_1599 1380739 - 1380644 - | hypothetical protein AFE_1600 1381092 - 1380895 - | hypothetical protein TERM 1137 1381004 - 1381032 + g 89 -7.4 -5.08824 | AGGCTCGGAGTGGAT GTGGTGCCGC CTTCGTTCA GTGGCACCGC TTTTTTGCGTAGCAA AFE_1601 1381520 - 1381329 - | hypothetical protein AFE_1603 1383223 - 1382087 - | ABC transporter, permease protein, putative AFE_1604 1384360 - 1383227 - | ABC transporter, permease protein, putative TERM 1138 1383486 - 1383469 - G 75 -8.4 -4.26076 | opp_overlap 1383480 GCATGGTCAGCAAAA GGGCGA CCTGGC TCGCCC CGAGTTGGTTGCGGA AFE_1605 1385286 - 1384357 - | ABC transporter, ATP-binding protein TERM 1139 1384487 - 1384471 - G 75 -7.9 -4.15044 | CCGTTCGGCAAGAAA CCGGGGA AGC TCCTCGG CCGAAAGGCCGCCTT AFE_1606 1386247 - 1385300 - | ABC transporter, ATP-binding protein AFE_1607 1387242 - 1386247 - | secretion protein, HlyD family TERM 1140 1386869 - 1386884 + g 73 -10.4 -3.63744 | overlap 1386867 TCGGCAAGGTCGAAG CGGTCG CTCA CGACCG TGTTTTGGGCGGCGG AFE_1609 1387656 - 1387853 + | hypothetical protein TERM 1141 1388146 - 1388116 - T 84 -13.2 -3.03243 | ACGGAGGGTTCAACA CCCGCTTCGGCGAG ACG CTCGCTGTAGCGGA TGCTGACGTACTGCG AFE_1610 1389091 - 1388762 - | ISAfe7, transposase orfA AFE_1611 1390152 - 1389142 - | transposase, putative TERM 1142 1390279 - 1390262 - R 72 -4.1 -4.69622 | overlap 1390253 1390276 1390277 1390278 AGACAACCGCAAAAA GCAGCTC AACA AAACTGC GCCGCGAGCGGGGCG AFE_1612 1390361 - 1390245 - | hypothetical protein TERM 1143 1390295 - 1390276 - G 73 -4.8 -4.66318 | overlap 1390262 1390277 1390278 AGCAGCTCAACAAAA CTGCGCCG CGAG CGGGGCGG CACGACCGTCAGAAA TERM 1144 1390494 - 1390480 - R 100 -12.8 -5.03405 | AATAGCAGATAAAAA CCCGGC AGT GCCGGG CTGAATGTCTAAACT AFE_1613 1391325 - 1390753 - | hypothetical protein AFE_1614 1391790 - 1391326 - | excisionase domain protein TERM 1145 1393573 - 1393532 - g 79 -12.9 -3.53444 | gap 1 TCATGGCGGTCGAAA CCGCACGC-GGGCAGCCG GAGCGGG CGGCGGCCCTGCAGGCGG CAGCCTTGCCGGAAC TERM 1146 1394329 - 1394310 - g 77 -7.8 -4.42386 | CCGGGAGGGAGAAAA CCGGGG AGCGTCGG CCCCGG AATTGCGCCTGGCGC TERM 1147 1395991 - 1395966 - g 72 -2.6 -4.7373 | gap 2 GGATGTTATCAAAAA GCT-GGAC-GCA CTGA TGCCGCCCGAGC AGACGGTGGCAGCAC TERM 1148 1396448 - 1396433 - g 77 -8.2 -4.37092 | overlap 1396434 ACGCGCTCCAGAAAA CCCCGG ACCA CCGGGA GGGCAAGGTTATCGA AFE_1615 1392226 - 1396575 + | DNA primase TraC TERM 1149 1396941 - 1396919 - g 86 -13.4 -3.44325 | ACGCTGGAGAACGAA GCCGGCAGGA CCA TCCTGTCGGC GGACATGGGCTCCGA AFE_1616 1396634 - 1397830 + | hypothetical protein AFE_1617 1397827 - 1398105 + | hypothetical protein TERM 1150 1398293 - 1398317 + G 79 -12.3 -3.48276 | opp_overlap 1398299, overlap 1398299 GAGGCGCTGATTCGT GATGAATCACC CGA GGTGATTTATC TTCTCTCGGAAACCG TERM 1151 1398299 - 1398311 + G 77 -7.7 -4.31164 | opp_overlap 1398299, overlap 1398293 CTGATTCGTGATGAA TCACC CGA GGTGA TTTATCTTCTCTCGG AFE_1618 1398116 - 1398505 + | hypothetical protein AFE_1619 1398528 - 1399487 + | hypothetical protein AFE_1620 1399551 - 1400330 + | hypothetical protein TERM 1152 1400840 - 1400815 - g 72 -12.5 -3.05844 | gap 1 TCTGGCACCCGAAGA CCCGCTGCGGCC AGA GGCC-CTGCGGG ATATGACGCGCCGAT AFE_1621 1400330 - 1401880 + | hypothetical protein AFE_1622 1401941 - 1402057 + | hypothetical protein AFE_1623 1402091 - 1402267 + | hypothetical protein AFE_1624 1402741 - 1402920 + | hypothetical protein AFE_1625 1403110 - 1403754 + | hypothetical protein AFE_1626 1404035 - 1404139 + | hypothetical protein AFE_1627 1404365 - 1404171 - | hypothetical protein AFE_1628 1404393 - 1404533 + | hypothetical protein AFE_1629 1404550 - 1404741 + | hypothetical protein AFE_1631 1405113 - 1405412 + | hypothetical protein AFE_1632 1406259 - 1405747 - | hypothetical protein TERM 1153 1405822 - 1405799 - Gg 71 -7.6 -4.11484 | opp_overlap 1405804, overlap 1405804 CCGAATCCTCGAAAA TCAAAGAAAA CTAT TTTCCTTTGA TTGAGGGGGGGCTTT AFE_1633 1405521 - 1405826 + | hypothetical protein trbB 1406427 - 1407395 + | P-type conjugative transfer protein TrbB AFE_1635 1408583 - 1407792 - | hypothetical protein TERM 1154 1408880 - 1408895 + G 71 -5.4 -4.42788 | CATGGCGTTCGCGTC CACATC CGGC GGTGTG TTTTCTCCCATTGCG AFE_1636 1408788 - 1409174 + | hypothetical protein TERM 1155 1409508 - 1409487 - g 73 -8.7 -3.91488 | AAGGCCCCCAAAGAA CAGACGCAA AGTG CCGCGTCTG GTGGCGTGCTCAAGG AFE_1637 1409178 - 1409555 + | conjugal transfer protein TrbD, putative TERM 1156 1411175 - 1411185 + G 71 -8.2 -4.07885 | overlap 1411172 CACGTCGATGATCCG GCCG AGG CGGC TTTTGCGGCCGACTG TERM 1157 1411897 - 1411911 + G 73 -4.9 -4.65838 | TCAGTTTGGCATGGG GCCGG TCACC CTGGC TTTTTGCGGTGTCTC AFE_1638 1409555 - 1412077 + | conjugal transfer protein trbE, putative AFE_1639 1412074 - 1412337 + | hypothetical protein TERM 1158 1412498 - 1412511 + G 75 -8.1 -4.25283 | opp_overlap 1412498 TTTGCCGTCAGTGAA GTGGC CGGT GCCAC TTTTCCTGAACAGAT AFE_1640 1412420 - 1413160 + | conjugal transfer protein trbJ, putative TERM 1159 1413307 - 1413287 - g 74 -6.8 -4.32046 | opp_overlap 1413290, overlap 1413288 CGCTCAAAAAGGAAA TCGCCTTC TGCGC GAAGGCGG AAAAGGTTTCCGATA AFE_1641 1413172 - 1413426 + | lipoprotein, putative AFE_1642 1413442 - 1415211 + | conjugal transfer protein trbL, putative AFE_1643 1415204 - 1415677 + | hypothetical protein AFE_1644 1416318 - 1415851 - | hypothetical protein AFE_1645 1416552 - 1416346 - | hypothetical protein AFE_1646 1418169 - 1416685 - | serine protease, DO/DeqQ family TERM 1160 1417893 - 1417871 - G 70 -4.9 -4.49958 | AGCCCATGAAAGAAA CCAAAAAAC GGCGA GTCTTTCGG AAATGGATTAAAAAA AFE_1647 1418483 - 1418220 - | hypothetical protein TERM 1161 1418660 - 1418629 - R 83 -13.1 -3.1994 | overlap 1418651 GATATCATGGAGGAA GTGAGACCTCATG AAAATA CACGAGGCCTCAC CCCTATCGCTCAGGA AFE_1648 1419116 - 1418670 - | heat shock protein, Hsp20 family AFE_1650 1419340 - 1419477 + | hypothetical protein AFE_1649 1420206 - 1419451 - | hypothetical protein TERM 1162 1420538 - 1420500 - g 83 -4.5 -5.02074 | gap 1 GCACTCCCGAAAAAA TGCAGGC-TCTTGCGGAC CAAG GTGCACAAGCCGCCAGCA ATCTTCAGGACTTTG AFE_1651 1420394 - 1421275 + | 3-hydroxyisobutyrate dehydrogenase family protein AFE_1652 1421305 - 1423572 + | oxidoreductase alpha (molybdopterin) subunit AFE_1653 1423562 - 1423831 + | hypothetical protein fdhD-1 1423810 - 1424658 + | formate dehydrogenase family accessory protein FdhD AFE_1655 1425359 - 1424667 - | ISAfe6, transposase TERM 1163 1425650 - 1425632 - R 74 -3.1 -4.84359 | overlap 1425648 CTATGCGGACAAAAA CCGTTCG AACTG CAAACAG GAGTCCGGCAACCCT AFE_1656 1426645 - 1425617 - | ferredoxin/oxidoreductase, FAD/NAD-binding TERM 1164 1426004 - 1426016 + g 76 -6.9 -4.53303 | opp_overlap 1425998, overlap 1426005 ACCAATGAACCAACG TGGCC GCA GGCCG TTTTCTCTCAGGGTA TERM 1165 1426662 - 1426693 + r 78 -12.3 -3.25786 | ATGTGCTCATCCTTA TGCCGCTTCGTCC GTTGCA GAACGAAGCGGCG TTCCATTGTGCTATG AFE_1657 1428374 - 1426704 - | hybrid cluster protein AFE_1658 1428748 - 1429416 + | transcriptional regulator, Crp/Fnr family TERM 1166 1429474 - 1429532 + G 82 -8.8 -4.43213 | gap 1, opp_overlap 1429477, overlap 1429483 1429512 CAATACCAGGCGATA TCAGGCGACCCGGCGGCTTTGCGCTCT CTGCAT GGCGCGCAAAGGCGCCGATTCGG-TGA TTTTGATCTGTTCCG TERM 1167 1429483 - 1429524 + G 74 -12.2 -3.1944 | opp_overlap 1429477, overlap 1429474 1429512 GCGATATCAGGCGAC CCGGCGGCTTTGCGCTCT CTGCAT GGCGCGCAAAGGCGCCGA TTCGGTGATTTTGAT AFE_1660 1429450 - 1429716 + | hypothetical protein AFE_1659 1430710 - 1429682 - | hypothetical protein TERM 1168 1430548 - 1430577 + g 73 -5 -4.58395 | TACAGTACGGTACGT TGGAGAATGCCT CGCTCA ATGCAGTCTCCA TTTTTGGACGGTCAC AFE_1661 1433314 - 1430837 - | hypothetical protein TERM 1169 1432078 - 1432089 + g 70 -3.6 -4.58395 | CGGTGGCTACCCGTA GGCG TAAT TGCC TTTTTGCGGCATGCC TERM 1170 1432329 - 1432319 - G 71 -6.8 -4.18494 | overlap 1432320 CACGTCTATGCAAAA CGCA GCC TGCG CCACGGGTCGCTCAA TERM 1171 1432734 - 1432759 + g 89 -15.4 -3.32844 | opp_overlap 1432718 GCAATGGCCGTTTCA GCGGCTGCCG GGAGTG CGGCGGCCGC TTCTCCAATCCCGCG AFE_1662 1434957 - 1433317 - | NADH dehydrogenase, putative glcF 1436511 - 1435261 - | glycolate oxidase, iron-sulfur subunit glcE 1437633 - 1436521 - | glycolate oxidase, subunit GlcE glcD 1439053 - 1437587 - | glycolate oxidase, subunit GlcD TERM 1172 1438081 - 1438067 - GR 85 -12.8 -3.54424 | opp_overlap 1438067 1438069 CCCCACCGCCGGAAA GGCCGC CTT GCGGCC TTTCCAAAGCAGCAG TERM 1173 1438067 - 1438081 + gr 85 -12.8 -3.53012 | opp_overlap 1438067, overlap 1438069 CCCCACCGCCGGAAA GGCCGC CTT GCGGCC TTTCCAAAGCAGCAG TERM 1174 1438712 - 1438730 + gr 70 -6.7 -4.11692 | overlap 1438704 ATTGCGCACGCCCGG CTGAACC CGAGC GGTTCGG TTTTCCCGGTCGATG AFE_1666 1440405 - 1439068 - | hypothetical protein TERM 1175 1440285 - 1440271 - G 72 -2.1 -4.77438 | gap 1 ACTGAGGATGAAAAA GA-GCG GAGC CGCATC GCGCAGAGCGATGGC TERM 1176 1440368 - 1440383 + g 91 -7.6 -4.77567 | overlap 1440365 GAACCCGTGGGGTCG TCATCG ATGA CGATGA TTTTATTGTCGGCGT AFE_1667 1442586 - 1440418 - | transketolase pyridine binding domain protein AFE_1668 1442735 - 1443514 + | transcriptional regulator, IclR family AFE_1669 1443814 - 1444083 + | hypothetical protein TERM 1177 1444449 - 1444461 + G 71 -6.2 -4.32402 | overlap 1444446 CAGCTTCGGACCGGA CCCG TTTAC CGGG TTGTTTTCCTTGAAC AFE_1670 1444150 - 1445028 + | hypothetical protein AFE_1671 1445085 - 1445645 + | hypothetical protein AFE_1672 1445713 - 1446750 + | dihydroorotase, homodimeric type TERM 1178 1447601 - 1447571 - g 100 -14.7 -4.67048 | opp_overlap 1447571 1447570, overlap 1447572 CCATCCGAAAACAAA TCCTGCCGCGCCA GATAT TGACGCGGCAGGC GTTTGAAAACGCCAT TERM 1179 1447571 - 1447601 + G 73 -13.2 -2.71791 | opp_overlap 1447571 1447572, overlap 1447570 CCATCCGAAAACAAA TCCTGCCGCGCCAG ATA TTGACGCGGCAGGC GTTTGAAAACGCCAT TERM 1180 1447600 - 1447572 - g 95 -18.2 -3.39506 | opp_overlap 1447571 1447570, overlap 1447571 CATCCGAAAACAAAT CCTGCCGCGCCA GATAT TGACGCGGCAGG CGTTTGAAAACGCCA TERM 1181 1448049 - 1448059 + G 73 -4.6 -4.65895 | opp_overlap 1448043 GCACAAAATCACCGG TCCG GCA CGGG TTTTTGAATCCGAGG TERM 1182 1448426 - 1448446 + G 76 -9.6 -4.08767 | opp_overlap 1448422, overlap 1448444 TCTGGCAAGCACCCG CACCGCGC CACAC GCGCGGCG TTTTGGCGAAGTACG ilvD-1 1446832 - 1448505 + | dihydroxy-acid dehydratase AFE_1674 1449495 - 1448509 - | Sua5/YciO/YrdC family protein bioD-1 1450445 - 1449690 - | dethiobiotin synthetase TERM 1183 1450038 - 1450018 - G 75 -13.9 -2.83715 | opp_overlap 1450031 GCTACTACCAGCACA GGCAGCCGC AGT GCGGCGGCC AAGTCGGCGTTGGTG AFE_1676 1451656 - 1450475 - | fructose-bisphosphate aldolase class II family protein AFE_1677 1454133 - 1451782 - | von Willebrand factor type A domain protein TERM 1184 1452582 - 1452601 + g 71 -7.8 -4.14243 | overlap 1452583 CATGGATGGTCTCCA ACGTGCCA CTCT TGGCACGC TTTTCCAGTACGGTG p30 1454952 - 1454149 - | p30 protein AFE_1679 1455237 - 1454983 - | hypothetical protein AFE_1680 1455863 - 1455228 - | hypothetical protein TERM 1185 1455491 - 1455471 - G 72 -12.5 -3.06133 | overlap 1455459 CAAGCCTGGATTCAA GCGCCGGAC TCC GCCCAGCGC TGCCGCCATCCCCAC AFE_1681 1456178 - 1455900 - | hypothetical protein bfr 1456618 - 1456175 - | bacterioferritin cscE 1456970 - 1456632 - | carboxysome shell peptide cscD 1457318 - 1457016 - | carboxysome shell peptide cscC 1457653 - 1457357 - | carboxysome shell peptide cscB 1457951 - 1457685 - | carboxysome peptide B cscA 1458210 - 1457962 - | carboxysome peptide A TERM 1186 1458100 - 1458120 + g 93 -8.2 -4.98531 | overlap 1458092 TCCCACCGCATCCAC GGCGATGC TTCTT GCACCGCC TTTTTCCTTTACCAC cab2 1459808 - 1458207 - | carboxysome shell carbonic anhydrase TERM 1187 1459553 - 1459584 + g 76 -13 -3.32268 | opp_overlap 1459535, overlap 1459536 1459554 1459580 CTGCGAAGTGCCCCT TCACCGCCTGTTCG TGGG CCAGCAGGCGGTGG TTCTCCAACTCATTG TERM 1188 1459554 - 1459583 + g 76 -14.3 -2.59039 | opp_overlap 1459535, overlap 1459536 1459553 1459580 TGCGAAGTGCCCCTT CACCGCCTGTTCG TGGG CCAGCAGGCGGTG GTTCTCCAACTCATT AFE_1689 1462152 - 1459864 - | Tat (twin-arginine translocation) pathway signal sequence domain protein cbbS-2 1462567 - 1462235 - | ribulose bisphosphate carboxylase, small subunit TERM 1189 1462587 - 1462621 + r 75 -12.7 -2.5893 | overlap 1462586 1462609 TATTCCTTTCTTTGG CGCGCGGAGCGAGCC GTCAA GCCTCGCGCCACGCG GGTTTTCGTTTGCGC TERM 1190 1462609 - 1462623 + r 89 -9.2 -4.55128 | overlap 1462587 1462586 AGCGAGCCGTCAAGC CTCGCG CCA CGCGGG TTTTCGTTTGCGCCT cbbL-2 1464080 - 1462659 - | ribulose bisphosphate carboxylase, large subunit TERM 1191 1464350 - 1464378 + G 78 -4.4 -4.74801 | GTCCATTCAGGTCCG GCAACTCGCCGA GGCAG TCGGCCAGCCGC TTTTTAATCAGATTG cbbR 1464153 - 1465151 + | rubisco operon transcriptional regulator AFE_1693 1465595 - 1466452 + | hypothetical protein TERM 1192 1466675 - 1466704 + F 95 -14.3 -3.28712 | opp_overlap 1466684 GGAATCATTTGTAGG CTGGCATAAGGCG ACGC CGCCTCATGCCGG TTATCCCCCCAACCC TERM 1193 1466730 - 1466754 + F 74 -8.6 -4.04806 | AACCCTCGATCTATA CCCTTTCAGG AATCA TCTGAGAGGG TTATTTCATGTCGAG AFE_1694 1466762 - 1467430 + | conjugal transfer protein TERM 1194 1468408 - 1468435 + G 77 -11.2 -3.62096 | TACCTTCATCGACAT GCCTCAGGGGCT GGCG AGCCACGGAGGC TTTCCCATCCTGCAA AFE_1695 1467443 - 1468588 + | conjugal transfer protein AFE_1696 1468590 - 1469591 + | conjugal transfer protein, putative TERM 1195 1469668 - 1469642 - f 100 -10.9 -4.96501 | gap 1, overlap 1469643 1469665 CTCCAGAAAAAGAAA GGGCTGCT-CCC GGCA GGGCAACAGCCC GCCGCGGATAGCCGC TERM 1196 1469745 - 1469687 - f 95 -15.1 -3.59262 | overlap 1469665 1469705 GCGGATAGCCGCAAA GGCCCTGGCGGGCAGCAAGACCCTGGC GGGCA GCAAGGCCCTTGCAGGCCGCAAGGCCC TAGCAGGCCGCAAGG TERM 1197 1469763 - 1469705 - f 93 -15.8 -3.14132 | overlap 1469687 CCTGGCGGGCAGCAA GACCCTGGCGGGCAGCAAGGCCCTTGCA GGC CGCAAGGCCCTAGCAGGCCGCAAGGCCC ACAAGCCAGTCAGCT TERM 1198 1470241 - 1470207 - f 80 -9.1 -4.07568 | opp_overlap 1470207 1470207, overlap 1470208 GCCTTGCCTGGAAAA CGCCGGAGTCAACGC CGTCT GCGCAGGCCCCGGCA GTTCTCCCTACGGCC TERM 1199 1470357 - 1470322 - f 81 -3.8 -5.28166 | gap 1, overlap 1470325 GAAAACGAAGAAAAA GACCCCGCCGCCCCTGG TGA CCCGGGA-GACGAGCCC CTACGAGATTCTTTC AFE_1698 1471391 - 1472062 + | conjugal transfer -like protein TERM 1200 1472158 - 1472181 + G 79 -13.1 -3.42056 | opp_overlap 1472155 1472158 GCAGGCTCAAGACGA CGCTCGCCG GCGTTG CGGCGGGCG TTCTCGGTTACACGT AFE_1699 1472073 - 1474577 + | TraG/TraD family protein AFE_1700 1474687 - 1474881 + | hypothetical protein AFE_1702 1475395 - 1475207 - | hypothetical protein TERM 1201 1475325 - 1475305 - G 81 -4.5 -4.96848 | opp_overlap 1475309 1475310 1475323 TCTGGTATAGAAAAA CCAGGTCTG GGT CTGCCCCGG AATATTCGTTGATAA AFE_1703 1475625 - 1475398 - | hypothetical protein AFE_1704 1475839 - 1475603 - | hypothetical protein AFE_1705 1475927 - 1476058 + | hypothetical protein TERM 1202 1476116 - 1476140 + TF 100 -15.7 -3.53012 | opp_overlap 1476111 1476108 ACCACAACCACCCCC GCCTGGTCCTC CCG GTGGACCAGGC TTTGGGCCCCCAGGG TERM 1203 1476615 - 1476593 - Tf 84 -6.2 -5.08255 | opp_overlap 1476593, overlap 1476588 ACGGCCAAAACAAAA CGAGCCGC TCATCAT GGGGCTCG TTGTTTGGTACTCTT TERM 1204 1477004 - 1477034 + GT 100 -12.4 -4.65933 | overlap 1477006 CCGGAAGGGCAAGGT CCCGCAGCTCGCGC TTG GCGCGAGGCGCGCG TTTATTTTGGCACTA TERM 1205 1477006 - 1477032 + GT 78 -13.6 -2.62579 | overlap 1477004 GGAAGGGCAAGGTCC CGCAGCTCGCGC TTG GCGCGAGGCGCG CGTTTATTTTGGCAC TERM 1206 1477113 - 1477087 - gT 73 -5.1 -4.56597 | gap 2, overlap 1477088 GGCCCCCTGGAAAAA GCGTGCGCAGGCC TAT GGCCTG-GC-CGA CAGCGCAACACTGCC TERM 1207 1479066 - 1479053 - gT 95 -3.1 -5.69262 | gap 1 GTACAAAAAGAAAAA TGCACC CCC GG-GCA ACAGCTTTTGGATGC AFE_1706 1481406 - 1479769 - | ISAfe4, transposase orf3 TERM 1208 1479794 - 1479816 + Gg 85 -3.4 -5.4505 | overlap 1479795 GCAGATTTTTTCCAG TTCCACGG CAAGAGT TCGTGGAG TTTTTTGTTGGGCCA AFE_1707 1476740 - 1479913 + | sensory box-containing diguanylate cyclase, putative AFE_1708 1481803 - 1481456 - | ISAfe4, transposase orf2 AFE_1709 1482126 - 1481794 - | ISAfe4, tranposase orf1 AFE_1710 1482240 - 1482662 + | hypothetical protein AFE_1711 1483356 - 1482799 - | hypothetical protein AFE_1712 1485677 - 1483680 - | diguanylate cyclase, putative TERM 1209 1485801 - 1485774 - R 70 -9.9 -3.34398 | gap 1, overlap 1485772 1485776 1485800 TTCCGGCCGCAAAGA CA-CCTTGCCGC GAGGG GCGGCAAGGACG CTCATCAGCACATTA TERM 1210 1485798 - 1485776 - R 95 -14.9 -3.24232 | overlap 1485774 1485772 CCGGCCGCAAAGACA CCTTGCCGC GAGGG GCGGCAAGG ACGCTCATCAGCACA TERM 1211 1486220 - 1486201 - R 70 -3.4 -4.69622 | opp_overlap 1486201 AGATAATCGTAAAAA GCGTGGGC AAGC GCCGATGC TTCTTTATCCAAGGC AFE_1713 1486499 - 1486371 - | hypothetical protein TERM 1212 1486605 - 1486615 + rH 78 -6.8 -4.56597 | overlap 1486599 1486599 GCGCTTTTTCGTTAC GCTG TAA CAGC TTTTTACAGAACACC AFE_1714 1486932 - 1486744 - | hypothetical protein AFE_1715 1486885 - 1487013 + | hypothetical protein AFE_1716 1488069 - 1487170 - | GTP-binding protein AFE_1717 1488654 - 1488397 - | hypothetical protein AFE_1718 1488207 - 1488497 + | hypothetical protein AFE_1719 1489991 - 1488738 - | parB family protein AFE_1720 1490763 - 1489993 - | parA family protein AFE_1721 1491182 - 1490742 - | hypothetical protein TERM 1213 1491237 - 1491255 + H 81 -11.8 -3.55203 | CAGCGCCGGGCCAGA TCGTCTAC CGG GTAGACGA TTTACGAAGGCTTTT AFE_1722 1491312 - 1491680 + | hypothetical protein AFE_1723 1492689 - 1491691 - | oxidoreductase, aldo/keto reductase family AFE_1724 1492849 - 1492941 + | hypothetical protein TERM 1214 1493294 - 1493270 - f 76 -5.6 -4.72272 | CCGGCGCAGGAAAAA TGCTGCGGGA CTATC TCGCGCTGCA GCCGGATCTGGCCGC AFE_1725 1493950 - 1496079 + | sensory box-containing diguanylate cyclase, putative AFE_1726 1496751 - 1496206 - | conjugal transfer protein TraF, putative TERM 1215 1497056 - 1497044 - gH 80 -9.1 -4.10429 | AATGAGGCCGGAAAA GGCGA TCA TCGCC ATATAAATGGTCGGG AFE_1727 1496723 - 1497163 + | hypothetical protein AFE_1728 1497144 - 1497485 + | hypothetical protein AFE_1729 1497624 - 1497493 - | hypothetical protein AFE_1730 1497931 - 1497668 - | hypothetical protein AFE_1731 1499350 - 1498010 - | conjugal transfer protein TraB, putative TERM 1216 1499118 - 1499092 - G 73 -4.4 -4.71426 | gap 1, opp_overlap 1499075 CGTGTAGGAAGAAAA CCGACGTGCCT TTGATG AGGC-CGTAGG TCGTCGCCAGGTGGT TERM 1217 1499450 - 1499406 - H 82 -11.5 -3.8766 | gap 3, overlap 1499407 GTAGACGATAGGAAA CCGTGC--CCCCCT-CCTGGCC TACG GGCCAGGAAGGGGAATGCGCGG GCATATGTTCAAAGC TERM 1218 1499445 - 1499407 - H 81 -13.9 -2.92114 | gap 1, overlap 1499406 TAGACGATAGGAAAC CGTGCCCCCCTCCTGGCC TACG GGCCAGGAAGGGGA-ATG CGCGGGCATATGTTC TERM 1219 1499687 - 1499676 - g 74 -7.2 -4.4009 | opp_overlap 1499676 GGTTAGGTCAGAAAA CCGG ACAA CCGG TGCGGTTCGATAGGC AFE_1732 1499609 - 1499839 + | hypothetical protein AFE_1733 1499851 - 1500294 + | hypothetical protein AFE_1734 1500400 - 1500696 + | hypothetical protein AFE_1735 1501168 - 1500938 - | hypothetical protein TERM 1220 1501053 - 1501071 + g 89 -11.8 -4.17762 | overlap 1501056 1501057 CTTTTTTGGGCGTTT TCGTCTAC CCG GTAGACGA TTCTTTTGGGCAGTG AFE_1736 1501406 - 1501146 - | hypothetical protein TERM 1221 1501323 - 1501356 + g 72 -11.1 -3.31247 | gap 1, opp_overlap 1501324 1501326, overlap 1501321 1501319 1501351 TGTCCTGCGGGAAAA ACG-CGGATCGTCTAC CCG GTAGACGATTCGGCGA TGTCGTTTTTTTCGG TERM 1222 1501355 - 1501324 - G 100 -12.4 -4.56597 | gap 1, opp_overlap 1501323 1501321 1501319 1501351, overlap 1501326 GTCCTGCGGGAAAAA CG-CGGATCGTCTAC CCG GTAGACGATTCGGCG ATGTCGTTTTTTTCG TERM 1223 1501352 - 1501326 - G 72 -13.8 -2.60032 | opp_overlap 1501323 1501321 1501319 1501351, overlap 1501324 CCTGCGGGAAAAACG CGGATCGTCTAC CCG GTAGACGATTCG GCGATGTCGTTTTTT TERM 1224 1501351 - 1501361 + g 90 -4.6 -5.40072 | opp_overlap 1501326 1501324, overlap 1501323 1501321 1501319 1501359 ACCCGGTAGACGATT CGGC GAT GTCG TTTTTTTCGGAAAGA TERM 1225 1501359 - 1501379 + g 74 -5.5 -4.55689 | overlap 1501319 1501351 GACGATTCGGCGATG TCGTTTTTT TCG GAAAGACGA TTTTATATCAGTAGT AFE_1737 1501536 - 1501387 - | hypothetical protein topB 1503685 - 1501586 - | DNA topoisomerase III TERM 1226 1501774 - 1501790 + g 71 -5.7 -4.36914 | overlap 1501779 GCTTCTTGCAGTCCG GGCAGGC GGG GCCAGTC TTTTGTCCGACGCCC TERM 1227 1502282 - 1502296 + g 93 -7.8 -5.00616 | ATCTGCATCCTGGAC GGTCAG GAC CTGGCC TTTTTTGAGCGCCGG TERM 1228 1503385 - 1503425 + g 77 -15 -2.71681 | gap 2, opp_overlap 1503374 1503392 CAGACGAGGCTTTCT TGA-GC-AAGGCCCGGATCA CCT TGATCTGGGCCTTGGCGTCA TCCTTCGCCCGCTTC TERM 1229 1503416 - 1503392 - G 82 -14.3 -3.14132 | opp_overlap 1503385, overlap 1503374 GGCTTTCTTGAGCAA GGCCCGGATCA CCT TGATCTGGGCC TTGGCGTCATCCTTC AFE_1739 1503915 - 1503724 - | hypothetical protein TERM 1230 1504737 - 1504752 + r 70 -5.4 -4.45077 | gap 1, overlap 1504749 TTGTCTCGTTTCTCT CCGCCTC TTG GAG-CGG TTTTCCTGCTTTTTG AFE_1740 1506211 - 1504835 - | phospholipase D family protein TERM 1231 1505366 - 1505386 + g 79 -9.7 -4.20367 | GGGTCTGCTCCCTAT GGCCATGAC GTA GTCATCGCC TTCTTTCTTGAGAGG AFE_1741 1508077 - 1506248 - | sigma-54 dependent transcriptional regulator AFE_1742 1508468 - 1509988 + | aldehyde dehydrogenase (NAD) family protein TERM 1232 1510026 - 1510049 + F 77 -8 -4.08767 | opp_overlap 1510012 ACGTCAAGGCGACTT GCGGGGGCGG GCAA TCGCTCCCAC TTTTGAAAAGGTGAA AFE_1743 1510065 - 1510436 + | hypothetical protein AFE_1744 1510976 - 1510884 - | hypothetical protein AFE_1745 1511598 - 1511065 - | hypothetical protein AFE_1746 1511879 - 1511742 - | hypothetical protein TERM 1233 1512465 - 1512453 - gR 71 -6.2 -4.3739 | CACTTGCGCACAAAA CCGC AGCGG GCGG ACAGGCGTCAATGGG AFE_1748 1513283 - 1512696 - | hypothetical protein AFE_1749 1512347 - 1512931 + | hypothetical protein umuD 1513246 - 1513740 + | umuD protein TERM 1234 1514487 - 1514469 - g 79 -12.4 -3.55444 | opp_overlap 1514455 TCGCCATGGTGGAAA TCCCGCCG CCC CGGCAGGA GATTCAATCCTCGCG AFE_1751 1513748 - 1515031 + | umuC protein TERM 1235 1516081 - 1516091 + G 71 -8.2 -4.14243 | overlap 1516080 CTGGCCGGCAATCTC GGGG TAC CCCC TTTTGCGATACACTC AFE_1752 1515103 - 1516281 + | hypothetical protein TERM 1236 1516382 - 1516405 + F 100 -11.8 -4.56775 | opp_overlap 1516404 TAGCATGTATATGCA GCTTCTGGAT ATCG GTCCAGAAGC TTTTTAGGAAAAACT TERM 1237 1516515 - 1516505 - g 74 -6.8 -4.35483 | GCTGATCAGAAGAAA CCCT TGC AGGG TGGTGCAACCCTTCC TERM 1238 1516828 - 1516838 + G 81 -4.6 -5.0133 | GAGTATCGGGCTTTT GGGC GCG GCTC TTTTTTACGGAGATG kup 1516487 - 1518421 + | potassium uptake protein AFE_1754 1518552 - 1518866 + | virulence-associated protein, putative TERM 1239 1519088 - 1519069 - f 83 -10 -4.13945 | opp_overlap 1519069 ACCGGTATCGCAAAA CCACCTAC CGCA GCAGGTGG TCATGTCAGTTGATC TERM 1240 1520083 - 1520120 + G 80 -3.5 -5.06451 | overlap 1520085 TGATATGCCCTCATT TTTTCAAGGTTCTTTTG GAAC TAACAGCACCTTGAACA TTTTTTACAATGATA AFE_1755 1520072 - 1520764 + | hypothetical protein AFE_1756 1520975 - 1520790 - | hypothetical protein AFE_1757 1521363 - 1521058 - | hypothetical protein AFE_1758 1521773 - 1522300 + | hypothetical protein AFE_1759 1522636 - 1522505 - | hypothetical protein TERM 1241 1522575 - 1522561 - G 83 -2.8 -5.23292 | opp_overlap 1522566, overlap 1522563 CCAGATAAAACAAAA TGTTAG GCG CTACCA TGAGCGCCTTTATTT TERM 1242 1522566 - 1522583 + g 93 -8.4 -5.02777 | opp_overlap 1522561 1522563 TAAAACAAAATGTTA GGCGCT ACCATG AGCGCC TTTATTTTTCTCTGT mutS 1525412 - 1522800 - | DNA mismatch repair protein MutS AFE_1761 1525673 - 1525437 - | hypothetical protein AFE_1762 1525721 - 1525981 + | hypothetical protein TERM 1243 1527166 - 1527180 + G 82 -9.2 -4.43221 | CGTCTTTGATGAAGG CCGCCT CGT GGGCGG TTTTATGGACTGTTT AFE_1763 1526033 - 1527241 + | glycosyl transferase, group 1 TERM 1244 1527385 - 1527373 - T 76 -10.5 -3.64822 | ATGGTGGGATGCAAA GGCCG ATG CGGCC CCTGGGGATGACCGC TERM 1245 1527467 - 1527436 - T 81 -12.3 -3.61398 | overlap 1527437 TTGCTTTCGGAAGAA TCGTCCTTCCCGC CGCGGC GCAGGAAGGACGC CGGGATCAATTGCGG TERM 1246 1527466 - 1527437 - T 86 -15.8 -2.76696 | overlap 1527436 TGCTTTCGGAAGAAT CGTCCTTCCCGC CGCGGC GCAGGAAGGACG CCGGGATCAATTGCG AFE_1764 1528165 - 1527473 - | hypothetical protein TERM 1247 1528202 - 1528212 + H 70 -5.4 -4.43221 | opp_overlap 1528202 ACGCCGCTAGCATAA CGTA AAT TACG TTTTCTCGCCTCTTT TERM 1248 1528283 - 1528261 - H 80 -9.8 -3.96447 | overlap 1528263 GGAGGAAAAAAGCAA TACCCGGACA AAG TGGCCGGGCA AACAATGAGATGCTG TERM 1249 1528281 - 1528263 - H 74 -10.2 -3.55478 | overlap 1528261 AGGAAAAAAGCAATA CCCGGACA AAG TGGCCGGG CAAACAATGAGATGC AFE_1765 1528273 - 1528413 + | hypothetical protein AFE_1767 1528394 - 1529056 + | exodeoxyribonuclease X, putative AFE_1766 1529655 - 1529029 - | hypothetical protein TERM 1250 1529506 - 1529471 - G 70 -4.6 -4.46212 | overlap 1529473 1529504 GCGGTGATCAGAAAA CCGCCGCGGCAACG ACAGCTCA CGTTGCCGAAACCG ATGCCGCCGTAGCGG AFE_1768 1529724 - 1530083 + | hypothetical protein AFE_1769 1533933 - 1530100 - | oxidoreductase, FAD-binding, putative TERM 1251 1530534 - 1530544 + g 75 -8.2 -4.1899 | CCTCCACACCATCGA GGGC GAC GCCC TTTTCCATCAGGTAC TERM 1252 1530914 - 1530935 + g 70 -5.1 -4.46212 | TCCGCCACTTTGGCG CTGTCCC GGATGATG GGGACGG TTTTATCGTCGACGA TERM 1253 1532500 - 1532558 + g 71 -7.9 -4.11751 | gap 1, opp_overlap 1532489, overlap 1532501 AATACGTACCACCGC CGCTGCTGCTGCGCCGGCCGCACCGGGG TCGT CACTGGCGATATCGGCG-AGCAGCAGCA TTTTCGGGCGTTCGT panC 1534769 - 1533933 - | pantoate--beta-alanine ligase panB 1535556 - 1534771 - | 3-methyl-2-oxobutanoate hydroxymethyltransferase TERM 1254 1535043 - 1535026 - G 77 -11.3 -3.66908 | overlap 1535022 1535029 1535030 CGCTTCCAAAACCAA GAAGCGG GCAC CCGCTTC CGCCAGTGCGCCGGC TERM 1255 1535269 - 1535283 + g 74 -3.4 -4.77157 | overlap 1535256 1535254 TACCGCCGCAGCCCA GGCCTG CTC CGGTCC TTTTTCATAGCTTCC AFE_1772 1536160 - 1535549 - | deoxyguanosine kinase/deoxyadenosine kinase, putative TERM 1256 1536116 - 1536130 + g 72 -12.8 -3.10894 | AAGGCTGGTTTTACC GGCCCC CAT GGGGCC TTCGATGCTGATGAT AFE_1774 1538034 - 1536682 - | polyA polymerase family protein pcnB 1539489 - 1538056 - | polyA polymerase AFE_1776 1540646 - 1539684 - | glycosyl transferase TERM 1257 1540779 - 1540805 + H 100 -13.6 -4.46854 | opp_overlap 1540778 1540794 AATGCCTTGAACCAT GGGGCTGGGACG CAA TGGCCCGGCCCC TTTCTTGTTAGGTGA guaB 1540827 - 1542287 + | inosine-5'-monophosphate dehydrogenase TERM 1258 1542909 - 1542960 + G 74 -11.5 -3.53444 | gap 2, overlap 1542955 TCTTATGTGGACACG GCAGTGGCGACGATCCGTGCCCAGG TGGG CAAGGGC-CGGGTCATCGCCGC-GC TTTCCGGCGGGGTGG guaA 1542291 - 1543835 + | GMP synthase TERM 1259 1544081 - 1544032 - g 71 -6.9 -4.1822 | gap 1, opp_overlap 1544044 1544045, overlap 1544033 CCTGACTGTAAGAAA TGTGCCGGATGACGTGCATCGCGC TTT GCGCG-TGCGGGCGGCCCGGCACG GTCGCAGCACGGAAG AFE_1779 1544009 - 1544263 + | plasmid stability protein, putative AFE_1780 1544264 - 1544683 + | plasmid stability protein, putative AFE_1781 1544701 - 1544913 + | transcriptional regulator, AbrB family TERM 1260 1545920 - 1545946 + G 70 -3.5 -4.58283 | overlap 1545912 1545924 CATGGATGATCGGCG CCTTCGCCATC CTTTT GCTGGCGCTGG TTTTTGCGGAACTTG TERM 1261 1546462 - 1546452 - g 72 -2.4 -4.84527 | overlap 1546453 TGGAGAGAGTAAAAA TCCG AAA CGGG ATGTGCCGATCGCCG AFE_1782 1545748 - 1547367 + | amino acid permease family protein proB-2 1547506 - 1548657 + | glutamate 5-kinase AFE_1784 1551408 - 1548733 - | mechanosensitive ion channel family protein TERM 1262 1550499 - 1550484 - G 74 -6.2 -4.56597 | CCTTCTGGGCAAAAA TGGAAT GTTC ATTCCA GGTAAGCCAGAAATG AFE_1785 1551423 - 1551740 + | hypothetical protein AFE_1786 1552591 - 1551767 - | hypothetical protein TERM 1263 1552042 - 1552055 + g 85 -2.3 -5.40072 | ATAGTTCGCGACCGA TACGC CAGC GCGAA TTTTTTTCGGCGGCC TERM 1264 1552360 - 1552334 - G 71 -8.6 -4.03413 | opp_overlap 1552343 1552345 ATCCGGCCAGACAAA GAGCACGTACCG GCG CAGCGCGTGCCC GTGCTGTACCTCTTC TERM 1265 1552687 - 1552705 + H 78 -13.2 -2.54586 | overlap 1552686 1552684 1552689 GTATTATCCCCCGGG TACCTGCC CAG GGCAGGTA ATGTTGCGTTTTCAG AFE_1787 1552730 - 1553365 + | Sua5/YciO/YrdC/YwlC family protein AFE_1788 1553416 - 1554075 + | membrane-associated zinc metalloprotease, putative TERM 1266 1554969 - 1554931 - g 90 -4.4 -5.40072 | overlap 1554933 TGGTTCGGAAAAAAA TACGTACCATGCCCACCG ATC CGGCACGGGTGGCACGCA CGGATCCTGGCACGC trpS 1554075 - 1555286 + | tryptophanyl-tRNA synthetase scpA 1555267 - 1556088 + | segregation and condensation protein A TERM 1267 1556504 - 1556521 + G 71 -5.5 -4.39002 | overlap 1556505 1556506 GGGTCGCCCCGCGCT TTGGGTG ACAA CACCCGG TTTTCTGGAGCATTT scpB 1556088 - 1556621 + | segregation and condensation protein B AFE_1792 1556784 - 1558088 + | sulfide-quinone reductase, putative TERM 1268 1558111 - 1558133 + F 100 -10.5 -5.64274 | opp_overlap 1558111 1558112, overlap 1558113 GTTGGTCAGTGAAAA TGCCCCCGC CTGGT GCGGGGGTG TTTTTTTATAGGTGC TERM 1269 1558113 - 1558131 + F 100 -13.1 -4.46105 | opp_overlap 1558112 1558111, overlap 1558111 TGGTCAGTGAAAATG CCCCCGC CTGGT GCGGGGG TGTTTTTTTATAGGT TERM 1270 1558485 - 1558510 + G 74 -12.5 -3.18274 | opp_overlap 1558457 CCCACGGTTTTTGAT CGCCTGCCGCG ATTG CGCGGTAGCCG TTGGATTGCGGTAGG rluB 1558212 - 1559090 + | ribosomal large subunit pseudouridine synthase B TERM 1271 1559329 - 1559342 + GF 77 -8.1 -4.09685 | ATCTGGCGGAACTGC TCCGG CCAT CCGGA TTTTACCGGATAAAG AFE_1794 1559100 - 1559771 + | base excision repair protein, HhH-GPD family AFE_1795 1560347 - 1560075 - | hypothetical protein AFE_1796 1559740 - 1560156 + | hypothetical protein AFE_1797 1561866 - 1560355 - | drug resistance transporter, EmrB/QacA family TERM 1272 1560418 - 1560403 - G 72 -2.5 -4.78107 | CATCACGACCAAAAA GCTCC AGAACA GGAAC ATGAACGCATCCAGT TERM 1273 1561142 - 1561125 - G 89 -4.8 -5.24799 | GTACAAAGAGAAAAA TGCCGG TGCCCG CCGACA ACATCAGGATGATGA TERM 1274 1561828 - 1561838 + g 77 -8.2 -4.41241 | opp_overlap 1561827 AATGGCGAGAAGATG CGGG CTG CCCG TTTTATCGAAATTTC AFE_1798 1562447 - 1561890 - | hypothetical protein TERM 1275 1562079 - 1562055 - G 89 -9.9 -4.64861 | CCCGCTGAAAATAAA CCACCCCCGTC CGT GACCGGCGTGG ACATTGGACTGGGTG AFE_1799 1564985 - 1562460 - | alpha-glucan phosphorylase family protein AFE_1800 1565392 - 1565042 - | enolase domain protein pyk 1566828 - 1565404 - | pyruvate kinase AFE_1802 1567748 - 1566828 - | fructose-bisphosphate aldolase, putative AFE_1803 1569138 - 1567741 - | pyridine nucleotide-disulfide oxidoreductase AFE_1804 1569356 - 1569192 - | hypothetical protein AFE_1805 1569538 - 1569338 - | hypothetical protein TERM 1276 1569940 - 1569923 - g 75 -7.7 -4.2349 | gap 1 GGGGCATATCGAAAA GCCC-GAC TGG GTCCGGGC GACCTACTGGTACCA AFE_1806 1569699 - 1570100 + | hypothetical protein TERM 1277 1570192 - 1570210 + T 100 -11.7 -5.0538 | CCCATACCTCCCTTT GGCCCTC CTCGC GAGGGCC TTTTTTGGGGTACCC AFE_1807 1571185 - 1570226 - | carbohydrate kinase, PfkB family AFE_1808 1572105 - 1571182 - | phosphate acetyl/butyryl transferase AFE_1809 1573629 - 1572130 - | major facilitator family protein TERM 1278 1572833 - 1572845 + g 85 -3.3 -5.40072 | overlap 1572808 1572834 CCGGGACGGATCTTG GCCAC ATG GTGGA TTTTTTTGCCCAGAC TERM 1279 1573095 - 1573082 - G 71 -5.9 -4.39889 | overlap 1573084 AGAACCAGAGCAAAA CCGGC ACCT GCCAG CATGCCCACGGATTG ackA 1574810 - 1573626 - | acetate kinase AFE_1811 1576081 - 1574813 - | 2-oxo acid dehydrogenase, acyltransferase, putative AFE_1812 1577070 - 1576078 - | dehydrogenase complex, E1 component, beta subunit, putative AFE_1813 1578131 - 1577067 - | dehydrogenase complex, E1 component, alpha subunit, putative TERM 1280 1577723 - 1577683 - G 75 -8.2 -4.28548 | overlap 1577715 1577720 AGGGACTCATGAAAA GTGCCCTGGTTCACCGCG CCATC CCCGAAGAAGCAGAGCAC TGCCTCGGGCAGCTT AFE_1814 1578474 - 1578124 - | alkylhydroperoxidase AhpD domain protein TERM 1281 1578248 - 1578224 - G 78 -2 -5.03715 | AGCACTGCCAAAAAA CCCGCACTCA TGATT TCATCGCGGG TGGCCCCGGCGGTTA gpmI-1 1580033 - 1578510 - | 2,3-bisphosphoglycerate-independent phosphoglycerate mutase ppsA 1582441 - 1580030 - | phosphoenolpyruvate synthase AFE_1817 1583498 - 1582536 - | sulfotransferase domain protein TERM 1282 1583062 - 1583045 - G 76 -9.1 -4.04206 | opp_overlap 1583044 CCAGCTCCACATAAA GCTGGGA GATC CCCCAGC CCTTGTCGGGGCGGG TERM 1283 1583424 - 1583405 - G 90 -4.9 -5.40072 | TCGCCGGCAAAAAAA CCTGGGG ATGTTG CCGCAGG TAGGCGTAAAGCGAA AFE_1818 1584334 - 1583510 - | rare lipoprotein A, putative dapE 1585472 - 1584324 - | succinyl-diaminopimelate desuccinylase dapD 1586308 - 1585484 - | 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase TERM 1284 1586012 - 1586001 - G 71 -7.2 -4.15565 | opp_overlap 1585995 GGCACCACCCGAAAA CCGC CGGT GCGG AAATCGTTGCTGTTA AFE_1821 1587542 - 1586322 - | aminotransferase, classes I and II AFE_1822 1587526 - 1587909 + | hypothetical protein AFE_1824 1587884 - 1588633 + | hypothetical protein gph-1 1589269 - 1588595 - | phosphoglycolate phosphatase TERM 1285 1589122 - 1589097 - G 71 -6.7 -4.14739 | overlap 1589101 1589110 1589111 GGATGCACCTGAAAA GCCACCCGCAA AAGG CCGCGGGCGCC CTGGGAAGCGACCGG ubiG 1589969 - 1589262 - | 3-demethylubiquinone-9 3-methyltransferase TERM 1286 1589543 - 1589532 - G 77 -3.6 -5.0133 | overlap 1589533 1589534 1589536 GAGGGTGGCAAAAAA GGCA TCTC CGCC GGGATGGAGCAGGCG AFE_1826 1591291 - 1589966 - | amidohydrolase family protein AFE_1827 1592597 - 1591371 - | membrane-bound lytic murein transglycosylase B, putative TERM 1287 1591922 - 1591908 - G 93 -7 -5.28176 | TTGATGCAGAAAAAA CCGGCG CCG CCCCGG TAATGCCAATGCCAG AFE_1828 1593160 - 1592594 - | lipoprotein, NLP/P60 family AFE_1830 1594574 - 1593921 - | toluene tolerance protein, putative AFE_1831 1595148 - 1594606 - | hypothetical protein TERM 1288 1594937 - 1594927 - G 77 -8.2 -4.42788 | opp_overlap 1594927 1594926, overlap 1594928 GCCAATGCCATAAAA CCGG AAT CCGG ATTGGTACTCCGCAT AFE_1832 1595958 - 1595176 - | hypothetical protein AFE_1833 1596930 - 1595980 - | RNA polymerase sigm-70 factor family AFE_1834 1597308 - 1596952 - | hypothetical protein AFE_1835 1597433 - 1597669 + | hypothetical protein AFE_1836 1598387 - 1597950 - | hypothetical protein AFE_1837 1598310 - 1598579 + | hypothetical protein TERM 1289 1598872 - 1598860 - g 71 -7.7 -4.08767 | opp_overlap 1598859 TGGAGCGTGCCAAAA GCTTC TAC GAAGC AGTTCTCGCAATCAA AFE_1839 1598793 - 1599209 + | hypothetical protein AFE_1838 1599374 - 1599183 - | hypothetical protein AFE_1841 1600734 - 1600940 + | hypothetical protein tkt-1 1601311 - 1603341 + | transketolase TERM 1290 1603812 - 1603781 - g 95 -7.3 -5.48825 | CATCATCCAAAAAAA GCCTGCC-CTGCCCG ATGC CGAGCAATGGC-GGC ATGTGCGGGATAAAC AFE_1844 1603524 - 1604144 + | ferredoxin TERM 1291 1604189 - 1604162 - g 74 -4 -4.7254 | opp_overlap 1604183 AGGTCTCATGAAAAA GCCGCCGGCA CCACGCTT TGCCGTGGGC GATCACGTTACCTGG AFE_1845 1604154 - 1604393 + | hypothetical protein TERM 1292 1604867 - 1604877 + G 73 -4.6 -4.60889 | TGGATGAGGGCATCA CCGG TAC CTGG TTTTTGGCAGTGGTT TERM 1293 1605355 - 1605375 + G 81 -5.3 -4.76041 | overlap 1605357 TGCACGCTCCATATG GCGCAGAGC ATG GATCTGCCC TTTTTACTCCCTCTC AFE_1847 1604425 - 1605513 + | C4-dicarboxylate transporter/malic acid transport protein, putative AFE_1846 1605729 - 1605469 - | hypothetical protein AFE_1849 1605685 - 1605798 + | hypothetical protein AFE_1848 1606748 - 1605780 - | base excision repair protein, HhH-GPD family TERM 1294 1606098 - 1606072 - G 70 -10 -3.53811 | opp_overlap 1606091 CCGATGCCGCGCAAA CGCAGCAGACGC TGC ACGGCTGCGGCG TTGGGCAAATGCTGC AFE_1850 1606982 - 1606749 - | hypothetical protein TERM 1295 1607163 - 1607133 - R 73 -8.9 -3.78934 | overlap 1607134 TCCTCTCCATAATAA CGCTCTCCGTCGG TGATT CCGACGGGTAGCA TAATGGTGAGGCAAC AFE_1851 1607940 - 1607296 - | glycosyl transferase, group 2 family protein TERM 1296 1608045 - 1608057 + r 83 -6.3 -4.84359 | opp_overlap 1608044 CCGCCCGTCATCAAT GTAAG TGG CTTAC TTTTTATCAACGTCC AFE_1852 1608334 - 1608116 - | hypothetical protein AFE_1853 1608541 - 1608344 - | hypothetical protein AFE_1854 1609906 - 1608650 - | pyridine nucleotide-disulfide oxidoreductase AFE_1855 1610996 - 1609899 - | hypothetical protein TERM 1297 1611064 - 1611021 - R 75 -5.8 -4.56597 | gap 1, opp_overlap 1611024 1611037, overlap 1611023 CGCCCCCTGCAAAAA GCCCGCGGTGTAGACGGCGGC GGC GCCGCGTTTCACGCC-CAGGC CCCTGTTTTGAAGCG AFE_1856 1612561 - 1611053 - | dehydrogenase, homolog AFE_1857 1613360 - 1612575 - | glucose 1-dehydrogenase, putative AFE_1858 1613899 - 1613357 - | hypothetical protein TERM 1298 1613739 - 1613721 - G 71 -8.8 -3.84246 | TCGGCAATGATCAAA CCCATGTC CCG GACCTGGG GGACGTCGATGCGCG AFE_1859 1614134 - 1613946 - | hypothetical protein AFE_1860 1615123 - 1614644 - | hypothetical protein phhB 1614393 - 1614722 + | pterin-4-alpha-carbinolamine dehydratase AFE_1862 1615277 - 1615501 + | heavy metal-binding protein, putative AFE_1863 1615611 - 1615721 + | hypothetical protein AFE_1864 1615762 - 1615953 + | hypothetical protein TERM 1299 1615994 - 1615979 - f 91 -11.8 -4.1043 | opp_overlap 1615979 CCTAAATAGGACAAA GGGGCC TTCG GGCCCC TTTTTTATTTGGGGG TERM 1300 1615979 - 1615994 + F 100 -11.8 -5.63517 | opp_overlap 1615979 CCTAAATAGGACAAA GGGGCC TTCG GGCCCC TTTTTTATTTGGGGG AFE_1865 1616064 - 1616357 + | hypothetical protein AFE_1867 1617434 - 1616979 - | hypothetical protein lexA 1617594 - 1618211 + | LexA repressor AFE_1869 1618208 - 1618852 + | cell division inhibitor, putative AFE_1870 1618949 - 1620271 + | hypothetical protein TERM 1301 1620291 - 1620304 + G 89 -6.7 -5.02074 | GCCGAGCTCCACTGT CTCAG CGCA CTGAG TTTTTTACGGGGTGC TERM 1302 1620825 - 1620838 + G 85 -5.9 -5.02476 | overlap 1620825 1620822 GATGTCCACATGGAC CGGCG CAGC CGTCG TTTTTTGCAGGATGT AFE_1871 1620264 - 1623311 + | DNA polymerase III, alpha subunit, putative TERM 1303 1623491 - 1623501 + F 100 -8.2 -5.18726 | AAAATCCATCGCGTT GGCC GTA GGCC TTTTTATTATCGGAG AFE_1872 1623552 - 1624319 + | thiol:disulfide interchange protein, putative TERM 1304 1626145 - 1626157 + G 74 -6.9 -4.3739 | GCTGGCGGACCGTCA GGTGG ACC CCGCC TTTTGTGCCGAACTG pepN 1624316 - 1626943 + | aminopeptidase N AFE_1874 1628454 - 1626985 - | adenylate cyclase AFE_1875 1629076 - 1628438 - | ParA-like protein TERM 1305 1628487 - 1628475 - G 71 -9.1 -3.78775 | overlap 1628482 CCTTCCATCACGAAA CGCAG AAT CTGCG CCCATTGCGGCAGAT ppk 1631194 - 1629089 - | polyphosphate kinase TERM 1306 1631155 - 1631167 + g 70 -4.7 -4.56597 | GGCTGTCGAGAGGCG GCGCG GAA CGGGC TTTTTCCGGCGCAGG folD 1632053 - 1631187 - | methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase TERM 1307 1631922 - 1631909 - G 71 -8.1 -4.03234 | overlap 1631883 TTTTCTGTACATAAA TCCGG GAGG CCGGA TCAGCGCCGACCAGT AFE_1878 1635368 - 1632288 - | transporter, AcrB/AcrD/AcrF family TERM 1308 1635221 - 1635241 + g 78 -14.1 -3.17051 | overlap 1635219 TGGCGCCGGGGTAGG CCGTGGTTA CCG TAACCACGG TGTTGGTGATGGCCG AFE_1879 1636471 - 1635380 - | efflux transporter, RND family, MFP subunit TERM 1309 1635994 - 1636004 + g 77 -3.2 -5.00616 | CGAGTTTTGCGAGAG TGGC GTG GTCA TTTTTTACGGCGGCG TERM 1310 1636144 - 1636160 + g 74 -10.9 -3.42459 | GAGCCTCGTCGCTGG CCAGTTG CGC CAACTGG TTGCTGTTGTCGATC AFE_1880 1638062 - 1636515 - | RND efflux system, outer membrane lipoprotein, NodT family TERM 1311 1638433 - 1638461 + G 70 -13.1 -2.87132 | TGCGGGAGGTGTTGG CTGCGCATCCGCA ATC TGCGGAAGCACAG TATGTGGAAGCGCGA TERM 1312 1638899 - 1638927 + G 80 -10.1 -4.09685 | GGTGGGGGCAGGACT GGCGGCCGGGCAG GCG CTGGCCGGAAGCC TTTTCGGACATGGCA AFE_1881 1638285 - 1639073 + | hypothetical protein TERM 1313 1639098 - 1639117 + T 100 -11.4 -5.33921 | TTTTGCAAACTCGGA GGGGCGTC GCTG GATGCCCC TTTTTTAATTCGTTT maf-2 1639718 - 1639140 - | maf protein ppc 1642520 - 1639731 - | phosphoenolpyruvate carboxylase TERM 1314 1641834 - 1641806 - G 76 -5.9 -4.59773 | gap 1, overlap 1641807 1641808 CGGCATTTGCAAAAA CCCGG-CGCGCG GCCCGG CGCGCGGCCCGA TAAGTGAGAGGTACC hfq 1642855 - 1643121 + | RNA chaperone Hfq TERM 1315 1643210 - 1643222 + G 73 -4.7 -4.70659 | overlap 1643206 AGAGGCGGATCCCGA CGCCG GGG CGGAG TTTTTCCATCTGGCC TERM 1316 1643701 - 1643738 + G 85 -15.5 -3.23711 | gap 1, opp_overlap 1643699 1643697, overlap 1643691 ATCGGGCAACACAGC GGCGGGCG-CGGCAGCGG GCA CCCCTGCCGACGGTCGCC TTGGTCGGTTATACC TERM 1317 1644167 - 1644188 + G 74 -13.1 -3.14344 | GCGTGTCAGCGCGCA CTCGGGTAT CGGC ATACCCGAG TTGCTGCAGGCCGTG hflX 1643145 - 1644443 + | GTP-binding protein HflX hflK 1644458 - 1645651 + | hflK protein TERM 1318 1645698 - 1645713 + G 73 -4.6 -4.70169 | ATTGGCGCTGGTGCT GCTGGC GTCG GCAAGC TTTTATTCCGTATCC TERM 1319 1646341 - 1646357 + G 73 -10.1 -3.57406 | overlap 1646339 CTGAAGGGGCAGGGA GATGCCG AGG CGGCGTC TATTTATGGTGCCGC hflC 1645648 - 1646520 + | hflC protein TERM 1320 1646579 - 1646615 + G 74 -12.2 -3.23638 | gap 1, opp_overlap 1646587, overlap 1646610 TGAGGATGTTCTCCC CGCACGAACGGAGGCGC TGGA GCGCTGCCGC-CGTGCG TTGCTCGATCTTTAC hisZ 1646517 - 1647719 + | ATP phosphoribosyltransferase regulatory subunit purA 1647762 - 1649057 + | adenylosuccinate synthetase TERM 1321 1649078 - 1649099 + F 100 -10.1 -4.91852 | opp_overlap 1649078 CCGGGCAATAAAAAA GGGCAGACC GTTT GGTCTACCC TTTGTTTTTGGTACC TERM 1322 1649099 - 1649078 - f 100 -12.3 -5.4505 | opp_overlap 1649078 CCGGGCAATAAAAAA GGGCAGACC GTTT GGTCTACCC TTTGTTTTTGGTACC vacB 1649232 - 1651472 + | ribonuclease R AFE_1892 1652275 - 1651490 - | hypothetical protein TERM 1323 1651786 - 1651799 + g 93 -5.9 -5.58074 | overlap 1651784 GCGGATCGTCTTTGC GTGCC TCCA GGCGC TTTTTTTGCTCATTC TERM 1324 1652142 - 1652157 + g 90 -4.6 -5.37865 | GCGGTGTCGCGGCCT TCCAGG ATAA CCAGGA TTTTTTCATTCTTGC TERM 1325 1652331 - 1652318 - R 95 -8.1 -5.1101 | GTAGTATCTAAAAAA GGCTG CGCG CAGCC TTGCCGATGCCTTCC AFE_1893 1653698 - 1652310 - | pyridine nucleotide-disulfide oxidoreductase AFE_1894 1654552 - 1653800 - | hypothetical protein TERM 1326 1654376 - 1654362 - G 100 -2.8 -5.95166 | CCGAAGGAAAAAAAA GGCA GGGATTG TGCC ATGGCCCAGCGCAAC AFE_1895 1655856 - 1654828 - | ISAfe1, transposase TERM 1327 1655227 - 1655238 + g 71 -7.2 -4.15222 | CATCAATCGAGTCAC GGCC TCTT GGCC TTTCTTCCACAGCGT TERM 1328 1655250 - 1655260 + g 71 -6.8 -4.2349 | GGCCTTTCTTCCACA GCGT CAA ACGC TTTTCGATATCCGCA purN 1656638 - 1655979 - | phosphoribosylglycinamide formyltransferase purM 1657668 - 1656631 - | phosphoribosylformylglycinamidine cyclo-ligase TERM 1329 1657771 - 1657786 + G 80 -10.4 -4.08064 | opp_overlap 1657771 CGACCCAATAAAAAA GAGCGG CGAA CCGCTC TTTTCGGACCGGGTT TERM 1330 1657786 - 1657771 - g 100 -10.4 -5.4833 | opp_overlap 1657771 CGACCCAATAAAAAA GAGCGG CGAA CCGCTC TTTTCGGACCGGGTT AFE_1899 1657670 - 1657834 + | hypothetical protein sod 1658430 - 1657813 - | superoxide dismutase TERM 1331 1658672 - 1658683 + G 85 -2.2 -5.40072 | GGGGATTTTTTGCCG TGGC ATTG GTCA TTTTTTTCGCAGCGG TERM 1332 1659009 - 1659031 + G 84 -5.4 -4.93898 | AGAGGCGTCCAGCCG CTGGCAGATG CCG CTGCTGCCGG TTTTTATCCTGGTAT AFE_1900 1658587 - 1659135 + | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase, putative AFE_1901 1659135 - 1659845 + | hypothetical protein TERM 1333 1660010 - 1660022 + G 73 -4.8 -4.63527 | CGCGCGGGGTTGCTG GCGT ATACC ACGC TTTTTGGCCTGATAC yihY 1659938 - 1660726 + | YihY family protein TERM 1334 1661035 - 1661061 + G 73 -10.8 -3.69323 | opp_overlap 1661024 AAATCCGCTGCGAAC GCTGCATGGGTG CTA TGCCCTTGCAGC TTTCCGTAATGGTAC AFE_1903 1660821 - 1661282 + | hypothetical protein rpmF 1661322 - 1661507 + | ribosomal protein L32 plsX 1661545 - 1662570 + | fatty acid/phospholipid synthesis protein PlsX fabH 1662567 - 1663511 + | 3-oxoacyl-(acyl-carrier-protein) synthase III TERM 1335 1663741 - 1663718 - g 70 -3.1 -4.65895 | gap 1 GGGCCCACCGAAAAA CTGAG-CCAG ACCCG CTGGACGCAG CCGGTGATGCTGACT fabD 1663550 - 1664485 + | malonyl CoA-acyl carrier protein transacylase fabG 1664485 - 1665234 + | 3-oxoacyl-(acyl-carrier-protein) reductase acpP 1665319 - 1665567 + | acyl carrier protein fabF 1665604 - 1666845 + | 3-oxoacyl-(acyl-carrier-protein) synthase II TERM 1336 1666970 - 1666985 + G 80 -10.4 -4.07687 | AACCATTGCAGTGAT CAGGGG TGTC CCCCTG TTTTGGGAGGAGCAT TERM 1337 1667490 - 1667459 - g 80 -10.1 -4.11216 | gap 1, opp_overlap 1667458 1667459 1667460, overlap 1667460 TCCGGAGCTGGAAAA CGGCGGCATCGCTG GTGTT CAGCGG-GCCGCCA TTCTGGCATGGTTGC TERM 1338 1667460 - 1667489 + G 76 -14.3 -2.60688 | gap 1, opp_overlap 1667459 1667460, overlap 1667458 1667459 CCGGAGCTGGAAAAC GGCGGCATCGCTGG TGT TCAGCGG-GCCGCC ATTCTGGCATGGTTG AFE_1911 1666875 - 1667708 + | 4-amino-4-deoxychorismate lyase, putative TERM 1339 1669325 - 1669347 + G 70 -3.4 -4.71426 | gap 1, overlap 1669330 ACGCTGTGCGGGCAA GGCTCGCCG CCGGCC TGGC-AGCC TTTTATTCATGAACA tmk 1668715 - 1669359 + | thymidylate kinase TERM 1340 1669633 - 1669611 - g 71 -6.9 -4.24002 | CCCGAAACCGGAAAA CGCATCACC ATTGA GGCGGTGCG CCATGCCAACGAGTT holB 1669356 - 1670357 + | DNA polymerase III, delta prime subunit AFE_1915 1670341 - 1670697 + | type IV pilus assembly protein PilZ, putative TERM 1341 1671156 - 1671168 + G 70 -3.4 -4.66537 | CCCTGGATTCCGGCC GCAT CCATC ATGC TTTTCTGTTCACCGG dnaX 1671047 - 1672765 + | DNA polymerase III, subunits gamma and tau AFE_1920 1672785 - 1673108 + | conserved hypothetical protein TIGR00103 TERM 1342 1673412 - 1673423 + G 81 -4.4 -4.89233 | overlap 1673420 GAGGATACGGGGGTG TTCG TCGG CGAA TTTTTCGTATTGATG recR 1673115 - 1673714 + | recombination protein RecR TERM 1343 1674216 - 1674230 + G 72 -2.1 -4.73388 | gap 1, opp_overlap 1674215, overlap 1674216 1674217 1674219 ATTATGGTATTCAAG C-CTGG TTTA CCAGCG TTTTTGGTGCACCTT TERM 1344 1674637 - 1674650 + G 70 -3.8 -4.58943 | GGCTTTGGCCATCGG TGCC ATTGCC GGCA TTATTTTTGTCTACC amtB 1673774 - 1674991 + | ammonium transporter family protein TERM 1345 1675481 - 1675513 + G 76 -10.6 -3.73783 | gap 1, opp_overlap 1675478 TGCTGGGGATAACGG TCGCCGCTGTACAGG CAGA CC-GTATCGCGGCGA TTGTTCGGTTACGTG AFE_1923 1674994 - 1675845 + | YjeF-related protein TERM 1346 1676613 - 1676633 + G 83 -2.6 -5.22312 | gap 2 ATGAGGTCGCGACCG GCTTCGGCCG CAG CGG-C-AAGC TTTTTTCCTGTGAGT TERM 1347 1677128 - 1677098 - g 79 -16.2 -2.78596 | GATCTCCTCACCATA GTTCCGCCGCTGTC GGT GACAGCAGCGGAAA TAGACACTATCCTCA bioA 1675832 - 1677181 + | adenosylmethionine-8-amino-7-oxononanoate aminotransferase AFE_1925 1677181 - 1677636 + | CBS domain protein AFE_1926 1677649 - 1678134 + | conserved hypothetical protein TIGR00150 mutL 1678124 - 1679911 + | mismatch repair protein MutL miaA 1679836 - 1680855 + | tRNA delta(2)-isopentenylpyrophosphate transferase TERM 1348 1681138 - 1681161 + G 74 -6.6 -4.4009 | GCCAAGATGTTGCAC CTCAGTCGCG ATGA CGCGGGTGGG TTTTATGCGGTACAC ndk 1681015 - 1681440 + | nucleoside diphosphate kinase AFE_1930 1681444 - 1682532 + | radical SAM enzyme, Cfr family pilF 1682625 - 1683374 + | type IV pilus biogenesis/stability protein PilW AFE_1932 1683392 - 1684366 + | hypothetical protein ispG 1684356 - 1685456 + | 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase hisS 1685492 - 1686811 + | histidyl-tRNA synthetase AFE_1935 1686808 - 1687419 + | hypothetical protein AFE_1936 1687416 - 1688603 + | PQQ enzyme repeat domain protein TERM 1349 1689744 - 1689728 - g 74 -12.3 -3.2056 | ATCGAGACCCATCAA CCACCCA TGG TGGGTGG GCGACGCATCAAACT engA 1688615 - 1689964 + | ribosome-associated GTPase EngA AFE_1938 1689965 - 1690360 + | hypothetical protein pstS-1 1690555 - 1691631 + | phosphate ABC transporter, periplasmic phosphate-binding protein PstS pstC_2 1691756 - 1692712 + | phosphate ABC transporter, permease protein PstC pstC_1 1692712 - 1693623 + | phosphate ABC transporter, permease protein, putative AFE_1942 1694408 - 1693644 - | hypothetical protein AFE_1943 1694816 - 1695493 + | dsbG domain protein TERM 1350 1695523 - 1695506 - g 78 -2.5 -5.08601 | overlap 1695507 TGACCTGAACAAAAA TGCTGCC ATCA GGCTGCC GTCTCCAGATCAAAC AFE_1944 1695505 - 1695621 + | hypothetical protein AFE_1945 1695634 - 1696392 + | hypothetical protein AFE_1947 1699781 - 1696671 - | heavy metal efflux pump, CzcA family TERM 1351 1698505 - 1698462 - G 81 -4.5 -4.88736 | gap 2, overlap 1698464 GATCAGCGAGAAAAA CAGCGCCGGACCAACCTCTGC CGCC GCAGCGGTTG--CCGCCGCCC AGGGATCGACGCCAG TERM 1352 1698503 - 1698464 - G 76 -9.3 -4.06182 | gap 2, overlap 1698462 TCAGCGAGAAAAACA GCGCCGGACCAACCTCTGC CGCC GCAGCGGTTG--CCGCCGC CCAGGGATCGACGCC AFE_1948 1701093 - 1699774 - | heavy metal efflux transporter, MFP subunit, putative TERM 1353 1700154 - 1700174 + g 80 -10.3 -4.13767 | GATTGGAAAAGCTCA GCCGGGCCG TCA CCGTCCGGC TTTTAGGATCGAGGG AFE_1949 1702373 - 1701090 - | outer membrane heavy metal efflux protein, putative TERM 1354 1702066 - 1702054 - G 77 -7.7 -4.35581 | CCAAAAGAGGGAAAA GTCTG ACT CAGAC CCACGCTCAGCATGC AFE_1950 1702374 - 1702610 + | hypothetical protein AFE_1951 1703636 - 1703061 - | conserved hypothetical protein TIGR00481 TERM 1355 1703581 - 1703559 - G 71 -6.8 -4.23104 | overlap 1703560 GGAAAGTGCAAGAAA CGGCCCCGCC ACT GCCGAGCCCG CAGGAAGGCTGCCAA TERM 1356 1703975 - 1703962 - H 76 -3.1 -5.07107 | gap 1, overlap 1703964 TAAATCGGCAAAAAA CGTCCA CGA TGG-CG GGAAATACGCACAGA TERM 1357 1704304 - 1704275 - H 100 -17.9 -3.61089 | overlap 1704269 1704296 GCCCAATAACCAGAA CATCCGCGGTGGC CAAG GCAACCGCGGATG CGGCGTCGGCGGAGG AFE_1952 1704354 - 1705025 + | hypothetical protein AFE_1953 1705240 - 1705455 + | ferredoxin, putative AFE_1955 1706030 - 1705635 - | transcriptional regulator, Fur family AFE_1956 1707218 - 1706127 - | oxidoreductase, FAD-binding AFE_1957 1710789 - 1707235 - | hypothetical protein TERM 1358 1707965 - 1707977 + g 70 -4.8 -4.53607 | overlap 1707961 ACATTGACACCCAGG GCAG GGCCG CTGC TTTTGTGCTCATTTT TERM 1359 1708058 - 1708085 + g 75 -2 -4.96468 | overlap 1708045 AATATACGCAGACGG TCGGTGTGTA TATTGCCC TGCACGTCGA TTTTCTTTAGGTTTC TERM 1360 1708482 - 1708470 - G 70 -4.8 -4.57569 | opp_overlap 1708472, overlap 1708472 GGAGGGCGGCAAAAA GTGG TGCAC CCAC ATGCGCCTTTATAGC TERM 1361 1709203 - 1709225 + g 79 -9 -4.28375 | AGCCTGCAAGGCGTT CGCGGCCCGG AAT TCGGCCCGTG TTTTCAGTGTATTGA AFE_1958 1712516 - 1710786 - | outer membrane protein, OMP85 family TERM 1362 1712190 - 1712204 + g 71 -6.4 -4.22948 | AGCCGGCAGTTTGGA TCCATC ACC GGTGGA TTTTAGGTCGATTTT AFE_1959 1713086 - 1712823 - | hypothetical protein dacB 1714694 - 1713192 - | D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase TERM 1363 1713918 - 1713902 - G 79 -7.9 -4.57569 | overlap 1713904 GCATCGCGGCAAAAA TACCGCC CTT GGCGGAA ATCGCGCCAGTCAAT TERM 1364 1713916 - 1713904 - G 78 -10.5 -3.90316 | overlap 1713902 ATCGCGGCAAAAATA CCGCC CTT GGCGG AAATCGCGCCAGTCA TERM 1365 1714632 - 1714620 - G 77 -3.3 -4.93318 | CATAAGCCAGAAAAA CGGCA ATA TCCCG ACAAAAAAATACCGC AFE_1961 1715966 - 1714728 - | AmpG permease protein, putative TERM 1366 1714918 - 1714904 - G 72 -11.4 -3.30635 | overlap 1714893 TAAATCCGCCGACAA CCGTGG CTG CCACGG ACATCAGGGCGGAGC TERM 1367 1715007 - 1714997 - G 77 -8.2 -4.35461 | overlap 1714988 1714998 GGAAGACCATCAAAA CGGC GGT GCCG AGACCCGCCGCAGCC TERM 1368 1716004 - 1715988 - R 100 -15.1 -5.4251 | TCCAGATATAAAAAA CCCCCGC AGA GCGGGGG TTAGACGACCAAAGA AFE_1962 1716301 - 1716026 - | cytochrome c family protein AFE_1963 1716593 - 1716865 + | hypothetical protein AFE_1964 1717124 - 1718248 + | fatty acid desaturase AFE_1965 1718711 - 1718307 - | hypothetical protein AFE_1966 1719747 - 1718746 - | NAD-dependent epimerase/dehydratase family protein rfaD 1720736 - 1719747 - | ADP-L-glycero-D-mannoheptose-6-epimerase TERM 1369 1720723 - 1720711 - G 74 -6.9 -4.36914 | TTGGCGCCGATAAAA CCGGC CCC GCCAG TGACGATATACATGC TERM 1370 1721070 - 1721084 + G 84 -5.6 -5.00846 | overlap 1721058 GCACCCGACAGCTTG CCGCCT TCG GGGTGG TTTTTCTGATGTTTA TERM 1371 1721615 - 1721625 + G 74 -6.8 -4.37092 | GCCGGATTATCGCTG GCAC TGG GTGC TTTTGTAGCAGGAAT TERM 1372 1721683 - 1721702 + G 75 -7.9 -4.27192 | TCAGGTGGAAGCGGA TATCGCG CCTTTT CGCGATA TTTTACTGGGCCTTT TERM 1373 1722259 - 1722293 + G 83 -2.7 -5.24129 | gap 1, overlap 1722256 1722260 CATTTTTTATGGCGA CGCCAGTCGTC-GCGA CGTG TTGCAGGCGGCAGGCA TTTTTTCTGCACGGG TERM 1374 1722487 - 1722499 + G 71 -9.1 -3.75292 | AGGTGCTCTGATGCT GGCCT CGC AGGCC TTGTTGCTGATCGGT AFE_1968 1720895 - 1722880 + | potassium-efflux system protein acs 1722976 - 1724943 + | acetyl-CoA synthetase TERM 1375 1725007 - 1725038 + T 100 -15.9 -4.00348 | opp_overlap 1725008, overlap 1725008 1725010 GCGCCGGCAGAGCAA AGAGGTTCCCGGC GCAAAA GCCGGGAACCTCC TTTGATTCCTTACGG TERM 1376 1725008 - 1725037 + T 100 -19.4 -2.99727 | opp_overlap 1725008, overlap 1725007 1725010 CGCCGGCAGAGCAAA GAGGTTCCCGGC GCAAAA GCCGGGAACCTC CTTTGATTCCTTACG TERM 1377 1725037 - 1725008 - T 100 -19.4 -3.83026 | opp_overlap 1725008 1725007 1725010 CGCCGGCAGAGCAAA GAGGTTCCCGGC GCAAAA GCCGGGAACCTC CTTTGATTCCTTACG TERM 1378 1725010 - 1725035 + T 100 -16.2 -3.04696 | opp_overlap 1725008, overlap 1725008 1725007 CCGGCAGAGCAAAGA GGTTCCCGGC GCAAAA GCCGGGAACC TCCTTTGATTCCTTA clpB 1727714 - 1725114 - | clpB protein TERM 1379 1726008 - 1726025 + g 100 -7 -5.61881 | overlap 1726000 CCGCGCCTGCAGGCG CTCCTC CATCTT GAGGAG TTTTTCTTTTTCACC AFE_1971 1728917 - 1727754 - | transporter, putative TERM 1380 1727843 - 1727822 - G 74 -5.7 -4.57837 | overlap 1727823 ATACCCCCCCAAAAA GCGCCAGCG CCGA CGCTGCGGC AAAGGTATTCTGCCC TERM 1381 1728267 - 1728255 - G 77 -3.3 -4.88495 | ATAGATAGAATAAAA CGCGT AAT AGGCG CCATGACTGGCCTGC TERM 1382 1728324 - 1728309 - G 72 -2.5 -4.77036 | CGCCAGCAGGAAAAA CCAGA GACTCA CCTGG CGGAGTGTGCCGCTG aroC 1730012 - 1728921 - | chorismate synthase TERM 1383 1729555 - 1729513 - G 84 -10.7 -4.25104 | opp_overlap 1729513 TCCGCCGCATCAAAA TCCTCGGCGTGGATGG-GC CCCATCT GCGCCATCCACGCCT-GGA TGTTCACGCCAAGAC AFE_1973 1730810 - 1730016 - | conserved hypothetical protein TIGR00294 dxs 1732726 - 1730852 - | 1-deoxy-D-xylulose-5-phosphate synthase ispA 1733643 - 1732723 - | geranyltranstransferase xseB 1733909 - 1733640 - | exodeoxyribonuclease VII, small subunit TERM 1384 1733798 - 1733768 - G 74 -6 -4.56597 | TGCCGCGCTGAAAAA GGGCGACAGAGTCT TCC AGACCCAACTGCCC CCCTTCCAGGCGGCG TERM 1385 1735043 - 1735066 + G 70 -3.8 -4.60041 | overlap 1735032 1735025 1735051 1735059 GAATTGGTACCCGGC AAGATCGGGA CCGT TTCCGGTCTG TTTTTCGGGCTGGCT AFE_1977 1734020 - 1735231 + | fosmidomycin resistance protein, putative TERM 1386 1735411 - 1735399 - g 71 -6.9 -4.25104 | opp_overlap 1735408 GGTTCCCGAGGAAAA GCCCC ACT GGAGC GAGAGCCTGCCGCCC AFE_1978 1735352 - 1736179 + | TonB family protein AFE_1979 1736602 - 1736231 - | thioredoxin TERM 1387 1736869 - 1736898 + G 73 -4.9 -4.65895 | gap 1, overlap 1736871 1736872 GGGTGAACTGTCCAA TTTCAGCAGCCCCG GAT CGGGGCA-CTGGTA TTTTTCGCTAAAGGA xseA 1736753 - 1738093 + | exodeoxyribonuclease VII, large subunit AFE_1981 1739730 - 1738201 - | PQQ enzyme repeat protein AFE_1982 1740177 - 1739731 - | hypothetical protein AFE_1983 1740347 - 1740529 + | hypothetical protein AFE_1984 1740641 - 1740811 + | hypothetical protein AFE_1985 1740920 - 1741096 + | hypothetical protein TERM 1388 1741525 - 1741540 + G 78 -4.6 -4.76041 | GACCAATGATCCCCA CTCCGC CACC GCGCAG TTTTTCATCAATCTG ppiB 1741238 - 1741750 + | peptidyl-prolyl cis-trans isomerase B lpxH 1741755 - 1742528 + | UDP-2,3-diacylglucosamine hydrolase TERM 1389 1744892 - 1744923 + G 81 -5.1 -5.0133 | gap 1, overlap 1744889 CGATGTTGGCTGCTT TGGTTGCCCAGGGG CTTTT CTCCTGG-CTGCCA TTTTTTCAGCGGGTA TERM 1390 1745016 - 1745036 + G 77 -14.7 -2.70932 | overlap 1745013 1745016 GTGGCTGGCTGGCAA GCTTGCGGC GCC GCCGCAGGC TGCTTGAGGCGCACC AFE_1988 1742560 - 1745043 + | cation-transporting P-type ATPase, putative TERM 1391 1745154 - 1745172 + T 80 -4.5 -5.0538 | CACTTGCCGTCCTGC CGATGCG CTCCA TGCGTCG TTTTTTGCAATGGAC leuA-2 1746836 - 1745133 - | 2-isopropylmalate synthase TERM 1392 1745405 - 1745391 - G 74 -12.8 -3.18582 | CAGCGCATCGACCAA GGCGCC TAC GGCGCC ACTCCCCTTGCCCTG AFE_1990 1746978 - 1747463 + | transcriptional regulator, AsnC family AFE_1991 1748882 - 1747596 - | hypothetical protein AFE_1992 1750163 - 1748961 - | C4-dicarboxylate transporter/malic acid transport protein TERM 1393 1749319 - 1749303 - G 78 -2.2 -5.0538 | CCGCAGGGTAAAAAA GACTGC CATGC ACAGCC ACCAGGTGCCGAAAC TERM 1394 1750004 - 1749989 - G 85 -3.2 -5.3104 | overlap 1749991 GCACGAAAAAGAAAA CGTTGG CGCA CCAAAG GGCCTGTGCCGCCGG AFE_1993 1750286 - 1751191 + | transcriptional regulator, LysR family TERM 1395 1751364 - 1751354 - T 75 -6.8 -4.40572 | overlap 1751344 ACAAGGCCGACAAAA TGCC ATC GGCA GCATAGTCGTCCCCC ribB 1752060 - 1751389 - | 3,4-dihydroxy-2-butanone 4-phosphate synthase AFE_1996 1752502 - 1752350 - | hypothetical protein AFE_1997 1753333 - 1752620 - | autoinducer-binding transcriptional regulator, LuxR family AFE_1998 1753495 - 1753926 + | hypothetical protein TERM 1396 1753957 - 1753920 - f 81 -12.9 -3.01416 | opp_overlap 1753903 1753930, overlap 1753930 TATCATGGATAGATA TGTTTGACAAGCTGTCA ACCT TGACAGCTTGTCAGAAA CGGCGGGGCTGGTAG TERM 1397 1754493 - 1754534 + G 73 -10.2 -3.68827 | gap 2, opp_overlap 1754489 1754486, overlap 1754495 1754500 TCTGAATATCACGCA CATCGAGCGGGCCCGCCGAT GATC ATCGGCGGGCAC-C-CGATA TTTGCATGCTGGATA TERM 1398 1754495 - 1754532 + G 79 -12.8 -3.42395 | gap 2, opp_overlap 1754489 1754486, overlap 1754493 1754500 TGAATATCACGCACA TCGAGCGGGCCCGCCGAT GATC ATCGGCGGGCAC-C-CGA TATTTGCATGCTGGA AFE_1999 1754010 - 1754561 + | autoinducer synthesis protein TERM 1399 1754831 - 1754860 + G 73 -9.3 -3.86897 | opp_overlap 1754838 GGATATTGCTTTGCT GAAGTTACGGATG AAGA CATCCGTAACGCC TTTCTAAAAAATCAG TERM 1400 1754882 - 1754872 - g 84 -5.4 -5.00616 | CGCCTTTCTAAAAAA TCAG GAC CTGA GGGATCTGGCGGTTA AFE_2000 1754753 - 1754911 + | hypothetical protein TERM 1401 1755055 - 1755081 + G 76 -5.9 -4.59853 | gap 1, overlap 1755056 GGGCTACAGGCCGAC ATTTGCCGAGCG ATTG CGCT-GGCAAAG TTTTTAGAGGATTGA AFE_2001 1754935 - 1755096 + | hypothetical protein AFE_2002 1755453 - 1755112 - | hypothetical protein AFE_2004 1756809 - 1756381 - | acetyltransferase, GNAT family AFE_2005 1757550 - 1756864 - | isonitrile hydratase, putative AFE_2006 1758206 - 1757547 - | transcriptional regulator, putative AFE_2007 1758906 - 1758220 - | hypothetical protein TERM 1402 1758301 - 1758318 + gr 70 -3.4 -4.66163 | GGGATGGCTCCGATA CTGCGA TATGTT TTGCAG TTTTTCCATGGCGGT AFE_2008 1759378 - 1758878 - | hypothetical protein AFE_2009 1759996 - 1759466 - | hypothetical protein AFE_2010 1760247 - 1760020 - | hypothetical protein AFE_2011 1760743 - 1760132 - | transcriptional regulator, TetR family AFE_2012 1760818 - 1761174 + | hypothetical protein AFE_2013 1761616 - 1761179 - | transcriptional regulator, MarR family AFE_2014 1761720 - 1762199 + | alkylhydroperoxidase AhpD family core domain protein TERM 1403 1762244 - 1762225 - g 84 -11.4 -4.11216 | opp_overlap 1762243 GGGCGATCCGGAAAA CAGCGGGA ATAT CCCCGCTG CGGTCGAACTGCGTT AFE_2015 1762196 - 1762681 + | acetyltransferase, GNAT family TERM 1404 1762793 - 1762759 - T 90 -4.2 -5.31456 | opp_overlap 1762761 1762763, overlap 1762763 TTAACCCAGAAAAAA TGAAGGCACCTAGCAA TGT TCGCTAAGTGCCTGTT TTACATGGTGCGCTC TERM 1405 1762761 - 1762791 + T 70 -6.8 -4.21194 | opp_overlap 1762759 1762763, overlap 1762763 AACCCAGAAAAAATG AAGGCACCTAGCAA TGT TCGCTAAGTGCCTG TTTTACATGGTGCGC TERM 1406 1762789 - 1762763 - T 100 -13.8 -3.99236 | opp_overlap 1762761 1762763, overlap 1762759 CCCAGAAAAAATGAA GGCACCTAGCAA TGT TCGCTAAGTGCC TGTTTTACATGGTGC TERM 1407 1762763 - 1762789 + T 70 -9.4 -3.70674 | opp_overlap 1762763 1762759, overlap 1762761 CCCAGAAAAAATGAA GGCACCTAGCAA TGT TCGCTAAGTGCC TGTTTTACATGGTGC AFE_2017 1763678 - 1762944 - | PspA/IM30 family TERM 1408 1763460 - 1763481 + g 71 -8.6 -4.11216 | overlap 1763428 1763433 TGCCACTCGGGCGTC GGCGTCGG CTTTAT CCGCCGCC TTTTGGGCCTGGGCC TERM 1409 1763535 - 1763545 + g 74 -6.8 -4.371 | opp_overlap 1763533, overlap 1763531 TTCCGTCACCACATC GGCA AGA TGCC TTTTGGTATCCTGCA AFE_2018 1764542 - 1763718 - | hypothetical protein AFE_2019 1765516 - 1764539 - | hypothetical protein TERM 1410 1765460 - 1765492 + g 71 -7 -4.26881 | gap 1, overlap 1765462 ATTTTCTGCGGCGTG CCGGGCATCG-AGAG CAAC CTCTTCGATACCCTG TTTGATTTTGTCCCA AFE_2020 1765550 - 1765960 + | hypothetical protein AFE_2021 1768499 - 1766064 - | copper-translocating P-type ATPase TERM 1411 1766439 - 1766429 - G 85 -6.8 -4.82901 | CCTCGCCGACAAAAA CCAC CTT GTGG CCCTCTGCCTGCAGT TERM 1412 1767877 - 1767858 - G 70 -3.4 -4.58395 | overlap 1767843 1767860 GCCAGGCCGGAAAAA TCGTCGGC CTGG GCCGGCCA GCACGATCGTCGCCA TERM 1413 1768929 - 1768909 - g 71 -9.7 -3.72893 | overlap 1768911 1768913 CAGGGCTTCACCAAA TATACCGCC GTC GGCGGCACA CCGGAACTGAAGGCC TERM 1414 1768927 - 1768911 - g 70 -10.1 -3.44848 | overlap 1768909 1768913 GGGCTTCACCAAATA TACCGCC GTC GGCGGCA CACCGGAACTGAAGG aspC 1768717 - 1769898 + | aspartate aminotransferase TERM 1415 1769956 - 1769938 - T 74 -11.6 -3.21747 | TTAGCCCAGCATTAA CCCCGCTC AGG GGGCGGGG CTAATGCCGACCGCC purT 1771128 - 1769944 - | phosphoribosylglycinamide formyltransferase 2 TERM 1416 1771355 - 1771342 - g 70 -3.8 -4.70659 | CGTCATACCGAAAAA GCCA CGGAGC TGGC CAAAGAAACCGGAAT AFE_2024 1771228 - 1772148 + | 6-phosphogluconate dehydrogenase family protein TERM 1417 1773131 - 1773143 + G 75 -2.6 -4.99035 | TCGACAACTGGCGCT GGCG GGGTG TGCC TTTTTATCTGCGTAC zwf 1772149 - 1773612 + | glucose-6-phosphate 1-dehydrogenase TERM 1418 1773637 - 1773618 - f 71 -8.6 -3.7795 | overlap 1773608 1773622 TCAAATCTGAGGAAA GATACGGC GGAG GCCATATC CTCCGTCGGCTCTGG AFE_2026 1773881 - 1774174 + | transcriptional regulator, ArsR family dusA 1775169 - 1774177 - | tRNA-dihydrouridine synthase A TERM 1419 1775213 - 1775203 - R 71 -4.6 -4.54477 | overlap 1775195 1775205 TCAAAATGCACAAAA GCGC CTA ACGC ACGGGTCTGCCGCGT parC 1777612 - 1775207 - | DNA topoisomerase IV, A subunit TERM 1420 1775357 - 1775372 + g 76 -5.4 -4.62069 | AATCAGTTTGACCCC CTTACC CTTG GGTAGG TTTTTGACATCCACC parE 1779600 - 1777630 - | DNA topoisomerase IV, subunit B TERM 1421 1779178 - 1779200 + g 93 -11.3 -4.35518 | gap 1, overlap 1779178 CCGATAGCGACCGTT CCC-CGACCC CTGG GGGTCGCGGG TTTTGATCTCGACTT AFE_2030 1779649 - 1779747 + | hypothetical protein AFE_2031 1781196 - 1779889 - | sensor histidine kinase TERM 1422 1780612 - 1780598 - G 76 -5.6 -4.63486 | ATGGCCTGAAGAAAA GGGGCA ATC TCCCCC GGCACTTGCTCTAGA AFE_2032 1781855 - 1781193 - | DNA-binding response regulator TERM 1423 1781907 - 1781890 - R 86 -10.5 -4.20883 | overlap 1781903 GAAAAACTTGTAAAA CCCGCCC CAAG GAGCGGG TTCACCCACTAAACA AFE_2033 1782244 - 1781933 - | hypothetical protein AFE_2034 1783516 - 1782440 - | hypothetical protein AFE_2035 1786585 - 1783559 - | transporter, AcrB/AcrD/AcrF family TERM 1424 1785095 - 1785083 - G 70 -3.3 -4.62783 | GATCCAGGCCAAAAA GCGTC CCT GATGC TCCGCTTGCTCGGCA TERM 1425 1785609 - 1785586 - G 85 -6.6 -4.82901 | opp_overlap 1785595, overlap 1785587 CCGCGCCGATAAAAA TGGCATCCCG CACG CTGGATGCCG CGGCGGTAATCAGCT TERM 1426 1785608 - 1785587 - G 70 -10.1 -3.49419 | opp_overlap 1785595, overlap 1785586 CGCGCCGATAAAAAT GGCATCCCG CACG CTGGATGCC GCGGCGGTAATCAGC TERM 1427 1785859 - 1785887 + g 70 -4.6 -4.57341 | CGGCAGCACCGGTCT TGAGCACGATAT GACGG ATATCCTGCACA TTTTTCAGAGGGCTT AFE_2036 1787625 - 1786585 - | efflux transporter, RND family, MFP subunit AFE_2037 1788971 - 1787622 - | outer membrane efflux protein TERM 1428 1787668 - 1787696 + g 74 -13.1 -3.14132 | AAACCGACCGCCATT TCCAGCGCTGCCT GCT GGGCAGCGTAGGA TTCCTGCAGCGCCAG TERM 1429 1788211 - 1788180 - G 91 -13.8 -3.97834 | gap 1 CAATGTTACCAGAAA CGCGGCATCTGGC AGGCTGG GCCAGA-GCCGCG GGGGCTTTATGCCGA AFE_2038 1789376 - 1789245 - | hypothetical protein AFE_2039 1789661 - 1789506 - | hypothetical protein AFE_2040 1792056 - 1789693 - | TonB-dependent receptor TERM 1430 1790459 - 1790481 + g 71 -9.1 -3.74693 | opp_overlap 1790472 TTGTACGCCTGCGCG TAGCTGGCG AATAC CGCCAGCCA TTTCATGGGCTGCCA TERM 1431 1792115 - 1792139 + r 70 -2.7 -4.82901 | overlap 1792118 1792119 GCCGGTGAACGACAC CGCGGCCCG ATATGGG CGGGCTCTG TTTTTCTCGAAGAGG AFE_2041 1793237 - 1792284 - | hypothetical protein TERM 1432 1792576 - 1792556 - G 74 -3.2 -4.80396 | gap 1, overlap 1792557 CAAAATAGCCAAAAA GCACC-GGG CCCG CCCAGGTGA TGACCGAGATGAAGA AFE_2042 1793443 - 1793273 - | hypothetical protein AFE_2043 1796462 - 1793364 - | transporter, AcrB/AcrD/AcrF family TERM 1433 1793823 - 1793811 - GR 71 -10.5 -3.20382 | GGCGATAGCGATCAA GGCGG ATG CCGCC GCCCCCTGGCTGGTG TERM 1434 1794399 - 1794416 + gr 91 -14.1 -3.14211 | GCTTTGGCGCAGGGC GGCGGCC AGCC GGCCGCC TTCGTCACGGAGCGT TERM 1435 1795922 - 1795939 + gr 76 -9.8 -3.72695 | GGGCGATGTGCACCT CCGGCC AGCCCC GGCCGG TTTCGTCCACCCGAT AFE_2044 1797469 - 1796459 - | efflux transporter, RND family, MFP subunit AFE_2045 1798809 - 1797466 - | outer membrane efflux protein AFE_2046 1798937 - 1798806 - | hypothetical protein TERM 1436 1798894 - 1798929 + gH 84 -5.5 -4.88407 | gap 3, opp_overlap 1798892, overlap 1798893 TCCATCCATGCAATC GC-TGCC-GCCGCCA-GA CCT TCGTGACGGCTGGCACGC TTTTTCATTCCATCA AFE_2048 1798914 - 1799030 + | hypothetical protein AFE_2047 1799316 - 1799005 - | hypothetical protein TERM 1437 1799234 - 1799224 - G 81 -4.6 -5.0133 | overlap 1799196 GAGTCCGGGAAAAAA CACC TCG GGCG ACAGATTCAACAATG AFE_2049 1799351 - 1799557 + | hypothetical protein TERM 1438 1799607 - 1799627 + F 73 -8.9 -3.83205 | TCGGGCCCCGTCCGT CACGCTGGC AGC GCCGGGGTG TTTACTATACGACAT TERM 1439 1799934 - 1799950 + G 73 -9.3 -3.93288 | CACCCGCTGTCGGAC CCGGACC AGC GGACCGG TTTCCTTGCATGAAA AFE_2050 1799766 - 1799963 + | hypothetical protein AFE_2051 1800498 - 1800280 - | hypothetical protein AFE_2052 1800608 - 1801657 + | hypothetical protein TERM 1440 1802156 - 1802172 + G 70 -3.6 -4.58685 | opp_overlap 1802156 ACAAAAGTCAGGATA TCGCAG GCATG CGGCGA TTTTTCAAGCAGTTT xfp 1801753 - 1804200 + | xylulose-5-phosphate/fructose-6-phosphate phosphoketolase AFE_2054 1804287 - 1805069 + | hypothetical protein secF 1806329 - 1805316 - | protein-export membrane protein SecF TERM 1441 1805757 - 1805730 - GT 76 -6.2 -4.59773 | gap 1, overlap 1805731 1805732 GCTGATGGCGAAAAA GC-CCACCACCAG GAT CGGGTCGTGGAGC ATGGCGAGCACACCG TERM 1442 1806227 - 1806215 - GT 91 -7.7 -4.84761 | ACACGCCCAGAAAAA TCCAG CGT CTGGA CATGAAGTCTACATG secD 1808058 - 1806274 - | protein-export membrane protein SecD TERM 1443 1807507 - 1807522 + gr 81 -8.2 -4.36595 | overlap 1807508 AGCCTTTTGCGCCTG TGCCGC GACT GCGGCG TTTTCCATTTCGATG AFE_2058 1808405 - 1808070 - | preprotein translocase, YajC subunit TERM 1444 1808249 - 1808265 + g 74 -3.5 -4.80882 | overlap 1808244 TCGTCGCGATCAACT GGCGTTG TTC CTTCGCC TTTTTGGTCTGCGGT TERM 1445 1808361 - 1808343 - G 83 -2.2 -5.252 | overlap 1808346 1808347 GACTTGGATAAAAAA GGAGTCCG GAC CTGCCCCC GCCGCAGTCCCGGCA tgt 1809561 - 1808446 - | queuine tRNA-ribosyltransferase TERM 1446 1809226 - 1809201 - G 74 -3.9 -4.82901 | overlap 1809202 CCGGCCCCAGAAAAA CCATATGCCCA TCGG TGGGCGCACGA AACTGCACCCCGGCC queA 1810595 - 1809558 - | S-adenosylmethionine:tRNA ribosyltransferase-isomerase AFE_2061 1811953 - 1810604 - | CBS domain protein TERM 1447 1811462 - 1811428 - G 76 -12.8 -3.38046 | overlap 1811426 CCCGCAGCGCAAAGA GGCGCAGAACGATGCG AGT CGCACCGTTGAGCACC CAGATCGCCGGGTAC AFE_2062 1812561 - 1811968 - | CBS domain protein TERM 1448 1812096 - 1812075 - G 78 -2.9 -5.08824 | opp_overlap 1812090 GGCTGATGGAAAAAA CGCCGCGAA TCTC TTCACCACG GGGGGTTTCCTCACG TERM 1449 1812193 - 1812153 - G 72 -12 -3.31144 | gap 1, overlap 1812158 1812172 TGCGCAGGGTGAGAA CGATATCGCCGACAGTAGA GCGC TCTACT-TCGGCGAAGTCG AGTACGTCGACCTGC TERM 1450 1812188 - 1812158 - G 75 -13.5 -2.96452 | gap 1, overlap 1812153 1812172 AGGGTGAGAACGATA TCGCCGACAGTAGA GCGC TCTACT-TCGGCGA AGTCGAGTACGTCGA TERM 1451 1812269 - 1812283 + g 71 -5.6 -4.40804 | ATATGGTTTTCGGCC GCCAGT TTC ACCGGC TTTTCTCCCATGATA metZ 1813838 - 1812624 - | O-succinylhomoserine sulfhydrylase purF 1815262 - 1813835 - | amidophosphoribosyltransferase AFE_2065 1815767 - 1815270 - | CvpA family protein TERM 1452 1815636 - 1815609 - G 80 -14.8 -3.05596 | GATCTGCGCAGGCAA CTGGGGCGCCAG CCAA CCGCCGCCCCAG TTCCAGGCCACATAA folC 1817053 - 1815764 - | folylpolyglutamate synthase/dihydrofolate synthase accD 1817966 - 1817082 - | acetyl-CoA carboxylase, carboxyl transferase, beta subunit TERM 1453 1817912 - 1817923 + g 100 -5.8 -5.79588 | opp_overlap 1817906 CGCTCACAACGGAGG CCTC TGCC GAGG TTTTTTTGATTTTGG trpA 1818781 - 1817963 - | tryptophan synthase, alpha subunit trpB 1819977 - 1818778 - | tryptophan synthase, beta subunit trpF 1820605 - 1819988 - | N-(5'phosphoribosyl)anthranilate isomerase TERM 1454 1820558 - 1820513 - G 89 -15.9 -3.32963 | opp_overlap 1820519 1820520 ACTGCTACGGTAGAA CACCAGCCCGACGGCATCCGC GCCG GCGGCGGCCGCCGCGCGGGCG TCCTCCGTGTTCGTG TERM 1455 1820520 - 1820565 + g 82 -15.3 -3.17051 | gap 1, opp_overlap 1820513, overlap 1820519 CGGTAGAACACCAGC CCGACGGCATCCGCGCCGGCGG CGG CCGCCG-CGCGGGCGTCCTCCG TGTTCGTGATACCAC truA 1821475 - 1820660 - | tRNA pseudouridine synthase A TERM 1456 1821076 - 1821091 + g 78 -10.4 -3.86194 | TCCAGGCGGTGTGAT TCCGCC ATAG GGCGGA TTTCTCGCGACGATT AFE_2072 1823656 - 1821488 - | hypothetical protein TERM 1457 1821715 - 1821736 + gH 70 -5.1 -4.37886 | opp_overlap 1821706 CAGATACCGAGACGT CCGGTGC CAGTTCCA GTACCGG TTTTGTCCGAGGTCC TERM 1458 1822168 - 1822178 + gH 70 -3.2 -4.63218 | TGACGTACAGCTCCT TTCG CCG CGGA TTTTCTTCGAGGGCG TERM 1459 1822622 - 1822603 - GH 71 -10 -3.53012 | gap 1 CCTCCGCCCGGGAAA GGGCG-GCA AGC TGCGCGCCC TGAGCGGCCAGCAGG AFE_2073 1823646 - 1823741 + | hypothetical protein TERM 1460 1823733 - 1823743 + Tr 72 -2.4 -4.88736 | overlap 1823731 TACGGCGAGGTCTGT CGCC GAT GACG TTTTTATAGATAGTC asd 1824769 - 1823747 - | aspartate-semialdehyde dehydrogenase TERM 1461 1824571 - 1824554 - G 76 -9.1 -4.07568 | GGCTCCGGCGGAAAA CAGACCG ATAT CGGCCTG CGACCAATCGAACGT leuB 1825853 - 1824777 - | 3-isopropylmalate dehydrogenase TERM 1462 1825457 - 1825420 - G 72 -13.5 -2.63102 | gap 1 ACCACTTCCAGACCA CGCG-GCTGACCGAAG TAGATAT CCCCGGTCAGCTCGCG CACCACCAGGATGTC TERM 1463 1825545 - 1825529 - G 73 -4.3 -4.59853 | overlap 1825530 GCAACTGCGGAAAAA TCTGCGC GGG ACGCAGG TTCGCATAGAGATCC mobA 1826012 - 1826569 + | molybdopterin-guanine dinucleotide biosynthesis protein A mobB 1826566 - 1827060 + | molybdopterin-guanine dinucleotide biosynthesis protein B TERM 1464 1827984 - 1828000 + G 73 -4.3 -4.6526 | overlap 1827994 CTGCCCGGCAACCCC GTCTCCG CCA TGGTGAC TTTTTACCAGTTTGT moeA 1827063 - 1828304 + | molybdopterin biosynthesis MoeA protein nuc 1828954 - 1828313 - | endonuclease TERM 1465 1828577 - 1828566 - G 85 -2.2 -5.42259 | TGATTGGCAAAAAAA TCCG CCAC CGAA TATTTCTGGGTGCGC sppA 1830861 - 1829044 - | signal peptide peptidase SppA, 67K type TERM 1466 1829930 - 1829965 + g 81 -4.7 -4.90217 | gap 1 CTGGCGGTTGTGGAT GGTTTGGTTGC-CGCC AGATA GGCATGCAACCCAATC TTTTTGATGTGTTTA AFE_2081 1833978 - 1831069 - | alpha-amylase family protein TERM 1467 1831243 - 1831263 + g 70 -3.2 -4.72272 | gap 1 GGTATCGGTCCATAC CGCCTCACC TACC GGC-AGGCG TTTTTCGTCGCCGAG TERM 1468 1832424 - 1832452 + g 80 -14.5 -3.01712 | overlap 1832427 GTTTTTTTGCCTGTG CCACCGCCGCTTC CAC GTAGCGGCGGTCG TCTTCGGAGACCCGA TERM 1469 1832427 - 1832449 + g 77 -14.8 -2.73875 | overlap 1832424 TTTTTGCCTGTGCCA CCGCCGCTTC CAC GTAGCGGCGG TCGTCTTCGGAGACC TERM 1470 1833099 - 1833076 - G 70 -3.1 -4.59773 | gap 1 GTTGATGTCGAAAAA GCGG-CGATA ATTGA TCTCGTCCGC GGCGACCCGCCAATA AFE_2082 1835840 - 1833984 - | alpha-amylase family protein TERM 1471 1835123 - 1835109 - G 78 -7 -4.72272 | overlap 1835110 GTTGTGGATGAAAAA CGCGCG CAC CGTGCG GCTTCCGGGGCCATC AFE_2083 1837096 - 1835861 - | glycosyl transferase, group 1 AFE_2084 1837778 - 1837086 - | hypothetical protein AFE_2085 1838738 - 1838097 - | hypothetical protein TERM 1472 1838346 - 1838326 - G 76 -14.7 -2.62184 | GGTCCGGTCAGATCA GGCCTCCCG CCG CGGGAGACC ACAGCAGCGATAGCG AFE_2086 1839337 - 1838900 - | heat shock protein, Hsp20 family TERM 1473 1839040 - 1839067 + g 83 -2 -5.24449 | opp_overlap 1839027 1839026 1839040, overlap 1839030 AGCTACGGATGAAAC TTCCGTAGTATC GCTC GATTCTATGAAA TTTTTTCCCTTTCTC AFE_2087 1839485 - 1839339 - | hypothetical protein AFE_2088 1839676 - 1840683 + | zinc-binding alcohol dehydrogenase family protein AFE_2089 1840701 - 1841462 + | hypothetical protein TERM 1474 1842552 - 1842527 - g 74 -5.5 -4.564 | gap 1 AACGGGAAATGAAAA TACTGTTCCCCA AAC TGGGG-AGAGTA GCCGTTCCCTCGTGG AFE_2090 1841785 - 1842726 + | peptidase, M48 family TERM 1475 1842889 - 1842929 + G 73 -10.6 -3.63515 | gap 1, overlap 1842895 CCCAAGAGCATCGTT GGCTGATCACCATCGCC TTCATGCT GGCGATGGTGAT-GGTC TTGTTGGACATGACC TERM 1476 1842895 - 1842924 + G 75 -13.7 -2.85545 | overlap 1842889 AGCATCGTTGGCTGA TCACCATCGCC TTCATGCT GGCGATGGTGA TGGTCTTGTTGGACA TERM 1477 1843067 - 1843090 + G 71 -8.8 -3.7574 | gap 1, overlap 1843068 1843081 ATTGACCAGCCATCT TGCCGCC-CTC TTT GGGCGGCGGCG TCTTTTCCTCATCAG TERM 1478 1843376 - 1843386 + G 93 -6.8 -5.1615 | GTTCTACATCAACCT TCCC GTC GGGA TTTTTTCGCTCTTGC TERM 1479 1843459 - 1843439 - g 95 -2.4 -5.65927 | opp_overlap 1843439 1843437, overlap 1843440 GAGCGAAAGAAAAAA TCTGGCCA CCGAC TGGCCGGG TCTGTTGCTCATGGC AFE_2091 1842831 - 1844360 + | drug resistance transporter, EmrB/QacA family TERM 1480 1844680 - 1844670 - g 83 -2.4 -5.1848 | AATGAACCTAAAAAA GCAG TTA CGGC CCGGCCAGAGCAGGA AFE_2092 1844427 - 1844729 + | hypothetical protein AFE_2093 1845453 - 1844731 - | hypothetical protein TERM 1481 1845394 - 1845381 - G 74 -5.9 -4.56597 | overlap 1845383 CCCGGCGGGTAAAAA CCCGC TGCA GCAGG CGCTTGACGCGGGGT AFE_2094 1845863 - 1845543 - | hypothetical protein AFE_2095 1846232 - 1845873 - | hypothetical protein TERM 1482 1846976 - 1846998 + H 100 -13.4 -5.01535 | overlap 1846986 TTAACTAGCCTTTAC GTGCGGCGCT TAA AGAGCCGCAC TTTTTATAGTTGTAA AFE_2096 1847025 - 1847891 + | hypothetical protein AFE_2097 1847993 - 1849297 + | hypothetical protein AFE_2098 1849468 - 1849319 - | hypothetical protein AFE_2099 1849651 - 1849830 + | hypothetical protein AFE_2100 1850942 - 1851118 + | hypothetical protein TERM 1483 1851256 - 1851266 + T 77 -4 -5.03227 | opp_overlap 1851256 GTGGGTATGTATGAA TCAT TTG ATGA TTTTATTTCTAGTAT AFE_2101 1851498 - 1851256 - | hypothetical protein TERM 1484 1854095 - 1854080 - g 81 -6.1 -4.82901 | overlap 1854082 GCCGCCCCACAAAAA CACGG CGCTGC CCGTG GAAACTGCGACGGTG TERM 1485 1854944 - 1854933 - g 95 -4.4 -5.69473 | TATACCATAAAAAAA GACA AGGC TGTC ATGCAGGCCGTGCAA AFE_2103 1853988 - 1855082 + | efflux transporter, RND family, MFP subunit AFE_2104 1855079 - 1858183 + | transporter, AcrB/AcrD/AcrF family AFE_2105 1858209 - 1858928 + | ABC transporter, ATP-binding protein AFE_2106 1858921 - 1859646 + | ABC transporter, permease protein, putative AFE_2107 1859689 - 1860405 + | ABC transporter, permease protein, putative AFE_2108 1861232 - 1861032 - | hypothetical protein TERM 1486 1861677 - 1861641 - R 84 -13 -3.34043 | gap 1, overlap 1861643 1861647 TTGACCAGGGCACAA CACGAAGGGGCATCCGG CATT CCTGGTGCCCCTTCG-G CACGGGTGGAACTCC TERM 1487 1861676 - 1861643 - R 100 -16.7 -3.23869 | overlap 1861641 1861647 GACCAGGGCACAACA CGAAGGGGCATCCGG CATT CCTGGTGCCCCTTCG GCACGGGTGGAACTC TERM 1488 1861672 - 1861647 - R 73 -10.3 -3.42013 | overlap 1861643 1861641 AGGGCACAACACGAA GGGGCATCCGG CATT CCTGGTGCCCC TTCGGCACGGGTGGA gatB 1863134 - 1861698 - | glutamyl-tRNA(Gln)/aspartyl-tRNA(Asn) amidotransferase, B subunit gatA 1864603 - 1863131 - | glutamyl-tRNA(Gln)/aspartyl-tRNA(Asn) amidotransferase, A subunit TERM 1489 1864420 - 1864453 + g 71 -8.7 -3.84825 | gap 1, overlap 1864420 CCTCACCGGCCGCAC GCCGT-GCATCCGCCG TCG CGGCGGCGGCAAGGGC TTTGCTCTCGGTAAC gatC 1864900 - 1864613 - | glutamyl-tRNA(Gln)/aspartyl-tRNA(Asn) amidotransferase, C subunit TERM 1490 1864663 - 1864642 - G 75 -2.8 -4.91109 | overlap 1864643 TGGGGACGAGAAAAA GCCCGTGC TCAGCC GCCGGGGC ACTTGCCATGAGCAC TERM 1491 1864897 - 1864908 + g 73 -4.4 -4.61284 | TATCCTGATCGAATG CCAT AATT ATGG TTTTCCTTTCCTGTT AFE_2113 1865742 - 1864903 - | vacJ lipoprotein TERM 1492 1865007 - 1865032 + g 78 -7.5 -4.72272 | overlap 1865008 CGGCGGCCGGCGGCG GCAGTTGCAGG CCCT CCAGCAACTGG TTTTTACTGACCGCC TERM 1493 1865008 - 1865031 + g 74 -11 -3.43042 | overlap 1865007 GGCGGCCGGCGGCGG CAGTTGCAGG CCCT CCAGCAACTG GTTTTTACTGACCGC AFE_2114 1866404 - 1865745 - | hypothetical protein AFE_2115 1867552 - 1866449 - | radical SAM domain protein TERM 1494 1867367 - 1867390 + g 74 -11 -3.45324 | opp_overlap 1867364, overlap 1867366 1867386 AGCGCCGATACATTC CTCGACAGAC AGCC GCCTGTCGAG TGTTTCATCGGGATA AFE_2116 1868500 - 1867658 - | hypothetical protein AFE_2117 1869513 - 1868497 - | hypothetical protein TERM 1495 1869075 - 1869052 - G 84 -3.1 -5.27923 | overlap 1869054 CAATGCCAGAAAAAA TACCACCTG GAATTG CAGATGGTG GTCACTGACCGCGAA TERM 1496 1869337 - 1869295 - G 78 -4.8 -4.81551 | gap 1, overlap 1869298 1869306 CACCCATAGCAAAAA CCAGAAACGGACGC-GCGC CTCACC GCGCAGCAGCCACTTCCAG CCCAACACGTCCAGG AFE_2118 1872154 - 1869515 - | hypothetical protein TERM 1497 1871047 - 1871016 - G 95 -3.6 -5.73563 | overlap 1871022 1871023 ACGAAAGCAAAAAAA CTGAAAGCTGCCGC AACG GCGGCAAGGCTCAA GGCGCCGCCCATACC TERM 1498 1871038 - 1871022 - G 76 -9.3 -4.10795 | overlap 1871016 1871023 GCAAAAAAACTGAAA GCTGCCG CAA CGGCGGC AAGGCTCAAGGCGCC TERM 1499 1871184 - 1871173 - G 74 -5.8 -4.5448 | GACCGATAAAAAGAA TGGC AAAG GCCA CGGAAATAAGATTGA TERM 1500 1871352 - 1871364 + g 77 -3.3 -4.99435 | opp_overlap 1871344 AGAGAAACAGCGGCA CCCTG ACT CACGG TTTTTAATTGTTCCG AFE_2119 1873073 - 1872198 - | hypothetical protein TERM 1501 1872630 - 1872665 + g 91 -13.4 -3.89614 | gap 1 CTTCCCGACTTCCAG CATCTGCGTCAGCA-CC GTA GGATGCAGATGCAGATG TTTATGAGCATTGGC TERM 1502 1872791 - 1872772 - G 72 -2.8 -4.85782 | gap 1, overlap 1872774 TGTGGCAAAAAGAAA TAGC-GCAC CCC GCGCCGCCA GAGATCCGCAGCAAA TERM 1503 1872960 - 1873002 + g 77 -15 -2.71144 | gap 2, opp_overlap 1872958 CGCGACCATGAGACT GGCGGT-G-GTCAGCACACC ATCAC GGTGTGCGGACTCCACCGCC TCGTTCACCGCCATA AFE_2120 1874505 - 1873075 - | radical SAM domain protein TERM 1504 1874296 - 1874315 + g 89 -11.4 -4.16016 | opp_overlap 1874296 GATGCAGAGATCATA CCCTGCGG CAAC CTGCAGGG TTTCTTCGACACTGA AFE_2121 1875662 - 1874502 - | glycosyl transferase, group 2 family protein AFE_2122 1876694 - 1875705 - | hypothetical protein AFE_2123 1877404 - 1876691 - | MTA/SAH nucleosidase, putative TERM 1505 1877368 - 1877353 - G 83 -4.6 -5.08824 | overlap 1877355 1877356 CTGCGAGGGAAAAAA CACGCG CCTC CGCGTC CAGCGCCGCCACCAC TERM 1506 1877366 - 1877355 - G 71 -7.2 -4.17608 | overlap 1877353 1877356 GCGAGGGAAAAAACA CGCG CCTC CGCG TCCAGCGCCGCCACC shc 1879317 - 1877386 - | squalene-hopene cyclase TERM 1507 1877517 - 1877506 - G 84 -5.8 -5.00616 | TGGTGCGTTAAAAAA TGGC GCCT GCCA GCATCCATCCCCTTC AFE_2125 1880357 - 1879314 - | phytoene/squalene synthetase family protein TERM 1508 1880155 - 1880168 + g 100 -8.1 -5.75342 | opp_overlap 1880152 ACCTGAAGAAATTTG GCCTG CCAA CAGGC TTTTTTTTCCCAGGG gpsA 1881550 - 1880516 - | glycerol-3-phosphate dehydrogenase (NAD(P)+) secB 1882003 - 1881554 - | preprotein translocase, SecB subunit AFE_2129 1883144 - 1882734 - | virulence-associated protein, putative AFE_2130 1883371 - 1883141 - | virulence-associated protein, putative AFE_2131 1885194 - 1883674 - | aldehyde dehydrogenase (NAD) family protein TERM 1509 1883759 - 1883775 + g 89 -4.4 -5.24129 | gap 1, overlap 1883762 ATCATTTTGTGGGTT TCACGGC CTAC GCCG-GA TTTTTTGTAACCACC TERM 1510 1885957 - 1885924 - g 71 -8.8 -3.72695 | gap 1, opp_overlap 1885923 1885926 AGTTCCGCGATGAAA TC-CGGCCCCGCTTC GGGCT GATGCGCGGCCGTGA GTTCATCATGAAGGA TERM 1511 1886216 - 1886202 - g 85 -7 -4.74706 | overlap 1886204 GCCAACATGGAAAAA GCGGCG AGT CGCCCC GATCTGGCGGAAACG proS 1885497 - 1887209 + | prolyl-tRNA synthetase AFE_2133 1887196 - 1887678 + | universal stress family protein AFE_2134 1888356 - 1887691 - | lipoprotein, putative AFE_2135 1889299 - 1888361 - | mce-related protein TERM 1512 1889389 - 1889342 - H 83 -14.8 -2.66634 | gap 1, opp_overlap 1889340, overlap 1889339 TATTGGAGCACAGGA CGGGCGCCAAGCCAATGAC-CAC CCG GCGCGTCCATGGCTCGGCGCACG GATTGACTTGCCACA TERM 1513 1889979 - 1890024 + G 76 -6.1 -4.58395 | gap 2, overlap 1889981 1889982 GCCATTCTCGGTACC GGTCCGGCCATGGGGGTGCGG CGCATC CTGCACTCCC--GGCCGGGTG TTTTTGAGAGCTCGG TERM 1514 1889981 - 1890022 + G 82 -10.9 -3.90762 | gap 2, overlap 1889979 1889982 CATTCTCGGTACCGG TCCGGCCATGGGGGTGCGG CGCATC CTGCACTCCC--GGCCGGG TGTTTTTGAGAGCTC TERM 1515 1889982 - 1890021 + G 70 -12.2 -2.93975 | gap 2, overlap 1889981 1889979 ATTCTCGGTACCGGT CCGGCCATGGGGGTGCGG CGCATC CTGCACTCCC--GGCCGG GTGTTTTTGAGAGCT pcm-1 1889451 - 1890104 + | protein-L-isoaspartate O-methyltransferase TERM 1516 1890388 - 1890370 - g 74 -6.6 -4.36914 | overlap 1890371 GGCGCGGCGAGAAAA TCCGCCAG TGG CTGACGGC ACGGGATGATCGGCG TERM 1517 1890566 - 1890590 + G 87 -9.9 -4.431 | GCGACAAGCCGGGGT TACGGTCGCCG TCG CGGAGTCCGTA TTTTATGAATGGCTG AFE_2137 1890111 - 1890656 + | hydrolase, isochorismatase family AFE_2138 1890637 - 1892490 + | PDZ domain protein AFE_2139 1893293 - 1892493 - | conserved hypothetical protein TIGR00282 TERM 1518 1892604 - 1892586 - G 74 -6.6 -4.40804 | opp_overlap 1892585 CAGCAGGCCACAAAA GGTGGCCA CGC CGTCCACC GCTTCTCCGTGTCCG AFE_2140 1893868 - 1893293 - | 5-formyltetrahydrofolate cyclo-ligase family protein AFE_2142 1894413 - 1894099 - | hypothetical protein AFE_2143 1894698 - 1894441 - | hypothetical protein TERM 1519 1895738 - 1895748 + G 72 -2.4 -4.84311 | ATCCGCCAGGCTCCT GCGC CAA GCCC TTTTATTCTGTAGAG TERM 1520 1896618 - 1896593 - g 77 -3.1 -5.00616 | overlap 1896578 1896594 1896595 CGGTTGCCGAAAAAA CCGCGGCGCAT TATG ATGCGCCCCTT GCCATTGGGGAGAAA AFE_2144 1894765 - 1896675 + | penicillin-binding protein 2, putative rplY 1896688 - 1897296 + | ribosomal protein L25 TERM 1521 1897377 - 1897412 + G 76 -10.5 -3.70902 | gap 1, opp_overlap 1897347 CAATGCCGGCTTCTG GACGCTCCAGACCC TTGCGGATC GGGTC-GGGGCGTC TTTGCGTATGGAGAA TERM 1522 1897527 - 1897539 + G 71 -6.2 -4.4009 | overlap 1897506 TGGCGGCCCGGTGCA GGCC ATGGC GGCC TTTTATAAAGTAGCC TERM 1523 1897666 - 1897618 - g 74 -11.5 -3.53444 | GCAGCGCGGCTGAAA CGCGGTGGAGGTCATGGCGGCCA CAA CGGCCTCCGCGATCTCGACCGTG CCCTGGGCACACGGG pth 1897303 - 1897872 + | peptidyl-tRNA hydrolase ychF 1897882 - 1898973 + | GTP-binding protein YchF TERM 1524 1899199 - 1899182 - g 85 -6.3 -5.02074 | gap 1, opp_overlap 1899185 1899186, overlap 1899184 CCACTCTGGAAAAAA TCTGC-GC GGC GCTGCAGA TTCCCATCGCCGCGA AFE_2148 1899031 - 1899576 + | DNA-binding protein, putative TERM 1525 1899812 - 1899824 + G 78 -4.8 -4.8269 | overlap 1899819 GTCTTTCCAGATCGA TCCC CTCTC GGGA TTTTTCCTGATTCTG TERM 1526 1901197 - 1901209 + G 73 -4.7 -4.7219 | overlap 1901190 1901194 1901194 TCGGCATGGCCACCG CCCTG GGG CTGGG TTTTCTCTTGATCTG hyfB 1899573 - 1901555 + | hydrogenase-4, B subunit TERM 1527 1901663 - 1901653 - g 71 -8.2 -4.11484 | GGCAATCCTGCAAAA CCGG CGA CCGG CAGGCTGCTGGCAGA TERM 1528 1901869 - 1901879 + G 73 -4.6 -4.63527 | GGTGGGTTTGTTCGC CCTG GCC CGGG TTTTTCAGGTGCTGG TERM 1529 1902085 - 1902097 + G 78 -4.7 -4.78107 | overlap 1902086 CCCCAGCATGGCTTT CGCGG CCA CCGCC TTTTTCATCGTGCTG hyfC 1901552 - 1902493 + | hydrogenase-4, C subunit hyfE 1902495 - 1903172 + | hydrogenase-4, E subunit hyfF 1903172 - 1904626 + | hydrogenase-4, F subunit hyfG 1904637 - 1906184 + | hydrogenase-4, G subunit hyfI 1906221 - 1906718 + | hydrogenase-4, I subunit cbbL2 1906975 - 1908354 + | ribulose bisphosphate carboxylase, large subunit 2 TERM 1530 1908393 - 1908412 + F 100 -16.4 -4.63218 | opp_overlap 1908393 GTCAACCGGGTAAAA GCGCCCCC GAAC GGGGGCGC TTTTATTGAAAACGG TERM 1531 1908412 - 1908393 - f 100 -16.4 -4.11484 | opp_overlap 1908393 GTCAACCGGGTAAAA GCGCCCCC GAAC GGGGGCGC TTTTATTGAAAACGG TERM 1532 1908451 - 1908425 - f 74 -7.2 -4.18018 | CGCTTTTATTGAAAA CGGCCCCCAACA GCC TGTTTCGGACCG ACTCATTCCCTGTTT TERM 1533 1909022 - 1909068 + G 72 -10.9 -3.40403 | CACCAAGCAGCGCTT TACCGGCTTCGAGTTCGAC TATCCCAAC GCCGAACTGGAAGCCGGGA TTCTGGTGCAGGAAA cbbQ-2 1908504 - 1909322 + | CbbQ protein TERM 1534 1910247 - 1910267 + G 76 -7.5 -4.56597 | opp_overlap 1910237, overlap 1910248 GATAACTGGAGCCCG TTCCAGCGC CTG GCGGTGGAG TTTTTCGAGGACGCC TERM 1535 1911180 - 1911193 + G 71 -5.9 -4.4078 | CAACTCGGCGATCCG CTGGC CATT GCCGG TTTTAATTCCAACAC TERM 1536 1911330 - 1911273 - g 74 -11.3 -3.55071 | gap 3, opp_overlap 1911275, overlap 1911274 GGAGACGTCGTCAAA GGCCGCCTGGCGGCACTCCAGGCCGGTT ACTCG ACCCGGA-TGG-GCGCCGCCATGCG-CC ACGCGGGACACTATC AFE_2157 1909341 - 1911620 + | von Willebrand factor type A domain protein AFE_2158 1912532 - 1911627 - | transcriptional regulator, LysR family TERM 1537 1911697 - 1911670 - G 74 -5.5 -4.46212 | gap 1 TGGTTCAGCAGAAAA TCCCGGAAGGCC TGAGC GGCCG-CCGAGA GGCGCTTACCCTGAC phnA 1912876 - 1912535 - | alkylphosphonate utilization operon protein PhnA AFE_2160 1913597 - 1912890 - | hypothetical protein TERM 1538 1913359 - 1913387 + g 79 -8.8 -4.18197 | GCCAGCGAGCCACCG CCCAAGCCGATC ATCGC GATCCGCTCGGG TTTTGGCTGGAAGAT AFE_2161 1913830 - 1915695 + | hypothetical protein AFE_2162 1915692 - 1915805 + | hypothetical protein TERM 1539 1916304 - 1916326 + F 90 -12.1 -3.98826 | opp_overlap 1916298 TGCACATTATCGCCT TGGGCAAGA AGATC TCTTGCCCA TTTATGGCTTCATGC AFE_2163 1916382 - 1916969 + | hypothetical protein AFE_2164 1916988 - 1917176 + | hypothetical protein TERM 1540 1917404 - 1917440 + F 85 -2.3 -5.58454 | opp_overlap 1917421 TTATTTATCATTTTT TGCGTCTTCAATAATGA CAC TTATTATATGTGACGCA TTTTTTTGCTATCAA AFE_2165 1917733 - 1918266 + | hypothetical protein TERM 1541 1919007 - 1919022 + G 73 -10.4 -3.59979 | GAATTTATGAGCGTG CGAGGC AGGG GCCTCG TTTCGGATCCCGAAC AFE_2166 1918446 - 1919783 + | toxin secretion protein, HlyD family AFE_2167 1919780 - 1921951 + | toxin secretion ABC transporter, ATP-binding protein, HlyB family TERM 1542 1922038 - 1922048 + GT 91 -8.2 -4.72497 | TGATTCGCGGACCTA CCCC AAA GGGG TTTTCTTCCTGCATC TERM 1543 1923256 - 1923244 - gT 86 -10.5 -4.07687 | ATGCCGGGCTGAAAA GCGCC ATG GGCGC CTACGTGAACGCGCA AFE_2168 1923649 - 1923425 - | hypothetical protein AFE_2169 1921986 - 1923476 + | outer membrane toxin secretion efflux protein, putative AFE_2170 1923632 - 1924402 + | polysaccharide deacetylase family protein TERM 1544 1924900 - 1924889 - g 75 -3 -5.00616 | TCGGCGCCCAAAAAA TGAT CACC ATCA AACATATCAAGCGAC AFE_2171 1924414 - 1925781 + | GTP-binding protein AFE_2172 1925808 - 1927094 + | beta-lactamase AFE_2173 1927649 - 1927119 - | NUDIX hydrolase AFE_2174 1928174 - 1927731 - | NUDIX hydrolase rsuA 1928926 - 1928171 - | ribosomal small subunit pseudouridine synthase A TERM 1545 1928262 - 1928250 - G 83 -4.7 -5.14563 | overlap 1928251 TCGTCCAGCAAAAAA GGGCC GTA GGCCT CCCGATGCAGAGTCA TERM 1546 1929285 - 1929271 - g 78 -6.4 -4.60487 | CATTACCCTGAAAAA TGCTGC TGG ACAGCA TAAACTGATGGATTT AFE_2176 1928969 - 1930000 + | peptidyl-arginine deiminase, Porphyromonas-type TERM 1547 1930272 - 1930238 - g 71 -7.9 -4.08216 | gap 2, overlap 1930241 GTACCTTTCTTAAAA GCACCAGCGTCAGCGCC GTG GGCGC-GACGCTC-TAC CATCCCGACTGGATC TERM 1548 1931166 - 1931146 - g 71 -5.3 -4.40561 | overlap 1931148 TCGGCGCAAAAAGAA CCCGCCGTC ATC GACGCCAAG AGCGGTCAGGTGGTC TERM 1549 1931572 - 1931626 + G 73 -13.2 -2.78384 | opp_overlap 1931577 1931583, overlap 1931578 CGCAACATGTGGGCG CAAAAGGACA-ACCC-CAAGGCTCCGCC ACT GGC-GAGCCTTGCGGGTATG-CCTTTCG TCTACTGGGCCGCCA TERM 1550 1931621 - 1931577 - g 84 -11.7 -4.07885 | opp_overlap 1931572 1931578, overlap 1931583 CATGTGGGCGCAAAA GGACA-ACCC-CAAGGCTCCGCC ACT GGC-GAGCCTTGCGGGTATG-CC TTTCGTCTACTGGGC TERM 1551 1931578 - 1931621 + G 82 -11.9 -3.86202 | gap 3, opp_overlap 1931577 1931583, overlap 1931572 ATGTGGGCGCAAAAG GACA-ACCC-CAAGGCTCCGCC ACT GGC-GAGCCTTGCGGGTATGCC TTTCGTCTACTGGGC TERM 1552 1931614 - 1931583 - g 90 -15.2 -3.68359 | gap 1, opp_overlap 1931578 1931572, overlap 1931577 GGCGCAAAAGGACAA CCCCAAGGCTCCGCC ACT GGC-GAGCCTTGCGG GTATGCCTTTCGTCT sreA 1930213 - 1932942 + | sulfur reductase, molybdopterin subunit sreB 1932953 - 1933576 + | sulfur reductase, iron-sulfur binding subunit TERM 1553 1933717 - 1933751 + GF 73 -6.3 -4.4017 | gap 1 TTCCGGGCCAACCGG GCCGTCACCCTCTGGG GTAC CCTGGCGGGAGA-GGC TTTTCTGGGCGTTGG sreC 1933573 - 1934607 + | sulfur reductase, membrane subunit, putative TERM 1554 1934852 - 1934871 + GT 85 -7 -4.84017 | ATGCTGGACGGTTAC CGCGCCGG CGAA CTGGAGCG TTTTTATGGCCAGTT TERM 1555 1934974 - 1934962 - gT 80 -9.1 -4.07568 | opp_overlap 1934969 1934970, overlap 1934965 1934970 CTTTTTTCTCGAAAA GGACG ACA CGTCC GCGGCGGCCGATTTT sreD 1934549 - 1935115 + | sulfur reductase AFE_2180 1935768 - 1935091 - | hypothetical protein TERM 1556 1935449 - 1935464 + g 78 -4.6 -4.86731 | GCCACCTCCAATACC TGCCAG AGAT CGGGCA TTTTCTTTGGCAACC TERM 1557 1935732 - 1935709 - G 71 -8 -4.03978 | opp_overlap 1935719 1935719 AATTCTCCAGAGAAA CGCTCCCGCC GCTT GCCGGGATCG GTAAGGGACATCGTT TERM 1558 1935906 - 1935883 - R 77 -4.4 -4.84311 | CGCTACATAATAAAA CCTGAAGAGC CTTA GCGCGCCAGG TTGACACGCGGATTG AFE_2182 1936169 - 1935894 - | hypothetical protein AFE_2183 1936658 - 1936227 - | universal stress family protein AFE_2184 1938255 - 1936711 - | drug resistance transporter, EmrB/QacA family TERM 1559 1937053 - 1937072 + g 70 -10 -3.55444 | gap 1 CACCAGACTGTAGAT TGCGGTGCC GTT GGC-CCGCA TTTCCGGGCTCAGGG AFE_2185 1938701 - 1938258 - | transcriptional regulator, MarR family TERM 1560 1938636 - 1938652 + g 73 -13.7 -2.78384 | ACGATCCAGCGCGTG GCGCCAG GCT CTGGCGC TCTCATGCAGGGCCA TERM 1561 1939470 - 1939504 + G 74 -6.2 -4.54727 | opp_overlap 1939471, overlap 1939474 CATCTACAGTCGCAA AGCCCGTCCCGCCGGC GCA GTTGGCGGGATGTTCG TTTTCCTTTACGGCG TERM 1562 1939474 - 1939500 + G 93 -14.4 -3.78998 | opp_overlap 1939471, overlap 1939470 TACAGTCGCAAAGCC CGTCCCGCCGGC GCA GTTGGCGGGATG TTCGTTTTCCTTTAC lgt 1938886 - 1939704 + | prolipoprotein diacylglyceryl transferase TERM 1563 1941223 - 1941211 - g 85 -6.9 -4.84274 | overlap 1941213 GAAGGAGATGAAAAA GACGC CGC GCGCC GCTGGGAGAATATTC rep 1939726 - 1941714 + | ATP-dependent DNA helicase Rep TERM 1564 1941777 - 1941739 - T 100 -12.6 -4.42386 | gap 1, opp_overlap 1941746, overlap 1941744 TCGCCACCCATAAAA GCA-AAGAGGCGATCCA CACAAC CGGATCGCCTCTCCTGC TACGCAGTCCACACG TERM 1565 1941771 - 1941744 - T 100 -13.5 -4.27483 | opp_overlap 1941746, overlap 1941739 ACCCATAAAAGCAAA GAGGCGATCCA CACAAC CGGATCGCCTC TCCTGCTACGCAGTC rpsT 1942090 - 1941815 - | ribosomal protein S20 TERM 1566 1941930 - 1941956 + g 74 -12.3 -3.13403 | gap 1, overlap 1941928 1941932 TCGATGACCGACTCC GC-GGCGCGCAG TGCG CTGCGTGCCTGC TCTTGATCACCGACA TERM 1567 1941932 - 1941953 + g 73 -13.7 -2.77523 | overlap 1941930 1941928 GATGACCGACTCCGC GGCGCGCAG TGCG CTGCGTGCC TGCTCTTGATCACCG TERM 1568 1942033 - 1942043 + g 72 -2.4 -4.74012 | GCAGGCTGGCATTAT GCAG GCG CCGC TTTTCATTTTGTAAT TERM 1569 1942128 - 1942113 - R 73 -10.4 -3.39327 | opp_overlap 1942116 TCTCCATATCTACAA TCCCGC GTCT GCGGGA AATGAAGTCGCGTAT AFE_2189 1943239 - 1942226 - | ABC transporter, ATP-binding protein AFE_2190 1944062 - 1943259 - | ABC transporter, permease protein TERM 1570 1943345 - 1943328 - G 85 -2.7 -5.31877 | AGCGACCAGAAAAAA TACCC AGAGCAGA GGGTA AACCGCACTCAGCCC AFE_2191 1944076 - 1944291 + | hypothetical protein AFE_2192 1944279 - 1944716 + | hypothetical protein apaH 1944720 - 1945559 + | bis(5-nucleosyl)-tetraphosphatase (symmetrical) TERM 1571 1947148 - 1947132 - g 81 -5.8 -4.78572 | GCGCAACGAAGAAAA GCTGAC CCTGC GCCAGC ACGAAAGCCCGGTCC TERM 1572 1947169 - 1947155 - g 71 -9.2 -3.78775 | TGCGCCAGCACGAAA GCCCGG TCC CCAGGC AACGCGAACAACGCC TERM 1573 1947251 - 1947277 + G 70 -4.2 -4.56597 | overlap 1947252 GCCGTGAACTGGCGC AGGCCCAGGGCG TGC CGCCCTACGTCA TTTTTCACGACGCCA recQ 1945615 - 1947426 + | ATP-dependent DNA helicase RecQ TERM 1574 1947695 - 1947716 + G 73 -5.1 -4.72272 | gap 1 AACAGATTTGGCTGG CGTGCAGCGA TGG TC-CGGCACG TTTTTCGTGGCAGGG cyaY 1947514 - 1947828 + | cyaY protein AFE_2196 1947833 - 1948285 + | hypothetical protein AFE_2198 1948275 - 1948373 + | hypothetical protein AFE_2197 1948776 - 1948351 - | hypothetical protein AFE_2199 1949812 - 1948739 - | YjgP/YjgQ family protein AFE_2200 1950930 - 1949809 - | YjgP/YjgQ family protein TERM 1575 1950631 - 1950601 - G 79 -8.8 -4.18494 | overlap 1950603 CAGTTCCAGGCAAAA GACGCACGCCGCAA CCA CCGCGACGGGCGGC AGAAGTCCCGACAGC TERM 1576 1950629 - 1950603 - G 73 -10 -3.69216 | overlap 1950601 GTTCCAGGCAAAAGA CGCACGCCGCAA CCA CCGCGACGGGCG GCAGAAGTCCCGACA TERM 1577 1950737 - 1950727 - G 100 -2.4 -5.76949 | GACCGCGAAAAAAAA GGCC AGA GGCA ATACCATGACCAGCA TERM 1578 1951612 - 1951581 - g 76 -13 -3.40403 | overlap 1951592 GGTGCCGTAGCAGAA GCCCAAGCAACGGC CCGC GCAGTCGCTTGGAC CCGGGATATGGCCAA TERM 1579 1952034 - 1952018 - g 95 -13.7 -4.07568 | GCCCGCTTCGGAAAA CCTGCCC GAC GGGCAGG CCACCAAACCCGGCG pepA 1951047 - 1952549 + | cytosol aminopeptidase holC 1952562 - 1952987 + | DNA polymerase III, chi subunit AFE_2202 1953743 - 1952940 - | hypothetical protein TERM 1580 1953072 - 1953043 - Gf 73 -9.9 -3.61398 | opp_overlap 1953043, overlap 1953029 1953028 1953048 CCCGTCCTTGAAGAA CAGATGGACGTCG ATGA CGACGCCCCGCTG TTGCTCACCAACCTT TERM 1581 1953256 - 1953287 + gF 83 -12.9 -3.30771 | opp_overlap 1953256 ATGCGTTGGGAGGAA GCTGCGGCAGCGC GCAATG GCGCAGCAGCAGC TTCTGGAGAATATGC TERM 1582 1953287 - 1953256 - Gf 81 -12.9 -3.14211 | opp_overlap 1953256 ATGCGTTGGGAGGAA GCTGCGGCAGCGC GCAATG GCGCAGCAGCAGC TTCTGGAGAATATGC valS 1953693 - 1956509 + | valyl-tRNA synthetase TERM 1583 1956964 - 1956999 + G 100 -19.1 -3.45023 | CAGACGGTTGGGGAA TCCCGATGGCGACGG ATATTG CCTTCGCCATCGGGA TTCTCGTCCTGCTCG TERM 1584 1957252 - 1957272 + G 84 -5.3 -4.89393 | opp_overlap 1957256, overlap 1957265 1957266 TGATACTCTCCGGAA TCCACGCCA CGG TGGCCGGGA TTTTTCTGGCGTTTA nhaA 1956585 - 1957895 + | Na+/H+ antiporter NhaA TERM 1585 1958329 - 1958315 - g 73 -4.2 -4.59773 | overlap 1958317 CGTCACGCGCAAAAA TATGCG GTG CGCATC GGTGGCGGACACAAC TERM 1586 1958414 - 1958386 - g 70 -5.1 -4.45544 | overlap 1958387 TCTCATCAAGGAAAA TCACATCGCTGCC TGC GGCAGCATCGCGG CGGCACTGCAGGCGG nadC 1957892 - 1958719 + | nicotinate-nucleotide pyrophosphorylase AFE_2207 1959976 - 1958732 - | hypothetical protein TERM 1587 1959541 - 1959531 - G 83 -4.6 -5.08824 | TCCTGATTGAAAAAA CGGA TTT CCCG GCCCTTCTGCGCCTC TERM 1588 1960123 - 1960104 - H 71 -10.8 -3.29144 | opp_overlap 1960104 1960103 1960106 GCATTTCCTTGACAA GATACCGA TTGG TCGGTATC CTTAATTGCATGATG TERM 1589 1960648 - 1960704 + G 86 -12.2 -3.91488 | gap 1, opp_overlap 1960655, overlap 1960690 CTTCATCGTTGCCGC CATCGA-AGGCTGCGTCGGCCTGGGCA AAAA TGCGCAGTCCGTCGAAGCCTATCGGCG TTGTTTGCGACAGTT TERM 1590 1960696 - 1960655 - g 80 -14.3 -3.05384 | opp_overlap 1960648 1960690 GTTGCCGCCATCGAA GGCTGCGTCGGCCTGGGCA AAAA TGCGCAGTCCGTCGAAGCC TATCGGCGTTGTTTG AFE_2209 1960136 - 1960750 + | transcriptional regulator, TetR family AFE_2208 1960855 - 1960736 - | hypothetical protein TERM 1591 1961450 - 1961468 + GH 83 -4.4 -5.03314 | overlap 1961451 TACCCTGACCGTGTT TCCGGGTG CGC CACACGGC TTTTTTGCGGATCCC AFE_2210 1960842 - 1961570 + | carboxymethylenebutenolidase family protein AFE_2211 1961567 - 1962643 + | oxidoreductase, FAD/FMN-binding TERM 1592 1962712 - 1962686 - T 80 -4.3 -5.00616 | gap 1, overlap 1962687 1962688 CGGGGTGGCAAAAAA CGC-GCTTGCGG CGGC CCGCAGGGAGCG GTAATAAAGGGTGTC AFE_2212 1963352 - 1962726 - | hypothetical protein TERM 1593 1963211 - 1963244 + g 78 -13.2 -3.24146 | gap 3, overlap 1963211 1963212 TTGGCCAGTCCTGCT G-GGCGTCGCCGCC-GG CGC CCAGGCGGCG-CGCCGC CTTTTCCTTGGCCAC TERM 1594 1963211 - 1963243 + g 72 -13.4 -2.54166 | overlap 1963211 1963212 TTGGCCAGTCCTGCT GGGCGTCGCCGCC-GG CGC CCAGGCGGCG-CGCCG CCTTTTCCTTGGCCA TERM 1595 1963212 - 1963245 + g 93 -11.6 -4.4078 | gap 1, overlap 1963211 1963211 TGGCCAGTCCTGCTG GGCGTCGCCGCCGGC GCCCA GGCGGCG-CGCCGCC TTTTCCTTGGCCACC AFE_2214 1963560 - 1964126 + | hypothetical protein TERM 1596 1964691 - 1964672 - g 93 -7.8 -5.07486 | opp_overlap 1964676, overlap 1964654 1964673 TATTCCGAAGAAAAA GCCATCCG GACG CGGATGGT TGCCATTGATCAGGC TERM 1597 1964690 - 1964673 - g 77 -11.3 -3.63768 | opp_overlap 1964676, overlap 1964654 1964672 ATTCCGAAGAAAAAG CCATCCG GACG CGGATGG TTGCCATTGATCAGG AFE_2215 1964159 - 1964953 + | methyltransferase, FkbM family TERM 1598 1965509 - 1965523 + G 71 -7.8 -4.10007 | overlap 1965503 TCTTTATCCTGGTGC GCCATG CAC CGTGGC TTTTCAGGGCGTTGT AFE_2217 1965070 - 1965963 + | hydrolase, alpha/beta hydrolase fold family AFE_2216 1966525 - 1965956 - | hypothetical protein AFE_2218 1967314 - 1966631 - | HAD-superfamily hydrolase, subfamily IA TERM 1599 1966732 - 1966692 - G 84 -11.7 -4.07568 | GTGGGGTCGGCAAAA CACATCGCGGCACCGCTGG CAT CCAGGCGTTCCGCGCCGTG TACGCCGCAGAGCAC rluC 1968264 - 1967311 - | ribosomal large subunit pseudouridine synthase C TERM 1600 1968640 - 1968657 + G 74 -6.9 -4.38712 | overlap 1968642 CGCCTTCGTCGACTA CGGTGCC GAAC GGCACGG TTTTCTGCCCCTCAA TERM 1601 1969094 - 1969117 + G 76 -9.6 -4.09243 | gap 1, overlap 1969099 CAGGAGGGTAATGTC GTGGTTCGCGC CCT GCGCG-ATCAC TTTTCCGAGGATATC TERM 1602 1970310 - 1970272 - g 77 -7.9 -4.32034 | gap 1, overlap 1970274 CGATGAGCAGGAAAA CAGCGGCGAGGGGCGCAG TGGC CGGCGCCGG-CGCCGCGG TGGACGCCGGGCGCG TERM 1603 1970308 - 1970274 - g 71 -9.1 -3.76141 | gap 1, overlap 1970272 ATGAGCAGGAAAACA GCGGCGAGGGGCGCAG TGGC CGGCGCCGG-CGCCGC GGTGGACGCCGGGCG AFE_2220 1968461 - 1970809 + | ribonuclease, Rne/Rng family cysS 1972240 - 1970852 - | cysteinyl-tRNA synthetase TERM 1604 1971170 - 1971151 - G 85 -6.4 -4.8048 | gap 1, overlap 1971154 GGGCCAGATCAAAAA GCACGGCAA GGG CTGCCG-GC GTATGAAAATCATCA gltX-1 1973763 - 1972237 - | glutamyl-tRNA synthetase TERM 1605 1972388 - 1972422 + g 74 -6.4 -4.36914 | gap 1, opp_overlap 1972387 1972388 AGGGGCATGAACAAC GCCTTGCCGCGACGC CCGCTA GCCT-GCTGCAAGGC TTTTGTCCAGCGCCG TERM 1606 1973100 - 1973087 - G 100 -3.7 -6.06723 | TTGGCGAAAAAAAAA GCCGG GCTG CCGTC GCTGCGACGGATGAC TERM 1607 1973758 - 1973719 - G 85 -18.2 -2.63112 | opp_overlap 1973730, overlap 1973721 1973730 1973744 AAAGCCGGGATAGGA TACTTCGCAAAGTGCA GGCCAGAA TGCACTTTGCGAAGTA CTCATACATACGGAA TERM 1608 1973756 - 1973721 - G 81 -16.4 -2.8547 | opp_overlap 1973730, overlap 1973719 1973730 1973744 AGCCGGGATAGGATA CTTCGCAAAGTGCA GGCCAGAA TGCACTTTGCGAAG TACTCATACATACGG TERM 1609 1974992 - 1974970 - g 91 -5.4 -5.31456 | overlap 1974971 GGAAGGCAGAAAAAA TGTCACGCTG ACC CTGCGCGACG TCAACTGGGCACGCC TERM 1610 1974991 - 1974971 - g 71 -8.9 -3.77789 | overlap 1974970 GAAGGCAGAAAAAAT GTCACGCTG ACC CTGCGCGAC GTCAACTGGGCACGC AFE_2223 1973783 - 1976272 + | penicillin-binding protein 1A, putative TERM 1611 1978377 - 1978431 + G 73 -9.9 -3.57462 | gap 1, overlap 1978378 1978379 TCTGGCGTCTGCGCC AGCGGCCGCGTCAACTGCCCGCAG GACAGGAA CTGC-GGCTGTTGTTGCGGGCGCC TTTCACCGTACACTG TERM 1612 1978378 - 1978430 + G 73 -13.4 -2.74263 | gap 1, overlap 1978377 1978379 CTGGCGTCTGCGCCA GCGGCCGCGTCAACTGCCCGCAG GACAGGAA CTGC-GGCTGTTGTTGCGGGCGC CTTTCACCGTACACT AFE_2224 1976273 - 1978633 + | glycosyl hydrolase, family 15 AFE_2225 1978630 - 1979415 + | glucose 1-dehydrogenase, putative AFE_2226 1979574 - 1981256 + | hypothetical protein TERM 1613 1981268 - 1981278 + F 76 -5.4 -4.7889 | ATAACACCATGTCCA TACG CGC CGTA TTTTTCGATCTTTAT TERM 1614 1981468 - 1981435 - g 82 -11.8 -3.89435 | CTGAAAGAAGGGAAA CGCCAATCTCCGGA AAGATA TCCGGAAATCGACG TGGAGGCGATCTGGC AFE_2227 1981381 - 1982007 + | HAD-superfamily hydrolase, subfamily IA kdpE 1982803 - 1982060 - | DNA-binding response regulator KdpE TERM 1615 1982433 - 1982412 - G 74 -11.5 -3.53012 | overlap 1982413 GGTCGTCGCCGCAAA TGCGCGCGC AGGC GCGCGAGCA GCTCGCCAATGGTAA kdpD 1985548 - 1982807 - | sensor histidine kinase KdpD TERM 1616 1984935 - 1984905 - G 89 -6.8 -5.08824 | CCTTTACGGAAAAAA TGGGTCATCGCG CGCTGAC CGCGATCGCCCA GGTACACCTTACCCT AFE_2230 1985780 - 1985914 + | hypothetical protein kdpF-2 1985911 - 1986003 + | K+-transporting ATPase, F subunit TERM 1617 1986499 - 1986487 - g 71 -5.5 -4.36914 | TCGCCCGTCATAAAA CCAAG GAT CTCGG AAATTTCTGGGTCGA TERM 1618 1987604 - 1987594 - g 95 -6.8 -5.35224 | overlap 1987595 1987596 TCGAGAAAAAGAAAA TCCC CGC GGGA TCGGGAACACTGACG kdpA-3 1986000 - 1987751 + | K+-transporting ATPase, A subunit kdpB-2 1987764 - 1989833 + | K+-transporting ATPase, B subunit kdpC-2 1989846 - 1990466 + | K+-transporting ATPase, C subunit TERM 1619 1990669 - 1990683 + G 79 -9.2 -4.15565 | CATTTATGGATTCCT GGCCGG CAC CTGGCC TTTTGGCGTGATCGA AFE_2235 1990514 - 1990780 + | hypothetical protein AFE_2236 1990832 - 1990930 + | hypothetical protein TERM 1620 1991448 - 1991474 + G 80 -10.1 -4.08767 | opp_overlap 1991446 GATAAAAAATGAGGT TGCGGCGCCTC GTTCG GAGATGCCGCA TTTTACCGCAATCCC AFE_2238 1990978 - 1991508 + | amino acid kinase family protein AFE_2237 1991758 - 1991495 - | hypothetical protein TERM 1621 1991641 - 1991654 + gF 71 -9.5 -3.551 | opp_overlap 1991627 1991623 1991641, overlap 1991621 ATCGGCGCTCAATGA CGCGG ATTT CCGCG TTATCTGCGTTGGGG TERM 1622 1992281 - 1992267 - gH 77 -7.2 -4.24342 | TGGGCCATCAACAAA GAAAAC AGC GTTTTC TTCCAGGCCGGCGGC TERM 1623 1992494 - 1992504 + GH 77 -8.2 -4.11484 | opp_overlap 1992482 CAACACCAGCACTAT CGGC GCT GCCG TTTTGGCAGATTACA AFE_2239 1991751 - 1992794 + | hypothetical protein glnK-2 1992850 - 1993248 + | nitrogen regulatory protein P-II 2 AFE_2241 1993245 - 1993544 + | hypothetical protein AFE_2242 1993603 - 1993962 + | hypothetical protein AFE_2243 1993972 - 1994064 + | hypothetical protein TERM 1624 1994054 - 1994042 - f 77 -7.7 -4.36914 | GGTTTGCCGACAAAA CGCAA TTT TTGCG GAAGGAATAATCTGC TERM 1625 1994412 - 1994434 + G 72 -2.6 -4.78149 | opp_overlap 1994403, overlap 1994396 CCAACATCTCCTCCG GGGAGAAGCG GCT CAGTTCTTCC TTTTTCGGTTATCAC AFE_2244 1994243 - 1994515 + | hypothetical protein TERM 1626 1995200 - 1995217 + G 78 -2.7 -5.15117 | overlap 1995199 GAAAGTCTGCTTAAC GATGGTA CGGC TATCGTC TTTTTTAGCCTTTTC TERM 1627 1995399 - 1995411 + G 70 -4.7 -4.54821 | CCATCACCATTCTCG CGGCC TAT GGCAG TTTTCTCGTTGCGAT AFE_2245 1994717 - 1995910 + | Na+/H+ antiporter, putative AFE_2247 1996010 - 1996174 + | hypothetical protein AFE_2246 1996772 - 1996167 - | dsbG domain protein AFE_2248 1997327 - 1996887 - | lipoprotein, putative TERM 1628 1997177 - 1997197 + Gg 78 -2.5 -5.03715 | overlap 1997179 CAGCAATCGGCTTTT TTTCTGCTG GTA TGGCGGAGA TTTTTTGGAGATCCT AFE_2249 1997133 - 1997552 + | hypothetical protein TERM 1629 1997836 - 1997816 - TR 100 -13.9 -5.4251 | TGGATATACAAAAAA GCCGGGGGG AAT CCGCCCGGC AAACAAGGAGAAGGT AFE_2250 1999076 - 1997955 - | carbohydrate-selective porin, OprB family AFE_2251 2000276 - 1999089 - | PQQ enzyme repeat domain protein TERM 1630 2000031 - 2000009 - G 76 -9.8 -3.77666 | CAGACGCAACCCAAA CCTGTCCATG ACC CACGGTCAGG GGCATTAGAATTGTC AFE_2252 2000631 - 2001302 + | Tat (twin-arginine translocation) pathway signal sequence domain protein TERM 1631 2001826 - 2001839 + G 70 -3.1 -4.58395 | gap 1, overlap 2001823 2001821 ATTCCGGCATCACTG CC-ACC GGC GGTAGG TTTTTCCAGCGTCAA TERM 1632 2002303 - 2002317 + G 74 -11.4 -3.53224 | opp_overlap 2002299 GTGCGGACCAACAGC GACGGC ATC GCCGTC TTTCCGAAACCCATC TERM 1633 2002593 - 2002609 + G 79 -9.3 -4.2558 | overlap 2002587 GCACCTCATCGTCCG CCGGCCC GGC GGGCAGG TTTTCCTGGACACTG TERM 1634 2003930 - 2003897 - g 71 -8 -4.08216 | gap 1, overlap 2003898 GGATTCCGGTGAAAA CCCGCC-CCGGCGCC TATGT GACGCTGGCGGCGGT CGATAAAGGCATCCT AFE_2253 2001409 - 2006118 + | hypothetical protein TERM 1635 2007973 - 2007990 + G 85 -6.9 -4.74012 | overlap 2007975 GGTCAGTATTCGCGT GCTCGGC GGCA GCCGACC TTTTCATTTTCTGGT AFE_2254 2006126 - 2008192 + | penicillin-binding protein 1C, putative AFE_2255 2008829 - 2008488 - | hypothetical protein TERM 1636 2008651 - 2008598 - G 74 -3.7 -4.84359 | gap 1, opp_overlap 2008614, overlap 2008599 CCACCGGCATAAAAA GTGCCGTATGCCTGTCACA-GCGAAC GCT GATCTCCTGTGCCGGACATTCGGCAA GACCAGAGCTGATAT AFE_2256 2009645 - 2008854 - | metallo-beta-lactamase family protein AFE_2257 2010544 - 2009789 - | hypothetical protein AFE_2258 2011435 - 2010545 - | hypothetical protein AFE_2259 2011997 - 2011464 - | universal stress family protein TERM 1637 2011762 - 2011779 + g 81 -7.7 -4.64676 | overlap 2011763 TGTTCCTGTATACGC TCTGCGA CACC TCGCAGG TTTTCTTCCGCCTCG TERM 1638 2011805 - 2011818 + g 70 -3.7 -4.62783 | CCTCGATGCGAGCAT CCGCC AGCA GCCGG TTTTTGAGATCGCTG TERM 1639 2012178 - 2012203 + H 100 -12.7 -5.37593 | gap 1 CCATCAGGAGGTTTG GGTACGA-CAGG TCT CCTGATCGTACC TTTTTTAGTTTGGAC TERM 1640 2012906 - 2012892 - g 89 -11.4 -4.2528 | CTGCAATTTAAGAAA GCGCAG GAT CTGCGC TACGGCGAAAATCCT purH 2012238 - 2013812 + | phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase TERM 1641 2014287 - 2014267 - g 93 -16.1 -3.55444 | CCGGTAGTGGTCAAA GCCGACGGC CTC GCCGCCGGC AAAGGAGTCGTCGTG purD 2013826 - 2015088 + | phosphoribosylamine--glycine ligase AFE_2262 2015104 - 2015664 + | Sua5/YciO/YrdC family protein TERM 1642 2016110 - 2016133 + G 74 -7.4 -4.386 | gap 1, opp_overlap 2016109 2016108 GGTATTCTCAAAACC GCCTGTGATCG TCA CGACC-CAGGC TTTTATCCGCGCTTC hemF 2015669 - 2016559 + | coproporphyrinogen III oxidase, aerobic TERM 1643 2017014 - 2017002 - g 70 -3.3 -4.58283 | overlap 2017008 2017010 CAATCTCGGCAAAAA CAAGG ACA CCCCG CTGGAGCGGGCGCAG pyrD 2016556 - 2017647 + | dihydroorotate dehydrogenase AFE_2265 2017807 - 2017956 + | lipoprotein, putative TERM 1644 2018463 - 2018444 - g 73 -4.2 -4.58395 | opp_overlap 2018444 GCGATGCTGGAAAAA CTCTCCGA CAAA CCGGACAG TGGTTTCCTGGTGGC AFE_2266 2018240 - 2018821 + | acetyltransferase, GNAT family AFE_2267 2020396 - 2018825 - | phosphoesterase family protein TERM 1645 2019567 - 2019586 + g 78 -4.2 -4.78107 | gap 1, overlap 2019556 2019567 2019568 GGTCCCTGCAGCGGC G-GCAGGTC GTT GACCAGCAC TTTTTGGTGGTCATA AFE_2268 2021169 - 2020456 - | TonB family protein TERM 1646 2020525 - 2020545 + g 71 -9.7 -3.74224 | overlap 2020528 CGGCATATCTTTGGA GAAGGGCGG GTA CTGTCCTTC TTTCACTGATTTCAA AFE_2269 2021592 - 2021191 - | biopolymer transport protein, ExbD/TolR family AFE_2270 2022275 - 2021592 - | MotA/TolQ/ExbB proton channel family protein AFE_2271 2023056 - 2022340 - | transcriptional regulator, putative TERM 1647 2023252 - 2023218 - R 91 -14.3 -3.10245 | opp_overlap 2023222 GTACCGCAATACACA GGATTTGCGGAGACC GCAGT GGTCTCCGCTACTCC AACCAGGCATGGAAG AFE_2272 2023789 - 2023277 - | hypothetical protein TERM 1648 2023651 - 2023664 + g 71 -8.1 -4.11216 | opp_overlap 2023651 2023650 AGTAGGCGTAGAAAT TGGCG ACCC CGCCA TTTTCCACATAGGCC TERM 1649 2023852 - 2023838 - H 100 -9.2 -5.30686 | opp_overlap 2023837 AATAGTGACAAAAAA CCCGGC AGA ACCGGG CTCCTTCGCTATTGT TERM 1650 2023965 - 2023952 - H 91 -6.7 -5.252 | overlap 2023956 TATTGTCACAAAAAA GTCAC CTCC GTGAC GCACTGCTGTCACAT TERM 1651 2024755 - 2024792 + G 73 -10.5 -3.68619 | overlap 2024723 2024790 GCCCTGGTCGCCACC GCCACCGGCCTGTTCGT CGCC ATGACCGGCCTGGTGGC TTTCAATGCCTTCAA AFE_2273 2024266 - 2024958 + | MotA/TolQ/ExbB proton channel family protein AFE_2274 2024992 - 2027880 + | hypothetical protein AFE_2275 2027955 - 2028683 + | TonB family protein AFE_2276 2028722 - 2029321 + | hypothetical protein TERM 1652 2030549 - 2030563 + G 75 -2.7 -4.91109 | overlap 2030532 CCTGTTCCCGCGTGG CGGCG ACGAC CTCCG TTTTTCTGCTGCCCA AFE_2277 2029360 - 2030757 + | major facilitator family transporter phnG 2030857 - 2031333 + | phosphonate metabolism protein PhnG phnH 2031330 - 2031872 + | phosphonate metabolism protein phnH phnI 2031876 - 2032973 + | phosphonate metabolism protein PhnI phnJ 2032970 - 2033794 + | phosphonate metabolism protein PhnJ phnK 2033791 - 2034573 + | phosphonate ABC transporter, ATP-binding protein PhnK phnL 2034570 - 2035268 + | phosphonate ABC transporter, ATP-binding protein PhnL AFE_2284 2035265 - 2036401 + | phnM protein, putative TERM 1653 2036859 - 2036877 + G 78 -2.2 -5.03314 | overlap 2036862 2036863 CTTGCCAATCTGGAG CGCTGGGG ATA CCCCTATG TTTTTTCGGAATGGG AFE_2285 2036409 - 2037086 + | hypothetical protein AFE_2286 2037079 - 2037624 + | PhnN protein, putative AFE_2287 2037621 - 2038373 + | transcriptional regulator, GntR family AFE_2288 2040813 - 2038483 - | TonB-dependent receptor AFE_2290 2041035 - 2041256 + | hypothetical protein AFE_2291 2041394 - 2041534 + | hypothetical protein AFE_2292 2043985 - 2041664 - | TonB-dependent receptor TERM 1654 2041865 - 2041855 - G 70 -4 -4.62302 | TAATATGGTTAAAAA CAAA TGT TTTG TAGCTGGCCGATAAG TERM 1655 2042916 - 2042939 + g 76 -6.1 -4.71061 | gap 1 GCCTGATGCAGGCGG TACG-CATGG CGATA CCATGGCGTA TTTTTAAGTGTCCAT TERM 1656 2044244 - 2044270 + r 81 -3.6 -5.24129 | TGTTAGCAGCCCAAT GTGACAGCAATG CGT CAATGCAGTGAC TTTTTTGTGACAACC AFE_2293 2044377 - 2044258 - | hypothetical protein TERM 1657 2044824 - 2044850 + H 73 -5.7 -4.52857 | gap 1, overlap 2044825 TGTGGTCTCTCCTGG AGGCAGC-CCGC GAGC GCGGGGCGGCCG TTTTCTGTGCCACCT AFE_2295 2044926 - 2045183 + | hypothetical protein AFE_2296 2045521 - 2045832 + | hypothetical protein TERM 1658 2046555 - 2046592 + G 74 -6.1 -4.57837 | gap 1, opp_overlap 2046554 TACCTCATCAACAAC CTGCCGCCGTTG-CAGGG CCC CACGGACGAAGGCGGCGG TTTTTGGGACCATGT AFE_2297 2046144 - 2046842 + | phosphoesterase family protein TERM 1659 2046971 - 2046985 + G 73 -4.2 -4.62783 | overlap 2046965 CTGCCTTGCGCAACG CGGTAG CCT TTGCCG TTTTTACCCTCGGTA AFE_2298 2046937 - 2049144 + | TonB-dependent receptor TERM 1660 2049170 - 2049148 - f 100 -14.8 -4.58395 | opp_overlap 2049153 2049154 2049155 GCCACCTTCTAAAAA CCCGGACGGG TGC CCCACCCGGG ACACCCCCTTTTTCA TERM 1661 2049153 - 2049178 + F 71 -4.5 -4.62336 | opp_overlap 2049148, overlap 2049154 2049155 CTTCTAAAAACCCGG ACGGGTGCCCC ACCC GGGACACCCCC TTTTTCAAATGGAGT AFE_2299 2049200 - 2049877 + | MotA/TolQ/ExbB proton channel family protein AFE_2300 2049895 - 2050269 + | biopolymer transport protein, ExbD/TolR family TERM 1662 2050376 - 2050388 + G 80 -3.3 -5.10461 | GGAACTGCTGGTAAT CGGCA ACA TGGCG TTTTTCTTCCGTCAG AFE_2301 2050275 - 2051003 + | TonB family protein AFE_2302 2051024 - 2053240 + | TonB-dependent receptor TERM 1663 2053867 - 2053855 - g 85 -6.2 -5.02074 | TGATTTTCCAAAAAA CCGG GCCCT CCGG ACAGTGGCGGACCGA TERM 1664 2054307 - 2054291 - g 84 -10.1 -4.18018 | CGTGGCCATGGAAAA CCGCGAC AGC ATCGCGG TCGTCGACACCCAAA TERM 1665 2054615 - 2054633 + G 70 -10.3 -3.4247 | opp_overlap 2054610 2054614 2054611, overlap 2054614 2054628 CAACAATAAATCCAT TCCCGGA GCCAA TCCGGGA TATTGTTCCGGTTAT AFE_2303 2053341 - 2056178 + | hypothetical protein TERM 1666 2056296 - 2056334 + G 100 -11.6 -4.72986 | GGTTACCGGCTTCCT GGAGAGGGCAAGGCCATG CAG CAAGCCCTTGGCCTCGCC TTTTTGGTAGAGATC AFE_2304 2056188 - 2056967 + | TonB family protein TERM 1667 2057183 - 2057169 - g 74 -11.4 -3.4252 | CCGGAGGGACGAGAA GAGGCG CGC CGCCTC ACCAAGATCGTCACT AFE_2305 2057004 - 2057399 + | hypothetical protein TERM 1668 2057409 - 2057422 + T 78 -2.4 -5.28826 | ATGTGACAGTTGTGC GTCA ATGAGG TGAC TTTTTTGTGACATTT AFE_2306 2058177 - 2057410 - | DNA-binding response regulator AFE_2307 2058494 - 2058288 - | hypothetical protein AFE_2308 2058779 - 2058883 + | hypothetical protein AFE_2309 2060227 - 2058953 - | hypothetical protein TERM 1669 2060543 - 2060526 - g 76 -5.5 -4.59773 | overlap 2060528 GCGGATGCTGAAAAA GACTTGC AGCA GCAAGGC ACGAAGGAGATGCCC AFE_2311 2060307 - 2060588 + | hypothetical protein AFE_2312 2062327 - 2060969 - | sugar transporter family protein TERM 1670 2060995 - 2061005 + g 78 -6.8 -4.59342 | CCTCGATCTGCTCCA GGGT CTT ACCC TTTGTTTCTGGTACA TERM 1671 2061878 - 2061868 - G 85 -5.4 -5.02502 | CATAGGATAGAAAAA TACC CAC GGTA ATATAAAATTGATTG TERM 1672 2062239 - 2062218 - G 70 -13.1 -2.87621 | overlap 2062215 2062213 AACAAGAGAACACCA GCTACGACA CCTG TGTCGTAGC CAAATAGCAATCCAC AFE_2313 2062989 - 2062633 - | hypothetical protein sixA 2063482 - 2063000 - | phosphohistidine phosphatase SixA TERM 1673 2063571 - 2063546 - R 100 -15.5 -5.42198 | CGCTAAAAAAGAAAA GGCGTTCGTGA ACTT CCACGAACGCC TACCAACTTAAATAA TERM 1674 2063722 - 2063697 - R 76 -10.4 -3.64371 | overlap 2063720 AAGCCATATTGTAAA GCGTCTGGCC GCCCCA GGCAAGACGC ATCGGACTCACCCGG AFE_2316 2064302 - 2063766 - | outer membrane lipoprotein Slp, putative AFE_2317 2064409 - 2064299 - | hypothetical protein AFE_2318 2065690 - 2064419 - | sensor histidine kinase TERM 1675 2064859 - 2064843 - G 74 -6.5 -4.37502 | ACCATCAGATCAAAA TCCGCGA CCT TCGCCGA CATACCGCGCCCCAA TERM 1676 2064928 - 2064950 + g 72 -11.2 -3.28712 | opp_overlap 2064927, overlap 2064930 2064931 TATCCTGCAGCATAC CTTCCCGCAG GTG CTGCGGGGTG TTGTCCGGCAGCAAC TERM 1677 2064930 - 2064948 + g 74 -12.4 -3.21276 | opp_overlap 2064927, overlap 2064928 2064931 TCCTGCAGCATACCT TCCCGCAG GTG CTGCGGGG TGTTGTCCGGCAGCA TERM 1678 2064931 - 2064947 + g 72 -13.7 -2.52623 | opp_overlap 2064927, overlap 2064930 2064928 CCTGCAGCATACCTT CCCGCAG GTG CTGCGGG GTGTTGTCCGGCAGC AFE_2319 2066391 - 2065711 - | DNA-binding response regulator TERM 1679 2066630 - 2066648 + H 100 -14.6 -5.5112 | opp_overlap 2066632 GTTTTGCGGCTATTA GACGGACC TTT GGTCCGTC TTTTTTATTCCTGGA TERM 1680 2066818 - 2066843 + H 71 -9.7 -3.53298 | gap 1, overlap 2066813 CCGACAGGATTTAGC GCACTGACGACC AAG GGCCG-CAGTGC TTAGTTTGAAATGGT TERM 1681 2066886 - 2066904 + H 100 -14.6 -5.71712 | opp_overlap 2066888 GTTTTGCGGCTATTA GACGGACC TTT GGTCCGTC TTTTTTTATGTCCCG orn 2066964 - 2067548 + | oligoribonuclease Orn AFE_2321 2067695 - 2068783 + | monooxygenase, luciferase-like protein TERM 1682 2069194 - 2069204 + G 75 -8.2 -4.1899 | opp_overlap 2069181 AACCAACCTTGCCGG CCGG TAC CCGG TTTTGCCTACAGTGA TERM 1683 2069436 - 2069412 - g 77 -15 -2.77523 | opp_overlap 2069411 2069408, overlap 2069407 TCTCCATGAAGATGA CGCGGCCAGC GCAAT ACTGGCCGCG CTCCGTTATGGGCAG AFE_2322 2068789 - 2069745 + | hypothetical protein AFE_2323 2069767 - 2070657 + | hypothetical protein AFE_2324 2070717 - 2072348 + | phosphoglucomutase, putative AFE_2325 2072364 - 2072726 + | hypothetical protein TERM 1684 2074609 - 2074621 + G 70 -3.3 -4.63218 | opp_overlap 2074603, overlap 2074603 2074610 CCCTCAAAGCACGTC ACCAC GTC GTGGG TTTTCTTGGCGACGG TERM 1685 2075084 - 2075117 + G 78 -13.9 -3.16881 | gap 1, overlap 2075088 CATGTTGCACGTTTT CCATGCCGGTGAGGAG ATG TTCCACACCGGC-TGG TTCATCGAATCCATC TERM 1686 2075088 - 2075114 + G 77 -14.4 -2.78547 | overlap 2075084 TTGCACGTTTTCCAT GCCGGTGAGGAG ATG TTCCACACCGGC TGGTTCATCGAATCC AFE_2327 2072856 - 2075399 + | magnesium-translocating P-type ATPase TERM 1687 2075451 - 2075466 + F 78 -6.8 -4.62069 | GAAATTGCTCATTTG GAGCCG ATCT CGGTTC TTTTTGCCCTGGGCC AFE_2328 2075657 - 2076247 + | cytochrome b561 family protein TERM 1688 2076321 - 2076302 - f 100 -16.4 -4.15222 | ACCCCCTGGAACAAA CCCGGCGC CAAT GCGCCGGG AGGACCGTGGCCAAT AFE_2329 2076516 - 2076887 + | hypothetical protein AFE_2330 2076987 - 2077781 + | hypothetical protein AFE_2331 2077902 - 2078003 + | hypothetical protein AFE_2332 2080306 - 2079380 - | transcriptional regulator, LysR family AFE_2333 2078182 - 2079498 + | major facilitator family transporter AFE_2334 2080641 - 2080435 - | hypothetical protein TERM 1689 2080868 - 2080855 - R 74 -2.4 -5.04385 | opp_overlap 2080864 CATACCGCTAAAAAA CATC CGTCAC GATG GAATCGTCACTTCAC rpoD 2082735 - 2080861 - | RNA polymerase sigma factor RpoD TERM 1690 2082812 - 2082801 - R 72 -2.2 -4.85129 | ATTATATAGGAAAAA CCAC ACGC ATGG AAAGGTGCCCCGTCA dnaG 2084609 - 2082858 - | DNA primase TERM 1691 2084047 - 2084035 - G 76 -9.1 -4.07687 | opp_overlap 2084035, overlap 2084022 2084018 ACTCGCCCGCGAAAA CGGTC GTA GACCG ATCCGTCTTCACGGC TERM 1692 2084499 - 2084516 + g 85 -2.5 -5.4505 | opp_overlap 2084490 2084491 ATGAAAGGGGCAGCA GGCCCAG AAAT CCCGGCC TTTTTTCTTCAGCGG AFE_2338 2086937 - 2084613 - | MutS2 family protein TERM 1693 2086752 - 2086735 - G 75 -2.5 -4.90079 | overlap 2086736 ACGGGAAGAAGAAAA CCGGCGG AAAA CCGCTGC GACAACCAGGCCAAC AFE_2339 2087395 - 2086949 - | GatB/Yqey domain protein rpsU 2087610 - 2087395 - | ribosomal protein S21 AFE_2342 2087899 - 2088756 + | RNA polymerase sigm-70 factor family rdgB 2089346 - 2088723 - | non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family rph 2090071 - 2089343 - | ribonuclease PH TERM 1694 2090353 - 2090373 + G 74 -11.1 -3.49568 | overlap 2090352 AGGTGATTGCCGAAT GGGGCTCTC TGG GAGAGGCCC TGTTCTTCTGCGTCA TERM 1695 2090570 - 2090524 - g 71 -7.9 -4.12902 | gap 1, overlap 2090529 2090534 GAATCATTGCCAAAA GCGAAGATACCCAGGTGCTGGT CCTG ACCCGCGCCCGG-TATCAGCGC CTGAAGGTGGAAAAA AFE_2344 2090211 - 2090705 + | cyclic nucleotide-binding domain protein AFE_2345 2091289 - 2090732 - | ATP-dependent protease La domain protein TERM 1696 2091493 - 2091506 + G 75 -2.4 -4.87665 | overlap 2091475 2091464 GCGCATCTGGGGACG CAGT GTGCGG ACTG TTTTTATCGGTGGCG AFE_2346 2091314 - 2092471 + | oxygen-independent coproporphyrinogen III oxidase, putative AFE_2347 2092797 - 2092486 - | hypothetical protein AFE_2348 2092821 - 2093615 + | RNA pseudouridine synthase family protein TERM 1697 2093915 - 2093932 + F 100 -10.5 -5.24129 | TCTGACCTCTGACCG GCCGGCC TACG GGTCGGC TTTTTTATGACGACC TERM 1698 2095289 - 2095279 - g 73 -4.6 -4.58663 | ACGACCCTCGAAAAA GCCC AAC AGGC GGAGGGCTCGGGCAT AFE_2349 2093965 - 2095650 + | multidrug resistance protein AFE_2350 2096631 - 2095660 - | D-alanyl-D-alanine carboxypeptidase, putative TERM 1699 2096145 - 2096131 - G 71 -7.1 -4.1552 | overlap 2096135 CATCTCGGCAACAAA GGCAG GTACG CTGCC AGCTACCAGATGCGC TERM 1700 2096849 - 2096867 + G 76 -7.4 -4.52589 | overlap 2096842 CTGGGCCATCGCGGG GGTGATCA TTC TGGTCGCC TTTTATGTCCGCGCA AFE_2351 2096781 - 2097542 + | hypothetical protein AFE_2352 2097558 - 2098565 + | hypothetical protein TERM 1701 2098750 - 2098720 - T 100 -10.5 -4.93877 | opp_overlap 2098723, overlap 2098723 CTCCACCAAATAAAA CAATGGCCTAGGT GATAA ACCCAGGCCATTT TTCTTGCTAAACCAC TERM 1702 2098747 - 2098723 - T 100 -12.2 -4.56436 | opp_overlap 2098723, overlap 2098720 CACCAAATAAAACAA TGGCCTAGGT GATAA ACCCAGGCCA TTTTTCTTGCTAAAC TERM 1703 2098723 - 2098747 + T 100 -10 -5.1356 | opp_overlap 2098720 2098723 CACCAAATAAAACAA TGGCCTAGGT GATAA ACCCAGGCCA TTTTTCTTGCTAAAC purL 2102765 - 2098914 - | phosphoribosylformylglycinamidine synthase TERM 1704 2099522 - 2099508 - G 79 -9.2 -4.25283 | ATCTCCGTAGGAAAA GCCGCC GCA AGCGGC CATTGCCTGGAAATC TERM 1705 2100037 - 2100017 - G 74 -5.3 -4.56597 | overlap 2100021 GTTCCTCGGCAAAAA GGAAGGACC AGC GATCCGCCC TCGAAGGCAGTTGAA TERM 1706 2101297 - 2101280 - G 71 -5.5 -4.431 | CATGGATGGATAAAA TGGGGGA ATCC TCTCCCA GGGCAATACAGCGCT purC 2103558 - 2102836 - | phosphoribosylaminoimidazole-succinocarboxamide synthase purB 2104862 - 2103555 - | adenylosuccinate lyase AFE_2357 2105992 - 2104859 - | lipoprotein, putative TERM 1707 2105688 - 2105703 + g 90 -6 -5.21709 | CCCAGAATCTGCGCC CCCACG CCAG CGAGGG TTTTTTCCTCTACCG dapA 2106905 - 2106030 - | dihydrodipicolinate synthase AFE_2360 2107831 - 2107178 - | channel protein, hemolysin III family TERM 1708 2107252 - 2107237 - G 77 -3.2 -4.91109 | overlap 2107251 CCGCGATGACAAAAA CATGCC AGAT GGAATG GAAATATTTCCAGCG TERM 1709 2107755 - 2107732 - G 93 -8 -4.95155 | opp_overlap 2107751, overlap 2107735 TCCACAGCACAAAAA CCAGCGCGGC ACCG ACCGCGCCTG CGCCATGCAGCAGAC AFE_2361 2109234 - 2107906 - | N-acetylmuramoyl-L-alanine amidase, putative TERM 1710 2109104 - 2109146 + g 76 -13.2 -3.01712 | opp_overlap 2109084 2109087 CGCACACCCTGCCCG TGGCGGCCCACCCGCAGCCC ACG GAGCTGCGCGGCGGCGGCCA TATTCCAGCCGCACA AFE_2362 2109754 - 2109320 - | thioredoxin grxC 2110069 - 2109785 - | glutaredoxin 3 AFE_2364 2110494 - 2110069 - | rhodanese-like domain protein AFE_2365 2110719 - 2110498 - | hypothetical protein TERM 1711 2110650 - 2110638 - G 71 -6.9 -4.25283 | ATTCGCTCACGAAAA CCGGA CTG CCCGG AGCACCCAGCGCCAC AFE_2366 2114004 - 2110726 - | transporter, AcrB/AcrD/AcrF family TERM 1712 2112439 - 2112456 + g 70 -10.5 -3.53012 | ACCTTTCTCACCACC GCCGGCC TGCC GGTCGGC TTTGCCCCGCAGAAA TERM 1713 2113976 - 2113954 - G 71 -5.4 -4.42386 | overlap 2113955 CTTGGACTGATAAAA CGACTGAGCG AGC CGCCCTGCCA GATTTTGCCGCTGCT AFE_2367 2115079 - 2113997 - | efflux transporter, RND family, MFP subunit AFE_2368 2116497 - 2115076 - | outer membrane efflux protein AFE_2369 2117047 - 2116745 - | transcriptional regulator, ArsR family TERM 1714 2117117 - 2117103 - R 74 -4.2 -4.8269 | TATAATTACCAAAAA CCGC GGTGCTT GCGG TCACCTTGCCTTTTG TERM 1715 2117246 - 2117270 + r 95 -6.4 -5.28942 | TCCACTACAAATCAA GGGTTTAGGC TAACT GCTTAGGCCC TTTTTCTTTGCCGTG AFE_2371 2117701 - 2117462 - | hypothetical protein AFE_2372 2119382 - 2117769 - | type I restriction-modification system, M subunit AFE_2373 2119582 - 2119379 - | hypothetical protein AFE_2374 2120757 - 2119579 - | anticodon nuclease, putative TERM 1716 2119903 - 2119915 + gH 83 -7.7 -4.57209 | overlap 2119907 GAAGTGATGTGTATA GAGTG CAC CACTC TTTTGTGCTTCATCT TERM 1717 2120350 - 2120365 + gH 72 -2.6 -4.74706 | gap 1, overlap 2120352 GAGTTTTTTAGAGCC TG-GAAC ATA GTTCTCA TTTTTGACTCTTCGC TERM 1718 2120697 - 2120722 + gH 74 -10.3 -3.55444 | CTTTCTTGTTCTCCA GCTCGCCGCGC AAAT GGGCGGCCAGC TTTGGCAAGTCGGCG AFE_2376 2120710 - 2120871 + | hypothetical protein AFE_2375 2124013 - 2120849 - | ATP-dependent helicase, DEAD/DEAH box family AFE_2377 2124798 - 2124010 - | hypothetical protein AFE_2378 2125946 - 2124795 - | type I restriction-modification system, S subunit TERM 1719 2125827 - 2125837 + g 74 -5.4 -4.55295 | overlap 2125818 GCTCTCGAGATTGCC TTGC GTG GCAA TTTCTTTGTCGAAGA AFE_2379 2126024 - 2126221 + | hypothetical protein AFE_2380 2127030 - 2126416 - | hypothetical protein AFE_2381 2130121 - 2127023 - | type I restriction-modification system, R subunit TERM 1720 2127574 - 2127587 + g 73 -4.5 -4.61231 | gap 1 TGTCCGGCTTGTTGC GC-CCG TCG CGGAGC TTTTTGGCGGTGTCC TERM 1721 2128033 - 2128019 - G 72 -11.4 -3.28712 | GTTGGTGCGCGAGAA GGCCTG GAT CAGGCC GTGGTGCTTGAGGTT TERM 1722 2128336 - 2128346 + g 75 -2.4 -4.98531 | GGTCTTCGGAGAGCT GGTC GAT GTCC TTTTTGCTTTCGGGA TERM 1723 2128921 - 2128931 + g 78 -4.6 -4.77157 | GCTGCTCCTTGTAGG TGGC CTG GCCG TTTTTGCTGCGTTGC AFE_2382 2130200 - 2130337 + | hypothetical protein ubiD 2131886 - 2130414 - | 3-octaprenyl-4-hydroxybenzoate carboxy-lyase AFE_2384 2132783 - 2131911 - | hypothetical protein AFE_2385 2133239 - 2132796 - | SCP-2 sterol transfer family protein AFE_2386 2134045 - 2133299 - | HesA/MoeB/ThiF family protein TERM 1724 2133634 - 2133622 - G 78 -2.6 -5.02074 | overlap 2133630 2133631 CCATGCTGGAAAAAA CCGG TAAAC CCAG AGTCTGCGCCGTCTG AFE_2387 2134815 - 2134045 - | hydrolase, TatD family ubiH-2 2134993 - 2136222 + | 2-octaprenyl-6-methoxyphenol hydroxylase ubiH-1 2136212 - 2137399 + | 2-octaprenyl-6-methoxyphenol hydroxylase AFE_2390 2137411 - 2137674 + | hypothetical protein TERM 1725 2139113 - 2139123 + G 80 -3.2 -5.055 | AAATCCTTCTCATTC CATC TCT GGTG TTTTTTACGCGTTGC AFE_2392 2138641 - 2140485 + | hypothetical protein AFE_2393 2140693 - 2141148 + | ISAfe5, transposase orfA AFE_2394 2141283 - 2141633 + | ISAfe5, transposase orfB AFE_2396 2143934 - 2143755 - | hypothetical protein TERM 1726 2143785 - 2143807 + g 85 -3.4 -5.4505 | overlap 2143786 GCGGTTTTTTTCCAG TTCCACGG CAAGAGT TCGTGGAG TTTTTTGTTGGGCCA TERM 1727 2143976 - 2144029 + H 89 -13.3 -3.65425 | overlap 2143987 CCCAGAAGCACTCCT GCTTCCCATTCTGGTATTTATGTGG CCGA CCACATAAATACCATTATGTGGCGC TTTAAAATATGTGGC TERM 1728 2143987 - 2144018 + H 100 -17.6 -3.51161 | overlap 2143976 TCCTGCTTCCCATTC TGGTATTTATGTGG CCGA CCACATAAATACCA TTATGTGGCGCTTTA TERM 1729 2144728 - 2144741 + G 88 -2.3 -5.48054 | TGGGCTCATTGGCCA GCTCC TTAC GCAGC TTTTTTGCTTTTGCT AFE_2397 2144157 - 2145401 + | site-specific recombinase, phage integrase family AFE_2398 2145398 - 2146339 + | site-specific recombinase, phage integrase family AFE_2399 2146332 - 2147330 + | site-specific recombinase, phage integrase family AFE_2400 2148265 - 2147405 - | hypothetical protein AFE_2401 2148947 - 2148399 - | hypothetical protein AFE_2402 2148975 - 2149082 + | hypothetical protein TERM 1730 2150589 - 2150565 - f 77 -8.5 -4.0896 | overlap 2150555 2150554 AAATCGGCCGCAAAA GGCCATTCCTG CGA CAGTAAAGGCC ATGGTCGTGGACACC AFE_2405 2150798 - 2151298 + | hypothetical protein AFE_2404 2151965 - 2151591 - | transposase, degenerate TERM 1731 2151623 - 2151633 + g 78 -2.4 -5.15969 | overlap 2151612 2151610 TCCTGTTCTGGCCGG GCCG TAA CTGC TTTTTTAGGTTCAAC AFE_2406 2152379 - 2152275 - | hypothetical protein AFE_2407 2152967 - 2154262 + | hypothetical protein TERM 1732 2155063 - 2155048 - g 74 -3.2 -4.82901 | gap 1, overlap 2155049 GCCGCTGCAGAAAAA GCCGCGC GAG ACG-GGC TGTAGCGTATTCGTC TERM 1733 2156109 - 2156125 + G 93 -6.5 -5.26875 | GTGCCCCACATGATC TCGCGGT GAT ACCACGA TTTTTTCATTCGCGC TERM 1734 2156412 - 2156362 - g 76 -5.3 -4.59773 | gap 1, opp_overlap 2156362 TCGGATGCCCAAAAA GGAGCGTGCTTTGGTCATCGCG GAGCTTGG CGCGCTG-CCACCGCATGCCCC TCGTGTACTGCTCGC AFE_2408 2154272 - 2156701 + | DEAD/DEAH box helicase, putative AFE_2409 2157097 - 2156858 - | hypothetical protein TERM 1735 2157128 - 2157108 - R 85 -6.9 -4.86001 | ACCATCCCATAAAAA TCAGGAC CGGAATC GTCCTGA TACGTGGTCTTAAGA AFE_2410 2157735 - 2157238 - | acetyltransferase, GNAT family AFE_2411 2158433 - 2157957 - | NADH-quinone oxidoreductase, B subunit AFE_2412 2160636 - 2158510 - | phosphoenolpyruvate-utilizing enzyme mobile domain protein TERM 1736 2160366 - 2160422 + g 100 -10.8 -5.30575 | gap 1 TTAACACAAAAGCTG CGGCTTCGTCGG-AACCTGTGGCACGG GTTT CCGTGCCACCCGTTGCCAACGGGACTG TTTTTTGGCTTTTTC AFE_2413 2161438 - 2160776 - | transposase, degenerate TERM 1737 2161774 - 2161797 + G 83 -3 -5.1675 | overlap 2161755 CGCGATCATCGCGTG GACTTTGCCG ATGC CGTCGGGGTC TTTTTTGATGACTGC AFE_2414 2161717 - 2161998 + | hypothetical protein AFE_2415 2161995 - 2162237 + | hypothetical protein TERM 1738 2163231 - 2163264 + G 85 -16.1 -3.1479 | gap 1, opp_overlap 2163250 GCTCAACTTCGGTCG CTGGGCGCTGCGCG ATAAAGC CGCGCAGCGC-CAG TTAGCTCTACGTTAT AFE_2416 2163160 - 2163294 + | hypothetical protein AFE_2417 2163294 - 2164091 + | hypothetical protein TERM 1739 2164173 - 2164123 - f 100 -17.2 -3.59109 | opp_overlap 2164125, overlap 2164124 2164127 CCACAGATCAGATAA GCCATGTTTTGGTCCCTTCAAA CCCCTTT TTTGAAGGGACCAAAACATGTT AATCTGACATAATCA TERM 1740 2164172 - 2164124 - f 100 -20.7 -2.74983 | opp_overlap 2164125, overlap 2164123 2164127 CACAGATCAGATAAG CCATGTTTTGGTCCCTTCAAA CCCCTTT TTTGAAGGGACCAAAACATGT TAATCTGACATAATC TERM 1741 2164125 - 2164171 + F 100 -24.2 -3.272 | opp_overlap 2164124 2164123 2164127 ACAGATCAGATAAGC CATGTTTTGGTCCCTTCAAA CCCCTTT TTTGAAGGGACCAAAACATG TTAATCTGACATAAT TERM 1742 2164169 - 2164127 - f 100 -21 -2.64318 | opp_overlap 2164125, overlap 2164124 2164123 AGATCAGATAAGCCA TGTTTTGGTCCCTTCAAA CCCCTTT TTTGAAGGGACCAAAACA TGTTAATCTGACATA AFE_2418 2164442 - 2164576 + | hypothetical protein AFE_2419 2166238 - 2164763 - | plasmid recombination enzyme, putative TERM 1743 2165268 - 2165278 + g 100 -8.2 -5.31877 | overlap 2165235 GCATCCCGCACCTGT GCCG TGA CGGC TTTTTTCTGCTGGCT TERM 1744 2166285 - 2166275 - R 77 -8.2 -4.07568 | opp_overlap 2166275 GTGGGGGTTTCAAAA GGGG CCG CCCC TTTGCCTACTGCTTA AFE_2420 2167471 - 2166470 - | cation diffusion facilitator family transporter TERM 1745 2166912 - 2166892 - G 70 -3.9 -4.58663 | overlap 2166893 ACCAGTGCGTAAAAA GCATCACGA TTC CCGCGATGA CCACGCCAAGCGAGA AFE_2421 2167571 - 2168047 + | Cd(II)/Pb(II)-responsive transcriptional regulator AFE_2422 2168644 - 2168060 - | hypothetical protein AFE_2423 2169218 - 2168727 - | ATP synthase F1, epsilon subunit, putative AFE_2424 2169969 - 2169343 - | cation efflux permease, putative AFE_2425 2170031 - 2170357 + | hypothetical protein AFE_2426 2170607 - 2170506 - | hypothetical protein AFE_2427 2170827 - 2170663 - | hypothetical protein AFE_2428 2171292 - 2170930 - | heavy metal efflux system protein, putative AFE_2429 2172176 - 2171421 - | [Ni/Fe] hydrogenase, b-type cytochrome subunit, putative TERM 1746 2171707 - 2171680 - G 76 -6.3 -4.59944 | AGCAGCAGAAAGAAA CCCCATTCATG CATCAC CATCAACGGGG AGTGCATCGCTTCGC AFE_2430 2172921 - 2172235 - | hypothetical protein AFE_2431 2176105 - 2172992 - | heavy metal efflux pump, CzcA family TERM 1747 2173097 - 2173075 - G 80 -14.8 -3.01791 | opp_overlap 2173067 ACGCGGCGCTGAACA TGCCGCCCAC CAT GGGGGCGGCA ATACGCTTCATCACA TERM 1748 2174212 - 2174234 + g 89 -9.8 -4.66833 | GCTTGTGCATGGTCA TCCCGGCTGG CCA CTGGTCGGGA TTTTTCAAATTCACC AFE_2432 2176350 - 2177576 + | ISAfe3, transposase AFE_2433 2179099 - 2177651 - | efflux transporter, RND family, MFP subunit TERM 1749 2178164 - 2178182 + g 81 -8 -4.62069 | ATTGGGAAAGCTCAG CCGGGCCG TCA CCGTCCGG TTTTTGGGGTCGAGG AFE_2434 2180397 - 2179096 - | outer membrane efflux protein TERM 1750 2180154 - 2180203 + g 71 -6.6 -4.18018 | CGAGGGCGAGGTGCG GATCGGGGAGTTG-GGCTACCG CCACCGCT TGGT-GCCGCAATTCCGCGATC TTTTGGGTCAGGGCG AFE_2435 2180849 - 2180499 - | hypothetical protein AFE_2436 2181112 - 2180921 - | hypothetical protein AFE_2437 2181098 - 2181352 + | cyclopropane-fatty-acyl-phospholipid synthase domain protein AFE_2438 2181531 - 2181815 + | hypothetical protein AFE_2439 2181955 - 2183979 + | copper-translocating P-type ATPase AFE_2441 2184572 - 2184471 - | hypothetical protein AFE_2442 2184894 - 2184586 - | hypothetical protein AFE_2443 2185523 - 2185209 - | transposase, degenerate AFE_2444 2185425 - 2185814 + | hypothetical protein AFE_2445 2185790 - 2186071 + | hypothetical protein TERM 1751 2186128 - 2186145 + F 77 -4.1 -5.0133 | AGGACCTCGTCCACC CTGCAAT TTGC GTTGCGG TTTTTTGCGAACCTG AFE_2447 2187708 - 2188103 + | hypothetical protein AFE_2448 2188165 - 2188371 + | heavy metal-binding protein, putative AFE_2449 2188376 - 2188615 + | hypothetical protein TERM 1752 2188672 - 2188690 + F 83 -7.4 -4.56978 | CAGGCGTTTGGGTCT TGCCGC AGCGTGC GCGGCA TTTATTGTTTCGCCC AFE_2450 2188760 - 2189062 + | cytochrome c family protein AFE_2452 2189108 - 2189254 + | hypothetical protein AFE_2451 2189424 - 2189251 - | hypothetical protein TERM 1753 2189717 - 2189697 - R 72 -11.8 -2.73159 | overlap 2189696 GGAACTGGGGCAAAT CCAGGGGC TTGCG GCCCCCGG CGACGATCACCGCAT AFE_2454 2191985 - 2190384 - | Na+/H+ antiporter AFE_2455 2192372 - 2192106 - | hypothetical protein TERM 1754 2192693 - 2192677 - R 91 -12.3 -4.15565 | GCCATCACGCTAAAA CCCCCTT TTC AAGGGGG GGGGGGTAAAGCGGC AFE_2456 2192824 - 2192726 - | hypothetical protein AFE_2457 2194750 - 2193131 - | amino acid permease family protein TERM 1755 2193527 - 2193498 - G 76 -5.5 -4.61566 | TTTGAAACCACAAAA GCGAGGGGAGCCA GTGC CGGCGCCCACCAC AGCCGAAATGGTCGG AFE_2458 2195188 - 2194775 - | hypothetical protein TERM 1756 2195059 - 2195086 + gH 75 -6.2 -4.56597 | gap 1 AACGGACCTGCTGTG CCAGCCACTCGTC GGT GA-GCGTGGCCGG TTTTTGAGAGAAAAA TERM 1757 2195284 - 2195266 - gR 74 -7.3 -4.14472 | overlap 2195258 2195268 GCAACATGGCTAAAA GAGCCGG TCAGC CCGGCGC ACCAAAATACGGCGC AFE_2459 2195619 - 2195260 - | hypothetical protein AFE_2460 2195178 - 2195324 + | hypothetical protein TERM 1758 2195656 - 2195642 - TR 100 -4.2 -5.75342 | overlap 2195643 2195644 TCCTCTTAAAAAAAA GGTGGT GAA AGCACC AGGAAGGCATGTTGT AFE_2461 2195977 - 2195678 - | hypothetical protein glnB-1 2196345 - 2195974 - | nitrogen regulatory protein P-II 1 AFE_2463 2197593 - 2196403 - | hypothetical protein proB-1 2198641 - 2197673 - | glutamate 5-kinase TERM 1759 2197932 - 2197954 + g 76 -9.8 -3.7331 | opp_overlap 2197931, overlap 2197931 2197930 GTGGTCGCACCAGAG CGCGCCGC ATGGGTG GCGGCGTG TATTTTGGTGAGCAT AFE_2465 2198888 - 2198706 - | hypothetical protein AFE_2466 2200381 - 2198825 - | hypothetical protein AFE_2467 2200744 - 2200415 - | acetyltransferase, GNAT family AFE_2468 2200795 - 2201127 + | ISAfe4, tranposase orf1 AFE_2469 2201118 - 2201465 + | ISAfe4, transposase orf2 AFE_2470 2201515 - 2203152 + | ISAfe4, transposase orf3 AFE_2471 2204243 - 2203665 - | DNA-binding protein HU family protein TERM 1760 2204225 - 2204205 - G 88 -6.9 -5.00616 | TGTCCTTTCAAAAAA CCAGCAAAA CAC TTTTCCTGG CAGACAGACTCGGCA AFE_2472 2204776 - 2204258 - | hypothetical protein TERM 1761 2204535 - 2204553 + gr 76 -6.7 -4.50976 | gap 1, opp_overlap 2204506 2204534 GAGTAGAGAGAAACG CCCT-CCG CCAA CGGTAGGG TTTTGTGGTGTCGCA kdpC-1 2205356 - 2204733 - | K+-transporting ATPase, C subunit TERM 1762 2205101 - 2205120 + gr 71 -10.6 -3.28791 | overlap 2205102 TCGGACCCAGATTGG AGGCGCCG GACC CGGCGCCA TTGTAAGGCACCGGT TERM 1763 2205102 - 2205119 + gr 81 -14.1 -2.57132 | overlap 2205101 CGGACCCAGATTGGA GGCGCCG GACC CGGCGCC ATTGTAAGGCACCGG kdpB-1 2207438 - 2205369 - | K+-transporting ATPase, B subunit kdpA-2 2209203 - 2207452 - | K+-transporting ATPase, A subunit TERM 1764 2207590 - 2207611 + g 77 -7.9 -4.40561 | overlap 2207587 2207598 CGTATGCGTCGTCAG GGTACCCGC CCCG GCGGGGATC TTCTTTTTACCCGCA TERM 1765 2207886 - 2207900 + g 74 -7.1 -4.34402 | ATGGCATGATGAGGA TGGCC AGTGA GGCCA TTTTGATCTCGAACG TERM 1766 2207909 - 2207921 + g 85 -3.4 -5.40072 | opp_overlap 2207917 GAGGCCATTTTGATC TCGA ACGAC TCGA TTTTTTTACCGAGAA TERM 1767 2208704 - 2208716 + g 71 -5.5 -4.36914 | TCGACCCAGAAATTT CCGAG ATT CTTGG TTTTATGACGGGCGA kdpF-1 2209292 - 2209200 - | K+-transporting ATPase, F subunit kdpA-1 2211340 - 2209589 - | K+-transporting ATPase, A subunit TERM 1768 2210023 - 2210037 + g 74 -7.1 -4.34402 | ATGGCATGATGAGGA TGGCC AGTGA GGCCA TTTTAATCTCAAAGG TERM 1769 2210454 - 2210440 - G 88 -6.4 -4.87786 | opp_overlap 2210440 CCAAGGGCACAAAAA TCACCA ACA TGGCGA TTAATAGCGCCCAAG TERM 1770 2211307 - 2211295 - G 84 -5.5 -4.87786 | GCAATGCCAGAAAAA CTGAC AAT GCCAG AACTGCAACAAGGAG AFE_2478 2211784 - 2211614 - | hypothetical protein merC 2212065 - 2212499 + | mercuric resistance protein MerC merA 2212525 - 2214168 + | mercuric reductase TERM 1771 2214270 - 2214302 + G 76 -13.5 -3.06831 | opp_overlap 2214284 2214287 CTGCCCAGCACTTGG GCCAGTGCCCACA AGCAGGC TGTGGGCACTGCC TTGAGTGAACGTTCC TERM 1772 2214329 - 2214345 + G 72 -12.3 -3.0264 | overlap 2214317 2214331 TTCCCGCGTCTGGTT CACCGTC GCC GACGGTG TGTTAACCGAGGTTT cga 2214225 - 2216270 + | glucan 1,4-alpha-glucosidase TERM 1773 2217214 - 2217230 + G 72 -10.9 -3.31726 | overlap 2217212 ATTGCATTACTGTTT TTCGGGA AGA TCCCGAA TATTATCTGAAGCGC AFE_2484 2216995 - 2217240 + | hypothetical protein AFE_2485 2217265 - 2217444 + | transposase, degenerate AFE_2486 2218063 - 2217632 - | hypothetical protein AFE_2487 2218391 - 2218065 - | hypothetical protein TERM 1774 2218340 - 2218362 + g 80 -4.1 -5.09204 | TACTCACGGAGATCG GCGGGTG CAACTGCAT CACCTGC TTTTTATTGGCATGT AFE_2488 2218672 - 2218391 - | hypothetical protein TERM 1775 2218651 - 2218624 - G 100 -11.2 -5.00884 | overlap 2218641 ATCGCCTGTAAAAAA CCAGGTGAGCGC ATGA ACGCCCTCCTGG CAACGTGGAGCGGGC TERM 1776 2218808 - 2218834 + H 70 -9.3 -3.74693 | opp_overlap 2218807, overlap 2218812 2218831 ATTCAATCTACAGAT CGGCCGCCCCG CAGCC TGGGGCGTTCG TTTGGTGCCATCGGC TERM 1777 2218812 - 2218830 + H 71 -9.5 -3.56972 | opp_overlap 2218807, overlap 2218808 AATCTACAGATCGGC CGCCCCG CAGCC TGGGGCG TTCGTTTGGTGCCAT AFE_2489 2218923 - 2219186 + | hypothetical protein AFE_2490 2219238 - 2219465 + | hypothetical protein AFE_2491 2220122 - 2220814 + | lipoprotein, putative AFE_2492 2221537 - 2221235 - | hypothetical protein AFE_2493 2221739 - 2221530 - | hypothetical protein TERM 1778 2221697 - 2221713 + g 73 -4.3 -4.64657 | TCCCGCCTGCCGCCA CGGCCTG GAC CAGCCTG TTTTTAGGAATTTCA AFE_2494 2222160 - 2221801 - | hypothetical protein TERM 1779 2222201 - 2222228 + r 78 -12 -3.20382 | gap 1, overlap 2222202 AGGATTCGATCTTGC CGGGCGCAACCCT TGC AGGGT-GCGCCCC TTGCTAGATGTGCCC TERM 1780 2222202 - 2222227 + r 85 -15.5 -2.52015 | gap 1, overlap 2222201 GGATTCGATCTTGCC GGGCGCAACCCT TGC AGGGT-GCGCCC CTTGCTAGATGTGCC AFE_2495 2222498 - 2222232 - | hypothetical protein AFE_2496 2222583 - 2222993 + | hypothetical protein AFE_2497 2222990 - 2223304 + | hypothetical protein AFE_2498 2224002 - 2223385 - | hypothetical protein TERM 1781 2223563 - 2223536 - G 70 -4 -4.59773 | opp_overlap 2223526 CGCCATCGGTAAAAA GGCCGATTCCTG TACA CGGGAACCACCC GCGCGCGCCAGATCC AFE_2499 2224205 - 2224050 - | lipoprotein, putative AFE_2500 2224408 - 2224256 - | hypothetical protein AFE_2501 2224447 - 2224860 + | hypothetical protein AFE_2502 2227266 - 2225821 - | hypothetical protein TERM 1782 2227182 - 2227196 + g 70 -4.9 -4.5448 | GACAATACTTATAGC CGTGG TAAAC CCGCG TTATTTTTCTGCCTC AFE_2503 2228294 - 2227266 - | hypothetical protein TERM 1783 2227703 - 2227681 - G 83 -2.7 -5.25803 | gap 1 AATGCGGACAAAAAA GACGCACCGG CAAA CCA-TGCATC GGTCTCCGTCGGGTG AFE_2504 2229241 - 2228357 - | transposon, transposition helper protein C, putative AFE_2505 2231121 - 2229241 - | transposon, transposition protein B, putative TERM 1784 2229381 - 2229391 + g 91 -8.2 -4.84363 | TGCGCTTTTGCTGTT GGCG ACG CGCC TTTTTCGTCCTTTCC TERM 1785 2229622 - 2229640 + g 70 -4.5 -4.57073 | ATCACGGGGATCACG GCGGAAA ATGAA TTGCCGC TTTTTACCGGGGGTG AFE_2506 2231803 - 2231114 - | transposon, transposase protein A, putative AFE_2508 2233106 - 2232729 - | hypothetical protein AFE_2509 2233830 - 2233348 - | transcriptional regulator, MerR family AFE_2510 2234001 - 2233876 - | hypothetical protein AFE_2511 2234077 - 2234232 + | hypothetical protein AFE_2512 2234553 - 2234434 - | hypothetical protein AFE_2513 2235168 - 2234644 - | hypothetical protein TERM 1786 2235024 - 2235014 - G 93 -8.2 -5.0916 | opp_overlap 2235013 2235014 GTGCCAAGATAAAAA GCCG CGT CGGC ATTCTGCGATACCGC prfC 2236815 - 2235196 - | peptide chain release factor 3 TERM 1787 2235923 - 2235902 - G 73 -4.3 -4.66938 | ATCTTGAATACAAAA CCGCTGAAG GCCT CTTCTTCGG GCATCACGGTCCGAC rimI 2237298 - 2236822 - | ribosomal-protein-alanine acetyltransferase TERM 1788 2237036 - 2237001 - G 78 -4.6 -4.84359 | gap 1, overlap 2237002 GCACTTCCAGAAAAA CCCTTTG-CGCACCCAG TTG CCCGGCGCGACAGAGGA GATGTTGCAGCATCC AFE_2516 2237968 - 2237300 - | hypothetical protein AFE_2517 2239893 - 2237968 - | ATP-dependent helicase, DEXD family AFE_2519 2239963 - 2240325 + | hypothetical protein TERM 1789 2240356 - 2240339 - T 100 -2.7 -5.9003 | overlap 2240341 AAACCAATAAAAAAA TGCTGAA CTGC TTCAGAA GGAGGGTTTCACGGC AFE_2518 2240429 - 2240322 - | hypothetical protein AFE_2520 2241635 - 2240538 - | NLP/P60 family protein TERM 1790 2240728 - 2240712 - GH 78 -2.1 -5.04385 | opp_overlap 2240714, overlap 2240714 2240717 CAGAGTGTCAAAAAA CACCAGG TCG CCCGGCT TTAGATCATCCCGGG TERM 1791 2240726 - 2240714 - GH 71 -6.9 -4.14633 | opp_overlap 2240714, overlap 2240712 2240717 GAGTGTCAAAAAACA CCAGG TCG CCCGG CTTTAGATCATCCCG TERM 1792 2241173 - 2241149 - GH 74 -11.3 -3.16564 | opp_overlap 2241155 CGGGCACCGGATCAA CCGGAGCGGCC ACC GGCCGTTTCGG AAGAACCACTGGCGC TERM 1793 2241155 - 2241167 + gH 74 -10.5 -3.53012 | opp_overlap 2241149 CCGGATCAACCGGAG CGGCC ACC GGCCG TTTCGGAAGAACCAC TERM 1794 2241317 - 2241295 - GH 71 -9 -3.71378 | GACTGCATAGGGAAA CCGTAGGTCG GAA CGGCCTGCGG CGCCGCACCGACTCC TERM 1795 2241600 - 2241623 + gH 100 -6.8 -5.86332 | gap 1 TAAAAGCGTCATTAC CGTCA-TGGCA ACC TGCCAGTGATG TTTTTTTTGCATTCG TERM 1796 2241657 - 2241711 + GH 78 -10.1 -3.89614 | gap 1, opp_overlap 2241655 GTCTCCCGAATCACC TGGGAATCGCCGCTGCGTAATCCGCC CGTT GGCCGATTATGCAGAGAC-ATTGCCA TTTCTCAAAATTAAG AFE_2521 2241618 - 2241725 + | hypothetical protein TERM 1797 2241782 - 2241767 - fH 100 -9 -5.56673 | ACCCACAATAAAAAA GCCGAA CAAG TTCGGC TCGATATGCATACTG AFE_2522 2242136 - 2243392 + | carbohydrate-selective porin, OprB family AFE_2523 2243425 - 2243712 + | feoA family protein TERM 1798 2243724 - 2243708 - f 78 -2.3 -5.26918 | ATACCGGAGAAAAAA CATGA GCGACTG TCATG GAACACCACAGCGTA TERM 1799 2244415 - 2244400 - g 76 -6.1 -4.65895 | CGGCCGACCCAAAAA CGCAG CATGCC CTGCG ACAGATCAGCAGCGA TERM 1800 2244591 - 2244603 + G 72 -2.6 -4.84359 | overlap 2244597 GTATTGAACGACTGG CTGG GCGTA CCGG TTTTTCTGGCGGTAC feoB 2243757 - 2246057 + | ferrous iron transport protein B AFE_2525 2246054 - 2246353 + | hypothetical protein AFE_2526 2246451 - 2247323 + | hydrolase, carbon-nitrogen family AFE_2528 2247316 - 2248068 + | glutamine amidotransferase, class I AFE_2527 2248712 - 2248065 - | membrane protein, DedA family AFE_2529 2249100 - 2248744 - | hypothetical protein AFE_2530 2249849 - 2249097 - | hypothetical protein AFE_2531 2250777 - 2249851 - | transcriptional regulator, LysR family AFE_2532 2250862 - 2251464 + | hypothetical protein AFE_2533 2252631 - 2251486 - | oxidoreductase, aldo/keto reductase family AFE_2534 2253794 - 2252628 - | histone deacetylase family protein TERM 1801 2252808 - 2252825 + g 72 -11.3 -3.31144 | CGCCTGGAGCAATGC TTGCCCG GATG CGGGCAA TTCTGCGGGTAACGA TERM 1802 2253768 - 2253758 - G 75 -8.2 -4.25104 | CCGCCCCGACGAAAA CCGC TGG GCGG GTCGCGGCGATCTGT AFE_2535 2256256 - 2253839 - | von Willebrand factor type A domain protein AFE_2536 2257174 - 2256344 - | CbbQ/NirQ/NorQ/GpvN family protein TERM 1803 2257134 - 2257119 - G 74 -3.2 -4.83169 | overlap 2257120 ACCGGCTGATAAAAA GGCTCA TCGA TGAGCA CGCGCAAGCCGTCAC AFE_2537 2257572 - 2257171 - | hypothetical protein AFE_2538 2258040 - 2257672 - | hypothetical protein AFE_2539 2258436 - 2258077 - | hypothetical protein TERM 1804 2258161 - 2258140 - G 84 -5.7 -5.00884 | opp_overlap 2258159 ATCCCGGTCAAAAAA GCGATCCGC CCGT GCCGAACGC GCCGCGTCCCGCCGC AFE_2540 2259421 - 2258510 - | biotin/lipoate A/B protein ligase family protein AFE_2541 2259935 - 2259522 - | hypothetical protein TERM 1805 2260030 - 2260009 - R 100 -15.9 -5.24129 | opp_overlap 2260027 GGCGCCCACAAAAAA GGGAGACGG TCGC CCGTCTCCC TCATAACCCGAGGAG AFE_2542 2261405 - 2260062 - | outer membrane protein, OMPP1/FadL/TodX family TERM 1806 2261099 - 2261082 - G 70 -10.5 -3.53444 | CCAGTTCTTGGCAAA GGCCGGG GCCA CCCAGCC GATGGCCGGAACACC TERM 1807 2261597 - 2261584 - R 100 -9.5 -5.64274 | opp_overlap 2261584 TGACTGATAAAAAAA GGGGC CGGA GCCCC TTTTCCGCACCTCGC TERM 1808 2261584 - 2261597 + r 83 -9.5 -4.08767 | opp_overlap 2261584 TGACTGATAAAAAAA GGGGC CGGA GCCCC TTTTCCGCACCTCGC AFE_2543 2262754 - 2261618 - | radical SAM domain protein TERM 1809 2262821 - 2262804 - R 71 -11.3 -2.85996 | overlap 2262803 TAGTATTCATCAAAG GCGATCC AGCC GGATCGC ATCACCCTGTCTTCC AFE_2544 2263840 - 2262779 - | geranylgeranyl reductase family protein AFE_2545 2264907 - 2263837 - | lipoate-protein ligase A, putative TERM 1810 2263899 - 2263877 - G 70 -9.8 -3.54307 | overlap 2263878 AATACCGTCGCGAAA TGCTCCGGCT GTA AGCCGAAGCC ATCGACAGCCTGCTT TERM 1811 2263898 - 2263878 - G 73 -13.3 -2.72263 | overlap 2263877 ATACCGTCGCGAAAT GCTCCGGCT GTA AGCCGAAGC CATCGACAGCCTGCT AFE_2546 2266089 - 2264956 - | radical SAM domain protein TERM 1812 2266138 - 2266108 - R 77 -8.1 -4.1399 | opp_overlap 2266112 TTATGCAGAGAGAAA GCCGGACGGCCGC GAAAT GCGGCCGTCTTCC TGAATCATGACGGAT TERM 1813 2266112 - 2266134 + r 100 -17 -3.19463 | opp_overlap 2266108 GCAGAGAGAAAGCCG GACGGCCGCG AAA TGCGGCCGTC TTCCTGAATCATGAC AFE_2547 2266599 - 2266162 - | glycine cleavage system H protein, putative AFE_2548 2267053 - 2266655 - | hypothetical protein TERM 1814 2266979 - 2266958 - G 76 -6.5 -4.55287 | gap 1, overlap 2266959 2266960 GGCACCCAGATAAAA CG-GCGTCGC ACA GCGATGCGCG GTGCTCGGCCCGCTG AFE_2549 2267496 - 2267050 - | glycine cleavage system protein H, putative TERM 1815 2267550 - 2267532 - R 100 -13.1 -5.76949 | opp_overlap 2267521, overlap 2267544 GACGGGTAAAAAAAA GCGCCCC GCAAA GGGGCGC TTCCCCATACCATTT sdhC 2268476 - 2267565 - | succinate dehydrogenase/fumarate reductase, C subunit AFE_2551 2269188 - 2268469 - | iron-sulfur cluster-binding protein AFE_2552 2270063 - 2269212 - | hypothetical protein TERM 1816 2269981 - 2270008 + gr 79 -13.4 -2.82015 | TCGATCGGCAGCGAG GCGGGAACGATG TGTT CGCCGTTCCCGC TGTGGTGGATATCAG AFE_2553 2271075 - 2270020 - | pyridine nucleotide-disulfide oxidoreductase AFE_2554 2272431 - 2271088 - | heterodisulfide reductase subunit B, homolog AFE_2555 2273128 - 2272442 - | iron-sulfur cluster-binding protein AFE_2556 2273662 - 2273192 - | hypothetical protein AFE_2557 2273936 - 2273706 - | hypothetical protein AFE_2558 2274389 - 2274060 - | rhodanese-like domain protein moaA 2275478 - 2274450 - | molybdenum cofactor biosynthesis protein A AFE_2560 2275749 - 2276054 + | hypothetical protein moaC 2276567 - 2276058 - | molybdenum cofactor biosynthesis protein C TERM 1817 2276753 - 2276770 + H 74 -2.7 -4.91109 | CGCGATGCACACGGC TTGTTGC GGAT GCAGTAA TTTTTCTGCTCCCCC mreB 2276822 - 2277868 + | rod shape-determining protein MreB mreC 2277892 - 2278731 + | rod shape-determining protein MreC TERM 1818 2279131 - 2279148 + G 74 -4 -4.74103 | overlap 2279119 2279129 TAGGGCCACTGATCG GCGCCC TGTTGT GGCCGC TTTTTACGTTGACGC AFE_2564 2278728 - 2279204 + | rod shape-determining protein MreD, putative TERM 1819 2280047 - 2280063 + G 80 -10.9 -3.76402 | overlap 2280037 GCTTATTCGGCCCCC GCATTCG ATC CGAATGC TTTCGTAGATGGCCT mrdA 2279201 - 2281009 + | penicillin-binding protein 2 rodA 2281006 - 2282217 + | rod shape-determining protein RodA TERM 1820 2282458 - 2282442 - g 82 -9.3 -4.4267 | CGCCAAAAGTGAAAA CCTGCGC CGC GCGCCGG CCAGTCTCACCAAAC TERM 1821 2283083 - 2283093 + G 72 -2.4 -4.7254 | AAGCCCTGCTGGATT ACGG ATA CCGC TTTTTCGTCAACCAT AFE_2567 2282251 - 2283417 + | D-alanyl-D-alanine carboxypeptidase AFE_2568 2283480 - 2283962 + | hypothetical protein lipB 2283973 - 2284611 + | lipoate-protein ligase B TERM 1822 2284657 - 2284641 - g 85 -3.5 -5.37593 | overlap 2284642 CCCCAAAGCAAAAAA GCGGCTC GTG GTGCCGA CAAAACCGCACGCAA TERM 1823 2285223 - 2285191 - g 73 -9.8 -3.62859 | gap 1 ATCACAACCTGGAAA CCGTGCCGCGCCTGT ACCT ACAGGCCAGGC-CGG GTGCAGATTACCATC lipA 2284614 - 2285567 + | lipoic acid synthetase AFE_2571 2285582 - 2286382 + | hypothetical protein AFE_2572 2287459 - 2286413 - | ErfK/YbiS/YcfS/YnhG family protein TERM 1824 2286953 - 2286937 - G 71 -6.5 -4.2558 | overlap 2286939 TACCGTGGATGAAAA TACCGGA GAG TCCGGTC TCCATCGCCAGTTCA TERM 1825 2286951 - 2286939 - G 71 -9.1 -3.73042 | overlap 2286937 CCGTGGATGAAAATA CCGGA GAG TCCGG TCTCCATCGCCAGTT AFE_2573 2287612 - 2288043 + | hypothetical protein TERM 1826 2289322 - 2289285 - g 74 -6.9 -4.38927 | overlap 2289286 TGGTGACAGAAGAAA TTCACCGTGATCACCGG CTTA CCGGGAACGACGGTGAG GATGGCATTATTGAA AFE_2574 2288126 - 2289598 + | hypothetical protein TERM 1827 2290509 - 2290537 + G 82 -10.9 -3.88137 | overlap 2290510 TCACGCGCCTGACCA TGTTGCCTGACGC CCT GCGTCTGGCGGCG TTTCTGGCCCGTTCT TERM 1828 2290510 - 2290536 + G 70 -12.2 -2.924 | overlap 2290509 CACGCGCCTGACCAT GTTGCCTGACGC CCT GCGTCTGGCGGC GTTTCTGGCCCGTTC AFE_2575 2289608 - 2290777 + | hypothetical protein AFE_2576 2290837 - 2291403 + | small GTP-binding protein AFE_2577 2291400 - 2292038 + | hypothetical protein AFE_2578 2292084 - 2292446 + | roadblock/LC7 domain protein AFE_2579 2292586 - 2292458 - | hypothetical protein TERM 1829 2293213 - 2293190 - gH 70 -3.8 -4.60487 | gap 1 GACCAGGCGGAAAAA GACTGTCACGC ATT GC-TGGCAGCC GAACTCCCTTTACCC glyQ 2292536 - 2293420 + | glycyl-tRNA synthetase, alpha subunit TERM 1830 2293760 - 2293746 - g 73 -4.2 -4.70659 | overlap 2293747 2293748 CTGGAGACCGAAAAA GGCC CCGTCCT GGCC TGGCGAGAGGTCGGC glyS 2293407 - 2295491 + | glycyl-tRNA synthetase, beta subunit AFE_2582 2295491 - 2296030 + | histidinol-phosphate phosphatase domain protein TERM 1831 2296336 - 2296326 - gT 76 -5.4 -4.65895 | CTTTGTACTGAAAAA GGAA CTC TTCC GCATCCCGGTGATCG AFE_2583 2297611 - 2296703 - | alpha-L-glutamate ligase, RimK family AFE_2584 2296027 - 2296755 + | acyltransferase family protein AFE_2585 2297934 - 2297614 - | hypothetical protein TERM 1832 2297887 - 2297872 - G 74 -6 -4.52589 | overlap 2297874 GGGGGCCAGATAAAA CGCCCG ACAA CGTGCG GCTACCTCCGCTGGC AFE_2586 2298112 - 2299464 + | heterodisulfide reductase subunit B, homolog TERM 1833 2299487 - 2299504 + G 100 -9.8 -5.93252 | opp_overlap 2299484 2299487 TGATGCGCAAAATGA CCCCGC CTTTGC GCGGGG TTTTTTGTTTTTACA AFE_2587 2299471 - 2299944 + | hypothetical protein AFE_2588 2300182 - 2300883 + | hypothetical protein ampD 2301951 - 2301397 - | ampD protein TERM 1834 2301757 - 2301725 - G 83 -2.7 -5.26875 | gap 2, overlap 2301726 2301727 CGGGGAATGAAAAAA TGGGCCGAGACCCGC AGGTG GCGGATC-CGGTC-A TAATAGGGGTGGCGG TERM 1835 2301912 - 2301895 - G 84 -6.2 -5.00616 | overlap 2301896 GCGTTCGTCAAAAAA CGGCGA TGGCGC CCGCCG GGCCGCCCCATGCCA AFE_2590 2302283 - 2301948 - | thioredoxin, putative TERM 1836 2302386 - 2302421 + r 72 -11.3 -3.02459 | gap 1, overlap 2302382 TGCCCTGAAGCGTTA CCGACATCCAAGCC CCTCGATCC GGCTTGGATG-CGG TCTACTTCTTGCGTG AFE_2591 2302768 - 2302544 - | hypothetical protein AFE_2592 2302922 - 2302761 - | hypothetical protein AFE_2593 2303298 - 2302879 - | hypothetical protein gst 2303970 - 2303356 - | glutathione S-transferase TERM 1837 2304173 - 2304163 - H 100 -8.2 -5.16071 | opp_overlap 2304162 AAGTATGAATAAAAA GGGG AAT CCCC AGTCTTGCTCATGGA AFE_2595 2304199 - 2304573 + | transcriptional regulator TERM 1838 2304625 - 2304602 - T 84 -3 -5.40072 | overlap 2304604 CCGCTTCGAAAAAAA GGGGATCTCC TGAA GGAAAACGCC CTCAAGGGATCGGTG leuA-1 2306199 - 2304658 - | 2-isopropylmalate synthase TERM 1839 2305913 - 2305949 + g 77 -15 -2.82516 | opp_overlap 2305901 GTATGGATGCGCCCC GCCGCCGCCCCGGCGA TGGCC TCCCCGGCGCGGCGGA TGTCCTCGTCCCGGG AFE_2597 2307593 - 2306274 - | sigma-54 dependent transcriptional regulator, putative AFE_2598 2307809 - 2307919 + | hypothetical protein AFE_2599 2307992 - 2308378 + | hypothetical protein TERM 1840 2308406 - 2308381 - f 100 -13.3 -4.09685 | gap 1, overlap 2308382 CCTGACTTTTTAAAA TCGC-CGCGCCG GCG CGGCGCGCGCAA GCATAGGAGTGGTAG TERM 1841 2308399 - 2308382 - f 91 -14.1 -3.05597 | overlap 2308381 CTGACTTTTTAAAAT CGCCGCG CCGG CGCGGCG CGCGCAAGCATAGGA AFE_2600 2308422 - 2308652 + | hypothetical protein AFE_2601 2308695 - 2309834 + | pyridine nucleotide-disulfide oxidoreductase TERM 1842 2310526 - 2310546 + T 100 -11.1 -5.36441 | CTCGCCCCGCTTGTA GCTCCCTGA TCT TCCGGGAGC TTTTTTCTGTGGCCC AFE_2602 2310849 - 2310568 - | hypothetical protein TERM 1843 2311332 - 2311319 - g 89 -4.5 -5.28176 | CTGACGGACAAAAAA CAGCG CCAA CGCTA CGTTCAGGTATTGAG AFE_2603 2310953 - 2311564 + | hypothetical protein TERM 1844 2312143 - 2312158 + G 70 -4.6 -4.56597 | overlap 2312144 CTGCTGGAACCCAGC ACAGGG CAGG CCCTGG TTTTTGGCAAACCCG TERM 1845 2312381 - 2312361 - g 74 -3.9 -4.72986 | opp_overlap 2312374 2312378, overlap 2312363 GACGCGCATCAAAAA TCTCTCTGG CGG CCAGCGACA ACGCCTGTCTATCCT AFE_2604 2311933 - 2312856 + | ABC transporter, ATP-binding protein AFE_2605 2312853 - 2314289 + | ABC transporter, permease protein, putative TERM 1846 2314938 - 2314921 - T 75 -6.9 -4.3898 | ATCAGCGTCAGAAAA GCGGAGA GGAT CCCCCGC TGAGCAGAATTGTAG AFE_2607 2315580 - 2315128 - | transcriptional regulator, MerR family TERM 1847 2315238 - 2315251 + gT 74 -3.1 -4.82901 | CCACGACGTCCAGAC TCAGT TGCA GCTGA TTTTTATCCGGGGAC ihfA 2315854 - 2315555 - | integration host factor, alpha subunit pheT 2318263 - 2315864 - | phenylalanyl-tRNA synthetase, beta subunit TERM 1848 2317750 - 2317730 - G 82 -11.1 -3.9392 | overlap 2317706 CCCGAGGGCAAACAA GTCCCTGGC GAC GCCAGCGAC GGACAGCGCATCGCC pheS 2319295 - 2318273 - | phenylalanyl-tRNA synthetase, alpha subunit rplT 2319675 - 2319316 - | ribosomal protein L20 rpmI 2319891 - 2319694 - | ribosomal protein L35 infC 2320419 - 2319901 - | translation initiation factor IF-3 TERM 1849 2320104 - 2320091 - G 78 -6.7 -4.64676 | CCATCTTCAATAAAA CGCAA AATA TTGCG CAACTTGATCTGGTA thrS 2322370 - 2320436 - | threonyl-tRNA synthetase TERM 1850 2322416 - 2322389 - R 100 -9.1 -5.27335 | opp_overlap 2322406 CCCTCCAAAGAAAAA GCACCAGCGAG CATTGC CCCTCTGGTGC GGGATTTGGTAGGCG AFE_2616 2322684 - 2322532 - | hypothetical protein nuoN 2324099 - 2322654 - | NADH-quinone oxidoreductase, N subunit TERM 1851 2322699 - 2322688 - GR 86 -3.6 -5.38054 | GCGTAGAAACAAAAA GCCA TCAA CGGC CCCGGCAGGATACCC TERM 1852 2323025 - 2322988 - GR 84 -3.3 -5.19212 | gap 1, overlap 2322989 2322991 2322993 2322996 ATCATCATCAAAAAA GCATACCAGGGCTT-GCG CTG CGCCAAGCCCTTGAAGTC ATCGATACGCTCCGC TERM 1853 2323020 - 2322993 - GR 71 -10.6 -3.26783 | gap 1, overlap 2322991 2322989 2322988 2322996 CATCAAAAAAGCATA CCAGGGCTT-GCG CTG CGCCAAGCCCTTG AAGTCATCGATACGC TERM 1854 2323362 - 2323344 - GR 76 -10.2 -3.62572 | GATGATCAGGGCAAA GGCGCCGA TTT TGGGCGCC GAAGCAAGAAAGGCG TERM 1855 2323386 - 2323374 - GR 74 -6.9 -4.3255 | overlap 2323376 CGCCGAAGCAAGAAA GGCGG TCA CCACC GTAGGCGCGCCCTGA TERM 1856 2323440 - 2323428 - GR 80 -10.5 -3.91027 | opp_overlap 2323427 2323426 TAACCACATATGAAA GGGCG CCG CGCCC AATTTGAAGGCAATA TERM 1857 2323956 - 2323937 - GR 78 -6.4 -4.62069 | gap 1 GCCCCATCTCAAAAA CGGT-CAGC ACG GCCGCACCG CTGAGGGTCAGCACG TERM 1858 2324153 - 2324136 - R 71 -11.3 -2.99319 | opp_overlap 2324138, overlap 2324138 AATCTTGGAGAGAGA CACCTGG GTCA CCAGGTG CTGTACCGAGCTGTG nuoM 2325596 - 2324112 - | NADH-quinone oxidoreductase, M subunit nuoL 2327564 - 2325600 - | NADH-quinone oxidoreductase, L subunit TERM 1859 2326786 - 2326745 - G 84 -5.9 -4.91109 | gap 1, overlap 2326747 2326748 GTGCGACCATAAAAA TACCCGCCGTGA-CCATG GTCGCCG CATGGATCAGGGCGGAGA TGGGGGTCGGGCCCT TERM 1860 2326784 - 2326747 - G 71 -8.5 -4.08042 | gap 1, overlap 2326745 2326748 GCGACCATAAAAATA CCCGCCGTGA-CCATG GTCGCCG CATGGATCAGGGCGGA GATGGGGGTCGGGCC nuoK 2327901 - 2327584 - | NADH-quinone oxidoreductase, K subunit TERM 1861 2327858 - 2327848 - G 76 -6.8 -4.56358 | CACACCGATAGAAAA GAGC ATC GCTC CGAGAATCAGGTAGG nuoJ 2328497 - 2327901 - | NADH-quinone oxidoreductase, J subunit nuoI 2329004 - 2328513 - | NADH-quinone oxidoreductase, I subunit TERM 1862 2328722 - 2328757 + g 77 -11.7 -3.69323 | overlap 2328721 GATCGATGTCGTAGC GCGTCGTCCGCCGCG TTCCAT CGCTACGGACGTCGC TTTCGATGGTAATGG TERM 1863 2328953 - 2328928 - G 74 -3.9 -4.79949 | gap 1, overlap 2328930 CGCGCAAAAAAATAA CGGC-CGGTAAG CTG CATACCGCGCAG CATCTCCGTCAGGAA nuoH 2330040 - 2329015 - | NADH-quinone oxidoreductase, H subunit nuoG 2332400 - 2330052 - | NADH-quinone oxidoreductase, G subunit TERM 1864 2330541 - 2330563 + g 70 -4.7 -4.56597 | overlap 2330542 ACGCAGTATCTTCCA GGCCGGACG TGCCT CCTCCGGCG TTTTTACCGCGGCGC TERM 1865 2331590 - 2331574 - G 71 -9.3 -3.78022 | opp_overlap 2331569 2331576 TCGACACGCAGCAAA GGCCGCG TCA CGCGGTC TTCCGCTTGTAGGCC TERM 1866 2332323 - 2332308 - G 84 -9 -4.49377 | GTGATAACAAAAGAA GGGGAT ATAG ATCCCC AAAGCCTGGGCCGCC nuoF 2333683 - 2332400 - | NADH-quinone oxidoreductase, F subunit nuoE 2334164 - 2333673 - | NADH-quinone oxidoreductase, E subunit nuoD 2335421 - 2334168 - | NADH-quinone oxidoreductase, D subunit TERM 1867 2334208 - 2334194 - G 77 -8.6 -4.40561 | TCTCGCCAAAAACAA TGTCCA TGG TGGACA AAATAGCCACCACGT TERM 1868 2334276 - 2334289 + g 75 -8.1 -4.26903 | GGCGAGATGCGGGAA TCCGG GTGC CCGGA TTTTCATCCGGTAGG nuoC 2336013 - 2335405 - | NADH-quinone oxidoreductase, C subunit nuoB 2336493 - 2336017 - | NADH-quinone oxidoreductase, B subunit nuoA 2336840 - 2336484 - | NADH-quinone oxidoreductase, A subunit TERM 1869 2336965 - 2336951 - R 100 -11.4 -5.76633 | opp_overlap 2336949 TCAGAGATAAAAAAA CAGCCC GTA GGGCTG CAATTTGGTGCCGAA secG 2337497 - 2337096 - | preprotein translocase, SecG subunit TERM 1870 2337272 - 2337257 - G 80 -3.2 -5.02074 | CGATGCCGGAAAAAA CACTGC TGCT GGAGTG ATCGGAAAGATAGGC tpiA 2338275 - 2337502 - | triosephosphate isomerase TERM 1871 2338196 - 2338241 + g 85 -16.3 -3.13382 | gap 1, opp_overlap 2338200 2338201, overlap 2338200 2338201 TCCAGCCCTGCGTGA AGAATGGCCTGAGT-GAGATGC ACG GCATCCCCACTCAGGCCGTTCA TCTTCCAATTTCCTG TERM 1872 2338237 - 2338200 - G 93 -15.7 -3.61398 | gap 1, opp_overlap 2338196 2338200 2338201, overlap 2338201 GCCCTGCGTGAAGAA TGGCCTGAGTGA-GATGC ACG GCATCCCCACTCAGGCCG TTCATCTTCCAATTT TERM 1873 2338200 - 2338237 + g 89 -15.7 -3.38361 | gap 1, opp_overlap 2338200 2338201, overlap 2338196 2338201 GCCCTGCGTGAAGAA TGGCCTGAGT-GAGATGC ACG GCATCCCCACTCAGGCCG TTCATCTTCCAATTT TERM 1874 2338201 - 2338236 + g 83 -17 -2.62293 | gap 1, opp_overlap 2338201 2338200, overlap 2338200 2338196 CCCTGCGTGAAGAAT GGCCTGAGT-GAGATGC ACG GCATCCCCACTCAGGCC GTTCATCTTCCAATT TERM 1875 2338236 - 2338201 - G 88 -19.2 -2.76696 | gap 1, opp_overlap 2338200 2338196 2338201, overlap 2338200 CCCTGCGTGAAGAAT GGCCTGAGTGA-GATGC ACG GCATCCCCACTCAGGCC GTTCATCTTCCAATT glmM 2339746 - 2338382 - | phosphoglucosamine mutase folP 2340618 - 2339785 - | dihydropteroate synthase TERM 1876 2340594 - 2340569 - G 76 -10.4 -3.75378 | ACTCCCATAACACAA GGGCGCCC GAGAACCAGG GGGCGCCC ATTGCAATCCAGCGT ftsH 2342540 - 2340615 - | cell division protein FtsH TERM 1877 2341785 - 2341797 + g 70 -3.3 -4.63527 | opp_overlap 2341785 GTCAATGAAGATAAT GCAGG GGG CATGC TTTTTGGCCTGCTCA tldD 2344083 - 2342638 - | tldD protein TERM 1878 2347187 - 2347162 - g 76 -5.4 -4.62336 | opp_overlap 2347182, overlap 2347164 ACGGCAGCGGAAAAA TCGACGGTGC AGACGG GCACCCTCAA TGCGGTCGTATCAGG nrdA 2344408 - 2347254 + | ribonucleotide-diphosphate reductase, alpha subunit nrdB 2347267 - 2348409 + | ribonucleoside-diphosphate reductase, beta subunit AFE_2640 2348901 - 2349170 + | hypothetical protein AFE_2641 2349182 - 2349523 + | transcriptional regulator, ArsR family TERM 1879 2349759 - 2349733 - g 79 -12.2 -3.53012 | opp_overlap 2349733 2349732 TTCGGTCTGGTGAAA GGAGCCCTCAAC CTG GTGGCGGGCTCC CTTTCCGATCGTGTC TERM 1880 2350471 - 2350485 + G 100 -10 -4.7878 | overlap 2350461 GGCTTGGCGGCCACT GCCTTG GTG CAAGGC TTTGTTTTGTGGATG AFE_2642 2349520 - 2350797 + | hypothetical protein TERM 1881 2350872 - 2350905 + G 71 -7.3 -4.2828 | gap 1 GCGGTGCGTCTTGCC GGCGC-CATGCTGGCC GAG GGCAAGGAGGTGCGCC TTTTCCTGGCTGGAC AFE_2643 2350794 - 2351135 + | hypothetical protein TERM 1882 2351413 - 2351454 + G 77 -11.6 -3.57144 | gap 2, overlap 2351414 GGCCCGCGTCGGCAG CCGGATTGCAGGGCCGGCCA TGGA TGGCCTGCCCTGCA--CCGA TTTCGGGGTGGCCGA TERM 1883 2351414 - 2351453 + G 77 -15.1 -2.74144 | gap 2, overlap 2351413 GCCCGCGTCGGCAGC CGGATTGCAGGGCCGGCCA TGGA TGGCCTGCCCTGCA--CCG ATTTCGGGGTGGCCG TERM 1884 2351771 - 2351755 - g 79 -9.3 -4.2558 | CATTGCCCAGGAAAA GGAGCGG AAC CCGCGCC TGGCCGGCAAAAGCT AFE_2644 2351189 - 2351941 + | metallo-beta-lactamase family protein AFE_2645 2352722 - 2352321 - | hypothetical protein AFE_2646 2353202 - 2352957 - | hypothetical protein AFE_2647 2353449 - 2353318 - | hypothetical protein TERM 1885 2353829 - 2353814 - H 85 -6.8 -4.93968 | ACCTAGAACCAAAAA GGCAGC CACT ACTGCC AAGGTAATCGCAAGA AFE_2648 2354638 - 2355072 + | hypothetical protein AFE_2649 2355318 - 2355199 - | hypothetical protein AFE_2650 2355857 - 2355693 - | hypothetical protein AFE_2651 2355887 - 2356981 + | copper resistance protein, putative AFE_2652 2357000 - 2357146 + | hypothetical protein AFE_2653 2357887 - 2357600 - | hypothetical protein TERM 1886 2358799 - 2358809 + G 93 -8.2 -4.98255 | CTCCGAGTGGCGCAA GCCC AAC GGGC TTTTTGTGGTTCCAC dinB 2358296 - 2359432 + | DNA polymerase IV AFE_2655 2359433 - 2359819 + | PIN domain protein AFE_2656 2360626 - 2359889 - | hypothetical protein TERM 1887 2360448 - 2360414 - G 72 -11.3 -3.36749 | opp_overlap 2360413 2360412 GAGGGCGAAGAGGAA GCCTGCGGGCGTGCC GTCAT GCCAGGCGCGCAGGC ACTTCTCGCTGGGCA TERM 1888 2360542 - 2360516 - G 76 -9.2 -4.07568 | overlap 2360502 2360539 GCGCCCGGCGTAAAA GGCCAGCCGACC TGT GGAAGGCAGGCC AGGCGGATAAAACGC AFE_2657 2360760 - 2360635 - | hypothetical protein AFE_2658 2361174 - 2361476 + | hypothetical protein TERM 1889 2361875 - 2361892 + G 78 -4.7 -4.82901 | overlap 2361876 GCGCCTTGGCGGCGG CCCCGCT GCTG GGCGGGC TTTTTGTGGAGCAGG TERM 1890 2362817 - 2362840 + G 78 -5.2 -4.84359 | gap 1, overlap 2362822 GGCCCTTGCCCGTCG GCGGTGAAGGC GCG GCCTCC-CTGC TTTTTATCGCGCTGG AFE_2659 2361538 - 2362944 + | amino acid permease family protein dcd 2363622 - 2363056 - | deoxycytidine triphosphate deaminase mrp 2364728 - 2363652 - | Mrp protein AFE_2662 2365057 - 2364743 - | antibiotic biosynthesis monooxygenase family protein dapB 2365917 - 2365087 - | dihydrodipicolinate reductase dnaJ 2367044 - 2365917 - | chaperone protein DnaJ TERM 1891 2366805 - 2366793 - G 76 -10.5 -3.72695 | ACCGCCTCCACCAAA GCCGG CAC CCGGC CCACCGCCGCCGCCA TERM 1892 2367005 - 2366953 - G 72 -11.3 -3.29144 | gap 1, opp_overlap 2367001 CGATCCGGGTGATAA CGCATCGCCAGACGCCGGTAAGAC TTCTTG ATCTCGCCGTCGTCTGCCG-TGCG GGAAATTTCCAGTAC TERM 1893 2367101 - 2367059 - R 89 -13.6 -3.53012 | gap 2, opp_overlap 2367056 TCTTCTTTCCTGAAA CGG--GCAAGGGGACAGGAT AACAA ATCCCGCCCCCTTGCGACCG ATGGTAATTTTACTT dnaK 2369015 - 2367111 - | chaperone protein Dnak grpE 2369576 - 2369061 - | co-chaperone GrpE hrcA 2370671 - 2369649 - | heat-inducible transcription repressor HrcA TERM 1894 2370304 - 2370278 - GH 86 -10.2 -4.10657 | gap 1, overlap 2370279 CCACATGCCGCAAAA TGCGGGTTGCC CGCCGC GGCA-CCCGCA CAAAGCCCGCCATAT AFE_2668 2370670 - 2370762 + | hypothetical protein rpmG 2371061 - 2370906 - | ribosomal protein L33 rpmB 2371308 - 2371072 - | ribosomal protein L28 metG 2371419 - 2373455 + | methionyl-tRNA synthetase AFE_2671 2374566 - 2373448 - | phospho-2-dehydro-3-deoxyheptonate aldolase, putative TERM 1895 2374126 - 2374095 - G 73 -5.1 -4.62069 | gap 1, overlap 2374096 2374099 CGGCCAGTTCAAAAA CCCAGGGCA-GGCA GTCCT TGCCGTGCCCCTGA AAGGCGTAAGGACTG fumC 2376018 - 2374645 - | fumarate hydratase, class II AFE_2674 2377816 - 2376020 - | oligoendopeptidase F, putative TERM 1896 2376131 - 2376157 + g 88 -13.6 -3.57263 | CGTTGTCGCCACCAC CTCGGCGGGCGC CTT GCTCCCACCGAG TTTCAGCATGGCGGT TERM 1897 2376579 - 2376565 - G 72 -2.8 -4.7373 | GCATTTCACCAAAAA CGGA GGCCGTT TCCG CGGTGGTCAGGGGGG TERM 1898 2377304 - 2377288 - G 72 -2.1 -4.7254 | overlap 2377290 ATGTCTCATCAAAAA GCCGCTC CCA GAGCCCC CGTCCGGTCACCCGT AFE_2675 2378348 - 2377860 - | hypothetical protein AFE_2676 2378470 - 2380173 + | hypothetical protein TERM 1899 2380218 - 2380193 - T 100 -17.5 -4.57569 | opp_overlap 2380193 TCACGCCCGCAAAAA GGCCCCGGTCC TTGT GGTCCGGGGCC TTTGCGTCGTAGAGC TERM 1900 2380193 - 2380218 + T 100 -17.5 -3.68351 | opp_overlap 2380193 TCACGCCCGCAAAAA GGCCCCGGTCC TTGT GGTCCGGGGCC TTTGCGTCGTAGAGC AFE_2677 2380808 - 2380239 - | 3-deoxy-D-manno-octulosonic-acid transferase domain protein TERM 1901 2381426 - 2381452 + G 71 -6.5 -4.14392 | gap 1, overlap 2381429 TCGATCTTGAAGCGC GCATCGGC-GCC GCGC GGCCGCCGGTCC TTTTCACCATTCACA TERM 1902 2381545 - 2381565 + G 76 -6.7 -4.45544 | overlap 2381560 GATTTTCACTGGCTC GGCACCGAA CAC TACGGAGCC TTTTCCTTCATGAAG glgA 2380966 - 2382435 + | glycogen synthase TERM 1903 2383287 - 2383301 + G 84 -5.6 -4.91712 | opp_overlap 2383280 ATGACAACCAGATTC CCGCCA ACC TGCCGG TTTTTCTCGATTCGC AFE_2679 2382476 - 2383864 + | metallo-beta-lactamase family protein AFE_2680 2383948 - 2384364 + | hypothetical protein TERM 1904 2385023 - 2385056 + G 78 -6.5 -4.68593 | gap 1, overlap 2385024 GGCCGCTATACCTGC ACGGCGAGGCGGCCGC ACT GCGGCCACTGC-CCGA TTTTTCAGTGCTGCG nth 2384462 - 2385124 + | endonuclease III AFE_2681 2387065 - 2385104 - | TPR domain protein TERM 1905 2387382 - 2387392 + r 70 -3.2 -4.8048 | ATAATCTAAACAAAG CGGT AAC ATCG TTTTTGATATCGGAC TERM 1906 2387491 - 2387467 - R 93 -15.7 -3.15056 | opp_overlap 2387481 2387484, overlap 2387465 ATCGGTAATGTAAGA CGGATCGGTGC GCG GCGCCGATCCG GTGTGCAACCGGAGC AFE_2683 2387639 - 2387448 - | hypothetical protein TERM 1907 2388616 - 2388576 - g 78 -7.5 -4.67904 | overlap 2388568 2388579 2388600 2388609 CAGCAACCTGAAAAA TCAGCAGGGCACCGACGTC ACC AACATCAGCAACCTGCAGA AACAACAGGCCACCG TERM 1908 2388742 - 2388702 - g 78 -7.5 -4.67904 | overlap 2388694 2388705 2388726 2388735 CAGCAACCTGAAAAA TCAGCAGGGCACCGACGTC ACC AACATCAGCAACCTGCAGA AACAACAGGCCACCG AFE_2684 2387677 - 2389797 + | hemagluttinin family protein AFE_2685 2389908 - 2390459 + | OmpA family protein TERM 1909 2390468 - 2390517 + T 78 -13.5 -2.64472 | opp_overlap 2390476 2390478 2390502, overlap 2390465 2390465 GCCCTGACCATAGGA CCGACCAAGACTCTGGTTCCTGC GCCG GCAGGAACCAGGGTTCCGGCAGG TGGCTTTCAGGACTG TERM 1910 2390509 - 2390476 - T 87 -13.9 -3.1994 | opp_overlap 2390468 2390465 2390465, overlap 2390478 2390502 CATAGGACCGACCAA GACTCTGGTTCCTGC GCCG GCAGGAACCAGGGTT CCGGCAGGTGGCTTT TERM 1911 2390507 - 2390478 - T 100 -16.5 -3.15996 | opp_overlap 2390468 2390465 2390465, overlap 2390476 2390502 TAGGACCGACCAAGA CTCTGGTTCCTGC GCCG GCAGGAACCAGGG TTCCGGCAGGTGGCT AFE_2686 2391621 - 2390524 - | hypothetical protein TERM 1912 2390805 - 2390849 + g 83 -15.8 -3.06183 | gap 1, opp_overlap 2390818 CGTTGCCATGTTCCG CGGCGCGTAAAAACCAGG-TG TAGG CAGCCTGGTCGTTGCGCGCCG TTCCATAGCCGTGGG TERM 1913 2390836 - 2390818 - G 74 -5.3 -4.56597 | gap 1, opp_overlap 2390805 CGCGGCGCGTAAAAA CCAGG-TG TAGG CAGCCTGG TCGTTGCGCGCCGTT TERM 1914 2391215 - 2391240 + g 76 -8.9 -4.09685 | gap 1, opp_overlap 2391211, overlap 2391213 CCCATATTGAACTCC GCCGC-GGCGTC ACC GGCGACGGCGGC TTTTCGCCAGTACGC TERM 1915 2392295 - 2392272 - g 72 -12.4 -3.04263 | ACGCCATGGCGAACA TGGCCACCAG CATC CCGGCGGCCA CCGCCTCCATCGTCG AFE_2687 2391839 - 2392426 + | hypothetical protein TERM 1916 2392460 - 2392487 + F 100 -15.6 -3.27951 | opp_overlap 2392458 2392459, overlap 2392463 CCGATTTAAGTAACG CGACAGCGCGGG GAAA CTCGCGCTGTTG TCTTATCATCAGGTG TERM 1917 2392463 - 2392484 + F 93 -13.7 -3.77808 | opp_overlap 2392458 2392459, overlap 2392460 ATTTAAGTAACGCGA CAGCGCGGG GAAA CTCGCGCTG TTGTCTTATCATCAG AFE_2688 2392505 - 2392993 + | hypothetical protein AFE_2689 2393791 - 2392997 - | TonB family protein AFE_2690 2395580 - 2393784 - | type I secretion outer membrane protein, putative TERM 1918 2393965 - 2393989 + g 71 -5.7 -4.30576 | overlap 2393966 2393967 CCGGCATTCATGGTC TTGATTTGCGC GGC GTGCAGATCGG TTTTACTGATACGCC AFE_2691 2395758 - 2395612 - | hypothetical protein AFE_2692 2397133 - 2395736 - | type I secretion membrane fusion protein, HlyD family AFE_2693 2399309 - 2397135 - | type I secretion system ATPase TERM 1919 2399237 - 2399292 + g 73 -5.1 -4.63932 | opp_overlap 2399246, overlap 2399234 2399241 2399265 2399267 GGCATTGCAGCCCGC TGGAGGCAATGCCACCGGCCTTGCC TTGAGC GGCGGGCCCGGTGGCGCCGCCGTGG TTTTCTTCCGCCGTC TERM 1920 2399241 - 2399288 + g 76 -14.7 -2.54841 | opp_overlap 2399246, overlap 2399234 2399237 2399265 2399267 TTGCAGCCCGCTGGA GGCAATGCCACCGGCCTTGCC TTGAGC GGCGGGCCCGGTGGCGCCGCC GTGGTTTTCTTCCGC TERM 1921 2399267 - 2399289 + g 74 -12.7 -3.25538 | gap 1, opp_overlap 2399246, overlap 2399241 2399265 2399237 CGGCCTTGCCTTGAG CGGCGG-GCC CGGT GGCGCCGCCG TGGTTTTCTTCCGCC AFE_2694 2399944 - 2399306 - | hypothetical protein TERM 1922 2399584 - 2399594 + gH 72 -2.4 -4.77165 | TCTGCTGCTCCAGTT CCGC TTC GCGC TTTTGTTGTGCCAGC TERM 1923 2400042 - 2400052 + Gr 76 -6.8 -4.4518 | opp_overlap 2400015 GCGAATACCGCCATC CGGA TAC TCCG TTTTCCGTTTTGCTT AFE_2695 2399916 - 2400143 + | hypothetical protein AFE_2696 2401577 - 2400189 - | sigma-54 dependent transcriptional regulator TERM 1924 2400263 - 2400279 + g 95 -6.5 -5.40072 | GTGCCTCAGCCGTTT CCAGTCG ACG CCACTGG TTTTTTTCCAGCGCG TERM 1925 2400453 - 2400435 - G 79 -9.5 -4.18197 | overlap 2400445 ATGGCCGAGGTAAAA GGCGGCA AGACG CGCCGCC CGGTTGAATAATTCA TERM 1926 2400830 - 2400820 - G 78 -4.6 -4.83169 | ACCTGCTGATAAAAA GGCA GGT CGCC GATTTCGTCCAGATA AFE_2697 2403349 - 2401577 - | hypothetical protein TERM 1927 2401934 - 2401958 + g 100 -9.9 -4.77036 | overlap 2401936 GCCATTTAAGCCTTG GGCGCTCAGCG GCA CGATGAGCGGC TTTTTCATGGTGACA TERM 1928 2402494 - 2402507 + g 72 -2.3 -4.82901 | overlap 2402489 GCAGGTTGACCTGCG CGTTG ACGG CGGCG TTTTTGTCGGCCAGA AFE_2698 2403944 - 2403333 - | hypothetical protein TERM 1929 2403379 - 2403402 + g 76 -5.9 -4.72272 | overlap 2403380 CCATTGCTCATTCCT TGCAGGGCG ACGCTG CTCCCTGCG TTTTTCGTCGAAGAC AFE_2699 2404780 - 2403941 - | lipoprotein, putative tadC 2405721 - 2404783 - | tight adherence protein TadC TERM 1930 2404911 - 2404929 + g 70 -3.1 -4.72272 | gap 1, overlap 2404914 GCTTTCCGACCCTTT CGCGCAGG GCCA TCTGC-CG TTTTTCCTGAAGGCG tadB 2406670 - 2405729 - | tight adherence protein TadB, putative TERM 1931 2406271 - 2406253 - G 76 -12.4 -3.31144 | CCGGCAGGGCGAGAA TCGCGGCG CTG CGCCGCAA ACCGATCCGGTAGCG TERM 1932 2406460 - 2406470 + g 81 -5.4 -4.82901 | overlap 2406441 2406447 CCTCCGCCTGGAGCA GGAA GGA TTCC TTTTTGTACCGGGCG tadA 2408001 - 2406667 - | tight adherence protein TadA AFE_2703 2409227 - 2407998 - | pilus assembly protein CpaE, putative TERM 1933 2408314 - 2408332 + g 88 -2.4 -5.53288 | gap 1, overlap 2408317 CGAGTGCCGATCTTT TC-CCGC AGATTG GCGGCGA TTTTTTTCCCTTCGA AFE_2704 2410660 - 2409224 - | bacterial type II/III secretion system protein TERM 1934 2409321 - 2409341 + g 72 -12.5 -3.05384 | opp_overlap 2409302 2409317 2409318 GAATGGGCAAAGGCC GCTCCCGGC AAG GGCGGGAGC TTGGCTCCGGCGGCG TERM 1935 2410458 - 2410400 - G 82 -11.4 -3.96148 | opp_overlap 2410418 GCCGGTGATCAGAAA CTGCCGGCCGCCGGAACGCGGCAGCGGC GCC ACCGATGCCGTTTTCGGGTTGCCGACGG CCACCCGGTAGGCCG TERM 1936 2410418 - 2410440 + g 84 -10.5 -4.19238 | opp_overlap 2410400 CCGGCCGCCGGAACG CGGCAGCGG CGCCA CCGATGCCG TTTTCGGGTTGCCGA AFE_2705 2411645 - 2410674 - | hypothetical protein TERM 1937 2410969 - 2410945 - GH 72 -12.1 -2.82635 | AGCGCGAGCAGGAGA TGGCCCTGACC GCT GGCCAGCGCCA GGGTCGCGGCGGAGG TERM 1938 2411109 - 2411071 - GH 74 -6.5 -4.25104 | GCCGCCGGACCAAAA GCCGACGGCTCGCCCTG GGCGA CATGGCGCACCACCGTC TGCGGCCCCACCGCC TERM 1939 2411441 - 2411476 + gH 100 -15.5 -4.07568 | gap 1, opp_overlap 2411432 AATGCAGGACCTTGA CCCCGTCCGGCGGGAT GGGGA ATCCCGCCG-ACAGGG TTTTGGCCGCCACCA TERM 1940 2411514 - 2411536 + gH 77 -7.6 -4.35116 | overlap 2411517 CACCCCCGCCGTCGG CTGCTGCGGC GCC GCCGCACTGG TTTTGCTCTGCACTA AFE_2706 2411644 - 2411748 + | hypothetical protein AFE_2707 2412239 - 2411754 - | hypothetical protein AFE_2708 2412691 - 2412248 - | hypothetical protein TERM 1941 2412748 - 2412738 - H 78 -6.8 -4.59773 | GGTCATTGTGAAAAA TCCC CTG GGGA CTGCCGTCCCGCCTG AFE_2709 2413117 - 2414343 + | ISAfe3, transposase AFE_2710 2414666 - 2414427 - | pilin, putative TERM 1942 2414657 - 2414640 - G 73 -4.9 -4.68384 | gap 1 ATCCACCCAAGAAAA TGTCCGTT CCC AACGG-CA GAGTCCCATCCGCCC AFE_2711 2416050 - 2414893 - | hypothetical protein TERM 1943 2416029 - 2416072 + g 100 -18.1 -3.59738 | gap 1, opp_overlap 2416010 GCGGGACGGTTCCAT CCATCCGGCACGGGGTGGCC ATATC GGCC-CCCCGTGCCGGGCCG TTTCCGGGTGTAATC AFE_2712 2416116 - 2416568 + | hypothetical protein TERM 1944 2416606 - 2416631 + T 89 -9 -4.62069 | gap 1 CGCAGACCACTTTCC GCGCGCCGGTC ACCGA GATCGGC-CGC TTTTTGCCATCGCCG AFE_2713 2417049 - 2416675 - | hypothetical protein AFE_2714 2417330 - 2417016 - | hypothetical protein AFE_2715 2417685 - 2418122 + | acetyltransferase, GNAT family AFE_2716 2420438 - 2418150 - | TPR domain/sulfotransferase domain protein TERM 1945 2418482 - 2418498 + g 74 -10.9 -3.42078 | GGTCGTGGCTGTAGG CATGGTC CCC GACCATG TTCTGCTGAAATATG TERM 1946 2419558 - 2419540 - G 77 -14.6 -2.82623 | overlap 2419537 GTTTCGGGATAACGA CCCTGCTG GAA CAGCAGGG TACCCAGAGGATAGC TERM 1947 2420413 - 2420426 + g 78 -2.3 -5.03715 | TGAGCGGCGTCTTTT CCCGA GGGG TCGCG TTTTTTAAACATCCT AFE_2717 2420940 - 2420539 - | hypothetical protein TERM 1948 2421378 - 2421362 - g 80 -3.6 -5.03314 | overlap 2421363 TCTATCCCGAAAAAA TCGGTG CCGCC CACCGC GAGGCCGACCTGCAT TERM 1949 2421437 - 2421461 + G 71 -7.9 -4.08767 | gap 1, overlap 2421434 ATTGTGCCGGATGGT CCCTCC-GCA CCCTTT TGCAGGAGGG TTTTAACGGCGTACC nrdD 2421121 - 2422896 + | anaerobic ribonucleoside-triphosphate reductase, alpha subunit TERM 1950 2422894 - 2422879 - f 75 -6 -4.57569 | overlap 2422880 CGACTTGCTGAAAAA CGGCGG CATT CCGCCT GAACCGAGAAAGGAG TERM 1951 2422893 - 2422880 - f 70 -9.5 -3.3422 | overlap 2422879 GACTTGCTGAAAAAC GGCGG CATT CCGCC TGAACCGAGAAAGGA AFE_2719 2422916 - 2423122 + | hypothetical protein nrdG 2423151 - 2423852 + | anaerobic ribonucleoside-triphosphate reductase, beta subunit AFE_2721 2425393 - 2423861 - | lipoate-protein ligase A, putative TERM 1952 2424109 - 2424137 + g 80 -3.9 -5.06451 | overlap 2424110 CTTGTAGCTTGAGCG TTTTCAGTGTCTG CTC CAGATGCTCAAAG TTTTTTACGGTGGTG TERM 1953 2425255 - 2425271 + g 75 -7.9 -4.25283 | overlap 2425256 CCTCGAAGGCGCCCA GGGCCAC CGC GTGGCCA TTTTCATAAAAACGT yhbV 2426285 - 2425407 - | peptidase, U32 family TERM 1954 2426144 - 2426162 + g 71 -8 -4.07687 | TGTCGAGCCAGTCGG CGCTGCGC AGG GCGCGTCG TTTTGCGCACACGGT AFE_2723 2427373 - 2426363 - | peptidase, U32 family AFE_2724 2428018 - 2427404 - | hypothetical protein TERM 1955 2429386 - 2429399 + G 85 -3.7 -5.42862 | overlap 2429385 2429387 CAAAAGCAGATCGGC GCCGC CATG GCGGA TTTTTTTGGGAATGT AFE_2726 2429353 - 2429700 + | hypothetical protein cycA-2 2429913 - 2430566 + | cytochrome c4 sdr_2 2430572 - 2431381 + | oxidoreductase, short-chain dehydrogenase/reductase family petA-2 2431412 - 2432032 + | ubiquinol--cytochrome c reductase, iron-sulfur subunit petB-2 2432060 - 2433274 + | ubiquinol--cytochrome c reductase, cytochrome b subunit petC-2 2433297 - 2433998 + | ubiquinol--cytochrome c reductase, cytochrome c1 subunit TERM 1956 2434353 - 2434374 + G 70 -10.1 -3.5365 | overlap 2434355 GTAAGGTGGTAGCCG GACCCGTCG CACC CGACGGGTA TTGTATAGCGTTTAC TERM 1957 2434355 - 2434372 + G 76 -12.7 -3.33814 | overlap 2434353 AAGGTGGTAGCCGGA CCCGTCG CACC CGACGGG TATTGTATAGCGTTT iro 2434085 - 2434405 + | iron oxidase TERM 1958 2434434 - 2434456 + F 100 -12 -5.43553 | overlap 2434435 GGAGTTCCTCCTGCT TCTCCCCTTC TCT GAAGGGGAGC TTTTATTTTTTACGT TERM 1959 2434435 - 2434455 + F 100 -15.5 -3.83692 | overlap 2434434 GAGTTCCTCCTGCTT CTCCCCTTC TCT GAAGGGGAG CTTTTATTTTTTACG AFE_2733 2434579 - 2435031 + | hypothetical protein AFE_2734 2435132 - 2435740 + | hypothetical protein TERM 1960 2435796 - 2435774 - T 100 -12 -4.78848 | GCGGGAAAGAGAAAA GGCCCGGAAT GCG ATCCCGGACC CTTGCGGGAGTTGGT rrmJ 2436554 - 2435895 - | ribosomal RNA large subunit methyltransferase J AFE_2737 2436644 - 2436928 + | hypothetical protein AFE_2738 2437018 - 2437401 + | apaG protein AFE_2739 2437398 - 2438003 + | phosphatidylethanolamine N-methyltransferase, putative TERM 1961 2438054 - 2437999 - T 100 -22.8 -2.66882 | gap 1, opp_overlap 2438001 2438012, overlap 2437991 2438012 AAAAATCTGACACCA TGTGACACGGAAATGGCCCGGAGCC TCATATC GGCTCCGGGCCATTTCCG-GTCATT CCTCTACGACGATGT TERM 1962 2438001 - 2438052 + T 100 -29.8 -3.25942 | gap 1, opp_overlap 2437991 2437999 2438012, overlap 2438012 AAATCTGACACCATG TGACACGGAAATGGCCCGGAGCC TCATATC GGCTCCGGGCCATTTCCG-GTCA TTCCTCTACGACGAT TERM 1963 2438012 - 2438042 + T 100 -19.8 -3.64162 | opp_overlap 2437999 2438012, overlap 2438001 CATGTGACACGGAAA TGGCCCGGAGCC TCATATC GGCTCCGGGCCA TTTCCGGTCATTCCT TERM 1964 2438042 - 2438012 - T 100 -19.8 -3.71378 | opp_overlap 2438012 2438001, overlap 2437999 CATGTGACACGGAAA TGGCCCGGAGCC TCATATC GGCTCCGGGCCA TTTCCGGTCATTCCT typA 2439888 - 2438071 - | GTP-binding protein TypA TERM 1965 2439944 - 2439922 - R 89 -3.2 -5.60689 | opp_overlap 2439936 2439938, overlap 2439923 2439924 2439936 GGACATAAGAAAAAA CGCCGGGACC ACA AGCCCCGCAG CGGGCTTTCTTATAA TERM 1966 2440006 - 2439989 - R 100 -14.1 -5.43974 | AAAAGCAAATAAAAA CCGCCCC CGAG GGGGCGG CAATGGACCACCGAA omp40 2441259 - 2440045 - | major outer membrane protein 40 TERM 1967 2441235 - 2441222 - G 74 -5.9 -4.5442 | CCGGGAACCACAAAA GCCGC TGCG ACGGC CAAAGCTACGAGATT TERM 1968 2441612 - 2441638 + G 83 -16 -3.06133 | overlap 2441603 GATTCTGCGTTGTCC GCCCTGCGTTTT ACC AAAATGCAGGGC TTGGGTAACGACTTC TERM 1969 2441647 - 2441657 + G 85 -6.8 -4.7373 | overlap 2441603 GCAGGGCTTGGGTAA CGAC TTC GTCG TTTTTGATGGCATCC dapF 2441606 - 2442472 + | diaminopimelate epimerase AFE_2744 2442456 - 2442650 + | hypothetical protein AFE_2745 2442651 - 2443334 + | hypothetical protein TERM 1970 2444066 - 2444027 - g 77 -3.5 -5.00616 | gap 1, overlap 2444028 2444029 GTGCGGGTCAAAAAA CTCGGCGATGC-GCGGCT CGGGC AGCCACTGCATCCCCATA CCCTACGCCACAGCG xerC 2443328 - 2444272 + | tyrosine recombinase XerC hslV 2444287 - 2444808 + | heat shock protein HslV TERM 1971 2445879 - 2445895 + G 71 -9.4 -3.71649 | opp_overlap 2445848 2445849, overlap 2445868 TACGGTGCGTTGCTG GCCAGC GACGG GCTGGC TTTACACTTTACCCA hslU 2444811 - 2446133 + | heat shock protein HslVU, ATPase subunit HslU AFE_2749 2446488 - 2446156 - | hypothetical protein rpoH 2447345 - 2446485 - | RNA polymerase sigma-32 factor AFE_2751 2448394 - 2447489 - | cell division protein FtsX, putative TERM 1972 2448303 - 2448359 + g 78 -6.6 -4.59853 | opp_overlap 2448323, overlap 2448304 GCCAGAACGATGGCC AGCGC-GAACACGGTCATGAAGGTGGCC ACA GGCTGCCTG-ATCAGCGTGTTCAGCGCA TTTTTGGCGGCTTCC ftsE 2449062 - 2448391 - | cell division ATP-binding protein FtsE ftsY 2450009 - 2449059 - | signal recognition particle-docking protein FtsY TERM 1973 2450041 - 2450059 + H 74 -4.5 -4.68103 | overlap 2450045 ACCTCTTCGGCGAAC GTTTCCC CCGCA GGGAGGC TTTTGTTACGCTTGA TERM 1974 2450174 - 2450156 - H 79 -11.6 -3.73068 | overlap 2450157 GGCGGAATCGAACAA TGCGCGGG ATG CCCGCGCG CAGCTTGCGGGACGA TERM 1975 2450173 - 2450157 - H 83 -15.1 -2.8352 | overlap 2450156 GCGGAATCGAACAAT GCGCGGG ATG CCCGCGC GCAGCTTGCGGGACG AFE_2754 2450213 - 2450782 + | methyltransferase, putative TERM 1976 2451242 - 2451259 + G 75 -2.6 -4.9725 | opp_overlap 2451194, overlap 2451240 CCAGCCCGTGGTGGC TGCGGC CCTGAA GCGGCA TTTTTGTATCGGCAT coaD 2450775 - 2451299 + | pantetheine-phosphate adenylyltransferase AFE_2757 2451328 - 2451579 + | iron-sulfur cluster-binding protein AFE_2756 2453542 - 2451563 - | hypothetical protein TERM 1977 2452228 - 2452241 + g 70 -3.7 -4.62069 | GCTCTTCAACCGCCT GCCGG AAAA CCGCC TTTTTCCCCTCGAAG mutM 2454371 - 2453559 - | formamidopyrimidine-DNA glycosylase AFE_2759 2455240 - 2454374 - | modification methylase, HemK family TERM 1978 2454752 - 2454736 - G 72 -11.5 -3.32844 | opp_overlap 2454738 CCCGCGACGCCAGAA GCGCACC GTT GGCGCGC GCCACCCGCAACGCC prfA 2456327 - 2455230 - | peptide chain release factor 1 hemA 2457655 - 2456324 - | glutamyl-tRNA reductase TERM 1979 2457382 - 2457372 - GH 70 -6.8 -4.08767 | TCCACGCCGTGAAAA TGGC AGA GCCA GTCCTGCAAGGCCTG AFE_2762 2457560 - 2459371 + | TPR domain protein AFE_2763 2459368 - 2460024 + | outer membrane lipoprotein LolB, putative TERM 1980 2460312 - 2460292 - g 78 -2.4 -5.08824 | overlap 2460293 2460294 TTCGTATGGAAAAAA TCCTGCCC ATGGG GGGCGGCA TTGGGGGTGGTTCCT ispE 2460021 - 2460866 + | 4-diphosphocytidyl-2C-methyl-D-erythritol kinase prsA 2460994 - 2461941 + | ribose-phosphate pyrophosphokinase TERM 1981 2462118 - 2462086 - T 75 -6.3 -4.65916 | opp_overlap 2462090, overlap 2462089 2462090 GCCACCCCAATAAAA CAAGGAGTTAGGCGA TTA TAGCCTAACTCTTTT TCGTTATATTGATTT TERM 1982 2462115 - 2462089 - T 83 -8 -4.43909 | opp_overlap 2462090, overlap 2462086 2462090 ACCCCAATAAAACAA GGAGTTAGGCGA TTA TAGCCTAACTCT TTTTCGTTATATTGA TERM 1983 2462114 - 2462090 - T 74 -11.5 -3.25261 | opp_overlap 2462090, overlap 2462089 2462086 CCCCAATAAAACAAG GAGTTAGGCGA TTA TAGCCTAACTC TTTTTCGTTATATTG TERM 1984 2462090 - 2462114 + T 100 -11.5 -4.99056 | opp_overlap 2462089 2462086 2462090 CCCCAATAAAACAAG GAGTTAGGCGA TTA TAGCCTAACTC TTTTTCGTTATATTG AFE_2768 2462674 - 2462294 - | transposase, degenerate AFE_2769 2464097 - 2462775 - | restriction endonuclease, putative TERM 1985 2463840 - 2463825 - G 74 -11.8 -3.53811 | opp_overlap 2463824 2463821 CGGAGCGGGTCCAAA CCGGGC CACA GCCCGG CTGGTTTCCCCATTT AFE_2771 2464895 - 2464656 - | SpoVT/AbrB like domain protein TERM 1986 2465096 - 2465083 - g 74 -3.7 -4.74103 | overlap 2465084 GGGCCAACCTAAAAA GCCGG TTGG CCGGA CTGATGCCATGGCGC AFE_2772 2465025 - 2465279 + | hypothetical protein yghU 2466445 - 2465564 - | glutathione S-transferase family protein YghU AFE_2774 2466787 - 2466545 - | transposase, degenerate AFE_2775 2467879 - 2467094 - | membrane protein TERM 1987 2467478 - 2467452 - G 100 -11 -4.84359 | opp_overlap 2467452 CCACCGCCATAAAAA TATACCCAAGCA TGG TGTTTGGGTATA TTTTTATGAACCACT TERM 1988 2467452 - 2467478 + g 100 -13.2 -4.83169 | opp_overlap 2467452 CCACCGCCATAAAAA TATACCCAAGCA TGG TGTTTGGGTATA TTTTTATGAACCACT AFE_2776 2469552 - 2467945 - | benzoylformate decarboxylase TERM 1989 2468304 - 2468274 - G 77 -3.3 -4.88736 | gap 1, opp_overlap 2468274 2468277, overlap 2468277 CATCACCGACAAAAA CA-ATCACTGGTCG ATGC CGTCCACTGATCTG TTCGTGCAGTGCTAG TERM 1990 2468300 - 2468277 - G 70 -5.2 -4.5448 | opp_overlap 2468274 2468277, overlap 2468274 CACCGACAAAAACAA TCACTGGTCG ATGC CGTCCACTGA TCTGTTCGTGCAGTG AFE_2777 2470400 - 2469780 - | hypothetical protein AFE_2778 2470734 - 2470432 - | hypothetical protein AFE_2779 2472949 - 2470925 - | copper-translocating P-type ATPase TERM 1991 2473050 - 2473076 + H 72 -2.2 -4.87803 | opp_overlap 2473041, overlap 2473055 2473058 TCAATACCACTTCAG TGTAGTAGGCGG TGT CCACTTATTCCA TTTTCTTTCAGGCTA TERM 1992 2473385 - 2473370 - g 74 -5.4 -4.45117 | gap 1 CACACGGCAAACAAA TGC-CGC GCT GCGAGCA GACTCTTGGCGCTCC AFE_2780 2473228 - 2473620 + | hypothetical protein TERM 1993 2473875 - 2473933 + F 71 -7.3 -4.06182 | gap 2, opp_overlap 2473875 2473889, overlap 2473889 2473910 CGAAAACATGCATAA GCACCTGGAACAAACCCCTGGCGTCGATC CCT GGGCGGCGGCAGAGGT-TGGTCC-GGCGC TGTTTTTCTCGCTGA TERM 1994 2473910 - 2473935 + F 72 -2.4 -4.88736 | opp_overlap 2473889 2473875, overlap 2473889 2473875 GCGTCGATCCCTGGG CGGCGGCAGA GGTTGG TCCGGCGCTG TTTTTCTCGCTGATC AFE_2782 2474158 - 2474520 + | cation efflux system protein, putative AFE_2783 2474645 - 2474953 + | hypothetical protein TERM 1995 2476075 - 2476091 + G 89 -11.5 -4.25104 | opp_overlap 2476065 2476064 CAAAGCCGCACCGGA CCGGGCC TGG GGTCCGG TTTTGATGCGGACGG AFE_2784 2475367 - 2476227 + | hypothetical protein AFE_2785 2477662 - 2476508 - | hypothetical protein AFE_2787 2477769 - 2477861 + | hypothetical protein AFE_2786 2478149 - 2477856 - | transposase, degenerate TERM 1996 2478034 - 2478047 + g 74 -6.7 -4.29738 | CGTACACCCTGATTC TCCAG TCCC CTGGA TTTTACTGCATATGG TERM 1997 2478389 - 2478411 + H 100 -6.3 -5.63517 | gap 1, opp_overlap 2478389 2478382, overlap 2478382 AGATGACAGAAAAGC GGTGCT-CAG ATCT CTGGAGCGCC TTTTTTCTTTGGAGC AFE_2788 2478570 - 2478923 + | hypothetical protein TERM 1998 2478964 - 2478993 + T 78 -2.1 -5.28683 | gap 1, overlap 2478967 TCTTTAACAACTATT CCA-CTGATGCCGA ATT TAGGTATCCGATGG TTTTTTACTATTGGT AFE_2789 2479825 - 2479043 - | hypothetical protein AFE_2790 2483105 - 2480037 - | type I restriction-modification enzyme, R subunit TERM 1999 2480774 - 2480791 + g 73 -10.5 -3.60048 | overlap 2480776 CCACAATGTCGTCGC CGGCGGC TAAA GTCGCCG CTTTTTTGAGGCCGG TERM 2000 2480776 - 2480792 + g 93 -7.9 -5.00616 | overlap 2480774 ACAATGTCGTCGCCG GCGGCTA AAG TCGCCGC TTTTTTGAGGCCGGA TERM 2001 2480871 - 2480895 + g 79 -7.7 -4.4767 | AGACAGAATGAATTC GGTGGCCTTGC GCA GGGTGGCCACC TTTTCTGATCCGTCG TERM 2002 2481014 - 2481051 + g 78 -6.9 -4.63527 | overlap 2481015 CGGTTTCCGCCGGAT TGCCCTTGCCACCGGAA CGGG TGTAGGTGGCAATGGCG TTTTTCAGGTCCTGG AFE_2791 2485131 - 2483875 - | type I restriction-modification system, S subunit TERM 2003 2484306 - 2484295 - G 70 -4.4 -4.47491 | AGACCAAGAAAATAA GATG TCGC CATC ATGCACTATATACTG AFE_2792 2485492 - 2485271 - | hypothetical protein AFE_2793 2487395 - 2485818 - | type I restriction-modification system, M subunit TERM 2004 2486058 - 2486035 - G 71 -8.2 -4.03234 | GCCGCCTTACAGAAA CCGGGAATAT CCGC ATATTCCCCG TCCCCATCGCCGCGC TERM 2005 2487659 - 2487688 + G 83 -2.7 -5.28683 | overlap 2487660 CTGCATAGTCTGTTC GGCGAGTTTCGTG TTAA CACTAAGCGCGCG TTTTTTCGTGTTGAT AFE_2794 2487482 - 2487904 + | hypothetical protein AFE_2795 2488255 - 2488359 + | hypothetical protein AFE_2796 2489286 - 2488606 - | transcriptional regulator, ArsR family AFE_2797 2489396 - 2489806 + | hypothetical protein ogt-1 2489916 - 2490440 + | methylated-DNA--protein-cysteine methyltransferase AFE_2799 2491968 - 2490478 - | transcriptional regulator, Ada family/DNA-3-methyladenine glycosylase II TERM 2006 2492305 - 2492325 + G 74 -11.1 -3.53012 | overlap 2492308 GAAATGACCTTTGGT GACCAGCGC AAG GCGCTGATC TTTGGACAGCAAAAA AFE_2800 2492200 - 2492598 + | glyoxalase family protein AFE_2801 2492595 - 2493338 + | oxidoreductase, short-chain dehydrogenase/reductase family AFE_2802 2493412 - 2493741 + | multidrug resistance protein, SMR family AFE_2803 2493794 - 2494336 + | FMN reductase, NADPH-dependent AFE_2804 2494340 - 2494819 + | hypothetical protein AFE_2805 2494821 - 2495306 + | hypothetical protein TERM 2007 2495883 - 2495866 - g 70 -3.4 -4.66163 | ACCGCCATGGAAAAA CTGCAA AACATA TCGCAG TATCGGAGCCATCCC AFE_2806 2495317 - 2495964 + | hypothetical protein AFE_2807 2495978 - 2496634 + | transcriptional regulator, putative AFE_2808 2496870 - 2496676 - | hypothetical protein AFE_2809 2497018 - 2496917 - | hypothetical protein AFE_2810 2497188 - 2497006 - | hypothetical protein TERM 2008 2497175 - 2497150 - G 100 -20.5 -4.49756 | CGTCAAATACCAAAA GACCCCGCCGA TTCT TCGGCGGGGTC CCATCACAAACAACA TERM 2009 2497191 - 2497217 + r 71 -4.5 -4.59773 | gap 1, opp_overlap 2497191, overlap 2497193 CCATCACAAACAACA GGCG-TGATGAA TTAC TTCATCATCGAC TTTTTGAACATCCGC AFE_2811 2497507 - 2497202 - | lipoprotein, putative AFE_2812 2497762 - 2497661 - | hypothetical protein AFE_2813 2497862 - 2497764 - | hypothetical protein AFE_2814 2497935 - 2498489 + | hypothetical protein pepP 2499861 - 2498521 - | Xaa-Pro aminopeptidase TERM 2010 2499031 - 2498991 - G 73 -10.3 -3.56568 | opp_overlap 2499021 GAACGACTTCGTAAA CTTCCCGTTGTGCGGGGCT GAA AACCCCGTTCACCGGCAAG GTCCTGGTGATGTCT AFE_2816 2500424 - 2499984 - | hypothetical protein radA 2501952 - 2500594 - | DNA repair protein RadA TERM 2011 2500948 - 2500921 - G 85 -5.6 -5.14965 | gap 1 ATCCTGATCAAAAAA CATGCTGTCACCG TGA CGATG-CAGAATG GCCAGAAGGAGGGAA alr 2503043 - 2501949 - | alanine racemase dnaB 2504503 - 2503130 - | replicative DNA helicase TERM 2012 2504482 - 2504456 - G 76 -13.7 -3.06696 | gap 1, opp_overlap 2504456 CTCCGCCTCAATAGA GTGCGGCGGGGC CTTG ACCCCGCCGC-C GTAGTCTGCCGAATC rplI 2504964 - 2504518 - | ribosomal protein L9 AFE_2821 2505583 - 2505002 - | hypothetical protein AFE_2822 2505915 - 2505559 - | hypothetical protein rpS18 2506209 - 2505931 - | ribosomal protein S18 rpsF 2506630 - 2506226 - | ribosomal protein S6 nagZ 2507819 - 2506755 - | beta-hexosaminidase TERM 2013 2507189 - 2507143 - G 73 -10.1 -3.64198 | overlap 2507138 CGGGGATACAGACAA TGCGCGGGCATGATCGCCG GAATTCCGG CGGCGATCAGGGCCGCAAA GGGCTGGAGGTCTTC AFE_2826 2509944 - 2507803 - | hypothetical protein TERM 2014 2509102 - 2509068 - G 78 -10.6 -3.86822 | TAATCGCGCCATAAA GCACGGCATTCAGGGT TTG ACCCTGCTGGCCATGC ACCTGATACATCAGG TERM 2015 2509174 - 2509126 - G 93 -8 -4.88736 | overlap 2509133 CATCAGGTACAAAAA GATCAGACTGCCGGCGACCAAG GACAG CGAGGTCGCCAGCAGGGTCATC GTGCGCTGGCCGGTC TERM 2016 2509167 - 2509133 - G 76 -13.5 -3.07439 | overlap 2509126 TACAAAAAGATCAGA CTGCCGGCGACCAAG GACAG CGAGGTCGCCAGCAG GGTCATCGTGCGCTG AFE_2827 2510499 - 2509945 - | ErfK/YbiS/YcfS/YnhG family protein rumA 2511790 - 2510468 - | 23S rRNA (uracil-5-)-methyltransferase TERM 2017 2511134 - 2511123 - GR 71 -5.8 -4.25104 | overlap 2511124 TGTTGCTCACCAAAA GCAC GCAG GTGC TGCAGATCACTTTCC AFE_2829 2512574 - 2511765 - | hypothetical protein TERM 2018 2512326 - 2512308 - GR 74 -4.5 -4.68506 | overlap 2512309 AATGAACTGGAAAAA GGCCG TGACCAGAG CGGCC TCGTCGTCGTCCACC AFE_2830 2513011 - 2512583 - | hypothetical protein TERM 2019 2512875 - 2512854 - G 74 -6.5 -4.36914 | overlap 2512857 2512858 GCGCCGCTGACAAAA TAAGGGCGC ATCT GCGCCGCTA TCGCCTCGAGCTGCG TERM 2020 2512893 - 2512857 - G 77 -8.6 -4.30995 | gap 1, overlap 2512854 2512858 CCGCTGACAAAATAA GGGCGCATCT-GCGCCG CTAT CGCCTCGAGCTGCGCCC TGGCCGACTGCACTC AFE_2831 2515320 - 2513281 - | hypothetical protein TERM 2021 2514366 - 2514313 - G 79 -8.7 -4.18018 | gap 1 TCCCGCCACGGAAAA CCGCACCTGCCCCGAGGCCT-GCAAC CCG GCCGCCAGACCTCCGGGAAGGGTCAG CGGTTTGATCCAGTT TERM 2022 2514489 - 2514467 - G 71 -6.8 -4.17657 | overlap 2514468 CAGTACAGCGCAAAA CCGCCCTGCC CGA GGCCGGGCCA ACGGAGGCTTCCCTC cysM 2516230 - 2515346 - | cysteine synthase B TERM 2023 2515771 - 2515793 + g 81 -14.2 -3.33261 | overlap 2515740 AGATCTCCGGTCCGG TCCCGAGGTA ATG TGCCTCGGGA TTATCAGGGTTGGAA pgl 2516336 - 2517046 + | 6-phosphogluconolactonase AFE_2834 2518058 - 2517120 - | SPFH/Band 7 domain protein AFE_2835 2518495 - 2518034 - | hypothetical protein TERM 2024 2518372 - 2518351 - G 81 -4.3 -4.88388 | overlap 2518353 2518355 AGAATCCGAGAAAAA CCCAGTGCA GCAC CGCACCCGG CAGGAGCAGCCCGGT glgB 2520709 - 2518511 - | 1,4-alpha-glucan branching enzyme TERM 2025 2519058 - 2519076 + gr 71 -5.9 -4.3739 | opp_overlap 2519056 AGGTTGGCAAAACGC TGCCAGG CATCC CCCGGCA TTTTGTCCAGCAATG AFE_2837 2520866 - 2520663 - | hypothetical protein TERM 2026 2521362 - 2521387 + G 73 -9.1 -3.9009 | overlap 2521364 CCACCGCCCCCGTTT TGTGATCATCC TGGC GGGTGATCATA TTTATAAGATGGATT glgC 2520952 - 2522259 + | glucose-1-phosphate adenylyltransferase AFE_2839 2522265 - 2523971 + | glycosyl hydrolase, family 57 AFE_2840 2523968 - 2525986 + | glycosyl hydrolase, family 57 AFE_2841 2525979 - 2526926 + | ROK family protein TERM 2027 2527339 - 2527318 - g 71 -8 -4.08692 | gap 1 GAACCTGCTGGAAAA CGGGCAGGA ACGCG TCC-GCCCG CTGGCCTGCTCCGGG murI 2526926 - 2527735 + | glutamate racemase AFE_2843 2529040 - 2527748 - | hypothetical protein TERM 2028 2528033 - 2528017 - G 75 -7.9 -4.25104 | overlap 2528018 GCTCGCCCAGGAAAA GGCCCAG TTG CTGGGAC AGACGCTGCACCTGC TERM 2029 2528770 - 2528786 + g 73 -10.8 -3.61398 | opp_overlap 2528759 TGAACTCCGCCAGAC GGCGCG CCAGA CGCGCC TTGTTCCGCGGCAGG TERM 2030 2529232 - 2529245 + G 70 -3.1 -4.62471 | TTTTAGCTATTTTTC TGCCA TTTC TGGTA TTTTTCACCATTGGC AFE_2844 2529207 - 2529395 + | hypothetical protein ssb-1 2530008 - 2529538 - | single-strand binding protein TERM 2031 2530899 - 2530949 + G 81 -4.4 -5.00616 | opp_overlap 2530904, overlap 2530900 2530901 CGCCTCTTCTCTTTC AATAATCCCGCCGGGGCCTGCCCA CGC TGTGACGGCCTCGGCGAGATCACC TTTTTTGACCCCGAC TERM 2032 2530944 - 2530904 - g 82 -13.1 -3.61398 | opp_overlap 2530901 2530900 2530899 CTTCTCTTTCAATAA TCCCGCCGGGGCCTGCCCA CGC TGTGACGGCCTCGGCGAGA TCACCTTTTTTGACC uvrA 2530095 - 2532899 + | excinuclease ABC, A subunit AFE_2846 2533612 - 2532872 - | hypothetical protein TERM 2033 2533980 - 2533966 - g 93 -5.6 -5.47218 | CTTCATCGAAAAAAA CCTGCC GTT GCCAGG TGACGACCTGCGTGT AFE_2848 2533634 - 2534503 + | thioredoxin, putative TERM 2034 2534526 - 2534536 + F 70 -3.2 -4.72127 | GCTAGCCATATCGTC TCTC ATC GAGG TTTTATATGTTATGT TERM 2035 2534562 - 2534577 + F 91 -11.8 -4.08767 | TATGTTGTGATCGCT GGCCGG AACC CCGGCC TTTTCCCGGAGTCCA TERM 2036 2534690 - 2534710 + G 74 -4 -4.78661 | gap 1, opp_overlap 2534692, overlap 2534693 CCCCAAACTGGTAAT CACTGCCGT CGTG GCGGCA-TG TTTTGGTTTTTCACT AFE_2849 2534640 - 2536160 + | serine protease, DO/DeqQ family TERM 2037 2536199 - 2536176 - T 74 -11 -3.17325 | opp_overlap 2536180, overlap 2536174 2536172 2536177 AGGCGCGACAATACA GGCATCACCC GCGC GGGTGATGCT TCGCGTGCAGCGCCT TERM 2038 2536198 - 2536177 - T 81 -14.5 -2.50074 | opp_overlap 2536180, overlap 2536176 2536174 2536172 GGCGCGACAATACAG GCATCACCC GCGC GGGTGATGC TTCGCGTGCAGCGCC xerD 2537088 - 2536180 - | tyrosine recombinase XerD TERM 2039 2536470 - 2536449 - G 77 -3.5 -4.87665 | GCCCAGTCACAAAAA GGGCGGCAC TGAT GCGCTGACC CAGTATCTGCGGGCG AFE_2851 2538348 - 2537140 - | hypothetical protein TERM 2040 2537572 - 2537535 - G 100 -17.7 -3.71873 | gap 1, overlap 2537516 2537536 CGAGCCAGACGTAAA GGCGCAGCAGCGGCAGGG GTT CCTTGCCGCCGCCGC-CC TCGATGATCATCAGG TERM 2041 2537572 - 2537536 - G 86 -17.9 -2.82803 | overlap 2537516 2537535 GAGCCAGACGTAAAG GCGCAGCAGCGGCAGGG GTT CCTTGCCGCCGCCGCCC TCGATGATCATCAGG TERM 2042 2538084 - 2538054 - G 88 -19 -2.62184 | opp_overlap 2538046 CGGCCTCGGACATCA GCGCAGCCGGCAGC ATG GCTGCCGGCTTCAC CAGCGACGTCTCCTG rplS 2538734 - 2538390 - | ribosomal protein L19 trmD 2539500 - 2538757 - | tRNA (guanine-N1)-methyltransferase rimM 2540015 - 2539500 - | 16S rRNA processing protein RimM rpsP 2540259 - 2539999 - | ribosomal protein S16 ffh 2541706 - 2540330 - | signal recognition particle protein arsH 2542526 - 2541813 - | arsenical resistance protein ArsH TERM 2043 2542346 - 2542329 - G 70 -10.5 -3.53012 | TCCCGTCGGGTGAAA GACGCGG GTTT CCGCGCC GAAGTATCGCAGCAG arsB 2543851 - 2542541 - | arsenical pump membrane protein TERM 2044 2543122 - 2543091 - G 76 -14.4 -2.58539 | overlap 2543087 2543083 AACAGGATCAACGCA CCGGTTCCGGTCAC CACG GAGACCGGAACCTG CCATTGCGCAGTGAC arsR 2543945 - 2544301 + | transcriptional regulator, ArsR arsC 2544301 - 2544792 + | arsenate reductase TERM 2045 2545074 - 2545061 - g 75 -2.3 -5.00884 | opp_overlap 2545070, overlap 2545062 ATTTCCCCCAAAAAA CGTGC TCTG GCACT GGTAGTAGTGCTTAT AFE_2861 2545040 - 2546077 + | secretion protein, HlyD family AFE_2862 2546081 - 2547859 + | ABC transporter, ATP-binding protein TERM 2046 2548904 - 2548923 + G 81 -5.6 -4.72986 | TCTGGAACAGTCTGG CGCTGCTG CTGA TGGCGGCG TTTTTCCTCGGCGTC AFE_2863 2547856 - 2548971 + | ABC transporter, permease protein, putative TERM 2047 2549046 - 2549035 - gf 72 -2.2 -4.77165 | gap 1 TGCGGGACAAGAAAA GC-CG TTT CGTGC TCATCGGCCCACCCC TERM 2048 2549416 - 2549458 + GF 100 -18.4 -3.2827 | ATACCCATTGGGCCG CGGACCATCATTGGGGCCGG CCG CCGGCGCAACTGGTGGTCCG TTCCTGGTTCAATCC TERM 2049 2549627 - 2549650 + GF 71 -8.1 -3.78775 | GGGTCCGGTGGAGAT CCTGGTAGG AAAAGC CCTGCCGGG TTTCATCATCGGCGG AFE_2864 2548971 - 2550080 + | ABC transporter, permease protein, putative AFE_2865 2550043 - 2550432 + | hypothetical protein AFE_2866 2550725 - 2550444 - | hypothetical protein AFE_2867 2551216 - 2550953 - | thioredoxin family protein TERM 2050 2551117 - 2551137 + g 84 -3.9 -5.29782 | overlap 2551119 GGTCCATGGGTAATT TTTGTGCGG CTT CTGCCCAGA TTTTTTCTGCCTGTG AFE_2868 2551275 - 2551736 + | hypothetical protein TERM 2051 2551897 - 2551884 - g 81 -8.1 -4.72272 | overlap 2551870 GGCCCGCATCAAAAA GGTGG GCAC CCACC TGGAGGCCGGTCGAC AFE_2869 2551729 - 2552175 + | glycine cleavage system H protein, putative AFE_2870 2552730 - 2552221 - | hypothetical protein AFE_2871 2552845 - 2552735 - | hypothetical protein TERM 2052 2553005 - 2552985 - R 70 -6.7 -4.09173 | overlap 2552978 ACAGAATACCAGAAA GGCCCTCCG ATC CGGGGAACC ACGGAATCCCGTTGC AFE_2872 2553479 - 2553045 - | hypothetical protein TERM 2053 2553629 - 2553641 + r 71 -4.8 -4.56775 | opp_overlap 2553629 TGGATTGTCCAGATA CCTG CTCTC CAGG TTTTTAGGAACCGAT TERM 2054 2554404 - 2554392 - R 74 -4.8 -4.73682 | opp_overlap 2554392 TGTTAGAATACAAAA TGCG AGAGA CGCA ATTCCTGGTGACATT AFE_2873 2555226 - 2555038 - | hypothetical protein TERM 2055 2555125 - 2555147 + g 72 -2 -4.76423 | AACGCTGTCGCATTC CCAACCTT CATAGCA AAGGTTTG TTTTATATGTTTGTG AFE_2874 2555601 - 2555494 - | hypothetical protein AFE_2875 2556551 - 2555628 - | transcriptional regulator, LysR family TERM 2056 2556957 - 2556927 - g 90 -5.4 -5.24129 | opp_overlap 2556915, overlap 2556931 GTTGCTTAGAAAAAA GCTATCTATTGGCA TAA CGCCAATAGGGAAC CCAGCTATGCCCATG AFE_2876 2556664 - 2557287 + | hypothetical protein TERM 2057 2557918 - 2557907 - f 79 -7.2 -4.3898 | overlap 2557909 ATGAGGTCTATAAAA GGGC AGAC GCCC GCAGTGTCACTTAGT AFE_2878 2558049 - 2558165 + | hypothetical protein AFE_2877 2560263 - 2558152 - | hypothetical protein TERM 2058 2559068 - 2559079 + g 77 -3.6 -5.00884 | GCAATTCTGGAGAGC GGGG CGAA CCTC TTTTTTGACCGAGCT AFE_2879 2561024 - 2560260 - | hypothetical protein TERM 2059 2560428 - 2560413 - G 70 -4.6 -4.57073 | CATCGGTGTGAAAAA TGCGGC TGAC GCTGCA CCGGTAACGCTGTCG AFE_2880 2561708 - 2561031 - | von Willebrand factor type A domain protein AFE_2882 2563726 - 2562800 - | uracil-DNA glycosylase family 4 protein TERM 2060 2563622 - 2563568 - G 79 -9.2 -4.15044 | gap 1, opp_overlap 2563615, overlap 2563553 2563569 GGGCGTCGGAACAAA CTCCGACGCTGATGGCGCAG-GTAC AGATCG GTTCGCTGCGGCATCAGCGGCGGTT GCCGTCGTTTTGGCC TERM 2061 2563621 - 2563569 - G 72 -12.7 -3.08812 | gap 1, opp_overlap 2563615, overlap 2563553 2563568 GGCGTCGGAACAAAC TCCGACGCTGATGGCGCAG-GTAC AGATCG GTTCGCTGCGGCATCAGCGGCGGT TGCCGTCGTTTTGGC TERM 2062 2563615 - 2563629 + g 76 -9.2 -4.13767 | opp_overlap 2563569 2563568 TCGCTGCGGCATCAG CGGCGG TTG CCGTCG TTTTGGCCTGCGCCA AFE_2883 2563893 - 2564963 + | choloylglycine hydrolase, putative AFE_2884 2565123 - 2564977 - | hypothetical protein AFE_2885 2565559 - 2565176 - | PemK family protein AFE_2886 2565807 - 2565556 - | PemI family protein TERM 2063 2566022 - 2565998 - g 84 -10.7 -4.19817 | opp_overlap 2565997 2565998 GTTAGTCATCCAAAA GCCAACGCAGA AAA CCCGCATTGGC CTTGTTACGACGCGG TERM 2064 2566409 - 2566397 - g 77 -3.4 -5.00616 | opp_overlap 2566397 TTCGTCGGCAAAAAA CATG CATGC CATG TTTCTCTCTATCAGG AFE_2887 2565965 - 2566708 + | hypothetical protein AFE_2888 2567227 - 2566811 - | PIN domain protein AFE_2889 2567447 - 2567214 - | transcriptional regulator, AbrB family TERM 2065 2567578 - 2567554 - gH 100 -7.2 -5.53991 | gap 1, opp_overlap 2567554 CACCCACCAAAAAAA GCCAACGC-AG AAAA CTCGCATTGGC CTTGTTACGACGCGG AFE_2890 2567446 - 2567706 + | hypothetical protein AFE_2891 2567803 - 2568153 + | hypothetical protein TERM 2066 2569539 - 2569519 - g 85 -12.5 -3.72576 | opp_overlap 2569521 2569526 2569528 2569530 CGGGGGCTGATCAAA GCGCTCTCC GGC GGCGAGCGC GCACGTTTGCTGCTG AFE_2893 2568250 - 2570112 + | ABC transporter, ATP-binding protein TERM 2067 2570103 - 2570088 - T 75 -6 -4.63218 | opp_overlap 2570088, overlap 2570090 GGCGCTGGAAGAAAA GGCGGC CCGG GCTGCC GACTTTTAGGAAGAA AFE_2892 2570411 - 2570109 - | hypothetical protein AFE_2894 2570688 - 2570425 - | hypothetical protein AFE_2895 2572487 - 2570733 - | peptidoglycan synthetase FtsI , putative TERM 2068 2570774 - 2570784 + g 74 -3.2 -4.86731 | overlap 2570747 TTTCCGCCTGGGTGG CCGT GAT ATGG TTTTCTTTGGAGGCA TERM 2069 2571519 - 2571504 - G 81 -8.2 -4.66537 | overlap 2571506 GTCGCGAATACAAAA CCCGCC CACG GGCAGG CAGTGGGAGACGTTA AFE_2896 2574696 - 2572636 - | O-antigen polymerase family protein TERM 2070 2573270 - 2573284 + g 75 -7.8 -4.18018 | opp_overlap 2573269 GCGTTGCTGATCAAC CGGTTG AGC CAGCCG TTTTCGCTCAGCAGG TERM 2071 2573552 - 2573532 - G 73 -4.6 -4.66833 | CGGTAACGGCAAAAA CCCCGAGC ACCAG ACCCAGGG CCTGCAAGCGGCGTT TERM 2072 2573679 - 2573641 - G 74 -11.8 -3.53224 | gap 1, overlap 2573653 CAGGGTCGCGGCAAA GCCGAGGAGAAAGCCCA GATTGA TGAGCCCTC-CCTCGGC CAGATATTCCAGGTA AFE_2897 2574926 - 2574693 - | hypothetical protein TERM 2073 2575002 - 2574985 - R 95 -9.8 -4.7254 | opp_overlap 2574985 AGTCCTTATGAAAAA GGCCCG ACAATG CGGGCC TTTCCTCAATTGGTC TERM 2074 2574985 - 2575002 + r 76 -9.8 -3.80114 | opp_overlap 2574985 AGTCCTTATGAAAAA GGCCCG ACAATG CGGGCC TTTCCTCAATTGGTC ispB 2576068 - 2575100 - | octaprenyl-diphosphate synthase AFE_2900 2577133 - 2576177 - | hypothetical protein ntrC 2578629 - 2577223 - | nitrogen regulation protein NR(I) ntrB 2579711 - 2578626 - | nitrogen regulation protein NR(II) TERM 2075 2578811 - 2578794 - G 70 -3.4 -4.60487 | opp_overlap 2578807 2578808, overlap 2578810 GACCAGGGGCAAAAA GATCCG TGGCAG CAGATC CGGGGAGATTCCCGG AFE_2903 2580021 - 2580791 + | hypothetical protein AFE_2904 2580788 - 2580985 + | hypothetical protein AFE_2905 2581107 - 2582570 + | hypothetical protein TERM 2076 2582755 - 2582767 + G 76 -9.1 -4.05446 | opp_overlap 2582753 CACGCCGGAGGAAGG CCGCA TCA TGCGG TTTCTCATTGCCGAC TERM 2077 2583161 - 2583135 - g 70 -4.4 -4.52857 | gap 1, opp_overlap 2583135 2583139, overlap 2583139 AGGGGCTACAGAAAA CGACCA-CCAG CAGCCT CTGGCTGGGCG TGTTGCGTGCGCTCA AFE_2906 2582555 - 2583541 + | hypothetical protein TERM 2078 2585241 - 2585221 - g 77 -3.1 -4.87786 | overlap 2585223 CGAAGCCCACAAAAA GTGGCAGCC GGA GACTGACCC CTTCGCGCCCATGCC TERM 2079 2586094 - 2586144 + G 78 -9.8 -3.85698 | gap 2, opp_overlap 2586119 CGAGATGCCGCCCCA CGCACGCATGAGCCTCGCGCAGCA ACTGC TGGTGCGC-AGCCTCTTGC-TGCG TTTCTGGGAAACCCC TERM 2080 2586785 - 2586827 + G 79 -9.7 -4.25104 | ACCGGCCACAGTCAG GGCCCGCATCCGGAGCC AATCCTGCA GGGTCCGGGCGCGAGCC TTTTCGTGCCAACCG AFE_2907 2583581 - 2586943 + | transglutaminase-like domain protein TERM 2081 2587027 - 2587043 + T 100 -10.8 -5.55664 | CTCAAGTGGCTTCCA GGGCGG TTATT CCGCCC TTTTTTTCGTCCTCA AFE_2908 2587233 - 2587096 - | hypothetical protein TERM 2082 2587162 - 2587142 - G 73 -8.9 -3.93695 | TCTACCAGGGAGAAA GCACCCGTG CTG CACTGGCGC ACCCCCAGGATCTGC TERM 2083 2589297 - 2589284 - g 75 -8.1 -4.2349 | opp_overlap 2589288 GGGCTACACCGAAAA GCAGG TACG CCTGC TGGTGGACTGGTATA AFE_2910 2587401 - 2589335 + | hypothetical protein AFE_2909 2589466 - 2589332 - | hypothetical protein TERM 2084 2589396 - 2589411 + g 100 -11.8 -5.40072 | CTCTCCCGATATCCT GCCCGC ACCC GCGGGC TTTTTTTGACCGGGA TERM 2085 2590537 - 2590547 + G 77 -8.2 -4.37092 | CTGGTCGCCATTACC CCCG CCT CGGG TTTTGTCGGCCCCAT amt-2 2589616 - 2590932 + | ammonium transporter AFE_2912 2591034 - 2592338 + | hypothetical protein TERM 2086 2592415 - 2592398 - g 71 -6.9 -4.20516 | overlap 2592399 CGGTCACCGAAGAAA TTGCGGC CATC GCCGCAG ATGAACTTCAGCTCG TERM 2087 2593070 - 2593053 - g 88 -3.3 -5.47218 | overlap 2593054 TTTCATCGAAAAAAA CGCCCCA CACC TGGAGGG CTGGAAGCGGGAAAT AFE_2913 2592331 - 2593806 + | SpoVR like family protein TERM 2088 2595041 - 2595053 + G 74 -5.5 -4.46073 | GACGGCGGCTTTTTC GCTCG GGC TGAGC TTTCTTATGTTACCG AFE_2914 2593988 - 2595160 + | hypothetical protein TERM 2089 2595462 - 2595451 - g 76 -5.8 -4.68424 | overlap 2595453 GAAGCCATCGAAAAA GGTG CCCG CACC GGCAAGATTGGTGAC glnK-1 2595214 - 2595552 + | nitrogen regulatory protein P-II 2 amt-1 2595607 - 2596911 + | ammonium transporter TERM 2090 2596940 - 2596969 + F 100 -20.9 -2.82834 | opp_overlap 2596945, overlap 2596942 2596945 ACACCCCTACGGTCA TACAACACGGCGG GCAA CCGCCGTGTTGTA TGTCATCATGGCATA TERM 2091 2596942 - 2596967 + F 100 -19.1 -2.96216 | opp_overlap 2596945, overlap 2596940 2596945 ACCCCTACGGTCATA CAACACGGCGG GCAA CCGCCGTGTTG TATGTCATCATGGCA TERM 2092 2596945 - 2596964 + F 95 -15 -3.62616 | opp_overlap 2596945, overlap 2596942 2596940 CCTACGGTCATACAA CACGGCGG GCAA CCGCCGTG TTGTATGTCATCATG TERM 2093 2596964 - 2596945 - f 95 -15 -3.49475 | opp_overlap 2596945 2596942 2596940 CCTACGGTCATACAA CACGGCGG GCAA CCGCCGTG TTGTATGTCATCATG AFE_2917 2597010 - 2597723 + | glutamine amidotransferase class-I domain protein AFE_2918 2598114 - 2597728 - | lipoprotein, putative AFE_2919 2598362 - 2598733 + | lipoprotein, putative TERM 2094 2598871 - 2598853 - f 79 -7.4 -4.4648 | ATCTCCACGATAAAA CCGATATG GCC CATAGCGG TAGAAGTCCCGGCAG AFE_2921 2599051 - 2600136 + | rare lipoprotein A, putative AFE_2920 2600416 - 2600117 - | hypothetical protein AFE_2922 2601648 - 2600422 - | cation channel protein, putative TERM 2095 2601636 - 2601625 - G 84 -3.6 -5.17576 | overlap 2601616 2601626 CACGAAGCGAAAAAA CCGC TGTC GCAG TGACCATCTCATCAC TERM 2096 2601792 - 2601807 + r 73 -5.4 -4.54727 | gap 1 CCTGTGCATGCCGGC GC-GACG AAC CGTCAGC TTTTGATTTCCAGGG AFE_2923 2603019 - 2601850 - | D-alanyl-D-alanine carboxypeptidase TERM 2097 2602707 - 2602687 - G 75 -8.3 -4.15044 | GTGGGGTTGAATAAA CATGCGC GAACCCT GCGCATG CCAGGCCTCGTTGGA pgi 2604750 - 2603131 - | glucose-6-phosphate isomerase TERM 2098 2604622 - 2604612 - G 71 -8.2 -4.10781 | overlap 2604613 AATAATCGAGATAAA GGCC GCA GGCC TCGGCGGAAAAATTC TERM 2099 2606117 - 2606144 + G 70 -4 -4.61231 | GAAGACATTGTTCCT GCTGGTCTGGGC GGCA GCGTGGATCGGC TTTTTCACCCTCTCC TERM 2100 2606400 - 2606455 + G 82 -12.2 -3.57144 | CCTTATCTGCTGGCT GCGGCCGGCGCCGGCGCCCTGCTCTG GCAC CGGCGCTGGGTGCCGGCATGGGCGAC TTTGGGCGTCGGCGG AFE_2925 2605194 - 2606885 + | dolichyl-phosphate-mannose-protein mannosyltransferase family protein AFE_2926 2606999 - 2607376 + | crcB protein, putative AFE_2927 2607387 - 2607704 + | hypothetical protein TERM 2101 2607898 - 2607935 + G 82 -9.2 -4.4009 | gap 2, opp_overlap 2607917, overlap 2607898 GCTTTTGTTTCTACC GG-GTCTGGGGC-GTGGA AGAG TCCACCGCACCGGACACC TTTTATGCCGTCGCC TERM 2102 2608189 - 2608157 - g 100 -9.2 -4.8667 | gap 2, overlap 2608159 CACAGGCCATAAAAA TG-CAG-CCAGCAGCG AGA CGCTGCGGGACTGGCA GCGCTGCGTCCAACT AFE_2928 2607813 - 2608676 + | hypothetical protein cfa 2608778 - 2610037 + | cyclopropane-fatty-acyl-phospholipid synthase TERM 2103 2610451 - 2610464 + G 88 -6.7 -4.87665 | CGCTCCTACCGAACT GTACG GCGT CGTAC TTTTTATGGCTGCCG AFE_2930 2610131 - 2610712 + | hypothetical protein TERM 2104 2611049 - 2611063 + G 84 -9.2 -4.52589 | TGCCGCGGTGCGCGT CGCCCT GCC GGGGCG TTTTCTCTGGGAAAG TERM 2105 2611291 - 2611261 - g 70 -10.4 -3.53091 | opp_overlap 2611271 2611287 2611289 AGCGGCGCTGGCAAA TGGCCGCGCAGATC GCC GATCTGTTCGACCA GTATCAGGTCTATCG TERM 2106 2613320 - 2613347 + G 85 -6.2 -5.0538 | gap 1, opp_overlap 2613319, overlap 2613322 CCCCGCCGAGATCAC CCCCCGCAGCATC CGC GA-GCTGCTGGAG TTTTTTCGCCTGCCC TERM 2107 2613514 - 2613503 - g 85 -3.6 -5.40072 | CGCCGCGGAAAAAAA CGGC CCTG ACCG GATTGCCGAAAGGGT recC 2610843 - 2614235 + | exodeoxyribonuclease V, gamma subunit TERM 2108 2615418 - 2615388 - g 74 -5.3 -4.46926 | gap 1, overlap 2615390 TACTGCACGACAAAA CCCAGG-GACCGGC ACTC GCCGCCCGCCTGCG GCAGAAATATCCCGC recB 2614232 - 2617828 + | exodeoxyribonuclease V, beta subunit TERM 2109 2619091 - 2619065 - g 73 -10.8 -3.57144 | overlap 2619066 GCGGCCACCCCGAAA CCGCCGTCCGCA TCC TGCAAACGGCGC ACACTGGCACTCTCG TERM 2110 2619090 - 2619066 - g 77 -14.3 -2.74144 | overlap 2619065 CGGCCACCCCGAAAC CGCCGTCCGCA TCC TGCAAACGGCG CACACTGGCACTCTC recD 2617837 - 2619777 + | exodeoxyribonuclease V, alpha subunit TERM 2111 2620454 - 2620442 - g 70 -4.7 -4.49556 | overlap 2620438 2620443 CCGCGAGGAAACAAA CGCCG TAG CGGCT CTGGAAGTAGGTGCA AFE_2934 2620110 - 2620874 + | transcriptional regulator, putative AFE_2935 2620987 - 2623392 + | TonB-dependent receptor TERM 2112 2623415 - 2623441 + F 100 -13 -4.80396 | opp_overlap 2623406, overlap 2623411 2623409 AAGTAACGCGGTTCG CCGGGGCGAG TCATTCC TTCGCCCCGG TTTTTAAATGTTTTA AFE_2936 2623588 - 2625240 + | hypothetical protein AFE_2938 2627310 - 2626963 - | ISAfe4, transposase orf2 AFE_2939 2627633 - 2627301 - | ISAfe4, tranposase orf1 AFE_2940 2627701 - 2628435 + | TonB-dependent receptor domain protein TERM 2113 2628443 - 2628470 + F 86 -12.7 -3.65351 | overlap 2628444 AGTTCTAAGACGTTT TCGCGCTGCGT AGGGTC ACGCAGCGCGC TTTCCGTGGCAATCG TERM 2114 2628444 - 2628469 + F 90 -16.2 -2.78996 | overlap 2628443 GTTCTAAGACGTTTT CGCGCTGCGT AGGGTC ACGCAGCGCG CTTTCCGTGGCAATC AFE_2942 2628629 - 2629207 + | hypothetical protein AFE_2941 2629293 - 2629162 - | hypothetical protein AFE_2943 2629355 - 2629639 + | hypothetical protein AFE_2944 2632577 - 2630001 - | cation transporting P-type ATPase TERM 2115 2631106 - 2631096 - G 78 -6.8 -4.65895 | TGGCGGATCGAAAAA GCCT ACC AGGC CAAGAAATCTGAAAT msrB 2633151 - 2632726 - | methionine-R-sulfoxide reductase msrA 2633753 - 2633157 - | peptide-methionine (S)-S-oxide reductase TERM 2116 2633831 - 2633849 + H 73 -8.8 -3.81951 | opp_overlap 2633818, overlap 2633827 ACCATCGGCGGGCAA TGTGCCAG ACT CCGGCACA TTTGCTAGTATCCAC TERM 2117 2634417 - 2634403 - g 76 -5.6 -4.62783 | overlap 2634404 GAGGCATTGCAAAAA CCCGTC GCC GACGGT CAACTTCGAGTAAAG AFE_2947 2633905 - 2634813 + | thiol:disulfide interchange protein DsbG, putative nadD 2634873 - 2635529 + | nicotinate (nicotinamide) nucleotide adenylyltransferase AFE_2949 2635553 - 2635909 + | iojap-related protein AFE_2950 2635916 - 2636389 + | hypothetical protein AFE_2951 2636403 - 2636834 + | lipoprotein, putative TERM 2118 2637134 - 2637119 - g 71 -6.8 -4.17762 | CAGGCTGCAAAACAA GACCGC CTCA GCAGTC TGCAACGCCAGGTAC AFE_2952 2636834 - 2637712 + | hypothetical protein TERM 2119 2637890 - 2637865 - g 80 -11.1 -3.83026 | CTTGCCCACAGCAAA GGCCTTGCTGC CGCG ACGGCAAGGCC CGAAGCCGTCATCCT TERM 2120 2638218 - 2638228 + G 79 -8.2 -4.56597 | overlap 2638210 CTACAGCGGCGTCAT GGGG CTG CCCC TTTTTGAAACGGCAG maf-1 2637709 - 2638296 + | maf protein AFE_2954 2638293 - 2639783 + | ribonuclease, Rne/Rng family AFE_2955 2641182 - 2639809 - | sigma-54 dependent DNA-binding response regulator, putative TERM 2121 2640492 - 2640474 - G 72 -2.3 -4.82901 | gap 1 TTTCGTCCAGAAAAA GCGTGCCG CCCT CCGC-CGC CTGGAACAGGCCCTG AFE_2956 2641653 - 2641189 - | hypothetical protein AFE_2957 2643001 - 2641481 - | sensor histidine kinase TERM 2122 2642639 - 2642623 - GH 72 -12.3 -2.64616 | CCCCCAGGGATACCA GCGGCAA TAG TTGCCGC GCGTGAGTCAGATGC TERM 2123 2643149 - 2643127 - gR 100 -14.1 -4.7497 | CCGATCCAGCAAAAA GCCCGGGGA TTAAC CCCCCGGGC TTGAACATCAGAACT TERM 2124 2643517 - 2643539 + Gr 75 -5.7 -4.56597 | gap 1, opp_overlap 2643509 2643516 2643519 GGCATAAGCATAAGT CATGC-CATA TAGC TATGTGCATG TTTTTCAGCCAAAAC AFE_2958 2643000 - 2643635 + | hypothetical protein AFE_2959 2644005 - 2643724 - | hypothetical protein TERM 2125 2644106 - 2644083 - H 70 -8.8 -3.71848 | gap 1 GTCGCTCAGGAATAA GCCGC-ACGGC ATG GCCGCAGCAGC AGCGCATATAAAAGC TERM 2126 2644236 - 2644210 - H 89 -9.4 -4.60487 | overlap 2644212 CACCAGGGCGAAAAA GCCGGTTCGTTC AGC GAACCAACCGCC AGCCAGAAAGGATGT AFE_2960 2644457 - 2645929 + | mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase TERM 2127 2646780 - 2646766 - g 77 -3.5 -4.93365 | GTGGACAAGGAAAAA GCCAA GGTAG TCGGC GGAAAAAGCTCCCTG AFE_2961 2645950 - 2647065 + | capsule polysaccharide export inner-membrane protein TERM 2128 2647456 - 2647423 - g 100 -8.8 -4.88918 | opp_overlap 2647429 2647452, overlap 2647431 CCACGCTAAACAAAA CGACAAAACCCGGC GAACAG GCCGGGCCTCGTTG GCACCAGAAGGAACC TERM 2129 2647448 - 2647431 - g 89 -9.8 -4.71401 | opp_overlap 2647429, overlap 2647423 AACAAAACGACAAAA CCCGGC GAACAG GCCGGG CCTCGTTGGCACCAG TERM 2130 2648018 - 2648036 + G 76 -5.9 -4.60255 | overlap 2648032 TATCTTGTATCTCAT GCTGCCG TTTTC TGGCGGC TTTTTCCCCGCTTAT ctrC 2647404 - 2648249 + | capsule polysaccharide exporter, inner-membrane protein CtrC TERM 2131 2648774 - 2648755 - g 75 -7.8 -4.17425 | opp_overlap 2648752 AGAATTATTTGAAAA TCGTGGCG ATCG CGCCATGA TCATCGTCTCCCATC ctrD 2648246 - 2648899 + | capsule polysaccharide exporter, ATP-binding protein AFE_2964 2648991 - 2649740 + | methyltransferase, FkbM family domain protein AFE_2965 2649792 - 2650433 + | hypothetical protein AFE_2966 2650382 - 2650552 + | hypothetical protein TERM 2132 2651388 - 2651404 + GF 74 -6.5 -4.27584 | CGCCTGTTCGTTTTT CCATCGT GGC ACGAAGG TTTTGGGTTGCCGGT TERM 2133 2652996 - 2653014 + GF 73 -5.2 -4.56597 | GATATTACACAGGTT GCTGAACG CTC TGTGCAGC TTTTTCCCCCGCCCC AFE_2967 2650455 - 2656202 + | glycosyl transferase, group 1 TERM 2134 2656278 - 2656264 - f 84 -5.7 -5.03715 | opp_overlap 2656264 ACCATTTGGAAAAAA CTGCT GGCCA AGCAG TTAATGACTGGATGG TERM 2135 2657463 - 2657478 + G 70 -3.2 -4.62069 | opp_overlap 2657463 GTAGAGAAACAGAAT TCAGGG AGTA CCCTTA TTTTTCCGGTGCAAA AFE_2968 2656290 - 2657861 + | hypothetical protein AFE_2969 2657861 - 2658676 + | hypothetical protein TERM 2136 2659299 - 2659289 - g 73 -4.6 -4.62069 | opp_overlap 2659296 CTGGGAGCCGAAAAA CCAG CGT CCGG AGCTCTGGTCTCTAT TERM 2137 2659526 - 2659553 + G 83 -17 -2.63596 | CGAGGTGCCCGAGAT GCGCAGGGTGCG CTTC CGCACCCTGGGC TGCTATCCCCTCACC cysD-1 2658831 - 2659712 + | sulfate adenylyltransferase, small subunit cysNC 2659712 - 2661526 + | sulfate adenylate transferase, large subunit/adenylylsulfate kinase AFE_2972 2662822 - 2661596 - | ISAfe3, transposase TERM 2138 2663322 - 2663332 + G 85 -6.8 -4.82901 | TTCATGCCCTTTATC CGGA GAT TCCG TTTTTGTCGGAAGAG TERM 2139 2663900 - 2663888 - g 95 -4.9 -5.62045 | ATATATAACAAAAAA GATTT ATT AAATC CCTATTTTGTTGTTG cysQ 2663162 - 2663998 + | 3'(2'),5'-bisphosphate nucleotidase AFE_2974 2663976 - 2665733 + | hypothetical protein TERM 2140 2666313 - 2666287 - g 78 -6.6 -4.60924 | gap 1, opp_overlap 2666308, overlap 2666277 2666304 GAAATCCGGCAAAAA CTGCGGGGTCA AGCCAA CGACCC-GCAG GTGGTGGTGAGTTTG AFE_2975 2665813 - 2666985 + | capsule polysaccharide export protein, BexD/CtrA/VexA family TERM 2141 2667266 - 2667294 + G 78 -13.2 -3.18728 | GCCTGGCTGGCGAGG CTTCCCTTGCGC CCCGT GCCCAAGGGAAG TTGGGTATTGAACAT TERM 2142 2668094 - 2668104 + G 72 -2.4 -4.84359 | opp_overlap 2668056, overlap 2668051 2668068 CAGGGGCAACTGGAG CGCC TGC GGCA TTTTTCTCCCCCTAC AFE_2976 2666999 - 2668168 + | glycosyl transferase, group 1 gmd-1 2668314 - 2669333 + | GDP-mannose 4,6-dehydratase AFE_2978 2669424 - 2670116 + | hypothetical protein TERM 2143 2670684 - 2670669 - g 79 -9 -4.25104 | TCTCGCGCACCAAAA TCCTGC GGTT GCAGGA GTCATCGGAGCTAGC TERM 2144 2670796 - 2670777 - g 74 -6.4 -4.36914 | opp_overlap 2670795 TCGTTGCCCAGAAAA CAGCTTCT GCAG AGGAGCTG GCGCACTTCAGCGCG TERM 2145 2670931 - 2670916 - g 95 -11.8 -4.56597 | GCCTCCGCGCAAAAA GGCGGC AAGC GCCGCC CCCAAAAAATAGAGG AFE_2979 2670125 - 2670943 + | WbbD domain protein AFE_2980 2670987 - 2671283 + | hypothetical protein TERM 2146 2671301 - 2671331 + G 91 -8.2 -4.84359 | opp_overlap 2671295, overlap 2671295 TCCCAGATAGCCCCA TGCGCCAGGGGC AACTGGA GCGCCTGGGGCA TTTTTCTCCCCCTAC AFE_2981 2671270 - 2671395 + | hypothetical protein AFE_2982 2671392 - 2671529 + | hypothetical protein AFE_2983 2671682 - 2671924 + | prevent-host-death family protein AFE_2984 2671924 - 2672376 + | PIN domain protein AFE_2985 2674357 - 2672501 - | ABC transporter, permease/ATP-binding protein AFE_2986 2674856 - 2674419 - | acetyltransferase, GNAT family AFE_2987 2676511 - 2674880 - | peptide ABC transporter, periplasmic peptide-binding protein TERM 2147 2675983 - 2675951 - G 72 -12.8 -3.09878 | TGTATCTATGGAATA GTGTTTCCAGCGCC AGGCG GGCACTGGAAACAA CTGAGACAATCCATT AFE_2988 2677628 - 2676618 - | peptide ABC transporter, ATP-binding protein AFE_2989 2678626 - 2677625 - | peptide ABC transporter, ATP-binding protein TERM 2148 2677883 - 2677872 - G 93 -5.8 -5.55664 | GGAGCAGTAAAAAAA GCCT CTGC AGGC CCCTGCTCCACCGTC AFE_2990 2679584 - 2678694 - | peptide ABC transporter, permease protein TERM 2149 2678772 - 2678762 - G 72 -2.4 -4.8543 | CAATCGCCAGAAAAA TGGC CAC GCCG GGAAAAACAATCAGC TERM 2150 2679009 - 2678983 - G 77 -3.7 -4.96848 | overlap 2678984 2678985 2678997 CGGGCGATATAAAAA GTGCTGGCC-CCA AAC TGGCGGGCAGC-C AGGACATAGTCACGT AFE_2991 2680557 - 2679598 - | peptide ABC transporter, permease protein AFE_2992 2682099 - 2680603 - | peptide ABC transporter, periplasmic peptide-binding protein TERM 2151 2680661 - 2680643 - G 72 -3 -4.84017 | overlap 2680632 AACTGTGGATAAAAA CCACCTCC CGG AGTGATGG CATGGCTAACACCAT AFE_2993 2684084 - 2682243 - | hypothetical protein AFE_2994 2686020 - 2684077 - | hypothetical protein AFE_2995 2686244 - 2686026 - | hypothetical protein AFE_2996 2686681 - 2686541 - | hypothetical protein AFE_2997 2687013 - 2686867 - | hypothetical protein TERM 2152 2687691 - 2687703 + GH 74 -3.3 -4.78848 | overlap 2687692 2687700 TTCAAAATACGCCCG CCCGT TAT ACGGA TTTTCTGTTTACCGC AFE_2998 2687000 - 2689399 + | TonB-dependent receptor TERM 2153 2689426 - 2689452 + FH 74 -10.9 -3.57144 | gap 1, overlap 2689430 AGTGCACCATATTCA TG-GACCCGGGC GATT GCCCGGGTTACA TTTCAGAATACCCGA TERM 2154 2689430 - 2689447 + FH 95 -14.1 -3.28001 | overlap 2689426 CACCATATTCATGGA CCCGGGC GATT GCCCGGG TTACATTTCAGAATA AFE_2999 2689481 - 2690113 + | integral membrane protein, MarC family TERM 2155 2690907 - 2690917 + G 76 -5.4 -4.7153 | opp_overlap 2690907 CCGATGTCAGAATCA TGGT AGG ACCA TTTTTGACGTTGTTT AFE_3000 2690132 - 2691199 + | lactate/malate dehydrogenase family protein AFE_3001 2691187 - 2691459 + | ACT domain protein AFE_3002 2691531 - 2692226 + | TonB family protein AFE_3003 2692264 - 2692911 + | MotA/TolQ/ExbB proton channel family protein AFE_3004 2692943 - 2693341 + | biopolymer transport protein, ExbD/TolR family TERM 2156 2693487 - 2693462 - g 70 -3.9 -4.68545 | gap 1, opp_overlap 2693476, overlap 2693463 2693464 ATGCAAGAGACAAAA TGGGC-CAGGGG AGC CCCCTCCGCCGA GAGGTTTGTGAAAGG AFE_3005 2693374 - 2693856 + | acetyltransferase, GNAT family AFE_3006 2693961 - 2694062 + | hypothetical protein AFE_3007 2694348 - 2694130 - | hypothetical protein TERM 2157 2694276 - 2694257 - Gf 83 -10 -4.07687 | gap 1, overlap 2694258 AGCCTCCGCGCAAAA GGGCGGCAG GCA CTGCC-CCC AAAAAATAATAGAGG TERM 2158 2695847 - 2695870 + GH 78 -6.6 -4.56597 | CGCTACCTGCCCGAA CGCATCCTGC CCCG GTGGGAAGCG TTTTTGCGGGGAGCG AFE_3008 2694332 - 2695906 + | glycosyl transferase, group 1 AFE_3009 2695985 - 2696131 + | hypothetical protein TERM 2159 2696159 - 2696144 - g 90 -4.6 -5.42514 | overlap 2696146 TGAGAAACCAAAAAA TTGCCG TCAT CGGCTA CGCCTCACGCTTGCC TERM 2160 2696340 - 2696352 + G 80 -3.3 -5.12707 | overlap 2696309 2696308 GGGGGACGTAGCGGG CTTCG ACG CGGGG TTTTTTCGCATTTCG TERM 2161 2697579 - 2697607 + G 77 -3.2 -5.00616 | gap 2 GTATCAGGCCACTTT TCGC-CGG-GAC TGGCTGC GTCACCGAGCGA TTTTTTGGCACGAGG TERM 2162 2697714 - 2697724 + G 72 -2.4 -4.74706 | opp_overlap 2697678, overlap 2697707 CGCCCTGGCAGATCC CCAG GGT CCGG TTTTTGCGTATTCCG TERM 2163 2697802 - 2697822 + G 85 -5.4 -5.12068 | overlap 2697804 CCGATATTCCGACAG GCCATCGA AGAGA TCGATGCC TTTTTCTTCCCTCTG TERM 2164 2697901 - 2697919 + G 76 -5.8 -4.62069 | CGCTATGCCCTGACC GGGCATGC CCA GCCGGCCC TTTTTGCCCTGCAGG TERM 2165 2700919 - 2700948 + G 74 -12.1 -3.14132 | gap 1 TTCCCCGGACTCTTT CCGGCCC-CGGACG AGA TGTCCGTGGGCCGC TTGCTGGGGGAGCAA TERM 2166 2702478 - 2702435 - g 74 -11.1 -3.53012 | gap 3, opp_overlap 2702437 GTTTTGGTCTGGAAA CGGCACGACGCCTGGCGGAGCG CGG CGC-CCGC-AAGC-TCGTGCTG ATCTCGCGATCCGGC AFE_3010 2696128 - 2703588 + | polyketide synthase, type I, putative TERM 2167 2704528 - 2704540 + G 84 -5.5 -4.9792 | CGAAAACCTGCGTTA TCTGG CCC CCGGA TTTTTGTATAGCGTC TERM 2168 2704819 - 2704837 + G 95 -6.7 -5.31456 | gap 1, overlap 2704822 TCCAGCCGTCCCGGA GCGGCAGG CACG CCTGC-GC TTTTTTCTGAGTTCC AFE_3011 2703590 - 2704915 + | 8-amino-7-oxononanoate synthase, putative TERM 2169 2705620 - 2705572 - g 78 -10.8 -3.86015 | gap 1, opp_overlap 2705612 TATCTGGTGTACAAA CCCCACCC-CGACGTGGTGGCGC GCTT GCGCCGCCCGGGCGCGGATGAGG GGGAGGCATCCGGTT TERM 2170 2705718 - 2705731 + G 71 -8.1 -4.07568 | GCTGACCTCTTCCAC GGGCT TCGA AGCCC TTTTGCGCGCCAAAC AFE_3012 2704984 - 2706027 + | capsule polysaccharide biosynthesis protein TERM 2171 2706477 - 2706495 + GF 83 -2.2 -5.24129 | overlap 2706479 2706480 CCCGGTAATTTTCGA CTGCGCGC GAT GCGTGATG TTTTTTATCACGCGG AFE_3013 2706024 - 2707334 + | capsule polysaccharide modification protein AFE_3014 2707241 - 2708014 + | oxidoreductase, short-chain dehydrogenase/reductase family TERM 2172 2708092 - 2708103 + G 77 -3.6 -5.00616 | AGTGGATCCTCCGGC CTCG CATA CGGG TTTTTTGGCGGCGCC TERM 2173 2708108 - 2708120 + G 80 -3.3 -5.04385 | TCGCATACGGGTTTT TTGGC GGC GCCCA TTTTTTACCCATGTG TERM 2174 2708187 - 2708226 + G 81 -4.8 -4.94902 | opp_overlap 2708191, overlap 2708176 ATCCTGGCCATAGTG GAAAGGCCATGGTTCGCG CTCA CGATTACCACGGCCTTGC TTTTTCTGGTGGTTA AFE_3016 2708007 - 2709599 + | capsular polysaccharide biosynthesis protein, putative mutY 2710682 - 2709573 - | A/G-specific adenine glycosylase AFE_3017 2712019 - 2710679 - | hypothetical protein TERM 2175 2711071 - 2711108 + gr 74 -9.8 -3.68222 | CTATCCGGGGCAAGT GTCGGATGGCCACCTG ATAGGC CAGGTGGCCCTGCAAC TTCTTCCAGTTGAGG ptsI 2713661 - 2711949 - | phosphoenolpyruvate-protein phosphotransferase TERM 2176 2712987 - 2712953 - GR 74 -7.8 -4.09243 | overlap 2712935 GATACTGCCGTAAAA TCAGGGCGTCCGGC GCAACCA GCAGGATACCCTGA TCGCCATCGACGATC TERM 2177 2713122 - 2713136 + gr 71 -6.4 -4.24342 | GAAGTCGGTTACCCA GGCAAG CAC CTTGTC TTTCTTCATCAAGAC ptsH 2713930 - 2713658 - | phosphocarrier protein HPr TERM 2178 2713995 - 2713970 - R 90 -8.3 -4.78077 | gap 1, overlap 2713985 2713990 GTGAATGAAAATAAA GCG-GCCACGCT GAA AGCATAGCGCGC GACGCCAGCCCGGAC AFE_3020 2714454 - 2714038 - | PTS system, IIA component, putative AFE_3021 2715350 - 2714451 - | ATPase hprK 2716282 - 2715350 - | Hpr(Ser) kinase/phosphatase AFE_3023 2716783 - 2716337 - | phosphoenolpyruvate-dependent sugar PTS system, EIIA component yfiA 2717131 - 2716790 - | ribosomal subunit interface protein rpoN 2718662 - 2717235 - | RNA polymerase sigma-54 factor TERM 2179 2718608 - 2718582 - G 79 -13 -3.50572 | opp_overlap 2718590 ATCGACCGTAGACAA CTGCAGCAGACG AAT CGCCTGTTGCAG TTGCGGCGTCATGGC AFE_3026 2719400 - 2718675 - | ABC transporter, ATP-binding protein TERM 2180 2718955 - 2718931 - G 74 -6.3 -4.4891 | TCGAGCAGGATAAAA CGCGGACTC ATGGCCA GCGCCCGCG CAATTTCCACACGCC AFE_3027 2719945 - 2719397 - | hypothetical protein AFE_3028 2720486 - 2719917 - | hypothetical protein kdsC 2721066 - 2720512 - | 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase AFE_3030 2722049 - 2721063 - | sugar isomerase, KpsF/GutQ family AFE_3031 2722803 - 2722369 - | hypothetical protein AFE_3032 2723482 - 2722793 - | nucleotidyltransferase family protein TERM 2181 2723179 - 2723169 - GR 83 -2.4 -5.1861 | TTCACCAGCAAAAAA GGCG CGT CCCC CAATAAAGGCAAGGC AFE_3033 2724483 - 2723455 - | phosphotransferase, putative TERM 2182 2723593 - 2723554 - GH 95 -15 -3.32819 | opp_overlap 2723567, overlap 2723555 2723567 GACATAGGTCCAGAA TCGCGGCAGGAAATCGAG ATAA CCCGATTTCCCGTCGCGG TACGCGAGGCGGCAG TERM 2183 2723592 - 2723555 - GH 100 -18.5 -2.5937 | opp_overlap 2723567, overlap 2723554 2723567 ACATAGGTCCAGAAT CGCGGCAGGAAATCGAG ATAA CCCGATTTCCCGTCGCG GTACGCGAGGCGGCA TERM 2184 2724561 - 2724543 - H 100 -7.4 -5.30189 | TACAATACCAAAAAA TCCCGG CCCCGCC CCGGGA GACGCCCCCATCTCC AFE_3034 2724591 - 2726696 + | organic solvent tolerance protein, putative surA 2726819 - 2728129 + | survival protein SurA TERM 2185 2728283 - 2728305 + G 71 -9 -3.74077 | CTACCTGGTGGTTTT CGGGAACGCC CTG GGCGGTCGCG TTTCCGTCTATCCGG TERM 2186 2728890 - 2728934 + G 80 -14.3 -3.06796 | opp_overlap 2728917 2728918 ACCGGTCTCCTTGCC TGGCGCCTGCTGGCGCG TGGTTACAAAT TGCGCCAGTAGGCGCCC TTGAATGCCGTCCGC AFE_3036 2728122 - 2728928 + | ABC-2 type transporter AFE_3037 2728939 - 2729271 + | BolA family protein TERM 2187 2729384 - 2729394 + G 71 -8.2 -4.04206 | GGCAGCCCGCGAGCA CCGC AAT GCGG TTTCTCTGCCCGTGC AFE_3038 2729303 - 2729635 + | glutaredoxin-related protein TERM 2188 2730103 - 2730083 - g 90 -14.7 -3.53224 | opp_overlap 2730095 2730099 GACGGTTTCGTTAAA GCGCAGGCA GCA CGCCTGCGC GGCACGCGCATCGTT murA 2729645 - 2730916 + | UDP-N-acetylglucosamine 1-carboxyvinyltransferase hisG 2730913 - 2731560 + | ATP phosphoribosyltransferase TERM 2189 2732658 - 2732686 + G 100 -12.4 -4.7254 | opp_overlap 2732660, overlap 2732660 GTGGCCGGCCCCAAC CATGTGCTGCCC ACGGG GGGCAGCGCACG TTTTTCCTCGCCCCT TERM 2190 2732660 - 2732684 + G 72 -13.6 -2.65504 | opp_overlap 2732660, overlap 2732658 GGCCGGCCCCAACCA TGTGCTGCCC ACGGG GGGCAGCGCA CGTTTTTCCTCGCCC hisD 2731557 - 2732858 + | histidinol dehydrogenase TERM 2191 2733223 - 2733239 + G 76 -12.3 -3.32268 | overlap 2733212 2733235 TTTCGTCATGTACCG GCTGCTG GCG CAGCAGC TTGGTCTGCCTTTTG hisC-1 2732855 - 2733934 + | histidinol-phosphate aminotransferase hisB 2733931 - 2734530 + | imidazoleglycerol-phosphate dehydratase TERM 2192 2734963 - 2734984 + G 70 -10.1 -3.55603 | overlap 2734963 2734965 AACATCCGCTGTTTG CCGGCGTTC CCCA GAACGCCTG GTTTTATTTCGTCCA TERM 2193 2734963 - 2734985 + G 100 -9.9 -4.93877 | gap 1, overlap 2734963 2734965 AACATCCGCTGTTTG CC-GGCGTTC CCCA GAACGCCTGG TTTTATTTCGTCCAC TERM 2194 2734965 - 2734982 + G 72 -11.3 -3.34291 | overlap 2734963 2734963 CATCCGCTGTTTGCC GGCGTTC CCCA GAACGCC TGGTTTTATTTCGTC hisH 2734527 - 2735198 + | imidazole glycerol phosphate synthase, glutamine amidotransferase subunit hisA 2735238 - 2735966 + | phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase hisF 2735971 - 2736732 + | imidazoleglycerol phosphate synthase, cyclase subunit hisIE 2736819 - 2737511 + | phosphoribosyl-AMP pyrophosphatase/phosphoribosyl-ATP cyclohydrolase tatA 2737591 - 2737809 + | twin-arginine translocation protein, TatA/E family tatB 2737816 - 2738184 + | twin-arginine translocation protein TatB tatC 2738323 - 2739129 + | Sec-independent protein translocase TatC TERM 2195 2739327 - 2739312 - f 76 -3.4 -5.09225 | ACGTTATTGAAAAAA TAATAA CTAC TTATTA GCGCTTATGATTCAC cbbL-1 2739425 - 2740846 + | ribulose bisphosphate carboxylase, large subunit TERM 2196 2740929 - 2740901 - g 84 -10.9 -4.00782 | opp_overlap 2740889, overlap 2740891 2740889 2740886 GTACAGGATTACAAA TCCCGTCTCTCCG ACC CGGCGAGCCGGAA GTTCGAGACACTGTC cbbS-1 2740877 - 2741233 + | ribulose bisphosphate carboxylase, small subunit TERM 2197 2741239 - 2741281 + F 74 -11.3 -3.2964 | gap 1, opp_overlap 2741234 GACCGTATAAGTCCC GTGCCGTACC-GCCCAGC CTTTTTGC GCTGAGCCGGTGCGGCGC TTGTCGAGAGCATTT cbbQ-1 2741389 - 2742192 + | CbbQ protein AFE_3054 2742244 - 2744562 + | von Willebrand factor type A domain protein AFE_3055 2744819 - 2744652 - | hypothetical protein TERM 2198 2744680 - 2744700 + gF 78 -4.5 -4.85599 | opp_overlap 2744675, overlap 2744685 GGCCTCAAACCGGAT GGCCTCTCC GCA GGGGTTGCC TTTTTCTGCCATCCC AFE_3056 2744758 - 2744961 + | hypothetical protein TERM 2199 2746304 - 2746294 - g 78 -4.6 -4.82667 | opp_overlap 2746300, overlap 2746300 TTACGAGAGCAAAAA CCAC AAG GCGG ATCGCGTGCATTACT AFE_3057 2744939 - 2747464 + | sensory box-containing diguanylate cyclase, putative pyrC-1 2748861 - 2747587 - | dihydroorotase, multifunctional complex type pyrB 2749850 - 2748867 - | aspartate carbamoyltransferase pyrR 2750353 - 2749847 - | PyrR bifunctional protein AFE_3061 2750781 - 2750350 - | hypothetical protein AFE_3062 2751331 - 2750774 - | hypothetical protein TERM 2200 2751374 - 2751363 - R 72 -3.6 -4.72272 | overlap 2751345 CTTTCCTACCAAAAA CGGC AGGT ACCG TGATCACCGGCACGA gshB 2752339 - 2751401 - | glutathione synthetase TERM 2201 2751557 - 2751541 - G 72 -2.1 -4.84359 | overlap 2751542 2751544 2751545 CCAGGCCGACAAAAA GCAGGCC CGC AGCGCGC AAGGCCGGGCCTATC gshA 2753646 - 2752336 - | glutamate--cysteine ligase citZ 2754816 - 2753656 - | citrate synthase II TERM 2202 2753991 - 2754005 + g 74 -7 -4.42653 | overlap 2753993 CCTTGAGAATCACTG CACGCG GAT CGCGGG TTTTGTAGATGCGAT AFE_3066 2755001 - 2754828 - | hypothetical protein TERM 2203 2754982 - 2754964 - G 100 -12.4 -5.07652 | GCCCGTAAAATAAAA GGGAGGCC GTC AGCCTCCC CTTGGGGCACTTCCA AFE_3067 2755383 - 2755009 - | iron-sulfur cluster assembly accessory protein pdhC 2758464 - 2755513 - | pyruvate dehydrogenase complex, E2 and E3 components TERM 2204 2757029 - 2757015 - G 74 -12.8 -3.1552 | overlap 2757013 GGTCATTGAGGAACA GCGCCG CCT CGGCGC CATTGACCACCCGGT TERM 2205 2757523 - 2757510 - G 72 -2.3 -4.8048 | CGGTGACATGAAAAA CCGGA ATAC TCAGG GAAGCGGCCATCGCC pdhB 2759500 - 2758520 - | pyruvate dehydrogenase, E1 component, pyruvate dehydrogenase beta subunit TERM 2206 2758678 - 2758658 - G 78 -7.5 -4.71061 | overlap 2758662 ATCGAGATCGAAAAA GCATTCCTC GTT GAGGATCGC CATCACCTCGGAACC TERM 2207 2759012 - 2759022 + g 71 -8.2 -4.07687 | opp_overlap 2759012 TACCGGATCATCACA GCGC ACG GCGC TTTTCAGCAACCCGT pdhA 2760476 - 2759493 - | pyruvate dehydrogenase complex, E1 component, pyruvate dehydrogenase alpha subunit TERM 2208 2760390 - 2760376 - G 78 -2.7 -5.04385 | opp_overlap 2760377, overlap 2760377 TAGAGGTGCAAAAAA CCGCC GATCT GGCGT TCGTGGTAGGCCTCC TERM 2209 2760531 - 2760496 - R 95 -6.1 -5.36441 | overlap 2760498 2760499 CTCCTAGACAAAAAA CATTGGACCTGTGTC ACTAGG GACACAGGTCTCAGG TGAATGAGTGAGAGC TERM 2210 2760529 - 2760498 - R 77 -7.3 -4.31943 | overlap 2760496 2760499 CCTAGACAAAAAACA TTGGACCTGTGTC ACTAGG GACACAGGTCTCA GGTGAATGAGTGAGA TERM 2211 2760529 - 2760499 - R 71 -10.6 -3.18081 | gap 1, overlap 2760498 2760496 CTAGACAAAAAACAT TG-GACCTGTGTC ACTAGG GACACAGGTCTCA GGTGAATGAGTGAGA AFE_3071 2761143 - 2760865 - | hypothetical protein TERM 2212 2761009 - 2760981 - G 72 -10.9 -3.38768 | CGACAGTACCCAGAA CCGCACCACCGGC CGC GCCAATGGCGCCG CCGCTCAGGGCACGC AFE_3072 2761557 - 2761213 - | hypothetical protein argC 2762856 - 2761822 - | N-acetyl-gamma-glutamyl-phosphate reductase TERM 2213 2762919 - 2762891 - R 81 -12.6 -3.06261 | gap 1, opp_overlap 2762897, overlap 2762897 TGCTAATCCGTAACA GAAA-AAGCCGCC CGAA GGCGGCTTGTTTC GCAGCTCGAAGCGTG TERM 2214 2762897 - 2762912 + r 86 -11.8 -3.91716 | opp_overlap 2762891 2762897 TCCGTAACAGAAAAA GCCGCC CGAA GGCGGC TTGTTTCGCAGCTCG TERM 2215 2762912 - 2762897 - R 100 -11.8 -5.0916 | opp_overlap 2762897, overlap 2762891 TCCGTAACAGAAAAA GCCGCC CGAA GGCGGC TTGTTTCGCAGCTCG rpsI 2763326 - 2762940 - | ribosomal protein S9 rplM 2763767 - 2763339 - | ribosomal protein L13 AFE_3076 2763828 - 2764322 + | hypothetical protein AFE_3077 2764901 - 2764617 - | hypothetical protein AFE_3078 2765400 - 2765188 - | hypothetical protein AFE_3079 2766085 - 2765486 - | nitroreductase family protein TERM 2216 2765649 - 2765633 - G 80 -10.1 -4.08485 | CGCATCGAAATCAAA CCCGTCC ATG GGACAGG AGTCATAACCCAGAT TERM 2217 2766238 - 2766206 - R 100 -18.5 -5.75342 | TTTGCGCAAAAAAAA CAACCCCGCCTCGAT ATC ACTGAGGCGGGGTTG AGGGGTATAGGTGTC TERM 2218 2766385 - 2766417 + r 72 -11.1 -3.14132 | overlap 2766388 GGTTAAAACTGGTCT GGTCCCGGGCGCGGC TGT GCCGCGCTCGAGGTG TTGCTGAAGGGAAGG TERM 2219 2766388 - 2766415 + r 100 -17 -3.13403 | gap 1, overlap 2766385 TAAAACTGGTCTGGT CC-CGGGCGCGGC TGT GCCGCGCTCGAGG TGTTGCTGAAGGGAA TERM 2220 2768852 - 2768864 + r 71 -6.2 -4.2354 | AGGATCTATTTCACT CCGC TCTCC GCGG TTCTTTTCGCCTTTC TERM 2221 2769771 - 2769782 + r 83 -5.8 -4.86731 | CGAGTGGCGTGTGTG GGGT CTAG ACCC TTTTCTTTAAAGGAG tyrS 2772804 - 2771581 - | tyrosyl-tRNA synthetase AFE_3086 2775195 - 2772904 - | plasma-membrane proton-efflux P-type ATPase, putative AFE_3087 2775313 - 2775176 - | hypothetical protein AFE_3088 2775299 - 2775439 + | hypothetical protein panD 2775436 - 2775819 + | aspartate 1-decarboxylase TERM 2222 2776881 - 2776867 - g 74 -12.8 -3.21726 | overlap 2776860 GTGGACAAGAGCCAA CGCGGC CTG GCCGCG ACGGTGAACAGCCTG AFE_3090 2775868 - 2777061 + | hypothetical protein AFE_3091 2777065 - 2777160 + | hypothetical protein TERM 2223 2777868 - 2777851 - g 100 -12.7 -4.97405 | ATTCAGAAAAAGAAA CCCCAGC CGGA GCTGGGG CGAATAGCGAGTTCT ysxC 2777220 - 2777906 + | ribosome biogenesis GTP-binding protein YsxC TERM 2224 2778098 - 2778117 + G 71 -5.6 -4.39828 | TGGTATCCGCATTTT CCCATCGC GGCG GCGGTAGG TTTTCTCGGGCTCTT TERM 2225 2779040 - 2779026 - g 71 -5.6 -4.41348 | TGGCGGTCAAAGAAA TGGAGG GCT CCGCCA AAACCGTAGCTGCCG AFE_3093 2777972 - 2779234 + | cation channel protein, putative polI 2781936 - 2779237 - | DNA polymerase I TERM 2226 2782073 - 2782033 - g 70 -3.8 -4.59773 | gap 1, opp_overlap 2782071, overlap 2782044 CTCGATGCGGAAAAA CTGCGCGACAAGGGCGAGG GGCG CCTCACCCGTGAAGC-CTG GAAAATTTTTCAGAT TERM 2227 2782063 - 2782044 - g 72 -11.4 -3.30903 | overlap 2782033 AAAACTGCGCGACAA GGGCGAGG GGCG CCTCACCC GTGAAGCCTGGAAAA AFE_3095 2781988 - 2782725 + | conserved hypothetical protein TIGR00730 TERM 2228 2782853 - 2782836 - g 70 -3.3 -4.60487 | overlap 2782838 GACGATCTCCAAAAA CTGCATC TGCC GACGCTG GCCCCCAAGGCCAAA AFE_3096 2782746 - 2783081 + | hypothetical protein TERM 2229 2783271 - 2783259 - g 70 -3.3 -4.70659 | CTCGACACCGAAAAA GGTCA TTT TGTCC TGACCATATTCGAGC thrB 2783124 - 2784056 + | homoserine kinase AFE_3098 2784418 - 2784095 - | hypothetical protein AFE_3099 2784621 - 2785223 + | hypothetical protein AFE_3100 2785641 - 2785234 - | competence protein ComEA helix-hairpin-helix repeat protein uvrD 2787789 - 2785660 - | DNA helicase II TERM 2230 2788143 - 2788174 + G 72 -13.6 -2.64155 | overlap 2788140 2788139 GGCCAGGAGTTCCGG CCCCCGCCCGGTTG GGGT CAGGCGGCCGGGGG TGGCTTTGGCGGGGG cbpA 2787906 - 2788838 + | curved DNA-binding protein AFE_3103 2789156 - 2789824 + | phosphoribosyl transferase domain protein TERM 2231 2790115 - 2790089 - g 78 -4.4 -4.7657 | gap 1, overlap 2790093 GAAAAACTGGAAAAA CAGACCCCGCC CGCGCT GACGGAG-CTG CTCAAGGTGCCGGGT AFE_3104 2789828 - 2791558 + | DNA polymerase X family protein TERM 2232 2791578 - 2791599 + T 80 -8.7 -4.14652 | gap 1, overlap 2791593 TGACGGACTAAACTG TCACTCCGGC GGA GCCGGGG-GA TTTCCTGTTTTTGAT AFE_3105 2791952 - 2791647 - | ISAfe6, transposase, degenerate AFE_3106 2792245 - 2792135 - | hypothetical protein TERM 2233 2792391 - 2792436 + H 71 -6.2 -4.2461 | gap 2 GGTCGGGAAATGACG GGCTTGGTCGTGGGATGGTGGT CCTG ATCACCATCCC-TG-CAGGGCC TTTCTTGCTCCGCCT TERM 2234 2793275 - 2793264 - g 78 -2.2 -5.06451 | CATTATTTCAAAAAA GGTC TTAG AACC AATGATCCGTATGCC cycA-1 2792679 - 2793383 + | cytochrome c4 sdr_1 2793376 - 2794167 + | oxidoreductase, short-chain dehydrogenase/reductase family petA-1 2794266 - 2794886 + | ubiquinol--cytochrome c reductase, iron-sulfur subunit TERM 2235 2795054 - 2795069 + G 90 -4.6 -5.31275 | GTTGATGATCGTGCT CCAGCT GATT AGCGGG TTTTTTCTGATGGCG petB-1 2794914 - 2796122 + | ubiquinol--cytochrome c reductase, cytochrome b subunit petC-1 2796119 - 2796847 + | ubiquinol--cytochrome c reductase, cytochrome c1 subunit TERM 2236 2796885 - 2796920 + F 71 -4.6 -4.59773 | opp_overlap 2796882 2796880, overlap 2796887 CGGGCATGAAGATGG CCCGCCTGACCA GCGCGTTTTTAG GGGTCTGGCGGG TTTTTCGACATGAAC TERM 2237 2798561 - 2798571 + G 71 -6.8 -4.28375 | opp_overlap 2798556 2798561 2798560 2798554 CACAAACATATCAAC CTCG GGC CGAG TTTTACATATATTGC TERM 2238 2798714 - 2798739 + G 84 -9.7 -4.56367 | opp_overlap 2798705, overlap 2798707 CAATATCTTTTTATC CCAACGGGACC AAAT GGTTCCATTGG TTTATTTATGAAATA resB 2797400 - 2799244 + | cytochrome c-type biogenesis protein ResB TERM 2239 2800139 - 2800160 + G 74 -6.5 -4.40333 | opp_overlap 2800138, overlap 2800140 2800141 TATGGATAACATGAT GTCCAAGGC AATT GCCTTGGGA TTTCTGTTGTTTACG resC 2799366 - 2800424 + | cytochrome c-type biogenesis protein ResC AFE_3114 2800604 - 2800969 + | hypothetical protein TERM 2240 2801002 - 2800991 - T 83 -5.8 -4.88405 | opp_overlap 2800990 AATTGTGAAATAAAA GCGT TATG ACGC AATTCTGCCTGTCGT TERM 2241 2801573 - 2801589 + T 70 -9.5 -3.41878 | CCACGCTGTTCCTGC CAGATTC CAT GAATCTG TTATGCATTCAAGCC AFE_3115 2802960 - 2802475 - | hypothetical protein TERM 2242 2802634 - 2802621 - G 88 -2.3 -5.48213 | CACGCAAAACAAAAA CGATG CCTA CTTCG GCCAGTACCCGCAAG AFE_3116 2803535 - 2803921 + | hypothetical protein TERM 2243 2803949 - 2803924 - f 100 -13.3 -4.09685 | gap 1, overlap 2803925 CCTGACTTTTTAAAA TCGC-CGCGCCG GCG CGGCGCGCGCAA GCATAGGAGTGGTAG TERM 2244 2803942 - 2803925 - f 91 -14.1 -3.05597 | overlap 2803924 CTGACTTTTTAAAAT CGCCGCG CCGG CGCGGCG CGCGCAAGCATAGGA AFE_3117 2803965 - 2804195 + | hypothetical protein AFE_3118 2804238 - 2805377 + | pyridine nucleotide-disulfide oxidoreductase AFE_3119 2806556 - 2806194 - | hypothetical protein AFE_3120 2806719 - 2807033 + | hypothetical protein TERM 2245 2808795 - 2808810 + G 70 -3.9 -4.63218 | GAGGCGCTGGGTGCT GCCGG AAATAA CTGGC TTTTCTTCGGGGACC cysJ 2807385 - 2809151 + | sulfite reductase (NADPH) flavoprotein, alpha component cysI 2809141 - 2810832 + | sulfite reductase (NADPH) hemoprotein beta-component cysH 2810840 - 2811577 + | adenylylsulfate reductase, thioredoxin dependent cysD-2 2811574 - 2812512 + | sulfate adenylyltransferase, small subunit cysN 2812512 - 2813864 + | sulfate adenylyltransferase, large subunit TERM 2246 2814253 - 2814263 + G 72 -2.4 -4.85782 | overlap 2814240 TAGTGCGCCTCAAGG GGGG CGA CCCG TTTATTTTTGGACGC cobA 2813970 - 2814791 + | uroporphyrin-III C-methyltransferase AFE_3127 2814788 - 2815141 + | hypothetical protein TERM 2247 2815423 - 2815412 - g 70 -3.6 -4.61231 | overlap 2815413 GCACAGCTGTAAAAA CCAC TGGC GCGG TGCGGATTGATGAGA AFE_3128 2815171 - 2815677 + | hypothetical protein AFE_3129 2817099 - 2815696 - | voltage-gated chloride channel TERM 2248 2816217 - 2816159 - G 76 -6.6 -4.51763 | gap 1, opp_overlap 2816167 2816208, overlap 2816164 TAAGAAGATAACAAA CCAATGCAGCCG-GCCAGGACACCGCC TATCAG GGCAGTGACATAGATCGGCTGCTTCAG CTTCTTGAACAAATC TERM 2249 2816397 - 2816368 - G 71 -7.9 -4.11371 | gap 1, overlap 2816369 2816396 GAACAGCGGCGAAAA TCCTACCTTGGTGG CTA CCACC-AGGTAAGC TGCAGCCGATGCGGC AFE_3130 2817239 - 2817565 + | hypothetical protein AFE_3131 2817822 - 2817574 - | twin-arginine translocation protein, TatA/E family AFE_3132 2818259 - 2818486 + | hypothetical protein AFE_3133 2819356 - 2818547 - | hypothetical protein TERM 2250 2819316 - 2819296 - G 78 -4.6 -4.80167 | overlap 2819299 CACCAAAAAGCAAAA GAGGCGCA GCCGT CGCGCTTC CGAGCCAAGCCCATA AFE_3134 2819723 - 2819887 + | hypothetical protein AFE_3135 2820227 - 2820631 + | hypothetical protein TERM 2251 2821713 - 2821697 - f 72 -12.3 -2.78547 | opp_overlap 2821711 2821712, overlap 2821694 GCATTCCACTAACCA CGCCATG TCT CATGGCG CCTTGAACCTCCAGC TERM 2252 2822258 - 2822211 - g 100 -17.2 -3.54543 | AGCTATTTCGTCAAA CGCATGAGCGACAGCCTG CAGGAACGGGAT CAGGCTATCGCCCATGCG CGCGAAGAAAAACTG TERM 2253 2822416 - 2822392 - g 73 -5 -4.59944 | opp_overlap 2822392 AGGACTATAAAGAAA CCCAGAATCT TTCGG AAAGTCTGGG TATTTTGTATGAACA TERM 2254 2822774 - 2822788 + G 73 -4.2 -4.60797 | TCCGGAGATAGCCAG GGATGT GGG ACAACC TTTTGTCTCTAAAAA AFE_3136 2821701 - 2822954 + | sensor histidine kinase AFE_3137 2823014 - 2823529 + | DNA-binding response regulator AFE_3138 2824229 - 2823588 - | oxidoreductase, 2OG-Fe(II) oxygenase family TERM 2255 2823662 - 2823674 + g 77 -3.4 -4.88067 | overlap 2823660 TCTCTCGTATCCAGA TGGA GGCTA TCCA TTTTTCTCCATGGGT AFE_3139 2824874 - 2824347 - | hypothetical protein TERM 2256 2824597 - 2824629 + g 85 -5.6 -5.09225 | TTTTTGGCATCCGCA GAATCGGTCGGGAT TTTGC ATTGCGACAGATTC TTTTTTGCGTACAGT AFE_3140 2824978 - 2824886 - | hypothetical protein AFE_3141 2825428 - 2824988 - | Rrf2 family protein AFE_3142 2826636 - 2825443 - | major facilitator family transporter TERM 2257 2825976 - 2825966 - G 76 -6.8 -4.49981 | GAGAGCACCACAAAA CTGG CCC CCAG CACCATCTGCAGGAT TERM 2258 2826231 - 2826181 - G 84 -9.8 -4.18401 | opp_overlap 2826217, overlap 2826173 2826207 GGAGAGACCGTAAAA GACGGGCCCCATCGCCATC-CCCA GAACA TAGGCGATGGCGATGCTGCC-GCC GATGGCGGCCATGGC cyoE-2 2827600 - 2826656 - | protoheme IX farnesyltransferase AFE_3144 2828443 - 2827616 - | hypothetical protein TERM 2259 2827756 - 2827731 - G 95 -2.5 -5.72254 | overlap 2827735 2827742 TGAAACAATAAAAAA CCAACAGCAAC CTGG GTTACCGCCAG ATAAAAAGCGACAGG TERM 2260 2828078 - 2828060 - G 79 -8.8 -4.15044 | GGTGCCGTGAACAAA CGCCGG GGCCCTG CCGGCG AGGACATACAGGGTG AFE_3145 2828810 - 2828694 - | hypothetical protein TERM 2261 2828814 - 2828771 - G 100 -13.3 -4.32177 | gap 2, overlap 2828773 GTATTTTATAATAAA CACCAATGGCCAGGGCAAGAT AACC ATCC-GCCCTGGCCACCGG-G ATCTACACTAACAAA TERM 2262 2828813 - 2828773 - G 100 -17 -3.76219 | gap 1, overlap 2828771 ATTTTATAATAAACA CCAATGGCCAGGGCAAGAT AACC ATCC-GCCCTGGCCACCGG GATCTACACTAACAA rus 2829425 - 2828862 - | rusticyanin TERM 2263 2829788 - 2829752 - R 74 -4.2 -4.75954 | opp_overlap 2829773 2829777, overlap 2829753 AAAACGCAAAACAAA TCTGGATGGCCGCCCG TTATT CGCACGGCCATCGTGG AACGTCATGCGTTGC TERM 2264 2829777 - 2829814 + r 73 -5.5 -4.58242 | gap 1, opp_overlap 2829753 2829752, overlap 2829773 CGCCCGTTATTCGCA CGGC-CATCGTGGAACGT CAT GCGTTGCTAGATGCGCCG TTTTCTCCCTTTTTT coxD 2829987 - 2829793 - | cytochrome c oxidase, aa3-type, subunit IV coxC 2830582 - 2830028 - | cytochrome c oxidase, aa3-type, subunit III TERM 2265 2830112 - 2830146 + g 74 -6.4 -4.32034 | opp_overlap 2830108 2830106 GTTATACGACACCCA TCGCTCGCGTTTCG CGCGCTC CGGAGTGCGGGTGA TTTTCATGATACTCG coxA 2832485 - 2830602 - | cytochrome c oxidase, aa3-type, subunit I TERM 2266 2831760 - 2831747 - G 76 -6.7 -4.44608 | GCGACGCAAAAAGAA TGGTG GCGG CACCA AGGACGTACCACACA TERM 2267 2831872 - 2831858 - G 77 -7.8 -4.28994 | TAGGACTCATGAAAA CAGCGA CAG TCGCCG GTGGTAAAAGCCACC coxB 2833306 - 2832542 - | cytochrome c oxidase, aa3-type, subunit II TERM 2268 2832721 - 2832731 + g 74 -3.2 -4.82901 | GCCGCACTTCATTTG GGAT CAC GTCC TTTTTCTCACCCCAG TERM 2269 2832871 - 2832905 + g 85 -6.4 -4.84527 | AAGAGAACGTCCACT TCCATTGTTGCGCGGT AAC ATCGATCACCAATGGA TTTTTCGTATCTAAC AFE_3151 2833872 - 2833321 - | hypothetical protein TERM 2270 2833610 - 2833653 + g 73 -14.1 -2.79796 | gap 1, opp_overlap 2833615, overlap 2833615 AGTGTTCTGCCGATG GAGAACTGATGCGCAATCGG GGGTG CCGATTGCG-ATCGGTTATC TATCGTCAACTCCAC TERM 2271 2833615 - 2833648 + g 82 -12.6 -3.61902 | gap 1, opp_overlap 2833615, overlap 2833610 TCTGCCGATGGAGAA CTGATGCGCAATCGG GGGTG CCGATTGCG-ATCGG TTATCTATCGTCAAC cyc1 2834666 - 2833974 - | cytochrome c552 cyc2 2836135 - 2834678 - | cytochrome c TERM 2272 2835679 - 2835644 - G 89 -11.8 -4.23781 | GTCATCAAAACTAAA TCCTCCGGCACCGGCA CCAC TGCCGCCGCCAGAGTA GGTCAAATGCAGAAA AFE_3154 2836820 - 2837512 + | ISAfe4, transposase orf3, degenerate AFE_3155 2838664 - 2837552 - | hypothetical protein TERM 2273 2838696 - 2838675 - H 100 -7.3 -5.1861 | opp_overlap 2838677 2838694, overlap 2838677 TGCATGATCAAAAAA CACTTCAGC TTCC GCTGAAGTT GAGTCGCACTCACCT TERM 2274 2838694 - 2838677 - H 83 -9.9 -4.22314 | opp_overlap 2838677, overlap 2838675 CATGATCAAAAAACA CTTCAGC TTCC GCTGAAG TTGAGTCGCACTCAC AFE_3156 2839069 - 2839290 + | hypothetical protein AFE_3157 2839681 - 2839388 - | ISAfe6, transposase, degenerate htpG 2841668 - 2839779 - | heat shock protein HtpG TERM 2275 2840102 - 2840112 + g 91 -8.2 -4.77157 | CCGTCTCCACCCGCT CGCC TAA GGCG TTTTTGATGCGTTCC AFE_3160 2841714 - 2841863 + | hypothetical protein AFE_3159 2842176 - 2841856 - | hypothetical protein TERM 2276 2842033 - 2842050 + g 71 -7 -4.21319 | GGCGTCGATATTGCG GCGGAT ATCGCC ATCCGC TTTCTTGGCCTTCCT AFE_3161 2843357 - 2842362 - | D-isomer specific 2-hydroxyacid dehydrogenase family protein TERM 2277 2842481 - 2842470 - G 89 -7.2 -5.03314 | CTCACTGGTAAAAAA GGCC TGAT GGCC CGTGATGATGACATT TERM 2278 2843727 - 2843770 + r 100 -18.6 -2.83164 | opp_overlap 2843746 AACGCCGGGATGATG CTTTATTGTCCGTTAACA ATAACACC TGTTAACGGACAATAAAG TATCATCCTGGATCA AFE_3162 2844547 - 2844062 - | acetyltransferase, GNAT family AFE_3163 2844970 - 2844650 - | isochorismate pyruvate lyase, putative AFE_3164 2845648 - 2845001 - | ABC transporter, ATP-binding protein TERM 2279 2845330 - 2845343 + g 73 -4.5 -4.59773 | opp_overlap 2845316 ATTCCAGAATATCCG GACCG ACCC TGGTC TTTTTGGCCATGGCG AFE_3165 2846879 - 2845659 - | hypothetical protein AFE_3166 2847468 - 2847007 - | acetyltransferase, GNAT family TERM 2280 2847087 - 2847076 - G 71 -5.8 -4.36914 | opp_overlap 2847075 GTTGCGCTGATAAAA CCTG TGCG CAGG ATGATTGGTGACGTA AFE_3168 2848874 - 2848227 - | hypothetical protein TERM 2281 2848308 - 2848325 + g 70 -3.4 -4.66163 | GGGATGGCTCCGATA CTGCGA TATGTT TTGCAG TTTTTCCATGGCGGT AFE_3169 2849370 - 2848885 - | hypothetical protein AFE_3170 2849839 - 2849372 - | hypothetical protein AFE_3172 2850662 - 2850264 - | glyoxalase family protein AFE_3173 2851327 - 2850902 - | hypothetical protein AFE_3174 2851820 - 2851317 - | prevent-host-death family protein AFE_3175 2853012 - 2853968 + | hypothetical protein AFE_3176 2854800 - 2853973 - | ISAfe9, transposition helper protein AFE_3177 2856281 - 2854797 - | ISAfe9, transposase AFE_3178 2856479 - 2856748 + | hypothetical protein AFE_3179 2856718 - 2856891 + | hypothetical protein AFE_3180 2856858 - 2857016 + | hypothetical protein TERM 2282 2857281 - 2857302 + T 71 -5.9 -4.3739 | gap 1, overlap 2857285 GCAAGCCGATGCCGT TGGA-GCGCA TGC TGCGCATTCA TTTTCTGCAGCAGTG AFE_3183 2859300 - 2858272 - | ISAfe1, transposase TERM 2283 2858671 - 2858682 + g 71 -7.2 -4.15222 | CATCAATCGAGTCAC GGCC TCTT GGCC TTTCTTCCACAGCGT TERM 2284 2858694 - 2858704 + g 71 -6.8 -4.2349 | GGCCTTTCTTCCACA GCGT CAA ACGC TTTTCGATATCCGCA TERM 2285 2860279 - 2860257 - R 74 -4.6 -4.72986 | GAGTTCCACCAAAAA CCGGGAACGG AAA CGGGACCCGG AGATGAGCTCGACGA TERM 2286 2860780 - 2860763 - R 80 -9.1 -4.08216 | GCACTGCGCCCAAAA TCCGCCC CAAG GGGCAGA ATGGACGGGATCTCG mrr 2862336 - 2861419 - | Mrr restriction system protein AFE_3187 2862792 - 2863064 + | transposase. degenerate TERM 2287 2863458 - 2863435 - g 100 -10.2 -4.88407 | GCACGTAATGAAAAA GGCGCCGACA TTGC CGTCGTCGCC AGGAAATTACGATGC AFE_3188 2863235 - 2863513 + | hypothetical protein AFE_3189 2864887 - 2864024 - | hypothetical protein AFE_3190 2865031 - 2864900 - | hypothetical protein TERM 2288 2865288 - 2865268 - H 74 -9.7 -3.63744 | overlap 2865266 2865270 CTTGGTTGGAAAATA TACTTCGGC GTA GCCGAAGTG CTGAGTCCCGGTCCT TERM 2289 2865286 - 2865270 - H 80 -12.3 -3.39908 | overlap 2865268 2865266 TGGTTGGAAAATATA CTTCGGC GTA GCCGAAG TGCTGAGTCCCGGTC TERM 2290 2868180 - 2868162 - g 70 -10.2 -3.44051 | opp_overlap 2868174 CTTCGAGCAGCACAA GCCCTCGA CGT TCGCGGGC TTGGCCAGCGTATTC AFE_3191 2865496 - 2868222 + | type III restriction-modification system, Res subunit TERM 2291 2868569 - 2868553 - g 80 -15.1 -3.01712 | TCTCCTCGCTCAAGA GCGGCGC GCT GCGCCGC CAGATCGAGGACGCG TERM 2292 2869296 - 2869306 + G 85 -3.2 -5.32565 | AGTAAAGAAGGAGAT TTGG TTG CCGA TTTTTTCGTTGGTTC TERM 2293 2869578 - 2869568 - g 75 -2.4 -5.0065 | CACCCAGAAAGAAAA CGAG TTC CGCG ACCTGATCTTGCGCG AFE_3192 2868225 - 2870480 + | type III restriction-modification system, Mod subunit TERM 2294 2871183 - 2871154 - g 93 -11.3 -4.30987 | overlap 2871129 ATCCTGGAGAACAAA GACGCGGCGCACA AACG CGAGCGCCGTGTC GCCGTCATCAACGCA AFE_3193 2870533 - 2873217 + | PHP domain protein AFE_3194 2873220 - 2874431 + | ATP-dependent DNA helicase RecG domain protein AFE_3195 2876102 - 2874471 - | Tn5468, orf5 tnsD-2 2877951 - 2876122 - | Tn5468, transposition protein D TERM 2295 2877944 - 2877958 + g 76 -5.6 -4.62069 | opp_overlap 2877943 2877944 ATTTCCGGGAAATAG GCCAAC ACG GGTGGC TTTTTCAGCTCGCGA tnsC-2 2879618 - 2877963 - | Tn5468, transposition protein C TERM 2296 2879466 - 2879486 + g 72 -2.3 -4.86621 | overlap 2879473 GCAATGCGCCCGGAG GTGGGCGGC GTA GCCACGCTC TTTTTCGTTAAAAAT tnsB-2 2881767 - 2879602 - | Tn5468, transposase protein B TERM 2297 2879701 - 2879715 + g 71 -7.8 -4.07885 | overlap 2879678 ATTCCCCTTGGGGAA GGGGAG GAT TTCCCC TTTTACCGAAGCATC tnsA-2 2882600 - 2881764 - | Tn5468, transposase protein A glmS 2884609 - 2882774 - | glucosamine--fructose-6-phosphate aminotransferase, isomerizing glmU 2886022 - 2884655 - | UDP-N-acetylglucosamine pyrophosphorylase TERM 2298 2886115 - 2886074 - R 100 -18.1 -4.50976 | opp_overlap 2886071 2886080 2886082, overlap 2886076 CGCCAGACCATAAAA TACACAGACCCCAGGGACT CTTC AGCCGCTGGGGTCTGTGTG GCGTTACTCGACACG TERM 2299 2886113 - 2886076 - R 100 -20.7 -3.8637 | opp_overlap 2886071 2886080 2886082, overlap 2886074 CCAGACCATAAAATA CACAGACCCCAGGGACT CTTC AGCCGCTGGGGTCTGTG TGGCGTTACTCGACA TERM 2300 2886080 - 2886109 + r 75 -12.1 -2.92157 | opp_overlap 2886076 2886074, overlap 2886071 2886082 ACCATAAAATACACA GACCCCAGGGACT CTTC AGCCGCTGGGGTC TGTGTGGCGTTACTC atpC 2886576 - 2886151 - | ATP synthase F1, epsilon subunit atpD 2887989 - 2886580 - | ATP synthase F1, beta subunit TERM 2301 2887953 - 2887963 + g 72 -2.4 -4.86731 | TCACCTGGACGATAT GGCC GAC GGCG TTTTCTTTAGCAACC atpG 2888897 - 2888031 - | ATP synthase F1, gamma subunit TERM 2302 2888772 - 2888803 + g 74 -12.2 -3.13403 | gap 1, overlap 2888771 CTCCGCGTAGGGACG GGCGGCGCGCATCCG CTC CTGA-GCGCGCCGCA TCTTGCTGGCAGCCA atpA 2890451 - 2888907 - | ATP synthase F1, alpha subunit TERM 2303 2889595 - 2889579 - G 70 -5.1 -4.57474 | overlap 2889583 GGAATGCAGATAAAA CACATCC CCC GGATACG CTTCACGGCCCGGCG TERM 2304 2890042 - 2890054 + g 81 -4.7 -5.00884 | overlap 2890043 CTCTGCCGGTCGATT ACGCC AGG GGCGA TTTTTTCAAGGACGT atpH 2891007 - 2890468 - | ATP synthase F1, delta subunit TERM 2305 2890984 - 2890965 - G 73 -9.2 -3.89346 | TCGCCAGCCCATAAA GCGCCTCT GCGT AGGGGCGC GCCACGGTGATCAGA atpF 2891497 - 2891018 - | ATP synthase F0, B subunit atpE 2891794 - 2891540 - | ATP synthase F0, C subunit atpB 2892585 - 2891836 - | ATP synthase F0, A subunit TERM 2306 2891888 - 2891871 - G 71 -7.7 -4.04206 | overlap 2891872 CCATGCCGAGATAAA CCACCGT CAGC ACGGTGA AAATAAATGCTTGCA AFE_3210 2892959 - 2892588 - | hypothetical protein AFE_3211 2893898 - 2893014 - | parB family protein AFE_3212 2894677 - 2893895 - | chromosome partitioning protein parA TERM 2307 2894600 - 2894627 + g 77 -8.3 -4.41494 | GGCGGCCAGATTGAC GGCGGTGGTGG TCTTAC CCACCCCCCCC TTTTGATTGGCGATA gidB 2895389 - 2894724 - | methyltransferase GidB gidA 2897268 - 2895394 - | glucose-inhibited division protein A TERM 2308 2896620 - 2896598 - G 80 -3.2 -5.04601 | overlap 2896599 GTCATAAAGGAAAAA GCGGGCGGTG GCG CATCGCCGGG TTGGGCCTCCAGCAC TERM 2309 2897234 - 2897178 - G 100 -21.1 -3.50853 | opp_overlap 2897198, overlap 2897175 TCTGGGTAAGCAGAA GCGTGCGCACGCCGAGACGG--GCGGCTG CGG CAGCCGCTTCCGTCCCGGCGTG-AC-CGC CGCCGACTACGATAA TERM 2310 2897198 - 2897214 + g 76 -13.7 -3.05596 | opp_overlap 2897175 2897178 CGCACGCCGAGACGG GCGGCTG CGG CAGCCGC TTCCGTCCCGGCGTG AFE_3215 2897736 - 2897287 - | lipoprotein, putative AFE_3216 2898263 - 2897724 - | hypothetical protein TERM 2311 2898204 - 2898187 - G 74 -6.9 -4.36914 | overlap 2898166 TGCGCCGCCAGAAAA GGCAGCG GTTC CGGTGCC AGTGTCTCTGTCTGC moaB 2898815 - 2898273 - | molybdenum cofactor biosynthesis protein B TERM 2312 2898688 - 2898724 + g 73 -10.1 -3.60792 | overlap 2898696 TGGTGTCCGGCGTGG CTGGCGAGTTCGGCAAC TTT GTCGCCGGATTTGTCGG TTTCCGGCTTGCGGC AFE_3218 2898964 - 2899899 + | magnesium and cobalt transport protein, putative TERM 2313 2899965 - 2899955 - g 89 -6.8 -5.14563 | opp_overlap 2899962 GGTTTGACGAAAAAA CGGA TGC TCCG TTGGAAGTCACGGCG AFE_3219 2899930 - 2900871 + | magnesium and cobalt transport protein, putative TERM 2314 2901063 - 2901091 + G 70 -10.4 -3.54424 | gap 2 TCACCCTACGCCTGC CCGTGGCGTCGCTG GAG CAG-GACGC-ACGG TTTGGCACGGTGGCA TERM 2315 2901749 - 2901763 + G 91 -4.2 -5.50499 | TTGTTCGCGCGCTGG GCCG GTAAGCA CGGC TTTTTTTCCATGTGA AFE_3220 2900879 - 2901778 + | hypothetical protein TERM 2316 2901833 - 2901855 + G 74 -11.2 -3.55761 | CTGCTGTCCGGGAAC GCCAACCGGC GGA GCTGGATGGC TTTGACCGATCCCTC AFE_3221 2901797 - 2902708 + | magnesium and cobalt transport protein, putative AFE_3222 2903859 - 2902789 - | ADP-ribosylglycohydrolase family protein TERM 2317 2903956 - 2903989 + H 76 -5.2 -4.74013 | gap 1, opp_overlap 2903956 2903955, overlap 2903956 TCAAACCAGTTAAAT CC-GCCCTGCACCCG TTATT TGAGTGCAGGACAGG TTTTGTATCTTTCCG AFE_3223 2904250 - 2904702 + | WrbA family protein AFE_3224 2904706 - 2905578 + | pirin family protein AFE_3225 2905627 - 2905788 + | hypothetical protein AFE_3227 2905800 - 2906462 + | hypothetical protein TERM 2318 2906671 - 2906683 + T 93 -4.7 -5.55664 | overlap 2906672 TCACACTGGTCAGCA GGGGC AAA GCCCG TTTTTTTGGTGGTGA TERM 2319 2906672 - 2906682 + T 74 -8.2 -3.92314 | overlap 2906671 CACACTGGTCAGCAG GGGC AAA GCCC GTTTTTTTGGTGGTG AFE_3228 2907066 - 2906887 - | hypothetical protein TERM 2320 2907063 - 2907081 + g 72 -3 -4.82901 | overlap 2907066 AATAATCCTCCTCAT TCACCCCA TTC TGGCGGGA TTTTTATGAGAAAAG AFE_3229 2907212 - 2909518 + | TonB-dependent receptor TERM 2321 2909759 - 2909790 + G 93 -16.6 -3.28712 | gap 1, overlap 2909760 GGTGACCCATGTGTT G-CCCACGGGGCGGA TCG TCAGCCCCGTGGGTC TTGTCAACGGCGCCC TERM 2322 2909760 - 2909788 + G 95 -20.3 -3.21276 | overlap 2909759 GTGACCCATGTGTTG CCCACGGGGCGGA TCG TCAGCCCCGTGGG TCTTGTCAACGGCGC TERM 2323 2909963 - 2909942 - g 100 -9.3 -4.96848 | CGCCGCATACAAAAA GGGTGCCCC AAAA GAGGCCCCC CTGCCTACGGACGCC TERM 2324 2910695 - 2910714 + G 70 -12.2 -2.88544 | overlap 2910679 CTTTGTGGCCAACGC CGGCAACA ACGA TGTTGCCG TCTATAACGATCAGA AFE_3230 2909604 - 2912399 + | hypothetical protein TERM 2325 2912906 - 2912921 + G 75 -2.6 -5.00884 | gap 1 GTTTTACTGTGCCAC CCATCTG TGC CA-ATGG TTTTTTCCGCAAGGT AFE_3232 2912850 - 2912948 + | hypothetical protein TERM 2326 2913307 - 2913281 - T 74 -10.2 -3.49951 | TATAGCCGTACACAA TTTCTCGGTACG CCC CCCACCGAGAAA TCAGCGATTGTCGAG AFE_3234 2913916 - 2913326 - | hypothetical protein AFE_3235 2914787 - 2914011 - | ABC-2 type transporter, permease protein, NodJ family TERM 2327 2914811 - 2914856 + r 93 -16.2 -2.87564 | gap 1, opp_overlap 2914834 2914836 TTCCTCCCGCAGATC GCGTCCCGTCAGGC-GCAGGA ACACA TCCTCCAGGCTGGCGGGACGC TGTATCCAGCGATAG AFE_3236 2915716 - 2914787 - | ABC transporter, ATP-binding protein, NodI family AFE_3237 2916365 - 2915697 - | hypothetical protein AFE_3238 2916742 - 2916425 - | ferredoxin, putative TERM 2328 2917382 - 2917356 - g 71 -7.2 -4.24711 | opp_overlap 2917371 2917372 2917379, overlap 2917371 2917372 CAAAAGCGGAAGAAA TGGGCGCGGAAA AAC TCCCCATGCCCA TCCGCCTGGCGATGG TERM 2329 2917371 - 2917400 + G 83 -4.2 -5.03145 | opp_overlap 2917356 2917371 2917372, overlap 2917372 2917379 TGGGCGCGGAAAAAC TCCCCATGCCCA TCCGCC TGGCGATGGGGG TTTTTTCGAAGGTTC AFE_3239 2916815 - 2917441 + | Coq7 family protein AFE_3240 2917973 - 2917446 - | Rrf2 family protein TERM 2330 2917756 - 2917743 - GT 80 -9.5 -3.96148 | GGGGCGCAGGACAAA GCCGC CGCC GCGGC CCTTGAAGGAATCGA AFE_3241 2918370 - 2917945 - | OsmC/Ohr family protein trpC 2919232 - 2918441 - | indole-3-glycerol phosphate synthase trpD 2920252 - 2919236 - | anthranilate phosphoribosyltransferase pabA 2920821 - 2920249 - | para-aminobenzoate synthase glutamine amidotransferase component II trpE 2922322 - 2920805 - | anthranilate synthase component I gph-2 2923116 - 2922433 - | phosphoglycolate phosphatase TERM 2331 2922566 - 2922518 - G 72 -11.6 -3.29144 | gap 1, opp_overlap 2922556 TCATCGCCGTTATAA CCGTAGGTCACGCAGGCAACGGG CATA CCCGCCGCCCGCGCCGCCT-CAG CGTCGTTACGTGAAT rpe 2923782 - 2923120 - | ribulose-phosphate 3-epimerase TERM 2332 2923825 - 2923796 - R 91 -12.1 -4.07687 | gap 1, overlap 2923798 2923799 ATTTTGCCTCCAAAA CAGGGCGAGAGCGC CAT GCGCCCTCGC-CAG TCGACCGGTAGGTAG TERM 2333 2923824 - 2923798 - R 100 -15.8 -3.63744 | overlap 2923796 2923799 TTTGCCTCCAAAACA GGGCGAGAGCGC CAT GCGCCCTCGCCA GTCGACCGGTAGGTA TERM 2334 2923823 - 2923799 - R 100 -19.3 -2.78032 | overlap 2923798 2923796 TTGCCTCCAAAACAG GGCGAGAGCGC CAT GCGCCCTCGCC AGTCGACCGGTAGGT fba 2924917 - 2923847 - | fructose-bisphosphate aldolase, class II pykA 2926464 - 2925025 - | pyruvate kinase II pgk 2927666 - 2926461 - | phosphoglycerate kinase gap 2928697 - 2927681 - | glyceraldehyde-3-phosphate dehydrogenase, type I tkt-2 2930723 - 2928732 - | transketolase TERM 2335 2930613 - 2930657 + g 100 -12.2 -4.4267 | gap 1, opp_overlap 2930612, overlap 2930615 GTCGTTCCACAGCAC TTCGGCGATGTCCGCCATGCC CATG GGCATGCCGGG-ATGGCCGGA TTTTGCCTTTTCCAC glpX 2931699 - 2930755 - | fructose-1,6-bisphosphatase, class II AFE_3254 2932585 - 2931758 - | inositol monophosphatase family protein AFE_3255 2933046 - 2932609 - | hypothetical protein AFE_3256 2933128 - 2932970 - | hypothetical protein AFE_3257 2933114 - 2933839 + | conserved hypothetical protein TIGR00046 TERM 2336 2934073 - 2934090 + G 75 -7.7 -4.25104 | gap 1 ACGTCGTCGAAGACC TGCGCGCC CGT GGCGC-CA TTTTCGTCGAGGAGC ispH 2933928 - 2934878 + | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase AFE_3259 2936377 - 2934917 - | DNA recombination protein RmuC, putative TERM 2337 2935705 - 2935740 + g 95 -15.4 -3.78775 | gap 1 CCCAGCGCCCCCGGG CCGCGG-GCTGGCGCAG GGC CTTCACCAGCGCCGCGG TTTCCTGATGCAGGC mscL 2936939 - 2936484 - | large conductance mechanosensitive channel protein TERM 2338 2936788 - 2936776 - G 81 -7.7 -4.59109 | opp_overlap 2936786, overlap 2936780 TAGAGGTTGGAAAAA TCGAC CCT GTCGA GCAGCATGCCGATAG AFE_3261 2937562 - 2937050 - | lipoprotein, putative TERM 2339 2937203 - 2937177 - G 85 -3.4 -5.44119 | overlap 2937178 2937179 GCCAGGTCAAAAAAA CGTGCCGCCTGC GCC GCCGGCGTGGCG TAGGCACCCTCCTGG AFE_3262 2940706 - 2937596 - | transporter, AcrB/AcrD/AcrF family TERM 2340 2940642 - 2940631 - G 83 -2.2 -5.26875 | TCGTGAAGGAAAAAA TGCC ATAG AGCA CCAACCCGAGGACCA AFE_3263 2941025 - 2942251 + | ISAfe3, transposase AFE_3264 2943389 - 2942256 - | efflux transporter, RND family, MFP subunit AFE_3265 2944816 - 2943386 - | outer membrane efflux protein AFE_3266 2945352 - 2945212 - | hypothetical protein AFE_3267 2945909 - 2945466 - | YaiI/YqxD family protein AFE_3268 2946113 - 2946406 + | prevent-host-death family protein AFE_3269 2946422 - 2946844 + | conserved hypothetical protein TIGR00305 TERM 2341 2948214 - 2948182 - g 73 -10.5 -3.59979 | opp_overlap 2948210 TGCTTCGAGTTCAAA TTCGTCCCGCCCGAA AAG CTCGTGCAGGCCGAA AGATCGGTATTCAAC AFE_3270 2947117 - 2948676 + | hypothetical protein TERM 2342 2948705 - 2948735 + T 78 -13.3 -2.53213 | opp_overlap 2948696 2948693 AACCCATCATTCCAC CGGGCCTGCGC AAAAAAGCC GCGTAGGCCCG TGAATTCAGGCGTTA AFE_3271 2949847 - 2949653 - | hypothetical protein TERM 2343 2950459 - 2950471 + rH 74 -3.3 -4.8622 | opp_overlap 2950449, overlap 2950469 GAGAACCTGCGAGAC GTCAG GAT CAGAC TTTTTGCTTAGGAAA AFE_3272 2950876 - 2950598 - | hypothetical protein TERM 2344 2951057 - 2951045 - gH 73 -4.8 -4.63184 | AACGGATCTGAAAAA CTGG CGTGC CCAG CAGCTAAAGGAAATG AFE_3273 2950860 - 2951315 + | hypothetical protein AFE_3274 2951316 - 2952053 + | transcriptional regulator OmpR, putative AFE_3275 2952059 - 2953321 + | osmolarity sensor protein EnvZ, putative TERM 2345 2953315 - 2953339 + T 75 -11.4 -3.34398 | overlap 2953314 AGTCCTGCCTCCGGC GCCCTGAGGC CGGGC GCATCAGGGC TGTTTGGGCGCCGCC AFE_3276 2953659 - 2953333 - | hypothetical protein argH 2953803 - 2955191 + | argininosuccinate lyase AFE_3278 2955188 - 2955373 + | lipoprotein, putative TERM 2346 2955648 - 2955664 + G 80 -3.7 -5.07567 | overlap 2955638 2955630 GCTGCGGGCGGGCGG CGATG CCGGCAC CATCG TTTTTTCCGGTGTCG lysA 2955370 - 2956629 + | diaminopimelate decarboxylase AFE_3280 2956771 - 2957322 + | hypothetical protein hynD 2957354 - 2957830 + | hydrogenase maturation protease hynH 2957823 - 2958233 + | hydrogenase expression protein, putative TERM 2347 2958545 - 2958501 - g 81 -15.5 -2.90075 | TGGCCTTCAACGACA CCCTTCAGGCCGCCGCCGGGG AGG CCGCCGAGGCGGCCCGGAAGG AGGCCATGCGCAAGG TERM 2348 2959154 - 2959193 + G 76 -9.2 -4.09685 | opp_overlap 2959138 2959139 GGCGGATTTTACCGG CCTCTGCCCGCAGCCA CCGGCCAC TGGCCGCGCGGAGAGG TTTTGGGCGGTGCGG hynS 2958233 - 2959333 + | [Ni/Fe] hydrogenase, small subunit isp1 2959323 - 2959988 + | hypothetical protein TERM 2349 2960279 - 2960293 + G 83 -4.2 -5.09173 | TACAAACGGGAAACT GGGC CTTTTGC GCCC TTTTTTCGCCTCTTC isp2 2959985 - 2961346 + | iron-sulfur cluster-binding protein TERM 2350 2962790 - 2962821 + G 76 -10 -3.72576 | overlap 2962791 GCCCTCTGGGAACCC TCCACCTGGCCCGC CGAG GCGCGCGGGGTGGG TTTCATGGAGGCACC TERM 2351 2962915 - 2962891 - g 70 -12.1 -2.8474 | overlap 2962888 TCTCATCGACAACTA CCAGGCGGTGG TAC CCAGCACCTGG AATGCCGGCCCGCGG hynL 2961350 - 2963107 + | [Ni/Fe] hydrogenase, large subunit hypA-2 2963176 - 2963517 + | hydrogenase nickel insertion protein HypA TERM 2352 2963704 - 2963690 - g 73 -10 -3.61715 | overlap 2963693 CATTCTGGCCAAGAA TCAGCG CCA CGCTGA CGCCAACCGCCGCCA hypB-2 2963517 - 2964317 + | hydrogenase accessory protein HypB hypC-2 2964332 - 2964577 + | hydrogenase assembly chaperone HypC TERM 2353 2965467 - 2965490 + G 76 -5.3 -4.68424 | gap 2, opp_overlap 2965458 CATCAACGCCGCCTA CGGCGACTTCG ACAC CGA-G-CGCCG TTTTTCCATCCCTTA hypD-2 2964574 - 2965686 + | hydrogenase expression/formation protein HypD AFE_3291 2965876 - 2966760 + | NAD-dependent epimerase/dehydratase family protein gmd-2 2966757 - 2967788 + | GDP-mannose 4,6-dehydratase TERM 2354 2968085 - 2968062 - g 80 -15.2 -3.01712 | CGGTGGGCCGCAACA CGGCGCCGGC CATC GCCGCCGCCG CCCTGCAGGCGGAAG TERM 2355 2968362 - 2968340 - g 70 -4.6 -4.56597 | opp_overlap 2968340 2968341, overlap 2968341 CGCTTTGTCGAAAAA CCCGATGCGG CTA CCGCTGCGGC TTTTCTGGCCCAGGG TERM 2356 2968412 - 2968423 + G 74 -3.6 -4.84017 | overlap 2968404 2968407 GGCATGTTCTGCTTC CGCG CGGA TGCG TTTTTATCCGCCCTT AFE_3293 2967785 - 2969224 + | mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase rfbC 2969804 - 2969256 - | dTDP-4-dehydrorhamnose 3,5-epimerase rfbA 2970685 - 2969801 - | glucose-1-phosphate thymidylyltransferase TERM 2357 2970187 - 2970199 + g 80 -3.3 -5.06414 | overlap 2970188 CCGCGTAGCACGAGC GCGGA ACG TCCGG TTTTTCTTCGAGACC TERM 2358 2971208 - 2971225 + G 74 -4 -4.83169 | TGGTCAGCGCCCTCA GCCCGG ATGTCC CCGTGC TTTTTCTGGGCCGCT AFE_3296 2970883 - 2972259 + | major facilitator family transporter AFE_3297 2972965 - 2972273 - | TonB family protein hemB 2973926 - 2972934 - | delta-aminolevulinic acid dehydratase TERM 2359 2973455 - 2973468 + gr 77 -8.1 -4.09685 | opp_overlap 2973454 CCGCATAAGAAATGG CCTGC CGCT GCAGG TTTTCCAGGGTGGCG TERM 2360 2973875 - 2973855 - GR 81 -12.6 -3.05463 | overlap 2973857 ATGGTGTTCACGCAA CATCCGGC GCATG GCCGGATG GCGACGCAGGCGTCG hemD 2974782 - 2973994 - | uroporphyrinogen-III synthase TERM 2361 2974383 - 2974369 - G 77 -11.4 -3.58343 | CTGATCACCGGCAAA CAGCGC GAT GCGCTG CCCACGCACGTCCAG hemC 2975699 - 2974779 - | porphobilinogen deaminase AFE_3301 2976020 - 2975745 - | competence protein ComEA helix-hairpin-helix repeat protein AFE_3302 2976510 - 2976115 - | HIT family protein hemL 2977799 - 2976507 - | glutamate-1-semialdehyde-2,1-aminomutase thiE 2978455 - 2977802 - | thiamine-phosphate pyrophosphorylase TERM 2362 2978054 - 2978043 - G 80 -3.6 -5.07567 | GGAGAGGCGAAAAAA GACC CGAA GGCC ACGTAGTCCGCCCCC TERM 2363 2978279 - 2978242 - G 77 -8.3 -4.3129 | gap 1 CATTGACGACGAAAA GGGCGCCGTACTGCGCAC AGA GTTCCC-GCAAGGCGCCC GCCTGCATGCGCCGT AFE_3305 2979275 - 2978442 - | phosphomethylpyrimidine kinase, putative AFE_3306 2979452 - 2979330 - | hypothetical protein AFE_3307 2980356 - 2979571 - | oxidoreductase, short-chain dehydrogenase/reductase family TERM 2364 2980756 - 2980732 - g 73 -9.9 -3.59583 | AGAATTATGGTGAAA CGCCCTTCCCG TTG CGGGAAGCGAG CCCACTCCGCTGCCG AFE_3308 2980590 - 2980829 + | hypothetical protein TERM 2365 2981480 - 2981509 + G 75 -2.1 -5.00616 | CAGCGCTACCGTAAG CTGGATGCCCT GCTCATCG ACGACATCCAG TTTTTTGCGGGCAAG dnaA 2980841 - 2982199 + | chromosomal replication initiator protein DnaA