TransTermHP v2.07 (built on Jan 21 2009) 25 bins; sample size is 20000000 --pval-conf=/fs/szasmg2/carlk/TTupdate2/expterm.dat --gc=-2.3 --au=-0.9 --gu=1.3 --mm=3.5 --gap=6 --max-len=59 --min-stem=4 --max-loop=13 --min-loop=3 --uwin-length=6 --uwin-require=3 --max-hp-score=-2 --max-tail-score=-2.5 --loop-penalty=1,2,3,4,5,6,7,8,9,10,11 --start-cut=0 --end-cut=25 Genes: 0.41008 %AT, 4932359 nt, 39051 terms. Intergenic: 0.457917 %AT, H2T: 461020 nt, 3971 terms; T2T: 132659 nt, 2753 terms; H2H: 194239 nt, 3372 terms. Each terminator entry starts in column 3 and is of the form: term # start - end +/- regionconf hp tail | notes Followed by the sequence of the 5' tail, 5' stem, loop, 3' stem, and 3' tail. Genes are interspersed, and start the first column. SEQUENCE gi|94967031|ref|NC_008009.1| Acidobacteria bacterium Ellin345, complete genome (length 5650368) Acid345_0001 33 - 1418 + | chromosomal replication initiator protein DnaA TERM 1 1436 - 1421 - f 78 -11.8 -3.25192 | opp_overlap 1421, overlap 1419 TCTAAGCGGATAAGA CGCGGC TTCG GCCGCG TTTTCCACTTCTGGA TERM 2 1421 - 1436 + F 91 -11.8 -4.21936 | opp_overlap 1421 1419 TCTAAGCGGATAAGA CGCGGC TTCG GCCGCG TTTTCCACTTCTGGA TERM 3 1729 - 1694 - f 70 -5.4 -4.39989 | gap 1, overlap 1686 AGCAAAGCAGTAAAA CCGGGTCCAACCGAAGC GCC ACTCTGGTTG-ACGCGG TTAGAAACCAGGGGG Acid345_0002 1811 - 2926 + | DNA polymerase III, beta subunit TERM 4 2949 - 2968 + F 100 -13.6 -4.55128 | TGTTGGATTTTGGGG TCGCTGCC TGCG GGCAGCGA TTTTCATTTGGCGGT Acid345_0003 2996 - 3931 + | glucokinase Acid345_0004 3928 - 4977 + | glutamine-fructose-6-phosphate transaminase (isomerizing) Acid345_0005 4984 - 6249 + | major facilitator transporter Acid345_0006 6357 - 6773 + | large conductance mechanosensitive channel protein Acid345_0007 7464 - 7066 - | hypothetical protein TERM 5 9445 - 9458 + G 70 -3.7 -4.56597 | opp_overlap 9446, overlap 9425 9446 AGGCGTTTGTGAATG AGCGC CTGG GCGCG TTTTTCGAGCAGAAC Acid345_0008 8277 - 10916 + | DNA gyrase subunit B TERM 6 10940 - 10960 + F 100 -16.1 -4.2803 | opp_overlap 10938 10937 10935 CTCTGCAAAAGATTT GGCCCGCCG CTT TGGCGGGCC TTTTGCATTGCGATC TERM 7 12215 - 12189 - g 71 -13 -2.64126 | overlap 12188 12191 AATTACACCGACAAT CACCTGGGCGAA GCA CTCGGCCAGGTG TACGTGAAGAGTGCA TERM 8 12870 - 12851 - g 79 -12.8 -3.28924 | CACGCTCGGCGAGAA CACCGCCG ACAA CGGCGGCG TGAGGGTTGCGCTGA Acid345_0009 11118 - 13151 + | endothelin-converting protein 1 TERM 9 13177 - 13217 + F 100 -14 -4.63932 | opp_overlap 13177, overlap 13215 GTTGTAGTTCTAAAA GCGTCCAGTGAGCAGTGC ATCAA GCGCTCTGCACTGGACGC TTTTATTCAGCGCTA TERM 10 13217 - 13177 - f 88 -11.3 -4.11216 | opp_overlap 13177 13215 GTTGTAGTTCTAAAA GCGTCCAGTG-AGCAGTGC ATCAA GCGCT-CTGCACTGGACGC TTTTATTCAGCGCTA Acid345_0010 13474 - 13911 + | hypothetical protein Acid345_0011 14112 - 15593 + | hypothetical protein TERM 11 15607 - 15634 + F 100 -15.6 -3.45023 | overlap 15612 AGAGAGTTGCAGTGT GAGGAGCGCGGC TTCG GCCGCGCTTTTC TTGTGCTCGTGATAA TERM 12 15612 - 15629 + F 100 -14.1 -4.81814 | overlap 15607 GTTGCAGTGTGAGGA GCGCGGC TTCG GCCGCGC TTTTCTTGTGCTCGT TERM 13 16082 - 16121 + G 85 -10.6 -4.31688 | gap 1 TCCTGATTATTCGCA GCGCCTTGCTGCAGCCGGA TGT TCCGGCCGCT-TGGGGCGC TTTTGGATTGATCTT TERM 14 16463 - 16484 + G 76 -2.9 -5.02074 | overlap 16465 AACTTGCCAGTATGA GTTCCTATC GTTT GATCGGATC TTTTTTCCGCGATAA Acid345_0012 15673 - 16821 + | hypothetical protein TERM 15 17460 - 17420 - g 73 -11.2 -3.36749 | gap 1, opp_overlap 17429 17431, overlap 17421 TATCGGGAACAGCAA CCGAGCTATGACG-AACCG GCGC CGGTTGCGTCTTCGCTCGA CGACTCGCCCAATCC TERM 16 17459 - 17421 - g 71 -12.5 -2.61728 | gap 1, opp_overlap 17429 17431, overlap 17420 ATCGGGAACAGCAAC CGAGCTATGACG-AACCG GCGC CGGTTGCGTCTTCGCTCG ACGACTCGCCCAATC Acid345_0013 16925 - 17656 + | hypothetical protein TERM 17 17674 - 17701 + T 100 -9.9 -4.87291 | gap 1, opp_overlap 17673 17676, overlap 17677 GTGCACGTAAACAAC G-AGGGCCACCC AAAGC GGGTGGCCTTAC TTTTTCCTTCGGCTA TERM 18 17698 - 17676 - T 72 -11.2 -3.03829 | opp_overlap 17674 17677, overlap 17673 GCACGTAAACAACGA GGGCCACCCA AAG CGGGTGGCCT TACTTTTTCCTTCGG TERM 19 17677 - 17697 + T 100 -14 -3.88182 | opp_overlap 17676 17673, overlap 17674 CACGTAAACAACGAG GGCCACCC AAAGC GGGTGGCC TTACTTTTTCCTTCG TERM 20 17750 - 17733 - T 78 -6.3 -4.71418 | gap 1, overlap 17736 17738 AACATTGAAAACAAA GAAGTGCC TGC GGCAC-TC AGACGTGGAGGTCGA TERM 21 17748 - 17736 - T 85 -9.1 -4.44301 | overlap 17733 17738 ATTGAAAACAAAGAA GTGCC TGC GGCAC TCAGACGTGGAGGTC Acid345_0014 18162 - 17749 - | hypothetical protein Acid345_0015 18869 - 18300 - | TetR family transcriptional regulator TERM 22 18615 - 18635 + g 86 -3.2 -5.63517 | GAATGCGAGAGTGAA TCCGAGGG GCGTA CGCTTGGA TTTTTTCTTTGCCGC TERM 23 18939 - 18955 + H 71 -10.9 -3.28712 | overlap 18918 GGCAGTTTTCCATTT CCGAACA GTA TGTTCGG TTATGCGAGACGGGA Acid345_0016 18980 - 19936 + | methylase involved in ubiquinone/menaquinone biosynthesis-like Acid345_0017 20291 - 19887 - | hypothetical protein Acid345_0018 20559 - 20954 + | 50S ribosomal protein L21P TERM 24 20947 - 20937 - f 87 -8.2 -4.55295 | overlap 20939 CGTTCGACAAAGAAA GCCG CAG CGGC TGAGTAAAGGATTAA rpmA 20966 - 21226 + | 50S ribosomal protein L27 TERM 25 21280 - 21299 + F 100 -15 -4.55798 | opp_overlap 21279 21278 CCCGCTTAGAGAATG GGCCTCGC TGCG GCGAGGCC TTTTCGTTTGCAATA obgE 21328 - 22425 + | GTPase ObgE TERM 26 22609 - 22625 + G 88 -11.5 -4.23045 | TGATTTCGCTGGCGA CCGCGGG GGA TCCGCGG TTTATTCCGTCATTG Acid345_0021 22422 - 23198 + | nicotinate-nucleotide adenylyltransferase Acid345_0022 23235 - 23726 + | Iojap-related protein TERM 27 23749 - 23786 + G 82 -10.5 -4.12397 | gap 1, opp_overlap 23749 23747 23739 CACAATGAGCGAACA GGGCGCAGC-CTCGGC GAAAGCG GCAGAGAGCAGCGCCC TTTCTGCTTATGTGG Acid345_0023 23738 - 24697 + | sigma-54 dependent trancsriptional regulator Acid345_0024 24743 - 25183 + | hypothetical protein Acid345_0025 25183 - 25749 + | hypothetical protein Acid345_0026 26500 - 25751 - | short-chain dehydrogenase/reductase SDR Acid345_0027 26917 - 26594 - | ArsR family transcriptional regulator Acid345_0028 27088 - 27312 + | 50S ribosomal protein L31P TERM 28 27348 - 27329 - T 95 -15 -3.37493 | opp_overlap 27329 TTCGGAACACAGGAA GCCTCCGC GCAG GCGGAGGC TTTTCTTATGCTTTG TERM 29 27329 - 27348 + T 100 -15 -4.86902 | opp_overlap 27329 TTCGGAACACAGGAA GCCTCCGC GCAG GCGGAGGC TTTTCTTATGCTTTG Acid345_0029 27635 - 27354 - | hypothetical protein Acid345_0030 27676 - 28788 + | dihydrouridine synthase TIM-barrel protein nifR3 Acid345_0031 29210 - 28785 - | hypothetical protein Acid345_0032 29312 - 29611 + | hypothetical protein TERM 30 29667 - 29628 - f 89 -16.7 -2.53911 | opp_overlap 29632 29634 29639, overlap 29632 29634 29639 CGAACCCTCAAGGGA GAAAGAGAAAACACCGG TGGGTG CCGGTGTTTTCTGTTTC ACAGATAGGAAACAC TERM 31 29663 - 29632 - f 90 -11.7 -3.97368 | opp_overlap 29632 29634 29639, overlap 29628 29634 29639 CCCTCAAGGGAGAAA GAGAAAACACCGG TGGGTG CCGGTGTTTTCTG TTTCACAGATAGGAA TERM 32 29632 - 29663 + F 81 -12.4 -3.55444 | opp_overlap 29628 29632 29634 29639, overlap 29634 29639 CCCTCAAGGGAGAAA GAGAAAACACCGGT GGGT GCCGGTGTTTTCTG TTTCACAGATAGGAA TERM 33 29634 - 29661 + F 95 -15 -3.35597 | opp_overlap 29634 29632 29628 29639, overlap 29632 29639 CTCAAGGGAGAAAGA GAAAACACCGGT GGGT GCCGGTGTTTTC TGTTTCACAGATAGG TERM 34 29661 - 29634 - f 95 -14.3 -3.57808 | opp_overlap 29632 29634 29639, overlap 29632 29628 29639 CTCAAGGGAGAAAGA GAAAACACCGG TGGGTG CCGGTGTTTTC TGTTTCACAGATAGG TERM 35 29639 - 29656 + F 93 -9.1 -4.78848 | opp_overlap 29634 29632 29628 29639, overlap 29634 29632 GGGAGAAAGAGAAAA CACCGGT GGGT GCCGGTG TTTTCTGTTTCACAG TERM 36 29656 - 29639 - f 95 -8.4 -4.84918 | opp_overlap 29639 29634 29632, overlap 29634 29632 29628 GGGAGAAAGAGAAAA CACCGG TGGGTG CCGGTG TTTTCTGTTTCACAG Acid345_0033 29683 - 30369 + | HAD family hydrolase Acid345_0034 30665 - 30366 - | type I antifreeze protein Acid345_0035 30752 - 31615 + | hypothetical protein Acid345_0036 32092 - 31619 - | L-asparaginase Acid345_0037 32449 - 34701 + | serine/threonine protein kinase TERM 37 34722 - 34754 + T 77 -8.4 -4.1711 | opp_overlap 34725 34729, overlap 34724 34725 34729 AAGAAGTCTTGGTAA CGAGAAAGGCGCGA GAGGA TCGCGCCTTTCGTA TTTATTGAGCCTGCT TERM 38 34724 - 34752 + T 89 -13.2 -3.68324 | opp_overlap 34725 34729, overlap 34722 34725 34729 GAAGTCTTGGTAACG AGAAAGGCGCGA GAGGA TCGCGCCTTTCG TATTTATTGAGCCTG TERM 39 34751 - 34725 - T 90 -16.7 -2.71263 | opp_overlap 34724 34722 34725 34729, overlap 34729 AAGTCTTGGTAACGA GAAAGGCGCGA GAGGA TCGCGCCTTTC GTATTTATTGAGCCT TERM 40 34725 - 34751 + T 90 -16.7 -2.80512 | opp_overlap 34725 34729, overlap 34724 34722 34729 AAGTCTTGGTAACGA GAAAGGCGCGA GAGGA TCGCGCCTTTC GTATTTATTGAGCCT TERM 41 34747 - 34729 - T 90 -11.7 -4.05446 | opp_overlap 34725 34724 34722 34729, overlap 34725 CTTGGTAACGAGAAA GGCGCGA GAGGA TCGCGCC TTTCGTATTTATTGA TERM 42 34729 - 34747 + T 91 -11.7 -4.07859 | opp_overlap 34729 34725, overlap 34725 34724 34722 CTTGGTAACGAGAAA GGCGCGA GAGGA TCGCGCC TTTCGTATTTATTGA Acid345_0038 35844 - 34756 - | TonB-like protein Acid345_0039 36707 - 35844 - | beta-lactamase-like protein TERM 43 36721 - 36737 + r 72 -2.2 -4.90302 | overlap 36723 ATGAAGCGTCTAGGG TTTCGC TCTCT GCGACA TTTGTTTTATTGATA Acid345_0040 37687 - 36791 - | chromosome segregation DNA-binding protein Acid345_0041 38520 - 37699 - | chromosome segregation ATPase TERM 44 38752 - 38797 + r 95 -14.8 -3.53733 | gap 1, opp_overlap 38755, overlap 38756 AAGGATGTTTTGGAT GAACCGGGGACGCTGTG-TCT AAAGG GGATCACAGCGGCCCCGTTTC TATTTCTGAGCTCGC TERM 45 38756 - 38793 + r 100 -14.2 -4.40003 | gap 1, opp_overlap 38755, overlap 38752 ATGTTTTGGATGAAC CGGGGACGCTGTG-TCT AAAGG GGATCACAGCGGCCCCG TTTCTATTTCTGAGC Acid345_0042 39456 - 38797 - | methyltransferase GidB TERM 46 39250 - 39234 - G 73 -12.3 -3.08679 | CCGGGTCAGGGAACA GTTCGCG GGC CGCGAAC AGCGATTCGCCAAAA Acid345_0043 39495 - 40175 + | hypothetical protein TERM 47 40196 - 40216 + F 100 -13.3 -5.26875 | opp_overlap 40195 TCCACAAAGAACGAC GCCGGGAGA ACC TCTTCCGGC TTTTTTAGTTGGAGA Acid345_0044 40290 - 40745 + | hypothetical protein Acid345_0045 41849 - 40785 - | adenosine deaminase TERM 48 40998 - 40982 - G 71 -7.9 -4.07885 | CACCGGCGTCGAAAA GCTTCCG CAC CGGATGC TCGGCGAGCGCTCGG TERM 49 41834 - 41812 - G 100 -15.6 -3.93401 | opp_overlap 41813, overlap 41806 CGGATAAATGAAGAA GGCCCGGAGA GCT TCTCCGAGCC TGTAGAACTATTCAT Acid345_0046 43299 - 41854 - | amino acid permease-associated region TERM 50 43607 - 43564 - R 71 -10.5 -3.30159 | gap 3, overlap 43565 TGAATCGCGGGAGAA TCTT-ACCCTGCCG-CCG-CGC ATT GCGCCAATCGGCAGGGTAAAGA TGTGCCACTTCGAAA TERM 51 43605 - 43565 - R 72 -12 -2.57881 | gap 2, overlap 43564 GAATCGCGGGAGAAT CTTACCCTGCCG-CCG-CGC ATT GCGCCAATCGGCAGGGTAAA GATGTGCCACTTCGA Acid345_0047 46505 - 43956 - | ATP-dependent DNA helicase Rep TERM 52 44309 - 44323 + g 93 -8.5 -4.77165 | TGCTGTACGAGTCAT CGCCG AACAC CGGCG TTTTCTTCTGCGGCG Acid345_0048 47653 - 46847 - | hypothetical protein Acid345_0049 48029 - 47595 - | hypothetical protein Acid345_0050 48958 - 48026 - | polysaccharide deacetylase TERM 53 48514 - 48497 - G 72 -4.8 -4.56775 | gap 1, opp_overlap 48497 48498, overlap 48498 ATGCTCCTTCAAAAA CGCG-CG CATCC CGTCGCG CTTCTCTTTCGTGTT TERM 54 48565 - 48545 - G 78 -3.9 -5.00616 | overlap 48547 48557 CCCCTCTTTAAAAAA CGGAAACCG AAA CAGCTTCTG AAACTGCGAGTACCT Acid345_0051 49043 - 50599 + | glutamyl-tRNA synthetase / glutamate--tRNA(Gln) ligase Acid345_0052 51200 - 50853 - | hypothetical protein Acid345_0053 51559 - 51200 - | hypothetical protein Acid345_0054 51909 - 51556 - | hypothetical protein Acid345_0055 52826 - 51930 - | hypothetical protein TERM 55 52492 - 52518 + g 75 -9.4 -3.83026 | opp_overlap 52490 CCGTAATACCCAATC GCCGACGCTG AAATCAG CACCGTCGGC TTTCCTGTCCGGCGA Acid345_0056 55080 - 52837 - | peptidase S9B, dipeptidylpeptidase IV-like Acid345_0057 56361 - 55120 - | UvrB/UvrC protein TERM 56 55298 - 55319 + g 81 -8.7 -4.30844 | overlap 55299 AGTTCACCCTTGTCG TCGGTGAGA AAGA TCTCGCCGG TTTTGCTCGTCCGGT TERM 57 56567 - 56549 - R 76 -3 -5.11836 | overlap 56551 ATATTCAAAACAAAA GGGTTGCG GCT CGCAAAGC TCGGGACAAAAGGTT TERM 58 56630 - 56670 + r 72 -11.9 -2.71364 | opp_overlap 56624 GTCGAGAAAGCGTTG GGGTCAGC-GGCGATGGGC GCTGA GCCCGG-GCCTGCTGACCC TGATTGGCACAGTAG Acid345_0058 57220 - 56939 - | hypothetical protein Acid345_0059 58062 - 57238 - | hypothetical protein TERM 59 57289 - 57305 + g 70 -2.1 -4.81852 | opp_overlap 57289 TTTCCAAACTAAGAC GCGGTCA CGC TGCACGC TTTTCTTGATTCTCG TERM 60 58035 - 58050 + g 85 -2.6 -5.5112 | gap 1 CGTATTCGAGAATCT GTGTATC CAA GA-ACAC TTTTTTCTTCATGGA Acid345_0060 58854 - 58072 - | DNA replication protein, DNAC-like TERM 61 58775 - 58785 + g 70 -2.4 -4.72272 | opp_overlap 58768 CAATCACAGCGCACC GCGC GCG GCCC TTTTTCGTCCGCCAC TERM 62 58922 - 58905 - H 70 -9.9 -3.32963 | ATCCTGAGCGGAGAA TCCGCAT AACG ATGCGGA TTCGGAGTTGAAGGA Acid345_0061 59076 - 59360 + | hypothetical protein Acid345_0062 59402 - 60796 + | tRNA(Ile)-lysidine synthetase-like Acid345_0063 60793 - 61347 + | phosphoribosyltransferase Acid345_0064 61544 - 63457 + | FtsH peptidase TERM 63 63485 - 63504 + F 100 -13.6 -5.42259 | opp_overlap 63485 CTGCTTCACAAAAAA CCCTGCTC CCTG GAGCAGGG TTTTTTTCGGCCTGA TERM 64 63504 - 63485 - f 100 -13.6 -5.24129 | opp_overlap 63485 CTGCTTCACAAAAAA CCCTGCTC CCTG GAGCAGGG TTTTTTTCGGCCTGA TERM 65 64028 - 63996 - f 70 -9.8 -3.34398 | gap 1, overlap 63994 GTGGTTCCTGAAAGA GGTTCGGCATTCGCC TCCT GGCGAA-GCCGGGCC ATAGCGAATTGGCTC TERM 66 64240 - 64183 - g 90 -11.2 -4.34486 | gap 2, opp_overlap 64237, overlap 64184 ATCAACAACAAACAA GCGGCCGCGAAGACTTTCGTCGCCAGCG ACTG CGCTCGCGACGGCGG-CTTCGCG-CCGG AAACTGGTGGTTCCG TERM 67 64239 - 64184 - g 86 -14.7 -3.19065 | gap 2, opp_overlap 64237, overlap 64183 TCAACAACAAACAAG CGGCCGCGAAGACTTTCGTCGCCAGCG ACTG CGCTCGCGACGGCGG-CTTCGCG-CCG GAAACTGGTGGTTCC Acid345_0065 64148 - 64924 + | Crp/FNR family transcriptional regulator Acid345_0066 66486 - 65299 - | histidine kinase Acid345_0067 68065 - 66467 - | putative circadian clock protein, KaiC TERM 68 67619 - 67603 - G 77 -7.9 -4.29176 | opp_overlap 67604 67606, overlap 67604 ACAGCGAATCGAAAA CCACCCG AAC CGGGTGT AGTCTCTCAACCTCT Acid345_0068 68435 - 68704 + | hypothetical protein Acid345_0069 70118 - 69030 - | beta-lactamase-like TERM 69 70349 - 70363 + G 74 -12.8 -2.90075 | TGGGCTTTCATTTTT CCGGCG ATA CGCCGG TCTACTTCGGGAAAC Acid345_0070 70249 - 71427 + | acyltransferase 3 Acid345_0071 71503 - 72429 + | hypothetical protein TERM 70 72475 - 72443 - T 100 -17.2 -3.53224 | gap 1, opp_overlap 72433 72449, overlap 72430 72449 GAGCTTTGTCGCAAA GAAG-AAGCCCTCCG TTTT CGGAGGGCTTACTTC TGACAAGAATTTGCG TERM 71 72449 - 72468 + T 95 -15 -3.44146 | opp_overlap 72443 72449, overlap 72433 TGTCGCAAAGAAGAA GCCCTCCG TTTT CGGAGGGC TTACTTCTGACAAGA TERM 72 72468 - 72449 - T 100 -15 -4.08557 | opp_overlap 72449 72433, overlap 72443 TGTCGCAAAGAAGAA GCCCTCCG TTTT CGGAGGGC TTACTTCTGACAAGA Acid345_0072 75312 - 72508 - | response regulator receiver protein TERM 73 72653 - 72675 + g 93 -13.5 -3.87815 | opp_overlap 72659 TCAATGGCGGCGCCG CCGAAACCG ACAGC CGGTTTCGG TTTATAGGCGTCGCC TERM 74 73115 - 73086 - G 72 -9.9 -3.64703 | gap 1, opp_overlap 73086 73087 CTTCCGCCATCCAAA CGCGCACCG-CGCC AAT GACGACGGCGGGCG CTTCTTCCACGGCGG TERM 75 73241 - 73255 + g 86 -8.6 -4.65916 | overlap 73231 73230 ACATCCGCCTTCGCC GAAGGA GCT TCCTTC TTTTCTTCGACTGGC TERM 76 74393 - 74421 + g 76 -13.1 -3.05384 | overlap 74388 74418 ATTTCTGGCACGGGC GGCGCGGTTTCCG CGA CCGAAACCGCGGC TTCGGTGGAGACCGG TERM 77 75481 - 75447 - R 70 -9.3 -3.70505 | opp_overlap 75455, overlap 75450 75455 TAAACCAATCCTAAA TGAGAAAACCGGCAC GCAAT ATGCCGGTTTTCACC TGAGATAGATACCGC TERM 78 75478 - 75450 - R 86 -14 -2.94679 | opp_overlap 75455, overlap 75447 75455 ACCAATCCTAAATGA GAAAACCGGCAC GCAAT ATGCCGGTTTTC ACCTGAGATAGATAC TERM 79 75455 - 75473 + r 74 -7.4 -4.14243 | opp_overlap 75450 75447 75455 TCCTAAATGAGAAAA CCGGCA CGCAATA TGCCGG TTTTCACCTGAGATA TERM 80 75473 - 75455 - R 87 -8.1 -4.61566 | opp_overlap 75455, overlap 75450 75447 TCCTAAATGAGAAAA CCGGCAC GCAAT ATGCCGG TTTTCACCTGAGATA Acid345_0073 76992 - 75499 - | DNA uptake lipoprotein-like TERM 81 76455 - 76493 + g 74 -7.3 -4.35524 | gap 1, opp_overlap 76453, overlap 76447 TGCCGATGAGGAACT CGC-GTTGCGCCAGGATC TCTT GTACCTGGAGCAGCCGCG TTTTCGCTTTCGGAA TERM 82 77010 - 77029 + r 71 -10.6 -3.23219 | overlap 77008 CGACCTACCTTTGGT GCAGGGGC TAAA GCCCCCGC TCTTCTGCAACTCTT Acid345_0074 77891 - 77217 - | ribulose-5-phosphate 3-epimerase Acid345_0075 78339 - 77989 - | glyoxalase/bleomycin resistance protein/dioxygenase Acid345_0076 78524 - 78910 + | hypothetical protein TERM 83 78977 - 79000 + F 82 -5.2 -5.0925 | GAGCGCGGGTGGAGG GGCCCCTC AGAGTTTG GAGGAGCC TTTTTCCTTTTGCGC TERM 84 79518 - 79493 - g 100 -11.9 -5.11063 | opp_overlap 79493 AGCAGGCAATAAAAA CGGTCCGAACC TGGA AGTTCGAACCG TCTATGTACCAGGGA Acid345_0077 79132 - 79584 + | TonB-like protein Acid345_0078 80269 - 79589 - | TENA/THI-4 protein TERM 85 80667 - 80655 - g 77 -7.7 -4.33274 | CTGAGATTATCAAAA CGTTC GGG GAACG GTGCCCCACCGTGAA Acid345_0079 80450 - 81193 + | PEGA domain-containing protein Acid345_0080 81260 - 83209 + | tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA TERM 86 83258 - 83271 + F 76 -3.1 -5.00895 | overlap 83259 TACTCTCTCATTCAT TTCCT ATGC AGGAG TTTTTATGTCCTACG Acid345_0081 83277 - 83771 + | DinB TERM 87 83926 - 83908 - T 100 -13.1 -4.44667 | opp_overlap 83908, overlap 83893 83892 GCCGGCAATAATAAA GGCCGGC ATACA GCCGGCC TTCTGCATATCCGAG TERM 88 83908 - 83926 + T 84 -13.1 -3.39327 | opp_overlap 83893 83892 83908 GCCGGCAATAATAAA GGCCGGC ATACA GCCGGCC TTCTGCATATCCGAG Acid345_0082 84247 - 83951 - | histone-like DNA-binding protein Acid345_0083 85074 - 84580 - | 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase Acid345_0084 85148 - 85873 + | response regulator receiver protein lpxC 86748 - 85870 - | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase TERM 89 86851 - 86879 + H 83 -9.5 -4.07568 | overlap 86853 TGGATGTGGTTAATT GGCCACAGAACCG GGG CGGTACTGTGGTA TTTTCACCGCGCGGC TERM 90 86853 - 86877 + H 95 -14.3 -3.63744 | overlap 86851 GATGTGGTTAATTGG CCACAGAACCG GGG CGGTACTGTGG TATTTTCACCGCGCG TERM 91 87366 - 87378 + G 76 -4.7 -4.85782 | overlap 87367 AGGAAGAAGGCGGAT ACGCG CGG CGCGA TTTCTTTTTGGAGAG TERM 92 88446 - 88419 - g 91 -12.6 -4.06055 | AGTTCTCAAAGGAAA CGGCGCAGGCGA TGGT TCGCGAGCGCCG TCAGAGAGGATATTT Acid345_0086 87032 - 88573 + | hypothetical protein Acid345_0087 89073 - 88570 - | hypothetical protein TERM 93 89012 - 89041 + g 77 -7.7 -4.30995 | overlap 89013 89014 ACTATCACGCGTGCT TTCGCTGCCGCGA TCTG TTGCGGCCGCGCG TTGTTTTGTGGCGAC TERM 94 89014 - 89039 + g 71 -12.5 -2.50387 | overlap 89013 89012 TATCACGCGTGCTTT CGCTGCCGCGA TCTG TTGCGGCCGCG CGTTGTTTTGTGGCG Acid345_0088 89898 - 89263 - | ribonuclease H TERM 95 90489 - 90509 + r 100 -9 -5.252 | gap 1, overlap 90491 CCGTTCGCAACTCTG GC-CGCTCC ATTA GGAGCGTGC TTTTTTCTCAAGGTC TERM 96 90491 - 90506 + r 73 -10.4 -3.44801 | overlap 90489 GTTCGCAACTCTGGC CGCTCC ATTA GGAGCG TGCTTTTTTCTCAAG Acid345_0089 90764 - 90498 - | hypothetical protein Acid345_0090 91560 - 90769 - | metallophosphoesterase Acid345_0091 92540 - 91563 - | oligopeptide/dipeptide ABC transporter, ATPase subunit TERM 97 92881 - 92867 - R 87 -8.5 -4.57341 | AATTGGCGCGAAAAA CCGCG ATTGA CGCGG GTTCCCGGAAAGCAT Acid345_0092 94216 - 93788 - | hypothetical protein TERM 98 94278 - 94243 - R 81 -6.8 -4.82901 | overlap 94245 94246 GTCGCGTCAGAAAAA GAGGGCCAAGGTAATG TCGC CTTTACCCTGGCCGTT CGGAGAGCTACGCCG TERM 99 94276 - 94245 - R 76 -9.4 -4.03995 | overlap 94243 94246 CGCGTCAGAAAAAGA GGGCCAAGGTAATG TCGC CTTTACCCTGGCCG TTCGGAGAGCTACGC TERM 100 94275 - 94246 - R 81 -12.9 -3.01915 | overlap 94245 94243 GCGTCAGAAAAAGAG GGCCAAGGTAATG TCGC CTTTACCCTGGCC GTTCGGAGAGCTACG Acid345_0093 94981 - 94286 - | ThiJ/PfpI Acid345_0094 95369 - 96733 + | parallel beta-helix repeat-containing protein Acid345_0095 97254 - 96748 - | hypothetical protein TERM 101 96871 - 96849 - G 70 -12 -2.75521 | overlap 96840 96848 AGCAGAGTCGGAAAT TCCCGCCGAA GTT TCCGACGGGA GCGGTGCACTCACCG Acid345_0096 98319 - 97525 - | hypothetical protein Acid345_0097 98433 - 98954 + | hypothetical protein TERM 102 99014 - 98974 - T 100 -12 -5.06414 | gap 1, overlap 98975 CGCTGCCAACAAAAA GGGGTTCTCCAGGTCTGGA TGGC TCCA-ACCCGAAGAACCCG GTCGAGAAAACGTGC TERM 103 99013 - 98975 - T 100 -15.5 -3.63367 | gap 1, overlap 98974 GCTGCCAACAAAAAG GGGTTCTCCAGGTCTGGA TGGC TCCA-ACCCGAAGAACCC GGTCGAGAAAACGTG Acid345_0098 102703 - 99032 - | protease-like TERM 104 103125 - 103111 - g 75 -9.2 -3.85698 | opp_overlap 103091 103113, overlap 103083 GTCGGCTTCGACAAA GCCGAC GAC GCCGGC GTGTATCTGCTCACG TERM 105 103813 - 103800 - g 78 -9.5 -3.9461 | CGGCCTCAACAACAA CCGCG ACTT CGCGG AGTGCCTGGTGACCT Acid345_0099 103054 - 104016 + | selenophosphate synthase Acid345_0100 104112 - 105413 + | hypothetical protein Acid345_0101 105618 - 108044 + | ABC efflux pump, inner membrane subunit Acid345_0102 108100 - 108603 + | hypothetical protein Acid345_0103 108937 - 108611 - | hypothetical protein TERM 106 108941 - 108916 - G 70 -4.7 -4.44797 | overlap 108917 CCAGCAACACGAAAA CGGAATGCG ACGGTGAG CGCATTCCT GCGGAAGGATCATCA Acid345_0104 109507 - 109055 - | hypothetical protein TERM 107 109371 - 109395 + g 74 -7.8 -4.14945 | GCGAGAACTTCCTTA TCGTCGAGCG GTGCG CGCTTGTCGA TTTCCTTGTTCTTGA TERM 108 111730 - 111712 - g 80 -4.4 -4.9218 | overlap 111713 111714 GATCGAGCAGAAAAA CGGCGCCT TCC AGGGGCAG GCGAACTACATCTTC TERM 109 113599 - 113626 + G 70 -12 -2.71712 | overlap 113598 GCCACCGGACTTCAC GGTCAGCTCCGA TCCT TCGGCGTTGACC ATTTCGGCCGGAGGC Acid345_0105 109913 - 114349 + | protease-like TERM 110 114392 - 114369 - f 79 -13.8 -2.74192 | opp_overlap 114369, overlap 114352 114353 114350 114366 CACGCGGTAATACCA CGCGGCACTC TTCG GGGTGCCGCG TTTTTGTGTCAATTG TERM 111 114369 - 114392 + F 100 -16 -5.00642 | opp_overlap 114352 114353 114350 114369 114366 CACGCGGTAATACCA CGCGGCACTC TTCG GGGTGCCGCG TTTTTGTGTCAATTG Acid345_0106 114467 - 114862 + | putative S-adenosylmethionine decarboxylase proenzyme TERM 112 115006 - 114987 - g 78 -7.8 -4.42386 | CGTTGATTTAGAAAA GGTCGGCA CGGT TTCCGACC TCCCGCCCGATAGTT Acid345_0107 114859 - 115491 + | hypothetical protein Acid345_0108 115491 - 116813 + | hypothetical protein Acid345_0109 116806 - 116988 + | hypothetical protein Acid345_0110 116989 - 117201 + | hypothetical protein Acid345_0111 117202 - 118698 + | spermidine synthase Acid345_0112 118746 - 120209 + | FAD dependent oxidoreductase Acid345_0113 120371 - 121591 + | hypothetical protein TERM 113 121978 - 121963 - g 75 -4 -4.86731 | gap 1, opp_overlap 121941 TGCCGTCAAAGAAAA GCTCGAC GGC GTC-AGC GTGGTTTACATGCAG TERM 114 122666 - 122710 + G 77 -12.2 -3.53224 | gap 1, overlap 122672 GCAATCGTGGGCGCA CTCGAGCATGTGCTGGCTTCG ATCT CGAAGCCCGCGCACGTT-GAG TTTGGACCCGGCCTG TERM 115 122672 - 122705 + G 79 -13.1 -3.27525 | overlap 122666 GTGGGCGCACTCGAG CATGTGCTGGCTTCG ATCT CGAAGCCCGCGCACG TTGAGTTTGGACCCG Acid345_0114 121595 - 122782 + | L-aspartate aminotransferase / phosphoserine aminotransferase TERM 116 122925 - 122912 - f 76 -9.5 -3.78934 | CTGCTTCCACAACAA GGGGC TTTA GCCCC TGCGAAACCCAACGG TERM 117 122964 - 122938 - f 83 -12.9 -3.27525 | opp_overlap 122938 CCCTGCGAAACCCAA CGGCGCGGCGG TTTTG CCGCCGCGCTA CCACTCTCCTTCTCG Acid345_0115 123038 - 124633 + | D-3-phosphoglycerate dehydrogenase TERM 118 124651 - 124682 + T 100 -17.4 -5.27335 | gap 1, overlap 124645 TTTGCAGTCTGGGTG CCCCGTCCTTATCGC GAA GCGATAGGG-CGGGG TTTTTCTTTGCCCAA Acid345_0116 125894 - 124797 - | peptidase M50 TERM 119 125858 - 125829 - G 79 -5.8 -4.78107 | overlap 125832 CATCAGCAGGAAAAA GAACGTC-AGGTGC AGTC GCACCTCGACG-CC GAACAATCGCCCTAT TERM 120 125856 - 125832 - G 88 -10.8 -4.49314 | gap 1, overlap 125829 CAGCAGGAAAAAGAA CGTC-AGGTGC AGTC GCACCTCGACG CCGAACAATCGCCCT TERM 121 125924 - 125904 - H 78 -6.8 -4.57353 | gap 1, overlap 125905 TCGCATGATAGAAAA GGGAGCCGG TTCC CCAGC-CCC TGCTCACATTCTATA Acid345_0117 125987 - 126547 + | hypothetical protein Acid345_0118 127097 - 126540 - | hypothetical protein Acid345_0119 127364 - 128707 + | FolC bifunctional protein Acid345_0120 128769 - 129578 + | 1-acyl-sn-glycerol-3-phosphate acyltransferase Acid345_0121 129575 - 130342 + | peptidase C26 TERM 122 130333 - 130321 - f 79 -3.3 -5.27335 | CGCCGCAAAGAAAAA CGACT TCG AGGCG GTGCGATAAATGTCC Acid345_0122 130343 - 131113 + | short-chain dehydrogenase/reductase SDR Acid345_0123 131140 - 132033 + | hypothetical protein TERM 123 132674 - 132650 - f 72 -4.1 -4.77173 | overlap 132653 132655 CCTTCAGAAAACAAA GAACCGCTTCC CCC GGTAGGGGTAC CAAGGAGTTAACATG TERM 124 133077 - 133025 - g 73 -11.9 -3.03159 | overlap 133038 133060 CCAAGCCGCCGAATA CGACGACGACGAAGCCGACCTCCTC GAA GAAGAAATCGCCGCCGACATCGCCG AAGAAAAGAAACTCG TERM 125 133152 - 133135 - g 79 -6.9 -4.70879 | overlap 133126 133136 133147 GCGAAACCGCAAAAA CCGCGGC GAAC ACCGCGA CTCTCCCCGGGAAAA TERM 126 133183 - 133169 - g 79 -7 -4.56597 | overlap 133171 TCTCCCCGGGAAAAA GCCCGC CGC GCGCGC CGAAACCGCCGCTGC Acid345_0124 132687 - 133280 + | hypothetical protein TERM 127 133303 - 133278 - f 71 -7.5 -3.93556 | overlap 133280 133281 AGCGACGGAATGAAA TAGCCCACCAC GTGA GTGGTGGGAAA ACGGAGACGAAGGAA TERM 128 133301 - 133280 - f 71 -10.1 -3.55604 | overlap 133278 133281 CGACGGAATGAAATA GCCCACCAC GTGA GTGGTGGGA AAACGGAGACGAAGG TERM 129 133300 - 133281 - f 79 -13.6 -2.72881 | overlap 133280 133278 GACGGAATGAAATAG CCCACCAC GTGA GTGGTGGG AAAACGGAGACGAAG TERM 130 133344 - 133334 - f 72 -2.4 -4.94962 | AGAAGCTAAACAAAA GGTC GGA GTCC CATTCATGGGACGGC Acid345_0125 133433 - 134083 + | NADP oxidoreductase, coenzyme F420-dependent TERM 131 134137 - 134172 + F 77 -11.2 -3.60525 | gap 1 TCTCGCGCGTAGCAT TCCTGCGCTCTCGGGCA CAC TGCCGGAGA-CGGAGGA TTGTATGTCGCTCAC Acid345_0126 134177 - 134917 + | MIP family channel protein Acid345_0127 136067 - 134925 - | alanine-glyoxylate aminotransferase Acid345_0128 136734 - 136144 - | TetR family transcriptional regulator Acid345_0130 138657 - 137413 - | hypothetical protein Acid345_0129 136788 - 137471 + | hypothetical protein TERM 132 137920 - 137938 + gT 95 -14.6 -3.21416 | overlap 137937 TGCGAACTGCGTGCT CAGCTCGC ACT GCGAGCTG TTCATGGTGACCATG Acid345_0131 139521 - 138688 - | hypothetical protein TERM 133 140492 - 140512 + G 71 -12.6 -2.57468 | opp_overlap 140503, overlap 140491 GATTTCCAGGCGGGA CTGCGGCA CAACC TGCCGCAG ATTGATGTAATGGAC Acid345_0132 139622 - 142411 + | valyl-tRNA synthetase Acid345_0133 142546 - 143424 + | nicotinate-nucleotide pyrophosphorylase [carboxylating] Acid345_0134 143505 - 143906 + | ferredoxin-like Acid345_0135 143985 - 145076 + | biotin--acetyl-CoA-carboxylase ligase TERM 134 145282 - 145296 + G 75 -8.6 -4.06993 | ACGTAGATTTCAAGG TGATCC ACG GGATCA TTATTTCGTCTGTCG Acid345_0136 145086 - 145910 + | pantothenate kinase Acid345_0137 145993 - 146679 + | hypothetical protein Acid345_0138 146694 - 148019 + | (Uracil-5)-methyltransferase Acid345_0139 148033 - 148326 + | YCII-like protein TERM 135 148413 - 148437 + G 72 -6.4 -4.32857 | gap 1, overlap 148415 TACGGCGTTGGCGTT TGGCTGCGGCA TCCT TGCCGC-GCGA TTTGTCTTTCACCCC TERM 136 148475 - 148527 + G 74 -11.1 -3.54741 | CCTGGCTGATCGCTG CGCTGCTGGTGGTGGCCTGCGCGAT TGG GTTGCGCAAGTCGCCGACGGTCGCG TTTGCGGGGATGATG Acid345_0140 148330 - 150936 + | DNA internalization-related competence protein ComEC/Rec2 TERM 137 151082 - 151103 + T 82 -11.5 -3.91144 | opp_overlap 151072, overlap 151083 AAGAAGTGGCGTTTA CGGCACGGC TGAA GCCGTGCCC TTTCTACGCTGTGGG TERM 138 151083 - 151102 + T 86 -15 -2.94365 | opp_overlap 151072, overlap 151082 AGAAGTGGCGTTTAC GGCACGGC TGAA GCCGTGCC CTTTCTACGCTGTGG Acid345_0141 151388 - 151107 - | hypothetical protein Acid345_0142 152070 - 151432 - | HAD family hydrolase Acid345_0143 153009 - 152107 - | Dyp-type peroxidase TERM 139 152235 - 152246 + g 72 -4.4 -4.56775 | TGACGAGGCCGGCCA TGCT GTCG AGCA TTTTTGCGAGGCGCT TERM 140 153328 - 153369 + G 78 -8.8 -4.19238 | gap 2 CGCACAAGTTCATGT CGTGGGA-CCGCTCG-ATCC TGAC GGATTCGGGCGGCTTCCAGG TTTTCAGCTTGAGCG Acid345_0144 153075 - 154229 + | queuine tRNA-ribosyltransferase TERM 141 154475 - 154493 + G 81 -11 -3.91905 | overlap 154470 CAGCCTGATTTTCAT GGTCGCGA TTT TCGCGATC TTCTATTTCCTTCTG Acid345_0145 154407 - 154730 + | protein translocase subunit yajC Acid345_0146 154746 - 156353 + | protein-export membrane protein SecD Acid345_0147 156415 - 157629 + | protein translocase subunit secF TERM 142 157690 - 157677 - f 78 -2.3 -5.28778 | opp_overlap 157679, overlap 157678 157679 ACGACTTAGAAAAAA GGTTG GGAT CACCC CAATTTTCTGGGAGC TERM 143 157679 - 157693 + F 71 -5.7 -4.36914 | opp_overlap 157677 157679 157678 GACTTAGAAAAAAGG TTGGG ATCAC CCCAA TTTTCTGGGAGCAAA TERM 144 158006 - 157993 - g 78 -6.7 -4.57569 | overlap 158001 GCATGTGGTTAAAAA GATCG AAAC CGATC TGAACAATGGTCAGC Acid345_0148 157760 - 158494 + | TonB-like protein TERM 145 158572 - 158554 - f 72 -12.4 -2.62933 | opp_overlap 158556, overlap 158556 CAAGTTTGCATACCA CAGCCCCA CGG CGGGGCTG TGGTCACTGCCAGTG Acid345_0149 158707 - 159462 + | MotA/TolQ/ExbB proton channel Acid345_0150 159499 - 159948 + | biopolymer transport protein ExbD/TolR Acid345_0151 159967 - 160413 + | biopolymer transport protein ExbD/TolR TERM 146 160452 - 160422 - f 70 -8.9 -3.68704 | gap 1, overlap 160423 ACAATAGGTCAATAA TGGGCGCTCCG-CT CATG AGTCGGGGCGCCCT CCTCCAATTTAGGCC TERM 147 160451 - 160423 - f 72 -12.4 -2.80499 | gap 1, overlap 160422 CAATAGGTCAATAAT GGGCGCTCCG-CT CATG AGTCGGGGCGCCC TCCTCCAATTTAGGC Acid345_0152 160542 - 161363 + | TPR repeat-containing protein TERM 148 161380 - 161412 + F 100 -15 -4.1021 | opp_overlap 161385, overlap 161381 161385 161411 CACTTATCGGTTTAC CCAAAGAGCCTCCT GAACA AGGAGGCTCTTTGC TTTGTGCTTGTCACA TERM 149 161381 - 161411 + F 100 -18.5 -3.05644 | opp_overlap 161385, overlap 161380 161385 ACTTATCGGTTTACC CAAAGAGCCTCCT GAACA AGGAGGCTCTTTG CTTTGTGCTTGTCAC TERM 150 161385 - 161407 + F 100 -13.5 -4.17789 | opp_overlap 161385, overlap 161381 161380 ATCGGTTTACCCAAA GAGCCTCCT GAACA AGGAGGCTC TTTGCTTTGTGCTTG TERM 151 161407 - 161385 - f 89 -13.5 -3.64822 | opp_overlap 161385 161381 161380 ATCGGTTTACCCAAA GAGCCTCCT GAACA AGGAGGCTC TTTGCTTTGTGCTTG Acid345_0153 161506 - 163062 + | pyruvate carboxylase subunit A Acid345_0154 163062 - 163565 + | biotin/lipoyl attachment Acid345_0155 163664 - 163915 + | XRE family transcriptional regulator Acid345_0156 163915 - 165216 + | HipA-like protein TERM 152 165223 - 165242 + T 85 -9.2 -4.42619 | opp_overlap 165223 AGTGCATGAAAAAAA GGCATGGC CGCG GCCACGCC TTTTCTCACATCTTC TERM 153 165242 - 165223 - T 100 -11.4 -5.52986 | opp_overlap 165223 AGTGCATGAAAAAAA GGCATGGC CGCG GCCACGCC TTTTCTCACATCTTC Acid345_0157 166215 - 165262 - | PpiC-type peptidyl-prolyl cis-trans isomerase Acid345_0158 167322 - 166381 - | DSBA oxidoreductase TERM 154 166413 - 166426 + g 74 -2.3 -4.88407 | overlap 166410 TGCCGGTGCTGCCCT GCTCT TGCA AGTGC TTTTTGATTACATCA TERM 155 166663 - 166675 + g 74 -7.7 -4.14633 | overlap 166659 CTGCATTGCCGCAAC GGAAC GAT GTTCC TCTTTTTTACCGGTG TERM 156 166966 - 166984 + g 70 -3.8 -4.71426 | overlap 166968 166970 CACTGGCCGGTTCGC TATGTCGA TCT TCGCCATG TTTTCTTCGTAGGGA Acid345_0159 168280 - 167429 - | hypothetical protein TERM 157 168194 - 168238 + g 100 -13.6 -4.64861 | gap 1 GCCGGAGTAGGCCAC CAGCAGTCGCCCGAGCGAGCG CAGG TGCGC-CTCGAGCGATTGCTG TTTCTTTTCGAGCGA Acid345_0160 170823 - 168325 - | organic solvent tolerance protein OstA-like TERM 158 171771 - 171796 + G 78 -8.9 -4.20696 | overlap 171762 171762 171773 171774 171793 CCTGATCGTGCTGAT CGCCAGCGCAG TGTT CTGCGCTGTGG TTTTGAAGTTGCTGC TERM 159 171774 - 171793 + G 79 -13.6 -3.11289 | overlap 171762 171762 171773 171771 GATCGTGCTGATCGC CAGCGCAG TGTT CTGCGCTG TGGTTTTGAAGTTGC Acid345_0161 171133 - 172119 + | RDD Acid345_0162 172200 - 174467 + | amino acid transporter TERM 160 174493 - 174474 - T 100 -9.2 -5.06414 | opp_overlap 174474, overlap 174475 GTCGGGTAAGAAAAA CGCACGGC CGCA GCCGTGCC TTCGGTTTTAAATTT TERM 161 174492 - 174475 - T 86 -12.7 -3.63367 | opp_overlap 174474, overlap 174474 TCGGGTAAGAAAAAC GCACGGC CGCA GCCGTGC CTTCGGTTTTAAATT Acid345_0163 175820 - 174513 - | sodium/hydrogen exchanger TERM 162 174787 - 174775 - G 71 -10.5 -3.62096 | TCGTACCAGTTGAAA CGCGC CAG GCGCG CGCCGAGTCCGGCGG TERM 163 175481 - 175463 - G 70 -12.4 -2.86271 | overlap 175460 CGGCGATCACAAGCA GGAACGGC ACC GCCGTCCC AACTGACGCCAGCCA Acid345_0164 175993 - 177801 + | hypothetical protein Acid345_0165 177876 - 178064 + | 50S ribosomal protein L28P TERM 164 178121 - 178150 + F 100 -16.5 -3.21354 | gap 1, opp_overlap 178114 CTGCAAATTTCAGGA CGCGCTTC-GCTGG TTT CCGGCGGAAGCGCG TTCGTGCGTCTATAC TERM 165 178959 - 178987 + G 70 -5.1 -4.4891 | overlap 178960 178961 TTGGAAGTGGAGTTC CTGCCGGCGCC AGTGGAA GACGCCGGCGA TTTTCTCGTCCTCGC TERM 166 179109 - 179151 + G 71 -10.6 -3.53012 | gap 1, opp_overlap 179109 CATGTGCACATGGAA GTGCGCCGCGATGGACGCA ACATCA TGCG-CGATCGTGGCGAAC TTTCCGCCGAAGCGC Acid345_0166 178254 - 179798 + | L-glutamine synthetase Acid345_0167 180728 - 179814 - | alpha/beta hydrolase fold TERM 167 180420 - 180430 + g 76 -4.6 -4.81212 | overlap 180408 CACGGCGCGCACATC CGCG GCC TGCG TTTTCTTGTCATAGC TERM 168 181221 - 181236 + G 75 -9 -4.00042 | overlap 181224 TTACGCCGGTGAGCC CGAGAG CGAA CTCTCG TTCTTTAGTGCGAAG TERM 169 181277 - 181253 - g 79 -13.5 -3.04144 | TCTTTAGTGCGAAGA CCCGCGGCCTG CGC CAGGCCGCGAT GAAGCTGTTTGCCGA Acid345_0168 180874 - 181548 + | TetR family transcriptional regulator TERM 170 181542 - 181552 + T 71 -8.2 -3.86015 | TGGGCTGGCGCCGAG CGCG TGA CGCG TTTCTCGAGGCGGTG Acid345_0169 182140 - 181667 - | hypothetical protein Acid345_0170 182592 - 182209 - | hypothetical protein Acid345_0171 183025 - 182597 - | hypothetical protein Acid345_0172 183436 - 183038 - | putative integral membrane protein Acid345_0173 184266 - 183523 - | hypothetical protein Acid345_0174 184653 - 184276 - | endoribonuclease L-PSP TERM 171 184728 - 184682 - R 84 -13.8 -3.09234 | overlap 184685 ACAAACTCCATTTAA CCACAGAGGCACAGAGAATC CGGCCAT GAACCTCTGTGCCTCTGCGT CTCGGTGGTGAATAC TERM 172 184725 - 184685 - R 90 -16.3 -2.7556 | overlap 184682 AACTCCATTTAACCA CAGAGGCACAGAGAATC CGGCCAT GAACCTCTGTGCCTCTG CGTCTCGGTGGTGAA Acid345_0175 186985 - 184763 - | (p)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA Acid345_0176 188129 - 187077 - | radical SAM family Fe-S protein TERM 173 187234 - 187211 - G 80 -4.5 -4.90778 | gap 1, overlap 187213 187215 CCGAGGCAAAGAAAA TGGAGCCGGC GGTAA GCGGGC-CCA GAAGTTTGTGGTTGC TERM 174 187304 - 187333 + g 78 -8.5 -4.13767 | gap 1 GTGAGCAGTCGGGTG CGC-CGCCGAGTTG GCA CGGCTCGACGTGCG TTTTGAAGTCCGCCG Acid345_0177 188252 - 189043 + | 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase TERM 175 189071 - 189090 + T 80 -10.6 -3.88498 | opp_overlap 189071 CAAAGCAAAAGAAAA CGCCCCGC TTCC GCGAGGCG TTTGGTCTATAGCGC TERM 176 189090 - 189071 - T 100 -12.8 -5.22258 | opp_overlap 189071 CAAAGCAAAAGAAAA CGCCCCGC TTCC GCGAGGCG TTTGGTCTATAGCGC Acid345_0178 190375 - 189110 - | hypothetical protein TERM 177 190845 - 190812 - g 71 -8.1 -3.99324 | gap 1, overlap 190815 CCCGACCATGAGAAA GAGCGTCGCACGCGGC TGA GCCGCACAGGACG-TC TGACGATCGGTACCG Acid345_0179 190599 - 191093 + | hypothetical protein Acid345_0180 191168 - 191890 + | cytochrome c biogenesis protein, transmembrane TERM 178 191924 - 191953 + G 75 -4.1 -4.82901 | ACATCGCAATCCTGG GCTTTGCCGTGCT GGTG ATCGCGGCCATGC TTTTTGTCGGCAGCA Acid345_0181 191899 - 192450 + | alkyl hydroperoxide reductase Acid345_0182 192462 - 193007 + | hypothetical protein TERM 179 193039 - 193010 - T 100 -15.7 -4.48987 | CGTTCACAACTAAAA GCAAGAGGCACGC CGCA GCGTGCCCCTGGC CAGACGAAGTACCAA Acid345_0183 193436 - 193056 - | hypothetical protein Acid345_0184 194943 - 193501 - | glutamyl-tRNA synthetase TERM 180 195381 - 195394 + G 78 -8.1 -4.44046 | CCGCTGAAATCTGTG GAGCG GTCG CGCTC TTTGTTTCCGCTCGA TERM 181 196721 - 196732 + G 70 -4.4 -4.55295 | overlap 196711 GTTGCCGCGCTGAAC TTCG ATCG CGAA TTTGTTTATGAGCAG TERM 182 197056 - 197000 - g 88 -11.5 -4.12279 | opp_overlap 197001 197055, overlap 197001 GAAATCGAAATCAAA GCCGAAGCCG-GCACCACAGCGCATGC GAAGG GCAAGCGC-GTCGCGCTCGGCGTCGGT GTGCTCGGTCGCGTT TERM 183 197055 - 197001 - g 85 -15 -3.06283 | opp_overlap 197001, overlap 197000 AAATCGAAATCAAAG CCGAAGCCG-GCACCACAGCGCATGC GAAGG GCAAGCGC-GTCGCGCTCGGCGTCGG TGTGCTCGGTCGCGT TERM 184 197001 - 197055 + G 73 -12.8 -2.80935 | opp_overlap 197001 197000 AAATCGAAATCAAAG CCGAAGCCG-GCACCACAGCGCATGC GAAGG GCAAGCGC-GTCGCGCTCGGCGTCGG TGTGCTCGGTCGCGT Acid345_0185 195158 - 198535 + | diguanylate cyclase with GAF sensor Acid345_0186 198539 - 198898 + | zinc finger, RanBP2-type Acid345_0187 199362 - 198895 - | 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase Acid345_0188 200096 - 199359 - | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase TERM 185 200191 - 200155 - R 100 -8.8 -4.83615 | opp_overlap 200154 TACTGCCGATAAAAA TCCCGCCCGGTT TGCGCATTTTTGG AACCGAGCGGGA CCTTTGTAACGAGTA Acid345_0189 201365 - 200211 - | PilT protein-like TERM 186 201511 - 201489 - R 90 -12.7 -3.84246 | AGTAGTAAGCAATAA CAGCAGCCC TGCTG GGGCTGCCG GATATGAAAGAACAA TERM 187 201854 - 201900 + r 100 -11.7 -4.95302 | gap 1, opp_overlap 201860, overlap 201860 GTGTTTGGGAGAACC GAATAACCGGCGCAGAA-TCTC GGGG GAGAATTAGGCGCCGGTTTTTC TTTTGTTCTATTTCC TERM 188 201860 - 201894 + r 100 -9.3 -5.64321 | gap 1, opp_overlap 201860, overlap 201854 GGGAGAACCGAATAA CCGGCGCAGAA-TCTC GGGG GAGAATTAGGCGCCGG TTTTTCTTTTGTTCT TERM 189 201894 - 201860 - R 70 -9.3 -3.75766 | gap 1, opp_overlap 201854 201860 GGGAGAACCGAATAA CCGGCGCAGAA-TCTC GGGG GAGAATTAGGCGCCGG TTTTTCTTTTGTTCT Acid345_0190 204076 - 201908 - | hypothetical protein Acid345_0191 206316 - 204127 - | hypothetical protein TERM 190 206905 - 206893 - g 72 -4.7 -4.56597 | opp_overlap 206894 206897, overlap 206894 CCGCTCCTTCAAAAA GCCCG CGT CGTGC GCTGATTCACGCCGT Acid345_0192 206478 - 207449 + | zinc-binding alcohol dehydrogenase TERM 191 207754 - 207733 - g 71 -11.5 -3.30159 | overlap 207722 GGAAGCCGGTGAGAA GCCCGGCGT CAAC ACGCCCGGC GGAGAAAACTGGATT TERM 192 207946 - 207930 - g 72 -6.5 -4.2558 | CATGGTTTATCAAAA TGCTTCG GTC CGGAGCA CCGGCTATGACCAGC Acid345_0193 207446 - 208006 + | hypothetical protein Acid345_0194 208445 - 207990 - | Mov34/MPN/PAD-1 Acid345_0195 208638 - 209096 + | hypothetical protein Acid345_0196 210240 - 209176 - | fibronectin, type III TERM 193 209467 - 209434 - G 71 -7.4 -4.13767 | gap 1, overlap 209436 CCCCGGACCCGAAAA CACTGCCTGCAGTTC TTTCG GAACTGCGGGCGG-G AAAACATCATGCGCC TERM 194 209466 - 209436 - G 78 -11.1 -3.6692 | overlap 209434 CCGGACCCGAAAACA CTGCCTGCAGTTC TTTCG GAACTGCGGGCGG GAAAACATCATGCGC TERM 195 210402 - 210423 + G 100 -10.2 -5.22312 | CCTCTTAGAACCCTT GAGCTGCT TCTCAT AGCAGCTC TTTTTTCGTGTGCAT TERM 196 211776 - 211748 - g 75 -4.3 -4.72272 | opp_overlap 211736 CCTCGGCATTAAAAA CGCCGTCTTCCCC GAA GTCGTAGCCGGCG ACAACGACCGCGCCA TERM 197 212178 - 212120 - g 73 -11.6 -3.37493 | CGCGCAACACACCAA GGCCCAGAACGACGGCACCACGAAAG CCAGCAT CATTCGCGAAGCCACCGGCCTGAGCC TTTTCCAGAAATACG Acid345_0197 210378 - 212216 + | hypothetical protein TERM 198 212221 - 212251 + F 100 -14.7 -5.14985 | opp_overlap 212212 212211, overlap 212222 TGAAACCCTGAGCCA GGCAGGCGCAGCT CTCAA GGCTGCGCCTGCA TTTTTCTATGTTTCA TERM 199 212222 - 212250 + F 100 -18.2 -3.67364 | opp_overlap 212211, overlap 212221 GAAACCCTGAGCCAG GCAGGCGCAGCT CTCAA GGCTGCGCCTGC ATTTTTCTATGTTTC Acid345_0198 212259 - 212681 + | hypothetical protein Acid345_0199 212812 - 213228 + | DGPFAETKE domain-containing protein Acid345_0200 213300 - 214415 + | hypothetical protein Acid345_0201 214412 - 214711 + | hypothetical protein Acid345_0202 214827 - 215210 + | hypothetical protein TERM 200 216082 - 216064 - g 79 -7.3 -4.59414 | GTAGAAGAACTAAAA CGCCGCC TCGAC GCCGGCG AAAAACCTTTCATCC Acid345_0203 215221 - 216348 + | UBA/THIF-type NAD/FAD binding protein Acid345_0204 217801 - 216440 - | diguanylate cyclase Acid345_0205 218085 - 218645 + | hypothetical protein Acid345_0206 220552 - 218675 - | peptidoglycan binding domain-containing protein TERM 201 219980 - 219994 + g 77 -7.8 -4.4009 | overlap 219965 CCGTGCTGCCGCAGC CGGCTG GCT CAGCTG TTTTGTCCGATCAGC TERM 202 220191 - 220179 - G 75 -5.5 -4.66833 | CGGTAATCCGAAAAA TCCGG CCA CCGAA GGTCGGAAAGCTGCC Acid345_0207 221549 - 220569 - | hypothetical protein TERM 203 222027 - 222010 - R 100 -12.7 -5.63517 | TCCGGAAAGAAAAAA GCCCGCT GGGG AGCGGGC ACCAGTACTGCGCCA Acid345_0208 222988 - 222050 - | hypothetical protein Acid345_0209 224998 - 223016 - | peptidase M56, BlaR1 Acid345_0210 225384 - 224995 - | CopY family transcriptional regulator Acid345_0211 226195 - 225488 - | short-chain dehydrogenase/reductase SDR TERM 204 226353 - 226385 + r 100 -14.9 -4.64861 | ATATACCACTGCGGC TGCTCCACTCTACGC GAA GCGTAGGGTAGGGCA TTTCTTTTCCAAGCG hslU 227824 - 226406 - | ATP-dependent protease ATP-binding subunit Acid345_0213 228336 - 227914 - | hypothetical protein TERM 205 228284 - 228300 + g 72 -5 -4.56597 | overlap 228267 228266 GTGGCAATCCGGTGT CCCGGC TTGAT GCCGAG TTTTTGCACCAGCGG Acid345_0214 228897 - 228355 - | ATP-dependent protease peptidase subunit Acid345_0215 229083 - 229337 + | hypothetical protein Acid345_0216 230107 - 229556 - | single-stranded nucleic acid binding R3H Acid345_0217 231949 - 230198 - | protein translocase subunit yidC TERM 206 230894 - 230876 - G 75 -10.3 -3.78034 | CAGCCACAGGAACAA CGGCTTC GCAAT GAAGCCG AGATACTTTCCAAAA TERM 207 231780 - 231803 + g 70 -3.7 -4.59414 | overlap 231782 231783 GCAGCCGGTTGTGAA GTCTGCGCC GCAACG GGCGCACTC TTTTGGTTCTTGTCG Acid345_0218 232230 - 231964 - | hypothetical protein Acid345_0219 232691 - 232227 - | ribonuclease P protein component Acid345_0220 232901 - 232746 - | 50S ribosomal protein L34P Acid345_0221 233067 - 233465 + | hypothetical protein Acid345_0222 233584 - 234033 + | hypothetical protein Acid345_0223 235695 - 234034 - | sulphate transporter TERM 208 235665 - 235639 - G 78 -8.7 -4.1552 | gap 1 CAGGTCGGCAACAAA GCGCTGGCGGGA GTAA TCACGC-AGCGC AAGAACGGACTTCGG TERM 209 235806 - 235787 - R 100 -15 -4.61873 | TGGGACAAAGCAAAA CGGCGGGA TCTC TCCCGCCG TCAGTCAATCAGTTT Acid345_0224 238550 - 235827 - | aconitase TERM 210 238585 - 238569 - R 75 -3.5 -4.84017 | overlap 238570 238571 AATTCCTCACAAAAA TGCGCGC CAG GCGCGGT CAATCAGTTGTCAGG Acid345_0225 240200 - 238863 - | deoxyguanosinetriphosphate triphosphohydrolase Acid345_0226 241024 - 240500 - | hypothetical protein TERM 211 240667 - 240690 + g 81 -3.8 -5.16969 | opp_overlap 240667 240666, overlap 240668 TTGGCATCAAAAGAT TCGCAGCAAA TGCG TTCGCTTCGA TTTCTTTTTTGTCTG Acid345_0227 241380 - 241021 - | XRE family transcriptional regulator TERM 212 241537 - 241511 - H 100 -16.6 -3.45839 | opp_overlap 241514, overlap 241505 AGGCCCAAACAGGAA TCAGCCGCGGAT GGA AGCCGCGGCTGA TGTGGGCGACGGACG TERM 213 241514 - 241534 + H 75 -12.5 -2.62184 | opp_overlap 241511 241505 CCCAAACAGGAATCA GCCGCGGAT GGA AGCCGCGGC TGATGTGGGCGACGG TERM 214 241539 - 241570 + H 71 -9.5 -3.55071 | opp_overlap 241505, overlap 241542 GAAGCCGCGGCTGAT GTG-GGCGACGGACG AGTC CGTC-GTCGCCTCGC TTTGCGAAGCTGTAC TERM 215 241542 - 241566 + H 72 -12.2 -2.64274 | gap 1, opp_overlap 241505, overlap 241539 GCCGCGGCTGATGTG GGCGACGGACG AGTC CGTC-GTCGCC TCGCTTTGCGAAGCT Acid345_0228 241631 - 241999 + | hypothetical protein Acid345_0229 241993 - 242841 + | hypothetical protein TERM 216 243226 - 243203 - T 83 -11.8 -3.67597 | opp_overlap 243207, overlap 243207 GGGGGTACTTAACAA TAAACCCCGC TGCT GCAGGGTTTA CCCTCGCACCGCTTC TERM 217 243222 - 243207 - T 83 -8.2 -4.46854 | opp_overlap 243207, overlap 243203 GTACTTAACAATAAA CCCCGC TGCT GCAGGG TTTACCCTCGCACCG Acid345_0230 244504 - 243224 - | manganese transport protein MntH TERM 218 244082 - 244052 - G 72 -9.7 -3.68619 | gap 1, overlap 244072 CTCAATGTAGCGAAA GCCGCGC-TGCTGC AACA GCAGCATGAGCAGC ACGTCGCCAGCGGTG Acid345_0231 244702 - 245979 + | phosphoribosylamine--glycine ligase Acid345_0232 246094 - 247134 + | oxidoreductase Acid345_0233 247167 - 247634 + | hypothetical protein Acid345_0234 247639 - 248199 + | hypothetical protein Acid345_0235 249053 - 248259 - | acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase Acid345_0236 249550 - 249050 - | 3-hydroxyacyl-[acyl-carrier-protein] dehydratase Acid345_0237 249625 - 250791 + | peptidase M20 Acid345_0238 250898 - 251080 + | twin arginine-targeting protein translocase TERM 219 251108 - 251126 + F 100 -11.7 -4.86621 | opp_overlap 251104 TCGCAAAAGATCTGA GGCACGC GACGA GCGTGCC TTTTTGATTGGCGCT Acid345_0239 251166 - 251594 + | hypothetical protein Acid345_0240 252479 - 251898 - | maf protein TERM 220 253425 - 253383 - g 81 -9.1 -4.28762 | gap 1, opp_overlap 253385, overlap 253393 AGAACTCCAGGAAAA TGTGCAGACACTCGCCGCCG AACT CGGCCGCAAG-GTCTGCGTA ATTGCCGAGACCGAT TERM 221 253385 - 253423 + G 70 -11.7 -2.70932 | gap 1, opp_overlap 253383 253393 AACTCCAGGAAAATG TGCAGACACTCGCCGCCG AACT CGGCCGCAAG-GTCTGCG TAATTGCCGAGACCG Acid345_0241 252526 - 254271 + | malto-oligosyltrehalose trehalohydrolase Acid345_0242 254746 - 254261 - | gluconate kinase TERM 222 254469 - 254493 + g 74 -6.3 -4.41348 | overlap 254470 ACGAGGGTTGTGTTC GGTGCCGCGAG TTG CTGGCGGTACG TTTCTTTCAACGCCG TERM 223 255460 - 255425 - g 72 -6 -4.30719 | CTCGGCGATAAGAAA GTCGCCGGCCTCGCTA TAGG CAGCGCAGCCTACAAC TACTGTTTTTACCTG Acid345_0243 254783 - 256015 + | major facilitator transporter TERM 224 256035 - 256054 + F 70 -5 -4.49556 | opp_overlap 256026, overlap 256034 AAAGGACACTAAGGC CTCACGGA GGTA TTTGTGAG TTTGTTTCATGGCCG Acid345_0244 256207 - 258012 + | GTP-binding protein LepA Acid345_0245 259106 - 258339 - | TonB-like protein Acid345_0246 259666 - 259208 - | hypothetical protein TERM 225 259453 - 259433 - G 75 -5.3 -4.63218 | GGCGCCGTAATAAAA CGCCAATCC CAC GCCTTGGCG ATTCGCCGCCAGCGA TERM 226 259850 - 259820 - R 93 -15.6 -3.01712 | opp_overlap 259825, overlap 259805 259825 TTTCCTCTCGCAAGA GAAAAGGACCGC TGTGGTG GCGGTCCTTTTC CATTCCCGAAGTATT TERM 227 259845 - 259825 - R 91 -9.7 -4.66537 | opp_overlap 259825, overlap 259820 TCTCGCAAGAGAAAA GGACCGC TGTGGTG GCGGTCC TTTTCCATTCCCGAA TERM 228 259825 - 259845 + r 91 -11.1 -4.27316 | opp_overlap 259825 259820 TCTCGCAAGAGAAAA GGACCGCTG TGG TGGCGGTCC TTTTCCATTCCCGAA Acid345_0247 260523 - 259873 - | outer membrane chaperone Skp (OmpH) TERM 229 260758 - 260723 - R 93 -10.4 -4.46514 | opp_overlap 260725, overlap 260725 ATTGACGCAAACAAA TGCCCTGCGGAAGCAC CAAA GTACCCCCGCAGGATA ATTAATTTCGTCCCC TERM 230 260756 - 260725 - R 75 -13 -2.55829 | opp_overlap 260725, overlap 260723 TGACGCAAACAAATG CCCTGCGGAAGCAC CAAA GTACCCCCGCAGGA TAATTAATTTCGTCC Acid345_0248 263581 - 260801 - | surface antigen (D15) TERM 231 262759 - 262794 + g 70 -3.8 -4.63218 | overlap 262763 AGCGATCGCCTTCCT CGATCGGCATGGTGAT GTCC ACCACTTTGCCGTCCG TTTTCTTCCACGGCA TERM 232 263010 - 263026 + g 75 -10.8 -3.64371 | overlap 263009 263002 AGGTTCTTCATCGCC GCGCGC AATTC GCGCGC TTTCACGTGTGCGTT Acid345_0249 263908 - 264450 + | hypothetical protein TERM 233 264808 - 264791 - f 76 -12.7 -2.74019 | opp_overlap 264783, overlap 264781 CATAACTTCGAAGTA GCGGGCA ATCC TGCCCGC ACTCAGATTCCCTGA Acid345_0250 264914 - 265204 + | hypothetical protein Acid345_0251 265215 - 265538 + | RNA-binding protein, RNP-1 Acid345_0252 265532 - 265813 + | hypothetical protein Acid345_0253 266247 - 265861 - | hypothetical protein TERM 234 266113 - 266127 + g 73 -11.4 -3.36273 | opp_overlap 266112 266102 GACATCCGAAGGGAT CAGGGG TCG CCCCTG TTCGTCTTCCAAACG Acid345_0254 266754 - 266296 - | hypothetical protein Acid345_0255 268123 - 266927 - | sodium/hydrogen exchanger TERM 235 267401 - 267383 - G 80 -4.4 -5.0133 | overlap 267384 CAGCCCTGCAAAAAA TGCGCCGA TGA TCGCCGCC ATTCCGATCTTCGTC TERM 236 268501 - 268523 + G 76 -12 -3.41051 | overlap 268498 CGTGGTCGTAATCGT CGCCGTAGCG GCC CGTTATGGCG TTATGGTCGGCATCC Acid345_0256 268334 - 268711 + | hypothetical protein Acid345_0257 268766 - 269194 + | thioesterase superfamily protein TERM 237 269716 - 269730 + G 76 -12.8 -3.14132 | opp_overlap 269713 269712 GAGGCCCAGAAGGCC GGCGGC ATG GCCGCC TTCGTGGACGCCGAA Acid345_0258 269449 - 270534 + | recA protein TERM 238 270558 - 270579 + F 100 -15.9 -3.92324 | opp_overlap 270555 TTAGCTAGATGAGCA GGGCGCTGA GAGA TCAGCGCCC TTTGCTATTGCCCAC Acid345_0259 270643 - 271362 + | uridylate kinase TERM 239 271660 - 271646 - f 71 -4.2 -4.59027 | AAGGACCACAGAAAA GATCAC GAC GCGACC CTCAGGGAAGGCGAA Acid345_0260 271907 - 272236 + | hypothetical protein TERM 240 272475 - 272445 - g 73 -11.1 -3.34013 | gap 1, opp_overlap 272441 GACTTTCGCAAGGAA CTGTCG-GCGACCC GCAC GGGCCGCGCGTCAG TGCATATGCTCGACA Acid345_0261 272346 - 272933 + | ribosome recycling factor TERM 241 272957 - 272934 - T 70 -9.6 -3.34043 | opp_overlap 272926, overlap 272955 272956 GTGATGACGGTATAA CCGTTGTCTG AATG CAGAAAACGG CCCACGCGCAATGCG TERM 242 272979 - 272955 - T 75 -7 -4.4715 | opp_overlap 272957 272972, overlap 272934 272956 272957 TCTGAATGCAGAAAA CGGCCCACGC GCAAT GCGTGGGCTT TTCGTTGCACGGACG TERM 243 272978 - 272956 - T 71 -10.5 -3.27808 | opp_overlap 272957 272972, overlap 272934 272955 272957 CTGAATGCAGAAAAC GGCCCACGC GCAAT GCGTGGGCT TTTCGTTGCACGGAC TERM 244 272977 - 272957 - T 81 -14 -2.56203 | opp_overlap 272957 272972, overlap 272956 272955 TGAATGCAGAAAACG GCCCACGC GCAAT GCGTGGGC TTTTCGTTGCACGGA TERM 245 272957 - 272977 + T 100 -14.7 -4.4078 | opp_overlap 272957 272956 272955, overlap 272972 TGAATGCAGAAAACG GCCCACGCG CAA TGCGTGGGC TTTTCGTTGCACGGA Acid345_0262 274865 - 273000 - | hypothetical protein TERM 246 275002 - 275027 + G 75 -9 -4.07885 | CGCCAAAGACTTGCG CCTCGATCGC AGCGTC GCGATCAAGG TTTTACCAGGGCATC Acid345_0263 274892 - 277576 + | serine/threonine protein kinase TERM 247 277622 - 277577 - T 74 -10.9 -3.5456 | opp_overlap 277577, overlap 277579 277580 AAGCTGAACAAGTAA GATCCCCGCCCTGCCGCGAAC GATA GTCTGCGACGGGGCGGGAGGC GCTAGTTCTTCTTGC TERM 248 277620 - 277579 - T 80 -12.1 -3.34089 | opp_overlap 277577, overlap 277577 277580 GCTGAACAAGTAAGA TCCCCGCCCTGCCGCGAAC GATA GTCTGCGACGGGGCGGGAG GCGCTAGTTCTTCTT TERM 249 277619 - 277580 - T 85 -15.6 -2.59971 | opp_overlap 277577, overlap 277579 277577 CTGAACAAGTAAGAT CCCCGCCCTGCCGCGAAC GATA GTCTGCGACGGGGCGGGA GGCGCTAGTTCTTCT Acid345_0264 278145 - 277624 - | MerR family transcriptional regulator Acid345_0265 278243 - 278989 + | 3-oxoacyl-[acyl-carrier-protein] reductase Acid345_0266 279439 - 278990 - | hypothetical protein TERM 250 279863 - 279842 - g 70 -3.7 -4.56597 | gap 1, overlap 279843 279846 TTCCGTCTGCAAAAA GGCATGTCGC AGG GCGACAT-CG AGAAGCGCACAGGTT Acid345_0267 279800 - 280156 + | XRE family transcriptional regulator TERM 251 280201 - 280175 - T 87 -8.6 -4.62069 | opp_overlap 280179, overlap 280179 TTTTGATTTCAAAAA CGAAGCGCGCCA TCG CGGCGCGCTTTT GCATGCTCAAATTTC TERM 252 280179 - 280197 + T 95 -13.1 -4.21194 | opp_overlap 280175 280179 GATTTCAAAAACGAA GCGCGCC ATCGC GGCGCGC TTTTGCATGCTCAAA TERM 253 280197 - 280179 - T 93 -13.8 -3.81926 | opp_overlap 280179, overlap 280175 GATTTCAAAAACGAA GCGCGCCA TCG CGGCGCGC TTTTGCATGCTCAAA Acid345_0268 280877 - 280224 - | two component LuxR family transcriptional regulator TERM 254 281431 - 281416 - g 72 -6 -4.3129 | overlap 281417 TACGGACGAGGAAAA GGCCGC GCAG GCTGCC CTCGGCGGTCGCTCG TERM 255 281569 - 281552 - g 89 -4 -5.63236 | overlap 281554 281563 AGCGAAAAACAAAAA GTCGGC GAACAG GCCGGC GCCCCTTACGAAAGC Acid345_0269 281102 - 281710 + | hypothetical protein Acid345_0270 281732 - 282067 + | hypothetical protein Acid345_0271 282306 - 283292 + | OmpA/MotB family outer membrane protein TERM 256 283316 - 283345 + F 100 -13.6 -5.14563 | gap 1, opp_overlap 283313 CACGTCTCAACACCC CCTCCCGTTCCGG TGCTC CCGG-GCGGGAGG TTTTTTCATGGGCGC Acid345_0272 283532 - 284470 + | hypothetical protein TERM 257 285034 - 285023 - g 88 -5.8 -5.24129 | GGGCTCGATAAAAAA GAGC AGCT GCTC TCCCTGGAACGGGCC Acid345_0273 284564 - 285115 + | methylated-DNA--protein-cysteine methyltransferase Acid345_0274 285225 - 285497 + | hypothetical protein TERM 258 285513 - 285560 + F 86 -14.8 -2.87931 | gap 1, overlap 285516 TTTCTCCGCATTGAT TTCCGCCCTCGCGTTC-GGCGAC ACT GTCGCCAGGAAGCGAGGGCGTCG TGTATACACCATCCC TERM 259 285516 - 285557 + F 100 -23.1 -2.6927 | gap 1, overlap 285513 CTCCGCATTGATTTC CGCCCTCGCGTTC-GGCGAC ACT GTCGCCAGGAAGCGAGGGCG TCGTGTATACACCAT TERM 260 286183 - 286161 - g 79 -6.9 -4.66535 | overlap 286162 AAGTCGCAAAAGAAA TGGAGAGGC TCGAC GCCCCTCCG TCGCCGAAAGAGAAA Acid345_0275 285560 - 286204 + | negative transcriptional regulator Acid345_0276 287592 - 286201 - | phosphoglucosamine mutase TERM 261 286691 - 286716 + g 87 -14.1 -3.35813 | TCCAACCCCATGTTT GACATCGTCGT CGCC ACGACGGTGTC TTCCTTGAGGTGCCC Acid345_0277 288270 - 287596 - | YbbR-like protein Acid345_0278 289145 - 288267 - | hypothetical protein TERM 262 288605 - 288586 - G 72 -9.2 -3.74251 | opp_overlap 288586 288596 GAGAGCGGCAGGAAA CACGCCGC CGCC GCGACGCG ATCTTTTTGGATAAT TERM 263 288810 - 288845 + g 72 -4.8 -4.64676 | opp_overlap 288810 288829 CACATCGTCATACGA CTCG-GAGTTCGCTGC AGAAGA GC-GCGAACTCGCCAG TTTTCTTCCCAGTCG TERM 264 289018 - 289001 - G 71 -11.3 -3.17527 | overlap 288999 GAGCCAGTACGAAGA CGCCCAT CAGC ATGGGCG TAGCGCGGGTGCCGC Acid345_0279 290567 - 289200 - | exodeoxyribonuclease VII large subunit TERM 265 291636 - 291611 - g 74 -6.7 -4.48072 | gap 1, opp_overlap 291611 ATACCGAGTACAAAA CGCG-CGCCCAC GAC GAGGGCTTCGCG TTCCTGCAAAAACGT TERM 266 292548 - 292536 - g 76 -3.4 -4.89477 | TCTCGAAGAAGAAAA GATG GCGGT CATC GTCCAGCAAGTCGTT TERM 267 292573 - 292583 + G 70 -2.4 -4.84017 | GTCGTTGGATCGCAG CACG ACA CGCG TTTTTATCCGGACTT Acid345_0280 290737 - 293724 + | response regulator receiver protein Acid345_0281 294884 - 293829 - | phospho-2-dehydro-3-deoxyheptonate aldolase TERM 268 294792 - 294842 + g 81 -9.1 -4.40358 | overlap 294791 GACGGTCGCTGAAGC GTTCTCCGT-CGTCGGCAGTTCCTC GTC GAGGAAC-GCCGGCGGAAGAACAAC TTTTGTCCACTGGAT Acid345_0282 295933 - 294926 - | glucokinase Acid345_0283 296664 - 295942 - | GntR family transcriptional regulator TERM 269 296787 - 296807 + H 73 -5.4 -4.67943 | overlap 296797 CTTTATACAATGCTC GCCCTC CCTTCGCAA GAGGGC TTTTGTGTCTTCGCC TERM 270 297158 - 297191 + H 100 -10.4 -5.46657 | gap 1, overlap 297157 CAGCTGAACCAGTTC GGCAGGGACGCTT CTGACCTCC AAGCG-CCCTGCC TTTTTTCTTGGGATG TERM 271 297310 - 297275 - g 82 -14 -3.2218 | opp_overlap 297274, overlap 297256 CGCAAGACGTACGAA GGCAAGGTCGAAGCCG TTCG CGGACTCGACCTCACC ATCTATGCCGGACAG TERM 272 297463 - 297445 - g 82 -6 -4.72986 | TACCTGGACGAAAAA TTCGCG CGAACTC CGCGAA CTCATCGGCATCTCG TERM 273 297521 - 297541 + G 72 -5.3 -4.41548 | opp_overlap 297522, overlap 297522 CTCACCGTCCGCGAA ACCGTCGAA CTC TTCGCCGGC TTTTATAAAGTGTCG TERM 274 297667 - 297641 - g 77 -10 -3.85698 | TCCGGTGGCCAGAAA CAGCGCCTCGCC ATT GCCACGGCGCTG GTCGCGAATCCAAAA Acid345_0284 297224 - 298156 + | ABC transporter, ATPase subunit Acid345_0285 298156 - 299226 + | ABC multidrug efflux pump, inner membrane subunit TERM 275 299607 - 299561 - g 78 -6.1 -4.56597 | gap 3, opp_overlap 299604, overlap 299577 TCTCTTCTGCAAAAA CGGCCACTACGAGAATGCTGAA TTTCAG CCCAGCAT-C-CGTA-TGGCCG GTCCGAACCGTCCCG Acid345_0286 299310 - 299882 + | hypothetical protein Acid345_0287 302603 - 299988 - | polysaccharide deacetylase TERM 276 301079 - 301062 - G 75 -5.5 -4.65895 | opp_overlap 301062 GTGCCCAGCGAAAAA GACGAAC ACGC GGTCGTC TTTGTTCACCATGTC TERM 277 302601 - 302585 - G 71 -7.3 -4.24397 | ACAATGCAAGACAAA GAAGTCG TAA CAACTTC ATGAATGCGACACCT Acid345_0288 303319 - 302759 - | hypothetical protein TERM 278 303180 - 303141 - G 83 -9.2 -4.36914 | opp_overlap 303140 303142, overlap 303142 TCGCCTTGCAGAAAA GTTCGCGGGGCGAGATGG CGCA CCATCTCCCAGCGCGAAT ATTCGTCTTCTAACT TERM 279 303179 - 303142 - G 79 -12.7 -3.21934 | opp_overlap 303140 303142, overlap 303141 CGCCTTGCAGAAAAG TTCGCGGGGCGAGATGG CGCA CCATCTCCCAGCGCGAA TATTCGTCTTCTAAC TERM 280 303142 - 303179 + g 79 -12.7 -3.27771 | opp_overlap 303142 303141, overlap 303140 CGCCTTGCAGAAAAG TTCGCGGGGCGAGATGG CGCA CCATCTCCCAGCGCGAA TATTCGTCTTCTAAC Acid345_0289 303445 - 305862 + | ABC efflux pump, inner membrane subunit Acid345_0290 306547 - 305864 - | protein of unknown function DUF861, cupin_3 TERM 281 306082 - 306102 + g 74 -13.9 -2.64735 | overlap 306070 TGCCGGTCTCCGCGC GCCGCGGCG CTA CGGCGCGGC TCATCTGGATGCCGT TERM 282 306436 - 306399 - G 72 -6.1 -4.39571 | overlap 306401 TCCACAAACTTAAAA GAGCGCTTGCCGCGC TTGCACTC GCGCAGCCCGCCCTC CACGCGGAATTCCGG TERM 283 306605 - 306586 - R 74 -7.8 -4.19258 | opp_overlap 306585 ATATCGCATGCAAAA GCCGGG CGCAAAGT CCCGGC CTTGCTCAACGAATG Acid345_0291 308268 - 306628 - | cytochrome c, class I TERM 284 308317 - 308298 - R 80 -10 -3.92577 | overlap 308296 GAATTGGGAAAAACA TGCCGTGC GAGC ACACGGCA ACTTAGGCATTGGAT TERM 285 308580 - 308612 + r 100 -12.8 -5.27938 | GGCCAGTGTTTCTCG GGGGAAGTCTCGCT GGAGA AACGAGACTTCTCC TTTTTATTTACGGCT TERM 286 308663 - 308644 - R 81 -8.5 -4.2349 | TCCCGACAGCGAAAA CGCCGCC CACAGC AGCGGCG ATTCCGGCAGCGTCA Acid345_0292 311331 - 308620 - | hypothetical protein TERM 287 311337 - 311371 + r 78 -13.7 -2.52896 | overlap 311340 311341 CCAGGAGCATTTGGG GAACCCGAACTCAGG GGCTA CTTGAGTTCGGATTC TAACTTGCAGGCTCG TERM 288 311340 - 311368 + r 70 -9.6 -3.41878 | overlap 311337 311341 GGAGCATTTGGGGAA CCCGAACTCAGG GGCTA CTTGAGTTCGGA TTCTAACTTGCAGGC TERM 289 311341 - 311367 + r 75 -13.1 -2.64912 | overlap 311340 311337 GAGCATTTGGGGAAC CCGAACTCAGG GGCTA CTTGAGTTCGG ATTCTAACTTGCAGG Acid345_0293 312193 - 311354 - | hypothetical protein Acid345_0294 312671 - 312174 - | ECF subfamily RNA polymerase sigma-24 factor TERM 290 312346 - 312368 + g 74 -11.3 -3.53224 | GTCACACAGACTCGA TGCAGCGGC GTAAG GCTGCTGCA TTTGCGAAACAAATC Acid345_0295 312948 - 313667 + | hypothetical protein TERM 291 313714 - 313734 + G 100 -16.9 -4.63218 | opp_overlap 313718 GCAGCTTCTCCTTCA GGAACGCCC GTT GGGCGTTCC TTTTGTTCGCAGCAC Acid345_0296 313689 - 315869 + | hypothetical protein TERM 292 315902 - 315874 - f 100 -10.4 -5.63517 | gap 1, overlap 315876 315877 315878 CGTCGAAATAAAAAA TAGCGGTGGGAGG GCGC CCTCCCACCA-TA AGAAAAATTTCGTTC TERM 293 315901 - 315876 - f 93 -11.1 -4.45696 | overlap 315874 315877 315878 TCGAAATAAAAAATA GCGGTGGGAGG GCGC CCTCCCACCAT AAGAAAAATTTCGTT TERM 294 315900 - 315877 - f 95 -14.6 -3.25791 | overlap 315876 315874 315878 CGAAATAAAAAATAG CGGTGGGAGG GCGC CCTCCCACCA TAAGAAAAATTTCGT TERM 295 315899 - 315878 - f 85 -15.9 -2.53848 | overlap 315877 315876 315874 GAAATAAAAAATAGC GGTGGGAGG GCGC CCTCCCACC ATAAGAAAAATTTCG TERM 296 315962 - 315910 - f 91 -7.1 -5.22006 | gap 1, overlap 315911 CCACCATAAGAAAAA TTTCGTTCCCAGTTGGTTCGCG CGGAGTGGTT CGCAAACCG-CCGGGAACGAAT GCAGTTGTTACATCG TERM 297 315961 - 315911 - f 76 -10.6 -3.72119 | gap 1, overlap 315910 CACCATAAGAAAAAT TTCGTTCCCAGTTGGTTCGCG CGGAGTGGTT CGCAAACCG-CCGGGAACGAA TGCAGTTGTTACATC Acid345_0297 316370 - 318811 + | ABC efflux pump, inner membrane subunit Acid345_0298 318924 - 320195 + | hypothetical protein Acid345_0299 321077 - 320199 - | putative oxidoreductase TERM 298 320808 - 320826 + g 70 -3.8 -4.62069 | overlap 320813 GCGACGTCCGCCGAC CTTGGTGA CGA TCGTCAGG TTTTTCGGATACGGG Acid345_0300 321148 - 321792 + | TetR family transcriptional regulator Acid345_0301 322143 - 322697 + | hypothetical protein Acid345_0302 322804 - 324072 + | UDP-glucose/GDP-mannose dehydrogenase TERM 299 324125 - 324149 + F 100 -12.9 -4.5442 | TGTGTTTCCTCCTTC GGCGCGAAC CTAAACC GTTCGCGCC TTTTATAATTCCGAG Acid345_0303 324176 - 324598 + | OsmC-like protein TERM 300 325532 - 325547 + G 79 -6.8 -4.56597 | GGCGGAGTCGGGGTA CTGTCC GTCG GGACGG TTTTTCGAGGCCGCG Acid345_0304 324729 - 325814 + | hypothetical protein Acid345_0305 325811 - 326569 + | nucleotidyl transferase Acid345_0306 326830 - 326582 - | hypothetical protein TERM 301 327194 - 327225 + r 74 -6.6 -4.3586 | opp_overlap 327194 GCACCAGAGATTGAA TGGCCTTTGCAA TCGATAAC TTGCATGGGCCA TTTTGCTGTCCATCA Acid345_0307 330534 - 327364 - | acriflavin resistance protein Acid345_0308 331799 - 330534 - | secretion protein HlyD TERM 302 331780 - 331764 - G 82 -6.5 -4.72272 | overlap 331766 GCCGGCCAGCAAAAA TAGCGAC GTA GTCGCGA ACAGCAACAGGGTCT TERM 303 331778 - 331766 - G 75 -9.1 -3.98256 | overlap 331764 CGGCCAGCAAAAATA GCGAC GTA GTCGC GAACAGCAACAGGGT Acid345_0309 333172 - 331796 - | outer membrane efflux protein Acid345_0310 334630 - 333176 - | periplasmic sensor signal transduction histidine kinase Acid345_0311 335325 - 334627 - | two component transcriptional regulator Acid345_0312 335466 - 336464 + | hypothetical protein Acid345_0313 337449 - 336532 - | phosphoesterase, PA-phosphatase related Acid345_0314 338019 - 337549 - | hypothetical protein TERM 304 338243 - 338224 - R 100 -12.1 -5.18357 | CAACGCATGAAAAAA GCCCCGG TGGGTG CCGGGGC TCGGAGGTTCGATTG Acid345_0315 341638 - 338261 - | hypothetical protein Acid345_0316 342273 - 341980 - | hypothetical protein Acid345_0317 343450 - 342299 - | hypothetical protein Acid345_0318 343924 - 343505 - | hypothetical protein TERM 305 344175 - 344188 + G 75 -3.7 -4.80167 | overlap 344167 344166 TCCTCTCGCGATCGA GCCGC GATC GCTGC TTTTCGTTTTTCCTG Acid345_0319 344060 - 346009 + | ASPIC/UnbV Acid345_0320 347979 - 346156 - | hypothetical protein TERM 306 347895 - 347951 + g 93 -17.3 -3.35597 | gap 1, opp_overlap 347929, overlap 347895 GCGCTTGCGATGGTC CTGCTTGGGCAGCGGACAGCCGGCTC GCATAG GAGCCGGCTG-CCGCAATTCCAGCAG TCTTTAGAAAATCCC Acid345_0321 349119 - 347992 - | aldose 1-epimerase TERM 307 348892 - 348909 + g 72 -9.1 -3.8709 | GAAGCCGAGGATCAC GTCGGCA GTCT TGCCGGC TTTATCGGGCGCTTT Acid345_0322 350744 - 349155 - | ribulokinase Acid345_0323 350978 - 350763 - | hypothetical protein Acid345_0324 352690 - 350987 - | SSS family solute/sodium (Na+) symporter araD 353395 - 352697 - | L-ribulose-5-phosphate 4-epimerase TERM 308 353520 - 353500 - R 100 -14 -5.00616 | TTGGGGCGTAAAAAA GCGCCCCT TGGAG AGGGGCGC AATCGTGCAGTGGTG Acid345_0326 355078 - 353576 - | L-arabinose isomerase Acid345_0327 355360 - 355106 - | hypothetical protein Acid345_0328 355532 - 357187 + | Alpha-L-arabinofuranosidase Acid345_0329 357323 - 358366 + | LacI family transcription regulator Acid345_0330 359153 - 358380 - | hypothetical protein TERM 309 359428 - 359395 - R 86 -11.7 -3.84808 | opp_overlap 359399, overlap 359399 TCTAACCCACAATAA GTAAGGATGGCAGGC CGAA GCCCGCCATCCTTTT GAAGCCCACGGTTAC TERM 310 359424 - 359399 - R 100 -16.9 -3.5861 | opp_overlap 359399, overlap 359395 ACCCACAATAAGTAA GGATGGCAGGC CGAA GCCCGCCATCC TTTTGAAGCCCACGG TERM 311 359399 - 359424 + r 100 -14.7 -4.07568 | opp_overlap 359399 359395 ACCCACAATAAGTAA GGATGGCAGGC CGAA GCCCGCCATCC TTTTGAAGCCCACGG Acid345_0331 359922 - 359440 - | phosphate transporter Acid345_0332 360199 - 363399 + | hypothetical protein TERM 312 363401 - 363426 + F 76 -9.7 -3.90241 | gap 1, opp_overlap 363401 TCACCATCAACTAGA CCCGTGC-GGTG CTA CACTGGCGCGGG TTCTTATGATTACTC TERM 313 363471 - 363507 + G 75 -5.8 -4.56597 | gap 1, opp_overlap 363478 363498, overlap 363474 GCAACTTCCGTCAGC GCAATTACGGCTTCGCT CCTC AGCGAAGCCGTCCC-GC TTTTTGGCGGAACAA TERM 314 363501 - 363478 - g 87 -16.8 -2.73364 | opp_overlap 363474 363471, overlap 363498 CCGTCAGCGCAATTA CGGCTTCGCT CCTC AGCGAAGCCG TCCCGCTTTTTGGCG TERM 315 364099 - 364077 - g 75 -9.8 -3.8709 | AAACTGGTTGAGAAA GTGAACAGCC CAT GGCTGCACAC GCTGCCGGACTTCTG Acid345_0333 363432 - 364376 + | xylose isomerase-like TIM barrel Acid345_0334 365234 - 364377 - | short-chain dehydrogenase/reductase SDR TERM 316 365266 - 365237 - R 83 -12.1 -3.65812 | overlap 365241 CTTTCGCGAACATAA GAAACCCTCCGCC CGAA GGAGGAGGGTATC AGAGGGAAAGCTCAC TERM 317 365262 - 365241 - R 93 -11.5 -4.46073 | overlap 365237 CGCGAACATAAGAAA CCCTCCGCC CGAA GGAGGAGGG TATCAGAGGGAAAGC Acid345_0335 366744 - 365323 - | hypothetical protein Acid345_0336 366834 - 367901 + | teichoic acid biosynthesis related protein TERM 318 367969 - 367915 - T 80 -10.9 -3.79678 | gap 2, opp_overlap 367914 367918 367919 367968, overlap 367919 AATTCGCGACAACAA GAAACTGCCGATACGCGTAGTCAAGGA GGC TCCCTAAG--CGCGCATCGGCAGGTTC GTCGTGTTCCGTCGA TERM 319 367965 - 367919 - T 93 -10.3 -4.51812 | gap 2, opp_overlap 367919 367918 367914, overlap 367915 CGCGACAACAAGAAA CTGCCGATACGCGTAGTCAAGGA GGC TCCCTAAG--CGCGCATCGGCAG GTTCGTCGTGTTCCG TERM 320 367968 - 367987 + T 73 -5 -4.65263 | gap 1, opp_overlap 367915, overlap 367914 CGCGCATCGGCAGGT TCGTCG-TG TTC CGTCGACGA TTTCTTTTGCAGGAT TERM 321 368088 - 368072 - T 83 -9.5 -4.19624 | GACGGCGAAGAGAAA CGCATAA AAA TTATGCG AATCATCGGAAGAAT Acid345_0337 368636 - 368124 - | hypothetical protein Acid345_0338 369318 - 368665 - | hypothetical protein TERM 322 369349 - 369319 - R 100 -17 -4.17762 | GAGGCTGCAAAACAA CTACGCACTCCG GAGCGAA CGGAGTGCGTAG CGAAGGGTCCGTTGG Acid345_0339 370159 - 369398 - | MerR family transcriptional regulator Acid345_0340 371173 - 370214 - | cytochrome oxidase assembly TERM 323 370465 - 370444 - G 74 -7.3 -4.3586 | gap 1 TGAGTGACACGAAAA CCG-CGACGA TGA TCGTCGACAG CAGCGCCAGTGCAGG Acid345_0341 373810 - 371186 - | ABC efflux pump, inner membrane subunit TERM 324 371607 - 371619 + g 76 -3.3 -5.00616 | TGGCCTACCACCTCT TCCTC GGT GTGGA TTTTTTCGACGGGAA TERM 325 373209 - 373184 - G 79 -7.5 -4.59773 | gap 1 GTCCACGCCGAAAAA CTCCGG-CGGCG CCA CGCCGACCACAG TCATCGGGCTCCCAT TERM 326 374226 - 374203 - g 78 -11 -3.77831 | opp_overlap 374210 374219, overlap 374210 CGAGCAAGACCGAAA CGAGAAACCG GCAC CGGGTTCTCG CGTCGCCCATGGCGC Acid345_0342 373884 - 374246 + | hypothetical protein TERM 327 374431 - 374421 - g 74 -6.8 -4.39287 | GCAACGAGACCAAAA CTCC GCC GGAG ATCCTCGCCTACCGG Acid345_0343 374276 - 375310 + | galactose-1-phosphate uridylyltransferase Acid345_0344 375367 - 375996 + | hypothetical protein Acid345_0345 377554 - 376523 - | transposase IS116/IS110/IS902 TERM 328 376851 - 376872 + g 71 -11.5 -3.25823 | opp_overlap 376847 TTGCGGAACGACGAC CCGTTGCCG ATAG CGGCCACGG TTGCTGTCGAAACCA TERM 329 377818 - 377775 - R 78 -11.9 -3.16039 | gap 1, opp_overlap 377776 377777 377781 AAGGAGTTTGACGAA GCCCGATCACCCACTCTC TCTGCGGCG GAGAGTGGGTGATTGG-C TTGATACGTCATTGC TERM 330 377776 - 377818 + r 95 -15 -3.20435 | opp_overlap 377775, overlap 377777 377781 AGGAGTTTGACGAAG CCCGATCACCCACTCTCT CTGCGGC GGAGAGTGGGTGATTGGC TTGATACGTCATTGC TERM 331 377777 - 377817 + r 100 -18.5 -2.5194 | opp_overlap 377775, overlap 377776 377781 GGAGTTTGACGAAGC CCGATCACCCACTCTCT CTGCGGC GGAGAGTGGGTGATTGG CTTGATACGTCATTG TERM 332 377781 - 377813 + r 95 -14.3 -3.21199 | opp_overlap 377775, overlap 377777 377776 TTTGACGAAGCCCGA TCACCCACTCTCT CTGCGGC GGAGAGTGGGTGA TTGGCTTGATACGTC Acid345_0346 380265 - 377827 - | cell surface glycoprotein Acid345_0347 381720 - 380518 - | diguanylate phosphodiesterase Acid345_0348 382770 - 381763 - | Alpha/beta hydrolase Acid345_0349 383634 - 382840 - | hypothetical protein TERM 333 383826 - 383797 - R 100 -10.7 -5.1417 | opp_overlap 383819, overlap 383798 GCAGAAAAGTAAAAA GCGTGCCGTCCAA AACT CTGAACGGCACGT TGGCGTGTTGAAAAA TERM 334 383825 - 383798 - R 95 -14.2 -3.66876 | opp_overlap 383819, overlap 383797 CAGAAAAGTAAAAAG CGTGCCGTCCAA AACT CTGAACGGCACG TTGGCGTGTTGAAAA Acid345_0350 384822 - 383899 - | hypothetical protein TERM 335 385265 - 385250 - g 82 -9 -4.4648 | ACGCCTACCAGAAAA TGCAGG GCAC CCTGCA ATCCGGAATCGCCGG Acid345_0351 384937 - 385482 + | PHA accumulation regulator DNA-binding-like TERM 336 385478 - 385468 - f 71 -4.6 -4.60258 | TCACCAAAGAAGAAA CGGC CAA ACCG CTGAGTTGAATCTGT TERM 337 387470 - 387485 + G 77 -10.4 -3.89346 | opp_overlap 387469 387466 TGGCCATGCAATTAG CACGGG TTCG CCCGTG TTTATCGACTCGAAC Acid345_0352 385617 - 388730 + | hypothetical protein Acid345_0353 389186 - 390115 + | beta-lactamase-like Acid345_0354 390250 - 392319 + | hypothetical protein Acid345_0355 393141 - 392335 - | hypothetical protein TERM 338 393161 - 393175 + r 71 -5.8 -4.30576 | opp_overlap 393161 393160 GCCTCGGTATGAAAT TGAAAA CGA TTTTCA TTTTCATCCTGAAAC TERM 339 393319 - 393292 - R 76 -12.8 -2.77222 | opp_overlap 393297, overlap 393297 ATTAGGAGTCCAAAC GAAAACCCCGTC CGTA GACGGGGTTTTG CCTGCCCTGGTCCGT TERM 340 393314 - 393297 - R 100 -12.7 -4.55798 | opp_overlap 393297, overlap 393292 GAGTCCAAACGAAAA CCCCGTC CGTA GACGGGG TTTTGCCTGCCCTGG TERM 341 393297 - 393314 + r 95 -12.7 -4.1899 | opp_overlap 393297 393292 GAGTCCAAACGAAAA CCCCGTC CGTA GACGGGG TTTTGCCTGCCCTGG Acid345_0356 395029 - 393335 - | alpha amylase, catalytic region TERM 342 393763 - 393775 + g 86 -4.7 -5.27335 | overlap 393764 GCATCGGTGTGCGCT CGCCG TCA CGGCC TTTTTCTTTGGGCCA TERM 343 394355 - 394381 + g 77 -10.1 -3.91897 | gap 1 GAAGAGCGTGTCCAC GGCGTC-GAGGC GGAA GCCGCTGACGCC TTTGTCCATCCAGAA Acid345_0357 396694 - 395072 - | diacylglycerol O-acyltransferase TERM 344 397350 - 397338 - g 76 -4.7 -4.72272 | GGCCGCGATTAAAAA GTCGG AGA CCGCC GCGAGTAAGAAGTAG Acid345_0358 396898 - 397365 + | hypothetical protein Acid345_0359 397510 - 399198 + | unusual protein kinase TERM 345 399383 - 399401 + G 72 -8.8 -3.85698 | GGCTTCTCGTGGATG GCTTCGCC GTC GGCGAACC TTTATCAACGCGGCG Acid345_0360 399248 - 399961 + | hypothetical protein TERM 346 400003 - 399984 - T 86 -12.8 -3.73647 | opp_overlap 399984 TTGATGCACGAAGAA GGCGCGCC CGCG AGCGCGCC TTTTGTTTTGCGCCG TERM 347 399984 - 400003 + T 100 -12.1 -5.07652 | opp_overlap 399984 TTGATGCACGAAGAA GGCGCGC CCGCGA GCGCGCC TTTTGTTTTGCGCCG Acid345_0361 401692 - 400022 - | glucose-methanol-choline oxidoreductase TERM 348 401483 - 401471 - G 70 -4.1 -4.66609 | GACGCGACTGAAAAA CCTCA TGC TGAAG AAGCCGCGCAGCCCG Acid345_0362 401800 - 402504 + | Crp/FNR family transcriptional regulator Acid345_0363 402521 - 402934 + | hypothetical protein TERM 349 402972 - 402949 - T 79 -7.3 -4.52589 | overlap 402950 GCTCTTCAGACAAAA CGCCCGCCC CTTCCC AGGCGGGCT GAGTGTTCCAAGTCA TERM 350 402971 - 402950 - T 73 -10.8 -3.31232 | overlap 402949 CTCTTCAGACAAAAC GCCCGCCC CTTCCC AGGCGGGC TGAGTGTTCCAAGTC Acid345_0364 405282 - 402997 - | putative nitric-oxide reductase Acid345_0365 406081 - 405353 - | protein of unknown function DUF542, ScdA-like TERM 351 406272 - 406289 + H 70 -5.5 -4.42386 | overlap 406273 AGGCGTCATTTTTCG CTGTCCG GTTC CGGACAC TTTTCTCCGTCACGG TERM 352 406481 - 406449 - g 100 -12 -4.50358 | gap 1, overlap 406441 ATTCAAACAGCAAAA GCGCCGCCGCCAGAT CATC ATC-GGCAGCGTCGC CGTAGTCATACTTGT Acid345_0366 406360 - 407673 + | secretion protein HlyD Acid345_0367 407706 - 408428 + | ABC transporter, ATPase subunit TERM 353 409314 - 409336 + G 72 -5.5 -4.43477 | gap 1, opp_overlap 409293, overlap 409316 409317 GCCCCTGGCGTTCCT GC-TCGGCGC CGTC GCGCTGGTGC TTTTGATTGCCTGCG TERM 354 409491 - 409516 + G 78 -11.1 -3.67141 | overlap 409468 GGCATTGTCAGGCGC GCTTCTCGGCG TGGT CGTCGCGAAGC TTTCGATCCCCTTGT TERM 355 409957 - 409977 + G 71 -12.5 -2.59881 | opp_overlap 409955, overlap 409956 409976 CAGTTGAAGCAGATC CCCGGCGTG CAG CACGCCGCG ATTGTGGACTCGATC Acid345_0368 408463 - 410913 + | ABC efflux pump, inner membrane subunit Acid345_0369 410924 - 413491 + | ABC efflux pump, inner membrane subunit Acid345_0370 413496 - 415913 + | ABC efflux pump, inner membrane subunit Acid345_0371 415921 - 418338 + | ABC efflux pump, inner membrane subunit Acid345_0372 418354 - 419064 + | ABC transporter, ATPase subunit TERM 356 420719 - 420698 - g 75 -3.7 -4.7629 | gap 1 GGAGCAATTGAAAAA GCAGA-TCCG CAT CGAAGTCCGC AACGCCCAGTATGCC Acid345_0373 419061 - 421049 + | outer membrane efflux protein TERM 357 421115 - 421089 - g 95 -13.6 -4.0911 | opp_overlap 421088 421087, overlap 421079 421090 CAAAACTAATAACAA CGCCCGCGCGCT CCG AGCGCGCGGCCC GCATTTTGGCGGCGG TERM 358 421114 - 421090 - g 89 -17.1 -3.03839 | opp_overlap 421088 421087, overlap 421089 421079 AAAACTAATAACAAC GCCCGCGCGCT CCG AGCGCGCGGCC CGCATTTTGGCGGCG Acid345_0374 421046 - 422461 + | two component, sigma54 specific, Fis family transcriptional regulator TERM 359 422742 - 422713 - g 74 -7.7 -4.14739 | opp_overlap 422738, overlap 422714 CGATTGACGCCAAAA TCGCGCTGCTCGC CGGC GAGAGCATCGCGT GGCTCCTGCTCGTTC Acid345_0375 422451 - 423935 + | periplasmic sensor signal transduction histidine kinase TERM 360 426460 - 426421 - g 75 -3.8 -4.83246 | gap 4 CCATAAACAAAGAAA CGCTGGAAGTCGCATTC-CC GACA GGCGAA-G-G-CTTCCAGCG TCAAATCGTCACTCT Acid345_0376 423981 - 426485 + | glycogen debranching protein Acid345_0377 427853 - 426489 - | succinate-semialdehyde dehydrogenase (NAD(P)+) Acid345_0378 427971 - 428171 + | hypothetical protein TERM 361 428241 - 428259 + F 80 -10.3 -3.85698 | ACTTCTTCGTTGCCC GCTGGGT GCTCG ACCCAGC TTTATGCGGCCCGAA TERM 362 428758 - 428748 - g 77 -8.2 -4.26076 | opp_overlap 428747, overlap 428749 TCATGGCGATCAAAA CGCG CAA CGCG GTCATCTTCAGCCCG TERM 363 429130 - 429111 - g 71 -7.2 -4.15044 | gap 1 GCGCCTCTGAACAAA CT-GTCGTC ATT GACGACGAG ATCTACGACACTGTA Acid345_0379 428324 - 430969 + | bifunctional acetaldehyde-CoA/alcohol dehydrogenase Acid345_0380 431821 - 430994 - | DNA-(apurinic or apyrimidinic site) lyase / endonuclease VIII TERM 364 432166 - 432182 + r 84 -13.7 -3.07994 | opp_overlap 432160 GCGCAAAGAGGCGCG TGCCGGG GAC CCCGGCA TTGGGTCAGATTAGC Acid345_0381 433667 - 432546 - | hypothetical protein TERM 365 433458 - 433484 + g 78 -8 -4.55759 | overlap 433466 GGAGCGATAATCCTT CTTCGGGTCAAG ATA TTTCGCCCGAAG TTTCTTGTTGGTTTT Acid345_0382 434306 - 433674 - | hypothetical protein Acid345_0383 434311 - 435462 + | hypothetical protein Acid345_0384 440076 - 435481 - | DEAD/DEAH box helicase-like TERM 366 436527 - 436510 - G 79 -12.7 -3.30124 | CGCCAGCTCCGATAA CTGCGGC AATG GCCGCAG TTCCGCGGGAGCCAG TERM 367 437239 - 437202 - G 80 -14.2 -2.70932 | gap 1, overlap 437170 437223 CCGTCGCGCGAACGA CGCGGCGCTGG-CGC TCCAAATCC GCGACCAGCGCCGCA ACATCCACGCCGTCT TERM 368 437328 - 437354 + g 80 -10.1 -4.05714 | gap 1 GGAGGGCGTCGGCGG TGCGCG-CGCCG AATT CGGCTTCGCGCA TTTGTAATTGCGCCT TERM 369 439792 - 439815 + g 75 -10.2 -3.72576 | GGGGGCGCGGAGATT GCGTTCGACG TCGA CGGCGAGCGC TTTGATCGGCGAGAC TERM 370 440154 - 440137 - R 70 -6.9 -4.11216 | TTCGTAGCGGGAAAA GGCGCCA CTGC TCGCGCC GTCCGAGAAGTGGGT Acid345_0385 443270 - 440346 - | integrin like protein Acid345_0386 443563 - 444057 + | hypothetical protein Acid345_0387 446481 - 444061 - | Alpha-glucosidase TERM 371 446802 - 446829 + G 71 -10.6 -3.55622 | gap 1, opp_overlap 446774 446771 AAGTTCGAGGGCGTG TGCGATGGCGTGG GCT CGACGCC-TCGCA TTTCAACACCTTGAG Acid345_0388 446563 - 446904 + | hypothetical protein Acid345_0389 447890 - 446925 - | dihydroorotate oxidase B, catalytic subunit Acid345_0390 449555 - 447960 - | type I phosphodiesterase/nucleotide pyrophosphatase TERM 372 448760 - 448772 + g 80 -4.7 -4.90869 | overlap 448769 GCAGATCGGTGGTTG CGCGG GTG CCGAG TTTTTCGTTGGTGAT TERM 373 449076 - 449090 + g 75 -10 -3.73775 | GTGGCCGGTGGGGAG GATCGC GGC GCGATC TTTCATCGAGATGCC TERM 374 449745 - 449730 - g 78 -6 -4.63218 | overlap 449732 CCTGGTGGAAGAAAA GCTGCG GCAA CGCGGC ATGAATCCTGATGAA Acid345_0391 449674 - 450972 + | seryl-tRNA synthetase Acid345_0392 451014 - 451379 + | hypothetical protein Acid345_0393 451391 - 452083 + | hypothetical protein TERM 375 452086 - 452099 + F 77 -3.7 -5.02074 | overlap 452087 ACCGAACGGGTAGCA GGGGC TAAA GCCCG TTTTTTGAGCGGTGC Acid345_0394 452259 - 452609 + | hypothetical protein TERM 376 452674 - 452642 - T 86 -9.7 -4.31835 | opp_overlap 452648, overlap 452645 452648 AAGGTTGAGAACAAA GAAGAAGGGGCGGGA TTA CCCCGCCCCTTTAGC TTGCCCTGCTGGGTC TERM 377 452671 - 452645 - T 100 -14.4 -4.27512 | opp_overlap 452648, overlap 452642 452648 GTTGAGAACAAAGAA GAAGGGGCGGGA TTA CCCCGCCCCTTT AGCTTGCCCTGCTGG TERM 378 452648 - 452668 + T 95 -15.4 -3.76125 | opp_overlap 452645 452642 452648 GAGAACAAAGAAGAA GGGGCGGG ATTAC CCCGCCCC TTTAGCTTGCCCTGC TERM 379 452668 - 452648 - T 100 -16.1 -4.24183 | opp_overlap 452648, overlap 452645 452642 GAGAACAAAGAAGAA GGGGCGGGA TTA CCCCGCCCC TTTAGCTTGCCCTGC Acid345_0395 456462 - 452689 - | hypothetical protein TERM 380 453970 - 453937 - G 71 -10.3 -3.54638 | opp_overlap 453931 ATAATTCTTCGCAAA TTCGCGGGTGATGGA GAAA TCCACCACGTGCGAA TACGGCGTTTTGAGG Acid345_0396 458095 - 456626 - | hypothetical protein TERM 381 458182 - 458198 + H 70 -2.9 -4.7373 | opp_overlap 458173 TGGAAACACGCGGGG CGGACGT TTG ACGTGTG TTTTTGCTGACCTCG TERM 382 458752 - 458731 - g 75 -5.8 -4.62471 | CTGAAGGCGGAAAAA GCGGAGAC GGAAGT GTTTCCGC TGGTGAACAACTTCG Acid345_0397 458230 - 461694 + | polysaccharide deacetylase Acid345_0398 461785 - 462168 + | response regulator receiver protein Acid345_0399 462226 - 462564 + | response regulator receiver protein TERM 383 462588 - 462603 + F 100 -11.8 -5.45802 | overlap 462576 GGTCGGCCTTGCCCC GGCGGC TGAG GCCGCC TTTTTCTTTTGGGGG TERM 384 463992 - 463974 - g 75 -3.7 -4.79223 | overlap 463976 TGACACGACGAAAAA CCCCGGA ATGGG CCCGGTG ATCAACGAAAGCTCG Acid345_0400 462874 - 464469 + | 1-pyrroline-5-carboxylate dehydrogenase TERM 385 464489 - 464515 + F 83 -7.3 -4.63527 | gap 1, overlap 464493 GAGTGGGTGGTAGTA GTGA-GGGAGGC TGCG GCCTCCCTTTGC TTTTTCCAGTGCTGG TERM 386 464493 - 464510 + F 100 -12.7 -4.32649 | overlap 464489 GGGTGGTAGTAGTGA GGGAGGC TGCG GCCTCCC TTTGCTTTTTCCAGT Acid345_0401 464631 - 464996 + | response regulator receiver protein Acid345_0402 465362 - 465021 - | Ion transport, K+ channel Acid345_0403 465563 - 466999 + | hypothetical protein TERM 387 467163 - 467129 - g 84 -7 -4.80882 | overlap 467130 467139 ATGGCACAGGAAAAA CCGGCAGCAACCGCAA CCC CTGCGGCTGCGGACAA GACAACCGCGGCGAA Acid345_0404 467039 - 468055 + | hypothetical protein TERM 388 468074 - 468095 + T 100 -9.3 -5.64274 | opp_overlap 468075 468076, overlap 468075 468076 ATCGAGGCAAGAAAA ATGGCCCGC TTCG GCGGGCCGA TTTTTTTGTAAGTCC TERM 389 468075 - 468094 + T 93 -12.8 -3.9748 | opp_overlap 468075 468076, overlap 468074 468076 TCGAGGCAAGAAAAA TGGCCCGC TTCG GCGGGCCG ATTTTTTTGTAAGTC TERM 390 468094 - 468075 - T 100 -10.6 -5.10461 | opp_overlap 468074 468075 468076, overlap 468076 TCGAGGCAAGAAAAA TGGCCCGC TTCG GCGGGCCG ATTTTTTTGTAAGTC TERM 391 468093 - 468076 - T 95 -14.1 -3.65554 | opp_overlap 468075 468074 468076, overlap 468075 CGAGGCAAGAAAAAT GGCCCGC TTCG GCGGGCC GATTTTTTTGTAAGT TERM 392 468076 - 468093 + T 86 -14.1 -2.97403 | opp_overlap 468076 468075, overlap 468075 468074 CGAGGCAAGAAAAAT GGCCCGC TTCG GCGGGCC GATTTTTTTGTAAGT Acid345_0405 468769 - 468113 - | two component LuxR family transcriptional regulator TERM 393 468243 - 468279 + g 71 -7.1 -4.15849 | TTGCGCAGGTAGTTC TTGATGACCTGCTCGGT GGT GCCGAGCTGGACGGCGA TTTCCTTGTTCTTGT Acid345_0406 469093 - 468782 - | hypothetical protein TERM 394 469241 - 469188 - R 75 -11.1 -3.36515 | gap 1, opp_overlap 469172, overlap 469186 CGTGATTCTGAAAGA TTCGGGCTGTTGCAGAGCCTGACACG TGC CGTGTAAGGCTCTGCA-CAATGGGAA AGTGAGTGGAGTGCC Acid345_0407 469916 - 469491 - | putative integral membrane protein Acid345_0408 470475 - 469909 - | hypothetical protein Acid345_0409 471433 - 470570 - | Alpha/beta hydrolase TERM 395 471235 - 471196 - G 74 -13.6 -2.69964 | opp_overlap 471191, overlap 471193 CGTGGAAGTAGATGA GCGTGGGGGCTGCC GGATCTTGCGAG GGCAGCCACCACGC GTAGAGTTTGGAGTT Acid345_0410 473568 - 471430 - | peptidase S9, prolyl oligopeptidase Acid345_0411 473659 - 474057 + | alkylhydroperoxidase AhpD Acid345_0412 474029 - 474490 + | hypothetical protein Acid345_0413 475665 - 474487 - | HI0933-like protein Acid345_0414 475793 - 476035 + | putative acyl carrier protein Acid345_0415 476046 - 477974 + | HAD family phosphatase Acid345_0416 478185 - 480206 + | hypothetical protein TERM 396 480479 - 480458 - T 95 -11.5 -4.55798 | overlap 480459 TAGCCTAAATGAAAA GGGGACCCC GAAT GGGGTCCCT AAGTACTACAGGCCA TERM 397 480478 - 480459 - T 95 -15 -3.32756 | overlap 480458 AGCCTAAATGAAAAG GGGACCCC GAAT GGGGTCCC TAAGTACTACAGGCC Acid345_0417 484006 - 480503 - | TonB-dependent receptor TERM 398 481851 - 481863 + g 82 -10.5 -4.13767 | CTGATGCCGTAGCCG CCGCG GAT CGCGG TTTTCCCGTCGCCGA TERM 399 484049 - 484002 - G 78 -11.4 -3.65224 | gap 1 ACTCGACTGCAAGAA TTCATTGCTTCCTCCAGCCCGCA CAA TGCGGGCTTGAAGAAG-AGTGCA GGGCGATGGCCGAAA Acid345_0418 486673 - 484250 - | ABC efflux pump, inner membrane subunit Acid345_0419 487964 - 486780 - | periplasmic sensor signal transduction histidine kinase Acid345_0420 488917 - 487964 - | LytR/AlgR family transcriptional regulator TERM 400 488890 - 488904 + g 76 -7 -4.4767 | overlap 488891 GTTGTGAAGCGGATG CCGCGC GGA GCGCGA TTTTCTGCTGCATCG Acid345_0421 489050 - 489850 + | LytR/AlgR family transcriptional regulator Acid345_0422 490581 - 489859 - | GntR family transcriptional regulator Acid345_0423 490961 - 494449 + | hypothetical protein TERM 401 494475 - 494502 + F 100 -13.5 -5.24129 | overlap 494476 ACCCCGATGTATTAT TGGGCAGGATC ATCCTC GATCCTGCCCG TTTTTTGTGGGGACC TERM 402 494476 - 494501 + F 95 -14.8 -3.73995 | overlap 494475 CCCCGATGTATTATT GGGCAGGATC ATCCTC GATCCTGCCC GTTTTTTGTGGGGAC Acid345_0424 494523 - 495464 + | TPR repeat-containing protein TERM 403 495969 - 495944 - g 72 -8.9 -3.84406 | CCTCTACCACAATAA TGGCGACGGCA CATT TGCCGACGTCA CGGAGAAAGCTGGCG TERM 404 496115 - 496091 - g 86 -5 -5.22289 | gap 1 CAGCAAAGATAAAAA CCTGCCCTGCG AAGC CG-AAGGCAAG CCGGGTTATTGCGTG TERM 405 496520 - 496506 - g 70 -4.2 -4.60292 | overlap 496508 TACAAGAACAACAAA GACGAA ACG TTCGAC GATGCAGCAGAGAAG TERM 406 497065 - 497053 - g 85 -3.4 -5.47218 | GTGCACGCAAAAAAA TCGA TTGGG TCGA AGTCCGCTGGCCCGC Acid345_0425 495477 - 497186 + | hypothetical protein Acid345_0426 499040 - 497199 - | glycoside hydrolase family protein TERM 407 497638 - 497656 + g 72 -5.9 -4.46212 | TGTGGGAAGAAGAAG CTGGTGC GACGG GCGCCGG TTTTGTCCTGAACAA Acid345_0427 501198 - 499063 - | cellulase precursor TERM 408 501279 - 501312 + r 71 -8.1 -3.86897 | gap 1 TCAGAAAATGAACTT CGCGC-CGACCTGC ATGATTC GAGGGTCGCGCGCG TTTGTAACCAGTCCG Acid345_0428 504854 - 501264 - | hypothetical protein TERM 409 502079 - 502111 + g 88 -13.3 -3.64703 | opp_overlap 502091 TGGTGCCGATCGATT CGCCGCCAACCACCG TCA CCGTGAATGGCGGCG TTTCGCTAAACGGAC TERM 410 505041 - 505029 - g 79 -5.5 -4.72272 | opp_overlap 505039 CGGTGGGACTAAAAA TGCGC TTG ACGCA CTCATTCGTGCTGTT TERM 411 505680 - 505665 - g 71 -6.8 -4.19238 | CTGCGAATCCGAAAA CCGCCT ACGA AGACGG CTACCGATTGCGGCT Acid345_0429 505028 - 506380 + | hypothetical protein Acid345_0430 506382 - 508517 + | galactose-binding superfamily protein Acid345_0431 508642 - 510033 + | hypothetical protein Acid345_0432 511593 - 510373 - | hypothetical protein Acid345_0433 512489 - 511590 - | hypothetical protein TERM 412 512581 - 512609 + H 72 -2.6 -4.86731 | gap 2 GCGTTCGAAAATGGC GAC-TAGATG-ACG ACG TGTTCATCTAAGTC TTTTGTTTGCACACA TERM 413 513889 - 513908 + G 78 -6.4 -4.63928 | opp_overlap 513889, overlap 513880 513876 CGGCAAGGGCAATCA CGGCTTCA GCCG TGAAGCGG TTTTTGCCCTGCTCT Acid345_0434 512966 - 514345 + | hypothetical protein Acid345_0435 514358 - 515302 + | hypothetical protein Acid345_0436 515331 - 516044 + | hypothetical protein TERM 414 516051 - 516082 + F 73 -9.4 -3.78419 | gap 1, opp_overlap 516050 516048 516047, overlap 516054 GCGTACTAAAACCAG TCAGGGCCTGTAGCG GGA CGCTAC-GGCCCTCC TTATCTATTTACTAC TERM 415 516054 - 516079 + F 87 -15.5 -2.96882 | gap 1, opp_overlap 516050 516048 516047, overlap 516051 TACTAAAACCAGTCA GGGCCTGTAGCG GGA CGCTAC-GGCCC TCCTTATCTATTTAC TERM 416 516288 - 516306 + G 76 -3.1 -4.93696 | gap 1, overlap 516284 516288 TATTGCCTTCCTTGC CGCGCAGT TCGT GCT-CGCG TTTTTCGTCTTTCGA Acid345_0437 516124 - 516927 + | cytochrome c oxidase, subunit II Acid345_0438 516991 - 518778 + | cytochrome-c oxidase Acid345_0439 518789 - 519478 + | cytochrome c oxidase subunit III Acid345_0440 519504 - 520130 + | cytochrome c oxidase subunit III Acid345_0441 520143 - 520451 + | hypothetical protein Acid345_0442 520459 - 520746 + | hypothetical protein Acid345_0443 521468 - 520761 - | hypothetical protein Acid345_0444 521765 - 522871 + | LacI family transcription regulator TERM 417 523096 - 523107 + G 81 -3.6 -5.09259 | GTTTTGCGATCCTGT GCGC GCTA GTGC TTTTCTTTTCAGCTC TERM 418 523357 - 523336 - g 72 -6.5 -4.36914 | opp_overlap 523348, overlap 523340 GTGTCGCGCAGAAAA CCAACGTCG CCCT CAACGTGGG CGATCGTACCCGCAT Acid345_0445 523023 - 526544 + | hypothetical protein TERM 419 526561 - 526592 + F 100 -16.7 -5.95166 | gap 1 CATGCACACCTTCTC CCCCGACTCG-CAG ACCTC CTGGCGAGTCGGGG TTTTTTTTGATTCGC Acid345_0446 526694 - 527827 + | TPR repeat-containing protein Acid345_0447 528196 - 529512 + | outer membrane efflux protein TERM 420 529995 - 529985 - g 79 -6.8 -4.63932 | CATCTCGGAACAAAA CCTG GAG CAGG CGGAATCGGCAGAAG Acid345_0448 529509 - 530675 + | secretion protein HlyD TERM 421 531585 - 531560 - g 75 -9 -4.05033 | opp_overlap 531557, overlap 531561 531563 CGGATTCCAGAGAAA CGATGACGCC GTTGAG GGCGTCATCC TGATGCTTCGCGGAG TERM 422 531584 - 531561 - g 76 -12.5 -3.02698 | opp_overlap 531557, overlap 531560 531563 GGATTCCAGAGAAAC GATGACGCC GTTGAG GGCGTCATC CTGATGCTTCGCGGA Acid345_0449 530733 - 533816 + | heavy metal efflux pump CzcA TERM 423 534487 - 534504 + G 79 -6.9 -4.67635 | opp_overlap 534487 ATTCGAGGTGAAGCA CGTCGCC AACA GCCGACG TTTTGTGGTTTTCAG Acid345_0450 534074 - 537697 + | protease TERM 424 537739 - 537715 - f 100 -17.9 -3.14522 | opp_overlap 537727, overlap 537733 TGAACCCAGACTTAA CCCGGCCTCTC CGA GAGAGGCCAGG CAGTCCGGGGGATGC TERM 425 539222 - 539185 - g 74 -11.3 -3.57561 | opp_overlap 539212 GGTCAAGGTCCCAAA GAGTACCCTGTCAGATC CTTC GATCGGTCAGGATACCC CGATCTTCGCCGATG Acid345_0451 537782 - 540094 + | Ig-like, group 2 TERM 426 540149 - 540129 - T 100 -14.7 -4.6635 | opp_overlap 540129 AAAGTCCGAAGAAAA GGCCACCGA TTG CCGGTGGCC TTTTTGTTCACGTTT TERM 427 540129 - 540149 + T 100 -14 -5.11112 | opp_overlap 540129 AAAGTCCGAAGAAAA GGCCACCG ATTGC CGGTGGCC TTTTTGTTCACGTTT Acid345_0452 541611 - 540175 - | cytochrome c family protein TERM 428 541378 - 541364 - G 70 -2.1 -4.7373 | gap 1 CCACCTGACGAAAAA CCGTGA CGGA TC-CGG CGTTTTGCCAGAAAG Acid345_0453 541899 - 542531 + | molybdopterin oxidoreductase TERM 429 542672 - 542651 - g 71 -7.3 -4.15453 | CAACGCAGCCGAAAA CCACGTCAT GGCC ATGAAGTGG ATCCGTAAAGCGCAG Acid345_0454 542580 - 545030 + | formate dehydrogenase Acid345_0455 545027 - 547216 + | 4Fe-4S ferredoxin, iron-sulfur binding TERM 430 547604 - 547625 + G 93 -10.9 -4.55295 | overlap 547612 GGTGTACTTCGCTTC CTCGCATGG AAAC TCATGCGAG TTTATTTCTCGCCAA Acid345_0456 547220 - 548068 + | hypothetical protein Acid345_0457 548267 - 549862 + | porin, LamB type Acid345_0458 550455 - 549937 - | AsnC family transcriptional regulator TERM 431 550580 - 550542 - R 83 -9.6 -4.14764 | gap 1, overlap 550557 GTGTAAAGAAGGAAA TGGCCAGCAATCAACCC TTCAGT GGGG-GACTGCCGGCCA TCGAAGGTGCACTAC Acid345_0459 554173 - 550592 - | peptidase S8 and S53, subtilisin, kexin, sedolisin TERM 432 552509 - 552487 - G 70 -4 -4.56597 | CGCTGCCGGCAAAAA GCGAAACGTC CGG GATGTCGCGC ACCGTGTCTGCAGGT TERM 433 554476 - 554452 - H 74 -7.1 -4.33819 | opp_overlap 554468 ATGATTCATAAGAAA TAACCCAGGAG AGT CCCGTGGGTCA CTGCGTTCGTCCCCA Acid345_0460 554601 - 557975 + | integrin-like protein TERM 434 558017 - 557987 - f 100 -16.3 -3.62046 | gap 1 CTAGGCCGTCAATAA CCGGCGCT-CAATG GGTT CATTGCAGCGCCGG TCAGTCCTGGAAACT TERM 435 558093 - 558121 + F 71 -10.3 -3.25823 | opp_overlap 558093 558094 558098, overlap 558094 TACGAATCCCATGAA TGCAAGCTCCGTA ACT TGCGGAGATTGCG TTCGTCTGAGCGAGC TERM 436 559154 - 559175 + G 77 -7.9 -4.37092 | CACATCACCATATGG CCGAGGCCC TGAC GGTTCTCGG TTTTATCGCGGCGCT Acid345_0461 558664 - 560775 + | hypothetical protein Acid345_0462 560793 - 561578 + | electron transfer flavoprotein, beta-subunit Acid345_0463 561575 - 562573 + | electron transfer flavoprotein, alpha subunit Acid345_0464 562586 - 564268 + | acyl-CoA dehydrogenase-like TERM 437 565112 - 565155 + G 74 -13.9 -2.52516 | gap 2, overlap 565111 TGCAAGATCGGAGCG CTGTCGGCGACGGGATCGCGT CCTT ACGCGG-CCGG-CGCCGACGG ATTCGTGATGGGCGA TERM 438 566310 - 566297 - g 73 -3.1 -4.84363 | gap 1, overlap 566298 TCAAAGGACGAAAAA GCC-GT TGA ACAGGC GGAACTGGACCTGCG Acid345_0465 564329 - 572647 + | beta-ketoacyl synthase TERM 439 574060 - 574070 + GF 71 -8.2 -3.78934 | GCTCGATCGGATTAC GGCC AGC GGCC TTCTTCTGACCGACG Acid345_0466 572672 - 578260 + | carbamoyl-phosphate synthase L chain, ATP-binding Acid345_0467 578232 - 578930 + | 4'-phosphopantetheinyl transferase TERM 440 579083 - 579103 + T 95 -14.7 -3.64703 | GGCGTTGGATCGTAG GCTCCTCGC CAA GCGGGGAGC TTTGGATCAGGGAAC Acid345_0468 580229 - 579318 - | hypothetical protein Acid345_0469 581043 - 580237 - | hypothetical protein TERM 441 580702 - 580729 + g 81 -4 -5.08824 | opp_overlap 580695 580693 580705, overlap 580704 580705 CAGATACAGCATCGA GAAGCCGTTGCT GATA AGCATCGGCGTG TTTTTTCGGTCACGG Acid345_0470 582755 - 581040 - | hypothetical protein Acid345_0471 585130 - 582758 - | hypothetical protein Acid345_0472 587193 - 585199 - | cytochrome c family protein Acid345_0473 588040 - 587324 - | hypothetical protein Acid345_0474 590316 - 588037 - | periplasmic sensor signal transduction histidine kinase TERM 442 590092 - 590070 - G 70 -12 -2.78725 | opp_overlap 590058, overlap 590058 590067 ATATCGTACGAATGA GTCGCGCGAT CGT ATCGCGTGAC CACGGCCAACGTCCG Acid345_0475 591674 - 590313 - | two component, sigma54 specific, Fis family transcriptional regulator TERM 443 592035 - 592020 - g 70 -4.7 -4.46112 | CGCTACCTAAAGAAA CTTCG GGTGAT CGAAG AAAGCGCGAGGCATG TERM 444 593057 - 593037 - g 75 -9 -4.01158 | opp_overlap 593044 AACCGCATCAAAGAA CGCAATGC CCAGC GCATCGCG GAGTTCCTGGCAAAT Acid345_0476 591915 - 593282 + | 4Fe-4S ferredoxin, iron-sulfur binding TERM 445 593431 - 593387 - g 75 -8.5 -4.08216 | overlap 593363 CCATTCTGGGGAAAA GGTGACATCACCCTCTGCG GAACCAA CGAACAGGGCGCTGCCACC ACCATGAAGATCTTC Acid345_0477 593309 - 593587 + | hypothetical protein TERM 446 593617 - 593598 - T 77 -4.9 -4.87626 | overlap 593599 TGTGAAGAGTAAAAA TCCTCGC GCGGGG GCGAGGC TCGACGTCGGAGTCT Acid345_0478 593955 - 593737 - | hypothetical protein Acid345_0479 594368 - 593955 - | ferredoxin Acid345_0480 596279 - 594375 - | heat shock protein 70 Acid345_0481 597043 - 596279 - | heat shock protein DnaJ-like Acid345_0482 597538 - 597167 - | HesB/YadR/YfhF Acid345_0483 597995 - 597609 - | scaffold protein Acid345_0484 599368 - 598115 - | aminotransferase, class V Acid345_0485 599846 - 599409 - | BadM/Rrf2 family transcriptional regulator TERM 447 599631 - 599585 - G 73 -11.7 -3.1478 | overlap 599583 599625 ACGACGTCATGAACA GCGGA-CCTTCCAGCGCCCGGAT CAC ATCC-AGCGCCGAAATGCTCCGC GGATTGCGCGCCAGC TERM 448 600013 - 599991 - H 87 -8.4 -4.64657 | opp_overlap 599994, overlap 599994 TTAAAGCTCCAAAAA GAAGGCCGGA ATC TCCGACCTTT TTCGTCGTAATTCAT TERM 449 600010 - 599994 - H 88 -10.1 -4.42235 | opp_overlap 599994, overlap 599991 AAGCTCCAAAAAGAA GGCCGGA ATC TCCGACC TTTTTCGTCGTAATT TERM 450 599994 - 600010 + H 86 -7.9 -4.7871 | opp_overlap 599994 599991 AAGCTCCAAAAAGAA GGCCGGA ATC TCCGACC TTTTTCGTCGTAATT TERM 451 600250 - 600235 - H 80 -11.8 -3.37053 | opp_overlap 600225 600238, overlap 600216 ACACACCCGAACCAA GCCGGC TTCA GCCGGC GGTGCGGCCTTTGCT TERM 452 600962 - 600944 - g 93 -13.2 -4.15222 | opp_overlap 600943 AGCGTGTCGAAGAAA TCCTTCGC AAG GCGAAGGA ATTCATGCCGGGCCG Acid345_0486 600385 - 601527 + | hypothetical protein Acid345_0487 601899 - 601540 - | hypothetical protein TERM 453 601973 - 601997 + H 72 -11.5 -3.09516 | opp_overlap 601966 601965 601961 CAAGGAAGGATTGCA GTCATGCTTTG TAT CAGGGCATGAC TTCAGTCATGCCGAA TERM 454 602166 - 602144 - H 70 -9.9 -3.40522 | gap 1 ACTCTCCCAGGACAA CGTCGCACGC GTGT GCGTG-GACG GGAGAACTCATGATC Acid345_0488 602176 - 602547 + | response regulator receiver protein Acid345_0489 602579 - 603625 + | Alpha/beta hydrolase TERM 455 604501 - 604466 - g 82 -8.8 -4.4204 | AAGAAGCAGAAGAAA GACGCCGGTGCCGAGC CCGA GCACGAGTCCGACGTC CGCGTCATCAACCGC Acid345_0490 603968 - 606157 + | peptidase S9, prolyl oligopeptidase Acid345_0491 606864 - 606388 - | hypothetical protein Acid345_0492 607923 - 606907 - | beta-lactamase-like TERM 456 607120 - 607138 + g 76 -4.4 -4.8543 | overlap 607107 607106 607117 CGCGACCGTTTCGAC GGTCGGTT TCG ATCCGCCC TTTTTCTCGCCGTTG TERM 457 607970 - 607952 - R 100 -11.7 -4.79451 | opp_overlap 607952 ACCGGAAACAGAAAA CCCCTCG TTATG CGAGGGG TTCTGTAGAGTTGGT TERM 458 607952 - 607970 + r 81 -12.4 -3.52459 | opp_overlap 607952 ACCGGAAACAGAAAA CCCCTCGT TAT GCGAGGGG TTCTGTAGAGTTGGT Acid345_0493 608555 - 608205 - | hypothetical protein Acid345_0494 609770 - 608625 - | O-sialoglycoprotein endopeptidase TERM 459 609892 - 609916 + G 74 -11.4 -3.52714 | gap 1, overlap 609913 GGATTCATGGTCATC GCGTGGCTCGC GATT GCG-GCCGCGC TTCTGGTGCTTTTCT Acid345_0495 609838 - 611148 + | phospholipase D/transphosphatidylase Acid345_0496 611148 - 611888 + | endonuclease/exonuclease/phosphatase TERM 460 612350 - 612328 - g 70 -12.1 -2.71364 | CGATCCCCTGAACCA CGACGAAGT TCTCG ACTTCGTCG GCGGTCGCGCCGACC Acid345_0497 611909 - 613273 + | metal dependent phosphohydrolase TERM 461 613805 - 613830 + G 74 -8.3 -4.1891 | gap 1, opp_overlap 613805, overlap 613818 ACCTCAGCGAGATTA CCGGAGGCCG CGTCGAA CGG-CTCCGG TTTGTGTTACCCGGC Acid345_0498 613504 - 613863 + | hypothetical protein TERM 462 613892 - 613878 - g 86 -8.6 -4.69027 | AAAGTCACCGAAAAA GACGTA AAG TACGTC GCCGACCTGGCGAAC Acid345_0499 613860 - 614186 + | aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C Acid345_0500 614183 - 614482 + | hypothetical protein Acid345_0501 614484 - 615926 + | aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A TERM 463 615951 - 615968 + F 86 -10.5 -4.12603 | opp_overlap 615951 615949 TTCGGCTCCGAAACA GCCCTGC TCCG GCGGGGC TTGTTCTTTGGTAAC TERM 464 616341 - 616314 - f 86 -4 -5.30616 | gap 1, overlap 616315 TCACGGAAAGAAAAA GGGCTGGAAGGGC TGC GACCTCCCT-CCC GGACAAGCGAAAAAG TERM 465 616370 - 616356 - f 74 -4.2 -4.78149 | overlap 616359 CGGACAAGCGAAAAA GCATGG CTG CTATGC GCCAGTCGTCGCGCC TERM 466 616592 - 616623 + F 100 -16 -4.39166 | gap 1, opp_overlap 616587 TCTCACTAAAGGGTG CCCCATCCTGATCGC GAA GCGAT-AGGGTGGGG TTTTCCTCTCTAGCG Acid345_0502 618048 - 618779 + | hypothetical protein TERM 467 619015 - 619065 + T 100 -15.5 -3.18582 | overlap 619012 619016 GTTCTCGATCTCTGG GTGCCCCATTCTAGCGATTCACG TTTTT TGTGAAGCGCTAGGGTGGGGCGG TTCGTGGATGAAGTC TERM 468 619016 - 619064 + T 100 -19 -2.50935 | overlap 619012 619015 TTCTCGATCTCTGGG TGCCCCATTCTAGCGATTCACG TTTTT TGTGAAGCGCTAGGGTGGGGCG GTTCGTGGATGAAGT TERM 469 619101 - 619157 + T 86 -15.3 -2.87344 | opp_overlap 619103, overlap 619118 CTCTTTCCCGAACAA AATGCCCCACCCTAAGATTTCGCTC AAAGGCG GAGCGAAATCTTAGAATGGGGCACC TGTCTGAAAGACGTA TERM 470 619155 - 619103 - T 100 -26.7 -4.63218 | opp_overlap 619101 619118 CTTTCCCGAACAAAA TGCCCCACCCTAAGATTTCGCTC AAAGGCG GAGCGAAATCTTAGAATGGGGCA CCTGTCTGAAAGACG Acid345_0503 620028 - 619444 - | formylmethanofuran dehydrogenase, subunit E TERM 471 619499 - 619522 + g 83 -15.4 -2.8007 | overlap 619496 CGACACAACGTGCGC CCATCGCGAA TCAC TTCGCGATGG TAGTTAATCCCTTCG TERM 472 619640 - 619658 + g 75 -10.2 -3.75863 | overlap 619641 619651 619652 AGATCCTCATCGCTG AGCTCGCG ATA CGCGAGCA TTTGCTGCGCATTTT TERM 473 619641 - 619657 + g 76 -13.7 -2.84795 | overlap 619640 619651 619652 GATCCTCATCGCTGA GCTCGCG ATA CGCGAGC ATTTGCTGCGCATTT TERM 474 620342 - 620329 - H 70 -3.1 -4.72497 | gap 1 CACCGACGAATAAAA CGG-GT CGA ACTCCG GCAGCTTGATGGTGG TERM 475 620543 - 620564 + G 70 -3.6 -4.68724 | opp_overlap 620543, overlap 620530 620547 CCGTCCACGTAGAGA CCGCGGAC TTTCAT GTCCATGG TTTTGTCTTCGGTGG Acid345_0504 620494 - 621777 + | response regulator receiver modulated metal dependent phosphohydrolase Acid345_0505 621880 - 622668 + | glycosyl transferase family protein Acid345_0506 623152 - 622679 - | hypothetical protein Acid345_0507 624843 - 623407 - | periplasmic sensor signal transduction histidine kinase TERM 476 623544 - 623556 + g 84 -6.9 -4.83615 | TACCCGTGCCGGCGG CGGCG TAA CGCTG TTTTTCTCCGCGATA TERM 477 625458 - 625446 - g 75 -5.5 -4.57073 | overlap 625455 CAGGCGCTGGAAAAA CGCAT GAA ACGCG GTGATGTGTATCCCA Acid345_0508 624891 - 626012 + | osmosensitive K+ channel, histidine kinase sensor Acid345_0509 626012 - 626710 + | two component transcriptional regulator Acid345_0510 627349 - 629124 + | potassium-transporting ATPase subunit A Acid345_0511 629127 - 631160 + | potassium-translocating P-type ATPase, B subunit Acid345_0512 631168 - 631749 + | potassium-transporting ATPase, C subunit Acid345_0513 631850 - 632542 + | hypothetical protein Acid345_0514 634850 - 632535 - | alpha-1,2-mannosidase, putative TERM 478 633977 - 633990 + g 78 -6.7 -4.56775 | AATCCCAGCTCGGAA TCTCG CTCT CGAGA TTTTTAAGGGCGCCT TERM 479 634969 - 634947 - R 100 -14.9 -4.2461 | AGTGGCAGCAAGAAA GGCCCGAGT GTAGG ACTCGGGCC TCGAACGATGCACGG Acid345_0515 638430 - 634987 - | hypothetical protein TERM 480 635453 - 635471 + g 76 -4.4 -4.87133 | overlap 635455 AAGTCGGTGAGTGCC TTCCGGTC GAC GTCCGGCA TTTTGTTTACGCCAT TERM 481 637660 - 637684 + g 70 -3.6 -4.62302 | gap 1 GACATCGGTCACGCC CGTGTTC-TCG CTGA TGATGAGCACG TTTTTCCACGTCTTA TERM 482 637700 - 637712 + g 74 -6.9 -4.36914 | TTTTTCCACGTCTTA CCGCC GTC GGTGG TTTTGTAAAGCCCAC Acid345_0516 639086 - 638532 - | hypothetical protein TERM 483 638789 - 638805 + g 72 -4.4 -4.58283 | CCAGCATTCTGTCGG GCGGAA CATCT TTTCGC TTTTTGAACGGATTG TERM 484 638892 - 638907 + g 72 -4.7 -4.56597 | GCCGAACTTCTTCTC GATCG CGTCGC CGATC TTTTTCGCGAGCGCG Acid345_0517 639538 - 639107 - | hypothetical protein Acid345_0518 640368 - 639676 - | hypothetical protein Acid345_0519 641864 - 640368 - | hypothetical protein TERM 485 641055 - 641071 + g 71 -7.9 -4.0162 | CTCCGACGGTTTCCA TCGGCGC TCG GCGACGA TTTGTGGTGTCCAGG TERM 486 641880 - 641894 + H 70 -3.4 -4.6902 | overlap 641880 641882 ATTTCTCTCCGGAGT GCTGGG AGT CCCGCC TTTTTAGCATTATGC Acid345_0520 642001 - 644256 + | periplasmic sensor hybrid histidine kinase Acid345_0521 644604 - 644260 - | hypothetical protein Acid345_0522 645069 - 644704 - | hypothetical protein Acid345_0523 645247 - 645702 + | hypothetical protein Acid345_0524 645681 - 645950 + | hypothetical protein Acid345_0525 646615 - 645947 - | ECF subfamily RNA polymerase sigma-24 factor TERM 487 646166 - 646197 + g 70 -4.4 -4.44046 | gap 1, overlap 646162 ATAGATGTTCGGCAA TTCGCG-GATTGCCC GCC GGATCATCTCGCGAA TTTCTTTGCGCTCCA TERM 488 646730 - 646704 - H 81 -8.2 -4.35742 | opp_overlap 646707 ATGGAATTAGGAAAA GAATTTTGAACA CAA TTTTCAAAATTC CGTGTAACTTCCTTG Acid345_0526 646849 - 647151 + | hypothetical protein TERM 489 647163 - 647194 + F 83 -13 -3.27298 | opp_overlap 647156 CTAGTTAATCGCTCC CGGAGGGCCGGA TGCGAGAT TCCGGCCCTCAG TTCCTCCTTCCAAAC Acid345_0527 647224 - 648102 + | hypothetical protein Acid345_0528 648099 - 648932 + | hypothetical protein Acid345_0529 648960 - 649454 + | DoxX TERM 490 650378 - 650397 + G 75 -9.3 -3.83323 | GGTGCAGATGCCGGC GCGCTCA CATTCA TGAGCGC TTTCAATTCTCTGAA TERM 491 650907 - 650874 - g 100 -11.7 -4.55287 | gap 1, overlap 650875 CGGATGTACACAAAA TCGCCGTCGTCGGGCC CAT GGC-CGACGACGCGGA AGACATGCTCGGCGC TERM 492 650905 - 650875 - g 86 -14.1 -3.3269 | gap 2, overlap 650874 GGATGTACACAAAAT CGCCGTCGTCGGGCC CAT GGC-CGACGACG-CG GAAGACATGCTCGGC Acid345_0530 649631 - 651886 + | glycoside hydrolase family protein TERM 493 651907 - 651930 + T 100 -12.4 -5.06414 | opp_overlap 651908, overlap 651908 CCCGAACCAACTGAA AGGGCTGGCA ACGC TGCCAGCCCA TTTTTGTTGGCCGCC TERM 494 651908 - 651929 + T 100 -15.9 -3.63367 | opp_overlap 651908, overlap 651907 CCGAACCAACTGAAA GGGCTGGCA ACGC TGCCAGCCC ATTTTTGTTGGCCGC TERM 495 651929 - 651908 - T 100 -15.9 -3.81027 | opp_overlap 651908 651907 CCGAACCAACTGAAA GGGCTGGCA ACGC TGCCAGCCC ATTTTTGTTGGCCGC Acid345_0531 653302 - 651950 - | hypothetical protein TERM 496 653365 - 653339 - R 100 -17.3 -4.4846 | opp_overlap 653357 TAATCCAAGAAGAAA GGCGGTGACCC GAGGT GGGCCACCGCC GAGTGGAGGGTTCGT Acid345_0532 656871 - 653386 - | hypothetical protein TERM 497 655918 - 655900 - G 80 -10.4 -4.00486 | overlap 655903 655910 TTCATAAGAGAAGAA GAAGAACA ACT TGTTCTTC ACAATCGGGCCACCG TERM 498 657126 - 657104 - g 78 -9.8 -4.07568 | TGCCTCGGCGTAAAA CGATGCCCCC TCC GCGGACATCG TCGGACCATAAAAAA Acid345_0533 657088 - 658173 + | LacI family transcription regulator Acid345_0534 658170 - 659345 + | major facilitator transporter Acid345_0535 659452 - 660660 + | hypothetical protein TERM 499 660704 - 660675 - T 95 -15.1 -3.66874 | opp_overlap 660681 660702, overlap 660677 660681 GCAATTTCACTCAAA CAGAAATGGCGGC TGAA GCCGCCATTTCTT ACAACTAAGTTCGTT TERM 500 660702 - 660677 - T 100 -17.7 -3.41341 | opp_overlap 660681, overlap 660675 660681 AATTTCACTCAAACA GAAATGGCGGC TGAA GCCGCCATTTC TTACAACTAAGTTCG TERM 501 660681 - 660698 + T 95 -12.7 -4.16842 | opp_overlap 660681 660677 660675 TCACTCAAACAGAAA TGGCGGC TGAA GCCGCCA TTTCTTACAACTAAG TERM 502 660698 - 660681 - T 100 -12.7 -4.35044 | opp_overlap 660681, overlap 660677 660675 TCACTCAAACAGAAA TGGCGGC TGAA GCCGCCA TTTCTTACAACTAAG Acid345_0536 663082 - 660752 - | hypothetical protein TERM 503 663064 - 663081 + g 71 -12.7 -2.55253 | opp_overlap 663064 GCGTGCAAAGGAAAA TGGCGGC CGAA GCCGCCA TCCCTTCAAATTCAT TERM 504 663081 - 663064 - G 100 -12.7 -4.54727 | opp_overlap 663064 GCGTGCAAAGGAAAA TGGCGGC CGAA GCCGCCA TCCCTTCAAATTCAT Acid345_0537 664858 - 663104 - | phosphoenolpyruvate carboxykinase TERM 505 664308 - 664330 + g 74 -7.8 -4.15044 | ATCTCGCGAGCTTCG GGGAAATGCA CAA TGTATTTCTC TTTGTTGCACGGCCA TERM 506 664769 - 664793 + g 83 -7.8 -4.56314 | opp_overlap 664763 664764 CTTTATAAAGGTGCC GTTCTGCACC AGGTC GGCGCAGAGC TTTTCGTTCTCTTCG TERM 507 664869 - 664882 + r 77 -3.8 -5.04249 | GCCATCTTTTCCACC CACC GCAGCA GGTG TTTGTTTTTTGCCAA TERM 508 664898 - 664912 + r 72 -11.4 -3.13788 | overlap 664896 664893 TTTGTTTTTTGCCAA CGGCAC GTC GTGCCG TGTCTTCGGTTCGCT TERM 509 664956 - 664972 + r 74 -6.5 -4.30719 | GCCATTTTTCACCTC GCGCG CACCAGA CGCGC TTTATTCTCCGCCAG Acid345_0538 665549 - 665151 - | hypothetical protein Acid345_0539 667578 - 665584 - | hypothetical protein Acid345_0540 669514 - 667547 - | hypothetical protein TERM 510 668304 - 668294 - GR 77 -8.2 -4.14392 | GCCGAACGGGCAAAA CGGG CTC CCCG GATCGAGGTAAATAT TERM 511 668656 - 668681 + gr 86 -6.7 -4.87665 | opp_overlap 668650, overlap 668657 TCGACGAAATCACGC TGGCGAGGTCC TTCT GGATCGCGCCC TTTTTGTCCATGAAG TERM 512 668657 - 668680 + gr 74 -10.2 -3.52117 | opp_overlap 668650, overlap 668656 CGACGAAATCACGCT GGCGAGGTCC TTCT GGATCGCGCC CTTTTTGTCCATGAA TERM 513 669811 - 669831 + r 71 -10.3 -3.17392 | opp_overlap 669811 GCCCCAACTACAAAA GGCACCCGG GTC TCGGGCGCC TTCGGTTACGAACTA TERM 514 669831 - 669811 - R 100 -11.8 -4.5442 | opp_overlap 669811 GCCCCAACTACAAAA GGCACCCG GGTCT CGGGCGCC TTCGGTTACGAACTA Acid345_0541 670359 - 669853 - | hypothetical protein Acid345_0542 670957 - 670448 - | hypothetical protein TERM 515 671205 - 671186 - R 100 -16.4 -5.10933 | CCATGCAAAAGAAAA CGCCCGGC GCAC GCCGGGCG TCTCACGCAACCTGA Acid345_0543 671722 - 671225 - | hypothetical protein Acid345_0544 672766 - 671999 - | hypothetical protein Acid345_0545 673290 - 672763 - | ECF subfamily RNA polymerase sigma-24 factor TERM 516 673464 - 673437 - R 71 -7.6 -3.95219 | opp_overlap 673436 CGCAAAGGTGACAAA CCCGCAGGGC CTTTGATT GCCTCGCGGG AGCCGGAACGGTGCT Acid345_0546 676058 - 673563 - | hypothetical protein Acid345_0547 676675 - 676139 - | hemerythrin HHE cation binding protein TERM 517 676754 - 676722 - R 100 -12.7 -4.56597 | opp_overlap 676725, overlap 676726 CGTTCGGCGCAAAAA GAAAGGACCGCGG TTTTTCG CCGCGGCCCGTTC CATGGTGTCAATGCC TERM 518 676750 - 676726 - R 100 -12.1 -4.85782 | opp_overlap 676725, overlap 676722 CGGCGCAAAAAGAAA GGACCGCGG TTTTTCG CCGCGGCCC GTTCCATGGTGTCAA Acid345_0548 677308 - 676769 - | hypothetical protein TERM 519 676854 - 676870 + g 70 -5.1 -4.4448 | TTCGCGGGCTTCTTG GCTGC TTTCTTT GCAGC TTTCTTTGCGGCTTT Acid345_0549 679524 - 677608 - | lytic transglycosylase, catalytic TERM 520 678663 - 678684 + g 78 -6.5 -4.60487 | gap 1, opp_overlap 678663 AGAGATCTTTCAAAT GCCGTGCCGC TGC GCG-CGTGGC TTTTTCCGGATCCTG Acid345_0550 680603 - 679677 - | peptidase T2, asparaginase 2 Acid345_0551 681416 - 680745 - | CDP-alcohol phosphatidyltransferase Acid345_0552 681883 - 681413 - | GreA/GreB family elongation factor Acid345_0553 682130 - 682690 + | CarD family transcriptional regulator TERM 521 682709 - 682726 + F 100 -12.7 -5.22289 | opp_overlap 682709 ACTAGTTGGTTAACA CGCAGCC TGCG GGCTGCG TTTTTCTATTTCGTG TERM 522 682726 - 682709 - f 81 -12.7 -3.0263 | opp_overlap 682709 ACTAGTTGGTTAACA CGCAGCC TGCG GGCTGCG TTTTTCTATTTCGTG Acid345_0554 682778 - 683041 + | hypothetical protein Acid345_0555 684250 - 683108 - | hypothetical protein Acid345_0556 684316 - 684777 + | Holliday junction resolvase YqgF TERM 523 684901 - 684889 - f 71 -4.7 -4.57073 | overlap 684891 TAGGCTGCTGAAAAA CCGTG CTT CGCGG CAACACAGGTATCAG TERM 524 684967 - 684954 - f 75 -3.7 -4.86001 | overlap 684955 ACGAGTCCAGAAAAA CGGGC TTTA GCCCC TGCAATCCACCGCAG Acid345_0557 685027 - 686007 + | aminodeoxychorismate lyase Acid345_0558 686150 - 687082 + | hypothetical protein TERM 525 687246 - 687280 + F 88 -11.4 -4.07568 | opp_overlap 687244 687246 687248, overlap 687252 TATTCTGGAAATAGA TAGAGAGCGGGGCAGA AAT TCTGTCCCGCTTTCGC TTTTGGGGGAGGAAG TERM 526 687278 - 687248 - f 95 -14 -3.18571 | opp_overlap 687246 687252, overlap 687246 687244 TTCTGGAAATAGATA GAGAGCGGGGCAGA AAT TCTGTCCCGCTTTC GCTTTTGGGGGAGGA TERM 527 687252 - 687274 + F 100 -15.6 -3.92659 | opp_overlap 687248 687246 687244, overlap 687246 GGAAATAGATAGAGA GCGGGGCAGA AAT TCTGTCCCGC TTTCGCTTTTGGGGG Acid345_0559 687295 - 688455 + | ABC efflux pump, inner membrane subunit TERM 528 688457 - 688490 + T 78 -6.7 -4.64766 | opp_overlap 688463, overlap 688458 TGGCGTATGAGTAGG ACGTAATCTCCGCAA AATG TGGCGGAGATTAGGA TTTTTGACGTATGGC TERM 529 688458 - 688489 + T 73 -10.2 -3.38378 | opp_overlap 688463, overlap 688457 GGCGTATGAGTAGGA CGTAATCTCCGCAA AATG TGGCGGAGATTAGG ATTTTTGACGTATGG TERM 530 688500 - 688525 + T 100 -17.7 -3.43071 | TTAGGATTTTTGACG TATGGCTGCGC ATTG GCGCAGCCATA TTCATTGCTCTCCCA Acid345_0560 689606 - 688548 - | TonB-like protein rplM 689686 - 690114 + | 50S ribosomal protein L13 Acid345_0562 690144 - 690539 + | SSU ribosomal protein S9P Acid345_0563 690743 - 691648 + | SSU ribosomal protein S2P TERM 531 691672 - 691698 + F 85 -13 -3.60098 | CCAGAGCTTTCCATC TGACCCGCGTGA AAC TGGCGCGGGTCA TTTCACATAAGGCCT Acid345_0564 691759 - 692175 + | glyoxalase/bleomycin resistance protein/dioxygenase TERM 532 692363 - 692324 - g 72 -6.3 -4.27117 | overlap 692325 TCGTGAGAAGACAAA CGCCCCGATGATGGACT GCAAGA AGGCCCTCACCGAGGCC AACGGCGACATCGAG TERM 533 692677 - 692646 - g 74 -2.2 -4.93968 | gap 1, overlap 692648 692674 ATGGAGAAGGAAAAA GAGATCTATCGCGAC CAG GCCGCGA-AGACCGG CAAGCCGGCTCCGGT TERM 534 692675 - 692648 - g 78 -9.2 -4.08682 | gap 1, overlap 692646 692674 GGAGAAGGAAAAAGA GATCTATCGCGAC CAG GCCGCGA-AGACC GGCAAGCCGGCTCCG Acid345_0565 692277 - 692936 + | translation elongation factor Ts (EF-Ts) TERM 535 692960 - 692979 + T 100 -11.4 -5.69262 | opp_overlap 692958 692960 CACGTGAATGAAAGA GGGTGGCT GAAA AGCCGCCC TTTTTATTTTTCTAC Acid345_0566 694167 - 692983 - | hypothetical protein TERM 536 693739 - 693753 + g 71 -7.8 -3.96624 | GAGCGTGAAGGCGAT GTTGCC AGA GGCGAC TTTGTCGTAGAGATC Acid345_0567 694213 - 694716 + | phosphopantetheine adenylyltransferase Acid345_0568 694732 - 695931 + | L-aspartate aminotransferase TERM 537 695972 - 695940 - f 100 -14.9 -4.19238 | opp_overlap 695937 695967, overlap 695941 CCTTTAATTTCAAAA TCCCCACGTCTCG AAAATCG CGAGACGTGGGGC ACCCGTTCTGGCCAG TERM 538 695971 - 695941 - f 100 -18.4 -3.11222 | opp_overlap 695937 695967, overlap 695940 CTTTAATTTCAAAAT CCCCACGTCTCG AAAATCG CGAGACGTGGGG CACCCGTTCTGGCCA Acid345_0569 696042 - 697019 + | mannose-6-phosphate isomerase Acid345_0570 697016 - 698131 + | mannose-1-phosphate guanylyltransferase (GDP) Acid345_0571 698134 - 699552 + | phosphoglucosamine mutase TERM 539 699626 - 699652 + F 70 -6.5 -4.21922 | overlap 699627 GAGTTCGACGTAACC GCGCGGGCAAT GTAAG ATTGCCCGCAA TTTCGTTTTCGCTCA TERM 540 700114 - 700138 + G 76 -12.1 -3.40052 | overlap 700113 700117 ATCGGGTTCACCGTC CTGCTGGCGCA GCT TGCGCCGGTGG TGTTATTCCCGATCT TERM 541 700117 - 700135 + G 70 -12.4 -2.85545 | overlap 700114 700113 GGGTTCACCGTCCTG CTGGCGCA GCT TGCGCCGG TGGTGTTATTCCCGA TERM 542 700810 - 700782 - g 71 -11 -3.30159 | gap 1, overlap 700783 GGAAGCGGCGGAGAA GTGGCGGGAGCGG CAGG CCG-TCCCGCCAA GCGAGACACCCGCGA TERM 543 700809 - 700783 - g 78 -14.5 -2.57881 | gap 1, overlap 700782 GAAGCGGCGGAGAAG TGGCGGGAGCGG CAGG CCG-TCCCGCCA AGCGAGACACCCGCG Acid345_0572 699667 - 700836 + | Ste24 endopeptidase Acid345_0573 701694 - 700906 - | 3-deoxy-D-manno-octulosonate cytidylyltransferase TERM 544 702625 - 702650 + G 79 -6.9 -4.61199 | gap 1, opp_overlap 702642, overlap 702624 GGGCCGGATGCGCTC TCCGC-GTATGC AGA GTATGCGGCGGA TTTTCTGTATCCGCT Acid345_0574 701716 - 703608 + | FAD dependent oxidoreductase Acid345_0575 704447 - 703611 - | polyphosphate:AMP phosphotransferase Acid345_0576 704565 - 705704 + | asparagine synthetase AsnA TERM 545 705721 - 705740 + T 100 -10.7 -5.37593 | opp_overlap 705721 TGTTGGATTCGGAAA GGCGCTG CCGCGA CAGCGCC TTTTTTCGTTTCGGC TERM 546 705740 - 705721 - T 77 -11.4 -3.57144 | opp_overlap 705721 TGTTGGATTCGGAAA GGCGCTGC CGCG ACAGCGCC TTTTTTCGTTTCGGC Acid345_0577 706727 - 705756 - | aldo/keto reductase Acid345_0578 708002 - 706761 - | hypothetical protein Acid345_0579 709859 - 708066 - | Beta-glucuronidase TERM 547 709928 - 709909 - R 100 -15 -4.96773 | GGAAGGAAAAAGAAA GCGGGAGC CGAA GCTCCCGC AAACTCAAGATGATG Acid345_0580 710877 - 709948 - | hypothetical protein TERM 548 710258 - 710205 - G 74 -7.4 -4.37886 | gap 1, opp_overlap 710208 710211 CGATGCCGGAGAAAA CAAC-GCCGGTGCCGCTCGCCGTTA GTGGG TAACTGCCAGCGCGACCGCCCGTTG ATGTCGCGGTGGACG Acid345_0581 711647 - 711015 - | SOS-response transcriptional repressor, LexA TERM 549 711412 - 711375 - G 71 -7.5 -4.15788 | gap 1, overlap 711376 AATGCGGCCAAGAAA CGGCAGCC-CCGCGGTCG CTA CGGCAGCAGCGGCGGCCA TGGACTTCTTAAGCT Acid345_0582 711988 - 712344 + | hypothetical protein Acid345_0583 712481 - 715093 + | diguanylate cyclase with GAF sensor Acid345_0584 715120 - 716067 + | thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes Acid345_0585 716339 - 716064 - | hypothetical protein TERM 550 716546 - 716566 + H 74 -8.2 -3.96841 | overlap 716547 716549 TGCTGGCAGCAGGAT CCTCCGCG CCCGC CGCGGACG TTGTGTTTCTTCCCG Acid345_0586 716784 - 717107 + | ferredoxin Acid345_0587 717150 - 717713 + | ECF subfamily RNA polymerase sigma-24 factor Acid345_0588 717710 - 718228 + | hypothetical protein Acid345_0589 718225 - 718716 + | hypothetical protein TERM 551 718756 - 718737 - T 100 -10.7 -4.72272 | opp_overlap 718735 718732 GCCTTGCAGCAAAAA CGCCTCC TGATTG GGAGGCG TCTGCATTTCTACCG Acid345_0590 719664 - 718780 - | TPR repeat-containing protein TERM 552 719791 - 719747 - R 100 -14.1 -4.61873 | opp_overlap 719752 GCCCAGAAAGTAAAA CGCGACGGGCAATCCGTTCCC TAT GAGGCCGGACCGCTCGCCGCG TGAAAACTACTTCGA Acid345_0591 720523 - 719798 - | OmpA/MotB family outer membrane protein TERM 553 720614 - 720641 + r 73 -9.1 -3.85817 | opp_overlap 720616 GTAGTGCATCCAGAG TACCCCAGCGG AGAGCG CTGCCGGGGTA TTTCTGCCGAAAAGT Acid345_0592 721986 - 720670 - | TolB-like protein TERM 554 720949 - 720939 - G 71 -6.8 -4.13767 | GCGTCCACGCGAAAA CCAG GAA CTGG CCGTTCGGTGACCAC TERM 555 721403 - 721430 + g 70 -4.8 -4.55295 | opp_overlap 721422 GTAATCGGCTTCTGG TTTGAGCCGTCG TAAT CCATGGCCCAAA TTTCTTTGTGCCCCG Acid345_0593 722914 - 722111 - | TonB-like protein TERM 556 722565 - 722579 + g 70 -2.7 -4.72188 | overlap 722557 TCGCGCGGTGCAGGA GGCGC TTTCT GCGGC TTTGTTTTCGCTTGC TERM 557 722612 - 722628 + g 85 -9.3 -4.42062 | overlap 722615 722618 GTCCGGGATCGCAAT CGCCTCC GGC GGCGGCG TTTCTTTCACCGCTG TERM 558 722892 - 722835 - G 71 -10.5 -3.5393 | gap 1, opp_overlap 722842 722849, overlap 722836 ATCACCGCCGTCAAA CCGACGTGCATCACCG-TGGACGCCACC AGC GACGGCGCCCAGCGTTCATGCTCTTCGA AAATTTCAGCGCGTA TERM 559 722891 - 722836 - G 70 -11.8 -2.72144 | gap 1, opp_overlap 722842 722849, overlap 722835 TCACCGCCGTCAAAC CGACGTGCATCACCG-TGGACGCCACC AGC GACGGCGCCCAGCGTTCATGCTCTTCG AAAATTTCAGCGCGT Acid345_0594 723329 - 722898 - | biopolymer transport protein ExbD/TolR Acid345_0595 724037 - 723330 - | MotA/TolQ/ExbB proton channel TERM 560 725450 - 725434 - g 70 -12.3 -2.74248 | overlap 725433 GAAGATGGTCGAAAC CGAGGTC AAC GACCTCG CCATGAAAGCCCGCT Acid345_0596 724268 - 725986 + | DNA repair protein RecN TERM 561 726045 - 726074 + F 73 -10.9 -3.33261 | opp_overlap 726044 726045, overlap 726050 AAATTATTCATAAAT CGAAATACTAGTG TTTA TGCTAGTATTTCG TTATGAAACTTGGGG Acid345_0597 726181 - 726801 + | hypothetical protein Acid345_0598 726933 - 728762 + | pyruvate flavodoxin/ferredoxin oxidoreductase-like TERM 562 729663 - 729645 - g 93 -12.4 -4.38712 | opp_overlap 729644 729643 729652 TGGAGTCGCACAAAA CCGGCGAG ATG CTCACCGG CGTCTTCTACGTGAA Acid345_0599 728762 - 729802 + | 2-oxoglutarate ferredoxin oxidoreductase subunit beta TERM 563 729818 - 729845 + F 95 -14.2 -3.51232 | opp_overlap 729823, overlap 729823 ATTGTGTTCGTGATT CCAAAGCCTCCG GCGA CGGAGGCTTTTG TTCATTTAGAACGCA TERM 564 729840 - 729823 - f 85 -12.7 -3.59979 | opp_overlap 729818 729823 GTTCGTGATTCCAAA GCCTCCG GCGA CGGAGGC TTTTGTTCATTTAGA TERM 565 729823 - 729840 + F 100 -12.7 -4.84642 | opp_overlap 729823, overlap 729818 GTTCGTGATTCCAAA GCCTCCG GCGA CGGAGGC TTTTGTTCATTTAGA Acid345_0600 730289 - 731335 + | ECF subfamily RNA polymerase sigma-24 factor TERM 566 731630 - 731652 + G 86 -14.2 -3.28791 | opp_overlap 731625 CAGGGAAACAGCCGG CAGGCGAAGG CGA TCTTCGCCTG TTATCACCGCGGCAT Acid345_0601 731387 - 732553 + | hypothetical protein TERM 567 732574 - 732593 + F 100 -16.4 -3.55444 | CGATTTTTTCGCCGA GGCGCGGG GCCA CCCGCGCC TTTGCCGACTCCAAA Acid345_0602 733007 - 734215 + | glycosylasparaginase TERM 568 734244 - 734270 + F 100 -14.4 -4.86731 | TCATTTCCTGCCATT CGGCCTCGCG GTTCTTA CGCGGGGCCG TTTTCTTTGCGAAGA Acid345_0603 734326 - 734976 + | multiple antibiotic resistance MarC-related protein Acid345_0604 735097 - 737733 + | TPR repeat-containing serine/threonin protein kinase Acid345_0605 737758 - 738093 + | hypothetical protein TERM 569 738115 - 738133 + F 100 -13.8 -4.36595 | GCGGGTTCGCTTTCA GGCGGCCG GGA TGGCCGCC TTTTCAATTTGGATC Acid345_0606 738225 - 738788 + | hypothetical protein TERM 570 739747 - 739757 + G 72 -4.6 -4.67353 | overlap 739738 GAATCGGCGGCGGCT GGGC GCT GCTC TTTTTCACTACCTAC TERM 571 740961 - 740997 + G 74 -6 -4.42386 | overlap 740940 740988 ACGCCACACCATTTG CCGTGGCGCATTG-GATC TTT GATCGCAAT-TGCTGCGG TTTTCTACATCGCGG Acid345_0607 738900 - 742736 + | hypothetical protein Acid345_0608 742733 - 743626 + | peptidase M48, Ste24p TERM 572 743654 - 743629 - T 100 -14.7 -4.79352 | GGATCGAGAATAAAA GCCCATCTCGC CAGG GCGGGATGGGC TCCTGGATCGAAGCG glpX 744689 - 743673 - | fructose 1,6-bisphosphatase II TERM 573 744761 - 744733 - R 76 -11.8 -3.09273 | opp_overlap 744736, overlap 744736 GCTGCCCAACACACA TCAGCCCATGGT GCGCG ACCATGGGCTTA GTGCGAACTGAAAAT TERM 574 744736 - 744758 + r 84 -13.5 -3.14931 | opp_overlap 744733 744736 GCCCAACACACATCA GCCCATGGT GCGCG ACCATGGGC TTAGTGCGAACTGAA TERM 575 744758 - 744736 - R 79 -13.5 -2.75975 | opp_overlap 744736, overlap 744733 GCCCAACACACATCA GCCCATGGT GCGCG ACCATGGGC TTAGTGCGAACTGAA Acid345_0610 745968 - 744790 - | acyl-CoA dehydrogenase-like Acid345_0611 746204 - 746527 + | hypothetical protein Acid345_0612 746569 - 747744 + | beta-lactamase Acid345_0613 747987 - 747745 - | hypothetical protein Acid345_0614 748464 - 747991 - | hypothetical protein TERM 576 748554 - 748526 - R 100 -16.7 -3.494 | opp_overlap 748550 CAAGGTTGTAGAGAA GCCGGGCTGTGAA ATT TCCGCAGCCCGGC CCGAATCGCTAATTG Acid345_0615 750722 - 748563 - | prolyl oligopeptidase TERM 577 749078 - 749088 + g 87 -6.8 -5.02323 | CTGCCGCGAAGTAGT CGTC GAA GACG TTTTGTTTGTGCTCG TERM 578 750540 - 750563 + g 74 -8.1 -4.10672 | opp_overlap 750537 GTCAGTAATTGATAC CCCGTGGAT CATCTC AGCCACGGG TTTGATTTCGGTTGC TERM 579 750586 - 750611 + g 71 -6.8 -4.18018 | TCGGTTGCGGGCGGA GGAGGAAGCG TAATCC CGTTTCCACC TTTTACCTGGGCGGG Acid345_0616 753339 - 750751 - | ABC efflux pump, inner membrane subunit TERM 580 752575 - 752559 - G 72 -6.5 -4.26903 | GGGAGGGGATGAAAA TGTCGGC GTC GCGGACA GGGAAGAGAAACGAT Acid345_0617 753675 - 753349 - | PadR family transcriptional regulator TERM 581 753885 - 753854 - R 95 -8 -5.03994 | gap 1, overlap 753855 753856 GGGTAGACACAAAAA TGGCGCCGGGGGA AACACCG TACCCCGGCGC-A CTGGGGAAATGCGCG TERM 582 753885 - 753855 - R 74 -9.6 -3.61674 | overlap 753854 753856 GGTAGACACAAAAAT GGCGCCGGGGGA AACACCG TACCCCGGCGCA CTGGGGAAATGCGCG TERM 583 753884 - 753856 - R 76 -13.1 -2.76281 | overlap 753854 753855 GTAGACACAAAAATG GCGCCGGGGGA AACACCG TACCCCGGCGC ACTGGGGAAATGCGC TERM 584 753916 - 753895 - R 77 -11.5 -3.55444 | opp_overlap 753890 GGCGCACTGGGGAAA TGCGCGGCC TATT GGTCGCGCA AGGTCTTCATCGGGT Acid345_0618 756371 - 753903 - | ABC efflux pump, inner membrane subunit Acid345_0619 759001 - 756569 - | ABC efflux pump, inner membrane subunit TERM 585 757594 - 757637 + g 91 -12.6 -3.96216 | GAAACTTTGCAGGAT CGTGATAGC-GCGCGTCATC GAGGGA GA-GACGCGCGGCCATCACG TTGTTTGCGTCGAAG TERM 586 759219 - 759207 - R 77 -7.7 -4.26189 | overlap 759199 GCAGAAACCCGAAAA CTGCT TCG AGCAG TTCCACGCTCGTAAC Acid345_0620 760333 - 759281 - | radical SAM family Fe-S protein TERM 587 760430 - 760453 + r 90 -8.2 -4.68103 | opp_overlap 760430 GCCGGTCCTCAGCAA GGCGAAAG AGGGAGTA CTTTCGCC TTTTGTTCGCCTTGC TERM 588 760561 - 760511 - R 100 -15.7 -4.41895 | gap 1, opp_overlap 760517, overlap 760517 AAGTGGGAAGGAAAA TAAAAACCCCATCCTGCT-GCG AGAATTGA CGCGAGCAGGACGGGGTTTTGA GCGTTACTTTTGTTC TERM 589 760555 - 760517 - R 100 -14.7 -5.54338 | gap 1, opp_overlap 760517, overlap 760511 GAAGGAAAATAAAAA CCCCATCCTGCT-GCG AGAATTGA CGCGAGCAGGACGGGG TTTTGAGCGTTACTT TERM 590 760517 - 760555 + r 95 -12.5 -4.15508 | gap 1, opp_overlap 760517 760511 GAAGGAAAATAAAAA CCCCATCCTGCT-GCG AGAATTGA CGCGAGCAGGACGGGG TTTTGAGCGTTACTT Acid345_0621 762742 - 760565 - | peptidase M16-like TERM 591 760833 - 760881 + g 100 -8.8 -4.99043 | opp_overlap 760826, overlap 760866 AGATACCAGGTGGCG TCGGCGCCGTCGGCGTTAATCT TCAGC ACGTTGGCTTCGACGTCGCCGA TTTTCTTTGTACCGG TERM 592 762158 - 762172 + g 74 -7.8 -4.14392 | GGCGTAGGGATTGTC CTTGCC GTA GGCGAG TTTTCCGGCTTCGCG Acid345_0622 764253 - 762742 - | peptidase M16-like Acid345_0623 766186 - 764450 - | carbamoyltransferase TERM 593 766760 - 766777 + G 76 -12.7 -3.05384 | AGCATCGAGGTTGCC CGCGCCT GGGA AGGCGCG TTCCATGAAGCGAAG TERM 594 767296 - 767274 - g 100 -12.7 -5.4833 | GCAGCCAACAAAAAA GGCTGGCGC GGAGG ACGCCAGCC GGAGGCAACGAGTTC Acid345_0624 766313 - 767350 + | hypothetical protein Acid345_0625 771215 - 767319 - | Cna B-type protein TERM 595 767521 - 767548 + g 73 -11.2 -3.40498 | overlap 767519 767544 TTCGAAATGCTCATG TCCACGGCGAAG TAGC CATCGCCGCGGA TGTTGTTACGACTTC TERM 596 772137 - 772110 - g 71 -11.2 -3.21199 | CATCGAGCAACTGAA CGCGGCGGTCTC GGAT GAGACCTGCGCG ATCGTGATCGAGCCA Acid345_0626 771541 - 772821 + | acetylornithine aminotransferase TERM 597 772849 - 772824 - f 95 -10.4 -4.63218 | overlap 772826 CGCGGCGCAATAAAA TCGGGGAGCC GAGGTG GGCTCCCCTA AGAAGCGACAGAGGC TERM 598 772847 - 772826 - f 75 -13 -2.62244 | overlap 772824 CGGCGCAATAAAATC GGGGAGCC GAGGTG GGCTCCCC TAAGAAGCGACAGAG Acid345_0627 772913 - 773782 + | Alpha/beta hydrolase Acid345_0628 773783 - 774382 + | hypothetical protein Acid345_0629 774434 - 774724 + | hypothetical protein TERM 599 774800 - 774813 + G 72 -9.5 -3.72324 | overlap 774809 CGAAGATTGATCGCG GCGCG TGGG CGCGC TTCTTCATCGCGATC TERM 600 775216 - 775231 + G 71 -10.4 -3.50853 | CTGTTTGCCGGCAGT GTCGCG ATGG CGCGAC TTGTGCTTCGCAACA Acid345_0630 774757 - 776145 + | hypothetical protein Acid345_0631 776267 - 776695 + | signal-transduction protein Acid345_0632 778408 - 776918 - | hypothetical protein Acid345_0633 778617 - 779183 + | hypothetical protein TERM 601 779205 - 779240 + F 100 -11.2 -4.85599 | gap 1, opp_overlap 779197 779205 ATCACAATTCGAGAA GCGAACGGGCAG-CTTG ATC CAGGGCTGCCCTTTTGC TTTTTGTGACGTGCG Acid345_0634 779302 - 779790 + | AsnC family transcriptional regulator Acid345_0635 779936 - 780268 + | DsrC-like protein TERM 602 780733 - 780713 - g 87 -9.7 -4.66537 | overlap 780714 CGCCCGAATACAAAA GCCGTGGTT GTG AACCACGGG TCGAACGTTATCGGC TERM 603 780732 - 780714 - g 79 -13.2 -3.3944 | overlap 780713 GCCCGAATACAAAAG CCGTGGTT GTG AACCACGG GTCGAACGTTATCGG Acid345_0636 780278 - 781474 + | cysteine desulphurase-like protein Acid345_0637 781554 - 782828 + | beta-lactamase TERM 604 783228 - 783206 - f 80 -4.2 -5.00616 | overlap 783188 783213 783217 GTTTTGGCCAAAAAA GACAAAACAA AGA CCGTTTTATC GTAAACGGTCATGAA TERM 605 783241 - 783213 - f 74 -2.5 -5.06052 | gap 1, opp_overlap 783237, overlap 783188 783206 783217 CCAAAAAAGACAAAA CAAAGACCGTTT TATCGT AAACGGTCAT-G AAAATGATTGACTCA TERM 606 783238 - 783217 - f 100 -8.8 -4.93812 | opp_overlap 783237, overlap 783206 783213 AAAAGACAAAACAAA GACCGTTT TATCGT AAACGGTC ATGAAAATGATTGAC TERM 607 786518 - 786537 + G 74 -7.2 -4.36914 | gap 1, opp_overlap 786487, overlap 786513 AACCAACCGGCAGAT CCAGCTCTC GCT GA-AGCTGG TTTTCTAGCGGAACG Acid345_0638 783336 - 786545 + | hypothetical protein TERM 608 786568 - 786597 + F 87 -8.5 -4.6526 | opp_overlap 786555, overlap 786569 786570 CAGCGACCTCCCTAC CAGGCGGCAGCAA GAGA TTGTTGCCGCCCA TTTTTAAGAGTTTCT TERM 609 786569 - 786596 + F 80 -12 -3.38071 | opp_overlap 786555, overlap 786568 786570 AGCGACCTCCCTACC AGGCGGCAGCAA GAGA TTGTTGCCGCCC ATTTTTAAGAGTTTC TERM 610 786570 - 786595 + F 85 -15.5 -2.6212 | opp_overlap 786555, overlap 786569 786568 GCGACCTCCCTACCA GGCGGCAGCAA GAGA TTGTTGCCGCC CATTTTTAAGAGTTT TERM 611 786968 - 786981 + G 83 -9.5 -4.26189 | opp_overlap 786956 AACTGCACGCGATCT CGGGG ACGA CCCCG TTTTCGCGTTTATGA Acid345_0639 786696 - 788450 + | mannose-6-phosphate isomerase-like protein Acid345_0640 788477 - 789388 + | Alpha/beta hydrolase Acid345_0641 790546 - 789389 - | hypothetical protein TERM 612 790458 - 790437 - G 72 -6.5 -4.39166 | CCGCAGAGACGAAAA TCTGCGATG TGTC CACCGCCGA GGAGCACTGTGATTT Acid345_0642 791306 - 790548 - | short-chain dehydrogenase/reductase SDR Acid345_0643 792118 - 791303 - | short-chain dehydrogenase/reductase SDR Acid345_0644 795635 - 792129 - | glycosyl hydrolases 38-like TERM 613 795294 - 795284 - G 74 -6.8 -4.32046 | overlap 795286 GTTTCAAAAACGAAA GACG CGG CGTC TCGTACAACATCGCG Acid345_0645 796822 - 795629 - | mandelate racemase/muconate lactonizing enzyme TERM 614 796298 - 796310 + g 90 -6.2 -5.19879 | overlap 796296 AATCTCTTCATCTGG CGGC AGAAC GCCG TTTTTGTATTTGAGC Acid345_0646 797679 - 796837 - | gluconolactonase TERM 615 797331 - 797296 - G 81 -3.2 -5.19251 | gap 1, overlap 797298 CAACACGAACAAAAA TCCATCGTCGCCG-TGA AAC TCACCGGAGTCGCTGAA ATAAAGATTGCCTTC Acid345_0647 797794 - 798666 + | 5-carboxymethyl-2-hydroxymuconate delta-isomerase Acid345_0648 798689 - 799798 + | hypothetical protein TERM 616 799813 - 799846 + T 81 -12.5 -3.06796 | opp_overlap 799803 799813, overlap 799815 GTCAACGTTCAAGAA CACGTTTGCAGAATG CGAG CGTGCTGCGAACGTG TTCGGTCCAATACGG Acid345_0649 800605 - 799799 - | putative esterase Acid345_0650 803104 - 800618 - | Alpha-glucosidase TERM 617 801467 - 801452 - G 75 -9 -4.03413 | ATGTGTCCAGACAAA CGGAGT CAGT ACTCCG GTCTGCATCCACCGC Acid345_0651 804076 - 803132 - | sugar kinase TERM 618 803689 - 803735 + g 70 -12.1 -2.8474 | gap 1, opp_overlap 803679, overlap 803695 CGACATTGTCGTAGC CGTGCGCGGCGCCC-GCGTGGC GTTC GCCGAGCAGGGCCATGCGCGCG TCGTTCTCAATCGCG TERM 619 803695 - 803738 + g 83 -13.8 -3.35679 | gap 1, opp_overlap 803679, overlap 803689 TGTCGTAGCCGTGCG CGGCGCCCGCGTGGCGTTCGC CGA GC-AGGGCCATGCGCGCGTCG TTCTCAATCGCGAAG TERM 620 804136 - 804122 - H 81 -8.6 -4.25401 | opp_overlap 804122 CAAACGCAATAGAAA CAGGAT AAT ATCCTG TTATAGCTATAAACG TERM 621 804151 - 804166 + H 74 -3.3 -4.95957 | opp_overlap 804151 GTTATAGCTATAAAC GAACA CAATTT TGTTC TTTTTGGTTGATTTA Acid345_0652 804260 - 804772 + | glucose-6-phosphate isomerase Acid345_0653 804789 - 805565 + | glucose-6-phosphate isomerase Acid345_0654 806898 - 805567 - | major facilitator superfamily sugar transporter TERM 622 806387 - 806364 - G 79 -5.9 -4.74215 | overlap 806367 806368 ACATTACGAAGAAAA GAACCGCCG GCGCCG CGGCGATAC CCAACATCCATCGCC TERM 623 806381 - 806367 - G 76 -7 -4.46587 | overlap 806364 806368 TTACGAAGAAAAGAA CCGCCG GCG CCGCGG CGATACCCAACATCC TERM 624 807567 - 807554 - g 77 -2.3 -5.06451 | overlap 807555 807556 GATCACGGTAAAAAA CGCCA GCAG TGGCC GCAGAACGTTCACGC Acid345_0655 807027 - 809276 + | hypothetical protein Acid345_0656 810137 - 809283 - | DeoR family transcriptional regulator TERM 625 809789 - 809807 + g 78 -9.5 -4.03078 | opp_overlap 809781 TGATTAATGCGGCCG CGGCGCG CCCGA TGCGCCG TTTCTCATCTGCTGC Acid345_0657 810986 - 810246 - | cyclic nucleotide-binding protein TERM 626 811068 - 811057 - H 71 -4.4 -4.66833 | CTTCAACCGCAAAAA GCTT CGTA AAGC ATTACAGAACCGAAA TERM 627 811512 - 811544 + H 71 -4.8 -4.62069 | opp_overlap 811517, overlap 811518 TGGGCCAAGCTTTGA TTTAAGCGGCATCC TCCCC GGATGCCGTTTGCC TTTTTGACGTAAGCC TERM 628 811518 - 811538 + H 93 -12.6 -3.99805 | opp_overlap 811517, overlap 811512 AAGCTTTGATTTAAG CGGCATCC TCCCC GGATGCCG TTTGCCTTTTTGACG TERM 629 812538 - 812554 + G 86 -4.4 -5.26316 | gap 1 AGCTTGGACGCGAAC CTCGACG CGCC CG-CGAG TTTTTTCTGAAGTAC Acid345_0658 811658 - 812800 + | amidohydrolase 2 TERM 630 812976 - 813011 + G 76 -13.2 -3.07307 | overlap 812965 ATGCAGATCCTCCAG ATCGTGCGCGAGCGCG GCCG CGTGCGCGTGCACGAA TTGAGTGAACGTTTC Acid345_0659 812835 - 813701 + | DeoR family transcriptional regulator Acid345_0660 814625 - 813714 - | ribokinase family sugar kinase TERM 631 814038 - 814056 + g 71 -10.2 -3.53224 | GTTCGTCTGAGCGAT CCGGCATG CCT CCTGCCGG TTTGGCAGGAAAATA TERM 632 814855 - 814833 - g 71 -7.6 -4.08692 | opp_overlap 814831 814826 CAAGCTGGCGGAAAA GCTGCGCATG TCG CATTCGCGGC GGTTTCGTTGGGTGC Acid345_0661 814704 - 815648 + | 1-phosphofructokinase Acid345_0662 815839 - 817341 + | parallel beta-helix repeat-containing protein TERM 633 817399 - 817355 - f 80 -9.9 -3.98172 | gap 2, overlap 817356 817359 817389 AGCAATACGGATAAA GTCAGCCCCGCCGAGTGCGCG TCAGT CGCGAACATGGCGGGGC-G-C AAGATTGGGGTAGAG TERM 634 817400 - 817356 - f 71 -11.2 -2.9818 | overlap 817355 817359 817389 GCAATACGGATAAAG TCAGCCCCGCCGAGTGCGCG TCAGT CGCGAACATGGCGGGGCGCA AGATTGGGGTAGAGG TERM 635 817397 - 817359 - f 91 -17.3 -2.71593 | overlap 817355 817356 817389 ATACGGATAAAGTCA GCCCCGCCGAGTGCGCG TCAGT CGCGAACATGGCGGGGC GCAAGATTGGGGTAG TERM 636 818290 - 818313 + G 71 -8.1 -3.94877 | GGCGTCATGCTCGGC GGTCCGATC ATCAAG GACCGGACC TTCTTCTTCGCCGAT TERM 637 820529 - 820565 + G 71 -10.7 -3.62046 | opp_overlap 820527 820528 820560 820561 CAGTGACCAGCAACG CCGGCGTCTCCAATGCC GAT GGCGGCGGAAACGTCGG TTCTTCCGACCGTCC TERM 638 820774 - 820737 - g 71 -11.3 -3.28712 | TTTCTCGCTCTATAA GGATTTCGCAGTGACCG AACG CAGCCACTTCGAATTCC GCGCCGAGATGTTCA Acid345_0663 817417 - 820947 + | TonB-dependent receptor TERM 639 820979 - 821016 + G 100 -14.1 -4.08394 | opp_overlap 821000, overlap 820980 TACCTCCATGCACCG ATGCCTTCCGTTGCGGG GAAA TCCGCGACGGAAGGCCC TTTTCACCGCGCTCT TERM 640 820980 - 821015 + G 91 -17.6 -3.04715 | opp_overlap 821000, overlap 820979 ACCTCCATGCACCGA TGCCTTCCGTTGCGGG GAAA TCCGCGACGGAAGGCC CTTTTCACCGCGCTC TERM 641 822055 - 822037 - g 74 -7.4 -4.36914 | overlap 822021 822022 822039 CGCTGGTGGATAAAA TCCACGCC GCC GGCATGAA GGCGCAGTTATGGTG Acid345_0664 820956 - 823010 + | glycoside hydrolase, clan GH-D Acid345_0665 823007 - 824209 + | sugar isomerase (SIS) TERM 642 824298 - 824247 - f 76 -9.6 -3.81027 | gap 1, opp_overlap 824253, overlap 824241 TTCAAGTAACGTAAA TCTTCCTTA-CGGCGGTAATTGG TTCTTCC CCAATTCCTGCCGATGAGGAAGA CATGCACGCGACAGA TERM 643 825788 - 825772 - g 71 -8 -4.08394 | ATATTTCGCTGAAAA TCCGGA GAAGG TCCGGA GTGATAGCGAACGGA Acid345_0666 824300 - 826795 + | multi-sensor hybrid histidine kinase Acid345_0667 828402 - 826792 - | AMP-dependent synthetase and ligase TERM 644 827193 - 827213 + g 76 -13.3 -2.75844 | opp_overlap 827181 827193, overlap 827192 AACCGTCGCGCAACA CGGATGCTG TCG CAGCGTCCG CTTTCCAATAGCCCC TERM 645 828450 - 828413 - R 100 -14.9 -4.76041 | TACACCGACGAAAAA TCCCATCCCGTGCGC CAACTCAC GCGCTCAGGATGGGA CCGATTGAAATTCGT Acid345_0668 829844 - 828465 - | cystathionine gamma-lyase Acid345_0669 830451 - 829849 - | isochorismatase hydrolase Acid345_0670 830559 - 830915 + | hypothetical protein TERM 646 831092 - 831106 + G 81 -4.2 -5.07567 | ATCGGGCGGCTATGC CGGG ATTGTGC CCCG TTTTTTCAACTATGG Acid345_0671 830928 - 831404 + | hypothetical protein Acid345_0672 832233 - 831385 - | putative RNA methylase Acid345_0673 832703 - 832308 - | hypothetical protein Acid345_0674 832766 - 833029 + | hypothetical protein Acid345_0675 833350 - 833093 - | hypothetical protein Acid345_0676 833571 - 834260 + | TonB-like protein Acid345_0677 834586 - 834957 + | hypothetical protein TERM 647 834993 - 835018 + F 100 -10.4 -5.54907 | opp_overlap 834991, overlap 834994 CTCCGCTAGACTAGG CGCGGCGAAG CGGTAA CTTCGCCGCC TTTTTCTTTTCTGCC TERM 648 834994 - 835017 + F 93 -13.9 -3.91317 | opp_overlap 834991, overlap 834993 TCCGCTAGACTAGGC GCGGCGAAG CGGTAA CTTCGCCGC CTTTTTCTTTTCTGC Acid345_0678 835119 - 836384 + | amino acid transporter Acid345_0679 836381 - 837130 + | putative lipase/esterase Acid345_0680 838401 - 837127 - | kynureninase Acid345_0681 839762 - 838401 - | monooxygenase, FAD-binding Acid345_0682 841655 - 839766 - | tryptophan 2,3-dioxygenase Acid345_0683 842188 - 841658 - | 3-hydroxyanthranilate 3,4-dioxygenase Acid345_0684 842614 - 842198 - | endoribonuclease L-PSP Acid345_0685 844074 - 842617 - | betaine-aldehyde dehydrogenase TERM 649 843317 - 843294 - G 75 -3.9 -4.76041 | gap 2, overlap 843283 843295 843297 843298 CACAGTCAGCAAAAA TGACGGCGGCA TTCT TGCCGCC--CA ACTCAAACGAAACCG TERM 650 843315 - 843298 - G 71 -12.7 -2.56601 | overlap 843283 843297 843294 843295 GTCAGCAAAAATGAC GGCGGCA TTCT TGCCGCC CAACTCAAACGAAAC Acid345_0686 844877 - 844179 - | phospholipase/carboxylesterase TERM 651 844284 - 844258 - G 71 -10.8 -3.57106 | overlap 844254 GCGAAGGCAAAGTAA TCGTGGTCTGCC TTC GGCAGCTCACGA TAATGCAGCGTGTAC TERM 652 844702 - 844669 - G 77 -11.7 -3.53012 | gap 1, overlap 844693 TTCTTTTTTGCGAAA GCTGCCCACGCTTCGA TCA TCGAATCG-GGGCTGC CCCCAGCGCCGTGCA Acid345_0687 844985 - 846493 + | hypothetical protein TERM 653 847485 - 847455 - g 70 -2.5 -4.77757 | gap 1, overlap 847458 GCTGAAAAATGAAAA GACCGTTGCCCTCG TTTG CGGCGGCAAC-ATC GACGTCTCGTTGCTG Acid345_0688 846535 - 847776 + | L-threonine ammonia-lyase TERM 654 847997 - 847987 - g 71 -6.8 -4.10453 | opp_overlap 847987 847987, overlap 847976 GAAAGTCTCTGAAAA GGTC AGC GACC TGATCTTCTCGCCCG Acid345_0689 847883 - 849058 + | twitching motility protein Acid345_0690 849099 - 849533 + | hypothetical protein Acid345_0691 849651 - 852590 + | hypothetical protein Acid345_0692 852741 - 854603 + | PAS/PAC sensor signal transduction histidine kinase TERM 655 855222 - 855201 - g 76 -12.3 -3.38966 | opp_overlap 855201 855200, overlap 855191 AAAACTGATGTACAA CTCGCCCCA CGCG TGGGACGAG CTTCTCGGCAAACTT Acid345_0693 854692 - 855747 + | uroporphyrinogen decarboxylase Acid345_0694 855744 - 856655 + | ferrochelatase TERM 656 857318 - 857291 - g 70 -3.9 -4.57518 | AATAAAAAAATGAAA GCGGCGATGGC AGGCAA GCCCAAGCCGC CCCTTTTCACCTCTC Acid345_0695 856658 - 858133 + | protoporphyrinogen oxidase Acid345_0696 858208 - 858792 + | TetR family transcriptional regulator Acid345_0697 858864 - 859274 + | hypothetical protein TERM 657 859615 - 859627 + G 78 -3.3 -5.1615 | overlap 859616 GCGCTCCTCACGTTC CGCGT TCG ACGCC TTTTTTGGGTGTTCG Acid345_0698 859342 - 859866 + | hypothetical protein TERM 658 860439 - 860425 - f 71 -7.8 -3.93038 | opp_overlap 860431, overlap 860426 TACCCGAATAGGAAA CCGCAC TTC GTGCGA AACGGAATTGCTGGC Acid345_0699 860447 - 861007 + | hypothetical protein TERM 659 861676 - 861656 - g 73 -3.1 -4.7254 | ATTTCCGACGAAAAA GCCTGCACC GCC GCCGGAGGC ACCTTCCGCGATCAC Acid345_0700 861071 - 861781 + | hypothetical protein Acid345_0701 863538 - 862009 - | hypothetical protein TERM 660 862628 - 862652 + g 75 -4.1 -4.77775 | overlap 862629 TTCGTCCCGCCATCT CGTGCGGCCGT GAT GTGGTCGCGCA TTTCTTTTGTCCAGT TERM 661 863410 - 863376 - G 71 -7.8 -4.07568 | gap 1, opp_overlap 863376, overlap 863377 GGTTCTCTTCGAAAA CCGTAGGAGGCGGTG TTCCGC CGCCGCCTCC-ACCG CCACCGTTTCCGCCG Acid345_0702 864429 - 863674 - | DNA-3-methyladenine glycosylase II Acid345_0703 865040 - 864426 - | regulatory protein RecX TERM 662 865108 - 865050 - R 71 -9.8 -3.50737 | gap 2, opp_overlap 865051 865051 865107, overlap 865051 865064 ATCCATAAACACGAA GGGCACGAAGGAAACGAAGGTTTCACTG CAACT CAG-AAATCCTTCGTGTACTTCGTGCC- CTTCGTGTTGAAAGG TERM 663 865051 - 865108 + r 78 -13.6 -2.6155 | gap 1, opp_overlap 865050 865051 865064, overlap 865051 865107 TCCATAAACACGAAG GGCACGAAGGAAACGAAGGTTTCACTG CAACT CAGA-AATCCTTCGTGTACTTCGTGCC CTTCGTGTTGAAAGG TERM 664 865108 - 865051 - R 85 -15.8 -2.69719 | gap 1, opp_overlap 865051 865051 865107, overlap 865050 865064 TCCATAAACACGAAG GGCACGAAGGAAACGAAGGTTTCACTG CAACT CAG-AAATCCTTCGTGTACTTCGTGCC CTTCGTGTTGAAAGG TERM 665 865107 - 865123 + r 70 -2.9 -4.74012 | opp_overlap 865050 865051, overlap 865051 865051 TTCGTGTACTTCGTG CCCTTCG TGT TGAAAGG TTTTGCTTTTATCGT Acid345_0704 866283 - 865132 - | twitching motility protein TERM 666 865333 - 865382 + g 75 -10.7 -3.63744 | gap 1, overlap 865332 CTGGTCGAAGGTCTG CATGCCGTA-CTGCGAAGTGCCGG CCG CCAGTGCTTCGCGGATGCTGCGTG TCTTTTCCGGAACGA Acid345_0705 867480 - 866476 - | hypothetical protein TERM 667 866631 - 866650 + g 74 -7.2 -4.38092 | gap 1 TTTCTGCTGCGATCT GGTCGAAGG CTT CCTTC-ACC TTCTTTTCGTTGTTG TERM 668 866952 - 866928 - G 71 -12.1 -2.87683 | overlap 866931 AGATCGCGTCATACA GCACCGTGCCG CCT CGGCACGATGA CGGCAACGGCCCGCC Acid345_0706 867578 - 868912 + | hypothetical protein TERM 669 868889 - 868919 + T 71 -6.1 -4.34486 | gap 1, opp_overlap 868898, overlap 868888 CAGCAACCACCACCC GCGC-AGCAATCGC CAAC GCAATAGCTCGCGC TTATTTCTTCTTGGT Acid345_0707 869480 - 868920 - | hypothetical protein Acid345_0708 869837 - 870421 + | MglA protein TERM 670 870478 - 870461 - T 70 -9.9 -3.32963 | opp_overlap 870443 ATCCTGAGCGGAGAA TCCGGAT AACG ATCCGGA TTCGCAGTCGAAGGA Acid345_0709 872913 - 870793 - | glycoside hydrolase 15-related TERM 671 873216 - 873237 + r 88 -11.5 -4.11216 | opp_overlap 873217, overlap 873217 GTCAGTAAATAGCAA ACGGGACGC CGAA GCGTCCCGC TTTTGCCGCTGGGGG TERM 672 873236 - 873217 - R 100 -15 -4.02719 | opp_overlap 873216 873217 TCAGTAAATAGCAAA CGGGACGC CGAA GCGTCCCG CTTTTGCCGCTGGGG TERM 673 873217 - 873236 + r 91 -15 -3.06515 | opp_overlap 873217, overlap 873216 TCAGTAAATAGCAAA CGGGACGC CGAA GCGTCCCG CTTTTGCCGCTGGGG Acid345_0710 874430 - 873258 - | ATPase AAA-2 TERM 674 874706 - 874720 + H 100 -10 -5.21709 | TTTGGCGTCTGGTTC TCGCTC GAT GAGCGA TTTTTTCCTCTGCCA Acid345_0711 874808 - 875416 + | signal transduction histidine kinase, nitrogen specific, NtrB Acid345_0712 875623 - 876561 + | branched chain amino acid aminotransferase / branched chain amino acid: 2-keto-4-methylthiobutyrate aminotransferase TERM 675 876580 - 876599 + F 100 -13.6 -4.30719 | opp_overlap 876580 TTCTGGTAGTGAGAA GAGGCGCT TGCG AGCGCCTC TTTGTTCTCGAAAAC TERM 676 876599 - 876580 - f 88 -13.6 -3.35679 | opp_overlap 876580 TTCTGGTAGTGAGAA GAGGCGCT TGCG AGCGCCTC TTTGTTCTCGAAAAC Acid345_0713 876601 - 877350 + | translation initiation factor 3 Acid345_0714 877483 - 877722 + | 50S ribosomal protein L35P TERM 677 877747 - 877723 - f 84 -13.7 -3.1505 | ATGATCCCTTACTAA CTTCAACGCCA AAG TAGCGTTGAAG GCCCGAAACAGAAGT TERM 678 878063 - 878025 - g 77 -10.3 -3.8917 | gap 1 CCGCAAGCAGAAGAA GCGCCAGTATCGCTCGAT CTGG ATCGTGCG-TATCGGCGC CGCGGCGAAGTTGAA rplT 877864 - 878229 + | 50S ribosomal protein L20 TERM 679 878265 - 878287 + F 100 -17 -4.48987 | CCCAATTTTTACAGG TGGGCGGCCG ATT TGGCCGCCCA TTTTGCTTCTGAGAA TERM 680 878615 - 878647 + G 82 -14.1 -2.98823 | overlap 878583 878584 878617 TGAACTCGCAGGCGT CGTCGGCGCGCTTGG TCT CCGAGCGCGTGGATG TGTCTCTGCCGGGCA TERM 681 878617 - 878645 + G 76 -13.1 -3.05022 | overlap 878583 878584 878615 AACTCGCAGGCGTCG TCGGCGCGCTTGG TCT CCGAGCGCGTGGA TGTGTCTCTGCCGGG Acid345_0716 878311 - 879420 + | phenylalanyl-tRNA synthetase, alpha subunit Acid345_0717 879785 - 879417 - | hypothetical protein Acid345_0718 879874 - 881889 + | phenylalanyl-tRNA synthetase beta subunit Acid345_0719 882130 - 882426 + | hypothetical protein Acid345_0720 882521 - 882880 + | hypothetical protein TERM 682 882880 - 882907 + F 74 -7.6 -4.11304 | opp_overlap 882882, overlap 882881 GCGCATGGTTGGGTA AAGCCTCGTTCC TCCC GGGACGAGGCCG TTCTTTGTAAGTTCC TERM 683 882881 - 882906 + F 72 -11.1 -3.06059 | opp_overlap 882882, overlap 882880 CGCATGGTTGGGTAA AGCCTCGTTCC TCCC GGGACGAGGCC GTTCTTTGTAAGTTC TERM 684 882905 - 882882 - f 81 -12.4 -3.53444 | opp_overlap 882881 882880 GCATGGTTGGGTAAA GCCTCGTTCC TCCC GGGACGAGGC CGTTCTTTGTAAGTT Acid345_0721 883095 - 884327 + | ABC efflux pump, inner membrane subunit Acid345_0722 884328 - 885590 + | ABC efflux pump, inner membrane subunit TERM 685 885683 - 885703 + G 72 -9 -3.90318 | overlap 885695 TGGTGCGGTCAGCGG CACAGCGT ATTAC GCGCTGTG TTTATGGGGTGCTGC Acid345_0723 885627 - 886784 + | ceramide glucosyltransferase, putative Acid345_0724 888041 - 886788 - | ceramide glucosyltransferase, putative Acid345_0725 889981 - 888152 - | glycosyl transferase family protein TERM 686 888704 - 888731 + g 76 -4.8 -4.72272 | overlap 888705 CAGATCAAGGACGTG ACCGAGCGAC ATGGCGTA GTCGTTCGGA TTTTTCCTCAAAAGA Acid345_0726 891419 - 890319 - | short-chain dehydrogenase/reductase SDR Acid345_0727 892205 - 891435 - | formate/nitrate transporter Acid345_0728 892415 - 893362 + | hypothetical protein TERM 687 893387 - 893414 + T 100 -15.6 -4.15044 | opp_overlap 893387 893391 GTAACCTACCCAACA CAAAGGCGACCC TTGC GGGTCGCCTCTG TTTGTTGCGGGGAGG TERM 688 893414 - 893387 - T 100 -17.8 -3.1085 | opp_overlap 893387, overlap 893391 GTAACCTACCCAACA CAAAGGCGACCC TTGC GGGTCGCCTCTG TTTGTTGCGGGGAGG TERM 689 893410 - 893391 - T 100 -15 -4.21607 | opp_overlap 893387, overlap 893387 CCTACCCAACACAAA GGCGACCC TTGC GGGTCGCC TCTGTTTGTTGCGGG Acid345_0729 894443 - 893439 - | dihydroorotate dehydrogenase 2 TERM 690 894335 - 894305 - G 74 -12.6 -3.01712 | opp_overlap 894303 894298 894333 TTTGCTCTTCGAAGA GCGAGTGCAGCA CGATGGC TGCCGCACCCGC ATCTTCCATGCGTTT Acid345_0730 898062 - 894436 - | pyruvate--ferredoxin (flavodoxin) oxidoreductase TERM 691 898427 - 898407 - R 100 -14 -5.09259 | GATCGCAAAAGAAAA GGCGCAGC ACGTG GCTGCGCC TGGAAGTCACGAACG Acid345_0731 899840 - 898443 - | phospholipase C TERM 692 900034 - 900013 - R 100 -15.1 -5.35224 | opp_overlap 900012 TCCAGAAAAAGAAAA GCCCGCAGC CGAA GCCGCGGGC GTGAGTTGCTGAAAT Acid345_0732 900758 - 900051 - | TPR repeat-containing protein Acid345_0733 901145 - 900894 - | hypothetical protein Acid345_0734 902827 - 901142 - | AMP-dependent synthetase and ligase Acid345_0735 902938 - 904353 + | membrane bound O-acyl transferase, MBOAT Acid345_0736 906008 - 904350 - | TPR repeat-containing protein TERM 693 906846 - 906825 - g 72 -5.1 -4.58283 | gap 1, overlap 906828 CAAGCTGCGCAAAAA GAACG-ACCC GAA GGGTGCGGTC GAACTCTGGAAGCAA Acid345_0737 906271 - 906960 + | TPR repeat-containing protein TERM 694 906974 - 907028 + T 95 -14.4 -3.51232 | overlap 906979 906980 AAGACTCACCGTCTA CTTATCGCGCGCGTTGCTC-GTGGAC ACTTG GTCCGCAGGGCAACGCGCGC-ATTCG TTGGTTTGCGACCAA TERM 695 906979 - 907024 + T 100 -19.8 -3.5013 | gap 1, overlap 906974 906980 TCACCGTCTACTTAT CGCGCGCGTTGCTC-GTGGAC ACTTG GTCCGCAGGGCAACGCGCGCA TTCGTTGGTTTGCGA TERM 696 906980 - 907023 + T 100 -23.3 -2.69596 | gap 1, overlap 906979 906974 CACCGTCTACTTATC GCGCGCGTTGCTC-GTGGAC ACTTG GTCCGCAGGGCAACGCGCGC ATTCGTTGGTTTGCG Acid345_0738 909065 - 906975 - | hypothetical protein Acid345_0739 909238 - 910734 + | hypothetical protein Acid345_0740 912189 - 910735 - | hypothetical protein Acid345_0741 914130 - 912193 - | hypothetical protein Acid345_0742 915194 - 914127 - | NHL repeat-containing protein Acid345_0743 917062 - 915212 - | hypothetical protein TERM 697 915941 - 915926 - G 72 -5.4 -4.54727 | opp_overlap 915934 CGCGCCAAACGAAAA GTTCAG AGCG CCGAAC AAAGGTCGAGCGTAG Acid345_0744 918106 - 917075 - | hypothetical protein TERM 698 917973 - 918010 + g 95 -13.3 -4.07687 | TTGGTTTCGTCCACA GGGCGCGCGGCGGGAAC GGAC GTAGTCGCCGTGCGCTC TTTTGCGACCGCGGT TERM 699 918131 - 918158 + r 71 -11.2 -2.88366 | opp_overlap 918132, overlap 918130 AACTCATGCAGGAAA ATCGGGGGAGGG TAAC CCCTCCCCCCAG GTTGTTGGTTAGAAC TERM 700 918157 - 918132 - R 100 -14.7 -4.28548 | opp_overlap 918131 918130 ACTCATGCAGGAAAA TCGGGGGAGGG TAAC CCCTCCCCCCA GGTTGTTGGTTAGAA Acid345_0745 919180 - 918167 - | hypothetical protein TERM 701 918347 - 918365 + g 77 -12.4 -3.54935 | GTACCCATTCTTCTG GATCGCCG TGC CGGCGGTC TTTCCCGCGCCTTTG Acid345_0746 920579 - 919323 - | NHL repeat-containing protein Acid345_0747 922062 - 920599 - | multiheme cytochrome TERM 702 923520 - 923508 - g 78 -4.1 -4.91852 | TCCAGGAAAAAGAAA TCGTC GTC AACGA TCCGCTGGTCTATGA TERM 703 924136 - 924113 - g 86 -14.6 -3.25729 | GAGAAGTACTACGAA CTCGTGGCGA AGAT CCGCCACGAG CTGGGGATCAAGGAA Acid345_0748 922742 - 924196 + | ResB-like protein TERM 704 924640 - 924628 - g 75 -5.5 -4.65263 | ATCGCCGAAAAGAAA TACGG CGT CCGCA TCGTCGGTTCAATCA Acid345_0749 924220 - 925638 + | cytochrome c assembly protein TERM 705 925644 - 925674 + F 100 -14.1 -3.81137 | gap 1, overlap 925644 925647 GTACGCATGAGGACC G-GATGGGAGCGGG GCAA CTCGCTCCCATCGC TTTGGATGTTTGGGC TERM 706 925644 - 925673 + F 86 -14.3 -2.882 | overlap 925644 925647 GTACGCATGAGGACC GGATGGGAGCGGG GCAA CTCGCTCCCATCG CTTTGGATGTTTGGG TERM 707 925647 - 925670 + F 81 -14.6 -2.6836 | overlap 925644 925644 CGCATGAGGACCGGA TGGGAGCGGG GCAA CTCGCTCCCA TCGCTTTGGATGTTT TERM 708 925698 - 925717 + F 89 -13.6 -3.55444 | opp_overlap 925697 TTTGGGCTGAACCAG GGCACGAC GAAC GTCGTGCC TTTCCACCATAGAAA Acid345_0750 925739 - 926911 + | periplasmic sensor signal transduction histidine kinase TERM 709 927161 - 927148 - g 80 -4.5 -4.94962 | gap 1 ACAACTGAAAGAAAA CG-GCG ATG CGCGCG CGGTCATTATGATCA TERM 710 928046 - 928033 - g 79 -5.2 -4.74103 | GCGTGAACTGAAAAA CGCG ATCGAG CGCG CCATGATCCTGGATG Acid345_0751 926933 - 928390 + | two component, sigma54 specific, Fis family transcriptional regulator TERM 711 928419 - 928393 - T 73 -8.7 -3.78329 | gap 1, overlap 928387 CGCCACCAACTGAAA GATCAGGCC-GC AGTC GCTGGCCCGACC ACATACCGCAAAATC Acid345_0752 929057 - 928395 - | hemolysin III family channel protein TERM 712 929165 - 929183 + r 81 -12.4 -3.61398 | opp_overlap 929152 ATCGGCGTACCGGAT GATGCGCC TGT GGCGCGTC TTATTAGACCACCCC Acid345_0753 930848 - 929268 - | Alpha-L-arabinofuranosidase Acid345_0754 933599 - 930963 - | ABC efflux pump, inner membrane subunit Acid345_0755 933973 - 933596 - | PadR family transcriptional regulator Acid345_0756 934382 - 934789 + | hypothetical protein TERM 713 934840 - 934808 - T 100 -16.2 -4.54727 | GGGGGGAAACGAAAA CCGGGACCGTGCTC TGCGC GGGCGCGGTCCCGG GGAGCGCGAAGCATT Acid345_0757 935557 - 934889 - | TPR repeat-containing protein TERM 714 935572 - 935585 + r 71 -8.1 -3.82353 | overlap 935571 TGAATCTTCTACTCG GAGGC TGTA GCCTC TCTTGTTTTTACCTC Acid345_0758 936916 - 935621 - | glutamyl-tRNA reductase TERM 715 936530 - 936545 + g 75 -10.4 -3.75766 | GGTTCCGGCGGCCTG CGCCTG CGAC CAGGCG TTCTTGAATTGTCCG Acid345_0759 937206 - 937508 + | cytochrome c, class I TERM 716 937529 - 937546 + F 100 -14.1 -4.67038 | CTCCGTTGTGGATTT GGGCGGC TGAG GCCGCCC TTTTCGTTTTGAGGG TERM 717 937580 - 937570 - f 77 -8.2 -4.09117 | opp_overlap 937573, overlap 937571 TTGAGGGACAAAGAA GCCC GAA GGGC GGATGAGCTTCTCAG TERM 718 937830 - 937801 - g 70 -4.2 -4.59511 | opp_overlap 937802, overlap 937802 937827 AAGATGGGGCAAAAA CTCGGTGCTGCC GATTTG AGCAGCAACGAC ATCCAAGGTTTGAGT Acid345_0760 937660 - 937965 + | cytochrome c, class I TERM 719 938211 - 938185 - g 75 -10 -3.66921 | opp_overlap 938203, overlap 938160 AACCTCAACGGCAAA GCGCGCACCGCG GAA CTCGACACGCGC GTGACTCTGCTCGAC Acid345_0761 938002 - 938619 + | 2Fe-2S protein TERM 720 939582 - 939572 - g 77 -8.2 -4.34263 | TGCCAAGAACACAAA CGGC AAA GCCG TGAAGATCATGCTGG TERM 721 939722 - 939749 + G 76 -12.6 -3.11786 | overlap 939712 939710 GGGCACGGGCGGTCC CGGCGGTGGAGG ATCG CCGCCGCTGCCG TATGTCTTCGATATC Acid345_0762 938622 - 940973 + | xanthine dehydrogenase, molybdenum binding subunit apoprotein TERM 722 941320 - 941338 + G 70 -12.4 -2.71011 | TGGCGGGAACATCTG CCAGCGGC CGC GCTGCTGG TACTTCCGCAACGGT Acid345_0763 940976 - 941995 + | molybdopterin dehydrogenase, FAD-binding TERM 723 942240 - 942296 + T 100 -21 -3.38056 | gap 2, opp_overlap 942240, overlap 942240 ACAAGAATCGTAAAA GGTGCGGG-TGATCTGGTC-TCGGCGGG AAT CCCGAGGTTGACCAGATCAGCCCGCACC TGATTTTTTACGGCT TERM 724 942296 - 942240 - T 100 -21 -4.24726 | gap 2, opp_overlap 942240 942240 ACAAGAATCGTAAAA GGTGCGGG-TGATCTGGTC-TCGGCGGG AAT CCCGAGGTTGACCAGATCAGCCCGCACC TGATTTTTTACGGCT Acid345_0764 944613 - 942304 - | hypothetical protein Acid345_0765 944783 - 945496 + | hypothetical protein TERM 725 945533 - 945550 + F 75 -11.3 -3.32963 | overlap 945527 CCCTTCGACTTCGAA CGCGGAA TTTT TTCCGCG TTCTCCGCTCAGGAT TERM 726 945581 - 945604 + F 90 -8.1 -4.74012 | overlap 945577 GACAAGAGATTGTGA GCCGCGC ACTTGTCTCC GCGCGGC TTTTGGTTTTATGGT Acid345_0766 945627 - 946250 + | hypothetical protein TERM 727 946265 - 946301 + F 71 -8.1 -3.85698 | gap 1, overlap 946267 ATTTCGGCACATTCC TCTGCAGCGCT-GTGA ATTACC TCGCCAGCGCTGCATA TTTCTGCAACAGCGA TERM 728 946267 - 946299 + F 74 -10.7 -3.51934 | gap 1, overlap 946265 TTCGGCACATTCCTC TGCAGCGCT-GTGA ATTACC TCGCCAGCGCTGCA TATTTCTGCAACAGC Acid345_0767 946602 - 947273 + | glycine cleavage H-protein TERM 729 947325 - 947348 + F 95 -18.2 -2.75349 | overlap 947321 947328 ATCGGCTCTCCGCCC GAAGCCCCGC GCAA GCGGGGCTTC TAAATTTTGCCGATT TERM 730 947328 - 947345 + F 95 -14.1 -3.52113 | overlap 947325 947321 GGCTCTCCGCCCGAA GCCCCGC GCAA GCGGGGC TTCTAAATTTTGCCG TERM 731 948733 - 948702 - g 71 -8 -4.07568 | gap 1, overlap 948684 TGCCGGCCCCGAAAA CGC-CGCCAAGATCC CGC AGATCATGGCGCACG TGGTGGAGGCGGAGA Acid345_0768 947425 - 949083 + | TPR repeat-containing protein TERM 732 949305 - 949329 + G 81 -11.3 -3.86346 | opp_overlap 949304 GCGGCGCTGCAAGAT GCGCTGGCGCA AAC TGCGGCTGCGC TTTCTGAAGACGTGC Acid345_0769 949080 - 949400 + | ethyl tert-butyl ether degradation EthD TERM 733 949962 - 949950 - g 72 -4.7 -4.59773 | overlap 949951 GGTCACGCTGAAAAA TGCGG TAT CCGCT GCCGAGACAATGGCA Acid345_0770 949414 - 951687 + | TPR repeat-containing serine/threonin protein kinase TERM 734 952258 - 952287 + G 70 -3.6 -4.62069 | gap 3, opp_overlap 952234, overlap 952259 952261 952262 CGTATCAGCAGGCGA TCG-C-CGCCG-CGC AAA GCGCCGGCGTGGTGA TTTTTACCGTGAACA Acid345_0771 951684 - 952544 + | hypothetical protein Acid345_0772 953089 - 952688 - | hypothetical protein TERM 735 953770 - 953782 + G 72 -4.7 -4.56597 | CACGCGAAATTCACG CCCAG CTT CAGGG TTTTTGCCCACCAGG TERM 736 953865 - 953855 - g 76 -3.2 -4.90266 | overlap 953857 GCGATGAACGAAAAA CACT TGC AGCG ATCGCCCCGCGCGGC Acid345_0773 953236 - 954165 + | cytochrome c, class I Acid345_0774 954162 - 954659 + | small integral membrane protein Acid345_0775 955647 - 955012 - | abortive infection protein Acid345_0776 958760 - 955815 - | excinuclease ABC subunit A TERM 737 957635 - 957651 + g 75 -12.3 -3.29263 | opp_overlap 957638 TCGTCGCGCCGTAGA GCAGCAG GTT CTGCTGC TTCTCCGGGAGCTGT TERM 738 958135 - 958163 + g 82 -6.6 -4.75356 | gap 1, overlap 958114 958135 AGTTCGCCGTCAATG CGCGCGC-GCGTG AAGC CGTGCTGCGCGAG TTTTTCCATCTCTTT TERM 739 959303 - 959281 - R 100 -5.5 -5.69793 | gap 1, opp_overlap 959282, overlap 959282 AGAGTAAAGAAAAAA GGGCGACTCC TTCC GG-GTCGCCT TTCTCTTTTGCTCTC TERM 740 959282 - 959302 + r 93 -10.4 -4.49352 | opp_overlap 959281 959282 GAGTAAAGAAAAAAG GGCGACTC CTTCC GGGTCGCC TTTCTCTTTTGCTCT TERM 741 959302 - 959282 - R 76 -9 -3.99436 | gap 1, opp_overlap 959282, overlap 959281 GAGTAAAGAAAAAAG GGCGACTCC TTCC GG-GTCGCC TTTCTCTTTTGCTCT TERM 742 959320 - 959343 + r 74 -4.5 -4.82998 | overlap 959322 TCTCTTTTGCTCTCC GAGCGACTC CAATGC GGGTCGCTA TTTCTTTTGGTTTCA Acid345_0777 960392 - 959400 - | hypothetical protein Acid345_0778 960488 - 961480 + | hypothetical protein TERM 743 961485 - 961497 + T 80 -10.5 -3.8374 | opp_overlap 961481 961484, overlap 961493 ATATTAAGTAACTAC GCGGC GTC GCCGC TTTCGGCTTTTTTCA TERM 744 961493 - 961504 + T 100 -7.2 -5.1925 | opp_overlap 961484, overlap 961485 TAACTACGCGGCGTC GCCG CTTT CGGC TTTTTTCACTTCTAA Acid345_0779 963307 - 961481 - | ATP dependent DNA ligase TERM 745 962506 - 962545 + g 76 -7 -4.46976 | gap 1, overlap 962501 ACGGCATCGCGGCGT GACGCGCGCCTTTGAGATC GGC GAACGCCG-GGTGCGCGTC TTTCTGTTTCTTGGT Acid345_0780 965593 - 963353 - | hypothetical protein TERM 746 964538 - 964506 - G 74 -11.3 -3.54129 | overlap 964507 964533 GAGATGTCGGGGAAA TCCCCACGTCTCG AAAATCG CGAGACATGGGGC ACCCAATCGGTGAAA TERM 747 964537 - 964507 - G 80 -14.8 -2.72263 | overlap 964506 964533 AGATGTCGGGGAAAT CCCCACGTCTCG AAAATCG CGAGACATGGGG CACCCAATCGGTGAA TERM 748 965743 - 965771 + r 75 -6 -4.60041 | gap 1, opp_overlap 965749, overlap 965746 965747 965749 CCATCGAAATTCTTT ACGA-CAGCCGCT TTCG AGCGGCTGATTGC TTTTTGGGGATCGGT TERM 749 965746 - 965767 + r 76 -10.1 -3.81256 | opp_overlap 965749, overlap 965743 965747 965749 TCGAAATTCTTTACG ACAGCCGCT TTCG AGCGGCTGA TTGCTTTTTGGGGAT TERM 750 965747 - 965766 + r 81 -13.6 -2.88031 | opp_overlap 965749, overlap 965746 965743 965749 CGAAATTCTTTACGA CAGCCGCT TTCG AGCGGCTG ATTGCTTTTTGGGGA Acid345_0781 966743 - 965853 - | oxidoreductase Acid345_0782 967310 - 966981 - | hypothetical protein TERM 751 967321 - 967301 - G 100 -18.3 -4.10552 | opp_overlap 967301 TTGGACCAAAGCAAA GGGCCGGCA TAG TGCCGGCCC TTATACTGCCGAGCG TERM 752 967301 - 967321 + g 100 -18.3 -3.40403 | opp_overlap 967301 TTGGACCAAAGCAAA GGGCCGGCA TAG TGCCGGCCC TTATACTGCCGAGCG Acid345_0783 970468 - 967343 - | TonB-dependent receptor TERM 753 967908 - 967878 - G 71 -8.2 -4.04394 | opp_overlap 967886 GGGAAATCAACCAAA CCGCTGATGGTCAC GTG GTGACGTTCATCGG AATAAGTCGGTCCCC TERM 754 970498 - 970520 + r 74 -7 -4.23104 | overlap 970513 TGTCTCTGCAGTAGC CGTTGCACGT ACG ATCTGCAACG TTTGTTGCAGTTTCG TERM 755 970513 - 970530 + r 74 -9.9 -3.64822 | overlap 970498 CGTTGCACGTACGAT CTGCAAC GTTT GTTGCAG TTTCGATCGAGCGAT TERM 756 970789 - 970766 - R 100 -16.8 -4.21812 | TCCCATTCAAAAGAA GAGGGCACCT TGGG AGGTGCCCTC GAGTAAGCCAGGTTT Acid345_0784 974040 - 970813 - | hypothetical protein Acid345_0785 974604 - 975467 + | hypothetical protein TERM 757 975486 - 975506 + F 100 -14 -5.38054 | TCACGAATCGCGAGA GCCGCTGC CGAGT GCAGCGGC TTTTTGTTTCTCCGG Acid345_0786 975564 - 976415 + | hypothetical protein Acid345_0787 976787 - 976446 - | histidine triad (HIT) protein Acid345_0788 976799 - 977317 + | acetyltransferase Acid345_0789 978148 - 977387 - | rare lipoprotein A TERM 758 977957 - 977967 + g 83 -4.6 -5.17054 | overlap 977947 GTTGGGCTTTCGCGC TGCC GGA GGCG TTTTTTGCGTGTTCT TERM 759 977986 - 978003 + g 74 -2.7 -4.9792 | gap 1 TTTGCGTGTTCTTCG CCGATCGC GTG GT-ATCGG TTTTTGTCTGCGGTG TERM 760 978043 - 978070 + g 100 -4.8 -5.68438 | gap 1 TTTGTGAGGGCGGAG GTGGCGGAG-GCG GAT TGTACTTCGCCGC TTTTTTCTTTCCTCC Acid345_0790 978405 - 978175 - | hypothetical protein Acid345_0791 978745 - 979506 + | hypothetical protein Acid345_0792 979598 - 980290 + | hypothetical protein TERM 761 980335 - 980354 + F 100 -12.2 -5.53079 | GGAACCTCCGACTCA GCAGCAGA CTTG TCTGCTGC TTTTTTCTGTATTTT Acid345_0793 980576 - 982696 + | radical SAM family Fe-S protein TERM 762 982719 - 982750 + T 100 -13 -4.30416 | opp_overlap 982719, overlap 982721 CTCTCGCTTCACAAA TGCGATACCCCGCG AACA TGCGGGGTTTCGTA TTTTGGATTCCTAGT TERM 763 982750 - 982719 - T 76 -10.1 -3.85698 | opp_overlap 982719 982721 CTCTCGCTTCACAAA TGCGATACCCCGC GAACAT GCGGGGTTTCGTA TTTTGGATTCCTAGT TERM 764 982721 - 982748 + T 89 -13.4 -3.75051 | opp_overlap 982719, overlap 982719 CTCGCTTCACAAATG CGATACCCCGCG AACA TGCGGGGTTTCG TATTTTGGATTCCTA Acid345_0794 984943 - 982769 - | lysine decarboxylase transcriptional regulator, CadC TERM 765 985285 - 985263 - g 74 -6.8 -4.30576 | CCCGGAGTACGAAAA GGTGCGCCTG GCG CCGGCACTCC GCTCAATGGATTAAC Acid345_0795 985164 - 986699 + | thiol oxidoreductase-like TERM 766 986717 - 986737 + F 100 -8.2 -5.83211 | opp_overlap 986717 GCAGTGAAAGGGAAA GCCAGCGC ATTTA GCGATGGC TTTTTTGTTTTGGTA TERM 767 986737 - 986717 - f 71 -8.2 -3.85909 | opp_overlap 986717 GCAGTGAAAGGGAAA GCCAGCGC ATTTA GCGATGGC TTTTTTGTTTTGGTA TERM 768 987438 - 987454 + G 83 -9.4 -4.30719 | TCTGAGTATCCTCAC GCCGCT CGTAT AGCGGC TTTATTCTCCAAGAC TERM 769 987660 - 987647 - g 85 -9.5 -4.4261 | CGCCGAAGATGAAAA CCGCC TGAA GGCGG CGCAAGCTGCTGGCG Acid345_0796 986835 - 987680 + | short-chain dehydrogenase/reductase SDR Acid345_0797 988234 - 987710 - | hypothetical protein Acid345_0798 988431 - 989210 + | UbiE/COQ5 methyltransferase TERM 770 989255 - 989232 - f 76 -11.8 -3.06183 | overlap 989235 GTCATGCTGAGCGAA GAATCCGCAC CACG ATGCGGATTC GCAGTCGAAGCACCC TERM 771 990289 - 990311 + G 74 -13.4 -2.61264 | overlap 990288 GAAGATGGCAAGGCC GTAGGCGTGG GGG CCACGCCGAC CTTCTGGGTGAACCA Acid345_0799 989314 - 990975 + | vitamin K epoxide reductase TERM 772 992001 - 991991 - g 90 -6.8 -5.06414 | opp_overlap 991991 991989 CCTCGCCAAGAAAAA GCTG CCA CAGC TCTTCGTGGATAATC Acid345_0800 990993 - 992114 + | putative lipoprotein signal peptide Acid345_0801 992157 - 993383 + | proteinase inhibitor I4, serpin TERM 773 994089 - 994069 - g 76 -12.5 -3.07443 | opp_overlap 994080 GGAGACGCTACGCAA CGAGCGCCC CGT GGACGCCCG CTGCATCCAGTTCTC TERM 774 994581 - 994608 + G 71 -11.2 -3.17571 | opp_overlap 994569 AGACCGGCATCACCC GCGCGCAGGAAG ATTT CTTCCCGCTCGC TTGCGTTACACCGTT Acid345_0802 993566 - 995251 + | radical SAM family Fe-S protein TERM 775 995271 - 995300 + F 72 -2.1 -4.93296 | gap 1, overlap 995272 995273 TTCCCCCTACTCTCC CA-CGCCCCTTC CGTTAAT GGAGGGGCGGTC TTTTTGTCATCGTGA TERM 776 995272 - 995298 + F 74 -7.2 -4.08644 | overlap 995271 995273 TCCCCCTACTCTCCC ACGCCCCTTC CGTTAAT GGAGGGGCGG TCTTTTTGTCATCGT TERM 777 995334 - 995322 - f 70 -9.1 -3.65351 | overlap 995330 TCATCGTGAGCGAAA CGGAC AAA GTCCG CGAAGTCGAACGATC TERM 778 995644 - 995615 - g 75 -8.5 -4.07885 | overlap 995616 GATCGTTGCGCAAAA TCCTGCTGCCGTT GCTA ACCGGCAGCAGAC CATAGAGCATTTGCG TERM 779 995643 - 995616 - g 73 -12 -3.04517 | overlap 995615 ATCGTTGCGCAAAAT CCTGCTGCCGTT GCTA ACCGGCAGCAGA CCATAGAGCATTTGC Acid345_0803 995421 - 995864 + | hypothetical protein TERM 780 996094 - 996126 + F 70 -2.7 -4.72986 | gap 1, opp_overlap 996097, overlap 996099 TCCCGGGGAGGGAAT TTATTGGAGAGCGG AGGCAC CCGCTCTCCT-TAC TTTTTGGTGACGATC TERM 781 996099 - 996122 + F 93 -13.9 -3.84901 | opp_overlap 996097, overlap 996094 GGGAGGGAATTTATT GGAGAGCGG AGGCAC CCGCTCTCC TTACTTTTTGGTGAC Acid345_0804 996395 - 997369 + | A/G-specific DNA glycosylase Acid345_0805 997369 - 997899 + | peroxiredoxin-like Acid345_0806 998087 - 999778 + | peptidase M28 TERM 782 999820 - 999803 - T 75 -12.7 -2.63301 | opp_overlap 999803 TACATCGCGAGACGA GGCTGCG GAGA CGCAGCC TTTTTCTTTACCAGA TERM 783 999803 - 999820 + T 100 -12.7 -5.27335 | opp_overlap 999803 TACATCGCGAGACGA GGCTGCG GAGA CGCAGCC TTTTTCTTTACCAGA Acid345_0807 1000325 - 999828 - | hypothetical protein Acid345_0808 1000440 - 1001900 + | TPR repeat-containing protein Acid345_0809 1002020 - 1004248 + | hypothetical protein Acid345_0810 1006093 - 1004249 - | TonB-like protein TERM 784 1006455 - 1006445 - g 74 -6.8 -4.2704 | opp_overlap 1006445 1006447 TTCACGACGAAGAAA GTCC ACG GGAC TTGGTTTGAATTCAA Acid345_0811 1006181 - 1006624 + | hypothetical protein Acid345_0812 1007278 - 1006625 - | cyclase/dehydrase TERM 785 1006652 - 1006676 + g 74 -7.2 -4.26327 | gap 1 TTCGGGTGGACGGGT GTGC-TCGACT GGTG AGTCGAAGCGC TTGTTTTCGTGGCTG TERM 786 1007487 - 1007500 + G 79 -5.3 -4.82901 | GAGAAGACGCCTGCT TCGAA GATG TTCGA TTTTTATGCAAAACG Acid345_0813 1007400 - 1008155 + | hypothetical protein Acid345_0814 1008152 - 1010482 + | Amylo-alpha-1,6-glucosidase TERM 787 1010528 - 1010553 + T 76 -10.3 -3.63515 | opp_overlap 1010529, overlap 1010529 CGGCGAGAATCGAAA AGGCGTGCCGC TCGA GCAGCACGCCC TTCTTAACGGTGCGG TERM 788 1010552 - 1010529 - T 100 -16 -4.3208 | opp_overlap 1010528 1010529 GGCGAGAATCGAAAA GGCGTGCCGC TCGA GCAGCACGCC CTTCTTAACGGTGCG TERM 789 1010529 - 1010552 + T 79 -13.8 -2.77895 | opp_overlap 1010529, overlap 1010528 GGCGAGAATCGAAAA GGCGTGCCGC TCGA GCAGCACGCC CTTCTTAACGGTGCG Acid345_0815 1011100 - 1010573 - | rubrerythrin Acid345_0816 1011541 - 1011179 - | hypothetical protein Acid345_0817 1011759 - 1012886 + | radical SAM family Fe-S protein Acid345_0818 1015090 - 1012883 - | hypothetical protein TERM 790 1015338 - 1015355 + H 95 -12.7 -4.13748 | overlap 1015350 TATTCCGGTTGCTTT CCCTCGC AGCG GCGAGGG TTTCGTGTTTTTACC Acid345_0819 1015759 - 1016007 + | hypothetical protein Acid345_0820 1016227 - 1018755 + | glycogen/starch/alpha-glucan phosphorylase Acid345_0821 1020221 - 1018800 - | PAS/PAC sensor signal transduction histidine kinase TERM 791 1020011 - 1020021 + g 71 -6.8 -4.14472 | opp_overlap 1020009 1020011, overlap 1020001 GCAGCTGCTGAAACA GGAC CCA GTCC TTTTGAGCATCTTCC Acid345_0822 1020564 - 1021538 + | response regulator receiver protein TERM 792 1022787 - 1022812 + G 78 -3.1 -5.03145 | overlap 1022789 AGAAAGTTTTGCTGC GGGACCCTTCG TTGC CGAAGGCGCAC TTTTTTGAAGGATTG Acid345_0823 1021736 - 1023244 + | TPR repeat-containing protein TERM 793 1024904 - 1024892 - g 78 -7.7 -4.43309 | overlap 1024851 GAACCGCAACGAAAA TCGAC TCC GTCGA GGTCCGCTGGCCATC Acid345_0824 1023346 - 1025016 + | ASPIC/UnbV TERM 794 1025183 - 1025206 + F 100 -10.2 -5.50723 | opp_overlap 1025183 TACAGCCTTCTTAAA CCACCGTCGC AACC GTGCCGGTGG TTTTTCTTTTGCTCC Acid345_0825 1025268 - 1026275 + | ABC transporter, substrate-binding protein, aliphatic sulphonates Acid345_0826 1026291 - 1027112 + | ABC transporter, ATPase subunit TERM 795 1027427 - 1027462 + G 74 -2.7 -5.02323 | gap 2, overlap 1027417 1027430 TCTGTTGGCTACCGG TTGCCATCT-TGTG-GT TTGG ACTCACAGAGAAGGCGA TTTTGTTTGTGGTGG Acid345_0827 1027105 - 1027863 + | ABC aliphatic sulfonate transporter, inner membrane subunit Acid345_0828 1027916 - 1028854 + | sulfate adenylyltransferase subunit 2 TERM 796 1029139 - 1029153 + G 82 -10 -4.13767 | GGAATCACTATTGAC GTAGCG TAT CGCTAC TTTTCAACTGCGAAA TERM 797 1030019 - 1029997 - g 72 -9.2 -3.77832 | TTTGAAACGGAACAA TCGTTCGTGT TGC ACATGAACGA CATCGCGATCGTGGA Acid345_0829 1028854 - 1030485 + | sulfate adenylyltransferase subunit 1 Acid345_0830 1030478 - 1031182 + | phosphoadenylylsulfate reductase (thioredoxin) TERM 798 1031308 - 1031334 + G 87 -7.9 -4.8622 | overlap 1031312 AACGATCGTCGTCCT TCTACCGCCGG TGACC CCGGCGGTTCA TTTTTGCTTGAAAAA TERM 799 1031312 - 1031330 + G 87 -13.1 -3.88182 | overlap 1031308 ATCGTCGTCCTTCTA CCGCCGG TGACC CCGGCGG TTCATTTTTGCTTGA Acid345_0831 1031237 - 1032994 + | hypothetical protein Acid345_0832 1033304 - 1033041 - | hypothetical protein TERM 800 1033812 - 1033839 + H 83 -8.4 -4.41494 | gap 1, opp_overlap 1033809 1033808 1033812, overlap 1033815 1033817 GCGAGTGGAAACGCA GCACGCTGCACGG ATT CCATGCAGTG-GC TTTTAATTCCGGCTC Acid345_0833 1033911 - 1035656 + | hypothetical protein Acid345_0834 1035676 - 1036605 + | polysaccharide export protein TERM 801 1038535 - 1038564 + G 70 -12.1 -2.79831 | gap 1, overlap 1038534 1038537 ACATGTGGGTGCTTC CGGCCGGCCATCGG CCT CCGA-GCCCGGCTG ATCTTTTCACCTCCA Acid345_0835 1036662 - 1038893 + | protein-tyrosine kinase TERM 802 1039519 - 1039469 - g 88 -15.7 -3.14647 | gap 3, opp_overlap 1039465, overlap 1039433 AGCGACCAGACTTAA TGAGCCGGTTCGGCGCGGCA-GCC GACTCG GGCCTGCCGCGC-GAAC-GACTCA AAGATCTATCAGAGA Acid345_0836 1038928 - 1039926 + | hypothetical protein Acid345_0837 1039966 - 1041348 + | polysaccharide biosynthesis protein Acid345_0838 1041562 - 1042647 + | serine phosphatase Acid345_0839 1042776 - 1043468 + | glyoxalase/bleomycin resistance protein/dioxygenase TERM 803 1043737 - 1043683 - g 71 -12.8 -2.54574 | overlap 1043680 1043682 CATTCCAACCAAGAC GCTCGTCGCCAGCGCCTACGC-CGCG CATGT CGCGTGCAGAGGCGCAGACTACG-GC TTCACCACTGGCGGC TERM 804 1044225 - 1044210 - g 83 -5.4 -4.91712 | CCGAAGGCATAAAAA TTCGCA CCGA CGCGAA GTGTATCTCGCTTTC Acid345_0840 1043528 - 1044907 + | mercuric reductase Acid345_0841 1045424 - 1044930 - | endoribonuclease L-PSP TERM 805 1045642 - 1045618 - H 71 -10.7 -3.18383 | overlap 1045619 ACCGCGAGGGATTAA GGCTTCCGTCC GCT GGACGAAAGCG CCGCAAATGTAGAAA TERM 806 1045641 - 1045619 - H 81 -14.2 -2.50816 | overlap 1045618 CCGCGAGGGATTAAG GCTTCCGTCC GCT GGACGAAAGC GCCGCAAATGTAGAA Acid345_0842 1045700 - 1046362 + | hypothetical protein TERM 807 1047267 - 1047282 + G 80 -10.4 -3.95153 | ATCGAATCGCGCCTC CGCCGT TACG ACGGCG TTTATCGATGGTTCC Acid345_0843 1046364 - 1048505 + | PAS/PAC sensor signal transduction histidine kinase Acid345_0844 1048538 - 1048930 + | response regulator receiver protein Acid345_0845 1049003 - 1049554 + | response regulator receiver protein Acid345_0846 1050512 - 1050006 - | hypothetical protein TERM 808 1050284 - 1050249 - G 80 -10.4 -4.0098 | gap 1, opp_overlap 1050257 1050261 1050272 CCCCAACTGAAACAA CGAC-GCCTGCGATTGC CCC GCAATCGCTGCCTGCCG CGAGATTGCGGGCGA Acid345_0847 1054087 - 1050524 - | hypothetical protein TERM 809 1050860 - 1050842 - G 79 -13.8 -3.05596 | overlap 1050819 CACCGTCCCAGGGAA CGACGGCG TTG CGCCGCCG TAGGACTCGAAGAGA TERM 810 1051619 - 1051598 - G 75 -12.3 -3.21099 | gap 1, opp_overlap 1051595 1051598, overlap 1051601 GCCGGCGAGCAGGAA CACCG-CGCC GTT GGCGACGGTG CGATAGATCTTGTAA Acid345_0848 1056343 - 1054100 - | hypothetical protein Acid345_0849 1059213 - 1056340 - | hypothetical protein Acid345_0850 1062761 - 1059210 - | hypothetical protein TERM 811 1061386 - 1061373 - G 72 -9.5 -3.72695 | AGCGTCGGCAGCAAA GCCCG TCTT CGGGC CGACCATTTCCTGGA TERM 812 1062722 - 1062735 + g 77 -8.1 -4.4078 | TCGGATTATTCAGCA CCGCA CTCT TGCGG TTTTCATTACAGCAG Acid345_0851 1063120 - 1062758 - | hypothetical protein Acid345_0852 1063436 - 1063137 - | hypothetical protein Acid345_0853 1064017 - 1063466 - | hypothetical protein TERM 813 1063989 - 1064001 + g 74 -6.2 -4.54047 | TACTTCGTCGGATTG CCGC CCGCA GCGG TTTTCTGTGGACTCA Acid345_0854 1065156 - 1064014 - | hypothetical protein Acid345_0855 1065517 - 1065146 - | hypothetical protein Acid345_0856 1066176 - 1065514 - | hypothetical protein Acid345_0857 1069390 - 1066208 - | hypothetical protein TERM 814 1066420 - 1066443 + g 76 -4.4 -4.72631 | overlap 1066423 CTTCGATTTCGCCTG GTTTCGCCAG TCCG CCGGCGATGC TTTTCTTGAATTCCT TERM 815 1066756 - 1066810 + g 90 -10.1 -4.56597 | gap 2, overlap 1066759 1066760 GTGCCTTGTGCAGAT CTCCTTCGGCTTCTGCGAGGCGCGCTT GCA AAGCG-GCTTCGC-GATGCTGAACTAG TTTTTCGCCAGAGAG TERM 816 1066760 - 1066806 + g 74 -13.9 -2.53903 | gap 2, overlap 1066759 1066756 CTTGTGCAGATCTCC TTCGGCTTCTGCGAGGCGCGCTT GCA AAGCG-GCTTCGC-GATGCTGAA CTAGTTTTTCGCCAG TERM 817 1067271 - 1067295 + g 73 -2.8 -4.77567 | gap 1, overlap 1067272 GGCGCTGTCGTCACG TGCTCGTCCGT ATGA ACGGG-GGGCG TTTTCTTCTGCGGCT TERM 818 1068161 - 1068176 + g 77 -11.8 -3.55444 | GTCGCCTTTGCGTTC CGCGCC GATG GGCGCG TTTGAAAGCTGCCAC TERM 819 1068224 - 1068257 + g 86 -5.2 -5.0916 | GAGAGGGAAGATCTT GAAGCCTTGGCCGG CGGTGT CCTGGCAACGCTTC TTTTTCTGTTGAGGA TERM 820 1068308 - 1068319 + g 91 -7.2 -5.29846 | overlap 1068306 GGTTGCGGCATCGGC GGCG GCAT CGCC TTTTTCTTTACGCTT Acid345_0858 1069644 - 1069387 - | hypothetical protein Acid345_0859 1071545 - 1069641 - | AAA ATPase Acid345_0860 1072828 - 1071545 - | hypothetical protein Acid345_0861 1074098 - 1073448 - | hypothetical protein Acid345_0862 1074684 - 1074154 - | hypothetical protein TERM 821 1074616 - 1074634 + g 82 -6.1 -4.84761 | GTACTTGCCGTCCCA CTTCAAA CGAAA TTTGAAG TTTTTGTACGGATCT Acid345_0863 1076325 - 1074697 - | phage tail sheath protein Acid345_0864 1076621 - 1076382 - | hypothetical protein Acid345_0865 1080416 - 1076820 - | hypothetical protein TERM 822 1077972 - 1077988 + g 78 -10.9 -3.75461 | overlap 1077968 CTCGACTTTGGGCGT CTGCGAA GCT TTCGCAG TTTGATCAACCTTTG TERM 823 1080440 - 1080425 - R 70 -6.8 -4.11216 | CGCTCATCGTGAAAA GCACAG ACTT CTGCGC ATGTGGTTGCAACTT Acid345_0866 1081643 - 1080588 - | sigma-54 dependent trancsriptional regulator TERM 824 1080866 - 1080882 + g 74 -2.2 -5.00616 | overlap 1080867 GCCAATCCGCACGTG TGAGGG AATCG CCTTCG TTTTTTAGGAACAAC TERM 825 1081425 - 1081439 + g 79 -5.6 -4.72272 | opp_overlap 1081425, overlap 1081426 ATGCACGGTGACGAA CGGGAA GCG TCCCCG TTTTTCGTCGAGGGC TERM 826 1082701 - 1082722 + H 70 -10.1 -3.34398 | opp_overlap 1082714 1082717, overlap 1082699 GAAGCATGGGGGTGA CGTACCTGG AAAA CCAGGCACG TGTTTGACACGGCCC TERM 827 1084913 - 1084895 - H 73 -5.3 -4.66609 | gap 1, overlap 1084896 1084897 GAGCCCAGTGAAAAA CTTGCTGC ACCC GCAGC-AG AACAATAATCCGGTA Acid345_0869 1085392 - 1086282 + | formate dehydrogenase beta subunit Acid345_0870 1086269 - 1086937 + | formate dehydrogenase gamma subunit TERM 828 1086936 - 1086918 - f 76 -10.2 -3.62597 | opp_overlap 1086928, overlap 1086929 GGTATGCGCGAATAA CCGCGAGG GAA CCTCGCTG ATGCGTGGCGTTTCG Acid345_0871 1086937 - 1087692 + | hypothetical protein Acid345_0872 1089120 - 1088077 - | HPr kinase TERM 829 1089017 - 1088991 - G 75 -4.2 -4.77867 | overlap 1088992 ACAGAGAACAGAAAA CTCCCGCGCAGC GAA GCAGCGTGCGAA ACTCCGTGGTTGTCG TERM 830 1089648 - 1089662 + G 71 -12.8 -2.54634 | overlap 1089647 GTCTTCACCGCCGAA CGGCCG TTG CGGCCG ATTGCTGATCTACCA TERM 831 1089894 - 1089905 + G 76 -4.4 -4.76041 | GAAATGCTCTGGGTG GTTG ACGA CAAC TTTTTGGTCGATCTC Acid345_0873 1089183 - 1090688 + | radical SAM family Fe-S protein Acid345_0874 1090682 - 1092187 + | radical SAM family Fe-S protein Acid345_0875 1092196 - 1093683 + | radical SAM family Fe-S protein Acid345_0876 1093683 - 1095068 + | radical SAM family Fe-S protein Acid345_0877 1095065 - 1095880 + | hypothetical protein TERM 832 1096138 - 1096163 + G 70 -3.9 -4.67011 | gap 1, overlap 1096140 GCGATTCGATCTGCC GAGGGA-CGGGG AAG CTCCGATTCCGC TTTTTACCTGGCGTT Acid345_0878 1095877 - 1096884 + | hypothetical protein Acid345_0879 1096881 - 1098347 + | radical SAM family Fe-S protein Acid345_0880 1098353 - 1100242 + | amidohydrolase TERM 833 1100757 - 1100746 - gf 77 -2.2 -5.03145 | CAACCGTGCAAAAAA CGAA TTGT TCCG CATTATGCGAGACGG Acid345_0881 1100214 - 1101269 + | radical SAM family Fe-S protein TERM 834 1101486 - 1101531 + G 100 -13.3 -4.79667 | gap 1, overlap 1101487 AAGGGTATCTCCTAG TGGCAGGGCGTTCGTT-CGACG GTT CATCGTGACGATCGCCTTGCCG TTTTTGATGAGTTTT TERM 835 1101487 - 1101530 + G 87 -14.6 -3.46174 | gap 1, overlap 1101486 AGGGTATCTCCTAGT GGCAGGGCGTTCGTT-CGACG GTT CATCGTGACGATCGCCTTGCC GTTTTTGATGAGTTT Acid345_0882 1101454 - 1102512 + | hypothetical protein Acid345_0883 1102509 - 1102775 + | hypothetical protein Acid345_0884 1102786 - 1103148 + | cytochrome c oxidase, subunit II Acid345_0885 1103151 - 1103621 + | cytochrome c, class I Acid345_0886 1103623 - 1104861 + | hypothetical protein Acid345_0887 1104947 - 1105495 + | transcription antitermination protein nusG Acid345_0888 1105492 - 1108314 + | polysaccharide export protein TERM 836 1108753 - 1108741 - g 76 -3.3 -5.02074 | overlap 1108742 GGACGCCCTAAAAAA GCTCC ATC GGAGA ACCGAGATTGCAGAA Acid345_0889 1108325 - 1109611 + | lipopolysaccharide biosynthesis Acid345_0890 1109595 - 1110935 + | polysaccharide biosynthesis protein TERM 837 1111802 - 1111782 - g 72 -5.3 -4.45151 | opp_overlap 1111784, overlap 1111784 AAGAGGGAATTAAAA CACCGTGGC TGG GCCATGGTT TCTATTCTTTTCGCT TERM 838 1111784 - 1111800 + G 88 -10.1 -4.45253 | opp_overlap 1111784 1111782 GAGGGAATTAAAACA CCGTGGC TGG GCCATGG TTTCTATTCTTTTCG Acid345_0891 1110938 - 1112119 + | O-antigen polymerase Acid345_0892 1112116 - 1112955 + | glycosyl transferase family protein TERM 839 1113408 - 1113388 - g 74 -13.3 -2.62263 | opp_overlap 1113387 1113386 1113385 ATGGCGTTGAGACGA GCGATCAGC GCC GCCGATCGC GTCATTTGCGTTAGC Acid345_0893 1112965 - 1114134 + | glycosyl transferase, group 1 Acid345_0894 1114131 - 1114955 + | WecB/TagA/CpsF family glycosyl transferase TERM 840 1114956 - 1114966 + F 73 -5.4 -4.57304 | opp_overlap 1114956 CCATTGGTGGAGTAA CGAA GTT TTCG TTTGTTTGATTGCGT Acid345_0895 1115049 - 1116065 + | NAD-dependent epimerase/dehydratase TERM 841 1116100 - 1116117 + G 100 -12.7 -4.55826 | opp_overlap 1116092 CAACCCAGTAGCGAG GCGCGGA CTTC TCCGCGC TTTTGCTCTTTTGGA TERM 842 1117807 - 1117792 - g 71 -6.8 -4.2349 | gap 1, opp_overlap 1117762 1117794, overlap 1117793 TTTGCACATTGAAAA CGCGCGG TTT CC-CGCG TTTTCTCCGGATGGA TERM 843 1117794 - 1117807 + G 83 -9.5 -4.38712 | opp_overlap 1117792 1117793, overlap 1117762 TGCACATTGAAAACG CGCGG TTTC CCGCG TTTTCTCCGGATGGA Acid345_0896 1116062 - 1118032 + | hypothetical protein TERM 844 1118565 - 1118594 + G 78 -8.5 -4.16842 | opp_overlap 1118558, overlap 1118558 1118556 1118566 GGAGATGAGATCGAG ACCGCTCTCTACT ATTC AGTGGGGGGCGGC TTTATTGCGCGTGAA TERM 845 1118566 - 1118593 + G 73 -12 -3.09784 | opp_overlap 1118558, overlap 1118558 1118556 1118565 GAGATGAGATCGAGA CCGCTCTCTACT ATTC AGTGGGGGGCGG CTTTATTGCGCGTGA TERM 846 1118646 - 1118636 - g 72 -4.6 -4.67982 | opp_overlap 1118636 GGCTAGGGAAGAAAA GCAG GAG CCGC CTTATCCCTTCTCAA TERM 847 1118913 - 1118899 - g 93 -5.6 -5.60993 | TTGCCGAGAAAAAAA CCAGCG ATC CTCTGG GGGCGTTGGACTGGG Acid345_0897 1118148 - 1119500 + | L-serine dehydratase 1 Acid345_0898 1122013 - 1119662 - | Alpha-glucosidase Acid345_0899 1122129 - 1123214 + | LacI family transcription regulator TERM 848 1123441 - 1123427 - f 85 -9.2 -4.431 | opp_overlap 1123438 TATCCATCGAGAAAA GCCGGC ATG ACCGGC GAAGCTGTATTCGCG TERM 849 1123976 - 1123991 + G 100 -4.6 -6.09196 | ATGTTCGTCGTACTA CCGGTA ATGA TTCCGG TTTTTTTGTTTTCAC TERM 850 1124748 - 1124763 + G 71 -7.6 -4.08216 | opp_overlap 1124748 CACCAACTTCAACAA GAGCAA CAAG TTGCTC TTTTGGACCGGCTAC Acid345_0900 1123798 - 1127382 + | hypothetical protein TERM 851 1127414 - 1127387 - f 75 -11.2 -3.33815 | overlap 1127388 1127390 ACTCCTTCTAACCAA CGATGGGCGGCC GCAA GGTCGCCCATCC GATAAATCACTCTCG TERM 852 1127413 - 1127388 - f 83 -14.7 -2.60075 | overlap 1127387 1127390 CTCCTTCTAACCAAC GATGGGCGGCC GCAA GGTCGCCCATC CGATAAATCACTCTC TERM 853 1127433 - 1127455 + F 100 -9.1 -5.14563 | overlap 1127434 AAATCACTCTCGAAT CGGGATGGC AGCCA GCCATCCCC TTTTTTCCTGAGGGC TERM 854 1127434 - 1127454 + F 86 -12.6 -3.68256 | overlap 1127433 AATCACTCTCGAATC GGGATGGC AGCCA GCCATCCC CTTTTTTCCTGAGGG TERM 855 1129322 - 1129299 - g 70 -3.8 -4.57569 | gap 1, overlap 1129303 TCACCTTTGGAAAAA GC-AACGGTTG GCT CGACCGTCAGC CTGCAATCATCTCGC Acid345_0901 1127585 - 1129642 + | Beta-galactosidase TERM 856 1130205 - 1130226 + G 78 -6.5 -4.65895 | gap 1 TTTCGGAATCTCGTA CCACC-GCGC GGA GCACTGGTGG TTTTTCGATGGCGGC TERM 857 1130552 - 1130533 - g 100 -10 -4.94972 | overlap 1130538 1130549 TACTACAAGGAAAAA GCAATGCC GCAA GGCACTGC GGTTCACGACGTCGA Acid345_0902 1129639 - 1131156 + | Alpha-L-fucosidase TERM 858 1131214 - 1131158 - T 100 -19 -3.07192 | gap 1, opp_overlap 1131176, overlap 1131176 1131210 AATTTCGCCAATAGA TTTTA-CGGACGAGTACAAGGGGCTGC CGCG GCAGCCCCTTGTACTCGTCAAACAGAA GGCCTGATTACCGTA TERM 859 1131195 - 1131176 - T 95 -15 -3.44527 | opp_overlap 1131176, overlap 1131158 TACGGACGAGTACAA GGGGCTGC CGCG GCAGCCCC TTGTACTCGTCAAAC TERM 860 1131176 - 1131195 + T 95 -15 -3.44051 | opp_overlap 1131176 1131158 TACGGACGAGTACAA GGGGCTGC CGCG GCAGCCCC TTGTACTCGTCAAAC Acid345_0903 1132379 - 1131222 - | xylose isomerase TERM 861 1132314 - 1132344 + g 72 -9.6 -3.67611 | opp_overlap 1132303 1132301 1132300 1132332 1132341 AGGATCGCGGCCGCG GTTCGCGATCGTCC AAA GGCCGAACGAGAAC TTGTGTTCCGGTCGC Acid345_0904 1133912 - 1132395 - | xylulokinase Acid345_0905 1135124 - 1133922 - | ABC sugar transporter, inner membrane subunit Acid345_0906 1136674 - 1135121 - | ABC sugar transporter, ATPase subunit Acid345_0907 1137735 - 1136677 - | ABC sugar transporter, periplasmic binding protein TERM 862 1136785 - 1136821 + g 75 -10.3 -3.68222 | gap 1, opp_overlap 1136784 1136781 1136778 1136785 GCGATCAACAACAAT CGGCGCGAGAAGAATT GAAGGA ACTTCTT-TCGCGCCG TTGTTAACGTTCGAA TERM 863 1138112 - 1138098 - g 83 -5 -5.03747 | AAATCGCGGAAAAAA TTGGCT ATA AACCAA ATCTCGCGGCACGTT Acid345_0908 1137962 - 1139035 + | LacI family transcription regulator Acid345_0909 1140965 - 1139184 - | ASPIC/UnbV TERM 864 1139464 - 1139494 + g 81 -3.9 -5.06414 | gap 1, opp_overlap 1139462 1139480, overlap 1139469 GTGGGAGAGATCACC GTGATCCGCGCACC AATC GCGGCGCGG-TTAC TTTTTGTTCCCACGA TERM 865 1140383 - 1140352 - G 71 -12.5 -2.53392 | AAACTTGGCAAGTTA TTTATGTCGAGGT GGACGT ACCTCGACACAAA CAGATCTACATTGCC TERM 866 1141754 - 1141729 - g 72 -6.7 -4.28656 | overlap 1141720 ACTCAACACCGAAAA CGGCGAAGTCG GCAA CGTCATCACCG GCGCCCAGGTTCGCG TERM 867 1141948 - 1141964 + G 72 -6.5 -4.39568 | opp_overlap 1141947 CAACAACAACGACAT TGGTTCG CAG CGCACCA TTTTGATGTATCCGT TERM 868 1143275 - 1143304 + G 72 -9.3 -3.76125 | gap 1, overlap 1143274 GACGTCGAGTTCTAC GC-TGGCGATACCT GGA AGGTGACGCCACGC TTTACCTTGGACTAC Acid345_0910 1141340 - 1144972 + | Cna B-type protein TERM 869 1145020 - 1144991 - f 78 -13.6 -2.59686 | opp_overlap 1144992, overlap 1144987 GTAGACATCAACCCA CGGCCGGAGTGA CAATAC TCACTCCGGCCT TTTCCTTGCTATCAA TERM 870 1144992 - 1145019 + F 100 -17.1 -4.4773 | opp_overlap 1144991 1144987 TAGACATCAACCCAC GGCCGGAGTGA CAATAC TCACTCCGGCC TTTTCCTTGCTATCA TERM 871 1146074 - 1146063 - g 71 -7.2 -4.13767 | overlap 1146064 TCGCCTACCTCAAAA CCCG TCGC CGGG AGAAGGCTGTCTCTG TERM 872 1146388 - 1146371 - g 71 -10.5 -3.59979 | GTCTCGGATCGCAAA GGCGACG TTGA CGCCGCC CGGACAGAGTTGGAT Acid345_0911 1145129 - 1146676 + | TPR repeat-containing protein Acid345_0912 1146681 - 1148927 + | TPR repeat-containing protein Acid345_0913 1148962 - 1150767 + | hypothetical protein Acid345_0914 1150885 - 1153413 + | MscS mechanosensitive ion channel Acid345_0915 1154384 - 1153410 - | TPR repeat-containing protein Acid345_0916 1155412 - 1154426 - | glycosidase, PH1107-related TERM 873 1155595 - 1155605 + G 73 -3.2 -4.82901 | overlap 1155584 1155592 GTATTCGCCCAACAG TCGG CGG CTGA TTTTTATAAGCGGGG TERM 874 1155955 - 1155972 + G 74 -12.7 -2.90392 | opp_overlap 1155947, overlap 1155957 ACCAAAGGGGACCTC GACGGCG CCAT CGCCGTC TATCGTTCCGCACTG Acid345_0917 1155559 - 1157259 + | TPR repeat-containing protein TERM 875 1157373 - 1157390 + F 71 -9.9 -3.55368 | opp_overlap 1157385 1157386, overlap 1157386 1157389 CAATGTACTTTCTCG GTCACGT GTAA ACGTGAC TTGTGTCACTTGCCT TERM 876 1157860 - 1157837 - g 78 -3.1 -5.06816 | overlap 1157839 ACCTTCGAACAAAAA TCCGTCAGC GTTTCA GCTGACCAA TCTGCACGTCTCGAC Acid345_0918 1157558 - 1161169 + | Cna B-type protein TERM 877 1161188 - 1161209 + F 100 -13.7 -4.46976 | opp_overlap 1161188 1161187 GTAACCTCAACCAAC GGGGGAGCC TCTG GGCTCCCTC TTTCTCTTTCTTCCT Acid345_0919 1161273 - 1163024 + | ASPIC/UnbV Acid345_0920 1164839 - 1163025 - | ASPIC/UnbV TERM 878 1165078 - 1165090 + G 83 -5.5 -5.02476 | overlap 1165079 AATGGGCATGAATGG TGGCA GCA TGCCG TTTTTTACGAGGTCT Acid345_0921 1164973 - 1166679 + | alpha amylase TERM 879 1166718 - 1166698 - T 100 -14 -4.54727 | opp_overlap 1166698 TTCTGCAAACGAAAA TGCGGCGC GTTCA GCGCCGCA TTTCTTATTGATGGC TERM 880 1166698 - 1166718 + T 100 -14 -4.48713 | opp_overlap 1166698 TTCTGCAAACGAAAA TGCGGCGC GTTCA GCGCCGCA TTTCTTATTGATGGC Acid345_0922 1168374 - 1166740 - | Alpha,alpha-trehalase Acid345_0923 1169193 - 1168453 - | high-affinity nickel-transporter Acid345_0924 1169914 - 1169231 - | hydrogenase accessory protein HypB TERM 881 1169582 - 1169568 - G 73 -3.5 -4.84918 | TCCACAAACAGAAAA TCCAG CTCAT CCGGA TTCCACCCCTCCAGC Acid345_0925 1170255 - 1169911 - | hydrogenase expression/synthesis, HypA Acid345_0926 1172477 - 1170255 - | (NiFe) hydrogenase maturation protein HypF TERM 882 1172466 - 1172452 - G 75 -9.2 -3.88766 | AGCCGATACACGAAA GGCCGG AAC CCGACC CCCTGTACCACCCCA Acid345_0927 1172838 - 1173689 + | hypothetical protein TERM 883 1175247 - 1175228 - g 78 -9.2 -4.0777 | overlap 1175231 AGAGAAATATAAGAA CGACGTGG ATTA CCGCGTCG AAGCCCGCGTCACCG TERM 884 1175277 - 1175231 - g 85 -15 -3.05036 | overlap 1175228 GAAATATAAGAACGA CGTGGATTACCGCGTCGAAGCC CGC GTCACCGACGCGGCAAACCGCG AAATCCCTGGCCACA TERM 885 1177017 - 1176985 - g 79 -13.5 -3.02461 | TAATCGTCGCCAAGA CGCTCAAGGACCTGA ACA TCAAGTCCTCGATCG AGCCCAGTCGTCTCC TERM 886 1177416 - 1177397 - g 83 -9.2 -4.36595 | CATGCAAATCGAAAA CGACGCTC GCGT GAGCGACG CCGCCAACTCGCTCA Acid345_0928 1173690 - 1178369 + | alpha-2-macroglobulin-like Acid345_0930 1180777 - 1179071 - | sporulation protein and related proteins Acid345_0929 1178369 - 1179139 + | hypothetical protein TERM 887 1179191 - 1179167 - GT 85 -12.8 -3.53444 | opp_overlap 1179168, overlap 1179168 GTACTGCTTGGCAAA CGCGGCGACC CTCGT GGTCGCCGCT TCATAGGCTCGCCGC TERM 888 1179190 - 1179168 - GT 90 -16.3 -2.71924 | opp_overlap 1179168, overlap 1179167 TACTGCTTGGCAAAC GCGGCGACC CTCGT GGTCGCCGC TTCATAGGCTCGCCG TERM 889 1179168 - 1179190 + gT 100 -16.3 -3.16564 | opp_overlap 1179168 1179167 TACTGCTTGGCAAAC GCGGCGACC CTCGT GGTCGCCGC TTCATAGGCTCGCCG Acid345_0931 1181688 - 1180774 - | penicillin-binding protein, transpeptidase TERM 890 1180987 - 1181019 + g 74 -13.3 -2.52464 | overlap 1180975 GCTCGGCTGCGCTCC CTGCGCGAGTCCGTG TTC CACGGCCGCGCGCAA TCCGTTCAGCACCAC Acid345_0932 1183665 - 1181770 - | hypothetical protein Acid345_0933 1187261 - 1183677 - | Cna B-type protein TERM 891 1183818 - 1183782 - G 71 -10.1 -3.53761 | opp_overlap 1183813 GAACGGCGTTGCAAA GCGCACCGAGTTCGTGA AGT TGAAGAACTCCGCGCGC AACTCGAGCTTCATG TERM 892 1187289 - 1187320 + H 85 -6.8 -4.90869 | gap 1, opp_overlap 1187300 CAAACAATGACACTG GCTTTCAAAACGTTT CGT AAAC-TTTCGAAAGC TTTTTACTTCATCCT Acid345_0934 1187429 - 1188829 + | pyridoxal-dependent decarboxylase Acid345_0935 1191327 - 1188841 - | PAS/PAC sensor hybrid histidine kinase TERM 893 1189243 - 1189256 + g 75 -3.7 -4.7254 | overlap 1189244 TCGTGCCACTGCCGT TCGGG TGTC CCCGC TTTTTCCTGCGCCGT TERM 894 1190157 - 1190187 + g 77 -11.8 -3.53224 | overlap 1190152 1190160 GCTGTCCATGCGTTC GCAGATCGCGGAGC GTC GCTTCGCGCTCTAC TTTACCGCCGGCATA TERM 895 1190160 - 1190184 + g 71 -12.1 -2.90496 | overlap 1190152 1190157 GTCCATGCGTTCGCA GATCGCGGAGC GTC GCTTCGCGCTC TACTTTACCGCCGGC TERM 896 1191681 - 1191721 + G 71 -12.5 -2.64933 | opp_overlap 1191669 1191681 1191684 GAACATTCTGGAGAA CGAGCGCAGCGGATTCCAC CTC GTGCGATTCGCCGCGCTGG TGCTGTGCCTGCCTG Acid345_0936 1191601 - 1193748 + | TonB-dependent receptor Acid345_0937 1193775 - 1194383 + | hypothetical protein Acid345_0938 1194386 - 1195846 + | periplasmic sensor signal transduction histidine kinase TERM 897 1196292 - 1196271 - g 72 -6.5 -4.4009 | gap 1, overlap 1196275 GCGTAGTTCACAAAA GCGAGGGCGC AAT GCGCC-TGGC CACCACCATCCTTCA Acid345_0939 1195922 - 1196329 + | response regulator receiver protein Acid345_0940 1196988 - 1196737 - | hypothetical protein Acid345_0941 1197457 - 1199832 + | hypothetical protein TERM 898 1199886 - 1199863 - T 100 -16.8 -5.27335 | TGGGCCAAAGAAAAA CGGGATGGAC GAGA GTCCATCCCG CAAGTTACCGCAACC Acid345_0942 1201305 - 1199905 - | glutamate dehydrogenase Acid345_0943 1201737 - 1201396 - | hypothetical protein Acid345_0944 1202075 - 1204549 + | glycoside hydrolase/PKD Acid345_0945 1205251 - 1204559 - | hypothetical protein Acid345_0946 1206358 - 1205483 - | hypothetical protein TERM 899 1205792 - 1205808 + g 74 -7.9 -4.20918 | overlap 1205788 GACCTTGATTTCGGC GTCGCGG TAT TCGCGGC TTTCTTCCACTTCGC Acid345_0947 1207031 - 1206444 - | hypothetical protein TERM 900 1206627 - 1206613 - G 79 -5.6 -4.82901 | opp_overlap 1206612 GTGTCGCCATAAAAA CGAACG GTG CGGTCG GTGTCGTCCTGAATC TERM 901 1206925 - 1206900 - G 90 -10.5 -4.60889 | opp_overlap 1206921 AATGATGGCGAAAAA TGAGGGCAG CGTTTGGC CTGCCCTCA AACAGTTCGAGGTTG TERM 902 1207249 - 1207235 - g 76 -12.8 -3.09516 | opp_overlap 1207225 TGCGGTACTACCCAA CCGCCG CCG CGGCGG AAGAGGCAGGATTTC Acid345_0948 1207078 - 1208511 + | DNA-3-methyladenine glycosylase II / transcriptional regulator Ada / DNA-O6-methylguanine--protein-cysteine S-methyltransferase TERM 903 1208916 - 1208897 - g 76 -2.8 -5.00616 | overlap 1208899 GGCGCTGCGAAAAAA GATTGAGA ACTG TCCCAAAC TCGTCGATTACCACA Acid345_0949 1208823 - 1209284 + | hypothetical protein TERM 904 1210407 - 1210383 - g 87 -9.3 -4.59773 | opp_overlap 1210382 GGCGACGGCGAAAAA CGGAACCATCT CGA AGATCGTCCCG ATGTTGAAGCCCGGC Acid345_0950 1209295 - 1210626 + | acetyl-CoA hydrolase/transferase TERM 905 1210870 - 1210887 + G 72 -9.8 -3.7456 | opp_overlap 1210869 1210882, overlap 1210868 TTACAGACACACCAT GCCGGC AAAACA GCCGGC TCTTTCTTCGTCTGG Acid345_0951 1210649 - 1210939 + | 4Fe-4S ferredoxin, iron-sulfur binding Acid345_0952 1210923 - 1211975 + | ketoisovalerate ferredoxin oxidoreductase, alpha subunit Acid345_0953 1211989 - 1213440 + | thiamine pyrophosphate enzyme-like TPP-binding TERM 906 1213456 - 1213481 + F 100 -11.8 -5.07486 | CTTTTCCCTTCGAAC GGCGGTGGGC CTTCGT GCCTGCCGCC TTTTTGTTAAAACTC Acid345_0954 1213617 - 1214696 + | hypothetical protein Acid345_0955 1215131 - 1214697 - | hypothetical protein Acid345_0956 1215724 - 1215128 - | hypothetical protein Acid345_0957 1216410 - 1215721 - | hypothetical protein Acid345_0958 1217047 - 1216679 - | hypothetical protein Acid345_0959 1218195 - 1217050 - | serine phosphatase TERM 907 1218302 - 1218339 + H 85 -9.1 -4.4078 | gap 1 CGCGCGATGATTGGC TTAGCAGCGGACCC-ATG CAG CATCGGGACCGCGGCGAA TTTTCATTGGCGACA Acid345_0960 1218366 - 1218686 + | hypothetical protein TERM 908 1218693 - 1218721 + T 95 -14.5 -3.28497 | opp_overlap 1218691, overlap 1218687 ATGCCTTAAGCTATC CGGCCGCGACGGC GAC GCTGTTGCGGCCC TTCGCTTTCGCCTCG Acid345_0961 1220085 - 1218688 - | diguanylate cyclase with PAS/PAC sensor TERM 909 1221020 - 1221032 + G 70 -4.8 -4.48299 | opp_overlap 1221016, overlap 1221016 ATCCACTCAAAGAGA CCAG CGGCT CTGG TTTCTTTACCTATGC Acid345_0962 1220176 - 1221285 + | glycosy hydrolase family protein TERM 910 1221794 - 1221772 - g 74 -7.6 -4.20696 | GGATGAAGTGCAAAA TCCAGCGGCG CCG CTGCGCTGGA TCAACCAATGGGACA TERM 911 1222257 - 1222289 + G 81 -4 -5.05782 | gap 1, overlap 1222258 1222273 1222284 ATGCTGCCAACGTCA TCGCGCGCGCGCTGC GGCC GCATCACG-GCGTGG TTTTTTACCGTGCGT TERM 912 1223069 - 1223083 + G 70 -4.2 -4.57341 | overlap 1223053 1223065 GCGGCGGCCACGCCC GACGAG CTT CTCCTC TTTTTCCACCACGTT Acid345_0963 1221290 - 1223770 + | Alpha-glucosiduronase TERM 913 1224680 - 1224635 - g 83 -4.6 -5.07652 | opp_overlap 1224647, overlap 1224636 CCGGCCAAAAGAAAA GGGCGCCGCAGATGCCGG-GGC CACA GCCGCCGACATCCTCT-CGGCC TACCAGCAGATCATC Acid345_0964 1223760 - 1224983 + | lipolytic enzyme, G-D-S-L Acid345_0965 1225107 - 1225955 + | hypothetical protein Acid345_0966 1226127 - 1227017 + | phenazine biosynthesis PhzC/PhzF protein TERM 914 1227001 - 1227011 + F 70 -6.8 -4.07568 | overlap 1226993 1226992 TGAAGGTGTCGGACG CGAC CTT GTCG TTTTAGGACCCAACA TERM 915 1227193 - 1227170 - f 73 -8.8 -3.84451 | CTGGTGAAAGTGAAA CGGCGGACCT GCTC AAGTCCGTCG CGCAGTGTGCCCTGG Acid345_0967 1227209 - 1227646 + | response regulator receiver protein TERM 916 1227687 - 1227669 - f 87 -8.1 -4.65916 | gap 1, opp_overlap 1227670 1227671, overlap 1227671 TTCATTCGAATAAAA GACCGGCC TGCG GGCCGG-C TTTTCTTTGTTTCGA TERM 917 1227670 - 1227687 + F 100 -8.3 -5.18866 | opp_overlap 1227669 1227671, overlap 1227671 TCATTCGAATAAAAG ACCGGCC TGCG GGCCGGC TTTTCTTTGTTTCGA TERM 918 1227671 - 1227686 + F 83 -11.8 -3.69693 | opp_overlap 1227671 1227669, overlap 1227670 CATTCGAATAAAAGA CCGGCC TGCG GGCCGG CTTTTCTTTGTTTCG TERM 919 1227686 - 1227671 - f 90 -11.8 -3.94438 | opp_overlap 1227670 1227671, overlap 1227669 CATTCGAATAAAAGA CCGGCC TGCG GGCCGG CTTTTCTTTGTTTCG TERM 920 1227715 - 1227725 + F 74 -6.8 -4.22652 | opp_overlap 1227714 CGAAAAGCAGCAACT CACC TCA GGTG TTTTCCCTACTATCC Acid345_0968 1228049 - 1228300 + | hypothetical protein Acid345_0969 1228389 - 1229360 + | hypothetical protein TERM 921 1229405 - 1229385 - f 89 -13.3 -3.68244 | opp_overlap 1229385 AGCACGAAGTGGAAA GGCATGGCC GCG AGCCATGCC TTTTTCGTCACCGCG TERM 922 1229385 - 1229405 + F 100 -12.6 -4.72272 | opp_overlap 1229385 AGCACGAAGTGGAAA GGCATGGC CGCGA GCCATGCC TTTTTCGTCACCGCG Acid345_0970 1229516 - 1230238 + | ABC transporter, ATPase subunit Acid345_0971 1232248 - 1230248 - | amidohydrolase 3 TERM 923 1230350 - 1230382 + g 80 -9.7 -4.14392 | GTGAATGTCGGCGAG CGGGTCGGCGTTCAG CAG CAGAACGTCGCCGCG TTTTCCGGCTTCCAG TERM 924 1232447 - 1232429 - R 100 -13.1 -4.61566 | CGCCAAATGACAAAA GGCGGCC GACTA GGCCGCC CATTGCGATGGTGCA Acid345_0972 1233155 - 1232472 - | two component LuxR family transcriptional regulator Acid345_0973 1234926 - 1233148 - | putative signal transduction histidine kinase TERM 925 1234604 - 1234594 - G 91 -6.8 -5.1925 | GTACAAGGTAAAAAA CGGA CTG TCCG CGCCATCGGTATAAA Acid345_0974 1235283 - 1235702 + | hypothetical protein TERM 926 1235726 - 1235745 + T 100 -11.4 -5.42198 | opp_overlap 1235726 ACGCTGTGCACGAAA GGCGGGAC TACG GTCTCGCC TTTTCTTTTTTGCGC TERM 927 1235745 - 1235726 - T 70 -9.2 -3.72695 | opp_overlap 1235726 ACGCTGTGCACGAAA GGCGGGAC TACG GTCTCGCC TTTTCTTTTTTGCGC Acid345_0975 1236309 - 1235917 - | MerR family transcriptional regulator TERM 928 1236376 - 1236355 - R 100 -15.1 -4.54727 | GCGTCCAAAGTAAAA GGCCGGAGC ACCT GCCCCGGCC CAAGAAGTACGAAGA Acid345_0976 1237805 - 1236393 - | amino acid transporter TERM 929 1237877 - 1237858 - H 75 -3.6 -4.83615 | overlap 1237866 GATCCGGGACAAAAA GAATACAA GGAA TTGGATTC CGAACGCTAAGAAAA Acid345_0977 1238052 - 1238342 + | hypothetical protein Acid345_0978 1238468 - 1238863 + | hypothetical protein TERM 930 1238925 - 1238952 + T 95 -5.5 -5.42259 | opp_overlap 1238930, overlap 1238930 CAGACTAGGGAAATC CAAAAGGCCGG CGCACA CCGGCCTTTAC TTTTTTTAAAGCTAA TERM 931 1238947 - 1238930 - T 90 -10.5 -4.36595 | opp_overlap 1238930 1238925 TAGGGAAATCCAAAA GGCCGGC GCAC ACCGGCC TTTACTTTTTTTAAA TERM 932 1238930 - 1238947 + T 88 -9.8 -4.5187 | opp_overlap 1238930, overlap 1238925 TAGGGAAATCCAAAA GGCCGG CGCACA CCGGCC TTTACTTTTTTTAAA Acid345_0979 1240261 - 1239056 - | chaperone DnaJ-like TERM 933 1239203 - 1239217 + g 70 -4.2 -4.56597 | overlap 1239191 1239204 CTTCGTTCCGTCGGC AGCGTT CGG AACGCC TTTTTCGCGCAGCCG Acid345_0980 1241695 - 1240421 - | hypothetical protein Acid345_0981 1242740 - 1241913 - | hypothetical protein TERM 934 1242865 - 1242833 - R 95 -14.1 -3.66803 | opp_overlap 1242831 GCCCAATATTCGAAA GGGAGCAGACGGCGA ATA TCTCAGCCTGCTCCC AATTCGTCAAAACAC Acid345_0982 1244834 - 1242900 - | chaperone DnaK Acid345_0983 1245283 - 1248042 + | peptidase M48, Ste24p Acid345_0984 1248416 - 1250869 + | ABC efflux pump, inner membrane subunit Acid345_0985 1250915 - 1251814 + | DNA-(apurinic or apyrimidinic site) lyase / formamidopyrimidine-DNA glycosylase Acid345_0986 1252323 - 1251811 - | hypothetical protein Acid345_0987 1252802 - 1252320 - | MerR family transcriptional regulator TERM 935 1253878 - 1253848 - g 78 -6 -4.64861 | CCTGCGCAAAACAAA CTTCGTCCTGCTGC ACG GCAATTGGACGCAG GAACGCAAAGTCATC Acid345_0988 1252916 - 1254214 + | amidohydrolase 2 Acid345_0989 1255231 - 1254218 - | hypothetical protein TERM 936 1255826 - 1255837 + G 75 -5.8 -4.62203 | GTACAGCCTGATCCA TCGC GATC GCGA TTTTGATTGTTTCGA Acid345_0990 1255491 - 1255886 + | PilT protein-like Acid345_0991 1257453 - 1255894 - | hypothetical protein TERM 937 1257290 - 1257280 - G 87 -8.2 -4.82901 | GCTCTTGGAGAAAAA GCGG TGC CCGC CGATGTCCATGCGGT Acid345_0992 1258363 - 1257626 - | oxidoreductase FAD/NAD(P)-binding Acid345_0993 1258866 - 1258480 - | PilT protein-like Acid345_0994 1259111 - 1258863 - | prevent-host-death protein Acid345_0995 1260346 - 1259183 - | aminopeptidase DmpA Acid345_0996 1261033 - 1260374 - | HAD family hydrolase Acid345_0997 1262902 - 1261040 - | glutamine--fructose-6-phosphate transaminase Acid345_0998 1263203 - 1262961 - | phosphoribosylformylglycinamidine synthetase PurS Acid345_0999 1263249 - 1264352 + | beta-lactamase Acid345_1000 1264794 - 1264333 - | hypothetical protein TERM 938 1264438 - 1264418 - G 75 -9.6 -3.92075 | ATCGGCAGGTAGAAA CGGCGCGG GCCGG CGGCGCCG GGATTGAAGAACAGC TERM 939 1264765 - 1264743 - G 73 -12 -3.05769 | opp_overlap 1264764, overlap 1264736 CCTCTAAAGCAGAGA CGGCCTGC GGACGAA GCAGGCCG TGCGTATCCGAGATG Acid345_1001 1265579 - 1264791 - | LytR/AlgR family transcriptional regulator TERM 940 1265348 - 1265373 + g 82 -6.7 -4.72272 | CAAAGATCACCTGCG GCATCGCGACC TTAC GGTCGAGGAGC TTTTTGATGACGCCA TERM 941 1265751 - 1265732 - H 73 -10.6 -3.32963 | ATTGCGAGCGTAGAA CGCGCAGC GTTC GCAGCGCG GCAATCCCGAGGATG Acid345_1002 1265927 - 1266274 + | hypothetical protein Acid345_1003 1266321 - 1267106 + | RNA methyltransferase TrmH, group 3 Acid345_1004 1267247 - 1268932 + | hypothetical protein TERM 942 1269117 - 1269141 + F 84 -6.4 -5.11112 | gap 1 CGCCGAGAGATTCGA GGGCG-ACATC GAGA GATGAGCGCCC TTTTTGTTGCACTTT TERM 943 1269334 - 1269358 + F 91 -10 -4.67038 | gap 1 CGCTGAAAGTTTTGA GGGCG-CCGTC GAGA GACGGGTGCCC TTTTCGTTTTGGCGG Acid345_1005 1269414 - 1270121 + | hypothetical protein TERM 944 1270625 - 1270611 - g 71 -7.8 -4.07568 | opp_overlap 1270613, overlap 1270612 CCGCGGGGCGCAAAA CGTCGC GGT GCGACA CGGGGATGTGGTGGT Acid345_1006 1270108 - 1270752 + | DNA-N1-methyladenine dioxygenase Acid345_1007 1271077 - 1272033 + | putative sulfite oxidase subunit YedY Acid345_1008 1272033 - 1272647 + | ferric reductase-like transmembrane subunit TERM 945 1273076 - 1273091 + T 100 -11.8 -5.07652 | GGCAAGTACCGTGCC GCCCGC TAAA GCGGGC TTTTATTTTGGGCGG Acid345_1009 1273587 - 1273366 - | hypothetical protein Acid345_1010 1273664 - 1274662 + | Alpha/beta hydrolase Acid345_1011 1274662 - 1275192 + | hypothetical protein Acid345_1012 1276647 - 1275367 - | hypothetical protein TERM 946 1275392 - 1275414 + g 95 -11.2 -4.77757 | GAGGAAGTGGTTTGG GCTGCGCTCT GTG GGGGCGCGGC TTTTAGTTTTTGCAG Acid345_1013 1276813 - 1276661 - | hypothetical protein TERM 947 1276968 - 1276983 + r 74 -6.8 -4.34482 | overlap 1276972 TATTAGTCGAGGGGT TCGGCG TCGA TGCCGA TGTTTTTTTCGCCGG TERM 948 1276972 - 1276985 + r 90 -4.5 -5.40072 | overlap 1276968 AGTCGAGGGGTTCGG CGTCG ATGC CGATG TTTTTTTCGCCGGCG Acid345_1014 1277365 - 1276955 - | hypothetical protein TERM 949 1277318 - 1277329 + g 74 -2.2 -4.87626 | overlap 1277326 CTCGAGGTTTTCGTG CTTG AATC CGAG TTTTTCGTCTTCGCC TERM 950 1277375 - 1277388 + r 100 -9.5 -5.14626 | GTGCATGGTGCCTCA GGGGC TAAA GCCCC TTTTCTTTTCGTACT Acid345_1015 1278787 - 1277687 - | radical SAM family Fe-S protein TERM 951 1279082 - 1279099 + r 70 -9.9 -3.32963 | overlap 1279076 TTCTTCGACTGCGAA TCCGCAT TGGT ATGCGGA TTCTCCGCTCAGAAT Acid345_1016 1279817 - 1279125 - | hypothetical protein Acid345_1017 1279915 - 1281051 + | cell surface receptor IPT/TIG Acid345_1018 1281067 - 1283010 + | hypothetical protein TERM 952 1283031 - 1283062 + T 72 -12.3 -2.60075 | opp_overlap 1283032 1283035 1283037, overlap 1283037 AAGTAGTGCGATCGA ACAAGAGGCGCGC TGATCT GCGCGCCTTTTGC GTTGATTGGGAAGAA TERM 953 1283061 - 1283032 - T 84 -13.6 -3.06302 | opp_overlap 1283031 1283037, overlap 1283035 1283037 AGTAGTGCGATCGAA CAAGAGGCGCGC TGATCT GCGCGCCTTTTG CGTTGATTGGGAAGA TERM 954 1283058 - 1283035 - T 74 -9.5 -3.67775 | opp_overlap 1283031 1283037, overlap 1283032 1283037 AGTGCGATCGAACAA GAGGCGCGC TGATCT GCGCGCCTT TTGCGTTGATTGGGA TERM 955 1283037 - 1283056 + T 93 -12.1 -4.32201 | opp_overlap 1283035 1283032 1283037, overlap 1283031 TGCGATCGAACAAGA GGCGCGC TGATCT GCGCGCC TTTTGCGTTGATTGG TERM 956 1283056 - 1283037 - T 80 -12.1 -3.41988 | opp_overlap 1283037 1283031, overlap 1283035 1283032 TGCGATCGAACAAGA GGCGCGC TGATCT GCGCGCC TTTTGCGTTGATTGG TERM 957 1283145 - 1283124 - T 100 -18.7 -4.55023 | overlap 1283119 TGGAAGACGAGAAAA GCCCCCGGG CGTC CCCGGGGGC GAAGTTGCAGCGACG Acid345_1019 1284993 - 1283161 - | amidase TERM 958 1285165 - 1285145 - R 79 -11.1 -3.68023 | overlap 1285141 1285146 AATTGTCAAAATTAA TGGGCACCT CAA AGGTGCCCG TGCAGGGACAAGTCG TERM 959 1285164 - 1285146 - R 83 -14.6 -2.80091 | overlap 1285145 1285141 ATTGTCAAAATTAAT GGGCACCT CAA AGGTGCCC GTGCAGGGACAAGTC Acid345_1020 1286444 - 1285191 - | glucose-1-phosphate adenylyltransferase TERM 960 1286411 - 1286396 - G 80 -10.4 -4.0162 | GGGTTAGAGGATAAA GGCGCT CACC AGCGCC GCCGGCCAGGAGTAC Acid345_1021 1286914 - 1286621 - | hypothetical protein TERM 961 1286738 - 1286756 + g 73 -3.1 -4.72272 | overlap 1286739 GGGGCCGAGTTTCTC AGAAGAC TGTTC GTCTTCG TTTTTGCTGAAGCCG TERM 962 1287000 - 1287019 + H 74 -2.1 -5.10461 | AAAGAAGGTTTTGGT TGTACCA GAGTAG TGGGACA TTTTTGTTGGCTAAG Acid345_1022 1287061 - 1287405 + | hypothetical protein TERM 963 1287904 - 1287916 + G 73 -3.3 -4.85396 | opp_overlap 1287904, overlap 1287887 1287905 1287911 TCGATGACGATCAAC TCGAC GGC GACGA TTTTGTTGTCGTTGT Acid345_1023 1287451 - 1289079 + | methylmalonyl-CoA mutase TERM 964 1289231 - 1289206 - T 100 -6 -5.54894 | opp_overlap 1289209, overlap 1289207 1289209 AACCTAGGAAAAAAA GGAGCGCGGC TTTCGG GCCGCGCTTT ATTTGCTGCATGCGG TERM 965 1289230 - 1289207 - T 76 -9.5 -3.9131 | opp_overlap 1289209, overlap 1289206 1289209 ACCTAGGAAAAAAAG GAGCGCGGC TTTCGG GCCGCGCTT TATTTGCTGCATGCG TERM 966 1289209 - 1289228 + T 100 -12.8 -4.50627 | opp_overlap 1289207 1289206 1289209 CTAGGAAAAAAAGGA GCGCGGCT TTCG GGCCGCGC TTTATTTGCTGCATG TERM 967 1289228 - 1289209 - T 81 -12.1 -3.53247 | opp_overlap 1289209, overlap 1289207 1289206 CTAGGAAAAAAAGGA GCGCGGC TTTCGG GCCGCGC TTTATTTGCTGCATG Acid345_1024 1289683 - 1289306 - | hypothetical protein Acid345_1025 1290912 - 1289770 - | UDP-N-acetylglucosamine 2-epimerase Acid345_1026 1291559 - 1291020 - | hypothetical protein TERM 968 1291091 - 1291073 - G 71 -13.2 -2.69406 | opp_overlap 1291068 1291064, overlap 1291070 1291075 CGACACACCAGAGGA GAGCGTCT TCG AGACGCTC GCGGCTGCCTTCATC Acid345_1027 1291759 - 1292361 + | ECF subfamily RNA polymerase sigma-24 factor Acid345_1028 1292396 - 1293103 + | putative transmembrane transcriptional regulator Acid345_1029 1293148 - 1293897 + | hypothetical protein Acid345_1030 1293907 - 1294224 + | hypothetical protein TERM 969 1294807 - 1294774 - g 75 -8.7 -4.08557 | TGCGTCAAACAACAA CGCGAAGCCGACGAT CGAG ATCAACGGCGGCGCG GTGGTGGTCAACGCG Acid345_1031 1294217 - 1295605 + | hypothetical protein TERM 970 1295631 - 1295650 + T 100 -16.4 -5.35815 | opp_overlap 1295626 CTCCCCAATAGGTAG GGCCGGGC ATTT GCCCGGCC TTTTTATTTGGTGTG Acid345_1032 1296460 - 1295672 - | hypothetical protein TERM 971 1296645 - 1296597 - H 100 -13.2 -4.18197 | gap 2, opp_overlap 1296576 1296595, overlap 1296576 AGGGCGGAGGCAAAA CCAACGTG-CCCGCCC-TGTCCGC TTT GCGGATAAGGACGGGGCACCCTGG GGATTATGCTGCGGG TERM 972 1298406 - 1298416 + G 75 -5.4 -4.57341 | opp_overlap 1298398 CAAAGAGCGCGCTTA CTTC CGC GAAG TTTTTGGCAGGGATT Acid345_1033 1296934 - 1298451 + | Ppx/GppA phosphatase Acid345_1034 1298933 - 1298403 - | phosphohistidine phosphatase, SixA Acid345_1035 1301081 - 1298940 - | polyphosphate kinase Acid345_1036 1301347 - 1302897 + | hypothetical protein TERM 973 1302989 - 1302957 - T 74 -7.8 -4.07568 | gap 2, overlap 1302960 TTTGGGCTTCTAAAA TCAGCACCCCGGCG TCTTAAG CGCCGGGGTG--GA TCGGTGGGAAGCTGG TERM 974 1302988 - 1302960 - T 81 -13.1 -3.08032 | overlap 1302957 GGGCTTCTAAAATCA GCACCCCGGCG TCTTAAG CGCCGGGGTGG ATCGGTGGGAAGCTG Acid345_1037 1303834 - 1303058 - | hypothetical protein Acid345_1038 1306046 - 1303989 - | glycosyl transferase family protein TERM 975 1305699 - 1305681 - G 84 -7.4 -4.83615 | GAGGGCGGAGAAAAA GCTGTTGA AGG TCAGCAGC GCGAAGGACGCGGAG Acid345_1039 1306272 - 1306526 + | 4Fe-4S ferredoxin, iron-sulfur binding TERM 976 1306551 - 1306580 + T 91 -10 -4.63218 | gap 1, opp_overlap 1306555, overlap 1306552 ATCCTAACGTTCCTA ATGA-GCCCGCGG CGCGT CCGCGGGCATCAC TTTTGTTACGCGCCA TERM 977 1306552 - 1306579 + T 88 -13.5 -3.3761 | gap 1, opp_overlap 1306555, overlap 1306551 TCCTAACGTTCCTAA TGA-GCCCGCGG CGCGT CCGCGGGCATCA CTTTTGTTACGCGCC TERM 978 1306575 - 1306555 - T 83 -15.4 -2.71681 | opp_overlap 1306552 1306551 TAACGTTCCTAATGA GCCCGCGG CGCGT CCGCGGGC ATCACTTTTGTTACG Acid345_1040 1307599 - 1306586 - | peptidase dimerisation Acid345_1041 1307646 - 1307885 + | hypothetical protein TERM 979 1308236 - 1308252 + G 78 -2.9 -5.08255 | ACGAATTTTCGTTGC CCCTG ATCTTTG CGGGG TTTTCTTTTGGCGCT Acid345_1042 1307905 - 1308588 + | hypothetical protein Acid345_1043 1308627 - 1309973 + | hydroxypyruvate reductase Acid345_1044 1310867 - 1309977 - | hypothetical protein TERM 980 1310826 - 1310840 + g 78 -8.6 -4.1711 | overlap 1310822 GTGCCGCACGAGTTT GCCAAA CTG TTTGGC TTTCTTGCGGATAGT Acid345_1045 1311115 - 1311873 + | hemolysin A TERM 981 1312333 - 1312322 - g 79 -7.2 -4.63218 | TTGTGGTGAACAAAA GCGC TATC GCGC GACTGGTCGGATTCG Acid345_1046 1311877 - 1312734 + | NAD(+) kinase TERM 982 1312738 - 1312756 + T 100 -14.6 -3.99062 | opp_overlap 1312738 GAACGCGAATGAAAA GAGCGGTG CCC CACCGCTC TTTCTCGTGAATATT TERM 983 1312756 - 1312738 - T 100 -14.6 -4.43309 | opp_overlap 1312738 GAACGCGAATGAAAA GAGCGGTG CCC CACCGCTC TTTCTCGTGAATATT Acid345_1047 1313333 - 1312779 - | hypothetical protein Acid345_1048 1313475 - 1315148 + | urocanate hydratase TERM 984 1315157 - 1315183 + F 95 -13 -4.12532 | ACAGTAGTTTCATTC GGCACGGCGG CGATGAA CTGCCGTGCC TTTCTCTATGCCAAA Acid345_1049 1315191 - 1316480 + | imidazolonepropionase Acid345_1050 1316549 - 1319182 + | peptidase M1, membrane alanine aminopeptidase TERM 985 1319193 - 1319214 + F 71 -10.8 -3.21912 | opp_overlap 1319187 ACTAGAAATCGGCGG CGGGTCGG CCTTCA CCGGCCCG TTGGTCGGTTCCGCC TERM 986 1319864 - 1319875 + G 72 -4.4 -4.56597 | opp_overlap 1319851 GATCGCGCTGGCTCA TCCA CGTT TGGA TTTTTCCGCGCGACG Acid345_1051 1319796 - 1320479 + | hypothetical protein Acid345_1052 1320555 - 1322951 + | TPR repeat-containing serine/threonin protein kinase TERM 987 1323083 - 1323102 + G 72 -9.2 -3.73873 | CGTACGAAGTACCAT GGTTGCCG CTCT CGGCGGCC TTCTCTTCGGTTTCG Acid345_1053 1323081 - 1324373 + | sugar transporter TERM 988 1325063 - 1325051 - g 72 -9.1 -3.89354 | CTCGTAAATCAAGAA GCTCG AGA CGAGC ATCCCGGCTATCCCG TERM 989 1325234 - 1325209 - g 76 -12.5 -3.14132 | opp_overlap 1325208 1325204 CTGGGTCGCGAGCAA GCCCGGCGCCA CACC TGCCGCCGAGC CTGAATTCATTGACG Acid345_1054 1324370 - 1325272 + | ribokinase family sugar kinase Acid345_1055 1325272 - 1325610 + | hypothetical protein Acid345_1056 1325726 - 1325983 + | hypothetical protein Acid345_1057 1326013 - 1326450 + | type IV pilus assembly PilZ Acid345_1058 1326998 - 1328014 + | KpsF/GutQ family protein Acid345_1059 1328014 - 1328472 + | hypothetical protein Acid345_1060 1328679 - 1329050 + | hypothetical protein Acid345_1061 1329072 - 1329281 + | hypothetical protein TERM 990 1329290 - 1329306 + T 72 -2.2 -4.89477 | GAAGTAAGTTGGTTA GCGC TTTTTCGCT GCGC TTTTCTTCTTCGCCG Acid345_1062 1329658 - 1329287 - | methylated-DNA-(protein)-cysteine S-methyltransferase TERM 991 1330376 - 1330401 + G 76 -13.3 -2.71731 | opp_overlap 1330375 1330371 1330400 GTCTCAGGAATTCAT GGTCTACACCG ACGC CGGTGAAGACC TCGTTGCGAGCTGCG Acid345_1063 1329744 - 1331507 + | prolyl-tRNA synthetase Acid345_1064 1331544 - 1331888 + | hypothetical protein TERM 992 1331912 - 1331935 + F 89 -13.9 -3.76125 | opp_overlap 1331909 ATTGTTGCAAATTGT CAGGGTCCC CAATTT GGGACCCTG TTTGCCTTACAATAG TERM 993 1332071 - 1332057 - f 70 -3.4 -4.68384 | overlap 1332058 AGCTAGGTAACAAAA CGACGC CGA ACGACG TCTCAATAAGAACGG TERM 994 1334670 - 1334655 - g 90 -6.2 -5.22006 | GGATCAGAACAAAAA GAAGAA GGGA TTCTTC GGCAAGATTGCAGGG Acid345_1065 1332103 - 1334775 + | penicillin-binding protein 1A TERM 995 1334987 - 1334999 + F 86 -10.5 -4.10744 | ACGAACCTGTGGATT CGCGC TTC GCGCG TTGTTGTTTGGGTCA TERM 996 1335649 - 1335674 + G 71 -7.5 -4.18494 | opp_overlap 1335652, overlap 1335652 CGGCGGTTGCCAATC GAACGATGACG GCGA CGGCATCGTGC TTTTCGATAAGGCTG Acid345_1066 1335134 - 1338715 + | hypothetical protein TERM 997 1338732 - 1338751 + F 100 -12.8 -6.06723 | CATTGTTCTCACGGA CCCGGGCG TTAT TGCCCGGG TTTTTTTTTGCAAAA TERM 998 1339312 - 1339284 - g 84 -7.3 -4.84359 | overlap 1339286 1339305 CGAGGCCCAGAAAAA GGCCACGCTCGAT TAC AACGAGCGCGAAC TGGAGCGCCAGAAGG Acid345_1067 1338934 - 1340028 + | secretion protein HlyD TERM 999 1342554 - 1342540 - g 72 -5.6 -4.42806 | TCACGCTGAAAGAAA CCTCCG GCC CGCAGG TCATCAATCACTTCA Acid345_1068 1340088 - 1343267 + | hydrophobe/amphiphile efflux-1 HAE1 Acid345_1069 1343562 - 1344206 + | outer membrane protein TERM 1000 1344225 - 1344247 + F 100 -12.7 -4.63218 | opp_overlap 1344225 GGGCTGAAGGACGAA GGCGCAGCT TTAGC GGCTGCGCC TTTTCTTGCGCAAAA TERM 1001 1344247 - 1344225 - f 78 -12 -3.27298 | opp_overlap 1344225 GGGCTGAAGGACGAA GGCGCAGC TTTAGCG GCTGCGCC TTTTCTTGCGCAAAA TERM 1002 1345449 - 1345465 + G 82 -6.5 -4.83615 | opp_overlap 1345433 1345432, overlap 1345451 CGGCGACAAGATCCA GCTCGTC GGC GACGACC TTTTTGTCACCAATC Acid345_1070 1344523 - 1345824 + | enolase TERM 1003 1345848 - 1345866 + F 100 -13.8 -4.90217 | opp_overlap 1345846 1345845 AATAACAGAGAATTC GGCGGCCT TCG GGGCCGCC TTTTTGCTATATTTC Acid345_1071 1345904 - 1346497 + | hypothetical protein Acid345_1072 1346592 - 1347104 + | hypothetical protein TERM 1004 1347828 - 1347801 - g 76 -4.8 -4.84359 | gap 1, overlap 1347816 GGATCGCGACAAAAA GTGGGACCGCGAG AAG CTCGCT-TCCGAC GCGATGCTGCATGGC TERM 1005 1348093 - 1348068 - g 73 -11.7 -3.0682 | overlap 1348065 CGGAATCACAAAGGA CGGCGGCCGCG AGCT CGATGCCGCCG ACACTCTCGACGCGA Acid345_1073 1347220 - 1348836 + | phosphoglyceromutase TERM 1006 1348871 - 1348920 + G 77 -12.1 -3.57561 | opp_overlap 1348908, overlap 1348908 CACTCCCGCACCGGT TTCCGCTCTGGGATGCTCCGCCA TGGT TCGCGGAAAAGCTCAGGGCGGAA TTTCCCGGCTTGCGC TERM 1007 1349356 - 1349344 - g 70 -4.1 -4.61873 | GCGCAGAAAGCAAAA GCACT CGG AATGC ACGTGATCGCTGTTC Acid345_1074 1348840 - 1349823 + | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding Acid345_1075 1349823 - 1350377 + | metal-dependent hydrolase phhA 1351130 - 1350378 - | phenylalanine 4-monooxygenase TERM 1008 1351630 - 1351640 + G 71 -8.2 -4.07568 | overlap 1351629 CCTGGTGATGGCGAC CGCG CTG CGCG TTTTGCCAAAGACAA Acid345_1077 1351345 - 1352664 + | guanosine polyphosphate pyrophosphohydrolases/synthetases Acid345_1078 1352782 - 1354833 + | PgPepO oligopeptidase TERM 1009 1354883 - 1354863 - f 83 -12.6 -3.24747 | opp_overlap 1354863 TCGCGATATGACCAA CCGGCAGA GCTAA TCTGCCGG TTTTTCTTTCCCTGC TERM 1010 1354863 - 1354883 + F 100 -12.6 -5.30616 | opp_overlap 1354863 TCGCGATATGACCAA CCGGCAGA GCTAA TCTGCCGG TTTTTCTTTCCCTGC TERM 1011 1355485 - 1355459 - g 83 -9.4 -4.3129 | GACGCAGGATCAAAA GCGCGCAAGCTC GTG GAACTTGCGAAC AAGACTCAGCACACG Acid345_1079 1355156 - 1356178 + | oxidoreductase Acid345_1080 1356175 - 1356786 + | hexapaptide repeat-containing transferase TERM 1012 1357932 - 1357961 + G 74 -7.1 -4.35885 | gap 1, opp_overlap 1357927, overlap 1357928 GATCTACCAACCGGA GGCGCCGGTTCAGG CGT TC-GAACTCGCGCC TTTGTTATCCTGAAT Acid345_1081 1356802 - 1357974 + | DegT/DnrJ/EryC1/StrS aminotransferase Acid345_1082 1357979 - 1358551 + | translation elongation factor P TERM 1013 1358575 - 1358596 + T 100 -15.9 -4.32201 | opp_overlap 1358575 CGGGCAGTTTGAGAA TGGGACGGC AATA GCCGTCCCA TTTTGCATTAGTTCG TERM 1014 1358596 - 1358575 - T 100 -15.9 -3.31144 | opp_overlap 1358575 CGGGCAGTTTGAGAA TGGGACGGC AATA GCCGTCCCA TTTTGCATTAGTTCG Acid345_1083 1359125 - 1358604 - | DinB Acid345_1084 1359239 - 1359766 + | hypothetical protein TERM 1015 1359977 - 1359961 - T 80 -8.7 -4.19238 | TGTTGAACGGCAAAA CCCTTCA ACA CGAAGGG CACGAAGTACGCGAA TERM 1016 1360204 - 1360152 - T 74 -7.5 -4.10855 | overlap 1360179 AAAACCGCGTGAAAA TGCTCGACCACCCCAGCCAGCGCAA AAG CTGCGCTCGCCGGGGACCCCGAAGA AGCCGCACCGCCCCT Acid345_1085 1360718 - 1360299 - | hypothetical protein TERM 1017 1360427 - 1360454 + g 79 -5.6 -4.74518 | gap 1, opp_overlap 1360434, overlap 1360422 1360421 1360428 CAGTGGGTTTGCACC GGAGATA-GACGC GGT GCGTCTTCTCTTC TTTCTTTTCATCCTT TERM 1018 1360428 - 1360451 + g 88 -10.4 -4.45807 | gap 1, opp_overlap 1360434, overlap 1360422 1360421 1360427 AGTGGGTTTGCACCG GAGATAGACGC GGT GCGTCT-TCTC TTCTTTCTTTTCATC Acid345_1086 1362203 - 1360845 - | hypothetical protein TERM 1019 1361471 - 1361448 - G 72 -5.9 -4.4267 | overlap 1361449 CTGCAAAAGCGAAAA GGTCGCGGC GGGGAG ACCGCGACT CTGGCGCATCTGGTT Acid345_1087 1362603 - 1362944 + | PadR family transcriptional regulator TERM 1020 1363315 - 1363334 + G 71 -7.8 -4.08706 | opp_overlap 1363315, overlap 1363316 ACTCCGTCCCATCAA TGTTCCCG ACGC CGGGAACC TTTCTATGCTGGAGC TERM 1021 1364401 - 1364387 - g 74 -11.4 -3.58037 | TACGAAGTCGTGAAA GCCGGT TTC ACCGGC GAGCGTCGTAGACGC TERM 1022 1365415 - 1365428 + G 78 -9.5 -4.015 | ACTTGTTCTAGGATT CGCCG CAAC CGGCG TTCTTTCCTACGTGG Acid345_1088 1362941 - 1365583 + | ABC efflux pump, inner membrane subunit Acid345_1089 1367511 - 1365736 - | radical SAM family Fe-S protein TERM 1023 1367979 - 1367955 - R 90 -5.7 -5.14563 | opp_overlap 1367967, overlap 1367957 TGCGCGACGAAAAAA CAGCGAGAT TGTCGTG ATCTCGCGG GGACGGGATCGGGTA TERM 1024 1367977 - 1367957 - R 70 -6.9 -4.20707 | opp_overlap 1367967, overlap 1367955 CGCGACGAAAAAACA GCGAGAT TGTCGTG ATCTCGC GGGGACGGGATCGGG TERM 1025 1368017 - 1368040 + r 81 -12.5 -3.06183 | overlap 1368014 1368020 GGAGTCTTCGACTGC GAACCCGCA TTGGTC TGCGGGTTC TTCGCTCAGAATGAC Acid345_1090 1368572 - 1368078 - | hypothetical protein TERM 1026 1368968 - 1368954 - g 71 -10 -3.5782 | AATGCAGGAAATGAA TGCGCA CGG TGCGCA AGGATGGGAACTGGT Acid345_1091 1368763 - 1369026 + | hypothetical protein Acid345_1092 1369356 - 1370369 + | hypothetical protein TERM 1027 1371096 - 1371109 + G 70 -4.5 -4.41716 | TTCACGCGATTGTGG GTCGG GGTG CTGAC TTTCTTGTGTCCTAT TERM 1028 1371153 - 1371140 - g 71 -8.1 -3.95378 | overlap 1371137 GCAGATTGCAAAGAA GCGAG AGCG CTCGC GCGGAAGTGGTGTTC Acid345_1093 1370411 - 1371271 + | DNA adenine methylase TERM 1029 1371938 - 1371920 - g 89 -6 -5.03314 | GCTATGCTGAAAAAA TCAGCC GCCGGTG GGCTGA GATCGGTCACAGACT Acid345_1094 1371293 - 1372258 + | parB-like partition proteins Acid345_1095 1372255 - 1373118 + | hypothetical protein Acid345_1096 1373432 - 1373187 - | hypothetical protein TERM 1030 1373456 - 1373487 + r 95 -13 -4.14056 | opp_overlap 1373462, overlap 1373462 CCGATCATCGTTCAA CAAAAAGCCCCGCA TCGC TGCGGGGCTCTTCG TTTCTACTTTCGACT TERM 1031 1373481 - 1373462 - R 100 -15 -5.06816 | opp_overlap 1373456 1373462 ATCGTTCAACAAAAA GCCCCGCA TCGC TGCGGGGC TCTTCGTTTCTACTT TERM 1032 1373462 - 1373481 + r 95 -15 -3.39589 | opp_overlap 1373462, overlap 1373456 ATCGTTCAACAAAAA GCCCCGCA TCGC TGCGGGGC TCTTCGTTTCTACTT groEL 1375169 - 1373508 - | chaperonin GroEL TERM 1033 1373942 - 1373963 + g 82 -6.6 -4.78981 | gap 1, overlap 1373939 1373945 CAGCGCGGGTTGCGT GCATCGCGT CTTCC ACGCGA-GC TTTCTTTTCCTTCAT TERM 1034 1375268 - 1375295 + r 74 -9.8 -3.72027 | opp_overlap 1375267 1375266 GCCCTGATACGAATC TTGGTGCGGCGC TAGC GCGCCGGACGAA TTGTTACTCGAGGAT Acid345_1098 1375604 - 1375299 - | chaperonin Cpn10/GroES TERM 1035 1375421 - 1375434 + g 72 -5.9 -4.52781 | overlap 1375418 CTTTGACTTGCAGCG GGGTG GTCT CGCCC TTTTCGTTCTGCTTG Acid345_1099 1376150 - 1377247 + | peptidase M48, Ste24p TERM 1036 1377298 - 1377356 + T 95 -18.3 -2.69725 | gap 1, opp_overlap 1377288, overlap 1377299 AAGAAGCAAGCCATC -GTGCGCGGGTGTGGCTGAAGCGAATTA CTCC TGGTTCGCTTCCGCCACGTACGCGCACG AATTTATTTTTGCGC Acid345_1100 1377811 - 1377281 - | GCN5-related N-acetyltransferase Acid345_1101 1379062 - 1378016 - | hypothetical protein Acid345_1102 1379616 - 1379074 - | hypothetical protein Acid345_1103 1379640 - 1380092 + | hypothetical protein Acid345_1104 1380533 - 1380096 - | hypothetical protein TERM 1037 1380650 - 1380630 - R 100 -15.4 -3.77832 | opp_overlap 1380625 GCGGAAACCTAATAA GGCCCGGC AGTGA GCCGGGCC GGAAATATCTACGCG Acid345_1105 1380929 - 1380684 - | hypothetical protein Acid345_1106 1380961 - 1382238 + | hypothetical protein Acid345_1107 1382805 - 1382251 - | hypothetical protein TERM 1038 1383105 - 1383086 - R 93 -9.2 -4.68424 | CAAGGGAGGTAAAAA GCCCCAGC ACCT GCCAGGGC CGAATGAACTTAATA Acid345_1108 1384320 - 1383589 - | hypothetical protein TERM 1039 1384212 - 1384231 + g 73 -12.8 -2.71001 | opp_overlap 1384212, overlap 1384211 1384214 GGTCCGCGGCAATTA CGCCGGCC ATGT GGCCGGTG CTTGGTTTCCAGGTA TERM 1040 1384214 - 1384229 + g 71 -11.8 -2.89569 | opp_overlap 1384212, overlap 1384212 1384211 TCCGCGGCAATTACG CCGGCC ATGT GGCCGG TGCTTGGTTTCCAGG TERM 1041 1384475 - 1384449 - H 100 -16.6 -4.35524 | TCCGGAAATGCAAAA CCCCACACCCGA TTC CCAGGTGTGGGG CCCCCGGAATTGTCA Acid345_1109 1384752 - 1385477 + | hypothetical protein Acid345_1110 1385560 - 1386291 + | hypothetical protein Acid345_1111 1387774 - 1386320 - | hypothetical protein TERM 1042 1388985 - 1388951 - g 77 -12 -3.49475 | opp_overlap 1388959 TGTATTCGGACAGAA CACGGCGACCACCGGC CCG GCCGTTGGTTTCCGCG GCACGACCGCGTCTA TERM 1043 1388959 - 1388977 + G 71 -10.2 -3.53012 | opp_overlap 1388951 GACAGAACACGGCGA CCACCGGC CCG GCCGTTGG TTTCCGCGGCACGAC TERM 1044 1390050 - 1390018 - g 83 -15 -2.80816 | gap 1, overlap 1389994 GGCGTATCTACTACA CGATCCGCGCAACCG ACGG CGGTT-CGCAGATCG CGACCGAAGAAGGCG Acid345_1112 1388094 - 1390301 + | hypothetical protein TERM 1045 1390313 - 1390347 + T 95 -14.5 -3.28969 | gap 1, opp_overlap 1390322, overlap 1390316 1390322 GTAGGAAAGAACGTT CAGTAGAAAGGGCGGC TTCG GCCGCCCTTTTTA-TG CTTTCTCTTTCTTTA TERM 1046 1390316 - 1390345 + T 100 -17.3 -3.17739 | opp_overlap 1390322, overlap 1390313 1390322 GGAAAGAACGTTCAG TAGAAAGGGCGGC TTCG GCCGCCCTTTTTA TGCTTTCTCTTTCTT TERM 1047 1390322 - 1390339 + T 100 -14.1 -5.06735 | opp_overlap 1390322, overlap 1390316 1390313 AACGTTCAGTAGAAA GGGCGGC TTCG GCCGCCC TTTTTATGCTTTCTC TERM 1048 1390339 - 1390322 - T 100 -14.1 -3.96892 | opp_overlap 1390322 1390316 1390313 AACGTTCAGTAGAAA GGGCGGC TTCG GCCGCCC TTTTTATGCTTTCTC TERM 1049 1390376 - 1390397 + T 80 -4.4 -5.0538 | gap 1 TACCAATTCCCGGAT GCGC-TTGC GTAGG GCGATGCGC TTTTTTCGAATGCGA Acid345_1113 1391377 - 1390499 - | hypothetical protein TERM 1050 1391009 - 1390995 - G 77 -7.8 -4.36914 | opp_overlap 1391000 1391001, overlap 1391002 TCCTTGCTGAGAAAA CGGCAA ACG TCGCCG AATGCGGGCGACGAA TERM 1051 1391022 - 1391002 - G 72 -9.7 -3.786 | opp_overlap 1391001 1391000, overlap 1390995 TGAGAAAACGGCAAA CGTCGCC GAATGCG GGCGACG AATTTGCGGAAGTCG Acid345_1114 1391491 - 1392162 + | UbiE/COQ5 methyltransferase TERM 1052 1392184 - 1392170 - f 75 -6.4 -4.66938 | AGCCGTAAGACAAAA CCTTCA CCA CGAAGG GCACGGAGGAAACGA Acid345_1115 1392393 - 1393214 + | NmrA-like TERM 1053 1393223 - 1393205 - T 71 -4.4 -4.61633 | overlap 1393195 AGAGAGCCGTAAAAA GGCGAGCT GAT ATCGCGCC CGAATTTCTTTCATG Acid345_1116 1393718 - 1393251 - | hypothetical protein TERM 1054 1393291 - 1393307 + g 83 -5.7 -5.0133 | overlap 1393289 TTCGCTTGAGCGACC TCGGCGG CGG CCGCGGG TTTTTTCGGGAGCTC TERM 1055 1394129 - 1394145 + r 74 -10.8 -3.56099 | TACGTGCGGTCTGTC CCCGGG TTTCC CCCGGG TTTCCCGAACTTCTA Acid345_1117 1394427 - 1394158 - | hypothetical protein TERM 1056 1394627 - 1394608 - R 100 -12.8 -5.08601 | opp_overlap 1394608 1394622 CGATTTCAAGAAAAA CCCCGGGA GTGA CCCCGGGG TTCGGTTTGATTAGC TERM 1057 1394608 - 1394627 + r 80 -12.1 -3.33399 | opp_overlap 1394608, overlap 1394622 CGATTTCAAGAAAAA CCCCGGG AGTGAC CCCGGGG TTCGGTTTGATTAGC Acid345_1118 1395201 - 1394638 - | hypothetical protein TERM 1058 1395239 - 1395262 + r 77 -11 -3.47941 | gap 1, overlap 1395255 1395257 CGCGCGGGTTAATGG GCG-GCCGACG ATT CGTCGGCATGC TTGTCGTGCTTGGTG Acid345_1119 1395654 - 1395232 - | putative phophoslipid binding protein Acid345_1120 1395880 - 1396407 + | hypothetical protein Acid345_1121 1398160 - 1397357 - | hypothetical protein TERM 1059 1397934 - 1397905 - G 71 -7.2 -4.19238 | gap 1 CTCTCAAGCCCAAAA TC-CAGTGGCCCA TCTCG TGGGCGACTGTGA ACGCTTTTCTCTCCG Acid345_1122 1399176 - 1398160 - | XRE family transcriptional regulator Acid345_1123 1399713 - 1399177 - | hypothetical protein TERM 1060 1399393 - 1399405 + g 84 -2.6 -5.40474 | overlap 1399387 CCCACCTCTGTTTTC CGGG AGAAC CTCG TTTTTTTCGAAGAAT TERM 1061 1399754 - 1399778 + r 100 -8.5 -5.67063 | opp_overlap 1399755, overlap 1399755 CGAGCCAAGTTCAAA AGCCCAGCACA GAT TCTGCTGGGCC TTTTTTTCTCCTCGA TERM 1062 1399755 - 1399777 + r 90 -12 -3.99153 | opp_overlap 1399755, overlap 1399754 GAGCCAAGTTCAAAA GCCCAGCACA GAT TCTGCTGGGC CTTTTTTTCTCCTCG TERM 1063 1399777 - 1399755 - R 91 -12 -4.19953 | opp_overlap 1399755 1399754 GAGCCAAGTTCAAAA GCCCAGCACA GAT TCTGCTGGGC CTTTTTTTCTCCTCG Acid345_1124 1402827 - 1399813 - | vitamin B12-dependent ribonucleotide reductase TERM 1064 1403030 - 1403006 - H 86 -10.6 -4.08767 | GTCAGCGGGGTAAAA GGGGCGCCCC GCCTT GGGGAACCCC TGAATCGATCCATGC Acid345_1125 1403598 - 1403954 + | CopG family transcriptional regulator Acid345_1126 1403951 - 1404235 + | addiction module toxin, RelE/StbE Acid345_1127 1404454 - 1405533 + | DNA-cytosine methyltransferase Acid345_1128 1405545 - 1405952 + | T/G mismatch-specific endonuclease Acid345_1129 1406764 - 1405949 - | HNH endonuclease TERM 1065 1406250 - 1406261 + g 79 -5.8 -4.7497 | overlap 1406233 ACATGCACACTATCG GGTG CGGT CACC TTTTTCATGACTGCC TERM 1066 1407084 - 1407107 + r 84 -13.9 -3.06183 | GGATGGTTCGACTGC GGACGCGGA ACGATC TCCGCGTCC TTCGCTCACCATGAC Acid345_1130 1407957 - 1407127 - | cyclic nucleotide-binding protein Acid345_1131 1408093 - 1409271 + | butyryl-CoA dehydrogenase TERM 1067 1409607 - 1409630 + G 70 -4.4 -4.41348 | overlap 1409608 1409611 GTCGGCCGATCAGCG TGGGGCGGGG GAGG CCCTGCTGCG TTTCTTTGCGACCAA Acid345_1132 1409356 - 1410933 + | hypothetical protein Acid345_1133 1412473 - 1411109 - | phage integrase TERM 1068 1412543 - 1412576 + r 70 -8.9 -3.65046 | gap 1, opp_overlap 1412560 CAGTCATACTTGCAG CAGCGATGCAGAGG ATACGCG CCTCTGC-TCGCGG TTATTGCACTACGGC Acid345_1134 1413620 - 1412577 - | putative transcriptional regulator TERM 1069 1413782 - 1413763 - R 75 -3.6 -4.89729 | CAGAAAACCGAAAAA CTAAAACA GACA TGTCTCAG CTTTAGTTTTAGGAA Acid345_1135 1414747 - 1414472 - | hypothetical protein Acid345_1136 1415513 - 1414833 - | hypothetical protein Acid345_1137 1415548 - 1416390 + | hypothetical protein TERM 1070 1416430 - 1416417 - T 90 -8.1 -4.83169 | ATCTTGCTATAAAAA GAGGC ATAT GCCTC AACGGTTGTAGCGTT Acid345_1138 1417667 - 1417044 - | resolvase-like protein Acid345_1139 1418942 - 1417932 - | metallo-beta-lactamase superfamily hydrolase Acid345_1140 1419624 - 1418950 - | hypothetical protein Acid345_1141 1419915 - 1419691 - | XRE family transcriptional regulator Acid345_1142 1423570 - 1420799 - | hypothetical protein TERM 1071 1421703 - 1421728 + g 82 -10.3 -4.14511 | TGCTTTTTCGCGGTG GCTGCCGCCGC ATCT GCGTCGGCAAC TTTTCCGCTCACATT TERM 1072 1423111 - 1423153 + g 77 -10.5 -3.8377 | gap 2, opp_overlap 1423111 1423112, overlap 1423112 ATACTTCGTGGACAA TCGGCGGCGCAGCGGCGAGCC GAA GGCTTCCCGC--CGCCGCGGG TTTCCTCTGCAGCTT TERM 1073 1423112 - 1423152 + g 71 -11.8 -2.8978 | gap 2, opp_overlap 1423111 1423112, overlap 1423111 TACTTCGTGGACAAT CGGCGGCGCAGCGGCGAGCC GAA GGCTTCCCGC--CGCCGCGG GTTTCCTCTGCAGCT Acid345_1143 1423782 - 1426862 + | hypothetical protein Acid345_1144 1427533 - 1428459 + | hypothetical protein Acid345_1145 1428870 - 1428445 - | hypothetical protein Acid345_1146 1429394 - 1428867 - | GCN5-related N-acetyltransferase TERM 1074 1429456 - 1429421 - R 81 -11.8 -3.58269 | gap 1, overlap 1429413 1429422 1429448 1429451 TAACGGAGGCGGAAA TCCCCGCCC-TGTCCGC TGT GCGGATAAGGACGGGGC ACCCGAAGTTACTTC TERM 1075 1429455 - 1429422 - R 83 -15.3 -2.7464 | gap 1, overlap 1429413 1429421 1429448 1429451 AACGGAGGCGGAAAT CCCCGCCC-TGTCCGC TGT GCGGATAAGGACGGGG CACCCGAAGTTACTT Acid345_1147 1430571 - 1429465 - | aldose 1-epimerase TERM 1076 1432266 - 1432247 - g 72 -9.2 -3.72324 | CACCTTGATCAAGAA CGATGCCG ATCT CGGCAGCG GTGGCCTGGTGCTGA Acid345_1148 1430787 - 1432838 + | Ig-like, group 2 Acid345_1149 1434064 - 1432841 - | major facilitator transporter Acid345_1150 1434137 - 1434790 + | hypothetical protein TERM 1077 1434781 - 1434832 + T 74 -10.4 -3.4945 | gap 4, opp_overlap 1434817, overlap 1434784 1434785 1434814 GCACAGATTGGTGCG TGCGGCGTAGGTCCCACCCT-GTGGC TGAA GCCACAAGGGTGGGA-C-AC-CCACA TCTTCTTACTTAAGT TERM 1078 1434784 - 1434834 + T 71 -8.4 -3.84278 | gap 3, opp_overlap 1434817, overlap 1434781 1434785 1434814 CAGATTGGTGCGTGC GGCGTAGGT--CCCACCCT-GTGGC TGAA GCCACAAGGGTGGGACACCCACATC TTCTTACTTAAGTTT Acid345_1151 1437090 - 1434838 - | peptidase S9, prolyl oligopeptidase active site region TERM 1079 1436051 - 1436032 - G 75 -4.2 -4.87133 | opp_overlap 1436047, overlap 1436049 ACCCGCGAAATAAAA CGACGTAC CGAT GAACATCG GGAATGAGTCTCGAG TERM 1080 1437138 - 1437084 - G 93 -8.6 -4.72272 | gap 1, opp_overlap 1437100, overlap 1437094 1437095 1437100 TGTCTTGAGGAAAAA CTTGCACAAAGGAAAAGGCCGCCCG GCAACT CAGGCGGCCTTT-CCTTCAAGGGAG AATAGTTCCAACGGA TERM 1081 1437128 - 1437094 - R 100 -14.4 -3.92745 | gap 1, opp_overlap 1437100, overlap 1437084 1437095 1437100 AAAAACTTGCACAAA GGAAAAGGCCGCCCG GCAACT CAGGCGGCCTTT-CC TTCAAGGGAGAATAG TERM 1082 1437128 - 1437095 - R 93 -16.8 -2.94563 | opp_overlap 1437100, overlap 1437094 1437084 1437100 AAAACTTGCACAAAG GAAAAGGCCGCCCG GCAACT CAGGCGGCCTTTCC TTCAAGGGAGAATAG TERM 1083 1437123 - 1437100 - R 100 -13.1 -4.61873 | opp_overlap 1437100, overlap 1437094 1437095 1437084 TTGCACAAAGGAAAA GGCCGCCCG GCAACT CAGGCGGCC TTTCCTTCAAGGGAG TERM 1084 1437100 - 1437123 + r 82 -11.6 -3.90112 | opp_overlap 1437100 1437094 1437095 1437084 TTGCACAAAGGAAAA GGCCGCCCGG CAAC TCAGGCGGCC TTTCCTTCAAGGGAG Acid345_1152 1438400 - 1437336 - | hypothetical protein TERM 1085 1438321 - 1438306 - G 71 -7.6 -4.09685 | TCCCATCCGGCAAAA CTTTGC GGCA GCAAAG GCGCGGGAGCCGGGG Acid345_1153 1440645 - 1438450 - | N-acetylmuramoyl-L-alanine amidase TERM 1086 1439234 - 1439247 + g 78 -3.1 -5.09426 | TGAATTTCAGCGACC TCGGA GGCT TTCGA TTTTTTGCCCTTGGA TERM 1087 1440406 - 1440418 + g 80 -4.8 -4.87786 | CGACGAAGCTGGGGT GGTG AAGTA CACC TTTTTGTAAGCTTCA Acid345_1154 1441546 - 1440695 - | lytic transglycosylase, catalytic Acid345_1155 1442176 - 1441712 - | hypothetical protein Acid345_1156 1442302 - 1443084 + | indole-3-glycerol phosphate synthase Acid345_1157 1443084 - 1443749 + | phosphoribosylanthranilate isomerase TERM 1088 1443952 - 1443971 + G 70 -4.2 -4.56775 | gap 1, overlap 1443953 TGCTGCGTGAGTACG C-GGGACGT CCG ACGCCCCTG TTTTTGGCCAAGAAT Acid345_1158 1443750 - 1444976 + | tryptophan synthase subunit beta Acid345_1159 1444995 - 1445534 + | hypothetical protein TERM 1089 1445990 - 1446024 + G 76 -2.8 -4.99645 | gap 1, overlap 1445991 CCGACAAGTCCCGAC GCTCGGTTGAAGCTC ATCGCA GAGCA-CAGCCGAGG TTTTGTTTATGCGGT TERM 1090 1446094 - 1446074 - g 79 -13.3 -3.14931 | opp_overlap 1446085 GGCACGCGCCAGGAA GTCGCAAGC GAT GCTCGCGAC CTCGTGAAACGGTTG Acid345_1160 1445537 - 1446322 + | tryptophan synthase, alpha chain Acid345_1161 1446330 - 1446590 + | chorismate mutase Acid345_1162 1446594 - 1447454 + | prephenate dehydrogenase Acid345_1163 1447572 - 1448279 + | 3-oxoacid CoA-transferase, subunit A Acid345_1164 1448280 - 1448969 + | butyryl-CoA:acetate CoA transferase Acid345_1165 1449079 - 1450056 + | hypothetical protein Acid345_1166 1452333 - 1450063 - | hypothetical protein Acid345_1167 1452541 - 1453296 + | hypothetical protein Acid345_1168 1453710 - 1453300 - | glyoxalase/bleomycin resistance protein/dioxygenase Acid345_1169 1455582 - 1453723 - | lysine decarboxylase transcriptional regulator, CadC TERM 1091 1455580 - 1455547 - G 93 -5.4 -5.36441 | gap 1, overlap 1455551 1455552 CGGCGATACAAAAAA GATACCCAACGGCCA TACTG TAGCCATTGGA-ATC ATGGGGAGTTCCGGG Acid345_1170 1455638 - 1456123 + | hypothetical protein TERM 1092 1456267 - 1456244 - f 86 -12.4 -3.91716 | GTATTTTTCAAAGAA CCGTCTCGCC ATTT GGCGAGACCG AACAACATAAAGGAT Acid345_1171 1456292 - 1457347 + | hypothetical protein TERM 1093 1457349 - 1457395 + T 71 -4.5 -4.56597 | gap 2, opp_overlap 1457353 1457356, overlap 1457352 AGGCCCGTCCGTAGT CAAAT-C-AGTTCCGGGTTTCCC ATA GAGAAGCCCGGAACTTGCACATG TTTTTGCGAGAGAAG TERM 1094 1457389 - 1457353 - T 74 -10.1 -3.64703 | opp_overlap 1457352 1457349, overlap 1457356 CCGTCCGTAGTCAAA TCAGTTCCGGGTTTCCC ATA GAGAAGCCCGGAACTTG CACATGTTTTTGCGA TERM 1095 1457386 - 1457356 - T 93 -16.2 -2.94144 | opp_overlap 1457352 1457349, overlap 1457353 TCCGTAGTCAAATCA GTTCCGGGTTTCCC ATA GAGAAGCCCGGAAC TTGCACATGTTTTTG Acid345_1172 1457606 - 1457412 - | hypothetical protein Acid345_1173 1458218 - 1457625 - | dienelactone hydrolase TERM 1096 1458554 - 1458568 + G 81 -12.8 -3.59979 | GGCCATCGCCTGGAG CCCGGC AGC GCCGGG TTTCCGATCCGCGAA Acid345_1174 1458287 - 1458937 + | isochorismatase hydrolase Acid345_1175 1460190 - 1459126 - | translation initiation factor 2B subunit I TERM 1097 1459424 - 1459390 - G 78 -6.4 -4.66537 | gap 1, overlap 1459395 CGCCGCAACATAAAA CGGAATGCCGTGCTC CTTGGC GAGCACCGCAA-CCG TGTACGTGCCGATCT Acid345_1176 1460777 - 1460190 - | orotate phosphoribosyltransferase TERM 1098 1460574 - 1460611 + g 72 -9.1 -3.90112 | gap 1 GGCGCCCATGGTCAG TCCGCCAATCGCCGCAGG GTT CCACCCGCGATTG-CGGA TTTCGTTGAGGAAAA Acid345_1177 1460935 - 1461471 + | methylation Acid345_1178 1461484 - 1463103 + | metal dependent phosphohydrolase Acid345_1179 1463078 - 1463503 + | hypothetical protein TERM 1099 1463860 - 1463839 - g 72 -4.5 -4.56597 | gap 1, overlap 1463841 CCGCTGCTGCAAAAA CGC-CAGAAA CTG TTTCTGAACG AAGCGGTGTACACCA TERM 1100 1465071 - 1465057 - g 81 -3.4 -5.23316 | GAGTACATGAAAAAA GGCACC GGC GAGGCC CTGACGCCGCGCTAC Acid345_1180 1463503 - 1465125 + | oligoendopeptidase F-like TERM 1101 1465146 - 1465131 - T 100 -11.8 -5.0916 | opp_overlap 1465131 GCTGCAATAGAAAAA CCCCGC GTTC GCGGGG TTTGTTTGAATCACG TERM 1102 1465131 - 1465146 + T 95 -11.8 -4.46112 | opp_overlap 1465131 GCTGCAATAGAAAAA CCCCGC GTTC GCGGGG TTTGTTTGAATCACG Acid345_1181 1465883 - 1465167 - | hypothetical protein Acid345_1182 1466867 - 1465887 - | peptidase M50 Acid345_1183 1467054 - 1467293 + | hypothetical protein Acid345_1184 1467398 - 1467643 + | hypothetical protein Acid345_1185 1468115 - 1467792 - | histone-like DNA-binding protein dcd 1468243 - 1468797 + | deoxycytidine triphosphate deaminase TERM 1103 1468870 - 1468818 - g 100 -20.5 -3.12936 | opp_overlap 1468823, overlap 1468810 1468823 ATCGAAATTCGAATA GCGAACGCCGCGGATATCCCCGCCA TGC TGGGGGTGATCAACGCGGCGTTCGC TATCGAGACCTTCCT TERM 1104 1468865 - 1468823 - g 75 -11.8 -3.19293 | opp_overlap 1468823, overlap 1468818 AATTCGAATAGCGAA CGCCGCGGATATCCCCGCCA TGC TGGGGGTGATCAACGCGGCG TTCGCTATCGAGACC TERM 1105 1468823 - 1468865 + G 73 -11.8 -3.12351 | opp_overlap 1468818 1468823 AATTCGAATAGCGAA CGCCGCGGATATCCCCGCCA TGC TGGGGGTGATCAACGCGGCG TTCGCTATCGAGACC Acid345_1187 1468797 - 1469267 + | GCN5-related N-acetyltransferase TERM 1106 1469279 - 1469295 + T 95 -15.1 -3.67417 | opp_overlap 1469279 CTGACCAATGCAAAA GCCCCGC TCA GCGGGGC TTTCACGTTCAATCT TERM 1107 1469295 - 1469279 - T 100 -15.1 -4.30014 | opp_overlap 1469279 CTGACCAATGCAAAA GCCCCGC TCA GCGGGGC TTTCACGTTCAATCT Acid345_1188 1469706 - 1469320 - | hypothetical protein Acid345_1189 1471024 - 1469924 - | DNA polymerase III, delta prime subunit TERM 1108 1470277 - 1470260 - G 78 -11.3 -3.68302 | GGAAGATCGCAACAA CGTCAGG GCAT CCTGACG CGCCGCCGTGTACGC Acid345_1190 1471870 - 1471052 - | UbiE/COQ5 methyltransferase Acid345_1191 1472415 - 1471894 - | hypothetical protein Acid345_1192 1472455 - 1473183 + | hypothetical protein TERM 1109 1473994 - 1473970 - g 70 -4.4 -4.42386 | overlap 1473973 1473975 GCGGCACTTAGAAAA GAAGC-TGGTCA CCG TGACCATGC-TC GACAAATTGGACTGA TERM 1110 1473992 - 1473973 - g 74 -7.2 -4.33182 | gap 1, overlap 1473970 1473975 GCACTTAGAAAAGAA GC-TGGTCA CCG TGACCATGC TCGACAAATTGGACT Acid345_1193 1473275 - 1474009 + | DNA repair protein RecO glyQ 1474110 - 1475111 + | glycyl-tRNA synthetase subunit alpha TERM 1111 1475184 - 1475166 - f 77 -3.8 -5.00765 | opp_overlap 1475166, overlap 1475139 1475137 1475146 AAGGAATCAGAAAAA TCTCGAAA AAC CTTCGTGA TCCTTCGTGCCCTTC Acid345_1195 1475296 - 1477485 + | glycine--tRNA ligase, beta subunit TERM 1112 1477828 - 1477813 - g 72 -4.6 -4.56597 | opp_overlap 1477824, overlap 1477815 GTTGCGCGGCAAAAA GCTCGG TGCC CCCAGC GATCCGCTGCTCGTC TERM 1113 1479379 - 1479334 - g 88 -10.3 -4.48987 | gap 1 CGCCGACAACGAAAA GGACCGCCGCGCGGCGCTGAAG AAG CTCCTGC-CCATGCAGCGCTCC GACTTCGCCGGCCTG Acid345_1196 1477517 - 1480255 + | pyruvate phosphate dikinase TERM 1114 1480301 - 1480261 - T 81 -11.8 -3.50119 | overlap 1480259 1480262 CAGCAAGTAACAACA CCGCGGGTGCCC-CCTTCCC GAA GGGAGGGTGGGCGCCC-CGA AACATCAAAGGCACG TERM 1115 1480300 - 1480262 - T 75 -13.1 -2.69348 | overlap 1480261 1480259 AGCAAGTAACAACAC CGCGGGTGCCC-CCTTCCC GAA GGGAGGGTGGGCGCCC-CG AAACATCAAAGGCAC TERM 1116 1480335 - 1480306 - T 73 -10.7 -3.34398 | opp_overlap 1480307 1480312, overlap 1480307 1480311 1480312 GGGCGCCCCGAAACA TCAAAGGCACGGC TCCG GCCGTGCTTTTGT TTGCGGCGATAAAAT TERM 1117 1480307 - 1480334 + T 100 -16.4 -3.54424 | opp_overlap 1480307 1480306 1480311 1480312, overlap 1480312 GGCGCCCCGAAACAT CAAAGGCACGGC TCCG GCCGTGCTTTTG TTTGCGGCGATAAAA TERM 1118 1480334 - 1480307 - T 81 -14.2 -2.60496 | opp_overlap 1480307 1480312, overlap 1480306 1480311 1480312 GGCGCCCCGAAACAT CAAAGGCACGGC TCCG GCCGTGCTTTTG TTTGCGGCGATAAAA TERM 1119 1480330 - 1480311 - T 76 -9.2 -4.00532 | opp_overlap 1480307 1480312, overlap 1480307 1480306 1480312 CCCCGAAACATCAAA GGCACGGC TCCG GCCGTGCT TTTGTTTGCGGCGAT TERM 1120 1480329 - 1480312 - T 79 -12.7 -2.99837 | opp_overlap 1480307 1480312, overlap 1480311 1480307 1480306 CCCGAAACATCAAAG GCACGGC TCCG GCCGTGC TTTTGTTTGCGGCGA TERM 1121 1480312 - 1480329 + T 100 -12.7 -4.86731 | opp_overlap 1480312 1480311 1480307 1480306, overlap 1480307 CCCGAAACATCAAAG GCACGGC TCCG GCCGTGC TTTTGTTTGCGGCGA Acid345_1197 1481288 - 1480386 - | hypothetical protein Acid345_1198 1482124 - 1481288 - | hypothetical protein Acid345_1199 1482332 - 1483054 + | hypothetical protein TERM 1122 1483099 - 1483082 - f 91 -9.8 -4.56978 | opp_overlap 1483082 CCTGTAAACAATAAA GCCCGG TCCCCG CCGGGC TTTTGTTATTCCTAG TERM 1123 1483082 - 1483099 + F 100 -10.5 -4.92757 | opp_overlap 1483082 CCTGTAAACAATAAA GCCCGGT CCCC GCCGGGC TTTTGTTATTCCTAG Acid345_1200 1483178 - 1483681 + | hypothetical protein TERM 1124 1483752 - 1483769 + G 85 -9.8 -4.51174 | opp_overlap 1483750 TCGTGCCGCAAACTC CGCGCC CTTCCC GGCGCG TTTTCGTTGTCCTCG TERM 1125 1484311 - 1484299 - g 81 -3.3 -5.18726 | opp_overlap 1484310 TCGCTATAACAAAAA GCCGA CGA TTGGC AGACTGCTGCTGGTT Acid345_1201 1483739 - 1485772 + | TPR repeat-containing protein Acid345_1202 1486363 - 1485776 - | hypothetical protein TERM 1126 1486137 - 1486117 - G 83 -5.3 -4.87665 | opp_overlap 1486117 1486135 GCGGAGTGACAAAAA CGATATCGG TTG CCGCTAGCG TTTCATCGAGGAAAC Acid345_1203 1486956 - 1486360 - | hypothetical protein TERM 1127 1487106 - 1487128 + r 90 -10.6 -4.26344 | opp_overlap 1487106 GCACGTCACGAAAAA GAAGCTCGCA TTG TGCAAGCTTC TTTTGATGCGCGTCT TERM 1128 1487128 - 1487106 - R 100 -12.8 -4.7373 | opp_overlap 1487106 GCACGTCACGAAAAA GAAGCTCGCA TTG TGCAAGCTTC TTTTGATGCGCGTCT Acid345_1204 1488962 - 1487157 - | aspartyl-tRNA synthetase Acid345_1205 1490310 - 1488985 - | histidyl-tRNA synthetase Acid345_1206 1490875 - 1490360 - | carbonic anhydrase TERM 1129 1493304 - 1493294 - H 70 -3.2 -4.68593 | overlap 1493297 CTGACGATTGAAAAA GAAG TCG CCTC GCGGCTGACGATCGC TERM 1130 1494480 - 1494464 - g 87 -3.6 -5.40072 | overlap 1494478 GCCGGGTGAAAAAAA GCGCGT GAAAG AAGCGC TGGCCCGCAAGCGTA Acid345_1208 1494330 - 1494527 + | SSU ribosomal protein S21P TERM 1131 1494549 - 1494585 + F 100 -20.3 -2.71712 | opp_overlap 1494549 1494555, overlap 1494555 TGTTTTTGAATCACA GGAAAAGGCCGTGGCGA TCA TCGCTACGGCCTTTTGC ATTTGGGACGAAGCG TERM 1132 1494585 - 1494549 - f 95 -18.1 -2.90075 | opp_overlap 1494549 1494555, overlap 1494555 TGTTTTTGAATCACA GGAAAAGGCCGTGGCGA TCA TCGCTACGGCCTTTTGC ATTTGGGACGAAGCG TERM 1133 1494555 - 1494579 + F 100 -17.9 -4.35524 | opp_overlap 1494549 1494555, overlap 1494549 TGAATCACAGGAAAA GGCCGTGGCGA TCA TCGCTACGGCC TTTTGCATTTGGGAC TERM 1134 1494579 - 1494555 - f 100 -15.7 -4.39287 | opp_overlap 1494555 1494549, overlap 1494549 TGAATCACAGGAAAA GGCCGTGGCGA TCA TCGCTACGGCC TTTTGCATTTGGGAC TERM 1135 1494999 - 1495035 + G 70 -5 -4.48072 | gap 1, opp_overlap 1494974 1495001, overlap 1495001 CTGCGGCAAGGACAC TACCGTGCCGTTCAAGC CGAC GCAGGGACGGC-CGGTC TTTTGTCGTGAGTGT Acid345_1209 1494631 - 1495086 + | hypothetical protein Acid345_1210 1495626 - 1495186 - | response regulator receiver protein TERM 1136 1495762 - 1495733 - g 86 -8.5 -4.67943 | gap 1, overlap 1495726 1495734 1495752 CCGCAAGACACAAAA TGCGGCTTCCCGCC GTA AACGGGA-GCCGCC CATTGCTCCGTATAA TERM 1137 1495761 - 1495734 - g 76 -12 -3.40043 | gap 1, overlap 1495726 1495733 1495752 CGCAAGACACAAAAT GCGGCTTCCCGCC GTA AACGGGA-GCCGC CCATTGCTCCGTATA TERM 1138 1495878 - 1495868 - g 71 -8.2 -4.09739 | CCAATTGCTCGAAAA GGGC CTT GCCC GTGGGTCTTCGGCCA Acid345_1211 1495674 - 1497161 + | MiaB-like tRNA modifying enzyme Acid345_1212 1497693 - 1498574 + | 3-hydroxyacyl-CoA dehydrogenase TERM 1139 1499242 - 1499222 - g 76 -13.3 -2.75992 | overlap 1499219 TGGCAGCGAAGATCA TCGCCAACG CTC CGCTGGCGA TCCAGTACACGATGG Acid345_1213 1498624 - 1499406 + | short chain enoyl-CoA hydratase TERM 1140 1499462 - 1499497 + F 79 -7.6 -4.39329 | ATTTTTGGGAATGGC GCGCGTGGGCGA TTGGTGGGTGTT TCGTTCACGCGC TTTGTTCTGTAGGAT Acid345_1214 1499707 - 1500636 + | riboflavin synthase Acid345_1215 1500639 - 1501079 + | NusB antitermination factor Acid345_1216 1501096 - 1501359 + | hypothetical protein Acid345_1217 1501734 - 1501360 - | hypothetical protein Acid345_1218 1501761 - 1502462 + | TonB-like protein TERM 1141 1502507 - 1502477 - T 95 -14.1 -3.34517 | opp_overlap 1502482, overlap 1502463 1502482 AGCTTTGCTGAAATA GAAAAGCCCTCCC ACGCG GGGAGGGCTTTTT ACTTTCGGACTGACT TERM 1142 1502482 - 1502502 + T 100 -14 -4.98531 | opp_overlap 1502463 1502477 1502482 TGCTGAAATAGAAAA GCCCTCCC ACGCG GGGAGGGC TTTTTACTTTCGGAC TERM 1143 1502502 - 1502482 - T 100 -14 -4.78848 | opp_overlap 1502482, overlap 1502463 1502477 TGCTGAAATAGAAAA GCCCTCCC ACGCG GGGAGGGC TTTTTACTTTCGGAC Acid345_1219 1504737 - 1502521 - | hypothetical protein Acid345_1220 1506718 - 1504889 - | TPR repeat-containing protein TERM 1144 1505285 - 1505299 + g 71 -12.8 -2.58544 | overlap 1505284 GAGGCGCTCGGCATC CGCGGC ATC GCCGCG CTTGTAAACCTCGAA rpsL 1507121 - 1507495 + | 30S ribosomal protein S12 Acid345_1222 1507510 - 1507983 + | 30S ribosomal protein S7 Acid345_1223 1508095 - 1510188 + | translation elongation factor 2 (EF-2/EF-G) TERM 1145 1510229 - 1510195 - f 86 -14.3 -2.90723 | opp_overlap 1510176 1510174, overlap 1510174 GCACGGTGAATCACA CGGAGCTACCTGTTC TTTGT GATCAGGGAGCTCCG GATACGACCTGGCAG Acid345_1224 1510559 - 1511746 + | elongation factor Tu TERM 1146 1511805 - 1511787 - f 95 -11.6 -4.64676 | opp_overlap 1511799, overlap 1511768 GGACCCGCAACAAAA CCTGCGGC AAG GCCGCGGG GCGGTTCGTGAGAAC Acid345_1225 1511813 - 1512184 + | 30S ribosomal protein S10 TERM 1147 1512324 - 1512312 - g 72 -9.1 -3.83026 | CTCTTCGACAGCAAA GGCGA TGT TCGCC CTGTCACGGTGCTGC TERM 1148 1512402 - 1512383 - g 75 -8.5 -3.96449 | opp_overlap 1512392 CAAGACGGCAAACAA GGACGGC TACGAT GCCGCCC AGGTCGGACTCGTTG Acid345_1226 1512255 - 1512989 + | 50S ribosomal protein L3P TERM 1149 1513027 - 1512999 - f 86 -10.9 -4.10429 | overlap 1512989 1513000 AAGTAGTTGGGAAAA TCCCCACCCTGGC TTC GCTAGAGTGGGGC ACCCGATAGAGATTG TERM 1150 1513026 - 1513000 - f 91 -14.4 -3.05775 | overlap 1512989 1512999 AGTAGTTGGGAAAAT CCCCACCCTGGC TTC GCTAGAGTGGGG CACCCGATAGAGATT Acid345_1227 1513055 - 1513708 + | 50S ribosomal protein L4P TERM 1151 1513982 - 1513947 - g 84 -12.6 -3.65046 | CCCCGACTGGAAGAA GGCATACGTTCGCCTG AAGA CAGGCGAAAAGATGCC GGAGTACGCCGAGAA Acid345_1228 1513708 - 1514004 + | 50S ribosomal protein L23P TERM 1152 1514048 - 1514016 - f 95 -11.3 -4.59853 | overlap 1514017 1514043 GTAACGGGGTAAAAA CCCCCACGTCTCG AAAACAG CGAGACATGGGGC ACCCGAGAAGAGACG TERM 1153 1514047 - 1514017 - f 95 -14.8 -3.3543 | overlap 1514016 1514043 TAACGGGGTAAAAAC CCCCACGTCTCG AAAACAG CGAGACATGGGG CACCCGAGAAGAGAC rplB 1514067 - 1514894 + | 50S ribosomal protein L2 Acid345_1230 1514918 - 1515208 + | SSU ribosomal protein S19P Acid345_1231 1515222 - 1515725 + | 50S ribosomal protein L22P Acid345_1232 1515776 - 1516447 + | SSU ribosomal protein S3P rplP 1516506 - 1516925 + | 50S ribosomal protein L16 Acid345_1234 1516945 - 1517220 + | 50S ribosomal protein L29P Acid345_1235 1517224 - 1517529 + | SSU ribosomal protein S17P TERM 1154 1517575 - 1517540 - f 81 -12 -3.6106 | gap 1, overlap 1517568 GCTAAGACCCCGAAA GT-CCCCACGTCTCG ACAAACG CGAGACATGGGGCAC CCTGAGTGTGGGTGA Acid345_1236 1517606 - 1517977 + | 50S ribosomal protein L14P Acid345_1237 1517999 - 1518328 + | 50S ribosomal protein L24P TERM 1155 1518481 - 1518469 - g 75 -10.5 -3.65827 | TAAGCGCCAGGCAAA GGCCG AAG CGGCC GAGGCGCCCCAGAGC rplE 1518410 - 1519072 + | 50S ribosomal protein L5 Acid345_1239 1519108 - 1519344 + | SSU ribosomal protein S14P TERM 1156 1519380 - 1519349 - f 74 -10.2 -3.48276 | gap 1, overlap 1519351 1519352 CGTCCTGGTAGAGAA CATCCCCACCCTAGC TTC GCTAGAGTGGGG-CA CCCAAGAATGGGTAA TERM 1157 1519379 - 1519351 - f 95 -15.3 -3.31726 | overlap 1519349 1519352 TCCTGGTAGAGAACA TCCCCACCCTAGC TTC GCTAGAGTGGGGC ACCCAAGAATGGGTA TERM 1158 1519378 - 1519352 - f 100 -18.8 -2.58822 | overlap 1519351 1519349 CCTGGTAGAGAACAT CCCCACCCTAGC TTC GCTAGAGTGGGG CACCCAAGAATGGGT Acid345_1240 1519462 - 1519863 + | SSU ribosomal protein S8P TERM 1159 1519947 - 1519929 - f 84 -8.8 -4.28713 | AACACCAGGAAGAAA CTGCGGCT TTG ATCCGCAG CCGATGAGAAGAGAC Acid345_1241 1519964 - 1520503 + | 50S ribosomal protein L6P Acid345_1242 1520581 - 1520955 + | 50S ribosomal protein L18P TERM 1160 1520996 - 1520964 - f 91 -11.3 -4.30576 | overlap 1520965 1520991 GTTCTAGGATGAAAA TCCCCACGTCTCG GAAATCG CGAGACATGGGGC ACCCGAGCAGAGAGT TERM 1161 1520995 - 1520965 - f 95 -14.8 -3.18024 | overlap 1520964 1520991 TTCTAGGATGAAAAT CCCCACGTCTCG GAAATCG CGAGACATGGGG CACCCGAGCAGAGAG Acid345_1243 1521033 - 1521542 + | SSU ribosomal protein S5P Acid345_1244 1521546 - 1521770 + | 50S ribosomal protein L30P TERM 1162 1521927 - 1521909 - g 71 -11 -3.19425 | overlap 1521901 AATGAATCTCAGTAA TCTGCGGG CTC CCCGCAAA GCCAACGAAAAGAAG TERM 1163 1522024 - 1522040 + G 80 -10.1 -4.07568 | overlap 1522025 1522036 CGTTCGCGCAGCGGT TCGCGCA TGA TGCGCGG TTTTGAAGGCGGCCA Acid345_1245 1521895 - 1522329 + | 50S ribosomal protein L15P Acid345_1246 1522335 - 1523726 + | protein translocase subunit secY/sec61 alpha TERM 1164 1523774 - 1523736 - f 100 -19 -4.4009 | opp_overlap 1523734 1523733, overlap 1523769 TGGTAGTTGAGAAAA GCCCCACCCTAAGCGC GAAAACG GCGCTTAGAATGGGGC ACCCTTTTGTGCAGT TERM 1165 1524031 - 1524015 - g 82 -13.7 -3.19371 | overlap 1524001 AGGCACCCAATCCAA GCGCCTG GTG CAGGCGC TGGGGGTCCCGCAGA Acid345_1247 1523938 - 1524648 + | adenylate kinase TERM 1166 1524691 - 1524670 - g 72 -6.6 -4.35524 | gap 1 TGCCGAAATTGAAAA GATGC-GCC GCAGT GGCCGCATC GTGCGACAGGTCCTT Acid345_1248 1524632 - 1525384 + | methionine aminopeptidase, type I Acid345_1249 1525477 - 1525695 + | translation initiation factor 1 Acid345_1250 1525701 - 1525826 + | 50S ribosomal protein L36P rpsM 1525894 - 1526277 + | 30S ribosomal protein S13 Acid345_1252 1526292 - 1526720 + | 30S ribosomal protein S11 Acid345_1253 1526754 - 1527098 + | glyoxalase/bleomycin resistance protein/dioxygenase Acid345_1254 1527184 - 1527813 + | SSU ribosomal protein S4P TERM 1167 1527831 - 1527855 + F 89 -13.6 -3.75738 | opp_overlap 1527824 GAAGTAACCGAATGT GGTGCGCGAC ATTGC GTTGCGCACC TTGTTCCTAATCGTC Acid345_1255 1527935 - 1529041 + | DNA-directed RNA polymerase subunit alpha TERM 1168 1529089 - 1529052 - f 93 -13.3 -3.86897 | overlap 1529056 TCTAGCCTGGAGAAA TTGAGGCAGCCCGCCGC TACG GCGGCGGGTAGCCCGAA AAGATTAAAGGGGCT TERM 1169 1529085 - 1529056 - f 89 -16.3 -2.70354 | overlap 1529052 GCCTGGAGAAATTGA GGCAGCCCGCCGC TACG GCGGCGGGTAGCC CGAAAAGATTAAAGG TERM 1170 1529536 - 1529523 - g 70 -3.7 -4.63542 | overlap 1529513 1529524 GAGAAGCGCGAAAAA CGCGC TGCA GCCCG CGCCAAGCGTGCCGA Acid345_1256 1529139 - 1529624 + | 50S ribosomal protein L17P TERM 1171 1529651 - 1529671 + F 100 -18.3 -5.61881 | opp_overlap 1529646 GGCGGCAAGATTCAG CGCACCCGC GTT GCGGGTGCG TTTTTCTTTTTACAA Acid345_1257 1529779 - 1530090 + | hypothetical protein Acid345_1258 1530117 - 1530737 + | GCN5-related N-acetyltransferase Acid345_1259 1531246 - 1530734 - | hypothetical protein TERM 1172 1530975 - 1530954 - G 70 -4.3 -4.58395 | overlap 1530956 CCCATCCGCCAAAAA TACTCGCGC CCAC GCGTGAGGA CTGCCTGACGATTAC Acid345_1260 1532752 - 1531253 - | inosine-5'-monophosphate dehydrogenase TERM 1173 1532868 - 1532893 + r 71 -10.3 -3.17714 | opp_overlap 1532871, overlap 1532851 1532858 1532870 GGTCGCCTGAGGCGC AAACGGCCGGG TTTC CCCGGCCGATC TTGCTACGGATTTCC TERM 1174 1532870 - 1532891 + r 81 -12.9 -3.14795 | opp_overlap 1532871, overlap 1532851 1532868 1532858 TCGCCTGAGGCGCAA ACGGCCGGG TTTC CCCGGCCGA TCTTGCTACGGATTT TERM 1175 1532890 - 1532871 - R 100 -16.4 -3.57144 | opp_overlap 1532851 1532870 1532868 1532858 CGCCTGAGGCGCAAA CGGCCGGG TTTC CCCGGCCG ATCTTGCTACGGATT TERM 1176 1532901 - 1532915 + r 100 -5 -5.61881 | overlap 1532858 GGCCGATCTTGCTAC GGATTT CCT GAATCC TTTTTCTTTTTGGCC Acid345_1261 1533673 - 1532897 - | hypothetical protein Acid345_1262 1534550 - 1533753 - | enoyl-CoA hydratase/isomerase Acid345_1263 1534699 - 1535157 + | ribose-5-phosphate isomerase TERM 1177 1535655 - 1535628 - g 74 -6.2 -4.49556 | overlap 1535629 GCGTGACCAAAGAAA CCGAGACCATCG ATTA CGACGAGCTCGA GAAGCTTGCGCTGGA Acid345_1264 1535174 - 1536454 + | serine hydroxymethyltransferase TERM 1178 1536470 - 1536494 + F 100 -16.5 -5.27477 | TTCGAATTTGAGTAC CCCACTCTAGC GAA GCTAGGGTGGG TTTTTTCCTTCAAGT Acid345_1265 1536522 - 1537652 + | glycosyl transferase, group 1 Acid345_1266 1537883 - 1538635 + | hypothetical protein TERM 1179 1539192 - 1539160 - g 90 -8.3 -5.00616 | opp_overlap 1539183 1539187 TTCTTCGGCAAAAAA GTCGTCGCACAACTG CTG CTTTCGAGCGACGAC TTCACGTCGGCTCTT Acid345_1267 1538899 - 1539675 + | glutamate 5-kinase Acid345_1268 1539678 - 1540907 + | glutamate-5-semialdehyde dehydrogenase TERM 1180 1540985 - 1540997 + T 74 -3.4 -4.89339 | opp_overlap 1540985 AACCCGAAGTTAGAA GTTG GTAAA CAAC TTTTTATAAGTGCTT Acid345_1269 1542438 - 1541236 - | glycine cleavage T protein (aminomethyl transferase) Acid345_1270 1542522 - 1544189 + | FAD dependent oxidoreductase Acid345_1271 1544194 - 1545786 + | amine oxidase Acid345_1272 1546864 - 1545797 - | RNA-3'-phosphate cyclase TERM 1181 1546029 - 1546045 + g 88 -15.1 -3.61894 | opp_overlap 1546025, overlap 1546040 GACGCAACATACTGC GCGGCCG CGA CGGCCGC TTCTTCGGCGACCTT Acid345_1273 1548116 - 1546887 - | hypothetical protein TERM 1182 1547439 - 1547383 - G 88 -14.4 -3.54424 | gap 1, opp_overlap 1547395 TTCCAGCGCGCGAAA TCCTGTGCCCACTCGACCGCTTCCACG TATT CGTGGAAGTGCTCG-GTGTGCTCCGGA AAGTACGCGAGGTCG TERM 1183 1547395 - 1547428 + g 76 -13.9 -2.78463 | opp_overlap 1547383 AAATCCTGTGCCCAC TCGACCGCTTCCACG TATT CGTGGAAGTGCTCGG TGTGCTCCGGAAAGT TERM 1184 1547573 - 1547604 + g 83 -13.8 -3.59979 | opp_overlap 1547563 1547562 TGAACCAGACGTTGT CCGATTCATCGAGG CACA CCTCGATGAAGTGG TTTCCCGTGCCGAGC TERM 1185 1547746 - 1547763 + g 75 -10.5 -3.73647 | TCACTCCACGCTCCG CGGTCGC CAGC GCGGCCG TTGTTGGTGCGTCCG Acid345_1274 1548168 - 1549868 + | regulator of RNA terminal phosphate cyclase TERM 1186 1550107 - 1550125 + F 80 -8.8 -4.1466 | overlap 1550099 CATCACTGCGCGCCC GGTGCGCT CTT ACCGCACC TTTTCACCCTTACCT Acid345_1275 1550473 - 1551189 + | PHP-like phosphoesterase Acid345_1276 1551285 - 1551857 + | hypothetical protein Acid345_1277 1552389 - 1551919 - | bacterioferritin TERM 1187 1552489 - 1552470 - R 100 -13.6 -4.56597 | opp_overlap 1552470 TTTGTGCGCGAAAAA GCCCGAGA CGAG TCTCGGGC TGGTTGCAATTCTGG TERM 1188 1552470 - 1552489 + r 79 -13.6 -2.76453 | opp_overlap 1552470 TTTGTGCGCGAAAAA GCCCGAGA CGAG TCTCGGGC TGGTTGCAATTCTGG Acid345_1278 1553798 - 1552509 - | TPR repeat-containing protein TERM 1189 1553209 - 1553243 + g 74 -6.3 -4.53777 | overlap 1553210 CCCGAAGCTGCGGCC TGCGAGTAGTAGCGG TAAGC CTGCTGCAGCTCGCC TTCTTTTTCCTTGGC Acid345_1279 1554000 - 1555250 + | hypothetical protein TERM 1190 1555271 - 1555309 + F 87 -8.1 -4.56597 | overlap 1555276 AGAGCGGGCTGCAAA GTTTATGCTCTCGGCGA TATGC TTGCCGGGAGCATTCGC TTTTTGAGCCAGGGC TERM 1191 1555276 - 1555304 + F 88 -13.2 -3.45031 | overlap 1555271 GGGCTGCAAAGTTTA TGCTCTCGGCGA TATGC TTGCCGGGAGCA TTCGCTTTTTGAGCC TERM 1192 1555430 - 1555451 + G 87 -12.9 -3.84246 | CGAATTCTGGAGGCT CGCGACCGC ATCG GCGGCCGCG TTTGGTCGTTGCCGG Acid345_1280 1555331 - 1556632 + | amine oxidase TERM 1193 1556803 - 1556786 - T 70 -9.9 -3.32963 | ATGGCGACCGGAGAA TCCGCAT AGCG ATGCGGA CTCGGAGTGGAGCTA TERM 1194 1556851 - 1556862 + T 70 -3 -4.70659 | TTCCACCCGAACTCC TTTG TTTT CAAA TTTTTGCCTCTAACC TERM 1195 1556994 - 1556976 - T 100 -12.4 -4.68103 | overlap 1556989 TGAAGGCGAAGAAAA GGCACGCC CAA AGCGTGCC CTTCACGAAGCGTCT Acid345_1281 1557386 - 1557015 - | hypothetical protein Acid345_1282 1559019 - 1557586 - | pyridoxal-dependent decarboxylase Acid345_1283 1560059 - 1559025 - | transcriptional regulator Ada / DNA-O6-methylguanine--protein-cysteine S-methyltransferase Acid345_1284 1560224 - 1560589 + | PadR family transcriptional regulator TERM 1196 1561048 - 1561069 + G 73 -2.9 -4.7497 | gap 1, opp_overlap 1561029, overlap 1561049 CGACCAATCTGGGTC GCACCGG-GC ATG GCGCTGGTGA TTTTTCGTACATGAC Acid345_1285 1560582 - 1563323 + | ABC efflux pump, inner membrane subunit Acid345_1286 1565118 - 1563592 - | lysyl-tRNA synthetase Acid345_1287 1565290 - 1565646 + | NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 TERM 1197 1565675 - 1565699 + F 100 -14.3 -3.97368 | opp_overlap 1565679, overlap 1565679 GGCTTTAGGTGTTAG GAGAGGCGGCT ATG GGCCGCCTTTC TTTATGCGTTGAAAA TERM 1198 1565679 - 1565695 + F 95 -11.5 -4.59089 | opp_overlap 1565679, overlap 1565675 TTAGGTGTTAGGAGA GGCGGCT ATG GGCCGCC TTTCTTTATGCGTTG TERM 1199 1566377 - 1566361 - g 72 -4.4 -4.56597 | gap 1, overlap 1566365 TTCGTTCGCGAAAAA CGA-GCG GGTG CGCGTCG AGGTCCCGATTAAAG Acid345_1288 1565933 - 1566616 + | NADH (or F420H2) dehydrogenase, subunit C TERM 1200 1566676 - 1566659 - g 70 -2.7 -4.77567 | ATCTCGAGAACAAAA CGTTC CTGGATTC GAACG AGCTGGTCCTCAATA Acid345_1289 1566613 - 1567758 + | NADH dehydrogenase I, D subunit Acid345_1290 1567755 - 1569035 + | respiratory-chain NADH dehydrogenase, subunit 1 Acid345_1291 1569032 - 1569490 + | 4Fe-4S ferredoxin, iron-sulfur binding Acid345_1292 1569487 - 1569996 + | NADH-ubiquinone/plastoquinone oxidoreductase, chain 6 Acid345_1293 1569999 - 1570304 + | NADH-ubiquinone oxidoreductase, chain 4L Acid345_1294 1570313 - 1572445 + | proton-translocating NADH-quinone oxidoreductase, chain L TERM 1201 1572580 - 1572562 - g 75 -8.8 -4.06611 | opp_overlap 1572570 GAAGGAGAACAAGAA CGCCATCC GCT GGATCGCG AACCTCGCGGCGCTG Acid345_1295 1572473 - 1574152 + | proton-translocating NADH-quinone oxidoreductase, chain M TERM 1202 1575622 - 1575639 + G 71 -12.7 -2.65884 | overlap 1575621 GGTATCGGATTGTTC CCGGAGG TCTT CCTCCGG ATTGTGAATTGGTCG Acid345_1296 1574164 - 1575699 + | proton-translocating NADH-quinone oxidoreductase, chain N TERM 1203 1575722 - 1575745 + F 73 -8.8 -3.88698 | AGGTTTCCTTGGGAT GGGAGGGCGG ACGA TTGCTCTCCC TGTTTTCTGTCGGTC Acid345_1297 1576064 - 1576849 + | hypothetical protein TERM 1204 1576870 - 1576889 + F 100 -12.8 -5.46706 | opp_overlap 1576869 1576870 GGCTACGTTCGAAAG CGGCGGGG TCAC TCCCGCCG TTTTTCTTTTCGCGT TERM 1205 1576889 - 1576870 - f 72 -12.1 -2.73124 | opp_overlap 1576870, overlap 1576869 GGCTACGTTCGAAAG CGGCGGG GTCACT CCCGCCG TTTTTCTTTTCGCGT Acid345_1298 1576932 - 1577351 + | hypothetical protein TERM 1206 1577959 - 1577977 + G 80 -4.4 -4.88736 | GAACATGTTCGCCGG CGACATGG TGA CCTTGGCG TTTTTCTCGCTGGTG Acid345_1299 1577378 - 1578115 + | ATP synthase F0, A subunit TERM 1207 1578374 - 1578400 + G 73 -12.3 -3.1552 | gap 1, overlap 1578387 ATTCGGCATCGCTGT CGG-TCTGGCCG CACT CGGCCAGGGCCG TGTTGCTGCCTCGGC Acid345_1300 1578228 - 1578542 + | H+-transporting two-sector ATPase, C subunit TERM 1208 1578557 - 1578590 + F 100 -13.9 -4.49556 | overlap 1578563 GAGGATCTCGCGTAT CAGGAGCCCCGGTCC GAAC GGATCGGGGTTTTTG TTTGTTTCCTCGCCG TERM 1209 1578563 - 1578584 + F 100 -13.7 -5.5454 | overlap 1578557 CTCGCGTATCAGGAG CCCCGGTCC GAAC GGATCGGGG TTTTTGTTTGTTTCC Acid345_1301 1579310 - 1579642 + | hypothetical protein Acid345_1302 1580498 - 1579650 - | hypothetical protein TERM 1210 1580864 - 1580845 - R 100 -11.4 -4.77036 | opp_overlap 1580845 1580843 TGCGAGCAGGAAAAA GCCCCGTC TCGC GACGAGGC TCTTATGCAAGACAG Acid345_1303 1582364 - 1580886 - | proton-translocating NADH-quinone oxidoreductase, chain N Acid345_1304 1583926 - 1582361 - | proton-translocating NADH-quinone oxidoreductase, chain M Acid345_1305 1585953 - 1583923 - | proton-translocating NADH-quinone oxidoreductase, chain L Acid345_1306 1586267 - 1585956 - | NADH-ubiquinone oxidoreductase, chain 4L Acid345_1307 1586764 - 1586264 - | NADH-ubiquinone/plastoquinone oxidoreductase, chain 6 Acid345_1308 1587864 - 1586800 - | respiratory-chain NADH dehydrogenase, subunit 1 TERM 1211 1586960 - 1586949 - G 70 -2.2 -4.76892 | ACAGGAACGCAAAAA TCCG CAGG CAGA ACCAGAACACCGGCA Acid345_1309 1590431 - 1588065 - | NADH-quinone oxidoreductase, chain G TERM 1212 1590132 - 1590186 + g 75 -8.5 -3.94773 | gap 1 GGCGTCGCACACCGG GCAGTCGAGCGGATGGTTGC-CGAGC AGCA GTTCGAGCATCGATTTGCGCGCCTGC TTGATTTTTTCGGTC TERM 1213 1590299 - 1590281 - G 71 -11 -3.31144 | TCTCGACTTCCACAA GGCACATG CGG CATGCGCC CTGGAGCGAGAGTCC Acid345_1310 1590726 - 1590424 - | hypothetical protein Acid345_1311 1592054 - 1590735 - | NADH-quinone oxidoreductase, F subunit Acid345_1312 1592564 - 1592082 - | NADH-quinone oxidoreductase, E subunit Acid345_1313 1593861 - 1592656 - | NADH dehydrogenase I, D subunit TERM 1214 1592777 - 1592816 + g 76 -13.6 -2.78935 | gap 1, opp_overlap 1592775 1592774 1592778 AACGATGGAGAACGC ATGTGAACG-CGGTACGGC TTG GCCGTGCCGTCGCTCACAA TGTAGTAACCCATCT TERM 1215 1592815 - 1592778 - G 85 -17.1 -2.60808 | gap 1, opp_overlap 1592777, overlap 1592775 1592774 ACGATGGAGAACGCA TGTGAACG-CGGTACGGC TTG GCCGTGCCGTCGCTCACA ATGTAGTAACCCATC Acid345_1314 1594361 - 1593864 - | NADH (or F420H2) dehydrogenase, subunit C TERM 1216 1594112 - 1594101 - G 70 -4.4 -4.46112 | CGGGATTGAAAGAAA GTGA TAGC TCAC TTCAAAACGAGGCTC Acid345_1315 1594771 - 1594364 - | NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 TERM 1217 1594481 - 1594493 + g 72 -4.7 -4.64598 | opp_overlap 1594478 1594481 GGAGTAAGCGAACAA CGCGG CGC CGGCG TTTTTCAGGTCCTTA Acid345_1316 1594988 - 1595566 + | hypothetical protein Acid345_1317 1595614 - 1595814 + | thiamine biosynthesis protein ThiS Acid345_1318 1595814 - 1596239 + | hypothetical protein Acid345_1319 1596362 - 1596886 + | MerR family transcriptional regulator Acid345_1320 1596913 - 1597176 + | hypothetical protein TERM 1218 1597258 - 1597295 + T 100 -16.4 -3.92542 | opp_overlap 1597258, overlap 1597260 AGCCCCTGCGACACA CG-GGCGCGGCCGGAGTT GCTC GACTCCG-CCGCGCCTCG TTCTTTACCCGTGCC TERM 1219 1597295 - 1597258 - T 87 -15.7 -2.87211 | opp_overlap 1597258 1597260 AGCCCCTGCGACACA CG-GGCGCGGCCGGAGT TGCTCG ACTCCG-CCGCGCCTCG TTCTTTACCCGTGCC TERM 1220 1597260 - 1597292 + T 100 -17.8 -3.02639 | gap 1, opp_overlap 1597258, overlap 1597258 CCCCTGCGACACACG GGCGCGGCCGGAGTT GCTC GACTCCG-CCGCGCC TCGTTCTTTACCCGT Acid345_1321 1598439 - 1597300 - | chromate transporter TERM 1221 1597586 - 1597561 - G 81 -3.1 -5.31275 | overlap 1597575 CGCCACCAGAAAAAA CGCCGGCAGGA AGAT TGCCACCGTCG CCACGGCCGCACCGC Acid345_1322 1598873 - 1598436 - | DoxX TERM 1222 1598549 - 1598527 - G 79 -6.8 -4.68994 | overlap 1598528 AGCAGCATGCAAAAA TCCACGCGGG CCT CGCGCGCGGT CGCCCAGAATCCTGC Acid345_1323 1599577 - 1598870 - | hypothetical protein Acid345_1324 1599731 - 1600054 + | phage shock protein C, PspC TERM 1223 1600089 - 1600122 + T 79 -7.9 -4.39166 | overlap 1600090 1600091 1600109 1600110 1600110 TCAGCTTTTTGCTGA GCCGGCGGACGCGCT CCGA ATCGCGGCCGCCGCA TTTTGCTGTCTGCGG TERM 1224 1600090 - 1600121 + T 74 -11.4 -3.23018 | overlap 1600089 1600091 1600109 1600110 1600110 CAGCTTTTTGCTGAG CCGGCGGACGCGCT CCGA ATCGCGGCCGCCGC ATTTTGCTGTCTGCG TERM 1225 1600091 - 1600120 + T 83 -14.9 -2.53329 | overlap 1600090 1600089 1600109 1600110 1600110 AGCTTTTTGCTGAGC CGGCGGACGCGCT CCGA ATCGCGGCCGCCG CATTTTGCTGTCTGC TERM 1226 1600234 - 1600179 - T 83 -14.2 -2.78463 | opp_overlap 1600179 1600181, overlap 1600181 1600183 ATCCCCTTCACCACA GAGACGCAGAGGTCACAGAGAG AAATAATTGAAA ATCTCTGTGACCTCTGTGCCTC TGTGGTGAATAAATC TERM 1227 1600179 - 1600234 + T 83 -14.2 -2.81133 | opp_overlap 1600179 1600181 1600183, overlap 1600181 ATCCCCTTCACCACA GAGACGCAGAGGTCACAGAGAG AAATAATTGAAA ATCTCTGTGACCTCTGTGCCTC TGTGGTGAATAAATC TERM 1228 1600232 - 1600181 - T 71 -11 -2.94099 | opp_overlap 1600179 1600181, overlap 1600179 1600183 CCCCTTCACCACAGA GACGCAGAGGTCACAGAGAG AAATAATTGAAA ATCTCTGTGACCTCTGTGCC TCTGTGGTGAATAAA TERM 1229 1600181 - 1600232 + T 71 -11 -2.95298 | opp_overlap 1600181 1600179 1600183, overlap 1600179 CCCCTTCACCACAGA GACGCAGAGGTCACAGAGAG AAATAATTGAAA ATCTCTGTGACCTCTGTGCC TCTGTGGTGAATAAA Acid345_1325 1600623 - 1600252 - | glyoxalase/bleomycin resistance protein/dioxygenase TERM 1230 1601337 - 1601321 - g 76 -5.1 -4.78107 | CATCACCACGAAAAA GGGCTTC GAG AAAACCC TGCAGCAACTCGACG Acid345_1326 1600656 - 1601642 + | endonuclease IV Acid345_1327 1602447 - 1601701 - | methionine aminopeptidase, type I TERM 1231 1601760 - 1601772 + g 81 -9.1 -4.33417 | TGGTGTGCTCATAGT GCGCT GCC AGCGC TTTATTGTGCGTCGA Acid345_1328 1602517 - 1605087 + | leucyl-tRNA synthetase TERM 1232 1605205 - 1605217 + T 76 -3.3 -5.00884 | overlap 1605169 TTTACTAGCGATTTG CGGGA GGG TGCCG TTTTTTGGCAACGGT TERM 1233 1605232 - 1605244 + T 79 -3.3 -5.14563 | GTTTTTTGGCAACGG TCCAG CCC CCGGA TTTTTTCCTCAGAAC Acid345_1329 1605694 - 1605365 - | hypothetical protein Acid345_1330 1606379 - 1605741 - | hypothetical protein Acid345_1331 1607609 - 1606389 - | putative transcriptional regulator, CadC TERM 1234 1607095 - 1607121 + g 77 -13.6 -2.91264 | TGTGCGGCTTGTTGC GCCCGGCCGAGA GCC TCGCGGGCGGGC TGTGTACGTACACGA TERM 1235 1607868 - 1607906 + G 76 -12.5 -3.08798 | opp_overlap 1607857 1607862 1607861 1607885 TCAACAAAGGGTATC GCTTCGACACCGAGG AAGGCAGCG CCTCGCTGTCGGAGC TATTCCGTGGCCGCT Acid345_1332 1607705 - 1608523 + | protein of unknown function DUF899, thioredoxin-like Acid345_1333 1608710 - 1609510 + | protein of unknown function DUF899, thioredoxin-like Acid345_1334 1609870 - 1612113 + | hypothetical protein Acid345_1335 1614515 - 1612383 - | serine phosphatase TERM 1236 1613158 - 1613181 + g 78 -3.9 -5.02323 | gap 2, overlap 1613150 1613110 1613162 ACTTCCTGCGCGATG GC-GA-GCTCG CTTT CGAGCTTCTGC TTTTCTTTCTGCTCC Acid345_1336 1614803 - 1615777 + | hypothetical protein TERM 1237 1616218 - 1616242 + G 78 -8.5 -4.20868 | opp_overlap 1616205 GATTGGGCATGGCGT GTCGTCGTGCG CAA CGTGCGATGGC TTCTTCTTTTCCGGC Acid345_1337 1615823 - 1616758 + | thioredoxin reductase TERM 1238 1616773 - 1616799 + F 83 -7.2 -4.66609 | opp_overlap 1616778, overlap 1616778 ATCAACTTTTAATCC ACAGAGGCCGCA TGG TGCGGCCTTTAA TTTTTGCATCCGCTG TERM 1239 1616778 - 1616794 + F 100 -13.7 -4.33653 | opp_overlap 1616778, overlap 1616773 CTTTTAATCCACAGA GGCCGCA TGG TGCGGCC TTTAATTTTTGCATC TERM 1240 1616794 - 1616778 - f 81 -13.7 -2.94912 | opp_overlap 1616773 1616778 CTTTTAATCCACAGA GGCCGCA TGG TGCGGCC TTTAATTTTTGCATC TERM 1241 1617120 - 1617104 - g 78 -7.9 -4.42238 | overlap 1617106 GGACTGGAAGTAAAA GATGCCG TCG CGGCAGC GAAGAAGCTGAATGC TERM 1242 1617118 - 1617106 - g 72 -9.1 -3.81651 | overlap 1617104 ACTGGAAGTAAAAGA TGCCG TCG CGGCA GCGAAGAAGCTGAAT TERM 1243 1617698 - 1617682 - g 71 -10.9 -3.29381 | opp_overlap 1617697 TGAGAACATCATCAA CGAACTG AAA CAGTTCG CGAAGGCAGAGAGCA Acid345_1338 1616987 - 1617907 + | L-proline dehydrogenase Acid345_1339 1618001 - 1618855 + | hypothetical protein TERM 1244 1618885 - 1618867 - T 100 -13.1 -4.7373 | opp_overlap 1618866 TTAGCGCAGCAAAAA GCCCGGC ACTCG GCCGGGC GTTCCTAAAAGATAA Acid345_1340 1619812 - 1618904 - | hypothetical protein TERM 1245 1619191 - 1619214 + g 74 -6 -4.49311 | overlap 1619192 GCTGCTGCGGCGTCT TGCTGTTGAA CTGA TTCAACTGCG TTTTGTAGTGCTGCT Acid345_1341 1620352 - 1619861 - | hypothetical protein TERM 1246 1620293 - 1620309 + g 70 -12.3 -2.75064 | overlap 1620290 1620295 GTGCACCTCGGGCGC CAGCGGA GCT TCCGCTG TCATTAACTCGAACA Acid345_1342 1620957 - 1620361 - | ECF subfamily RNA polymerase sigma-24 factor TERM 1247 1621100 - 1621078 - H 71 -10.6 -3.17792 | overlap 1621076 1621071 AAGATGAACCCAACA TGACGGCGAA AGT TTCGCCCTCA AAAGGGATATCGCGA Acid345_1343 1621580 - 1623421 + | hypothetical protein TERM 1248 1624940 - 1624928 - g 78 -9.1 -4.14472 | opp_overlap 1624938, overlap 1624935 TGAAGAGCGCGAAAA GCGGA AAG TCCGC AAGACTTTCGAGCGT TERM 1249 1625761 - 1625784 + G 72 -8.8 -3.85698 | AGTTTCGAGTTTCGC CGCCATCGCG CGAT TGGGATGGCG TTTATACGACGAAGA Acid345_1344 1623432 - 1625816 + | adenylate/guanylate cyclase TERM 1250 1626131 - 1626120 - g 87 -7.2 -4.96848 | overlap 1626121 GTGCGCACAGAAAAA GGCG GACG CGCC CGCATTACGCTCAAC TERM 1251 1630181 - 1630160 - g 83 -7.9 -4.59773 | opp_overlap 1630170, overlap 1630163 CGTCACGTTGAAAAA CAACGGCGC AGTC GCGTCGTCG GCGACGACGGGCAAC TERM 1252 1630187 - 1630163 - g 76 -6.9 -4.41633 | opp_overlap 1630170, overlap 1630160 CACGTTGAAAAACAA CGGCGCAGTCG CGT CGTCGGCGACG ACGGGCAACCTGTTG TERM 1253 1630558 - 1630584 + G 83 -13.8 -3.53091 | opp_overlap 1630549 GAATCACCGGGCCGG GTTTCAGCGGTA CGG TACCGCTGACAC TTTCGACCACGGCGT Acid345_1345 1625898 - 1635263 + | hypothetical protein TERM 1254 1635270 - 1635295 + F 100 -15.4 -3.90112 | opp_overlap 1635267 1635266 1635270 GTGCAGTAAAATTCA GCGGCGCGGG CACAAA CTCGCGCCGC TTTCGTTCCAACCAA TERM 1255 1635295 - 1635270 - f 79 -13.9 -2.77781 | opp_overlap 1635270, overlap 1635267 1635266 GTGCAGTAAAATTCA GCGGCGCGGGC ACAA ACTCGCGCCGC TTTCGTTCCAACCAA TERM 1256 1635879 - 1635855 - g 78 -3.6 -5.0133 | gap 1 GAGCGCGGCAAAAAA GGCTGGAAG ATTGTGGA CTTCC-GCC CGCGCGATTTCTTCA Acid345_1346 1635348 - 1635902 + | hypothetical protein Acid345_1347 1636649 - 1635903 - | hypothetical protein Acid345_1348 1638328 - 1636670 - | hypothetical protein TERM 1257 1638627 - 1638602 - g 75 -10.5 -3.66018 | overlap 1638610 CCAGCAGCTCAATAA TGACGACATCG GCGC CAATGTCGCCA GCGGATCGTACCCGA Acid345_1349 1638384 - 1638977 + | 3-octaprenyl-4-hydroxybenzoate carboxy-lyase TERM 1258 1639206 - 1639248 + T 83 -14.3 -2.71011 | gap 1, opp_overlap 1639212, overlap 1639212 TCCCAACAGTACACC GGAAAAGGCTCGCCGCTGCT ACGC AGT-GTGGCGGGCCTTTTTC TCGTTGAAGCAAAAT TERM 1259 1639212 - 1639242 + T 100 -9.7 -4.98255 | gap 1, opp_overlap 1639212, overlap 1639206 CAGTACACCGGAAAA GGCTCGCCGCTGCT ACGC AGT-GTGGCGGGCC TTTTTCTCGTTGAAG Acid345_1350 1639730 - 1639290 - | NUDIX hydrolase Acid345_1351 1640285 - 1639740 - | hypothetical protein TERM 1260 1640874 - 1640863 - g 72 -5.8 -4.42238 | opp_overlap 1640863, overlap 1640865 GTACTTCAATCAAAA TGCC GAAT GGCA TTCGATCACGCTGCC Acid345_1352 1640300 - 1641025 + | hypothetical protein TERM 1261 1641283 - 1641293 + G 74 -6.8 -4.30576 | opp_overlap 1641264 AACCAAATACTGGAT CGCA CTC TGCG TTTTGCTGCTCGCGG Acid345_1353 1641254 - 1642327 + | hypothetical protein TERM 1262 1642365 - 1642346 - T 100 -13.6 -4.0802 | opp_overlap 1642346 ATCGGAAGAACTAAA GCCCATCC TGCG GGATGGGC TTTTTATTTATCTGG TERM 1263 1642346 - 1642365 + T 100 -13.6 -5.42975 | opp_overlap 1642346 ATCGGAAGAACTAAA GCCCATCC TGCG GGATGGGC TTTTTATTTATCTGG Acid345_1354 1644639 - 1642696 - | hypothetical protein TERM 1264 1644195 - 1644210 + g 70 -4 -4.68593 | gap 1, overlap 1644178 1644177 1644195 1644196 GCTGCAACTGCTGTT G-CACCA GGT TGGTGAC TTTTTCGGTCGTCAC Acid345_1355 1645725 - 1644835 - | LysR family transcriptional regulator Acid345_1356 1645812 - 1648070 + | catalase/peroxidase HPI TERM 1265 1648159 - 1648129 - f 93 -13.3 -3.78934 | gap 1, opp_overlap 1648129 TGTTTTGTAGAACAA TGCCGGTCG-CGTC TTTT GACGACGGCCGGCA TTTTCACGGATCCGT TERM 1266 1648129 - 1648159 + F 100 -15.5 -4.09864 | gap 1, opp_overlap 1648129 TGTTTTGTAGAACAA TGCCGGTCG-CGTC TTTT GACGACGGCCGGCA TTTTCACGGATCCGT Acid345_1357 1648184 - 1648459 + | hypothetical protein Acid345_1358 1648954 - 1648481 - | GCN5-related N-acetyltransferase TERM 1267 1649064 - 1649046 - R 100 -13.1 -5.64274 | overlap 1649034 TCAGGCACAAAAAAA GCGGCGC TCTTC GCGCCGC TGAGGTTGAGGGTAT Acid345_1359 1651806 - 1649086 - | glycoside hydrolase family protein TERM 1268 1649768 - 1649779 + g 70 -2.2 -4.72272 | TACGCAACGTGTACC GGTT CGCA AGCC TTTTTAGTGCCAAAG TERM 1269 1652048 - 1652036 - g 70 -2.7 -4.77165 | GGTCCCACAAGAAAA GAATC AAG AATTC CGGCCGTAGTTCCGA Acid345_1360 1652018 - 1652380 + | hypothetical protein TERM 1270 1652414 - 1652400 - T 72 -11.4 -3.06183 | GTCATCCTGAGCGAA GCGTGC GAA GCACGC GCAGTCGAAGGACCC Acid345_1361 1652917 - 1652468 - | hypothetical protein Acid345_1362 1654499 - 1653012 - | peptidase M28 TERM 1271 1654421 - 1654411 - G 84 -6.8 -4.79053 | AAAGAGCAAAACAAA GTGG GCA CCAC GAAAAGGCGCGCGAG Acid345_1363 1654614 - 1655093 + | hypothetical protein Acid345_1364 1655090 - 1656355 + | putative lipoprotein TERM 1272 1656371 - 1656400 + F 100 -15.1 -4.26903 | opp_overlap 1656377, overlap 1656372 1656377 TAAAGCGTATGTGCC TGAAAATGCCCGG TTTC CCGGGCATTTTCC TTTTCGTGCCATGCC TERM 1273 1656372 - 1656399 + F 100 -18.6 -3.1582 | opp_overlap 1656377, overlap 1656371 1656377 AAAGCGTATGTGCCT GAAAATGCCCGG TTTC CCGGGCATTTTC CTTTTCGTGCCATGC TERM 1274 1656394 - 1656377 - f 95 -12.7 -4.08216 | opp_overlap 1656372 1656371 1656377 GTATGTGCCTGAAAA TGCCCGG TTTC CCGGGCA TTTTCCTTTTCGTGC TERM 1275 1656377 - 1656394 + F 100 -12.7 -4.70319 | opp_overlap 1656377, overlap 1656372 1656371 GTATGTGCCTGAAAA TGCCCGG TTTC CCGGGCA TTTTCCTTTTCGTGC Acid345_1365 1656504 - 1657334 + | diguanylate cyclase Acid345_1366 1658931 - 1657456 - | von Willebrand factor, type A TERM 1276 1659031 - 1659014 - R 100 -12.7 -4.30014 | opp_overlap 1659014 1659013 CGGACTAAGGCAAAA GGCACGC CGGA GCGTGCC CTTTAGAACTAAGCA TERM 1277 1659014 - 1659031 + r 76 -12.7 -2.74144 | opp_overlap 1659014, overlap 1659013 CGGACTAAGGCAAAA GGCACGC CGGA GCGTGCC CTTTAGAACTAAGCA Acid345_1367 1660025 - 1659054 - | zinc-binding alcohol dehydrogenase Acid345_1368 1660385 - 1660035 - | hypothetical protein TERM 1278 1660430 - 1660408 - R 100 -14.9 -5.80364 | opp_overlap 1660400 AGGGTAACAAAAAAA TCCGCGGAG GGTGT CTCCGCGGA CTCTGAAGATTTGTA Acid345_1369 1661551 - 1660523 - | putative transmembrane protein TERM 1279 1661984 - 1662010 + G 73 -2.8 -4.73613 | overlap 1661986 TCCAAATGTTCTATC TCGCCGCGGTGA TGG TCTTCGGGGCAA TTTTCTTCGTCGTGA Acid345_1370 1661788 - 1662243 + | hypothetical protein Acid345_1371 1662393 - 1663805 + | hypothetical protein Acid345_1372 1663830 - 1664093 + | hypothetical protein Acid345_1373 1664237 - 1665388 + | AMP-dependent synthetase and ligase Acid345_1374 1665389 - 1666126 + | short-chain dehydrogenase/reductase SDR Acid345_1375 1666128 - 1667156 + | hypothetical protein Acid345_1376 1668115 - 1667186 - | meta-pathway phenol degradation protein Acid345_1377 1668999 - 1668166 - | bile acid/sodium symporter Acid345_1378 1670128 - 1669070 - | hypothetical protein Acid345_1379 1671497 - 1670154 - | hypothetical protein Acid345_1380 1672142 - 1671531 - | hypothetical protein TERM 1280 1672379 - 1672414 + r 73 -10.5 -3.37017 | gap 2, opp_overlap 1672377 1672382, overlap 1672381 CGAACGCGCAAAAGC GA-ACCGCCGGC-CTTC GCGA GAAGAGCCGGCGGCATC TTGATATTCAGCGTT TERM 1281 1672381 - 1672411 + r 78 -13.3 -2.54723 | gap 1, opp_overlap 1672377 1672382, overlap 1672379 AACGCGCAAAAGCGA ACCGCCGGC-CTTC GCGA GAAGAGCCGGCGGC ATCTTGATATTCAGC TERM 1282 1672410 - 1672382 - R 100 -16.8 -3.37091 | gap 1, opp_overlap 1672381 1672379, overlap 1672377 ACGCGCAAAAGCGAA CCGCCGGC-CTTC GCGA GAAGAGCCGGCGG CATCTTGATATTCAG Acid345_1381 1673919 - 1672429 - | aldehyde dehydrogenase (acceptor) Acid345_1382 1674521 - 1674030 - | hypothetical protein Acid345_1383 1674707 - 1675486 + | putative integral membrane protein TERM 1283 1676998 - 1676977 - g 79 -13.1 -3.20382 | GCGGAGATGCAGCAA GCTCTCGAA CGCA TTCGAGAGC TGAAAGCCGCCAGCC sdhA 1675471 - 1677297 + | succinate dehydrogenase flavoprotein subunit Acid345_1385 1677297 - 1678046 + | fumarate reductase iron-sulfur subunit Acid345_1386 1678056 - 1678586 + | hypothetical protein Acid345_1387 1683164 - 1678692 - | integrin-like protein TERM 1284 1680884 - 1680872 - G 72 -6.3 -4.4078 | CGGTTCCAATGAAAA TTCTC GCG GAGAA AGAGGGGGAAACCTG TERM 1285 1683611 - 1683599 - R 89 -3.4 -5.49729 | opp_overlap 1683599 AAGCACTTAAAAAAA GTTG TTAAC CAAC TTCTAACTTCGGGTT Acid345_1388 1685069 - 1683678 - | two component, sigma54 specific, Fis family transcriptional regulator TERM 1286 1683868 - 1683893 + g 74 -6.7 -4.51812 | opp_overlap 1683868, overlap 1683875 CCGTTGCCGCTGAAA CCCGCGACAGC AGCG GCTGCTGCAGG TTTGTTCTTCTGCCG Acid345_1389 1686822 - 1685170 - | signal transduction histidine kinase, nitrogen specific, NtrB Acid345_1390 1688139 - 1686925 - | type II secretion system protein TERM 1287 1688081 - 1688110 + g 75 -10 -3.63694 | gap 1, overlap 1688072 1688068 TTGTTTTCGGCGACA CGCTCGCCGGTGA CTTTC TCGCCGGTG-GCG TTCTTGCCAGTGAAT Acid345_1391 1689314 - 1688187 - | twitching motility protein Acid345_1392 1691089 - 1689374 - | type II secretion system protein E TERM 1288 1689568 - 1689556 - G 77 -10.5 -3.90318 | opp_overlap 1689555 1689556 CCATTACTTCATAAA GGCCG GTA CGGCC CTTATATCCCGTGTT TERM 1289 1690216 - 1690228 + g 72 -4.8 -4.56597 | TCTCTTTGTCGAGCA GTCG GAGAA CGAC TTTTTCGCCCCACAG TERM 1290 1690254 - 1690276 + g 70 -4.2 -4.58585 | gap 1 CACAGGGTAGGCAGG GTGCT-GAC GCGATA GTCGAGCAC TTTCTTCTTTCCCTG TERM 1291 1690495 - 1690515 + g 70 -11.9 -2.73994 | TGTCGCTGGCGCCCT TCTTCACGG CTT CCGTGAGGA TCATGTTCACCAGCT TERM 1292 1691993 - 1692007 + H 77 -11.4 -3.58801 | overlap 1691983 GCAGTGCCGGTGATT CCCGGA AAG TCCGGG TTTCGCGCCTTCTGT TERM 1293 1692730 - 1692742 + G 71 -6.9 -4.20531 | opp_overlap 1692712 1692709 1692711 CCGTCACGAGGCGAC GCTGC AGG GCGGC TTTTCCGTGGCTCTG Acid345_1393 1692161 - 1694431 + | multi-sensor signal transduction histidine kinase Acid345_1394 1694409 - 1695761 + | two component, sigma54 specific, Fis family transcriptional regulator Acid345_1395 1695763 - 1696629 + | ABC peptide transporter, inner membrane subunit Acid345_1396 1696780 - 1697112 + | hypothetical protein TERM 1294 1697131 - 1697166 + T 95 -14.7 -3.57144 | overlap 1697134 1697137 AAATTTCAACGCTGG CGACGAGGCCCCACC GGGGAG GGTGGGGCCTTGGTG TTTACCCCTGCCACG TERM 1295 1697134 - 1697163 + T 90 -17.2 -2.61695 | overlap 1697131 1697137 TTTCAACGCTGGCGA CGAGGCCCCACC GGGGAG GGTGGGGCCTTG GTGTTTACCCCTGCC TERM 1296 1697137 - 1697160 + T 95 -15.3 -3.45839 | overlap 1697134 1697131 CAACGCTGGCGACGA GGCCCCACC GGGGAG GGTGGGGCC TTGGTGTTTACCCCT Acid345_1397 1697581 - 1697168 - | PilT protein-like Acid345_1398 1697862 - 1697581 - | prevent-host-death protein Acid345_1399 1698005 - 1698508 + | hypothetical protein Acid345_1400 1698524 - 1699138 + | hypothetical protein Acid345_1401 1699150 - 1700061 + | hypothetical protein Acid345_1402 1700125 - 1701594 + | flotillin TERM 1297 1701629 - 1701601 - f 71 -10.3 -3.23853 | gap 1, opp_overlap 1701602 1701603, overlap 1701599 1701603 1701604 GGGGCGTAACGAACA CACGCGCGGAGG TGCGAG CCTCCGCGCA-G CTTTGCAGAAGCCGC TERM 1298 1701628 - 1701603 - f 95 -14 -3.18366 | opp_overlap 1701602 1701603, overlap 1701601 1701599 1701604 GGCGTAACGAACACA CGCGCGGAGG TGCGAG CCTCCGCGCA GCTTTGCAGAAGCCG TERM 1299 1701603 - 1701629 + F 72 -12.3 -2.71712 | gap 1, opp_overlap 1701603 1701601 1701599 1701604, overlap 1701602 GGCGTAACGAACACA C-GCGCGGAGGT GCGA GCCTCCGCGCAG CTTTGCAGAAGCCGC TERM 1300 1701627 - 1701604 - f 83 -15.3 -2.50699 | opp_overlap 1701603 1701602, overlap 1701603 1701601 1701599 GCGTAACGAACACAC GCGCGGAGG TGCGAG CCTCCGCGC AGCTTTGCAGAAGCC Acid345_1403 1701864 - 1702532 + | phage shock protein A, PspA TERM 1301 1702574 - 1702538 - f 74 -11.6 -3.28708 | gap 1, opp_overlap 1702565 1702567, overlap 1702540 1702565 1702566 GAAAGCGTAGATCAA CACCCCACCC-TGTCCG CCAT CGGATAAGGGTGGGGCA CCACTCTGTTGACGC TERM 1302 1702572 - 1702540 - f 95 -14.2 -3.20345 | gap 1, opp_overlap 1702565 1702567, overlap 1702538 1702565 1702566 AAGCGTAGATCAACA CCCCACCC-TGTCCG CCAT CGGATAAGGGTGGGG CACCACTCTGTTGAC TERM 1303 1703012 - 1703033 + G 72 -9.3 -3.74872 | opp_overlap 1703006 1703013, overlap 1703013 AGTGGACAAGTGAAG AGCGCCGCG AAGG TGCGGCGCG TTTCATCCAATACCT TERM 1304 1703013 - 1703032 + G 73 -12.8 -2.84602 | opp_overlap 1703006 1703013, overlap 1703012 GTGGACAAGTGAAGA GCGCCGCG AAGG TGCGGCGC GTTTCATCCAATACC TERM 1305 1703032 - 1703013 - g 75 -12.1 -3.18054 | opp_overlap 1703013 1703012, overlap 1703006 GTGGACAAGTGAAGA GCGCCGC GAAGGT GCGGCGC GTTTCATCCAATACC Acid345_1404 1702615 - 1703067 + | hypothetical protein Acid345_1405 1703991 - 1703071 - | hypothetical protein TERM 1306 1703896 - 1703874 - G 75 -8.5 -4.07568 | TGCCGTCTTTCAAAA GTTCGCGAA CCTGT TTCACGAAC GCTGGAGCGTTGTCC Acid345_1406 1705413 - 1704034 - | hypothetical protein TERM 1307 1705488 - 1705461 - g 90 -7 -5.06414 | gap 1, opp_overlap 1705479 TGGGGCGAAGAAAAA GCG-GAAGCGGAA CTT TTCCACTGCTCGC GGTGTTTATATCTAT TERM 1308 1705862 - 1705849 - g 77 -8.1 -4.36914 | TGCTGCCGGAGAAAA CGTCG CCTA CGACG CCAACGTCCAGCACG Acid345_1407 1705445 - 1706353 + | Allergen V5/Tpx-1 related TERM 1309 1706386 - 1706358 - T 89 -8.8 -4.65895 | opp_overlap 1706358 1706357 1706359, overlap 1706360 CGCTCTACTGAAAAA GAGAGGGACGCA GAAGA TGCGTCCCTCGT GCATTTGATTATCCA TERM 1310 1706359 - 1706385 + T 72 -12.3 -2.72436 | opp_overlap 1706358 1706360, overlap 1706358 1706357 GCTCTACTGAAAAAG AGAGGGACGCA GAAGA TGCGTCCCTCG TGCATTTGATTATCC TERM 1311 1706384 - 1706360 - T 100 -15.8 -3.94812 | opp_overlap 1706359 1706358 1706357, overlap 1706358 CTCTACTGAAAAAGA GAGGGACGCA GAAGA TGCGTCCCTC GTGCATTTGATTATC Acid345_1408 1706802 - 1706527 - | hypothetical protein Acid345_1409 1707037 - 1707486 + | 4-hydroxybenzoyl-CoA thioesterase Acid345_1410 1707483 - 1709033 + | histidine ammonia-lyase Acid345_1411 1709262 - 1710152 + | hypothetical protein TERM 1312 1710175 - 1710192 + T 100 -12.7 -4.79352 | opp_overlap 1710172 1710175 ACCACTCGAGAATCA GGCCGGA GCAA TCCGGCC TTTTCTTATGCCTGC TERM 1313 1710192 - 1710175 - T 76 -12.7 -2.84 | opp_overlap 1710175, overlap 1710172 ACCACTCGAGAATCA GGCCGGA GCAA TCCGGCC TTTTCTTATGCCTGC Acid345_1412 1710773 - 1710198 - | metal dependent phosphohydrolase TERM 1314 1710634 - 1710616 - G 72 -6.7 -4.4078 | TTCTCGTAATCAAAA TCGTGGA TAAGC CCCACGA TCCCCCACTTGTTTT Acid345_1413 1711023 - 1711970 + | hypothetical protein TERM 1315 1712021 - 1711998 - f 71 -9.5 -3.57144 | opp_overlap 1711998 CGGTGCATTCCCAAA CGGCGCTAG CACGAT CTGGCGCCG TTTTCTTGTGATATT TERM 1316 1711998 - 1712021 + F 100 -11.7 -4.83722 | opp_overlap 1711998 CGGTGCATTCCCAAA CGGCGCTAG CACGAT CTGGCGCCG TTTTCTTGTGATATT TERM 1317 1712244 - 1712220 - f 70 -9.4 -3.74224 | gap 1, overlap 1712214 TGCAAAGTACGCAAA GCTACTTCACG AAAT CGTGA-GTAGC TGGAGATGTTCCCAG Acid345_1414 1712282 - 1712821 + | XRE family transcriptional regulator TERM 1318 1712858 - 1712887 + T 84 -13.7 -3.06515 | opp_overlap 1712863, overlap 1712863 CCCAATAGTCCACGA GAAAAGCCAAGGC GACG GCCTTGGCTTTTA CTTTTGGAAATCAAA TERM 1319 1712882 - 1712863 - T 100 -13.6 -4.46926 | opp_overlap 1712858 1712863 TAGTCCACGAGAAAA GCCAAGGC GACG GCCTTGGC TTTTACTTTTGGAAA TERM 1320 1712863 - 1712882 + T 100 -13.6 -4.67038 | opp_overlap 1712863, overlap 1712858 TAGTCCACGAGAAAA GCCAAGGC GACG GCCTTGGC TTTTACTTTTGGAAA Acid345_1415 1715617 - 1713002 - | TonB-dependent receptor TERM 1321 1715420 - 1715432 + g 76 -4.7 -4.77036 | overlap 1715398 1715421 CGCCTTGGCCGTGTA GCCGG TCA CCGGG TTTTTGATCGTGACC Acid345_1416 1715988 - 1715674 - | hypothetical protein Acid345_1417 1716195 - 1716998 + | undecaprenyl pyrophosphate synthetase Acid345_1418 1717002 - 1717925 + | phosphatidate cytidylyltransferase TERM 1322 1718175 - 1718141 - f 79 -7.9 -4.49556 | GTTTCAGGAAAGAAA TCACGGGGCAAAA CCGTCAATT TTGTGCCCCGCGA AAATACTGCCTCCGC Acid345_1419 1718510 - 1719766 + | 1-deoxy-D-xylulose 5-phosphate reductoisomerase TERM 1323 1721025 - 1721042 + G 71 -6.9 -4.24745 | opp_overlap 1721025 ATGCGAATCAAGGAA CGCGCCT ATCA AGTCGCG TTTGTCTTCCTGATG Acid345_1420 1719789 - 1721129 + | peptidase M50, putative membrane-associated zinc metallopeptidase TERM 1324 1721179 - 1721150 - T 100 -17.9 -4.4009 | opp_overlap 1721151 1721154, overlap 1721151 TTCCAGCGCAGAAAA CGAAGGGCACGGC TTTG GCCGTGCCCTTCT TACATGGAGGAGTCT TERM 1325 1721178 - 1721151 - T 100 -21.4 -3.23733 | opp_overlap 1721151 1721154, overlap 1721150 TCCAGCGCAGAAAAC GAAGGGCACGGC TTTG GCCGTGCCCTTC TTACATGGAGGAGTC TERM 1326 1721151 - 1721178 + T 100 -21.4 -3.05596 | opp_overlap 1721151 1721150, overlap 1721154 TCCAGCGCAGAAAAC GAAGGGCACGGC TTTG GCCGTGCCCTTC TTACATGGAGGAGTC TERM 1327 1721154 - 1721175 + T 100 -17.3 -3.67597 | opp_overlap 1721151 1721150, overlap 1721151 AGCGCAGAAAACGAA GGGCACGGC TTTG GCCGTGCCC TTCTTACATGGAGGA Acid345_1421 1721665 - 1721228 - | response regulator receiver protein TERM 1328 1721564 - 1721587 + g 83 -13.8 -3.62096 | TTCGGCGCTGAGGGC GCCTGCCGCG AAGT CGCGGAAGGC TTTGAAGTCGTCCAC Acid345_1422 1722435 - 1721719 - | cyclic nucleotide-binding protein ispG 1722575 - 1723816 + | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase TERM 1329 1723821 - 1723858 + T 100 -24.4 -3.89055 | opp_overlap 1723827 TCGGCGTTTAAGTTC CACGAAGGCGCAGAGA AACGAA TCTCTGCGCCTTCGTG TTTCTGCCGATCTAT TERM 1330 1723852 - 1723827 - T 95 -14.8 -3.16742 | opp_overlap 1723821 TTTAAGTTCCACGAA GGCGCAGAGA AACGAA TCTCTGCGCC TTCGTGTTTCTGCCG Acid345_1424 1724337 - 1723870 - | glyoxalase/bleomycin resistance protein/dioxygenase Acid345_1425 1725306 - 1724491 - | AraC family transcriptional regulator TERM 1331 1725401 - 1725369 - R 84 -12.8 -3.4285 | gap 1, opp_overlap 1725373 1725376 1725377, overlap 1725375 CGATTCAACTCACAA GCAAAAGGCGCGGCA GGTT CGCCGCGC-TTCTGC TGCGTCGCTTCGTTG TERM 1332 1725396 - 1725375 - R 85 -9.3 -4.50661 | opp_overlap 1725373 1725376 1725377, overlap 1725369 AACTCACAAGCAAAA GGCGCGGCA GGTT CGCCGCGCT TCTGCTGCGTCGCTT TERM 1333 1725376 - 1725395 + r 80 -12.1 -3.42699 | opp_overlap 1725375 1725369, overlap 1725373 1725377 ACTCACAAGCAAAAG GCGCGGC AGGTTC GCCGCGC TTCTGCTGCGTCGCT Acid345_1426 1726439 - 1725657 - | enoyl-CoA hydratase/isomerase TERM 1334 1726840 - 1726867 + r 76 -12 -3.01712 | opp_overlap 1726845, overlap 1726845 GTCAACGTGGTGACA GGGAAGCGGCCT AACC GGGCCGCTTTTC TATTGCGGGGAACCA TERM 1335 1726845 - 1726862 + r 95 -10.5 -4.66537 | opp_overlap 1726845, overlap 1726840 CGTGGTGACAGGGAA GCGGCCT AACC GGGCCGC TTTTCTATTGCGGGG Acid345_1427 1727739 - 1726867 - | hydroxymethylglutaryl-CoA lyase Acid345_1428 1729457 - 1727739 - | propionyl-CoA carboxylase TERM 1336 1728696 - 1728710 + g 74 -11.4 -3.61715 | GATCTGCGAGTGCAT CTCGGC GCC GCCGAG TTCTTCCGCGGAATA Acid345_1429 1730038 - 1729505 - | heat shock protein DnaJ-like Acid345_1430 1730645 - 1730070 - | enoyl-CoA hydratase/isomerase TERM 1337 1730220 - 1730183 - G 82 -6.1 -4.82901 | overlap 1730211 CTGCCGTTAGAAAAA TCTCCATCGCCTGTGCG CAGC CGACCAAGCGTGGGAGA CGCTGGGTGCCGCCC Acid345_1431 1731373 - 1730642 - | hypothetical protein Acid345_1432 1731802 - 1731380 - | methylmalonyl-CoA mutase Acid345_1433 1732417 - 1731938 - | hypothetical protein TERM 1338 1732598 - 1732581 - R 100 -14.1 -4.22407 | opp_overlap 1732581, overlap 1732574 GACGAAAACCACAAA CGCGGCC CGCA GGCCGCG TTTTCCCTTTGCAGA TERM 1339 1732581 - 1732598 + r 100 -14.1 -4.35524 | opp_overlap 1732581 1732574 GACGAAAACCACAAA CGCGGCC CGCA GGCCGCG TTTTCCCTTTGCAGA Acid345_1434 1733039 - 1732620 - | peptidoglycan binding domain-containing protein TERM 1340 1733301 - 1733326 + r 78 -11.8 -3.21099 | opp_overlap 1733302, overlap 1733302 CGGCCAGTAAACGAA ACGGCCCGCA CCGAAA TGCGGGCCGC TTGATGGTAAGCAAG TERM 1341 1733302 - 1733325 + r 83 -15.3 -2.52516 | opp_overlap 1733302, overlap 1733301 GGCCAGTAAACGAAA CGGCCCGCA CCGAAA TGCGGGCCG CTTGATGGTAAGCAA TERM 1342 1733325 - 1733302 - R 100 -16 -4.10552 | opp_overlap 1733302 1733301 GGCCAGTAAACGAAA CGGCCCGCAC CGAA ATGCGGGCCG CTTGATGGTAAGCAA Acid345_1435 1734986 - 1733349 - | peptidase S1C, Do Acid345_1436 1736151 - 1735246 - | DMT family permease Acid345_1437 1737060 - 1736272 - | hypothetical protein Acid345_1438 1737989 - 1737057 - | ABC transporter, ATPase subunit TERM 1343 1737208 - 1737182 - G 77 -12.3 -3.53224 | gap 1 GATTCTCGGGCGAAA CCGACGGCACGC AAAT GCG-ACCGTCGG CGAAGTGGGCGTCGG Acid345_1439 1738111 - 1738557 + | hypothetical protein Acid345_1440 1738557 - 1738793 + | XRE family transcriptional regulator Acid345_1441 1740695 - 1738944 - | amidohydrolase 3 TERM 1344 1739079 - 1739089 + g 71 -6.8 -4.20918 | overlap 1739070 GCCGGGGGCGATCCT GCCT TTT AGGC TTTCTTCGAATTGCG TERM 1345 1740402 - 1740414 + g 83 -7.7 -4.6902 | CTGGCCTTTGAGGTC GACCA GGG TGGTC TTTTTGCCCTTGTAG Acid345_1442 1741961 - 1740708 - | peptidase M20 Acid345_1443 1743808 - 1742240 - | succinate-semialdehyde dehydrogenase (NAD(P)+) TERM 1346 1743376 - 1743365 - G 76 -4.4 -4.73864 | overlap 1743369 GGAAGGAATAGAAAA TGGA TAGT TCCA CGGGGAAATAATTCC Acid345_1444 1744657 - 1743884 - | tRNA pseudouridine synthase A Acid345_1445 1744883 - 1746955 + | outer membrane efflux protein TERM 1347 1746979 - 1746996 + F 100 -12.7 -5.07652 | opp_overlap 1746979 TTCGTTATGAAGGAA TCCCGGC TTCG GCCGGGA TTTTCTTTTGGGCAA TERM 1348 1746996 - 1746979 - f 84 -12.7 -3.39895 | opp_overlap 1746979 TTCGTTATGAAGGAA TCCCGGC TTCG GCCGGGA TTTTCTTTTGGGCAA TERM 1349 1747199 - 1747187 - g 89 -6.3 -5.04601 | opp_overlap 1747187, overlap 1747189 GCGACAAAGTAAAAA TCTTC CAG GAAGA GTGGAAGGGTTTCGC Acid345_1446 1747027 - 1747869 + | glycosyl transferase family protein Acid345_1447 1748815 - 1747862 - | hypothetical protein TERM 1350 1748554 - 1748574 + g 83 -5.4 -5.00884 | gap 1, overlap 1748567 GAACCAGGTCAATCT TGGCGG-GT AACT GCGCCGCCA TTTTTTGGACGACGT TERM 1351 1748874 - 1748860 - R 75 -7.1 -4.43477 | TTGAGGGAACCAAAA TCCCC GGACT GGGGA GTAACTCTAGAGCTA Acid345_1448 1750352 - 1748934 - | serine phosphatase Acid345_1449 1750443 - 1751696 + | phosphodiesterase I Acid345_1450 1752097 - 1751702 - | hypothetical protein TERM 1352 1752313 - 1752303 - g 79 -6.8 -4.59773 | TTCGATCTTTAAAAA TGCG CGA CGCA TTGGGGAACTCCACG Acid345_1451 1752205 - 1752678 + | 3-demethylubiquinone-9 3-methyltransferase TERM 1353 1752686 - 1752712 + T 100 -13 -4.47217 | overlap 1752687 AGTCCTAGGCGGGGT TGCGGGGAGC AATCGAC GCTCCCCGCG TTTTGGTTACTGCTT TERM 1354 1752687 - 1752711 + T 95 -14.3 -3.27246 | overlap 1752686 GTCCTAGGCGGGGTT GCGGGGAGC AATCGAC GCTCCCCGC GTTTTGGTTACTGCT Acid345_1452 1753183 - 1752719 - | hypothetical protein TERM 1355 1752824 - 1752847 + g 70 -4.5 -4.44667 | overlap 1752826 CGAGATTTCGATCGT GCCGGAGAG AGTGAC CTTTCCGCC TTTCTTATTGGCGAG Acid345_1453 1755332 - 1753311 - | multi-sensor signal transduction histidine kinase TERM 1356 1753884 - 1753910 + g 82 -6.5 -4.72272 | opp_overlap 1753887, overlap 1753889 1753890 ATTGATGTCGTCATG CAATTCGCGCG CGATT CGCGCGCATTC TTTTTCCTGGGCCGC TERM 1357 1753889 - 1753907 + g 93 -11.6 -4.47707 | opp_overlap 1753887, overlap 1753884 1753890 TGTCGTCATGCAATT CGCGCGCG ATT CGCGCGCA TTCTTTTTCCTGGGC TERM 1358 1753890 - 1753906 + g 87 -15.1 -3.27901 | opp_overlap 1753887, overlap 1753889 1753884 GTCGTCATGCAATTC GCGCGCG ATT CGCGCGC ATTCTTTTTCCTGGG TERM 1359 1755090 - 1755069 - G 72 -6.5 -4.30719 | gap 1, overlap 1755071 CGGTGTGAGAAGAAA CG-CGCTGAG GAG CACAGCGTCG GGCAGCCAGAAAGGG TERM 1360 1755525 - 1755513 - g 78 -9.1 -4.11346 | overlap 1755515 1755516 AGATTTAAAGAAGAA GACCG ATT CGGTC GCCGAGTCGCCGTCG TERM 1361 1756785 - 1756803 + G 70 -12.4 -2.77899 | opp_overlap 1756781 1756784, overlap 1756783 CGTCGCGAACACCAT CGATCCGC TGG GCGGGTCG TACTTCGTGGAGAAG Acid345_1454 1755493 - 1757292 + | methylmalonyl-CoA mutase Acid345_1455 1757315 - 1759780 + | serine/threonine protein kinase Acid345_1456 1759790 - 1760188 + | glyoxalase/bleomycin resistance protein/dioxygenase Acid345_1457 1760202 - 1760522 + | hypothetical protein TERM 1362 1760542 - 1760568 + T 73 -10.9 -3.35597 | opp_overlap 1760542 1760547, overlap 1760547 GTTTTGGTAGAGTAA GAAAAGCCCGC ACGCA GCGGGCTTTTG TATTTCCGGGATGGA TERM 1363 1760568 - 1760542 - T 71 -10.9 -3.25823 | opp_overlap 1760542 1760547, overlap 1760547 GTTTTGGTAGAGTAA GAAAAGCCCGC ACGCA GCGGGCTTTTG TATTTCCGGGATGGA TERM 1364 1760547 - 1760563 + T 100 -10.8 -4.78848 | opp_overlap 1760542 1760547, overlap 1760542 GGTAGAGTAAGAAAA GCCCGC ACGCA GCGGGC TTTTGTATTTCCGGG TERM 1365 1760563 - 1760547 - T 100 -10.8 -4.75472 | opp_overlap 1760547 1760542, overlap 1760542 GGTAGAGTAAGAAAA GCCCGC ACGCA GCGGGC TTTTGTATTTCCGGG Acid345_1458 1761803 - 1760589 - | aminotransferase TERM 1366 1760817 - 1760802 - G 76 -11.8 -3.33261 | opp_overlap 1760811 CGGGAAGGCGTAGAA CGCGCC CTTC GGCGCG ACCAGGTTGACGCGC TERM 1367 1760867 - 1760879 + g 76 -4.7 -4.8622 | CTTTTGTGACCTTGG CGCGC GCT GCGAG TTTTTCATTCACCCA TERM 1368 1761910 - 1761884 - R 100 -12.3 -4.9448 | opp_overlap 1761881 1761884 AGCGAGCAAAGAAAA TGCGGCCAGCT TTGTG AGCCGACCGCA TGATATTCATCGGGC Acid345_1459 1763445 - 1761928 - | aldehyde dehydrogenase TERM 1369 1764283 - 1764320 + G 73 -11.9 -3.05384 | gap 1 TCGGAAGTGCGCGTG GCGGGCGCATCCGCGCGC CTG GCGC-CGGAATCGTCTGC TTCGGTCAAGAGCGA Acid345_1460 1763740 - 1765029 + | fibronectin, type III TERM 1370 1766208 - 1766197 - g 71 -7.2 -4.16016 | opp_overlap 1766197, overlap 1766180 GCATTCGCGAAGAAA CCGG GCTG CCGG TTTCCATCGCGGACG Acid345_1461 1765239 - 1766303 + | rod shape-determining protein MreB TERM 1371 1766307 - 1766334 + F 72 -11.2 -3.08211 | opp_overlap 1766307, overlap 1766304 TCGATTGAGTAGATA CTGGGGCGCGGA GCCA TCCGCGCCCAAA TCGTTTTCCGCGAGT TERM 1372 1766334 - 1766307 - f 81 -13.4 -2.95298 | opp_overlap 1766307 1766304 TCGATTGAGTAGATA CTGGGGCGCGGA GCCA TCCGCGCCCAAA TCGTTTTCCGCGAGT Acid345_1462 1766363 - 1767442 + | rod shape-determining protein MreC TERM 1373 1767509 - 1767535 + G 75 -3.7 -4.84017 | gap 1 GCTTCAGTTGGCCGG TTGCGATC-GTG GCGC CGCTGCTCGCAA TTTTTCTCCAGGCTT Acid345_1463 1767439 - 1767969 + | hypothetical protein Acid345_1464 1767997 - 1769682 + | gamma-glutamyltransferase 2 TERM 1374 1769753 - 1769742 - f 71 -5.8 -4.371 | overlap 1769744 CGCATTAGACTAAAA TCGG AATA CCGA TCCCAAGTTGCCTCC Acid345_1465 1769828 - 1771903 + | peptidoglycan glycosyltransferase Acid345_1466 1771900 - 1772991 + | rod shape-determining protein RodA TERM 1375 1773865 - 1773847 - g 88 -11.6 -4.11484 | overlap 1773812 1773848 CCCAAGCCGGGAAAA TCGCCGCG AGC CGCGGCGC AATCGTGAGGAGCGC TERM 1376 1773864 - 1773848 - g 85 -15.1 -3.06569 | overlap 1773812 1773847 CCAAGCCGGGAAAAT CGCCGCG AGC CGCGGCG CAATCGTGAGGAGCG TERM 1377 1773965 - 1773951 - g 72 -5.6 -4.4634 | overlap 1773953 AAGCTGAAGAAGAAA CTGAGG AAG CCTCTG TCGAAACCGCGGGAA Acid345_1467 1773461 - 1776556 + | ribonuclease TERM 1378 1776599 - 1776579 - f 71 -10.3 -3.17571 | opp_overlap 1776580 AACTGTTTAACTGAA CGCCGGGCC GCA AGCCCGGCT TTTTTTGTTTTTCTG TERM 1379 1776580 - 1776598 + F 100 -13.1 -6.23317 | opp_overlap 1776579 ACTGTTTAACTGAAC GCCGGGC CGCAA GCCCGGC TTTTTTTGTTTTTCT Acid345_1468 1777185 - 1777421 + | excisionase/Xis, DNA-binding Acid345_1469 1777433 - 1778485 + | type IV pilus assembly protein PilM Acid345_1470 1778482 - 1779060 + | fimbrial assembly protein Acid345_1471 1779075 - 1779698 + | hypothetical protein TERM 1380 1779874 - 1779863 - g 76 -4.4 -4.8622 | overlap 1779867 GCCCGCAACCAAAAA GAAG TCTT CTTC AAAGAAATCCGCGGC Acid345_1472 1779711 - 1780271 + | hypothetical protein TERM 1381 1780895 - 1780933 + G 79 -13.1 -3.21416 | gap 1, opp_overlap 1780894, overlap 1780914 CGGGCGGGGAAGTAG CGGCTGCGGCT-CCGGTG AGGG CACCGGCAGCAGCGCCCG TTGCTCCTGCGCCTG Acid345_1473 1780498 - 1782924 + | type II and III secretion system protein TERM 1382 1782942 - 1782963 + F 100 -17.3 -5.28942 | opp_overlap 1782925 AGCTCTGCTTCCGAC GCCGGGCGA GCAA TCGCCCGGC TTTTTCTTTGCCGTG Acid345_1474 1782994 - 1784331 + | amino acid transporter Acid345_1475 1784328 - 1785419 + | aminotransferase Acid345_1476 1785520 - 1787112 + | EmrB/QacA family drug resistance transporter Acid345_1477 1788310 - 1787402 - | LysR family transcriptional regulator Acid345_1478 1789223 - 1788381 - | pyrroline-5-carboxylate reductase Acid345_1479 1790216 - 1789269 - | homoserine kinase TERM 1383 1789686 - 1789649 - G 71 -10.5 -3.53224 | gap 1, opp_overlap 1789649 1789648 CATCGTGTCGCGAAA CTC-TCTCCGGCAGCACG CTC CGCGCTGCCGACGTCGAG AGATTGTATTCGGGT Acid345_1480 1791439 - 1790213 - | L-threonine synthase Acid345_1481 1792743 - 1791448 - | homoserine dehydrogenase Acid345_1482 1794153 - 1792744 - | aspartate kinase III TERM 1384 1793972 - 1794000 + g 83 -13.8 -3.57144 | TTCCATAGCTTCAGC GCCGCCGCGAGG TCACC CTTCGCCGCGGC TTTGCCCATCGCCAC TERM 1385 1794185 - 1794211 + r 76 -8.7 -4.02253 | gap 1, opp_overlap 1794185 GCCGAAAACAGAAAA CCCACCTACCCT GCTT AGGGC-GGTGGG TTTGTAAGTTCTTGA TERM 1386 1794211 - 1794185 - R 100 -10.9 -4.89567 | gap 1, opp_overlap 1794185 GCCGAAAACAGAAAA CCCACCTACCCT GCTT AGGGC-GGTGGG TTTGTAAGTTCTTGA Acid345_1483 1795382 - 1794417 - | malate dehydrogenase (NAD) TERM 1387 1795410 - 1795432 + r 93 -13.4 -3.91897 | opp_overlap 1795411, overlap 1795411 ACCATCGAAAAGAAA AGCCGGAGCT TTA AGCTCCGGCC TTTGTGAATGACGAA TERM 1388 1795411 - 1795431 + r 93 -16.9 -2.94924 | opp_overlap 1795411, overlap 1795410 CCATCGAAAAGAAAA GCCGGAGCT TTA AGCTCCGGC CTTTGTGAATGACGA TERM 1389 1795431 - 1795411 - R 100 -16.9 -5.10933 | opp_overlap 1795410 1795411 CCATCGAAAAGAAAA GCCGGAGCT TTA AGCTCCGGC CTTTGTGAATGACGA Acid345_1484 1798840 - 1795454 - | hypothetical protein TERM 1390 1800275 - 1800286 + G 71 -7.2 -4.20367 | TGCTCTTTTCGCTGC CGGG AACA CCCG TTGTTTATTACGGCG TERM 1391 1800547 - 1800567 + G 74 -6.1 -4.55295 | opp_overlap 1800543 ACGCAATTCAAGGCC TTCGGCCGT GGC ACGCTCGAA TTTCTTTATCCCAGC Acid345_1485 1799167 - 1802493 + | trehalose synthase-like TERM 1392 1803845 - 1803793 - g 87 -14.9 -3.41051 | overlap 1803794 CGACCGCGAGCACAA CGACGCCGCAGCCTATTTCGGCG TCACCCT CGACGAAATGGACCGCAGCGTCA ACTGGATATACATCC TERM 1393 1803844 - 1803794 - g 84 -16.2 -2.64416 | overlap 1803793 GACCGCGAGCACAAC GACGCCGCAGCCTATTTCGGCG TCACCCT CGACGAAATGGACCGCAGCGTC AACTGGATATACATC Acid345_1486 1802522 - 1804051 + | 4-alpha-glucanotransferase Acid345_1487 1804101 - 1804586 + | hypothetical protein TERM 1394 1804687 - 1804674 - T 73 -5.3 -4.57073 | CAGGCTGCTGAAAAA CTCTT TTCG AAGAG GCTCTGTATCAGGGC TERM 1395 1804739 - 1804727 - T 91 -7.7 -5.0133 | opp_overlap 1804716 CAGGCTGCTAAAAAA CTTCG TTT CGAAG CAGGTTTGTATCAGG Acid345_1488 1807421 - 1804800 - | UTP-GlnB (protein PII) uridylyltransferase, GlnD Acid345_1489 1807734 - 1807393 - | nitrogen regulatory protein P-II (GlnB, GlnK) Acid345_1490 1809182 - 1807764 - | ammonium transporter Acid345_1491 1809398 - 1811434 + | PgPepO oligopeptidase TERM 1396 1811453 - 1811473 + F 100 -14.7 -4.05446 | opp_overlap 1811450 1811448 1811453 TATCAGCAGAGATCA GGGCCGGAG CAA TTCCGGCCC TTTCTCATTCCCGAA TERM 1397 1811473 - 1811453 - f 83 -14 -2.71744 | opp_overlap 1811453, overlap 1811450 1811448 TATCAGCAGAGATCA GGGCCGGA GCAAT TCCGGCCC TTTCTCATTCCCGAA TERM 1398 1814424 - 1814400 - g 79 -5.5 -4.87133 | AGCCTGCAAAGAAAA CGGTCGAGGTC ACC GACGACGGCCG CAAACTTCCGGCCGA Acid345_1492 1811615 - 1815223 + | alpha amylase TERM 1399 1815322 - 1815303 - T 89 -13.6 -3.65425 | GCGACACACGTGAAA GGCACGAC TTTA GTCGTGCC GTAACCGCCAAAAAA Acid345_1493 1816658 - 1815360 - | amidase TERM 1400 1816701 - 1816683 - R 100 -13.1 -4.40003 | opp_overlap 1816678 TCCCACAAATACAAA GGGCGCC TGTGC GGCGCCC TCGTGGTGAATTGTG Acid345_1494 1818472 - 1816724 - | putative GAF sensor protein TERM 1401 1817197 - 1817155 - G 73 -11 -3.32844 | opp_overlap 1817154 1817163 1817194 GTGCGGAGCCTACAA CCAGCGGAGCGGCTGCCGGC TTC GCCTGCTGCTGCTCTTCCGG CTTGCTGGCGGTCGT TERM 1402 1817755 - 1817791 + g 75 -12.1 -3.19522 | GAGCGGCGGCAACTG GCATCGGAGCAGGCGCC GGC GGGGCCAGCTTCGGAGC TTCAATCTTCGGTGC TERM 1403 1818735 - 1818701 - g 71 -7 -4.11585 | overlap 1818702 ATCCACGACAAAGAA CTGCAGATCGAGGCGC TAC GCGCCCAGATCGCCAA ACTGGAGCGCGATAT Acid345_1495 1818665 - 1818931 + | hypothetical protein TERM 1404 1819051 - 1819077 + F 100 -16.7 -3.20382 | TCAGATTTTCACCAG TGCGTGCACGT GATCA ACGTGCACGCA TTCGTGCGTCTGGAC Acid345_1496 1819383 - 1821278 + | multicopper oxidase, type 2 TERM 1405 1821287 - 1821341 + T 82 -11.5 -3.86252 | gap 1, opp_overlap 1821303, overlap 1821303 GCAATAGCCGAAAGA CGTGACCACGTAAAAAGGCCAGCATC TTAC GATGCTGGCCTTGGTTCGTGCT-GCG TTGTGTTTAGTGAGC TERM 1406 1821303 - 1821326 + T 100 -16.8 -3.41693 | opp_overlap 1821303, overlap 1821287 GTGACCACGTAAAAA GGCCAGCATC TTAC GATGCTGGCC TTGGTTCGTGCTGCG TERM 1407 1821326 - 1821303 - T 100 -16.8 -4.68593 | opp_overlap 1821303 1821287 GTGACCACGTAAAAA GGCCAGCATC TTAC GATGCTGGCC TTGGTTCGTGCTGCG Acid345_1497 1823696 - 1821348 - | hypothetical protein TERM 1408 1824821 - 1824800 - g 71 -8 -4.08557 | gap 1, opp_overlap 1824799 GGTGGTAAAGAACAA GGCT-GCGC TTCGT GCGCTAGCC AGTTCGTAATCGACA Acid345_1498 1824111 - 1824830 + | Crp/FNR family transcriptional regulator TERM 1409 1824848 - 1824878 + F 100 -11.9 -5.04868 | gap 1 GACATTTTTCCGATT TGGCGCCGCGGATC TTTG GATC-GCTGCGCCA TTTTGTTTGATTTGC Acid345_1499 1824995 - 1825492 + | cyclic nucleotide-binding protein TERM 1410 1825508 - 1825533 + T 100 -12.6 -4.55128 | overlap 1825509 CGAGAGCTTATGTCA TGGCAGTCGG TCGTGC CCGACTGCCG TTTTCCTTTGAGCAT TERM 1411 1825509 - 1825532 + T 88 -13.9 -3.32354 | overlap 1825508 GAGAGCTTATGTCAT GGCAGTCGG TCGTGC CCGACTGCC GTTTTCCTTTGAGCA Acid345_1500 1826894 - 1825548 - | major facilitator transporter TERM 1412 1826948 - 1826962 + H 100 -10 -5.00616 | AAAATATTTTGTTTC TTCCCG CAC CGGGAA TTTTTTGCCGACGGA TERM 1413 1827272 - 1827288 + H 74 -7.9 -4.07568 | TTTTTCCTGCGACCT CTACCGG CAG CCGGAAG TTTTCAAGACAACAA TERM 1414 1830711 - 1830741 + G 75 -11.9 -3.23393 | opp_overlap 1830695 1830709 1830714, overlap 1830709 1830714 ACTCGCTTGAACAGC GAACGCCAGGTCC AGTTC GGACTTCGCGTTC TCTTCTAACCTGAAA Acid345_1501 1827378 - 1830749 + | TonB-dependent receptor TERM 1415 1830794 - 1830762 - f 71 -10.5 -3.29211 | opp_overlap 1830764 1830765, overlap 1830757 1830765 TAACCTGAAATGCAA CTACGGAGAGCAGGC ACA ACCTGCTCTCCGCTT TTCTTCTAGTCAGGA TERM 1416 1830764 - 1830792 + F 100 -14.6 -4.81212 | opp_overlap 1830762 1830757 1830765, overlap 1830765 ACCTGAAATGCAACT ACGGAGAGCAGG CACAA CCTGCTCTCCGC TTTTCTTCTAGTCAG TERM 1417 1830791 - 1830765 - f 100 -18.8 -2.81888 | opp_overlap 1830765 1830764, overlap 1830762 1830757 CCTGAAATGCAACTA CGGAGAGCAGGC ACA ACCTGCTCTCCG CTTTTCTTCTAGTCA TERM 1418 1830765 - 1830791 + F 100 -18.1 -3.48004 | opp_overlap 1830762 1830757 1830765, overlap 1830764 CCTGAAATGCAACTA CGGAGAGCAGG CACAA CCTGCTCTCCG CTTTTCTTCTAGTCA TERM 1419 1831205 - 1831186 - g 74 -11.4 -3.61764 | opp_overlap 1831185 1831180 1831186, overlap 1831178 TCACCAAGTCGGAAA GCAGCGCC GACG GGCGCTAC GTCTTCGTTTATCTC TERM 1420 1832535 - 1832525 - g 71 -6.8 -4.11216 | overlap 1832505 1832526 CGCGCATTTGCAAAA GCTG CTT CAGC TTCGCAAGCAGCACA TERM 1421 1832604 - 1832575 - g 71 -7.1 -4.16284 | opp_overlap 1832573 AGAGCGGCGAACAAA CGGACCTCTTCTC GTCC GAGAAAGGGTTCG CCTATTACCGCGTCA Acid345_1502 1830984 - 1832816 + | alpha amylase TERM 1422 1833929 - 1833943 + G 79 -7.1 -4.59773 | CGACTTCCACGCCTA TCCGG ACACG CCGGA TTTTTCCGGCTACAC Acid345_1503 1832952 - 1835237 + | hypothetical protein TERM 1423 1835436 - 1835402 - f 75 -5.8 -4.6645 | gap 1, opp_overlap 1835407, overlap 1835405 1835407 TATAGATAGAGAAAA CAACAGGGGGACAGA GCACAA TCTGTCCCCCT-TAA CTTTTGGGCGCGAGC TERM 1424 1835434 - 1835405 - f 95 -12.2 -4.42325 | opp_overlap 1835407, overlap 1835402 1835407 AGATAGAGAAAACAA CAGGGGGACAGA GCACAA TCTGTCCCCCTT AACTTTTGGGCGCGA TERM 1425 1835432 - 1835407 - f 100 -14.8 -3.79765 | opp_overlap 1835407, overlap 1835405 1835402 ATAGAGAAAACAACA GGGGGACAGA GCACAA TCTGTCCCCC TTAACTTTTGGGCGC TERM 1426 1835407 - 1835432 + F 95 -14.8 -3.36823 | opp_overlap 1835405 1835402 1835407 ATAGAGAAAACAACA GGGGGACAGA GCACAA TCTGTCCCCC TTAACTTTTGGGCGC TERM 1427 1836162 - 1836143 - g 90 -11.4 -4.25458 | AAGGTGACGAAGAAA GCCGCACC CGCC GGTACGGC GCTGCGCGTGAAAGT Acid345_1504 1835543 - 1837003 + | peptidase M20C, Xaa-His dipeptidase TERM 1428 1837033 - 1837074 + G 100 -9.4 -5.04987 | gap 1, opp_overlap 1837017, overlap 1837033 1837035 CTTCGTAGACATTCT G-ACGCAGACGTTTCGCGC TCTTT GGGCGCATCGTCTGCGTAC TTTTTTGACGATGTT TERM 1429 1837035 - 1837071 + G 76 -12.2 -3.38056 | opp_overlap 1837017, overlap 1837033 1837033 TCGTAGACATTCTGA CGCAGACGTTTCGCGC TCTTT GGGCGCATCGTCTGCG TACTTTTTTGACGAT TERM 1430 1837309 - 1837292 - g 72 -9.8 -3.67597 | opp_overlap 1837304 CTCGGCATCCAAGAA GCGCCG TATGTG CGGCGC GCGACACCGTGTATT Acid345_1505 1837010 - 1838254 + | ABC efflux pump, inner membrane subunit Acid345_1506 1838257 - 1839495 + | ABC efflux pump, inner membrane subunit TERM 1431 1839583 - 1839617 + F 93 -13.6 -3.91032 | opp_overlap 1839572 1839586, overlap 1839589 AACACTCGGGTTGAA CGAGGACGGTGTCGCG AAA TGCGGCACCGTTTTTG TTTGTGCGATCATTC TERM 1432 1839589 - 1839611 + F 100 -13.4 -5.38054 | opp_overlap 1839586, overlap 1839583 CGGGTTGAACGAGGA CGGTGTCGCG AAA TGCGGCACCG TTTTTGTTTGTGCGA Acid345_1507 1839601 - 1840431 + | hypothetical protein Acid345_1508 1841258 - 1840539 - | hypothetical protein TERM 1433 1840964 - 1840982 + gT 77 -7.3 -4.24745 | CGATTTGGAAGTCCT GAGCGCC AGGGA GGCGCGC TTTGTCTTCCTCGTG Acid345_1509 1841496 - 1841230 - | hypothetical protein Acid345_1510 1842335 - 1841499 - | hypothetical protein Acid345_1511 1842514 - 1843167 + | putative cyclase TERM 1434 1843187 - 1843210 + T 76 -11.8 -3.06183 | overlap 1843190 AAGTTGCTCGACTGC GAATGCGCAT TGGG GTGCGCATTC TTCGCTCGCCATCAA Acid345_1512 1844420 - 1843323 - | FAD dependent oxidoreductase Acid345_1513 1845076 - 1844411 - | hypothetical protein Acid345_1514 1847032 - 1845257 - | ABC transporter, ATPase subunit TERM 1435 1847319 - 1847333 + r 72 -11.4 -3.06183 | AGGTCCTTCGACTTC GCGACC CTC GGTCGC TTCGCTCAGGATGAC Acid345_1515 1849760 - 1847382 - | YjgP/YjgQ family protein TERM 1436 1849847 - 1849831 - H 83 -7.3 -4.62984 | overlap 1849826 GCACGAGAGAGAAAA CCTTTCA CCA CGAAAGG CACAAAGGGGCACGA Acid345_1516 1850053 - 1852332 + | glycoside hydrolase family protein TERM 1437 1852357 - 1852386 + F 100 -10.7 -5.08601 | gap 1, opp_overlap 1852356 1852357 CTTCCCGCAATAAAT CGCCGCGC-GCC GAATCAA GGTAGCGCGGCG TTTTTCTTCCGGTAC Acid345_1517 1852413 - 1853204 + | hypothetical protein Acid345_1518 1853242 - 1853928 + | hypothetical protein Acid345_1519 1854020 - 1854625 + | hypothetical protein TERM 1438 1854641 - 1854677 + F 100 -11.6 -5.11836 | gap 1, overlap 1854661 AAGTCAGAGTTGCAC GGGTTTCAGCGGCCTGC CGCG GCAGGG-GCTGGAGCCC TTTTCTTTTCGCTGT Acid345_1520 1855130 - 1856596 + | peptidase M20 TERM 1439 1857132 - 1857146 + G 74 -12.8 -2.9348 | opp_overlap 1857127 1857125 1857124, overlap 1857123 AGAACAATGAGCATT CCGGCG GAG CGCCGG TGTGTCCGATTTACG Acid345_1521 1856768 - 1857997 + | phosphoesterase TERM 1440 1858023 - 1858046 + T 100 -13.8 -4.33258 | opp_overlap 1858019 1858010 TATTCGAGACAGCTT GCCCCGTGGA GAAA TCCTCGGGGC TTTCTGTTTCGCAGT Acid345_1522 1859167 - 1858061 - | Zn-dependent dipeptidase TERM 1441 1858759 - 1858747 - G 75 -5.5 -4.61231 | overlap 1858748 TGAGATCGCGAAAAA CCTCG ATG CGAGA AACATCTTCTTCGAA TERM 1442 1859213 - 1859196 - R 100 -12.7 -4.78237 | overlap 1859183 GACGGCAGAAGAAAA CCCAGCC GCAG GGCTGGG TTAGAAACCGAATGA Acid345_1523 1859444 - 1859244 - | cold-shock DNA-binding protein family protein TERM 1443 1859474 - 1859496 + H 72 -11.9 -2.79183 | GAGTTCCTCCGTGCG CGACGCGGC AGGGA GCCGCGACG TGTGCTGCCCATCCC TERM 1444 1859729 - 1859711 - H 76 -10.3 -3.61654 | opp_overlap 1859714, overlap 1859714 GATAGGTATGGGAAA GAAGGCG GGGCG CGCCTTC TGGCGACATCACTCC Acid345_1524 1859883 - 1862183 + | CheA signal transduction histidine kinases Acid345_1525 1862176 - 1862634 + | CheW protein Acid345_1526 1862683 - 1865259 + | methyl-accepting chemotaxis sensory transducer Acid345_1527 1865259 - 1865633 + | response regulator receiver protein, CheY Acid345_1528 1865630 - 1866697 + | response regulator receiver modulated CheB methylesterase Acid345_1529 1866701 - 1867522 + | MCP methyltransferase, CheR-type Acid345_1530 1867501 - 1868019 + | hypothetical protein Acid345_1531 1869466 - 1868021 - | aldehyde dehydrogenase TERM 1445 1869415 - 1869372 - G 100 -26.3 -4.07687 | gap 1 ACTTTGTGGTCAAAA GGCGAGTGGATCT-CGACGG GACTA CCGTCGGAGATCCACTCGCC GTTGAGCAGGAACGG Acid345_1532 1870784 - 1869474 - | aminotransferase TERM 1446 1870693 - 1870705 + g 75 -10.5 -3.64703 | opp_overlap 1870691 ATGTCCTTAATGATC GCGCC GCT GGCGC TTTCAATAACGACAG Acid345_1533 1872260 - 1870788 - | methylmalonate-semialdehyde dehydrogenase [acylating] TERM 1447 1871181 - 1871201 + g 82 -10.3 -4.15508 | opp_overlap 1871152 ATTCGCAACCCTGTA GCCGCGGCC ATC GGTCACGGC TTTTGCACCTTGCTT TERM 1448 1872070 - 1872101 + g 79 -12.8 -3.41234 | opp_overlap 1872041 GGCGTCTCGCGCCAC GCGGGCCACGCGGC AGCG GCCGCGCGCACCGC TTCATTCACTTCGTC Acid345_1534 1873660 - 1872299 - | 4-aminobutyrate aminotransferase Acid345_1535 1875141 - 1873660 - | aldehyde dehydrogenase (acceptor) TERM 1449 1874075 - 1874085 + g 71 -6.8 -4.20768 | CGATTGCCGCCGGAT GCGA CCT TCGC TTCTTTCTTGCCGAT TERM 1450 1874915 - 1874930 + g 70 -11.8 -2.78712 | opp_overlap 1874907 1874898, overlap 1874912 CGGAAGAGGACGCGT CCGCGC TCCT GCGCGG TGGTTGCGTTCCAGG Acid345_1536 1876590 - 1875160 - | amino acid transporter Acid345_1537 1878045 - 1876675 - | glutamate-1-semialdehyde 2,1-aminomutase TERM 1451 1878127 - 1878092 - R 100 -19.1 -3.04263 | gap 1 AGTGCATCCGCAAGA CTGCCGCCGTGG-CGC GGAGA GCAACCACGGCGGCAG AGCTACGGGCTAAAA Acid345_1538 1881835 - 1878137 - | TonB-dependent receptor TERM 1452 1879111 - 1879127 + g 75 -10.1 -3.64703 | ACTGCGCGCACGTCC CGTCACC CAT GGTGGCG TTTAGGTCGAGACAC TERM 1453 1881948 - 1881928 - H 72 -4 -4.78077 | opp_overlap 1881928 TGCAACGAAAACAAA CCTTGC TATAATCGC GCAAGG TTATTGAATCCCTCT Acid345_1539 1881980 - 1882858 + | MerR family transcriptional regulator Acid345_1540 1882877 - 1883938 + | ABC spermidine/putrescine transporter, periplasmic ligand binding protein Acid345_1541 1883947 - 1885011 + | spermidine/putrescine ABC transporter ATPase subunit Acid345_1542 1885011 - 1885856 + | ABC spermidine/putrescine transporter, inner membrane subunit Acid345_1543 1885856 - 1886683 + | ABC spermidine/putrescine transporter, inner membrane subunit Acid345_1544 1886680 - 1888194 + | amine oxidase TERM 1454 1888234 - 1888214 - T 100 -14 -4.8622 | opp_overlap 1888208 1888214 CTCCGCAATTAAAAA GGCCGTCC TCGTC GGACGGCC TTCATCTTTACATCT TERM 1455 1888214 - 1888234 + T 95 -14 -3.47431 | opp_overlap 1888214, overlap 1888208 CTCCGCAATTAAAAA GGCCGTCC TCGTC GGACGGCC TTCATCTTTACATCT Acid345_1545 1891569 - 1888252 - | TonB-dependent receptor TERM 1456 1890798 - 1890787 - G 83 -5.8 -4.93877 | opp_overlap 1890795 GCGCAGGAAATAAAA CACG CTGC CGTG GAACGCGTTGGTACC Acid345_1546 1892514 - 1891618 - | hypothetical protein Acid345_1547 1892614 - 1893891 + | DNA-directed DNA polymerase Acid345_1548 1894307 - 1893894 - | molybdenum-pterin binding protein TERM 1457 1895078 - 1895055 - g 75 -10.2 -3.68435 | overlap 1895053 CGGCGGAAAACAACA TGCAGCCCGG CGGC CCGAGCGGCA ACGTGATCGGTGTGG Acid345_1549 1894436 - 1897633 + | TonB-dependent receptor Acid345_1550 1897760 - 1898773 + | hypothetical protein TERM 1458 1898974 - 1898961 - g 71 -8.1 -4.07568 | CGCGGCCCTGGAAAA GCTCG GCCA CGAGC CGTCGTACCACATTC TERM 1459 1899590 - 1899577 - g 77 -8.1 -4.35361 | TACAAGAAAACCAAA TCGGC AGTC GCCGA GGACCTCGACGAAGA Acid345_1551 1898812 - 1899846 + | D-alanine--D-alanine ligase TERM 1460 1899859 - 1899849 - T 77 -4.6 -4.86731 | overlap 1899850 CTCCGGCAAATAAAA GCAG CTG CCGC CGATATCCCGCTCTG TERM 1461 1900035 - 1900077 + T 83 -9.8 -4.09739 | CGATATCCCACTCTG TATCAGGCCAGCGCTTCAGC GCT GCCGAACTGCCGCCCTGATA TTTTCGGGGGCTTAA Acid345_1552 1900820 - 1900203 - | hypothetical protein TERM 1462 1900993 - 1901036 + G 80 -9.6 -4.11484 | gap 1 CAACATCCCGCTCTG TATCAG-GGCAGCGCTTCAGC GCT GCCGAACTGCCGCCCCTGATA TTTTCGGGGCTTCAG Acid345_1553 1900835 - 1901080 + | hypothetical protein TERM 1463 1901161 - 1901141 - f 80 -8.9 -4.10657 | opp_overlap 1901150 CTATATCGCCGAAAA GCCGCTCTG TAT CAGGGCAGC GCTTCAGCGCTGCCG TERM 1464 1901150 - 1901193 + F 83 -9.6 -4.11484 | gap 1, opp_overlap 1901141 CGAAAAGCCGCTCTG TATCAG-GGCAGCGCTTCAGC GCT GCCGAACTGCCGCCCCTGATA TTTTCGGGGCTTCAG TERM 1465 1901557 - 1901600 + F 83 -9.6 -4.12942 | gap 1, overlap 1901591 1901593 CAACATCCCGCTCTG TATCAG-GGCAGCGCTTCAGC GCT GCCGAACTGCCGCCCCTGATA TTTTCGGGGCTTTAG TERM 1466 1902544 - 1902532 - g 70 -2.7 -4.78848 | TGCGCAAACACAAAA TTCCT CCC AAGAA ACCCGTCGCATCCAT Acid345_1554 1902024 - 1902806 + | hypothetical protein Acid345_1555 1902942 - 1903409 + | peptidase M52, hydrogen uptake protein Acid345_1556 1903431 - 1903793 + | hydrogenase expression/formation protein HypA Acid345_1557 1904561 - 1903812 - | pyruvate dehydrogenase complex E1 component, alpha subunit TERM 1467 1904615 - 1904599 - R 83 -10.8 -3.95022 | opp_overlap 1904599 CTGAGCAATAGGAAA GCCCGC ACGCG GCGGGC TTTGGGTAAGAGCGA TERM 1468 1904599 - 1904615 + r 76 -10.8 -3.64703 | opp_overlap 1904599 CTGAGCAATAGGAAA GCCCGC ACGCG GCGGGC TTTGGGTAAGAGCGA Acid345_1558 1907033 - 1904637 - | Lon-A peptidase TERM 1469 1907244 - 1907260 + r 84 -13.7 -3.06183 | opp_overlap 1907210 GGATCCTTCGACTTC GCAGCGC TTG GCGCTGC TTCGCTCAGGATGAC TERM 1470 1907312 - 1907285 - R 100 -14.2 -5.74122 | opp_overlap 1907290, overlap 1907286 GATGACAGAAAAAAA CCAAACCCCAGC TTTC GCTGGGGTTTGT GGTGGAACGTTGAGA TERM 1471 1907311 - 1907286 - R 100 -17.7 -4.02846 | opp_overlap 1907290, overlap 1907285 ATGACAGAAAAAAAC CAAACCCCAGC TTTC GCTGGGGTTTG TGGTGGAACGTTGAG TERM 1472 1907290 - 1907307 + r 93 -12.7 -3.96327 | opp_overlap 1907286 1907285 CAGAAAAAAACCAAA CCCCAGC TTTC GCTGGGG TTTGTGGTGGAACGT clpX 1908603 - 1907332 - | ATP-dependent protease ATP-binding subunit TERM 1473 1908843 - 1908877 + r 74 -11.4 -3.21747 | opp_overlap 1908837 GTTTGTAAATGATGT CGTCCACCAAGCCGTA CTC TTTGGCTTGCTGGGCG TTCATGATGAAGTCG Acid345_1560 1909404 - 1908820 - | ATP-dependent Clp protease proteolytic subunit ClpP TERM 1474 1909508 - 1909485 - R 83 -10.3 -3.97947 | gap 1 GCGATTCAGGAGAAA GCCG-TCCGC CCTAT GCGGAGCGGC TGTACAGTAAGTCGA Acid345_1561 1910808 - 1909495 - | trigger factor TERM 1475 1909655 - 1909685 + g 72 -9.7 -3.6422 | overlap 1909654 CGGTCCAATTCCTCG TCGCTGACTTCGA TTTTC TCGGCGTCGGCGA TCTTTTCCAGGAGTA Acid345_1562 1911408 - 1910902 - | dual specificity protein phosphatase Acid345_1563 1911453 - 1911767 + | hypothetical protein Acid345_1564 1911767 - 1912453 + | uracil-DNA glycosylase superfamily protein Acid345_1565 1913418 - 1912450 - | polysaccharide deacetylase Acid345_1566 1915729 - 1913513 - | TPR repeat-containing protein Acid345_1567 1916842 - 1915802 - | hypothetical protein TERM 1476 1916973 - 1916953 - H 91 -9.7 -4.58663 | opp_overlap 1916945 AGGACGGCCCAAAAA GGTGCACCT CTA AGGTGAACC GACGTGGGATTCCTG Acid345_1568 1917069 - 1918346 + | peptidase M16-like Acid345_1569 1918746 - 1919234 + | pilin, type IV, putative TERM 1477 1919256 - 1919276 + F 100 -16.9 -5.56673 | opp_overlap 1919256 GGGTTTCATCGAAGA GGAGCCGCA AAC TGCGGCTCC TTTTTTCTTCTCGAT TERM 1478 1919276 - 1919256 - f 100 -16.9 -3.08679 | opp_overlap 1919256 GGGTTTCATCGAAGA GGAGCCGCA AAC TGCGGCTCC TTTTTTCTTCTCGAT Acid345_1570 1919454 - 1919942 + | pilin, type IV, putative TERM 1479 1919960 - 1919990 + F 100 -18.4 -4.37092 | opp_overlap 1919965 AGAAAGGGTTTCATC GAAAAGGAGCCGCA AAC TGCGGCTCCTTTCC TTTTCTGCGCGAGGT TERM 1480 1919985 - 1919965 - f 100 -16.9 -4.18018 | opp_overlap 1919960 GGGTTTCATCGAAAA GGAGCCGCA AAC TGCGGCTCC TTTCCTTTTCTGCGC TERM 1481 1920214 - 1920232 + G 79 -7.4 -4.63218 | opp_overlap 1920221, overlap 1920206 1920216 TCAGCCTTTCGGTTC CAGAACAC GAA GTGTTCGG TTTTCTTGGCCCAAA Acid345_1571 1920114 - 1921043 + | ABC transporter, ATPase subunit Acid345_1572 1921040 - 1921816 + | hypothetical protein Acid345_1573 1921816 - 1922826 + | hypothetical protein TERM 1482 1923178 - 1923155 - g 77 -2.4 -5.0538 | gap 1, overlap 1923156 1923157 GCGCAGGTCAAAAAA TTG-GACGATC TGC GATCGCCGCTA CGCTACTTACTCGGA Acid345_1574 1922840 - 1923499 + | outer membrane lipoprotein carrier protein LolA Acid345_1575 1923577 - 1924788 + | type II secretion system protein Acid345_1576 1924798 - 1926438 + | type II secretion system protein E Acid345_1577 1926441 - 1928081 + | hypothetical protein Acid345_1578 1928078 - 1928614 + | hypothetical protein Acid345_1579 1928616 - 1929173 + | hypothetical protein Acid345_1580 1929175 - 1930119 + | hypothetical protein TERM 1483 1930163 - 1930146 - T 100 -12.7 -5.16841 | opp_overlap 1930146 TGAGAGTAAGAAAAA CCCCGTC CGCA GACGGGG TTCTCATTTGAAACT TERM 1484 1930146 - 1930163 + T 85 -12.7 -3.60419 | opp_overlap 1930146 TGAGAGTAAGAAAAA CCCCGTC CGCA GACGGGG TTCTCATTTGAAACT Acid345_1581 1930748 - 1930188 - | HesB/YadR/YfhF TERM 1485 1930618 - 1930601 - G 75 -9.8 -3.86202 | CTTGATTATACCAAA CCGGGC CAAATC GCCCGG AAATCCGCAGAAACT Acid345_1582 1930898 - 1931176 + | hypothetical protein TERM 1486 1931250 - 1931234 - T 73 -10.9 -3.34344 | TGATTGCGCAAGCAA CTCTCAC CTG GTGAGAG CGTGCGGATGCTCGG Acid345_1583 1932992 - 1931415 - | hypothetical protein TERM 1487 1933009 - 1933026 + r 74 -9.9 -3.68435 | opp_overlap 1933008, overlap 1933007 CACAAGACAGGCAAG CTTTGGC GAAT GCCAAAG TGTTATTTTGGCCGC Acid345_1584 1933402 - 1933112 - | hypothetical protein TERM 1488 1933172 - 1933207 + g 77 -10.4 -3.85389 | GAAGGTGTTCTCGTA GTTCTGCACGTTCTGC TGAA GCAGGGTGAGCAGAGC TTTGGCTTGTTGGGG Acid345_1585 1934138 - 1933512 - | hypothetical protein TERM 1489 1933952 - 1933992 + g 71 -7.6 -4.08767 | gap 1, opp_overlap 1933951 1933952 1933991 ACTGCAACCGGAAAG GTTTGGCATCGACGGCCCA GCCG TGGGCCG-CGATATAAAGC TTTTGGAAAGCTCCG Acid345_1586 1934190 - 1934702 + | hypothetical protein Acid345_1587 1935310 - 1934699 - | GCN5-related N-acetyltransferase Acid345_1588 1936839 - 1935463 - | two component, sigma54 specific, Fis family transcriptional regulator TERM 1490 1936180 - 1936191 + g 75 -3.6 -4.72272 | overlap 1936167 CCGAGTGTTCGCACC GGTG AACG CGCC TTTTTCGTGCCCGAA TERM 1491 1936879 - 1936851 - R 100 -12.4 -4.84529 | opp_overlap 1936851 CCATAAAGTCAAAAA CCCTCGAACGAC GTCAG GTCGCGCGAGGG TCTGTTCAAGTTCAG Acid345_1589 1937501 - 1936902 - | hypothetical protein Acid345_1590 1938978 - 1937635 - | PAS/PAC sensor signal transduction histidine kinase TERM 1492 1937663 - 1937673 + g 73 -3.2 -4.82901 | GCGGTGGCGGGCTTT TCTG CTG CAGG TTTTTGTAAAGGCAG Acid345_1591 1939964 - 1938975 - | type 4 prepilin peptidase 1. Aspartic peptidase. MEROPS family A24A TERM 1493 1939102 - 1939131 + g 83 -7.7 -4.62783 | gap 1, opp_overlap 1939089 AACGCTGCCTTGCGA GCGCGG-CTAGCGC CTT GCGCCGGTCCGAGC TTTTTCACGTACCTG TERM 1494 1939461 - 1939442 - G 77 -7.8 -4.29432 | CAAATTCCAGGAAAA GCATGACC ACCA GGTCCTGC ATGGGTACCAAAACG TERM 1495 1940009 - 1939990 - H 71 -5.7 -4.3739 | TAGGGGTTTACAAAA GTGCCTC GATTAT AAGGCAC CGTAAGGCCTTCGCC Acid345_1592 1940048 - 1940569 + | hypothetical protein TERM 1496 1940574 - 1940592 + T 80 -11.7 -3.34962 | opp_overlap 1940574 CGAAGCAATAAGAAA GGCTGGC GCGAA GCCAGCC TTATGAGATCTGAAG TERM 1497 1940592 - 1940574 - T 95 -11.7 -4.51994 | opp_overlap 1940574 CGAAGCAATAAGAAA GGCTGGC GCGAA GCCAGCC TTATGAGATCTGAAG Acid345_1593 1941060 - 1940614 - | hypothetical protein TERM 1498 1940850 - 1940861 + g 72 -4.4 -4.58303 | GCAGCGCACCCGCTG TCGA GCCC TCGA TTTTCTCGTCTTTGC TERM 1499 1941152 - 1941117 - R 100 -15.4 -4.08394 | opp_overlap 1941151, overlap 1941121 AGAGCTGCTGTAAAA GCAACAGCCCAGCCTC TTGC GAAGCTGGGCCGCAGC GCTCAACTTGCGCCT TERM 1500 1941148 - 1941121 - R 100 -15.6 -3.66908 | overlap 1941117 CTGCTGTAAAAGCAA CAGCCCAGCCTC TTGC GAAGCTGGGCCG CAGCGCTCAACTTGC Acid345_1594 1941697 - 1941167 - | hypothetical protein Acid345_1595 1941709 - 1942032 + | hypothetical protein Acid345_1596 1942644 - 1942033 - | small GTP-binding protein Acid345_1597 1943973 - 1942660 - | peptidase M20D, amidohydrolase TERM 1501 1943110 - 1943143 + g 75 -3.9 -4.72272 | gap 1 GAATGCTCGCACGGT CAGCAGCATTTCC-AC TTT GTCGGGGATGATGTTG TTTTTGGTGCCACCG TERM 1502 1943799 - 1943767 - G 77 -11.9 -3.59979 | opp_overlap 1943772 1943782 1943784 TTCCGTGACTTCAAA GCCAAGCTTGCGGAG TCC CGCAGCCAGCTTGGC TGCCGTATTTTCCTC TERM 1503 1943782 - 1943806 + g 81 -8.5 -4.30576 | opp_overlap 1943767, overlap 1943772 1943784 GCCAAGCTTGCGGAG TCCCGCAGCCA GCT TGGCTGCCGTA TTTTCCTCGTGAAGA TERM 1504 1943784 - 1943804 + g 78 -11.1 -3.7574 | opp_overlap 1943767, overlap 1943772 1943782 CAAGCTTGCGGAGTC CCGCAGCCA GCT TGGCTGCCG TATTTTCCTCGTGAA Acid345_1598 1944577 - 1944008 - | hypothetical protein TERM 1505 1944085 - 1944115 + g 70 -2.4 -4.82901 | overlap 1944086 CCGCAATGTGATTGT CCGGTTGCGTCG AATCCAC CGGCGCAGACGC TTTTTGTAACCGGGC Acid345_1599 1944735 - 1945229 + | response regulator receiver protein Acid345_1600 1945222 - 1945614 + | response regulator receiver protein Acid345_1601 1946108 - 1945611 - | carbonic anhydrase TERM 1506 1946186 - 1946167 - R 100 -15 -3.96148 | TGTCTGCATGACAAA GCGGCAGC CGTA GCTGCCGC CTTGAGGGAACTGCT Acid345_1602 1946769 - 1946206 - | pilin, type IV, putative TERM 1507 1946870 - 1946855 - R 78 -6.8 -4.62069 | overlap 1946856 TGTTTACGTTAAAAA CCTGCG CAGC CGCAGA ATGCTAATACAAACG Acid345_1603 1947594 - 1947010 - | hypothetical protein TERM 1508 1948129 - 1948100 - g 79 -12.9 -3.28712 | opp_overlap 1948103 1948104, overlap 1948103 GCCCGCGCTTCAGAA GAACCGCCAAGCG GATA CACCTGGCGATTC CTCGGTGACGACCTG Acid345_1604 1947681 - 1948742 + | hypothetical protein Acid345_1605 1949530 - 1948745 - | ABC transporter, ATPase subunit Acid345_1606 1950285 - 1949590 - | short-chain dehydrogenase/reductase SDR Acid345_1607 1951157 - 1950282 - | Beta-lactamase Acid345_1608 1951302 - 1951670 + | hypothetical protein TERM 1509 1951695 - 1951717 + T 100 -14.9 -5.27399 | opp_overlap 1951695 AGCAGGCAAGCAAAA GGCAGGAGC CGAAA GCTCCTGCC TTTTTTAATCTCTTC TERM 1510 1951717 - 1951695 - T 100 -15.6 -4.43879 | opp_overlap 1951695 AGCAGGCAAGCAAAA GGCAGGAGCC GAA AGCTCCTGCC TTTTTTAATCTCTTC Acid345_1609 1952264 - 1951737 - | hypothetical protein TERM 1511 1952275 - 1952249 - G 80 -14.5 -2.80474 | opp_overlap 1952253, overlap 1952253 TATAACAGCCCAAAC GAAAGGAGGCC GTCAT GGCCTCCTTCC TCGTCGAATTCCGTG TERM 1512 1952271 - 1952253 - G 86 -11.7 -4.07647 | opp_overlap 1952253, overlap 1952249 ACAGCCCAAACGAAA GGAGGCC GTCAT GGCCTCC TTCCTCGTCGAATTC TERM 1513 1952253 - 1952271 + g 75 -12.4 -3.22223 | opp_overlap 1952253 1952249 ACAGCCCAAACGAAA GGAGGCCG TCA TGGCCTCC TTCCTCGTCGAATTC Acid345_1610 1952672 - 1952295 - | hypothetical protein Acid345_1611 1953760 - 1952972 - | short-chain dehydrogenase/reductase SDR TERM 1514 1954145 - 1954173 + r 100 -14 -4.76423 | gap 1, opp_overlap 1954149, overlap 1954149 TTTTCGCTCGAATAA C-AAAGGCGGCGA TCAC TCGCCGCCTTTCG TTTTGTCTCTTTGTG TERM 1515 1954168 - 1954149 - R 100 -15 -4.44667 | opp_overlap 1954145 1954149 CGCTCGAATAACAAA GGCGGCGA TCAC TCGCCGCC TTTCGTTTTGTCTCT TERM 1516 1954149 - 1954168 + r 100 -15 -4.31065 | opp_overlap 1954149, overlap 1954145 CGCTCGAATAACAAA GGCGGCGA TCAC TCGCCGCC TTTCGTTTTGTCTCT Acid345_1612 1955270 - 1954275 - | tagatose 1,6-diphosphate aldolase TERM 1517 1955157 - 1955169 + g 72 -4.7 -4.56597 | overlap 1955158 GCGATCGGTCGCGTT CGCGC CCA GCGCC TTTTTCAGCGAACCG TERM 1518 1956116 - 1956074 - g 72 -6.4 -4.37658 | gap 3 AATTCGTGGAGAAAA CCG-GACTCGATG-CGCTGGC CATC GCCATCGGCACC-AGTCACGG CGCCTACAAATTCAA Acid345_1613 1955548 - 1956582 + | fructose-1,6-bisphosphate aldolase TERM 1519 1956621 - 1956600 - f 85 -13 -3.53012 | opp_overlap 1956600 TCGTTTCTGCCGAAA GGCCGGAC CAACGC GTCCGGCC TTTTCTCTTCGACGC TERM 1520 1956600 - 1956621 + F 100 -13 -4.66537 | opp_overlap 1956600 TCGTTTCTGCCGAAA GGCCGGAC CAACGC GTCCGGCC TTTTCTCTTCGACGC Acid345_1614 1956673 - 1957344 + | hypothetical protein TERM 1521 1957386 - 1957359 - T 100 -7.6 -5.4756 | opp_overlap 1957360 1957361 1957363, overlap 1957361 AAGCTGAACAAAAAA GAGAGGCCGGAC GCGA ATCCGGCCTCGT TTACTCTTTGCGGCA TERM 1522 1957360 - 1957385 + T 83 -10.4 -4.00532 | opp_overlap 1957359 1957361, overlap 1957361 1957363 AGCTGAACAAAAAAG AGAGGCCGGA CGCGAA TCCGGCCTCG TTTACTCTTTGCGGC TERM 1523 1957361 - 1957384 + T 81 -13.9 -2.99837 | opp_overlap 1957359 1957361, overlap 1957360 1957363 GCTGAACAAAAAAGA GAGGCCGGA CGCGAA TCCGGCCTC GTTTACTCTTTGCGG TERM 1524 1957384 - 1957361 - T 100 -14.6 -4.36592 | opp_overlap 1957361 1957360 1957363, overlap 1957359 GCTGAACAAAAAAGA GAGGCCGGAC GCGA ATCCGGCCTC GTTTACTCTTTGCGG Acid345_1615 1959431 - 1957404 - | hypothetical protein TERM 1525 1959805 - 1959792 - R 75 -3.7 -4.88918 | overlap 1959793 1959794 GCACTCGAAAGAAAA CGGGC TTCA GCCCC TGCGCAAGCCGAGCG TERM 1526 1960128 - 1960112 - R 74 -2.2 -5.00616 | opp_overlap 1960087 1960086, overlap 1960126 CGGCGGCGGAAAAAA CGCC GCGAAAATA GGCG ATTTAACCGCTAGTC Acid345_1616 1960918 - 1960181 - | ribonuclease PH Acid345_1617 1961782 - 1960937 - | phosphoesterase TERM 1527 1961814 - 1961827 + r 78 -6.7 -4.5442 | opp_overlap 1961813 AAGTTCCAAGGCAAG GATGC CGGT GCATC TTTTCTGCTTCAACA TERM 1528 1961849 - 1961869 + r 83 -12.6 -3.19936 | opp_overlap 1961849 GCTTCAACAGAAAAA GGGTGCCA GCGAG TGGCACCC TTGGGTTAAGTGATT TERM 1529 1961869 - 1961849 - R 100 -12.6 -5.0916 | opp_overlap 1961849 GCTTCAACAGAAAAA GGGTGCCA GCGAG TGGCACCC TTGGGTTAAGTGATT Acid345_1618 1963076 - 1961892 - | ABC efflux pump, inner membrane subunit Acid345_1619 1964226 - 1963078 - | ABC efflux pump, inner membrane subunit TERM 1530 1964244 - 1964270 + r 74 -8 -3.95073 | CACTTCTCCTACGCG GGCCTTCTCG GCTTCAA CGAGAACGCC TTTATCCATGTGAAG Acid345_1620 1964951 - 1964226 - | ABC transporter, ATPase subunit Acid345_1621 1966184 - 1964961 - | secretion protein HlyD Acid345_1622 1967168 - 1966413 - | demethylmenaquinone methyltransferase Acid345_1623 1967411 - 1968610 + | 6-phosphofructokinase TERM 1531 1968658 - 1968699 + T 74 -11 -3.23296 | gap 1, opp_overlap 1968665, overlap 1968665 TCAGGATGACAGAAA TGAGAAAGCCCCA-GCGAG TAGAT TTCGCCTGGGGCTTTTGCA TTAGTGGCTATTCTT TERM 1532 1968692 - 1968665 - T 80 -9.2 -4.19307 | gap 1, opp_overlap 1968658 1968665 GACAGAAATGAGAAA GCCCCA-GCGA GTAGATT TCGCCTGGGGC TTTTGCATTAGTGGC TERM 1533 1968665 - 1968692 + T 86 -9.9 -4.30014 | gap 1, opp_overlap 1968665, overlap 1968658 GACAGAAATGAGAAA GCCCCA-GCGAG TAGAT TTCGCCTGGGGC TTTTGCATTAGTGGC Acid345_1624 1971871 - 1968707 - | hypothetical protein Acid345_1625 1972105 - 1973265 + | hypothetical protein Acid345_1626 1974132 - 1973269 - | hypothetical protein TERM 1534 1973655 - 1973624 - G 77 -2.3 -5.04249 | gap 1, overlap 1973625 TTCGGAAAAAAGAAA TTGTGCGTGCGTGC GGTGA GCACGAACGGA-AA TGGAAGCGAGCGGGC TERM 1535 1974167 - 1974189 + r 74 -10.6 -3.51137 | opp_overlap 1974167 TTGCCTACGAGAAAA GCCCCATC GATTGAA GATGGGGC TTGTATCAGCTAGTT TERM 1536 1974189 - 1974167 - R 93 -10.6 -4.46212 | opp_overlap 1974167 TTGCCTACGAGAAAA GCCCCATC GATTGAA GATGGGGC TTGTATCAGCTAGTT Acid345_1627 1975683 - 1974220 - | major facilitator transporter TERM 1537 1975478 - 1975462 - G 78 -9.4 -3.94877 | ACGTCCGAAGAACAA TGCGCC GAATG GGCGCA CGAGGAAGCCGACGG TERM 1538 1975909 - 1975889 - R 77 -8.2 -4.09511 | opp_overlap 1975903 AACATTCGCGGAAAA GCCGCAGG GACTG CCTCCGGC TCTGGAGTTGTGGAA Acid345_1628 1977774 - 1975936 - | hypothetical protein TERM 1539 1976978 - 1976988 + g 71 -6.8 -4.1822 | TCCAACGCGTGCAGC CGGA AGA TCCG TTTATTCGACTCCAG Acid345_1629 1977939 - 1978376 + | hypothetical protein Acid345_1630 1978380 - 1979144 + | pseudouridine synthase, Rsu Acid345_1631 1979150 - 1980295 + | LacI family transcription regulator Acid345_1632 1980372 - 1981253 + | creatininase Acid345_1633 1983158 - 1981254 - | hypothetical protein Acid345_1634 1983672 - 1984094 + | hypothetical protein Acid345_1635 1984807 - 1984049 - | flagellar motor switch FliN Acid345_1636 1985808 - 1984819 - | flagellar motor switch protein FliM TERM 1540 1985198 - 1985167 - G 70 -4.4 -4.41206 | gap 1, overlap 1985168 AACGACGGCAGAAAA CGCCAGATT-CAGCG AGC CGCGACAACCTGGCA TCTCCAATTCGAAAC Acid345_1637 1986581 - 1985793 - | sigma 28 Acid345_1638 1988670 - 1986592 - | flagellar biosynthesis protein FlhA Acid345_1639 1989738 - 1988683 - | type III secretion exporter Acid345_1640 1990503 - 1989742 - | flagellar biosynthetic protein FliR Acid345_1641 1990779 - 1990510 - | export protein FliQ fliP 1991518 - 1990784 - | flagellar biosynthesis protein FliP Acid345_1643 1991814 - 1991515 - | hypothetical protein Acid345_1644 1992140 - 1991811 - | surface presentation of antigens (SPOA) protein Acid345_1645 1993381 - 1992152 - | flagellar basal body FlaE Acid345_1646 1993661 - 1993383 - | putative basal-body rod modification protein FlgD Acid345_1647 1996030 - 1993670 - | hypothetical protein Acid345_1648 1996552 - 1996103 - | hypothetical protein Acid345_1649 1997862 - 1996549 - | ATPase FliI/YscN Acid345_1650 1998525 - 1997869 - | flagellar biosynthesis/type III secretory pathway protein-like TERM 1541 1998328 - 1998352 + g 74 -7.9 -4.12902 | gap 1 GGCGCGCAATTCGCC GTCGCG-CTC GCCCTG GAGACGCGAC TTTTCGAGCTGCTTC Acid345_1651 1999525 - 1998509 - | flagellar motor switch protein FliG Acid345_1652 2001111 - 1999522 - | flagellar M-ring protein FliF Acid345_1653 2001424 - 2001134 - | flagellar hook-basal body complex protein (FliE) Acid345_1654 2001872 - 2001435 - | flagellar basal-body rod protein FlgC Acid345_1655 2002231 - 2001875 - | flagellar basal-body rod protein FlgB TERM 1542 2002008 - 2002044 + g 71 -8 -3.96216 | gap 1 TTATTGCCATCAGGA CGCTCGACGAGTCCCGG GACG TTGCGACTCG-CGAGTG TTGTTTGGCTGCCCC Acid345_1656 2003372 - 2002212 - | sigma-54 activating ATPase TERM 1543 2003300 - 2003260 - G 73 -12.5 -2.78384 | TGCGCCTCCAGTACA GGCCGCCAGGTAGTCGGCA GCG TGTCGATCACCTGGCGACG AAACGCCGGGTTCGG TERM 1544 2003452 - 2003434 - R 71 -7.4 -3.96148 | opp_overlap 2003434 GCTGGCGATTAGAAA CTTCACAG AAT CGGTGAAG TCTGTGGACACTCCT Acid345_1658 2004403 - 2003711 - | two component transcriptional regulator Acid345_1659 2005570 - 2004416 - | PAS/PAC sensor signal transduction histidine kinase TERM 1545 2006083 - 2006069 - g 70 -2.1 -4.83722 | gap 1, overlap 2006076 AATATGACAACAAAA CGG-GA AACG TCACCG CTCGCGGCGAAGTGG Acid345_1660 2005726 - 2008008 + | OstA-like protein Acid345_1661 2008008 - 2008736 + | ABC transporter, ATPase subunit Acid345_1662 2008874 - 2010607 + | sigma-54, RpoN Acid345_1663 2012096 - 2010699 - | phytoene dehydrogenase, putative Acid345_1664 2013733 - 2012105 - | hypothetical protein TERM 1546 2013254 - 2013238 - G 100 -5.8 -5.76949 | overlap 2013248 GAGGCGCAAAAAAAA GGCAGA TGAAT CCTGCC TCCAGCAGCATGCCG Acid345_1665 2015938 - 2014673 - | hypothetical protein TERM 1547 2014957 - 2014934 - G 75 -5.2 -4.68545 | gap 1, opp_overlap 2014956, overlap 2014949 ATTGAATACATAAAA CCCGTATTCCG AAA CGGC-CACGGG CTCCCAATAGCCTGG Acid345_1666 2017232 - 2015940 - | putative transcriptional regulator Acid345_1667 2017413 - 2017661 + | hypothetical protein Acid345_1668 2019271 - 2017826 - | hypothetical protein Acid345_1669 2019749 - 2020225 + | 3-demethylubiquinone-9 3-methyltransferase Acid345_1670 2020859 - 2021455 + | SSU ribosomal protein S30P / sigma 54 modulation protein TERM 1548 2021474 - 2021504 + F 95 -14.1 -3.57309 | overlap 2021478 CTTGGAAATTTTGGA CAGGTCGGGACAC GATGA GTGTCCCGATTTG TTTGGGGAAATTTTG TERM 1549 2021478 - 2021500 + F 100 -13.5 -4.41616 | overlap 2021474 GAAATTTTGGACAGG TCGGGACAC GATGA GTGTCCCGA TTTGTTTGGGGAAAT Acid345_1671 2021520 - 2022020 + | hypothetical protein TERM 1550 2022051 - 2022027 - T 100 -15.7 -5.06414 | overlap 2022028 CGCGGGTAATAAAAA CGCCCGGCGAA GTT CTCGCCGGGCA GAGATGCAGAGGCGG TERM 1551 2022050 - 2022028 - T 100 -17 -3.63367 | overlap 2022027 GCGGGTAATAAAAAC GCCCGGCGAA GTT CTCGCCGGGC AGAGATGCAGAGGCG Acid345_1672 2024781 - 2022067 - | methyl-accepting chemotaxis sensory transducer TERM 1552 2022428 - 2022398 - G 76 -13.3 -2.78463 | gap 1, opp_overlap 2022396 2022417 ATCTGGTTGATGACA GCGCCGATCTCGGC GATG GCCGAGA-CTGCGC CAGTGGTGTCGGTTT TERM 1553 2024206 - 2024236 + g 84 -3.8 -5.26119 | overlap 2024208 CATGAATCCGACGAT TTGCTGAGTCGCGG AAG CCGCGAGTGCGCTA TTTTCTTTTTCGCGC TERM 1554 2024208 - 2024234 + g 72 -6.4 -4.25502 | overlap 2024206 TGAATCCGACGATTT GCTGAGTCGCGG AAG CCGCGAGTGCGC TATTTTCTTTTTCGC TERM 1555 2025244 - 2025279 + H 72 -2.5 -4.92314 | overlap 2025246 GGGATACGAAGAGGA TTTGGAGGCTTACGC GATGCA GGGTGAGGCTCCGGA TTTTTATAGCTTGGT Acid345_1673 2025480 - 2026313 + | catalase TERM 1556 2026331 - 2026349 + T 90 -13.1 -3.83844 | opp_overlap 2026325 ATGAACTCACCACGA GCGGCCC CATGT GGGCCGC TTATTAATTGGTGGA Acid345_1674 2027102 - 2026353 - | molybdenum ABC transporter, periplasmic molybdate-binding protein TERM 1557 2027145 - 2027164 + r 70 -9.2 -3.62046 | opp_overlap 2027157 2027158, overlap 2027146 2027148 AATGGATTGGGAGTC GCAGGGGC TAAA GCCCCTGA TTATTCAGGGAGTCC TERM 1558 2027146 - 2027163 + r 76 -12.7 -2.77013 | opp_overlap 2027157 2027158, overlap 2027145 2027148 ATGGATTGGGAGTCG CAGGGGC TAAA GCCCCTG ATTATTCAGGGAGTC Acid345_1675 2027600 - 2027319 - | deiodinase, iodothyronine, type I TERM 1559 2027519 - 2027543 + g 71 -10 -3.63341 | gap 1, overlap 2027540 2027542 TGCCAAGCTTGCGGA CGCAGCTTCCG GCAA CGGAGGC-GCG TTCTTCGAGCGTCTT Acid345_1676 2028068 - 2027715 - | hypothetical protein Acid345_1677 2029388 - 2028162 - | Alpha-galactosidase TERM 1560 2029086 - 2029100 + g 71 -10 -3.60098 | opp_overlap 2029074, overlap 2029074 GAATCGTTGTGGATC GGCAAC GAT GTTGCC TTTCCCGTCGCGGCT Acid345_1678 2029530 - 2032490 + | hypothetical protein TERM 1561 2032602 - 2032636 + G 73 -12.3 -3.16191 | overlap 2032608 TATTCCTGACTCCGG CCGGAATGGCGAA GGCGCTTGG TTCGCCATTCTGG TTGCTCGCGGTGTGG Acid345_1679 2032538 - 2033860 + | amino acid transporter Acid345_1680 2033876 - 2034148 + | hypothetical protein TERM 1562 2034379 - 2034391 + G 75 -5.5 -4.57341 | overlap 2034373 GGCGGTTTACATCAT CGCGA TGT TTGCG TTTTTCAACCGGGTT Acid345_1681 2034200 - 2034466 + | hypothetical protein TERM 1563 2034517 - 2034473 - f 85 -9.4 -4.44448 | gap 1, opp_overlap 2034473 2034471 2034474 2034476, overlap 2034474 ACGACTTGAAATAAA CCAGCGCCGC-CGGATT GCATGCTGCGAA AATCCGCGCGGCGCTGC TCTTATAATCATCCA TERM 1564 2034516 - 2034474 - f 83 -12.9 -3.25946 | gap 1, opp_overlap 2034473 2034471 2034474 2034476, overlap 2034473 CGACTTGAAATAAAC CAGCGCCGC-CGGATT GCATGCTGCGAA AATCCGCGCGGCGCTG CTCTTATAATCATCC TERM 1565 2034474 - 2034516 + F 75 -12.9 -2.57243 | gap 1, opp_overlap 2034474 2034473, overlap 2034473 2034471 2034476 CGACTTGAAATAAAC CAGCGCCGC-CGGATT GCATGCTGCGAA AATCCGCGCGGCGCTG CTCTTATAATCATCC Acid345_1682 2034560 - 2037943 + | TPR repeat-containing protein Acid345_1683 2037997 - 2040825 + | TPR repeat-containing protein Acid345_1684 2040831 - 2042552 + | ASPIC/UnbV TERM 1566 2042664 - 2042608 - g 100 -11.6 -5.75342 | gap 1, overlap 2042610 TCTTCGTAAAAAAAA GCTTTCA-CCGCTCGAACTCGTGGAAG AGCA CATCCACCAGATCGAGCGGCTGAATCC CAAGCTCAACGCGCT TERM 1567 2042662 - 2042610 - g 76 -12.8 -3.01966 | gap 1, overlap 2042608 TTCGTAAAAAAAAGC TTTCA-CCGCTCGAACTCGTGGAAG AGCA CATCCACCAGATCGAGCGGCTGAAT CCCAAGCTCAACGCG Acid345_1685 2042549 - 2043949 + | amidase Acid345_1686 2045020 - 2043950 - | LacI family transcription regulator Acid345_1687 2046125 - 2045043 - | LacI family transcription regulator TERM 1568 2046643 - 2046633 - g 76 -6.8 -4.46212 | CGCGCCATTACAAAA TGCC GGT GGCA AGAAGCCGGGATTAC TERM 1569 2047620 - 2047600 - g 81 -12.5 -3.55801 | ACGAACGCCTGGAAA CTCGCGCGC ACC GCGCTCGAG CAAGGGAATGACTGG Acid345_1688 2046502 - 2048937 + | hypothetical protein Acid345_1689 2048956 - 2050053 + | glycoside hydrolase family protein Acid345_1690 2051746 - 2050058 - | integrin-like protein Acid345_1691 2052369 - 2051743 - | two component LuxR family transcriptional regulator Acid345_1692 2053697 - 2052366 - | periplasmic sensor signal transduction histidine kinase Acid345_1693 2054223 - 2053714 - | hypothetical protein Acid345_1694 2054349 - 2055260 + | glyoxalase/bleomycin resistance protein/dioxygenase Acid345_1695 2055283 - 2056140 + | sugar phosphate isomerases/epimerases TERM 1570 2056171 - 2056151 - f 100 -14 -6.21477 | AATAGCAAAAAAAAA GGCTCGGC GGAGA GCCGAGCC GTCCGAAAAACCGGC TERM 1571 2056196 - 2056182 - f 71 -4.9 -4.57073 | GAGCCGTCCGAAAAA CCGGC GGGAG ACCGG TCTCGGTGGTCGAGT Acid345_1696 2056358 - 2057248 + | sugar kinase TERM 1572 2057845 - 2057830 - g 70 -4.6 -4.5464 | opp_overlap 2057841, overlap 2057832 CATAGAGAAGGAAAA GGTGCC CGTC GGCATC ATGGAAGCTGATTGG TERM 1573 2058544 - 2058512 - g 90 -7 -5.06816 | gap 1 ACGCGCGAAGAAAAA GCCCTCCGCAT-CTC ATTC GATCACGCGGAGAGC TTGCAGGCAGGGAAG Acid345_1697 2057264 - 2058775 + | sialate O-acetylesterase Acid345_1698 2060077 - 2058776 - | outer membrane efflux protein Acid345_1699 2063208 - 2060074 - | acriflavin resistance protein Acid345_1700 2064461 - 2063208 - | secretion protein HlyD Acid345_1701 2065318 - 2066514 + | galactokinase Acid345_1702 2066511 - 2067506 + | UDP-galactose 4-epimerase TERM 1574 2067525 - 2067537 + G 75 -10.5 -3.65902 | ACGCGACGAAGTCCA CGCCG CAT CGGCG TTTCAATCCGCTCAC TERM 1575 2067803 - 2067824 + G 78 -7.9 -4.55295 | opp_overlap 2067801 2067806, overlap 2067806 CTCATCGCACAAAGT GAACGCGGT ATCT GCCGCGTCC TTTGTTTCTCACCGC Acid345_1703 2067503 - 2068549 + | galactose-1-phosphate uridylyltransferase Acid345_1704 2069607 - 2068555 - | hydrogenase expression/formation protein HypE TERM 1576 2069077 - 2069102 + g 95 -14.7 -3.727 | opp_overlap 2069067 AAGGATCGCGTCGCC CGAACGGACCG CGCT CGGTCCGATCG TTTGCGTATGCTCAA Acid345_1705 2070719 - 2069604 - | hydrogenase expression/formation protein HypD Acid345_1706 2070964 - 2070716 - | hydrogenase assembly chaperone hypC/hupF TERM 1577 2071125 - 2071137 + H 74 -3.4 -4.89339 | opp_overlap 2071125 AACCCGAAGTTAGAA GTTG GTAAA CAAC TTTTTCTAAGTGCTT Acid345_1707 2071408 - 2071785 + | PadR family transcriptional regulator Acid345_1708 2071788 - 2074454 + | ABC efflux pump, inner membrane subunit Acid345_1709 2075715 - 2074654 - | beta-lactamase-like TERM 1578 2075071 - 2075055 - G 78 -7.9 -4.45544 | opp_overlap 2075054, overlap 2075058 2075059 CGCGAGGAAGGAAAA CGATGGC ATC GCCTTCG GTGTTGCCGCGGCCC TERM 1579 2075846 - 2075812 - R 100 -23 -4.52589 | opp_overlap 2075809 2075808, overlap 2075841 CGGGGGCAGAGAAAA GCCCCACCCTACGGAC TAC GTCCGTAGAATGGGGC ACCCTGTTATGAACT Acid345_1710 2077428 - 2075860 - | hypothetical protein TERM 1580 2077575 - 2077548 - H 100 -11.3 -5.60993 | overlap 2077550 TTGTGGAGAAAAAAA GACGCCGTGGT TCGAGG ACCACGGCGTT CGCCACTTGCGATAA TERM 1581 2077573 - 2077550 - H 100 -13.9 -4.45201 | overlap 2077548 GTGGAGAAAAAAAGA CGCCGTGGT TCGAGG ACCACGGCG TTCGCCACTTGCGAT Acid345_1711 2077840 - 2079084 + | hypothetical protein Acid345_1712 2079140 - 2080573 + | beta-lactamase Acid345_1713 2080828 - 2081049 + | hypothetical protein Acid345_1714 2082745 - 2081336 - | glucosamine-1-phosphate N-acetyltransferase / UDP-N-acetylglucosamine pyrophosphorylase TERM 1582 2081422 - 2081432 + g 71 -6.8 -4.21462 | CGATCGCCAGTGCAT CGTC GGG GACG TTTTCGGTAATGCAT Acid345_1715 2083796 - 2082915 - | hypothetical protein TERM 1583 2083928 - 2083911 - H 100 -12.7 -5.1287 | TGCAGATGCAAAAAA GGCCAGC TTGC GCTGGCC GGGGTAGCGGAGAGA Acid345_1716 2084419 - 2085027 + | hypothetical protein TERM 1584 2085049 - 2085074 + F 85 -15.5 -2.64155 | opp_overlap 2085053 2085054, overlap 2085054 CAAATTCGGTGGTAG CAAAGGCGGCC TGCG GGCCGCTTTTG TGCGTTTGGCGAGGA TERM 1585 2085054 - 2085069 + F 95 -11.8 -4.51196 | opp_overlap 2085053 2085054, overlap 2085049 TCGGTGGTAGCAAAG GCGGCC TGCG GGCCGC TTTTGTGCGTTTGGC TERM 1586 2085069 - 2085054 - f 72 -11.8 -2.83403 | opp_overlap 2085054 2085049, overlap 2085053 TCGGTGGTAGCAAAG GCGGCC TGCG GGCCGC TTTTGTGCGTTTGGC Acid345_1717 2085231 - 2085785 + | hypothetical protein Acid345_1718 2085882 - 2086568 + | TetR family transcriptional regulator Acid345_1719 2086610 - 2087557 + | secretion protein HlyD Acid345_1720 2087554 - 2088501 + | ABC transporter, ATPase subunit TERM 1587 2088825 - 2088865 + G 80 -9.6 -4.24342 | GTTGTCAACATTCCG GCCGGATTCACGCGGC AACTGTTGC GCCACGAGCATCCGGC TTTATTGGTGGAAGC Acid345_1721 2088498 - 2089640 + | ABC multidrug efflux pump, inner membrane subunit Acid345_1722 2089650 - 2090915 + | ABC efflux system, outer membrane lipoprotein, NodT Acid345_1723 2090968 - 2091144 + | hypothetical protein TERM 1588 2091188 - 2091167 - T 100 -11.6 -5.18726 | opp_overlap 2091166 2091165 GCTGGAGAAGAAAAA GGCGCTCA GGCAGG TGAGCGCC CCTTTGTGTCGGTGC Acid345_1724 2091723 - 2091211 - | hypothetical protein TERM 1589 2091853 - 2091829 - R 86 -12.8 -3.69333 | opp_overlap 2091820 CAGAATGCAGGGAAA GCTGGCGGGC GCGGG GCTCGCCAGC TCGTACGGTGCTCAG Acid345_1725 2092725 - 2091865 - | OmpA/MotB family outer membrane protein TERM 1590 2092039 - 2092056 + g 84 -12.7 -3.74251 | opp_overlap 2092038 2092033 2092041 CATCAAGAAGTTAAC GACCGCG AATG CGCGGTC TTTGCTGAGGGTCTG Acid345_1726 2094047 - 2092821 - | hypothetical protein TERM 1591 2094091 - 2094117 + H 74 -10.8 -3.59262 | overlap 2094092 TATCGCATTGGTTCG GCCTCGCGAGTG ATC CACTCGGGAGGA TTTGGAGATGTCCAC TERM 1592 2094092 - 2094116 + H 83 -14.3 -2.75343 | overlap 2094091 ATCGCATTGGTTCGG CCTCGCGAGTG ATC CACTCGGGAGG ATTTGGAGATGTCCA Acid345_1727 2094183 - 2094893 + | hypothetical protein TERM 1593 2094936 - 2094957 + T 86 -10.1 -4.22554 | overlap 2094937 GTGGAGCTTGGCTTG TCCCACCAC TCTC GTGGTGGGC TTATTTATTGCGTCG TERM 1594 2094937 - 2094956 + T 84 -13.6 -3.12809 | overlap 2094936 TGGAGCTTGGCTTGT CCCACCAC TCTC GTGGTGGG CTTATTTATTGCGTC Acid345_1728 2096753 - 2094993 - | L-lactate transporter Acid345_1729 2097037 - 2097654 + | ErfK/YbiS/YcfS/YnhG TERM 1595 2097693 - 2097665 - f 81 -8.2 -4.30978 | gap 1, overlap 2097666 2097685 TCTAACGGACGAAAA TCCCCACCCCTAA CAAG TTAGGG-TGGGGC ACCCAGTGTGAGTAA TERM 1596 2097692 - 2097666 - f 78 -11.7 -3.18105 | gap 1, overlap 2097665 2097685 CTAACGGACGAAAAT CCCCACCCCTAA CAAG TTAGGG-TGGGG CACCCAGTGTGAGTA Acid345_1730 2097969 - 2099282 + | SPFH domain-containing protein/band 7 family protein TERM 1597 2099410 - 2099371 - gf 85 -9.3 -4.4078 | opp_overlap 2099365, overlap 2099372 TGTGGCGAATGAAAA GCCGGGTGAGG-GAGGAGC CGCC GC-CCTCTCCTCATCCGGT TCGACATTGTGGATA TERM 1598 2099409 - 2099372 - gf 83 -12.8 -3.24146 | opp_overlap 2099365, overlap 2099371 GTGGCGAATGAAAAG CCGGGTGAGG-GAGGAGC CGCC GC-CCTCTCCTCATCCGG TTCGACATTGTGGAT Acid345_1731 2099364 - 2100689 + | hypothetical protein Acid345_1732 2100652 - 2101995 + | ABC peptide transporter, periplasmic ligand binding protein Acid345_1733 2101992 - 2103776 + | periplasmic sensor signal transduction histidine kinase Acid345_1734 2103773 - 2105158 + | two component, sigma54 specific, Fis family transcriptional regulator Acid345_1735 2106292 - 2105186 - | glycine oxidase ThiO TERM 1599 2108445 - 2108461 + G 71 -7.2 -4.20712 | TTCATTGAACTGGAG CGCGCC CGTGA GGTGCG TTTTAGCGTGTTGTG Acid345_1736 2106348 - 2108561 + | TPR repeat-containing serine/threonin protein kinase TERM 1600 2109391 - 2109403 + G 75 -10.5 -3.64703 | opp_overlap 2109385, overlap 2109374 CGGAGACGACGATCT CCGGC TTT GCCGG TTTCGATCCGGCAGG Acid345_1737 2108706 - 2110127 + | peptidase C45, acyl-coenzyme A--6-aminopenicillanic acid acyl-transferase Acid345_1738 2110488 - 2110141 - | hypothetical protein Acid345_1739 2110629 - 2111603 + | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase TERM 1601 2112253 - 2112231 - g 71 -7.7 -3.95584 | overlap 2112217 2112233 TCCCGACGAAGCAAA CATCGACGA GCTGT TCGTCGAAG GGCGTCACGCCAATT Acid345_1740 2111617 - 2113590 + | squalene cyclase Acid345_1741 2113594 - 2114580 + | NAD-dependent epimerase/dehydratase TERM 1602 2114986 - 2115032 + G 74 -7.3 -4.4009 | gap 2, opp_overlap 2114987 2114991, overlap 2114987 CCGACGCTATCGAAA TGGAAG-CCGCAGGCGTT-GCGA GCA TCGCTGATTCCTGCGGACTGCCG TTTTATGCCGTGAAG Acid345_1742 2114580 - 2115287 + | purine phosphorylases family protein 1 Acid345_1743 2115301 - 2116425 + | alcohol dehydrogenase GroES-like protein Acid345_1744 2116434 - 2117471 + | zinc-binding alcohol dehydrogenase TERM 1603 2117689 - 2117700 + G 75 -5.8 -4.61633 | opp_overlap 2117689 2117688 TTCCTGCCCAAACAT CTGC ATCA GCAG TTTTTCAACGTCTAT Acid345_1745 2117563 - 2118444 + | squalene/phytoene synthase Acid345_1746 2118441 - 2119391 + | farnesyl-diphosphate farnesyltransferase TERM 1604 2119762 - 2119774 + G 78 -6.2 -4.66833 | overlap 2119747 GCCCGCGCCGCTCCA CGCC TCGCC GGCG TTTTTGAAGTTCAAA TERM 1605 2120650 - 2120666 + G 74 -2.1 -4.87665 | opp_overlap 2120652, overlap 2120652 CCGCCCGCTCCCAAT CACGCCG TGG CCGCGTA TTTTTCTAAGTGGCG Acid345_1747 2119388 - 2120833 + | carotene 7,8-desaturase Acid345_1748 2120947 - 2122626 + | cyclic nucleotide-regulated FAD-dependent pyridine nucleotide-disulphide oxidoreductase Acid345_1749 2122686 - 2123480 + | UbiE/COQ5 methyltransferase Acid345_1750 2123790 - 2123473 - | CutA1 divalent ion tolerance protein Acid345_1751 2123905 - 2125308 + | phosphoglucomutase/phosphomannomutase alpha/beta/subunit TERM 1606 2125468 - 2125456 - g 83 -5.5 -4.98911 | TACCAGAAAAAGAAA GCCGA GTA TCAGC GGCTGCAAGGCGAGT Acid345_1752 2125312 - 2125677 + | cell division protein FtsB Acid345_1753 2125808 - 2126128 + | hypothetical protein TERM 1607 2126157 - 2126180 + G 91 -13.2 -4.08557 | ATTTTCATCTGTACA TGGCGTTCGT ATTC ACGAGCGCCA TTGTTATTTGCACGC TERM 1608 2126713 - 2126744 + G 74 -13 -2.89714 | gap 1, overlap 2126713 2126710 2126737 GGTCAGGGTGAGTTA TGCCAGCGGCGG-CA TTT TGATCGCCGCCGGCA TCGTTGTGCTTGCGT Acid345_1754 2126138 - 2126773 + | lysine exporter protein LysE/YggA thiG 2127540 - 2126770 - | thiazole synthase Acid345_1756 2129463 - 2127619 - | hypothetical protein TERM 1609 2128046 - 2128030 - G 70 -4.3 -4.62069 | GTGCGACCCGAAAAA CCAATCC TGC GGCTCGG TCCCATTAACCAGCT TERM 1610 2128166 - 2128142 - G 79 -12.9 -3.23452 | ACCTTCACAACCCAA TTCTGGTGGCG AAT CGACACCAGAA GATTGCCGTCATCCG TERM 1611 2129823 - 2129854 + G 88 -5.8 -5.33405 | opp_overlap 2129826, overlap 2129826 TACCCCTACTTCCAA TAAGCGGCTGAACG AGCT CGTTGGGCTGCTGA TTTTTCTTTCCTCCA Acid345_1757 2129770 - 2132265 + | DNA translocase FtsK TERM 1612 2132291 - 2132314 + F 100 -16 -5.06414 | opp_overlap 2132288, overlap 2132292 TGTAGTAAGTCAGCT TGGCGCGACC AAAT GGTCGCGCCG TTTTTATTGCGGCCA TERM 1613 2132292 - 2132313 + F 100 -17.3 -3.63367 | opp_overlap 2132288, overlap 2132291 GTAGTAAGTCAGCTT GGCGCGACC AAAT GGTCGCGCC GTTTTTATTGCGGCC Acid345_1758 2132397 - 2132729 + | DNA uptake protein and related DNA-binding proteins Acid345_1759 2134019 - 2132757 - | hypothetical protein TERM 1614 2133810 - 2133828 + g 76 -11.7 -3.33162 | opp_overlap 2133808 CTCGCGCAACGCATA CGGCACC TCCTT GGTGCCG TTGTAGAGTCGGATA TERM 1615 2133998 - 2133986 - G 78 -4.1 -4.87803 | CACCTGCAAAGAAAA GAAGT GCA ACTCC ACAGATTCGTCGGAT TERM 1616 2134243 - 2134289 + G 74 -11.4 -3.53012 | opp_overlap 2134241 2134239 2134237 TACAGAAATGATAGG CCGCTACGAGATCCTCGCGG AAATTGG CCGCGGCGAACTCGGTGCGG TTTACCAGGGACACG Acid345_1760 2134235 - 2135434 + | serine/threonine protein kinase Acid345_1761 2136304 - 2135435 - | hypothetical protein Acid345_1762 2137223 - 2136333 - | hypothetical protein TERM 1617 2136998 - 2136972 - G 78 -4.3 -5.0133 | opp_overlap 2136959 CACTGGCCGAAAAAA CTGGCGGTCCA TCTTC TCATCCGCCAG GATGTTCGGCAGTCG Acid345_1763 2138109 - 2137234 - | hypothetical protein Acid345_1764 2139873 - 2138110 - | membrane protein TERM 1618 2138510 - 2138535 + g 75 -5.3 -4.62783 | overlap 2138511 CCAGCTGCGAGTCCA CCGGAGCGCTC ATCA GAACGTTCCGA TTTTTGCGCTCCGTA TERM 1619 2139777 - 2139810 + g 75 -10.2 -3.72141 | GAGGCCTTGGCTGAA CCGGGACTGGTTGC GGCGGA GCAACCGGAGCCGG TTTCGCTGTCGCTGT TERM 1620 2140088 - 2140109 + H 91 -14.5 -3.03338 | opp_overlap 2140084 GCGCCAATTTACGGC CTTGGGCAG TAAA CTGCCCAAG TGTTCCCGCGCTTCT Acid345_1765 2140165 - 2140506 + | anti-sigma-factor antagonist TERM 1621 2140553 - 2140514 - T 81 -12.9 -3.09516 | gap 1 CGTTCTAGGATTCAA GTGTGCCTCATCGTCCCG CCCCC CGGGCTG-TGAGGCACAC GCTCCAAACTCCTCC Acid345_1766 2141543 - 2141067 - | hypothetical protein Acid345_1767 2141739 - 2143040 + | YVTN beta-propeller repeat-containing protein TERM 1622 2143064 - 2143084 + T 100 -14 -4.68601 | opp_overlap 2143058 2143064 TCAAGCAAACGAGAA GGGTGGGC AAAAA GCCCACCC TTTATTCTTTTCACT TERM 1623 2143084 - 2143064 - T 95 -14 -3.65036 | opp_overlap 2143064, overlap 2143058 TCAAGCAAACGAGAA GGGTGGGC AAAAA GCCCACCC TTTATTCTTTTCACT Acid345_1768 2143605 - 2143108 - | CheC-like protein Acid345_1769 2144057 - 2143602 - | response regulator receiver protein, CheY Acid345_1770 2145211 - 2144120 - | response regulator receiver modulated CheB methylesterase Acid345_1771 2147391 - 2145208 - | CheA signal transduction histidine kinases TERM 1624 2146221 - 2146195 - G 81 -12.2 -3.77607 | AACAATGCGAGGAAA GCGCCGGAAGAG TTG CTCCACCGGCAC CATGCGGATCTTCAT Acid345_1772 2148292 - 2147393 - | MCP methyltransferase, CheR-type TERM 1625 2148479 - 2148517 + r 76 -9.6 -3.90112 | gap 1, overlap 2148446 CGCTAGGCGACACCG GCAGCATCGGCGGCTTC CTCTGC GAGGTCGCCAATGC-GC TTTAATTCGCCACGC Acid345_1773 2148951 - 2148466 - | CheW protein Acid345_1774 2150978 - 2148963 - | methyl-accepting chemotaxis sensory transducer Acid345_1775 2151401 - 2151033 - | TonB-like protein TERM 1626 2154836 - 2154821 - g 89 -6.1 -5.03314 | opp_overlap 2154820, overlap 2154823 TCCACTCCGAAAAAA TGGCC GCCGTT GGCCA GCTTGTTTCTGGCGT Acid345_1776 2151748 - 2155515 + | signal transduction histidine kinase, nitrogen specific, NtrB Acid345_1777 2155512 - 2155901 + | response regulator receiver protein Acid345_1778 2155898 - 2157298 + | two component, sigma54 specific, Fis family transcriptional regulator Acid345_1779 2157498 - 2157845 + | hypothetical protein Acid345_1780 2157842 - 2159386 + | hypothetical protein TERM 1627 2160032 - 2160010 - g 71 -7.6 -4.08767 | opp_overlap 2160022, overlap 2160011 CTTACCTTCGCAAAA CGCGACTCGC AGC GCGAACCGCT CGCGTATGTTCGCTC Acid345_1781 2159383 - 2160075 + | histidine kinase A-like Acid345_1782 2162203 - 2160215 - | excinuclease ABC subunit B TERM 1628 2162101 - 2162111 + g 71 -6.8 -4.11216 | CGGTTACGCCGAGCA GCAC CTG GTGC TTTTCGCCGTCGCGA Acid345_1783 2162460 - 2163500 + | acyltransferase 3 Acid345_1784 2164177 - 2163497 - | HAD family hydrolase Acid345_1785 2164291 - 2165301 + | NAD-dependent epimerase/dehydratase TERM 1629 2166348 - 2166321 - g 84 -7 -4.79223 | gap 1, overlap 2166322 TCAGACGACGAAAAA CTCTATCGCCCGG AAG CCGAGCG-CAAAG ACGAAGCCAATCGCG Acid345_1786 2165433 - 2167643 + | dehydrogenase, E1 component TERM 1630 2167661 - 2167693 + T 86 -12.7 -3.75332 | opp_overlap 2167665, overlap 2167663 2167665 CTTCGTTCGAGCGTG AAAATGGCGCGGCCT CTG AGGTCGCGCCATCTC TTTGCCTTCAAGAGT TERM 1631 2167663 - 2167691 + T 95 -15.3 -3.46068 | opp_overlap 2167665, overlap 2167661 2167665 TCGTTCGAGCGTGAA AATGGCGCGGCCT CTG AGGTCGCGCCATC TCTTTGCCTTCAAGA TERM 1632 2167665 - 2167689 + T 100 -17.9 -3.30106 | opp_overlap 2167665, overlap 2167663 2167661 GTTCGAGCGTGAAAA TGGCGCGGCCT CTG AGGTCGCGCCA TCTCTTTGCCTTCAA TERM 1633 2167689 - 2167665 - T 100 -15.7 -4.11216 | opp_overlap 2167665 2167663 2167661 GTTCGAGCGTGAAAA TGGCGCGGCCT CTG AGGTCGCGCCA TCTCTTTGCCTTCAA Acid345_1787 2168389 - 2167718 - | RNA polymerase sigma factor Acid345_1788 2169247 - 2168453 - | plastocyanin-like protein TERM 1634 2168541 - 2168557 + g 77 -10.1 -3.85698 | GTGAGATAGGCCGTG CTCGGGG GGT CTCCGAG TTTCTGAGCCCGCCA TERM 1635 2168847 - 2168869 + g 74 -11.3 -3.55563 | gap 1, overlap 2168865 ATCGGATGGAACTGT TGCGGCGCCG TCGG CGGCGCC-CA TTTCAGAGATGCGCT Acid345_1789 2169784 - 2169248 - | hypothetical protein TERM 1636 2169912 - 2169893 - R 95 -10.7 -4.65153 | opp_overlap 2169893 2169892 TTACACAAATTAAAA GGCGCAC TCGAAG GTGCGCC CTTGTTGGAAGAACG Acid345_1790 2170337 - 2169933 - | DoxX Acid345_1791 2171519 - 2170341 - | saccharopine dehydrogenase TERM 1637 2172496 - 2172510 + G 76 -12.8 -3.15663 | GATGCACTGTTCGTA GCCCGC TGG GCGGGC TTCATCGAGATAGCT TERM 1638 2172662 - 2172647 - g 75 -10.4 -3.63895 | opp_overlap 2172645 2172651 TTGAAGGAGCGCAAA TCGGGG CCGA CCCCGA GCCTTTCGACGTAGA Acid345_1792 2171608 - 2172714 + | hypothetical protein guaA 2172757 - 2174304 + | bifunctional GMP synthase/glutamine amidotransferase protein Acid345_1794 2175379 - 2174627 - | TPR repeat-containing protein TERM 1639 2175286 - 2175300 + g 73 -12.8 -2.73681 | CGCGGGCAGCGTTTT GCGCCG CAG CGGCGC TGGTTAAGGTCCATA Acid345_1795 2177188 - 2175569 - | SSU ribosomal protein S1P Acid345_1796 2177784 - 2177245 - | hypothetical protein Acid345_1797 2178291 - 2177827 - | hypothetical protein TERM 1640 2178065 - 2178087 + g 75 -4.1 -4.72986 | overlap 2178073 2178073 2178074 AACAGTTTGGGGTCT GGATCTTTG CTCTC CGAAGAGCC TTTTTCGTAGAGATG Acid345_1798 2178409 - 2178774 + | PadR family transcriptional regulator Acid345_1799 2178761 - 2179777 + | hypothetical protein TERM 1641 2179791 - 2179831 + F 75 -12.1 -2.91912 | gap 2, opp_overlap 2179827, overlap 2179784 AAGTATTCGCGGGCT TGGCGTGCATTGTCGTATG CTCCT CGT-CG-CAATGCACGCCA TCTATGCGTAAATGG Acid345_1800 2179843 - 2180418 + | ECF subfamily RNA polymerase sigma-24 factor Acid345_1801 2180842 - 2180432 - | hypothetical protein TERM 1642 2181876 - 2181861 - g 71 -11.8 -2.89742 | opp_overlap 2181851 CTCAAGGCCCACATA CCGGCG GGGA CGCCGG TGGTGAGCGTCACTT Acid345_1802 2181054 - 2182829 + | adenylate/guanylate cyclase Acid345_1803 2183348 - 2182947 - | hypothetical protein Acid345_1804 2183622 - 2183909 + | hypothetical protein TERM 1643 2183973 - 2183991 + T 100 -12.4 -4.54727 | GTTAGGTTTTAGGGA CGGCAGCT CGT GGCTGCCG TTTTCGTTTGCGCGC Acid345_1805 2184344 - 2184018 - | hypothetical protein Acid345_1806 2186461 - 2184455 - | hypothetical protein Acid345_1807 2186690 - 2187310 + | hypothetical protein TERM 1644 2187335 - 2187314 - T 100 -14.5 -5.27335 | TCGGCGAAATAAAAA TGGGGAGCA TTGC TGCTCCCCA GAGGGTAAATCGCTA TERM 1645 2187360 - 2187382 + T 74 -7 -4.25104 | opp_overlap 2187360 TCGCTAACTACTACA CGCCGTCA TAGACCT TGACGGTG TTTTCATCAACGCCA Acid345_1808 2187963 - 2187355 - | 2-oxoglutarate ferredoxin oxidoreductase, gamma subunit Acid345_1809 2188844 - 2187945 - | 2-oxoglutarate ferredoxin oxidoreductase subunit beta Acid345_1810 2189998 - 2188841 - | 2-oxoglutarate ferredoxin oxidoreductase subunit alpha Acid345_1811 2190272 - 2189988 - | 2-oxoglutarate ferredoxin oxidoreductase, delta subunit Acid345_1812 2190510 - 2192171 + | PAS/PAC sensor hybrid histidine kinase Acid345_1813 2192158 - 2192628 + | response regulator receiver protein Acid345_1814 2192645 - 2193790 + | response regulator receiver sensor signal transduction histidine kinase TERM 1646 2194611 - 2194631 + G 82 -10.4 -4.12532 | opp_overlap 2194604 2194603, overlap 2194618 ACGACAATGCGCGGT TCTCGCGC GATGG GCGCGGGA TTTATGTGTCCACCG Acid345_1815 2193851 - 2195812 + | peptidase S9, prolyl oligopeptidase TERM 1647 2195862 - 2195919 + T 83 -14.2 -2.78463 | opp_overlap 2195862 2195864, overlap 2195864 2195872 ATTCTTTTCAACACA GAGGCTCAGTGTTCCCAGAGGTTTTT AATTGA AAGAATCTCTGGGTCCTCTGTGCCTC TGTGGTGAAAGCGAT TERM 1648 2195864 - 2195917 + T 71 -11 -2.94099 | opp_overlap 2195864 2195862, overlap 2195862 2195872 TCTTTTCAACACAGA GGCTCAGTGTTCCCAGAGGTTTTT AATTGA AAGAATCTCTGGGTCCTCTGTGCC TCTGTGGTGAAAGCG Acid345_1816 2196891 - 2195944 - | phosphoesterase TERM 1649 2197089 - 2197079 - H 75 -6.8 -4.4648 | ACTCTCAGGAGAAAA CCTC ATT GAGG CAGAGTTGCACAAAC Acid345_1817 2197153 - 2197860 + | hypothetical protein TERM 1650 2197888 - 2197905 + F 93 -10.5 -4.44667 | opp_overlap 2197888, overlap 2197904 CTGAATTGCAAAAAA GCGCGGC TTCG GTCGCGC TTTATTGTTGCGCGG TERM 1651 2197905 - 2197888 - f 95 -8.3 -5.09426 | opp_overlap 2197888 2197904 CTGAATTGCAAAAAA GCGCGGC TTCG GTCGCGC TTTATTGTTGCGCGG Acid345_1818 2198124 - 2199461 + | hypothetical protein TERM 1652 2199650 - 2199664 + G 75 -4.2 -4.73448 | overlap 2199647 GTTTGACGTGGGCAT CCAGCA GCT TGGTGG TTTTTCCGTCTATCT Acid345_1819 2199465 - 2200436 + | ornithine carbamoyltransferase Acid345_1820 2200495 - 2201487 + | carbamate kinase Acid345_1821 2201493 - 2202452 + | aspartate carbamoyltransferase TERM 1653 2202462 - 2202482 + F 100 -15.4 -4.14392 | CGATAAAGATTTCCG GGCGCCGC TGGCT GCGGCGCC TTTTGAACGTTAAGC Acid345_1822 2202522 - 2203730 + | aminotransferase TERM 1654 2203750 - 2203767 + T 100 -12.7 -4.44667 | opp_overlap 2203749 CTTTCGCGAAGGGAC GGGCTGC TGCG GCAGCCC TTTCTTATTGCACGG Acid345_1823 2204167 - 2203772 - | hypothetical protein Acid345_1824 2204632 - 2204270 - | hypothetical protein Acid345_1825 2205173 - 2204625 - | ECF subfamily RNA polymerase sigma-24 factor TERM 1655 2205246 - 2205220 - R 100 -15.2 -5.19879 | opp_overlap 2205221 2205231 GTTCAAATAGAAAAA CCCCACCCTAAC TGC GCTAGAGTGGGG TACCCATTCAGCGAC Acid345_1826 2206544 - 2205264 - | Pro-Hyp dipeptidase TERM 1656 2206618 - 2206596 - R 100 -7.6 -5.46706 | opp_overlap 2206596 ATTGTAAAACAAAAA GCGTCAGGCA TGT CGCCTAGCGC TTTGAACTCACCAAG Acid345_1827 2207355 - 2206642 - | hypothetical protein TERM 1657 2206884 - 2206903 + g 72 -9.2 -3.76482 | GACAGGTTCCGGCTG CCTCGCCC TCGA GGTCGAGG TTCTTGGTCATGTCC Acid345_1828 2208809 - 2207520 - | outer membrane efflux protein TERM 1658 2208779 - 2208740 - G 95 -14.2 -3.66908 | overlap 2208736 CTTTGTTAAAAGGAA CTGTCTCAGCGCGCAGCG TGGT CGCCGCGAGCAGAGAAAG CAAAGCGAGCTTCTT Acid345_1829 2209839 - 2208871 - | TPR repeat-containing protein Acid345_1830 2211185 - 2209836 - | secretion protein HlyD TERM 1659 2210703 - 2210723 + g 82 -14 -3.18681 | overlap 2210696 2210698 GACCTCTTCGCGGCT GCCGCCGT TCTGC ACGGCGGC TTGCTCGGCTTGGGC TERM 1660 2211867 - 2211827 - g 70 -12 -2.73364 | gap 1 GCTTCAGCGGAATGA TTGAGTCTCT-GAACGTCG CTTA CGGCGTTCCAGAGACTCGA GCCTGGTGGAAGACA Acid345_1831 2211376 - 2212401 + | ribonuclease BN, putative Acid345_1832 2212429 - 2212827 + | GTP cyclohydrolase I TERM 1661 2212828 - 2212842 + T 71 -7.8 -3.97674 | opp_overlap 2212824 2212827 AGGCCGAAGAAGTAG CCGCTA CTC TGGCGG TTGTTTCGCTCCTGG Acid345_1833 2214267 - 2212831 - | hypothetical protein TERM 1662 2213054 - 2213037 - G 71 -7.7 -3.9941 | gap 1, opp_overlap 2213046 CGGTCCAGAAGTAAA CGCTGCAC TGA GTGC-GCG GCGCGCAAAGCGTGT TERM 1663 2214646 - 2214665 + G 74 -11.4 -3.53444 | overlap 2214647 GTTTTGCACCTTTCG TCGGTCCG TTGG CGGACCGG TTTACCCGCAAATAC TERM 1664 2214647 - 2214664 + G 73 -12.7 -2.71924 | overlap 2214646 TTTTGCACCTTTCGT CGGTCCG TTGG CGGACCG GTTTACCCGCAAATA TERM 1665 2214923 - 2214950 + G 73 -11.2 -3.39327 | GGTGGGCGGATATCT CGGCCATCGCCA CGGA TGGCGAATGCCG TTCTACGTCTGCGCG Acid345_1834 2214429 - 2215685 + | major facilitator transporter Acid345_1835 2215682 - 2216869 + | glycosyl transferase family protein Acid345_1836 2217312 - 2216875 - | hypothetical protein TERM 1666 2217180 - 2217193 + g 90 -4.5 -5.42259 | CTTGCCGCTCCTCGC GAGGG TGGA CCTTC TTTTTTTCCGGATCG Acid345_1837 2217855 - 2217346 - | nucleic acid binding, OB-fold, tRNA/helicase-type TERM 1667 2217830 - 2217807 - G 75 -10.3 -3.64703 | overlap 2217790 2217825 CGGCGCGCAGGCAAA TGGCGCTGC CGAAGC ACAGCGCCA CGCACAACAGGGCCC Acid345_1838 2218121 - 2217855 - | hypothetical protein Acid345_1839 2218379 - 2218140 - | alkylhydroperoxidase AhpD Acid345_1840 2218511 - 2218840 + | hypothetical protein Acid345_1841 2219827 - 2218847 - | amidohydrolase 2 TERM 1668 2219458 - 2219441 - G 83 -5.5 -4.88067 | ATTCACGGAGAAAAA CCCAACC AGTC GCTTGGG ATACTTTGCCACTTC Acid345_1842 2220715 - 2219882 - | hypothetical protein Acid345_1843 2221240 - 2220746 - | thioredoxin-like Acid345_1844 2222213 - 2221545 - | hypothetical protein Acid345_1845 2222236 - 2222763 + | NADH-quinone oxidoreductase, chain I TERM 1669 2222790 - 2222818 + F 71 -9.6 -3.49884 | opp_overlap 2222789 2222783, overlap 2222793 2222796 2222810 TAAAGAATGGAAATC CTGCAACTCCGC CAAAA GCGGAGTTGTAC TCTTTGCTGCTGTCT TERM 1670 2222793 - 2222815 + F 81 -13.5 -2.88215 | opp_overlap 2222789 2222783, overlap 2222790 2222796 2222810 AGAATGGAAATCCTG CAACTCCGC CAAAA GCGGAGTTG TACTCTTTGCTGCTG Acid345_1846 2222842 - 2223852 + | hypothetical protein TERM 1671 2223882 - 2223902 + G 71 -8.2 -4.08485 | opp_overlap 2223882 2223881, overlap 2223877 GGATAATGTGGAAAT CCGGCTGC TCGAT GCAGCGGG TTTCGTTTGCATGGC Acid345_1847 2223872 - 2225095 + | methionine synthase (B12-dependent) TERM 1672 2225834 - 2225820 - g 72 -5.6 -4.44667 | opp_overlap 2225823, overlap 2225822 CGCGGCAACAACAAA GTTCGC GAG GCGATC CACTCCGCGTTTCTG Acid345_1848 2225085 - 2227814 + | methionine synthase (B12-dependent) TERM 1673 2227849 - 2227820 - T 95 -9.9 -4.82901 | opp_overlap 2227822, overlap 2227822 TCGCGCCTAGAAAAA GGGAAGCCCGCTC CGAA GAGCCGGCTCCTC ACTTCCAGAACAGTT Acid345_1849 2229244 - 2227865 - | peptidase M20 TERM 1674 2229287 - 2229270 - R 71 -10.5 -3.16071 | overlap 2229268 2229266 CCTTATATGAATACA CGCGGGC CAGA GCCCGCA ACCAAACTTCCAAGT Acid345_1850 2229718 - 2229377 - | hypothetical protein Acid345_1851 2230088 - 2229849 - | hypothetical protein Acid345_1852 2230237 - 2230938 + | Pirin-like TERM 1675 2230992 - 2230970 - f 93 -9.2 -4.69053 | opp_overlap 2230970, overlap 2230965 CACGATGTAATAAAA TGCCTTCC TGCAAGG GGAAGGCA TTTTTCTTTTGCGCT TERM 1676 2230970 - 2230992 + F 100 -9.9 -5.46706 | opp_overlap 2230970 2230965 CACGATGTAATAAAA TGCCTTCCT GCAAG GGGAAGGCA TTTTTCTTTTGCGCT Acid345_1853 2231096 - 2231542 + | hypothetical protein Acid345_1854 2231590 - 2232084 + | thioesterase superfamily protein Acid345_1855 2232118 - 2232612 + | hypothetical protein Acid345_1856 2232682 - 2233680 + | pyridoxine biosynthesis protein TERM 1677 2233720 - 2233750 + T 90 -12.7 -3.78329 | opp_overlap 2233725, overlap 2233725 TGTCCCGCCAAAACG CAAAAGGCGCAGA TACGC TCTGCGCCTTTTC TTTCGCTTAGTCCCA TERM 1678 2233745 - 2233725 - T 100 -12.6 -4.4267 | opp_overlap 2233720 2233725 CGCCAAAACGCAAAA GGCGCAGA TACGC TCTGCGCC TTTTCTTTCGCTTAG TERM 1679 2233725 - 2233745 + T 100 -12.6 -4.94058 | opp_overlap 2233725, overlap 2233720 CGCCAAAACGCAAAA GGCGCAGA TACGC TCTGCGCC TTTTCTTTCGCTTAG Acid345_1857 2234448 - 2233786 - | hypothetical protein Acid345_1858 2235526 - 2234570 - | hypothetical protein TERM 1680 2234878 - 2234866 - G 85 -3.3 -5.36441 | overlap 2234867 2234868 TCTCGAGAGAAAAAA TCTCG CAA CGCGA CCCAAGTGCAGCGCA Acid345_1859 2235625 - 2236776 + | putative esterase Acid345_1860 2237286 - 2236762 - | signal peptidase II Acid345_1861 2240114 - 2237304 - | isoleucyl-tRNA synthetase TERM 1681 2238811 - 2238835 + g 70 -12.1 -2.77791 | overlap 2238807 2238815 TTGATTTCGTCGAGG GCGACGGAACG AAG CGTGCCGTTGC TCATCTTGGCTTCCA Acid345_1862 2240555 - 2241553 + | TonB-like protein TERM 1682 2241640 - 2241665 + F 91 -11.9 -4.08349 | opp_overlap 2241638 AGCGGACTGAAACTG CGGGAGAGG ACAACCAG CCTCTCCCG TTCTGTTTTTGCGCT TERM 1683 2242911 - 2242933 + G 73 -11.2 -3.34398 | overlap 2242909 CGTCACTATCAGCTA TGCTTCCGGC AAT GCCGGTGGCA TCTTTGGCCCAGCGC Acid345_1863 2241937 - 2243646 + | Cl- channel, voltage gated Acid345_1864 2244120 - 2243821 - | hypothetical protein Acid345_1865 2244228 - 2244443 + | hypothetical protein TERM 1684 2244573 - 2244587 + G 71 -10 -3.55563 | AGCGGATGGGCTTGT GCTCAG GTG CTGAGC TTTCCCGCGTCCAAT Acid345_1866 2244516 - 2246402 + | von Willebrand factor, type A Acid345_1867 2248094 - 2246868 - | ABC transporter, ATPase subunit TERM 1685 2247708 - 2247728 + g 79 -12.5 -3.23395 | ATCAGCCAGACCCAC GCGCTCCAG CGC CTGGCGCGC TTCCTGCTCGTCGGT Acid345_1868 2249207 - 2248095 - | ABC efflux pump, inner membrane subunit Acid345_1869 2250463 - 2249207 - | ABC efflux pump, inner membrane subunit TERM 1686 2249771 - 2249798 + g 70 -4 -4.56775 | overlap 2249774 GGCAAAATCGTCTTC CGGCTTGGTCAG CGCA CTGACCTGGATG TTTTTCACGACCCCT TERM 1687 2249837 - 2249861 + g 72 -9.3 -3.65812 | overlap 2249840 CAGTACAGCCTGCGC CAAGGTCATCG GCG CGATGATCTGG TTATCTTCCGCCCCG TERM 1688 2250191 - 2250205 + g 86 -8.6 -4.57073 | CCAGAAGATGCCCTT GATCTC GGG GAGATC TTTTTCGGCGAGATA Acid345_1870 2251720 - 2250467 - | iron permease FTR1 TERM 1689 2251741 - 2251771 + H 70 -10 -3.31726 | opp_overlap 2251746, overlap 2251742 2251746 2251746 GTGGACCCGCTTTCG GTAAATGAAAATGA ATT TCATTTTCATTTAA TATTATATGGCGCGC TERM 1690 2251742 - 2251770 + H 78 -13.5 -2.58822 | opp_overlap 2251746, overlap 2251741 2251746 2251746 TGGACCCGCTTTCGG TAAATGAAAATGA ATT TCATTTTCATTTA ATATTATATGGCGCG TERM 1691 2251766 - 2251746 - H 71 -9.9 -3.53012 | opp_overlap 2251742 2251741 2251746 2251746 CCCGCTTTCGGTAAA TGAAAATGA ATT TCATTTTCA TTTAATATTATATGG TERM 1692 2251746 - 2251766 + H 80 -9.9 -3.99275 | opp_overlap 2251746, overlap 2251742 2251741 2251746 CCCGCTTTCGGTAAA TGAAAATGA ATT TCATTTTCA TTTAATATTATATGG Acid345_1871 2251929 - 2252507 + | glutamine amidotransferase subunit PdxT Acid345_1872 2252507 - 2252986 + | glutathione peroxidase Acid345_1873 2253522 - 2252983 - | hypothetical protein TERM 1693 2253970 - 2253982 + G 78 -9.1 -4.1347 | GAAAAGATCTTCGAG CGTGC GCC GCACG TTTCTCTGGTTGCGG Acid345_1874 2253682 - 2255016 + | tRNA-i(6)A37 modification enzyme MiaB Acid345_1875 2255041 - 2255526 + | hypothetical protein TERM 1694 2255663 - 2255674 + G 75 -5.8 -4.57073 | CGCTCTAGGCATAGC CTGG ATCA CCAG TTTTTGGAACGGCTC Acid345_1876 2255607 - 2255861 + | hypothetical protein TERM 1695 2256167 - 2256192 + G 72 -6.1 -4.29845 | opp_overlap 2256169, overlap 2256170 GCTCACCGGTCACAC CATGGCGTTCA CGTT TGAAGGCCTTG TTTTCGGTTCGGTTC TERM 1696 2256170 - 2256189 + G 72 -6.4 -4.25859 | opp_overlap 2256169, overlap 2256167 CACCGGTCACACCAT GGCGTTCA CGTT TGAAGGCC TTGTTTTCGGTTCGG Acid345_1877 2255922 - 2256596 + | molybdate ABC transporter inner membrane protein Acid345_1878 2256593 - 2257666 + | molybdate ABC transporter ATPase TERM 1697 2257707 - 2257687 - T 71 -6.2 -4.2528 | gap 1 GTCGAAGCCAACAAA GACC-GGTT CCGG AACCAGGTC CAAGCCAAAACGCGT Acid345_1879 2258730 - 2257663 - | UDP-N-acetylmuramate dehydrogenase Acid345_1880 2258812 - 2259249 + | hypothetical protein Acid345_1881 2260347 - 2259250 - | rhomboid-like protein TERM 1698 2260168 - 2260135 - G 72 -4.8 -4.60487 | overlap 2260138 CACCATCGCTAAAAA CAC-CGCCACATTGAT TCCG ATCAATATG-CGAGTG ACGATCGGCGCGGGC TERM 1699 2260245 - 2260263 + g 75 -12.4 -3.22491 | overlap 2260250 GCACTTGTGGAGGCG GCTGCTGC GGG GCGGCAGC TTGCTGCTCGCATTT Acid345_1882 2261500 - 2260349 - | YVTN beta-propeller repeat-containing protein Acid345_1883 2262564 - 2261497 - | 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase Acid345_1884 2262878 - 2263378 + | hypothetical protein TERM 1700 2263394 - 2263422 + T 91 -14.6 -3.04715 | overlap 2263399 GCGATTTCGTTTTTC CGGAACGCCCGC CGCGC GCGGGCGTTTTG CTTTTAGCGAAGATC TERM 1701 2263399 - 2263417 + T 100 -13.1 -4.67038 | overlap 2263394 TTCGTTTTTCCGGAA CGCCCGC CGCGC GCGGGCG TTTTGCTTTTAGCGA Acid345_1885 2263845 - 2263426 - | hypothetical protein Acid345_1886 2264296 - 2263835 - | hypothetical protein Acid345_1887 2265102 - 2264314 - | hypothetical protein Acid345_1888 2265885 - 2265121 - | hypothetical protein Acid345_1889 2266075 - 2267055 + | hypothetical protein Acid345_1890 2269707 - 2267056 - | ABC efflux pump, inner membrane subunit TERM 1702 2267142 - 2267117 - G 83 -11.9 -3.90744 | gap 1 CGCGCCGGCAAATAA CTCGCGACCAGC GCT GCCG-TCGCGAG CAGCACCGCTACGCC TERM 1703 2269586 - 2269601 + g 75 -10.4 -3.7108 | GGCGACATTCCTGCG CGGACG TTGT CGTCCG TTTGCATCTCGACGT Acid345_1891 2270108 - 2269704 - | PadR family transcriptional regulator Acid345_1892 2270580 - 2271293 + | hypothetical protein TERM 1704 2271321 - 2271345 + F 100 -15.7 -4.14739 | AAAGTCCCATGCACA GGGCGACGGCT GCG GGCTGTCGCCC TTTTGCGATGCCTAA TERM 1705 2272369 - 2272354 - g 71 -8.2 -4.07568 | CGCTGCGGGCCAAAA CCGCCG CCGC CGACGG TTACGCCACCGGTTC Acid345_1893 2271378 - 2272625 + | hypothetical protein TERM 1706 2272664 - 2272646 - f 71 -10.2 -3.17051 | opp_overlap 2272646, overlap 2272644 GCCGCACTAGCAACA GCTTCCGG CTG CCGGACGC TTTCACATCCGCGAA TERM 1707 2272646 - 2272664 + F 74 -10.2 -3.59979 | opp_overlap 2272646 2272644 GCCGCACTAGCAACA GCTTCCGG CTG CCGGACGC TTTCACATCCGCGAA Acid345_1894 2273080 - 2273280 + | cold-shock DNA-binding protein family protein TERM 1708 2273302 - 2273338 + T 71 -4.4 -4.60487 | gap 1, opp_overlap 2273309, overlap 2273304 2273309 CGTTCGAACCTAGTA CTGAATAGCAGCCGCGA GCAA TC-CGGCTGCTTTTCCC TTTTTACGCATCCTC TERM 1709 2273309 - 2273331 + T 88 -9.9 -4.4874 | gap 1, opp_overlap 2273309, overlap 2273304 2273302 ACCTAGTACTGAATA GCAGCCGCGA GCAA TC-CGGCTGC TTTTCCCTTTTTACG Acid345_1895 2273701 - 2273342 - | hypothetical protein Acid345_1896 2274214 - 2273759 - | hypothetical protein Acid345_1897 2274454 - 2275539 + | hypothetical protein TERM 1710 2275563 - 2275602 + F 100 -15.1 -3.9398 | opp_overlap 2275565, overlap 2275565 CACCGAATAGTCGCA AAGCGGAGCCGGACA GGATCGGAGG TGTCCGGCTCCGCTG TTTCTAAGGTTCTAA TERM 1711 2275565 - 2275600 + F 100 -17.7 -3.55592 | opp_overlap 2275565, overlap 2275563 CCGAATAGTCGCAAA GCGGAGCCGGACA GGATCGGAGG TGTCCGGCTCCGC TGTTTCTAAGGTTCT TERM 1712 2275600 - 2275565 - f 100 -17.7 -3.6106 | opp_overlap 2275565 2275563 CCGAATAGTCGCAAA GCGGAGCCGGACA GGATCGGAGG TGTCCGGCTCCGC TGTTTCTAAGGTTCT Acid345_1898 2276280 - 2279531 + | glycosyl hydrolase TERM 1713 2279576 - 2279553 - f 95 -15.2 -3.29385 | opp_overlap 2279553, overlap 2279566 AAAGCTAACCACGAA CGCCGGGGGC AAAC GCCTCCGGCG TTTTATTTTTCACGA TERM 1714 2279553 - 2279576 + F 100 -17.4 -5.26119 | opp_overlap 2279553 2279566 AAAGCTAACCACGAA CGCCGGGGGC AAAC GCCTCCGGCG TTTTATTTTTCACGA Acid345_1899 2279703 - 2281388 + | hypothetical protein Acid345_1900 2283506 - 2281389 - | peptidase S15 Acid345_1901 2284195 - 2283566 - | beta-lactamase-like TERM 1715 2284345 - 2284318 - R 100 -15.7 -5.47821 | opp_overlap 2284322 ATTTATCGAAAAAAA TGAAGGCCTCC GCATGA GGAGGCCTTCA TCCAAAATCCAAAAA Acid345_1902 2284660 - 2284361 - | protein translocase subunit secG Acid345_1903 2284969 - 2285817 + | 2-hydroxy-3-oxopropionate reductase TERM 1716 2286864 - 2286852 - g 72 -4.8 -4.58663 | ACGACGTGGGAAAAA TCGG CGTTC CCGA AACCATCTTGCTGAA Acid345_1904 2286197 - 2287291 + | response regulator receiver modulated metal dependent phosphohydrolase Acid345_1905 2288688 - 2287588 - | lipolytic enzyme, G-D-S-L TERM 1717 2287731 - 2287741 + g 71 -6.8 -4.19238 | CCGCGGAACGAACGC GGTC GGC GACC TTTTGGACTTCGGCG Acid345_1906 2288869 - 2289246 + | hypothetical protein Acid345_1907 2289954 - 2289250 - | hypothetical protein Acid345_1908 2290109 - 2293015 + | fibronectin, type III TERM 1718 2293028 - 2293068 + F 78 -6.8 -4.56597 | opp_overlap 2293028 2293020 TAGGTAACGAGAAAA TCCCCACCCTGACTTG AGTGTTTGA CGGGTCTCGGTGGGGA TTTTTGCGCCGAGAG Acid345_1909 2293371 - 2295257 + | hypothetical protein TERM 1719 2296103 - 2296116 + G 71 -8.1 -4.07246 | CTTTACCAGTGGCAC GGCTG GCGG CAGCC TTTACTTTGCGATCA Acid345_1910 2295324 - 2297267 + | hypothetical protein TERM 1720 2297288 - 2297307 + F 100 -15 -5.28942 | CTTGCAGCCAACCGG GGGGCGGA GAAA TCCGCCCC TTTTTCTTTGCGCTG Acid345_1911 2297406 - 2298017 + | carbonic anhydrase Acid345_1912 2298499 - 2298014 - | tRNA/rRNA methyltransferase (SpoU) TERM 1721 2298325 - 2298339 + g 79 -7 -4.63184 | overlap 2298336 ACGGGACAGTTTCTT CCGCGC CCA GAGCGG TTTTTGAGATCGCTT TERM 1722 2298336 - 2298352 + g 80 -5.1 -5.0133 | overlap 2298325 TCTTCCGCGCCCAGA GCGGTTT TTG AGATCGC TTTTTTCGGCGGATG Acid345_1913 2299671 - 2298499 - | cystathionine gamma-synthase TERM 1723 2299685 - 2299710 + r 71 -11.1 -2.85668 | opp_overlap 2299685 ATTCTAAAAGAACAA GGACCACAGCG TGCG TGCCGTGGTCC TGTGGTCTCGCCATG TERM 1724 2299710 - 2299685 - R 95 -12.6 -4.21471 | opp_overlap 2299685 ATTCTAAAAGAACAA GGACCACAGC GTGCGT GCCGTGGTCC TGTGGTCTCGCCATG Acid345_1914 2301969 - 2299789 - | hypothetical protein TERM 1725 2300180 - 2300140 - G 71 -10.3 -3.54543 | opp_overlap 2300169 ATTGAGCGCTTCAAA CCACTCGGGCAGACGTACC ACG GCCACGCCCGCCCCATTGG TGGTGATGTTGCCAG Acid345_1915 2302786 - 2302124 - | hypothetical protein Acid345_1916 2303865 - 2302939 - | MscS mechanosensitive ion channel Acid345_1917 2303953 - 2304300 + | hypothetical protein TERM 1726 2304331 - 2304359 + T 100 -13.9 -4.67353 | opp_overlap 2304334, overlap 2304334 GGAACCGACCAATGA AAAGCGCCATCCG TTT TGGATGGCGCTTC TTTTTGCCTGAGTGA TERM 1727 2304334 - 2304356 + T 100 -15.6 -4.44608 | opp_overlap 2304334, overlap 2304331 ACCGACCAATGAAAA GCGCCATCCG TTT TGGATGGCGC TTCTTTTTGCCTGAG TERM 1728 2304356 - 2304334 - T 100 -14.9 -4.45945 | opp_overlap 2304331 2304334 ACCGACCAATGAAAA GCGCCATCC GTTTT GGATGGCGC TTCTTTTTGCCTGAG hppA 2306879 - 2304378 - | membrane-bound proton-translocating pyrophosphatase TERM 1729 2304864 - 2304881 + g 70 -4.1 -4.68424 | gap 1, overlap 2304857 GGCCACGACCTTCTT GCTGTCCG CAA CGGA-GGC TTTTTCGATGCCTTC TERM 1730 2307074 - 2307060 - H 71 -6.4 -4.25104 | CGGCTCTGACCAAAA TCGGAA TTT TCCCGA ACCCGGGAACCCTGC Acid345_1919 2307286 - 2308140 + | hypothetical protein Acid345_1920 2309575 - 2308682 - | hypothetical protein TERM 1731 2309023 - 2308986 - G 75 -4.1 -4.83169 | gap 1, overlap 2308972 2308988 AGGCCGTCAGAAAAA CGTC-CCGCCCCGTTG CCGAGTT CAACAGTGCGGAGAGG ATTTCCGGCGGTGTC TERM 1732 2310449 - 2310428 - g 71 -11.5 -3.25823 | opp_overlap 2310425 TGGTTTCGACAGCAA CCGTGGCCG CTAT CGGCAACGG GTCGTCGTTCCGCAA Acid345_1921 2309746 - 2310777 + | transposase IS116/IS110/IS902 Acid345_1922 2312780 - 2313229 + | DoxX TERM 1733 2313261 - 2313279 + T 75 -6.7 -4.41047 | ACTTGCCGTCAACAG GCTCATC GTAAG GATGGGC TTTTCATTCGCAAGT Acid345_1923 2314352 - 2313468 - | hypothetical protein TERM 1734 2313782 - 2313765 - G 74 -7.7 -4.23794 | gap 1 GTAACGGAACACAAA GGCATCCG TGG CGG-TGCC GTACTCGCCAATCAC Acid345_1924 2315042 - 2314512 - | hypothetical protein Acid345_1925 2315589 - 2315194 - | hypothetical protein TERM 1735 2315725 - 2315696 - R 95 -10.8 -4.55295 | gap 1, overlap 2315697 2315700 TTCGTCACAAAGAAA TCG-AGCCGGAAG GAAAG CTTCCGGCCGCGA TGGGAATTCAGTTTT TERM 1736 2315722 - 2315697 - R 75 -11.2 -3.32695 | gap 1, overlap 2315696 2315700 TCGTCACAAAGAAAT CGAGCCGGAAG GAAAG CTTCCGGC-CG CGATGGGAATTCAGT TERM 1737 2315720 - 2315700 - R 76 -12.6 -2.82776 | overlap 2315697 2315696 TCACAAAGAAATCGA GCCGGAAG GAAAG CTTCCGGC CGCGATGGGAATTCA Acid345_1926 2316163 - 2315756 - | hypothetical protein Acid345_1927 2318759 - 2316309 - | hypothetical protein TERM 1738 2316884 - 2316907 + g 75 -5.2 -4.63218 | gap 1 GGATGTTCGAAGGCG CGGCGTCAGCT TCC GGCTG-CACCG TTTTGTTCGCGAGCG TERM 1739 2318350 - 2318319 - G 76 -12.2 -3.34344 | CGAGGCGCGAACGAA TGCGCCGGGGCGTC CGCG GACGGCGCGACGCA GGGTGCTGAAGCCGC TERM 1740 2318911 - 2318882 - R 74 -10 -3.65314 | opp_overlap 2318898, overlap 2318885 GCGAAGGGTTAAGAA GAATGAGCGACC GGCCGG GGCCGCCCACTC CGTTGGAAGCAACTA TERM 1741 2318908 - 2318885 - R 74 -8.1 -3.95725 | opp_overlap 2318898, overlap 2318882 AAGGGTTAAGAAGAA TGAGCGACC GGCCGG GGCCGCCCA CTCCGTTGGAAGCAA Acid345_1928 2319196 - 2318924 - | hypothetical protein Acid345_1929 2319752 - 2319240 - | YbaK/prolyl-tRNA synthetase associated region TERM 1742 2319848 - 2319805 - H 79 -11.6 -3.68036 | overlap 2319803 AACGACGTGAAAAGA TCGGTCGCTCCGCACGGAGG AGGG CCTCGGCGTGGATCGACTGA GATGAATATGAGGCT TERM 1743 2321776 - 2321748 - g 70 -3.8 -4.62069 | overlap 2321751 CGGGCAGGGCAAAAA TGATCCCCGC GTAAACGTG GCGGAGAGCA ATCAGATCGTGGCCG Acid345_1930 2320039 - 2321979 + | peptidase S9, prolyl oligopeptidase Acid345_1931 2322056 - 2322520 + | (2Fe-2S)-binding protein TERM 1744 2323956 - 2323969 + G 70 -2.4 -4.7373 | ACCCTATGAGTCCCG CGAT AAGTCC ATCG TTTTTCATCCGGTGA TERM 1745 2324562 - 2324572 + G 71 -6.8 -4.18018 | overlap 2324556 GCTCGCACCGGCAAT TGGC AAT GCCA TTTTCGCTGCGACCG Acid345_1932 2322517 - 2324664 + | isoquinoline 1-oxidoreductase Acid345_1933 2324728 - 2327145 + | ABC efflux pump, inner membrane subunit Acid345_1934 2327961 - 2327164 - | response regulator receiver protein Acid345_1935 2329045 - 2328032 - | UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase TERM 1746 2328836 - 2328885 + g 75 -10.8 -3.65812 | gap 3 GCTGCGGACGAGCGG CGCGCGACCGGCGGTGA-AGTCGTC GGA GACGATGATCGC-GCCGG-CGTGCG TTGTCTTCGCGGCCG Acid345_1936 2330364 - 2329897 - | hypothetical protein TERM 1747 2329930 - 2329947 + g 79 -6.9 -4.59853 | TTCTTGCGCGGTTGC GTCCGGC TTGC GCCGCAC TTTTTCCCCGATTAC TERM 1748 2330409 - 2330425 + H 70 -6.5 -4.10007 | TTGCGGTACTCCGCC GGTTCGA TTT TCGCACC TTTTGCGCGCCTTAT TERM 1749 2330594 - 2330584 - H 81 -6.8 -4.68384 | overlap 2330590 AGGGAGCCAATAAAA GGGA AAT TCCC CGACGGAACCGAGTG TERM 1750 2332235 - 2332208 - g 88 -11.3 -4.2528 | gap 1 CCGGAAGTGAAGAAA GCGCCAGAGGCC AAAAA GGCCCCTG-CGC CCGAGCCAAAGAAAA Acid345_1937 2330675 - 2332378 + | polynucleotide adenylyltransferase TERM 1751 2332391 - 2332426 + F 95 -14.8 -3.66139 | opp_overlap 2332391 2332399, overlap 2332399 TAACGTAGCGACAAG CGAAAAAAGGCGTGCT TACG AGCACGCCTTTCGTCG TTTGCGGTGTCTATA TERM 1752 2332426 - 2332391 - f 90 -17 -2.62389 | opp_overlap 2332391 2332399, overlap 2332399 TAACGTAGCGACAAG CGAAAAAAGGCGTGCT TACG AGCACGCCTTTCGTCG TTTGCGGTGTCTATA TERM 1753 2332418 - 2332399 - f 100 -13.6 -5.1925 | opp_overlap 2332391 2332399, overlap 2332391 CGACAAGCGAAAAAA GGCGTGCT TACG AGCACGCC TTTCGTCGTTTGCGG TERM 1754 2332399 - 2332418 + F 93 -13.6 -3.8901 | opp_overlap 2332399 2332391, overlap 2332391 CGACAAGCGAAAAAA GGCGTGCT TACG AGCACGCC TTTCGTCGTTTGCGG Acid345_1938 2332464 - 2333063 + | hypothetical protein Acid345_1939 2334167 - 2333070 - | peptidyl-arginine deiminase Acid345_1940 2334823 - 2334167 - | hypothetical protein Acid345_1941 2335747 - 2334836 - | Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase Acid345_1942 2336021 - 2337094 + | deoxyhypusine synthase TERM 1755 2337118 - 2337139 + F 78 -6.5 -4.64334 | GACACAGAATGACGA CGCCTGGCA AATA TGTCAGCCG TTTTGTTCACCGATT Acid345_1943 2337209 - 2337964 + | abortive infection protein TERM 1756 2338003 - 2337982 - T 100 -10.1 -4.90381 | opp_overlap 2337984, overlap 2337984 GGCAAGACAAGAAAA GAGGCGCGA TCTC TCGCGCCTT TCATCACTTCGATAC TERM 1757 2337984 - 2338001 + T 90 -12.7 -3.79668 | opp_overlap 2337982 2337984 CAAGACAAGAAAAGA GGCGCGA TCTC TCGCGCC TTTCATCACTTCGAT TERM 1758 2338001 - 2337984 - T 93 -12.7 -4.06203 | opp_overlap 2337984, overlap 2337982 CAAGACAAGAAAAGA GGCGCGA TCTC TCGCGCC TTTCATCACTTCGAT Acid345_1944 2338584 - 2338027 - | pyruvoyl-dependent arginine decarboxylase TERM 1759 2338390 - 2338380 - G 72 -4.6 -4.6902 | overlap 2338383 2338384 CCACAACGGCAAAAA CGAC CTC GCCG GGGCTGAGATACTTC TERM 1760 2338642 - 2338624 - R 82 -5.2 -5.01858 | overlap 2338633 2338635 GAAACAAAAAAATAA CACAGTGA ATA TCGCCGTG CGTCATTTGACAAAA Acid345_1945 2339585 - 2338683 - | LysR family transcriptional regulator Acid345_1946 2339745 - 2340800 + | zinc-binding alcohol dehydrogenase TERM 1761 2340820 - 2340840 + T 100 -15.4 -4.66537 | opp_overlap 2340818 2340815 TGCAGAAGAATGACG GGCGCGGC ACGGA GCCGCGCC TTTTCTATTGCGCGA Acid345_1947 2341327 - 2340845 - | hypothetical protein TERM 1762 2341024 - 2341034 + g 70 -2.4 -4.72029 | overlap 2341019 CCAGGAATTGGCCGG AGCC GTC GGCG TTTTCTTGCATTACG Acid345_1948 2342026 - 2341427 - | hypothetical protein Acid345_1949 2342281 - 2342967 + | ArsR family transcriptional regulator Acid345_1950 2343181 - 2344626 + | isocitrate dehydrogenase (NADP) Acid345_1951 2344680 - 2345606 + | malate dehydrogenase (NAD) TERM 1763 2345647 - 2345630 - f 93 -12.7 -4.03978 | opp_overlap 2345630 AACGTGTGAGACAAA GCCGCTC TTCG GAGCGGC TTTTGTCATACAGTC TERM 1764 2345630 - 2345647 + F 100 -12.7 -4.46926 | opp_overlap 2345630 AACGTGTGAGACAAA GCCGCTC TTCG GAGCGGC TTTTGTCATACAGTC Acid345_1952 2345750 - 2346325 + | isoprenylcysteine carboxyl methyltransferase Acid345_1953 2346582 - 2346322 - | hypothetical protein TERM 1765 2346481 - 2346504 + g 77 -2.2 -5.0538 | opp_overlap 2346486, overlap 2346483 GAAGAGCACTCCGTC CACAACCGCC ATCA GGAGGTAGAG TTTTTTGCGCTCGGG Acid345_1954 2347415 - 2346579 - | endonuclease III / DNA-(apurinic or apyrimidinic site) lyase Acid345_1955 2347506 - 2348321 + | putative heme peroxidase TERM 1766 2349265 - 2349249 - g 73 -11.5 -3.3785 | GGAACTCACGTATAA CGCCGAC TCC GCCGGCG ACGGCAAGTTCACCG TERM 1767 2349454 - 2349475 + G 84 -7.3 -4.72272 | gap 1 GATGGCTGGGTGGTT GTGGACGACT CCA AG-CGTCCGC TTTTTGATAGCGACA TERM 1768 2351603 - 2351583 - g 75 -9.7 -3.79906 | CGATCTCGATAAGAA GCGCGATGA GTA TCATCGCTC GGCGCAGGATGAGGA Acid345_1956 2348905 - 2351688 + | glycoside hydrolase family protein Acid345_1957 2352273 - 2351689 - | hypothetical protein TERM 1769 2351763 - 2351790 + g 100 -14.2 -4.13767 | opp_overlap 2351761 2351768, overlap 2351766 ACTCGATGAGAATTT CAAGACGCCGCT CTCG GGTGGCGTCTTG TTTTGCACTCACCAC TERM 1770 2351766 - 2351787 + g 82 -10.1 -4.19746 | opp_overlap 2351761 2351768, overlap 2351763 CGATGAGAATTTCAA GACGCCGCT CTCG GGTGGCGTC TTGTTTTGCACTCAC Acid345_1958 2352342 - 2352569 + | hypothetical protein TERM 1771 2352965 - 2352992 + G 75 -8.4 -3.99324 | gap 1 TGGTTATGTCGGTGG GCGTCCGCTGGTG AAC CGCTGG-GGACGC TTTATCCTGCTCAAC Acid345_1959 2352714 - 2353349 + | hypothetical protein TERM 1772 2353390 - 2353404 + T 72 -11.4 -3.06183 | GGGTCCTTCGACTTC GCGACC TTC GGTCGC TTCGCTCAGGATGAC TERM 1773 2353431 - 2353451 + T 86 -9.7 -4.35874 | opp_overlap 2353431 TGACAGAACTAGAAA GCCTCGC CGATAAC GCGAGGC TTTTCACTTCTATTC TERM 1774 2353451 - 2353431 - T 83 -9.7 -4.12397 | opp_overlap 2353431 TGACAGAACTAGAAA GCCTCGC CGATAAC GCGAGGC TTTTCACTTCTATTC Acid345_1960 2354432 - 2353476 - | diguanylate cyclase with PAS/PAC sensor Acid345_1961 2354752 - 2355117 + | hypothetical protein Acid345_1962 2355556 - 2355119 - | type IV pilus assembly PilZ TERM 1775 2357255 - 2357243 - g 78 -6.3 -4.56597 | CTGCCTGTGGAAAAA TGTTC CCC GAACA AACGAAGTATCTTGC Acid345_1963 2355616 - 2357424 + | TPR repeat-containing protein TERM 1776 2358377 - 2358399 + G 100 -14.2 -4.07568 | GAGCGACGTGGAGCA GTGGAACCAG CAA CTGGTTCCGC TTTTGAAGGCCCAGA Acid345_1964 2357421 - 2358419 + | hypothetical protein TERM 1777 2358446 - 2358419 - T 95 -14.2 -3.5362 | overlap 2358423 GAAGGCCCAGAAATA GAAAGAGCACGC CGCA GCGTGCCCTCTC CCTCGGGGGAATTCC TERM 1778 2358442 - 2358423 - T 93 -11.4 -4.40003 | overlap 2358419 GCCCAGAAATAGAAA GAGCACGC CGCA GCGTGCCC TCTCCCTCGGGGGAA Acid345_1965 2359550 - 2358465 - | hypothetical protein Acid345_1966 2359995 - 2359672 - | hypothetical protein TERM 1779 2359810 - 2359858 + g 74 -7.4 -4.28656 | gap 1 CGACAGGATTTGAAT GCACCT-GGGCCCATCGTGCGTG AACT CACCCGCCATGGGATTGAGGTGC TTTTCGATCTTCGCT Acid345_1967 2360271 - 2361833 + | 3-octaprenyl-4hydroxybenzoate decarboxylase Acid345_1968 2361867 - 2362166 + | nucleotidyltransferase Acid345_1969 2362156 - 2362515 + | hypothetical protein Acid345_1970 2362649 - 2363020 + | response regulator receiver protein TERM 1780 2363048 - 2363067 + T 88 -11.4 -4.18197 | opp_overlap 2363048 GAATTAGGTATTAGA GCCCTGGA GAAA TCCGGGGC TTTTGCATGGCGCCT Acid345_1971 2363893 - 2363081 - | aldo/keto reductase TERM 1781 2364606 - 2364624 + G 72 -8.8 -3.88787 | GGTGGCCCGGCAACG GCGGATTC GGC GAACCCGC TTTCTACGCCTATGC TERM 1782 2364633 - 2364674 + G 74 -12.9 -2.87881 | gap 1 AACCCGCTTTCTACG CCTATGCC-GCTCCGGTCCC GGG GGGCCTGGGGCAGGCGAAGG TATCTCCGGCGATTG Acid345_1972 2363948 - 2364844 + | hypothetical protein Acid345_1973 2365440 - 2364841 - | DNA replication and repair protein RecR Acid345_1974 2365755 - 2365450 - | hypothetical protein Acid345_1975 2367656 - 2365758 - | DNA polymerase III, subunits gamma and tau TERM 1783 2365794 - 2365805 + g 76 -4.4 -4.76041 | GATGACCGTCCGTAC TTCG GCGC CGAA TTTTTCCTGCATGTA TERM 1784 2366133 - 2366123 - G 74 -8.2 -4.1899 | CCAGTTCATTCAAAA CCGC GTC GCGG ATGGCGGGAATGTTG Acid345_1976 2367766 - 2369163 + | methyltransferase type 12 TERM 1785 2370769 - 2370797 + G 83 -12.4 -3.83026 | gap 1 CGGTGGTCATCGTTT GCCGCG-ACCGCG ATGC CGCGGTGCGCCGC TTTGGTATCACGCAG TERM 1786 2370866 - 2370880 + G 70 -4.2 -4.63486 | TTTCTTCAACGACGA TCGCCT TGA ACGCGA TTTTCTTGCGCGGGT TERM 1787 2371140 - 2371118 - g 73 -12 -3.03124 | GCTCATTGCCGAATA CGACCAGCGT CTG ACGATGGTCG GCCAATACGTTGACG Acid345_1977 2369160 - 2371712 + | metallophosphoesterase Acid345_1978 2371831 - 2372190 + | anti-sigma-factor antagonist Acid345_1979 2372289 - 2372705 + | deoxyuridine 5'-triphosphate nucleotidohydrolase (dut) Acid345_1980 2373989 - 2372766 - | cystathionine beta-lyase Acid345_1981 2374609 - 2375811 + | cystathionine gamma-synthase TERM 1788 2376091 - 2376105 + G 72 -5.6 -4.41616 | CGACAGCGATCTCTA CGGCGG AAC CTGTCG TTTGTTTACCAAAGT Acid345_1982 2375798 - 2376967 + | cystathionine beta-lyase TERM 1789 2376966 - 2376987 + T 100 -12.3 -4.62471 | CGGCAAGTACGCGGT GAGCAGGGC TGAA GCCCTGTTC TTTTTAGCCCTTCAG TERM 1790 2377004 - 2377023 + T 100 -15 -4.28774 | TTTTAGCCCTTCAGC GGCCCGAC TAAA GTCGGGCC TTTTCACTTCAGTCG Acid345_1983 2377955 - 2377032 - | hypothetical protein TERM 1791 2377555 - 2377585 + g 71 -11.8 -2.88544 | GTGATGAAGAGAGTG CCGACCGTCAGCTT CGA AGGCTGTGGGTCGG TGTCTGCAAATAGAG TERM 1792 2377813 - 2377839 + g 74 -11.5 -3.54459 | opp_overlap 2377800, overlap 2377814 ACCGCCAGCCAGCCA TCGGGCGCGGA CAACT TCTGCGCCCGC TTTGCGCGCCATTGC TERM 1793 2377814 - 2377838 + g 83 -15 -2.72461 | opp_overlap 2377800, overlap 2377813 CCGCCAGCCAGCCAT CGGGCGCGGA CAACT TCTGCGCCCG CTTTGCGCGCCATTG Acid345_1984 2379424 - 2378030 - | YVTN beta-propeller repeat-containing protein Acid345_1985 2379795 - 2379409 - | hypothetical protein Acid345_1986 2380519 - 2380061 - | tRNA-adenosine deaminase Acid345_1987 2381345 - 2380524 - | hypothetical protein Acid345_1988 2382984 - 2381467 - | ABC peptide transporter, periplasmic ligand binding protein TERM 1794 2381941 - 2381962 + g 78 -2.9 -5.16841 | overlap 2381949 GGTGGATGTTTTCAT CGCCAATTG AAAA CGGTTGCCG TTTTTCTTCATATAG anmK 2384119 - 2382977 - | anhydro-N-acetylmuramic acid kinase Acid345_1990 2385234 - 2384116 - | Beta-N-acetylhexosaminidase TERM 1795 2385313 - 2385339 + H 85 -13.1 -3.53012 | opp_overlap 2385312 2385311, overlap 2385315 GTGGTATACAACAGG TGCGCTGGTTC GTGGG GAACCAGCGTA TTTCACCGGAACGCA TERM 1796 2385315 - 2385337 + H 88 -13.5 -3.34398 | opp_overlap 2385312 2385311, overlap 2385313 GGTATACAACAGGTG CGCTGGTTC GTGGG GAACCAGCG TATTTCACCGGAACG TERM 1797 2387380 - 2387424 + G 86 -15.7 -2.70932 | overlap 2387381 2387383 GACGAGCAGTGGGAA GCGGGCGTCTCCGTGCCGTTT CGC AAATGGCGCGGCGATGTCAGC TACTTCCAAACCAAA Acid345_1991 2385727 - 2387976 + | TonB-dependent receptor Acid345_1992 2388424 - 2388978 + | hypothetical protein TERM 1798 2388990 - 2389002 + T 74 -7.7 -4.21098 | overlap 2388997 2388998 ATAATCGCCTGTCTT TTCGC TGA GCGAA TTTTCGCGTTCGTGT TERM 1799 2389041 - 2389055 + T 72 -11.4 -3.06183 | GGGTCCTTCGACTCC GCGTGC TTC GCACGC TTCGCTCAGGATGAC Acid345_1993 2389858 - 2389076 - | exodeoxyribonuclease III (xth) Acid345_1994 2389959 - 2390225 + | SSU ribosomal protein S15P TERM 1800 2390307 - 2390272 - f 71 -11.1 -2.93853 | opp_overlap 2390272, overlap 2390271 2390274 GCGTTCGAACCAAAT CACCCGCTCTGTGAC CCGTGT GTCTGAGAGCGGGCG TTGCTGTTGGGCTAT TERM 1801 2391359 - 2391349 - g 74 -2.4 -4.99947 | opp_overlap 2391353 GGTAACGAAAGAAAA GCGG CGT CCGG ATGGGCGTGCGTTCG Acid345_1995 2390402 - 2392849 + | polynucleotide phosphorylase/polyadenylase TERM 1802 2392874 - 2392903 + T 74 -11.5 -3.22906 | opp_overlap 2392879, overlap 2392879 TAGCAAAACAGAAGT TGAAAGCCACGTC TTCG GGCGTGGCTTTTG CTTTTCTGGGAGTGC TERM 1803 2392879 - 2392898 + T 100 -11.4 -4.73108 | opp_overlap 2392879, overlap 2392874 AAACAGAAGTTGAAA GCCACGTC TTCG GGCGTGGC TTTTGCTTTTCTGGG TERM 1804 2392898 - 2392879 - T 70 -9.2 -3.72485 | opp_overlap 2392879 2392874 AAACAGAAGTTGAAA GCCACGTC TTCG GGCGTGGC TTTTGCTTTTCTGGG smpB 2393559 - 2393032 - | SsrA-binding protein TERM 1805 2393187 - 2393197 + g 72 -4.6 -4.63486 | TCCGGGTGGGGATGA GGGT GTG GCCC TTTTGTTGGGAGGCT TERM 1806 2394086 - 2394076 - g 75 -5.4 -4.58395 | GCGACGCCGGAAAAA TGCA GGA TGCA CTCGCCGAGTTCCAG Acid345_1997 2393808 - 2396102 + | type II and III secretion system protein Acid345_1998 2396198 - 2396620 + | general secretion pathway protein G Acid345_1999 2396614 - 2397009 + | general secretion pathway protein G TERM 1807 2397057 - 2397041 - f 83 -12.3 -3.62478 | opp_overlap 2397041 TAAGTAATCGCTAAA TCCGCCT CAT AGGCGGA TTTTTGTTGCTCCAG TERM 1808 2397041 - 2397057 + F 100 -12.3 -5.1356 | opp_overlap 2397041 TAAGTAATCGCTAAA TCCGCCT CAT AGGCGGA TTTTTGTTGCTCCAG TERM 1809 2397612 - 2397591 - g 70 -2.2 -4.77157 | gap 1, opp_overlap 2397595, overlap 2397592 2397594 GGAAGCGATCAAAAA CCA-GCGCG GTGAG CGCGCGTTG CAAGACATGCTGGGA Acid345_2000 2397475 - 2398143 + | hypothetical protein Acid345_2001 2398155 - 2398718 + | hypothetical protein TERM 1810 2398748 - 2398738 - g 74 -6.8 -4.2679 | GAATTGTCATGAAAA TGCG CGG CGCA AAAGGTTTCACGTTG TERM 1811 2399229 - 2399256 + G 75 -9.2 -3.90856 | gap 1, overlap 2399220 TTCCCATTGACGCAG GCGTCGGTGT-CT GGC AGTACAACGACGC TTTACTTCAACGGTT Acid345_2002 2398731 - 2399924 + | hypothetical protein TERM 1812 2399980 - 2399970 - g 70 -2.4 -4.72007 | TCCGATCAAAACAAA GCGC GCT GAGC AGGGATTTGCGCTGA Acid345_2003 2399941 - 2402814 + | hypothetical protein TERM 1813 2402838 - 2402862 + F 100 -13.6 -5.00616 | overlap 2402839 AACCGGCTCCAGTTA TTGGCCAGGC TTCGC GCCTGGCCAG TTTTTTGAGCGGCCG TERM 1814 2402839 - 2402861 + F 95 -14.9 -3.60048 | overlap 2402838 ACCGGCTCCAGTTAT TGGCCAGGC TTCGC GCCTGGCCA GTTTTTTGAGCGGCC TERM 1815 2403912 - 2403926 + G 81 -4.2 -5.11937 | opp_overlap 2403902, overlap 2403914 AGCAAGCCGGTGGAG GACCGT CCC ACGGTG TTTTTTGAGATTATT TERM 1816 2403914 - 2403924 + G 71 -6.8 -4.17355 | opp_overlap 2403902, overlap 2403912 CAAGCCGGTGGAGGA CCGT CCC ACGG TGTTTTTTGAGATTA Acid345_2004 2402949 - 2404034 + | 4-hydroxyphenylpyruvate dioxygenase TERM 1817 2404054 - 2404078 + F 70 -7 -4.07885 | opp_overlap 2404052 2404047, overlap 2404051 2404056 2404057 TTAGATTACGAAGGT CACGCGGGCC TTTCC GGCCCGCATC TTTTCGGACAAAATA TERM 1818 2404056 - 2404076 + F 74 -9.6 -3.63744 | opp_overlap 2404052 2404047, overlap 2404051 2404054 2404057 AGATTACGAAGGTCA CGCGGGCC TTTCC GGCCCGCA TCTTTTCGGACAAAA TERM 1819 2404057 - 2404075 + F 76 -13.1 -2.78032 | opp_overlap 2404052 2404047, overlap 2404051 2404056 2404054 GATTACGAAGGTCAC GCGGGCC TTTCC GGCCCGC ATCTTTTCGGACAAA TERM 1820 2405378 - 2405349 - g 74 -11.5 -3.56837 | gap 1, overlap 2405341 CTCGAAACAGCACAA CTG-CAGCACGAGT ACT ACACGTGCTGGCAG GACCTAAAAAAACAC Acid345_2005 2404119 - 2405408 + | homogentisate 1,2-dioxygenase Acid345_2006 2405415 - 2406293 + | hypothetical protein Acid345_2007 2406299 - 2407588 + | fumarylacetoacetate hydrolase TERM 1821 2407925 - 2407905 - g 93 -13.3 -3.89938 | overlap 2407899 AGAAGGAAATCGAAA CGCTCACGC GGC GCATGAGCG AAATCGATCACGAGT TERM 1822 2408373 - 2408361 - g 79 -5.5 -4.85782 | TCGCGCAAAAAGAAA TGCGC CGG ACGCA GATCGTGAGCGCCTA Acid345_2008 2407604 - 2409529 + | ABC transporter, ATPase subunit Acid345_2009 2409601 - 2409948 + | hypothetical protein TERM 1823 2409975 - 2409945 - T 91 -11.9 -4.18018 | overlap 2409951 GGTCGTTACCCAAAA GTAAAAGCCCACC TTTGC GGCGGGCTCTCAC GAACATTCCTTTGAT TERM 1824 2409969 - 2409951 - T 95 -9.5 -4.68645 | overlap 2409945 TACCCAAAAGTAAAA GCCCACC TTTGC GGCGGGC TCTCACGAACATTCC Acid345_2010 2410668 - 2409997 - | hypothetical protein Acid345_2011 2411344 - 2410766 - | NUDIX hydrolase Acid345_2012 2411964 - 2411380 - | hypothetical protein TERM 1825 2412410 - 2412397 - g 75 -5.9 -4.67353 | TTATCTATGGAAAAA GCCAC CTTT GCGGC CGGCTGTTTCTGGGG Acid345_2013 2412388 - 2412858 + | methionine sulfoxide reductase A TERM 1826 2412880 - 2412898 + T 95 -13.1 -4.20806 | opp_overlap 2412880 TTCTGTCATGAAAAA GCGGCGC TTCGT GCGCCGC TTTGCTTTTGCAATG TERM 1827 2412898 - 2412880 - T 100 -13.1 -4.72272 | opp_overlap 2412880 TTCTGTCATGAAAAA GCGGCGC TTCGT GCGCCGC TTTGCTTTTGCAATG Acid345_2014 2413575 - 2412919 - | hypothetical protein TERM 1828 2413356 - 2413368 + g 72 -9.1 -3.83205 | opp_overlap 2413338, overlap 2413338 CAGCGATAATCTCCT GCGAG TTA CTCGC TTTGGTCTGCGCGAT Acid345_2015 2414361 - 2413693 - | hypothetical protein Acid345_2016 2415954 - 2414440 - | rhomboid-like protein TERM 1829 2414547 - 2414563 + g 72 -9.4 -3.64703 | opp_overlap 2414559 TCGGCGAGTTGCCGG CCGCCT GATAA AGGCGG TTTGCATCGGCCGGG TERM 1830 2416191 - 2416203 + H 100 -4.7 -6.0427 | overlap 2416192 GTGTGCAGCGGGTTC TCCGG TGT CCGGC TTTTTTTTATCTAGT TERM 1831 2416192 - 2416202 + H 77 -8.2 -4.20122 | overlap 2416191 TGTGCAGCGGGTTCT CCGG TGT CCGG CTTTTTTTTATCTAG TERM 1832 2416464 - 2416446 - g 78 -8.8 -4.11216 | overlap 2416448 CTTTGACCTTGAAAA GATGGTGG ATA CCACCAAC CAGTGGATCCTCGAA TERM 1833 2416462 - 2416448 - g 75 -10 -3.65542 | overlap 2416446 TTGACCTTGAAAAGA TGGTGG ATA CCACCA ACCAGTGGATCCTCG Acid345_2017 2416363 - 2417364 + | 3-oxoacyl-[acyl-carrier-protein] synthase III TERM 1834 2417384 - 2417403 + T 89 -9.2 -4.67038 | TTCTGGAATATTTGA GGCCGCGA GCGA TGGCGGCC TTTTGCTTTTACAGG Acid345_2018 2418098 - 2417412 - | hypothetical protein Acid345_2019 2418666 - 2418124 - | hypothetical protein Acid345_2020 2419088 - 2418666 - | hypothetical protein TERM 1835 2418979 - 2419007 + g 90 -4.4 -5.40279 | TCTAGAGCATATTTC GCTTTGTCCGCC CCTGA GGCGGATTCGGC TTTTGTTTTGTTTTC Acid345_2021 2420365 - 2419085 - | TPR repeat-containing protein Acid345_2022 2423344 - 2420423 - | excinuclease ABC subunit A Acid345_2023 2424222 - 2423458 - | Heme/copper-type cytochrome/quinol oxidase subunit 3-like Acid345_2024 2425956 - 2424376 - | hypothetical protein TERM 1836 2425605 - 2425591 - G 83 -7.8 -4.57073 | CAGCGCTGCCAAAAA CATCGC CCA GCGACG CCCACCCAGCTCCCG Acid345_2025 2426905 - 2426000 - | Alpha/beta hydrolase Acid345_2026 2427543 - 2426920 - | adenylate cyclase Acid345_2027 2428814 - 2427819 - | trans-hexaprenyltranstransferase Acid345_2028 2429326 - 2428832 - | nucleotide-binding protein TERM 1837 2429361 - 2429350 - R 75 -5.8 -4.62336 | AGTGTACGGCAAAAA CGTG TAAA CACG AAGGCCACGAGGTTC Acid345_2029 2430239 - 2429436 - | TatD-related deoxyribonuclease Acid345_2030 2432524 - 2430509 - | methionyl-tRNA synthetase TERM 1838 2431890 - 2431861 - G 82 -10.7 -4.15061 | gap 1, overlap 2431864 CAATCCATACATAAA TCACGTGCGCCGGA TCG TCCGGCAC-CGGGA TGCCCCACTTGAACG Acid345_2031 2433905 - 2432517 - | hypothetical protein TERM 1839 2433857 - 2433819 - G 79 -13.9 -3.14132 | gap 1 GGTCTGTCGCAGCAA TTCCGCGGAGACCCCGGC ATCC ACCAGGG-CTCCGAGGAA CATATCCCCGCTGAT Acid345_2032 2434202 - 2436145 + | arginyl-tRNA synthetase Acid345_2033 2436264 - 2436476 + | hypothetical protein TERM 1840 2437345 - 2437360 + G 78 -6.1 -4.6645 | TCGCGCTTTCGTTCG TGCCG GAGTCG CGGCA TTTTCTCTGTCTCTC Acid345_2034 2436605 - 2437723 + | hypothetical protein Acid345_2035 2438752 - 2437727 - | serine phosphatase Acid345_2036 2439760 - 2438975 - | hypothetical protein Acid345_2037 2440792 - 2440196 - | hypothetical protein Acid345_2038 2441513 - 2440767 - | XRE family transcriptional regulator TERM 1841 2441390 - 2441378 - G 71 -10.5 -3.53444 | opp_overlap 2441380 CGAGGGGCTGCGAAA CGCCG AGA CGGCG CGCCAATTCGGATTG TERM 1842 2442066 - 2442082 + G 78 -8.7 -4.25104 | GCCTTCGGATGACGA TCTGCAG AAG CTGCGGA TTTTGATCAGCGAGA TERM 1843 2442822 - 2442840 + G 79 -7.4 -4.65895 | overlap 2442823 GAATTTGCTTTTGGG TCGATTGC GAA GCGATCGG TTTTTGGGTGGAGAG Acid345_2039 2441590 - 2443713 + | 5-oxoprolinase (ATP-hydrolyzing) TERM 1844 2443860 - 2443828 - T 100 -14.1 -5.46706 | overlap 2443829 ATTCCAAAACAAAAA CCCCCGCGCTATCGC TTC GCGATAGAACGGGGC ACCTATCTACAAACC TERM 1845 2443859 - 2443829 - T 100 -17.6 -3.86397 | overlap 2443828 TTCCAAAACAAAAAC CCCCGCGCTATCGC TTC GCGATAGAACGGGG CACCTATCTACAAAC Acid345_2040 2445611 - 2443875 - | peptidase M28 TERM 1846 2445777 - 2445756 - R 91 -10.1 -4.55697 | opp_overlap 2445755 2445753 2445758, overlap 2445758 AGCTGGAGAAAGAAA TAGCGCTCC CGTG GGAGCGCTG ATCTTTAGACGATGC TERM 1847 2445758 - 2445775 + r 76 -12.7 -2.84504 | opp_overlap 2445758 2445756, overlap 2445755 2445753 CTGGAGAAAGAAATA GCGCTCC CGTG GGAGCGC TGATCTTTAGACGAT TERM 1848 2445775 - 2445758 - R 90 -12.7 -3.88703 | opp_overlap 2445755 2445753 2445758, overlap 2445756 CTGGAGAAAGAAATA GCGCTCC CGTG GGAGCGC TGATCTTTAGACGAT Acid345_2041 2446031 - 2445807 - | CsbD-like protein Acid345_2042 2446278 - 2446117 - | hypothetical protein TERM 1849 2446533 - 2446547 + H 72 -11.4 -3.06183 | GGGTCCTTCGACTGC GCGCAC TGC GTGCGC TTCGCTCAGGATGAC Acid345_2043 2446567 - 2447418 + | prephenate dehydratase TERM 1850 2447461 - 2447476 + F 100 -11.8 -4.89009 | opp_overlap 2447453 GCAGCAAGCCCGGCC GCCCGC TGAA GCGGGC TTTTTCCTTCGGTCT TERM 1851 2447654 - 2447682 + G 100 -8.1 -5.52384 | opp_overlap 2447663, overlap 2447656 CTCGCACCGTTTTAT TGGAGAGGACCAC GAT GTGGCCGTCTCTA TTTTTTTGCTCGAGG TERM 1852 2447656 - 2447680 + G 81 -8.5 -4.40552 | opp_overlap 2447663, overlap 2447654 CGCACCGTTTTATTG GAGAGGACCAC GAT GTGGCCGTCTC TATTTTTTTGCTCGA Acid345_2044 2447592 - 2447978 + | hypothetical protein Acid345_2045 2448872 - 2448030 - | hypothetical protein Acid345_2046 2449068 - 2449397 + | PadR family transcriptional regulator Acid345_2047 2449397 - 2452045 + | ABC efflux pump, inner membrane subunit TERM 1853 2452093 - 2452071 - T 90 -12 -4.04579 | opp_overlap 2452069 2452067 2452071 CGCAGAAAGACGAAA GGCGCGAG ACTTATG CTCGCGCC TGTGTTGTCTGCACC TERM 1854 2452071 - 2452093 + T 78 -12 -3.22618 | opp_overlap 2452071, overlap 2452069 2452067 CGCAGAAAGACGAAA GGCGCGAG ACTTATG CTCGCGCC TGTGTTGTCTGCACC Acid345_2048 2452469 - 2452113 - | hypothetical protein Acid345_2049 2452804 - 2455044 + | hypothetical protein TERM 1855 2455083 - 2455107 + T 100 -17.9 -4.66535 | opp_overlap 2455078 2455076 2455083 TTGGAAAAGATGGAA TAGGCGCGGGC GAT GCTCGCGCCTA TTTGTTTTGAGACTT TERM 1856 2455107 - 2455083 - T 100 -15.7 -3.28785 | opp_overlap 2455083, overlap 2455078 2455076 TTGGAAAAGATGGAA TAGGCGCGGGC GAT GCTCGCGCCTA TTTGTTTTGAGACTT Acid345_2050 2455476 - 2455123 - | hypothetical protein TERM 1857 2458201 - 2458174 - g 75 -4 -4.86731 | gap 1, overlap 2458176 CGGTGTGAAAGAAAA GACGCTCGCCGCG AAA CGC-GCAGGCGTG AAGACGATCATCCTG Acid345_2051 2455955 - 2458399 + | ATP-dependent protease La TERM 1858 2458446 - 2458422 - f 75 -11.4 -3.36715 | opp_overlap 2458424, overlap 2458420 2458424 TATAGAAGTAGAAGA GAGGGCTGCC GAGAG GGCAGCCCTT TTTCTTGTGCGAGTT TERM 1859 2458424 - 2458444 + F 100 -14 -5.18726 | opp_overlap 2458422 2458420 2458424 TAGAAGTAGAAGAGA GGGCTGCC GAGAG GGCAGCCC TTTTTCTTGTGCGAG TERM 1860 2458444 - 2458424 - f 95 -14 -3.24091 | opp_overlap 2458424, overlap 2458422 2458420 TAGAAGTAGAAGAGA GGGCTGCC GAGAG GGCAGCCC TTTTTCTTGTGCGAG Acid345_2052 2458597 - 2459496 + | ABC sugar transporter, periplasmic ligand binding protein TERM 1861 2459542 - 2459516 - T 83 -12.2 -3.75153 | opp_overlap 2459518, overlap 2459518 CTCTTCGAACGGAAA CAGGGCTGCCTC GCC GGGGCAGCCCTT GTTGTTTACGTTGAA TERM 1862 2459518 - 2459540 + T 100 -17 -4.1235 | opp_overlap 2459516 2459518 CTTCGAACGGAAACA GGGCTGCCTC GCC GGGGCAGCCC TTGTTGTTTACGTTG TERM 1863 2459540 - 2459518 - T 95 -14.8 -3.46068 | opp_overlap 2459518, overlap 2459516 CTTCGAACGGAAACA GGGCTGCCTC GCC GGGGCAGCCC TTGTTGTTTACGTTG Acid345_2053 2462518 - 2459561 - | hypothetical protein TERM 1864 2462297 - 2462277 - G 82 -6.2 -4.82901 | gap 1, overlap 2462280 GCGCCGGGAGAAAAA TAG-GCGTC TAGA GACGCACTA ATGCCGGCGTCAATG TERM 1865 2462618 - 2462670 + r 100 -9.7 -5.3104 | overlap 2462622 AGGGCAGTGTCCTAA GTCGCGGGAGCTGCGGGCGACTA GGCGATG TGGTCGTCGGGAGCGCCAGCGGC TTTTGTTTTTGGTCC TERM 1866 2462622 - 2462675 + r 76 -5.1 -4.72272 | gap 1, overlap 2462618 CAGTGTCCTAAGTCG CGGGAGCTGCGGGCG-ACTAGGCGAT GTG GTCGTCGGGAGCGCCAGCGGCTTTTG TTTTTGGTCCGGAGG Acid345_2054 2464758 - 2462638 - | putative site-specific recombinase transmembrane protein Acid345_2055 2464812 - 2466575 + | hypothetical protein TERM 1867 2466595 - 2466613 + F 87 -8 -4.66537 | CGCGGTGTTTCTGAA GGGCCGCT GAT GGCAGCCC TTTTCTATTGCGCCA TERM 1868 2467548 - 2467572 + G 71 -12.7 -2.5474 | overlap 2467547 2467546 GGACTCACGCTACGG GCGCGCGATCC GAA GGTGCGCGCGC ATCTTGTGGCTGCGG TERM 1869 2467697 - 2467687 - g 75 -5.4 -4.58466 | TGTACAACGACAAAA TGCT CGC AGCA CACATCGTTCCGGTG Acid345_2056 2466684 - 2468015 + | peptidase M20D, amidohydrolase Acid345_2057 2468043 - 2468729 + | molybdopterin synthase subunit MoaD / molybdopterin synthase subunit MoaE Acid345_2058 2468730 - 2469779 + | von Willebrand factor, type A TERM 1870 2469997 - 2470027 + F 100 -8.8 -5.45652 | overlap 2469998 GCAACGTCTTTTTTT CGGCCGTCTCGTGG ATT CTTCGGGGCGGCCA TTTTTTATTCCCACT TERM 1871 2469998 - 2470026 + F 86 -12.3 -3.86307 | overlap 2469997 CAACGTCTTTTTTTC GGCCGTCTCGTGG ATT CTTCGGGGCGGCC ATTTTTTATTCCCAC TERM 1872 2470266 - 2470302 + G 78 -8.6 -4.12532 | gap 1, overlap 2470269 GTATTACGACAAGGC GATGGTGCGGCTCACCC GCGA GGGAGCGCCGAACC-TC TTTATCTATAAGCAC TERM 1873 2470269 - 2470300 + G 78 -11.4 -3.65996 | overlap 2470266 TTACGACAAGGCGAT GGTGCGGCTCACCC GCGA GGGAGCGCCGAACC TCTTTATCTATAAGC Acid345_2059 2470090 - 2470404 + | hypothetical protein Acid345_2060 2470404 - 2471252 + | inositol-1(or 4)-monophosphatase Acid345_2061 2471865 - 2471287 - | hypothetical protein TERM 1874 2472075 - 2472093 + r 73 -5.2 -4.57073 | overlap 2472076 2472077 TTTGCTGACAAAAGT TTTGCTGG CTG CCAGCGGG TTTTTGGCGCGGATC Acid345_2062 2473756 - 2472620 - | hypothetical protein TERM 1875 2473635 - 2473651 + g 71 -7.3 -4.1466 | TCTCGCGGTTGTAGA TGCCGTT CGA AATGGCA TTTTCCAAATTCGAT Acid345_2063 2474457 - 2473813 - | hypothetical protein Acid345_2064 2475715 - 2474450 - | hypothetical protein TERM 1876 2475151 - 2475138 - G 76 -3.1 -4.89477 | CCCCCAAGAACAAAA TCCTG TTCG CAGAA CCAATCGAAAATCGG TERM 1877 2475885 - 2475857 - R 86 -15.3 -2.99473 | overlap 2475847 GGAAATCAGGAGATA GCGCGGGAACGCC CAC AACGTTCCCGCAC TCAGCCGCCGACAAC Acid345_2065 2476553 - 2476086 - | hypothetical protein TERM 1878 2476913 - 2476886 - R 95 -8.4 -5.00616 | gap 1 CTCCTTCCCAAAAAA GGAGCGGGGAGCG CGC CAGTCCCC-CTCC ACATTGTGTTAGCCC Acid345_2066 2477629 - 2476922 - | hypothetical protein Acid345_2067 2478719 - 2477964 - | hypothetical protein TERM 1879 2479704 - 2479670 - g 71 -7.6 -4.07568 | overlap 2479671 CGCGTTTTTCGAAAA CGCACGGCGTCCCAGC TTT GCTGCTGCGCCGAGCA TAGGAATCGCGAGCG Acid345_2068 2478980 - 2479777 + | hypothetical protein TERM 1880 2479803 - 2479786 - g 81 -3.3 -5.18726 | gap 1 TGCCTAGAAGAAAAA CGCCTGAC CGC GAC-GGCG TGTACCAGCGCAAGG TERM 1881 2480105 - 2480079 - g 73 -10.9 -3.34398 | opp_overlap 2480097 2480097, overlap 2480077 GGCGTCGTCGAAACA CATCTGCACGA TTACT TCGGGCAGATG CAACTGGCCCTTATC Acid345_2069 2479770 - 2480849 + | phage integrase Acid345_2070 2482071 - 2481139 - | hypothetical protein TERM 1882 2481555 - 2481571 + g 76 -12.3 -3.39449 | CCCCGGTGGTCCACA CCCGATC CAC GATCGGG TTGATATTGGTGAAG TERM 1883 2482123 - 2482133 + H 81 -4 -5.18726 | TAAGCGTGGGTCTCT GTTA GTC TAAC TTTTTCTTATGAGAA Acid345_2071 2482142 - 2484031 + | TonB-dependent receptor TERM 1884 2484069 - 2484048 - T 100 -15.9 -4.94487 | TCAGAAAACAGAAAA GGCCTTCCG TTAC CGGAAGGCC TAATCGCGAAGAGCT Acid345_2072 2484954 - 2484085 - | putative outer membrane protein B, OmpB TERM 1885 2485134 - 2485111 - R 100 -11 -4.86731 | opp_overlap 2485110 2485111 CCGGTGCAAAGAAAA GGCTTTCCGA TCGC TCGGAAGGCC CTTGATGTGGGAGAA TERM 1886 2485111 - 2485134 + r 78 -13.2 -2.55351 | opp_overlap 2485111, overlap 2485110 CCGGTGCAAAGAAAA GGCTTTCCGA TCGC TCGGAAGGCC CTTGATGTGGGAGAA Acid345_2073 2486021 - 2485158 - | parallel beta-helix repeat-containing protein TERM 1887 2485341 - 2485316 - G 79 -5.9 -4.72272 | opp_overlap 2485316, overlap 2485318 TGCCCGTAGCAAAAA CGCCGACGCCG CTAT CGGAGGCGGTG GAGTTCTGCAGTGTG Acid345_2074 2486224 - 2487249 + | hypothetical protein Acid345_2075 2487259 - 2488140 + | hypothetical protein TERM 1888 2488836 - 2488820 - g 83 -7.9 -4.59109 | GAGAGTCCGGAAAAA GCGATGC ATC GCGTCGC GGATATCCATAAAGT Acid345_2076 2488241 - 2488900 + | hypothetical protein Acid345_2077 2488950 - 2489363 + | hypothetical protein Acid345_2078 2490383 - 2489367 - | sugar kinase TERM 1889 2490296 - 2490312 + g 79 -7.3 -4.65747 | opp_overlap 2490296 CGGGATGCTCGAATA GTTCTTC GAT GAGGAAC TTTTCTTCGCGATTG TERM 1890 2490807 - 2490770 - R 100 -11.4 -5.35815 | gap 1 GAGAGCAAAGAAAAA CCCGTCCT-ACCGCG CTCACTTGT CGCGATTAGGACGGG TCACCCGAAGCCGTT Acid345_2079 2492952 - 2490823 - | hypothetical protein TERM 1891 2493121 - 2493136 + H 73 -6.2 -4.46073 | GGATTGGCGTTGCAA CTGAAT GGAG ATTCAG TTTATTGTGTTCGGC TERM 1892 2493519 - 2493496 - g 75 -10.4 -3.74251 | gap 1, opp_overlap 2493496, overlap 2493481 GACATCCTGATGAAA GCCATC-AACG CGG CGTTCGATGGC TTCATGCGGCACGCC Acid345_2080 2493250 - 2493909 + | TetR family transcriptional regulator TERM 1893 2494100 - 2494086 - g 88 -11.4 -4.1552 | opp_overlap 2494091 CAGGGCGTGAAGAAA GGCGAC CGC GTCGCC ATCCTGAGCGAGAAC Acid345_2081 2493912 - 2495708 + | AMP-dependent synthetase and ligase TERM 1894 2495763 - 2495734 - T 79 -13.7 -2.80354 | opp_overlap 2495739, overlap 2495739 CAGATTGAGGGAAAC GAAAAGCCTCTCC AAAA GGAGAGGCTTTTG CAAAATGAGTTGAAG TERM 1895 2495739 - 2495758 + T 100 -13.6 -4.09864 | opp_overlap 2495739 2495734 TGAGGGAAACGAAAA GCCTCTCC AAAA GGAGAGGC TTTTGCAAAATGAGT TERM 1896 2495758 - 2495739 - T 100 -13.6 -4.56914 | opp_overlap 2495739, overlap 2495734 TGAGGGAAACGAAAA GCCTCTCC AAAA GGAGAGGC TTTTGCAAAATGAGT Acid345_2082 2497139 - 2496279 - | undecaprenyl-diphosphatase TERM 1897 2497186 - 2497203 + r 70 -9.9 -3.32963 | opp_overlap 2497167, overlap 2497179 TGGTTCGACTGCGAA TGCGGAT TATT ATCCGCA TTCTCGACTCACCAT Acid345_2083 2498191 - 2497235 - | hypothetical protein Acid345_2084 2499218 - 2498220 - | pyridoxal-5'-phosphate-dependent enzyme, beta subunit Acid345_2085 2500286 - 2499246 - | glycosyl transferase, group 1 Acid345_2086 2501077 - 2500289 - | LmbE-like protein dapD 2501147 - 2501983 + | 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase TERM 1898 2502015 - 2502029 + F 72 -11.4 -3.09015 | GGGTCCTTCGACTAC GCGTGC TGC GCACGC TTCGCTCAATATGAC TERM 1899 2502301 - 2502324 + G 76 -7.4 -4.42238 | CCGACGATCGCCACG TCAACGTCCG CGTG CTGGCGTTGA TTTTCCTTCGCCTGA Acid345_2088 2502135 - 2503451 + | sodium--dicarboxylate symporter Acid345_2089 2503750 - 2503448 - | addiction module toxin, RelE/StbE TERM 1900 2503717 - 2503703 - G 72 -8.6 -3.93288 | TTCGATGTAATCAAA GATCGT TTC ACGATC CGCCATCGCAAAGGT Acid345_2090 2504050 - 2503754 - | RelB antitoxin Acid345_2091 2504919 - 2504116 - | hypothetical protein TERM 1901 2505532 - 2505574 + G 70 -2.4 -4.77036 | overlap 2505542 2505543 GTTGAGCGGCGAGGT TATACGCCGAGCGAGCGCGC GGT GCGGGCACGATTTGCGGAGA TTTTTCATCGTGCGC Acid345_2092 2504929 - 2506599 + | beta-lactamase-like Acid345_2093 2506596 - 2506988 + | hypothetical protein Acid345_2094 2507005 - 2507541 + | hypothetical protein Acid345_2095 2507498 - 2508802 + | hypothetical protein Acid345_2096 2508996 - 2509967 + | cysteine synthase Acid345_2097 2509971 - 2510747 + | serine O-acetyltransferase Acid345_2098 2510748 - 2511287 + | hypothetical protein Acid345_2099 2511734 - 2511288 - | hypothetical protein Acid345_2100 2512489 - 2511953 - | ECF subfamily RNA polymerase sigma-24 factor Acid345_2101 2512630 - 2514093 + | TonB-like protein Acid345_2102 2515646 - 2514108 - | leucyl aminopeptidase TERM 1902 2514255 - 2514300 + g 75 -11.9 -3.2614 | gap 1, opp_overlap 2514260, overlap 2514258 GACGAATTCTTTCAG GAACATT-GCTGCCGTGATGGC GCC GCCGTAACGGCCGCCGGTGTTC TTGATGTCGGCGATG Acid345_2103 2516011 - 2515718 - | hypothetical protein TERM 1903 2515966 - 2515942 - G 70 -4.2 -4.63527 | overlap 2515947 2515958 CGAGCAGGCTAAAAA TGATACCGGC GCAAA GCGGGCACCA GATCGCCCATGATCC Acid345_2104 2516554 - 2516135 - | cyclic nucleotide-binding protein Acid345_2105 2517187 - 2516660 - | hypothetical protein TERM 1904 2516801 - 2516785 - G 72 -9.3 -3.72576 | opp_overlap 2516771 CGGTCGCGGACCAAA GCGCGGC CTT GCTGCGC GCGTCGTAAACGATC TERM 1905 2517322 - 2517338 + r 83 -10.8 -4.00042 | opp_overlap 2517322 ACGTCCAATACAAAA CCCGGC GGTTA GCCGGG TTGTTTGATAGCGAG TERM 1906 2517338 - 2517322 - R 95 -10.8 -4.66938 | opp_overlap 2517322 ACGTCCAATACAAAA CCCGGC GGTTA GCCGGG TTGTTTGATAGCGAG Acid345_2106 2518069 - 2517362 - | type IV pilus assembly PilZ TERM 1907 2518217 - 2518199 - R 100 -13.1 -4.74103 | opp_overlap 2518196 2518199 TCCGCAACGGAAAAA GCCCGGC ACGTG GCCGGGC TGGTTGATAAGGAAT TERM 1908 2518199 - 2518217 + r 76 -13.1 -2.78018 | opp_overlap 2518199, overlap 2518196 TCCGCAACGGAAAAA GCCCGGC ACGTG GCCGGGC TGGTTGATAAGGAAT Acid345_2107 2518885 - 2518238 - | hypothetical protein TERM 1909 2519096 - 2519119 + r 70 -5.2 -4.52589 | gap 1, overlap 2519100 2519107 ACGCTTTGTATCAGG GCAGCGCGATC CGC GTTTGCGC-GC TTTTGTATCAGGGCA TERM 1910 2519437 - 2519424 - R 100 -9.5 -5.45802 | opp_overlap 2519409 GCCCCAAAAGAAAAA GGGGC TTTA GCCCC TGCGACGCTTAACTC Acid345_2108 2520747 - 2519446 - | UDP-N-acetylglucosamine 1-carboxyvinyltransferase TERM 1911 2520464 - 2520408 - G 83 -12.2 -3.90112 | gap 2, opp_overlap 2520408 2520447, overlap 2520409 CGCCGGGCAAGGAAA CGCGTGCCTCGCCGGTGCGAGCTACGAG CGG CCCG-AGCAC-CAGCGTCGAGGCGCGCA TGGTTTTCACCAGCT TERM 1912 2520463 - 2520409 - G 77 -13.5 -2.93853 | gap 2, opp_overlap 2520408 2520447, overlap 2520408 GCCGGGCAAGGAAAC GCGTGCCTCGCCGGTGCGAGCTACGAG CGG CCCG-AGCAC-CAGCGTCGAGGCGCGC ATGGTTTTCACCAGC TERM 1913 2520664 - 2520679 + g 70 -3.9 -4.57341 | opp_overlap 2520648, overlap 2520653 CAGGGCAGCCGCCAT CGCGG GCAGGG CTGCG TTTTTCGCGCCACTT TERM 1914 2520767 - 2520757 - H 95 -8.2 -4.88067 | ATCCATTGATAAAAA CCGG GTC CCGG AGTGCCGGAGCAGCT TERM 1915 2521395 - 2521375 - g 87 -12.5 -3.86897 | GTTACCTCCGACAAA CTGGCGGTC GCA GTCCGCCAG GAAGTGAAACAGCAG TERM 1916 2522272 - 2522220 - g 74 -12.5 -2.87931 | opp_overlap 2522219 2522218 TGCATCCGGGATATA TGCCATCGGCGGCGGCGGAACCGGA GCC TCCGGTTACGGTGGCGACGGCGGCA CGTTCTTCGCCGGTA Acid345_2109 2520928 - 2523213 + | hypothetical protein TERM 1917 2523251 - 2523216 - T 100 -22 -4.65747 | opp_overlap 2523216 CAAGTCCGAATAAAA GACACACGCCGGAGCC TTCA AACTCCGGCGTGTGTC TTATTCTACGGGCTG TERM 1918 2523216 - 2523251 + T 100 -20.6 -3.7941 | opp_overlap 2523216 CAAGTCCGAATAAAA GACACACGCCGGAG CCTTCAAA CTCCGGCGTGTGTC TTATTCTACGGGCTG Acid345_2110 2525936 - 2523252 - | glycoside hydrolase family protein Acid345_2111 2526204 - 2526482 + | hypothetical protein Acid345_2112 2526653 - 2526856 + | hypothetical protein TERM 1919 2526869 - 2526857 - T 73 -9.1 -3.91716 | overlap 2526860 CGAGCCCCGAAATAA CGAGG TAG CCTCG TCGTGGGAGAGAGAA Acid345_2113 2527738 - 2527031 - | TonB-like protein TERM 1920 2527794 - 2527824 + r 74 -8.3 -3.92649 | opp_overlap 2527801, overlap 2527794 2527797 CCCGAGAGCAACTTC GGACAAACCCGAT CAGAC ATCGGGGTTGTGC TCTTTATTTGCTTTT TERM 1921 2527817 - 2527801 - R 71 -8 -3.87869 | opp_overlap 2527797 2527794 2527794 GCAACTTCGGACAAA CCCGAT CAGAC ATCGGG GTTGTGCTCTTTATT Acid345_2114 2528075 - 2527806 - | hypothetical protein TERM 1922 2528036 - 2528050 + g 74 -7 -4.28774 | TACGTGCGAGCCACA GCCCGC GAC GCGTGC TTTTAGATTCGATCA TERM 1923 2528814 - 2528846 + H 91 -15 -3.04715 | gap 1, opp_overlap 2528821, overlap 2528815 GTTTTGATTTTACTT TGACAGACTACGGCG TGTG CGCCGTAGTCTG-CG CTTTTGCGGCGGGTG TERM 1924 2528815 - 2528847 + H 95 -12.8 -4.08216 | gap 1, opp_overlap 2528821, overlap 2528814 TTTTGATTTTACTTT G-ACAGACTACGGCG TGTG CGCCGTAGTCTGCGC TTTTGCGGCGGGTGG TERM 1925 2528840 - 2528821 - H 81 -13.6 -2.88544 | opp_overlap 2528814 2528815 TTTTACTTTGACAGA CTACGGCG TGTG CGCCGTAG TCTGCGCTTTTGCGG TERM 1926 2528892 - 2528938 + H 100 -20.4 -4.36914 | overlap 2528887 TCGAGATTTTTGGGT GCCCCATTCTAGCGATTCAC GCTTTTG GTGAATCGTTAGGGTGGGGC TTTTATCAAACGCCA TERM 1927 2529138 - 2529171 + H 70 -6.8 -4.07568 | gap 1, opp_overlap 2529145, overlap 2529145 ATCTACTGGTAACGC TTA-TGAACCCCGGG TGGCT CCCGGGGTTTAGTCA TTTTGGACAAGGCCG TERM 1928 2529163 - 2529145 - H 83 -13.1 -3.16742 | opp_overlap 2529138 2529145 GGTAACGCTTATGAA CCCCGGG TGGCT CCCGGGG TTTAGTCATTTTGGA TERM 1929 2529145 - 2529163 + H 93 -13.1 -3.93057 | opp_overlap 2529145, overlap 2529138 GGTAACGCTTATGAA CCCCGGG TGGCT CCCGGGG TTTAGTCATTTTGGA TERM 1930 2530186 - 2530174 - g 70 -2.7 -4.78848 | TGCGCAAACACAAAA TTCCT CCC AAGAA ACCCGTCGCATCCAT Acid345_2115 2529654 - 2530451 + | hypothetical protein TERM 1931 2530512 - 2530496 - T 84 -13.7 -3.06183 | GTCATCCTGAGCGAA GCAGCGC GAA GCGCTGC GCAGTCGAAGGACCC Acid345_2116 2532501 - 2530555 - | peptidase S9, prolyl oligopeptidase TERM 1932 2530743 - 2530766 + g 87 -7.4 -4.93547 | CTTCGCCGTCGCGAT CGCCGACG AGAATCAG CGTTGGCG TTTTTACTTGCTTCA Acid345_2117 2532604 - 2533323 + | RNA methyltransferase TrmH, group 1 Acid345_2118 2534111 - 2533320 - | agmatinase Acid345_2119 2534736 - 2534119 - | hypothetical protein Acid345_2120 2534841 - 2536442 + | hypothetical protein Acid345_2121 2536919 - 2536443 - | alkylhydroperoxidase AhpD TERM 1933 2536786 - 2536798 + g 72 -4.8 -4.62471 | opp_overlap 2536772 2536795 GCGCAGCCATTCATC TGCG AAGCA CGCA TTTTTACGAGTTCCA Acid345_2122 2538276 - 2537002 - | major facilitator transporter Acid345_2123 2538368 - 2539642 + | TonB-like protein TERM 1934 2539676 - 2539658 - T 100 -13.1 -5.18726 | opp_overlap 2539658 GGCCGACAAGAAAAA GCCCCGC ACGGG GCGGGGC TTGGATCGCGAATCG TERM 1935 2539658 - 2539676 + T 81 -13.1 -3.05816 | opp_overlap 2539658 GGCCGACAAGAAAAA GCCCCGC ACGGG GCGGGGC TTGGATCGCGAATCG Acid345_2124 2540193 - 2539696 - | proteophosphoglycan 5 TERM 1936 2540931 - 2540917 - g 79 -7 -4.57569 | overlap 2540919 CGAGGCGGTGAAAAA GGCGGG CAT CACGCC GGAAGTAGCCGAGAT Acid345_2125 2540354 - 2541100 + | hypothetical protein TERM 1937 2541120 - 2541137 + T 95 -10.5 -4.63048 | AAAGCGATACTTGAA GGCTGCC TTCG GGCGGCC TTTGTTATTTGTCCG Acid345_2126 2541687 - 2541190 - | GCN5-related N-acetyltransferase TERM 1938 2541714 - 2541760 + r 100 -16.7 -4.40804 | opp_overlap 2541723 2541726 2541728, overlap 2541716 AGGAAGGGAAGTCGT TAGGCAAAACAAGAGGCCGGA GAATA TCCGGCCCGTTGTTTTGCCTC TTTTCTGCGGTCGTC TERM 1939 2541716 - 2541758 + r 100 -19.3 -3.80877 | opp_overlap 2541723 2541726 2541728, overlap 2541714 GAAGGGAAGTCGTTA GGCAAAACAAGAGGCCGGA GAATA TCCGGCCCGTTGTTTTGCC TCTTTTCTGCGGTCG TERM 1940 2541751 - 2541723 - R 88 -11 -4.18197 | opp_overlap 2541716 2541714, overlap 2541726 2541728 AGTCGTTAGGCAAAA CAAGAGGCCGGA GAATA TCCGGCCCGTTG TTTTGCCTCTTTTCT TERM 1941 2541747 - 2541726 - R 77 -8 -4.21812 | gap 1, opp_overlap 2541716 2541714, overlap 2541723 2541728 CGTTAGGCAAAACAA GAGGCCGGA GAATA TCCGGCC-C GTTGTTTTGCCTCTT TERM 1942 2541746 - 2541728 - R 83 -11.7 -3.70622 | opp_overlap 2541716 2541714, overlap 2541726 2541723 TTAGGCAAAACAAGA GGCCGGA GAATA TCCGGCC CGTTGTTTTGCCTCT Acid345_2127 2543849 - 2541774 - | phosphoesterase Acid345_2128 2545752 - 2544004 - | multicopper oxidase, type 2 TERM 1943 2544730 - 2544716 - G 71 -12.8 -2.57795 | overlap 2544712 TCGACGATGAACTCA GCCCGG CTT CCGGGC GGCAATCCGATGTGA Acid345_2129 2545959 - 2546588 + | hypothetical protein Acid345_2130 2546617 - 2548089 + | formiminotransferase-like TERM 1944 2548717 - 2548705 - g 71 -10.5 -3.48276 | CCTCTCGGCACAGAA CGGCG ACA CGCCG GGTATCGCGACCAAC Acid345_2131 2548217 - 2549149 + | hypothetical protein TERM 1945 2549166 - 2549187 + T 100 -17.3 -3.96327 | opp_overlap 2549152 TTGTTTGCAGTTCGA GGGCGCTCC TACG GGAGCGCCC TTTCTAATGGAAACT Acid345_2132 2549511 - 2549191 - | hypothetical protein TERM 1946 2549334 - 2549319 - G 79 -5.4 -4.81212 | gap 1 GGTAGGAGAAGAAAA GCG-GGA GCG TCCACGC CAGTTGAATGAGCGC Acid345_2133 2549837 - 2549508 - | hypothetical protein Acid345_2134 2551251 - 2549812 - | radical SAM family Fe-S protein Acid345_2135 2552023 - 2551253 - | prolipoprotein diacylglyceryl transferase TERM 1947 2552095 - 2552071 - R 100 -18.6 -5.4505 | opp_overlap 2552056 CGGCGCAAGAAAAAA TGGGCGCCGG TTTGG CCGGCGCCCA AAAGAGTCAGTTGTG Acid345_2136 2555490 - 2552116 - | TonB-dependent receptor Acid345_2137 2556818 - 2555805 - | glycerol-3-phosphate dehydrogenase (NAD(P)+) Acid345_2138 2557462 - 2556815 - | acyl-phosphate glycerol-3-phosphate acyltransferase Acid345_2139 2558055 - 2557483 - | 2',5' RNA ligase TERM 1948 2558270 - 2558249 - R 100 -8 -5.76237 | gap 1, opp_overlap 2558249 GAGAGAAAGAAAAAA GGCGACTCC CACCC GG-GTCGCC TTTCTCTTTTGCGGC TERM 1949 2558249 - 2558270 + r 85 -9.4 -4.45168 | opp_overlap 2558249 GAGAGAAAGAAAAAA GGCGACTC CCACCC GGGTCGCC TTTCTCTTTTGCGGC Acid345_2140 2559689 - 2558445 - | competence/damage-inducible protein cinA TERM 1950 2559051 - 2559063 + g 76 -3.3 -4.99861 | GGGTTTGGCGAGGAT CGTGG TGT CGACG TTTTTGTACTTGGTG Acid345_2141 2560927 - 2559887 - | hypothetical protein Acid345_2142 2561549 - 2561022 - | phosphatidylglycerophosphatase Acid345_2143 2561766 - 2561524 - | hypothetical protein Acid345_2144 2563283 - 2561769 - | hypothetical protein TERM 1951 2563928 - 2563958 + G 73 -3.2 -4.72486 | overlap 2563930 GATCATTGAGTGCTG GGGTTGGACCGATC CTG GATCGTTCAAACTG TTTTTCGCGTTTCTA TERM 1952 2563930 - 2563956 + G 71 -8 -3.9654 | overlap 2563928 TCATTGAGTGCTGGG GTTGGACCGATC CTG GATCGTTCAAAC TGTTTTTCGCGTTTC Acid345_2145 2563362 - 2564042 + | hypothetical protein Acid345_2146 2566273 - 2564039 - | transglutaminase-like TERM 1953 2566005 - 2565987 - G 70 -4.4 -4.41158 | overlap 2565988 GAGAGAAAGAAATAA TCGGCGGC GTA GACGGCGA CGTAGGCAATCGTGA Acid345_2147 2566414 - 2567274 + | hypothetical protein TERM 1954 2567295 - 2567278 - T 100 -12.7 -5.45802 | GCTGCAAAATAAAAA GCGCGGA TTGC TCCGCGC TCATCGGTGACATTT Acid345_2148 2567992 - 2567318 - | GTP cyclohydrolase II TERM 1955 2567555 - 2567575 + g 71 -7.5 -4.19624 | ACCGAGTTGTTCGTT GGCTTCGAC GGT GTCGAGTCC TTTGTCTTGCAGCTC TERM 1956 2569806 - 2569780 - g 83 -13.6 -3.53012 | opp_overlap 2569773 TTTCCGTCTTTCAAA GCGGGACGCTGG CGC CCAGCGACACGC TATGGCGTTGGATGG Acid345_2149 2568459 - 2571002 + | hypothetical protein TERM 1957 2571018 - 2571048 + T 100 -20.6 -4.36411 | opp_overlap 2571023, overlap 2571023 CGCATTGGTACTGAC GAAAACGCCTGTGC TTA GCGCAGGCGTTTTC TTTTGCTAATTAGTG TERM 1958 2571023 - 2571043 + T 100 -14.7 -5.14626 | opp_overlap 2571023, overlap 2571018 TGGTACTGACGAAAA CGCCTGTGC TTA GCGCAGGCG TTTTCTTTTGCTAAT TERM 1959 2571043 - 2571023 - T 100 -12.5 -4.2828 | opp_overlap 2571023 2571018 TGGTACTGACGAAAA CGCCTGTGC TTA GCGCAGGCG TTTTCTTTTGCTAAT Acid345_2150 2571576 - 2571058 - | hypothetical protein Acid345_2151 2573371 - 2571617 - | pyruvate oxidase Acid345_2152 2573899 - 2573471 - | hemerythrin-like, metal-binding Acid345_2153 2574064 - 2574447 + | putative phophoslipid binding protein TERM 1960 2574578 - 2574557 - g 77 -12.3 -3.61398 | gap 1 CTCGTTTCTGAAGAA GACGC-GCGG CAA CCGCTGCGTC CCGACGGCTGGTCAC Acid345_2154 2574482 - 2574937 + | hypothetical protein Acid345_2155 2575335 - 2574934 - | hypothetical protein TERM 1961 2576000 - 2576020 + G 74 -6.9 -4.2717 | opp_overlap 2575980 2576003 TTCGCATCATGCAGA TCACCAC GGTCATG GTGGTGA TTTTGATCGGCTGGT Acid345_2156 2575459 - 2577699 + | amino acid transporters TERM 1962 2577728 - 2577753 + F 100 -14.1 -3.88232 | gap 1, opp_overlap 2577727 2577726 2577716 ATAGCGCCACAAACG TCCCCGCTC-GT ACC ACAGAGCGGGGA TTCTTGTGTCAGGCG Acid345_2157 2577757 - 2578167 + | hypothetical protein Acid345_2158 2578189 - 2578614 + | hypothetical protein TERM 1963 2578645 - 2578622 - T 100 -16.8 -3.21747 | opp_overlap 2578625, overlap 2578625 TTATTTGAGCAGCAA GAATGGCGGC CGCA GCCGCCATTC TGTGAATCGAATCCG TERM 1964 2578642 - 2578625 - T 86 -12.7 -3.75024 | opp_overlap 2578625, overlap 2578622 TTTGAGCAGCAAGAA TGGCGGC CGCA GCCGCCA TTCTGTGAATCGAAT TERM 1965 2578625 - 2578642 + T 85 -12.7 -3.52102 | opp_overlap 2578625 2578622 TTTGAGCAGCAAGAA TGGCGGC CGCA GCCGCCA TTCTGTGAATCGAAT Acid345_2159 2579074 - 2578667 - | hypothetical protein TERM 1966 2580031 - 2580041 + G 79 -6.8 -4.62441 | GAAGACAAAGCGGCA GGGA AGA TCCC TTTCTTTGTCTGCGC TERM 1967 2580590 - 2580578 - g 82 -10.5 -4.18018 | GCTTCCGACTGAAAA GCGGC GAC GCCGC CAGCGAACAGCTGCT Acid345_2160 2579320 - 2580759 + | aromatic-L-amino-acid decarboxylase Acid345_2161 2581172 - 2580756 - | hypothetical protein TERM 1968 2581002 - 2580992 - G 74 -2.4 -5.00846 | TAAAGACGAGAAAAA CGAC AGG GACG ATGAGGGAACGGTGC TERM 1969 2581066 - 2581046 - G 100 -7.5 -5.88061 | overlap 2581047 AAAAAATCAAAAAAA CCGCCAGCA AAA CGCTGACGA CGATGCCCGCCAAAG TERM 1970 2581065 - 2581047 - G 75 -8.8 -4.07346 | overlap 2581046 AAAAATCAAAAAAAC CGCCAGCA AAA CGCTGACG ACGATGCCCGCCAAA TERM 1971 2581188 - 2581174 - H 71 -11.4 -2.91681 | opp_overlap 2581187, overlap 2581185 TTCCAATGGCACATA GGCGCT GAA AGCGCC GCCAGCAGGCGGTTT TERM 1972 2581187 - 2581200 + H 83 -9.5 -4.18702 | opp_overlap 2581174 2581185 TAGGCGCTGAAAGCG CCGCC AGCA GGCGG TTTCTTCCGAATTAT Acid345_2162 2581408 - 2582391 + | curli production assembly/transport component CsgG TERM 1973 2582506 - 2582533 + G 72 -8.4 -3.86015 | gap 1 CATCTTTGGTTTGAT CGTCGTGGTAGGC GTT GCC-GCCGCGATG TTTCTGCCGAAGATG Acid345_2163 2582414 - 2583154 + | hypothetical protein TERM 1974 2583173 - 2583192 + F 100 -12.8 -4.72272 | overlap 2583183 CGAAAGCATTTCGTC GCGCGGGC TTCG GCTCGCGC TTTTTCATGGGACAA Acid345_2164 2583263 - 2583766 + | hypothetical protein Acid345_2165 2583841 - 2584950 + | metallophosphoesterase Acid345_2166 2585017 - 2586504 + | radical SAM family Fe-S protein Acid345_2167 2587125 - 2586511 - | response regulator receiver protein TERM 1975 2587042 - 2587054 + g 80 -4.8 -4.87665 | CTTCACCACAAACCC GCTG GCGCG CAGC TTTTTCTCCATCGCG TERM 1976 2587552 - 2587533 - H 70 -7 -4.08144 | opp_overlap 2587543, overlap 2587529 TCTACGAAGTAGAAA GCGGCCCC AAGC AGGGTCGC TGAGCCCGCTTCCAT TERM 1977 2587801 - 2587823 + G 86 -6.2 -4.91109 | overlap 2587804 CTGGATCTTTCGGCT GGACTACGGT GAA ACCGTGGGTC TTTTTCTGCTCGGAG TERM 1978 2588347 - 2588374 + G 75 -12 -3.29471 | gap 1, opp_overlap 2588347 TCTTTCGGCGCAATA CGTCGGAGCGCGA GAT TC-CGCACCGACG TTGGTCTACTACGCC TERM 1979 2588374 - 2588347 - g 71 -12 -3.01712 | gap 1, opp_overlap 2588347 TCTTTCGGCGCAATA CGTCGGAGCGCGA GAT TC-CGCACCGACG TTGGTCTACTACGCC Acid345_2168 2587586 - 2588464 + | bile acid--sodium symporter Acid345_2169 2589548 - 2588484 - | hypothetical protein TERM 1980 2588611 - 2588600 - G 70 -2.2 -4.84359 | overlap 2588604 TCACGCCGAGAAAAA CCAC CAGG GTAG GTACCTGATTGCCAC TERM 1981 2588812 - 2588790 - G 70 -4.7 -4.53777 | TGCAACGAAAAACAA CAGGCTCCA CATTC CGGCGCCCG GCAAGCCAACAACGA TERM 1982 2589650 - 2589631 - R 100 -15 -4.85599 | opp_overlap 2589631 GTCAGCGCAGAAAAA CGCCCCGA AAAA TCGGGGCG TTTGCTTAATGTTTA TERM 1983 2589631 - 2589650 + r 100 -15 -4.02075 | opp_overlap 2589631 GTCAGCGCAGAAAAA CGCCCCGA AAAA TCGGGGCG TTTGCTTAATGTTTA Acid345_2170 2591115 - 2589676 - | hypothetical protein TERM 1984 2590368 - 2590393 + g 78 -9 -4.19735 | gap 1, overlap 2590350 GTGGCGCCGCGGTCT TCGGCGTGGCC GTCAG GGCCGCGC-GA TTTACTTTTCCGCCG Acid345_2171 2591405 - 2591737 + | hypothetical protein TERM 1985 2591840 - 2591863 + T 91 -14 -3.06183 | overlap 2591827 2591837 2591843 GGGTGGTTCGACTGC GAATCCGCAT TGGT ATGCGGATTC TTCGCTCACCATGAC TERM 1986 2591843 - 2591860 + T 74 -9.9 -3.67775 | overlap 2591827 2591837 2591840 TGGTTCGACTGCGAA TCCGCAT TGGT ATGCGGA TTCTTCGCTCACCAT Acid345_2172 2593330 - 2591897 - | GntR family transcriptional regulator Acid345_2173 2593388 - 2594467 + | hypothetical protein Acid345_2174 2594428 - 2594781 + | hypothetical protein TERM 1987 2596663 - 2596637 - g 74 -10.9 -3.55563 | gap 1, opp_overlap 2596629 AGGCGATTCTCGAAA GCG-ACGGACGG CCAC CCATCCGTACGC TGACAGATGCTCTGC Acid345_2175 2594941 - 2596806 + | hypothetical protein TERM 1988 2596986 - 2596973 - g 78 -3.7 -5.0133 | overlap 2596974 GACGCGGCGAAAAAA GCGGC GAAG GCGGC GAAAGGGAAGGTCCA Acid345_2176 2596883 - 2597173 + | hypothetical protein TERM 1989 2597197 - 2597212 + T 95 -8.2 -4.8622 | ATCGGAGACGGACTG GCCGCT CACG GGCGGC TTTTTCATTGCACGG Acid345_2177 2597991 - 2597236 - | hypothetical protein TERM 1990 2597570 - 2597601 + g 87 -3.6 -5.4505 | gap 1, opp_overlap 2597568, overlap 2597574 TGCGAGTAATGGACG GCGTGCTCCGT-GTC GAG GACGACGGAGATCAC TTTTTTCTTGAGCAG Acid345_2178 2600255 - 2598534 - | hypothetical protein TERM 1991 2599985 - 2600025 + g 83 -8.3 -4.63932 | overlap 2599986 GTGGGGCAGCGGTGG TGGTGATCTCCTCGAAGTT AGC AATTTCGCGGCGATGACCG TTTTCTTCAAGGGTG Acid345_2179 2601986 - 2600271 - | hypothetical protein TERM 1992 2601215 - 2601180 - G 70 -2.6 -4.75372 | gap 1, opp_overlap 2601195 ATCATTGAGGAAAAA CGGAAAGC-CGCC GGTCGCCCAAA GGAGCGCTTTCCG TCCGGGAATTCCGGC Acid345_2180 2603714 - 2602080 - | hypothetical protein Acid345_2181 2603773 - 2605371 + | hypothetical protein Acid345_2182 2605462 - 2605770 + | hypothetical protein Acid345_2183 2605777 - 2606526 + | glycerophosphoryl diester phosphodiesterase TERM 1993 2606915 - 2606886 - g 88 -15.9 -3.05384 | gap 1, overlap 2606888 TGGCGGTGGACCTAA GATGGTTCGAGCCA GCG TGGC-CGAACCATC TACATGCGATTGGCA TERM 1994 2606913 - 2606888 - g 76 -12.7 -3.08679 | gap 1, overlap 2606886 GCGGTGGACCTAAGA TGGTTCGAGCCA GCG TGGC-CGAACCA TCTACATGCGATTGG Acid345_2184 2606528 - 2607445 + | abortive infection protein TERM 1995 2607742 - 2607719 - f 73 -6 -4.3898 | gap 1, overlap 2607720 2607723 2607733 ACGAGTCGGAGAAAA CGCAGCAGGAA GTA TTCCTGCAG-G ATGAACTGCTGGAGA TERM 1996 2608378 - 2608397 + G 90 -6.4 -5.24129 | overlap 2608379 GCCGGGAGAACTCGG AGATCTGC TGCT GCAGATCC TTTTTTATGCGCAAA TERM 1997 2608379 - 2608396 + G 72 -9.9 -3.73995 | overlap 2608378 CCGGGAGAACTCGGA GATCTGC TGCT GCAGATC CTTTTTTATGCGCAA Acid345_2185 2607869 - 2609086 + | MazG family protein TERM 1998 2609719 - 2609732 + G 78 -8.1 -4.44667 | GCCAAAGAGGTGCAG TCGCG CAAT CGCGA TTTGTTCTTCGACAG Acid345_2186 2609083 - 2609865 + | GCN5-related N-acetyltransferase Acid345_2187 2609862 - 2610971 + | O-succinylbenzoate synthase Acid345_2188 2612003 - 2610978 - | hypothetical protein Acid345_2189 2612702 - 2612052 - | hypothetical protein TERM 1999 2612596 - 2612643 + g 72 -5.5 -4.53602 | gap 2, overlap 2612592 2612594 2612609 GTCAGCGCCTTGCCG GCCGGTGACTCGGGCGCGGCTGC TTCT GC-GCGGCGCTT-ATTAACCGGC TTTGTTTGCTGTGAC Acid345_2190 2613289 - 2612846 - | hypothetical protein Acid345_2191 2613402 - 2613971 + | peptidase S26A, signal peptidase I Acid345_2192 2614047 - 2614499 + | hypothetical protein Acid345_2193 2614541 - 2614882 + | hypothetical protein Acid345_2194 2614994 - 2616115 + | carbamoyl-phosphate synthase small subunit Acid345_2195 2616120 - 2616716 + | hypothetical protein Acid345_2196 2616713 - 2617720 + | hypothetical protein TERM 2000 2619274 - 2619256 - g 79 -5.2 -4.81249 | opp_overlap 2619263, overlap 2619258 GTGGAAAGCGAAAAA TGGCAAGG GCG CCTCGCGA CTGGTTTACGAGAAA TERM 2001 2620335 - 2620316 - g 74 -11.4 -3.54424 | CCCTACGTTTCGAAA GCCACCGG CGTG CCGATGGC GAAGATCGCGGCACG Acid345_2197 2617724 - 2621032 + | carbamoyl-phosphate synthase large subunit Acid345_2198 2621019 - 2621330 + | hypothetical protein Acid345_2199 2621371 - 2622285 + | GntR family transcriptional regulator Acid345_2200 2622361 - 2622783 + | hypothetical protein TERM 2002 2622946 - 2622969 + T 71 -9.6 -3.47573 | gap 1 GGACATTGCATATTG GCGGTGACGGG GGG CCC-TTACCGC TTCTGATATGGATGA Acid345_2201 2623523 - 2622963 - | putative cytochrome P460 Acid345_2202 2623653 - 2624708 + | glycosyl hydrolase Acid345_2203 2625600 - 2624692 - | tRNA pseudouridine synthase B TERM 2003 2626294 - 2626347 + G 83 -11.8 -3.86015 | gap 3 GCAGCCAGCGCGATC TCCGTCCAGCGCGGAGCCACCGGAGGC GTT GCCTTCTG-GGC-CCACGTTGGA-GGA TTTCTAACCGGACTG Acid345_2204 2625667 - 2626422 + | rhomboid-like protein Acid345_2205 2626413 - 2626727 + | hypothetical protein Acid345_2206 2627509 - 2626724 - | short-chain dehydrogenase/reductase SDR Acid345_2207 2627913 - 2627542 - | hypothetical protein TERM 2004 2627818 - 2627829 + g 74 -7.2 -4.26953 | GAGGAGCTTCTTCGG GCCG TCCT CGGC TTTATTCACTTGCTT Acid345_2208 2628558 - 2627959 - | GTP cyclohydrolase Acid345_2209 2628975 - 2628568 - | 6-pyruvoyl tetrahydropterin synthase Acid345_2210 2629385 - 2628972 - | 6-pyruvoyl tetrahydropterin synthase Acid345_2211 2630468 - 2629395 - | glycosyl transferase family protein TERM 2005 2629670 - 2629653 - G 89 -6.2 -5.03145 | overlap 2629641 2629654 GAAGCGCTGAAAAAA CGCGGC TGCCGT GCCGCA AGCCAAAGCCGCGGC Acid345_2212 2630671 - 2631072 + | thioredoxin-like TERM 2006 2631119 - 2631086 - T 87 -8.2 -4.61527 | gap 1, opp_overlap 2631093 2631094, overlap 2631094 AAAACTCCTGAAAAA CGA-AGAAAGCGGGC ACATG GCCCGCCTTTTGTCG TTGGTCTGGCTCCAT TERM 2007 2631093 - 2631111 + T 83 -7.3 -4.57209 | opp_overlap 2631086 2631094, overlap 2631094 CTGAAAAACGAAGAA AGCGGGC ACATG GCCCGCC TTTTGTCGTTGGTCT TERM 2008 2631094 - 2631110 + T 73 -10.8 -3.33241 | opp_overlap 2631086 2631094, overlap 2631093 TGAAAAACGAAGAAA GCGGGC ACATG GCCCGC CTTTTGTCGTTGGTC TERM 2009 2631110 - 2631094 - T 93 -10.8 -4.50686 | opp_overlap 2631094 2631093, overlap 2631086 TGAAAAACGAAGAAA GCGGGC ACATG GCCCGC CTTTTGTCGTTGGTC Acid345_2213 2631544 - 2631134 - | hypothetical protein Acid345_2214 2634178 - 2631638 - | heavy metal translocating P-type ATPase TERM 2010 2632087 - 2632104 + g 84 -6.9 -4.84311 | overlap 2632087 TTCCAAGTTTGGCCG CGACCGC TTCG GCCGTCG TTTTGTTGTCTCCAG TERM 2011 2633358 - 2633332 - G 70 -4.2 -4.56597 | overlap 2633333 GGCTCTCGGGAAAAA TCCCCGGCACGA TGG TCGCGACGGCGC TGTAGATATATGAAA Acid345_2215 2634571 - 2634798 + | hypothetical protein TERM 2012 2635001 - 2634987 - g 75 -10 -3.73224 | opp_overlap 2634987 2634986, overlap 2634991 GGACGCGGCAGCAAA GCCATG CTG CATGGC GTTGTGGCCACGCCC TERM 2013 2635160 - 2635144 - g 77 -2.1 -5.08824 | overlap 2635146 CCTCCACTGAAAAAA GCGCCAC CAA GTGGTCC GATATCGGTATCGGC Acid345_2216 2634858 - 2635595 + | phosphoesterase, PA-phosphatase related Acid345_2217 2636072 - 2635596 - | hypothetical protein TERM 2014 2635632 - 2635652 + g 83 -9.7 -4.33928 | CCCGGGATGATCATC TGGCCGC CGACCGA GCGGCCA TTTGTATTTCCGGTC TERM 2015 2636135 - 2636178 + H 95 -12.5 -4.15788 | gap 1, opp_overlap 2636135 GGAGAGTATTAGAAA GGGCGTTGGTCTGGAGCCTC TGGCC GAAACTCC-GATCAACGCCC TTTCTTGCGCCACTT TERM 2016 2636178 - 2636135 - H 100 -14.7 -4.00782 | gap 1, opp_overlap 2636135 GGAGAGTATTAGAAA GGGCGTTGGTCTGGAGCCTC TGGCC GAAACTCC-GATCAACGCCC TTTCTTGCGCCACTT TERM 2017 2636311 - 2636325 + H 73 -5 -4.62069 | overlap 2636300 GCTTTTTCACGGAGC GGGAAA TTC TTTCTC TTTTTGCCCTGCACA Acid345_2218 2636700 - 2637632 + | protoheme IX farnesyltransferase Acid345_2219 2640246 - 2637658 - | serine/threonine protein kinase TERM 2018 2638281 - 2638254 - G 79 -7.1 -4.65916 | gap 1 GCGATTCGAAGAAAA CAATGGTCTGCC CATCC GG-AGACCACTG CGGCATCATGGCGTA TERM 2019 2638624 - 2638599 - G 71 -8.3 -4.07568 | gap 1 GCGTGCGTTGGAAAA GCT-TGGACGGC GGA GCTGTCCAGAGC TGTCCACCTGACTCG Acid345_2220 2640423 - 2641388 + | daunorubicin resistance ABC transporter ATPase subunit Acid345_2221 2641390 - 2642211 + | ABC multidrug efflux pump, inner membrane subunit Acid345_2222 2642216 - 2642659 + | hypothetical protein Acid345_2223 2642756 - 2643250 + | single-strand binding protein TERM 2020 2643293 - 2643276 - f 85 -12.7 -3.55973 | opp_overlap 2643276, overlap 2643272 CAACTCAAGAACGAA GGCCCTC ACGC GAGGGCC TTTTTCTTTCCGATA TERM 2021 2643276 - 2643293 + F 100 -12.7 -5.28942 | opp_overlap 2643276 2643272 CAACTCAAGAACGAA GGCCCTC ACGC GAGGGCC TTTTTCTTTCCGATA TERM 2022 2644053 - 2644071 + G 74 -11 -3.63515 | CACGATCGCGCTGCC GCTGGTGA TTA TCACCGGC TTCTTCGGCATGAAC Acid345_2224 2643322 - 2644197 + | magnesium and cobalt transport protein CorA TERM 2023 2644497 - 2644507 + G 80 -2.4 -5.18371 | GCGGTGCTTTCGTTG GCGC CGT GCGG TTTTGTTTTCTCGCA TERM 2024 2644823 - 2644792 - g 70 -3.7 -4.66609 | opp_overlap 2644818 CACTTCATCCAAAAA GTCCGTACAGCAA TCGCTT TTTCTTCACGGAC GAGTCCGGTGTGATC TERM 2025 2644880 - 2644859 - g 76 -2.9 -5.01535 | gap 1, overlap 2644860 GGAGAAGGACAAAAA GGCCACGGCT GAC AGC-GCGGCG CTGCAATAGAAGTTA Acid345_2225 2644188 - 2644889 + | hypothetical protein Acid345_2226 2645789 - 2644893 - | TPR repeat-containing protein TERM 2026 2645607 - 2645645 + g 72 -9.7 -3.66178 | gap 1 TTCTTCAAGGCCGCG TCCCATCCGATACCATGC CTGC GCATCGT-TCGGATCGGA TTTGGCCTTCGAGCC Acid345_2227 2645900 - 2646382 + | hypothetical protein TERM 2027 2646822 - 2646799 - g 85 -10.4 -4.2558 | CATCGTCTATGAAAA CCGAAAAGAT ACCT ATCTCTTCGG CATTGGGGACGGAAC Acid345_2228 2646605 - 2647081 + | nuclear protein SET TERM 2028 2647705 - 2647719 + G 78 -11.4 -3.63991 | opp_overlap 2647707 GACGTGATGGCACAG CAGCCC GGC GGGCTG TTCTTCGCGATGATC Acid345_2229 2647198 - 2649642 + | aminopeptidase N-like TERM 2029 2649656 - 2649707 + T 100 -15.3 -4.42386 | gap 2, overlap 2649660 AGCTGTAGAGAGTGA GGTCTGAAGCCGCTACCGGTCCGGC CGAT GTCGG-TCGATAGCGGCTTC-GATC TTTTCTGGCTCGAAA TERM 2030 2649660 - 2649704 + T 87 -15.8 -2.88788 | gap 1, overlap 2649656 GTAGAGAGTGAGGTC TGAAGCCGCTACCGGTCCGGC CGAT GTCGG-TCGATAGCGGCTTCG ATCTTTTCTGGCTCG Acid345_2230 2649931 - 2649668 - | glutaredoxin Acid345_2231 2650895 - 2649945 - | aldo/keto reductase Acid345_2232 2652396 - 2650972 - | short chain fatty acid transporter TERM 2031 2652061 - 2652049 - G 72 -9.1 -3.82824 | overlap 2652027 CAGCATCGAGAACAA CGCGA CCA TCGCG ACAGCGTTTCGGCCG Acid345_2233 2652513 - 2652908 + | response regulator receiver protein Acid345_2234 2653480 - 2652932 - | putative transporter TERM 2032 2653107 - 2653090 - G 75 -4.1 -4.77165 | GGGCCGACAACAAAA TCCCCCA GAAC TGGAAGA AGTATCCCATCACGA Acid345_2235 2653610 - 2654305 + | phosphoribosylformylglycinamidine synthase I Acid345_2236 2655590 - 2654475 - | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding TERM 2033 2655411 - 2655452 + g 75 -5.2 -4.68593 | TTCGGCGTCAATCTT GTCGCGCAGCGTGGT-GATG AGCC CATCGATCCCGCT-CGCAAC TTTTTCGATGATCAG Acid345_2237 2657713 - 2655644 - | transketolase TERM 2034 2657850 - 2657829 - R 87 -15.9 -3.00298 | GCTCGGAACGAGATA GCCCACCAC GTGA GTGGTGGGC ACGTCGAATCCACGA Acid345_2238 2658455 - 2657925 - | hypothetical protein Acid345_2239 2658545 - 2658985 + | endoribonuclease L-PSP Acid345_2240 2659629 - 2659030 - | hypothetical protein TERM 2035 2659788 - 2659809 + H 83 -13.1 -3.26307 | overlap 2659786 CGATTCTCGGGCAGG TCCAGCGAA ACAT TTCGCTGGA TGTTGTGGCGTTCTT TERM 2036 2660004 - 2659989 - g 83 -7.6 -4.68384 | ACCTATTGAAGAAAA TTCTGG ATGG CCAGAA CCAGTTTGCGTCTGG TERM 2037 2660975 - 2661011 + G 76 -12.1 -3.34522 | opp_overlap 2660971 2660973 2660976, overlap 2660976 ACCACCAACGACATC AGCGGACTCGACGCGGC GTT GCTGCGTCCGGGCCGCA TTGATTACAAGCTCT TERM 2038 2660976 - 2661010 + G 81 -15.6 -2.60392 | opp_overlap 2660976 2660971 2660973, overlap 2660975 CCACCAACGACATCA GCGGACTCGACGCGGC GTT GCTGCGTCCGGGCCGC ATTGATTACAAGCTC Acid345_2241 2659967 - 2661214 + | AAA ATPase TERM 2039 2661270 - 2661231 - f 86 -10.1 -4.287 | gap 1, opp_overlap 2661262 2661263 2661264, overlap 2661232 2661262 2661263 AAACAAACGTCAAAA CCCCCACCC-TATCCACA GAAAA CGTGGATAAGGGTGGGAC ACCACATTTTGTAAT TERM 2040 2661269 - 2661232 - f 84 -13.6 -3.15593 | gap 1, opp_overlap 2661262 2661263 2661264, overlap 2661231 2661262 2661263 AACAAACGTCAAAAC CCCCACCC-TATCCACA GAAAA CGTGGATAAGGGTGGGA CACCACATTTTGTAA Acid345_2242 2661324 - 2662949 + | TPR repeat-containing protein Acid345_2243 2665106 - 2663907 - | aminotransferase Acid345_2244 2665648 - 2665241 - | OsmC-like protein Acid345_2245 2667126 - 2665675 - | cation diffusion facilitator family transporter TERM 2041 2666635 - 2666676 + g 71 -10.2 -3.53012 | overlap 2666602 GTGCAACGCGTCGGC CTCAAGCGCCTGGCTG TTGTACTTGT CAGCAATGCGCTTGAG TTTGCGCGACCGCCA Acid345_2246 2667172 - 2668152 + | hypothetical protein TERM 2042 2668887 - 2668839 - g 71 -11 -3.25494 | gap 1 GAGAAGAAGATTCAA TTCGC-GCACGTGGACGACGTCG CGCG CCTCATCGCCCACCTGCTGCGAA GGCCTCCGGATAACG Acid345_2247 2668149 - 2669222 + | NAD-dependent epimerase/dehydratase Acid345_2248 2669975 - 2669223 - | demethylmenaquinone methyltransferase Acid345_2249 2671072 - 2669972 - | 3-dehydroquinate synthase TERM 2043 2671216 - 2671228 + G 71 -10.5 -3.54543 | overlap 2671211 TCATCGTGATCGGCG CCGGC GTC GCCGG TTTACGCGCCTCGAT Acid345_2250 2671173 - 2672741 + | L-aspartate oxidase Acid345_2251 2673392 - 2672742 - | hypothetical protein TERM 2044 2673454 - 2673438 - R 100 -10.8 -5.26119 | GCGGCAAAAACAAAA CCCGCC ACTCG GGCGGG TCTGAGCAAACTTCG Acid345_2252 2674117 - 2673476 - | NADH-quinone oxidoreductase, B subunit TERM 2045 2674169 - 2674155 - R 72 -11.4 -3.06183 | GTCATCCTGAGCGAA GCGTGC GCA GCACGC GCCGTCGAAGGCCCC Acid345_2253 2675065 - 2674205 - | aldo/keto reductase TERM 2046 2674685 - 2674699 + g 75 -10 -3.66178 | opp_overlap 2674684 2674685 ATGGAGTTGCCAAAG GTCGAG CCG CTCGAC TTTCAGGTTGCGCAA Acid345_2254 2675166 - 2675666 + | GCN5-related N-acetyltransferase Acid345_2255 2676398 - 2675673 - | hypothetical protein TERM 2047 2676544 - 2676511 - R 84 -8.8 -4.34402 | overlap 2676513 GGGCCGACAGGAAAA GGTGCTCGCCCGCA ACTTCG CACGGACGAGCAAC CCGTGATGCAGTTAC Acid345_2256 2677290 - 2676556 - | hypothetical protein TERM 2048 2677899 - 2677873 - g 100 -14.4 -4.07124 | TATTACGCAGAGAAA CTCACCGACGGC CGC GCCGTCGCCGAG ATCGCCCCCACGATC Acid345_2257 2677462 - 2678802 + | radical SAM family Fe-S protein TERM 2049 2679539 - 2679519 - g 91 -4.6 -5.50925 | AAGGAATACAAAAAA GACGGCGC GGTGT GCGGCATC GAGTTGCCGAAGGGT Acid345_2258 2679069 - 2680025 + | phosphoribosylaminoimidazole-succinocarboxamide synthase TERM 2050 2680171 - 2680188 + G 71 -10.5 -3.61268 | opp_overlap 2680170 GCGGCATGGGAATAC CGGCGGC TAAC GCCGCTG TTTGCGAATTACGTC TERM 2051 2680219 - 2680232 + G 81 -3.8 -5.08011 | AGTTCGCCATGGGTG GCTG ACATCG CAGC TTTTTTGACAATTTT Acid345_2259 2680036 - 2680590 + | colicin V production protein Acid345_2260 2680634 - 2680912 + | response regulator receiver protein TERM 2052 2680938 - 2680976 + T 100 -20.5 -3.53343 | gap 1, opp_overlap 2680947, overlap 2680939 2680943 CACTCATATTTGTGT TGCATCCAAGGAGCAGCC GACG GGCTGCTCCTTGG-TGCG TTTAACGACAGACTT TERM 2053 2680939 - 2680975 + T 100 -21.8 -2.71791 | gap 1, opp_overlap 2680947, overlap 2680938 2680943 ACTCATATTTGTGTT GCATCCAAGGAGCAGCC GACG GGCTGCTCCTTGG-TGC GTTTAACGACAGACT TERM 2054 2680943 - 2680972 + T 100 -22.3 -2.64155 | opp_overlap 2680947, overlap 2680939 2680938 ATATTTGTGTTGCAT CCAAGGAGCAGCC GACG GGCTGCTCCTTGG TGCGTTTAACGACAG TERM 2055 2680968 - 2680947 - T 93 -15.9 -3.05384 | opp_overlap 2680943 2680939 2680938 TTGTGTTGCATCCAA GGAGCAGCC GACG GGCTGCTCC TTGGTGCGTTTAACG TERM 2056 2681086 - 2681032 - T 100 -16.6 -4.7078 | gap 2, overlap 2681034 GTAAGTAGGCAAAAA GACGCGCTACGGAGGGGGAGACTGCG GGGAA CGAAGTCTCCCC-TCCG-AACGCGTG CCCGCGTTCCCCGCA TERM 2057 2681084 - 2681034 - T 100 -19.2 -3.96486 | gap 2, overlap 2681032 AAGTAGGCAAAAAGA CGCGCTACGGAGGGGGAGACTGCG GGGAA CGAAGTCTCCCC-TCCG-AACGCG TGCCCGCGTTCCCCG TERM 2058 2681260 - 2681307 + T 100 -18.5 -3.59262 | gap 1, opp_overlap 2681258, overlap 2681263 AGGCCCAGAGACACT TTCGGCTCAGTGGGCCCTGGGC TTGTC GCCC-GGGCCTACTGAGCCTCA TTTAGCACTCTAGCA TERM 2059 2681263 - 2681304 + T 100 -24.6 -2.92171 | gap 1, opp_overlap 2681258, overlap 2681260 CCCAGAGACACTTTC GGCTCAGTGGGCCCTGGGC TTGTC GCCC-GGGCCTACTGAGCC TCATTTAGCACTCTA TERM 2060 2681579 - 2681549 - T 100 -13.4 -4.36914 | opp_overlap 2681554, overlap 2681554 TGGTTCCGCAGAAAA GAAAAGAGCAGCCA TTT CGGCTGCTCTTTTT GCGAAACGACTGCTG TERM 2061 2681574 - 2681554 - T 100 -13.3 -5.18371 | opp_overlap 2681554, overlap 2681549 CCGCAGAAAAGAAAA GAGCAGCCA TTT CGGCTGCTC TTTTTGCGAAACGAC TERM 2062 2681554 - 2681574 + T 100 -12.6 -4.56597 | opp_overlap 2681554 2681549 CCGCAGAAAAGAAAA GAGCAGCC ATTTC GGCTGCTC TTTTTGCGAAACGAC Acid345_2261 2683011 - 2681596 - | hypothetical protein TERM 2063 2683891 - 2683873 - g 77 -11.8 -3.62046 | TCACTCCGCCAAGAA CGAAAGCA AGA TGCTTTCG GCGGACGATATCGCG Acid345_2262 2683253 - 2683987 + | short-chain dehydrogenase/reductase SDR Acid345_2263 2684038 - 2684532 + | hypothetical protein Acid345_2264 2684620 - 2684925 + | hypothetical protein Acid345_2265 2684939 - 2685463 + | hypothetical protein TERM 2064 2685504 - 2685488 - T 75 -11.5 -3.45768 | opp_overlap 2685488 GTTAACAGGAACGAA GGCCGCC ACA AGCGGCC TTTTTCGTTTGTCGA TERM 2065 2685488 - 2685504 + T 100 -10.8 -5.04601 | opp_overlap 2685488 GTTAACAGGAACGAA GGCCGC CACAA GCGGCC TTTTTCGTTTGTCGA Acid345_2266 2686330 - 2685596 - | short-chain dehydrogenase/reductase SDR TERM 2066 2686284 - 2686256 - G 73 -11 -3.33815 | gap 1 ACCTTCTTCAACGAA GC-GCTTGGCGCT CGCC AGCGCCATGCCGC TCGATCCTCCAGTGA Acid345_2267 2686480 - 2687409 + | AraC family transcriptional regulator Acid345_2268 2688548 - 2687889 - | hypothetical protein TERM 2067 2688861 - 2688886 + r 70 -3.3 -4.72007 | gap 1, opp_overlap 2688857, overlap 2688862 ATAGAGGAAACGAGC TCG-AACTCTTC TTC GACGAGTTACGG TTTCTTTTGCTGGAA Acid345_2269 2689666 - 2688881 - | hypothetical protein Acid345_2270 2691058 - 2689946 - | tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase TERM 2068 2691036 - 2691048 + g 72 -4.8 -4.68705 | overlap 2691035 CCCGACATGGCTACC GCGA TTGTC TCGC TTTTGTTCAAATTCT Acid345_2271 2692232 - 2691564 - | semialdehyde dehydrogenase, NAD - binding TERM 2069 2691934 - 2691909 - G 72 -6.7 -4.35885 | gap 1, overlap 2691895 2691905 ACTCACCAGAAGAAA CCGCTGAGCGCC CTT GGCGAGC-GCGG CTTCGGCGAAGGTCA Acid345_2272 2693648 - 2692272 - | cytochrome c, class I TERM 2070 2692307 - 2692321 + g 78 -8.6 -4.24123 | CCTCGTTCATCTCGC CCAAAC CGT GTTTGG TTTTGCACTTCTTGC TERM 2071 2693417 - 2693400 - G 73 -3.3 -4.78764 | gap 1 CAAATTTACGAAAAA CGCTGACC GCC GGGC-GCG CGCAAAAGCGCGCAA TERM 2072 2693572 - 2693593 + g 73 -13.1 -2.71731 | opp_overlap 2693560, overlap 2693574 2693582 AAACGTGCCGGGCGA CAGTTGCAG ACTT CTGCAACTG TAGTTGCGGCATCGC Acid345_2273 2695093 - 2693675 - | integrin-like protein TERM 2073 2695221 - 2695209 - R 71 -6.2 -4.27316 | CGCTGCAATGTAAAA CGCG GATGA CGCG TCGTGCGCAACTTCG TERM 2074 2695414 - 2695390 - R 76 -10.7 -3.72788 | GGCTACAAGAGAGAA GAGGCGCCC CTGTTGT GAGCGCCTC CTACTGACGTGATCG Acid345_2274 2696845 - 2695436 - | integrin-like protein Acid345_2275 2698126 - 2696966 - | aminotransferase, class V TERM 2075 2698338 - 2698308 - R 90 -16.9 -2.7263 | opp_overlap 2698313, overlap 2698313 AGGATTCGGCCAAAG CAAAAGGCCCGCC GTTCG GGCGGGCCTCTCG TAAAACCATGGAATG TERM 2076 2698333 - 2698313 - R 100 -15.4 -4.54727 | opp_overlap 2698313, overlap 2698308 TCGGCCAAAGCAAAA GGCCCGCC GTTCG GGCGGGCC TCTCGTAAAACCATG TERM 2077 2698313 - 2698333 + r 83 -15.4 -2.78596 | opp_overlap 2698308 2698313 TCGGCCAAAGCAAAA GGCCCGCC GTTCG GGCGGGCC TCTCGTAAAACCATG Acid345_2276 2699497 - 2698355 - | citrate synthase TERM 2078 2698569 - 2698554 - G 74 -7.6 -4.21439 | opp_overlap 2698553 2698550 GAAGCCGAATAGAAA TCAACG TTGG CGTTGA GCTTCTTTTCCGACT Acid345_2277 2699778 - 2701883 + | dipeptidyl-peptidase 7 TERM 2079 2701893 - 2701930 + F 89 -13.6 -3.63336 | gap 1, overlap 2701890 2701891 CAGTAATCGTAGTGG GTGCCCCATCCTATTCG GATAG CGGATAGGGTGGGG-AC TTTGAAGTACTATCT Acid345_2278 2701981 - 2703048 + | hypothetical protein Acid345_2279 2703183 - 2704652 + | metallophosphoesterase TERM 2080 2704723 - 2704750 + G 80 -9.9 -4.10161 | opp_overlap 2704723 TGTTCCGGTCATCAA GTGCAGTGACT TGCAAC GGTCGCTGCAC TTTTACACCGTGATA Acid345_2280 2704700 - 2705077 + | glyoxalase/bleomycin resistance protein/dioxygenase Acid345_2281 2705484 - 2705074 - | glyoxalase/bleomycin resistance protein Acid345_2282 2705840 - 2705511 - | rhodanese/sulfurtransferase-like protein TERM 2081 2706556 - 2706536 - g 75 -10.3 -3.65522 | opp_overlap 2706544, overlap 2706509 TACGCACTTCAAGAA GCGCGACCG GCT CGGGCGCAC CCTGGTCTTTCTGGC Acid345_2283 2705889 - 2706884 + | cyanophycinase and related exopeptidase-like TERM 2082 2706932 - 2706899 - T 71 -8.1 -3.86202 | opp_overlap 2706905, overlap 2706905 GCGCATCAGAGTAAA TGAGAAGGGCGTCTC GCGA GAGACGCCCTTTTTG CTGCTGCACAAGTTT TERM 2083 2706905 - 2706926 + T 100 -15.9 -4.77036 | opp_overlap 2706899 2706905 CAGAGTAAATGAGAA GGGCGTCTC GCGA GAGACGCCC TTTTTGCTGCTGCAC TERM 2084 2706926 - 2706905 - T 100 -15.9 -3.6392 | opp_overlap 2706905, overlap 2706899 CAGAGTAAATGAGAA GGGCGTCTC GCGA GAGACGCCC TTTTTGCTGCTGCAC Acid345_2284 2707551 - 2706946 - | Ig-like, group 2 Acid345_2285 2708602 - 2707667 - | beta-lactamase-like Acid345_2286 2709667 - 2708690 - | glycosyl transferase family protein TERM 2085 2709042 - 2709028 - G 75 -5.6 -4.70169 | GCAGATCGAAGAAAA CGCGGA AGG TGCGCG AGATGCCGTAGTGCG Acid345_2287 2710544 - 2709798 - | hypothetical protein Acid345_2288 2711722 - 2710550 - | aminotransferase Acid345_2289 2711837 - 2712526 + | hypothetical protein TERM 2086 2712718 - 2712704 - g 72 -8.5 -3.90318 | CGATGAGCGGACAAA CCCGC GACTT GCGGG CTCGTAACGTTGGCG Acid345_2290 2712610 - 2713173 + | molybdopterin oxidoreductase Fe4S4 region TERM 2087 2713185 - 2713203 + F 83 -12.4 -3.63744 | opp_overlap 2713181, overlap 2713183 ATGACACAGCAGCAC GGTGCCCG GTC TGGGCACC TCTTTTGGACGCGGC TERM 2088 2714560 - 2714536 - g 72 -5 -4.58395 | GGGACCGCGGAAAAA GCCGGATGTT TCACC AACACCCAAC GCCTCGTCCAATACC Acid345_2291 2713186 - 2715798 + | formate dehydrogenase Acid345_2292 2715795 - 2716577 + | formate dehydrogenase beta subunit Acid345_2293 2716574 - 2717695 + | polysulphide reductase, NrfD Acid345_2294 2719306 - 2717696 - | Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase TERM 2089 2719721 - 2719733 + G 76 -6.9 -4.51812 | GGCCGCGATCTTTAT CGCCG GCG TGGCG TTTATTCTTCTCACG TERM 2090 2720647 - 2720681 + G 72 -5.6 -4.48317 | TTCGCGAACTGAAGC CAGGACTGTGGGTGTT GTC GGCACTCTCGCTCCTG TTCTTTGTTTTCTAC Acid345_2295 2719398 - 2720708 + | xanthine/uracil/vitamin C transporter TERM 2091 2722041 - 2722031 - g 74 -6.8 -4.36914 | overlap 2722034 TGGCGGCGTACAAAA CAGC GGC GCTG ACTTCGCAGAATCCA Acid345_2296 2720838 - 2722454 + | hypothetical protein TERM 2092 2722480 - 2722463 - T 100 -14.1 -4.20981 | opp_overlap 2722459 GCAATAAAGCAGAAA GCCCGGC TTGC GCCGGGC TCACTCTGATCAGCC Acid345_2297 2723177 - 2722524 - | hypothetical protein TERM 2093 2722771 - 2722804 + g 79 -13.2 -3.46982 | gap 1, overlap 2722769 ACGATTTCACGGGTT CCGAGCGGGACCGAG TATTC CTCGGTGCCG-TCGG TGTTCTTGGTATGGG TERM 2094 2723432 - 2723409 - R 100 -14.6 -4.55023 | opp_overlap 2723409, overlap 2723429 CGGAAGACGACAAAA GGCCCGTGCT TTCG AGCACAGGCC TTCTCGAGAGAAGAG TERM 2095 2723409 - 2723432 + r 78 -12.4 -3.28712 | opp_overlap 2723409 2723429 CGGAAGACGACAAAA GGCCCGTGCT TTCG AGCACAGGCC TTCTCGAGAGAAGAG Acid345_2298 2724128 - 2723460 - | hypothetical protein TERM 2096 2724288 - 2724302 + r 71 -10 -3.59262 | GTTTTAGCGGAAGGT CTGCTG AAT CAGCAG TTTCGGACTATCACA Acid345_2299 2725579 - 2724578 - | TPR repeat-containing protein TERM 2097 2725164 - 2725191 + g 78 -14.1 -2.68071 | opp_overlap 2725163, overlap 2725162 2725181 2725188 TTAGGGACAGTGAAC CCGCTTGCGGG TGCCAC CCCGCCAGCGG TGGGTTTCCCTTCGA TERM 2098 2725181 - 2725195 + g 72 -9.2 -3.75897 | opp_overlap 2725163, overlap 2725164 2725162 2725188 GCTTGCGGGTGCCAC CCCGCC AGC GGTGGG TTTCCCTTCGACCTT Acid345_2300 2727832 - 2725649 - | hypothetical protein Acid345_2301 2728492 - 2727953 - | hypothetical protein TERM 2099 2728094 - 2728070 - G 81 -4.3 -5.04385 | gap 1, overlap 2728074 2728075 CAGAGGGGCAAAAAA GAACCGCCGG TTGAAC CCGGC-ATTC ACGCGCACATCAGAG Acid345_2302 2729303 - 2728611 - | cytochrome c assembly protein Acid345_2303 2729980 - 2729300 - | cytochrome c-type biogenesis protein CcmB Acid345_2304 2730657 - 2729977 - | ABC transporter, ATPase subunit Acid345_2305 2731152 - 2730691 - | cytochrome c-type biogenesis protein, CcmE-like Acid345_2306 2731796 - 2731239 - | isochorismatase hydrolase TERM 2100 2731283 - 2731303 + g 77 -8.3 -4.38154 | TCTCCGTGGTCTCAA TTTCCCCCA GCC TGGGGAAAA TTTTCTCCAGACTGT Acid345_2307 2731912 - 2733381 + | thiamine biosynthesis protein ThiC TERM 2101 2733391 - 2733417 + T 87 -8 -4.66347 | opp_overlap 2733385 2733382 AAATAAGACCGGGTG CCCCGTCC GCGATGTGATA GGACGGGG TTTCTCTTTTTTACT Acid345_2308 2733955 - 2733428 - | hypothetical protein TERM 2102 2734088 - 2734106 + H 80 -4.5 -5.00616 | opp_overlap 2734088 GACTCATCAAGAACA CCGCG AGCCGTCAG CGCGG TTTTTTCGAGGCGGA Acid345_2309 2734125 - 2736251 + | carbohydrate binding protein Acid345_2310 2738781 - 2736256 - | TPR repeat-containing serine/threonin protein kinase TERM 2103 2737350 - 2737365 + g 70 -4 -4.56597 | gap 1, overlap 2737350 2737351 CGAGCACCTGGGTAT C-GTTCG CAC CGAACAG TTTTTCGCGAACCGA TERM 2104 2738877 - 2738857 - R 100 -11.8 -5.00642 | CAACGGACAGAAAAA GGCCCGCC TCATC GACGGGCC TTAACGCTTGGAATC Acid345_2311 2740326 - 2738896 - | hypothetical protein TERM 2105 2738952 - 2738978 + g 78 -14.4 -2.62184 | GCGATCCTGGCGACA CGGTCATCGGCG TAC CGCCGGTGGTCG TGATCTCACCCGGCG Acid345_2312 2741063 - 2740563 - | DinB TERM 2106 2740753 - 2740737 - G 73 -11.5 -3.36273 | opp_overlap 2740737 2740736 2740735 GTCGCGGAACAGGAA CCGCCAC TCC GCGGCGG CCTTTTCTGGAGTCA Acid345_2313 2741841 - 2741125 - | hypothetical protein TERM 2107 2741871 - 2741847 - R 100 -4.2 -5.7946 | overlap 2741848 GTGTGAACAAAAAAA TTCCCCACAG CAGAC CTGCAGGGAG GAGCAAGGAAATCGG TERM 2108 2741870 - 2741848 - R 71 -7.7 -4.06592 | overlap 2741847 TGTGAACAAAAAAAT TCCCCACAG CAGAC CTGCAGGGA GGAGCAAGGAAATCG Acid345_2314 2742306 - 2741893 - | cyclic nucleotide-binding protein Acid345_2315 2743076 - 2742570 - | GCN5-related N-acetyltransferase TERM 2109 2742911 - 2742922 + g 78 -3.6 -4.99134 | CGGCCTCAGCGATCA CGGT AAAT GCCG TTTTTAGTTTGACGT TERM 2110 2743126 - 2743100 - R 76 -12.3 -3.12749 | opp_overlap 2743102, overlap 2743102 GTAACAATGGTAAGA CACGGCGTGAG TTAGG CTCACGCCGTT CTGCGTTACGCGGCT TERM 2111 2743124 - 2743102 - R 91 -14.9 -3.11727 | opp_overlap 2743102, overlap 2743100 AACAATGGTAAGACA CGGCGTGAG TTAGG CTCACGCCG TTCTGCGTTACGCGG TERM 2112 2743102 - 2743124 + r 100 -15.6 -3.41878 | opp_overlap 2743100 2743102 AACAATGGTAAGACA CGGCGTGAGT TAG GCTCACGCCG TTCTGCGTTACGCGG Acid345_2316 2743701 - 2743132 - | peptidase C56, PfpI Acid345_2317 2743889 - 2744356 + | putative anti-sigma regulatory factor, serine/threonine protein kinase Acid345_2318 2744570 - 2748535 + | hypothetical protein Acid345_2319 2748765 - 2750270 + | radical SAM family Fe-S protein TERM 2113 2750286 - 2750307 + F 100 -15.9 -5.1356 | GTTGGTTTTATCCAG TGGCACGGC TTCG GCCGTGCCA TTTTTATTGGTGAGC Acid345_2320 2750439 - 2750858 + | hypothetical protein Acid345_2321 2750855 - 2751235 + | hypothetical protein Acid345_2322 2751300 - 2752871 + | radical SAM family Fe-S protein Acid345_2323 2752874 - 2753632 + | hypothetical protein TERM 2114 2754377 - 2754388 + G 76 -4.4 -4.7254 | GAACATCACACGGGG TCCA TTTA TGGA TTTTTGGTCGGCGAT Acid345_2324 2753708 - 2754634 + | hypothetical protein TERM 2115 2754674 - 2754688 + F 72 -11.4 -3.06183 | GGGTCCTTCGACTTC GCGACC TTT GGTCGC TTCGCTCAGGATGAC Acid345_2325 2754739 - 2756091 + | oxidoreductase TERM 2116 2756107 - 2756139 + F 90 -12 -4.06687 | gap 1, overlap 2756109 TTGCTCGCCTCTGCT C-TGGGCTTCCGCTC AACC GGGCGGAAGCCCTCG TTGTTTCTCCACGGT TERM 2117 2756109 - 2756136 + F 100 -19.2 -3.07135 | overlap 2756107 GCTCGCCTCTGCTCT GGGCTTCCGCTC AACC GGGCGGAAGCCC TCGTTGTTTCTCCAC Acid345_2326 2756166 - 2756699 + | GCN5-related N-acetyltransferase Acid345_2327 2756761 - 2757387 + | hypothetical protein TERM 2118 2759238 - 2759227 - g 78 -3.6 -4.87893 | AATCCGAAGGAAAAA GCCG CCTT CGAC TACATGTATTCCTAC Acid345_2328 2757421 - 2759514 + | oligopeptidase B TERM 2119 2759532 - 2759550 + F 100 -13.8 -5.5604 | opp_overlap 2759531 2759530, overlap 2759546 CGTTCCTGTGAAATG GCCCGCCG CTA TGGCGGGC TTTTTTGTTGCTTCA Acid345_2329 2759738 - 2762713 + | Alpha-1,6-glucosidases, pullulanase-type TERM 2120 2762751 - 2762725 - T 84 -9.4 -4.33417 | overlap 2762741 TTGACTGACAACAAA GAGGAGGGGC CCAAAAC GCTCCTCCTC AAAGTAACAGCGAGG Acid345_2330 2763205 - 2762774 - | hypothetical protein TERM 2121 2763443 - 2763433 - g 72 -4.6 -4.56597 | overlap 2763435 TGGCTGGGCGAAAAA CGGC ATC GCCA TCGAGCGGAAGTACG TERM 2122 2763527 - 2763500 - g 70 -4.7 -4.42464 | gap 1, overlap 2763501 2763502 AAGTTCGTAAACAAA GTCGCGGACGCC GCCGA GGCGGCCG-GCC ATCATCCTGACATCC Acid345_2331 2763365 - 2763649 + | pterin-4-alpha-carbinolamine dehydratase TERM 2123 2763677 - 2763658 - f 100 -11.4 -4.78848 | opp_overlap 2763658 CCCGTAAAGAGAAAA GGCTGGCA GGTT CGCCAGCC TATCTCATTCGAGCG TERM 2124 2764064 - 2764080 + F 70 -6.5 -4.08767 | CCGAATTGCGAAACT CTCGTCG AAC CGATGGG TTTTAGAGCGGTAAG TERM 2125 2764309 - 2764255 - g 85 -14.9 -3.1505 | gap 1, opp_overlap 2764267 ATCACCGGTCAGGAA CCCGCCGCAGAGCCAGCCGC-CGAAC CGGC GCCCGAGCCGCCAGCTTCGCGGCAGG TTTATGAGGCCGTCG TERM 2126 2764267 - 2764309 + G 81 -11 -3.86346 | opp_overlap 2764255 GAACCCGCCGCAGAG CCAGCCGCCGAACCGGCGCC CGA GCCGCCAGCTTCGCGGCAGG TTTATGAGGCCGTCG Acid345_2332 2764132 - 2764866 + | hypothetical protein TERM 2127 2764887 - 2764934 + F 84 -9.1 -4.26076 | gap 1, opp_overlap 2764887 2764892, overlap 2764892 TTTGGATTACGAAAA TACGACGGCGCAGTCCAACTAG CTATA CCGGG-GGACTGCGCCGCTGTA TTTTGGTGGCAGTCG TERM 2128 2764934 - 2764887 - f 86 -9.8 -4.30576 | gap 1, opp_overlap 2764887 2764892, overlap 2764892 TTTGGATTACGAAAA TACGACGGCGCAGTCCAACTAGC TAT ACCGGG-GGACTGCGCCGCTGTA TTTTGGTGGCAGTCG Acid345_2333 2764968 - 2765702 + | hypothetical protein Acid345_2334 2765717 - 2766439 + | hypothetical protein TERM 2129 2766516 - 2766468 - f 83 -15.2 -2.66106 | overlap 2766465 2766464 CACTTTAACAAGCGA TTCCGTCACGGCGCGAAGAGAC AGCAG GACACTCCGCGCCGTGACTGCA AGAACACCACCCTTC Acid345_2335 2766677 - 2766979 + | hypothetical protein TERM 2130 2766985 - 2767010 + F 100 -8.9 -5.52909 | opp_overlap 2766984, overlap 2766986 AGGACATTGAACGAG CCCGGTGCTGC GCGA GTGGCACCGGC TTTTTTTCAATCTTG TERM 2131 2766986 - 2767009 + F 86 -12.4 -3.90118 | opp_overlap 2766984, overlap 2766985 GGACATTGAACGAGC CCGGTGCTGC GCGA GTGGCACCGG CTTTTTTTCAATCTT Acid345_2336 2767044 - 2768705 + | radical SAM family Fe-S protein Acid345_2337 2769103 - 2768702 - | CoA-binding protein Acid345_2338 2770330 - 2769125 - | hypothetical protein TERM 2132 2770209 - 2770198 - G 70 -3.6 -4.56597 | CCTCTTTGCCAAAAA CAGG ATGG CCCG CAAGGTAGACGAGAA Acid345_2339 2770979 - 2770335 - | metal dependent phosphohydrolase Acid345_2340 2772622 - 2771591 - | peptide chain release factor 2 TERM 2133 2771808 - 2771822 + g 74 -7.8 -4.12456 | overlap 2771806 TCTTCGACTTTCTGC GAGGCG GCG CGCTTC TTTTCCAACTCGTAT TERM 2134 2771867 - 2771900 + g 75 -12.4 -3.30243 | overlap 2771866 GCGAAGGATCTTCAT CGCGCGTTCGCGGT TCTTAT GCTGCGAACGCTCG TTCTGACAGCTCACT Acid345_2341 2774317 - 2772737 - | apolipoprotein N-acyltransferase TERM 2135 2774334 - 2774368 + r 74 -8.6 -3.9534 | CCCCATGCCTGCTTA TGGATTCGCTTCACTC ATC GAGTGTAGCAAATACA TTTGTGGATATAGGT Acid345_2342 2775271 - 2774384 - | bifunctional deaminase-reductase-like TERM 2136 2774764 - 2774815 + g 73 -11.8 -3.06796 | gap 4 CAACGTGCGACGGCA G-CGAGCCGAGGT-TCGTGGCT-CCG AGTT CGGTGGTCACGATACC-CGGCTCGAC TTGGCTGCCGTCGAA TERM 2137 2775251 - 2775261 + g 71 -6.8 -4.1585 | AAAAAGAATTTCGAA TGGC TCG GCCA TTTTCACCATTGTAC Acid345_2343 2775336 - 2776208 + | hypothetical protein Acid345_2344 2776819 - 2776211 - | hypothetical protein Acid345_2345 2777833 - 2776832 - | UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase TERM 2138 2776905 - 2776921 + g 70 -3.6 -4.56775 | overlap 2776907 AGAGGCTTGGCCGGC GTTCCG AAACA CGGACC TTTTTCGCGGAAGAT TERM 2139 2777520 - 2777497 - G 78 -9.6 -4.07568 | gap 1 CCTCGGCGCCGAAAA CGACGGTCGGT GGA ACC-ACCGCCG TGGGATGCACGATGC Acid345_2346 2778800 - 2777892 - | lipid A biosynthesis acyltransferase TERM 2140 2778820 - 2778802 - R 70 -8.8 -3.64162 | overlap 2778795 2778805 AGCAAGGATCGCAAA GAGCGACG GTA CACCGCTC GAAAATTTGAGTCAA TERM 2141 2778874 - 2778837 - R 86 -12.7 -3.67989 | opp_overlap 2778845, overlap 2778842 2778845 AAAATTTGAGTCAAA CGAGAGAAGGCGGTGGA TTGC TCCACCGCCTTCGATAG GCCCTCAAAGAGATT TERM 2142 2778869 - 2778842 - R 100 -20 -3.02324 | opp_overlap 2778845, overlap 2778837 2778845 TTGAGTCAAACGAGA GAAGGCGGTGGA TTGC TCCACCGCCTTC GATAGGCCCTCAAAG TERM 2143 2778866 - 2778845 - R 100 -15.9 -3.65112 | opp_overlap 2778845, overlap 2778842 2778837 AGTCAAACGAGAGAA GGCGGTGGA TTGC TCCACCGCC TTCGATAGGCCCTCA TERM 2144 2778845 - 2778866 + r 93 -15.9 -3.05816 | opp_overlap 2778842 2778837 2778845 AGTCAAACGAGAGAA GGCGGTGGA TTGC TCCACCGCC TTCGATAGGCCCTCA Acid345_2347 2779712 - 2778888 - | hypothetical protein TERM 2145 2778916 - 2778948 + g 82 -13.3 -3.24188 | overlap 2778941 TCGTCGGCACTTGCT GTCGGCTGGGACGGG ATG TCCGACTCGGCCGGC TTGGTCGTGGTATCG TERM 2146 2780042 - 2780023 - R 100 -16.4 -3.27565 | overlap 2780015 2780018 AAGCACACAAGGTAA CCCCCGCC ATAG GGCGGGGG GACAAAGCGTCTTGC Acid345_2348 2780730 - 2780071 - | two component LuxR family transcriptional regulator Acid345_2349 2780854 - 2781270 + | hypothetical protein Acid345_2350 2782243 - 2781284 - | zinc-binding alcohol dehydrogenase Acid345_2351 2783192 - 2782290 - | hypothetical protein Acid345_2352 2783642 - 2784205 + | hypothetical protein TERM 2147 2784228 - 2784209 - T 86 -12.8 -3.71848 | opp_overlap 2784209 CTGTTGCACTAAGAA GCGGCGCC CGAA AGCGCCGC TCTTCCCTACTGGTC TERM 2148 2784209 - 2784228 + T 76 -12.1 -3.11272 | opp_overlap 2784209 CTGTTGCACTAAGAA GCGGCGC CCGAAA GCGCCGC TCTTCCCTACTGGTC Acid345_2353 2787381 - 2784235 - | hypothetical protein Acid345_2354 2787470 - 2787955 + | hypothetical protein Acid345_2355 2788033 - 2788419 + | fibronectin, type III Acid345_2356 2789544 - 2788420 - | DNA polymerase III, delta subunit Acid345_2357 2790071 - 2789544 - | hypothetical protein Acid345_2358 2791120 - 2790068 - | aspartate semialdehyde dehydrogenase Acid345_2359 2791997 - 2791134 - | CDP-diacylglycerol--serine O-phosphatidyltransferase Acid345_2360 2792683 - 2792018 - | phosphatidylserine decarboxylase-related protein TERM 2149 2792796 - 2792755 - R 93 -10.8 -4.50859 | gap 1, opp_overlap 2792752, overlap 2792749 CAATGAAAAGAGAAA GCCTCCGC-AGGCGACACG ACACA CGTGAGGCATTGCGGAGGC CGGGTTCTCTGTATC TERM 2150 2792872 - 2792858 - R 74 -10 -3.76413 | CGCGAAAAGGCTAAA CGTAGC TAG GCTACG TGATGCTGCTCCTTG Acid345_2361 2793090 - 2792863 - | hypothetical protein Acid345_2362 2793665 - 2793189 - | SSU ribosomal protein S18P alanine acetyltransferase Acid345_2363 2794345 - 2793662 - | peptidase M22, glycoprotease TERM 2151 2793829 - 2793843 + g 72 -5.6 -4.46212 | overlap 2793830 CGAGCCTGGCTTCAC GCGCGA AGC TCGCGA TTTTCTCGTCGGCAA Acid345_2364 2794756 - 2794349 - | methylmalonyl-CoA epimerase Acid345_2365 2795747 - 2794791 - | LAO/AO transport system ATPase Acid345_2366 2795820 - 2797052 + | putative oxygen-independent coproporphyrinogen III oxidase Acid345_2367 2797074 - 2798153 + | L-threonine aldolase Acid345_2368 2798167 - 2798622 + | hypothetical protein Acid345_2369 2798753 - 2799895 + | acyl-CoA dehydrogenase-like Acid345_2370 2799972 - 2801222 + | beta-ketoacyl synthase TERM 2152 2801938 - 2801977 + G 75 -12.2 -3.27297 | gap 1, overlap 2801936 2801939 TATTCCGGCGGGCGG TGCGCGATGCCTATCGCAA GAT TCGCG-TAGCCATCGCGCG TATTAATTCGTACCT TERM 2153 2801939 - 2801976 + G 74 -13.5 -2.55896 | gap 1, overlap 2801938 2801936 ATTCCGGCGGGCGGT GCGCGATGCCTATCGCAA GAT TCGCG-TAGCCATCGCGC GTATTAATTCGTACC Acid345_2371 2801319 - 2803187 + | ABC transporter, ATPase subunit Acid345_2372 2804743 - 2803184 - | ankyrin TERM 2154 2805192 - 2805233 + H 100 -16 -4.6856 | opp_overlap 2805187 2805199, overlap 2805193 2805199 AACCATTCAAGTTTC CGAGAAACCCACCGCCAG TTAACC CTGGTGGTGGGTTTTTCA TTTTTGGAGTCTTTA TERM 2155 2805193 - 2805232 + H 100 -19.5 -3.40051 | opp_overlap 2805187 2805199, overlap 2805192 2805199 ACCATTCAAGTTTCC GAGAAACCCACCGCCAG TTAACC CTGGTGGTGGGTTTTTC ATTTTTGGAGTCTTT TERM 2156 2805226 - 2805199 - H 90 -12.7 -3.86822 | opp_overlap 2805199 2805193 2805192 CAAGTTTCCGAGAAA CCCACCGCCAG TTAACC CTGGTGGTGGG TTTTTCATTTTTGGA TERM 2157 2805199 - 2805226 + H 100 -14.9 -5.18355 | opp_overlap 2805199, overlap 2805193 2805192 CAAGTTTCCGAGAAA CCCACCGCCAG TTAACC CTGGTGGTGGG TTTTTCATTTTTGGA Acid345_2373 2805248 - 2806951 + | nitrite/sulfite reductase, hemoprotein beta-component, ferrodoxin-like TERM 2158 2807388 - 2807376 - g 72 -6.3 -4.2679 | CAACGGCTACGAAAA GAGTT CGA AACTC TGATCGACGGCACCT Acid345_2374 2806953 - 2807555 + | precorrin-2 dehydrogenase Acid345_2375 2807548 - 2808321 + | uroporphyrinogen-III C-methyltransferase Acid345_2376 2808365 - 2809537 + | hypothetical protein Acid345_2377 2809671 - 2810936 + | amidohydrolase TERM 2159 2810969 - 2810947 - T 100 -12.7 -4.9138 | opp_overlap 2810946 2810947 AGTAGTCAAACAAAA GGCCGACGC TCATC ACGTCGGCC CTTTCAGTCTTCCAA TERM 2160 2810947 - 2810969 + T 72 -12 -2.85503 | opp_overlap 2810947, overlap 2810946 AGTAGTCAAACAAAA GGCCGACG CTCATCA CGTCGGCC CTTTCAGTCTTCCAA Acid345_2378 2813701 - 2810993 - | Beta-glucosidase TERM 2161 2813437 - 2813457 + g 76 -13.3 -2.82516 | overlap 2813439 CCGCGCGGGCGACAC CGTGGAGCG CCT CGCTCCATG TCTGGTAATCAGGCA TERM 2162 2813439 - 2813455 + g 71 -12.3 -2.96216 | overlap 2813437 GCGCGGGCGACACCG TGGAGCG CCT CGCTCCA TGTCTGGTAATCAGG TERM 2163 2813656 - 2813638 - G 76 -12.4 -3.36327 | GGATGGGAGCCAGAA GCGCCTGC AAA GCAAGCGC CAACGCAAAGACCGC TERM 2164 2813871 - 2813852 - R 100 -15 -4.05788 | TCCGGGCAAACGAAA CCGGAGCC CTCA GGCTCCGG CTGGTGAAATCGCTA Acid345_2379 2814060 - 2813893 - | twin arginine-targeting protein translocase Acid345_2380 2815558 - 2814134 - | major facilitator transporter TERM 2165 2814996 - 2814979 - G 74 -8.3 -4.25104 | overlap 2814980 TGCTTGCCACCAAAA TGCCGGC CACT GCCGGCC CAACAATGCGTGCTC TERM 2166 2814995 - 2814980 - G 73 -11.8 -3.14848 | overlap 2814979 GCTTGCCACCAAAAT GCCGGC CACT GCCGGC CCAACAATGCGTGCT TERM 2167 2815444 - 2815418 - G 87 -7.3 -5.00616 | overlap 2815420 CTGTCCCGCAAAAAA GAGCTGAAAGT TTCGG ACCTTCAGCGC CGGCAGCCGATTCAG TERM 2168 2815442 - 2815420 - G 78 -8.5 -4.13561 | overlap 2815418 GTCCCGCAAAAAAGA GCTGAAAGT TTCGG ACCTTCAGC GCCGGCAGCCGATTC TERM 2169 2815740 - 2815762 + G 74 -11.2 -3.62046 | TCGACACGACCTTTA CGCCACCGGT ACA ACTGGCGGCG TTCTTGAGACCCTCG mgsA 2815603 - 2816073 + | methylglyoxal synthase Acid345_2382 2816070 - 2816492 + | hypothetical protein Acid345_2383 2817050 - 2816493 - | GCN5-related N-acetyltransferase TERM 2170 2817116 - 2817098 - H 71 -9.6 -3.53012 | opp_overlap 2817097 2817095 2817098 TTGGCCTCTGCTAAA TCTTCCGA CCT CCGGAAGA CTGTTATCCTAGAAA Acid345_2384 2817135 - 2819252 + | hypothetical protein Acid345_2385 2819267 - 2819752 + | hypothetical protein Acid345_2386 2820777 - 2819767 - | LacI family transcription regulator TERM 2171 2820813 - 2820755 - G 81 -14.9 -2.66656 | gap 4, opp_overlap 2820755 2820777, overlap 2820754 GACAGACCCAAATAG TCCGCAACGTCGCGCAGCCGC---ACAGG TTTCT CCTGTTTCGCGGCTGCT-GACGTTGCGGA TTGTGAAGTGCGCGA TERM 2172 2820755 - 2820813 + g 90 -17.1 -3.32844 | gap 4, opp_overlap 2820754 2820755, overlap 2820777 GACAGACCCAAATAG TCCGCAACGTCGCGCAGCCGC---ACAGG TTTCT CCTGTTTCGCGGCTGC-TGACGTTGCGGA TTGTGAAGTGCGCGA Acid345_2387 2822007 - 2820853 - | glycoside hydrolase family protein TERM 2173 2821964 - 2821932 - G 76 -7.1 -4.43844 | gap 1, opp_overlap 2821940 2821945, overlap 2821940 TGATGACGCACAAAA GCGAAAAA-GCAGC CGCAGC GCTGCGCTTTCCGC TCAACAGGAAAACTA TERM 2174 2821955 - 2821940 - G 86 -6.1 -4.89729 | opp_overlap 2821940 2821945, overlap 2821932 CACAAAAGCGAAAAA GCAGC CGCAGC GCTGC GCTTTCCGCTCAACA TERM 2175 2822080 - 2822043 - R 93 -11.9 -4.27617 | opp_overlap 2822045, overlap 2822045 GACATTGTACGAAAA GAGGGCCCCGGACGCCC CTGC AGACTTCCGGAGCCCTG TTGAGGACAGCTAGA TERM 2176 2822078 - 2822045 - R 95 -14.5 -3.73756 | opp_overlap 2822045, overlap 2822043 CATTGTACGAAAAGA GGGCCCCGGACGCCC CTGC AGACTTCCGGAGCCC TGTTGAGGACAGCTA Acid345_2388 2825579 - 2822091 - | Cna B-type protein TERM 2177 2826150 - 2826135 - g 71 -10.4 -3.53012 | TCGCCGGCGTCGAAA CCCTCG CGCG CGAGGG CAAACTCCGCACCCT TERM 2178 2826422 - 2826397 - g 79 -6.9 -4.56597 | gap 1, opp_overlap 2826404, overlap 2826401 CCCCTGCGCCAAAAA CGAGCAACAGCG CGA CGCCGTTA-TCG AGCACATCCTCAAAT Acid345_2389 2825771 - 2827525 + | DNA polymerase X family protein TERM 2179 2828196 - 2828169 - g 70 -4 -4.564 | opp_overlap 2828182, overlap 2828164 2828170 AAGTGGAAACCAAAA TTGCCCCCGGCA CCTC TGCGGAAGGCAG CGTTCTGGTCACGTT Acid345_2390 2827727 - 2828305 + | hypothetical protein TERM 2180 2828417 - 2828436 + T 100 -13.6 -4.25566 | opp_overlap 2828417 GACTCCCCAAAAAAA TCAGGGGC TTCA GCCCCTGA TTTTCACTGCTTCTT TERM 2181 2828436 - 2828417 - T 100 -13.6 -5.41143 | opp_overlap 2828417 GACTCCCCAAAAAAA TCAGGGGC TTCA GCCCCTGA TTTTCACTGCTTCTT TERM 2182 2828599 - 2828571 - T 100 -14.6 -5.33026 | opp_overlap 2828571 CAACTCAAACAAAAA GGCACGGAAGGA AGTAG CCCCTCCGTGCC TCTGTATCTCCGTAG TERM 2183 2828571 - 2828599 + T 76 -11.7 -3.05993 | opp_overlap 2828571 CAACTCAAACAAAAA GGCACGGAAGG AAGTAGC CCCTCCGTGCC TCTGTATCTCCGTAG Acid345_2391 2829484 - 2828630 - | hypothetical protein TERM 2184 2829825 - 2829804 - R 100 -11.5 -5.07652 | opp_overlap 2829803 2829804, overlap 2829805 CCCCGCAAAAGAAAA CGGCGCGAC CGAA GCCGCGCCA CTCTTCCGTTCTGTA TERM 2185 2829824 - 2829805 - R 86 -12.8 -3.63868 | opp_overlap 2829804 2829803, overlap 2829804 CCCGCAAAAGAAAAC GGCGCGAC CGAA GCCGCGCC ACTCTTCCGTTCTGT Acid345_2392 2831218 - 2829944 - | inositol-3-phosphate synthase TERM 2186 2831207 - 2831228 + g 71 -10.1 -3.59979 | TGCCACGGCGCCCAT GCCCGGCAT CATG ATGCCGAGC TTTCCAGTCGCCGGC Acid345_2393 2831302 - 2832336 + | short chain dehydrogenase Acid345_2394 2832394 - 2833458 + | NADH--flavin oxidoreductase/NADH oxidase Acid345_2395 2835742 - 2833532 - | TPR repeat-containing serine/threonin protein kinase TERM 2187 2836570 - 2836588 + G 76 -7.4 -4.46112 | CAAGCGGGGGAACTG CACCGATT TTC ACTCGGTG TTTATTTCGATGGCG TERM 2188 2836786 - 2836766 - g 70 -2.4 -4.81734 | AAAGACCAGCAAAAA CGCGACTA TTTCT TTGGCGCG CACGATGCGAACCGG Acid345_2396 2835983 - 2836969 + | transglutaminase-like TERM 2189 2837033 - 2837045 + T 89 -3.4 -5.49729 | opp_overlap 2837033 AACCCGAAGTTATAA GTTG GTTAA CAAC TTTTTTTAAGTGCTT Acid345_2397 2838093 - 2837239 - | short-chain dehydrogenase/reductase SDR TERM 2190 2839352 - 2839339 - g 83 -5.2 -5.00884 | ACGTGGTGGAAAAAA CGCG GCTCAA CGCG CAAATGAAATTCACG Acid345_2398 2838735 - 2840255 + | periplasmic sensor diguanylate phophodiesterase Acid345_2399 2843683 - 2840288 - | multi-sensor signal transduction histidine kinase TERM 2191 2840965 - 2841003 + g 81 -15.3 -2.64616 | opp_overlap 2840977 2840978, overlap 2840978 CGGACGCGAGCTTTT CACTGCGCAGAAGCGCG TCCTC CGCGTTTTTGCGCGGGG TGATGTCCGTAGCCG TERM 2192 2840978 - 2840990 + g 78 -6.2 -4.57073 | opp_overlap 2840977 2840978, overlap 2840965 TTCACTGCGCAGAAG CGCG TCCTC CGCG TTTTTGCGCGGGGTG Acid345_2400 2844000 - 2843713 - | hypothetical protein Acid345_2401 2844896 - 2844057 - | gas vesicle synthesis GvpLGvpF Acid345_2402 2845368 - 2844967 - | response regulator receiver protein Acid345_2403 2847478 - 2845379 - | PAS/PAC sensor signal transduction histidine kinase Acid345_2404 2847802 - 2847506 - | gas vesicle protein GVPa Acid345_2405 2848186 - 2847827 - | gas vesicle protein GVPa Acid345_2406 2848874 - 2848512 - | gas vesicle K Acid345_2407 2849527 - 2848871 - | gas vesicle synthesis GvpLGvpF TERM 2193 2849127 - 2849169 + g 77 -7.7 -4.26076 | gap 1, overlap 2849134 2849135 AGGGCCTTCCGCGCT TCGAGGT-ACTCCCTACCCG ACTC CGGGTCGGGAGGGAGCTTGA TTTTGCTGACGATCC TERM 2194 2849134 - 2849165 + g 78 -11.6 -3.71672 | gap 1, overlap 2849127 2849135 TCCGCGCTTCGAGGT ACTCCCTACCCGACT CCG GGTCGGG-AGGGAGC TTGATTTTGCTGACG TERM 2195 2849135 - 2849164 + g 83 -15.1 -2.82521 | gap 1, overlap 2849134 2849127 CCGCGCTTCGAGGTA CTCCCTACCCGACT CCG GGTCGGG-AGGGAG CTTGATTTTGCTGAC Acid345_2408 2849790 - 2849533 - | gas vesicle protein GVPa Acid345_2409 2850562 - 2849783 - | gas vesicle synthesis GvpLGvpF Acid345_2410 2852451 - 2850547 - | arsenite-transporting ATPase Acid345_2411 2853982 - 2852489 - | PAS/PAC sensor hybrid histidine kinase TERM 2196 2852545 - 2852528 - G 73 -11.3 -3.43217 | CAGGAAGATGGAGAA GCAGGTC CCGT GACCTGC GCCAGATTGCGACGA Acid345_2412 2855794 - 2853983 - | histidine kinase TERM 2197 2855394 - 2855413 + g 80 -9.2 -4.13014 | opp_overlap 2855388 GCTGATAATCGCTTC GACACGCG TACC CGCGTGCC TTTTCCCGGTGTGGA Acid345_2413 2856825 - 2855797 - | anti-sigma regulatory factor, serine/threonine protein kinase and phosphatase Acid345_2414 2857220 - 2856816 - | putative anti-sigma regulatory factor, serine/threonine protein kinase Acid345_2415 2857652 - 2857224 - | anti-sigma-factor antagonist Acid345_2416 2858528 - 2857662 - | anti-sigma-factor antagonist Acid345_2417 2859734 - 2858670 - | hypothetical protein Acid345_2418 2859847 - 2860359 + | hypothetical protein TERM 2198 2860939 - 2860929 - g 86 -5.4 -5.03314 | overlap 2860931 GCTACGCGCAAAAAA CTCT CGC AGAG GCGATCAGCTTCTGG Acid345_2419 2860433 - 2861350 + | abortive infection protein TERM 2199 2861528 - 2861511 - T 71 -6.3 -4.28067 | CTAACAACAGATAAA TCGCAGT CCCA ACTACGA GCGCACCGGTCAACC Acid345_2420 2862144 - 2861653 - | hypothetical protein Acid345_2421 2862578 - 2862141 - | DGPFAETKE domain-containing protein Acid345_2422 2863563 - 2862790 - | hypothetical protein Acid345_2423 2863907 - 2863623 - | hypothetical protein Acid345_2424 2864867 - 2863965 - | 5'-3' exonuclease Acid345_2425 2865714 - 2864920 - | hypothetical protein Acid345_2426 2867123 - 2865831 - | HipA-like protein TERM 2200 2866521 - 2866544 + g 73 -11 -3.32844 | opp_overlap 2866519 TTTCAGCAGCCAATG TTCGAAGCCG GGAG CGGCATCGAA TTGTCCGCTGCGCAC Acid345_2427 2867443 - 2867120 - | XRE family transcriptional regulator Acid345_2428 2868780 - 2868175 - | hypothetical protein Acid345_2429 2869905 - 2869258 - | hypothetical protein Acid345_2430 2870400 - 2869948 - | antibiotic biosynthesis monooxygenase Acid345_2431 2871535 - 2870504 - | GHMP kinase TERM 2201 2871410 - 2871422 + g 76 -4.7 -4.82901 | ATTGACCCCAAAATT CACCG TGA CGGAG TTTTTATGAAAAAGG Acid345_2432 2872607 - 2871585 - | hypothetical protein Acid345_2433 2872756 - 2875020 + | TonB-dependent receptor Acid345_2434 2875114 - 2875407 + | hypothetical protein TERM 2202 2877261 - 2877242 - g 75 -8.5 -4.08692 | overlap 2877245 TAAGCGTGCCGAAAA GACCGGC GGCGAT GCCGGCC GCAGCGTGCGCGAGC Acid345_2435 2875494 - 2877488 + | oligopeptide transporter, OPT Acid345_2436 2877488 - 2878843 + | hypothetical protein Acid345_2437 2878903 - 2879595 + | cyclic nucleotide-binding protein Acid345_2438 2879888 - 2883643 + | peptidase S8 and S53, subtilisin, kexin, sedolisin TERM 2203 2883662 - 2883684 + T 100 -14.8 -5.32882 | opp_overlap 2883662 2883658 GTTGCATCTAACCGA CGCGCTCGCG AAA TGCGGGCGCG TTTTTTGTGCTACTG TERM 2204 2883684 - 2883662 - T 71 -11.9 -2.54896 | opp_overlap 2883662, overlap 2883658 GTTGCATCTAACCGA CGCGCTCGC GAAAT GCGGGCGCG TTTTTTGTGCTACTG Acid345_2439 2885048 - 2883702 - | TPR repeat-containing protein TERM 2205 2884478 - 2884490 + g 72 -9.1 -3.87815 | opp_overlap 2884478 TCTCCAGATACGGAA GCGCA TCC TGCGC TTTCTGCGCGTGCAG Acid345_2440 2885546 - 2885157 - | hypothetical protein Acid345_2441 2885883 - 2885578 - | hypothetical protein Acid345_2442 2886164 - 2889256 + | periplasmic sensor signal transduction histidine kinase Acid345_2443 2889240 - 2889887 + | two component LuxR family transcriptional regulator Acid345_2444 2889957 - 2890322 + | hypothetical protein Acid345_2445 2890459 - 2891139 + | two component LuxR family transcriptional regulator TERM 2206 2891337 - 2891319 - f 100 -14.6 -3.82208 | opp_overlap 2891319 CACCAAAGATCGAAA GGCAGCCA AGA TGGCTGCC TTTTTTGTTTGTGCC TERM 2207 2891319 - 2891337 + F 100 -14.6 -5.72622 | opp_overlap 2891319 CACCAAAGATCGAAA GGCAGCCA AGA TGGCTGCC TTTTTTGTTTGTGCC Acid345_2446 2891676 - 2892665 + | ThiJ/PfpI family protein Acid345_2447 2894080 - 2893049 - | transposase IS116/IS110/IS902 Acid345_2448 2894788 - 2894228 - | hypothetical protein TERM 2208 2894280 - 2894296 + g 74 -6.5 -4.55295 | overlap 2894272 2894275 GGATGAGTGCTCGCA GCGTGAT TGC GTCGCGC TTTGTTTCTGGCAGC TERM 2209 2894939 - 2894922 - H 71 -9.9 -3.53224 | CACCGTCGTTCGAAA TCCAGAC AGTT GTCTGGA ATCTCGACCGCGACA Acid345_2449 2895113 - 2896009 + | hypothetical protein TERM 2210 2896053 - 2896025 - T 100 -14.6 -4.56775 | opp_overlap 2896029, overlap 2896029 AGCCTTCTGCAAAAA CAAAGGGCGCCC GATTT GAGCGCCCTTCG TGCTGAGTTGCCGCC TERM 2211 2896049 - 2896029 - T 100 -11.8 -4.85782 | opp_overlap 2896029, overlap 2896025 TTCTGCAAAAACAAA GGGCGCCC GATTT GAGCGCCC TTCGTGCTGAGTTGC TERM 2212 2896029 - 2896049 + T 71 -10.3 -3.2327 | opp_overlap 2896029 2896025 TTCTGCAAAAACAAA GGGCGCCCG ATT TGAGCGCCC TTCGTGCTGAGTTGC Acid345_2450 2900931 - 2896072 - | APHP TERM 2213 2900109 - 2900125 + g 83 -13.7 -3.4072 | overlap 2900094 GGGTGTCGCTCTTGC CGCCCTG TTT CAGGGCG TTGTAGTACACGGTC Acid345_2451 2901107 - 2901886 + | GCN5-related N-acetyltransferase Acid345_2452 2901844 - 2902197 + | hypothetical protein Acid345_2453 2902207 - 2902707 + | phage tail Collar TERM 2214 2902783 - 2902799 + G 74 -6.5 -4.4891 | TCAGTTTCAACTTCG CGCCGAA AGG TTGGGCG TTTTGTAATGGTCAA Acid345_2454 2902734 - 2903231 + | phage tail Collar Acid345_2455 2903254 - 2903784 + | phage tail Collar Acid345_2456 2903821 - 2904267 + | hypothetical protein TERM 2215 2904292 - 2904309 + F 100 -12.7 -4.4891 | opp_overlap 2904292 ACTCATTCATCGAAA GGCAGCC TACG GGCTGCC TTTTGTAATGATAGA TERM 2216 2904309 - 2904292 - f 86 -12.7 -3.66999 | opp_overlap 2904292 ACTCATTCATCGAAA GGCAGCC TACG GGCTGCC TTTTGTAATGATAGA TERM 2217 2904355 - 2904343 - f 70 -6.9 -4.21954 | opp_overlap 2904345 2904346, overlap 2904344 TGAAGAGAGAAACAA CCGCG AGG CGCGA GCCTCGATTGTTTGT TERM 2218 2904345 - 2904362 + F 70 -6.9 -4.11183 | opp_overlap 2904344 2904343, overlap 2904346 AAGAGAGAAACAACC GCGAGGC GCGA GCCTCGA TTGTTTGTGCTCGGC TERM 2219 2904570 - 2904587 + F 100 -6.9 -5.60993 | opp_overlap 2904568 2904570 2904571, overlap 2904571 TGTGAGAGAAATAGA GCGAGGC GCGA GCCTCGA TTTTTTTGTGCGCGA TERM 2220 2904571 - 2904586 + F 83 -10.4 -3.95873 | opp_overlap 2904570 2904568 2904571, overlap 2904570 GTGAGAGAAATAGAG CGAGGC GCGA GCCTCG ATTTTTTTGTGCGCG Acid345_2457 2904716 - 2905246 + | hypothetical protein TERM 2221 2905403 - 2905376 - T 70 -9.8 -3.37283 | opp_overlap 2905380, overlap 2905374 2905378 2905380 TAAATTTTGGAAAGA GAGACGGGAGCC ATTG GGCTCCCGTTTT GTTTGGAGAAAAGAT TERM 2222 2905401 - 2905378 - T 78 -12.4 -3.24976 | opp_overlap 2905380, overlap 2905376 2905374 2905380 AATTTTGGAAAGAGA GACGGGAGCC ATTG GGCTCCCGTT TTGTTTGGAGAAAAG TERM 2223 2905380 - 2905399 + T 100 -15 -4.86731 | opp_overlap 2905380 2905378 2905376 2905374 TTTTGGAAAGAGAGA CGGGAGCC ATTG GGCTCCCG TTTTGTTTGGAGAAA TERM 2224 2905399 - 2905380 - T 95 -15 -3.18571 | opp_overlap 2905380, overlap 2905378 2905376 2905374 TTTTGGAAAGAGAGA CGGGAGCC ATTG GGCTCCCG TTTTGTTTGGAGAAA Acid345_2458 2906943 - 2905426 - | glycine dehydrogenase subunit 2 TERM 2225 2905700 - 2905715 + g 70 -4.6 -4.45664 | opp_overlap 2905696, overlap 2905701 2905702 TAATCGATCAAGCGC TTGGCG ATGT CGCCGG TTTTGATTCCCTTCC Acid345_2459 2908271 - 2906940 - | glycine dehydrogenase subunit 1 TERM 2226 2908363 - 2908377 + r 72 -11.4 -3.06183 | GGGTCCTTCGACTAC GCGTGC TGC GCACGC TTCGCTCAGGATGAC Acid345_2460 2908797 - 2908417 - | glycine cleavage system H protein Acid345_2461 2910060 - 2908918 - | glycine cleavage system aminomethyltransferase T TERM 2227 2909185 - 2909199 + g 73 -2.8 -4.82901 | opp_overlap 2909169, overlap 2909169 GAGTGCGCGCTTCAC GCCA TCGTTCT TGGC TTTTTCTAGGGCGGC Acid345_2462 2910166 - 2910672 + | response regulator receiver protein Acid345_2463 2912238 - 2910997 - | hypothetical protein TERM 2228 2912298 - 2912311 + r 76 -9.5 -3.81146 | GGAAATTTTTGGGCA GGGGC TAAA GCCCC TTCTTACTTGAGGAG TERM 2229 2912453 - 2912422 - R 100 -17.4 -4.7497 | gap 1 TTCACCGATCAAAAA GCTGGCCCAGC-CGA TGC TCAAGCTGGGCCAGC CACTCGGGGATTGGG Acid345_2464 2913151 - 2912474 - | hypothetical protein Acid345_2465 2913938 - 2913294 - | bifunctional deaminase-reductase-like TERM 2230 2913840 - 2913825 - G 72 -4.6 -4.56775 | overlap 2913829 ATCGGTGGGGAAAAA CCATGC GAAG GCTTGG GGCATGCCGACGCCT Acid345_2466 2916455 - 2914278 - | glutamate carboxypeptidase II Acid345_2467 2917557 - 2916583 - | patatin TERM 2231 2917689 - 2917652 - H 86 -10.6 -4.07568 | gap 1, opp_overlap 2917684, overlap 2917653 2917681 2917684 CTGCTTTGGTCAAAA TCCCCA-CCCTATCGCG GGATG CGCGACAAGGATGGGGC ACCCATAGTTTCGTA TERM 2232 2917688 - 2917653 - H 91 -14.1 -3.04398 | gap 1, opp_overlap 2917684, overlap 2917652 2917681 2917684 TGCTTTGGTCAAAAT CCCCA-CCCTATCGCG GGATG CGCGACAAGGATGGGG CACCCATAGTTTCGT Acid345_2468 2917766 - 2918284 + | NUDIX hydrolase TERM 2233 2918486 - 2918497 + F 86 -7.2 -4.69214 | CAACCCCACATCTAT CGGC GTGC GCCG TTTGTTTGTTCCCTG TERM 2234 2918718 - 2918738 + G 71 -12.5 -2.53641 | overlap 2918717 GTTGCGGTTCTAGGC GCGGGGACC ATG GGTGCCCGC ATTGCTGCTCACTTC Acid345_2469 2918682 - 2921102 + | 3-hydroxyacyl-CoA dehydrogenase Acid345_2470 2921106 - 2922281 + | 3-ketoacyl-CoA thiolase TERM 2235 2923093 - 2923073 - g 72 -9.7 -3.65812 | opp_overlap 2923058 2923076, overlap 2923076 GGGCGCGGAAGAGAA GAAGCTCGG GAT CCGAGGTTC GTCGACCGCGCCGCT Acid345_2471 2922396 - 2924189 + | butyryl-CoA dehydrogenase TERM 2236 2924210 - 2924235 + F 100 -11.9 -5.5112 | opp_overlap 2924209 2924214, overlap 2924211 2924214 TGCCTCTCCCAGAAC GTAAGGGCGGA TACT TCCGCCCTTAA TTTTTTGTTACTGGC TERM 2237 2924211 - 2924234 + F 100 -15.4 -3.89587 | opp_overlap 2924209 2924214, overlap 2924210 2924214 GCCTCTCCCAGAACG TAAGGGCGGA TACT TCCGCCCTTA ATTTTTTGTTACTGG TERM 2238 2924231 - 2924214 - f 83 -12.7 -3.23274 | opp_overlap 2924211 2924210 2924214, overlap 2924209 TCTCCCAGAACGTAA GGGCGGA TACT TCCGCCC TTAATTTTTTGTTAC TERM 2239 2924214 - 2924231 + F 93 -12.7 -4.04157 | opp_overlap 2924214 2924209, overlap 2924211 2924210 TCTCCCAGAACGTAA GGGCGGA TACT TCCGCCC TTAATTTTTTGTTAC Acid345_2472 2924349 - 2924609 + | hypothetical protein TERM 2240 2924649 - 2924633 - T 73 -10.8 -3.41366 | opp_overlap 2924633, overlap 2924631 2924629 TCATCGCAAAAGACA GGGCGC GTGCA GCGCCC TTTTTTCATTTTAGC TERM 2241 2924633 - 2924649 + T 100 -10.8 -5.46698 | opp_overlap 2924633 2924631 2924629 TCATCGCAAAAGACA GGGCGC GTGCA GCGCCC TTTTTTCATTTTAGC Acid345_2473 2925328 - 2924660 - | protein-L-isoaspartate O-methyltransferase TERM 2242 2924731 - 2924743 + g 72 -9.1 -3.90744 | overlap 2924732 CGAGTTTCGTGCGCT GCAGG CGG CCTGC TTGTTTGCGGACCAC Acid345_2474 2929462 - 2925353 - | hypothetical protein TERM 2243 2928298 - 2928308 + g 71 -6.8 -4.25104 | overlap 2928258 TGTGCAACTCGAACT TGCC GTC GGCA TTTTGCTCGACGGCC Acid345_2475 2930163 - 2929459 - | hypothetical protein Acid345_2476 2933171 - 2930163 - | surface antigen (D15) TERM 2244 2934126 - 2934136 + G 72 -4.6 -4.56775 | opp_overlap 2934126 TACGCCACAACGAAT TCGC GCT GCGG TTTTTCCACGAACCT Acid345_2477 2933234 - 2934250 + | UBA/THIF-type NAD/FAD binding protein TERM 2245 2934377 - 2934354 - f 85 -6.6 -4.88228 | opp_overlap 2934357 2934358, overlap 2934355 2934357 ACGGAACAGGAAAAA CGACCGGACC ATCA GGTTCGGTCC GGAGTAGAACCTATG TERM 2246 2934376 - 2934355 - f 71 -10.1 -3.51853 | opp_overlap 2934357 2934358, overlap 2934354 2934357 CGGAACAGGAAAAAC GACCGGACC ATCA GGTTCGGTC CGGAGTAGAACCTAT Acid345_2478 2934390 - 2935148 + | hypothetical protein TERM 2247 2935194 - 2935215 + F 100 -13.7 -4.66833 | opp_overlap 2935181 GACGGAACAGTGAGA GGCGAGGCC ACGC GGCTTCGCC TTTTTAACGTTCCAA Acid345_2479 2935311 - 2935925 + | response regulator receiver protein TERM 2248 2936209 - 2936220 + G 72 -5.8 -4.52857 | AACATGAAGCCTCAG GTCG GCAC CGAC TTTTGTATGCACGCT Acid345_2480 2936059 - 2936436 + | hypothetical protein Acid345_2481 2936439 - 2936966 + | bifunctional deaminase-reductase-like Acid345_2482 2937133 - 2937444 + | hypothetical protein Acid345_2483 2937537 - 2937899 + | response regulator receiver protein TERM 2249 2937925 - 2937907 - f 100 -8.8 -5.45652 | opp_overlap 2937907 2937906 AGCCCTAACAAAAAA CCCCGC TGGTTGT GCGGGG CTTTTCCTACATCAG TERM 2250 2938014 - 2938027 + F 71 -5.9 -4.24891 | AAAACGTTATCCGAT CCCGG CGTA CTGGG TGTTTTTTCGTCTAT TERM 2251 2938415 - 2938441 + G 71 -10.8 -3.54459 | CGCATTGGCTGCAAT CCGCAGCTCCGA CCG TCGCGGTTGCGG TTTCGAAGCCATTCG Acid345_2484 2938081 - 2939478 + | major facilitator transporter Acid345_2485 2940260 - 2939487 - | hypothetical protein Acid345_2486 2940528 - 2941136 + | ECF subfamily RNA polymerase sigma-24 factor Acid345_2487 2941233 - 2941481 + | hypothetical protein TERM 2252 2941489 - 2941514 + F 100 -16.9 -3.1996 | GTTTCTAAATTTCCG GTCGCGGCGTT GCTC GACGCCGCGAC TTCCCTTCCCATTTG TERM 2253 2941722 - 2941752 + G 81 -8.9 -4.29106 | gap 1, opp_overlap 2941712 GAAAAGCACGGTTGG CGCACGCCTC-GCC GAAA GGCTGGGGTGGGCG TTTGTTGATCTCGAC Acid345_2488 2941696 - 2942202 + | shikimate kinase TERM 2254 2942678 - 2942692 + G 75 -8.6 -3.9461 | CTGCCTCCTTCCACC GTCATC CTC GATGAC TTCTTCTTCACCCAC Acid345_2489 2942237 - 2942998 + | hypothetical protein Acid345_2490 2943057 - 2944112 + | aspartate-semialdehyde dehydrogenase Acid345_2491 2944126 - 2945496 + | aspartate kinase III TERM 2255 2945604 - 2945594 - g 78 -8.2 -4.42238 | TGATGGCAAGGAAAA CGCC GGC GGCG CTGCAATTACACCTG Acid345_2492 2945493 - 2946173 + | dihydrodipicolinate reductase Acid345_2493 2946176 - 2947078 + | dihydrodipicolinate synthase TERM 2256 2947332 - 2947342 + G 90 -4.6 -5.4505 | CGTAATTTTCTCTAC GCTG TCG CGGC TTTTTTGTTCGGGGG Acid345_2494 2947083 - 2948774 + | O-antigen polymerase TERM 2257 2949741 - 2949697 - g 70 -4.2 -4.63184 | gap 1, opp_overlap 2949711 2949712, overlap 2949698 2949701 AAGTCAGCGGAAAAA CCATGGGCGGCAACTGCGCCA AGAG TGGCGCCTTTACCGCG-ACGA TCGAATAGCGAAACT Acid345_2495 2948907 - 2949749 + | hypothetical protein TERM 2258 2949771 - 2949790 + T 100 -15 -4.26188 | opp_overlap 2949765 TGAAACTCAGACCGA GCGGAGCC TGCG GGCTCCGC TTTTGCATATATGAA TERM 2259 2949830 - 2949809 - T 100 -11.6 -4.84527 | TGCATATATGAAAAA TGCCCCTC TGGCTG GAGGGGCA TGGGAAAGGAGAGAG Acid345_2496 2950400 - 2949876 - | ECF subfamily RNA polymerase sigma-24 factor TERM 2260 2950404 - 2950418 + r 76 -2.7 -4.99972 | TGTGCTCGCCATTCT GCCCC CTTTT GGGTC TTTTTGGTCTTTTGT Acid345_2497 2954246 - 2950740 - | multi-sensor hybrid histidine kinase TERM 2261 2951690 - 2951707 + g 88 -10.5 -4.55697 | opp_overlap 2951690 GCAAATTCTGAACCA CGCGGCG AGTG CGCTGCG TTTGTTTGTAGAGCT TERM 2262 2954150 - 2954168 + g 78 -11 -3.72893 | opp_overlap 2954150 CAGTCGCCGCAAGCA GGACCAGG ACA TCTGGTCC TTTGGTCAACACATC Acid345_2498 2954354 - 2955457 + | response regulator receiver modulated metal dependent phosphohydrolase Acid345_2499 2956617 - 2955460 - | cystathionine gamma-lyase TERM 2263 2956401 - 2956426 + g 70 -2.3 -4.82901 | opp_overlap 2956404 CAAAGACCTTGGAAT CTACGCCGCCC TCAA GCGCAGCGAGG TTTTTCTCCAACCGA Acid345_2500 2957603 - 2956656 - | cystathionine beta-synthase (acetylserine-dependent) TERM 2264 2957640 - 2957612 - R 100 -7.3 -5.20333 | TATTCATAAGAAAAA GGCCAACCCTTCA GGC TATCGGGTCGGCC GCCGAATGGTCAACG Acid345_2501 2958162 - 2957674 - | hypothetical protein TERM 2265 2959118 - 2959087 - g 90 -12.4 -4.17048 | overlap 2959091 GCGTTCGTAAAAGAA GAAACCGAGAGG TGGCGTAC CCTCTCGGCTTC AACGGACTTCGTTTG TERM 2266 2959114 - 2959091 - g 87 -9.6 -4.67697 | overlap 2959087 TCGTAAAAGAAGAAA CCGAGAGG TGGCGTAC CCTCTCGG CTTCAACGGACTTCG Acid345_2502 2958295 - 2959134 + | short-chain dehydrogenase/reductase SDR Acid345_2503 2960274 - 2959135 - | hypothetical protein TERM 2267 2959959 - 2959982 + g 80 -10.4 -4.0896 | CGAAGTTTTCCTGGT TGATGGTGAT CATC ATCGCCATCA TTTTGCGCGCGGTTT Acid345_2504 2961514 - 2960366 - | hypothetical protein TERM 2268 2961561 - 2961528 - R 100 -18.3 -3.5393 | gap 1, opp_overlap 2961528, overlap 2961535 2961546 ATCATCCCCCTTAAA CACGAAAGCCCCGCTA AAG TAGCGGGGCTT-CGCG TTGCTTGAGTCTTAT TERM 2269 2961528 - 2961561 + r 100 -16.1 -3.41002 | gap 1, opp_overlap 2961528 2961535 2961546 ATCATCCCCCTTAAA CACGAAAGCCCCGCTA AAG TAGCGGGGCTT-CGCG TTGCTTGAGTCTTAT TERM 2270 2961555 - 2961535 - R 100 -16.9 -4.00532 | opp_overlap 2961528, overlap 2961528 2961546 CCCTTAAACACGAAA GCCCCGCTA AAG TAGCGGGGC TTCGCGTTGCTTGAG Acid345_2505 2962865 - 2961573 - | von Willebrand factor, type A TERM 2271 2962189 - 2962168 - GR 71 -8.1 -3.88232 | gap 1 TGGTCGAGATAATAA TCGTCGTTGA AGT TCA-CGACGA ACACCTCGTCCTCTG Acid345_2506 2963913 - 2962825 - | von Willebrand factor, type A Acid345_2507 2964342 - 2965817 + | cell wall hydrolase/autolysin Acid345_2508 2965814 - 2966407 + | hypothetical protein Acid345_2509 2966404 - 2967279 + | glutamate racemase Acid345_2510 2967693 - 2967298 - | hypothetical protein Acid345_2511 2967954 - 2967715 - | 4-oxalocrotonate tautomerase Acid345_2512 2968952 - 2967966 - | aldo/keto reductase Acid345_2513 2970546 - 2969560 - | hypothetical protein TERM 2272 2970038 - 2970006 - G 72 -9.8 -3.64703 | opp_overlap 2970010 CGCCGTCTACGTAAA TCAGCGAGTACGGC GAACT GCCGCTCTCGTTGA TGGCATAGCCCACGT TERM 2273 2970993 - 2970975 - g 72 -4.5 -4.56597 | overlap 2970976 CGCCGGGCGTAAAAA TCGCGAA CGCGC TTCGCGC GCAGCCCCAGCTAAC TERM 2274 2971136 - 2971125 - g 78 -3.6 -5.02476 | AGATTCGCGAAAAAA CGGC TAAC GCCA CTGCCGCCGTCAAAG Acid345_2514 2970944 - 2971390 + | helix-hairpin-helix protein TERM 2275 2971414 - 2971431 + F 100 -10.5 -5.35224 | opp_overlap 2971412 CCCGCGCCAATGATC GCCCGGT TAAC GCCGGGC TTTTCTTTTTCTACG Acid345_2515 2971602 - 2972048 + | putative anti-sigma regulatory factor, serine/threonine protein kinase TERM 2276 2972315 - 2972299 - g 71 -10.9 -3.18681 | opp_overlap 2972302, overlap 2972302 GCTCAATCTGACCAA GAAGGTC CAT GACCTTC TCCAGATCACCAAGC Acid345_2516 2972045 - 2972389 + | anti-sigma-factor antagonist TERM 2277 2972414 - 2972438 + F 100 -12.8 -4.56978 | opp_overlap 2972411 2972414, overlap 2972425 CGTGGGAGCAAATTA GCCTCGCGGT CGAAA GCCGCGGGGC TTTCTTGTTTAGCGG TERM 2278 2972425 - 2972442 + F 76 -9.9 -3.91716 | opp_overlap 2972414 2972411, overlap 2972414 ATTAGCCTCGCGGTC GAAAGCC GCGG GGCTTTC TTGTTTAGCGGGTAC Acid345_2517 2972506 - 2973252 + | hypothetical protein Acid345_2518 2973481 - 2974134 + | hypothetical protein Acid345_2519 2974203 - 2975951 + | alpha amylase Acid345_2520 2976997 - 2975999 - | hypothetical protein TERM 2279 2976294 - 2976304 + g 71 -8.2 -4.0616 | GCCTGCGGATTCATC GGCG CCA CGCC TTTGTCGTTCGAGTC TERM 2280 2977683 - 2977709 + G 72 -8.7 -3.89346 | gap 1 CGCAGAAACTCGGAA TGCCGGTGGTCG CCGT CG-CCACGGGCA TTTATCCAATCGAGC Acid345_2521 2977079 - 2977780 + | HAD family hydrolase Acid345_2522 2977784 - 2979643 + | TPR repeat-containing protein TERM 2281 2979663 - 2979681 + T 88 -13.8 -3.45366 | opp_overlap 2979663 CTATCAAATCAAAAA GCCCGCCG TGT TGGCGGGC TTAATTCATTCCAGC TERM 2282 2979681 - 2979663 - T 100 -13.1 -5.01811 | opp_overlap 2979663 CTATCAAATCAAAAA GCCCGCC GTGTT GGCGGGC TTAATTCATTCCAGC Acid345_2523 2980546 - 2979701 - | DSBA oxidoreductase TERM 2283 2980504 - 2980494 - G 71 -8.2 -4.07568 | overlap 2980495 TTGCTCTGGGCAAAA GCCG CGG CGGC GAACACAAGGGTGGC Acid345_2524 2982230 - 2980560 - | NH(3)-dependent NAD(+) synthetase TERM 2284 2981656 - 2981646 - G 74 -8.2 -4.18018 | TTTGGCCACGTAAAA CGGC GAC GCCG AAATATTCAGCAATA TERM 2285 2981995 - 2981962 - G 77 -10.3 -3.90112 | gap 1 GCCGGCGTAACCAAA CCGGCGACGACGGTGA TCC CCACCGTCATC-CGGG CAATGGCTTCGGCAA Acid345_2525 2982427 - 2982798 + | response regulator receiver protein TERM 2286 2983219 - 2983245 + G 74 -13.8 -2.52834 | opp_overlap 2983226, overlap 2983218 CCTCTCGCGCCCGGG CTCAAGACCGTC GAA GACGCTCTTGAG ATTCGTCGTCGCGTG Acid345_2526 2982844 - 2984178 + | NADH dehydrogenase TERM 2287 2984207 - 2984189 - T 100 -12.4 -4.84918 | opp_overlap 2984189 CTTAGAAATAGAAAA GCCCCGAA TCG CTCGGGGC TTTCTTCTGCGCAAT TERM 2288 2984189 - 2984207 + T 93 -11.7 -4.30987 | opp_overlap 2984189 CTTAGAAATAGAAAA GCCCCGA ATCGC TCGGGGC TTTCTTCTGCGCAAT Acid345_2527 2984649 - 2984233 - | hypothetical protein TERM 2289 2986372 - 2986355 - g 78 -9.8 -4.05848 | AAGCATAGAATCAAA GGCGGG TCAGGC CCCGCC ATCCGGCAGCACGCC Acid345_2528 2984787 - 2986394 + | TPR repeat-containing protein Acid345_2529 2986411 - 2987727 + | nodulation efficiency protein NfeD Acid345_2530 2987851 - 2988624 + | SPFH domain-containing protein/band 7 family protein Acid345_2531 2988649 - 2989248 + | sporulation related protein TERM 2290 2989264 - 2989289 + F 78 -11.9 -3.21099 | opp_overlap 2989269, overlap 2989269 TCGGTTTTCGTTTCG GGAAAGCGTGC TGCG GCGCGCTTTTC TTCATGCTGCAACGC TERM 2291 2989269 - 2989284 + F 90 -8.2 -4.73613 | opp_overlap 2989269, overlap 2989264 TTTCGTTTCGGGAAA GCGTGC TGCG GCGCGC TTTTCTTCATGCTGC Acid345_2532 2989271 - 2989639 + | ArsR family transcriptional regulator TERM 2292 2989745 - 2989732 - T 72 -3.7 -4.72631 | opp_overlap 2989732, overlap 2989722 2989733 AGCAACCGAAGAAAA TCGGC TTCA GCCGC TGCTTCGCCCTCGTC Acid345_2533 2993022 - 2989891 - | hypothetical protein TERM 2293 2990597 - 2990614 + g 71 -6.9 -4.18908 | TCCGGCCACTCTTGC GGCTGCT CGTT GGCGGCC TTCTTTTCGCGGTCT TERM 2294 2991020 - 2990994 - G 82 -10.8 -4.17417 | opp_overlap 2990994, overlap 2990995 TGAACGACACATAAA CGCCCTTCTCCG TTC CGGCGAAGAGCA GTCCCTTGCGCACCG TERM 2295 2991019 - 2990995 - G 73 -12.1 -3.09727 | opp_overlap 2990994, overlap 2990994 GAACGACACATAAAC GCCCTTCTCCG TTC CGGCGAAGAGC AGTCCCTTGCGCACC TERM 2296 2991215 - 2991190 - G 72 -9.8 -3.72576 | gap 1, overlap 2991172 CGTCCCCGCATCAAA CGGTGACGCCT CCACC AGGC-TCACCG TGCTCCACTCCGGCA TERM 2297 2992867 - 2992846 - G 82 -8.7 -4.55128 | gap 1 AGCGCCAAAGTAAAA CGTCGCCGGA TCC CCCGGC-ACG CCCGTCACGGCCAGC TERM 2298 2993143 - 2993122 - H 71 -10.1 -3.55563 | overlap 2993123 AGCGGATTTGTGAAA GGGCACGAC TTTA GTCGTGCCG AAAGTGCCGAAAAGG TERM 2299 2993142 - 2993123 - H 79 -13.6 -2.73124 | overlap 2993122 GCGGATTTGTGAAAG GGCACGAC TTTA GTCGTGCC GAAAGTGCCGAAAAG TERM 2300 2993723 - 2993691 - g 75 -4.2 -4.87133 | gap 1, overlap 2993693 2993694 AGCTTGCAAAGAAAA CACCGATCATCGTCG AGGC CGA-GCTGATCGATA CGGAGACAACTGCGG Acid345_2534 2993264 - 2994106 + | hypothetical protein TERM 2301 2994540 - 2994520 - g 78 -4 -5.00616 | gap 2, overlap 2994522 TGGGCGGTGAAAAAA TG-CGC-GCC GCC GGCTGCGACA TCATCGTGGACTCCA Acid345_2535 2994396 - 2995544 + | lipid-A-disaccharide synthase TERM 2302 2995668 - 2995653 - f 73 -6 -4.46514 | overlap 2995654 ACGGAGGGAAAGAAA TGGGGC TTTA GCCCCT GCGATTCTCATCAAA TERM 2303 2995781 - 2995766 - f 78 -6 -4.7878 | overlap 2995767 GACGTAGAAAAGAAA CGGGGC TTTA GCCCCT GCGTGAGATTGGTTT TERM 2304 2995780 - 2995767 - f 70 -9.5 -3.46183 | overlap 2995766 ACGTAGAAAAGAAAC GGGGC TTTA GCCCC TGCGTGAGATTGGTT TERM 2305 2996547 - 2996528 - g 80 -9.2 -4.21438 | CAGGCCAAGAAAGAA GCCGCACC TTCC GGCGCGAC CCACACCGTCACCTA Acid345_2536 2995862 - 2997958 + | peptidase M1, membrane alanine aminopeptidase Acid345_2537 2997962 - 2998291 + | hypothetical protein TERM 2306 2998327 - 2998306 - T 100 -13.7 -5.27335 | GTTCCCAAAGAAAAA GGCCGGACA TTTT CGTCCGGCC CTCTGAGTCCCGAAT Acid345_2538 2999353 - 2998346 - | kinase-like protein TERM 2307 2998922 - 2998955 + g 77 -11.7 -3.60792 | gap 1 CGCTGCCGGAGCACT CGGCGCGGGAG-CAGC ATC GTTGGCTTCCGCGGCG TTTGCAGCTTCCGCC Acid345_2539 3000669 - 2999401 - | hypothetical protein TERM 2308 3000813 - 3000796 - R 74 -2.5 -5.01732 | opp_overlap 3000785 3000783, overlap 3000797 3000798 AAGCCTTCGAAAAAA TCGGGGC TTTA GCCCCTG CAACCGTCTATTCAA Acid345_2540 3001600 - 3001181 - | hypothetical protein Acid345_2541 3001778 - 3002782 + | glyceraldehyde-3-phosphate dehydrogenase TERM 2309 3002778 - 3002825 + F 78 -2.6 -5.24129 | gap 1, opp_overlap 3002789 3002791, overlap 3002791 TCGGAAACAAAGGCC TGTAAGCA-TAAGAGGGCCGGGC AAA GCTCGGCCCTTTCGCTTCGCACA TTTTTTGTGCGAGGC TERM 2310 3002813 - 3002789 - f 77 -11.3 -3.50853 | opp_overlap 3002778 3002791, overlap 3002791 GGCCTGTAAGCATAA GAGGGCCGGGC AAA GCTCGGCCCTT TCGCTTCGCACATTT TERM 2311 3002791 - 3002811 + F 100 -16.1 -3.75332 | opp_overlap 3002789 3002791, overlap 3002778 CCTGTAAGCATAAGA GGGCCGGGC AAA GCTCGGCCC TTTCGCTTCGCACAT TERM 2312 3002811 - 3002791 - f 88 -13.9 -3.32946 | opp_overlap 3002791 3002778, overlap 3002789 CCTGTAAGCATAAGA GGGCCGGGC AAA GCTCGGCCC TTTCGCTTCGCACAT TERM 2313 3003465 - 3003455 - g 74 -8.2 -4.12902 | opp_overlap 3003455 GAAGCAGTTGGAAAA GGGC CAG GCCC TTCTGCTGGAGAATG Acid345_2542 3003111 - 3004322 + | phosphoglycerate kinase Acid345_2543 3004323 - 3004901 + | AraC family regulator Acid345_2544 3004898 - 3005650 + | triosephosphate isomerase TERM 2314 3005695 - 3005671 - T 100 -14.4 -4.92828 | opp_overlap 3005671 AAACTCAAAAAGAAA GGGCAGAATG CGCTT CATTCTGCCC TTTTGCTCTGCATTT TERM 2315 3005671 - 3005695 + T 100 -14.4 -4.37534 | opp_overlap 3005671 AAACTCAAAAAGAAA GGGCAGAATG CGCTT CATTCTGCCC TTTTGCTCTGCATTT Acid345_2545 3006225 - 3005719 - | hypothetical protein Acid345_2546 3006606 - 3006301 - | hypothetical protein TERM 2316 3006340 - 3006355 + g 78 -9 -4.25283 | opp_overlap 3006340 ATTCCGACGCACATA CCAGCA AGGA TGCTGG TTTTCGTGCGGCAAT TERM 2317 3006609 - 3006638 + r 84 -13.6 -3.03243 | opp_overlap 3006609 3006613, overlap 3006613 AACTATAGCGCACAA GAAAGCCGTGGC GCGAAG GCCACGGCTTCC TGTTACACCCTGGAT TERM 2318 3006638 - 3006609 - R 100 -15.8 -3.35706 | opp_overlap 3006609 3006613, overlap 3006613 AACTATAGCGCACAA GAAAGCCGTGGC GCGAAG GCCACGGCTTCC TGTTACACCCTGGAT TERM 2319 3006634 - 3006613 - R 100 -13 -4.32579 | opp_overlap 3006609 3006613, overlap 3006609 ATAGCGCACAAGAAA GCCGTGGC GCGAAG GCCACGGC TTCCTGTTACACCCT TERM 2320 3006613 - 3006634 + r 84 -13 -3.36452 | opp_overlap 3006613 3006609, overlap 3006609 ATAGCGCACAAGAAA GCCGTGGC GCGAAG GCCACGGC TTCCTGTTACACCCT Acid345_2547 3007200 - 3006655 - | hypothetical protein Acid345_2548 3007608 - 3007219 - | hypothetical protein Acid345_2549 3007906 - 3007622 - | hypothetical protein Acid345_2550 3007934 - 3008329 + | hypothetical protein Acid345_2551 3010275 - 3008332 - | outer membrane efflux protein Acid345_2552 3011627 - 3010272 - | secretion protein HlyD TERM 2321 3010346 - 3010365 + g 73 -11.4 -3.32963 | overlap 3010349 CACTGGGTGGTTGCG CAGCGCCC GGCC GGGCGTTG TTCTGAGATGCGAGT TERM 2322 3010349 - 3010362 + g 75 -9.5 -3.80733 | overlap 3010346 TGGGTGGTTGCGCAG CGCCC GGCC GGGCG TTGTTCTGAGATGCG Acid345_2553 3014846 - 3011628 - | acriflavin resistance protein TERM 2323 3011786 - 3011802 + g 93 -11.5 -4.63486 | opp_overlap 3011781 GTCCACCAATCACGG CGCGCCC GAG GGGTGCG TTTTGTTCGCCGCCT TERM 2324 3012054 - 3012034 - G 71 -6.9 -4.14243 | GAGGGCACGTTAAAA GTCGTTTGC GTC ACAAACAAC ATCCACAAGATCCCT TERM 2325 3014019 - 3013994 - G 78 -9.7 -4.07568 | opp_overlap 3014005 TGCCGTTCTTCAAAA CGGTCAGCATT GCTG AACGCTGGCCG TTCAACCGCACAACG Acid345_2554 3016637 - 3014982 - | PAS/PAC sensor hybrid histidine kinase TERM 2326 3015935 - 3015914 - G 77 -10.1 -3.89354 | overlap 3015891 GGCTGAAAGCAAGAA GCTGACGCG TGAG CGCGTTAGC ACGCTGGGTCGCACT Acid345_2555 3016823 - 3019009 + | TPR repeat-containing protein TERM 2327 3019362 - 3019404 + T 77 -7.7 -4.30809 | opp_overlap 3019364 3019366, overlap 3019363 3019366 CCAATCCAATCGGAA AATACGAGCCGCCTTTC ACATTTCAC GAAAGGCGGCTCGTCGC TTTTGCTCAGTATTG TERM 2328 3019363 - 3019403 + T 74 -11.2 -3.17762 | opp_overlap 3019364 3019366, overlap 3019362 3019366 CAATCCAATCGGAAA ATACGAGCCGCCTTTC ACATTTCAC GAAAGGCGGCTCGTCG CTTTTGCTCAGTATT TERM 2329 3019402 - 3019364 - T 100 -16.8 -4.20354 | opp_overlap 3019363 3019362 3019366, overlap 3019366 AATCCAATCGGAAAA TACGAGCCGCCTTTCACA TTT CACGAAAGGCGGCTCGTC GCTTTTGCTCAGTAT TERM 2330 3019400 - 3019366 - T 100 -19.4 -3.69618 | opp_overlap 3019366 3019363 3019362, overlap 3019364 TCCAATCGGAAAATA CGAGCCGCCTTTCACA TTT CACGAAAGGCGGCTCG TCGCTTTTGCTCAGT TERM 2331 3019366 - 3019400 + T 91 -17.3 -2.78049 | opp_overlap 3019364 3019366, overlap 3019363 3019362 TCCAATCGGAAAATA CGAGCCGCCTTTC ACATTTCAC GAAAGGCGGCTCG TCGCTTTTGCTCAGT Acid345_2556 3020862 - 3019411 - | amidohydrolase TERM 2332 3019911 - 3019893 - G 71 -10.2 -3.53012 | opp_overlap 3019892 TGTTGCGCTTCGAAA GCGCCGGA CGC CCCGGCAC GATATTTTCAAACAC TERM 2333 3021138 - 3021120 - g 71 -10.2 -3.53091 | overlap 3021123 ATCGGCCTTTCGAAA GCACGCCG CGC CGGCGTCC CGTTGAAGGCACCAG TERM 2334 3021359 - 3021341 - g 72 -4.4 -4.65895 | overlap 3021342 3021343 GTCCGCAGCCAAAAA GCGCAGCG CTG CATCGCGC AGCAAAGCCGCAAAA TERM 2335 3021397 - 3021378 - g 87 -4.2 -5.4477 | gap 1, overlap 3021379 3021380 3021392 AAAGCCGCAAAAAAA GCCGCCCGT ACC AAGGGCG-C AACCGGCCGCCGTAC Acid345_2557 3020955 - 3021449 + | hypothetical protein TERM 2336 3022526 - 3022474 - g 73 -11.9 -3.03159 | overlap 3022487 3022509 CCAAGCCGCCGAATA CGACGACGACGAAGCCGACCTCCTC GAA GAAGAAATCGCCGCCGACATCGCCG AAGAAAAGAAACTCG TERM 2337 3022601 - 3022584 - g 79 -6.9 -4.70879 | overlap 3022575 3022585 3022596 GCGAAACCGCAAAAA CCGCGGC GAAC ACCGCGA CTCTCCCCGGGAAAA TERM 2338 3022632 - 3022618 - g 79 -7 -4.56597 | TCTCCCCGGGAAAAA GCCCGC CGC GCGCGC CGAAACCACCGCATC Acid345_2558 3022136 - 3022729 + | hypothetical protein TERM 2339 3022752 - 3022727 - T 76 -8.9 -3.93556 | overlap 3022729 3022730 AGCGACGGAATGAAA TAGCCCACCGC GTAA GCGGTGGGAAA TGGAAGAGGAAAAGA TERM 2340 3022750 - 3022729 - T 77 -11.5 -3.55604 | overlap 3022727 3022730 CGACGGAATGAAATA GCCCACCGC GTAA GCGGTGGGA AATGGAAGAGGAAAA TERM 2341 3022749 - 3022730 - T 83 -15 -2.72881 | overlap 3022729 3022727 GACGGAATGAAATAG CCCACCGC GTAA GCGGTGGG AAATGGAAGAGGAAA TERM 2342 3022795 - 3022770 - T 81 -6.7 -4.77698 | overlap 3022766 3022775 GAAGAGGAAAAGAAA GGAGAGTCCCC TTCA GGGGACGACCC CGGGAACCTACAACA TERM 2343 3022790 - 3022775 - T 71 -10.4 -3.18088 | overlap 3022766 3022770 GGAAAAGAAAGGAGA GTCCCC TTCA GGGGAC GACCCCGGGAACCTA Acid345_2559 3024228 - 3023005 - | major facilitator transporter Acid345_2560 3024380 - 3025120 + | hypothetical protein Acid345_2561 3025210 - 3025740 + | peptidylprolyl isomerase TERM 2344 3025780 - 3025759 - T 91 -11.6 -4.35524 | opp_overlap 3025759 TCTGCAAATTCAAAA GGGCGAGT TTACCG ACTCGCCC TTTCTTCGTGCCTAT TERM 2345 3025759 - 3025780 + T 93 -12.3 -4.26202 | opp_overlap 3025759 TCTGCAAATTCAAAA GGGCGAGTT TACC GACTCGCCC TTTCTTCGTGCCTAT Acid345_2562 3026649 - 3025831 - | uroporphyrinogen-III synthase Acid345_2563 3027589 - 3026654 - | hydroxymethylbilane synthase Acid345_2564 3028912 - 3027602 - | glutamyl-tRNA reductase TERM 2346 3027841 - 3027814 - G 71 -7.6 -3.96148 | opp_overlap 3027816 3027825 CCTGCTCAGGAGAAA GTTCGCCTAAGC GGCC GCGCAGGCGATC GATTTCAGCTTGCCG Acid345_2565 3029721 - 3028909 - | cytochrome c assembly protein Acid345_2566 3029905 - 3030117 + | hypothetical protein TERM 2347 3030164 - 3030144 - T 100 -14 -4.67641 | opp_overlap 3030144 AGGCCAAAAGCAAAA CCGGCAGC GCTCG GCTGCCGG TTTCTGTCTGCAATC TERM 2348 3030144 - 3030164 + T 100 -14 -4.13246 | opp_overlap 3030144 AGGCCAAAAGCAAAA CCGGCAGC GCTCG GCTGCCGG TTTCTGTCTGCAATC Acid345_2567 3031366 - 3030188 - | peptidase M48, Ste24p Acid345_2568 3031908 - 3031534 - | hypothetical protein Acid345_2569 3032511 - 3031984 - | hypothetical protein TERM 2349 3032365 - 3032406 + g 75 -9.6 -3.92542 | overlap 3032371 GATCAACTTCGTCTC TTCAATGC-GCAGGATGGCG ACTT CGTCCTCCTGCAGC-TTGAA TTGTTTCGCCATCAA Acid345_2570 3032811 - 3033572 + | succinate dehydrogenase subunit C TERM 2350 3034129 - 3034115 - g 72 -8.5 -3.84808 | opp_overlap 3034114 CGTAATCGACAACAA CCGCG TTTGT CGCGG AATTTGTGCCATCGA sdhA 3033609 - 3035390 + | succinate dehydrogenase flavoprotein subunit sdhB 3035400 - 3036149 + | succinate dehydrogenase iron-sulfur subunit TERM 2351 3036167 - 3036199 + F 100 -18.6 -3.68529 | opp_overlap 3036169 3036173 3036174, overlap 3036174 GGCATTCGGTTTCAA CAGAAAGGCTCCGC ACCGC GCGGAGCTTTTCTG TTTCCCTGATCGAAT TERM 2352 3036197 - 3036169 - f 84 -13.9 -3.01924 | opp_overlap 3036167 3036174, overlap 3036173 3036174 CATTCGGTTTCAACA GAAAGGCTCCGCA CCG CGCGGAGCTTTTC TGTTTCCCTGATCGA TERM 2353 3036193 - 3036173 - f 80 -8.9 -4.1891 | opp_overlap 3036167 3036174, overlap 3036169 3036174 CGGTTTCAACAGAAA GGCTCCGCA CCG CGCGGAGCT TTTCTGTTTCCCTGA TERM 2354 3036192 - 3036174 - f 76 -12.4 -3.11024 | opp_overlap 3036174 3036167, overlap 3036173 3036169 GGTTTCAACAGAAAG GCTCCGCA CCG CGCGGAGC TTTTCTGTTTCCCTG TERM 2355 3036174 - 3036192 + F 100 -11.7 -4.80455 | opp_overlap 3036173 3036169 3036174, overlap 3036167 GGTTTCAACAGAAAG GCTCCGC ACCGC GCGGAGC TTTTCTGTTTCCCTG Acid345_2573 3036332 - 3037867 + | Cna B-type protein Acid345_2574 3037867 - 3039999 + | hypothetical protein TERM 2356 3040046 - 3040026 - T 100 -10.3 -4.75518 | opp_overlap 3040026 CACAGAAAATGAAAA GGCTCCGCA CCA CGCGGGGCC TTCGTCATCTCCGAT TERM 2357 3040026 - 3040046 + T 78 -11.8 -3.24925 | opp_overlap 3040026 CACAGAAAATGAAAA GGCTCCGC ACCAC GCGGGGCC TTCGTCATCTCCGAT Acid345_2575 3041672 - 3040062 - | intradiol ring-cleavage dioxygenase Acid345_2576 3043372 - 3041669 - | hypothetical protein TERM 2358 3042732 - 3042703 - G 78 -6.3 -4.64861 | overlap 3042705 3042713 CGTTCGGAAAATAAA CCGGAGGATAGCC GTAG AGCTGCCCTCCCG GCACAATGTCCTGCG TERM 2359 3043424 - 3043412 - H 71 -7.7 -3.97444 | overlap 3043421 ACACGAGCAAGCAAA CGTCT AAC AGACG CACAATTCGGACCGG Acid345_2577 3043734 - 3044447 + | hypothetical protein TERM 2360 3044469 - 3044488 + F 100 -15 -4.35044 | opp_overlap 3044468 3044467 TGCGATTCCCAAACG CGGCGGGA TGAT TCCCGCCG TTTCTATTTGGATGG TERM 2361 3044577 - 3044564 - g 70 -2.4 -4.82901 | CTCCCGGGACAAAAA TTGG GCCCTA CCAA GTTGACGCGCTCCTC Acid345_2578 3044539 - 3047496 + | serine/threonine protein kinase TERM 2362 3047776 - 3047787 + G 83 -5.8 -4.89852 | opp_overlap 3047768 3047767, overlap 3047769 3047768 GCCAAAGCCGGCAAC CTCG GTGC CGAG TTTTTCTCGATCTGG Acid345_2579 3047545 - 3048834 + | membrane dipeptidase Acid345_2580 3048856 - 3049656 + | peptidylprolyl isomerase TERM 2363 3049665 - 3049689 + F 91 -15 -3.09878 | opp_overlap 3049657 GCAATGAGCCCAACG CGGGGCGGAC CACCC GTTCGCCCCG TATTCACTCAGTGGA Acid345_2581 3049700 - 3049963 + | hypothetical protein TERM 2364 3049976 - 3050004 + T 100 -12.4 -4.60889 | opp_overlap 3049974, overlap 3049977 3049981 TAGTGAGACCGAATT GCGAAGCCCCGC GCGCA GCGGGGCTTTGA TTTTTGCAGGTAGTT TERM 2365 3049977 - 3050003 + T 100 -15.9 -3.3581 | opp_overlap 3049974, overlap 3049976 3049981 AGTGAGACCGAATTG CGAAGCCCCGC GCGCA GCGGGGCTTTG ATTTTTGCAGGTAGT TERM 2366 3049981 - 3049999 + T 100 -13.1 -4.32046 | opp_overlap 3049974, overlap 3049977 3049976 AGACCGAATTGCGAA GCCCCGC GCGCA GCGGGGC TTTGATTTTTGCAGG Acid345_2582 3050634 - 3050020 - | hypothetical protein TERM 2367 3050428 - 3050444 + g 72 -5.1 -4.64861 | opp_overlap 3050428, overlap 3050417 CGGCTTCCCATAAAT CCGAC CCACCAC GTCGG TTTGTTTTACGGGAA Acid345_2583 3050957 - 3053092 + | protein-tyrosine kinase Acid345_2584 3053089 - 3053955 + | polysaccharide export protein Acid345_2585 3053958 - 3054692 + | YdjC-like protein TERM 2368 3054761 - 3054776 + G 72 -4.6 -4.59982 | overlap 3054762 TCGCGCACCGCCCGC ACGCTG GTTA CAGCGC TTTATTTCATTCTGC Acid345_2586 3054737 - 3055972 + | polysaccharide biosynthesis protein TERM 2369 3056961 - 3056974 + G 84 -2.3 -5.41746 | overlap 3056935 ACTACAGGTCGGCGT GATCG GGAT CGTTC TTTTTTTCGCCGGTT Acid345_2587 3055969 - 3057198 + | O-antigen polymerase Acid345_2588 3057195 - 3058115 + | glycosyl transferase family protein Acid345_2589 3058112 - 3059302 + | hypothetical protein Acid345_2590 3059306 - 3060331 + | hypothetical protein Acid345_2591 3060367 - 3061059 + | undecaprenyl-phosphate galactosephosphotransferase Acid345_2592 3061831 - 3061067 - | phosphomethylpyrimidine kinase TERM 2370 3061928 - 3061918 - H 80 -5.4 -4.86862 | TGCAAAAAAGTAAAA GAGT TAC ACTC GCCAACAACTCTCAA Acid345_2593 3062219 - 3062719 + | rare lipoprotein A Acid345_2594 3062762 - 3063466 + | orotidine-5'-phosphate decarboxylase Acid345_2595 3064559 - 3063546 - | peptidase M50 Acid345_2596 3065307 - 3064564 - | hypothetical protein Acid345_2597 3065973 - 3065434 - | hypothetical protein Acid345_2598 3066493 - 3066029 - | GCN5-related N-acetyltransferase TERM 2371 3066249 - 3066272 + g 76 -11.8 -3.40403 | gap 1, opp_overlap 3066248 3066246 3066249 3066251 ATGTCCTGCAAATAG CACGACGGCAG CAA CTGC-GTCGTG TTCTCGTGCACCACA Acid345_2599 3066885 - 3066505 - | camphor resistance protein CrcB TERM 2372 3066839 - 3066826 - G 75 -9.5 -3.79687 | overlap 3066824 ACGGCTCAGAAAATA GCGCG CGCA CGCGC CTACGATTCCGCCCA Acid345_2600 3067940 - 3066999 - | 6-phosphogluconate dehydrogenase, NAD-binding Acid345_2601 3068659 - 3069444 + | 4Fe-4S ferredoxin, iron-sulfur binding TERM 2373 3069699 - 3069680 - g 80 -4.9 -4.87626 | CTTCAACATCAAAAA GCTGCAC CCCATC GTGCGGC CCACGGTGCTAACGG Acid345_2602 3069441 - 3070637 + | polysulphide reductase, NrfD TERM 2374 3071613 - 3071601 - g 78 -7.7 -4.45083 | overlap 3071603 3071604 GCTACACGTAGAAAA GATGG CGA CCATC GGCAAAATGGCAGCC Acid345_2603 3070624 - 3072336 + | periplasmic sensor signal transduction histidine kinase Acid345_2604 3072340 - 3073719 + | two component, sigma54 specific, Fis family transcriptional regulator Acid345_2605 3073719 - 3074240 + | peptidase, zinc-dependent Acid345_2606 3074863 - 3074609 - | hypothetical protein TERM 2375 3074737 - 3074750 + g 83 -9.5 -4.33165 | CCAACTGAATGCCTT GGCGC TTGC GCGCC TTTTCCTGCATTTCA Acid345_2607 3075846 - 3074974 - | DNA end-binding protein Ku TERM 2376 3076053 - 3076067 + G 75 -5.6 -4.64766 | GCATCGCCGCTGCGC TCGCCG TCA CCGCGA TTTTTGCGCTCTGGG TERM 2377 3076157 - 3076171 + G 70 -2.7 -4.86773 | overlap 3076158 3076168 GCCATCTATCTCGGT ACCGG AGTCG CCGGA TTTTTCGTCCTTTTC Acid345_2608 3075986 - 3076744 + | hypothetical protein Acid345_2609 3076930 - 3078885 + | N-acyl-D-amino-acid deacylase TERM 2378 3078931 - 3078889 - f 71 -4.9 -4.58773 | gap 2, opp_overlap 3078889 3078891, overlap 3078890 3078891 3078920 CGCACCAAATGAAAA TGGGGCTACCCC-GTT-AGGT GCC ACCTCAACAGGGGTAGTCCTC TCGTAACCACCCCGA TERM 2379 3078929 - 3078891 - f 72 -11.9 -2.60002 | gap 2, opp_overlap 3078889 3078891, overlap 3078890 3078889 3078920 CACCAAATGAAAATG GGGCTACCCC-GTT-AGGT GCC ACCTCAACAGGGGTAGTCC TCTCGTAACCACCCC TERM 2380 3078891 - 3078929 + F 83 -14.1 -2.78384 | gap 2, opp_overlap 3078890 3078889 3078891 3078920, overlap 3078889 CACCAAATGAAAATG GGGCTACCCC-GTT-AGGT GCC ACCTCAACAGGGGTAGTCC TCTCGTAACCACCCC Acid345_2610 3079075 - 3079860 + | putative cyclase TERM 2381 3079926 - 3079910 - T 76 -12.3 -3.06183 | TTCATCCTGAGCGAA GCAGCAC AAA GTGCTGC GCAGTCGAAGGATCC TERM 2382 3079982 - 3080005 + T 72 -12.4 -2.82933 | opp_overlap 3079982 GCGCGCAAACAAAAA CCCCGCCGAT TTTC ATCGACGGGG TCTAATCCCTTGGGG TERM 2383 3080005 - 3079982 - T 100 -14.6 -5.27335 | opp_overlap 3079982 GCGCGCAAACAAAAA CCCCGCCGAT TTTC ATCGACGGGG TCTAATCCCTTGGGG Acid345_2611 3080764 - 3080156 - | hypothetical protein TERM 2384 3080730 - 3080695 - G 100 -9.6 -5.08255 | opp_overlap 3080695 3080722, overlap 3080696 ACGCGTAAAAGAAAA GGGCTCCCGCGACGAC AACT GTCAGCACGAGAGCCG CGATTTTTCTACGGG TERM 2385 3080729 - 3080696 - G 84 -13.1 -3.63868 | opp_overlap 3080695 3080722, overlap 3080695 CGCGTAAAAGAAAAG GGCTCCCGCGACGAC AACT GTCAGCACGAGAGCC GCGATTTTTCTACGG Acid345_2612 3081408 - 3080761 - | translation factor SUA5 Acid345_2613 3081497 - 3082354 + | tRNA/rRNA methyltransferase (SpoU) Acid345_2614 3082351 - 3083694 + | recombination factor protein RarA Acid345_2615 3086145 - 3083764 - | hypothetical protein TERM 2386 3084859 - 3084880 + g 75 -3.7 -4.82901 | gap 1 CTTGCCGCCATTCTT CGCCTTC-AG CGC CTCGAAGCCG TTTTTCTCGAGAACA TERM 2387 3085513 - 3085533 + g 74 -11.1 -3.61103 | opp_overlap 3085525 3085528 CGTATGGTCCATGCC GAGCGGTTC AAA GATCCGCTC TTTCGCGTAGCGTTC Acid345_2616 3086210 - 3087310 + | beta-lactamase TERM 2388 3088026 - 3088016 - g 76 -6.8 -4.56133 | overlap 3088017 CCTGAAGAACCAAAA GCTC GTG GAGC GAGGCATTCGCATCG murQ 3087300 - 3088214 + | N-acetylmuramic acid-6-phosphate etherase Acid345_2618 3088945 - 3088211 - | 1-acyl-sn-glycerol-3-phosphate acyltransferase Acid345_2619 3090786 - 3088942 - | peptidase M61 Acid345_2620 3092189 - 3090783 - | UDP-N-acetylmuramate--L-alanine ligase Acid345_2621 3093175 - 3092186 - | peptidase U61, LD-carboxypeptidase A Acid345_2622 3093959 - 3093177 - | diaminopimelate epimerase Acid345_2623 3094691 - 3093963 - | MgtC/SapB transporter Acid345_2624 3096367 - 3094736 - | hypothetical protein TERM 2389 3094849 - 3094888 + g 75 -4.2 -4.8543 | gap 1 GCGCCTTTACGGCTT GCGCGACCTCATCGTTACC GAA GGCGATGATGTAGTC-CGC TTTTTCTGCCGGTTG TERM 2390 3095683 - 3095696 + g 78 -3.8 -5.0065 | overlap 3095690 AGTGAATGGCGGAGC GCGT CAGCAA ACGC TTTTGTTTGTCGCTC Acid345_2625 3097293 - 3096367 - | ribokinase family sugar kinase Acid345_2626 3098175 - 3097297 - | methylthioadenosine phosphorylase Acid345_2627 3100068 - 3098476 - | hypothetical protein TERM 2391 3100215 - 3100202 - g 75 -5.9 -4.66537 | TGCTTCAAGAGAAAA CCGCG CCGG CACGG ATGGGCGAGTACCAC TERM 2392 3100451 - 3100463 + G 74 -7.7 -4.11216 | AGGGCCGCATTCAGG GCGAT CTC ATCGC TTTTCAGCGTGGCGA Acid345_2628 3100174 - 3101202 + | glycine cleavage T protein, aminomethyl transferase Acid345_2629 3101205 - 3101816 + | hypothetical protein TERM 2393 3102552 - 3102535 - g 71 -10.5 -3.58162 | GCACGAGGAAACCAA CCGGCAG CTTC CCGCCGG GATTCAACTGGCCCA Acid345_2630 3101816 - 3102598 + | beta-lactamase-like Acid345_2631 3102604 - 3103551 + | riboflavin kinase / FMN adenylyltransferase TERM 2394 3103735 - 3103765 + G 73 -12.4 -3.05816 | TCGCAGGCCACTCCC GCGCAGCGCCGCAC CTT GCTCGCCGCTGCGC TTGGCTGGGCACTGG TERM 2395 3104554 - 3104571 + G 75 -4.1 -4.77047 | gap 1, opp_overlap 3104557 TTCGCCGATCGCATA GGACG-CC GCT GGTCGTTC TTTCTTTATCTTTTC Acid345_2632 3103714 - 3104922 + | major facilitator transporter TERM 2396 3104908 - 3104897 - T 71 -7.2 -3.96148 | TCCTGTTACCAGAAA CGCG GGGC CGCG AACTTGCGAATTGAA Acid345_2633 3105365 - 3104934 - | hypothetical protein Acid345_2634 3106459 - 3105476 - | DMT family permease Acid345_2635 3106467 - 3108128 + | serine protease, kumamolysin Acid345_2636 3108544 - 3108155 - | PilT protein-like Acid345_2637 3108825 - 3108541 - | prevent-host-death protein TERM 2397 3109806 - 3109784 - g 71 -8.3 -3.99494 | overlap 3109799 GCAACTGAACAACAA GCTGCGCCC AGCGA AGGCGCGGC ACCGACCACTGAAGC TERM 2398 3112026 - 3111989 - g 71 -8.3 -4.08144 | gap 1, overlap 3112003 GTGAGCAACGAGAAA TCCGAGCGCGAGAACGCC ATC GGCGGCCT-GCGCATGGA ACTCGAAGCCGCCGA TERM 2399 3112737 - 3112701 - g 75 -8.5 -4.03782 | overlap 3112696 3112693 3112702 AAGAGTACAAGGAAA CCGCGCAGCGCCACGAG TTC CTCGAGACCCAGCGCAA AGACCTGCTCGACTC Acid345_2638 3109349 - 3113275 + | chromosome segregation protein SMC TERM 2400 3113311 - 3113333 + T 100 -14.2 -5.69262 | opp_overlap 3113310 3113311 ATGAAGTGCACGAAG GGGGATTGGA AAT TCCAGTCCCC TTTTTCTTTTTCTGA TERM 2401 3113333 - 3113311 - T 71 -12 -2.51173 | opp_overlap 3113311, overlap 3113310 ATGAAGTGCACGAAG GGGGATTGGA AAT TCCAGTCCCC TTTTTCTTTTTCTGA Acid345_2639 3114101 - 3113397 - | hypothetical protein TERM 2402 3113726 - 3113711 - G 88 -10.4 -4.431 | GATTGAGCCACAAAA GCCGAG GGAC CTCGGC AATACCAATGGCGAA TERM 2403 3113843 - 3113827 - G 74 -7.2 -4.38927 | CCCGCAGAGAATAAA GCCGCG CCGGT CGCAGC GAAAATCAGGCAGTT Acid345_2640 3114217 - 3115626 + | hypothetical protein Acid345_2641 3115697 - 3116227 + | hypothetical protein Acid345_2642 3117331 - 3116231 - | kelch repeat-containing protein TERM 2404 3117052 - 3117062 + g 70 -2.4 -4.76191 | GCAGTGCAGCCGTCT GCCC AAC GCGC TTTATTTTCATGTGT Acid345_2643 3118597 - 3117398 - | major facilitator transporter Acid345_2644 3119749 - 3118670 - | hypothetical protein TERM 2405 3119553 - 3119526 - G 100 -17 -5.14563 | gap 1 TCTGCTATGAAAAAA GCGCGGCCGTCCG GAT CGG-CGGCCACGC CCAGGAATCCATCGT Acid345_2645 3120795 - 3119776 - | zinc-binding alcohol dehydrogenase TERM 2406 3120368 - 3120354 - G 79 -5.6 -4.83169 | overlap 3120355 3120357 ACGCCGTCAGAAAAA CCAGCG GCA CGCTCG CCGCCTCGTCGTAGG TERM 2407 3121145 - 3121125 - g 82 -13.3 -3.18429 | CAAAAGGGTTACGAA GTTGCCGCC AAG GGCAGCAAC GGATTCACCTGCCTG Acid345_2646 3120903 - 3121601 + | hypothetical protein TERM 2408 3122112 - 3122123 + F 81 -2.2 -5.32944 | gap 1, overlap 3122103 3122104 CCTGCTCGGAGAGAT CGTCG GTC CG-CG TTTTTTCCTTGTGGA TERM 2409 3123087 - 3123054 - g 71 -12.5 -2.66452 | gap 1, overlap 3123049 3123041 3123038 3123053 AGCTCGAGAAGGAAG GCGTTC-CGCTCTCGA AGT TCGAGAACGTGCACGC GCCTGTGGGCCTGGA Acid345_2647 3122408 - 3123253 + | hypothetical protein Acid345_2648 3123250 - 3123891 + | molybdenum cofactor biosynthesis protein TERM 2410 3124120 - 3124105 - g 70 -4.6 -4.55295 | overlap 3124106 CCGCCTACAAAGAAA CCAGCG CTAT CGCCGA AGAAGTCATGTGCGG Acid345_2649 3123888 - 3124604 + | haloacid dehalogenase-like hydrolase TERM 2411 3124852 - 3124831 - g 74 -2.1 -4.98531 | overlap 3124832 GCGGCAAAGGAAAAA TGCCGGCCT TCAA AGGCAAGCT AACCGACGACCGTAT Acid345_2650 3124617 - 3124910 + | hypothetical protein Acid345_2651 3125349 - 3124987 - | nitrogen-fixing NifU-like Acid345_2652 3125512 - 3126324 + | ABC Fe3+-hydroxamate transporter, periplasmic ligand binding protein Acid345_2653 3126345 - 3126836 + | putative GAF sensor protein Acid345_2654 3126837 - 3127256 + | NUDIX hydrolase TERM 2412 3127246 - 3127234 - T 86 -7.7 -4.72007 | GCTTAGTAAAAGAAA TTGCC GAA GGCAA GAGGCTGTAAGGCGG Acid345_2655 3128764 - 3127517 - | manganese transporter NRAMP TERM 2413 3127799 - 3127787 - G 100 -10.5 -4.9218 | opp_overlap 3127785 CAGCCAGTAGAAAAA CGGCG CCT CGCCG AATGACTTATCTACG Acid345_2656 3130214 - 3128976 - | Mg/Co/Ni transporter MgtE Acid345_2657 3131807 - 3131064 - | hypothetical protein Acid345_2658 3133567 - 3131906 - | glucose-methanol-choline oxidoreductase Acid345_2659 3134112 - 3133564 - | hypothetical protein TERM 2414 3134339 - 3134327 - g 71 -10.5 -3.63515 | CGCGATCTGGAAGAA GCCGG TAT CCGGC AAGGTGCTGGCGCGC TERM 2415 3134916 - 3134939 + G 72 -9.4 -3.74693 | GGCCTGATAACGGTT GCGCCGCCTC CGGC GTGGCGGGGC TTTCGTCCCCTGCGC Acid345_2660 3134241 - 3135986 + | MOSC ferredoxin--oxidoreductase Acid345_2661 3136021 - 3136962 + | aldehyde reductase Acid345_2662 3137559 - 3136972 - | hypothetical protein TERM 2416 3138338 - 3138315 - g 100 -10.3 -5.23316 | gap 1, overlap 3138307 3138317 GAGGATACGAAAAAA GC-GCCGGAG CCTTT CTCCGGCCGC GGTACCGTCATCGAA TERM 2417 3138335 - 3138317 - g 70 -11.7 -2.82658 | overlap 3138307 3138315 GGATACGAAAAAAGC GCCGGAG CCTTT CTCCGGC CGCGGTACCGTCATC Acid345_2663 3137664 - 3138437 + | Ferritin and Dps TERM 2418 3138479 - 3138459 - f 83 -9.6 -4.07618 | opp_overlap 3138460, overlap 3138460 GGTCCAAGAATCAAA GGGCGGCC TCATC GGCCGCCT TTTTCTTGAAGCCGC TERM 2419 3138460 - 3138478 + F 100 -13.1 -5.06414 | opp_overlap 3138459 3138460 GTCCAAGAATCAAAG GGCGGCC TCATC GGCCGCC TTTTTCTTGAAGCCG TERM 2420 3138478 - 3138460 - f 81 -13.1 -3.04089 | opp_overlap 3138460, overlap 3138459 GTCCAAGAATCAAAG GGCGGCC TCATC GGCCGCC TTTTTCTTGAAGCCG TERM 2421 3139428 - 3139370 - g 86 -6.7 -4.89966 | overlap 3139371 3139372 ACATGCAAAAAGAAA TCGGGCGACAA-GCTCTGGTGCGGAACCT GCC ACGATCCGCACCGAACCATCGCC-CCCGA AGAACGCGTCTCGTT TERM 2422 3139424 - 3139372 - g 71 -12.8 -2.70327 | gap 2, overlap 3139371 3139370 ATGCAAAAAGAAATC GGGCGACAAGCTCTGGTGCGGAACCT GCC ACGATCCGCACC-GAAC-CATCGCCC CCGAAGAACGCGTCT Acid345_2664 3138536 - 3140149 + | TPR repeat-containing protein Acid345_2665 3140959 - 3140156 - | PEGA domain-containing protein TERM 2423 3140919 - 3140896 - G 74 -8.1 -4.17132 | gap 1 AAATTGTGGAAGAAA GGGCGAGCAG GATCA CCGC-CGCCC ATCGAAAACGAGCCA TERM 2424 3141184 - 3141171 - R 100 -9.5 -4.86731 | opp_overlap 3141171 GCGCCCGAAAGAAAA GGGGC TTCA GCCCC TGCGTTCATCCCCGC Acid345_2666 3142185 - 3141190 - | dihydrodipicolinate synthetase Acid345_2667 3143261 - 3142305 - | integral membrane protein TerC TERM 2425 3142896 - 3142874 - G 100 -7.6 -5.61881 | overlap 3142886 CCGCAAAAATAAAAA CGGCGCGC ATAATCA GCGCCCCG ACAATCCCCCACGTC Acid345_2668 3143701 - 3143321 - | hypothetical protein Acid345_2669 3144379 - 3143714 - | monofunctional biosynthetic peptidoglycan transglycosylase Acid345_2670 3144551 - 3147325 + | Ig-like, group 2 TERM 2426 3147348 - 3147380 + T 100 -9.9 -4.86731 | opp_overlap 3147342, overlap 3147342 3147349 CAAAAACACCGGGTG CCCCCATTTCTCG CGTTTTT CGAGAAGTGGGGC TTTTATTTCGCCGCC TERM 2427 3147349 - 3147379 + T 89 -13.4 -3.51557 | opp_overlap 3147342, overlap 3147342 3147348 AAAAACACCGGGTGC CCCCATTTCTCG CGTTTTT CGAGAAGTGGGG CTTTTATTTCGCCGC Acid345_2671 3147940 - 3147383 - | hypothetical protein TERM 2428 3148005 - 3148017 + r 86 -10.5 -4.08767 | GGATCATCGGGTGCC CCGCG TCT CGCGG TTTTCGAGACGTGGG TERM 2429 3148178 - 3148156 - R 71 -11.2 -2.9914 | opp_overlap 3148156, overlap 3148138 3148160 GACCCCCGACATACA GCAAGGCCGG AGG CCGACCATGC TTCTAAGCACGACGC Acid345_2672 3150104 - 3148305 - | Na+/solute symporter TERM 2430 3150185 - 3150173 - H 70 -5.5 -4.49838 | AAGAACAAACACAAA GCACA ATC TGCGC CCCTGTCATCCTGAA Acid345_2673 3150478 - 3151290 + | Rieske (2Fe-2S) oxidoreductase TERM 2431 3151812 - 3151796 - g 71 -7.9 -4.07568 | opp_overlap 3151796 TTCTGTCGCGCAAAA CGTCGTC ACT GGCGACG TCTCTGGTACCGTCA Acid345_2674 3151725 - 3155123 + | hypothetical protein TERM 2432 3155161 - 3155182 + F 100 -11.5 -5.55769 | opp_overlap 3155159 3155162, overlap 3155162 CTGAACTCACAAACC AGGGCGCTC GCAA GAGCGCCCC TTTTTTCTTCTCCGC TERM 2433 3155162 - 3155181 + F 100 -15 -3.92377 | opp_overlap 3155159 3155162, overlap 3155161 TGAACTCACAAACCA GGGCGCTC GCAA GAGCGCCC CTTTTTTCTTCTCCG TERM 2434 3155181 - 3155162 - f 91 -15 -3.04203 | opp_overlap 3155162 3155161, overlap 3155159 TGAACTCACAAACCA GGGCGCTC GCAA GAGCGCCC CTTTTTTCTTCTCCG TERM 2435 3157466 - 3157449 - g 74 -7.7 -4.21908 | CACGATCACCCAAAA GATCCGC GTTT ACGGATC GTGGCTCTATCAGTA Acid345_2675 3156301 - 3159867 + | TonB-dependent receptor TERM 2436 3159889 - 3159910 + T 100 -13.7 -4.42235 | overlap 3159886 ACTTGCAGTACTTTT GGGAGCCGG TTCG CCGGTTCCC TTCTTTTTGCCCGTT TERM 2437 3160452 - 3160427 - T 100 -17.7 -3.61398 | opp_overlap 3160432, overlap 3160432 TGTTTTCTGGAATAA CAAAACCCGCC TAAT GGCGGGTTTTG TTGAAACTACAGCCA TERM 2438 3160432 - 3160447 + T 100 -11.8 -4.64676 | opp_overlap 3160427 3160432 TCTGGAATAACAAAA CCCGCC TAAT GGCGGG TTTTGTTGAAACTAC TERM 2439 3160447 - 3160432 - T 100 -11.8 -4.89477 | opp_overlap 3160432, overlap 3160427 TCTGGAATAACAAAA CCCGCC TAAT GGCGGG TTTTGTTGAAACTAC Acid345_2676 3162089 - 3160473 - | carboxyl-terminal protease TERM 2440 3160862 - 3160883 + g 86 -8.7 -4.56775 | opp_overlap 3160845 CGTACTTGATGAGCA GGCGATCCT GGAA GGGATTGCC TTTTTGCGGAGCAAT TERM 2441 3162519 - 3162533 + G 81 -3.4 -5.27335 | opp_overlap 3162511 AGAATTACCTCGATA CGCAGG GGT TCAGCG TTTTTCTTTACGACA TERM 2442 3163205 - 3163191 - g 71 -7.8 -4.07568 | opp_overlap 3163176 3163204, overlap 3163194 TCCCGGCGGGCAAAA CGACCG GCG CGATCG TCTGGCACATCAGGC Acid345_2677 3162488 - 3165055 + | glycoside hydrolase family protein Acid345_2678 3165788 - 3165072 - | hypothetical protein TERM 2443 3166263 - 3166226 - g 100 -15 -4.45083 | overlap 3166227 3166228 3166256 3166257 3166259 TCCAGACGGAGAAAA CTCCCA-CCCTGTCGCGC TGTT GCGCGACAAGGATGGG-G CACCCACCGAGATGC TERM 2444 3166263 - 3166227 - g 87 -15.2 -3.26568 | gap 1, overlap 3166226 3166228 3166256 3166257 3166259 CCAGACGGAGAAAAC TCCCA-CCCTGTCGCGC TGTT GCGCGACAAGGATGGGG CACCCACCGAGATGC TERM 2445 3166262 - 3166228 - g 95 -18.7 -2.55459 | gap 1, overlap 3166226 3166227 3166256 3166257 3166259 CAGACGGAGAAAACT CCCA-CCCTGTCGCGC TGTT GCGCGACAAGGATGGG GCACCCACCGAGATG Acid345_2679 3165936 - 3166403 + | sec-independent translocation protein mttA/Hcf106 TERM 2446 3166524 - 3166537 + G 75 -9.5 -3.80573 | TTTTGTTTACATCGC CGCCG GATT CGGCG TTTGCTGGTGGTGGC Acid345_2680 3166396 - 3167211 + | Sec-independent protein translocase TatC TERM 2447 3167502 - 3167485 - g 72 -6.3 -4.31433 | GAGGGCCACAAGAAA CTCGAGA ACTA TCTCAAG ACGAAGCTGAAGAAC Acid345_2681 3167230 - 3168207 + | peptidase M28 TERM 2448 3168933 - 3168952 + G 72 -8.6 -3.79668 | gap 1, overlap 3168949 TCGATCTTGGGCTCT TCCGGTCGA ACA TCG-CCGGA TTTGATCCGTTCCAT TERM 2449 3169930 - 3169920 - g 70 -2.4 -4.72272 | opp_overlap 3169928, overlap 3169921 CGGTGCGAGTAAAAA CGCC TCC GCCG CCGGGACCAGCGGTA Acid345_2682 3168437 - 3170695 + | serine/threonine protein kinase TERM 2450 3171534 - 3171522 - g 72 -4.7 -4.64334 | overlap 3171523 3171524 AATTCCCCAACAAAA TCGCC ATC GGCGC AGCGTGGCCGGGCTT Acid345_2683 3170777 - 3171775 + | hypothetical protein Acid345_2684 3172299 - 3171772 - | hypothetical protein Acid345_2685 3172631 - 3172299 - | hypothetical protein Acid345_2686 3173628 - 3172636 - | FAD-dependent pyridine nucleotide-disulphide oxidoreductase TERM 2451 3173266 - 3173278 + g 74 -7.7 -4.18197 | GGTGTAGTCGAACTG CTTGC CGT GCAAG TTTTGAGTGCGAAGT Acid345_2687 3174791 - 3174192 - | cysteine dioxygenase type I Acid345_2688 3176716 - 3174875 - | TPR repeat-containing protein aspA 3176872 - 3178302 + | aspartate ammonia-lyase TERM 2452 3178407 - 3178428 + G 75 -9.5 -3.86194 | gap 1 TTGCATCGGCCCTCG CCGG-AATCG TGG CGATTACCGG TTTGTACGCGGCGTT Acid345_2690 3178370 - 3178912 + | hypothetical protein Acid345_2691 3181313 - 3178917 - | lytic transglycosylase, catalytic TERM 2453 3181416 - 3181435 + r 83 -10 -4.17048 | AAGTTTAGCGGAAGT TGTTGCCG AGGA CGGCGACA TTGTTTTCGGCAAGG Acid345_2692 3184461 - 3181405 - | chromosome segregation ATPases-like TERM 2454 3181807 - 3181828 + g 78 -8.7 -4.09963 | gap 1 AGCGGCAGCGGCGCT CGCCGTAGCC TGA GGCTG-GGCG TTCTTGTTCTTGGCA TERM 2455 3184081 - 3184110 + g 71 -10.7 -3.50853 | overlap 3184073 3184076 GGAATTCTCGCGGGA CTTCGCGGTCTCG TTCT CGAGATTGCGCAG TTGTCCTTCGACAGA TERM 2456 3184525 - 3184541 + H 70 -2.9 -4.82901 | opp_overlap 3184536, overlap 3184528 CCGGACACCCCCCTT TGAGGGG AAA TCCCTGA TTTTTCTAGGGGAAA TERM 2457 3184987 - 3184974 - g 80 -9.5 -4.22652 | overlap 3184967 3184964 CCACATCACGCAAAA CCGCG AAGA CGCGG AAGACGTGGTGCAGG Acid345_2693 3184822 - 3185451 + | ECF subfamily RNA polymerase sigma-24 factor TERM 2458 3185538 - 3185517 - g 72 -6.5 -4.3739 | gap 1, overlap 3185519 3185531 GACGCTCCGACAAAA GC-GGAGCTC GAA GAGCACCTGC AGTGGTGCCACAACT Acid345_2694 3185448 - 3185732 + | hypothetical protein TERM 2459 3185758 - 3185790 + F 100 -15 -5.37865 | overlap 3185759 CATAAATAGGTTTCG TTTCGACCCGTAGA AGGCC TCTACGGGTCGAAC TTTTTTGATTCTTAA TERM 2460 3185759 - 3185789 + F 100 -18.5 -3.81092 | overlap 3185758 ATAAATAGGTTTCGT TTCGACCCGTAGA AGGCC TCTACGGGTCGAA CTTTTTTGATTCTTA Acid345_2695 3185880 - 3186110 + | hypothetical protein Acid345_2696 3187162 - 3186170 - | galactose-1-phosphate uridylyltransferase Acid345_2697 3187411 - 3190059 + | DNA mismatch repair protein MutS Acid345_2698 3190064 - 3190501 + | hypothetical protein Acid345_2699 3190682 - 3191068 + | hypothetical protein TERM 2461 3191088 - 3191117 + T 100 -13.7 -4.65895 | opp_overlap 3191093, overlap 3191093 TGAGTTGCTGGAATT TAAAAGGCGGAGA TTGC TCTCCGCCTTTTC TTTTTGCCTGCGAGA TERM 2462 3191112 - 3191093 - T 100 -13.6 -4.27316 | opp_overlap 3191093 3191088 TGCTGGAATTTAAAA GGCGGAGA TTGC TCTCCGCC TTTTCTTTTTGCCTG TERM 2463 3191093 - 3191112 + T 100 -13.6 -5.2853 | opp_overlap 3191093, overlap 3191088 TGCTGGAATTTAAAA GGCGGAGA TTGC TCTCCGCC TTTTCTTTTTGCCTG Acid345_2700 3192636 - 3191137 - | hypothetical protein Acid345_2701 3194297 - 3192828 - | amino acid transporter Acid345_2702 3195095 - 3194403 - | cyclic nucleotide-binding protein TERM 2464 3195961 - 3195940 - g 95 -2.2 -5.80817 | opp_overlap 3195940 TGCAAGAGAAAAAAA CGATTGCG TTATCT CGTAACCG TATTCTCATCATCAA TERM 2465 3196056 - 3196041 - g 71 -10.4 -3.62864 | GAAATTGATCTCAAA CGCGGA ATCA TCCGCG TACCGCTCACCTCAC Acid345_2703 3195345 - 3196085 + | cyclic nucleotide-binding protein Acid345_2704 3196239 - 3196712 + | hypothetical protein Acid345_2705 3196915 - 3197256 + | hypothetical protein TERM 2466 3197857 - 3197876 + G 74 -11.4 -3.61715 | overlap 3197845 GGATCACGAGCGCCT CGCCGGGA TTGA TCCTGGCG TTCTTCGGAAGCCTG Acid345_2706 3197370 - 3198116 + | hypothetical protein Acid345_2707 3198128 - 3199492 + | hypothetical protein TERM 2467 3199547 - 3199509 - T 100 -16.9 -4.42386 | opp_overlap 3199518, overlap 3199518 TGCTCACCCAGAAAA GAGCAAAAAGCGGATGC TCGTC GCACCCGCTTTTTGCTG AGCGCGAACTATCTG TERM 2468 3199518 - 3199538 + T 90 -8.2 -4.72272 | opp_overlap 3199518 3199509 AGAAAAGAGCAAAAA GCGGATGC TCGTC GCACCCGC TTTTTGCTGAGCGCG TERM 2469 3199538 - 3199518 - T 100 -10.4 -4.99972 | opp_overlap 3199518, overlap 3199509 AGAAAAGAGCAAAAA GCGGATGC TCGTC GCACCCGC TTTTTGCTGAGCGCG Acid345_2708 3201256 - 3199556 - | type I phosphodiesterase/nucleotide pyrophosphatase TERM 2470 3201492 - 3201467 - R 100 -12.5 -5.81412 | overlap 3201469 TGCATTCAAAAAAAA TAGGGCGCCGG AGGT CCGACGCCCAA AGAATGCTGGTAAGG TERM 2471 3201490 - 3201469 - R 100 -15.1 -4.5536 | overlap 3201467 CATTCAAAAAAAATA GGGCGCCGG AGGT CCGACGCCC AAAGAATGCTGGTAA Acid345_2709 3202393 - 3201530 - | hypothetical protein TERM 2472 3202284 - 3202269 - G 86 -4.6 -5.24531 | ATGCCGTACAAAAAA CCGACG GCCG CACCGG ATGCCAGCGGCACGA Acid345_2710 3203642 - 3202401 - | radical SAM family Fe-S protein TERM 2473 3203654 - 3203672 + H 85 -6.7 -4.8543 | gap 1, overlap 3203655 TCATTCCATCTCCTT G-CCCGTG TGAT CACGGGTC TTTTTATGACAGTTC TERM 2474 3203655 - 3203670 + H 83 -10.4 -4.04397 | overlap 3203654 CATTCCATCTCCTTG CCCGTG TGAT CACGGG TCTTTTTATGACAGT TERM 2475 3204025 - 3204039 + G 71 -7 -4.24606 | opp_overlap 3204026, overlap 3204026 AGGTCGCAATAAAGA AGCCGG TTG CCGGCC TTTTACCTGTCGCTT TERM 2476 3204038 - 3204026 - g 82 -10.5 -4.20367 | opp_overlap 3204026 3204025 GGTCGCAATAAAGAA GCCGG TTG CCGGC CTTTTACCTGTCGCT TERM 2477 3204604 - 3204585 - g 80 -10.7 -3.95435 | opp_overlap 3204585 3204583, overlap 3204580 CGCGCGAAAAGAGAA GGGGCTC ATTCCG GAGCCCC TCTTGTTGGTAAAAC Acid345_2711 3203808 - 3204629 + | hypothetical protein Acid345_2712 3206135 - 3204630 - | cytochrome c family protein TERM 2478 3206206 - 3206175 - R 83 -10.1 -4.11216 | overlap 3206179 CCCTTATTTCCAAAA CTTACCGGCAGTG TGCGAG CACTGCCGGTGTG GCGAAATTCAACAAT TERM 2479 3206202 - 3206179 - R 79 -13.9 -2.75081 | overlap 3206175 TATTTCCAAAACTTA CCGGCAGTG TGCGAG CACTGCCGG TGTGGCGAAATTCAA Acid345_2713 3208206 - 3206230 - | cytochrome b subunit of formate dehydrogenase-like Acid345_2714 3208561 - 3208256 - | cytochrome c, class I TERM 2480 3208328 - 3208346 + g 73 -3.1 -4.78107 | overlap 3208315 3208329 CTTGCCCGCATACGC CGGCA TCTTGCCTT TGCCG TTTTTCGTGATCGTG Acid345_2715 3208881 - 3209558 + | hypothetical protein TERM 2481 3210829 - 3210814 - g 72 -4.6 -4.58685 | AAACTCTCCCAAAAA CCGGCA GGAA CACCGG GCCAGCAGATGTCGA TERM 2482 3211835 - 3211784 - g 73 -13 -2.73364 | gap 1, opp_overlap 3211781 3211781, overlap 3211803 CCGGTACCTCAAGCA TGTGGGTGACCGACGAG-AACGGCG GCA CGCCGGTGCTCGTCAGTCCGCCAAA AGACTTTACGCAGAC Acid345_2716 3209698 - 3212457 + | serine/threonine protein kinase Acid345_2717 3212516 - 3213928 + | beta-lactamase TERM 2483 3214945 - 3214908 - g 82 -13.4 -3.28119 | opp_overlap 3214941 ACTGAGCCAGATCAA CCACGACATCGTGCGC GCGCTG GCGAACGACGCCGCGG CCCTGATCGAGCACG Acid345_2718 3214087 - 3215688 + | serine phosphatase TERM 2484 3215753 - 3215779 + G 78 -8.6 -4.13767 | overlap 3215752 CCGCGGTGGATGTGT CTCGCTCGGCGG AAT TCTACGAGCGAG TTTTCGAATGGAACA Acid345_2719 3215692 - 3216060 + | glyoxalase/bleomycin resistance protein/dioxygenase Acid345_2720 3216686 - 3216057 - | hypothetical protein Acid345_2721 3218088 - 3216673 - | Iron-sulfur cluster binding protein Acid345_2722 3218813 - 3218085 - | hypothetical protein Acid345_2723 3221680 - 3218813 - | FAD linked oxidase-like TERM 2485 3220703 - 3220725 + g 81 -12.7 -3.53012 | opp_overlap 3220707 CGGCAACGTGCGCAA CGTAGCCGG CACGC CCGGCTGCG TTTCCACCGAGCGCA TERM 2486 3221577 - 3221550 - G 70 -2.7 -4.86001 | overlap 3221551 ATGAGCCGATAAAAA CTCGCATCG GAAGCGTAGG CGATGCGAT CGATGGGTCGAGTCA Acid345_2724 3221991 - 3222287 + | hypothetical protein TERM 2487 3222317 - 3222339 + T 80 -10.5 -3.84719 | opp_overlap 3222317 3222318, overlap 3222318 GCGCGCACACAAAAA CGCCTGGGC GTTCA GCCCAGGCA TTTCCATTTCAGAGT TERM 2488 3222339 - 3222317 - T 100 -12.7 -4.96848 | opp_overlap 3222317 3222318, overlap 3222318 GCGCGCACACAAAAA CGCCTGGGC GTTCA GCCCAGGCA TTTCCATTTCAGAGT TERM 2489 3222338 - 3222318 - T 95 -14 -3.57627 | opp_overlap 3222318 3222317, overlap 3222317 CGCGCACACAAAAAC GCCTGGGC GTTCA GCCCAGGC ATTTCCATTTCAGAG TERM 2490 3222318 - 3222338 + T 86 -14 -2.90349 | opp_overlap 3222317 3222318, overlap 3222317 CGCGCACACAAAAAC GCCTGGGC GTTCA GCCCAGGC ATTTCCATTTCAGAG Acid345_2725 3223019 - 3222366 - | putative lipoprotein Acid345_2726 3224526 - 3223171 - | undecaprenyl-phosphate galactosephosphotransferase Acid345_2727 3225739 - 3224534 - | glycosyl transferase, group 1 Acid345_2728 3226557 - 3225697 - | glycosyl transferase family protein Acid345_2729 3227861 - 3226578 - | hypothetical protein TERM 2491 3227182 - 3227161 - G 74 -6.5 -4.5442 | gap 1, overlap 3227162 GGCTGAAGTAGAAAA GCGGC-GAGC GTG GCTCCGCCGA TGGCTACTCCCACGG Acid345_2730 3228958 - 3227861 - | glycosyl transferase, group 1 Acid345_2731 3230139 - 3228955 - | lipopolysaccharide biosynthesis Acid345_2732 3232397 - 3230136 - | polysaccharide export protein TERM 2492 3234250 - 3234264 + G 71 -10 -3.57561 | ATATGCCATGGCCCG GAGCGA CCG TCGCTC TTTGCCAACTTAGGA Acid345_2733 3232610 - 3234277 + | hypothetical protein Acid345_2734 3234645 - 3235478 + | hypothetical protein Acid345_2735 3237519 - 3235489 - | Beta-N-acetylhexosaminidase TERM 2493 3236406 - 3236444 + g 74 -2.4 -4.89477 | gap 1, overlap 3236407 TCACCACATCCTTCG GCGTGTTCGGTTGGAGA ACCTCG TC-CCAGCCGACCATGA TTTTCTTGTTCGCGG Acid345_2736 3237650 - 3238204 + | rubrerythrin TERM 2494 3238226 - 3238275 + T 86 -13.1 -3.67068 | gap 1, opp_overlap 3238223 3238226 3238228 CTTAAACACGAAGGA CACGAAGTTCACGAA-GTTTTCGT AAA AAGAATTCCTTCGTGAACTTCGTG TTTAAAGATTTTGAT TERM 2495 3238275 - 3238226 - T 79 -13.1 -2.8742 | gap 1, opp_overlap 3238226, overlap 3238223 3238228 CTTAAACACGAAGGA CACGAAGTTCACGAA-GTTTTCGT AAA AAGAATTCCTTCGTGAACTTCGTG TTTAAAGATTTTGAT Acid345_2737 3238909 - 3238277 - | Ham1-like protein TERM 2496 3238433 - 3238415 - G 81 -3 -5.27335 | overlap 3238417 CTCCGGAAAGAAAAA CATCGGGT CGT AACCGAAG CCGTTTGATCCGCGC TERM 2497 3239602 - 3239620 + G 72 -9.6 -3.78934 | overlap 3239604 AGCCGCCTATGTCTT TACGACCA TTA TGGTCGTG TTGTTCTGGAAGGAA Acid345_2738 3239327 - 3240415 + | acyltransferase 3 TERM 2498 3240471 - 3240494 + T 91 -15.4 -3.06183 | overlap 3240474 GGGTCCTTCGACTGC GAACGCGGAA CGTT TTCCGCGTTC TTCGCTCAGGATGAC TERM 2499 3240474 - 3240491 + T 79 -11.3 -3.67775 | overlap 3240471 TCCTTCGACTGCGAA CGCGGAA CGTT TTCCGCG TTCTTCGCTCAGGAT Acid345_2739 3242254 - 3240500 - | aspartyl/asparaginyl beta-hydroxylase TERM 2500 3243096 - 3243070 - g 75 -12.3 -3.27298 | TCTCGCAAGCAGGAA TTCCGCGCCGA CGAAC TCGCCGCGGAA ATTGCCGGTCCGAAC Acid345_2740 3242401 - 3243933 + | peptidase M48, Ste24p TERM 2501 3243974 - 3243958 - f 73 -10.9 -3.31792 | CGAGGAGCTTGAGAA GTTTGCG GAT CGCAAAC AAACTGCCCGACTCG TERM 2502 3244075 - 3244098 + F 70 -6.6 -4.21408 | CAAGCTGTACCCGTC TGGCTGCCCT CCCC GGGGCGGCAA TTTGCTTTTACAGTT Acid345_2741 3244127 - 3246541 + | hypothetical protein TERM 2503 3247294 - 3247281 - g 70 -3.8 -4.59853 | GGAACTGCGGAAAAA GCGA TGCTGC TCGC CAAAGAAGCGTTGAT Acid345_2742 3246684 - 3248195 + | fumarase Acid345_2743 3248734 - 3248384 - | anti-sigma-factor antagonist TERM 2504 3248988 - 3248941 - R 100 -21.5 -3.85817 | opp_overlap 3248943 3248984, overlap 3248943 3248946 ATCTTCTGGCACAAA CACAAGAGCGGGACAGAACGC CCTGAC ACGTTCTGCCCCGCTCTTGTT TCTTACAATTTCAGC TERM 2505 3248943 - 3248986 + r 100 -21.2 -4.23104 | opp_overlap 3248941 3248943 3248946, overlap 3248984 CTTCTGGCACAAACA CAAGAGCGGGACAGAACG CCCTGACA CGTTCTGCCCCGCTCTTG TTTCTTACAATTTCA TERM 2506 3248986 - 3248943 - R 100 -24.1 -3.51934 | opp_overlap 3248943 3248984, overlap 3248941 3248946 CTTCTGGCACAAACA CAAGAGCGGGACAGAACGC CCTGAC ACGTTCTGCCCCGCTCTTG TTTCTTACAATTTCA TERM 2507 3248983 - 3248946 - R 100 -20 -3.89695 | opp_overlap 3248943, overlap 3248943 3248941 CTGGCACAAACACAA GAGCGGGACAGAACGC CCTGAC ACGTTCTGCCCCGCTC TTGTTTCTTACAATT Acid345_2744 3251283 - 3249004 - | hypothetical protein TERM 2508 3251134 - 3251148 + g 72 -9.2 -3.63805 | GAAAGTGATGCCGAC GGTGCC GGT GGCGCC TTTGACCTGTCCGCT Acid345_2745 3252125 - 3251412 - | peptidase M15D, vanX D-ala-D-ala dipeptidase Acid345_2746 3253217 - 3252261 - | acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha TERM 2509 3253283 - 3253297 + r 78 -7.1 -4.56597 | TCCAGTAATCAACGG CCGGA AGGAG TCCGG TTTTTACCAGCGGGG Acid345_2747 3256853 - 3253374 - | DNA polymerase III, alpha subunit Acid345_2748 3257290 - 3256940 - | hypothetical protein Acid345_2749 3257360 - 3257902 + | GCN5-related N-acetyltransferase Acid345_2750 3257960 - 3258499 + | hypothetical protein TERM 2510 3258533 - 3258509 - T 100 -11.5 -5.68023 | opp_overlap 3258509 CGATAATCAAAAAAA TCCCCATGC GCAGAAT GCATGGGGA TTTCCTACACTTGCG TERM 2511 3258509 - 3258533 + T 83 -12.2 -3.76492 | opp_overlap 3258509 CGATAATCAAAAAAA TCCCCATGCG CAGAA TGCATGGGGA TTTCCTACACTTGCG Acid345_2751 3259963 - 3258554 - | hypothetical protein Acid345_2752 3260076 - 3260570 + | hypothetical protein thiH 3261964 - 3260567 - | thiamine biosynthesis protein ThiH TERM 2512 3263080 - 3263096 + G 78 -4.3 -5.01732 | opp_overlap 3263046 TCCCGGTCGCGACGG CGGCACT CGC GGTACCG TTTTTTGCAGCGCTT Acid345_2754 3262059 - 3263516 + | hypothetical protein Acid345_2755 3264625 - 3263513 - | hypothetical protein Acid345_2756 3264912 - 3264622 - | hypothetical protein TERM 2513 3264972 - 3264944 - R 95 -11.7 -4.42062 | opp_overlap 3264947, overlap 3264945 3264947 GAGGCTGCAAACAAA TTAGGCGGATGGA AGA TCCATCCGCCTCT GTCCGGAGAGACAGG TERM 2514 3264971 - 3264945 - R 95 -15.2 -3.24755 | opp_overlap 3264947, overlap 3264944 3264947 AGGCTGCAAACAAAT TAGGCGGATGGA AGA TCCATCCGCCTC TGTCCGGAGAGACAG TERM 2515 3264969 - 3264947 - R 100 -17.8 -3.18452 | opp_overlap 3264947, overlap 3264945 3264944 GCTGCAAACAAATTA GGCGGATGGA AGA TCCATCCGCC TCTGTCCGGAGAGAC TERM 2516 3264947 - 3264969 + r 95 -17.8 -2.87132 | opp_overlap 3264945 3264944 3264947 GCTGCAAACAAATTA GGCGGATGGA AGA TCCATCCGCC TCTGTCCGGAGAGAC Acid345_2757 3266232 - 3264991 - | ABC efflux pump, inner membrane subunit TERM 2517 3266176 - 3266201 + g 73 -11.1 -3.4647 | gap 1, overlap 3266133 3266174 3266197 CATGGTGAGTGCGGT GCGCCG-GCGGT TGT GCCGCATGGCGC TGTTTGCCTGTTGAA Acid345_2758 3267484 - 3266237 - | ABC efflux pump, inner membrane subunit Acid345_2759 3267674 - 3268171 + | hypothetical protein Acid345_2760 3268210 - 3268746 + | hypothetical protein Acid345_2761 3269589 - 3268753 - | 3-hydroxybutyryl-CoA dehydrogenase TERM 2518 3268779 - 3268835 + g 72 -6.5 -4.39828 | gap 1, opp_overlap 3268811, overlap 3268780 CAGCCAAGGCTCGTT TGTTCGCTTTGACGTACTGCTCCAGC AGAGGA GC-GGGGCGGTACGTCTCGCCGAGCG TTTTGTGAAGGTATT TERM 2519 3269526 - 3269509 - G 71 -10.5 -3.54919 | AAGGATGGTGCGAAA GCCGCCA ACTG CGGCGGC CTGCGCGATGCTGCG Acid345_2762 3269779 - 3269582 - | hypothetical protein TERM 2520 3271162 - 3271187 + Gr 77 -7.5 -4.24342 | opp_overlap 3271137 3271140, overlap 3271173 TTCGGACAGCGCGAC TGGGGCGGTCC GAGC GCACCGCTCTA TTTATTGGTCGAGAA TERM 2521 3271173 - 3271185 + Gr 70 -9.1 -3.72374 | opp_overlap 3271140, overlap 3271162 CGACTGGGGCGGTCC GAGCG CAC CGCTC TATTTATTGGTCGAG Acid345_2764 3274458 - 3272905 - | 4-alpha-glucanotransferase Acid345_2763 3269935 - 3272958 + | malto-oligosyltrehalose synthase TERM 2522 3274565 - 3274541 - TR 100 -19.3 -4.88918 | TCATTCTAAACAAAA TCGCGGCCGGC ATT GCCGACCGCGA CCGTAAAGCATTGTG Acid345_2765 3276551 - 3274587 - | PpiC-type peptidyl-prolyl cis-trans isomerase TERM 2523 3277229 - 3277196 - g 70 -3.9 -4.57569 | gap 1 CGACGTCTCCAAAAA GAGCTTGAAGGTCCTC GAC AAGAAACTCCA-GCTC CTCTCCGAACACGCC TERM 2524 3277457 - 3277439 - g 70 -4.5 -4.42619 | CAAGACGCTAGAAAA GAAGAGC TACTC GCGCTTC AATCACTTCCAGAAC Acid345_2766 3276747 - 3277769 + | radical SAM family Fe-S protein Acid345_2767 3278674 - 3278126 - | carbonic anhydrase Acid345_2768 3278969 - 3279361 + | hypothetical protein Acid345_2769 3279789 - 3279388 - | hypothetical protein Acid345_2770 3279980 - 3281164 + | amino acid aldolase or racemase-like Acid345_2771 3281195 - 3281443 + | hypothetical protein Acid345_2772 3281691 - 3283406 + | sodium/hydrogen exchanger Acid345_2773 3283648 - 3284226 + | hypothetical protein Acid345_2774 3284543 - 3284989 + | hypothetical protein TERM 2525 3285786 - 3285809 + G 72 -4.4 -4.56914 | opp_overlap 3285780 3285785, overlap 3285787 TTGACAGCACGAACG CCGGCTCGCT TGGT AGCGTGTCGC TTTTGATTTCCGTAC Acid345_2775 3285161 - 3288709 + | hypothetical protein TERM 2526 3288924 - 3288938 + F 85 -4.2 -5.14563 | AAATATGGTAAACGT CCGG TCTGTCC CCGG TTTTTTCCTGGCAGG Acid345_2776 3290270 - 3290977 + | hypothetical protein Acid345_2777 3291217 - 3291651 + | hypothetical protein Acid345_2778 3291773 - 3292123 + | hypothetical protein TERM 2527 3292589 - 3292608 + GF 77 -11.4 -3.49209 | opp_overlap 3292578 3292586 3292583, overlap 3292592 AGCACGCAACTACAT GAGCGGCG CATA CGCCGTTC TTGTGACTTTGCTCT TERM 2528 3292592 - 3292605 + GF 76 -9.5 -3.86995 | opp_overlap 3292578 3292586 3292583, overlap 3292589 ACGCAACTACATGAG CGGCG CATA CGCCG TTCTTGTGACTTTGC Acid345_2779 3292095 - 3292694 + | hypothetical protein TERM 2529 3294335 - 3294318 - g 80 -10.5 -4.0896 | overlap 3294306 AAAGGCGTTTTAAAA GCCGGCG CCGA CGCCGAC ATCCTGGTGATGAAC Acid345_2780 3293229 - 3294398 + | N-acetylglucosamine 6-phosphate deacetylase TERM 2530 3294649 - 3294681 + F 83 -8.6 -4.39828 | gap 2, opp_overlap 3294647, overlap 3294653 AGGGTACAAGCCATA GG--GAGGACTAGAGC ACA GCTCTAGTCCTTTACC TTTTGTGGCGATATT TERM 2531 3294653 - 3294675 + F 100 -16.4 -3.96705 | opp_overlap 3294647, overlap 3294649 TACAAGCCATAGGGA GGACTAGAGC ACA GCTCTAGTCC TTTACCTTTTGTGGC TERM 2532 3295213 - 3295202 - g 84 -7.2 -4.77567 | overlap 3295203 AGTGGGAGAAGAAAA CCGC AGAC GCGG CGACAAAGGAAGAGA TERM 2533 3295452 - 3295471 + G 74 -7.8 -4.18018 | TTCGAACCAGATATC GCAGGTGC TGAT GAACCTGC TTTTGAATGCGGCGC Acid345_2781 3294838 - 3295803 + | histidine kinase TERM 2534 3296258 - 3296243 - g 77 -11.8 -3.60098 | AGTGGTGACGCGAAA CGCCGC GCTG GCGGCG ATGCTGGAGCAGGCC Acid345_2782 3295803 - 3297194 + | two component, sigma54 specific, Fis family transcriptional regulator Acid345_2783 3297447 - 3297767 + | tRNA pseudouridine synthase C Acid345_2784 3297896 - 3298150 + | glutaredoxin TERM 2535 3298144 - 3298154 + T 74 -3.2 -4.83615 | GCTTCTCGGCGTAAG TTCG TAA CGAG TTTTTGTACAAGCTC TERM 2536 3298201 - 3298228 + T 100 -12 -5.61824 | opp_overlap 3298195, overlap 3298202 CGCATAGCACCTCCT GTCCGGCGGATT GCCA AGTCCGCCGGAA TTTTTTTGCCTTTTC TERM 2537 3298202 - 3298227 + T 100 -15.5 -3.94654 | opp_overlap 3298195, overlap 3298201 GCATAGCACCTCCTG TCCGGCGGATT GCCA AGTCCGCCGGA ATTTTTTTGCCTTTT Acid345_2785 3299103 - 3298450 - | hypothetical protein Acid345_2786 3299507 - 3299103 - | protein-methionine-S-oxide reductase Acid345_2787 3299603 - 3300367 + | carboxymethylenebutenolidase Acid345_2788 3300411 - 3300818 + | hypothetical protein TERM 2538 3301692 - 3301705 + G 76 -3.1 -4.95155 | gap 1, overlap 3301688 CGCCAACACTTTCCG CA-CCG CAG CGGATG TTTTTGTCGTGTGAC Acid345_2789 3300823 - 3301719 + | histone deacetylase superfamily protein TERM 2539 3302063 - 3302033 - T 91 -7.5 -5.07652 | overlap 3302035 TTGCTGAAAACAAAA TATAGGGGGGAGG GGGTA CCCCCTCCCTAAA ACCTATTTCCGCTTC TERM 2540 3302061 - 3302035 - T 83 -10.1 -4.16397 | overlap 3302033 GCTGAAAACAAAATA TAGGGGGGAGG GGGTA CCCCCTCCCTA AAACCTATTTCCGCT Acid345_2790 3303490 - 3302066 - | dihydrolipoamide dehydrogenase Acid345_2791 3305352 - 3303505 - | dihydrolipoamide acetyltransferase TERM 2541 3304059 - 3304081 + g 78 -9.1 -4.11692 | CCGCGGCTTCGGCTT GCTTCGCGA ACTTC TCGCGCAGC TTTTCGAGCTCGGTG TERM 2542 3304459 - 3304490 + g 81 -8.6 -4.28774 | opp_overlap 3304460 3304464, overlap 3304460 CCGCACGCCAAGATC ACGAACGTCGGGCG GATG CGCCTCGCGTTCGG TTTTGCCTTCGCTGC TERM 2543 3304460 - 3304489 + g 73 -12.1 -3.16783 | opp_overlap 3304460 3304464, overlap 3304459 CGCACGCCAAGATCA CGAACGTCGGGCG GATG CGCCTCGCGTTCG GTTTTGCCTTCGCTG TERM 2544 3304614 - 3304583 - G 88 -14.4 -3.61398 | opp_overlap 3304585, overlap 3304585 GCGGTCGCGGAAGAA GATCCACCGCCGCC AGTG GGCGGCTGTGGATT GCCTTCGGTGTTGGA TERM 2545 3304612 - 3304585 - G 90 -17 -3.38812 | opp_overlap 3304585, overlap 3304583 GGTCGCGGAAGAAGA TCCACCGCCGCC AGTG GGCGGCTGTGGA TTGCCTTCGGTGTTG TERM 2546 3304585 - 3304612 + g 90 -17 -3.20878 | opp_overlap 3304585 3304583 GGTCGCGGAAGAAGA TCCACCGCCGCC AGTG GGCGGCTGTGGA TTGCCTTCGGTGTTG aceE 3308046 - 3305365 - | pyruvate dehydrogenase subunit E1 TERM 2547 3305528 - 3305509 - G 72 -9.2 -3.63694 | opp_overlap 3305508 ATCGACCTCGAAGAA GTCGCGCA ACGA TGCGCGGC CTTCGCTGCGGCCGA TERM 2548 3305649 - 3305635 - G 85 -11.4 -3.95153 | opp_overlap 3305635, overlap 3305617 GGAAGCAGCGACAAA GACGCC TTC GGCGTC TTTCAACTGCTCGCC TERM 2549 3305635 - 3305649 + g 74 -11.4 -3.62096 | opp_overlap 3305635 3305617 GGAAGCAGCGACAAA GACGCC TTC GGCGTC TTTCAACTGCTCGCC Acid345_2793 3308178 - 3309338 + | aminotransferase Acid345_2794 3309576 - 3309322 - | hypothetical protein TERM 2550 3309667 - 3309646 - R 100 -15.9 -5.96219 | CAGCGACAAAAAAAA GGCGGAGCA TTTC TGCTCCGCC GAAATCACATCATTC Acid345_2795 3310538 - 3309693 - | ferredoxin--NADP(+) reductase subunit alpha Acid345_2796 3311968 - 3310535 - | sulfide dehydrogenase (flavoprotein) subunit SudA TERM 2551 3311310 - 3311325 + g 71 -10.4 -3.60792 | AGGGTCACGCTATTG CCGACG ATGA CGTCGG TTTCGAACTTCACGC Acid345_2797 3312268 - 3313161 + | ABC transporter, ATPase subunit TERM 2552 3314066 - 3314054 - g 71 -7.7 -3.97139 | GAAGCGTAAGAAGAA GGAAG AGA CTTCC GGCAAGTGGGAGACG Acid345_2798 3313158 - 3314786 + | hypothetical protein TERM 2553 3314893 - 3314861 - T 71 -4.8 -4.65838 | opp_overlap 3314868, overlap 3314868 GACATATCTCAAAAA TGACAAAGCACGCC ACTTG GGCGTGCTTTTTGT TTGAGCTTGCGCAGA TERM 2554 3314886 - 3314868 - T 93 -11.7 -4.2687 | opp_overlap 3314868, overlap 3314861 CTCAAAAATGACAAA GCACGCC ACTTG GGCGTGC TTTTTGTTTGAGCTT TERM 2555 3314868 - 3314886 + T 100 -11.7 -5.29846 | opp_overlap 3314868 3314861 CTCAAAAATGACAAA GCACGCC ACTTG GGCGTGC TTTTTGTTTGAGCTT Acid345_2799 3315173 - 3314913 - | 4Fe-4S ferredoxin, iron-sulfur binding Acid345_2800 3315787 - 3315275 - | hypothetical protein Acid345_2801 3316350 - 3315790 - | hypothetical protein TERM 2556 3315975 - 3315985 + g 80 -4.6 -4.99435 | opp_overlap 3315953 ACGCACGCTGCGTAT TGGC AGT GCCG TTTTTGATTATTGGA TERM 2557 3316143 - 3316156 + g 72 -5.9 -4.52873 | CCGGAGTGGCATCCA CGCGG ACTT TCGCG TTCTTTTTCTGGGCG TERM 2558 3316290 - 3316260 - G 75 -10.5 -3.75153 | gap 1, opp_overlap 3316266, overlap 3316261 GGGCCGCAATGCAAA CGCGAATGGGAGCG TTGG CGCTCCCATTGG-G TGAGTCGGATTGTGC TERM 2559 3316266 - 3316285 + g 79 -13.6 -3.07935 | opp_overlap 3316260 3316261 CAATGCAAACGCGAA TGGGAGCG TTGG CGCTCCCA TTGGGTGAGTCGGAT Acid345_2802 3317303 - 3316383 - | hypothetical protein TERM 2560 3316863 - 3316883 + g 78 -9 -4.13767 | gap 1 GTCGCCGGCAGCCGC GGCCATGGC GTCG GCC-TGGCC TTTTGGCATCGCGAA Acid345_2803 3318588 - 3317392 - | phosphoserine phosphatase SerB Acid345_2804 3318764 - 3321781 + | surface antigen (D15) TERM 2561 3323494 - 3323470 - g 74 -7.7 -4.183 | GCAACTGCGAACAAA CGTGGCGCTCA GTC CGAGCGGCGCG GCCCTGCGCAATGGT Acid345_2805 3321818 - 3325771 + | hypothetical protein Acid345_2806 3325918 - 3326532 + | flavodoxin/nitric oxide synthase Acid345_2807 3326581 - 3329025 + | glucan 1,4-alpha-glucosidase TERM 2562 3329111 - 3329098 - g 74 -8.1 -4.18018 | CGGCGTTAGCGAAAA GCAGG AAGA CCTGC TCGCGATCAACACGA Acid345_2808 3329015 - 3331108 + | transketolase Acid345_2809 3331113 - 3331562 + | ribose-5-phosphate isomerase B TERM 2563 3331696 - 3331674 - g 71 -7.6 -4.01158 | AAGCTGATTAAAGAA GACGGCCTGC GCG GCATGACGTC GAACCCAACAATTTT Acid345_2810 3331566 - 3334442 + | bifunctional transaldolase/phosoglucose isomerase TERM 2564 3334450 - 3334472 + F 93 -12 -4.34345 | opp_overlap 3334444 3334449 GCAAGTAAATCCAAC GGGCCGCT GAATCAA AGCGGCCC TTTTCATCATCTCTG TERM 2565 3335792 - 3335819 + G 83 -13.4 -3.44527 | CGTGGTGCAGACCGC CGCTGGGCTCGG AATT CCGACTCCAGCG TTCTCGTCGTCGCTC Acid345_2811 3334536 - 3335984 + | 6-phosphogluconate dehydrogenase (decarboxylating) Acid345_2812 3335997 - 3337541 + | glucose-6-phosphate 1-dehydrogenase Acid345_2813 3337543 - 3338379 + | Cof protein TERM 2566 3338504 - 3338479 - g 73 -11.1 -3.38224 | overlap 3338477 AGCTGATTGCAAAGA GCGCGCAGGAA GCGA TTGCCGCGCGC GGACGCTTTACGATT TERM 2567 3338884 - 3338908 + G 75 -4.2 -4.71828 | overlap 3338886 GTCCGACGCTCGAAA TTCGCAACCG ACTGG TGGTGGCGGA TTTTATTCCTGAAGT Acid345_2814 3338376 - 3339134 + | 6-phosphogluconolactonase TERM 2568 3339596 - 3339582 - g 72 -6.4 -4.3739 | opp_overlap 3339586, overlap 3339585 3339586 CAGTTCTGCACAAAA GAAGGC CTG ACCTTC AAGCTGCTTGCCGAT Acid345_2815 3339273 - 3339794 + | alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen TERM 2569 3339809 - 3339836 + F 76 -9.1 -3.95435 | opp_overlap 3339807 3339806, overlap 3339807 3339806 GTTGCCTCGAAATTC GGGAGGGGGTA CCCCCC TCCCCCCTCTC TTGTGTTTTCAGCAA Acid345_2816 3340513 - 3341673 + | NHL repeat-containing protein TERM 2570 3341679 - 3341700 + T 71 -10.1 -3.53343 | opp_overlap 3341683 GGCACATTGATGGCA GACAGGGGC TAAA GCCCGTGTC TTTAGCGGAGCGGTT TERM 2571 3341886 - 3341859 - T 71 -7.7 -4.07133 | gap 1, opp_overlap 3341859 3341863 GAGTTCGAGAAAGAA CGAAGGCGGGCC ATGAA GGCC-GCCTTTG GTTTGGTAGAAGGCG TERM 2572 3341863 - 3341882 + T 70 -7.1 -4.10552 | gap 1, opp_overlap 3341859, overlap 3341859 TCGAGAAAGAACGAA GGCGGGCC ATGAA GGCC-GCC TTTGGTTTGGTAGAA Acid345_2817 3345037 - 3341906 - | hydrophobe/amphiphile efflux-1 HAE1 TERM 2573 3342214 - 3342230 + g 73 -3 -4.72272 | gap 1, overlap 3342217 ACTGCTCGGCAAATT CGACGAT TAAG ATCG-CG TTTTTGCTGGCGAGA TERM 2574 3342323 - 3342305 - G 71 -11.6 -3.18264 | CTGGCCACGGAGGAA CTGCGCGC CAA GCGCGCCG AAGATGGCCATGGGC TERM 2575 3343103 - 3343138 + g 74 -6.8 -4.4078 | AAGCGGGCCGCGTAC GGAATTCAGGACGGCG GCTG CGGTGTGCTGATTTCC TTTTCGTTCACCGAA Acid345_2818 3346183 - 3345053 - | secretion protein HlyD TERM 2576 3348492 - 3348482 - g 74 -6.8 -4.37886 | CGACTGGCGACAAAA CAGC CGA GCTG AACAAGTTGCTCATC Acid345_2819 3346492 - 3348765 + | glutamate carboxypeptidase II TERM 2577 3348806 - 3348784 - f 100 -9.1 -4.84527 | opp_overlap 3348787, overlap 3348787 CTCACACAGTAAAAA TAAGGGGCC GTATT GGCCCCTTT TTTGTTGCTCCGTTA TERM 2578 3348787 - 3348803 + F 100 -11.5 -5.5112 | opp_overlap 3348784 3348787 ACACAGTAAAAATAA GGGGCCG TAT TGGCCCC TTTTTTGTTGCTCCG TERM 2579 3348803 - 3348787 - f 93 -10.8 -4.51891 | opp_overlap 3348787, overlap 3348784 ACACAGTAAAAATAA GGGGCC GTATT GGCCCC TTTTTTGTTGCTCCG TERM 2580 3350267 - 3350251 - g 75 -12.3 -3.18383 | opp_overlap 3350248 3350251 ATGGTGAGCGACCAA CGCTTCG CTT CGAAGCG AACCGATGTTCTGAC Acid345_2820 3348877 - 3350793 + | peptidase S15 Acid345_2821 3350850 - 3351563 + | ABC transporter, ATPase subunit Acid345_2822 3351547 - 3352335 + | ABC transporter, inner membrane subunit TERM 2581 3352873 - 3352863 - g 77 -2.4 -5.06816 | AGTGCTGAAGAAAAA CGGC ATC GACG TGAAGGGCAAGATCG Acid345_2823 3352354 - 3354492 + | glutamate carboxypeptidase II Acid345_2824 3355628 - 3354489 - | geranylgeranyl reductase Acid345_2825 3356597 - 3355638 - | putative esterase Acid345_2826 3357968 - 3356607 - | cell division protein FtsX TERM 2582 3357096 - 3357072 - G 74 -11.5 -3.48153 | opp_overlap 3357069 ATCAAGAATCGAGAA CGTGGAGAAAC CGA GTTTCTTCACG CCGTCTTCCACCTGC TERM 2583 3357259 - 3357248 - G 76 -7.2 -4.45664 | overlap 3357249 3357250 TCAACGGAACGAAAA CCCG GGCG CGGG CGGCGGCGCGCATGG Acid345_2827 3358711 - 3357965 - | ABC transporter, ATPase subunit Acid345_2828 3360632 - 3358776 - | ABC transporter, ATPase subunit Acid345_2829 3360937 - 3362238 + | secretion protein HlyD TERM 2584 3364925 - 3364884 - g 78 -6.6 -4.60889 | gap 2, overlap 3364872 3364871 3364886 AACCAGGCCCAAAAA GACCTGAACATGCCGCTCAG CGTT CAG-GCGGCAT-TCCAGGGC ACAGCGGCTTCCTTC Acid345_2830 3362235 - 3365513 + | acriflavin resistance protein TERM 2585 3365561 - 3365606 + G 75 -5.9 -4.61231 | TCCGGTAGCCACCAC GCTGATCACCATCGCGATCGC GTTG GCGGGTGCGGTGGCCTTCGGC TTTTTACCGATCTCA Acid345_2831 3365517 - 3368615 + | acriflavin resistance protein TERM 2586 3369011 - 3368997 - g 71 -11.4 -3.29511 | CGTACTTCCCTACAA TCGGCG TCT CGCCGA GCATCACCGCAACCC Acid345_2832 3368630 - 3370192 + | RND efflux system, outer membrane lipoprotein, NodT Acid345_2833 3370372 - 3371718 + | UDP-glucose/GDP-mannose dehydrogenase TERM 2587 3371863 - 3371874 + T 81 -2.2 -5.40072 | gap 1, overlap 3371863 TTTCGTGGTAACGGT C-CGG CCC CCGCG TTTTTTTCCCAGAAC TERM 2588 3371904 - 3371918 + T 72 -2.1 -4.87665 | gap 1, opp_overlap 3371890 3371889 CCGCGACGAATGGCG TCC-CG AGCG CGAGGA TTTTTCTAAATCGCG TERM 2589 3372021 - 3372045 + T 100 -13.6 -4.87133 | opp_overlap 3372017 3372015 3372021 GACTGAAAACACGAA TGGCCAGCCT CGAAT GGGCTGGCCA TTTTCTTTGCAAAGT TERM 2590 3372045 - 3372021 - T 85 -12.9 -3.5485 | opp_overlap 3372021, overlap 3372017 3372015 GACTGAAAACACGAA TGGCCAGCC TCGAATG GGCTGGCCA TTTTCTTTGCAAAGT Acid345_2834 3372565 - 3372062 - | hypothetical protein Acid345_2835 3373586 - 3372630 - | hypothetical protein Acid345_2836 3374847 - 3373576 - | hypothetical protein TERM 2591 3374680 - 3374668 - G 72 -4.8 -4.60924 | GAAAGTCTCGAAAAA CCAC GTGGT GTGG GCGAGGTGCCACTTT TERM 2592 3374851 - 3374870 + H 72 -3.6 -4.72272 | gap 1 TCGTTCGCTCATAGC CTGC-TCTT AAT AAGATGCGG TTTTTGCTCGAAAGA Acid345_2837 3375117 - 3375893 + | nucleotidyl transferase TERM 2593 3376663 - 3376618 - g 70 -2.5 -4.83615 | CACGGTCGATAAAAA GTTGATTGGCTCGGCGTTTAA TTTT TCGAACGAAGCGCAAATCAAC GTACTCGACCTGGTG Acid345_2838 3375890 - 3376864 + | NAD-dependent epimerase/dehydratase TERM 2594 3377365 - 3377342 - g 72 -6.6 -4.40804 | overlap 3377343 CACGATCCGACAAAA CGCGCGCGGT GATG ATCGCGCACA CGCTGGGCAATCCTT Acid345_2839 3376864 - 3378213 + | DegT/DnrJ/EryC1/StrS aminotransferase Acid345_2840 3378216 - 3379253 + | NAD-dependent epimerase/dehydratase Acid345_2841 3379370 - 3380272 + | N-acetylneuraminate synthase Acid345_2842 3380269 - 3380748 + | phosphatase kdsC Acid345_2843 3380777 - 3382558 + | thiamine pyrophosphate enzyme-like TPP bindin Acid345_2844 3382600 - 3383538 + | methyltransferase FkbM Acid345_2845 3384762 - 3383539 - | methyltransferase FkbM Acid345_2846 3385561 - 3384740 - | short-chain dehydrogenase/reductase SDR Acid345_2847 3386608 - 3385571 - | oxidoreductase Acid345_2848 3387453 - 3386605 - | xylose isomerase-like TIM barrel TERM 2595 3387416 - 3387392 - G 78 -9.9 -4.07568 | CGCGCGCGCGGAAAA CTCTGGAACCG GCC CGGTTCCGGTG GCACTAGTCGTCCCT Acid345_2849 3387584 - 3388582 + | glycosyl transferase family protein Acid345_2850 3388579 - 3389598 + | hypothetical protein Acid345_2851 3391703 - 3389595 - | hypothetical protein TERM 2596 3389888 - 3389868 - G 75 -10.3 -3.73775 | opp_overlap 3389870 CGGATCGCCACCAAA GCCGGTGCC GCA GGCCCCGAC CCCGGCAACCGTCTG TERM 2597 3391813 - 3391803 - R 91 -2.4 -5.85244 | overlap 3391806 3391808 AACCAAAACAAAAAA GGAG ATG CGCC TAGCGCACAAGAAGT Acid345_2852 3392769 - 3391813 - | peptidase M48, Ste24p Acid345_2853 3393212 - 3392766 - | CopY family transcriptional regulator Acid345_2854 3393342 - 3395132 + | amidase Acid345_2855 3398726 - 3395745 - | protein translocase subunit secA TERM 2598 3396585 - 3396615 + g 78 -11.1 -3.7282 | gap 1 ACCTTCGAGGAGTTG GCGGCGCA-GGCCG TAAA CGGCCATACGCTGC TTGTTCATCACGTCG TERM 2599 3397368 - 3397392 + g 76 -2.8 -5.0065 | gap 1, overlap 3397370 CACTGAGAGCTTGGC GATC-TCGTCG GCAA CGGCGAAGAAC TTTTCTTTCTCGGTG Acid345_2856 3398977 - 3399672 + | hypothetical protein TERM 2600 3399701 - 3399672 - T 83 -14.4 -2.78547 | opp_overlap 3399677, overlap 3399677 GGATGCGATGAATTA GAAAAGCTCCCC GACTGA GGGGAGCTTTCC GTCGAACTTGTAAAT TERM 2601 3399677 - 3399696 + T 76 -10.7 -3.65827 | opp_overlap 3399677 3399672 CGATGAATTAGAAAA GCTCCCC GACTGA GGGGAGC TTTCCGTCGAACTTG TERM 2602 3399696 - 3399677 - T 95 -10.7 -4.56607 | opp_overlap 3399677, overlap 3399672 CGATGAATTAGAAAA GCTCCCC GACTGA GGGGAGC TTTCCGTCGAACTTG Acid345_2857 3400309 - 3399716 - | hypothetical protein TERM 2603 3402912 - 3402888 - g 75 -5.5 -4.62302 | overlap 3402878 3402890 GAAGACCTTCAAAAA GGGCGCGGCCA TCC TCGCAGCGCAC CTCCAAGTGCCCATC Acid345_2858 3400408 - 3403164 + | AMP-dependent synthetase and ligase Acid345_2859 3403865 - 3403167 - | response regulator receiver protein Acid345_2860 3404826 - 3403924 - | tyrosine recombinase XerC subunit Acid345_2861 3405764 - 3404823 - | tyrosine recombinase XerD subunit TERM 2604 3405073 - 3405098 + g 74 -11.1 -3.53012 | overlap 3405074 ACCATTTGCCAGACC CGCTGCCGCGA CAGT TTGCGGCAGCC TTTGCCCACGAACAG TERM 2605 3405074 - 3405097 + g 80 -14.6 -2.71712 | overlap 3405073 CCATTTGCCAGACCC GCTGCCGCGA CAGT TTGCGGCAGC CTTTGCCCACGAACA Acid345_2862 3406570 - 3405815 - | hypothetical protein TERM 2606 3405911 - 3405887 - G 72 -8.5 -3.90922 | opp_overlap 3405867 3405905 ATCGTGTTTAAAGAA CGCGAAGACCG TTT CGACTTTCGCG CGCGAAGCTTTCACT TERM 2607 3406353 - 3406331 - G 72 -6.2 -4.31904 | opp_overlap 3406331 3406330 ACAAACGAAGAGAAA GGATTCCGGA GTT TCCGCGATCC ATTTCAGCGCCGTCT Acid345_2863 3407625 - 3406567 - | DNA primase-like Acid345_2864 3407815 - 3408540 + | hypothetical protein TERM 2608 3408669 - 3408632 - g 71 -11.1 -3.29471 | opp_overlap 3408628 TCGCGAGCAGATGAA CCGCGTGCGCGAGGAGG CGGA CATCCTCGTGCTCGCCG GCGATCTTACAAACT Acid345_2865 3408561 - 3409268 + | metallophosphoesterase Acid345_2866 3409383 - 3410681 + | metal dependent phosphohydrolase TERM 2609 3411474 - 3411494 + G 76 -12.5 -3.14132 | CGCGAAGCTGTGCTC GCCATGCGG AAC CCGCAAGGC TTGGTGGAAGACGAA TERM 2610 3412707 - 3412695 - g 74 -6.9 -4.35483 | overlap 3412704 GCCGACGACAACAAA CGCGC ACA ACGCG AGGGACTGCTGGCGG Acid345_2867 3410763 - 3412760 + | hypothetical protein Acid345_2868 3412766 - 3414007 + | hypothetical protein Acid345_2869 3414807 - 3414004 - | prolipoprotein diacylglyceryl transferase TERM 2611 3415044 - 3415032 - R 76 -3.3 -5.0133 | TATCGGTTCAAAAAA CGGTT GCC ATCCG TCACCAACTTTGCAG Acid345_2870 3416368 - 3415163 - | hypothetical protein Acid345_2871 3417377 - 3416505 - | hypothetical protein Acid345_2872 3417577 - 3417831 + | SSU ribosomal protein S16P Acid345_2873 3418005 - 3418259 + | RNA-binding protein TERM 2612 3418502 - 3418492 - g 87 -6.8 -4.88736 | GACGACGCAGAAAAA CTGC TTC GCAG CGAGGTTCAGATTCC Acid345_2874 3418237 - 3418866 + | 16S rRNA processing protein RimM Acid345_2875 3418863 - 3419657 + | tRNA (Guanine37-N1) methyltransferase rplS 3419676 - 3420023 + | 50S ribosomal protein L19 Acid345_2877 3420699 - 3420085 - | hypothetical protein TERM 2613 3420660 - 3420641 - G 71 -7.8 -4.0274 | overlap 3420642 GCCACTACGAAACAA CCCGCGAT GAGG ATCGCGGT ACGTCGAACTCGGGC Acid345_2878 3420785 - 3421549 + | RNase HII Acid345_2879 3422193 - 3421546 - | hypothetical protein TERM 2614 3422228 - 3422241 + H 83 -8.1 -4.4078 | opp_overlap 3422228, overlap 3422219 TGTCCACCAAACGGA TGCCG CGTT CGGCA TTTTCGTTGGAAACG Acid345_2880 3422335 - 3423072 + | LmbE-like protein TERM 2615 3423163 - 3423142 - T 77 -11.5 -3.58533 | overlap 3423143 TCAGAATTCGTGAAA GGGCACGGC TTCA GCCGTGCCG AAAAGGCCGCCCAAA TERM 2616 3423162 - 3423143 - T 83 -15 -2.74799 | overlap 3423142 CAGAATTCGTGAAAG GGCACGGC TTCA GCCGTGCC GAAAAGGCCGCCCAA TERM 2617 3423199 - 3423184 - T 73 -6 -4.40561 | overlap 3423181 3423185 GCCGCCCAAAAAGAA CGGGGC TTTA GCCCCT GCGGCCCTCGTCCTC TERM 2618 3423527 - 3423544 + T 95 -10.5 -4.66537 | opp_overlap 3423525 TAACTCGAATGCAGA CCCGCCG CGAG TGGCGGG TTTTCTCTTGCCGAG Acid345_2881 3424869 - 3423823 - | hypothetical protein TERM 2619 3424118 - 3424136 + g 71 -11.6 -3.25192 | overlap 3424115 GTCGCCTCATCCCAT CCGCGCCC GCC GAGCGCGG TGTTGTGGGGTTGGA Acid345_2882 3426102 - 3424909 - | putative signal transduction protein TERM 2620 3426361 - 3426343 - g 82 -10.2 -4.17023 | opp_overlap 3426355 CCAAGCAGCTCAAAA CCGGCGAC AGC GTCGCCTG CAGCGGTGTCTGCCT Acid345_2883 3426234 - 3426881 + | riboflavin synthase subunit alpha TERM 2621 3427071 - 3427052 - g 72 -5.6 -4.51174 | TCAGGACAAGGAAAA GCGCAAGG CCGC CCTCGAGC GTGAACTGCTAAAAG Acid345_2884 3426927 - 3427178 + | transcriptional regulator Acid345_2885 3427175 - 3427492 + | plasmid stabilization system protein Acid345_2886 3428328 - 3427501 - | ABC transporter, ATPase subunit Acid345_2887 3428972 - 3428325 - | molybdenum cofactor guanylyltransferase TERM 2622 3429139 - 3429164 + G 76 -13.3 -2.72344 | CATGGCCATCATCAC TCTCGCCGGAG TCGG CTACGGCGAGA TCATTGACACTACCC TERM 2623 3429817 - 3429801 - g 72 -6.5 -4.36127 | GCGAACAATCGAAAA CTCTGCG CAT CGAAGAG GTCGTCATCAAGGGC Acid345_2888 3429005 - 3430078 + | TrkA-N Acid345_2889 3430716 - 3430318 - | hypothetical protein TERM 2624 3430780 - 3430816 + H 100 -18.8 -4.07568 | opp_overlap 3430770, overlap 3430773 3430776 3430781 CATTACGCCGTGGGT GCCCCGTCCTTATCCG CACAA CGGATAGGGACGGGGA TTTTCACGCACCGCA TERM 2625 3430781 - 3430815 + H 100 -22.3 -3.04398 | opp_overlap 3430770, overlap 3430773 3430776 3430780 ATTACGCCGTGGGTG CCCCGTCCTTATCCG CACAA CGGATAGGGACGGGG ATTTTCACGCACCGC TERM 2626 3431007 - 3430992 - g 76 -4.7 -4.78848 | TCGCTAAAGAGAAAA TCCTG GCTGTT CAGGA GTACGCTCAGTTGGC Acid345_2890 3430952 - 3431728 + | hypothetical protein TERM 2627 3431904 - 3431873 - g 95 -14.4 -3.65046 | opp_overlap 3431895, overlap 3431885 CTTCGACGTCAAGAA CGGCGAGACCAAGG TCCT CCTCGGCGTCGCCG GCACCGGCAAAACCC TERM 2628 3431947 - 3431967 + G 76 -12.5 -3.04144 | TCGCCCTCGGCCTCC TGCGCCCTG ACT CCGGGCGCA TCTTCACGCTCGGCG Acid345_2891 3431733 - 3432581 + | ABC transporter, ATPase subunit TERM 2629 3432596 - 3432611 + F 70 -3.2 -4.74103 | overlap 3432597 ATTCGTTGTGAGGTT TTCGCG TAGT CGTGAG TTTTTCCCTTCGCGG Acid345_2892 3432847 - 3434535 + | hypothetical protein Acid345_2893 3435352 - 3436623 + | DEAD/DEAH box helicase-like TERM 2630 3436665 - 3436645 - T 100 -14 -3.87584 | opp_overlap 3436645 AAGCAGAACTAAGAA GAGCGCGG CATGT CCGCGCTC TTTTGCTTTTCGCTT TERM 2631 3436645 - 3436665 + T 100 -14 -4.69549 | opp_overlap 3436645 AAGCAGAACTAAGAA GAGCGCGG CATGT CCGCGCTC TTTTGCTTTTCGCTT Acid345_2894 3437205 - 3436726 - | response regulator receiver protein Acid345_2895 3439313 - 3437196 - | multi-sensor signal transduction histidine kinase TERM 2632 3439552 - 3439572 + r 95 -14.1 -3.21593 | overlap 3439550 TCAGTCGGCGAGCCT GATGCGTCT GAA AGACGCATC TCTTCTGCCCCGATC TERM 2633 3439813 - 3439801 - R 76 -3.3 -5.0916 | GTTTGAAGAGAAAAA TCCGG GCG CTGGA ACGATCACCGGAAAG Acid345_2896 3442543 - 3440003 - | ABC efflux pump, inner membrane subunit TERM 2634 3442299 - 3442280 - G 88 -11.4 -4.13767 | overlap 3442265 CGCGGTAGCGGAAAA TCCCGGCG AGCG CGCCAGGA TGCGCGCCCCAAAGC Acid345_2897 3442881 - 3442540 - | PadR family transcriptional regulator Acid345_2898 3443600 - 3443133 - | DoxX TERM 2635 3443364 - 3443353 - G 70 -2.2 -4.86731 | GGGGCCGAAAGAAAA CCTA CAGC CAGG AACGATCCGGCAACG Acid345_2899 3443770 - 3444216 + | glyoxalase/bleomycin resistance protein/dioxygenase TERM 2636 3444237 - 3444227 - f 70 -6.8 -4.09108 | GGTAATGCAGAGAAA GAGG TTT CCTC ATGGACGAATCAAAA TERM 2637 3444272 - 3444258 - g 77 -7.8 -4.27062 | opp_overlap 3444266 3444268 CGAATCAAAAGCAAA CGGCAT GTC ACGCCG GCGTCTCCTGGAGTT TERM 2638 3444543 - 3444581 + G 73 -3.2 -4.86731 | overlap 3444530 3444540 3444546 TGCGGCTGGATACCA CGTCGTGGTTCCGT-ACC TGCGC GGTTATGGGACGACG-CG TTTTCTTTCCAGCGA TERM 2639 3445104 - 3445072 - g 79 -6.8 -4.60487 | overlap 3445056 GACGACCTGGAAAAA CGGCTCGCCGAAGG TCCTC CCATCACCGTGCCG ACCATCACCATGGAG Acid345_2900 3444238 - 3445281 + | Alpha/beta hydrolase TERM 2640 3445340 - 3445296 - T 100 -14.5 -4.54205 | gap 2, opp_overlap 3445337, overlap 3445298 ATGACAGCAAACAAA GT-CCCCA-CCCTATCGCGCA AGTAA CGCGCGATAAGGATGGGGCAC CCAGAGCTTTGAGAA TERM 2641 3445337 - 3445298 - T 90 -17.3 -2.5814 | gap 1, overlap 3445296 GACAGCAAACAAAGT CCCCA-CCCTATCGCGCA AGTAA CGCGCGATAAGGATGGGG CACCCAGAGCTTTGA Acid345_2901 3445954 - 3445403 - | hypothetical protein Acid345_2902 3446536 - 3446075 - | LuxR family transcriptional regulator Acid345_2903 3447208 - 3446570 - | hypothetical protein Acid345_2904 3447333 - 3448973 + | glycosyl transferase family protein Acid345_2905 3450771 - 3448990 - | metallophosphoesterase Acid345_2906 3451692 - 3451108 - | hypothetical protein Acid345_2907 3453575 - 3451770 - | YVTN beta-propeller repeat-containing protein Acid345_2908 3454372 - 3453572 - | putative secreted glycosyl hydrolase TERM 2642 3454855 - 3454839 - g 95 -6.5 -5.40072 | TCTGCGCGAAAAAAA CGCAGCT CTC AGCTCCG CCCCGATCGACATCA TERM 2643 3455125 - 3455103 - g 75 -5.4 -4.56597 | opp_overlap 3455104, overlap 3455104 GCCGGGTCCGAAAAA GGCGGACGCA ATC TGCGCCTGCT TCAATAGTGGCGTCT nagB 3454495 - 3455262 + | glucosamine-6-phosphate deaminase TERM 2644 3455517 - 3455505 - g 72 -9.1 -3.85698 | CGCTTTGTGGATAAA GTCGG CAC CCGAC GCGGCCTCTCCATCA Acid345_2910 3455259 - 3456584 + | major facilitator transporter TERM 2645 3456622 - 3456588 - T 100 -15 -4.96848 | overlap 3456589 3456608 CGGCCGATATAAAAA GCGGGGCACCTCAAGA ACA TCTCGAGGCACCCCGA ATTACACCGACTCCA TERM 2646 3456621 - 3456589 - T 100 -18.5 -3.57627 | overlap 3456588 3456608 GGCCGATATAAAAAG CGGGGCACCTCAAGA ACA TCTCGAGGCACCCCG AATTACACCGACTCC Acid345_2911 3457937 - 3456624 - | hypothetical protein Acid345_2912 3458404 - 3458012 - | hypothetical protein TERM 2647 3458378 - 3458409 + g 88 -11 -4.18018 | gap 1, overlap 3458378 TGTTTCCATTGGATG C-CCCATGTCTCG CGATTTT CGAGACATGGGAG TTTTCGCTCCGCGGC TERM 2648 3459801 - 3459755 - R 76 -5.1 -4.71426 | gap 2, opp_overlap 3459756 3459757 3459758, overlap 3459756 3459758 CTTCCAGGAAGAAAA TCAGGGGTCTGGA-TCGG-GCAA TTT TCGCGCCGCGTCCAGACCCCCTC TTTGCAAATCCCCAG TERM 2649 3459757 - 3459799 + r 70 -9.9 -3.36515 | gap 2, opp_overlap 3459756 3459755 3459758, overlap 3459756 3459758 TCCAGGAAGAAAATC AGGGGTCTGGAT-CGG-GCAA TTT TCGCGCCGCGTCCAGACCCCC TCTTTGCAAATCCCC TERM 2650 3459798 - 3459758 - R 87 -13.4 -3.27725 | gap 2, opp_overlap 3459757 3459756 3459758, overlap 3459756 3459755 CCAGGAAGAAAATCA GGGGTCTGGA-TCGG-GCAA TTT TCGCGCCGCGTCCAGACCCC CTCTTTGCAAATCCC TERM 2651 3459758 - 3459798 + r 78 -13.4 -2.61695 | gap 2, opp_overlap 3459758 3459756 3459755, overlap 3459757 3459756 CCAGGAAGAAAATCA GGGGTCTGGAT-CGG-GCAA TTT TCGCGCCGCGTCCAGACCCC CTCTTTGCAAATCCC Acid345_2913 3461652 - 3459895 - | hypothetical protein TERM 2652 3461679 - 3461699 + H 73 -9 -3.80893 | TTCGAGCGATAGGTG GATGCCTC CCCAC GAGGCGTC TTTCCGTTATACGCT Acid345_2914 3461680 - 3463314 + | hypothetical protein Acid345_2915 3463898 - 3463311 - | 3-isopropylmalate dehydratase, small subunit Acid345_2916 3465312 - 3463900 - | isopropylmalate isomerase large subunit Acid345_2917 3466453 - 3465359 - | 3-isopropylmalate dehydrogenase Acid345_2918 3467691 - 3466468 - | 2-isopropylmalate synthase TERM 2653 3467578 - 3467616 + g 71 -13 -2.52516 | overlap 3467577 3467589 AACGTCCACGCCGAG CCGATCGAGCTGCCGCGC CAT GCGCAGCTTCTCCATCGG ATTCATGCTGCAGCC TERM 2654 3467726 - 3467714 - H 80 -10.5 -3.85698 | CCTGGGTCCCAGAAA CGGGC ACG GCCCG CGGACGGGTCGTAGG Acid345_2919 3467850 - 3468767 + | LysR family transcriptional regulator Acid345_2920 3468828 - 3469208 + | response regulator receiver protein TERM 2655 3469459 - 3469478 + G 72 -5.6 -4.43272 | overlap 3469460 GGCGGTGGTTGGGAT TGCCGGAG AGGT CTGCGGCG TTTTGAATTTTGCGT Acid345_2921 3469223 - 3469777 + | hypothetical protein Acid345_2922 3469847 - 3470581 + | flagellar basal-body rod protein FlgG Acid345_2923 3470592 - 3471383 + | flagellar basal-body rod FlgG TERM 2656 3471630 - 3471614 - g 78 -7.9 -4.49906 | opp_overlap 3471614, overlap 3471615 GAATATCGAAAGAAA TTCCGGC GGT GCCGGAG TGTTGCGGATCGAGT TERM 2657 3471629 - 3471615 - g 71 -11.4 -3.28859 | opp_overlap 3471614, overlap 3471614 AATATCGAAAGAAAT TCCGGC GGT GCCGGA GTGTTGCGGATCGAG Acid345_2924 3471396 - 3471938 + | hypothetical protein TERM 2658 3472079 - 3472051 - g 79 -6.8 -4.61231 | gap 1 GCACACGCCGAAAAA CGC-GAAAAGGAT AAGA ATCCCCTTCAGCG CTACATGGCAACCTT Acid345_2925 3471952 - 3472674 + | flagellar L-ring protein flgI 3472727 - 3473782 + | flagellar basal body P-ring protein Acid345_2927 3473782 - 3474078 + | hypothetical protein Acid345_2928 3474152 - 3474490 + | anti-sigma-28 factor, FlgM Acid345_2929 3474487 - 3474807 + | hypothetical protein Acid345_2930 3474814 - 3476190 + | flagellar hook-associated protein TERM 2659 3477023 - 3477004 - g 71 -10.6 -3.57792 | TGACCCAGGCGGAAA CCGCGCGG AACG CCGCGCTG TCAGCGGCCGCACGG Acid345_2931 3476187 - 3477074 + | flagellin-like Acid345_2932 3477853 - 3477062 - | OmpA/MotB family outer membrane protein Acid345_2933 3478617 - 3477850 - | MotA/TolQ/ExbB proton channel Acid345_2934 3478857 - 3478633 - | hypothetical protein Acid345_2935 3479040 - 3480188 + | flagellin-like TERM 2660 3480242 - 3480189 - f 72 -11.2 -3.14463 | gap 2 AAGCTGTTGCAGTAA GAGTGATGTGGTTCTCCGGAGCAGGA TCTC TCCTGCTCCGGAGAAAT-C-TGACTC TCAAGAAACATTAGA TERM 2661 3481397 - 3481379 - g 72 -5.2 -4.42386 | CTTCCAGGGAGAAAA CAGCTTCG GAA CAACGCTG AGCAGTGCGGCGCAG TERM 2662 3481526 - 3481539 + G 74 -8.1 -4.15565 | opp_overlap 3481511 TCGGCTCGCTTCGCA GCAGC AGAC GCTGC TTTTGCAGTACTCGC Acid345_2936 3480306 - 3481646 + | flagellar hook-associated 2-like Acid345_2937 3481648 - 3482112 + | flagellar protein FliS Acid345_2938 3482114 - 3482452 + | hypothetical protein Acid345_2939 3483296 - 3482436 - | response regulator receiver protein TERM 2663 3485183 - 3485159 - g 73 -12.2 -3.06133 | gap 1 CAAGCCGCTACCGAA GGATGCGGTGC TCCC GC-CCGCATCC GCGGCTCCGGCAAAG Acid345_2940 3483561 - 3485219 + | peptidase M28 TERM 2664 3485274 - 3485216 - T 100 -13.3 -5.27335 | gap 1, opp_overlap 3485219 3485220 3485229 3485233, overlap 3485217 3485219 3485220 3485229 3485233 CCCTGCAAAGAAAAA GTAGCGT-GAGCAACAAAGACGGCGGAC CGCG GTCCACCGTCTTTGTTGCTCGAAGATTA TGCCCCGCCGCGGAC TERM 2665 3485273 - 3485217 - T 100 -16.8 -3.75678 | gap 1, opp_overlap 3485219 3485220 3485229 3485233, overlap 3485216 3485219 3485220 3485229 3485233 CCTGCAAAGAAAAAG TAGCGT-GAGCAACAAAGACGGCGGAC CGCG GTCCACCGTCTTTGTTGCTCGAAGATT ATGCCCCGCCGCGGA TERM 2666 3485219 - 3485271 + T 100 -17.2 -3.28712 | gap 1, opp_overlap 3485217 3485216 3485219 3485220 3485229 3485233, overlap 3485220 3485229 3485233 TGCAAAGAAAAAGTA GCGT-GAGCAACAAAGACGGCGGAC CGCG GTCCACCGTCTTTGTTGCTCGAAGA TTATGCCCCGCCGCG TERM 2667 3485271 - 3485219 - T 100 -19.4 -3.45131 | gap 1, opp_overlap 3485219 3485220 3485229 3485233, overlap 3485217 3485216 3485220 3485229 3485233 TGCAAAGAAAAAGTA GCGT-GAGCAACAAAGACGGCGGAC CGCG GTCCACCGTCTTTGTTGCTCGAAGA TTATGCCCCGCCGCG TERM 2668 3485270 - 3485220 - T 100 -22.9 -2.65994 | gap 1, opp_overlap 3485219 3485220 3485229 3485233, overlap 3485219 3485217 3485216 3485229 3485233 GCAAAGAAAAAGTAG CGT-GAGCAACAAAGACGGCGGAC CGCG GTCCACCGTCTTTGTTGCTCGAAG ATTATGCCCCGCCGC TERM 2669 3485220 - 3485270 + T 100 -20.7 -2.57132 | gap 1, opp_overlap 3485220 3485219 3485217 3485216 3485229 3485233, overlap 3485219 3485229 3485233 GCAAAGAAAAAGTAG CGT-GAGCAACAAAGACGGCGGAC CGCG GTCCACCGTCTTTGTTGCTCGAAG ATTATGCCCCGCCGC TERM 2670 3485229 - 3485260 + T 100 -17.4 -3.15758 | opp_overlap 3485220 3485219 3485217 3485216 3485229 3485233, overlap 3485220 3485219 3485233 AAGTAGCGTGAGCAA CAAAGACGGCGGAC CGCG GTCCACCGTCTTTG TTGCTCGAAGATTAT TERM 2671 3485260 - 3485229 - T 100 -19.6 -3.16039 | opp_overlap 3485229 3485220 3485219 3485233, overlap 3485220 3485219 3485217 3485216 3485233 AAGTAGCGTGAGCAA CAAAGACGGCGGAC CGCG GTCCACCGTCTTTG TTGCTCGAAGATTAT TERM 2672 3485256 - 3485233 - T 100 -14.6 -4.2461 | opp_overlap 3485229 3485220 3485219 3485233, overlap 3485229 3485220 3485219 3485217 3485216 AGCGTGAGCAACAAA GACGGCGGAC CGCG GTCCACCGTC TTTGTTGCTCGAAGA TERM 2673 3485233 - 3485256 + T 93 -12.4 -4.24342 | opp_overlap 3485233 3485229 3485220 3485219 3485217 3485216, overlap 3485229 3485220 3485219 AGCGTGAGCAACAAA GACGGCGGAC CGCG GTCCACCGTC TTTGTTGCTCGAAGA Acid345_2941 3486162 - 3485272 - | hypothetical protein Acid345_2942 3487469 - 3486255 - | glutamate dehydrogenase/leucine dehydrogenase-like Acid345_2943 3488762 - 3487578 - | polysulphide reductase, NrfD Acid345_2944 3489532 - 3488765 - | 4Fe-4S ferredoxin, iron-sulfur binding Acid345_2945 3490231 - 3489569 - | glycine cleavage H-protein TERM 2674 3490461 - 3490487 + r 83 -13.1 -3.28497 | gap 1, overlap 3490457 GTCGCTGCATTTTGC GCGTG-TCGCAC GGGC GTGCGATCACGC TTCGATTTGCGCTAC Acid345_2946 3491636 - 3490482 - | response regulator receiver modulated serine phosphatase Acid345_2947 3491795 - 3492142 + | hypothetical protein TERM 2675 3492419 - 3492399 - T 100 -14.7 -4.88067 | opp_overlap 3492399 ACGCACGCAGAAAAA GGACGGCCA CCT CGGCCGTCC TTCTCCGTTACTCAC TERM 2676 3492399 - 3492419 + T 95 -14 -3.43676 | opp_overlap 3492399 ACGCACGCAGAAAAA GGACGGCC ACCTC GGCCGTCC TTCTCCGTTACTCAC TERM 2677 3492453 - 3492440 - T 74 -3.1 -4.87665 | CGTTACTCACAAAAA CCTAA AGTG TCAGG TGAGGATTCGCGAGT Acid345_2948 3493484 - 3492441 - | radical SAM family Fe-S protein TERM 2678 3492474 - 3492492 + g 71 -7.3 -4.17516 | overlap 3492475 3492478 ATTCGCGAGTTCTTC CGTGCGC AAACG GCGCTCG TTTATGTGCTTTACA TERM 2679 3493588 - 3493577 - R 71 -5.8 -4.32402 | opp_overlap 3493578 3493579, overlap 3493578 3493579 TCGGAAGCAAAAGAA GTGG GGCG CCAC GCTTGAGTGCGTTTG Acid345_2949 3495617 - 3493710 - | hypothetical protein TERM 2680 3495685 - 3495650 - R 100 -15.6 -3.32769 | opp_overlap 3495657, overlap 3495654 TTGTGAAACGAGCAA GAAAGAACCCGCCA AGTATAAA TGGCGGGTTCTCTC GGAATAGCGCGGCCT TERM 2681 3495681 - 3495654 - R 100 -12.8 -4.30833 | opp_overlap 3495657, overlap 3495650 GAAACGAGCAAGAAA GAACCCGCCA AGTATAAA TGGCGGGTTC TCTCGGAATAGCGCG Acid345_2950 3497540 - 3495699 - | Cl- channel, voltage gated TERM 2682 3497457 - 3497427 - G 90 -11.8 -4.2123 | CAGCCACGCAACAAA CCCGGCGGCCGT ACCGATG ATGGCCGCCAGG AATGAAACGAGATGA Acid345_2951 3498104 - 3497616 - | MarR family transcriptional regulator TERM 2683 3497822 - 3497834 + g 74 -6.9 -4.2803 | opp_overlap 3497801 GCACCTCACGCTTAT CGCGG TCG CTGCG TTTTCGGTTGACGTA Acid345_2952 3498256 - 3499551 + | adenylosuccinate lyase TERM 2684 3499594 - 3499564 - T 86 -10.5 -4.08692 | gap 1, opp_overlap 3499562 3499565 3499567, overlap 3499567 TAATTTTCTGCAAAA GTATGAGCCACAGC CTAG GCTGTGGCTCGT-C TCTTAGTCAATCACT TERM 2685 3499565 - 3499594 + T 81 -12.9 -3.15699 | opp_overlap 3499564 3499567, overlap 3499562 3499567 AATTTTCTGCAAAAG TATGAGCCACAGC CTAG GCTGTGGCTCGTC TCTTAGTCAATCACT TERM 2686 3499567 - 3499592 + T 93 -15.5 -3.13867 | opp_overlap 3499564 3499567, overlap 3499565 3499562 TTTTCTGCAAAAGTA TGAGCCACAGC CTAG GCTGTGGCTCG TCTCTTAGTCAATCA TERM 2687 3499592 - 3499567 - T 84 -13.3 -3.08032 | opp_overlap 3499567 3499565 3499562, overlap 3499564 TTTTCTGCAAAAGTA TGAGCCACAGC CTAG GCTGTGGCTCG TCTCTTAGTCAATCA Acid345_2953 3500219 - 3499776 - | DoxX TERM 2688 3500253 - 3500266 + r 73 -5.3 -4.63218 | CTCGTTGTACAGATG TTCGT TATC ACGAA TTTTGTTGCAAAAAA Acid345_2954 3500751 - 3500284 - | MarR family transcriptional regulator Acid345_2955 3501323 - 3500793 - | hypothetical protein Acid345_2956 3501642 - 3501325 - | PadR family transcriptional regulator Acid345_2957 3502167 - 3501715 - | protein tyrosine phosphatase Acid345_2958 3503234 - 3502146 - | arsenical-resistance protein TERM 2689 3502339 - 3502316 - G 93 -11 -4.62336 | overlap 3502318 AGTTGATCCCAAAAA TCGCCACCGC TACC GCGATGGCAA GTTCGAAGTTATTGC TERM 2690 3503133 - 3503094 - G 71 -12.9 -2.53876 | TGCGATCGGAATCGA GGTGGTGCCCACGCTCA TGCGGT TGAGCATCGGCACCACT CCCGGAAACAGCCAT Acid345_2959 3504058 - 3503237 - | methyltransferase type 11 Acid345_2960 3504597 - 3504055 - | MarR family transcriptional regulator TERM 2691 3504631 - 3504607 - R 100 -14.4 -5.16572 | ATTCAACGCAAAAAA TAACCCGCAC TATGG GTGCGGGTTA AGCGGAGAAACTAGG Acid345_2961 3505848 - 3504691 - | glutamine-fructose-6-phosphate transaminase (isomerizing) Acid345_2962 3507531 - 3505921 - | citrate lyase, alpha subunit Acid345_2963 3508748 - 3507528 - | citrate lyase acyl carrier protein TERM 2692 3508796 - 3508768 - R 87 -8.1 -4.58395 | gap 1, opp_overlap 3508768 TTCACTCCTCAAAAA GGCCCCGC-TGC TGGTTG GCATGCCGGGCC TTTGGTCACCGCTGA TERM 2693 3508768 - 3508796 + r 70 -8.8 -3.73224 | gap 1, opp_overlap 3508768 TTCACTCCTCAAAAA GGCCCCGC-TGCT GGTT GGCATGCCGGGCC TTTGGTCACCGCTGA Acid345_2964 3510024 - 3508813 - | 3-isopropylmalate dehydrogenase Acid345_2965 3512034 - 3510067 - | homoaconitase TERM 2694 3512053 - 3512085 + r 93 -16.3 -2.88544 | overlap 3512055 3512056 GACCTCCTACGGGGT CCCCGGCGAGCGC CGATTTT GCGCTCGTTGGGG TGTCTAGCGGTCCGC Acid345_2966 3513498 - 3512089 - | MmgE/PrpD Acid345_2967 3514097 - 3513507 - | putative metal dependent phosphohydrolase Acid345_2968 3514701 - 3514387 - | hypothetical protein Acid345_2969 3517262 - 3514698 - | AMP-dependent synthetase and ligase Acid345_2970 3517680 - 3517348 - | ArsR family transcriptional regulator TERM 2695 3518254 - 3518221 - R 70 -6.7 -4.10007 | gap 1, opp_overlap 3518221, overlap 3518223 3518224 ATAAGCCGTCCAAAA CAGTTGAGCGCACC CTCTGCC GGTGCGCCC-ACGG TTTGCTGATTTTCGA Acid345_2971 3518943 - 3518275 - | phosphate uptake regulator, PhoU Acid345_2972 3519711 - 3518950 - | ABC phosphate transporter, ATPase subunit TERM 2696 3519764 - 3519750 - R 81 -12.8 -3.06183 | GTCATCCTGAGCGAA GCGGCC AGA GGCCGC GAAGTCGAAGGATCC Acid345_2973 3520681 - 3519800 - | ABC phosphate transporter, inner membrane subunit Acid345_2974 3521738 - 3520674 - | phosphate ABC transporter inner membrane protein TERM 2697 3521589 - 3521576 - G 75 -5.3 -4.56597 | TTGCGCCGCGAAAAA TGTTG TCGG CAACA CGGACGCCTGCGCTC TERM 2698 3521803 - 3521819 + r 81 -8 -4.25104 | opp_overlap 3521817, overlap 3521817 ATAGTGTGTTGCTAT GGCTTG AATCA CAAGCC TTTTCCTCAAAAGCC TERM 2699 3521983 - 3521952 - R 91 -7.3 -5.0925 | opp_overlap 3521980, overlap 3521954 CTCCAAAAGCAAAAA CACCCAGCGCC CCGGAGGGTC AGCGCTGGGTA TGCATCCGCGGGTGC TERM 2700 3521981 - 3521954 - R 74 -7.7 -4.16392 | opp_overlap 3521980, overlap 3521952 CCAAAAGCAAAAACA CCCAGCGCC CCGGAGGGTC AGCGCTGGG TATGCATCCGCGGGT Acid345_2975 3523012 - 3522008 - | ABC transporter, periplasmic phosphate binding protein TERM 2701 3523005 - 3522991 - G 70 -4.2 -4.61868 | CAGTCAGACAGAAAA GTACTC GCA GCGTAC GTTGCAAAGTCATTC TERM 2702 3523163 - 3523149 - R 72 -11.4 -3.06183 | overlap 3523152 GTCATCGTGAGCGAA GCACGC GCA GCGTGC GAAGTCGAAGGACCC Acid345_2976 3524190 - 3523471 - | phosphate uptake regulator, PhoU TERM 2703 3524728 - 3524716 - g 77 -7.7 -4.37886 | GGAGGCTGCAGAAAA GAACC TCG GGTTC GTAATCGACGTGAAG Acid345_2977 3524429 - 3524914 + | hypothetical protein TERM 2704 3524962 - 3524928 - T 100 -15.1 -4.07885 | opp_overlap 3524928 3524933, overlap 3524933 GATTTTTCCGCAAAA CAAAAGAGCCGCAGC TTCGC GCCGCGGCTCTTTTC TTGTTGGTCTGAATC TERM 2705 3524928 - 3524962 + T 90 -12.9 -3.78034 | opp_overlap 3524928 3524933, overlap 3524933 GATTTTTCCGCAAAA CAAAAGAGCCGCAGC TTCGC GCCGCGGCTCTTTTC TTGTTGGTCTGAATC TERM 2706 3524957 - 3524933 - T 100 -15 -5.07652 | opp_overlap 3524928 3524933, overlap 3524928 TTCCGCAAAACAAAA GAGCCGCAGC TTCGC GCCGCGGCTC TTTTCTTGTTGGTCT TERM 2707 3524933 - 3524957 + T 100 -12.8 -4.93661 | opp_overlap 3524933 3524928, overlap 3524928 TTCCGCAAAACAAAA GAGCCGCAGC TTCGC GCCGCGGCTC TTTTCTTGTTGGTCT Acid345_2978 3525569 - 3524979 - | hypothetical protein TERM 2708 3525779 - 3525793 + r 70 -7 -4.10429 | overlap 3525775 3525791 TTGCAAAAGGGCGGT CCGGAC AGG GGCCGG TTTTGCACCGTGATT TERM 2709 3526143 - 3526108 - R 100 -16.2 -4.39386 | gap 1, opp_overlap 3526136, overlap 3526109 3526135 CTGAAACGATGAAAA TCCCCG-CCCTATCGCG CTG CGCGATAAGGACGGGGC ACCCTGACTTACTTC TERM 2710 3526142 - 3526109 - R 100 -19.7 -3.22909 | gap 1, opp_overlap 3526136, overlap 3526108 3526135 TGAAACGATGAAAAT CCCCG-CCCTATCGCG CTG CGCGATAAGGACGGGG CACCCTGACTTACTT Acid345_2979 3528119 - 3526152 - | beta-lactamase Acid345_2980 3528379 - 3531759 + | integrin-like protein Acid345_2981 3532598 - 3533170 + | hypothetical protein Acid345_2982 3533261 - 3533617 + | GntR family transcriptional regulator TERM 2711 3534104 - 3534118 + G 71 -7.2 -4.11692 | TTGGGACTCGACATC CTGTTT CGA AAACAG TTTTACGAATCGCTG Acid345_2983 3533621 - 3534496 + | ABC transporter, ATPase subunit TERM 2712 3535380 - 3535416 + G 70 -12.1 -2.71731 | overlap 3535382 GGCTGGGTTCCTGCT CGCCGCTGCGCGCCTGC GTC GCTGGCGTGGAGCCGTG TAATTGCGGGCTCAC Acid345_2984 3534493 - 3535419 + | ABC transporter, inner membrane subunit Acid345_2985 3536424 - 3535459 - | putative anti-sigma regulatory factor, serine/threonine protein kinase TERM 2713 3535584 - 3535563 - G 83 -9.3 -4.30576 | overlap 3535564 3535565 TGTTGATGAGGAAAA CGCCGCGGC CGCT GCCGCGGAA CAAGCCTTCGCCCTC TERM 2714 3535582 - 3535565 - G 78 -14.1 -2.50493 | overlap 3535564 3535563 TTGATGAGGAAAACG CCGCGGC CGCT GCCGCGG AACAAGCCTTCGCCC Acid345_2986 3536501 - 3537307 + | MIP family channel protein Acid345_2987 3537316 - 3538812 + | glycerol kinase Acid345_2988 3539398 - 3538907 - | fimbrial protein pilin TERM 2715 3539684 - 3539694 + r 78 -6.8 -4.59109 | opp_overlap 3539679 CTGATACAAACTCGC CTCG ATA CGAG TTTTTCAGCAGTCTG Acid345_2989 3541549 - 3539792 - | multi-sensor signal transduction histidine kinase TERM 2716 3541388 - 3541408 + g 78 -6.7 -4.56597 | opp_overlap 3541402, overlap 3541390 GCGTTCAGCCTGGAC GCGCAGCGC GAA GAGCTGCAC TTTTTCGCGCAGCGA Acid345_2990 3542238 - 3541546 - | two component transcriptional regulator TERM 2717 3541937 - 3541964 + g 82 -9 -4.42788 | GGCTTAGCGATGTAG TCGTCGGCACCG AGAT CGAGGCCGGCGA TTTTATCGGCTTCCG Acid345_2991 3545583 - 3542542 - | FAD linked oxidase-like TERM 2718 3544419 - 3544408 - G 71 -7.2 -4.15044 | opp_overlap 3544418 CTCGCCGGGAACAAA GGCG GTGG CGCC GAGACTGGATTCGCG TERM 2719 3545839 - 3545856 + r 70 -9.9 -3.32963 | opp_overlap 3545823 TCCTTCGACTGCGAA TCCGGAT TGGG ATCCGGA TTCTCCGCTCAGGAT Acid345_2992 3546572 - 3545901 - | hypothetical protein TERM 2720 3546708 - 3546675 - R 83 -9.6 -4.09864 | opp_overlap 3546681, overlap 3546681 AGGCATTGGGCAAAA CGGAAAGAGGAGCC GACTGG GGCTCCTCTTTTGG ACAAAATGTTGTGGG TERM 2721 3546702 - 3546681 - R 85 -11.6 -3.92659 | opp_overlap 3546681, overlap 3546675 TGGGCAAAACGGAAA GAGGAGCC GACTGG GGCTCCTC TTTTGGACAAAATGT TERM 2722 3546681 - 3546702 + r 88 -11.6 -4.08394 | opp_overlap 3546681 3546675 TGGGCAAAACGGAAA GAGGAGCC GACTGG GGCTCCTC TTTTGGACAAAATGT Acid345_2993 3547042 - 3546725 - | Caa(3)-type oxidase, subunit IV Acid345_2994 3547737 - 3547048 - | cytochrome c oxidase, subunit III Acid345_2995 3549364 - 3547730 - | cytochrome-c oxidase Acid345_2996 3550370 - 3549381 - | cytochrome c oxidase, subunit II TERM 2723 3550204 - 3550215 + g 74 -2.2 -4.88918 | CCCTCGATCTGTTCG GCGT GCGG ATGC TTTTCTTTGCGGTAC Acid345_2997 3551218 - 3550376 - | electron transport protein SCO1/SenC TERM 2724 3550791 - 3550805 + g 72 -9.2 -3.76048 | overlap 3550792 AAGTGCCAGCCATCT TCGGCC CCG GGCCGG TTGTATTCCTTCAGG TERM 2725 3551135 - 3551147 + g 76 -3.3 -5.0065 | AGGATCGACTTGCGA TGCGG GGC CCGAA TTTTGTTTCTCCATG Acid345_2998 3551823 - 3551287 - | hypothetical protein Acid345_2999 3553009 - 3551813 - | hypothetical protein Acid345_3000 3553662 - 3553006 - | hypothetical protein Acid345_3001 3554248 - 3553703 - | transmembrane prediction TERM 2726 3554150 - 3554164 + g 76 -3.4 -5.01732 | GTCCATTTGGCGATA GCCGGC GGC GTAGGC TTTTTTCGCGGCGTT Acid345_3002 3555654 - 3554248 - | polysulphide reductase, NrfD Acid345_3003 3558701 - 3555657 - | Fe-S-cluster-containing hydrogenase Acid345_3004 3559425 - 3558709 - | chaperone protein HtpG TERM 2727 3559676 - 3559653 - R 100 -13.2 -6.00814 | opp_overlap 3559651 AAGAAGCAAAAAAAA GCGCATCTCA TTTG CGAGATGCGC ACTGATCTTGCTTCG TERM 2728 3559695 - 3559721 + r 73 -8.8 -3.85092 | overlap 3559696 GATCTTGCTTCGAGT TCTGCGAATTGA TGG TTAATTCGCGGG TTTGGTGTCGCTCAT Acid345_3005 3563000 - 3559710 - | TPR repeat-containing protein TERM 2729 3561708 - 3561731 + g 70 -2.2 -4.86385 | CACGACGTGCGGCTG GCCATCCACG GGAA CGAGCAGGGC TTTCTTTTTGCGGAT TERM 2730 3563046 - 3563065 + r 100 -16.4 -3.56216 | opp_overlap 3563046 GCTTGCAATGATAAA CGCCGCGG CGGA CCGCGGCG TTATCTGGATTACTT TERM 2731 3563065 - 3563046 - R 100 -16.4 -4.05446 | opp_overlap 3563046 GCTTGCAATGATAAA CGCCGCGG CGGA CCGCGGCG TTATCTGGATTACTT Acid345_3006 3565823 - 3563085 - | CoA-binding protein TERM 2732 3565783 - 3565793 + g 78 -8.2 -4.45517 | CGAAGGACGTCATGT GCCG GAT CGGC TTTTGTACCTGCTTT TERM 2733 3566666 - 3566641 - g 74 -6 -4.55128 | overlap 3566636 3566635 AGCGGCAAAGGAAAA CGCGAGCGCG TTTTCT CGTGATCGCG GGACACAACCACAAC Acid345_3007 3565977 - 3566918 + | metallophosphoesterase TERM 2734 3567385 - 3567349 - g 75 -5.9 -4.57341 | gap 1, overlap 3567375 AACGTTTTCGAAAAA CGGCTCGGCCAGTT GGAACCGGGA AAC-GGCGGAGCCG CGATTGTGGATGCGG Acid345_3008 3566923 - 3567948 + | von Willebrand factor, type A TERM 2735 3568069 - 3568118 + G 71 -10.8 -3.55622 | gap 3, overlap 3568070 GCTGATGGCTTCAAC TCG-CGCCTGCGGCGGATCGA-GCC CTG GGCCTCGAT-CGTCGGAGGCGGCGC TTTAACCGCATTCGG TERM 2736 3568070 - 3568117 + G 80 -14.3 -2.73159 | gap 3, overlap 3568069 CTGATGGCTTCAACT CG-CGCCTGCGGCGGATCGA-GCC CTG GGCCTCGAT-CGTCGGAGGCGGCG CTTTAACCGCATTCG Acid345_3009 3568027 - 3568797 + | cyclase/dehydrase Acid345_3010 3568817 - 3570013 + | alcohol dehydrogenase GroES-like protein TERM 2737 3570041 - 3570028 - f 70 -9.5 -3.42699 | opp_overlap 3570030, overlap 3570029 ACTGACCCAGCAGAA CGCGC CCCG GCGCG GCCATGAATCGTGGT TERM 2738 3570070 - 3570029 - f 72 -12.1 -2.65298 | gap 1, opp_overlap 3570030, overlap 3570028 CTGACCCAGCAGAAC GCGCCCCGGC-GCGGCCATG AAT CGTGGTCGCAGTCGGGGCGT TTCCTTTTACAAACC TERM 2739 3570030 - 3570069 + F 100 -22.2 -4.19735 | gap 1, opp_overlap 3570028 3570029 TGACCCAGCAGAACG CGCCCCGGC-GCGGCCATG AAT CGTGGTCGCAGTCGGGGCG TTTCCTTTTACAAAC Acid345_3011 3570182 - 3571234 + | phosphoribosylformylglycinamidine cyclo-ligase TERM 2740 3571286 - 3571261 - f 86 -7.5 -4.68384 | opp_overlap 3571264, overlap 3571263 3571264 3571278 AGGCACGCAAGAAAA TAGCCCACCTC GTAA GAGGTGGGTTT CGTGTGTGTGGCCTA TERM 2741 3571284 - 3571263 - f 80 -10.1 -3.95554 | opp_overlap 3571264, overlap 3571261 3571264 3571278 GCACGCAAGAAAATA GCCCACCTC GTAA GAGGTGGGT TTCGTGTGTGTGGCC TERM 2742 3571264 - 3571283 + F 93 -13.6 -3.91196 | opp_overlap 3571264 3571263 3571261 3571278 CACGCAAGAAAATAG CCCACCTC GTAA GAGGTGGG TTTCGTGTGTGTGGC TERM 2743 3571283 - 3571264 - f 81 -13.6 -2.96609 | opp_overlap 3571264, overlap 3571263 3571261 3571278 CACGCAAGAAAATAG CCCACCTC GTAA GAGGTGGG TTTCGTGTGTGTGGC Acid345_3012 3571875 - 3572558 + | phosphoribosylglycinamide formyltransferase TERM 2744 3572662 - 3572642 - g 86 -6.1 -4.87665 | overlap 3572645 TTCGACCCACAAAAA GAGTCCCAG GAC CTAGGATTC GGCACCGTACTTTCA Acid345_3013 3572615 - 3573550 + | K+ channel, inward rectifier Acid345_3014 3576953 - 3573555 - | multi-sensor hybrid histidine kinase TERM 2745 3574772 - 3574758 - G 74 -12.8 -2.87463 | opp_overlap 3574758 AATGCCCTCGACATA GCCGGC CTC GCCGGC TTCATCACTGACTAG TERM 2746 3574758 - 3574772 + g 79 -12.8 -3.18912 | opp_overlap 3574758 AATGCCCTCGACATA GCCGGC CTC GCCGGC TTCATCACTGACTAG TERM 2747 3575557 - 3575576 + g 81 -4.2 -5.16572 | gap 1, opp_overlap 3575557 GCGATGCGGTACAGA GCCGA-CTG AAG CTGCTCGGC TTTTTTGCGTTGGGT TERM 2748 3576783 - 3576768 - G 78 -6 -4.57837 | AGAGTTCTCGAAAAA CGTGCG AAGG CGCTCG TCGCCAAGGGAGGTC Acid345_3015 3578051 - 3576999 - | 4Fe-4S ferredoxin, iron-sulfur binding Acid345_3016 3579525 - 3578137 - | amino acid transporter TERM 2749 3579035 - 3578979 - G 83 -8 -4.67234 | overlap 3578983 ACCCAAGGTGAAAAA TGTAGCGC-ACCGTGGCGACGAAGAACG CCG CGATCACCACCGCCATGATCGCGC-ACA GGATCTGATTGATCC Acid345_3017 3580970 - 3579612 - | two component, sigma54 specific, Fis family transcriptional regulator Acid345_3018 3582559 - 3580991 - | PAS/PAC sensor hybrid histidine kinase Acid345_3019 3583441 - 3582695 - | type IV pilus assembly PilZ Acid345_3020 3583785 - 3584609 + | putative signal peptide protein TERM 2750 3584620 - 3584640 + F 100 -14 -5.27938 | opp_overlap 3584623 ATTAACTTCCCGACA GGAGCGGC CACGA GCCGCTCC TTTTTCTTTCCAGAT TERM 2751 3584835 - 3584853 + G 77 -13.8 -2.89742 | CGCGCTCCATCGGCC CGGCCGTC ATG GGCGGCCG TGTCTCAGCGTTGGC Acid345_3021 3584684 - 3587809 + | BNR repeat-containing glycosyl hydrolase TERM 2752 3587833 - 3587866 + T 73 -5.1 -4.57569 | opp_overlap 3587836, overlap 3587834 3587835 ATGCCCTGGAACACA AAAGCCCCATCGCCT TCCC AAGCGATGGGGCAAG TTTTTAGAACGATCA TERM 2753 3587835 - 3587864 + T 72 -12.1 -2.60211 | opp_overlap 3587836, overlap 3587834 3587833 GCCCTGGAACACAAA AGCCCCATCGCCT TCCC AAGCGATGGGGCA AGTTTTTAGAACGAT TERM 2754 3587863 - 3587836 - T 100 -17.8 -4.66537 | opp_overlap 3587835 3587834 3587833 CCCTGGAACACAAAA GCCCCATCGCCT TCCC AAGCGATGGGGC AAGTTTTTAGAACGA Acid345_3022 3588378 - 3587890 - | glyoxalase/bleomycin resistance protein/dioxygenase Acid345_3023 3588814 - 3588407 - | biotin/lipoyl attachment TERM 2755 3588861 - 3588838 - R 89 -13.8 -3.55622 | opp_overlap 3588833 3588832 3588850 CCCAATTTCTTGAAA CGCGGCGGAC TCGC GCCCACCGCG CTCAGTTCTTATGAG Acid345_3024 3589268 - 3588870 - | hypothetical protein TERM 2756 3589255 - 3589267 + g 78 -3.4 -5.09225 | TCCGCAATTTCGATT TGAG CGTTT CTCA TTTTTTCACTCCAAT Acid345_3025 3590890 - 3589292 - | carboxyl transferase TERM 2757 3590912 - 3590940 + r 100 -16.1 -3.28712 | CTCCACTCTTTATGC GGTGGCGCGAT GGTCAGG ATCGCGCCACC TTCTGGGCAGACCGC TERM 2758 3590941 - 3590975 + r 70 -5 -4.41348 | gap 1 CAGGATCGCGCCACC TTCTGGGCAGACCGC CGGTTC GCGGCCTGCG-AGAA TTTATTTCGCGGCGG Acid345_3026 3592539 - 3590977 - | oxaloacetate decarboxylase TERM 2759 3592227 - 3592186 - G 88 -15.9 -3.14132 | opp_overlap 3592186 3592186 GGCCTTGGCGACGAA CCGCTCGACTACCGAATCT TCAT AGTGTCGGTAGCCGAGCAG GTTCTGTCCGCGGAG TERM 2760 3592186 - 3592228 + g 74 -11.3 -3.48276 | gap 1, opp_overlap 3592186, overlap 3592186 GGCCTTGGCGACGAA CC-GCTCGACTACCGAATCT TCAT AGTGTCGGTAGCCGAGCAGG TTCTGTCCGCGGAGA Acid345_3027 3593520 - 3592684 - | glutamate--tRNA ligase Acid345_3028 3593800 - 3593543 - | hypothetical protein Acid345_3029 3595765 - 3593858 - | small GTP-binding protein Acid345_3030 3595973 - 3596929 + | hypothetical protein Acid345_3031 3598085 - 3596922 - | putative aminotransferase TERM 2761 3598162 - 3598131 - R 83 -9.5 -4.22041 | AAATCGCAACACAAA GGGCACAGATC GATAACTCAA GACCTGTGCCC CCAAATACCCTGTGT Acid345_3032 3599174 - 3598206 - | 6-phosphofructokinase TERM 2762 3599316 - 3599293 - R 100 -12.4 -5.44721 | overlap 3599294 ACGAGGGCAAAAAAA GGAGGCACGG TTTT CCGTGCCTCG GAGGGATTCGAGATC TERM 2763 3599315 - 3599294 - R 100 -15.9 -3.85748 | overlap 3599293 CGAGGGCAAAAAAAG GAGGCACGG TTTT CCGTGCCTC GGAGGGATTCGAGAT Acid345_3033 3600097 - 3599348 - | putative phophoslipid binding protein TERM 2764 3599852 - 3599867 + g 82 -6.1 -4.84359 | CACTTCTTTCACGCC GGCGA CCTTCT TCGCC TTTTTCTCAGCGTCA Acid345_3034 3601601 - 3600303 - | major facilitator transporter TERM 2765 3602207 - 3602184 - g 73 -11.8 -3.16742 | gap 1, overlap 3602174 GGCAAGGTTGAGGAA GCGAAC-ACGG ATA CCGTCGTTCGC CTCGCCAAAGAAGCC Acid345_3035 3601689 - 3603053 + | signal recognition particle subunit FFH/SRP54 (srp54) TERM 2766 3603073 - 3603100 + F 100 -14.2 -3.93658 | opp_overlap 3603055 3603077, overlap 3603077 TTACTGCAAATGCAG TAAAGGGCTGGC ACAC GCCGGCCCTTTG TTCTTTGCCAGTCTT TERM 2767 3603096 - 3603077 - f 80 -10.6 -3.82097 | opp_overlap 3603077 3603073, overlap 3603055 TGCAAATGCAGTAAA GGGCTGGC ACAC GCCGGCCC TTTGTTCTTTGCCAG TERM 2768 3603077 - 3603096 + F 100 -12.8 -4.56978 | opp_overlap 3603055 3603077, overlap 3603073 TGCAAATGCAGTAAA GGGCTGGC ACAC GCCGGCCC TTTGTTCTTTGCCAG Acid345_3036 3603262 - 3604656 + | amino acid transporter Acid345_3037 3605497 - 3604640 - | hypothetical protein Acid345_3038 3607133 - 3605562 - | radical SAM family Fe-S protein Acid345_3039 3607205 - 3608647 + | hypothetical protein Acid345_3040 3610089 - 3608644 - | D-glutamate deacylase TERM 2769 3610103 - 3610071 - G 93 -9.2 -4.82667 | CGACGACAGCAAAAA GGGCG-CATGCGACGA TCA CCG-CGCATAACGCCC TCACAATTCCAGACA Acid345_3041 3612691 - 3610157 - | ABC efflux pump, inner membrane subunit Acid345_3042 3614367 - 3613225 - | Alpha/beta hydrolase Acid345_3043 3614517 - 3615623 + | acyltransferase 3 TERM 2770 3615830 - 3615820 - g 71 -6.8 -4.18506 | TCAGTCGTAAAAGAA GGCA TCA TGCC GACCAGCTATCCGCG Acid345_3044 3615673 - 3616689 + | alcohol dehydrogenase GroES-like protein Acid345_3045 3618134 - 3616752 - | cytochrome P450 Acid345_3046 3618753 - 3618148 - | transcriptional regulator Acid345_3047 3618905 - 3619753 + | electron transport protein SCO1/SenC Acid345_3048 3620233 - 3619754 - | pyridoxamine 5'-phosphate oxidase-related, FMN-binding Acid345_3049 3620344 - 3622485 + | adenylate/guanylate cyclase Acid345_3050 3622548 - 3623354 + | hypothetical protein Acid345_3051 3626212 - 3623528 - | glycogen/starch/alpha-glucan phosphorylase TERM 2771 3624457 - 3624488 + g 86 -5.1 -5.2291 | gap 1, opp_overlap 3624472, overlap 3624459 TATAGACCTGCACGC CAGTCTGGTCGAAG ATGAC CTTCG-CCAGCCGG TTTTTGTTGTGCTGT TERM 2772 3624647 - 3624665 + g 72 -6.7 -4.3587 | gap 1 CGATTTGTGCAGCCA CGGCCGTG GGGC CACG-CCG TTTGTCTTATTGCTG TERM 2773 3624785 - 3624805 + g 74 -13.3 -2.57881 | overlap 3624788 GCTTCCGATGATCGC CAGGTGCGC CAT GCGCACTTG CTTGTCCGCGGCTTC TERM 2774 3624788 - 3624802 + g 73 -11.4 -3.44146 | overlap 3624785 TCCGATGATCGCCAG GTGCGC CAT GCGCAC TTGCTTGTCCGCGGC Acid345_3052 3627356 - 3626277 - | TPR repeat-containing protein TERM 2775 3627399 - 3627415 + r 78 -5.8 -4.77165 | ACCGACGGGCCTTAG GGGGAC CAACA GTTCCC TTTTATTATCGCAGA Acid345_3053 3630171 - 3627421 - | hypothetical protein Acid345_3054 3630823 - 3630218 - | uridine kinase Acid345_3055 3631662 - 3630820 - | purine nucleoside phosphorylase I, inosine and guanosine-specific Acid345_3056 3632911 - 3631655 - | Na+ dependent nucleoside transporter Acid345_3057 3633696 - 3632983 - | deoxyribose-phosphate aldolase Acid345_3058 3634264 - 3633746 - | hypoxanthine phosphoribosyltransferase TERM 2776 3634158 - 3634135 - G 82 -6.6 -4.83615 | GATCGCTCAGAAAAA TCGCCGCGCC CTTG AGCACGCCGA TCAGCACCACCGGCT TERM 2777 3635104 - 3635053 - g 76 -5.1 -4.72986 | gap 3, overlap 3635055 3635056 3635071 CACCGGCAGCAAAAA CATCGCCGAAGC-C-GAACAGCAGCG CGA CGCCGCTCTCCAGTGCACCGGCG-CG AAACCGGAGCCTGCC Acid345_3059 3634391 - 3635920 + | adenosine deaminase TERM 2778 3635952 - 3635928 - T 72 -12.2 -2.6155 | overlap 3635927 GCTGGTAACAGTAAG GGGGCAATCC TTATC GAATTGCCCC ACCTCGCAAACTTAT Acid345_3060 3636250 - 3635975 - | hypothetical protein Acid345_3061 3637090 - 3636401 - | two component transcriptional regulator Acid345_3062 3639075 - 3637087 - | periplasmic sensor signal transduction histidine kinase TERM 2779 3637223 - 3637235 + g 72 -4.8 -4.56597 | AATGATCCGTTCATC GCCT CCGCC AGGC TTTTTGCCAGCGGCA Acid345_3063 3640525 - 3639230 - | ABC multidrug efflux pump, inner membrane subunit TERM 2780 3640263 - 3640274 + g 74 -2.2 -4.91109 | gap 1, overlap 3640243 3640263 GTGTAGTCTGGCTTC GG-CG CTT CGTCC TTTTTATCCTCCGGG Acid345_3064 3641469 - 3640522 - | ABC transporter, ATPase subunit Acid345_3065 3641583 - 3643298 + | electron-transferring-flavoprotein dehydrogenase TERM 2781 3643320 - 3643341 + T 100 -15.9 -4.70169 | CCAAGAAGCCTTCTG GCACGACGC GAAA GCGTCGTGC TTTTCTTCACTCTGC Acid345_3066 3644820 - 3643348 - | amidohydrolase TERM 2782 3644921 - 3644954 + H 84 -6 -5.00616 | overlap 3644925 GGGGGAGGGCTGCCG TCG-GCGCCCTGTGGC GAAA GCC-CGGGGCGTTTGA TTTTTTGGGCGAGAC TERM 2783 3644925 - 3644949 + H 93 -11.4 -4.42765 | gap 1, overlap 3644921 GAGGGCTGCCGTCGG CGCCCTGTGGC GAAA GCC-CGGGGCG TTTGATTTTTTGGGC Acid345_3067 3645162 - 3645491 + | thioredoxin TERM 2784 3645538 - 3645508 - T 72 -2.6 -4.87665 | gap 2, opp_overlap 3645509 3645510 3645514, overlap 3645509 3645510 GCGCACCTATAAAAA GTTCAAGCCCAGCC GCAAA GGCTGGGCTTC--C TATTTTCTTCTGTCA TERM 2785 3645509 - 3645540 + T 75 -3.7 -4.85918 | gap 1, opp_overlap 3645508 3645509 3645510, overlap 3645510 3645514 CGCACCTATAAAAAG T-TCAAGCCCAGCC GCAAA GGCTGGGCTTCCTA TTTTCTTCTGTCATC TERM 2786 3645510 - 3645538 + T 76 -8.8 -4.03793 | opp_overlap 3645508 3645509 3645510, overlap 3645509 3645514 GCACCTATAAAAAGT TCAAGCCCAGCC GCAAA GGCTGGGCTTCC TATTTTCTTCTGTCA TERM 2787 3645514 - 3645534 + T 95 -14 -3.6201 | opp_overlap 3645508 3645510 3645509, overlap 3645510 3645509 CTATAAAAAGTTCAA GCCCAGCC GCAAA GGCTGGGC TTCCTATTTTCTTCT Acid345_3068 3647459 - 3645621 - | serine phosphatase Acid345_3069 3647573 - 3648814 + | tyrosyl-tRNA synthetase Acid345_3070 3648832 - 3649533 + | hypothetical protein Acid345_3071 3649614 - 3651305 + | hypothetical protein TERM 2788 3651596 - 3651571 - g 74 -6.9 -4.36914 | gap 1, opp_overlap 3651570 GCCGGCGTCAGAAAA TTCGCTTG-CGG ACT CGGTCAAGCGAA GTCTCTGCGCTCACA Acid345_3072 3651448 - 3651801 + | DGPFAETKE domain-containing protein Acid345_3073 3652756 - 3651839 - | zinc-binding alcohol dehydrogenase Acid345_3074 3652985 - 3654016 + | transposase IS116/IS110/IS902 Acid345_3075 3655022 - 3654507 - | hypothetical protein TERM 2789 3656356 - 3656335 - g 71 -11.5 -3.25823 | opp_overlap 3656332 TGGTTTCGACAGCAA CCGTGGCCG CTAT CGGCAACGG GTCGTCGTTCCGCAA Acid345_3076 3655653 - 3656684 + | transposase IS116/IS110/IS902 Acid345_3077 3657478 - 3657014 - | hypothetical protein TERM 2790 3657105 - 3657085 - G 74 -6.7 -4.41348 | CCTTCGCCAAAGAAA GCACCCGTC CGG GGCGGTTGC AGCCTTCCAAGACCT Acid345_3078 3657644 - 3659332 + | gamma-glutamyltransferase 2 Acid345_3079 3660271 - 3659462 - | hypothetical protein Acid345_3080 3661172 - 3660264 - | ABC transporter, ATPase subunit TERM 2791 3662368 - 3662354 - R 90 -6.4 -5.15969 | GCCGAAGGTAAAAAA TTGCCG CGA CAGCAA ATAACACAATGCCAG Acid345_3081 3662939 - 3662535 - | OsmC-like protein Acid345_3082 3663467 - 3662955 - | ECF subfamily RNA polymerase sigma-24 factor Acid345_3083 3664047 - 3663499 - | rhodanese/sulfurtransferase-like protein Acid345_3084 3664166 - 3665197 + | sphingosine kinase related enzyme Acid345_3085 3665323 - 3666219 + | TonB-like protein TERM 2792 3666239 - 3666257 + T 100 -13.8 -5.08255 | opp_overlap 3666233 GTTCAAAAAGGCGCT GGCGCGGG CAA TCCGCGCC TTTTCTTTTCCAGGT Acid345_3086 3667095 - 3666727 - | hypothetical protein Acid345_3087 3668121 - 3667183 - | PAS sensor signal transduction histidine kinase TERM 2793 3667684 - 3667705 + g 74 -11.5 -3.53444 | ATCGGGATGGCGTTT GCCGGGCTC GTTG GAGACCGGC TTTCCAGCGCGCTCC Acid345_3088 3668401 - 3671232 + | TPR repeat-containing serine/threonin protein kinase Acid345_3089 3672115 - 3671531 - | TetR family transcriptional regulator TERM 2794 3671573 - 3671583 + g 74 -8.2 -4.16842 | GAGGATGTCTACCAG GCGC TTG GCGC TTTGTTGCCAATCGG TERM 2795 3672200 - 3672216 + H 86 -12.3 -3.80945 | GTAAATATCTTGCAA CCGGAGA CTG TCTCCGG TTATCTTATCTCCTA TERM 2796 3672235 - 3672249 + H 78 -7.1 -4.67982 | opp_overlap 3672235 3672234, overlap 3672225 3672230 TCTTATCTCCTAAAT CGGAG ATATC CTCCG TTTTATTCGATGAGG Acid345_3090 3672330 - 3673217 + | NAD-dependent epimerase/dehydratase Acid345_3091 3673221 - 3673460 + | hypothetical protein TERM 2797 3673488 - 3673507 + F 100 -10.7 -5.88476 | opp_overlap 3673488 3673485 CATGTCGGTAAAGCA GGGCGCA AAAGTA TGCGCCC TTTTTTATTTGTTTT Acid345_3092 3673699 - 3674928 + | hypothetical protein Acid345_3093 3675039 - 3675701 + | type IV pilus assembly PilZ TERM 2798 3675721 - 3675740 + T 85 -9.2 -4.4267 | TCTCGCTACGCGTGC GGGACGGC TGAA GCCGTGCC TTTTCACTTTTGGCG TERM 2799 3675861 - 3675874 + T 100 -9.5 -5.45802 | CGCGACGCATTTGCA GGGGC TGAA GCCCC TTTTTCTTTTGCGGC TERM 2800 3676091 - 3676104 + T 100 -9.5 -5.45802 | AGCGACGCATTTACA GGGGC TGAA GCCCC TTTTTCTTTTGCGGC Acid345_3094 3677782 - 3676184 - | EmrB/QacA family drug resistance transporter Acid345_3095 3679097 - 3677865 - | secretion protein HlyD Acid345_3096 3680593 - 3679100 - | outer membrane efflux protein TERM 2801 3680797 - 3680807 + H 70 -3.2 -4.7078 | GGAATTGGGATGGGC GGGT GCA ACTC TTTTTGAATGATTCC TERM 2802 3680958 - 3680970 + G 85 -10.5 -4.386 | overlap 3680956 3680964 CGCTTTACCTGGTGA CCGGC GCG GCCGG TTTTATCGGCCGTTC TERM 2803 3680964 - 3680982 + G 73 -12.4 -3.17075 | overlap 3680956 3680958 ACCTGGTGACCGGCG CGGCCGGT TTT ATCGGCCG TTCAATTGCGCAGCA Acid345_3097 3680939 - 3681907 + | NAD-dependent epimerase/dehydratase TERM 2804 3682590 - 3682578 - g 71 -7.7 -3.97102 | overlap 3682571 ACTGAAAACGAAGAA GTACG CGG CGTAC ATCGTAGAGCCGGTG Acid345_3098 3682018 - 3683367 + | aminotransferase Acid345_3099 3683398 - 3684105 + | two component transcriptional regulator TERM 2805 3684371 - 3684391 + G 70 -3.9 -4.59773 | overlap 3684376 CACGAAACCGAGGAC GAGAACCGG AAC TCGGTGTTC TTTTTGCAAATCGAC Acid345_3100 3684086 - 3685516 + | periplasmic sensor signal transduction histidine kinase TERM 2806 3685554 - 3685578 + G 70 -12.1 -2.73159 | overlap 3685553 GATGGCAGTAGTCGG CGCGACCGCAG CGC CTGCAGTTGCG ATTTGCGGAGCTTCG Acid345_3101 3685513 - 3686343 + | hypothetical protein Acid345_3102 3686495 - 3687325 + | Alpha/beta hydrolase Acid345_3103 3687986 - 3687408 - | hypothetical protein Acid345_3104 3689104 - 3687983 - | monooxygenase, FAD-binding TERM 2807 3688391 - 3688420 + g 70 -2.7 -4.83615 | gap 1, overlap 3688398 TGTGATGGCTCCCTG CTCGCGGCTGCTGG CGT TC-GCGCCCGAGAG TTTTTCTGCGAGCTC Acid345_3105 3690158 - 3689109 - | chalcone and stilbene synthases-like TERM 2808 3689195 - 3689165 - G 70 -11.9 -2.71364 | gap 1, overlap 3689167 CCATGGCTGCAAGGA CACTGAGCGTCCCG GGAG CGGGACGCTG-GTG GTGATAAATGTTTTC TERM 2809 3689541 - 3689516 - G 91 -7.5 -5.24129 | gap 1, opp_overlap 3689515 3689516, overlap 3689517 3689520 3689536 TGTCGGGATAAAAAA CCGAGCGCGTCG CGA CGACACGCG-GG CCGTGCTGGGCTTTG TERM 2810 3689538 - 3689520 - G 71 -12.4 -2.96157 | opp_overlap 3689516 3689515, overlap 3689516 3689517 3689536 GGGATAAAAAACCGA GCGCGTCG CGA CGACACGC GGGCCGTGCTGGGCT TERM 2811 3690364 - 3690345 - R 100 -13.6 -5.95449 | AAACAAAATAAAAAA GGCGACAC CTTG GTGTCGCC TTCCCAGTTCCGGAG Acid345_3106 3691436 - 3690399 - | ketol-acid reductoisomerase Acid345_3107 3692023 - 3691478 - | acetolactate synthase, small subunit Acid345_3108 3693749 - 3692034 - | acetolactate synthase, large subunit, biosynthetic type Acid345_3109 3695473 - 3693752 - | dihydroxy-acid dehydratase TERM 2812 3695530 - 3695504 - H 74 -2.9 -4.88736 | overlap 3695505 GAGTACCTATAAAAA TGCGCTCCC CGAGACAGC GAGAGCGCC GTGCAATCGTTAGCT TERM 2813 3695875 - 3695854 - H 81 -13.7 -2.99849 | opp_overlap 3695854, overlap 3695851 CAAGAATCCAAACGA GCCGCGACC CACA AGTCGCGGC TTTTGCTTTGCAGGG TERM 2814 3695854 - 3695875 + H 100 -13 -4.54727 | opp_overlap 3695851 3695854 CAAGAATCCAAACGA GCCGCGAC CCACAA GTCGCGGC TTTTGCTTTGCAGGG Acid345_3110 3695932 - 3696954 + | 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase TERM 2815 3696967 - 3696998 + F 100 -17.4 -4.1822 | overlap 3696962 3696989 TAGATTCTCTCCGCG GCGGGAGGCGAT CGCGGTAT ATCGCCTCCCGC TTTGTTGCAATCGGG Acid345_3111 3697059 - 3697520 + | (2Fe-2S)-binding protein TERM 2816 3698414 - 3698404 - g 77 -2.4 -5.06414 | opp_overlap 3698404, overlap 3698405 GGCGGCGAAGAAAAA GGGC GTG GCGC TGTTCAATGCCGGAG TERM 2817 3699546 - 3699571 + G 79 -12.5 -3.29043 | opp_overlap 3699519, overlap 3699519 3699564 CGGGGATTGGGGAGC CTCCGGTGCCA CCGA TGGCGCCGGCG TTGTGCGGGGCGATT Acid345_3112 3697517 - 3699634 + | aldehyde oxidase and xanthine dehydrogenase molybdopterin binding Acid345_3113 3699743 - 3701026 + | FAD dependent oxidoreductase Acid345_3114 3702359 - 3701019 - | amino acid transporter Acid345_3115 3702809 - 3702441 - | hypothetical protein Acid345_3116 3705470 - 3702834 - | TPR repeat-containing serine/threonin protein kinase Acid345_3117 3707384 - 3705552 - | excinuclease ABC subunit C TERM 2818 3706502 - 3706488 - G 70 -4.2 -4.66609 | opp_overlap 3706498, overlap 3706490 GAGCGTACTGAAAAA CTCACC GGT GTTGAG GCCGCCAGTGGCTTC TERM 2819 3707312 - 3707322 + g 87 -8.2 -4.84359 | CCACGTAAATGATCT CGCC CTC GGCG TTTTTGTAGAGGTAC Acid345_3118 3707723 - 3708451 + | OmpA/MotB family outer membrane protein TERM 2820 3708484 - 3708507 + T 100 -16.8 -4.40003 | ATTGGGTGAGGGAGA GGGCACGATC TTCG GATCGTGCCC TTTGTGTTTCTACGG Acid345_3119 3709860 - 3708517 - | hypothetical protein Acid345_3120 3711436 - 3710045 - | hypothetical protein Acid345_3121 3712188 - 3711568 - | hypothetical protein TERM 2821 3711765 - 3711784 + g 86 -5.6 -5.07652 | opp_overlap 3711763, overlap 3711768 CCGCAGTGATGAACG GCGGGACG ACGA CGTCCTTC TTTTCTTTTGACGGC TERM 2822 3711768 - 3711781 + g 83 -8.1 -4.6313 | opp_overlap 3711763, overlap 3711765 CAGTGATGAACGGCG GGACG ACGA CGTCC TTCTTTTCTTTTGAC TERM 2823 3712312 - 3712328 + H 70 -6.5 -4.12296 | overlap 3712314 ATCCGCGGAGTTCAG CCGATGC GCC GCATCTG TTCTTTCGTTCTCGC Acid345_3122 3712315 - 3715758 + | glycosyl hydrolases 38-like Acid345_3123 3716006 - 3715755 - | hypothetical protein Acid345_3124 3716120 - 3717016 + | LysR family transcriptional regulator Acid345_3125 3717053 - 3717538 + | hypothetical protein TERM 2824 3717561 - 3717543 - T 100 -16 -5.24531 | opp_overlap 3717536 ATCCCCGATAAAAAA GCCCTCGC GAC GCGAGGGC TTCAGGATTTCCCGC Acid345_3126 3719484 - 3717583 - | polysaccharide biosynthesis protein CapD TERM 2825 3718504 - 3718489 - G 70 -2.5 -4.72272 | gap 1, overlap 3718490 3718491 GTCGGCTACGAAAAA CGCCGC CGCAT GCGG-G TTCGGGAAATCCAGC Acid345_3127 3720604 - 3719819 - | methyltransferase type 11 Acid345_3128 3720879 - 3722327 + | hypothetical protein Acid345_3129 3722649 - 3722876 + | hypothetical protein TERM 2826 3722897 - 3722914 + F 100 -14.1 -4.51238 | ACCTGGATCGCAGAG GGCCGCC GGTA GGCGGCC TTTCTCTTTTCTGCA Acid345_3130 3723115 - 3723729 + | hypothetical protein Acid345_3131 3723768 - 3724805 + | phosphate transporter TERM 2827 3725440 - 3725453 + G 70 -3.8 -4.56597 | opp_overlap 3725440 CGTGGAGGCGGAAGA CCTC ACCTCC GAGG TTTTTCACCAGGCAC Acid345_3132 3725288 - 3725821 + | ECF subfamily RNA polymerase sigma-24 factor TERM 2828 3726083 - 3726110 + G 75 -9 -3.99324 | gap 1 GCGCAGCCCGTTCGG CGCCTCGGC-CGC ACT GCACGCCGCGGCG TTTCTGCTCATCGCA Acid345_3133 3725814 - 3726842 + | TonB-like protein Acid345_3134 3727803 - 3727291 - | hypothetical protein TERM 2829 3727536 - 3727515 - G 74 -2.3 -4.99043 | gap 1, overlap 3727516 TTCCGACAAACAAAA TTGCGAGCAT CAG ATGCGCG-AA CGCGAGCCAATCGGT TERM 2830 3727745 - 3727763 + g 72 -4.4 -4.58663 | opp_overlap 3727737, overlap 3727746 AGACCAACGATTACG ATCGCGAG GCA CACGCGAA TTTTTCGCAGCTCAT Acid345_3135 3729272 - 3727800 - | radical SAM family Fe-S protein TERM 2831 3728388 - 3728406 + g 75 -10.2 -3.66732 | CACCGCCTTGTAGTC GCGGCCGA GGT TCTGCCGC TTGTTGCACTGCTTC Acid345_3136 3730030 - 3729260 - | undecaprenyl pyrophosphate synthetase TERM 2832 3729436 - 3729411 - G 72 -9.7 -3.66999 | ATGCACGGAGTGAAA TGGAACTCCGC GTAA GCGGACTCCCA CAGCAGGAAGTCGGA Acid345_3137 3730438 - 3730055 - | hypothetical protein Acid345_3138 3731042 - 3730428 - | hypothetical protein TERM 2833 3730546 - 3730527 - G 71 -11.4 -3.32343 | CGCATATGGCGAGAA CGCCCGCA CGTC TGCGAGCG AGAGACAGACGAGGC Acid345_3139 3731910 - 3731257 - | carbonic anhydrase TERM 2834 3731947 - 3732005 + H 79 -12.5 -2.95789 | opp_overlap 3731947, overlap 3732000 TGCGAACAGTGAAAA CCGGCG-GTGGGCGCGCGAGAACTCGT AGTATTG AC-AGTTCGCGCGCGTCCAAGCGGCGG TCTCCTTCGTCTAAT TERM 2835 3732005 - 3731947 - H 90 -10.3 -4.28254 | opp_overlap 3731947 3732000 TGCGAACAGTGAAAA CCGGCGGT-GGGCGCGCGAGAACTCGT AGTATTG AC-AGTTCGCGCGCGTCCAAGCGGCGG TCTCCTTCGTCTAAT Acid345_3140 3732054 - 3733217 + | GTP cyclohydrolase II / 3,4-dihydroxy-2-butanone 4-phosphate synthase TERM 2836 3733306 - 3733279 - T 100 -15.6 -3.85864 | opp_overlap 3733279 TCAGGATGACAAGAA CGCCGCTGGATA CTCA TCTCCAGCGGCG TTTCTTTGTGCACAG TERM 2837 3733279 - 3733306 + T 100 -15.6 -4.55295 | opp_overlap 3733279 TCAGGATGACAAGAA CGCCGCTGGATA CTCA TCTCCAGCGGCG TTTCTTTGTGCACAG Acid345_3141 3735351 - 3733333 - | physarolisin II TERM 2838 3735465 - 3735486 + H 73 -5.3 -4.56367 | gap 1 GCCCCTGGGGAATTT GTATTG-TCA ACT TGAACAATAC TTTATTTATAAAATC TERM 2839 3736210 - 3736196 - g 77 -7.8 -4.30987 | ACGCTCCATAAGAAA GAGGGC TAC ACCCTC AACGCGGCTAACGAG Acid345_3142 3735740 - 3737167 + | L-glutamine synthetase TERM 2840 3737188 - 3737209 + T 100 -13.7 -5.06414 | TGTAGTTTTGCGAGA CGCCGTGGC GAGA GTCACGGCG TTTTTATTGCCGCGC Acid345_3143 3737566 - 3737213 - | type IV pilus assembly PilZ Acid345_3144 3739442 - 3737670 - | beta-lactamase Acid345_3145 3739507 - 3739914 + | hypothetical protein Acid345_3146 3740692 - 3739937 - | type IV pilus assembly PilZ TERM 2841 3740714 - 3740737 + r 75 -11.1 -3.31792 | CTCGGATGGGCCCAA GCCGAATTC GGGACG GAATTCGGC TTATGAAGCTGCTAG Acid345_3147 3742509 - 3741166 - | hypothetical protein Acid345_3148 3743399 - 3742506 - | hypothetical protein Acid345_3149 3744649 - 3743486 - | phage integrase Acid345_3150 3745521 - 3745261 - | hypothetical protein TERM 2842 3745453 - 3745435 - G 72 -9.6 -3.75024 | GCCCACCACGAAGAA CACCACCA CCG TGGTGATG CCGCGCGAGAACGAT TERM 2843 3745510 - 3745492 - G 71 -7.3 -4.11216 | GTCGGATTGGTAAAA CCCGGCG AGGAA CGCCGCG AACTTCAACATATCG Acid345_3151 3746125 - 3745532 - | hypothetical protein Acid345_3152 3746534 - 3746109 - | hypothetical protein Acid345_3153 3746976 - 3746539 - | hypothetical protein TERM 2844 3746925 - 3746896 - G 71 -11.5 -3.21099 | overlap 3746899 GTCCTCGAGGATGAA GCACTCCATCTCG CCAT CGAGATAGAGCAC ACCGACCGTCGCGTA TERM 2845 3746922 - 3746899 - G 70 -11.8 -2.80016 | overlap 3746896 CTCGAGGATGAAGCA CTCCATCTCG CCAT CGAGATAGAG CACACCGACCGTCGC Acid345_3154 3747364 - 3746987 - | hypothetical protein TERM 2846 3747400 - 3747427 + r 76 -9.2 -3.92542 | gap 1, overlap 3747401 AGTGGTACAGCACTT ACTTTCCGACCGG GAT CCGGTCG-AAAGC TTCTTTCACGATCAG TERM 2847 3747401 - 3747426 + r 79 -12.7 -2.95204 | gap 1, overlap 3747400 GTGGTACAGCACTTA CTTTCCGACCGG GAT CCGGTCG-AAAG CTTCTTTCACGATCA Acid345_3155 3747778 - 3747398 - | hypothetical protein Acid345_3156 3750579 - 3747775 - | hypothetical protein TERM 2848 3748338 - 3748361 + g 74 -13.8 -2.66316 | overlap 3748335 AGGCCTGGTAGGTTT GCGGGCCACC AGCG GGTGGCACGC TGCTGTCGTCAAAGA TERM 2849 3750143 - 3750158 + g 77 -10.4 -3.90112 | overlap 3750114 TCGACCTTGACGACG CCGGCA TACT TGCCGG TTTCATTGCCCGACC Acid345_3157 3751011 - 3750580 - | hypothetical protein Acid345_3158 3751634 - 3751008 - | hypothetical protein TERM 2850 3751074 - 3751050 - G 77 -12.2 -3.54543 | gap 1 AGGCACTGGCGGAAA CACC-GGGGCA CCCT TGCCCCAGGTG ATACTCAGACTCTGC Acid345_3159 3752302 - 3751634 - | hypothetical protein Acid345_3160 3755011 - 3752312 - | hypothetical protein Acid345_3161 3757494 - 3755008 - | hypothetical protein TERM 2851 3755886 - 3755907 + g 70 -2.2 -4.78107 | gap 1, overlap 3755903 CGGTAGTGTCTTTGC CGGCCGCCT GCAGG ATGCG-CCG TTTTTCGTCGTACTC Acid345_3162 3757975 - 3757487 - | hypothetical protein Acid345_3163 3758274 - 3757972 - | hypothetical protein Acid345_3164 3758684 - 3758277 - | hypothetical protein Acid345_3165 3758956 - 3758681 - | hypothetical protein TERM 2852 3759128 - 3759099 - R 95 -10.7 -4.56597 | overlap 3759100 3759101 CGTTTCTTCCAAAAA TCGGGCAGGACGA TTGC TCATCCTGCCCAG CGTCGTCGTCCCTTA TERM 2853 3759127 - 3759100 - R 95 -14.2 -3.33744 | overlap 3759099 3759101 GTTTCTTCCAAAAAT CGGGCAGGACGA TTGC TCATCCTGCCCA GCGTCGTCGTCCCTT TERM 2854 3759126 - 3759101 - R 85 -15.5 -2.60032 | overlap 3759100 3759099 TTTCTTCCAAAAATC GGGCAGGACGA TTGC TCATCCTGCCC AGCGTCGTCGTCCCT Acid345_3166 3759566 - 3759141 - | hypothetical protein Acid345_3167 3759985 - 3759632 - | hypothetical protein TERM 2855 3760053 - 3760011 - R 80 -8.9 -4.11216 | opp_overlap 3760010 3760050, overlap 3760012 TTCGTACTTTCAAAA TCTCCGGGGCGTTTCCGGG ATCCG CCCGCTACCGCCCCTGAGC ACTGCTCTCTTTAGG TERM 2856 3760052 - 3760012 - R 76 -12.4 -3.06515 | opp_overlap 3760010 3760050, overlap 3760011 TCGTACTTTCAAAAT CTCCGGGGCGTTTCCGGG ATCCG CCCGCTACCGCCCCTGAG CACTGCTCTCTTTAG Acid345_3168 3760416 - 3760105 - | hypothetical protein Acid345_3169 3760871 - 3760413 - | hypothetical protein TERM 2857 3760894 - 3760915 + r 83 -7.9 -4.55295 | ACCTTCGCTAAGCGC GCGACGCTC ACCA GGCCGTCGC TTTCTTTGTCCACCG Acid345_3170 3761207 - 3760872 - | hypothetical protein Acid345_3171 3761578 - 3761207 - | hypothetical protein TERM 2858 3761625 - 3761600 - R 83 -11.7 -3.65827 | opp_overlap 3761602, overlap 3761601 GAACTCCGAGTGAAA TTCCCGGCGGC ACAG GCCGCCGGGTT TCTTGCCTAGTTGCC TERM 2859 3761624 - 3761601 - R 83 -15.2 -2.79175 | opp_overlap 3761602, overlap 3761600 AACTCCGAGTGAAAT TCCCGGCGGC ACAG GCCGCCGGGT TTCTTGCCTAGTTGC TERM 2860 3761602 - 3761623 + r 100 -18.7 -4.23045 | opp_overlap 3761601 3761600 ACTCCGAGTGAAATT CCCGGCGGC ACAG GCCGCCGGG TTTCTTGCCTAGTTG Acid345_3172 3762078 - 3761632 - | hypothetical protein Acid345_3173 3764501 - 3762156 - | peptidase S49 TERM 2861 3762779 - 3762759 - G 71 -11.1 -3.21747 | opp_overlap 3762750 3762773 GGACTGGATGATGAA CTGACGGCT GTA AGCCGTCTG CGCCATCGCCTGCTT TERM 2862 3763528 - 3763541 + g 75 -5.9 -4.56597 | overlap 3763529 GCCTCCTCTGTGATT TCGGC TGAC GCCGG TTTTTCGGCCACCGA TERM 2863 3764033 - 3763999 - G 71 -11.2 -3.21912 | opp_overlap 3763998, overlap 3764002 GCGGCAAGCCAGTAA GCAGCGCTGGCAGCGC GCG GCGCGACCTGCGCGAC AATCTTCTTTTTCCC TERM 2864 3764030 - 3764002 - G 76 -13.7 -2.8007 | opp_overlap 3763998, overlap 3763999 GCAAGCCAGTAAGCA GCGCTGGCAGCGC GCG GCGCGACCTGCGC GACAATCTTCTTTTT Acid345_3174 3766108 - 3764498 - | phage portal protein, lambda Acid345_3175 3766713 - 3766108 - | hypothetical protein Acid345_3176 3769057 - 3766976 - | phage terminase GpA Acid345_3177 3769697 - 3769257 - | hypothetical protein Acid345_3178 3770150 - 3769911 - | hypothetical protein Acid345_3179 3770514 - 3770140 - | hypothetical protein Acid345_3180 3770744 - 3770511 - | hypothetical protein Acid345_3181 3771388 - 3770741 - | hypothetical protein TERM 2865 3771545 - 3771496 - R 72 -11.6 -3.05463 | gap 3 AGTGGGTGCAGGCAA TCTGCAGGATG-CG-GGTCGCGTCG GTG CG-CACAACCTCGACTTCCTGCAGA ACGGGGTATTCACAG Acid345_3182 3772146 - 3771571 - | hypothetical protein TERM 2866 3772029 - 3772000 - G 71 -10 -3.48276 | gap 1, overlap 3772001 GTCCGTCGCACAGAA CGCC-GAGCGCGA TCGCT TCGCGCCCTGGCA CGCCGGACAAACCGT Acid345_3183 3772777 - 3772187 - | hypothetical protein Acid345_3184 3773709 - 3772744 - | hypothetical protein TERM 2867 3773265 - 3773280 + gr 79 -6.8 -4.58283 | overlap 3773275 TCTGCAACCCTTCTG CTACCC TTTC GGGTGG TTTTTGCGACCCTTC TERM 2868 3773373 - 3773355 - GR 100 -8.8 -5.00616 | opp_overlap 3773355 CTGCGGGCGAAAAAA GGGTGGCA CCA TGCGACCC TTTTCCTGAAGCAAG TERM 2869 3773355 - 3773373 + gr 84 -8.8 -4.25104 | opp_overlap 3773355 CTGCGGGCGAAAAAA GGGTGGCA CCA TGCGACCC TTTTCCTGAAGCAAG Acid345_3185 3774385 - 3773882 - | hypothetical protein Acid345_3186 3774869 - 3774438 - | hypothetical protein Acid345_3187 3775555 - 3774878 - | hypothetical protein Acid345_3188 3776390 - 3775854 - | hypothetical protein Acid345_3189 3777291 - 3776494 - | hypothetical protein TERM 2870 3777678 - 3777667 - R 71 -5.8 -4.22883 | CACCAGCGAAAACAA CTCG AACA CGAG CACCAGAACTACCCG Acid345_3190 3778162 - 3777857 - | response regulator receiver protein TERM 2871 3778215 - 3778184 - R 89 -9.4 -4.65895 | overlap 3778185 3778202 CCCGGGAGGGAAAAA TGAGCGGACGGT CATAAAGC ACCGCCCGCTCC GGAGGGTGCTACTCC TERM 2872 3778214 - 3778185 - R 84 -12.9 -3.39216 | overlap 3778184 3778202 CCGGGAGGGAAAAAT GAGCGGACGGT CATAAAGC ACCGCCCGCTC CGGAGGGTGCTACTC TERM 2873 3778224 - 3778202 - R 82 -11.2 -3.87815 | overlap 3778185 3778184 GCGGACGGTCATAAA GCACCGCCCG CTC CGGAGGGTGC TACTCCCGAGCTTGA Acid345_3191 3778668 - 3778195 - | hypothetical protein Acid345_3192 3778916 - 3778665 - | hypothetical protein TERM 2874 3778918 - 3778970 + r 83 -12 -3.63694 | opp_overlap 3778919, overlap 3778919 3778967 ATGAATTTCGACACT AGCGGCCTCC-CTTCTTCGCCGACAG GTT CT-TCGGCTTCGAAGCGGAGGCCGCC TTCTTAGGGGTAGCT TERM 2875 3778969 - 3778919 - R 85 -15.5 -2.63631 | opp_overlap 3778919 3778918 3778967 TGAATTTCGACACTA GCGGCCTCC-CTTCTTCGCCGACAG GTT CT-TCGGCTTCGAAGCGGAGGCCGC CTTCTTAGGGGTAGC TERM 2876 3778919 - 3778969 + r 86 -15.5 -2.77895 | opp_overlap 3778919, overlap 3778918 3778967 TGAATTTCGACACTA GCGGCCTCC-CTTCTTCGCCGACAG GTT CT-TCGGCTTCGAAGCGGAGGCCGC CTTCTTAGGGGTAGC Acid345_3193 3780709 - 3778916 - | parB-like partition proteins Acid345_3194 3781889 - 3781059 - | hypothetical protein Acid345_3195 3783246 - 3781927 - | hypothetical protein TERM 2877 3784342 - 3784368 + G 72 -5 -4.57073 | overlap 3784338 CTTGTGTTTGTGGGC GTGGCCGCGC TGTTTGT GCTCGACCAC TTTTTCCACGGAATC Acid345_3196 3783577 - 3784386 + | zinc/iron transporter Acid345_3197 3784630 - 3784388 - | hypothetical protein TERM 2878 3784507 - 3784490 - G 72 -9.1 -3.92869 | opp_overlap 3784500 CCAGTGATCGAGAAA GCGCAGC GAGC GCTGCAC GGCGTTGGGTGATTC Acid345_3198 3785759 - 3784677 - | translation-associated GTPase TERM 2879 3785349 - 3785361 + g 78 -9.1 -4.11216 | CAGGTCTTTTTCGAC GCGCT CCA AGCGC TTTTCGACCTGGCCG Acid345_3199 3786370 - 3785852 - | hypothetical protein TERM 2880 3786437 - 3786449 + H 70 -3.4 -4.77036 | TTCCTGCACCATCCC CTTG AATTA CAAG TTTTTAGTCCTGCGC TERM 2881 3786565 - 3786591 + G 75 -8.6 -4.09685 | overlap 3786554 3786553 TGCGACCGCCATTTT GGCGGGGTTGTT GTT GACCGCCCCGTC TTTTGCACAATCGAC Acid345_3200 3786536 - 3789010 + | hypothetical protein TERM 2882 3789029 - 3789048 + T 100 -15 -4.86731 | opp_overlap 3789027 3789026 TGAGTTAGCAAATGT GCCCGCTC TTCG GAGCGGGC TTTTCTTTAAACAGG Acid345_3201 3790014 - 3789055 - | ATPase TERM 2883 3790153 - 3790125 - R 82 -5.2 -5.07652 | gap 1, overlap 3790126 GTGCTCAAAAGAAAA TCGCACTCG-GCA GGTT CGCACGAGCGCGG TACAGGAGAAAGAAA TERM 2884 3790152 - 3790126 - R 70 -8.7 -3.63868 | gap 1, overlap 3790125 TGCTCAAAAGAAAAT CGCACTCG-GCA GGTT CGCACGAGCGCG GTACAGGAGAAAGAA Acid345_3202 3791125 - 3790169 - | HtpX-2 peptidase Acid345_3203 3791183 - 3791611 + | hypothetical protein TERM 2885 3791621 - 3791639 + T 83 -13.1 -3.25356 | opp_overlap 3791621, overlap 3791616 ATCTGAAAAGCAAAA GCCCCGC ACGCG GCGGGGC TTCACTTACTTATCG TERM 2886 3791639 - 3791621 - T 100 -13.1 -4.67641 | opp_overlap 3791621 3791616 ATCTGAAAAGCAAAA GCCCCGC ACGCG GCGGGGC TTCACTTACTTATCG Acid345_3204 3792978 - 3791659 - | hypothetical protein TERM 2887 3792631 - 3792642 + g 71 -7.2 -4.1552 | GACGTTTACGGTGGT GCCG ACGT CGGC TTTCTTCACAACGTC Acid345_3205 3793366 - 3793019 - | hypothetical protein Acid345_3206 3793851 - 3793366 - | hypothetical protein Acid345_3207 3795881 - 3793851 - | cytochrome c assembly protein Acid345_3208 3796137 - 3796577 + | response regulator receiver protein Acid345_3209 3796942 - 3796574 - | response regulator receiver protein TERM 2888 3797100 - 3797111 + r 73 -5.8 -4.42238 | opp_overlap 3797100 CGAAAGCTCAGATGA CGGT CTAA ACCG TTTTAATTCAGCTCA Acid345_3210 3797401 - 3797135 - | hypothetical protein TERM 2889 3797583 - 3797554 - R 83 -9.9 -4.08064 | opp_overlap 3797578, overlap 3797542 3797559 AATGGCCGCCCAAAA TGGAATGGCCTCC CGGA GGAGGCCACGCCT AGCGGTTCGCTCGGG TERM 2890 3797578 - 3797559 - R 88 -13.6 -3.36823 | overlap 3797542 3797554 CCGCCCAAAATGGAA TGGCCTCC CGGA GGAGGCCA CGCCTAGCGGTTCGC Acid345_3211 3799643 - 3797601 - | amidohydrolase Acid345_3212 3800977 - 3799721 - | aminopeptidase T Acid345_3213 3801059 - 3801811 + | adenylate kinase TERM 2891 3801833 - 3801849 + F 100 -9.4 -4.98531 | opp_overlap 3801833 TCCAGGGTTACACAA CGCGCA TTACC TGCGCG TTTTTCCTTTGCCCC Acid345_3214 3802726 - 3803799 + | TonB-like protein TERM 2892 3803838 - 3803826 - f 71 -7.7 -3.99374 | GGGGAGGAAGAAGAA GATGC GTG GCATC AGCAAGGCTTTAATC Acid345_3215 3803827 - 3805656 + | peptidase M48, Ste24p TERM 2893 3805697 - 3805723 + F 100 -11.5 -5.10461 | overlap 3805699 GTGCAGTAATCCCTC AAGGGCTCGCC TCTCC GGCGGGCCCTA TTTTTATTGCCTCGC TERM 2894 3805699 - 3805721 + F 100 -14.1 -4.17914 | overlap 3805697 GCAGTAATCCCTCAA GGGCTCGCC TCTCC GGCGGGCCC TATTTTTATTGCCTC TERM 2895 3806236 - 3806219 - g 75 -5.5 -4.60041 | overlap 3806220 AGCGATTCGCAAAAA TGCTTCG AACT CGAAGCC TGGCTCGGCGATGCC Acid345_3216 3805730 - 3806479 + | hypothetical protein Acid345_3217 3806555 - 3807115 + | hypothetical protein TERM 2896 3807127 - 3807154 + T 70 -9.8 -3.44284 | opp_overlap 3807130, overlap 3807125 3807129 3807130 CTAAATCGCAGAGAA AAAGGCCGCATC CGAA GATGCGGCCCTA TGTTCTTGATGCCAG TERM 2897 3807129 - 3807152 + T 78 -12.4 -3.29142 | opp_overlap 3807130, overlap 3807127 3807125 3807130 AAATCGCAGAGAAAA AGGCCGCATC CGAA GATGCGGCCC TATGTTCTTGATGCC TERM 2898 3807151 - 3807130 - T 100 -15.9 -4.98522 | opp_overlap 3807129 3807127 3807125 3807130 AATCGCAGAGAAAAA GGCCGCATC CGAA GATGCGGCC CTATGTTCTTGATGC TERM 2899 3807130 - 3807151 + T 85 -15.9 -2.57003 | opp_overlap 3807130, overlap 3807129 3807127 3807125 AATCGCAGAGAAAAA GGCCGCATC CGAA GATGCGGCC CTATGTTCTTGATGC Acid345_3218 3810397 - 3807170 - | hypothetical protein TERM 2900 3808382 - 3808358 - G 70 -2.1 -4.72272 | CTGTCCTACGAAAAA GTCCTGCGA GAATGCG TCGTAGAAC ATTCCATAGCCGGCG TERM 2901 3810679 - 3810667 - g 86 -9.1 -4.63486 | ATGTCGCCAACAAAA TCGCC GCC GGCGA GGTGGTCGAACGCCC Acid345_3219 3810624 - 3812567 + | DNA mismatch repair protein MutL TERM 2902 3812909 - 3812921 + G 71 -10.5 -3.53444 | opp_overlap 3812903 CGAAGCCAACGTCTT CGGCG AGA CGCCG TTCCTTGTTGCCGCC Acid345_3220 3812619 - 3813566 + | hypothetical protein Acid345_3221 3813563 - 3814246 + | cytidylate kinase Acid345_3222 3815884 - 3814250 - | TPR repeat-containing protein TERM 2903 3815013 - 3814994 - G 70 -3.6 -4.70453 | gap 1 AACCAACACACAAAA CGC-AACGA AGA TCATTAGCG GCAGAACGAATCTAG Acid345_3223 3817377 - 3815986 - | soluble pyridine nucleotide transhydrogenase TERM 2904 3817300 - 3817317 + g 72 -4.8 -4.57569 | gap 1, opp_overlap 3817312, overlap 3817304 TCGCTTGTGCAGTTT GGCAGCG CAAAT CGC-GCC TTTTTGGCCGGCTGG Acid345_3224 3817505 - 3818839 + | aminopeptidase P Acid345_3225 3818843 - 3819877 + | abortive infection protein Acid345_3226 3820169 - 3819867 - | hypothetical protein Acid345_3227 3820275 - 3820928 + | thymidylate kinase Acid345_3228 3820931 - 3821245 + | hypothetical protein TERM 2905 3821262 - 3821289 + T 74 -9.8 -3.62597 | opp_overlap 3821266, overlap 3821266 ACTAGTAGCGCAACA AAAAGGCCGCTC CTTC GAGCGGCCTTCC TTCTTGCAACCTCAG TERM 2906 3821266 - 3821285 + T 95 -15 -3.53444 | opp_overlap 3821266, overlap 3821262 GTAGCGCAACAAAAA GGCCGCTC CTTC GAGCGGCC TTCCTTCTTGCAACC TERM 2907 3821285 - 3821266 - T 100 -15 -5.08601 | opp_overlap 3821262 3821266 GTAGCGCAACAAAAA GGCCGCTC CTTC GAGCGGCC TTCCTTCTTGCAACC rho 3822580 - 3821333 - | transcription termination factor Rho TERM 2908 3822649 - 3822669 + r 86 -14 -2.91912 | overlap 3822641 3822629 TGGGGGCGCGAGCGG GGCGCGCT TATGC AGCGCGCC TCTGTCCCTCAATCG Acid345_3230 3827162 - 3823425 - | Ig-like, group 2 TERM 2909 3827277 - 3827258 - R 80 -9.3 -4.08216 | GTATGGGTTGCAAAA CGACGCA TGGGGG TGCGTCG CGGTGATCTCTAGCT Acid345_3231 3828211 - 3827303 - | hypothetical protein Acid345_3232 3828554 - 3828288 - | prevent-host-death protein Acid345_3233 3830139 - 3828598 - | Mg chelatase-related protein TERM 2910 3829891 - 3829905 + g 70 -4.2 -4.62441 | AGCCATCGGGAGATC GAAGCC AGA GCCTTC TTTCTTTATATCGGC TERM 2911 3830161 - 3830136 - G 75 -5.5 -4.56597 | gap 1, overlap 3830137 3830139 TCTTGGTGCGAAAAA GC-ATAAGGCCC CTA GAACCTTATAGC TATCAGGAATTGCGC Acid345_3234 3830390 - 3831670 + | type IV pilus assembly PilZ TERM 2912 3831688 - 3831715 + T 100 -21.4 -4.07568 | opp_overlap 3831692 CTCTACTTCGTCTAA CGAACAGCCCGC TTCG GCGGGCTGTTCG TTTTCCAGACGAGAG TERM 2913 3831711 - 3831692 - T 95 -15 -3.33815 | opp_overlap 3831688 ACTTCGTCTAACGAA CAGCCCGC TTCG GCGGGCTG TTCGTTTTCCAGACG TERM 2914 3831848 - 3831866 + T 76 -3.1 -5.00884 | opp_overlap 3831848 3831851, overlap 3831851 AGGCGGACGAAAAAG TGACGGT TTTGC ACCGTGA TTTTTTCCCCCGAAT TERM 2915 3831874 - 3831926 + T 75 -6.3 -4.56597 | opp_overlap 3831893, overlap 3831876 3831897 CACCGTGATTTTTTC CCCCGAATCGCGGAGAAAAC-GCGG CTGAA CCGCGGATTTCTT-GCGGGTCGGCG TTTTTGCCGCAAAGG TERM 2916 3831907 - 3831893 - T 85 -9.2 -4.386 | opp_overlap 3831876 3831874 3831897 GAATCGCGGAGAAAA CGCGGC TGA ACCGCG GATTTCTTGCGGGTC Acid345_3235 3832648 - 3832178 - | hypothetical protein TERM 2917 3834259 - 3834235 - g 72 -8.6 -3.9122 | gap 2 GACTTGTTGAAAGAA CGGTTCGCTGGC GAC GCCAGCG--CCG AGAAGCACGTGACGC Acid345_3236 3833032 - 3835209 + | multi-sensor hybrid histidine kinase Acid345_3237 3835282 - 3835563 + | hypothetical protein Acid345_3238 3835594 - 3835848 + | hypothetical protein TERM 2918 3835873 - 3835855 - T 100 -13.8 -4.98255 | opp_overlap 3835849 3835848 CGGCAATGAGAAAAA GCCCGGCA GTG CGCCGGGC TTCAACCTTGTTTAC Acid345_3239 3837096 - 3835897 - | acetyl-CoA acetyltransferase TERM 2919 3836344 - 3836364 + g 78 -8.9 -4.20516 | overlap 3836346 GATCGTCGAGGCATT GCCGGCAGT TAC GCTGCCGTC TTTCTTGAATGCGGG TERM 2920 3836346 - 3836362 + g 75 -10.1 -3.70307 | overlap 3836344 TCGTCGAGGCATTGC CGGCAGT TAC GCTGCCG TCTTTCTTGAATGCG TERM 2921 3837131 - 3837119 - H 70 -3.4 -4.82901 | GCTCCTGGATAAAAA CTGA AATTG TCAG TGGAGGACCGCGGGA Acid345_3240 3837257 - 3838024 + | abortive infection protein TERM 2922 3838391 - 3838362 - T 72 -12.1 -2.72344 | opp_overlap 3838362 3838361 3838384 CTCGAGCCTTAATGA CCATGGGGGACGC GACA GCGTCCCCCAAAA CTTTTGGGCATTTGT TERM 2923 3838432 - 3838448 + T 84 -13.7 -3.06183 | GGATCCTTCGACTGC GTCGCGC TGC GCGCGAC TTCGCTCAGGATGAC Acid345_3241 3839158 - 3838454 - | hypothetical protein TERM 2924 3838740 - 3838765 + g 79 -12.5 -3.29511 | GTGATTTCGGGAGGA GCTGCGCGGCG GGAT TGCTGCGCGGC TTCTAGCGCGATGCG TERM 2925 3838883 - 3838909 + g 71 -10.2 -3.53012 | TAGTTCGGTGCACTT TTCGATCGCC CATTCGA GGCGGTCGAA TTTAAAGACAGCAAG TERM 2926 3839107 - 3839123 + g 78 -11.5 -3.71284 | CGTTGGTGCCGGTTA GGGCGGC AGT GTCGCCC TTGTGTTCGTCGGCG TERM 2927 3839226 - 3839242 + r 84 -13.7 -3.06183 | GGGTCCTTCGACTGC GTCGCGC TGC GCGCGAC TTCGCTCAGGATGAC TERM 2928 3839333 - 3839292 - R 100 -13.8 -4.69549 | gap 1, opp_overlap 3839328 3839329 3839330, overlap 3839293 AACCCAAAAGCAAAA TCCCCA-CCCTATCGCGCG AAATG CGCACGATAAGGATGGGGC ACCCGCTCTTCTCTC TERM 2929 3839332 - 3839293 - R 100 -17.3 -3.40102 | gap 1, opp_overlap 3839328 3839329 3839330, overlap 3839292 ACCCAAAAGCAAAAT CCCCA-CCCTATCGCGCG AAATG CGCACGATAAGGATGGGG CACCCGCTCTTCTCT TERM 2930 3839374 - 3839387 + r 74 -3.1 -4.87273 | AACATGTCTTTCATT TTGCT CATC AGCGA TTTTTCTGGGCTGTT Acid345_3242 3840488 - 3839352 - | chaperone DnaJ TERM 2931 3839945 - 3839987 + g 81 -12.6 -3.53012 | AGCCTTGCTGGAAGC GCTCCTGTCCGCGGCCAC CGCACTT GCGGCAGCTGACGGGAGC TTTGCCGGGAGCGGC TERM 2932 3840530 - 3840498 - R 91 -17.1 -2.75481 | CGTCAACTTTAACTA CCCCACCCTACGGAC TGC GTCCGTAGAATGGAG CACCCTTCGATGTTA Acid345_3243 3841088 - 3840543 - | GrpE protein Acid345_3244 3842138 - 3841095 - | heat-inducible transcription repressor HrcA TERM 2933 3841328 - 3841347 + g 70 -3.6 -4.63932 | gap 1 CCACATAGGCGGAGA GCAG-GTTT ACG AGACGCTGC TTTTCTTCAAGCGTC TERM 2934 3843200 - 3843184 - g 72 -8.7 -3.81951 | CCCGAGATGATGAAA GCCATGC AGG ACATGGC CGTGGTATTTGAAGA Acid345_3245 3842470 - 3843648 + | putative esterase TERM 2935 3844645 - 3844625 - g 72 -6.1 -4.4078 | CTTCGGCAAGCAAAA GGACGATCA CGA TTACCGTCC CTACTTCGACGCCTA TERM 2936 3845839 - 3845819 - g 72 -6.7 -4.40561 | overlap 3845816 3845820 CTCCGGCAAAAACAA CCCGGCAGG ACG CCTCCCGGT CACGTTCTACACCGG Acid345_3246 3843696 - 3846341 + | Beta-glucosidase Acid345_3247 3847925 - 3846384 - | beta-lactamase TERM 2937 3846736 - 3846746 + g 73 -3.2 -4.72272 | overlap 3846736 ATGGTTTCGTCGGCG TCGT GCT GCGA TTTTTCGTCAGCAGA TERM 2938 3847713 - 3847739 + g 83 -5.2 -5.0133 | GCCGAAGAGGGTGTT CTCGGTGA CGGGCGCGGGA TCACCGAG TTTTTTAACGCCGTA TERM 2939 3847972 - 3847991 + r 95 -15 -3.35679 | opp_overlap 3847972 GAGCGTCAAGCGAAA GGCGCAGC CGAA GCTGCGCC TTCTCAATGCGAACA TERM 2940 3847991 - 3847972 - R 95 -15 -3.75629 | opp_overlap 3847972 GAGCGTCAAGCGAAA GGCGCAGC CGAA GCTGCGCC TTCTCAATGCGAACA Acid345_3248 3848858 - 3848010 - | cobyrinic acid a,c-diamide synthase TERM 2941 3848679 - 3848699 + g 85 -11.1 -4.05033 | GTTGGGGCCGTAGAC GTCGGCGTC GAG GAGGCCGAC TTTGTGTCCCATGCG Acid345_3249 3848975 - 3850312 + | glycoside hydrolase, clan GH-D TERM 2942 3850348 - 3850322 - T 81 -14.5 -2.55267 | opp_overlap 3850322 3850343, overlap 3850326 AAATAGGGGAATGCA GAAAGCCCTCC TGAGT GGAGGGCTTCC TTGTTGGAAACGTTT TERM 2943 3850322 - 3850348 + T 83 -12.3 -3.6279 | opp_overlap 3850322 3850326, overlap 3850343 AAATAGGGGAATGCA GAAAGCCCTCC TGAGT GGAGGGCTTCC TTGTTGGAAACGTTT TERM 2944 3850344 - 3850326 - T 90 -11.7 -3.97636 | opp_overlap 3850322 3850343, overlap 3850322 AGGGGAATGCAGAAA GCCCTCC TGAGT GGAGGGC TTCCTTGTTGGAAAC Acid345_3250 3851201 - 3850461 - | Beta and gamma crystallin TERM 2945 3851555 - 3851522 - R 100 -19.7 -4.81851 | gap 1 AGTTAAAGCGAAAAA CCCCG-CCCTATCCGC TTT GCGGATAAGGACGGGG CACCCAGATCTCAAG Acid345_3251 3852633 - 3851584 - | cytochrome d ubiquinol oxidase, subunit II TERM 2946 3852094 - 3852082 - G 71 -10.5 -3.59698 | CGAGGCGACATAGAA CGCGC CAT GCGCG GTAAGCGTTACGGCG Acid345_3252 3854014 - 3852635 - | cytochrome bd ubiquinol oxidase, subunit I TERM 2947 3853447 - 3853427 - G 79 -12.5 -3.21099 | CGCGGTCATGACGAA GGCGCCGCA GAT CGCGGCACC GCACATGTTGTGGGC TERM 2948 3854125 - 3854138 + r 95 -5.3 -5.40072 | GATAACTATCGCGCT GTGAT GTGG ATCAC TTTTTTTGAAGGGGA TERM 2949 3854199 - 3854182 - R 91 -7 -5.27335 | TGCGGGAAAGAAAAA TCCCGT GGGGGG ACGGGA TGGGGTTAGCGATAG Acid345_3253 3854778 - 3854269 - | thioesterase superfamily protein Acid345_3254 3855326 - 3855634 + | hypothetical protein TERM 2950 3855640 - 3855659 + T 71 -4.8 -4.55721 | overlap 3855642 3855643 TTGCGGGTAGATCTT GCAGGGGC TAAA GCCCCCTC TTTTATGTGGCCTTT Acid345_3255 3856600 - 3855812 - | short-chain dehydrogenase/reductase SDR Acid345_3256 3856749 - 3858257 + | magnesium protoporphyrin chelatase, putative Acid345_3257 3858258 - 3859505 + | von Willebrand factor, type A TERM 2951 3859503 - 3859533 + T 78 -6.9 -4.56597 | gap 1, opp_overlap 3859509, overlap 3859509 ACGAAGACGGTGCAT TGAAGAGGACAGCC GCTC GGCTGTCCT-TCCG TTTTTCCCGAAGAAA TERM 2952 3859528 - 3859509 - T 84 -13.6 -3.08798 | opp_overlap 3859503 3859509 ACGGTGCATTGAAGA GGACAGCC GCTC GGCTGTCC TTCCGTTTTTCCCGA TERM 2953 3859509 - 3859528 + T 88 -13.6 -3.45031 | opp_overlap 3859509, overlap 3859503 ACGGTGCATTGAAGA GGACAGCC GCTC GGCTGTCC TTCCGTTTTTCCCGA Acid345_3258 3859810 - 3859550 - | Zinc finger, CDGSH-type Acid345_3259 3862033 - 3859826 - | Amylo-alpha-1,6-glucosidase TERM 2954 3860444 - 3860456 + g 76 -4.7 -4.84359 | GGGATTGGAAGAGAT GACGC GTA GCGGC TTTTTCTCGGCGTCG Acid345_3260 3863124 - 3862030 - | glycosyl transferase, group 1 Acid345_3261 3864360 - 3863236 - | hypothetical protein Acid345_3262 3865471 - 3864371 - | hypothetical protein Acid345_3263 3866586 - 3865468 - | glycosyl transferase, group 1 Acid345_3264 3867692 - 3866583 - | glycosyl transferase, group 1 TERM 2955 3866996 - 3866976 - G 79 -12.6 -3.18383 | opp_overlap 3866973 AGTGCGATCGATGAA CGCGAAGG GCGAG CCTTCGCG AAATACTTCGTCGGG Acid345_3265 3868819 - 3867701 - | NAD-dependent epimerase/dehydratase Acid345_3266 3869739 - 3868816 - | hypothetical protein TERM 2956 3869543 - 3869519 - G 70 -12.1 -2.79831 | TGAATGGCGACGACA TCCACGGCGTC AAT GACGCCATGGC CAGTGAGCAACTCGA Acid345_3267 3870702 - 3869785 - | methyltransferase type 11 TERM 2957 3870836 - 3870792 - R 70 -9.4 -3.72576 | opp_overlap 3870761 GTGCGGCTGACTAAA CTGTGCGCCGGC-CGGTGATCA GGT TGATCACCGCGACCACG-ACAG CAATTACGAGCAGCA Acid345_3268 3871507 - 3871022 - | hypothetical protein Acid345_3269 3872980 - 3871577 - | two component, sigma54 specific, Fis family transcriptional regulator Acid345_3270 3873396 - 3873073 - | hypothetical protein TERM 2958 3873228 - 3873265 + g 100 -15.5 -4.56597 | overlap 3873230 TCGCCTCCAGGTCGT CCGCGTACCGCCCACCG TTGC CGGTGAGCGGTACGAAG TTTTTCAGGAGGCCG TERM 2959 3873230 - 3873263 + g 85 -16.7 -2.60032 | overlap 3873228 GCCTCCAGGTCGTCC GCGTACCGCCCACCG TTGC CGGTGAGCGGTACGA AGTTTTTCAGGAGGC TERM 2960 3873633 - 3873650 + r 83 -12.7 -3.16564 | opp_overlap 3873633 CCAGGCCATGAAAAA GCCGCTC CGAA GAGCGGC TTGATAGAGTCCAAA TERM 2961 3873650 - 3873633 - R 100 -12.7 -4.7373 | opp_overlap 3873633 CCAGGCCATGAAAAA GCCGCTC CGAA GAGCGGC TTGATAGAGTCCAAA Acid345_3271 3875755 - 3873671 - | BNR repeat-containing glycosyl hydrolase TERM 2962 3874381 - 3874394 + g 72 -6.7 -4.4078 | TCGCGGGAATCTTAG GACCA GGCG TGGTC TTTTCCTTCACCACG TERM 2963 3875867 - 3875843 - R 100 -21.5 -5.88476 | opp_overlap 3875839 AAAACAAAGAAAAAA CCGGTGGGTGC ATA GCACCCACCGG CCAGTCTTACCGAGA Acid345_3272 3877537 - 3875888 - | hypothetical protein TERM 2964 3877670 - 3877622 - R 100 -14.5 -4.28018 | overlap 3877611 3877623 AAGACTTGAGCAAAA GTCGCTCTAACCGTGCAGCGGAA TTG TACCGCAACACGGTCTGAGCGAA AAGTAGCTTATTTTC TERM 2965 3877669 - 3877623 - R 100 -18 -3.16088 | overlap 3877611 3877622 AGACTTGAGCAAAAG TCGCTCTAACCGTGCAGCGGAA TTG TACCGCAACACGGTCTGAGCGA AAAGTAGCTTATTTT Acid345_3273 3878471 - 3877692 - | hypothetical protein TERM 2966 3878321 - 3878339 + g 76 -7.4 -4.4648 | TCGAACGTTGGCTCG CCGCAG TATCGGC CTGCGG TTTTGTCATCCCGCT Acid345_3274 3878707 - 3880110 + | two component, sigma54 specific, Fis family transcriptional regulator TERM 2967 3881481 - 3881463 - g 75 -11.7 -3.17486 | AACAAGCTGCAGGAA GTCGCGC CCGAT GCGCGAC GCCACATGGACATCA Acid345_3275 3880179 - 3882074 + | multi-sensor signal transduction histidine kinase Acid345_3276 3882111 - 3882668 + | hypothetical protein Acid345_3277 3883314 - 3882673 - | O-methyltransferase family protein TERM 2968 3883299 - 3883313 + g 73 -2.8 -4.82901 | CTTGTTTCTCTTTTT TGCG GAATAAA CGCA TTTTTCTCCGGAAAC Acid345_3278 3883439 - 3884662 + | major facilitator transporter Acid345_3279 3884729 - 3885499 + | enoyl-[acyl-carrier-protein] reductase [NADH] Acid345_3280 3885506 - 3886009 + | hypothetical protein Acid345_3281 3886445 - 3886011 - | hypothetical protein Acid345_3282 3888023 - 3886455 - | hypothetical protein Acid345_3283 3889018 - 3888020 - | TrkA-N TERM 2969 3889105 - 3889081 - R 86 -12.2 -3.90922 | gap 1, overlap 3889082 3889085 ATTGCGGGTAAATAA GGAACCCTCCC CGAA GGGAGGG-TCC TGGGGCACTACGGGG TERM 2970 3889105 - 3889082 - R 86 -14.6 -2.94232 | overlap 3889081 3889085 TTGCGGGTAAATAAG GAACCCTCCC CGAA GGGAGGGTCC TGGGGCACTACGGGG TERM 2971 3889102 - 3889085 - R 86 -12.7 -3.61652 | overlap 3889081 3889082 CGGGTAAATAAGGAA CCCTCCC CGAA GGGAGGG TCCTGGGGCACTACG Acid345_3284 3890635 - 3889124 - | amino acid transporter TERM 2972 3890525 - 3890500 - G 83 -5.3 -4.91109 | overlap 3890501 3890516 CCGTGAGCACAAAAA TGCCGGCGC CGATAATT GCGCCGACG CCCAGCATCATAAGA Acid345_3285 3892233 - 3890665 - | amino acid transporter TERM 2973 3890996 - 3891010 + g 78 -11.4 -3.66784 | opp_overlap 3890992 3890994 CATTGCACGAACAGC GACGCC GCT GGCGTC TTGTGTTCCGGATGC Acid345_3286 3892982 - 3892347 - | thiamine-phosphate pyrophosphorylase Acid345_3287 3894338 - 3892983 - | acetyl-CoA carboxylase, biotin carboxylase TERM 2974 3894063 - 3894075 + g 78 -9.1 -4.18018 | GGCCTGGCACACTTC CGCGA AGT TCGCG TTTTCGCTGAGCAGG Acid345_3288 3894860 - 3894366 - | biotin carboxyl carrier protein TERM 2975 3894904 - 3894919 + r 100 -11.8 -4.53034 | TTCTTGCCGTGCGTA CGGCGC GGAT GCGCCG TTTTACTTCTATAAC Acid345_3289 3896031 - 3894928 - | peptidase M24 TERM 2976 3896110 - 3896088 - R 100 -10.5 -5.27335 | overlap 3896089 GGCGGCAAAGAAAAA GCCCTGCGG TTTTG CCGCAGGGT GGAGAACACAACGAA TERM 2977 3896109 - 3896089 - R 95 -14 -3.75678 | overlap 3896088 GCGGCAAAGAAAAAG CCCTGCGG TTTTG CCGCAGGG TGGAGAACACAACGA Acid345_3290 3896995 - 3896141 - | hypothetical protein TERM 2978 3897205 - 3897172 - R 91 -11.7 -4.07568 | opp_overlap 3897178 CTGTTGCGGCCAAAA CGTGAAGGCGCTCGC AAGT GCGAACGCCTTGATG GATGCGGGGTCTTGG TERM 2979 3897178 - 3897199 + r 74 -11.5 -3.18264 | opp_overlap 3897172 CGGCCAAAACGTGAA GGCGCTCGC AAGT GCGAACGCC TTGATGGATGCGGGG Acid345_3291 3897997 - 3897221 - | LytR/AlgR family transcriptional regulator Acid345_3292 3899090 - 3897924 - | periplasmic sensor signal transduction histidine kinase TERM 2980 3898982 - 3898965 - GR 74 -11.3 -3.28712 | GGCGGTCTTCCAGAA CTCGGCA GTCA TGCCGAG CTTGGAGCGGACGAG Acid345_3293 3900394 - 3899237 - | FAD dependent oxidoreductase TERM 2981 3899998 - 3899972 - G 72 -9.3 -3.65812 | overlap 3899989 GTCGGTCGAACAGAA CGCGCCGCCGA GAACA TCGTCGGTGCG AAGTAGCGGATACTC Acid345_3294 3900533 - 3902077 + | hypothetical protein Acid345_3295 3904166 - 3902079 - | glycogen debranching protein GlgX TERM 2982 3902306 - 3902286 - G 74 -7.5 -4.30719 | overlap 3902288 GCCGTTTAGAATAAA GTGGAAGAC GAT GCCTTCCTC TGCCACCTCAATGCA TERM 2983 3903495 - 3903479 - G 73 -3.5 -4.73677 | opp_overlap 3903479, overlap 3903480 3903481 GCGAGAAGAAAGAAA CGGGCGC ATA GCCCCAG TAATTCACCAGCCCC TERM 2984 3904638 - 3904622 - g 74 -6.5 -4.4261 | CCTGCAAGACGAAAA GATCAGC GCG GCCGACC TGAAGCATCTGCGCG Acid345_3296 3904305 - 3904682 + | CopY family transcriptional regulator TERM 2985 3904726 - 3904763 + G 72 -9.9 -3.70076 | gap 1, opp_overlap 3904729, overlap 3904729 CGCGGCGCACGCGAT GAATGCCGGC-ATCGTCG GCT TGGCGCTCGTCGGCATTC TTTGGGTCGCTTTGC TERM 2986 3904769 - 3904781 + G 72 -9.1 -3.85698 | GTCGGCATTCTTTGG GTCGC TTT GCGAC TTTCTGGCAAGCAGA Acid345_3297 3904679 - 3905950 + | peptidase M56, BlaR1 TERM 2987 3906552 - 3906568 + G 70 -12.3 -2.7566 | opp_overlap 3906550 GAGGGCAGCAATATG CCAAGCG TGC CGCTTGG TGATTCGACTTCCCT Acid345_3298 3905994 - 3907529 + | peptidase S1C, Do TERM 2988 3907549 - 3907568 + T 100 -16.4 -5.4505 | TCCTTGTTGCATTGG GCGCGGGC TTCG GCCCGCGC TTTTTTGTTGCAAAA TERM 2989 3907636 - 3907596 - T 90 -8.2 -4.81863 | gap 2, opp_overlap 3907596, overlap 3907599 AAATGGAGAACAAAA GAAGAGCGCCGCC--GGAGC CAG GCTCCACGGCGGCGCTCAGA TGGTTGCGGGGAGAG TERM 2990 3907633 - 3907599 - T 100 -18.7 -4.49377 | gap 2, opp_overlap 3907596, overlap 3907596 TGGAGAACAAAAGAA GAGCGCCGCC--GGAGC CAG GCTCCACGGCGGCGCTC AGATGGTTGCGGGGA Acid345_3299 3908615 - 3907968 - | sugar transferase Acid345_3300 3909803 - 3908619 - | DegT/DnrJ/EryC1/StrS aminotransferase Acid345_3301 3910558 - 3909881 - | methyltransferase type 11 Acid345_3302 3911620 - 3910619 - | hypothetical protein Acid345_3303 3912512 - 3911625 - | hypothetical protein Acid345_3304 3914334 - 3912535 - | hypothetical protein Acid345_3305 3914584 - 3915819 + | glycosyl transferase, group 1 TERM 2991 3915819 - 3915796 - T 79 -13.2 -2.72463 | opp_overlap 3915796 3915793 3915800, overlap 3915800 AGCCAGTTGGAACGA CTAAGCGCAG CTAC CCGCGCTTAG TCATGTAATCGCGAA Acid345_3306 3916903 - 3915806 - | UDP-N-acetylglucosamine 2-epimerase Acid345_3307 3918106 - 3916928 - | glycosyl transferase, group 1 Acid345_3308 3919458 - 3918103 - | hypothetical protein Acid345_3309 3920996 - 3919461 - | O-antigen and teichoic acid export protein TERM 2992 3920689 - 3920675 - G 89 -2.1 -5.75342 | gap 1, overlap 3920676 3920678 CGCCCGCAAAAAAAA CCAGCG CCGT CG-TGG CTGCAGAAAGCGCGC Acid345_3310 3923313 - 3921043 - | protein-tyrosine kinase TERM 2993 3922158 - 3922177 + g 74 -7.2 -4.25606 | CTTCTTGCTGATGCT GATCGAAG TTGC CTTTGATC TTGTTTTCAGTGTTC TERM 2994 3922429 - 3922446 + g 81 -11.3 -3.79251 | overlap 3922415 3922427 ATTGCCGCTCTTAGC GAGGCGA TACT TCGCCTC TTTCATGATGCGATC Acid345_3311 3924312 - 3923338 - | polysaccharide export protein Acid345_3312 3926083 - 3924335 - | hypothetical protein Acid345_3313 3927197 - 3926085 - | DegT/DnrJ/EryC1/StrS aminotransferase TERM 2995 3927138 - 3927155 + g 70 -4 -4.63007 | GAGAACGGCTTGCAT GCGGCG ATCAAC CGACGC TTTTATCTGCTTGTA Acid345_3314 3928277 - 3927207 - | FAD dependent oxidoreductase TERM 2996 3928182 - 3928202 + g 75 -9.7 -3.87815 | opp_overlap 3928196 CGCTGACATCAATTC GTCGCGTTC AAA GAGCGTGAC TTTGTGCCCGTCGGC Acid345_3315 3928864 - 3928274 - | hexapaptide repeat-containing transferase Acid345_3316 3929933 - 3928872 - | oxidoreductase TERM 2997 3929716 - 3929738 + g 71 -7.6 -3.96892 | ACCACGTCCGCCGGA CTGTCCGCCA GCA TGGCGTCCAG TTTGTCGTAGCCCTT Acid345_3317 3932001 - 3930061 - | hypothetical protein Acid345_3318 3932988 - 3932017 - | transglutaminase-like Acid345_3319 3933957 - 3932992 - | hypothetical protein Acid345_3320 3935427 - 3933961 - | hypothetical protein TERM 2998 3935557 - 3935531 - R 70 -7.1 -4.11275 | overlap 3935532 AGAACGTAAACGAAA CGCCGCCGCGG ACCGA CCGCGCCGACT GCACCAGGTACACCG Acid345_3321 3937205 - 3935514 - | hypothetical protein Acid345_3322 3938970 - 3937228 - | hypothetical protein Acid345_3323 3939379 - 3940758 + | secretion protein HlyD Acid345_3324 3940813 - 3941580 + | ABC transporter, ATPase subunit TERM 2999 3941883 - 3941862 - f 95 -14.4 -3.72576 | opp_overlap 3941862, overlap 3941846 GCGTTTGCTACGAAA CGCCCCGG GTGCAA CCGGGGCG TTTTTCTTGGTCCAT TERM 3000 3941862 - 3941883 + F 100 -14.4 -5.14163 | opp_overlap 3941846 3941862 GCGTTTGCTACGAAA CGCCCCGG GTGCAA CCGGGGCG TTTTTCTTGGTCCAT Acid345_3325 3942122 - 3942685 + | hypothetical protein TERM 3001 3942881 - 3942870 - g 79 -7.2 -4.56597 | overlap 3942871 GCCGTCGCCCAAAAA GGCG GGAC CGCC GCGCCAACTCCCGCG Acid345_3326 3942777 - 3945161 + | carbohydrate-binding family V/XII protein Acid345_3327 3946643 - 3945165 - | metallophosphoesterase TERM 3002 3945438 - 3945450 + g 75 -10.5 -3.75153 | TGAAGCCTGGTTAAC CGCGC ACG GCGCG TTTGGCTTAAGGAAG TERM 3003 3945710 - 3945696 - G 74 -11.4 -3.53012 | TCCGCTCCTCGCAAA CGTGCG CGG CGCACG CCATGGAATCGTGAA TERM 3004 3946304 - 3946282 - G 71 -6.9 -4.10429 | opp_overlap 3946283 3946296 AACCACTCGTTAAAA CCGACTGCG GAACG CGAAGCCGG CGCTGCGTTGTCGTA Acid345_3328 3947589 - 3946837 - | haloacid dehalogenase-like hydrolase Acid345_3329 3947641 - 3948585 + | hypothetical protein Acid345_3330 3948604 - 3949698 + | hypothetical protein TERM 3005 3949832 - 3949807 - T 100 -4 -6.06723 | overlap 3949811 GGGCTTAAAAAAAAA TTCAGAGGAG AAACAA CTCCTCAAAA ATCCTTCGTGGTACT TERM 3006 3949927 - 3949982 + T 73 -8.9 -3.87815 | gap 1, opp_overlap 3949931 3949934, overlap 3949929 3949930 ACATTGCTAGAGTGC TAAATGAGGCTCAGTAGGCCC-GGGC GACAA GCCCAGGGCCCACTGAGCCGAAAGTG TTTCTGGACCTCAAA TERM 3007 3949930 - 3949979 + T 76 -12.8 -2.71422 | gap 1, opp_overlap 3949931 3949934, overlap 3949929 3949927 TTGCTAGAGTGCTAA ATGAGGCTCAGTAGGCCC-GGGC GACAA GCCCAGGGCCCACTGAGCCGAAA GTGTTTCTGGACCTC TERM 3008 3949978 - 3949931 - T 100 -18.5 -3.59262 | gap 1, opp_overlap 3949930 3949929 3949927, overlap 3949934 TGCTAGAGTGCTAAA TGAGGCTCAGTAGGCCC-GGGC GACAA GCCCAGGGCCCACTGAGCCGAA AGTGTTTCTGGACCT TERM 3009 3949975 - 3949934 - T 100 -24.6 -2.92171 | gap 1, opp_overlap 3949930 3949929 3949927, overlap 3949931 TAGAGTGCTAAATGA GGCTCAGTAGGCCC-GGGC GACAA GCCCAGGGCCCACTGAGCC GAAAGTGTTTCTGGA TERM 3010 3950088 - 3950066 - T 76 -12 -3.00946 | opp_overlap 3950087, overlap 3950063 CGGGCCCACAAAGCA GCCCACTCAT GGC AAGAGTGGGC GGGCATCGCTGTGCG TERM 3011 3950154 - 3950206 + T 100 -19.4 -5.39905 | gap 2, opp_overlap 3950169 CGGGGAACGCGGGCA CGC-GTCCGGA-CGGAAGACTTCG TATTCCC CGCAGTCTTCCGTTCCGGACAGCG TTTTTCTTATTTGCT Acid345_3331 3950761 - 3950213 - | hypothetical protein TERM 3012 3950813 - 3950773 - R 77 -11.3 -3.55071 | opp_overlap 3950778 3950779, overlap 3950779 TCATAGTTCTCCAAA GAAAAACCCATGTCTTG AAGTACG CACGACATGGGCTTTCC GATTTAAAAATTATT TERM 3013 3950807 - 3950779 - R 100 -8.9 -5.27335 | opp_overlap 3950779 3950778, overlap 3950773 TTCTCCAAAGAAAAA CCCATGTCTTG AAGTACG CACGACATGGG CTTTCCGATTTAAAA Acid345_3332 3951384 - 3950824 - | hypothetical protein Acid345_3333 3952860 - 3951418 - | amino acid transporter Acid345_3334 3955639 - 3952847 - | hypothetical protein TERM 3014 3955822 - 3955805 - H 70 -6.9 -4.07687 | opp_overlap 3955805 3955806, overlap 3955806 ATCCTCCCCTCAAAA GCCGCTC GACA GAGCGGG TTGTGGAAATCTGTT Acid345_3335 3955864 - 3957699 + | metal dependent phosphohydrolase Acid345_3336 3957769 - 3958731 + | signal recognition particle-docking protein FtsY TERM 3015 3959555 - 3959545 - g 71 -8.2 -3.9644 | overlap 3959546 TGCGGAAGAGAAGAA GCGC GCG GCGC TGGAAGAACGCGGCA Acid345_3337 3958724 - 3959923 + | 5-amino-6-(5-phosphoribosylamino)uracil reductase / diaminohydroxyphosphoribosylaminopyrimidine deaminase Acid345_3338 3960426 - 3959911 - | hypothetical protein Acid345_3339 3960968 - 3960510 - | hypothetical protein TERM 3016 3961023 - 3961003 - R 93 -11.8 -4.27316 | opp_overlap 3961000 3961003 GGTTGGAATGGAAAA GGGCCGCC GGAAA GGCGACCC TGATTTTACGCTACG Acid345_3340 3963590 - 3961029 - | DNA topoisomerase TERM 3017 3963372 - 3963404 + g 70 -2.1 -4.8622 | overlap 3963360 3963375 3963375 GTAGATGGCGTCAGC GTCTTTCGCC-AGCT TCTTC AGCTTGGCGACA-AC TTTTTCCTTGCCCGG Acid345_3341 3964857 - 3963700 - | DNA processing protein DprA, putative TERM 3018 3963906 - 3963948 + g 71 -12 -2.87211 | opp_overlap 3963907, overlap 3963910 3963937 GCTGGTCGAATAGAG ATGCTGCCTGGGGCGTTT CGGTCGC AAGCGCCTCAGGCGGCGG TATCTGCAAACGGAT Acid345_3342 3964903 - 3965739 + | hypothetical protein Acid345_3343 3965821 - 3966465 + | membrane protein TERM 3019 3966494 - 3966473 - T 100 -15.1 -3.89215 | opp_overlap 3966467 CTGCATAAAGCGAAA CGGCGACGC CTTC GCGCCGCCG TCGCAATGCTTCCAA Acid345_3344 3967585 - 3966515 - | von Willebrand factor, type A Acid345_3345 3968693 - 3967692 - | ribosomal large subunit pseudouridine synthase D TERM 3020 3967835 - 3967859 + g 88 -14.3 -3.55801 | GGAAATTTCGCTCCA GGGACGCCATC TTC GATGGCATCCC TTTCAACGCCTTCGT Acid345_3346 3969273 - 3968713 - | membrane-bound metal-dependent hydrolase Acid345_3347 3969584 - 3969276 - | Rieske (2Fe-2S) oxidoreductase Acid345_3348 3970445 - 3969588 - | dimethyladenosine transferase Acid345_3349 3970597 - 3972051 + | glycogen/starch synthases, ADP-glucose type Acid345_3350 3972096 - 3974582 + | ABC efflux pump, inner membrane subunit Acid345_3351 3976362 - 3974905 - | amino acid transporter Acid345_3352 3977758 - 3976319 - | SSS family solute/sodium (Na+) symporter TERM 3021 3977870 - 3977909 + H 71 -5.8 -4.28548 | gap 1, opp_overlap 3977892 AGTGGATTGCGACCA TTATTC-ACGCTTCCGGCA AAA TGCGCGAGGCGTGGGATAA TTTTCGTCAATGAGT Acid345_3353 3977919 - 3978821 + | ATPase, BadF/BadG/BcrA/BcrD type Acid345_3354 3978865 - 3979518 + | phage SPO1 DNA polymerase-related protein Acid345_3355 3979519 - 3979938 + | hypothetical protein Acid345_3356 3981397 - 3979943 - | two component, sigma54 specific, Fis family transcriptional regulator Acid345_3357 3984302 - 3981390 - | multi-sensor signal transduction histidine kinase TERM 3022 3984026 - 3984048 + g 71 -6.8 -4.14392 | overlap 3984027 TGATACCGGCCTTCT CGCCGGGGCC GTC GGCCTCGACC TTTTCGGCCTTGAGA TERM 3023 3984569 - 3984543 - H 93 -10.9 -4.43844 | CCAGCAGCCAGAAAA TCAGCTTCCAG TCGAT CAGGAAGCTGA CCAGCATGCGGTACC TERM 3024 3984623 - 3984656 + H 89 -13.8 -3.61517 | overlap 3984628 ACCACCTTTCAACGT GAGATCGCCCGGTG ATTCCG CACCGGGCGTTCGC TTCTTACGGCAAAGT TERM 3025 3984628 - 3984651 + H 95 -15.3 -3.28745 | overlap 3984623 CTTTCAACGTGAGAT CGCCCGGTG ATTCCG CACCGGGCG TTCGCTTCTTACGGC Acid345_3358 3984825 - 3985433 + | NADH-quinone oxidoreductase, B subunit TERM 3026 3985451 - 3985474 + F 95 -12.4 -4.51777 | ATAAAGTTTTCAAGC GGGGCATGGC TTCG GTCGTGCCCC TTTTCGTTGTCGTAT Acid345_3359 3985513 - 3986328 + | hypothetical protein TERM 3027 3986336 - 3986384 + T 72 -2.4 -4.93877 | gap 1, opp_overlap 3986351, overlap 3986351 TGCTCTGAAGAAATC GCGCGCAAAAGAAAATGCCCGGA TCGC TCCGGGCATTTG-TGTTGCAAGG TTTTGTTTAGTGAGG TERM 3028 3986351 - 3986370 + T 100 -13.6 -4.19177 | opp_overlap 3986351, overlap 3986336 GCGCGCAAAAGAAAA TGCCCGGA TCGC TCCGGGCA TTTGTGTTGCAAGGT TERM 3029 3986370 - 3986351 - T 100 -13.6 -5.07652 | opp_overlap 3986336 3986351 GCGCGCAAAAGAAAA TGCCCGGA TCGC TCCGGGCA TTTGTGTTGCAAGGT Acid345_3360 3987770 - 3986391 - | hypothetical protein TERM 3030 3986510 - 3986545 + g 88 -16 -3.02144 | GTCCCCCGCTCGCGT GCTGTGCGCCGCCGGC ATGC GCAGGCTGCGCACCGC TCTTCGCGCCAGTGC TERM 3031 3987425 - 3987447 + g 71 -10 -3.53444 | opp_overlap 3987416 AGTACACCACGCCGT GATCAACATT AAT GATGTTGATC TTTCCGCCGGAATCG Acid345_3361 3988303 - 3988713 + | hypothetical protein Acid345_3362 3988710 - 3989978 + | N-glycosyltransferase PgaC Acid345_3363 3989975 - 3991585 + | hypothetical protein TERM 3032 3991786 - 3991776 - g 77 -8.2 -4.3208 | TGCCACAAGCCAAAA CCGC GCC GCGG CAGGAAAGCTCGAAA TERM 3033 3992727 - 3992706 - g 70 -2.1 -4.83169 | gap 1, opp_overlap 3992707 3992707, overlap 3992692 3992707 3992708 ACGCGCCGACAAAAA GCCTGCG-CC GAT GGTCGCTGCC GCGCGCAAGGTTGAT TERM 3034 3992848 - 3992836 - g 77 -2.6 -5.08601 | overlap 3992837 GCATCCCAAGAAAAA GCGA TGGGG CCGC CGATCGTCGTGACAC Acid345_3364 3991675 - 3993531 + | multicopper oxidase, type 3 Acid345_3365 3994335 - 3993541 - | Alpha/beta hydrolase TERM 3035 3993824 - 3993866 + g 71 -10.5 -3.53343 | GTTTCCATCAGCATG GCGCGCGCGGCATTGGC GATGTCGGG GCGATTGCTGCGCGTGC TTTGACCGAGAAGTT Acid345_3366 3994825 - 3994439 - | hypothetical protein Acid345_3367 3995410 - 3994961 - | ferric uptake regulator family protein TERM 3036 3995249 - 3995260 + g 90 -4.4 -5.4505 | AACCGTGGTGAAGCC GATG CCCG CATC TTTTTTCTTCACCAG Acid345_3368 3997008 - 3995518 - | WD-40-like beta propeller repeat-containing protein TERM 3037 3996923 - 3996937 + g 75 -5.6 -4.56597 | opp_overlap 3996923 AGGGAGGCCTGGAAA GCATCG TCG CGAAGC TTTTTGAGCGAGGCG Acid345_3369 3998415 - 3997048 - | serine/threonine protein kinase TERM 3038 4000065 - 4000089 + G 73 -12.1 -3.06133 | opp_overlap 4000078, overlap 4000079 GTGGACCGGCTACAT CCCGTTCGACA AAC TGCCGAGCGGG TTCGATCCGCCGTTA Acid345_3370 3998512 - 4000980 + | penicillin amidase TERM 3039 4001022 - 4000995 - T 81 -12 -3.60296 | opp_overlap 4001000 4001019, overlap 4001000 GACTTTCAGGGCAAA CGAAAGGACGGC CGCA GCCGCCCTTTTG TGGAACTCAAATACT TERM 3040 4001017 - 4001000 - T 83 -10.5 -4.07246 | opp_overlap 4001000, overlap 4000995 TCAGGGCAAACGAAA GGACGGC CGCA GCCGCCC TTTTGTGGAACTCAA TERM 3041 4001000 - 4001017 + T 83 -8.3 -4.38712 | opp_overlap 4000995 4001000 TCAGGGCAAACGAAA GGACGGC CGCA GCCGCCC TTTTGTGGAACTCAA Acid345_3371 4002204 - 4001038 - | hypothetical protein TERM 3042 4001789 - 4001815 + g 71 -7.2 -4.11484 | opp_overlap 4001784, overlap 4001783 AACGTCAACACCGCC CCCGGAGGGG TCGGATT CGCTTCCGGG TTTTGCGGAATTGGA Acid345_3372 4002690 - 4002229 - | hypothetical protein TERM 3043 4002489 - 4002513 + gr 100 -17.3 -3.28791 | opp_overlap 4002494 4002498 CGCGGCGAACGCCGA TCCAACGGACA TCG TGTCCGTTGGA TTCTACCGAGGCGCT Acid345_3373 4002925 - 4002662 - | hypothetical protein Acid345_3374 4003661 - 4003128 - | hypothetical protein Acid345_3375 4004366 - 4004028 - | hypothetical protein Acid345_3376 4004812 - 4004405 - | hypothetical protein Acid345_3377 4005639 - 4004809 - | chromosomal replication initiator, DnaA-like Acid345_3378 4005857 - 4005636 - | hypothetical protein TERM 3044 4005909 - 4005890 - R 73 -10.6 -3.37464 | overlap 4005882 GCACGAAGCCGAGAA CGCCGCCG CCCA CGGTGGCG ATGGCTGATGCTTTC Acid345_3379 4006368 - 4006060 - | hypothetical protein Acid345_3380 4006549 - 4006361 - | hypothetical protein Acid345_3381 4006839 - 4006543 - | hypothetical protein TERM 3045 4006578 - 4006588 + g 77 -8.2 -4.33165 | overlap 4006577 CTGGTGGTAGGCTTT CGCG ATG CGCG TTTTGCTCAATTTCG Acid345_3382 4007257 - 4006832 - | hypothetical protein Acid345_3383 4007561 - 4007268 - | hypothetical protein Acid345_3384 4008439 - 4007750 - | hypothetical protein Acid345_3385 4008994 - 4008449 - | hypothetical protein TERM 3046 4008620 - 4008644 + g 80 -10 -3.95324 | gap 1, overlap 4008618 CCAGCCGGAGATCTT CGCGGCGCGGA TGAG TTCG-GCCGCG TTCTTCTTCAGCGTG Acid345_3386 4009315 - 4009004 - | hypothetical protein Acid345_3387 4009728 - 4009312 - | hypothetical protein Acid345_3388 4010961 - 4009963 - | hypothetical protein Acid345_3389 4013034 - 4010965 - | integrase catalytic subunit TERM 3047 4013097 - 4013081 - R 85 -2.1 -5.47218 | overlap 4013082 CGGCAGGGAAAAAAA CGCGGGC ATC GCTCACA GTGCCCTCCCTGACA Acid345_3390 4013584 - 4013093 - | hypothetical protein Acid345_3391 4013890 - 4014633 + | putative prophage repressor TERM 3048 4014889 - 4014910 + G 77 -2.2 -5.03314 | ACAAGACGCGCGAAA TCTGCTAC GAACCG GTCGCGGA TTTTTTCAAGGTGAA Acid345_3392 4014645 - 4015268 + | hypothetical protein TERM 3049 4015989 - 4015979 - g 74 -2.4 -4.9218 | overlap 4015980 4015981 GATCGAGCACAAAAA GGCG CTT CGCT TCGAACCGTTCAGCG Acid345_3393 4015290 - 4016183 + | hypothetical protein Acid345_3394 4016183 - 4016917 + | hypothetical protein TERM 3050 4019246 - 4019271 + G 85 -10.4 -4.2679 | overlap 4019244 4019264 TCGGCGGCGGGTGGC GGCAGCGTGG GGACTG CTGCGCTGCC TTTTGGTAACGCTTA Acid345_3395 4016978 - 4020019 + | hypothetical protein Acid345_3396 4020066 - 4020857 + | D12 class N6 adenine-specific DNA methyltransferase TERM 3051 4020911 - 4020870 - f 100 -15.8 -4.07885 | opp_overlap 4020875 4020876 TAGCCGGGGCGAAAA GCCAACGGGGCAGAGGGC GGGCCG GCCCCCAGCCCCATTTGC TAATTAGCTACTACC TERM 3052 4020875 - 4020906 + F 71 -8.5 -3.84961 | opp_overlap 4020870, overlap 4020876 GGGGCGAAAAGCCAA CGGGGCAGAGGGC GGGCCG GCCCCCAGCCCCA TTTGCTAATTAGCTA TERM 3053 4020876 - 4020905 + F 75 -12 -2.90494 | opp_overlap 4020870, overlap 4020875 GGGCGAAAAGCCAAC GGGGCAGAGGGC GGGCCG GCCCCCAGCCCC ATTTGCTAATTAGCT Acid345_3397 4021732 - 4022973 + | hypothetical protein Acid345_3398 4022951 - 4023292 + | hypothetical protein Acid345_3399 4023289 - 4023942 + | hypothetical protein TERM 3054 4023996 - 4023982 - f 76 -12.8 -2.74605 | opp_overlap 4023982, overlap 4023978 4023979 CGCTCCTAAAACGCA CCGCCC TCC GGGCGG TTTTCTTGTGCTCAA TERM 3055 4023982 - 4023996 + F 100 -12.8 -4.81212 | opp_overlap 4023978 4023979 4023982 CGCTCCTAAAACGCA CCGCCC TCC GGGCGG TTTTCTTGTGCTCAA TERM 3056 4024031 - 4024019 - f 74 -2.6 -5.07652 | GTGCTCAAAAGAAAA CCAG ACAAA CCGG ACAAAGCGGACGCGT Acid345_3400 4024182 - 4024655 + | mannosyl-glycoprotein endo-beta-N-acetylglucosamidase Acid345_3401 4024652 - 4025299 + | hypothetical protein Acid345_3402 4025664 - 4026014 + | hypothetical protein Acid345_3403 4026014 - 4026436 + | hypothetical protein Acid345_3404 4026433 - 4026753 + | hypothetical protein TERM 3057 4027083 - 4027038 - g 79 -5.3 -4.81249 | gap 1, opp_overlap 4027039, overlap 4027039 GCCGAAACGGAAAAA GCGCG-TGAGTTCGCGAGTGCG TTT CGTGATCGCGAATTCAGCGGGC TCGATGAAGCGGTGA Acid345_3405 4026753 - 4027373 + | hypothetical protein Acid345_3406 4027354 - 4028802 + | hypothetical protein TERM 3058 4028904 - 4028883 - g 86 -6.5 -4.87892 | gap 1, opp_overlap 4028882, overlap 4028885 GCCGAAGAAAAGAAA GC-GGCCGAG GCG CTGGGCCCGC AATTGTTCCAGCTTG Acid345_3407 4028799 - 4030310 + | hypothetical protein Acid345_3408 4030307 - 4031203 + | hypothetical protein Acid345_3409 4031222 - 4031614 + | hypothetical protein TERM 3059 4032539 - 4032516 - g 72 -5.3 -4.42619 | gap 2 GAAGAGTGTACAAAA CGG-CAG-GGC GCGA GCCGCTGGCCG ACAAAAAGGAGAAGC Acid345_3410 4031695 - 4033500 + | hypothetical protein Acid345_3411 4033497 - 4034033 + | hypothetical protein TERM 3060 4034080 - 4034051 - f 100 -16.5 -4.3586 | GCACTGAGATGAAAA GGCCAGGCTCC GTGAGAGG GGAGCCTGGCC TGTAAGCGAAGAAGC Acid345_3412 4034160 - 4034540 + | hypothetical protein Acid345_3413 4034559 - 4035266 + | hypothetical protein Acid345_3414 4035326 - 4035769 + | hypothetical protein Acid345_3415 4035766 - 4036224 + | hypothetical protein Acid345_3416 4036233 - 4036475 + | hypothetical protein TERM 3061 4037251 - 4037265 + G 70 -4.3 -4.56597 | GCGACGGCGGCGGAC GATGT GTTCA ACATC TTTTTGGCGGACACG Acid345_3417 4036495 - 4037499 + | hypothetical protein TERM 3062 4037611 - 4037629 + F 70 -6.6 -4.07687 | TGGGATCTGTTTCAC CGGGGCAA CCT TCGCTCCG TTTTCGGCGCACGCT Acid345_3418 4037722 - 4038474 + | hypothetical protein Acid345_3419 4038471 - 4038875 + | hypothetical protein TERM 3063 4039401 - 4039376 - g 85 -2.4 -5.63236 | overlap 4039390 ATTGAAAAACAAAAA GAGGCGCTCG AAAAGG CACGCGACTC GGGTGACACAGGGAT Acid345_3420 4038875 - 4041526 + | hypothetical protein TERM 3064 4041780 - 4041802 + G 93 -13.4 -3.91897 | overlap 4041778 TCATGGATTTTGAGC GCGGCCGC GCTTATA GCGGCCGC TTTCTCGATAAGCCG Acid345_3421 4041527 - 4042360 + | hypothetical protein TERM 3065 4042868 - 4042836 - g 75 -10.5 -3.65046 | opp_overlap 4042837 TTCCTATGCCAACAA CTGCAGCCTGCGCTT TAA AAGCGAACGCTGCGG ATCCACCTCGACGAA Acid345_3422 4042360 - 4043037 + | hypothetical protein Acid345_3423 4043037 - 4045502 + | hypothetical protein TERM 3066 4045547 - 4045582 + T 79 -2.7 -5.15634 | GAGCGGCCAGGAAAA CAGGAATTACGTG CGAGTACTAT CATTTAATTCCTG TTTTTTACTCGCATC Acid345_3424 4045930 - 4045634 - | XRE family plasmid maintenance system antidote protein Acid345_3425 4046257 - 4045940 - | plasmid maintenance system killer TERM 3067 4046250 - 4046230 - G 81 -12.7 -3.56092 | CGATCACTCGGCAAA TAGTAACGC GAT GCGTTACTA CCGTCAATCGCCGAA Acid345_3426 4046294 - 4048147 + | bifunctional homocysteine S-methyltransferase/5,10-methylenetetrahydrofolate reductase protein Acid345_3427 4048239 - 4048469 + | exodeoxyribonuclease VII small subunit TERM 3068 4048504 - 4048519 + F 76 -11.8 -3.03124 | opp_overlap 4048496 ATCACAACCCTAAGC CCGGCC TCGA GGCCGG TGTTGACGAATCAGG TERM 3069 4048932 - 4048965 + G 91 -17.5 -3.05384 | opp_overlap 4048937 4048938, overlap 4048939 AAAGCGCTTCACCCC GGAAACGGCCCTGCC CGAC GGCAGGGCTTTTTCC TTGGCTGGAAGCAAA TERM 3070 4048939 - 4048958 + G 100 -15 -4.88407 | opp_overlap 4048938 4048937, overlap 4048932 TTCACCCCGGAAACG GCCCTGCC CGAC GGCAGGGC TTTTTCCTTGGCTGG Acid345_3428 4048791 - 4049471 + | DGPFAETKE domain-containing protein TERM 3071 4049481 - 4049458 - T 74 -2.3 -5.05782 | overlap 4049444 4049459 4049460 4049462 AGCGACGGCAAAAAA CCGACGCGC GATGAG GCACGTCTA GGCCGCGAGGAATTG ligC 4050603 - 4049479 - | ATP-dependent DNA ligase TERM 3072 4049929 - 4049961 + g 88 -14.1 -3.53012 | GATCTTGCGCATGGC GCGCTCGCCCGATTG ATA CGGTTGGTCGAGCGC TTTCGCCACCACGCC TERM 3073 4051211 - 4051197 - g 73 -3.5 -4.73677 | gap 1, opp_overlap 4051209 4051210, overlap 4051193 4051198 4051199 GCTACAAGAAAGAAA CTGCCG GTTC CGGC-G CCGCCGGCGATTTGC Acid345_3430 4050665 - 4051744 + | oxidoreductase Acid345_3431 4052130 - 4051768 - | ankyrin Acid345_3432 4052142 - 4053089 + | farnesyl-diphosphate synthase TERM 3074 4053100 - 4053157 + F 76 -12.7 -2.78463 | opp_overlap 4053100 4053102, overlap 4053102 4053106 AGTAAGGGAACCACA GAGGCACATAGAGCTCAGAGGTTTTAG AATT CTTTGCCCTCTGTGTTCTCTGTGCCTC TGTGGTGAGAAAGAT Acid345_3433 4053175 - 4053930 + | LmbE-like protein Acid345_3434 4054047 - 4054835 + | hypothetical protein TERM 3075 4054887 - 4054854 - g 70 -2.4 -4.74706 | gap 1 GCGAATATCGAAAAA CCTCACTCGCACCGA TGCTC TCGGTACGC-CAAGG CAAACAGGCTCTGGA Acid345_3435 4054835 - 4055227 + | glyoxalase/bleomycin resistance protein/dioxygenase Acid345_3436 4055856 - 4055224 - | O-methyltransferase family protein Acid345_3437 4056558 - 4055857 - | beta-lactamase-like Acid345_3438 4056940 - 4056569 - | rhodanese/sulfurtransferase-like protein Acid345_3439 4057118 - 4058872 + | serine phosphatase TERM 3076 4059362 - 4059324 - g 70 -3.7 -4.58685 | gap 1, overlap 4059312 4059325 4059326 AAAGCTGCGGAAAAA GCCGCG-CATCGCGTTCC GCGT GAATCCCGACGTCCCGGC AGAAACGCATCCGTA TERM 3077 4060114 - 4060102 - g 71 -7.7 -4.08216 | overlap 4060090 GGATCGCGCGCAAAA GTCGT GCG ACGAC GTGAAACCATCAAGG Acid345_3440 4058869 - 4060152 + | diaminopimelate decarboxylase Acid345_3441 4061435 - 4060440 - | hypothetical protein Acid345_3442 4062326 - 4061439 - | protein of unknown function LppY and LpqO TERM 3078 4061856 - 4061887 + g 71 -7.1 -4.25104 | CCCGTCTGGTTTTGC CGCGGGAGTCGCC CCAGTT GGCGGCGTCGGCG TTTTCGTCAGCGCAA Acid345_3443 4064059 - 4062389 - | amidohydrolase 3 Acid345_3444 4064360 - 4064905 + | BioY protein Acid345_3445 4064944 - 4065819 + | hypothetical protein TERM 3079 4065858 - 4065841 - T 95 -14.1 -3.75153 | opp_overlap 4065841 TCCGCGCAAGCGAAA GGCCGGC GCAA GCCGGCC TTCTTCATTCTCCGC TERM 3080 4065841 - 4065858 + T 100 -14.1 -3.8591 | opp_overlap 4065841 TCCGCGCAAGCGAAA GGCCGGC GCAA GCCGGCC TTCTTCATTCTCCGC Acid345_3446 4066222 - 4065887 - | type IV pilus assembly PilZ Acid345_3447 4067955 - 4066231 - | Zn-dependent hydrolase TERM 3081 4067825 - 4067850 + g 70 -11.8 -2.85008 | overlap 4067824 4067837 GCTTTGAGCCGTGCG CCGTTCGGCG CCGATC CGCCGATCGG ATATTTCTTGTGGAC Acid345_3448 4068106 - 4068660 + | ECF subfamily RNA polymerase sigma-24 factor Acid345_3449 4068671 - 4069015 + | hypothetical protein TERM 3082 4069053 - 4069033 - T 100 -14 -4.54727 | opp_overlap 4069026 CGTCGCAAAGGAAAA GGCCTCCC GCTCG GGGAGGCC TTCGCACGTCTTGAA Acid345_3450 4070292 - 4069072 - | penicillin-binding protein, transpeptidase TERM 3083 4069453 - 4069429 - G 82 -14.3 -2.88544 | opp_overlap 4069428 4069423 CTTGATGTCGAGATA GCGCTTCACGC GCG GCGTGAAGCTC GTCACTTCCTGCGCC TERM 3084 4070080 - 4070098 + g 71 -10.2 -3.48474 | opp_overlap 4070062, overlap 4070071 4070082 CTCGTAGTAGCGGCG GCGCGCGA CTT TCGCGCTC TTACTTCTGCCTTTG TERM 3085 4070082 - 4070096 + g 71 -11.4 -3.30441 | opp_overlap 4070062, overlap 4070071 4070080 CGTAGTAGCGGCGGC GCGCGA CTT TCGCGC TCTTACTTCTGCCTT TERM 3086 4070486 - 4070475 - R 100 -7.2 -5.38249 | ACCAAGCACAAAAAA CGGC GCTT GCCG GAGACCCCGAATCGC TERM 3087 4070710 - 4070691 - R 100 -15 -4.7219 | opp_overlap 4070690 4070687 GAGACTAATACAAAA GGCGCGAC CGAG GTCGCGCC CTGATTGCTGTCGTA Acid345_3451 4072007 - 4070733 - | cell division protein FtsZ Acid345_3452 4073309 - 4072068 - | cell division protein FtsA TERM 3088 4073137 - 4073147 + g 72 -4.6 -4.59773 | ACAGCTTTCTGGATG GCCG CGG TGGC TTTTTCGAGATCGAC Acid345_3453 4074361 - 4073318 - | cell division septal protein-like TERM 3089 4074505 - 4074524 + r 84 -13.6 -3.14294 | opp_overlap 4074505 ATGCAAAAAGAAAAA GGACGCTC ATGA GAGCGTCC TTCGGTCTAGATGTT TERM 3090 4074524 - 4074505 - R 100 -13.6 -5.63236 | opp_overlap 4074505 ATGCAAAAAGAAAAA GGACGCTC ATGA GAGCGTCC TTCGGTCTAGATGTT Acid345_3454 4075240 - 4074545 - | hypothetical protein Acid345_3455 4075470 - 4076183 + | Crp/FNR family transcriptional regulator TERM 3091 4076221 - 4076236 + F 100 -10.4 -5.07652 | overlap 4076227 TAAGAAGAACCCCAA CCTCGC GGAA GCGAGG TTTTCTTTTGCAAAA TERM 3092 4076275 - 4076258 - f 95 -10.5 -4.67038 | TTTGCAAAACGAAAA GACCGCC CGCA GGCGGCC TCTCGGTAACAAAAC Acid345_3456 4076696 - 4077208 + | hypothetical protein Acid345_3457 4078137 - 4077205 - | MarR family transcriptional regulator Acid345_3458 4078146 - 4078742 + | hypothetical protein Acid345_3459 4081192 - 4078739 - | ABC efflux pump, inner membrane subunit TERM 3093 4080983 - 4080959 - G 85 -10 -4.3255 | opp_overlap 4080977, overlap 4080974 4080977 CTGCCAATCAACAAA GTTCGGGTAC GAAAT GGACCCGAAC GCGAAGTTCGGCTTC TERM 3094 4081094 - 4081076 - G 80 -9.5 -4.21194 | overlap 4081079 GTTCACCACGGAAAA CAGCGCG GTGTT CGCGCCG ATGCCCAGCGCCAGC Acid345_3460 4082580 - 4081315 - | major facilitator transporter Acid345_3461 4085434 - 4082675 - | ABC efflux pump, inner membrane subunit TERM 3095 4083358 - 4083348 - G 71 -6.8 -4.21936 | overlap 4083349 CCGACAATCTCAAAA TCGG CCA CCGA TGCCGCACTGCCGCC TERM 3096 4084085 - 4084055 - G 81 -13.2 -3.53012 | CTGCGCGCCGGGAAA CGCCAGCACCAGCA ACA TGCGCGTGCCGGCG TACGCAACCAGCAGT Acid345_3462 4085799 - 4085434 - | PadR family transcriptional regulator Acid345_3463 4085936 - 4086307 + | ArsR family transcriptional regulator Acid345_3464 4086309 - 4086701 + | glyoxalase/bleomycin resistance protein/dioxygenase Acid345_3465 4086716 - 4087252 + | hypothetical protein Acid345_3466 4087249 - 4087503 + | hypothetical protein Acid345_3467 4087481 - 4087882 + | hypothetical protein Acid345_3468 4088071 - 4090602 + | Hep_Hag TERM 3097 4090617 - 4090649 + F 100 -12.7 -4.41895 | opp_overlap 4090605 4090604, overlap 4090618 4090619 AATGCAACCGTAGTT GCCCCACTCTATCGC AAA GCGATAGGGTGGGAA TTTTCCTTCCGCATT TERM 3098 4090618 - 4090648 + F 100 -16.2 -3.24414 | opp_overlap 4090604, overlap 4090617 4090619 ATGCAACCGTAGTTG CCCCACTCTATCGC AAA GCGATAGGGTGGGA ATTTTCCTTCCGCAT TERM 3099 4090619 - 4090647 + F 100 -19.7 -2.54166 | overlap 4090618 4090617 TGCAACCGTAGTTGC CCCACTCTATCGC AAA GCGATAGGGTGGG AATTTTCCTTCCGCA TERM 3100 4092988 - 4092973 - g 79 -6.8 -4.63486 | ACTCCGCGAACAAAA GGCCCT GATC AAGGCC CTTAACGCGCGCCTG Acid345_3469 4090697 - 4093030 + | Hep_Hag Acid345_3470 4094318 - 4092990 - | putative thiol-disulfide isomerase or thioredoxin TERM 3101 4094119 - 4094100 - G 71 -11.4 -3.29511 | gap 1 GGGATCGTTGGAGAA CCG-CCCGC AGC GCGGGTCGG CGAACCAGGGCGGCA Acid345_3471 4097217 - 4094536 - | ABC efflux pump, inner membrane subunit Acid345_3472 4097589 - 4097227 - | PadR family transcriptional regulator Acid345_3473 4098355 - 4098570 + | hypothetical protein Acid345_3474 4099525 - 4098590 - | Toll-interleukin receptor Acid345_3475 4100463 - 4099543 - | hypothetical protein Acid345_3476 4101559 - 4100531 - | HNH endonuclease TERM 3102 4100557 - 4100571 + g 71 -7 -4.13767 | overlap 4100558 4100566 GTCGCTTCTTATCGC TGCCGC CTC GCGGCC TTTTACGGTCGGCCG TERM 3103 4101716 - 4101766 + r 100 -13.4 -4.3255 | overlap 4101717 4101718 ACTTTCAACCTCTGG GTGCCCCATTCTAGGGATTCAC TGCCTTT GTGAATCGCTAGGGTGGGGCGG TTTGTTGGTTGGACG TERM 3104 4101717 - 4101765 + r 100 -16.9 -3.19048 | overlap 4101716 4101718 CTTTCAACCTCTGGG TGCCCCATTCTAGGGATTCAC TGCCTTT GTGAATCGCTAGGGTGGGGCG GTTTGTTGGTTGGAC TERM 3105 4101718 - 4101764 + r 95 -18.2 -2.50947 | overlap 4101717 4101716 TTTCAACCTCTGGGT GCCCCATTCTAGGGATTCAC TGCCTTT GTGAATCGCTAGGGTGGGGC GGTTTGTTGGTTGGA TERM 3106 4101856 - 4101804 - R 100 -23.1 -3.65902 | opp_overlap 4101819, overlap 4101850 TCGACCTGACCGAAA TGCCCCACCCTAAGATTTCGCTC AACAGCG AAGCGAAATCTTAGAATGGGGCA CCCCTAAAATGGACA Acid345_3477 4102482 - 4101916 - | hypothetical protein TERM 3107 4102645 - 4102591 - H 100 -24.6 -3.08966 | overlap 4102638 GTAAACGCGATCGAA CTGCCCCACCCTAAGCTTTCGCTC AAAACCG GAGCGAAAGCTTAGAATGGGGCAC CCAGAGGTTTACATG Acid345_3478 4102750 - 4103241 + | hypothetical protein TERM 3108 4103460 - 4103448 - T 74 -3.4 -4.89339 | opp_overlap 4103448 AAGCACTTAGAAAAA GTTG TTTAC CAAC TTCTAACTTCGGGTT TERM 3109 4103608 - 4103587 - T 77 -7.3 -4.3586 | CGAGGTAGATCAAAA CAGTTAAGC AGTT GCTGAACTG TGGGACTGGAATTCT Acid345_3479 4105197 - 4103590 - | ABC transporter, ATPase subunit TERM 3110 4104146 - 4104164 + g 76 -3 -5.00884 | overlap 4104148 GTTTTGCCGAGACCG TTGCGTCC CAT GAGCGCGA TTTTTTCGCCGCGCT Acid345_3480 4105366 - 4106271 + | diguanylate cyclase with PAS/PAC sensor Acid345_3481 4106281 - 4107186 + | chemotaxis protein Acid345_3482 4107196 - 4107990 + | OmpA/MotB family outer membrane protein TERM 3111 4108039 - 4108053 + F 72 -11.4 -3.06183 | GGGTCCTTCGACTTC GCACGC TTC GCGTGC TTCGCTCAGGATGAC Acid345_3483 4108115 - 4109911 + | peptidase M28 Acid345_3484 4109920 - 4111023 + | WD-40-like beta propeller repeat-containing protein Acid345_3485 4111929 - 4111024 - | type IV pilus assembly PilZ TERM 3112 4112235 - 4112259 + G 70 -2.7 -4.77986 | GGTTGCGGCCGTTGA GATCGCCAAAG GTG CGCTCGCGATC TTTTTCAGTGTTTGG Acid345_3486 4112146 - 4112676 + | membrane protein Acid345_3487 4113434 - 4112673 - | LytR/AlgR family transcriptional regulator Acid345_3488 4114504 - 4113431 - | periplasmic sensor signal transduction histidine kinase TERM 3113 4113791 - 4113801 + g 74 -2.4 -5.00616 | CATTTGCAGGCGTGC GCCG AAC CGGA TTTTTTCGACCGCGA Acid345_3489 4115214 - 4114510 - | putative transmembrane protein Acid345_3490 4117075 - 4115594 - | hypothetical protein TERM 3114 4117059 - 4117045 - G 83 -5.6 -4.99645 | overlap 4117050 AGGTTAGAAATAAAA GGACAC AGA GGGTCC GAACGAATCCCCACA Acid345_3491 4118561 - 4117281 - | Pro-Hyp dipeptidase TERM 3115 4117834 - 4117823 - G 75 -3.6 -4.79826 | overlap 4117816 AGACATGAGCAAAAA CCGG TTTG CCAG CGCGGTGGGCCTCAG TERM 3116 4118099 - 4118133 + g 93 -12.3 -4.26903 | gap 1 TGGGGCCGGTAACCT CACCACTCTCTATGCG ACGG CGAAT-GAGAGTGGTG TTTTGCTGGACTGAC Acid345_3492 4119831 - 4118638 - | Beta-ketoadipyl CoA thiolase TERM 3117 4119889 - 4119866 - H 72 -3.9 -4.71426 | opp_overlap 4119867, overlap 4119867 CGGTCACGAAGAAAA CCGTTTTTG TCGCGC CAAAAACGT TTTAAATCAGGTATT TERM 3118 4119867 - 4119888 + H 74 -7.4 -4.19258 | opp_overlap 4119867 4119866 GGTCACGAAGAAAAC CGTTTTTG TCGCGC CAAAAACG TTTTAAATCAGGTAT TERM 3119 4121927 - 4121917 - g 77 -2.4 -5.09895 | opp_overlap 4121917, overlap 4121918 GACGCAGGCAAAAAA GCGC AGG GCGA ATTGCTCGTCGCGAT Acid345_3493 4119937 - 4121988 + | Beta-N-acetylhexosaminidase Acid345_3494 4122055 - 4122336 + | hypothetical protein Acid345_3495 4122496 - 4123605 + | NAD-dependent epimerase/dehydratase TERM 3120 4124568 - 4124552 - g 85 -10.9 -3.99494 | GGAACTCAACAAGAA CTGTCGT ATG ACGACAG AGCGAATCACCGAGC Acid345_3496 4123602 - 4124915 + | radical SAM family Fe-S protein TERM 3121 4125781 - 4125806 + G 73 -12.5 -2.74792 | opp_overlap 4125796, overlap 4125780 TGTGTCGGCTCTGCG CGCGGTCGCGG AAGA TCGCGGCTGCG ATTTCCAACTGCTCG Acid345_3497 4124912 - 4126330 + | UDP-glucose 6-dehydrogenase Acid345_3498 4126561 - 4127145 + | transcription antitermination protein nusG TERM 3122 4127143 - 4127157 + F 77 -4.2 -4.88067 | overlap 4127144 GAACGGAGGATGGTC TGATGC GCC GCGTCG TTTTTCTCGCTCCGT Acid345_3499 4127145 - 4128338 + | glycosyl transferase, group 1 Acid345_3500 4130819 - 4128348 - | ABC efflux pump, inner membrane subunit TERM 3123 4129864 - 4129832 - G 72 -9.8 -3.75105 | gap 1, opp_overlap 4129845 4129851 4129851, overlap 4129833 GCAACTGACGAAGAA TGCGCACCG-GCGTG GCGC CGAGCGCGGTGCGCA CCGCGAACTCTTTCT TERM 3124 4129856 - 4129833 - G 70 -12.4 -2.84581 | gap 1, opp_overlap 4129845 4129851 4129851, overlap 4129832 CAACTGACGAAGAAT GCGCACCGGCG TGG CGCCGA-GCGC GGTGCGCACCGCGAA Acid345_3501 4132103 - 4131033 - | 2-nitropropane dioxygenase, NPD TERM 3125 4131656 - 4131668 + g 72 -4.7 -4.57073 | opp_overlap 4131656 TCGCCGTACCGAACA CGAGG ATT CCCCG TTTTTGGGCGCGCTG TERM 3126 4132200 - 4132164 - H 79 -13.2 -2.77192 | gap 1, opp_overlap 4132175, overlap 4132167 4132175 AAGTCGCGGAAGAAG GGACAGAAAAAGCCCGC GGGT GCGGGCTTTTTCT-TCA GAGGATTTGTTGAAT TERM 3127 4132198 - 4132167 - H 85 -16 -2.6563 | opp_overlap 4132175, overlap 4132164 4132175 TCGCGGAAGAAGGGA CAGAAAAAGCCCGC GGGT GCGGGCTTTTTCTT CAGAGGATTTGTTGA TERM 3128 4132175 - 4132190 + H 100 -11.8 -5.06414 | opp_overlap 4132167 4132164 4132175 GAAGGGACAGAAAAA GCCCGC GGGT GCGGGC TTTTTCTTCAGAGGA TERM 3129 4132190 - 4132175 - H 100 -11.8 -5.00642 | opp_overlap 4132175, overlap 4132167 4132164 GAAGGGACAGAAAAA GCCCGC GGGT GCGGGC TTTTTCTTCAGAGGA TERM 3130 4132217 - 4132274 + H 76 -9 -3.92577 | gap 2 AGGATTTGTTGAATG CCTTGCGGGG-GC-CTGGTGGCCTTGCT CGTA GGCCGGGGTTCCAGCGCTCCCCGCATGG TCTTTTTACGGGTTG Acid345_3502 4132464 - 4133150 + | two component LuxR family transcriptional regulator TERM 3131 4134744 - 4134725 - g 71 -12.8 -2.62263 | overlap 4134712 ATGCTCGCGACATCA CCGAGCGC AGCC GCGCCCGG GCACAACTCGAAGTG Acid345_3503 4133242 - 4136373 + | multi-sensor signal transduction histidine kinase Acid345_3504 4136441 - 4136824 + | response regulator receiver protein Acid345_3505 4136828 - 4138825 + | response regulator receiver modulated diguanylate cyclase TERM 3132 4138868 - 4138845 - T 100 -12.4 -5.20534 | overlap 4138846 AGCAACCAATAAAAA TGGGGAGCTC TTTC GAGCTCCCCC AAGTACTCAAACTTC TERM 3133 4138867 - 4138846 - T 100 -15.9 -3.70694 | overlap 4138845 GCAACCAATAAAAAT GGGGAGCTC TTTC GAGCTCCCC CAAGTACTCAAACTT Acid345_3506 4142478 - 4138891 - | Cna B-type protein TERM 3134 4140778 - 4140752 - G 73 -13 -2.82623 | opp_overlap 4140751, overlap 4140757 4140759 GCGGTCTCATAAGCA CCAAACACGCGA TTG TCGCGGGTCTGG ATGTAGTCGCCGCCG TERM 3135 4140937 - 4140915 - G 74 -11.2 -3.6217 | ACCCAGGATAGAGAA GCTCCGCACC GTT GATGCGGGGC ACGGTGTTCGCCTGC TERM 3136 4142678 - 4142694 + r 70 -5.1 -4.4009 | overlap 4142676 AAAAGGTGCGGGGCG TGGCAAT TTC AATGCCA TTTTGTGACATGAAA TERM 3137 4142733 - 4142712 - R 100 -13.1 -4.8048 | opp_overlap 4142676 4142710 4142726 TTGTGACATGAAAAA TGCCACGAT TTGT ATCGTGGCA CGATTTGTAATGTTA kgd 4145222 - 4142760 - | alpha-ketoglutarate decarboxylase TERM 3138 4145163 - 4145183 + g 74 -7.6 -4.1851 | ATGTCCCCAGCGGCG GAACGCGT CCAGA ATGCGTTC TTGTTTCTCGTTTGC Acid345_3508 4146002 - 4145358 - | hypothetical protein Acid345_3509 4146130 - 4146897 + | short-chain dehydrogenase/reductase SDR TERM 3139 4148660 - 4148679 + G 73 -3.5 -4.77036 | opp_overlap 4148658 4148657, overlap 4148658 4148663 4148678 CGCAGTCATGAACCG CGATGGC AACATC GCCATGG TTTTTGCTCGTACCG Acid345_3510 4147029 - 4149341 + | hypothetical protein Acid345_3511 4149715 - 4149473 - | hypothetical protein Acid345_3512 4150661 - 4149774 - | ECF subfamily RNA polymerase sigma-24 factor Acid345_3513 4150741 - 4151244 + | alkylhydroperoxidase AhpD Acid345_3514 4152780 - 4151296 - | PAS/PAC sensor signal transduction histidine kinase Acid345_3515 4153491 - 4154795 + | hypothetical protein Acid345_3516 4154859 - 4156064 + | hypothetical protein TERM 3140 4156082 - 4156103 + F 79 -11.5 -3.75629 | opp_overlap 4156082 TGAGCGCATGAAAAA CCCCGCCGT GTCG AAGGCGGGG TTTCCCTTAGGCCTC TERM 3141 4156103 - 4156082 - f 100 -11.5 -4.7373 | opp_overlap 4156082 TGAGCGCATGAAAAA CCCCGCCGT GTCG AAGGCGGGG TTTCCCTTAGGCCTC Acid345_3517 4158811 - 4159488 + | hypothetical protein Acid345_3518 4159920 - 4159600 - | hypothetical protein Acid345_3519 4162917 - 4159954 - | multi-sensor signal transduction histidine kinase TERM 3142 4162231 - 4162219 - G 79 -5.5 -4.82901 | overlap 4162230 TTCGTTGTAGAAAAA CGCTC CGA AAGCG GCACCGCTGAATTCT TERM 3143 4162319 - 4162331 + g 78 -6.3 -4.59342 | AGAATGCCCGTGTCG TTGAG CGT CTCAA TTTGTTTCTGATAGC TERM 3144 4163013 - 4162989 - R 93 -10.7 -4.4078 | opp_overlap 4162983 4162983 GTCTGCTAAGGAAAA CGGGCACGC GTTTCGA ACGTGCCCG CCTTGCCTGTTTTTG Acid345_3520 4165002 - 4163044 - | acetyl-coenzyme A synthetase TERM 3145 4165089 - 4165058 - R 75 -6.5 -4.4261 | overlap 4165061 CTTGGAATACTAAAA CAAGCGGCCCGTC GTGGAA AACGGACCGCATA AATCTGAGTACTTGA TERM 3146 4165086 - 4165061 - R 90 -10.4 -4.32583 | overlap 4165058 GGAATACTAAAACAA GCGGCCCGTC GTGGAA AACGGACCGC ATAAATCTGAGTACT Acid345_3521 4167025 - 4165115 - | AMP-dependent synthetase and ligase TERM 3147 4167470 - 4167449 - R 100 -15.1 -3.9373 | overlap 4167443 CACGGAAAATGGAAA CGCGCCGCA GTTT CGCGGCGCG TCCGGTCGTGCAAAG Acid345_3522 4168497 - 4167493 - | hypothetical protein Acid345_3523 4168825 - 4169952 + | glycoside hydrolase family protein Acid345_3524 4170329 - 4169949 - | response regulator receiver protein Acid345_3525 4173305 - 4170405 - | Cna B-type protein TERM 3148 4171170 - 4171194 + g 75 -9.4 -3.82202 | CCGGCTGCCAGCGCG CCAATTGATG TTCGC CATCAGTTGG TTCTGTTTGAAGATG Acid345_3526 4174627 - 4173401 - | hypothetical protein TERM 3149 4174140 - 4174165 + g 81 -8.9 -4.32177 | overlap 4174125 4174142 CGGCGGACGACCGTG GTCGGCGTCGT GTGT ACGACGACGTC TTTCTTCTGGCCTCC TERM 3150 4174142 - 4174163 + g 75 -10.1 -3.76219 | overlap 4174125 4174140 GCGGACGACCGTGGT CGGCGTCGT GTGT ACGACGACG TCTTTCTTCTGGCCT Acid345_3527 4175112 - 4174762 - | TPR repeat-containing protein Acid345_3528 4175192 - 4175425 + | hypothetical protein Acid345_3529 4176210 - 4175422 - | hypothetical protein TERM 3151 4175641 - 4175622 - G 79 -7 -4.56775 | overlap 4175623 ACTCGCCGCCAAAAA TCCCGCCG ACGT CAGCGGGC ATGAGATTGGTGATG TERM 3152 4176356 - 4176303 - R 72 -11.9 -2.81815 | gap 1, opp_overlap 4176310, overlap 4176305 4176309 GTTAACCACGAAGGA CACAAAGGGCCACGAAGGA-ACTTGA AGT TCAAAAACCCTTCGTGAACCCTTGTG GCCTTCGTGGTTAAA Acid345_3530 4177290 - 4176382 - | hypothetical protein Acid345_3531 4178556 - 4177354 - | secretion protein HlyD TERM 3153 4178820 - 4178843 + G 78 -11 -3.78953 | GATGGTCACCTACAC GCTGCTGCGA CTCA TCGCAGTGGC TTTCCTGGTAGCGCT Acid345_3532 4178806 - 4180173 + | hypothetical protein Acid345_3533 4180173 - 4181090 + | ABC peptide transporter, inner membrane subunit TERM 3154 4181130 - 4181114 - T 78 -13.7 -2.53263 | GTCATGCTGAACGGA GTCGCGC AGA GCGCGAC GCAGTCGAAGCACCC Acid345_3534 4181887 - 4181171 - | hypothetical protein TERM 3155 4181608 - 4181620 + g 75 -10.5 -3.72576 | TCTTCACCGTCGCAC CCGGC GTC GCCGG TTTCGTCAGCAGCAA Acid345_3535 4182955 - 4181981 - | GTP-binding protein Era Acid345_3536 4184223 - 4182955 - | CBS domain-containing protein Acid345_3537 4184678 - 4184220 - | hypothetical protein TERM 3156 4184718 - 4184695 - R 100 -15.3 -4.67038 | opp_overlap 4184692 TCGTTAAAAGTAAAA CGGGAGGGC GCAAAA GCCCTCCCG CACTATGGTACCAAG Acid345_3538 4185814 - 4184735 - | PhoH-like protein TERM 3157 4185988 - 4186012 + H 71 -8.5 -3.91488 | opp_overlap 4185986 4186009, overlap 4185974 GTTCGGGAGAGTATC CCGGCTGGTTC CGG GAGTCAACCGG TTCTTTGCGGCAGTT Acid345_3539 4186196 - 4186885 + | hypothetical protein Acid345_3540 4187676 - 4187269 - | hypothetical protein Acid345_3541 4189580 - 4187646 - | ATP-dependent DNA helicase RecQ TERM 3158 4188265 - 4188285 + gH 73 -3.3 -4.74103 | gap 1, overlap 4188258 4188268 TCCGAGGGTTGCGGC GCGCGAAG TTTCTT CTTCG-GC TTTTTCCCTTCCGGC Acid345_3542 4189840 - 4190235 + | hypothetical protein TERM 3159 4190702 - 4190679 - T 100 -13.9 -5.06414 | opp_overlap 4190676 GTCGGGCAATAAAAA TGGGCGCGA TCCCCG TCGCGCCCA CACTCTCTACCCCTA Acid345_3543 4192286 - 4190727 - | thiol oxidoreductase-like TERM 3160 4192362 - 4192332 - H 95 -14.9 -3.19463 | gap 1, opp_overlap 4192323 TCCAGTACGGAGGAA GCGGCGCACTGATT CCCC AATCAGTGC-CCGC CAACCCGCTGACTTC Acid345_3544 4192723 - 4195560 + | lysine decarboxylase transcriptional regulator, CadC Acid345_3545 4196433 - 4195579 - | hypothetical protein Acid345_3546 4196497 - 4196766 + | SSU ribosomal protein S20P TERM 3161 4196790 - 4196810 + F 100 -14 -4.85782 | TCCCGTTTCTTCCGA CGGCAGGC CTGGA GCCTGCCG TTTCTTTTTCCGAAA TERM 3162 4197098 - 4197063 - g 70 -11.8 -2.82519 | opp_overlap 4197096, overlap 4197060 4197056 GCACGACAGCAACTA CCGGAGTCGCGCCAGT CTTC ACCAGCACGGCTCCGA CCATCGCGCGCGAAG Acid345_3547 4196927 - 4198750 + | hypothetical protein TERM 3163 4198770 - 4198789 + T 95 -15 -3.60475 | TTCGGAAGCGGAGCG CGGCAGGC TTCG GCCTGCCG TTTGCGCTGGCGCTT TERM 3164 4199041 - 4199061 + T 100 -14 -5.16572 | TGCAATTCGCTTCAA GCCTCGGG ACACA CCCGAGGC TTTTTTGCGTTCCGT TERM 3165 4199110 - 4199089 - T 100 -15.1 -5.06414 | CGTCCCCAATAAAAA CGCCCCGAC CGAA GCCGGGGCG CAACTCAGGAGGTTC Acid345_3548 4199536 - 4199132 - | hypothetical protein Acid345_3549 4199970 - 4199590 - | hypothetical protein Acid345_3550 4200603 - 4200100 - | GCN5-related N-acetyltransferase Acid345_3551 4200695 - 4201084 + | GCN5-related N-acetyltransferase Acid345_3552 4201108 - 4202523 + | hypothetical protein Acid345_3553 4202589 - 4204028 + | hypothetical protein TERM 3166 4204056 - 4204026 - T 83 -12.7 -3.21099 | gap 1, opp_overlap 4204034, overlap 4204029 4204034 GTTCCTGAGCACGAA TAGGAAAAGGCGCC GCGA GGCGCC-TCTCCTA CGAAACATCCAGTTC TERM 3167 4204054 - 4204029 - T 78 -13.3 -2.50016 | opp_overlap 4204034, overlap 4204026 4204034 CCTGAGCACGAATAG GAAAAGGCGCC GCGA GGCGCCTCTCC TACGAAACATCCAGT TERM 3168 4204034 - 4204049 + T 72 -11.8 -2.78463 | opp_overlap 4204029 4204026 4204034 GCACGAATAGGAAAA GGCGCC GCGA GGCGCC TCTCCTACGAAACAT TERM 3169 4204049 - 4204034 - T 95 -11.8 -4.44797 | opp_overlap 4204034, overlap 4204029 4204026 GCACGAATAGGAAAA GGCGCC GCGA GGCGCC TCTCCTACGAAACAT Acid345_3554 4205475 - 4204075 - | hypothetical protein TERM 3170 4205769 - 4205757 - H 71 -10.5 -3.23216 | GCCCACGAGTAGTAA GGCCG CCG CGGCC CAGCATGGACGCCGC Acid345_3555 4205805 - 4206371 + | putative phophoslipid binding protein TERM 3171 4206399 - 4206436 + T 88 -9.9 -4.4891 | gap 1, overlap 4206393 4206400 AATATCTTCTGAGGG TGCCCCATTCTTATCCGT GCA GCGGATAGG-GTGGGGCC TTTTGTCATCCTGAG TERM 3172 4206400 - 4206435 + T 87 -13.4 -3.28864 | gap 1, overlap 4206393 4206399 ATATCTTCTGAGGGT GCCCCATTCTTATCCGT GCA GCGGATAGG-GTGGGGC CTTTTGTCATCCTGA TERM 3173 4206470 - 4206456 - T 72 -11.4 -3.06183 | GTCATCCTGAGCGAA GCACGC GAA GCGTGC GAAGTCGAAGGACCC Acid345_3556 4207401 - 4206526 - | TPR repeat-containing protein TERM 3174 4207524 - 4207499 - H 78 -6.1 -4.7254 | overlap 4207500 4207501 ATTTCTGAGGAAAAA CCCGTGCGAAT TTAC ATTCGCGCGAA ATGGAGAATCTCCGT Acid345_3557 4207587 - 4207835 + | CopG family transcriptional regulator Acid345_3558 4207825 - 4208109 + | addiction module toxin, RelE/StbE Acid345_3559 4209029 - 4208106 - | hypothetical protein Acid345_3560 4209470 - 4209054 - | hypothetical protein TERM 3175 4209563 - 4209544 - R 100 -12.8 -5.0925 | CCCCAAAATCAAAAA CGCCCAGC TCTC GCCGGGCG TCTCGAAATAACCAA Acid345_3561 4210783 - 4209584 - | hypothetical protein TERM 3176 4210539 - 4210556 + g 74 -6.9 -4.37991 | overlap 4210541 GTCTTCGGCCGCGGC GGCGGTG GCGG CACCGGC TTTTCCGTCTTTTTC Acid345_3562 4210970 - 4212763 + | hypothetical protein TERM 3177 4212786 - 4212806 + F 86 -9.7 -4.22524 | overlap 4212763 4212781 TTACGTTCTTCCGAA GGCGAGC CTCTCGT GCTCGCC TTTACTTTTGCGTCT Acid345_3563 4212885 - 4213262 + | PadR family transcriptional regulator Acid345_3564 4213259 - 4213858 + | membrane protein TERM 3178 4214035 - 4214015 - g 77 -10.3 -3.93236 | GACGAATTTGAGAAA GGCAGCGCC AAG GGCGTCGCC ATCCGGTCCGACGGC TERM 3179 4214742 - 4214712 - g 77 -2.4 -5.04249 | overlap 4214715 CGCCGAAAAAAGAAA TCACCGCGCTCGCC GTA GACCAGCAGGGCAA CATATATGCTGCTGG TERM 3180 4215905 - 4215877 - g 71 -8.1 -4.07568 | opp_overlap 4215864, overlap 4215878 TCCGGTCGTGCAAAA CCTTGCCGCCGTC TAT GACGGCAACAATA TCCACACCACCTTCC Acid345_3565 4213910 - 4216285 + | hypothetical protein Acid345_3566 4216404 - 4216994 + | S-isoprenylcysteine methyltransferase-like protein Acid345_3567 4217070 - 4218341 + | LolC/E family lipoprotein releasing system, transmembrane protein Acid345_3568 4218384 - 4218869 + | hypothetical protein Acid345_3569 4218826 - 4219797 + | hypothetical protein Acid345_3570 4219822 - 4220601 + | ABC transporter, ATPase subunit Acid345_3571 4220699 - 4222300 + | hypothetical protein Acid345_3572 4222579 - 4223184 + | ABC transporter, ATPase subunit TERM 3181 4224911 - 4224893 - g 77 -11.8 -3.59738 | GAGGAGACCGCCAAA CTTCTTCG CAT CGAAGAAG AGCTGCACAAGCGCG Acid345_3573 4223414 - 4225870 + | ATPase AAA-2 TERM 3182 4225893 - 4225910 + F 100 -14.1 -4.39329 | opp_overlap 4225893 TTGCTTAACGATGAA GCCCGCC GAAA GGCGGGC TTTGTTGTCTCCGCT TERM 3183 4225910 - 4225893 - f 95 -14.1 -3.27298 | opp_overlap 4225893 TTGCTTAACGATGAA GCCCGCC GAAA GGCGGGC TTTGTTGTCTCCGCT Acid345_3574 4226115 - 4226678 + | TetR family transcriptional regulator Acid345_3575 4226780 - 4227157 + | hypothetical protein TERM 3184 4227377 - 4227356 - g 71 -10.9 -3.28712 | gap 1 GTGGCGCGGCGAGAA CCCCT-CCTC CAA GAGGCAGGGG CCGAGTTCAGCAAAA TERM 3185 4227615 - 4227595 - g 76 -13.3 -2.75343 | overlap 4227594 TTCACACCTGGAAAT CGCTCACCA CTT TGGCGAGCG GCTGGCCCGACGTGG Acid345_3576 4227221 - 4228051 + | short-chain dehydrogenase/reductase SDR TERM 3186 4228092 - 4228076 - T 76 -10.8 -3.65084 | overlap 4228069 4228087 AAGGAAAGGGGGAAA CCCGGG GGAAA CCCGGG GAAAATCGGGGGGAA Acid345_3577 4229004 - 4228186 - | hypothetical protein TERM 3187 4228877 - 4228822 - G 91 -12.5 -4.07885 | gap 1 TAGCTTCTGCGAAAA CTGCAACGCTGCCTGCCGGGCCCGCT CGATC AACGGGTCC-ACAGGCAGCCCCGCCG CATTCGCAGACGGGC Acid345_3578 4229850 - 4229071 - | hypothetical protein TERM 3188 4230188 - 4230199 + H 70 -3 -4.70659 | overlap 4230159 CCCGGAGACAAGTCG TTTG TTTT CAAA TTTTTGCCTGTAACC Acid345_3579 4230476 - 4230844 + | hypothetical protein Acid345_3580 4231746 - 4230868 - | hypothetical protein Acid345_3581 4231917 - 4232738 + | Alpha/beta hydrolase Acid345_3582 4233284 - 4232832 - | hypothetical protein Acid345_3583 4236967 - 4233398 - | hypothetical protein TERM 3189 4234711 - 4234701 - G 87 -8.2 -4.80882 | overlap 4234703 AGCTGATAGTAAAAA GCGC TGG GCGC AAGCAGGATTGGCGA TERM 3190 4235719 - 4235745 + g 76 -12.2 -3.41761 | overlap 4235717 4235725 CAACTGCGCTGGGAT CGACGCCCGTGG TGA CCGCGGTTGTCG TGTTGGTTTTCCCAT Acid345_3584 4237005 - 4237583 + | glyoxalase/bleomycin resistance protein/dioxygenase Acid345_3585 4238483 - 4237599 - | methyltransferase type 11 TERM 3191 4238715 - 4238705 - H 74 -8.2 -3.93659 | overlap 4238697 ACCAAAAGCACGAAA CCCG ACT CGGG TCTAAGCCCACATCT Acid345_3586 4238897 - 4239145 + | hypothetical protein Acid345_3587 4239149 - 4239466 + | XRE family transcriptional regulator Acid345_3588 4240699 - 4239476 - | hypothetical protein TERM 3192 4239746 - 4239734 - G 72 -5.5 -4.5448 | overlap 4239735 CAGGTAGAAAAAGAA CGGCA CTC TGCCA TATACCATCATCACC Acid345_3589 4240957 - 4242096 + | hypothetical protein Acid345_3590 4242192 - 4242584 + | hypothetical protein TERM 3193 4242616 - 4242636 + T 74 -11.1 -3.2827 | opp_overlap 4242616 ACGAGAAATACAAAA GCCCCGG CTACTGA CCGGGGC TTCGTCATTGAATAA TERM 3194 4242636 - 4242616 - T 100 -11.8 -4.85822 | opp_overlap 4242616 ACGAGAAATACAAAA GCCCCGGC TACTG ACCGGGGC TTCGTCATTGAATAA Acid345_3591 4245120 - 4242658 - | ABC efflux pump, inner membrane subunit TERM 3195 4242854 - 4242802 - G 71 -10.5 -3.52918 | gap 1, overlap 4242798 CAATTGGGAAACGAA GCGCAG-GACGGCCTTCATCGCGG CGAATC CCACGACGACGCCCGCCGCCACGC CGATTCCCGCCATAA TERM 3196 4243900 - 4243842 - G 72 -4.4 -4.62069 | GCGTCACCGCAAAAA TCCGCAAC-CGTCGGCCGTTGGCGCCCG TAACC CGCGTGCCCACGCCCGCCGCGCT-CAGA CTGCGCGAAACCTGC TERM 3197 4245291 - 4245275 - R 100 -10.8 -4.8048 | opp_overlap 4245275 TGTTCACACGAAAAA CCCGCC ACAGG GGCGGG TTTCTCCAATGATCC TERM 3198 4245275 - 4245291 + r 80 -10.8 -3.90318 | opp_overlap 4245275 TGTTCACACGAAAAA CCCGCC ACAGG GGCGGG TTTCTCCAATGATCC Acid345_3592 4247548 - 4245317 - | hypothetical protein TERM 3199 4246533 - 4246517 - G 71 -10.1 -3.53012 | opp_overlap 4246516 4246513 CGTGGTGTCGCCAAA GGCCGGA ACG TCCGACC ATGGTTCGCTCAGCG TERM 3200 4247947 - 4247926 - R 100 -15.9 -3.9941 | TTCCGCACAAGCAAA GAGGGCTGC CTAT GCAGCCCTC GCACTCATTTGCAAC Acid345_3593 4248722 - 4248147 - | hypothetical protein Acid345_3594 4248873 - 4250330 + | integrin-like protein TERM 3201 4250380 - 4250359 - T 100 -15.9 -4.99134 | opp_overlap 4250356 4250359 4250361 ATTGCAAATGAAAAA GAGGGCTGC ACTG GCAGCCCTC TCCTTATCCAACCTG TERM 3202 4250359 - 4250380 + T 86 -15.9 -2.8294 | opp_overlap 4250359, overlap 4250356 4250361 ATTGCAAATGAAAAA GAGGGCTGC ACTG GCAGCCCTC TCCTTATCCAACCTG TERM 3203 4250361 - 4250378 + T 79 -12.7 -2.96274 | opp_overlap 4250359, overlap 4250359 4250356 TGCAAATGAAAAAGA GGGCTGC ACTG GCAGCCC TCTCCTTATCCAACC Acid345_3595 4252904 - 4250403 - | kelch domain-containing protein TERM 3204 4253104 - 4253125 + r 79 -13 -3.00298 | opp_overlap 4253104 CACGCTTACAACAAA GCCCGCCT TTATTT AGGCGGGC TGTATCGTTCACCGA TERM 3205 4253125 - 4253104 - R 100 -13 -4.31433 | opp_overlap 4253104 CACGCTTACAACAAA GCCCGCCT TTATTT AGGCGGGC TGTATCGTTCACCGA Acid345_3596 4254323 - 4253151 - | Rh-like protein/ammonium transporter TERM 3206 4254097 - 4254081 - G 72 -9.3 -3.72374 | opp_overlap 4254092, overlap 4254079 4254083 GCGCAGCAATAAATA GAGCGGG ATC CCCGCGC CCACGACGAGGTACG Acid345_3597 4255039 - 4254575 - | hypothetical protein TERM 3207 4255281 - 4255262 - g 74 -2 -4.98531 | overlap 4255263 GCGCGAAATGAAAAA GGGTGACG AACT CGTCATCT ACCACACCGGCGACG Acid345_3598 4255137 - 4255514 + | hypothetical protein TERM 3208 4255546 - 4255521 - T 100 -15.5 -3.93556 | opp_overlap 4255521 ATCCATTGAACGAAA TTGCCGGATGG TCTC CCACCCGGCAA TTGTCTTGTTCGATA TERM 3209 4255521 - 4255546 + T 93 -13.3 -3.84389 | opp_overlap 4255521 ATCCATTGAACGAAA TTGCCGGATGG TCTC CCACCCGGCAA TTGTCTTGTTCGATA TERM 3210 4255567 - 4255600 + T 78 -6.6 -4.62069 | gap 1, opp_overlap 4255566, overlap 4255568 TTGTTCGATAGAGAC GCGCGGCTGACGGCT TAGTT GGACGTC-GCCGCGG TTTTTACCGTGACCG TERM 3211 4255568 - 4255599 + T 70 -10.1 -3.3692 | gap 1, opp_overlap 4255566, overlap 4255567 TGTTCGATAGAGACG CGCGGCTGACGGCT TAGTT GGACGTC-GCCGCG GTTTTTACCGTGACC Acid345_3599 4257665 - 4255581 - | hypothetical protein TERM 3212 4258073 - 4258026 - R 95 -14.9 -3.59262 | gap 1, opp_overlap 4258024, overlap 4258029 TGCTAGAGTGCTAAA TGAGGCTCAGTAGGCCC-AGGC GACAA GCCCAGGGCCCACTGAGCCGAA AGTGTCTCTGGCCTC TERM 3213 4258070 - 4258029 - R 100 -21 -2.92171 | gap 1, opp_overlap 4258024, overlap 4258026 TAGAGTGCTAAATGA GGCTCAGTAGGCCC-AGGC GACAA GCCCAGGGCCCACTGAGCC GAAAGTGTCTCTGGC TERM 3214 4258171 - 4258159 - R 83 -10.5 -4.06502 | GAGGCCCAAACCAAA CCGCC GGA GGCGG GGGCAAGCTTGCGCA TERM 3215 4258231 - 4258268 + r 75 -12.1 -3.00774 | opp_overlap 4258209, overlap 4258236 GACGACGGTCCGCAG TCGAAGCGGAGGCAG CAAGGCCT CTGTCTCCGCTTCAA TCTCTCGTTCGAATC TERM 3216 4258236 - 4258263 + r 71 -10.6 -3.17685 | overlap 4258231 CGGTCCGCAGTCGAA GCGGAGGCAG CAAGGCCT CTGTCTCCGC TTCAATCTCTCGTTC Acid345_3600 4260608 - 4258308 - | periplasmic sensor hybrid histidine kinase TERM 3217 4259987 - 4259971 - G 73 -2.9 -4.7889 | AGAAAGAGCGAAAAA CGCCA GAAGAAG CGGCG TGTGGACCGTGAGCG Acid345_3601 4261890 - 4260739 - | hypothetical protein Acid345_3602 4262219 - 4263889 + | TPR repeat-containing protein Acid345_3603 4263977 - 4264318 + | PadR family transcriptional regulator TERM 3218 4265215 - 4265161 - g 71 -10.9 -3.19889 | gap 3, overlap 4265169 CAGGAACAGATTGAA GGCCAGAACACGATGAACG-CGCGCG GTAAGT CG-GCGACGTTCATGGTGATC-GGCC ACCTGAAATCGGGCA Acid345_3604 4264315 - 4266969 + | ABC efflux pump, inner membrane subunit TERM 3219 4266991 - 4266975 - T 80 -10.8 -3.85704 | opp_overlap 4266967 4266966 CGAGGAATGAGGAAA GCCCGC GTCGT GCGGGC TCTCGCAGTTTCGTA Acid345_3605 4267324 - 4267016 - | hypothetical protein TERM 3220 4267325 - 4267335 + H 70 -6.8 -4.16943 | overlap 4267315 4267313 TCTTGCTTCGTTCAC GGAG TAT CTCC TTTTCAGGTCTGGAG Acid345_3606 4267707 - 4268267 + | translation elongation factor P (EF-P) Acid345_3607 4268334 - 4268666 + | acylphosphatase Acid345_3608 4268667 - 4269215 + | adenine phosphoribosyltransferase TERM 3221 4269261 - 4269220 - T 100 -13.1 -4.59069 | gap 1, overlap 4269221 4269253 4269256 ACGACAAGTAGAAAA TCCCCACCCT-ATCGCGC AACATAG GCGCGATAAGGATGGGGC ACCCAGAGTTTCAGA TERM 3222 4269260 - 4269221 - T 100 -16.6 -3.34357 | gap 1, overlap 4269220 4269253 4269256 CGACAAGTAGAAAAT CCCCACCCT-ATCGCGC AACATAG GCGCGATAAGGATGGGG CACCCAGAGTTTCAG TERM 3223 4269310 - 4269286 - T 100 -11.4 -5.4251 | opp_overlap 4269288, overlap 4269288 TTCAGAGACAAAAAA GAGGGCGCTC GCGAA GAGCGCCCTT TGTCATGGCTACAGT TERM 3224 4269308 - 4269288 - T 100 -14 -4.34353 | opp_overlap 4269288, overlap 4269286 CAGAGACAAAAAAGA GGGCGCTC GCGAA GAGCGCCC TTTGTCATGGCTACA TERM 3225 4269288 - 4269308 + T 100 -14 -3.97947 | opp_overlap 4269288 4269286 CAGAGACAAAAAAGA GGGCGCTC GCGAA GAGCGCCC TTTGTCATGGCTACA Acid345_3609 4271874 - 4269325 - | ABC efflux pump, inner membrane subunit Acid345_3610 4272068 - 4273015 + | hypothetical protein Acid345_3611 4273034 - 4273375 + | hypothetical protein Acid345_3612 4274342 - 4273479 - | 4-hydroxybenzoate polyprenyltransferase, putative TERM 3226 4274056 - 4274045 - G 79 -5.8 -4.78572 | overlap 4274046 CGGCAACGAAGAAAA TCGC CGCG GCGA TCAGCGTAAATACCA Acid345_3613 4275350 - 4274352 - | NAD-dependent epimerase/dehydratase TERM 3227 4275478 - 4275495 + r 81 -12.7 -3.06183 | GGGTCTTTCGACTTC GCAGCGC CTGC GCGCTGC TTCGCTCAGGATGAC Acid345_3614 4276841 - 4275534 - | 3-phosphoshikimate 1-carboxyvinyltransferase TERM 3228 4276168 - 4276185 + g 74 -7.7 -4.10007 | gap 1, overlap 4276184 CGAAACTTGGCCCCG CCGCG-CA CGC TGACGCGG TTTTGGCGGCGTTCT TERM 3229 4276376 - 4276422 + g 73 -12.1 -3.09015 | overlap 4276366 4276363 TGCTGCCGCGAACGC GCAGCGGGGCGTGGCCGTCGG TGGTT TCGATGTCCCCGCCCATCTGC TTCAGTGGGTCTACG TERM 3230 4277566 - 4277549 - g 79 -12.7 -3.2661 | opp_overlap 4277547 4277546, overlap 4277547 GAAGCAGGTAGAAGA GGCGCTG CAGG CAGCGCC AGATTATGCGGCCGC Acid345_3615 4277040 - 4278101 + | TPR repeat-containing protein TERM 3231 4278143 - 4278157 + T 79 -11.4 -3.73775 | overlap 4278142 GAGTCCTTCGACTTC GCACGC TTT GCGTGC TTTGCTCACGATGAC Acid345_3616 4278564 - 4278163 - | hypothetical protein TERM 3232 4278243 - 4278224 - G 74 -6.3 -4.52857 | opp_overlap 4278206, overlap 4278225 ATGCCGCAGACAAAA CGCGGCG TCAGTT CGCTGCG CCCCCAACGCAAAAC Acid345_3617 4279342 - 4278632 - | hypothetical protein Acid345_3618 4279888 - 4279388 - | crossover junction endodeoxyribonuclease RuvC TERM 3233 4279514 - 4279528 + g 75 -5.6 -4.62471 | CAGGCGCGCGACCAT TGCCTG CAC CTGGCA TTTTTCGGCCTTGCC Acid345_3619 4282147 - 4280102 - | carbon starvation protein CstA Acid345_3620 4282735 - 4282217 - | response regulator receiver protein TERM 3234 4283012 - 4283001 - g 75 -3.6 -4.72272 | opp_overlap 4283003, overlap 4283003 GTGCTGCAGGAAAAA CGCG TCTG CGCA ACCCCCGACGTACTT TERM 3235 4283979 - 4283966 - g 75 -3.7 -4.80959 | overlap 4283967 4283968 CAAGGCAGAAGAAAA GGTCG TGGG CGCCC CGAAGATGGCGAAGA Acid345_3621 4282869 - 4285589 + | DNA helicase/exodeoxyribonuclease V, subunit B TERM 3236 4286725 - 4286746 + G 70 -12.3 -2.72263 | overlap 4286724 AAGGCCCTGTTCCGG GTCCTGCCG CTGG CGGTAGGAC ATTTGCGGACGGTGT TERM 3237 4287857 - 4287847 - g 73 -3.2 -4.74801 | GAAGTGGACGAAAAA CGCT TGG AGCA GGAAATCTCAAGGCT Acid345_3622 4285579 - 4288986 + | DNA helicase/exodeoxyribonuclease V, subunit A TERM 3238 4290150 - 4290192 + G 81 -15 -2.58699 | opp_overlap 4290138, overlap 4290146 GGACTACCTCGTGGT CGGCGTTCCCACTACAAT CCTTACC ATTGCGGTGGGAACGCTG TGGATTGCGTTCTTC Acid345_3623 4288990 - 4290216 + | citrate transporter TERM 3239 4290666 - 4290644 - g 78 -8.4 -4.24342 | TGGCGGAGGAAGAAA TTTCGCACGA GCA TCGCGCGGAA GAACTGCAAGAAGAA Acid345_3624 4290232 - 4291188 + | rubrerythrin Acid345_3625 4291496 - 4291185 - | hypothetical protein TERM 3240 4292001 - 4291975 - g 93 -9.4 -4.78107 | opp_overlap 4291996 CACGACCACGAAAAA GAAGAGCACTTC CAA GAAGGGCGCTTC CAGTGTTGAGTCGCA Acid345_3626 4291865 - 4293646 + | hypothetical protein TERM 3241 4293676 - 4293664 - f 73 -9.1 -3.87116 | opp_overlap 4293664 4293665 4293669, overlap 4293665 4293667 GAAACAGAACTCAAA CCAGG CGG CCTGG AGAATTCTCCGGGCC TERM 3242 4293664 - 4293697 + F 100 -13.1 -4.53303 | opp_overlap 4293664 4293665 4293667, overlap 4293665 4293669 GAAACAGAACTCAAA CCAGGCGGCCTGGAG AATT CTCCGGGCCGTTTGC TTTTGTATCGCGCTG TERM 3243 4293665 - 4293696 + F 100 -16.6 -3.315 | opp_overlap 4293664 4293665 4293667, overlap 4293664 4293669 AAACAGAACTCAAAC CAGGCGGCCTGGAG AATT CTCCGGGCCGTTTG CTTTTGTATCGCGCT TERM 3244 4293669 - 4293692 + F 100 -16 -4.30161 | opp_overlap 4293664 4293667 4293665, overlap 4293665 4293664 AGAACTCAAACCAGG CGGCCTGGAG AATT CTCCGGGCCG TTTGCTTTTGTATCG Acid345_3627 4293725 - 4294909 + | glycoside hydrolase family protein Acid345_3628 4296316 - 4294910 - | UDP-N-acetylmuramate--L-alanine ligase TERM 3245 4296333 - 4296322 - R 77 -4.4 -4.89477 | opp_overlap 4296302 TCGCGAACAAGAAAA TTCC TCGG GGAA CTCATTGTTTTATCA TERM 3246 4296609 - 4296643 + r 100 -20.8 -2.98015 | opp_overlap 4296609, overlap 4296611 GTGCCTCCTAAGCAA TCCGGCCTACGCCGTT CTC AGCGGCGTAGGCCGAA TGTCTGATGGTTGAG TERM 3247 4296643 - 4296609 - R 100 -20.8 -3.33696 | opp_overlap 4296609 4296611 GTGCCTCCTAAGCAA TCCGGCCTACGCCGTT CTC AGCGGCGTAGGCCGAA TGTCTGATGGTTGAG TERM 3248 4296732 - 4296755 + r 84 -13.2 -3.05816 | GGAACAACTCGTATC GCTCTGTGAG GTAG CTCACAGGGC TTGGGTCGCCGCTAA Acid345_3629 4297852 - 4296767 - | UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase Acid345_3630 4298945 - 4297854 - | cell cycle protein Acid345_3631 4300307 - 4298946 - | UDP-N-acetylmuramoylalanine--D-glutamate ligase TERM 3249 4299114 - 4299134 + g 76 -6.8 -4.43309 | GTTTTCGAGGGTCTC GGCGTGGA CGACT TCCACACC TTTTACTTCGGCTTC Acid345_3632 4301487 - 4300348 - | phospho-N-acetylmuramoyl-pentapeptide-transferase Acid345_3633 4302982 - 4301606 - | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase Acid345_3634 4304508 - 4302979 - | UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase TERM 3250 4303094 - 4303106 + g 77 -2.6 -5.16237 | overlap 4303071 4303065 GGGAAGACGCCTTCG CGCG TGGTC TGCG TTTTTTCGTGGCCTT TERM 3251 4303522 - 4303507 - G 77 -11.8 -3.54424 | GCTCACGCGCTCAAA GCGGCC CGGC GGCCGC ACGATGTGCGTGATC TERM 3252 4304248 - 4304231 - G 81 -11.3 -3.86346 | GGATGCTTGTAGAAA TTCGCGC TCAG GCGCGAA AGGGCGCGGCGTCCG Acid345_3635 4307132 - 4304943 - | peptidoglycan glycosyltransferase Acid345_3636 4307861 - 4307379 - | hypothetical protein Acid345_3637 4308031 - 4307861 - | hypothetical protein Acid345_3638 4309128 - 4308187 - | methyltransferase TERM 3253 4308610 - 4308657 + g 78 -11.4 -3.66844 | opp_overlap 4308618 4308619 4308621, overlap 4308611 4308618 CCTTTCCTCACCGAA TTCGTAAATCACATCAGCAAGC TCAC GCTCGCTGGTGTGGTTTACCAC TTGTTCGGCTGTGAG TERM 3254 4308611 - 4308656 + g 83 -14.9 -2.79785 | opp_overlap 4308618 4308619 4308621, overlap 4308610 4308618 CTTTCCTCACCGAAT TCGTAAATCACATCAGCAAGC TCAC GCTCGCTGGTGTGGTTTACCA CTTGTTCGGCTGTGA TERM 3255 4308618 - 4308649 + g 78 -11.6 -3.64049 | opp_overlap 4308618 4308619 4308621, overlap 4308611 4308610 CACCGAATTCGTAAA TCACATCAGCAAGC TCAC GCTCGCTGGTGTGG TTTACCACTTGTTCG TERM 3256 4308648 - 4308619 - G 73 -12.9 -2.7644 | opp_overlap 4308618 4308611 4308610, overlap 4308618 4308621 ACCGAATTCGTAAAT CACATCAGCAAGC TCAC GCTCGCTGGTGTG GTTTACCACTTGTTC Acid345_3639 4309571 - 4309128 - | hypothetical protein Acid345_3640 4310041 - 4310616 + | hypothetical protein Acid345_3641 4310710 - 4311342 + | negative transcriptional regulator Acid345_3642 4311427 - 4312242 + | hypothetical protein TERM 3257 4312312 - 4312299 - f 70 -6.7 -4.07687 | ATGCTGGTTCTAAAA TCTCG GTCC CGAGA ATAATCGGGTGAGAA Acid345_3643 4312332 - 4312628 + | hypothetical protein Acid345_3644 4312658 - 4313143 + | hypothetical protein Acid345_3645 4313140 - 4313784 + | hypothetical protein TERM 3258 4315195 - 4315215 + G 84 -12.5 -3.68244 | TCTATTCCCAGATGG TGCACGCCG GAG CGGCGGGCA TTTGGCATTGGTCGT Acid345_3646 4313889 - 4315649 + | hypothetical protein Acid345_3647 4318117 - 4315652 - | ABC efflux pump, inner membrane subunit Acid345_3648 4318929 - 4318249 - | protein of unknown function DUF71, ATPase Acid345_3649 4319622 - 4319155 - | hemerythrin-like, metal-binding TERM 3259 4319495 - 4319505 + g 74 -6.8 -4.2558 | GCCAGCAGGCGTAAC TCGC ACA GCGA TTTTCCTCCGGCATC Acid345_3650 4320033 - 4319635 - | hemerythrin-like, metal-binding Acid345_3651 4320479 - 4320021 - | hemerythrin-like, metal-binding Acid345_3652 4320556 - 4321569 + | oxidoreductase TERM 3260 4321712 - 4321699 - T 81 -3.7 -5.27476 | TGTAACAAAAGAAAA CGTGC AGCC GCTCG CAATTGCCATGGTTT Acid345_3653 4323448 - 4322405 - | aldo/keto reductase TERM 3261 4323433 - 4323423 - G 74 -6.8 -4.36914 | GCGCTTTTTAGAAAA GACC GCC GGTC GAAGTCGCTGCTCAT Acid345_3654 4324440 - 4323445 - | aldo/keto reductase TERM 3262 4325134 - 4325109 - g 90 -11.1 -4.36914 | gap 1 CGCCCTCCGACAAAA CGCACGCGCGCC AGA AGCACGCG-GCG GACATCCTGGAGGCG Acid345_3655 4324550 - 4326070 + | TPR repeat-containing protein Acid345_3656 4326083 - 4327198 + | aminopeptidase DmpA Acid345_3657 4327217 - 4328170 + | hypothetical protein Acid345_3658 4328731 - 4329663 + | hypothetical protein Acid345_3659 4330868 - 4329780 - | diguanylate cyclase with GAF sensor TERM 3263 4330686 - 4330707 + g 71 -7.3 -4.21908 | gap 1, overlap 4330687 4330688 GAGTGACCAGGTATC GG-GGCGGAA ATA TTCCGCCATC TTTTCCATAATGGTC TERM 3264 4330688 - 4330704 + g 70 -12.3 -2.81922 | overlap 4330687 4330686 GTGACCAGGTATCGG GGCGGAA ATA TTCCGCC ATCTTTTCCATAATG TERM 3265 4330860 - 4330880 + g 74 -8.3 -4.15565 | overlap 4330861 GCCTCGAGGGTCGAG TTGGGACAT TAT ATGTCCCGG TTTTCACCTGCTGCA TERM 3266 4331126 - 4331106 - H 71 -9.7 -3.53091 | AGTTGCGTCGGGAAA GGGAGATGC GCG GCATCTCGC TCGACGAAATCGCCG Acid345_3660 4331111 - 4331977 + | hypothetical protein Acid345_3661 4332171 - 4333352 + | S-adenosylmethionine synthetase TERM 3267 4333411 - 4333367 - f 75 -11.5 -3.32294 | opp_overlap 4333404, overlap 4333369 4333370 GCAAATCCCTGAGAA CATCCCCGTCCT-ATCCCGCG GAGAA CGCGGGGTCAGGACGGGG-CA CCCGAATTTCAAAAG TERM 3268 4333410 - 4333369 - f 100 -16.6 -3.22668 | gap 1, opp_overlap 4333404, overlap 4333367 4333370 AAATCCCTGAGAACA TCCCCGTCCT-ATCCCGCG GAGAA CGCGGGGTCAGGACGGGGC ACCCGAATTTCAAAA TERM 3269 4333409 - 4333370 - f 100 -20.1 -2.53119 | gap 1, opp_overlap 4333404, overlap 4333369 4333367 AATCCCTGAGAACAT CCCCGTCCT-ATCCCGCG GAGAA CGCGGGGTCAGGACGGGG CACCCGAATTTCAAA TERM 3270 4333529 - 4333515 - g 70 -4.2 -4.57569 | overlap 4333516 4333517 GGACCTGGGCAAAAA GCGCAT CGA ATGGGC GAACCAGTCGATGAA Acid345_3662 4333444 - 4334724 + | S-adenosyl-L-homocysteine hydrolase TERM 3271 4334773 - 4334753 - T 91 -9.6 -4.63479 | opp_overlap 4334753 CAGCAGAAAGTAAAA GGGGCGGC CTGGT GCCGTCCC TTTACTATTCCAAGC TERM 3272 4334753 - 4334773 + T 90 -11.8 -3.92324 | opp_overlap 4334753 CAGCAGAAAGTAAAA GGGGCGGC CTGGT GCCGTCCC TTTACTATTCCAAGC Acid345_3663 4335383 - 4334778 - | TetR family transcriptional regulator Acid345_3664 4335479 - 4335826 + | hypothetical protein TERM 3273 4335855 - 4335827 - T 100 -19 -3.15544 | opp_overlap 4335831, overlap 4335831 CCCGATGCGCATTAA CAAAGGGACGGC TTGAT GCCGTCCCTTTG GCTTGGCGCTTAGTT TERM 3274 4335831 - 4335851 + T 95 -14 -3.75897 | opp_overlap 4335827 4335831 ATGCGCATTAACAAA GGGACGGC TTGAT GCCGTCCC TTTGGCTTGGCGCTT TERM 3275 4335851 - 4335831 - T 100 -14 -4.2461 | opp_overlap 4335831, overlap 4335827 ATGCGCATTAACAAA GGGACGGC TTGAT GCCGTCCC TTTGGCTTGGCGCTT Acid345_3665 4336707 - 4335865 - | hypothetical protein Acid345_3666 4337420 - 4336725 - | hypothetical protein TERM 3276 4337111 - 4337071 - G 70 -12.4 -2.78384 | TGCTTCGCGACGACA GGCGTGGACTGCGGGCGC GCACT GCGCCAGTAGAGCACGCC AATTGCAAGGCACAG Acid345_3667 4338001 - 4337417 - | ECF subfamily RNA polymerase sigma-24 factor Acid345_3668 4339063 - 4338587 - | putative thiol-disulfide isomerase and thioredoxin Acid345_3669 4340071 - 4339235 - | 2-dehydro-3-deoxyphosphooctonate aldolase TERM 3277 4339439 - 4339453 + g 74 -11.4 -3.53012 | GGGCTGTCCACCGGA GACGGC ATG GCCGTC TTTGCCGGCCGAGGG Acid345_3670 4341747 - 4340071 - | CTP synthetase TERM 3278 4342024 - 4342013 - g 95 -7.2 -5.44119 | CGGAGCGCAAAAAAA GGCG GAGT CGCC GGCAGAGTTGGCGGA Acid345_3671 4341939 - 4342436 + | hypothetical protein TERM 3279 4342456 - 4342471 + F 93 -11.8 -4.35926 | overlap 4342466 ATTTCGTCCCACGAT CCCCGC TGCG GCGGGG TTTTCGCTTTACAGT Acid345_3672 4342561 - 4343496 + | DMT family permease Acid345_3673 4343646 - 4344290 + | hypothetical protein TERM 3280 4344297 - 4344325 + T 100 -13.8 -4.41348 | GCGCGCTAACGCCGA GCCGGGGAGGGC GGGAG GGCCTCTCCGGC TTTATTTCAGCGCCA Acid345_3674 4345739 - 4344327 - | hypothetical protein TERM 3281 4344564 - 4344584 + g 93 -14 -3.84451 | CAGGCCGACGTGCGG GCCGCCGA TCCCT TCGGCGGC TTTGCCTTTGAAAAA TERM 3282 4345674 - 4345709 + g 83 -14 -3.54424 | overlap 4345672 TGCGATGGAGGATCG CTCGGCGCAGGCGT TGATGAGT GCGGCTGCGCCGAG TTTGGCGACGTCACG Acid345_3675 4346710 - 4345763 - | NmrA-like TERM 3283 4346393 - 4346433 + g 72 -9 -3.92324 | gap 2 CGCATGTTGCACGCC CGCAGC-GGCTGCG-GCCTT CGC GAGGTTCGCGGCCTGCTGGG TTTCGTGTTCGGGGG Acid345_3676 4346825 - 4347838 + | hypothetical protein Acid345_3677 4348302 - 4347835 - | hypothetical protein Acid345_3678 4349420 - 4348389 - | hypothetical protein Acid345_3679 4350913 - 4349498 - | glutamate synthase (NADH) small subunit TERM 3284 4350105 - 4350119 + g 84 -7 -4.77165 | TCGTTCACAGCTAGA CCGGAG TTA CGCCGG TTTTGTTGTGGCAGG Acid345_3680 4355513 - 4350906 - | glutamate synthase (NADH) large subunit TERM 3285 4352579 - 4352593 + g 71 -11.4 -3.20345 | overlap 4352577 CGCCCTCGCCGGGCT TGGCGC CCT GCGCCA TCTTGATCTGCAGTT TERM 3286 4355278 - 4355293 + g 77 -11.8 -3.57144 | ACCTGGATGGTGATG CCGGCG CCGT CGCCGG TTTCGGGATCGCAGC TERM 3287 4355541 - 4355522 - H 90 -10.7 -4.35926 | opp_overlap 4355522 4355540 ACTGCAAATGCAAAA CCCGCCT GGTCTT AGGCGGG TTTGAGAACCTTTGG TERM 3288 4355522 - 4355541 + H 77 -11.4 -3.56594 | opp_overlap 4355522, overlap 4355540 ACTGCAAATGCAAAA CCCGCCTG GTCT TAGGCGGG TTTGAGAACCTTTGG TERM 3289 4355593 - 4355617 + H 100 -14.3 -3.96327 | ACACTTCGCCTTTGT GCGCATAGCCG ACT TGGCTGTGCGC TTTGTAATAGCGACT TERM 3290 4355913 - 4355887 - H 95 -15.1 -3.29591 | opp_overlap 4355887, overlap 4355882 AGCACTTAAACTCAA CCCGCCGACGC GCACA GCGTCCGCGGG TTTTTCGTTTGCGAG TERM 3291 4355887 - 4355913 + H 100 -15.1 -4.98531 | opp_overlap 4355887 4355882 AGCACTTAAACTCAA CCCGCCGACGC GCACA GCGTCCGCGGG TTTTTCGTTTGCGAG Acid345_3681 4355934 - 4356269 + | phosphoribosyl-AMP cyclohydrolase hisG 4356266 - 4357135 + | ATP phosphoribosyltransferase TERM 3292 4357267 - 4357257 - g 71 -8.2 -4.015 | CGATGTACGAAAGAA CGGC GAC GCCG CGCTACGACGGTACG Acid345_3683 4357135 - 4358382 + | histidinol dehydrogenase Acid345_3684 4358375 - 4359445 + | histidinol phosphate aminotransferase Acid345_3685 4359442 - 4360029 + | imidazoleglycerol-phosphate dehydratase Acid345_3686 4360026 - 4360622 + | imidazole glycerol phosphate synthase subunit hisH Acid345_3687 4360616 - 4361377 + | imidazole glycerol phosphate synthase subunit hisF TERM 3293 4361532 - 4361560 + G 71 -7.4 -4.1466 | opp_overlap 4361526 4361525 4361523 4361538 AGCAAAGAGGCAAGG CGATAACCGCGA ACTCA TCGCGAATATCG TTTTGCGACTTCCCT Acid345_3688 4361371 - 4362057 + | 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase TERM 3294 4362661 - 4362634 - g 74 -7.6 -4.10453 | overlap 4362624 4362623 4362635 TAAAGCGGCGCAAAA TCGCCGAGACCC TGGA GCGTCTCGACGT GCTGCCTCTCTCTGA Acid345_3689 4362057 - 4364759 + | phosphoenolpyruvate carboxylase Acid345_3690 4366569 - 4364770 - | ABC transporter, ATPase subunit Acid345_3691 4366674 - 4367765 + | hypothetical protein TERM 3295 4367800 - 4367826 + F 81 -13.1 -3.04144 | opp_overlap 4367805, overlap 4367805 TTGCAATTCTTGACA GAAAAGGCCTG AATAC CGGGCCTTTTC TCTTGCCGGTCAGGA TERM 3296 4367821 - 4367805 - f 73 -5.7 -4.52857 | opp_overlap 4367805 4367800 ATTCTTGACAGAAAA GGCCTGA ATA CCGGGCC TTTTCTCTTGCCGGT TERM 3297 4367805 - 4367821 + F 83 -7.2 -4.66938 | opp_overlap 4367805, overlap 4367800 ATTCTTGACAGAAAA GGCCTG AATAC CGGGCC TTTTCTCTTGCCGGT Acid345_3692 4367937 - 4368536 + | hypothetical protein Acid345_3693 4369001 - 4369612 + | superoxide dismutase TERM 3298 4369635 - 4369652 + T 90 -12.7 -3.83026 | CGTTAACCGCATCGA TGCCGCC TGCG GGCGGCA TTTCCTATGCGGCCA Acid345_3694 4371309 - 4369657 - | FAD dependent oxidoreductase TERM 3299 4371063 - 4371028 - G 79 -12.5 -3.27298 | overlap 4371024 4371032 GCGCTCAACCAGCAA GCGATCGCGCTCACG GAGCGT CTCGCGCGCGATCGC AAAGTCGCCGCGCTC TERM 3300 4371602 - 4371587 - g 72 -4.6 -4.56597 | opp_overlap 4371576, overlap 4371589 GCTGGCTTGCAAAAA CATGCG TTGC CGCAAG CGTTTTGAGGTGTCG Acid345_3695 4371363 - 4371647 + | hypothetical protein TERM 3301 4372231 - 4372217 - g 84 -7 -4.84146 | overlap 4372218 4372219 AGGAGACAAAAGAAA CCGCGC AGC GCGTGG ATAACGCCGCGGATC Acid345_3696 4371874 - 4372638 + | hypothetical protein TERM 3302 4372698 - 4372668 - f 74 -11.1 -3.3095 | opp_overlap 4372658 4372672, overlap 4372672 ACAGACCTGTTAGAA GCAAGGGCAGTGC GCACA GCGCTGCCCTTTC GCTTTCCCGGTTTTG TERM 3303 4372672 - 4372694 + F 90 -12.7 -3.84719 | opp_overlap 4372668 4372672, overlap 4372658 ACCTGTTAGAAGCAA GGGCAGTGC GCACA GCGCTGCCC TTTCGCTTTCCCGGT TERM 3304 4372694 - 4372672 - f 73 -10.5 -3.44325 | opp_overlap 4372672 4372658, overlap 4372668 ACCTGTTAGAAGCAA GGGCAGTGC GCACA GCGCTGCCC TTTCGCTTTCCCGGT Acid345_3697 4372831 - 4373601 + | electron transfer flavoprotein beta-subunit Acid345_3698 4373662 - 4373928 + | hypothetical protein Acid345_3699 4374145 - 4374390 + | hypothetical protein Acid345_3700 4374418 - 4375401 + | electron transfer flavoprotein, alpha subunit TERM 3305 4375534 - 4375518 - T 86 -10.8 -4.07678 | opp_overlap 4375518 GCCTAAAATACGAAA CCCGCG ATTTA CGCGGG TTTTTAACTGGCGGA TERM 3306 4375518 - 4375534 + T 95 -10.8 -4.65895 | opp_overlap 4375518 GCCTAAAATACGAAA CCCGCG ATTTA CGCGGG TTTTTAACTGGCGGA Acid345_3701 4376992 - 4376429 - | YceI Acid345_3702 4377831 - 4377238 - | hypothetical protein Acid345_3703 4378165 - 4377914 - | hypothetical protein TERM 3307 4377989 - 4377953 - G 75 -10.2 -3.7282 | gap 1 CCACTGCATGAACAA TCCGAGTTGGGCCGC TGTCCAAT ACGGCCCA-CCCGGA GGCATGGTGGGAGGC TERM 3308 4378028 - 4378046 + g 76 -11.8 -3.33261 | overlap 4378022 GTGCGGCGAGAGCGT CGCAAACA CTC TGTTTGCG TTGTCCGGATTCGAC Acid345_3704 4379078 - 4378323 - | hypothetical protein Acid345_3705 4379633 - 4379166 - | hypothetical protein Acid345_3706 4380377 - 4379715 - | hypothetical protein Acid345_3707 4381007 - 4380426 - | hypothetical protein TERM 3309 4380473 - 4380504 + g 100 -4.4 -5.96219 | opp_overlap 4380464 4380462 CATACAGCCAGTCGG TTGACTGCGCTG GGACATGG CAGCCCAGGCAA TTTTTTTTGTAGCTG TERM 3310 4380722 - 4380735 + g 86 -5.9 -5.1101 | CGAGTACAGTTCCAT CGGCG AACT TGCCG TTTTTTCGGTAATAC TERM 3311 4381521 - 4381505 - R 90 -5.1 -5.28176 | GCGAGGGATAAAAAA GATGACG AAG CGTGATC GAAAAAGACACATGG Acid345_3708 4382878 - 4381796 - | transaldolase Acid345_3709 4383147 - 4383782 + | 6-phosphogluconate dehydrogenase (decarboxylating) Acid345_3710 4384090 - 4384734 + | ECF subfamily RNA polymerase sigma-24 factor Acid345_3711 4384996 - 4386909 + | LuxR family transcriptional regulator TERM 3312 4387262 - 4387232 - g 70 -3.8 -4.67038 | opp_overlap 4387235, overlap 4387234 4387252 CTGTGAAAAGGAAAA CCGGGCGCTGGTGA AAC TGATCAGCGCCTTG GCTGACTCGCCGAGT TERM 3313 4389293 - 4389277 - g 78 -10.9 -3.78775 | opp_overlap 4389277 CGGTCGAGTATCAAA CGGCAAA CGC TTTGCCG TTTGTATGGGCGGAT TERM 3314 4389277 - 4389293 + G 85 -10.9 -4.03413 | opp_overlap 4389277 CGGTCGAGTATCAAA CGGCAAA CGC TTTGCCG TTTGTATGGGCGGAT Acid345_3712 4387092 - 4389647 + | multi-sensor signal transduction histidine kinase Acid345_3713 4389644 - 4390270 + | two component LuxR family transcriptional regulator Acid345_3714 4390374 - 4391144 + | response regulator receiver protein TERM 3315 4392463 - 4392449 - g 77 -2.7 -5.13343 | overlap 4392450 TAAGTGAAAAGAAAA GGGCC GAGGA GGCCT TCAGGCATCTCGTAG TERM 3316 4392547 - 4392561 + G 70 -4.9 -4.46835 | opp_overlap 4392533 ATGGCGCAAGCGTTG CGCGC CCGTT GTGCG TTTGTTTCAACTTGT TERM 3317 4393057 - 4393042 - g 80 -4.6 -4.93877 | GCCCACGAAATAAAA CAGCCG ATTT CAGCCG CGATGACAGATGCCA Acid345_3715 4391470 - 4393689 + | multi-sensor signal transduction histidine kinase Acid345_3716 4394826 - 4393852 - | hypothetical protein TERM 3318 4394685 - 4394695 + g 72 -5.4 -4.55295 | CCTCTGTGAACAGCG GTTC GAT GAAC TTTCTTTGTCCGACA Acid345_3717 4395375 - 4394830 - | Ferritin and Dps TERM 3319 4396052 - 4396100 + r 80 -11.8 -3.35679 | gap 2, overlap 4396056 CCACGAGATTGCATT CGAGGGATGGCCGTGGAACCAGCG CTT CGTTGC--CCACGCCCATCCTTCG TTCTCAGTGGACGCG Acid345_3718 4396664 - 4396104 - | hypothetical protein Acid345_3719 4397179 - 4396709 - | DoxX TERM 3320 4396790 - 4396778 - G 90 -7.7 -4.87291 | overlap 4396780 TAGCGCAAGTAAAAA TGCAG CCC CTGCA GCTGAGAAGACTGAA Acid345_3720 4398179 - 4397643 - | hypothetical protein Acid345_3721 4399301 - 4398381 - | Alpha/beta hydrolase Acid345_3722 4400276 - 4399359 - | zinc-binding alcohol dehydrogenase Acid345_3723 4401055 - 4400636 - | hypothetical protein Acid345_3724 4401960 - 4401487 - | hypothetical protein Acid345_3725 4402537 - 4403139 + | oxidoreductase, molybdopterin binding Acid345_3726 4403139 - 4403870 + | oxidoreductase FAD-binding region Acid345_3727 4405337 - 4404309 - | Fis family transcriptional regulator TERM 3321 4405038 - 4405049 + g 79 -5.8 -4.72272 | CTGCGCGATCGCTCC GGTG AAAG CACC TTTTTCGTGGCCGAA Acid345_3728 4405724 - 4405371 - | response regulator receiver protein TERM 3322 4405825 - 4405807 - R 74 -6.6 -4.30719 | opp_overlap 4405810 4405821, overlap 4405790 4405803 CCTTTGTATAACAAA CGGCGAAC AAG GCTCGTCG TCTGGAATGACGTTT Acid345_3729 4406472 - 4405843 - | two component LuxR family transcriptional regulator Acid345_3730 4406988 - 4406608 - | DoxX Acid345_3731 4407803 - 4407036 - | ECF subfamily RNA polymerase sigma-24 factor Acid345_3732 4408299 - 4408060 - | hypothetical protein TERM 3323 4408657 - 4408676 + r 71 -4.9 -4.56597 | overlap 4408656 CCTCGAGAGTTCCAC GCGCCCT CTGCCA AGCGCGC TTTTTGGAGCGCAGA Acid345_3733 4409983 - 4408790 - | major facilitator transporter TERM 3324 4409979 - 4409953 - G 70 -3.6 -4.56597 | overlap 4409968 GCGGTGTCCGAAAAA CGCTCCACGC ATACACG GCACCGAGCG CCATCTGAATAGCGA Acid345_3734 4410067 - 4410723 + | response regulator receiver protein Acid345_3735 4411632 - 4410943 - | peptide methionine sulfoxide reductase TERM 3325 4411288 - 4411276 - G 85 -3.3 -5.47218 | overlap 4411279 GGCGACGGAAAAAAA GATGC GCA GCAAC TGGCCGTAAGTGATT TERM 3326 4411468 - 4411443 - G 72 -4.7 -4.57569 | gap 1, overlap 4411463 TCACCCTTTCAAAAA CGGCCTGCGTTC CCC AAAAGCAG-CCG CCGGCGAATACTGCT Acid345_3736 4412162 - 4412617 + | protein-methionine-S-oxide reductase Acid345_3737 4412622 - 4413149 + | methionine sulfoxide reductase A TERM 3327 4413223 - 4413252 + T 79 -3 -5.24531 | gap 1, opp_overlap 4413223 TATATCCCAAACAGA GTTCGCGCATA CAAGCCGCT TAT-CGCGAAC TTTTTTATAGGAGAT Acid345_3738 4414595 - 4413837 - | short-chain dehydrogenase/reductase SDR Acid345_3740 4415478 - 4415224 - | hypothetical protein Acid345_3741 4416106 - 4415492 - | Ferritin and Dps TERM 3328 4415885 - 4415902 + g 74 -7 -4.39998 | ATAGAACGTTGGGCC TGCCAC CTGCCA GTGGCA TTTCTTATATAGATC TERM 3329 4416022 - 4416040 + g 76 -4.4 -4.7373 | overlap 4416023 TGATTGCCGATCCGT ACGGCTGA ATC TCCGCCGC TTTTTGGTGAAGTCG Acid345_3742 4417089 - 4416133 - | Zn-dependent hydrolases Acid345_3743 4417463 - 4418365 + | Alpha/beta hydrolase TERM 3330 4418622 - 4418632 + G 83 -8.2 -4.60487 | TCCAGCACCGCGGCG GCCC GAA GGGC TTTTTGAAAGTGATC Acid345_3744 4418411 - 4419088 + | pyridoxamine 5'-phosphate oxidase-related, FMN-binding Acid345_3745 4419069 - 4419911 + | Alpha/beta hydrolase Acid345_3746 4419949 - 4420458 + | cytochrome c' TERM 3331 4420968 - 4420955 - g 70 -3.8 -4.58663 | opp_overlap 4420955 ACCAGCCGGTAAAAA CACG TGATTT CGTG TTCACTCGGTATGCA Acid345_3747 4420498 - 4420989 + | putative cytochrome P460 Acid345_3748 4421127 - 4421762 + | two component LuxR family transcriptional regulator TERM 3332 4421806 - 4421786 - f 77 -11.1 -3.53012 | TCGCCCTGTTGGAAA CCACAGGTG AAC CGCCTGTGG ATCCTGGTAGTCCGT TERM 3333 4421975 - 4421965 - f 75 -6.8 -4.4891 | CCGAGCAGCACAAAA CCGA ACA TCGG CCGAATTGAGGGCAG Acid345_3749 4421992 - 4425048 + | putative signal transduction histidine kinase Acid345_3750 4425167 - 4426306 + | Fis family transcriptional regulator TERM 3334 4426643 - 4426673 + T 95 -14 -3.1855 | overlap 4426668 ACCATGATGACTCGT TCAGTCTCCCCGTT ACC AGCGGGGAGGCGGA TTGCCTATTCAGGAC Acid345_3751 4427763 - 4426717 - | transposase IS116/IS110/IS902 TERM 3335 4427194 - 4427223 + g 85 -15.1 -3.14211 | CAGCCGCTCGATCTC CTGATGCAGTTGC ACGC GCAACCGCATCAG TTCGTCGCGCCGCAT TERM 3336 4427998 - 4427957 - R 74 -6.8 -4.3014 | opp_overlap 4427961, overlap 4427961 ATATATGTACGAAAA TGA-ATCCCGGTGGGCTATC GTGA AATAGCCC-CCAAGATTTCA CCCGCCCCCCCAAGC Acid345_3752 4430540 - 4428141 - | primase P4-like protein Acid345_3753 4433040 - 4431985 - | 5-methylcytosine-specific restriction enzyme subunit McrC Acid345_3754 4435460 - 4433043 - | ATPase TERM 3337 4433206 - 4433217 + g 85 -2.2 -5.52986 | gap 1, overlap 4433206 TGCCCGATCCGATAT CC-CG GGC CGAGG TTTTTTTCGTCGCCT TERM 3338 4433668 - 4433640 - G 88 -5.3 -5.1925 | overlap 4433641 4433662 4433663 GCAGAATTGAAAAAA GTGTCCATTTCGA AGC TCAAAATGGCCAT CGTCACTCGGACGAT TERM 3339 4434839 - 4434828 - G 74 -7.2 -4.3208 | opp_overlap 4434827 4434828, overlap 4434829 GCCGATAACCCAAAA GCGC GTGG GCGC ATCTTTCTTTCCGGA Acid345_3755 4438724 - 4435635 - | HsdR family type I site-specific deoxyribonuclease Acid345_3756 4439380 - 4438721 - | hypothetical protein Acid345_3757 4440687 - 4439377 - | restriction modification system S subunit Acid345_3758 4442209 - 4440674 - | N-6 DNA methylase TERM 3340 4441670 - 4441691 + g 70 -2.1 -4.74103 | overlap 4441668 TCGAACGACGTGAGA GGGCGTATA GAAC TGCCCGCCC TTTTTACCTTCAGCG Acid345_3759 4443150 - 4442335 - | hypothetical protein TERM 3341 4442613 - 4442591 - G 74 -7.6 -4.16943 | overlap 4442592 4442603 CCGTACACCGTAAAA CGCCACAAGG TAG CCTCGGGGCA GTCCGTGGCCTGAGA TERM 3342 4443227 - 4443207 - g 72 -6.1 -4.4078 | GTTGCTGAAGTAAAA TGGAGCTCT ACG AAAGCGCCA TGCCGAAGATGATCA Acid345_3760 4443206 - 4443784 + | hypothetical protein TERM 3343 4444046 - 4444059 + F 77 -8.1 -4.1822 | CCTGAGCGCTTGACG TGCGC CTTG GCGCA TTTGTTACGATGAAG Acid345_3761 4444125 - 4445795 + | hypothetical protein Acid345_3762 4447154 - 4446015 - | phage integrase Acid345_3763 4447447 - 4447151 - | hypothetical protein TERM 3344 4447545 - 4447516 - R 73 -5.8 -4.43501 | gap 1, opp_overlap 4447523, overlap 4447523 AATTCAGTGACAAAA TACGAAACCCGCG ATTTA CGCGGGTTTT-TA ACTGGCGGAGAGGGT TERM 3345 4447523 - 4447539 + r 95 -10.8 -4.65895 | opp_overlap 4447523 4447516 TGACAAAATACGAAA CCCGCG ATTTA CGCGGG TTTTTAACTGGCGGA TERM 3346 4447539 - 4447523 - R 86 -10.8 -4.10958 | opp_overlap 4447523, overlap 4447516 TGACAAAATACGAAA CCCGCG ATTTA CGCGGG TTTTTAACTGGCGGA TERM 3347 4447610 - 4447594 - R 74 -10.9 -3.53563 | AGAGTTTCCCCTAAA CACGCTT TCC AAGCGTG CGCCTTCAGCCACTC TERM 3348 4447677 - 4447654 - R 100 -14.6 -4.74103 | CTGGGAAGCGAAAAA CACCGGAAGC GGGC GCTTCCGGCG GGCTAATCTCAATTG Acid345_3764 4448194 - 4447709 - | bacterioferritin TERM 3349 4448233 - 4448251 + r 70 -8.8 -3.64703 | opp_overlap 4448233 GCAAAATGGGTGAAA GGCGAGTT TAC ACCTCGCC TTTCGATGGAAAAAC Acid345_3765 4449115 - 4448282 - | two component LuxR family transcriptional regulator TERM 3350 4448545 - 4448571 + g 75 -10.8 -3.69836 | CGATGTCCTTGTTCT TCATCCCCTGCG TAA CGCCGGCGATGA TTTGCAGTTCCTTCT Acid345_3766 4451013 - 4449616 - | peptidase U62, modulator of DNA gyrase TERM 3351 4450379 - 4450431 + g 79 -6.9 -4.63527 | gap 1, opp_overlap 4450363, overlap 4450404 CTGGCCTTCTCGGCA GCGATCTCAGCGAGCTTCG-CGGC ATCGAA GTCGTCGGCGTTCGTCGAGTTCGC TTTTTGCCATCCTGA Acid345_3767 4452481 - 4451015 - | peptidase U62, modulator of DNA gyrase TERM 3352 4452439 - 4452412 - G 75 -12 -3.28712 | gap 1, opp_overlap 4452411, overlap 4452426 4452427 CGCGTTCGTCCACAA CGCGG-ACCTCAC AAT GCGAGGCGCCGCG AATCTTTGCAGTTTC Acid345_3768 4452655 - 4453554 + | TPR repeat-containing protein TERM 3353 4453753 - 4453725 - T 83 -11.8 -3.65827 | opp_overlap 4453730, overlap 4453730 GAAGTTTCAGCGAAA GAAAAGCAGCGC TGGCC GCGCTGCTTTTT CATTTCCATCACACC TERM 3354 4453748 - 4453730 - T 100 -11.7 -4.90778 | opp_overlap 4453730, overlap 4453725 TTCAGCGAAAGAAAA GCAGCGC TGGCC GCGCTGC TTTTTCATTTCCATC TERM 3355 4453730 - 4453748 + T 100 -11.7 -5.00138 | opp_overlap 4453730 4453725 TTCAGCGAAAGAAAA GCAGCGC TGGCC GCGCTGC TTTTTCATTTCCATC Acid345_3769 4454428 - 4453772 - | phosphatase kdsC TERM 3356 4454617 - 4454600 - H 70 -9.9 -3.32963 | ATGGCGACCGCAGAA TCCGCAT ACCG ATGCGGA TTCGGAGTGGAGCTA TERM 3357 4455772 - 4455758 - g 70 -4.2 -4.63218 | TCTGGGCGAAGAAAA TGTTGC AGC GCACCA CGGCAGCCTATCGCG TERM 3358 4457357 - 4457310 - g 72 -8.4 -3.80516 | opp_overlap 4457316, overlap 4457315 AAGGAAGTGATGAAA GACACCTTGCACGAAGCCATGG ACCT CGATGGCCTCATGCAATTGGTC AGCAATCTGCGAGAT Acid345_3770 4454853 - 4459160 + | DEAD/DEAH box helicase-like Acid345_3771 4459411 - 4459935 + | ErfK/YbiS/YcfS/YnhG Acid345_3772 4460021 - 4460566 + | hypothetical protein TERM 3359 4460587 - 4460611 + T 93 -11.4 -4.44608 | opp_overlap 4460584 4460575, overlap 4460584 4460589 AAAGCGAAATATCTG TAGCCTGCGC CAAAA GCGCAGGCTC TTCTTTTTAGCTGGC TERM 3360 4460589 - 4460609 + T 100 -14 -3.82353 | opp_overlap 4460584 4460575, overlap 4460587 4460584 AGCGAAATATCTGTA GCCTGCGC CAAAA GCGCAGGC TCTTCTTTTTAGCTG Acid345_3773 4460878 - 4460618 - | hypothetical protein Acid345_3774 4463436 - 4460995 - | replication restart DNA helicase PriA TERM 3361 4463010 - 4463037 + g 74 -6.4 -4.41348 | gap 1, overlap 4463012 4463015 4463016 GGTGGTTGAGCACGG CATACTCGAGCAT CTG ATGCTCG-GTATC TTTCTTTGCGCGAAG TERM 3362 4463012 - 4463035 + g 72 -9 -3.81557 | gap 1, overlap 4463010 4463015 4463016 TGGTTGAGCACGGCA TACTCGAGCAT CTG ATGCTCG-GTA TCTTTCTTTGCGCGA Acid345_3775 4464263 - 4463442 - | phage SPO1 DNA polymerase-related protein Acid345_3776 4465501 - 4464263 - | phosphopantothenoylcysteine decarboxylase / phosphopantothenate-cysteine ligase Acid345_3777 4465800 - 4465567 - | DNA-directed RNA polymerase, omega subunit Acid345_3778 4466515 - 4465814 - | guanylate kinase TERM 3363 4466181 - 4466164 - G 74 -2.7 -4.91109 | gap 1, opp_overlap 4466170 GTGGCAGGATAAAAA TGCC-GAC TGC ATCTGGCA GTTTGACCTTGAGTT Acid345_3779 4466918 - 4466565 - | hypothetical protein TERM 3364 4466939 - 4466958 + r 71 -6.4 -4.34402 | GTTCTGCACCTGTTC GCGCGATT TCTC AATCTCGC TTTTCATCTGCAGGC Acid345_3780 4467805 - 4466915 - | hypothetical protein TERM 3365 4467044 - 4467071 + g 70 -4.3 -4.57569 | gap 1, opp_overlap 4467067 GGTGTTTGATTCGCG GTTC-ATTTCCT GCAGG AGGAAATCGAGC TTTTTGCCCGCCTCA Acid345_3781 4469690 - 4467810 - | ABC transporter, ATPase subunit Acid345_3782 4470684 - 4469761 - | hypothetical protein TERM 3366 4471035 - 4471046 + H 71 -7.2 -4.0616 | overlap 4471027 GCATTGGTGGAGGCC GCGG CACT CCGC TTTGTCCTTCGCGTA Acid345_3783 4471500 - 4471976 + | DMT family permease Acid345_3784 4472663 - 4471995 - | protein of unknown function DUF861, cupin_3 TERM 3367 4472528 - 4472504 - G 75 -5.7 -4.56978 | CCTGGAAATAACAAA CCGTGTCAC GTTCGGA GTGAAACGG ACCCGACCTCAACTC Acid345_3785 4473457 - 4472660 - | macrolide glycosyltransferase-like Acid345_3786 4473962 - 4473429 - | macrolide glycosyltransferase-like Acid345_3787 4474761 - 4474045 - | HAD family hydrolase Acid345_3788 4475174 - 4475845 + | bifunctional ADP-heptose synthase Acid345_3789 4476427 - 4475867 - | hypothetical protein Acid345_3790 4477026 - 4476424 - | phosphoheptose isomerase Acid345_3791 4478345 - 4477059 - | glycosyl transferase, group 1 Acid345_3792 4479640 - 4478351 - | GDP-mannose 6-dehydrogenase Acid345_3793 4481531 - 4479648 - | heparinase II/III-like Acid345_3794 4483692 - 4481533 - | zinc-binding alcohol dehydrogenase TERM 3368 4482892 - 4482860 - G 75 -5.6 -4.56597 | TCCTTCTCGTAAAAA GGGCTGC-GCGGGA TATCCAT TCCCACTGC-GCCC ACTACTACCACTTTC Acid345_3795 4485136 - 4483709 - | CapK protein, putative Acid345_3796 4486686 - 4485133 - | hypothetical protein TERM 3369 4485717 - 4485736 + g 83 -4.9 -5.13722 | overlap 4485712 AGCTCTTCGCCTTGA GCACGAG TGAGTT CTCGAGC TTTTGTTTTGATGAG Acid345_3797 4488151 - 4486736 - | hypothetical protein Acid345_3798 4489522 - 4488173 - | hypothetical protein TERM 3370 4488396 - 4488379 - G 75 -9.9 -3.84246 | TTCCGAATGAGTAAA TGGTCAG AAGG CTGACCA ATGCAAAAGCTGCAT TERM 3371 4488872 - 4488845 - G 74 -7.7 -4.15044 | gap 1, opp_overlap 4488849, overlap 4488847 CTGGTTTGCAACAAA CAGATCGCGCGC CAAAT GC-CGCGATCGG TTCCAGACCTCTCCC Acid345_3799 4490194 - 4489532 - | hypothetical protein Acid345_3800 4491641 - 4490244 - | hypothetical protein Acid345_3801 4492809 - 4491655 - | hypothetical protein TERM 3372 4492634 - 4492650 + g 75 -5.7 -4.56597 | opp_overlap 4492632, overlap 4492629 4492627 4492624 4492646 ATAGGGGAGAGCAGC CGGTGCG GCG TGCTCCG TTTTTGGGAGAACCC TERM 3373 4492925 - 4492876 - R 83 -7.3 -4.63932 | gap 1 TATTTTTGAAGAAAA GCGGGCAAGTTCAAAGAACTTC CGAAGGC GAACTTTTTTGCACT-GCCCGC GGAAACCTTCTCGAA Acid345_3802 4494071 - 4492860 - | glycosyl transferase family protein Acid345_3803 4495105 - 4494071 - | polysaccharide export protein Acid345_3804 4497432 - 4495108 - | protein-tyrosine kinase Acid345_3805 4498578 - 4497634 - | NAD-dependent epimerase/dehydratase Acid345_3806 4500093 - 4498657 - | UDP-glucose 6-dehydrogenase TERM 3374 4499119 - 4499084 - G 80 -10.5 -4.07568 | gap 1 GTGCCGCCCTTAAAA GCTGCGC-CCAAGACC GCAAG AGTCTTGCCGCGCAGC GTCCATACCGCTGAG Acid345_3807 4501596 - 4500115 - | undecaprenyl-phosphate galactosephosphotransferase TERM 3375 4500428 - 4500416 - G 71 -6.9 -4.15044 | GTGCGCCGCAAGAAA CGCCC AAT GAGCG TGATGCGCGGATCTT TERM 3376 4501821 - 4501831 + H 74 -2.4 -5.00616 | overlap 4501820 TGTGTTCAAAGTACC GCGC CTC GCCC TTTTTTACAACGCAA TERM 3377 4502023 - 4502013 - H 70 -6.8 -4.20084 | opp_overlap 4502012 ACCAGCCACTCAAAA TGGG GAT CCCA GTCGTTTCACATGGC Acid345_3808 4502223 - 4503908 + | hypothetical protein TERM 3378 4504422 - 4504412 - g 80 -4.6 -5.01811 | CCAGCAAATCAAAAA CCCG GTG CGGA GAAAGCAATCGGCCT TERM 3379 4504446 - 4504427 - g 72 -8.6 -3.85698 | gap 1, overlap 4504431 CCCGGTGCGGAGAAA GCAATCGGC CTC GCCGA-TGC CAAAGCCCATTCTCT Acid345_3809 4503926 - 4504501 + | D-alpha,beta-D-heptose 1,7-bisphosphate phosphatase Acid345_3810 4506226 - 4504766 - | D-beta-D-heptose 1-phosphate adenylyltransferase / D-alpha,beta-D-heptose 7-phosphate 1-kinase Acid345_3811 4506256 - 4506528 + | hypothetical protein Acid345_3812 4507706 - 4506702 - | ADP-glyceromanno-heptose 6-epimerase precursor Acid345_3813 4508815 - 4507820 - | NAD-dependent epimerase/dehydratase Acid345_3814 4509890 - 4508808 - | GDP-mannose 4,6-dehydratase TERM 3380 4510232 - 4510202 - R 88 -13.3 -3.34013 | opp_overlap 4510199 4510192 4510191 TAGGGTGTTAAGGAA GCTCGCGCCCC GTTCACATT AGGGCGCGAGC TCATCCGTTGACAGT Acid345_3815 4510994 - 4510311 - | hypothetical protein Acid345_3816 4513011 - 4511074 - | polysaccharide biosynthesis protein CapD Acid345_3817 4514361 - 4513378 - | hypothetical protein Acid345_3818 4515550 - 4514348 - | DegT/DnrJ/EryC1/StrS aminotransferase Acid345_3819 4516313 - 4515558 - | haloacid dehalogenase-like hydrolase Acid345_3820 4517326 - 4516295 - | putative carbamoyl phosphate synthase large subunit TERM 3381 4517193 - 4517208 + g 70 -11.8 -2.71712 | opp_overlap 4517185, overlap 4517192 GCCAATACACGCCAT CCGCGC CCCT GCGCGG CTTTCACGAACGAGC Acid345_3821 4517951 - 4517331 - | undecaprenyl-phosphate galactosephosphotransferase Acid345_3822 4519287 - 4518100 - | hypothetical protein Acid345_3823 4520369 - 4519284 - | glycosyl transferase, group 1 Acid345_3824 4521639 - 4520419 - | hypothetical protein TERM 3382 4520730 - 4520693 - G 71 -7.7 -4.07687 | overlap 4520659 4520712 4520713 ATTCCCCGTGCAAAA CGCGACTGCAACGCG TAAACCAG CGCATCGTAGTCACG CTGACGTCGCCCCGA Acid345_3825 4522322 - 4521636 - | thymidylate kinase-like Acid345_3826 4523466 - 4522327 - | glycosyl transferase, group 1 Acid345_3827 4525941 - 4523701 - | hypothetical protein Acid345_3828 4526876 - 4525953 - | multiheme cytochrome Acid345_3829 4527254 - 4526955 - | cytochrome c, class I TERM 3383 4527469 - 4527441 - R 100 -9.5 -5.03314 | opp_overlap 4527441 4527442, overlap 4527442 4527443 TTTACGGCCAAAAAA GTCCGGCATTCCA TAG CGGAATGCCGGGA TTATCAGGTAACCGG TERM 3384 4527441 - 4527469 + r 75 -11 -3.32844 | opp_overlap 4527441 4527442 4527443, overlap 4527442 TTTACGGCCAAAAAA GTCCGGCATTCC ATAGC GGAATGCCGGGA TTATCAGGTAACCGG TERM 3385 4527468 - 4527442 - R 85 -13 -3.61506 | opp_overlap 4527441 4527442, overlap 4527441 4527443 TTACGGCCAAAAAAG TCCGGCATTCCA TAG CGGAATGCCGGG ATTATCAGGTAACCG TERM 3386 4527442 - 4527468 + r 81 -14.5 -2.59564 | opp_overlap 4527442 4527441 4527443, overlap 4527441 TTACGGCCAAAAAAG TCCGGCATTCC ATAGC GGAATGCCGGG ATTATCAGGTAACCG TERM 3387 4527467 - 4527443 - R 90 -16.5 -2.76422 | opp_overlap 4527442 4527441, overlap 4527442 4527441 TACGGCCAAAAAAGT CCGGCATTCCA TAG CGGAATGCCGG GATTATCAGGTAACC Acid345_3830 4529490 - 4527514 - | beta-lactamase TERM 3388 4529561 - 4529532 - R 100 -15.7 -4.0371 | gap 1, opp_overlap 4529528 4529526 4529523, overlap 4529519 GAGCTGCGAGATAAA CCCGGCGCAGC-CA CAT TGCGCGGCGCCGGG GAGATGCGTTTTGTT Acid345_3831 4533000 - 4529575 - | hypothetical protein TERM 3389 4529623 - 4529665 + g 75 -12.3 -3.31144 | GCGCGGGTTGGACAG CGTCTTCGT-GATGGTTCCAA AAC TTGGA-CCATCGGTGAAGACG TTATCGGGATCGGCG TERM 3390 4533306 - 4533356 + G 72 -6.7 -4.26076 | gap 2, opp_overlap 4533303 4533343, overlap 4533304 4533303 4533310 TTGCTCAATTGAGCC CGCGCCGCCGCGAG-ATT-GTGCGC CCC GCGTTCGAAGACCCGCGGCGGTTCG TTTTGCTCAGCGTCC Acid345_3832 4533224 - 4534108 + | RpiR family transcriptional regulator TERM 3391 4534770 - 4534751 - g 70 -3.6 -4.56597 | gap 1, opp_overlap 4534762, overlap 4534762 TTCTGTCCCGAAAAA CATGAACGA ACT TCGC-CATG CGGATCCTTCGAAAG Acid345_3833 4534137 - 4534913 + | hypothetical protein Acid345_3834 4534939 - 4536051 + | mandelate racemase/muconate lactonizing enzyme Acid345_3835 4537374 - 4536055 - | amino acid transporter TERM 3392 4539031 - 4539070 + G 78 -14.2 -2.66964 | gap 1, overlap 4539057 GGGCGAGATCGCATC CGCTGCATACGCCTCCGCT GGA AGCGG-GGCGCAAGCTGCG TCCTCTGGTGCATCC TERM 3393 4540175 - 4540161 - g 75 -5.7 -4.67755 | overlap 4540165 ACATCGACGGAAAAA CGATC GCGCA GATCG CAGGGATCCAGAAGA Acid345_3836 4537487 - 4540717 + | D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase Acid345_3837 4541889 - 4540735 - | periplasmic senrsor signal transduction histidine kinase Acid345_3838 4542657 - 4541893 - | LytR/AlgR family transcriptional regulator Acid345_3839 4543739 - 4542870 - | TPR repeat-containing protein TERM 3394 4543858 - 4543833 - R 100 -9 -5.18371 | overlap 4543834 GGGCAGAAAAGAAAA GTGGGGAGGA GATAGG TCCTCCCCAG AAGCTTCTGAGCGAT TERM 3395 4543857 - 4543834 - R 86 -12.5 -3.69938 | overlap 4543833 GGCAGAAAAGAAAAG TGGGGAGGA GATAGG TCCTCCCCA GAAGCTTCTGAGCGA TERM 3396 4543890 - 4543861 - R 74 -11.5 -3.28791 | overlap 4543862 AGGTCCTCCCCAGAA GCTTCTGAGCGAT TACG ACCGCTCAGAAGA TGAACTTGAAGACCA TERM 3397 4543889 - 4543862 - R 83 -15 -2.57132 | overlap 4543861 GGTCCTCCCCAGAAG CTTCTGAGCGAT TACG ACCGCTCAGAAG ATGAACTTGAAGACC Acid345_3840 4547251 - 4543883 - | hypothetical protein TERM 3398 4546936 - 4546895 - G 70 -12.3 -2.72344 | gap 1, overlap 4546897 GCCGACTGCCAATGA GACGTTCCGGTCGTTGACCA CAT TGGTCG-CGACCCGCACGTC GCGGACCGCGCTCGT TERM 3399 4547508 - 4547480 - R 100 -13.2 -4.38712 | opp_overlap 4547487, overlap 4547483 CGTACCGGGACAAAA CAAGGGACGGCA TTGTG TGCCGTCCCTTC AGACCTCGCATTGAA TERM 3400 4547505 - 4547483 - R 100 -14.9 -4.31397 | opp_overlap 4547487, overlap 4547480 ACCGGGACAAAACAA GGGACGGCA TTGTG TGCCGTCCC TTCAGACCTCGCATT Acid345_3841 4550903 - 4547532 - | TonB-dependent receptor TERM 3401 4550534 - 4550551 + g 81 -4.1 -5.15969 | CACCGGCGGCCTCCC CGGTC ACATCGAC GACCG TTTTTTCGGTTCCGA Acid345_3842 4551303 - 4551043 - | hypothetical protein Acid345_3843 4553320 - 4551902 - | diguanylate cyclase TERM 3402 4552959 - 4552933 - G 73 -12.2 -3.11316 | overlap 4552936 CGAGCAGTGAACAGA TGAGTGGCGCGA CGA TCGCGCCCCACA GAACGAAGCGGCCCA TERM 3403 4552956 - 4552936 - G 73 -12.5 -2.76322 | overlap 4552933 GCAGTGAACAGATGA GTGGCGCGA CGA TCGCGCCCC ACAGAACGAAGCGGC TERM 3404 4553435 - 4553478 + r 95 -15.1 -3.28924 | overlap 4553469 CCTGATTCGATACTT CCGCTGCCGCGGGCCCCAT GGGCGG ACGGGACCCGCGCCTGCGG TTCTGCCGGACGCTA Acid345_3844 4554018 - 4553491 - | hypothetical protein TERM 3405 4554194 - 4554205 + r 86 -7.2 -4.75174 | overlap 4554178 4554177 CGAAGCCGGGGACCC CGGC GAAC GCCG TTTTTGCGTTCGATG Acid345_3845 4555640 - 4554276 - | periplasmic sensor signal transduction histidine kinase Acid345_3846 4556333 - 4555644 - | two component transcriptional regulator Acid345_3847 4556901 - 4556452 - | hypothetical protein TERM 3406 4556684 - 4556708 + g 73 -12.1 -3.11559 | overlap 4556676 TCCACGCGCTCGGCC TCCGCGCGCTG TAC CAGCGCCTGGA TATTCGGCTTCTCGT TERM 3407 4557015 - 4556998 - R 100 -14.1 -5.67063 | opp_overlap 4556997 GTCAGGACAAAAAAA CGGCGCC CGAA GGCGCCG CTCATTGGGAAAGAA Acid345_3848 4558147 - 4557038 - | phosphoesterase TERM 3408 4558970 - 4558946 - g 71 -10.6 -3.53012 | opp_overlap 4558931, overlap 4558947 CGCGCTTCGCGGAAA CCGCCGGCGC GTTTG GCGCCCGCGA GGAGTATGAAGTCAT TERM 3409 4558969 - 4558947 - g 70 -11.9 -2.71712 | opp_overlap 4558931, overlap 4558946 GCGCTTCGCGGAAAC CGCCGGCGC GTTTG GCGCCCGCG AGGAGTATGAAGTCA Acid345_3849 4558606 - 4559250 + | hypothetical protein TERM 3410 4559279 - 4559309 + F 95 -8.3 -5.08178 | gap 1, opp_overlap 4559282 4559283, overlap 4559282 4559283 CAGAATCAACAAATA AAAG-GGCGACCCG CAAA TGGGTCGCCTCTTG TTTTTCTCTGTCTAT TERM 3411 4559305 - 4559282 - f 100 -9.5 -5.13527 | opp_overlap 4559279 4559282 4559283, overlap 4559283 AATCAACAAATAAAA GGGCGACCC GCAAAT GGGTCGCCT CTTGTTTTTCTCTGT TERM 3412 4559282 - 4559306 + F 91 -10 -4.61353 | gap 1, opp_overlap 4559282 4559283, overlap 4559279 4559283 AATCAACAAATAAAA G-GGCGACCCG CAAA TGGGTCGCCTC TTGTTTTTCTCTGTC TERM 3413 4559283 - 4559304 + F 93 -13.7 -3.89226 | opp_overlap 4559282 4559283, overlap 4559282 4559279 ATCAACAAATAAAAG GGCGACCCG CAAA TGGGTCGCC TCTTGTTTTTCTCTG TERM 3414 4559304 - 4559283 - f 86 -13 -3.65676 | opp_overlap 4559283 4559282 4559279, overlap 4559282 ATCAACAAATAAAAG GGCGACCC GCAAAT GGGTCGCC TCTTGTTTTTCTCTG TERM 3415 4560425 - 4560408 - g 90 -4.7 -5.40072 | TCCGGCCGAAAAAAA GCGGCCG CCGT CATCCGC CACTGGAAGCAAGGG Acid345_3850 4559734 - 4560459 + | ECF subfamily RNA polymerase sigma-24 factor Acid345_3851 4560456 - 4561121 + | putative anti-sigma factor TERM 3416 4561167 - 4561139 - f 100 -14 -3.87373 | gap 1, opp_overlap 4561144, overlap 4561144 TAGATTGGTTATAAA GCAAA-CGCCGGA TGCG TCCGGCGTTTTGC TATGCAAATCCGACA TERM 3417 4561144 - 4561161 + F 100 -12.7 -4.3467 | opp_overlap 4561139 4561144 TGGTTATAAAGCAAA CGCCGGA TGCG TCCGGCG TTTTGCTATGCAAAT TERM 3418 4561161 - 4561144 - f 95 -12.7 -4.13995 | opp_overlap 4561144, overlap 4561139 TGGTTATAAAGCAAA CGCCGGA TGCG TCCGGCG TTTTGCTATGCAAAT TERM 3419 4561293 - 4561275 - f 74 -3.1 -4.90455 | opp_overlap 4561275 4561278, overlap 4561278 ATACACTTATAAAAA GAATCCA CACGC TGGAATC TTCCTATTTGGGGGC TERM 3420 4562461 - 4562434 - g 73 -12.8 -2.8294 | gap 1, overlap 4562431 4562436 TATTCTTCACAAGGA GACGCTGCTCACC ATG GGTGAGCAG-GCC CTGATCAAGGGCGAC TERM 3421 4562459 - 4562436 - g 71 -11.8 -2.96274 | gap 1, overlap 4562434 4562431 TTCTTCACAAGGAGA CGCTGCTCACC ATG GGTGAGCAG-G CCCTGATCAAGGGCG TERM 3422 4562726 - 4562692 - g 83 -9.8 -4.26076 | overlap 4562716 4562719 CGACCTCCAGGAAAA GCGCGACGAAGCCCTG AAA CAGTACAACGCCGCGC TGGCGGAGAACGACA Acid345_3852 4561301 - 4562824 + | TPR repeat-containing protein TERM 3423 4562828 - 4562846 + F 82 -11.6 -3.85817 | opp_overlap 4562812 4562826 4562825, overlap 4562829 CAGGCTCAATAATTC CGCCCGGG ACG CCCGGGCA TTTATCGGAGACGCT TERM 3424 4562829 - 4562845 + F 86 -15.1 -2.91276 | opp_overlap 4562812 4562826 4562825, overlap 4562828 AGGCTCAATAATTCC GCCCGGG ACG CCCGGGC ATTTATCGGAGACGC TERM 3425 4562900 - 4562914 + G 74 -11.4 -3.57144 | TCTCACTTATCGCAA CCGCGA CGT TCGCGG TTTCGCAGTCCCCAG TERM 3426 4563573 - 4563604 + G 70 -5 -4.42806 | gap 1, opp_overlap 4563572, overlap 4563574 TTTCCGCAAAGCTAT TGACGCCAACAAGGC TGA GCCC-GATGGCGTCC TTTATTTGCGCCTCG Acid345_3853 4562863 - 4563795 + | tetratricopeptide region Acid345_3854 4563853 - 4564629 + | ribonuclease III TERM 3427 4564948 - 4564936 - g 73 -3.3 -4.77165 | TGCCGTACAAGAAAA TCCAG CGC CAGGA GATCATCGTCTTTCG Acid345_3855 4564626 - 4565453 + | signal peptidase I Acid345_3856 4565461 - 4566258 + | signal peptidase I Acid345_3857 4566258 - 4568846 + | AsmA Acid345_3858 4568843 - 4569406 + | hypothetical protein TERM 3428 4569854 - 4569864 + G 74 -6.8 -4.32857 | opp_overlap 4569853 GATTCCGGAATCGAT GGAG CCG CTCC TTTATCTTTCCGAAG TERM 3429 4570070 - 4570095 + G 75 -5.5 -4.66318 | gap 1, opp_overlap 4570070 TGGGGTTCTAATCCA TCCGCT-CAATG TCG CATTCCAGCGGA TTTTCTTAACCTAAT Acid345_3859 4569465 - 4570109 + | peptidase M50 Acid345_3860 4570109 - 4571188 + | tryptophanyl-tRNA synthetase Acid345_3861 4571192 - 4572040 + | condensin subunit ScpA TERM 3430 4572676 - 4572657 - g 74 -11.4 -3.53012 | opp_overlap 4572657 CGCGCGGCCTTGAAA TCCGCCAG ATTG CCGGCGGA TATCGTATGGCGACC Acid345_3862 4572245 - 4573306 + | condensin subunit ScpB TERM 3431 4574151 - 4574131 - g 84 -7.5 -4.72272 | opp_overlap 4574118 4574147, overlap 4574132 4574146 4574147 GCGCGCGACGAAAAA CCGCGCTTC GCT AAAGCGCGT GGCGAACGCCCCGCG TERM 3432 4574150 - 4574132 - g 73 -11 -3.43042 | opp_overlap 4574118 4574147, overlap 4574131 4574146 4574147 CGCGCGACGAAAAAC CGCGCTTC GCT AAAGCGCG TGGCGAACGCCCCGC TERM 3433 4574147 - 4574166 + G 71 -10.6 -3.53012 | opp_overlap 4574132 4574131 4574146 4574147 CGCGCTTCGCTAAAG CGCGTGGC GAAC GCCCCGCG TTTGGCCGCGGGCGC TERM 3434 4574345 - 4574302 - g 72 -9.7 -3.68341 | gap 3 AAGCGCATGGAAGAA GCACCGCGG--GAACGTCGCGA GCG TC-CGAAGTTCGACCGCGGCGC GCGCCCGGCATTCCG TERM 3435 4574958 - 4574972 + G 72 -9.2 -3.64703 | opp_overlap 4574942 4574956 4574958, overlap 4574943 CGGTCCACGCAAAGA GGGCGG AGA CCGTCC TTTCCGTGGCAAACC Acid345_3863 4573312 - 4575354 + | pseudouridine synthase, Rsu TERM 3436 4575490 - 4575458 - g 87 -15 -3.26204 | gap 1, overlap 4575450 AATCAAATGCACCAA GATGGCCTCGAACGA GAAC CCGTTCG-GGCCATC GCCGCGTGCGCTGGA Acid345_3864 4575351 - 4576475 + | aminotransferase TERM 3437 4576577 - 4576566 - T 78 -2.2 -5.24989 | overlap 4576574 TGACAGATTAAAAAA CTAC AAAA GCAG AATGGCCGCCCGCAG TERM 3438 4576604 - 4576574 - T 90 -8.2 -4.76171 | opp_overlap 4576580, overlap 4576566 4576580 TAAAAAACTACAAAA GCAGAATGGCCGCC CGC AGCGGCCATTTCGT TTGGATCGCGATTTA TERM 3439 4576598 - 4576580 - T 83 -12.4 -3.73008 | opp_overlap 4576580, overlap 4576574 ACTACAAAAGCAGAA TGGCCGCC CGC AGCGGCCA TTTCGTTTGGATCGC TERM 3440 4576580 - 4576598 + T 91 -11.7 -4.08485 | opp_overlap 4576574 4576580 ACTACAAAAGCAGAA TGGCCGC CCGCA GCGGCCA TTTCGTTTGGATCGC Acid345_3865 4577660 - 4576617 - | glucokinase TERM 3441 4577052 - 4577108 + g 71 -10.8 -3.61398 | overlap 4577054 4577055 GGCGAGCGCGTCGGA CAGGCCGTTGGCGACAGCT-TCGCGCGC CAT GCGCACGACGGCCGTCGCCGA-GGCATA TTGTTCGAGGCAGCC TERM 3442 4577054 - 4577106 + g 83 -13.4 -3.38812 | overlap 4577052 4577055 CGAGCGCGTCGGACA GGCCGTTGGCGACAGCT-TCGCGCGC CAT GCGCACGACGGCCGTCGCCGA-GGCA TATTGTTCGAGGCAG TERM 3443 4577055 - 4577105 + g 85 -16.9 -2.63073 | overlap 4577054 4577052 GAGCGCGTCGGACAG GCCGTTGGCGACAGCT-TCGCGCGC CAT GCGCACGACGGCCGTCGCCGA-GGC ATATTGTTCGAGGCA Acid345_3866 4578565 - 4577747 - | formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase TERM 3444 4578910 - 4578927 + G 70 -4.1 -4.6575 | gap 1, overlap 4578894 4578914 GTTGATCCGATGGCT GCATCTGC TCG GCGG-TGC TTTTGTGCTTTATCT Acid345_3867 4578698 - 4579309 + | lysine exporter protein LysE/YggA TERM 3445 4579613 - 4579630 + F 80 -9.9 -3.96148 | GGTTCTTTAAGCGGG GCTTCTG TGTG CAGAAGC TTTCTGATCCGCGCG Acid345_3868 4579716 - 4581044 + | adenylosuccinate synthetase TERM 3446 4581332 - 4581314 - g 71 -8.1 -3.95674 | opp_overlap 4581326 4581329 AAAATCGTGAAAGAA GACCTGC ACCTG GCAGGCC GTCGTACGGACGCTT Acid345_3869 4581083 - 4581370 + | antibiotic biosynthesis monooxygenase TERM 3447 4581917 - 4581934 + G 74 -11.3 -3.61398 | CCGGAGATCCTCGAC GGCGAGT GGTC ACTCGCC TTCTTCGGCGGCGAG Acid345_3870 4581377 - 4582234 + | hypothetical protein Acid345_3871 4582821 - 4582231 - | TPR repeat-containing protein Acid345_3872 4583020 - 4582823 - | 4-oxalocrotonate tautomerase TERM 3448 4583065 - 4583037 - R 100 -11.7 -5.00884 | opp_overlap 4583038 4583052 4583061, overlap 4583039 ACGGTCTCCAAAAAA CACAGGCATGCCG TCG CAGCATGCCTGCT CGCTTGTCGCGTGAA TERM 3449 4583063 - 4583039 - R 100 -16.5 -4.13561 | opp_overlap 4583038 4583052 4583061, overlap 4583037 GGTCTCCAAAAAACA CAGGCATGCCG TCG CAGCATGCCTG CTCGCTTGTCGCGTG Acid345_3873 4583510 - 4583085 - | nucleoside diphosphate kinase Acid345_3874 4584414 - 4583533 - | succinyl-CoA synthetase (ADP-forming) alpha subunit TERM 3450 4583716 - 4583734 + g 75 -10.3 -3.76839 | opp_overlap 4583719, overlap 4583719 GGTTTGGCCGGCGAT GAAGCCG ACGAC CGGCTTC TTTACGTTGGCCTTC Acid345_3875 4585593 - 4584415 - | succinyl-CoA synthetase (ADP-forming) beta subunit Acid345_3876 4585733 - 4586140 + | hypothetical protein Acid345_3877 4586148 - 4586822 + | MOSC Acid345_3878 4587700 - 4586915 - | TonB-like protein TERM 3451 4587888 - 4587868 - H 71 -11.1 -2.88544 | opp_overlap 4587868 CTGGATCGTCATATA GCCCCGG GTGACTA CCGGGGC TTTGGTTTGCCAGTT TERM 3452 4587868 - 4587888 + H 85 -11.1 -4.06903 | opp_overlap 4587868 CTGGATCGTCATATA GCCCCGG GTGACTA CCGGGGC TTTGGTTTGCCAGTT Acid345_3879 4588023 - 4588421 + | hypothetical protein Acid345_3880 4589377 - 4588484 - | beta-lactamase-like Acid345_3881 4590122 - 4589457 - | O-methyltransferase family protein TERM 3453 4590472 - 4590491 + r 72 -12.1 -2.71447 | opp_overlap 4590472, overlap 4590469 GAAGGAAATAGAAAA GCCCCGG CACAAA CCGGGGC TGATGTGTGGTGGCT TERM 3454 4590491 - 4590472 - R 100 -12.8 -4.84539 | opp_overlap 4590472 4590469 GAAGGAAATAGAAAA GCCCCGGC ACAA ACCGGGGC TGATGTGTGGTGGCT Acid345_3882 4591536 - 4590514 - | peptidase M48, Ste24p TERM 3455 4590598 - 4590640 + g 71 -10.5 -3.59979 | gap 1, overlap 4590597 4590611 GTTGTTGGATTGCGT CGCGTTGTTCGTCGGCGCGG TGGT CTGCGCTGGCGTG-GACGCG TTTGCGCTGGCCGCC TERM 3456 4590923 - 4590937 + g 78 -4.2 -4.87786 | overlap 4590919 4590925 TAACCGGCGCCGGCA GCGAAC TGC GTTCCC TTTTTGTCCGCTTCG Acid345_3883 4591951 - 4591541 - | hypothetical protein Acid345_3884 4593973 - 4591970 - | adenylate/guanylate cyclase TERM 3457 4594243 - 4594279 + G 71 -11.4 -3.21099 | GGTGGATGAGATTGT CGGCTTCGCGGAGGCG ATCCG TGCGGCCGCGACGCCG TTGATCGTGCGCGAC Acid345_3885 4594076 - 4595119 + | anthranilate phosphoribosyltransferase TERM 3458 4595151 - 4595165 + F 72 -11.4 -3.06183 | GGGTCCTTCGACTGC GCGTGC TTC GCACGC TTCGCTCAGGATGAC Acid345_3886 4595272 - 4596795 + | levanase TERM 3459 4597981 - 4597992 + G 70 -2.2 -4.86731 | TAGCGATTGCGGGTG GTCT GGTG GGAC TTTTGTTTGCGCAGG TERM 3460 4598003 - 4598022 + G 71 -7.2 -4.22927 | gap 1 GGGACTTTTGTTTGC GCAGGT-AG GAA CTCACCTGC TTTCTATCTTCCTGG Acid345_3887 4596966 - 4599389 + | ABC efflux pump, inner membrane subunit TERM 3461 4599437 - 4599411 - T 100 -11.5 -4.70659 | opp_overlap 4599412 4599433, overlap 4599412 GCCCAGACGCAAAAA TGCCCCGCGAA ATGAA CTCGCGGGGCT TCTCGGAAATCCTTA TERM 3462 4599436 - 4599412 - T 95 -15 -3.41913 | opp_overlap 4599412 4599433, overlap 4599411 CCCAGACGCAAAAAT GCCCCGCGAA ATGAA CTCGCGGGGC TTCTCGGAAATCCTT TERM 3463 4599412 - 4599436 + T 95 -14.3 -3.30619 | opp_overlap 4599412 4599411, overlap 4599433 CCCAGACGCAAAAAT GCCCCGCGA AATGAAC TCGCGGGGC TTCTCGGAAATCCTT Acid345_3888 4601345 - 4599450 - | peptidase M56, BlaR1 TERM 3464 4599514 - 4599529 + g 75 -5.4 -4.68994 | gap 1, overlap 4599517 GCTTTGACCTTTTTG TCGGCGG CCT CCG-CGA TTTTTCCCTGCTGCT TERM 3465 4599987 - 4600004 + g 73 -3.3 -4.86939 | AAGGAACTTGCCATT GTTAGCC ACGC GGCGAGC TTTTTCAATTTCTTC TERM 3466 4600542 - 4600528 - G 74 -12.8 -2.89793 | overlap 4600525 CCAGTCATAGAACGA CGCGGC ATC GCCGCG AAATGAAGAACGATT Acid345_3889 4601743 - 4601342 - | CopY family transcriptional regulator Acid345_3890 4603287 - 4601857 - | beta-lactamase-like Acid345_3891 4604178 - 4603471 - | hypothetical protein TERM 3467 4604125 - 4604145 + g 77 -2.5 -5.03314 | overlap 4604117 GGGTGGCTCAATGCC GAAATGCTC GGC GAGGATCTC TTTTTTGCGCGTCAG Acid345_3892 4604301 - 4605779 + | GntR family transcriptional regulator TERM 3468 4605764 - 4605792 + T 81 -12.5 -3.09516 | gap 1, opp_overlap 4605751 GATCCGCGAGGTGTT GC-GCGGACGGA GATAAG TCCGTCCGCAGC TTAGCTGATACGCGC Acid345_3893 4606626 - 4605793 - | LytR/AlgR family transcriptional regulator TERM 3469 4606121 - 4606089 - G 86 -14.1 -3.29511 | CGCAGGTTTCGAGAA GCGTGCCGCGTACGC GAT GCGTACCCGATACGC AGTGGAGTTCCAGGT Acid345_3894 4607719 - 4606796 - | DoxX TERM 3470 4607856 - 4607826 - R 100 -5.3 -5.54907 | opp_overlap 4607826 4607827 4607852, overlap 4607827 CGTAGAAAACAAAAA TGGGGAACTCGAG TTATG CAGGAGTTCCCCG TTTAGTAGCGGAGTC TERM 3471 4607855 - 4607827 - R 73 -8.8 -3.91317 | opp_overlap 4607827 4607826 4607852, overlap 4607826 GTAGAAAACAAAAAT GGGGAACTCGAG TTATG CAGGAGTTCCCC GTTTAGTAGCGGAGT Acid345_3895 4611325 - 4607876 - | TonB-dependent receptor Acid345_3896 4611720 - 4612466 + | hypothetical protein Acid345_3897 4613553 - 4612612 - | NmrA-like TERM 3472 4613400 - 4613430 + g 71 -10.4 -3.59979 | overlap 4613401 GGTCCTTTACTTTCT CCGGATGTCGCGCT ATC AGCGTGACATCAGA TTTGCGGTCAAGAAG TERM 3473 4613401 - 4613429 + g 76 -13.9 -2.75844 | overlap 4613400 GTCCTTTACTTTCTC CGGATGTCGCGCT ATC AGCGTGACATCAG ATTTGCGGTCAAGAA Acid345_3898 4613680 - 4613922 + | hypothetical protein Acid345_3899 4613950 - 4614240 + | hypothetical protein Acid345_3900 4614733 - 4614380 - | glyoxalase/bleomycin resistance protein/dioxygenase TERM 3474 4614593 - 4614576 - G 77 -2.5 -5.0538 | opp_overlap 4614576, overlap 4614578 GTGGACTTGAAAAAA CCTCCGC GCAT GCGGCCG TCGTTGAAGCTAATG TERM 3475 4614846 - 4614826 - R 100 -14 -4.79752 | GTGAACAATAGAAAA GCCGCCGT GCGCG ACGGCGGC CCTCACATCAAAAAG Acid345_3901 4615741 - 4614863 - | hypothetical protein Acid345_3902 4617676 - 4616603 - | histone deacetylase superfamily protein Acid345_3903 4617748 - 4618380 + | hypothetical protein TERM 3476 4618687 - 4618674 - g 80 -9.5 -4.19336 | AACGATGCGAACAAA CCCGG AGTT CCGGG AGTCCGTCGTCCGTT Acid345_3904 4618545 - 4620260 + | Sel1 TERM 3477 4620309 - 4620278 - f 72 -12.3 -2.70525 | overlap 4620277 4620273 GCCCTCGAAAGCAAT GCTCACGGTGACG TAAAAT CGCCATCGTGAGC TCCCACGCAATTCTG Acid345_3905 4620304 - 4621659 + | aminotransferase Acid345_3906 4621656 - 4621892 + | hypothetical protein Acid345_3907 4621969 - 4623192 + | hypothetical protein Acid345_3908 4623996 - 4623193 - | DeoR family transcriptional regulator Acid345_3909 4624580 - 4628041 + | TonB-dependent receptor TERM 3478 4628089 - 4628057 - T 71 -9.8 -3.53012 | opp_overlap 4628060 4628061, overlap 4628060 GTTCCTCCCGTGAAA GCACGGCCCGATCC GCAAT GGATCGGGCCATTT TTCTTGTCCTAGATA TERM 3479 4628086 - 4628060 - T 87 -15.9 -2.90496 | opp_overlap 4628060 4628061, overlap 4628057 CCTCCCGTGAAAGCA CGGCCCGATCC GCAAT GGATCGGGCCA TTTTTCTTGTCCTAG TERM 3480 4628060 - 4628086 + T 100 -14.4 -5.22006 | opp_overlap 4628060 4628057, overlap 4628061 CCTCCCGTGAAAGCA CGGCCCGATCCG CAA TGGATCGGGCCA TTTTTCTTGTCCTAG TERM 3481 4628061 - 4628085 + T 100 -17.9 -3.72119 | opp_overlap 4628060 4628057, overlap 4628060 CTCCCGTGAAAGCAC GGCCCGATCCG CAA TGGATCGGGCC ATTTTTCTTGTCCTA Acid345_3910 4628517 - 4628110 - | hypothetical protein Acid345_3911 4628946 - 4628572 - | hypothetical protein Acid345_3912 4629779 - 4628943 - | hypothetical protein Acid345_3913 4629935 - 4630333 + | hypothetical protein TERM 3482 4630377 - 4630358 - T 76 -10.7 -3.67175 | opp_overlap 4630358, overlap 4630354 AGCTCTTAAAACGAA CCCAGCC TATTGC GGCTGGG TTTTGTCTTCTACCT TERM 3483 4630358 - 4630377 + T 100 -10.7 -4.74285 | opp_overlap 4630358 4630354 AGCTCTTAAAACGAA CCCAGCC TATTGC GGCTGGG TTTTGTCTTCTACCT Acid345_3914 4630615 - 4630364 - | hypothetical protein Acid345_3915 4630775 - 4630623 - | hypothetical protein TERM 3484 4631290 - 4631276 - g 71 -7 -4.25104 | CTGTCTTGACGAAAA CGGGGC CCA GCGCCG GATCGAGGCTTCGGG def 4630839 - 4631465 + | peptide deformylase Acid345_3917 4631707 - 4631468 - | hypothetical protein Acid345_3918 4632782 - 4631745 - | homoserine O-acetyltransferase TERM 3485 4632876 - 4632856 - R 100 -11.1 -4.70583 | opp_overlap 4632853 4632856 4632858 GCTACGAATAGAAAA GACGCGCCA ACT CGACGCGTC TCCTATTTTTCCAAC Acid345_3919 4634114 - 4632900 - | 2-amino-3-ketobutyrate coenzyme A ligase TERM 3486 4634169 - 4634141 - R 86 -3.7 -5.40004 | opp_overlap 4634144 4634147, overlap 4634144 4634146 GATTAAATCAAAAAA CGAGAGGGTTGCC GGA AGCAACGCTTACG GCTGCGATCTTCCTC tdh 4635641 - 4634589 - | L-threonine 3-dehydrogenase Acid345_3921 4637414 - 4635810 - | 5-oxoprolinase (ATP-hydrolyzing) TERM 3487 4636492 - 4636452 - G 85 -15.5 -3.14344 | CACTGGCCGCATTAA TCCGCTGGTTGCCGGCA CGTCTTC CGCCAGCAAACAGCGGA ATACGTAGAAACATG TERM 3488 4637344 - 4637319 - G 74 -7.5 -4.3739 | gap 1, opp_overlap 4637320, overlap 4637320 4637321 GATGTTGGGAGAAAA CGCGGTGCGTCG TAG CGCCGCACC-CA TCTCCTCGGCAATCG TERM 3489 4637718 - 4637737 + H 100 -11.4 -5.56264 | opp_overlap 4637718 GAAATCGTCTAGAGA CCTCCGCA GGAA TGCGGGGG TTTTTTATCTTTGGG TERM 3490 4638006 - 4637987 - g 74 -2.1 -5.0065 | overlap 4637988 4638003 CAGCCACAAAGAAAA CTCGCTC GAAGAA GAACGAA GAGCTCGTCATTCCC Acid345_3922 4637956 - 4638390 + | MerR family transcriptional regulator Acid345_3923 4640052 - 4638796 - | major facilitator transporter Acid345_3924 4640148 - 4640414 + | hypothetical protein Acid345_3925 4640501 - 4641082 + | putative phophoslipid binding protein Acid345_3926 4641208 - 4641579 + | response regulator receiver protein Acid345_3927 4642106 - 4641582 - | thioredoxin-like Acid345_3928 4642540 - 4642106 - | hypothetical protein Acid345_3929 4643211 - 4642537 - | HAD family hydrolase Acid345_3930 4644529 - 4643219 - | glucose/galactose transporter tnaA 4644695 - 4646071 + | tryptophanase TERM 3491 4646117 - 4646089 - f 75 -13.1 -2.62515 | opp_overlap 4646060, overlap 4646077 4646076 AACCGCGGTACATTA CTGCGCTCGCTCG TTT CGAGCAGGCACAG GAATCCGTGTGCGCA TERM 3492 4646519 - 4646533 + F 70 -2.8 -4.82162 | AATGTCCAAGGTTAA GCTC CCCCAAA GAGC TTTTATCTTGTTCTG Acid345_3932 4646846 - 4648012 + | response regulator receiver modulated serine phosphatase Acid345_3933 4648068 - 4648964 + | WD-40-like beta propeller repeat-containing protein TERM 3493 4648974 - 4649005 + T 71 -10.9 -3.17901 | gap 1, opp_overlap 4648965, overlap 4648969 AGATAAGCCGGGGTG C-CCCACCCTTTCC CCGAA GGGGAGGGTGGGAG TTCACTTCGCCGTAT Acid345_3934 4652360 - 4649007 - | hypothetical protein TERM 3494 4651240 - 4651292 + g 71 -10 -3.61398 | overlap 4651242 ATCGGGTTCCACGTT GTG-CCACCGTCAGTGGTCTTGTAGA GGT TCTG-GAGACCACCGCCGGTGGATAC TTCTTCCGCAGCGAG Acid345_3935 4652503 - 4654035 + | IgA peptidase. metallo peptidase. MEROPS family M64 TERM 3495 4654043 - 4654076 + F 100 -13.9 -4.27316 | gap 1, opp_overlap 4654037, overlap 4654038 4654039 4654044 CAAACTAATCCGGGT GCCCCGTCCTTATCGC GAA GCGATAGGG-CGGGGA TTTTCCCTTCCGCAG TERM 3496 4654044 - 4654075 + F 100 -17.4 -3.16068 | gap 1, opp_overlap 4654037, overlap 4654038 4654039 4654043 AAACTAATCCGGGTG CCCCGTCCTTATCGC GAA GCGATAGGG-CGGGG ATTTTCCCTTCCGCA Acid345_3936 4654159 - 4656399 + | TPR repeat-containing serine/threonin protein kinase Acid345_3937 4656455 - 4657885 + | hypothetical protein Acid345_3938 4657882 - 4658628 + | nucleotidyl transferase TERM 3497 4659285 - 4659271 - g 71 -10 -3.53091 | opp_overlap 4659259, overlap 4659283 ATCGTCTTCCTCAAA GGCTTC AGT GAAGCC ATCGGTCTGGCATCC TERM 3498 4660459 - 4660440 - g 75 -5.6 -4.57073 | CACGCTGCGCAAAAA CGGTGACG ACTA CATCGCCG AGATCCATGGCGCTC Acid345_3939 4658689 - 4660692 + | hypothetical protein Acid345_3940 4662174 - 4660708 - | hypothetical protein TERM 3499 4662264 - 4662298 + r 83 -10 -4.11484 | opp_overlap 4662269, overlap 4662265 4662269 ATCACGGCAGGCATG ACAAAGGGCTGGAAAA CAG TCTTCCAGCCCTTCGC TTTTCGAGAATTGGA TERM 3500 4662265 - 4662297 + r 84 -13.5 -3.06569 | opp_overlap 4662269, overlap 4662264 4662269 TCACGGCAGGCATGA CAAAGGGCTGGAAAA CAG TCTTCCAGCCCTTCG CTTTTCGAGAATTGG TERM 3501 4662293 - 4662269 - R 100 -15.1 -3.97947 | opp_overlap 4662265 4662264 4662269 GGCAGGCATGACAAA GGGCTGGAAAA CAG TCTTCCAGCCC TTCGCTTTTCGAGAA TERM 3502 4662269 - 4662293 + r 84 -12.9 -3.36823 | opp_overlap 4662269, overlap 4662265 4662264 GGCAGGCATGACAAA GGGCTGGAAAA CAG TCTTCCAGCCC TTCGCTTTTCGAGAA Acid345_3941 4663300 - 4662323 - | TPR repeat-containing protein Acid345_3942 4663469 - 4664266 + | hypothetical protein Acid345_3943 4664263 - 4665024 + | oxidoreductase, molybdopterin binding TERM 3503 4665042 - 4665073 + T 95 -14.6 -3.30771 | opp_overlap 4665049, overlap 4665043 4665049 AATCTGTTACGGCCA AGAAAAATCCCAGC TCGC GCTGGGATTTTTCG TTATCGAAACTCTGA TERM 3504 4665043 - 4665072 + T 95 -18.1 -2.58249 | opp_overlap 4665049, overlap 4665042 4665049 ATCTGTTACGGCCAA GAAAAATCCCAGC TCGC GCTGGGATTTTTC GTTATCGAAACTCTG TERM 3505 4665049 - 4665066 + T 100 -11.3 -4.93365 | opp_overlap 4665049, overlap 4665043 4665042 TACGGCCAAGAAAAA TCCCAGC TCGC GCTGGGA TTTTTCGTTATCGAA TERM 3506 4665066 - 4665049 - T 100 -11.3 -5.07486 | opp_overlap 4665049 4665043 4665042 TACGGCCAAGAAAAA TCCCAGC TCGC GCTGGGA TTTTTCGTTATCGAA Acid345_3944 4665612 - 4665094 - | hypothetical protein TERM 3507 4665332 - 4665359 + g 71 -12.8 -2.63596 | gap 1 GCTGCCGGTGCACCA CTT-GCCTGAGGC GTA GCCTCGGGCGAAG TGCTCTGCCCTGCCG Acid345_3945 4665817 - 4666662 + | enoyl-CoA hydratase/isomerase TERM 3508 4666999 - 4667010 + G 81 -3.6 -5.03145 | opp_overlap 4666997, overlap 4666997 TCGCTGCTAAGCACC GCTG CGAT CGGC TTTTTTGCCGAGTTC Acid345_3946 4666732 - 4668000 + | hypothetical protein Acid345_3947 4669422 - 4668019 - | hypothetical protein TERM 3509 4669508 - 4669518 + H 89 -3.2 -5.4505 | TGCGCCAGAATGCGA CGGA ATC TCTG TTTTTTATTCGCGAC Acid345_3948 4669801 - 4670916 + | NHL repeat-containing protein TERM 3510 4670928 - 4670958 + T 74 -10.4 -3.53012 | opp_overlap 4670933 4670934 CTAACCATGTCGCTG CAGAAGCCCCGG CATCGCC CCGGGGTCTCTG TTTCCAACCAAAAAC Acid345_3949 4672267 - 4671044 - | OmpA/MotB family outer membrane protein Acid345_3950 4672498 - 4674567 + | phosphodiesterase/alkaline phosphatase D TERM 3511 4675345 - 4675324 - f 89 -8.7 -4.56358 | opp_overlap 4675324 GACATCGATACAAAA TCCACTACC ATAT GGTTGTGGA TAGTCTCGACACAAC Acid345_3951 4675335 - 4675682 + | ArsR family transcriptional regulator Acid345_3952 4675669 - 4676166 + | hypothetical protein Acid345_3953 4676210 - 4676773 + | hypothetical protein Acid345_3954 4677369 - 4676884 - | GCN5-related N-acetyltransferase Acid345_3955 4678764 - 4677835 - | hypothetical protein Acid345_3956 4679151 - 4680077 + | hypothetical protein TERM 3512 4682023 - 4682008 - g 79 -5.4 -4.74103 | gap 1 CCGGGAAGGCAAAAA TGGTGGG CAA CCC-CCA GGTTCTTGCGCAGCT Acid345_3957 4680093 - 4682168 + | beta-lactamase-like Acid345_3958 4682343 - 4683095 + | carbonic anhydrase TERM 3513 4683320 - 4683287 - g 75 -3.9 -4.74989 | gap 1, opp_overlap 4683294 4683296, overlap 4683296 AAACAAGATATAAAA GTTAAACAAGGCAAGA GTT TCCTGCC-TGTTTCGC AAGTGATTCCTGCTC TERM 3514 4683312 - 4683296 - g 75 -8.7 -4.0921 | opp_overlap 4683296 4683294, overlap 4683287 ATAAAAGTTAAACAA GGCAAGA GTT TCCTGCC TGTTTCGCAAGTGAT Acid345_3959 4683104 - 4684192 + | hypothetical protein TERM 3515 4684435 - 4684423 - g 78 -3.3 -5.1356 | GCGCAGCAACAAAAA CCAGA GGA CCCGG AAGATGAAAAGAACA Acid345_3960 4684330 - 4685064 + | hypothetical protein Acid345_3961 4686335 - 4685319 - | hypothetical protein TERM 3516 4686401 - 4686414 + H 81 -3.8 -5.15969 | opp_overlap 4686401 CTATCTCCGGCTAAA TGCC AAAATC GGCA TTTTTTGGGTTGCGA TERM 3517 4686652 - 4686668 + H 86 -15.1 -2.88544 | GGCAGTTGCTTTTAA GCCCCGC GCA GCGGGGC TCTCTGAGCCTAAAA TERM 3518 4687176 - 4687204 + H 100 -17.4 -3.16564 | overlap 4687179 GAGGATGACGGGGTT TCACCGGCCCCG AGGAG CGGGGCCGGTGC TTGATAAGGTCGAGA TERM 3519 4687179 - 4687201 + H 95 -17.7 -2.78547 | overlap 4687176 GATGACGGGGTTTCA CCGGCCCCG AGGAG CGGGGCCGG TGCTTGATAAGGTCG TERM 3520 4688300 - 4688285 - g 78 -7.6 -4.53774 | overlap 4688287 AGAAACGAACGAAAA TGCTCA CCGC TGAGCA GCGAAAGGAAATTGC TERM 3521 4688407 - 4688390 - g 76 -3.3 -4.90525 | CAAGTTTAAAGAAAA GCCCTAA AAAA TCGGGGC GGGAGGTTTAAGGAA Acid345_3962 4687201 - 4688418 + | hypothetical protein TERM 3522 4688762 - 4688751 - g 70 -3.6 -4.62069 | overlap 4688758 CGTGCATTCGAAAAA CGCG AAAG CGCA AACGAAATTCATGCA Acid345_3963 4688422 - 4689903 + | recombinase Acid345_3964 4690234 - 4689962 - | hypothetical protein Acid345_3965 4692732 - 4690249 - | ribonuclease R TERM 3523 4692817 - 4692798 - H 91 -15 -3.14132 | opp_overlap 4692785 4692793 4692791 GCTGCTTTGTATCAA GGCGTGGC TTCA GCCACGCC GTAAGCTTTCGCAAA TERM 3524 4692856 - 4692835 - H 78 -7.1 -4.57341 | overlap 4692837 AAGCTTTCGCAAAAA CTCCGGGGC TTTA GCCCCTGCG CCTGATCCTACGGCG TERM 3525 4692955 - 4692939 - H 70 -5.1 -4.39329 | opp_overlap 4692939 4692937, overlap 4692941 AGCTGATATAAGAAA TGCCAAC ACT GTTGGAA TATTTACGCAAGACA Acid345_3966 4693119 - 4693625 + | hypothetical protein TERM 3526 4693672 - 4693649 - T 95 -14.6 -3.54177 | overlap 4693645 4693641 TCGAAAACGAATCAA GGGCGAAGGC CGCA ACCTTCGCCC CGTCCCAAACCATCC TERM 3527 4694120 - 4694100 - T 70 -3.2 -4.82901 | gap 1, overlap 4694102 CGCCGCCGATAAAAA GT-CTGGGC TTTA GCCCTGCAC CGCTAAACGCCCGCG Acid345_3967 4695745 - 4694123 - | integral membrane protein MviN TERM 3528 4695296 - 4695283 - G 74 -2.3 -4.87592 | overlap 4695284 CCACATAGAAGAAAA TCTGC GCCG GCAGC AGGATTCGCGTCAGT Acid345_3968 4695846 - 4696400 + | inorganic diphosphatase TERM 3529 4697090 - 4697054 - g 95 -10.1 -4.8622 | opp_overlap 4697053 4697055, overlap 4697055 GGCCCGAAGTAAAAA CGCGCTTAACCGAGCGT CTC ACGCGAAGTTAAGCGCT CTTGTCATCCTGAGC TERM 3530 4697089 - 4697055 - g 83 -13.6 -3.5125 | opp_overlap 4697053 4697055, overlap 4697054 GCCCGAAGTAAAAAC GCGCTTAACCGAGCGT CTC ACGCGAAGTTAAGCGC TCTTGTCATCCTGAG TERM 3531 4697055 - 4697089 + G 71 -11.4 -3.29273 | opp_overlap 4697055 4697054, overlap 4697053 GCCCGAAGTAAAAAC GCGCTTAACCGAGCGT CTC ACGCGAAGTTAAGCGC TCTTGTCATCCTGAG Acid345_3969 4696438 - 4697085 + | putative acetyltransferase Acid345_3970 4697688 - 4697194 - | hypothetical protein TERM 3532 4697526 - 4697539 + g 72 -6.7 -4.3534 | CGGCGTCGAACGACT CATCG CGCG CGATG TTTTCCTCATTGCGG Acid345_3971 4698251 - 4697688 - | putative secreted protein Acid345_3972 4699000 - 4698551 - | MerR family transcriptional regulator TERM 3533 4699019 - 4699036 + H 83 -9.9 -4.15833 | opp_overlap 4699012, overlap 4699014 CAAAAATCCTCTTGA CCTCAAG TTTA CTTGAGG TTTTAAGCTCCTGCT Acid345_3973 4699086 - 4699622 + | NADPH-dependent FMN reductase TERM 3534 4699707 - 4699721 + G 82 -10 -4.16842 | opp_overlap 4699688 GCCGCCATCCAGCAG GTCGTC GCC GACGAC TTTGTTGGAGGTCGC Acid345_3974 4699632 - 4700027 + | hypothetical protein Acid345_3975 4700074 - 4701525 + | glycosyl transferase family protein TERM 3535 4701530 - 4701519 - T 74 -7.2 -4.07568 | overlap 4701520 GCGGCTTTTCGAAAA GCGC TAGA GCGC GGCGACCCGGCGCTG Acid345_3976 4702745 - 4701522 - | major facilitator transporter TERM 3536 4702106 - 4702090 - G 78 -6.5 -4.63218 | CGCTGCCGAACAAAA CTGATGC CCT GCTTCAG GCTGGTGAGCACGCT Acid345_3977 4702838 - 4703209 + | RNA-binding S4 Acid345_3978 4703214 - 4703681 + | hypothetical protein TERM 3537 4705026 - 4705058 + G 70 -2.6 -4.82901 | gap 1, overlap 4705027 4705031 CGCTGTCGGTTCTTA TGCGGCCGCCGAAGC GTTG GTTTCGG-GCACGCG TTTTTATCGCCACGG Acid345_3979 4704517 - 4705944 + | hypothetical protein TERM 3538 4707649 - 4707627 - g 75 -12 -3.18264 | CCCGCGATTGAGGAA GCATCCACGT CCA ACGTGGAGGC TTACAAGCACTACCA TERM 3539 4707844 - 4707828 - g 75 -5.8 -4.58283 | overlap 4707830 GAATCTTTCCAAAAA GCGCAA GCTCT TCGCGC ACGCCTGCCGCGCTA Acid345_3980 4706040 - 4709111 + | TPR repeat-containing serine/threonin protein kinase Acid345_3981 4709671 - 4709120 - | hypothetical protein TERM 3540 4709663 - 4709684 + g 100 -15.9 -4.08692 | opp_overlap 4709660 4709656 4709657 AGGCAAAAGTGATGC GGGGCGCAA GACA TTGCGCCCC TTTTACAACGAATTA Acid345_3982 4711034 - 4709697 - | amidohydrolase TERM 3541 4710596 - 4710582 - G 80 -10 -4.03234 | CGGGCCGGAGATAAA GCCATC ATT GATGGC ATTGCGCAGGTCCAC Acid345_3983 4711117 - 4714413 + | alanyl-tRNA synthetase Acid345_3984 4714566 - 4715954 + | hypothetical protein TERM 3542 4715974 - 4715994 + T 100 -14 -5.26875 | opp_overlap 4715974 GTCTTCTCAACTACA GGCACGGC TTAAC GCCGTGCC TTTTTTCATTCACCG TERM 3543 4715994 - 4715974 - T 86 -14 -2.90075 | opp_overlap 4715974 GTCTTCTCAACTACA GGCACGGC TTAAC GCCGTGCC TTTTTTCATTCACCG Acid345_3985 4716431 - 4716000 - | hypothetical protein TERM 3544 4716594 - 4716625 + G 80 -2.2 -5.2696 | overlap 4716585 4716596 GGCAGAGCCTGACGG GACCGTCGCG CTTGATCTTCTT CGCGGCGGTG TTTTTTACGTTTTCC TERM 3545 4716705 - 4716722 + G 83 -7.7 -4.67556 | overlap 4716694 GGCAGATTGTGGCGA TGGTGCT CGGC AGCGCCA TTTTTGCGATCTTCT Acid345_3986 4716467 - 4717681 + | serine phosphatase Acid345_3987 4717785 - 4718318 + | bifunctional deaminase-reductase-like Acid345_3988 4718562 - 4718326 - | hypothetical protein TERM 3546 4718548 - 4718525 - G 100 -14.6 -5.0133 | opp_overlap 4718515 GATGCCGCCAAAAAA GAGGCGTGAC TTGC GCCACGCCTC GGAGGGTAAAGCATG Acid345_3989 4719983 - 4718598 - | 4-aminobutyrate aminotransferase Acid345_3990 4720698 - 4720297 - | hypothetical protein TERM 3547 4720403 - 4720392 - G 71 -7.2 -4.11692 | opp_overlap 4720391 CATTGATCTGCAAAA CCGC GTCT GCGG CTTCAGTGTGGCGGG Acid345_3991 4721006 - 4720743 - | hypothetical protein TERM 3548 4720981 - 4720949 - G 74 -6.9 -4.30576 | GGGGCATGACCAAAA TCCAGTAGATCGCGA ACA TCACGATCAGCAGGA CCCACCTTTGCCATC TERM 3549 4721386 - 4721369 - g 74 -7.7 -4.13767 | CGCGCGACGGCAAAA CCGTGCA GGAG TACACGG CAAAGTATCGCAAGG Acid345_3992 4721116 - 4722603 + | cysteinyl-tRNA synthetase TERM 3550 4722769 - 4722785 + F 100 -10.8 -5.31456 | CCGCTGACCCCTACG CCGCCC TCCCT GGGCGG TTTTTTGTGACTTAC Acid345_3993 4722858 - 4724033 + | von Willebrand factor, type A Acid345_3994 4724990 - 4724034 - | DMT family permease Acid345_3995 4725618 - 4725049 - | CDP-alcohol phosphatidyltransferase Acid345_3996 4725980 - 4725615 - | hypothetical protein TERM 3551 4725776 - 4725754 - G 71 -11.2 -3.26712 | opp_overlap 4725759, overlap 4725750 ATGGGGAAGAAGACA GCCGACGCGG TGA CCGCATCGCC ATCGCGTATCTGGCG TERM 3552 4726109 - 4726072 - R 71 -10 -3.53811 | gap 1, overlap 4726073 GGTACTGCGCGGAAA GGCTATGAAGTTCGGCC TAAGC GGC-GAACTCCATAGCA CGGCTACCATTCAAA TERM 3553 4726108 - 4726073 - R 79 -13.5 -2.72144 | gap 1, overlap 4726072 GTACTGCGCGGAAAG GCTATGAAGTTCGGCC TAAGC GGC-GAACTCCATAGC ACGGCTACCATTCAA Acid345_3997 4726429 - 4726088 - | anti-sigma-factor antagonist TERM 3554 4726677 - 4726644 - g 81 -11.7 -3.66654 | gap 1 GATTCGAAGGCGAAA TTCTGCTGCCGGAGTG CGG CGCTCCGGC-GCTGAA CGTAGGCGCAGCCAG Acid345_3998 4726462 - 4726755 + | hypothetical protein Acid345_3999 4727197 - 4726781 - | hypothetical protein Acid345_4000 4728045 - 4727200 - | hypothetical protein TERM 3555 4727885 - 4727909 + g 100 -9.1 -5.11836 | opp_overlap 4727882, overlap 4727889 GAGAGGAACCCATTG CCGCCGGCAGG CGT CCCGCCGATGG TTTTGTTTTCGATCT TERM 3556 4728094 - 4728066 - H 87 -13.5 -3.17688 | opp_overlap 4728073, overlap 4728073 TAACCACCGTAGTAA TTGAAAATGAAAT TCA ATTTCATTTTCAA CTTGGCCAGAATACG TERM 3557 4728087 - 4728073 - H 71 -5.8 -4.30014 | opp_overlap 4728073, overlap 4728066 CGTAGTAATTGAAAA TGAAAT TCA ATTTCA TTTTCAACTTGGCCA Acid345_4001 4728254 - 4728688 + | biopolymer transport protein ExbD/TolR Acid345_4002 4729578 - 4728685 - | ABC sugar transporter, periplasmic ligand binding protein TERM 3558 4729607 - 4729631 + H 71 -4.9 -4.55287 | overlap 4729610 TCGCACCCATCCTAC CGAGTGCGC CCTCGAA GCGCACCTG TTTTCTCTGCATGCC Acid345_4003 4729802 - 4731487 + | peptidase S10, serine carboxypeptidase TERM 3559 4731504 - 4731525 + T 100 -17.3 -5.06414 | CTCTGCGTGAGAGGG TGGCGCGGC TCCG GCCGCGCCA TTTTTGTTAACCCGC Acid345_4004 4731945 - 4731532 - | hypothetical protein Acid345_4005 4732544 - 4731957 - | hypothetical protein TERM 3560 4732123 - 4732143 + g 80 -9.6 -4.17048 | ATATCGCACTTGTAG CGCGCGGC CGCAC GCCGCTCG TTCTTTTCGCCACCG TERM 3561 4732696 - 4732670 - R 91 -12.3 -4.1899 | opp_overlap 4732670 GGATGGTACCCAAAA GTCCCGAAACG GGAGA CGCTCCGGGAC TTTTTCTAAGAGGAA TERM 3562 4732670 - 4732696 + r 86 -7.9 -4.82901 | opp_overlap 4732670 GGATGGTACCCAAAA GTCCCGAAACG GGAGA CGCTCCGGGAC TTTTTCTAAGAGGAA Acid345_4006 4733699 - 4732716 - | ABC sugar transporter, periplasmic ligand binding protein Acid345_4007 4733852 - 4734199 + | hypothetical protein TERM 3563 4734295 - 4734274 - T 71 -4.3 -4.65078 | opp_overlap 4734291, overlap 4734277 AGATTCCGAAGAAAA CGATCGCAA CTCC CCGCGCTCG CTCCGGCTTTGGCGG Acid345_4008 4736106 - 4734355 - | MscS mechanosensitive ion channel TERM 3564 4734622 - 4734636 + g 81 -11.4 -3.85698 | GCGAACATCTTCCGA GACCCG GTA CGGGTC TTTATCCGCAGGCAC Acid345_4009 4736308 - 4737060 + | hypothetical protein Acid345_4010 4738515 - 4737385 - | Rieske (2Fe-2S) protein Acid345_4011 4738611 - 4738997 + | hypothetical protein TERM 3565 4739054 - 4739031 - f 91 -14 -3.06183 | overlap 4739034 GTCATGGTGAGCGAA GAATCCGCAT ACCG ATGCGGATTC GCAGTCGAACCATCC TERM 3566 4739051 - 4739034 - f 74 -9.9 -3.67775 | overlap 4739031 ATGGTGAGCGAAGAA TCCGCAT ACCG ATGCGGA TTCGCAGTCGAACCA TERM 3567 4739361 - 4739378 + F 79 -2.7 -5.17488 | overlap 4739365 GATCCCATCTGTCAT CCTAC AAAACCGA GTAGG TTTTGTTTTCATGTT TERM 3568 4739365 - 4739383 + F 79 -7.5 -4.49756 | overlap 4739361 CCATCTGTCATCCTA CAAAACC GAGTA GGTTTTG TTTTCATGTTTCCCA Acid345_4012 4739525 - 4741330 + | hypothetical protein TERM 3569 4742273 - 4742247 - g 100 -14.4 -4.13014 | GGCACAGTCGCAAAA TGCGCCTCCGCC ACC GGCAGACGCGCA GCAGGCGAATGCGAA TERM 3570 4742518 - 4742504 - g 74 -11.4 -3.53444 | GCATGGGCGCGGAAA CCAGCG TCA CGCTGG CGAATGTTGCCGATA TERM 3571 4743869 - 4743812 - g 100 -21.3 -3.38812 | overlap 4743865 GCTCGTCCAACAACA GCCACTACGTTCCGCGTCCGCCGGCAA GTTC TGGCCGGCAGATGCAGAACGCACCGGC AGCGACCACGAATTC Acid345_4013 4741984 - 4744356 + | hypothetical protein TERM 3572 4744379 - 4744398 + F 100 -15 -5.36441 | opp_overlap 4744379 GCGTCAGCAACGGAA CGCCGCTC TTAG GAGCGGCG TTTTTTATGTCCGAA TERM 3573 4744398 - 4744379 - f 95 -15 -3.20723 | opp_overlap 4744379 GCGTCAGCAACGGAA CGCCGCTC TTAG GAGCGGCG TTTTTTATGTCCGAA Acid345_4014 4744507 - 4745838 + | glycoside hydrolase family protein Acid345_4015 4746460 - 4745840 - | glycosyl transferase family protein Acid345_4016 4747241 - 4746432 - | hypothetical protein Acid345_4017 4748237 - 4747359 - | hypothetical protein TERM 3574 4748846 - 4748878 + G 78 -11.4 -3.64703 | gap 1, opp_overlap 4748841 4748846 ACATGGAGAACGCAA CCTTCTGCGAGGAGG GCTC TCTTCTCGC-GAAGG TTTGGGTAACAAGAA TERM 3575 4750397 - 4750381 - g 78 -6.5 -4.56597 | GCCTTCCCTGAAAAA TCGGCGA ATC TCGGCGA TACGGTACAGTTTTT TERM 3576 4751379 - 4751355 - g 75 -10.1 -3.67296 | CATTACTTACGTAAA CGCTTCATTGA CGG TCAACAAAGCG ACTCCCACGGTGAGC TERM 3577 4751551 - 4751537 - g 71 -10 -3.62478 | overlap 4751529 GAACCAACGCGCAAA GCGTGA CAT TCACGC CGGCGGATGCTGTGG TERM 3578 4751633 - 4751611 - g 80 -9.8 -4.15044 | GTGCTGGTGAATAAA GCGCCGCTCA CGG TGAGCGCCAC CGCAACCAAATACTA Acid345_4018 4748596 - 4752423 + | integrin-like protein Acid345_4019 4752526 - 4752894 + | copper resistance protein CopC Acid345_4020 4752901 - 4754541 + | copper resistance D TERM 3579 4754538 - 4754567 + T 74 -11.5 -3.25204 | gap 1, overlap 4754536 TAATTACCGCGAGAT GTGAGGCGGA-GAC CCT GTGGTCCGCCTCAC TGTATTTCCGCCTAG Acid345_4021 4755616 - 4754579 - | secretion protein HlyD Acid345_4022 4756477 - 4755698 - | ABC transporter, ATPase subunit Acid345_4023 4757614 - 4756487 - | ABC efflux pump, inner membrane subunit Acid345_4024 4758242 - 4757619 - | TetR family transcriptional regulator Acid345_4025 4758338 - 4760167 + | hypothetical protein Acid345_4026 4761256 - 4760174 - | hypothetical protein Acid345_4027 4761566 - 4762438 + | enoyl-CoA hydratase/isomerase Acid345_4028 4762504 - 4763001 + | hypothetical protein TERM 3580 4763435 - 4763412 - f 90 -8 -4.83169 | overlap 4763399 4763413 4763414 ACGCCCGCATAAAAA GGGCCGCGAC CGAA GTCGCGGCAA ATAACTACAGAGGCT TERM 3581 4763434 - 4763413 - f 77 -11.5 -3.49419 | overlap 4763399 4763412 4763414 CGCCCGCATAAAAAG GGCCGCGAC CGAA GTCGCGGCA AATAACTACAGAGGC TERM 3582 4763433 - 4763414 - f 83 -15 -2.6933 | overlap 4763399 4763413 4763412 GCCCGCATAAAAAGG GCCGCGAC CGAA GTCGCGGC AAATAACTACAGAGG Acid345_4029 4763907 - 4764284 + | response regulator receiver protein TERM 3583 4764328 - 4764301 - f 77 -11.2 -3.53012 | opp_overlap 4764306, overlap 4764306 TCTCTCCGCTGCAAA CCATAGGCCGCC TTCG GGCGGCCTTTTG TGTTCACCAATCATT TERM 3584 4764306 - 4764323 + F 100 -14.1 -4.66537 | opp_overlap 4764301 4764306 CCGCTGCAAACCATA GGCCGCC TTCG GGCGGCC TTTTGTGTTCACCAA TERM 3585 4764323 - 4764306 - f 86 -14.1 -3.00525 | opp_overlap 4764306, overlap 4764301 CCGCTGCAAACCATA GGCCGCC TTCG GGCGGCC TTTTGTGTTCACCAA TERM 3586 4764553 - 4764529 - g 80 -9.3 -4.21194 | opp_overlap 4764529 4764532, overlap 4764532 GCCTACCAGGCAAAA CAACTCGGCAT CGG ATGCCACGTTG TTCTGATTGACGGTG Acid345_4030 4764355 - 4765278 + | YdjC-like protein Acid345_4031 4765275 - 4766438 + | glycosyl transferase, group 1 Acid345_4032 4767748 - 4766408 - | periplasmic sensor signal transduction histidine kinase Acid345_4033 4768962 - 4767751 - | threonyl/alanyl tRNA synthetase, SAD Acid345_4034 4770241 - 4769051 - | threonine synthase Acid345_4035 4771017 - 4770253 - | TPR repeat-containing protein TERM 3587 4770943 - 4770904 - G 71 -7 -4.23999 | gap 1, overlap 4770901 4770905 CCAGATCCAAAAGAA GTCCG-GCCGCTTGCGCAC AAA GTGCACCAGCGCCGCGATC ACCAGAATCCCGCCG TERM 3588 4771097 - 4771083 - H 81 -12.8 -3.06183 | GTCATCCTGAGCGAA GCGGCC GCA GGCCGC GAAGTCGAAGGACCC TERM 3589 4771522 - 4771499 - g 77 -12.4 -3.53224 | opp_overlap 4771484 4771484 4771483 GAGCGCCCGGGCAAA GGCGCGCTCA TTGT CGAGCGCACC GACGAGCTCACCGAA TERM 3590 4771845 - 4771827 - g 78 -11 -3.72576 | opp_overlap 4771827 4771826 TTTCCCGGGACGAAA TCGTCGCC ATC GGCGACAA CTTTAACGACATTGA Acid345_4036 4771157 - 4772011 + | Cof protein Acid345_4037 4772004 - 4772705 + | lytic transglycosylase, catalytic TERM 3591 4772988 - 4773006 + G 77 -11.7 -3.53733 | overlap 4772986 TTCAACTACTTCCTT CGCGCCA CGCGC TGGCGCG TCTTTCTGCGCTCGC Acid345_4038 4772808 - 4773800 + | hypothetical protein Acid345_4039 4773865 - 4774332 + | Zn-dependent dipeptidase Acid345_4040 4774353 - 4775024 + | peptidase M19, renal dipeptidase TERM 3592 4775174 - 4775159 - g 75 -9 -4.04806 | overlap 4775169 CGCGAGAGCAAAGAA GGCGAA TCCA TTCGCC GACGCCGCGAGTGCC TERM 3593 4775285 - 4775258 - g 87 -6.8 -5.00884 | ATGGTCGTCAAAAAA GACGGCCGCCGC GAGC GCTTCGACCGCC AAAAAGTTCTCAATG Acid345_4041 4775096 - 4775587 + | transcriptional regulator NrdR Acid345_4042 4775613 - 4776659 + | isocitrate dehydrogenase (NAD+) TERM 3594 4776707 - 4776727 + T 79 -7.6 -4.39889 | overlap 4776666 CGAAGGGAGGGTGGG CAAGCTCA CAACA TGGGCTTG TTTTGCTATAATTAT Acid345_4043 4777921 - 4776836 - | beta-lactamase TERM 3595 4777410 - 4777388 - G 74 -11.2 -3.53012 | overlap 4777389 CGTTCCTGGCTCAAA CGCTAGCGGC TCT GCCGCAAGCA GCGCCATGAAATCCG TERM 3596 4777409 - 4777389 - G 73 -12.5 -2.71712 | overlap 4777388 GTTCCTGGCTCAAAC GCTAGCGGC TCT GCCGCAAGC AGCGCCATGAAATCC Acid345_4044 4778435 - 4779469 + | aldo/keto reductase TERM 3597 4779504 - 4779484 - f 100 -16.9 -3.32562 | opp_overlap 4779484, overlap 4779474 ACAAATGGTGCATAA GACCCGCGA AAT TCGCGGGTC TTTTTCATTTTGAGC TERM 3598 4779484 - 4779504 + F 100 -16.9 -5.0925 | opp_overlap 4779484 4779474 ACAAATGGTGCATAA GACCCGCGA AAT TCGCGGGTC TTTTTCATTTTGAGC TERM 3599 4779580 - 4779565 - f 70 -3.2 -4.6971 | opp_overlap 4779565 TAAAGGCGAAGAAAA GGCG AATAAAAA CGCC TCAATTTCTCTCCTT TERM 3600 4779819 - 4779805 - g 71 -11.4 -3.29043 | opp_overlap 4779804 4779803 AATGTTCTGGCAGAA CCAGCG TTG CGCTGG CGTTTCTGGCGCAAA TERM 3601 4780315 - 4780304 - g 78 -3.6 -5.00616 | overlap 4780272 4780306 TTCCGCCGCAAAAAA GCCG TCGG CAGC GGTGGCGGCGTGGGG Acid345_4045 4779609 - 4780367 + | RecA/RadA recombinase-like TERM 3602 4780717 - 4780697 - g 75 -9.7 -3.92075 | AGCGGGACGGAGAAA CTGCTCGGT ACG ACGGAGCAG ATCGTCCGGCGAATG TERM 3603 4781140 - 4781150 + G 76 -6.8 -4.42806 | CGTACTTGCGCCGAT GCTG CAA CAGC TTTGTTTGCGAGTGC TERM 3604 4781559 - 4781538 - g 74 -13.7 -2.52543 | opp_overlap 4781558 ACTTTTCTGAACCCA CCCTCCGGC TAAA GCCGGAAGG GTGGGGGACCCACGG Acid345_4046 4780355 - 4781842 + | nucleotidyltransferase/DNA polymerase involved in DNA repair-like TERM 3605 4783030 - 4783044 + G 78 -8.5 -4.183 | AAGGGCGCGGCAGCG CCGCG AATTC CGCGG TTTGTTACGCGTTGG TERM 3606 4783518 - 4783551 + G 70 -12.3 -2.75382 | overlap 4783519 CTCGACAGCGTGGTG CCGATCGAGCCGGCG TCGA TGCCGGGCCGGTCGG TCGTTCAATGGGATA Acid345_4047 4781910 - 4785122 + | DNA polymerase III, alpha subunit Acid345_4048 4785272 - 4785814 + | ECF subfamily RNA polymerase sigma-24 factor Acid345_4049 4785884 - 4788799 + | TPR repeat-containing serine/threonin protein kinase Acid345_4050 4788947 - 4789291 + | type IV pilus assembly PilZ TERM 3607 4789376 - 4789394 + F 70 -9.6 -3.35813 | AGCGAGCGTTTGGAT GATCGTGG GAG TCACGATC TTGCTTGCGCTGGGA Acid345_4051 4789395 - 4790111 + | hypothetical protein TERM 3608 4792577 - 4792554 - g 74 -8 -4.18018 | GCGGCTCATCGAAAA GGCCTGCGGC TGCG GACGCACGCC GACTCTGGACGACAC Acid345_4052 4790200 - 4793667 + | 2-acyl-glycerophospho-ethanolamine acyltransferase TERM 3609 4794174 - 4794189 + G 78 -3.9 -4.93898 | overlap 4794173 4794178 GAAGGCAGAGCTTGG CTGCG CATCGT CGCGG TTTTTGTCGTGGTAT Acid345_4053 4793664 - 4794326 + | hypothetical protein TERM 3610 4794595 - 4794609 + G 72 -8.5 -3.86524 | opp_overlap 4794578 TGGGCAGGACATCTG CCGCG AGATC CGCGG TTTCTCGCCGAATGT Acid345_4054 4794404 - 4795084 + | two component transcriptional regulator Acid345_4055 4795109 - 4796869 + | periplasmic sensor signal transduction histidine kinase Acid345_4056 4797968 - 4796853 - | L-alanine-DL-glutamate epimerase fmaily protein Acid345_4057 4798843 - 4797965 - | NLP/P60 TERM 3611 4798941 - 4798954 + H 73 -5.3 -4.56597 | TGTGCATAATGCTCT GAAAC ATTC GTTTC TTTTTGGGAGAGGAC Acid345_4058 4798974 - 4799849 + | RpiR family transcriptional regulator TERM 3612 4800432 - 4800409 - gf 77 -7.4 -4.24342 | overlap 4800423 TGCTGTATGAACAAA TTGCGGCTGA GAAC TCGACCGCAA CGCTCGCTGAAGACG TERM 3613 4800590 - 4800566 - gf 77 -10 -3.91032 | CAATCAGGCCATAAA CGAATCGCGC CCAGT GCGGGATTCG AACATCGCCGGTGAC TERM 3614 4800764 - 4800743 - gf 93 -13.1 -4.0371 | opp_overlap 4800740 GACCGTGGAGACAAA CCACACGAT TCTG ATCGTGTGG GCCTTCATGGGGCTG Acid345_4059 4800189 - 4804169 + | PAS/PAC sensor hybrid histidine kinase Acid345_4060 4804144 - 4805241 + | response regulator receiver modulated metal dependent phosphohydrolase TERM 3615 4805275 - 4805246 - T 100 -15.7 -4.00042 | gap 1, opp_overlap 4805243 4805242 TCGCGGACTAAATAA GCGGGCG-CCCGCA TTG CGCGAGACGCCCGC GAAGTCTTGTCGCTT Acid345_4061 4807484 - 4805289 - | Beta-glucosidase Acid345_4062 4808030 - 4807641 - | response regulator receiver protein TERM 3616 4808293 - 4808271 - g 86 -3.2 -5.53288 | CCCAATCTAAAAAAA GCACTCCGCG ATC CGCGCCACGC CGAAAAGGTTCCTGA Acid345_4063 4808229 - 4808978 + | histidine kinase TERM 3617 4809017 - 4808997 - f 100 -11.9 -5.4833 | overlap 4809008 GCAGGCAAGAAAAAA GGGTAACCC AAC GGATTACCC GAAGATGAGCTGCGT Acid345_4064 4809365 - 4810006 + | two component LuxR family transcriptional regulator Acid345_4065 4810132 - 4811091 + | putative phophoslipid binding protein TERM 3618 4811112 - 4811139 + T 100 -13.5 -4.71186 | gap 1 AGGGACAGTTACCGA GCGGTCGTGAGG GCCAG CCTC-CGACCGC TTTTCTCTTCATCCT Acid345_4066 4812026 - 4811148 - | response regulator receiver protein Acid345_4067 4812738 - 4812037 - | two component LuxR family transcriptional regulator TERM 3619 4812913 - 4812892 - R 86 -10.9 -4.1347 | gap 1, opp_overlap 4812893 4812894 4812896, overlap 4812893 4812896 GGCCAACTACATAAA GTGACAGGGG TAC CCCCTGTC-C TTTCGAACAGGGTCA TERM 3620 4812913 - 4812893 - R 72 -11.1 -3.076 | opp_overlap 4812893 4812894 4812896, overlap 4812892 4812896 GCCAACTACATAAAG TGACAGGGG TAC CCCCTGTCC TTTCGAACAGGGTCA TERM 3621 4812893 - 4812913 + r 77 -11.1 -3.53444 | opp_overlap 4812892 4812893 4812896, overlap 4812894 4812896 GCCAACTACATAAAG TGACAGGGG TAC CCCCTGTCC TTTCGAACAGGGTCA TERM 3622 4812894 - 4812912 + r 83 -14.6 -2.71924 | opp_overlap 4812892 4812893 4812896, overlap 4812893 4812896 CCAACTACATAAAGT GACAGGGG TAC CCCCTGTC CTTTCGAACAGGGTC TERM 3623 4812896 - 4812910 + r 71 -11.4 -2.90496 | opp_overlap 4812892 4812893 4812896, overlap 4812894 4812893 AACTACATAAAGTGA CAGGGG TAC CCCCTG TCCTTTCGAACAGGG Acid345_4068 4815137 - 4812936 - | patatin Acid345_4069 4816614 - 4815247 - | Na+/H+ antiporter NhaA TERM 3624 4816821 - 4816806 - g 78 -8.2 -4.44915 | CAACCATTCAGAAAA GCCGCA CTCA CGCGGC TGGGCTTCGGTGCGG TERM 3625 4816908 - 4816884 - g 83 -9.2 -4.30719 | overlap 4816886 GGGTGCGACAAGAAA GAGGAGGCAG TTGCT CCGCCTCCAC CCGACGTGCAAGTGA TERM 3626 4816906 - 4816886 - g 75 -10.4 -3.75817 | overlap 4816884 GTGCGACAAGAAAGA GGAGGCAG TTGCT CCGCCTCC ACCCGACGTGCAAGT Acid345_4070 4816746 - 4817963 + | secretion protein HlyD TERM 3627 4818884 - 4818873 - g 74 -7.2 -4.30978 | overlap 4818874 TCGAACGCAGTAAAA GCCG CAGC CGGC GTGCGGGCCTTGATG TERM 3628 4819610 - 4819646 + G 73 -12.2 -3.14132 | CGCGGGTCTTACCGT GCTCGCCGGCTGGTTC GGCAA GAACCTGCCGAAGAGC TTCCTGCCCGACGAA TERM 3629 4820597 - 4820561 - g 72 -6.5 -4.30576 | opp_overlap 4820566 4820574, overlap 4820565 4820566 4820567 GTCGTACCAGGAAAA GAAAGCTGCGGAAGGCG TAC CGGCTTCTGCAATCTTC GGCATGTCGCTGCTG TERM 3630 4820593 - 4820565 - g 75 -3.7 -4.73614 | opp_overlap 4820566 4820574, overlap 4820561 4820566 4820567 TACCAGGAAAAGAAA GCTGCGGAAGGCG TAC CGGCTTCTGCAAT CTTCGGCATGTCGCT Acid345_4071 4817967 - 4821134 + | hydrophobe/amphiphile efflux-1 HAE1 TERM 3631 4822124 - 4822136 + G 77 -10.5 -3.89614 | TAACGGGGCTCTTTT CCGGC CCT GCCGG TTTGTGGAGCTTCGG Acid345_4072 4821136 - 4822530 + | RND efflux system, outer membrane lipoprotein, NodT TERM 3632 4822548 - 4822572 + T 100 -17.1 -5.0916 | TCTATCCTCTCCTCT GGGCGGGCCGG AAT TCGGCTCGCCC TTTTTCTATTCGACG Acid345_4073 4823075 - 4822578 - | hypothetical protein TERM 3633 4823840 - 4823863 + G 78 -6 -4.63218 | overlap 4823842 TCGCCATCGACAACT TTCGCCAG GACCGTAG CTGGCGGA TTTTGTTCGAGGCCA Acid345_4074 4823386 - 4825104 + | MscS mechanosensitive ion channel Acid345_4075 4825219 - 4826034 + | hypothetical protein Acid345_4076 4826148 - 4826708 + | hypothetical protein Acid345_4077 4827118 - 4828551 + | hypothetical protein Acid345_4078 4828573 - 4829571 + | hypothetical protein TERM 3634 4829595 - 4829616 + F 100 -15.9 -5.07486 | CAGGTATGTAATTTC GCCCCTTGC CCAC GCAAGGGGC TTTTTCTTGGCGATA TERM 3635 4830378 - 4830401 + G 71 -13.2 -2.59191 | gap 1, overlap 4830377 TACGCGAACCCCGCT CTCCAGGCCGC CAT GCG-CCTGGAG CTTCTCAACATCTCG Acid345_4079 4829721 - 4831262 + | alpha amylase TERM 3636 4832196 - 4832171 - g 95 -2.5 -5.81032 | opp_overlap 4832160, overlap 4832173 GAACGGCAAAAAAAA TGCCTTGAATC CCAA GAACGAAGGCA CCAAATCAGCAGCAC Acid345_4080 4831290 - 4834028 + | hypothetical protein TERM 3637 4834049 - 4834077 + F 73 -10.2 -3.3353 | overlap 4834047 4834050 ACCGGGATACCTTTT CATCGCCGCGAG TCTAC CTCGCGGCGACC TCTCTTTATGCCCAC TERM 3638 4834050 - 4834076 + F 78 -13.7 -2.59797 | overlap 4834049 4834047 CCGGGATACCTTTTC ATCGCCGCGAG TCTAC CTCGCGGCGAC CTCTCTTTATGCCCA Acid345_4081 4834289 - 4834687 + | response regulator receiver protein Acid345_4082 4836453 - 4834936 - | hypothetical protein TERM 3639 4836438 - 4836423 - G 72 -4.7 -4.67038 | TTCCGAAAATCAAAA GCGAT GAAAGA ATCGC GTTGAGACGGTTCAT Acid345_4083 4836675 - 4838375 + | ATP-dependent OLD family endonuclease Acid345_4084 4838383 - 4839210 + | hypothetical protein Acid345_4085 4839212 - 4840669 + | pyruvate kinase Acid345_4086 4840666 - 4841772 + | 6-phosphofructokinase TERM 3640 4844892 - 4844918 + G 82 -6.5 -4.77157 | gap 1, opp_overlap 4844887, overlap 4844887 4844885 GACCACGACATCGCC CTCGCCGCTGCG GTCG CGC-GCGCTGAG TTTTTGATCGCTTCA Acid345_4087 4841817 - 4845149 + | TPR repeat-containing serine/threonin protein kinase Acid345_4088 4845246 - 4847516 + | hypothetical protein TERM 3641 4848074 - 4848024 - g 75 -5.5 -4.56978 | gap 2, overlap 4848025 4848026 TCGTCAAAGAACAAA TCGCGC-AGCAG-ACCACGACCCTC GGC AAAGGCCGCACTGCTGCTGGCGCAA TTAAGAACGCAGTTT TERM 3642 4849515 - 4849500 - g 76 -7.5 -4.51196 | opp_overlap 4849502, overlap 4849502 TCGAAACCGACAAAA CCGCG GCGCAG CGCGG CCTCTACCTTCATCC Acid345_4089 4847537 - 4849645 + | hypothetical protein Acid345_4090 4850315 - 4849665 - | hypothetical protein TERM 3643 4850532 - 4850517 - g 74 -6.8 -4.25458 | gap 1, overlap 4850519 AAGGGCATGAAGAAA GAGGCCG TCC CGGCC-C GCACCTTCTTTCTTC TERM 3644 4850531 - 4850519 - g 75 -10.5 -3.72374 | overlap 4850517 GGGCATGAAGAAAGA GGCCG TCC CGGCC CGCACCTTCTTTCTT TERM 3645 4851432 - 4851405 - g 77 -7.6 -4.39571 | TTGACAAAGTCAAAA CCCACGCCGATG CCTG CACCTGAGTGGG CAAGTAAGTGGTGAC Acid345_4091 4850478 - 4851446 + | hypothetical protein Acid345_4092 4852913 - 4851948 - | translation factor SUA5 TERM 3646 4852130 - 4852160 + g 100 -17.6 -4.28548 | opp_overlap 4852117, overlap 4852131 CAGTGAGGTTGGGGT GCCCCATCCTACGC GCA GCGTAGGGTGGGGA TTTTCGTCCGTAACT TERM 3647 4852131 - 4852159 + g 100 -21.1 -3.16647 | opp_overlap 4852117, overlap 4852130 AGTGAGGTTGGGGTG CCCCATCCTACGC GCA GCGTAGGGTGGGG ATTTTCGTCCGTAAC TERM 3648 4852263 - 4852229 - G 72 -6.3 -4.30576 | opp_overlap 4852229, overlap 4852230 4852231 CTTTCACCAGCAAAA GCCGCGTCCGCGG GCTATAGTG CCGCGGATGCATC CCCGGCGACGGATGC TERM 3649 4852855 - 4852893 + g 71 -11.8 -2.91924 | gap 2, opp_overlap 4852856 4852859, overlap 4852854 4852859 TCGGTCGGAAACGAA ACAAGCCGCC-CG-GCCT TCAGC AGGCGCGCGGCGGCTTGG ATTTCTGCGGGATCG TERM 3650 4852892 - 4852856 - G 100 -15.3 -4.05788 | gap 2, opp_overlap 4852855 4852854 4852859, overlap 4852859 CGGTCGGAAACGAAA CAAGCCGCC-CG-GCCT TCAGC AGGCGCGCGGCGGCTTG GATTTCTGCGGGATC TERM 3651 4852859 - 4852889 + g 73 -11.2 -3.32997 | gap 2, opp_overlap 4852856 4852859, overlap 4852855 4852854 TCGGAAACGAAACAA GCCGCC-CG-GCCT TCAGC AGGCGCGCGGCGGC TTGGATTTCTGCGGG TERM 3652 4852889 - 4852859 - G 88 -11.2 -4.15396 | gap 2, opp_overlap 4852859 4852855 4852854, overlap 4852856 TCGGAAACGAAACAA GCCGCC-CG-GCCT TCAGC AGGCGCGCGGCGGC TTGGATTTCTGCGGG Acid345_4093 4854425 - 4852941 - | integrin-like protein Acid345_4094 4855332 - 4854547 - | amidinotransferase Acid345_4095 4855362 - 4855808 + | GCN5-related N-acetyltransferase Acid345_4096 4855825 - 4856688 + | GumN Acid345_4097 4857879 - 4856689 - | phosphoesterase TERM 3653 4858112 - 4858124 + H 73 -10.5 -3.4072 | overlap 4858117 CCAGAGCAGCCTCTC GCCGG CTT CCGGC TTCTAATCGGGAGTG Acid345_4098 4858137 - 4859396 + | manganese transporter NRAMP Acid345_4099 4859471 - 4859902 + | ferric uptake regulator family protein Acid345_4100 4859937 - 4860473 + | alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen TERM 3654 4860483 - 4860505 + F 100 -17 -3.56704 | opp_overlap 4860478, overlap 4860478 GTCTAACTGATCACC GGGGCCTGCT CGC AGCGGGCCCC TTGCTTTGCTGGAAG Acid345_4101 4860527 - 4861111 + | alkylhydroperoxidase TERM 3655 4861129 - 4861155 + T 86 -9.5 -4.27584 | gap 1, opp_overlap 4861129, overlap 4861133 GGATTGATCGAATTA GCGA-TGGCCTC TGCG GAGGCCATTTGC TTTTCCATTCGCGAT TERM 3656 4861133 - 4861150 + T 91 -11.3 -4.23528 | opp_overlap 4861129, overlap 4861129 TGATCGAATTAGCGA TGGCCTC TGCG GAGGCCA TTTGCTTTTCCATTC Acid345_4102 4861334 - 4861191 - | hypothetical protein Acid345_4103 4861426 - 4862325 + | hypothetical protein Acid345_4104 4862322 - 4862669 + | hypothetical protein TERM 3657 4862672 - 4862694 + T 100 -13.4 -4.0031 | opp_overlap 4862672 TACCGGAAAATGAAA CAGCTGCCGA ATC TCGGCAGCCG TTCTTTGCTACGAAT TERM 3658 4862694 - 4862672 - T 100 -15.6 -4.20806 | opp_overlap 4862672 TACCGGAAAATGAAA CAGCTGCCGA ATC TCGGCAGCCG TTCTTTGCTACGAAT Acid345_4105 4863050 - 4862718 - | nucleoid protein Hbs Acid345_4106 4864112 - 4863201 - | signal peptide peptidase A TERM 3659 4864104 - 4864086 - G 76 -3 -4.91712 | opp_overlap 4864089, overlap 4864089 TGCAACCCACAAAAA CACGCGTG AAC CACGATTG CTGGCCATAAGCAGA Acid345_4107 4864336 - 4864686 + | type IV pilus assembly PilZ Acid345_4108 4864908 - 4864687 - | death-on-curing protein Acid345_4109 4865305 - 4865078 - | SpoVT/AbrB-like Acid345_4110 4867185 - 4865344 - | 3-dehydroquinate dehydratase / shikimate dehydrogenase TERM 3660 4866321 - 4866331 + g 85 -3.2 -5.36441 | GAATACACGCCATCA GATC GTC GGTC TTTTTTGTGTGCAAC Acid345_4111 4867521 - 4868483 + | hypothetical protein TERM 3661 4868526 - 4868507 - T 86 -10.6 -4.17309 | opp_overlap 4868507 4868508, overlap 4868508 CAGCAGAAACAAGAA TGCGCCGC AAAT GCGGCGCG TTTCTTTTTGCGGAA TERM 3662 4868507 - 4868526 + T 100 -12.8 -4.85782 | opp_overlap 4868507 4868508, overlap 4868508 CAGCAGAAACAAGAA TGCGCCGC AAAT GCGGCGCG TTTCTTTTTGCGGAA TERM 3663 4868508 - 4868525 + T 95 -14.1 -3.50746 | opp_overlap 4868508 4868507, overlap 4868507 AGCAGAAACAAGAAT GCGCCGC AAAT GCGGCGC GTTTCTTTTTGCGGA TERM 3664 4868525 - 4868508 - T 91 -14.1 -3.09301 | opp_overlap 4868507 4868508, overlap 4868507 AGCAGAAACAAGAAT GCGCCGC AAAT GCGGCGC GTTTCTTTTTGCGGA Acid345_4112 4869107 - 4868544 - | AMMECR1 Acid345_4113 4869753 - 4869085 - | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase TERM 3665 4869159 - 4869140 - G 74 -13.6 -2.54634 | overlap 4869139 4869143 CGCGATAGTACGAAC GAACGCCG GCGC CGGCGTTC CGAGCTGCGATCAAT Acid345_4114 4870273 - 4870722 + | hypothetical protein TERM 3666 4870922 - 4870943 + T 95 -15.1 -3.29829 | opp_overlap 4870918 4870915, overlap 4870919 TTCAGAAACGACGCA GGGGCCGCT CGTT GGCGGCCCC TTGTAGCACCCTGTC Acid345_4115 4872253 - 4870985 - | Glu/Leu/Phe/Val dehydrogenase TERM 3667 4871397 - 4871407 + g 71 -8.2 -4.03234 | overlap 4871380 GCAATCATCAGGTCC GCGG TTG CCGC TTTCTCTGCGCCCGG TERM 3668 4873064 - 4873092 + G 93 -10.9 -4.61566 | GGCCGTGGCTGGTGA CGCCGCGCGGC GATCTCG GCTACGCGGCG TTTTCTACTTTCACC Acid345_4116 4872415 - 4873845 + | FAD dependent oxidoreductase TERM 3669 4873870 - 4873882 + F 70 -9.1 -3.67564 | opp_overlap 4873868 4873870 GCAGCATTCATAAGA TGGGG CAC CCCCA TTTCCCTGGATGATT Acid345_4117 4873892 - 4876201 + | TPR repeat-containing serine/threonin protein kinase Acid345_4118 4878869 - 4876203 - | serine/threonine protein kinase TERM 3670 4877142 - 4877164 + g 74 -7.6 -4.16943 | CCATAACGACGCGTC CACCTGCGGA GTT TCCGCCAGTG TTTTCGGCTCTCCGC Acid345_4119 4879759 - 4878905 - | hypothetical protein TERM 3671 4881368 - 4881402 + G 74 -6.4 -4.43272 | gap 1, opp_overlap 4881361, overlap 4881371 GCAACAAAGCGCAAG CGGTCGTCCGCGCCG CCGAAC TGGCG-GGACGATAG TTTTAGGTTTTAGGT Acid345_4120 4879933 - 4881402 + | anthranilate synthase, component I TERM 3672 4881670 - 4881650 - g 79 -6.8 -4.68506 | gap 1, overlap 4881641 AACGAAGCCCAAAAA GCCGCCGCC CTCT GGCG-CGAC CGCGCCGAAAGGTTG Acid345_4121 4881542 - 4883263 + | hypothetical protein Acid345_4122 4883375 - 4884901 + | hypothetical protein TERM 3673 4884958 - 4884906 - T 78 -13.6 -2.60244 | gap 2, opp_overlap 4884906 4884908 4884953, overlap 4884891 4884902 4884903 CCGTGAATTAATTCA GGGTGCCCCACCCTTATCGCGCGA GCCTTTT TCGCGCGAT-AGGGTGGGG-ACTT TTGAGCCCTGTCATC TERM 3674 4884908 - 4884956 + T 100 -21.3 -4.10657 | gap 2, opp_overlap 4884902 4884906 4884903, overlap 4884906 4884953 GTGAATTAATTCAGG GTGCCCCACCCTTATCGCGCGAG CCTTT TTCGCGCGAT-AGGGTGGGG-AC TTTTGAGCCCTGTCA Acid345_4123 4886097 - 4885042 - | hypothetical protein Acid345_4124 4886468 - 4886094 - | hypothetical protein Acid345_4125 4887102 - 4886527 - | anthranilate synthase, component II TERM 3675 4886894 - 4886880 - G 78 -8.5 -4.13014 | opp_overlap 4886890 GGCAGACCCCCAAAA CCGGG CGTTT CCCGG CAAAATGACGGATTA TERM 3676 4887363 - 4887373 + G 80 -4.6 -4.94058 | GCGATGTCAGTTCCC GCGG TAT CTGC TTTTATTTCGATTCG Acid345_4126 4887182 - 4887571 + | type IV pilus assembly PilZ Acid345_4127 4887587 - 4887940 + | hypothetical protein TERM 3677 4888548 - 4888538 - g 71 -6.8 -4.1466 | opp_overlap 4888529, overlap 4888543 AGCCAATCCGCAAAA CGCA ACC TGCG GATGTCCTCCGGCAC TERM 3678 4888606 - 4888596 - g 74 -8.2 -4.14392 | GCTGAAGTCGCAAAA GCCG AGC CGGC ACCTGCTGCACAACC Acid345_4128 4887975 - 4888862 + | hypothetical protein Acid345_4129 4888896 - 4889219 + | hypothetical protein Acid345_4130 4889278 - 4889601 + | hypothetical protein Acid345_4131 4890711 - 4889602 - | diguanylate cyclase Acid345_4132 4891282 - 4892028 + | gas vesicle synthesis GvpLGvpF TERM 3679 4892052 - 4892070 + T 100 -13.1 -4.8622 | opp_overlap 4892052 ATAATCTGCGCAGAA GGCGGCC GAGAA GGCCGCC TTTTTCATTACGCAC TERM 3680 4892070 - 4892052 - T 83 -13.1 -3.30338 | opp_overlap 4892052 ATAATCTGCGCAGAA GGCGGCC GAGAA GGCCGCC TTTTTCATTACGCAC Acid345_4133 4892551 - 4892087 - | hypothetical protein TERM 3681 4893811 - 4893823 + G 78 -6.3 -4.65263 | CCGTCGGCGAAGGTC TCTTC CGC GAAGA TTTGTTTTACCGGCT Acid345_4134 4892901 - 4894412 + | two component, sigma54 specific, Fis family transcriptional regulator TERM 3682 4894446 - 4894427 - f 72 -12.2 -2.64765 | opp_overlap 4894436 4894438, overlap 4894424 4894423 4894420 4894438 GAACGAGAGAACCCA GCGTTCCA GAAG TGGAACGC CCGTTCCACTGTTTT TERM 3683 4894436 - 4894457 + F 74 -7.3 -4.13014 | opp_overlap 4894427 4894424 4894423 4894420 4894438, overlap 4894438 AACCCAGCGTTCCAG AAGTGGAAC GCCC GTTCCACTG TTTTCCCAGTCTGAG TERM 3684 4894438 - 4894455 + F 74 -9.9 -3.66256 | opp_overlap 4894427 4894424 4894423 4894420 4894438, overlap 4894436 CCCAGCGTTCCAGAA GTGGAAC GCCC GTTCCAC TGTTTTCCCAGTCTG TERM 3685 4894749 - 4894769 + F 100 -9 -5.0925 | gap 1 TGCCTCTTTCTACGA GCGGCTTCG GAAA CGA-GCCGC TTTTTGATTTTGGGA Acid345_4135 4894922 - 4895287 + | TraR/DksA family transcriptional regulator TERM 3686 4895293 - 4895264 - T 70 -2.7 -4.76312 | GAGAAGATCGAAAAA GGTGAACTTGAAG CTGC CCGCTAGTTCGCC GCGAAGCAATCCTCA TERM 3687 4895294 - 4895343 + T 95 -10 -4.71223 | gap 1, opp_overlap 4895303 GCCCGCTAGTTCGCC GCGAAGC-AATCCTCAGTGCCCC CGTGT GGGGCACTTCGCATTTGCTGCGC TTTTCTGTGTTCTCG TERM 3688 4895764 - 4895783 + T 74 -10.7 -3.53012 | opp_overlap 4895764 CGCAGAAATAGAAAA CCGTCCC ACGCAC GGGACGG TTTCGCGAAACGAAC TERM 3689 4895783 - 4895764 - T 100 -11.4 -4.84918 | opp_overlap 4895764 CGCAGAAATAGAAAA CCGTCCCA CGCA CGGGACGG TTTCGCGAAACGAAC Acid345_4136 4897618 - 4895801 - | kelch repeat-containing protein TERM 3690 4896635 - 4896619 - G 75 -12.3 -3.20236 | opp_overlap 4896608, overlap 4896614 4896612 GAACCGAAGATTGAA GGCTACG GGC CGTAGCC ATCGACGCCGTGGTT Acid345_4137 4898447 - 4897725 - | hypothetical protein Acid345_4138 4898678 - 4899073 + | response regulator receiver protein Acid345_4139 4899172 - 4899876 + | hypothetical protein TERM 3691 4899891 - 4899921 + F 100 -14.1 -3.86015 | gap 1, opp_overlap 4899879 4899896, overlap 4899896 AATCGTCTCAGCTCA GCAAA-GGCGCGGC CACG GTCGCGCCTTTTGC TTTCTGCCGCGGCTG TERM 3692 4899915 - 4899896 - f 76 -10.6 -3.74693 | opp_overlap 4899891 4899896, overlap 4899879 TCTCAGCTCAGCAAA GGCGCGGC CACG GTCGCGCC TTTTGCTTTCTGCCG TERM 3693 4899896 - 4899915 + F 100 -12.8 -4.61873 | opp_overlap 4899879 4899896, overlap 4899891 TCTCAGCTCAGCAAA GGCGCGGC CACG GTCGCGCC TTTTGCTTTCTGCCG Acid345_4140 4900034 - 4900312 + | hypothetical protein TERM 3694 4900326 - 4900356 + F 95 -14.8 -3.34233 | overlap 4900330 AAACTTCGATTTTCC GGAACGGGCAGC CGCCAAA GCTGCCCGTTTC TTCTACAAATTCTCC TERM 3695 4900330 - 4900352 + F 93 -12 -4.31835 | overlap 4900326 TTCGATTTTCCGGAA CGGGCAGC CGCCAAA GCTGCCCG TTTCTTCTACAAATT TERM 3696 4900447 - 4900461 + G 71 -11.4 -3.28791 | CTCTCCCCGTTGTAA GCACCG TCC CGGTGC TTGTCCCAACAGAAT TERM 3697 4900513 - 4900528 + G 71 -6.8 -4.21194 | gap 1 TGGGACGGACTTTGT GCGCGCG CAA CGCG-GC TTTTCCATCGTCGAA Acid345_4141 4900409 - 4900993 + | hypothetical protein TERM 3698 4902953 - 4902935 - g 75 -10.2 -3.70068 | TATCACAACGTGAAA CCGGGCAC CAA GTTCCCGG CCATCATGTTCAACA Acid345_4142 4901048 - 4903171 + | prolyl oligopeptidase TERM 3699 4903844 - 4903808 - f 74 -7.3 -4.07568 | GTCTCTGCCGCAAAA TCCTCCTGAACACCTCT AAA AACGGCGTTAAGGAAGA CGAAGGCCTCGATTG Acid345_4143 4903862 - 4904413 + | hypothetical protein Acid345_4144 4904456 - 4904644 + | 50S ribosomal protein L32P TERM 3700 4904663 - 4904680 + F 93 -10.5 -4.40037 | opp_overlap 4904663, overlap 4904657 CCTCTGTACGTGAAA GGTCCGC TGCG GCGGGCC TTTTCCTGCTTATTT TERM 3701 4904696 - 4904726 + F 90 -8.2 -4.7497 | opp_overlap 4904708 4904711 TTTTCCTGCTTATTT GCGTTGACCACATC ACC GAGGTGCTCGGCGC TTTTTCATCGGTCAC Acid345_4145 4904766 - 4905845 + | phosphate:acyl-[acyl carrier protein] acyltransferase TERM 3702 4905893 - 4905872 - f 71 -10.1 -3.5393 | overlap 4905873 AGCAGCTTTGTGAAA GGGCACGAC TTCA GTCGTGCCG AAAAGCCCGAATAAG TERM 3703 4905892 - 4905873 - f 79 -13.6 -2.72144 | overlap 4905872 GCAGCTTTGTGAAAG GGCACGAC TTCA GTCGTGCC GAAAAGCCCGAATAA TERM 3704 4906523 - 4906568 + G 81 -3.9 -5.09225 | gap 1, opp_overlap 4906528 4906530 4906531, overlap 4906526 4906527 4906528 4906529 CCGACTGGAGTACGG GCAAAGAT-GTCCGCGAGAGAG ACA CACTCTTGCGGACCGTCGCTTC TTTTTTGGCTGCGAT TERM 3705 4906526 - 4906565 + G 70 -4.2 -4.64763 | gap 1, opp_overlap 4906528 4906530 4906531, overlap 4906523 4906527 4906528 4906529 ACTGGAGTACGGGCA AAGAT-GTCCGCGAGAGAG ACA CACTCTTGCGGACCGTCGC TTCTTTTTTGGCTGC TERM 3706 4906559 - 4906531 - g 71 -13.1 -2.61873 | opp_overlap 4906529 4906528 4906527 4906526 4906523, overlap 4906530 4906528 AGTACGGGCAAAGAT GTCCGCGAGAGAG ACA CACTCTTGCGGAC CGTCGCTTCTTTTTT Acid345_4146 4906033 - 4907184 + | hypothetical protein TERM 3707 4907222 - 4907238 + F 70 -9.5 -3.34902 | overlap 4907220 AATATATTGAGGTTT TTACCCT TAA AGGGTAA TCTTGTATCGTGGAC Acid345_4147 4907241 - 4907549 + | hypothetical protein Acid345_4148 4907549 - 4908016 + | XRE family transcriptional regulator Acid345_4149 4908078 - 4909367 + | dihydroorotase TERM 3708 4909587 - 4909615 + F 100 -13.9 -4.20806 | gap 1, opp_overlap 4909603 TCCTGACTTATTGGA GCCCCACTCGGC AAGAGC GCCG-GTGGGGC TTTCGTTTTGGGGTG TERM 3709 4910020 - 4910044 + G 71 -7.7 -4.00066 | overlap 4910021 GGCAGTTCGGTGACG TTCCAGCCGCC GGA GGTGGCAGGGG TTTGTCCGTTCTGCG TERM 3710 4910663 - 4910685 + G 76 -12.8 -3.16191 | overlap 4910667 TGGACTCGACGTACT CGAATGTCGG GTT CCGACATTTG TTGCTGCCGGTGTGG TERM 3711 4910667 - 4910681 + G 82 -10 -4.2461 | overlap 4910663 CTCGACGTACTCGAA TGTCGG GTT CCGACA TTTGTTGCTGCCGGT Acid345_4150 4909720 - 4910865 + | hypothetical protein Acid345_4151 4911876 - 4910974 - | beta-lactamase TERM 3712 4911209 - 4911222 + g 91 -4.5 -5.61596 | overlap 4911204 4911204 4911199 TCAGGGAGCAGCCGC GGGAG CGGG CTCTC TTTTTTTGTGCACAT TERM 3713 4911939 - 4911910 - R 100 -15.7 -4.09685 | opp_overlap 4911903 4911933, overlap 4911911 CGCGATTTCGTAAAA TCCCCACCCTCCC TTCG GGAAGGGTGGGGC ACCCACGTTTATCGC TERM 3714 4911938 - 4911911 - R 100 -19.2 -3.05597 | opp_overlap 4911903 4911933, overlap 4911910 GCGATTTCGTAAAAT CCCCACCCTCCC TTCG GGAAGGGTGGGG CACCCACGTTTATCG Acid345_4152 4914443 - 4911948 - | glycoside hydrolase family protein TERM 3715 4913120 - 4913132 + g 70 -4.8 -4.44667 | overlap 4913094 GGGTGAGCGCGGGCG GACC GGTGA GGTC TTTGTTGTTAAAGAA TERM 3716 4913533 - 4913552 + g 73 -3.4 -4.7497 | opp_overlap 4913533 CCGAACTCGATCGAA GTGCGCAG GATG CGGCGAAC TTTTTCGTCGATGAC TERM 3717 4914415 - 4914389 - G 83 -13.8 -3.41878 | GCGCTGAAGCGACAA CGGCAACGCT GAGGAGA AGCGTTGCCG AGAACTTGCGGAGGA Acid345_4153 4915875 - 4914457 - | glucosylceramidase TERM 3718 4915369 - 4915385 + g 70 -2.1 -4.86621 | opp_overlap 4915372, overlap 4915370 CCATCCGGGCGGAGA CCAGGGC GTG GCCATGA TTTTTAGTTCGGGAT TERM 3719 4915712 - 4915656 - G 70 -12.4 -2.77895 | opp_overlap 4915655 4915695 4915696, overlap 4915655 GCCAGGCGGAAGAAT CGGTGAGCGACGCGCCGAAGCCATC-GA TGG TCTGATA-CTTCTTCGCGGCACTCACCG TGAGGGTTGTGCTGG TERM 3720 4915928 - 4915887 - R 95 -10.8 -4.57569 | opp_overlap 4915898, overlap 4915888 4915889 TCATGTCGGGAAAAA TTTCGCACAGACCCGTGA AAGAAA CCACGGGTCTGTGCGGTG CTAGTGGAGGTTAGA TERM 3721 4915927 - 4915888 - R 95 -14.3 -3.3422 | opp_overlap 4915898, overlap 4915887 4915889 CATGTCGGGAAAAAT TTCGCACAGACCCGTGA AAGAAA CCACGGGTCTGTGCGGT GCTAGTGGAGGTTAG TERM 3722 4915926 - 4915889 - R 95 -17.8 -2.60211 | opp_overlap 4915898, overlap 4915888 4915887 ATGTCGGGAAAAATT TCGCACAGACCCGTGA AAGAAA CCACGGGTCTGTGCGG TGCTAGTGGAGGTTA Acid345_4154 4919559 - 4915939 - | TonB-dependent receptor TERM 3723 4920558 - 4920543 - g 73 -11.8 -3.12999 | opp_overlap 4920553 GGATCGCAGACGCAA CCGGCG TTTT CGCCGG ATGGGAACCAAGTGG Acid345_4155 4919970 - 4922123 + | transcriptional regulatory protein-like TERM 3724 4922516 - 4922461 - T 84 -2.7 -5.29885 | gap 3, overlap 4922472 4922474 AATCCAAAAACAAAA TCAAAAGCAAAGACCCCGCCC-TATCGC TTC GCGATAAGAACGGGG-CACC-CTTGTGA GAGCTAGTGAGCGAT TERM 3725 4922506 - 4922472 - T 86 -10.1 -4.30827 | overlap 4922461 4922474 AAAATCAAAAGCAAA GACCCCGCCC-TATCGC TTC GCGATAAGAACGGGG-C ACCCTTGTGAGAGCT TERM 3726 4922505 - 4922474 - T 89 -13.8 -3.7201 | gap 1, overlap 4922472 4922461 AATCAAAAGCAAAGA CCCCGCCC-TATCGC TTC GCGATAAGAACGGGG CACCCTTGTGAGAGC Acid345_4156 4923044 - 4922520 - | N-acetylglutamate synthase Acid345_4157 4924425 - 4923031 - | argininosuccinate lyase TERM 3727 4924296 - 4924341 + g 90 -6.1 -5.24129 | gap 2, overlap 4924297 4924298 CGCCGGCCTTGGCCA AGGCTGTGGCATG-GG-CGCC ACTGGC GGCGACCTCATGCCTCAGCAG TTTTTTGTCGAAGGG TERM 3728 4924297 - 4924340 + g 72 -9.6 -3.73995 | gap 2, overlap 4924296 4924298 GCCGGCCTTGGCCAA GGCTGTGGCATG-GG-CGCC ACTGGC GGCGACCTCATGCCTCAGCA GTTTTTTGTCGAAGG TERM 3729 4924298 - 4924339 + g 73 -13.1 -2.83915 | gap 2, overlap 4924297 4924296 CCGGCCTTGGCCAAG GCTGTGGCATG-GG-CGCC ACTGGC GGCGACCTCATGCCTCAGC AGTTTTTTGTCGAAG Acid345_4158 4925639 - 4924422 - | argininosuccinate synthase Acid345_4159 4926648 - 4925632 - | ornithine carbamoyltransferase Acid345_4160 4927575 - 4926790 - | acetylglutamate kinase TERM 3730 4927306 - 4927269 - G 74 -13.3 -2.53345 | opp_overlap 4927293, overlap 4927268 4927266 CGCAGAGATGAAGAT CGCTGCCGCAGAGCCCG ATGG CGGGCTGGCCGACAGCG CCGATCGCTGCTGCA TERM 3731 4927544 - 4927556 + g 72 -4.7 -4.57837 | overlap 4927543 4927545 TCTTTGTTTTCGAGG GCGGC GCC GCCGA TTTTTAGGACGATCT Acid345_4161 4928624 - 4927572 - | N-acetyl-gamma-glutamyl-phosphate reductase Acid345_4162 4929071 - 4928625 - | ArgR family transcriptional regulator TERM 3732 4929313 - 4929285 - R 100 -21.8 -2.82516 | overlap 4929287 CCGCTCAGGATGACA GACGAGCCCCGG TTTTG CCGGGGCTCGTC GAGGGGACTCAGGGG TERM 3733 4929311 - 4929287 - R 100 -18.6 -2.96216 | overlap 4929285 GCTCAGGATGACAGA CGAGCCCCGG TTTTG CCGGGGCTCG TCGAGGGGACTCAGG TERM 3734 4929351 - 4929368 + r 78 -6.9 -4.56597 | overlap 4929353 TGAACTTCGGGCTAA CGGCGCT GCAC AGCGCAG TTTTTACAAAAAAGC Acid345_4163 4929924 - 4929442 - | response regulator receiver protein TERM 3735 4929605 - 4929641 + g 70 -12.3 -2.80816 | opp_overlap 4929606 ACGGGCTTGCGAACC AGTCCAGCGATCTTCGC GAG GCGAGGATCGTTGGAGA TATCGTCAGTGGGGA TERM 3736 4929686 - 4929675 - G 75 -3.6 -4.78572 | CGGTAATCAACAAAA CCGG CACT CCGA TCTTCCAGGCAGCGA TERM 3737 4929792 - 4929805 + g 70 -4.5 -4.52589 | opp_overlap 4929792 AACCTAGCCAATCGA TTGCG GTAT CGCGA TTTTCTGTCGCGGAG Acid345_4164 4930231 - 4930674 + | hypothetical protein TERM 3738 4930827 - 4930854 + F 93 -4.9 -5.61596 | opp_overlap 4930831, overlap 4930831 AACCGAATTGGTACA GAGAGGCGC-CTC GCGA GGGAGCGCCT-TC TTTTTTTGTCGCAAT TERM 3739 4930831 - 4930851 + F 85 -6.8 -4.89054 | gap 1, opp_overlap 4930831, overlap 4930827 GAATTGGTACAGAGA GGCGC-CTC GCGA GGGAGCGCC TTCTTTTTTTGTCGC Acid345_4165 4930892 - 4931914 + | homoserine dehydrogenase TERM 3740 4932984 - 4932968 - g 73 -10.9 -3.36273 | CGGTGTCAATACGAA TGGCGAA ACT TTCGCCA GCAGAGTTGTCGAAG Acid345_4166 4931914 - 4933170 + | cysteine desulphurase-like protein Acid345_4167 4933429 - 4934727 + | Pyrrolo-quinoline quinone TERM 3741 4934801 - 4934824 + T 72 -11 -3.06183 | opp_overlap 4934804, overlap 4934804 GTGGCCTTCGGCGAC GAACCCGCAT TGTT AGGCGGGTTC TTCGCTCAGGATGAC Acid345_4168 4935557 - 4934844 - | two component transcriptional regulator Acid345_4169 4936462 - 4935554 - | periplasmic sensor signal transduction histidine kinase Acid345_4170 4936951 - 4936559 - | 3-demethylubiquinone-9 3-methyltransferase TERM 3742 4937048 - 4937064 + r 84 -13.7 -3.06183 | overlap 4937039 GGGCCCTTCGACTAC GTCGCGC TTT GCGCGAC TTCACTCAGGATCAC TERM 3743 4937129 - 4937114 - R 100 -11.8 -5.61881 | GTTGAAAAATAAAAA GGGCGC CGAA GCGCCC TTGAAGGATCGAGAG Acid345_4171 4938036 - 4937152 - | Delta-9 acyl-phospholipid desaturase Acid345_4172 4939934 - 4938195 - | single-stranded-DNA-specific exonuclease RecJ Acid345_4173 4940591 - 4940127 - | hypothetical protein Acid345_4174 4940722 - 4941000 + | hypothetical protein Acid345_4175 4940997 - 4941314 + | hypothetical protein TERM 3744 4941339 - 4941359 + F 100 -12.6 -5.54338 | opp_overlap 4941339 TCAGGGTTGAGAGAA TCGCCGGA GAAGA TCCGGCGA TTTTTATTTTGATTC TERM 3745 4941359 - 4941339 - f 85 -12.6 -3.48924 | opp_overlap 4941339 TCAGGGTTGAGAGAA TCGCCGGA GAAGA TCCGGCGA TTTTTATTTTGATTC Acid345_4176 4941800 - 4942150 + | type IV pilus assembly PilZ Acid345_4177 4942302 - 4943018 + | hypothetical protein Acid345_4178 4943015 - 4943425 + | GtrA-like protein Acid345_4179 4943674 - 4944957 + | peptidase M48, Ste24p TERM 3746 4944995 - 4944972 - f 100 -8 -5.75342 | overlap 4944974 GTCGCGCAAAAAAAA GAGCCCGGAC TGGA GTCCGGGCGT TCCGAAGGAATCAGC TERM 3747 4944993 - 4944974 - f 100 -15 -4.52949 | overlap 4944972 CGCGCAAAAAAAAGA GCCCGGAC TGGA GTCCGGGC GTTCCGAAGGAATCA Acid345_4180 4945185 - 4946975 + | multicopper oxidase, type 2 TERM 3748 4947019 - 4947000 - T 100 -15 -5.72207 | CTGAAAGCAAAAAAA GCCCGGAC CGAA GTCCGGGC TGATAGCTGTTGAGA Acid345_4181 4948607 - 4947039 - | phospholipase C Acid345_4182 4948842 - 4949924 + | 4Fe-4S ferredoxin, iron-sulfur binding TERM 3749 4950099 - 4950126 + T 91 -14.9 -3.02434 | overlap 4950096 ATCCTGGAGCTCAAC GGCCTTCCGGT TCCCCC ACCGGAGGGCC TCATATTTTCTTGGG TERM 3750 4950174 - 4950147 - T 100 -15.6 -4.07568 | overlap 4950148 TTTTCTTGGGCAAAA TTCAGCCCTCCG CGCA CGGAGGGCTGAC CATCCGAAAGCAATT TERM 3751 4950173 - 4950148 - T 100 -19.1 -3.04398 | overlap 4950147 TTTCTTGGGCAAAAT TCAGCCCTCCG CGCA CGGAGGGCTGA CCATCCGAAAGCAAT Acid345_4183 4950398 - 4950195 - | cold-shock DNA-binding protein family protein TERM 3752 4950470 - 4950528 + H 100 -17 -3.18582 | gap 3, opp_overlap 4950470 4950471, overlap 4950471 CAAGGCACAAACGAA CGGGCTCCCGAGTTCTACGCA--A-GCGC ATCC GCGCATCATGCGTAGAACTCCGGAGCCCC TTCCTCCCTGCACTG TERM 3753 4950528 - 4950470 - H 100 -19.7 -3.63059 | gap 1, opp_overlap 4950470 4950471, overlap 4950471 CAAGGCACAAACGAA CGGGCTCCCGAGTTCTACGCAAG-CGCA TCCG CGCATCATGCGTAGAACTCCGGAGCCCC TTCCTCCCTGCACTG TERM 3754 4950527 - 4950471 - H 100 -23.2 -2.77113 | gap 1, opp_overlap 4950471 4950470, overlap 4950470 AAGGCACAAACGAAC GGGCTCCCGAGTTCTACGCAAG-CGCA TCCG CGCATCATGCGTAGAACTCCGGAGCCC CTTCCTCCCTGCACT TERM 3755 4950471 - 4950527 + H 100 -20.5 -2.50935 | gap 3, opp_overlap 4950470 4950471, overlap 4950470 AAGGCACAAACGAAC GGGCTCCCGAGTTCTACGCA--A-GCGC ATCC GCGCATCATGCGTAGAACTCCGGAGCCC CTTCCTCCCTGCACT TERM 3756 4951385 - 4951365 - g 74 -7.5 -4.26076 | opp_overlap 4951365, overlap 4951366 TCATCGTGATGAAAA GCATCGCGA TCC TCGCGACGA TGCTGATCTTCTTTT Acid345_4184 4950842 - 4951651 + | ribonuclease BN, putative Acid345_4185 4953046 - 4951652 - | NAD(P) transhydrogenase, beta subunit Acid345_4186 4953354 - 4953043 - | nicotinamide nucleotide transhydrogenase, subunit alpha TERM 3757 4953390 - 4953407 + r 74 -10.5 -3.54919 | opp_overlap 4953379 AGAAGCCCCAGTGAC GCGGGCG TAAA CGTCCGC TTTACCCAAATGCTT Acid345_4187 4954588 - 4953425 - | NAD(P)(+) transhydrogenase (AB-specific) TERM 3758 4955239 - 4955227 - g 75 -9.1 -3.98745 | CAAGGATGTAAACAA CGCCT GCA AGGCG AAGACCTCGCTCATC Acid345_4188 4954751 - 4955764 + | protein of unknown function DUF900, hydrolase-like TERM 3759 4955790 - 4955768 - T 100 -14.8 -4.62069 | overlap 4955769 GTCGGATCGTAAAAA TGCCCCTGCC TTT GGCAGGGGCG AAGTAAACACAAACT TERM 3760 4955789 - 4955769 - T 100 -18.3 -3.3692 | overlap 4955768 TCGGATCGTAAAAAT GCCCCTGCC TTT GGCAGGGGC GAAGTAAACACAAAC Acid345_4189 4959128 - 4955811 - | TonB-dependent receptor TERM 3761 4959406 - 4959395 - R 72 -3.6 -4.7033 | GAACGCAATACAAAA CGCC AGAT GACG AGCCTAGAGTCCTAC TERM 3762 4959547 - 4959528 - R 100 -15 -5.75342 | GGGTCGTAAAAAAAA CCCCTGCC TTTC GGCAGGGG CGAACAAATGGTGCA Acid345_4190 4962916 - 4959572 - | TonB-dependent receptor TERM 3763 4960884 - 4960834 - G 78 -6.2 -4.57353 | gap 2, opp_overlap 4960855 TCGCATCATAGAAAA TGCCGAAGCCGCCGCGGAGAACGG TCTTG CCGTT-TCCGAAGATGCTT-GGCA GGAAGTTTGGCGAGT TERM 3764 4962376 - 4962401 + g 74 -11.1 -3.58726 | opp_overlap 4962373 4962372 4962376 TCACCGAGAAACCCA TGCCGTTCGTG CTTC CACGGCCGGCA TTGTCTATAACGCCG Acid345_4191 4964402 - 4963242 - | beta-lactamase TERM 3765 4964436 - 4964463 + r 72 -11.3 -3.07994 | TCGCGCAAGTTCGAA GCTCCGCGC GCTGGAATTG GCGCGGAGC TTCGATGGAATTAGC Acid345_4192 4964833 - 4964474 - | alkylhydroperoxidase AhpD TERM 3766 4965591 - 4965609 + r 71 -4.6 -4.67552 | opp_overlap 4965535 4965536, overlap 4965536 4965536 TTCGTGAGACTTCGT GTCCTT CGTGGTT AAGGAC TTATTTTTTCGTCCA Acid345_4193 4967676 - 4965610 - | peptidase S9, prolyl oligopeptidase active site region TERM 3767 4967473 - 4967494 + g 81 -2.9 -5.24551 | GCCGCCGGCTACGGG GACAATCCA GATG TGGTTCGTC TTTTTGTTGGTTTCA TERM 3768 4968490 - 4968511 + r 72 -11.5 -3.09327 | CGTCCGCTGAAGCTT TCCCACCGC TTAC GCGGTGGGC TATTACGTGGCGTCG Acid345_4194 4970097 - 4968550 - | TPR repeat-containing protein TERM 3769 4970231 - 4970212 - R 100 -12.1 -5.24129 | overlap 4970197 GGGGGGCAGAAAAAA GCCCGCC GGGGTA GGCGGGC GAATGGTAGGAAATG Acid345_4195 4970740 - 4970270 - | cyclic nucleotide-binding protein Acid345_4196 4972893 - 4970851 - | periplasmic sensor signal transduction histidine kinase Acid345_4197 4973041 - 4973901 + | hypothetical protein TERM 3770 4973929 - 4973947 + F 100 -11.7 -4.6955 | overlap 4973927 CACGAACGTGTTGGA GGGCGAC TTCTT GTCGCCC TTTTCTATCTTGCTA TERM 3771 4974230 - 4974241 + G 71 -7.2 -4.10085 | opp_overlap 4974229 CACGACATCACAGAC CGCG GTAC CGCG TTTGATTCGTTTTTC Acid345_4198 4974132 - 4976777 + | hypothetical protein TERM 3772 4976811 - 4976780 - T 100 -15.2 -4.56133 | opp_overlap 4976785, overlap 4976782 TCCGAAGAACTAAAA GAGAAGGCGTCCGC GATC ACGGACGCCTTCTT GCACTTCAGACTGCG TERM 3773 4976809 - 4976782 - T 100 -17.8 -3.88577 | opp_overlap 4976785, overlap 4976780 CGAAGAACTAAAAGA GAAGGCGTCCGC GATC ACGGACGCCTTC TTGCACTTCAGACTG TERM 3774 4976785 - 4976806 + T 86 -13 -3.68222 | opp_overlap 4976782 4976780 AGAACTAAAAGAGAA GGCGTCCG CGATCA CGGACGCC TTCTTGCACTTCAGA TERM 3775 4976820 - 4976845 + T 90 -6.1 -5.18409 | overlap 4976822 CCTTCTTGCACTTCA GACTGCGATTC GCAA GAGTTGCAGCC TTTCTTTTTCTTTTA Acid345_4199 4977871 - 4976858 - | hypothetical protein TERM 3776 4976936 - 4976946 + g 71 -8.2 -4.00469 | opp_overlap 4976929, overlap 4976929 CCACATCACGCGCTT GCGC AGT GCGC TTTCCTTGATATTGC Acid345_4200 4978531 - 4978103 - | biopolymer transport protein ExbD/TolR TERM 3777 4978609 - 4978588 - R 100 -12.3 -5.10933 | TGAGCCAAAAGAAAA GGCGACGAA TCGC TTCGCCGCC ACGCTAATCTCCTGA Acid345_4201 4979269 - 4978628 - | HNH endonuclease Acid345_4202 4979917 - 4979276 - | phosphoribosyltransferase TERM 3778 4980571 - 4980621 + G 75 -11.7 -3.31792 | ATCTCGGTTTGCGAG CGGGCATGACGATCGCCGCAACC TACCC GGCAGCGGTAATCGCCATGGCCG TTCTGAAACTGCTGA TERM 3779 4981300 - 4981311 + G 71 -7.2 -4.21922 | ACTCATGGTCAGCGG CGGC TGGA GCCG TTTGGTTTTCAATCG TERM 3780 4982078 - 4982090 + G 72 -4.8 -4.56358 | CCTGATTGAGGTAAG GAGC CCGAT GCTC TTTTCTGTGGGTATG TERM 3781 4982228 - 4982208 - g 90 -8.2 -4.89339 | overlap 4982222 AACGATGCACAAAAA GCGCGCGT GGAAA ACGCGGGC GTGCTCACCGCATCG Acid345_4203 4980435 - 4982462 + | oligopeptide transporter OPT TERM 3782 4982491 - 4982510 + F 100 -15 -4.43283 | ACTTCCTTCCGGACG GGCCGCCA TTCG TGGCGGCC TTTCTGTTTCTGTAG Acid345_4204 4982538 - 4983233 + | hypothetical protein Acid345_4205 4983230 - 4983520 + | hypothetical protein Acid345_4206 4983534 - 4985006 + | Na+/solute symporter Acid345_4207 4985011 - 4985748 + | hypothetical protein Acid345_4208 4985757 - 4986923 + | peptidase M24 Acid345_4209 4986923 - 4987354 + | hypothetical protein TERM 3783 4987380 - 4987395 + G 89 -6.1 -5.09895 | GACCCACTTCAGCGC CGCGA TTGTGT TCGCG TTTTTTGCATCAATC Acid345_4210 4987351 - 4987533 + | hypothetical protein Acid345_4211 4988511 - 4987570 - | GCN5-related N-acetyltransferase Acid345_4212 4990300 - 4988627 - | glycosyl transferase family protein TERM 3784 4989598 - 4989587 - G 70 -2.2 -4.7254 | overlap 4989588 ATGGGTGATGAAAAA CTCG CGGA CGAA GCCCGGATTCGCATG Acid345_4213 4990557 - 4990300 - | hypothetical protein Acid345_4214 4991523 - 4990567 - | phosphoesterase, RecJ-like TERM 3785 4990624 - 4990596 - G 74 -12.6 -3.01712 | gap 1, opp_overlap 4990604, overlap 4990598 GTTTTCCGTCCAAGA GACGGAACTGCAT CAGG ATGC-GTTCCGTC GCAACCGAGAGCGGC Acid345_4215 4991962 - 4991591 - | ribosome-binding factor A TERM 3786 4991903 - 4991941 + g 78 -11.1 -3.65827 | overlap 4991904 4991907 GAGGATGGCCCCAAT C-TCTTCGCGAATCGCCTC GCC GAGGCG-TTCGCGGTGATG TTTCAGTGCGCGTTG TERM 3787 4991904 - 4991939 + g 87 -14.8 -3.40775 | gap 1, overlap 4991903 4991907 AGGATGGCCCCAATC TCTTCGCGAATCGCCTC GCC GAGGCG-TTCGCGGTGA TGTTTCAGTGCGCGT TERM 3788 4991907 - 4991936 + g 83 -15.1 -2.86124 | gap 1, overlap 4991904 4991903 ATGGCCCCAATCTCT TCGCGAATCGCCTC GCC GAGGCG-TTCGCGG TGATGTTTCAGTGCG TERM 3789 4992042 - 4992005 - R 75 -5.8 -4.58663 | gap 2, opp_overlap 4992005 ACTACTCTGGAAAAA CGCG-AACGA-AAAAGAA TACG CCCTTTTGTCGTTTCGCG TTATGAATTCTGTTT Acid345_4216 4992355 - 4992065 - | hypothetical protein TERM 3790 4992427 - 4992385 - R 95 -14.9 -3.73775 | GGGACGGGTACGAAA CATCCCGACAGCAGCGG TTGCGTGCC CCGCCGATGCCGGGATG CGAAATGCAGGGGCC TERM 3791 4992463 - 4992492 + r 87 -13.5 -3.25072 | overlap 4992458 CCCTCAGTTGTGTTG GGTAGCCCCGAGC TATA GCCCGAGGCTACC TTAGGTTCTAGTGCA Acid345_4217 4995535 - 4992500 - | translation initiation factor 2 TERM 3792 4993019 - 4993031 + g 74 -7.7 -4.18494 | TCCGCTACGGATCAT GGTGA TCT TCACC TTTTCCGTCGACATC TERM 3793 4994730 - 4994716 - G 74 -11.4 -3.53012 | opp_overlap 4994716 GCGGCGCGCTGTAAA CCGGAC GTG GTCCGG TTTGCGGAACGATCA TERM 3794 4994716 - 4994730 + g 74 -11.4 -3.53444 | opp_overlap 4994716 GCGGCGCGCTGTAAA CCGGAC GTG GTCCGG TTTGCGGAACGATCA TERM 3795 4994862 - 4994908 + g 75 -10.6 -3.75153 | TTTGCGGTTACGTGT GCGCCAGTGTCCGCGGCGGGAG CGA CTCGCTCCGGCGAAACCGGCGC TTTAACTTCGGGCGC TERM 3796 4995350 - 4995364 + g 78 -11.4 -3.68073 | GTCTTCTCCGGCGCT TCGCCG ACG CGGCGA TTCTTCGGTCCCGTG Acid345_4218 4997227 - 4995623 - | NusA antitermination factor Acid345_4219 4997778 - 4997269 - | hypothetical protein TERM 3797 4997339 - 4997353 + g 100 -12.8 -4.60317 | TTCCGTTCTACCACC GGGGCC TTC GGCCCC TTTTGCTTCTTCTGT TERM 3798 4997908 - 4997893 - R 100 -10.4 -5.34381 | opp_overlap 4997890 4997893 AAAGGGAAATAAAAA GTGGGC ATTT GCCCAC TGGTGTACTTCGCCA TERM 3799 4998182 - 4998147 - R 100 -17.7 -3.28924 | opp_overlap 4998153, overlap 4998148 4998153 CAGTTTGCCCCACAA TGGAAATAGGCGGCC ATTATG GGCCGCCTATTTCCT GGGGGAGGGAGTTGA TERM 3800 4998181 - 4998148 - R 100 -21.2 -2.57211 | opp_overlap 4998153, overlap 4998147 4998153 AGTTTGCCCCACAAT GGAAATAGGCGGCC ATTATG GGCCGCCTATTTCC TGGGGGAGGGAGTTG TERM 3801 4998176 - 4998153 - R 93 -13.9 -3.80625 | opp_overlap 4998153, overlap 4998148 4998147 GCCCCACAATGGAAA TAGGCGGCC ATTATG GGCCGCCTA TTTCCTGGGGGAGGG TERM 3802 4998153 - 4998176 + r 89 -13.9 -3.72576 | opp_overlap 4998148 4998147 4998153 GCCCCACAATGGAAA TAGGCGGCC ATTATG GGCCGCCTA TTTCCTGGGGGAGGG TERM 3803 4998345 - 4998324 - R 73 -8.7 -3.81951 | overlap 4998319 4998308 GGCGATACCAGGAAA TCTTCCCGC GTAC GCGCGAAGA GATTGAAACGCTTCT Acid345_4220 4999627 - 4998539 - | hypothetical protein TERM 3804 4999483 - 4999463 - G 89 -2.5 -5.7946 | overlap 4999464 CTTGTAAGAAAAAAA CTCGTCG CTGTGTT CGACGAT GTGGCGATTCAACTC Acid345_4221 5000988 - 4999753 - | alanine racemase TERM 3805 5001003 - 5000975 - G 100 -18.1 -5.24129 | TCGGGGCAGAAAAAA CCGGGCCGCAGCA TAT CGCCGCAGCCCGG GGTAAAACGCTTTCG Acid345_4222 5004727 - 5001026 - | hypothetical protein TERM 3806 5002853 - 5002843 - G 71 -8.2 -4.03234 | overlap 5002844 CGCCGGTTACAGAAA CGCC ATC GGCG GCAGTGAAGTCCACT TERM 3807 5002986 - 5002996 + g 71 -6.8 -4.15044 | TCCACCAGTGAGGTC GCGT CAA ACGC TTTGTTGCAAGGACC TERM 3808 5004232 - 5004242 + g 100 -8.2 -5.52384 | TTGCCGAGATATCCA CCGC AAT GCGG TTTTTTTGATCGAGA TERM 3809 5005306 - 5005286 - R 75 -6.2 -4.61633 | gap 1 AGAGATGCGCAAAAA CATGCCAGC AGTC GCTG-CATG AGACGCGATCATAGT Acid345_4223 5006723 - 5005353 - | primary replicative DNA helicase TERM 3810 5006801 - 5006760 - R 75 -3.7 -4.88217 | overlap 5006765 ACCAAAAAATCAAAA CGAAAGGCGAAGATTCG GCGAACAA CGAATCTCCGCCCTAAA AACTCCGCATAAATA TERM 3811 5006796 - 5006765 - R 93 -12.4 -4.30827 | overlap 5006760 AAAATCAAAACGAAA GGCGAAGATTCG GCGAACAA CGAATCTCCGCC CTAAAAACTCCGCAT TERM 3812 5006980 - 5006965 - R 71 -4.6 -4.60797 | CCGGCACAGAGAAAA CTGTGC GGTC GCGCAG GTCAGCCACTCGCAG Acid345_4224 5007350 - 5007105 - | hypothetical protein TERM 3813 5007443 - 5007425 - R 93 -13.8 -3.84451 | opp_overlap 5007424 5007434 GGGCCGAAATTCAAA GGCGCCCA TCG CGGGCGCC CTCTCGTTAGATGAT Acid345_4225 5008559 - 5007450 - | PpiC-type peptidyl-prolyl cis-trans isomerase TERM 3814 5009833 - 5009802 - g 79 -13 -3.28924 | overlap 5009803 GACCGCCGCCTACAA CCTGCCCAACGACG ATCG CGTCGTCGCGCAGA AGGGCTCCAAGCGCG TERM 3815 5009832 - 5009803 - g 78 -14.3 -2.57211 | overlap 5009802 ACCGCCGCCTACAAC CTGCCCAACGACG ATCG CGTCGTCGCGCAG AAGGGCTCCAAGCGC Acid345_4226 5008735 - 5010534 + | MutT/nudix family protein TERM 3816 5010698 - 5010724 + G 76 -3 -4.97402 | gap 1 TGGAACTCCACCTAG CCGA-AGAGAG CTCTTT CTCACTATCGG TTTTTCTACGTTTTG Acid345_4227 5010567 - 5010929 + | hypothetical protein TERM 3817 5011567 - 5011547 - g 77 -2.5 -5.03314 | CCGATCCTGAAAAAA GAAGACG GCCAAAT CGACTTC CACCGCTCCGCGCAA Acid345_4228 5010926 - 5011864 + | methionyl-tRNA formyltransferase TERM 3818 5011893 - 5011870 - f 91 -14 -3.06183 | overlap 5011873 GTCATCCTGAGCGAA GAATCCGGAT AACA ATCCGGATTC GCAGTCGAAGGACCC TERM 3819 5011890 - 5011873 - f 74 -9.9 -3.67775 | overlap 5011870 ATCCTGAGCGAAGAA TCCGGAT AACA ATCCGGA TTCGCAGTCGAAGGA Acid345_4229 5011960 - 5013258 + | sun protein TERM 3820 5013533 - 5013518 - T 80 -11.8 -3.41807 | opp_overlap 5013532, overlap 5013513 GCGAAAGAAATGCAA GCCCGC TTCA GCGGGC GGCGCGGCCCCTGTT TERM 3821 5013533 - 5013585 + T 75 -3.9 -4.89966 | gap 1, opp_overlap 5013513, overlap 5013532 5013534 GCCCGCTTCAGCGGG CGGCGCGGCCCCTGTTCGCGAGGC GGTTAA GCCTCGCGAAC-GCGACCTAACCC TTTATTTTTGAATAT Acid345_4230 5014448 - 5013690 - | PASTA domain-containing protein Acid345_4231 5016694 - 5014448 - | penicillin-binding protein 1A TERM 3822 5014598 - 5014620 + g 78 -6.2 -4.64861 | GTAGTCAATCCAGAT CGGCAGCG CGGCTTT CGCTCCCG TTTCTTTTGCGCCGA TERM 3823 5014629 - 5014639 + g 80 -2.4 -5.31275 | GCTCCCGTTTCTTTT GCGC CGA GCGA TTTTTTCTCGTCGAA TERM 3824 5016817 - 5016796 - R 88 -11.6 -4.20136 | opp_overlap 5016796 AGGCCCAAAAGGAAA TCGCGGAC TCGAAG GTCCGCGA TTCTCGATAACCCTA TERM 3825 5016796 - 5016817 + r 80 -12.3 -3.35996 | opp_overlap 5016796 AGGCCCAAAAGGAAA TCGCGGACT CGAA GGTCCGCGA TTCTCGATAACCCTA Acid345_4232 5018107 - 5016842 - | carboxyl-terminal protease TERM 3826 5018100 - 5018086 - G 71 -10 -3.53012 | GCTTTGGCGGGCAAA GACTCC TTT GGAGTC CGCTCATTATACCCC TERM 3827 5018256 - 5018218 - R 100 -24 -3.58533 | GGAGAATCTGCGAAA CGCCGAGGCACTAAGGAG TTA CTCCTAAATGCCTCGGCG GATACGCGAAAGACT Acid345_4233 5019217 - 5018270 - | Sel1 TERM 3828 5019473 - 5019419 - g 95 -15.1 -3.65902 | gap 1, overlap 5019420 5019422 GTCAGCCGAGCCAAA TGACCGACCTCAT-CGGGCCAAACCG TCTT CGCTTCGGCCCATATGAGGCCGATCT GCACACCCGCGAACT TERM 3829 5019472 - 5019420 - g 100 -18.6 -2.79327 | gap 1, overlap 5019419 5019422 TCAGCCGAGCCAAAT GACCGACCTCAT-CGGGCCAAACCG TCTT CGCTTCGGCCCATATGAGGCCGATC TGCACACCCGCGAAC TERM 3830 5019470 - 5019422 - g 84 -15.4 -2.94322 | gap 1, overlap 5019420 5019419 AGCCGAGCCAAATGA CCGACCTCAT-CGGGCCAAACCG TCTT CGCTTCGGCCCATATGAGGCCGA TCTGCACACCCGCGA Acid345_4234 5019418 - 5020827 + | transcriptional regulatory protein-like Acid345_4235 5020865 - 5022010 + | serine/threonine protein kinase TERM 3831 5022033 - 5022052 + T 100 -15 -4.0616 | opp_overlap 5022033 GGACGGCAATATGAA GCCCGCGA ATGC TCGCGGGC TTTGTCCTTCGACTA TERM 3832 5022052 - 5022033 - T 95 -15 -3.37245 | opp_overlap 5022033 GGACGGCAATATGAA GCCCGCGA ATGC TCGCGGGC TTTGTCCTTCGACTA Acid345_4236 5022950 - 5022075 - | sensor protein TERM 3833 5022937 - 5022917 - G 74 -6.9 -4.4078 | TGCCGGCAAGCAAAA TGAAGATCA AAT TGAACTTCA GCAACAGCTTCAAAG Acid345_4237 5023726 - 5024931 + | hydrogenase (NiFe) small subunit (hydA) TERM 3834 5025710 - 5025726 + G 71 -7.9 -4.07526 | opp_overlap 5025708 GTGCCGGCGAAGACT CTGCGCT GGC AGCGCCG TTTGTATCAGTACTT Acid345_4238 5024933 - 5025859 + | hydrogenase 2 protein HybA TERM 3835 5026560 - 5026583 + G 72 -6.6 -4.40652 | overlap 5026542 GCAGACACCATTTCT GCCGCTCC TCTATCTC GGCGCGGC TTGTTTTATGTCCTT Acid345_4239 5025856 - 5027187 + | nickel-dependent hydrogenase, membrane protein TERM 3836 5027498 - 5027516 + G 83 -11.8 -3.87373 | TGATTGCCCACGCGC TGCACGAT CAC ATCGTGCA TTTCTACCAGCTCTC Acid345_4240 5027197 - 5028888 + | nickel-dependent hydrogenase, large subunit TERM 3837 5028985 - 5029021 + G 84 -12.9 -3.67976 | opp_overlap 5028982 5028981, overlap 5028986 CCCATTACGAATTCG CCGATGGTGTCGAGGTC ATC GACCTCGGCACCCCCGC TTTGGAATTCGTGGA TERM 3838 5028986 - 5029020 + G 86 -16.4 -2.80464 | opp_overlap 5028982 5028981, overlap 5028985 CCATTACGAATTCGC CGATGGTGTCGAGGTC ATC GACCTCGGCACCCCCG CTTTGGAATTCGTGG Acid345_4241 5028885 - 5029433 + | peptidase M52, hydrogen uptake protein Acid345_4242 5032028 - 5029434 - | beta-mannosidase TERM 3839 5031489 - 5031521 + g 87 -14.1 -3.40867 | opp_overlap 5031499 GGGCGCCGTCTTAGC GCGCCAAGGATCGCG CGC CGCAATCTTCGGCGC TTCCTTAATCACTGA TERM 3840 5033472 - 5033453 - g 76 -13.6 -2.71144 | GAGGGTCGGCAAGCA CGCTCGCT CTGG AGCGAGCG ACTGTAGACAAGTTT Acid345_4243 5032775 - 5033479 + | hypothetical protein Acid345_4244 5033693 - 5034373 + | ECF subfamily RNA polymerase sigma-24 factor TERM 3841 5035399 - 5035384 - g 71 -10.4 -3.53012 | overlap 5035385 CCCTGGTGCTGGAAA GGCTGC AGCG GCAGCC TGAAGCTGCCGCCGC TERM 3842 5035417 - 5035385 - g 70 -11.9 -2.71712 | overlap 5035384 CCTGGTGCTGGAAAG GCTGCAGCGGCAGCC TGA AGCTGCCGCCGCATG GAAAGAGTATCTGAA Acid345_4245 5034366 - 5035484 + | TPR repeat-containing protein Acid345_4246 5036442 - 5035495 - | hypothetical protein TERM 3843 5036077 - 5036103 + g 78 -3.6 -4.90869 | CGCCCCGCCGCGCCT GGCCAGTACGAT CGT GTCCTGCTGACC TTTTTGCTTGATAAT Acid345_4247 5039625 - 5036458 - | TPR repeat-containing protein TERM 3844 5036764 - 5036736 - G 73 -13.1 -2.7185 | opp_overlap 5036738 5036742 5036755 AGCACGCGGCAAGCA CCGCAAGCCGGAC GCT GCCCAGCTTGCTG TTGCCGAGGGACTGG TERM 3845 5038380 - 5038366 - G 72 -8.6 -3.85698 | opp_overlap 5038366 5038365 5038359 GGCGCGCCTGAGAAA TTCGGA GGC TCCGAA GTTTCCCGTTTCCAG TERM 3846 5038734 - 5038707 - G 72 -8.4 -3.90744 | gap 1, opp_overlap 5038724, overlap 5038721 CGGGCTGCCAAAGAA GGTCAC-GCAACC AAC GGTCGCCGTGGCC GCGTTCGAGCACGAT Acid345_4248 5040154 - 5042265 + | hypothetical protein Acid345_4249 5042322 - 5043380 + | peptidase M12A, astacin TERM 3847 5043474 - 5043450 - f 95 -14.3 -3.63627 | opp_overlap 5043450 GCCTGACACCTCAAA TGCCTCCGGCA ATT CGCCGAAGGCA TTTTTTTGTGAAGCT TERM 3848 5043450 - 5043474 + F 100 -11.4 -5.61596 | opp_overlap 5043450 GCCTGACACCTCAAA TGCCTCCGGC AATTC GCCGAAGGCA TTTTTTTGTGAAGCT Acid345_4250 5043799 - 5044566 + | hypothetical protein TERM 3849 5046931 - 5046956 + G 79 -12.6 -3.36803 | opp_overlap 5046924 CCATTGAACGTCGCC GATGCCGCCG CAAACA CGGTGGCATC TTATACCTACAGTTC TERM 3850 5047051 - 5047066 + G 75 -10.4 -3.78022 | opp_overlap 5047038 AAGCAACTCGAGTAT GACGGC GTTG GCCGTC TTTCCTGGGTCTGCG TERM 3851 5047386 - 5047368 - g 78 -3.1 -5.06414 | gap 1, opp_overlap 5047375, overlap 5047369 TCTCGTGAAGAAAAA GGACGCTG TCGG CAACG-CC ACTTGCTTCGCATAC TERM 3852 5047832 - 5047862 + G 91 -16.8 -3.59698 | GGGGCGGCACTTCGG GCGTCACCCTCGGC TCC GCCGACGGCGACGC TTATGTCTACGATCC Acid345_4251 5044612 - 5049498 + | YD repeat-containing protein TERM 3853 5049544 - 5049554 + F 73 -5.4 -4.62783 | ATATCTAGTTCTGCT TCTC ACC GAGA TTTTTGGGGTAGCTA Acid345_4252 5050221 - 5050451 + | hypothetical protein TERM 3854 5050620 - 5050600 - f 84 -13.9 -3.14344 | CAGGTTTGTTAGGAA CGGCCGGCG GAT CGCCGGCTG ATAAGGAATCCCGAG TERM 3855 5051230 - 5051208 - f 71 -10.5 -3.28924 | opp_overlap 5051208 GATCGGTTTCGAGAA GCTCTCCGC AGTCG GCGGGGAGC TTTCTTTTGCTGGGA TERM 3856 5051208 - 5051230 + F 100 -12.7 -4.72007 | opp_overlap 5051208 GATCGGTTTCGAGAA GCTCTCCGC AGTCG GCGGGGAGC TTTCTTTTGCTGGGA TERM 3857 5051999 - 5052018 + F 100 -9.3 -4.98531 | GACGTTCGGCTTCGA TCCTCGC CCCCGC GCGAGGA TTTTTACTTTCCGCA TERM 3858 5052732 - 5052715 - g 84 -12.7 -3.63991 | TACGACCTTGAAGAA CTGGCGC GACA GCGCCAG TTCGAGATCGTCGCA Acid345_4253 5052637 - 5053242 + | resolvase-like protein Acid345_4254 5053242 - 5053640 + | hypothetical protein TERM 3859 5053675 - 5053652 - T 100 -13.8 -4.94058 | opp_overlap 5053654, overlap 5053654 CTAACTTAAACAAAA CAGGGCGCCG GAAA CGGCGCCCTT CACTAGCCCACAAGG TERM 3860 5053654 - 5053673 + T 100 -16.4 -3.05384 | opp_overlap 5053652 5053654 AACTTAAACAAAACA GGGCGCCG GAAA CGGCGCCC TTCACTAGCCCACAA TERM 3861 5053673 - 5053654 - T 100 -16.4 -4.08189 | opp_overlap 5053654, overlap 5053652 AACTTAAACAAAACA GGGCGCCG GAAA CGGCGCCC TTCACTAGCCCACAA Acid345_4255 5056062 - 5053804 - | hypothetical protein TERM 3862 5055571 - 5055559 - G 80 -2.6 -5.20333 | opp_overlap 5055562 CATCCAGAAGAAAAA GGCG TCGAG CACC TGCCGGCTACGTTGG Acid345_4256 5057245 - 5056064 - | hypothetical protein Acid345_4257 5058184 - 5057582 - | hypothetical protein Acid345_4258 5058810 - 5058220 - | hypothetical protein Acid345_4259 5059461 - 5058862 - | hypothetical protein TERM 3863 5058972 - 5058957 - G 72 -4.6 -4.57073 | opp_overlap 5058957 5058966 CATGCTCGTTAAAAA GCATCC GTGC GGCTGC TCCTGTCGAGGCGAT Acid345_4260 5060615 - 5059440 - | hypothetical protein Acid345_4261 5062531 - 5061143 - | hypothetical protein TERM 3864 5061372 - 5061384 + g 80 -4.7 -4.98531 | AAGGGTATGTGCTCT GGCAC ATT GCGCC TTTTTACTTTGAACG TERM 3865 5062915 - 5062938 + r 100 -13.8 -4.94058 | opp_overlap 5062917, overlap 5062917 CCTTGTGGGCTAGTG AAGGGCGCCG TTTC CGGCGCCCTG TTTTGTTTAAGTTAG TERM 3866 5062917 - 5062936 + r 100 -16.4 -4.08189 | opp_overlap 5062917, overlap 5062915 TTGTGGGCTAGTGAA GGGCGCCG TTTC CGGCGCCC TGTTTTGTTTAAGTT TERM 3867 5062936 - 5062917 - R 100 -16.4 -3.05384 | opp_overlap 5062917 5062915 TTGTGGGCTAGTGAA GGGCGCCG TTTC CGGCGCCC TGTTTTGTTTAAGTT Acid345_4262 5063348 - 5062950 - | hypothetical protein Acid345_4263 5063953 - 5063348 - | resolvase-like protein TERM 3868 5063858 - 5063875 + g 84 -12.7 -3.63991 | TGCGACGATCTCGAA CTGGCGC TGTC GCGCCAG TTCTTCAAGGTCGTA TERM 3869 5064591 - 5064572 - H 100 -9.3 -4.98531 | TGCGGAAAGTAAAAA TCCTCGC GCGGGG GCGAGGA TCGAAGCCGAACGTC TERM 3870 5065360 - 5065382 + H 71 -10.5 -3.28924 | opp_overlap 5065360 TCCCAGCAAAAGAAA GCTCCCCGC CGACT GCGGAGAGC TTCTCGAAACCGATC TERM 3871 5065382 - 5065360 - H 100 -12.7 -4.72007 | opp_overlap 5065360 TCCCAGCAAAAGAAA GCTCCCCGC CGACT GCGGAGAGC TTCTCGAAACCGATC TERM 3872 5065826 - 5065846 + H 83 -7.6 -4.67038 | gap 1, overlap 5065821 TCTCACCATTGCGGT CGAGC-AGC GACG GCTTGCTCG TTTTGGTTTTAGCAA Acid345_4264 5066200 - 5067726 + | DNA-cytosine methyltransferase TERM 3873 5067705 - 5067715 + F 70 -6.8 -4.13767 | opp_overlap 5067704 5067705 CGAGGTTGCAAAGAT GGTC GCC GACC TTTTGGGGTGACAAG Acid345_4265 5067732 - 5068166 + | T/G mismatch-specific endonuclease Acid345_4266 5068221 - 5069810 + | hypothetical protein Acid345_4267 5069782 - 5072481 + | endonuclease Acid345_4268 5072465 - 5073421 + | hypothetical protein Acid345_4269 5073537 - 5075501 + | hypothetical protein Acid345_4270 5075519 - 5076241 + | hypothetical protein Acid345_4271 5076550 - 5076287 - | hypothetical protein Acid345_4272 5077163 - 5076714 - | resolvase-like protein Acid345_4273 5077455 - 5077997 + | PadR family transcriptional regulator TERM 3874 5078515 - 5078502 - g 83 -5.9 -4.87665 | GGTCACCCAGAAAAA GCGGA CGTT CCCGC CGGCAAATGCCAGCA Acid345_4274 5078209 - 5078550 + | hypothetical protein TERM 3875 5079600 - 5079630 + G 81 -13.2 -3.57561 | overlap 5079601 GGAATTGGTTCCGGA ACCTGCGGCCTCGA TGA TCGCGGTCGCAGGA TTTGGCGGCTTGCGG TERM 3876 5079601 - 5079629 + G 87 -16.7 -2.74322 | overlap 5079600 GAATTGGTTCCGGAA CCTGCGGCCTCGA TGA TCGCGGTCGCAGG ATTTGGCGGCTTGCG Acid345_4275 5078992 - 5080173 + | phage integrase Acid345_4276 5082860 - 5080374 - | peptidase M1, membrane alanine aminopeptidase TERM 3877 5081196 - 5081181 - G 76 -3.2 -5.0133 | opp_overlap 5081181 CAGCGTCCCAAAAAA CGTCTT CACA AAGTCG TTCATTCCAAGGTGT Acid345_4277 5082952 - 5084358 + | TPR repeat-containing protein TERM 3878 5084390 - 5084359 - f 71 -8.6 -3.83226 | opp_overlap 5084359 5084356, overlap 5084349 5084356 5084360 AAGTACGGACAATAA CGGCCGCCGCCGAT ATTC ATTGGTGACGGCCA GCGAGTTGTGATACT Acid345_4278 5084427 - 5085188 + | serine phosphatase TERM 3879 5085586 - 5085569 - g 91 -7 -5.1861 | overlap 5085572 5085573 GTGACGACCAAAAAA CCATGG AGGCGG CCATGG CCGCCGGCGCGACGT TERM 3880 5085588 - 5085600 + G 76 -4.7 -4.72272 | opp_overlap 5085573 5085572, overlap 5085586 GGAGGCGGCCATGGC CGCCG GCG CGACG TTTTTCCTGCACAAG Acid345_4279 5085301 - 5085999 + | response regulator receiver protein TERM 3881 5087017 - 5087040 + G 74 -13.9 -2.57344 | opp_overlap 5087010, overlap 5087016 GATATCAATTCTACC GGCGAACCG GTGAAG CGGTTCGCC ATTGTCCGCGCAATG Acid345_4280 5086516 - 5087682 + | hypothetical protein Acid345_4281 5088417 - 5088674 + | hypothetical protein Acid345_4282 5089417 - 5088953 - | hypothetical protein Acid345_4283 5090852 - 5089677 - | hypothetical protein TERM 3882 5091094 - 5091112 + r 74 -7.4 -4.13304 | overlap 5091095 TGCGAGTGTGTGTTA ACCGAAGT ATA ACTTCGGG TTTTACGGGTAGTTT Acid345_4284 5093889 - 5091274 - | ABC efflux pump, inner membrane subunit TERM 3883 5092916 - 5092938 + g 74 -6.2 -4.46215 | overlap 5092917 5092926 ACGAGCGACTCGTGC AGCGGCAC GAGAACG GTGCCGCG TTCTTTTTCGGTGTC TERM 3884 5092926 - 5092941 + g 72 -4.7 -4.70659 | overlap 5092917 5092916 CGTGCAGCGGCACGA GAACG GTGCCG CGTTC TTTTTCGGTGTCGGG Acid345_4285 5094232 - 5093900 - | PadR family transcriptional regulator Acid345_4286 5094906 - 5094310 - | hypothetical protein TERM 3885 5095045 - 5095005 - R 72 -11.2 -3.08695 | gap 2, overlap 5095000 5095007 5095033 5095036 TGTAGACAAAGGAGA GAGT-CCCCG-CCCTGTCGC TAC GCGATAAGGACGGGGCACCC GGATTCGTGGGAGGA Acid345_4287 5095578 - 5095066 - | peptide deformylase Acid345_4288 5096770 - 5095589 - | chorismate synthase TERM 3886 5098246 - 5098287 + G 71 -11.5 -3.21276 | opp_overlap 5098246, overlap 5098244 ATCGGTAGGCGATAA CGTTGGGCGGCTTTCTCCG GTCA CGGAGACAGCGGTCTATCG TGTTGTACAGGAAGC Acid345_4289 5096984 - 5098642 + | GAF sensor signal transduction histidine kinase Acid345_4290 5098673 - 5099329 + | two component LuxR family transcriptional regulator Acid345_4291 5099362 - 5100177 + | response regulator receiver protein Acid345_4292 5100870 - 5100178 - | HAD family hydrolase TERM 3887 5100910 - 5100891 - R 93 -9.2 -4.72986 | opp_overlap 5100891 TACGCGCAGCAAAAA GCCCGGCC ACTC AGCCAGGC TTTCTTGCGAAAACG Acid345_4293 5101709 - 5100930 - | hypothetical protein TERM 3888 5101029 - 5101064 + g 71 -10.2 -3.53012 | overlap 5101030 TGCTCCGGCTGTGCC AGCGCCGCCACCGGCG AGAG CGCCGATCGCCGCGCC TTTGCCGCCACCGGC TERM 3889 5101030 - 5101063 + g 76 -13.7 -2.71712 | overlap 5101029 GCTCCGGCTGTGCCA GCGCCGCCACCGGCG AGAG CGCCGATCGCCGCGC CTTTGCCGCCACCGG Acid345_4294 5102954 - 5101827 - | metal dependent phosphohydrolase TERM 3890 5101907 - 5101927 + g 78 -8.9 -4.128 | overlap 5101910 5101911 TATCCGGTTCAGTCG CAGCGGCCG TAG CGGCCATTG TTTCTGTCTCGAACT TERM 3891 5101910 - 5101924 + g 71 -7 -4.18674 | overlap 5101907 5101911 CCGGTTCAGTCGCAG CGGCCG TAG CGGCCA TTGTTTCTGTCTCGA TERM 3892 5103036 - 5103026 - R 75 -6.8 -4.40804 | GAGCATGGGAGAAAA GCAC TTA GTGC AGAATTTTGCTGCGA Acid345_4295 5103284 - 5103054 - | hypothetical protein TERM 3893 5103433 - 5103414 - R 100 -12.8 -4.81249 | opp_overlap 5103413 5103412 TGCCAAATGGAAAAA CCCGGGCA TTTT CGCCCGGG CATTTACAAAACATT Acid345_4296 5105177 - 5103453 - | sigma 38, RpoS TERM 3894 5103827 - 5103856 + g 82 -10.7 -4.21974 | GCACTTTGCGGACCT TCGCCACGGGGAT ATCC ATCCGCTTGGCGA TTTCTTCGCTGCTCG TERM 3895 5104508 - 5104520 + g 100 -9.1 -5.59534 | TCCAACGGACCTTGC GCACG TCG CGTGC TTTTTTCTTGTCCTT Acid345_4297 5107435 - 5105513 - | DNA primase TERM 3896 5106263 - 5106274 + g 90 -7.2 -5.04385 | CAGTGCGTACGCATA GGCC TCAC GGCC TTTTTTGCGAATATA TERM 3897 5106646 - 5106631 - G 82 -10.4 -4.16842 | overlap 5106614 GCGACTTCGAATAAA TCGCCG TCTC CGGCGA GTTCAGATATTTCGG Acid345_4298 5108935 - 5107490 - | 2-nitropropane dioxygenase, NPD Acid345_4299 5111486 - 5109048 - | MutS2 family protein TERM 3898 5111157 - 5111203 + g 81 -12.2 -3.78022 | opp_overlap 5111156 5111154 5111157, overlap 5111158 AGGCGAAATCAAGAT CTCGCGCCACTCTGCTGCGCGT TCC GCGAGTAGCAGGATGGTGCGAA TTTCGTCCATCTCCA TERM 3899 5111158 - 5111202 + g 87 -15.7 -2.86492 | opp_overlap 5111157 5111156 5111154, overlap 5111157 GGCGAAATCAAGATC TCGCGCCACTCTGCTGCGCGT TCC GCGAGTAGCAGGATGGTGCGA ATTTCGTCCATCTCC Acid345_4300 5111600 - 5112631 + | delta-aminolevulinic acid dehydratase Acid345_4301 5113068 - 5112628 - | MarR family transcriptional regulator TERM 3900 5112658 - 5112675 + g 87 -12.7 -3.88559 | GATTGCATCCATCTT CTCGGCG ATCT CGCCGAG TTTCTGAACATCGTT TERM 3901 5113375 - 5113362 - g 72 -6.7 -4.31379 | ACGAACGTATGAAAA CTTCG GGAG CGAAG TTCGAGGATGAGCCG Acid345_4302 5113118 - 5113486 + | methylmalonyl-CoA epimerase TERM 3902 5113496 - 5113509 + F 71 -4.5 -4.64144 | CGCTAGACTTTGACG CAGGC ATGG GCTTG TTTTTCGGCATTGTT Acid345_4303 5113501 - 5113761 + | hypothetical protein Acid345_4304 5113843 - 5115258 + | dihydrolipoamide dehydrogenase TERM 3903 5115274 - 5115295 + F 100 -15.1 -4.06055 | opp_overlap 5115252 CTCCTCCTACTGCAG GGGCGCGGC GAGA GCTGCGCCC TTTGCTTTGCAGGCT Acid345_4305 5115354 - 5116109 + | lipoate-protein ligase B Acid345_4306 5116174 - 5117565 + | glucuronate isomerase TERM 3904 5118035 - 5118053 + G 82 -13.8 -3.2827 | opp_overlap 5118032 TTCCGGCGCAAACGT CGGCGCGG TTC TCGCGCCG TTGATCGTTCCATGG TERM 3905 5118519 - 5118531 + G 75 -4.1 -4.83169 | CTGGTTTGCGCGATT TTGGT AGT GCCAA TTTTTATCGCGAGCT Acid345_4307 5117565 - 5118857 + | major facilitator transporter Acid345_4308 5118854 - 5120125 + | hypothetical protein TERM 3906 5120191 - 5120230 + G 71 -10.6 -3.48593 | gap 1 ACAACTGGCATCGGA CG-CGCCATCAGCTTCGGC CTC GCCGATGCAGGTGCCGACG TTGTCTCCACCGCTC TERM 3907 5120688 - 5120661 - g 72 -4.7 -4.59853 | opp_overlap 5120682 GGAATGGTCGAAAAA GGGCGTGACCG TGAACG CGATCGCCCCC GGAGTGTTTCGGACT Acid345_4309 5120125 - 5120898 + | short-chain dehydrogenase/reductase SDR Acid345_4310 5120920 - 5121876 + | sugar phosphate isomerase/epimerase Acid345_4311 5121887 - 5123200 + | dehydrogenases related protein TERM 3908 5123308 - 5123288 - g 77 -11.9 -3.51708 | TATGGGCCAAACCAA GCCGACAAA CCA TTCGTCGGC GATCAAGCTCGGCAT Acid345_4312 5123193 - 5124044 + | sugar phosphate isomerases/epimerases Acid345_4313 5124237 - 5124593 + | DGPFAETKE domain-containing protein TERM 3909 5125795 - 5125812 + GT 72 -11.3 -3.14344 | overlap 5125798 AATCGCAAGTGCTCG GAACCGG AGCG CCGGTTC TTACTGCGACAGCTG Acid345_4314 5124565 - 5125842 + | RNA polymerase ECF-subfamily sigma factor Acid345_4315 5126214 - 5125843 - | endoribonuclease L-PSP Acid345_4316 5126441 - 5127457 + | GTP cyclohydrolase subunit MoaA Acid345_4317 5127738 - 5128850 + | quinolinate synthetase Acid345_4318 5128854 - 5129285 + | hypothetical protein Acid345_4319 5130119 - 5129292 - | ABC transporter, ATPase subunit Acid345_4320 5130904 - 5130119 - | ABC nitrate/sulfonate/bicarbonate transporter, inner membrane subunit TERM 3910 5130610 - 5130590 - G 70 -4.6 -4.47183 | overlap 5130586 5130605 GACGAGGGAAAGAAA GCGCAGCT TACTC AACAGCGC GACCACCGGCCGAAA Acid345_4321 5132770 - 5130953 - | OmpA/MotB family outer membrane protein Acid345_4322 5133913 - 5132810 - | hypothetical protein TERM 3911 5133938 - 5133953 + r 74 -8.2 -3.99592 | opp_overlap 5133938 CTCAACCTTTCAAGA GCGCGG CGTA CTGCGC TTTCTGCTGCTCGAT Acid345_4323 5134589 - 5133924 - | hypothetical protein TERM 3912 5134799 - 5134811 + G 72 -4.8 -4.5954 | GGGACATGTTTTTGG CGGT TTTGC ACCG TTTTCTCTGGTATCC Acid345_4324 5134795 - 5135232 + | hypothetical protein Acid345_4325 5135674 - 5135237 - | hypothetical protein TERM 3913 5135501 - 5135487 - G 75 -5.6 -4.71186 | overlap 5135489 AGCACGAATACAAAA GCCGAC ATC GTCGCC AACGCCATCAGCCCG Acid345_4326 5136475 - 5135678 - | beta-lactamase-like Acid345_4327 5136881 - 5136552 - | hypothetical protein Acid345_4328 5137729 - 5136881 - | 3-hydroxyacyl-CoA dehydrogenase Acid345_4329 5138470 - 5137784 - | FHA domain-containing protein Acid345_4330 5139294 - 5138452 - | protein serine/threonine phosphatases TERM 3914 5139419 - 5139442 + r 72 -11 -3.04443 | opp_overlap 5139419, overlap 5139414 GCCACTGCAAGAAAA TGGCCGCC AGTACATC GGCGGCCA TATCGTTATTCTGCG TERM 3915 5139442 - 5139419 - R 100 -11.7 -4.65916 | opp_overlap 5139419 5139414 GCCACTGCAAGAAAA TGGCCGCCA GTACAT CGGCGGCCA TATCGTTATTCTGCG Acid345_4331 5139889 - 5139461 - | hypothetical protein Acid345_4332 5141338 - 5139896 - | F0F1 ATP synthase subunit beta Acid345_4333 5142390 - 5141353 - | ATP synthase F1, gamma subunit Acid345_4334 5143932 - 5142394 - | F0F1 ATP synthase subunit alpha TERM 3916 5143097 - 5143060 - G 70 -4.7 -4.52589 | gap 1, overlap 5143062 GCTGTGCAGATAAAA CACGTCGCCCGGATACGC CTC GCGT-CCCGGTGGACGCC GCAGCAGCAGCGAAA TERM 3917 5143095 - 5143062 - G 75 -9.5 -3.87627 | gap 1, overlap 5143060 TGTGCAGATAAAACA CGTCGCCCGGATACGC CTC GCGT-CCCGGTGGACG CCGCAGCAGCAGCGA TERM 3918 5143965 - 5143986 + r 74 -7.9 -4.15114 | overlap 5143973 AAGAAATCGGTCTGC CGGAGCGCT AACT GGCGCTCAG TTGTTCTTTGATCTT Acid345_4335 5144511 - 5143972 - | ATP synthase F1, delta subunit Acid345_4336 5145299 - 5144514 - | H+-transporting two-sector ATPase, B/B' subunit Acid345_4337 5145775 - 5145296 - | H+-transporting two-sector ATPase, B/B' subunit TERM 3919 5146028 - 5146074 + r 100 -14.4 -4.55798 | opp_overlap 5146004 5146028 CACTTCAGGATCGAA CGGGCTTGAGGCTAAGGACTTG TCA CCGCTCCTTAGCAACAAGCCCG TTTTAATTTCCACTC TERM 3920 5146074 - 5146028 - R 76 -12.4 -3.09834 | opp_overlap 5146028, overlap 5146004 CACTTCAGGATCGAA CGGGCTTGAGGCTAAGGA CTTGTCACCGC TCCTTAGCAACAAGCCCG TTTTAATTTCCACTC Acid345_4338 5147816 - 5146227 - | peptidase M28 TERM 3921 5146533 - 5146511 - G 78 -3.2 -5.06414 | opp_overlap 5146510, overlap 5146512 CGCTGCGAATAAAAA TGTTCCGCAG CGG CTGCGGGTCG GGTTGTACCTGCACG TERM 3922 5147905 - 5147891 - H 72 -11.4 -3.06183 | GTCATCCTGAGCGAA GCGTGC GCA GCACGC GCAGTCGAAGGACCC TERM 3923 5148384 - 5148394 + G 70 -2.4 -4.8048 | TTCTCCAAGTTGAAC CGCG TCA CGCC TTTTTGATCTCGACC Acid345_4339 5148071 - 5149030 + | hypothetical protein TERM 3924 5149334 - 5149319 - T 100 -11.8 -4.77757 | opp_overlap 5149332 CCCCAAAAAGCAAAA GCCCGC GTCA GCGGGC GGCACGACTCCCTTC Acid345_4340 5150733 - 5149378 - | GTP-binding protein, HSR1-related Acid345_4341 5151106 - 5150816 - | host factor Hfq TERM 3925 5151230 - 5151219 - H 74 -7.2 -4.07885 | overlap 5151206 CACGCGTTGCTAAAA CGCG ACAA CGCG AGCACAAGTACGATA TERM 3926 5152001 - 5151987 - g 81 -4.2 -5.10933 | overlap 5151989 GCATGCAAAAGAAAA TCGTCC GCT GGACTA CGATCAACGTCGCCA Acid345_4342 5151398 - 5152159 + | hypothetical protein Acid345_4343 5152198 - 5153379 + | DegT/DnrJ/EryC1/StrS aminotransferase Acid345_4344 5153574 - 5153939 + | hypothetical protein TERM 3927 5154282 - 5154267 - g 74 -6.1 -4.42653 | AGGTCATCCACAAAA TCGGC GGCGAA GCCGA ACTCCTCTCGCACGA TERM 3928 5154500 - 5154524 + G 75 -5.5 -4.57569 | GAGCAGTACGTCTTC GCCTGCGGCGC CTG GCTCCCCAAGC TTTTTCCCGACATCC TERM 3929 5154678 - 5154655 - g 74 -6 -4.41494 | gap 1, overlap 5154657 CATGGGCAACGAAAA CTGGG-ATGCC TAC GGCATGCCTAG CCTCGAAAACCGCGG Acid345_4345 5153936 - 5155027 + | FAD dependent oxidoreductase Acid345_4346 5156651 - 5154984 - | hypothetical protein TERM 3930 5156992 - 5156974 - R 100 -13.1 -5.07652 | opp_overlap 5156974 CCGCCCAAAAGAAAA GCCGGGC TCTAT GCCCGGC TCTTAAAAATTCCGC TERM 3931 5156974 - 5156992 + r 81 -13.1 -3.06261 | opp_overlap 5156974 CCGCCCAAAAGAAAA GCCGGGC TCTAT GCCCGGC TCTTAAAAATTCCGC Acid345_4347 5157234 - 5157010 - | hypothetical protein Acid345_4348 5158729 - 5157497 - | hypothetical protein TERM 3932 5158173 - 5158199 + g 74 -11.5 -3.63569 | gap 1 TTCACCGTCTGCTTC GGCGTGC-CGCC CCTC GGCGCGCTCGCC TTCTTCAAAACTTCG TERM 3933 5158779 - 5158811 + H 72 -11.3 -3.01712 | overlap 5158774 AATTCAATTTCGGGT GCCCCATGTCTCG CGATTTT CGAGACGTGGGGA TGTTCGCCAAGCGGC Acid345_4349 5159019 - 5159573 + | hypothetical protein TERM 3934 5159590 - 5159622 + F 88 -11.3 -4.14243 | overlap 5159585 5159591 CAAATCCTTCTGGGT GCCCCATGTCTCG CGATTTT CGAGACGTGGGGA TTTTCCCCTCGCGTC TERM 3935 5159591 - 5159621 + F 91 -14.8 -3.08224 | overlap 5159585 5159590 AAATCCTTCTGGGTG CCCCATGTCTCG CGATTTT CGAGACGTGGGG ATTTTCCCCTCGCGT TERM 3936 5160682 - 5160656 - g 86 -5 -5.26119 | CGTCGAAAAACAAAA GACCGCGCCG ACTCCAA CGCCGCAGCC GCAAGCCGCGCAACC Acid345_4350 5159799 - 5161466 + | 2-oxoglutarate dehydrogenase E2 component TERM 3937 5161518 - 5161480 - T 74 -7.2 -4.14615 | opp_overlap 5161485 5161495 AAAAAGTTTGGAAAA GGGTGCCCCACTCTACGC AAA GCGTAGGGTGGGGTTTTC GCTTTGTGTTTCGGA TERM 3938 5161485 - 5161513 + T 100 -21.1 -4.42081 | opp_overlap 5161480, overlap 5161495 GTTTGGAAAAGGGTG CCCCACTCTACGC AAA GCGTAGGGTGGGG TTTTCGCTTTGTGTT TERM 3939 5161578 - 5161564 - T 72 -11.4 -3.06302 | ATCATCCTGAGCGAA GCGTGC GAA GCACGC GGAGTCGAAGGACCC Acid345_4351 5162255 - 5161617 - | hypothetical protein TERM 3940 5162197 - 5162227 + g 100 -18.4 -4.56597 | TGCTGCCTTTGGGTG CCCCACGTCTCG CGCTTTC CGAGACGTGGGG TTTTTCCCAAGCGGC Acid345_4352 5162572 - 5162318 - | hypothetical protein TERM 3941 5162657 - 5162602 - R 79 -3.2 -5.20328 | gap 1 TTCTAAAAAAACAAA GAGCCAGGAAGCCCTCTCCCATGCC GTCATCG GGCACGCG-GCAAGCTCCCCAACTC TTTAACTCAAAAAAT TERM 3942 5162686 - 5162672 - R 90 -5.6 -5.15969 | opp_overlap 5162680, overlap 5162673 CTTTAACTCAAAAAA TGTGGG TGC CCCACC CTTCCCGAAGGGAGG TERM 3943 5162685 - 5162673 - R 70 -9.1 -3.68859 | opp_overlap 5162680, overlap 5162672 TTTAACTCAAAAAAT GTGGG TGC CCCAC CCTTCCCGAAGGGAG TERM 3944 5162680 - 5162707 + r 84 -13.4 -3.14132 | opp_overlap 5162673 5162672 CAAAAAATGTGGGTG CCCCACCCTTCC CGAA GGGAGGGTGGGA TTGCTGACGCACGCG Acid345_4353 5163013 - 5162765 - | hypothetical protein Acid345_4354 5165277 - 5163001 - | hypothetical protein Acid345_4355 5165305 - 5165616 + | hypothetical protein TERM 3945 5165682 - 5165668 - f 72 -11.4 -3.06183 | GTCATCCTGAGCGAA GCGTGC GAA GCACGC GAAGTCGAAGGATTC Acid345_4356 5165931 - 5166131 + | cold-shock DNA-binding protein family protein TERM 3946 5166147 - 5166196 + T 83 -14.5 -2.77232 | gap 1, opp_overlap 5166161, overlap 5166103 5166161 CAGCACGTCCCCAGC TTGCATTTCGAAAAGGGCAGCC CCCACCA GGCTGCCCTTTTCGCA-TGCAC TAATGTTCCCTCTGT TERM 3947 5166183 - 5166161 - T 95 -12.7 -4.11216 | opp_overlap 5166147 5166161 CTTGCATTTCGAAAA GGGCAGCCC CCACC AGGCTGCCC TTTTCGCATGCACTA TERM 3948 5166161 - 5166183 + T 91 -12 -4.14243 | opp_overlap 5166161, overlap 5166147 CTTGCATTTCGAAAA GGGCAGCC CCCACCA GGCTGCCC TTTTCGCATGCACTA Acid345_4357 5167317 - 5166346 - | hypothetical protein Acid345_4358 5168224 - 5167808 - | hypothetical protein Acid345_4359 5168811 - 5168224 - | hypothetical protein TERM 3949 5168767 - 5168753 - G 73 -11.4 -3.40775 | overlap 5168751 ATCTCCACCCAAACA TCCGGC ACC GCCGGA TCCAACCCATACTGC TERM 3950 5168864 - 5168896 + r 72 -11.3 -3.09878 | overlap 5168859 TTTCCACGGCCGGGT GCCCCATGTCTCG CGCCTTT CGAGACGTGGGGA TGTTCACTCCGTCCC TERM 3951 5169045 - 5169030 - R 95 -10.4 -4.55887 | overlap 5169024 CTCCAAAAACAGAAA GCCTGC TTTA GCAGGC GACACGGCAACGCTC Acid345_4360 5170066 - 5169095 - | hypothetical protein TERM 3952 5170127 - 5170107 - R 100 -14.7 -5.10163 | AACCCCAAAACAAAA CGGCGAGCT CAA AGCCCGCCG TCCCCACTCCTGTCA TERM 3953 5170177 - 5170154 - R 76 -11.8 -3.06183 | overlap 5170157 GTCATCCTGAGCGAA GAATCCGGAC ACCG ATCCGGATTC GCAGTCGAAGGACCC Acid345_4361 5170633 - 5170319 - | hypothetical protein TERM 3954 5170683 - 5170669 - R 72 -11.4 -3.06183 | opp_overlap 5170681 GTCATCCTGAGCGAA GCACGC GAA GCGTGC GCAGTCGAAGGACCC Acid345_4362 5171307 - 5170816 - | hypothetical protein Acid345_4363 5172612 - 5171347 - | hypothetical protein TERM 3955 5172672 - 5172654 - H 100 -12.4 -4.54727 | opp_overlap 5172653 5172652 CGCCCTAAAGCAAAA CGCTCCCA TCC CGGGAGCG CCTTTTCACAATCTC Acid345_4364 5172725 - 5173468 + | hypothetical protein TERM 3956 5173494 - 5173470 - T 70 -10 -3.36228 | overlap 5173474 CCGAGCACAAATAGA GAAAGCTCCC GTCAA GGGAGCTATC ACGCCTGGTTGGCGC TERM 3957 5173490 - 5173474 - T 84 -9.4 -4.31166 | overlap 5173470 GCACAAATAGAGAAA GCTCCC GTCAA GGGAGC TATCACGCCTGGTTG Acid345_4365 5173901 - 5173518 - | S23 ribosomal TERM 3958 5173997 - 5173979 - R 72 -12.4 -2.67747 | opp_overlap 5173978 5173977, overlap 5173978 GCGCCACATCACAAT GCGACCCA ATT CGGGTCGC CGTTTGACCTCACAT Acid345_4366 5175552 - 5174062 - | hypothetical protein TERM 3959 5175278 - 5175268 - G 90 -6.8 -5.10461 | opp_overlap 5175276, overlap 5175270 CGTACTCAAGAAAAA TCGC GAC GCGA CATACGTCGTAATTC Acid345_4367 5178003 - 5175580 - | hypothetical protein TERM 3960 5177987 - 5177973 - G 100 -12.8 -5.4505 | CCGCCCAACAAAAAA GCCGCC CCA GGCGGC CACCCAATCTAGTCA TERM 3961 5178219 - 5178203 - R 72 -3.7 -4.75372 | overlap 5178204 5178208 ACCACGGACCAAAAA TTAAAGC CCG GCTTTAG CCGGGCGGTGCGGCC TERM 3962 5178225 - 5178208 - R 100 -14.1 -4.35327 | opp_overlap 5178222, overlap 5178204 5178203 GGACCAAAAATTAAA GCCCGGC TTTA GCCGGGC GGTGCGGCCTCTGCT Acid345_4368 5180935 - 5178269 - | hypothetical protein TERM 3963 5181102 - 5181073 - R 100 -23.7 -5.09895 | CAGTGACGCAAAAAA GCGAAGCCCGGCA TTTT TGCCGGGCTTCGC ACAGGAGGTACTCGC TERM 3964 5181138 - 5181176 + r 100 -13.9 -4.82901 | overlap 5181139 ACGTCACGTTTGGGT GCCTCACTCTATCGCCG CTTTT TGGCGATAGGGTGGGGG TTTTTCTCAACCAAC TERM 3965 5181139 - 5181175 + r 100 -17.4 -3.49419 | overlap 5181138 CGTCACGTTTGGGTG CCTCACTCTATCGCCG CTTTT TGGCGATAGGGTGGGG GTTTTTCTCAACCAA Acid345_4369 5181634 - 5181146 - | dual specificity protein phosphatase Acid345_4370 5182316 - 5181672 - | hypothetical protein TERM 3966 5181972 - 5182007 + g 95 -6.8 -5.5208 | gap 1, opp_overlap 5181984, overlap 5181964 GTCGTCGTCGGCTGG CCGCCGATTACATCCCT CGC AGGGTT-TCTTCGGCGG TTTTTTCTCTTCTCC TERM 3967 5182383 - 5182364 - R 100 -12.8 -5.33405 | opp_overlap 5182364 CCCACCAAATAAAAA GCCCGGCG TCTT CGCCGAGC TTTCACTGCAAATAA TERM 3968 5182364 - 5182383 + r 76 -10.6 -3.65351 | opp_overlap 5182364 CCCACCAAATAAAAA GCCCGGCG TCTT CGCCGAGC TTTCACTGCAAATAA TERM 3969 5182681 - 5182662 - R 100 -12.8 -5.06089 | opp_overlap 5182673 AAACTACAAAGAAAA GGGGCGCA TGCT CGCGCCCC TCGATCACTTCCAGA Acid345_4371 5183339 - 5182701 - | hypothetical protein Acid345_4372 5183989 - 5184705 + | hypothetical protein Acid345_4373 5184892 - 5186016 + | PGAP1-like Acid345_4374 5186443 - 5186048 - | hypothetical protein Acid345_4375 5186542 - 5186754 + | hypothetical protein TERM 3970 5186770 - 5186789 + T 100 -15 -4.51743 | opp_overlap 5186770 GCGCGCAAACGAAAA GGCACGGC GCGC GCCGTGCC TTTGTTTCATCGTGA TERM 3971 5186789 - 5186770 - T 100 -15 -4.54727 | opp_overlap 5186770 GCGCGCAAACGAAAA GGCACGGC GCGC GCCGTGCC TTTGTTTCATCGTGA Acid345_4376 5188124 - 5186811 - | ABC efflux pump, inner membrane subunit Acid345_4377 5189360 - 5188125 - | ABC efflux pump, inner membrane subunit Acid345_4378 5191063 - 5189570 - | hypothetical protein TERM 3972 5190215 - 5190194 - G 81 -2.9 -5.20781 | GACCACAAAACAAAA GCCGCCG TAATAGAC CAGCGAC TTGCAGAGCGTGGTG TERM 3973 5191028 - 5191017 - G 83 -5.8 -4.90778 | overlap 5191019 GCCAGCCAAAGAAAA TCGC GCGC GCGA AAGCGTCTGCGCTCC Acid345_4379 5191450 - 5191124 - | hypothetical protein Acid345_4380 5194216 - 5191514 - | TPR repeat-containing protein TERM 3974 5192915 - 5192947 + g 73 -11.1 -3.38786 | GCTGTCGGTGAGCGC TGCGCGCACGGCGGC CTC GACGTCGGGCGCCCA TTCCTGTTCGATCTC TERM 3975 5193353 - 5193368 + g 71 -6.8 -4.18018 | GAGCAGCTTGAGCGC CGGCAG GAAC TTGCCG TTTTGCATCAGCGCA Acid345_4381 5195523 - 5194729 - | hypothetical protein TERM 3976 5195319 - 5195305 - G 76 -2.8 -5.00616 | TTGCCCGTCAAAAAA CTCG GTGCGGA CGAG AGTGCCTGCGTCATC Acid345_4382 5196076 - 5195642 - | hypothetical protein Acid345_4383 5196445 - 5196984 + | hypothetical protein Acid345_4384 5197112 - 5198131 + | transposase IS116/IS110/IS902 Acid345_4385 5199106 - 5198522 - | hypothetical protein TERM 3977 5199124 - 5199111 - R 72 -3.8 -4.69326 | AGACGCAACATAAAA CACC TGGGAC GGTG GCACGACGAGGCGTT Acid345_4386 5200757 - 5199273 - | hypothetical protein TERM 3978 5199794 - 5199806 + g 75 -10.5 -3.74224 | opp_overlap 5199794 AGATGTGCCAACCCA CCGGC ACC GCCGG TTTCGCTGCTTTGAC Acid345_4387 5202275 - 5200767 - | hypothetical protein Acid345_4388 5203865 - 5202294 - | ypothetical protein Acid345_4389 5204268 - 5204930 + | PadR family transcriptional regulator TERM 3979 5206132 - 5206149 + T 70 -9.9 -3.32963 | TCCTTCGACTGCGAA TCCGGAT CGTT ATCCGGA TTCTCCGCTCAGGAT Acid345_4390 5208989 - 5206173 - | serine/threonine protein kinase TERM 3980 5206572 - 5206556 - G 71 -10.1 -3.53012 | overlap 5206535 TGCCGTCGGGCGAAA CAGCGTG GCC CACGCCG ATGCCGAACCCTCTT TERM 3981 5206620 - 5206652 + g 75 -9.7 -3.80573 | overlap 5206621 CACGGTTTCCTGTTT TCCGCCGTCGATGGG AAC CCTGGCGACGGTGGC TTTGCTCGTGGTCGG TERM 3982 5206621 - 5206651 + g 74 -13.2 -2.88023 | overlap 5206620 ACGGTTTCCTGTTTT CCGCCGTCGATGGG AAC CCTGGCGACGGTGG CTTTGCTCGTGGTCG TERM 3983 5207907 - 5207889 - G 75 -10.2 -3.63627 | CTCGTAGATCCCAAA GCCGCCCG CAC CGAGCAGC CCCAGCGCGACTACG Acid345_4391 5211833 - 5209086 - | serine/threonine protein kinase Acid345_4392 5214617 - 5211942 - | serine/threonine protein kinase TERM 3984 5214565 - 5214519 - G 71 -7.3 -4.2528 | gap 1, opp_overlap 5214519 5214524 CTTCAATGCAACAAA GCGGCGCAGGCG-CGTGT CTTCTGCCTTGT ACACGACGCCCATGCCGC CGCCGCCGAGTTTCT TERM 3985 5214630 - 5214677 + r 86 -12 -3.84266 | gap 1, overlap 5214625 CAAGGTCCGTCCTTA TTTCATCAGGTGGTTGA-GCGCG GTA CGCGCTTCGGCCACCTGTGGCAA TTTCGTGTGCGATGT Acid345_4393 5217686 - 5214627 - | TPR repeat-containing serine/threonin protein kinase TERM 3986 5215542 - 5215529 - G 70 -3.7 -4.63218 | GGCCGGCGAAGAAAA GGGCG TCGC CGCGC GTGTCGAACGGATTC Acid345_4394 5218093 - 5218452 + | PadR family transcriptional regulator TERM 3987 5218987 - 5219023 + G 70 -4.5 -4.54205 | gap 1, overlap 5218987 5218989 CCGAGGGCGGCAAGC TGCC-CGAGATGATTG ACTCAG CAAGCATCTCGTGGAA TTTCTTTCGTGTGCT TERM 3988 5219627 - 5219592 - g 71 -8.3 -4.00042 | opp_overlap 5219603 5219609, overlap 5219595 GCGCGCAGCAAAGAA CATGCGATCCGC-GCCG CGCT CGGCGGCAG-TCGCTTG CGCCTGTTGCGCGAA Acid345_4395 5218449 - 5221088 + | ABC efflux pump, inner membrane subunit TERM 3989 5221209 - 5221225 + T 84 -13.7 -3.06183 | AAAGTGTTCGACTCC GTCGCGC TGC GCGCGAC TTCGCTCAGGATGAC Acid345_4396 5223739 - 5221271 - | TPR repeat-containing serine/threonin protein kinase TERM 3990 5223988 - 5224031 + G 79 -5.3 -4.84359 | gap 2, overlap 5223990 TGGATTGGCGCTGCA CTTTCTGCGCGATCGC--CCG GCAG CGGAAGAGATTGCGCAGGATG TTTTTCTCGCGCTGC Acid345_4397 5223968 - 5224438 + | ECF subfamily RNA polymerase sigma-24 factor TERM 3991 5224535 - 5224499 - f 100 -14.6 -3.86311 | gap 2 AGATGGAAAGTCAAA GT-CCCCG-CCCTATCGC TTC GCGATAAGGACGGGGCAC CCAGAACCGGAGAGA Acid345_4398 5224556 - 5224897 + | hypothetical protein TERM 3992 5225324 - 5225288 - g 73 -2.9 -4.74504 | gap 1, opp_overlap 5225291 5225319, overlap 5225291 AGGTGAACGGAAAAA TGACGGGGCT-GGCGG TGATCG CCGCGGAGGCCCGTGA ATTCACGCTCGTCTA TERM 3993 5225393 - 5225403 + G 70 -4.6 -4.42386 | overlap 5225392 TGGGTGGACAGTTTG GCGT GCC GCGC TTTTATGGGTCGAAC Acid345_4399 5224894 - 5225457 + | hypothetical protein Acid345_4400 5225454 - 5225966 + | hypothetical protein TERM 3994 5226003 - 5226021 + F 100 -13.1 -4.63048 | TCGCGAACGCCCACC GCCCGGC CAAAA GCCGGGC TTTCTTGTTTCTGAC TERM 3995 5226272 - 5226302 + G 70 -12 -2.78816 | gap 1 TCCAACACGTGGCGA TCGTGGT-GCTCG AAAATG CGAGCTACCACGA TGTGATCGGCAATAC Acid345_4401 5226133 - 5227065 + | phosphoesterase Acid345_4402 5227594 - 5227094 - | hypothetical protein Acid345_4403 5228579 - 5227620 - | metal dependent phosphohydrolase TERM 3996 5228776 - 5228745 - R 100 -11.6 -5.13343 | gap 1, opp_overlap 5228772, overlap 5228772 GAAGGCAAAAGAAAA CCCCGCCC-TATTGC TAT GCGATAAGGACGGGG CACCCAGCTTGGTTA Acid345_4404 5230606 - 5228789 - | GTP-binding protein TypA Acid345_4405 5230831 - 5231313 + | TonB-like protein TERM 3997 5231423 - 5231394 - T 84 -12.9 -3.36538 | opp_overlap 5231394 CAGACAAATTAGGAA GGGTGCTGTCGGT ATCA ATCGACAACACCC TTTTTGTTTTGCTCG TERM 3998 5231394 - 5231423 + T 100 -12.9 -5.50723 | opp_overlap 5231394 CAGACAAATTAGGAA GGGTGCTGTCGGT ATCA ATCGACAACACCC TTTTTGTTTTGCTCG Acid345_4406 5234281 - 5231450 - | peptidase M16-like Acid345_4407 5234513 - 5235469 + | hypothetical protein Acid345_4408 5236577 - 5235534 - | hypothetical protein TERM 3999 5236932 - 5236955 + H 73 -5.4 -4.58395 | gap 1, overlap 5236929 ACAAAGAAGTGGCCA GTT-CGGCAAT TGG ATTGCTGCAAC TTTTTGGGCCCTCAC TERM 4000 5237414 - 5237443 + G 100 -8.5 -5.0133 | opp_overlap 5237417 5237419, overlap 5237417 5237419 CACAAAGAGCGATAA CAAGAGCCAGGCG AAAC TGCCTGGCTACTG TTTTTTGCAAGCCTC TERM 4001 5237417 - 5237441 + G 78 -8.6 -4.13561 | gap 1, opp_overlap 5237417 5237419, overlap 5237414 5237419 AAAGAGCGATAACAA G-AGCCAGGCG AAAC TGCCTGGCTAC TGTTTTTTGCAAGCC TERM 4002 5237438 - 5237419 - g 71 -10.7 -3.4997 | opp_overlap 5237417 5237414 5237419, overlap 5237417 AGAGCGATAACAAGA GCCAGGC GAAACT GCCTGGC TACTGTTTTTTGCAA Acid345_4409 5237367 - 5238020 + | hypothetical protein Acid345_4410 5238085 - 5238717 + | thiamine monophosphate synthase TERM 4003 5238740 - 5238754 + F 72 -11.4 -3.06183 | GGGTCCTTCGACTGC GCACGC TTC GCGTGC TTCGCTCAGGATGAC TERM 4004 5239158 - 5239143 - g 80 -4.6 -4.88407 | TGATCGAAGCAAAAA CAGGGC TGAA GACCTG CAACATCGCGCAACC TERM 4005 5239621 - 5239651 + G 71 -10.4 -3.48276 | opp_overlap 5239592 5239616 GATCATCAATGCTGC GCCGTATCCGGCGT GCG ATGCGGGATACGAC TTCTATGCGAAGGCG Acid345_4411 5238830 - 5239798 + | hypothetical protein Acid345_4412 5241306 - 5239783 - | membrane bound O-acyl transferase, MBOAT TERM 4006 5241338 - 5241352 + r 81 -12.8 -3.06183 | GGGTCCTTCGACTGC GCGGCC TTC GGCCGC TTCGCTCAGGATGAC Acid345_4413 5241741 - 5241394 - | membrane protein of unknown function Acid345_4414 5243146 - 5241905 - | ABC efflux pump, inner membrane subunit TERM 4007 5243200 - 5243171 - R 74 -7.8 -4.13341 | opp_overlap 5243170 5243169 5243167 5243172, overlap 5243172 ATAGATTAAATGAAA GGGGTGGGGGAT GCGGAG ATCCTCCACCCT CGGTTTCTTATGCGC TERM 4008 5243199 - 5243172 - R 72 -11.3 -3.0692 | opp_overlap 5243170 5243169 5243167 5243172, overlap 5243171 TAGATTAAATGAAAG GGGTGGGGGAT GCGGAG ATCCTCCACCC TCGGTTTCTTATGCG TERM 4009 5243172 - 5243199 + r 79 -13.5 -2.78523 | opp_overlap 5243172 5243171, overlap 5243170 5243169 5243167 TAGATTAAATGAAAG GGGTGGGGGAT GCGGAG ATCCTCCACCC TCGGTTTCTTATGCG TERM 4010 5243218 - 5243251 + r 77 -7.3 -4.35524 | GTTTCTTATGCGCCT TGGCGGGCCTCGTCT AGCT GGACGGGGACTACCA TTTTGCGTTTGGCGC Acid345_4415 5244371 - 5243208 - | peptidase S1 and S6, chymotrypsin/Hap TERM 4011 5244549 - 5244579 + G 71 -7.5 -4.11216 | opp_overlap 5244537 5244564, overlap 5244550 GAAGGGGCACTATTT TGCCCGCAAGAAC AACCG GTTCTGGCCGGCG TTTTCGGCCTCGCGA TERM 4012 5244890 - 5244904 + G 83 -5.6 -4.98255 | opp_overlap 5244886 5244890, overlap 5244890 5244891 TCCAGAACGAACGGA TCGGGG AGA CCCGGA TTTTTGTGGTTCCGA Acid345_4416 5244439 - 5245011 + | G/U mismatch-specific uracil-DNA glycosylase Acid345_4417 5245112 - 5245474 + | hypothetical protein TERM 4013 5245491 - 5245474 - f 76 -12.7 -2.76453 | opp_overlap 5245474 5245475 5245476 TCACAAGGTGAATTA GGGTGGG AATT CCCACCC TTCCTACGGGAAGAG TERM 4014 5245474 - 5245491 + F 81 -12.7 -3.14132 | opp_overlap 5245474, overlap 5245475 5245476 TCACAAGGTGAATTA GGGTGGG AATT CCCACCC TTCCTACGGGAAGAG Acid345_4418 5245548 - 5246330 + | hypothetical protein Acid345_4419 5246421 - 5247170 + | hypothetical protein Acid345_4420 5247186 - 5247842 + | abortive infection protein TERM 4015 5247917 - 5247902 - g 72 -9 -3.86015 | opp_overlap 5247904, overlap 5247889 TACGCCGCCTACAAA GAGACG GACT CGTCTC TCTCCGATTCGGACA Acid345_4421 5247839 - 5248387 + | hypothetical protein Acid345_4422 5248433 - 5248972 + | hypothetical protein TERM 4016 5249228 - 5249258 + T 87 -8.3 -4.67904 | overlap 5249224 5249250 GTTACACCCTCGCCA GTTTGGCTTGTTC CTGCA GATCGAGCCAGAC TTTTTCGACTTGCTC Acid345_4423 5249837 - 5249214 - | dephospho-CoA kinase TERM 4017 5249313 - 5249327 + g 81 -3.4 -5.30348 | GTTATCGATTACGTA GTCGGC GCG GCGGGC TTTTTCTTCTTCGCT TERM 4018 5249872 - 5249889 + r 70 -6.9 -4.21827 | opp_overlap 5249862, overlap 5249870 TTAAACCGTGTTTCC GCGGCGA AGTT TCGCGGC TTTTACGGTGTTTGC Acid345_4424 5250780 - 5249857 - | methenyltetrahydrofolate cyclohydrolase Acid345_4425 5251307 - 5250870 - | hypothetical protein TERM 4019 5250924 - 5250905 - G 83 -12.2 -3.90112 | opp_overlap 5250904 5250901, overlap 5250922 TCGTGTTCAAGCAAA TCGTGTCG GCGA CGACACGA ATCGTATTGCCATCA Acid345_4426 5251558 - 5251298 - | hypothetical protein TERM 4020 5251497 - 5251485 - G 75 -10.5 -3.76226 | AAGCGGAGAACATAA CCGGC GTA GCCGG AGCGCTCGTGGCGAG TERM 4021 5251522 - 5251541 + g 73 -12.1 -3.10796 | GGCGAGTGTTCCAAT CGCGCGC GATCTG GCGCGCG TATTCGATGGTGAGC Acid345_4427 5251729 - 5252109 + | glyoxalase/bleomycin resistance protein/dioxygenase Acid345_4428 5252128 - 5252586 + | hypothetical protein TERM 4022 5252632 - 5252649 + F 70 -9.9 -3.32963 | TCCTTCGACTGCGAA TCCGGAA CGGG TTCCGGA TTCTCCGCTCAGGAT Acid345_4429 5252719 - 5253297 + | TetR family transcriptional regulator TERM 4023 5253321 - 5253340 + G 78 -6.4 -4.58395 | TGCTGGCCGCGGTGG CAGCGTCG GGCG CGATGTTG TTTTTCGCCAGTGGC Acid345_4430 5253281 - 5254693 + | apolipoprotein N-acyltransferase TERM 4024 5254743 - 5254778 + T 83 -14.3 -2.71791 | gap 1, opp_overlap 5254745 5254750, overlap 5254750 CGCTCAGCATGACAG GACAAAAGGCTTCCGT GGTGA ACGGAAGCCTTTT-TC ATTTACGGCGCGGCT TERM 4025 5254777 - 5254745 - T 78 -13.6 -2.67515 | opp_overlap 5254743 5254750, overlap 5254750 CTCAGCATGACAGGA CAAAAGGCTTCCGT GGTGA ACGGAAGCCTTTTT CATTTACGGCGCGGC TERM 4026 5254750 - 5254772 + T 100 -13.5 -4.98531 | opp_overlap 5254750 5254745, overlap 5254743 CATGACAGGACAAAA GGCTTCCGT GGTGA ACGGAAGCC TTTTTCATTTACGGC TERM 4027 5254772 - 5254750 - T 100 -13.5 -4.52047 | opp_overlap 5254743 5254750, overlap 5254745 CATGACAGGACAAAA GGCTTCCGT GGTGA ACGGAAGCC TTTTTCATTTACGGC Acid345_4431 5255643 - 5254792 - | PEGA domain-containing protein TERM 4028 5255020 - 5255044 + g 88 -13.5 -3.70742 | overlap 5255010 CTGTGTCGCGGGCGC GCCTGCGGTCG TAT CGGCCGGAGGC TTCTCTTCAAATTTT TERM 4029 5256008 - 5255973 - H 100 -9 -5.0916 | opp_overlap 5255978, overlap 5255978 GTTTGAACACAAAAA GGAAAGGGCTCCTTGT TTTC ACAAGGAGCCCTTATT TATGTCGGCGACGAC TERM 4030 5256003 - 5255978 - H 100 -17.7 -4.41882 | opp_overlap 5255978, overlap 5255973 AACACAAAAAGGAAA GGGCTCCTTGT TTTC ACAAGGAGCCC TTATTTATGTCGGCG TERM 4031 5255978 - 5256003 + H 100 -17.7 -4.14627 | opp_overlap 5255978 5255973 AACACAAAAAGGAAA GGGCTCCTTGT TTTC ACAAGGAGCCC TTATTTATGTCGGCG TERM 4032 5257659 - 5257670 + H 74 -2.2 -5.06414 | ACGGTTCCCCAATAT TCTC CTTA GAGG TTTTTCTTGGCAGCG TERM 4033 5258488 - 5258499 + H 84 -5.8 -5.00616 | TCACCCCTACCCTCA GCTC ATCC GAGC TTTTTTCAACAAACA TERM 4034 5258767 - 5258779 + H 84 -9.1 -4.2354 | AGGTACTATTTCACT CCCCT AAC AGGGG TTCTTTTCACCTTTC TERM 4035 5259366 - 5259322 - H 70 -5 -4.4648 | gap 1, opp_overlap 5259323, overlap 5259323 AGCTTGACCACAAAA TTTACTCAGCACACCCGCGTC TCAC GACCCGGATCTGC-GAGCAAT TTTCATGTCGCCAAC TERM 4036 5261579 - 5261609 + H 78 -11.9 -3.25942 | gap 1, opp_overlap 5261571 TTTGAAACCTGAACC GCCTCGTCCAGGAC GGAG GTCC-GGACGAGAC TTGCTCTCGCGCGCT Acid345_4432 5262724 - 5264784 + | metal dependent phosphohydrolase Acid345_4433 5264948 - 5266114 + | hypothetical protein Acid345_4434 5266208 - 5266447 + | prevent-host-death protein Acid345_4435 5266428 - 5266895 + | hypothetical protein Acid345_4436 5267888 - 5266920 - | hypothetical protein Acid345_4437 5269364 - 5268297 - | sodium/calcium antiporter TERM 4037 5268620 - 5268648 + g 78 -8.7 -4.23723 | opp_overlap 5268617 CGCCGGCAATCAGGA TGCCGACGACGCT CTT AGGGGCGCCGGCA TTTTCAATCATCTTC TERM 4038 5269279 - 5269247 - G 79 -5.6 -4.74132 | gap 1, overlap 5269252 ACACCGCAGCAAAAA CAACCG-CGAAGATC GCAA GACCTTCGACCGTCG CCAACCACACGTTGC Acid345_4438 5271860 - 5269437 - | hypothetical protein TERM 4039 5272032 - 5272058 + G 76 -2.9 -5.02476 | gap 1, overlap 5272034 AATTTCATTCTCATC GCGGGAC-TCGC GATT GCGGGGTTCCAC TTTTTTGCCGAATAT Acid345_4439 5271984 - 5272352 + | hypothetical protein Acid345_4440 5272382 - 5272606 + | hypothetical protein TERM 4040 5272635 - 5272611 - T 95 -11.4 -4.56978 | opp_overlap 5272610 TCCGCAAATAAGAAA GCCGCCCGGA GCGAG TCCGAACGGC CTCATTCAATTCAAC Acid345_4441 5273600 - 5272656 - | hypothetical protein TERM 4041 5275112 - 5275084 - g 75 -12.4 -3.24747 | opp_overlap 5275080 5275084 GGTGGATACCACCAA CCAGCCGACGGT CTCGC AACGTCGGCCGG TAAGTTTCGTGAGCT Acid345_4442 5273801 - 5275849 + | glycyl aminopeptidase Acid345_4443 5276256 - 5275852 - | hemerythrin-like, metal-binding Acid345_4444 5276618 - 5276367 - | hypothetical protein TERM 4042 5276711 - 5276736 + r 74 -7.5 -4.07687 | opp_overlap 5276733, overlap 5276730 5276732 5276733 GAGAGGGATTCGAAC CCCCGTTACGG TTTC CCGTAAAGCGG TTTTCAAGACCGCCT TERM 4043 5276909 - 5276855 - R 86 -15 -2.94333 | gap 1, overlap 5276852 CCTCAAAAGGAAGGA TGCGCTCCTAAGCTGCCGGGCGC GCGGTGAATT GCGGCCGGCAGCG-AGGAGCGCT TGGGAGTTAGATGGC Acid345_4445 5277254 - 5276916 - | nitrogen regulatory protein P-II, GlnB, GlnK Acid345_4446 5278935 - 5277310 - | ammonium transporter TERM 4044 5277549 - 5277533 - G 75 -10.1 -3.6869 | overlap 5277537 TACATCAACGCCAAA GCCACGC CAA ACGTGGC GAAAGTGATGATCGC Acid345_4447 5280687 - 5279323 - | hypothetical protein TERM 4045 5280473 - 5280498 + g 78 -6.1 -4.59853 | gap 1, opp_overlap 5280456 5280453, overlap 5280471 GACGACGCCCCTGAC GCGGCTGGCG CGGTCTC TGCC-GCCGC TTTTTCACCGGTTAG TERM 4046 5281009 - 5281047 + H 73 -5.9 -4.50627 | overlap 5281013 5281014 5281017 TCTGAGCCGTCAAGC CGAGCTGCGTGCATCGG TGAAT CCGATGCACTGGATTCG TTTCTTTCATGAGTC TERM 4047 5281017 - 5281039 + H 78 -13.5 -2.66552 | overlap 5281013 5281014 5281009 GTCAAGCCGAGCTGC GTGCATCGG TGAAT CCGATGCAC TGGATTCGTTTCTTT TERM 4048 5281468 - 5281441 - g 81 -9.1 -4.36914 | GCGCGGCCTACAAAA TCGCGGGCGAT GACGCG ACCGCGCGCGA GTTGGCCGACTCGCT Acid345_4448 5281056 - 5282039 + | ECF subfamily RNA polymerase sigma-24 factor TERM 4049 5282180 - 5282212 + G 70 -12.1 -2.80244 | gap 1, opp_overlap 5282175 5282179, overlap 5282179 5282177 5282182 CGCCAGGTAACGGAG CATCTCGCGGC-CT GCAGGG AGTGCCGCGAGGTG GTGTTTCTTGCGACG Acid345_4449 5282045 - 5283271 + | hypothetical protein Acid345_4450 5283631 - 5283272 - | XRE family transcriptional regulator Acid345_4451 5283995 - 5283612 - | hypothetical protein Acid345_4452 5285085 - 5284051 - | hypothetical protein Acid345_4453 5286371 - 5285124 - | RNA polymerase ECF-subfamily sigma factor Acid345_4454 5286447 - 5286815 + | DGPFAETKE domain-containing protein Acid345_4455 5286886 - 5287395 + | hypothetical protein Acid345_4456 5287429 - 5287842 + | glyoxalase/bleomycin resistance protein/dioxygenase Acid345_4457 5289640 - 5287844 - | periplasmic sensor signal transduction histidine kinase Acid345_4458 5291511 - 5289790 - | serine/threonine protein kinase TERM 4050 5291094 - 5291106 + g 70 -2.6 -4.81551 | overlap 5291092 CGGGTTTGATGTCGC GGTG AACAA CGCC TTTTTCGTGTGCGTA TERM 4051 5291786 - 5291745 - R 78 -12.2 -3.29461 | opp_overlap 5291747, overlap 5291746 CAAGCGCCGTGATAA GCCGGCGGACCGCCCT GTGTCGCGGG AGGGCGGCCCGCCGTT TTTCTCCTGGAGGGA TERM 4052 5291785 - 5291746 - R 85 -15.7 -2.57463 | opp_overlap 5291747, overlap 5291745 AAGCGCCGTGATAAG CCGGCGGACCGCCCT GTGTCGCGGG AGGGCGGCCCGCCGT TTTTCTCCTGGAGGG TERM 4053 5291747 - 5291784 + r 100 -17 -4.91109 | opp_overlap 5291746 5291745 AGCGCCGTGATAAGC CGGCGGACCGCCCT GTGTCGCGGG AGGGCGGCCCGCCG TTTTTCTCCTGGAGG Acid345_4459 5292294 - 5291815 - | protein of unknown function, Spy-related Acid345_4460 5292506 - 5293198 + | two component transcriptional regulator Acid345_4461 5293240 - 5294598 + | histidine kinase Acid345_4462 5294687 - 5295145 + | hypothetical protein TERM 4054 5295163 - 5295195 + T 83 -12 -3.72576 | opp_overlap 5295169, overlap 5295169 TCGACAGAGGTGCAT GAAAAAGCCCACGC TCGTC GCGTGGGCTTCGTC TTTGCTCCAGCACCG TERM 4055 5295189 - 5295169 - T 100 -14 -4.72986 | opp_overlap 5295163 5295169 GAGGTGCATGAAAAA GCCCACGC TCGTC GCGTGGGC TTCGTCTTTGCTCCA TERM 4056 5295169 - 5295189 + T 95 -14 -3.48269 | opp_overlap 5295169, overlap 5295163 GAGGTGCATGAAAAA GCCCACGC TCGTC GCGTGGGC TTCGTCTTTGCTCCA Acid345_4463 5297500 - 5295212 - | putative proline-rich transmembrane protein TERM 4057 5295792 - 5295806 + g 84 -12.8 -3.6849 | GCGTTCGCCGGACCC GCCGGG GTT CCCGGC TTGTTGACGTTGGCT TERM 4058 5296201 - 5296237 + g 78 -11.5 -3.64371 | CCTTGGTCGGCGCCA CGGATGGCCCAGCCGAG AAC CTCGCCTGTTCCATCTG TTTCGGATCTACCTT Acid345_4464 5298151 - 5297717 - | hypothetical protein Acid345_4465 5298496 - 5298170 - | hypothetical protein TERM 4059 5298527 - 5298539 + G 74 -7.7 -4.23213 | overlap 5298520 GACTGAGCGTGGCGT TGAGC GCG GCTCA TTTATTCGATATGAA Acid345_4466 5298520 - 5298912 + | hypothetical protein Acid345_4467 5300776 - 5298935 - | hypothetical protein TERM 4060 5301107 - 5301090 - H 80 -9.1 -4.08216 | overlap 5301101 CCAGTTCTTTGAAAA CCCGGCA AACA TGCCAGG CGGTCAGCCCGCACA Acid345_4468 5301446 - 5303317 + | peptidyl-dipeptidase A TERM 4061 5303336 - 5303363 + F 100 -18.6 -4.83722 | opp_overlap 5303350 TTGAACTTCCTGACA CCCTACTGACAG AACC CTGTCAGTAGGG TTTTCTTATGCTCTT Acid345_4469 5303540 - 5304010 + | hypothetical protein TERM 4062 5304186 - 5304174 - g 70 -4.8 -4.42386 | CCGTTACTGACAAAA TCGG CCTGT CCGA CTTCGCACGCACGTT Acid345_4470 5304131 - 5305702 + | bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase Acid345_4471 5306643 - 5305801 - | HemK family modification methylase Acid345_4472 5307781 - 5306702 - | peptide chain release factor 1 TERM 4063 5306985 - 5307004 + g 75 -4.2 -4.77036 | ACGCGCATTCCCTTT TCGCGGTT CTTG ATCTGCGA TTTTTCGTCCTGGCA Acid345_4473 5308992 - 5308009 - | hypothetical protein TERM 4064 5308382 - 5308403 + g 76 -7.3 -4.46212 | overlap 5308383 TTGGTAAGCGGATCG TGGTTTTCG AAGG CGAAGACCG TTTTGTGCTCGGCGC Acid345_4474 5309177 - 5309623 + | hypothetical protein Acid345_4475 5309657 - 5311387 + | DNA ligase I, ATP-dependent (dnl1) Acid345_4476 5312331 - 5311393 - | cation diffusion facilitator family transporter TERM 4065 5313182 - 5313163 - g 73 -2.8 -4.85599 | overlap 5313165 CTGACGTTACAAAAA CAGATCGA AACC TCGATCAA AAACGAACCTTCGTT TERM 4066 5313180 - 5313165 - g 71 -7.6 -4.05067 | overlap 5313163 GACGTTACAAAAACA GATCGA AACC TCGATC AAAAACGAACCTTCG Acid345_4477 5312521 - 5313513 + | putative phophoslipid binding protein TERM 4067 5313549 - 5313532 - f 83 -14.1 -2.78596 | opp_overlap 5313532 GATCGTTTTACGAGA GGCGCGC TTAG GCGCGCC TTTTCTTATGGGTTC TERM 4068 5313532 - 5313549 + F 100 -14.1 -4.80959 | opp_overlap 5313532 GATCGTTTTACGAGA GGCGCGC TTAG GCGCGCC TTTTCTTATGGGTTC TERM 4069 5313552 - 5313572 + F 82 -11.3 -3.76952 | GCTTAGGCGCGCCTT TTCTTATGG GTT CCATAAGAA TTTGCCTTGCGTCCA TERM 4070 5313662 - 5313690 + G 82 -8.7 -4.44667 | opp_overlap 5313641 5313639 5313636, overlap 5313664 CACGCTGCTGATGGC AATCGGCGTCGGC GTG GCCGTCGCCAATA TTTATTATTGCCAGC TERM 4071 5313664 - 5313688 + G 81 -11.3 -3.82963 | opp_overlap 5313641 5313639 5313636, overlap 5313662 CGCTGCTGATGGCAA TCGGCGTCGGC GTG GCCGTCGCCAA TATTTATTATTGCCA TERM 4072 5313893 - 5313905 + G 81 -9.1 -4.28254 | CGCACTGCTCACAGC GCTCG CGC CGAGC TTTTCCCTGTTGGCA TERM 4073 5314082 - 5314107 + G 93 -5.3 -5.58454 | overlap 5314084 TGTTGCTGGATTCGT CGGCGCGGCAT TCGG ATGGCGCGCTA TTTTTTTCATCTCCG TERM 4074 5314084 - 5314105 + G 88 -10.1 -4.42962 | overlap 5314082 TTGCTGGATTCGTCG GCGCGGCAT TCGG ATGGCGCGC TATTTTTTTCATCTC Acid345_4478 5313597 - 5314820 + | major facilitator transporter Acid345_4479 5317610 - 5314821 - | DNA polymerase I Acid345_4480 5319207 - 5317651 - | glycosyl transferase family protein TERM 4075 5318350 - 5318338 - G 72 -5.5 -4.41309 | AAAGAAGAAGAGAAA GGTCA GGC CGACC ACGCGATACTTTTTC Acid345_4481 5320326 - 5319226 - | queuosine biosynthesis protein TERM 4076 5319276 - 5319262 - G 78 -4.2 -4.91109 | GCCGTATGAGAAAAA GCGG TACCGCT CCGC CACTGCATGGTTATA Acid345_4482 5320515 - 5321177 + | class II aldolase/adducin-like TERM 4077 5321195 - 5321216 + T 100 -15.9 -5.10933 | opp_overlap 5321197 TTCTGTGAAGGACGA GAGGCACGG TGCG CCGTGCCTC TTTTCTTTTGCGTAC TERM 4078 5321214 - 5321197 - T 79 -12.7 -2.86164 | opp_overlap 5321195 CTGTGAAGGACGAGA GGCACGG TGCG CCGTGCC TCTTTTCTTTTGCGT Acid345_4483 5323448 - 5321235 - | TonB-dependent receptor TERM 4079 5324079 - 5324068 - g 70 -3.6 -4.58395 | opp_overlap 5324070, overlap 5324069 5324070 TCCACTGGGTAAAAA GCCC TGAA GAGC GGCCTCAGGATTTCT Acid345_4484 5323842 - 5326991 + | glycoside hydrolase family protein Acid345_4485 5327514 - 5327077 - | NIPSNAP domain-containing protein Acid345_4486 5328517 - 5327603 - | DMT family permease Acid345_4487 5329495 - 5328581 - | lipoyl synthase Acid345_4488 5330021 - 5329539 - | ankyrin repeat-containing protein Acid345_4489 5330722 - 5330135 - | TPR repeat-containing protein TERM 4080 5330639 - 5330657 + g 76 -4.5 -4.84918 | AGCAACCATCGCCTT GTCGTAG TTTTT CTTCGAC TTTTCTGTTTGTGCG Acid345_4490 5332356 - 5330764 - | alternative thymidylate synthase-like Acid345_4491 5332442 - 5333215 + | hypothetical protein TERM 4081 5333267 - 5333250 - T 70 -9.9 -3.32963 | overlap 5333262 ATGGTGAGCGGAGAA TCCGGAT ACCA ATCCGGA TTCGGAGTCGAAACA Acid345_4492 5334028 - 5333645 - | cytochrome c, class I TERM 4082 5333764 - 5333788 + g 78 -3.6 -5.00616 | gap 1, overlap 5333764 CCCGCTCCTCACTCG CC-TTCATTCC GCTG GGAAGGAACGG TTTTTTAAAGACGCC TERM 4083 5333994 - 5333965 - G 76 -12.9 -3.13382 | overlap 5333957 5333983 5333986 CAGCAAAGGCGAACA TCAGCGCCATCGT AAGA ACGACGACGCCGA ATAAAAATTTCTCGC Acid345_4493 5334073 - 5334495 + | hypothetical protein Acid345_4494 5334476 - 5334937 + | hypothetical protein Acid345_4495 5336494 - 5334938 - | D-alanyl-D-alanine carboxypeptidase TERM 4084 5335539 - 5335507 - G 77 -11.9 -3.55761 | GAGGCAGGCGTGAAA CCGGAGCGGGCGC GCGATCG GCGCCGCCTCCGG CTGAGGCCGTCGCGG TERM 4085 5335733 - 5335759 + g 71 -13 -2.57294 | opp_overlap 5335733, overlap 5335732 5335750 AATGTTCCCCCACAA CGTGAGCTGGTT CGA ACCCGGCTCACG GTTGATGTAGATCTT Acid345_4496 5336624 - 5337532 + | dihydropteroate synthase TERM 4086 5338884 - 5338910 + G 88 -14.4 -3.54424 | ATCGTCGGAAAGTTT GATCGTCCGTGG TTT CCGCGGCCGATC TTTGGGACGATCCGC Acid345_4497 5337702 - 5339042 + | deoxyribodipyrimidine photo-lyase type II TERM 4087 5339077 - 5339093 + T 84 -13.7 -3.06183 | GGGTCCTTCGACTGC GCAGCGC TTC GCGCTGC TTCGCTAAGGATGAC TERM 4088 5339256 - 5339222 - T 75 -11.4 -3.34895 | overlap 5339223 5339249 CTCACGCTGAACGAA CTTCCCCACCCTACGC TGC GCGTAGAATGGGGCAC CCAAGTCAAAAACTA TERM 4089 5339255 - 5339223 - T 83 -14.9 -2.60723 | overlap 5339222 5339249 TCACGCTGAACGAAC TTCCCCACCCTACGC TGC GCGTAGAATGGGGCA CCCAAGTCAAAAACT Acid345_4498 5340408 - 5339269 - | homoserine O-acetyltransferase Acid345_4499 5341748 - 5340405 - | O-acetylhomoserine/O-acetylserine sulfhydrylase TERM 4090 5341802 - 5341824 + r 89 -13.4 -3.57561 | opp_overlap 5341802 CTGCAAAAGCAAAAA CCCACGATCC GGG GGACCGTGGG TTTAGGAACTTAGAC TERM 4091 5341824 - 5341802 - R 100 -15.6 -5.0925 | opp_overlap 5341802 CTGCAAAAGCAAAAA CCCACGATCC GGG GGACCGTGGG TTTAGGAACTTAGAC TERM 4092 5342063 - 5342022 - R 100 -14.3 -4.26903 | opp_overlap 5342021 5342020, overlap 5342023 TTTACTCGATGAAAA CGGGAATCCCCACCCTCCC TGTG GGAAGGGTGGGGCACCCAG AGTTATTTGGTTCCG TERM 4093 5342061 - 5342023 - R 91 -15.3 -3.1582 | gap 1, opp_overlap 5342021 5342020, overlap 5342022 TTACTCGATGAAAAC GGGAATCCCCACCCTCCC TGTG GGAAGGGTGGGG-CACCC AGAGTTATTTGGTTC Acid345_4500 5343355 - 5342066 - | amidohydrolase Acid345_4501 5344681 - 5343356 - | amidohydrolase TERM 4094 5343514 - 5343497 - G 74 -11.3 -3.49618 | opp_overlap 5343499 5343510 GTTCCAGAGAACCAA GTCGGCA TCTT TGCCGAC GTCGATGGAGCCGGT TERM 4095 5344477 - 5344490 + g 91 -8.1 -5.09895 | opp_overlap 5344420 5344476 5344474 CATCGGTACCAACAG CGGCA ATCT TGCCG TTTTTTACGTAAATG Acid345_4502 5344794 - 5345234 + | D-tyrosyl-tRNA deacylase Acid345_4503 5345235 - 5346173 + | hypothetical protein Acid345_4504 5346189 - 5346785 + | methyltransferase type 12 Acid345_4505 5347178 - 5347423 + | acyl carrier protein Acid345_4506 5347426 - 5348673 + | 3-oxoacyl-[acyl-carrier-protein] synthase II TERM 4096 5348687 - 5348721 + T 86 -12.2 -3.84514 | opp_overlap 5348694 5348695, overlap 5348694 5348695 AACAAACCGACAATA GAGAAAAGGCCCAGCT GAT AGCTGGGCACTTTTTC TTTGATGATTCCAAT TERM 4097 5348694 - 5348715 + T 100 -10.9 -5.34309 | gap 1, opp_overlap 5348694 5348695, overlap 5348687 5348695 CGACAATAGAGAAAA G-GCCCAGCT GAT AGCTGGGCAC TTTTTCTTTGATGAT TERM 4098 5348714 - 5348694 - T 100 -11.1 -4.71223 | opp_overlap 5348694 5348687 5348695, overlap 5348695 CGACAATAGAGAAAA GGCCCAGCT GAT AGCTGGGCA CTTTTTCTTTGATGA TERM 4099 5348695 - 5348713 + T 86 -14.6 -2.86291 | opp_overlap 5348694 5348695, overlap 5348694 5348687 GACAATAGAGAAAAG GCCCAGCT GAT AGCTGGGC ACTTTTTCTTTGATG TERM 4100 5348713 - 5348695 - T 95 -14.6 -3.41649 | opp_overlap 5348695 5348694 5348687, overlap 5348694 GACAATAGAGAAAAG GCCCAGCT GAT AGCTGGGC ACTTTTTCTTTGATG Acid345_4507 5349524 - 5348736 - | glyoxalase/bleomycin resistance protein/dioxygenase Acid345_4508 5350606 - 5349581 - | aldo/keto reductase Acid345_4509 5351091 - 5350654 - | hypothetical protein TERM 4101 5351178 - 5351219 + H 81 -14.5 -2.53263 | opp_overlap 5351170 5351160 5351159 5351175, overlap 5351175 5351170 ATGTAAAGGATACTT GACACGCGTTGATGTCAAG TGTA CTTTACATCAACGCGAGGC TAACTTGGAACTACC TERM 4102 5351317 - 5351329 + G 71 -6.9 -4.25104 | CTGTATTGCGTGCTG CTGCC GGT GGCGG TTTTGCTGACGAAGC Acid345_4510 5351224 - 5351631 + | hypothetical protein Acid345_4511 5351628 - 5351822 + | XRE family transcriptional regulator Acid345_4512 5351836 - 5352753 + | ABC transporter, ATPase subunit TERM 4103 5352819 - 5352802 - g 70 -4.2 -4.56775 | ACGTGTGCGCAAAAA GTCATT CTTAGT AATGAC CGTTCTTGTGCCCGC Acid345_4513 5352746 - 5354044 + | hypothetical protein TERM 4104 5354060 - 5354087 + F 100 -14.9 -4.72986 | GTACTTCTTCTCCCC GCCCCATCCTG CTCCTC CAGGGTGGGGC TTTTTGCTGCCGCTA Acid345_4514 5354113 - 5354853 + | hypothetical protein TERM 4105 5354881 - 5354851 - T 79 -11.3 -3.62224 | opp_overlap 5354858, overlap 5354858 ACAGTTTCCGAAGAA TAAAAAAGCCCAG ACGAG CCGGGCTTTTTCA TTCAAACAACAACTT TERM 4106 5354858 - 5354874 + T 80 -5 -4.8622 | opp_overlap 5354851 5354858 CCGAAGAATAAAAAA GCCCAG ACGAG CCGGGC TTTTTCATTCAAACA TERM 4107 5354874 - 5354858 - T 100 -7.2 -5.64873 | opp_overlap 5354858, overlap 5354851 CCGAAGAATAAAAAA GCCCAG ACGAG CCGGGC TTTTTCATTCAAACA Acid345_4515 5356957 - 5354900 - | PgPepO oligopeptidase TERM 4108 5356561 - 5356589 + g 74 -7.3 -4.2828 | opp_overlap 5356566, overlap 5356563 CGAGTGTCGACTTCA GAGGATCGAGGCC TTT GGCGTCGATGCCC TTTTCGTCCATGCAA TERM 4109 5357027 - 5357011 - R 80 -9.4 -4.14627 | overlap 5357012 GCCTGACACAAAGAA GCCCTG TCCTG CAGGGC AGGGTCCAGGGCTCG Acid345_4516 5359194 - 5357140 - | PgPepO oligopeptidase TERM 4110 5359323 - 5359302 - R 100 -14.4 -5.32882 | opp_overlap 5359299 TAGTAGCATAAAAAA GCGGGCCG TGGTGG CGGCCCGC CTGTAAGTTCCTGTA Acid345_4517 5360438 - 5359359 - | hypothetical protein Acid345_4518 5360926 - 5360549 - | phosphopantethiene-protein transferase domain-contain protein Acid345_4519 5361081 - 5361281 + | cold-shock DNA-binding protein family protein TERM 4111 5361301 - 5361332 + T 85 -13 -3.59979 | opp_overlap 5361301 5361303 5361304, overlap 5361303 5361304 5361307 TCGTCTGAAATCCAA GATCGAGGGCAGCC GCGA GGCTGCCCTTGGTG TTTCCGGTCAGAAGA TERM 4112 5361330 - 5361303 - T 74 -11.2 -3.20349 | opp_overlap 5361301 5361303 5361304 5361307, overlap 5361301 5361304 GTCTGAAATCCAAGA TCGAGGGCAGCC GCGA GGCTGCCCTTGG TGTTTCCGGTCAGAA TERM 4113 5361303 - 5361330 + T 100 -15.6 -3.38046 | opp_overlap 5361303 5361301 5361304, overlap 5361301 5361304 5361307 GTCTGAAATCCAAGA TCGAGGGCAGCC GCGA GGCTGCCCTTGG TGTTTCCGGTCAGAA TERM 4114 5361304 - 5361329 + T 89 -16.9 -2.62613 | opp_overlap 5361304 5361303 5361301, overlap 5361303 5361301 5361307 TCTGAAATCCAAGAT CGAGGGCAGCC GCGA GGCTGCCCTTG GTGTTTCCGGTCAGA TERM 4115 5361329 - 5361304 - T 83 -14.7 -2.51888 | opp_overlap 5361303 5361301 5361304 5361307, overlap 5361303 5361301 TCTGAAATCCAAGAT CGAGGGCAGCC GCGA GGCTGCCCTTG GTGTTTCCGGTCAGA TERM 4116 5361307 - 5361326 + T 95 -15 -3.46285 | opp_overlap 5361304 5361303 5361301, overlap 5361304 5361303 5361301 GAAATCCAAGATCGA GGGCAGCC GCGA GGCTGCCC TTGGTGTTTCCGGTC Acid345_4520 5361870 - 5361340 - | hypothetical protein Acid345_4521 5363285 - 5361867 - | L-seryl-tRNA(Sec) selenium transferase Acid345_4522 5365570 - 5363309 - | ATP-dependent DNA helicase RecG TERM 4117 5366759 - 5366776 + G 90 -7.7 -5.00616 | gap 1 CGTGGACGGCCTCAC CGGCGTGT ACA AC-CGCCG TTTTTTCGAGCGCAA Acid345_4523 5365752 - 5367251 + | diguanylate cyclase with GAF sensor TERM 4118 5367284 - 5367254 - T 100 -13.3 -4.18018 | gap 1, overlap 5367259 GTTGTTCACTTAAAA GGCAACGGCGCAGC CGAA GCCGCGCCGTC-CC ATTCCGAAACCGAAC TERM 4119 5367280 - 5367259 - T 95 -15.1 -3.38281 | overlap 5367254 TCACTTAAAAGGCAA CGGCGCAGC CGAA GCCGCGCCG TCCCATTCCGAAACC Acid345_4524 5368349 - 5367303 - | PDZ/DHR/GLGF Acid345_4525 5369629 - 5368376 - | peptidase S7 Acid345_4526 5370576 - 5369641 - | hypothetical protein TERM 4120 5370281 - 5370258 - G 72 -4.4 -4.67641 | overlap 5370260 AGCCGAAAATGAAAA TCGCCGCTGC CAAT GCGGGGGCAA CACGCATACGATGCA Acid345_4527 5371293 - 5370580 - | ECF subfamily RNA polymerase sigma-24 factor TERM 4121 5371597 - 5371647 + H 77 -11 -3.57239 | overlap 5371598 TTCTAAGCGTACGGT AGGTCGGTGTCCGATTTCGGAGCC GGA GATTTCGATTCCGGACACCGACCA TTATCCTGTTTGGGT TERM 4122 5371598 - 5371646 + H 83 -14.5 -2.7362 | overlap 5371597 TCTAAGCGTACGGTA GGTCGGTGTCCGATTTCGGAGCC GGA GATTTCGATTCCGGACACCGACC ATTATCCTGTTTGGG Acid345_4528 5371739 - 5374168 + | ABC efflux pump, inner membrane subunit Acid345_4529 5374263 - 5375015 + | hypothetical protein TERM 4123 5376190 - 5376174 - gT 79 -7.9 -4.46233 | CGAAGTGGAAAGAAA CCAGGTC CAT GCCCTGG CTGGTCGCCGCGATC Acid345_4530 5374967 - 5377300 + | hypothetical protein Acid345_4531 5378306 - 5377305 - | phytanoyl-CoA dioxygenase Acid345_4532 5378781 - 5378326 - | hypothetical protein TERM 4124 5378828 - 5378800 - R 100 -13.2 -4.66163 | opp_overlap 5378775, overlap 5378803 ATTTGTACCCAAAAA GAGTGGCAGGTC TTTTC GACCTGCCATTC GGGGAAACTGGTTAA TERM 4125 5378825 - 5378803 - R 81 -13.5 -2.96405 | opp_overlap 5378775, overlap 5378800 TGTACCCAAAAAGAG TGGCAGGTC TTTTC GACCTGCCA TTCGGGGAAACTGGT Acid345_4533 5379722 - 5378844 - | peptidylprolyl isomerase, FKBP-type TERM 4126 5379510 - 5379522 + g 86 -6.2 -5.0065 | GACGCTCATACCGAT GGCG TAACT CGCC TTTTCTTTGTCGGTC Acid345_4534 5379843 - 5380703 + | hypothetical protein TERM 4127 5380712 - 5380740 + T 70 -9.5 -3.41527 | opp_overlap 5380713, overlap 5380713 TCGCTAAAGCAAGAA AGGCCAGCTCTCT CAG GGAGAGCTGACCC TTGTCGTCAAGCTTG TERM 4128 5380713 - 5380739 + T 75 -13 -2.64595 | opp_overlap 5380713, overlap 5380712 CGCTAAAGCAAGAAA GGCCAGCTCTCT CAG GGAGAGCTGACC CTTGTCGTCAAGCTT TERM 4129 5380739 - 5380713 - T 100 -14.5 -4.39696 | opp_overlap 5380713 5380712 CGCTAAAGCAAGAAA GGCCAGCTCTC TCAGG GAGAGCTGACC CTTGTCGTCAAGCTT Acid345_4535 5381257 - 5380796 - | 50S ribosomal protein L9P Acid345_4536 5381755 - 5381384 - | SSU ribosomal protein S18P Acid345_4537 5382314 - 5381871 - | SSU ribosomal protein S6P Acid345_4538 5383068 - 5382382 - | peptidyl-tRNA hydrolase TERM 4130 5382934 - 5382991 + g 73 -11.4 -3.39286 | GAACCCCAGGTTATG CGGCGTGA-ACTGATACTGCATGCCCGG ATTG CCGAGCCC-CACTATCAGTTTCACGCCG TCTTTCCCCTGCTGT TERM 4131 5383105 - 5383137 + r 71 -8.6 -3.84406 | gap 1, opp_overlap 5383113, overlap 5383113 GGACCTGCTGTTCGC GGC-CAGAAGAAGAA CTAC TTCTTCTTCTCTGCC TTCTTCTCGTCGCCA Acid345_4539 5383820 - 5383119 - | 50S ribosomal protein L25P Acid345_4540 5384912 - 5383833 - | ribose-phosphate pyrophosphokinase TERM 4132 5384727 - 5384709 - G 73 -11 -3.37612 | opp_overlap 5384705, overlap 5384717 CGGAATTCCAAGGAA CGCGCAAA TTT CTTGCGCG AGCGGTTCATTCGCC Acid345_4541 5386107 - 5385169 - | 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase Acid345_4542 5387419 - 5386154 - | hypothetical protein TERM 4133 5386562 - 5386543 - G 84 -3.6 -5.26316 | TCACTGCACAAAAAA CACGAA TCGCTGCC TTCGTG TCTCGCGAGTTCCAA TERM 4134 5387195 - 5387170 - G 76 -12.5 -3.05463 | ATGTCGCGTACCCAA GCAGCCGCAGG TCCA CCTGCAGCAGC GCCAATCCAAGCACG TERM 4135 5387343 - 5387317 - G 72 -8.6 -3.87869 | opp_overlap 5387339 5387342 GGAAGTCGTGATAAA CGTACGGGTGCA GAG CGCAGCCGAACG CCGCGAAGGCGAGAG Acid345_4543 5387927 - 5387541 - | hypothetical protein ruvB 5389064 - 5387982 - | Holliday junction DNA helicase B Acid345_4545 5389130 - 5389648 + | DinB Acid345_4546 5390595 - 5389651 - | DeoR family transcriptional regulator Acid345_4547 5390700 - 5391218 + | DinB TERM 4136 5391262 - 5391248 - T 76 -5.6 -4.74103 | overlap 5391249 TGTGGAAGGGAAAAA TGTGGG TGC CCCACC CTTCCGGCTTTAGCC Acid345_4548 5392610 - 5391315 - | glutamate-1-semialdehyde 2,1-aminomutase TERM 4137 5392759 - 5392739 - H 80 -9 -4.08216 | gap 1, overlap 5392743 TCACGCCCGCTAAAA GCAAGGGGC TTTA GCCCC-TGC CTCCCCCGCCCGCGC TERM 4138 5392756 - 5392743 - H 74 -9.5 -3.66908 | overlap 5392739 GCCCGCTAAAAGCAA GGGGC TTTA GCCCC TGCCTCCCCCGCCCG TERM 4139 5394586 - 5394568 - g 80 -10.3 -4.0031 | AGCGCGAGTAAAGAA GGCCATG AAAGA CATGGCC GACGAACTCCTCAAG Acid345_4549 5392793 - 5396341 + | transcription-repair coupling factor TERM 4140 5397224 - 5397241 + G 75 -8.4 -4.09864 | opp_overlap 5397183 5397184 5397224, overlap 5397214 ATTCGCATTGAAAAA CCCGGA ACTCGG TCCGGG TTTTGCGAAGTACCT TERM 4141 5397241 - 5397224 - g 86 -8.4 -4.66163 | opp_overlap 5397224 5397214, overlap 5397183 5397184 ATTCGCATTGAAAAA CCCGGA ACTCGG TCCGGG TTTTGCGAAGTACCT Acid345_4550 5396394 - 5397293 + | UDP-glucose pyrophosphorylase Acid345_4551 5397645 - 5397316 - | hypothetical protein TERM 4142 5397895 - 5397946 + G 76 -7.3 -4.49311 | gap 3, opp_overlap 5397890 5397893 CACCAGGAGACCAGG TGGCCCTGAGCGGCGTCTATCGCGTG GTA CACGCGG-AG-CACCGC-CATGACCA TTTTGTGATCGTGCT Acid345_4552 5397768 - 5398097 + | hypothetical protein TERM 4143 5398117 - 5398106 - T 70 -3 -4.8143 | overlap 5398099 CGAATAATCCAAAAA CAAT TTTG ATTG GCTGCCCCACGTCTC TERM 4144 5398119 - 5398155 + T 71 -10.1 -3.54424 | overlap 5398123 AACAATTTTGATTGG CTGCCCCACGTCTCG CGATTTT CGAGACGTGGGTGGG TTTCGACAGGTGGGA TERM 4145 5398123 - 5398151 + T 85 -16.1 -2.64274 | overlap 5398119 ATTTTGATTGGCTGC CCCACGTCTCG CGATTTT CGAGACGTGGG TGGGTTTCGACAGGT Acid345_4553 5398684 - 5398175 - | phosphoribosylaminoimidazole carboxylase, catalytic subunit Acid345_4554 5399928 - 5399023 - | hypothetical protein TERM 4146 5400760 - 5400743 - g 90 -11.3 -4.30576 | GCCGCAGCAGCAAAA CCCTGCT ACGC AGCAGGG ACAGCAAACGGCGAT Acid345_4555 5400219 - 5401328 + | TonB-like protein Acid345_4556 5401385 - 5401921 + | hypothetical protein Acid345_4557 5404767 - 5401987 - | putative Ig TERM 4147 5404569 - 5404553 - G 72 -8.7 -3.80733 | CTCACCGCATAAGAA GTCACCG TGC CGGTAAC ACTCGGCGTCAGTGC Acid345_4558 5405831 - 5404860 - | lysine decarboxylase transcriptional regulator, CadC Acid345_4559 5405871 - 5406794 + | tRNA delta(2)-isopentenylpyrophosphate transferase TERM 4148 5406953 - 5406939 - T 74 -10 -3.73056 | opp_overlap 5406939, overlap 5406933 AAACCAAAAGGACAA CATCGC TCT GCGATG TACCTTGTAAAGCCA TERM 4149 5407232 - 5407184 - T 100 -13.8 -5.50723 | gap 1, opp_overlap 5407185 5407186, overlap 5407185 5407186 TCACCAAAACAAAAA TCGGCCCCGCGGAGCGCTC-CTT TTGG AAGCGATCGCCCGGCGGGGCCAT TGTGGAGATCTCTCG TERM 4150 5407185 - 5407231 + T 84 -12.9 -3.32819 | gap 1, opp_overlap 5407184 5407185 5407186, overlap 5407186 CACCAAAACAAAAAT CGGCCCCGCGGAGCGCTC-CTT TTGG AAGCGATCGCCCGGCGGGGCCA TTGTGGAGATCTCTC TERM 4151 5407231 - 5407185 - T 100 -17.3 -3.88807 | gap 1, opp_overlap 5407185 5407186, overlap 5407184 5407186 CACCAAAACAAAAAT CGGCCCCGCGGAGCGCTC-CTT TTGG AAGCGATCGCCCGGCGGGGCCA TTGTGGAGATCTCTC TERM 4152 5407186 - 5407230 + T 89 -16.4 -2.5937 | gap 1, opp_overlap 5407185 5407184 5407186, overlap 5407185 ACCAAAACAAAAATC GGCCCCGCGGAGCGCTC-CTT TTGG AAGCGATCGCCCGGCGGGGCC ATTGTGGAGATCTCT TERM 4153 5407230 - 5407186 - T 100 -18.6 -2.91657 | gap 1, opp_overlap 5407186 5407185, overlap 5407185 5407184 ACCAAAACAAAAATC GGCCCCGCGGAGCGCTC-CTT TTGG AAGCGATCGCCCGGCGGGGCC ATTGTGGAGATCTCT TERM 4154 5407241 - 5407259 + T 70 -6.7 -4.07618 | overlap 5407237 5407242 GGGCCATTGTGGAGA TCTCTCG GGGTG CGAGAGG TTTCGTTGTTGCGCA Acid345_4560 5407645 - 5407286 - | hypothetical protein Acid345_4561 5409065 - 5407743 - | periplasmic sensor signal transduction histidine kinase Acid345_4562 5409805 - 5409062 - | two component transcriptional regulator Acid345_4563 5409972 - 5410553 + | hypothetical protein Acid345_4564 5410711 - 5412585 + | glycoside hydrolase family protein Acid345_4565 5412597 - 5413166 + | hypothetical protein TERM 4155 5413324 - 5413298 - T 95 -14.4 -3.72621 | opp_overlap 5413295 5413301, overlap 5413294 5413301 CGAAACAGAAATGAA CTAGGGCAGCCA TAG CGGCTGCCCTTG GTGTTTAGCGAGAGA TERM 4156 5413301 - 5413321 + T 95 -14 -3.45571 | opp_overlap 5413298 5413294 5413301, overlap 5413295 AACAGAAATGAACTA GGGCAGCC ATAGC GGCTGCCC TTGGTGTTTAGCGAG TERM 4157 5413321 - 5413301 - T 86 -14.7 -2.93941 | opp_overlap 5413301 5413295, overlap 5413298 5413294 AACAGAAATGAACTA GGGCAGCCA TAG CGGCTGCCC TTGGTGTTTAGCGAG Acid345_4566 5414500 - 5413340 - | S-adenosylmethionine synthetase TERM 4158 5413699 - 5413745 + g 78 -9.2 -4.07568 | CGCCGTAGGTGTCGA CGATGATCTTGCGTCCGGTGAC GCC GGCGTCGGCCGCGGGACCACCG TTTTCGAAGCAGCCG TERM 4159 5414578 - 5414553 - H 76 -3.3 -5.07275 | gap 1 GTACAGACAGAAAAA CCACCC-CAA AATAGCA TCGAGGGTGG CGACTGTCGGGAGAC Acid345_4567 5414790 - 5415482 + | hypothetical protein Acid345_4568 5415718 - 5416242 + | Uracil phosphoribosyltransferase TERM 4160 5417028 - 5417008 - g 79 -6.9 -4.56597 | TGCGCTGGCGAAAAA GGATGCA GTGTTGA TGCATCC GGGGCCGATCATTCG Acid345_4569 5416250 - 5417161 + | aspartate carbamoyltransferase Acid345_4570 5417288 - 5417587 + | XRE family transcriptional regulator Acid345_4571 5417574 - 5418887 + | HipA-like TERM 4161 5419263 - 5419245 - g 74 -13.2 -2.94045 | overlap 5419242 5419259 CTATGCGAATAACGA CCGCATGT ACC ACATGCGG CTATGGGACATCCAC TERM 4162 5420168 - 5420182 + G 70 -4.2 -4.59424 | overlap 5420169 GGCTCAATGTGCCGG TGCTGG TGT TCAGCG TTTTGATTTCGATTT TERM 4163 5420489 - 5420477 - g 70 -4.8 -4.42653 | opp_overlap 5420484 ATGGGACGTACAAAA CGTG GGAGT CACG CGTGGCGTACTTTGA Acid345_4572 5419075 - 5421513 + | ABC efflux pump, inner membrane subunit TERM 4164 5421654 - 5421679 + F 100 -11.1 -5.09259 | opp_overlap 5421642, overlap 5421668 ACACCGGAAACATCG GGCTGGGTCGC TGAC GCGATCTGGCC TTTTCTTTTAGAATG Acid345_4573 5421730 - 5422695 + | [Acyl-carrier-protein] S-malonyltransferase Acid345_4574 5423285 - 5422836 - | hypothetical protein Acid345_4575 5424457 - 5423345 - | ABC multidrug efflux pump, inner membrane subunit TERM 4165 5423586 - 5423566 - G 70 -4.6 -4.41348 | overlap 5423567 CGCTCGGGAAATAAA GCAGCGTG TTGAG CACGCCGA ACATGGCGCGCGGCA Acid345_4576 5425485 - 5424454 - | daunorubicin resistance ABC transporter ATPase subunit Acid345_4577 5426546 - 5425482 - | secretion protein HlyD Acid345_4578 5427259 - 5426543 - | TetR family transcriptional regulator TERM 4166 5426736 - 5426701 - G 74 -11.2 -3.51419 | overlap 5426699 TTACGAAATAGAAGA CCACCAACCCGATCAC ACTG GTGATGGCATTGGTGG GATCGATGGCGCGAA Acid345_4579 5427530 - 5428168 + | GreA/GreB family elongation factor Acid345_4580 5429192 - 5428245 - | LysR family transcriptional regulator TERM 4167 5428917 - 5428899 - G 76 -4.5 -4.72272 | opp_overlap 5428899 CTGTCCCAGCAAAAA GCCAATG ACAAA CTTTGGC TTCTCCTCGGGCCGT Acid345_4581 5429321 - 5430025 + | hypothetical protein TERM 4168 5430054 - 5430075 + F 72 -12.3 -2.70932 | opp_overlap 5430058, overlap 5430039 5430036 5430056 5430058 CCTTTCTATTCTCGA CAGACCGTC ACGA GGCGGTCTG TCGTTGAAAGAGCGA Acid345_4582 5430335 - 5430910 + | TetR family transcriptional regulator Acid345_4583 5430995 - 5431789 + | short-chain dehydrogenase/reductase SDR Acid345_4584 5431790 - 5432791 + | zinc-binding alcohol dehydrogenase Acid345_4585 5433727 - 5433290 - | hypothetical protein Acid345_4586 5435377 - 5433740 - | ABC transporter, ATPase subunit TERM 4169 5434038 - 5434059 + g 75 -3.6 -4.84914 | overlap 5434028 GCCAGCCGCGACTTT TCTCCGCC GGACAG GGCGCGGA TTTTCTTATCTACAT Acid345_4587 5435921 - 5435430 - | hypothetical protein Acid345_4588 5436304 - 5435918 - | hypothetical protein Acid345_4589 5436540 - 5437100 + | YceI Acid345_4590 5437139 - 5438044 + | Pirin-like TERM 4170 5438088 - 5438058 - T 100 -12.7 -4.41047 | opp_overlap 5438063, overlap 5438063 AGGCGTGAAGCAAAA GAAAACTCCGCTC GGAAT GAGCGGAGTTTTT GTTTTTGCGCGAATC TERM 4171 5438083 - 5438063 - T 100 -12.6 -5.18643 | opp_overlap 5438063, overlap 5438058 TGAAGCAAAAGAAAA CTCCGCTC GGAAT GAGCGGAG TTTTTGTTTTTGCGC TERM 4172 5438063 - 5438083 + T 100 -13.3 -5.61881 | opp_overlap 5438058 5438063 TGAAGCAAAAGAAAA CTCCGCTCG GAA TGAGCGGAG TTTTTGTTTTTGCGC Acid345_4591 5438891 - 5438103 - | hypothetical protein TERM 4173 5439013 - 5438962 - R 84 -9.4 -4.30034 | opp_overlap 5438967 5438996 AAAAGTTCACGAAAA GGAAACGGCGAACGCGCGTCCT GGAGGGGA ACTAGGCGCGTCCGCCGTTTGC ATCACCACCCACCGT TERM 4174 5439063 - 5439081 + r 100 -3.1 -6.02919 | CGGCGGGGTTAGCGA TCAGTCC TTGGT GTACTGA TTTTTTTGTTTGTCG Acid345_4592 5440244 - 5439063 - | D-alanine--D-alanine ligase TERM 4175 5440287 - 5440267 - H 73 -5.5 -4.67038 | opp_overlap 5440271 5440277, overlap 5440269 TCCTCAAAATGAAAA GACATTATC GCC GATAATGTT CGCATGAAAGTTATC TERM 4176 5440285 - 5440269 - H 74 -8.1 -3.94465 | opp_overlap 5440271 5440277, overlap 5440267 CTCAAAATGAAAAGA CATTATC GCC GATAATG TTCGCATGAAAGTTA Acid345_4593 5440291 - 5440983 + | aspartate racemase TERM 4177 5441014 - 5441055 + F 76 -10.3 -3.70902 | TTGACTATTGTTCCA CCCCTTGCAATACTGAAGT CGTT GCTTCACTATTGTAAGGAG TTTCGATATGCCAGA Acid345_4594 5441063 - 5441530 + | hypothetical protein Acid345_4595 5441530 - 5441859 + | ArsR family transcriptional regulator Acid345_4596 5442803 - 5441856 - | arginase TERM 4178 5442102 - 5442129 + g 76 -12.7 -3.14878 | overlap 5442117 GACGTGATACCCCAC GGTGTTGCGCC CGGCGA GGCGCAGCGCC TCTTCCATTACCGCG TERM 4179 5442862 - 5442840 - R 91 -14.9 -3.06183 | CCGAGCGCGAGCGAA CGGGCACTC CCCAC GAGTGCCCG ACGGTTAAGAGCTTT Acid345_4597 5444217 - 5442889 - | asparaginyl-tRNA synthetase Acid345_4598 5445130 - 5444297 - | xylose isomerase-like TIM barrel Acid345_4599 5446891 - 5445140 - | gamma-glutamyltransferase 1 TERM 4180 5445918 - 5445906 - G 72 -4.8 -4.59853 | GGAATCTTCGAAAAA TCGG GATCG CCGA GAAATTCCGCACGAT TERM 4181 5448324 - 5448313 - g 79 -5.8 -4.72617 | CGACAAAAGAAGAAA GCTC TACG GAGC ACGGGAATAACGAGC Acid345_4600 5446992 - 5448413 + | peptidase M20 Acid345_4601 5449606 - 5448410 - | TPR repeat-containing protein TERM 4182 5449289 - 5449306 + g 78 -3.3 -5.0538 | CAGGTAGTTGATCAT CTCGCTG TTAT CGCCGAG TTTTTTGGCCTCCAG Acid345_4602 5450861 - 5449731 - | deoxyguanosinetriphosphate triphosphohydrolase TERM 4183 5450913 - 5450882 - R 78 -13.8 -2.52834 | opp_overlap 5450882 5450887 5450888, overlap 5450888 GAGTTTAGCACCAAT CAAAAAGGCACCGC TTTC GCGATGCCCTTCTG TCTTCGTGCAGTTTG TERM 4184 5450907 - 5450888 - R 100 -11.4 -4.90869 | opp_overlap 5450888 5450887 5450882, overlap 5450882 AGCACCAATCAAAAA GGCACCGC TTTC GCGATGCC CTTCTGTCTTCGTGC Acid345_4603 5453101 - 5450933 - | TPR repeat-containing protein TERM 4185 5453257 - 5453230 - R 100 -15.6 -4.93365 | opp_overlap 5453229 CCGGAGAAGCAAAAA GGGCGAAACGGC TTGA ACCGCTTCGCCC ATTGAATTGGACGCT Acid345_4604 5453809 - 5453288 - | hypothetical protein TERM 4186 5453497 - 5453516 + g 86 -2.8 -5.50723 | gap 1, overlap 5453488 5453502 TGTGGCCGTGGTCCA CGTACTTGC GCC GCA-GTCCG TTTTTCTTTTGCTGG Acid345_4605 5454648 - 5453809 - | hypothetical protein Acid345_4606 5455742 - 5454648 - | hypothetical protein Acid345_4607 5457518 - 5455743 - | integral membrane protein TERM 4187 5460564 - 5460550 - g 83 -7.8 -4.63527 | opp_overlap 5460552, overlap 5460551 CCACGACGGCAAAAA CGGCGA CGC TCGCCA GCAGGTCGCGCTCGC TERM 4188 5461825 - 5461811 - g 71 -10 -3.53012 | opp_overlap 5461811 TTCGCGTGGGGTAAA GGCGAA GGT TTCGCC TTATATGACAACGTG TERM 4189 5461811 - 5461825 + G 71 -10 -3.48593 | opp_overlap 5461811 TTCGCGTGGGGTAAA GGCGAA GGT TTCGCC TTATATGACAACGTG Acid345_4608 5457809 - 5462023 + | TPR repeat-containing protein Acid345_4609 5462041 - 5463291 + | glycosyl transferase, group 1 Acid345_4610 5463282 - 5464457 + | putative mannose-1-phosphate guanyltransferase Acid345_4611 5464444 - 5464905 + | anti-sigma-factor antagonist Acid345_4612 5464902 - 5466215 + | hypothetical protein Acid345_4613 5466212 - 5466973 + | hypothetical protein TERM 4190 5467113 - 5467082 - g 75 -9.3 -3.80573 | CCCAGCAGCAGCAAA CCGCCGCGCCCGC CGACGC GCAGACGCAGCCG CAGAACGGCACGCAA Acid345_4614 5466991 - 5467506 + | hypothetical protein TERM 4191 5467624 - 5467600 - g 91 -12.9 -4.09864 | ATGGATCCGGCAAAA GCACGCAGATT GAT AACCTGCGCGC CACGCTCCACGCCAA Acid345_4615 5467533 - 5468240 + | thymidylate kinase TERM 4192 5468264 - 5468281 + F 100 -9.8 -5.38054 | TAGGTTTCCGCGAGA CGGCGC GATAAA GCGCCG TTTTTCTTTGTGCAC TERM 4193 5468781 - 5468767 - g 79 -12.8 -3.20723 | opp_overlap 5468779 TTTTGATGAACTCAA GCGCCG CTT CGGCGC GCCAGGCGAGTTTGC Acid345_4616 5468327 - 5469175 + | protein of unknown function, zinc metallopeptidase putative TERM 4194 5469213 - 5469231 + T 91 -7.3 -5.07652 | overlap 5469214 TTTCGACTTAGGCCA ACGGCGC GCGCA GCGCCGC TTTTGTTTTCGGCAA TERM 4195 5469214 - 5469230 + T 76 -10.8 -3.63868 | overlap 5469213 TTCGACTTAGGCCAA CGGCGC GCGCA GCGCCG CTTTTGTTTTCGGCA Acid345_4617 5469775 - 5469194 - | hypothetical protein TERM 4196 5469558 - 5469570 + g 75 -9.1 -4.05033 | overlap 5469559 AGCGCGTTGAGGACG TCGCC GAT GGCGA TTTGTATGGACTCGG TERM 4197 5470252 - 5470202 - H 100 -20.6 -3.53012 | opp_overlap 5470213, overlap 5470203 5470246 CTCTCCCGGTCGAAA GGCCCCACCCTACGAACCGCTC AAAAGCG GAGCGATTCGTAGAATGGGGCA CCCAGAGTCAGAGGA TERM 4198 5470251 - 5470203 - H 100 -24.1 -2.71712 | opp_overlap 5470213, overlap 5470202 5470246 TCTCCCGGTCGAAAG GCCCCACCCTACGAACCGCTC AAAAGCG GAGCGATTCGTAGAATGGGGC ACCCAGAGTCAGAGG TERM 4199 5470374 - 5470353 - H 91 -12.3 -4.08216 | gap 1, opp_overlap 5470370, overlap 5470334 CGAGGTTGTCGAAAA CGGTCGGGTG GGC CACCCG-CCG ATGGAGTTGGTGCGC TERM 4200 5470621 - 5470639 + H 86 -10.2 -4.08064 | opp_overlap 5470620 5470624, overlap 5470624 CGCTGAGGGAACAAC GAAGCGCC TGC GGCGCGTC TTTTCAGACCCACTT TERM 4201 5470636 - 5470624 - H 74 -10.5 -3.54902 | opp_overlap 5470621 5470624, overlap 5470620 TGAGGGAACAACGAA GCGCC TGC GGCGC GTCTTTTCAGACCCA Acid345_4618 5470932 - 5472461 + | hypothetical protein TERM 4202 5472467 - 5472498 + T 100 -13 -4.67641 | opp_overlap 5472466 5472467 5472464 5472462, overlap 5472469 TCTGAACTAAGAGAC TTCGGAGGCTAGCA ACTT TGCTGGCCTCCGTG TTTTCATTTTCAGGT TERM 4203 5472469 - 5472496 + T 100 -17.8 -3.94465 | opp_overlap 5472466 5472467 5472464 5472462, overlap 5472467 TGAACTAAGAGACTT CGGAGGCTAGCA ACTT TGCTGGCCTCCG TGTTTTCATTTTCAG Acid345_4619 5473235 - 5472519 - | hypothetical protein TERM 4204 5472827 - 5472817 - G 74 -2.4 -4.99638 | AGATCGAGACAAAAA CCTG CTT CCGG AAGCGAATCAAAATA Acid345_4620 5473831 - 5473235 - | hypothetical protein Acid345_4621 5475823 - 5474375 - | amidophosphoribosyltransferase TERM 4205 5474477 - 5474494 + g 89 -6.2 -5.03145 | GCAGTAGCTGGTCTT GTCGCC TTCGCC GGCGGC TTTTTTCAGGCCTTC TERM 4206 5475487 - 5475499 + g 71 -6.9 -4.1822 | TGCCGTTGTGGGCGA GGGCG ATG CGTCC TTTATTGCACTCGAC TERM 4207 5475883 - 5475902 + r 78 -13.6 -2.52602 | overlap 5475882 5475881 TTCGCCTGACCCGTT CCCACCTC TTAC GAGGTGGG CTATTGCATTTCGTC Acid345_4622 5478497 - 5476191 - | phosphoribosylformylglycinamidine synthase II TERM 4208 5476368 - 5476388 + g 71 -7.5 -4.12043 | overlap 5476371 GATGAGCTGTGCCTG GAGGCCGTA TTT TACGGCTAC TTGTTTGATTGCTTC Acid345_4623 5478690 - 5478938 + | transcriptional regulator/antitoxin, MazE Acid345_4624 5478932 - 5479282 + | transcriptional modulator of MazE/toxin, MazF Acid345_4625 5480561 - 5479308 - | hypothetical protein TERM 4209 5480142 - 5480169 + g 83 -12.1 -3.82084 | TTTTGCACTCGGCAC CCCGATGCTCA CCATGC TGAGCATTGGG TTCTTAATGTTCGCG Acid345_4626 5480949 - 5481293 + | PadR family transcriptional regulator Acid345_4627 5481290 - 5484037 + | ABC efflux pump, inner membrane subunit Acid345_4628 5484374 - 5486260 + | selenocysteine-specific translation elongation factor SelB TERM 4210 5487378 - 5487397 + G 75 -10.6 -3.67296 | opp_overlap 5487371 GACACGAACCGGTAG CGCCGCCG CGGG CGACGGCG TTTGGATCGCTGGTG Acid345_4629 5486264 - 5487598 + | tRNA (uracil-5-)-methyltransferase Gid Acid345_4630 5487716 - 5488975 + | ABC efflux pump, inner membrane subunit Acid345_4631 5488978 - 5490237 + | ABC efflux pump, inner membrane subunit TERM 4211 5490300 - 5490314 + F 71 -10 -3.54424 | opp_overlap 5490298 ATCCCGCGAGGAACC GCACTG TGC CAGTGC TTTCGGCGACTGAAG Acid345_4632 5490305 - 5491405 + | hypothetical protein Acid345_4633 5493013 - 5491478 - | small GTP-binding protein TERM 4212 5492429 - 5492447 + g 100 -9.5 -4.91109 | CTTGGCGTTCCTCAG CGCGGGT CGGGC GCCCGCG TTTTTGTCCTCCACA TERM 4213 5494482 - 5494496 + G 72 -9.2 -3.64703 | overlap 5494480 ACCTCGGCGACGATC GCCGTC GGC GGCGGC TTTCAATACGCCCGC Acid345_4634 5493171 - 5495195 + | helicase c2 Acid345_4635 5495230 - 5495727 + | hypothetical protein Acid345_4636 5496291 - 5495791 - | GCN5-related N-acetyltransferase Acid345_4637 5496399 - 5497319 + | LysR family transcriptional regulator Acid345_4638 5497414 - 5498499 + | cytochrome c, class I Acid345_4639 5498499 - 5500109 + | hypothetical protein Acid345_4640 5500458 - 5500099 - | hypothetical protein Acid345_4641 5500585 - 5501400 + | hypothetical protein Acid345_4642 5501522 - 5501899 + | putative 6-pyruvoyl tetrahydropterin synthase Acid345_4643 5501915 - 5502595 + | radical SAM family Fe-S protein TERM 4214 5502977 - 5502990 + G 83 -8.1 -4.57341 | TCCAGACACGGCTGG CGGTG GAAA CACCG TTTTTCCGGGCGATT Acid345_4644 5502709 - 5503482 + | ExsB TERM 4215 5504176 - 5504146 - g 75 -10.4 -3.74693 | CTCGATCCCAGCAAA GCGCCCGTGCATAA CAA CTATGCGCAGGCAC TTGCCAAGACAGGAC Acid345_4645 5503522 - 5504571 + | TPR repeat-containing protein TERM 4216 5504584 - 5504613 + F 100 -19.3 -3.80573 | overlap 5504589 TAGATCGTGGATTCC GGGAGCGGCGGCC TGCG GGCCGCCGTTTCC TTTGCTCGTAATACG TERM 4217 5504589 - 5504608 + F 100 -16.4 -4.11623 | overlap 5504584 CGTGGATTCCGGGAG CGGCGGCC TGCG GGCCGCCG TTTCCTTTGCTCGTA Acid345_4646 5504652 - 5505878 + | molybdopterin molybdochelatase TERM 4218 5505975 - 5505957 - g 86 -6.7 -5.00616 | gap 1 GTCGCGGCGAAAAAA CCGACGGT GCGT ACCG-CGG AAGCAAGTGCGCAGG Acid345_4647 5505882 - 5506370 + | GTP cyclohydrolase subunit MoaC Acid345_4648 5506398 - 5507159 + | response regulator receiver protein TERM 4219 5507205 - 5507221 + F 72 -11.5 -3.05384 | overlap 5507198 AGGTCCTTCGACTCC GCCGTGC TTC GCGCGGC TTCGCTCAGGACGAC Acid345_4649 5507276 - 5507758 + | molybdopterin adenylyltransferase Acid345_4650 5507829 - 5508764 + | hypothetical protein Acid345_4651 5508768 - 5509814 + | membrane-bound metal-dependent hydrolase Acid345_4652 5509849 - 5510448 + | hypothetical protein TERM 4220 5510486 - 5510469 - T 86 -12.7 -3.65812 | opp_overlap 5510469 TTCGCTGGAACAGAA GGCCGGA GAAA TCCGGCC TTTTCCTTTGTCCGA TERM 4221 5510469 - 5510486 + T 100 -12.7 -4.61873 | opp_overlap 5510469 TTCGCTGGAACAGAA GGCCGGA GAAA TCCGGCC TTTTCCTTTGTCCGA Acid345_4653 5511258 - 5510620 - | hypothetical protein Acid345_4654 5511702 - 5511298 - | response regulator receiver protein Acid345_4655 5512076 - 5511699 - | response regulator receiver protein TERM 4222 5514090 - 5514073 - g 100 -12.7 -4.42464 | AAGGGCGTAAAGAAA GAGCGCG GCAC CGCGCTC GCCGGACAAACCTTC Acid345_4656 5512291 - 5514312 + | DNA ligase, NAD-dependent Acid345_4657 5516030 - 5514627 - | serine phosphatase TERM 4223 5515906 - 5515893 - G 70 -3.7 -4.60889 | overlap 5515894 AATCAGCCCGAAAAA TGCGG TGAT CCGCT GGCGCGGCCGCGAGA TERM 4224 5516088 - 5516069 - R 100 -9.3 -4.93877 | opp_overlap 5516069 CCGGACGAAAGAAAA GGGAGAG TGCTGG CTCTCCC TTTCGCCGAAGCCCT TERM 4225 5516069 - 5516088 + r 71 -10 -3.53091 | opp_overlap 5516069 CCGGACGAAAGAAAA GGGAGAGT GCTG GCTCTCCC TTTCGCCGAAGCCCT Acid345_4658 5516994 - 5516116 - | PRC-barrel protein Acid345_4659 5517398 - 5517075 - | hypothetical protein Acid345_4660 5517882 - 5517400 - | histidine triad (HIT) protein Acid345_4661 5518376 - 5520205 + | SSU ribosomal protein S1P TERM 4226 5520223 - 5520248 + T 100 -16.9 -3.73068 | opp_overlap 5520218 5520227, overlap 5520227 TGGAACGGAAGTGAG CGAAGGCCGCC GAAA GGCGGCCTTTG TTATTGCATTAGAAA TERM 4227 5520244 - 5520227 - T 91 -14.1 -3.10112 | opp_overlap 5520223 5520227, overlap 5520218 ACGGAAGTGAGCGAA GGCCGCC GAAA GGCGGCC TTTGTTATTGCATTA TERM 4228 5520227 - 5520244 + T 100 -14.1 -4.4846 | opp_overlap 5520227 5520218, overlap 5520223 ACGGAAGTGAGCGAA GGCCGCC GAAA GGCGGCC TTTGTTATTGCATTA Acid345_4662 5520652 - 5520275 - | hypothetical protein Acid345_4663 5521141 - 5520692 - | hypothetical protein TERM 4229 5521040 - 5521009 - G 78 -11.4 -3.724 | opp_overlap 5521007 5521009 5521020, overlap 5521012 AACCCAGGAAGAGAA GCAGCGCCGCGGCG ATGA CGCGACGGCGCGAC AGTGCGAAGACGCTG TERM 4230 5521037 - 5521012 - G 77 -13.9 -2.95751 | opp_overlap 5521009 5521007 5521020, overlap 5521009 CCAGGAAGAGAAGCA GCGCCGCGGCG ATGA CGCGACGGCGC GACAGTGCGAAGACG TERM 4231 5521020 - 5521078 + g 70 -4.6 -4.45068 | gap 3, opp_overlap 5521012 5521009, overlap 5521009 5521007 AGAAGCAGCGCCGCG GCGATGA-CGCGACGGCGCGACAGT-GCG AAGA CGCTGCTGTTAC-TCGTCGCCATCCTCGC TTTCTTCTTCCAACT TERM 4232 5522198 - 5522218 + G 71 -11.1 -3.29043 | opp_overlap 5522200, overlap 5522200 GGCGATACGACGCAG AACCCGCAC ACG GTGCGGGTG TTCTCCGAAGGCGTT TERM 4233 5522216 - 5522200 - g 83 -13.7 -3.38768 | opp_overlap 5522198 5522200 CGATACGACGCAGAA CCCGCAC ACG GTGCGGG TGTTCTCCGAAGGCG TERM 4234 5522200 - 5522216 + G 82 -13.7 -3.21276 | opp_overlap 5522200, overlap 5522198 CGATACGACGCAGAA CCCGCAC ACG GTGCGGG TGTTCTCCGAAGGCG Acid345_4664 5521295 - 5522875 + | peptidase M28 Acid345_4665 5522900 - 5523757 + | rhomboid-like protein Acid345_4666 5524062 - 5523754 - | hypothetical protein TERM 4235 5524359 - 5524373 + G 85 -11.4 -4.02108 | opp_overlap 5524351 5524349 ACGAAGACCGCATCG GCGGCT TCC AGCCGC TTTCGTTCTGGTGCG Acid345_4667 5524160 - 5524528 + | glyoxalase/bleomycin resistance protein/dioxygenase Acid345_4668 5524908 - 5524525 - | 4-oxalocrotonate tautomerase TERM 4236 5524633 - 5524647 + g 81 -11.4 -3.8709 | CACCTGCTGGTGCAG GCCGTC GGC GACGGC TTTGTAGAACGCTTT Acid345_4669 5526828 - 5525299 - | pyruvate kinase TERM 4237 5526213 - 5526226 + g 75 -5.2 -4.56597 | opp_overlap 5526205 CGAATGAGATGGCAA CGGC ATCCAC GCCG TTTTTCAGACCGAAC Acid345_4670 5527726 - 5526836 - | ribonuclease BN, putative Acid345_4671 5528513 - 5528118 - | hypothetical protein TERM 4238 5528551 - 5528565 + r 72 -11.4 -3.06183 | overlap 5528548 GGGTCCTTCGACTGC GCACGC TGC GCGTGC TTCGCTCAGGATGAC Acid345_4672 5529113 - 5528727 - | PilT protein-like Acid345_4673 5529501 - 5529106 - | AbrB family transcriptional regulator TERM 4239 5529201 - 5529211 + g 74 -8.2 -4.16943 | CGTATTCTTGTGCCT CCGC AAT GCGG TTTTCCAGTGTGGAG Acid345_4674 5529877 - 5530245 + | hypothetical protein TERM 4240 5530322 - 5530295 - T 100 -14.2 -5.38497 | opp_overlap 5530298, overlap 5530298 ATCCAAAGCAAAAAA TAAGGGCGACCA CGAA TGGTCGCCCTTT GATGGATTGAAGCTG TERM 4241 5530319 - 5530298 - T 100 -15.9 -4.76088 | opp_overlap 5530298, overlap 5530295 CAAAGCAAAAAATAA GGGCGACCA CGAA TGGTCGCCC TTTGATGGATTGAAG TERM 4242 5530298 - 5530319 + T 100 -15.9 -3.794 | opp_overlap 5530298 5530295 CAAAGCAAAAAATAA GGGCGACCA CGAA TGGTCGCCC TTTGATGGATTGAAG TERM 4243 5530343 - 5530367 + T 83 -10.7 -3.9344 | overlap 5530342 5530344 ATTGAAGCTGGTTAT TCGGCGACGAG TTC TTCGTTGCCGG TTTCGTCTTCGCCTT TERM 4244 5530344 - 5530366 + T 75 -12 -2.95341 | overlap 5530342 5530343 TTGAAGCTGGTTATT CGGCGACGAG TTC TTCGTTGCCG GTTTCGTCTTCGCCT Acid345_4675 5534676 - 5530339 - | DNA-directed RNA polymerase, subunit beta-prime TERM 4245 5534728 - 5534697 - R 84 -13.8 -3.10701 | gap 1, opp_overlap 5534696, overlap 5534686 GAAAGAGCGAGGGAA CGTCCCCACCCTAGC TTC GCTAGAGTGGGG-CA CCCTTAGTCGGCGGC Acid345_4676 5539201 - 5534732 - | DNA-directed RNA polymerase, beta subunit TERM 4246 5539173 - 5539185 + g 81 -3.4 -5.18371 | GAGAAGTCTTGACGG TTGC GGAAG GCAA TTTTCTTTTCTGCCA TERM 4247 5539212 - 5539230 + r 81 -2.3 -5.40072 | overlap 5539214 GCCATTTAATAACTC CTGAGGG TGTGC CCTTCCG TTTTTTTCACAAAGG TERM 4248 5539439 - 5539409 - R 88 -9.8 -4.49937 | opp_overlap 5539416 TTAAGAACAGGAAAA CGCAAAACGTGT GCTGGCA ACACGGTTTGCG ACTGAAAACACGTAT Acid345_4677 5540259 - 5539879 - | 50S ribosomal protein L12P Acid345_4678 5541197 - 5540649 - | 50S ribosomal protein L10P Acid345_4679 5541928 - 5541221 - | 50S ribosomal protein L1P TERM 4249 5541944 - 5541975 + r 71 -10.1 -3.57144 | GTTGCTCCTTGTCTT CCACCGCGCACCG TTACGT TGGTGTGCCGTGG TTTACGACTCAGGGG Acid345_4680 5542484 - 5542053 - | 50S ribosomal protein L11P TERM 4250 5542572 - 5542592 + r 71 -9.6 -3.53811 | opp_overlap 5542570 5542571, overlap 5542574 GCCCTGATACAAATC GCGGCGGC GCAAA GCCGCCTC TTTCACAAACCTACG TERM 4251 5542574 - 5542590 + r 73 -10.8 -3.34715 | opp_overlap 5542570 5542571, overlap 5542572 CCTGATACAAATCGC GGCGGC GCAAA GCCGCC TCTTTCACAAACCTA Acid345_4681 5543202 - 5542603 - | transcription antitermination protein nusG Acid345_4682 5543472 - 5543212 - | SecE subunit of protein translocation complex Acid345_4683 5543762 - 5543610 - | 50S ribosomal protein L33P Acid345_4684 5545089 - 5543902 - | elongation factor Tu Acid345_4685 5545450 - 5545100 - | hypothetical protein TERM 4252 5546139 - 5546157 + H 83 -10.3 -3.99405 | opp_overlap 5546147, overlap 5546142 CTCAGCCTTACGGCC CGCGAAG ACGCG CTTCGCG TTTCTACTGCCTTCG Acid345_4686 5546710 - 5547780 + | hypothetical protein Acid345_4687 5548577 - 5547783 - | putative anti-sigma factor Acid345_4688 5549095 - 5548574 - | RNA polymerase sigma factor TERM 4253 5549120 - 5549130 + H 70 -6.8 -4.15044 | CCGGTACAGACTCTC CTCG AAG CGAG TTTATTCCCGACGAG Acid345_4689 5549221 - 5550180 + | metallophosphoesterase Acid345_4690 5550332 - 5550550 + | plastocyanin like protein Acid345_4691 5550552 - 5550983 + | rubrerythrin-like TERM 4254 5551104 - 5551130 + T 80 -10.8 -3.86944 | opp_overlap 5551108, overlap 5551108 ATGCAGCTACAAAAC AAAAGGCGCTCG TTG CGAGCGCCTTAG TTTGATGGTTATAAA TERM 4255 5551126 - 5551108 - T 100 -16 -5.19275 | opp_overlap 5551104 5551108 AGCTACAAAACAAAA GGCGCTCG TTG CGAGCGCC TTAGTTTGATGGTTA TERM 4256 5551108 - 5551126 + T 100 -16 -3.59233 | opp_overlap 5551108, overlap 5551104 AGCTACAAAACAAAA GGCGCTCG TTG CGAGCGCC TTAGTTTGATGGTTA Acid345_4692 5552060 - 5551152 - | peptidase M23B TERM 4257 5552640 - 5552658 + r 76 -3 -5.055 | overlap 5552643 GACGCATGGCACTCG GCACAGTG AGC CCCTGTAC TTTTTTACGGCTTGG Acid345_4693 5554360 - 5552663 - | amidohydrolase 3 Acid345_4694 5554479 - 5555435 + | thiamine-monophosphate kinase Acid345_4695 5555439 - 5556059 + | nuclease-related protein Acid345_4696 5556071 - 5556784 + | hypothetical protein Acid345_4697 5556866 - 5558452 + | carboxyl transferase TERM 4258 5558498 - 5558454 - f 77 -11.6 -3.5525 | gap 1, opp_overlap 5558454 5558452 5558451, overlap 5558457 5558459 ATATACCGCTGTAAA TGA-GAGGTTGCCTGAACGAA GCTC TTCATTCTGGCAACCTCCTCC TCGTTTCTTCCTCTC TERM 4259 5558494 - 5558457 - f 95 -17.9 -2.90813 | opp_overlap 5558454 5558452 5558451, overlap 5558454 5558459 TACCGCTGTAAATGA GAGGTTGCCTGAACGAA GCTC TTCATTCTGGCAACCTC CTCCTCGTTTCTTCC TERM 4260 5558492 - 5558459 - f 86 -14.7 -3.00525 | opp_overlap 5558454 5558452 5558451, overlap 5558457 5558454 CCGCTGTAAATGAGA GGTTGCCTGAACGAA GCTC TTCATTCTGGCAACC TCCTCCTCGTTTCTT Acid345_4698 5558546 - 5558851 + | hypothetical protein TERM 4261 5558870 - 5558887 + F 100 -12.7 -4.87626 | opp_overlap 5558870 TTGCTGCAACGACAA GGCCGCT TTCG AGCGGCC TTTTTAGTGTTCACC TERM 4262 5558887 - 5558870 - f 85 -12.7 -3.50853 | opp_overlap 5558870 TTGCTGCAACGACAA GGCCGCT TTCG AGCGGCC TTTTTAGTGTTCACC Acid345_4699 5558924 - 5559199 + | hypothetical protein Acid345_4700 5559199 - 5559813 + | hypothetical protein Acid345_4701 5560766 - 5559921 - | acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha Acid345_4702 5561342 - 5560806 - | cob(I)yrinic acid a,c-diamide adenosyltransferase TERM 4263 5561368 - 5561346 - H 82 -11.3 -3.86194 | opp_overlap 5561341 5561346 AACGTCTGCCATAAA GGTTCACCC ACGCA GGGCGAACC TCTGATTGTAAATGG Acid345_4703 5561438 - 5561986 + | hypothetical protein TERM 4264 5562102 - 5562070 - T 85 -4.7 -5.25699 | opp_overlap 5562077, overlap 5562072 5562077 ATGACAGAACAAAAA GATTAAAGGCAGGGA CAT TCCCTGCCTTGGTGC AAATCCCGAAATCCA TERM 4265 5562100 - 5562072 - T 71 -5.9 -4.24787 | opp_overlap 5562077, overlap 5562070 5562077 GACAGAACAAAAAGA TTAAAGGCAGGGA CAT TCCCTGCCTTGGT GCAAATCCCGAAATC TERM 4266 5562095 - 5562077 - T 100 -14.6 -4.17513 | opp_overlap 5562077, overlap 5562072 5562070 AACAAAAAGATTAAA GGCAGGGA CAT TCCCTGCC TTGGTGCAAATCCCG TERM 4267 5562077 - 5562095 + T 91 -14.6 -3.15544 | opp_overlap 5562077 5562072 5562070 AACAAAAAGATTAAA GGCAGGGA CAT TCCCTGCC TTGGTGCAAATCCCG Acid345_4704 5562402 - 5562121 - | histone-like DNA-binding protein TERM 4268 5562371 - 5562393 + g 71 -7.1 -4.24342 | gap 1 ATGCCCGAAGCTGCA GCG-ATCTTG TCCA CAAGATCCGC TTTGTTCATGAAGCC TERM 4269 5562407 - 5562464 + r 83 -6.2 -4.83615 | GCTTTGTTCATGAAG CCTCCTCGCAGGGCCCCAGCCC-CTTGG CAAT TCAGGAGGGATTAG-CCTTGCGCGGAGG TTTTTATCCCGCGTA Acid345_4705 5565004 - 5562542 - | glycoside hydrolase family protein TERM 4270 5565053 - 5565043 - R 74 -4.6 -4.70659 | TTTTAGATGCAAAAA CCCA TTG CGGG GATTAAGTGCCTGAA TERM 4271 5565100 - 5565079 - R 95 -7.1 -5.28983 | overlap 5565080 5565081 CTGAAAACACAAAAA TTGGCGGGC CGAA GCCCGCCGT CCGGAGAAGTGAAAG TERM 4272 5565099 - 5565080 - R 76 -10.6 -3.75763 | overlap 5565079 5565081 TGAAAACACAAAAAT TGGCGGGC CGAA GCCCGCCG TCCGGAGAAGTGAAA TERM 4273 5565098 - 5565081 - R 83 -14.1 -2.83831 | overlap 5565080 5565079 GAAAACACAAAAATT GGCGGGC CGAA GCCCGCC GTCCGGAGAAGTGAA Acid345_4706 5566447 - 5565131 - | isocitrate lyase TERM 4274 5566244 - 5566264 + g 72 -6.1 -4.34263 | opp_overlap 5566248, overlap 5566246 CTGGTTGCCGGTCAA TGCACCGAG CGC CTGGGTGTA TTTGTCTTCTTGAAG Acid345_4707 5568297 - 5566723 - | malate synthase TERM 4275 5568334 - 5568315 - R 71 -4.8 -4.56597 | overlap 5568317 TTCCTCTTCGAAAAA CAGCGGCC ATCC GGTCGCGG CGAGAGCAATACAGA Acid345_4708 5569186 - 5568443 - | class II aldolase/adducin-like TERM 4276 5569262 - 5569249 - H 100 -3.9 -6.17669 | overlap 5569257 5569260 AAGAAAAGAAAAAAA TGAAT AGAC ATTCA GTGACAACAGTTGCA TERM 4277 5569943 - 5569919 - g 93 -11.3 -4.60487 | opp_overlap 5569939, overlap 5569933 TACGATCCGCAAAAA GCGCGCGAGCA GAA CGCCCTCGCGC AGGCCGGCATGCAGG Acid345_4709 5569484 - 5570098 + | hypothetical protein Acid345_4710 5570208 - 5572022 + | integrin-like protein Acid345_4711 5575039 - 5572049 - | hypothetical protein TERM 4278 5572574 - 5572587 + g 72 -5.9 -4.42386 | TTGAGCGCCAAACTG CGGCG TGCT CGTCG TTTTGTAGGTGGAGA TERM 4279 5574819 - 5574793 - G 78 -8.7 -4.16016 | TCACCCCGGAAGAAA GACCGGTAGCG CTAAC CGATACCGATC CGGAGTAGCCGCCCT Acid345_4712 5576011 - 5575388 - | DNA-3-methyladenine glycosylase TERM 4280 5575796 - 5575812 + g 71 -7.9 -4.07568 | opp_overlap 5575795 5575798, overlap 5575799 GGGAGGCCCGAAGAG CACCGCG TTG CGCGCTG TTTTGCCCGCAGCGG TERM 4281 5576848 - 5576829 - H 100 -5 -5.55769 | overlap 5576837 TGGCAGAAGAAAAAA GGCGAA TACGCGAG TTCGCC CGCGAAAGTGGAAGT Acid345_4714 5576868 - 5577905 + | hypothetical protein Acid345_4715 5578830 - 5577910 - | dipeptidyl aminopeptidases/acylaminoacyl-peptidases-like gatB 5580360 - 5578885 - | aspartyl/glutamyl-tRNA amidotransferase subunit B Acid345_4717 5581038 - 5580385 - | hypothetical protein Acid345_4718 5581086 - 5582417 + | three-deoxy-D-manno-octulosonic-acid transferase-like TERM 4282 5583061 - 5583076 + G 72 -6 -4.4009 | opp_overlap 5583050 GCAACTCAGTCGGAA CGCCCG AGTG CTGGCG TTTTGTGCCATAGCG Acid345_4719 5582414 - 5583382 + | lipid-A-disaccharide synthase Acid345_4720 5583392 - 5584267 + | ADP-heptose synthase bifunctional sugar kinase/adenylyltransferase-like Acid345_4721 5584412 - 5585368 + | glycosyl transferase family protein Acid345_4722 5585361 - 5585918 + | S-isoprenylcysteine methyltransferase-like protein Acid345_4723 5585932 - 5586744 + | hypothetical protein Acid345_4724 5587020 - 5586745 - | hypothetical protein Acid345_4725 5587251 - 5587859 + | Holliday junction DNA helicase RuvA Acid345_4726 5587862 - 5588602 + | hypothetical protein Acid345_4727 5589860 - 5588595 - | hypothetical protein Acid345_4728 5590047 - 5592203 + | TPR repeat-containing protein Acid345_4729 5593570 - 5592206 - | tRNA modification GTPase TrmE TERM 4283 5593489 - 5593468 - G 77 -12.3 -3.55487 | overlap 5593471 CGAGACGAAGCATAA GAAGCGCGA CAGT TCGCGCCTC GGGGCCGGCAAGGCG TERM 4284 5593486 - 5593471 - G 77 -10.4 -3.90241 | overlap 5593468 GACGAAGCATAAGAA GCGCGA CAGT TCGCGC CTCGGGGCCGGCAAG Acid345_4730 5594450 - 5593590 - | cyclic nucleotide-binding protein Acid345_4731 5594994 - 5594557 - | CBS domain-containing protein TERM 4285 5595047 - 5595032 - R 100 -11.8 -4.72272 | opp_overlap 5595032 5595040 CCTGGGCACGAAAAA GCCGCC CGCG GGCGGC TTTAGAAAAGTTGTT TERM 4286 5595032 - 5595047 + r 81 -11.8 -3.56366 | opp_overlap 5595032, overlap 5595040 CCTGGGCACGAAAAA GCCGCC CGCG GGCGGC TTTAGAAAAGTTGTT Acid345_4732 5595814 - 5595068 - | hypothetical protein TERM 4287 5595916 - 5595903 - R 83 -9.5 -4.07568 | opp_overlap 5595903, overlap 5595882 GCCTTCGTTGGAAAA CCGGC GAGC GCCGG TTATGAGAGCGTGAT Acid345_4733 5596705 - 5595917 - | ABC transporter, ATPase subunit Acid345_4734 5597442 - 5596708 - | hypothetical protein Acid345_4735 5597502 - 5597828 + | hypothetical protein TERM 4288 5597984 - 5597971 - g 72 -4.5 -4.64464 | CAAATCAAAGTAAAA CTCCC CGAC GGAAG CGTAAAAGAAGTCTC TERM 4289 5598057 - 5598031 - g 90 -12.2 -4.16943 | opp_overlap 5598030 5598049 CTCGATATCGCAAAA GGCATCAGCCCG CGC CTGGCCGACGCC GCTTTGGCCGCGAAG Acid345_4736 5597947 - 5599926 + | Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase Acid345_4737 5600504 - 5601028 + | NUDIX hydrolase Acid345_4738 5602747 - 5601050 - | sulfate transporter Acid345_4739 5603145 - 5602837 - | hypothetical protein Acid345_4740 5605135 - 5603366 - | amidohydrolase 3 TERM 4290 5604910 - 5604920 + g 74 -6.8 -4.34263 | GGAAACCGCCATGCA GGTC CGT GACC TTTGTATTCTTCCCG TERM 4291 5604990 - 5604976 - G 71 -7.1 -4.14627 | CGCCTACATAAACAA TGCGC CCTTC GCGCA CGGCCACAGCTTCTG TERM 4292 5605758 - 5605777 + G 77 -2 -5.06414 | overlap 5605760 CGCAGACGCATTTCG TCTCCCCG AACC CGGGCACA TTTTTGTTACCACCG Acid345_4741 5605264 - 5606181 + | methyltransferase type 11 TERM 4293 5606645 - 5606676 + G 73 -2.8 -4.83615 | gap 1, overlap 5606635 GCTGATGTTCTGGGT GCAGTGGCGCGT-CG ATG CGCGCGCGGAACGGC TTTTTCTCGCCGATC Acid345_4742 5606178 - 5606714 + | hypothetical protein Acid345_4743 5607593 - 5606718 - | pantothenate synthetase Acid345_4744 5608586 - 5607687 - | metallophosphoesterase TERM 4294 5608370 - 5608382 + g 86 -9.1 -4.59109 | TTTCGCGGGCCTCAT CCCAG TCG CTGGG TTTTTCGCCGATGTC Acid345_4745 5609268 - 5608654 - | hypothetical protein TERM 4295 5608790 - 5608801 + g 72 -5.8 -4.48987 | ACGATGGTCTCGTTC CAGC GCTG GCTG TTTTCGTTATAGCGG TERM 4296 5609297 - 5609261 - G 100 -12.4 -4.55798 | gap 1, overlap 5609248 5609246 TAGGGTAAAGCAAAA TGCCCCACTCT-ACGGA CGAA CCCGCCAGAATGGGGCA CTCGAATTTCCGAAC Acid345_4746 5610207 - 5609320 - | 3-methyl-2-oxobutanoate hydroxymethyltransferase Acid345_4747 5612792 - 5610387 - | cell surface glycoprotein (s-layer protein) related protein-like Acid345_4748 5613694 - 5613029 - | deoxynucleoside kinase Acid345_4749 5613798 - 5614520 + | polysaccharide deacetylase Acid345_4750 5614887 - 5615447 + | isochorismatase hydrolase TERM 4297 5615484 - 5615453 - T 71 -10.3 -3.29739 | gap 2 TGTAACTTAGAGGAA CGC-TTACGC-GACG GGCA CGTCCGCGTAACGCG GTGGGGCGCTCAGTC Acid345_4751 5615857 - 5615456 - | hypothetical protein TERM 4298 5615915 - 5615932 + r 83 -12.7 -3.17194 | opp_overlap 5615915 ACGCCCAAAAGGAAA GGGCACC GCGC GGTGCCC TTCGATTCCCAAAGT TERM 4299 5615932 - 5615915 - R 95 -12.7 -4.20136 | opp_overlap 5615915 ACGCCCAAAAGGAAA GGGCACC GCGC GGTGCCC TTCGATTCCCAAAGT Acid345_4752 5616331 - 5615954 - | hypothetical protein TERM 4300 5616415 - 5616384 - R 100 -19.6 -3.7795 | opp_overlap 5616388 5616391, overlap 5616386 5616391 GGAAAGTTTATGAAA CACAGAAGGGCACC ATGC GGTGCCCTTCTGTA TCGAAACTAATAACC TERM 4301 5616413 - 5616386 - R 100 -20 -3.46936 | opp_overlap 5616388 5616391, overlap 5616384 5616391 AAAGTTTATGAAACA CAGAAGGGCACC ATGC GGTGCCCTTCTG TATCGAAACTAATAA TERM 4302 5616388 - 5616411 + r 93 -16.8 -2.8805 | opp_overlap 5616386 5616384 5616391, overlap 5616391 AGTTTATGAAACACA GAAGGGCACC ATGC GGTGCCCTTC TGTATCGAAACTAAT TERM 4303 5616391 - 5616408 + r 85 -12.7 -3.58905 | opp_overlap 5616386 5616384 5616391, overlap 5616388 TTATGAAACACAGAA GGGCACC ATGC GGTGCCC TTCTGTATCGAAACT TERM 4304 5616408 - 5616391 - R 90 -12.7 -3.78419 | opp_overlap 5616391 5616388, overlap 5616386 5616384 TTATGAAACACAGAA GGGCACC ATGC GGTGCCC TTCTGTATCGAAACT Acid345_4753 5618538 - 5616433 - | translation elongation factor G Acid345_4754 5618954 - 5619577 + | hypothetical protein TERM 4305 5619605 - 5619624 + F 95 -12.2 -4.40003 | TTGAAAGCCCGTGGA CTGCACCA GAAA TGGTGCAG TTTGTCTTTATCCCG Acid345_4755 5619961 - 5620371 + | small multidrug resistance protein TERM 4306 5620410 - 5620390 - T 100 -13.3 -5.5112 | opp_overlap 5620390 TTCACCAACAAAAAA GGAGTGGCC CCG AGCCACTCC TTTTTCACTTCTCGC TERM 4307 5620390 - 5620410 + T 100 -12.6 -4.78149 | opp_overlap 5620390 TTCACCAACAAAAAA GGAGTGGC CCCGA GCCACTCC TTTTTCACTTCTCGC Acid345_4756 5621088 - 5620519 - | hypothetical protein Acid345_4757 5622248 - 5621172 - | aldo/keto reductase Acid345_4758 5622313 - 5623113 + | hypothetical protein Acid345_4759 5623175 - 5623879 + | hypothetical protein TERM 4308 5624137 - 5624181 + T 79 -7.8 -4.43397 | gap 1, opp_overlap 5624128, overlap 5624138 5624139 CTCAAACGGCGCTGT CATGCCGG-GGGAGACGCCTA TGTT TAGGCTTCTCCCGCCCGCAAC TTGTTTGTTTTGAAG TERM 4309 5624138 - 5624180 + T 74 -11.3 -3.24954 | gap 1, opp_overlap 5624128, overlap 5624137 5624139 TCAAACGGCGCTGTC ATGCCGG-GGGAGACGCCTA TGTT TAGGCTTCTCCCGCCCGCAA CTTGTTTGTTTTGAA TERM 4310 5624139 - 5624179 + T 83 -14.8 -2.53888 | gap 1, opp_overlap 5624128, overlap 5624138 5624137 CAAACGGCGCTGTCA TGCCGG-GGGAGACGCCTA TGTT TAGGCTTCTCCCGCCCGCA ACTTGTTTGTTTTGA Acid345_4760 5625679 - 5624297 - | microcin-processing peptidase 1 TERM 4311 5625578 - 5625595 + g 78 -14.1 -2.50994 | overlap 5625577 GCGCAGCACGACTTC GGCGGCG GTCG CGCCGCC CTTCATCGCCTTGCG Acid345_4761 5627103 - 5625676 - | microcin-processing peptidase 2 TERM 4312 5628328 - 5628354 + G 73 -12.2 -3.08464 | ATCACTCCGATCCGA TCCATCGCGCCG TGC CGGAGCGCTGGA TTGAATCCATGATCG Acid345_4762 5627256 - 5628812 + | hypothetical protein Acid345_4763 5629333 - 5628794 - | hypothetical protein Acid345_4764 5629449 - 5630231 + | hypothetical protein TERM 4313 5630237 - 5630291 + T 81 -14.5 -2.61484 | gap 1, opp_overlap 5630239 5630249 5630254, overlap 5630254 TGCCCACTAAAATTT AACGAGCAATAACAAAAGCGGGACCG AACC TGGTCCCGCTTTT-TGCTTGCTCGTC TGGATTACTTCGTCT TERM 4314 5630289 - 5630239 - T 100 -16.4 -3.39521 | gap 1, opp_overlap 5630237 5630254, overlap 5630249 5630254 CCCACTAAAATTTAA CGAGCAATAACAAAAGCGGGACC GAACCT GGTCCCGCTTTT-TGCTTGCTCG TCTGGATTACTTCGT TERM 4315 5630280 - 5630249 - T 90 -13.1 -3.77722 | opp_overlap 5630237 5630254, overlap 5630239 5630254 TTTAACGAGCAATAA CAAAAGCGGGACC GAACCT GGTCCCGCTTTTT GCTTGCTCGTCTGGA TERM 4316 5630275 - 5630254 - T 100 -13 -4.92757 | opp_overlap 5630254 5630237, overlap 5630249 5630239 CGAGCAATAACAAAA GCGGGACC GAACCT GGTCCCGC TTTTTGCTTGCTCGT TERM 4317 5630254 - 5630275 + T 100 -13.7 -4.90869 | opp_overlap 5630249 5630239 5630254, overlap 5630237 CGAGCAATAACAAAA GCGGGACCG AACC TGGTCCCGC TTTTTGCTTGCTCGT Acid345_4765 5632932 - 5630296 - | ATPase AAA-2 TERM 4318 5631564 - 5631583 + g 85 -11.4 -3.94812 | overlap 5631571 TCAACGCGTTCGAAC GCTCGCGG AGCC CTGCGAGC TCTTTTTCAATCACG TERM 4319 5631571 - 5631585 + g 75 -5.6 -4.65895 | overlap 5631564 GTTCGAACGCTCGCG GAGCCC TGC GAGCTC TTTTTCAATCACGGC TERM 4320 5631775 - 5631823 + g 70 -11.8 -2.77899 | gap 2, opp_overlap 5631773 5631776, overlap 5631773 ATCGGGAAGGAAACG ATCGGTGAT-GTAGCGGT-GCGAC AGC GTCGCTGCCGCGACGATCGCCGAA TCCTTAATGCGCACG TERM 4321 5633024 - 5632999 - R 100 -11.9 -5.37043 | overlap 5633002 AGGGGAGAGAAAAAA CAAGGAGGTGG GTGA CCACCTCCTCA ATCACAACTCCTCTT TERM 4322 5633021 - 5633002 - R 100 -13.6 -4.77122 | overlap 5632999 GGAGAGAAAAAACAA GGAGGTGG GTGA CCACCTCC TCAATCACAACTCCT Acid345_4766 5633551 - 5633060 - | heat shock protein Hsp20 TERM 4323 5633266 - 5633279 + g 82 -6.7 -4.81852 | opp_overlap 5633243 GGCGCTCGACGCGAC GGAAG TTCT CTTCC TTTTCTTCCTTCTCG Acid345_4767 5633742 - 5634062 + | antibiotic biosynthesis monooxygenase domain-containing protein Acid345_4768 5635260 - 5634043 - | SAM-dependent methyltransferase Acid345_4769 5636037 - 5635303 - | hypothetical protein Acid345_4770 5636111 - 5636383 + | hypothetical protein Acid345_4771 5636847 - 5636380 - | hypothetical protein TERM 4324 5637962 - 5637916 - g 87 -8 -4.72986 | overlap 5637918 CACGCTGATCAAAAA GATCGCCGACCTCGTCAACGAC AAG ACCATCGACGAGATTAGCGATG TGCGCGATGAATCCG TERM 4325 5637960 - 5637918 - g 80 -10.6 -3.98256 | overlap 5637916 CGCTGATCAAAAAGA TCGCCGACCTCGTCAACGAC AAG ACCATCGACGAGATTAGCGA TGTGCGCGATGAATC TERM 4326 5639309 - 5639290 - g 87 -9.2 -4.70626 | overlap 5639291 GAAGAAGGGCAAAAA CGGCGGCG CTGA CACCGCCA ACCTCATTCTCAGCG Acid345_4772 5637050 - 5639647 + | DNA gyrase subunit A TERM 4327 5639668 - 5639687 + F 100 -11.4 -4.88407 | opp_overlap 5639668 5639657 CAAAGGAAGTGAGAA GGCCATCG TCCG CGGTGGCC TTTTTCATTGCCTGA TERM 4328 5640654 - 5640642 - g 71 -10.5 -3.53012 | opp_overlap 5640624 5640643 GTTGTGCCGCGGAAA GCGGC TGC GCCGC GAGTCGTTGTCCGTC Acid345_4773 5639770 - 5642322 + | excinuclease ABC, A subunit Acid345_4774 5642401 - 5642736 + | anti-sigma-factor antagonist Acid345_4775 5644017 - 5642824 - | hypothetical protein Acid345_4776 5644402 - 5646927 + | hypothetical protein TERM 4329 5646934 - 5646977 + F 100 -19 -4.52142 | gap 1, opp_overlap 5646934, overlap 5646937 ATCAACTGAGAACAA GTGCTTGGACGCCGGCCGC GCTAAAG GCGGCCGGCGTCCAAA-AC TTTCTGTTTTCTCGT TERM 4330 5646977 - 5646934 - f 100 -21.2 -3.85209 | gap 1, opp_overlap 5646934 5646937 ATCAACTGAGAACAA GTGCTTGGACGCCGGCCGC GCTAAAG GCGGCCGGCGTCCAAA-AC TTTCTGTTTTCTCGT TERM 4331 5646937 - 5646975 + F 100 -21.8 -2.5671 | opp_overlap 5646934, overlap 5646934 AACTGAGAACAAGTG CTTGGACGCCGGCCGC GCTAAAG GCGGCCGGCGTCCAAA ACTTTCTGTTTTCTC TERM 4332 5647283 - 5647311 + G 70 -3.7 -4.70879 | AGGATCGGGTGCGGA GCGTCCTGCAAGT CAC ACAGGTAGAACGC TTTTTCACGTTTGCC Acid345_4777 5647018 - 5647344 + | anti-sigma-factor antagonist TERM 4333 5647615 - 5647605 - g 72 -5.4 -4.43309 | opp_overlap 5647612 GAACGGCAAGGAAAA TGAG TTT CTCA TCATGCCGGGTGAGT Acid345_4778 5647396 - 5647770 + | hypothetical protein Acid345_4779 5648006 - 5647767 - | plasmid stabilization system protein Acid345_4780 5648289 - 5648047 - | CopG family transcriptional regulator Acid345_4781 5648665 - 5648321 - | alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen Acid345_4782 5648821 - 5648675 - | 2-cys peroxiredoxin TERM 4334 5648932 - 5648919 - H 81 -2.3 -5.28942 | overlap 5648920 CACGGGAAAGAAAAA CCTGC AGGT GCAGT AGGCATCGAATAGTG Acid345_4783 5648991 - 5649923 + | alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen