TransTermHP v2.07 (built on Jan 21 2009) 25 bins; sample size is 20000000 --pval-conf=/fs/szasmg2/carlk/TTupdate2/expterm.dat --gc=-2.3 --au=-0.9 --gu=1.3 --mm=3.5 --gap=6 --max-len=59 --min-stem=4 --max-loop=13 --min-loop=3 --uwin-length=6 --uwin-require=3 --max-hp-score=-2 --max-tail-score=-2.5 --loop-penalty=1,2,3,4,5,6,7,8,9,10,11 --start-cut=0 --end-cut=25 Genes: 0.331601 %AT, 3920938 nt, 29745 terms. Intergenic: 0.38353 %AT, H2T: 452245 nt, 4672 terms; T2T: 130584 nt, 2909 terms; H2H: 131912 nt, 2521 terms. Each terminator entry starts in column 3 and is of the form: term # start - end +/- regionconf hp tail | notes Followed by the sequence of the 5' tail, 5' stem, loop, 3' stem, and 3' tail. Genes are interspersed, and start the first column. SEQUENCE gi|121582466|ref|NC_008765.1| Acidovorax sp. JS42 plasmid pAOVO01, complete sequence (length 72689) Ajs_4163 324 - 64 - | hypothetical protein Ajs_4164 1057 - 332 - | peptidase M48, Ste24p TERM 1 894 - 875 - G 91 -12.1 -4.24342 | GCGCGGAGCAAGAAA GCGCGCC GACAAG GGCGCGC TGGCGTAGAAGCCGA Ajs_4165 1516 - 1133 - | hypothetical protein TERM 2 1464 - 1480 + g 83 -8.7 -4.69464 | AATATCTGGCTCATC CCCTTGC ACC GTAAGGG TTTTTGGCGTATTTT TERM 3 1619 - 1637 + G 72 -13.8 -2.94912 | opp_overlap 1602, overlap 1607 CCAGCGCCCAAGCGG CCGCCGCG AAG CGTGGCGG TGTCTGCATTGGCCC Ajs_4166 1546 - 1800 + | hypothetical protein TERM 4 2099 - 2125 + T 79 -10.8 -3.95852 | opp_overlap 2105, overlap 2100 2105 CACGGGTGGCAATTC TTGAAAGGGGGC AAG GCCCCCTTTCCC TTTACTTGCTACCGT TERM 5 2100 - 2124 + T 78 -14.3 -2.97029 | opp_overlap 2105, overlap 2099 2105 ACGGGTGGCAATTCT TGAAAGGGGGC AAG GCCCCCTTTCC CTTTACTTGCTACCG TERM 6 2119 - 2105 - T 77 -12.8 -3.57561 | opp_overlap 2100 2099 2105 TGGCAATTCTTGAAA GGGGGC AAG GCCCCC TTTCCCTTTACTTGC TERM 7 2105 - 2119 + T 83 -12.8 -3.89336 | opp_overlap 2105, overlap 2100 2099 TGGCAATTCTTGAAA GGGGGC AAG GCCCCC TTTCCCTTTACTTGC Ajs_4167 5174 - 2127 - | TraG domain-containing protein TERM 8 2890 - 2904 + g 75 -9.2 -4.09739 | overlap 2873 2899 GTGAGGGCGGCATCG CGGCCG TGG CGGTCG TTTTGGGCCGATTGA TERM 9 4050 - 4032 - G 70 -8.8 -3.94634 | GATGACGGCAAACAA GATTGGCC ACA GGCCGATC CAGGCCAGCGACATC Ajs_4168 6592 - 5186 - | TraH family protein Ajs_4169 7415 - 6603 - | hypothetical protein Ajs_4170 7782 - 7420 - | hypothetical protein Ajs_4171 9023 - 7779 - | conjugal transfer mating pair stabilization protein TraN Ajs_4172 10318 - 9020 - | hypothetical protein Ajs_4173 11091 - 10315 - | hypothetical protein Ajs_4174 12092 - 11091 - | TraU family protein Ajs_4175 12727 - 12089 - | hypothetical protein TERM 10 12168 - 12148 - G 72 -13.3 -3.14132 | opp_overlap 12155 TTCCCTGCTGACGAA TCACAGCCG GCA CGGCCGTGA TGCCGAACCGTTTGG TERM 11 12366 - 12346 - G 70 -2.5 -4.63218 | opp_overlap 12346 GGCCGTCGAAGAAAA CCAGCGT CTTCGTC AGGCTGG TCATGTCCAGCGGGT Ajs_4176 13190 - 12714 - | hypothetical protein Ajs_4177 13618 - 13190 - | hypothetical protein Ajs_4178 16232 - 13608 - | hypothetical protein Ajs_4179 16920 - 16270 - | membrane lipoprotein lipid attachment site Ajs_4180 17812 - 17063 - | protein-disulfide isomerase TERM 12 17502 - 17526 + g 79 -4.9 -4.75472 | overlap 17517 GTCTTGATCGCTTGG CCAAGTTGCTG TGC CGGGAACTCGG TTTTCTTGCTATCGA Ajs_4181 19154 - 17805 - | TraB pilus assembly family protein TERM 13 19103 - 19124 + g 91 -9.5 -4.83246 | gap 1, opp_overlap 19089 TGCCGGTCACTGCCC CGCC-GATGA GCA TCATCTGGCG TTTCTTTGTTTGTGC Ajs_4182 19884 - 19147 - | hypothetical protein Ajs_4183 20413 - 19820 - | hypothetical protein Ajs_4184 20721 - 20428 - | hypothetical protein TERM 14 20579 - 20554 - G 82 -6.1 -4.82901 | CTTCCCGTAGAAAAA GGCCGCTCC AATACCGA GGAACAGCC CAATCACCGGGAAGC Ajs_4185 21069 - 20737 - | hypothetical protein Ajs_4186 21547 - 21164 - | hypothetical protein Ajs_4187 22049 - 21549 - | lytic transglycosylase, catalytic TERM 15 22294 - 22278 - H 72 -3.7 -4.56153 | GTAGGAGAAAAATAA CTTCC TGTCAGC GGAAG CAATAGGTTAGATGG Ajs_4188 22495 - 23154 + | two component LuxR family transcriptional regulator Ajs_4189 24091 - 23123 - | integral membrane sensor signal transduction histidine kinase Ajs_4190 24375 - 24100 - | hypothetical protein Ajs_4191 25263 - 24409 - | hypothetical protein Ajs_4192 28593 - 25708 - | TrwC protein TERM 16 26237 - 26255 + g 82 -4.5 -4.85396 | overlap 26233 26231 GCCAGCTCGCGGGTG TCGCGGT CGTAC ACCTCGA TTTTGTTGTGCTTCT Ajs_4193 29045 - 28590 - | putative thiol:disulfide interchange transmembrane protein TERM 17 29006 - 28990 - G 100 -10.8 -4.81851 | ACGGAAACGCAAAAA GCCGCC AAGCA GGCGGC CGCGACGGAATGTAT Ajs_4194 31054 - 29057 - | hypothetical protein TERM 18 29173 - 29189 + g 72 -5.1 -4.41494 | TTTCGCCGGTTGCCT TGTCGAT CAC ATCGCCA TTTTCGTTGCGCATA Ajs_4195 31433 - 31056 - | hypothetical protein TERM 19 31232 - 31263 + g 73 -13.8 -3.09919 | gap 1, opp_overlap 31241 31242, overlap 31223 31234 CGCCAGCGCGGATTT CATCGAGAAGGCGGC GCA GCCGC-TGCTCGATG TCTTGCACGTTTTCT TERM 20 31516 - 31533 + H 73 -8.3 -4.07568 | opp_overlap 31516 GTCGCCACGCTAAAA GGCGCGC CACA GCGCGGC TTTTAGCACCGGCAA TERM 21 31533 - 31516 - H 76 -8.3 -4.13767 | opp_overlap 31516 GTCGCCACGCTAAAA GGCGCGC CACA GCGCGGC TTTTAGCACCGGCAA TERM 22 31565 - 31618 + H 100 -18.1 -3.57144 | opp_overlap 31613, overlap 31567 31569 CATGTTGCGTGGTGT GTGACCGTTCTTCCGGGGCGCGGGG CTTG CCCTGCGAACTGGAAGAACGGTGCC TTTCCACCTCCCAGG TERM 23 31567 - 31617 + H 87 -19.1 -2.74144 | gap 1, opp_overlap 31613, overlap 31565 31569 TGTTGCGTGGTGTGT G-ACCGTTCTTCCGGGGCGCGGGG CTTG CCCTGCGAACTGGAAGAACGGTGC CTTTCCACCTCCCAG TERM 24 31569 - 31614 + H 100 -21.9 -2.64803 | opp_overlap 31613, overlap 31567 31565 TTGCGTGGTGTGTGA CCGTTCTTCCGGGGCGCGGGG CTTG CCCTGCGAACTGGAAGAACGG TGCCTTTCCACCTCC TERM 25 31895 - 31936 + G 79 -16.1 -2.84325 | gap 1, opp_overlap 31889 31902 31910, overlap 31889 31897 31929 31933 AAACCAGAAGGCCGT GATGGAACT-CATCAAGACG GAA CGGCTTGATGCGGTTCCATC TGATCTTTGGCGCGA TERM 26 31897 - 31934 + G 70 -12.9 -2.97021 | gap 1, opp_overlap 31889 31902 31910, overlap 31895 31889 31929 31933 ACCAGAAGGCCGTGA TGGAACT-CATCAAGACG GAA CGGCTTGATGCGGTTCCA TCTGATCTTTGGCGC Ajs_4196 31746 - 32066 + | hypothetical protein Ajs_4197 32587 - 32880 + | hypothetical protein TERM 27 32988 - 32946 - T 74 -15 -2.57132 | opp_overlap 32950, overlap 32945 32950 CGGTTGCGTGACAAG GAAAGGCGAAGGCGGC GAACGAAGGAA GCCGTCTTCGCCTTTC GCACTTTCCGGCCCT TERM 28 32950 - 32984 + T 75 -12.2 -3.63968 | opp_overlap 32946 32945 32950 TGCGTGACAAGGAAA GGCGAAGGCGGC GAACGAAGGAA GCCGTCTTCGCC TTTCGCACTTTCCGG TERM 29 32984 - 32950 - T 78 -10 -3.9941 | opp_overlap 32950, overlap 32946 32945 TGCGTGACAAGGAAA GGCGAAGGCGGC GAACGAAGGAA GCCGTCTTCGCC TTTCGCACTTTCCGG TERM 30 33478 - 33528 + T 100 -16 -5.0133 | opp_overlap 33466 33481, overlap 33479 33480 GAAGCGAAGCCGGGA AAACCGGATTGGCACGGCCGGGCC GAA GGGCCGGCGGTGTCAATCCGGCGC TTTTTTGGGGAAGTG TERM 31 33479 - 33527 + T 100 -19.5 -3.60316 | opp_overlap 33466 33481, overlap 33478 33480 AAGCGAAGCCGGGAA AACCGGATTGGCACGGCCGGGCC GAA GGGCCGGCGGTGTCAATCCGGCG CTTTTTTGGGGAAGT TERM 32 33480 - 33526 + T 100 -23 -2.75708 | opp_overlap 33466 33481, overlap 33479 33478 AGCGAAGCCGGGAAA ACCGGATTGGCACGGCCGGGCC GAA GGGCCGGCGGTGTCAATCCGGC GCTTTTTTGGGGAAG TERM 33 33525 - 33481 - T 100 -24.3 -4.11484 | opp_overlap 33480 33479 33478, overlap 33466 GCGAAGCCGGGAAAA CCGGATTGGCACGGCCGGGCC GAA GGGCCGGCGGTGTCAATCCGG CGCTTTTTTGGGGAA Ajs_4198 34134 - 33517 - | resolvase domain-containing protein Ajs_4199 34378 - 34142 - | hypothetical protein Ajs_4200 34717 - 34391 - | hypothetical protein TERM 34 34469 - 34504 + g 81 -12.7 -3.76224 | opp_overlap 34469 CATGGATTGGCCAAA GTCG-GTGATCGCGTCC ACCA GGACGCGA-CACTCGGC TTTGGTCAGTCGCAC Ajs_4201 35061 - 34732 - | hypothetical protein TERM 35 34796 - 34783 - G 74 -8.1 -4.1673 | opp_overlap 34783 GAATGGCTCAACAAA GCGCA GCAG TGCGC TTTGCTCGTCCACGG TERM 36 34954 - 34966 + g 95 -5.5 -5.47218 | CAGGATCAGCGCGGC CTCGT CAG ACGGG TTTTTTTCGATCAGG TERM 37 35179 - 35127 - R 84 -8.9 -4.43309 | gap 3, opp_overlap 35141 35178, overlap 35163 35178 CAACGGTAATTAAAA GGTATGTTTTAATG-CCGCTTTTTCC GGCA GGAAAAA-CGGTCGTTAAAAC-TACC GGGCAAAACGCCCCG TERM 38 35180 - 35163 - R 80 -5.5 -4.72272 | opp_overlap 35141 35178, overlap 35127 35178 TTCCGGCAGGAAAAA CGGTCGT TAAA ACTACCG GGCAAAACGCCCCGA TERM 39 35178 - 35211 + r 100 -17.5 -4.56597 | gap 1, opp_overlap 35127 35163 35178 35188 CGGTCGTTAAAACTA CCGGGCAAAACGCCCC GAA GGGGCG-TTTGCCGGG TTTTTCACCCGGCCA TERM 40 35211 - 35178 - R 88 -17.5 -3.08032 | gap 1, opp_overlap 35178, overlap 35127 35163 35188 CGGTCGTTAAAACTA CCGGGCAAAACGCCCC GAA GGGGCG-TTTGCCGGG TTTTTCACCCGGCCA TERM 41 35202 - 35188 - R 86 -12.8 -4.10429 | opp_overlap 35178, overlap 35178 AACTACCGGGCAAAA CGCCCC GAA GGGGCG TTTGCCGGGTTTTTC Ajs_4202 35728 - 35234 - | DNA repair protein RadC TERM 42 35817 - 35805 - R 70 -10.5 -3.60792 | CGGTCAAGGGTGAAA CGGCC AGC GGCCG CAAGCGCCCTTCAGG TERM 43 36230 - 36178 - R 74 -11.8 -3.52896 | gap 2, overlap 36182 36185 GCAGCAGCGACACAA GGAAGGACGCCGGCAGGACGGCGCGC GCA GCGCGCAGGCTTGCCGGC--CCAGCC AGCAGGGCGAAGCCC TERM 44 36226 - 36182 - R 83 -14.2 -3.50332 | gap 2, overlap 36178 36185 CAGCGACACAAGGAA GGACGCCGGCAGGACGGCGCGC GCA GCGCGCAGGCTTGCCGGC--CC AGCCAGCAGGGCGAA TERM 45 36225 - 36185 - R 90 -18.1 -2.88731 | overlap 36182 36178 CGACACAAGGAAGGA CGCCGGCAGGACGGCGCGC GCA GCGCGCAGGCTTGCCGGCC CAGCCAGCAGGGCGA TERM 46 36256 - 36272 + r 84 -15.1 -3.29144 | AGCCCTGCCCTTCCA GCCCGGC GCA GCCGGGC TTGTCGCCGGCCTAC Ajs_4203 36502 - 36284 - | hypothetical protein TERM 47 36517 - 36542 + r 72 -13.9 -2.71712 | overlap 36516 TAGTAGGTGCTCCAG TTGCGGCCGCC ACCG GGCGGCCGCGC GTTTCAGAAAAGGGC Ajs_4204 36995 - 36546 - | hypothetical protein Ajs_4205 37476 - 37009 - | hypothetical protein TERM 48 37183 - 37215 + g 81 -14.7 -3.53012 | overlap 37186 GGACGGGGCACCATC GAGGGCGCGCAGCGC CTC GCGCAGCTCGCCGTC TTTCACGAAGCCGGG TERM 49 37186 - 37212 + g 71 -15 -2.60496 | overlap 37183 CGGGGCACCATCGAG GGCGCGCAGCGC CTC GCGCAGCTCGCC GTCTTTCACGAAGCC TERM 50 37337 - 37359 + g 74 -10.4 -3.84017 | overlap 37338 GCGCGGCCCTCCCGC ACTGCCGCGC GCA GCGCGGCCGC TTGTCTTTCCAGTTC TERM 51 37338 - 37358 + g 71 -13.9 -2.89687 | overlap 37337 CGCGGCCCTCCCGCA CTGCCGCGC GCA GCGCGGCCG CTTGTCTTTCCAGTT TERM 52 37490 - 37521 + r 70 -12.2 -3.21912 | gap 1, overlap 37494 ATGGCTCGTACTCCT TGAGCG-GCCCCGGC GAA GCCGGGGCGCGTGCG TTGGTGGGTTAGGCG TERM 53 37494 - 37517 + r 80 -16 -2.57721 | gap 1, overlap 37490 CTCGTACTCCTTGAG CG-GCCCCGGC GAA GCCGGGGCGCG TGCGTTGGTGGGTTA Ajs_4206 39506 - 37530 - | methyltransferase type 11 TERM 54 40537 - 40499 - R 100 -22.4 -4.11216 | CGCGCACCCGGAAAA GGGCCACGCCGGGACGGC GCA GCCGTGCCGGCCTAGCCC AGCAGGATGCCGCGC Ajs_4207 40830 - 40603 - | hypothetical protein TERM 55 40907 - 40937 + r 85 -14.6 -3.53811 | overlap 40908 GTGCGCGTCAGCGGG GTGCAGCGCCGGCC AGC GGCCGGCGCTCCGA TTTAGGCGGCCTCCA TERM 56 40908 - 40936 + r 86 -18.1 -2.72144 | overlap 40907 TGCGCGTCAGCGGGG TGCAGCGCCGGCC AGC GGCCGGCGCTCCG ATTTAGGCGGCCTCC Ajs_4208 41244 - 40939 - | hypothetical protein TERM 57 41178 - 41188 + g 72 -8.2 -4.12188 | GCTGGCCGTTCTCGG GCCC ATA GGGC TTTTGCGCGTCGTGC Ajs_4209 41621 - 41280 - | hypothetical protein TERM 58 41329 - 41366 + g 73 -9.2 -3.92373 | gap 3, overlap 41324 AATCCCGCGTCGGCC GCGTCCA-TC--GCGGCCG CCT CGGCCGCCTGACTGGCCGC TTTCTCGGTGCGCTG Ajs_4210 42515 - 41691 - | hypothetical protein TERM 59 42594 - 42561 - R 100 -15.2 -4.56597 | TTGGGGGTTGAAAAA CTGGCGCGCTCGGC CTGCTC GCCGTGTGCGCCAG GGTGAAAGATCAGCG Ajs_4211 43035 - 42604 - | single-strand binding protein TERM 60 43151 - 43135 - R 76 -8.1 -4.11394 | opp_overlap 43135 ATTGTACGCCCAAAA CTATTGA CCG TCAATAG TTTGCGAGAGAAAAA Ajs_4212 44351 - 43800 - | hypothetical protein Ajs_4213 44987 - 44370 - | phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases like enzyme Ajs_4214 45923 - 45009 - | C-5 cytosine-specific DNA methylase TERM 61 45854 - 45878 + g 72 -14.2 -3.05384 | opp_overlap 45823 45854 TCGCGGCCCACACCA CGCGCGCGCC GGCTA GGCGCGCGCC TTCGGTGAAGCCACC Ajs_4215 46149 - 45928 - | hypothetical protein TERM 62 46324 - 46306 - R 78 -10.4 -4.08394 | ATACGCGCGGCAAAA TGCTTTCA TTG TGAAAGCA CAAAGCTAGCCGGCG Ajs_4216 46860 - 46360 - | hypothetical protein Ajs_4217 47765 - 46857 - | exonuclease, RNase T and DNA polymerase III Ajs_4218 48805 - 47762 - | hypothetical protein TERM 63 48898 - 48875 - R 83 -6.6 -4.84182 | overlap 48880 GTAAAAAACAACAAA CGCAACAGGC CAGC GCCTGCCGGG ATCGAACTGGCCGGG TERM 64 49561 - 49591 + r 75 -13.8 -3.02186 | overlap 49557 GCGCGCCCGGTTGAG CGGCCGGCGCGGCC GTA GGACGCGGCGGGCG TGATTTATCCGGTGT TERM 65 49710 - 49726 + r 91 -15.1 -3.87815 | CGGTGGAGCGCCCCG GCCCGGC GCA GCCGGGC TTTGTGAGCATCCGC TERM 66 49854 - 49840 - R 74 -12.8 -3.28712 | GGGTGGGTTCGAGAA GGGGGG GCA CCCCCC TTCGGCGGCGTTAAA TERM 67 49896 - 49885 - R 100 -5.8 -5.46706 | overlap 49886 49887 ACGTTAAAAGAAAAA GCGT TAAG ACGC GCGCGCGTGTTAAGC Ajs_4219 51294 - 50359 - | hypothetical protein TERM 68 51448 - 51477 + r 85 -15.8 -3.53733 | overlap 51452 GTTGATGATGGTCTC GAAGTGCCCGGC CTGCTC GCCGGGCATTTC TCTTTATGCGCTACC TERM 69 51452 - 51473 + r 100 -13 -4.40003 | overlap 51448 ATGATGGTCTCGAAG TGCCCGGC CTGCTC GCCGGGCA TTTCTCTTTATGCGC Ajs_4220 51808 - 51494 - | putative transcriptional regulator Ajs_4221 52128 - 51805 - | hypothetical protein TERM 70 51907 - 51945 + g 71 -12.3 -3.21912 | opp_overlap 51891 51903 51900, overlap 51908 CAGCAGAACCACTAC CGCGCCGGCCATCGCGT AATAG ACGCGGTAGCCGGGGCC TTGGTCGATTCGCAG TERM 71 51908 - 51944 + g 73 -15.8 -2.52933 | opp_overlap 51891 51903 51900, overlap 51907 AGCAGAACCACTACC GCGCCGGCCATCGCGT AATAG ACGCGGTAGCCGGGGC CTTGGTCGATTCGCA TERM 72 52179 - 52157 - R 100 -15.6 -4.17701 | opp_overlap 52150 TCTATAAACGACAAA GGCGCAAGGT AGC ACCCTGCGCC TCGTCCTGGTTGATG Ajs_4222 52600 - 52202 - | hypothetical protein TERM 73 52651 - 52631 - R 89 -12.5 -4.24002 | overlap 52633 CGCGAAAGTTGAAAA GAGGCGGCC AGC GGCCGCCTT CAGGGGAGGGTTAGA TERM 74 52649 - 52633 - R 90 -15.1 -3.71804 | overlap 52631 CGAAAGTTGAAAAGA GGCGGCC AGC GGCCGCC TTCAGGGGAGGGTTA Ajs_4223 53954 - 52662 - | parB-like partition proteins Ajs_4224 54749 - 53967 - | cobyrinic acid a,c-diamide synthase Ajs_4225 55197 - 54778 - | hypothetical protein TERM 75 55133 - 55116 - G 72 -5.5 -4.3739 | gap 1 GAGGGGCGCAGAAAA CCGCACCA GCA CGG-GCGG ATTGCAGGCTGGGGA TERM 76 55369 - 55353 - R 84 -8.1 -4.47328 | opp_overlap 55356 55357 55360, overlap 55357 AATTCTACCATAAAA CTATTGA CCG TCAATAG TTGAAGGCATGTTTT TERM 77 55601 - 55575 - R 71 -9.4 -3.71848 | overlap 55572 GTTGGCCAGGAAGAA GCCTTCGAGGGT CGA AGCCTCCAAGGC CAAGTCGTTGAAGGC TERM 78 55822 - 55844 + r 71 -13.4 -2.57344 | overlap 55821 TGCTGGCCCGTGGTA GCCGTGCCCA GCG TGGCCACGGC GTTCTGCACGCCATG Ajs_4227 56606 - 56343 - | hypothetical protein TERM 79 58980 - 58968 - g 86 -9.1 -4.63932 | opp_overlap 58968 CATCCGCCAAGAAAA GCTGG AGA CCAGC CAGCTTGCTGTGGAT TERM 80 59303 - 59316 + G 70 -2.3 -4.67353 | overlap 59304 59314 TGCAATTGGGGCGGT TGCTG CGTA CGGCG TTTTTGGCTGACTAC Ajs_4228 56797 - 59712 + | transposase Tn3 family protein TERM 81 59856 - 59844 - g 72 -6.9 -4.1899 | overlap 59852 TTATTGCACTGAAAA CGAGG AGA CCCCG TGGTGGGGTGCGGCC Ajs_4229 59806 - 60255 + | hypothetical protein TERM 82 60294 - 60279 - T 74 -5.4 -4.56597 | gap 1 CGCGGCGGGCAAAAA CCGCCTC CAG GAG-CGG ATACAAAGGGTTTGT Ajs_4230 61157 - 60495 - | metal dependent phosphohydrolase Ajs_4231 61681 - 61154 - | aspartyl protease-like protein Ajs_4232 62418 - 61678 - | hypothetical protein Ajs_4233 63089 - 62466 - | NERD domain-containing protein Ajs_4234 63808 - 63107 - | hypothetical protein Ajs_4235 64861 - 63818 - | OmpA/MotB domain-containing protein Ajs_4236 65140 - 64865 - | histone family protein DNA-binding protein Ajs_4237 65820 - 65296 - | hypothetical protein Ajs_4238 67028 - 65817 - | hypothetical protein Ajs_4239 68726 - 67044 - | zeta toxin family protein Ajs_4240 69004 - 68744 - | hypothetical protein Ajs_4241 69479 - 69018 - | hypothetical protein Ajs_4242 70600 - 69512 - | filamentation induced by cAMP protein Fic TERM 83 70069 - 70036 - G 73 -6 -4.37886 | gap 2, opp_overlap 70036 70057, overlap 70037 70038 TGATTTCGTAGAAAA CCTCGCGCGCTGGC TCCAGGTT GCC-GCGCGCG-GA CTCCTTGGCGGCCTC TERM 84 70456 - 70466 + g 72 -8.2 -4.08216 | CCAAGTCGTATTCGC CCCG TAC CGGG TTTTCGCGCAGCTCC Ajs_4243 70824 - 70597 - | hypothetical protein Ajs_4244 71100 - 70837 - | hypothetical protein TERM 85 71118 - 71140 + r 76 -10 -3.86015 | overlap 71119 TTCAGATGCCGTTTA TTTGCTTTCA CGG TGAAAGCAAG TTTATCAAAAAAATC TERM 86 71195 - 71154 - R 100 -6 -5.52986 | gap 1 AGTTTATCAAAAAAA TCCTACTGACACTA-GGCG TTTAG CGCGATAACGTCAATAGGA AGGGGAGGGCGATCA Ajs_4245 71576 - 71328 - | hypothetical protein Ajs_4246 72124 - 71600 - | hypothetical protein Ajs_4247 72534 - 72121 - | hypothetical protein SEQUENCE gi|121582553|ref|NC_008766.1| Acidovorax sp. JS42 plasmid pAOVO02, complete sequence (length 63609) TERM 1 499 - 449 - g 77 -13.4 -3.57144 | gap 4, opp_overlap 451, overlap 450 CGCTGCATTGCGAAA CCCTCGCGCCCGGCCAGCACGTGGGC CAG GCCCACGTGC-G-C-GAGCGCG-GCG AGCAGTCATTCATGG TERM 2 3957 - 3921 - g 75 -12.9 -3.44527 | overlap 3951 3952 GAGCGACCAGGAGAA GGCCAAGCTCCAGGCCG AGG CGGCCGAGAAGCTGGCC CAGCGTGCGGCCGAG Ajs_4248 4 - 4746 + | hypothetical protein TERM 3 4794 - 4748 - T 70 -10 -3.55761 | CACGCATCGGCTAAA GTCCGGGAAGGCTGCAACCACA CAG CGCGGTTTCCTCCCTCCCTGAC CGCCGGCAGTCATCG TERM 4 4809 - 4831 + T 100 -16.3 -5.86061 | CCGCCGGCAGTCATC GCCGCCTCG CACCC CGAGGCGGC TTTTTTTTGCTCGAG Ajs_4249 5619 - 5044 - | resolvase domain-containing protein Ajs_4250 6051 - 5746 - | addiction module antitoxin Ajs_4251 6137 - 6355 + | hypothetical protein TERM 5 7049 - 7015 - g 81 -3.5 -5.00616 | overlap 7017 GGCGGCTCCAAAAAA CATG-GCGGGCCTGACC TTG GGCC-GACCCGCGCAAA ACGTGCCTGGGCCGC TERM 6 7047 - 7017 - g 72 -8.3 -4.13561 | overlap 7015 CGGCTCCAAAAAACA TG-GCGGGCCTGACC TTG GGCC-GACCCGCGCA AAACGTGCCTGGGCC Ajs_4252 6352 - 7308 + | DNA-cytosine methyltransferase TERM 7 7844 - 7832 - g 86 -6.2 -5.06414 | opp_overlap 7834, overlap 7833 7834 CCTGCGCAAGAAAAA CGGC GGCCT GCCG CTGCTGCACGCCAGC Ajs_4253 7308 - 8171 + | type II DNA restriction endonuclease R.NGOI TERM 8 8248 - 8216 - f 81 -13.4 -3.59979 | gap 1 CCTGCTGACGTGAAA GCCG-AAGCTGCCGC CGTC GCGGCAGCGCACGGC ATGAGCCTGGCCGCC Ajs_4254 8338 - 8544 + | hypothetical protein TERM 9 8555 - 8600 + T 100 -20.5 -3.4285 | opp_overlap 8568, overlap 8562 8568 CCTGACGATGCAGGC CCGGACGTGAAAAGGGCGGCC AACT GGCCGCCCTTTTCATTACTGG TTGTGCCTTACCTGG TERM 10 8562 - 8593 + T 100 -23.2 -3.30741 | opp_overlap 8568, overlap 8555 8568 ATGCAGGCCCGGACG TGAAAAGGGCGGCC AACT GGCCGCCCTTTTCA TTACTGGTTGTGCCT TERM 11 8568 - 8587 + T 100 -16.4 -4.47217 | opp_overlap 8568, overlap 8562 8555 GCCCGGACGTGAAAA GGGCGGCC AACT GGCCGCCC TTTTCATTACTGGTT TERM 12 8587 - 8568 - T 100 -16.4 -4.13767 | opp_overlap 8568 8562 8555 GCCCGGACGTGAAAA GGGCGGCC AACT GGCCGCCC TTTTCATTACTGGTT Ajs_4255 8841 - 8608 - | hypothetical protein Ajs_4257 9540 - 9010 - | hypothetical protein TERM 13 9412 - 9427 + g 75 -3.2 -4.74103 | overlap 9411 ACAGGCTGCGATGCC GTGTCG CTCA CGATGC TTTTTAACTTGAGCA Ajs_4258 10293 - 9619 - | phage DNA methylase Ajs_4259 10880 - 10449 - | hypothetical protein Ajs_4260 11594 - 10896 - | TraX family protein Ajs_4261 11860 - 11594 - | hypothetical protein TERM 14 11910 - 11875 - R 73 -11.1 -3.55444 | gap 1, overlap 11876 TGTTTAGCCGCTAAA TCG-GAAGGGCCGGCC TACTC GGCCGACCCCTCGCGT GAAGTGTTGAAAGAC TERM 15 11909 - 11876 - R 75 -14.6 -2.73124 | gap 1, overlap 11875 GTTTAGCCGCTAAAT CG-GAAGGGCCGGCC TACTC GGCCGACCCCTCGCG TGAAGTGTTGAAAGA Ajs_4262 12524 - 11889 - | lytic transglycosylase, catalytic Ajs_4263 13122 - 12538 - | TrbM family protein Ajs_4264 14872 - 13139 - | TrbL/VirB6 plasmid conjugal transfer protein TERM 16 13585 - 13631 + g 89 -17.9 -3.29461 | gap 1, overlap 13586 13621 13622 CCTTGTCCGCACCGT TGCCGGTGCTGGCGGTC-GAGC CGCT GCCCTGGCCGCCGGCGCCGGCC TTGTCGCCGCCCTTC TERM 17 13586 - 13630 + g 100 -21.4 -2.57463 | gap 1, overlap 13585 13621 13622 CTTGTCCGCACCGTT GCCGGTGCTGGCGGTC-GAGC CGCT GCCCTGGCCGCCGGCGCCGGC CTTGTCGCCGCCCTT Ajs_4265 15110 - 14883 - | entry exclusion protein TrbK TERM 18 15078 - 15060 - G 72 -13.1 -3.14564 | GCAGCCGGCGACCAA GGCCGCC ACGAG GGCGGCC GAGGCCAAGGACAGA Ajs_4266 15884 - 15120 - | TrbJ protein of DNA transfer system Ajs_4267 17320 - 15902 - | conjugation TrbI family protein TERM 19 16740 - 16767 + g 73 -11.3 -3.73402 | TGCGCGTCGATTTGC TGCTGCACCGC TGCGAT GCGGTTCAGCA TTTCATCGCGCGTCT Ajs_4268 17813 - 17325 - | conjugal transfer TrbH family protein TERM 20 17352 - 17367 + g 72 -8.2 -4.08216 | CACCCAGTACCCGGC CGGCGC GAAC GTGCCG TTTTGCGCCAGGTAC Ajs_4269 18715 - 17816 - | conjugal transfer protein TrbG/VirB9/CagX Ajs_4270 19515 - 18733 - | conjugal transfer protein TERM 21 19421 - 19474 + g 77 -12.3 -3.63515 | gap 1, overlap 19398 19395 GAGCGGCGACCGCCG GCGAGC-GGTTCCTTCGAGCGGCGCG GAT CGCGCGGCTCGGAGGGGTTGGCGGGC TTCTTGAAGATCAAG Ajs_4271 22070 - 19512 - | type IV secretion/conjugal transfer ATPase TERM 22 19858 - 19823 - G 80 -9.7 -4.25104 | CGTTGGGCAGGAAAA TCTTGGTCGCGGTCG ATTCCA CGATCACGTCCAAGA TGCCCGAGTTGGCCG TERM 23 21776 - 21795 + g 76 -15 -3.14132 | CCATCCAGCCGTTCC CCAGGCCC GCCA GGGCCTGG TTGATGCGGAACGAC Ajs_4272 22378 - 22067 - | conjugal transfer TrbD family protein Ajs_4273 22846 - 22382 - | conjugal transfer protein TrbC Ajs_4274 23824 - 22859 - | type II secretion system protein E TERM 24 23516 - 23489 - G 70 -11.2 -3.59979 | CTTGCGGATCGCAAA GGTCGGGCCGGT GACG ACCGGGCCGAGC TGGCCCGCGAAGCGC Ajs_4275 24497 - 24135 - | helix-turn-helix domain-containing protein TERM 25 24687 - 24674 - g 70 -5.9 -4.2349 | opp_overlap 24674 TCGCCATAGCGAAAA CAGCG TCCG CGCCG TTTTCGACCTGGCCG Ajs_4276 24606 - 24944 + | single-strand binding protein TERM 26 24972 - 24949 - f 79 -9.4 -4.13654 | opp_overlap 24951, overlap 24950 GCGGCAAATGAGAAA CGCGCCCGGC CAAG GCCGGGCGTT ATGCTAGGAGGACGA TERM 27 24971 - 24950 - f 71 -12.9 -3.0771 | opp_overlap 24951, overlap 24949 CGGCAAATGAGAAAC GCGCCCGGC CAAG GCCGGGCGT TATGCTAGGAGGACG TERM 28 24951 - 24970 + F 89 -16.4 -3.40403 | opp_overlap 24950 24949 GGCAAATGAGAAACG CGCCCGGC CAAG GCCGGGCG TTATGCTAGGAGGAC TERM 29 25116 - 25140 + G 81 -16.4 -3.18728 | overlap 25098 25110 CGCAGGCCGGCACCG CTGGCGGGGC TTTCC GCCCCGCCGG TTCCCTCTTCGAGCT TERM 30 25379 - 25362 - g 84 -6.9 -4.71426 | overlap 25363 25372 TGGCGACCAAGAAAA CGACCGA GAAG CCGGCCG GTGCCACCGGCGAGC Ajs_4277 24992 - 26215 + | TrfA family protein TERM 31 26237 - 26257 + T 100 -10.4 -5.60993 | gap 1, opp_overlap 26218 26217 CCCTGCCCCCGGAGA GCCGCC-CG AGAT CGAGGCGGC TTTTTTTCTCGAGCA Ajs_4278 26614 - 26399 - | hypothetical protein Ajs_4279 26769 - 29168 + | transposase Tn3 family protein TERM 32 30433 - 30445 + T 71 -4.7 -4.44667 | opp_overlap 30425 30423 30422 30420 AAGAGCAGCGCCGCC GGCGC CGA GCACC TTTCTTCTTGAGACC Ajs_4281 30847 - 30539 - | hypothetical protein TERM 33 33373 - 33415 + G 74 -12.4 -3.59979 | AGCGGCGCACGACCG CGCCGGGCTGGAGCGGCTGC TGC GCTACTGCGCCCGCCCGCCG TTTGCCATGGAGCGG Ajs_4283 32516 - 34096 + | putative transposase TERM 34 34974 - 34999 + G 75 -11.8 -3.72893 | CCCTGGACGCGGTGG CGCGGCTGGC GCGGGA GCTGGCCGCG TTTGGTCAGCGGCTG Ajs_4284 34349 - 35143 + | hydratase/decarboxylase Ajs_4285 35214 - 35570 + | hypothetical protein TERM 35 35679 - 35725 + F 79 -9.4 -4.1899 | gap 1, opp_overlap 35679 CCAGCGCTGTACCAA CGAGGCGACCCGGTGCACTCC CGCCAT GGAGA-CATGGGGTCTCCTCG TTTTCAGTGCAATAA TERM 36 38042 - 38030 - g 86 -9.1 -4.63932 | opp_overlap 38030 CATCCGCCAAGAAAA GCTGG AGA CCAGC CAGCTTGCTGTGGAT TERM 37 38365 - 38378 + G 70 -2.3 -4.67353 | overlap 38366 38376 TGCAATTGGGGCGGT TGCTG CGTA CGGCG TTTTTGGCTGACTAC Ajs_4288 35859 - 38774 + | transposase Tn3 family protein TERM 38 39164 - 39134 - f 76 -12.7 -3.53224 | gap 1, opp_overlap 39141, overlap 39141 GATGGCTCCCTGAAA CAACAAA-CGGCCC TTCG GGGCCGTTTTGCTG CGTAGCCTGGCTGAG TERM 39 39141 - 39156 + F 91 -11.8 -4.2828 | opp_overlap 39141 39134 CCCTGAAACAACAAA CGGCCC TTCG GGGCCG TTTTGCTGCGTAGCC TERM 40 39156 - 39141 - f 100 -11.8 -4.56978 | opp_overlap 39141, overlap 39134 CCCTGAAACAACAAA CGGCCC TTCG GGGCCG TTTTGCTGCGTAGCC Ajs_4290 39194 - 40810 + | putative transposase TERM 41 41137 - 41094 - T 70 -7.3 -4.07568 | gap 1, opp_overlap 41115 GGCCGTCGCCGAAAA GTTCGCCGACGTGCAGCGGC GCGCG GCCGCC-CACGGCCGCAAGC TGCGGCTCGGGGTGC TERM 42 41793 - 41773 - T 81 -14 -3.61178 | CGCAGGGATGCGAAA GGGCACCG GCTTG CGGTGCCC GAGAAAGTTAGTGAC Ajs_4292 42511 - 41801 - | short-chain dehydrogenase/reductase SDR TERM 43 42683 - 42658 - H 82 -14.7 -3.38272 | CAGCACTATTGATAA GGGGCCGACTC CTGC GAGCCAGCCCC CATTCACATCACGCC TERM 44 43662 - 43678 + G 70 -10.8 -3.54459 | overlap 43654 GCTTCGAGGCCCTGG CGGGCC TTCCT GGCCCG TTTCCGGGGCCTTCC TERM 45 43759 - 43740 - g 70 -10.6 -3.49102 | ACAGTTCCGAGACAA GTCGGCCG GCTC CGGCCGGC GCAGCCCTGACGTTG Ajs_4294 43481 - 43969 + | hypothetical protein TERM 46 44046 - 44062 + T 81 -7.2 -4.42238 | CCATTGACACTTGAG GGGCGG CCCCT TCGCCC TTTTCCTTGGCGTGA TERM 47 44227 - 44241 + T 74 -12.8 -3.35679 | TGACCGGCCGCCGAA GGGGGG TGC CCCCCC TTCTCGATCCCACCC TERM 48 44375 - 44356 - T 75 -15 -2.78384 | opp_overlap 44371 CTGCGGCTTAGGAGA GCCAGGCG CAAG CGCCTGGC GAAAGGCAGTAAGTT TERM 49 44432 - 44388 - T 73 -13 -3.25088 | gap 2, overlap 44380 GGCGAAAGGCAGTAA GTTCGAGAGCTTGCGAGGGGGC AAA GCCCCCTCACA--CTCCCCAAC TAGGCCGCGCCAGTT Ajs_4296 44877 - 44596 - | addiction module antitoxin TERM 50 44790 - 44820 + g 70 -11 -3.60475 | CCAGGACGGGCACCA GGTCGGCATCGAGC GTT GCCCGGTGCTGCCC TTTCGCCTCGCGCTT Ajs_4297 45127 - 44864 - | addiction module antitoxin Ajs_4298 45298 - 45729 + | antirestriction protein Ajs_4299 45774 - 45992 + | hypothetical protein TERM 51 46263 - 46216 - g 73 -12.6 -3.36749 | gap 1, opp_overlap 46253, overlap 46195 46217 CATCTGGAAGATGAA CGGCGGAACGCA-CGTGGGCAGC ATG GCCGACCACGACGCGCCCGGCCA GGTCATCGAGCGCCA TERM 52 46765 - 46750 - g 70 -11.8 -3.39449 | GGCGACCAAGATCAA GGCGGC CAGG GCCGCC GGGTTGAACGCCAAG Ajs_4300 46004 - 47206 + | hypothetical protein Ajs_4301 47223 - 47480 + | hypothetical protein Ajs_4302 47637 - 47873 + | hypothetical protein TERM 53 47996 - 47975 - f 89 -17.3 -3.15544 | overlap 47950 CCCCAGGTGGAGGAA CGCCCCGGA GTGA TCCGGGGCG CTTGGCCTGGTGCTG Ajs_4303 48082 - 48408 + | hypothetical protein Ajs_4304 48411 - 48740 + | hypothetical protein TERM 54 48788 - 48803 + F 83 -7.5 -4.63218 | CTTCTGCACATGGTC GGCGG CTGGCA CCGCC TTTTGTTCAACAACC TERM 55 49850 - 49840 - g 74 -2.4 -4.78753 | opp_overlap 49846, overlap 49841 GGAAGATCAAGAAAA CCGC CGC GCGC AAGGCCACGCAGGAA Ajs_4305 48834 - 49916 + | cobyrinic acid a,c-diamide synthase TERM 56 49994 - 49948 - g 70 -9.8 -3.73534 | CAACGCCACGAAGAA GGCCCCGCAAGCGGCCGTAGAG AAG CCCAAGGGCGGCGGGCTGGGCC TGGATGGCCTCGGCG TERM 57 50048 - 50078 + G 72 -14.6 -2.74488 | CCACAGGCCGCGAAT GCGGCCCCTGGCGG CGG CCCCCAGGAGCTGC TGCTTGACCTGATTG Ajs_4306 49913 - 50980 + | ParB family protein TERM 58 51022 - 51041 + F 100 -12.1 -5.47821 | CCCCCACACCCCTGC GCCCCGC CATCGA GCGGGGC TTTTTTTGCCTGCGT TERM 59 51801 - 51749 - g 91 -15.4 -3.96892 | gap 1 AAGGCCCAGGAGAAA GCGGCGGCCAGCGCCGACCAGGTGG AGGC CCTGCGGGCCGA-GCTGGCGGCCGC GAACAGCAAGGCAAC Ajs_4307 51182 - 52189 + | hypothetical protein TERM 60 52251 - 52275 + F 100 -15 -5.4505 | opp_overlap 52248 CGGCCCCAAGGACGA GCCGGCCTCG CGTGC CGAGGTCGGC TTTTTTATTGCCGGA Ajs_4308 52360 - 52707 + | putative conjugation protein TraO TERM 61 52846 - 52828 - g 70 -11.6 -3.45023 | GCACGACCAGCAGAA CCGACGCC ACC GGCGACGG CCTGCTGGCTGCTGC TERM 62 53259 - 53222 - g 75 -14.2 -3.28924 | gap 1 GATGCGCGCCGAGAA CCCCGAGC-TGGCATCC GATTG GGATGCCATGCGCGAGG CGGCACGCCGGCACC Ajs_4309 52737 - 53375 + | hypothetical protein TERM 63 53383 - 53400 + T 90 -14.1 -4.06687 | opp_overlap 53383 CCGTCTAAAGCGAAA GCCCGGC AACT GCCGGGC TTCTTTCTCGAGCCT TERM 64 53400 - 53383 - T 86 -14.1 -3.84451 | opp_overlap 53383 CCGTCTAAAGCGAAA GCCCGGC AACT GCCGGGC TTCTTTCTCGAGCCT Ajs_4310 54011 - 53571 - | TraM protein TERM 65 53619 - 53609 - G 72 -8.2 -4.07687 | opp_overlap 53618 AGGCCGCCGCGAAAA CGGC CAT GCCG GCGGCGACGATGTTC Ajs_4311 54736 - 54011 - | transfer origin protein, TraL Ajs_4312 55155 - 54736 - | TraK protein of DNA transfer system TERM 66 55053 - 55093 + g 79 -13.2 -3.62775 | gap 1, opp_overlap 55066, overlap 55052 CCTTCACATCCCCAC GCACCGCCAGGAACGCGAC TGCG GCCGCGT-CCTGTCGGCGC TTCTTGGCCGCTCGT TERM 67 55382 - 55434 + H 81 -13.6 -3.62597 | gap 1, opp_overlap 55388 55403, overlap 55383 55403 CGCCGTAAGGCGGGC AGGATAGGCGAAGTTAGCTAACCGG CGAG CCGGTTATCTATCTTCG-CTGTCCC TTATTCGCGCCTGCG TERM 68 55383 - 55433 + H 84 -17.1 -2.77344 | gap 1, opp_overlap 55388 55403, overlap 55382 55403 GCCGTAAGGCGGGCA GGATAGGCGAAGTTAGCTAACCGG CGAG CCGGTTATCTATCTTCG-CTGTCC CTTATTCGCGCCTGC TERM 69 55429 - 55388 - H 75 -14.5 -2.78715 | opp_overlap 55383 55382 55403, overlap 55403 AAGGCGGGCAGGATA GGCGAAGTTAGCTAACCGG CGAG CCGGTTATCTATCTTCGCT GTCCCTTATTCGCGC Ajs_4313 55518 - 55739 + | hypothetical protein Ajs_4314 55744 - 56115 + | TraJ protein of DNA transfer system TERM 70 56551 - 56579 + G 86 -16.1 -3.53444 | opp_overlap 56538 56541 CACGATGCACGAGCC GTTCGGCCAGC ACCGGAC GCTGGCCGAAC TTTGCACGGCCCTGG TERM 71 58252 - 58268 + G 72 -13.7 -3.01712 | opp_overlap 58248 CGTCCGCAACATCGA GGGCCAG GCG CTGGCCC TGTTGAAACGAGGCG Ajs_4315 56150 - 58408 + | relaxase/mobilization nuclease family protein Ajs_4316 58405 - 58680 + | putative entry/exclusion protein TrbK TERM 72 58770 - 58799 + G 73 -10.8 -3.65046 | CTCGGCGGGGTATCC CTG-GTCGGCGGCC TCCA GGCCGC-GACACAG TTCTTCGCCTACACG TERM 73 59097 - 59054 - g 79 -11.7 -3.78934 | gap 1 CTGGGCCGAGAAGAA GGACATTCAGGCCGC-CGGC CTGCT GCCGCGCGAGCGGAACGTCC TGGAGATCGTCACCG TERM 74 60446 - 60417 - g 78 -15.7 -3.20382 | GGCGAGATCGAGGAA GCCGGCGACATGG TGAT CTACGTCGCCGGC TACCCGGCCATCTAC Ajs_4317 58677 - 60581 + | TRAG family protein Ajs_4318 60578 - 61114 + | TraF peptidase TERM 75 61420 - 61395 - g 91 -16.9 -3.66018 | GGACGATGCCAAGAA GCAGCTCGCCG TGAT CGGCAAGCTGC TGAAAGAGGCCAAGG TERM 76 62741 - 62694 - g 74 -10 -3.84406 | opp_overlap 62692 62691 CCCGGAGCACAAGAA GATGCTGCGCGAAGGC-GACG-GC ATCG GCACGTCCGCCA-CGCGC-GCATC CATCATTTCCGAGCT TERM 77 63179 - 63165 - g 71 -12.8 -3.29471 | GCCCGACTACAGCAA GGGCCG CAA CGGCCC CGCTGCCGAGTAACC Ajs_4319 61129 - 63192 + | DNA topoisomerase III Ajs_4320 63217 - 63609 + | conjugal transfer protein SEQUENCE gi|121592436|ref|NC_008782.1| Acidovorax sp. JS42, complete genome (length 4448856) Ajs_0001 212 - 694 + | NLP/P60 protein TERM 1 705 - 731 + F 70 -12.2 -3.23899 | CCTGAACTTCCACGG CGCCGCTTGCGG CGG CCACAGGCGGTG TTACCTTCCTTCACC TERM 2 1470 - 1424 - g 70 -10.7 -3.61398 | gap 1 CGTGGGCTTCAAGAA CGGCACGGATGGCGGCGTGAAG GTGG CGGC-CGACGCCATCCAGGCCG CGCAGGCACCGCATG Ajs_0002 822 - 1922 + | phospho-2-dehydro-3-deoxyheptonate aldolase TERM 3 2444 - 2402 - g 73 -14.1 -3.13403 | gap 1, overlap 2400 GGTTCGTCAGCAACA CGCTGCAGATCTTCG-CCGC GCGC GCGGCCGCCGAACTGCAGCG CCAGACGGACGACCA TERM 4 3807 - 3825 + G 74 -8 -4.18018 | CACCATGGCGGCGCT GCGCGCGC TGG GCGTGGGC TTTTCGCTGGACGAC Ajs_0003 2149 - 4158 + | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) Ajs_0004 5019 - 4216 - | regulatory proteins, IclR TERM 5 5092 - 5106 + H 73 -2.8 -4.72272 | CCGACTCATGGATTT CCCT AGCGAGA AGGG TTTTTCATCAGGGGG Ajs_0005 5262 - 6233 + | hypothetical protein TERM 6 6288 - 6252 - T 100 -10.8 -4.72272 | overlap 6254 GGCTTGCAGGAAAAA TGGCTGCTGGCGCTTG ATGGG CAAGCGCTGGCAGCTA TCAATAATGAAGCAC TERM 7 6286 - 6254 - T 71 -13.4 -2.65504 | overlap 6252 CTTGCAGGAAAAATG GCTGCTGGCGCTTG ATGGG CAAGCGCTGGCAGC TATCAATAATGAAGC TERM 8 6399 - 6411 + T 74 -2.6 -4.87665 | opp_overlap 6407 AGCCCGCGCCATTTT GTGG ACAAG CCGC TTTTTCTGAATGGCG Ajs_0006 7177 - 6572 - | hypothetical protein Ajs_0007 7947 - 7318 - | hypothetical protein TERM 9 8183 - 8147 - H 78 -6.5 -4.65895 | opp_overlap 8147, overlap 8148 8149 CGTTTTATGCAAAAA GTGCCTCCAGCGCTTAT CCA ATAAGCGCTGACAGCTA TCAAATCAGGACCAT TERM 10 8181 - 8149 - H 71 -13.5 -2.63208 | opp_overlap 8147, overlap 8148 8147 TTTTATGCAAAAAGT GCCTCCAGCGCTTAT CCA ATAAGCGCTGACAGC TATCAAATCAGGACC TERM 11 8424 - 8376 - g 70 -6.3 -4.2828 | CGCCACGCAGGAAAA GTCCAGCGGCTGGGTGCCCCCGC GCG GCGAGGCCCACGGGCTGCTGGCC GAGAGCGTGGGCGGC TERM 12 8765 - 8817 + G 72 -7.3 -4.18018 | opp_overlap 8765 8799 TGGACACGCAGACCA GCCCCCAGGCGGCGATGGCGCTGTG GCT CAAGGAGCAGGAGCCGCCGGCGGGC TTTTCCATCGACCGC rdgC 8260 - 9237 + | recombination associated protein TERM 13 9275 - 9248 - T 100 -14.8 -5.86061 | opp_overlap 9273 TCTGACGAAAAAAAA GCCCACGCGCCG TTGC CGGTGCATGGGC TTGGGGCCTGGCTTG Ajs_0009 10658 - 9306 - | sodium:dicarboxylate symporter TERM 14 10640 - 10616 - G 73 -13.5 -3.26449 | overlap 10611 GGCGATAGAACGGAA GCCGCACCGAC GGG GCGGGTGCGGC AGAGGAAATGGCATG TERM 15 10713 - 10689 - H 71 -5.5 -4.35085 | opp_overlap 10709 AGGTCGAAAAAAAGA CGCGCCAGGGC CGT GCAATGCCGCG CATCTTTGGAAGTCC Ajs_0010 10828 - 13482 + | multi-sensor hybrid histidine kinase Ajs_0011 14197 - 13553 - | two component LuxR family transcriptional regulator TERM 16 13613 - 13628 + g 71 -3.2 -4.59773 | overlap 13604 CGCGGCCTGGGTGCG GCTGTA GCAC TCCAGC TTTTTCAGGATGGCC Ajs_0012 14252 - 15505 + | nucleoside recognition domain-containing protein TERM 17 15548 - 15533 - f 95 -10.4 -4.56597 | opp_overlap 15533 CTCTTTCCCCAAAAA GCGCCT TGTC AGGCGC TTTTTTTACGTCGAA TERM 18 15533 - 15548 + F 100 -10.4 -5.47218 | opp_overlap 15533 CTCTTTCCCCAAAAA GCGCCT TGTC AGGCGC TTTTTTTACGTCGAA TERM 19 15671 - 15690 + F 85 -3.4 -5.27335 | opp_overlap 15664, overlap 15672 GTAGTAGAGGGCGGA CCGGCCTG TGGG CAAGCCGA TTTTTGTTTGACAGA TERM 20 15916 - 15879 - f 73 -3.3 -4.7254 | gap 1, opp_overlap 15880, overlap 15880 ACTGCCGAGCAAAAA CGGCGCAAGCGAAGGCTG ACA CAGCGTTAGCT-GCTCCT TTTTCAGGAGCTCTG TERM 21 15880 - 15915 + F 78 -6.8 -4.57837 | gap 1, opp_overlap 15879 15880 CTGCCGAGCAAAAAC GGCGCAAGCGAAGGCTG ACA CAGCGTTAGCT-GCTCC TTTTTCAGGAGCTCT Ajs_0013 15982 - 16272 + | hypothetical protein TERM 22 16312 - 16290 - T 100 -16.3 -5.60993 | CGCGGCATAAAAAAA GCCACCCGG TCCCG CCGGGTGGC TGGTGGGTGGGCACC Ajs_0014 17650 - 16463 - | beta-ketothiolase Ajs_0015 18198 - 17647 - | hypothetical protein TERM 23 18222 - 18240 + r 76 -10.2 -3.85698 | CCGCTCAGCGGGCTA GGCGGTGC AGC GCGCTGCC TTTGTGCAGGGCGAC Ajs_0016 18426 - 18211 - | hypothetical protein TERM 24 18565 - 18543 - R 76 -9.8 -3.96298 | opp_overlap 18545 CAGCTATGAATTAAA TAGCGACGTC GGC GGCGCCGCTA TTCGGGATGCCGGCC Ajs_0017 19041 - 18538 - | MerR family transcriptional regulator Ajs_0018 19235 - 19038 - | heavy metal transport/detoxification protein Ajs_0019 19413 - 21761 + | heavy metal translocating P-type ATPase TERM 25 21889 - 21852 - f 71 -13.4 -2.52464 | CTTCTTCGTAAGTCA CGCGCAAGCCATCGCC TGACAG GGTGACGGATTGCGCG ACGCACATCATGGGA Ajs_0020 21945 - 23597 + | methyl-accepting chemotaxis sensory transducer TERM 26 23611 - 23637 + T 82 -10.7 -4.07687 | GAGCGCTGCATGACG CACGCGGCGGC CGGGC GCCGCCGCCAG TTTTCAACAAACCCT TERM 27 23658 - 23673 + T 100 -10.4 -5.77853 | AACAAACCCTCCTTG CGCACC TTCG GGTGCG TTTTTTTTGCCCCTT Ajs_0021 24527 - 23784 - | hypothetical protein TERM 28 24543 - 24564 + r 100 -10.1 -5.13722 | GTCTCCCTGCTGCCC GCGGGTCCA TGGG TGTACCCGC TTTTGTTTTGATAGC TERM 29 24576 - 24611 + r 85 -3.3 -5.38047 | gap 1, overlap 24577 24578 CCGCTTTTGTTTTGA TAGCTGCCAGCGCT TTCCCCATC AGCGCTGG-AGCGG TTTTTTATATCCATC TERM 30 24660 - 24633 - R 100 -21.4 -3.19091 | opp_overlap 24636 ATATCCATCCATGAA GCATCACGCCCG GCGC CGGGCGTGATGC TTGGCGGGCCGCCTG TERM 31 24636 - 24657 + r 78 -15.9 -2.70932 | opp_overlap 24633 TCCATCCATGAAGCA TCACGCCCG GCGC CGGGCGTGA TGCTTGGCGGGCCGC Ajs_0022 25802 - 24678 - | NADH:flavin oxidoreductase/NADH oxidase TERM 32 24858 - 24813 - G 71 -12.5 -3.25823 | gap 1, opp_overlap 24836, overlap 24814 24825 GGGGTTGGAGATGAA CGCGC-GGCCAAAGGCCACG ATGTCGG CGCGGCCGCTGGCCAGCGCC TCCTGGGCCATGTCG TERM 33 24857 - 24814 - G 74 -16 -2.55351 | gap 1, opp_overlap 24836, overlap 24813 24825 GGGTTGGAGATGAAC GCGC-GGCCAAAGGCCACG ATGTCGG CGCGGCCGCTGGCCAGCGC CTCCTGGGCCATGTC TERM 34 26057 - 26030 - R 95 -19.8 -3.35679 | opp_overlap 26019 CGCCGGCACGCACAA GCCGCGCCCCGC AGAT GCCGGGCGCGGC CATATGGGCCTTACT Ajs_0023 26676 - 26068 - | glutathione S-transferase domain-containing protein Ajs_0024 27145 - 26810 - | hypothetical protein TERM 35 27093 - 27129 + g 77 -2.9 -4.96646 | overlap 27094 27095 GCGCTATTTAATTCA TAGCTGTCAGCGCTTGT TGG ATATGCGCTGATACCGG TTTTTGCTTCTGTCA Ajs_0025 27726 - 27142 - | NADPH-dependent FMN reductase TERM 36 28241 - 28202 - g 73 -13.5 -3.27923 | gap 1, opp_overlap 28201, overlap 28203 CCTCAACAGCAGCAA GGGCCCGGCCGTGCGCGC CACGC GCGCGCA-GGCCGACCGC ATCCTCTACAAAGCG TERM 37 28239 - 28203 - g 71 -14.5 -2.56432 | gap 2, opp_overlap 28201, overlap 28202 CTCAACAGCAGCAAG GGCCCGGCCGTGCGCGC CACGC GCGCGCA-GGCCGA-CC GCATCCTCTACAAAG Ajs_0026 27939 - 29924 + | tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA Ajs_0027 29921 - 30601 + | methyltransferase GidB Ajs_0028 30636 - 31250 + | lysine exporter protein LysE/YggA Ajs_0029 31267 - 32037 + | chromosome segregation ATPase Ajs_0030 32124 - 32666 + | hypothetical protein TERM 38 33254 - 33273 + G 72 -8.6 -4.11216 | gap 1, opp_overlap 33221, overlap 33250 GCGCTCGCGCAGCGC GGCG-AGCA ACC TGCTGCGCC TTTTGAACCTGGCCG Ajs_0031 32673 - 33668 + | chromosome segregation DNA-binding protein Ajs_0032 33694 - 34491 + | methyltransferase type 12 Ajs_0033 34652 - 35692 + | peptidoglycan binding domain-containing protein TERM 39 35716 - 35744 + T 100 -23.9 -4.99134 | opp_overlap 35716 CGCCCCTGAAAAAAA CGCCAGCGCGGCT CAA GGCCGCGCTGGCG TTTTTGCTTTCAACT TERM 40 35744 - 35716 - T 100 -23.2 -5.40072 | opp_overlap 35716 CGCCCCTGAAAAAAA CGCCAGCGCGGC TCAAG GCCGCGCTGGCG TTTTTGCTTTCAACT Ajs_0034 36177 - 35848 - | sulfite dehydrogenase (cytochrome) subunit SorB Ajs_0035 37504 - 36284 - | sulfite dehydrogenase (cytochrome) subunit SorA apoprotein TERM 41 37598 - 37637 + G 100 -9 -5.75945 | opp_overlap 37565 37563, overlap 37600 CTCAGTGAGCCGCTG CCGGCGCTGCCAGCGCCC GGCT GGCCACGGCCAGCGCCTG TTTTTTTTGCGCGAT TERM 42 37600 - 37635 + G 89 -10.2 -4.52949 | opp_overlap 37565 37563, overlap 37598 CAGTGAGCCGCTGCC GGCGCTGCCAGCGCCC GGCT GGCCACGGCCAGCGCC TGTTTTTTTTGCGCG Ajs_0036 37587 - 38165 + | hypothetical protein Ajs_0037 38761 - 38189 - | ECF subfamily RNA polymerase sigma-24 factor Ajs_0038 39749 - 38883 - | AraC family transcriptional regulator TERM 43 39128 - 39089 - G 70 -13.6 -3.01712 | opp_overlap 39103 GCTCCTGGCGGAACA GC-CGCGCCACCGTGCGC GGGCTG GCGC-CGGTGCCGCGCGC CCACTCGGCCAGCGT TERM 44 40495 - 40513 + G 75 -4.5 -4.61824 | gap 1, overlap 40497 GGCTTTCCTGCGTCT GC-CGGCC GTGT GGCTGTGC TTTTCGTTCTTCTTC Ajs_0039 39815 - 41077 + | major facilitator superfamily transporter Ajs_0040 42579 - 41155 - | Fis family transcriptional regulator Ajs_0041 43796 - 42717 - | integrase catalytic subunit TERM 45 43929 - 43895 - R 100 -15.7 -4.67755 | ATATCCATGGAAAAA CCCCGCCCGCACCCT GGAGG ACAGTGCAGGCGGGG GGTGGTGGCGGCCCG Ajs_0042 44423 - 44043 - | calcium-binding EF-hand-containing protein TERM 46 44699 - 44647 - g 75 -14 -3.28712 | gap 1, opp_overlap 44677, overlap 44650 GGGCCTGGGTGACAA CACCCGCGT-GTCCAAGGCCAGCGG CCGC CCGCAGGCCATGGGCGACGTGGACG AGCTCAACTCCCACA Ajs_0043 44579 - 45151 + | ATP:cob(I)alamin adenosyltransferase Ajs_0044 45943 - 45521 - | hypothetical protein TERM 47 45972 - 45991 + H 75 -12.1 -3.55801 | opp_overlap 45965 TCACATCAGGGCTGC GCCCGGC AGCGGC GCCGGGC TTTGGCACGATTGGT Ajs_0045 46167 - 47324 + | extracellular ligand-binding receptor Ajs_0046 48969 - 47449 - | Acetyl-CoA hydrolase TERM 48 48888 - 48917 + g 88 -9.9 -4.36914 | TGGCGCCGGCCGGGA TCAGGGCCGCGGC TTCG GCCGCGCTCATGA TTTTCTGGGCCAGAC TERM 49 49477 - 49489 + G 85 -10.5 -4.17491 | overlap 49484 49486 CTACCGCTGCGCGGC GCGCC ACG GGCGC TTTTCGACCTTTGGT Ajs_0047 49169 - 49909 + | hypothetical protein Ajs_0048 51331 - 50045 - | uracil-xanthine permease TERM 50 51473 - 51497 + r 81 -7.8 -4.4009 | gap 1, overlap 51460 CGGGCCCATCGCCGC CGG-CCTGCCG AGCG TGGCGGGGCCG TTTTCTGCCGTCACG Ajs_0049 52832 - 51534 - | methyl-accepting chemotaxis sensory transducer TERM 51 51830 - 51801 - GR 81 -13.5 -3.62096 | gap 1, opp_overlap 51825 GGCCACCACGGCAAA GCCGCGCCCGGCCA CGC CGGC-GCGCGCGGC CTCCACCGCCGCGTT Ajs_0050 54834 - 52711 - | radical SAM domain-containing protein TERM 52 53136 - 53126 - GR 73 -8.2 -4.07568 | overlap 53127 TCGTTCTTGGCAAAA CCGC CCG GCGG CAGCGGGGCCAGGGT TERM 53 53615 - 53603 - GR 71 -6.2 -4.30014 | overlap 53605 TCGACGAAGTGAAAA CCGG TCTGC CCGG TCTCGGCCACGATGG TERM 54 54561 - 54547 - GR 72 -4.2 -4.56597 | overlap 54548 54549 GCGGCCCTGCAAAAA GGCC ATGGCTG GGCC GATGGTGGCCAGGTA TERM 55 54923 - 54935 + r 70 -10.5 -3.62046 | ACTTGTTCAGCGCAC GGCGC GGC GCGCC TTCTTGGCGGCGTAC TERM 56 55320 - 55374 + r 78 -14.3 -3.05596 | gap 2, overlap 55320 55342 CAGCACCGCCGTGCC CTGGCGCGCGCCTTGCGCCAGTTGCTG GTG CAGCATTTCGCGC-AG-CGCGCGGCGG TTGGGTAGGCCGGTA Ajs_0052 57274 - 56009 - | hypothetical protein TERM 57 56749 - 56732 - G 75 -9.1 -4.07568 | CCGCGTGGCGGAAAA GCGGCTG TCGG CAGCCAC CAGCAGCGGGGCCTG TERM 58 57361 - 57376 + H 70 -11.8 -3.14132 | opp_overlap 57359 CTTGCGTCAAGCACG GCGGCC ATGC GGCCGC TTCCTACGCCGGGCG Ajs_0053 57396 - 57686 + | hypothetical protein TERM 59 58549 - 58509 - g 70 -2.6 -4.59853 | gap 2, opp_overlap 58514, overlap 58511 58514 TGAATGCTTCAAAAA TAGTAGCTGATACCGCTTGC TAC GCAAGCGTCATC-GCC-CGA AATGATGCAGAGACT Ajs_0054 57800 - 60064 + | acetoacetyl-CoA synthetase Ajs_0055 61027 - 60098 - | LysR family transcriptional regulator Ajs_0056 61158 - 62144 + | hypothetical protein Ajs_0057 62141 - 63388 + | L-carnitine dehydratase/bile acid-inducible protein F TERM 60 63646 - 63596 - g 82 -6 -4.71828 | gap 2, overlap 63618 ACCGCAGCAAGAAAA GCGTGGTGCTGGACCTGAAGCAGC CTGCC GC-GCAGCAGGCCCTGCACG-CGC TGCTGGCCACGGCCG Ajs_0058 63385 - 64581 + | L-carnitine dehydratase/bile acid-inducible protein F TERM 61 64987 - 64943 - g 81 -11.5 -3.95324 | gap 2, overlap 64979 64982 CACCTCCAAGAACAA CCGCGCC-GT-GGTCACCTCG CTCAT CACGGTGACCAACCAGCGCGG CGAGCCGGTGATGGA Ajs_0059 64578 - 65045 + | hypothetical protein TERM 62 65472 - 65427 - g 83 -13.3 -3.78934 | gap 1 CGCGCTCTACAAGAA GATGAGCTACGACCCGCGCAAG GAC CTCGCGCCTGTCGC-GCTCACC GCAGTGGTGCCCCTG Ajs_0060 65113 - 66081 + | hypothetical protein TERM 63 66103 - 66093 - f 74 -2.4 -4.93547 | TTAAGCAAGGAAAAA GGGC ATA GGCC ATGTCGGTTCTGGAT TERM 64 67036 - 67018 - g 85 -10.2 -4.25104 | GGCCGTGCAGGAAAA GCTGGTGC AGG GCGCCAGC CCCGTCGTGGAGGCC Ajs_0061 66104 - 67261 + | acyl-CoA dehydrogenase domain-containing protein Ajs_0062 67276 - 68307 + | acyl-CoA dehydrogenase domain-containing protein Ajs_0063 68417 - 69205 + | enoyl-CoA hydratase TERM 65 69246 - 69235 - f 70 -7.2 -3.9941 | opp_overlap 69234 69239, overlap 69231 CGGCGGACAAGGAAA GGCC CGGC GGCC GTTCGATAATGCCGC TERM 66 69503 - 69483 - g 83 -9 -4.36914 | gap 1, opp_overlap 69483 GCTGGCGGCAGAAAA GCTCG-GCC ATGG GGCGCGAGC TGGATTCGCTGGCCG TERM 67 69575 - 69601 + G 75 -2.8 -4.7373 | overlap 69554 GCCTGCGGCATGCAG GGGCTGTACGAC CGC GTGGTGCTGGCC TTTTTCGTGGCCTGC Ajs_0064 69263 - 69886 + | CDP-diacylglycerol--serine O-phosphatidyltransferase TERM 68 69899 - 69912 + F 71 -9.5 -3.70811 | TGAGCATCCCCCCGC GGCGC TGGC GCGCC TTTCCCCTTCTCTCG TERM 69 70071 - 70094 + F 93 -8 -5.0538 | overlap 70074 ACACTTTGCGGCTTC GAGGCGGCGC CCGT GCGCGGCGTC TTTTTTCCCATCCGA TERM 70 70399 - 70347 - g 100 -19.8 -3.01712 | CCGCGCTGGTCAAGA CGCTGC-GCAGCCACCGCACGCAGCC CGT GGCCGTGCGCGGCGGCAGCAGC-GCG CAGAGGCAGGACGCG TERM 71 70848 - 70895 + G 74 -7.6 -4.24342 | gap 1, opp_overlap 70864 AGCCGGCCCAGGTGC GGCTGGACGGTGAGAAGCTGCTC ATC GAGCCGC-TGTGACCGTCCCCCC TTTCTTACTCCACAG Ajs_0065 70118 - 70885 + | septum site-determining protein MinC Ajs_0066 70937 - 71752 + | septum site-determining protein MinD TERM 72 71821 - 71796 - g 83 -3.9 -5.18726 | gap 1, overlap 71798 71799 71817 CGGCGAGAAGAAAAA GACG-GCCTCGG TGG CCAAGGAGCGCC TGCAGATCATCCTGG Ajs_0067 71758 - 72024 + | cell division topological specificity factor MinE TERM 73 72077 - 72101 + T 73 -11.4 -3.5511 | gap 1, overlap 72077 72089 CGGCCGGGCGTGCCC G-CGCTCCGGC GCAA GCCGGGGCGGC TATTTCTCCATCGGG Ajs_0068 72661 - 72101 - | flavin reductase domain-containing protein Ajs_0069 72768 - 73550 + | alpha/beta hydrolase fold TERM 74 73633 - 73644 + F 81 -7.2 -4.42238 | opp_overlap 73631, overlap 73632 GCAATAAACCACATC GCGC GCCC GCGC TTTTGGTTAGGCTGG TERM 75 73776 - 73790 + G 75 -9.2 -4.08216 | CAGCCCGTGAAGGTG GGGGTC ATC GGCCCC TTTTCGGGGCCGTCG Ajs_0070 73689 - 74879 + | extracellular ligand-binding receptor Ajs_0071 76256 - 74892 - | D-amino-acid dehydrogenase Ajs_0072 76320 - 77231 + | chromosome replication initiation inhibitor protein Ajs_0073 77302 - 77934 + | TetR family transcriptional regulator Ajs_0074 78357 - 77935 - | UspA domain-containing protein Ajs_0075 79322 - 78477 - | metallophosphoesterase Ajs_0076 80310 - 79339 - | LysR family transcriptional regulator Ajs_0077 80434 - 80874 + | hypothetical protein TERM 76 80927 - 80910 - T 74 -12.7 -3.281 | opp_overlap 80910, overlap 80908 CGCCAACCGACAACA GGGCACC TTCG GGTGCCC TTTTTGCTATGTGCG TERM 77 80910 - 80927 + T 100 -12.7 -4.84527 | opp_overlap 80910 80908 CGCCAACCGACAACA GGGCACC TTCG GGTGCCC TTTTTGCTATGTGCG TERM 78 80977 - 81003 + T 86 -15.9 -3.64198 | gap 1, opp_overlap 80977 ACATTCATGAAAAAA CCCCGCG-CCAC AGAT GTGGTCGCGGGG TTGTGTGTGTAGGCC TERM 79 81003 - 80977 - T 100 -15.9 -5.17353 | gap 1, opp_overlap 80977 ACATTCATGAAAAAA CCCCGCG-CCAC AGAT GTGGTCGCGGGG TTGTGTGTGTAGGCC Ajs_0078 82923 - 81052 - | phosphoenolpyruvate carboxykinase TERM 80 83047 - 83030 - R 78 -3.4 -5.00616 | gap 1 CTGCCTTTGAAAAAA CCG-CTG GGACT CAGTCGG CTGGCGAAACGGGGG TERM 81 83234 - 83217 - R 100 -14.1 -4.92756 | ATCACCAAAAACAAA GCCCCGC AGAG GCGGGGC TGGGTGGCGAGCGGG Ajs_0079 83491 - 83258 - | hypothetical protein Ajs_0080 84726 - 83527 - | threonine dehydratase TERM 82 83556 - 83600 + g 70 -10.6 -3.53343 | gap 1, overlap 83550 CCTCCATCTGCGCGG CGCGCAGCAGGTCCAGCA-CC TGCT GGATGTGGGCCTTGCCGCGCG TTTGCAGCACCAGTT Ajs_0081 86492 - 84837 - | acyl-CoA dehydrogenase domain-containing protein Ajs_0082 87307 - 86645 - | hypothetical protein TERM 83 86767 - 86729 - G 74 -12.3 -3.56643 | gap 1, opp_overlap 86742 GCTATAGGTCTCAAA GCCCGGCCCCTTGGCGGC GAGC GCGGCCACGGG-CTGGGC ATGGCACGCTTGCTC Ajs_0083 88455 - 87355 - | methionine synthase (B12-dependent) Ajs_0084 88553 - 90424 + | ATP-dependent DNA helicase RecQ Ajs_0085 91111 - 90425 - | anaerobic ribonucleoside-triphosphate reductase activating protein Ajs_0086 91292 - 91101 - | hypothetical protein Ajs_0087 93410 - 91374 - | anaerobic ribonucleoside triphosphate reductase TERM 84 91714 - 91743 + g 81 -10.6 -4.06177 | TACGGCTGCGCCTCG GTGCCGGCCTGC AGGATG GCGGGCCAGCGC TTCTTGTCTTCTTTG TERM 85 92505 - 92490 - G 72 -6.8 -4.25104 | CTCGCCGTAGCAAAA CGGCAT CTCC ACGCCG CCGATCACCGGCACC Ajs_0088 97032 - 93706 - | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) TERM 86 94074 - 94084 + g 72 -4.6 -4.56597 | GGATGGTGGTCTCGG CCTG TTC CGGG TTTTTCAGCGCGACG TERM 87 95354 - 95408 + g 79 -16.3 -2.90075 | ACCGGACTGGGGCTC TGGTCCAGCGCCTCCGACAGGCGGT GGATG ACGGCCTCCTGGCGGCGCTGGGCCG TGTGCTTCCAGAGGG TERM 88 95548 - 95590 + g 100 -20.6 -3.14132 | gap 1 AGCCCAGCGGGCCGT CGCGCCGCCCGGTGC-GCG CCCAGC CGCCGCATCGTGCGGCGCG TTCGTCACCACGGCG TERM 89 95972 - 95948 - G 74 -12.2 -3.5944 | gap 1, opp_overlap 95955 ACGGACAGCTCGAAA TGCCGCTCGCC CAGG GGC-AGCGGCA ACGTGATGCGCTGGC TERM 90 96064 - 96032 - G 74 -12.5 -3.53811 | opp_overlap 96032 96034, overlap 96035 GCCAGTGCCTCGAAA CACTGCGCGGCCGCC GCC GGCGGCAGCGCCTCG TCCAGCGTTTTTCCC TERM 91 96032 - 96071 + g 76 -6.2 -4.56775 | gap 1, opp_overlap 96032 96035, overlap 96034 GCCAGTGCCTCGAAA CACTGCGCG-GCCGCCGCC GGC GGCAGCGCCTCGTCCAGCG TTTTTCCCAGCAACT TERM 92 96061 - 96035 - G 71 -15 -2.60615 | opp_overlap 96034 96032, overlap 96032 AGTGCCTCGAAACAC TGCGCGGCCGCC GCC GGCGGCAGCGCC TCGTCCAGCGTTTTT TERM 93 97181 - 97147 - R 77 -4.1 -4.83169 | gap 1, overlap 97153 ATCGCCCCACAAAAA CGACAAGCCCGCCGGC AGCC GCGGAGGGGCCCG-CG CGGCGCAAAAAAAAG TERM 94 97212 - 97196 - R 100 -10.8 -5.75342 | overlap 97206 GCGGCGCAAAAAAAA GCCGGC ACAAG GCCGGC TGAAAAGCAAGGTGC Ajs_0089 98472 - 97384 - | transposase, IS4 family protein Ajs_0090 98635 - 99714 + | integrase catalytic subunit Ajs_0091 100244 - 99819 - | hemerythrin HHE cation binding domain-containing protein Ajs_0092 102625 - 100319 - | nitric oxide reductase large subunit TERM 95 102066 - 102050 - G 86 -5 -5.18726 | opp_overlap 102056 102058 102059, overlap 102032 102051 GGTCCAGAAGAAAAA GCCCGC CATCT GCGCGC GGCGCTCGGCGCCGG TERM 96 102056 - 102089 + g 70 -3.7 -4.45544 | gap 1, opp_overlap 102050 102051, overlap 102058 102059 GAAGAAAAAGCCCGC CATCTGCGCGCGGCGC TCG GCGCCGGGTA-GGGTG TTTTCCTTCATCGCG TERM 97 104355 - 104399 + G 72 -8.3 -4.08064 | opp_overlap 104355 104356, overlap 104356 CAGCAACCTGCACAA GCTCGCGCGGCGGCTGGGCCT CAA AGGATGAGGCTCCGCGCGGGG TTTTGAAACAAAATT Ajs_0093 102763 - 104385 + | anaerobic nitric oxide reductase transcription regulator TERM 98 104449 - 104413 - f 90 -8.8 -4.86731 | opp_overlap 104413 104415, overlap 104415 GGTTTTGAAACAAAA TTGCCTCTAGCGCTTA TCCAG TAAGCGGTAGAAGCTA TTAATTGAGTAGCAA TERM 99 104484 - 104468 - f 100 -13.7 -4.77438 | ATTGAGTAGCAAAAA GCCTCCC CTC GGGAGGC CGCCACCGTTGGCGC Ajs_0094 104530 - 105579 + | hypothetical protein Ajs_0095 105662 - 107050 + | L-serine ammonia-lyase Ajs_0096 107110 - 108318 + | aspartate aminotransferase TERM 100 109341 - 109382 + G 81 -16.5 -3.14132 | gap 1, opp_overlap 109340 109339 CGCTTTGCTGAAATG GGCGGCGTGCCCGGT-GGCG AGA CGCCGGCCGAGTACGACGCC TTCATCGCCCAGGAA Ajs_0097 108498 - 109448 + | hypothetical protein TERM 101 109453 - 109472 + F 89 -12.8 -4.22652 | opp_overlap 109450 109449 CCCTCGAATAACCCG GGCGGGGC GCGC GCCCCGTC TTTTCACTGCTCTCC Ajs_0098 109495 - 111063 + | AMP-dependent synthetase and ligase TERM 102 111329 - 111319 - g 70 -8.2 -3.96148 | opp_overlap 111319, overlap 111320 GTGCTGGAGTACAAA CCCG GGG CGGG CGGCACGCTGGCCTC Ajs_0099 111091 - 112086 + | hypothetical protein Ajs_0100 112249 - 112716 + | hypothetical protein Ajs_0101 113763 - 112744 - | hypothetical protein TERM 103 113508 - 113524 + g 71 -9.3 -3.78934 | TCTCGCCGGCGATCA GGCCGGC CGC GCCGGGC TTGTTGTCCACCACC TERM 104 113653 - 113617 - G 77 -13.6 -3.57144 | overlap 113618 GCCGCCAGCGGCAAA GGGCACCACCACCCGC ACGGG GCGGGTGGCGAAGCCG GCGGGCGCGGCCTGC TERM 105 113652 - 113618 - G 80 -17.1 -2.74144 | overlap 113617 CCGCCAGCGGCAAAG GGCACCACCACCCGC ACGGG GCGGGTGGCGAAGCC GGCGGGCGCGGCCTG Ajs_0102 114989 - 114003 - | hypothetical protein Ajs_0103 116188 - 115034 - | acyl-CoA dehydrogenase domain-containing protein TERM 106 115433 - 115400 - G 72 -4.5 -4.56597 | gap 1 CGTCTTTTGCAAAAA GGTCTCGATGCA-GCT GGC AGCGCGCACCGCCACC ACCAGGCGCTCTTGC Ajs_0104 117841 - 116267 - | AMP-dependent synthetase and ligase TERM 107 116533 - 116564 + g 93 -10.8 -4.42851 | gap 1, overlap 116535 CGCCCACCACGGCCA CTTCCT-GCGCGCCG GGG TGGCGCGCCAGGGCG TTTTCAATTTCTTGC TERM 108 117908 - 117936 + H 83 -5.3 -5.02074 | opp_overlap 117909, overlap 117909 117910 AAAAATGCGAAATGC ATGTCTCACAAAA ATG TTGTGTGAGACGA TTTTTTCAGGCGTAC Ajs_0105 118051 - 119229 + | acetyl-CoA acetyltransferases Ajs_0106 119295 - 120062 + | short-chain dehydrogenase/reductase SDR TERM 109 120650 - 120666 + G 72 -13.7 -3.04144 | CAAGCGGGGTTTGGC GGCCACC GCT GGTGGCC TGTTGCGCCTGCCCA Ajs_0107 120249 - 121013 + | enoyl-CoA hydratase TERM 110 121056 - 121046 - f 71 -8.2 -3.85817 | opp_overlap 121046 ACGCCCGTCCATAAA GCGC AAT GCGC TATCTATTAAATAGC TERM 111 121394 - 121343 - g 77 -10.6 -3.78934 | gap 1, overlap 121340 CGTGGTGGACAACAA GCCCGGCGCGGGCGGCTCGCTGG GCAGCAG CCT-CGTGGCGCGCGCGCCGGCC GACGGTTACACCGTG Ajs_0108 121113 - 122111 + | hypothetical protein TERM 112 122347 - 122372 + G 77 -15.5 -3.06796 | gap 1, overlap 122369 CCGCTGCGGTGGACG CTGCGC-TGCGC CAG GCGCATGCGCAG TTCGGTGACATCGAC Ajs_0109 122124 - 122930 + | short-chain dehydrogenase/reductase SDR Ajs_0110 122927 - 123721 + | enoyl-CoA hydratase/isomerase Ajs_0111 123762 - 124550 + | regulatory proteins, IclR TERM 113 124632 - 124650 + G 77 -8 -4.4009 | CGTACTGGAGATTGG CGGCCTGG GGC CGGGGCCG TTTTGTGCGATGCAC TERM 114 125455 - 125483 + G 81 -10.9 -4.15833 | overlap 125436 CCGCGTGCGCACTGG CAGGCGCTGCTGG AGC CCACCGACGCCTG TTTTGGCGTCGTGCT Ajs_0112 124594 - 125706 + | L-carnitine dehydratase/bile acid-inducible protein F Ajs_0113 126966 - 125743 - | major facilitator superfamily transporter TERM 115 125843 - 125889 + g 70 -13 -3.05384 | opp_overlap 125795 125827 ACCGCGCGGTAGGGC TC-CAGCCCGGCGCTGGTGGCC CAGGC GGCCAC-GGCGCCGGTCAGCGA TTGCATCAGCGCCAC TERM 116 126471 - 126438 - G 73 -14.5 -2.82987 | overlap 126429 126427 126466 TCAACAGCCACGACA GCAGGCTCAGGCCTG CCAG CAGGCCAAAGCCGGC ACGCCAGCCCCAGTG TERM 117 126860 - 126833 - G 86 -17 -3.27298 | overlap 126807 126805 GCCCCCAACGAGGAA GCCTGCAGGCCG AAAT CTGCCTGCAGGC CCTGGGCCACGATGG Ajs_0114 127918 - 127049 - | HpcH/HpaI aldolase TERM 118 127319 - 127280 - G 74 -12.1 -3.53224 | gap 1 CAGCTTGCCGCCAAA GCCCATGCGCCGCG-CGC GCTCG GCATCGCGGCCCATGCGC TCGGGATTGCGCGTG Ajs_0115 129119 - 128112 - | hypothetical protein TERM 119 128853 - 128895 + g 89 -17.6 -3.28712 | overlap 128855 GTCGGGCTTGGAGCG CACGATGCGCGCGGGCGCCA GCG TGCCGCCCGCGCCCACGGTG TTCTCCACCACCACG TERM 120 128855 - 128892 + g 85 -17.7 -2.52623 | gap 1, overlap 128853 CGGGCTTGGAGCGCA CGATGCGCGCGGGCGCCA GCG TGCCGCCCGCGCCCA-CG GTGTTCTCCACCACC Ajs_0116 130649 - 129285 - | MmgE/PrpD family protein Ajs_0117 131890 - 130700 - | L-carnitine dehydratase/bile acid-inducible protein F TERM 121 130754 - 130772 + g 73 -12.4 -3.40403 | GGCGCTCCAGCCCAG CGCGGCCA GGA TGGCTGCG TTGTGCTGGCCCACG Ajs_0118 133244 - 132084 - | acyl-CoA dehydrogenase domain-containing protein Ajs_0119 134221 - 133316 - | hypothetical protein TERM 122 134565 - 134531 - g 72 -15 -2.70932 | overlap 134533 GGTGGTGGTGAACGA CATCGGCACCTCCACC ACG GGCGAAGGCACCGACG CCGGCCCCGCGCAGA TERM 123 134563 - 134533 - g 71 -14 -2.90075 | overlap 134531 TGGTGGTGAACGACA TCGGCACCTCCACC ACG GGCGAAGGCACCGA CGCCGGCCCCGCGCA Ajs_0120 134415 - 135332 + | short-chain dehydrogenase/reductase SDR TERM 124 135398 - 135342 - f 70 -10.1 -3.64198 | gap 3, opp_overlap 135353, overlap 135339 135337 135343 GTGTGACAGAGACAA CCCCCTGAGGCGCTGCGCGCCTC-GGTG CAGC CGCCAGAGGCG-GCAGCTCTTC-GGGGC CGTCCAAGCCTGCGC TERM 125 135397 - 135343 - f 72 -13.6 -2.78197 | gap 3, opp_overlap 135353, overlap 135339 135337 135342 TGTGACAGAGACAAC CCCCTGAGGCGCTGCGCGCCTC-GGTG CAGC CGCCAGAGGCG-GCAGCTCTTC-GGGG CCGTCCAAGCCTGCG TERM 126 135353 - 135388 + F 75 -14.1 -3.02144 | opp_overlap 135339 135337 135343 135342 ACAACCCCCTGAGGC GCTGCGCGCCTC-GGTG CAGC CGCCAGAGGCG-GCAGC TCTTCGGGGCCGTCC Ajs_0121 135595 - 136488 + | dehydratase TERM 127 136539 - 136500 - f 73 -2.8 -4.7497 | gap 1, opp_overlap 136501 136502, overlap 136501 136502 136504 GTGAGCTATCAAAAA GTGAGCTGCCGGCGCTT CATAGGT AAGCGCTGG-AGCTCGT TCTGAATCAAAAACC Ajs_0122 136567 - 137361 + | enoyl-CoA hydratase TERM 128 138582 - 138553 - g 70 -9.9 -3.72576 | gap 1 GCCGCCCGCAGCAAA GGCGGCCTGC-CCA TCG TGGCGCTGCCCGCC ACCGCCAAGGGCAAG TERM 129 138779 - 138801 + G 70 -10.5 -3.75461 | opp_overlap 138779, overlap 138780 GCCAGGCCCATGAGA CGCTGCGCC ATTGC GGCGCAGCA TTTAGTCAAACTTTA TERM 130 138780 - 138800 + G 71 -14 -2.84795 | opp_overlap 138779, overlap 138779 CCAGGCCCATGAGAC GCTGCGCC ATTGC GGCGCAGC ATTTAGTCAAACTTT Ajs_0123 137494 - 138819 + | acetyl-CoA hydrolase/transferase TERM 131 138817 - 138853 + F 100 -11.7 -4.50241 | opp_overlap 138813, overlap 138819 TTTAGTCAAACTTTA TAGCTACTAGCGCTTAT CAG ATAAGCGTTAGAAGCCA TTTTCATTCATATTT TERM 132 138819 - 138851 + F 74 -14.3 -2.56026 | opp_overlap 138813, overlap 138817 TAGTCAAACTTTATA GCTACTAGCGCTTAT CAG ATAAGCGTTAGAAGC CATTTTCATTCATAT TERM 133 139456 - 139479 + G 81 -14.6 -3.53224 | gap 1 AGCCACCAGCGCGCG GCGG-CCGCCT GGG AGGCGGGCCGC TTTGCCGACGAAATC Ajs_0124 138883 - 140091 + | acetyl-CoA acetyltransferase TERM 134 140186 - 140203 + F 70 -10.5 -3.65046 | overlap 140185 GGCTGCGGCGCAAGG CGCGCGC CAGC GTGCGCG TTGTTGGCCTGGCCC TERM 135 140468 - 140495 + G 70 -13.4 -3.01712 | gap 1 GTGGGCTATGCCGCG GGCG-GCCCCGTG GAC CAGGGGGCGCGCC TGTTCGCACCGGCCC Ajs_0125 140351 - 141325 + | hypothetical protein TERM 136 142835 - 142815 - g 70 -11.1 -3.5764 | overlap 142818 AAGCGCACCCTGAAA GACCAGGCC TTG GGCCTGACC ACCTGAACGATAGGA Ajs_0126 141327 - 142841 + | AMP-dependent synthetase and ligase Ajs_0127 142859 - 143836 + | hypothetical protein Ajs_0128 143932 - 144315 + | hypothetical protein Ajs_0129 144312 - 145520 + | thiolase Ajs_0130 145547 - 146704 + | acyl-CoA dehydrogenase domain-containing protein TERM 137 146811 - 146785 - g 78 -13.7 -3.53012 | GCGCCGCCGGGCAAA GTGCAGGTGCG CCTGC CGCACCTGCGC GAGGAACTGCTCAAC Ajs_0131 146701 - 147123 + | hypothetical protein TERM 138 147229 - 147171 - T 85 -14.5 -3.66874 | gap 1, overlap 147174 CCAATTTCATTCAAA GAT-CGCACGGGCCGCTGCCGCTGCGGC GGTC ACTCCAGCTGCAGCCGCCCCTGCGCATC GGCCACCAGCAGGTC TERM 139 147225 - 147174 - T 80 -16.4 -2.64322 | overlap 147171 ATTTCATTCAAAGAT CGCACGGGCCGCTGCCGCTGCGGC GGTC ACTCCAGCTGCAGCCGCCCCTGCG CATCGGCCACCAGCA Ajs_0132 148108 - 147200 - | LysR family transcriptional regulator Ajs_0133 148245 - 149531 + | L-carnitine dehydratase/bile acid-inducible protein F TERM 140 149565 - 149545 - T 93 -18.3 -3.28924 | opp_overlap 149551 149552 GAGGCGGCGTCAGAA GGCGTGGGC CAC GCCCACGCC GAACGCCGTGCGCGA Ajs_0134 150513 - 149539 - | porin TERM 141 150581 - 150547 - R 76 -10.8 -3.72576 | CCTTGTGTGATGAAA CGCCC-TGCCGCTCCC TCGCG GGGAA-GGCATGGGCG TGGCGCTGCCGCAGG TERM 142 150639 - 150617 - R 74 -9.9 -3.78022 | overlap 150633 GGGAGAGCGATGAAA CTGGCCATC GTAGG AATGGCCAG CGCGATGACGCGCCC TERM 143 150748 - 150711 - R 95 -10.5 -4.63218 | gap 1, opp_overlap 150711 150710, overlap 150712 CCTGCCCGAACAAAA GGGCGCATGCAGGCCGCC AAG GGCAGTCTGCACG-GCCG ATTATAAAAATGGGG TERM 144 150747 - 150712 - R 77 -14 -3.3761 | gap 1, opp_overlap 150711 150710, overlap 150711 CTGCCCGAACAAAAG GGCGCATGCAGGCCGCC AAG GGCAGTCTGCACG-GCC GATTATAAAAATGGG TERM 145 150849 - 150832 - R 100 -14.1 -5.30616 | opp_overlap 150834 GCAGGCAAAGAAAAA GGCGGCC CGCA GGCCGCC TTGCGCACGGAGCGG Ajs_0135 152175 - 150871 - | Glu/Leu/Phe/Val dehydrogenase, C terminal TERM 146 151574 - 151542 - G 72 -14.2 -3.04144 | CGCCCACGGTGAACA CGCCGCGGCC-CGTGG CCT CCACGCGGCC-CAGCG AGCCACCCAGGTCCA Ajs_0136 153273 - 152356 - | hypothetical protein Ajs_0137 154226 - 153303 - | LysR family transcriptional regulator TERM 147 154654 - 154666 + G 74 -2.6 -4.79223 | overlap 154648 CACGGTGATGGAGGC CGGC CTGCT GCTG TTTTTCCTCGTCTAC Ajs_0138 154298 - 154786 + | transmembrane pair domain-containing protein TERM 148 154791 - 154826 + T 85 -3.3 -5.28683 | gap 1, overlap 154793 GTGCTCCTTAGTTCA TAGCTGCTTGCGCTTG ACTGG TAAGCGCTAG-AGCCA TTTTTTACTCTTGCT Ajs_0139 155757 - 154831 - | LysR family transcriptional regulator TERM 149 154953 - 154912 - G 73 -14.3 -3.15861 | CAGTAGCGCCACGAA CTCGCGCGCCGCGGCGC TGCGCGAG GCGCCGCGGCGCCACAG CAGGCCGGCGCGGCG TERM 150 155476 - 155458 - G 74 -7.4 -4.1673 | GAAGCGCGTAAGAAA GGTGGG GATCACG CCCACC TGGAGCGTGCCGGTC TERM 151 155857 - 155881 + H 81 -4.1 -5.00616 | TTCGCCCCGATGCCA GCGCTAAGGTC ATG GCCCGTAACGC TTTTTTCGCCACGGC Ajs_0140 155906 - 157108 + | muconate and chloromuconate cycloisomerases Ajs_0141 157137 - 157433 + | muconolactone delta-isomerase Ajs_0142 157479 - 158402 + | intradiol ring-cleavage dioxygenase Ajs_0143 158429 - 159421 + | hypothetical protein TERM 152 159482 - 159444 - T 78 -10.4 -4.00042 | opp_overlap 159445, overlap 159445 159447 GTTGCTATGAAATAA GGAGCTTTCAGCGC TTGATAGAAGG GCGCTGAAAGCTCT TTTGGCTTGTAATCT TERM 153 159445 - 159481 + T 100 -15.3 -4.33151 | opp_overlap 159444 159445 159447 TTGCTATGAAATAAG GAGCTTTCAGCGCTT GATAGAA GGGCGCTGAAAGCTC TTTTGGCTTGTAATC TERM 154 159481 - 159445 - T 75 -13.9 -2.99704 | opp_overlap 159445, overlap 159444 159447 TTGCTATGAAATAAG GAGCTTTCAGCGC TTGATAGAAGG GCGCTGAAAGCTC TTTTGGCTTGTAATC Ajs_0144 160920 - 159508 - | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein TERM 155 159907 - 159952 + g 70 -5.9 -4.20106 | opp_overlap 159903 159901, overlap 159908 GCTGTAGAACAGCAC GCGCGGGCGCAGCACGCGG CGCAGCAT CTGTGCGCTGCTCCAGCGG TTTTGCATGCCGTTT TERM 156 160715 - 160705 - G 76 -8.2 -4.28254 | GCCGAACAGGTAAAA GCGC CGC GCGC CCAGGTCGAACAGCA Ajs_0145 161578 - 160964 - | ubiquinol-cytochrome c reductase, iron-sulfur subunit TERM 157 161159 - 161111 - G 83 -13 -3.79906 | GCAGGGGCAGAAGAA GCCCCCGGGCCAGCCCGC-GCCCA GGC CGGACTGC-GGCGCGCCCGGGGCC ACGGCCGTGGGCGAG Ajs_0146 161755 - 163134 + | sigma-54 dependent trancsriptional regulator TERM 158 164748 - 164726 - g 81 -5.5 -4.72497 | gap 1, overlap 164727 164728 CATCGAGGAAGAAAA GCGCCAGCAG GAAG CCGCCGGC-C TGGACGTGTCCAGCA Ajs_0147 163503 - 166241 + | methionine synthase (B12-dependent) Ajs_0148 166277 - 167878 + | peptidoglycan binding domain-containing protein Ajs_0149 167912 - 168484 + | hypothetical protein TERM 159 168526 - 168509 - T 81 -14.1 -3.54382 | opp_overlap 168509 168521, overlap 168505 CCGCAAGAGAACCAA GGCCCCG CATG CGGGGCC TTTTTCATGTCTGAG TERM 160 168509 - 168526 + T 100 -14.1 -4.84527 | opp_overlap 168509 168505, overlap 168521 CCGCAAGAGAACCAA GGCCCCG CATG CGGGGCC TTTTTCATGTCTGAG Ajs_0150 169090 - 168554 - | shikimate kinase TERM 161 168852 - 168803 - G 83 -15.5 -3.59738 | opp_overlap 168804 CATCACATGGGGAAA GCTGCGGCGCAGCGTGGCGCG GTTGTCCT CGCGCAGCACGGCGCCGCCGC CGGTGGACAGCACCA TERM 162 169507 - 169558 + G 71 -12.3 -3.23692 | gap 2, overlap 169515 GGTGGTGCGCCTGGC GCTGGCCAGCG-CGC-AGGAGCC GGCCGAGG GGCGCCTCGCGTCGATGGCCGGC TTCGTGCTGCTGCTG Ajs_0151 169220 - 170137 + | ribonuclease BN TERM 163 170207 - 170236 + F 79 -8.6 -4.34402 | gap 2 AGCCTTGGCGCCGGT GCCGTGGCGGCTGC ATGC GCAGCC-C-GCGGC TTTTCCTCTGGCAAC Ajs_0152 170221 - 171105 + | 17 kDa surface antigen TERM 164 171190 - 171155 - T 85 -10.4 -4.2558 | opp_overlap 171161, overlap 171160 171161 CAGGTGCTACGAAAA TAAAAGCGGCCTGCGC TTGC GGGCAGGCCGTTTTGA GGGGGATTGGCGTTG TERM 165 171185 - 171160 - T 100 -10.3 -5.13722 | opp_overlap 171161, overlap 171155 171161 GCTACGAAAATAAAA GCGGCCTGCGC TTGC GGGCAGGCCGT TTTGAGGGGGATTGG TERM 166 171161 - 171184 + T 90 -13.8 -4.08692 | opp_overlap 171160 171155 171161 CTACGAAAATAAAAG CGGCCTGCGC TTGC GGGCAGGCCG TTTTGAGGGGGATTG TERM 167 171184 - 171161 - T 81 -13.8 -3.67149 | opp_overlap 171161, overlap 171160 171155 CTACGAAAATAAAAG CGGCCTGCGC TTGC GGGCAGGCCG TTTTGAGGGGGATTG Ajs_0153 172048 - 171275 - | ferredoxin--NADP(+) reductase Ajs_0154 172308 - 173495 + | extracellular ligand-binding receptor TERM 168 174555 - 174601 + G 86 -17.9 -3.1505 | gap 1 GCACGTGGCGTGGGC GCGCCCGAGGCGCCGCTGCGCC AGGC GGGGCAG-GGTGCCACGGCCGC TTGGTGCGCGCTGGT TERM 169 175022 - 175040 + G 79 -11.6 -3.77119 | GTGGCCGCCGCAGTG GGCCGCGC AGG GCGCGGGC TTCTATTGGTTGGTG Ajs_0155 173568 - 175535 + | inner-membrane translocator Ajs_0156 175532 - 176290 + | ABC transporter related Ajs_0157 176287 - 177066 + | ABC transporter related Ajs_0158 178014 - 177097 - | LysR family transcriptional regulator Ajs_0159 178123 - 178932 + | short-chain dehydrogenase/reductase SDR TERM 170 179059 - 179029 - T 76 -8 -4.32651 | overlap 179031 AATAACGTAGCAAAA CGGGGCGGGTGGGG CAT CCCCGCCCGGGGCG CTCAGAAGGCTTCCC Ajs_0160 180800 - 179061 - | methyl-accepting chemotaxis sensory transducer TERM 171 180459 - 180471 + g 88 -10.5 -4.3129 | CGCCTTCTGAATGTC GGCCC ACA GGGCC TTTTCCTCGTCGCTG Ajs_0161 182384 - 180846 - | Mg chelatase, subunit ChlI TERM 172 181359 - 181338 - G 78 -14.4 -3.62096 | CGCCACGAGCTGAAA GCGCGCCG GGAACT CGGCGCGC TGCGCCGCCCGGGCG Ajs_0162 182604 - 183335 + | hypothetical protein Ajs_0163 183356 - 183694 + | nitrogen regulatory protein P-II Ajs_0164 183741 - 185168 + | ammonium transporter TERM 173 185246 - 185264 + F 100 -17.4 -4.86731 | CCTGTCCCGTTTTTG GGCCCGCC CTT GGCGGGCC TTTTCTTTGGGCGGC Ajs_0165 185308 - 186258 + | gluconolactonase TERM 174 187338 - 187373 + G 77 -4 -4.7254 | gap 1, overlap 187340 GTGCTTCTCTATTCA TAGCTGCTAGCGCAGAT GGG ATAAGCGCTAG-AGCCA TTTTTGATACAAAAT Ajs_0166 186362 - 187471 + | FAD linked oxidase domain-containing protein Ajs_0167 187474 - 188271 + | hypothetical protein TERM 175 188642 - 188611 - g 89 -10.9 -4.2558 | gap 3, overlap 188612 CATCGTCGAGGAAAA GGTGCCG-CGCC-CGC GCG GCGAGGCGGCGGC-CC GCTGGATGCTCAAGG glcF 188297 - 189535 + | glycolate oxidase iron-sulfur subunit TERM 176 189553 - 189586 + F 75 -14.5 -2.72511 | gap 1, overlap 189551 189554 GCGGGTTTTGACCGC CGCGCGGGGCGGGCTT TCG GGGCCCGGC-CGCGCG CTTTCGAGCCATGAA TERM 177 189554 - 189587 + F 85 -14.5 -3.54424 | gap 1, overlap 189551 189553 CGGGTTTTGACCGCC GCGCGGGG-CGGGCTT TCG GGGCCCGGCCGCGCGC TTTCGAGCCATGAAC TERM 178 190113 - 190073 - g 73 -14 -3.16564 | gap 1, opp_overlap 190094, overlap 190108 GGCCCAGGGCATGAA GCGCCACGACCTGCA-GGG CCAG CCCGTGGAGGACATGGCGC CCGAGCATGTGCACC TERM 179 190263 - 190301 + G 70 -10.8 -3.54424 | opp_overlap 190277 GACGCGCTGGTGCGC GGCCGCGACGAGAAGGCC AAC GCCCTGCTCGATGAGGCC TTTGCCGAGGTGGCC Ajs_0169 189597 - 190466 + | ProQ activator of osmoprotectant transporter ProP Ajs_0170 190545 - 190955 + | glyoxalase/bleomycin resistance protein/dioxygenase Ajs_0171 191048 - 191518 + | transcription activator, effector binding Ajs_0172 191596 - 192324 + | helix-turn-helix, type 11 domain-containing protein TERM 180 192426 - 192441 + T 70 -11.8 -3.22388 | GGCACGGTGAGAGCC GCGGGC CGTA GCCCGC TTGCTGCCTTGGCTG Ajs_0173 193040 - 192555 - | glutathione peroxidase Ajs_0174 193978 - 193037 - | hypothetical protein TERM 181 194094 - 194052 - R 84 -16.3 -3.04322 | opp_overlap 194053 194089 GTGAAGGCGCGAAGA CGCCCAGCCTTCGCGGC-GCA TTG TGCCGGCGCGACGGC-GGGCG CGCGGGGCTGCGCGG TERM 182 194089 - 194127 + r 93 -19.5 -3.10894 | opp_overlap 194052 GTGCCGGCGCGACGG CGGGCGCGCGGGGCTGC GCGGG GTAGCCCCACGCGCCGG TTCAGTGGTGGTCGT Ajs_0175 195406 - 194129 - | hypothetical protein Ajs_0176 195547 - 196644 + | alanine racemase TERM 183 197058 - 197085 + GT 100 -16.2 -5.00616 | GGGGCGGGCGCGACA GGCCGGGGCCTC GCAA GGGGCGCCGGCC TTTTTTGGGGGGGCC Ajs_0178 197721 - 197107 - | glutathione S-transferase domain-containing protein Ajs_0177 196653 - 197204 + | hypothetical protein Ajs_0179 198051 - 197869 - | hypothetical protein TERM 184 198344 - 198295 - g 93 -17.8 -3.62597 | gap 2 CGGACCGGGCAAGAA CCGCCTGAG-CGGGGCC-GGCCAG TACG CGGGCCTGGCCCAGGCGCAGGCGG TGATGCCGCTGGCCG TERM 185 198660 - 198645 - g 83 -4.6 -5.09426 | TCCAACTCGAAAAAA TCCTCG CCAC CGTGGA GGCCACGCAGCCCGC Ajs_0180 198161 - 199543 + | DNA repair protein RadA Ajs_0181 199613 - 200053 + | hypothetical protein TERM 186 200455 - 200439 - g 89 -10.1 -4.56775 | overlap 200440 ATCGGCTCGGAAAAA CTGGGCG TCT CGCCCAA GGGCAACAAGATTCA Ajs_0182 200100 - 201038 + | branched-chain amino acid aminotransferase Ajs_0183 201043 - 201249 + | hypothetical protein Ajs_0184 201358 - 202665 + | O-antigen polymerase Ajs_0185 202674 - 203831 + | glycosyl transferase, group 1 Ajs_0186 203828 - 204874 + | glycosyl transferase family protein Ajs_0187 204871 - 205848 + | hypothetical protein Ajs_0188 206973 - 205909 - | 2-nitropropane dioxygenase, NPD TERM 187 206472 - 206425 - G 76 -14.7 -3.14564 | GTAGTCGCCCAGGAA GGTGCCGCGGTGGCCGCCGGC CTCCAT GCCGCTGGCCACCACCGCATC GGCGCCCACGGCGGC TERM 188 206880 - 206860 - G 81 -12.5 -3.89346 | overlap 206861 GCCGCAGCCCAGAAA GCCCAGGCC GCC GGCCTGGGA GACGGCGGCGGCCAA TERM 189 206879 - 206861 - G 76 -16 -2.93393 | overlap 206860 CCGCAGCCCAGAAAG CCCAGGCC GCC GGCCTGGG AGACGGCGGCGGCCA Ajs_0189 207880 - 206978 - | LysR family transcriptional regulator TERM 190 208219 - 208234 + G 77 -3.9 -4.83615 | CCTGCATGGCACTGC CCTGG GTGGCA CCGGG TTTTTATGCACGCTG TERM 191 208311 - 208346 + G 70 -11 -3.53012 | gap 1, overlap 208342 208343 CTCACGCTGGCGATG GCGCTGCCCGTGGCCGC CGC GTGGCCG-GCGCTGCGC TTTGCGGCCGGGGCC Ajs_0190 207960 - 209228 + | hypothetical protein Ajs_0191 209964 - 209236 - | MOSC domain-containing protein TERM 192 209329 - 209304 - G 72 -14 -3.01712 | opp_overlap 209295 GGCGCCGCTGGAACA GCCGCTGCCA TGACGG CGGCAGCGGC AGCGCGAGGATTTCG TERM 193 209596 - 209586 - G 72 -8.2 -4.11216 | overlap 209587 GGCTGACCTCGAAAA CGGC GCT GCCG ATGCGCCACTGGTCC TERM 194 209695 - 209665 - G 70 -11.1 -3.53761 | gap 1, opp_overlap 209692 GAAGTTCTCGCCAAA GGCACCGG-GCTGC GCGA GCAGCGCCTGCGCC GTGGCGTGGCCCGCC Ajs_0192 210524 - 209961 - | hypothetical protein Ajs_0193 211889 - 210609 - | integral membrane sensor signal transduction histidine kinase Ajs_0194 212619 - 211864 - | two component transcriptional regulator TERM 195 212676 - 212710 + H 75 -4.2 -4.72846 | overlap 212677 TGGTATGATTTTGAT AGCTGTCAGCGCTT ATGTATC AAGCGCTGGAGGCC TTTTTGGCTCTATGC TERM 196 212858 - 212808 - g 78 -10.3 -4.05026 | gap 1, opp_overlap 212810 212851, overlap 212809 GTCAAATCCAAACAA CGCGTCG-CCGACCACGGCGAAGT CTTC ACCCCGCCGTGGATGGTCGAGGCC ATGCTCGATCTGGTG TERM 197 212857 - 212809 - g 72 -13.8 -3.02293 | gap 1, opp_overlap 212810 212851, overlap 212808 TCAAATCCAAACAAC GCGTCG-CCGACCACGGCGAAGT CTTC ACCCCGCCGTGGATGGTCGAGGC CATGCTCGATCTGGT TERM 198 213216 - 213170 - g 75 -7.3 -4.38712 | TGTACTGTTACAAAA CCTGGTGCATGGCGA-CGCGC TGACCAT GCGCGACCACCACGG-CCAGG CCATCACCTTTGCCG Ajs_0195 212784 - 213425 + | type III restriction system methylase TERM 199 213646 - 213611 - g 82 -12 -4.06687 | overlap 213612 213639 ACGGGTTACAAAGAA TCTGACCATTTTCGTG GCGT CACGAAAATGGTCACC CTGGGCAGTGGCGCC TERM 200 213645 - 213612 - g 77 -15.5 -3.0353 | overlap 213611 213639 CGGGTTACAAAGAAT CTGACCATTTTCGTG GCGT CACGAAAATGGTCAC CCTGGGCAGTGGCGC dinD 213422 - 214288 + | DNA-damage-inducible protein D Ajs_0197 214296 - 215984 + | Eco57I restriction endonuclease TERM 201 216431 - 216441 + G 74 -2.4 -4.82901 | overlap 216438 CTGAAGACCCACAGG CCGC GCC GCGC TTTTTGTGGAACGCC TERM 202 216519 - 216504 - g 70 -2.4 -4.59853 | overlap 216505 CCAACTGGCCAAAAA GCTGCA AGCC CGCCGC GTGCTGGTGCTGACC TERM 203 217693 - 217683 - g 74 -2.4 -4.72272 | GTGGTCTATCAAAAA CCCC AAC GGCG ACAACCCGAACGAGG Ajs_0198 215965 - 218511 + | type III restriction system endonuclease, putative TERM 204 218530 - 218564 + T 100 -18.7 -4.61231 | overlap 218531 TGATATTGTTTTGAT AGCTTCCAGCGCTTG TCTAT CAAGCGCTGGAAGCC TTTTTGGCCCTGTGC TERM 205 218531 - 218563 + T 100 -22.2 -3.36256 | overlap 218530 GATATTGTTTTGATA GCTTCCAGCGCTTG TCTAT CAAGCGCTGGAAGC CTTTTTGGCCCTGTG Ajs_0199 219892 - 218549 - | major facilitator superfamily transporter Ajs_0200 219954 - 220655 + | AraC family transcriptional regulator TERM 206 220709 - 220692 - f 78 -10.5 -4.04141 | opp_overlap 220692 220693, overlap 220693 CAATAATGAAGTAAA GCGCGCG GCAC CACGCGC GTTGCTCGATAGTTG Ajs_0201 220754 - 221659 + | hypothetical protein Ajs_0202 221756 - 222103 + | hypothetical protein TERM 207 222726 - 222685 - g 72 -14.5 -2.78816 | overlap 222661 TCATGGGCCATGAGA TGGCCCACGCGC-TGCGCG AGCATG CGCGCTCGCGCGTGG-CCA AGAGCCAGGTCACCA Ajs_0203 222189 - 223064 + | peptidase M48, Ste24p Ajs_0204 223889 - 223101 - | GntR family transcriptional regulator TERM 208 223174 - 223158 - G 75 -5 -4.57569 | overlap 223159 223160 GCAGCCCGGCAAAAA GGCGCG GCCTT CGCGCA GGGCGCGGATCAGCA Ajs_0205 225614 - 223914 - | sigma-54 dependent trancsriptional regulator TERM 209 224670 - 224687 + g 89 -9.8 -4.56597 | opp_overlap 224625, overlap 224640 224676 CACGCGCGCGGCGGT GGCGCC GGTGTA GGCGCC TTTTTCGGCGCCGAA TERM 210 225995 - 226015 + G 74 -5.4 -4.50058 | opp_overlap 226003, overlap 225989 225997 CGCGTGCTGGGCCGC CGCGACAA CGGCC TTGTCGAG TTTTCGTTCTCGATC Ajs_0206 225908 - 226123 + | phenol hydroxylase subunit TERM 211 227026 - 227007 - g 70 -6.3 -4.1822 | overlap 227008 TCGGACGCCAACAAA GCCCTGC TGCGCG GCTGGGC CGGCCACTGGATGGA Ajs_0207 226170 - 227165 + | methane/phenol/toluene hydroxylase Ajs_0208 227191 - 227460 + | monooxygenase component MmoB/DmpM TERM 212 228406 - 228396 - g 70 -2.4 -4.64676 | opp_overlap 228396, overlap 228398 GTACGCCGAAGAAAA CGGC GGC GCCC TGTTCAAGGACCTGG Ajs_0209 227485 - 229029 + | methane/phenol/toluene hydroxylase Ajs_0210 229026 - 229382 + | phenol hydroxylase region TERM 213 229971 - 229985 + G 76 -8.5 -4.24342 | overlap 229968 CCGCCTGCGCGTGGC CGGCC CCTAC GGCCG TTTCTTCGTGCGCGA Ajs_0211 229390 - 230451 + | oxidoreductase FAD/NAD(P)-binding subunit Ajs_0212 231358 - 230438 - | LysR family transcriptional regulator Ajs_0213 231485 - 231856 + | ferredoxin Ajs_0214 231878 - 232822 + | catechol 2,3-dioxygenase TERM 214 232959 - 232986 + T 79 -8.2 -4.2828 | overlap 232980 GGGCGTGGAAGGGCT GCAGGGCGCCAG CGTG CCGCCGCCCGGC TTTTACTACCTGGGC TERM 215 233630 - 233648 + T 70 -12.4 -3.14931 | CGAGGTGGTTTATCC CGTGCCCG GCG CGGGCATG TTCCTCAAGGGTGCG Ajs_0216 234681 - 233776 - | LysR family transcriptional regulator TERM 216 234247 - 234294 + g 77 -11.3 -3.77206 | overlap 234250 GGGCACCAGGCGGTT GAAGCCCACGCTG-ATGCGCCGC TCGC GCAGCGCCTGCAGC-TGGGCGTC TTTGGTCAGGTTATG TERM 217 235069 - 235051 - g 83 -4.4 -5.00616 | opp_overlap 235068 GCGCTGGGCAAAAAA GGCATTCC CGT GGGTTGCC GACAGGGCGGCTGCG TERM 218 235256 - 235242 - g 74 -2.1 -4.72272 | opp_overlap 235255, overlap 235248 GGGCGCCATGAAAAA GAACA TCTGC CGTTC GCTGGCAGCGCCTTC Ajs_0217 234952 - 235287 + | ferredoxin Ajs_0218 235310 - 236221 + | catechol 2,3-dioxygenase TERM 219 236355 - 236397 + G 78 -6.1 -4.62783 | gap 1, overlap 236343 236356 CGTGGCCGTGACCGA TGCCTCGGGCGTGCTGGCGG CCTT CCTGC-GCATGCCGGGGGCG TTTTTGCACTCGGTG TERM 220 236524 - 236536 + G 77 -6.9 -4.57073 | opp_overlap 236497, overlap 236493 GGCATGCCCGTGCGC CCGCG CAA CGTGG TTTTTGGCGGCGGTC Ajs_0219 236236 - 236667 + | hypothetical protein TERM 221 237747 - 237731 - g 81 -5.1 -4.77036 | opp_overlap 237738, overlap 237734 237735 GCTGATCAGCAAAAA GCACC AGGCCAA GGTGC TGGGCTTGTACAAAA TERM 222 237799 - 237763 - g 75 -7.1 -4.36914 | overlap 237765 237773 237777 TGGGCTTGTACAAAA CTGCCAAGGACGAAGGC GCC ACCATCGTCACCGGCGG CGGCATCCCCGACAT Ajs_0220 236730 - 238190 + | betaine-aldehyde dehydrogenase TERM 223 238200 - 238232 + F 80 -16.5 -2.62983 | opp_overlap 238198 238197 TTCTAAGCCAAATCG GCTTCTTGCGCTT TCTGGAT AAGCGCAAGAAGC TCCTATAAAAATAGC Ajs_0221 238264 - 239124 + | alpha/beta hydrolase fold TERM 224 239368 - 239353 - g 90 -3.2 -5.40072 | TGGTGGGCAAAAAAA TTGGCG TGAC CTCCAA GGCCGTGATGGACAT TERM 225 239754 - 239735 - g 85 -7.8 -4.82901 | GGTGCTGGAGAAAAA CGGCGACA TCGT TGCCACCG GCGCGGGCGCCGCAG Ajs_0222 239166 - 239954 + | 4-oxalocrotonate decarboxylase TERM 226 239996 - 239982 - g 79 -2.1 -5.1101 | CCATGACCCAAAAAA TCAAG TGCGC CCTGA TCGGCCCCGGCAACA TERM 227 240535 - 240521 - g 77 -5.6 -4.65895 | overlap 240522 GGTGCCATCGAAAAA GTGGGC GGC GCCCAG AAGGGCAAGGCCATC Ajs_0223 239969 - 240877 + | acetaldehyde dehydrogenase Ajs_0224 240899 - 241927 + | 4-hydroxy-2-ketovalerate aldolase TERM 228 242545 - 242511 - g 85 -9.9 -4.17048 | CGTGCTGGAAAAGAA CGGTGAGC-CCGTCGCC CTG GGCGCCGGCGC-CGCCG TGCTGGGCCACCCGG TERM 229 242703 - 242721 + G 70 -10.2 -3.64703 | GCGCGTGCAGGGCAT GGGCAGCG TCT CGCTGCGC TTTGCCTGAGGGGCC Ajs_0225 241942 - 242730 + | 4-oxalocrotonate decarboxylase TERM 230 242731 - 242746 + F 93 -7.5 -5.14563 | CTGCGCTTTGCCTGA GGGGC CGCGTC GCCCC TTTTTTGATGCAACC TERM 231 243048 - 242994 - g 76 -8.3 -4.17048 | gap 2, overlap 242995 CGTGGTGGAAAACAA GGCCGGCGCGGGC--GGCAACATCGGC ACC GACGCGGTGGCCAAGGCCGCGCCGGAC GGCTACACCCTAGGC TERM 232 243516 - 243531 + G 70 -8.2 -3.96148 | GCCCACGGTGGCCGA GTCCGG TTAC CCGGGC TTTGTCGTGGAAAAC Ajs_0226 242785 - 243768 + | hypothetical protein Ajs_0227 243788 - 243979 + | 4-oxalocrotonate tautomerase TERM 233 244033 - 243997 - T 100 -19 -4.56597 | opp_overlap 243992 244002 CTCTTGCGGCAAAAA TAGCATTCAGCGCTTA TCCAG CAAGCGCTGAATGCTA TCAGGTTGATAGTGG Ajs_0228 244693 - 244055 - | beta-lactamase domain-containing protein TERM 234 244796 - 244753 - R 95 -10.4 -4.65895 | gap 1, opp_overlap 244756 244757 244758, overlap 244756 244758 244780 TTGCTTATTCAAAAA CAATA-GCTGCCAGCGCTTGT TAA ACAAGCGCTGGAGGCATATTT CATGCAAAACGCATG TERM 235 244756 - 244793 + r 88 -14.3 -3.72576 | gap 1, opp_overlap 244753 244756 244758 244780, overlap 244757 244758 CTTATTCAAAAACAA TA-GCTGCCAGCGCTTGT TAA ACAAGCGCTGGAGGCATA TTTCATGCAAAACGC TERM 236 244793 - 244756 - R 100 -12.1 -4.44608 | gap 1, opp_overlap 244756 244757 244758, overlap 244753 244758 244780 CTTATTCAAAAACAA TA-GCTGCCAGCGCTTGT TAA ACAAGCGCTGGAGGCATA TTTCATGCAAAACGC TERM 237 244757 - 244791 + r 83 -15 -3.44848 | opp_overlap 244756 244753 244758 244780, overlap 244756 244758 TTATTCAAAAACAAT AGCTGCCAGCGCTTGT TAA ACAAGCGCTGGAGGCA TATTTCATGCAAAAC TERM 238 244790 - 244758 - R 95 -16.3 -3.82353 | opp_overlap 244757 244756 244758, overlap 244756 244753 244780 TATTCAAAAACAATA GCTGCCAGCGCTTGT TAA ACAAGCGCTGGAGGC ATATTTCATGCAAAA TERM 239 244758 - 244790 + r 86 -18.5 -2.66695 | opp_overlap 244758 244756 244753 244780, overlap 244757 244756 TATTCAAAAACAATA GCTGCCAGCGCTTGT TAA ACAAGCGCTGGAGGC ATATTTCATGCAAAA TERM 240 244828 - 244780 - R 71 -8.7 -3.90744 | opp_overlap 244758 244757 244756, overlap 244758 244756 244753 GCGCTTGTTAAACAA GCGCTGGAGGCATATTTCATGCA AAA CGCATGTCGTCCGCCTGCAGCGC GGGTGCGATGGCCTC Ajs_0229 245494 - 244796 - | GntR family transcriptional regulator TERM 241 245579 - 245597 + H 74 -12.4 -3.51232 | overlap 245573 AATATCATCTGCAAC GCGCCAGG CGT TCTGGCGC TTCATTTCAAAGAGG TERM 242 245792 - 245847 + G 71 -12.7 -3.34398 | gap 3, overlap 245791 GGGGCTGCTCACGCC CCAC-GCCTCGCGCGACATG-GGCGGGC TGG GGCTGTCGCATGTCGC-CAAGGCCGTGG TGTTTGAAGAGGCGG TERM 243 245998 - 245958 - g 79 -7.4 -4.56775 | gap 1, opp_overlap 245957 245954 ACGCCCGCGCAAAAA GAGCGCTGGCTGCGCGGCC AGGT GGCGGGGCAGTG-GCGCTC ATGCTTTGCCATGAC Ajs_0230 245619 - 246818 + | acyl-CoA dehydrogenase domain-containing protein TERM 244 247012 - 247060 + G 73 -13.9 -3.11634 | CGCAGGCGGCCAGGC GCGGGCCTGCGCGCTGGACG-TG ACCGA CAGCG-CCAGCGTGCGCGCCTGC TTCGATGATCTGGCC Ajs_0231 246821 - 247597 + | short-chain dehydrogenase/reductase SDR Ajs_0232 247594 - 248634 + | aminoglycoside phosphotransferase TERM 245 248722 - 248707 - T 73 -8.2 -4.0896 | opp_overlap 248719, overlap 248679 AAAGCGCGTGGAAAA CGCCGA ACAC CCGGCG CGAATAGCTCCTGAA Ajs_0233 249542 - 248739 - | exodeoxyribonuclease III Xth pyrE 249553 - 250263 + | orotate phosphoribosyltransferase TERM 246 250447 - 250426 - g 73 -6.5 -4.42386 | gap 1, overlap 250427 CCTGTATCGACAAAA CCGGCAGGCG CAT CACC-GCCGA CCGCCCCATCGCCGA TERM 247 250901 - 250883 - g 72 -5.2 -4.32034 | GCAGGACCAGGAAAA GCGCCG CATCCAC CAGCGC TTCGACGCCGAACTG Ajs_0235 250296 - 251012 + | hypothetical protein TERM 248 251027 - 251048 + T 93 -8.7 -5.1675 | opp_overlap 251030, overlap 251030 AGACGGCACACAAAA AAAGGCTCC ACCG GGAGCCTTC TTTTTTGATAGCTGC TERM 249 251045 - 251030 - T 100 -10.4 -5.71712 | opp_overlap 251027 251030 CGGCACACAAAAAAA GGCTCC ACCG GGAGCC TTCTTTTTTGATAGC TERM 250 251030 - 251045 + T 100 -10.4 -4.67552 | opp_overlap 251030, overlap 251027 CGGCACACAAAAAAA GGCTCC ACCG GGAGCC TTCTTTTTTGATAGC Ajs_0236 252543 - 251086 - | aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B TERM 251 251622 - 251606 - G 73 -10.8 -3.72893 | TACTGCTGCACGAAA CGCGCG GCCAT CGCGCG CGGCAGCTCGGGCAT Ajs_0237 254048 - 252546 - | aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A TERM 252 252945 - 252975 + g 81 -12.7 -3.83568 | gap 2 CATGATGCGGCGCTT GACCTCGTCGCCGAA GCC TTCGGCG-CG-GGTC TTCTTGTACATGTCC Ajs_0238 254427 - 254059 - | aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C Ajs_0239 254564 - 255607 + | rod shape-determining protein MreB TERM 253 255717 - 255732 + G 100 -10.4 -4.77036 | CCGCCTCACCCTCTA CAGCGC CCTG GCGCTG TTTTTGATGGTGGCG TERM 254 256001 - 255966 - g 73 -13.2 -3.28712 | gap 1, opp_overlap 255989 GCTGCTGCGCGAGAA CGC-CGAGCTGCGCCAG TTG CTGGCACTGCGCGAGCG CCTGACCACCGAGGC Ajs_0240 255637 - 256554 + | rod shape-determining protein MreC Ajs_0241 256551 - 257072 + | putative rod shape-determining MreD transmembrane protein TERM 255 257453 - 257474 + G 70 -10.1 -3.6682 | overlap 257454 GCGCCGCTTCAAGCG TCTGCGCGA GGAG TCGCGCAGC TTTGACTCCCTGCCC Ajs_0242 257100 - 259040 + | peptidoglycan glycosyltransferase Ajs_0243 259956 - 259057 - | hypothetical protein TERM 256 259431 - 259473 + g 100 -21.2 -3.14931 | opp_overlap 259410 CCTGCACCGCCGCCA TGCGTGTGGCGCGCAGCGGC TGG GCCGCGGTGCGGCGCGCGCA TTCCTCCAGCGTGAG TERM 257 260027 - 259998 - R 85 -10.1 -4.25104 | opp_overlap 259990 GCGCTTGTATCAAAA GGATTTCGATATG TTTT CATGTCGAAACCC AAGTACATCAAGCGC Ajs_0244 260841 - 260089 - | ABC transporter related Ajs_0245 261620 - 260838 - | polar amino acid ABC transporter, inner membrane subunit TERM 258 261596 - 261546 - G 78 -16 -3.15861 | overlap 261553 GACCAGCGCCATCAA CACCAAAGCCGCCACCAGCGTTGC ATT GCTGCGCTGGGTGCGGCTCCAGTG TGCGGGCCAGAGAGC TERM 259 261589 - 261553 - G 84 -13.5 -3.95022 | overlap 261546 GCCATCAACACCAAA GCCGCCACCAGCGTTGC ATT GCTGCGCTGGGTGCGGC TCCAGTGTGCGGGCC Ajs_0246 262421 - 261660 - | extracellular solute-binding protein TERM 260 262479 - 262454 - R 100 -10.5 -5.28176 | gap 1, overlap 262474 TTCAGGTACAAAAAA TCCGGCATTGCG GAT CACAA-GCCGGA AACCAACGCCTGCGC Ajs_0247 263507 - 262587 - | arginase Ajs_0248 264303 - 263545 - | hypothetical protein TERM 261 264426 - 264406 - R 100 -14 -5.38054 | opp_overlap 264406 CTCGACAAATAAAAA GGCACCCG GGTTG CGGGTGCC TTGTGAAGGGGCGTC TERM 262 264406 - 264426 + r 77 -14 -3.28924 | opp_overlap 264406 CTCGACAAATAAAAA GGCACCCG GGTTG CGGGTGCC TTGTGAAGGGGCGTC TERM 263 264571 - 264555 - R 76 -5.8 -4.65916 | opp_overlap 264555 264556, overlap 264556 TGGACTGTAATAAAA CGCACC CCGTT GGTGCA TTGGTGGTTTCCCGC Ajs_0249 266312 - 264603 - | glucose-methanol-choline oxidoreductase TERM 264 266607 - 266574 - H 71 -5.7 -4.28254 | opp_overlap 266582 266585 266585 CCGGAATATGCAAAA CTGCGGGTGCCGCCA GTGG CGCCGGCGCCAGCCG GTCGCCCGGCCTCTT Ajs_0250 266634 - 267752 + | hypothetical protein TERM 265 267795 - 267839 + G 72 -14.2 -3.01924 | ACGCCGACACCCGGG CCGTGGTTGAGCCGCCGGTG GTGGA CATCCGCGGCCTGGCCACGG TGTTCGGCCGGGGTG Ajs_0251 267755 - 268597 + | ABC transporter related TERM 266 269470 - 269421 - g 76 -14.9 -3.14132 | gap 1, overlap 269438 GCTGCCGCGCATCAA CCATGCGGCCGACGAAACCGCGCG CGC CGCGCGCCGCC-TGGGCCGCACGG CCTCGGGCATCAACG TERM 267 269456 - 269438 - g 75 -11.6 -3.72695 | overlap 269421 ATGCGGCCGACGAAA CCGCGCGC GCC GCGCGCCG CCTGGGCCGCACGGC Ajs_0252 268597 - 269574 + | hypothetical protein TERM 268 269648 - 269609 - g 79 -4.4 -4.78107 | gap 1, opp_overlap 269609 269611, overlap 269611 269613 GATGACTATCAAAAA GATAGCTGCTAGCGCTTAT CAG ATAAGCGCTAAG-GCCATA TTTTGCTTAGCATCC Ajs_0253 269592 - 270269 + | putative lipoprotein TERM 269 270294 - 270314 + F 100 -14.1 -5.75342 | opp_overlap 270298 CCCTTCCCACCCCCA GAGACATGC TGC GCATGTCTC TTTTTTTTGCCCGCC Ajs_0254 270514 - 270729 + | CsbD family protein TERM 270 271132 - 271109 - g 79 -3.6 -4.8622 | overlap 271110 271123 GTGGCCAAGGAAAAA TGCGACGACC AGAA GGGCGACGCC AAGGACATTTGCGTG Ajs_0255 270806 - 271384 + | hypothetical protein TERM 271 271402 - 271420 + F 100 -17.4 -5.60993 | opp_overlap 271397 271394 CGGCAAACATGTGCA GCCCCGCC TCT GGCGGGGC TTTTTTTGTCCCCCA TERM 272 271466 - 271478 + F 100 -10.5 -5.08601 | opp_overlap 271466, overlap 271432 TGACATGTGTCAATA CCGCC GGT GGCGG TTTTTCTTAAGCTCG Ajs_0256 271533 - 272039 + | hemerythrin-like metal-binding protein Ajs_0257 272219 - 273151 + | diguanylate cyclase with PAS/PAC sensor Ajs_0258 273793 - 273155 - | multiple antibiotic resistance (MarC)-related proteins Ajs_0259 274539 - 273793 - | short-chain dehydrogenase/reductase SDR Ajs_0260 274647 - 275336 + | carboxymethylenebutenolidase TERM 273 275388 - 275352 - T 100 -14.5 -4.62471 | opp_overlap 275352 275354, overlap 275355 AATTTATAGAGAAAA TCACTGCTAGCGCCCAC CTG GTAAGCGCTAGCAGCTA GATTATTGATAGCGT TERM 274 275385 - 275355 - T 91 -18.4 -3.24281 | opp_overlap 275354 275352, overlap 275352 TTATAGAGAAAATCA CTGCTAGCGCCCAC CTG GTAAGCGCTAGCAG CTAGATTATTGATAG Ajs_0261 276992 - 275424 - | EmrB/QacA family drug resistance transporter Ajs_0262 278220 - 277003 - | secretion protein HlyD family protein TERM 275 277814 - 277856 + g 73 -12.8 -3.40611 | gap 3, overlap 277815 TCGGCCTGGGCGCGT GCGGCCTCGGCCTCGCGCAGG CGCA CCTGCGCG-G-CC-AGGGCGC TGTTGTTGGCGTACA Ajs_0263 279802 - 278249 - | RND efflux system outer membrane lipoprotein Ajs_0264 280376 - 279861 - | MarR family transcriptional regulator TERM 276 280444 - 280427 - R 88 -6.3 -5.14626 | gap 1, overlap 280413 280442 AGCAGGAAAACAAAA CCCT-GCT GGA AGCCAGGG CGGCGTGGCCGTGCA Ajs_0265 281685 - 280480 - | Mg2+ transporter protein, CorA family protein TERM 277 281758 - 281741 - R 71 -9.1 -3.72893 | gap 1 TATTTTGCGAGCAAA CGCGC-GG CGT CCAGCGCG AAGTAGGTCAGCACG Ajs_0266 282732 - 281725 - | delta-aminolevulinic acid dehydratase Ajs_0267 282893 - 283606 + | biotin/lipoate A/B protein ligase TERM 278 283695 - 283719 + F 90 -13.5 -4.08064 | overlap 283710 ACCTCCCTGAGCGGG CCCCGCTGCCT GCG ACGCGGCGGGG TTTTCCGCCCGGATT TERM 279 283725 - 283742 + F 100 -8.3 -5.48825 | overlap 283710 283726 CGCGGCGGGGTTTTC CGCCCGG ATTT CCGGGCA TTTTTTTGCCTCGTG TERM 280 283726 - 283741 + F 81 -11.8 -3.8821 | overlap 283710 283725 GCGGCGGGGTTTTCC GCCCGG ATTT CCGGGC ATTTTTTTGCCTCGT Ajs_0268 283816 - 284244 + | hypothetical protein Ajs_0269 284342 - 285439 + | VanZ family protein TERM 281 285550 - 285523 - g 71 -12.8 -3.33737 | gap 1, opp_overlap 285521, overlap 285515 CACGAACGGCGAGAA CTGCTGCGC-CCA CCA TGGCGCACAGCAG GCGTTTGACCGCTGC Ajs_0270 285449 - 285790 + | ferredoxin-like protein TERM 282 286406 - 286454 + G 83 -9.4 -4.41348 | gap 1, overlap 286407 286411 CCGCTGTGATGGATT GGGCGCGCCCGCAGACACTGCCG GTTA CGGTTGTGCCTGGGGGCG-GTCA TTTCTTTCACGGACA TERM 283 286407 - 286453 + G 73 -12.9 -3.24488 | gap 1, overlap 286406 286411 CGCTGTGATGGATTG GGCGCGCCCGCAGACACTGCCG GTTA CGGTTGTGCCTGGGGGCG-GTC ATTTCTTTCACGGAC TERM 284 286411 - 286450 + G 73 -15.6 -2.50589 | overlap 286407 286406 GTGATGGATTGGGCG CGCCCGCAGACACTGCCG GTTA CGGTTGTGCCTGGGGGCG GTCATTTCTTTCACG Ajs_0271 285862 - 286521 + | putative transmembrane protein TERM 285 286542 - 286565 + F 76 -8 -4.33851 | overlap 286543 CGGCACCATTTCTCT TGTCCCGGCC ATGC GGTCGGGCCG TTTCTTCTCCCGTTT Ajs_0272 286601 - 287764 + | penicillin-binding protein 6 rpsL 287915 - 288292 + | 30S ribosomal protein S12 TERM 286 288301 - 288277 - f 73 -11.4 -3.62046 | opp_overlap 288277 288276 GTACGGCGCGAAGAA GCCCAAGGCC AAGTA AGCCCTGGGC CTTTCGGTCTGAGAT Ajs_0274 288463 - 288936 + | 30S ribosomal protein S7 TERM 287 288975 - 289013 + F 77 -13.9 -3.34013 | gap 1, opp_overlap 288979 289000, overlap 288977 288979 289000 CACCTCGGTACACGA TAAAGGCCGCTGACGTGC TGAA GCACG-CGGCGGCCTGTG TTGATTGAGGCCCTG TERM 288 288977 - 289011 + F 80 -14.3 -3.23853 | gap 1, opp_overlap 288979 289000, overlap 288975 288979 289000 CCTCGGTACACGATA AAGGCCGCTGACGTGC TGAA GCACG-CGGCGGCCTG TGTTGATTGAGGCCC TERM 289 289009 - 288979 - f 93 -14.7 -4.0162 | gap 1, opp_overlap 288977 288975 288979 289000, overlap 289000 TCGGTACACGATAAA GGCCGCTGACGTGC TGAA GCACG-CGGCGGCC TGTGTTGATTGAGGC TERM 290 288979 - 289009 + F 89 -16.9 -3.18366 | gap 1, opp_overlap 288979 289000, overlap 288977 288975 289000 TCGGTACACGATAAA GGCCGCTGACGTGC TGAA GCACG-CGGCGGCC TGTGTTGATTGAGGC TERM 291 290397 - 290385 - g 86 -4.7 -5.1861 | overlap 290386 CTGACCAGGAAAAAA TGGGC ATT GCCCT GTCGCGCCTGGCCTC Ajs_0275 289094 - 291202 + | translation elongation factor 2 (EF-2/EF-G) TERM 292 291223 - 291259 + F 83 -13.1 -3.89695 | opp_overlap 291223 GCATGTAAGCCAAAA GAGCTGTTAGCGCTTAT CTG ATAGGCGATGGCAGCTC TTGTATTTATAGCAA TERM 293 291259 - 291223 - f 73 -6.5 -4.28774 | opp_overlap 291223 GCATGTAAGCCAAAA GAGCTGTTAGCGCTTAT CTG ATAGGCGATGGCAGCTC TTGTATTTATAGCAA TERM 294 292536 - 292506 - g 70 -9.8 -3.67775 | gap 2, opp_overlap 292526 ATCGCCATGGAAGAA GGCCTGCGCTTCGC TATCC GCGAAG-GC-GGCC GTACCGTGGGCGCCG Ajs_0276 291387 - 292577 + | elongation factor Tu rpsJ 292605 - 292916 + | 30S ribosomal protein S10 TERM 295 292972 - 293000 + F 81 -14 -3.60419 | gap 1, overlap 292944 ACCGGGCGCCCCCAA CGCGGACTTGCTT GTAA AAGCA-GTCCGCG TTATAATTTGCGGCT Ajs_0278 293167 - 293841 + | 50S ribosomal protein L3P TERM 296 294140 - 294128 - g 78 -6.3 -4.63218 | overlap 294130 CCTGCCTGAAGAAAA CTTCT CGC AGAAG ATCAACAAGAAGATG rplD 293841 - 294461 + | 50S ribosomal protein L4 Ajs_0280 294458 - 294772 + | 50S ribosomal protein L23P rplB 294776 - 295600 + | 50S ribosomal protein L2 Ajs_0282 295611 - 295889 + | SSU ribosomal protein S19P Ajs_0283 295899 - 296231 + | 50S ribosomal protein L22P rpsC 296248 - 297114 + | 30S ribosomal protein S3 rplP 297117 - 297533 + | 50S ribosomal protein L16 Ajs_0286 297545 - 297742 + | 50S ribosomal protein L29P Ajs_0287 297752 - 298021 + | SSU ribosomal protein S17P TERM 297 298051 - 298081 + F 100 -19.2 -4.56597 | opp_overlap 298057, overlap 298057 CGTCTGCGCGCCTCC GAGAAACGACCCAC AAT GTGGGTCGTTTTTC TTTTTGGGGCCCGCA TERM 298 298075 - 298057 - f 89 -14.6 -3.85698 | opp_overlap 298057 298051 CGCGCCTCCGAGAAA CGACCCAC AAT GTGGGTCG TTTTTCTTTTTGGGG TERM 299 298057 - 298075 + F 100 -14.6 -5.61881 | opp_overlap 298057, overlap 298051 CGCGCCTCCGAGAAA CGACCCAC AAT GTGGGTCG TTTTTCTTTTTGGGG Ajs_0288 298085 - 298642 + | redoxin domain-containing protein TERM 300 298700 - 298726 + T 73 -8.7 -4.04415 | gap 1, opp_overlap 298699 298700, overlap 298723 CGCCGCAGGCGAAAC GCCGCCC-CGTC GCGA GATGCGGGTGGC TTTGCTATTATTTGA Ajs_0289 299301 - 298786 - | GCN5-related N-acetyltransferase TERM 301 299382 - 299350 - R 76 -6.1 -4.65895 | GTGGGCACTCAAAAA GCCCCCAGGCTGGCG ACC CACCAGGCCAGCAGC GCGCTCAGAGCCGCC Ajs_0290 300011 - 299343 - | cytochrome B561 TERM 302 299548 - 299525 - G 72 -5.2 -4.38141 | gap 1, overlap 299526 GGGTATAGAAAACAA TCGCCGC-CAG GTG CAGCGCGACGA GCCCCAACAGCAGGA Ajs_0291 300192 - 300653 + | cytochrome c, class II TERM 303 300698 - 300731 + T 93 -18.4 -3.28924 | opp_overlap 300702 300723, overlap 300702 TTGCTGCATAAGCGC GAAAGGCCGATTTC GTTCAG GAAATCGGCCTTTC TTCTGAAGAAAGGTG TERM 304 300727 - 300702 - T 81 -13.4 -3.62591 | opp_overlap 300702 300698, overlap 300723 TGCATAAGCGCGAAA GGCCGATTTC GTTCAG GAAATCGGCC TTTCTTCTGAAGAAA TERM 305 300702 - 300727 + T 100 -13.4 -4.30719 | opp_overlap 300702 300723, overlap 300698 TGCATAAGCGCGAAA GGCCGATTTC GTTCAG GAAATCGGCC TTTCTTCTGAAGAAA Ajs_0292 301252 - 300749 - | redoxin domain-containing protein Ajs_0293 301505 - 302068 + | hypothetical protein TERM 306 302509 - 302562 + G 77 -11 -3.7941 | overlap 302510 GGTTCGCTGGGCATG GTGGCGTCCACGCTGCCGGT-GCAGT GGCT GCTGCCACTGGCAGGGTGG-CGCCCG TTGTTCTGGGGGCTG TERM 307 302510 - 302561 + G 73 -14.5 -2.87325 | overlap 302509 GTTCGCTGGGCATGG TGGCGTCCACGCTGCCGGT-GCAGT GGCT GCTGCCACTGGCAGGGTGG-CGCCC GTTGTTCTGGGGGCT Ajs_0294 302065 - 303303 + | major facilitator superfamily transporter Ajs_0295 303300 - 303749 + | PTS system fructose subfamily IIA component Ajs_0296 303718 - 303987 + | phosphotransferase system, phosphocarrier protein HPr TERM 308 304470 - 304512 + G 78 -15.7 -3.21099 | gap 2 CGTCGCGCCGCCGCC CTCTGCC-CCGCGCC-GCC AGGCCGA GGCGGGTGCGGAGGCAGAG TTCCTGCTGGGCGGC TERM 309 304523 - 304543 + G 70 -11.8 -3.44051 | CAGAGTTCCTGCTGG GCGGCGCG GCCGA TGCGCCGC TTGTGCTGGTGGCGC TERM 310 304961 - 304971 + G 89 -5.4 -5.1356 | CGGGCGTGGGGCTGT TTCG CAG CGAA TTTTTGTTCATGGGC TERM 311 305688 - 305731 + G 84 -17.4 -3.08679 | gap 1, opp_overlap 305682 CGTCAAGCAGGAGGT GCTGC-GCGCCGACGCGCGCA AGC TGGGCGAGTGGGCGCAGCAGC TGTTGGATGCGGACG Ajs_0297 304006 - 305775 + | phosphoenolpyruvate--protein phosphotransferase Ajs_0298 306827 - 305847 - | lipoyl synthase Ajs_0299 307525 - 306845 - | lipoate-protein ligase B TERM 312 307058 - 307108 + g 74 -5.3 -4.57073 | gap 2, overlap 307060 GCCCAGCGCGGCGAT CTTGCCCAAGCCGGTGAAGTCCGGC TGG GGTGGGC--CGTCGGCGTGGGCACG TTTTTGCGGGCGCTG Ajs_0300 307845 - 307549 - | hypothetical protein Ajs_0301 308086 - 308574 + | putative ATP synthase protein I Ajs_0302 308597 - 309460 + | F0F1 ATP synthase subunit A Ajs_0303 309512 - 309760 + | F0F1 ATP synthase subunit C Ajs_0304 309796 - 310266 + | F0F1 ATP synthase subunit B Ajs_0305 310278 - 310820 + | F0F1 ATP synthase subunit delta TERM 313 312298 - 312270 - g 70 -10.1 -3.65046 | CGTGGACGTGAAGAA GGTGCTGGCCTTC GAA GCCGGCCTGCACC AGTACCTGAAGACGA Ajs_0306 310867 - 312426 + | F0F1 ATP synthase subunit alpha Ajs_0307 312445 - 313311 + | ATP synthase F1, gamma subunit Ajs_0308 313354 - 314760 + | F0F1 ATP synthase subunit beta Ajs_0309 314836 - 315252 + | F0F1 ATP synthase subunit epsilon TERM 314 315272 - 315302 + F 88 -16.3 -3.35679 | gap 1, opp_overlap 315279, overlap 315274 315279 CTGATCGCCTTTCAT CG-CAAAAGCCGCC TTCG GGCGGCTTTTGTCG TTATGGGTGGGCCCG TERM 315 315274 - 315299 + F 90 -17.7 -2.8474 | opp_overlap 315279, overlap 315272 315279 GATCGCCTTTCATCG CAAAAGCCGCC TTCG GGCGGCTTTTG TCGTTATGGGTGGGC TERM 316 315279 - 315294 + F 100 -11.8 -4.58466 | opp_overlap 315279, overlap 315274 315272 CCTTTCATCGCAAAA GCCGCC TTCG GGCGGC TTTTGTCGTTATGGG TERM 317 315294 - 315279 - f 86 -11.8 -4.13767 | opp_overlap 315279 315274 315272 CCTTTCATCGCAAAA GCCGCC TTCG GGCGGC TTTTGTCGTTATGGG Ajs_0310 315383 - 316483 + | putative mRNA 3-end processing factor TERM 318 316680 - 316624 - g 78 -14.3 -3.53012 | gap 1 CTCGCGGGTGGCAAA CCACGCCAACTCGTGC-CCACCAAGC TGCTGC GCGCGGTGGCGCGCGAGGCGGCGGGG TTGCCGGAATGGCTG Ajs_0311 316483 - 318162 + | ATP-dependent DNA ligase TERM 319 319875 - 319896 + G 70 -11.5 -3.45768 | overlap 319882 TGGAAGAGGGCTTCA TCGCGCGGC TGTC GCCGGGCGA TTGCTTCGTGTTCGC Ajs_0312 318254 - 321166 + | DEAD/DEAH box helicase domain-containing protein TERM 320 321566 - 321529 - g 75 -15.5 -2.70932 | gap 1 GGTGCGCGGCAACCA CGACC-GCCACGCGGGCG ACC CACCGGCGTGGCTGGGCG CGCGCATCGTGGAGG Ajs_0313 321170 - 321844 + | metallophosphoesterase Ajs_0314 322444 - 321893 - | hypothetical protein Ajs_0315 323372 - 322470 - | hypothetical protein Ajs_0316 323999 - 323394 - | LemA family protein Ajs_0317 324144 - 324593 + | hypothetical protein TERM 321 324826 - 324864 + G 78 -15.3 -3.09327 | overlap 324829 ACTTCCTGCGGCCGT GTGCC-GCGGCGGGCGCGG CCC CCGCGCC-GCTGCTGGTGC TGTTCCATGGACTGG TERM 322 324829 - 324861 + G 75 -15.6 -2.75992 | overlap 324826 TCCTGCGGCCGTGTG CC-GCGGCGGGCGCGG CCC CCGCGCC-GCTGCTGG TGCTGTTCCATGGAC Ajs_0318 324666 - 325670 + | alpha/beta hydrolase fold Ajs_0319 325711 - 326250 + | hypothetical protein TERM 323 326310 - 326288 - T 85 -14.9 -3.6053 | opp_overlap 326291, overlap 326291 CCGTCCAGAAACCAA CAAGCCGGC ACGCG GCCGGCTTG TGACGAGGCGAAAAG TERM 324 326307 - 326291 - T 79 -10.8 -3.93401 | opp_overlap 326291, overlap 326288 TCCAGAAACCAACAA GCCGGC ACGCG GCCGGC TTGTGACGAGGCGAA Ajs_0320 326872 - 326330 - | cytochrome c, class I TERM 325 326720 - 326738 + g 71 -12.4 -3.30124 | overlap 326723 CAGTTCGGGGTTGGC GGAGCCGG CCG CCGGCTTC TTGTCGGCCGTGACG TERM 326 326723 - 326735 + g 74 -10.5 -3.7941 | overlap 326720 TTCGGGGTTGGCGGA GCCGG CCG CCGGC TTCTTGTCGGCCGTG TERM 327 326980 - 326967 - R 81 -3.7 -5.00616 | opp_overlap 326933 CCGTTGGGGAAAAAA CGGGC AGGC GCGCG TCGTGACCTATGTCA Ajs_0321 328435 - 326993 - | RND efflux system outer membrane lipoprotein TERM 328 327509 - 327491 - G 77 -7.3 -4.57073 | opp_overlap 327492, overlap 327492 327493 GATGCGCGGGAAAAA CGCCGCG CGCGC CGCGCCG ATGTTGGCGTTGGCG TERM 329 327665 - 327692 + g 74 -7.6 -4.2558 | gap 1, overlap 327664 GATGTCGTCGGGCAG CG-GCTGGCCCAG TAG CAGGACCAGCGCG TTTTCATCGAGCATG TERM 330 328992 - 328979 - R 74 -2.3 -4.87665 | overlap 328982 CGCCAGGCACAAAAA CACCG CCAG CAGCG CGAACGCATACAGCA TERM 331 329014 - 329029 + r 78 -4.7 -4.72272 | opp_overlap 329005 CATACAGCACGAGGG CTTGC GAGCCG GCAAG TTTTTCCTCGCGGGA TERM 332 329819 - 329786 - R 76 -6.7 -4.49389 | gap 1, opp_overlap 329786 ACCCGAGAACGAAAA GCCCGAAACG-GTGAC GAT GTCGCGCACTTCAGGC TGTTTGAGCATGAAC TERM 333 331257 - 331288 + r 76 -8.5 -4.11216 | GCTGGGTGACGGCCG CCGGCAGGCGCGG CGTGGC CCGCGACAGGCGG TTTTGCACATCCACC TERM 334 331353 - 331405 + r 88 -16.4 -3.26471 | gap 2 TCAGCACGATGGTGC CGGTGCCGTTGGCCTGG-CTG-GTGG TCT CCATGTAGGCCAGGCCGGTGGCGCCG TTCATCTCGCGCTCG Ajs_0323 332934 - 331633 - | RND family efflux transporter MFP subunit Ajs_0324 333098 - 333709 + | TetR family transcriptional regulator Ajs_0325 334849 - 334076 - | regulatory proteins, IclR TERM 335 335204 - 335182 - H 74 -12.7 -3.32402 | gap 1, opp_overlap 335188, overlap 335180 335178 335183 CCCACATTAAAGAGA GCC-GCCGGG CTTG CCCGGCAGGC CGTTGGTCGGCGGCA Ajs_0326 335273 - 336499 + | transposase IS116/IS110/IS902 family protein TERM 336 336588 - 336631 + F 89 -16.3 -3.524 | gap 1, opp_overlap 336588 336595, overlap 336590 336595 TTCCACATTAAGCGA TACAAAAGGACAGCGGCTCC GTGCA GGAGCT-CTGTCCTTTTGTG TTCTATACCTGACTC TERM 337 336590 - 336629 + F 88 -16.7 -3.33525 | gap 1, opp_overlap 336588 336595, overlap 336588 336595 CCACATTAAGCGATA CAAAAGGACAGCGGCTCC GTGCA GGAGCT-CTGTCCTTTTG TGTTCTATACCTGAC TERM 338 336595 - 336624 + F 100 -10.8 -4.76963 | gap 1, opp_overlap 336588 336595, overlap 336590 336588 TTAAGCGATACAAAA GGACAGCGGCTCC GTGCA GGAGCT-CTGTCC TTTTGTGTTCTATAC TERM 339 336624 - 336595 - f 86 -8.6 -4.57474 | gap 1, opp_overlap 336595 336590 336588, overlap 336588 TTAAGCGATACAAAA GGACAGCGGCTCC GTGCA GGAGCT-CTGTCC TTTTGTGTTCTATAC TERM 340 336647 - 336659 + F 100 -6.2 -5.40072 | TTCTATACCTGACTC GCCC GCGAG GGGC TTTTTTTGCGAGGAG TERM 341 336797 - 336807 + G 75 -4.6 -4.62069 | overlap 336765 336781 CCCGCAGGGCCCTGC TGCC GTG GGCG TTTTTGCCGTGCAGA Ajs_0327 336684 - 337814 + | RND family efflux transporter MFP subunit TERM 342 339326 - 339351 + G 70 -8.2 -3.98745 | gap 1, overlap 339328 339334 CCATCCTCAAGGCGC CCGTGCCGGGC AAAAA GCCCGCC-CGG TTCTTTGCCTGGTTC Ajs_0328 337825 - 340977 + | hydrophobe/amphiphile efflux-1 (HAE1) family protein TERM 343 342106 - 342093 - g 79 -4.5 -4.77036 | GCGCAGTACGAAAAA GCCAT CCAG ACGGC GTTCCGCGAAGTGGC TERM 344 342187 - 342175 - g 73 -9.1 -3.91911 | TGCAGGCTAACCAAA GCCTG GTG CAGGC CTCGGGCAAATACCT Ajs_0329 340974 - 342392 + | RND efflux system outer membrane lipoprotein Ajs_0330 342477 - 343154 + | HAD family hydrolase TERM 345 343269 - 343286 + F 100 -11.3 -5.4505 | GCGCCACATTCCCCA GCCCTTG TTCC CAAGGGC TTTTTTGTTCCCACC Ajs_0331 343428 - 343760 + | hypothetical protein Ajs_0332 343972 - 344433 + | hypothetical protein Ajs_0333 344497 - 344736 + | alcohol dehydrogenase Ajs_0334 345395 - 344886 - | putative outer membrane protein Ajs_0335 346289 - 345522 - | glutamine amidotransferase, class-II Ajs_0336 346511 - 346323 - | 4-oxalocrotonate tautomerase Ajs_0337 346771 - 346535 - | hypothetical protein TERM 346 346819 - 346790 - R 93 -16.5 -3.75665 | opp_overlap 346796, overlap 346791 346793 GGAGAGTGTACGAAA GCACAACGGCACC CGTG GGTGCCGTTGTGG TCAAAATGGCCCCTG TERM 347 346818 - 346791 - R 93 -20 -2.85078 | opp_overlap 346796, overlap 346790 346793 GAGAGTGTACGAAAG CACAACGGCACC CGTG GGTGCCGTTGTG GTCAAAATGGCCCCT TERM 348 346816 - 346793 - R 84 -16.8 -2.97171 | opp_overlap 346796, overlap 346791 346790 GAGTGTACGAAAGCA CAACGGCACC CGTG GGTGCCGTTG TGGTCAAAATGGCCC TERM 349 346796 - 346813 + r 76 -12.7 -3.41051 | opp_overlap 346793 346791 346790 TGTACGAAAGCACAA CGGCACC CGTG GGTGCCG TTGTGGTCAAAATGG Ajs_0338 349079 - 346878 - | malate synthase G TERM 350 347031 - 347046 + g 88 -10.4 -4.30576 | GTGCATGCGCTGGTA CAGCGG GTCG CCGCTG TTTTGCTGGTCCACC TERM 351 348011 - 348036 + g 71 -12.5 -3.21747 | CGGGAATTTCCTTGC CCTCGCCACCC CACA GGATGGCGGGG TTGGTCATCAGATGC TERM 352 349122 - 349108 - H 71 -5.6 -4.35524 | opp_overlap 349113 GCGGTAAATTGAAAA GCCGTG GCC CATGGC GGAGCCTTGCATGCC Ajs_0339 349308 - 350246 + | LysR family transcriptional regulator Ajs_0340 350338 - 350922 + | hypothetical protein Ajs_0341 350962 - 351417 + | putative transmembrane protein TERM 353 351473 - 351441 - T 100 -13.4 -5.47399 | opp_overlap 351445, overlap 351445 GGAAGGGCAAAAAAA GAAACCCCGCGGGC GGCAG GCGCGCGGGGTTTT CTCGTGCAGGCCCGA TERM 354 351445 - 351469 + T 100 -14.2 -4.46212 | opp_overlap 351441 351445 GGGCAAAAAAAGAAA CCCCGCGGGC GGCAG GCGCGCGGGG TTTTCTCGTGCAGGC TERM 355 351469 - 351445 - T 100 -14.2 -5.20328 | opp_overlap 351445, overlap 351441 GGGCAAAAAAAGAAA CCCCGCGGGC GGCAG GCGCGCGGGG TTTTCTCGTGCAGGC Ajs_0342 351850 - 351518 - | PsiF repeat-containing protein TERM 356 351921 - 351876 - H 75 -3.1 -4.86862 | gap 1, overlap 351878 351901 TGCAAAAAAGGAAAA GGTGAATGCGCCCGCCGGCAAC GCA GTGCCCCACGGGC-CACCCAGC ATAACGCCGGGCGGT argS 351946 - 353679 + | arginyl-tRNA synthetase Ajs_0344 353692 - 354318 + | sporulation domain-containing protein Ajs_0345 354377 - 355027 + | DSBA oxidoreductase TERM 357 355070 - 355053 - f 77 -14.1 -3.37796 | opp_overlap 355053 CGCCACCAGCGACAA GCGCGCC TACG GGCGCGC TTTTTTCATGCCTGC TERM 358 355053 - 355070 + F 100 -14.1 -5.1675 | opp_overlap 355053 CGCCACCAGCGACAA GCGCGCC TACG GGCGCGC TTTTTTCATGCCTGC Ajs_0346 355177 - 355860 + | OstA family protein TERM 359 356247 - 356189 - g 73 -10.8 -3.67498 | gap 2 CAATGTCGAAGACAA CGTGCGCGCGGTGCTGGAGCTGCAGACC GACGA GGCCGGCCGCTCCCTG-CCGCGCGC-CG AGGTGGAGCGGCGCC Ajs_0347 355869 - 356636 + | ABC transporter related TERM 360 357684 - 357668 - g 77 -5.7 -4.64676 | TGATCGTCAAGAAAA CCGGCCG CGG CGGACAG CAGAACTTCAGCGTG Ajs_0348 356689 - 358266 + | RNA polymerase, sigma 54 subunit, RpoN Ajs_0349 358270 - 358713 + | hypothetical protein Ajs_0350 358710 - 360032 + | putative RNA methylase Ajs_0351 360022 - 360507 + | hypothetical protein Ajs_0352 360495 - 361796 + | UDP-N-acetylglucosamine 1-carboxyvinyltransferase TERM 361 362062 - 362038 - f 70 -9.9 -3.67775 | opp_overlap 362038 362037, overlap 362025 362024 ATCGCCAGCCAATAA GGCTGGGTGGG CCG CCCAGACAGCC CTTTGTTACCGACCG TERM 362 362075 - 362111 + F 74 -5 -4.56775 | gap 1, overlap 362081 GCCCTTTGTTACCGA CCGCTGCGCCCCATTGC CTTG GCA-TGGGGCGTTTCTG TTTTTAAGGCCAAAT TERM 363 362081 - 362105 + F 100 -12.2 -4.55887 | gap 1, overlap 362075 TGTTACCGACCGCTG CGCCCCATTGC CTTG GCA-TGGGGCG TTTCTGTTTTTAAGG TERM 364 362205 - 362227 + F 71 -11.2 -3.52906 | opp_overlap 362180, overlap 362204 ACGACGTTACACTGC GCGCCTCAGG CCT CCTGGGGCCC TGTTTCTCCCCCTCC TERM 365 362840 - 362820 - g 80 -14.7 -3.44146 | CCGCGCGACAAGGAA GCCGCCCAG TGG CTGGACGGC GCGCTCGAATCCATC Ajs_0353 362277 - 363107 + | SecC motif-containing protein Ajs_0354 363862 - 363323 - | CinA domain-containing protein TERM 366 363405 - 363359 - G 78 -15.6 -3.14881 | CAACTGGGCCAGCAA CTGCGCCAGCCGCCCCAGCGCG TGG CGCACCGTGGCGGCGCGCACGG CGGCGCGGTCTCCGC TERM 367 363807 - 363846 + g 85 -7.9 -4.81083 | gap 1, opp_overlap 363807, overlap 363809 363810 363844 GAGATATGAATCAAA TCGGCCT-CCAGCGCTTG TCCAT CAAGCGCTGGCAGCTCTA TTTTTGATAGTTCCA TERM 368 363846 - 363807 - G 73 -9.3 -3.99353 | gap 1, opp_overlap 363807 363809 363810 363844 GAGATATGAATCAAA TCG-GCCTCCAGCGCTTG TCCAT CAAGCGCTGGCAGCTCTA TTTTTGATAGTTCCA TERM 369 363809 - 363844 + g 77 -10.5 -4.02049 | gap 1, opp_overlap 363807, overlap 363807 363810 GATATGAATCAAATC GGCCT-CCAGCGCTTG TCCAT CAAGCGCTGGCAGCTC TATTTTTGATAGTTC TERM 370 363810 - 363842 + g 77 -13.4 -3.58504 | opp_overlap 363807, overlap 363809 363807 ATATGAATCAAATCG GCCTCCAGCGCTTG TCCAT CAAGCGCTGGCAGC TCTATTTTTGATAGT Ajs_0355 364398 - 363868 - | phosphatidylglycerophosphatase Ajs_0356 365436 - 364462 - | thiamine-monophosphate kinase Ajs_0357 366576 - 365452 - | carboxylate-amine ligase Ajs_0358 367831 - 366566 - | sodium/hydrogen exchanger Ajs_0359 369995 - 368013 - | putative site-specific recombinase transmembrane protein TERM 371 368078 - 368043 - G 100 -16.8 -4.72272 | gap 1, overlap 368018 CGGGGGCAGGAAAAA GCCCAGC-GGCGCGCTG CGC CAGCGCGCCAGCAGCGC GCGGTAGATGCGCGC TERM 372 368410 - 368391 - G 79 -11.4 -3.85698 | gap 1, opp_overlap 368408 GTTGCCCCGCAGAAA GCG-CGCCC AGC GGGCGGCGC GTGCAGCACCCAGCA apaG 370405 - 369992 - | ApaG TERM 373 371105 - 371086 - g 73 -13.6 -3.33737 | CATCAAGGCCGACAA CATCCGCC GGGT GGCGGATG CGGGCGCGGACACGT Ajs_0361 370517 - 371197 + | ribulose-5-phosphate 3-epimerase Ajs_0362 371603 - 371238 - | hypothetical protein TERM 374 371437 - 371470 + g 70 -11 -3.53012 | gap 2 CGCGCGGCCTGGGCG GCCGCCCCTGCCTCGC GTAC GC-AGGC-GGCGCGGC TTTCCGCGGGCACGG Ajs_0363 371770 - 372555 + | phosphoglycolate phosphatase TERM 375 372668 - 372686 + T 83 -14.6 -3.51976 | overlap 372664 GCGTTGCCAAGCCTC GCTGGGGT AGC ACCCCAGC TTCGTTTGGCGCCTT TERM 376 372702 - 372712 + T 72 -2.4 -4.72272 | overlap 372690 372689 TTCGTTTGGCGCCTT GCGC CTG GCCC TTTTTGATCGCAACG Ajs_0364 374557 - 372815 - | methyl-accepting chemotaxis sensory transducer TERM 377 373123 - 373176 + g 91 -12.4 -4.21974 | gap 1, overlap 373122 GCGCGGCGTTCTGCT GCGT-GGCCTGGTCCATCTGGGTGA TGGCC TCGCCCACCTGGGCCACGCCCGCGC TTTGTTCGCTGCTGG Ajs_0365 375281 - 374679 - | putative lipoprotein transmembrane TERM 378 375310 - 375299 - H 81 -4.4 -5.09426 | opp_overlap 375299 CGCAACTCCAAAAAA GAAC GATC GTTC GTTTCTAAATGTTGC Ajs_0366 375578 - 377137 + | anthranilate synthase component I Ajs_0367 377134 - 377478 + | chorismate mutase Ajs_0368 377475 - 378047 + | anthranilate synthase component II TERM 379 379135 - 379086 - g 77 -15.6 -3.02144 | gap 2 CGACTCGCTGGAAGA CGGCCTGCGCCGCGCCCAGCAGGC CCTG GCCAGC-GG-CGCGGCCCTGGCCA AGCTGCAGCAGCTGG Ajs_0369 378145 - 379179 + | anthranilate phosphoribosyltransferase Ajs_0370 379434 - 380234 + | indole-3-glycerol-phosphate synthase Ajs_0371 380373 - 383045 + | diguanylate cyclase with PAS/PAC sensor Ajs_0372 383100 - 383813 + | uracil-DNA glycosylase Ajs_0373 384701 - 383814 - | hypothetical protein Ajs_0374 385798 - 384698 - | S-adenosylmethionine--tRNA-ribosyltransferase-isomerase TERM 380 384766 - 384746 - G 77 -12.5 -3.65046 | GCCGTAGCTGAAGAA GCGGTAGCG CTG CGCGACCGC GTGGCGGTACAGGTG TERM 381 385463 - 385475 + g 82 -6.2 -4.74801 | overlap 385424 385429 385466 CAGGTGGAGCGTGGC GCCG GGCAG CGGC TTTTTGCTGACCTTC TERM 382 388066 - 388081 + G 70 -10.4 -3.73224 | overlap 388072 GCGATCTGGCCCGGC CGGTGC CCAT GCACCG TTTGCTGCAGGGTGA TERM 383 388140 - 388114 - g 74 -15.1 -3.01712 | TGGGCTCGGGCAAGA CCGTGGTGGCC GCGCT GGCCGCCACGG TGTGCATGGACGCGG TERM 384 388336 - 388324 - g 70 -10.5 -3.64703 | TCGCGCGCATCGAAA GCGGC GAG GCCGC GCTGGTCGTGGGCAC Ajs_0376 387162 - 389333 + | ATP-dependent DNA helicase RecG TERM 385 389473 - 389450 - g 72 -4.5 -4.56597 | opp_overlap 389456, overlap 389452 GTTGCGCGTGAAAAA CACTTCGGC CGCGCC GCCGAAGCC TGCTATGTCTCGCAG TERM 386 389471 - 389452 - g 73 -9.3 -3.90048 | opp_overlap 389456, overlap 389450 TGCGCGTGAAAAACA CTTCGGC CGCGCC GCCGAAG CCTGCTATGTCTCGC Ajs_0377 389402 - 390367 + | LysR family transcriptional regulator Ajs_0378 390445 - 390963 + | Ferritin, Dps family protein TERM 387 391263 - 391240 - g 71 -14.6 -2.62184 | gap 1, overlap 391225 CCGCGGGCGACACCA CGTCCGCGCTG AGC CAGCGCGG-CG AGTGGGAAATGCCCG Ajs_0379 390990 - 392528 + | adenylate cyclase Ajs_0380 392732 - 393604 + | 4-hydroxybenzoate octaprenyltransferase TERM 388 393608 - 393643 + T 100 -20 -4.58395 | gap 1 TTGCTACGCTAGTGA TAGCTGCCAGCGCTTGA CTG TCAAGCGCTGG-AGCTA TTTTTGACGCATGAA Ajs_0381 394525 - 393659 - | pyrroline-5-carboxylate reductase Ajs_0382 396151 - 394655 - | glycerol kinase Ajs_0383 396935 - 396171 - | DeoR family transcriptional regulator TERM 389 396417 - 396384 - G 73 -10.9 -3.64703 | overlap 396385 TTCGCGGTAGTCAAA GTCGCGCAGCGAGCC ATCG GGCTCGATGCCCGAG ATGCCGATGAGCGCG Ajs_0384 397171 - 398244 + | ABC transporter related Ajs_0385 398248 - 399321 + | ABC transporter related TERM 390 399343 - 399375 + F 81 -13.3 -3.72576 | overlap 399346 ACCCCCTGAGCCGCT GCGCGGCTTCCCCCT GCG AGGGGGACGACGCCC TTTGCTGCGGGGCGG Ajs_0386 399470 - 400366 + | binding-protein-dependent transport systems inner membrane component Ajs_0387 400359 - 401171 + | binding-protein-dependent transport systems inner membrane component Ajs_0388 401184 - 401492 + | putative integral membrane protein Ajs_0389 401667 - 403400 + | extracellular solute-binding protein TERM 391 403455 - 403470 + F 91 -9 -4.56775 | opp_overlap 403454 403455 403465 GGATCCGGTCACAAT TCAGGG TAAA CCCTGA TTTTTCCGCCAGGGT TERM 392 403632 - 403646 + G 72 -7 -4.21908 | GGGGTGGCGCTGGAT GCGGCG GCG CGCGGC TTTTCCGTCGTGCTG Ajs_0390 403503 - 405101 + | FAD dependent oxidoreductase TERM 393 405115 - 405105 - f 80 -4.6 -4.82901 | GTGCCGGCATAAAAA GCGC TTG ACGC CCGGTTTTAAGTTTG Ajs_0391 405293 - 405661 + | 50S ribosomal protein L14P Ajs_0392 405672 - 405992 + | 50S ribosomal protein L24P rplE 406002 - 406541 + | 50S ribosomal protein L5 TERM 394 406606 - 406596 - g 71 -3.2 -4.62471 | overlap 406597 CTGAAGCGCGAAAAA CTGG CCG CCAA GTACGCCGCCAAGTA Ajs_0394 406551 - 406856 + | SSU ribosomal protein S14P Ajs_0395 406877 - 407272 + | SSU ribosomal protein S8P Ajs_0396 407297 - 407830 + | 50S ribosomal protein L6P TERM 395 407878 - 407857 - g 83 -2.9 -5.14965 | gap 1 ATGTTGACCAAAAAA GAGCAGCGTC TTC GTCG-TGCCC GCCAGACCCGCATCC Ajs_0397 407842 - 408207 + | 50S ribosomal protein L18P rpsE 408225 - 408746 + | 30S ribosomal protein S5 Ajs_0399 408761 - 408943 + | 50S ribosomal protein L30P Ajs_0400 408954 - 409385 + | 50S ribosomal protein L15P secY 409409 - 410728 + | preprotein translocase subunit SecY TERM 396 410917 - 410901 - g 77 -5.1 -4.63218 | CTTCGGTCAAGAAAA TTTGCCG TAA CTGCAAA ATCATCCGCCGTAAG Ajs_0402 410873 - 410986 + | 50S ribosomal protein L36P rpsM 411010 - 411375 + | 30S ribosomal protein S13 Ajs_0404 411393 - 411797 + | 30S ribosomal protein S11 rpsD 411886 - 412509 + | 30S ribosomal protein S4 TERM 397 412545 - 412560 + F 70 -10.4 -3.57561 | opp_overlap 412535 412534 GAAATCGTCCCTGAA CCGCGA GGCA TCGCGG TTTAGGCGCTTCACC Ajs_0406 412621 - 413613 + | DNA-directed RNA polymerase subunit alpha Ajs_0407 413703 - 414092 + | 50S ribosomal protein L17P TERM 398 414234 - 414215 - T 91 -9.2 -4.56358 | opp_overlap 414216, overlap 414216 GATAGTCAGAGAAAA TGGCCCAC TTCG GTGGGCCT TTTTGTTTTTGTTCA TERM 399 414216 - 414233 + T 100 -12.7 -5.74684 | opp_overlap 414215 414216 ATAGTCAGAGAAAAT GGCCCAC TTCG GTGGGCC TTTTTGTTTTTGTTC TERM 400 414233 - 414216 - T 74 -12.7 -3.33092 | opp_overlap 414216, overlap 414215 ATAGTCAGAGAAAAT GGCCCAC TTCG GTGGGCC TTTTTGTTTTTGTTC Ajs_0408 415682 - 414342 - | UDP-glucose 6-dehydrogenase TERM 401 414758 - 414804 + g 100 -21.6 -2.71712 | opp_overlap 414767 414783, overlap 414758 GGCTGCCGCCGTAGT GCGCAATGATGCGCCGCGCCAG CAA CTGCCGCTGCGCGTCATTGCGG CTTTCGACCGCCAGC TERM 402 414758 - 414805 + g 100 -21.4 -3.53012 | gap 1, opp_overlap 414767 414783, overlap 414758 GGCTGCCGCCGTAGT G-CGCAATGATGCGCCGCGCCAG CAA CTGCCGCTGCGCGTCATTGCGGC TTTCGACCGCCAGCA TERM 403 415300 - 415325 + g 70 -6.1 -4.1711 | gap 1, overlap 415304 GTATCGGCGACCTTG TCGGCCGTGCCC ACG GGG-ACGGTGGA TTTATTGACGATGGT Ajs_0409 416689 - 415679 - | NAD-dependent epimerase/dehydratase Ajs_0410 418203 - 416686 - | glycosyltransferase TERM 404 418388 - 418363 - g 73 -12.6 -3.35679 | overlap 418375 GGTGCCGATCTACAA CGAGGTCGAG AACCTG CCCGACCTCG TGGAGCGCATCGCGC Ajs_0411 418307 - 419338 + | glycosyl transferase family protein Ajs_0412 419335 - 420264 + | hypothetical protein Ajs_0413 421441 - 420503 - | uroporphyrin-III C/tetrapyrrole methyltransferase TERM 405 421008 - 420968 - Gf 72 -11.8 -3.36273 | gap 2, overlap 420955 420953 420969 GCCCGCGAACAGGAA GCCGCCGCTGTCGGCGGTGG GGG CCACCGC-GCCCGCGACG-C TCAGCGCGCTCGTCA Ajs_0414 421441 - 421839 + | hypothetical protein Ajs_0415 421898 - 422491 + | phosphoheptose isomerase Ajs_0416 422488 - 423162 + | transport-associated TERM 406 423249 - 423223 - T 75 -13.7 -3.07443 | overlap 423226 TGACAGGTGATTGAA CCACTGCCCGC CCTGC GCGGGCAGTGC GCCTGGGGCCTCAGT TERM 407 423246 - 423226 - T 72 -14 -2.75382 | overlap 423223 CAGGTGATTGAACCA CTGCCCGC CCTGC GCGGGCAG TGCGCCTGGGGCCTC Ajs_0417 424189 - 423260 - | 3-hydroxyisobutyrate dehydrogenase TERM 408 423979 - 423950 - G 70 -6.3 -4.2828 | gap 1, opp_overlap 423961 GCCCACGCAGCAAAA CACGATGTCCGCGC CTT GTGCGGCC-TCGCG CGGCGTCTTGGCATG TERM 409 424231 - 424214 - R 81 -14.1 -3.53855 | overlap 424212 TCCGTCAAAAAGAGA GGCCCGC AGGG GCGGGCC GGGGGGGGCGAGTGT Ajs_0418 425390 - 424254 - | twitching motility protein TERM 410 424775 - 424797 + g 84 -9 -4.56597 | overlap 424778 CGCCCATCAGGATCA CGTCCGGCGC CTG GCGCAGGGTG TTTTTGAGGGCCGCC TERM 411 424845 - 424860 + g 71 -9 -3.79906 | CAGGCCCACCTCGCG CTGCGT GATC ACGCAG TTCTTGTGCGGATGC TERM 412 425201 - 425230 + g 71 -14.3 -2.90723 | CGGCCACCTGCTTGT CGCTCATGATGGC GCGC GCCAGCGTGAGCG TGTGGTTGGGCGTCA Ajs_0419 426066 - 425437 - | cyclic nucleotide-binding protein TERM 413 425644 - 425615 - G 100 -10.8 -4.59773 | gap 1, overlap 425617 GTGCACGCCGAAAAA CG-GATGCCGCTG TCCAG CAGCGACATCTCG CCCAGGATATCGCCG TERM 414 425976 - 426031 + g 78 -6 -4.66833 | gap 1, opp_overlap 425998, overlap 425978 425995 GCTCCACGCCCTGGC CGGCAAATGCGGTGGTGAAGAACACCG AGT CGGTGCTC-TCCTCTCCGGACTTGCGG TTTTTGGACTTGAGC Ajs_0420 427186 - 426143 - | twitching motility protein TERM 415 426904 - 426920 + g 81 -15.1 -3.50853 | opp_overlap 426904 GAATGGTACGGAACA CCGCGGC CGC GCCGCGG TTCTGGTTGAACGCG TERM 416 426920 - 426904 - G 76 -15.1 -3.09803 | opp_overlap 426904 GAATGGTACGGAACA CCGCGGC CGC GCCGCGG TTCTGGTTGAACGCG Ajs_0421 427226 - 427942 + | alanine racemase domain-containing protein Ajs_0422 427981 - 429117 + | aminotransferase, class V TERM 417 429169 - 429183 + F 71 -12.8 -3.00704 | opp_overlap 429153 429154, overlap 429163 CGCGGGGTGGCGTGG GCCGCG GTG CGCGGC TATGCTTTCCCGCAT TERM 418 429368 - 429421 + G 76 -15.9 -2.93585 | gap 1, overlap 429366 CCACCCAGTCTGGGC GT-GGCCTGCGTGCGCGCCGTGGCGG AGG CTGCCATGGTGGGCGCCCTGGCCGAC TGGTTTGCGGTGTCG Ajs_0423 429185 - 430543 + | hypothetical protein Ajs_0424 431091 - 430603 - | hypothetical protein Ajs_0425 432635 - 431151 - | FAD linked oxidase domain-containing protein TERM 419 432708 - 432681 - R 73 -8.4 -4.07568 | gap 1, overlap 432682 GGCTTGGCTTGAAAA GGCCGAAGGCGGC TAT ACCGCCTT-GGCA AACTCGAACAATGTC Ajs_0426 433382 - 432693 - | MT-A70 family protein Ajs_0427 433972 - 433385 - | hypothetical protein TERM 420 433613 - 433633 + g 77 -6.7 -4.45738 | overlap 433615 GCGAAAGTTGTTCAA GTCCCGGTC ATA GAACGGGTC TTTGTTGTTCCACTC TERM 421 434066 - 434124 + r 72 -12.2 -3.28712 | gap 1, overlap 434070 ATTGTTTTGCGCGAC CACTCCGCGAAGGCCGCGCCGCGCGGC AGCGAG GCAGGACGGCGCCGCCGTGGCGG-GTG TTATCGGAACACCAC Ajs_0428 434973 - 434125 - | formyltetrahydrofolate deformylase TERM 422 434851 - 434841 - G 74 -2.4 -4.71426 | opp_overlap 434841 434843, overlap 434843 CGCGCATGAAGAAAA GGCC GGT GCCC TGGTCGTTGTACTGA TERM 423 436584 - 436618 + r 75 -14.2 -2.78384 | GGAGATCGAGGCGCG GCTGCGCGTGGCCCTG GCG CAGGGGCACCTGCGGC TGTACTACCAGCCGC Ajs_0430 438225 - 437371 - | hypothetical protein Ajs_0431 438515 - 440950 + | ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent TERM 424 440980 - 441013 + F 76 -14.1 -3.18383 | gap 1, overlap 440937 CCACGCGGCGGCAAG GCGCAGAT-GCTATTT AAA AAATAGCTGTCTGCGC TTGCTGCATGCGCCT TERM 425 442387 - 442348 - g 77 -12.1 -3.65351 | opp_overlap 442348 CCACTTCCATGGAAA GCCTGCGC-GCCTCGGCGC TGGA GCGC-GAGGCAGCGGTGGC GCAGGAGCGCAGCCT Ajs_0432 441129 - 443045 + | signal transduction histidine kinase, nitrate/nitrite-specific, NarQ Ajs_0433 443042 - 443713 + | two component LuxR family transcriptional regulator TERM 426 443740 - 443769 + F 70 -7.7 -4.07568 | CGGCATAGTTCTTAG GGAGTAGGGCGGC ATAG GCCGCGCTCGTCC TTTTGCACCGCCCGC Ajs_0434 443860 - 445167 + | major facilitator superfamily transporter TERM 427 446254 - 446279 + G 79 -4.8 -4.8083 | gap 2 TTGCGCTGCCCTTTG GCCCGGCTGAAG GCAG CTTCA-C-GGGC TTTTTCCTGATGTTC TERM 428 446473 - 446486 + G 79 -3.7 -4.8622 | opp_overlap 446434, overlap 446459 446458 TCGCCGGAGCGCTGG GCGCC TACG GGGGC TTTTTCATTCCCAAG Ajs_0435 445188 - 446633 + | nitrite transporter TERM 429 447749 - 447707 - g 78 -6 -4.63218 | GGTGCTGCAAGAAAA GCAGCTGCCCGACGGCCGCA CGG TGATGGTGCCGGGCCGCTAC GTGCGCGCCAGCGAC Ajs_0436 446670 - 450470 + | respiratory nitrate reductase alpha subunit apoprotein TERM 430 450862 - 450842 - g 75 -13.9 -3.25823 | GGCCCCCGAGATGAA GGCCGCGCC CAC GGCGCGCCC GCGCAGCCTGATCAC Ajs_0437 450489 - 452012 + | respiratory nitrate reductase beta subunit Ajs_0438 452032 - 452730 + | respiratory nitrate reductase chaperone NarJ Ajs_0439 452727 - 453461 + | respiratory nitrate reductase gamma subunit TERM 431 453491 - 453470 - f 70 -10.1 -3.56844 | overlap 453468 GCTATGAAGTAAATA GCTGCCAGC GCTT GCTGGTAGC GGGCTGGAGGCCAAT Ajs_0440 453552 - 454388 + | PpiC-type peptidyl-prolyl cis-trans isomerase Ajs_0441 454410 - 455087 + | carbonate dehydratase TERM 432 455175 - 455133 - g 72 -13.3 -3.09635 | gap 1 ACGCCCATGACTGAA GCGCGGC-GCCGCACCGTGC CCCT GCGCAGTGAGCCCGCCGCGC CGGGCCGGCCCTCGG TERM 433 455380 - 455411 + G 75 -4.4 -4.58685 | gap 1, overlap 455362 455379 455405 CGTCGCTGGTGCACG CGGCGGTGATGACGT TTG GCTTCAT-GCCGCTG TTTTTCGCCGGCTTT TERM 434 455405 - 455423 + G 73 -3.7 -4.64861 | overlap 455379 455380 GACGTTTGGCTTCAT GCCGCTG TTTTT CGCCGGC TTTCTTTTCACCGCG Ajs_0442 455124 - 456458 + | NnrS family protein TERM 435 456543 - 456505 - g 81 -14.6 -3.62224 | gap 1 ACAGGCCTTGAACAA TGCAGCCGCCACGGCGG AACTGG CCGCCGCG-CTGCTGCA GGCGCGCCAGACCAT Ajs_0443 456464 - 457126 + | nitroreductase Ajs_0444 457127 - 457552 + | hypothetical protein TERM 436 457586 - 457604 + G 72 -11.6 -3.53761 | GTCCCTGCCCGGTCT GCACGCGC CAG GCGCGGGC TTTGACGAGCCGTTC Ajs_0445 457557 - 458102 + | hemerythrin HHE cation binding domain-containing protein TERM 437 458244 - 458219 - T 100 -16.1 -5.40072 | overlap 458220 CGGCCCCCAAAAAAA GGCGCCGTGGC CAAG GCCACGGCGCG CTGTGCCCCTCACGG TERM 438 458243 - 458220 - T 100 -19.6 -3.83561 | overlap 458219 GGCCCCCAAAAAAAG GCGCCGTGGC CAAG GCCACGGCGC GCTGTGCCCCTCACG Ajs_0446 458626 - 458336 - | hypothetical protein Ajs_0447 460017 - 458803 - | hypothetical protein Ajs_0448 460810 - 460022 - | IclR family transcriptional regulator Ajs_0449 460926 - 461909 + | fumarylacetoacetate (FAA) hydrolase Ajs_0450 461986 - 462954 + | hypothetical protein TERM 439 462970 - 463008 + T 88 -8.3 -4.81083 | gap 2, opp_overlap 462970, overlap 462973 GGTTTGGTGCCAAAA GTG-GCTG-TGCCGCTTGA CAG TCAAGCGCTATCAGCTCAC TTTTTGATAGTTAAG Ajs_0451 465085 - 463019 - | molybdopterin oxidoreductase TERM 440 463252 - 463268 + g 72 -13.7 -3.04461 | overlap 463252 GGGCGCCGTCGGCAA TGCCGCG CGC CGCGGCA TCTTCGGGGTGGATC TERM 441 465146 - 465168 + H 91 -12 -4.34285 | overlap 465140 465144 465143 GTAAACTTCGCGCCG GGCACTCCGT TTA ACGCAGTGCC TTATTTATTTCAATA Ajs_0452 465207 - 466355 + | extracellular ligand-binding receptor TERM 442 467246 - 467218 - g 74 -15.3 -2.56914 | overlap 467214 GAGGCCACCAACGTA GTGCCCGACAGCT GCG AGCTGCAGGGCAC GGTGCGCACCTTCTC Ajs_0453 466471 - 467676 + | amidohydrolase TERM 443 467725 - 467749 + F 100 -15.7 -5.1287 | CGGCTGACATGCCCA GGCTCCACCGT TGC GCGGTGGGGCC TTTTTTACATGTCCG Ajs_0454 467777 - 468877 + | hypothetical protein TERM 444 468910 - 468899 - f 81 -4.4 -5.02074 | opp_overlap 468899 GGAGGCTTTAAAAAA GAAC GGTC GTTC GTGTTTTGACTACAC Ajs_0455 468962 - 469219 + | acyl-CoA-binding protein Ajs_0456 470449 - 469304 - | putative zinc protease protein Ajs_0457 470524 - 471195 + | DNA-3-methyladenine glycosylase I Ajs_0458 471882 - 471265 - | hypothetical protein TERM 445 471904 - 471889 - R 100 -10.4 -4.72272 | GCCGCCCATGAAAAA GCCCTC CGAA GAGGGC TTGCAGGCTAAGCCG TERM 446 471945 - 471928 - R 74 -4.7 -4.58283 | opp_overlap 471929 471942, overlap 471929 TAAGCCGGGCAAAAA GGGGCGA TCAG CCGCCCT GGTTGGCGCGCTTGC TERM 447 471942 - 471965 + r 84 -4.4 -5.1356 | opp_overlap 471929 471928, overlap 471929 AGGGGCGATCAGCCG CCCTGGTTGG CGCG CTTGCCGGGG TTTTTCTTGCTGCGC Ajs_0459 472105 - 471935 - | hypothetical protein Ajs_0460 472395 - 473678 + | cyclopropane-fatty-acyl-phospholipid synthase Ajs_0461 473699 - 474022 + | hypothetical protein Ajs_0462 475097 - 474060 - | hypothetical protein TERM 448 475214 - 475191 - R 100 -19.6 -5.14563 | GTTCCCATGAAAAAA CGCCCGGTGC GCGG GCACCGGGCG TTGGCAGGAAAGGCG TERM 449 475249 - 475226 - R 78 -12.4 -3.72576 | opp_overlap 475243 475247, overlap 475227 GGCGTTGGCAGGAAA GGCGGGCG GACGGACG CGCCCGCC GCGCTGGCGCAGATC TERM 450 475253 - 475227 - R 74 -13.7 -2.83403 | gap 1, opp_overlap 475243 475247, overlap 475226 GCGTTGGCAGGAAAG GCG-GGCGGACG GACG CGCCCGCCGCGC TGGCGCAGATCAGTC Ajs_0463 476252 - 475263 - | hypothetical protein TERM 451 475578 - 475599 + g 70 -10.1 -3.65522 | CAGGCGCTGGTTGGT GGTCACGGC AAAG GCCTTGACC TTCTTGCCCTCGATC Ajs_0464 477691 - 476444 - | putative phenylacetate-CoA ligase Ajs_0465 478593 - 477784 - | ABC transporter related Ajs_0466 480115 - 478790 - | hypothetical protein Ajs_0467 481268 - 480192 - | inner-membrane translocator Ajs_0468 482316 - 481387 - | inner-membrane translocator Ajs_0469 483112 - 482327 - | ABC transporter related TERM 452 482381 - 482402 + g 71 -2.8 -4.63527 | overlap 482383 482384 GTTGTTGCGCACTTC GTCCGGCG CGCCGT CGCCGATC TTTTTGCCGTAGTCC Ajs_0470 485183 - 483135 - | AMP-dependent synthetase and ligase Ajs_0471 485258 - 487000 + | peptidoglycan binding domain-containing protein Ajs_0472 487005 - 487814 + | hypothetical protein Ajs_0473 487961 - 488779 + | Crp/FNR family transcriptional regulator TERM 453 489753 - 489738 - g 70 -2.4 -4.62069 | GCGCGAGGGCAAAAA GCGCCA GATC CGCCGC ATGTGCGAGCTGGTG TERM 454 489843 - 489867 + G 76 -8.6 -4.1964 | gap 1 GCCGCCGGGCCAGTG GCGCT-ACCTG GCGC CGGGTGAGCGC TTTTAAGCTATTAAA Ajs_0474 488791 - 489873 + | RNA-binding S4 domain-containing protein TERM 455 489967 - 489947 - f 76 -6.8 -4.51196 | opp_overlap 489948, overlap 489948 TTGAAATGCAGAAAA GGAGAGCG CAAGC CGCTCTCT TTTTTGATGGCTGCG TERM 456 489948 - 489966 + F 100 -10.3 -5.1675 | opp_overlap 489948 489947 TGAAATGCAGAAAAG GAGAGCG CAAGC CGCTCTC TTTTTTGATGGCTGC TERM 457 490953 - 490930 - g 77 -12.4 -3.66772 | gap 1, overlap 490921 490920 GGAAACCGTGAACAA GGCCAGCGCCC TGT GGACGC-GGCC CAAGAAGGACATCAC Ajs_0475 490220 - 492172 + | heat shock protein 90 TERM 458 492190 - 492212 + F 70 -12.7 -2.87132 | gap 1 CGGGCCTGCCACCCC CGCGCCCGGC CTGT GCCGGGC-CG TCTCTACAGACCGAC TERM 459 492256 - 492232 - f 72 -13.6 -2.82491 | gap 1, opp_overlap 492232 TACAGACCGACCACA CCCGGTCCTGC GCAA GCAGG-CCGGG TTTTTTTGCGCCACG TERM 460 492232 - 492256 + F 100 -13.6 -5.40072 | gap 1, opp_overlap 492232 TACAGACCGACCACA CCCGGTCCTGC GCAA GCAGG-CCGGG TTTTTTTGCGCCACG Ajs_0476 492376 - 493368 + | hypothetical protein Ajs_0477 493585 - 494184 + | hypothetical protein TERM 461 494773 - 494802 + G 79 -2.7 -5.0133 | overlap 494726 494774 494777 CCCACGCTGGTGCCG GTGCTGGTCTGGC TCTG GCTGGACCGTCAG TTTTTTACCGACGTG Ajs_0478 494329 - 494880 + | hypothetical protein Ajs_0479 495927 - 494887 - | serine/threonine protein kinase TERM 462 495260 - 495221 - G 70 -9.8 -3.73775 | TCCAGGTCCACGAAA TGCGGGCCGCCGTGGCCG GCGT CGTCCACGGGCGTCCACA GCACGTTGCCGGGGT Ajs_0480 497402 - 495963 - | serine/threonine protein kinase TERM 463 497457 - 497439 - R 72 -7.3 -4.11484 | overlap 497440 CTGAAGGGTGGAAAA GGCGGGC TCAGC GCCCGCG CTCCAGCCGGTCGGC Ajs_0481 498204 - 497446 - | metallophosphoesterase TERM 464 498007 - 498045 + g 70 -13 -3.05596 | GAGGGCGGCCGCGTC ATGGTTGCCGCGCACGCA CAG TGCGCCCGCGGCGGCCAG TTGCATGGCCCGGTC Ajs_0482 498751 - 498335 - | OsmC family protein TERM 465 498796 - 498779 - R 76 -8.3 -4.19678 | TCAGAGTGGAACAAA GGCCCCG CCAA CGGGGGC ATGAGGGAAAACGGT Ajs_0483 499268 - 498813 - | MarR family transcriptional regulator TERM 466 499622 - 499648 + r 91 -9.5 -4.40358 | gap 1, opp_overlap 499621 CGGCAGTGAACCCAT GGATCG-CAGCG GCAA CGCTGGTGATCC TTTTCTGAGCTGCCT TERM 467 499813 - 499827 + r 75 -2.8 -4.85599 | GTCAACTCGCCCGTA GGCA CCGGCTC TGCC TTTTTCTGAGCTGCC TERM 468 500526 - 500551 + r 71 -8.2 -3.89822 | opp_overlap 500519, overlap 500527 GCAGTGAACCGGCCT ACTGTGGCCG AGCGTG CGGCCACGGC TTTCTGAGCTGCCTA TERM 469 501740 - 501752 + r 76 -6.9 -4.40358 | opp_overlap 501724 CCAGCGCATCTCCCT GCGCT GCT GGCGC TTTTCTGAGCTGCCT TERM 470 502445 - 502471 + r 74 -2.1 -4.85599 | gap 1, overlap 502447 GCGGCAGTGAACCTC G-CGCGCTGGGC ATCC GCCAGGCGCTTC TTTTTCTGAGCTGCC TERM 471 502447 - 502468 + r 91 -9.3 -4.53475 | overlap 502445 GGCAGTGAACCTCGC GCGCTGGGC ATCC GCCAGGCGC TTCTTTTTCTGAGCT TERM 472 502993 - 503011 + r 75 -3 -4.85599 | GAACTGCTCATGGTT CTCACTCC TGC GGGATGGG TTTTTCTGAGCTGCC TERM 473 503422 - 503433 + r 74 -5.8 -4.40358 | GCACAATCCCCGCAC CTGG CGCG CCAG TTTTCTGAGCTGCCT TERM 474 503828 - 503855 + r 71 -8.2 -3.89822 | opp_overlap 503823, overlap 503829 CGGCAGTGAACCTGG GGGGGCCCCCGC TTGC GGGGGGGACCCA TTTCTGAGCTGCCTA Ajs_0484 504597 - 504022 - | CRISPR-associated Csy4 family protein TERM 475 504387 - 504433 + g 71 -9.3 -3.86346 | CCATCAGGCGCTGCA GCGC-CTCGGGCGTGCCGTGCAG GCG CAGCACCGCGC-CCAGGGTGCGC TTTGTCAGCGGCTGG Ajs_0485 505636 - 504611 - | CRISPR-associated Csy3 family protein TERM 476 505039 - 505057 + g 76 -5.9 -4.55544 | overlap 505029 505052 CGGCAGCCATCGCCT GGCCTAG CTCGT CGAGGCC TTTTGCTTCTGTATT Ajs_0486 506775 - 505693 - | CRISPR-associated Csy2 family protein TERM 477 506409 - 506434 + g 79 -8.9 -4.36914 | gap 1, overlap 506408 506409 GGTTGCTTTGCACCA GCGC-TGCCGGG GTG CCGGGCGCGCGC TTTTCTGACACGGCC TERM 478 506491 - 506511 + g 77 -11.1 -3.86194 | GCGGCCTTCTTCCAC GATGGCGGC GGT GCTGCCGTC TTTGTCCACCGGGTT Ajs_0487 508217 - 506772 - | CRISPR-associated Csy1 family protein TERM 479 507283 - 507246 - G 83 -8.3 -4.62069 | gap 1, overlap 507248 GTTGGACTCCAAAAA CACCCGCAGCGC-CCGCA CCG TGCGGCGCACCTCGGGCC GGGCGATGAACAGGC TERM 480 507281 - 507248 - G 84 -13.1 -3.92746 | gap 1, overlap 507246 TGGACTCCAAAAACA CCCGCAGCGC-CCGCA CCG TGCGGCGCACCTCGGG CCGGGCGATGAACAG TERM 481 507942 - 507960 + g 73 -9.6 -3.90744 | opp_overlap 507941 507942 507944 CAGGCTTGAAAAATC GACGGCAA GGT TTGTCGTC TTCTTTACGGGCAAG TERM 482 508052 - 508065 + g 70 -2.3 -4.68705 | CGCGTTCAAGTATGT GCACC AATT GGTAC TTTTCTTGAGCTTCT Ajs_0488 511758 - 508222 - | CRISPR-associated helicase Cas3 family protein TERM 483 508250 - 508305 + g 100 -24.9 -3.33737 | gap 1, opp_overlap 508248, overlap 508251 CGATTGAAACCCAGT TGTTCGTGCCACCGCCAGCCAGCCTG CGATT CAGGCAGGCTGGCGGTGGCAT-AGCG TTCTGCACATTGCTC TERM 484 508251 - 508304 + g 100 -26.2 -2.59921 | gap 1, opp_overlap 508248, overlap 508250 GATTGAAACCCAGTT GTTCGTGCCACCGCCAGCCAGCCTG CGATT CAGGCAGGCTGGCGGTGGCAT-AGC GTTCTGCACATTGCT TERM 485 508889 - 508903 + g 76 -2.1 -4.91511 | gap 1, overlap 508889 508890 CCCGGCTTTTCATAC G-CAGG CTGG CCTGGC TTTTTGTAATGCCGT TERM 486 510418 - 510436 + g 77 -5.2 -4.58283 | opp_overlap 510418 GTCTTGCCAGGCAAA GCGCGG GTCGGCG CTGCGC TTTTTGAGGGGCTTA Ajs_0489 512759 - 511755 - | CRISPR-associated Cas1 family protein TERM 487 512503 - 512489 - G 75 -9.2 -4.07885 | CATTGGCTGCGAAAA GCGGCG TAC CGCCAC CACCGCAGAAGCCCA Ajs_0490 513976 - 512795 - | alanine racemase domain-containing protein Ajs_0491 514604 - 513960 - | phosphoglycerate mutase Ajs_0492 515091 - 514627 - | hypothetical protein Ajs_0493 515753 - 515118 - | hypothetical protein Ajs_0494 516751 - 515798 - | PP-loop domain-containing protein Ajs_0495 517127 - 516756 - | dihydroneopterin aldolase Ajs_0496 517930 - 517145 - | short-chain dehydrogenase/reductase SDR Ajs_0497 517949 - 519049 + | hypothetical protein TERM 488 519572 - 519614 + G 74 -7.5 -4.27584 | gap 1, opp_overlap 519564, overlap 519573 TCATCAACGGGCTCA CCCCCTGGCTGCGCCGCCTG GGGC TGGGCCG-GCTGCCGGGGGA TTTTCAGTTCCGCCT Ajs_0499 519517 - 519711 + | hypothetical protein TERM 489 519900 - 519936 + G 72 -13 -3.14344 | gap 2, opp_overlap 519890, overlap 519901 CAAAGTGGCCGTGTG C-CTGGCGGACC-CTGCC AAC GGCAGCGGGCCGCCGGTG TTGCTCACGCGCGTG TERM 490 519901 - 519934 + G 81 -16.7 -3.13403 | gap 1, opp_overlap 519890, overlap 519900 AAAGTGGCCGTGTGC CTGGCGGACC-CTGCC AAC GGCAGCGGGCCGCCGG TGTTGCTCACGCGCG Ajs_0500 519808 - 520818 + | glucokinase Ajs_0501 522312 - 520894 - | alpha,alpha-trehalose-phosphate synthase (UDP-forming) TERM 491 521908 - 521854 - G 81 -5.5 -4.76041 | gap 1, overlap 521855 CACATGCAGGAAAAA TCCGAT-GCGCTGGCGGCAACCCAGC GCGC GCAGCTCCGCCGCCAGCGGGATCAGG TGGTAGTCGTGCACC Ajs_0502 524149 - 522329 - | glycoside hydrolase 15-related Ajs_0503 524877 - 524146 - | HAD family hydrolase TERM 492 524699 - 524684 - G 83 -4.6 -5.00884 | AGTGGGTCCAAAAAA TGGTCG ATAT CGGCCA TGGTGCGGCCGGTGA Ajs_0504 525004 - 525441 + | thioredoxin Ajs_0505 526863 - 525586 - | metal dependent phosphohydrolase Ajs_0506 527942 - 527175 - | metallophosphoesterase Ajs_0507 528646 - 527960 - | glutathione S-transferase domain-containing protein TERM 493 528746 - 528764 + r 72 -4.5 -4.58395 | GAAAGCACCGTATGC CAAGCGC AAACC GCTCTTG TTTTTGAAGCGTCAA Ajs_0508 529348 - 528776 - | 5-formyltetrahydrofolate cyclo-ligase TERM 494 529523 - 529477 - g 73 -9.3 -3.95073 | gap 1, overlap 529497 529498 529500 CTGGAGATGCAGAAA GCCTTCCGCAAGGGCGACAAGC AGCG GCTTGCCGCGC-TGCTGCCGGC CGCGCGCGGCCATGC TERM 495 531163 - 531114 - g 75 -14.3 -3.32844 | gap 3 GGCGGCAGCCTACAA CG-CCGGC-CCGGGCCGCCCGCGC AACTG GCGC-AACGGCCCGGTGCTGGACG CGGCCATCTGGGCCG Ajs_0509 529372 - 531345 + | lytic transglycosylase, catalytic Ajs_0510 531993 - 531421 - | cytochrome B561 Ajs_0511 532243 - 531974 - | putative signal peptide protein Ajs_0512 533006 - 532302 - | putative hydroxylase TERM 496 532497 - 532473 - GR 75 -13.5 -2.99259 | overlap 532470 GATCCAGAAGAACGA GGCCACGCGCG CCC CGCGCGTGACG GGCGTGACGCGGTGC Ajs_0513 534076 - 532979 - | (S)-2-hydroxy-acid oxidase TERM 497 533571 - 533547 - GR 81 -7.8 -4.46212 | gap 1 GCGGGCATCACAAAA CCCGCCTGCAG TGCG CTGC-GGCTGG CCAGCTGGATGCTGG TERM 498 534028 - 533997 - GR 70 -12.2 -3.14125 | opp_overlap 533997, overlap 533995 GCCACATAGGCAAGA CGGCCCGCGTCC ATGTGCTG GGGCGCGAGCCG TTCGTAATCGATGGC TERM 499 533997 - 534028 + gr 71 -12.2 -3.22298 | opp_overlap 533997 533995 GCCACATAGGCAAGA CGGCCCGCGTCC ATGTGCTG GGGCGCGAGCCG TTCGTAATCGATGGC TERM 500 534086 - 534123 + r 91 -15.8 -3.91084 | gap 1, opp_overlap 534081, overlap 534087 534088 TGTCATCAAATTTGA TAG-CTGCTAGCGCTTG TCCAT CAGGCGCTAGCAGCCTA TTTGATTACAAGTCC TERM 501 534087 - 534121 + r 91 -16.5 -3.54414 | opp_overlap 534081, overlap 534086 534088 GTCATCAAATTTGAT AGCTGCTAGCGCTTG TCCAT CAGGCGCTAGCAGCC TATTTGATTACAAGT TERM 502 534088 - 534120 + r 90 -20 -2.72166 | opp_overlap 534081, overlap 534087 534086 TCATCAAATTTGATA GCTGCTAGCGCTTG TCCAT CAGGCGCTAGCAGC CTATTTGATTACAAG Ajs_0514 536435 - 534129 - | TonB-dependent receptor Ajs_0515 537612 - 536686 - | beta-lactamase domain-containing protein TERM 503 536973 - 536936 - G 95 -19.1 -3.53012 | gap 1 GGGTCGGCCTCGAAA CCCGCCA-GCCGGCGCCG CGC CCGCGCCAGCGCGGCGGG CACGTCGCCAAACAC Ajs_0516 539332 - 537647 - | AMP-dependent synthetase and ligase Ajs_0517 539473 - 540384 + | PGAP1 family protein phhA 541242 - 540403 - | phenylalanine 4-monooxygenase Ajs_0519 542296 - 541328 - | hypothetical protein TERM 504 542096 - 542108 + g 74 -10.5 -3.79906 | overlap 542097 TGCGCCCAGGTTGCC GCCGG CCC CCGGC TTGTTCTGCACCTGG Ajs_0520 543505 - 542387 - | 4-hydroxyphenylpyruvate dioxygenase Ajs_0521 543691 - 544176 + | AsnC family transcriptional regulator TERM 505 544227 - 544263 + F 75 -4.3 -4.75174 | overlap 544229 544252 GAAGTCCTGTATTGA TAGCTGCTTGCGCTTAC TGG GTAAGGGCTAGAGGCCA TTTTTCCCTTGGATC Ajs_0522 544408 - 545085 + | GCN5-related N-acetyltransferase Ajs_0523 545137 - 546057 + | CBS domain-containing protein Ajs_0524 546057 - 547655 + | apolipoprotein N-acyltransferase TERM 506 547747 - 547775 + F 100 -7.9 -5.47218 | opp_overlap 547737 547739 547740, overlap 547748 547750 TAATAGAGGGCCTTC GCCGCCCGTGGCC GCG GGCCGCGCGCTGA TTTTTTTGCATCAAC TERM 507 547748 - 547774 + F 79 -11.4 -3.87608 | opp_overlap 547737 547739 547740, overlap 547747 547750 AATAGAGGGCCTTCG CCGCCCGTGGCC GCG GGCCGCGCGCTG ATTTTTTTGCATCAA TERM 508 547750 - 547772 + F 76 -12.6 -3.51573 | opp_overlap 547737 547739 547740, overlap 547748 547747 TAGAGGGCCTTCGCC GCCCGTGGCC GCG GGCCGCGCGC TGATTTTTTTGCATC Ajs_0525 547836 - 548360 + | 3-hydroxydecanoyl-(acyl carrier protein) dehydratase Ajs_0526 548357 - 549580 + | beta-ketoacyl synthase TERM 509 549601 - 549618 + F 100 -14.1 -4.4078 | TCGGGCCAGGTACGA CGGGGGC TGCG GCCCCCG TTTTGCTTGGACGCC TERM 510 549787 - 549803 + G 73 -3.6 -4.59109 | opp_overlap 549774 AAGTGGGCGCCGGTA CGTCGC ATACA GCTACG TTTTTGAGAGCTCTG glyQ 549687 - 550640 + | glycyl-tRNA synthetase subunit alpha TERM 511 550988 - 550958 - g 70 -11 -3.61398 | GGCGCTGCTCAAGAA GCTGACCGCGCTGG GCG CCGACGCCGCCAGC GTGCCGCAGCTCAAG Ajs_0528 550671 - 552833 + | glycine--tRNA ligase TERM 512 553407 - 553447 + G 79 -13.2 -3.72576 | gap 1, overlap 553408 CCGCCCGGCTGGCCC GCCGGCACGCGCGCCCATG CCAG CCTGGGCGCGC-TGGCGGA TTTCATCGCCCCGCA TERM 513 553408 - 553446 + G 79 -16.7 -2.83403 | gap 1, overlap 553407 CGCCCGGCTGGCCCG CCGGCACGCGCGCCCATG CCAG CCTGGGCGCGC-TGGCGG ATTTCATCGCCCCGC Ajs_0529 552918 - 553493 + | D-alpha,beta-D-heptose 1,7-bisphosphate phosphatase Ajs_0530 553571 - 554320 + | phospholipid/glycerol acyltransferase TERM 514 554415 - 554400 - g 75 -11.8 -3.63627 | GTGCCACAGCCGAAA CGGGCG ATAG CGCCCG TCCAACAAGCGCCAG Ajs_0531 554322 - 555242 + | hypothetical protein TERM 515 555518 - 555553 + G 73 -13.2 -3.28712 | gap 1, overlap 555519 TTTGACGCGCAGTTG C-GCGCGGCAGTGCCGC CCG GCGGCACGGCGGTGCTG TTGTGCCGCAGCGGC TERM 516 555519 - 555551 + G 84 -16.9 -3.21276 | overlap 555518 TTGACGCGCAGTTGC GCGCGGCAGTGCCGC CCG GCGGCACGGCGGTGC TGTTGTGCCGCAGCG Ajs_0532 555242 - 555721 + | rhodanese domain-containing protein TERM 517 555755 - 555791 + T 100 -18.8 -4.28432 | opp_overlap 555755 555757, overlap 555756 TTGCTCTCAAAAAAA TAGCTGCCAGCGCTTG ATGGG CAAGCGCTGGCAGCCG TTTTGGCTTGAGATT TERM 518 555791 - 555755 - T 100 -18.8 -5.40072 | opp_overlap 555755 555756, overlap 555757 TTGCTCTCAAAAAAA TAGCTGCCAGCGCTTG ATGGG CAAGCGCTGGCAGCCG TTTTGGCTTGAGATT TERM 519 555756 - 555790 + T 95 -20.1 -3.16336 | opp_overlap 555755 555757, overlap 555755 TGCTCTCAAAAAAAT AGCTGCCAGCGCTTG ATGGG CAAGCGCTGGCAGCC GTTTTGGCTTGAGAT TERM 520 555789 - 555757 - T 100 -23.6 -4.34482 | opp_overlap 555756 555755, overlap 555755 GCTCTCAAAAAAATA GCTGCCAGCGCTTG ATGGG CAAGCGCTGGCAGC CGTTTTGGCTTGAGA Ajs_0533 556303 - 555815 - | peptidoglycan-binding LysM TERM 521 556029 - 556063 + g 82 -4.9 -4.8622 | gap 1 TGGTTGTCCACGCTG GTCACGCTG-GCCACG TTGC CGCAGCACAGGGTGAC TTTTTCCTTGGCCGC TERM 522 556410 - 556385 - H 95 -10.3 -4.58395 | opp_overlap 556385 556386, overlap 556386 GCCATGTCGGAAAAA CGCCCGCGCCG GCGA CAGCGCGTGCA TTTGCGGCGCTCTGC TERM 523 556409 - 556386 - H 72 -11.6 -3.34716 | opp_overlap 556386 556385, overlap 556385 CCATGTCGGAAAAAC GCCCGCGCCG GCGA CAGCGCGTGC ATTTGCGGCGCTCTG TERM 524 556455 - 556445 - H 88 -6.8 -5.22039 | GGCAAAGGCAAAAAA CGGA TAA TCCG CGCCATGACTTTCCT Ajs_0534 556460 - 557236 + | pantothenate kinase Ajs_0535 557920 - 557267 - | TetR family transcriptional regulator Ajs_0536 558486 - 558013 - | poly(hydroxyalkanoate) granule-associated protein TERM 525 559055 - 559041 - g 86 -6.4 -4.99035 | CCAGCTACACAAAAA GAAGCA TTC CGCTTC CTGCACGTGAGCACC Ajs_0537 558675 - 559736 + | dTDP-glucose 4,6-dehydratase Ajs_0538 559733 - 560611 + | dTDP-4-dehydrorhamnose reductase TERM 526 560922 - 560956 + G 89 -8.5 -5.00616 | gap 1 CGAGCGGTTCCTGAA TGGCG-CGCCCAGCGC CCTG GTGCTGGGCGACAACA TTTTTTACGGCCACG Ajs_0539 560620 - 561504 + | glucose-1-phosphate thymidylyltransferase TERM 527 561567 - 561583 + G 100 -3.6 -5.75342 | TCGAGCCTAAAGTGT TCGGCG ACGCA CGCGGA TTTTTTTTCGAGAGC Ajs_0540 561512 - 562060 + | dTDP-4-dehydrorhamnose 3,5-epimerase TERM 528 562223 - 562212 - g 77 -5.8 -4.62471 | opp_overlap 562212 CCCAACCTGGAAAAA CTGC ATGA GCAG TTTGCCGCGTTGTTG TERM 529 562365 - 562349 - g 73 -12.3 -3.48276 | CGCCCTGGGACAGAA CATGGGC ATT GCCCATG CACAGAATCGCGGTA Ajs_0541 562152 - 563054 + | rhamnosyltransferase TERM 530 563902 - 563886 - g 89 -2.1 -5.31877 | ACCTACCAGAAAAAA TGGGCCG CGG CGGGGCA GGCGCTACCGGAACA TERM 531 564658 - 564622 - g 77 -7.1 -4.51799 | overlap 564627 ATCAAAGCGACAAAA TCAAAGTGACGCGCCGC GAG ACGGCGGGCCACATCGT CCACGCCACGAACGA TERM 532 564653 - 564627 - g 91 -12.2 -4.27483 | overlap 564622 AGCGACAAAATCAAA GTGACGCGCCGC GAG ACGGCGGGCCAC ATCGTCCACGCCACG TERM 533 564678 - 564698 + G 81 -11.1 -4.07455 | opp_overlap 564671 GCCACGAACGATGCC CTCGCGCTG GCC CAGGGCGAG TTTGTCGTGTTCCTC TERM 534 564824 - 564843 + G 78 -10 -4.07687 | gap 1, overlap 564824 CAAGCTCGATGAGCA G-GGCAGGC GCT GCCTGCCGC TTTTCAAACCCCAGT Ajs_0542 563100 - 566051 + | glycosyl transferase family protein Ajs_0543 566136 - 567431 + | hypothetical protein Ajs_0544 567445 - 568287 + | ABC-2 type transporter TERM 535 569577 - 569589 + G 79 -3.4 -5.00884 | CGCATGCCCCATGGC TCGT GCTGG ACGA TTTTTTCCCCAACCT Ajs_0545 568277 - 570727 + | ABC transporter related TERM 536 570806 - 570827 + G 73 -10.9 -3.72576 | gap 1, opp_overlap 570795 TCAACCAGGCCCAGC CCG-GCAGCT GGC AGCTGCTCGG TTTCATGGCCGACCC Ajs_0546 570724 - 571374 + | hypothetical protein TERM 537 572189 - 572225 + G 78 -13.8 -3.56092 | gap 2 AACCGATTTATCTGT TGCTG-GCCGGCATG-GC GCT GCTCGTGCCGGCGCGGCA TTTCGGCGGTCGTCG TERM 538 572236 - 572249 + G 90 -2.3 -5.5112 | overlap 572235 CGGCATTTCGGCGGT CGTCG TGGG CGAGG TTTTTTCTTGCTGGC Ajs_0547 571414 - 572862 + | membrane protein-like protein Ajs_0548 572939 - 574018 + | integrase catalytic subunit TERM 539 574454 - 574473 + G 70 -13.6 -3.01791 | overlap 574456 GGGCAATCGCATGCT GACGGGCT TCGT AGCCCGTC TGTTCGGGCGGCGCT Ajs_0549 574053 - 575018 + | glycosyl transferase family protein TERM 540 575268 - 575282 + G 77 -4.2 -4.79352 | opp_overlap 575266, overlap 575265 GGTTGGTCAACTATG GCGC ATACGCC GCGC TTTTGTTGTGGCTGC Ajs_0550 575015 - 575398 + | GtrA family protein Ajs_0551 575681 - 576832 + | DegT/DnrJ/EryC1/StrS aminotransferase TERM 541 577700 - 577711 + G 79 -7.2 -4.60487 | AACTCCGTCACCTAT GGCG CCAA CGCC TTTTTGGGGGTCATC Ajs_0552 577232 - 579193 + | TonB-dependent receptor, plug Ajs_0553 579205 - 580149 + | hypothetical protein Ajs_0554 580146 - 582173 + | integral membrane sensor hybrid histidine kinase TERM 542 582627 - 582600 - g 75 -9 -4.08216 | gap 1, opp_overlap 582621, overlap 582601 CGAGGCGCTGCAAAA GCCGGCCGCCCGC CCC GCCG-CGGCCGGG CCCCAGGCCCCGGTC Ajs_0555 582184 - 582882 + | two component LuxR family transcriptional regulator TERM 543 583648 - 583611 - g 89 -11.1 -4.2558 | gap 1, opp_overlap 583616 583617 CAGCGGCCAGCAAAA CGCCAGCGGCGCCCGGCC CGA GGTGGTGCGCCGC-GACG CCTGGGAGCGTGCCG Ajs_0556 582919 - 583968 + | glycosyl transferase family protein TERM 544 584882 - 584906 + G 100 -19.3 -4.13728 | GCGCATCGACCGCGC GCTCGCGGCCC TGG GGGCCGTGAGC TTTTCCACCTATGTG Ajs_0557 583986 - 585107 + | acyltransferase 3 TERM 545 585254 - 585231 - f 91 -5.2 -5.26875 | TTCGCAAGGAAAAAA TCCGGCTG AAAAAGGG CGGCCGGA ACCCGGGGTGTAGTC TERM 546 585330 - 585362 + F 78 -3.3 -5.07107 | overlap 585330 585328 585327 585335 585361 ATAGAATCATACGGG TCGACGGGCGGGG AAGCCCC CCTCTTCGGTCGA TTTTTTCAACGTTTG Ajs_0558 585393 - 591035 + | hypothetical protein TERM 547 591128 - 591149 + F 100 -6.5 -5.80364 | opp_overlap 591124 AAAGCTTGAAAGAAA CCCTGTCTC CTAG GAGGTGGGG TTTTTTTATTGCAGT Ajs_0559 591448 - 592710 + | glycosyl transferase, group 1 Ajs_0560 592732 - 592977 + | hypothetical protein Ajs_0561 593025 - 593528 + | hypothetical protein Ajs_0562 593581 - 594693 + | hypothetical protein TERM 548 595130 - 595176 + GT 73 -10.8 -3.65812 | gap 1, overlap 595119 AGTCTCGATGCAGCG GGGGTGGCAGCCCCCGCGCAC GGTTCA GTG-GCAGGTTCTGTCACCCC TTGTGTTGGCAGCAC Ajs_0564 595924 - 595154 - | hypothetical protein Ajs_0563 594690 - 595211 + | hypothetical protein TERM 549 595404 - 595371 - GT 71 -6 -4.2828 | gap 3 CGGCAGCCAGCAAAA CCGGG--GGTGC-GCGC AAG GCGCTGCACCTGCCCTG GCAGCAGCCAGGGGC TERM 550 595979 - 596017 + Tr 93 -16.1 -3.78022 | gap 2, opp_overlap 595992 595995 595996, overlap 595947 CCGGGCGGGCGGCGG GCACCGGCACCAACAAGGC AAA GCCTTG-TGG-GCCGGGGC TTTGCTGGGTATAGC Ajs_0565 596392 - 596144 - | hypothetical protein TERM 551 596378 - 596366 - G 80 -9.1 -4.20367 | TTGCTCAAGAAAGAA GGTGG ACA CCACC AAGACTGAGGACATA TERM 552 596436 - 596457 + H 100 -10.1 -5.75342 | TGCCACTGATTGAGA CCGCGGGTT GTAC GACCTGCGG TTTTTTTTCGCCCCC TERM 553 596638 - 596619 - g 83 -3.5 -5.24129 | overlap 596620 GTTGGGTATAAAAAA CCAGGGT ACGGGA ACCCTGC GCGTGATGGAGCTGT TERM 554 597860 - 597876 + G 77 -3.5 -4.7254 | overlap 597862 597862 ACATTGCCGGCATCA CGCCCGC AAA GCGAGGG TTTTTGATGGGCAAT Ajs_0566 596602 - 597951 + | DNA-cytosine methyltransferase Ajs_0567 598489 - 598013 - | hypothetical protein Ajs_0568 598941 - 598489 - | hypothetical protein Ajs_0569 598999 - 599304 + | hypothetical protein TERM 555 599763 - 599776 + G 70 -5.9 -4.18934 | GGCGGGCCCTGTGCG CGCTC AACC GGGCG TTTGTTCGGATGCTG Ajs_0570 599542 - 599994 + | transposase IS3/IS911 family protein Ajs_0571 600015 - 600326 + | IS66 Orf2 family protein Ajs_0572 600407 - 601921 + | transposase IS66 Ajs_0574 602919 - 604310 + | transposase, IS4 family protein TERM 556 604982 - 605005 + F 77 -3.8 -4.87291 | overlap 604987 TTGCTTTGATGCATC TCGGGGTCAC GCTC GTGACTTTGG TTTTTGGTTGAACTG TERM 557 604987 - 605000 + F 73 -6.7 -4.37737 | overlap 604982 TTGATGCATCTCGGG GTCAC GCTC GTGAC TTTGGTTTTTGGTTG Ajs_0576 605614 - 606702 + | transposase, IS4 family protein TERM 558 607234 - 607217 - f 80 -4.7 -4.84914 | ATTGATACAAGAAAA CAGCGGG AATC CCCTCCG GGACGCGATAAATTC TERM 559 607254 - 607282 + F 100 -16.8 -5.09895 | gap 1, opp_overlap 607251, overlap 607257 GCGATAAATTCACTC GCACGTGGGCTGC ATGG GCAGCCCACG-GC TTTTTTGAGTGAATG TERM 560 607257 - 607280 + F 86 -18.2 -2.78405 | opp_overlap 607251, overlap 607254 ATAAATTCACTCGCA CGTGGGCTGC ATGG GCAGCCCACG GCTTTTTTGAGTGAA Ajs_0578 607304 - 608860 + | glycosyl transferase, group 1 TERM 561 608987 - 608932 - T 79 -16.6 -2.52464 | gap 1 GCGTTCCCTAATGCA GCATGGCCCGGCCCGCGGGGGCGGCCG GGC CGGCCGCTGCCGCGAGCCATGCGG-GC CAGTCCTGCGTAGGC Ajs_0579 609481 - 608924 - | hypothetical protein Ajs_0580 610338 - 609487 - | SapC family protein TERM 562 610375 - 610387 + H 74 -4.7 -4.62054 | overlap 610375 610376 GGTATTGTGCGCATG GCGCG CAG CGCGG TTTTGCTTTACTTGG TERM 563 610673 - 610694 + H 77 -2.2 -5.03314 | overlap 610674 610676 610677 TGATGCAGGCCGGAT CCATGCGT TGCCGC ACGCGTTG TTTTTTCGCCGTCGC TERM 564 610713 - 610737 + H 79 -10.9 -3.96068 | TTTCGCCGTCGCGGT CTCTTATATGA AAT TCATATAGGAG TTCTTGTTAGACTGC Ajs_0581 610763 - 611377 + | hypothetical protein TERM 565 612785 - 612820 + G 82 -16.8 -2.87132 | gap 1 GCGCGCGCCTGTCGG GCGGGCAGCGCCAGCGC GTG GCGCTGGCGCGGG-CGC TGTATGGCGACCCGG Ajs_0582 611374 - 613119 + | type I secretion system ATPase TERM 566 613212 - 613222 + G 75 -3.2 -4.77036 | overlap 613200 GGGCGCTGTGGGCCT TTCG CCG CGAG TTTTTGGTGGTGGGC Ajs_0583 613154 - 614878 + | type I secretion system ATPase TERM 567 615948 - 615926 - g 70 -4 -4.57073 | overlap 615930 CAGCCGGGGCAAAAA CTCATGGACA TCG TGCCCAAGGG CGCGCCGCTGCTGCT Ajs_0584 614930 - 616297 + | HlyD family type I secretion membrane fusion protein TERM 568 616352 - 616404 + G 75 -14 -3.25823 | gap 2, overlap 616357 CCTGAACCGCCTGGC GCGTGCCTGCGCCGCCTTGGCCGGCG TGG CGCTGGCCTGGCCGGC-CTGGT-CGC TTGATCTGCGCCAGG TERM 569 616693 - 616673 - g 71 -9 -3.78934 | gap 1 CCGGCCGTACAACAA CGC-CCTGG TCGA CCAGGCGCG GGCCCAGGTGGAGGA TERM 570 617555 - 617576 + G 74 -12.3 -3.55824 | gap 1, opp_overlap 617548 617546, overlap 617554 AAAGACGATGGCGCT GCGCGACCTG GCG CAGG-CGCGC TATTTGTACCTGCTG Ajs_0585 616302 - 617672 + | TolC family type I secretion outer membrane protein Ajs_0586 617710 - 618792 + | glycosyl transferase, group 1 Ajs_0587 618857 - 619957 + | glycosyl transferase family protein Ajs_0588 620027 - 620917 + | acetylglutamate kinase TERM 571 620957 - 620992 + F 100 -15.6 -5.40072 | gap 1, opp_overlap 620957, overlap 620959 GTATTGGAGTCAAAA TGGCTGC-AGCGCTTGT CCA GCAAGCGCTAGCAGCTA TTTTTTTGGAAGCGG TERM 572 620992 - 620957 - f 89 -12.7 -4.1899 | gap 1, opp_overlap 620957 620959 GTATTGGAGTCAAAA TGGCTGC-AGCGCTTG TCCAG CAAGCGCTAGCAGCTA TTTTTTTGGAAGCGG TERM 573 620959 - 620990 + F 100 -16 -4.34482 | gap 1, opp_overlap 620957, overlap 620957 ATTGGAGTCAAAATG GCTGC-AGCGCTTGT CCA GCAAGCGCTAGCAGC TATTTTTTTGGAAGC slmA 621110 - 621754 + | nucleoid occlusion protein Ajs_0590 623001 - 622021 - | transposase, IS4 family protein TERM 574 623115 - 623146 + H 79 -14 -3.40685 | opp_overlap 623121 623123, overlap 623121 ACCTGCGTGTTTTAT GCAAAATAGAACGA TCGT TCGTTTTATTTTGC TTCATGTCTCTTTCT TERM 575 623121 - 623140 + H 74 -5.8 -4.48333 | opp_overlap 623121 623123, overlap 623115 GTGTTTTATGCAAAA TAGAACGA TCGT TCGTTTTA TTTTGCTTCATGTCT Ajs_0591 623150 - 623815 + | TetR family transcriptional regulator Ajs_0592 623880 - 625676 + | acyl-CoA dehydrogenase domain-containing protein TERM 576 625918 - 625908 - g 70 -2.4 -4.58283 | overlap 625896 625909 625911 GAAGTCCCTCAAAAA GGAC GCC GACC CTGCCGCCACCTGCA Ajs_0593 625729 - 626163 + | hypothetical protein Ajs_0594 626264 - 628666 + | 3-hydroxyacyl-CoA dehydrogenase TERM 577 628740 - 628756 + G 70 -2.2 -4.57569 | CGCGCACGCCCATCG GCCGTT CGCAC AAGGGC TTTTTCCGCAACTAC Ajs_0595 628688 - 629884 + | acetyl-CoA acetyltransferase TERM 578 629913 - 629889 - f 76 -10 -3.90922 | gap 1, overlap 629890 AGCGCGTGTAAATAA GCGCCACTGCC GCGC GGCAGCG-CGC GGGGATTGCAGCCAA TERM 579 629999 - 630055 + G 85 -17.8 -2.70932 | gap 1, overlap 630034 TGGTCGATGGCGCAG TGCCGCTGGCGCTGCGCGTGTACGCGC CACG GCCCGGCCCCGCGC-GCGCCAGCGTCG TCATTGGCGGCGCCA TERM 580 630034 - 630087 + G 74 -12.4 -3.494 | gap 3, overlap 629999 TACGCGCCACGGCCC GGCCCCGCGCGCGCC-A-G-CGTCGTC ATT GGCGGCGCCATGGGCGTGCGCCAGGCC TTCTATGGGCCGTTC Ajs_0596 629965 - 630861 + | putative hydrolase Ajs_0597 630887 - 631729 + | hypothetical protein Ajs_0598 631747 - 632523 + | enoyl-CoA hydratase Ajs_0599 632703 - 633185 + | hypothetical protein TERM 581 633294 - 633316 + F 74 -5.5 -4.39166 | opp_overlap 633283, overlap 633283 633280 CGAACGGTTTGGTTA CCGTTCTTG CGTAA CAGGGGCGG TTTTGATCTGTGGCA Ajs_0600 633373 - 633927 + | hypothetical protein TERM 582 633952 - 633974 + T 100 -11.3 -5.40072 | gap 1 ACCCATCGCCGCCAG CGGGAG-GCC GTGA GGCGCTCCCG TTTTTTTACGGCGCG TERM 583 633997 - 634031 + T 73 -6.4 -4.2828 | gap 2, overlap 633997 ACGGCGCGACGCTTT C-GTCGCCCG-GCTTC CGAAT GGGGCGCGGGCGGCCG TTTTCGTCGATGGCC Ajs_0601 634411 - 633980 - | thioesterase superfamily protein Ajs_0602 634454 - 636265 + | ABC transporter related Ajs_0603 636320 - 636634 + | MazG nucleotide pyrophosphohydrolase TERM 584 636648 - 636690 + T 100 -22.2 -2.84051 | opp_overlap 636653, overlap 636653 GATGCGTGAGGCGTA AAAAAGCGGCTAGCGCCC GTGGTTA GGGCGCTAGCCGCTTTTG ATTTGATAGCGCTGG TERM 585 636653 - 636685 + T 100 -22.1 -4.58773 | opp_overlap 636653, overlap 636648 GTGAGGCGTAAAAAA GCGGCTAGCGCCC GTGGTTA GGGCGCTAGCCGC TTTTGATTTGATAGC TERM 586 636685 - 636653 - T 100 -22.1 -5.03314 | opp_overlap 636653 636648 GTGAGGCGTAAAAAA GCGGCTAGCGCCC GTGGTTA GGGCGCTAGCCGC TTTTGATTTGATAGC Ajs_0604 637779 - 636748 - | TRAP dicarboxylate transporter, DctP subunit Ajs_0605 639111 - 637813 - | TRAP dicarboxylate transporter, DctM subunit Ajs_0606 639698 - 639108 - | tripartite ATP-independent periplasmic transporter DctQ Ajs_0607 639927 - 640865 + | LysR family transcriptional regulator TERM 587 641290 - 641270 - g 73 -12.6 -3.38812 | opp_overlap 641266, overlap 641268 TGGTGCGCAAGAAGA CCGGCATG AAGAA CATGCCGG TGCAGTTGGTGCAGG Ajs_0608 641047 - 641937 + | extracellular solute-binding protein Ajs_0609 642060 - 642959 + | extracellular solute-binding protein TERM 588 642976 - 643006 + F 100 -19.1 -5.64873 | gap 1 CGGCTTGCATTGCAT CGCCCCTTC-GGCC TCTG GGCCCGAAGGGGCG TTTTTTGTTGTTGCG TERM 589 643176 - 643209 + G 79 -11.1 -3.98282 | gap 1, overlap 643177 ATCACCTACCTCGAC TGGATGCTGT-CAGCC TGG GGCTGGACGGTATCCG TTTCCTTGCTGTCGC Ajs_0610 643080 - 643832 + | polar amino acid ABC transporter, inner membrane subunit Ajs_0611 643834 - 644505 + | polar amino acid ABC transporter, inner membrane subunit Ajs_0612 644528 - 645265 + | ABC transporter related TERM 590 645478 - 645448 - T 100 -14 -4.28651 | opp_overlap 645450, overlap 645434 645449 AGCAAAAGGGCAAAA GGGCAAAAGGCGCC AAT GGCGCCTTTTGCTT TTATTTTGATAGCTG TERM 591 645477 - 645449 - T 89 -17.5 -3.16106 | opp_overlap 645450, overlap 645434 645448 GCAAAAGGGCAAAAG GGCAAAAGGCGCC AAT GGCGCCTTTTGCT TTTATTTTGATAGCT TERM 592 645450 - 645476 + T 100 -21 -5.13722 | opp_overlap 645434 645449 645448 CAAAAGGGCAAAAGG GCAAAAGGCGCC AAT GGCGCCTTTTGC TTTTATTTTGATAGC Ajs_0613 646527 - 645541 - | ornithine cyclodeaminase TERM 593 646691 - 646677 - H 100 -11.4 -5.11937 | AATAAGCGCAAAAAA CTGGCG TTT CGCCAG CAACCCGTGGCACTA Ajs_0614 646706 - 647137 + | AsnC family transcriptional regulator TERM 594 647140 - 647161 + T 74 -12.9 -3.37344 | opp_overlap 647131 GTACAAGCTGTGATC GCCCCGCCC GAGC GGGCGGTGC TTCATTGCATCGACG Ajs_0615 647819 - 647163 - | cytochrome c, class I Ajs_0616 648752 - 647916 - | HAD family hydrolase prfC 650395 - 648770 - | peptide chain release factor 3 TERM 595 650362 - 650376 + g 71 -9.2 -3.86897 | opp_overlap 650361 650362, overlap 650363 AGATGATGGCAAAAG TCCGGC GGC GCCGGG TTTCTGGGGCGTACG TERM 596 650611 - 650651 + H 81 -3.9 -5.0538 | opp_overlap 650602 AGCAACGACGCTCAC CCACGCCTTGCGG-TGCGG TGAGT CC-CATCCCCCAGGCGCGG TTTTTTCAGATACCC Ajs_0618 650682 - 652112 + | S-adenosyl-L-homocysteine hydrolase Ajs_0619 652225 - 653223 + | ribosomal RNA methyltransferase RrmJ/FtsJ Ajs_0620 653220 - 654059 + | 5,10-methylenetetrahydrofolate reductase Ajs_0621 654070 - 654753 + | hypothetical protein TERM 597 654803 - 654849 + F 75 -14.2 -2.78816 | GCCGGCGTGCTGTTG GCGGCCGTGCTGGCGGGTTGCG CGG CGCCACCCGCCGATGCGCCCCC TGTGGTAGCACCTGG Ajs_0622 654962 - 655489 + | rare lipoprotein A Ajs_0623 656424 - 655534 - | hypothetical protein Ajs_0624 656544 - 658526 + | protein kinase rplM 658680 - 659108 + | 50S ribosomal protein L13 Ajs_0626 659119 - 659511 + | ribosomal protein S9 TERM 598 659573 - 659588 + F 100 -11.8 -6.20267 | opp_overlap 659573 TGCAGACTGCAGAAA CCGCCC TTCG GGGCGG TTTTTTTGTTTTTGG TERM 599 659588 - 659573 - f 81 -11.8 -3.91144 | opp_overlap 659573 TGCAGACTGCAGAAA CCGCCC TTCG GGGCGG TTTTTTTGTTTTTGG TERM 600 659926 - 659904 - f 83 -9 -4.30576 | overlap 659912 TCTCCAGCACGAAAA GCAGGAAGCC GCG GGCAGCCTGC GCATAGCCGAGCAGG Ajs_0628 660423 - 660821 + | hypothetical protein Ajs_0629 660882 - 661256 + | iron-sulfur cluster insertion protein ErpA TERM 601 661277 - 661292 + T 100 -11.8 -5.28176 | opp_overlap 661275 661274 AGCCCATGAGAATCC GCCGCC TACG GGCGGC TTTTTTATGGCTGCG anmK 662440 - 661319 - | anhydro-N-acetylmuramic acid kinase Ajs_0631 663817 - 662453 - | peptidase M23B TERM 602 663692 - 663742 + g 100 -12.5 -4.33907 | gap 2, opp_overlap 663685 663681 663696, overlap 663693 CGAAGCCACTGCGAA GGCACCGCCGCCGCCGGTGAGCAGC AGG GTGGC-CAC-GGCGGCGGTGATGCG TTTTGGATGTTTCTG TERM 603 663693 - 663741 + g 78 -16 -3.1926 | gap 2, opp_overlap 663685 663681 663696, overlap 663692 GAAGCCACTGCGAAG GCACCGCCGCCGCCGGTGAGCAGC AGG GTGGC-CAC-GGCGGCGGTGATGC GTTTTGGATGTTTCT Ajs_0632 664011 - 665243 + | tyrosyl-tRNA synthetase TERM 604 665250 - 665272 + T 76 -12.7 -3.53224 | gap 1 CTGGCCTGACGCCCG GCGGG-GCGC GACC GCGCTCCCGC TTTGCCAAGCCACTG TERM 605 665281 - 665298 + T 100 -11.3 -5.16237 | CTCCCGCTTTGCCAA GCCACTG CGCG CAGTGGC TTTTTTCATGCCCTT Ajs_0633 665835 - 665314 - | hemerythrin-like metal-binding protein TERM 606 665957 - 665927 - R 100 -11.1 -5.52384 | TCCTGAGCAAAAAAA GCCAAGCGCGC CCGCCCATC GCGCGCTAGGC GCTATAAATAGAGGA Ajs_0634 666998 - 665988 - | LysR family transcriptional regulator Ajs_0635 667145 - 667591 + | hypothetical protein TERM 607 667651 - 667613 - f 100 -18.9 -3.74693 | opp_overlap 667614 667616, overlap 667614 GGCTATCGCATCAAA CTGGCTGCTAGCGCCCG CCATT CGGGCGCTAGCAGCTAT TTTTTTAGGAGCGAT TERM 608 667650 - 667614 - f 100 -22.4 -2.84602 | opp_overlap 667614 667616, overlap 667613 GCTATCGCATCAAAC TGGCTGCTAGCGCCCG CCATT CGGGCGCTAGCAGCTA TTTTTTTAGGAGCGA TERM 609 667614 - 667650 + F 100 -24.6 -5.40072 | opp_overlap 667613 667614, overlap 667616 GCTATCGCATCAAAC TGGCTGCTAGCGCCCG CCATT CGGGCGCTAGCAGCTA TTTTTTTAGGAGCGA TERM 610 667616 - 667648 + F 100 -25 -4.34482 | opp_overlap 667614 667613, overlap 667614 TATCGCATCAAACTG GCTGCTAGCGCCCG CCATT CGGGCGCTAGCAGC TATTTTTTTAGGAGC Ajs_0636 667783 - 669213 + | glucosamine-1-phosphate N-acetyltransferase / UDP-N-acetylglucosamine pyrophosphorylase Ajs_0637 669218 - 669988 + | histidine kinase Ajs_0638 670364 - 670023 - | MerR family transcriptional regulator Ajs_0639 671362 - 670367 - | heat shock protein DnaJ domain-containing protein TERM 611 671161 - 671180 + g 71 -12.8 -3.31144 | GTGCCTCGCGGCCCA GCGCGTCG TAGG CGGCGCGC TTCTCCGGGTCCGAC Ajs_0640 671979 - 671488 - | AsnC family transcriptional regulator Ajs_0641 672116 - 674026 + | D-fructose-6-phosphate amidotransferase TERM 612 674137 - 674167 + T 100 -13.2 -4.51197 | opp_overlap 674122 674121 674135 TCGGGGCAGAGGATC GCCCCGGGTCGG GCGCGAA CCGGCACGGGGC TTTTGGTTCGTTCTC Ajs_0642 674816 - 674181 - | NmrA family protein Ajs_0643 674932 - 675834 + | LysR family transcriptional regulator Ajs_0645 676689 - 677750 + | alcohol dehydrogenase Ajs_0646 678016 - 677747 - | translation initiation factor IF-1 Ajs_0647 678520 - 681933 + | multi-sensor hybrid histidine kinase TERM 613 682098 - 682111 + G 73 -9.5 -3.90112 | AGCGCCGGCTCCAGG CCGCG CTCA CGCGG TTTGATTGCGAGACG TERM 614 682695 - 682735 + G 91 -12.6 -4.25104 | gap 1, overlap 682686 682677 682695 GCGAGGCGCTGTGCC G-GCGTGGATTCCTGGGCC TGGG GGCCAAGGAATCCCTGCGC TTTTCCTCGCACGCG Ajs_0648 681977 - 682810 + | MCP methyltransferase, CheR-type Ajs_0649 682807 - 683406 + | CheB methylesterase Ajs_0650 683403 - 684551 + | response regulator receiver sensor signal transduction histidine kinase Ajs_0651 685020 - 684604 - | response regulator receiver protein Ajs_0652 685797 - 685135 - | DNA-N1-methyladenine dioxygenase Ajs_0653 685981 - 687555 + | AMP-dependent synthetase and ligase TERM 615 687883 - 687860 - g 77 -7.4 -4.39287 | gap 1, opp_overlap 687866, overlap 687849 GCAATCACAGCAAAA CCGCGAGGC CATCGCC GCC-CGCGG CGCGCAGTTGGGCTT Ajs_0654 687627 - 688289 + | DSBA oxidoreductase TERM 616 688304 - 688340 + T 71 -5.8 -4.27316 | overlap 688305 688306 ATGCTCTTTTATTGA TAGCTGGTAGCGCTTG CCCAT CAAGCGCTGCAGCCTG TTTTGGCTTGAAACC TERM 617 688364 - 688409 + T 90 -13.4 -4.07568 | TGAAACCTGTCAGCG CAGCGGGATCGGC-GTGCCC CGGTCCAC GGGCACGGCCG-TCACGCTG TTTTGCGGCGAGCCG Ajs_0655 688864 - 688358 - | CreA family protein TERM 618 688494 - 688459 - G 74 -15.4 -2.64735 | AGGTCAGGTACACCA GCGTGTTGCGCTTGGC GTCC ACCATGCGCACCACGC GCAGGCGCTTGAACA Ajs_0656 691446 - 688861 - | cyanophycin synthetase Ajs_0657 693724 - 691541 - | cyanophycin synthetase TERM 619 692087 - 692117 + g 79 -8 -4.52589 | overlap 692089 GTTGGTCAGCAGGCG GTGCGCGCCGGCCC AGT GGGCGGTGGCGCTC TTTTGTGTGCGGCGG TERM 620 692089 - 692115 + g 71 -9.2 -3.87627 | overlap 692087 TGGTCAGCAGGCGGT GCGCGCCGGCCC AGT GGGCGGTGGCGC TCTTTTGTGTGCGGC TERM 621 692611 - 692638 + g 70 -2.6 -4.60041 | gap 1 CGGGCGTCACGCCTT GGCGCTTGAGC TCCAGTT GCACG-GCGCC TTTTTCCACATCGAT TERM 622 694453 - 694502 + G 86 -16.6 -3.53761 | gap 2, overlap 694472 TGCACGGCCTGTGCG CGCCAGCAGGCGCCGCAGACATCC ACCT GGGTGT-TGTTGCGCCTG-TGGCG TTTCGCCAGGCCTTA TERM 623 694535 - 694524 - g 77 -3.6 -4.83615 | overlap 694525 CAGGCCTTACAAAAA GCAG CTGG CCGC GGGCTTCGCGCTCAC TERM 624 695412 - 695397 - g 70 -6 -4.18018 | opp_overlap 695407 TTCCGTCACGCAAAA GGCGGC AGCC GGCGCC AAGCGCATCTTCGAC Ajs_0658 694036 - 696288 + | ABC transporter related TERM 625 696783 - 696801 + G 93 -4.4 -5.26918 | CGCTGGACCGTGCAT CGCGCAAG TTG CTGGAGCG TTTTTTATAGCGTCT Ajs_0659 696305 - 696811 + | hypothetical protein Ajs_0660 697007 - 697447 + | hypothetical protein Ajs_0661 697925 - 697548 - | signal transduction protein Ajs_0662 698898 - 697957 - | 5-nucleotidase Ajs_0663 700124 - 698895 - | general secretion pathway protein F TERM 626 699194 - 699210 + g 73 -10.8 -3.64487 | GCGCGTCGAGTGCGT CCGCGC GCAGG GCGCGG TTGTTCAGCGTCTCG Ajs_0664 701217 - 700186 - | luciferase family protein Ajs_0665 701414 - 701938 + | hypothetical protein TERM 627 702019 - 702037 + T 72 -4.4 -4.56597 | overlap 702022 AAAACCCAGTCTTGG CAAGCGCG CCG CGCTCCTG TTTTTGAAAGGCGCC Ajs_0666 703457 - 702069 - | general secretory pathway protein E Ajs_0667 705815 - 703470 - | general secretion pathway protein D TERM 628 705682 - 705718 + g 77 -9.9 -3.93984 | overlap 705683 TTCAGCGTCACCGGC TCGCTGGGCCGCACGCT GCC GGCGCGCTGCCCGGAGG TTTGTGCATGAATTT Ajs_0668 706632 - 705820 - | putative general secretory pathway N transmembrane protein Ajs_0669 707194 - 706649 - | hypothetical protein TERM 629 706677 - 706725 + g 86 -16.5 -3.53012 | AGCGCCAGCACCAGC GTGCCGTCCCAGCGGACGGCGCC CGC GGCGGCGTTGGCGGGCGCGGCGC TTTGCACCAGGCGGG Ajs_0670 708420 - 707191 - | general secretion pathway L Ajs_0671 709625 - 708480 - | general secretion pathway protein K Ajs_0672 710305 - 709622 - | hypothetical protein Ajs_0673 710867 - 710475 - | general secretion pathway protein I TERM 630 710900 - 710888 - R 70 -10.5 -3.59979 | CGCCTGCACGGCAAA CGGGC GCA GCCCG TCGGTGGCCACGCGC Ajs_0674 711412 - 710864 - | general secretion pathway protein H Ajs_0675 711925 - 711446 - | general secretion pathway protein G Ajs_0676 711949 - 712398 + | hypothetical protein Ajs_0677 713066 - 712455 - | phosphoglycerate mutase Ajs_0678 713875 - 713063 - | cobalamin-5'-phosphate synthase TERM 631 713269 - 713238 - G 84 -13.1 -3.95022 | gap 1, opp_overlap 713238, overlap 713231 713257 GCGATCAATACCAAA GCGCCCAGCGCTTG ATATA CAAGCGCTAG-CGC CGGAAAACACCACAA TERM 632 713482 - 713444 - G 93 -18.8 -3.28924 | CAGCGCGCTGGACAA GCCGAGGTGGCCGAGCTG CGC CAGCAGGGCCACCTTGGC CTGCAGCGCCAGCAC Ajs_0679 715504 - 713942 - | threonine dehydratase TERM 633 715266 - 715316 + g 83 -14 -3.78934 | opp_overlap 715279, overlap 715268 GCGTGGTTGCCGGCC GA-GGCGCAGATCACGCCGCGCGC CAGCT GCTCG-GGCGAGAGCTGCGCCATC TTGTTGTAGGCGCCG TERM 634 715268 - 715313 + g 80 -16.8 -2.68545 | gap 1, opp_overlap 715279, overlap 715266 GTGGTTGCCGGCCGA GGCGCAGATCACGCCGCGCGC CAGCT GCTCG-GGCGAGAGCTGCGCC ATCTTGTTGTAGGCG TERM 635 715650 - 715627 - H 100 -11.7 -5.78622 | opp_overlap 715648 GCAGGGCAAAAAAAA GCCCCAAGC GGTAAA GCCTGGGGC TGAATCCATCCTTTG TERM 636 715974 - 715953 - g 71 -12.3 -3.29144 | gap 1 CGACCGTCCCGAGAA CGGCGGCCAG AAC CTGGCC-CCG CGTCCCATGGAGACC Ajs_0680 715828 - 716277 + | OsmC family protein Ajs_0681 716911 - 716294 - | putative ubiquinone biosynthesis protein Ajs_0682 717222 - 718310 + | porin TERM 637 718377 - 718348 - f 86 -15.1 -3.62695 | opp_overlap 718353, overlap 718353 CTTGGATAAAGAAGA CAAAACCGCTGCC TTCG GGCAGCGGTTTTT TTAGTTTGCAAAGGC TERM 638 718353 - 718372 + F 100 -15 -5.72207 | opp_overlap 718348 718353 ATAAAGAAGACAAAA CCGCTGCC TTCG GGCAGCGG TTTTTTTAGTTTGCA TERM 639 718372 - 718353 - f 100 -15 -4.86029 | opp_overlap 718353, overlap 718348 ATAAAGAAGACAAAA CCGCTGCC TTCG GGCAGCGG TTTTTTTAGTTTGCA Ajs_0683 718543 - 719667 + | porin TERM 640 719710 - 719729 + F 100 -11.4 -5.90981 | opp_overlap 719704 719710 719709, overlap 719696 TCAGCGAAACCAAAG CCGCTGTC TTCG GGCAGCGG TTTTTTTTCGTCTGC TERM 641 721266 - 721247 - f 75 -12.2 -3.59979 | opp_overlap 721247, overlap 721250 CGCCCCGATTTCAAA CAACCTCC TTCG GGAGGTTG TTTTTTTCTCGAAGT TERM 642 721247 - 721266 + F 100 -12.2 -5.61596 | opp_overlap 721247 721250 CGCCCCGATTTCAAA CAACCTCC TTCG GGAGGTTG TTTTTTTCTCGAAGT TERM 643 721263 - 721250 - f 71 -8.1 -3.9392 | opp_overlap 721247, overlap 721247 CCCGATTTCAAACAA CCTCC TTCG GGAGG TTGTTTTTTTCTCGA Ajs_0685 721449 - 723029 + | extracellular solute-binding protein Ajs_0686 723177 - 724160 + | binding-protein-dependent transport systems inner membrane component TERM 644 725179 - 725169 - g 70 -2.4 -4.63218 | GGTGGGCGAAGAAAA CGTG GAC CGCG ACCTGGAGCCGAGCA Ajs_0687 724162 - 725388 + | amidohydrolase TERM 645 725437 - 725476 + G 91 -9.4 -4.75372 | gap 1, opp_overlap 725437 GGTCTGGATGCGAAA TATGGC-CCTGGCGCTTGT ACT GCAAGCGCTAGCAGCTATA TTTTTGGTAGCTAAT Ajs_0688 725429 - 727000 + | extracellular solute-binding protein Ajs_0689 727047 - 727958 + | binding-protein-dependent transport systems inner membrane component TERM 646 728048 - 728087 + F 78 -9.8 -4.07568 | gap 1, overlap 728076 CAGCCCTCGCTGCGG CGCGGCGCGGCCGGCCCGG ACC CCTGCTCGGCTGC-CCTCG TTTTGGGGGGCGCCC Ajs_0690 728108 - 729124 + | oligopeptide/dipeptide ABC transporter, ATPase subunit Ajs_0691 729121 - 730155 + | oligopeptide/dipeptide ABC transporter, ATPase subunit TERM 647 732112 - 732138 + G 79 -13.1 -3.65522 | opp_overlap 732078 GCGGCGCGGCGCCTG GACATCGGCGT GCTGG ATGCCGATGTC TTCTTCAGCTACATC Ajs_0692 730333 - 732246 + | 5'-nucleotidase Ajs_0693 732325 - 732819 + | PBP family phospholipid-binding protein TERM 648 732905 - 732919 + T 78 -2.8 -4.98255 | overlap 732904 TCAAAGCAGGGCAGG CGGTAG CAG CTATTG TTTTTGTGCTTCGCC TERM 649 733011 - 732977 - T 83 -15.7 -3.16564 | GCCCCATCCCAGCAA CCGCC-GCGCAGCGGGC TTG GCCCGG-GCGCTGGCGG TGTCCCCCCTCCCGT Ajs_0694 733932 - 733087 - | RpiR family transcriptional regulator Ajs_0695 735401 - 733926 - | glucose-6-phosphate 1-dehydrogenase TERM 650 734232 - 734244 + g 85 -10.5 -4.25104 | opp_overlap 734232 734231 CTGGGCTTCGGAAAT GCGCG TGC CGCGC TTTTCCTGCCCCGCG TERM 651 734966 - 734976 + g 72 -8.2 -4.07568 | TGGAAGCCAAATCGT GCCC CAG GGGC TTTTCCAGCACCACG TERM 652 735191 - 735203 + g 76 -2.6 -4.87665 | opp_overlap 735177 AGCGTTCGAATTCTT CGTC GCTGG GGCG TTTTTCTCCCTCCAC TERM 653 736389 - 736433 + G 93 -17.8 -3.71378 | CTCGACCCCGAGGCG GCACGCCGCGTCGCGCTGCA GCCGG TGCAGTACGACGAGGCGGGC TTTCGCTATGCGCTC Ajs_0696 735597 - 736547 + | transaldolase B TERM 654 736642 - 736617 - g 71 -9.6 -3.78775 | opp_overlap 736620 736625 736638, overlap 736584 GTGCCCATTACGAAA GCGCCGGCCG CAGCTT CGACCTGCGC GCCGCATTTGCGCAG TERM 655 736843 - 736825 - g 70 -10.2 -3.73647 | opp_overlap 736824 736821 736820 736827 CCGACCGATCAACAA CACCGAGC AGC GCGCGGTG ATGCATTGGTTGTTG Ajs_0697 736544 - 738160 + | glucose-6-phosphate isomerase Ajs_0698 739357 - 738191 - | diguanylate cyclase TERM 656 739184 - 739211 + g 70 -10.6 -3.60627 | gap 1, opp_overlap 739177 739178 CACCGAAAGTGCCGC CCACCACC-GCAC AGC GTCCAGGTGGTGG TTTGCGCTGGGGTGG TERM 657 739461 - 739471 + r 91 -5.4 -5.252 | AATTATGCGAGGAGT GCAA AGC TTGC TTTTTTGTAGGGGTA TERM 658 739581 - 739561 - R 100 -16.9 -6.11644 | GCAGGCAAAAAAAAA CCCGCAAGC ACT GCTTGCGGG CTGGGGTGCTGCCTG groEL 741268 - 739628 - | chaperonin GroEL TERM 659 740260 - 740282 + g 73 -6.2 -4.41047 | overlap 740263 TGTCGGCAGCGGCAC CAGCGCCGTC GAT GATGGTGGTG TTTTCCTTGCCCACT Ajs_0700 741649 - 741359 - | chaperonin Cpn10 TERM 660 741712 - 741692 - R 78 -10.3 -4.04806 | overlap 741693 TGCGACATCAAACAA CGCGCCCTC AAC GCGGGCGCA GGGAACTGACACAGC Ajs_0701 742894 - 741860 - | cytidyltransferase-like protein TERM 661 742933 - 742921 - R 78 -3.3 -5.00616 | overlap 742925 TGTGTTCTCAAAAAA GTGAG CTG CTCGC GCTTGATGGATAAGC Ajs_0702 743846 - 742950 - | hypothetical protein TERM 662 743849 - 743874 + r 76 -13.2 -3.49176 | opp_overlap 743847, overlap 743848 743873 GCAGTGTAGGCAACT GCGGGGCCGC ATCCGG GCGGCACCGC TATTTGATGGCTTTG Ajs_0703 744059 - 743874 - | hypothetical protein Ajs_0704 744264 - 744190 - | hypothetical protein TERM 663 744766 - 744793 + r 83 -12.6 -3.85698 | GACGTGGGGTTCATA GCCCCGCCGCTG CGCG CAGCGCCTGGGC TTTGTGCCGCAAGGC Ajs_0705 746021 - 744840 - | S-adenosylmethionine synthetase Ajs_0706 746154 - 747029 + | lipid A biosynthesis acyltransferase Ajs_0707 747026 - 747898 + | lipid A biosynthesis acyltransferase TERM 664 747937 - 747902 - T 100 -9.9 -4.77036 | gap 1, opp_overlap 747935, overlap 747904 GTGTACCAGTAAAAA TGGCT-CTAGCGCTTA TCTGG TAAGCGCTAGCAGCTA CGAAAATCATAGTTC Ajs_0708 748873 - 747944 - | alpha/beta hydrolase fold TERM 665 748889 - 748925 + r 76 -6.4 -4.43012 | overlap 748890 748893 ACGCTACGCCTTTCA TAGCTGCCAGCGCTTG ATGGA CGGGCGCTGGCGTCAG TTTTGGTCTTCAGAT Ajs_0709 749710 - 748922 - | GTP-binding protein, HSR1-related TERM 666 749866 - 749821 - g 75 -9.7 -4.07568 | gap 1, overlap 749805 CCCGGCGCCGCAAAA GGCAGCGAAGCCTGATCTCG TGAAGGG CGAGGCCAG-CTACGCCGCC GTGTGCGCCGCCTGC Ajs_0710 749729 - 750367 + | cytochrome c, class I TERM 667 750438 - 750466 + F 100 -13.2 -4.4648 | gap 1, opp_overlap 750425 750436 ATCGCACCCAAGACG GGCGGGCTCATCT GAAC GGATG-GCCCGCC TTTTCTCATGGGCCT Ajs_0711 750536 - 752689 + | ResB family protein Ajs_0712 752686 - 754020 + | cytochrome c assembly protein Ajs_0713 754112 - 755110 + | putative sulfite oxidase subunit YedY TERM 668 755635 - 755652 + G 76 -2.5 -4.87665 | opp_overlap 755608, overlap 755637 GTGTACCTGGCCGCG GGGCTGG CGAT CCTGCAC TTTTTCTGGATGCGG TERM 669 755703 - 755721 + G 71 -12.4 -3.22298 | overlap 755685 755704 CGAGGTGGCGGTCTA TGCCGCCA TCC TGGCGGCG TTGCTGCTCGCTCGG Ajs_0714 755110 - 755769 + | ferric reductase domain-containing protein TERM 670 755785 - 755821 + T 77 -4.3 -4.84017 | overlap 755785 755786 TTGCTATTATTTGGA TAGCTGCTAGCGCTTTC TGG GTAAGCGCTAGAGCCGA TTTTTATCAAACCTT Ajs_0715 756672 - 755836 - | beta-lactamase domain-containing protein Ajs_0716 758032 - 756737 - | diaminopimelate decarboxylase Ajs_0717 758238 - 758029 - | hypothetical protein TERM 671 758268 - 758284 + r 100 -10.8 -5.0133 | opp_overlap 758268 TTTCGACCCTTGAAA GCCCGC ACCCA GCGGGC TTTTTTACGCACCTC TERM 672 758284 - 758268 - R 73 -10.8 -3.55444 | opp_overlap 758268 TTTCGACCCTTGAAA GCCCGC ACCCA GCGGGC TTTTTTACGCACCTC Ajs_0718 758882 - 758289 - | resolvase domain-containing protein Ajs_0719 760180 - 758978 - | zonular occludens toxin TERM 673 759707 - 759728 + g 79 -4.3 -4.72272 | GTACTTACTAAAAAT GTGCTTCGG AAGC CTGTAGCGC TTTTTGATCGGCGCA Ajs_0720 760476 - 760177 - | hypothetical protein Ajs_0721 761777 - 760473 - | hypothetical protein TERM 674 761167 - 761186 + g 75 -9.3 -4.15565 | ACTGGGACATATTTA TCAGGGG TTTCGT CCCCTGA TTTTCGCGTACTCAG Ajs_0722 761952 - 762320 + | hypothetical protein Ajs_0723 763147 - 762839 - | putative phage associated protein Ajs_0724 764274 - 763180 - | replication initiation factor TERM 675 764333 - 764355 + r 73 -12.7 -3.19192 | gap 1 CGGGGGGGCATCGAT GCGCGG-CGC GCCC GCGTCCGCGC TTCGCTTGCATGACG Ajs_0725 765123 - 764839 - | hypothetical protein Ajs_0726 765865 - 765338 - | hypothetical protein TERM 676 765647 - 765637 - G 89 -5.4 -5.18726 | opp_overlap 765637 CCGGCACAAGAAAAA CATC GTC GATG TTCTCAGGCTCGATG Ajs_0727 765868 - 766161 + | hypothetical protein Ajs_0728 766161 - 766490 + | frataxin family protein Ajs_0729 768950 - 766566 - | 1A family penicillin-binding protein Ajs_0730 769214 - 770284 + | type IV pilus assembly protein PilM TERM 677 770357 - 770395 + G 72 -5.2 -4.30833 | overlap 770354 770359 TTCAAGCCATCATGC TCGCTTCAGCATTGGTAG GCC TTGCCATTGCTGCGGCTA TTTATTGGTGGTTTC Ajs_0731 770281 - 770892 + | fimbrial assembly family protein Ajs_0732 770894 - 771568 + | pilus assembly protein, PilO Ajs_0733 771565 - 772116 + | pilus assembly protein, PilQ Ajs_0734 772113 - 774203 + | type IV pilus secretin PilQ TERM 678 774226 - 774246 + F 100 -16.9 -5.10461 | GTTCAGTTGGTTCGA CAGGGGGTG GTT CACCCCCTG TTTTTATTGGGTAGA TERM 679 774565 - 774575 + G 79 -6.8 -4.64676 | opp_overlap 774556, overlap 774562 GAAGCACGGCTGCGA CCGT AGG ACGG TTTTATTCGCGCTGG Ajs_0735 774275 - 775378 + | 3-dehydroquinate synthase Ajs_0736 775436 - 776608 + | deoxyguanosinetriphosphate triphosphohydrolase-like protein Ajs_0737 776682 - 777245 + | hypothetical protein TERM 680 777292 - 777344 + T 91 -16.1 -3.59979 | opp_overlap 777293 777294, overlap 777293 TTGGCGTGTTGTTAA ATGCGATGGGCAAGCCGCGCAGGGC GTA GCCCGTAGCGGCTTGCCCATCACCG TTTCCGATCAGAAGG TERM 681 777343 - 777293 - T 100 -21.8 -3.53012 | opp_overlap 777292 777293, overlap 777294 TGGCGTGTTGTTAAA TGCGATGGGCAAGCCGCGCAGGGC GTA GCCCGTAGCGGCTTGCCCATCACC GTTTCCGATCAGAAG TERM 682 777293 - 777343 + T 90 -19.6 -2.75844 | opp_overlap 777293 777294, overlap 777292 TGGCGTGTTGTTAAA TGCGATGGGCAAGCCGCGCAGGGC GTA GCCCGTAGCGGCTTGCCCATCACC GTTTCCGATCAGAAG TERM 683 777342 - 777294 - T 100 -25.3 -2.71712 | opp_overlap 777293 777292, overlap 777293 GGCGTGTTGTTAAAT GCGATGGGCAAGCCGCGCAGGGC GTA GCCCGTAGCGGCTTGCCCATCAC CGTTTCCGATCAGAA Ajs_0738 778173 - 777352 - | IstB ATP binding domain-containing protein Ajs_0739 779695 - 778163 - | integrase catalytic subunit Ajs_0740 779743 - 780510 + | hypothetical protein TERM 684 782112 - 782134 + G 78 -9.9 -4.05788 | gap 1 CCGCGTCCGCGCTGC CG-CTGCTGG ACCG CCAGCAGGCG TTTGGTTTCACGCAG Ajs_0741 780692 - 785425 + | glutamate synthase (NADH) large subunit TERM 685 785972 - 785924 - g 80 -9.4 -4.17958 | overlap 785913 AAGACGGGCAAGAAA GTGGCCGTGGTGGGCGCC-GGCCC GGC GGGCCTGGCGGCCGCG-CAGCAAC TGGCGCGCGCCGGGC gltD 785489 - 786967 + | glutamate synthase subunit beta TERM 686 787035 - 787070 + F 100 -15.4 -5.1675 | opp_overlap 787044, overlap 787038 CTGCTTACCCGTCGA CCGGCACAACGGCGCC CTGG GGCGCCGTTGTGCTTA TTTTTTGATAGCTGC TERM 687 787038 - 787067 + F 100 -23.7 -4.67552 | opp_overlap 787044, overlap 787035 CTTACCCGTCGACCG GCACAACGGCGCC CTGG GGCGCCGTTGTGC TTATTTTTTGATAGC TERM 688 787061 - 787044 - f 77 -14.1 -3.31144 | opp_overlap 787038 787035 CGTCGACCGGCACAA CGGCGCC CTGG GGCGCCG TTGTGCTTATTTTTT TERM 689 787193 - 787244 + F 100 -16.5 -4.3255 | gap 1, overlap 787190 787225 AATTCAGGGATTGCC CGGTCATGGGCTTGCTGCGCGACC TTCCT GGTCGAGCGGCGTGCCCG-GGCCG TTTGTTCGTTCCGAC TERM 690 788040 - 788007 - g 73 -13.1 -3.33261 | gap 1, overlap 788028 CGGCAAGCTGGACAA GGCGCTGGCCGACATG AAG CAGGACGGC-AGCGCC GCCAAGATTGCCGAG Ajs_0743 787198 - 788085 + | extracellular solute-binding protein Ajs_0744 788263 - 788916 + | polar amino acid ABC transporter, inner membrane subunit Ajs_0745 788897 - 789679 + | ABC transporter related TERM 691 789860 - 789819 - T 100 -10.1 -5.0133 | gap 1, overlap 789821 789823 CAGGGGCTTAAAAAA GATAGCTGCC-AGCGCTCGC CCA GCAAGCGCTAGGCGGCGATT GGGCTAGACATTACG TERM 692 789858 - 789821 - T 89 -12.7 -4.13561 | gap 1, overlap 789819 789823 GGGGCTTAAAAAAGA TAGCTGCC-AGCGCTCGC CCA GCAAGCGCTAGGCGGCGA TTGGGCTAGACATTA TERM 693 789856 - 789823 - T 86 -15.3 -3.66166 | gap 1, overlap 789821 789819 GGCTTAAAAAAGATA GCTGCC-AGCGCTCGC CCA GCAAGCGCTAGGCGGC GATTGGGCTAGACAT Ajs_0746 790833 - 789871 - | spermidine synthase TERM 694 790150 - 790132 - G 70 -11.7 -3.4252 | GCCCATGCACCACAA CGTGCCG TACAG CGGCACG TACTGCAGGTAGGGC TERM 695 790779 - 790768 - G 72 -7.2 -4.18018 | GTCGCTTAGGTAAAA GCCG AAGT CGGC GTTCAGGCGCTCGGC Ajs_0747 791243 - 790833 - | S-adenosylmethionine decarboxylase related TERM 696 791318 - 791284 - H 76 -10.7 -3.72576 | gap 2 GGGGGTGGCAGGAAA CGGCGCCGCGGTCGGAC GCC GTCCG-CCG-GGTACCG ACCAGCACGCTGCCG Ajs_0748 791607 - 792467 + | ABC transporter related Ajs_0749 792464 - 793246 + | hypothetical protein Ajs_0750 793281 - 793766 + | hypothetical protein Ajs_0751 793763 - 794515 + | VacJ family lipoprotein Ajs_0752 794694 - 795341 + | toluene tolerance family protein Ajs_0753 795372 - 795641 + | sulfate transporter/antisigma-factor antagonist STAS Ajs_0754 795807 - 796895 + | transposase, IS4 family protein Ajs_0755 797064 - 797981 + | ABC transporter related Ajs_0756 797978 - 798733 + | ABC-2 type transporter Ajs_0757 798735 - 798983 + | BolA family protein Ajs_0758 799175 - 800527 + | UDP-N-acetylglucosamine 1-carboxyvinyltransferase hisG 800524 - 801174 + | ATP phosphoribosyltransferase catalytic subunit TERM 697 801285 - 801308 + F 71 -5.2 -4.5123 | gap 1 GTGGCCGGGCACCCC TCGGC-TTCCG CAA CGGCGCGCCGA TTTCTTTCGTACATT TERM 698 801369 - 801397 + G 70 -3.7 -4.56775 | overlap 801383 GCTCCCGTCCGCCTG TCCACCGCTGACG ACA CTTTCGAGGTGGA TTTTTCCGCGCGCCT TERM 699 801678 - 801668 - g 74 -2.4 -4.84359 | CGAGGCGCAGAAAAA GGCC AAT GGCG AAAGCTGGAGCTACC TERM 700 801885 - 801872 - g 77 -3.7 -4.7373 | overlap 801873 CCAGGGCACCAAAAA CCCGC TGGT GCTGG CCGCGGCGCATGTGG Ajs_0760 801339 - 802658 + | histidinol dehydrogenase TERM 701 802683 - 802708 + F 75 -11.9 -3.64716 | opp_overlap 802687, overlap 802679 802687 CAGCCTGTACGCCTA CCAAGCCACCT TGCG AGGTGGCTTTG TCTTTTCAAAAATGA TERM 702 802687 - 802704 + F 95 -11.3 -4.45168 | opp_overlap 802687, overlap 802679 802683 CTGTACGCCTACCAA GCCACCT TGCG AGGTGGC TTTGTCTTTTCAAAA TERM 703 802820 - 802774 - f 83 -11.8 -4.02999 | opp_overlap 802789, overlap 802783 GAAAAACACATCAAA CTCATTAAACACGAATTTCGTG TCA CACGAAATTCGTGTACGATAAA CGCATGAAGAACGTC TERM 704 802811 - 802783 - f 100 -19.1 -3.82499 | opp_overlap 802789, overlap 802774 ATCAAACTCATTAAA CACGAATTTCGTG TCA CACGAAATTCGTG TACGATAAACGCATG Ajs_0761 802824 - 803525 + | hypothetical protein TERM 705 804100 - 804067 - g 75 -11.6 -3.65046 | GGCCTATCCCAACAA CCCCACGGCCACGC TGTGGG ACGAGGCCGTGGTG CAGCGCATCATCGAC Ajs_0762 803564 - 804670 + | histidinol-phosphate aminotransferase Ajs_0763 804667 - 805299 + | imidazoleglycerol-phosphate dehydratase TERM 706 805986 - 805966 - g 88 -10.3 -4.38712 | TCCACCCGGAGAAAA GCGCCGAGC ACG GCCTGGCGC TGTACCGCAACTTCT Ajs_0764 805350 - 806018 + | imidazole glycerol phosphate synthase subunit hisH Ajs_0765 806044 - 806820 + | 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase Ajs_0766 808023 - 806827 - | hypothetical protein Ajs_0767 809464 - 808091 - | putative transmembrane protein Ajs_0768 810996 - 809464 - | glycosyl transferase, group 1 Ajs_0769 811994 - 810993 - | putative transmembrane protein Ajs_0770 813381 - 811987 - | putative transmembrane protein TERM 707 812076 - 812095 + g 70 -11.4 -3.4252 | opp_overlap 812067, overlap 812067 GGAAGATGCCGGCCT GGGCCAGC GATT GCTGGCTC TTGTGCTGCATCCAG TERM 708 813313 - 813328 + g 82 -11.8 -4.07885 | overlap 813298 GCCCGTGCCTGGGAG CGCCCG TGGA CGGGCG TTTTCACCGGCCGTC Ajs_0771 813943 - 813389 - | putative lipoprotein Ajs_0772 817855 - 813965 - | TPR repeat-containing protein TERM 709 816581 - 816611 + gr 74 -12.7 -3.28924 | gap 1, overlap 816569 CTGCCAGGCGGCGTC CTGGTTCGT-CTGG CGCG CCAGGACGAGCCAG TTCTCCAGCGCGATG Ajs_0773 820646 - 817815 - | polysaccharide deacetylase Ajs_0774 820825 - 821835 + | UDP-galactose 4-epimerase Ajs_0775 821876 - 822655 + | imidazole glycerol phosphate synthase subunit hisF TERM 710 822748 - 822721 - f 91 -4.8 -5.31456 | gap 1, overlap 822722 GTAAGCTATAAAAAA TGCAGCGCACATC GGC GTTGTG-GCTGCC GATGACCGACAATGG Ajs_0776 822760 - 823158 + | phosphoribosyl-AMP cyclohydrolase TERM 711 823530 - 823515 - g 79 -6.8 -4.67982 | overlap 823517 CGGCATCGAAGAAAA GGCCCT GCGC AAGGCC GCAGCCCGCAGCAGC Ajs_0777 823165 - 823563 + | phosphoribosyl-ATP pyrophosphatase TERM 712 823815 - 823839 + G 90 -4.1 -5.42198 | overlap 823816 GCCGGCGTGCTGTAC GCGGTCACTGC GCC GCTGTGGCTGG TTTTCTTTTTTCCGG Ajs_0778 823563 - 823949 + | putative transmembrane protein Ajs_0779 823942 - 824982 + | patatin Ajs_0780 825022 - 825381 + | histidine triad (HIT) protein Ajs_0781 825484 - 825732 + | twin arginine-targeting protein translocase tatB 825765 - 826244 + | sec-independent translocase Ajs_0783 826307 - 827095 + | Sec-independent protein translocase TatC TERM 713 827209 - 827173 - T 100 -21.1 -5.28942 | opp_overlap 827173 GAGCGGAAACAAAAA TAGCTTCCCGCGCTT TGTAGAT AAGCGCGGGAAGCTA TTTTTTTAATAGCAA TERM 714 827173 - 827209 + T 100 -21.1 -5.52384 | opp_overlap 827173 GAGCGGAAACAAAAA TAGCTTCCCGCGCTT TGTAGAT AAGCGCGGGAAGCTA TTTTTTTAATAGCAA Ajs_0784 828370 - 827231 - | peptidase S1 and S6, chymotrypsin/Hap Ajs_0785 829849 - 828506 - | ferric reductase domain-containing protein Ajs_0786 829990 - 830754 + | hypothetical protein Ajs_0787 830832 - 831887 + | 4-hydroxythreonine-4-phosphate dehydrogenase TERM 715 831908 - 831937 + T 100 -20 -4.57073 | opp_overlap 831908 TCCCTGAAATGCAAA GGCCCGCCGCCC CAGGAA GGGCGGTGGGCC TTTTTACGCGCCCTC TERM 716 831937 - 831908 - T 100 -18.5 -3.84451 | opp_overlap 831908 TCCCTGAAATGCAAA GGCCCGCCGCCCC AGGA AGGGCGGTGGGCC TTTTTACGCGCCCTC Ajs_0788 832391 - 831963 - | large conductance mechanosensitive channel protein Ajs_0789 832526 - 833125 + | ubiquinol-cytochrome c reductase, iron-sulfur subunit Ajs_0790 833141 - 834562 + | cytochrome b/b6 domain-containing protein Ajs_0791 834579 - 835334 + | cytochrome c1 TERM 717 835381 - 835404 + F 100 -16.8 -4.77757 | opp_overlap 835383 TGCCGAGCATGTACA GAGTGGGTGC CCTG GCACCCACTC TTTTGATTTTTAGGA TERM 718 835402 - 835383 - f 74 -13.6 -2.92463 | opp_overlap 835381 CCGAGCATGTACAGA GTGGGTGC CCTG GCACCCAC TCTTTTGATTTTTAG Ajs_0792 835430 - 836041 + | glutathione S-transferase domain-containing protein Ajs_0793 836065 - 836601 + | stringent starvation protein B TERM 719 836746 - 836771 + T 100 -15.5 -5.10933 | opp_overlap 836730 GGCACCATTGCACAG GCCGCATGTTC GCAG GGACATGCGGC TTTTCTTTTGCGTGC Ajs_0794 837143 - 836844 - | hypothetical protein Ajs_0795 837194 - 838144 + | peptidase M23B TERM 720 838801 - 838777 - g 77 -5.5 -4.63218 | overlap 838780 GCCCCGCGAAGAAAA GCAGGCCGCCT ACC AGGCGGACATC ACCTACGGAACGAAC Ajs_0796 838280 - 841033 + | preprotein translocase subunit SecA TERM 721 841072 - 841049 - f 89 -16.8 -3.44146 | opp_overlap 841045 841044 841054, overlap 841052 TGCCGGCACAATGAA GAACACGGGC TGCG GCCCGTGTTC GCACTTTGGCAGTGC TERM 722 841069 - 841052 - f 83 -12.7 -3.8591 | opp_overlap 841045 841044 841054, overlap 841049 CGGCACAATGAAGAA CACGGGC TGCG GCCCGTG TTCGCACTTTGGCAG TERM 723 841433 - 841481 + G 83 -12.4 -4.07885 | gap 2, overlap 841433 TGCGCGCGCCACCTG CG-AGGCAC-TGGCTGGCCACCTG GGT CTGGCGGCCAGCCAGGTGCTGCCG TTTTCCACCGGCGTC TERM 724 841697 - 841721 + G 72 -12.9 -3.14211 | CGCGGGCATGATCCG CCCCAACATGG CGA CCATGTTGGGC TTCCTGGCCACGGAT TERM 725 841876 - 841862 - g 73 -12.8 -3.35996 | overlap 841832 GATGGCCACGCACAA GGCGCG GCA CGCGCC CATCACCTCCCTCGA argJ 841134 - 842363 + | bifunctional ornithine acetyltransferase/N-acetylglutamate synthase protein Ajs_0798 842418 - 843296 + | hypothetical protein Ajs_0799 843293 - 843739 + | NUDIX hydrolase TERM 726 843760 - 843794 + T 95 -10.7 -4.66987 | opp_overlap 843759 843757 843755 843761, overlap 843761 TGCTTCAAAATACAT AGCTGCTTGCGCTTG CTGGA TAAGCGCTAGCAGCC TTTTCTTCAAATATC TERM 727 843761 - 843793 + T 82 -14.2 -3.39469 | opp_overlap 843759 843757 843755 843761, overlap 843760 GCTTCAAAATACATA GCTGCTTGCGCTTG CTGGA TAAGCGCTAGCAGC CTTTTCTTCAAATAT TERM 728 843793 - 843761 - T 77 -13.5 -3.26779 | opp_overlap 843761 843760, overlap 843759 843757 843755 GCTTCAAAATACATA GCTGCTTGCGCTT GCTGGAT AAGCGCTAGCAGC CTTTTCTTCAAATAT Ajs_0800 844038 - 843808 - | hypothetical protein Ajs_0801 844800 - 844045 - | hypothetical protein TERM 729 844482 - 844492 + g 72 -8.2 -4.1466 | overlap 844469 CGGTCAACGCCTGGC CGGC CTT GCCG TTTTGCGCGTTGAGT Ajs_0802 845514 - 844891 - | dephospho-CoA kinase Ajs_0803 846397 - 845516 - | type 4 prepilin peptidase 1. Aspartic peptidase. MEROPS family A24A TERM 730 845994 - 845982 - G 71 -9.1 -3.85817 | AGCGCGGCCGAGAAA CCGCA CCA TGCGG CGGTCGTGAGGCTCC Ajs_0804 847614 - 846397 - | type II secretion system protein TERM 731 847067 - 847047 - G 75 -6.9 -4.3534 | CGGGAATCACGAAAA TCATGATGA TCG TCACCACGA CAAACGCAACGATGA TERM 732 847602 - 847616 + g 73 -4.2 -4.62471 | TGATGCCCCTCGCTG CAACGG TCG CCATTG TTTTCTCTCTCGATT Ajs_0805 849368 - 847635 - | type IV-A pilus assembly ATPase PilB TERM 733 848958 - 848994 + g 72 -5.1 -4.38154 | GTCATATTCCGCGAT GATCCAGTCCACCCC CATTTGT GTGGTGAACTTGATC TTTTCTGCGGCCTCT Ajs_0806 850765 - 849677 - | transposase, IS4 family protein TERM 734 850914 - 850898 - H 100 -11.5 -5.1287 | TCCAGATGCAAAAAA GCCCCGC GAT GCAGGGC TTGGGCATGAAAATA Ajs_0807 851174 - 852145 + | phage integrase family protein Ajs_0808 854816 - 852387 - | hypothetical protein TERM 735 853908 - 853896 - G 70 -6.2 -4.19624 | CACCTCGAAGAGAAA GCGC AGGTA GCGC ACGCATTCTTCGTCG Ajs_0809 856525 - 854813 - | hypothetical protein TERM 736 855049 - 855004 - G 73 -4 -4.62069 | gap 2, opp_overlap 855040, overlap 855006 855044 GTTTGACTTCAAAAA CT-GCATTGCT-CAGCGCGGCG TTGG CGCCGAGGGATAGCAATGCCAG GTTGGCAATGCTGTG TERM 737 855713 - 855725 + g 77 -10.5 -3.9122 | GTGATACGCCGGCGC GCCCG TGG CGGGC TTCTTTGCCAGGGTA Ajs_0810 857519 - 856530 - | hypothetical protein TERM 738 857190 - 857175 - G 72 -4.6 -4.56597 | opp_overlap 857187 GGCCTGGCTGAAAAA GCCGTC CATG GACTGC ATCAGCCGCGCTGGC Ajs_0812 859154 - 858831 - | hypothetical protein Ajs_0813 859586 - 859200 - | hypothetical protein Ajs_0814 860401 - 859583 - | hypothetical protein TERM 739 859657 - 859669 + g 71 -3.3 -4.69664 | GCATCAGTTGTGCAA TCCGG TAG CCGAA TTTTTGGATGCTGTC TERM 740 860435 - 860417 - R 71 -4.6 -4.4715 | CCTCAAGGTAGAAAA TCTGAG GGCATGG CTCAGA GGGTTTTGCGATGTT Ajs_0815 860752 - 860555 - | hypothetical protein TERM 741 860973 - 860989 + G 74 -8 -4.28548 | TCATCCGGCGTGGCT GCGACA AAATG TGTCGC TTTTCGTGGGTGACT Ajs_0816 860849 - 861205 + | hypothetical protein Ajs_0817 862336 - 861284 - | silent information regulator protein Sir2 TERM 742 861747 - 861760 + g 71 -9.5 -3.87815 | TCGTAGATGCGGGCG GCCGG GAAA CCGGC TTTGTGAAAGTGCCC Ajs_0819 863497 - 862937 - | hypothetical protein TERM 743 863012 - 863030 + gH 82 -5.9 -4.84363 | overlap 863014 863017 AACCTCAGATGCCGC GCCGACC AGCAA GGTCGTC TTTTTGCTGGTTTGC TERM 744 863272 - 863243 - GH 76 -11.4 -3.75105 | TGAAGGCATCAAGAA GCCATCCGCCCC TTTGAT GAGGCCGATGGC GCGGAGCTTGGATTC Ajs_0820 863497 - 863796 + | hypothetical protein Ajs_0821 864744 - 863779 - | hypothetical protein Ajs_0822 864799 - 865080 + | hypothetical protein Ajs_0823 865077 - 865787 + | metallophosphoesterase TERM 745 866003 - 866041 + GT 100 -17 -5.0538 | overlap 865960 865959 ATCTGACCCAGCGGC CCCATTCTTTGTGCTG CATGCCA TAGCACAAAGAATGGG TTTTTTGCACTGGGG Ajs_0824 865756 - 866028 + | hypothetical protein Ajs_0825 867232 - 866414 - | hypothetical protein Ajs_0826 868051 - 867344 - | DNA ligase III-like protein Ajs_0827 868584 - 868057 - | hypothetical protein Ajs_0828 869978 - 868581 - | hypothetical protein Ajs_0829 871635 - 870052 - | chromosome segregation ATPase-like protein TERM 746 871588 - 871640 + g 86 -16.1 -3.59979 | opp_overlap 871589 871590, overlap 871589 TTGGCGTGTTGTTAA ATGCGATGGGCAAGCCGCGCAGGGC GTA GCCCGTAGCGGCTTGCCCATCACCG TTTCCGATCAGAAGG TERM 747 871589 - 871639 + g 93 -19.6 -2.75844 | opp_overlap 871589 871590, overlap 871588 TGGCGTGTTGTTAAA TGCGATGGGCAAGCCGCGCAGGGC GTA GCCCGTAGCGGCTTGCCCATCACC GTTTCCGATCAGAAG TERM 748 871639 - 871589 - G 100 -21.8 -3.53012 | opp_overlap 871589 871588, overlap 871590 TGGCGTGTTGTTAAA TGCGATGGGCAAGCCGCGCAGGGC GTA GCCCGTAGCGGCTTGCCCATCACC GTTTCCGATCAGAAG TERM 749 871638 - 871590 - G 100 -25.3 -2.71712 | opp_overlap 871589 871588, overlap 871589 GGCGTGTTGTTAAAT GCGATGGGCAAGCCGCGCAGGGC GTA GCCCGTAGCGGCTTGCCCATCAC CGTTTCCGATCAGAA Ajs_0830 872469 - 871648 - | IstB ATP binding domain-containing protein Ajs_0831 873991 - 872459 - | integrase catalytic subunit Ajs_0832 874993 - 874052 - | DEAD-like helicases-like Ajs_0833 880312 - 875015 - | DEAD/DEAH box helicase domain-containing protein TERM 750 875177 - 875152 - G 77 -3.1 -4.87665 | opp_overlap 875176 CCGGAGTGAGAAAAA CCAGTGCGCGG GCTG CCTTGTACTGG GCTGCGGCGGTGGCT TERM 751 878012 - 878026 + g 81 -4.2 -5.04249 | overlap 878014 ACGGTCAGCCGGTTT GAGCTT GGC AAGCAC TTTGTTTTTTGCGAA Ajs_0834 881367 - 880327 - | filamentation induced by cAMP protein Fic Ajs_0835 882671 - 881907 - | IstB ATP binding domain-containing protein Ajs_0836 884263 - 882668 - | integrase catalytic subunit TERM 752 882933 - 882915 - G 70 -11.7 -3.48276 | GCGGCGTTGACACAA TGCGCCG GATAT CGGCGCA CCAGGCCGACGATGC TERM 753 883972 - 883934 - G 72 -11.6 -3.53444 | GTACTGGCCGGCAAA GCCGTGGACATCGACCAG GTC CTGGTAGATGGCCGTGGC GTTGCGCTTGAGACG Ajs_0837 884366 - 884896 + | hypothetical protein TERM 754 885080 - 885091 + T 80 -5.8 -4.67904 | CATGGCATCCAGGAT CGCT CGGC AGCG TTTTTCCAATTCCTG Ajs_0838 886035 - 885127 - | plasmid encoded RepA protein Ajs_0839 886782 - 886444 - | hypothetical protein TERM 755 886956 - 887003 + r 74 -10.1 -3.78953 | gap 1, opp_overlap 886928 886968, overlap 886957 886968 GGCATGAATGACGAT TCAAAGCAAAAAGCCCAAGTGA TTGAT TCACATGGGCTTTTT-CTGTGG TTTCCTGGTCGGGGT TERM 756 886968 - 886992 + r 100 -10 -5.06585 | opp_overlap 886968, overlap 886957 886956 GATTCAAAGCAAAAA GCCCAAGTGA TTGAT TCACATGGGC TTTTTCTGTGGTTTC TERM 757 886992 - 886968 - R 100 -10 -5.00138 | opp_overlap 886968 886957 886956 GATTCAAAGCAAAAA GCCCAAGTGA TTGAT TCACATGGGC TTTTTCTGTGGTTTC Ajs_0840 888094 - 887111 - | dimethylallyltranstransferase TERM 758 888317 - 888287 - g 91 -9.7 -4.83169 | gap 1 ACGCGGTCATAAAAA CCGGCGGCAA-GCA GTAT CGCGTTGCCGCTGG CGAAAAAATCAAGGT Ajs_0841 888268 - 888579 + | 50S ribosomal protein L21P rpmA 888595 - 888852 + | 50S ribosomal protein L27 TERM 759 888875 - 888906 + F 100 -21.8 -4.08767 | opp_overlap 888875 888878 888882, overlap 888878 888882 TCGCCGCTGAAGCGA CAACAAAGCCCCGA CCCG TCGGGGCTTTGTTG TTTTCAGCGCCTGGC TERM 760 888906 - 888875 - f 100 -21.8 -2.52464 | opp_overlap 888875 888878 888882, overlap 888878 888882 TCGCCGCTGAAGCGA CAACAAAGCCCCGA CCCG TCGGGGCTTTGTTG TTTTCAGCGCCTGGC TERM 761 888903 - 888878 - f 95 -17.7 -3.41878 | opp_overlap 888875 888878 888882, overlap 888875 888882 CCGCTGAAGCGACAA CAAAGCCCCGA CCCG TCGGGGCTTTG TTGTTTTCAGCGCCT TERM 762 888878 - 888903 + F 100 -17.7 -4.17316 | opp_overlap 888878 888875 888882, overlap 888875 888882 CCGCTGAAGCGACAA CAAAGCCCCGA CCCG TCGGGGCTTTG TTGTTTTCAGCGCCT TERM 763 888899 - 888882 - f 95 -12.7 -4.35604 | opp_overlap 888882 888878 888875, overlap 888878 888875 TGAAGCGACAACAAA GCCCCGA CCCG TCGGGGC TTTGTTGTTTTCAGC TERM 764 888882 - 888899 + F 100 -12.7 -4.67697 | opp_overlap 888878 888875 888882, overlap 888878 888875 TGAAGCGACAACAAA GCCCCGA CCCG TCGGGGC TTTGTTGTTTTCAGC TERM 765 888966 - 888979 + G 84 -5.2 -4.85599 | TTTGCGCACCCTCCA GCGC CCAGGT GCGC TTTTTGTAAACTGGA TERM 766 889027 - 889056 + G 70 -13.5 -3.05647 | opp_overlap 889018 GACGAAGCCTTTATC GACGTTGCCGCAG GTGA CGGCGGCAACGGC TGTGTCTCGTTCAGG obgE 888934 - 890073 + | GTPase ObgE Ajs_0844 890147 - 891289 + | gamma-glutamyl kinase Ajs_0845 892025 - 891336 - | NUDIX hydrolase TERM 767 891366 - 891402 + g 72 -8.7 -4.11216 | gap 1 CTTCTTGGGGACGGG CAGGGTAGGCAGCGCC TCCAAC GGCGCTGGC-ACGCTG TTTTGCGGGTCAGGG TERM 768 892575 - 892542 - g 78 -16 -3.14463 | gap 1, opp_overlap 892541 892540 AAGTTCCGCGATGAA CGCCGCCCGCGCTTC GGACT GATGCGCGGGC-GCG AATTCATCATGAAGG TERM 769 892859 - 892820 - g 70 -6.3 -4.28254 | gap 2 GGCCAACATGGAAAA GGCCG-AAG-CGCTGGCCC CCGC GGGCGCGCGTCCCGCGGCC AAGCAGCCGCTGACG Ajs_0846 892116 - 893861 + | prolyl-tRNA synthetase Ajs_0847 893882 - 894538 + | lytic transglycosylase, catalytic Ajs_0848 895941 - 894625 - | hypothetical protein TERM 770 895220 - 895210 - G 72 -8.2 -4.11216 | GGGGTAGGTGGAAAA CGGC TCG GCCG CAATGCGCGCGCGGA TERM 771 895285 - 895268 - G 77 -10.5 -4.00042 | overlap 895272 TCGCGCAGGAAATAA GCCACGC GGTC GCGCGGC GACATGCTGCTCGCC TERM 772 896090 - 896074 - R 100 -10.8 -5.76633 | opp_overlap 896074 GCAGACATAAAAAAA CCGCCC GGTGT GGGCGG TTGGTCCATTGGCGG Ajs_0849 896449 - 896120 - | glutaredoxin-like protein Ajs_0850 897346 - 896504 - | HemK family modification methylase Ajs_0851 898507 - 897404 - | peptide chain release factor 1 Ajs_0852 899931 - 898621 - | glutamyl-tRNA reductase Ajs_0853 900006 - 900284 + | hypothetical protein Ajs_0854 901188 - 900286 - | LysR family transcriptional regulator TERM 773 901073 - 901035 - G 74 -14.6 -3.01712 | gap 1, opp_overlap 901039 CCTCGCGCGCGAACA GCGCCA-CGCCCAGGTG CTCCTC CAGCCGGGCGATGGCGC GGCTGATGGCGCCCT TERM 774 901266 - 901279 + G 74 -8.1 -4.1822 | opp_overlap 901266 901267, overlap 901251 GGGGGCGCTCAAGAA TGGGG CTGC CCCCA TTTATTCAAATACCG Ajs_0855 901231 - 902292 + | hypothetical protein TERM 775 902423 - 902367 - g 73 -15.8 -2.52543 | opp_overlap 902368 AGGTCTGGCAACCCA CGGGGCAG-CCGCTGCCGCTGGTGTGCG ACT CGCCCCACAGCGGCA-CGGCCTATCCCG AAGACTTCGGCCACG Ajs_0856 902303 - 903196 + | N-formylglutamate amidohydrolase Ajs_0857 905791 - 903269 - | MscS mechanosensitive ion channel TERM 776 905372 - 905393 + g 85 -13.7 -4.09685 | CTGCTCGGCCACGTC GGGCGCATC CGCG GGTGCGCCC TTTTCGGGCGTGGGG Ajs_0858 906639 - 905890 - | glycerophosphodiester phosphodiesterase TERM 777 906211 - 906257 + g 73 -11.3 -3.6715 | opp_overlap 906190, overlap 906247 906253 CAGCGGTGGCACGCT CTGGCCGTGCCACAGGCGTGC CGCCA GCGCGGCCACGGCGCGGCCGG TTTCGGCTTCGGTAC Ajs_0859 907672 - 906665 - | ABC transporter related Ajs_0860 908584 - 907736 - | binding-protein-dependent transport systems inner membrane component TERM 778 908040 - 908024 - G 70 -3.5 -4.57073 | CACGTCCTTGAAAAA GCGCATG GGC CCGGCGC CGTCGATGCGCGCGG Ajs_0861 909468 - 908587 - | binding-protein-dependent transport systems inner membrane component TERM 779 909514 - 909489 - R 100 -16.9 -4.64846 | TCACAAACGAGAAAA CCGCTGGCGCA AGGC TGCACCAGCGG GAAAAGGAAAAGCGG TERM 780 909547 - 909526 - R 100 -15.1 -4.67038 | GCGGGAAAAGGAAAA GCGGCCCCC AGGC AGGGGCCGC TGACCGAAGGGGCGT Ajs_0862 910912 - 909599 - | extracellular solute-binding protein TERM 781 909656 - 909680 + g 70 -4.1 -4.56597 | overlap 909659 GCCGCGGCTCACGAT GGAGTCCAGGG CTT CCTTGGCCGTC TTTTTGCCGGCCCAC TERM 782 910147 - 910166 + g 71 -12.1 -3.29144 | opp_overlap 910142 AGGTGAACGACGCCT GGGCCGC CGAGCC GCGGCCC TTGTAGACGAACTCG TERM 783 911170 - 911196 + G 72 -5.1 -4.38171 | gap 1, overlap 911172 911173 911193 AATGATCCCCTCTCC TGTCCAG-CGGC GCGC GCCGCCTGGGTG TTTTCATCTCCTCTC TERM 784 911412 - 911466 + G 74 -7.7 -4.18018 | gap 1 CATCCGCTCGCGCAC GCAGCTCACGGCGGACGTGTTCGCGC ATGC GCACAAGCTCGTG-GCCGTGGGGTGC TTTTGCATCGGCACC TERM 785 911635 - 911616 - g 77 -10.6 -3.78934 | CGTGCCCGAGAAGAA CGCTGCGG CCCA CCGCGGCG GCTGGCTCAAGAGCG Ajs_0863 911149 - 912453 + | D-3-phosphoglycerate dehydrogenase TERM 786 915459 - 915443 - g 75 -4.3 -4.65078 | AGATGGGCAAGAAAA GCTTCCG CCC CGGCAAC AAGATGGCCATGGCG TERM 787 916150 - 916116 - g 78 -9.8 -4.08394 | overlap 916117 ATACCTGCTGGAAAA GGGCATCACCCTGCCC GCG GGGCAGGGCGGCTACC TGTACCACGAGCCCT Ajs_0864 912646 - 916569 + | FAD linked oxidase domain-containing protein Ajs_0865 916566 - 917057 + | histidine triad (HIT) protein Ajs_0866 917221 - 917637 + | hypothetical protein TERM 788 917635 - 917677 + F 75 -14.7 -2.76492 | gap 1, overlap 917657 GGCTGCGGCGGGCAT TGAGGCGCAGCACGGCC-CG CCCG CGTGGCCGCGCCGCGCCACG CTTTAGCCTAAATAG TERM 789 917657 - 917678 + F 75 -12.3 -3.61178 | gap 1, overlap 917635 CAGCACGGCCCGCCC GCGTGGCCGC GCC GCG-CCACGC TTTAGCCTAAATAGC Ajs_0867 917762 - 918493 + | ubiquinone/menaquinone biosynthesis methyltransferases TERM 790 918753 - 918699 - g 70 -11.5 -3.36878 | gap 3, overlap 918746 CGCACCCACGCAGAA TGCGGCGGCA---GGCACCACTGCGG CCAAGC CCGCCGCGGCGCCCAATACCGCCGCA GCCGCCCCCAGGAAG Ajs_0868 918532 - 919539 + | import inner membrane translocase, subunit Tim44 TERM 791 919613 - 919636 + F 100 -8.8 -5.33405 | opp_overlap 919612 GTTCGGGGAATAATC GGGGACTATG GCAA CACGGTCCCC TTTTTCTTTCCTGGA Ajs_0869 919620 - 920198 + | hypothetical protein ubiB 920195 - 921760 + | putative ubiquinone biosynthesis protein UbiB Ajs_0871 921799 - 923247 + | Na+/solute symporter Ajs_0872 923278 - 923595 + | FmdB family regulatory protein Ajs_0873 923611 - 924234 + | hypothetical protein TERM 792 925561 - 925549 - g 89 -3.3 -5.32944 | overlap 925550 925559 CCGACAAGGAAAAAA TCGTC AAC GACGC CATCGGCGCACTGCG Ajs_0874 924327 - 926138 + | aspartyl-tRNA synthetase TERM 793 926191 - 926164 - f 73 -12.6 -3.12351 | opp_overlap 926165 GGCTCCGACACCTAA GCGGCAGGCGCG TTCA CGTGCCTGCCGT TTTTGTTTGCCATAA TERM 794 926165 - 926190 + F 100 -18.3 -5.28942 | opp_overlap 926164 GCTCCGACACCTAAG CGGCAGGCGCG TTCA CGTGCCTGCCG TTTTTGTTTGCCATA Ajs_0875 926235 - 927038 + | hypothetical protein Ajs_0876 927049 - 927519 + | NUDIX hydrolase Ajs_0877 927516 - 928283 + | endonuclease/exonuclease/phosphatase Ajs_0878 928288 - 929517 + | phospholipase D/transphosphatidylase TERM 795 929614 - 929602 - f 81 -7.7 -4.45083 | GCTAGAGGCATAAAA GGCTT ATA AAGCC TGGATCGGCATTCGC TERM 796 930220 - 930199 - g 76 -8.7 -4.21194 | gap 1, opp_overlap 930212 930212, overlap 930201 930202 CCTCATCATGGAAAA GACCCAGCCC GAC GGGCTGG-CC ATCGTCATGGAGGCC TERM 797 930219 - 930201 - g 70 -10.2 -3.70674 | opp_overlap 930212 930212, overlap 930199 930202 TCATCATGGAAAAGA CCCAGCCC GAC GGGCTGGC CATCGTCATGGAGGC TERM 798 930218 - 930202 - g 71 -13.7 -2.81922 | opp_overlap 930212 930212, overlap 930201 930199 CATCATGGAAAAGAC CCAGCCC GAC GGGCTGG CCATCGTCATGGAGG Ajs_0879 929645 - 930370 + | GTP cyclohydrolase Ajs_0880 930374 - 930796 + | BLUF domain-containing protein Ajs_0881 931017 - 931928 + | hypothetical protein Ajs_0882 931990 - 932808 + | hypothetical protein Ajs_0883 933484 - 932798 - | hypothetical protein TERM 799 933547 - 933600 + r 71 -10.8 -3.53012 | gap 1 GGGCGCGAGTTGCCG CGCCCGCCGCGCTTCAGCGCACTGG GCCGG TCAGGGCGAGGTAG-GCGGCGCGCG TTTCCGGCGAAACCG Ajs_0884 934171 - 933560 - | hypothetical protein TERM 800 934259 - 934273 + H 77 -12.8 -3.58726 | opp_overlap 934253 934252, overlap 934231 GTGCAGAATGGTGCG CCGCCG CTC CGGCGG TTCTCTGTCCCACCC Ajs_0885 934301 - 934957 + | lysine exporter protein LysE/YggA TERM 801 934972 - 935008 + T 83 -9.4 -4.32482 | overlap 934974 935005 ATACTTCACTTTTTA TAGCTGCTAGCGCTTG TCTAT CAAGCGCTGGAGGCCA TTTTGGCTTGTGCCT Ajs_0886 936427 - 935024 - | amidase TERM 802 936503 - 936530 + r 88 -16.3 -3.30124 | AGTGGCCGTGCCGAG GGGGCTGGCGC TACCAC GCGCCAGCTCC TTATGCCCAGTGCAA Ajs_0887 938021 - 936531 - | extracellular solute-binding protein TERM 803 937779 - 937812 + g 70 -11.6 -3.39449 | CGAGACCTCCCAGCT CTCGGCCAGCAGCG GCGAGA CGCTGCCGTCCGGG TTGATCTTGGTGAGC TERM 804 938057 - 938072 + r 73 -3.2 -4.72272 | gap 1, overlap 938059 GGTGGAATGCGTGCG GC-GGGC TGT GCTCTGC TTTTTACTACAGGGC Ajs_0888 938977 - 938120 - | ABC transporter related Ajs_0889 939978 - 938974 - | oligopeptide/dipeptide ABC transporter, ATPase subunit Ajs_0890 940850 - 939975 - | binding-protein-dependent transport systems inner membrane component Ajs_0891 941857 - 940847 - | binding-protein-dependent transport systems inner membrane component TERM 805 941835 - 941819 - G 74 -15.1 -3.06796 | GGCCATGGGAGTGAA GGCCGCG GCG CGCGGCC GGGGCGGTGGTGGAC TERM 806 941896 - 941868 - H 90 -8.2 -4.95758 | gap 2 AGCATAGGACAAAAA CCGCGGGCGCATGG CGG CCAT-C-CCCACGG GGGCACAGGGGTGGG Ajs_0892 941985 - 942242 + | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein Ajs_0893 942941 - 942306 - | peptidyl-tRNA hydrolase TERM 807 943034 - 943001 - R 100 -13.2 -4.431 | gap 1, overlap 943002 943003 CAGGGAGCCACAAAA CGC-CAACGGCCCAC GCGAG GTGGGCCGTTGAGAG GCAAGAGGCCGCCCC TERM 808 943032 - 943002 - R 74 -13.3 -3.25378 | overlap 943001 943003 AGGGAGCCACAAAAC GCCAACGGCCCAC GCGAG GTGGGCCGTTGAG AGGCAAGAGGCCGCC TERM 809 943031 - 943003 - R 80 -16.8 -2.54745 | overlap 943002 943001 GGGAGCCACAAAACG CCAACGGCCCAC GCGAG GTGGGCCGTTGA GAGGCAAGAGGCCGC Ajs_0894 943702 - 943076 - | 50S ribosomal protein L25P TERM 810 943779 - 943754 - R 71 -8.3 -3.85698 | gap 1, opp_overlap 943758 GGCCCTGTTGATAAA GACCGCACGCCA CCA TGGCATG-GGCC CGTGCTGTCTCCGAA TERM 811 943821 - 943798 - R 73 -11 -3.61398 | overlap 943799 GCTGTCTCCGAACAA GCAAGCCTCC CGAA GGAGGCTTGG GGCTGTGACACCTCC TERM 812 943820 - 943799 - R 75 -14.5 -2.76696 | overlap 943798 CTGTCTCCGAACAAG CAAGCCTCC CGAA GGAGGCTTG GGGCTGTGACACCTC Ajs_0895 944821 - 943856 - | Fis family transcriptional regulator TERM 813 945018 - 944998 - R 72 -4 -4.65895 | gap 1, overlap 945003 TTTTTCATCCAAAAA CCCAATCCG CTAG CGGAT-GAG ACTTTAGATTTTCAC Ajs_0896 945838 - 944987 - | 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase Ajs_0897 946363 - 945848 - | putative lipoprotein Ajs_0898 948159 - 946360 - | TPR repeat-containing protein TERM 814 946764 - 946774 + g 72 -8.2 -4.07885 | GTTCCATGTCGTCGA GGCG GCC CGCC TTTTCCGCCAGCATG TERM 815 948906 - 948946 + G 70 -13.2 -3.06696 | GCCAATGTCTATGGC CGCGCGGGCCTGCCGTGT CGCCA GTGCGGTACGCCCGTGCG TCTGTTGCGCCAGGG Ajs_0899 948189 - 949004 + | formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase TERM 816 949255 - 949273 + G 73 -6 -4.37658 | AAGAGCAGGTGCGCA GCGACA AGGTGAC TGTCGC TTTTGTGGCGGAGTT Ajs_0900 949098 - 951080 + | hypothetical protein Ajs_0901 951077 - 952150 + | A/G-specific DNA-adenine glycosylase Ajs_0902 953124 - 952261 - | hypothetical protein TERM 817 952911 - 952867 - G 73 -14.3 -3.14132 | GGTGGCGTCCAGGAA CAGTTGGCGCACCTGCACG CCCTGCT CGCGCAGGCCGGCCAACTG CTGCGGCACCAGGGG Ajs_0903 954792 - 953128 - | DNA repair protein RecN ppnK 955691 - 954795 - | inorganic polyphosphate/ATP-NAD kinase TERM 818 954904 - 954870 - G 77 -10.8 -3.85698 | gap 1, overlap 954871 GCGCGGGTGCAGAAA GCACACCCGGTGCGC GGAACG GCGCACCAG-TATGC GGTCACCATGTTGCA hrcA 955720 - 956724 + | heat-inducible transcription repressor Ajs_0906 957985 - 958308 + | transposase IS3/IS911 family protein Ajs_0907 958305 - 959219 + | integrase catalytic subunit TERM 819 959810 - 959768 - gT 100 -17.8 -3.96327 | opp_overlap 959768 959779, overlap 959778 ATCTCCGATGACAAA GGGCGCAAAATTCCAAAGCG TGA CGCCTTGGATTTCTGCGCAC TTGTGGCGCCCAAGC TERM 820 959768 - 959810 + GT 77 -13.4 -3.28712 | opp_overlap 959768 959778, overlap 959779 ATCTCCGATGACAAA GGGCGCAAAATTCCAAAGCG TGA CGCCTTGGATTTCTGCGCAC TTGTGGCGCCCAAGC TERM 821 959800 - 959778 - gT 76 -8.4 -4.13343 | opp_overlap 959768 959779, overlap 959768 ACAAAGGGCGCAAAA TTCCAAAGCG TGA CGCCTTGGAT TTCTGCGCACTTGTG TERM 822 959779 - 959799 + GT 74 -9.7 -3.88137 | opp_overlap 959778 959768, overlap 959768 CAAAGGGCGCAAAAT TCCAAAGCG TGA CGCCTTGGA TTTCTGCGCACTTGT Ajs_0909 961239 - 960160 - | integrase catalytic subunit Ajs_0908 959306 - 960250 + | hypothetical protein Ajs_0910 961319 - 961702 + | hypothetical protein Ajs_0911 962617 - 961715 - | hypothetical protein Ajs_0912 963237 - 962614 - | hypothetical protein TERM 823 964652 - 964690 + G 74 -12.4 -3.53224 | TTCATCGCCTGCGTC GATGGGCTCAAGGGCTTC CCT GACGCCATTGAGGCCGTC TTTCCCAAGGCGGTG Ajs_0914 963938 - 965164 + | transposase, mutator type TERM 824 965245 - 965188 - f 83 -5.4 -4.96848 | overlap 965166 965189 965190 CCGTTTACACAAAAA TTCGGACACGCCCGC-CTCAAGCGCGCC TCAA GGC-CGCCTGCGGGTGGACGTGCCCAGC CCTCTGGCACGCATG TERM 825 966154 - 966139 - g 70 -2.4 -4.62302 | CAAGATCGCGAAAAA GGGCGC TCAA GAACCC AGCGTTACTTACCCC Ajs_0916 966008 - 966529 + | hypothetical protein TERM 826 966732 - 966698 - f 71 -12.9 -3.03441 | opp_overlap 966699, overlap 966703 TACCAGTCCCCAATA GCACACCCCGCTATC GCGTT GATAGCGGGGTTTGT TTTTTCACTGCCGAT TERM 827 966699 - 966731 + F 100 -17.1 -5.08824 | opp_overlap 966698 966703 ACCAGTCCCCAATAG CACACCCCGCTATCG CGT TGATAGCGGGGTTTG TTTTTTCACTGCCGA TERM 828 966727 - 966703 - f 79 -15.8 -2.9155 | opp_overlap 966699, overlap 966698 GTCCCCAATAGCACA CCCCGCTATC GCGTT GATAGCGGGG TTTGTTTTTTCACTG TERM 829 967461 - 967494 + G 70 -10.9 -3.53811 | gap 1 GAGACCGCCATTGGC GCGTCGCG-CGCGGAG CAG CAACGCGACGCGATGC TTTGAGGAGGCTGCG Ajs_0917 966891 - 967499 + | hypothetical protein Ajs_0918 967509 - 968093 + | isochorismatase hydrolase Ajs_0919 968112 - 968579 + | hypothetical protein TERM 830 968591 - 968564 - f 76 -9 -4.09685 | overlap 968567 CTTGAGCGTGCAAAA GCACCGCGAGGG CTAG CCCCCTCGCTGC CGTGCCGGGTTACCG TERM 831 968632 - 968648 + F 74 -5.1 -4.56597 | overlap 968625 CCCGTGCACCGCGGC TGCGGTA TGG TGCTGCA TTTTTCGGAGCAGGA Ajs_0920 968674 - 969006 + | hypothetical protein TERM 832 969023 - 969073 + T 83 -14.7 -3.53224 | gap 1, opp_overlap 969035, overlap 969025 969027 CAGCCGCAAGAGTGT G-GCGCCGACGAAGCATGCGTGGC TGTG GCCGGGCGCGCTTCGTCGGTGTGC TTTCGGCGCCCGCTC TERM 833 969025 - 969070 + T 93 -19.7 -2.90496 | opp_overlap 969035, overlap 969023 969027 GCCGCAAGAGTGTGG CGCCGACGAAGCATGCGTGGC TGTG GCCGGGCGCGCTTCGTCGGTG TGCTTTCGGCGCCCG TERM 834 969027 - 969068 + T 91 -18.7 -3.00525 | opp_overlap 969035, overlap 969025 969023 CGCAAGAGTGTGGCG CCGACGAAGCATGCGTGGC TGTG GCCGGGCGCGCTTCGTCGG TGTGCTTTCGGCGCC Ajs_0921 970331 - 969087 - | putative oxygen-independent coproporphyrinogen III oxidase TERM 835 969148 - 969132 - G 72 -5.7 -4.42765 | overlap 969128 GCTCAAAAAATCAAA GCCCCGC TGT GTGGGAC GCACGCGCTCCATGT Ajs_0922 971041 - 970424 - | RdgB/HAM1 family non-canonical purine NTP pyrophosphatase TERM 836 970861 - 970817 - G 100 -21.3 -3.57144 | GGGCTGACCGCCAAA GGCCTGCACGCACAGGCCGGC GTC GTCCGCCAGTGCGGGCAGGCC GGTGTGGGCGCTGGC Ajs_0923 971821 - 971087 - | ribonuclease PH TERM 837 971642 - 971666 + g 74 -7.8 -4.25104 | gap 1, overlap 971638 CACCCAGCCTTCGCC GCTGCCG-CGC TTGT GCGGCGGCACC TTTTCCTCGACCGAC Ajs_0924 972800 - 971898 - | protein phosphatase 2C domain-containing protein Ajs_0925 973813 - 972797 - | serine/threonine protein kinase TERM 838 974357 - 974301 - g 73 -10.9 -3.65902 | TGGACTGGAGCGAAA CG-GCAGCGCGCGCGGCCGAGCAGG-CGC TGG ACGACCTGGT-GGCCGCGCGC-CAACGCG AGGGCGAACGCCTGG Ajs_0926 973895 - 974803 + | hypothetical protein TERM 839 974855 - 974871 + F 100 -10.8 -5.40004 | opp_overlap 974855 CCATCACCCTGTAAA GCCCCG AAATA CGGGGC TTTTTTCATTTCATG TERM 840 974871 - 974855 - f 73 -10.8 -3.56092 | opp_overlap 974855 CCATCACCCTGTAAA GCCCCG AAATA CGGGGC TTTTTTCATTTCATG Ajs_0927 974991 - 976268 + | phage integrase family protein TERM 841 976279 - 976256 - f 74 -12.4 -3.53012 | GCTTCCCTTGCGAAA GGCTGCGGCA TGAT TCCCGCAGCC CTGATCGCCCACTAC Ajs_0928 976265 - 976981 + | hypothetical protein TERM 842 977094 - 977080 - g 100 -10 -5.48213 | GATGGAAAAGAAAAA CGCATC CCT GATGCG CTGAGGAATTTTGAC Ajs_0929 977050 - 977286 + | phage transcriptional regulator, AlpA TERM 843 978049 - 978030 - g 100 -12.2 -4.92756 | overlap 978046 ACCATTAAAAAGAAA CCCATTCC TGAC GGAATGGG AGGGCATCAGGCCGA Ajs_0930 977517 - 978407 + | hypothetical protein Ajs_0931 978404 - 979816 + | replicative DNA helicase Ajs_0932 979806 - 980600 + | XRE family transcriptional regulator TERM 844 980934 - 980917 - gT 75 -4.7 -4.58283 | overlap 980918 CAACCCGCTCAAAAA CCCCCGG AACC CCGGCGA CGAAGGTGACCTGGG TERM 845 981226 - 981241 + GT 79 -4.7 -4.7373 | opp_overlap 981237 TGCCTTCGATTGCGA TTGCG GAAGGA CGCAA TTTTTCCTGCGCTAC TERM 846 981436 - 981421 - gT 70 -10.4 -3.59979 | GCGCGTCATGGCAAA GGCGCT TGCC AGCGCC GACAACAAGGTGCGG TERM 847 981585 - 981566 - gT 73 -8.5 -3.96892 | overlap 981553 981554 AAGGCTCAGGAGAAA GCCGCGC TCGCCC GCGCAGC GAAGGTGGCCGCCAC Ajs_0934 982053 - 981691 - | hypothetical protein Ajs_0933 980597 - 981748 + | hypothetical protein Ajs_0935 982077 - 982328 + | hypothetical protein Ajs_0936 982405 - 983070 + | hypothetical protein Ajs_0937 983385 - 984230 + | hypothetical protein TERM 848 984701 - 984685 - g 79 -2.1 -5.06414 | CCTCGCCAAGAAAAA CCTCTGG CTG CTGGAGG TGACAAGCGCACTGA Ajs_0938 984227 - 985144 + | hypothetical protein Ajs_0939 985362 - 985940 + | hypothetical protein TERM 849 986607 - 986591 - T 84 -10.8 -4.17701 | CCCAGAAATGACAAA CCCGGC GCGCG GCCGGG CATGTGGAATTTCTG Ajs_0940 986984 - 986652 - | hypothetical protein Ajs_0941 987243 - 986965 - | hypothetical protein Ajs_0942 987596 - 987240 - | hypothetical protein Ajs_0943 987709 - 987915 + | hypothetical protein Ajs_0944 987930 - 988235 + | hypothetical protein Ajs_0945 988266 - 988619 + | RelE-like cytotoxic translational repressor of toxin-antitoxin stability system Ajs_0946 988616 - 988900 + | helix-turn-helix domain-containing protein TERM 850 989194 - 989178 - g 71 -15.1 -2.62184 | opp_overlap 989178 CCGTGTCGCACACGA CCCGCGC GCC GCGCGGG CAGGAAAAGCACGGC Ajs_0947 989060 - 989680 + | guanylate kinase Ajs_0948 989696 - 989899 + | DNA-directed RNA polymerase subunit omega TERM 851 989952 - 989932 - f 82 -11.1 -4.08767 | opp_overlap 989934, overlap 989934 GTGATCCCGGTAAAA GAGCACCGC GTG GCGGTGCTT TTTTTTGCCTGCGCT TERM 852 989934 - 989950 + F 100 -13.7 -5.81412 | opp_overlap 989932 989934 GATCCCGGTAAAAGA GCACCGC GTG GCGGTGC TTTTTTTTGCCTGCG TERM 853 989950 - 989934 - f 81 -13.7 -3.6422 | opp_overlap 989934, overlap 989932 GATCCCGGTAAAAGA GCACCGC GTG GCGGTGC TTTTTTTTGCCTGCG TERM 854 990956 - 990946 - g 70 -8.2 -3.95787 | CACCAGATGTACAAA CCGG TGC CCGG CAAGTTCAAGGACCA TERM 855 991206 - 991196 - g 70 -8.2 -4.0127 | overlap 991197 ACATCCAGAATGAAA CGCG CGA CGCG GCCGAATTCTGGGAC TERM 856 991661 - 991633 - g 75 -4.5 -4.58395 | overlap 991635 CCCATTTGGGAAAAA CTGCTGCGCTT TACGGGC AATCGCAGCCG CGCGGAACTCATGAC Ajs_0949 990001 - 992265 + | (p)ppGpp synthetase I, SpoT/RelA Ajs_0950 992839 - 992279 - | transcription elongation factor GreB TERM 857 992581 - 992607 + g 90 -3.5 -5.44119 | opp_overlap 992581 GTTTCGTCAGGAAAC GGATGCGCCTG TCGAT CTCGCGCAGCC TTTTTTTGCCGTACA TERM 858 992909 - 992884 - R 100 -15.5 -5.18355 | opp_overlap 992877 GCCAAAAACGAAAAA GCCCTGGAACC TTGC AGTTCCAGGGC TTACCGTTTGGTGCG Ajs_0951 993413 - 993141 - | hypothetical protein Ajs_0952 993663 - 993929 + | SSU ribosomal protein S15P TERM 859 993949 - 993978 + F 100 -12.2 -5.26875 | opp_overlap 993930, overlap 993942 993943 GCCGGCATGCCGAGA CGCCTGGGTTAG CTCTGT CTAGCTCAGGCG TTTTTTACTTCGGAG TERM 860 994015 - 994073 + F 77 -13.4 -3.281 | gap 3, overlap 994003 994016 CCGCAGAGCGAAGCT -G-TGTCATTCCAGGGGCCTTGCCTT-CC GATG GGCAGGGCAGGGCCGCTGGAATGGCATCG TGTTCTGAATTGCGC TERM 861 994016 - 994070 + F 100 -23.1 -2.8176 | gap 1, overlap 994003 994015 CGCAGAGCGAAGCTG TGTCATTCCAGGGGCCTTGCCTT-CC GATG GGCAGGGCAGGGCCGCTGGAATGGCA TCGTGTTCTGAATTG Ajs_0953 994145 - 996328 + | polynucleotide phosphorylase/polyadenylase TERM 862 996335 - 996354 + F 70 -10 -3.55084 | opp_overlap 996330, overlap 996333 CAGCAGTAAGCCGGG GGTGTTCC TTCG GGAACGCC TGTTTGCTATTGAAA TERM 863 996409 - 996373 - f 77 -14.4 -2.94144 | opp_overlap 996370, overlap 996370 996375 TTGCTATTGAAATGA GAGCTGCTAACGCCCG ATGGA CGGGCGCTATCGGCTC AAATGATTCAAAACT TERM 864 996488 - 996526 + G 75 -11.7 -3.72324 | CCTGAGGGGCTGCGT CTCGCCGAGCGCCCGG-TG CCG CAGCCGGGAGA-CGGCGAG TTGTTGATCCGCGTG TERM 865 997006 - 996976 - g 91 -12.5 -4.25104 | GGGTTCGGATGAAAA GTGCGCAGCCTGC CTGGC GCTGGGTGCGCAC CACGCGATCAACTAC Ajs_0954 996428 - 997432 + | alcohol dehydrogenase Ajs_0955 997429 - 998181 + | triosephosphate isomerase Ajs_0956 998220 - 998600 + | protein translocase subunit secG TERM 866 998863 - 998824 - f 74 -9.1 -3.90241 | opp_overlap 998825, overlap 998825 CACCAATCACAAGAA GCCGCCTCCCTGGTCCC CGTTGC GGGACATGCGAGGCGGT TTTTCAGCGGTGAGC TERM 867 998862 - 998825 - f 70 -12.6 -2.93422 | opp_overlap 998825, overlap 998824 ACCAATCACAAGAAG CCGCCTCCCTGGTCCC CGTTGC GGGACATGCGAGGCGG TTTTTCAGCGGTGAG TERM 868 998825 - 998862 + F 100 -12.6 -4.58395 | opp_overlap 998825 998824 ACCAATCACAAGAAG CCGCCTCCCTGGTCCC CGTTGC GGGACATGCGAGGCGG TTTTTCAGCGGTGAG Ajs_0957 998890 - 999249 + | NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 Ajs_0958 999274 - 999753 + | NADH-quinone oxidoreductase, B subunit Ajs_0959 999764 - 1000372 + | NADH (or F420H2) dehydrogenase, subunit C Ajs_0960 1000399 - 1001652 + | NADH dehydrogenase subunit D Ajs_0961 1001649 - 1002140 + | NADH-quinone oxidoreductase, E subunit Ajs_0962 1002137 - 1003498 + | NADH-quinone oxidoreductase, F subunit Ajs_0963 1003514 - 1005661 + | NADH dehydrogenase subunit G Ajs_0964 1005658 - 1006734 + | respiratory-chain NADH dehydrogenase, subunit 1 Ajs_0965 1006747 - 1007259 + | NADH dehydrogenase subunit I Ajs_0966 1007304 - 1007972 + | NADH-ubiquinone/plastoquinone oxidoreductase, chain 6 Ajs_0967 1007969 - 1008277 + | NADH-ubiquinone oxidoreductase, chain 4L Ajs_0968 1008309 - 1010327 + | proton-translocating NADH-quinone oxidoreductase, chain L TERM 869 1011269 - 1011285 + G 79 -3.6 -4.87626 | overlap 1011270 CCGTTGCGCACATGG GCCTGG TCACC CTGGGC TTTTTCGTGTTCAAC Ajs_0969 1010341 - 1011816 + | proton-translocating NADH-quinone oxidoreductase, chain M Ajs_0970 1011841 - 1013334 + | NADH dehydrogenase subunit N Ajs_0971 1013353 - 1013676 + | putative transmembrane protein Ajs_0972 1013683 - 1014150 + | hypothetical protein Ajs_0973 1016004 - 1014202 - | ABC transporter related TERM 870 1015273 - 1015309 + g 77 -16.6 -2.64155 | gap 1, overlap 1015271 CGCACTCTCCGTAGC CGCCGC-GAAGCGGGCG GCCT CGCGCGCTTCTGCGGTG TAGCTTTGCACCACG Ajs_0974 1016403 - 1016035 - | hypothetical protein Ajs_0975 1016452 - 1017057 + | ABC-type transport system involved in cytochrome c biogenesis ATPase component-like protein Ajs_0976 1017101 - 1017730 + | lysine exporter protein LysE/YggA TERM 871 1017753 - 1017736 - T 100 -14.1 -5.43866 | CAACCGCTAAAAAAA GCCGGCC CAGG GGCCGGC TTGCGCGGTGTGCCG Ajs_0977 1019137 - 1017794 - | glutamate dehydrogenase TERM 872 1019322 - 1019345 + r 71 -11 -3.53012 | TCGACGGCGAATGCC CTGTTGCGCG GGAT TGCGCAACGG TTTGACAGGGGCACG Ajs_0978 1021441 - 1019468 - | DNA mismatch repair protein MutL TERM 873 1021464 - 1021512 + r 70 -10.1 -3.61398 | overlap 1021508 TTTTAGGTGGCGATG CGACCGCGGGTGCTGTAAGGGTC AGT GGCGGTGGCGGTAGCCGCGGTCG TTGTTGCGGCCGACC Ajs_0979 1021736 - 1021485 - | 17 kDa surface antigen Ajs_0980 1021950 - 1022612 + | DedA protein (DSG-1 protein) TERM 874 1022690 - 1022664 - f 95 -10.9 -4.54449 | gap 1, opp_overlap 1022664 ATATTCCATATAAAA CGCCACCGCCTC GCGA GAAG-GGTGGCG TTCTGCATGCTGAGG Ajs_0981 1022685 - 1022993 + | hypothetical protein Ajs_0982 1023404 - 1023072 - | cupin 2 domain-containing protein TERM 875 1023414 - 1023469 + r 95 -11 -4.57837 | gap 2 TGCCATGGCGGTCTC CTGGCCGCCGGCACG--GCCGCGCTG CTCAGA CGGTGCGGCTGCGCGCCAGCGGCGGG TTTTTCGCGAAGTAT Ajs_0983 1024887 - 1023439 - | N-acetylmuramoyl-L-alanine amidase TERM 876 1025683 - 1025697 + G 75 -11.4 -3.70902 | GCCGGCTGGCGCGAC CCACCG AGG CGGTGG TTTCCGTCTACGCCC TERM 877 1025778 - 1025756 - g 78 -9.8 -4.07568 | overlap 1025757 CGCGCGGCTGCAAAA GCTCAGCGAC CGT GTCGCCGAGG CGGTGGGGCCCTTTG TERM 878 1025777 - 1025757 - g 70 -13.3 -3.04398 | overlap 1025756 GCGCGGCTGCAAAAG CTCAGCGAC CGT GTCGCCGAG GCGGTGGGGCCCTTT Ajs_0985 1025376 - 1026461 + | putative iron-sulfur cluster binding protein TERM 879 1026487 - 1026465 - T 91 -7 -5.28166 | GAAAATGAATAAAAA TGGCCTGCAA CGC TTGCAGAACA AGCGCGAGTAGCTAT Ajs_0986 1027433 - 1026516 - | auxin efflux carrier Ajs_0987 1027585 - 1028547 + | hypothetical protein TERM 880 1028563 - 1028599 + F 81 -16 -2.75838 | opp_overlap 1028572, overlap 1028572 GCGCGCCCCCAGCCC TCTGAAAAACGCCCGC CTGCC GCGGGCGTTTTTTTGA TGCTATGGTTTTCGC TERM 881 1028572 - 1028590 + F 100 -13.1 -5.56568 | opp_overlap 1028572, overlap 1028563 CAGCCCTCTGAAAAA CGCCCGC CTGCC GCGGGCG TTTTTTTGATGCTAT TERM 882 1028590 - 1028572 - f 100 -13.1 -4.57073 | opp_overlap 1028572 1028563 CAGCCCTCTGAAAAA CGCCCGC CTGCC GCGGGCG TTTTTTTGATGCTAT TERM 883 1029327 - 1029309 - g 76 -8.8 -4.16842 | GTCATCGTCAAGAAA TGCGCGCA GGC TGCGGGCA TTACCGCGCCGCTGT Ajs_0988 1028604 - 1029515 + | tyrosine recombinase XerD Ajs_0989 1029595 - 1030572 + | hypothetical protein TERM 884 1030572 - 1030621 + T 81 -10.6 -4.24342 | gap 2, opp_overlap 1030573, overlap 1030573 CATCCGCCTGAACTG ACGGCTG-CCCC-GTGCGCGCGCC GGCC GGCCCGCGCACAGGGGACATCGGG TTTATTCGTCGGCCG TERM 885 1030573 - 1030620 + T 76 -14.1 -3.14284 | gap 2, opp_overlap 1030573, overlap 1030572 ATCCGCCTGAACTGA CGGCTG-CCCC-GTGCGCGCGCC GGCC GGCCCGCGCACAGGGGACATCGG GTTTATTCGTCGGCC TERM 886 1030620 - 1030573 - T 71 -14.1 -2.52543 | gap 2, opp_overlap 1030573 1030572 ATCCGCCTGAACTGA CGGCTG-CCCC-GTGCGCGCGCC GGCC GGCCCGCGCACAGGGGACATCGG GTTTATTCGTCGGCC Ajs_0990 1031918 - 1030623 - | diguanylate phosphodiesterase TERM 887 1030772 - 1030785 + g 71 -9.5 -3.79113 | opp_overlap 1030770 TGAGCTCCAGGAAGG GGGCG AACA CGCCC TTGTTGTGCAGCAGT Ajs_0991 1033240 - 1031969 - | diguanylate phosphodiesterase TERM 888 1033365 - 1033348 - R 71 -9.1 -3.68073 | overlap 1033349 CATTGTAGGGAAGAA CCCCCGA TGGC TCGGGGA TGGCAGTGCGGCTGG Ajs_0992 1034194 - 1033388 - | hypothetical protein TERM 889 1034439 - 1034414 - g 72 -13.3 -3.14132 | CGGCGCGGGCACCAA CGTGCAGGACG CGAG CGTGCTGCACG CCGACATCGGCCAGC Ajs_0993 1034244 - 1034768 + | transferase hexapeptide protein TERM 890 1034927 - 1034913 - g 71 -9.2 -3.76373 | CGGCCAACACCGAAA CGGGGC CAT ACCCCG CGCCCGTGAGCGAAC TERM 891 1035559 - 1035539 - g 84 -6.7 -4.72272 | TTCTGGGAGGAAAAA CTGCTGCGC TTC GCGCCTCAG CAGGGCGATAGCGGC Ajs_0994 1034780 - 1035787 + | Hsp33 protein Ajs_0995 1036344 - 1035880 - | hypothetical protein Ajs_0996 1036625 - 1036341 - | cell division protein FtsB TERM 892 1036480 - 1036525 + g 71 -13.9 -2.8655 | gap 1 CGCTCATTGGCCTGG CGCGCCTGCGCATTCGCCGCCT GCT GGGCGGCGA-TCTGCCGGCGCA TGTCCTCTACATGGC Ajs_0997 1037938 - 1036652 - | enolase TERM 893 1037328 - 1037364 + g 95 -5.8 -5.40474 | gap 1, opp_overlap 1037319 GCAAAACCGCCTTCG TCACCCACGGC-GGTGC TCAT GCCCTTGTCGTGGATGA TTTTTTTCAGCGCGT Ajs_0999 1039174 - 1038317 - | 2-dehydro-3-deoxyphosphooctonate aldolase Ajs_1000 1040848 - 1039190 - | CTP synthetase TERM 894 1040163 - 1040173 + g 89 -5.4 -5.1356 | overlap 1040156 ACGTTGGTGAAGAGG GAGA TCT TCTC TTTTTCTTCCTCGGG TERM 895 1041850 - 1041828 - g 88 -10.5 -4.34759 | opp_overlap 1041833, overlap 1041830 CACAAGATCAAGAAA GACGGCACG GGCGA CGTGCCGGC GCTGGAGTTTGTGGA TERM 896 1041848 - 1041830 - g 79 -11.7 -3.76167 | opp_overlap 1041833, overlap 1041828 CAAGATCAAGAAAGA CGGCACG GGCGA CGTGCCG GCGCTGGAGTTTGTG Ajs_1001 1040940 - 1042160 + | phosphopantothenate-cysteine ligase / phosphopantothenoylcysteine decarboxylase Ajs_1002 1042258 - 1042704 + | deoxyuridine 5'-triphosphate nucleotidohydrolase Ajs_1003 1042870 - 1043367 + | 17 kDa surface antigen TERM 897 1043427 - 1043407 - T 100 -18.3 -3.58726 | opp_overlap 1043407 GCCGCGCACACACAA CGGGCTCCC GAG GGGAGCCCG TTTTTTTGGGGCTGT TERM 898 1043407 - 1043427 + T 100 -18.3 -5.42862 | opp_overlap 1043407 GCCGCGCACACACAA CGGGCTCCC GAG GGGAGCCCG TTTTTTTGGGGCTGT Ajs_1004 1043986 - 1043462 - | fkbp-type peptidyl-prolyl cis-trans isomerase Ajs_1005 1044040 - 1045161 + | cupin 4 family protein Ajs_1006 1045185 - 1045697 + | hypothetical protein Ajs_1007 1045877 - 1046158 + | hypothetical protein TERM 899 1046171 - 1046194 + T 95 -21 -3.14132 | opp_overlap 1046165 1046164 1046162 TAAGAACACTCTGAT GCCCGGCCCC TTCA GGGGCCGGGC TTGCTGCAAACCCCG TERM 900 1046200 - 1046230 + T 100 -10.5 -5.02074 | gap 1, opp_overlap 1046165 1046164 1046162 1046205, overlap 1046205 GGGGCCGGGCTTGCT GCAAACCCCGTACC GCAA GGT-CGGGGTTTTC TTTTTTGGGCAATGG TERM 901 1046205 - 1046225 + T 100 -9 -5.42198 | gap 1, opp_overlap 1046205, overlap 1046200 CGGGCTTGCTGCAAA CCCCGTACC GCAA GGT-CGGGG TTTTCTTTTTTGGGC Ajs_1008 1047029 - 1046247 - | beta-lactamase domain-containing protein TERM 902 1047045 - 1047060 + r 74 -6 -4.42238 | opp_overlap 1047021, overlap 1047042 1047041 CGTGTAGGCGCAAGC GGCGCG GCGC CGCCCC TTTTACTTCAGATCA Ajs_1009 1048205 - 1047063 - | NlpB/DapX family lipoprotein TERM 903 1048040 - 1048060 + g 72 -4.6 -4.48072 | overlap 1048027 CCGGAGGCACCTCCA GCGTTGCC CCCTT GGTGGCGC TTTTGTAATCGATCT TERM 904 1048261 - 1048243 - R 71 -13.8 -2.64243 | overlap 1048233 TTAGAGCTTAGAGCA GCCCCGCG GCG CGCAGGGC GGCCTCGACCACGGC Ajs_1010 1049131 - 1048235 - | dihydrodipicolinate synthase Ajs_1011 1049750 - 1049166 - | methyltransferase type 12 TERM 905 1049588 - 1049603 + g 72 -4.6 -4.57353 | overlap 1049590 CTGGCGCTTTGTCTA TGCCCG TTAC CGGGTG TTTTCTATCATAGAA Ajs_1012 1049881 - 1049753 - | hypothetical protein Ajs_1013 1051101 - 1049884 - | major facilitator superfamily transporter Ajs_1014 1051218 - 1053200 + | DNA topoisomerase IV subunit B TERM 906 1053757 - 1053736 - g 74 -8 -4.25104 | CTCGGTGGAGCAAAA GCTGGTGG ACCCCG CCACCAAC GTGGCCGCGGGCACG Ajs_1015 1053239 - 1054117 + | lytic transglycosylase, catalytic TERM 907 1056155 - 1056210 + G 70 -11 -3.59979 | gap 1, overlap 1056127 1056127 CCAGCGGCAGCCAGC CGCTGGCGCCCG-CCACCCATGTGTGC TGC GCATCCGTGGGTGGGCGAGTGCTCACG TTTGAGATCGCCGAA TERM 908 1056406 - 1056390 - g 81 -15.1 -3.61398 | overlap 1056391 CCGCTCGCTCAACAA CGCGCGC GCG GCGCGCG GGCGCAAGGGCAAGG Ajs_1016 1054114 - 1056468 + | DNA topoisomerase IV subunit A Ajs_1017 1056661 - 1058436 + | methyl-accepting chemotaxis sensory transducer TERM 909 1058567 - 1058557 - T 71 -8.2 -3.9122 | GAGGCTGGGAAAGAA CGCG GTG CGCG GCTCAGGCCAGCTCG Ajs_1018 1059028 - 1058570 - | endoribonuclease L-PSP TERM 910 1061198 - 1061218 + H 71 -12.5 -3.05384 | CGACCATGCACTGCA GGCCCTGCG GCC CGCAGAGCC TTGCCTGGCAGGCCA TERM 911 1061596 - 1061653 + H 86 -16.2 -3.12999 | overlap 1061591 CGCCCGACGTGGCGG CGCGCTAC-CGGCAGCGCGGCGTCTTGC TCGT GCA-GTCGCCGCCCTGCGGTGCGGCGCG TTGGGTATCCGATGC Ajs_1020 1061805 - 1063268 + | hypothetical protein Ajs_1021 1063717 - 1064685 + | hypothetical protein Ajs_1022 1065096 - 1064719 - | hypothetical protein Ajs_1023 1065522 - 1065250 - | hypothetical protein Ajs_1024 1066546 - 1065632 - | LysR family transcriptional regulator TERM 912 1068382 - 1068413 + G 77 -3.7 -4.72272 | gap 2, overlap 1068383 GCGCCAAGTTCCGCA ACGCG-GGGC-AGGT CTGC ATCTCGCCCACGCGC TTTTTGGTGCACGAG Ajs_1026 1067547 - 1068983 + | 2,5-dioxopentanoate dehydrogenase (NAD+) TERM 913 1069005 - 1069022 + T 100 -14.1 -5.75342 | CCTTCAGCAGCACCA GCCCCGG CCTG CCGGGGC TTTTTTTTACACCGC Ajs_1027 1071193 - 1069040 - | TonB-dependent siderophore receptor Ajs_1028 1073424 - 1071268 - | TonB-dependent siderophore receptor TERM 914 1071966 - 1071992 + g 73 -14.4 -3.14602 | opp_overlap 1071949 1071946, overlap 1071963 1071975 TGGCGGGCAGGGGCT GCCAGCTCAGCG CGG CGCTGGGCTGGG TCTTGCTCAGATCCG Ajs_1029 1074182 - 1073457 - | hypothetical protein TERM 915 1074325 - 1074340 + r 72 -11.8 -3.35996 | opp_overlap 1074313 GAAGGCTCTCGCAAG GGCGCC CCGG GGCGCC TTGTGGATAACGCTG Ajs_1030 1074795 - 1074448 - | hypothetical protein TERM 916 1074542 - 1074505 - G 100 -20.5 -3.14344 | overlap 1074490 CAGCGCGGCCAGCAA GGCCGCCACGCCGGCGG TAGG CAGCCAGCGTGGCCGCC AGGTGGCCAGCGCCG Ajs_1031 1076479 - 1074797 - | PepSY-associated TM helix domain-containing protein TERM 917 1075254 - 1075200 - G 77 -13.5 -3.5944 | gap 1 AGGTAGACCGCCAAA GCCAGCGGCAGGCCGGCCAGCGCC GCCAGGTT GAGGCTGGCC-ACCAGCCGCTCGC CAAAGGGCAGGCGCT Ajs_1032 1076784 - 1076476 - | putative iron uptake protein Ajs_1033 1078040 - 1077108 - | 3-mercaptopyruvate sulfurtransferase Ajs_1034 1078979 - 1078068 - | putative transmembrane protein TERM 918 1079006 - 1079042 + r 100 -25.4 -3.44229 | opp_overlap 1079006 GGGTATGAATAAAAA TAGCTGCCAGCGCTTG TGTAT CAAGCGCTGGCAGCTA TTGTAATGGTAGCGT TERM 919 1079042 - 1079006 - R 100 -25.4 -5.1356 | opp_overlap 1079006 GGGTATGAATAAAAA TAGCTGCCAGCGCTTG TGTAT CAAGCGCTGGCAGCTA TTGTAATGGTAGCGT Ajs_1035 1080216 - 1079077 - | Rieske (2Fe-2S) domain-containing protein TERM 920 1080021 - 1080037 + g 74 -7.9 -4.25104 | overlap 1080022 CCTGGGCATTGCGCA CGAGGGC GCG GCCCTCC TTTTCCTGGGGCAGC TERM 921 1080317 - 1080281 - H 91 -5.2 -5.36441 | gap 2 GGGCTATAGAAAAAA CGAAACCGGCCCAGGGAA ATA CTCCATA-GCCGGTT-CG TAGTGAGGGAATGGG Ajs_1036 1080499 - 1080768 + | exodeoxyribonuclease VII, small subunit Ajs_1037 1080765 - 1081700 + | farnesyl-diphosphate synthase TERM 922 1082313 - 1082297 - g 72 -11.5 -3.62046 | CGAGGCGCTGAATAA CGCCGGC GTG GCCGACG CCAACCTGCTGGTCA TERM 923 1082963 - 1082981 + G 78 -5.9 -4.58395 | GGGCGTGAAGCCCGT GGTGGCG ATCTA CTCCACC TTTTTGCAGCGTGCC Ajs_1038 1081806 - 1083695 + | 1-deoxy-D-xylulose-5-phosphate synthase TERM 924 1083670 - 1083700 + F 86 -14.1 -3.95986 | gap 2 TCGGCGCATTGCCGG GCGCG-CAGG-CGCT GGC AGCGGCCTGACGCGC TTTCCTTCCCTTCAC Ajs_1039 1083969 - 1085051 + | TRAP dicarboxylate transporter- DctP subunit TERM 925 1085105 - 1085122 + T 100 -12.7 -5.4505 | opp_overlap 1085104 1085101 GCCCAATCCAACGAG GCCGCAG TTCC CTGCGGC TTTTTTGTTGCCCGC TERM 926 1085175 - 1085143 - T 85 -15.8 -3.53012 | gap 1, opp_overlap 1085151, overlap 1085151 TGTTGCCCGCGCAAA CTAAAAAAGCCCCGG CGTA CCGGGGCTTTTT-AG TGGGGTTGAGACGCC TERM 927 1085151 - 1085168 + T 100 -14.1 -4.74801 | opp_overlap 1085143 1085151 GCGCAAACTAAAAAA GCCCCGG CGTA CCGGGGC TTTTTAGTGGGGTTG TERM 928 1085168 - 1085151 - T 100 -14.1 -5.37593 | opp_overlap 1085151, overlap 1085143 GCGCAAACTAAAAAA GCCCCGG CGTA CCGGGGC TTTTTAGTGGGGTTG Ajs_1040 1087017 - 1085191 - | TRAP dicarboxylate transporter, DctM subunit TERM 929 1085990 - 1086018 + g 76 -14.5 -3.09015 | GCGAAGCCCATGACC AGCGCCGCCATGG CAC CCATGGCGCCGCC TTCGGTCGGTGTGGC TERM 930 1087052 - 1087081 + r 76 -9.3 -4.06491 | gap 1 GATCAGCGTTGCGCG GCGGGAGC-GGC GGACAGG GCCTGCTCCTGC TTTCTCTCAGCTTCG Ajs_1041 1087665 - 1087039 - | tripartite ATP-independent periplasmic transporter DctQ TERM 931 1087543 - 1087519 - G 79 -11.5 -3.87815 | CTGCACTTCCAGAAA GGCGTTGGA ACTCGTG TCCAACGCC TTGCGCACGATGGCG Ajs_1042 1089860 - 1087989 - | gamma-glutamyltransferase 1 TERM 932 1090944 - 1090954 + H 73 -8.2 -4.09739 | opp_overlap 1090934 1090933, overlap 1090935 ACAACGGGCTGGTGT CGGC CCT GCCG TTTTCCACCGATTCC TERM 933 1091148 - 1091198 + H 84 -11.1 -4.21194 | gap 2 CTCGTGGGTGCCATG GCGCTGGATGCGCTGCGCAACCGGC GCC GCCTG--GCGGAGGGCATGCAGCGC TTTTCGGTGCTGGGC Ajs_1044 1095026 - 1096159 + | response regulator receiver modulated metal dependent phosphohydrolase TERM 934 1096183 - 1096225 + T 74 -5.7 -4.45083 | gap 2, opp_overlap 1096186 1096188, overlap 1096186 CGCAGCTCTCATAAA AAATAGCTGCTAAGGCGCTTG CAG CAAGCGCG--GGCAGCTATTG TTTTATGAGTGTGAG TERM 935 1096222 - 1096186 - T 91 -5.2 -5.24531 | gap 2, opp_overlap 1096183 1096186, overlap 1096188 AGCTCTCATAAAAAA TAGCTGCTAAGGCGCTTG CAG CAAGCGCGG--GCAGCTA TTGTTTTATGAGTGT TERM 936 1096186 - 1096222 + T 76 -7.4 -4.33785 | gap 2, opp_overlap 1096186 1096188, overlap 1096183 AGCTCTCATAAAAAA TAGCTGCTAAGGCGCTTG CAG CAAGCGCG--GGCAGCTA TTGTTTTATGAGTGT TERM 937 1096207 - 1096188 - T 76 -7.2 -4.25873 | gap 1, opp_overlap 1096186 1096183, overlap 1096186 CTCTCATAAAAAATA GCTGCTAAG GCG CTT-GCAGC AAGCGCGGGCAGCTA Ajs_1045 1097286 - 1096243 - | inositol-phosphate phosphatase TERM 938 1097548 - 1097524 - g 75 -15.7 -2.68487 | overlap 1097521 GCAAGGAGGAGACCA TCCAGCGGGCC AGC GGCGCGCTGGA CGTGCTGGCCCATGC TERM 939 1097913 - 1097936 + G 74 -12.4 -3.59979 | opp_overlap 1097904 TATGAATGGCGGCAG GCCCTCGCCA CCCG TGGGGAGGGC TTTGCGGTGCAGGAG Ajs_1046 1097382 - 1098176 + | RNA methyltransferase TERM 940 1098416 - 1098441 + G 81 -7.4 -4.63218 | GGGCATCGAGATCCA CCCGGGCGCC AAGATC GGCGAGCGGG TTTTCTTCGACCACG Ajs_1047 1098210 - 1099001 + | serine O-acetyltransferase Ajs_1048 1099010 - 1099669 + | nitroreductase TERM 941 1099681 - 1099693 + T 80 -6.2 -4.68384 | opp_overlap 1099680 CTGAGCCCGAGGAAG GGCC GCCGG GGCC TTTTGTTGGGTGGGT Ajs_1049 1100886 - 1099786 - | alcohol dehydrogenase Ajs_1050 1102590 - 1100944 - | sulphate transporter Ajs_1051 1103227 - 1102619 - | molybdopterin adenylyltransferase Ajs_1052 1103882 - 1103220 - | hypothetical protein TERM 942 1103775 - 1103789 + g 79 -11.4 -3.75897 | GAGGTCGGTCTTGGT GGCACC GTC GGTGCC TTTGAGTTCGGCCTT Ajs_1053 1103927 - 1105387 + | microcin-processing peptidase 1 Ajs_1054 1105413 - 1106333 + | hypothetical protein TERM 943 1106406 - 1106392 - T 88 -8.5 -4.81734 | AAAGAGTAGCAAAAA CCGCG TTCGG CGCGG CAACTTGCCTCTCAG Ajs_1055 1107446 - 1106418 - | hypothetical protein TERM 944 1107562 - 1107537 - R 100 -16.3 -4.57073 | opp_overlap 1107543, overlap 1107543 TACCCGTTGGAAAAA CAAAAACCGCC CGAG GGCGGTTTTTG TCACGGACGTTCACA TERM 945 1107543 - 1107556 + r 100 -9.5 -4.82901 | opp_overlap 1107537 1107543 TTGGAAAAACAAAAA CCGCC CGAG GGCGG TTTTTGTCACGGACG TERM 946 1107556 - 1107543 - R 100 -9.5 -5.61881 | opp_overlap 1107543, overlap 1107537 TTGGAAAAACAAAAA CCGCC CGAG GGCGG TTTTTGTCACGGACG Ajs_1056 1109229 - 1107589 - | fumarase TERM 947 1107620 - 1107632 + g 95 -9.1 -5.08255 | GGCACGACCTTGTAT TCGCC CGC GGCGA TTTTCTTTTGCCACT fumC 1109347 - 1110738 + | fumarate hydratase Ajs_1058 1111559 - 1110783 - | CRP/FNR family transcriptional regulator TERM 948 1111723 - 1111707 - R 81 -10.1 -4.10855 | overlap 1111698 AAAAGTGCTCCAAAA GCGCTCG TGG CAAGCGC AAAAAGCTATCAAAA Ajs_1059 1112478 - 1111750 - | two component transcriptional regulator Ajs_1060 1114007 - 1112475 - | integral membrane sensor signal transduction histidine kinase TERM 949 1114026 - 1113993 - G 74 -12.3 -3.53012 | TTGGCCGTGGTGAAA CGCCGAGGATGGCAC GGCC GGGCCACCCCCGGGG CCTGGCCGCGGTGGC TERM 950 1114159 - 1114174 + r 74 -2.4 -4.8543 | CTCGCGCATGAGGGA CGGGCG TTAT CTCCTG TTTTTATGCAAATTG proX 1115056 - 1114205 - | glycine betaine transporter periplasmic subunit TERM 951 1115116 - 1115106 - R 72 -2.4 -4.72272 | overlap 1115107 1115108 CGTTGCGATCAAAAA GGGC CAG GCGC AAGGCGCCAAACGAA TERM 952 1115150 - 1115132 - R 83 -14.6 -3.51976 | overlap 1115128 AAGGCGCCAAACGAA GCTGGGGT GCT ACCCCAGC GAGGCTTGGCAACGC Ajs_1062 1116432 - 1115353 - | integrase catalytic subunit Ajs_1063 1116734 - 1116486 - | hypothetical protein Ajs_1064 1117973 - 1116771 - | binding-protein-dependent transport systems inner membrane component Ajs_1065 1119374 - 1117998 - | glycine betaine/L-proline ABC transporter, ATPase subunit TERM 953 1119907 - 1119882 - R 100 -13.3 -5.26875 | opp_overlap 1119882 TTTTCAAGCAAAAAA CCCATGGAGCG CGGG CGTTCCATGGG TTTGCGGGCGATTGG TERM 954 1119882 - 1119907 + r 86 -15.5 -3.54459 | opp_overlap 1119882 TTTTCAAGCAAAAAA CCCATGGAGCG CGGG CGTTCCATGGG TTTGCGGGCGATTGG Ajs_1066 1120555 - 1119944 - | hypothetical protein Ajs_1067 1120761 - 1122758 + | acetyl-coenzyme A synthetase TERM 955 1123163 - 1123182 + F 91 -7.1 -5.37593 | opp_overlap 1123163, overlap 1123178 ACTTTGCAGACCCAA GCCGCTT CTTGCC AGGCGGC TTTTTTCGTTTCGGG Ajs_1068 1123355 - 1123864 + | hypothetical protein TERM 956 1123885 - 1123910 + T 100 -16.1 -4.56597 | opp_overlap 1123857 1123885 CTTACGCCATAAAAA GGCCGCAGAGC GTGA GCGCTGCGGCC TTTTTGCAGGGCGCG TERM 957 1123910 - 1123885 - T 100 -16.1 -4.85599 | opp_overlap 1123885, overlap 1123857 CTTACGCCATAAAAA GGCCGCAGAGC GTGA GCGCTGCGGCC TTTTTGCAGGGCGCG Ajs_1069 1124256 - 1123951 - | cytochrome c, class I Ajs_1070 1124365 - 1124607 + | hypothetical protein TERM 958 1124631 - 1124657 + T 100 -12.3 -5.06816 | gap 1, opp_overlap 1124631 TCCCTGTCCAGACAA CCCGCAGCGGTG CACG CGCC-CTGCGGG TTTTTCTTGGGCGGT TERM 959 1124710 - 1124726 + T 79 -9.5 -4.20883 | TTTGATAGCTGCTGG CGCTTAT TGG ATAAGCG TTTTCGGCATTTTTC TERM 960 1124784 - 1124749 - T 73 -6.9 -4.2558 | overlap 1124750 1124753 CATTTTTCATGAAAA GTCATCCAGCACC-GCA CCCT TGCTGGCGCTGGAGG-C GTTGAAGGCAAACTT Ajs_1071 1126434 - 1124740 - | dihydroxy-acid dehydratase Ajs_1072 1126664 - 1128520 + | dihydroxy-acid dehydratase TERM 961 1128527 - 1128557 + F 71 -12.5 -3.01918 | overlap 1128523 CTGGACTGACGTGGT GCGGTGCACGCCC ATGCC GGGCGTGCGCTCC TGATTTATGAGCTGC Ajs_1073 1128663 - 1129103 + | hypothetical protein Ajs_1074 1129599 - 1129117 - | bacterioferritin TERM 962 1129637 - 1129655 + H 71 -13.1 -3.05463 | overlap 1129638 TGATGGCGTGAGTAT CCGGCGC CTTGC GCGCCGG TTCAATGGCGGCCGT Ajs_1075 1129772 - 1130605 + | prolipoprotein diacylglyceryl transferase TERM 963 1130607 - 1130648 + F 93 -7.9 -5.00339 | gap 1, opp_overlap 1130608 1130611 1130612 1130613, overlap 1130608 1130612 AGGGATTTGCATAAA AGAAGGC-GCCAGCGCTTGT CCA GCAAGCGCCGGCAGCTCTCA TTTTTGATTGTTCCT TERM 964 1130647 - 1130608 - f 95 -12.9 -4.38712 | gap 1, opp_overlap 1130607 1130608 1130612, overlap 1130611 1130612 1130613 GGGATTTGCATAAAA GAAGGC-GCCAGCGCTTG TCCAG CAAGCGCCGGCAGCTCTC ATTTTTGATTGTTCC TERM 965 1130608 - 1130647 + F 73 -11.4 -3.58577 | gap 1, opp_overlap 1130608 1130611 1130612 1130613, overlap 1130607 1130612 GGGATTTGCATAAAA GAAGGC-GCCAGCGCTTGT CCA GCAAGCGCCGGCAGCTCTC ATTTTTGATTGTTCC TERM 966 1130643 - 1130611 - f 100 -13.4 -4.31397 | opp_overlap 1130608 1130607 1130612, overlap 1130608 1130612 1130613 ATTTGCATAAAAGAA GGCGCCAGCGCTTG TCCAG CAAGCGCCGGCAGC TCTCATTTTTGATTG TERM 967 1130643 - 1130612 - f 80 -14.5 -3.18115 | gap 1, opp_overlap 1130612 1130608 1130607, overlap 1130611 1130608 1130613 TTTGCATAAAAGAAG GC-GCCAGCGCTTG TCCAG CAAGCGCCGGCAGC TCTCATTTTTGATTG TERM 968 1130612 - 1130643 + F 73 -13 -3.21824 | gap 1, opp_overlap 1130611 1130608 1130612 1130613, overlap 1130608 1130607 TTTGCATAAAAGAAG GC-GCCAGCGCTTGT CCA GCAAGCGCCGGCAGC TCTCATTTTTGATTG TERM 969 1130641 - 1130613 - f 74 -14.6 -2.50387 | opp_overlap 1130612 1130608 1130607, overlap 1130611 1130612 1130608 TTGCATAAAAGAAGG CGCCAGCGCTTG TCCAG CAAGCGCCGGCA GCTCTCATTTTTGAT Ajs_1076 1130841 - 1131512 + | GntR family transcriptional regulator TERM 970 1131613 - 1131589 - g 84 -13.5 -3.99374 | CGCCAGCAAGAACAA GGACGGCGCAA GCG CCGCGCCGCCC AAGCCTGCGGCCGAA Ajs_1077 1131509 - 1132969 + | malonyl-CoA decarboxylase Ajs_1078 1133116 - 1134150 + | hypothetical protein Ajs_1079 1134218 - 1135045 + | enoyl-CoA hydratase/isomerase Ajs_1080 1135067 - 1136626 + | malonyl-CoA synthase TERM 971 1136668 - 1136653 - T 100 -11.8 -5.09762 | opp_overlap 1136653 1136648 ATTGCAATACAAAAA GGCGGC CTGG GCCGCC TTTTGCTATTTATAT TERM 972 1136653 - 1136668 + T 100 -11.8 -4.5394 | opp_overlap 1136653, overlap 1136648 ATTGCAATACAAAAA GGCGGC CTGG GCCGCC TTTTGCTATTTATAT Ajs_1081 1137175 - 1136732 - | UspA domain-containing protein TERM 973 1138442 - 1138458 + G 71 -9.3 -3.78953 | overlap 1138425 CTGGCGCAGCTGGCG GACCGGG TGG CCCGGCC TTTCCTGGTGGCGGT Ajs_1082 1137248 - 1139689 + | heavy metal translocating P-type ATPase Ajs_1083 1139691 - 1139828 + | cytochrome oxidase maturation protein, cbb3-type Ajs_1084 1139894 - 1141333 + | cytochrome c oxidase, cbb3-type, subunit I Ajs_1085 1141353 - 1141985 + | cytochrome c oxidase, cbb3-type, subunit II TERM 974 1142029 - 1142049 + G 73 -11.1 -3.74251 | CATGCGTATCGTGGC CACGCTGGC GTC GCTGGCGTG TTTCGTGGGCATCTG Ajs_1086 1142000 - 1142137 + | Cbb3-type cytochrome oxidase component TERM 975 1142368 - 1142330 - g 73 -11 -3.66646 | opp_overlap 1142334 1142337, overlap 1142337 AAGACCTGACGGAAA TGAACAACCCCATGCCCC GTT GGTGGATGTGGCTGTTCA TCATCACGCTGGTAT Ajs_1087 1142167 - 1143081 + | cytochrome c oxidase, cbb3-type, subunit III TERM 976 1143093 - 1143123 + F 100 -21.1 -4.4267 | opp_overlap 1143063 1143064 CTGATGCTCCCTGTG CGGCCGGCTCCCC GTCGA GGGGCGCCGGCCG TTTTGCGTTTTGGAA TERM 977 1143135 - 1143149 + F 86 -8.6 -4.66833 | GCCGTTTTGCGTTTT GGAAGT TGC ACTTCC TTTTTGAGATTCCAC Ajs_1088 1143166 - 1144608 + | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein Ajs_1089 1144670 - 1144948 + | hypothetical protein Ajs_1090 1144986 - 1145312 + | hypothetical protein Ajs_1091 1146096 - 1145353 - | CRP/FNR family transcriptional regulator Ajs_1092 1146268 - 1147650 + | coproporphyrinogen III oxidase Ajs_1093 1147654 - 1148373 + | hypothetical protein Ajs_1094 1149356 - 1149012 - | cell division protein ZapA Ajs_1095 1149592 - 1149353 - | hypothetical protein TERM 978 1149905 - 1149886 - H 71 -10.7 -3.53012 | opp_overlap 1149862 TTTCCTTTTGTGAAA CCTGGGC CGTTAT GCCCAGG TGCCGACGGGGAGGT TERM 979 1150496 - 1150475 - g 84 -7.1 -4.72272 | GCTCTTCACCAAAAA GGGCGAGGG TGCG CCGGCGCCC TACGTGGGCGTGGGC TERM 980 1150780 - 1150768 - g 72 -6.9 -4.2717 | ACGACGGCAGCAAAA CGGCC GAC GACCG CAATCACCACCAGTT Ajs_1096 1149951 - 1151831 + | TonB-dependent receptor TERM 981 1152688 - 1152702 + G 75 -9.2 -4.09685 | opp_overlap 1152665 CTGCAGCAGCTGGGC GCGCGC GTG GTGCGC TTTTCGCCGCTGCGC Ajs_1097 1151854 - 1153212 + | hydrogenobyrinic acid a,c-diamide synthase (glutamine-hydrolysing) / cobyrinate a,c-diamide synthase TERM 982 1153285 - 1153265 - g 73 -6 -4.36914 | opp_overlap 1153281, overlap 1153267 CCTGGGTGGACAAAA GAGCGGCA AGTCG CGCCGCGC CGAACTGCTGGCGCG Ajs_1098 1153209 - 1153808 + | adenosylcobinamide kinase TERM 983 1154330 - 1154350 + G 70 -10.3 -3.63515 | overlap 1154303 CAGTCGCTGCCGCAG CGCGCGCGC GGG GCGCGGGTG TTCTTCGAGGTCAGC Ajs_1099 1153805 - 1154695 + | periplasmic binding protein TERM 984 1155249 - 1155289 + G 71 -12.6 -3.29144 | CGTGGGCGTGGTGCT TGGCGCTGC-GCGCGACCTG ATC CAGGTGGCGCAGCC-CGCCA TTCTGGAGCCGATGC Ajs_1100 1154692 - 1155774 + | transport system permease protein Ajs_1101 1155771 - 1156553 + | ABC transporter related Ajs_1102 1156914 - 1157483 + | cob(I)yrinic acid a,c-diamide adenosyltransferase TERM 985 1158468 - 1158491 + T 71 -11 -3.53012 | overlap 1158473 GGCATAGATGTGGTG CGCAACGGTC TTGG GGCCGTTGTG TTTCGGGAGGGGGCA TERM 986 1158728 - 1158712 - T 100 -7.2 -5.72616 | opp_overlap 1158712 1158710 1158718 ATGGACATAAAAAAA GCGCCC TCGCG AGGCGC TGATTTTTCTGGCGG TERM 987 1158718 - 1158731 + T 75 -3.1 -4.84359 | gap 1, opp_overlap 1158712, overlap 1158712 1158710 ATAAAAAAAGCGCCC TC-GCG AGG CGCTGA TTTTTCTGGCGGTGG Ajs_1105 1159230 - 1158904 - | hypothetical protein TERM 988 1159070 - 1159108 + g 70 -10.3 -3.63694 | gap 2, overlap 1159049 TCCTGCAGTGTGTGG GGAACG-GCCT-GCTTGGC CTC GCCGTGCTGGGCACGTTCC TTGTTCACGGTGCGT TERM 989 1159337 - 1159377 + r 100 -13.5 -4.72272 | opp_overlap 1159339 1159372, overlap 1159339 1159341 CGGACTATGAGTGAA AATGGCTGTTAGCGCTT TACGGAT AAGCGCTAACAGCTATA TTTTTAATAGCAAAA TERM 990 1159339 - 1159375 + r 100 -16.1 -3.98256 | opp_overlap 1159339 1159372, overlap 1159337 1159341 GACTATGAGTGAAAA TGGCTGTTAGCGCTT TACGGAT AAGCGCTAACAGCTA TATTTTTAATAGCAA TERM 991 1159375 - 1159339 - R 93 -13.9 -4.21908 | opp_overlap 1159339 1159337 1159341, overlap 1159372 GACTATGAGTGAAAA TGGCTGTTAGCGCTT TACGGAT AAGCGCTAACAGCTA TATTTTTAATAGCAA TERM 992 1159341 - 1159373 + r 91 -16.5 -3.57901 | opp_overlap 1159339 1159372, overlap 1159339 1159337 CTATGAGTGAAAATG GCTGTTAGCGCTT TACGGAT AAGCGCTAACAGC TATATTTTTAATAGC Ajs_1106 1160084 - 1159398 - | hypothetical protein Ajs_1107 1161419 - 1160193 - | transposase, mutator type TERM 993 1160712 - 1160669 - G 70 -13.2 -3.01712 | gap 1 CCGCCTTGGGGAAGA CTGCCTCGATGGCGTC-AGGG AAG CCCTTGAGCCCATCGACGCAG GCGATGAAGATGTCC TERM 994 1161585 - 1161560 - R 78 -6.7 -4.59853 | overlap 1161562 GTAAGCCGGCAAAAA CACGGGCCCGG CTGT CCAGGTCCGTC CTCCTGCCTCAAGGG TERM 995 1161583 - 1161562 - R 74 -9.3 -3.91164 | overlap 1161560 AAGCCGGCAAAAACA CGGGCCCGG CTGT CCAGGTCCG TCCTCCTGCCTCAAG TERM 996 1161598 - 1161623 + r 100 -14.7 -5.26875 | GTCCTCCTGCCTCAA GGGCTGGTGCC GTCA GGTGCCAGCCC TTTTTTCATTGCGCA Ajs_1108 1162377 - 1161652 - | haloacid dehalogenase, type II Ajs_1109 1162521 - 1163756 + | major facilitator superfamily transporter TERM 997 1163782 - 1163816 + T 88 -7 -5.16572 | overlap 1163783 TGCTATCAAAAAAGA AGCTGCTGGCGCTTGT TGG ACGGGCGCTAGGGGCC TTTTTTACCTTAAGT TERM 998 1163783 - 1163815 + T 74 -10.5 -3.68859 | overlap 1163782 GCTATCAAAAAAGAA GCTGCTGGCGCTTGT TGG ACGGGCGCTAGGGGC CTTTTTTACCTTAAG Ajs_1110 1164970 - 1163831 - | hypothetical protein TERM 999 1164257 - 1164227 - G 71 -14.7 -2.52676 | gap 1 CACCGCGCCAATCGA CGCC-CAGGCCGGG TGCG CCCAGCCCGCGGCG TGTGCCAGCAGGGCG Ajs_1111 1165451 - 1164975 - | MarR family transcriptional regulator TERM 1000 1165533 - 1165498 - R 100 -13.3 -5.02074 | gap 1, opp_overlap 1165501 1165516, overlap 1165451 1165501 TGATTTGTCAAAAAA CAAGGGCCGCGCACCA TGGCC TGGCGGGCGGCCCT-G CTGTGCGCTGCGCTT TERM 1001 1165501 - 1165531 + r 71 -13.9 -2.63596 | opp_overlap 1165498 1165501, overlap 1165516 TTTGTCAAAAAACAA GGGCCGCGCACCA TGGCC TGGCGGGCGGCCC TGCTGTGCGCTGCGC TERM 1002 1165531 - 1165501 - R 100 -16.1 -4.61482 | opp_overlap 1165501 1165516, overlap 1165498 TTTGTCAAAAAACAA GGGCCGCGCACCA TGGCC TGGCGGGCGGCCC TGCTGTGCGCTGCGC Ajs_1112 1167856 - 1165547 - | malic enzyme TERM 1003 1166479 - 1166500 + g 71 -3 -4.59773 | gap 2, overlap 1166482 GCGCACGCTCGTCCT CGCCGTCGGC ATAG GCC-ACG-CG TTTTTGCGCGTCGGG TERM 1004 1167104 - 1167064 - G 70 -11.8 -3.40878 | gap 2, opp_overlap 1167064 1167063 1167062 1167086, overlap 1167062 AGCAGCCCAAGAATA CGTCG-GCGC-CGTTGACCG CAT CGGCCAGCGTGCGCGCGTCG GTCTTCTGTGCGTAG TERM 1005 1167906 - 1167889 - R 84 -4 -5.14563 | overlap 1167891 CGGTGCACGAAAAAA CAGGCC AACACG GGCCGG ACAAGCTTACTGCAT TERM 1006 1168015 - 1167972 - R 72 -7.8 -4.1822 | opp_overlap 1167976, overlap 1167933 1167931 1167973 GTGGACGCCAACAAA CCTTCCGCGCCCCGTGCGCC ATAC GGCACGCGGGGCGCGATCCT TCGGGTGGAAGGCGC TERM 1007 1167976 - 1168011 + r 90 -19.6 -2.73364 | opp_overlap 1167933 1167931 1167973 1167972 ACGCCAACAAACCTT CCGCGCCCCGTGCGCC ATAC GGCACGCGGGGCGCGA TCCTTCGGGTGGAAG Ajs_1113 1169533 - 1168046 - | uracil-xanthine permease TERM 1008 1169486 - 1169501 + g 70 -6 -4.25104 | ACCCAGCGTGGCCGC GCGGCC CCAG GGCAGC TTTTCGTCAACCGGA TERM 1009 1169814 - 1169797 - R 100 -14.1 -5.02074 | GCAGGGCGTAAAAAA GCCCGGC ATGG GCCGGGC TGGAGCATTGGTGCG Ajs_1114 1171127 - 1169838 - | peptidase dimerisation domain-containing protein Ajs_1115 1172904 - 1171135 - | putative bifunctional OHCU decarboxylase/allantoate amidohydrolase Ajs_1116 1174182 - 1172956 - | transposase, IS204/IS1001/IS1096/IS1165 family protein TERM 1010 1173063 - 1173079 + g 73 -13.7 -3.13164 | GCGCGCGACGCTTGG CGGCCTG GAA CAGGCCG TTGAGTGCTTCGAGG TERM 1011 1174246 - 1174189 - R 71 -13.7 -2.5655 | gap 3, overlap 1174188 GTCATGCATACCAAT CGCTCCTGCTCGTCATGGCCGATGCG TGAGCATGC CGCATCGGCCATGACG-GCC--AGCG TACGGGCCGGCAGCC TERM 1012 1174400 - 1174365 - R 93 -7.6 -5.15381 | gap 1, opp_overlap 1174357 AAGAGAGGCAAAAAA GAGCTGCTCGCGCTTAT TGG ATAAGCGTT-GCAGCCC GATTTGGCTTAAATG Ajs_1117 1175368 - 1174409 - | polysaccharide deacetylase TERM 1013 1175059 - 1175015 - G 71 -9.2 -3.87815 | gap 1 GCCCAGTTCGACAAA GGCCTGGGCCACCTCGCGG TGGCGCTG CAGCGCGGTGGCC-ACGCC GAACACCGTGAGCGG Ajs_1118 1176042 - 1175365 - | GntR family transcriptional regulator Ajs_1119 1177009 - 1176095 - | LysR family transcriptional regulator Ajs_1120 1177132 - 1178229 + | tartrate dehydrogenase TERM 1014 1178232 - 1178258 + F 76 -8 -4.25104 | gap 1, overlap 1178235 AGCGCTGGCCTGAGC CG-GTGGGCGG CACGCA CCGCCCATGCG TTTTCATCACGACAA TERM 1015 1178522 - 1178498 - g 71 -9.1 -3.78934 | opp_overlap 1178505, overlap 1178495 GGTGGTGGAGAACAA GCCCGGCGCCG GCG CCACGCTGGGC GCTGACTATGTGGCC Ajs_1121 1178289 - 1179266 + | hypothetical protein TERM 1016 1180320 - 1180372 + G 89 -18.1 -3.35996 | opp_overlap 1180311, overlap 1180321 AGACCACTGTCACCG TGCGCCCGCGCGCCCCGGGCGCGCC GAA GGGGCGCGGCGGCCGCGCGGGCGAG TTCTGCATGGGCCTG TERM 1017 1180321 - 1180371 + G 93 -19.4 -2.61383 | opp_overlap 1180311, overlap 1180320 GACCACTGTCACCGT GCGCCCGCGCGCCCCGGGCGCGCC GAA GGGGCGCGGCGGCCGCGCGGGCGA GTTCTGCATGGGCCT Ajs_1122 1179320 - 1180642 + | hydroxypyruvate reductase Ajs_1123 1180965 - 1181315 + | transthyretin Ajs_1124 1181974 - 1181501 - | hypothetical protein TERM 1018 1182480 - 1182504 + G 82 -11.4 -4.07568 | gap 1 TTGCGCCAACGTCTG GCGCCG-CGGC TGCA GCCGGTGGCGC TTTTCGGCGGCGGCC Ajs_1125 1182072 - 1182959 + | hypothetical protein TERM 1019 1183011 - 1182975 - T 100 -11.6 -4.83615 | opp_overlap 1182975 1182976 1182977, overlap 1182977 GATTGCGTATAAAAA TGGCCGCTGGCGCT TATGGAGCG AGCGCCAGCAGCTA TTAATACAGGAGTTG TERM 1020 1182975 - 1183011 + T 70 -12.3 -3.14881 | opp_overlap 1182975 1182977, overlap 1182976 1182977 GATTGCGTATAAAAA TGGCCGCTGGCGCTT ATGGAGC GAGCGCCAGCAGCTA TTAATACAGGAGTTG TERM 1021 1183009 - 1182977 - T 75 -14.2 -2.6933 | opp_overlap 1182976 1182975 1182977, overlap 1182975 TTGCGTATAAAAATG GCCGCTGGCGCT TATGGAGCG AGCGCCAGCAGC TATTAATACAGGAGT TERM 1022 1182977 - 1183009 + T 73 -12.7 -3.13522 | opp_overlap 1182977 1182975, overlap 1182976 1182975 TTGCGTATAAAAATG GCCGCTGGCGCTT ATGGAGC GAGCGCCAGCAGC TATTAATACAGGAGT Ajs_1126 1184490 - 1183033 - | aldehyde dehydrogenase TERM 1023 1184240 - 1184258 + g 88 -14.6 -3.91352 | AGCAGCGCGCCCAGT TCCTCGCG CCG CGCGAGGA TTTCATTGCCGATCT Ajs_1127 1184499 - 1185296 + | GntR family transcriptional regulator Ajs_1128 1185485 - 1186690 + | hypothetical protein TERM 1024 1186818 - 1186868 + G 100 -21.3 -4.96501 | CCGCGCCCGATGACC GGGGCGTGCAGCGCGTGC-ACGC CGCCGGC GCGTGGCGCGCGCTG-GCGCCCC TTTATTTTTCTCAGG TERM 1025 1187029 - 1187071 + G 86 -8.3 -4.7497 | gap 1, overlap 1187031 CACCTTCCCGCACGA GTCGCGATTCGCCGATGGCG GCTA CGCCGTCGGGGTAGCG-GGC TTTTTCCTGGATGAG Ajs_1129 1186724 - 1188007 + | guanine deaminase TERM 1026 1188558 - 1188569 + G 73 -3.6 -4.63932 | ACGCGGGTGAGGGCT GCGC GCAG GTGC TTTTCTTCCAGGGTG dcd 1188098 - 1188664 + | deoxycytidine triphosphate deaminase Ajs_1131 1189146 - 1190009 + | protein of unknown function, zinc metallopeptidase putative TERM 1027 1190068 - 1190081 + F 71 -9.5 -3.68222 | opp_overlap 1190056 AGACGCCCCGGTACA GGCCG TTAA CGGCC TTGTTGGCCTTCGCC Ajs_1132 1190125 - 1191579 + | DEAD/DEAH box helicase domain-containing protein TERM 1028 1191587 - 1191604 + T 95 -9.8 -4.54727 | opp_overlap 1191587 1191585 1191583 CCCACTGAAAACACA GGCCGC CGTTCA GCGGCC TTTTCATTTAAAAGA Ajs_1133 1192287 - 1191673 - | hypothetical protein Ajs_1134 1192900 - 1192352 - | NosL family protein Ajs_1135 1193712 - 1192897 - | ABC-2 type transporter Ajs_1136 1194665 - 1193733 - | ABC transporter related Ajs_1137 1195911 - 1194640 - | periplasmic copper-binding Ajs_1138 1198529 - 1195908 - | FMN-binding domain-containing protein TERM 1029 1198268 - 1198302 + g 70 -11.4 -3.41051 | opp_overlap 1198268, overlap 1198269 TGTCGGTCGACAGCA TGACGTAGCCCAGAAG CTT CTTCTGGGCCGAGTCG TTGTCATACGCCTCG TERM 1030 1198636 - 1198579 - R 76 -10.5 -3.90744 | gap 1, overlap 1198596 GCGTCTGCGAAAGAA GCCAATTTGACTTACAACCCTCCCAGGC CAG GCCCAGGAGGGTTGCGCGTCAT-CAGGC TTCGACGATCATGCG TERM 1031 1198620 - 1198596 - R 84 -15.7 -3.36803 | overlap 1198579 CAATTTGACTTACAA CCCTCCCAGGC CAG GCCCAGGAGGG TTGCGCGTCATCAGG Ajs_1139 1200571 - 1198631 - | nitrous-oxide reductase TERM 1032 1199399 - 1199422 + g 71 -14.6 -2.6518 | overlap 1199398 1199418 CAGGCCGATTTCCAC CTCGGCGACG ATGG CGTCGTCGAG CTTCTCGCTCTTGCC TERM 1033 1200515 - 1200537 + g 70 -11.2 -3.60792 | opp_overlap 1200515 AGCGGTATTGATGAA CCGGCGGCGT CCC ATGCCGACGG TTTCAGGGTTCAGGC Ajs_1140 1200948 - 1200583 - | hypothetical protein TERM 1034 1201244 - 1201232 - g 72 -4.7 -4.56597 | overlap 1201233 1201235 1201236 CGCCTGTGGCAAAAA CGACG CTC CGGCG CCCGCGCCTGCTCCT Ajs_1141 1201125 - 1201604 + | cytochrome c, class I Ajs_1142 1201623 - 1202711 + | ApbE family lipoprotein TERM 1035 1202752 - 1202715 - T 83 -9.1 -4.30576 | gap 1, opp_overlap 1202716, overlap 1202716 CGCGCAGCATGAAAA CGCTTTCTTCGCGG-GCC AGC GGTGCCGCGAAGAAGGCT TTTGGCGATTTGCGG TERM 1036 1202751 - 1202716 - T 73 -12.6 -3.18024 | gap 1, opp_overlap 1202716, overlap 1202715 GCGCAGCATGAAAAC GCTTTCTTCGCGG-GCC AGC GGTGCCGCGAAGAAGGC TTTTGGCGATTTGCG TERM 1037 1202716 - 1202751 + T 100 -17 -4.17089 | gap 1, opp_overlap 1202716 1202715 GCGCAGCATGAAAAC GCTTTCTTCGCGG-GCC AGC GGTGCCGCGAAGAAGGC TTTTGGCGATTTGCG apaH 1203663 - 1202818 - | diadenosine tetraphosphatase TERM 1038 1203048 - 1203062 + g 75 -11.4 -3.70149 | opp_overlap 1203031, overlap 1203042 GCACCAGCCCTGGAG GCGCCT CGG AGGCGC TTTCGGTGCTCTCGA TERM 1039 1203145 - 1203106 - G 91 -14.2 -4.25104 | opp_overlap 1203102 1203106, overlap 1203107 CTCGGGTGAGCAAAA GCGCATGCGCGTGAGCGC ATTC ACGATCACGCGCAGGCGG TCCGTTCCCTGAAGC TERM 1040 1203144 - 1203107 - G 86 -17.7 -3.14848 | opp_overlap 1203106 1203102, overlap 1203106 TCGGGTGAGCAAAAG CGCATGCGCGTGAGCGC ATTC ACGATCACGCGCAGGCG GTCCGTTCCCTGAAG Ajs_1144 1204003 - 1204299 + | histone family protein nucleoid-structuring protein H-NS TERM 1041 1204374 - 1204398 + F 100 -13.5 -4.49337 | opp_overlap 1204374 GTGTGATTTGAAGAA CCCGCTGGGGC GTG GCCTTGGCGGG TTTTGTCGCTTATGA TERM 1042 1206032 - 1206011 - g 73 -3.5 -4.65895 | opp_overlap 1206024, overlap 1206012 GCCCCCAGCGAAAAA CCCGCACCC GAAG GGGCGCCGC GCTTCCTGGTCGAGA TERM 1043 1206884 - 1206870 - g 79 -3.4 -5.0538 | overlap 1206871 CTGCAGGCCAAAAAA CCTCGG AAT CCGTGA TGGGTGCCCGCATCA Ajs_1145 1204697 - 1207615 + | aconitate hydratase Ajs_1146 1207742 - 1208986 + | monooxygenase, FAD-binding Ajs_1147 1210336 - 1209074 - | major facilitator superfamily transporter TERM 1044 1210364 - 1210395 + r 71 -12.8 -3.07994 | TACACCGGACGCGGC GCGCGTGCAGGCGC GTGC GCACCGGCCCGCGC TTACATGGCCTTGAA Ajs_1148 1211283 - 1210396 - | response regulator receiver protein TERM 1045 1211055 - 1211099 + g 71 -9.2 -3.76232 | gap 2 GCATGCGGATGTCCA GCAGCAGTACGTCGGGGCGCAG CGC CAGCGCCTC-ACGCACGGC-GC TTGTATCTTTAAACC Ajs_1149 1211304 - 1212266 + | transposase IS116/IS110/IS902 family protein Ajs_1150 1213472 - 1212369 - | histidine kinase internal region Ajs_1151 1213836 - 1213516 - | hypothetical protein Ajs_1152 1214068 - 1214892 + | undecaprenyl-diphosphatase Ajs_1153 1216688 - 1214898 - | diguanylate cyclase TERM 1046 1215996 - 1215966 - G 76 -8.2 -4.19704 | GAAGTGGATGGAAAA CCCCGCGCTGCC CAGCACC AGCAGCGCGTAG TAGGCGAACACCTTT Ajs_1154 1217612 - 1216797 - | alpha/beta hydrolase fold Ajs_1155 1218448 - 1217621 - | 20S proteasome, A and B subunits TERM 1047 1218576 - 1218609 + r 74 -6.1 -4.43307 | gap 1, opp_overlap 1218575 1218573 1218577, overlap 1218577 TGCTACCATAAACAT AGCTGCTAGCGCTT TACTGGT AAGCGCTAG-AGCC TTATTTTATTCAAAA TERM 1048 1218742 - 1218794 + r 70 -9.9 -3.61398 | gap 2, opp_overlap 1218762, overlap 1218743 ACGGTCGCCACCTCG GGCGCGGGCGGCGGAGCGAACAG GTCCACCTG CAGTTCG-TCC-TCGCCCGCGCG TTCTTCCAGCGCGGC TERM 1049 1218743 - 1218793 + r 72 -13.4 -2.76696 | gap 2, opp_overlap 1218762, overlap 1218742 CGGTCGCCACCTCGG GCGCGGGCGGCGGAGCGAACAG GTCCACCTG CAGTTCG-TCC-TCGCCCGCGC GTTCTTCCAGCGCGG TERM 1050 1218936 - 1218986 + r 78 -14.8 -3.06796 | GATGTCGTGGCCGGA CTCGGTGGCGC-CCACGTGCACGT TCACC GCGTGCGGGTGGCGCGCCGCC-AG TTCGGTCAGCTCGAA TERM 1051 1219935 - 1219958 + r 70 -11.6 -3.14931 | opp_overlap 1219917 CGGCGCGATCACGCC GCCGTCGCGC ACCA GCGCGGCGGG TTCCTCCAGGATGGC TERM 1052 1220062 - 1220075 + r 75 -3.1 -4.87273 | gap 1, opp_overlap 1220038 1220039, overlap 1220039 1220038 GCTTGACTGTTAAGC GC-GAG AAG CTCTGC TTTTTGTAGCGTCTT TERM 1053 1220240 - 1220290 + r 78 -14.7 -3.01712 | gap 2 GCGCGGCCGTGGCCG CCAGGC-GCTGGCG-CGCGTCGC TGCGGTC GCGGCGCGGCTCCAGCAGCCAGG TCTTGAGCAGGCGGC Ajs_1157 1222943 - 1221339 - | alkaline phosphatase Ajs_1158 1224481 - 1222958 - | diguanylate cyclase Ajs_1159 1225549 - 1224575 - | alcohol dehydrogenase TERM 1054 1226290 - 1226332 + G 70 -6.3 -4.25104 | gap 2 AACTGATGTACTGGA TCGGTGGCGCTGGCGCCGC CAAGGAC GCGGCGG-AGGGC-ACCGA TTTTCATGCCACGGC Ajs_1160 1225626 - 1226468 + | 5'-nucleotidase / 3'-nucleotidase / exopolyphosphatase TERM 1055 1226963 - 1226944 - g 80 -9.2 -4.25104 | CGCGTTGCATGAAAA GGCGCGAG ACCA CTTGCGCC CCCTGCGCCTGGCCA Ajs_1161 1226468 - 1227238 + | protein-L-isoaspartate O-methyltransferase TERM 1056 1227370 - 1227351 - g 70 -13.6 -3.01712 | GGCTCCCGTGGAAGA TCGCGGCA CCTT TGCCGCGA GCAGCGGAACGACGG Ajs_1162 1227250 - 1228161 + | peptidase M23B TERM 1057 1229110 - 1229149 + G 77 -5.1 -4.58395 | gap 3 GCGCTGCCCTGGAGT TCCACGCGCC-GCTGCCG GAAGACA TGGC-GCAGGCGC-TGGA TTTTTGGGGGCTGCG Ajs_1163 1228176 - 1229180 + | ribosomal large subunit pseudouridine synthase D Ajs_1164 1229331 - 1230035 + | condensin subunit ScpB Ajs_1165 1230032 - 1231375 + | ribosomal large subunit pseudouridine synthase B Ajs_1166 1231452 - 1231877 + | nucleoside diphosphate kinase Ajs_1167 1231962 - 1233086 + | radical SAM protein Ajs_1168 1233118 - 1233945 + | type IV pilus biogenesis/stability protein PilW Ajs_1169 1233980 - 1234906 + | hypothetical protein ispG 1234907 - 1236184 + | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase Ajs_1171 1236282 - 1237571 + | histidyl-tRNA synthetase TERM 1058 1238028 - 1238013 - g 70 -6.1 -4.2828 | CCTGATCGAGCAAAA GGCCT ACGACG AGGCC TCGGCGCAGCTGTCG Ajs_1172 1237585 - 1238262 + | hypothetical protein Ajs_1173 1238259 - 1239410 + | Pyrrolo-quinoline quinone Ajs_1174 1239430 - 1240773 + | small GTP-binding protein Ajs_1175 1240851 - 1241102 + | RNA chaperone Hfq TERM 1059 1241196 - 1241224 + G 84 -9.6 -4.54727 | opp_overlap 1241196, overlap 1241191 1241190 TCTCCTGACACGAAA TCCACGCCTGTT CTATT GGTAGGCGTGGA TTTTGGTTTGCCCCA Ajs_1176 1241166 - 1242344 + | small GTP-binding protein TERM 1060 1242761 - 1242773 + G 75 -3.3 -4.77036 | AGCGGTGCTGATCTG GCTGG GCA CTGGC TTTTTCATCGTGCAA Ajs_1177 1242396 - 1243751 + | HflK protein Ajs_1178 1243761 - 1244666 + | HflC protein Ajs_1179 1244696 - 1244875 + | hypothetical protein Ajs_1180 1244951 - 1246099 + | tRNA synthetase, class II (G, H, P and S) TERM 1061 1246429 - 1246408 - g 72 -4.3 -4.57073 | GAGGGGCTCGAAAAA GCGGGCG TCGAAGTG CGCTCGC GTCTGCGCGTCAGTG Ajs_1181 1246129 - 1247505 + | adenylosuccinate synthetase Ajs_1182 1247577 - 1248101 + | phosphoribosyltransferase TERM 1062 1248499 - 1248530 + F 82 -6 -4.87665 | gap 1, opp_overlap 1248493 1248505 1248507 1248510, overlap 1248501 1248502 ACTATCAAACGCTCA TGAGAATAGAAGTGA AGT TCACTTCAATTC-CG TTTTTATGAGTGAAG TERM 1063 1250390 - 1250407 + F 77 -4.1 -4.92757 | opp_overlap 1250378, overlap 1250385 AAATCAACACCAAAG CAGCTTT GCGA GAGGCTG TTTTGTTGTTGATCG TERM 1064 1251197 - 1251186 - f 72 -7.2 -4.2354 | GAAAGGCGAAAAGAA CCCC GGGA GGGG AGTGAAATAGATCCT TERM 1065 1253826 - 1253864 + F 100 -21.9 -2.72511 | opp_overlap 1253830 1253831, overlap 1253831 1253855 1253856 CAGGCTCTTACAGCC CAAACCGCCCTCCCACT ACAAC AGTGGGAGGGCGTTTTG CTTTGCAGCGATAAC TERM 1066 1253860 - 1253830 - f 100 -17.6 -3.63627 | opp_overlap 1253826 1253831 1253855 1253856, overlap 1253831 CTCTTACAGCCCAAA CCGCCCTCCCACTA CAA CAGTGGGAGGGCGT TTTGCTTTGCAGCGA TERM 1067 1253831 - 1253859 + F 100 -20.4 -4.54727 | opp_overlap 1253830 1253831, overlap 1253826 1253855 1253856 TCTTACAGCCCAAAC CGCCCTCCCACT ACAAC AGTGGGAGGGCG TTTTGCTTTGCAGCG TERM 1068 1253859 - 1253831 - f 91 -21.1 -2.77962 | opp_overlap 1253831 1253826 1253855 1253856, overlap 1253830 TCTTACAGCCCAAAC CGCCCTCCCACTA CAA CAGTGGGAGGGCG TTTTGCTTTGCAGCG Ajs_1183 1253890 - 1254627 + | ribosomal small subunit pseudouridine synthase A Ajs_1184 1254787 - 1255761 + | hypothetical protein Ajs_1185 1255748 - 1256587 + | polysaccharide deacetylase TERM 1069 1256886 - 1256902 + G 75 -4.4 -4.62069 | CATGCTTTACACGCT GATCCA TCGCC TGGGTC TTTTTCGCCTGGCAC Ajs_1186 1256638 - 1257636 + | hypothetical protein TERM 1070 1258251 - 1258287 + G 74 -10.1 -3.85698 | GATTTTCAAGCGCCA TCAGCTCAGCCTGCTGA GCA TTGGCGTGCTGAGCGGA TTTCTAGGGGCCGCG Ajs_1187 1257652 - 1258554 + | putative transmembrane protein Ajs_1188 1258551 - 1259372 + | molybdopterin binding domain-containing protein Ajs_1189 1259529 - 1260944 + | L-glutamine synthetase TERM 1071 1260995 - 1260980 - f 75 -11.8 -3.61398 | opp_overlap 1260980 GGCTGTTGTCAACAA GGCGGC TCCG GCCGCC TTTTTCTATGGATGG TERM 1072 1260980 - 1260995 + F 100 -11.8 -4.99035 | opp_overlap 1260980 GGCTGTTGTCAACAA GGCGGC TCCG GCCGCC TTTTTCTATGGATGG Ajs_1190 1261151 - 1261654 + | putative signal peptide protein TERM 1073 1261675 - 1261656 - f 82 -11.4 -4.07618 | gap 1 GCCTGAACAAGTAAA CGC-CGCGG TCC CCGCGTGCG GCACAAAGGCGCGAT Ajs_1191 1261671 - 1262759 + | signal transduction histidine kinase, nitrogen specific, NtrB Ajs_1192 1262811 - 1264346 + | nitrogen metabolism transcriptional regulator, NtrC, Fis family TERM 1074 1265393 - 1265373 - g 72 -8.2 -4.08692 | overlap 1265362 1265358 CAAGGCGCTGGAAAA CGCACTGC CACCC GCCGTGCG CACCCTGGTCGAGCG Ajs_1193 1264528 - 1265481 + | hypothetical protein TERM 1075 1265519 - 1265567 + T 100 -14.4 -4.56597 | opp_overlap 1265539, overlap 1265520 TCGCCCGCGTTGGCC ACCTCAGCCCAGCGACACCACG ACCGG CGCGTGGTCGCTGGGCTGCGGA TTTTTGCGCGGAGCG TERM 1076 1265520 - 1265566 + T 93 -17.9 -3.33744 | opp_overlap 1265539, overlap 1265519 CGCCCGCGTTGGCCA CCTCAGCCCAGCGACACCACG ACCGG CGCGTGGTCGCTGGGCTGCGG ATTTTTGCGCGGAGC Ajs_1194 1266298 - 1265522 - | exodeoxyribonuclease III Xth Ajs_1195 1266863 - 1266369 - | dihydrofolate reductase Ajs_1196 1267561 - 1266866 - | hypothetical protein Ajs_1197 1268432 - 1267599 - | thymidylate synthase Ajs_1198 1269909 - 1268485 - | FAD linked oxidase domain-containing protein Ajs_1199 1270367 - 1269951 - | membrane protein-like protein TERM 1077 1271239 - 1271291 + G 77 -12.1 -3.72324 | gap 4, overlap 1271240 1271280 TGGTGGCCGCCTATC TGCCGAGCCTGCTCGCCGGCGTGGCGC GCT GCGCCACG--GGCGAG--GGCTGGGCC TTCTTGCTGGCCGTG TERM 1078 1271240 - 1271290 + G 76 -15.6 -2.83073 | gap 4, overlap 1271239 1271280 GGTGGCCGCCTATCT GCCGAGCCTGCTCGCCGGCGTGGCGC GCT GCGCCACG--GGCGAG--GGCTGGGC CTTCTTGCTGGCCGT Ajs_1200 1270389 - 1271678 + | putative ribonuclease BN Ajs_1201 1273007 - 1271703 - | amine oxidase TERM 1079 1272155 - 1272141 - G 72 -11.4 -3.54424 | GGCGATGGCGCCAAA GCGCAG TGC CTGCGC ACCGGCGGCCCAGGT Ajs_1202 1273843 - 1273004 - | farnesyl-diphosphate farnesyltransferase TERM 1080 1273792 - 1273814 + g 80 -9 -4.26076 | opp_overlap 1273793, overlap 1273793 GGAAAGCGTAGTAGA AGCTGCTGCC GGA GGCGGCGGCC TTTTGCTGGACGTAC TERM 1081 1273929 - 1273890 - H 76 -12.9 -3.53012 | gap 2, overlap 1273892 GGCTCGCGGGGGAAA CA-TGCG-CGGCGCAGGGC CTGA GCGCTGCGCCGCCGCAACG TCACGGGCCAGACGT TERM 1082 1273926 - 1273892 - H 93 -17.9 -3.34398 | gap 1, overlap 1273890 CTCGCGGGGGAAACA TGCG-CGGCGCAGGGC CTGA GCGCTGCGCCGCCGCA ACGTCACGGGCCAGA TERM 1083 1274663 - 1274635 - g 80 -15.9 -3.31144 | opp_overlap 1274623 GGGCGACTTCGAGAA CGCGGTGGCGCGC GAA GCGCGCAAGCGCG GCCTGCACGGCGTGG Ajs_1203 1273991 - 1274881 + | metallophosphoesterase Ajs_1204 1274887 - 1276053 + | monogalactosyldiacylglycerol synthase Ajs_1205 1277029 - 1276139 - | squalene/phytoene synthase TERM 1084 1277174 - 1277186 + G 100 -10.5 -5.60993 | CCGTCTTCATTGCAA CCCCG CCG CGGGG TTTTTTTGTGGCCGC Ajs_1206 1277117 - 1278274 + | RND family efflux transporter MFP subunit TERM 1085 1278362 - 1278340 - f 85 -14.8 -3.56142 | overlap 1278336 GCTATTAATAATGAA GCGCCAGCGG CCT CCGCTGCCGC TCGCTGAGGAGCCGC TERM 1086 1280224 - 1280252 + G 80 -9.6 -4.18494 | gap 1, opp_overlap 1280209 1280208 GCGTGGCCAGCGTGG CCGCGTGGGTG GGTTCGGG CACCC-CGCGG TTTTACCTGCCGCTG TERM 1087 1281044 - 1281014 - g 71 -12.4 -3.28003 | opp_overlap 1281007 1281026 1281029 GGAAGAGAGCAGCAA GGGCTCGGCCTCCA TCG TGGCGGGCGTGCCC GTCATGCTGTTCATC Ajs_1207 1278381 - 1281530 + | acriflavin resistance protein tig 1281785 - 1283095 + | trigger factor Ajs_1209 1283219 - 1283827 + | ATP-dependent Clp protease proteolytic subunit ClpP TERM 1088 1283845 - 1283871 + F 100 -18.1 -5.39681 | overlap 1283834 TTGGGCCGGCGCGCG CGGCGTTTCCC CCTGT GGGAAACGCCG TTTTTATTTCGTTAT TERM 1089 1283960 - 1283940 - g 83 -2.5 -5.24531 | ATGGCCGAGAAAAAA GGCTCCTCC AGC GAAAAAACC CTTTACTGCTCTTTC clpX 1283925 - 1285190 + | ATP-dependent protease ATP-binding subunit TERM 1090 1285301 - 1285284 - f 72 -4.1 -4.56597 | opp_overlap 1285286, overlap 1285285 1285286 TGCCGGGTTGAAAAA TGTGGTC CATG GACCATA TTCCATGGAACTACT TERM 1091 1287409 - 1287440 + G 100 -20.2 -3.05844 | opp_overlap 1287400 1287427 ACGACAGCGATCGTT TCTGCGCTGACCGG AATA CCGGTCCGCGCAGA TGTTGCGATGACGGG Ajs_1211 1285330 - 1287750 + | Lon-A peptidase TERM 1092 1287972 - 1287985 + F 100 -8.1 -5.26875 | opp_overlap 1287972 1287970 1287963 AAGTCATTGAAAAGA GGAGC TTCG GCTCC TTTTTTCATTCCAGC Ajs_1213 1288148 - 1289383 + | phage integrase family protein Ajs_1214 1289444 - 1290976 + | integrase catalytic subunit Ajs_1215 1290966 - 1291787 + | IstB ATP binding domain-containing protein TERM 1093 1291847 - 1291795 - f 91 -16.1 -3.59979 | opp_overlap 1291796 1291797, overlap 1291796 CCTTCTGATCGGAAA CGGTGATGGGCAAGCCGCTACGGGC TAC GCCCTGCGCGGCTTGCCCATCGCAT TTAACAACACGCCAA TERM 1094 1291796 - 1291846 + F 100 -21.8 -3.53012 | opp_overlap 1291796 1291795, overlap 1291797 CTTCTGATCGGAAAC GGTGATGGGCAAGCCGCTACGGGC TAC GCCCTGCGCGGCTTGCCCATCGCA TTTAACAACACGCCA TERM 1095 1291846 - 1291796 - f 90 -19.6 -2.75844 | opp_overlap 1291796 1291797, overlap 1291795 CTTCTGATCGGAAAC GGTGATGGGCAAGCCGCTACGGGC TAC GCCCTGCGCGGCTTGCCCATCGCA TTTAACAACACGCCA TERM 1096 1291797 - 1291845 + F 100 -25.3 -2.71712 | opp_overlap 1291796 1291795, overlap 1291796 TTCTGATCGGAAACG GTGATGGGCAAGCCGCTACGGGC TAC GCCCTGCGCGGCTTGCCCATCGC ATTTAACAACACGCC Ajs_1216 1291835 - 1292470 + | IstB ATP binding domain-containing protein Ajs_1219 1294231 - 1295220 + | transcriptional regulator Ajs_1220 1295880 - 1295245 - | LysR family transcriptional regulator Ajs_1221 1296054 - 1296671 + | hypothetical protein Ajs_1222 1296668 - 1298338 + | integrase catalytic subunit Ajs_1223 1298335 - 1299231 + | TniB family protein Ajs_1224 1299303 - 1300721 + | hypothetical protein TERM 1097 1300832 - 1300844 + F 74 -4.9 -4.64144 | TTAACGTCTATAACT TTAAC GTG GTTAA TTTTTGCGGATTATT TERM 1098 1301376 - 1301354 - f 74 -12.7 -3.32402 | gap 1, opp_overlap 1301360, overlap 1301352 1301350 1301355 CCCACATTAAAGAGA GCC-GCCGGG CTTG CCCGGCAGGC CGTTGGTCGGCGGCA Ajs_1225 1301445 - 1302671 + | transposase IS116/IS110/IS902 family protein TERM 1099 1302869 - 1302926 + F 71 -13.7 -2.5655 | gap 3, overlap 1302869 GGCTGCCGGCCCGTA CGCT--GGC-CGTCATGGCCGATGCG GCATGCTCA CGCATCGGCCATGACGAGCAGGAGCG ATTGGTATGCATGAC TERM 1100 1304052 - 1304036 - g 73 -13.7 -3.13164 | CCTCGAAGCACTCAA CGGCCTG TTC CAGGCCG CCAAGCGTCGCGCGC Ajs_1226 1302933 - 1304159 + | transposase, IS204/IS1001/IS1096/IS1165 family protein TERM 1101 1304844 - 1304882 + T 74 -12.4 -3.53224 | TTCATCGCCTGCGTC GATGGGCTCAAGGGCTTC CCT GACGCCATTGAGGCCGTC TTTCCCAAGGCGGTG Ajs_1229 1306485 - 1305583 - | LysR family transcriptional regulator Ajs_1230 1307586 - 1306498 - | transposase, IS4 family protein Ajs_1231 1307798 - 1307658 - | hypothetical protein Ajs_1232 1311126 - 1308007 - | CzcA family heavy metal efflux protein TERM 1102 1308162 - 1308183 + g 75 -9.5 -4.07568 | gap 1, overlap 1308162 1308165 GTACCAGGCCCGCCA G-GATGACCG CAA CGGTCATCGC TTTTGGGCGCACGCG Ajs_1234 1312349 - 1311369 - | copper resistance B precursor Ajs_1235 1314267 - 1312375 - | CopA family copper resistance protein TERM 1103 1314115 - 1314135 + g 73 -13.9 -3.14564 | opp_overlap 1314110 CTTCAGCACAGGGGC GGCACCGCG CGT CGCGGAGCC TTGCTGGGCAAATGC Ajs_1236 1314511 - 1315170 + | two component heavy metal response transcriptional regulator Ajs_1238 1316680 - 1315520 - | integrase catalytic subunit Ajs_1239 1316791 - 1317159 + | integrase, catalytic region Ajs_1240 1319257 - 1317323 - | iron permease FTR1 TERM 1104 1318523 - 1318493 - G 71 -12.4 -3.28924 | CATCCGTTCGGACAA GGCGGCCTCGGTCA ATG TGGCAGCGGCCGCC AGGTCGGGAAAGACG Ajs_1241 1319819 - 1319385 - | MerR family transcriptional regulator Ajs_1242 1319914 - 1322313 + | heavy metal translocating P-type ATPase Ajs_1243 1322310 - 1323404 + | signal peptidase II Ajs_1245 1325684 - 1323801 - | relaxase TERM 1105 1325688 - 1325717 + H 83 -7.1 -4.87318 | gap 1 CAGAGAAAGCATGCG GGTGTCCTG-TCGG GGG CCGAGCGGGAGGCC TTTTTGCCTTTTGGG TERM 1106 1325952 - 1325935 - g 70 -8.5 -3.95073 | CTTCACATTGACAAA GTAAGGA AATT TCCTTAC CATGCGGGTATCGCA Ajs_1246 1325914 - 1326300 + | AbrB family transcriptional regulator Ajs_1247 1326300 - 1326758 + | hypothetical protein Ajs_1248 1326785 - 1327162 + | hypothetical protein Ajs_1249 1328695 - 1327178 - | hypothetical protein Ajs_1250 1329069 - 1328710 - | hypothetical protein Ajs_1251 1330460 - 1329066 - | hypothetical protein Ajs_1252 1331417 - 1330470 - | hypothetical protein Ajs_1253 1331860 - 1331414 - | hypothetical protein TERM 1107 1331998 - 1331979 - R 100 -15 -5.1356 | CGCCACGAAGAAAAA GCGGAGGC CGAA GCCTCCGC GCTGATCAACGAAGC Ajs_1254 1332518 - 1332024 - | DNA repair protein RadC Ajs_1255 1333462 - 1332698 - | hypothetical protein TERM 1108 1333060 - 1333046 - G 83 -12.8 -4.07885 | GACGGCTTGCCAAAA GGCGGC GCG GCCGCC GGCTTCGCCCGCGCA Ajs_1256 1336378 - 1333487 - | hypothetical protein TERM 1109 1335461 - 1335449 - G 73 -9.1 -3.90744 | CGGCTGCCCAAAGAA CAGCC GCT GGCTG AAATCCCGCCCGCTC Ajs_1257 1336827 - 1336378 - | putative secreted protein Ajs_1258 1338238 - 1336808 - | putative secreted protein Ajs_1259 1339136 - 1338228 - | putative secreted protein Ajs_1260 1339825 - 1339133 - | putative secreted protein Ajs_1261 1340220 - 1339822 - | hypothetical protein Ajs_1262 1340591 - 1340232 - | hypothetical protein Ajs_1263 1340841 - 1340608 - | hypothetical protein Ajs_1264 1341221 - 1340838 - | hypothetical protein TERM 1110 1340990 - 1340955 - G 72 -11.9 -3.59979 | gap 2 TGGCGTCAGGTGAAA CTGGATG-CC-GGCGCG AACG CGCGCCAGGTCAGCCAG CAGCCGCGGGTAGTC TERM 1111 1341205 - 1341175 - G 89 -10.2 -4.46212 | overlap 1341176 GCCGTCACGAGAAAA GTGGGCACGCCGCG ATG CGCGGCGCGCAGCC AGATCGAAGCCACCA Ajs_1265 1341425 - 1341895 + | DNA binding domain-containing protein TERM 1112 1341939 - 1341956 + G 71 -9.1 -3.82218 | CGCGTGCGTTCTATA TCCCGCG CCAC TGCGGGA TTTCCTGATGTGGCT Ajs_1266 1341892 - 1342467 + | hypothetical protein Ajs_1267 1342485 - 1343399 + | ATPase central domain-containing protein TERM 1113 1343411 - 1343397 - g 77 -2.8 -4.88407 | GGAGGGAAGCAAAAA TGACCA CCG TTGTCA GCCGGACGTTTCGCA Ajs_1268 1343396 - 1343866 + | hypothetical protein Ajs_1269 1343863 - 1344363 + | hypothetical protein Ajs_1270 1344363 - 1345265 + | hypothetical protein TERM 1114 1345539 - 1345551 + G 71 -3.3 -4.67608 | TGGTGGTGTTTGATC GGCAA TAT TCGCC TTTTATCTTCACCTA TERM 1115 1345928 - 1345939 + G 70 -2.2 -4.65933 | gap 1, opp_overlap 1345927 1345919 1345928, overlap 1345928 ACCAACGAAAACAAG C-CGG CGA CCGCG TTTCTTTTCAAGCTG Ajs_1271 1345304 - 1346029 + | hypothetical protein TERM 1116 1348235 - 1348211 - g 71 -12.2 -3.25223 | gap 1 CAGGGAGAGCACGAA CT-GCGGGTCG ACAG CGACCCGCCAG CGAAGAACTATGTTC TERM 1117 1348464 - 1348424 - g 70 -3.8 -4.45738 | GAGCTGAACAATAAA TGCACCAAGTTGCGGTCG GCCGT CGAGCGTATCGCGGCGCA ACATGCGGGTGCGCC Ajs_1272 1346039 - 1348663 + | hypothetical protein Ajs_1273 1349453 - 1348704 - | hypothetical protein Ajs_1274 1351642 - 1349450 - | hypothetical protein TERM 1118 1351583 - 1351562 - G 81 -10.8 -4.07124 | CACCAGGGACAGAAA CGCGGCGC CTGCAC ACGCCGCG ACGGTATATAGCTCC Ajs_1275 1352195 - 1351647 - | putative secreted protein Ajs_1276 1352782 - 1352192 - | lytic transglycosylase, catalytic Ajs_1277 1353489 - 1352764 - | putative secreted protein Ajs_1278 1354141 - 1353506 - | hypothetical protein Ajs_1279 1354704 - 1354138 - | putative secreted protein Ajs_1280 1354831 - 1355193 + | ArsR family transcriptional regulator Ajs_1281 1355196 - 1355690 + | protein tyrosine phosphatase Ajs_1282 1355701 - 1356777 + | arsenical-resistance protein Ajs_1283 1356794 - 1357216 + | arsenate reductase Ajs_1284 1357200 - 1357931 + | NADPH-dependent FMN reductase TERM 1119 1357953 - 1357978 + T 78 -14.7 -3.07994 | opp_overlap 1357954 GAGGCGCTGAAAAAA AGCCGACGACC TCTC GGTCGTCGGCA TTGCGTGAAGTTCAG TERM 1120 1357977 - 1357954 - T 100 -18.2 -5.40474 | opp_overlap 1357953 AGGCGCTGAAAAAAA GCCGACGACC TCTC GGTCGTCGGC ATTGCGTGAAGTTCA Ajs_1285 1360269 - 1357990 - | helicase domain-containing protein TERM 1121 1360330 - 1360290 - R 100 -12.6 -5.27335 | gap 1, overlap 1360291 TGCTCCAAAGAAAAA TGGGGCATG-CACCACCCC CAGC GGGGCAATGGCATGCCCCG TGGTGGGAAGAGAAT TERM 1122 1360329 - 1360291 - R 93 -16.1 -3.75678 | gap 1, overlap 1360290 GCTCCAAAGAAAAAT GGGGCATG-CACCACCCC CAGC GGGGCAATGGCATGCCCC GTGGTGGGAAGAGAA Ajs_1286 1360711 - 1360406 - | hypothetical protein Ajs_1287 1361121 - 1360801 - | hypothetical protein Ajs_1288 1362321 - 1361173 - | hypothetical protein Ajs_1289 1362994 - 1362347 - | hypothetical protein TERM 1123 1363059 - 1363025 - R 86 -17.8 -2.76046 | overlap 1363014 1363022 TGAACGGGAACAGCA CCGCCCGCTGGGGCAA GTA CTGCCCCAGGGGGTGG AAGAAAGCCGCTCAG Ajs_1290 1363331 - 1363071 - | hypothetical protein Ajs_1291 1363755 - 1363348 - | hypothetical protein TERM 1124 1363815 - 1363774 - R 73 -10.7 -3.61517 | gap 1, overlap 1363760 1363775 1363778 AGGCCTCCTGAAGAA TCGAGCCGGAGGC-CTCCCC GTG GGGGAGAGCCCCCAGCGGGT GATGGAGTGCCGCGC TERM 1125 1363814 - 1363775 - R 75 -14.2 -2.76696 | gap 1, overlap 1363760 1363774 1363778 GGCCTCCTGAAGAAT CGAGCCGGAGGC-CTCCCC GTG GGGGAGAGCCCCCAGCGGG TGATGGAGTGCCGCG TERM 1126 1363811 - 1363778 - R 87 -18.9 -2.6563 | gap 1, overlap 1363760 1363775 1363774 CTCCTGAAGAATCGA GCCGGAGGC-CTCCCC GTG GGGGAGAGCCCCCAGC GGGTGATGGAGTGCC Ajs_1292 1364179 - 1363856 - | hypothetical protein TERM 1127 1364237 - 1364199 - R 73 -6.8 -4.38712 | gap 3, overlap 1364200 1364201 GGGACCTCCAGAAAA TGGCCAGGG--CCTCCCCC GCAT GGGGAAGGAACCCCGGC-A GGTGGATGAAGAACA Ajs_1293 1364961 - 1364272 - | hypothetical protein TERM 1128 1365013 - 1364990 - R 88 -8 -4.93316 | overlap 1364994 GAAGAATAGGAAAAA GCAAGGCCCC GTGA GGGGCCATGT CGGATCAGAACGAAG TERM 1129 1365009 - 1364994 - R 81 -11.8 -3.87412 | overlap 1364990 AATAGGAAAAAGCAA GGCCCC GTGA GGGGCC ATGTCGGATCAGAAC Ajs_1294 1365947 - 1365018 - | hypothetical protein TERM 1130 1366068 - 1366037 - R 71 -9.4 -3.69354 | gap 1, overlap 1366030 1366040 GTTGATAAGGCGAAA GC-ATCCGCCACCAG AGG CTGGTGGCCGCTCGC GGAAGGATGCGGTGC TERM 1131 1366786 - 1366775 - R 70 -7.2 -4.03234 | overlap 1366776 GCGGCTGGAGACAAA CGCG CACG CGCG GCGATGGCGGCGGTG TERM 1132 1366834 - 1366811 - R 86 -8.8 -4.63218 | gap 1, overlap 1366814 1366815 GCGGTGCGAACAAAA GAAGGCCCCCG ATG CGGGGGC-TGC GAGGCGGTTGCCGCG TERM 1133 1366832 - 1366814 - R 100 -11.6 -4.43307 | overlap 1366811 1366815 GTGCGAACAAAAGAA GGCCCCCG ATG CGGGGGCT GCGAGGCGGTTGCCG TERM 1134 1366831 - 1366815 - R 83 -15.1 -3.25261 | overlap 1366814 1366811 TGCGAACAAAAGAAG GCCCCCG ATG CGGGGGC TGCGAGGCGGTTGCC Ajs_1296 1367110 - 1366850 - | hypothetical protein TERM 1135 1367591 - 1367638 + r 71 -9.1 -3.73775 | CTCGATGCGGCCCAG CTCGCGCAGCGCCACG-GCCAGG CCGT TCTGGCGCGGGTAGCTGC-CGAG TTTCCTGAGCATCAG Ajs_1298 1369884 - 1368196 - | mercuric reductase Ajs_1299 1370182 - 1369895 - | mercuric transport protein periplasmic component Ajs_1300 1370545 - 1370195 - | putative mercuric transport protein TERM 1136 1370488 - 1370531 + g 90 -18.8 -3.17392 | gap 1, overlap 1370491 AGCAGGCCGAGGCGA GGACGGCCGCGACGCCGCCGG TCG CCAGTG-CGCCGCGGCCGTTC TTGGGTTCCGACATA TERM 1137 1370491 - 1370528 + g 91 -16.9 -3.73068 | gap 1, overlap 1370488 AGGCCGAGGCGAGGA CGGCCGCGACGCCGCCGG TCG CCAGTG-CGCCGCGGCCG TTCTTGGGTTCCGAC Ajs_1301 1370617 - 1371024 + | MerR family transcriptional regulator TERM 1138 1371199 - 1371174 - T 79 -9.7 -4.14257 | opp_overlap 1371174, overlap 1371168 TGGAAGAATGAGAAA GGCCTCCATCC GATG GGATGAAGGGC CTGTAGTGCACGCGG Ajs_1302 1372110 - 1371286 - | hypothetical protein TERM 1139 1372168 - 1372133 - R 81 -6.9 -4.72272 | gap 2, opp_overlap 1372142 1372154, overlap 1372140 CTCCTTGAGGAAAAA CAAGGGATTCCCCGCCC GCAA GGGAGAGG--TCCCTTG TGGGTGGCGTGGATG TERM 1140 1372390 - 1372375 - R 100 -10.4 -5.06414 | TGCGGGCAAGAAAAA GCCCCT CGAA AGGGGC TGGAGGAATCAGGCT Ajs_1303 1372677 - 1372399 - | hypothetical protein TERM 1141 1372459 - 1372444 - G 73 -9 -3.92542 | CTGACGCGGAAAGAA CACGTG TTTC CACGTG TCGCCGCTTGTGTTG TERM 1142 1372738 - 1372696 - R 79 -13.4 -3.53091 | gap 1, opp_overlap 1372700 ATCGCTCCTGTGAAA GTGCGCCGGCCCGGCTCTC TGGCGG GAGA-CCGGGCCGGCATGC GGTGAGGACAAGGAA Ajs_1304 1373512 - 1372775 - | hypothetical protein TERM 1143 1373050 - 1373030 - G 83 -3.2 -5.1356 | gap 1, overlap 1373032 CGCGATGAACAAAAA GGCCTC-CG GCGT CGCGAGGTC AGCCAGGTTGGCCAG TERM 1144 1373579 - 1373546 - R 76 -11 -3.7791 | gap 1, overlap 1373537 TAATGATGGAGCAAA TCCCCGCCACCGGGA ATTGA CCCCGGTGG-GTGGA AAGAAAGGAAACAGC TERM 1145 1373608 - 1373591 - R 89 -11.3 -4.27211 | opp_overlap 1373590 1373604 TGGAAAGAAAGGAAA CAGCGTC AGGT GACGCTG ATCGTTGGCGTTTGG Ajs_1305 1374282 - 1373596 - | hypothetical protein TERM 1146 1374422 - 1374382 - R 100 -17 -4.36914 | gap 1, overlap 1374384 TGGGCGGGGAGAAAA CGCGAGGGACATG-GCCTC GAAC GAGGCGCATGTCCCTCATG GGGTCCCGTGAACGC TERM 1147 1374420 - 1374384 - R 86 -18.2 -2.52946 | gap 1, overlap 1374382 GGCGGGGAGAAAACG CGAGGGACATG-GCCTC GAAC GAGGCGCATGTCCCTCA TGGGGTCCCGTGAAC Ajs_1306 1374857 - 1374465 - | hypothetical protein TERM 1148 1375407 - 1375387 - R 100 -14 -5.0065 | CAGGGACAAAGAAAA GCCCCGCA ACGAG TGCGGGGC GGTCATGACGGTGCG Ajs_1308 1376192 - 1375434 - | hypothetical protein Ajs_1309 1377854 - 1376235 - | C-5 cytosine-specific DNA methylase TERM 1149 1377950 - 1377921 - R 90 -13.5 -3.96624 | overlap 1377922 GATTGGCAGGAGAAA GGCGCCGAAGGCC TTGC GGCCTTCGGCTCG GGAGGACGGAACCAC TERM 1150 1377949 - 1377922 - R 88 -17 -2.97653 | overlap 1377921 ATTGGCAGGAGAAAG GCGCCGAAGGCC TTGC GGCCTTCGGCTC GGGAGGACGGAACCA TERM 1151 1378173 - 1378132 - R 86 -16.5 -3.21218 | overlap 1378118 ACCGCTGACCACGAA GGGTCTCCGGGTGGCTCGC ACAG GCAAGCCATCGGGGGACCC TTCGCAGCGTGCGGA Ajs_1311 1380392 - 1378380 - | DNA topoisomerase III TERM 1152 1380662 - 1380630 - R 72 -14 -2.78596 | TAGCTCGCGAGGACA TGGGGGGCGGCAAC GTACT GCGGCCGCCCCCCC GTCGGATCACTTCCT Ajs_1312 1381121 - 1380669 - | single-strand DNA-binding protein Ajs_1313 1381722 - 1381195 - | putative integrase regulator R protein Ajs_1314 1382513 - 1381719 - | hypothetical protein Ajs_1315 1384179 - 1382944 - | hypothetical protein Ajs_1316 1384742 - 1384182 - | hypothetical protein Ajs_1317 1386436 - 1384757 - | hypothetical protein TERM 1153 1385726 - 1385705 - G 79 -2.9 -5.0133 | CACCTCCTGAAAAAA GCTGTCG AAGTCCAG CGGCAGC GAGCGGTCCTTGGCG TERM 1154 1386142 - 1386107 - G 79 -6.8 -4.61231 | gap 1, opp_overlap 1386136 CGATATGCGGAAAAA CTGCTCGTCCT-TGGTC TCC GACCAGAGTTCGCGCAG GATCGCCAGCCGCGT Ajs_1318 1386698 - 1386429 - | hypothetical protein Ajs_1319 1387557 - 1386682 - | cobyrinic acid a,c-diamide synthase Ajs_1320 1387812 - 1387600 - | phage transcriptional regulator, AlpA Ajs_1321 1388677 - 1387931 - | hypothetical protein Ajs_1322 1389128 - 1389628 + | hypothetical protein TERM 1155 1390870 - 1390892 + G 70 -13.4 -2.96899 | opp_overlap 1390853, overlap 1390874 GCTCGCCGAGCTCGG CGAAGCCGCC AGC GGCAGCTTCG TGTCCTTGGTTCGCA Ajs_1323 1389767 - 1392736 + | transposase Tn3 family protein Ajs_1324 1392822 - 1393073 + | CopG/Arc/MetJ family transcriptional regulator Ajs_1326 1393961 - 1393644 - | hypothetical protein Ajs_1327 1394502 - 1393966 - | hypothetical protein Ajs_1328 1394894 - 1394508 - | hypothetical protein Ajs_1329 1398053 - 1394934 - | CzcA family heavy metal efflux protein TERM 1156 1396508 - 1396536 + g 73 -10.9 -3.71848 | overlap 1396460 GTGCCTTCAGCCAGG CCAGGACCTTGGT GTC ACCGTGGTCCAGG TTCTTCATCCGCGGC Ajs_1330 1399173 - 1398055 - | hypothetical protein Ajs_1331 1399730 - 1399170 - | hypothetical protein Ajs_1332 1401114 - 1399789 - | outer membrane efflux protein TERM 1157 1399995 - 1399951 - G 74 -12.1 -3.62046 | gap 2 GGACTTGTCGAAGAA GCCGC-GCGATTCG-CGCGCC AGTTG GGCGCGACGATCGGCAGCGGC CAGCTGCGCCCGCGC Ajs_1333 1401641 - 1401279 - | hypothetical protein TERM 1158 1401612 - 1401570 - G 82 -17.1 -3.01712 | TTCGTGCCCGCAATA CGCCGCCACTGCCGC-CCAGC TGA ACTGGAGCGGCAGCAG-GGCG AGCATGAGGATCGCG Ajs_1334 1402415 - 1401705 - | hypothetical protein Ajs_1335 1404684 - 1402423 - | heavy metal translocating P-type ATPase TERM 1159 1403344 - 1403392 + g 78 -16 -3.15544 | gap 1 GGTGCCGGTCTTGTC GAGCG-CGACCGCCTTGAGCAGG CGCG CCTGTTCGAGGTGGACGCCGCCC TTGATCAGAATGCCC Ajs_1336 1404762 - 1405202 + | MerR family transcriptional regulator TERM 1160 1406636 - 1406648 + G 71 -9.1 -3.79519 | overlap 1406632 GGAGCGAGCCGGCAG CGCAG CGG CTGCG TTTCATGCTGGACTT Ajs_1337 1405501 - 1407198 + | phage integrase family protein Ajs_1338 1407237 - 1407821 + | hypothetical protein TERM 1161 1407909 - 1407899 - f 72 -2.4 -4.73388 | AATCTGCACGAAAAA TGCG AAG CGCC CGAAAGTGCGGGAAA TERM 1162 1408409 - 1408427 + F 73 -6.6 -4.25104 | opp_overlap 1408409 1408411 CCATATCCAGGAAAA GAGGAGGC AGT GCTTCCGC TTTTCATCAAGGCGC TERM 1163 1408762 - 1408775 + F 100 -9.5 -5.26875 | opp_overlap 1408760 1408762 AAGTCGTTGAAAAGA GGGGC TTCG GCCCC TTTTTTCATTCCAGC Ajs_1340 1408940 - 1410403 + | phage integrase family protein Ajs_1341 1411162 - 1410398 - | IstB ATP binding domain-containing protein Ajs_1342 1412754 - 1411159 - | integrase catalytic subunit TERM 1164 1411424 - 1411406 - G 70 -11.7 -3.48276 | GCGGCGTTGACACAA TGCGCCG GATAT CGGCGCA CCAGGCCGACGATGC TERM 1165 1412463 - 1412425 - G 72 -11.6 -3.53444 | GTACTGGCCGGCAAA GCCGTGGACATCGACCAG GTC CTGGTAGATGGCCGTGGC GTTGCGCTTGAGACG Ajs_1344 1414159 - 1413518 - | LysR family transcriptional regulator Ajs_1345 1414333 - 1414950 + | hypothetical protein Ajs_1346 1414947 - 1416617 + | integrase catalytic subunit Ajs_1347 1416614 - 1417510 + | TniB family protein Ajs_1348 1417582 - 1419000 + | hypothetical protein Ajs_1349 1419138 - 1419431 + | XRE family transcriptional regulator Ajs_1350 1420328 - 1419438 - | LysR family transcriptional regulator Ajs_1351 1420688 - 1420365 - | hypothetical protein Ajs_1352 1422093 - 1420726 - | dihydrolipoamide dehydrogenase TERM 1166 1420990 - 1421007 + g 93 -11.3 -4.3255 | GCCACTACCTTCCGC GATGCCG ACCA CGGCATC TTTCTTCATTGCGGC Ajs_1353 1422940 - 1422134 - | hypothetical protein TERM 1167 1422876 - 1422844 - G 89 -11.2 -4.19238 | overlap 1422849 1422865 TGCCCAAGCCGAAAA CCAACGCCGGCACC GCGAA GATGCCGCCGCCGG CGCCGGTCAATCCCA Ajs_1354 1423471 - 1422959 - | hypothetical protein TERM 1168 1423302 - 1423312 + g 76 -8.2 -4.20918 | ACATTCAAGTCGTTC GCGG AGA CCGC TTTCTTGAGATTGGC TERM 1169 1423455 - 1423442 - G 73 -3.7 -4.63089 | CAGGCCAAAAAACAA GCCAG CAAT CAGGC GATGGTTAGTGGACA dsbG 1424340 - 1423567 - | disulfide isomerase/thiol-disulfide oxidase Ajs_1356 1425179 - 1424343 - | redoxin domain-containing protein TERM 1170 1424386 - 1424397 + g 73 -3.6 -4.59773 | opp_overlap 1424383, overlap 1424383 GATTGCGCGAAACGG CGCG ACAC CGTG TTTTTGAGGCTGGCC Ajs_1357 1427017 - 1425179 - | cytochrome c biogenesis protein, transmembrane region TERM 1171 1427056 - 1427019 - H 70 -7.7 -4.03085 | overlap 1427020 CGATAAAAAGCCAAA TCCGAATCCTCCAAGCA AAGC TGCTTGAAGGATGCGCT CGCTCGATTAAGCGA Ajs_1358 1427164 - 1427832 + | two component transcriptional regulator TERM 1172 1428586 - 1428612 + G 74 -12.2 -3.59979 | AGGTAGCCAGGATCA GCGAGGGCGACG AGG TGGCGTCCTCGC TTTCCAGTGCAGAGG Ajs_1359 1427829 - 1429187 + | integral membrane sensor signal transduction histidine kinase Ajs_1360 1430249 - 1429251 - | thioredoxin reductase Ajs_1361 1430770 - 1430252 - | carboxymuconolactone decarboxylase TERM 1173 1430436 - 1430470 + g 82 -4.9 -4.85599 | gap 1, opp_overlap 1430437, overlap 1430437 TCCTTGCCGTCGAAA AGCGAAGCGATAC-CG TCGG CGCGCATCGCATCGCA TTTTTCTGGCGTGCC TERM 1174 1430469 - 1430437 - G 81 -10.6 -4.07568 | gap 1, opp_overlap 1430436 1430437 CCTTGCCGTCGAAAA GCGAAGCGATAC-CG TCGG CGCGCATCGCATCGC ATTTTTCTGGCGTGC Ajs_1362 1431174 - 1430854 - | thioredoxin Ajs_1363 1431365 - 1432048 + | ArsR family transcriptional regulator Ajs_1364 1432710 - 1432066 - | DSBA oxidoreductase Ajs_1365 1433673 - 1432774 - | putative secreted protein TERM 1175 1433143 - 1433180 + g 77 -12.7 -3.71284 | gap 1, opp_overlap 1433124, overlap 1433175 GCCCAGAAGTTTCCC GCGGACGGCCATTGCAGC GTC GCTGCCATG-CTGGCCGC TTGTCTTGATCAGGC Ajs_1366 1434276 - 1433812 - | putative secreted protein Ajs_1367 1435363 - 1434386 - | potassium-tellurite ethidium and proflavin transporter TERM 1176 1434505 - 1434493 - G 72 -6.9 -4.25104 | overlap 1434494 TGGCGCCGACGAAAA CCGGC ACG GCCAG AACCTGTGCCGAATG TERM 1177 1435455 - 1435502 + r 100 -12.1 -4.67982 | gap 3, overlap 1435454 1435458 1435458 GTCAAGCGGTGTCAC TTGCCGCCGCCGCAGCAGGTCTTC GCC GAAG-CC-GATGCGGCGGC-GCGG TTTTGTTCGATCAGG TERM 1178 1435458 - 1435500 + r 74 -14.9 -2.63702 | gap 2, overlap 1435454 1435455 1435458 AAGCGGTGTCACTTG CCGCCGCCGCAGCAGGTCTTC GCC GAAG-CC-GATGCGGCGGCGC GGTTTTGTTCGATCA TERM 1179 1435458 - 1435501 + r 83 -14.7 -3.40307 | gap 3, overlap 1435454 1435458 1435455 AAGCGGTGTCACTTG C-CGCCGCCGCAGCAGGTCTTC GCC GAAG-CC-GATGCGGCGGCGCG GTTTTGTTCGATCAG Ajs_1368 1435708 - 1435451 - | heavy metal transport/detoxification protein Ajs_1369 1436952 - 1435867 - | major facilitator superfamily transporter Ajs_1370 1438275 - 1437274 - | cation diffusion facilitator family transporter TERM 1180 1438340 - 1438319 - R 73 -8.1 -4.0865 | opp_overlap 1438332, overlap 1438327 1438332 TGCAAGAAAATATAA CACATGAAC ATAT GTTCATATG AACTATATGAATCAA TERM 1181 1438410 - 1438432 + r 70 -10.5 -3.59979 | opp_overlap 1438412 CTTGGGGTTGGGCAA CAGCGACCC TCGAC GGGCCGCTG TTTGGCATGACCGAC Ajs_1371 1438817 - 1438464 - | ArsR family transcriptional regulator TERM 1182 1438511 - 1438527 + g 71 -12.3 -3.30159 | overlap 1438515 TGGCCATATCCAGCA GCACGTG GCT CACGTGC TTGTCCGCCACTTCG Ajs_1372 1438985 - 1441486 + | heavy metal translocating P-type ATPase Ajs_1373 1441502 - 1441981 + | MerR family transcriptional regulator Ajs_1374 1443284 - 1442055 - | major facilitator superfamily transporter Ajs_1375 1444365 - 1443337 - | alcohol dehydrogenase Ajs_1376 1445580 - 1444402 - | aminotransferase, class I and II Ajs_1377 1446747 - 1445599 - | amine oxidase Ajs_1379 1447206 - 1448285 + | integrase catalytic subunit Ajs_1380 1448388 - 1449467 + | integrase catalytic subunit TERM 1183 1451006 - 1450973 - T 83 -13.2 -3.96148 | gap 1, opp_overlap 1450973 1450975 CTGTCGCAGCAGAAA CG-CGAATTGGCCCG GATCG CGGGCCAACCCGTCG TTGCCTGCATGGCTT Ajs_1382 1451364 - 1451020 - | alkylhydroperoxidase TERM 1184 1451134 - 1451152 + g 70 -5.9 -4.2349 | GATCTCTTCCTTGGT GGCACCG TACTC CGCTGCC TTTTGCGTGTGCACG TERM 1185 1451419 - 1451391 - R 100 -16 -5.00616 | TTCTTTGTCAAAAAA TGCCGGGTGGGC GGTGG GCACACCCGGCA ACGATGAGCATCACG Ajs_1383 1451759 - 1451430 - | hypothetical protein Ajs_1384 1452557 - 1451784 - | short-chain dehydrogenase/reductase SDR Ajs_1385 1452758 - 1453693 + | LysR family transcriptional regulator Ajs_1386 1453950 - 1454447 + | hypothetical protein Ajs_1387 1456494 - 1454512 - | relaxase TERM 1186 1455065 - 1455120 + g 71 -12.4 -3.27704 | gap 1, overlap 1455086 ACGTCGGGCATGGCC GGGGCCTTGGCTTGGGGAGACGGC-GC GAT GCTGCCGCCTTCCCACGGCGGAGCCTC TTGGCTTTCCACGGT TERM 1187 1456367 - 1456378 + g 72 -7.2 -4.28049 | overlap 1456352 1456368 1456375 TCCTCATGGCGGGCC GGCC AGGA GGCC TTTTGGCCTTTTCGA Ajs_1388 1456658 - 1457284 + | hypothetical protein Ajs_1389 1457297 - 1457914 + | hypothetical protein Ajs_1390 1458014 - 1458376 + | hypothetical protein Ajs_1391 1459906 - 1458383 - | hypothetical protein Ajs_1392 1460292 - 1459921 - | hypothetical protein Ajs_1393 1461686 - 1460289 - | hypothetical protein TERM 1188 1460559 - 1460576 + g 81 -12.7 -3.85698 | CCCCGTGAGCAGCGT GCGCTGC AGCA GCAGCGC TTTCTCCAGCACGGA TERM 1189 1460668 - 1460709 + g 75 -14.3 -3.30441 | gap 1, overlap 1460668 1460700 1460702 1460704 AGTGCTTCGATCACG CC-GCGCGTGATCGGCAGCG ATG CACTGCCGGCCTCGCGCAGG TTCTCCGGCGTCGTG TERM 1190 1460668 - 1460708 + g 71 -14.5 -2.5805 | overlap 1460668 1460700 1460702 1460704 AGTGCTTCGATCACG CCGCGCGTGATCGGCAGCG ATG CACTGCCGGCCTCGCGCAG GTTCTCCGGCGTCGT TERM 1191 1461345 - 1461327 - G 70 -11.7 -3.41073 | overlap 1461325 CAGCGCAGGCAAAGA CGCCACC GCGCT GGTGGCG CTCTGGATCACTGAC Ajs_1394 1462643 - 1461696 - | hypothetical protein Ajs_1395 1463086 - 1462640 - | hypothetical protein TERM 1192 1463224 - 1463205 - R 100 -15 -5.1356 | CGCCACGAAGAAAAA GCGGAGGC CGAA GCCTCCGC GCTGATCAACGAAGC Ajs_1396 1463744 - 1463250 - | DNA repair protein RadC Ajs_1397 1464709 - 1463924 - | hypothetical protein Ajs_1398 1467590 - 1464723 - | hypothetical protein Ajs_1399 1468030 - 1467590 - | putative secreted protein TERM 1193 1467929 - 1467950 + g 79 -7.9 -4.46615 | overlap 1467928 GATGTCCATCATCGT GCTGTCGCC GTGG GGCAGCAGC TTTTCCTTGCTGGTG Ajs_1400 1469441 - 1468011 - | putative secreted protein Ajs_1401 1470339 - 1469431 - | putative secreted protein Ajs_1402 1471028 - 1470336 - | putative secreted protein Ajs_1403 1471423 - 1471025 - | hypothetical protein Ajs_1404 1471794 - 1471435 - | hypothetical protein Ajs_1405 1472044 - 1471811 - | hypothetical protein Ajs_1406 1472421 - 1472041 - | putative secreted protein Ajs_1407 1473269 - 1472520 - | hypothetical protein Ajs_1408 1475458 - 1473266 - | hypothetical protein TERM 1194 1475399 - 1475378 - G 81 -10.8 -4.07124 | CACCAGGGACAGAAA CGCGGCGC CTGCAC ACGCCGCG ACGGTATATAGCTCC Ajs_1409 1476011 - 1475463 - | putative secreted protein Ajs_1410 1476598 - 1476008 - | lytic transglycosylase, catalytic Ajs_1411 1477305 - 1476580 - | putative secreted protein Ajs_1412 1477944 - 1477318 - | putative secreted protein TERM 1195 1477631 - 1477656 + g 71 -9.7 -3.87815 | gap 1, opp_overlap 1477628 AGTGCCTGAAGATCG TCG-GCAGCGGC GTA GCCGCTGAGCGA TTTCTCGACCTGGGC Ajs_1413 1478540 - 1477941 - | putative secreted protein TERM 1196 1478503 - 1478488 - G 73 -6 -4.3898 | overlap 1478474 1478489 AGCAGGCCGAGAAAA CCCGCC AGCA GGCGGC GTTCGGGATGGTGAA Ajs_1414 1479817 - 1478729 - | hypothetical protein TERM 1197 1479086 - 1479106 + g 79 -11.8 -3.86015 | overlap 1479081 CATGGCATTCCAGCG CCGCGCGG TGTGC TCGCGCGG TTTGTGACCGGCATC Ajs_1415 1481960 - 1479834 - | cytochrome c, class I TERM 1198 1482331 - 1482314 - R 100 -12.7 -5.40072 | CGCGTGTCAAAAAAA CAGGCCC CGAA GGGCCTG TGAAAACGCACATCG Ajs_1416 1483043 - 1482357 - | hypothetical protein TERM 1199 1483106 - 1483064 - R 76 -10.4 -3.85698 | overlap 1483050 1483066 1483067 TCTCCTTGGGATAAA GAGCGCAGCCACGTACACGG AGA CCGTGAACGTGGCTGCTAGG TGGGAACAACGGAAA TERM 1200 1483104 - 1483066 - R 93 -17.4 -3.51934 | overlap 1483064 1483067 TCCTTGGGATAAAGA GCGCAGCCACGTACACGG AGA CCGTGAACGTGGCTGCTA GGTGGGAACAACGGA TERM 1201 1483103 - 1483067 - R 91 -20.9 -2.70946 | overlap 1483066 1483064 CCTTGGGATAAAGAG CGCAGCCACGTACACGG AGA CCGTGAACGTGGCTGCT AGGTGGGAACAACGG Ajs_1417 1485434 - 1483155 - | helicase domain-containing protein TERM 1202 1485495 - 1485455 - R 100 -10.4 -5.27335 | gap 1, overlap 1485456 TGCTCCAAAGAAAAA TGGGGCATG-CACCACCCC CAGC GGGGCAATGGCACGCCCCG TGATGGGAAGTACAT TERM 1203 1485494 - 1485456 - R 84 -13.9 -3.75678 | gap 1, overlap 1485455 GCTCCAAAGAAAAAT GGGGCATG-CACCACCCC CAGC GGGGCAATGGCACGCCCC GTGATGGGAAGTACA Ajs_1418 1485876 - 1485571 - | hypothetical protein Ajs_1419 1486286 - 1485966 - | hypothetical protein Ajs_1420 1487485 - 1486337 - | hypothetical protein TERM 1204 1487390 - 1487402 + g 71 -3.3 -4.58283 | overlap 1487391 CGTGGGTTCGTCGGT CGGGT AGT ACCCA TTTTTGGCGAAATTG TERM 1205 1487502 - 1487477 - G 80 -16.9 -2.77899 | overlap 1487482 GGCGGGGATGAATGA CGGAAGCACGC CAAG GCGTGCCTCCG AGGGTGGGTCAAGCC Ajs_1421 1488158 - 1487511 - | hypothetical protein TERM 1206 1488223 - 1488189 - H 86 -17.8 -2.76046 | overlap 1488178 1488186 TGAACGGGAACAGCA CCGCCCGCTGGGGCAA GTA CTGCCCCAGGGGGTGG AAGAAAACCGCTTGT Ajs_1423 1488439 - 1489401 + | transposase IS116/IS110/IS902 family protein Ajs_1424 1489678 - 1489418 - | hypothetical protein Ajs_1425 1490102 - 1489695 - | hypothetical protein Ajs_1426 1490550 - 1490209 - | hypothetical protein TERM 1207 1490607 - 1490572 - H 91 -11.9 -4.31433 | gap 2, overlap 1490568 1490601 GACCTCCAGAAGAAA GCCGGAG--CCTCCCCC GCAT GGGGAAGGAACCCCGGC GGGTGGATGAAGAAC TERM 1208 1492165 - 1492150 - H 71 -4.7 -4.42386 | TTGCCATTTATAAAA CGTTC TTTGCC GAACG TCTGAAACAGCTTCG TERM 1209 1492953 - 1492983 + G 70 -6.6 -4.21908 | CAAGACCTCGCAGGC GCCGGTGCCGTGGG CGG CCAAGGGCTCAGGC TTTTCGATGCTGATG Ajs_1429 1492681 - 1493922 + | transposase, IS204/IS1001/IS1096/IS1165 family protein Ajs_1430 1494270 - 1493881 - | SwissProt accession number P19593-like protein Ajs_1431 1495757 - 1494669 - | transposase, IS4 family protein Ajs_1433 1496409 - 1496191 - | hypothetical protein TERM 1210 1496462 - 1496439 - R 100 -8 -5.27779 | overlap 1496443 GGGAATAGGAAAAAA GCAAGGCCCC GTGA GGGGCCATGT CGGATCAGAACGAAG TERM 1211 1496458 - 1496443 - R 83 -11.8 -3.9735 | overlap 1496439 ATAGGAAAAAAGCAA GGCCCC GTGA GGGGCC ATGTCGGATCAGAAC Ajs_1434 1497384 - 1496467 - | hypothetical protein TERM 1212 1497722 - 1497706 - R 100 -13.7 -4.64861 | opp_overlap 1497687 TCCGCCCAAAAGAAA GCCCCCA AAC TGGGGGC TTCAAGGGGGACGGG Ajs_1435 1498103 - 1497750 - | hypothetical protein TERM 1213 1498152 - 1498125 - R 100 -17.8 -5.06414 | overlap 1498149 TCTCCTGAAGAAAAA GGCCTTCCACCC GAAT GGATGGAAGGCC TGTGGGACAAGTCGC Ajs_1436 1498404 - 1498183 - | hypothetical protein Ajs_1437 1499213 - 1498401 - | hypothetical protein TERM 1214 1499487 - 1499472 - R 100 -10.4 -5.06414 | TGCGGGCAAGAAAAA GCCCCT CGAA AGGGGC TGGTCGGGTCAGGCT Ajs_1438 1499774 - 1499496 - | hypothetical protein TERM 1215 1499832 - 1499794 - R 76 -7.3 -4.25104 | gap 1, overlap 1499795 1499798 GTGCTCCTATGAAAA TGGACCAGCCCGGCTCCT GGCG AGGAGTCGGGCCGG-CTT GGGGGAGACAAAGAG TERM 1216 1499829 - 1499798 - R 86 -18 -2.77781 | overlap 1499795 1499794 TCCTATGAAAATGGA CCAGCCCGGCTCCT GGCG AGGAGTCGGGCCGG CTTGGGGGAGACAAA Ajs_1439 1500609 - 1499872 - | hypothetical protein Ajs_1440 1501375 - 1500689 - | hypothetical protein TERM 1217 1501481 - 1501446 - R 84 -8.3 -4.48713 | gap 1, overlap 1501447 1501448 1501450 GTGATGAAGAAGAAA TTGAGGGACATG-GCC TTGTG GGCGCATGTCCCTCTC GGGGGGGGAACGAAA TERM 1218 1501480 - 1501447 - R 72 -11.8 -3.28505 | gap 1, overlap 1501446 1501448 1501450 TGATGAAGAAGAAAT TGAGGGACATG-GCC TTGTG GGCGCATGTCCCTCT CGGGGGGGGAACGAA TERM 1219 1501479 - 1501448 - R 77 -15.3 -2.5638 | gap 1, overlap 1501447 1501446 1501450 GATGAAGAAGAAATT GAGGGACATG-GCC TTGTG GGCGCATGTCCCTC TCGGGGGGGGAACGA TERM 1220 1501531 - 1501498 - R 100 -11.7 -4.4078 | gap 1, opp_overlap 1501498, overlap 1501502 1501528 GGGGGGGAACGAAAA GCAGT-GGTGTGCCAG GGA CCGGCTCACCAACCGC TGTAGTTCAGCAGCA Ajs_1441 1501913 - 1501521 - | hypothetical protein TERM 1221 1502463 - 1502443 - R 100 -14 -5.0065 | CAGGGACAAAGAAAA GCCCCGCA ACGAG TGCGGGGC GGTCATGACGGTGCG Ajs_1443 1503248 - 1502490 - | hypothetical protein Ajs_1444 1504910 - 1503291 - | C-5 cytosine-specific DNA methylase TERM 1222 1505006 - 1504977 - R 90 -13.5 -3.96624 | overlap 1504978 GATTGGCAGGAGAAA GGCGCCGAAGGCC TTGC GGCCTTCGGCTCG GGAGGACGGAACCAC TERM 1223 1505005 - 1504978 - R 88 -17 -2.97653 | overlap 1504977 ATTGGCAGGAGAAAG GCGCCGAAGGCC TTGC GGCCTTCGGCTC GGGAGGACGGAACCA TERM 1224 1505229 - 1505188 - R 86 -16.5 -3.21218 | overlap 1505174 ACCGCTGACCACGAA GGGTCTCCGGGTGGCTCGC ACAG GCAAGCCATCGGGGGACCC TTCGCAGCGTGCGGA Ajs_1445 1507448 - 1505436 - | DNA topoisomerase III TERM 1225 1506050 - 1506085 + g 73 -14.7 -2.91873 | gap 1, overlap 1506048 CTTGGCATGCCAGGC CCTCGCGCAGCGCGGG GAGTA CCTG-GCTGCGCGCGG TGGTTTCCCCGTCCT TERM 1226 1507718 - 1507686 - R 72 -14 -2.78596 | TAGCTCGCGAGGACA TGGGGGGCGGCAAC GTACT GCGGCCGCCCCCCC GTCGGATCACTTCCT Ajs_1446 1508177 - 1507725 - | single-strand DNA-binding protein Ajs_1447 1508778 - 1508251 - | putative integrase regulator R protein Ajs_1448 1509569 - 1508775 - | hypothetical protein Ajs_1449 1511235 - 1510000 - | hypothetical protein Ajs_1450 1511798 - 1511238 - | hypothetical protein Ajs_1451 1513469 - 1511814 - | hypothetical protein TERM 1227 1513175 - 1513140 - G 79 -6.8 -4.61231 | gap 1, opp_overlap 1513169 CGATATGCGGAAAAA CTGCTCGTCCT-TGGTC TCC GACCACAGTTCGCGCAG GATCGCCAGCCGCGT Ajs_1452 1513710 - 1513462 - | hypothetical protein Ajs_1453 1514569 - 1513694 - | cobyrinic acid a,c-diamide synthase Ajs_1454 1514824 - 1514612 - | phage transcriptional regulator, AlpA Ajs_1455 1515698 - 1514943 - | hypothetical protein TERM 1228 1516435 - 1516452 + r 100 -11.3 -5.5112 | opp_overlap 1516435 1516428 CTCCAAAATTTGAAA GGGAAGC TACG GCTTCCC TTTTTTATTGGTCGA TERM 1229 1516452 - 1516435 - R 76 -11.3 -3.76413 | opp_overlap 1516435, overlap 1516428 CTCCAAAATTTGAAA GGGAAGC TACG GCTTCCC TTTTTTATTGGTCGA TERM 1230 1517119 - 1517144 + r 95 -11.1 -4.67353 | opp_overlap 1517120, overlap 1517120 GGCACCAACTCAAAA ACCGTTCCTGC GAAA GCGGGAACGGG TTTTTAGCTGGATGG TERM 1231 1517143 - 1517120 - R 100 -12.4 -4.7629 | opp_overlap 1517120 1517119 GCACCAACTCAAAAA CCGTTCCTGC GAAA GCGGGAACGG GTTTTTAGCTGGATG TERM 1232 1517120 - 1517143 + r 83 -14.6 -3.3993 | opp_overlap 1517120, overlap 1517119 GCACCAACTCAAAAA CCGTTCCTGC GAAA GCGGGAACGG GTTTTTAGCTGGATG Ajs_1456 1517435 - 1517148 - | hypothetical protein Ajs_1457 1517557 - 1517823 + | transposase IS3/IS911 family protein Ajs_1459 1519833 - 1518853 - | transposase, IS4 family protein Ajs_1460 1521369 - 1519984 - | heavy metal sensor signal transduction histidine kinase Ajs_1461 1522053 - 1521370 - | two component heavy metal response transcriptional regulator TERM 1233 1522000 - 1522019 + g 88 -10 -4.31688 | GGCCTCGCTCAATCC CTGGCGAA GGTA TTCGCCGG TTTTAGGTTCATCTT Ajs_1463 1522384 - 1522728 + | hypothetical protein Ajs_1464 1522818 - 1523291 + | hypothetical protein Ajs_1465 1523317 - 1523601 + | hypothetical protein Ajs_1466 1523598 - 1524266 + | isoprenylcysteine carboxyl methyltransferase Ajs_1467 1524318 - 1524611 + | heavy metal transport/detoxification protein TERM 1234 1524641 - 1524665 + F 71 -5.6 -4.25848 | gap 1, overlap 1524641 GATTCCGGGTCGACC GG-CTGGGCGC GTCC GCGCCCGCACC TTTTGCTGGCAACTT TERM 1235 1524744 - 1524784 + G 89 -8.2 -5.00895 | gap 1 TCGTTCTGGCGCCGC CCAGCCGGCATGGC-GCTG GCAA CGGCTGCCGTGATCGCTGG TTTTTATCTGCTGCG Ajs_1468 1524696 - 1524944 + | hypothetical protein Ajs_1469 1524948 - 1527281 + | heavy metal translocating P-type ATPase TERM 1236 1527817 - 1527845 + G 81 -8.8 -4.52345 | overlap 1527819 GCGCGACTCCGAAGT CGGGATGGCCAT GCGCG AGGGCCATCCGG TTTATTTCGTGATCT TERM 1237 1528567 - 1528583 + G 76 -2.2 -4.96848 | CCTCACCAACCCGCA TGTCGG CCATC TCGGCA TTTTTGTCTCCGCAG Ajs_1470 1527302 - 1529140 + | hypothetical protein Ajs_1471 1529246 - 1530292 + | YVTN beta-propeller repeat-containing protein Ajs_1472 1530373 - 1530957 + | hypothetical protein TERM 1238 1531011 - 1530988 - T 78 -4.6 -4.73635 | gap 1, overlap 1530979 1530990 GAGAACCCAACAAAA GGTGGCGTTGT TAG ACAA-GCCAGC ACCGTAAGTCCTCTT Ajs_1473 1531535 - 1531200 - | hypothetical protein Ajs_1474 1531945 - 1531538 - | MerR family transcriptional regulator TERM 1239 1532173 - 1532194 + G 100 -10.1 -5.08824 | TCGGCCCATGTTCAT CGGTGCCGC GCTT GTGGCACTG TTTTTTGCGTACAGG Ajs_1475 1531988 - 1532359 + | putative mercuric transport protein Ajs_1476 1532372 - 1532656 + | mercuric transport protein periplasmic component Ajs_1478 1533181 - 1533336 + | hypothetical protein Ajs_1479 1533369 - 1534613 + | membrane protein-like protein Ajs_1480 1534671 - 1534919 + | hypothetical protein TERM 1240 1535462 - 1535426 - g 70 -2.2 -4.62069 | opp_overlap 1535431, overlap 1535427 1535428 GCGCGATTGGAAAAA GTCGC-GCAGGTCCGC TATGCGG GCGGGCTTGCTGCG-C AACAGGATGTGATCC Ajs_1481 1534916 - 1536190 + | outer membrane efflux protein TERM 1241 1536525 - 1536508 - g 73 -9.1 -4.01564 | GAAAAGATTCAGAAA CTCGGCG TTCG CACCGAG GCGGTGAGTCTGCGC TERM 1242 1537012 - 1537038 + G 78 -15.3 -3.16564 | overlap 1537008 TCGGTCTGGGTCATC GCCGATGTCTT CGAGC AAGACATCGGC TTGGTCAAGTCGGGG Ajs_1482 1536187 - 1537800 + | RND family efflux transporter MFP subunit Ajs_1483 1537816 - 1540947 + | CzcA family heavy metal efflux protein Ajs_1485 1542035 - 1541727 - | flagellar hook-basal body complex subunit FliE Ajs_1486 1542464 - 1543726 + | hypothetical protein TERM 1243 1543778 - 1543795 + G 74 -5.5 -4.5442 | TGAGCCAGCGCTTGA CCTTGCC ACGT GGGAAGG TTTTATCGTTGACGC Ajs_1487 1543726 - 1544067 + | hypothetical protein Ajs_1490 1545501 - 1545752 + | hypothetical protein Ajs_1491 1545867 - 1546181 + | hypothetical protein Ajs_1492 1546198 - 1546506 + | heavy metal transport/detoxification protein Ajs_1493 1546523 - 1547206 + | hypothetical protein Ajs_1494 1547678 - 1548946 + | cyclopropane-fatty-acyl-phospholipid synthase Ajs_1495 1549187 - 1551094 + | FtsH-2 peptidase TERM 1244 1551258 - 1551237 - f 72 -3.8 -4.65446 | gap 1, overlap 1551230 ACTACACACACAAAA TCCTG-TGA TCGGC TCAGCAGGA CGGCGTCGAGTTGTG TERM 1245 1551552 - 1551524 - f 78 -15.3 -2.75481 | CGCCAAGTTCAACCA GCCGGTCGAAGAC GAG GTCTTCAGCCGGC GCAACCTGCAAAAGA TERM 1246 1552584 - 1552605 + G 72 -8.7 -4.07568 | gap 1 TGCACTACACGATCG CCGAGGCGCC CAA GG-GCTTCGG TTTTCCGGGCGCGGG TERM 1247 1553412 - 1553361 - g 82 -17.2 -3.05844 | opp_overlap 1553370 1553370 CGGTGGATGCCAATA GCGCGGTAGCGGCCATGCGTGCGG CCTA CCGCACGCATGGCCAGTTCTGGAC CATGGTGGTGCCCAA TERM 1248 1553370 - 1553404 + G 100 -22.3 -3.30441 | gap 1, opp_overlap 1553361, overlap 1553370 CCAATAGCGCGGTAG C-GGCCATGCGTGCGG CCTA CCGCACGCATGGCCAG TTCTGGACCATGGTG TERM 1249 1553370 - 1553403 + G 100 -22.5 -2.5805 | opp_overlap 1553361, overlap 1553370 CCAATAGCGCGGTAG CGGCCATGCGTGCGG CCTA CCGCACGCATGGCCA GTTCTGGACCATGGT Ajs_1497 1551569 - 1553995 + | D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase Ajs_1499 1556170 - 1554548 - | hypothetical protein TERM 1250 1554821 - 1554773 - G 77 -12.3 -3.63515 | gap 1, opp_overlap 1554778 1554808 1554810, overlap 1554774 CCTCAGTTCGAACAA GCGACCGCTGCCGAGCGCGCCG TGCAGC CGGCGCGCG-AGCAGCGCCGGC AGGTCGCTCGCGGCG TERM 1251 1555150 - 1555130 - G 73 -14 -3.15861 | CACGATGGGTAGGAA GAGCGCGC GGTCT GCGCGCTC CACGACCAGCCCCAG Ajs_1500 1556979 - 1556335 - | hypothetical protein TERM 1252 1557528 - 1557573 + r 89 -17.6 -3.14132 | TCAGCCTTGCTCACG GCCGATCCGCTCGGCCTGCA TGGCGT TGTAGACCGGGCCGATCGGC TTGGTGGGCGAGGCG Ajs_1504 1559198 - 1558602 - | hypothetical protein Ajs_1505 1560371 - 1559208 - | peptidase S1 and S6, chymotrypsin/Hap Ajs_1506 1561267 - 1560368 - | phosphoribosylpyrophosphate synthetase Ajs_1507 1562799 - 1561264 - | thymidine phosphorylase TERM 1253 1561927 - 1561938 + g 75 -7.2 -4.41348 | CAGCACATGGGTGGA GCCG GCTG CGGC TTTCTTTGACAGAAC Ajs_1508 1564154 - 1562796 - | beta-lactamase domain-containing protein Ajs_1509 1564677 - 1564180 - | hypothetical protein Ajs_1510 1565558 - 1564680 - | hypothetical protein Ajs_1511 1566169 - 1565555 - | LemA family protein Ajs_1512 1567497 - 1566172 - | major facilitator superfamily transporter Ajs_1513 1570000 - 1567547 - | heavy metal translocating P-type ATPase TERM 1254 1568906 - 1568919 + g 81 -5.2 -4.73613 | overlap 1568902 1568901 1568907 CTTTGTCGCCTGGTA GCGG AAGCTG CCGC TTTTGTTGATGGTCG Ajs_1514 1570867 - 1570022 - | hypothetical protein TERM 1255 1571013 - 1571068 + r 71 -8.2 -3.86524 | opp_overlap 1570996, overlap 1571014 1571016 TGGAGCCGTGCGCCG CCG-GTCGCCGACATCGCGCGGAGCC AGCGGC GGCGC-GCGAGATGTCGTCGGCTCGA TTTCTCACGGCGTAT TERM 1256 1571790 - 1571769 - R 89 -13 -4.13995 | opp_overlap 1571764 CGTTCAGAAAGCAAA TCGCCGCG ACGGCG CGCGGCGA TGGGGTGTCATGCGA Ajs_1519 1573947 - 1572859 - | transposase, IS4 family protein Ajs_1521 1574583 - 1574918 + | hypothetical protein TERM 1257 1575112 - 1575097 - T 70 -11.8 -3.16683 | ACTTGAGCGCATCAA GGCCCG CATA CGGGCC AAGGTGGAACACCCG TERM 1258 1575348 - 1575359 + T 71 -5.8 -4.30987 | opp_overlap 1575335, overlap 1575335 1575345 GAGCTTGGGCACCCT GCCA AGGC TGGC TTTATTCTCACAGGT Ajs_1523 1577734 - 1575551 - | TonB-dependent siderophore receptor Ajs_1524 1580844 - 1578073 - | TraG domain-containing protein Ajs_1525 1582314 - 1580866 - | TraH family protein Ajs_1526 1583199 - 1582324 - | hypothetical protein Ajs_1527 1583605 - 1583210 - | hypothetical protein Ajs_1528 1586013 - 1583596 - | conjugal transfer mating pair stabilization protein TraN TERM 1259 1585896 - 1585937 + g 100 -20.1 -3.64703 | gap 1, overlap 1585871 1585880 GGTTGGCTGCCTGTC CGGCGGCCGT-GCCTTCCTC GTG GGGGCCGGCCACGGCCGCCG TTTGCGTCGCGAGGA Ajs_1529 1586775 - 1586023 - | hypothetical protein Ajs_1530 1587787 - 1586762 - | TraU family protein Ajs_1531 1588422 - 1587784 - | membrane lipoprotein lipid attachment site Ajs_1532 1588802 - 1588419 - | hypothetical protein Ajs_1533 1589398 - 1588814 - | hypothetical protein Ajs_1534 1589751 - 1589395 - | hypothetical protein Ajs_1535 1592330 - 1589748 - | hypothetical protein TERM 1260 1592091 - 1592067 - G 73 -11.3 -3.66803 | GGCGAACAGGTGAAA CTGCAGGCCGG TGC CCGGCGGGCAG TTGGCGTAGAGCGAG Ajs_1536 1592979 - 1592338 - | hypothetical protein Ajs_1537 1593824 - 1592976 - | periplasmic thiol:disulfide interchange protein TERM 1261 1593354 - 1593400 + g 72 -12.9 -3.14602 | gap 1, opp_overlap 1593368, overlap 1593352 GCAGTAGACGCAGTT CGGGTCGCTGAACACGGCCAGC TTGC GCTGGCCGT-TGCCGCGCACCG TCTTGATCGCGTCGG TERM 1262 1593387 - 1593368 - G 74 -15 -3.01712 | opp_overlap 1593354 1593352 TCGGGTCGCTGAACA CGGCCAGC TTGC GCTGGCCG TTGCCGCGCACCGTC Ajs_1538 1595226 - 1593808 - | TraB pilus assembly family protein TERM 1263 1593994 - 1594017 + g 70 -11 -3.53224 | GGCCAGCTTGATGTA GTACTGGGCC AGCC GGTCCAGTGC TTTGCCGACACCGTG Ajs_1539 1596230 - 1595223 - | hypothetical protein Ajs_1540 1596783 - 1596217 - | plasmid-like conjugative transfer protein TraE Ajs_1541 1597097 - 1596798 - | TraL family protein Ajs_1542 1597491 - 1597129 - | hypothetical protein Ajs_1543 1598011 - 1597589 - | hypothetical protein Ajs_1544 1598535 - 1598008 - | lytic transglycosylase, catalytic Ajs_1545 1599174 - 1598677 - | hypothetical protein Ajs_1546 1599686 - 1599378 - | hypothetical protein TERM 1264 1599417 - 1599407 - G 72 -8.2 -4.09685 | overlap 1599408 GCTGAGTGTCGAAAA CGGG CAG CCCG TCAACGACCGGCCCC Ajs_1547 1599827 - 1600099 + | helix-turn-helix domain-containing protein TERM 1265 1600169 - 1600134 - T 73 -6.8 -4.25104 | gap 1 GCGCGCCGATGAAAA TGCG-TGATCGCACGGC CCA GCAGCACGGTCATCGCA ATGGGCGAAGCGGCC Ajs_1548 1600738 - 1600115 - | hypothetical protein Ajs_1549 1602636 - 1600735 - | hypothetical protein Ajs_1550 1604431 - 1602638 - | FHA domain-containing protein Ajs_1551 1605147 - 1604485 - | hypothetical protein Ajs_1552 1605462 - 1605148 - | hypothetical protein Ajs_1553 1605739 - 1606461 + | putative phage repressor TERM 1266 1606488 - 1606518 + T 74 -14.7 -2.59743 | gap 1, opp_overlap 1606488, overlap 1606487 1606483 GCAGGTGCGTGGAAA CG-GGCGGAAGGGG GTAT CCCCTCCCGCCACG GTTCGTCTATGCGTT TERM 1267 1606518 - 1606488 - T 93 -16.9 -3.53444 | gap 1, opp_overlap 1606487 1606483 1606488 GCAGGTGCGTGGAAA CG-GGCGGAAGGGG GTAT CCCCTCCCGCCACG GTTCGTCTATGCGTT Ajs_1554 1607609 - 1606545 - | hypothetical protein TERM 1268 1607675 - 1607638 - g 72 -5.6 -4.4261 | gap 3 GGGGGAACAGGAAAA GCGGGGACGGCAGAGCCCC GGC GGGGAT--GC-ATCCCCGC ATGGGCTGATGAAGG TERM 1269 1607887 - 1607856 - g 91 -12.2 -4.18762 | overlap 1607808 1607857 AACCTGCACTGAAAA GGCCCGGGAGTGGG CGAC CCCACCCCCGAAGC AAACATCACGCGGCG TERM 1270 1607887 - 1607857 - g 72 -13.3 -3.10775 | gap 1, overlap 1607856 ACCTGCACTGAAAAG GC-CCGGGAGTGGG CGAC CCCACCCCCGAAGC AAACATCACGCGGCG Ajs_1555 1607621 - 1607923 + | hypothetical protein Ajs_1556 1608897 - 1607893 - | phage P4 alpha zinc-binding domain-containing protein TERM 1271 1608543 - 1608553 + g 84 -6.8 -4.7373 | overlap 1608536 CTTCGTTCCAGATGC GCTG CAC CAGC TTTTTCATGCGATCC Ajs_1557 1610521 - 1608884 - | ATP-binding region, ATPase-like protein TERM 1272 1610575 - 1610537 - R 75 -11.7 -3.54424 | gap 2, overlap 1610538 GGTGATCTCCTGAAA GGCCAGC-GCCT-GCCCGC ACA GCGGGCGAGCCCGCTGGCG GGGTGAAAGAAATCA TERM 1273 1610574 - 1610538 - R 78 -15.2 -2.72511 | gap 2, overlap 1610537 GTGATCTCCTGAAAG GCCAGC-GCCT-GCCCGC ACA GCGGGCGAGCCCGCTGGC GGGGTGAAAGAAATC TERM 1274 1610605 - 1610588 - R 76 -6.9 -4.41348 | overlap 1610591 GCGGGGTGAAAGAAA TCAGGCG GTGG CGCCGGA TGCGGCCGAGGCGCG Ajs_1558 1610926 - 1610588 - | hypothetical protein TERM 1275 1610668 - 1610642 - G 70 -10.9 -3.61398 | gap 1, opp_overlap 1610641, overlap 1610643 CGGTGCCGTGAACAA CTGGCCGCAGGC GAGG GCCTG-GGCCAA GCTGTGCTGAGAGAA Ajs_1559 1611144 - 1610923 - | hypothetical protein Ajs_1560 1611759 - 1611178 - | hypothetical protein Ajs_1561 1612250 - 1613035 + | hypothetical protein TERM 1276 1613068 - 1613092 + F 78 -14.2 -3.09635 | opp_overlap 1613060 1613059, overlap 1613060 GGACAACCGGCCGCG CGCGGGGCCG TTTGC CGGCGCCGCG TTGAATGCTGCCGGT Ajs_1562 1613465 - 1613704 + | phage transcriptional regulator, AlpA Ajs_1563 1615059 - 1613932 - | hypothetical protein Ajs_1564 1616500 - 1615232 - | hypothetical protein Ajs_1565 1617459 - 1616506 - | phage integrase family protein TERM 1277 1617996 - 1618034 + G 81 -10.8 -4.07568 | opp_overlap 1618009, overlap 1617997 CAAGTCCCCGCTGGT GCCGCGCAACGTACCGTG GTT CACGGTGCGCGGAGCGGA TTTTCCCAACCCGGA TERM 1278 1617997 - 1618033 + G 72 -14.3 -3.04398 | opp_overlap 1618009, overlap 1617996 AAGTCCCCGCTGGTG CCGCGCAACGTACCGTG GTT CACGGTGCGCGGAGCGG ATTTTCCCAACCCGG TERM 1279 1618494 - 1618524 + G 77 -5.3 -4.68593 | opp_overlap 1618502, overlap 1618496 1618496 GCGCTTCCAGGCCAT CGCCCAAATGCGC GGTGG GCGCATCTCGGGG TTTTTGGGTCGTGAC TERM 1280 1618620 - 1618594 - g 73 -9.2 -3.95073 | overlap 1618596 CCGCACATCGACAAA CAGGGGCGAGCG GTG CGCGTGCCCCAG TGGATCATCGAGCTC Ajs_1566 1617751 - 1619034 + | hypothetical protein TERM 1281 1619047 - 1619059 + G 71 -3.3 -4.58395 | opp_overlap 1619047 TGAAGGAGAAAACCA TGCGC ATT GCCCA TTTTTCCGACCTGCA Ajs_1567 1619046 - 1620326 + | metallophosphoesterase Ajs_1568 1622751 - 1620424 - | hypothetical protein TERM 1282 1621168 - 1621183 + g 79 -7.5 -4.56597 | TGTGATGATCCACTT CGCGG CGTCAT CCGCG TTTTTCGACACGCGC Ajs_1569 1623757 - 1622792 - | hypothetical protein Ajs_1570 1624155 - 1623754 - | hypothetical protein TERM 1283 1624933 - 1624903 - g 70 -3.9 -4.55128 | overlap 1624905 ACGCGGAAATCAAAA CACTGCTGGCCGA CCTGC TGGGCCAGGAGCA CATCCGTGAACTGGG Ajs_1571 1624371 - 1626839 + | putative ATPase involved in DNA repair Ajs_1572 1627199 - 1626891 - | hypothetical protein Ajs_1573 1627741 - 1627953 + | hypothetical protein TERM 1284 1628026 - 1627988 - T 93 -17.4 -3.53091 | ATGGGGTGTTGGAAA CACCGAGTCCCCCCGGCC ATG GGCCAGGAGAACTTGGCG CCAGGCTCAGCCGTT Ajs_1574 1628545 - 1628033 - | hypothetical protein TERM 1285 1628819 - 1628765 - g 100 -20.1 -3.17075 | gap 2 GGGGCGCGAACGCAA GACGATC-TCGACCAG-GCGCTGGCCC AAT GGGCCGGCACGCTGGCCGAGGAACGTC CGGAACTGCTGGAGA Ajs_1575 1628672 - 1628902 + | hypothetical protein Ajs_1576 1629391 - 1628873 - | hypothetical protein TERM 1286 1628944 - 1628981 + g 74 -15.6 -2.64155 | overlap 1628941 1628940 CAATCGTGATCCAGC GGTCGGCGATCCGGTC CAGATA GACCAGATCGTCGGCC TCGATTTCGCCCGCC TERM 1287 1629190 - 1629171 - G 72 -13.6 -3.09327 | GCAGGGGACGCAACA GCAGCGCA AGCT TGCGCTGC GGAGCAGGCAGGGGA TERM 1288 1629334 - 1629299 - G 76 -6.2 -4.56597 | gap 2, overlap 1629276 1629300 TCCTTCGGTGAAAAA GGGGAACGCCCAACCC TGGCGG GGACTGGG-GT-CCCC GTTCGGGTGTGCCTC TERM 1289 1629424 - 1629400 - R 72 -12.2 -3.37344 | gap 1, opp_overlap 1629380 CCGGCATGGAATGAA GGCCCTGTGCC TTGC GGCA-AGGGCC CTGGCTCAATGGCGC TERM 1290 1629574 - 1629605 + r 76 -10 -3.86015 | ACGCCAGCAGGGCTG GACTTCGGCGCGGC CGAG GCCGCGAGGAAGGC TTTATGGACGCGATG Ajs_1577 1630963 - 1629842 - | hypothetical protein TERM 1291 1631229 - 1631202 - R 100 -17 -5.7946 | GGCGCAAGAAAAAAA CGCCCCGCCACC TTTC GGTGACAGGGCG TGAACTCAGGCCGCT Ajs_1578 1636163 - 1631235 - | helicase domain-containing protein TERM 1292 1631565 - 1631541 - G 79 -13.5 -3.71848 | CCCCGCGAGGAAGAA CGCCGGCACCG CCT CGGTGCCGATG GCCTGCAGGCCCAGC TERM 1293 1636305 - 1636265 - R 71 -10.9 -3.51232 | overlap 1636266 1636277 GTTCTCCGAAAGGAA GCGGGGAACGCACCGACCC ATG GGGGAGGCGAGCTCCCCGG ATGGGATGGACGAAT TERM 1294 1636304 - 1636266 - R 75 -14.4 -2.70525 | overlap 1636265 1636277 TTCTCCGAAAGGAAG CGGGGAACGCACCGACCC ATG GGGGAGGCGAGCTCCCCG GATGGGATGGACGAA Ajs_1579 1636904 - 1636599 - | hypothetical protein TERM 1295 1636962 - 1636929 - R 100 -15.3 -4.99043 | overlap 1636892 1636933 CTTCGAGAAAGAAAA GGAGCCATGGCACCC GATG GGACGACATGGCTCC ATCGGGTGGATGGAA Ajs_1580 1637729 - 1637058 - | hypothetical protein TERM 1296 1637529 - 1637550 + g 80 -17.3 -2.73364 | CAGCGGTGATCGACC CCAGGCCGC GATG GCGGCCTGG TACTTGGCGTAGCCG TERM 1297 1637822 - 1637799 - R 86 -16 -3.14132 | opp_overlap 1637792 GGTTGGTCGGATCAA GCGCGGATGC GGTA GCACCCGCGC AAATCCTTGGCTTCA Ajs_1581 1638521 - 1637835 - | hypothetical protein Ajs_1582 1638930 - 1639604 + | hypothetical protein Ajs_1583 1639601 - 1640248 + | hypothetical protein TERM 1298 1641270 - 1641287 + G 81 -4.1 -5.00884 | overlap 1641272 GAGCATCAAGGGGCG TTCCGAG CTTT TTCGGGA TTTTTTGAAAGGCAT Ajs_1584 1640335 - 1641957 + | putative EA59 gene protein, phage lambda Ajs_1585 1641959 - 1642804 + | putative EA31 gene protein, phage lambda Ajs_1586 1643095 - 1643709 + | hypothetical protein TERM 1299 1644169 - 1644197 + G 70 -3.7 -4.52857 | opp_overlap 1644172, overlap 1644170 1644172 CGAGGACGGCGGCTG AAACAGCCTTGCC GAT GGTCAGGCTGTCG TTTTCTGTCGAACCT Ajs_1587 1644072 - 1644572 + | DNA binding domain-containing protein Ajs_1588 1644569 - 1645183 + | hypothetical protein Ajs_1589 1645805 - 1645266 - | histone family protein DNA-binding protein TERM 1300 1645722 - 1645744 + g 72 -5.6 -4.36914 | gap 1, opp_overlap 1645707 TTGCGCTACGGCATC TGGGCGCGT CGCGCA ACG-GCCCA TTTTATCGAGCGGGC Ajs_1590 1645904 - 1646404 + | hypothetical protein Ajs_1591 1646489 - 1648252 + | ParB family protein TERM 1301 1648260 - 1648287 + F 77 -13.4 -3.3452 | gap 1, overlap 1648261 TGGCCTGACGTGCCA ACCGGC-CCCTGG ACA CCAGGGAGCCGGG TTCTAGCATGGTCTG TERM 1302 1648261 - 1648286 + F 83 -16.9 -2.6039 | gap 1, overlap 1648260 GGCCTGACGTGCCAA CCGGC-CCCTGG ACA CCAGGGAGCCGG GTTCTAGCATGGTCT Ajs_1592 1648351 - 1648833 + | hypothetical protein TERM 1303 1648881 - 1648905 + F 70 -12.2 -3.14132 | opp_overlap 1648879 1648883 1648892 GCGGGAGACTGAACG CATGGCAACC ACGGC GGTTGCCGTG TTCATCCCCAAGGAG Ajs_1593 1648929 - 1649372 + | hypothetical protein TERM 1304 1650067 - 1650040 - g 75 -3.2 -4.82901 | overlap 1650042 GCGGCCCGACAAAAA TGCGGGAGGGCG CGAG CGCACCCAGGCA TGGCGACCATGCAGC Ajs_1594 1649384 - 1650433 + | hypothetical protein TERM 1305 1650670 - 1650684 + G 77 -7 -4.56597 | overlap 1650669 GCCTTGCTCCAGCGC GCGGCC CAC GGCGGC TTTTTGCCCGAGACG Ajs_1595 1650463 - 1651203 + | hypothetical protein TERM 1306 1651653 - 1651667 + G 73 -12.8 -3.40403 | GACCTGCACACGCAT GGCCGG GCA CCGGCC TTCTGGTCGGGCGAG Ajs_1596 1651200 - 1651916 + | hypothetical protein TERM 1307 1652669 - 1652654 - g 72 -11.8 -3.53224 | opp_overlap 1652650 GAGCTGTTCTCCAAA GGGCGG CTGT CCGCCC ACGGTGTCGTCATCA Ajs_1597 1651970 - 1652824 + | UBA/THIF-type NAD/FAD binding protein Ajs_1598 1653122 - 1653475 + | nucleoid protein H-NS Ajs_1599 1654610 - 1653480 - | hypothetical protein TERM 1308 1654764 - 1654726 - H 81 -15.2 -3.05384 | overlap 1654729 CGGGTGGTCAGGCAA GCACGGCGACACGCGG GACCACA CCGCGTGCCGCCGACC CAAGGGTTGCGCCAG TERM 1309 1654761 - 1654729 - H 90 -19.9 -2.75064 | overlap 1654726 GTGGTCAGGCAAGCA CGGCGACACGCGG GACCACA CCGCGTGCCGCCG ACCCAAGGGTTGCGC TERM 1310 1655252 - 1655215 - H 71 -5.4 -4.49556 | gap 1, overlap 1655211 1655216 1655217 GCTCTACGAAACAAA CCTCGG-AGCGGTCGCC TCGGG GGCGACGGCCACCCCGG CTCGGGGCCGGGGCT Ajs_1600 1655811 - 1656842 + | hypothetical protein Ajs_1601 1656839 - 1657114 + | hypothetical protein TERM 1311 1657305 - 1657325 + G 81 -12.5 -3.86822 | opp_overlap 1657309 GAGGAGGGCTTGGCA GCAACGGCG GAT CGCCGGTGC TTTGTGGCCACCTTC Ajs_1602 1657122 - 1657568 + | hypothetical protein TERM 1312 1657886 - 1657902 + G 72 -4.3 -4.44245 | CATCAGACAGGCGAG GCGGTTG AGC CATTCGC TTTTGTCACTGCTCT Ajs_1603 1657565 - 1658110 + | hypothetical protein Ajs_1604 1658441 - 1659820 + | phage integrase family protein TERM 1313 1660272 - 1660247 - f 100 -14.1 -5.27779 | opp_overlap 1660247 GCCAATATCAAAAAA GCCACTGCAAA ATTA TTTGCAGCGGC TTTTTTTGTGTTTTC TERM 1314 1660247 - 1660272 + F 100 -11.9 -5.9362 | opp_overlap 1660247 GCCAATATCAAAAAA GCCACTGCAAA ATTA TTTGCAGCGGC TTTTTTTGTGTTTTC Ajs_1605 1660458 - 1660709 + | hypothetical protein Ajs_1606 1661569 - 1660811 - | short-chain dehydrogenase/reductase SDR TERM 1315 1661665 - 1661638 - R 100 -17.8 -4.38712 | gap 1, overlap 1661642 GGCACTCCTAGAAAA GCAACAGCCCGGC AGG GCCGGGCTGT-GC GCAAGGGGCAGAGGG TERM 1316 1661662 - 1661642 - R 100 -18.3 -3.75115 | overlap 1661638 CTCCTAGAAAAGCAA CAGCCCGGC AGG GCCGGGCTG TGCGCAAGGGGCAGA Ajs_1607 1662731 - 1661682 - | extracellular solute-binding protein TERM 1317 1662891 - 1662874 - R 100 -12.7 -5.72207 | opp_overlap 1662874 TTGAAACGAAAAAAA TGCCCGC GGAC GCGGGCA TTTGCTTGTCGAGCA TERM 1318 1662874 - 1662891 + r 86 -12.7 -3.9941 | opp_overlap 1662874 TTGAAACGAAAAAAA TGCCCGC GGAC GCGGGCA TTTGCTTGTCGAGCA Ajs_1608 1664756 - 1662915 - | glutaminyl-tRNA synthetase TERM 1319 1664629 - 1664648 + g 77 -5.7 -4.59773 | gap 1, overlap 1664630 TGGTGGGCTGCGTCG C-CTGGGC TGCCC GCCCAGTG TTTTTGGGCATGCAC TERM 1320 1664630 - 1664646 + g 73 -9.4 -3.91506 | overlap 1664629 GGTGGGCTGCGTCGC CTGGGC TGCCC GCCCAG TGTTTTTGGGCATGC Ajs_1609 1664969 - 1665322 + | hypothetical protein Ajs_1610 1665406 - 1665852 + | 3-dehydroquinate dehydratase Ajs_1611 1665846 - 1666736 + | alpha/beta hydrolase fold TERM 1321 1667012 - 1666983 - g 73 -15.7 -2.52291 | opp_overlap 1666987, overlap 1666982 1666980 AAGGCACAGCAATAC CGCACCCAGGAGG CCAA CCGCCTGGATGCG TTGGCGCGCCTGCAG Ajs_1612 1666746 - 1667171 + | class I peptide chain release factor Ajs_1613 1667284 - 1668120 + | extradiol ring-cleavage dioxygenase III subunit B Ajs_1614 1668146 - 1668811 + | phospholipase/carboxylesterase TERM 1322 1669888 - 1669834 - g 73 -15 -2.89564 | gap 3 TGGCCACTGGAGACA TGGC-GGCGGGCAACGTCG-C-GCGCC TACC GGCGCAGGCGACGCCGCCTGCCAGCCG CTGACCGCTACGGCG Ajs_1615 1668966 - 1669892 + | hypothetical protein Ajs_1616 1670363 - 1669896 - | AsnC family transcriptional regulator TERM 1323 1670551 - 1670602 + G 100 -19.5 -3.96148 | gap 2, opp_overlap 1670542 1670541 GGAAACCGCCGAATG GCGCGACGCCCTGCAGGCCCTGGTG GCCA CGGCAGGGCCTG-AGCGCG-CGCGC TTTCTGCTGGACGAG TERM 1324 1670906 - 1670923 + G 84 -9.1 -4.56597 | CTGGGCGAAGGCCAG CACCGGG GCGA CCTGGTG TTTTTCCAGCCGCAC TERM 1325 1671817 - 1671838 + G 71 -12.3 -3.28712 | gap 1 CCTGCCCTTGAGCGA CGCTCAGGCC ACG GGCCTG-GCG TTCTACAAGCCGGGG TERM 1326 1672561 - 1672577 + G 73 -3.5 -4.68724 | overlap 1672559 CATGCGCGAGATGGT CGCCGAG CAG CGCGACG TTTTCTATTACGTCA Ajs_1617 1670420 - 1673137 + | 2-oxoacid dehydrogenase subunit E1 Ajs_1618 1674026 - 1673169 - | hypothetical protein Ajs_1619 1674813 - 1674031 - | UDP-2,3-diacylglucosamine hydrolase Ajs_1620 1675349 - 1674810 - | peptidyl-prolyl cis-trans isomerase, cyclophilin type Ajs_1621 1675955 - 1675368 - | peptidylprolyl isomerase Ajs_1622 1676609 - 1676037 - | TPR repeat-containing protein TERM 1327 1676251 - 1676267 + g 73 -3.5 -4.60889 | overlap 1676252 GTGCGGATCGCCGTC TCCAGCG CTG CGCGGGC TTTTTCCAACTGGTT Ajs_1623 1676863 - 1678239 + | cysteinyl-tRNA synthetase Ajs_1624 1678285 - 1678944 + | HhH-GPD family protein Ajs_1625 1678993 - 1679970 + | acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha TERM 1328 1680034 - 1680017 - f 86 -8.3 -4.58395 | opp_overlap 1680017 CCGATCCTTGAAAAA GGTGGGG GAAT CCCCGCC TTTTTTTGTCACTTA TERM 1329 1680017 - 1680034 + F 100 -10.5 -5.66684 | opp_overlap 1680017 CCGATCCTTGAAAAA GGTGGGG GAAT CCCCGCC TTTTTTTGTCACTTA TERM 1330 1680414 - 1680432 + F 76 -7.3 -4.25104 | opp_overlap 1680424 1680425 CAGCTACTTTGGCTA CGCCGAC AAACG GACGGCG TTTTCGTCGCCCCAG TERM 1331 1681330 - 1681278 - f 83 -16.1 -2.94218 | overlap 1681319 AGCCTGCAGCAGACA GCCGCCTCGATGCAGCAGCTCACCG AGA CGGTGCGCCACAACGCCGACGCGGC CCGCCAGGCCAACCA Ajs_1627 1682059 - 1683066 + | tRNA(Ile)-lysidine synthetase TERM 1332 1683907 - 1683893 - g 79 -4.2 -4.86939 | GAACAAATGGAAAAA GCCG TCGTATC CGGC ATCGCTTTCACCCGC Ajs_1628 1683104 - 1684372 + | aspartate kinase TERM 1333 1684543 - 1684513 - T 76 -12.7 -3.53012 | opp_overlap 1684520, overlap 1684520 TCCGTTTCCGCCAAA CAAAAAACGCGCC TTCAT GGCGCGTTTTTTT ATGCCGGCGGCGATG TERM 1334 1684536 - 1684520 - T 100 -10.8 -5.63517 | opp_overlap 1684520, overlap 1684513 CCGCCAAACAAAAAA CGCGCC TTCAT GGCGCG TTTTTTTATGCCGGC TERM 1335 1684520 - 1684536 + T 100 -10.8 -5.60993 | opp_overlap 1684520 1684513 CCGCCAAACAAAAAA CGCGCC TTCAT GGCGCG TTTTTTTATGCCGGC Ajs_1629 1685055 - 1684576 - | hypothetical protein TERM 1336 1685057 - 1685031 - G 86 -18 -2.87564 | TGAGGGCGTTATAGA GCATGGCGGCGC ATT GTGCCGCCATGC CGGTCGATGCGGGCC Ajs_1630 1687480 - 1685111 - | 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase TERM 1337 1685927 - 1685962 + g 73 -13.2 -3.25015 | overlap 1685935 CACCATGTCGTTACG CTCGGCCTCGCCGTGC ACCA GCACGTCCAGGCCCAG TTCCTCCTGCTTGCG Ajs_1631 1687578 - 1688507 + | LysR family transcriptional regulator Ajs_1632 1689414 - 1688554 - | 2,3-dimethylmalate lyase TERM 1338 1689548 - 1689538 - R 72 -2.4 -4.72272 | overlap 1689539 1689540 CGTTGCGATCAAAAA GGGC CAG GCGC AAGGCGCCAAACGAA TERM 1339 1689582 - 1689564 - R 83 -14.6 -3.51976 | overlap 1689560 AAGGCGCCAAACGAA GCTGGGGT GCT ACCCCAGC GAGGCTTGGCAACGC Ajs_1633 1691068 - 1689866 - | methylitaconate delta2-delta3-isomerase acnA 1693754 - 1691082 - | aconitate hydratase TERM 1340 1693177 - 1693210 + g 86 -5.9 -5.055 | AAGGCGACCTTGCCC TGTCCATCGTCCTGC ACGT GCACGACGGGCGACA TTTTTTCCAGATTGA Ajs_1635 1695021 - 1693861 - | methylcitrate synthase Ajs_1636 1695434 - 1695018 - | thioesterase superfamily protein TERM 1341 1696522 - 1696540 + G 84 -13.8 -3.99374 | CACCCTGCAGCGCCC CGGCGCGC GCG GCGTGCCG TTCTTCTTCATCCGC Ajs_1637 1695536 - 1697008 + | XRE family transcriptional regulator TERM 1342 1697065 - 1697120 + F 93 -7.5 -5.00616 | overlap 1697083 TGTGTCCTACACCGT GATGCGCCCCTGGCGAAC-CGCCCCGC CGCA GCGG-GCGTGTCTACCATGCGTGCATC TTTTTTCGGCAAACG Ajs_1638 1697145 - 1697447 + | hypothetical protein TERM 1343 1697469 - 1697503 + T 73 -11.4 -3.62096 | GGCATAGCGCTTCGG GCATAGCGCGCACG GCCCGTG TGGGCGCGCTGTGC TTTCGCGTCGTGGGG Ajs_1639 1697997 - 1697572 - | RNA-binding S4 domain-containing protein TERM 1344 1697872 - 1697901 + g 77 -13.5 -3.60948 | TTCACGCGCGGCTTT GGCCGCCTGGCCG TTGA CGGTTACGCGGCC TTTGCCGATCTCTTC Ajs_1640 1699441 - 1698038 - | integral membrane sensor signal transduction histidine kinase Ajs_1641 1700345 - 1699614 - | two component transcriptional regulator TERM 1345 1699665 - 1699682 + g 79 -2.5 -5.00616 | overlap 1699667 CAGCGTCATCAGGGC CACGCCG GTGC CTGCGAG TTTTTTGCGCACGCG TERM 1346 1701140 - 1701104 - g 70 -11.6 -3.36273 | gap 2 CGCGGGCAAGATGAA GCCCATC-GGCG-TGACC TCG GGCCAGCGCCTGAAGGGC GTGAACGTGCCCACG Ajs_1642 1700448 - 1701407 + | hypothetical protein TERM 1347 1701413 - 1701437 + F 74 -13.5 -2.93623 | overlap 1701411 1701413 1701412 AATGGTCTAAGCCCG GCGGCGCCGCA GTG TGCTGCGTCGC TCCTCTTTTGAGAGC Ajs_1643 1701541 - 1702092 + | hypothetical protein TERM 1348 1703133 - 1703115 - g 78 -13.8 -3.62046 | overlap 1703086 CGAGGCGGCCAACAA CGCCACGG TGA CCGCGGCG CTCATCCCGCTGCTG Ajs_1644 1702183 - 1703712 + | hypothetical protein TERM 1349 1703817 - 1703768 - f 71 -11.3 -3.51934 | gap 1, overlap 1703766 GCGGCCCTAGAAAGA GTGCGCCGGGTACC-GCCGCGC AAGCGCA GCGCGGCCAGCGCCCGGGGGAC GGCCGCCCCCGGGAC Ajs_1645 1703940 - 1704278 + | hypothetical protein Ajs_1646 1704238 - 1705116 + | alpha/beta hydrolase fold Ajs_1647 1705279 - 1706238 + | rhodanese domain-containing protein TERM 1350 1706256 - 1706289 + T 95 -19.7 -3.28712 | opp_overlap 1706261 1706264, overlap 1706257 1706264 CCGCTCGCCGCGCCA AGCAACAAGGCCTCC GTGT GGAGGCCTTGTTGCG TTGTGCGCGGAGAAG TERM 1351 1706257 - 1706288 + T 100 -23.2 -2.57132 | opp_overlap 1706261 1706264, overlap 1706256 1706264 CGCTCGCCGCGCCAA GCAACAAGGCCTCC GTGT GGAGGCCTTGTTGC GTTGTGCGCGGAGAA TERM 1352 1706284 - 1706261 - T 88 -16.8 -3.33696 | opp_overlap 1706257 1706256 1706264, overlap 1706264 CGCCGCGCCAAGCAA CAAGGCCTCC GTGT GGAGGCCTTG TTGCGTTGTGCGCGG TERM 1353 1706281 - 1706264 - T 81 -12.7 -3.81146 | opp_overlap 1706257 1706256 1706264, overlap 1706261 CGCGCCAAGCAACAA GGCCTCC GTGT GGAGGCC TTGTTGCGTTGTGCG TERM 1354 1706264 - 1706281 + T 81 -12.7 -3.75766 | opp_overlap 1706264 1706261, overlap 1706257 1706256 CGCGCCAAGCAACAA GGCCTCC GTGT GGAGGCC TTGTTGCGTTGTGCG Ajs_1648 1706476 - 1706309 - | hypothetical protein Ajs_1649 1707593 - 1706496 - | protein of unknown function DUF395, YeeE/YedE TERM 1355 1706833 - 1706867 + g 78 -9.9 -4.07568 | gap 1 CTCCAGAACCAGTTG CCCG-CCAGGTCCGCG GCAC CGCTGGCCTGGGCGAG TTTTGCCGCCCACAG TERM 1356 1707574 - 1707560 - G 71 -2.7 -4.65916 | overlap 1707561 GCCAGCCCAAGAAAA TGGCC AGCAG GGCCG CAAGAGGGAGTCGTT TERM 1357 1707659 - 1707619 - R 93 -8.9 -5.14477 | opp_overlap 1707620 1707620, overlap 1707620 1707623 CAGAGATTCAAAAAA GTGAGCTGCTAGCGCTTGC CTG GCAAGCGCTAGAGGCCGAT TTGGCTATGAAGCTG TERM 1358 1707620 - 1707657 + r 72 -13.5 -2.82327 | gap 1, opp_overlap 1707620 1707619 1707623, overlap 1707620 AGAGATTCAAAAAAG TGAGCTGCTAGCGCTTGC CTG GCAAGCGCTAGAGGC-CG ATTTGGCTATGAAGC TERM 1359 1707620 - 1707658 + r 78 -12.4 -3.7108 | opp_overlap 1707620 1707619 1707623, overlap 1707620 AGAGATTCAAAAAAG TGAGCTGCTAGCGCTTGC CTG GCAAGCGCTAGAGGCCGA TTTGGCTATGAAGCT TERM 1360 1707658 - 1707620 - R 75 -12.4 -3.67602 | opp_overlap 1707620 1707620, overlap 1707619 1707623 AGAGATTCAAAAAAG TGAGCTGCTAGCGCTTGC CTG GCAAGCGCTAGAGGCCGA TTTGGCTATGAAGCT TERM 1361 1707655 - 1707623 - R 83 -16.3 -2.93182 | opp_overlap 1707620 1707620, overlap 1707620 1707619 GATTCAAAAAAGTGA GCTGCTAGCGCTTGC CTG GCAAGCGCTAGAGGC CGATTTGGCTATGAA Ajs_1650 1708654 - 1707701 - | rhodanese domain-containing protein TERM 1362 1711112 - 1711163 + r 100 -25.8 -2.78384 | opp_overlap 1711114 AACCGGGCCGCATCG AACGCGCGCTGCTGGCCGATCCAC GGCA GGGGCTCGGCCAGCAGCGCGCGCG TGTCGTCAAAGCCCA TERM 1363 1711161 - 1711114 - R 100 -32.8 -3.05384 | opp_overlap 1711112 CCGGGCCGCATCGAA CGCGCGCTGCTGGCCGATCCAC GGCA GGGGCTCGGCCAGCAGCGCGCG CGTGTCGTCAAAGCC Ajs_1652 1712297 - 1711239 - | ferrochelatase Ajs_1653 1712337 - 1713029 + | HAD family hydrolase Ajs_1654 1715780 - 1713042 - | ATPase, P-type (transporting), HAD superfamily, subfamily IC TERM 1364 1714193 - 1714218 + g 73 -14 -3.15544 | TGTCGGCGAACTGCA GCGCGTGCTG CTGCGC CGGCACGCGC TTGATGGCGATCGCC Ajs_1655 1716948 - 1716127 - | alpha/beta hydrolase fold TERM 1365 1716740 - 1716758 + g 72 -5.8 -4.34402 | GCCTGCTCCACGCTT GCAGGGGC ATC GCCCGCGC TTTTGCTGTGGCCGG Ajs_1656 1718261 - 1716948 - | O-acetylhomoserine aminocarboxypropyltransferase TERM 1366 1717272 - 1717232 - G 73 -14 -3.09492 | gap 1 GGTCGAAGCTGAACA CCGAGCCCGCGCCGCGC GGCAGCAG GCGCTGCGCGAGCT-GG TGGCTGGGGTGGGAC TERM 1367 1718564 - 1718545 - g 77 -3.5 -4.72272 | GGCGCTGACGAAAAA TGGTGGC GGCGTG GGCACCA TGCTGGTGCGTACCG Ajs_1657 1718360 - 1718815 + | XRE family transcriptional regulator TERM 1368 1718866 - 1718830 - f 100 -25.4 -4.25283 | opp_overlap 1718830 ATTTGGTGATCAAAA TAGCTGCCAGCGCTTG TCAAT CAAGCGCTGGCAGCTA TTTTTTTGGTAGTAA TERM 1369 1718830 - 1718866 + F 100 -25.4 -5.55664 | opp_overlap 1718830 ATTTGGTGATCAAAA TAGCTGCCAGCGCTTG TCAAT CAAGCGCTGGCAGCTA TTTTTTTGGTAGTAA Ajs_1658 1718909 - 1720009 + | chorismate synthase TERM 1370 1720055 - 1720020 - T 76 -6 -4.59773 | gap 1, overlap 1720021 1720022 GGTGATGGTCAAAAA CGGCT-GTAGCGCCCGC CCA GTGGGCGCTGCCAGCTA TCAATAGAAGAGCAA Ajs_1659 1720535 - 1720086 - | transcriptional regulator NrdR Ajs_1660 1721792 - 1720548 - | serine hydroxymethyltransferase TERM 1371 1720719 - 1720737 + g 78 -10.2 -4.12902 | CGTGCCCACGCGAAT GCCGCTGG TGA CCATCGGC TTTTCGGGATCGTTG Ajs_1661 1722869 - 1722030 - | lytic transglycosylase, catalytic TERM 1372 1723142 - 1723159 + H 76 -5.6 -4.59109 | AAAAGTTCTGTTATA TCTGTG GGAAAG CACAGA TTTTTCACGCATGTC TERM 1373 1723469 - 1723507 + H 100 -11.1 -5.63857 | gap 1, opp_overlap 1723452, overlap 1723473 CCGTTGTGTCAGCCG TCAAGCCCGGTGTGCGAA GAAG TTCG-ACACCGGGCTTTC TTTTTTTGCGTTTTT TERM 1374 1723473 - 1723503 + H 100 -16.3 -5.21683 | gap 1, overlap 1723469 TGTGTCAGCCGTCAA GCCCGGTGTGCGAA GAAG TTCG-ACACCGGGC TTTCTTTTTTTGCGT Ajs_1662 1723588 - 1727295 + | hypothetical protein TERM 1375 1728507 - 1728456 - g 71 -9.2 -3.78953 | opp_overlap 1728495, overlap 1728457 AGCTGGAGCAGGAAA CCGCGCAGGGCCATGGCAAGGCCA GCGC TGGCGCCGCGACTGCGCTGCGCGC CGTGCTTAAGGTACA Ajs_1663 1727504 - 1730191 + | hypothetical protein Ajs_1664 1730824 - 1730261 - | BadM/Rrf2 family transcriptional regulator Ajs_1665 1731475 - 1730969 - | hypothetical protein Ajs_1666 1731547 - 1732371 + | N-formylglutamate amidohydrolase Ajs_1667 1732389 - 1732649 + | hypothetical protein Ajs_1668 1733561 - 1732680 - | phosphatidylserine decarboxylase TERM 1376 1733059 - 1733049 - G 72 -6.8 -4.21812 | GTTCACTGAAAACAA TGCC CCA GGCA CATGGTCCATACGCA TERM 1377 1734333 - 1734318 - g 72 -11.8 -3.5511 | overlap 1734316 CCGCATGCACAAAGA GCGCGG GGGG CCGCGC ATAAGGGATCTGGCG Ajs_1669 1733742 - 1734911 + | CBS domain-containing protein TERM 1378 1735055 - 1735079 + F 91 -17.9 -3.14564 | overlap 1735060 1735062 CCTTGCTTCGAGCCC CTCAAGGGCCG ATG CGGCCCTTGGG TTAGTGGACGCATCG TERM 1379 1735060 - 1735074 + F 73 -12.8 -3.20723 | overlap 1735055 1735062 CTTCGAGCCCCTCAA GGGCCG ATG CGGCCC TTGGGTTAGTGGACG TERM 1380 1735062 - 1735096 + F 100 -12.8 -4.56597 | overlap 1735060 1735055 TCGAGCCCCTCAAGG GCCGATGCGGCCCTTG GGT TAGTGGACGCATCGGC TTTTTCCAGGCGCCG Ajs_1670 1735148 - 1735414 + | translation initiation factor 1 TERM 1381 1735565 - 1735590 + F 100 -17.7 -4.95487 | opp_overlap 1735565 GACCAATTGAATCAA GGGGTTAGGTC TATT GACCTAACCCC TTTTGTCTTTGTTTT TERM 1382 1735590 - 1735565 - f 95 -17.7 -3.41234 | opp_overlap 1735565 GACCAATTGAATCAA GGGGTTAGGTC TATT GACCTAACCCC TTTTGTCTTTGTTTT Ajs_1671 1735730 - 1736032 + | hypothetical protein TERM 1383 1736132 - 1736152 + F 93 -9.7 -4.74801 | opp_overlap 1736132 AGGGGGATCATTGAA GGCTGGC TTGAAGC GCCAGCC TTTTTCCTGGACTTG Ajs_1672 1736179 - 1736949 + | hypothetical protein TERM 1384 1736954 - 1736971 + T 79 -14.1 -3.40403 | opp_overlap 1736954 GACGGGCATAAAAAA CGCGGCC CGAA GGCCGCG TTGTAGTGCGCGAGG TERM 1385 1736971 - 1736954 - T 100 -14.1 -5.252 | opp_overlap 1736954 GACGGGCATAAAAAA CGCGGCC CGAA GGCCGCG TTGTAGTGCGCGAGG Ajs_1673 1737784 - 1736999 - | PpiC-type peptidyl-prolyl cis-trans isomerase TERM 1386 1737685 - 1737707 + g 81 -10.6 -4.07568 | GTTCCTTGGGAACCG CCTTGCCATT GAC GATGGCGAGG TTTTGCGCGGCAACG Ajs_1674 1738130 - 1737852 - | transcriptional regulator BolA Ajs_1675 1738687 - 1738127 - | intracellular septation protein A TERM 1387 1738349 - 1738313 - G 79 -7.9 -4.57073 | CATGGTGGCGAAAAA GCCCGTCCAGCCCCA GTTCAGG TTGCGCCAGACGGGC GCGGGCAGATCGATC Ajs_1676 1739097 - 1738684 - | methionine-R-sulfoxide reductase TERM 1388 1738883 - 1738873 - G 72 -6.8 -4.2803 | overlap 1738874 CACGGCAAGCGAAAA GCTG GGC CAGC CGCAGCCCGCGTCGA Ajs_1677 1740581 - 1739094 - | hypothetical protein TERM 1389 1742148 - 1742118 - g 87 -16.9 -3.39803 | opp_overlap 1742112 CATTGACATCGAGAA CATCGCCATGGCG CACCC CGCCGTGGCGATG GCGGCCTGTGTCGGC Ajs_1678 1740754 - 1742391 + | acyl-CoA synthetase Ajs_1679 1742529 - 1743764 + | extracellular ligand-binding receptor TERM 1390 1743792 - 1743811 + F 100 -15 -5.44721 | TGGGACGACCTTTGG GGCCCGAG TCTC CTCGGGCC TTTTTTTCACCTGCT Ajs_1680 1743840 - 1744793 + | inner-membrane translocator Ajs_1681 1744800 - 1746137 + | inner-membrane translocator Ajs_1682 1746137 - 1746919 + | ABC transporter related Ajs_1683 1746923 - 1747618 + | ABC transporter related Ajs_1684 1747811 - 1749910 + | short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase TERM 1391 1750508 - 1750483 - g 76 -8.2 -4.2828 | gap 1, opp_overlap 1750483 CGCCAGCCAGCAAAA GGCCTGC-GCC GCCCA GGCAGCCGGCC TGTTCGACGCCGAGA Ajs_1685 1749956 - 1751131 + | acetyl-CoA acetyltransferase TERM 1392 1751159 - 1751202 + F 100 -24.7 -5.13722 | opp_overlap 1751160 1751163, overlap 1751160 1751164 TTTCGGACTGAAACA ACAAGCGCCCCGCGCAGAC GATGTG GTCTGCGCGGGGCGTTTGC TTTTATTTTGATAGC TERM 1393 1751201 - 1751160 - f 100 -26 -3.96216 | opp_overlap 1751159 1751160 1751164, overlap 1751163 TTCGGACTGAAACAA CAAGCGCCCCGCGCAGAC GATGTG GTCTGCGCGGGGCGTTTG CTTTTATTTTGATAG TERM 1394 1751160 - 1751201 + F 100 -28.2 -3.67149 | opp_overlap 1751160 1751163, overlap 1751159 1751164 TTCGGACTGAAACAA CAAGCGCCCCGCGCAGAC GATGTG GTCTGCGCGGGGCGTTTG CTTTTATTTTGATAG TERM 1395 1751198 - 1751163 - f 100 -21.9 -4.10744 | opp_overlap 1751160 1751159 1751164, overlap 1751160 GGACTGAAACAACAA GCGCCCCGCGCAGAC GATGTG GTCTGCGCGGGGCGT TTGCTTTTATTTTGA TERM 1396 1751164 - 1751197 + F 100 -25.4 -4.41486 | opp_overlap 1751163 1751160, overlap 1751160 1751159 GACTGAAACAACAAG CGCCCCGCGCAGAC GATGTG GTCTGCGCGGGGCG TTTGCTTTTATTTTG TERM 1397 1751843 - 1751862 + G 89 -2.8 -5.31275 | GCTACGCCATGCTTT CAGGGG GATCGGCA CTCCTG TTTTTTGTGATGGCC TERM 1398 1752618 - 1752568 - g 100 -19.6 -3.61398 | opp_overlap 1752568, overlap 1752569 1752609 GCGGCCCTGCAACAA GCCGACGCGGCTCTGTACCGCGGC AAA GCCGCGGGACGCAACCGCGTCGAA ACGGCCGGGCCGTCT TERM 1399 1752617 - 1752569 - g 100 -23.1 -2.76696 | opp_overlap 1752568, overlap 1752568 1752609 CGGCCCTGCAACAAG CCGACGCGGCTCTGTACCGCGGC AAA GCCGCGGGACGCAACCGCGTCGA AACGGCCGGGCCGTC Ajs_1686 1751473 - 1752657 + | diguanylate cyclase Ajs_1687 1752727 - 1754655 + | acyl-CoA dehydrogenase domain-containing protein Ajs_1688 1754716 - 1755216 + | NAD(P)H dehydrogenase (quinone) TERM 1400 1755328 - 1755346 + T 73 -3.1 -4.71828 | overlap 1755327 GCGCTTGACCCTTGG GGCGA AGCCATTGA TCGCC TTTTGTTCCTCCACT TERM 1401 1755556 - 1755574 + T 83 -14.6 -3.51976 | overlap 1755552 GCGTTGCCAAGCCTC GCTGGGGT AGC ACCCCAGC TTCGTTTGGCGCCTT TERM 1402 1755590 - 1755600 + T 72 -2.4 -4.72272 | overlap 1755578 1755577 TTCGTTTGGCGCCTT GCGC CTG GCCC TTTTTGATCGCAACG Ajs_1689 1757215 - 1755644 - | phosphonate ABC transporter, inner membrane subunit Ajs_1690 1758039 - 1757206 - | ABC transporter related TERM 1403 1758117 - 1758107 - R 88 -8.2 -4.7373 | overlap 1758108 TGATTTGATCAAAAA CGCC AAT GGCG CACGCGCGGGCTATC TERM 1404 1758145 - 1758160 + r 72 -11.8 -3.33696 | opp_overlap 1758108, overlap 1758148 ATCTGGGCCAGGCCC GCGCGC GCCG GCGCGC TTACTTCAGCAGGCC Ajs_1691 1759051 - 1758161 - | phosphonate ABC transporter, periplasmic phosphonate-binding protein TERM 1405 1759024 - 1759010 - G 74 -12.8 -3.53012 | opp_overlap 1759021 GGCGGCTGCGGCAAA GCGGCG CAG CGCCGC ACGGCGTGCGGTCGT Ajs_1692 1760535 - 1759177 - | major facilitator superfamily transporter Ajs_1693 1761753 - 1760620 - | extracellular ligand-binding receptor TERM 1406 1762822 - 1762788 - H 72 -4 -4.59853 | opp_overlap 1762791 1762804, overlap 1762789 1762791 GGAACTCCTGAAAAA TGAGCGGCCCCCGC TTTCCCC GCGGGCGCCGCGGC CGGATTGTCCTTTGG TERM 1407 1762819 - 1762791 - H 80 -14.5 -3.23975 | opp_overlap 1762791 1762804, overlap 1762789 1762788 ACTCCTGAAAAATGA GCGGCCCCCGC TTTCCCC GCGGGCGCCGC GGCCGGATTGTCCTT TERM 1408 1763304 - 1763277 - g 73 -11.2 -3.72324 | overlap 1763278 CATCCTGATCAACAA CGCCGGCGCG AGCTGGGG CGCGCCGGCC GAGGACCACCCCGTG TERM 1409 1763303 - 1763278 - g 73 -14.7 -2.83073 | overlap 1763277 ATCCTGATCAACAAC GCCGGCGCG AGCTGGGG CGCGCCGGC CGAGGACCACCCCGT Ajs_1695 1762987 - 1763778 + | gluconate 5-dehydrogenase Ajs_1696 1763815 - 1764258 + | hypothetical protein TERM 1410 1764310 - 1764273 - f 72 -4.2 -4.55128 | gap 1, opp_overlap 1764276, overlap 1764274 1764275 1764306 AGTTTTAAATGAAAA GTGGCT-CTAGCGCTTA TGTAT CAAGCGCTAGAAGCTAT TGAAATAATAGCAAA Ajs_1697 1764346 - 1765362 + | alcohol dehydrogenase Ajs_1698 1765359 - 1765823 + | GCN5-related N-acetyltransferase Ajs_1699 1765872 - 1766798 + | putative glutathione S-transferase-related protein Ajs_1700 1766833 - 1767738 + | hypothetical protein Ajs_1701 1768487 - 1767849 - | hypothetical protein Ajs_1702 1768719 - 1769957 + | Bcr/CflA subfamily drug resistance transporter TERM 1411 1770260 - 1770289 + G 73 -12.9 -3.33696 | gap 1, overlap 1770247 GCGCTGGCGTCGGTG GGC-GCCATGCTGG CGG CCAGCATGCCCGCC TTGATTGCCGCGCGG Ajs_1703 1769954 - 1771360 + | major facilitator superfamily transporter Ajs_1704 1772603 - 1771506 - | hypothetical protein Ajs_1705 1773014 - 1772607 - | hypothetical protein Ajs_1706 1774534 - 1773011 - | hypothetical protein TERM 1412 1774323 - 1774355 + g 100 -23.5 -2.78935 | opp_overlap 1774316, overlap 1774328 TTCAAGTAGCAGCGG CGCACCAGCAGGCGC CGC GCGCCTGCTGTTGCG TGTGGTGGAGGCTCT TERM 1413 1774328 - 1774350 + g 100 -19.2 -3.14468 | opp_overlap 1774316, overlap 1774323 GTAGCAGCGGCGCAC CAGCAGGCGC CGC GCGCCTGCTG TTGCGTGTGGTGGAG TERM 1414 1776565 - 1776541 - g 95 -14.9 -4.19238 | GGGCGAACTGGAAAA GCCCGGCCGCG ACC CGCGCCCGGAC TTCAAGGTGGCGCGC Ajs_1707 1774586 - 1776982 + | RNA-binding S1 domain-containing protein Ajs_1708 1777055 - 1777879 + | putative signal transduction protein TERM 1415 1778029 - 1778045 + G 72 -5.7 -4.36903 | overlap 1778030 CGAAGGGACTCATCC TCGGCCC GCT GGACCGG TTTGTCTTTGGTGAA TERM 1416 1778250 - 1778267 + G 81 -4 -5.00884 | GTGAGCGCGCAGTTC GGCCAG AACCTG CAGGCC TTTTTTGGCGGCCGT Ajs_1709 1777908 - 1779053 + | hypothetical protein Ajs_1710 1780535 - 1779084 - | putative PAS/PAC sensor protein Ajs_1711 1781776 - 1780640 - | iron-containing alcohol dehydrogenase Ajs_1712 1781839 - 1782714 + | hydratase/decarboxylase TERM 1417 1783406 - 1783420 + G 77 -5.6 -4.57569 | overlap 1783407 CTGGTGCTGGAACGC GCAGCC ATT GGCTGG TTTTTCGACCAGTAC Ajs_1713 1782731 - 1783720 + | alpha/beta hydrolase domain-containing protein TERM 1418 1784461 - 1784512 + G 71 -12.8 -3.28712 | gap 1, overlap 1784500 GGTGCAGGCGGCACG CGCGCGCGGCGATGCGCAGGTCACG CTG CATGCCCAGTGCAGCGCCGAG-GCG TTCTACCGCCGCGCA Ajs_1714 1783742 - 1784605 + | thioesterase superfamily protein TERM 1419 1784621 - 1784657 + T 100 -13.1 -4.89009 | overlap 1784623 1784623 CGGCTTCTTTATTGA TAGCTGCTAGCGCTTGT CAA ATAAGCGCTAGCGCCTG TTTTTGCTTAAATGT TERM 1420 1784623 - 1784655 + T 90 -13.5 -4.06004 | overlap 1784621 1784623 GCTTCTTTATTGATA GCTGCTAGCGCTTGT CAA ATAAGCGCTAGCGCC TGTTTTTGCTTAAAT TERM 1421 1784623 - 1784654 + T 78 -14.6 -3.02518 | gap 1, overlap 1784623 1784621 GCTTCTTTATTGATA GCTGCTAGCGCTTGT CAA ATAAGCGCTAGC-GC CTGTTTTTGCTTAAA Ajs_1715 1785600 - 1784665 - | glycine cleavage T protein (aminomethyl transferase) Ajs_1716 1785646 - 1786647 + | aminodeoxychorismate lyase Ajs_1717 1786644 - 1787297 + | thymidylate kinase TERM 1422 1787632 - 1787593 - g 79 -12 -3.8512 | gap 1 GATCGAGGACAAGAA GCGCAAGGCC-AGCCGCGA GAT CCGCGTCGAGGCCATGCGC GACGCGGTGGAGTTC Ajs_1718 1787294 - 1788289 + | DNA-directed DNA polymerase TERM 1423 1788383 - 1788365 - g 100 -13.8 -4.49337 | opp_overlap 1788358 1788356 1788365 GAACATCAAGGAAAA GGCCGCGC TGT ACGCGGCC TATATCCCGTTCTTT Ajs_1719 1788306 - 1788665 + | type IV pilus assembly PilZ TERM 1424 1788693 - 1788717 + F 100 -12.9 -5.61881 | GCGGGCCCCGCAGGA TGCCGACCG CGCCCGC CGGTCGGCA TTTTTGTTTTTCGAG TERM 1425 1789333 - 1789317 - g 80 -13.7 -3.63515 | opp_overlap 1789331 CGTCACGTTCAAGAA CGCGCAG GAC CTGCGCG ACGTGGCCGCCTTTG Ajs_1720 1788739 - 1789548 + | TatD family hydrolase TERM 1426 1789881 - 1789837 - g 71 -9.2 -3.84514 | gap 2 ATGCCAAGGACGAAA GCGC-GCTGA-TGATGGCCGCG TTG CGCGGCAATCTGCCCGCTGCGC GCGGCCTGATCGCGC Ajs_1721 1789545 - 1790231 + | ankyrin Ajs_1722 1792139 - 1790355 - | lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA TERM 1427 1792494 - 1792506 + G 78 -6.2 -4.59773 | opp_overlap 1792469 1792468 CCAGGCTGACCTGGA GCGC AGCGG GCGC TTTTTGGGCGTGGAC TERM 1428 1792770 - 1792759 - g 74 -2.2 -4.72272 | TTCGTCTACGAAAAA CTCA CGGG CGAG CGCGGTATCTTCTCC Ajs_1723 1792252 - 1793583 + | TolB domain-containing protein Ajs_1724 1793623 - 1794165 + | TonB box domain-containing protein Ajs_1725 1794165 - 1794950 + | TPR repeat-containing protein Ajs_1726 1794947 - 1795729 + | UBA/THIF-type NAD/FAD binding protein TERM 1429 1795894 - 1795870 - T 81 -10 -4.18644 | opp_overlap 1795870 AGTACACAAAGGAAA CCCTGCTATC TAAAC GGTAGCAGGG TTTTTCTTTTTCTGT TERM 1430 1795870 - 1795894 + T 100 -12.2 -5.71295 | opp_overlap 1795870 AGTACACAAAGGAAA CCCTGCTATC TAAAC GGTAGCAGGG TTTTTCTTTTTCTGT TERM 1431 1795986 - 1795971 - T 100 -7.5 -5.4505 | opp_overlap 1795969 1795971 TCCGGCAAGAAAAAA GCCCC TCGGCG GGGGC TCTTTAGGGACTGAC TERM 1432 1796019 - 1796006 - T 84 -8.1 -4.431 | TAGGGACTGACAAAA CGCGA TGCG TCGCG CGCGCGGGACGTTCC TERM 1433 1796083 - 1796067 - T 95 -11.5 -4.48713 | opp_overlap 1796067 TGCACCAACAAGAAA GCCCCCA CGT CGGGGGC TTGTCTTTGGATGAG TERM 1434 1796067 - 1796083 + T 79 -10.8 -3.84185 | opp_overlap 1796067 TGCACCAACAAGAAA GCCCCC ACGTC GGGGGC TTGTCTTTGGATGAG Ajs_1727 1796374 - 1796105 - | hypothetical protein Ajs_1728 1796789 - 1796361 - | hypothetical protein TERM 1435 1796627 - 1796581 - G 72 -11.5 -3.53811 | gap 1, opp_overlap 1796590 TCGATGGCCTTCAAA GGCGGTA-GAACGCGCTCCAGC AGCA GCCGGGCCGCGCTCATATCGCC ATCCAGCGCCTTAGC Ajs_1729 1797251 - 1796811 - | hypothetical protein Ajs_1730 1797983 - 1797273 - | hypothetical protein Ajs_1731 1798288 - 1797986 - | hypothetical protein Ajs_1732 1798722 - 1798285 - | hypothetical protein TERM 1436 1798598 - 1798626 + g 72 -4.5 -4.4634 | gap 1, overlap 1798593 1798594 AGTTGTTCACCGTAA GCCCCTTGCGTC TTGGTC GGTGCG-GGGGC TTTCTTCTTGGGGTT Ajs_1733 1799542 - 1798805 - | IstB ATP binding domain-containing protein TERM 1437 1799399 - 1799428 + g 77 -13.5 -3.61398 | overlap 1799420 GCTGTCACGCCAGTC CACCTCGCGCTGC ACCA GCAGCGCCAGGCG TTGTTCAAAGGGCAG TERM 1438 1800765 - 1800743 - H 74 -12.7 -3.32402 | gap 1, opp_overlap 1800749, overlap 1800741 1800739 1800744 CCCACATTAAAGAGA GCC-GCCGGG CTTG CCCGGCAGGC CGTTGGTCGGCGGCA Ajs_1735 1800834 - 1802060 + | transposase IS116/IS110/IS902 family protein Ajs_1736 1802712 - 1802098 - | integrase, catalytic region TERM 1439 1802152 - 1802170 + g 70 -11.7 -3.35996 | opp_overlap 1802148 CACATTAATGATGCT GGCCACC CAGTC GGTGGCC TTCTGGCTGGCGGTG Ajs_1737 1803251 - 1803000 - | hypothetical protein Ajs_1738 1803552 - 1803707 + | transposase mutator family protein Ajs_1739 1804682 - 1803720 - | transposase IS116/IS110/IS902 family protein TERM 1440 1805449 - 1805487 + H 74 -12.4 -3.53224 | TTCATCGCCTGCGTC GATGGGCTCAAGGGCTTC CCT GACGCCATTGAGGCCGTC TTTCCCAAGGCGGTG TERM 1441 1806302 - 1806323 + H 100 -10.9 -5.95286 | opp_overlap 1806302 CTACCAAGTTTCAAA GGCTCTGTA GCGA TACAGGGCC TTTTTTGTTTTTGCT Ajs_1741 1806941 - 1807093 + | hypothetical protein Ajs_1742 1808614 - 1807100 - | lytic transglycosylase, catalytic Ajs_1743 1809390 - 1808611 - | hydroxyacylglutathione hydrolase Ajs_1744 1809389 - 1810168 + | methyltransferase type 11 TERM 1442 1810156 - 1810180 + FH 100 -7.8 -6.02919 | gap 1, overlap 1810145 GGTAGCGCGGCGCCA TGGCCCG-GGC TGAG GCGACGGGCCA TTTTTTTATTTCTGG TERM 1443 1810492 - 1810465 - g 95 -9 -5.06414 | CGGCTGGAAGAAAAA GGGCTGGCGCAC GGCG GCCGGCCAGCCC GTGAAGAACGTGGAG Ajs_1745 1810205 - 1810651 + | ribonuclease H Ajs_1746 1811013 - 1810678 - | thioredoxin domain-containing protein Ajs_1747 1812454 - 1811096 - | molybdopterin molybdochelatase TERM 1444 1811266 - 1811296 + g 95 -14.6 -4.16842 | overlap 1811251 CCGCTGCCGTGGTGA CCAGGCCGCGCTGG TAT TCGGTGCGGCCGGG TTTCTTGCGCATGGC TERM 1445 1811880 - 1811895 + g 70 -4 -4.56597 | gap 1, opp_overlap 1811864 GCCACGCGCACCCGG CGGT-AC ACC GTCACCG TTTTTAGGCCCAAAC mobA 1813116 - 1812481 - | molybdopterin-guanine dinucleotide biosynthesis protein A TERM 1446 1812884 - 1812871 - G 71 -9.5 -3.86015 | CAGCCCTGTGAGAAA GCCCG CCAG CGGGC CGGCGTAGTCGGCAA TERM 1447 1813168 - 1813142 - R 75 -15 -2.71263 | opp_overlap 1813164, overlap 1813129 1813130 AAGGGTGGTGAACGA CGCGCCGGGGCG GGT CCCCGCGGCGCG GCGGCGGCTCAGCCG moaA 1814313 - 1813177 - | molybdenum cofactor biosynthesis protein A Ajs_1750 1814445 - 1815302 + | hypothetical protein Ajs_1751 1816768 - 1815689 - | integrase catalytic subunit Ajs_1752 1817950 - 1816871 - | integrase catalytic subunit Ajs_1753 1819138 - 1818155 - | transposase, IS4 family protein Ajs_1754 1819285 - 1820370 + | putative transposase Ajs_1755 1820980 - 1820420 - | hypothetical protein Ajs_1756 1822489 - 1821056 - | aldehyde dehydrogenase TERM 1448 1822538 - 1822578 + r 100 -9.8 -5.1861 | gap 2, overlap 1822542 CTGGGCTACGAGCCG GAATGCCGTCCAGCGCCC AAGGGAC GGGCGCTGG-CAGC-TTC TTTTTTGATAGTGCC TERM 1449 1822542 - 1822575 + r 100 -11.7 -4.68456 | gap 1, overlap 1822538 GCTACGAGCCGGAAT GCCGTCCAGCGCCC AAGGGAC GGGCGCTGG-CAGC TTCTTTTTTGATAGT hppA 1824681 - 1822597 - | membrane-bound proton-translocating pyrophosphatase Ajs_1758 1824891 - 1825451 + | inorganic diphosphatase TERM 1450 1825495 - 1825518 + F 100 -15.2 -5.4505 | opp_overlap 1825446 CCACTGCCTCATCCA GCCCGCCGGC ACAT GCCCGCGGGC TTTTTTCTTGCAGGG Ajs_1759 1825667 - 1826173 + | putative CheW protein TERM 1451 1826200 - 1826217 + T 100 -14.1 -4.72986 | CTGCATCTCTGCCAA GCGCGCC CATG GGCGCGC TTTTTCATGGCCGTG Ajs_1760 1827462 - 1826242 - | hypothetical protein TERM 1452 1828529 - 1828504 - g 90 -3.9 -5.46657 | gap 1 GATTTGAAGAAAAAA CGC-TGCTGATC AAG GTGCAGCAAGCG CAAGCAGCTATTGTT TERM 1453 1829355 - 1829342 - g 71 -9.5 -3.76048 | overlap 1829339 GCTCAACGAATACAA GCGCC GCCA GGCGC CTGTGGGCGTGCGCG Ajs_1761 1827768 - 1829432 + | NAD+ synthetase Ajs_1762 1829500 - 1829838 + | nitrogen regulatory protein P-II Ajs_1763 1830482 - 1829889 - | hypothetical protein Ajs_1764 1830876 - 1830475 - | diacylglycerol kinase TERM 1454 1830750 - 1830760 + g 83 -8.2 -4.63486 | CCAGGCACACCTCCT GGCG AAA CGCC TTTTCTTCCCAGCCT Ajs_1765 1831533 - 1830973 - | RDD domain-containing protein Ajs_1766 1832388 - 1831564 - | putative transmembrane protein TERM 1455 1831844 - 1831882 + g 100 -19.4 -3.9644 | opp_overlap 1831824 CGTACCGTGGTGGCT GCGCCGGTCGGCCGCGGC GCC GCCTTGGCCGCCAGGCGC TTCTTCTCTTCCGCA TERM 1456 1832350 - 1832333 - G 100 -11.3 -4.70583 | CCCAGCAAGACAAAA GCCAGCA AGAA TGCTGGC AGGTGGGGGCGTGGG Ajs_1767 1832863 - 1832402 - | putative transmembrane protein Ajs_1768 1833426 - 1832860 - | RNA polymerase factor sigma-70 TERM 1457 1833026 - 1833004 - G 84 -7 -4.77157 | gap 1, opp_overlap 1833003 1833004 GTAACGCATCAAAAA TGCCTCCCG TTGACG CGGG-GGCA GTTCTTGGATCTCGG TERM 1458 1833199 - 1833189 - G 79 -2.4 -5.02074 | TCAGGCTGGAAAAAA GCGC ATT GCGT GTCTTCTGTCGCCGG Ajs_1769 1833713 - 1835509 + | acetolactate synthase 3 catalytic subunit ilvH 1835650 - 1836141 + | acetolactate synthase 3 regulatory subunit Ajs_1771 1836199 - 1837215 + | ketol-acid reductoisomerase TERM 1459 1837217 - 1837246 + F 74 -12.1 -3.53012 | gap 1, opp_overlap 1837205 1837216, overlap 1837218 AGACGCGCAACTGAT G-CGTGAGCGCGGC CGG GCCGCGCTGGCGTC TTTCCCCAAGGCCAC TERM 1460 1837218 - 1837244 + F 84 -15.8 -3.34398 | opp_overlap 1837205 1837216, overlap 1837217 GACGCGCAACTGATG CGTGAGCGCGGC CGG GCCGCGCTGGCG TCTTTCCCCAAGGCC TERM 1461 1837256 - 1837271 + F 100 -10.4 -5.08824 | GGCGTCTTTCCCCAA GGCCAC CCCG GTGGCC TTTTTTGCGTGCGGG Ajs_1772 1837391 - 1838224 + | CDP-diacylglycerol--serine O-phosphatidyltransferase TERM 1462 1838350 - 1838376 + F 100 -10.1 -5.61881 | gap 1 CACACCTACTTCCCA CGGCCCGTGAGC ACCA GCG-ACGGGCCG TTTTTGTTTTTCCGG Ajs_1773 1838447 - 1840120 + | 2-isopropylmalate synthase Ajs_1774 1840156 - 1841694 + | 2-isopropylmalate synthase TERM 1463 1841721 - 1841766 + F 100 -16.4 -4.4009 | opp_overlap 1841728 1841730, overlap 1841730 ATAATTCAGGCACTT TCTAAAAGAGTCGCGCAAGG CATTGA TCTTGCGCGACTTTTTTTGA TTTTGTACACTGCCA TERM 1464 1841759 - 1841728 - f 78 -10.2 -4.09864 | opp_overlap 1841721 1841730, overlap 1841730 AGGCACTTTCTAAAA GAGTCGCGCAAG GCATTGAT CTTGCGCGACTT TTTTTGATTTTGTAC TERM 1465 1841757 - 1841730 - f 77 -12.8 -3.64716 | opp_overlap 1841721 1841730, overlap 1841728 GCACTTTCTAAAAGA GTCGCGCAAG GCATTGAT CTTGCGCGAC TTTTTTTGATTTTGT TERM 1466 1841730 - 1841757 + F 100 -13.5 -5.81622 | opp_overlap 1841730 1841728, overlap 1841721 GCACTTTCTAAAAGA GTCGCGCAAGG CATTGA TCTTGCGCGAC TTTTTTTGATTTTGT TERM 1467 1841948 - 1841932 - g 95 -5 -5.40072 | overlap 1841933 GCGGTGGCAAAAAAA GCCGCG TCCAC CGCGGT TGCCAAACGCACCCC Ajs_1775 1841809 - 1842891 + | murein-DD-endopeptidase Ajs_1776 1843775 - 1842963 - | IclR family transcriptional regulator TERM 1468 1843975 - 1843935 - R 90 -8.2 -4.84359 | gap 1, overlap 1843911 1843936 GCAGGTTGATAAAAA CTTGCGGCCTAGCC-ACCC CAAT GGGTAGGCCAGGCCGGGAC CGGATCTTCAACTGC TERM 1469 1843974 - 1843936 - R 74 -11.7 -3.50133 | gap 1, overlap 1843911 1843935 CAGGTTGATAAAAAC TTGCGGCCTAGCC-ACCC CAAT GGGTAGGCCAGGCCGGGA CCGGATCTTCAACTG Ajs_1777 1845285 - 1844011 - | acyl-CoA dehydrogenase domain-containing protein TERM 1470 1844625 - 1844669 + g 89 -11.3 -4.1711 | opp_overlap 1844611 ACACGTTGAGTGCAC GCACCACCGTGATGCCTGGCG TAT CGGCAGGCACCACGATCATGC TTTGTTGCGAGTGCT Ajs_1778 1846402 - 1845317 - | aminoglycoside phosphotransferase TERM 1471 1846097 - 1846061 - G 77 -7.2 -4.57353 | gap 1, opp_overlap 1846094, overlap 1846062 TTCCATCAGATAAAA CGCGC-GCCCGATGACG GACT CGTCCTCGCACAGCGCA ATCATGCGCGGCACG Ajs_1779 1847246 - 1846527 - | Crp/FNR family transcriptional regulator TERM 1472 1847201 - 1847190 - G 70 -2.2 -4.70169 | overlap 1847193 GGAGAGGGAAGAAAA CCAG CGAC CTGA GTTGATCGCCTCGCG TERM 1473 1847432 - 1847400 - R 100 -18.5 -3.59946 | opp_overlap 1847428 GTTTGAATGAGACAA GCCGCTGGCGCTTGA CCG TCAAGCGCTAGCAGC TATAAAAATAGTAGC Ajs_1780 1848216 - 1847449 - | enoyl-CoA hydratase/isomerase Ajs_1781 1849759 - 1848239 - | 3-hydroxybutyryl-CoA dehydrogenase TERM 1474 1851129 - 1851152 + G 73 -3.8 -4.62783 | opp_overlap 1851146 CAGCCCGAGTCGCTG TTCGATCTGC AACA GCAGGCTGAA TTTTTCACCTCGGTG Ajs_1782 1849836 - 1851902 + | hypothetical protein Ajs_1783 1852862 - 1851933 - | thiamine-phosphate pyrophosphorylase TERM 1475 1852432 - 1852453 + g 72 -8.7 -4.07687 | GCGCGTACCTCGCGT GTGATGGCC GCAG GGTCGTCAC TTTTGAAGCGCAGCT TERM 1476 1852923 - 1852889 - R 72 -12.1 -3.28712 | gap 1, opp_overlap 1852891 1852921 CGCGTGGTGCCAGAA CGGCG-TGCCCAGCAC GGGC GTGCTGGGTTGCGCCG CCTCCTGCGGTGTCA thiG 1853677 - 1852865 - | thiazole synthase Ajs_1785 1853886 - 1853689 - | thiamine biosynthesis protein ThiS Ajs_1786 1855007 - 1853883 - | FAD dependent oxidoreductase TERM 1477 1855071 - 1855052 - H 76 -5.6 -4.64076 | gap 1, opp_overlap 1855052 1855061, overlap 1855053 1855054 AACCAAAGGACAAAA CGGGAGCGC GCG GCGCGCC-G ATGCTGTTGAAACTC TERM 1478 1855208 - 1855224 + H 70 -10.1 -3.65046 | opp_overlap 1855208 1855210 GCCGGCATTACAGCA CAGGGGT GGT GCCCCTG TTGTTGACGTGGCGC Ajs_1787 1855225 - 1856151 + | phosphomethylpyrimidine kinase Ajs_1788 1856695 - 1856219 - | SH3 type 3 domain-containing protein TERM 1479 1856935 - 1856910 - R 71 -13.2 -3.01712 | overlap 1856883 GCTCCTGCTTCAATA GCGCCCGGCG CATTGC CGCAGGGCGC GCCGCGCCGTCGCCG Ajs_1789 1858019 - 1856955 - | FAD-dependent pyridine nucleotide-disulphide oxidoreductase Ajs_1790 1858368 - 1858045 - | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein Ajs_1791 1859859 - 1858471 - | sulfate adenylyltransferase subunit 1 Ajs_1792 1860791 - 1859859 - | sulfate adenylyltransferase subunit 2 TERM 1480 1860813 - 1860844 + r 70 -11.6 -3.20218 | gap 1, opp_overlap 1860810, overlap 1860811 1860809 TTCCAGTCAAATCTG GCT-CCAGCGCTTGT GGG GCAAGCGCAGGCAGC TATCGTTTTTAGTGG Ajs_1793 1861494 - 1860853 - | phosphoadenylylsulfate reductase (thioredoxin) Ajs_1794 1861886 - 1861491 - | hypothetical protein Ajs_1795 1863699 - 1861912 - | nitrite/sulfite reductase hemoprotein beta subunit TERM 1481 1863777 - 1863801 + r 84 -4.3 -5.2189 | opp_overlap 1863779, overlap 1863765 1863779 ATGGGCGCACTTTAA AAGTCTGTCTT ATA AAGACAAACTA TTTTTTAATGCTTCA TERM 1482 1863799 - 1863779 - R 79 -9.1 -4.13767 | opp_overlap 1863765 1863777 1863779 GGGCGCACTTTAAAA GTCTGTCTT ATA AAGACAAAC TATTTTTTAATGCTT Ajs_1796 1865772 - 1863853 - | hypothetical protein Ajs_1797 1866473 - 1865808 - | hypothetical protein TERM 1483 1866572 - 1866530 - R 74 -12.7 -3.29511 | gap 1, opp_overlap 1866563, overlap 1866531 CGCAGTGGGCTACAA CGGCAA-CGCCCCCGCCACA GTGA TGCGACGGGGGCGACTGCAA AGAGGCGCTGCTTTG TERM 1484 1866571 - 1866531 - R 71 -14 -2.57564 | gap 1, opp_overlap 1866563, overlap 1866530 GCAGTGGGCTACAAC GGCAA-CGCCCCCGCCACA GTGA TGCGACGGGGGCGACTGCA AAGAGGCGCTGCTTT Ajs_1798 1867154 - 1866882 - | hypothetical protein Ajs_1799 1867242 - 1868312 + | sulfate ABC transporter, periplasmic sulfate-binding protein Ajs_1800 1868514 - 1869212 + | glutathione S-transferase domain-containing protein TERM 1485 1870649 - 1870691 + G 79 -3.3 -5.02074 | gap 1, overlap 1870650 ATCCACTGCCGGTGG TGG-ACCACGCCAGCGCACG GGAG CGTACCCTGATGCGGTTCCA TTTTTTGGGGCGTGG Ajs_1801 1869256 - 1870722 + | deoxyribodipyrimidine photo-lyase type I TERM 1486 1870963 - 1870936 - f 81 -9.8 -4.21812 | opp_overlap 1870936 CGCCAGTCAAAAGAA GGGTTAGCAGGT ACTC ACCGGCTAGCCC TTTTTCTTTGCGGCC TERM 1487 1870936 - 1870963 + F 100 -12 -5.27335 | opp_overlap 1870936 CGCCAGTCAAAAGAA GGGTTAGCAGGT ACTC ACCGGCTAGCCC TTTTTCTTTGCGGCC TERM 1488 1871380 - 1871368 - g 89 -10.5 -4.56597 | CGTTCCTGGCAAAAA CCGCG AGA CGCGG GCGCATGGCTTGCAG TERM 1489 1872118 - 1872098 - g 72 -5.4 -4.33417 | CCCATCGACAAGAAA GCAGGCAA AGAGG CTGCCTAC TGGATACCGTTGATC Ajs_1802 1871054 - 1872670 + | phage integrase family protein TERM 1490 1873399 - 1873385 - g 81 -5.7 -4.77036 | overlap 1873388 GCCCAGCAGGAAAAA TGACG ATGAG CGTCA TTGCGGCAGTGGCCG Ajs_1803 1873051 - 1873632 + | resolvase domain-containing protein Ajs_1804 1874137 - 1874916 + | hypothetical protein Ajs_1805 1876163 - 1875801 - | hypothetical protein TERM 1491 1876642 - 1876626 - H 73 -6.5 -4.25231 | overlap 1876628 AATAAAATCAAACAA CACCGCG CTT CACGGTA GGTAAGAATCACGCC TERM 1492 1876912 - 1876883 - g 100 -10 -4.8622 | gap 1, opp_overlap 1876881 1876901 CCCTCCAAGGAAAAA GCGCAG-GTGGTC TTTGG GGCCACGCTGCGC GGCTTTCGTGAGGCT Ajs_1806 1876844 - 1877104 + | XRE family transcriptional regulator Ajs_1807 1877930 - 1877112 - | hypothetical protein TERM 1493 1877707 - 1877697 - G 90 -2.4 -5.45802 | overlap 1877699 TCGCCAAAAGAAAAA CCGC ACC GCGT ACCCAGCCAAGGCCA TERM 1494 1878004 - 1878031 + r 100 -15 -4.86621 | CGCCAGTCGTTCCAA GGGTTAGCAGGT ACTC ATCTGCTAACCC TTTTTCGTTGCGGCT TERM 1495 1878638 - 1878607 - R 91 -12.4 -4.29738 | gap 1, opp_overlap 1878610 1878611, overlap 1878611 1878614 GCACAGTGACCAAAA CGAAC-AACGGGCCT TGC AGGCCCGTTGGTTCT TCAAGCAAGGGCGGT TERM 1496 1878610 - 1878634 + r 85 -14.3 -3.61398 | opp_overlap 1878607 1878611 1878614, overlap 1878611 CAGTGACCAAAACGA ACAACGGGCCT TGC AGGCCCGTTGG TTCTTCAAGCAAGGG TERM 1497 1878611 - 1878633 + r 86 -17.8 -2.76696 | opp_overlap 1878607 1878611 1878614, overlap 1878610 AGTGACCAAAACGAA CAACGGGCCT TGC AGGCCCGTTG GTTCTTCAAGCAAGG TERM 1498 1878633 - 1878611 - R 100 -17.8 -3.72073 | opp_overlap 1878611 1878610, overlap 1878607 1878614 AGTGACCAAAACGAA CAACGGGCCT TGC AGGCCCGTTG GTTCTTCAAGCAAGG TERM 1499 1878630 - 1878614 - R 90 -13.7 -3.98107 | opp_overlap 1878611 1878610, overlap 1878611 1878607 GACCAAAACGAACAA CGGGCCT TGC AGGCCCG TTGGTTCTTCAAGCA Ajs_1809 1879488 - 1878688 - | enoyl-[acyl-carrier-protein] reductase [NADH] TERM 1500 1880600 - 1880634 + G 75 -5 -4.59027 | gap 1 GCGAGAGGCCCTGGG GCTGGC-GTTCGACT TTGAGT GGATGAACCGCCAGC TTTTCTATGGTGCTT TERM 1501 1880835 - 1880819 - g 75 -13.7 -3.28924 | CACGCTGCGCGACAA CCTGCGC CGC GCGCAGG CGCTGCTCCAGGAGG Ajs_1810 1879578 - 1881452 + | extracellular solute-binding protein Ajs_1811 1881460 - 1882497 + | binding-protein-dependent transport systems inner membrane component Ajs_1812 1882501 - 1883598 + | binding-protein-dependent transport systems inner membrane component Ajs_1813 1883620 - 1885257 + | ABC transporter related Ajs_1814 1885585 - 1886751 + | putative lipoprotein TERM 1502 1886761 - 1886819 + F 100 -22.6 -2.57647 | opp_overlap 1886778, overlap 1886778 CCCTGACGCCCACCA CGCGTTCCTAGAATGAAGGGCGCCAGTC CGC GACTGGCGCCCTTTTTTGTACGAACGCC CTTCCTGTCATGCCT TERM 1503 1886778 - 1886802 + F 100 -21.5 -5.24129 | opp_overlap 1886778, overlap 1886761 CGTTCCTAGAATGAA GGGCGCCAGTC CGC GACTGGCGCCC TTTTTTGTACGAACG TERM 1504 1886802 - 1886778 - f 100 -21.5 -3.44146 | opp_overlap 1886778 1886761 CGTTCCTAGAATGAA GGGCGCCAGTC CGC GACTGGCGCCC TTTTTTGTACGAACG Ajs_1815 1886829 - 1887656 + | hydroxypyruvate isomerase TERM 1505 1887742 - 1887732 - T 72 -2.4 -4.72272 | overlap 1887733 1887734 CGTTGCGATCAAAAA GGGC CAG GCGC AAGGCGCCAAACGAA TERM 1506 1887776 - 1887758 - T 83 -14.6 -3.51976 | overlap 1887754 AAGGCGCCAAACGAA GCTGGGGT GCT ACCCCAGC GAGGCTTGGCAACGC TERM 1507 1888020 - 1887986 - T 88 -4.4 -5.37043 | opp_overlap 1887988, overlap 1887987 1887988 AGTTCAGATAAAAAA GGCCTGC-AGCGCTTA TGCAG TAAGCGCTAGCAG-CT ATTGAATCGATAGTG Ajs_1816 1888908 - 1888042 - | UspA domain-containing protein Ajs_1817 1889989 - 1889057 - | LysR family transcriptional regulator Ajs_1818 1890086 - 1891438 + | hypothetical protein Ajs_1819 1891448 - 1891810 + | hypothetical protein TERM 1508 1891794 - 1891825 + F 75 -4.4 -4.72272 | gap 2, opp_overlap 1891792, overlap 1891793 1891794 CGCTTGTACATCACC TG--GCCGGAGCGC ATTGAC GCGCGCCGGCGGCA TTTTTCATCACCACA Ajs_1820 1891855 - 1892841 + | hypothetical protein Ajs_1821 1894055 - 1892910 - | hypothetical protein TERM 1509 1894832 - 1894817 - g 89 -5.4 -5.18726 | gap 1 TGCCGACAAGAAAAA GCGCATC CTG GA-GCGC CTGACGGCCGCCGAA TERM 1510 1895043 - 1895023 - g 70 -13.3 -3.01791 | ACGTGCTGGTCAACA CCCTGGGCA AGA TGCCCAAGG ACCTGTTCGCCGAGT TERM 1511 1895356 - 1895338 - g 74 -12.4 -3.53012 | TGGCCCTGTCCGAAA CCCGTGGC TAC ACCACGGG CGGTACGGTGCACCT TERM 1512 1896869 - 1896887 + G 72 -13.2 -3.14132 | opp_overlap 1896865 1896872, overlap 1896872 CCAGGACGAACCGCA GAACCAGG GCG CCTGGTTC TTCATCCAGCACAAC kgd 1894185 - 1897061 + | alpha-ketoglutarate decarboxylase TERM 1513 1897205 - 1897188 - g 73 -9.1 -3.96068 | gap 1 GCAGTGGAAGAAGAA GCC-CGGC GAG GCCGTGGC AATCGATGAAATCCT Ajs_1823 1897111 - 1898376 + | 2-oxoglutarate dehydrogenase E2 component TERM 1514 1898432 - 1898405 - f 85 -10.5 -4.3586 | opp_overlap 1898405 CGACGCATACGAAAA CCCACCCCCGG CCCGGT CCAGCGGTGGG TTTTTTCTCATCACC TERM 1515 1898405 - 1898432 + F 100 -8.3 -5.31275 | opp_overlap 1898405 CGACGCATACGAAAA CCCACCCCCGG CCCGGT CCAGCGGTGGG TTTTTTCTCATCACC TERM 1516 1898916 - 1898893 - g 74 -7.4 -4.183 | gap 1, overlap 1898909 GCAAGGCCGAAGAAA CGCTGACC-GC CAA GCAGGTCATCG TGGCCACCGGATCCA Ajs_1824 1898466 - 1899893 + | dihydrolipoamide dehydrogenase TERM 1517 1899907 - 1899949 + F 100 -22.2 -4.58395 | opp_overlap 1899910 1899912, overlap 1899910 1899912 GATAATTTGAGGCAA AAATGGCTGCCAGCGCTTGT GTG GCAAGCGCTGGCAGCTATTG TTTTTGAAGCATAGG TERM 1518 1899910 - 1899946 + F 100 -23.9 -4.40963 | opp_overlap 1899910 1899912, overlap 1899907 1899912 AATTTGAGGCAAAAA TGGCTGCCAGCGCTTGT GTG GCAAGCGCTGGCAGCTA TTGTTTTTGAAGCAT TERM 1519 1899946 - 1899910 - f 100 -21 -4.67011 | opp_overlap 1899910 1899907 1899912, overlap 1899912 AATTTGAGGCAAAAA TGGCTGCCAGCGCTTG TGTGG CAAGCGCTGGCAGCTA TTGTTTTTGAAGCAT TERM 1520 1899912 - 1899944 + F 100 -24.3 -3.80746 | opp_overlap 1899910 1899912, overlap 1899910 1899907 TTTGAGGCAAAAATG GCTGCCAGCGCTTGT GTG GCAAGCGCTGGCAGC TATTGTTTTTGAAGC TERM 1521 1899944 - 1899912 - f 100 -23.6 -2.63208 | opp_overlap 1899912 1899910 1899907, overlap 1899910 TTTGAGGCAAAAATG GCTGCCAGCGCTTG TGTGG CAAGCGCTGGCAGC TATTGTTTTTGAAGC Ajs_1825 1899971 - 1901074 + | AFG1 family ATPase TERM 1522 1901741 - 1901689 - g 100 -22 -3.15544 | gap 1, opp_overlap 1901717 CTTGAGCGCCAGCAA GCCGAGGCGGCCGGCCGCAAT-CCG CCGA CGGCATTGCCGCCGCCGGCCCCGGC CGCGAGCAGCGACCG Ajs_1826 1901074 - 1901760 + | hypothetical protein Ajs_1827 1902623 - 1901820 - | protein phosphatase 2C domain-containing protein Ajs_1828 1902794 - 1904860 + | helicase c2 Ajs_1829 1905725 - 1904823 - | putative transmembrane protein TERM 1523 1907923 - 1907908 - g 79 -3.2 -5.07486 | opp_overlap 1907919, overlap 1907919 CATGGGCAAGAAAAA GGCC GAGGAAAT GGCC GAGCACCGTGCCATC Ajs_1830 1905731 - 1909294 + | DNA polymerase III, alpha subunit TERM 1524 1909362 - 1909319 - f 100 -10.9 -5.0133 | gap 1, opp_overlap 1909326, overlap 1909321 CAGCGCTTGAAAAAA GCCCGCGCGGCACCATGTGC GGTCT GCTCA-GGTGCCGCATCGGC CTCGCTAGAATGAAA Ajs_1831 1909333 - 1909740 + | ATP-dependent Clp protease adaptor protein ClpS TERM 1525 1910841 - 1910816 - g 78 -10.3 -4.09685 | overlap 1910798 CGGCATCTTCGAAAA GGACGCGGCGC TGTC GCGGCGCTTCC AGAAGGTGGACGTGG Ajs_1832 1909800 - 1912148 + | ATP-dependent Clp protease, ATP-binding subunit clpA TERM 1526 1912194 - 1912175 - f 100 -15 -4.15044 | opp_overlap 1912175 CCGCGTTTTAACAAA CCCGCAGC CCGC GCTGCGGG TTTTTTTATGGGCGC TERM 1527 1912175 - 1912194 + F 100 -15 -5.60993 | opp_overlap 1912175 CCGCGTTTTAACAAA CCCGCAGC CCGC GCTGCGGG TTTTTTTATGGGCGC TERM 1528 1912243 - 1912231 - f 100 -10.5 -4.71426 | TGCTTATGAACAAAA GCGCC TCC GGCGC CCAACCACCAAGCGA TERM 1529 1912370 - 1912381 + F 73 -3 -4.74518 | opp_overlap 1912366, overlap 1912366 TTTATTGATAAGATA GTAA TAAA TTAC TTTCTTTTGGTGATT Ajs_1833 1912399 - 1913007 + | TetR family transcriptional regulator Ajs_1834 1913004 - 1914155 + | RND family efflux transporter MFP subunit TERM 1530 1915037 - 1915047 + G 77 -6.8 -4.50976 | overlap 1915023 GCGCTGGTCAGTGCG GCCA TCG TGGC TTTTCTCATCTACAC Ajs_1835 1914152 - 1915351 + | hypothetical protein Ajs_1836 1915362 - 1916072 + | ABC transporter related Ajs_1837 1917589 - 1916165 - | lytic murein transglycosylase TERM 1531 1919031 - 1919008 - g 78 -16 -3.21416 | GAGGCCGATGACGAA CGCACCGAGG CCAT CCTCGGCGCG GTGTACGACTACGCC sbcB 1917634 - 1919073 + | exonuclease I Ajs_1839 1919082 - 1919966 + | silent information regulator protein Sir2 Ajs_1840 1920037 - 1922040 + | Fis family GAF modulated sigma54 specific transcriptional regulator TERM 1532 1922031 - 1922051 + T 73 -11.2 -3.63895 | GCGCGCGCAGTCGTG TCGCTCCT GAAAA AGGAGCGA TTTGCGCTGGTTGGG TERM 1533 1922115 - 1922098 - T 76 -5.5 -4.63184 | gap 1 AATTGACCTGAAAAA CGCCGCCG ATA CAGCG-CG AGCAGCTATTAAATA Ajs_1841 1922643 - 1922296 - | hypothetical protein Ajs_1842 1925678 - 1922640 - | transposase Tn3 family protein Ajs_1844 1927159 - 1926335 - | integrase catalytic subunit Ajs_1845 1927485 - 1927207 - | transposase IS3/IS911 family protein Ajs_1846 1927593 - 1927952 + | hypothetical protein TERM 1534 1927934 - 1927970 + F 88 -4.2 -5.2853 | CCCTGACCGCCCTCA GTGGTCCGTCCTCGCC TGATC GGCGGGGGCATCTCAC TTTTCTTTTTCAGTC Ajs_1847 1928110 - 1929465 + | outer membrane efflux protein TERM 1535 1929959 - 1929948 - g 72 -4.4 -4.56597 | TTTGCCGCTGAAAAA GACA GTCT TGTC AGCCGGGAGATCGTT TERM 1536 1930713 - 1930729 + G 73 -6.5 -4.37092 | GCCTTTGACGCCTCC GCTACAG GCA CTGTCGC TTTTGTAGGAGCGCT Ajs_1848 1929468 - 1931084 + | RND family efflux transporter MFP subunit TERM 1537 1932408 - 1932422 + G 73 -4.2 -4.62069 | overlap 1932400 CTGACGCGGGCTGAG CGCTTC CAT GAGGTG TTTTTGGCATCCCAG TERM 1538 1933051 - 1933030 - g 71 -2.9 -4.62471 | overlap 1933031 1933032 CCGAACCTCGAAAAA CCCGCGA CGAACTAC TCGCGGC GATTCAGGAAGTCAT TERM 1539 1933769 - 1933779 + G 76 -2.4 -4.93898 | CGTCGTGCCGGTGTC CCTG CTG CTGG TTTTTGTGCTGCTAT Ajs_1849 1931100 - 1934288 + | CzcA family heavy metal efflux protein TERM 1540 1934315 - 1934325 + F 73 -6.8 -4.36914 | opp_overlap 1934296 1934295, overlap 1934296 CCGCTCGCTGATCGC GGGA CCT TCCC TTTTCTCCAACCCCA Ajs_1850 1934352 - 1934732 + | hypothetical protein Ajs_1851 1935721 - 1935233 - | MerR family transcriptional regulator TERM 1541 1935340 - 1935350 + g 75 -6.8 -4.36914 | overlap 1935334 AGCGTGAGCGTAGCT GCAG CAA CTGC TTTTCTAGCGCCCGC TERM 1542 1935583 - 1935593 + g 75 -6.8 -4.30576 | overlap 1935569 GCGGGGGTTCGGGCA GCAG CCC CTGC TTTTCGTAGTAACGG TERM 1543 1937194 - 1937225 + G 72 -14.4 -3.05384 | TCCTGATCCCCGGTC CGCGGCGTGTGC AGGACTGG GCGCGCGCCGCG TTCGCTGCGACCGAA TERM 1544 1937506 - 1937472 - g 70 -10.6 -3.57263 | overlap 1937499 ATCGCCATCCCCAAA CAGCGCGCCTACGCCC AGC AGATGCAAGCGCGCCG GCCCGCGAAGTCGAA Ajs_1853 1936716 - 1939004 + | transposase Tn3 family protein Ajs_1854 1939867 - 1939130 - | IstB ATP binding domain-containing protein TERM 1545 1939724 - 1939753 + g 77 -13.5 -3.61398 | overlap 1939745 GCTGTCACGCCAGTC CACCTCGCGCTGC ACCA GCAGCGCCAGGCG TTGTTCAAAGGGCAG Ajs_1855 1941427 - 1939904 - | integrase catalytic subunit TERM 1546 1940867 - 1940885 + g 70 -11.7 -3.35996 | opp_overlap 1940863 CGCGCTAATGATGCT GGCCACC CAGTC GGTGGCC TTCTGGCTGGCGGTG TERM 1547 1941814 - 1941850 + r 76 -10.2 -3.85698 | gap 1 GCTGATCGCCTCCAT TCGCATGGGCAAGATCG GCGC CGATCTCGCAC-TGCGA TTTCTCGGCAGCGCG TERM 1548 1942822 - 1942804 - R 78 -14.6 -3.05384 | opp_overlap 1942800 1942800, overlap 1942786 GTCGCGGGCATCCAA GGGATGGC AGC GCCATCCC GTTCCGGTTTCAACC Ajs_1857 1943149 - 1942832 - | hypothetical protein TERM 1549 1943316 - 1943283 - R 72 -12.3 -3.31144 | opp_overlap 1943283 1943284, overlap 1943263 1943284 TGCGTATCCGCAGAA CCGGCCGATCCGCGC GTTA GCGCGGGCCGACCAA TTCTGGGCTCCGGTC TERM 1550 1943315 - 1943284 - R 71 -13.6 -2.58544 | opp_overlap 1943283 1943284, overlap 1943283 GCGTATCCGCAGAAC CGGCCGATCCGCGC GTTA GCGCGGGCCGACCA ATTCTGGGCTCCGGT Ajs_1858 1944963 - 1943299 - | phosphatidylethanolamine:Kdo2-lipid A phosphoethanolamine transferase Ajs_1859 1945509 - 1945078 - | phage transcriptional regulator, AlpA TERM 1551 1946905 - 1946877 - g 85 -7.4 -4.75309 | GGAAACTGAAGAAAA GTTCGAGCAGGC GCGGA GCATGTTCGAAC AGTCGCGCGCGGACC Ajs_1860 1945732 - 1946943 + | hypothetical protein Ajs_1861 1946960 - 1947619 + | hypothetical protein Ajs_1862 1947628 - 1948608 + | hypothetical protein Ajs_1863 1948687 - 1949772 + | putative transposase Ajs_1864 1949775 - 1950590 + | hypothetical protein TERM 1552 1950964 - 1950978 + G 77 -7 -4.45544 | overlap 1950966 GTTTCTTTCGGCCAC GGGCCG ACC CGGCAC TTTTGCTTGGTGGCG Ajs_1865 1950627 - 1951790 + | patatin Ajs_1866 1951883 - 1952227 + | putative sigma E regulatory protein, MucB/RseB Ajs_1867 1953434 - 1952208 - | transposase, IS204/IS1001/IS1096/IS1165 family protein TERM 1553 1952315 - 1952331 + g 73 -13.7 -3.13164 | GCGCGCGACGCTTGG CGGCCTG GAA CAGGCCG TTGAGTGCTTCGAGG TERM 1554 1953498 - 1953441 - R 71 -13.7 -2.5655 | gap 3, overlap 1953440 GTCATGCATACCAAT CGCTCCTGCTCGTCATGGCCGATGCG TGAGCATGC CGCATCGGCCATGACG-GCC--AGCG TACGGGCCGGCAGCC TERM 1555 1954480 - 1954457 - R 74 -12.5 -3.34398 | overlap 1954455 CTCTCGGGCGAAATA CATCTCGCC ACGCGG GGCGAGATG CGGTTCACCGACGGA Ajs_1869 1955650 - 1955051 - | membrane protein-like protein TERM 1556 1955582 - 1955569 - G 70 -3.7 -4.56914 | opp_overlap 1955569 CGAGGTAAACCAAAA GCGGG CGCA CCAGC TTCTCTGCCCACGAC Ajs_1871 1957051 - 1955963 - | transposase, IS4 family protein Ajs_1872 1957610 - 1957134 - | hypothetical protein TERM 1557 1957462 - 1957452 - G 83 -3.2 -5.15634 | CAGTTGATCAAAAAA TCCC ATG AGGA CACTCCTTGCAAACG Ajs_1873 1958301 - 1957630 - | PAP2 (acid phosphatase) superfamily protein-like protein Ajs_1874 1958491 - 1959570 + | integrase catalytic subunit TERM 1558 1959687 - 1959672 - g 70 -6.1 -4.183 | TGAATTCTGAAGAAA CCGAG CTAGAT CTCGG CAAAGCGGCTGATGC TERM 1559 1959720 - 1959692 - g 70 -11 -3.55071 | gap 1 CTAGATCTCGGCAAA GCGGCTGATGCCG TCGT CGGCGTCA-CCGC CGATGATGACGGTGA TERM 1560 1959840 - 1959857 + G 75 -2.7 -4.83169 | gap 1, overlap 1959841 GCTTCGCCAATATCG TCG-CTTC GGA GAAGACGG TTTTTCTCGCGACAT Ajs_1875 1959656 - 1960156 + | hypothetical protein TERM 1561 1960314 - 1960277 - g 79 -3.9 -4.91712 | gap 1, overlap 1960278 CTCAACTTAGAAAAA TCGGCCAGCGTCCTGCGC CTC GCGCTCGACAA-GGCCGG CGTGGTCGCAAACGT Ajs_1876 1960193 - 1961035 + | hypothetical protein Ajs_1877 1961442 - 1962671 + | transposase Tn3 TERM 1562 1962697 - 1962685 - T 71 -6.2 -4.34789 | overlap 1962695 GAAGGCAGAAAAGAA GGCC GAGAA GGCC GTACCTGCGAAGGCG Ajs_1878 1965386 - 1962744 - | heavy metal translocating P-type ATPase Ajs_1879 1965565 - 1966851 + | sodium/calcium exchanger membrane region TERM 1563 1967191 - 1967211 + T 77 -14 -3.28001 | overlap 1967187 TACGCAGCACTTGAG CGAGGCGG CGAGT CCGCCTCG TTGCGTTTCAGGATG Ajs_1880 1967623 - 1967219 - | hypothetical protein TERM 1564 1967861 - 1967808 - H 73 -3.2 -4.74801 | gap 3, opp_overlap 1967832, overlap 1967818 CAAGGCCAGGAAAAA GCCCA-C-CAAAGCAGCCGCATAGCGC CCG GCAC-ATCCGGATGCTTCGAGCTTGGC AATGGCACGGGTACT TERM 1565 1968512 - 1968476 - g 72 -14.4 -3.01924 | gap 2 CAGCCTGCTCGAACA CTCGGCGGCGGAACGCGC GCA GCGCG-CCCGC-GCCGTG ATGGATGCGATCGAG TERM 1566 1969098 - 1969127 + G 72 -13.6 -3.18582 | gap 1 TGGATCGGCCCGGCG CGGCCGC-GCTCG TCGCC CGAGTGGCGGCCG TTCATCGGTGGACTG Ajs_1882 1968234 - 1969934 + | phage integrase family protein Ajs_1883 1970276 - 1969947 - | XRE family transcriptional regulator Ajs_1884 1970656 - 1970273 - | hypothetical protein TERM 1567 1970814 - 1970830 + r 77 -2.3 -5.00616 | AGATATTCACAAGTG GTTGTTT TTG AAAGAAC TTTTTTCGCGAAGCG TERM 1568 1971170 - 1971158 - R 86 -7.7 -4.77036 | CCCCATCACTAAAAA TGGCT TCA AGCCA CCGACTCGATTGCAT Ajs_1886 1972698 - 1971445 - | phage integrase family protein TERM 1569 1971856 - 1971872 + g 72 -5 -4.46581 | opp_overlap 1971851, overlap 1971852 CACTAACTCATCGGT CGCCGG AATCG CCCGCG TTTTGTCCCCTTTTC Ajs_1887 1972732 - 1973739 + | hypothetical protein Ajs_1888 1974203 - 1973823 - | hypothetical protein Ajs_1889 1975256 - 1974225 - | alcohol dehydrogenase TERM 1570 1975312 - 1975342 + r 83 -16.1 -2.91681 | GCCCCCGTGCACCAG CCGCCCCCGCTGG GACGG CCAGTGGGGGCGC TGTATGGGCTTAGAA Ajs_1890 1976875 - 1975352 - | aldehyde dehydrogenase Ajs_1891 1978880 - 1977165 - | Na+/Pi-cotransporter TERM 1571 1977467 - 1977451 - G 90 -2.9 -5.40072 | overlap 1977453 GCGGCGGCAAAAAAA TCCAGCG CCG CGGTGAA GGCCAGGGGCAGCGC TERM 1572 1978939 - 1978951 + H 86 -4.7 -5.13722 | TGCCGACGGGGCGGT GCGGC AGA GGCGC TTTTATTTTGATAGC Ajs_1892 1979182 - 1981656 + | putative GAF sensor protein Ajs_1893 1982369 - 1981740 - | uracil phosphoribosyltransferase TERM 1573 1982436 - 1982422 - R 74 -9.2 -3.86346 | overlap 1982403 1982423 TCAGTCTGCCAGAAA GCGCGC GTA ACGCGC CAGATCGACGTTGCC Ajs_1894 1983381 - 1982407 - | pyridoxal-5'-phosphate-dependent enzyme, beta subunit TERM 1574 1982680 - 1982641 - G 74 -12.1 -3.62096 | gap 1, opp_overlap 1982619, overlap 1982643 GCGCACGATGTCAAA CACCAGCGGC-CCCAGGC TTTGC GCCTGGGCGCCGTCGGCA ATGGTGCGTGGCGTG TERM 1575 1982678 - 1982643 - G 80 -14.7 -3.39018 | gap 1, opp_overlap 1982619, overlap 1982641 GCACGATGTCAAACA CCAGCGGC-CCCAGGC TTTGC GCCTGGGCGCCGTCGG CAATGGTGCGTGGCG TERM 1576 1983161 - 1983143 - G 76 -6.6 -4.56597 | opp_overlap 1983149 1983150, overlap 1983147 TTGCCTGCTGAAAAA GCCAGCAC GCC GTGGCGGC GCTGCTCTGGCGTGA TERM 1577 1983537 - 1983549 + r 78 -3.3 -5.0133 | overlap 1983536 CAGCCCTGTCTGTGC CCGCT GCC GGTGG TTTTTTGGGGGGCTG Ajs_1895 1984838 - 1983579 - | nitric oxide dioxygenase TERM 1578 1984019 - 1984006 - G 70 -3.7 -4.46212 | overlap 1984007 TCGGCCAGCACAAAA TCGCC AGCG GGCGG GAACACGTCCAGCGC TERM 1579 1984126 - 1984113 - G 75 -4.5 -4.70659 | gap 1, overlap 1984114 1984115 GCTGATACGCAAAAA CTGCCC GTT GGGC-G CTGCCGACAGCGAGT TERM 1580 1984940 - 1984921 - H 73 -3 -4.74453 | gap 1, overlap 1984923 GAATACAGTCAAAAA GA-TACTTT GTT AAAGTAGTC AAAAAGACTCTTGAA TERM 1581 1986266 - 1986243 - g 70 -10.3 -3.65902 | gap 1, opp_overlap 1986227 1986227 CGCAGCGCACTCAAA GCGC-TGGCC GGTTT GGCCACGCGC CCGCGCATCCTCAGT Ajs_1896 1984965 - 1986560 + | anaerobic nitric oxide reductase transcription regulator Ajs_1897 1988300 - 1986789 - | protein of unknown function DUF853, NPT hydrolase putative TERM 1582 1986961 - 1986996 + g 77 -5.3 -4.66833 | gap 2, overlap 1986962 1986994 TTGAGCCCGCCCATC AGGC-CCTCGTC-GGCC GCTT GGCCGGGCGCGGTGCCG TTTTTGCCGTTGCCC TERM 1583 1986994 - 1987032 + g 81 -8.1 -4.64657 | gap 1, overlap 1986962 1986961 TGGCCGGGCGCGGTG CCGTTTTTGCCGTTGCCC TCGG GGGCGTTGGC-AGAGCGG TTTTTCAGGATTTCG TERM 1584 1987254 - 1987304 + g 70 -8.9 -3.96148 | gap 1, overlap 1987257 GGTGATGGCGGTTTC GATGTCGAGGCC-CGGCTTTTGCC GCAT GGTGGTGGCCGTGGCCTTGACGGC TTTCTGGTCGCGCGG TERM 1585 1988027 - 1988065 + g 75 -9.5 -4.13343 | gap 2, overlap 1988029 1988042 1988042 GCGTGGTGGGGCAGG CGGTGGGCTCGGGCGCGGC CAA GCCGCGGTCG-GCC-AGCG TTTTGGCCAGTTTGT TERM 1586 1988753 - 1988774 + G 70 -10.1 -3.75153 | opp_overlap 1988752 GTACGGCGGCAACAT GGGCACGGA AGGC TCCGTGGCC TTTCAGTTCAAGAAC TERM 1587 1989021 - 1988996 - g 73 -13.3 -3.28924 | CATGCGCCCCGAGAA CACCATCGCCC TGGA GGGCGACGATG TCGCGCGCATGCAAA Ajs_1898 1988382 - 1989101 + | hypothetical protein Ajs_1899 1989123 - 1990409 + | phosphoribosylamine--glycine ligase Ajs_1900 1990406 - 1991410 + | coproporphyrinogen III oxidase TERM 1588 1991444 - 1991476 + F 74 -2 -4.84527 | gap 2, opp_overlap 1991443, overlap 1991419 1991444 1991437 1991445 CTATAATTTCAATAG C-TGCCT-GCGCTTGA TCA TCAAGCGCCAGACCCG TTTTTGATATCTGAA Ajs_1901 1991581 - 1992405 + | iojap-like protein Ajs_1902 1992421 - 1992888 + | hypothetical protein TERM 1589 1993164 - 1993189 + G 76 -5.9 -4.46212 | overlap 1993165 1993166 CGTGGTGCGCCATGC GCGGCGCGGGC TGTC GCCAGCGCCCA TTTTGTGCTCCGACA Ajs_1903 1992940 - 1993566 + | maf protein Ajs_1904 1994358 - 1993594 - | CRP/FNR family transcriptional regulator Ajs_1905 1996040 - 1994412 - | cytochrome d1, heme region TERM 1590 1994462 - 1994472 + g 74 -2.4 -4.72272 | TCCAGACGTTGTATT TCCC CAC GGGC TTTTTCATGGGCAGG TERM 1591 1994747 - 1994737 - G 76 -8.2 -4.24342 | CTGCGCATGAAGAAA CCCG GGC CGGG CGTGGCGATGGTGCG TERM 1592 1996029 - 1996041 + g 75 -4.7 -4.59773 | GGGCCGCTTCGCCGC GGCGG TAT CCACC TTTTTCGCGATAGCG Ajs_1906 1997325 - 1996105 - | radical SAM domain-containing protein Ajs_1907 1997810 - 1997328 - | AsnC family transcriptional regulator TERM 1593 1997412 - 1997435 + g 72 -13.2 -3.15544 | gap 1 GCAGGCATCGCCCAG CAGGCCG-GCA ATC TGCTCGGCCTG TTGCTCGACATGCGC Ajs_1908 1998282 - 1997800 - | AsnC family transcriptional regulator Ajs_1909 1999315 - 1998269 - | AsnC family transcriptional regulator Ajs_1910 2000533 - 1999319 - | cytochrome d1, heme region TERM 1594 2000531 - 2000548 + g 71 -3.3 -4.63218 | overlap 2000534 CAGGGCACGCCGTTT CATGGGG CGGA CCTCCTG TTTTCTTCGGGGAAC Ajs_1911 2000874 - 2000530 - | hypothetical protein Ajs_1912 2002618 - 2000894 - | nitrite reductase (NO-forming) TERM 1595 2000981 - 2001012 + g 75 -9.4 -4.04295 | gap 1 CACGGACTTCAGCTT GAGCGTCTTGTCGTC CAC GACGACCAG-CGCAC TTTGCTTGTCCTTGG TERM 1596 2002483 - 2002511 + g 77 -3.8 -4.84359 | gap 2, overlap 2002486 GGTACATGGGCACTT CCGCCA-GC-GGCG ATC CGCCTGCCTGGTAG TTTTTCTCGGCCTCC Ajs_1913 2002805 - 2003653 + | uroporphyrin-III C-methyltransferase Ajs_1914 2003730 - 2005217 + | ribonuclease G Ajs_1915 2006774 - 2005623 - | putative aminotransferase TERM 1597 2005697 - 2005687 - G 82 -4.6 -4.8622 | overlap 2005688 TTGGCGAAGCAAAAA CGCA CCA CGCG CTGGTCGAAGCCGTC TERM 1598 2006126 - 2006098 - G 71 -14.5 -2.54634 | opp_overlap 2006121, overlap 2006097 CTGGAGACGATGAAG GCGCGTTCCGCGA GGC CCGCGAAGCGCGC GGCGCTCTGGTGCTC Ajs_1916 2006981 - 2008069 + | transposase, IS4 family protein Ajs_1917 2009181 - 2008240 - | transcriptional regulator CysB-like protein Ajs_1918 2009639 - 2009256 - | cobalamin (vitamin B12) biosynthesis CbiX protein Ajs_1919 2010767 - 2009658 - | permease YjgP/YjgQ family protein TERM 1599 2010354 - 2010377 + g 83 -8.8 -4.65895 | overlap 2010318 2010345 GATCTGGCCCAGCCG GCGGGCTTTC ACGA GAGAGGCCGC TTTTTCGCTCGCCGG Ajs_1920 2011855 - 2010764 - | permease YjgP/YjgQ family protein Ajs_1921 2011879 - 2013369 + | PepA aminopeptidase TERM 1600 2013489 - 2013464 - g 82 -11.9 -4.07568 | gap 1 CGCCTGGTGCGAAAA GCCACCCG-GCA GGA TGCGCGGGTGAC GGTCACGGGTGATGC Ajs_1922 2013395 - 2013835 + | DNA polymerase III chi subunit, HolC Ajs_1923 2013832 - 2014263 + | hypothetical protein Ajs_1924 2015421 - 2014342 - | integrase catalytic subunit Ajs_1925 2015585 - 2016718 + | extracellular ligand-binding receptor TERM 1601 2016761 - 2016792 + T 86 -13.2 -4.07568 | gap 1, opp_overlap 2016767, overlap 2016761 2016767 CGGGGCCGTTTGAGT C-GAAAAGGGGCTTC ATC GAAGCTCCTTTTCAG TTTTCAGCGGCGCAC TERM 1602 2016761 - 2016791 + T 75 -13.4 -3.04398 | opp_overlap 2016767, overlap 2016761 2016767 CGGGGCCGTTTGAGT CGAAAAGGGGCTTC ATC GAAGCTCCTTTTCA GTTTTCAGCGGCGCA TERM 1603 2016767 - 2016785 + T 95 -11 -4.4267 | opp_overlap 2016767, overlap 2016761 2016761 CGTTTGAGTCGAAAA GGGGCTTC ATC GAAGCTCC TTTTCAGTTTTCAGC TERM 1604 2016785 - 2016767 - T 76 -8.8 -4.13767 | opp_overlap 2016767 2016761 2016761 CGTTTGAGTCGAAAA GGGGCTTC ATC GAAGCTCC TTTTCAGTTTTCAGC Ajs_1926 2017803 - 2016796 - | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding TERM 1605 2017598 - 2017625 + g 74 -15.6 -2.64735 | GCGATGAGCTTGAGC CGCGGCAACTTG TCCA CCAGTTGCCGCG TGATCTGCGTGCGAT TERM 1606 2017815 - 2017836 + H 74 -5.1 -4.62441 | gap 1, overlap 2017816 TCATCTTGTCCACTT ACTGCG-CAC ACA GTGGCGCAGC TTTGTTTCTCTGCAA TERM 1607 2018558 - 2018537 - g 72 -7.1 -4.27316 | overlap 2018542 CGTGGGAATGGAAAA GGCAACGGC AACG GCCGAGGCC ACGGGCGCGGTGATC Ajs_1927 2018021 - 2018578 + | hypothetical protein Ajs_1928 2018714 - 2019466 + | hypothetical protein TERM 1608 2019786 - 2019763 - g 70 -11.7 -3.40597 | overlap 2019761 CGGCCGAGGCAAACA CGGCCCTGG ACGCCG CCAAGGCCG CTGTCACCCAGGCAG Ajs_1929 2019561 - 2020001 + | UspA domain-containing protein TERM 1609 2020026 - 2020054 + T 100 -17.5 -4.07687 | opp_overlap 2020031 TACGTCGCCACACAT GAAAACGGCTCGC AAC GCGAGCCGTTGTC TTTTCGCGCCCCGAT TERM 1610 2020049 - 2020031 - T 100 -16 -4.39166 | opp_overlap 2020026 CGCCACACATGAAAA CGGCTCGC AAC GCGAGCCG TTGTCTTTTCGCGCC Ajs_1930 2021089 - 2020097 - | hypothetical protein Ajs_1931 2022423 - 2021239 - | beta-ketothiolase Ajs_1932 2023315 - 2022533 - | short-chain dehydrogenase/reductase SDR TERM 1611 2023363 - 2023353 - R 79 -8.2 -4.25283 | overlap 2023354 ACGCGGCGATCAAAA CGGC GGT GCCG AGGCAAACGCGCACC TERM 1612 2023401 - 2023371 - R 91 -16.8 -3.64703 | overlap 2023354 CGGTGCCGAGGCAAA CGCGCACCAGCCAC CCT GCAGCGGGTGCGCG AACTCCAGCACGCAG Ajs_1933 2024015 - 2023347 - | ribosomal large subunit pseudouridine synthase A Ajs_1934 2026233 - 2024071 - | signal transduction histidine kinase, nitrogen specific, NtrB Ajs_1935 2026710 - 2026309 - | peptidylprolyl isomerase, FKBP-type TERM 1613 2026752 - 2026736 - R 76 -7.9 -4.36596 | opp_overlap 2026736 2026735, overlap 2026732 TTCAGAAGCAACAAA GGCCCGA TGG TAGGGCC GTTGTGAATGCCTGA Ajs_1936 2029675 - 2026781 - | glycine dehydrogenase TERM 1614 2027569 - 2027597 + g 70 -11.5 -3.36273 | CGTCGCCGCCGAACT CGCCCGGCGCGGC CAC GCCGACCAGGGCG TTCATGTTGGCGCCG Ajs_1937 2030118 - 2029744 - | glycine cleavage system H protein TERM 1615 2030062 - 2030080 + g 75 -13.8 -3.22884 | overlap 2030050 2030039 2030069 GATGCCGACGACGGC CGCGGCCG GGT CGGCTGCG TTGATCCATTCATGG Ajs_1938 2031352 - 2030222 - | glycine cleavage system T protein TERM 1616 2031530 - 2031511 - R 76 -11.4 -3.78329 | opp_overlap 2031525 CTCCAGCAAGGGAAA CACCCGCA TCCC TGCGGGCG TGTCGCCAGTCCTTT Ajs_1939 2032907 - 2031630 - | TRAP dicarboxylate transporter, DctM subunit TERM 1617 2032939 - 2032959 + r 90 -19.7 -2.60244 | overlap 2032935 TCATTTCATGTACCC GCGGCCCCC CGA GGGGGCCGC TCACTTGCTTGAGGC Ajs_1940 2033484 - 2032990 - | tripartite ATP-independent periplasmic transporter DctQ TERM 1618 2033537 - 2033512 - R 100 -13.3 -5.20606 | AAATATGAATAAAAA CGCCCGTGG CGCATGAT CCACGGGCG GTAGCAGCTACTGAA Ajs_1941 2034533 - 2033562 - | TRAP dicarboxylate transporter, DctP subunit Ajs_1942 2034818 - 2035285 + | AsnC family transcriptional regulator Ajs_1943 2036432 - 2035308 - | TonB-dependent receptor TERM 1619 2036684 - 2036662 - H 74 -12.7 -3.32402 | gap 1, opp_overlap 2036668, overlap 2036660 2036658 2036663 CCCACATTAAAGAGA GCC-GCCGGG CTTG CCCGGCAGGC CGTTGGTCGGCGGCA Ajs_1944 2036753 - 2037979 + | transposase IS116/IS110/IS902 family protein Ajs_1945 2038924 - 2038022 - | TonB-dependent receptor, plug Ajs_1946 2039038 - 2040051 + | AraC family transcriptional regulator TERM 1620 2040065 - 2040033 - T 72 -4 -4.56597 | gap 1, overlap 2040034 2040035 CTTTTCGCCCAAAAA TCTCCGCGCGA-AGC GCTG ACTACCGCGCGGCGC ACGCTTCCCGTATTT Ajs_1947 2040936 - 2040142 - | ABC transporter related Ajs_1948 2041840 - 2040953 - | inner-membrane translocator TERM 1621 2041892 - 2041865 - R 100 -20 -4.83243 | CGGATAGAAAACAAA GCAGGAGCCATG GCGC CATGGCTCCTGC GTGGGGTGCCAGTGG Ajs_1949 2042914 - 2041946 - | hypothetical protein Ajs_1950 2044839 - 2043133 - | electron-transferring-flavoprotein dehydrogenase TERM 1622 2044667 - 2044677 + g 77 -6.8 -4.56597 | overlap 2044663 AGGATGTGCGCGCCC GGCT CGG AGCC TTTTTCGAGCACGAC TERM 1623 2044885 - 2044871 - H 78 -7 -4.64766 | overlap 2044873 TCGATAGTGGAAAAA GGCAGG GTG CCGGCC TGGGGAGCGATGGCC Ajs_1951 2045403 - 2046929 + | methyl-accepting chemotaxis sensory transducer Ajs_1952 2048354 - 2046999 - | integral membrane sensor signal transduction histidine kinase TERM 1624 2047478 - 2047488 + g 72 -6.8 -4.18018 | ACTCGGCGCGCGACA GCTG CAG CAGC TTTTCGGTGCGGCGG Ajs_1953 2049031 - 2048351 - | two component transcriptional regulator Ajs_1954 2049173 - 2049874 + | PAP2 (acid phosphatase) superfamily protein-like protein TERM 1625 2049888 - 2049859 - f 72 -7.2 -4.128 | gap 1, opp_overlap 2049859, overlap 2049855 AGCGGCAGATACAAA GCTGAACGAAGCC TGAGC GGCGTC-TTCAGC TTGGCTTCAGTGGCA Ajs_1955 2049921 - 2051690 + | sulfatase TERM 1626 2051730 - 2051694 - T 100 -8.7 -5.30616 | opp_overlap 2051694 2051696, overlap 2051696 GCATCCAAATAAAAA CAGCCGCCAGCGCTT ATCTATA AAGCGCGAGCAGCTA TTGTTTTAAGAGCGT TERM 1627 2051728 - 2051696 - T 83 -9.1 -4.2793 | opp_overlap 2051694 2051696, overlap 2051694 ATCCAAATAAAAACA GCCGCCAGCGCTT ATCTATA AAGCGCGAGCAGC TATTGTTTTAAGAGC Ajs_1956 2052335 - 2051754 - | uncharacterized peroxidase-related enzyme Ajs_1957 2053035 - 2052352 - | DTW domain-containing protein TERM 1628 2053071 - 2053051 - R 72 -3.9 -4.56597 | opp_overlap 2053054 2053056 2053057, overlap 2053053 2053056 2053057 CGGGGTTGTCAAAAA CAGAAGCGC CCA GCGCTTGTC AGGTAAGGGCTGGGC TERM 1629 2053054 - 2053090 + r 76 -7.9 -4.3534 | opp_overlap 2053053 2053051 2053056 2053057, overlap 2053056 2053057 GGTTGTCAAAAACAG AAGCGCCCAGCGCTTGT CAG GTAAGGGCTGGGCGGTA TTTTGATGCTTGGCC TERM 1630 2053056 - 2053088 + r 74 -10.5 -3.77927 | opp_overlap 2053053 2053051 2053056 2053057, overlap 2053054 2053057 TTGTCAAAAACAGAA GCGCCCAGCGCTTGT CAG GTAAGGGCTGGGCGG TATTTTGATGCTTGG TERM 1631 2053088 - 2053056 - R 76 -9.1 -4.07746 | opp_overlap 2053054 2053056 2053057, overlap 2053053 2053051 2053057 TTGTCAAAAACAGAA GCGCCCAGCGCTT GTCAGGT AAGGGCTGGGCGG TATTTTGATGCTTGG TERM 1632 2053057 - 2053087 + r 74 -14 -2.86033 | opp_overlap 2053053 2053051 2053057 2053056, overlap 2053056 2053054 TGTCAAAAACAGAAG CGCCCAGCGCTTGT CAG GTAAGGGCTGGGCG GTATTTTGATGCTTG TERM 1633 2053087 - 2053057 - R 71 -12.6 -3.03925 | opp_overlap 2053056 2053054 2053057, overlap 2053053 2053051 2053056 TGTCAAAAACAGAAG CGCCCAGCGCTT GTCAGGT AAGGGCTGGGCG GTATTTTGATGCTTG Ajs_1958 2054593 - 2053142 - | catalase Ajs_1959 2054769 - 2056049 + | FAD-dependent pyridine nucleotide-disulphide oxidoreductase Ajs_1960 2056714 - 2056169 - | LuxR family transcriptional regulator TERM 1634 2056766 - 2056751 - H 86 -4.7 -5.13521 | AAACTACTTAAAAAA CTACG TAGTAT CGTAG CGTATCCACCCAGCA TERM 1635 2057108 - 2057147 + G 78 -14.2 -3.61398 | gap 1, opp_overlap 2057117 CCCGCAGGGCACGCT GGCCGAGAAGCTGCGTGCC GGC GGCGCG-GGCATCCCGGCC TTCTTCACCAAAACC Ajs_1961 2056797 - 2057504 + | 3-oxoacid CoA-transferase, A subunit Ajs_1962 2057508 - 2058146 + | butyryl-CoA:acetate CoA transferase TERM 1636 2058208 - 2058227 + F 100 -15 -5.69068 | opp_overlap 2058205 GGGCCAAAACTACGG GCCGGGTG GGAT CACCCGGC TTTTTTGTCTTTTTG Ajs_1963 2058298 - 2059611 + | metal dependent phosphohydrolase TERM 1637 2060066 - 2060049 - g 75 -9.1 -4.08144 | opp_overlap 2060060, overlap 2060052 CTGACCAATCAGAAA CAAGGCG TGAG CGCCCTG GGGCTGCAGCGCGTA Ajs_1964 2059746 - 2060747 + | hypothetical protein Ajs_1965 2060823 - 2061590 + | hypothetical protein TERM 1638 2062698 - 2062737 + GF 89 -17 -3.14132 | overlap 2062685 GCGGCCGCTGGCCCT GCGCGGCAGCCGGCCTTG TCTG CACGGCCAGCCGCTGCGC TTGCTGGACGGGCCG Ajs_1966 2061556 - 2062965 + | hypothetical protein Ajs_1967 2062962 - 2066156 + | DNA polymerase III, alpha subunit Ajs_1968 2067473 - 2066220 - | Sel1 domain-containing protein Ajs_1969 2069254 - 2067509 - | hypothetical protein TERM 1639 2069338 - 2069286 - R 100 -24.7 -3.05384 | opp_overlap 2069336 CTTCGCGTTATCCAA CCCTCTGGCGCGGCCGAGCAGGCGC GCG GCGCATGCCCGGCCGCGCCCGCACG CTGGTGGCCGTCACC Ajs_1970 2069768 - 2069349 - | hypothetical protein TERM 1640 2069826 - 2069800 - R 100 -17.3 -4.8543 | overlap 2069788 CAACCTGCACAAAAA GCGCCAGGCCT TCAGT AGGCCCGGCGC TCGCGGACTCACCAG Ajs_1971 2070425 - 2069835 - | hypothetical protein TERM 1641 2071266 - 2071290 + r 73 -6.4 -4.26344 | AGGACAGTGCGCGCA TGCCGGATCG CAATA CGATCTGGAA TTTTCGTGAGCGTCT TERM 1642 2072293 - 2072274 - R 71 -13.6 -2.51702 | opp_overlap 2072273, overlap 2072273 2072271 GAACAGCATGAAGAT GCATGGCG TTTT CGCCATGC CTTGGATGCTCGGCT Ajs_1976 2075007 - 2073679 - | transposase IS116/IS110/IS902 family protein Ajs_1977 2077232 - 2075379 - | phage integrase family protein Ajs_1978 2079203 - 2077713 - | succinate semialdehyde dehydrogenase Ajs_1979 2079348 - 2081972 + | alanyl-tRNA synthetase TERM 1643 2082112 - 2082085 - T 76 -8.3 -4.18018 | overlap 2082087 CGGGGCTAGGCAAAA GACGGCAGGCG CAGCAC CGTCTGCCGGC AAATGGGCTAGAACA TERM 1644 2082110 - 2082087 - T 71 -9.5 -3.69216 | overlap 2082085 GGGCTAGGCAAAAGA CGGCAGGCG CAGCAC CGTCTGCCG GCAAATGGGCTAGAA Ajs_1980 2083124 - 2082120 - | diguanylate cyclase Ajs_1981 2083900 - 2083145 - | tRNA (guanine-N(7)-)-methyltransferase TERM 1645 2083375 - 2083397 + g 71 -9 -3.8062 | CCAGCTGTGCCACCA GCGGCGGCTG GAT CAGGCGGCGC TTGTTGTGGCGCTTC Ajs_1982 2084868 - 2083897 - | glutamate--tRNA ligase Ajs_1983 2085968 - 2084865 - | FAD dependent oxidoreductase TERM 1646 2085727 - 2085689 - G 70 -10.8 -3.56643 | GGCACAGGCCGGAAA CGGTGTCCAGCGCCCGCT GAA AGCGTGCGTCGCGCACCG TGAAGTACTGCGCGC Ajs_1984 2087003 - 2086065 - | LysR family transcriptional regulator TERM 1647 2087543 - 2087519 - g 73 -6.3 -4.3129 | overlap 2087540 GAGCTATGAGCAAAA GCGCTTTCCCG ATG CCGACAAGCGC GGCCAGTTGCGTCGC Ajs_1985 2087121 - 2087822 + | pirin domain-containing protein TERM 1648 2088105 - 2088115 + G 77 -6.8 -4.44667 | overlap 2088085 CTGGCCGTGTTCACG CTGG CGG CCAG TTTCTTCTTCCACGC Ajs_1986 2087859 - 2088272 + | DoxX family protein TERM 1649 2088304 - 2088348 + T 100 -16.5 -4.08767 | overlap 2088305 AGCTGCTTGCGCTTG ATGGATGGGCCTTGGAGGTCG ATA TGACCTGCAAGGCCCATCAAC TTTTGGAACGCTGCC TERM 1650 2088305 - 2088347 + T 93 -20 -3.05046 | overlap 2088304 GCTGCTTGCGCTTGA TGGATGGGCCTTGGAGGTCG ATA TGACCTGCAAGGCCCATCAA CTTTTGGAACGCTGC Ajs_1987 2089084 - 2088344 - | arginyl-tRNA-protein transferase aat 2089845 - 2089081 - | leucyl/phenylalanyl-tRNA--protein transferase Ajs_1989 2090315 - 2089884 - | glyoxalase/bleomycin resistance protein/dioxygenase Ajs_1990 2091739 - 2090402 - | glucarate dehydratase TERM 1651 2091814 - 2091772 - R 95 -9.8 -4.59424 | gap 2, opp_overlap 2091792 AAACGGAAATGAAAA CGGCC-CGG-ACGTCAGGCG GAGTG CGCCTGCCGGGCCGCAGCCG CCGACCAGGGCACTT Ajs_1991 2092769 - 2091783 - | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding TERM 1652 2092289 - 2092266 - G 74 -12.4 -3.60296 | gap 1, overlap 2092267 CACCTGCATGTCAAA GCCCGCGGCGC GGC GCGCCACGG-C AGCGCCGATGCGCCC Ajs_1992 2093790 - 2092837 - | hypothetical protein TERM 1653 2092990 - 2093008 + g 77 -10.2 -3.96068 | CTCATTGATGGCCTG GATGGCGG CGT CCGCCAGC TTCTTCTTCACATCC TERM 1654 2093752 - 2093781 + g 89 -5.6 -5.15634 | gap 1, opp_overlap 2093751, overlap 2093754 GGCCACGGCAGACAG GGCCACGCTGGCC GCGAG GGCCA-CGAGGAC TTTTTTCATGGGGTG Ajs_1993 2094771 - 2093860 - | 5-dehydro-4-deoxyglucarate dehydratase TERM 1655 2094232 - 2094180 - G 79 -16.3 -2.87211 | gap 2 AGGCGGCGGCATAGA CCTCGGCCGTGGGCAGGCCGCCCAG GTAGG CCAGGCGGTC-GCCCATGGCC-AGG AACATGGAGGCCATG TERM 1656 2094455 - 2094486 + g 72 -14.4 -3.05384 | overlap 2094451 ATGAGCAGGATGCCG TGCGCGCCGGCC TTCTCGGC GGCCTGCGCGCA TTCGATGGCAAAGCG Ajs_1994 2095832 - 2094864 - | hypothetical protein Ajs_1995 2096749 - 2095943 - | GntR family transcriptional regulator TERM 1657 2097006 - 2097027 + G 72 -11.5 -3.53012 | opp_overlap 2097000 TCAACGAGAGCTATG GCGACCAGC CCAT GCTGGACGC TTTGGCCAGGGCGGC TERM 1658 2097673 - 2097703 + G 72 -11.8 -3.57561 | GCGCGAAGGCGATGT GCCGCTGGCCACCA ACA TGGTGGTCACCGAC TTTGCCGAATTCCGC Ajs_1996 2096846 - 2098153 + | mandelate racemase/muconate lactonizing protein TERM 1659 2098460 - 2098412 - g 83 -13.9 -3.8211 | gap 2 GGTCATTGACAACAA GGGCG-GCGCG-GGCGGTAGC GTGGGATCG GCCATCGCCGCGCGCGCGCCC GCCGACGGCTACACC Ajs_1997 2098185 - 2099189 + | hypothetical protein Ajs_1998 2099332 - 2100894 + | galactarate dehydratase TERM 1660 2100999 - 2101044 + G 72 -7.3 -4.27316 | gap 1, overlap 2100999 GGCGCCATTTCCTGG C-CGGCGCTGTGGCCGCCACGG CCG CAGGTGCTGCCACGGCGCAGAG TTTTGAATTCAAGCC Ajs_1999 2100944 - 2102002 + | gluconolactonase TERM 1661 2102041 - 2102010 - T 81 -13.6 -3.59979 | overlap 2102011 CTGTCTGAGTGCAAA CGTCCCCGTGGCGG GCGC CCGCCACAGGGCAG GGGCCGCCCCATGAG TERM 1662 2102039 - 2102011 - T 75 -14.6 -2.75844 | gap 1, overlap 2102010 TGTCTGAGTGCAAAC GTCCCCGTGGCGG GCGC CCGCCACAGGG-C AGGGGCCGCCCCATG TERM 1663 2102126 - 2102179 + T 100 -15.3 -4.28994 | gap 1, opp_overlap 2102123 2102132, overlap 2102133 2102138 CGCACAAACGCACCG CATCAACGGCAACAGCCGCCACCCCC GTG GGGGTTGGCGGCTGTT-TCGCTTCTG TTTTGATAGCTGCTG TERM 1664 2102173 - 2102132 - T 95 -19.5 -3.1706 | gap 1, opp_overlap 2102126 2102133 2102138, overlap 2102123 AACGCACCGCATCAA CGGCAACAGCCGCCACCCCC GTG GGGGTTGGCGGCTGTTTC-G CTTCTGTTTTGATAG TERM 1665 2102133 - 2102174 + T 100 -19.5 -3.99481 | gap 1, opp_overlap 2102123 2102132, overlap 2102126 2102138 ACGCACCGCATCAAC G-GCAACAGCCGCCACCCCC GTG GGGGTTGGCGGCTGTTTCGC TTCTGTTTTGATAGC TERM 1666 2102138 - 2102168 + T 100 -22.6 -3.8802 | opp_overlap 2102132, overlap 2102133 2102126 CCGCATCAACGGCAA CAGCCGCCACCCCC GTG GGGGTTGGCGGCTG TTTCGCTTCTGTTTT Ajs_2000 2102626 - 2102288 - | hypothetical protein Ajs_2001 2103875 - 2102694 - | tryptophan synthase subunit beta Ajs_2002 2104126 - 2104512 + | hypothetical protein Ajs_2003 2106291 - 2104939 - | hypothetical protein TERM 1667 2105704 - 2105716 + g 75 -3.3 -4.84359 | opp_overlap 2105704 ATACGTCTTGAAAAG TGCTC GCA GTGCA TTTTTCTCCAAATCC TERM 1668 2105838 - 2105853 + g 79 -4 -4.87786 | gap 1, opp_overlap 2105838 ACTCATCCACTGAAA CG-AAGC CAA GCTTTCG TTTTTCTGCCGTTGG Ajs_2004 2107448 - 2106468 - | transposase, IS4 family protein TERM 1669 2108062 - 2108087 + r 86 -8.9 -4.56597 | opp_overlap 2108062 CTCAAAATAAAAAAA GGCGCTGCAAC GCAA GTCACAGCGCC TTTTTGCAGAAGGCA TERM 1670 2108087 - 2108062 - R 100 -13.3 -6.09196 | opp_overlap 2108062 CTCAAAATAAAAAAA GGCGCTGCAAC GCAA GTCACAGCGCC TTTTTGCAGAAGGCA Ajs_2005 2109006 - 2108119 - | 3-hydroxyisobutyrate dehydrogenase TERM 1671 2108206 - 2108248 + g 74 -7.7 -4.25104 | gap 2 CGCGTAGATTGCGCG CGCCAT-GCCGCCCAG-CGGG GTG CTGGCCTTGGTGGCGATGGCG TTTTCCTGGGCCAGG TERM 1672 2108519 - 2108549 + g 79 -3.1 -5.00616 | overlap 2108502 2108520 2108521 GTCTGGCCCGCGCCC ACGGCGCCGGCGT GGAAG ATGTTGGCGCCCA TTTTTTCCAGCAGGG Ajs_2006 2109503 - 2109099 - | hypothetical protein Ajs_2007 2110739 - 2109573 - | acyl-CoA dehydrogenase domain-containing protein TERM 1673 2110115 - 2110135 + g 100 -12.6 -5.57396 | AGCTGATCTGGCGCG TGGGCTGG CTGTT CCAGCCCA TTTTTTCTTCCTTCT Ajs_2008 2111195 - 2110767 - | hypothetical protein Ajs_2009 2112757 - 2111234 - | methylmalonate-semialdehyde dehydrogenase [acylating] Ajs_2010 2112914 - 2113825 + | LysR family transcriptional regulator TERM 1674 2113869 - 2113850 - T 100 -16.4 -5.03994 | CGGCATACAGAAAAA GGCCCCCG CATG CGGGGGCC TTACGGACCAGGGGA Ajs_2011 2114287 - 2113895 - | hypothetical protein Ajs_2012 2114302 - 2114775 + | CBS domain-containing protein TERM 1675 2114821 - 2114780 - T 74 -14.4 -2.57683 | gap 2, opp_overlap 2114791, overlap 2114768 2114779 AGACCTCGTGACAAC GGCC-GCG-CCCACGGCGGC CCTC GCCACAGCGGGGCGCAGGCC CCCCGTTTTTTTATA TERM 1676 2114791 - 2114826 + T 100 -11 -5.71712 | gap 1, opp_overlap 2114768 2114780 2114779 CAACGGCCGCGCCCA CGGCGGCCCT-CGCCAC AGC GGGGCGCAGGCCCCCCG TTTTTTTATATGCGC Ajs_2013 2114990 - 2114832 - | hypothetical protein TERM 1677 2115809 - 2115765 - g 77 -15.5 -3.01791 | overlap 2115751 AGGGCGGCGGCAACA GCACGGCCCTGGCCAGCGCCA CGC TGGCGCCGGACGCGGCGGCGC TGCAGGACATGAAAG Ajs_2014 2115344 - 2116534 + | glucose sorbosone dehydrogenase Ajs_2015 2116689 - 2117303 + | isochorismatase hydrolase Ajs_2016 2117524 - 2119419 + | propionyl-CoA synthetase TERM 1678 2119448 - 2119480 + T 100 -20.7 -5.5604 | GCTCTCTATTTGATA GCTTCCAGCGCTTGT TGG ACGGGCGCTGGAAGC TTTTTTATTGCTTGA Ajs_2017 2123407 - 2119508 - | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) TERM 1679 2123607 - 2123635 + r 83 -13.1 -3.85698 | opp_overlap 2123611 CCGCAGGCGTCGGGT GAAACCCTGCCGC AGC GCGTCAGGGTGTC TTTGTACCCGGCCGC TERM 1680 2123631 - 2123611 - R 76 -12.5 -3.53091 | opp_overlap 2123607 AGGCGTCGGGTGAAA CCCTGCCGC AGC GCGTCAGGG TGTCTTTGTACCCGG Ajs_2018 2124564 - 2123626 - | hypothetical protein Ajs_2019 2125109 - 2124561 - | methylated-DNA--protein-cysteine methyltransferase Ajs_2020 2126723 - 2125170 - | DNA-O6-methylguanine--protein-cysteine S-methyltransferase / DNA-3-methyladenine glycosylase II / transcriptional regulator Ada TERM 1681 2125385 - 2125332 - G 81 -15.1 -3.53811 | gap 1, opp_overlap 2125353 GTCACCGGCCGGAAA GGCGTCGGGCCAGCGCAGTGC-GCGC ATG GCGATGTACTGCGCCGTCCAGTCGCC AATACCGGGCAGGGC TERM 1682 2126546 - 2126530 - G 90 -2.9 -5.44119 | GCCAGCGTAAAAAAA CGGCA GTTTTCG CGCCG GGGTGTGCGTACGGC TERM 1683 2126656 - 2126623 - G 72 -8.7 -4.08064 | gap 1 AACCGTCCGTCAAAA CGCGCATCCCGGGCCC GCA GGGCCAGGTA-GCGGG CCTCGTCGTCGCCCG TERM 1684 2126994 - 2127015 + G 78 -13.7 -3.53012 | gap 1, opp_overlap 2126988 GCTCAACGACGACGT GGCCCGTGCC CTC GGC-CGGGCC TTTGGCACCGCCGCA Ajs_2021 2126920 - 2128308 + | phosphomannomutase TERM 1685 2128863 - 2128844 - g 93 -10.6 -4.4078 | overlap 2128846 GCGGCTCAACGAAAA GTCGCGCG CCGG CGCGCGCC GGCTGGGCTGGCTGT Ajs_2022 2128329 - 2129690 + | 3-deoxy-D-manno-octulosonic-acid transferase domain-containing protein TERM 1686 2129669 - 2129704 + F 71 -9.7 -3.74693 | gap 1 GCGCCTGCGCGAGGC CGTGGACG-ACCGTTC CGACT GAGCGGTCCGCCCGCG TTTCCTGCGATCACG TERM 1687 2130250 - 2130226 - g 72 -13.6 -3.17075 | gap 1, opp_overlap 2130228 GTCGCTGCAATTGAA CGCCAGC-GCC GCGG GGCCGCTGGCG CGCGAGGGGTCGCTG TERM 1688 2130572 - 2130541 - g 72 -13.7 -3.06133 | gap 1, opp_overlap 2130571, overlap 2130544 CAAGCCTGCAGGCAA CGA-GGCGGCGCAG ACGCA CAGCGCCGCCATCG TGGGCAGCGACGACG Ajs_2023 2129795 - 2132521 + | GCN5-related N-acetyltransferase Ajs_2024 2132528 - 2132881 + | hypothetical protein Ajs_2025 2132926 - 2133507 + | deaminase-reductase domain-containing protein Ajs_2026 2134808 - 2133591 - | TolC family type I secretion outer membrane protein TERM 1689 2133901 - 2133867 - G 100 -19.3 -3.63515 | gap 1, opp_overlap 2133870 CTGCACGCCGAAGAA CGCGGCGC-GCGTGGC CTGG GCCACGCTGCGGCGCG CATGGTCCAAGTCGG TERM 1690 2133870 - 2133924 + g 100 -19.3 -3.65812 | opp_overlap 2133867, overlap 2133923 CACGCCGAAGAACGC GGCGCGCGT-GGCCTGGGCCACGCTGC GGC GC-GCATGGTCCAAGTCGGCGCGCGCC TTGTCTTCCAGCGAC Ajs_2027 2135332 - 2134994 - | rhodanese domain-containing protein Ajs_2028 2136074 - 2135364 - | methyltransferase type 11 Ajs_2029 2136784 - 2136122 - | TetR family transcriptional regulator Ajs_2030 2136915 - 2137460 + | peptide methionine sulfoxide reductase TERM 1691 2137507 - 2137526 + F 71 -4.8 -4.42386 | overlap 2137508 CCTCCGCCTTCCCAC AGCGGCGC ATCC GCGCAGCC TTTTGTGAATCCCCG TERM 1692 2137567 - 2137591 + F 83 -15 -3.51232 | gap 1, overlap 2137564 2137568 CGCTATCCTCCCGGG C-CCGCGCCGC AACA GCGGCGCGGTG TTACTTTGGAGGAAG TERM 1693 2137568 - 2137589 + F 93 -18.7 -3.33151 | overlap 2137567 2137564 GCTATCCTCCCGGGC CCGCGCCGC AACA GCGGCGCGG TGTTACTTTGGAGGA Ajs_2031 2137613 - 2137852 + | hypothetical protein TERM 1694 2137946 - 2137983 + G 82 -16.9 -3.04144 | CTGGCTGCTGCTGGC GCTGGTGCTCGCGCCCG CACT CGGGCGCATGCACCAGG TGTTGCACCTGCCCG TERM 1695 2138222 - 2138248 + G 79 -12.9 -3.64703 | CAGGTCCCCCGCGCC GGTGCCGCGCG CGGGC CGGGCGGCGCC TTTCCATGCCCGCGC Ajs_2032 2137878 - 2138282 + | hypothetical protein TERM 1696 2139049 - 2139028 - g 75 -9.3 -4.08767 | overlap 2139029 CGCAGCGCGCGAAAA GGCCGGCGC TGTC GCGCTGACC GGCGGCGCGGGCAAC TERM 1697 2139664 - 2139682 + G 77 -10.2 -3.96148 | opp_overlap 2139660 CGTGCAACCCACCCT CACGCGCC AGT GGGGCGTG TTTCTGCTGGAGGAA Ajs_2033 2138459 - 2140546 + | TonB-dependent receptor TERM 1698 2140605 - 2140552 - f 71 -13.7 -2.62184 | opp_overlap 2140593 2140594 GTCGTTCTGACACCA CCATCCCCGGCCCGCGGCGGATGCG CATG CACATCCGCCGCGCAGCACGCACGG CGGCGCACCAAAGAC Ajs_2034 2140960 - 2141832 + | hypothetical protein Ajs_2035 2141969 - 2143192 + | chromate transporter Ajs_2036 2143709 - 2143257 - | AsnC family transcriptional regulator TERM 1699 2144039 - 2144014 - g 75 -11.9 -3.65046 | gap 1 CCTGCAGGTCAACAA CG-CCGCCACCT TGC AGGTGACGGGCG ACGCCATGCTGGAGG Ajs_2037 2143847 - 2145016 + | saccharopine dehydrogenase Ajs_2038 2146846 - 2145017 - | AMP-dependent synthetase and ligase TERM 1700 2145940 - 2145905 - G 72 -8.3 -4.07568 | gap 1 CTGCGCGGCGCAAAA CCGCTTCCAGCCCACG GCCTG CGCGGCCTGGAA-CAG CTGCATCTTCAAGGG TERM 1701 2146309 - 2146279 - G 71 -14.6 -2.62184 | CGCTGGTGTAGACGA TCGCCGCCAGATCC TCA GGGCCGGGCGGCGA GGGCAGCGGCGTATC Ajs_2039 2147650 - 2147015 - | GntR family transcriptional regulator Ajs_2040 2147775 - 2149937 + | methylmalonyl-CoA mutase TERM 1702 2149991 - 2149958 - f 77 -13.2 -3.63991 | gap 2 CAGCAGCTGCAAGAA GGCATCCTGCACGGCG CGCC CGCCGTGC-GG-CGCC GCGCCATGGCCAAGG Ajs_2041 2149997 - 2150962 + | arginine/ornithine transport system ATPase TERM 1703 2151033 - 2151020 - g 79 -3.7 -4.87786 | overlap 2151022 TCAACTGGAGAAAAA GCGCG AACT CGCCC GCCTGGGCGGTGGCC Ajs_2042 2150988 - 2152520 + | carboxyl transferase Ajs_2043 2152542 - 2154590 + | carbamoyl-phosphate synthase L chain, ATP-binding TERM 1704 2154630 - 2154594 - f 100 -12.3 -4.43309 | overlap 2154596 GAATTTCAATGAAAA CAGCATCTAACGCTTGC CCT GCAAGCGCTAGCAGCTA TCAATAAAGGAGTAA TERM 1705 2154628 - 2154596 - f 81 -12.7 -3.81651 | overlap 2154594 ATTTCAATGAAAACA GCATCTAACGCTTGC CCT GCAAGCGCTAGCAGC TATCAATAAAGGAGT Ajs_2044 2154650 - 2155111 + | lactoylglutathione lyase TERM 1706 2155187 - 2155151 - f 83 -8 -4.58395 | opp_overlap 2155158, overlap 2155154 2155156 2155158 CTGACTGCTGAAAAA CAAGAGAGCCCTGGTC CATGC GACCAGGGCTTTTTTT ATGGTCATGCCGCAT TERM 1707 2155184 - 2155154 - f 91 -9.7 -4.40963 | opp_overlap 2155158, overlap 2155151 2155156 2155158 ACTGCTGAAAAACAA GAGAGCCCTGGTC CATGC GACCAGGGCTTTT TTTATGGTCATGCCG TERM 1708 2155182 - 2155156 - f 78 -12.3 -3.80746 | opp_overlap 2155158, overlap 2155154 2155151 2155158 TGCTGAAAAACAAGA GAGCCCTGGTC CATGC GACCAGGGCTT TTTTTATGGTCATGC TERM 1709 2155180 - 2155158 - f 83 -14.9 -3.47868 | opp_overlap 2155158, overlap 2155156 2155154 2155151 CTGAAAAACAAGAGA GCCCTGGTC CATGC GACCAGGGC TTTTTTTATGGTCAT TERM 1710 2155158 - 2155180 + F 100 -14.9 -5.67967 | opp_overlap 2155158 2155156 2155154 2155151 CTGAAAAACAAGAGA GCCCTGGTC CATGC GACCAGGGC TTTTTTTATGGTCAT TERM 1711 2155826 - 2155836 + G 76 -8.2 -4.18018 | opp_overlap 2155821, overlap 2155825 CCGCCAAGGACGCCG GCGC GAC GCGC TTTTGCATGGGCGCC Ajs_2045 2155477 - 2156529 + | biotin synthase Ajs_2046 2156795 - 2157586 + | short-chain dehydrogenase/reductase SDR TERM 1712 2158040 - 2158065 + G 70 -8.9 -3.90738 | opp_overlap 2158034 2158022, overlap 2158032 2158031 2158043 AGCGCAAGAGCGATG CCGGCGCAGGC ACCG GTCTGCGCTAG TTTGCTCCTTATTTA Ajs_2047 2157649 - 2158065 + | lactoylglutathione lyase Ajs_2048 2158782 - 2158135 - | 2-keto-3-deoxy-phosphogluconate aldolase TERM 1713 2158529 - 2158510 - G 70 -10.6 -3.61178 | overlap 2158493 CGGACTGACGGCAAA CCGCGCCC CGGC GCGCGCGG CAGCCGCCGCATCAG Ajs_2049 2160590 - 2158773 - | phosphogluconate dehydratase TERM 1714 2160737 - 2160718 - R 80 -15 -3.17075 | GGGCGGGGAACCGAA GGCAGGCG CCGC CGCCTGCC CCGCCCTTCGGGCTT Ajs_2050 2161761 - 2160751 - | TRAP dicarboxylate transporter, DctP subunit Ajs_2051 2163086 - 2161806 - | TRAP dicarboxylate transporter, DctM subunit Ajs_2052 2163616 - 2163095 - | tripartite ATP-independent periplasmic transporter DctQ Ajs_2053 2164161 - 2163613 - | carbohydrate kinase TERM 1715 2163821 - 2163794 - G 86 -9 -4.64861 | GCGGGCGAAAAGAAA TGCCCCGCGCGC GTCT GCACGCGCTGCA ATGCCTGCTCATAGT TERM 1716 2163891 - 2163850 - G 71 -9.3 -3.87815 | gap 1, opp_overlap 2163863, overlap 2163856 2163857 GTCCAGCGCCAGAAA CACGA-ATCCCACGCGCGGG TTG CCCGCACGCAGGCGGTCGCG GTATTTGCGGCGCAG TERM 1717 2163884 - 2163856 - G 74 -12.3 -3.50335 | opp_overlap 2163863, overlap 2163850 2163857 CGCCAGAAACACGAA TCCCACGCGCGGG TTG CCCGCACGCAGGC GGTCGCGGTATTTGC TERM 1718 2163883 - 2163857 - G 75 -15.8 -2.69719 | opp_overlap 2163863, overlap 2163856 2163850 GCCAGAAACACGAAT CCCACGCGCGGG TTG CCCGCACGCAGG CGGTCGCGGTATTTG TERM 1719 2164216 - 2164192 - H 100 -8.6 -5.54264 | gap 1, overlap 2164213 AAAGATTCAAAAAAA CGGC-TGCATC CCAG GACGCAAGCCG TTCACCCGAAGTTCA Ajs_2054 2164377 - 2165402 + | LacI family transcription regulator TERM 1720 2165544 - 2165560 + T 84 -10.8 -4.11484 | opp_overlap 2165544 GCCAGACACAAAAAA GCCCGG CATTA CCGGGC TTTTGCAGGCTTGGC TERM 1721 2165560 - 2165544 - T 100 -11.5 -5.4251 | opp_overlap 2165544 GCCAGACACAAAAAA GCCCGGC ATT ACCGGGC TTTTGCAGGCTTGGC Ajs_2055 2166125 - 2165586 - | OmpA/MotB domain-containing protein Ajs_2056 2166188 - 2166781 + | ChaC family protein Ajs_2057 2166815 - 2167342 + | superoxide dismutase, copper/zinc binding TERM 1722 2167350 - 2167394 + F 71 -11.4 -3.48292 | overlap 2167348 GTCGCTGATCGTGCA GGGCTG-GGCGCCCTGCGGGCA CAA TCCCCGCATGA-GCCACAGCCC TCTTTCCTCCTCCAT Ajs_2058 2167381 - 2168034 + | pyridoxamine 5'-phosphate oxidase Ajs_2059 2169107 - 2168079 - | auxin efflux carrier TERM 1723 2169153 - 2169121 - H 77 -13.4 -3.27297 | overlap 2169119 ACTCATGAATTAATA GCTGCCAGCGCTTG ATGGA CAAGCGCTGGAGGC CGAAAACGCCCTAAA Ajs_2060 2169267 - 2170322 + | tRNA-dihydrouridine synthase A Ajs_2061 2173014 - 2170312 - | diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(s) TERM 1724 2170648 - 2170615 - G 72 -7.3 -4.19817 | gap 1, opp_overlap 2170619 2170644 GTCATCGATGGAAAA GCGCACGCCCAGCGCC ACC AGCTC-GTGCATGCGC CGGGCGGTGTCCTGC TERM 1725 2170956 - 2170912 - G 72 -13.6 -3.15544 | gap 2, overlap 2170930 CGCCACCGGGATGAA CTGCGCCGGCGGCA-C-GAAGC CGC GCTGCGGATGCGGCCAGCGCAG CAGCAGCTCCGCGCC Ajs_2062 2173184 - 2174254 + | RelA/SpoT domain-containing protein TERM 1726 2174693 - 2174705 + G 75 -9.1 -4.07568 | GTTCTGCGAACTGCG CCGCT TCA AGCGG TTTTCGGACGACCCG Ajs_2063 2174424 - 2175731 + | polyhydroxyalkanoate depolymerase, intracellular TERM 1727 2176178 - 2176156 - g 89 -11.2 -4.18494 | overlap 2176157 CATCCGCATGGAAAA TGCCAGCGGC CAG GCCACTGGCT GGGCCGCATGGTCCG TERM 1728 2176177 - 2176157 - g 76 -14.7 -3.10775 | overlap 2176156 ATCCGCATGGAAAAT GCCAGCGGC CAG GCCACTGGC TGGGCCGCATGGTCC Ajs_2064 2175740 - 2176393 + | electron transport complex, RnfABCDGE type, B subunit Ajs_2065 2178140 - 2176476 - | methyl-accepting chemotaxis sensory transducer TERM 1729 2178204 - 2178214 + G 79 -6.8 -4.57569 | CTATCCGTTCGAGCG GCTG CGA CAGC TTTTTGCGGGGGTGA TERM 1730 2179120 - 2179130 + G 70 -8.2 -3.95073 | overlap 2179117 ATGGACGTGCGCCTG CCCG ACG CGGG TTTCTACCTCTGGGC Ajs_2066 2178160 - 2179374 + | hypothetical protein dapD 2179371 - 2180195 + | 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase TERM 1731 2181328 - 2181304 - g 85 -14.3 -4.07568 | GTGGCGCCTGCAAAA CGACTTCTCGG CTG CCGCGAAGTCG GCGCGCGCCGTCAAC Ajs_2068 2180252 - 2181415 + | twitching motility protein Ajs_2069 2181459 - 2182634 + | succinyl-diaminopimelate desuccinylase Ajs_2070 2182631 - 2183560 + | N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase TERM 1732 2185245 - 2185218 - g 70 -11.2 -3.62096 | CTTGAGGAGTCCAAA CGCCTGCGCGAA CTGG CCCGCGCAGCCG AGCAGGTGGTCGTTG Ajs_2071 2183607 - 2185577 + | ABC transporter related TERM 1733 2185967 - 2185986 + T 91 -12.2 -4.35524 | opp_overlap 2185967 GGTGGAGACAAAAAA GGAACGTG CTGC CACGTTCC TTTTGCATTTCAAGG TERM 1734 2185986 - 2185967 - T 100 -12.2 -5.36441 | opp_overlap 2185967 GGTGGAGACAAAAAA GGAACGTG CTGC CACGTTCC TTTTGCATTTCAAGG fabG 2186763 - 2186026 - | 3-ketoacyl-(acyl-carrier-protein) reductase TERM 1735 2186942 - 2186967 + r 100 -18.3 -4.65895 | opp_overlap 2186942 TGCGCCGACAAAAAA GGCCGTACGGG CTTC CCCGTGCGGCC TTTTTGCATGCAGGG TERM 1736 2186967 - 2186942 - R 100 -16.1 -5.24129 | opp_overlap 2186942 TGCGCCGACAAAAAA GGCCGTACGGG CTTC CCCGTGCGGCC TTTTTGCATGCAGGG Ajs_2073 2188187 - 2187009 - | acetyl-CoA acetyltransferase TERM 1737 2187500 - 2187517 + g 72 -6.9 -4.19506 | CGGGGCGCAGGCCAG CCAGAGC TTCG GCACTGG TTTTGCGGTTGAGAT Ajs_2074 2190128 - 2188329 - | poly(R)-hydroxyalkanoic acid synthase, class I TERM 1738 2188530 - 2188548 + g 100 -16 -5.06414 | CAGTTGCCCATCCTC GCGCAGCC AGT GGCTGCGC TTTTTCTTGGCGGGC Ajs_2076 2191235 - 2190408 - | hypothetical protein Ajs_2075 2190201 - 2190491 + | hypothetical protein Ajs_2077 2191933 - 2191265 - | maleylacetoacetate isomerase Ajs_2078 2192052 - 2192747 + | fumarylacetoacetate (FAA) hydrolase TERM 1739 2192799 - 2192764 - f 82 -6.2 -4.93296 | gap 1, opp_overlap 2192764 2192765 2192766, overlap 2192766 TCACTATCATAAAAA TAGCTGCTAGCGCTT TCCCCAT AAGCGCT-GCAGCCG TTTTTTATTCATACA TERM 1740 2192764 - 2192799 + F 100 -6.2 -5.5112 | gap 1, opp_overlap 2192764 2192766, overlap 2192765 2192766 TCACTATCATAAAAA TAGCTGCTAGCGCTT TCCCCAT AAGCGCT-GCAGCCG TTTTTTATTCATACA TERM 1741 2192797 - 2192766 - f 82 -11 -4.08644 | gap 1, opp_overlap 2192765 2192764 2192766, overlap 2192764 ACTATCATAAAAATA GCTGCTAGCGCTT TCCCCAT AAGCGCT-GCAGC CGTTTTTTATTCATA Ajs_2079 2192819 - 2193367 + | NUDIX hydrolase Ajs_2080 2194562 - 2193360 - | major facilitator superfamily transporter Ajs_2081 2197118 - 2194578 - | glycosyl transferase family protein TERM 1742 2197261 - 2197288 + r 74 -9.1 -3.86015 | gap 1, opp_overlap 2197229 2197232 2197231, overlap 2197231 2197229 GTCGCCGCACCAGCC GCGGCGCCTGGC GACGG GCCGGGC-CTGC TTTATACCGCCAATC Ajs_2082 2198315 - 2197365 - | patatin Ajs_2083 2200511 - 2198316 - | DNA ligase, NAD-dependent TERM 1743 2198838 - 2198820 - G 85 -10.2 -4.19624 | opp_overlap 2198820 2198815 2198828 CAGGCCGAAGAGAAA GCGCGCCA GCG TGGTGCGC TTGGATTTGTCGAGC TERM 1744 2198820 - 2198838 + g 71 -12.4 -3.32997 | opp_overlap 2198820, overlap 2198815 2198828 CAGGCCGAAGAGAAA GCGCGCCA GCG TGGTGCGC TTGGATTTGTCGAGC Ajs_2084 2200897 - 2200523 - | hypothetical protein TERM 1745 2200938 - 2200917 - R 71 -12.9 -3.05844 | opp_overlap 2200909 TTTCCTAGCTGAACA GGCGCCGCG CCAG CGCGGAGCC GGCTGAGAGTTCGCG Ajs_2085 2202048 - 2200906 - | ZipA, C-terminal FtsZ-binding region Ajs_2086 2205586 - 2202062 - | chromosome segregation protein SMC TERM 1746 2202935 - 2202961 + g 77 -5.7 -4.60041 | overlap 2202937 2202938 CGCCGTCAGGTCGTC GTACTGGCTGC GCTGG GCGGCCAGGTC TTTTTCGCGCTCGAT TERM 1747 2203647 - 2203635 - G 75 -3.3 -4.82901 | overlap 2203636 2203637 TCCTGCGCATAAAAA CTCAC GCT GTGCG CGCCCACGGCATGGC TERM 1748 2204125 - 2204139 + g 71 -9.2 -3.84246 | GCCGCGCGGACAGGT CGGCCT GCC GGGCCG TTTCCTGGTTCACGA TERM 1749 2204826 - 2204862 + g 77 -12.9 -3.57144 | TCCAGGTCGTTCACG GCGGCCAGGCCCTCG GTGCGCA CGCGGGCCTGTTCGC TTTCCGCCTCGGCGC TERM 1750 2205734 - 2205698 - R 75 -3.6 -4.87291 | overlap 2205700 GATTGCAAGCAAAAA TGGCCTCCAGCGCTTA TCCAG CAAGCGCCAGCAGCTA TTCTTACGAGAGCAT Ajs_2087 2206093 - 2205761 - | hypothetical protein TERM 1751 2205998 - 2205956 - G 83 -14.8 -3.67296 | GAGCAGCCAGGCAAA CAGCGCCAGGCTGGCGGC CGCCGGC ACCAGCAGCCAGGCGCTG CGCCCCTGGCGCAGC TERM 1752 2206174 - 2206118 - R 100 -14.4 -4.21812 | gap 2, overlap 2206115 CGTGATGGAAAAGAA GGCCGCGGCGATC-AGACGCCGGC-CCG CTT CAGCACCAAGGCCTCGAACGCCGCGGCC TGCAGCGGTGGGCTG Ajs_2088 2209272 - 2206129 - | diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(s) TERM 1753 2206246 - 2206234 - G 74 -10.5 -3.85698 | GTTGCGCTCCAGAAA GGCGC GCT GCGCC TCGGTCTCAACGCCC TERM 1754 2206951 - 2206936 - G 73 -3.9 -4.65895 | overlap 2206938 CTGTGGATCGAAAAA GCGCA GCGTAT CGCGC CCGGCGGCCTTGGCC TERM 1755 2207933 - 2207959 + g 74 -7.9 -4.19258 | overlap 2207934 AGGTCCACCCACACC TCGCTGCCGTC CTTGC GGCGGTAGCGC TTTTCCATGCGGTAT Ajs_2089 2209472 - 2211313 + | ABC transporter related Ajs_2090 2212870 - 2211434 - | major facilitator superfamily transporter TERM 1756 2212079 - 2212037 - G 70 -6.3 -4.17762 | CAGCCGCGAAAACAA GTTGCCCAGCAGC-CCCACGC GCA GCGTGCGCACCGC-GAACAAC CCCGGCACAAACAGC TERM 1757 2213570 - 2213516 - g 95 -5.8 -5.28176 | gap 3, opp_overlap 2213525 2213558, overlap 2213518 2213519 GTCATCGACAAAAAA GACCTGCA-GCCCGGCGACCTGGTGTT CTTC AACACCATG-CGCCGCGCGTTCAG-CC ACGTAGGCATCTACG TERM 1758 2213569 - 2213518 - g 72 -7.3 -4.2748 | opp_overlap 2213525 2213558, overlap 2213516 2213519 CATCGACAAAAAAGA CCTGCA-GCCCGGCGACCTGGTGTT CTTC AACACCATG-CGCCGCGCGTTCAGC CACGTAGGCATCTAC Ajs_2091 2213174 - 2213752 + | NLP/P60 protein Ajs_2092 2213887 - 2214366 + | hypothetical protein Ajs_2093 2215446 - 2214559 - | 6-phosphogluconate dehydrogenase, NAD-binding Ajs_2094 2216469 - 2215510 - | hypothetical protein TERM 1759 2216510 - 2216497 - H 73 -6.7 -4.27026 | GCGCAAAGAAAAACA GGCAT CAAA ATGCC CTCTAACGCAGATTG TERM 1760 2216528 - 2216546 + H 73 -3 -4.78752 | CTAACGCAGATTGTG CCAGCGCT AAC AGCTATGG TTTTTACGTTATCGT Ajs_2095 2216595 - 2216909 + | hypothetical protein TERM 1761 2216985 - 2216953 - T 80 -5.6 -4.70659 | gap 2, overlap 2216954 2216976 CTTCATACTCAAAAA CGCCTCCAGCTCTTGC ACA GCAAGCGCC--AGGCG CTATCAAAAGCATAA TERM 1762 2217005 - 2217021 + T 100 -13.7 -5.14563 | opp_overlap 2217005 CAAAAGCATAAAAAA GGCAGCC AGA GGCTGCC TTTTTTGCTACGGCC TERM 1763 2217021 - 2217005 - T 100 -13.7 -5.4588 | opp_overlap 2217005 CAAAAGCATAAAAAA GGCAGCC AGA GGCTGCC TTTTTTGCTACGGCC Ajs_2096 2218894 - 2217044 - | dihydrolipoamide dehydrogenase TERM 1764 2218070 - 2218097 + g 74 -2.6 -4.72986 | overlap 2218061 2218067 2218072 CTGGCTGCCAGCGGC GATGATGGCCTT CTTG AACGCCACCACC TTTTTGCTGCCGGTC TERM 1765 2218229 - 2218247 + g 72 -4.5 -4.48987 | CTGCGCCAGCCCGCC GGTCAGC TTGCC GATGACC TTTTCCTTGTGGCCG Ajs_2098 2220113 - 2219061 - | alcohol dehydrogenase Ajs_2099 2221142 - 2220252 - | putative signal peptide Ajs_2100 2221988 - 2221236 - | short-chain dehydrogenase/reductase SDR TERM 1766 2221584 - 2221595 + g 79 -7.2 -4.65895 | opp_overlap 2221571, overlap 2221580 CACGTTGACGATGGT GCCG CCAC CGGC TTTTTGCATCAGCGG TERM 1767 2221829 - 2221815 - G 71 -3.4 -4.60041 | opp_overlap 2221815, overlap 2221817 ATCCAGCTCCAAAAA GTCGGC CTT GCCACC GTTTTTGCGGATGCT TERM 1768 2222438 - 2222468 + G 70 -6.6 -4.21908 | CAAGACCTCGCAGGC GCCGGTGCCGTGGG CGG CCAAGGGCTCAGGC TTTTCGATGCTGATG Ajs_2101 2222166 - 2223407 + | transposase, IS204/IS1001/IS1096/IS1165 family protein Ajs_2102 2224919 - 2223366 - | cyclohexanone monooxygenase TERM 1769 2225411 - 2225430 + r 74 -10 -3.72576 | gap 1, overlap 2225411 GAGCCAGCGCCGTTA C-CGCCGCT CTC AGCGGCGAG TTTGGTGCCAGCACA TERM 1770 2225557 - 2225597 + r 76 -10.4 -3.9642 | gap 1 GCACCACGCTTGTCA CTGGTGGGCTCGCTGCGCT GTTT GGCACAGCG-GTACACCAG TTTGCTTCCCTCTTT TERM 1771 2225788 - 2225798 + r 78 -6.8 -4.65168 | CGAGCAACGAAGGCG CGCA GGA TGCG TTTTTGCAGTGTGGT TERM 1772 2226595 - 2226544 - R 93 -17.8 -3.26596 | gap 1, overlap 2226539 TCGAAACCAACTGAA TGCCGGGCCGTGCCGCCCCG-GCGC CTT GCGCGCGCGGCGGCACGGCCAGTGG CTCAGCCCGCGACGC Ajs_2105 2227235 - 2226597 - | hypothetical protein TERM 1773 2227509 - 2227560 + G 71 -12.1 -3.23216 | gap 1, overlap 2227512 GCGCGAGCGCAGCGG CAAGGCCGCGGGCCTGCGCACCCA CATGC TGGTGGCGCTGGGC-GCGGCCCTG TTCGTGCTGGTGCCG Ajs_2106 2227363 - 2227854 + | MgtC/SapB transporter TERM 1774 2227876 - 2227843 - T 93 -7.3 -5.10461 | overlap 2227846 2227848 CGGATCGAAGAAAAA GAAGCGGGGTGAGGG CGGG CCCTCACCGCCCCTG GAACACCGGCTGCCG TERM 1775 2227873 - 2227846 - T 95 -11.2 -4.64495 | overlap 2227843 2227848 ATCGAAGAAAAAGAA GCGGGGTGAGGG CGGG CCCTCACCGCCC CTGGAACACCGGCTG Ajs_2108 2230064 - 2228517 - | putative transposase TERM 1776 2228948 - 2228967 + g 70 -10 -3.72576 | gap 1, overlap 2228948 GAGCCAGCGCCGTTA C-CGCCGCT CTC AGCGGCGAG TTTGGTGCCAGCACA TERM 1777 2229094 - 2229134 + g 77 -10.4 -3.9642 | gap 1 GCACCACGCTTGTCA CTGGTGGGCTCGCTGCGCT GTTT GGCACAGCG-GTACACCAG TTTGCTTCCCTCTTT TERM 1778 2229325 - 2229335 + g 79 -6.8 -4.65168 | CGAGCAACGAAGGCG CGCA GGA TGCG TTTTTGCAGTGTGGT TERM 1779 2230152 - 2230116 - R 100 -18.2 -3.64703 | gap 1, opp_overlap 2230122, overlap 2230119 GTTTGGGTACGCAAA GCACAAGGCCCGAACCG TCGC CAGTTCGGGCCTTGT-C AGGGTAGCTTGGCTG TERM 1780 2230150 - 2230119 - R 93 -21 -2.94144 | opp_overlap 2230122, overlap 2230116 TGGGTACGCAAAGCA CAAGGCCCGAACCG TCGC CAGTTCGGGCCTTG TCAGGGTAGCTTGGC TERM 1781 2230122 - 2230147 + r 82 -14.7 -3.3164 | opp_overlap 2230119 2230116 GTACGCAAAGCACAA GGCCCGAACCG TCGC CAGTTCGGGCC TTGTCAGGGTAGCTT Ajs_2110 2231194 - 2230325 - | O-methyltransferase domain-containing protein TERM 1782 2231699 - 2231741 + r 91 -20.9 -2.53263 | gap 1, opp_overlap 2231705 2231711, overlap 2231704 2231705 2231711 2231730 2231733 TAAGACAGCGCCCGG CGGAAA-GGAAAAGGAGGCC CAGC GGCCTCCTTTTTCGTTTCCG TCACTTGACGGTAAC TERM 1783 2231704 - 2231735 + r 84 -13.8 -3.68619 | opp_overlap 2231705 2231711, overlap 2231699 2231705 2231711 2231730 2231733 CAGCGCCCGGCGGAA AGGAAAAGGAGGCC CAGC GGCCTCCTTTTTCG TTTCCGTCACTTGAC TERM 1784 2231734 - 2231705 - R 85 -15.1 -3.53091 | opp_overlap 2231704 2231699 2231705 2231711 2231730 2231733, overlap 2231711 AGCGCCCGGCGGAAA GGAAAAGGAGGCC CAGC GGCCTCCTTTTTC GTTTCCGTCACTTGA TERM 1785 2231705 - 2231734 + r 84 -17.3 -2.8085 | opp_overlap 2231705 2231711, overlap 2231704 2231699 2231711 2231730 2231733 AGCGCCCGGCGGAAA GGAAAAGGAGGCC CAGC GGCCTCCTTTTTC GTTTCCGTCACTTGA TERM 1786 2231711 - 2231728 + r 100 -12.7 -5.00138 | opp_overlap 2231711 2231705, overlap 2231705 2231704 2231699 CGGCGGAAAGGAAAA GGAGGCC CAGC GGCCTCC TTTTTCGTTTCCGTC TERM 1787 2231728 - 2231711 - R 100 -12.7 -4.54727 | opp_overlap 2231705 2231704 2231699 2231711, overlap 2231705 CGGCGGAAAGGAAAA GGAGGCC CAGC GGCCTCC TTTTTCGTTTCCGTC Ajs_2112 2232179 - 2231742 - | hypothetical protein TERM 1788 2232276 - 2232290 + H 70 -10 -3.59979 | opp_overlap 2232272 2232276 AATCAGGGAAAGGCA TCGCTG GCA CAGCGA TTTCCACTGCGAAGC Ajs_2113 2232370 - 2233242 + | extracellular solute-binding protein TERM 1789 2233261 - 2233294 + F 83 -13.1 -3.92373 | gap 1, overlap 2233263 2233265 CCCGCCCGAACGGGG GAAG-CGGCCGCGTCC GAG GGACGCGGCCGTCGTG TTTGTCGATGGAGTG TERM 1790 2233263 - 2233292 + F 86 -15.7 -3.5511 | gap 1, overlap 2233261 2233265 CGCCCGAACGGGGGA AG-CGGCCGCGTCC GAG GGACGCGGCCGTCG TGTTTGTCGATGGAG TERM 1791 2233265 - 2233289 + F 100 -22.9 -2.90511 | overlap 2233263 2233261 CCCGAACGGGGGAAG CGGCCGCGTCC GAG GGACGCGGCCG TCGTGTTTGTCGATG Ajs_2114 2233314 - 2234006 + | polar amino acid ABC transporter, inner membrane subunit Ajs_2115 2234503 - 2234009 - | hypothetical protein Ajs_2116 2234769 - 2235323 + | hypothetical protein Ajs_2117 2235725 - 2235345 - | proline hydroxylase-like protein TERM 1792 2236217 - 2236236 + r 74 -10 -3.72576 | gap 1, overlap 2236217 GAGCCAGCGCCGTTA C-CGCCGCT CTC AGCGGCGAG TTTGGTGCCAGCACA TERM 1793 2236363 - 2236403 + r 76 -10.4 -3.9642 | gap 1 GCACCACGCTTGTCA CTGGTGGGCTCGCTGCGCT GTTT GGCACAGCG-GTACACCAG TTTGCTTCCCTCTTT TERM 1794 2236594 - 2236604 + r 78 -6.8 -4.65168 | CGAGCAACGAAGGCG CGCA GGA TGCG TTTTTGCAGTGTGGT Ajs_2119 2238427 - 2237225 - | FAD-dependent pyridine nucleotide-disulphide oxidoreductase TERM 1795 2238488 - 2238508 + H 70 -9.8 -3.65812 | opp_overlap 2238488 ATGGCCTTTGAGCAA CTACGACT ATATA AGTCGTAG TTATCTTCGGCAAGG Ajs_2120 2238621 - 2239160 + | BadM/Rrf2 family transcriptional regulator Ajs_2121 2240944 - 2239352 - | putative transposase TERM 1796 2239783 - 2239802 + g 70 -10 -3.72576 | gap 1, overlap 2239783 GAGCCAGCGCCGTTA C-CGCCGCT CTC AGCGGCGAG TTTGGTGCCAGCACA TERM 1797 2239929 - 2239969 + g 77 -10.4 -3.9642 | gap 1 GCACCACGCTTGTCA CTGGTGGGCTCGCTGCGCT GTTT GGCACAGCG-GTACACCAG TTTGCTTCCCTCTTT TERM 1798 2240160 - 2240170 + g 79 -6.8 -4.65168 | CGAGCAACGAAGGCG CGCA GGA TGCG TTTTTGCAGTGTGGT Ajs_2122 2242045 - 2240957 - | transposase, IS4 family protein TERM 1799 2242312 - 2242276 - R 100 -18.2 -3.64703 | gap 1, opp_overlap 2242282, overlap 2242279 GTTTGGGTACGCAAA GCACAAGGCCCGAACCG TCGC CAGTTCGGGCCTTGT-C AGGGTAGCTTGGCTG TERM 1800 2242310 - 2242279 - R 93 -21 -2.94144 | opp_overlap 2242282, overlap 2242276 TGGGTACGCAAAGCA CAAGGCCCGAACCG TCGC CAGTTCGGGCCTTG TCAGGGTAGCTTGGC TERM 1801 2242282 - 2242307 + r 82 -14.7 -3.3164 | opp_overlap 2242279 2242276 GTACGCAAAGCACAA GGCCCGAACCG TCGC CAGTTCGGGCC TTGTCAGGGTAGCTT Ajs_2123 2244216 - 2242333 - | dihydrolipoamide dehydrogenase TERM 1802 2243551 - 2243569 + g 72 -4.5 -4.48987 | CTGCGCCAGCCCGCC GGTCAGC TTGCC GATGACC TTTTCCTTGTGGCCG Ajs_2124 2245936 - 2244233 - | pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase TERM 1803 2245642 - 2245672 + g 85 -8.1 -4.72272 | overlap 2245614 2245637 GCGTTTCGATAGCTG CCGGCGCTTGTGC GGCGG GCGCTGGAGCCGG TTTTTCATCAGAAGC aceE 2248652 - 2245956 - | pyruvate dehydrogenase subunit E1 TERM 1804 2248113 - 2248137 + g 72 -8.6 -4.12456 | gap 1, overlap 2248128 2248131 GTAGCTCGACAAGCC CTTGCCGCCGG TCTC CTGGCGG-AAG TTTTCCAGCTGGTCT TERM 1805 2248713 - 2248731 + H 80 -4.6 -4.87807 | opp_overlap 2248727, overlap 2248714 2248727 GTTTCGCACAAATTT TCATCATT TCA AATGATGC TTTTTCATCTCTTAA Ajs_2126 2248822 - 2251368 + | multi-sensor signal transduction histidine kinase TERM 1806 2251418 - 2251386 - g 81 -3.9 -5.03314 | overlap 2251390 2251416 TTGATTCCGAAAAAA GGCACCGTCTATGTC GTC GACGACGACGAAGCC GTCCGCGACTCGCTC Ajs_2127 2251365 - 2251991 + | two component LuxR family transcriptional regulator TERM 1807 2252009 - 2252042 + F 78 -3.1 -5.07011 | gap 1, opp_overlap 2252009, overlap 2252010 GCTCCGTTTTTAATA GCTGCCT-GCGCAT ACCAGAC AAGCGCCAGGCAGA TTTTTCATTTGTATC Ajs_2128 2252070 - 2252918 + | methenyltetrahydrofolate cyclohydrolase TERM 1808 2253509 - 2253488 - g 77 -5.8 -4.64676 | overlap 2253500 2253501 CGAGTTGCAACAAAA GTTCAGCG AGAACG CGCTGGAC GCCACCGACGCCTAC TERM 1809 2253890 - 2253914 + G 74 -12.7 -3.53012 | CATCCACTTCCTGCG GGACCTGGCGC ACC GCGCCCGGCCC TTTGCGGAGAAGGAC Ajs_2129 2253006 - 2255039 + | oligopeptidase A Ajs_2130 2255154 - 2255810 + | glutaredoxin Ajs_2131 2256550 - 2255861 - | ribose-5-phosphate isomerase A TERM 1810 2256211 - 2256197 - G 75 -9.2 -4.0641 | opp_overlap 2256201, overlap 2256198 CGCTATGCACACAAA GCGCCG TGC CAGCGC GGCGACGATCTTCTC Ajs_2132 2256586 - 2257641 + | dihydroorotate dehydrogenase 2 TERM 1811 2257674 - 2257660 - T 100 -12.8 -5.4505 | overlap 2257647 CGGGCCAAGAAAAAA GGCCGC GAT GCGGCC TGATAGAGACTGTGG Ajs_2133 2258022 - 2257699 - | hypothetical protein Ajs_2134 2258414 - 2258019 - | hypothetical protein Ajs_2135 2258862 - 2258482 - | protein of unknown function DUF883, ElaB Ajs_2136 2260036 - 2258921 - | FAD dependent oxidoreductase Ajs_2137 2261130 - 2260054 - | histone deacetylase superfamily protein TERM 1812 2260553 - 2260512 - G 72 -13.7 -3.0464 | gap 1, opp_overlap 2260525 2260526 AATCCACGTCCAACA CGGCCACACGGGCTGCGC CGTGGTC GCGCAGCCATTG-GGCCG CCACGGCCGCGTTGT TERM 1813 2260669 - 2260636 - G 86 -17.3 -3.28712 | opp_overlap 2260656 2260657 2260659 GCGTGTGCTGCAGAA CGCGGCGCGCTCGCC AGCC GCCAGGCGCGCCGCG GCACTGGCCGCCGCG TERM 1814 2260656 - 2260695 + g 77 -12.8 -3.65902 | gap 1, opp_overlap 2260636, overlap 2260657 2260659 CGCGCTCGCCAGCCG CCAGGCG-CGCCGCGGC ACTGGCC GCCGCGTCGGCGCCTGC TTTGGCTGCCGTCCA TERM 1815 2260657 - 2260694 + g 77 -16.3 -2.79327 | gap 1, opp_overlap 2260636, overlap 2260656 2260659 GCGCTCGCCAGCCGC CAGGCG-CGCCGCGGC ACTGGCC GCCGCGTCGGCGCCTG CTTTGGCTGCCGTCC TERM 1816 2261200 - 2261172 - R 100 -16.7 -5.45652 | opp_overlap 2261167 2261166 AGCGCCAAGAAAAAA CCCCTTGCGGCCA TAC CGGCTGCAAGGGG TTCGGATTGGTGGGT Ajs_2138 2262151 - 2261438 - | DNA polymerase III, epsilon subunit TERM 1817 2261615 - 2261648 + g 71 -12.5 -3.26471 | gap 1 GGCGGTGGCCTCATC CATGATCAGCAGGGCA TCC TGCCC-GCGGGTCATG TTGATGTAGACATCC Ajs_2139 2262489 - 2262151 - | ferredoxin, 2Fe-2S type, ISC system hscA 2264391 - 2262523 - | chaperone protein HscA TERM 1818 2264436 - 2264409 - R 78 -10.4 -4.10429 | AATGAGTGTGGAAAA GCCGGGGCCCGC AAGC GCACGCCCAGGC AGGAGTGACCGAATA Ajs_2141 2264976 - 2264458 - | co-chaperone Hsc20 TERM 1819 2265015 - 2264991 - R 100 -12.8 -6.09888 | opp_overlap 2264991 TGGCAATAAAAAAAA CCGCCAGCGC GGCGG GCGATGGCGG TCCTGTGCAATAAGC Ajs_2142 2265368 - 2265045 - | iron-sulfur cluster assembly protein IscA Ajs_2143 2265775 - 2265374 - | FeS cluster assembly scaffold IscU Ajs_2144 2267033 - 2265813 - | cysteine desulfurase IscS Ajs_2145 2267674 - 2267138 - | BadM/Rrf2 family transcriptional regulator TERM 1820 2267475 - 2267457 - G 77 -16 -3.05844 | TCTGCCACGGTAATA TCGCCCGC CTT GCGGGCGA GCGTATAACCGCCGC TERM 1821 2268299 - 2268277 - H 74 -12.7 -3.32402 | gap 1, opp_overlap 2268283, overlap 2268275 2268273 2268278 CCCACATTAAAGAGA GCC-GCCGGG CTTG CCCGGCAGGC CGTTGGTCGGCGGCA Ajs_2147 2268368 - 2269594 + | transposase IS116/IS110/IS902 family protein Ajs_2148 2270929 - 2269703 - | transposase, IS204/IS1001/IS1096/IS1165 family protein TERM 1822 2269810 - 2269826 + g 73 -13.7 -3.13164 | GCGCGCGACGCTTGG CGGCCTG GAA CAGGCCG TTGAGTGCTTCGAGG TERM 1823 2270993 - 2270936 - R 71 -13.7 -2.5655 | gap 3, overlap 2270935 GTCATGCATACCAAT CGCTCCTGCTCGTCATGGCCGATGCG TGAGCATGC CGCATCGGCCATGACG-GCC--AGCG TACGGGCCGGCAGCC Ajs_2149 2272013 - 2270922 - | putative transposase Ajs_2150 2274232 - 2272136 - | excinuclease ABC subunit B TERM 1824 2272412 - 2272378 - G 71 -9.3 -3.85698 | CCTTCTCGCTATAAA CGCCGTCAATCAGGT CTCGC ACCTGCTTGACGATG CTGCGCGGCGTAATA Ajs_2151 2274341 - 2275537 + | aromatic amino acid aminotransferase TERM 1825 2275556 - 2275571 + F 100 -11.8 -6.09133 | opp_overlap 2275556 TCACGTGCACAAAAA CCGCCC TCCC GGGCGG TTTTTTTTTGGCATA TERM 1826 2275571 - 2275556 - f 100 -11.8 -4.84359 | opp_overlap 2275556 TCACGTGCACAAAAA CCGCCC TCCC GGGCGG TTTTTTTTTGGCATA TERM 1827 2275826 - 2275802 - g 72 -8.5 -4.05877 | GACCAGACCAAAGAA GGCCTGCGCAC CGT GTACGAAGACC GTGCCGTGCCCCTGG TERM 1828 2277170 - 2277156 - g 75 -11.4 -3.72893 | opp_overlap 2277168, overlap 2277157 CACTGGTCGAGGAAA TGGCCG CCG CGGCCA GCAGCCTGCGCAGCC Ajs_2152 2275691 - 2277460 + | methyl-accepting chemotaxis sensory transducer Ajs_2153 2277463 - 2278341 + | L-carnitine dehydratase/bile acid-inducible protein F TERM 1829 2278403 - 2278387 - g 85 -7.9 -4.84359 | overlap 2278389 GGATGGCGACAAAAA CCCGCGC ACC ACGCAGG TGCGGCCCCGGTCTG TERM 1830 2278603 - 2278590 - g 77 -8.1 -4.37092 | overlap 2278592 ATGTCCTCGACAAAA GCGCT GCCC AGCGC GGCGCCTGGCGCACC TERM 1831 2278792 - 2278802 + G 83 -4.6 -5.05153 | overlap 2278773 GCGGCCGCAGACGCT GCGC GAA GTGC TTTCTTTTTTGGGGT Ajs_2154 2278349 - 2278843 + | hypothetical protein TERM 1832 2279688 - 2279700 + F 91 -9.1 -4.63932 | opp_overlap 2279684 ATCCACAGCAAGCTG GCTGG TCT CCAGC TTTTCTTGGCGGATG Ajs_2156 2281797 - 2283050 + | transposase, mutator type TERM 1833 2283179 - 2283138 - f 72 -4.4 -4.56597 | gap 1, opp_overlap 2283139, overlap 2283139 2283142 GGGCGGCCGCAAAAA CTGAGTGCAACACCTGACC TTTCC GGTACGGTGTTGC-CCCAT GTCCTATTCCGAACT Ajs_2157 2283178 - 2284206 + | integrase catalytic subunit Ajs_2158 2284331 - 2284963 + | hypothetical protein Ajs_2159 2285016 - 2285273 + | hypothetical protein TERM 1834 2285563 - 2285576 + G 75 -3.1 -4.82901 | overlap 2285561 GTCGGCGTCGGAACA GGTAA GAAC TTGCC TTTTTATCCCGCCGA Ajs_2160 2285407 - 2286117 + | methyltransferase type 11 TERM 1835 2286573 - 2286558 - g 73 -4 -4.66833 | gap 1, overlap 2286560 CGGCAACCGCAAAAA CATCCTG TTT CAGGA-G CAACTCGCGCAGACC TERM 1836 2287030 - 2287054 + G 77 -3.3 -4.85599 | overlap 2287032 GAGGAGATCCGGCAG CGGCTACGGGC TAA GCGCGCGGCGG TTTTTCTCGACTACG Ajs_2161 2286208 - 2287785 + | beta-phosphoglucomutase family hydrolase Ajs_2162 2287782 - 2290205 + | trehalose 6-phosphate phosphorylase Ajs_2163 2290268 - 2291281 + | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding Ajs_2164 2291290 - 2293728 + | phosphoenolpyruvate synthase Ajs_2165 2293773 - 2294813 + | glyceraldehyde-3-phosphate dehydrogenase TERM 1837 2296491 - 2296503 + G 75 -9.1 -4.07568 | opp_overlap 2296465 2296490 CAGATGGGATCGAAC GCAGC CTG GCTGC TTTTCAACGCGGGGA Ajs_2168 2296121 - 2296687 + | TetR family transcriptional regulator Ajs_2169 2297501 - 2296764 - | LysR family transcriptional regulator Ajs_2170 2297676 - 2298293 + | hypothetical protein Ajs_2171 2298290 - 2299960 + | integrase catalytic subunit Ajs_2172 2299957 - 2300853 + | TniB family protein Ajs_2173 2300850 - 2302343 + | hypothetical protein Ajs_2174 2302481 - 2302780 + | XRE family transcriptional regulator Ajs_2175 2304651 - 2302807 - | relaxase TERM 1838 2304540 - 2304573 + g 77 -12.3 -3.64236 | overlap 2304532 2304542 GGCGCGGCGTGGCCA GCAGCGATGCGGCCG ACTC CGGCCGCATCGACCC TTTCGGAGTTTCGAT Ajs_2176 2305774 - 2304854 - | hypothetical protein Ajs_2177 2306594 - 2305767 - | hypothetical protein Ajs_2178 2306755 - 2307123 + | hypothetical protein Ajs_2179 2308663 - 2307140 - | hypothetical protein Ajs_2180 2309032 - 2308679 - | hypothetical protein TERM 1839 2308912 - 2308859 - G 71 -9.4 -3.77588 | gap 1, opp_overlap 2308899 ACGCCACACGAAGAA GTGGCCGGCGTGCGCCTGCAGCCAG TGCTG CCAGCCCTCGACGC-CGCCGACCAC GTGGATGCCGGCGAT Ajs_2181 2310435 - 2309029 - | hypothetical protein Ajs_2182 2311390 - 2310446 - | hypothetical protein Ajs_2183 2311836 - 2311387 - | hypothetical protein TERM 1840 2311970 - 2311952 - R 100 -16 -4.05788 | GTCGGCGAAAGGAAA CGGGAGCC AAG GGCTCCCG TGGTGATGACATGAA Ajs_2184 2312499 - 2312005 - | DNA repair protein RadC Ajs_2185 2313438 - 2312695 - | hypothetical protein Ajs_2186 2316340 - 2313452 - | hypothetical protein TERM 1841 2314326 - 2314342 + g 79 -11.5 -3.86981 | ATCAGGCTGCGGTCG GCGCGCG TCA TGCGCGC TTCTTCCTTGTCCTC TERM 1842 2316218 - 2316160 - G 71 -13.8 -2.89564 | gap 3 GCGCGACGCCATAGA GCGCATCGTGGTCGGCCTGGGTGGCCGGC CTGC GCCGGCC-CC--GGCCGAGCGCGCTGCCC GGCTCGGCGACACCC Ajs_2187 2316774 - 2316340 - | hypothetical protein TERM 1843 2316670 - 2316694 + g 74 -12.1 -3.54743 | CCAGATGTCGAGCAT GGTGCTGTCGC CGT GCGGCAGCAGC TTCTCCTTGCTGGTG Ajs_2188 2318188 - 2316755 - | hypothetical protein Ajs_2189 2319092 - 2318178 - | hypothetical protein Ajs_2190 2319781 - 2319089 - | hypothetical protein TERM 1844 2319630 - 2319583 - G 72 -14.1 -2.96979 | gap 1, opp_overlap 2319599, overlap 2319569 2319575 ACGAGAAGGCATACA CGCTCTCGGGCGGCACGTCCCA CCACT TGCG-CGTGCTGCCCGAGCGCA AGTCCGGCGGCACAT Ajs_2191 2320188 - 2319778 - | hypothetical protein Ajs_2192 2320569 - 2320201 - | hypothetical protein Ajs_2193 2320831 - 2320592 - | hypothetical protein Ajs_2194 2321187 - 2320828 - | hypothetical protein Ajs_2195 2321480 - 2321692 + | phage transcriptional regulator, AlpA Ajs_2196 2321702 - 2322802 + | DNA-cytosine methyltransferase Ajs_2197 2322823 - 2323281 + | putative very short patch repair protein Ajs_2198 2323302 - 2326442 + | helicase domain-containing protein TERM 1845 2328784 - 2328815 + G 81 -10.8 -4.15044 | opp_overlap 2328769, overlap 2328771 GCTCGACGTGCCGGA GCGCATCGCCGATG CGTT CATCGCCGAAGTGC TTTCTTCGGGAGGGA Ajs_2199 2326439 - 2328979 + | hypothetical protein Ajs_2200 2330218 - 2328992 - | transposase, IS204/IS1001/IS1096/IS1165 family protein TERM 1846 2329099 - 2329115 + g 73 -13.7 -3.13164 | GCGCGCGACGCTTGG CGGCCTG GAA CAGGCCG TTGAGTGCTTCGAGG TERM 1847 2330282 - 2330225 - H 71 -13.7 -2.5655 | gap 3, overlap 2330224 GTCATGCATACCAAT CGCTCCTGCTCGTCATGGCCGATGCG TGAGCATGC CGCATCGGCCATGACG-GCC--AGCG TACGGGCCGGCAGCC TERM 1848 2331887 - 2331874 - g 72 -4.5 -4.51812 | GTCCACAACAACAAA GTCCA AGCG CGGAC GCAGACCGAAGGCGG Ajs_2201 2330411 - 2331949 + | hypothetical protein TERM 1849 2332472 - 2332509 + G 74 -12.7 -3.61902 | gap 1, overlap 2332457 GCCAGCGGCTCGGTC GTGGTGCGCT-GGCTCTT CGC AAGCGCCTGGCGCGCCGC TTCTCTGTGATCGGG Ajs_2202 2331946 - 2333901 + | DNA mismatch repair ATPase-like protein TERM 1850 2334636 - 2334663 + G 70 -6.2 -4.19817 | GGCCAGCAATCAGTC GCTGGTGCCGAG TAGC CTCGGCATGACC TTTTGCGTGGATGGC Ajs_2203 2333914 - 2337933 + | helicase domain-containing protein Ajs_2204 2337936 - 2339795 + | hypothetical protein Ajs_2205 2339797 - 2340558 + | phospholipase D/transphosphatidylase Ajs_2206 2341302 - 2340610 - | hypothetical protein TERM 1851 2340796 - 2340831 + g 73 -3.8 -4.68593 | opp_overlap 2340794, overlap 2340799 TTCCGGCCAGACATC GAACGCGTCGTCATCG CTTT CGAATGCGGTGCGCTC TTTTTCCGTCATGAG Ajs_2207 2342334 - 2341585 - | hypothetical protein Ajs_2208 2344487 - 2342331 - | hypothetical protein Ajs_2209 2345029 - 2344496 - | hypothetical protein Ajs_2210 2345646 - 2345026 - | lytic transglycosylase, catalytic Ajs_2211 2346350 - 2345631 - | putative secreted protein TERM 1852 2345948 - 2345898 - G 78 -15.9 -3.14132 | opp_overlap 2345904 GTCGGCCTTGACGAA GACGGCCAGGCGCCCGGAGCCGG TGTTG CCGGCACCCTGCGCCTTGGCGCC GGGCAGGCTCACGCG Ajs_2212 2347084 - 2346437 - | hypothetical protein Ajs_2213 2347692 - 2347081 - | hypothetical protein TERM 1853 2348343 - 2348328 - g 89 -5.4 -5.252 | overlap 2348329 2348335 2348336 GACCCGGAGAAAAAA TGACGA ATCG TCGCCA AGGCGGCGCCATGGA Ajs_2214 2348050 - 2348361 + | hypothetical protein Ajs_2215 2348354 - 2349265 + | hypothetical protein Ajs_2216 2349262 - 2349507 + | hypothetical protein Ajs_2217 2349504 - 2351267 + | hypothetical protein Ajs_2218 2351304 - 2353832 + | TPR repeat-containing protein Ajs_2219 2355448 - 2354027 - | RNA-directed DNA polymerase TERM 1854 2355903 - 2355884 - R 100 -16.4 -4.71426 | GGCGCACCAAGAAAA GCGGCCCC CGAA GGGGCCGC CAAGTCCAGCACCGC Ajs_2220 2358189 - 2355919 - | helicase domain-containing protein TERM 1855 2358248 - 2358208 - R 100 -25.5 -3.2614 | overlap 2358209 GATGCTCCAGAGCAA TGGGGCATGTCACCTCCCC CAC GGGGCGGTGACATGCCCCT GGGTGGGAAGAAAGA TERM 1856 2358247 - 2358209 - R 100 -29 -2.5547 | overlap 2358208 ATGCTCCAGAGCAAT GGGGCATGTCACCTCCCC CAC GGGGCGGTGACATGCCCC TGGGTGGGAAGAAAG Ajs_2221 2358606 - 2358301 - | hypothetical protein TERM 1857 2358664 - 2358630 - R 100 -17.8 -3.61398 | overlap 2358661 CTCCTTCTGGAAGAA GGGGCCACGGCACCCC ATC GGGGCGACATGACCCC GGTGGGTGGATGAAA Ajs_2222 2359817 - 2358708 - | hypothetical protein Ajs_2223 2360533 - 2359883 - | hypothetical protein TERM 1858 2360591 - 2360557 - R 77 -12.8 -3.66908 | opp_overlap 2360573 CCTCTTGAAAATGAA GGAGCAACCACAGCCC GCG GGGCCATGCTCGCCCC GGTTGGGTGGAAGGA Ajs_2224 2360984 - 2360619 - | hypothetical protein TERM 1859 2361041 - 2361004 - R 89 -13.3 -4.15044 | overlap 2361005 2361033 2361034 GTCTCCTTGAAGAAA TGGCCGGAGCCCTCCCC GTCG GGGGAGAACCCCGGCGG GTGGCGGAATGCCGC TERM 1860 2361040 - 2361005 - R 84 -16.8 -3.08812 | overlap 2361004 2361033 2361034 TCTCCTTGAAGAAAT GGCCGGAGCCCTCCCC GTCG GGGGAGAACCCCGGCG GGTGGCGGAATGCCG Ajs_2225 2361685 - 2361074 - | hypothetical protein TERM 1861 2361736 - 2361713 - R 72 -13.9 -2.7535 | overlap 2361716 CGGGCGAAGAGAGGA CAAGGCCCC GAGGAT GGGGCCTTG CGGATCAGAACGACT Ajs_2226 2362292 - 2361741 - | hypothetical protein TERM 1862 2362626 - 2362604 - R 81 -10.4 -4.15222 | overlap 2362606 ATTGCCGGGAAGAAA GAGGCCCCCG GAG CGGGGGCCAG GGATGGGCGGTCAGT TERM 1863 2362624 - 2362606 - R 100 -17.4 -3.6761 | overlap 2362604 TGCCGGGAAGAAAGA GGCCCCCG GAG CGGGGGCC AGGGATGGGCGGTCA Ajs_2227 2363002 - 2362637 - | hypothetical protein TERM 1864 2363060 - 2363030 - R 95 -12.5 -4.2558 | opp_overlap 2363033, overlap 2363032 2363033 CAGGGGGCAGGAAAA GAGGCTTCCCGCC GCGAG GGCGGGAAGCTGC TGTGAGATCAGTGCC TERM 1865 2363058 - 2363032 - R 84 -13.7 -3.73042 | opp_overlap 2363033, overlap 2363030 2363033 GGGGGCAGGAAAAGA GGCTTCCCGCC GCGAG GGCGGGAAGCT GCTGTGAGATCAGTG TERM 1866 2363057 - 2363033 - R 87 -17.2 -2.83504 | opp_overlap 2363033, overlap 2363032 2363030 GGGGCAGGAAAAGAG GCTTCCCGCC GCGAG GGCGGGAAGC TGCTGTGAGATCAGT TERM 1867 2363033 - 2363057 + r 83 -17.2 -2.63715 | opp_overlap 2363032 2363030 2363033 GGGGCAGGAAAAGAG GCTTCCCGCC GCGAG GGCGGGAAGC TGCTGTGAGATCAGT Ajs_2228 2363865 - 2363068 - | hypothetical protein TERM 1868 2364141 - 2364122 - R 95 -10.7 -4.40561 | TTCCGCGAAAAAGAA GAGCCCC GACGTG GGGGCTC GAATGGGTTGCGGGT Ajs_2229 2364872 - 2364156 - | hypothetical protein TERM 1869 2364425 - 2364415 - G 70 -2.4 -4.70583 | overlap 2364416 GCCACGAACAGAAAA CCGC TCG GCGT GGCGATGTCCGCCAG TERM 1870 2365083 - 2365046 - R 76 -12.8 -3.51232 | gap 1, overlap 2365042 2365047 2365049 CTCCTGCGAAAGGAA GGAGGGACATG-GCCCC GAACG GGGACGCATGTCCCTCG TGGGGTGGGATGAAA TERM 1871 2365082 - 2365047 - R 81 -16.3 -2.70525 | gap 1, overlap 2365046 2365042 2365049 TCCTGCGAAAGGAAG GAGGGACATG-GCCCC GAACG GGGACGCATGTCCCTC GTGGGGTGGGATGAA TERM 1872 2365080 - 2365049 - R 70 -13.1 -2.89569 | gap 1, overlap 2365047 2365046 2365042 CTGCGAAAGGAAGGA GGGACATG-GCCCC GAACG GGGACGCATGTCCC TCGTGGGGTGGGATG Ajs_2230 2365515 - 2365123 - | hypothetical protein Ajs_2231 2365777 - 2365541 - | hypothetical protein TERM 1873 2366463 - 2366413 - R 70 -11.7 -3.14564 | gap 1, opp_overlap 2366452, overlap 2366416 CGATTCGTGGAGCAA TGACCTTCTCGCCCCGTC-GCCCG ACGG CGGGCAGACGGGGCGCGCACACCG TTGCAGAAGGAGACG TERM 1874 2366460 - 2366416 - R 75 -14.2 -2.77899 | gap 1, opp_overlap 2366452, overlap 2366413 TTCGTGGAGCAATGA CCTTCTCGCCCCGTC-GCCCG ACGG CGGGCAGACGGGGCGCGCACA CCGTTGCAGAAGGAG Ajs_2233 2368574 - 2366559 - | DNA topoisomerase III Ajs_2234 2369252 - 2368869 - | single-strand DNA-binding protein Ajs_2235 2369800 - 2369249 - | hypothetical protein Ajs_2236 2370576 - 2369797 - | hypothetical protein Ajs_2237 2370891 - 2370700 - | hypothetical protein Ajs_2238 2371207 - 2370920 - | addiction module antitoxin Ajs_2239 2371493 - 2371194 - | addiction module antitoxin TERM 1875 2372106 - 2372136 + r 76 -14.1 -3.21099 | opp_overlap 2372092, overlap 2372116 ACGGGCGCGCAGCAT TCCGAAGAAGGGC TTCCT GGCCTTCTTCGGA TTCGTGGTCCGCACC Ajs_2241 2375615 - 2372700 - | transposase Tn3 family protein TERM 1876 2373109 - 2373096 - G 70 -2.3 -4.67353 | overlap 2373067 2373097 GTAGTCAGCCAAAAA CGCCG TACG CAGCA ACCGCCCCAATTGCA TERM 1877 2373432 - 2373444 + g 86 -9.1 -4.63932 | opp_overlap 2373428 ATCCACAGCAAGCTG GCTGG TCT CCAGC TTTTCTTGGCGGATG TERM 1878 2375750 - 2375760 + H 74 -2.4 -4.88736 | opp_overlap 2375750 TATTGCACTGAAAAC GAGG AGA CCCC TTTTTATAGCTGCTC TERM 1879 2375791 - 2375803 + H 80 -4.7 -4.84761 | overlap 2375792 GCGCTTACCAGCATT GCGGC GGG GCCGG TTTTTATCGGGATCT Ajs_2242 2375932 - 2376354 + | hypothetical protein Ajs_2243 2378915 - 2376372 - | radical SAM domain-containing protein TERM 1880 2376621 - 2376565 - G 76 -8.4 -4.25104 | gap 1, opp_overlap 2376598 2376617, overlap 2376566 2376569 GCGCTGCTACGAAAA CGCACGTCGCCCTGCGGCTCCTCCAGC TCCT GCGGGCGGCGGCGCAGCGCCACG-GCC TTGCCGTCCTTGTTG TERM 1881 2376648 - 2376681 + g 83 -4.5 -5.06414 | gap 1, overlap 2376650 2376652 GTTGATGGTGTAGCC CA-CGCCGGCCCCG CCACCCT TGGGCCCGGTGCTG TTTTTCTTGCGGGCG TERM 1882 2379095 - 2379082 - g 81 -5.2 -4.73613 | TCATCATCAAGAAAA GCCG CTTCAT CGGC TGCGTGCAGCCCATG Ajs_2244 2378955 - 2379623 + | hypothetical protein Ajs_2245 2379733 - 2381145 + | dihydrolipoamide dehydrogenase Ajs_2246 2381302 - 2381505 + | hypothetical protein TERM 1883 2381500 - 2381523 + T 100 -10.2 -5.0133 | gap 1, opp_overlap 2381495 CAGCTCAACACCTAC GCCTGACGCGC ACG GCGCG-CTGGC TTTTTTCGGCGGCTC Ajs_2247 2382691 - 2381564 - | FAD dependent oxidoreductase Ajs_2248 2384263 - 2382713 - | amidase Ajs_2249 2385284 - 2384307 - | hypothetical protein Ajs_2250 2386710 - 2385355 - | D-serine dehydratase Ajs_2251 2386808 - 2387761 + | LysR family transcriptional regulator Ajs_2252 2387813 - 2388115 + | XRE family transcriptional regulator Ajs_2253 2388140 - 2389453 + | HipA domain-containing protein TERM 1884 2389527 - 2389504 - T 73 -8.8 -4.07568 | gap 1, opp_overlap 2389526, overlap 2389505 CCCCGTCGGTGAAAA GCCTGTGGGGC CAC GCCCCGCAG-C AGCTCGGTGCCCGAC Ajs_2254 2390585 - 2389686 - | LysR family transcriptional regulator TERM 1885 2389967 - 2389947 - G 70 -11.1 -3.53811 | opp_overlap 2389954 2389965 CGCAGCGGGCGCAAA GCCCAACTG GCG CAGATGGGC GTCCGTCGCCATTCG TERM 1886 2390695 - 2390708 + G 100 -8.1 -5.78622 | AATGCAAAGTTTGCT GGACC CTGC GGTCC TTTTTTTTGCGCTGG TERM 1887 2390717 - 2390727 + G 72 -8.2 -4.08945 | GCGGTCCTTTTTTTT GCGC TGG GCGC TTTTGCGGGCCTGGT Ajs_2255 2390681 - 2391748 + | hypothetical protein Ajs_2256 2392432 - 2391869 - | ankyrin Ajs_2257 2392835 - 2392503 - | small multidrug resistance protein Ajs_2258 2393786 - 2392941 - | 5-carboxymethyl-2-hydroxymuconate delta-isomerase TERM 1888 2393055 - 2393020 - G 83 -12.7 -4.15044 | gap 3, opp_overlap 2393004 CCCGCGCGCAAGAAA CG-CGGCGTGGGCTTCTG TCC CAG--GCCCACGCCGGCG GGCGTGCCGGTGAGC TERM 1889 2393742 - 2393762 + g 77 -13.9 -3.35679 | overlap 2393743 CTGGGCGTCGATCAG GCCGGCGCG CTC CGCGCCGGG TTGTCCGTGGCGGAC TERM 1890 2393743 - 2393761 + g 80 -17.4 -2.61264 | overlap 2393742 TGGGCGTCGATCAGG CCGGCGCG CTC CGCGCCGG GTTGTCCGTGGCGGA Ajs_2259 2393938 - 2394546 + | chromate transporter Ajs_2260 2394554 - 2395156 + | chromate transporter Ajs_2261 2395835 - 2395164 - | 3,4-dihydroxy-2-butanone 4-phosphate synthase TERM 1891 2395927 - 2395884 - R 74 -10.3 -3.69283 | gap 3, overlap 2395887 CAAGGCATGCAAGAA GCACCCACGCGCGCCATGGGCC CGG GGCCC--GGCACGCGCGAA-GC ACACGGCCGCGCCCA TERM 1892 2395929 - 2395970 + r 90 -13.6 -4.00042 | gap 1, opp_overlap 2395931, overlap 2395931 GGCACGCGCGAAGCA CACG-GCCGCGCCCAGGGC GCTGG GCCCCGGTCGCGGCACGTC TTCTTTCATCCGGAC TERM 1893 2395968 - 2395931 - R 90 -18.4 -2.90392 | gap 1, opp_overlap 2395931 2395929 CACGCGCGAAGCACA CG-GCCGCGCCCAGGGC GCTGG GCCCCGGTCGCGGCACG TCTTCTTTCATCCGG TERM 1894 2395931 - 2395968 + r 91 -16.2 -3.59252 | gap 1, opp_overlap 2395931, overlap 2395929 CACGCGCGAAGCACA CG-GCCGCGCCCAGGGC GCTGG GCCCCGGTCGCGGCACG TCTTCTTTCATCCGG Ajs_2262 2396939 - 2396157 - | silent information regulator protein Sir2 TERM 1895 2396231 - 2396204 - G 72 -13.4 -3.10464 | gap 1, overlap 2396174 2396196 GCAGCAACGGCAACA GCCGCGCCGC-CG GGT CGCGCAGCACGGC GTGGGCGATACCGTC Ajs_2263 2397604 - 2396936 - | TetR family transcriptional regulator Ajs_2264 2397693 - 2398046 + | hypothetical protein Ajs_2265 2398104 - 2398556 + | 3-demethylubiquinone-9 3-methyltransferase Ajs_2266 2398556 - 2399026 + | activator of Hsp90 ATPase 1 family protein Ajs_2267 2399093 - 2399545 + | 3-demethylubiquinone-9 3-methyltransferase Ajs_2268 2400312 - 2399566 - | RNA methyltransferase TERM 1896 2400435 - 2400411 - H 74 -9.3 -3.85698 | gap 1, opp_overlap 2400410 TCTTCCCTTGACAAA CGG-GCCGCT GCCACA AGCGGCGCCG CTTGCCTGACCGCCT Ajs_2269 2400559 - 2401761 + | serine/threonine transporter SstT Ajs_2270 2402624 - 2401872 - | ABC transporter related Ajs_2271 2402625 - 2403272 + | GDSL family lipase Ajs_2272 2404124 - 2403288 - | integral membrane protein Ajs_2273 2405466 - 2404219 - | cystathionine beta-lyase Ajs_2274 2405952 - 2405500 - | transport-associated TERM 1897 2405848 - 2405866 + g 72 -11.6 -3.61715 | overlap 2405832 2405845 GTCCAGGCGTTGCCC GGCCGTGG GTT CCTCGGCC TTGTTACAAGCACTC Ajs_2275 2406107 - 2407849 + | sulphate transporter Ajs_2276 2407884 - 2408657 + | diguanylate cyclase TERM 1898 2408710 - 2408729 + G 86 -16.4 -3.52652 | CCGACGACTCCACCG GCCGGCGC CGCT GCGCCGGC TTCTGCTTCCGTGCC Ajs_2277 2408671 - 2409558 + | cobyrinic acid a,c-diamide synthase TERM 1899 2409563 - 2409600 + T 78 -3.5 -4.96848 | gap 1, opp_overlap 2409564 2409566, overlap 2409564 ATCGCTCCTGAAAAA ATAGCTGCTAGCGCTT ACCTAAC AAGCGCTA-CAGCCAA TTTTTCTCTCAACAA TERM 1900 2409599 - 2409564 - T 100 -10.6 -5.00616 | gap 1, opp_overlap 2409564 2409563, overlap 2409566 TCGCTCCTGAAAAAA TAGCTGCTAGCGCTTAC CTA ACAAGCGCTA-CAGCCA ATTTTTCTCTCAACA TERM 1901 2409597 - 2409566 - T 84 -11 -4.13561 | gap 1, opp_overlap 2409564 2409563, overlap 2409564 GCTCCTGAAAAAATA GCTGCTAGCGCTTAC CTA ACAAGCGCTA-CAGC CAATTTTTCTCTCAA Ajs_2278 2410522 - 2409617 - | pirin domain-containing protein TERM 1902 2410454 - 2410400 - G 88 -10.5 -4.34263 | gap 1, overlap 2410394 2410401 GTCGAAGAACACAAA GGGCCCCACCGACCGGCG-CTGCAGC GCCG GCAGCAGGCGGCGCACGGTGAAGCCG CCGCCCAGGTCCTTG TERM 1903 2410453 - 2410401 - G 73 -14 -3.19835 | gap 1, overlap 2410394 2410400 TCGAAGAACACAAAG GGCCCCACCGACCGGCG-CTGCAGC GCCG GCAGCAGGCGGCGCACGGTGAAGCC GCCGCCCAGGTCCTT Ajs_2279 2410986 - 2410519 - | OsmC family protein TERM 1904 2411768 - 2411724 - R 71 -12.8 -3.05294 | GCAAATGGGGCAACA GGCGCAGCGCGGC-GGGGGACA CCG TGTCGCCCTGCAGCGC-GCGCA GGGACGGCAGGTCGT TERM 1905 2411984 - 2412014 + r 72 -13.8 -2.82623 | overlap 2411981 2411987 GTCGTAGCGCGCCTC CCAGCCCGGCGCGG GGG CCACGCCGCGCAGG TCGTTGTCGGCCGCA TERM 1906 2412623 - 2412680 + r 74 -9.8 -3.71848 | gap 3, overlap 2412623 2412641 GCCCAGGCCCAGGTG C-GGGTCGTTGGCCAGCA-GCGGCCGGCC GCT GGCCGTGCGCGTGCCGTCCAGC-ACCCAG TTGTTGCTGCCGCGC TERM 1907 2413083 - 2413064 - R 78 -4.8 -4.77438 | overlap 2413066 ACCCAGCAGCAAAAA CTCCGGCG GCAG CGCCTGGG TCCGCGCCGTGTGGA TERM 1908 2413504 - 2413454 - R 70 -12.5 -2.89564 | gap 1, opp_overlap 2413501 TGCGCAGCGCATACA CCGCGGCCACGCTGCCGGCCAGCA GCAG CGCTG-CCACCAGCGCCACCACGG CGCCCGCGCCGATGC Ajs_2281 2414612 - 2413626 - | muramoyltetrapeptide carboxypeptidase Ajs_2282 2415690 - 2414605 - | CMP/dCMP deaminase, zinc-binding Ajs_2283 2415980 - 2415744 - | hypothetical protein Ajs_2284 2417223 - 2416009 - | sodium/glutamate symporter TERM 1909 2416087 - 2416069 - G 77 -12.4 -3.72324 | CAGGTCGATGAAGAA CGCGCCCA CCA TGGGCACG ATCAGGAAAGCCTTG TERM 1910 2417282 - 2417242 - H 71 -8.2 -3.89756 | overlap 2417245 2417264 ATCTCAAAGGAAGAA CCAC-GCCGGCGGACGCAAC CCA GCCGTG-CCGCTGGCGGTGG AAGCGGCAGGCGCAC Ajs_2285 2417354 - 2419432 + | peptidase U32 Ajs_2286 2419729 - 2421009 + | O-acetylhomoserine/O-acetylserine sulfhydrylase Ajs_2287 2422439 - 2421078 - | hypothetical protein Ajs_2288 2423460 - 2422459 - | hypothetical protein TERM 1911 2423726 - 2423705 - R 100 -18.7 -5.67063 | CCGAGGATAAAAAAA GGGCCGGCG CATG CGCCGGCCC ACCCCACCATGAAGA Ajs_2289 2424344 - 2423757 - | OmpW family protein Ajs_2290 2425496 - 2424498 - | hypothetical protein TERM 1912 2424788 - 2424810 + g 76 -14.8 -3.16564 | CGGCCGCGACGATGC CGCGGCCCAG GGC CTGTGCCGCG TTGCTGGCCTGGCGG TERM 1913 2425358 - 2425405 + g 79 -7.2 -4.63218 | gap 4, overlap 2425362 CCCCTGCGGTCTTTT GCGCCGCCACTTTGGTC-ATGACG GACA CGTCGTCGGCCA---TGGCGGCGC TTTTCTTGGCGGCCA Ajs_2291 2425612 - 2426043 + | hypothetical protein Ajs_2292 2426183 - 2430208 + | hypothetical protein Ajs_2293 2430275 - 2431090 + | methionine aminopeptidase, type I TERM 1914 2432563 - 2432583 + G 86 -8.9 -4.72272 | overlap 2432578 CAGCACATCCTGATG GTGCTGCGC AAC GTGCGGCGC TTTTTCATGGCCGAG Ajs_2294 2431150 - 2433804 + | PII uridylyl-transferase Ajs_2295 2434402 - 2433863 - | peptide deformylase TERM 1915 2434082 - 2434064 - G 83 -16 -3.54424 | GTGGATGCGCGCAAA GCGCGGCA CCT TGCCGCGC AGGCCCGGCACGGAC TERM 1916 2434347 - 2434377 + g 77 -15.4 -3.04792 | AATGCGGTAACGGGT TGGGCCACCCGCAA CAG TCGCGGGTCGCCCA TCTTCAGGATGGTGC TERM 1917 2434544 - 2434579 + G 78 -14.6 -3.3062 | opp_overlap 2434550, overlap 2434536 2434571 CTGCCGCCCGTCCCT GAGCAAGCGCCCCTGC CCGC GCTGGCGCGCTGGCTC TTGCTGGTGTTTGCC Ajs_2296 2434508 - 2434927 + | hypothetical protein TERM 1918 2435210 - 2435237 + T 100 -14.2 -4.7254 | opp_overlap 2435210 TGAGGAGCCATTCAA GGCCATTCCAGC ATCT GTTGGGATGGCC TTTTTGCTGGGCGCT TERM 1919 2435294 - 2435276 - T 100 -13.1 -5.44119 | opp_overlap 2435287 GCTAGGGCAAAAAAA CCCGCCG ACCAG CGGCGGG CCCAGTCACGCACCC Ajs_2297 2436585 - 2435326 - | isocitrate dehydrogenase Ajs_2298 2436692 - 2437123 + | hypothetical protein TERM 1920 2437146 - 2437161 + F 100 -11.8 -4.75372 | opp_overlap 2437146 GGCCACTGCTGAACA GCCCGC TTCG GCGGGC TTTTTGCTGCCTGCT Ajs_2299 2437210 - 2437725 + | hypothetical protein TERM 1921 2437911 - 2437886 - T 100 -18.3 -5.75342 | GGCGTGCAAAAAAAA CCGGCCTCCCC TTGC GGGAAGGCCGG TGACGGCCAGGTGCC Ajs_2300 2440193 - 2437959 - | isocitrate dehydrogenase, NADP-dependent TERM 1922 2438220 - 2438250 + g 79 -11.8 -3.84406 | CTGGCTGCCGCGGTT GTCGATCTCGCCCA CCT TGCGCGAGGGCGAC TTGTTCTCGTCCAGC TERM 1923 2439616 - 2439629 + g 70 -2.4 -4.60487 | ACGTCGCGGGCCTTG TCCA GGGTCA TGGA TTTTTCGCCGTGATA TERM 1924 2440463 - 2440488 + r 100 -20.5 -4.35044 | opp_overlap 2440463 AGCCAGACGAAAAAA CGGCCCGCAGA TTCC TCTGCGGGCCG TTTGTCTTTGGGTCG TERM 1925 2440488 - 2440463 - R 100 -20.5 -5.22312 | opp_overlap 2440463 AGCCAGACGAAAAAA CGGCCCGCAGA TTCC TCTGCGGGCCG TTTGTCTTTGGGTCG Ajs_2301 2441119 - 2440538 - | superoxide dismutase Ajs_2302 2442604 - 2441267 - | exodeoxyribonuclease VII large subunit TERM 1926 2441511 - 2441544 + g 80 -9.6 -4.18018 | gap 1, overlap 2441512 TGAGGAAAATGACTC TGCAGC-GCTTGCCC CGCAT GCGCAAGCCGCTGCG TTTTCAATAGCAAAC TERM 1927 2442725 - 2442740 + H 91 -3.2 -5.52384 | AAGAGTACGTGCAAC CCATTG ATTT CAAAGG TTTTTTTGATGCGCA TERM 1928 2443041 - 2443056 + G 75 -4.6 -4.59853 | overlap 2443028 2443050 ATTGCCTGTTCCATC CTGGCG CTGG CGCTGG TTTTTGAGCGCTTCG Ajs_2303 2442981 - 2443619 + | MotA/TolQ/ExbB proton channel Ajs_2304 2443651 - 2444076 + | biopolymer transport protein ExbD/TolR Ajs_2305 2444087 - 2445103 + | lipid-A-disaccharide synthase Ajs_2306 2445112 - 2445294 + | hypothetical protein Ajs_2307 2445291 - 2446079 + | 3-deoxy-D-manno-octulosonate cytidylyltransferase adk 2446201 - 2446857 + | adenylate kinase TERM 1929 2446878 - 2446907 + T 93 -20.1 -2.87132 | gap 1, overlap 2446880 2446883 CCGCCGCCGGCTCCC GC-CAACGCCCCGC AAC GCGGGGCGTTGTGC TGTGTGCCCAGGCAA TERM 1930 2446880 - 2446904 + T 100 -21.5 -2.69151 | overlap 2446878 2446883 GCCGCCGGCTCCCGC CAACGCCCCGC AAC GCGGGGCGTTG TGCTGTGTGCCCAGG TERM 1931 2446883 - 2446901 + T 93 -17.4 -3.49777 | overlap 2446880 2446878 GCCGGCTCCCGCCAA CGCCCCGC AAC GCGGGGCG TTGTGCTGTGTGCCC Ajs_2309 2447916 - 2446945 - | asparaginase Ajs_2310 2447999 - 2448673 + | LexA repressor Ajs_2311 2448835 - 2449236 + | hypothetical protein TERM 1932 2449698 - 2449717 + G 77 -12.1 -3.72576 | CAGCCGCCAGCGCGC GCGCCGC CTACCT GCGGCGC TTTCCTGAGGCAGCG Ajs_2312 2449358 - 2449858 + | pyridoxamine 5'-phosphate oxidase-related, FMN-binding Ajs_2313 2454113 - 2450088 - | ATP-dependent helicase HrpA TERM 1933 2450916 - 2450969 + g 70 -2.1 -4.67552 | gap 1, opp_overlap 2450913, overlap 2450922 CAGTTCGCCAAAGCT CCAATCCTCGTAGCGGGCATCGGCCT TGC GGGCCGCGGGC-GCGCCGACGAGTGG TTCTTTTTTGATAGC TERM 1934 2450987 - 2450997 + g 72 -4.6 -4.5287 | CTTTTTTGATAGCTG CTGG CGC CCGG TTTTCCTTGGTTTCA TERM 1935 2451924 - 2451968 + g 85 -13.5 -4.1552 | gap 1, opp_overlap 2451923 GCCGCTGTAGACCAC CAGGCCGTAGAGCGTGGCGC GCTCGA GCGCCAC-CACGTCGGCCTG TTTCTTGGACCAATG TERM 1936 2453923 - 2453974 + g 70 -2 -4.58395 | overlap 2453925 TGGCCGATCAGGCGC CCGCGCGTGCCCTCGGGCGC ATTGCACTTGCC GCGTCCCAGGGCCAGCGCTA TTTTTGGCAGCTGCG TERM 1937 2453925 - 2453972 + g 73 -9 -3.90762 | overlap 2453923 GCCGATCAGGCGCCC GCGCGTGCCCTCGGGCGC ATTGCACTTGCC GCGTCCCAGGGCCAGCGC TATTTTTGGCAGCTG Ajs_2314 2455501 - 2454161 - | SAF domain-containing protein Ajs_2315 2455792 - 2456979 + | metallophosphoesterase TERM 1938 2457211 - 2457184 - T 72 -13.4 -2.72661 | gap 1, opp_overlap 2457202 CAGCACGGTGAAGTA GCGCTCC-AGCGC CTC GCGCTCGGTGCGC GTGCGGTTGACGGGT Ajs_2316 2457861 - 2457163 - | nitroreductase Ajs_2317 2459033 - 2457864 - | acetyl-CoA acetyltransferases Ajs_2318 2460514 - 2459030 - | AMP-dependent synthetase and ligase TERM 1939 2459739 - 2459696 - G 73 -10.9 -3.62597 | gap 2, overlap 2459697 TGCACGCGGGAACAA CCGGCGCAGCGCGGGTGTGCG CTCG CGCAG-CCAGCGC-GCGCCGC TGATCAGCACCAGCT Ajs_2319 2461095 - 2460511 - | BioY protein Ajs_2320 2461725 - 2461132 - | cobalt transport protein Ajs_2321 2462597 - 2461743 - | ABC transporter related Ajs_2322 2462772 - 2464049 + | major facilitator superfamily transporter Ajs_2323 2464477 - 2464130 - | hypothetical protein TERM 1940 2464731 - 2464713 - g 95 -2.3 -5.61596 | overlap 2464717 ACTTCGACAAAAAAA CCAGCGT GGTGG ACCCCGG CCATGCGCAGCGGCT Ajs_2324 2464583 - 2465251 + | methyltransferase type 11 TERM 1941 2465326 - 2465307 - T 100 -13.6 -5.1287 | opp_overlap 2465307 GTCAGACGCAAAAAA GGCCGTGA ATCC TCACGGCC TTTCTTTGTCAGCGG TERM 1942 2465307 - 2465326 + T 100 -13.6 -4.55295 | opp_overlap 2465307 GTCAGACGCAAAAAA GGCCGTGA ATCC TCACGGCC TTTCTTTGTCAGCGG Ajs_2325 2466326 - 2465352 - | hypothetical protein TERM 1943 2466421 - 2466402 - H 100 -11.4 -5.54907 | TGCAGAAAAGAAAAA GCGTCCGC TGGG GCGAACGC ATCATCAGGGTTAAC Ajs_2326 2466829 - 2468037 + | acyltransferase 3 TERM 1944 2468215 - 2468266 + F 85 -10.1 -4.34402 | gap 3 GCTACACTGCGGCCT GCGCGTGCTGGC-GCCCCTGC-CCTG GTA CAGGCGCACGGGAAGCC-GCGAGCGC TTTTCGTCTCCGCCC TERM 1945 2469071 - 2469084 + G 70 -2.3 -4.65895 | CCGCCCGCGCAGCAG CCGAC CGAT GTGGG TTTTTACCTGCAGCA Ajs_2327 2468324 - 2469670 + | N-acetylglutamate synthase Ajs_2328 2470564 - 2469674 - | Beta-lactamase Ajs_2329 2470668 - 2471534 + | LysR family transcriptional regulator TERM 1946 2471577 - 2471567 - f 88 -6.8 -5.16237 | opp_overlap 2471567 AACCGCATCAAAAAA GCCT TTC AGGC TTATAGATCAAGCGC Ajs_2330 2471629 - 2472030 + | hypothetical protein TERM 1947 2475811 - 2475837 + G 71 -12.2 -3.30441 | overlap 2475812 CTGCACAGCTGGGAC TGGCTGCCGCTG CTG CAGCGCCGGCCG TTGTGGGACGTGCTG Ajs_2332 2474422 - 2475975 + | PepSY-associated TM helix domain-containing protein Ajs_2333 2476001 - 2476672 + | glutaredoxin Ajs_2334 2477283 - 2476759 - | disulphide bond formation protein DsbB Ajs_2335 2478473 - 2477346 - | sulfate ABC transporter, ATPase subunit TERM 1948 2478500 - 2478542 + r 77 -12.5 -3.61589 | gap 1, overlap 2478488 2478496 TCAGCGCGGCGCGCC GGGCGCGGGCGC-AGGCCGC TCGG GCGGCAGCGCGGCCGCGGCC TTCATTTCCTGTTCG Ajs_2336 2479396 - 2478485 - | sulfate ABC transporter, inner membrane subunit CysW Ajs_2337 2480244 - 2479393 - | sulfate ABC transporter, inner membrane subunit CysT TERM 1949 2480215 - 2480228 + g 73 -3.7 -4.64676 | overlap 2480216 CAATACCCTCTTGGC TCGCC TGGG GGCGC TTTTCTTGCCACTCA TERM 1950 2480288 - 2480278 - R 73 -8.2 -4.07568 | overlap 2480279 CGCCGCCGGTCAAAA GCCG GTG CGGC CCACGCCCGCAGGCA Ajs_2338 2481399 - 2480392 - | sulfate ABC transporter, periplasmic sulfate-binding protein TERM 1951 2481200 - 2481236 + g 82 -6.3 -4.81212 | overlap 2481198 TGGGCGCTGGAGCCG CCATGGGCCTGGTCTAC CTT GATGTCCACGCCCTTGG TTTTCTTGTAGTGGG TERM 1952 2481699 - 2481753 + r 79 -13.5 -3.53091 | opp_overlap 2481730 CGGGGCAGTGCCGCG CCG-GCCGTGGCCGTGTCGCCCCGCTC ACA GACCGCGGCGGAATGGCCG-GGCACGG TTTCACCCAGAAAGT Ajs_2339 2482633 - 2481680 - | LysR family transcriptional regulator Ajs_2340 2482761 - 2483411 + | (Acyl-carrier-protein) phosphodiesterase TERM 1953 2483469 - 2483434 - T 95 -18.4 -3.53012 | gap 1, opp_overlap 2483439 2483466, overlap 2483439 CGGCGCCCCGCCAAA CAAAACCCGCCTCCGGC CAT GCCGG-GGCGGGTTTTT TCTATAAAAATGGGT TERM 1954 2483464 - 2483439 - T 100 -18.3 -4.86731 | gap 1, opp_overlap 2483439, overlap 2483434 CCCCGCCAAACAAAA CCCGCCTCCGGC CAT GCCGG-GGCGGG TTTTTTCTATAAAAA TERM 1955 2483439 - 2483464 + T 100 -18.3 -5.36441 | gap 1, opp_overlap 2483439 2483434 CCCCGCCAAACAAAA CCCGCCTCCGGC CAT GCCGG-GGCGGG TTTTTTCTATAAAAA TERM 1956 2483493 - 2483480 - T 74 -2.3 -4.82901 | opp_overlap 2483481, overlap 2483481 TTTTTTCTATAAAAA TGGGT TCTA ACCCT TGATTTTCAAGCGCG Ajs_2341 2484086 - 2483535 - | NADPH-dependent FMN reductase Ajs_2342 2485053 - 2484253 - | YaeC family lipoprotein Ajs_2343 2486364 - 2485258 - | hypothetical protein TERM 1957 2485902 - 2485924 + g 71 -9 -3.78934 | opp_overlap 2485875 2485874 AGGGTGCGAGGTGCA CGGTCTGGCG CGG CGCGGGGCCG TTCTTCTCCACGACC Ajs_2344 2487191 - 2486526 - | binding-protein-dependent transport systems inner membrane component Ajs_2345 2488248 - 2487202 - | ABC transporter related TERM 1958 2489706 - 2489724 + G 74 -12.4 -3.53224 | CATGGCGACCACGCT CACCGGCG CCA CGCTGGTG TTTGGCGCGGCGGTG Ajs_2346 2488789 - 2490021 + | major facilitator superfamily transporter Ajs_2347 2490438 - 2490031 - | membrane protein-like protein TERM 1959 2490453 - 2490489 + r 72 -4.3 -4.53398 | overlap 2490455 TTTTTGCAGTGTTTT TGGCCTCCAGCGCTTAT CCA ACAAGCGCTAGCAGCTA TTGTTTTTGATATTC recR 2491093 - 2490503 - | recombination protein RecR Ajs_2349 2491584 - 2491252 - | hypothetical protein Ajs_2350 2493654 - 2491615 - | DNA polymerase III, subunits gamma and tau TERM 1960 2491791 - 2491843 + g 87 -18.9 -2.71364 | CCACGCTGATCTGGC GCGCATGGCCCGCGGCCTCCAGCGC CGC GCGCAGGCGCTCGCGCGCCGTGGGC TGGTTGAGCGACTCC Ajs_2351 2493709 - 2494170 + | hypothetical protein Ajs_2352 2494519 - 2495217 + | hypothetical protein Ajs_2353 2496646 - 2495303 - | hypothetical protein Ajs_2354 2497355 - 2496660 - | methyltransferase type 11 Ajs_2355 2500764 - 2497459 - | UvrD/REP helicase TERM 1961 2497581 - 2497549 - G 72 -11.9 -3.53012 | CCGCTCGCCCGGAAA CTGCGCTCCCACCGC TTC GCGGTACAGGCGCAG CTGGGCCATCAGCTG TERM 1962 2499490 - 2499462 - G 73 -13.8 -3.17527 | gap 1, overlap 2499460 CACCGACGATGAACA CGCTGGGCGGCTG CTGG CCGCCGCCC-GCG CCCGCGTAACCGGCC Ajs_2356 2503327 - 2500757 - | exonuclease-like protein Ajs_2357 2503443 - 2503775 + | thioredoxin TERM 1963 2503784 - 2503810 + F 88 -17.3 -3.03124 | GGCCTGATTCCCTTC TTGCCGGCCGC CCTCC GCGGCCGGCAG TCTTCCGAGGTGCGC rho 2504015 - 2505277 + | transcription termination factor Rho TERM 1964 2505304 - 2505323 + F 100 -12.1 -4.72272 | CCACCGCTTTGCCCA GCCCCGC CATCGT GCGGGGC TTTTTCATGGCCGCC TERM 1965 2506705 - 2506690 - g 75 -6.8 -4.30576 | GGCCGACTACGAAAA GACCGT GCAG ACGGCC TTCCGCGAAGTGTCA Ajs_2359 2505494 - 2506972 + | RND efflux system outer membrane lipoprotein Ajs_2360 2506993 - 2508063 + | secretion protein HlyD family protein Ajs_2361 2508088 - 2510898 + | ABC transporter related Ajs_2362 2510902 - 2512050 + | ABC-2 type transporter Ajs_2363 2512148 - 2512402 + | 50S ribosomal protein L31P TERM 1966 2512428 - 2512410 - f 72 -11.7 -3.30554 | overlap 2512403 CGAAGTAAGCAGCAA GGCCTGC CCCGT GCAGGCC CGTGCAGGCAGGTGG TERM 1967 2512474 - 2512498 + F 100 -12.8 -5.4505 | opp_overlap 2512471 2512474 CACCTGCACACACTA GGCAGCCCGG CTTCT CCGCGCTGCC TTTTTTATTGCGCAC TERM 1968 2512814 - 2512866 + G 73 -14.8 -2.83715 | overlap 2512822 GCGTGGGCCATCCAG GCGCTGGACGGCTGGCTGC-CGGCGG AGC TTGCCGCGC-GCCTGCCGTTCGTCGC TCTGCTGCTGCTGAC TERM 1969 2513581 - 2513596 + G 72 -11.8 -3.59979 | overlap 2513591 GGGCCTGCCCGCCCT GGCGGC GCTG GCCGCC TTTGCGCTGCCGACG Ajs_2364 2512553 - 2514250 + | putative inner membrane transmembrane protein TERM 1970 2515511 - 2515543 + GT 70 -7.5 -4.08216 | overlap 2515512 2515515 CGCCTTTTTGGGCCG CCAGCGCTGCCGCTC TAG GCGCGACGGCGTTGA TTTTCACGGCCCTGC Ajs_2366 2516968 - 2515571 - | multi-sensor signal transduction histidine kinase Ajs_2365 2514250 - 2515626 + | MATE efflux family protein TERM 1971 2517021 - 2516999 - TR 100 -10.5 -5.64873 | GTCAACAACAAAAAA GCGCCCGCA TCATC TCCGGGCGC CTGAAAAAACACGGG TERM 1972 2517067 - 2517031 - TR 83 -5 -5.00616 | gap 1, overlap 2517033 GGGCGCCTGAAAAAA CACGGGGGCGT-CGGGC ACCC GCCATCACGCCCGCATG AGTGTCTGCGGCTGC TERM 1973 2517051 - 2517033 - TR 72 -7.3 -4.13561 | overlap 2517031 GCGCCTGAAAAAACA CGGGGGC GTCGG GCACCCG CCATCACGCCCGCAT Ajs_2367 2517762 - 2517055 - | two component transcriptional regulator Ajs_2368 2518480 - 2517779 - | phosphate uptake regulator, PhoU Ajs_2369 2519277 - 2518495 - | phosphate ABC transporter, ATPase subunit pstA 2520181 - 2519300 - | phosphate transporter permease subunit Ajs_2371 2521191 - 2520178 - | phosphate ABC transporter, inner membrane subunit PstC Ajs_2372 2522310 - 2521270 - | phosphate ABC transporter, periplasmic phosphate-binding protein Ajs_2373 2522511 - 2523002 + | beta-Ig-H3/fasciclin Ajs_2374 2523034 - 2524167 + | twin-arginine translocation pathway signal Ajs_2375 2524252 - 2525733 + | Ppx/GppA phosphatase TERM 1974 2525757 - 2525777 + F 95 -9.9 -4.65895 | opp_overlap 2525757 2525752 CGCCGCAACATAAAA CGATATAAA CTG TTTATATCG TTTTTCAATCAGGCA TERM 1975 2525777 - 2525757 - f 95 -9.9 -4.66537 | opp_overlap 2525757, overlap 2525752 CGCCGCAACATAAAA CGATATAAA CTG TTTATATCG TTTTTCAATCAGGCA Ajs_2376 2525799 - 2526233 + | hypothetical protein Ajs_2377 2526749 - 2526285 - | phosphohistidine phosphatase, SixA TERM 1976 2526639 - 2526653 + g 74 -5.6 -4.57073 | ATCGAGCCACACCGC CATGCG TGC CGCCTG TTTTTCGCCACGCTG Ajs_2378 2528917 - 2526746 - | polyphosphate kinase Ajs_2379 2529869 - 2529033 - | ornithine-acyl[acyl carrier protein] N-acyltransferase TERM 1977 2529971 - 2529987 + H 76 -9.4 -4.08706 | overlap 2529963 CCGTGACGGCGCGGT GTCGCC TTCGT GGCGAC TTTGTGTCATGGGAC TERM 1978 2530532 - 2530519 - g 72 -5.2 -4.3129 | overlap 2530520 2530521 CATCGACGAGCAAAA GCGC GCTCAG GCGC AGTTGCAGGCGGCCT Ajs_2380 2530052 - 2532322 + | diguanylate cyclase/phosphodiesterase Ajs_2381 2533724 - 2532390 - | phosphoglucosamine mutase TERM 1979 2532526 - 2532568 + g 72 -8.5 -4.15565 | overlap 2532530 2532531 CCATGGGCGCCCAAT TCGGCCTCTGCG-TCGCGGAT GGC ATCCGCGAGCACAG-GGTTGG TTTTCCAGTCCTGGC TERM 1980 2532530 - 2532563 + g 72 -14.7 -2.80537 | gap 1, overlap 2532526 2532531 GGGCGCCCAATTCGG CCTCTGCGTCGCGGAT GGC ATCCGCGA-GCACAGG GTTGGTTTTCCAGTC TERM 1981 2532531 - 2532564 + g 77 -12.5 -3.68366 | gap 1, overlap 2532530 2532526 GGCGCCCAATTCGGC CTCTGCG-TCGCGGAT GGC ATCCGCGAGCACAGGG TTGGTTTTCCAGTCC TERM 1982 2533801 - 2533748 - R 73 -11.5 -3.58343 | gap 1 TTGATTACTGGGAAA TGGCGGCGCCGGTGTCCTGCTGCCGC ATC GCG-CTCCACACCGCCAGCGCCGCCA CGGTCTCGCGTACGT Ajs_2382 2534588 - 2533737 - | dihydropteroate synthase TERM 1983 2534639 - 2534623 - R 100 -10.8 -4.74013 | opp_overlap 2534623 GTGAAATACAGAAAA CGGGGC GCGAG GCCCCG TTCTTCATGCCAAAC TERM 1984 2534623 - 2534639 + r 76 -10.8 -3.71848 | opp_overlap 2534623 GTGAAATACAGAAAA CGGGGC GCGAG GCCCCG TTCTTCATGCCAAAC Ajs_2383 2536579 - 2534660 - | FtsH peptidase Ajs_2384 2537436 - 2536723 - | ribosomal RNA methyltransferase RrmJ/FtsJ Ajs_2385 2537463 - 2537936 + | hypothetical protein Ajs_2386 2537948 - 2538709 + | hypothetical protein Ajs_2387 2539648 - 2538767 - | hypothetical protein TERM 1985 2538971 - 2538942 - G 73 -14.3 -3.14026 | CACATCCATACCGAA CCCGCCGGAAACG GCAC CGTTTCCTGCGGA CTGGTGCGCTGGTAC Ajs_2388 2540068 - 2539655 - | hypothetical protein Ajs_2389 2540556 - 2540080 - | transcription elongation factor GreA TERM 1986 2540619 - 2540587 - R 100 -17.8 -4.70659 | gap 1, overlap 2540592 TTCCAGATGCAAAAA GCAAACCGCCGCGCG TTGC CGCGCGGCGGTCT-C ACAAATCAAGGGCGA TERM 1987 2540615 - 2540592 - R 100 -21 -4.33653 | overlap 2540587 GATGCAAAAAGCAAA CCGCCGCGCG TTGC CGCGCGGCGG TCTCACAAATCAAGG Ajs_2390 2543845 - 2540684 - | carbamoyl-phosphate synthase large subunit Ajs_2391 2544347 - 2543946 - | hypothetical protein Ajs_2392 2545541 - 2544369 - | carbamoyl-phosphate synthase small subunit TERM 1988 2545768 - 2545743 - R 100 -19.1 -4.56978 | opp_overlap 2545743 GCGCCAAAGAAGAAA GGGACCACCGT TTTT ACGGTGGTCCC TTTGGCATAAATGGT TERM 1989 2545743 - 2545768 + r 100 -19.1 -3.61356 | opp_overlap 2545743 GCGCCAAAGAAGAAA GGGACCACCGT TTTT ACGGTGGTCCC TTTGGCATAAATGGT Ajs_2393 2546312 - 2545884 - | MerR family transcriptional regulator Ajs_2394 2546763 - 2546413 - | histone family protein DNA-binding protein pheT 2549204 - 2546760 - | phenylalanyl-tRNA synthetase subunit beta Ajs_2396 2550378 - 2549326 - | phenylalanyl-tRNA synthetase, alpha subunit TERM 1990 2550183 - 2550215 + g 77 -3.9 -4.81212 | overlap 2550162 GGGCTGCCTCCACGG CCTGCTTGGCCAC GTTGATG GCGGCCCCGCGGG TTTTCTTCTCCTCGG TERM 1991 2550399 - 2550432 + r 86 -13.9 -3.91716 | opp_overlap 2550399, overlap 2550402 CTCTTGAAAAAGAAA CAAGGGCTAGTGCCT TTTC AAGCCCTAGCCCTTG TTGTTTGCGCGCTAG TERM 1992 2550432 - 2550399 - R 100 -16.1 -4.85782 | opp_overlap 2550399 2550402 CTCTTGAAAAAGAAA CAAGGGCTAGTGCCT TTTC AAGCCCTAGCCCTTG TTGTTTGCGCGCTAG TERM 1993 2550402 - 2550429 + r 78 -9.8 -4.08557 | opp_overlap 2550399, overlap 2550399 TTGAAAAAGAAACAA GGGCTAGTGCCT TTTC AAGCCCTAGCCC TTGTTGTTTGCGCGC rplT 2550840 - 2550481 - | 50S ribosomal protein L20 Ajs_2398 2551070 - 2550867 - | 50S ribosomal protein L35P TERM 1994 2551173 - 2551152 - R 86 -15.1 -3.54543 | opp_overlap 2551163 2551165 AGCCACTTTTTCAAA CGACGCGCC TTGC GGCGCGCCG TGCGGCGGCACTTGC TERM 1995 2551163 - 2551211 + r 77 -2.1 -5.00616 | gap 1, opp_overlap 2551152, overlap 2551165 2551173 2551198 CAAACGACGCGCCTT GCG-GCGCGCCGTGCGGCGGCA CTTGCA TGCCGCCTATCGGCCGGCACCC TTTTTTAGGGGGCGC Ajs_2399 2551861 - 2551244 - | translation initiation factor 3 TERM 1996 2551280 - 2551301 + g 72 -11.5 -3.61398 | overlap 2551254 2551239 GGCGGGAGCGCTTTC GGCGGCAGG TTTA CCTGCCGGC TTCTTGCGGGCCGGC TERM 1997 2551885 - 2551869 - R 88 -8 -4.86621 | overlap 2551879 ACCTTCAATTAAAAA GCTACG AAAAG CGTAGC AGCTTACGCACCAGG Ajs_2400 2553840 - 2551921 - | Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase TERM 1998 2553924 - 2553906 - R 93 -8.8 -5.04601 | opp_overlap 2553906 TTCAGAAAGCAAAAA GCGCGG TACAGGT CCGCGC TTGTAAGGGGGCGAG TERM 1999 2554106 - 2554075 - R 93 -18.8 -3.1372 | opp_overlap 2554080, overlap 2554080 TACCCTGCAGCAATA GAAAAGCCCGAGGC GGGG GCCCCGGGCTTCTC GCATCAACCAAGAAG TERM 2000 2554080 - 2554101 + r 74 -12.9 -3.32844 | opp_overlap 2554080 2554075 TGCAGCAATAGAAAA GCCCGAGGC GGGG GCCCCGGGC TTCTCGCATCAACCA TERM 2001 2554101 - 2554080 - R 100 -15.1 -4.70583 | opp_overlap 2554080, overlap 2554075 TGCAGCAATAGAAAA GCCCGAGGC GGGG GCCCCGGGC TTCTCGCATCAACCA Ajs_2401 2555454 - 2554123 - | isocitrate lyase TERM 2002 2555624 - 2555640 + H 91 -9.5 -4.56597 | opp_overlap 2555606 2555621 2555624 CTATATGAAAATTCA TTTCTCG TAT CGAGAAA TTTTTCCGCAACGCA TERM 2003 2555703 - 2555666 - H 84 -4.2 -5.10665 | overlap 2555667 ACGCAACAAACAAAA TTTTCGCAATGAGAAA TTAGAC TTTCTCCATGCGAAAT AGCAGGTCTGGTGAG TERM 2004 2555974 - 2555946 - g 73 -10.9 -3.62597 | opp_overlap 2555973 CGGATGGTTGAAGAA GCCGCACCAGGAG CCA CCTCTGACGCGGC AGACCCAAGGCCTGC TERM 2005 2555973 - 2555989 + G 86 -7.9 -4.85599 | opp_overlap 2555946 GCCACCTCTGACGCG GCAGACC CAA GGCCTGC TTTTTCTGCAGTCGC Ajs_2402 2555728 - 2556729 + | hypothetical protein Ajs_2403 2557245 - 2556739 - | ribonuclease activity regulator protein RraA TERM 2006 2556872 - 2556912 + g 71 -12.6 -3.30124 | gap 1, overlap 2556873 TCGGTGGGCAACGGC ATGAGTG-CGAGTGCGCGG ATAC CCACGCGCTCGGCACTCAG TTCTGCCACGTCGCG TERM 2007 2556873 - 2556911 + g 77 -16.1 -2.57931 | gap 1, overlap 2556872 CGGTGGGCAACGGCA TGAGTG-CGAGTGCGCGG ATAC CCACGCGCTCGGCACTCA GTTCTGCCACGTCGC TERM 2008 2557280 - 2557306 + H 82 -14.4 -3.30124 | opp_overlap 2557273 GCATAAAGGGGATGG TGCGCCGCAGCA AGC TGCGGTGGCGCA TTCTCGCGCGTGACG Ajs_2404 2557469 - 2557759 + | SWIB/MDM2 domain-containing protein TERM 2009 2557821 - 2557800 - f 76 -8.7 -4.18488 | opp_overlap 2557802, overlap 2557802 AGCCAGGCGAACAAA GACCGGCAT GCGC ATGCCGGTT TTTTTCGCCTGCAAG TERM 2010 2557802 - 2557819 + F 100 -11.3 -5.44119 | opp_overlap 2557800 2557802 CCAGGCGAACAAAGA CCGGCAT GCGC ATGCCGG TTTTTTTCGCCTGCA TERM 2011 2557819 - 2557802 - f 76 -11.3 -3.69068 | opp_overlap 2557802, overlap 2557800 CCAGGCGAACAAAGA CCGGCAT GCGC ATGCCGG TTTTTTTCGCCTGCA Ajs_2405 2557946 - 2558218 + | BFD/(2Fe-2S)-binding domain-containing protein TERM 2012 2558263 - 2558275 + F 83 -4.8 -5.09426 | CTGCATAAATAGACC GCCT ATTCA AGGC TTTTTTGGCCTTCCG Ajs_2406 2558326 - 2559027 + | TonB family protein Ajs_2407 2559045 - 2559761 + | MotA/TolQ/ExbB proton channel Ajs_2408 2559768 - 2560178 + | biopolymer transport protein ExbD/TolR Ajs_2409 2560375 - 2560584 + | hypothetical protein TERM 2013 2560633 - 2560664 + T 90 -2.1 -5.47218 | gap 1, opp_overlap 2560642 CGAAGGGTCGTATTG GCCAGCCAACG-GG CATGC CCGCGTAGCCAGGC TTTTTTTCCCTGCAC TERM 2014 2560693 - 2560708 + T 100 -7.5 -5.7946 | opp_overlap 2560693 ACACCCATGAAAAAA CCGGC CCACGC GCCGG TTTTTTTGTTGGGAC TERM 2015 2560708 - 2560693 - T 93 -7.5 -5.17353 | opp_overlap 2560693 ACACCCATGAAAAAA CCGGC CCACGC GCCGG TTTTTTTGTTGGGAC Ajs_2410 2561213 - 2560806 - | hypothetical protein Ajs_2411 2561441 - 2562133 + | hypothetical protein TERM 2016 2562163 - 2562181 + F 100 -13.1 -4.62069 | GCACATGCGTCGCAA GGCCCCG ATTTC CGGGGCC TTTTTCACGTCCGCC TERM 2017 2562594 - 2562558 - g 86 -8.6 -4.84359 | gap 1, overlap 2562586 2562589 GCAGTTGGAGAAAAA GCCCGCCAGT-CGCCGC GCAA GCGACGAAGAGGCGGAC CTGCAGACCGAGGGT Ajs_2412 2562247 - 2562633 + | hypothetical protein rumA 2564158 - 2562710 - | 23S rRNA 5-methyluridine methyltransferase TERM 2018 2564189 - 2564205 + r 73 -10.8 -3.60296 | GGCCGGCCCACCCCT GCCGCC GCGCG GGCGGC TTTCAGCTGCGGCTG Ajs_2414 2564534 - 2564208 - | hypothetical protein Ajs_2415 2564563 - 2565231 + | ECF subfamily RNA polymerase sigma-24 factor Ajs_2416 2565348 - 2566169 + | hypothetical protein TERM 2019 2566230 - 2566286 + F 73 -8.1 -4.07687 | gap 1, opp_overlap 2566244, overlap 2566240 2566244 TGAGGCACCCCCTTC GTTGAAGTAGGCAAGGCAGCCACACA TTCCCT TGAGCGGCTGCCTTGA-TGGTTCAAC TTTTCAACGGAGCAT Ajs_2417 2566306 - 2566785 + | hypothetical protein TERM 2020 2567293 - 2567321 + GT 84 -16 -3.08679 | opp_overlap 2567293 2567298, overlap 2567298 CGGGCTGATGGGAAA CACAACGCCCGC ACGAC GCGGGCGTTGCG TCTTCCGTACCGAGG TERM 2021 2567321 - 2567293 - gT 100 -18.9 -3.59979 | opp_overlap 2567293 2567298, overlap 2567298 CGGGCTGATGGGAAA CACAACGCCCGCA CGA CGCGGGCGTTGCG TCTTCCGTACCGAGG TERM 2022 2567298 - 2567316 + GT 73 -13.1 -3.19522 | opp_overlap 2567293 2567298, overlap 2567293 TGATGGGAAACACAA CGCCCGC ACGAC GCGGGCG TTGCGTCTTCCGTAC TERM 2023 2567316 - 2567298 - gT 86 -13.8 -3.82946 | opp_overlap 2567298 2567293, overlap 2567293 TGATGGGAAACACAA CGCCCGCA CGA CGCGGGCG TTGCGTCTTCCGTAC Ajs_2419 2567820 - 2567341 - | AsnC family transcriptional regulator Ajs_2418 2566862 - 2567392 + | hypothetical protein TERM 2024 2568943 - 2568893 - g 76 -8.2 -4.26076 | gap 1, overlap 2568894 CCAGGCCTACCAAAA GCGCTGC-CCGCGCGTGATCGAC TACTGC ATCGATCTGGCGCGCCGCAGCGG CCACCGCCTGATGAT TERM 2025 2570839 - 2570815 - g 81 -12.1 -3.76224 | opp_overlap 2570824 CCCGCATCGACGAAA CCGTGGCCCAG GTG CTGGCCCACAG CACGGCCGGCAACGT Ajs_2420 2568027 - 2571602 + | delta-1-pyrroline-5-carboxylate dehydrogenase / L-proline dehydrogenase Ajs_2421 2572273 - 2571668 - | 2',5' RNA ligase TERM 2026 2571946 - 2571909 - G 83 -14.1 -3.77206 | gap 1, overlap 2571940 TACAACGCGATGAAA CCCTGC-TGCCCGTCGGC GGG GCCGCAGAGCACGCAGGG CCGCTTGGCCTGCGG Ajs_2422 2572688 - 2573470 + | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein TERM 2027 2573655 - 2573617 - g 70 -10.8 -3.53012 | overlap 2573619 TGCGCCTGGGGCAAA GACGGCGGCACGCTGCAG CGC CTGCTGCCCGCGGCCGTG CTGACGCTGGCCGTC TERM 2028 2573653 - 2573619 - g 73 -13.4 -3.34398 | overlap 2573617 CGCCTGGGGCAAAGA CGGCGGCACGCTGCAG CGC CTGCTGCCCGCGGCCG TGCTGACGCTGGCCG Ajs_2423 2573488 - 2574534 + | polysulphide reductase, NrfD Ajs_2424 2574635 - 2577829 + | molydopterin dinucleotide-binding region TERM 2029 2577885 - 2577906 + F 100 -15.9 -5.626 | opp_overlap 2577885 GTCCTGAATGGAAAA GCCCATCGC AACT GCGATGGGC TTTTTTTATCAGCTG TERM 2030 2577906 - 2577885 - f 100 -15.9 -4.27316 | opp_overlap 2577885 GTCCTGAATGGAAAA GCCCATCGC AACT GCGATGGGC TTTTTTTATCAGCTG TERM 2031 2578568 - 2578558 - g 71 -3.2 -4.62783 | GAGGGAGCTGAAAAA CACA ATG TGCG CATGGGTTTACTCGA TERM 2032 2579203 - 2579174 - g 75 -13.7 -3.27476 | gap 1, opp_overlap 2579167, overlap 2579170 ATTCTCAAGCACCAA GGTGCTCTTGGCCA CTT TGACCAAG-GCACC CTAGGGAAAATTCAC Ajs_2425 2578382 - 2579275 + | hypothetical protein TERM 2033 2579738 - 2579720 - g 79 -3.1 -5.09426 | opp_overlap 2579722, overlap 2579722 CTGAATTTCAAAAAA GAGCATG GGATG CATTCTC CAGATCGCCGTATGT Ajs_2426 2579272 - 2581842 + | DEAD/DEAH box helicase domain-containing protein Ajs_2427 2581835 - 2582134 + | hypothetical protein Ajs_2428 2585202 - 2582635 - | helicase c2 TERM 2034 2582981 - 2583023 + g 77 -11.1 -3.76492 | opp_overlap 2582981 2582980 2582992 CCGCCCTCGGTAAAG CGGGCGAGGAAGGCGGCGC GGCTG GCGTCGTCCATCTCGCGCG TTTGCTGCCATTGGG TERM 2035 2583682 - 2583726 + g 73 -13.4 -3.30124 | GCGCGCGGGTGCGGT GGCGCCGGCGTGCGATGCGC CGGGT GCGCCTGGCGTGCCAGCGTC TTCTGCGGCCTGGCC TERM 2036 2584346 - 2584318 - G 86 -8.2 -4.72272 | gap 1, opp_overlap 2584336 2584341 2584342, overlap 2584320 GGCGGTGAGGAAAAA CA-GCTTGTCCAG CCCG CTGGGCAAGCGTG GCGCGCTCTCTTTTT TERM 2037 2584343 - 2584320 - G 79 -11 -3.98256 | opp_overlap 2584336 2584341 2584342, overlap 2584318 CGGTGAGGAAAAACA GCTTGTCCAG CCCG CTGGGCAAGC GTGGCGCGCTCTCTT TERM 2038 2584699 - 2584658 - G 81 -10.7 -4.13767 | gap 1, opp_overlap 2584673 GCGGGCAGCGGAAAA CGCAGCAGCGCCAGGGCCGC GTT GCGCTGCTGGCGGTGC-GCG GCTTCGCTGTGCGCC Ajs_2429 2586884 - 2585199 - | hypothetical protein TERM 2039 2585760 - 2585745 - G 70 -3.9 -4.52589 | GTTCTCCACATAAAA CACCG GTGCCT CGGCG CAGTGCCAGTGCGCG Ajs_2430 2587951 - 2586950 - | hypothetical protein TERM 2040 2587631 - 2587648 + g 75 -9.1 -4.08144 | opp_overlap 2587618, overlap 2587634 TACGCGCTGCAGCCC CAGGGCG CTCA CGCCTTG TTTCTGATTGGTCAG TERM 2041 2588015 - 2588033 + H 72 -11.7 -3.26471 | opp_overlap 2588014 2588012 TACAGTCAATGATAC CGGCGCA GCGGG TGCGCCG TTAATGTGGGGATAA TERM 2042 2588717 - 2588689 - g 77 -13.1 -3.62046 | CCATCTGCGCAAGAA GCTCGGCGCCGAT GTG ATCGACACCGTGC GGGGCCTGGGCTTTC Ajs_2431 2588090 - 2588767 + | two component transcriptional regulator TERM 2043 2590151 - 2590179 + G 71 -15.2 -2.52676 | overlap 2590169 CGCTGACGCTGGAAC CGGCCGAGCCCG GCCTG CGGGCGCGGCTG TGCCTTCCGGCGCTG Ajs_2432 2588764 - 2590224 + | integral membrane sensor signal transduction histidine kinase TERM 2044 2590797 - 2590815 + G 74 -5.8 -4.55287 | CGCGCGAGGCCCAGT CGCCCCAG TCA CAGGTGCG TTTTCTGTGGGTGAA Ajs_2433 2590232 - 2591065 + | redoxin domain-containing protein TERM 2045 2591127 - 2591089 - T 72 -12.4 -3.34398 | gap 1, opp_overlap 2591120, overlap 2591032 2591069 2591087 CCGCTGGCGCAAAGA GGTGCGCCGC-CGGCAT CACGAC ATGCCCTGCGGCGCGCC AGCCCCTTTCAGGAA Ajs_2434 2592006 - 2591104 - | beta-lactamase domain-containing protein Ajs_2435 2592114 - 2592437 + | ArsR family transcriptional regulator TERM 2046 2592722 - 2592737 + G 72 -8.2 -4.07687 | TGGTCATCGTGCTGG CCGGCC TGCT GGTCGG TTTTGGCACCCGGCT Ajs_2436 2592442 - 2592885 + | protein of unknown function DUF395, YeeE/YedE Ajs_2437 2592908 - 2593330 + | protein of unknown function DUF395, YeeE/YedE TERM 2047 2593765 - 2593787 + G 70 -8.4 -3.89822 | GGAACGCGTTCGCCG TGCTGGTGCT GCT GGCACTGGCA TTTCTGACCTCGATG TERM 2048 2593988 - 2594012 + G 73 -13.5 -3.28912 | overlap 2593990 CATCCACAGCCTGCT GGGCGCCACCG TTG CGGTGGCGCTG TTCGTGTCGATGTGG TERM 2049 2593990 - 2594010 + G 86 -18.3 -3.20841 | overlap 2593988 TCCACAGCCTGCTGG GCGCCACCG TTG CGGTGGCGC TGTTCGTGTCGATGT Ajs_2438 2593428 - 2594051 + | hypothetical protein Ajs_2439 2594703 - 2594056 - | hypothetical protein TERM 2050 2594509 - 2594521 + g 75 -3.3 -4.74504 | overlap 2594476 GGCACTCGCGGGCGC CACCG TCA CGGTC TTTTTCCCTTCGGAT Ajs_2440 2595657 - 2594959 - | negative transcriptional regulator Ajs_2441 2596410 - 2595829 - | TetR family transcriptional regulator Ajs_2442 2596517 - 2597845 + | beta-ketoacyl synthase TERM 2051 2598230 - 2598268 + G 72 -11.6 -3.53444 | CGTCTCAAGCGCAAC GCCACGGCCATCTACCAG GAC CTGGTCGATGTCCACGGC TTTGCCGGCCAGTAC TERM 2052 2599269 - 2599287 + G 70 -11.7 -3.48276 | GCATCGTCGGCCTGG TGCGCCG ATATC CGGCGCA TTGTGTCAACGCCGC Ajs_2443 2597939 - 2599534 + | integrase catalytic subunit Ajs_2444 2599531 - 2600295 + | IstB ATP binding domain-containing protein Ajs_2445 2600689 - 2600249 - | hypothetical protein Ajs_2446 2601488 - 2600829 - | hypothetical protein TERM 2053 2601137 - 2601148 + g 77 -7.2 -4.44245 | TAACGTTGAGAATCT CGGC CATT GCCG TTTTATCGATCGTGT Ajs_2447 2602572 - 2601481 - | hypothetical protein TERM 2054 2602585 - 2602643 + r 70 -9.89999 -3.64431 | gap 3, opp_overlap 2602591 2602592, overlap 2602586 2602591 CATGTTTCTCTCCTT -CAA--AAATGCATAGGACCCGTCTGCC TTCACT GGCGGACGGGTCCTATGCGTTGGGTTGG TTGTATGTAGTGTTC TERM 2055 2602586 - 2602639 + r 89 -16.8 -3.52717 | opp_overlap 2602591 2602592, overlap 2602585 2602591 ATGTTTCTCTCCTTC AAAAATGCATAGGACCCGTCTGCC TTCACT GGCGGACGGGTCCTATGCGTTGGG TTGGTTGTATGTAGT TERM 2056 2602634 - 2602591 - R 100 -21.1 -4.56597 | opp_overlap 2602591 2602586 2602585, overlap 2602592 TCTCTCCTTCAAAAA TGCATAGGACCCGTCTGCC TTCACT GGCGGACGGGTCCTATGCG TTGGGTTGGTTGTAT TERM 2057 2602591 - 2602634 + r 100 -25.5 -3.25758 | opp_overlap 2602591 2602592, overlap 2602586 2602585 TCTCTCCTTCAAAAA TGCATAGGACCCGTCTGCC TTCACT GGCGGACGGGTCCTATGCG TTGGGTTGGTTGTAT TERM 2058 2602633 - 2602592 - R 100 -24.6 -3.33744 | opp_overlap 2602591 2602586 2602585, overlap 2602591 CTCTCCTTCAAAAAT GCATAGGACCCGTCTGCC TTCACT GGCGGACGGGTCCTATGC GTTGGGTTGGTTGTA Ajs_2448 2603685 - 2602657 - | hypothetical protein TERM 2059 2603354 - 2603373 + g 79 -7.8 -4.57353 | ACCGCATTCACACGG CGTACCCG ATTG CCGGTACG TTTTGTGTAGTGCGC TERM 2060 2603753 - 2603718 - R 89 -14.9 -3.88787 | gap 1, opp_overlap 2603719 2603721 2603725, overlap 2603721 2603725 TCACATCCCCACAAA GCACAAAGCCCTCACC GCAAT GGCGAGGGCTTTGT-C TTGTATGTGAATGAA TERM 2061 2603719 - 2603753 + r 81 -13.6 -3.60525 | opp_overlap 2603718 2603721 2603725, overlap 2603721 2603725 CACATCCCCACAAAG CACAAAGCCCTCACCG CAA TGGCGAGGGCTTTGTC TTGTATGTGAATGAA TERM 2062 2603751 - 2603721 - R 90 -17.7 -3.01422 | opp_overlap 2603721 2603719 2603725, overlap 2603718 2603725 CATCCCCACAAAGCA CAAAGCCCTCACC GCAAT GGCGAGGGCTTTG TCTTGTATGTGAATG TERM 2063 2603721 - 2603751 + r 88 -16.2 -3.37912 | opp_overlap 2603718 2603721 2603725, overlap 2603719 2603725 CATCCCCACAAAGCA CAAAGCCCTCACCG CAA TGGCGAGGGCTTTG TCTTGTATGTGAATG TERM 2064 2603725 - 2603747 + r 89 -11.2 -4.3277 | opp_overlap 2603721 2603718 2603725, overlap 2603721 2603719 CCCACAAAGCACAAA GCCCTCACCG CAA TGGCGAGGGC TTTGTCTTGTATGTG TERM 2065 2603747 - 2603725 - R 89 -12.7 -4.17701 | opp_overlap 2603725 2603721 2603719, overlap 2603721 2603718 CCCACAAAGCACAAA GCCCTCACC GCAAT GGCGAGGGC TTTGTCTTGTATGTG Ajs_2449 2604804 - 2603815 - | hypothetical protein Ajs_2450 2605200 - 2604823 - | hypothetical protein TERM 2066 2605194 - 2605168 - G 100 -10.7 -5.08824 | TCCTGACGTAAAAAA GCGCCCAGGGC ACGAA GCCAAGGGCGC TGACATGAGGGACAA Ajs_2451 2605665 - 2606975 + | hypothetical protein Ajs_2452 2608137 - 2607034 - | hypothetical protein Ajs_2453 2609372 - 2608143 - | helix-turn-helix domain-containing protein TERM 2067 2608853 - 2608829 - G 91 -11.4 -4.28548 | ACCGACGCATGAAAA CAGGCGTCGC GCCGA GCGACACCCG TGCGAGAAAGTCTTT Ajs_2454 2609674 - 2609369 - | hypothetical protein Ajs_2455 2611377 - 2609863 - | transposase IS66 Ajs_2456 2611769 - 2611458 - | IS66 Orf2 family protein Ajs_2457 2612242 - 2611790 - | transposase IS3/IS911 family protein TERM 2068 2612021 - 2612008 - G 70 -5.9 -4.18934 | CAGCATCCGAACAAA CGCCC GGTT GAGCG CGCACAGGGCCCGCC Ajs_2458 2614649 - 2612889 - | UvrD/REP helicase Ajs_2459 2616466 - 2614646 - | hypothetical protein Ajs_2460 2617934 - 2616693 - | phage integrase family protein TERM 2069 2618124 - 2618098 - R 100 -15.3 -5.80003 | opp_overlap 2618101 TTAACAAAGAAAAAA GGCGTTCATTG GACTT CAATGAACGCC TTAGGACAGTGTAAT Ajs_2461 2619208 - 2618531 - | phosphoglycolate phosphatase TERM 2070 2618825 - 2618815 - G 72 -8.2 -4.09685 | overlap 2618816 CCGCATTGGCGAAAA GCGC CAC GCGC TGGGCGATGAGCGAG Ajs_2462 2619918 - 2619205 - | 3-demethylubiquinone-9 3-methyltransferase TERM 2071 2619975 - 2619960 - R 100 -11.8 -5.66684 | opp_overlap 2619960 TAAGGCATAAAAAAA GCCCCG TTGC CGGGGC TTTTTTGTGACCGAT TERM 2072 2619960 - 2619975 + r 100 -11.8 -5.24531 | opp_overlap 2619960 TAAGGCATAAAAAAA GCCCCG TTGC CGGGGC TTTTTTGTGACCGAT Ajs_2463 2620654 - 2619998 - | OmpA/MotB domain-containing protein TERM 2073 2620694 - 2620676 - H 78 -6.6 -4.56597 | overlap 2620677 2620678 CCTCTTGGGGAAAAA GCCGCAGC CGC GCTGCGAA TCAGGGACGTCGTCA TERM 2074 2620867 - 2620849 - g 70 -5.9 -4.18018 | GCGTTGCACCTAAAA TGGCCGC TTCCT GCCGCCA CCCCTCCGTCGACAT Ajs_2464 2620848 - 2623514 + | DNA gyrase subunit A TERM 2075 2623566 - 2623534 - f 84 -16.4 -3.09823 | opp_overlap 2623532 2623532, overlap 2623529 GCTTCCAAAACGATA GCTGCCAGCGCTTG TCAGT CAAGCACTGACAGC ACATTTGACCCATGA Ajs_2465 2623578 - 2624693 + | phosphoserine aminotransferase TERM 2076 2625297 - 2625266 - g 71 -15.2 -2.57132 | opp_overlap 2625264 2625262, overlap 2625265 GTGGGCGTGGAGAAC TCCAACGAGGGCGT GGTC ACGCGCTCGCTGGA CATGTTCCTGCACAC TERM 2077 2625750 - 2625766 + G 70 -10.1 -3.64703 | opp_overlap 2625745 2625746 CCTTGAAGAAGCACG GCGTGTC CAT GACGCGC TTTGAATCCCGCCCC Ajs_2466 2624810 - 2625925 + | chorismate mutase / prephenate dehydratase Ajs_2467 2625935 - 2626819 + | prephenate dehydrogenase TERM 2078 2628487 - 2628450 - g 76 -14.7 -3.14564 | gap 1, opp_overlap 2628475 GCAGGCCGGCATGAA CGCCTCGCGCGTGTCGGC GCT GCCGGC-CGTGCGCGGCG CCCTGGTCGCGCTGC TERM 2079 2628475 - 2628510 + G 74 -12.6 -3.54424 | gap 1, opp_overlap 2628450 GTGTCGGCGCTGCCG GCCGTGC-GCGGCGC CCTGGTC GCGCTGCAGCATGGC TTTCGCCGCCTGCCG Ajs_2468 2626819 - 2628840 + | bifunctional 3-phosphoshikimate 1-carboxyvinyltransferase/cytidine monophosphate kinase TERM 2080 2629481 - 2629463 - g 72 -6.7 -4.25256 | TCCGTACGAAAACAA GACCCTG GAGTT CAAGGTC ATCAAGCTGGACCGC TERM 2081 2630694 - 2630639 - g 72 -5.4 -4.4078 | gap 2, overlap 2630640 GTCCGCGAAGGAAAA CGCCGGTACCA-CCAGCCTGG-GCGC CCTGCT GCGCGCCAAGCTGGACAACTCCGACA AGTAATCCGTCGCGG rpsA 2629014 - 2630699 + | 30S ribosomal protein S1 TERM 2082 2630790 - 2630764 - f 93 -19.5 -2.97747 | overlap 2630766 GCGGCACACCACACA CAGCGGGCGCT CTGGT AGCGCCCGCTG TCACATCAACCTCTG TERM 2083 2630788 - 2630766 - f 84 -16.3 -3.04269 | overlap 2630764 GGCACACCACACACA GCGGGCGCT CTGGT AGCGCCCGC TGTCACATCAACCTC Ajs_2470 2630821 - 2631132 + | integration host factor, beta subunit TERM 2084 2631141 - 2631173 + F 72 -2 -4.74103 | gap 2, overlap 2631143 GCAATAAAACCATAG CTGTTC-A-CGCTTGC TGG GCAGGCGCTAGAGCCG TTTTTGGCTTGAGGC TERM 2085 2631277 - 2631295 + G 100 -11 -5.79526 | ATGAAATACCTCCTG TGGCTGCT CAA GGCAGCCA TTTTTTTTACCCTGT Ajs_2471 2631262 - 2631594 + | hypothetical protein Ajs_2472 2631584 - 2632741 + | hypothetical protein Ajs_2473 2632750 - 2633094 + | hypothetical protein TERM 2086 2634841 - 2634804 - g 81 -16.3 -3.15579 | gap 1, opp_overlap 2634804, overlap 2634793 GCAAGGCCGCATCAA CGCCGC-CCCACTGATGC ACC GCGTCAGCGGACGCGGCG TGTTCGAGGCAGTGC TERM 2087 2634804 - 2634841 + G 72 -14.1 -3.02144 | gap 1, opp_overlap 2634793 2634804 GCAAGGCCGCATCAA CGCCGC-CCCACTGATGC ACC GCGTCAGCGGACGCGGCG TGTTCGAGGCAGTGC TERM 2088 2635306 - 2635256 - g 80 -13.9 -3.74747 | opp_overlap 2635301 CCAAGCGCGACGAAA GCCTGC-CCGCCTCGCCCGCCAGCG CCG CGCTGGCGCGC-ACGCGGCGCGTGC GCGACCTGCTGCTGG Ajs_2474 2633206 - 2636160 + | putative monovalent cation/H+ antiporter subunit A Ajs_2475 2636160 - 2636525 + | putative monovalent cation/H+ antiporter subunit C TERM 2089 2637270 - 2637296 + G 100 -19.4 -3.04792 | TGGTGCCGGCCTACA GCGCGGCCACGG CGC CCGTGGGCGCGC TGTTCGCCCTGATGA Ajs_2476 2636522 - 2638258 + | putative monovalent cation/H+ antiporter subunit D Ajs_2477 2638255 - 2638746 + | putative monovalent cation/H+ antiporter subunit E Ajs_2478 2638743 - 2639024 + | multiple resistance and pH regulation protein F Ajs_2479 2639021 - 2639389 + | Na+/H+ antiporter subunit TERM 2090 2639443 - 2639404 - T 72 -7.3 -4.18197 | gap 1, opp_overlap 2639407 2639408, overlap 2639408 ATTTGCTATTGAAAA TATAGCTACTAGCACTTG ACCAG CAAGCGCTAG-AGCCTTA TTTCACTCAAACCCA Ajs_2480 2643212 - 2639460 - | 5-oxoprolinase (ATP-hydrolyzing) TERM 2091 2643550 - 2643603 + G 71 -13.8 -2.84878 | gap 1, overlap 2643550 CGTGGATTGCACCCA GGTGGTGCAGGCCCGCGTG-CGCTA CCCGC TGGCGGCGCACGGGCCTGCACAGCG CTTTCGGTTGGAGGC TERM 2092 2643550 - 2643604 + G 79 -13.6 -3.75153 | gap 2, overlap 2643550 CGTGGATTGCACCCA G-GTGGTGCAGGCCCGCGTG-CGCTA CCCGC TGGCGGCGCACGGGCCTGCACAGCGC TTTCGGTTGGAGGCC TERM 2093 2644097 - 2644063 - g 70 -12.9 -3.02144 | gap 2, overlap 2644066 2644068 GGAGTTCTTCCAACA GC-AC-AGCGGCCGCCC CGT GGGCGACCGCCGGTTGC AGCCCGGGCAGATCG TERM 2094 2644092 - 2644066 - g 93 -19.4 -2.73875 | overlap 2644063 2644068 GTTCTTCCAACAGCA CAGCGGCCGCCC CGT GGGCGACCGCCG GTTGCAGCCCGGGCA TERM 2095 2644090 - 2644068 - g 89 -18.4 -2.9155 | overlap 2644066 2644063 TCTTCCAACAGCACA GCGGCCGCCC CGT GGGCGACCGC CGGTTGCAGCCCGGG Ajs_2481 2643299 - 2645122 + | hypothetical protein Ajs_2482 2645746 - 2645168 - | putative transcriptional regulator TERM 2096 2646196 - 2646177 - g 71 -12.1 -3.25823 | GGCGCCCGAGATCAA GCGCGCC GTGCAG GGCGCGC AGGCGCAGCTCGGCG Ajs_2483 2645950 - 2646927 + | TRAP dicarboxylate transporter- DctP subunit Ajs_2484 2646965 - 2647474 + | tripartite ATP-independent periplasmic transporter DctQ Ajs_2485 2647490 - 2648794 + | TRAP dicarboxylate transporter, DctM subunit Ajs_2486 2648837 - 2649232 + | camphor resistance protein CrcB Ajs_2487 2649364 - 2650227 + | hypothetical protein Ajs_2488 2651469 - 2650282 - | major facilitator superfamily transporter Ajs_2489 2653171 - 2651471 - | hypothetical protein Ajs_2490 2654215 - 2653235 - | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding Ajs_2491 2655710 - 2654295 - | putative transmembrane protein TERM 2097 2655186 - 2655147 - G 72 -13.5 -3.19157 | GAGGAAGCCCAGGAA CAGCGGCGGATCGCCCA GCGGCG TGAGCGAGCCGCCGGCG TTGGAGACGATGAAG Ajs_2492 2656971 - 2655775 - | nicotinate phosphoribosyltransferase TERM 2098 2657148 - 2657130 - R 75 -11.6 -3.6502 | CAGCCCTCAGGGAAA GCCGGCGC GCC GCGCCCGC GATCAACGCGCCACG Ajs_2493 2657639 - 2657151 - | thioesterase superfamily protein TERM 2099 2657783 - 2657769 - H 78 -6.4 -4.56775 | AGTTGCCCCTAAAAA TGCTGC ATT GCAACA AAAAAGCTTGCGCCT Ajs_2494 2657909 - 2658472 + | phasin family protein TERM 2100 2658617 - 2658635 + F 100 -14.6 -5.75342 | CCTGGATCCCTTCAA GCCCAGTC CCT GACTGGGC TTTTTTTTGGGCGGA TERM 2101 2660177 - 2660199 + F 74 -14.9 -2.50816 | opp_overlap 2660177, overlap 2660176 2660179 GGCCCCAAGTGAAAA CACCGCCTG AGGTG CAGGCGGTG CTTGGTGGGTGCAGC TERM 2102 2660199 - 2660177 - f 100 -14.9 -4.27316 | opp_overlap 2660176 2660177 2660179 GGCCCCAAGTGAAAA CACCGCCTG AGGTG CAGGCGGTG CTTGGTGGGTGCAGC TERM 2103 2660278 - 2660305 + F 71 -12.6 -3.0701 | overlap 2660268 TGCCAGACGTGGCAA TGCCCCGGGCAC CATG GCGCCCAGGGCA TTGGGTGCGGATTAT Ajs_2496 2660419 - 2661309 + | peptidase M23B Ajs_2497 2661306 - 2661956 + | ribosomal large subunit pseudouridine synthase E TERM 2104 2663049 - 2663093 + G 73 -13.5 -3.28712 | gap 1 AGCGACATTGCCGAG GCCGAGCGCCTGGCCGACGC CTGGAA GCC-CGGCCAGCCGCTGGGC TTCTAGCGCGGCACG Ajs_2498 2662059 - 2663099 + | Sel1 domain-containing protein Ajs_2499 2663835 - 2663161 - | hypothetical protein TERM 2105 2663622 - 2663602 - G 77 -3.8 -4.82901 | opp_overlap 2663602 2663604, overlap 2663604 CGTTTCGGAGAAAAA GCCCGCGG GCTTG CTGCCGGC CGTCTTGTCCTGGTG TERM 2106 2663919 - 2663933 + r 78 -3.5 -5.0916 | gap 1, opp_overlap 2663899, overlap 2663918 CAGCGCTTGAGGGAC GCGCGC TAGA GCG-GC TTTTTGTCTTGAACC Ajs_2500 2664826 - 2663924 - | transporter DMT superfamily protein TERM 2107 2664574 - 2664563 - G 81 -5.8 -4.82901 | overlap 2664565 CGGCGCCCATAAAAA CAGC CACA GCTG CACGCCCAGCATGGC TERM 2108 2664890 - 2664862 - H 85 -14.5 -3.56836 | overlap 2664850 AAACGATGCGGGAAA CCCGGCGACGACA CAG CGTCGCCGCCGCG GGCAAGACACGAGAG TERM 2109 2665087 - 2665107 + H 77 -2.6 -5.02074 | gap 2, opp_overlap 2665064 AGGCCGCGCCGGCAT TGGGC--TGC AGC GCATCGCCCA TTTTTTAGGCAATCG TERM 2110 2665310 - 2665328 + G 100 -11.6 -4.42619 | overlap 2665309 ACCGCCACTGCCACC GCGCCGCG CCG CGCCGCGC TTTTATCCGCTCTTC TERM 2111 2665508 - 2665538 + G 72 -11.9 -3.53012 | gap 2, opp_overlap 2665524, overlap 2665509 2665511 CCAGGCCTTCGGCCA GCGC-G-CGCGCCAG AAC CTGGCGCGCCTGTGC TTTCGCCAGCAGGCC TERM 2112 2665509 - 2665535 + G 76 -15.8 -2.90496 | opp_overlap 2665524, overlap 2665508 2665511 CAGGCCTTCGGCCAG CGCGCGCGCCAG AAC CTGGCGCGCCTG TGCTTTCGCCAGCAG TERM 2113 2665511 - 2665533 + G 74 -14.8 -3.00525 | opp_overlap 2665524, overlap 2665509 2665508 GGCCTTCGGCCAGCG CGCGCGCCAG AAC CTGGCGCGCC TGTGCTTTCGCCAGC Ajs_2501 2665191 - 2665808 + | nuclease Ajs_2502 2666796 - 2665849 - | phosphoesterase, DHHA1 TERM 2114 2665975 - 2665927 - G 81 -15.2 -3.61178 | gap 1, overlap 2665897 GCCAGGCAGGCGAAA GCCGCAGGCC-TGGGCATGGCCG CCGC CGCCCATGCTCACGGCCAGGGGC GAGCAGTCGTAGCCG Ajs_2503 2666935 - 2667204 + | hypothetical protein Ajs_2504 2667313 - 2667600 + | hypothetical protein Ajs_2505 2667597 - 2668403 + | tRNA pseudouridine synthase C TERM 2115 2668400 - 2668438 + F 86 -6.6 -4.96848 | opp_overlap 2668400 2668398 2668403, overlap 2668401 TTCGCTTCCAAAAGA GTAGCTTGTAGCGCTTAC CTA GCAAGCGCTACCGGCCAA TTTTTATCTAACGCC TERM 2116 2668401 - 2668437 + F 70 -10.1 -3.57627 | opp_overlap 2668400 2668398 2668403, overlap 2668400 TCGCTTCCAAAAGAG TAGCTTGTAGCGCTTAC CTA GCAAGCGCTACCGGCCA ATTTTTATCTAACGC TERM 2117 2668435 - 2668403 - f 70 -12.7 -2.93623 | opp_overlap 2668401 2668400, overlap 2668400 2668398 GCTTCCAAAAGAGTA GCTTGTAGCGCTTAC CTA GCAAGCGCTACCGGC CAATTTTTATCTAAC Ajs_2506 2668628 - 2669197 + | MgtC/SapB transporter Ajs_2507 2669252 - 2669461 + | hypothetical protein Ajs_2508 2669620 - 2671614 + | hypothetical protein Ajs_2509 2671700 - 2672173 + | OsmC family protein Ajs_2510 2673176 - 2672217 - | GTP-binding protein, HSR1-related TERM 2118 2672244 - 2672291 + g 70 -10.2 -3.71672 | overlap 2672236 2672240 CCGCGGGGCGTTGCG CGCGCGGCGCTCGTTGCGGCGC AGCT GCTCGGCCTTGCGCGCGGCGCG TTCCTTTTCCTGCAC Ajs_2511 2673233 - 2673454 + | hypothetical protein Ajs_2512 2673470 - 2673679 + | hypothetical protein Ajs_2513 2675512 - 2673752 - | arsenite-activated ATPase ArsA Ajs_2514 2675566 - 2675949 + | ArsR family transcriptional regulator Ajs_2515 2675972 - 2676457 + | glyoxalase/bleomycin resistance protein/dioxygenase Ajs_2516 2676475 - 2676972 + | protein tyrosine phosphatase Ajs_2517 2676974 - 2678056 + | arsenical-resistance protein Ajs_2518 2678046 - 2679239 + | major facilitator superfamily transporter Ajs_2519 2680203 - 2679286 - | LysR family transcriptional regulator TERM 2119 2679661 - 2679702 + g 73 -10.8 -3.73647 | gap 1 GGCAGGGGTCTCGAT GCGGTGGCGGGTGCGCAGC GCGGG GCTGCACACCGGC-ACCAC TTCTTCGTGCATCAG TERM 2120 2679876 - 2679850 - G 72 -11.4 -3.54424 | overlap 2679854 GTGCAGCGCGGCAAA CGCAGGCAGGCG CGG CACCAGCCAGCG CGCGCCCAACGTGGG Ajs_2520 2680417 - 2682114 + | acetolactate synthase 2 catalytic subunit TERM 2121 2682279 - 2682243 - T 76 -5.7 -4.53398 | overlap 2682245 CAACATCAAAAAGAA TAGCTGGCGGCGCTTAC GCC ATAAGCGCTGCCCTCAA AAAACTACCCCAACT TERM 2122 2682277 - 2682245 - T 71 -8.3 -3.8493 | overlap 2682243 ACATCAAAAAGAATA GCTGGCGGCGCTTAC GCC ATAAGCGCTGCCCTC AAAAAACTACCCCAA Ajs_2521 2683816 - 2682284 - | glutamate-cysteine ligase TERM 2123 2683361 - 2683325 - G 72 -11.5 -3.62096 | opp_overlap 2683328, overlap 2683328 GCGGATCAGCGCAAA GTACTCGTCGCTGCCCA CGC CGGGCAGCGACCAGTTG TAGTGAATGCCCGAG TERM 2124 2683328 - 2683358 + g 87 -16.9 -3.4252 | opp_overlap 2683328 2683325 GATCAGCGCAAAGTA CTCGTCGCTGCCC ACGCC GGGCAGCGACCAG TTGTAGTGAATGCCC TERM 2125 2683358 - 2683328 - G 86 -17.6 -2.93089 | opp_overlap 2683328, overlap 2683325 GATCAGCGCAAAGTA CTCGTCGCTGCCCA CGC CGGGCAGCGACCAG TTGTAGTGAATGCCC TERM 2126 2683820 - 2683834 + r 78 -3.5 -5.0538 | GAGTGTGCTCATGGT GGTGG TTGTT CCATC TTTTTTGAGGTGGGG Ajs_2522 2684900 - 2683989 - | short-chain dehydrogenase/reductase SDR TERM 2127 2685009 - 2684985 - R 83 -9.1 -4.33417 | overlap 2684987 CGCAGCGAGAAGAAA TAGCCCCGGCC GAT GACCGGGGCGC TTCAAAGGATACAGG TERM 2128 2685007 - 2684987 - R 93 -16.1 -3.76888 | overlap 2684985 CAGCGAGAAGAAATA GCCCCGGCC GAT GACCGGGGC GCTTCAAAGGATACA ligD 2687617 - 2685104 - | ATP-dependent DNA ligase Ajs_2524 2688691 - 2687648 - | Ku domain-containing protein TERM 2129 2689116 - 2689083 - R 91 -12.4 -4.3467 | opp_overlap 2689089, overlap 2689085 2689086 ATTTTTAGAGCAAAA GACCAACGCCCGGT GTTCAG ACCGGGCGTTGTGC GGAAGTTGACGGGGG TERM 2130 2689114 - 2689085 - R 84 -13.6 -3.77806 | opp_overlap 2689089, overlap 2689083 2689086 TTTTAGAGCAAAAGA CCAACGCCCGGT GTTCAG ACCGGGCGTTGT GCGGAAGTTGACGGG TERM 2131 2689113 - 2689086 - R 87 -17.1 -2.86202 | opp_overlap 2689089, overlap 2689085 2689083 TTTAGAGCAAAAGAC CAACGCCCGGT GTTCAG ACCGGGCGTTG TGCGGAAGTTGACGG TERM 2132 2689089 - 2689110 + r 74 -13 -3.30159 | opp_overlap 2689086 2689085 2689083 AGAGCAAAAGACCAA CGCCCGGT GTTCAG ACCGGGCG TTGTGCGGAAGTTGA Ajs_2525 2689470 - 2689273 - | hypothetical protein Ajs_2526 2690708 - 2689533 - | putative transcriptional regulator Ajs_2527 2693359 - 2690690 - | hypothetical protein Ajs_2528 2694567 - 2693356 - | hypothetical protein TERM 2133 2693889 - 2693872 - G 71 -12.7 -3.28712 | GGGGTCGTTGTAGAA CGCTCGC TGGA GCGAGCG CAACAGCAGATTGCT TERM 2134 2694064 - 2694019 - G 76 -2.3 -4.93968 | gap 1, opp_overlap 2694039 2694062 ATCGAGAACGAAAAA GTCCCCGGCCTCAATCGCGCGG CGG CC-CGCCTCTATGGGCTGGGAC TGGCGCAAGCCGGTC Ajs_2529 2696614 - 2694560 - | hypothetical protein TERM 2135 2695286 - 2695275 - G 72 -7.2 -4.18018 | overlap 2695276 TCGCCGTAGTTAAAA CCCG GCGT CGGG CCGCTGTCGGCGTTC TERM 2136 2695349 - 2695396 + g 72 -13.4 -3.16881 | gap 1 CTGCTCCATCAGCAG GCTGGCTGCGATGGCCTTCAACG TAT CGTTGACGGCC-TCGGTGACAGC TTCCTCGGCTGCATC Ajs_2530 2699397 - 2696611 - | putative DNA methylase TERM 2137 2697083 - 2697066 - G 73 -11.3 -3.65201 | CAAGATTGCTAATAA TTGCGCC TGAC GGCGCAA AACCTACGGGAAGGT TERM 2138 2697203 - 2697215 + g 75 -4.7 -4.60255 | overlap 2697192 2697190 CAAAGCTTAGCGGTT GCTGC TCG GCTGC TTTTTCGACGCTTGT TERM 2139 2697526 - 2697547 + g 71 -3 -4.57882 | gap 1, overlap 2697526 CGCCGGAACGAGATA GG-CGTTGA TATTC TCGACGGCC TTTATTGTTGTTCCA TERM 2140 2698399 - 2698416 + g 73 -14.1 -3.16742 | opp_overlap 2698398 2698396 CAGGTTGAGCAACAT GCGGGCG TTAT CGCCCGC TTCCTCCAGCTTCGC Ajs_2531 2699656 - 2699456 - | phage transcriptional regulator, AlpA TERM 2141 2700853 - 2700824 - R 72 -13.5 -2.70774 | overlap 2700820 2700823 CACGCCAAGGAGAAG GCCAGAGCGGCCG TCAT CGTCCGATCTGGC GATGCTCGAGCACGC TERM 2142 2700935 - 2700911 - R 78 -15.7 -2.71144 | opp_overlap 2700915, overlap 2700914 CAGGCCCGGGAATGA CAAGGGCGGCC AAT GGCCGCCTTTG CTGCTCCTGGTTCGC TERM 2143 2700932 - 2700914 - R 74 -11.6 -3.50853 | opp_overlap 2700915, overlap 2700911 GCCCGGGAATGACAA GGGCGGCC AAT GGCCGCCT TTGCTGCTCCTGGTT TERM 2144 2700915 - 2700931 + r 90 -15.1 -3.80841 | opp_overlap 2700914 2700911 CCCGGGAATGACAAG GGCGGCC AAT GGCCGCC TTTGCTGCTCCTGGT Ajs_2534 2701185 - 2700955 - | hypothetical protein TERM 2145 2701215 - 2701247 + r 74 -12.6 -3.32963 | overlap 2701216 ACAGGTGGGTTGTGG AAGTGTCGGCCGGC CCCAC GCCGGCCGACGCGC TTATCGGCTGCCGGT TERM 2146 2701216 - 2701246 + r 80 -16.1 -2.59564 | overlap 2701215 CAGGTGGGTTGTGGA AGTGTCGGCCGGC CCCAC GCCGGCCGACGCG CTTATCGGCTGCCGG TERM 2147 2701325 - 2701272 - R 72 -12.2 -3.28712 | gap 1, opp_overlap 2701271 GCCGGTGCCGTAGAA GCCGGCGGCCTCGGCCAGCGGCGTG CTTCT CGCGCTGCTG-CCGTAGCTGCTGGC ATTGCCGCCCGACCT Ajs_2535 2701526 - 2701248 - | hypothetical protein TERM 2148 2701410 - 2701392 - G 70 -6.6 -4.2461 | AGGTCGATCAACAAA GGCCGCAA CTT CTGCCGCC GGGTCTGCATCAGTC Ajs_2536 2703121 - 2701523 - | TrbL/VirB6 plasmid conjugal transfer protein Ajs_2537 2703387 - 2703118 - | putative entry/exclusion protein TrbK TERM 2149 2703357 - 2703377 + g 74 -2.4 -4.73613 | CCACCAGCACCACCA CGAGGCCG GCAAG CAGCATCG TTTTCTTCATGGTGC Ajs_2538 2704188 - 2703403 - | mating pair formation protein TrbJ Ajs_2539 2704801 - 2704430 - | OriT-binding protein, TraJ TERM 2150 2704495 - 2704521 + g 86 -18.1 -3.05384 | opp_overlap 2704511 CATCCTGGGTGGCTT CGATCCTCGCC AGCAA GGCGAGGATCG TTGCATCGCCGAAAC TERM 2151 2704744 - 2704771 + g 71 -9.1 -3.82031 | CGCGTTCTTCTGGAA GGCAGTACACC TTGATC GGTGGGCTGCC TTTCCTGGTGATTCG TERM 2152 2704924 - 2704872 - R 70 -10.6 -3.61398 | gap 1, opp_overlap 2704877, overlap 2704873 2704886 GCCCCGCGCGAATAA GGGACA-GTGAAGAAGGACAACCGG CTTG CCGGTGGGCCTACTTCACATATCCT GCCCGCCTTACGGCG TERM 2153 2704923 - 2704873 - R 72 -14.1 -2.76696 | gap 1, opp_overlap 2704877, overlap 2704872 2704886 CCCCGCGCGAATAAG GGACA-GTGAAGAAGGACAACCGG CTTG CCGGTGGGCCTACTTCACATATCC TGCCCGCCTTACGGC TERM 2154 2704928 - 2704939 + r 81 -7.2 -4.4521 | TTCACATATCCTGCC CGCC TTAC GGCG TTGTTTTTGCCTCGT Ajs_2540 2705399 - 2705121 - | putative OriT-binding protein, TraK TERM 2155 2705868 - 2705833 - R 80 -15 -3.19192 | opp_overlap 2705829 GGGCATCGAATTGAA CTGTTGTATGTTGTAG CGTG CTACAACATACAACAC CTGCCTATTGACACT TERM 2156 2705958 - 2705917 - R 84 -8.6 -4.40963 | gap 1, opp_overlap 2705919, overlap 2705918 2705950 2705951 AGCCGCTAAAAAGAA CCGGCCGGAGCTGACCGCC CTTCT GGCGTACAACTC-GGCCGC AGGCCGACCATCGGC TERM 2157 2705957 - 2705918 - R 70 -12.1 -3.23855 | gap 1, opp_overlap 2705919, overlap 2705917 2705950 2705951 GCCGCTAAAAAGAAC CGGCCGGAGCTGACCGCC CTTCT GGCGTACAACTC-GGCCG CAGGCCGACCATCGG TERM 2158 2706008 - 2705979 - R 72 -13.5 -2.72661 | opp_overlap 2705966, overlap 2705996 2705997 GACCATCGGCAAGGA CTTGGCGTCGCCC TAAA GGGCGGCGGCAAG TGCCGCGCCTAGTGG Ajs_2541 2706982 - 2706113 - | plasmid and phage iteron-binding protein Ajs_2542 2707850 - 2706972 - | replication protein A Ajs_2543 2708108 - 2707854 - | hypothetical protein Ajs_2544 2708170 - 2709159 + | hypothetical protein Ajs_2545 2709239 - 2709484 + | phage transcriptional regulator, AlpA Ajs_2546 2710778 - 2709576 - | phage integrase family protein TERM 2159 2710500 - 2710521 + g 79 -8.6 -4.41047 | overlap 2710488 2710486 2710502 CGTCTCCGCGTCCTT GACGCGGG CCTTGT CCCGCGCC TTTTCCTTGGCCGGT TERM 2160 2710688 - 2710716 + g 77 -16.7 -2.76453 | opp_overlap 2710674 2710706 AGATCGCTCCGGCGG CCGTGACGGCTAC ATA GAGGCCGTCACGG TCATTCACCTTGTAG TERM 2161 2711036 - 2711019 - R 100 -10.5 -5.94597 | opp_overlap 2711019 CAAGATCAAAAAAAA GCCCGCA GTGA CGCGGGC TTAGGTGTGTTTTCG guaA 2712702 - 2711086 - | bifunctional GMP synthase/glutamine amidotransferase protein TERM 2162 2712762 - 2712733 - R 100 -12.1 -4.89567 | CGGTAAAAGACAAAA GGCCCGAACACCT GGAG ACGGGTTCGGGCC TGCGGAATGGCGAAA Ajs_2548 2714255 - 2712780 - | inosine-5'-monophosphate dehydrogenase TERM 2163 2714284 - 2714274 - g 90 -3.2 -5.4477 | AAAGCTCCAAAAAAA GGAT TGT ACCC GCCGCGCGACAAATC TERM 2164 2714681 - 2714667 - g 70 -4.2 -4.44667 | overlap 2714676 GCCGCCAAGAAGAAA GCGG AGGAAGA CCGC GTGGCCAAGGCCCGT Ajs_2549 2714256 - 2714858 + | hypothetical protein TERM 2165 2714882 - 2714912 + T 100 -11.1 -5.08255 | gap 1, opp_overlap 2714874 2714875 CCATAAACGCGCCAC CGGCCGCC-CTTCT GCAT GGATGAGGCGGCCG TTTTGTTTTCAGCGT Ajs_2550 2715288 - 2714944 - | hypothetical protein Ajs_2551 2715721 - 2715281 - | cyclase/dehydrase TERM 2166 2716164 - 2716148 - g 74 -2.1 -4.73388 | overlap 2716149 AAGGTCGAGCAAAAA GGCTACA CCC TGGTGCC GCTGAATCTCCACTG smpB 2715836 - 2716309 + | SsrA-binding protein Ajs_2553 2716408 - 2716773 + | hypothetical protein Ajs_2554 2716790 - 2717305 + | ECF subfamily RNA polymerase sigma-24 factor TERM 2167 2717864 - 2717908 + G 75 -14.2 -3.25823 | gap 1, opp_overlap 2717865, overlap 2717865 GAGGGGTTCGAATTG ATGGGCGGGCG-CCTGCTGCC CGGC GGCAGCGGGGCGCGCGCGCAA TTCATGTACCAGAAC TERM 2168 2717865 - 2717907 + G 85 -17.7 -2.55351 | gap 1, opp_overlap 2717865, overlap 2717864 AGGGGTTCGAATTGA TGGGCGGGCG-CCTGCTGCC CGGC GGCAGCGGGGCGCGCGCGCA ATTCATGTACCAGAA TERM 2169 2717907 - 2717865 - g 73 -15.5 -2.52543 | gap 1, opp_overlap 2717864 2717865 AGGGGTTCGAATTGA TGGGCGGGCG-CCTGCTGCC CGGC GGCAGCGGGGCGCGCGCGCA ATTCATGTACCAGAA Ajs_2555 2717336 - 2718175 + | putative transmembrane anti-sigma factor Ajs_2556 2719217 - 2718126 - | enoyl-CoA hydratase Ajs_2557 2720098 - 2719214 - | hypothetical protein TERM 2170 2719279 - 2719252 - G 70 -6.2 -4.1899 | gap 1, overlap 2719255 GCAGTTCATTGAAAA CGA-GCGCGCCGA TCA CCAGCGCGCCTCC CATCAGCACGGCCGG Ajs_2558 2722136 - 2720307 - | GTP-binding protein TypA Ajs_2559 2723134 - 2722133 - | tRNA pseudouridine synthase B Ajs_2560 2723508 - 2723131 - | ribosome-binding factor A Ajs_2561 2726352 - 2723521 - | translation initiation factor 2 TERM 2171 2725322 - 2725354 + g 74 -12.6 -3.61398 | overlap 2725323 2725330 2725343 TGGTCGTCGCGGTCA TTGCCGCGGCGGCC GCGGG GGCCGCCACGCCAG TTGTTGCGCCCCACG TERM 2172 2726131 - 2726164 + g 75 -4.5 -4.62069 | AGCGTCGGCCTGCTT GATCTCGCTGGTGGA CTTC TTGACCAGGGTGATC TTTTTGCGGTCCCCC Ajs_2562 2727861 - 2726377 - | NusA antitermination factor TERM 2173 2727423 - 2727443 + g 79 -8.3 -4.3739 | overlap 2727424 CGCCCTTGTCCATGC GTTTCACCG TGC CGGTGAAAA TTTTCTCGCCGCGTG Ajs_2563 2728590 - 2727931 - | hypothetical protein TERM 2174 2728631 - 2728613 - R 100 -8.8 -6.07627 | opp_overlap 2728612 2728613, overlap 2728599 ACGCCCAAAAAAAAA GGGCGG TAAGTAC CCGCCC GTTTTGGTCGTGAAG Ajs_2564 2729106 - 2728717 - | hypothetical protein Ajs_2565 2730391 - 2729117 - | cytochrome c, class I Ajs_2566 2731074 - 2730388 - | putative cytochrome c TERM 2175 2730675 - 2730665 - G 70 -8.2 -3.90856 | overlap 2730666 AACCCTGGAATGAAA GGCG CGA CGCC CGCCAGAGCATCGCC Ajs_2567 2731873 - 2731118 - | short-chain dehydrogenase/reductase SDR Ajs_2568 2734209 - 2731915 - | ribonuclease R TERM 2176 2734343 - 2734378 + H 79 -13.4 -3.53722 | opp_overlap 2734328 2734350, overlap 2734350 CCGCCAGGGTTCTGA CAGCAAAGGCCGCTTC ATTT GAAGTGGCCTTTTTTG TTATCTGCGTCTCAA TERM 2177 2734350 - 2734371 + H 100 -12.3 -5.60689 | opp_overlap 2734350, overlap 2734343 GGTTCTGACAGCAAA GGCCGCTTC ATTT GAAGTGGCC TTTTTTGTTATCTGC TERM 2178 2734371 - 2734350 - H 76 -10.1 -3.83026 | opp_overlap 2734343 2734350 GGTTCTGACAGCAAA GGCCGCTTC ATTT GAAGTGGCC TTTTTTGTTATCTGC TERM 2179 2734617 - 2734587 - H 70 -12.7 -2.91269 | opp_overlap 2734592, overlap 2734592 GGCACCAAAGACAAG CAAAAGCCGCTGA TTTTT TCAGCGGCTTTTT TGTTTGTAACGCCCC TERM 2180 2734612 - 2734592 - H 100 -12.6 -4.58724 | opp_overlap 2734592, overlap 2734587 CAAAGACAAGCAAAA GCCGCTGA TTTTT TCAGCGGC TTTTTTGTTTGTAAC TERM 2181 2734592 - 2734612 + H 100 -12.6 -5.72622 | opp_overlap 2734592 2734587 CAAAGACAAGCAAAA GCCGCTGA TTTTT TCAGCGGC TTTTTTGTTTGTAAC Ajs_2569 2734697 - 2735071 + | hypothetical protein Ajs_2570 2735911 - 2735129 - | tRNA/rRNA methyltransferase (SpoU) TERM 2182 2735254 - 2735275 + g 73 -13.7 -3.1505 | gap 1, opp_overlap 2735266 2735267 GCGCACGCTGCTGCA GGGC-GGGCG AAA CGCCCTGCCC TTCGTGGCCCATGAT Ajs_2571 2736571 - 2735942 - | ribonuclease H Ajs_2572 2737703 - 2736546 - | lipid-A-disaccharide synthase TERM 2183 2737122 - 2737086 - GR 87 -18.8 -2.52464 | gap 1, opp_overlap 2737082 2737081 CGGCTTGGCAATGTA GGCCACCTCTGCCGAGC GACT GCCCGGCAG-GATGGCC AGCACTTCATCGTGT Ajs_2573 2738510 - 2737719 - | acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase Ajs_2574 2738968 - 2738528 - | 3-hydroxyacyl-[acyl-carrier-protein] dehydratase TERM 2184 2738952 - 2738967 + g 84 -5.4 -4.96848 | AGGAGTTTGAGAATT TGGTGG ATAT CCATCA TTTTTCTGTGAGCGG TERM 2185 2738977 - 2738992 + r 74 -5.4 -4.55446 | gap 1, overlap 2738980 CCATCATTTTTCTGT GAGCGGC CTA GCCG-TC TTTTCGTGTTTGTTC TERM 2186 2738980 - 2738990 + r 71 -8.2 -3.86037 | overlap 2738977 TCATTTTTCTGTGAG CGGC CTA GCCG TCTTTTCGTGTTTGT Ajs_2575 2739964 - 2738984 - | UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase TERM 2187 2739019 - 2739059 + g 76 -8.2 -4.19577 | gap 1, overlap 2739020 GTTCGAGAGCCTTGA TGCGTTCACGCAGCCGGTA CAGC TGCCG-CAGCGTGGCCGCG TTCTTTTCCCACTTC TERM 2188 2739792 - 2739814 + g 80 -14.8 -3.37796 | opp_overlap 2739787 2739794 GGGGCCACAATGACA CAGGCCGCCT GGG AGGCGGCCAG TTGTGACTGGTAGCG TERM 2189 2739812 - 2739794 - G 77 -16 -3.03474 | opp_overlap 2739792, overlap 2739787 GGCCACAATGACACA GGCCGCCT GGG AGGCGGCC AGTTGTGACTGGTAG Ajs_2576 2740510 - 2739989 - | outer membrane chaperone Skp (OmpH) Ajs_2577 2742807 - 2740510 - | surface antigen (D15) TERM 2190 2742787 - 2742750 - G 70 -2.6 -4.65895 | gap 2, overlap 2742754 CTTGGGAGGCAAAAA CCATGGC-TGCG-AGGGC GGAT GCCGTACGCACGCCCAGG CGATTGATATGTTTT Ajs_2578 2744217 - 2742853 - | peptidase RseP Ajs_2579 2745509 - 2744337 - | 1-deoxy-D-xylulose 5-phosphate reductoisomerase Ajs_2580 2746360 - 2745506 - | phosphatidate cytidylyltransferase TERM 2191 2746108 - 2746076 - G 84 -16.9 -3.15544 | GCCCACGCGCAGCAA GGCGGCCCCGCCCAG CAC CCAGGCAGCGCCGCC CACCAGCCACAGCCA Ajs_2581 2747129 - 2746395 - | undecaprenyl diphosphate synthase TERM 2192 2746469 - 2746452 - G 78 -14.1 -3.53444 | opp_overlap 2746446 GGAGGTTTGGCCAAA GCGGCGC TCGC GCGCCGC GAAGTCCGCGATGGC Ajs_2582 2747718 - 2747158 - | ribosome recycling factor pyrH 2748489 - 2747767 - | uridylate kinase Ajs_2584 2749443 - 2748547 - | translation elongation factor Ts (EF-Ts) TERM 2193 2749500 - 2749521 + r 100 -5.8 -5.40072 | gap 1, opp_overlap 2749500 2749501, overlap 2749500 2749501 GAAGCTAAAAAAAAA G-GGGGCTC ACCAG GGGCCCCGC TTTTTTTGCGACGCA TERM 2194 2749519 - 2749500 - R 100 -4.8 -6.15259 | opp_overlap 2749500 2749500 2749501, overlap 2749501 GAAGCTAAAAAAAAA GGGGGCTC ACCA GGGGCCCC GCTTTTTTTGCGACG TERM 2195 2749519 - 2749501 - R 76 -7.3 -4.26715 | opp_overlap 2749501 2749500 2749500, overlap 2749500 AAGCTAAAAAAAAAG GGGGCTC ACCAG GGGCCCC GCTTTTTTTGCGACG Ajs_2585 2750305 - 2749553 - | SSU ribosomal protein S2P Ajs_2586 2750506 - 2751852 + | amidase TERM 2196 2752501 - 2752548 + G 75 -13.5 -3.36273 | overlap 2752461 TCCGGCAACTGCCGG CTGTTTG-CGCAGATCCTGCGCC ACGC GGCGCAGGAGC-GCGGCGCACAG TTCGTGTTCGGCGCG Ajs_2587 2751904 - 2753151 + | D-amino-acid dehydrogenase TERM 2197 2753328 - 2753346 + F 83 -14.6 -3.51976 | overlap 2753324 GCGTTGCCAAGCCTC GCTGGGGT AGC ACCCCAGC TTCGTTTGGCGCCTT TERM 2198 2753362 - 2753372 + F 72 -2.4 -4.72272 | overlap 2753350 2753349 TTCGTTTGGCGCCTT GCGC CTG GCCC TTTTTGATCGCAACG TERM 2199 2754809 - 2754867 + G 74 -12.4 -3.53012 | GCGGCACCGGTGACG TGCTG-GCCGGCCTGGTGGGGGCGCGGC TGGCC GCGGAGCCTGCAC-AGGCCGGTGCGGCA TTTGCGGCGGCGGGC Ajs_2588 2753452 - 2754978 + | carbohydrate kinase, YjeF related protein Ajs_2589 2755155 - 2755328 + | hypothetical protein TERM 2200 2755353 - 2755368 + T 100 -11.8 -5.00616 | CACTCCTCCCCTCCA GCCGCC TTCG GGCGGC TTTTTTGCAGGCCGC Ajs_2590 2756075 - 2755395 - | hypothetical protein Ajs_2591 2757082 - 2756072 - | hypothetical protein Ajs_2592 2757907 - 2757098 - | ABC-type transport system ipermease component TERM 2201 2757987 - 2757949 - R 100 -14.7 -4.36596 | opp_overlap 2757950, overlap 2757950 TCGATAAGTAACAAA TTAGCCGCTAGCGCTTA TGCAG CAAGCGCTAGCAGCTAT TAATACCATAGCAAC TERM 2202 2757950 - 2757986 + r 83 -15.3 -3.16564 | opp_overlap 2757949 2757950 CGATAAGTAACAAAT TAGCCGCTAGCGCTT ATGCAGC AAGCGCTAGCAGCTA TTAATACCATAGCAA TERM 2203 2757986 - 2757950 - R 91 -18.2 -3.21235 | opp_overlap 2757950, overlap 2757949 CGATAAGTAACAAAT TAGCCGCTAGCGCTTA TGCAG CAAGCGCTAGCAGCTA TTAATACCATAGCAA Ajs_2593 2758475 - 2758017 - | MerR family transcriptional regulator Ajs_2594 2758516 - 2760537 + | heavy metal translocating P-type ATPase Ajs_2595 2760534 - 2760953 + | hypothetical protein TERM 2204 2761205 - 2761256 + G 75 -13.7 -3.21747 | gap 2, overlap 2761155 GATCTCCGTGGGCGT GGCCTTCCTCGCCA-G-CGCCGG GCTGCTCA CCGGCGGCATGGCGGGGCTGGCC TTCGTGCTGCACTAC Ajs_2596 2761101 - 2761727 + | hypothetical protein TERM 2205 2762016 - 2762051 + G 77 -16 -3.04144 | opp_overlap 2762042 CCGCACTGCTGCGAT ACCGGCGGGGCGGTCC ACGC GGAACACCCCGCCGGC TGTTCGGCCTGCGGC Ajs_2597 2761803 - 2762204 + | hypothetical protein Ajs_2598 2762308 - 2762655 + | hypothetical protein Ajs_2599 2762652 - 2764085 + | copper tolerance protein Ajs_2600 2764087 - 2765475 + | multicopper oxidase, type 3 Ajs_2601 2765493 - 2765975 + | blue (type1) copper domain-containing protein Ajs_2602 2766010 - 2766504 + | hypothetical protein Ajs_2603 2766501 - 2766911 + | hypothetical protein TERM 2206 2768655 - 2768631 - g 78 -15.7 -3.16564 | CTCCGACCCCATCAA GGCCAGCACGC CCG ACGCGCTGGCC GCCCTGCATGCGGCC Ajs_2604 2766967 - 2769174 + | heavy metal translocating P-type ATPase Ajs_2605 2769230 - 2770243 + | peptidase S58, DmpA Ajs_2606 2770246 - 2771583 + | TRAP transporter solute receptor TAXI family protein Ajs_2607 2773838 - 2771613 - | hypothetical protein Ajs_2608 2775635 - 2773896 - | putative ABC transporter ATP-binding protein TERM 2207 2774765 - 2774780 + g 79 -4.6 -4.74801 | overlap 2774766 TCTTCAAAGCCTTGG CGCGAG CCTC CTCGCC TTTTTGCTCGGCTTC Ajs_2609 2775814 - 2777547 + | DEAD/DEAH box helicase domain-containing protein TERM 2208 2777584 - 2777568 - f 100 -15.1 -4.29304 | opp_overlap 2777568 TCACGACAACAGAAA GCCCGGC ACA GCCGGGC TTTTTTCCATGGCCC TERM 2209 2777568 - 2777584 + F 100 -15.1 -5.08824 | opp_overlap 2777568 TCACGACAACAGAAA GCCCGGC ACA GCCGGGC TTTTTTCCATGGCCC TERM 2210 2779118 - 2779100 - g 79 -2.2 -5.01732 | opp_overlap 2779105, overlap 2779101 AAGCCGGTCAAAAAA CGCCACCG CCC CTGCGGCT ATTGGTTGGCAAGCG Ajs_2610 2777684 - 2779504 + | peptidase M14, carboxypeptidase A TERM 2211 2779828 - 2779852 + T 100 -8.6 -5.60689 | gap 1, opp_overlap 2779828 CACGGCCTCTTAGAA CCCGC-ATGCT TCCT AGCGTTGCGGG TTTTTTGTTGTCTCA Ajs_2611 2780519 - 2779968 - | integrase catalytic subunit Ajs_2613 2782569 - 2781490 - | integrase catalytic subunit TERM 2212 2783086 - 2783096 + r 78 -3.2 -5.00616 | GATGAGGCGGTCTTT TTCG GCG CGGA TTTTTTGCAGCAGGG TERM 2213 2784116 - 2784126 + r 93 -8.2 -5.10461 | opp_overlap 2784096, overlap 2784093 CGCTTGCTCCTCAAG CGCC AGA GGCG TTTTTGTTCAATAAC Ajs_2614 2784569 - 2784111 - | hypothetical protein TERM 2214 2784470 - 2784487 + g 79 -3.3 -5.00616 | CGTCTTGCAGGCGGG TGTGGGC GGTG GCCAGCA TTTTTTGCAGCAGGG Ajs_2615 2785149 - 2784562 - | DNA polymerase beta subunit TERM 2215 2784849 - 2784814 - G 72 -5.2 -4.35044 | gap 1, overlap 2784816 GGAGCCAAACACAAA GGCCAGC-GCCACCTGG TCG CCCAGCGGCTGCAGGGC CTGGCGCAGCACATC TERM 2216 2785276 - 2785312 + r 100 -13.8 -4.56775 | overlap 2785278 CTGCTCTTTTTTTGA TAGCTACTAGCGCTTG TCCTT CAAGCGCTAGCGGCTG TTTTTGCCAAAGACT TERM 2217 2785278 - 2785310 + r 89 -14.2 -3.90048 | overlap 2785276 GCTCTTTTTTTGATA GCTACTAGCGCTTG TCCTT CAAGCGCTAGCGGC TGTTTTTGCCAAAGA Ajs_2616 2786774 - 2785296 - | N-6 DNA methylase TERM 2218 2785823 - 2785803 - G 89 -3.1 -5.27335 | opp_overlap 2785818, overlap 2785804 TTCGCCAAACAAAAA GCCATCGGG CAG CACCACGGC GGCGCGGCCGCCGGG TERM 2219 2785818 - 2785838 + g 78 -13.9 -3.54741 | opp_overlap 2785803 2785804 GCCATCGGGCAGCAC CACGGCGGC GCG GCCGCCGGG TTTGAGCAGGTGCTG TERM 2220 2786061 - 2786091 + g 82 -6 -4.82901 | overlap 2786064 2786073 GCCGTGCAGCAGCAG GTTGGTGACGCACA GCA TGTGCGGCAGCTGC TTTTTCTCCACGCCG TERM 2221 2786834 - 2786798 - R 83 -9.5 -4.30448 | opp_overlap 2786798 2786799 2786801, overlap 2786800 2786801 2786822 AAATTTAAGTCAAAA CAGGCTCTAGCGCTTAT GGG ATAAGCGCTAGTAGCTA TCATTTTATGAGCTA TERM 2222 2786833 - 2786800 - R 78 -11.9 -3.74381 | gap 1, opp_overlap 2786799 2786798 2786801, overlap 2786798 2786801 2786822 ATTTAAGTCAAAACA GGCT-CTAGCGCTTAT GGG ATAAGCGCTAGTAGCT ATCATTTTATGAGCT TERM 2223 2786801 - 2786832 + r 83 -15.4 -3.14587 | gap 1, opp_overlap 2786801 2786800 2786798 2786822, overlap 2786799 2786798 TTTAAGTCAAAACAG GCT-CTAGCGCTTAT GGG ATAAGCGCTAGTAGC TATCATTTTATGAGC TERM 2224 2786832 - 2786801 - R 79 -15.4 -2.83906 | gap 1, opp_overlap 2786799 2786798 2786801, overlap 2786800 2786798 2786822 TTTAAGTCAAAACAG GCT-CTAGCGCTTAT GGG ATAAGCGCTAGTAGC TATCATTTTATGAGC Ajs_2617 2787404 - 2786847 - | hypothetical protein Ajs_2618 2789918 - 2787465 - | EcoEI R domain-containing protein TERM 2225 2787990 - 2788022 + g 86 -6.1 -5.0133 | overlap 2787988 2787992 CACGCGCTCGCGGGC CACGGCCACGGTGAC GTT GTTGCCGAGGACGTA TTTTTTGGGGCCATC TERM 2226 2787992 - 2788020 + g 72 -8.7 -4.13561 | overlap 2787988 2787990 CGCGCTCGCGGGCCA CGGCCACGGTGAC GTT GTTGCCGAGGACG TATTTTTTGGGGCCA TERM 2227 2789087 - 2789101 + g 93 -10 -4.63218 | TCTCGTAGCTCTTGT CCACCA GCT TGGTGG TTTTGTTGACAGCCA TERM 2228 2790430 - 2790386 - g 100 -11.6 -4.43012 | gap 2 ATTCGAACACGAAAA CGCTGCCGA-ACA-CCATGC TGCACTG GCACGGATGTACCGGCAGCG CATTGCACGGCTGGA Ajs_2619 2790069 - 2790593 + | hypothetical protein TERM 2229 2791114 - 2791149 + T 100 -29.2 -3.94188 | opp_overlap 2791118, overlap 2791118 CAACCTTGTTGAATG CAAAGGCCCCCGCAGC TTGC GCTGCGGGGGCCTTTG TTATTTGGGGTGGCT TERM 2230 2791145 - 2791118 - T 100 -24.2 -3.75153 | opp_overlap 2791114 2791118 CTTGTTGAATGCAAA GGCCCCCGCAGC TTGC GCTGCGGGGGCC TTTGTTATTTGGGGT TERM 2231 2791118 - 2791145 + T 100 -24.2 -4.57581 | opp_overlap 2791118, overlap 2791114 CTTGTTGAATGCAAA GGCCCCCGCAGC TTGC GCTGCGGGGGCC TTTGTTATTTGGGGT Ajs_2620 2793202 - 2791280 - | PpiC-type peptidyl-prolyl cis-trans isomerase TERM 2232 2792245 - 2792214 - G 95 -6.4 -5.40072 | opp_overlap 2792244 2792244 CCCCGGCCAAAAAAA CCGAGGTCACCGCC GGAC GGTGCTGAGCCCGG GTCCTGCGACTCCTT TERM 2233 2792244 - 2792258 + g 70 -2.1 -4.61231 | gap 1, opp_overlap 2792214, overlap 2792244 GACGGTGCTGAGCCC GG-GTC CTGC GACTCC TTTTTGGCAATCTCC TERM 2234 2793233 - 2793250 + r 73 -11.3 -3.6608 | opp_overlap 2793233 AGCTGCAAAAGAAAA GGCGAAC TTGC GTTCGCC TTTGAATGGGGTGGT TERM 2235 2793250 - 2793233 - R 100 -11.3 -5.08255 | opp_overlap 2793233 AGCTGCAAAAGAAAA GGCGAAC TTGC GTTCGCC TTTGAATGGGGTGGT Ajs_2621 2793624 - 2793352 - | histone family protein DNA-binding protein Ajs_2622 2794615 - 2794031 - | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase TERM 2236 2794485 - 2794471 - G 76 -6.4 -4.56597 | overlap 2794478 2794480 2794483 CGGTGGCCGCAAAAA CGATGA ACA TCACCG TGGCGATGAGGTTGC TERM 2237 2794620 - 2794595 - G 81 -5.3 -4.74706 | opp_overlap 2794608, overlap 2794598 GGGAATAGTGAAAAA CATGGGTGCCA ATTG TGGCACGCGCG GCAATGCCCCGGGCC Ajs_2623 2796619 - 2794646 - | excinuclease ABC, C subunit TERM 2238 2795283 - 2795263 - G 81 -5.3 -4.72272 | overlap 2795266 TGTGGTGATGAAAAA CCACGCAGG AAG CCTGGGTCG CCTCCCCTGCAGTGT Ajs_2624 2797421 - 2796720 - | hypothetical protein Ajs_2625 2797589 - 2798791 + | phage integrase family protein Ajs_2626 2798931 - 2799314 + | hypothetical protein Ajs_2627 2799298 - 2799600 + | transcriptional regulator Ajs_2628 2799689 - 2800156 + | hypothetical protein Ajs_2629 2800156 - 2800782 + | hypothetical protein TERM 2239 2800804 - 2800794 - g 75 -3.2 -4.7497 | overlap 2800795 GTGACCGATGAAAAA GGAA GGC TCCC TCTTGCTCTCGGATT Ajs_2630 2800786 - 2801922 + | hypothetical protein Ajs_2631 2801919 - 2802581 + | hypothetical protein Ajs_2632 2803083 - 2802598 - | hypothetical protein Ajs_2633 2803140 - 2803388 + | hypothetical protein Ajs_2635 2804858 - 2803716 - | hypothetical protein TERM 2240 2805159 - 2805173 + H 71 -12.8 -3.09516 | GCCGTCAAGGGCGGC GCGCGC CCT GCGCGC TTGCGTCCTCGCGGC Ajs_2636 2805271 - 2805777 + | DNA repair protein RadC TERM 2241 2805783 - 2805796 + T 78 -5.2 -4.72986 | overlap 2805777 2805783 GCTGATCTAGCCCAA GGGG CTTCGT CCCC TTTTTGCTGCGCCTG Ajs_2637 2808148 - 2805845 - | hypothetical protein TERM 2242 2806869 - 2806896 + g 70 -2.6 -4.64766 | TGCACCTCAGCCGCC GCAAAGTGGAGC TCCA GTGCTACCTTGC TTTTTGAGGTCTCGG TERM 2243 2807658 - 2807673 + g 73 -4 -4.63486 | CTCGTATCAATCGCC TGAAGT CCTA GCTTCA TTTTCTTGGCAGCAT Ajs_2638 2808416 - 2808132 - | hypothetical protein TERM 2244 2808652 - 2808675 + H 100 -5.2 -6.02919 | CGAATCTAGGAATCC GGTGTGCGGT GTGA ACAGCAAACC TTTTTTTCTTTGTCA TERM 2245 2808981 - 2808952 - g 72 -13.7 -2.95789 | gap 1, overlap 2808947 ACTACACCAAGCACA TGATCCGGCT-GCG CCA CGCCAGCCAGATCA ACGGCCGCGAGGCCA Ajs_2639 2808702 - 2809526 + | hypothetical protein TERM 2246 2809535 - 2809564 + F 93 -17.1 -3.52896 | AGCCTGAATCCCCAC GCGGCAGGGGCAG GCAG CAGCCCTTGCCGC TTCTCTCGCTGCTGC Ajs_2640 2809605 - 2811677 + | ParB family protein TERM 2247 2811712 - 2811654 - f 80 -14.5 -3.15579 | gap 2, opp_overlap 2811694, overlap 2811644 2811643 2811694 GCAAGGGCGGATGAA CCCGCCGAGGCGCTGGCCGCTTGACCCGC GCC GAAGG-CAAGCGCCCCG-GCCTCGACCGG GGCGCTTCGCTGGAA TERM 2248 2811694 - 2811717 + F 84 -16.7 -3.05384 | opp_overlap 2811654 2811694 CCGCGCCGAAGGCAA GCGCCCCGG CCTCGA CCGGGGCGC TTCGCTGGAAGGAGA TERM 2249 2811717 - 2811694 - f 89 -17.4 -3.17075 | opp_overlap 2811694, overlap 2811654 CCGCGCCGAAGGCAA GCGCCCCGGC CTCG ACCGGGGCGC TTCGCTGGAAGGAGA TERM 2250 2811835 - 2811799 - f 71 -13.5 -2.52464 | GCCCCCGGCAAGGCA CGCGCCCGCCGCTGGCA CGG CGCAGGCGACGTGCGCG GCTAACGCCCGCCCT TERM 2251 2812031 - 2812004 - f 100 -16.2 -4.65895 | opp_overlap 2812005, overlap 2812005 CGGTGGACGCAAAAA TCCGAGCGCGGC AGTA GCCGCGCCCGGT GTTCCAAGCCAACAG TERM 2252 2812005 - 2812030 + F 88 -17.5 -3.01712 | opp_overlap 2812005 2812004 GGTGGACGCAAAAAT CCGAGCGCGGC AGTA GCCGCGCCCGG TGTTCCAAGCCAACA TERM 2253 2812030 - 2812005 - f 95 -19.7 -3.39216 | opp_overlap 2812005, overlap 2812004 GGTGGACGCAAAAAT CCGAGCGCGGC AGTA GCCGCGCCCGG TGTTCCAAGCCAACA TERM 2254 2812096 - 2812052 - f 74 -10 -3.77489 | gap 1, overlap 2812058 AAGCCAACAGCCAAA TCAGAACTCCGCCGCCTTCGC AGCA GCTCAGACGGCGGAGTTA-GA AGCGCCGCAGTCCAG TERM 2255 2812091 - 2812058 - f 85 -14.5 -3.62011 | overlap 2812052 ACAGCCAAATCAGAA CTCCGCCGCCTTCGC AGCA GCTCAGACGGCGGAG TTAGAAGCGCCGCAG TERM 2256 2812474 - 2812520 + F 80 -14.2 -3.12351 | overlap 2812470 2812515 TTTTGTTTTTGGCGT GTCGGCGCAATGCGCCGCCGGA CTT TCGGGCTGCGCCCCGTGCCGAC TTCGCTGTCACGGCC TERM 2257 2812676 - 2812650 - f 73 -11.4 -3.54424 | CTCGATGCGGCCAAA CCGGCTGCGCCG GAT CGGCCCGGCCAG CGCCCCGCCGCGATG Ajs_2644 2813197 - 2813550 + | hypothetical protein TERM 2258 2813551 - 2813592 + T 88 -17.2 -3.01924 | opp_overlap 2813535, overlap 2813554 2813559 2813570 2813571 CCCCAGGCGGCGTGA CCGCCGCAGCGCCCCGCC CACCGC GGCGGGGCGCTGTGCTGC TGTTCGCAGCACATC TERM 2259 2813554 - 2813589 + T 90 -19.7 -2.73875 | opp_overlap 2813535, overlap 2813551 2813559 2813570 2813571 CAGGCGGCGTGACCG CCGCAGCGCCCCGCC CACCGC GGCGGGGCGCTGTGC TGCTGTTCGCAGCAC TERM 2260 2813559 - 2813584 + T 91 -19 -2.86432 | opp_overlap 2813535, overlap 2813554 2813551 2813570 2813571 GGCGTGACCGCCGCA GCGCCCCGCC CACCGC GGCGGGGCGC TGTGCTGCTGTTCGC TERM 2261 2813570 - 2813626 + T 73 -10.8 -3.55563 | opp_overlap 2813609, overlap 2813559 2813554 2813551 2813571 2813617 CGCAGCGCCCCGCCC ACCGCG-GCGGGGCGCTGTGCTGCTGTT CGC AGCA-CATCACCGCGTCACGCGCGCGGC TTTGCCGCATCGCGT TERM 2262 2813571 - 2813625 + T 75 -14.3 -2.73124 | opp_overlap 2813609, overlap 2813559 2813554 2813551 2813570 2813617 GCAGCGCCCCGCCCA CCGCG-GCGGGGCGCTGTGCTGCTGTT CGC AGCA-CATCACCGCGTCACGCGCGCGG CTTTGCCGCATCGCG Ajs_2645 2813901 - 2813614 - | XRE family transcriptional regulator Ajs_2646 2815564 - 2814071 - | hypothetical protein Ajs_2647 2816457 - 2815561 - | TniB family protein Ajs_2648 2818124 - 2816454 - | integrase catalytic subunit Ajs_2649 2818738 - 2818121 - | hypothetical protein TERM 2263 2818925 - 2818883 - H 73 -7.1 -4.27316 | gap 1, overlap 2818884 2818888 2818898 GCCTTTAACGGAAAA CGACATTTACGGAAATCCGC ATCG GCGGATTCCAGCAAA-GCCA CGCAGGCGCATCCGT Ajs_2650 2819034 - 2819384 + | putative lipoprotein TERM 2264 2819884 - 2819910 + G 81 -16.6 -3.08464 | opp_overlap 2819878 GCTGGAAGACCCGGC ACTGGATGCGCG TGA CGCGCATCCAGC TTGGCTGCCTGGTCA Ajs_2651 2819693 - 2820454 + | hypothetical protein Ajs_2652 2820538 - 2820819 + | hypothetical protein Ajs_2653 2820846 - 2821703 + | putative replication initiator and transcription repressor protein Ajs_2655 2821957 - 2822595 + | cobyrinic acid a,c-diamide synthase Ajs_2656 2822592 - 2822879 + | hypothetical protein Ajs_2657 2822876 - 2823433 + | hypothetical protein Ajs_2658 2823430 - 2824029 + | putative conjugal transfer TRAF transmembrane protein TERM 2265 2824113 - 2824149 + T 76 -15.2 -2.52464 | gap 1, overlap 2824110 TCGCCGTGTCGTCGC GCGTGCAGTGCGGGTGC ATTC GCACC-GCACTTCGCGC TGCCTTCGGCGCAGC TERM 2266 2824336 - 2824314 - T 81 -6.8 -4.7033 | overlap 2824316 GAAGGCAAGACAAAA GGGGGCGGCA CTT CGTCGCCCGC AAAGCCAGCCTGCAC Ajs_2660 2825799 - 2824828 - | integrase catalytic subunit TERM 2267 2827219 - 2827199 - R 70 -12.5 -2.93073 | opp_overlap 2827197, overlap 2827173 2827196 CTGGCCGAACAAGGA CTGGCCGAG AAG CGCGGCCAG CGTGTGATTCTGGTG Ajs_2662 2827952 - 2827602 - | hypothetical protein TERM 2268 2829026 - 2829069 + G 70 -13.2 -3.01712 | gap 1 GGACATCTTCATCGC CTGCGTCGATGGGCTCAAGGG CTT CCCT-GACGCCATCGAGGCAG TCTTCCCCAAGGCGG Ajs_2663 2828319 - 2829545 + | transposase, mutator type TERM 2269 2829839 - 2829854 + T 74 -9 -3.93288 | opp_overlap 2829838 2829834, overlap 2829834 GGATGCAACACCAAC TCACCG TTTC CGGTGA TTTGGTTCCGTAGAC TERM 2270 2829943 - 2829957 + T 93 -3.6 -5.63517 | overlap 2829941 ATTTATAAGCTTTTT CTTATT AAG AGTAAG TTTTTTATTTCAAAA Ajs_2667 2830814 - 2830473 - | hypothetical protein Ajs_2668 2831385 - 2830894 - | blue (type1) copper domain-containing protein Ajs_2669 2832750 - 2831419 - | multicopper oxidase, type 3 Ajs_2670 2834278 - 2832848 - | putative copper resistance-related lipoprotein Ajs_2671 2834616 - 2834275 - | hypothetical protein TERM 2271 2834694 - 2834718 + H 100 -21.5 -3.01924 | TTGTCATGATCGAGC GGGGTGAGGGG TAA CCCCTCACCCC TCTTACACCACCGTA TERM 2272 2834744 - 2834777 + H 73 -13.1 -3.19463 | opp_overlap 2834729 CCGTACGTGCGGTTC CGCCTACGGCGGTTC ACGT GGACCGCTGGAGGTG TTGGTGGATGGTCAA Ajs_2673 2835350 - 2835658 + | flagellar hook-basal body complex subunit FliE TERM 2273 2836129 - 2836157 + G 77 -13.1 -3.61398 | overlap 2836130 2836136 2836153 CGTCGCTCAATGCCA TCGGCCACCGTGT CGC ACACGGTGGCCCC TTCTTGCGCGAGGCG TERM 2274 2836130 - 2836156 + G 77 -16.6 -2.76696 | overlap 2836129 2836136 2836153 GTCGCTCAATGCCAT CGGCCACCGTGT CGC ACACGGTGGCCC CTTCTTGCGCGAGGC TERM 2275 2836299 - 2836315 + G 70 -6.5 -4.25283 | overlap 2836289 GGCGTGCGCCACGTG GCGGTCT TCG ACACCGC TTTTCATGCCGGCAT Ajs_2674 2835954 - 2837099 + | acetate kinase Ajs_2675 2837313 - 2837765 + | MerR family transcriptional regulator Ajs_2676 2837816 - 2839273 + | cyclopropane-fatty-acyl-phospholipid synthase TERM 2276 2839493 - 2839447 - g 71 -12.2 -3.29511 | gap 1, opp_overlap 2839486 2839488, overlap 2839450 2839472 GTGAGCCGCCGACAA GCACGCCGAGACGCC-CGCCG ACACAG CGCCGTGGCGCCTCTGCGCAC GCAGGCGCCGCGCAC Ajs_2677 2839432 - 2839911 + | hypothetical protein TERM 2277 2841405 - 2841368 - g 72 -13.4 -3.19293 | gap 1 AAGGCCAATACTCAA CTGCGCCCGCGCGTCGG CAATC CCGACGAGCTG-CGCAG CAACCGCATGGGCCA Ajs_2678 2840018 - 2842438 + | D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase TERM 2278 2843529 - 2843552 + G 77 -15.4 -3.07344 | AGGTCGCCGCTGCCT TCGAGGTCGA GCAC TCGACCTCGA TCTATTCCGGCATCG Ajs_2679 2842544 - 2843806 + | hypothetical protein Ajs_2680 2844915 - 2843872 - | glyceraldehyde-3-phosphate dehydrogenase Ajs_2681 2846562 - 2844943 - | 2-octaprenylphenol hydroxylase Ajs_2682 2847581 - 2846562 - | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding Ajs_2683 2848240 - 2847578 - | methyltransferase type 11 TERM 2279 2848365 - 2848349 - R 100 -2.1 -5.93809 | opp_overlap 2848361, overlap 2848351 2848352 2848353 GTCGCATAAAAAAAA TAGGCGG CGA CCGCGGA CACGAAGGCCGCATT TERM 2280 2848363 - 2848351 - R 74 -4.7 -4.62054 | opp_overlap 2848361, overlap 2848349 2848352 2848353 CGCATAAAAAAAATA GGCGG CGA CCGCG GACACGAAGGCCGCA Ajs_2685 2849658 - 2848570 - | transposase, IS4 family protein Ajs_2686 2850206 - 2849730 - | hypothetical protein Ajs_2687 2850888 - 2850244 - | hypothetical protein Ajs_2688 2852070 - 2850895 - | peptidase S1 and S6, chymotrypsin/Hap Ajs_2689 2852966 - 2852067 - | phosphoribosylpyrophosphate synthetase TERM 2281 2852941 - 2852904 - G 74 -14.9 -3.05384 | gap 1 CCGCTCCGCACGCAA CGCGCGGACGAGGCCTTC GGC GAAGGCCTCGT-CGCCTG ACAGGTGAAAAATGA Ajs_2690 2854504 - 2852963 - | thymidine phosphorylase Ajs_2691 2855859 - 2854501 - | beta-lactamase domain-containing protein TERM 2282 2854599 - 2854628 + g 73 -11.3 -3.64703 | opp_overlap 2854615, overlap 2854595 CGGCCGCTTCGGGCT CGCCGTGCGTCAC GAAC GTGCGGCGCGGCG TTTGCGTGAAGCCGC TERM 2283 2855654 - 2855630 - G 72 -8.5 -4.07687 | opp_overlap 2855646, overlap 2855631 ACCCGCCCGCGAAAA CCCTGCCGC GCCAGCA GCGGCAGGT AGCCGCTGTGATCGA Ajs_2692 2856382 - 2855885 - | hypothetical protein Ajs_2693 2857289 - 2856384 - | hypothetical protein Ajs_2694 2857902 - 2857291 - | LemA family protein Ajs_2695 2859212 - 2857899 - | major facilitator superfamily transporter Ajs_2696 2861610 - 2859232 - | copper-translocating P-type ATPase TERM 2284 2861106 - 2861089 - G 75 -3.3 -4.79053 | AAAGATGAAAAGAAA GAGCTTG TTGT CCAGCCC GAACGGCGTCTGGAA Ajs_2697 2862576 - 2861713 - | hypothetical protein Ajs_2698 2863371 - 2862937 - | hypothetical protein TERM 2285 2863860 - 2863906 + G 77 -13 -3.61715 | gap 1, opp_overlap 2863871 TGACATGCTCGCGCG GTGCGAGGA-GACGGGGCAGG CGTTTC CCTGCCCCATCATCGCCGCAC TTGTTGGCACGCCTG Ajs_2699 2863441 - 2863956 + | MerR family transcriptional regulator Ajs_2700 2864249 - 2864599 + | hypothetical protein Ajs_2701 2865202 - 2864807 - | hypothetical protein Ajs_2702 2866991 - 2865240 - | hypothetical protein TERM 2286 2866380 - 2866344 - G 78 -15.2 -3.28119 | gap 1 AGCGATCGAGACCAA CGGCCGTGAGTGACCGG CCAG CCG-CCACTCACGGCGG AACATGTCCACCAGC Ajs_2703 2870167 - 2866988 - | CzcA family heavy metal efflux protein Ajs_2704 2871799 - 2870183 - | RND family efflux transporter MFP subunit TERM 2287 2871461 - 2871478 + g 73 -9.1 -4.01564 | ACGCAGACTGACCGC CTCGGTG CGAA CGCCGAG TTTCTGAATCTTTTC Ajs_2705 2873070 - 2871796 - | outer membrane efflux protein Ajs_2706 2873315 - 2873067 - | hypothetical protein Ajs_2707 2874652 - 2873372 - | membrane protein-like protein TERM 2288 2875058 - 2875042 - R 83 -7.9 -4.62471 | overlap 2875044 GGGAACCTCTAAAAA CCCCGCT TTT AGCGGCG TGCAGGCTGAGGCAG TERM 2289 2875066 - 2875096 + r 86 -6.3 -5.0133 | overlap 2875069 TAGCGGCGTGCAGGC TGAGGCAG-ACCGAA AGT TTTGGTTCTGCC-CA TTTTTTAAGCAAATC Ajs_2708 2875425 - 2875120 - | hypothetical protein TERM 2290 2875508 - 2875489 - R 70 -12.2 -3.15999 | TTTTTAGAGATGTAA TGGATGCC GGGA GGCATCCA TACAAGGTTCCCAGA Ajs_2709 2877468 - 2875549 - | hypothetical protein TERM 2291 2876954 - 2876925 - G 72 -5 -4.52345 | gap 1, overlap 2876926 AGATGACGAAATAAA CCGG-ATGGCCCT CACGC ATGGCCATTCCGA CTTCAGAGTCGCGCT TERM 2292 2877378 - 2877388 + g 70 -2.4 -4.65446 | overlap 2877377 GCAGATCCTCCGCCG GGCG TTG CACC TTTTGTATCTCTGCT Ajs_2710 2879996 - 2877489 - | heavy metal translocating P-type ATPase Ajs_2711 2880266 - 2880006 - | hypothetical protein Ajs_2713 2881363 - 2880695 - | hypothetical protein Ajs_2714 2881635 - 2881360 - | hypothetical protein Ajs_2715 2882134 - 2881646 - | hypothetical protein Ajs_2717 2883017 - 2882730 - | hypothetical protein TERM 2293 2882984 - 2883004 + g 90 -2.5 -5.4477 | overlap 2882986 TAACAGAAATGGCGC TCATGATGG CAA CCATCAACA TTTTTTTCAACATTT TERM 2294 2883100 - 2883123 + r 75 -12.4 -3.57457 | opp_overlap 2883103, overlap 2883103 TAAGGAAGGTCTGCA CAACTGCCGC TGAG GCGGCTGTTG TTGGTTGATTTTTCA TERM 2295 2883103 - 2883120 + r 71 -8.3 -3.88541 | opp_overlap 2883103, overlap 2883100 GGAAGGTCTGCACAA CTGCCGC TGAG GCGGCTG TTGTTGGTTGATTTT Ajs_2718 2884237 - 2883245 - | transposase, IS4 family protein Ajs_2719 2884430 - 2884744 + | hypothetical protein Ajs_2720 2885260 - 2884919 - | hypothetical protein Ajs_2721 2885894 - 2885394 - | blue (type1) copper domain-containing protein Ajs_2722 2887340 - 2885928 - | multicopper oxidase, type 3 Ajs_2723 2888787 - 2887357 - | putative copper resistance-related lipoprotein Ajs_2724 2889080 - 2888784 - | hypothetical protein TERM 2296 2888997 - 2889007 + g 72 -8.2 -4.09243 | opp_overlap 2888982 GTACTGCAGCTTCGT CGGC AGT GCCG TTTTCGGCGCCTCTG Ajs_2725 2889275 - 2889958 + | two component heavy metal response transcriptional regulator Ajs_2726 2889959 - 2891362 + | heavy metal sensor signal transduction histidine kinase Ajs_2727 2891434 - 2891862 + | hypothetical protein TERM 2297 2891920 - 2891941 + F 82 -10.8 -4.05788 | overlap 2891921 2891936 TGCACGACACCCTCA TCGCCGCG CTCAGA CGCGGCGG TTTGCTTTCCGAACC Ajs_2728 2892313 - 2892666 + | hypothetical protein Ajs_2730 2893073 - 2893597 + | hypothetical protein Ajs_2731 2893620 - 2894138 + | transposase family protein Ajs_2733 2894631 - 2894987 + | hypothetical protein TERM 2298 2895180 - 2895151 - T 93 -13.7 -4.11394 | opp_overlap 2895156, overlap 2895156 AGCGGAGGTCGAAAA CAAAAGAGCCACC CGAA GGTGGCTCTTTTT TCCTCTAAATCAACA TERM 2299 2895156 - 2895175 + T 100 -13.6 -5.22312 | opp_overlap 2895151 2895156 AGGTCGAAAACAAAA GAGCCACC CGAA GGTGGCTC TTTTTTCCTCTAAAT TERM 2300 2895175 - 2895156 - T 100 -13.6 -5.08255 | opp_overlap 2895156, overlap 2895151 AGGTCGAAAACAAAA GAGCCACC CGAA GGTGGCTC TTTTTTCCTCTAAAT Ajs_2734 2896994 - 2895585 - | glutamyl-tRNA synthetase Ajs_2735 2898205 - 2896991 - | O-succinylhomoserine sulfhydrylase TERM 2301 2898252 - 2898268 + r 78 -2.9 -5.0538 | overlap 2898254 TGATAGCGCTTGCTG TACCTGG ACT TCAGGCA TTTTTTACCCTGAAA TERM 2302 2898308 - 2898298 - R 76 -8.2 -4.11585 | opp_overlap 2898295 2898298 2898302 ACCCAGTACAAACAA GCGC AAG GCGC TCATCTTTTTGATGA Ajs_2736 2899844 - 2898336 - | amidophosphoribosyltransferase Ajs_2737 2900410 - 2899922 - | colicin V production protein Ajs_2738 2901293 - 2900451 - | sporulation domain-containing protein TERM 2303 2901206 - 2901233 + g 74 -7.6 -4.29106 | CCTCGATGCTCTCGG CCTGCGGAGTGC GTGA GCGCTTGGCGGG TTTGTTGGTGTCGCC Ajs_2739 2902633 - 2901308 - | FolC bifunctional protein TERM 2304 2902889 - 2902936 + G 80 -16.9 -2.62184 | gap 1 CCTGGCGCAAGCTGG ACGCGGCCGTGCAGGCCGGCGT GACGG ACGCCCGCA-GCGCGGCCGCGC TGATGTGCGAGCAGC Ajs_2740 2902681 - 2903067 + | arsenate reductase and related Ajs_2741 2903180 - 2903860 + | 17 kDa surface antigen TERM 2305 2903909 - 2903924 + F 83 -6.8 -4.90266 | opp_overlap 2903909 ACGGCGCATGCCAAA GGGCTC TTCG GAGTCC TTTTTCGTTGCTGCG TERM 2306 2904065 - 2904047 - g 79 -2.3 -5.1101 | opp_overlap 2904036, overlap 2904048 2904049 TGACCACCGAAAAAA TCGACGG TGTTT CCGTCAC CACCCAGGCCAATGT Ajs_2742 2904031 - 2904348 + | hypothetical protein Ajs_2743 2904415 - 2905761 + | argininosuccinate synthase TERM 2307 2905856 - 2905814 - T 90 -8.5 -4.88736 | gap 1, opp_overlap 2905823, overlap 2905819 2905823 TAGCAGCTATAAAAA CAGAA-GCAACCACCCGGCA GGCC TGCCGGGTGGTTTTTTTATG CGCCGTTCAAAGAGC TERM 2308 2905850 - 2905819 - T 89 -13 -4.13816 | opp_overlap 2905823, overlap 2905814 2905823 GCTATAAAAACAGAA GCAACCACCCGGCA GGCC TGCCGGGTGGTTTT TTTATGCGCCGTTCA TERM 2309 2905846 - 2905823 - T 100 -18.2 -3.64119 | opp_overlap 2905823, overlap 2905819 2905814 TAAAAACAGAAGCAA CCACCCGGCA GGCC TGCCGGGTGG TTTTTTTATGCGCCG TERM 2310 2905823 - 2905846 + T 100 -18.2 -5.60993 | opp_overlap 2905819 2905814 2905823 TAAAAACAGAAGCAA CCACCCGGCA GGCC TGCCGGGTGG TTTTTTTATGCGCCG Ajs_2744 2906571 - 2905852 - | exsB protein Ajs_2745 2907236 - 2906568 - | hypothetical protein TERM 2311 2907345 - 2907318 - H 70 -9.8 -3.66654 | gap 1, opp_overlap 2907318 2907317, overlap 2907323 GACGCGAAGCGCAAA CCACAGCGGTGGC AGG GCCACC-CCGAGG ATTTGCATCGACGCA TERM 2312 2907497 - 2907507 + H 95 -3.2 -5.75342 | overlap 2907484 2907485 ACCCGCGCACAGGGC TGCG CCG CGTA TTTTTTTTCAAGGCA TERM 2313 2907902 - 2907951 + G 71 -14.9 -2.52516 | gap 1, overlap 2907901 GCCAGCGACCTGTCC GTGGCGCTGCTCGTGGTGCTGGAG CGC CTCACGCCCGACGAGC-GCGCCGC CTTCCTGCTGCACGA Ajs_2746 2907560 - 2908447 + | ECF subfamily RNA polymerase sigma-24 factor Ajs_2747 2908523 - 2908978 + | alkylhydroperoxidase Ajs_2748 2909268 - 2910704 + | anion transporter TERM 2314 2910806 - 2910772 - T 82 -14.3 -3.35679 | overlap 2910791 GCCCTTTACTGATAA GCGGTAGCAGCTATC AAAAG GTTAGCAGCTACCGC CTGCTAGACCACCAC Ajs_2749 2911886 - 2910810 - | UDP-N-acetylmuramate dehydrogenase TERM 2315 2911898 - 2911923 + H 74 -13.9 -2.924 | overlap 2911903 ACATCGACCGGATTG TCGCACCCGCC CCCA GGCGGGCGCGG GTTTGTACCGAGTTA TERM 2316 2911903 - 2911924 + H 83 -12.9 -3.87869 | overlap 2911898 GACCGGATTGTCGCA CCCGCCCCC AGGC GGGCGCGGG TTTGTACCGAGTTAG Ajs_2750 2911954 - 2912439 + | nucleotide-binding protein Ajs_2751 2912456 - 2913100 + | hypothetical protein Ajs_2752 2913123 - 2914124 + | putative metal dependent phosphohydrolase TERM 2317 2914173 - 2914151 - T 74 -9.8 -3.78775 | opp_overlap 2914166, overlap 2914155 TGCCGCATCAGGAAA CACACGGCAC TGC GTGCCGCCTG CCGGGTACGGCCAGG TERM 2318 2914173 - 2914200 + T 100 -14.2 -4.27796 | gap 1, overlap 2914166 CACTGCGTGCCGCCT GCCGGGTACG-GC CAG GCGCGTATCCGGC TTTTAGGCTTTCTTC Ajs_2753 2914823 - 2914203 - | acyl-phosphate glycerol-3-phosphate acyltransferase Ajs_2754 2915384 - 2914884 - | ybaK/ebsC protein TERM 2319 2914998 - 2914962 - G 81 -11.5 -3.97834 | gap 1, opp_overlap 2914966 CAACTGCACCAGAAA GCCGCGGCGC-CCGCC GTTGAT GGCGATGCGCGGCAGC TGCAGGATGCTCTCC Ajs_2755 2916511 - 2915450 - | aldo/keto reductase Ajs_2756 2916640 - 2917575 + | alpha/beta hydrolase fold TERM 2320 2917698 - 2917749 + F 71 -5.7 -4.30987 | gap 2, opp_overlap 2917729 GCGCAGCGCGGTGTC GTGGC-AGGCGCTGCCGCCCG-TGG CCGA CAATCGGGCAACCGCGCTTTGCCGC TTTGTTGTCAACCCT Ajs_2757 2917784 - 2918791 + | diaminopimelate dehydrogenase Ajs_2758 2918979 - 2920083 + | peptide chain release factor 2 TERM 2321 2920978 - 2920941 - g 70 -6.3 -4.21812 | gap 1, opp_overlap 2920953, overlap 2920942 CGCCATGGAAAACAA GGGCCTGAACAT-CTTCA ACA CGAAGTACGTTCTGGCCA GCCAGGCCACGGCGA Ajs_2759 2920129 - 2922831 + | alanyl aminopeptidase Ajs_2760 2922843 - 2923862 + | fructose-1,6-bisphosphatase TERM 2322 2923953 - 2923988 + F 78 -15.6 -2.72511 | opp_overlap 2923958, overlap 2923958 TCTCCGGCACCACAA TGAAAGCCCCTGATTC GCAA GAGTCAGGGGCTTTTG CTTTGGCGGAATGCA TERM 2323 2923958 - 2923983 + F 100 -15.5 -4.54727 | opp_overlap 2923958, overlap 2923953 GGCACCACAATGAAA GCCCCTGATTC GCAA GAGTCAGGGGC TTTTGCTTTGGCGGA TERM 2324 2923983 - 2923958 - f 86 -13.3 -4.02108 | opp_overlap 2923958 2923953 GGCACCACAATGAAA GCCCCTGATTC GCAA GAGTCAGGGGC TTTTGCTTTGGCGGA Ajs_2761 2924184 - 2925164 + | DNA ligase TERM 2325 2925239 - 2925210 - T 100 -10.7 -4.9448 | opp_overlap 2925216, overlap 2925211 2925216 AGCTATCAAACAAAA GCAAAAGGGGCGG TCGC CCGCCCCTTTTTA GCCCGCCCCTCCTGC TERM 2326 2925238 - 2925211 - T 85 -14.2 -3.55603 | opp_overlap 2925216, overlap 2925210 2925216 GCTATCAAACAAAAG CAAAAGGGGCGG TCGC CCGCCCCTTTTT AGCCCGCCCCTCCTG TERM 2327 2925233 - 2925216 - T 100 -14.1 -4.81644 | opp_overlap 2925216, overlap 2925211 2925210 CAAACAAAAGCAAAA GGGGCGG TCGC CCGCCCC TTTTTAGCCCGCCCC TERM 2328 2925216 - 2925233 + T 100 -14.1 -4.56597 | opp_overlap 2925211 2925210 2925216 CAAACAAAAGCAAAA GGGGCGG TCGC CCGCCCC TTTTTAGCCCGCCCC Ajs_2762 2927643 - 2925274 - | ornithine decarboxylase TERM 2329 2927853 - 2927886 + G 70 -5.9 -4.21908 | gap 1 GTGGCTCATGGCCGG GGTGGCCGTG-GTGGC CGA GCTGCTCACCGGCACC TTTTACCTGCTGATG Ajs_2763 2927812 - 2928243 + | hypothetical protein Ajs_2764 2928322 - 2929236 + | SPFH domain-containing protein/band 7 family protein TERM 2330 2929261 - 2929298 + F 74 -2 -4.86621 | gap 1, overlap 2929262 TTTGCTCTTTTTTTT ATAGCTACCAGCGCT CACCCCACA AGCGCTGG-AGCCAC TTTTTGCTTAGAACT TERM 2331 2929549 - 2929539 - g 74 -2.4 -4.78237 | overlap 2929541 GACGGCAGAAGAAAA GGCC GAG GGCT GCGTGCTGCCCTGCG Ajs_2765 2929318 - 2929611 + | ferredoxin Ajs_2766 2929870 - 2930991 + | 3,4-dihydroxy-2-butanone 4-phosphate synthase ribH 2930995 - 2931459 + | riboflavin synthase subunit beta Ajs_2768 2931456 - 2931989 + | NusB antitermination factor Ajs_2769 2932083 - 2933267 + | aminotransferase TERM 2332 2933328 - 2933344 + G 71 -12.3 -3.31905 | opp_overlap 2933327 2933325, overlap 2933325 TTACTGGGAAGACAC CGATGCC GGC GGCATCG TGTTCTATGCCAACT Ajs_2770 2933287 - 2933712 + | 4-hydroxybenzoyl-CoA thioesterase TERM 2333 2934005 - 2933990 - g 73 -6 -4.4261 | overlap 2933991 2933992 GCGCGAATACCAAAA GCTGCG GGAA CGCCGC ATCAGCGACCCCGGC Ajs_2771 2933709 - 2934410 + | MotA/TolQ/ExbB proton channel TERM 2334 2934535 - 2934546 + F 71 -5.8 -4.36914 | GGCGTCTGCTGGCAT CGGA CACG TCCG TTTTATCCACAGCGC Ajs_2772 2934590 - 2935015 + | biopolymer transport protein ExbD/TolR Ajs_2773 2935037 - 2936008 + | TonB family protein Ajs_2774 2937462 - 2936131 - | general substrate transporter TERM 2335 2936272 - 2936254 - G 73 -13.8 -3.20382 | CCCCAGAGCCACCAA CGGCGCGA AGG CCGCGCCG ATCAGCCAGGCCAGG TERM 2336 2937705 - 2937755 + H 91 -9.6 -4.57073 | gap 1 TCCGTCCAGTAATTC GCGTTTAC-ACCTAGCGCCGCGC CCGCCC GCGCGACGCAAGGCCGTGCACGC TTTTTGACACGCCTA TERM 2337 2937817 - 2937858 + G 93 -18.1 -3.65812 | gap 1, opp_overlap 2937792 2937793, overlap 2937791 2937809 2937804 CCACCTGGCTCGCCG CGGCTTTGGCCGCAGCCAGC CTG GCTGGTTGCAGC-AAGGCCG TTGTATTGAACCCGG Ajs_2775 2937774 - 2938823 + | ubiquinol oxidase, subunit II TERM 2338 2940636 - 2940621 - g 75 -3.2 -4.8048 | gap 1 GTGGGACATGAAAAA GCAC-GG CTA CCAGCGC CCGCTCACCGGCTTC Ajs_2776 2938951 - 2940891 + | cytochrome-c oxidase Ajs_2777 2940884 - 2941519 + | cytochrome c oxidase, subunit III Ajs_2778 2941520 - 2941948 + | cytochrome C oxidase subunit IV TERM 2339 2942003 - 2942044 + G 71 -9.3 -3.79874 | overlap 2942007 2942009 2942010 GCGCGCACTCCAACC TGACGATGGCGGTGCTCGC TCTG GCGGGCATCGCCCTGTTCG TTGTGTTCTGTGCCC TERM 2340 2942007 - 2942040 + G 70 -10.9 -3.57171 | overlap 2942003 2942009 2942010 GCACTCCAACCTGAC GATGGCGGTGCTCGC TCTG GCGGGCATCGCCCTG TTCGTTGTGTTCTGT TERM 2341 2942009 - 2942038 + G 73 -13.5 -3.34812 | overlap 2942007 2942003 2942010 ACTCCAACCTGACGA TGGCGGTGCTCGC TCTG GCGGGCATCGCCC TGTTCGTTGTGTTCT TERM 2342 2942010 - 2942037 + G 80 -17 -2.59803 | overlap 2942009 2942007 2942003 CTCCAACCTGACGAT GGCGGTGCTCGC TCTG GCGGGCATCGCC CTGTTCGTTGTGTTC TERM 2343 2942486 - 2942538 + G 86 -8.2 -4.72272 | gap 2, overlap 2942489 CGCAGCGCTGGCATT CGCGCGACGTGGCGGCCATCGCCCAG GCG CAGGGCC-TGGACGCCGCGGCCC-CG TTTTTCATCGACGCG TERM 2344 2942603 - 2942641 + G 100 -22.4 -3.17075 | ATGCCGAGACTTCCA CCACCGCCGGTCCCTGGC CCC GCCCGGGACTGACGGTGG TTCGCTTCCACAACA Ajs_2779 2941960 - 2942769 + | Surfeit locus 1 family protein Ajs_2780 2942766 - 2944106 + | integral membrane sensor signal transduction histidine kinase Ajs_2781 2944096 - 2944629 + | two component Fis family transcriptional regulator Ajs_2782 2944741 - 2945169 + | glutathione S-transferase-like protein TERM 2345 2945381 - 2945417 + F 70 -11.6 -3.12803 | opp_overlap 2945380 2945384, overlap 2945380 2945384 GGCGATGCCACGAAG CTAGGGCCTGTTGGCA CGGAA TGTGAACAGGCCCTCG TCTTGGATATACCTG TERM 2346 2946069 - 2946031 - g 73 -6 -4.41494 | gap 1, overlap 2946032 GATGGTCAAGGAAAA GTGGCCCGAGACCGAGA TCCATC TCTCGGTG-CAGGCCAA CACCACCAACTACGC Ajs_2783 2945705 - 2947081 + | peptidase U32 TERM 2347 2947170 - 2947200 + G 85 -14 -4.15044 | opp_overlap 2947178 CGAGCAGCTCCTCTT TTTGCAAAGGCCCC GGC GGGGCCTTTGCCCA TTTCTTGCCCCGCCC TERM 2348 2947192 - 2947178 - g 74 -12.8 -3.53012 | opp_overlap 2947170 TCCTCTTTTTGCAAA GGCCCC GGC GGGGCC TTTGCCCATTTCTTG TERM 2349 2947896 - 2947874 - g 100 -11.9 -4.30576 | overlap 2947876 GGTGGAGGAGCAAAA GAGCGCCGC GGCCG GCGGCGCAC AGGAACTCAAGCAGG TERM 2350 2947894 - 2947876 - g 79 -13.1 -3.7574 | overlap 2947874 TGGAGGAGCAAAAGA GCGCCGC GGCCG GCGGCGC ACAGGAACTCAAGCA TERM 2351 2947985 - 2947949 - g 77 -7.3 -4.51301 | gap 1, overlap 2947950 2947970 CAAGAAAAAACCAAA GGCCGATGCCGCCG CAACGGAGGC CGACGGCACC-GCC GGGCCGGAATCGACG Ajs_2784 2947137 - 2948114 + | hypothetical protein TERM 2352 2948172 - 2948130 - T 78 -15.4 -2.78384 | GCGCCCGTCAGGAGA CTGCCGCGCGCACGCCCTGC ACC GCCACGCGTGCGCGGCGCAG CGCCATCCACTGCAG Ajs_2785 2948553 - 2948122 - | hypothetical protein Ajs_2786 2948659 - 2949474 + | XRE family transcriptional regulator TERM 2353 2949650 - 2949623 - T 100 -16.2 -5.14626 | ATGAGCAAAAGAAAA CCCCCGCCAGGC ATGC GCCCTGCGGGGG TTGACGGGAGGGGCC Ajs_2787 2952285 - 2949694 - | bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase TERM 2354 2951759 - 2951789 + g 74 -2.5 -4.77567 | gap 1, overlap 2951776 TCGTCGGTGTTGGTT TCGCCGGGCACCTT GAAC ACGGTGAC-GGTGA TTTTCTTCTCGACCT TERM 2355 2952384 - 2952332 - R 74 -12.7 -3.2964 | opp_overlap 2952371 2952375, overlap 2952320 AAAGTGGGGCGACAA CCGGC-CGGCCACACTGGCGCACAC GGCAG GCGTGCACT-GCGTGGCCCCGCCGG CAGGCGGCTCTAGGT Ajs_2788 2953020 - 2952400 - | hypothetical protein TERM 2356 2952829 - 2952856 + g 74 -9.8 -3.8062 | CGTGCGGCTGCTGGT GGGCGACGCCTT GGCG ACGGTGTCGCTC TTCTTCTCGGCCTTG Ajs_2789 2954090 - 2953080 - | HpcH/HpaI aldolase Ajs_2790 2954863 - 2954087 - | trans-aconitate 2-methyltransferase TERM 2357 2954150 - 2954126 - G 70 -9.9 -3.66497 | overlap 2954127 GAACAAACGGGGAAA GGCGAACAGCC GAT GGCCGTCCGCG CGCTTGGTATAGGCC TERM 2358 2954603 - 2954580 - G 75 -7.3 -4.32046 | overlap 2954575 2954581 2954582 TTGGCAAAAATCAAA TCGGGCGCC ACGGTG GGCGCCCAG TCGGCAATGTCGGCC Ajs_2791 2955928 - 2954876 - | malate dehydrogenase Ajs_2792 2955998 - 2956852 + | GntR family transcriptional regulator Ajs_2793 2956992 - 2957426 + | succinate dehydrogenase subunit C Ajs_2794 2957470 - 2957835 + | succinate dehydrogenase subunit D Ajs_2795 2957858 - 2959663 + | succinate dehydrogenase subunit A Ajs_2796 2959694 - 2960398 + | succinate dehydrogenase subunit B Ajs_2797 2960404 - 2960676 + | hypothetical protein gltA 2960719 - 2962029 + | type II citrate synthase TERM 2359 2962069 - 2962034 - f 80 -14.7 -3.15758 | gap 1, overlap 2962023 2962058 ACAAGCGCTGATCAA GCAGCGC-CGCCTGCC GCGAA GGCAGGCGTGCCCCGC CCCCCGCCCGCACGC TERM 2360 2962075 - 2962101 + F 100 -13.7 -5.08824 | CGTGCCCCGCCCCCC GCCCGCACGCA CCTGT TGCCTGCGGGC TTTTTTGCGTCCGGG Ajs_2799 2962344 - 2962610 + | hypothetical protein Ajs_2800 2962646 - 2963761 + | alcohol dehydrogenase TERM 2361 2964119 - 2964080 - g 72 -12.9 -3.14344 | gap 2 GACCTTCCCCATCAA GGCCGGCGCCCAGCGCCTG GCGG CAGA-GCTGGGC-CTGGCC CTCATCACCCCCGAC TERM 2362 2964155 - 2964139 - g 71 -15.1 -2.62616 | TCACCCCCGACACCA GCCCGCG CGG CGCGGGC GTGGCGGGCGAGGCC Ajs_2801 2963868 - 2964752 + | carboxylesterase Ajs_2802 2965242 - 2964943 - | antibiotic biosynthesis monooxygenase Ajs_2803 2966506 - 2965298 - | radical SAM domain-containing protein Ajs_2804 2967521 - 2966520 - | hypothetical protein TERM 2363 2967201 - 2967218 + g 75 -9.1 -4.08144 | opp_overlap 2967188, overlap 2967204 TACGCGCTGCAGCCC CAGGGCG CTCA CGCCTTG TTTCTGATTGGTCAG TERM 2364 2967701 - 2967715 + H 100 -7.1 -5.75342 | CAATCCACCACTTCC GCACC CAATT GGTGC TTTTTTTTGAGAACA TERM 2365 2967738 - 2967762 + H 100 -15.7 -4.51196 | opp_overlap 2967748 2967749, overlap 2967758 TGAGAACATGCCTTG GCCCGGACAAC CCC GTTGCCCGGGC TTTTGTCCGTTTGAG TERM 2366 2967777 - 2967799 + H 85 -14.8 -3.6003 | CTTTTGTCCGTTTGA GCGCGGCTGC CCG GCAGACGCGC TTTCACCATCGTTTA Ajs_2805 2967830 - 2968237 + | GreA/GreB family elongation factor TERM 2367 2968265 - 2968282 + T 100 -8.4 -5.60993 | CACCCAAGACCCGAG GCAGCC ATGACG GGCTGC TTTTTTTGTCAGCGC Ajs_2806 2969454 - 2968291 - | acyltransferase 3 TERM 2368 2969496 - 2969467 - R 73 -11.4 -3.5485 | gap 1, overlap 2969463 2969461 CATTCAAAACAGGAA CCCCGT-GCCGGC AACAA GCCTGCGACGGGG GTTCACGGTAATCGG TERM 2369 2969602 - 2969584 - R 100 -17.4 -5.1356 | GCGCATCAACAAAAA CGGCGCCC CTG GGGCGCCG TTGGGCCAACGGGGC Ajs_2807 2970597 - 2969641 - | 2-nitropropane dioxygenase, NPD Ajs_2808 2972466 - 2970676 - | acyl-CoA dehydrogenase domain-containing protein TERM 2370 2971477 - 2971493 + g 79 -11.5 -3.86897 | GCTGCCGGCCACGCT GCCGTCC ACG GGGCGGC TTTGTACGCGGTCGC TERM 2371 2972510 - 2972527 + r 100 -11.3 -5.00616 | opp_overlap 2972510 TGTGATCAAAAAAAA GGCATCG CAAG CGATGCC TTTTTTGCCGGCGCA TERM 2372 2972527 - 2972510 - R 100 -11.3 -5.86061 | opp_overlap 2972510 TGTGATCAAAAAAAA GGCATCG CAAG CGATGCC TTTTTTGCCGGCGCA Ajs_2809 2973480 - 2972548 - | electron transfer flavoprotein, alpha subunit Ajs_2810 2974251 - 2973502 - | electron transfer flavoprotein beta-subunit Ajs_2811 2975696 - 2974413 - | MscS mechanosensitive ion channel TERM 2373 2975490 - 2975462 - G 73 -5.9 -4.30576 | overlap 2975463 GGCGCAGCAGGAAAA CCGCCTGGTAATG CTC CACCACCACGCGC GCCGCATACACCAGT Ajs_2812 2976534 - 2975716 - | enoyl-CoA hydratase TERM 2374 2976575 - 2976559 - R 83 -15.1 -3.17051 | overlap 2976557 TCCTGAGTACGAATA CCGCGCG GCG CGCGCGG GGAAGAATCAAAGGT Ajs_2813 2977542 - 2976583 - | histone deacetylase superfamily protein Ajs_2814 2977581 - 2978501 + | ATPase Ajs_2815 2978506 - 2979531 + | hypothetical protein Ajs_2816 2979631 - 2981697 + | transglutaminase domain-containing protein TERM 2375 2982196 - 2982218 + G 86 -16.2 -3.61398 | TTCCCGACGCACACC CGCGCGCGGC CGA GCGGCGCGCG TTCTTCCAGCGCGAG Ajs_2817 2981694 - 2982767 + | lytic murein transglycosylase B Ajs_2818 2983695 - 2982781 - | LysR family transcriptional regulator TERM 2376 2982899 - 2982878 - G 75 -4.3 -4.68593 | overlap 2982880 TGGAGCAGCGAAAAA TGGCGCCAC ATGC GCGGCAGCA GGGTAGACAGCAGCA TERM 2377 2983750 - 2983732 - H 75 -3.2 -4.8667 | opp_overlap 2983733, overlap 2983733 TAGATTTTACAAAAA GTATTTGT TAT ACAAATAT AACTAATATTTCTAA Ajs_2819 2983809 - 2984891 + | hypothetical protein Ajs_2820 2986205 - 2984892 - | putative transporter signal peptide protein TERM 2378 2985880 - 2985853 - G 100 -17.7 -3.78775 | overlap 2985854 CCCTGCATGACGAAA CGCGCGCCGCC GTCAAT GGCGGCGCGCA GCGCGGACAGCGCCT TERM 2379 2985879 - 2985854 - G 89 -19 -2.87051 | overlap 2985853 CCTGCATGACGAAAC GCGCGCCGCC GTCAAT GGCGGCGCGC AGCGCGGACAGCGCC Ajs_2821 2987067 - 2986258 - | putative lipoprotein Ajs_2822 2987279 - 2987719 + | CS protein TERM 2380 2987747 - 2987766 + T 100 -16.4 -4.48903 | CGTCGCCTGATTCCA GGGCGGCC GGGT GGCCGCCC TTTTGCTATGTTTTA TERM 2381 2987805 - 2987820 + T 95 -10.4 -4.63527 | CTACCGCTTACCGGA TGGGCG CTAC CGCCCA TTTTTAACCTGATCC Ajs_2823 2989183 - 2987975 - | hypothetical protein Ajs_2824 2989950 - 2989180 - | ABC transporter related Ajs_2825 2991347 - 2989947 - | Fis family transcriptional regulator Ajs_2826 2992846 - 2991419 - | RND efflux system outer membrane lipoprotein TERM 2382 2991474 - 2991526 + g 73 -13.9 -3.12351 | CGCACATGGTCGGTA CTCACGCTGGCGGCCGTGCTGGCCA CGC TGTCCTGCGCGGACAGCAGCGTGCG TTGGGTGTCCAGCAC Ajs_2827 2993005 - 2994456 + | aldehyde dehydrogenase TERM 2383 2994512 - 2994471 - T 75 -4.4 -4.72272 | gap 1, opp_overlap 2994473 2994475 2994476, overlap 2994472 2994473 GCCCGCTATCAAAAA TGTGAGCTACCAGCGCTTG ATGGA CAAGCGCTGG-AGCCTATT TTGATCCATATCTTC TERM 2384 2994473 - 2994510 + T 89 -11.4 -4.3014 | gap 1, opp_overlap 2994473 2994472 2994471, overlap 2994475 2994476 CCGCTATCAAAAATG TGAGCTACCAGCGCTTG ATGGA CAAGCGCTGG-AGCCTA TTTTGATCCATATCT TERM 2385 2994475 - 2994508 + T 78 -11.8 -3.74902 | gap 1, opp_overlap 2994473 2994472 2994471, overlap 2994473 2994476 GCTATCAAAAATGTG AGCTACCAGCGCTTG ATGGA CAAGCGCTGG-AGCC TATTTTGATCCATAT TERM 2386 2994476 - 2994507 + T 79 -15.3 -2.84218 | gap 1, opp_overlap 2994473 2994472 2994471, overlap 2994475 2994473 CTATCAAAAATGTGA GCTACCAGCGCTTG ATGGA CAAGCGCTGG-AGC CTATTTTGATCCATA Ajs_2828 2995629 - 2994526 - | O-sialoglycoprotein endopeptidase Ajs_2829 2996831 - 2995653 - | extracellular ligand-binding receptor Ajs_2830 2996974 - 2997594 + | response regulator receiver/ANTAR domain-containing protein TERM 2387 2997686 - 2997670 - f 74 -2.2 -4.9138 | gap 1, overlap 2997672 AGCATTCAAACAAAA CGGG-GC TGGA ACGCCCG ACCATCAAGCGCAGA TERM 2388 2997821 - 2997877 + F 100 -25.8 -4.7629 | gap 1, opp_overlap 2997821 GGCTCCCAGGACAAA GGCGTCCCCAC-CCGCTCGGACAGCGC ACAT GCGCCGGCCGCGCGGCGTGAGGACGCC TTTTTCCGTTGCTGC TERM 2389 2997877 - 2997821 - f 100 -30.2 -3.96148 | gap 1, opp_overlap 2997821 GGCTCCCAGGACAAA GGCGTCCCCAC-CCGCTCGGACAGCGC ACAT GCGCCGGCCGCGCGGCGTGAGGACGCC TTTTTCCGTTGCTGC TERM 2390 2998669 - 2998657 - g 75 -9.1 -4.12188 | GGACCACCCCGAAAA GGTGC TGG GCACC ACCGCCGACTTCGTG Ajs_2831 2997926 - 2999170 + | twin-arginine translocation pathway signal Ajs_2832 2999205 - 3000146 + | nitrate ABC transporter, inner membrane subunit Ajs_2833 3000143 - 3000946 + | nitrate ABC transporter, ATPase subunits C and D TERM 2391 3000955 - 3000990 + T 81 -7.6 -4.50218 | gap 1, overlap 3000957 GGCTTGAGGGTTTTT GGGCT-CTAGCGCTTGC TGG GTAAGCGCTGGCAGCTA TTGTTTTTGATCATT TERM 2392 3000957 - 3000988 + T 81 -12.4 -3.84027 | gap 1, overlap 3000955 CTTGAGGGTTTTTGG GCT-CTAGCGCTTGC TGG GTAAGCGCTGGCAGC TATTGTTTTTGATCA Ajs_2834 3001560 - 3001123 - | signal-transduction protein Ajs_2835 3002408 - 3001740 - | hypothetical protein TERM 2393 3002379 - 3002363 - G 83 -12.3 -4.08216 | GCAGGTGCTGCAAAA GCTGCTG GGT CAGCAGC GGGGTCGATGCGGAA Ajs_2836 3002785 - 3004125 + | RND family efflux transporter MFP subunit TERM 2394 3005760 - 3005736 - g 80 -15.7 -3.26471 | CCACTTCGAGACCAA CACGCTGCGCT ACC AGCGCGGCGTG GGCTGGATGCTGCAC TERM 2395 3006643 - 3006609 - g 73 -12.9 -3.30124 | GCTCATGCGCTACAA CGGCGC-GCCCGCCTAT GAG AT-GGTGGGCAGCGCCG CGCCGGGCGTCAGCT Ajs_2837 3004144 - 3007311 + | hydrophobe/amphiphile efflux-1 (HAE1) family protein TERM 2396 3008006 - 3008039 + G 73 -13.2 -3.2614 | opp_overlap 3007966 GGCGCAGGCCCAGTC GGCGGCCGACA-CCGC ACGC GTGGATG-CGGCCGCC TTCGTCTCGCAGCTG Ajs_2838 3007308 - 3008894 + | RND efflux system outer membrane lipoprotein TERM 2397 3009337 - 3009288 - f 100 -23 -3.14132 | opp_overlap 3009288 GGCTCGCGGGACGAA GGCGTCCCCAC-CCGCAACCAGGC CCCT GCCCGG-TGCGGCGTGCGGACGCC TTTTTTGTTGATGTG TERM 2398 3009288 - 3009337 + F 100 -20.8 -5.5353 | opp_overlap 3009288 GGCTCGCGGGACGAA GGCGTCCCCAC-CCGCAACCAGGC CCCT GCCCGGT-GCGGCGTGCGGACGCC TTTTTTGTTGATGTG Ajs_2839 3009383 - 3011848 + | assimilatory nitrite reductase (NAD(P)H) large subunit precursor Ajs_2840 3011925 - 3012314 + | assimilatory nitrite reductase (NAD(P)H) small subunit TERM 2399 3012354 - 3012305 - f 88 -14.9 -3.75153 | gap 1, overlap 3012309 GCGCTGCAAGGCAAA CCCACCATGACCCCGCGCAGGCGC AAC GCGCC-GCGCAAGGCCAGGCCGAG CGCAGCGATGGCCCG TERM 2400 3012349 - 3012309 - f 80 -16.2 -2.68071 | gap 2, overlap 3012305 TGCAAGGCAAACCCA CCATGACCCCGCGCAGGCGC AAC GCGCC-GCGCAAGGCCA-GG CCGAGCGCAGCGATG TERM 2401 3012604 - 3012579 - f 86 -6.7 -4.99947 | overlap 3012582 3012583 GCGAAGCAAAGAAAA GTACCTCGCCC GCCG GGGCGAGTCCC GGCCAGCCACGTCCA TERM 2402 3014770 - 3014811 + G 73 -13 -3.33492 | gap 2, opp_overlap 3014748 GGGCGCTCCAGCACG GGCCGGCCGCTGGCGGGCGT GAAC GCGCTCACCA-C-GCCGGCC TTCTGCCCTGGCTCC Ajs_2841 3012685 - 3015543 + | assimilatory nitrate reductase (NADH) alpha subunit apoprotein TERM 2403 3015716 - 3015665 - g 77 -10.1 -3.98683 | gap 2 ACTACATCAAGGAAA TCGGCCGCGGCGCACGCGGCGCCAA GGCA CTGG-ACCGCGCGCAA-GCCGCCGA CCTGTTCGGGCAAGT Ajs_2842 3015637 - 3016566 + | hypothetical protein Ajs_2843 3016563 - 3017372 + | uroporphyrinogen-III C-methyltransferase Ajs_2844 3017877 - 3017377 - | thioesterase superfamily protein TERM 2404 3017943 - 3017964 + H 74 -5.7 -4.39696 | CTTCACCCGCCACGC CCGTGTCAC ACCC GCGTCACGG TTTCTTGGTTTCCCC Ajs_2845 3018071 - 3019237 + | extracellular ligand-binding receptor Ajs_2846 3019308 - 3020549 + | hypothetical protein Ajs_2847 3020652 - 3021857 + | NnrS family protein Ajs_2848 3021928 - 3022227 + | hypothetical protein TERM 2405 3022281 - 3022251 - T 87 -17 -2.95652 | opp_overlap 3022256, overlap 3022256 GCCACTCAACCAAAG CAAAAGGGGCAGGT ATC ACCTGCCCCTTTTT GATCGTCCCTGCTTC TERM 2406 3022276 - 3022256 - T 100 -16.9 -4.62054 | opp_overlap 3022256, overlap 3022251 TCAACCAAAGCAAAA GGGGCAGGT ATC ACCTGCCCC TTTTTGATCGTCCCT TERM 2407 3022256 - 3022276 + T 100 -16.9 -4.77438 | opp_overlap 3022251 3022256 TCAACCAAAGCAAAA GGGGCAGGT ATC ACCTGCCCC TTTTTGATCGTCCCT Ajs_2849 3022852 - 3022295 - | hypothetical protein Ajs_2850 3023328 - 3022849 - | NifU family SUF system FeS assembly protein Ajs_2851 3024590 - 3023325 - | aminotransferase, class V Ajs_2852 3025830 - 3024583 - | SufBD protein TERM 2408 3024901 - 3024869 - G 77 -11.1 -3.78775 | GGGCGCAGGATCAAA CGTGGCTGGCCCGCC AGC GGCACGCCGGCCAGG CGCTGGCGCACATCG Ajs_2853 3026605 - 3025835 - | FeS assembly ATPase SufC Ajs_2854 3028179 - 3026686 - | cysteine desulfurase activator complex subunit SufB TERM 2409 3026863 - 3026839 - G 71 -2.7 -4.63218 | overlap 3026842 3026856 3026857 CTGCTGGCAATAAAA CAGGCGCTCCT CCG AAATGCGCGTG GTGGTGGCCTCGTGC TERM 2410 3027999 - 3027988 - G 74 -2.2 -4.7373 | gap 1, opp_overlap 3027964, overlap 3027989 CCAGTCCAGCAAAAA CTGCG GCT CGC-G TTTCTTGCGCGAGAT TERM 2411 3028118 - 3028079 - G 79 -13.4 -3.72695 | ACGTCGGTGACGAAA CCATGCTGGTACGGGCGC TGCA GCGCCTGCTCCAGCGCGG GCGCCTGCGACGCCT Ajs_2855 3029129 - 3028332 - | ArsR family transcriptional regulator Ajs_2856 3029160 - 3029513 + | NIPSNAP family protein TERM 2412 3029579 - 3029548 - g 78 -15.1 -3.21747 | opp_overlap 3029569 3029570 GCAGCCGAGCAGCAA CGGCCGCCAGGCC TACCTG GACCTGGCGGCGG ACCTGCGCGCCGCGC Ajs_2857 3029510 - 3029914 + | antibiotic biosynthesis monooxygenase rpsU 3030044 - 3030256 + | 30S ribosomal protein S21 TERM 2413 3030284 - 3030323 + F 100 -19.4 -4.39002 | opp_overlap 3030291, overlap 3030291 GTTGACACCAGACGC CACAAAACCCGCGCTAGG GACG CCAAGCGCGGGTTTTTTG TTTTCTACACCGTTT TERM 2414 3030316 - 3030291 - f 100 -16.1 -4.41548 | opp_overlap 3030291 3030284 CCAGACGCCACAAAA CCCGCGCTAGG GACG CCAAGCGCGGG TTTTTTGTTTTCTAC TERM 2415 3030291 - 3030316 + F 100 -16.1 -5.86976 | opp_overlap 3030291, overlap 3030284 CCAGACGCCACAAAA CCCGCGCTAGG GACG CCAAGCGCGGG TTTTTTGTTTTCTAC TERM 2416 3030605 - 3030593 - g 76 -6.2 -4.48987 | overlap 3030602 GGCCGACAAGGAAAA GGCC GAAAT GGCC GTGCTGCAGGCCTAC Ajs_2859 3030354 - 3030815 + | GatB/Yqey domain-containing protein TERM 2417 3032197 - 3032164 - g 72 -5.1 -4.34947 | gap 1 AAGAGATCATCAAAA GCGGC-CCGCGCACGC CAG ACCTGGGCGGTGCGGC AAGCACCACGCAGGT Ajs_2860 3031155 - 3032249 + | tartrate dehydrogenase Ajs_2861 3032454 - 3032726 + | hypothetical protein Ajs_2862 3032723 - 3033724 + | cation diffusion facilitator family transporter Ajs_2863 3033736 - 3034380 + | hypothetical protein Ajs_2864 3034406 - 3034837 + | glutathione-dependent formaldehyde-activating, GFA TERM 2418 3034891 - 3034881 - f 72 -2.4 -4.72272 | overlap 3034882 3034883 CGTTGCGATCAAAAA GGGC CAG GCGC AAGGCGCCAAACGAA TERM 2419 3034925 - 3034907 - f 83 -14.6 -3.51976 | overlap 3034903 AAGGCGCCAAACGAA GCTGGGGT GCT ACCCCAGC GAGGCTTGGCAACGC Ajs_2865 3035182 - 3036261 + | integrase catalytic subunit Ajs_2866 3036370 - 3037458 + | transposase, IS4 family protein TERM 2420 3037854 - 3037874 + G 73 -13.9 -3.14132 | GGCAACGCTCCCTAC GGCGACGCC AAG GGCGACGCC TTCGTGCAGCAGCGC TERM 2421 3038069 - 3038108 + G 74 -12.1 -3.54424 | gap 1 CCAGACGCACCACGT GGGCGTGCTGGCCACGCG CGGCA CG-GTGGGCAGCGCGCGC TTTCAGCGCCTGCGC Ajs_2867 3037716 - 3038591 + | glutamate racemase TERM 2422 3038607 - 3038642 + T 85 -6.2 -5.09225 | gap 1, opp_overlap 3038607, overlap 3038609 3038639 TATTTAAGCCAAAAC GGGCTG-CAGCGCTT ACCTATC AAGCGCTGGCAGCTA TTTTTTCAATAGCAT TERM 2423 3038609 - 3038640 + T 84 -11 -4.17608 | gap 1, opp_overlap 3038607, overlap 3038607 3038639 TTTAAGCCAAAACGG GCTG-CAGCGCTT ACCTATC AAGCGCTGGCAGC TATTTTTTCAATAGC Ajs_2868 3039174 - 3038659 - | hypothetical protein Ajs_2869 3040228 - 3039239 - | hypothetical protein TERM 2424 3039643 - 3039675 + g 72 -13.3 -3.13522 | overlap 3039639 3039642 3039645 GCAGGTCCTGCAGCG CGGGGCCCGTGCCCT TGT AGGGCACGTGCACCA TCTTGATGCCGCCCT Ajs_2870 3041277 - 3040276 - | hypothetical protein TERM 2425 3040551 - 3040564 + g 83 -9.5 -4.4078 | TGGGCACGTCGGGCA GCGCG GCGA CGCGC TTTTCGTTCACCACG Ajs_2871 3042297 - 3041314 - | hydroxymethylglutaryl-CoA lyase Ajs_2872 3043514 - 3042294 - | L-carnitine dehydratase/bile acid-inducible protein F TERM 2426 3042807 - 3042856 + g 70 -10.5 -3.66874 | gap 1 GCCCGGCAGCGCGCT GCCCGCGGCCTCGCGCACGGCGCC AAA GGCGCTGTACTCGGGGAT-CAGGC TTTCCATGCAGTTGA TERM 2427 3043769 - 3043718 - g 74 -14.5 -3.01712 | gap 3, overlap 3043688 3043720 CGCCGCGCGCGAACA CATCGCGCCCTCC-GC-C-GCCAGCC GCC GCCTGGCCGAGCTGGAGGACGCGCTG CGCGTGGAGCTGTTC TERM 2428 3044274 - 3044246 - g 73 -10.9 -3.72324 | CAGCGCCATCAACAA CCTGCTCACACGC GCC GCGGCCGAGCAGG AGATGCCGCTCAAGC Ajs_2873 3043635 - 3044534 + | LysR family transcriptional regulator TERM 2429 3045238 - 3045228 - g 93 -6.8 -5.1287 | TTGAGAGTCAAAAAA GCCT CCA AGGC TCATACAGCAAGCGC Ajs_2874 3044531 - 3045643 + | hypothetical protein Ajs_2875 3045810 - 3046364 + | elongation factor P TERM 2430 3046374 - 3046391 + T 73 -12.7 -3.13403 | opp_overlap 3046349 3046371 3046370, overlap 3046372 GTCTAAGAACACCTT GCGTCCG GCCG CGGACGC TGTTCATGCAAGGGG TERM 2431 3046404 - 3046426 + T 100 -15.6 -5.4505 | opp_overlap 3046403 CGCTGTTCATGCAAG GGGAGCGTGT CAT GCACGCTCCC TTTTTTATTGAGGAC Ajs_2876 3046985 - 3046479 - | hypothetical protein TERM 2432 3046995 - 3046979 - G 85 -10.1 -4.1899 | overlap 3046990 GTACGTGATGGAAAA GCGGCAT GGA ACGCCGC ACGAGCCCAGCGTCG Ajs_2877 3049172 - 3047085 - | Na+/solute symporter Ajs_2878 3049482 - 3049165 - | hypothetical protein Ajs_2879 3051893 - 3049503 - | phosphoenolpyruvate synthase TERM 2433 3051618 - 3051597 - G 70 -10.1 -3.72893 | opp_overlap 3051572 3051571 CAGGTCGGCAGGAAA CGGCTGGTT TTCT ACCCAGCCG CGGATCTCGGCCCCC TERM 2434 3052279 - 3052260 - g 80 -15 -3.43492 | CGATACCGAGGACAA GGCGCACC AGGT GGTGCGCC AGATCAACCACACGG Ajs_2880 3052117 - 3052947 + | hypothetical protein TERM 2435 3052985 - 3052970 - T 93 -8.2 -5.13722 | opp_overlap 3052970 TGCATCAAAACAAAA GCGCCC CGAA AGGCGC TTTGTTTTTGATAGC TERM 2436 3052970 - 3052985 + T 88 -7.5 -4.91852 | opp_overlap 3052970 TGCATCAAAACAAAA GCGCC CCGAAA GGCGC TTTGTTTTTGATAGC Ajs_2881 3054604 - 3053048 - | FAD-dependent pyridine nucleotide-disulphide oxidoreductase TERM 2437 3053390 - 3053408 + g 81 -5.2 -4.82901 | CAGGATGACCGTCAC GTTGGGCA GGC TGCGCAGC TTTTTCTGCAGCACG TERM 2438 3054664 - 3054644 - R 100 -16.1 -5.76949 | opp_overlap 3054648 TATGGGCAAAAAAAA CCCGGGCGC CTG GCACCCGGG CGTCTTGGTCAGCCG TERM 2439 3054648 - 3054668 + r 73 -12.5 -3.14132 | opp_overlap 3054644 GGCAAAAAAAACCCG GGCGCCTGG CAC CCGGGCGTC TTGGTCAGCCGCCGC Ajs_2882 3055273 - 3054710 - | alkyl hydroperoxide reductase subunit C TERM 2440 3055442 - 3055486 + H 100 -18 -3.91897 | gap 1, opp_overlap 3055432 3055431 3055481, overlap 3055413 CAAAGCCTGCATGCA GGGGCATTGTCTTGCCCCCTG GTGC CAGGGT-CATGACAATGCCCC TTTCTGACTGAAAGG Ajs_2883 3055511 - 3055987 + | bacterioferritin TERM 2441 3056053 - 3056066 + F 100 -9.5 -5.17353 | opp_overlap 3056053 GTGCACTCCATCCAA CGGGC TGCG GCCCG TTTTTTCATGCCTGT Ajs_2884 3056292 - 3056621 + | flagellar transcriptional activator, FlhD subunit Ajs_2885 3056663 - 3057202 + | transcriptional activator FlhC Ajs_2886 3057856 - 3057284 - | hypothetical protein Ajs_2887 3058467 - 3057853 - | hypothetical protein Ajs_2888 3060748 - 3058565 - | YccS/YhfK family integral membrane protein TERM 2442 3059162 - 3059144 - G 72 -8.8 -4.06786 | AGGCAATACCAGAAA CATGGCGG CCG CCGCGATG AGACTGCCGATCACC TERM 2443 3060641 - 3060605 - G 72 -13 -3.15861 | gap 1, overlap 3060607 GAGCACGCCCAGGAA CAGCGGCAC-CACCAGG TCCA CCTGGTGCGTGCCCCAG CTCCAGGCCATGGCG TERM 2444 3060639 - 3060607 - G 73 -14.2 -3.14051 | gap 1, overlap 3060605 GCACGCCCAGGAACA GCGGCAC-CACCAGG TCCA CCTGGTGCGTGCCCC AGCTCCAGGCCATGG Ajs_2889 3063608 - 3060759 - | phosphoenolpyruvate carboxylase TERM 2445 3063205 - 3063156 - G 76 -15.8 -2.87344 | gap 3 CACGGGCGCCACATA GCTGGTGGCCAGCGTCTGCGCCACG GTG CGCGGCGC-GATGCCGGC--CCAGC GCAGGCGCGCCAGCG TERM 2446 3063566 - 3063586 + g 79 -16.1 -3.01712 | TCTTGCGGGCGGGCG CCGGCGCCG CGG CGGCGTCGG TCTTGCGGGCGGGGG Ajs_2890 3063703 - 3064665 + | porphobilinogen deaminase TERM 2447 3064848 - 3064888 + G 84 -9 -4.46112 | gap 1, overlap 3064844 GCACGGATGGACCGC TACTGCGCGGTGATGTTCG TGAG CGG-CAACGCGGCGCAGTA TTTCTTTGAATCAAA TERM 2448 3065390 - 3065411 + G 77 -12.9 -3.54424 | overlap 3065400 CCACCCGCGTATCGC GCAGGCCGC ACGT GCGGCCGGC TTTGGCAGCGTGCAC Ajs_2891 3064668 - 3065486 + | uroporphyrinogen-III synthase Ajs_2892 3065476 - 3066552 + | protein of unknown function DUF513, hemX TERM 2449 3066617 - 3066662 + G 74 -10.5 -3.78934 | gap 1, overlap 3066609 CCTGTTCGGTGTGGC CGTTGCCGTCGCCCTGTTTG CGGGCAA CAACCAGGGC-ACGGTCACG TTGTTCTGGCCGCCC Ajs_2893 3066576 - 3067859 + | HemY domain-containing protein Ajs_2894 3068838 - 3067876 - | transposase IS116/IS110/IS902 family protein TERM 2450 3069106 - 3069119 + H 72 -4.5 -4.67234 | GCGGCTGCGCCATGC CTGCT GGAC AGCGG TTTTTCAAATTCACT TERM 2451 3069781 - 3069758 - g 73 -13.1 -3.3482 | CAATGGCGCAAGGAA CGCGCCGGC GGCCAT GCCAGCGCG CCGCTCAAACCCCAG Ajs_2895 3069221 - 3069841 + | glyoxalase/bleomycin resistance protein/dioxygenase TERM 2452 3069857 - 3069845 - f 81 -6.9 -4.72272 | opp_overlap 3069845, overlap 3069847 GGGTCTGAGTAAAAA GCGCC TCC AGCGC TTATCCAGCAAGCGC TERM 2453 3069945 - 3069964 + G 100 -13.6 -4.87291 | opp_overlap 3069935 AACCACTGCCCCAGG CGGCATCC CACG GGATGCCG TTTTTCATTGCCATG TERM 2454 3071766 - 3071723 - g 71 -9.4 -3.85698 | gap 1 CCGCTGCTGGACAAA CGCACCCAGGGC-CTGCGCCG CCC CGAGACCGCGCCCAAGGTGCG CCAGAACACGCAAAA TERM 2455 3071802 - 3071782 - g 83 -9.7 -4.30441 | CCAGAACACGCAAAA GGAATTCCC CGA GGGCATTCC CGCCTATGGCGCCGA TERM 2456 3072215 - 3072188 - g 75 -13.4 -3.35371 | gap 1, opp_overlap 3072189 CAGACTGGCAACGAA GCGCAGCAGCGCG CCA CGCGCCGC-ACGC TGATCCGTGTGCTGG Ajs_2896 3069914 - 3072844 + | valyl-tRNA synthetase TERM 2457 3072864 - 3072886 + F 100 -15.6 -4.56597 | opp_overlap 3072867 AGCCCGATCACCGGA CAAGGGCGCT GCA GGCGCCCTTG TTTTTACCCGGCACC Ajs_2897 3072923 - 3073810 + | UDP-glucose pyrophosphorylase Ajs_2898 3074149 - 3073922 - | SirA family protein Ajs_2899 3074718 - 3074155 - | NUDIX hydrolase cysM 3075739 - 3074834 - | cysteine synthase B TERM 2458 3074878 - 3074903 + g 70 -6.2 -4.28361 | AGCGGTCGCCCCGGT CGCACACCA-CG AAAA CGATGGTG-GCG TTTTCCTCGCGTTGC TERM 2459 3075114 - 3075149 + g 83 -14 -3.78934 | gap 1, overlap 3075115 GGGATACGCGAGCCT TCCTGCGGCTGCGCACC CAC GATGCGCA-CCGCGGGG TTCTTCTCGCGCAGG TERM 2460 3075115 - 3075148 + g 76 -15.3 -2.87146 | gap 1, overlap 3075114 GGATACGCGAGCCTT CCTGCGGCTGCGCACC CAC GATGCGCA-CCGCGGG GTTCTTCTCGCGCAG TERM 2461 3076340 - 3076365 + r 100 -18.3 -4.99435 | opp_overlap 3076340 GGCACCAATTCGAAA GCCGCCCCTGT TCAC GCAGGGGCGGC TTTTTCGTTCTTGGC TERM 2462 3076365 - 3076340 - R 100 -17.6 -3.67976 | opp_overlap 3076340 GGCACCAATTCGAAA GCCGCCCCTG TTCACG CAGGGGCGGC TTTTTCGTTCTTGGC Ajs_2901 3076593 - 3076351 - | hypothetical protein TERM 2463 3076557 - 3076576 + g 73 -10.6 -3.75738 | CGCTCTCGGTCTTGG GCAGCGGC CCGA GCCGCAGC TTCTTGGTCGTGCTC Ajs_2902 3077852 - 3076590 - | conjugation TrbI family protein Ajs_2903 3078834 - 3077854 - | conjugal transfer protein TrbG/VirB9/CagX Ajs_2904 3079535 - 3078831 - | conjugal transfer protein TERM 2464 3079051 - 3078999 - G 71 -9.2 -3.85698 | gap 3, opp_overlap 3079036 CGCGCCGTTGACAAA GCGCGTCTC-CGTCCAGCG-CACGT TGAAAG ACGTGTCGCTGG-CGCGGGTCACGC TGGTGATCTGCACCG Ajs_2905 3080888 - 3079554 - | TrbL/VirB6 plasmid conjugal transfer protein Ajs_2906 3081208 - 3080885 - | putative lipoprotein TERM 2465 3081179 - 3081141 - G 72 -13.9 -3.07935 | gap 1, overlap 3081145 AGCGCATCGACCGAA GGCACCTCCTGCTGGCCG CAGC CGGCCAGCAGGAG-CACA AAACCGCAGAGAGCA TERM 2466 3081176 - 3081145 - G 95 -20.2 -2.55213 | overlap 3081141 CATCGACCGAAGGCA CCTCCTGCTGGCCG CAGC CGGCCAGCAGGAGC ACAAAACCGCAGAGA Ajs_2907 3081948 - 3081220 - | putative conjugal transfer TrbJ signal peptide protein Ajs_2908 3084380 - 3081945 - | AAA ATPase Ajs_2909 3084662 - 3084390 - | putative conjugal transfer TrbD transmembrane protein Ajs_2910 3085036 - 3084659 - | conjugal transfer protein TrbC Ajs_2911 3086067 - 3085033 - | type II secretion system protein E TERM 2467 3086101 - 3086058 - G 77 -13.9 -3.45366 | gap 2 CGGTGAAGGAAGGAA CGGCGCTCAT-GACG-CGCGC TCCT GCGCGTCGTCCATGCGTGCCG GGTCTGGATGCAGTT Ajs_2912 3086510 - 3086064 - | CopG/DNA-binding domain-containing protein Ajs_2913 3088504 - 3086507 - | TRAG family protein TERM 2468 3088568 - 3088549 - R 73 -11.4 -3.67597 | overlap 3088559 TTCCTCATGGAAGAA GCGGCACA AGGG CGTGCCGC AGGCGTCAGGATCGG TERM 2469 3088697 - 3088671 - R 100 -14.5 -5.30616 | gap 1 CGAGCCAAAGAAAAA CGCCGCAA-GCG CGGG CGCATTGCGGCG TGTCGAGAAAAAAGT Ajs_2915 3089018 - 3088740 - | putative lipoprotein Ajs_2916 3090665 - 3089151 - | transposase IS66 Ajs_2917 3091057 - 3090746 - | IS66 Orf2 family protein Ajs_2918 3091530 - 3091078 - | transposase IS3/IS911 family protein TERM 2470 3091309 - 3091296 - G 70 -5.9 -4.18934 | CAGCATCCGAACAAA CGCCC GGTT GAGCG CGCACAGGGCCCGCC Ajs_2919 3092432 - 3091527 - | LysR family transcriptional regulator TERM 2471 3092364 - 3092387 + g 74 -12.4 -3.61398 | opp_overlap 3092356 TTCAATATGCAGCTT CTCCGCTGCG CGAG CGAAGCGGAG TTCTTCGGCCACAGC Ajs_2920 3092786 - 3092469 - | hypothetical protein Ajs_2921 3093846 - 3092812 - | secretion protein HlyD family protein TERM 2472 3093632 - 3093649 + g 73 -4 -4.63486 | overlap 3093646 GCTGCGAGCAAATCC CCTGCC TTCACT GGCTGG TTTTCTTCGACCAGT Ajs_2923 3095569 - 3094607 - | transposase IS116/IS110/IS902 family protein Ajs_2924 3098143 - 3096608 - | RND efflux system outer membrane lipoprotein TERM 2473 3097755 - 3097722 - G 73 -9.5 -3.89614 | gap 1 CCCAACTGCCAGAAA TCGCTCGCGCTCGTCG GTG CGCCCAGCGCG-GCAA ACTTGCCGTGCTCGC TERM 2474 3098171 - 3098183 + H 71 -4.8 -4.52589 | overlap 3098162 AGTATACGAGTTGTA CCGA ACCGC TCGG TTTTATATCGCGGCA Ajs_2925 3098244 - 3099023 + | TetR family transcriptional regulator Ajs_2926 3099023 - 3099514 + | MarR family transcriptional regulator Ajs_2927 3099511 - 3100470 + | transposase, IS4 family protein TERM 2475 3102752 - 3102774 + T 100 -10.5 -4.7033 | overlap 3102753 GTGCAGACAGGCTTT CGACGCGGC CCGGT GCCGCGTCC TTTTGTCTTGCCTTC TERM 2476 3102753 - 3102773 + T 79 -14 -3.41114 | overlap 3102752 TGCAGACAGGCTTTC GACGCGGC CCGGT GCCGCGTC CTTTTGTCTTGCCTT Ajs_2929 3103658 - 3103047 - | TraF peptidase Ajs_2930 3104200 - 3103655 - | hypothetical protein TERM 2477 3103887 - 3103914 + g 75 -12 -3.65351 | gap 1, overlap 3103871 TGCACGCCGGGGATG CGCTGCGCGCCGT CCA GCGGCGTGCA-CG TTTGCATCACCATGA Ajs_2931 3104472 - 3104197 - | hypothetical protein Ajs_2932 3105107 - 3104469 - | cobyrinic acid a,c-diamide synthase TERM 2478 3105054 - 3105080 + g 82 -11.6 -4.05714 | gap 1, overlap 3105022 GCCCGCGATGTGGGT GGCGAGCGTGG TCTTGC CCACGC-CGCC TTTCTGGTTGAGCAT TERM 2479 3105253 - 3105268 + r 73 -3.2 -4.69053 | overlap 3105246 3105255 AAACCCGCGCCAGCA TTGGCT TTGC GGCCGA TTTTGTTGCCTGATA Ajs_2933 3106218 - 3105361 - | putative replication initiator and transcription repressor protein Ajs_2934 3106565 - 3106245 - | hypothetical protein Ajs_2935 3107383 - 3106634 - | hypothetical protein Ajs_2936 3108072 - 3107725 - | putative lipoprotein TERM 2480 3108171 - 3108144 - H 82 -5.5 -4.82901 | opp_overlap 3108146 3108147, overlap 3108145 3108152 CGGGTTTGAGAAAAA GCACGCAAGCG GCTTTG CGCTTCTGTGC GAAGCCGCTGATACG Ajs_2937 3108295 - 3108588 + | helix-turn-helix domain-containing protein Ajs_2938 3108818 - 3109861 + | hypothetical protein Ajs_2939 3110518 - 3110204 - | hypothetical protein Ajs_2941 3112142 - 3111327 - | hypothetical protein TERM 2481 3112234 - 3112205 - R 76 -13.7 -3.21962 | gap 1, overlap 3112208 ATAGGAGCAATGGAA GAAGGCATCGC-GC GGT ACAGCGATGCCTTC AACGCCGCCGCCTGA TERM 2482 3112231 - 3112208 - R 71 -9.6 -3.74526 | gap 1, overlap 3112205 GGAGCAATGGAAGAA GGCATCGC-GC GGT ACAGCGATGCC TTCAACGCCGCCGCC TERM 2483 3112237 - 3112270 + r 85 -15.9 -3.52093 | CAGCGATGCCTTCAA CGCCGCCGCCTGAGT GCCA GCGAAGGCGGCGGCG TTCTGATTCGGCTGT TERM 2484 3112298 - 3112325 + r 100 -19.8 -3.68222 | opp_overlap 3112299, overlap 3112299 TGTCGGGCCTTCAAC ACCGGGCGCGGC CACT GCCGCGCCCGGA TTCTTGAAGTTCACC TERM 2485 3112324 - 3112299 - R 100 -23.3 -3.01712 | opp_overlap 3112298 3112299 GTCGGGCCTTCAACA CCGGGCGCGGC CACT GCCGCGCCCGG ATTCTTGAAGTTCAC TERM 2486 3112299 - 3112324 + r 100 -23.3 -2.80612 | opp_overlap 3112299, overlap 3112298 GTCGGGCCTTCAACA CCGGGCGCGGC CACT GCCGCGCCCGG ATTCTTGAAGTTCAC Ajs_2942 3112591 - 3112382 - | hypothetical protein TERM 2487 3112638 - 3112615 - R 73 -10.9 -3.65812 | opp_overlap 3112615 CTCTCTCCAAGAGAA GCGCCCCGG TCGAAT CCGTGGCGC TTGCCTTCGGTACGG Ajs_2943 3114706 - 3112655 - | nuclease Ajs_2944 3115608 - 3114781 - | hypothetical protein Ajs_2946 3116488 - 3116240 - | hypothetical protein Ajs_2947 3116573 - 3117457 + | ATPase involved in chromosome partitioning-like protein Ajs_2948 3117454 - 3117897 + | hypothetical protein TERM 2488 3118028 - 3117999 - f 81 -12.3 -3.89346 | opp_overlap 3117991 TGCGCACGCCAGAAA TGTCCGAAATATG ATAA CATCTTTCGGACA AATCGACTTTCTACG TERM 2489 3118503 - 3118534 + G 70 -10.8 -3.61178 | gap 1 AGTCGGCTCTATTGG GC-AGGACGACCAGC AAT GCGGGTCGTCCAAGC TTTGCGCTGGCTCAA Ajs_2949 3118086 - 3118799 + | hypothetical protein TERM 2490 3118943 - 3118932 - f 72 -7.2 -4.17491 | overlap 3118933 ACCAAATGCTGAAAA GCGC GACG GCGC TCGAACTTGCCGTCA Ajs_2950 3118990 - 3120165 + | 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase Ajs_2951 3120162 - 3120362 + | hypothetical protein TERM 2491 3120692 - 3120679 - g 77 -3.8 -4.75472 | TTCAGATCAACAAAA CCCT GGCGGA AGGG TTCGAAGTCACGCGC Ajs_2952 3120378 - 3122429 + | hypothetical protein TERM 2492 3123718 - 3123740 + G 83 -12.8 -4.09108 | GGACAACATCCGCCT CCATCGATCC AAA GGATTGATGG TTTCTCTAGCTTCGC Ajs_2953 3122618 - 3123988 + | hypothetical protein Ajs_2954 3123985 - 3124947 + | transposase, IS4 family protein TERM 2493 3125240 - 3125267 + G 100 -4.1 -5.75342 | GTCGTTCTTATCATT GGCGGAGGTAT TGGTGT GTACTTCCCCC TTTTTTTTGACCGCG Ajs_2955 3125159 - 3125647 + | hypothetical protein TERM 2494 3125823 - 3125812 - g 72 -5.8 -4.33819 | opp_overlap 3125811 ACGAGCGAGAACAAA GGAG GTTA CTCC ATATTCGGATCTCAA Ajs_2956 3125647 - 3126864 + | hypothetical protein Ajs_2957 3127334 - 3127020 - | putative transcriptional regulator Ajs_2958 3127662 - 3127312 - | hypothetical protein Ajs_2959 3129020 - 3127686 - | phage integrase family protein TERM 2495 3129254 - 3129289 + H 100 -11.2 -5.14563 | gap 1, opp_overlap 3129258, overlap 3129258 CCCCGGGCACCACAT ACAAGGCCGCACAGTTC CTA GAAC-GTGCGGCCTTTC TTTTTTCCTCCGAAA TERM 2496 3129285 - 3129258 - H 91 -16.4 -3.61902 | gap 1, opp_overlap 3129254 3129258 GGGCACCACATACAA GGCCGCACAGTTC CTA GAAC-GTGCGGCC TTTCTTTTTTCCTCC TERM 2497 3129258 - 3129285 + H 100 -16.4 -5.0917 | gap 1, opp_overlap 3129258, overlap 3129254 GGGCACCACATACAA GGCCGCACAGTTC CTA GAAC-GTGCGGCC TTTCTTTTTTCCTCC Ajs_2960 3129524 - 3129895 + | hypothetical protein Ajs_2961 3129919 - 3130179 + | translation initiation factor 1 Ajs_2962 3130256 - 3130564 + | RNP-1 like RNA-binding protein TERM 2498 3130706 - 3130745 + T 100 -17.2 -3.96148 | opp_overlap 3130714, overlap 3130708 CATCTCCTTCTTGGC CTCGAACACCCCGATGAC GAAA GTCGTCGGGGTGTTCGTC TTTGTGGTGGGGAGC TERM 2499 3130708 - 3130743 + T 100 -24.2 -3.57406 | opp_overlap 3130714, overlap 3130706 TCTCCTTCTTGGCCT CGAACACCCCGATGAC GAAA GTCGTCGGGGTGTTCG TCTTTGTGGTGGGGA Ajs_2963 3131299 - 3130811 - | hypothetical protein Ajs_2964 3132085 - 3131303 - | short-chain dehydrogenase/reductase SDR TERM 2500 3131960 - 3131933 - G 72 -12 -3.53012 | gap 1, overlap 3131934 GTGTTCGTGCGCAAA CGC-CGCCAGCAG CGC CTGCTGGCGTGCC GACACGATCACCTGC TERM 2501 3131959 - 3131934 - G 75 -15.5 -2.71712 | gap 1, overlap 3131933 TGTTCGTGCGCAAAC GC-CGCCAGCAG CGC CTGCTGGCGTGC CGACACGATCACCTG Ajs_2965 3132633 - 3132097 - | putative lipoprotein Ajs_2966 3133949 - 3132630 - | major facilitator superfamily transporter TERM 2502 3133207 - 3133194 - G 79 -2.3 -5.00616 | overlap 3133203 GTCCCGGGCAAAAAA CAGCA TCAA CGCCG CCGGAACTGCGCTGG TERM 2503 3133259 - 3133242 - G 84 -6.9 -4.82901 | overlap 3133245 3133254 3133255 GCCGTTGCACAAAAA CACCGCC AACA AGCGGCG AAAGGCCGGCTGGCG TERM 2504 3133911 - 3133860 - G 79 -10.6 -3.92522 | gap 1, overlap 3133861 CGGCAAGGCCACAAA GGCCAG-CGGCAGACCGAGCAGGCC ATA GGCCGGCCCGGACCACCAACGGGGC AGCGGAACCGCACGC Ajs_2967 3134404 - 3133946 - | hypothetical protein Ajs_2968 3136288 - 3134570 - | methyl-accepting chemotaxis sensory transducer Ajs_2969 3137542 - 3136322 - | cyclopropane-fatty-acyl-phospholipid synthase Ajs_2970 3138363 - 3137545 - | hypothetical protein Ajs_2971 3139664 - 3138360 - | FAD dependent oxidoreductase TERM 2505 3138793 - 3138805 + g 71 -9.1 -3.83409 | overlap 3138774 TGGTAGCGGATGGCA CCCAG CAC CTGGG TTTCCTGCTGTGTCG Ajs_2972 3139833 - 3140783 + | MerR family transcriptional regulator Ajs_2973 3140809 - 3141417 + | Lipocalin family protein Ajs_2974 3141877 - 3141548 - | hypothetical protein TERM 2506 3141991 - 3141981 - R 74 -4.6 -4.66953 | overlap 3141984 TCAACAGCGCAAAAA GACC ATC GGCC TCTCCCGGTGCTACC Ajs_2975 3142977 - 3142351 - | hypothetical protein Ajs_2976 3143202 - 3143576 + | LrgA family protein Ajs_2977 3143573 - 3144298 + | LrgB family protein Ajs_2978 3145273 - 3144320 - | LysR family transcriptional regulator TERM 2507 3146377 - 3146328 - g 82 -6.2 -4.82901 | GCTCGTGCAGAAAAA GCTGGCCGACATGCAGACCGAG ATCACG CTGGGCCTGCAGGCCGCGCTGC GCGTGGGCCGCATGA Ajs_2979 3145438 - 3146634 + | acyl-CoA dehydrogenase domain-containing protein Ajs_2980 3146787 - 3148043 + | L-carnitine dehydratase/bile acid-inducible protein F TERM 2508 3148053 - 3148073 + F 75 -14.7 -2.71364 | ATCTGACCCTTTTCC CGCACCGGT CCC GCCGGTGCG TCCTTCCCGCCATCA TERM 2509 3148371 - 3148331 - g 74 -10.1 -3.78934 | overlap 3148366 GGTGGTGGAGAACAA GGGCGGCGGCGGCGGCGCC ATC GGTGCGGCCGAAACCGCGC GCGCCACGCCGGACG Ajs_2981 3148134 - 3149102 + | hypothetical protein Ajs_2982 3150081 - 3149119 - | transposase IS116/IS110/IS902 family protein TERM 2510 3150311 - 3150329 + H 100 -13.1 -4.98531 | CCTCCACCCTCACCA GCCCCGC CACCC GCGGGGC TTTTTCGTTTGCGCC TERM 2511 3150507 - 3150476 - H 73 -10.8 -3.65046 | gap 1 CGCCCAGGGCAACAA CGACCTGTCGGCCCG CAC CGAGCAG-CAGGCCG GCGCGCTGGAGGAAA Ajs_2984 3151450 - 3152049 + | hypothetical protein Ajs_2985 3152059 - 3152706 + | hypothetical protein Ajs_2986 3153659 - 3152703 - | NAD-dependent epimerase/dehydratase TERM 2512 3153914 - 3153866 - g 79 -13.2 -3.68222 | gap 2, opp_overlap 3153908, overlap 3153905 GTGCAAGTGCAAGAA GCTCAGCGGCT-C-GGTGGTGCAC GGC GAGCACCAACAGAAGGCGCTGAGC ACCGAGGAGGAAGAA Ajs_2987 3153705 - 3154757 + | CDP-6-deoxy-delta-3,4-glucoseen reductase Ajs_2988 3155294 - 3154944 - | hypothetical protein TERM 2513 3155391 - 3155405 + H 81 -4.2 -5.02074 | overlap 3155384 3155392 AGCATTGCGGCGCCA CGGAAG CGT CTTCCA TTTTTTGCACAATGG Ajs_2989 3155427 - 3156398 + | hypothetical protein Ajs_2990 3157167 - 3156664 - | 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase Ajs_2991 3158774 - 3157179 - | poly(A) polymerase TERM 2514 3158114 - 3158156 + g 91 -11.9 -4.18934 | gap 1 TGCGCACGGGGTCCT CGCG-GTAGCGCGTGGCCGG GTCG CCGATCATGCGCAGCACGCG TTTCTTGGCGTCCTC TERM 2515 3158325 - 3158346 + g 72 -5.1 -4.4078 | overlap 3158325 GGCATGGTGCATGCC GGCCAGC TGGGCCTT GCTGGTC TTTTCGTTGCCCCCC TERM 2516 3158735 - 3158703 - G 74 -12.6 -3.53811 | gap 1, opp_overlap 3158720 3158725 CGCACGCTTGCCAAA GCGGCC-GCGCGTGC CACG GCCCGCGCCGGCGGC GCCTTTGCCCAGCAG Ajs_2992 3159472 - 3158771 - | HAD family hydrolase TERM 2517 3159247 - 3159209 - G 78 -15.9 -3.14344 | gap 1 CACCTCGCGCATGAA CTGCGCGTGCGCCAGGGC CGCC GCCTCGGCGC-CGCGCTG GCGAATGGCGTCGGT Ajs_2993 3160215 - 3159523 - | chromosomal replication initiator, DnaA TERM 2518 3160368 - 3160400 + H 95 -13.3 -4.28548 | opp_overlap 3160351 3160370, overlap 3160369 ACGGAGGCACCCGGA AAGCGGGTGGCACGC AGG GCGTGCAACCCGCGA TTTTAGTGCGTCGAT TERM 2519 3160369 - 3160399 + H 86 -16.8 -3.16647 | opp_overlap 3160351 3160370, overlap 3160368 CGGAGGCACCCGGAA AGCGGGTGGCACGC AGG GCGTGCAACCCGCG ATTTTAGTGCGTCGA TERM 2520 3160398 - 3160370 - H 100 -20.3 -3.57792 | opp_overlap 3160369 3160368, overlap 3160351 GGAGGCACCCGGAAA GCGGGTGGCACGC AGG GCGTGCAACCCGC GATTTTAGTGCGTCG TERM 2521 3160466 - 3160427 - H 74 -14.9 -2.62616 | gap 1 CGATGGCCCAGACGA CCCGAGC-CCGGGCCGCG TGCGG CGCAGCCCGCCGCGCGGG GGCATTCGCGACCCG TERM 2522 3160620 - 3160591 - g 87 -14.9 -3.86897 | overlap 3160593 CCCATCTCCTACAAA GACGCCGGCGTCG ACAT CGACGCGGGCGAC GCGCTGGTCGAGCGC TERM 2523 3160618 - 3160593 - g 86 -16.1 -3.5241 | overlap 3160591 CATCTCCTACAAAGA CGCCGGCGTCG ACAT CGACGCGGGCG ACGCGCTGGTCGAGC Ajs_2994 3160552 - 3161601 + | phosphoribosylformylglycinamidine cyclo-ligase Ajs_2995 3161620 - 3162699 + | hypothetical protein TERM 2524 3162735 - 3162755 + F 74 -4.6 -4.59773 | opp_overlap 3162722 3162720, overlap 3162722 3162721 TAGCTGCTAGCGCTT GTCCAGCA AGCGC TGCAGGGC TTTTTCACCCTCAAA Ajs_2996 3162923 - 3163315 + | UspA domain-containing protein TERM 2525 3163351 - 3163317 - T 70 -9.9 -3.54459 | gap 1, overlap 3163321 TCAAGGCCGCTTAAA GGCACGTCCGAGCGCC CCAA GGCGCTCGG-CTCCCC CCGGCCTCCGCTTGC Ajs_2997 3164319 - 3163405 - | hypothetical protein TERM 2526 3164378 - 3164397 + r 74 -2.1 -4.85599 | GTGTCCAGCACATGA CATGGTG CGCTTT TGCCATG TTTTTGTCACATGGC Ajs_2998 3165275 - 3164427 - | hypothetical protein Ajs_2999 3166887 - 3165289 - | integral membrane protein MviN TERM 2527 3167220 - 3167198 - g 70 -8.4 -4.02817 | overlap 3167215 CTTCCACAAGAACAA GGCAGCTC GCGACAA GAGCCGCC TGTCCGCCAAGGTGA Ajs_3000 3166959 - 3167261 + | SSU ribosomal protein S20P TERM 2528 3167363 - 3167350 - T 79 -9.5 -4.18119 | opp_overlap 3167350 AGCAAAGCAGAGAAA CCGCC TCCG GGCGG TTTTTTTGTGCCCGG TERM 2529 3167350 - 3167363 + T 100 -9.5 -5.60993 | opp_overlap 3167350 AGCAAAGCAGAGAAA CCGCC TCCG GGCGG TTTTTTTGTGCCCGG TERM 2530 3167446 - 3167429 - T 93 -8.4 -5.10933 | CCACCCAAAAGAAAA GGCCTG TGTTGT CAGGCC TTGGGATCGGGGAGC Ajs_3001 3167754 - 3167440 - | hypothetical protein TERM 2531 3168247 - 3168237 - g 75 -6.8 -4.34402 | GCCGGGACAGGAAAA GCTG GCC CAGC TGCTGACCGAGCGCG Ajs_3002 3167989 - 3169185 + | acetylornithine aminotransferase Ajs_3003 3169202 - 3170119 + | ornithine carbamoyltransferase Ajs_3004 3170457 - 3170801 + | hypothetical protein Ajs_3005 3171129 - 3170932 - | hypothetical protein TERM 2532 3173668 - 3173656 - g 86 -9.1 -4.63932 | opp_overlap 3173656 CATCCGCCAAGAAAA GCTGG AGA CCAGC CAGCTTGCTGTGGAT TERM 2533 3173991 - 3174004 + G 70 -2.3 -4.67353 | overlap 3173992 3174002 TGCAATTGGGGCGGT TGCTG CGTA CGGCG TTTTTGGCTGACTAC Ajs_3007 3171485 - 3174400 + | transposase Tn3 family protein Ajs_3008 3174876 - 3174517 - | putative transposase Ajs_3009 3175786 - 3174983 - | phosphotransferase domain-containing protein TERM 2534 3175724 - 3175734 + g 77 -5.4 -4.58663 | AGCCATTTCCAGCGC CACT TCC AGTG TTTTTGCGCCGTCGT Ajs_3010 3176927 - 3175779 - | hypothetical protein TERM 2535 3176017 - 3176029 + g 75 -3.3 -4.84359 | opp_overlap 3176016 GCGCAGCGCAGAACC CAGGT CAG ACCGG TTTTTGTACGCATGC TERM 2536 3176106 - 3176096 - G 72 -5.4 -4.30576 | CGTCTAGCAGTAAAA GAGT CTG ACTC ACCATAGGCTGGGGT Ajs_3011 3177793 - 3176984 - | hypothetical protein Ajs_3012 3180915 - 3178522 - | lipopolysaccharide biosynthesis Ajs_3013 3181778 - 3180966 - | polysaccharide export protein TERM 2537 3181113 - 3181126 + g 74 -2.3 -4.75372 | overlap 3181114 AAGCGGATCAGGTGC CTCGC CCTG GCGAA TTTTTAGTACATCGT TERM 2538 3181670 - 3181705 + g 76 -14.6 -3.14132 | TCGAAGCATTGGTTG ACGGCGTGCTGGCCTG CGCC CAGGCCGCCGCGCCGC TTAGTGCCAGGCAGA TERM 2539 3182015 - 3182004 - H 75 -3 -4.87786 | opp_overlap 3182014, overlap 3182014 GGAAGTCGATAAAAA GATT AAAT AATC CAACCAAATGGATTT TERM 2540 3182089 - 3182074 - g 79 -4.6 -4.79955 | ATATTGACAATAAAA CCATCG CTAT CGTTGG TCTCGGTTATGTGGG TERM 2541 3182697 - 3182687 - g 72 -6.8 -4.19704 | GAAGGTGATTGAAAA CACG CAG CGTG ATCTGAACATCGCCT TERM 2542 3183073 - 3183032 - g 82 -4.5 -4.87803 | gap 2, opp_overlap 3183058, overlap 3183033 3183034 3183058 TACCTTCAAAGAAAA CTGCCCCGACATCCGCAAC AGCAAA GTTGCGGACAT-GGTGC-G CGAATTTCAGGCCTG Ajs_3014 3182055 - 3183350 + | UDP-glucose/GDP-mannose dehydrogenase Ajs_3015 3183384 - 3184367 + | oxidoreductase domain-containing protein TERM 2543 3184837 - 3184820 - g 85 -5.5 -5.00884 | ACCTTGGTGAAAAAA GGCGC GACCCTGG GCGCC AACTGCACTATCGTC Ajs_3016 3184436 - 3185083 + | putative acetyltransferase Ajs_3017 3185087 - 3185356 + | hypothetical protein TERM 2544 3185972 - 3185950 - g 79 -3.4 -5.06414 | gap 1, overlap 3185951 GCGCTGGAAGAAAAA CTGTGCGCC TACACC GGCGC-CAA ACACTGCATCACCGT Ajs_3018 3185353 - 3186909 + | DegT/DnrJ/EryC1/StrS aminotransferase Ajs_3019 3186923 - 3187120 + | putative transcriptional regulator TERM 2545 3187427 - 3187406 - g 72 -7.3 -4.30034 | gap 1, opp_overlap 3187420 AAAACGGCATCAAAA GCTACGACGC ACT GCA-CGTAGC CAGCGCCATCGCTGG Ajs_3020 3187117 - 3187566 + | hypothetical protein Ajs_3021 3187556 - 3187768 + | hypothetical protein Ajs_3022 3188053 - 3189453 + | polysaccharide biosynthesis protein Ajs_3023 3189463 - 3190620 + | glycosyl transferase, group 1 TERM 2546 3190656 - 3190642 - g 75 -4.3 -4.69549 | overlap 3190654 AATGTAAAATTAAAA TGCTT AATAA AAGCA CAGTTTATGCAGTGT TERM 2547 3190666 - 3190654 - g 73 -4.1 -4.6635 | overlap 3190642 AAATGCTTAATAAAA GCACA GTT TATGC AGTGTTGGTTGCACT TERM 2548 3190784 - 3190794 + G 79 -2.4 -5.05782 | GATATTATTCCTTGG CCTG ACT CTGG TTTTTTGGGGTAAGT TERM 2549 3191396 - 3191412 + G 75 -2.9 -4.82855 | overlap 3191400 GTTTTATCAAATTGC CATATCC TTT GGGGATG TTTTTGGCTTTGATA TERM 2550 3191682 - 3191672 - g 95 -5.4 -5.46657 | TATTGCAATAAAAAA TCTG AGG CAGA AAAGATCTTTTGGTT Ajs_3024 3190614 - 3191858 + | hypothetical protein Ajs_3025 3191845 - 3193014 + | glycosyl transferase, group 1 Ajs_3026 3193004 - 3194056 + | polysaccharide biosynthesis protein CapD TERM 2551 3194108 - 3194123 + F 80 -4.6 -4.82901 | TCGCGGCGAGGGCGC CGCTCC TACG GGGGTG TTTTTGTAGGAGGCC Ajs_3027 3194323 - 3194538 + | hypothetical protein Ajs_3028 3194542 - 3194970 + | PilT domain-containing protein Ajs_3029 3195058 - 3196209 + | NAD-dependent epimerase/dehydratase Ajs_3030 3196206 - 3197426 + | SMC domain-containing protein TERM 2552 3197532 - 3197522 - g 89 -5.4 -5.17576 | GAGCAAGGCAAAAAA GTCA AGC TGAC TCCCAAATCGGGAGA Ajs_3031 3197423 - 3197920 + | hypothetical protein TERM 2553 3197971 - 3197944 - g 70 -3.5 -4.5366 | gap 2 TGAAAAAACTCAAAA TCATGACCGTGGT GGGT ACC-CGGCC-TGA AATCATTCGCCTCTC TERM 2554 3198351 - 3198326 - g 73 -11.1 -3.68738 | GCCTGAAGAAATCAA CCGCCGCATAG TGGA CCACACGGCGG ACATCAACCTGACCT Ajs_3032 3197928 - 3199070 + | UDP-N-acetylglucosamine 2-epimerase Ajs_3033 3199090 - 3200322 + | glycosyl transferase, group 1 TERM 2555 3200592 - 3200647 + G 75 -4.5 -4.65895 | gap 2, overlap 3200611 3200623 GCATGACCAGCGAGC GCGGCCCGGATGGCGAGCTGCTGCCCG ACGC CGTGCGCCTGG-CGCCGTTT-GGCCGC TTTTTGCGTGCCACC Ajs_3034 3200408 - 3201001 + | undecaprenyl-phosphate galactose phosphotransferase TERM 2556 3201252 - 3201273 + G 85 -5.1 -5.0538 | gap 1 AAAGTTGGTGCAGCG CTGCGAGGCC GAT GGCGT-GCAG TTTTTTGAGCTGCGC Ajs_3035 3200998 - 3201663 + | putative acetyl transferase protein Ajs_3036 3201678 - 3202088 + | VanZ family protein Ajs_3037 3202109 - 3203335 + | DegT/DnrJ/EryC1/StrS aminotransferase TERM 2557 3203947 - 3203958 + T 84 -2.2 -5.29782 | ACCATCGGGGTGATT CAGC CGCT GTTG TTTTTTGTGGGTGTG TERM 2558 3203974 - 3203996 + T 87 -5.5 -5.24129 | overlap 3203975 TTTTTTGTGGGTGTG GGCACCAGC CGGGT GTTGGTGCG TTTTTTCTCGGCGAC TERM 2559 3203975 - 3203995 + T 71 -9 -3.73995 | overlap 3203974 TTTTTGTGGGTGTGG GCACCAGC CGGGT GTTGGTGC GTTTTTTCTCGGCGA Ajs_3039 3206673 - 3205648 - | putative binding-protein-dependent transport system protein TERM 2560 3206468 - 3206449 - G 79 -4.3 -4.80167 | overlap 3206452 3206454 3206466 TACCAAAAAGTAAAA CCATACT GGCACA AGCATGG CCAGAAAATCTGCCA TERM 2561 3206687 - 3206667 - G 93 -6.9 -5.1356 | GGGCAGCAACAAAAA CAGCCAT CACTGGT ATGGCTG ACCATAGTGCAGTCC TERM 2562 3207095 - 3207120 + H 100 -16.3 -4.08216 | opp_overlap 3207095 GCAACACATAAAAAA GCCAACCAATG AACC CATTGGTTGGC TTTTCGCGAACCTAA TERM 2563 3207120 - 3207095 - H 100 -16.3 -5.47431 | opp_overlap 3207095 GCAACACATAAAAAA GCCAACCAATG AACC CATTGGTTGGC TTTTCGCGAACCTAA Ajs_3040 3207347 - 3207658 + | hypothetical protein Ajs_3041 3208048 - 3207833 - | hypothetical protein Ajs_3042 3208745 - 3208143 - | hypothetical protein TERM 2564 3208678 - 3208695 + g 74 -2.6 -4.77438 | overlap 3208680 TGCATGGGTTGCACG CAGCCG ATAAAG CGGCTC TTTTTGATGATGAGT TERM 2565 3209254 - 3209297 + G 78 -14.4 -3.53091 | CGACGACGCCTACAC CCCCGGCGACGTGGGCGG CAAGCGCC CCGACCGCGCCGCCGTGG TTTACAGCCAGCGCT TERM 2566 3209755 - 3209744 - g 70 -2.2 -4.62069 | GCTGCAGGCCAAAAA GGCT TGCA AACC GTGCAGATCGTGCCC TERM 2567 3210054 - 3210066 + G 72 -6.9 -4.1899 | CGTATGCGCGCAACC CGGGG TCT CCTCG TTTTCAGTGCAATAA Ajs_3043 3208859 - 3210085 + | radical SAM domain-containing protein TERM 2568 3212383 - 3212371 - g 86 -9.1 -4.63932 | opp_overlap 3212371 CATCCGCCAAGAAAA GCTGG AGA CCAGC CAGCTTGCTGTGGAT TERM 2569 3212706 - 3212719 + G 70 -2.3 -4.67353 | overlap 3212707 3212717 TGCAATTGGGGCGGT TGCTG CGTA CGGCG TTTTTGGCTGACTAC Ajs_3044 3210200 - 3213115 + | transposase Tn3 family protein TERM 2570 3213260 - 3213247 - g 70 -5.9 -4.1899 | opp_overlap 3213247 TTATTGCACTGAAAA CGAGG AGAC CCCCG TTTCGACGTTCTTGC Ajs_3045 3213209 - 3213571 + | hypothetical protein TERM 2571 3213842 - 3213824 - T 74 -4.6 -4.56597 | opp_overlap 3213817 3213824 TTGCTGTGGGAAAAA TTTCCTTT ACA AACGGAAA TGCTTTTTTAGTCAC Ajs_3046 3215617 - 3214481 - | LuxR family transcriptional regulator TERM 2572 3214535 - 3214510 - G 89 -11.1 -4.28361 | GCAACGCCATCAAAA CGCGCACCAGA TCGG TCTGGCGCTCG ACCTCGGTCTTGGCC TERM 2573 3215519 - 3215540 + g 78 -6.5 -4.65895 | gap 1, opp_overlap 3215506 3215518 3215516 3215521, overlap 3215519 3215520 CACCTGCACGAAGAG C-AGGCCGAG CAA CTCGGCCACG TTTTTCAATGCAACC TERM 2574 3216187 - 3216177 - R 73 -3.2 -4.72272 | GTTTTTCACCAAAAA CGAA GTG CTCG CATTTAAAATTGGAT Ajs_3048 3217524 - 3216346 - | YeeC-like protein TERM 2575 3216628 - 3216638 + g 70 -8.2 -3.99898 | overlap 3216627 GTCTTTGCTTGCTGA CGCG ATG CGCG TTTCTACCTTGCTTC Ajs_3050 3218129 - 3219667 + | integrase catalytic subunit TERM 2576 3219650 - 3219679 + T 75 -3.6 -4.82901 | GAATACCGGGTGAGC CTTGGACTTG CGGCATAAAA CCAGTCCAAG TTTTTATCCGCACCC Ajs_3051 3220658 - 3219858 - | IstB ATP binding domain-containing protein TERM 2577 3220315 - 3220330 + g 79 -6.8 -4.62069 | CCTGCCACGCCGATG GCCGTC GCAA GATGGC TTTTTCCGGTGCCGG Ajs_3052 3222165 - 3220651 - | integrase catalytic subunit TERM 2578 3221700 - 3221686 - G 71 -9.2 -3.8591 | overlap 3221687 CGCCACAAGGAAGAA CGCGCG GCT CGCGCA CAGTTTCATGTGCGC Ajs_3054 3222991 - 3222494 - | protein tyrosine phosphatase Ajs_3055 3223335 - 3223015 - | ArsR family transcriptional regulator Ajs_3056 3224377 - 3223430 - | lipid A biosynthesis acyltransferase TERM 2579 3224392 - 3224412 + r 72 -7.6 -4.15044 | gap 1 CAGGAGTACCTTCGT GCTGCGCAC TGCG GTGCG-AGC TTTCTTGGGGCGGCC Ajs_3057 3226154 - 3224439 - | ABC transporter related TERM 2580 3224711 - 3224667 - G 73 -14.2 -3.14132 | gap 1 GGGCTTGTGCACCAA CGCCCGCGCGATGGCCAGGCG TTGG CGC-TGGCCGCCGGACAGGCG CGATCCGCCCTCGCC TERM 2581 3225377 - 3225435 + g 73 -13 -3.29471 | gap 1 CGAGCAGCGGGTCCT GCAG-CGCGCTGAGCGCTTCGCGGCTG ACCACC TGGCGGCGCAGCGCGCGGCGCAACTGC TTCATCTGGTCCGAC Ajs_3058 3227191 - 3226208 - | diacylglycerol kinase, catalytic region Ajs_3059 3228342 - 3227227 - | fatty acid desaturase Ajs_3060 3229213 - 3228440 - | hypothetical protein Ajs_3061 3230176 - 3229244 - | hypothetical protein TERM 2582 3230247 - 3230190 - R 75 -11.8 -3.57263 | gap 2, overlap 3230194 ACGTCGAGGCCGAAA GCCA-GGAGC-GCAGCGGGCCGCGGCGG CGCG CCACGGCGGCCTGCAGCAGCCGCACGGC ATGCACGGCCAGGCA Ajs_3062 3231330 - 3230173 - | hypothetical protein Ajs_3063 3231413 - 3232336 + | metallophosphoesterase Ajs_3064 3232323 - 3232814 + | histidine triad (HIT) protein Ajs_3065 3232834 - 3234024 + | permease YjgP/YjgQ family protein Ajs_3066 3234021 - 3235088 + | permease YjgP/YjgQ family protein TERM 2583 3236084 - 3236116 + G 72 -13.4 -3.14132 | gap 1 GGCTTCGCGCTGCAC GCGGCG-ACCCGGCT GGAC GGCCGGGTGCGCAGC TTCATCGCCCGCCGC TERM 2584 3236174 - 3236188 + G 73 -12.8 -3.37796 | GCGCTGCTGATCGGC GCCGGC CCG GCCGGC TTGTACCTCGTCACC Ajs_3067 3235085 - 3236293 + | putative phosphatidyltransferase Ajs_3068 3236300 - 3237427 + | hypothetical protein Ajs_3069 3237429 - 3238235 + | hypothetical protein Ajs_3070 3239012 - 3238221 - | nucleotidyl transferase Ajs_3071 3239732 - 3239076 - | 4'-phosphopantetheinyl transferase Ajs_3072 3239796 - 3241109 + | cytochrome P450 TERM 2585 3242300 - 3242321 + G 77 -15.9 -3.05844 | ACGCCGGCACCGGCT TGGCCGACC GGAC GGTCGGCCA TGTTCAGATCCGGGG Ajs_3073 3241129 - 3243090 + | AMP-dependent synthetase and ligase TERM 2586 3245095 - 3245061 - g 95 -20 -2.70932 | CGGCTTCGTCAAGGA CGATGCGCGCGTGCAG ACC CAGCACGCGAGCATCG GCCGCGACATTGCCC Ajs_3074 3243316 - 3245127 + | AMP-dependent synthetase and ligase Ajs_3075 3245147 - 3245395 + | acyl carrier protein Ajs_3076 3245392 - 3246573 + | serine palmitoyltransferase Ajs_3077 3247498 - 3246578 - | hypothetical protein Ajs_3078 3247671 - 3248555 + | hypothetical protein Ajs_3079 3249660 - 3248581 - | nucleoside-diphosphate-sugar epimerase-like protein Ajs_3080 3250646 - 3249660 - | NAD-dependent epimerase/dehydratase TERM 2587 3250373 - 3250357 - G 79 -7.9 -4.44046 | opp_overlap 3250357 3250356, overlap 3250358 TTCACCGCAAAGAAA TCGGCAC GCC GTGCCGC CTTGATGAGTCCGGC Ajs_3081 3250745 - 3251047 + | hypothetical protein Ajs_3082 3251578 - 3251066 - | CMP/dCMP deaminase, zinc-binding Ajs_3083 3251971 - 3251642 - | hypothetical protein TERM 2588 3253916 - 3253904 - R 91 -9.1 -4.63932 | opp_overlap 3253904 CATCCGCCAAGAAAA GCTGG AGA CCAGC CAGCTTGCTGTGGAT Ajs_3085 3255760 - 3254996 - | IstB ATP binding domain-containing protein Ajs_3086 3257352 - 3255757 - | integrase catalytic subunit TERM 2589 3256022 - 3256004 - G 70 -11.7 -3.48276 | GCGGCGTTGACACAA TGCGCCG GATAT CGGCGCA CCAGGCCGACGATGC TERM 2590 3257061 - 3257023 - G 72 -11.6 -3.53444 | GTACTGGCCGGCAAA GCCGTGGACATCGACCAG GTC CTGGTAGATGGCCGTGGC GTTGCGCTTGAGACG TERM 2591 3258464 - 3258505 + G 70 -11.3 -3.62096 | ATTCTGGCCCTGAAT GCCGCCGTCGAGGCCGCCC GAGC GGGCGAACACGGTCGCGGC TTTGCCGTGGTGGCC TERM 2592 3258639 - 3258591 - g 71 -13.7 -2.93723 | overlap 3258574 3258576 3258586 CCCTGATCAACGACA GCGTGGGCCGGGTCGAGCAAGGC AGC GCCTTGGTGGACCAGGCCGGCAC CACTATGAGAGAGGT Ajs_3087 3257465 - 3259048 + | methyl-accepting chemotaxis sensory transducer Ajs_3088 3259920 - 3259015 - | LysR family transcriptional regulator Ajs_3089 3260037 - 3261023 + | oxidoreductase FAD-binding subunit Ajs_3090 3261069 - 3261629 + | Rieske (2Fe-2S) domain-containing protein Ajs_3091 3261670 - 3261984 + | Rieske (2Fe-2S) domain-containing protein TERM 2593 3262280 - 3262294 + G 100 -11.4 -4.77986 | opp_overlap 3262256 3262279 TCCCGCCAGAACGAT GGCTCG GTG CGAGCC TTTTTGAATGTTTGC TERM 2594 3262924 - 3262904 - g 79 -3.2 -4.98616 | overlap 3262905 GCAAAACAGGAAAAA CTCGCCAA GGAAA TCGGCGAT GTCCGGGCACGGATT Ajs_3092 3262073 - 3263416 + | ring hydroxylating dioxygenase, alpha subunit Ajs_3093 3263431 - 3264015 + | aromatic-ring-hydroxylating dioxygenase, beta subunit Ajs_3096 3266698 - 3265718 - | transposase, IS4 family protein TERM 2595 3267149 - 3267201 + r 91 -16.1 -3.59979 | opp_overlap 3267150 3267151, overlap 3267150 TTGGCGTGTTGTTAA ATGCGATGGGCAAGCCGCGCAGGGC GTA GCCCGTAGCGGCTTGCCCATCACCG TTTCCGATCAGAAGG TERM 2596 3267200 - 3267150 - R 100 -21.8 -3.53012 | opp_overlap 3267149 3267150, overlap 3267151 TGGCGTGTTGTTAAA TGCGATGGGCAAGCCGCGCAGGGC GTA GCCCGTAGCGGCTTGCCCATCACC GTTTCCGATCAGAAG TERM 2597 3267150 - 3267200 + r 90 -19.6 -2.75844 | opp_overlap 3267150 3267151, overlap 3267149 TGGCGTGTTGTTAAA TGCGATGGGCAAGCCGCGCAGGGC GTA GCCCGTAGCGGCTTGCCCATCACC GTTTCCGATCAGAAG TERM 2598 3267199 - 3267151 - R 100 -25.3 -2.71712 | opp_overlap 3267150 3267149, overlap 3267150 GGCGTGTTGTTAAAT GCGATGGGCAAGCCGCGCAGGGC GTA GCCCGTAGCGGCTTGCCCATCAC CGTTTCCGATCAGAA Ajs_3098 3268030 - 3267209 - | IstB ATP binding domain-containing protein Ajs_3099 3269552 - 3268020 - | integrase catalytic subunit Ajs_3100 3269980 - 3269636 - | inner-membrane translocator Ajs_3101 3271568 - 3269967 - | ABC transporter related TERM 2599 3270398 - 3270378 - G 70 -11.1 -3.59979 | CGCCTTGACCTGAAA GCGCGCG ATGATGG CGCGCGC CTGCGCCTGCAGTTG TERM 2600 3270621 - 3270656 + g 70 -8.8 -3.89614 | overlap 3270623 CATGGCGGGCGCGGC GCGCTGGTCCTCGCCC GACA GGGCGTAGAGCAGCTC TTTCTGCCCATTGCC TERM 2601 3272326 - 3272365 + G 77 -7.8 -4.3277 | gap 1, opp_overlap 3272325 3272326, overlap 3272329 CATTGCTACAGCAAT TGGAGCTACTCGCGCTTGC CCC GCAAGCGCTAGAGGC-CGA TTTCTCTTATATCTC Ajs_3102 3271749 - 3273272 + | molybdopterin dehydrogenase, FAD-binding TERM 2602 3274044 - 3274063 + G 70 -10.6 -3.53012 | CGGTGCGCGTGGAGT GCCGGCGC ATGG GCGGCGGC TTTGGCGGCAAGGAA Ajs_3103 3273269 - 3275674 + | aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding Ajs_3104 3277812 - 3275710 - | diguanylate cyclase with PAS/PAC sensor TERM 2603 3276892 - 3276837 - G 82 -17.5 -3.04144 | gap 2, opp_overlap 3276837 CGCCCAGCGCCAACA GGGCCACCAGCGCCGTGACCGCGGCCG CGAG CGCCCA-GGCC-CGGCGCTGGACGCCC TGCATTGGCGCCAGC TERM 2604 3278036 - 3278019 - R 93 -14.1 -4.19704 | CAACTGGATGCAAAA GGGCCGC CGCA GCGGCCC CATCGGGCGGAGTGC Ajs_3105 3278686 - 3278063 - | Crp/FNR family transcriptional regulator TERM 2605 3279993 - 3280017 + H 100 -22.9 -5.78622 | GTCGGCCACTGCACG GCACGCGGCGC ATG GCGCCGCGTGC TTTTTTTTCGCCTGC Ajs_3107 3280187 - 3282019 + | diguanylate cyclase/phosphodiesterase Ajs_3108 3282178 - 3282609 + | histidine triad (HIT) protein Ajs_3109 3283606 - 3282617 - | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding TERM 2606 3283585 - 3283598 + g 74 -2.3 -4.75372 | overlap 3283582 TCGAAGCTGAATGCG CGCAG TGGA CTACG TTTTTCATAGCTGCT Ajs_3110 3283751 - 3285007 + | Bcr/CflA subfamily drug resistance transporter Ajs_3111 3284997 - 3285968 + | tRNA delta(2)-isopentenylpyrophosphate transferase Ajs_3112 3285965 - 3286642 + | ABC transporter related Ajs_3113 3287067 - 3286639 - | heat shock protein Hsp20 Ajs_3114 3287205 - 3289838 + | hypothetical protein Ajs_3115 3289848 - 3290939 + | pyridoxal-5'-phosphate-dependent enzyme, beta subunit Ajs_3116 3290939 - 3292081 + | secreted hydrolase-like protein TERM 2607 3292231 - 3292198 - T 100 -14.5 -4.91852 | overlap 3292199 GCTATCAAAAACAAA GCGGCCATGCAGGGC GGTT GCCGCGCATGGCCGA GGGTGCCGCCGGCCT TERM 2608 3292230 - 3292199 - T 100 -18 -3.54027 | overlap 3292198 CTATCAAAAACAAAG CGGCCATGCAGGGC GGTT GCCGCGCATGGCCG AGGGTGCCGCCGGCC Ajs_3117 3293284 - 3292283 - | inner-membrane translocator Ajs_3118 3294186 - 3293302 - | inner-membrane translocator Ajs_3119 3295419 - 3294223 - | extracellular ligand-binding receptor TERM 2609 3295458 - 3295502 + r 87 -19.4 -2.52464 | gap 2 GCTTTGGTTTGCAAC GTCGACGCGCGCGGTCCCGGGC AGT GCCCGGGACCGTG-GC-TCAAC TCACTTCCACAGGGC Ajs_3120 3296705 - 3295503 - | putative substrate-binding periplasmic (pbp) ABC transporter protein Ajs_3121 3297464 - 3296751 - | ABC transporter related TERM 2610 3297146 - 3297162 + g 73 -3.5 -4.63218 | overlap 3297122 TGCCGGTCTTGAGCA CCGGCGG CAG CAGCAGG TTTTCTTCACACGAC TERM 2611 3297209 - 3297191 - G 73 -5.9 -4.38154 | overlap 3297193 ACAGGCTGGAGAAAA TGCCGCG CTCTT CGGGGCA GTAGCCCACACCCAG Ajs_3122 3298236 - 3297466 - | ABC transporter related Ajs_3123 3299248 - 3298409 - | ModE family transcriptional regulator Ajs_3124 3299273 - 3300028 + | molybdenum ABC transporter, periplasmic molybdate-binding protein TERM 2612 3300472 - 3300520 + G 70 -10.2 -3.63694 | CGAAGCGCTGGGCCG CCGG-CCGCTGGAGGTGGCGGCCA CGC TGGGCGCCAGC-CCGCTGGACCGG TTCTTCACCGTCGCT TERM 2613 3300581 - 3300601 + G 75 -11.9 -3.62572 | GCAGCGATCCTGAGC TTTGCCCAC ACG GTGGGCGAA TTTGGCGTGGTGCTC Ajs_3125 3300104 - 3300787 + | molybdate ABC transporter, inner membrane subunit Ajs_3126 3300784 - 3301878 + | molybdate ABC transporter, ATPase subunit TERM 2614 3301973 - 3302008 + T 72 -4 -4.53398 | gap 1, overlap 3301975 TTGATTGGTCAAAAG TGGCTG-CAGCGCTTGT GGG ATGAGCGCGGGTAGCTA TTGTTTTTGATGTTG Ajs_3127 3303029 - 3302205 - | extracellular solute-binding protein Ajs_3128 3303802 - 3303026 - | ABC transporter related Ajs_3129 3304536 - 3303799 - | binding-protein-dependent transport systems inner membrane component TERM 2615 3304261 - 3304246 - G 85 -6.1 -4.86731 | overlap 3304248 3304249 CGCCTTGAAAGAAAA CAGCC AGCCCA GGCTG CCCAGCGGGCCGGTG TERM 2616 3304866 - 3304910 + G 78 -14.1 -3.61103 | CAGGCACAGGCGCGG CTCGCGCCGCAGATCGAGGCG CTG CGCGCCGATCTGGAGCGCGCG TTTGCCGTGGCGTTC Ajs_3130 3304587 - 3305708 + | molybdate metabolism transcriptional regulator Ajs_3131 3307724 - 3305745 - | TRAP C4-dicarboxylate transport system permease DctM subunit TERM 2617 3306459 - 3306441 - G 70 -10.2 -3.70033 | CAGGAACAGATAGAA GAGCGCGG TGG CCGCACCC AGCACGCCAAACATG Ajs_3132 3308341 - 3307721 - | tripartite ATP-independent periplasmic transporter DctQ TERM 2618 3308462 - 3308442 - R 100 -18.3 -3.9941 | CTCGTCAGAATGAAA GGCAGGCCC GCC GGGCCTGCC GCGGCATCAGCTCTT Ajs_3133 3309584 - 3308469 - | TRAP dicarboxylate transporter- DctP subunit TERM 2619 3309691 - 3309705 + H 78 -7 -4.58395 | opp_overlap 3309652 3309649, overlap 3309692 ATCGCGCACCCCACC ACGGCG TTC CGCCGC TTTTTGCGCAGTGCA Ajs_3134 3310017 - 3311069 + | delta1-piperideine 2-carboxylate reductase Ajs_3135 3312411 - 3311164 - | Bcr/CflA subfamily drug resistance transporter Ajs_3136 3314108 - 3312471 - | AMP-dependent synthetase and ligase Ajs_3137 3314198 - 3316159 + | DNA primase TERM 2620 3316378 - 3316406 + F 78 -2.9 -5.07523 | overlap 3316376 3316380 3316383 TGCCTTCGCCGTGCC TGCCCGCGCCGGG TTC CTTGGCGCTTGTG TTTTCTTTGTGTGTC TERM 2621 3316383 - 3316401 + F 81 -10.2 -4.14927 | overlap 3316376 3316380 3316378 TCGCCGTGCCTGCCC GCGCCGGG TTC CTTGGCGC TTGTGTTTTCTTTGT Ajs_3138 3316445 - 3318838 + | RpoD family RNA polymerase sigma factor TERM 2622 3318874 - 3318897 + F 100 -15.2 -5.45652 | ACCTCGCGCTGCCAA CGCCCCCGCC GCTC GGCCGGGGCG TTTTTTATTGCGCGT TERM 2623 3319367 - 3319319 - g 72 -13.1 -3.1355 | gap 1 TCCACCGACACCGAA GCAGCGGCGCGCCAGATG-CAG CCCTAC CTGGCACCGGGCGCGCTGGTGC TCACGCTGCAAAACG Ajs_3139 3319043 - 3320002 + | 2-dehydropantoate 2-reductase TERM 2624 3320038 - 3319998 - f 84 -3.9 -5.19212 | overlap 3320000 3320002 AGGACCATCAAAAAA CATAGCTGCCAGCGCTT GATAGGT AAGCGCTGGAGGCCAAA AACATCCTGAATCGC TERM 2625 3320036 - 3320000 - f 76 -8.7 -4.22314 | overlap 3319998 3320002 GACCATCAAAAAACA TAGCTGCCAGCGCTT GATAGGT AAGCGCTGGAGGCCA AAAACATCCTGAATC TERM 2626 3320034 - 3320002 - f 71 -9.1 -3.69447 | overlap 3320000 3319998 CCATCAAAAAACATA GCTGCCAGCGCTT GATAGGT AAGCGCTGGAGGC CAAAAACATCCTGAA Ajs_3140 3320167 - 3320625 + | putative protein-S-isoprenylcysteine methyltransferase-like protein Ajs_3141 3321671 - 3320670 - | hypothetical protein TERM 2627 3320885 - 3320840 - G 70 -13.1 -3.03159 | gap 1 TGAAGCCGTGGAACA GCCG-CGCCACGTCCGCCGGGG GCA CGCCGGCAGGCGCCACGGCGGC GATCCAGCCCTCCAG TERM 2628 3321779 - 3321746 - R 74 -14.5 -2.61912 | opp_overlap 3321726, overlap 3321745 CCACGCATGCACAAG GCCGTGGCCCGATTG ATAC CCCTCAGGCCACGGC TGCGCACGCGCGCAG Ajs_3142 3322976 - 3321768 - | L-carnitine dehydratase/bile acid-inducible protein F TERM 2629 3323032 - 3323002 - R 100 -11.1 -4.82333 | gap 1, overlap 3323004 AGAAGAAGCTAAAAA CAGGCG-AGCCCGC TCAG GCAGGCTGCGCCAG GGTGGAAACAGAAGC TERM 2630 3323030 - 3323004 - R 83 -12.3 -4.01369 | gap 1, overlap 3323002 AAGAAGCTAAAAACA GGCG-AGCCCGC TCAG GCAGGCTGCGCC AGGGTGGAAACAGAA Ajs_3143 3323986 - 3323015 - | hydroxymethylglutaryl-CoA lyase Ajs_3144 3324098 - 3325000 + | LysR family transcriptional regulator Ajs_3145 3325175 - 3325480 + | putative transcriptional regulator TERM 2631 3325512 - 3325526 + F 86 -8.5 -4.60746 | TTAGGCCCCCACCAG CCCGC CGTGT GCGGG TTTTGGTCTTTTTGG TERM 2632 3325539 - 3325575 + F 72 -7.3 -4.17608 | overlap 3325541 GGGTTTTGGTCTTTT TGGCCCCTAGCGCTTAT TGG ATAAGCGCTAACAGCTA TCTTTTTTGAATCAA Ajs_3146 3325609 - 3325968 + | peptidylprolyl isomerase TERM 2633 3325995 - 3326043 + T 100 -25.6 -2.87463 | opp_overlap 3325974 3326008, overlap 3326008 3326040 GCCCCGCTGGCGGGG CGCCCGAAAAAAAGGGAACGTG GTTCG CACGTTCCCTTTTTTGTGGGCG TGTATGGCCGCCGTT TERM 2634 3326030 - 3326008 - T 100 -13.5 -5.40072 | opp_overlap 3325995 3326008 GGCGCCCGAAAAAAA GGGAACGTG GTTCG CACGTTCCC TTTTTTGTGGGCGTG TERM 2635 3326008 - 3326030 + T 100 -13.5 -5.252 | opp_overlap 3326008, overlap 3325995 GGCGCCCGAAAAAAA GGGAACGTG GTTCG CACGTTCCC TTTTTTGTGGGCGTG Ajs_3147 3327452 - 3326061 - | MiaB-like tRNA modifying enzyme YliG Ajs_3148 3328049 - 3327480 - | polyhydroxyalkonate synthesis repressor, PhaR TERM 2636 3327975 - 3327985 + g 70 -2.4 -4.66609 | GTACTTCTTGATCAC GCGC TGG GCGG TTTTTGGGTCAGGTG TERM 2637 3328170 - 3328189 + r 83 -9.2 -4.39002 | opp_overlap 3328171, overlap 3328171 ATCCGGAAACAAAAA AGCCGCTC TGTC GAGCGGCG TTTTGTACAGAATTT TERM 2638 3328188 - 3328171 - R 100 -12.7 -5.63517 | opp_overlap 3328170 3328171 TCCGGAAACAAAAAA GCCGCTC TGTC GAGCGGC GTTTTGTACAGAATT TERM 2639 3328171 - 3328188 + r 73 -12.7 -3.22678 | opp_overlap 3328171, overlap 3328170 TCCGGAAACAAAAAA GCCGCTC TGTC GAGCGGC GTTTTGTACAGAATT TERM 2640 3328384 - 3328363 - R 84 -4.3 -5.20216 | overlap 3328352 3328364 TATAGCAGCAAAAAA TGCCGCC TCAGCCCT GGCGGCC ATCATCGCCGGCGCG Ajs_3149 3330629 - 3328386 - | (p)ppGpp synthetase I, SpoT/RelA Ajs_3150 3331561 - 3330626 - | alpha/beta hydrolase fold Ajs_3151 3331631 - 3332413 + | 3-hydroxybutyrate dehydrogenase Ajs_3152 3333206 - 3332493 - | hypothetical protein TERM 2641 3332949 - 3332999 + g 77 -10.9 -3.79481 | gap 1, overlap 3332951 3332951 GCGCACGTCCATCTG CTGCGGCTGGGCGGCGCGGCGGGC TTCG GCCAG-CGCGGCGTCCAGCGCCTG TTTGAGTTGCGTTTG TERM 2642 3332951 - 3332997 + g 73 -12.1 -3.47184 | gap 1, overlap 3332949 3332951 GCACGTCCATCTGCT GCGGCTGGGCGGCGCGGCGGGC TTCG GCCAG-CGCGGCGTCCAGCGCC TGTTTGAGTTGCGTT TERM 2643 3332951 - 3332996 + g 75 -15.4 -2.67588 | gap 2, overlap 3332951 3332949 GCACGTCCATCTGCT GCGGCTGGGCGGCGCGGCGGGC TTCG GCCAG-CGCGGCGTCCAG-CGC CTGTTTGAGTTGCGT ompR 3333427 - 3334158 + | osmolarity response regulator Ajs_3154 3334242 - 3335747 + | integral membrane sensor signal transduction histidine kinase Ajs_3155 3336326 - 3335823 - | 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase Ajs_3156 3337246 - 3336323 - | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase TERM 2644 3337375 - 3337365 - g 72 -8.2 -4.11216 | GGGCGAGCGTGAAAA GGCC GCA GGCC GCACCACCGCCATCG Ajs_3157 3337264 - 3340758 + | transcription-repair coupling factor TERM 2645 3341155 - 3341196 + G 72 -13 -3.20573 | overlap 3341153 TCGTGGGCGTGCTGC TGCG-GCGCCTGGCGGGCGC GCGT GCGCTCACC-GGCGTGCGCA TCTTCATCTACGTGC Ajs_3158 3340767 - 3341441 + | hypothetical protein Ajs_3159 3341483 - 3342199 + | phosphoserine phosphatase TERM 2646 3342350 - 3342333 - f 95 -2.7 -5.71295 | ATATAAAAATAAAAA CGACT TGCGGCTG AGTCG TCCCGCTTACACTTC Ajs_3160 3342435 - 3343220 + | YaeC family lipoprotein TERM 2647 3343222 - 3343267 + T 84 -13.9 -3.69327 | gap 1, opp_overlap 3343246 3343251, overlap 3343251 TCCCCGCGTTCTGAC CGC-GCAGCGGCAACGCTGTAC GAA GAAAAGCGCTGCCGCGGCAGCG CTTTTTTCATGGGTG TERM 2648 3343273 - 3343246 - T 73 -12.8 -3.15579 | opp_overlap 3343222 3343251, overlap 3343251 GCAACGCTGTACGAA GAAAAGCGCTGC CGCG GCAGCGCTTTTT TCATGGGTGCGGGCA TERM 2649 3343268 - 3343251 - T 100 -12.7 -4.71426 | opp_overlap 3343222 3343251, overlap 3343246 GCTGTACGAAGAAAA GCGCTGC CGCG GCAGCGC TTTTTTCATGGGTGC TERM 2650 3343251 - 3343268 + T 100 -12.7 -5.1675 | opp_overlap 3343246 3343251, overlap 3343222 GCTGTACGAAGAAAA GCGCTGC CGCG GCAGCGC TTTTTTCATGGGTGC Ajs_3161 3343953 - 3343294 - | lysine exporter protein LysE/YggA Ajs_3162 3343997 - 3344908 + | chromosome replication initiation inhibitor protein TERM 2651 3344939 - 3344920 - T 73 -2.8 -4.81083 | gap 1, opp_overlap 3344925, overlap 3344923 3344925 CTGAATCATCAAAAA GTAGAGCGC TTC GCGCT-TGC AGGTAAAGCGCTGGA Ajs_3163 3345463 - 3344963 - | BadM/Rrf2 family transcriptional regulator Ajs_3164 3345553 - 3346275 + | hypothetical protein Ajs_3165 3346647 - 3346282 - | hypothetical protein TERM 2652 3346395 - 3346363 - G 72 -4.8 -4.56597 | gap 1, overlap 3346371 3346372 GCCCTTGCGTAAAAA GCGTGAAAGCGGC CCGCGACT GCCGCTCAC-CGC CCTGGCGCAGCGCGC Ajs_3166 3347093 - 3346647 - | hypothetical protein Ajs_3167 3348176 - 3347112 - | aldo/keto reductase Ajs_3168 3348405 - 3348190 - | SlyX family protein Ajs_3169 3349655 - 3348411 - | GntR family transcriptional regulator Ajs_3170 3349718 - 3350368 + | endonuclease III / DNA-(apurinic or apyrimidinic site) lyase Ajs_3171 3351233 - 3350406 - | hypothetical protein TERM 2653 3351247 - 3351207 - G 74 -14.8 -3.04792 | gap 2, opp_overlap 3351242, overlap 3351209 CGACGACGGCCAAGA CACCGCGCACGGCAGCATGG CCA CCATG--GCCGCGCGCCGTG TCAGGGTCAGGGCTT Ajs_3172 3353071 - 3351254 - | hypothetical protein TERM 2654 3352456 - 3352439 - G 75 -4.8 -4.59109 | gap 1, opp_overlap 3352448 GACATCGCTGAAAAA GCTCGGC TCCAC GCCG-GC CGGTGCGTTGTCCTT Ajs_3173 3355965 - 3353152 - | tetratricopeptide TPR_4 TERM 2655 3356942 - 3356930 - R 73 -3.3 -4.72272 | overlap 3356932 GCTGGTGACGAAAAA CACGC GCT GCACG ATGCGGTTGAACATG TERM 2656 3357215 - 3357187 - R 79 -8.1 -4.26903 | CGCAGCGTACGAAAA CCCTGGATGACGA TGC CCGTGATCCAGCG GGACTTCTGCCGGAC TERM 2657 3359500 - 3359524 + r 76 -8 -4.30978 | gap 1, opp_overlap 3359500 ACCAGGGTTTCAATA GGTGGTAGAGA CGAT TCT-TACCACC TTTTCATCAATTGGC Ajs_3176 3360715 - 3359657 - | nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase TERM 2658 3360754 - 3360740 - R 91 -3.4 -5.42259 | CGATTGTCAAAAAAA GGTCCA GCG CGGCCC CGACTCACGGGGCGC Ajs_3177 3361582 - 3360821 - | cob(II)yrinic acid a,c-diamide reductase Ajs_3178 3363331 - 3361850 - | adenosylcobyric acid synthase (glutamine-hydrolysing) TERM 2659 3363309 - 3363323 + g 71 -9.2 -3.82262 | overlap 3363307 ATGACGCAGCGCGCC GGCCCG GGT CGGGTC TTGTTCATTGCGATT Ajs_3179 3364332 - 3363328 - | aminotransferase TERM 2660 3363550 - 3363577 + g 72 -13.4 -3.17075 | gap 1 AACGGCCCAGCCCAG GGCCGCGC-ACAG CGC CAGTTGCGCGGCC TTCCATTCGCGCAGG Ajs_3180 3365302 - 3364325 - | adenosylcobinamide-phosphate synthase TERM 2661 3364385 - 3364395 + g 75 -3.2 -4.7254 | opp_overlap 3364363 3364362, overlap 3364363 CGCAAGCACCACAAG CGCT AGC AGTG TTTTTGATGCCAAAT TERM 2662 3364445 - 3364410 - G 70 -11 -3.59979 | GTTTTTGATGCCAAA TGCACCGCACGCTGCG TGTC CGCGGCCTGGGGCGCA CGCCCGGGGGCGTTC TERM 2663 3365236 - 3365210 - G 73 -10.7 -3.75169 | CACGACGGGATGAAA GGCAGCGGGGG GCTCG CCCCAGCGGCC GTCGATGGCCAGCGC Ajs_3181 3365481 - 3366008 + | N-terminal methylation site TERM 2664 3366007 - 3365988 - f 71 -9.2 -3.73224 | GGAGCGGCCATCAAA CGGCAGGC AACC GCCTGCTG ACCCCATGTGAAGGC Ajs_3182 3366046 - 3366630 + | putative type-4 fimbrial pilin related signal peptide protein Ajs_3183 3366618 - 3367091 + | type IV pilus modification protein PilV Ajs_3184 3367122 - 3368210 + | transposase, IS4 family protein Ajs_3185 3368408 - 3368662 + | hypothetical protein TERM 2665 3369043 - 3369055 + G 71 -9.1 -3.86015 | overlap 3369017 GCTGGGACCCAGCCA CCGAC ACA GTCGG TTTCTACACGCCATC Ajs_3186 3368694 - 3369590 + | hypothetical protein Ajs_3187 3369594 - 3370364 + | hypothetical protein Ajs_3188 3370447 - 3373911 + | type 4 fimbrial biogenesis protein PilY1 Ajs_3189 3373997 - 3374485 + | fimbrial protein pilin TERM 2666 3374539 - 3374563 + G 100 -15 -5.28942 | opp_overlap 3374539 CCACACATCGACCAA GCGCTTGGGC TCGCT GCCCAGGCGC TTTTTCTTTCCAATC Ajs_3190 3374521 - 3375621 + | 5-amino-6-(5-phosphoribosylamino)uracil reductase / diaminohydroxyphosphoribosylaminopyrimidine deaminase Ajs_3191 3375744 - 3377474 + | phospholipase D/transphosphatidylase Ajs_3192 3378462 - 3377434 - | dihydrouridine synthase, DuS Ajs_3193 3379712 - 3378540 - | methyltransferase small TERM 2667 3379481 - 3379437 - G 81 -10.6 -4.08485 | gap 1, opp_overlap 3379437 3379456 GCGATGCAAATGAAA GGCGTGCGGGAACTCCGCCGC GGGC ACGGCGCTGTTCCGAC-CGCC TTTGCCGCTCTTGCG Ajs_3194 3380371 - 3379721 - | GCN5-related N-acetyltransferase Ajs_3195 3381890 - 3380400 - | aldehyde dehydrogenase Ajs_3196 3381952 - 3382356 + | glutathione-dependent formaldehyde-activating, GFA TERM 2668 3382494 - 3382444 - T 71 -11.1 -3.45768 | gap 2 TTCAATAGCAATCAA TGCACTTC-GCGCGGCACG-ACGTC GGT GACGTCCGTGCTGCGCTGCGGGGCA TGCGCCGTCGGGCCG Ajs_3197 3382745 - 3382440 - | hypothetical protein TERM 2669 3382707 - 3382679 - G 95 -3.8 -5.53991 | gap 1 GACTCAGGAAAAAAA GCGCACCCATGGC GACG ACCACGAGC-CGC AACGTCCACCGGATC TERM 2670 3382767 - 3382795 + r 93 -19.6 -3.09635 | opp_overlap 3382747 3382770 3382782 CCCCTTTCTGGCAGA TGAGGGCGCGGG AAAGG CCCGCGCCCTCG TTCAATGGTAGACCT TERM 2671 3382792 - 3382770 - R 86 -17.7 -2.62184 | opp_overlap 3382767, overlap 3382747 3382782 CTTTCTGGCAGATGA GGGCGCGGG AAAGG CCCGCGCCC TCGTTCAATGGTAGA Ajs_3198 3385413 - 3382810 - | ATPase TERM 2672 3384740 - 3384782 + g 72 -14 -3.01712 | AGCGTCTCGGGCACC TCGCCCTCGACGATGCGCTG GGC CAGCCCCTCGACGATGGCGG TCTTGCCCACGCCGG TERM 2673 3385110 - 3385090 - G 77 -4 -4.72986 | CAGCGCCAGCAAAAA CAGCTCAC TGGCG ATGAACTG GTCGCCGCGCTTGAT Ajs_3199 3385958 - 3385482 - | molybdopterin synthase subunit MoaE Ajs_3200 3386025 - 3386279 + | hypothetical protein TERM 2674 3386550 - 3386526 - f 76 -9.9 -3.84451 | opp_overlap 3386548, overlap 3386505 CCCGGCAAAGCCAAA GCGCTGATCCG CTC CAGACCCGCGC GGGCGCCGTCTCCGG TERM 2675 3386548 - 3386582 + F 100 -13.6 -5.03314 | gap 1, opp_overlap 3386526 3386505 TCCGCTCCAGACCCG CGCGGGCGCCGTCTC CGGCAA GAG-CGGCGCCTGTG TTTTTTCGCCGTGCC Ajs_3201 3386611 - 3386940 + | hypothetical protein Ajs_3202 3387210 - 3386947 - | molybdopterin synthase subunit MoaD TERM 2676 3386986 - 3386974 - G 77 -10.5 -3.9122 | opp_overlap 3386979, overlap 3386975 GACGGGCGGAAAGAA CGCCG CCT CGGCG CCTGCCGCCAGCGGC Ajs_3203 3388451 - 3387207 - | molybdenum cofactor synthesis domain-containing protein TERM 2677 3387369 - 3387341 - G 71 -12.3 -3.34398 | overlap 3387314 3387339 TTTGGTTGGGAAACA GCTCCAGCGTGCC ATC GGCGCACTGGCGC ACGCGCAGGAATTCA TERM 2678 3387918 - 3387899 - G 88 -7.8 -5.00616 | gap 1, overlap 3387901 CGCCCGTGGAAAAAA GCGCCACGC GGG GC-CGGCGC GCCACCTGCAGGGTG Ajs_3204 3388999 - 3388448 - | molybdopterin-guanine dinucleotide biosynthesis protein B Ajs_3205 3390509 - 3389079 - | threonine synthase TERM 2679 3389630 - 3389643 + g 70 -3.7 -4.45544 | overlap 3389633 CTGTGCGGAAGAACT CGTCG AGCA CGTCG TTTTCGTTGGTGGCA Ajs_3206 3391886 - 3390525 - | homoserine dehydrogenase TERM 2680 3391779 - 3391801 + g 85 -10.4 -4.29227 | opp_overlap 3391772 3391768, overlap 3391780 ACAAGCAATCTCGAT GCCGCGGCCG GCG CGGCGGCGGA TTTCTTCCTGGTTGC TERM 2681 3391780 - 3391800 + g 73 -13.9 -3.16813 | opp_overlap 3391772 3391768, overlap 3391779 CAAGCAATCTCGATG CCGCGGCCG GCG CGGCGGCGG ATTTCTTCCTGGTTG TERM 2682 3391935 - 3391909 - R 78 -2.9 -5.02074 | overlap 3391910 TTACCCGTCAAAAAA GGCCCCAGC GCCCTATTG ACTGGCGCC GGCAGCTATCAAAAA Ajs_3207 3393189 - 3391957 - | aminotransferase AlaT Ajs_3208 3393270 - 3393716 + | hypothetical protein Ajs_3209 3393882 - 3394370 + | alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen TERM 2683 3394456 - 3394491 + F 100 -12.6 -4.62872 | gap 1, opp_overlap 3394462, overlap 3394457 3394458 3394462 ACACGCTCCCCGCAA TC-CAAAGCCGCCTCGG TCT CCTAGGCGGCTTTGTGC TTTTTGAACGTTACT TERM 2684 3394457 - 3394490 + F 88 -16.1 -3.37 | gap 1, opp_overlap 3394462, overlap 3394456 3394458 3394462 CACGCTCCCCGCAAT C-CAAAGCCGCCTCGG TCT CCTAGGCGGCTTTGTG CTTTTTGAACGTTAC TERM 2685 3394458 - 3394488 + F 95 -19.8 -3.24823 | opp_overlap 3394462, overlap 3394457 3394456 3394462 ACGCTCCCCGCAATC CAAAGCCGCCTCGG TCT CCTAGGCGGCTTTG TGCTTTTTGAACGTT TERM 2686 3394462 - 3394484 + F 100 -14.8 -4.2687 | opp_overlap 3394462, overlap 3394458 3394457 3394456 TCCCCGCAATCCAAA GCCGCCTCGG TCT CCTAGGCGGC TTTGTGCTTTTTGAA TERM 2687 3394484 - 3394462 - f 88 -14.8 -3.75153 | opp_overlap 3394458 3394457 3394456 3394462 TCCCCGCAATCCAAA GCCGCCTCGG TCT CCTAGGCGGC TTTGTGCTTTTTGAA Ajs_3210 3394526 - 3396289 + | PhoH family protein Ajs_3211 3396289 - 3396654 + | hypothetical protein TERM 2688 3396680 - 3396715 + T 100 -14.2 -4.75308 | gap 1, opp_overlap 3396680 3396682, overlap 3396682 TCACTACTAAATAAA TAGCTACTAGCGCTTAC CCA GTAAGCGCTAG-AGCCA TTTTTGACTCTTAAT TERM 2689 3396715 - 3396680 - T 100 -16.4 -4.51743 | gap 1, opp_overlap 3396680 3396682, overlap 3396682 TCACTACTAAATAAA TAGCTACTAGCGCTTAC CCA GTAAGCGCTAG-AGCCA TTTTTGACTCTTAAT TERM 2690 3396682 - 3396713 + T 80 -16.8 -2.65737 | gap 1, opp_overlap 3396682 3396680, overlap 3396680 ACTACTAAATAAATA GCTACTAGCGCTTAC CCA GTAAGCGCTAG-AGC CATTTTTGACTCTTA TERM 2691 3396713 - 3396682 - T 95 -16.8 -3.86206 | gap 1, opp_overlap 3396680 3396682, overlap 3396680 ACTACTAAATAAATA GCTACTAGCGCTTAC CCA GTAAGCGCTAG-AGC CATTTTTGACTCTTA Ajs_3212 3398144 - 3396726 - | primary replicative DNA helicase TERM 2692 3397633 - 3397651 + g 73 -13.2 -3.27653 | overlap 3397631 TTCATCCGCGAGCCC TCTTCGCC GAT GGCGAAGA TCTTCTGCTCAGCCT TERM 2693 3398280 - 3398295 + r 83 -11.8 -4.03234 | opp_overlap 3398280 GGTGAAAAAACAAAA GCCGCC CAAG GGCGGC TTTGTATGGCAGAGC TERM 2694 3398295 - 3398280 - R 100 -11.8 -5.42198 | opp_overlap 3398280 GGTGAAAAAACAAAA GCCGCC CAAG GGCGGC TTTGTATGGCAGAGC Ajs_3213 3398778 - 3398326 - | 50S ribosomal protein L9P TERM 2695 3398584 - 3398611 + g 74 -7.6 -4.19238 | gap 1, overlap 3398581 TTCGCCTTGTGCCTG GGCGGCAGCC-AG CTT CTCGGCGGCGGCC TTTTCAAGTTCGGCG Ajs_3214 3399074 - 3398793 - | SSU ribosomal protein S18P Ajs_3215 3399383 - 3399093 - | putative primosomal replication protein Ajs_3216 3399786 - 3399409 - | SSU ribosomal protein S6P Ajs_3217 3400026 - 3400562 + | GrpE protein TERM 2696 3401411 - 3401390 - g 77 -5.1 -4.62069 | gap 1, overlap 3401391 3401394 CGGCGAGTTCAAAAA GGAACAGGGC GTG GACCTGT-CC AAGGACGTGCTGGCC Ajs_3218 3400650 - 3402590 + | molecular chaperone DnaK TERM 2697 3402617 - 3402654 + F 95 -20.6 -3.21099 | gap 1 CATCCCGTGCCTAGC CGCCGCGTCGGGCCCCG CCAGC CGGGGTTCG-CGCGGCG TTCGTGCTCCCAACC TERM 2698 3403360 - 3403330 - g 88 -7.4 -5.09762 | GGTCAAGAAACAAAA GACGCTGGAGGTGA AGA TCCCCGCCGGCATC GACGACGGCATGCGC Ajs_3219 3402686 - 3403816 + | chaperone protein DnaJ TERM 2699 3403847 - 3403829 - f 74 -13.1 -3.29144 | opp_overlap 3403829 TGACCCCCTGGACAA GGCCCGC GGACA GCGGGCC TTTTTTTGCCTGGGC TERM 2700 3403829 - 3403847 + F 100 -13.1 -5.47218 | opp_overlap 3403829 TGACCCCCTGGACAA GGCCCGC GGACA GCGGGCC TTTTTTTGCCTGGGC Ajs_3220 3404007 - 3405053 + | peptidase U32 Ajs_3221 3405163 - 3406065 + | peptidase U32 Ajs_3222 3406091 - 3406609 + | hypothetical protein Ajs_3223 3406606 - 3407004 + | hypothetical protein Ajs_3224 3407001 - 3407588 + | 3-octaprenyl-4-hydroxybenzoate carboxy-lyase TERM 2701 3409073 - 3409031 - g 76 -8.4 -4.25056 | gap 1 GACGCCACCAACAAA TGGCC-CGGGGAGACCC AGCGCGAATG GGGCCGCCCCATGGCCA TGGATGCCGGCGTGA Ajs_3225 3407645 - 3409129 + | 3-octaprenyl-4hydroxybenzoate decarboxylase Ajs_3226 3409193 - 3410353 + | cytochrome P450 Ajs_3227 3410398 - 3411762 + | beta-lactamase domain-containing protein TERM 2702 3411775 - 3411815 + F 80 -6.1 -4.7254 | opp_overlap 3411777 3411779 3411810, overlap 3411777 3411779 TAAAACAAGAGCCAA AACAGCCTCCAGCGCTTAT CTG ATGAGCGCTGAAAGCTATA TTTTTCATAGCAAAT TERM 2703 3411777 - 3411813 + F 73 -8.7 -3.98256 | opp_overlap 3411777 3411779 3411810, overlap 3411775 3411779 AAACAAGAGCCAAAA CAGCCTCCAGCGCTTAT CTG ATGAGCGCTGAAAGCTA TATTTTTCATAGCAA TERM 2704 3411813 - 3411777 - f 95 -13.1 -4.32951 | opp_overlap 3411777 3411775 3411779, overlap 3411779 3411810 AAACAAGAGCCAAAA CAGCCTCCAGCGCTTAT CTG ATGAGCGCTGAAAGCTA TATTTTTCATAGCAA TERM 2705 3411779 - 3411811 + F 73 -11.3 -3.57901 | opp_overlap 3411777 3411779 3411810, overlap 3411777 3411775 ACAAGAGCCAAAACA GCCTCCAGCGCTTAT CTG ATGAGCGCTGAAAGC TATATTTTTCATAGC TERM 2706 3411811 - 3411779 - f 84 -13.5 -3.74703 | opp_overlap 3411779 3411777 3411775, overlap 3411777 3411810 ACAAGAGCCAAAACA GCCTCCAGCGCTTAT CTG ATGAGCGCTGAAAGC TATATTTTTCATAGC TERM 2707 3412708 - 3412721 + G 70 -5.9 -4.21194 | overlap 3412709 TGGGCGTGGGCCTGC TGCCC GACC GGGCG TTTTCGCTGATGCGC Ajs_3228 3411951 - 3412907 + | LysR family transcriptional regulator TERM 2708 3413162 - 3413139 - g 73 -12.4 -3.4072 | CACGGCCGACCACAA CACCCCCACC ACCG GGTGGGAGCG CGGCTACGACGGCAT Ajs_3229 3412948 - 3414369 + | isopropylmalate isomerase large subunit Ajs_3230 3414383 - 3414505 + | entericidin EcnAB Ajs_3231 3414538 - 3414945 + | hypothetical protein leuD 3414987 - 3415637 + | isopropylmalate isomerase small subunit TERM 2709 3415712 - 3415676 - f 82 -5.8 -4.94972 | opp_overlap 3415677, overlap 3415678 GATTACAAGCAAAAA CAGCCTCCGGCGCTTA TCCAT CAAGCGCCAACAGCTA TCAAAACAGAAGTGA Ajs_3233 3415734 - 3416807 + | 3-isopropylmalate dehydrogenase TERM 2710 3416834 - 3416851 + F 100 -14.1 -4.72272 | opp_overlap 3416827 CCGCACAACGCGCCA GCGGCCC TTCG GGGCCGC TTTTTCGTGGCGCGC TERM 2711 3417029 - 3417052 + G 72 -8.8 -4.07568 | gap 1, overlap 3417033 CCGGCGCCAGTTCCG GCATCGGCCGC GCA GCGGCCC-TGC TTTTCGCGGAGGCCG Ajs_3234 3416971 - 3417744 + | short chain dehydrogenase TERM 2712 3417934 - 3417893 - f 73 -6.5 -4.3534 | gap 1, overlap 3417894 GCGCAATCACCAAAA CCACGACCATTACGG-GCTG ATC CAGCTCCGGCATCGTCGTGC GCCCTCCCTGGCCTA TERM 2713 3418120 - 3418099 - g 70 -5.9 -4.2558 | gap 1, opp_overlap 3418099 3418094 CATGGCGCAGGAAAA GGACTTCGAT CTG ATCGA-GCCC CTGTTCTTCTCCACC Ajs_3235 3418022 - 3419152 + | aspartate-semialdehyde dehydrogenase TERM 2714 3419164 - 3419181 + F 100 -12.7 -5.03715 | opp_overlap 3419164 CTGACGCAGATTCAA CGCCACC TTCG GGTGGCG TTTTTTCGAGGTCAT TERM 2715 3419181 - 3419164 - f 73 -12.7 -3.1355 | opp_overlap 3419164 CTGACGCAGATTCAA CGCCACC TTCG GGTGGCG TTTTTTCGAGGTCAT TERM 2716 3419258 - 3419246 - f 76 -10.5 -3.83155 | opp_overlap 3419246, overlap 3419237 TACCAACAGGAATAA GGCCG TCC CGGCC TCTTCCCGCACCGTA TERM 2717 3419393 - 3419378 - g 76 -2.5 -4.93296 | overlap 3419381 TCACGACCAGAAAAA TACCG CCCCCT CGGCA CCATCCATCTCTTCA TERM 2718 3420556 - 3420506 - g 80 -17.5 -2.73364 | gap 1, overlap 3420555 CTCGGACCTGAACCA GCTCAGCGGCGCCTCCGCGCCAGC CGGC GCTGGCGCAGCTGCGCCAA-GAGC CACGGCGCCTTCCGC TERM 2719 3420687 - 3420655 - g 77 -16.3 -2.62933 | overlap 3420672 3420673 CAAGCGCCGACATGA GCACTGCTACGGCAG AAG CTGCCGCACCAGCGC CCGAGGCCTCTGCCG Ajs_3236 3419322 - 3422078 + | putative transmembrane protein TERM 2720 3422847 - 3422880 + G 85 -13.1 -4.08767 | gap 1, overlap 3422847 3422850 GATGCGCACGGTGCT GG-AGGCGCGGTCGCG CGA CGCGGCTGCTCCTACC TTTTCGCCCGATGGC TERM 2721 3422847 - 3422879 + G 70 -13.3 -3.05046 | overlap 3422847 3422850 GATGCGCACGGTGCT GGAGGCGCGGTCGCG CGA CGCGGCTGCTCCTAC CTTTTCGCCCGATGG Ajs_3237 3422149 - 3422973 + | tRNA pseudouridine synthase A Ajs_3238 3422970 - 3423713 + | phosphoribosylanthranilate isomerase Ajs_3239 3423714 - 3424982 + | tryptophan synthase subunit beta Ajs_3240 3424979 - 3425788 + | tryptophan synthase subunit alpha TERM 2722 3425827 - 3425792 - f 70 -13.3 -2.8474 | gap 2, overlap 3425789 CTGGACGCATAATGA CGGCCCTGCGCGCCGGC CACG GCCCGCGCGCA-G-CCG CGATCTGAACAGAGG Ajs_3241 3425849 - 3426721 + | acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha TERM 2723 3426781 - 3426739 - T 100 -14.2 -4.72986 | opp_overlap 3426742, overlap 3426742 CACTGGCATCAAAAA CAATAGCTGCTAGCGCTTGC TGG ACGGGCGCTAGCAGCTATTT TTATTGAGAACAGTG TERM 2724 3426742 - 3426778 + T 100 -19.6 -5.06414 | opp_overlap 3426739 3426742 TGGCATCAAAAACAA TAGCTGCTAGCGCTTG CTGGA CGGGCGCTAGCAGCTA TTTTTATTGAGAACA TERM 2725 3426778 - 3426742 - T 100 -15.9 -4.47707 | opp_overlap 3426742, overlap 3426739 TGGCATCAAAAACAA TAGCTGCTAGCGCTTGC TGG ACGGGCGCTAGCAGCTA TTTTTATTGAGAACA Ajs_3242 3427348 - 3426800 - | protein of unknown function YGGT TERM 2726 3427067 - 3427051 - G 70 -2.2 -4.62069 | gap 1, overlap 3427052 3427053 GCGCCAGGCCAAAAA GC-GCCA TCCA CGGCAGC CAGGCCAGTCCTATC TERM 2727 3427286 - 3427255 - G 70 -13 -3.01001 | overlap 3427250 GATTGGCAAACGACA CCCGCTGCAGCTGC ATGT ACAGCCGCAACAGG CAAGCCCCGGTAAGC TERM 2728 3427402 - 3427366 - H 72 -13.8 -2.68493 | gap 1, overlap 3427365 3427363 CCGATTAGCAAATAG GTCGACCCCGT-TGCGG TGCG CCGCACACGGGTTCAAC GTGGGATGATAGCGA Ajs_3243 3427434 - 3428081 + | peptidase S16, lon domain-containing protein Ajs_3244 3428088 - 3429191 + | glycosyl transferase, group 1 Ajs_3245 3429188 - 3430501 + | sugar transferase Ajs_3246 3431209 - 3430505 - | hypothetical protein Ajs_3247 3431240 - 3432235 + | glycosyl transferase, group 1 Ajs_3248 3432229 - 3433101 + | putative glycosyltransferase Ajs_3249 3433119 - 3434249 + | hypothetical protein Ajs_3250 3434285 - 3435832 + | lysyl-tRNA synthetase Ajs_3251 3435906 - 3436931 + | response regulator receiver modulated diguanylate cyclase Ajs_3252 3436966 - 3437634 + | small-conductance mechanosensitive channel-like protein TERM 2729 3437933 - 3437959 + F 86 -8.7 -4.57341 | gap 1, overlap 3437936 TCTTTGCGGCCTACG TC-TCAGGCCCC CACC GGGGCCTGTTGA TTTTTCAGACCGCTT TERM 2730 3437936 - 3437955 + F 88 -15 -3.80855 | overlap 3437933 TTGCGGCCTACGTCT CAGGCCCC CACC GGGGCCTG TTGATTTTTCAGACC TERM 2731 3438030 - 3438055 + G 79 -8.2 -4.30719 | ATGCACACCGTCGTT GCCGCACTGG GTCTGG CCGGTGCCGC TTTGTTCTCCACCGC Ajs_3253 3437997 - 3439118 + | extracellular ligand-binding receptor TERM 2732 3439134 - 3439167 + F 91 -21.1 -2.57013 | opp_overlap 3439124, overlap 3439128 3439138 ACCCACCTCCCCGTC CCAAGGGTGCGTTGC GCAA GCCACGCACCCTTGG TCCATTGCATTCGGC TERM 2733 3439138 - 3439163 + F 80 -14.7 -3.22656 | opp_overlap 3439124, overlap 3439128 3439134 ACCTCCCCGTCCCAA GGGTGCGTTGC GCAA GCCACGCACCC TTGGTCCATTGCATT TERM 2734 3439180 - 3439195 + F 100 -11.8 -4.4261 | TGGTCCATTGCATTC GGCCCC TGGA GGGGCC TTTTCCTGTTGAGGG Ajs_3254 3439220 - 3440146 + | inner-membrane translocator livM 3440146 - 3441387 + | leucine/isoleucine/valine transporter permease subunit livG 3441384 - 3442151 + | leucine/isoleucine/valine transporter ATP-binding subunit Ajs_3257 3442151 - 3442864 + | ABC transporter related TERM 2735 3442888 - 3442903 + F 100 -11.8 -5.13722 | opp_overlap 3442888 TGGTGCGACACGAAA GCGGCC TACA GGCCGC TTTTCTTTTGATAGC TERM 2736 3442903 - 3442888 - f 81 -11.8 -3.83026 | opp_overlap 3442888 TGGTGCGACACGAAA GCGGCC TACA GGCCGC TTTTCTTTTGATAGC Ajs_3258 3443195 - 3443515 + | hypothetical protein Ajs_3259 3444320 - 3443868 - | alkylhydroperoxidase TERM 2737 3444387 - 3444351 - R 88 -7.3 -4.82901 | gap 2, overlap 3444352 TGTCCGGCAGAAAAA CCCGG-C-GCCAGCGAT GGGCT ACCGCTGGCTGGCCCGG CGTGCCGGCCAGCCC Ajs_3260 3445603 - 3444551 - | 6-phosphofructokinase Ajs_3261 3446727 - 3445618 - | Beta-N-acetylhexosaminidase TERM 2738 3445751 - 3445808 + g 82 -17.5 -2.90075 | overlap 3445723 TGCCAGCGGCCCGCG GCCTGCGCGGCGGCCAGGCCATCGATG AGTT CGTCCACCGCCGCGCCGCCGCCCAGGC TCTGGTTGCACAGCA TERM 2739 3446740 - 3446778 + r 74 -5.9 -4.45151 | opp_overlap 3446765, overlap 3446741 3446743 CATGCTTTCATTTTG ATAGCTACCAGCGCTTG CCACA CAAGCGCTGCGGGCTGA TTTTGCTTCAATCTT acpS 3447178 - 3446786 - | 4'-phosphopantetheinyl transferase Ajs_3263 3448009 - 3447230 - | pyridoxal phosphate biosynthetic protein PdxJ TERM 2740 3447944 - 3447961 + g 72 -6.9 -4.20918 | overlap 3447936 GCCCAGATGGCGCGT GTTGCGC ACCA GCGCCAC TTTGTTGACGTTCAC Ajs_3264 3449864 - 3448149 - | hypothetical protein TERM 2741 3449058 - 3449034 - G 85 -13.5 -4.07568 | opp_overlap 3449034 3449031 GCCGGCCGCGCAAAA GCGCTGCAGCC CGG GGCCGAAGCGC TGGCTTTCCGCCCGG TERM 2742 3449151 - 3449103 - G 70 -5.9 -4.19624 | gap 1, opp_overlap 3449105, overlap 3449099 3449105 CACGTTGAACAGAAA CACCAGCCACGCCATGA-GCCC GAGCAT GAGCGCCGTGGCGTGCCCGGTC TTCCACAGCGGTGCC Ajs_3265 3450835 - 3450047 - | DNA repair protein RecO TERM 2743 3450515 - 3450487 - G 72 -13.2 -3.10354 | gap 2 CATAGGTATCGAACA GC-GGCGCGTG-GG TGT CCTCACGCGCCAGC AGCCGCAGGAGCAGT Ajs_3266 3452102 - 3451089 - | GTP-binding protein Era Ajs_3267 3452785 - 3452099 - | ribonuclease III Ajs_3268 3453168 - 3452791 - | putative transmembrane protein Ajs_3269 3454164 - 3453196 - | signal peptidase I Ajs_3270 3455987 - 3454179 - | GTP-binding protein LepA TERM 2744 3455568 - 3455590 + g 70 -12 -3.38812 | overlap 3455566 GGCCTTGGCGGTGTC TGGATCGGCC TGG GGCAGATCCA TCTTGTTGAGCACGG TERM 2745 3456063 - 3456038 - R 100 -14 -5.58179 | CATGACAAGAAAAAA GGGCGCGTCA AACAAG CGACGCGCCC TGAACCAACAATCTT TERM 2746 3456421 - 3456395 - R 71 -13.1 -3.05384 | gap 1 TTCCCCGCTACGGAA TCG-CAGGGCTC CAGC GAGCCCTGGCGA CGCTGCCTAGCGGTT Ajs_3271 3457858 - 3456428 - | protease Do TERM 2747 3456961 - 3456987 + g 78 -10.1 -4.07568 | gap 1, overlap 3456961 3456964 CGGGGGATCCAGTCT CC-ACGCCGCGC ACCA GCGCGCCGTCGG TTTTGCCAAGCCCGA TERM 2748 3457662 - 3457644 - G 72 -5.2 -4.3467 | overlap 3457645 ACCGGGACACCAAAA CGCCGGAA GAA CTCCAGCA TGTCTTCATCCATGC Ajs_3272 3459023 - 3457998 - | sigma E regulatory protein, MucB/RseB TERM 2749 3458567 - 3458546 - G 73 -3.5 -4.63218 | GGGGCTGGAATAAAA GCCGATCGG CATC CCTCCCGGC CACGCGCTCCTGCCC Ajs_3273 3459712 - 3459089 - | anti sigma-E protein, RseA Ajs_3274 3460388 - 3459753 - | RNA polymerase sigma factor RpoE Ajs_3275 3460918 - 3460385 - | hypothetical protein TERM 2750 3460718 - 3460691 - G 86 -8.5 -4.80882 | gap 1, overlap 3460693 3460715 ATCCCACACCAAAAA GC-CTTCCGGCA GGCGG TGCCAGAAGCGC CAGGCCGCCGCCGCA Ajs_3276 3462254 - 3461010 - | 3-oxoacyl-[acyl-carrier-protein] synthase II TERM 2751 3461861 - 3461847 - G 75 -2.7 -4.7497 | TGCAGGGACGAAAAA CGGCG TGATG CGGCG CGGCCCCCGGTTGGT Ajs_3277 3462551 - 3462312 - | acyl carrier protein Ajs_3278 3463395 - 3462655 - | 3-oxoacyl-[acyl-carrier-protein] reductase Ajs_3279 3464360 - 3463392 - | [Acyl-carrier-protein] S-malonyltransferase TERM 2752 3463676 - 3463694 + g 81 -5.8 -4.82901 | overlap 3463678 3463682 CGCCCAATTCCAGTG CAGCGAGC GCG GCACGCAG TTTTTCTGCGGCGGG TERM 2753 3464405 - 3464368 - R 93 -9.1 -4.67608 | gap 1, opp_overlap 3464367 3464368 3464371 CAGTTCAAGACAAAA GCGGCT-CCAGCGCTTGC ACA GCAAGCGCAAGCAGCTAC ATTTTCAGGAGCACC Ajs_3280 3465379 - 3464402 - | 3-oxoacyl-(acyl carrier protein) synthase III Ajs_3281 3466429 - 3465398 - | phosphate:acyl-[acyl carrier protein] acyltransferase TERM 2754 3466483 - 3466469 - R 82 -5.6 -4.86731 | opp_overlap 3466454, overlap 3466470 3466471 GGCCGTTAAATAAAA GGGCCA TTT TGGCGC ACGCCAAAACGACAA TERM 2755 3466531 - 3466500 - R 100 -14.5 -4.208 | gap 1 CGCCAAAACGACAAA GGCCCGC-GCTACA TTTTT CGTAGCAGCGGGCC CGGAGGGTGCGCAGC TERM 2756 3466539 - 3466563 + r 90 -8.5 -4.89063 | overlap 3466541 AGCGGGCCCGGAGGG TGCGCAGCCTG GAT CAGGCTTCGGA TTTGTTTTTCAGTAC Ajs_3282 3466734 - 3466552 - | 50S ribosomal protein L32P Ajs_3283 3467418 - 3466867 - | hypothetical protein TERM 2757 3467635 - 3467583 - g 76 -14.9 -3.14132 | gap 4, overlap 3467568 3467566 CCGCGGCCGGACGAA GCC-CCGCGCGCG-C-TGGCACTGCGC CTG GCGCTG-GCCAAGGCGCGCGCCGTGGC CGGCCCGCATCCGCG Ajs_3284 3467445 - 3468044 + | maf protein TERM 2758 3468061 - 3468089 + G 74 -14.5 -3.02471 | opp_overlap 3468054 3468051 CGAAAGCACTGCAAC GGTTGGCCCGACC CTG GGTCGGGGCATCC TGTATCTGGTGCCAG TERM 2759 3468332 - 3468316 - g 71 -9.3 -3.82191 | CGAAGTGCACAAGAA GGGCGAC CAC GGCGCCC GGGGCCATGCATCGT Ajs_3285 3468041 - 3468847 + | uroporphyrin-III C/tetrapyrrole methyltransferase Ajs_3286 3469975 - 3468932 - | peptidase S49 Ajs_3287 3470357 - 3469980 - | Rieske (2Fe-2S) domain-containing protein Ajs_3288 3471025 - 3470357 - | HAD family hydrolase TERM 2760 3471620 - 3471603 - H 76 -14.1 -3.15861 | opp_overlap 3471593 3471591 CACCAGTTCCAGGAA GCGCGCC TGCG GGCGCGC CTGGCGCAACTGTTC TERM 2761 3473033 - 3473021 - g 70 -10.5 -3.63694 | ACTGATGCCCAACAA CCCGC GCG GCGGG GGCGTGTCGCGCCGC TERM 2762 3473749 - 3473702 - g 74 -7.7 -4.19238 | gap 3, overlap 3473685 3473684 CCGCGAAGTGGAAAA CCG-CCTGCGCGACGCGCTGCG CCAGGAC CGC-GCGCG-CGTGCAGTTCGG CACCATCAGCAAGTT TERM 2763 3475212 - 3475253 + G 73 -12.1 -3.38224 | gap 1, overlap 3475210 GACCTCCCCGCTCCC GCTGCGGCG-GCCGAGGAAG ACT CCGCCCCCGCACGCCGCAGC TATTTCGCCTCCGCT Ajs_3290 3472626 - 3475703 + | ribonuclease E TERM 2764 3475719 - 3475749 + F 84 -8.8 -4.51378 | opp_overlap 3475722, overlap 3475720 3475721 GCCCGCGCCATGGCA GAACACCGGGGGCG TCA TGCCCCCGGTGGCG TTTTATGCTATCGAT TERM 2765 3475720 - 3475748 + F 72 -12.3 -3.30104 | opp_overlap 3475722, overlap 3475719 3475721 CCCGCGCCATGGCAG AACACCGGGGGCG TCA TGCCCCCGGTGGC GTTTTATGCTATCGA TERM 2766 3475721 - 3475747 + F 77 -15.8 -2.5758 | opp_overlap 3475722, overlap 3475720 3475719 CCGCGCCATGGCAGA ACACCGGGGGCG TCA TGCCCCCGGTGG CGTTTTATGCTATCG TERM 2767 3475746 - 3475722 - f 93 -18.6 -3.32844 | opp_overlap 3475721 3475720 3475719 CGCGCCATGGCAGAA CACCGGGGGC GTCAT GCCCCCGGTG GCGTTTTATGCTATC Ajs_3291 3475845 - 3476633 + | hypothetical protein Ajs_3292 3476665 - 3477051 + | hypothetical protein Ajs_3293 3477074 - 3477943 + | 2OG-Fe(II) oxygenase TERM 2768 3477983 - 3477946 - f 84 -10.7 -4.10672 | gap 1, overlap 3477947 GGAATTCAAATGAAA TGGGCCGCTAGCGCTTAT TCG ACAAGCGCTAGCAG-CTA TCCAATCCATAGCAC queF 3478002 - 3478847 + | 7-cyano-7-deazaguanine reductase Ajs_3295 3480522 - 3478963 - | methyl-accepting chemotaxis sensory transducer TERM 2769 3480563 - 3480545 - R 72 -7.3 -4.13654 | overlap 3480538 CTCTGAAAGGACAAA CGGCCCC TCTGC GGGGCTG TCAGGAATGTGAGTA TERM 2770 3480647 - 3480627 - R 74 -9.7 -3.91911 | overlap 3480628 TTTACGTCAAGCAAA TTCGCACCA ACA TGGTGCGAC ATCCCGACCCCATCA TERM 2771 3480646 - 3480628 - R 70 -13.2 -2.94825 | overlap 3480627 TTACGTCAAGCAAAT TCGCACCA ACA TGGTGCGA CATCCCGACCCCATC Ajs_3296 3481859 - 3480660 - | DNA-directed DNA polymerase Ajs_3297 3482969 - 3482034 - | hypothetical protein TERM 2772 3482721 - 3482709 - G 70 -10.5 -3.63515 | overlap 3482688 3482686 CGCGATCTGGAAGAA CGCGC CCA GCGCG ATCCAGCCCAGGTAG Ajs_3298 3484299 - 3483127 - | (S)-2-hydroxy-acid oxidase Ajs_3299 3486798 - 3484522 - | penicillin-binding protein 1C TERM 2773 3486543 - 3486517 - GR 78 -10.1 -4.07568 | GCTGTGCTCGTAAAA GCGCCGGTCCT CGCTC AGCACCAGCGC CTGGCGCAGCGCGGG Ajs_3300 3487642 - 3486770 - | hypothetical protein Ajs_3301 3488098 - 3487721 - | hypothetical protein Ajs_3302 3488243 - 3488458 + | hypothetical protein Ajs_3303 3489346 - 3488471 - | endonuclease/exonuclease/phosphatase Ajs_3304 3490238 - 3489417 - | binding-protein-dependent transport systems inner membrane component Ajs_3305 3491288 - 3490386 - | binding-protein-dependent transport systems inner membrane component TERM 2774 3491257 - 3491222 - G 100 -24.2 -2.71364 | gap 1 CCAGTGCCGGAAGCA GCAGCAGCCAGGCGTGC ACG GCACGC-TGGCTGCTGC CCGCATCCGGCGTGC Ajs_3306 3492597 - 3491302 - | extracellular solute-binding protein TERM 2775 3491482 - 3491505 + g 79 -2.2 -5.00616 | overlap 3491484 GTCGCGCGCCACCAG CGCGGGCGGG AAGT CCTGGCCGTA TTTTTTGAGCGCCGG TERM 2776 3491764 - 3491785 + g 76 -8.7 -4.17048 | GGTCAGGTTGCCCGT GGTCGTGAT GATG ATCGCGGCC TTCTTTTCGAAGAAG Ajs_3307 3493731 - 3492691 - | ABC transporter related Ajs_3308 3496151 - 3494055 - | choline/carnitine/betaine transporter TERM 2777 3494232 - 3494214 - G 85 -5.2 -5.00616 | opp_overlap 3494220, overlap 3494215 CCCGTCGGCAAAAAA GGTGATGG GCT CCACCACG TAGAGCCGCTCCTTG Ajs_3309 3502764 - 3496696 - | alpha-2-macroglobulin domain-containing protein TERM 2778 3498163 - 3498175 + g 70 -6.2 -4.25104 | overlap 3498145 3498156 ATCGCGCAGGCCGAT GGCC TTGCT GGCC TTTTGCTCCAGGCAG TERM 2779 3501648 - 3501614 - G 72 -8.5 -4.15565 | gap 2, overlap 3501615 3501628 3501629 TCGACGATGCCAAAA GGC--GCCGCCGCAAAC TTG GCCAGCGGCGGCATGCC GCCCGTGGCCACCTT TERM 2780 3503196 - 3503235 + G 85 -9.9 -4.16842 | overlap 3503212 ACCACGAGCGCATTC CCGAGCGC-GTGGTGCACG CGCG CG-GCTCCGCAGCGCACGG TTTCTTCGAGCTCAC TERM 2781 3504625 - 3504598 - g 76 -14.8 -3.16881 | opp_overlap 3504598 3504597 CATCGACCGCATGAA GCCCACGCTGCA GGGC CGCTGCGTGGGC ATTCTGGTGGCCGAC Ajs_3310 3502946 - 3505054 + | catalase Ajs_3311 3506107 - 3505133 - | hypothetical protein TERM 2782 3505339 - 3505317 - G 88 -16.2 -3.73072 | AACTGCGCGATGAAA GCGCCGGGCG TGC CGGCCGGCGC GTAGATGCCGTAGTA Ajs_3312 3507701 - 3506241 - | argininosuccinate lyase TERM 2783 3507743 - 3507713 - H 75 -11.8 -3.62224 | ACATGGGGGCAATAA TCCGGGGGTTTCGA CAC CCGGAACGCCCGGA TGCCGCAATGCAAGA Ajs_3313 3507751 - 3508818 + | histidine kinase internal region TERM 2784 3509226 - 3509176 - g 73 -14.2 -3.17212 | gap 4 GGACTACCTGACCAA GCCCG-TGCGCCT--GC-AGCGCCTG CAG CAGGCGCTGGCCAAGGCGCAGCGCGC CGCCGTCCCCAGCGC Ajs_3314 3508865 - 3509617 + | LytR/AlgR family transcriptional regulator Ajs_3315 3510602 - 3509772 - | zinc/iron permease TERM 2785 3509813 - 3509867 + g 73 -3.5 -4.66833 | gap 4 CAAAGGTCACCACCG CGATGC-CGGCCGC-CAG-C-CAGGCG ATCTG CGCCAGCGTCTGCGCGGCCGAGAGGCG TTTTTGCAGTTGCGG TERM 2786 3510695 - 3510684 - R 100 -7.2 -5.52384 | opp_overlap 3510684 GCGCCATCAAAAAAA GCCC CGAA GGGC TTGTGTGCGTGCTGG Ajs_3316 3511614 - 3510721 - | carboxymethylenebutenolidase Ajs_3317 3514532 - 3511764 - | DNA polymerase I TERM 2787 3513712 - 3513700 - G 79 -4.7 -4.83615 | overlap 3513701 TACTTTTGATAAAAA TCGCG CAA CGCGT CCGCCTGCTCAGCGC Ajs_3318 3514675 - 3515091 + | hypothetical protein Ajs_3319 3515128 - 3515496 + | hypothetical protein Ajs_3320 3515588 - 3516538 + | homoserine kinase TERM 2788 3516754 - 3516784 + G 77 -3.9 -4.72986 | gap 2, overlap 3516747 GGGCATTCGCGTGTT CTG-GCG-CCAGCCC ATG GCGCTGGCCGCGCTG TTTTTCATGACCATG TERM 2789 3517366 - 3517414 + G 71 -9.5 -3.8512 | CGGCCTGGGCGCCGG CATGGCCGGCGGCATCATGGTGG CGA CGGCGATGATGTTGGCCGCCATG TTCTTCTCGTCGGTG Ajs_3321 3516689 - 3517516 + | hypothetical protein TERM 2790 3517722 - 3517708 - T 100 -12.8 -5.49234 | overlap 3517696 ACAGGCAAGAAAAAA CCCGCC AGA GGCGGG TTGGAAGTACCGCGG Ajs_3322 3518486 - 3517815 - | OmpA/MotB domain-containing protein TERM 2791 3518226 - 3518275 + g 73 -11.1 -3.70902 | opp_overlap 3518192 3518190 CCGCTGCGGCGGCAC CTCGGCCGCGCGCAGCAGCGTGG CCGG CCCTGCCGCCGCCTGCAGCCGGG TTTCGGTCTCGCGCG Ajs_3323 3519094 - 3518486 - | hypothetical protein Ajs_3324 3521828 - 3519378 - | ATP-dependent DNA helicase UvrD TERM 2792 3520616 - 3520581 - G 76 -6.1 -4.56597 | gap 1, overlap 3520582 GGCGCGCTCGAAAAA GCGCAGCCCGCCGTAC ACGCG GTAGGGCACGCTG-GC GTTGAACAGGGCCGA TERM 2793 3520790 - 3520806 + g 100 -10.1 -5.00616 | CGGGCTCGCCCGGGC CCTGCGT GGT GCGCAGG TTTTTTCCCAAGCGC TERM 2794 3521804 - 3521791 - G 75 -9.5 -4.11216 | TTGCCAGTGCCAAAA GGCGC TGGC GCGCC GGAAAACAGGTCGTG Ajs_3325 3521932 - 3522600 + | hypothetical protein TERM 2795 3522633 - 3522657 + F 100 -15.7 -5.64274 | opp_overlap 3522630 3522633 GGGTAGAATCAATCA CCGGGCCCAAG TTT CTTGCGCCCGG TTTTTTTGTGCCTGC TERM 2796 3522657 - 3522633 - f 79 -15.7 -2.87274 | opp_overlap 3522633, overlap 3522630 GGGTAGAATCAATCA CCGGGCCCAAG TTT CTTGCGCCCGG TTTTTTTGTGCCTGC Ajs_3326 3522792 - 3523769 + | guanosine 5'-monophosphate oxidoreductase TERM 2797 3523947 - 3523985 + T 100 -13.3 -4.77896 | opp_overlap 3523954, overlap 3523954 TAGCCCGCATGGGCA CACGAAACCCTGCTATC AAACC GGTAGCAGGGTTTTTTG TTTTTGGCTTCGTTC TERM 2798 3523978 - 3523954 - T 79 -10.7 -3.83502 | opp_overlap 3523947 3523954 CATGGGCACACGAAA CCCTGCTATCA AAC CGGTAGCAGGG TTTTTTGTTTTTGGC TERM 2799 3523954 - 3523978 + T 100 -12.2 -5.93252 | opp_overlap 3523954, overlap 3523947 CATGGGCACACGAAA CCCTGCTATC AAACC GGTAGCAGGG TTTTTTGTTTTTGGC TERM 2800 3524105 - 3524090 - T 93 -7.5 -5.23292 | CCAGACAAAAGAAAA GCCCC ACGGCG GGGGC TCATGGCGTCCTGGG TERM 2801 3524477 - 3524462 - T 100 -7.5 -5.28778 | opp_overlap 3524462 ACCAGCTACAAAAAA GCCCC ACGGCG GGGGC TTGCTATTAGGTCTT Ajs_3327 3525644 - 3524913 - | hypothetical protein Ajs_3328 3526145 - 3525699 - | hypothetical protein Ajs_3329 3526607 - 3526296 - | hypothetical protein Ajs_3330 3527085 - 3526618 - | hypothetical protein TERM 2802 3527385 - 3527431 + H 100 -13 -4.4874 | overlap 3527357 3527352 3527387 CCTAGTTTTGGCCCC GACTAGGACACGCGGTGACGTG GTA TGTGTCACGCCGTGTCCTAGGC TTTTCAATTTTTCGG TERM 2803 3527387 - 3527429 + H 74 -14.2 -2.55811 | overlap 3527357 3527352 3527385 TAGTTTTGGCCCCGA CTAGGACACGCGGTGACGTG GTA TGTGTCACGCCGTGTCCTAG GCTTTTCAATTTTTC Ajs_3331 3527572 - 3528660 + | transposase, IS4 family protein Ajs_3332 3529222 - 3528800 - | hypothetical protein Ajs_3333 3529529 - 3529215 - | hypothetical protein Ajs_3334 3530113 - 3529526 - | hypothetical protein TERM 2804 3529975 - 3530004 + g 89 -10.7 -4.27316 | CACCTTGCCGGGTAG CGCTCGATACTGC TTTT GTGGTGTCGGGCG TTTTCACTTGGCGGC Ajs_3335 3530276 - 3530091 - | hypothetical protein Ajs_3336 3530521 - 3530276 - | hypothetical protein TERM 2805 3530555 - 3530569 + r 86 -8.6 -4.57569 | overlap 3530538 CAGCAGCACAGGCCG GGTATG GTG CATACC TTTTTCGGGGCATCG TERM 2806 3530637 - 3530659 + r 100 -12 -4.6759 | overlap 3530639 ATGAATGCTAGGTTT TGCGGGGCAA CGC TTGCCCCGAA TTTTCTTGCCCTATT TERM 2807 3530639 - 3530657 + r 74 -14.6 -2.62958 | overlap 3530637 GAATGCTAGGTTTTG CGGGGCAA CGC TTGCCCCG AATTTTCTTGCCCTA Ajs_3337 3531491 - 3530670 - | hypothetical protein TERM 2808 3530834 - 3530849 + g 79 -3.2 -5.03994 | CTGCTATAGCCTCTT GGCTTG GGTG CAGGTC TTTTTCTCTCTGGCG TERM 2809 3531189 - 3531201 + g 95 -9.1 -5.0133 | CTTGTCGCCCCGATA GGCCA GCA TGGCC TTTTTTCCCAGCGTG Ajs_3338 3531874 - 3531593 - | hypothetical protein Ajs_3339 3532139 - 3531861 - | hypothetical protein Ajs_3340 3533554 - 3532196 - | phage integrase family protein TERM 2810 3532938 - 3532913 - G 73 -3.9 -4.63527 | gap 1, opp_overlap 3532933 GCACCAGCTCAAAAA GGCTTTCA-GGC AGC GCCATGCCAGCC GGGCGGATGTTGGGC TERM 2811 3533631 - 3533617 - H 78 -7.1 -4.67353 | CCATGTAGCCAAAAA CCCCA TATTT TGGGG AATATCAATCAACGC TERM 2812 3533825 - 3533801 - H 95 -20.1 -3.22274 | opp_overlap 3533801, overlap 3533796 3533792 3533794 ACCAAAGACAGCCAA GCCGAATCCGC AGC GCGGATTCGGC TTTTTTCATGGCGAT TERM 2813 3533801 - 3533825 + H 100 -20.1 -5.14965 | opp_overlap 3533801 3533796 3533792 3533794 ACCAAAGACAGCCAA GCCGAATCCGC AGC GCGGATTCGGC TTTTTTCATGGCGAT Ajs_3341 3534001 - 3534666 + | Crp/FNR family transcriptional regulator Ajs_3342 3534690 - 3535136 + | hypothetical protein TERM 2814 3535166 - 3535140 - f 78 -10.1 -4.08216 | gap 1, opp_overlap 3535140 3535141, overlap 3535141 GCACCGTTTTGAAAA CGGCGGGCACGG GCCC CCGTGCAC-CCG CCCTTCTCCCGCATA Ajs_3343 3535230 - 3535718 + | hypothetical protein TERM 2815 3536833 - 3536859 + G 76 -6.6 -4.54821 | gap 1 CGCTGGCGCCGCATG TGTCG-TGGGC GCTGTG GCCCATCGGCA TTTTCTCGTTCGGCT TERM 2816 3536919 - 3536957 + G 81 -16.6 -3.14132 | CTGGTGCTGGACCTG TACCCGCAGCGCCGGGGC ATG GCCTCGTCGCTGCAGGCA TTCGTGGGCGCCACG Ajs_3344 3535899 - 3537134 + | Bcr/CflA subfamily drug resistance transporter TERM 2817 3537385 - 3537361 - T 100 -12.9 -5.4505 | opp_overlap 3537361 GCGCGCAATAAAAAA GCCAGCCCT GGACGAG AGGGCTGGC TTGTCATGTGTTCCG TERM 2818 3537361 - 3537385 + T 76 -12.9 -3.52475 | opp_overlap 3537361 GCGCGCAATAAAAAA GCCAGCCCT GGACGAG AGGGCTGGC TTGTCATGTGTTCCG Ajs_3345 3539288 - 3537411 - | DEAD/DEAH box helicase domain-containing protein TERM 2819 3538038 - 3538012 - G 70 -10.9 -3.5764 | opp_overlap 3538019 3538032, overlap 3537999 3538000 AAGGTCACGGCCAAA CCGT-CGCGGCCG GCG CGGCC-CGTACGG CCGATGCGGTGCGTG TERM 2820 3539324 - 3539303 - R 70 -12.3 -3.18264 | gap 1, opp_overlap 3539303 3539303 3539318, overlap 3539304 TGTCGTATGTATGAA GCGCGCGGGT GCA ACCCGCG-GC GGCTTCGTCAGTGGT Ajs_3346 3540149 - 3539571 - | oligoribonuclease Ajs_3347 3540188 - 3541501 + | Ste24 endopeptidase Ajs_3348 3541498 - 3541836 + | pterin-4-alpha-carbinolamine dehydratase Ajs_3349 3541841 - 3542809 + | ribosome small subunit-dependent GTPase A Ajs_3350 3543861 - 3542875 - | cobalamin biosynthesis protein CbiB Ajs_3351 3544674 - 3543940 - | NUDIX hydrolase TERM 2821 3544685 - 3544711 + r 77 -13.1 -3.59979 | gap 1, opp_overlap 3544685 GTCAAAAAGAAAAAA CCGCTACAG-GC TTTC GCACTGTAGCGG TTTCGAGTCGCGCGG TERM 2822 3544711 - 3544685 - R 100 -13.1 -5.93252 | gap 1, opp_overlap 3544685 GTCAAAAAGAAAAAA CCGCTACAG-GC TTTC GCACTGTAGCGG TTTCGAGTCGCGCGG TERM 2823 3544758 - 3544781 + r 84 -8.2 -4.45544 | overlap 3544746 TATGCGGCCACTGCA GCTGCCTT GACGCGCG AAGGCAGC TTTTCCTTGATACGC Ajs_3352 3545125 - 3544742 - | 50S ribosomal protein L19P TERM 2824 3545166 - 3545183 + r 76 -9.8 -3.96188 | CGCCAGGATTGGCAG GGCGCC CCTATT GGCGCC TTTGTGGCTATGGTT Ajs_3353 3546006 - 3545239 - | tRNA (Guanine37-N1) methyltransferase TERM 2825 3545322 - 3545375 + g 70 -11 -3.58343 | gap 2, overlap 3545323 CGGCCTGCAACAGGT CCGGGCGGTGGCGCGCAGTGATGAGC AGGC GCTGATCGC-GC-CGCCAGCGCTCGA TTTGCGCATGGTGGC TERM 2826 3545323 - 3545374 + g 72 -14.5 -2.74792 | gap 2, overlap 3545322 GGCCTGCAACAGGTC CGGGCGGTGGCGCGCAGTGATGAGC AGGC GCTGATCGC-GC-CGCCAGCGCTCG ATTTGCGCATGGTGG Ajs_3354 3546654 - 3546025 - | 16S rRNA processing protein RimM TERM 2827 3546671 - 3546625 - G 100 -23.2 -3.65351 | opp_overlap 3546630 3546631, overlap 3546631 3546659 CGATGGTGAGGCAAA GAAAAAGGCGGGGTCCGTCAGT TGC ACCAACGGAGCCCGCCCTTTTC GGGAGTGCGAACGAT TERM 2828 3546630 - 3546666 + g 81 -10.7 -4.09685 | opp_overlap 3546625 3546631 3546659, overlap 3546631 GTGAGGCAAAGAAAA AGGCGGGGTCCGTCAGT TGC ACCAACGGAGCCCGCCC TTTTCGGGAGTGCGA TERM 2829 3546665 - 3546631 - G 100 -18.6 -5.30616 | opp_overlap 3546630 3546631, overlap 3546625 3546659 TGAGGCAAAGAAAAA GGCGGGGTCCGTCAGT TGC ACCAACGGAGCCCGCC CTTTTCGGGAGTGCG TERM 2830 3546631 - 3546665 + g 72 -14.2 -3.05597 | opp_overlap 3546631 3546625 3546659, overlap 3546630 TGAGGCAAAGAAAAA GGCGGGGTCCGTCAGT TGC ACCAACGGAGCCCGCC CTTTTCGGGAGTGCG Ajs_3355 3546937 - 3546686 - | SSU ribosomal protein S16P TERM 2831 3546914 - 3546893 - G 70 -10.1 -3.63991 | gap 1 GACGATGTTGAAGAA CGGACGGCCC TTG GAGCCG-CCG CGGGAGAGTCGAATC TERM 2832 3547076 - 3547064 - H 91 -3.4 -5.5208 | CCACAACACAAAAAA GATG CCCCT CATC CGCGCCAGCCGGGAC Ajs_3356 3547065 - 3547586 + | GCN5-related N-acetyltransferase Ajs_3357 3547609 - 3548055 + | hypothetical protein Ajs_3358 3549202 - 3548192 - | phosphate transporter TERM 2833 3549062 - 3549044 - G 70 -10.2 -3.68936 | overlap 3549055 GACGAAGTTGAAGAA GGCCGCGA AGA CCACGGCC TGCGTGGGCTTGAGC Ajs_3359 3549909 - 3549262 - | hypothetical protein TERM 2834 3549891 - 3549875 - G 88 -8 -5.04987 | AACATCTCGAAAAAA TTGCCC TCGCG GGGCAA CAGCTTTCCAAACAA Ajs_3360 3550443 - 3550081 - | hypothetical protein TERM 2835 3550538 - 3550514 - R 100 -8.6 -5.28176 | gap 1, opp_overlap 3550517, overlap 3550518 GGTAGCTATAAAAAA CAAAGCACCGC CGCA GCGGTGCC-TG TTCCAGCGGCCAGCG TERM 2836 3550535 - 3550518 - R 100 -12.7 -5.13354 | opp_overlap 3550517, overlap 3550514 GCTATAAAAAACAAA GCACCGC CGCA GCGGTGC CTGTTCCAGCGGCCA Ajs_3361 3551291 - 3550563 - | ABC transporter related TERM 2837 3550671 - 3550689 + g 70 -11.7 -3.40403 | GCCGCGGTCGGCAAT CGCCAGC GCGCG GCTGGCG TTCTGCTCCACCAGC Ajs_3362 3552086 - 3551304 - | ABC transporter related Ajs_3363 3553184 - 3552108 - | inner-membrane translocator TERM 2838 3552598 - 3552584 - G 72 -5.7 -4.38171 | overlap 3552576 GATAGCACACCAAAA TGGTG ACCAG CACCA GGAACAGGAACAGGT TERM 2839 3553153 - 3553176 + g 86 -8.2 -4.7871 | gap 1, overlap 3553153 3553155 AGCAGCGCAATGCCG CC-CAGGATCC ATT GGATCTTGTGG TTTTTCATGGTCGTT Ajs_3364 3554127 - 3553198 - | inner-membrane translocator TERM 2840 3554247 - 3554223 - R 93 -7.8 -5.1675 | gap 1, opp_overlap 3554223 CCATCTAGCAAAAAA CCCGC-CAGGC AAGG GTCTGCGCGGG TTTGTGAAGAAATTG TERM 2841 3554223 - 3554247 + r 76 -10 -3.86822 | gap 1, opp_overlap 3554223 CCATCTAGCAAAAAA CCCGC-CAGGC AAGG GTCTGCGCGGG TTTGTGAAGAAATTG TERM 2842 3554278 - 3554304 + r 73 -6.4 -4.32201 | opp_overlap 3554278 3554276, overlap 3554271 3554271 TAGTCAGAGGAAACA CGCCGTCCCTAC CAC GTTTGGACGGGG TTTTCCCTTGATTGG Ajs_3365 3555812 - 3554484 - | recombination factor protein RarA TERM 2843 3554517 - 3554543 + g 72 -13.6 -3.18429 | GTCGTCGGGGCCACC CTGCGCGGCCGC ATT GCGCGCGCGCAG TTCATCGAGCTTTTG TERM 2844 3554744 - 3554778 + g 79 -12 -3.7941 | overlap 3554732 GGTGCAGCGGCACGG GGCGCGTGCCGTCCTG CTT CACGAAGGCGCGGGCC TTGTTGTAGGCCATG Ajs_3366 3556807 - 3555809 - | integron integrase Ajs_3367 3556965 - 3557945 + | transposase, IS4 family protein TERM 2845 3558165 - 3558177 + G 73 -6.3 -4.37506 | overlap 3558156 3558171 TATTCCAGCGCTTCG CCTTT CTC AAAGG TTTCTCTTTGGTGGT TERM 2846 3558295 - 3558322 + G 91 -9 -4.72272 | opp_overlap 3558271 GCTATCATTCTTGCA GCGCTGCTCCGC TTCG GTGGCCCAGCGC TTTTTCATGGGCCGC TERM 2847 3558395 - 3558418 + G 87 -14.6 -3.77639 | gap 1 TAACTCTGCGCTCAA GCGGACCCGCA TTC TGCGGG-CCGC TTATCTTGTCCGTTA Ajs_3368 3558135 - 3558434 + | hypothetical protein TERM 2848 3558678 - 3558690 + G 77 -3.3 -4.87133 | TTTTATGCACTGTTC GCGCT GGC AGCAC TTTTGTTTGCAGCAT Ajs_3369 3558444 - 3558713 + | hypothetical protein TERM 2849 3558944 - 3558922 - f 74 -12.7 -3.32402 | gap 1, opp_overlap 3558928, overlap 3558920 3558918 3558923 CCCACATTAAAGAGA GCC-GCCGGG CTTG CCCGGCAGGC CGTTGGTCGGCGGCA Ajs_3370 3559013 - 3560239 + | transposase IS116/IS110/IS902 family protein TERM 2850 3560330 - 3560364 + F 71 -11.5 -3.4285 | gap 2, opp_overlap 3560324 CCACATTAACCCGTC GGTCAAGCGGACAGGCC TTC GGCCAG-CCGCTT-ACC TTGTCCGTTAGATCA Ajs_3371 3560381 - 3560638 + | hypothetical protein TERM 2851 3560645 - 3560679 + F 90 -8.7 -4.90266 | gap 2, opp_overlap 3560651, overlap 3560646 3560651 GTGGTCTAACCCGGC ACTCAAGCCGACCCGCA TAC TGCGG-TCGGCTT-AGC TTTTTCGTTAGTCCC TERM 2852 3560646 - 3560678 + F 74 -12.2 -3.53437 | gap 2, opp_overlap 3560651, overlap 3560645 3560651 TGGTCTAACCCGGCA CTCAAGCCGACCCGCA TAC TGCGG-TCGGCTT-AG CTTTTTCGTTAGTCC TERM 2853 3560651 - 3560674 + F 76 -13.2 -3.48824 | gap 1, opp_overlap 3560651, overlap 3560646 3560645 TAACCCGGCACTCAA GCCGACCCGCA TAC TGCGG-TCGGC TTAGCTTTTTCGTTA TERM 2854 3560674 - 3560651 - f 71 -13.2 -3.06133 | gap 1, opp_overlap 3560651 3560646 3560645 TAACCCGGCACTCAA GCCGACCCGCA TAC TGCGG-TCGGC TTAGCTTTTTCGTTA TERM 2855 3560749 - 3560760 + G 77 -5.8 -4.62069 | opp_overlap 3560749 CGGCCCTGTTCCAAA GGCT TTCT AGCC TTTTTGGCCTCCAGC TERM 2856 3560813 - 3560840 + G 95 -9 -5.08601 | opp_overlap 3560789, overlap 3560810 3560814 GCTATCATTCTTGCA GCGCTGCGCCGC TTCC GTGGCCCAGCGG TTTTTCTTGGGCTGC TERM 2857 3560814 - 3560839 + G 77 -12.5 -3.64438 | opp_overlap 3560789, overlap 3560810 3560813 CTATCATTCTTGCAG CGCTGCGCCGC TTCC GTGGCCCAGCG GTTTTTCTTGGGCTG TERM 2858 3560908 - 3560940 + G 77 -13.6 -3.61764 | gap 2, opp_overlap 3560913, overlap 3560913 3560926 GGGTCTAACTCTGCA GTCAAGCGGACTGGCC TAC GGCCAG-CCGCTT-AC TTTGGCCGTTAGTCC TERM 2859 3560936 - 3560913 - g 74 -14.6 -3.06133 | gap 1, opp_overlap 3560908 3560913 3560926 TAACTCTGCAGTCAA GCGGACTGGCC TAC GGCCAG-CCGC TTACTTTGGCCGTTA TERM 2860 3560913 - 3560936 + G 81 -14.6 -3.52918 | gap 1, opp_overlap 3560913, overlap 3560908 3560926 TAACTCTGCAGTCAA GCGGACTGGCC TAC GGCCAG-CCGC TTACTTTGGCCGTTA Ajs_3372 3560707 - 3560952 + | hypothetical protein TERM 2861 3561075 - 3561102 + G 100 -13.4 -4.72272 | overlap 3561072 3561088 GCTATCATTCTTGCA GTGCTGCGCCGC TTCC GTGGCCCAGCAC TTTTTGGTGGGCCGC Ajs_3373 3560969 - 3561250 + | hypothetical protein TERM 2862 3561393 - 3561371 - f 74 -12.7 -3.32402 | gap 1, opp_overlap 3561377, overlap 3561369 3561367 3561372 CCCACATTAAAGAGA GCC-GCCGGG CTTG CCCGGCAGGC CGTTGGTCGGCGGCA Ajs_3374 3561462 - 3562688 + | transposase IS116/IS110/IS902 family protein Ajs_3377 3565091 - 3563865 - | transposase IS116/IS110/IS902 family protein TERM 2863 3565160 - 3565182 + r 74 -12.7 -3.32402 | gap 1, opp_overlap 3565158, overlap 3565159 3565156 3565162 TGCCGCCGACCAACG GCCTGCCGGG CAAG CCCGGC-GGC TCTCTTTAATGTGGG Ajs_3378 3566712 - 3565486 - | transposase IS116/IS110/IS902 family protein TERM 2864 3566781 - 3566803 + H 74 -12.7 -3.32402 | gap 1, opp_overlap 3566779, overlap 3566780 3566777 3566783 TGCCGCCGACCAACG GCCTGCCGGG CAAG CCCGGC-GGC TCTCTTTAATGTGGG Ajs_3379 3567122 - 3567511 + | hypothetical protein TERM 2865 3567828 - 3567846 + G 79 -8.8 -4.34402 | overlap 3567830 TGACCCGGCGCGCGT GGCCATCG TGC CGATGGGC TTTTGCTATCCGGGC Ajs_3380 3567511 - 3568176 + | uracil-DNA glycosylase superfamily protein Ajs_3381 3568869 - 3568237 - | outer membrane lipoprotein carrier protein LolA Ajs_3382 3571261 - 3568931 - | DNA translocase FtsK TERM 2866 3570912 - 3570892 - G 81 -16.1 -3.21276 | overlap 3570868 3570890 GGCCGCCCCAGAATA CGCCGCGGC GCT GCCACGGCG CGTGGCCTGCGGCGC TERM 2867 3571313 - 3571357 + H 82 -5.5 -4.87665 | gap 1, overlap 3571314 CGCGTCTGTGCGCCG TGCGCTGCGTGCGGCAGCCC GCCCCA GGCCTGCCGGCTGC-GCGCC TTTTTGTCACTGCGC Ajs_3383 3571554 - 3572507 + | thioredoxin reductase TERM 2868 3572530 - 3572557 + F 100 -9.8 -4.87626 | overlap 3572527 AGCCCTGCCCACCCG GCTCCTGCAGGT TTCG GCATGCAGGGGC TTTTTGATATTCGGG Ajs_3384 3572741 - 3572974 + | 50S ribosomal protein L28P Ajs_3385 3572995 - 3573165 + | 50S ribosomal protein L33P TERM 2869 3573213 - 3573189 - T 100 -18.5 -4.56597 | opp_overlap 3573189 3573202 GGCTCCTGTCAAAAA GCCGCCCGGCG TTG CGCCCGGCGGC TTTTTTCATGTCCAG TERM 2870 3573189 - 3573213 + T 100 -18.5 -5.21709 | opp_overlap 3573189, overlap 3573202 GGCTCCTGTCAAAAA GCCGCCCGGCG TTG CGCCCGGCGGC TTTTTTCATGTCCAG TERM 2871 3573270 - 3573244 - T 100 -15.9 -5.24129 | gap 1, opp_overlap 3573202 CGTGGGCATAAAAAA CCGCGGC-ACCC TTTC GGGTCGCCGCGG TACTGCGGTCAGAAG Ajs_3386 3574515 - 3573304 - | fatty acid desaturase Ajs_3387 3575925 - 3574648 - | Fmu (Sun) domain-containing protein Ajs_3388 3577906 - 3575969 - | peptidase M48, Ste24p TERM 2872 3577408 - 3577421 + g 77 -3.7 -4.82901 | overlap 3577401 3577409 ATTCGTGGGCCAGCA CCGCC AGCA GGCGC TTTTTGTCCAGCGCC Ajs_3389 3577948 - 3578205 + | hypothetical protein Ajs_3390 3578414 - 3578971 + | hypothetical protein Ajs_3391 3579620 - 3579036 - | phosphoribosylglycinamide formyltransferase Ajs_3392 3579644 - 3580321 + | hypothetical protein Ajs_3393 3580409 - 3581590 + | acyl-CoA dehydrogenase domain-containing protein Ajs_3394 3581603 - 3582718 + | acyl-CoA dehydrogenase domain-containing protein TERM 2873 3582742 - 3582778 + F 71 -10.8 -3.49653 | opp_overlap 3582731 3582747, overlap 3582744 AGCAGCGCTTCTCGG AAGCATCTCCGCTGGC TTAGC GCTTGCGGGGATGCTG TTGTGTGCAGATGCT TERM 2874 3582744 - 3582776 + F 77 -13.4 -3.32202 | opp_overlap 3582731 3582747, overlap 3582742 CAGCGCTTCTCGGAA GCATCTCCGCTGGC TTAGC GCTTGCGGGGATGC TGTTGTGTGCAGATG TERM 2875 3583598 - 3583575 - g 79 -3.8 -4.87291 | overlap 3583580 CAGTTCAACCAAAAA CCAAAGTCAC GAGC GTGACCCCGA GATGCATCAAAGCAA TERM 2876 3583593 - 3583580 - g 75 -6.7 -4.37737 | overlap 3583575 CAACCAAAAACCAAA GTCAC GAGC GTGAC CCCGAGATGCATCAA Ajs_3395 3583117 - 3584103 + | transposase, IS4 family protein Ajs_3396 3584263 - 3585582 + | methyltransferase type 12 TERM 2877 3585625 - 3585610 - T 100 -11.8 -5.14563 | opp_overlap 3585610 GGCCTCATCAAAAAA CGCGGC CAAG GCCGCG TTTTTTGTTACCCGC TERM 2878 3585610 - 3585625 + T 100 -11.8 -5.4505 | opp_overlap 3585610 GGCCTCATCAAAAAA CGCGGC CAAG GCCGCG TTTTTTGTTACCCGC Ajs_3397 3586203 - 3585646 - | HNH endonuclease Ajs_3398 3586366 - 3587409 + | bifunctional riboflavin kinase/FMN adenylyltransferase TERM 2879 3587407 - 3587460 + F 71 -10.7 -3.40522 | gap 1, opp_overlap 3587405, overlap 3587408 ACCCGCGACCGAATT TGACGGGGCCGCCTTCGCCCCGCCAG CGC TTGGCGGGTCGC-GCCAGCCCCGCCC TTGTCCTGCCCCCGT TERM 2880 3587408 - 3587459 + F 74 -14.2 -2.64099 | gap 1, opp_overlap 3587405, overlap 3587407 CCCGCGACCGAATTT GACGGGGCCGCCTTCGCCCCGCCAG CGC TTGGCGGGTCGC-GCCAGCCCCGCC CTTGTCCTGCCCCCG TERM 2881 3587691 - 3587673 - g 74 -10.2 -3.8211 | opp_overlap 3587672 3587674, overlap 3587674 GGGCATCTACAAGAA GCTGCGCG ACG CGCGAAGC GGCGCGCCGAAGTTC TERM 2882 3587904 - 3587877 - g 72 -6.8 -4.19704 | GAACGCCATCGAAAA GCTGCACGGCCG CAAC CTGCCGCGCGAC GAGATGCAGGCCAAG Ajs_3399 3587524 - 3590379 + | isoleucyl-tRNA synthetase Ajs_3400 3590379 - 3590876 + | signal peptidase II TERM 2883 3591212 - 3591267 + G 77 -14 -3.35996 | gap 2 TGATCACGCTGCCCG CGGCGCTGGCCGTGATGCGCGGCGCC GACGTA GGCACCGCGC-TCATGTCC-GTGCTG TTCTCGCTGGACCTG Ajs_3401 3590971 - 3592641 + | Na/Pi-cotransporter II-related protein Ajs_3402 3593621 - 3592632 - | hypothetical protein TERM 2884 3593127 - 3593088 - G 82 -16.5 -3.33696 | GTGCCCCGCAACGAA GGGCAGCATCAGCTGCA GCATGA TGCGACCGATGCTGCCC AGCACATCCTGCTGC TERM 2885 3593537 - 3593523 - G 77 -7 -4.56597 | overlap 3593524 GGCCTTCTCGAAAAA CGCGCC CAC GGCGCC GGATGCAGGCAGCAG TERM 2886 3594010 - 3593988 - H 74 -12.7 -3.32402 | gap 1, opp_overlap 3593994, overlap 3593986 3593984 3593989 CCCACATTAAAGAGA GCC-GCCGGG CTTG CCCGGCAGGC CGTTGGTCGGCGGCA Ajs_3403 3594079 - 3595305 + | transposase IS116/IS110/IS902 family protein Ajs_3404 3596274 - 3595453 - | NUDIX hydrolase TERM 2887 3596159 - 3596145 - G 71 -3.4 -4.58283 | overlap 3596146 3596147 CAATCTGGTCAAAAA CCGCGG CAT CCACCG ACCCCACGCACTCGC TERM 2888 3596232 - 3596270 + g 95 -20.2 -2.71731 | opp_overlap 3596187, overlap 3596262 GCGCCTGCCGGCGTG CGGCGGCCACCCAGGCGG GCG CCGGCTGGCTGGGCGCCG TCATTCCAGCGTGAG TERM 2889 3596837 - 3596857 + H 76 -6 -4.63486 | opp_overlap 3596822 3596826 CGAAGTCGCCGGGCT CCAGCCCT TCGAC GGGGCGGG TTTTCTTCAGCAGGT Ajs_3406 3597389 - 3598291 + | hypothetical protein TERM 2890 3599170 - 3599147 - T 70 -10.2 -3.62597 | GCGAGGGTCGAAGAA GCACACCGCG TTGC CGCGCTGCGC CTTGACCTGGTACAT Ajs_3408 3602082 - 3601000 - | TRAP dicarboxylate transporter- DctP subunit TERM 2891 3601533 - 3601517 - G 90 -3.6 -5.40474 | overlap 3601518 3601519 AGCGCCGCAAAAAAA TCGCCC TGCGC GGCCGA GGACACCCGCACATG Ajs_3410 3602540 - 3603628 + | transposase, IS4 family protein TERM 2892 3604032 - 3604054 + T 73 -12.7 -3.14344 | gap 1, opp_overlap 3604032 3604031 CCCACTCGCGGAAAT CGCCGGGCGG GGGG CCGC-CGGCG TTGGTGACCACGATG TERM 2893 3605000 - 3604982 - T 100 -13.1 -5.64274 | overlap 3604995 CCACGCATAAAAAAA GCGCCCC GGAAA GGGGCGC CTTGCAAGGGGTGCC Ajs_3411 3606555 - 3605044 - | hypothetical protein TERM 2894 3605184 - 3605200 + g 73 -3.5 -4.69053 | opp_overlap 3605160 3605158 3605184, overlap 3605185 CGCCACGCGACAGCA GCAGCGC ACG GCGCAGG TTTTCTTCCATCATC Ajs_3412 3607060 - 3606572 - | hypothetical protein Ajs_3413 3609158 - 3607362 - | type II secretion system protein E TERM 2895 3608301 - 3608322 + g 78 -10.1 -4.08216 | gap 1 GTTGCGCGTCTTGAT GCGGCCGTCC TGC GGGCGGC-GC TTTTCCACCACGTCC Ajs_3414 3609940 - 3609179 - | hypothetical protein Ajs_3415 3610568 - 3609945 - | hypothetical protein TERM 2896 3610463 - 3610480 + g 95 -2.6 -5.60993 | GGCCGACCAGACGAC CGGCAG ACAGCA CTACCG TTTTTTTCTGCGCAG Ajs_3416 3611420 - 3610575 - | TatD-related deoxyribonuclease Ajs_3417 3611727 - 3611530 - | hypothetical protein Ajs_3418 3612091 - 3611783 - | ArsR family transcriptional regulator Ajs_3419 3612205 - 3612576 + | alkylhydroperoxidase Ajs_3420 3613312 - 3612632 - | lipoprotein releasing system, ATP-binding protein Ajs_3421 3614558 - 3613305 - | LolC/E family lipoprotein releasing system, transmembrane protein Ajs_3422 3615886 - 3614696 - | glycerophosphoryl diester phosphodiesterase Ajs_3423 3616003 - 3616959 + | hypothetical protein TERM 2897 3617554 - 3617583 + G 74 -15 -3.01712 | gap 1 TCTACGTGCTCATGG CGCTGCGCGC-CG AGCTG CGCGCGCGCGGCG TGTTCGACAAGGCCA Ajs_3424 3616956 - 3618680 + | single-stranded-DNA-specific exonuclease RecJ Ajs_3425 3618775 - 3619077 + | putative lipoprotein Ajs_3426 3620186 - 3619206 - | transposase, IS4 family protein TERM 2898 3620795 - 3620777 - g 85 -10.2 -4.20042 | ACGAATACCTCAAAA GCAGCGGC AAT GCCGATGC TGAACAGCAAGTGGC Ajs_3428 3620641 - 3621018 + | hypothetical protein TERM 2899 3621313 - 3621335 + G 83 -4 -5.14965 | opp_overlap 3621302 3621312, overlap 3621315 AAGACGCACAGGAAT TGCCCGTGGC CAA GTTGCGGGAA TTTTTTGGTGCAGAT Ajs_3429 3621015 - 3621689 + | hypothetical protein TERM 2900 3621745 - 3621726 - T 70 -10.6 -3.57971 | opp_overlap 3621727, overlap 3621727 ATATGGATGGCGAAA GGCGCGGC ACAG GCCGCGCT TTTTTTGTCCCGACT TERM 2901 3621744 - 3621727 - T 72 -14.1 -2.74461 | opp_overlap 3621727, overlap 3621726 TATGGATGGCGAAAG GCGCGGC ACAG GCCGCGC TTTTTTTGTCCCGAC TERM 2902 3621727 - 3621744 + T 100 -14.1 -5.60993 | opp_overlap 3621727 3621726 TATGGATGGCGAAAG GCGCGGC ACAG GCCGCGC TTTTTTTGTCCCGAC Ajs_3430 3623550 - 3621796 - | methyl-accepting chemotaxis sensory transducer TERM 2903 3622537 - 3622578 + g 77 -13.7 -3.35813 | gap 1, overlap 3622538 CACCTGGCCCACCAC TTCGCCGCC-ACGCTCTGCG GCC TGCGCGGCGTTGGCGGCGAG TTGGTTGGCCTGGCG TERM 2904 3622538 - 3622577 + g 71 -15 -2.61274 | gap 1, overlap 3622537 ACCTGGCCCACCACT TCGCCGCC-ACGCTCTGCG GCC TGCGCGGCGTTGGCGGCGA GTTGGTTGGCCTGGC Ajs_3431 3623754 - 3624632 + | phosphotransferase domain-containing protein Ajs_3432 3624648 - 3625283 + | Sua5/YciO/YrdC/YwlC family protein Ajs_3433 3627477 - 3625408 - | von Willebrand factor, type A TERM 2905 3625566 - 3625546 - G 74 -7.6 -4.18494 | gap 1, opp_overlap 3625559, overlap 3625547 GATGGTCAGGCAAAA CGGC-GCAA TGCC TTGCAGCCG CGCCTCGGTCACGGC TERM 2906 3626348 - 3626295 - G 83 -15.9 -3.54475 | overlap 3626292 3626296 CGGGGTAGTACAGAA CGTCGACGCCCGGCGC-GGCGGCCG CACCAC CGCCCGCCCGCGCCTGGCG-CGCCA GATGCTCCGGCGGGT TERM 2907 3626347 - 3626296 - G 80 -17.2 -2.72471 | overlap 3626292 3626295 GGGGTAGTACAGAAC GTCGACGCCCGGCGC-GGCGGCCG CACCAC CGCCCGCCCGCGCCTGGCG-CGCC AGATGCTCCGGCGGG Ajs_3434 3628283 - 3627480 - | ATPase Ajs_3435 3629676 - 3628303 - | cytochrome c oxidase, subunit I Ajs_3436 3630579 - 3629707 - | cytochrome c, class I TERM 2908 3631073 - 3631088 + G 75 -6.8 -4.35646 | gap 1 ACTGCTGCTGTATTT CGCCACC TCG GG-GGCG TTTCTGTTTGGCTAT TERM 2909 3631357 - 3631384 + G 70 -4 -4.52857 | overlap 3631359 GGGGGCGCATCCTCG TCGGCCTGCTGC CGTG GAAGCAAGCCCA TTTTCTCTCGCGCAT Ajs_3437 3630852 - 3631538 + | peptidase M50 Ajs_3438 3631563 - 3632867 + | tryptophanyl-tRNA synthetase TERM 2910 3632992 - 3633018 + F 100 -16.7 -4.98531 | opp_overlap 3632992 CGCACCAAGAAAAAA GCCTTGCAAGC GACTG GCTTGCAAGGC TTTTTAGTTTGGCGG TERM 2911 3633018 - 3632992 - f 100 -16.7 -5.5112 | opp_overlap 3632992 CGCACCAAGAAAAAA GCCTTGCAAGC GACTG GCTTGCAAGGC TTTTTAGTTTGGCGG Ajs_3439 3633155 - 3633439 + | hypothetical protein TERM 2912 3634221 - 3634199 - f 74 -12.7 -3.32402 | gap 1, opp_overlap 3634205, overlap 3634197 3634195 3634200 CCCACATTAAAGAGA GCC-GCCGGG CTTG CCCGGCAGGC CGTTGGTCGGCGGCA Ajs_3441 3634290 - 3635516 + | transposase IS116/IS110/IS902 family protein TERM 2913 3635902 - 3635873 - T 73 -10.7 -3.58037 | overlap 3635864 CAGGAACTGCGCAAA CAGGCCAATCATG ATGC CTTGACCGGCCTG CTCAATCGTCGCGCT TERM 2914 3636356 - 3636328 - T 82 -3 -5.18643 | overlap 3636329 CCAAGCAAAACAAAA TGGCCGCAACCA AGTGG TGATGGCAGCCT GAGAAGCTCTTCAGT Ajs_3442 3637131 - 3636367 - | diguanylate phosphodiesterase Ajs_3444 3637389 - 3637955 + | hypothetical protein TERM 2915 3638367 - 3638351 - T 81 -7.2 -4.39571 | opp_overlap 3638351, overlap 3638352 TGTAGAAATGCAAAA CGGGCC ACTCG GGCCCA TCTGATATGAATACT Ajs_3445 3639832 - 3638504 - | seryl-tRNA synthetase Ajs_3446 3639965 - 3640645 + | signal transduction protein TERM 2916 3640670 - 3640709 + T 72 -12.1 -3.39482 | gap 1 GCCGCTCGCAGGATC GGCGCTGACCTCCTCGTC GGGCA GGCG-GGAGGCCAGCACC TTGTCGATGGTCTTG Ajs_3447 3641971 - 3640649 - | hypothetical protein Ajs_3448 3643216 - 3642221 - | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase Ajs_3449 3643607 - 3643230 - | peptidylprolyl isomerase, FKBP-type TERM 2917 3643970 - 3643989 + G 70 -10.6 -3.55622 | GCGACTCCGCCACGG GCCGCAGC GCTG GCGGCGGC TTTGGCGGCATTGCC Ajs_3450 3643789 - 3644505 + | DNA repair protein RadC Ajs_3451 3644502 - 3645716 + | hypothetical protein Ajs_3452 3645689 - 3646372 + | Smr protein/MutS2 TERM 2918 3646478 - 3646449 - T 100 -17.1 -4.48987 | overlap 3646450 3646451 GTTTTAGAAGCAAAA GGCCCACGGGGGC GTGC ACCACCGTGGGCC CGCCCCCGTGCGAGG TERM 2919 3646491 - 3646450 - T 88 -16.5 -3.2891 | gap 1, opp_overlap 3646485, overlap 3646449 3646451 TTTTAGAAGCAAAAG GCCCACGGGGGCGTGCACCA CCG TGG-GCCCGCCCCCGTGCGA GGGGACGCGCAGCGC TERM 2920 3646490 - 3646451 - T 90 -20 -2.56864 | gap 1, opp_overlap 3646485, overlap 3646449 3646450 TTTAGAAGCAAAAGG CCCACGGGGGCGTGCACCA CCG TGG-GCCCGCCCCCGTGCG AGGGGACGCGCAGCG Ajs_3453 3648588 - 3646507 - | 5'-nucleotidase domain-containing protein TERM 2921 3648704 - 3648724 + r 71 -11.3 -3.53012 | opp_overlap 3648697 3648706 TGCCACAAGCGCCAA TAGCTATTG AAT CAATAGCTA TTTCAACCGCCGCGG Ajs_3454 3649152 - 3648727 - | globin Ajs_3455 3649641 - 3649189 - | TraR/DksA family transcriptional regulator Ajs_3456 3651190 - 3649619 - | hypothetical protein Ajs_3457 3651463 - 3651236 - | hypothetical protein Ajs_3458 3654045 - 3651472 - | hypothetical protein Ajs_3459 3655009 - 3654119 - | formate dehydrogenase, subunit FdhD TERM 2922 3655062 - 3655029 - R 95 -20.3 -3.12999 | gap 1, overlap 3655032 GCAGCGTACACGTAA CGACGCCCCGGCGCGC AGA GCGCGGCGGGGCGT-G CAGGACATAGCGGCC TERM 2923 3655060 - 3655032 - R 100 -23.1 -2.77182 | overlap 3655029 GCGTACACGTAACGA CGCCCCGGCGCGC AGA GCGCGGCGGGGCG TGCAGGACATAGCGG Ajs_3460 3655518 - 3655126 - | hypothetical protein Ajs_3461 3656720 - 3655515 - | formate dehydrogenase gamma subunit Ajs_3462 3656967 - 3656734 - | putative lipoprotein TERM 2924 3656882 - 3656895 + g 74 -5.2 -4.56597 | overlap 3656874 TCGTACTTCACACCG CCGC CGGTCT GCGG TTTTTCGCCGCAGGC Ajs_3463 3657584 - 3656964 - | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein TERM 2925 3657096 - 3657074 - G 70 -13.4 -3.01712 | opp_overlap 3657062 CGCGGGTGCGGAAGA TGTCGGCGAC CAC GTCGCCGTCA CCGGCCAGCAGCGCC Ajs_3464 3660564 - 3657595 - | molybdopterin oxidoreductase Ajs_3465 3660619 - 3660849 + | hypothetical protein TERM 2926 3660857 - 3660837 - T 85 -3.1 -5.28315 | opp_overlap 3660838 3660839, overlap 3660838 3660839 AGAAAACGGAAAAAA TCGCGGCGT ATG AAGCCGCAT TCATACAGTCTATGA Ajs_3466 3661611 - 3660973 - | cytoplasmic chaperone TorD family protein TERM 2927 3661239 - 3661279 + g 77 -7.9 -4.4078 | overlap 3661241 CCTCCGGGGCGGCCA GGCCCAGGCGCTGCAGGTC GGT GCGCAGCCGCGCCAGGGGC TTTTCGTTCAGAAAG TERM 2928 3661489 - 3661435 - G 89 -9.9 -4.56775 | overlap 3661478 AGGCTCCTGCAAAAA GGCGCCGCTGGCGGGCGCCTCG-GTCA CGG CGACGCGCAACGCAT-CCAGCAGCGCC GGATCGGGCGAGGCG Ajs_3467 3663707 - 3661608 - | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein TERM 2929 3662943 - 3662910 - GR 78 -6.6 -4.56597 | gap 1, overlap 3662912 CGCGTGCTGCAAAAA GGTGGGCCCGGCGCC GGCAG GGCG-CAGGTCCAGC ACCAGATCAAAGTCC TERM 2930 3663250 - 3663216 - GR 70 -9.8 -3.62096 | overlap 3663195 3663194 3663217 GCCCAGCACGGGAAA GCGCCGCTCTTGCCGG CCA CCGGCATCACCGGGGC CTTGCGCGAACAGCG Ajs_3468 3664314 - 3663631 - | hypothetical protein Ajs_3469 3664888 - 3664307 - | hypothetical protein TERM 2931 3664751 - 3664699 - G 79 -16.2 -3.01924 | overlap 3664723 CATCGTCGCGGAACA GCTCCACGGCGAAGCCGGGGAACA GCCAG TGCTCCTCGGCCTCGCTCTGGCGC AACAGGCGGGGCGTG Ajs_3470 3667801 - 3664910 - | formate dehydrogenase, alpha subunit Ajs_3471 3669720 - 3667798 - | NADH dehydrogenase (quinone) Ajs_3472 3670097 - 3669717 - | hypothetical protein Ajs_3473 3670584 - 3670072 - | signal peptidase II Ajs_3474 3671484 - 3670588 - | cation efflux system permease, putative Ajs_3475 3671909 - 3671640 - | hypothetical protein Ajs_3476 3673023 - 3671932 - | hypothetical protein TERM 2932 3673073 - 3673092 + r 91 -9.2 -4.46112 | overlap 3673075 TAGCCAAGCGGCCTT GGCACTGG CGCG CCTGTGCC TTTGTTTGCCTACAG Ajs_3477 3673272 - 3673102 - | C4-dicarboxylate transporter/malic acid transport protein Ajs_3478 3674171 - 3673293 - | C4-dicarboxylate transporter/malic acid transport protein TERM 2933 3674124 - 3674164 + g 74 -14.6 -3.01924 | gap 1 GCGCAATCCCCCCTG CCCCGCCGGAGTAGCCAGC TGCG GC-GGCGACCCCGGCGGCG TGTTCAACGCAGCTC Ajs_3479 3675238 - 3674168 - | selenophosphate synthase TERM 2934 3674441 - 3674411 - G 72 -13.2 -3.14132 | GGCGCCGGTCACGAA GCCCGCCGCGGC CAGGTCC GCCACGCCGGGC AGCAGCGGCACGCGC TERM 2935 3675318 - 3675295 - H 78 -3.6 -5.08824 | overlap 3675272 3675296 CCCCGACGCAAAAAA GTGTGCCGCG GGCG CGCCGCGCGC ATCATCCCAGATTCG TERM 2936 3675469 - 3675447 - g 70 -13.4 -3.01712 | CTCGCCCGCCGAATA CGCCGAGGAC CAC ATCCCCGGCG CGATCAACTGCCCGG TERM 2937 3675550 - 3675536 - g 75 -11.4 -3.73775 | TCTACGTGCAGCAAA GCGCCT TCG AGGCGC GCCGCGTGGGCGGAG Ajs_3480 3675295 - 3676416 + | tRNA 2-selenouridine synthase TERM 2938 3676617 - 3676636 + G 72 -11.4 -3.59979 | TCGCAATCCTGCTGC GCTCGCCC TGGT GGGTGAGC TTTGCCATCGCCGCC Ajs_3481 3676583 - 3677152 + | restriction endonuclease TERM 2939 3678229 - 3678280 + F 77 -13 -3.55084 | gap 3, overlap 3678227 CACCCTGCTCAGCGC GCTGGGCGTGCGCGCC-G-ACCGGC CTGAC GCCGGCACCGGCGCGC-TGGCCAGC TATTTGCTGTTCGAG TERM 2940 3678348 - 3678367 + F 73 -10.7 -3.65046 | GGGACGCGCTGGCGC GGCGCAG CGAGAT CTGCGCC TTCTTCGGCTGGCAC metG 3678478 - 3680544 + | methionyl-tRNA synthetase TERM 2941 3680571 - 3680595 + G 100 -13.6 -5.61596 | gap 1 CGGCGATCGCGCCAG CCCCTG-CGCC TTGC GGCGGCAGGGG TTTTTTTGTGCGCCT Ajs_3484 3680544 - 3680870 + | hypothetical protein Ajs_3485 3681956 - 3680919 - | AraC family transcriptional regulator TERM 2942 3683379 - 3683415 + G 72 -13.6 -3.15544 | opp_overlap 3683401 3683402 CCGGCTGCGCACCTG CGCACCCGCGCCGC TGCAACAAC GCGGCGCGGGGCCG TTCATCGCCATCCAG Ajs_3486 3682048 - 3683661 + | fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein TERM 2943 3683703 - 3683720 + G 76 -8.3 -4.20368 | overlap 3683681 TGGCGCCGCCTCGCA GCGCAGC GCCT GCCGCGC TTTCTGTTCGACTAC TERM 2944 3684230 - 3684278 + G 70 -10.7 -3.54424 | CGCGCAGGTGCTGGC GCGCCCCGGCTGGGTGTGGGACG TGG CGCTGCGCGGCCAGCCGCTGCGC TTTGGCAACCTGACC Ajs_3487 3683658 - 3684809 + | FMN-dependent alpha-hydroxy acid dehydrogenase Ajs_3488 3684878 - 3686545 + | hypothetical protein TERM 2945 3686569 - 3686593 + T 100 -20.1 -4.07526 | opp_overlap 3686569 3686573, overlap 3686573 GAGAGCCCCACGCAA GAAAGCCCCGC ACC GCGGGGCTTTC TTTATATGAATGATT TERM 2946 3686593 - 3686569 - T 93 -20.1 -3.06501 | opp_overlap 3686569 3686573, overlap 3686573 GAGAGCCCCACGCAA GAAAGCCCCGC ACC GCGGGGCTTTC TTTATATGAATGATT TERM 2947 3686589 - 3686573 - T 100 -15.1 -4.20516 | opp_overlap 3686569 3686573, overlap 3686569 GCCCCACGCAAGAAA GCCCCGC ACC GCGGGGC TTTCTTTATATGAAT TERM 2948 3686573 - 3686589 + T 100 -15.1 -4.63044 | opp_overlap 3686573 3686569, overlap 3686569 GCCCCACGCAAGAAA GCCCCGC ACC GCGGGGC TTTCTTTATATGAAT TERM 2949 3686636 - 3686648 + T 73 -3.3 -4.8048 | opp_overlap 3686634 GCTTGCCAGACAAGC GAGAG CAG CTCAC TTTTTCATATCAACG Ajs_3489 3687353 - 3686667 - | hypothetical protein TERM 2950 3686872 - 3686852 - G 70 -11.1 -3.53012 | overlap 3686861 GCTGCTGCGCGTAAA GCGACACGA TGG TCGCGCCGC CCAGGCTGGACTGGT Ajs_3490 3688003 - 3687503 - | putative lipoprotein Ajs_3491 3688148 - 3688351 + | hypothetical protein Ajs_3492 3688427 - 3689287 + | condensin subunit ScpA TERM 2951 3690249 - 3690230 - g 74 -2.1 -4.8048 | CTTCGAGATGAAAAA GCACG GCCTGGACTG CGTGC ACCTGGACATCTCGC Ajs_3493 3689337 - 3690926 + | L-aspartate oxidase Ajs_3494 3690954 - 3691334 + | aspartate alpha-decarboxylase Ajs_3495 3691365 - 3691727 + | 5-carboxymethyl-2-hydroxymuconate isomerase TERM 2952 3691788 - 3691755 - T 82 -3.1 -5.15969 | gap 1, overlap 3691759 CCGGAACGTAAAAAA GAAACCGCTGTG-CTC TGA GAGTCATAGCGGTTGG GGTGCCCGCCCGGCC TERM 2953 3691784 - 3691759 - T 93 -8.3 -5.08015 | gap 1, overlap 3691755 AACGTAAAAAAGAAA CCGCTGTG-CTC TGA GAGTCATAGCGG TTGGGGTGCCCGCCC Ajs_3496 3693866 - 3692067 - | para-aminobenzoate synthase, subunit I TERM 2954 3693024 - 3692987 - G 70 -12 -3.41341 | gap 2, opp_overlap 3693006, overlap 3692985 AACCGCAGGGAAACA GCGCGCCGAACACGTCGG CCAG CCG-CGTG-CCGGTGCGC GTGCGCGCCACCACG Ajs_3497 3695060 - 3693936 - | quinolinate synthetase Ajs_3498 3696063 - 3695140 - | nicotinate-nucleotide pyrophosphorylase [carboxylating] TERM 2955 3695455 - 3695494 + g 72 -4.8 -4.45544 | opp_overlap 3695425 3695429, overlap 3695470 CACCGCCTGGGCGGC CCGCAGCACCGCCGTC ACGCCGCC GGCGGCAGCGATGTGG TTTTCCTTGATGAGC Ajs_3499 3696084 - 3696965 + | 3-methyl-2-oxobutanoate hydroxymethyltransferase TERM 2956 3697139 - 3697153 + G 100 -10 -4.82901 | GGCCGCTGGGCGACG TGCTGG TCG CCAGCA TTTTTGTGAACCGCC Ajs_3500 3696982 - 3697851 + | pantothenate synthetase TERM 2957 3698109 - 3698138 + T 81 -15.1 -3.01924 | opp_overlap 3698116, overlap 3698116 CCTGAACCGCGCACG ACAAAAAGCGGCC TGCG GGCCGCTTTTTGC TGTTCACGGGAGATG TERM 2958 3698131 - 3698116 - T 100 -11.8 -4.91109 | opp_overlap 3698109 3698116 CGCGCACGACAAAAA GCGGCC TGCG GGCCGC TTTTTGCTGTTCACG TERM 2959 3698116 - 3698131 + T 100 -11.8 -4.87626 | opp_overlap 3698116, overlap 3698109 CGCGCACGACAAAAA GCGGCC TGCG GGCCGC TTTTTGCTGTTCACG Ajs_3501 3699154 - 3698162 - | glycerol-3-phosphate dehydrogenase (NAD(P)(+)) Ajs_3502 3699679 - 3699227 - | preprotein translocase subunit SecB TERM 2960 3699738 - 3699709 - R 100 -17.9 -4.64861 | gap 1 TTCGGTCAAAACAAA GCCCGCC-CGGGAG AGG CTCCCGCAGCGGGC AACATGGGGCGCATT Ajs_3503 3700038 - 3699781 - | glutaredoxin 3 Ajs_3504 3700495 - 3700088 - | rhodanese domain-containing protein Ajs_3505 3700569 - 3701312 + | phosphoglycerate mutase TERM 2961 3701380 - 3701355 - f 91 -9.7 -4.56597 | overlap 3701357 3701374 GTCTTGCTTGAAAAA TAGGCAGATCC TGAA GGAACTGCCCA GGCCGCAGCCCTTCC TERM 2962 3701378 - 3701357 - f 76 -10.1 -3.90048 | overlap 3701355 3701374 CTTGCTTGAAAAATA GGCAGATCC TGAA GGAACTGCC CAGGCCGCAGCCCTT TERM 2963 3702646 - 3702627 - g 78 -6.4 -4.59773 | gap 1, overlap 3702629 GCCGACCTGGAAAAA CACCTGACC AGC GGCCAGG-G CGAGGAAGCGAAGGA TERM 2964 3702645 - 3702629 - g 77 -10.1 -3.91506 | overlap 3702627 CGACCTGGAAAAACA CCTGACC AGC GGCCAGG GCGAGGAAGCGAAGG Ajs_3506 3701427 - 3702863 + | C-terminal processing peptidase-3 TERM 2965 3702885 - 3702910 + F 100 -16.9 -4.56597 | gap 1, opp_overlap 3702885 CTTTCTTGGCAACCA GGCCGGGACTCC CGC GGAG-CCCGGCC TTTTTCACGCCCACC TERM 2966 3702910 - 3702885 - f 84 -16.9 -2.70932 | gap 1, opp_overlap 3702885 CTTTCTTGGCAACCA GGCCGGGACTCC CGC GGAG-CCCGGCC TTTTTCACGCCCACC TERM 2967 3703029 - 3703065 + G 74 -9.9 -3.89346 | overlap 3703032 AGCCCACGTACTCGT CATCGGTGCCGGCGGTC TGG GCTCGCCGGCCGCGCTG TTTCTCGGCTCCGCA Ajs_3507 3702931 - 3703695 + | UBA/THIF-type NAD/FAD binding protein TERM 2968 3703758 - 3703773 + F 75 -3.2 -4.8622 | CCTGTTTTCATACAG TAGCGC CGAT GCCCTA TTTTTCGTTCCCGGC Ajs_3508 3703804 - 3704214 + | response regulator receiver protein TERM 2969 3704275 - 3704325 + T 100 -32.2 -3.76952 | opp_overlap 3704284, overlap 3704276 3704284 CTTACTCTCAAACCT CTGCACAAAGCACAAGGGCCAGTC AGT GACTGGCCCTTGTGCTTTGTGCGC TTTGCGTTCAATCGA TERM 2970 3704276 - 3704324 + T 100 -35.7 -2.8585 | opp_overlap 3704284, overlap 3704275 3704284 TTACTCTCAAACCTC TGCACAAAGCACAAGGGCCAGTC AGT GACTGGCCCTTGTGCTTTGTGCG CTTTGCGTTCAATCG TERM 2971 3704316 - 3704284 - T 100 -26.5 -3.8709 | opp_overlap 3704284 3704276 3704275 AAACCTCTGCACAAA GCACAAGGGCCAGTC AGT GACTGGCCCTTGTGC TTTGTGCGCTTTGCG TERM 2972 3704284 - 3704316 + T 100 -26.5 -3.95219 | opp_overlap 3704284, overlap 3704276 3704275 AAACCTCTGCACAAA GCACAAGGGCCAGTC AGT GACTGGCCCTTGTGC TTTGTGCGCTTTGCG Ajs_3509 3705052 - 3704333 - | two component LuxR family transcriptional regulator TERM 2973 3705663 - 3705706 + G 70 -11.6 -3.39803 | gap 1 ATTCGCTGATGCTCT CGCGCATCGGCATCGCCGCCG TGG CGGTGGTGGGGCTGCTG-GCG TTCTACCTGTACCTG Ajs_3510 3705119 - 3706462 + | multi-sensor signal transduction histidine kinase Ajs_3511 3706628 - 3706792 + | hypothetical protein Ajs_3512 3706848 - 3707240 + | hypothetical protein Ajs_3513 3707263 - 3707808 + | Ferritin, Dps family protein Ajs_3514 3707908 - 3708222 + | transport-associated TERM 2974 3708261 - 3708243 - f 89 -17.4 -3.1505 | opp_overlap 3708243, overlap 3708232 ACGACTGCGCAGGAA CGCCGCCC TCT GGGCGGCG TTTTTTTTCACTGGC TERM 2975 3708243 - 3708261 + F 100 -17.4 -5.81412 | opp_overlap 3708232 3708243 ACGACTGCGCAGGAA CGCCGCCC TCT GGGCGGCG TTTTTTTTCACTGGC TERM 2976 3709249 - 3709259 + G 76 -8.2 -4.2717 | GACCCGTTTGCACAG CCGG CGC CCGG TTTTGATGCCATGGT Ajs_3515 3708313 - 3709413 + | hypothetical protein Ajs_3516 3709911 - 3709414 - | pantetheine-phosphate adenylyltransferase Ajs_3517 3710680 - 3710057 - | putative methyltransferase Ajs_3518 3712059 - 3710677 - | peptidase M16 domain-containing protein Ajs_3519 3713529 - 3712075 - | peptidase M16 domain-containing protein Ajs_3520 3713559 - 3714707 + | signal recognition particle-docking protein FtsY Ajs_3521 3715120 - 3714758 - | CutA1 divalent ion tolerance protein TERM 2977 3715347 - 3715368 + G 72 -15.1 -2.71364 | overlap 3715364 TCCGTGACGACCCTC GCGCCCGCG AACC CGTGGGCGC TGGTTCCCCCGCTGG TERM 2978 3716259 - 3716216 - g 77 -3.8 -4.72272 | gap 1, overlap 3716218 3716222 3716225 3716240 GGCCGCCATGAAAAA GATGAA-GAAGGCCCTGGC CGAATAC GCCTGAGCCTTCGCCCAGC AGCCCGGATCGCGGG Ajs_3522 3715281 - 3716246 + | RNA polymerase, sigma 32 subunit, RpoH TERM 2979 3716252 - 3716222 - f 70 -10.4 -3.62531 | overlap 3716218 3716216 3716225 3716240 CATGAAAAAGATGAA GAAGGCCCTGGC CGAATAC GCCTGAGCCTTC GCCCAGCAGCCCGGA TERM 2980 3716286 - 3716313 + F 100 -14.1 -5.27335 | opp_overlap 3716283 3716282 3716286, overlap 3716289 CGGGCAGATAATCCA GGCGCGCAGCC CTCACC GGCTACGCGCC TTTTTCTTTGCCGGC TERM 2981 3716313 - 3716286 - f 80 -16.3 -2.63079 | opp_overlap 3716286 3716289, overlap 3716283 3716282 CGGGCAGATAATCCA GGCGCGCAGCC CTCACC GGCTACGCGCC TTTTTCTTTGCCGGC TERM 2982 3717071 - 3717014 - g 78 -14 -3.57144 | gap 2, overlap 3717015 GTGGCCAGTTGCAAA TGGCGCTGCT-GC-CGCCCGCGCTCGCG CAGG CCCAGGCACGGGCGAGCAAGCTGCGCCT GATCGGCGTGACCTC TERM 2983 3717070 - 3717015 - g 80 -17.5 -2.74144 | gap 2, overlap 3717014 TGGCCAGTTGCAAAT GGCGCTGCT-GC-CGCCCGCGCTCGCG CAGG CCCAGGCACGGGCGAGCAAGCTGCGCC TGATCGGCGTGACCT Ajs_3523 3716374 - 3717384 + | hypothetical protein Ajs_3524 3717613 - 3718395 + | cyclic nucleotide-binding protein Ajs_3525 3720240 - 3718417 - | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) TERM 2984 3719656 - 3719714 + g 79 -16.2 -2.80935 | gap 3 CGCTCCCGCCTGCTC CGC-GATCG-CCTGTTCCAGCCGCTGGCC GAAC GTCCAGCGGTTG-AGCAGGCCGGTCAGCG TGTCGTGCGTGGCCT Ajs_3526 3721067 - 3720456 - | electron transport protein SCO1/SenC Ajs_3527 3721997 - 3721077 - | protoheme IX farnesyltransferase Ajs_3528 3723184 - 3721994 - | cytochrome oxidase assembly TERM 2985 3722245 - 3722227 - G 72 -13.8 -3.01712 | CCGGGTCGCGCAACA CGCCCGCG CGG CGCAGGCG CCAGGCCAGCACCAC Ajs_3529 3723939 - 3723190 - | hypothetical protein Ajs_3530 3724657 - 3723881 - | putative transmembrane cytochrome oxidase TERM 2986 3724358 - 3724343 - GH 76 -2.4 -4.87626 | opp_overlap 3724350 CGTGAACACGAAAAA GCCCGG ACGC CCGTAC ATCTGGCGGTTCTCC Ajs_3531 3724664 - 3724897 + | putative transmembrane protein TERM 2987 3724994 - 3725006 + T 74 -4.8 -4.56597 | CTTATCTATCAAGCG CAGG CAGCT CCTG TTTTTGAAGCAACCA TERM 2988 3725038 - 3725051 + T 91 -9.5 -4.59773 | opp_overlap 3725038 CTCCGCGTAAAAAAA GCGCC TTGC GGCGC TTTTTCCCGATCCGG TERM 2989 3725051 - 3725038 - T 100 -9.5 -5.40072 | opp_overlap 3725038 CTCCGCGTAAAAAAA GCGCC TTGC GGCGC TTTTTCCCGATCCGG Ajs_3532 3725956 - 3725075 - | cytochrome c oxidase, subunit III TERM 2990 3725897 - 3725876 - G 70 -6.5 -4.17309 | gap 1, overlap 3725877 GAGGACAAAGAACAA CCCCGCCGCC GCC AGCA-CGGGG TGGCGAGACTCCGCG Ajs_3533 3726224 - 3726015 - | hypothetical protein Ajs_3534 3726841 - 3726221 - | cytochrome C oxidase assembly protein Ajs_3535 3726967 - 3726857 - | hypothetical protein Ajs_3536 3728619 - 3726985 - | cytochrome-c oxidase Ajs_3537 3729821 - 3728652 - | cytochrome c oxidase, subunit II TERM 2991 3730112 - 3730075 - g 84 -14.1 -3.93583 | GAAGTGACGCAGAAA GGAGGCCTGAGAGCGCC GCGT GGCGCCATCAGAACTCC AGAAGACGCGACGCC Ajs_3538 3729913 - 3730206 + | hypothetical protein Ajs_3539 3731153 - 3730245 - | biotin synthesis protein BioC Ajs_3540 3731189 - 3731917 + | ComF family protein Ajs_3541 3731927 - 3732496 + | tRNA/rRNA methyltransferase (SpoU) Ajs_3542 3732990 - 3732526 - | dehydratase Ajs_3543 3733693 - 3733073 - | cobyrinic acid a,c-diamide synthase TERM 2992 3733796 - 3733781 - R 81 -3.9 -4.96646 | overlap 3733783 3733784 CCACATAAGCAAAAA CAGGC CTTAGC GCCCG ACCATCAAGCGCCAA Ajs_3544 3734479 - 3733841 - | lysine exporter protein LysE/YggA TERM 2993 3736642 - 3736678 + G 71 -15.2 -2.64616 | opp_overlap 3736627 3736642 3736675, overlap 3736644 GGCTCCATAACAAAA GAGCCTGTAGCGCCTG TCCAT CAAGCGCTACAAGCTC TCGTATCAATAGCAG TERM 2994 3736678 - 3736642 - g 100 -19.6 -4.77165 | opp_overlap 3736642 3736644, overlap 3736627 3736675 GGCTCCATAACAAAA GAGCCTGTAGCGCCTG TCCAT CAAGCGCTACAAGCTC TCGTATCAATAGCAG TERM 2995 3736738 - 3736698 - g 72 -14.8 -2.705 | overlap 3736688 3736690 ATCAATAGCAGATTA CCGCT-ACCCCTCCACCCGC CGT GTGAG-GGAGGGGTAAGCGG CTGAACCGCTCAGCG Ajs_3545 3734767 - 3736734 + | potassium efflux system protein Ajs_3546 3737751 - 3736759 - | hypothetical protein TERM 2996 3737264 - 3737223 - G 70 -12.9 -3.02144 | gap 1, opp_overlap 3737217 TCATGCTCTTGAAGA GCTCGCCCGATACGTGGGGC GAC GCGCCGC-TGCCGGGCGAGC CAAACGTGATCTTGC TERM 2997 3737518 - 3737530 + g 74 -10.5 -3.78934 | TCCGCCAATGTTGCC GCCCG CTC CGGGC TTGTTGTCCACCACG Ajs_3547 3738640 - 3737840 - | 3-oxoadipate enol-lactonase Ajs_3548 3739879 - 3738668 - | beta-ketoadipyl CoA thiolase TERM 2998 3739277 - 3739298 + g 70 -10.1 -3.68988 | CTTGGCCAGGTAGCC GGCGGCC ATCGCGGC GGCCGCC TTCTGTTGGCTGGCC TERM 2999 3739946 - 3739907 - R 85 -3.5 -5.27779 | gap 1, opp_overlap 3739908 3739910 3739911, overlap 3739908 3739911 GGGAATATCAAAAAA GTGAGCTGCCAGCGCTTG TCCAT CAAGCGCTGG-AGGCCGT TTTGGTACTTATTGC TERM 3000 3739908 - 3739945 + r 95 -10.6 -4.39133 | gap 1, opp_overlap 3739907 3739908 3739911, overlap 3739910 3739911 GGAATATCAAAAAAG TGAGCTGCCAGCGCTTG TCCAT CAAGCGCTGGAGGC-CG TTTTGGTACTTATTG TERM 3001 3739910 - 3739944 + r 70 -12.1 -3.22396 | opp_overlap 3739908 3739907 3739911, overlap 3739908 3739911 AATATCAAAAAAGTG AGCTGCCAGCGCTTG TCCAT CAAGCGCTGGAGGCC GTTTTGGTACTTATT TERM 3002 3739911 - 3739943 + r 76 -15.6 -2.52353 | opp_overlap 3739908 3739907 3739911, overlap 3739910 3739908 ATATCAAAAAAGTGA GCTGCCAGCGCTTG TCCAT CAAGCGCTGGAGGC CGTTTTGGTACTTAT TERM 3003 3739943 - 3739911 - R 74 -13.4 -2.949 | opp_overlap 3739911 3739910 3739908, overlap 3739908 3739907 ATATCAAAAAAGTGA GCTGCCAGCGCTTG TCCAT CAAGCGCTGGAGGC CGTTTTGGTACTTAT Ajs_3549 3740608 - 3739955 - | butyryl-CoA:acetate CoA transferase Ajs_3550 3741331 - 3740636 - | 3-oxoacid CoA-transferase, A subunit TERM 3004 3740992 - 3740975 - G 83 -14.1 -3.78934 | CGTGGGGCAGAAGAA GGCGCCG ATGC CGGCGCC CGCGGCGCGCATGCG TERM 3005 3741157 - 3741170 + g 73 -9.5 -3.9461 | overlap 3741149 CGGCCAGGCCGGCAT CGCCG TTGC CGGCG TTGTTGTTGACCACG TERM 3006 3741620 - 3741576 - g 70 -13.3 -3.06501 | opp_overlap 3741576 3741578 CAGACCCTGAGCGAA GTCGCGGCACGCACCGGCCTG ACG CGCGCAGGCGCGCGCCGCATC TTGCTGACGCTGCAG Ajs_3551 3741447 - 3742250 + | IclR family transcriptional regulator TERM 3007 3742424 - 3742450 + F 79 -10.9 -3.95584 | gap 2, opp_overlap 3742423 3742422 CCTTCACCGACAACT CCA-GC-GGCCCG ATG CGGGCCTGCGTGG TTTCCTTGGTGAAGC Ajs_3553 3742668 - 3743123 + | hypothetical protein Ajs_3554 3743986 - 3743084 - | UspA domain-containing protein TERM 3008 3744047 - 3744031 - R 71 -5.8 -4.386 | gap 1, overlap 3744019 CAACGGCGCACAAAA GCGACCG TCAG CGG-CGC GTCATCGGCGGGAAG TERM 3009 3744424 - 3744411 - R 100 -9.5 -5.40072 | opp_overlap 3744411 3744410 CCGGGCGTAAAAAAA CCCGC GTTG GCGGG CTTCTTCGGGTGCGT Ajs_3555 3745106 - 3744447 - | cytochrome c, class I TERM 3010 3745073 - 3745054 - G 72 -5.6 -4.42386 | overlap 3745055 TCGGCATGGAGAAAA CCGGTCGC ACAA GCGACAGA CAGGCCGAATATCGT Ajs_3556 3745215 - 3746057 + | ATPase central domain-containing protein Ajs_3557 3746071 - 3746298 + | hypothetical protein Ajs_3558 3746316 - 3746918 + | GCN5-related N-acetyltransferase Ajs_3559 3746937 - 3748124 + | hypothetical protein TERM 3011 3748144 - 3748174 + G 79 -11.1 -3.99324 | gap 1, opp_overlap 3748143, overlap 3748145 3748146 3748149 CATGACCAAGCCAAG C-TCAGCGCCGGCC CGGT GGCCGGCGTTGCTG TTTCTGCTGATCGGC TERM 3012 3748145 - 3748172 + G 81 -14.8 -3.58864 | opp_overlap 3748143, overlap 3748144 3748146 3748149 ATGACCAAGCCAAGC TCAGCGCCGGCC CGGT GGCCGGCGTTGC TGTTTCTGCTGATCG TERM 3013 3748146 - 3748171 + G 85 -18.3 -2.74836 | opp_overlap 3748143, overlap 3748145 3748144 3748149 TGACCAAGCCAAGCT CAGCGCCGGCC CGGT GGCCGGCGTTG CTGTTTCTGCTGATC TERM 3014 3748149 - 3748168 + G 86 -16.4 -3.51406 | opp_overlap 3748143, overlap 3748146 3748145 3748144 CCAAGCCAAGCTCAG CGCCGGCC CGGT GGCCGGCG TTGCTGTTTCTGCTG TERM 3015 3748921 - 3748888 - g 80 -14.5 -3.41051 | gap 1 CGAGCGTTACGACAA CGAGGGCATGCGCCGC ATT GCG-CGCCTGCCCACG GGCGACGACTACAGT TERM 3016 3749976 - 3749946 - g 81 -14.6 -3.53012 | GCCTGCGCTGGCAAA GCCCGGTGGGCCCG CTG CAGGCCGACCTGGC CTATGGCCTGCACAC Ajs_3560 3748130 - 3750034 + | surface antigen (D15) TERM 3017 3753694 - 3753637 - g 71 -14 -2.82834 | CACGGCATCACCACA CGCCTGACGGGGCAGCTGGACAT-CCGC AGCA GCGGCACGGCCGGC-GCCCCGCCGCGCG TGACCGGCGAGGTGC Ajs_3561 3750142 - 3754284 + | hypothetical protein TERM 3018 3754374 - 3754356 - T 95 -10.2 -4.44284 | AACTCAATAGCAAAA GGGCGGCA TGG CACCGCCC TTACAATCTTGCCTC Ajs_3562 3754855 - 3754493 - | hypothetical protein TERM 3019 3754672 - 3754619 - G 81 -12.4 -3.86015 | gap 3, overlap 3754622 CAGGGTGCCCACAAA GACGC--CCACCGGCCCCGCCGT-GGC AGC GCCTACGGCCGCGCCGGCAGCTGCGCC CGCCATCGCGCCGCC Ajs_3563 3756549 - 3755146 - | cardiolipin synthetase 2 TERM 3020 3756638 - 3756659 + r 76 -11.5 -3.79906 | CAGCGACCGCATGCA TGGGCCCCG CATG CGGGGCGCA TTCTTCTGGCGGTAC Ajs_3564 3757257 - 3756880 - | arsenate reductase Ajs_3565 3758963 - 3757305 - | binding-protein-dependent transport systems inner membrane component TERM 3021 3759420 - 3759455 + G 72 -11.8 -3.54424 | ATGCCCCCCGAGCAG CGGCGCATGGGCATGG TGTT CCAGGACTATGCGCTG TTTCCGCACCTCAGC Ajs_3566 3759183 - 3760259 + | ABC transporter related Ajs_3567 3761529 - 3760303 - | hypothetical protein Ajs_3568 3762400 - 3761660 - | lyso-ornithine lipid acyltransferase Ajs_3569 3763715 - 3762420 - | dihydroorotase pyrB 3764890 - 3763928 - | aspartate carbamoyltransferase catalytic subunit Ajs_3571 3765426 - 3764893 - | phosphoribosyltransferase Ajs_3572 3765842 - 3765423 - | Holliday junction resolvase YqgF Ajs_3573 3766438 - 3765839 - | hypothetical protein TERM 3022 3766544 - 3766506 - R 100 -15.9 -4.52589 | overlap 3766511 CCCCGGCACACAAAA GACAAGGCCCGGCAGGC GTGCA GCCTGCCGGGCCTGGGT GACACTGGACTGCGT TERM 3023 3766539 - 3766511 - R 100 -23.2 -4.05861 | overlap 3766506 GCACACAAAAGACAA GGCCCGGCAGGC GTGCA GCCTGCCGGGCC TGGGTGACACTGGAC Ajs_3574 3772645 - 3766565 - | CheA signal transduction histidine kinases TERM 3024 3767032 - 3767053 + g 73 -13.7 -3.15544 | CTTGGTCCACCGCCG GTGCGTGCG TGGC CGCGCGCAC TTGGTCGCCGTACAC Ajs_3575 3774956 - 3772692 - | methyl-accepting chemotaxis sensory transducer TERM 3025 3773048 - 3773084 + g 72 -11.6 -3.61398 | gap 1 GCGCCGAGATCTGGC GCGTGGCGTCT-GCGGA GCGT TCCGCGAGACGCTGCAC TTCTTCCGCCACCAC TERM 3026 3773285 - 3773295 + g 72 -8.2 -4.08216 | GGATGGCGTTCATAC CGCC GAT GGCG TTTTGCACGGCCTGC Ajs_3576 3775505 - 3774978 - | putative CheW protein Ajs_3577 3775887 - 3775522 - | response regulator receiver protein TERM 3027 3775937 - 3775917 - R 70 -9.8 -3.57144 | opp_overlap 3775916 3775913 TTGGGCATTTCCAAA TTGCTGCA CAGCC TGCAGCAA CTGGTCTTTGGTAAA Ajs_3578 3776291 - 3775899 - | response regulator receiver protein TERM 3028 3776340 - 3776324 - R 80 -5.8 -4.72473 | gap 1 GGAACGAAAAAACAA CGCTGGC AGGA GCC-GCG CCTCAAATCTCGACC Ajs_3579 3776495 - 3776343 - | rubredoxin-type Fe(Cys)4 protein Ajs_3580 3776611 - 3777555 + | phosphomethylpyrimidine kinase type-1 TERM 3029 3778249 - 3778276 + G 72 -11.4 -3.60296 | gap 1 GCAGCACGGCGCGTT GCTGGTCATCGAC GAG GTC-ATGACCGGC TTTCGCGTGGCGCTG Ajs_3581 3777539 - 3778843 + | glutamate-1-semialdehyde 2,1-aminomutase TERM 3030 3779496 - 3779529 + G 72 -7.3 -4.25104 | CACCCGCACCCTGCC CACGGGCAGCGTGGC GCAG GTGAAGCTGGCCGTG TTTTCGTGCGCCAAC Ajs_3582 3778933 - 3780786 + | alkaline phosphatase Ajs_3583 3781341 - 3780880 - | cytochrome c, class I TERM 3031 3781307 - 3781264 - G 80 -15.3 -3.23692 | gap 2, opp_overlap 3781264 3781266 CACCAGCACCATGAA CACCACCAGCACCCAGCCCAG CCAG CGGGGCCGGG-GC-GGCGGTG TGTCGTCGTGCAGCG Ajs_3584 3782962 - 3781361 - | bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase TERM 3032 3782994 - 3783025 + r 71 -9.5 -3.68435 | gap 1, overlap 3782992 TTTTGATGAAATCGG GCTG-TAGCGCTTG ATGGA CAAGCGCCACCAGC TATTCTTTTAGAAGC Ajs_3585 3783278 - 3783045 - | DNA-binding protein Fis Ajs_3586 3784320 - 3783259 - | nifR3 family TIM-barrel protein TERM 3033 3783661 - 3783687 + g 71 -9.4 -3.85817 | gap 1, overlap 3783676 CATGACCGCGTCGGC GCCTGTGGCGG CCAGCA CCGCC-CGGGC TTTCTCGGGCGACGT Ajs_3587 3784415 - 3785023 + | hypothetical protein Ajs_3588 3786536 - 3785361 - | HipA domain-containing protein Ajs_3589 3786892 - 3786581 - | helix-turn-helix domain-containing protein Ajs_3590 3787276 - 3787037 - | XRE family transcriptional regulator Ajs_3591 3787420 - 3788085 + | hypothetical protein Ajs_3592 3788103 - 3788831 + | hypothetical protein Ajs_3593 3789633 - 3788896 - | IstB ATP binding domain-containing protein TERM 3034 3789490 - 3789519 + g 77 -13.5 -3.61398 | overlap 3789511 GCTGTCACGCCAGTC CACCTCGCGCTGC ACCA GCAGCGCCAGGCG TTGTTCAAAGGGCAG Ajs_3594 3791214 - 3789670 - | integrase catalytic subunit TERM 3035 3790633 - 3790651 + g 70 -11.7 -3.35996 | opp_overlap 3790629 CGCGCTAATGATGCT GGCCACC CAGTC GGTGGCC TTCTGGCTGGCGGTG Ajs_3595 3791300 - 3791821 + | hypothetical protein Ajs_3596 3791818 - 3792294 + | hypothetical protein Ajs_3597 3792281 - 3792562 + | hypothetical protein Ajs_3598 3794117 - 3792543 - | ATPase central domain-containing protein TERM 3036 3792757 - 3792793 + g 71 -12.3 -3.34043 | overlap 3792753 3792752 3792758 3792760 GTGCCCCAGCTCGAC TCGTCGCGGAGTCGGTT GTA AATCGACTGCGCGATGC TTCTGACCTGCTCCG TERM 3037 3792758 - 3792792 + g 74 -15.8 -2.60212 | overlap 3792753 3792752 3792757 3792760 TGCCCCAGCTCGACT CGTCGCGGAGTCGGTT GTA AATCGACTGCGCGATG CTTCTGACCTGCTCC TERM 3038 3792760 - 3792790 + g 73 -14.8 -2.84 | overlap 3792753 3792752 3792758 3792757 CCCCAGCTCGACTCG TCGCGGAGTCGGTT GTA AATCGACTGCGCGA TGCTTCTGACCTGCT Ajs_3599 3795806 - 3794943 - | hypothetical protein Ajs_3600 3798562 - 3795809 - | hypothetical protein TERM 3039 3796888 - 3796928 + g 72 -8.5 -4.09243 | gap 4, overlap 3796908 CCAATGCGCGGTGCC GCTCTGCCGA-CT--GCGCCA GAC TGGCGCTGAGGTCGGC-GAGC TTTTGCGCCAGTGTC Ajs_3601 3799176 - 3798562 - | hypothetical protein TERM 3040 3798997 - 3798979 - G 70 -10.2 -3.74224 | overlap 3798970 GTGAAACCAGGCAAA GCCCCTGG CAT CCAGGCGC AGCTCGAACCCCAGC Ajs_3602 3800432 - 3799173 - | hypothetical protein Ajs_3603 3802558 - 3800846 - | hypothetical protein TERM 3041 3801659 - 3801648 - G 75 -7.2 -4.38712 | CCGACGGTCAGAAAA CGGG ATTG CCCG GTGGCAAAGGCCATC Ajs_3604 3803850 - 3802582 - | putative transcriptional regulator TERM 3042 3803449 - 3803477 + g 72 -5.1 -4.36914 | TTCACGCTTGGCGCT GCCCACGCGGT GCAAATA GCCGCCGGGGC TTTTATGCACGAACA Ajs_3605 3806719 - 3803852 - | SMC domain-containing protein TERM 3043 3804217 - 3804176 - G 73 -14.3 -3.21099 | gap 1 GTGCGCCAGCAGGAA GGCCAGCATGGCCGCCGCGC GCT GCCCGGCGGACGC-CTGGCC GATGGACTGAAAGTC Ajs_3606 3809732 - 3806730 - | HsdR family type I site-specific deoxyribonuclease Ajs_3607 3810922 - 3809732 - | restriction modification system, type I Ajs_3608 3812801 - 3810915 - | putative transcriptional regulator Ajs_3609 3814320 - 3812794 - | N-6 DNA methylase TERM 3044 3813891 - 3813916 + g 70 -2.6 -4.64657 | gap 1, overlap 3813892 TGGCCACCGAGAGTG TCTGCGTCGAG AAGTG CTCGAT-CAGG TTTTTCAGCGTTTCA Ajs_3610 3815819 - 3814317 - | N-6 DNA methylase TERM 3045 3814725 - 3814707 - G 81 -11 -4.07568 | GCCGGTGCCGTAAAA CAGGTTGG GCG CCAACCCG ATTACGGCCTCGACC Ajs_3611 3816013 - 3815816 - | hypothetical protein Ajs_3612 3816267 - 3816001 - | hypothetical protein Ajs_3613 3817368 - 3816280 - | transposase, IS4 family protein Ajs_3614 3818466 - 3817399 - | phage integrase family protein Ajs_3615 3819365 - 3818463 - | hypothetical protein TERM 3046 3819025 - 3818968 - G 93 -19.7 -2.65815 | opp_overlap 3818977 3818993 3818994 3819006 CCTACACCTATATCA CCGCCCTGACCGGCGACGGATGCGCCG TCCA CGGTTTCTCCGTCGCCGGCCAAGCCGG CCATGGATGTCTGTG TERM 3047 3819006 - 3819032 + g 72 -14.4 -2.99319 | opp_overlap 3818968, overlap 3818994 3818993 GCCGTCCACGGTTTC TCCGTCGCCGGC CAA GCCGGCCATGGA TGTCTGTGGCACCTT Ajs_3616 3820508 - 3819720 - | hypothetical protein Ajs_3617 3821677 - 3820505 - | phage integrase family protein TERM 3048 3821806 - 3821841 + r 71 -13.4 -2.53022 | opp_overlap 3821808 3821811 3821816, overlap 3821816 GAAGCAGCGCTATGA AACAATAAAACCGCGC AACT GCGCGGTTTTATTGGG GGTTTTCATGCTTTC TERM 3049 3821839 - 3821808 - R 100 -20.4 -3.73953 | opp_overlap 3821806 3821816, overlap 3821811 3821816 AGCAGCGCTATGAAA CAATAAAACCGCGC AACT GCGCGGTTTTATTG GGGGTTTTCATGCTT TERM 3050 3821836 - 3821811 - R 100 -16.3 -4.0031 | opp_overlap 3821806 3821816, overlap 3821808 3821816 AGCGCTATGAAACAA TAAAACCGCGC AACT GCGCGGTTTTA TTGGGGGTTTTCATG TERM 3051 3821816 - 3821831 + r 100 -11.8 -4.6635 | opp_overlap 3821811 3821808 3821816, overlap 3821806 TATGAAACAATAAAA CCGCGC AACT GCGCGG TTTTATTGGGGGTTT TERM 3052 3821831 - 3821816 - R 100 -11.8 -5.02606 | opp_overlap 3821816 3821806, overlap 3821811 3821808 TATGAAACAATAAAA CCGCGC AACT GCGCGG TTTTATTGGGGGTTT Ajs_3618 3822990 - 3821896 - | GTP-binding protein YchF TERM 3053 3823082 - 3823054 - R 75 -13.7 -3.07816 | GGGGTATGCAGCGAA GCGCGCGCGGGCC AAT GCCCCGCAGGCGC TCCCCTCGCCGGGCG Ajs_3619 3823984 - 3823115 - | MOSC domain-containing protein Ajs_3620 3824086 - 3825225 + | 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase Ajs_3621 3825269 - 3825979 + | thiol:disulfide interchange protein DsbC TERM 3054 3826240 - 3826274 + G 77 -16.5 -2.52464 | gap 1 CGCTCACCGTGGCGG TACCGGCGGCG-CAGC AGGA GCTGTCGCTGCCGGTG TGGATTCCGGGCAGC TERM 3055 3826332 - 3826316 - g 74 -12.3 -3.62046 | overlap 3826317 CGAGTTCTCCAAGAA CCTGCAG TCG CTGCAGG CGCAGCAGGGCGGCG TERM 3056 3826456 - 3826484 + G 72 -11.6 -3.61398 | ACGACACCTCGGTGC GCACCGCCTGGC TGGAC GCCATGCGGGGC TTCTTCAACGGCACC TERM 3057 3827722 - 3827704 - g 72 -11.6 -3.53012 | overlap 3827688 GGCTGGCGCTGGAAA CGCCGGGC CAG GCCTGGCG CCTGCACAAGTTGGA Ajs_3622 3826146 - 3827927 + | peptidase M61 domain-containing protein Ajs_3623 3827924 - 3828757 + | short chain enoyl-CoA hydratase TERM 3058 3828868 - 3828892 + F 100 -19.3 -5.27335 | opp_overlap 3828868 CACCACCAGATACAA CCCGCAGCGCC CCA GGTGCTGCGGG TTTTTCTTTAGCCGC TERM 3059 3828892 - 3828868 - f 100 -17.1 -3.62616 | opp_overlap 3828868 CACCACCAGATACAA CCCGCAGCGCC CCA GGTGCTGCGGG TTTTTCTTTAGCCGC Ajs_3624 3828954 - 3829412 + | hypothetical protein Ajs_3625 3829550 - 3830896 + | tRNA-i(6)A37 thiotransferase enzyme MiaB Ajs_3626 3832397 - 3831018 - | signal recognition particle subunit FFH/SRP54 (srp54) Ajs_3627 3832489 - 3833289 + | cytochrome c assembly protein Ajs_3628 3833286 - 3833516 + | hypothetical protein Ajs_3629 3833521 - 3835221 + | integral membrane sensor signal transduction histidine kinase Ajs_3630 3835237 - 3836745 + | two component, sigma54 specific, Fis family transcriptional regulator Ajs_3631 3836726 - 3837325 + | N-acetyl-anhydromuranmyl-L-alanine amidase TERM 3060 3837840 - 3837829 - g 85 -5.8 -5.03314 | TCGAGCCGCAAAAAA TCGC CGTG GCGA TGATGAAAGCATTCC Ajs_3632 3837681 - 3840599 + | ribonucleotide-diphosphate reductase subunit alpha TERM 3061 3840676 - 3840690 + F 76 -5.6 -4.67038 | overlap 3840687 AACAGATCACGCCTG GCAACG CTT CGGTGC TTTTCATTTTGAAGC Ajs_3633 3840738 - 3841928 + | ribonucleotide-diphosphate reductase subunit beta TERM 3062 3842047 - 3842081 + F 73 -11.4 -3.57144 | overlap 3842050 TCAGTCGTCGCCATG GATCGCTCCACGCC CAATGCA GGCGTGGGGTGCTC TTTGCAAATCGACCC TERM 3063 3842210 - 3842198 - g 87 -6.9 -5.00616 | overlap 3842181 CGCTCCTGCAAAAAA GGCCG TAG CAGCC AAGAAGGCAGCGCCC TERM 3064 3842267 - 3842255 - g 77 -6.9 -4.56597 | overlap 3842239 CGCTCCTGCCAAAAA GGCCG TAG CAGCC AAGAAGGCAGCACCC TERM 3065 3842306 - 3842291 - g 78 -6.1 -4.58663 | overlap 3842277 3842295 AGCACCCGCCAAAAA GGCAG CCGCTC CTGCC AAAAAGGCCGTAGCA TERM 3066 3842324 - 3842312 - g 77 -6.9 -4.56597 | overlap 3842295 CGCTCCTGCCAAAAA GGCCG TAG CAGCC AAGAAGGCAGCACCC TERM 3067 3842381 - 3842369 - g 84 -9.1 -4.56597 | overlap 3842352 CGCTCCTGCCAAAAA GGCTG TAG CAGCC AAGAAGGCAGCACCC TERM 3068 3842420 - 3842405 - g 78 -6.1 -4.58663 | overlap 3842391 3842409 AGCACCCGCCAAAAA GGCAG CCGCTC CTGCC AAAAAGGCCGTAGCA TERM 3069 3842438 - 3842426 - g 77 -6.9 -4.56597 | overlap 3842409 CGCTCCTGCCAAAAA GGCCG TAG CAGCC AAGAAGGCAGCACCC TERM 3070 3842477 - 3842462 - g 78 -6.1 -4.58663 | overlap 3842448 3842466 AGCACCCGCCAAAAA GGCAG CCGCTC CTGCC AAAAAGGCCGTAGCA TERM 3071 3842495 - 3842483 - g 77 -6.9 -4.56597 | overlap 3842466 CGCTCCTGCCAAAAA GGCCG TAG CAGCC AAGAAGGTAGCACCC TERM 3072 3842552 - 3842540 - g 77 -6.9 -4.56597 | overlap 3842523 CGCTCCTGCCAAAAA GGCCG TAG CAGCC AAGAAGGCAGCACCC Ajs_3634 3842109 - 3842690 + | histone protein TERM 3073 3842716 - 3842733 + T 100 -12.7 -5.60993 | CAGTCCAGCCTACGA CCCGGTG CTTG CACCGGG TTTTTTTATGGCGAA Ajs_3635 3843684 - 3842788 - | ribokinase-like domain-containing protein Ajs_3636 3845047 - 3843710 - | Zinc finger-domain-containing protein Ajs_3637 3845990 - 3845097 - | 50S ribosomal protein L11P methyltransferase TERM 3074 3846052 - 3846027 - R 100 -19.1 -5.53991 | GATCCATGAAAAAAA GCTGGCATCCG TTTC CGGATGCCAGC GGGCAGGTCAGAAGT Ajs_3638 3847425 - 3846076 - | acetyl-CoA carboxylase, biotin carboxylase TERM 3075 3847516 - 3847464 - R 83 -5.4 -4.99035 | opp_overlap 3847490, overlap 3847465 3847503 GCATGCAGACAAAAA CCCG-CGCCAGCGCCTGGTGCTGC CATGCAT GC-GCAACGAGCGCATGCGGCGGG GGCTGAAGCGCTCAT Ajs_3639 3848003 - 3847539 - | biotin carboxyl carrier protein Ajs_3640 3848701 - 3848114 - | redoxin domain-containing protein TERM 3076 3848210 - 3848222 + g 73 -6.2 -4.4078 | opp_overlap 3848210 AAACAGTACGGTAAA GGGC AGCCC GCCC TTTTCGTTGCCCAGC Ajs_3641 3849309 - 3848698 - | hypothetical protein TERM 3077 3848805 - 3848759 - G 74 -15.8 -2.62263 | gap 2 ACGGCTTGCAGATCA CCCCGGGGCGCGC-GC-CCCCG GGCGT CGGGGCGCAGCGCGCCGCGCAG GTCGTCCAGGTCATA Ajs_3642 3849526 - 3850950 + | UDP-N-acetylmuramate TERM 3078 3850987 - 3850945 - T 71 -5.6 -4.37527 | opp_overlap 3850945 3850949 3850950, overlap 3850939 3850948 3850950 GCAGAACTATCAAAA CAATAGCTGCTATCGCTT GATTAAT AAGCGCTAGCAGCCTTTT TGGCTTGAAACTTAG TERM 3079 3850984 - 3850948 - T 76 -7.3 -4.29049 | opp_overlap 3850945 3850949 3850950, overlap 3850939 3850945 3850950 GAACTATCAAAACAA TAGCTGCTATCGCTT GATTAAT AAGCGCTAGCAGCCT TTTTGGCTTGAAACT TERM 3080 3850949 - 3850983 + T 93 -9.3 -4.74103 | opp_overlap 3850939 3850948 3850945 3850950, overlap 3850945 3850950 AACTATCAAAACAAT AGCTGCTATCGCTTG ATTAA TAAGCGCTAGCAGCC TTTTTGGCTTGAAAC TERM 3081 3850982 - 3850950 - T 78 -12.1 -3.73084 | opp_overlap 3850945 3850950 3850949, overlap 3850939 3850948 3850945 ACTATCAAAACAATA GCTGCTATCGCTT GATTAAT AAGCGCTAGCAGC CTTTTTGGCTTGAAA TERM 3082 3850950 - 3850982 + T 76 -12.8 -3.4398 | opp_overlap 3850939 3850948 3850945 3850950, overlap 3850945 3850949 ACTATCAAAACAATA GCTGCTATCGCTTG ATTAA TAAGCGCTAGCAGC CTTTTTGGCTTGAAA Ajs_3643 3851310 - 3850999 - | hypothetical protein Ajs_3644 3852523 - 3851405 - | phospho-2-dehydro-3-deoxyheptonate aldolase TERM 3083 3851875 - 3851912 + g 70 -11.3 -3.61715 | overlap 3851876 GGCTGGCGGACTGGA TGGCATCGGTGGCGATG CGGA TGTTGCCATCGGTGCCG TTCTTGAAGCCGATG TERM 3084 3852616 - 3852578 - R 71 -9.7 -3.7319 | gap 1, opp_overlap 3852585, overlap 3852585 ACGGAGAACAGATAA CAAAAAACCGCCG-GGCT TTTC AGCTTCGGCGGTTTCTTA GAGAAGGGGGCTCAG TERM 3085 3852585 - 3852609 + r 81 -10 -4.15044 | gap 1, opp_overlap 3852578 3852585 ACAGATAACAAAAAA CCGCCG-GGCT TTTC AGCTTCGGCGG TTTCTTAGAGAAGGG TERM 3086 3852609 - 3852585 - R 100 -7.8 -5.62045 | gap 1, opp_overlap 3852585, overlap 3852578 ACAGATAACAAAAAA CCGCCG-GGCT TTTC AGCTTCGGCGG TTTCTTAGAGAAGGG Ajs_3645 3853325 - 3852777 - | hypothetical protein Ajs_3646 3854808 - 3853348 - | microcin-processing peptidase 2 Ajs_3647 3856042 - 3854870 - | rod shape-determining protein RodA TERM 3087 3857211 - 3857193 - H 75 -3 -4.86731 | overlap 3857194 CTCCGGGAAATAAAA CGAGCACA GCA TGCGCCCC AGGCCCTGGAACATC TERM 3088 3858499 - 3858511 + H 74 -9.1 -3.84451 | opp_overlap 3858497 TCCACCAAAAACCGT TGCCG GAC CGGCA TTTGCCTTTCGACAG Ajs_3649 3858544 - 3859131 + | hypothetical protein Ajs_3650 3860685 - 3859132 - | O-antigen polymerase TERM 3089 3860690 - 3860658 - G 78 -9.8 -4.11216 | gap 1 GCGCCATCGCCAAAA CCGCCA-GCGGCGTG AAAT CAGGACGCATGGCGG GGTGGTGGTGCAAAG Ajs_3651 3861210 - 3860734 - | cytochrome c, class I TERM 3090 3860811 - 3860777 - G 85 -7.8 -4.74504 | overlap 3860778 ACTTCAAGCCAAAAA TGCCTCCAGCGCTT TTGTAGC AAGCGCTGGCAGCT ATCAAAGGCAGAGCA Ajs_3652 3861947 - 3861282 - | hypothetical protein Ajs_3653 3862706 - 3861975 - | ECF subfamily RNA polymerase sigma-24 factor TERM 3091 3863302 - 3863248 - g 72 -8.5 -4.03888 | gap 2 CATCGAGAAGAAGAA GCAGATCCAGGCG-C-AGATCGACGCC TGG GCCGCCGAACTCGTCGCCGGCACCTGC CCGCAGCCTGTGCGC TERM 3092 3863446 - 3863470 + G 79 -2.7 -5.06414 | overlap 3863447 3863448 GGGTGCGATCGACTC CAGCTACCAGT TCC ACTGGAAGCGC TTTTTGTTCGACAAC Ajs_3654 3862835 - 3864922 + | ribonuclease II TERM 3093 3865512 - 3865495 - g 75 -6.9 -4.36411 | CATCAACGAGGAAAA CGCCCGC CCGC GCAAGCG CTACATCAGCCCCGC TERM 3094 3865717 - 3865756 + G 70 -11.2 -3.57561 | gap 1 GGGCAACCGCCTGCT GGACCGCCGCGCCGAGGCC ATC GCCCGCGCCGCGG-GGCCC TTTGGCCACTTCGGC Ajs_3655 3864947 - 3865861 + | TonB family protein TERM 3095 3866403 - 3866387 - g 83 -3.6 -5.252 | opp_overlap 3866389, overlap 3866389 3866391 CAGCGCTACAAAAAA CAGAGC TACTG GCGCTG GACATGCAAGCGCCA Ajs_3656 3865861 - 3866709 + | shikimate 5-dehydrogenase TERM 3096 3867391 - 3867360 - g 71 -12.8 -3.30635 | overlap 3867349 3867361 CAAACGCTTCGAGAA GGCGCCCGGCTCGG CCTA CCTGGCCGGGCGCA CGCGCGCGCTGCTGG TERM 3097 3867390 - 3867361 - g 77 -16.3 -2.5806 | overlap 3867360 3867349 AAACGCTTCGAGAAG GCGCCCGGCTCGG CCTA CCTGGCCGGGCGC ACGCGCGCGCTGCTG Ajs_3657 3866713 - 3867435 + | monofunctional biosynthetic peptidoglycan transglycosylase TERM 3098 3867878 - 3867859 - g 87 -15 -3.7732 | GCTGCAGATGAAGAA GGCCGTGG TAGG CCACGGCC GCGCGGCCAAGTCGC Ajs_3658 3867515 - 3868075 + | crossover junction endodeoxyribonuclease RuvC Ajs_3659 3869764 - 3868112 - | methyl-accepting chemotaxis sensory transducer TERM 3099 3869339 - 3869377 + g 72 -13 -3.21099 | overlap 3869331 CGCGCCATCGAGCAG GGCGCGCTCGATCTGGTC GAA GATCGGCACGAGCCCGCC TTCGTACTGCCCGAC Ajs_3660 3870019 - 3871644 + | methyl-accepting chemotaxis sensory transducer TERM 3100 3871656 - 3871685 + T 70 -10.6 -3.66999 | opp_overlap 3871676 CTGATACGGCCACTT GGAGCCGGCCTG GCATGA CAGGCCGGCGGC TTTGCGTGGGTCAGT Ajs_3661 3873540 - 3871696 - | thiamine biosynthesis protein ThiC TERM 3101 3872652 - 3872674 + g 75 -9 -4.08216 | AGATCTCCCAGGTCA GGTCCTCGGC AAT GCCGCCGACC TTTTCCAGCGCCTGG TERM 3102 3872963 - 3872990 + g 78 -9.8 -4.12188 | CGGCCACGGGCGACC TCGTCGCGCACG AACT CGGGCGTGATGA TTTTCGGGATGCTCG Ajs_3662 3873961 - 3873785 - | hypothetical protein lpxC 3874903 - 3873980 - | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase TERM 3103 3876623 - 3876590 - g 73 -12.3 -3.42996 | overlap 3876580 3876609 GATGACGCAGCAGAA CTCCGCGCTGGTGGA GGAA TCCACCGCCGCGGCG GCCAGCCTGCGCGAG Ajs_3664 3875067 - 3876863 + | methyl-accepting chemotaxis sensory transducer TERM 3104 3876945 - 3876964 + T 100 -15 -4.8622 | opp_overlap 3876945 ACCGCACATGAAAAA GCCGCTGG CACG CCAGCGGC TTTTTCATTCAGGCA TERM 3105 3876964 - 3876945 - T 100 -15 -4.80882 | opp_overlap 3876945 ACCGCACATGAAAAA GCCGCTGG CACG CCAGCGGC TTTTTCATTCAGGCA Ajs_3665 3878234 - 3877005 - | cell division protein FtsZ Ajs_3666 3879626 - 3878397 - | cell division protein FtsA TERM 3106 3878483 - 3878499 + g 74 -15.1 -3.01712 | CCTTGAAGCCGCGCA GGCGCGC CAG GCGCGCC TCTTCCAGCAGGCCC Ajs_3667 3880477 - 3879644 - | polypeptide-transport-associated domain-containing protein Ajs_3668 3881472 - 3880474 - | D-alanine--D-alanine ligase TERM 3107 3881488 - 3881502 + r 100 -4.2 -5.60993 | overlap 3881487 3881486 TGCGCCCGTCCTTCC TGCGCT AGC AGCTCA TTTTTTTGTAGCAAA murC 3882902 - 3881469 - | UDP-N-acetylmuramate--L-alanine ligase TERM 3108 3882163 - 3882133 - G 74 -12.6 -3.57144 | CGCTGCACGGTGAAA TGCATCTGCGTGCC CAC GGCACGCACATCCA CGGCGCGCACCTCGG Ajs_3670 3884098 - 3882899 - | UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase TERM 3109 3883819 - 3883809 - G 76 -8.2 -4.27316 | opp_overlap 3883816, overlap 3883810 GGCTCGAACGCAAAA CCGC GCG GCGG CACCAGGCGCTCTTC TERM 3110 3884185 - 3884223 + r 79 -8.8 -4.30576 | opp_overlap 3884169 3884187 3884188, overlap 3884188 CCCGAGGCGGTGAAT AAGGTTCCTCATGCACGG CCT CCGCGCATGAGCAGCTTG TTTTCGTAATCCACA TERM 3111 3884188 - 3884220 + r 95 -12.7 -4.27443 | opp_overlap 3884169 3884188 3884187, overlap 3884185 GAGGCGGTGAATAAG GTTCCTCATGCACGG CCT CCGCGCATGAGCAGC TTGTTTTCGTAATCC Ajs_3671 3885473 - 3884193 - | cell division protein FtsW murD 3886966 - 3885470 - | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase TERM 3112 3887132 - 3887189 + r 81 -15.6 -3.01791 | opp_overlap 3887129 3887117 3887116 GCGCGCCACGAACTC GGCAGCGGCG-GCCGCGGCTGACACCGC GGGT GCGGTGT-AGTCATAGCGCGCCGCTGCA TCTTGCGCGGGCGCT Ajs_3673 3888537 - 3887359 - | phospho-N-acetylmuramoyl-pentapeptide-transferase Ajs_3674 3889976 - 3888528 - | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase TERM 3113 3888738 - 3888706 - G 70 -10.6 -3.53811 | gap 2, overlap 3888707 GCCATGTCCTTGAAA TGCCGTGC-GGCC-GT CCC ACAGGCCTGCACGGCG TGGGCGCTCAGGTCG Ajs_3675 3891478 - 3889973 - | UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase Ajs_3676 3893223 - 3891475 - | peptidoglycan synthetase FtsI TERM 3114 3892230 - 3892250 + g 70 -11.1 -3.60792 | overlap 3892219 3892233 TGATGGTCAGGCGGC CTGGCGTGG TGT CCACGCTGG TTTCGGGCTTGAAGC Ajs_3677 3893522 - 3893220 - | cell division protein FtsL Ajs_3678 3894558 - 3893632 - | S-adenosyl-methyltransferase MraW TERM 3115 3894357 - 3894337 - G 100 -16.9 -4.27316 | opp_overlap 3894334 3894331 GTGCCGAATGGAAAA GCGCGCATC CGT GATGCGCGC CGCTGCTTGAATGGC Ajs_3679 3894996 - 3894568 - | cell division protein MraZ TERM 3116 3895189 - 3895147 - R 70 -10.1 -3.61468 | opp_overlap 3895147, overlap 3895144 3895143 TTGCAATGAAATCAA GGAC-TTAGCGCCGATTTCCA AGG TGAAAATCGG-GCAAATGTCC TTATTGATTAAGCAC hslU 3896602 - 3895262 - | ATP-dependent protease ATP-binding subunit Ajs_3681 3897279 - 3896698 - | ATP-dependent protease peptidase subunit Ajs_3682 3899145 - 3897337 - | hypothetical protein Ajs_3683 3900044 - 3899199 - | TraR/DksA family transcriptional regulator TERM 3117 3899953 - 3899966 + g 84 -9.5 -4.56597 | GGTGCGAATGGCACG CGCCC CAGG GGGCG TTTTTGCCGGGGCGC Ajs_3684 3901177 - 3900068 - | cobalamin synthesis protein, P47K TERM 3118 3901229 - 3901209 - R 91 -11.8 -4.35926 | AGTGCAAACGCAAAA CGGCGGCC TGGAC GACCGCCG CATGGGAATCGAATT Ajs_3685 3902472 - 3901285 - | SAM-dependent methyltransferase TERM 3119 3902272 - 3902252 - G 100 -9.7 -5.64274 | opp_overlap 3902255 GCAGCTATAAAAAAA GAAGCATCG ATG CGCTGCTTC TCGTCAAAGCTCCAC TERM 3120 3902486 - 3902501 + r 71 -6 -4.36914 | overlap 3902484 ATCCCTGGATTGTGC GCGCGC GGGT GAGCGC TTTTGTCGCACCCGG Ajs_3686 3903535 - 3902564 - | tyrosine recombinase XerC Ajs_3687 3904327 - 3903635 - | hypothetical protein Ajs_3688 3905271 - 3904324 - | diaminopimelate epimerase TERM 3121 3904725 - 3904761 + g 71 -2.8 -4.62069 | opp_overlap 3904749, overlap 3904727 CTGCTATTAATATCG TAGCTGCTGACGCCTG TCCAT CAAGCGCCAGGGGCCA TTTTTGGCCTGAACC TERM 3122 3905260 - 3905276 + g 83 -2.1 -5.15634 | overlap 3905262 3905271 3905272 CACGGGGAAACCCCG CACGGCT GAC ATCCGAG TTTTTTGCTCGGCTA Ajs_3689 3905322 - 3905594 + | hypothetical protein Ajs_3690 3905677 - 3905877 + | hypothetical protein Ajs_3691 3905912 - 3907618 + | beta-lactamase domain-containing protein Ajs_3692 3907611 - 3908411 + | RNA-binding S4 domain-containing protein Ajs_3693 3908593 - 3910386 + | YhhN family protein ruvB 3911461 - 3910391 - | Holliday junction DNA helicase B TERM 3123 3911715 - 3911742 + G 71 -2.7 -4.60487 | overlap 3911715 3911716 ACACCCCTCCTTCCT G-AGCCGCATGGC CATC GCCAT-CGGCAGC TTTTTCGCCATCCTG TERM 3124 3911962 - 3911931 - g 85 -13.6 -4.10453 | GAAAGTGGTGGAAAA GCGCGTCGAAGTCG CCAC CGACACCGCCGCGC TGCAGCTGCTGGGCC Ajs_3695 3911686 - 3912324 + | hypothetical protein TERM 3125 3913969 - 3913988 + G 70 -10 -3.65046 | gap 1 TCGGCCTGGTGGTGG GCG-AGCCG GTG CGGCTGCGC TTCTTCGGCTCCAGC Ajs_3696 3912333 - 3914243 + | putative heat-shock chaperone protein Ajs_3697 3914254 - 3914847 + | NAD(P)H dehydrogenase (quinone) TERM 3126 3917668 - 3917714 + G 95 -20.3 -2.53015 | gap 2 CATGGAGGCCGAGGA CCAGCAGCGCAGCCTGGGCGACA GCC TGCCGCCCGGGCTG-G-TGCTGG TGGGTTAGGGCCTGT Ajs_3698 3914852 - 3917722 + | DnaK-related protein TERM 3127 3917776 - 3917766 - T 72 -2.4 -4.72272 | overlap 3917767 3917768 CGTTGCGATCAAAAA GGGC CAG GCGC AAGGCGCCAAACGAA TERM 3128 3917810 - 3917792 - T 83 -14.6 -3.51976 | overlap 3917788 AAGGCGCCAAACGAA GCTGGGGT GCT ACCCCAGC GAGGCTTGGCAACGC Ajs_3699 3919438 - 3917987 - | endoproteinase Arg-C Ajs_3700 3920049 - 3919477 - | Holliday junction DNA helicase RuvA TERM 3129 3919681 - 3919691 + g 83 -8.2 -4.64676 | CAGCTCCAGCAGCAG CCGC TCG GCGG TTTTCTTGCCGATAC TERM 3130 3919917 - 3919939 + g 71 -12.6 -3.30441 | opp_overlap 3919901 GCGTGAGCAGGCTCA CCCGCTCGCC CAC GGCGGGCAGG TTGTAGAAGGTGCTC Ajs_3701 3920052 - 3921059 + | PhoH family protein Ajs_3702 3921125 - 3921583 + | hypothetical protein Ajs_3703 3921809 - 3922897 + | transposase, IS4 family protein TERM 3131 3923400 - 3923430 + G 78 -15.4 -3.12668 | overlap 3923391 ACCTTCCGCAAGGTC GTGCCCTGGCTGCT GCT GGCGGCCACGGCAC TCTTCGCCTTTGGCC Ajs_3704 3923067 - 3923843 + | hypothetical protein Ajs_3705 3925279 - 3923870 - | DEAD/DEAH box helicase domain-containing protein Ajs_3706 3925753 - 3925289 - | D-tyrosyl-tRNA deacylase Ajs_3707 3926709 - 3925750 - | cation diffusion facilitator family transporter TERM 3132 3926774 - 3926752 - g 93 -18.4 -3.48276 | CCTGCTGGCACACAA GCGCCCGGCG CGC CGCCGGACGC GCCTGCTCGCCAAAG Ajs_3708 3926730 - 3928943 + | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) TERM 3133 3930438 - 3930462 + G 72 -11.4 -3.54424 | overlap 3930415 GGGCGGTGTGCACCG GCTGCACAGC CGCAA GCTGCGCAGC TTTGCCGAAGTGGCG Ajs_3709 3929005 - 3930486 + | AMP nucleosidase TERM 3134 3930513 - 3930547 + T 80 -5.1 -4.94992 | gap 2, overlap 3930521 GCTACTTCATCGATA GCTGCTC-G-CGCTTAT CCC ATAAGCGTTTGAGCCGC TTTTTATCAATTTAG Ajs_3710 3931818 - 3930559 - | hypothetical protein Ajs_3711 3931958 - 3932929 + | ABC transporter related Ajs_3712 3932931 - 3933740 + | ABC transporter TERM 3135 3935223 - 3935270 + G 78 -13.9 -3.57144 | opp_overlap 3935224 3935227, overlap 3935224 GGAGGCATCGCAAGA ACCAGCGCCCGCGCCGGCGCC GCAGGG GGCGCCCGTGCGGGTGCGGCA TTTCGCGGTGAACGA TERM 3136 3935268 - 3935224 - g 88 -16.3 -3.65522 | gap 1, opp_overlap 3935223 3935224, overlap 3935227 GAGGCATCGCAAGAA CCAGCGCCCGCGCCGGCGCC GCAGGG GGCGCCCGTGCGGGTGC-GG CATTTCGCGGTGAAC TERM 3137 3935224 - 3935269 + G 80 -17.4 -2.74144 | opp_overlap 3935224 3935227, overlap 3935223 GAGGCATCGCAAGAA CCAGCGCCCGCGCCGGCGCC GCAGGG GGCGCCCGTGCGGGTGCGGC ATTTCGCGGTGAACG TERM 3138 3935266 - 3935227 - g 86 -17.7 -2.94045 | opp_overlap 3935224 3935223, overlap 3935224 GCATCGCAAGAACCA GCGCCCGCGCCGGCGCC GCAGGG GGCGCCCGTGCGGGTGC GGCATTTCGCGGTGA Ajs_3714 3934234 - 3935580 + | putative GAF sensor protein Ajs_3715 3936032 - 3935601 - | hypothetical protein Ajs_3716 3936748 - 3936029 - | hypothetical protein Ajs_3717 3938519 - 3936924 - | glucose-methanol-choline oxidoreductase TERM 3139 3938576 - 3938594 + H 100 -4.5 -5.60993 | overlap 3938573 CAGACGCGCGATTGC CGATACC ATCAC GGCATCG TTTTTTTCTCACCAC Ajs_3718 3938632 - 3939480 + | 3-hydroxybutyryl-CoA dehydrogenase Ajs_3719 3939501 - 3940292 + | 2-dehydro-3-deoxyglucarate aldolase TERM 3140 3940555 - 3940573 + F 83 -14.6 -3.51976 | overlap 3940551 GCGTTGCCAAGCCTC GCTGGGGT AGC ACCCCAGC TTCGTTTGGCGCCTT TERM 3141 3940589 - 3940599 + F 72 -2.4 -4.72272 | overlap 3940577 3940576 TTCGTTTGGCGCCTT GCGC CTG GCCC TTTTTGATCGCAACG TERM 3142 3940771 - 3940757 - f 72 -2.1 -4.72846 | gap 1, opp_overlap 3940758, overlap 3940758 3940761 CCAGAGAGGGAAAAA CCATGG ACGT CCA-GG TATCGTCCGAGCGCG TERM 3143 3941097 - 3941107 + G 79 -8.2 -4.30576 | opp_overlap 3941096 CACGGGGCAGGACAC GGCC GTG GGCC TTTTCATCCTGGGCG Ajs_3720 3940759 - 3942018 + | hypothetical protein Ajs_3721 3942068 - 3943201 + | peptidase M48, Ste24p TERM 3144 3943217 - 3943253 + T 100 -18.1 -4.13945 | opp_overlap 3943217 3943219, overlap 3943219 GCGCTCCTGAAAAAA GAGCTGCCAGCGCTTGA TTG TCAAGGGCTGGCAGCTG TTTTGGCATAAAAGT TERM 3145 3943253 - 3943217 - T 100 -18.1 -5.00616 | opp_overlap 3943217 3943219, overlap 3943219 GCGCTCCTGAAAAAA GAGCTGCCAGCGCTTGA TTG TCAAGGGCTGGCAGCTG TTTTGGCATAAAAGT TERM 3146 3943251 - 3943219 - T 100 -20.7 -4.13561 | opp_overlap 3943219 3943217, overlap 3943217 GCTCCTGAAAAAAGA GCTGCCAGCGCTTGA TTG TCAAGGGCTGGCAGC TGTTTTGGCATAAAA TERM 3147 3943219 - 3943251 + T 100 -20.7 -3.6692 | opp_overlap 3943217 3943219, overlap 3943217 GCTCCTGAAAAAAGA GCTGCCAGCGCTTGA TTG TCAAGGGCTGGCAGC TGTTTTGGCATAAAA Ajs_3722 3943828 - 3943658 - | hypothetical protein Ajs_3723 3944072 - 3944989 + | cysteine synthase TERM 3148 3945015 - 3945030 + F 100 -11.8 -5.31456 | opp_overlap 3945015 GCACCTTTTTGACAA GGCCCC GCAA GGGGCC TTTTTTATGCCTTGC TERM 3149 3945030 - 3945015 - f 72 -11.8 -3.29144 | opp_overlap 3945015 GCACCTTTTTGACAA GGCCCC GCAA GGGGCC TTTTTTATGCCTTGC Ajs_3724 3945126 - 3945965 + | endonuclease/exonuclease/phosphatase TERM 3150 3946197 - 3946248 + G 72 -5.1 -4.43213 | overlap 3946222 TGGACGGCTTTGGCT CGCCCGACCTGCCTG-ATCATTTTG TCGA CAGCCTGGTGCAGGCGGG-CGTGCG TTTTCGTGTGTTCGA Ajs_3725 3945965 - 3947182 + | cardiolipin synthase 2 TERM 3151 3947206 - 3947166 - f 74 -10.4 -3.72576 | gap 1, overlap 3947167 CGCCCGCTGACCAAA CGGCACGGGCGT-CCTGAG GCAG CCCATGCACGCCCCTGCCA CTTCGCCTGTCCACA TERM 3152 3947552 - 3947577 + G 70 -10.4 -3.65812 | overlap 3947553 ACCTGGGCTCGCTGA TCGGTGGCGC TTCGGT GCGCTACCGG TTGTATTCGCGCCAG Ajs_3726 3947191 - 3948258 + | hypothetical protein TERM 3153 3948382 - 3948368 - g 72 -11.4 -3.51232 | overlap 3948364 CCTCTCCGAAATCAA GCTGCC GCT GGCAGC CCTGCCCGCCGGCGC TERM 3154 3949696 - 3949720 + G 75 -6.9 -4.36914 | opp_overlap 3949667 3949694 3949697, overlap 3949697 GCGGCGGCAACTACA ACGCCCCGGCG CAG CGCGTGGGCGA TTTTCTGGCGCGCCG Ajs_3727 3948345 - 3950126 + | FAD dependent oxidoreductase TERM 3155 3950112 - 3950153 + T 74 -9.3 -3.85698 | gap 1 GGCACGCGCGGCTCG GGCGCGGCGGC-CTGAACCG GGC CAGTTCACTGCGGCGGCGCC TTTCTCCAGACCGGC Ajs_3728 3950764 - 3950138 - | hypothetical protein TERM 3156 3951691 - 3951639 - R 74 -10.4 -3.72324 | gap 1, overlap 3951644 GAGCCTGAGGAAGAA CGAGAGGTGCGATCCCGCACGGCAC CCCA GTGCCGTGCGGGTGCGC-CCGGTTA CAACCGAGAGGCCAT TERM 3157 3951686 - 3951644 - R 100 -21.3 -3.03203 | gap 1, overlap 3951639 TGAGGAAGAACGAGA GGTGCGATCCCGCACGGCAC CCCA GTGCCGTGCGGGTGCGC-CC GGTTACAACCGAGAG Ajs_3730 3952621 - 3951689 - | electron transfer flavoprotein, alpha subunit Ajs_3731 3953392 - 3952643 - | electron transfer flavoprotein beta-subunit Ajs_3732 3954388 - 3953414 - | 2-nitropropane dioxygenase, NPD Ajs_3733 3955395 - 3954400 - | hypothetical protein TERM 3158 3955451 - 3955417 - R 100 -4.9 -5.55769 | opp_overlap 3955417 3955415 3955418, overlap 3955418 3955440 3955441 TCCTAGAATAAAAAA TGGTTCCAGCGCTTA CCCAT CAAGCGCTGGCAGCT ATCTTTTAGATAGCT TERM 3159 3955450 - 3955418 - R 71 -8.4 -3.92377 | opp_overlap 3955418 3955417 3955415, overlap 3955417 3955440 3955441 CCTAGAATAAAAAAT GGTTCCAGCGCTTA CCCAT CAAGCGCTGGCAGC TATCTTTTAGATAGC Ajs_3734 3956701 - 3955466 - | L-carnitine dehydratase/bile acid-inducible protein F Ajs_3735 3957567 - 3956737 - | enoyl-CoA hydratase Ajs_3736 3958807 - 3957677 - | acyl-CoA dehydrogenase domain-containing protein Ajs_3737 3960044 - 3958833 - | acyl-CoA dehydrogenase domain-containing protein Ajs_3738 3961254 - 3960055 - | acetyl-CoA acetyltransferases TERM 3160 3961356 - 3961374 + r 73 -3 -4.77036 | opp_overlap 3961356 3961359, overlap 3961359 GAAACCTTTGAATGA CAAGCGCT GGC AGCTCCTG TTTTTGATAATCGGC Ajs_3739 3963514 - 3961397 - | 3-hydroxyacyl-CoA dehydrogenase, NAD-binding Ajs_3740 3963647 - 3964585 + | LysR family transcriptional regulator Ajs_3741 3964961 - 3964599 - | hypothetical protein TERM 3161 3965023 - 3964999 - R 89 -10.7 -4.3208 | opp_overlap 3964999 CTTTACAACGCAAAA GCCCCTGCC GGATGTT GACAGGGGC TTGTGAAGCGAAGGT Ajs_3742 3965934 - 3965056 - | heat shock protein HtpX Ajs_3743 3966835 - 3966062 - | putative transmembrane protein Ajs_3744 3967695 - 3966832 - | hypothetical protein TERM 3162 3967335 - 3967307 - G 70 -10.2 -3.72893 | overlap 3967333 CAGGCGTTCACGAAA GGCTTGGGCGTC TGCGC GGCGCCAAAGCC GTACACCGCCGAGCC Ajs_3745 3968773 - 3967730 - | dihydroorotase TERM 3163 3968848 - 3968819 - R 100 -11.3 -5.04987 | gap 1, overlap 3968821 AACACGCGCAAAAAA GAGCCCCGGCGCCG TAG CGG-GCCGGGGCAA ACCCCGTAGTAGGGG TERM 3164 3968846 - 3968821 - R 100 -18.3 -4.14633 | gap 1, overlap 3968819 CACGCGCAAAAAAGA GCCCCGGCGCCG TAG CGG-GCCGGGGC AAACCCCGTAGTAGG Ajs_3746 3969475 - 3968912 - | hypothetical protein TERM 3165 3969292 - 3969341 + g 77 -15.8 -3.05384 | gap 1, opp_overlap 3969307 CGTCCACGGTAGATC CGGTGACGGTCAACACGCCCAGT TGGTC GCTGGGCGTGG-GATCGTCGTCG TTGCCTCCGCCGCAG TERM 3166 3969396 - 3969370 - G 71 -9.2 -3.79113 | opp_overlap 3969385, overlap 3969367 3969371 AGGCGCTGAGAAGAA GGGCAGTGGCGG CCA CCGCCGCGGCGC AGGAGGTTCTGACAA Ajs_3747 3975384 - 3969559 - | UvrA family protein TERM 3167 3969925 - 3969967 + g 87 -18.4 -2.71364 | CTCGCCGCCGCTCAG CGTGGGGCTGGGCTGGCCCA GCG TGAGGTAGCCCAGGCCCACG TCCTTCAAGAGCTGC TERM 3168 3976100 - 3976086 - g 79 -7.8 -4.56775 | overlap 3976087 ACGGGCGCGCAAAAA GGCCTG GCC CAGACC AAGCTGCAGCCCGTG Ajs_3748 3975543 - 3976655 + | extracellular ligand-binding receptor TERM 3169 3976665 - 3976711 + F 78 -15.1 -2.71731 | gap 1 CGCTGAAGCCCTTTT CGTGAGGTCAGACGCCGCCCGG GTGA TCGCGCGGCGTCTG-CGGCACG TCATTCCAGCGTAGG TERM 3170 3977027 - 3976993 - g 75 -13.7 -3.33261 | CGTGAACGGGCAGAA GATCGAACTCGTCGC GCTCG ACGACAAGTTCGACC CCAAGCTGACGCAGG Ajs_3749 3976790 - 3977914 + | extracellular ligand-binding receptor TERM 3171 3977943 - 3977999 + T 100 -25.4 -3.06796 | gap 2, opp_overlap 3977931 3977928 3977961, overlap 3977961 CCACGGCGGCGGAGT CC-ACCGC-CCCATCCAAAACGCGGAGC CTG GCTCCGCGTTTTGGATGGGTGGGGCCGG TTCACTGCGCTGCGC TERM 3172 3977961 - 3977979 + T 100 -16 -4.19817 | opp_overlap 3977961, overlap 3977943 CCGCCCCATCCAAAA CGCGGAGC CTG GCTCCGCG TTTTGGATGGGTGGG TERM 3173 3977979 - 3977961 - T 100 -16 -4.18018 | opp_overlap 3977961 3977943 CCGCCCCATCCAAAA CGCGGAGC CTG GCTCCGCG TTTTGGATGGGTGGG Ajs_3750 3978213 - 3978001 - | hypothetical protein TERM 3174 3978242 - 3978221 - R 100 -14.5 -5.5112 | opp_overlap 3978220 GGCACCAATAAAAAA GCCTCACAC CATC GTGTGAGGC CTGTCTGATCGCAAG Ajs_3751 3979321 - 3978311 - | porin Ajs_3752 3981254 - 3979560 - | major facilitator superfamily transporter TERM 3175 3981174 - 3981186 + g 71 -3.4 -4.63218 | overlap 3981171 GCCGAGGGACGAGGC GAAG ATCAC CTTC TTTTCTTCCGCCGAC TERM 3176 3981653 - 3981626 - R 100 -18.5 -4.65895 | GGTCCCATGCAAAAA GGCGCCGCAGA ACGCTG TCTGCGGCGCC TTGGAACGCCTGCCG Ajs_3753 3982354 - 3981701 - | DSBA oxidoreductase Ajs_3754 3982635 - 3982351 - | hypothetical protein Ajs_3755 3983120 - 3982632 - | YbaK/prolyl-tRNA synthetase associated region Ajs_3756 3983234 - 3984967 + | diguanylate cyclase Ajs_3757 3985896 - 3984982 - | hydroxymethylglutaryl-CoA lyase Ajs_3758 3986845 - 3985925 - | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding Ajs_3759 3988902 - 3986884 - | 3-methylcrotonoyl-CoA carboxylase, alpha subunit Ajs_3760 3989622 - 3988903 - | putative transmembrane protein TERM 3177 3989257 - 3989232 - G 76 -14.7 -3.08679 | gap 1 TGTCGGCACCGAACA CGCCGGCG-GCC AGC AGCGCGCCGGCG GGCACGCGGATGAAG TERM 3178 3989491 - 3989458 - G 70 -10.2 -3.63627 | gap 1, overlap 3989442 3989439 GGCGTACAGGCGAAA GCCGCTGGCC-CAGC CCAAT GCGGCGGCCAGCGCC AGCAGCGCGGGCATG Ajs_3761 3990411 - 3989629 - | enoyl-CoA hydratase Ajs_3762 3990917 - 3990408 - | DinB family protein Ajs_3763 3992532 - 3990928 - | propionyl-CoA carboxylase Ajs_3764 3994283 - 3992547 - | acyl-CoA synthetase Ajs_3765 3994429 - 3995514 + | AraC family transcriptional regulator Ajs_3766 3996873 - 3995893 - | transposase, IS4 family protein TERM 3179 3997231 - 3997248 + H 74 -4.9 -4.65916 | gap 1 AAGTTGTTGCTAGCC GGTGA-CA AGG TGCTCACC TTTTCTTCCAATACA TERM 3180 3997339 - 3997353 + H 93 -7.2 -5.22312 | GGAATTGCGCTGAAC TTTGTC AGA GACAAA TTTTTTCCTATGGGT Ajs_3767 3997634 - 3998302 + | glutathione S-transferase domain-containing protein TERM 3181 3998755 - 3998726 - g 72 -4.3 -4.56597 | gap 1, overlap 3998737 3998738 TTGCCTGGCTAAAAA CCACC-GCCAAA GTGCCCG TGTGGCTGGTGG GAACCAGCCGAGGCA Ajs_3768 3998347 - 3999129 + | hypothetical protein TERM 3182 4000146 - 4000164 + G 80 -13.8 -3.64703 | TGCCAGTCCGCTGGA GCGCGCGC ACA GCGTGCGC TTTGGCTACGGCGCC TERM 3183 4000403 - 4000431 + G 71 -2.9 -4.59853 | overlap 4000404 GCGAGATGTGGGTGC GCCATTCGGCGGC CAC GCCGCGCAAGGAC TTTTTCAGCGGTTAC Ajs_3769 3999232 - 4000938 + | AMP-dependent synthetase and ligase TERM 3184 4001021 - 4000986 - T 78 -9.8 -3.96483 | gap 1, opp_overlap 4000973 4000986 4000985, overlap 4000988 ATGCTATTTAAATAA TAGCTTCTGGCGCTTAC CAG ATAAGCGCCAGA-GCCC GATTTGGCTCAAACT TERM 3185 4001019 - 4000988 - T 85 -14.6 -3.57185 | gap 1, opp_overlap 4000973 4000986 4000985, overlap 4000986 GCTATTTAAATAATA GCTTCTGGCGCTTAC CAG ATAAGCGCCAGA-GC CCGATTTGGCTCAAA Ajs_3770 4001753 - 4001058 - | hypothetical protein TERM 3186 4001312 - 4001326 + g 87 -7 -5.00616 | overlap 4001307 GCAGAAACTTCTGGC CCAGCG GGG CGCGGG TTTTTTCGGAAAAGA TERM 3187 4001790 - 4001776 - R 100 -5.6 -5.4505 | opp_overlap 4001788, overlap 4001777 TCCTTGAAGAAAAAA CGGGAA ACT CCCCCG AGTGTGCGTGTGCGC TERM 3188 4001951 - 4001961 + r 84 -4 -5.20328 | AGCGCTTGGGGCAGT TTTC ATT GAAA TTTCTTTTTTTCCAA TERM 3189 4001974 - 4001999 + r 72 -2.5 -4.75372 | gap 1, overlap 4001979 4001987 AAATTTCTTTTTTTC CAACG-GCCTGC ACC GCAAGCACTTTG TTTTTGATAGCTGCT Ajs_3771 4002488 - 4002057 - | hypothetical protein TERM 3190 4002324 - 4002313 - G 79 -7.2 -4.66537 | overlap 4002292 CGTTGCAACACAAAA GCGC TATA GCGC GAGCGCATCAACCGC TERM 3191 4002694 - 4002681 - H 73 -3.1 -4.79667 | opp_overlap 4002687 4002689, overlap 4002682 4002683 AAAATTGAGTAAAAA CTGCA CTAC TGCAA CCTGCGCAGGTGCGG TERM 3192 4003145 - 4003120 - g 70 -2.6 -4.63486 | gap 2, overlap 4003121 ATGCTCTCAACAAAA CGCTGACGGACC CCAA GGTCCAT--GCG CTGCTGCAGAAAGTG TERM 3193 4003933 - 4003987 + G 78 -10.5 -4.15565 | opp_overlap 4003933 4003934, overlap 4003934 CTTTTCAGACCAACA TCCTGGCGCTGAACGCCGCCGTG GAAGCCGCG CGCGCCGGCGAGCAGGGCCGGGG TTTTGCCGTGGTGGC Ajs_3772 4002804 - 4004564 + | methyl-accepting chemotaxis sensory transducer TERM 3194 4004574 - 4004603 + T 80 -15 -3.17194 | opp_overlap 4004569 TTTTAAGGCACCGGT TGCAGCCCGGCC TTGCGC GGGCGGGCTGCA TTGCATTGCCGCACT Ajs_3773 4005494 - 4004832 - | HAD family hydrolase Ajs_3774 4006695 - 4005565 - | acyl-CoA dehydrogenase domain-containing protein Ajs_3775 4007413 - 4006745 - | short chain dehydrogenase TERM 3195 4007073 - 4007047 - G 75 -13.6 -3.47928 | overlap 4007045 ACACGAAGGCAAACA CGCCGCCCGCGG CCT CCACCAGCGGCG CCACCTGCGGAATGA TERM 3196 4007466 - 4007429 - R 74 -10 -3.81741 | gap 1, opp_overlap 4007432, overlap 4007431 4007432 AAGTGATAAGCCAAA TAGGCCGCCAGCGCTTA TTCAT CAAGCGCTAGCAGC-TA TTAAAAAAAGAGCGC TERM 3197 4007465 - 4007431 - R 71 -10.7 -3.48766 | opp_overlap 4007432, overlap 4007429 4007432 GTGATAAGCCAAATA GGCCGCCAGCGCTTA TTCAT CAAGCGCTAGCAGCT ATTAAAAAAAGAGCG TERM 3198 4007464 - 4007432 - R 75 -14.2 -2.68778 | opp_overlap 4007432, overlap 4007431 4007429 TGATAAGCCAAATAG GCCGCCAGCGCTTA TTCAT CAAGCGCTAGCAGC TATTAAAAAAAGAGC TERM 3199 4007503 - 4007476 - R 100 -14.8 -5.53991 | opp_overlap 4007499 CAGCTATTAAAAAAA GAGCGCCACTGC GTGT GCAGGGGCGCCC ATGGCTGGCGGGTCA Ajs_3776 4008706 - 4007516 - | acetyl-CoA acetyltransferases aceK 4010532 - 4008703 - | bifunctional isocitrate dehydrogenase kinase/phosphatase protein Ajs_3778 4011232 - 4010570 - | carbonate dehydratase Ajs_3779 4012478 - 4011288 - | isovaleryl-CoA dehydrogenase Ajs_3780 4013018 - 4012608 - | MerR family transcriptional regulator Ajs_3782 4014548 - 4013322 - | transposase, mutator type TERM 3200 4013834 - 4013796 - G 74 -12.4 -3.53224 | CACCGCCTTGGGAAA GACGGCCTCAATGGCGTC AGG GAAGCCCTTGAGCCCATC GACGCAGGCGATGAA Ajs_3784 4014781 - 4015593 + | integrase catalytic subunit TERM 3201 4015756 - 4015718 - f 100 -21.9 -3.11222 | opp_overlap 4015722 4015723, overlap 4015723 GCTCAAGCCCAAAAG CAAAACGCCCTCCCACT GTGTT AGTGGGAGGGCGGTTTG GGCTGTAAGAGCCTG TERM 3202 4015722 - 4015752 + F 100 -17.6 -3.63627 | opp_overlap 4015718 4015723, overlap 4015723 AAGCCCAAAAGCAAA ACGCCCTCCCACTG TGT TAGTGGGAGGGCGG TTTGGGCTGTAAGAG TERM 3203 4015723 - 4015751 + F 91 -21.1 -2.77962 | opp_overlap 4015718 4015723, overlap 4015722 AGCCCAAAAGCAAAA CGCCCTCCCACTG TGT TAGTGGGAGGGCG GTTTGGGCTGTAAGA TERM 3204 4015751 - 4015723 - f 100 -20.4 -4.67641 | opp_overlap 4015723 4015722, overlap 4015718 AGCCCAAAAGCAAAA CGCCCTCCCACT GTGTT AGTGGGAGGGCG GTTTGGGCTGTAAGA TERM 3205 4018385 - 4018396 + F 72 -7.2 -4.2354 | AGGATCTATTTCACT CCCC TCCC GGGG TTCTTTTCGCCTTTC TERM 3206 4019192 - 4019175 - f 77 -4.1 -4.92757 | opp_overlap 4019163, overlap 4019170 CGATCAACAACAAAA CAGCCTC TCGC AAAGCTG CTTTGGTGTTGATTT TERM 3207 4021083 - 4021052 - f 82 -6 -4.87665 | gap 1, opp_overlap 4021040 4021057 4021059 4021062, overlap 4021053 4021054 CTTCACTCATAAAAA CG-GAATTGAAGTGA ACT TCACTTCTATTCTCA TGAGCGTTTGATAGT TERM 3208 4021255 - 4021266 + F 76 -5.8 -4.58283 | CCTGTCAAACTTTGT GGTC TTTC GACC TTTTTCACCAACTTC TERM 3209 4023185 - 4023170 - g 77 -3.9 -4.81734 | AAATACGAGCAAAAA CGAGC CAAAAC GCCCG TCAGATAAGCGCGAG TERM 3210 4023227 - 4023215 - g 95 -3.3 -5.64274 | overlap 4023223 GCAGCTACAAAAAAA GAAGC TAA GCTAC AAGGAGCAGCGCGAA Ajs_3785 4021542 - 4023428 + | ABC transporter related Ajs_3786 4024550 - 4023438 - | response regulator receiver modulated CheB methylesterase Ajs_3787 4025325 - 4024588 - | chemoreceptor glutamine deamidase CheD TERM 3211 4025107 - 4025095 - G 95 -5.5 -5.36441 | GTGCGAGACAAAAAA CTCGC CTG GCAAG ACCTTCACCGCGTTG Ajs_3788 4026258 - 4025365 - | MCP methyltransferase, CheR-type TERM 3212 4026329 - 4026351 + r 73 -3.3 -4.70659 | overlap 4026331 CCGGCCATGGCAAGG CCCATGTCC ATGCC GGCCATGAG TTTTTCGATGTCCAG Ajs_3789 4026795 - 4026307 - | CheW protein Ajs_3790 4028961 - 4026829 - | CheA signal transduction histidine kinases TERM 3213 4028502 - 4028556 + g 72 -12.9 -3.09516 | gap 3, opp_overlap 4028496 4028493 4028498 CAGCAACCACAGGCG CTGG-AGCGGGCGCCGCTGC-GGCGG GCGCTG CCGCTGGCA-CGGCGCCGGCCGCCAG TTCGCTGATGCGGCG TERM 3214 4028783 - 4028759 - G 73 -4.1 -4.64766 | opp_overlap 4028763, overlap 4028764 GCCACATCCGAAAAA CCGAAGGTGGC CGA GCCGCCCTTGA TGGAATGCGCGCAGC Ajs_3791 4029375 - 4029013 - | response regulator receiver protein Ajs_3792 4029890 - 4029444 - | hypothetical protein TERM 3215 4031049 - 4031012 - g 74 -7.6 -4.17556 | gap 1, overlap 4031013 GAGATGCGCAAGAAA CCCCGCTCCTTC-GGCC TGCAG GGCCTGCAGGAGCGCGC GCGGCGCGCGGGCGG Ajs_3793 4030040 - 4031161 + | response regulator receiver sensor signal transduction histidine kinase Ajs_3794 4031158 - 4031787 + | two component LuxR family transcriptional regulator Ajs_3795 4032656 - 4031886 - | flagellar biosynthetic protein FliR TERM 3216 4032564 - 4032516 - G 84 -7.2 -4.72986 | overlap 4032517 4032561 4032563 CACCGCCACCAAAAA GGCCAGCCCGATGCGCGTGCGC ACCGG GATCACGCGCATCGAGAACACC GGCGCCGACGTGAAC Ajs_3796 4032931 - 4032662 - | flagellar biosynthetic protein FliQ fliP 4033697 - 4032942 - | flagellar biosynthesis protein FliP Ajs_3798 4034067 - 4033690 - | flagellar biosynthesis protein, FliO Ajs_3799 4034509 - 4034060 - | flagellar motor switch protein FliN Ajs_3800 4035503 - 4034499 - | flagellar motor switch protein FliM Ajs_3801 4036091 - 4035519 - | flagellar basal body-associated protein FliL Ajs_3802 4037619 - 4036309 - | flagellar hook-length control protein Ajs_3803 4038086 - 4037622 - | flagellar export protein FliJ TERM 3217 4037655 - 4037686 + g 75 -4.9 -4.59342 | CGGGAAGCGTGCCCC CCGCCCGGCGCGC AACGCG GCGCGCTCATCGG TTTGTTTCTGCTCAC Ajs_3804 4039481 - 4038114 - | flagellar protein export ATPase FliI TERM 3218 4038225 - 4038195 - G 74 -5.3 -4.56597 | gap 1 GCTCTGCTGCAAAAA GGCGGTCATGCCCG GCTG CAGGCG-GATCGCC TCGTCCAGCTGCGGG Ajs_3805 4040241 - 4039507 - | flagellar assembly protein FliH TERM 3219 4040312 - 4040260 - R 82 -11.1 -4.04206 | gap 1 TCAGTCCTACACAAA GGCGTCGTCGCCGCCGCTGGCCAG CGCGAT CTGGCCCTCGTCGGCCAGG-CGCC GCACCGTCTTGAGGA Ajs_3806 4041246 - 4040251 - | flagellar motor switch protein FliG Ajs_3807 4042974 - 4041280 - | flagellar M-ring protein FliF TERM 3220 4041382 - 4041429 + g 77 -13.4 -3.61517 | gap 1, overlap 4041383 TTGTTCCGCCGTGGG CTGCAGCTCTTCGGGTTGCGCGG GCG CCG-GCAAGCCGGGGCGCTGCAA TTCTTCGGAGGCGAT TERM 3221 4041383 - 4041428 + g 80 -16.9 -2.76696 | gap 1, overlap 4041382 TGTTCCGCCGTGGGC TGCAGCTCTTCGGGTTGCGCGG GCG CCG-GCAAGCCGGGGCGCTGCA ATTCTTCGGAGGCGA TERM 3222 4042026 - 4042052 + g 77 -13.6 -3.5393 | CAGGCACGCCGGTCG GTGGCTGCGCGC CGG GCGTGCCGCCGC TTTCCACCACCTGCT TERM 3223 4042744 - 4042774 + g 70 -11 -3.50853 | overlap 4042745 4042747 AGGCACATTCATCTG CGACAGCTGCGCCA CGA TGGCGCCGCCGTCC TTGTCGTTCAGGCCG TERM 3224 4042745 - 4042773 + g 72 -14.5 -2.70298 | overlap 4042744 4042747 GGCACATTCATCTGC GACAGCTGCGCCA CGA TGGCGCCGCCGTC CTTGTCGTTCAGGCC TERM 3225 4043023 - 4042992 - H 83 -6.4 -4.82901 | gap 1, opp_overlap 4042991, overlap 4042994 GGTTTTCCACAAAAA GACGGGCGCCAG-GC GAG GCTCTGGCGTGCGGC GATTATGGAATCCGC TERM 3226 4043021 - 4042994 - H 70 -7.6 -4.03995 | gap 1, opp_overlap 4042991, overlap 4042992 TTTTCCACAAAAAGA CGGGCGCCAG-GC GAG GCTCTGGCGTGCG GCGATTATGGAATCC Ajs_3808 4043147 - 4043458 + | flagellar hook-basal body complex subunit FliE TERM 3227 4043570 - 4043548 - T 100 -11.3 -5.36441 | gap 1, opp_overlap 4043548 TTCGCATATAAAAAA GCCGGCCACC TTGC GGTG-CCGGC TTTTTGCGTTGCCCC TERM 3228 4043548 - 4043570 + T 100 -11.3 -4.74103 | gap 1, opp_overlap 4043548 TTCGCATATAAAAAA GCCGGCCACC TTGC GGTG-CCGGC TTTTTGCGTTGCCCC Ajs_3809 4043939 - 4043640 - | flagellar protein FliT Ajs_3810 4044367 - 4043942 - | flagellar protein FliS Ajs_3811 4045949 - 4044510 - | flagellar hook-associated 2 domain-containing protein TERM 3229 4045067 - 4045086 + g 100 -2.2 -5.77853 | TGAGGCCGTTATAGG CATTCA CAAAATCC TGAATG TTTTTTTTCAAGGTT TERM 3230 4046079 - 4046047 - R 100 -8.3 -5.32396 | overlap 4046048 ACAGCAAAAACAAAA TGCCGGAATGCCGCG CAA CACGGCACCCAGCCA AGCCGATTACCCCGA TERM 3231 4046077 - 4046048 - R 76 -10.7 -3.76997 | gap 1, overlap 4046047 CAGCAAAAACAAAAT GCCGGAATGCCGCG CAA CACGGCA-CCCAGC CAAGCCGATTACCCC Ajs_3812 4046982 - 4046143 - | flagellin domain-containing protein TERM 3232 4047003 - 4047019 + r 79 -13.7 -3.53012 | GCTCCTTGTTAAGCC CGACGGC ATC GCCGTCG TTTCCAGCGCCAGCC TERM 3233 4047202 - 4047183 - R 100 -10.7 -5.60993 | opp_overlap 4047183 TCGTCCATAAAAAAA CCCACGG CATATT CCGTGGG TTTTTGCCCGACCGC TERM 3234 4047183 - 4047202 + r 95 -10.7 -4.56597 | opp_overlap 4047183 TCGTCCATAAAAAAA CCCACGG CATATT CCGTGGG TTTTTGCCCGACCGC Ajs_3813 4048083 - 4047244 - | flagellin domain-containing protein TERM 3235 4048104 - 4048120 + r 79 -13.7 -3.53012 | GCTCCTTGTTAAGCC CGACGGC ATC GCCGTCG TTTCCAGCGCCAGCC TERM 3236 4048284 - 4048303 + r 95 -10.7 -4.56597 | opp_overlap 4048284 TCGTCCATAAAAAAA CCCACGG CATATT CCGTGGG TTTTTGCCCGACCGC TERM 3237 4048303 - 4048284 - R 100 -10.7 -5.60993 | opp_overlap 4048284 TCGTCCATAAAAAAA CCCACGG CATATT CCGTGGG TTTTTGCCCGACCGC Ajs_3814 4049181 - 4048345 - | flagellin domain-containing protein TERM 3238 4049386 - 4049427 + H 74 -2.7 -4.88288 | overlap 4049386 TAACTTTTTGCGACA TTCGACGGCGCGCGTCGGT ACTA GCCGACGGGCGAGGCGGAG TTTTCTCTTGTTTTG TERM 3239 4050137 - 4050155 + G 73 -13.8 -3.14468 | GGCGCTCACGCGGCT GGCCGGCG CCC TGCCGGCC TTCGGTATCGTGGCC TERM 3240 4050338 - 4050323 - g 70 -6 -4.25104 | GCTGCTGGAGCAAAA GGCCGC TGAC GCCGCC AAGGAATACGAGTGC Ajs_3815 4049628 - 4050488 + | MotA/TolQ/ExbB proton channel TERM 3241 4050598 - 4050562 - g 88 -16.5 -3.62522 | opp_overlap 4050581, overlap 4050550 4050597 CAAGCGCGCCAAGAA GCGCCCCCATGCGCCGC ACG GCGGCGCATGGAAGATC GCCTACGCCGACTTC TERM 3242 4051434 - 4051420 - g 72 -5.6 -4.36914 | opp_overlap 4051420 GCCCGTGGCAGAAAA GCAGGA CAA TCCAGC TTCCTCATCGCCGAA Ajs_3816 4050515 - 4051456 + | OmpA/MotB domain-containing protein TERM 3243 4051828 - 4051798 - g 73 -13.8 -3.18366 | overlap 4051796 4051794 4051799 CGCGCAAGGAAGACA TCGTCGCCGCCGCC CAG GGCGGCGCCGCCGG CTACATCGTCAAGCC TERM 3244 4051827 - 4051799 - g 79 -17.3 -2.50699 | overlap 4051796 4051798 4051794 GCGCAAGGAAGACAT CGTCGCCGCCGCC CAG GGCGGCGCCGCCG GCTACATCGTCAAGC Ajs_3817 4051518 - 4051904 + | response regulator receiver protein TERM 3245 4051937 - 4051924 - g 72 -5.2 -4.3739 | overlap 4051925 GACGGCGGCAGAAAA CGGC GCGCCA GCCG ACGGGGCAGACGACG Ajs_3818 4051907 - 4052536 + | chemotaxis phosphatase, CheZ TERM 3246 4052843 - 4052813 - g 79 -11.1 -3.89614 | gap 2, overlap 4052814 CGCAAGCTCCAGAAA GCGCGCAGCGACGGC CAG GCCG-CGC-GCTCGC GGGACCTGTCGCACC TERM 3247 4053042 - 4053095 + G 72 -13 -3.09492 | CCAGCGCCAGCTTCG CCGCGCTCACCGGCG-GCGCGGCGCT GCTG AGCGCCGTGGGCGCCGGCG-GCTGGG TCTTCAGCTTCAAGC Ajs_3819 4052759 - 4053931 + | type III secretion exporter Ajs_3820 4053928 - 4056012 + | flagellar biosynthesis protein FlhA Ajs_3821 4056009 - 4057601 + | GTP-binding signal recognition particle TERM 3248 4057936 - 4057956 + G 79 -11.1 -3.91716 | opp_overlap 4057926 4057923 CACCATGGCGCCGCC GTGCTGCAG CGC CTGCAGCCC TTGTTTCGCGCCTAC TERM 3249 4058033 - 4058005 - g 86 -18.1 -3.14132 | GCGCCGCCCGAGCAA CTGGCGCCGCTGC TGC GCGGCAGCGCCAG CGTACCGCTGATCAT Ajs_3822 4057591 - 4058388 + | hypothetical protein TERM 3250 4058534 - 4058590 + G 78 -13.8 -3.53012 | opp_overlap 4058545 CAGGTCGGCATGATC GGTCT-GAACGACGCGCTCTCGCGCTAC GAA GTCGCGC-AGGGCGTGCAGTTCGAGACC TTTGCCAGCCAGCGC Ajs_3823 4058393 - 4059106 + | FliA/WhiG family RNA polymerase sigma factor TERM 3251 4059121 - 4059158 + T 100 -12.2 -5.81032 | gap 1, opp_overlap 4059121 ATTCTTTGGATGAAA TAGCTGTTTTGCGCTTG CTGGA CAAGCGC-GAGCAGCTA TTTTTTTTGAGCTTG TERM 3252 4059307 - 4059265 - T 82 -3.5 -5.18357 | gap 2, overlap 4059267 4059269 GAACCCATCAAAAAA GA-TAGCTGCCAG-CGCTTAT CCC ATAAGCCTCAGGCAGCAACTC GGGCTAAAAGTCACC Ajs_3824 4059674 - 4059318 - | hypothetical protein Ajs_3825 4060045 - 4059722 - | anti-sigma-28 factor, FlgM TERM 3253 4059888 - 4059943 + g 89 -17.4 -3.61398 | gap 1, overlap 4059930 TCCACCCCGCGAGCG GCGGCCGACAGCGTGACGGGCAC-GCC TGC GGCGGCGCGCGTCGCGCCCTGGGCCGC TTCTTCAGCGGCCGG Ajs_3826 4060891 - 4060139 - | SAF domain-containing protein Ajs_3827 4061078 - 4061533 + | flagellar basal-body rod protein FlgB TERM 3254 4061635 - 4061693 + G 72 -14.5 -2.73875 | opp_overlap 4061635 4061683, overlap 4061668 CGTCGTGGCCAGCAA CCTGGC-CAACGTGGACGCCGTGGCCGGC CCC GACGGCCA-GGCGTACAAGGCGCGCCAGG TGGTCTTCCAGACCG TERM 3255 4061693 - 4061635 - g 81 -16.7 -3.14132 | opp_overlap 4061635 4061668, overlap 4061683 CGTCGTGGCCAGCAA CCTGGC-CAACGTGGACGCCGTGGCCGGC CCC GACGGCCA-GGCGTACAAGGCGCGCCAGG TGGTCTTCCAGACCG Ajs_3828 4061555 - 4061959 + | flagellar basal-body rod protein FlgC Ajs_3829 4061981 - 4062631 + | flagellar hook capping protein TERM 3256 4062900 - 4062923 + G 73 -3.7 -4.59773 | overlap 4062902 ACGGGCAACAGCCTG GACGTGGCC ATCAAC GGCAACGGC TTTTTCACGCTGCAG Ajs_3830 4062660 - 4064276 + | hypothetical protein Ajs_3831 4064303 - 4065043 + | flagellar basal-body rod protein FlgF TERM 3257 4065215 - 4065205 - g 72 -6.8 -4.2828 | CCTGATCTACCAAAA CCTG CGC CAGG TCGGCAGCCAGACCA Ajs_3832 4065062 - 4065844 + | flagellar basal-body rod protein FlgG Ajs_3833 4065868 - 4066584 + | flagellar L-ring protein Ajs_3834 4066585 - 4067565 + | hypothetical protein flgI 4067743 - 4068867 + | flagellar basal body P-ring protein Ajs_3836 4068920 - 4069894 + | flagellar rod assembly protein/muramidase FlgJ TERM 3258 4071372 - 4071397 + G 72 -8.3 -4.11216 | opp_overlap 4071351, overlap 4071369 4071359 CCCGCCAGCCGAGAC CGTCGCCAATG GTCT TGTTGGCGATG TTTTGCGCATCCCGC Ajs_3837 4069921 - 4071996 + | flagellar hook-associated protein FlgK Ajs_3838 4072008 - 4073270 + | flagellar hook-associated protein 3 Ajs_3839 4073359 - 4074570 + | putative signal transduction protein Ajs_3840 4074587 - 4076047 + | sodium:neurotransmitter symporter TERM 3259 4077199 - 4077164 - g 70 -13.2 -3.06302 | gap 1 ATCACGGCCATCGAA CCCGCGGGCGA-GCGGC TGC GCCGCATCGCCGCCGAG GCCGCCGCACACCTG Ajs_3841 4076186 - 4077706 + | 2-nitropropane dioxygenase, NPD Ajs_3842 4079213 - 4077756 - | GntR family transcriptional regulator TERM 3260 4078961 - 4078976 + g 70 -3.9 -4.57073 | TCAGCGCTTGCCCAT CGGGC GTCGGA GCCTG TTTTTGCACAAAATC Ajs_3843 4079358 - 4079957 + | hypothetical protein TERM 3261 4080682 - 4080735 + G 71 -15.2 -2.66451 | overlap 4080680 4080694 4080721 4080723 GCTGCCCGTATCGCT GCCGCTGGCC-TGGCTGGCATGGCCG CAGG CGGCGGTGCCTGCCGCGGCCTG-GGC TGGCTTTGCCTACGT TERM 3262 4080694 - 4080739 + G 70 -10.4 -3.6682 | gap 3, overlap 4080682 4080680 4080721 4080723 GCTGCCGCTGGCCTG GCTGGCAT-GGCCGCAGGC-GGC GGT GCCTGCC-GCGGCCTGGGCTGGC TTTGCCTACGTGGCG Ajs_3844 4080026 - 4080970 + | hypothetical protein Ajs_3845 4081034 - 4082314 + | GntR family transcriptional regulator Ajs_3846 4082428 - 4083303 + | PhzF family phenazine biosynthesis protein Ajs_3847 4083300 - 4084274 + | hypothetical protein TERM 3263 4085276 - 4085249 - g 76 -8.4 -4.25104 | gap 1 CGGCGGCGACGAAAA GCTGCTG-CAGTG GAT CACCGACAGCGGC ATCGCCGCGCTGATC Ajs_3848 4084452 - 4085540 + | hypothetical protein TERM 3264 4086386 - 4086369 - g 72 -4.8 -4.45068 | ACGGGCAAGAACAAA CAGACC CTGGCC GGCCTG CTCATGTACATCAAC Ajs_3849 4085574 - 4086752 + | putative UreA/short-chain amide ABC transporter TERM 3265 4086929 - 4086947 + F 74 -12.4 -3.51976 | overlap 4086925 GCGTTGCCAAGCCTC GCTGGGGT AGC GCCCCAGC TTCGTTTGGCGCCTT TERM 3266 4086963 - 4086973 + F 72 -2.4 -4.72272 | overlap 4086951 4086950 TTCGTTTGGCGCCTT GCGC CTG GCCC TTTTTGATCGCAACG Ajs_3850 4087098 - 4088219 + | short-chain dehydrogenase/reductase SDR Ajs_3851 4088280 - 4088951 + | phosphoglycerate mutase Ajs_3852 4089886 - 4089017 - | creatininase TERM 3267 4090182 - 4090218 + G 70 -10.7 -3.53012 | CGACGCGGTCACAGC GCGCATCGACTGGGAGC GCC GCCACCGGCTGATGCGC TTTCACACCACCACG TERM 3268 4090622 - 4090605 - g 79 -4 -4.91459 | overlap 4090606 CAAGATCGAGAAAAA GGGCGC CATGTC GCGCCG CGTGGTGCTGGGCTT Ajs_3853 4089895 - 4090647 + | metal-dependent hydrolases related to alanyl-tRNA synthetase TERM 3269 4090821 - 4090803 - g 70 -10.2 -3.71686 | overlap 4090804 TTCAACTCAAGACAA CCGCCGCC GCG GGCAGCAG CAGCGTCGTCACGCC TERM 3270 4091230 - 4091206 - g 72 -14.3 -3.03124 | GTGCATCCCCGAAGA GGGCAGCTTCA CGC TGCAGCTGCCC TTGCGCGGCACGACG TERM 3271 4092582 - 4092638 + G 72 -12.9 -3.14602 | overlap 4092614 TGGCCGGCGTGACAT CCTGGCAGCCCTGGCGCC-CTGGCCTG GCCGA CGAGCTGGTGGC-CCAGGGCCGCCCGG TGTTCGTGGACTACA TERM 3272 4092784 - 4092826 + G 70 -13.2 -2.95298 | overlap 4092786 4092808 GCGCGACCCCGCCAT CACCGCCGCGCTGGCGCAGC TCG GCCGCAGCGGCGTGCCGGTG TATGTGCTGCATGCG Ajs_3854 4090700 - 4092916 + | cytochrome c biogenesis protein, transmembrane region Ajs_3855 4093963 - 4092917 - | hypothetical protein TERM 3273 4093797 - 4093751 - G 78 -14.3 -3.57561 | gap 1 GGCCAACTGCTCAAA CCGCCAGCGCTCCAGCGTCGGG TAGT CCCG-CGCCAGCGCGTCGACGG GCTCGCTGCTGCCCA Ajs_3856 4094145 - 4095395 + | Na+/H+ antiporter NhaA TERM 3274 4095511 - 4095549 + G 74 -12.5 -3.53444 | TGCCACACCATCGCC GTGG-TGGGCCTGTCGCCG CAA TGGC-ACCGGCCCAGCCAC TTTGCCGCCAAGTAC Ajs_3857 4095445 - 4095960 + | CoA-binding domain-containing protein Ajs_3858 4096015 - 4097340 + | O-acetylhomoserine/O-acetylserine sulfhydrylase Ajs_3859 4098376 - 4097393 - | integral membrane protein TerC Ajs_3860 4098504 - 4099430 + | LysR family transcriptional regulator Ajs_3861 4099532 - 4100644 + | uroporphyrinogen decarboxylase TERM 3275 4101174 - 4101192 + F 73 -8.8 -4.08692 | overlap 4101164 GCCGGGGCGCGCCCC GCAGCCTG TTG CACGCTGC TTTTCAACAAAGTTA TERM 3276 4101252 - 4101277 + G 72 -8.9 -4.07568 | gap 1, opp_overlap 4101250, overlap 4101251 GCTTGTGGAATCATG CG-GGGCCGCGC CCC GTGCCGCCCGCG TTTTCACCCACCGCC TERM 3277 4101777 - 4101742 - g 79 -4 -4.89339 | gap 1, overlap 4101745 AAGCAGTTACAAAAA CAATAGCACTTACC-GC AGA ACAGGCAAGCGCTACAG CCCAAATCGATGCAG TERM 3278 4101774 - 4101745 - g 76 -6.5 -4.5448 | gap 1, overlap 4101742 CAGTTACAAAAACAA TAGCACTTACC-GC AGA ACAGGCAAGCGCTA CAGCCCAAATCGATG Ajs_3862 4101249 - 4103468 + | primosomal protein N' TERM 3279 4103479 - 4103499 + F 95 -10.3 -4.4009 | overlap 4103480 TCTGAGGCCGCCACC GCTGCGGGC GGT GCCCGCGGG TTTTCTCGCATGGCA TERM 3280 4103480 - 4103498 + F 76 -13.8 -3.23733 | overlap 4103479 CTGAGGCCGCCACCG CTGCGGGC GGT GCCCGCGG GTTTTCTCGCATGGC TERM 3281 4103546 - 4103562 + F 93 -3.6 -5.66926 | overlap 4103547 GGCAAAGTTCCGCCC CCGGTC CACGA GACCGC TTTTCTTTTTTTTGG Ajs_3863 4103607 - 4104707 + | L-asparaginases, type II Ajs_3864 4105872 - 4104916 - | auxin efflux carrier Ajs_3865 4106049 - 4108118 + | UvrD/REP helicase Ajs_3866 4108123 - 4108557 + | hypothetical protein TERM 3282 4108837 - 4108798 - g 75 -15.6 -2.78384 | gap 1 GGGCCGGCGAGCAGA GCTGGC-AGGCGCCGCCCG CTT CGGCCAGCGCCCAGCCCGC CGCCGCCACGCAGGC Ajs_3867 4108563 - 4109780 + | phospholipase A1 TERM 3283 4109931 - 4109896 - f 83 -14.6 -3.48395 | gap 1, overlap 4109897 AGTGCGCCGACACAA TCGGGCGCA-CCCCGGC GCC GCCGGGGGCGGGCCCGC GCCCTGCGCAATAAG TERM 3284 4109930 - 4109897 - f 86 -18.1 -2.68823 | gap 1, overlap 4109896 GTGCGCCGACACAAT CGGGCGCA-CCCCGGC GCC GCCGGGGGCGGGCCCG CGCCCTGCGCAATAA Ajs_3868 4110022 - 4110408 + | hypothetical protein TERM 3285 4110451 - 4110474 + T 100 -16.8 -4.02334 | opp_overlap 4110451 4110454, overlap 4110454 CTTGATTCAATAGCA CAACGGGTCC CGCG GGACCCGTTG TTTCTGGTGTCAGTC TERM 3286 4110474 - 4110451 - T 81 -16.8 -2.75992 | opp_overlap 4110451 4110454, overlap 4110454 CTTGATTCAATAGCA CAACGGGTCC CGCG GGACCCGTTG TTTCTGGTGTCAGTC TERM 3287 4110471 - 4110454 - T 76 -12.7 -3.52787 | opp_overlap 4110451 4110454, overlap 4110451 GATTCAATAGCACAA CGGGTCC CGCG GGACCCG TTGTTTCTGGTGTCA TERM 3288 4110454 - 4110471 + T 89 -12.7 -4.1337 | opp_overlap 4110454 4110451, overlap 4110451 GATTCAATAGCACAA CGGGTCC CGCG GGACCCG TTGTTTCTGGTGTCA Ajs_3869 4110972 - 4110484 - | UspA domain-containing protein Ajs_3870 4111075 - 4112247 + | queuine tRNA-ribosyltransferase TERM 3289 4112267 - 4112309 + F 71 -13.4 -2.57468 | gap 2, overlap 4112266 4112269 GCGTAGGCGGCGGCT GACGGCGAGG-GCCG-GCGC ATTCC GCGCGCGGCGCCGCGCCATC CTTCCTATGCTGGGG Ajs_3871 4112327 - 4112938 + | hypothetical protein Ajs_3872 4114234 - 4113074 - | hypothetical protein TERM 3290 4113615 - 4113626 + g 70 -3.6 -4.56597 | ACGAACGGCCACCAG GTGC TCTT GCGC TTTTTGGCGAACAGC Ajs_3873 4115113 - 4114313 - | hypothetical protein Ajs_3874 4115574 - 4115116 - | hypothetical protein Ajs_3875 4116206 - 4115598 - | hypothetical protein TERM 3291 4116203 - 4116187 - G 81 -10.9 -4.09864 | ATCCAGCGGCGAAAA GTATCGC CAT GCGATAC CACATTCAGATCGCC Ajs_3876 4116784 - 4116209 - | AsnC family transcriptional regulator TERM 3292 4116683 - 4116700 + g 100 -2.6 -5.7946 | CTCAGCGCCCTCTAC CGCGGC ATTCAC GTTGCG TTTTTTTATTGCGGC TERM 3293 4117809 - 4117854 + G 100 -14.8 -4.85782 | opp_overlap 4117806 GGCCGGATCGAAGGT GCTGTACGCGCATCTGGG-CGG CGTG CCGGCCCTGAA-CGCGTACAGC TTTCTTTTTCGCAAC Ajs_3877 4116805 - 4117875 + | 1-aminocyclopropane-1-carboxylate deaminase Ajs_3878 4119870 - 4117915 - | phospholipid/glycerol acyltransferase TERM 3294 4118116 - 4118142 + g 72 -13.6 -3.137 | overlap 4118109 4118107 CATGGGCACCACCGG CGCCCGCACGCC GTC GGCCTGCGCGCG TTCGATGATCTTCAT TERM 3295 4119969 - 4119985 + H 81 -6.6 -4.74103 | TGAATCACACTTAGG GTATCG CCATT CGATAC TTTTTACGTTCCACG TERM 3296 4120268 - 4120256 - g 73 -6.2 -4.32034 | GCAGGAGCAGGAAAA GGCC GTGGT GGCC GACAAGAAGCTGCTG Ajs_3879 4120005 - 4120748 + | XRE family transcriptional regulator Ajs_3880 4121207 - 4120767 - | alcohol dehydrogenase TERM 3297 4120827 - 4120813 - G 72 -5.6 -4.35581 | overlap 4120814 TTAAAACACCCAAAA CCCGAC GCA GTCGGC CTGCCATTGACTTCC Ajs_3881 4121640 - 4121233 - | hypothetical protein TERM 3298 4121776 - 4121729 - H 82 -14.7 -3.39142 | gap 1, opp_overlap 4121738 4121745, overlap 4121730 GGTACATGCAAGCAA TCGTGGCGTGGCG-GGCGGTGC GCCAA GCACCGCGGCGCCTCGCCGCGC ACTGGTCGCGCCTCT TERM 3299 4121775 - 4121730 - H 86 -18.2 -2.63164 | gap 1, opp_overlap 4121738 4121745, overlap 4121729 GTACATGCAAGCAAT CGTGGCGTGGCG-GGCGGTGC GCCAA GCACCGCGGCGCCTCGCCGCG CACTGGTCGCGCCTC Ajs_3882 4122003 - 4122419 + | hypothetical protein Ajs_3883 4122586 - 4123572 + | hypothetical protein TERM 3300 4124541 - 4124501 - g 71 -12.6 -3.29471 | gap 2, opp_overlap 4124507 4124533 CCGCCATTACATCAA CGTGCAGCAGGTGCCGCCGC CGC ACGGCAGCAC--GCTGCGCG TGTCGCGGCACGCCC Ajs_3884 4123605 - 4125083 + | FAD dependent oxidoreductase TERM 3301 4126040 - 4125994 - g 90 -18.7 -3.14344 | gap 1, opp_overlap 4125997 CAGCGCCGGCACCAA CGCCCGCGAACGC-GCCCTGGC GCAG GCCAGCGCCGCGCTCACGCGCG CGCCCGGTGCATTCG Ajs_3885 4125080 - 4126189 + | uncharacterized peroxidase-related enzyme Ajs_3886 4126566 - 4127876 + | D-amino-acid dehydrogenase TERM 3302 4127957 - 4127945 - T 72 -7.7 -4.13014 | overlap 4127955 GCTAGAGGCCCAAAA GGCTT ATA AAGCC CCGTCCGGCGCGACG Ajs_3887 4129213 - 4127948 - | hypothetical protein TERM 3303 4128188 - 4128137 - G 79 -16.5 -2.95884 | gap 1, opp_overlap 4128173, overlap 4128139 4128151 CGAGCAACTCACATA CAGCGCACCGCA-AATGCGCCGGC CGCCC GCCGGCTCGGCATGCGGCGCGCTG CCTGCGGCGGGCAGC TERM 3304 4128186 - 4128139 - G 70 -13.3 -3.03006 | gap 1, opp_overlap 4128173, overlap 4128137 4128151 AGCAACTCACATACA GCGCACCGCA-AATGCGCCGGC CGCCC GCCGGCTCGGCATGCGGCGCGC TGCCTGCGGCGGGCA TERM 3305 4129264 - 4129290 + r 100 -15.1 -4.18197 | GCAGCTCAGCCTGCC GGCCGCCGCGT GCGGG ACGCGGCAGCC TTTTGGGTGGGCGAT Ajs_3888 4130225 - 4129254 - | hypothetical protein TERM 3306 4129426 - 4129464 + g 81 -12.3 -3.86822 | gap 1, overlap 4129428 TTGGCCTTGTCGTTG GCCTTGCCGCCCGGTTGG GTCG CCGGCCGGGCGGCC-GCC TTTGTGGAAGGCTTG TERM 3307 4130319 - 4130332 + H 71 -5.9 -4.36914 | overlap 4130318 GTACCGTCCACAGGC CCGCG ATAG CGTGG TTTTCTCGCGCAAAC TERM 3308 4130507 - 4130484 - g 76 -5.9 -4.56597 | gap 1, overlap 4130486 4130499 4130500 CGCTCCGGTGAAAAA GACCGCCGCC AAAAA GGCTGCGG-C ACCTGCCAAGAAGGC TERM 3309 4130506 - 4130486 - g 73 -9.6 -3.90048 | overlap 4130484 4130499 4130500 CTCCGGTGAAAAAGA CCGCCGCC AAAAA GGCTGCGG CACCTGCCAAGAAGG TERM 3310 4130535 - 4130499 - g 74 -5.6 -4.57073 | overlap 4130486 4130484 4130500 4130520 4130521 4130524 GACCGCCGCCAAAAA GGCTGCGGCACCTGCC AAGAA GGCAGCCGCCCCCGCA GCTCCTGCTGCCATC Ajs_3889 4130446 - 4130865 + | histone family protein DNA-binding protein TERM 3311 4130892 - 4130907 + T 100 -10.4 -5.60993 | opp_overlap 4130892 4130895 GGGTTTCGCAAAAAA GCAGCC TCCG GGCTGC TTTTTTTATACCCGA TERM 3312 4130907 - 4130892 - T 100 -10.4 -5.00616 | opp_overlap 4130892, overlap 4130895 GGGTTTCGCAAAAAA GCAGCC TCCG GGCTGC TTTTTTTATACCCGA Ajs_3890 4131703 - 4130951 - | protein tyrosine/serine phosphatase TERM 3313 4131886 - 4131875 - R 74 -5.8 -4.41348 | TGGCTCCCAAAGAAA GGAC TACC GTCC CGCGAAAGAAACAAG TERM 3314 4132018 - 4131997 - R 100 -15.9 -5.38054 | opp_overlap 4131997 GTGCAGAAACAAAAA CGCCCAACC GAGT GGTTGGGCG TTGTATGTGGTGGCC TERM 3315 4131997 - 4132018 + r 86 -15.9 -3.61902 | opp_overlap 4131997 GTGCAGAAACAAAAA CGCCCAACC GAGT GGTTGGGCG TTGTATGTGGTGGCC Ajs_3891 4132863 - 4132165 - | two component Fis family transcriptional regulator Ajs_3892 4135188 - 4132900 - | multi-sensor signal transduction histidine kinase TERM 3316 4135124 - 4135078 - G 73 -13.1 -3.24902 | gap 2, opp_overlap 4135114 4135123, overlap 4135071 GAACAGCAGCACCAA TGCGATGGCGCACATCAGCCCCG TGC CGAGGCCCA-GCGC-CCATCGCA CAGCGCGTGCGCGTG Ajs_3893 4135856 - 4135185 - | hypothetical protein Ajs_3894 4137180 - 4135807 - | sun protein TERM 3317 4136454 - 4136398 - GR 84 -13.6 -3.68569 | overlap 4136395 GCAGGCATCCAATAA GCGCAG-CGGCTGCGCGGCGTCCAGCCC GTT GAGCAGCA-GCGGCGCCGCCATCTGCGC GGCGGCATCCTGCAC TERM 3318 4136592 - 4136603 + gr 77 -3.6 -4.74103 | overlap 4136573 ACGCTTGCTGGTAAA GCGC TGGA GTGC TTTTTGACTTAGAAA Ajs_3895 4137755 - 4137177 - | hypothetical protein TERM 3319 4137860 - 4137821 - R 100 -17.3 -5.36965 | gap 1, opp_overlap 4137823, overlap 4137825 TAACACGACAAAAAA GAA-ACTCCCGGCCTGCC GGATG GGCAAGCCGGGAGCGTTC AGTACCCGCATGCGA TERM 3320 4137855 - 4137825 - R 100 -20.5 -5.1471 | opp_overlap 4137823, overlap 4137821 ACGACAAAAAAGAAA CTCCCGGCCTGCC GGATG GGCAAGCCGGGAG CGTTCAGTACCCGCA Ajs_3896 4142125 - 4137896 - | DNA-directed RNA polymerase subunit beta' TERM 3321 4142215 - 4142233 + r 100 -10.3 -5.02074 | GCAAACCCAGAGGGA GTGAGCG CCAGC CGCTCAC TTTTTTAAAAACTCG Ajs_3897 4146380 - 4142256 - | DNA-directed RNA polymerase, beta subunit TERM 3322 4144242 - 4144254 + g 75 -9.1 -4.07568 | GCGCTCGATACCCGT GCCCA CCA TGGGC TTTTCGGGACGCAGC TERM 3323 4145201 - 4145181 - G 81 -11.1 -4.07568 | GTCGGGGTTGTAAAA CAGGCGCTG GAA CAGGGCCTG CACGGCATCCTCGGT TERM 3324 4145522 - 4145544 + g 77 -13.4 -3.50853 | ACTGCTCCAGCTCAC GCGTGTGGCG CGC CGTCACGCGC TTGTCCTTGGCCACA TERM 3325 4146637 - 4146608 - R 95 -16.5 -3.86944 | opp_overlap 4146608 CCCATAAGCACCAAA GGCTGGAGGCCTT TTGC AAGACCCCCAGCC CAGGAGACAAGGTCG Ajs_3898 4147034 - 4146654 - | 50S ribosomal protein L12P Ajs_3899 4147590 - 4147084 - | 50S ribosomal protein L10P rplA 4148529 - 4147834 - | 50S ribosomal protein L1 TERM 3326 4148490 - 4148503 + g 73 -3.7 -4.5774 | overlap 4148487 4148491 TGGTAGAGTCCACCT TGCCC TGCA GGGCC TTTTGCTTCTTGGTC Ajs_3901 4148961 - 4148530 - | 50S ribosomal protein L11P Ajs_3902 4149661 - 4149071 - | transcription antitermination protein nusG secE 4150044 - 4149661 - | preprotein translocase subunit SecE TERM 3327 4150084 - 4150110 + r 100 -16.6 -4.63486 | opp_overlap 4150081 4150080 4150078, overlap 4150087 GCCTTACAAGACGCC GAAGCCCGCCAG GGG CTGGCGGGCTTG TTTTATTACCACCCT TERM 3328 4150087 - 4150107 + r 100 -18.3 -4.43307 | opp_overlap 4150081 4150080 4150078, overlap 4150084 TTACAAGACGCCGAA GCCCGCCAG GGG CTGGCGGGC TTGTTTTATTACCAC Ajs_3904 4151411 - 4150221 - | elongation factor Tu TERM 3329 4150262 - 4150292 + g 70 -9.8 -3.67775 | gap 2, opp_overlap 4150244 CGGCGCCCACGGTAC GGCC-GC-CTTCGC GGATA GCGAAGCGCAGGCC TTCTTCCATGGCGAT Ajs_3905 4152029 - 4152352 + | transposase IS3/IS911 family protein TERM 3330 4153123 - 4153109 - T 71 -5.6 -4.2803 | GAGCGCAATGGAAAA CCAAGG AGG CCGTGG AGTTCGCAACGCTCG TERM 3331 4153484 - 4153446 - T 100 -21.9 -3.16068 | opp_overlap 4153450 4153451, overlap 4153451 CGTGCAAGCCAAAAG CAAAACGCCCTCCCACT GTTGT AGTGGGAGGGCGGTTTG GGCTGTAAGAGCCTG TERM 3332 4153450 - 4153480 + T 100 -17.6 -3.63627 | opp_overlap 4153446 4153451, overlap 4153451 CAAGCCAAAAGCAAA ACGCCCTCCCACTG TTG TAGTGGGAGGGCGG TTTGGGCTGTAAGAG TERM 3333 4153451 - 4153479 + T 91 -21.1 -2.77962 | opp_overlap 4153446 4153451, overlap 4153450 AAGCCAAAAGCAAAA CGCCCTCCCACTG TTG TAGTGGGAGGGCG GTTTGGGCTGTAAGA TERM 3334 4153479 - 4153451 - T 100 -20.4 -4.69549 | opp_overlap 4153451 4153450, overlap 4153446 AAGCCAAAAGCAAAA CGCCCTCCCACT GTTGT AGTGGGAGGGCG GTTTGGGCTGTAAGA TERM 3335 4156113 - 4156124 + T 72 -7.2 -4.2354 | AGGATCTATTTCACT CCCC TCCC GGGG TTCTTTTCGCCTTTC TERM 3336 4156920 - 4156903 - T 77 -4.1 -4.92757 | opp_overlap 4156891, overlap 4156898 CGATCAACAACAAAA CAGCCTC TCGC AAAGCTG CTTTGGTGTTGATTT TERM 3337 4158811 - 4158780 - T 82 -6 -4.87665 | gap 1, opp_overlap 4158768 4158785 4158787 4158790, overlap 4158781 4158782 CTTCACTCATAAAAA CG-GAATTGAAGTGA ACT TCACTTCTATTCTCA TGAGCGTTTGATAGT TERM 3338 4158983 - 4158994 + T 76 -5.8 -4.58283 | CCTGTCAAACTTTGT GGTC TTTC GACC TTTTTCACCAACTTC Ajs_3907 4160162 - 4159212 - | glutathione synthetase Ajs_3908 4161406 - 4160198 - | benzoate transporter Ajs_3909 4163378 - 4161510 - | K+ potassium transporter TERM 3339 4162191 - 4162173 - G 70 -6.6 -4.17309 | CACGACAAAGAAGAA GCCCGTGG TGG CCACGCAC AGCGCCAGCGGATAG Ajs_3910 4164814 - 4163519 - | glutamate--cysteine ligase Ajs_3911 4166345 - 4164879 - | cation transporter trkA 4167815 - 4166361 - | potassium transporter peripheral membrane component Ajs_3913 4169160 - 4167880 - | gamma-glutamyl phosphate reductase TERM 3340 4169011 - 4169062 + g 82 -6.4 -4.7497 | gap 1 GGCATTGTCCCCCTG CAGGGCG-TCCACGTTCTGGCGCAG CAG CCGCGCCAGGGCCAGCAATGCCTTG TTTTTGATAGCTGCC TERM 3341 4169077 - 4169105 + g 75 -4.5 -4.65895 | gap 2, overlap 4169078 GTTTTTGATAGCTGC CGGCGCGCGCGCC ATTTG GGCG-GAG-GCCG TTTTTGCCTGCAAAC Ajs_3914 4169251 - 4169544 + | hypothetical protein holA 4170647 - 4169601 - | DNA polymerase III subunit delta Ajs_3916 4171230 - 4170721 - | rare lipoprotein B Ajs_3917 4173976 - 4171244 - | leucyl-tRNA synthetase TERM 3342 4173021 - 4173034 + g 79 -3.7 -4.8622 | opp_overlap 4173014 4173016 GTGACGAACAGGCCC GTGGG CATG CCCTC TTTTTCCTTCAGGGC Ajs_3918 4174129 - 4175217 + | transposase, IS4 family protein Ajs_3919 4175445 - 4176725 + | MscS mechanosensitive ion channel TERM 3343 4176747 - 4176729 - T 88 -7.4 -4.82901 | opp_overlap 4176732 4176734 4176734, overlap 4176734 GCGTTGCCATAAAAA CAAGAGCT GCC AGCGCTTG CCAGCTGGCGCTTTC Ajs_3920 4177250 - 4176810 - | biopolymer transport protein ExbD/TolR Ajs_3921 4177924 - 4177265 - | MotA/TolQ/ExbB proton channel TERM 3344 4177764 - 4177721 - G 72 -11.7 -3.57144 | gap 3 CCCTTCACGGTCAAA GGC-GG-GCAGACGCTCGGCCG CCG CGGCC-AGCGACGGCGCCTGCC AGAACGCGGCCGTGC Ajs_3922 4178753 - 4177932 - | dihydrodipicolinate reductase TERM 3345 4178009 - 4177967 - G 70 -13.3 -3.06315 | gap 1, opp_overlap 4177992, overlap 4177992 CGAACATGTCGAACA GGCCCGCGCGCTGCGTGGCC AGGA AGCC-CACCGCGCGCAGGCT GCCCTGGGCGTAGCC Ajs_3923 4179381 - 4178830 - | SmpA/OmlA domain-containing protein TERM 3346 4179349 - 4179330 - G 77 -10.6 -3.77119 | overlap 4179331 CACCAATCAACACAA TGGCGCCC CAGC GGGCGCCC CAACGGGCGGGTGCA TERM 3347 4179348 - 4179331 - G 71 -14.1 -2.85548 | overlap 4179330 ACCAATCAACACAAT GGCGCCC CAGC GGGCGCC CCAACGGGCGGGTGC Ajs_3924 4179450 - 4179899 + | ferric uptake regulator family protein Ajs_3925 4180869 - 4179913 - | HPr kinase/phosphorylase Ajs_3926 4181358 - 4180891 - | PTS IIA-like nitrogen-regulatory protein PtsN TERM 3348 4181440 - 4181424 - R 100 -10.8 -5.45652 | ACTGGCAACAAAAAA CCGCCC TGGCT GGGCGG TTGCGGCACCGCCGG Ajs_3927 4181845 - 4181492 - | SSU ribosomal protein S30P / sigma 54 modulation protein TERM 3349 4181682 - 4181693 + g 84 -7.2 -4.72729 | TGCACGGTGCATTCA GCGC GCTG GCGC TTTTCCTTTTCCTTC TERM 3350 4181895 - 4181878 - H 78 -6.9 -4.64766 | overlap 4181880 CTCACAGTTGAAAAA CACCGCC CCTT GCCGGTG CGGGGCGGTCTGCGA TERM 3351 4181903 - 4181880 - H 71 -8.1 -3.93817 | overlap 4181878 CACAGTTGAAAAACA CCGCCCC TTGCCGGTGC GGGGCGG TCTGCGAACGTGAAT Ajs_3928 4182222 - 4183142 + | phosphoribosylaminoimidazole-succinocarboxamide synthase TERM 3352 4183145 - 4183191 + T 73 -13.2 -3.1505 | gap 4 CCTGACCGCCTGATT GC-TTGCGCGACGCCCCTGGCCGG GGA TCGGCC-GGGG-GTCGC-CAACGC TTGCTCAGAACTGGT Ajs_3929 4185304 - 4183196 - | TonB-dependent siderophore receptor TERM 3353 4184237 - 4184198 - G 71 -9.2 -3.83998 | gap 1, overlap 4184201 CCAGCTCACACCAAA CAG-CGCCTCGTGCTGCCG TCC CAGCATCTCGAAGCGACCG TTGACGGTGGCGGTG TERM 3354 4185405 - 4185415 + r 80 -5.4 -4.83615 | CCGCGATGCACGCAT CAGA ACT TCTG TTTTTGTAGCGGCTG TERM 3355 4185506 - 4185496 - R 72 -2.4 -4.72272 | overlap 4185497 4185498 CGTTGCGATCAAAAA GGGC CAG GCGC AAGGCGCCAAACGAA TERM 3356 4185540 - 4185522 - R 83 -14.6 -3.51976 | overlap 4185518 AAGGCGCCAAACGAA GCTGGGGT GCT ACCCCAGC GAGGCTTGGCAACGC Ajs_3930 4186610 - 4185786 - | protein of unknown function DUF306, Meta and HslJ Ajs_3931 4187560 - 4186652 - | thioredoxin Ajs_3932 4187745 - 4188326 + | PfpI family intracellular peptidase Ajs_3933 4188426 - 4188803 + | hypothetical protein TERM 3357 4188853 - 4188832 - f 77 -3.7 -4.82678 | gap 1, overlap 4188833 GCACAAAAAGTAAAA TCGC-GGG CTTCACC CCCGGCGA GCGCACCGCGCGCAC Ajs_3934 4188875 - 4189372 + | phosphoribosylaminoimidazole carboxylase, catalytic subunit Ajs_3935 4189369 - 4190544 + | phosphoribosylaminoimidazole carboxylase ATPase subunit TERM 3358 4191516 - 4191487 - g 70 -9.9 -3.65351 | TGATCTGGATCGAAA CGCCGCCCGATGC GCCC GCATGGGAAGGCG TGCGCGACCGCCTGC Ajs_3936 4190556 - 4191554 + | translation factor SUA5 Ajs_3937 4191627 - 4192580 + | lipase TERM 3359 4192618 - 4192585 - T 88 -16.7 -3.33815 | gap 1, overlap 4192588 ACCGCTGGTAAGCAA GTACGCCGCCCGCGGG GCA CCCGCCGGCGGC-CAC ACCGGTGCTGCGCCG TERM 3360 4192616 - 4192588 - T 87 -17.3 -2.84098 | overlap 4192585 GCTGGTAAGCAAGTA CGCCGCCCGCGGG GCA CCCGCCGGCGGCC ACACCGGTGCTGCGC TERM 3361 4192642 - 4192661 + T 84 -16.4 -3.07113 | TGCGCCGGCCAGCCA CGGGGGCG CATC CGCCCCCG TTCGCTCCCCTGATC TERM 3362 4192723 - 4192696 - T 100 -11.2 -5.41143 | opp_overlap 4192698, overlap 4192698 GAGCCCCCAAAAAAA GAGGCCAGCCCC GCAA GGAGCCGGCCTT TCAAGCCTCGGAGAC TERM 3363 4192721 - 4192698 - T 100 -13.8 -4.34482 | opp_overlap 4192698, overlap 4192696 GCCCCCAAAAAAAGA GGCCAGCCCC GCAA GGAGCCGGCC TTTCAAGCCTCGGAG Ajs_3938 4193266 - 4192724 - | hypothetical protein TERM 3364 4193399 - 4193370 - R 75 -13.5 -3.0792 | opp_overlap 4193380, overlap 4193327 4193358 4193360 CAACATCGGAGGCAA CCCGTCGCGCCGC GCGG GCGGCACGACACG TCTGCCGGTGGGCTG Ajs_3939 4194933 - 4193452 - | D-alanyl-D-alanine carboxypeptidase PBP3 TERM 3365 4195071 - 4195040 - g 70 -13.1 -3.01924 | gap 2, overlap 4195063 CATCGCCGTGCAACA CGGCGCGCGCGTGTG GCAG CACA-GCG-GCGCCG GCGGCGCCCAGGCCT TERM 3366 4195328 - 4195298 - g 74 -14.6 -3.01712 | CGCCGTGGCCGAAGA GGCCCGCGCGCAGC ACG GCTGCACGCGGGTG GTGGCGACGCTGGAC Ajs_3940 4194984 - 4195694 + | peptidase M22, glycoprotease Ajs_3941 4195691 - 4196167 + | SSU ribosomal protein S18P alanine acetyltransferase Ajs_3942 4196164 - 4196940 + | phage SPO1 DNA polymerase-related protein Ajs_3943 4197120 - 4197614 + | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein TERM 3367 4198623 - 4198608 - g 74 -10.4 -3.7941 | CACCGTGCAGAACAA GCCCCA GTAC TGGGGC GCCAGCGGCGGCCTG Ajs_3944 4197655 - 4199502 + | aldehyde ferredoxin oxidoreductase TERM 3368 4199699 - 4199678 - g 72 -11.5 -3.53444 | overlap 4199691 TCATCGCCGCGGAAA CCCTGCGCA AGCA TGCGCCGGG CGACCGCATCACCCT Ajs_3945 4199626 - 4200918 + | FAD-dependent pyridine nucleotide-disulphide oxidoreductase Ajs_3946 4201008 - 4201262 + | thiamineS protein Ajs_3947 4201325 - 4201591 + | hypothetical protein TERM 3369 4201567 - 4201604 + F 70 -7.6 -4.07568 | gap 1 GCGGCACCTGGACCT GCACACGCACCGCGGCG GGGGG TGATGCGGTGCG-GCGC TTTTCCCCCGAAAAG TERM 3370 4201963 - 4201945 - g 73 -3.8 -4.63932 | CACGCTGGAAGAAAA GCGCTG GATCAAG CAGCAC TACGGCCTGTCCATC Ajs_3948 4201823 - 4202809 + | magnesium and cobalt transport protein CorA TERM 3371 4202833 - 4202885 + T 77 -13.4 -3.32844 | gap 2 CCCCTGAGCGGCTGC GCCGCTTCCCCCTTCTCTCGCACCGC TGC GCGCTGCG-G-GAAGGGGGACGAAGC TTGTGGCCTGGCGAA Ajs_3949 4203777 - 4203022 - | 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase TERM 3372 4203819 - 4203803 - R 100 -13.7 -5.08824 | GCCGGACGTAAAAAA GCCGGGA TTA TCCCGGC TGGGGGAATGCGAGA TERM 3373 4203825 - 4203865 + r 85 -10.3 -4.30719 | overlap 4203829 4203829 TTATCCCGGCTGGGG GAATGCGAGAGCCCGCGCG GGG CGCTCGGGTTCTCGGCTTA TTTCTTGTCGCGCAG TERM 3374 4203829 - 4203861 + r 83 -15.5 -3.15784 | overlap 4203825 4203829 CCCGGCTGGGGGAAT GCGAGAGCCCGCGCG GGG CGCTCGGGTTCTCGG CTTATTTCTTGTCGC TERM 3375 4203829 - 4203862 + r 100 -15.3 -4.27512 | gap 1, overlap 4203829 4203825 CCCGGCTGGGGGAAT GC-GAGAGCCCGCGCG GGG CGCTCGGGTTCTCGGC TTATTTCTTGTCGCG Ajs_3950 4205542 - 4203863 - | AMP-dependent synthetase and ligase Ajs_3951 4207096 - 4205672 - | NAD(P) transhydrogenase, beta subunit Ajs_3952 4207437 - 4207108 - | NAD(P) transhydrogenase, subunit alpha part 2 TERM 3376 4207138 - 4207152 + g 84 -9.2 -4.55697 | TTTCGCTTGTTCGGC GGGCGC CTT GCGCTC TTTCTTTCTGAACAT Ajs_3953 4208196 - 4207486 - | hypothetical protein Ajs_3954 4209345 - 4208230 - | NAD(P)(+) transhydrogenase (AB-specific) TERM 3377 4209231 - 4209199 - G 70 -11.1 -3.54424 | TCCCACGGCGGCAAA GCCGGCATCGGTGAC GCT GGCGCAGACGCCGGC GCCTGACTGCACCCG TERM 3378 4209250 - 4209270 + g 76 -8.9 -4.19371 | TGACTGCACCCGCAC CGTGTGGCC TTG GGCCACGAG TTTCTTGACGGTTTC TERM 3379 4209509 - 4209485 - R 100 -18.5 -5.28942 | GAGGCCAAAGAAAAA GCCCGGCGGCC ATG GGGCGCCGGGC TTGGGAAAGCGTGGG Ajs_3955 4210621 - 4209557 - | fructose-bisphosphate aldolase Ajs_3956 4212211 - 4210775 - | pyruvate kinase TERM 3380 4212239 - 4212249 + r 74 -5.4 -4.57073 | opp_overlap 4212239 TTTCCGTGGATGTAA TCGA GTT TCGA TTTTTGCACAAAATC Ajs_3957 4214460 - 4212295 - | aminopeptidase P TERM 3381 4212772 - 4212787 + g 91 -11.8 -4.2349 | GTTGCCTGCACGCGT GGCGGC GATG GCCGCC TTTTGGCTCTCCAGC TERM 3382 4213785 - 4213813 + g 79 -8.8 -4.40572 | gap 1 CACCCTCATCCCCCT GCTGGGCC-TGGT GCTG ACCGTGGCCCTGC TTTTCTACGCGTTCT TERM 3383 4214375 - 4214391 + g 71 -9.3 -3.85698 | overlap 4214376 GCAAGCCCGCACCCG ACGGGCC GCA GGCCCGC TTTCTGCCCAGCCAG Ajs_3958 4215431 - 4214616 - | nucleotidyl transferase TERM 3384 4215536 - 4215552 + H 72 -7.9 -4.15044 | CCAGGCTGCGGGGCC CCCGGTA AAA TCCCGGG TTTCTTCACAAGAAC TERM 3385 4215640 - 4215614 - g 76 -8.7 -4.183 | CCAACTCTCAACAAA TGGCGAATGCG ATCCG CGCACTCGCAA TGGATGCCGTTCAAC Ajs_3959 4215595 - 4217631 + | transketolase TERM 3386 4218252 - 4218239 - g 70 -5.9 -4.18494 | CACCGCCACGCAAAA GACCG TGGA CGGCC CGAGCAACAAGGACT Ajs_3960 4217685 - 4218686 + | glyceraldehyde-3-phosphate dehydrogenase TERM 3387 4218714 - 4218729 + F 100 -11.8 -5.37043 | opp_overlap 4218714 GCCGCTCACAGAGAA CGCGCC TTCG GGCGCG TTTTTTATGTCAAAT TERM 3388 4218729 - 4218714 - f 75 -11.8 -3.58726 | opp_overlap 4218714 GCCGCTCACAGAGAA CGCGCC TTCG GGCGCG TTTTTTATGTCAAAT Ajs_3961 4218831 - 4219391 + | hypothetical protein TERM 3389 4219400 - 4219427 + T 100 -14.8 -4.14392 | opp_overlap 4219400 CTTCTGAAGGCAAAA GGCCGCAGGAGT CAAC GCCCCTGCGGCC TTTTGCGCGTTGCAG TERM 3390 4219427 - 4219400 - T 100 -16.3 -4.27316 | opp_overlap 4219400 CTTCTGAAGGCAAAA GGCCGCAGGAG TCAACG CCCCTGCGGCC TTTTGCGCGTTGCAG Ajs_3962 4219833 - 4219489 - | ribosomal subunit interface protein, putative TERM 3391 4219957 - 4219939 - H 84 -8.8 -4.45544 | opp_overlap 4219943 4219945 4219946, overlap 4219933 4219943 TCGTATCAAGCAAAA CGCACAGC CGC GCTCTGCG GCTCGTTCCTACAGC Ajs_3963 4220005 - 4220922 + | peptidase C26 Ajs_3964 4221453 - 4220980 - | peptidylprolyl isomerase, FKBP-type Ajs_3965 4222608 - 4221565 - | pirin domain-containing protein TERM 3392 4222770 - 4222752 - R 72 -2.3 -4.7254 | gap 1, opp_overlap 4222763 ATCTTCGAGCAAAAA CCGTC-GC AAAG GCAGTCGG GCTGAGCGCTGGCAG Ajs_3966 4223300 - 4222872 - | 3-demethylubiquinone-9 3-methyltransferase TERM 3393 4222997 - 4222953 - G 76 -8.4 -4.17048 | gap 1, overlap 4222954 CGCGGGCGAAAAGAA GGTCTTGGCCATCGGCGCCAC CACC GTGCCGCCGTCGGCCA-GCGC GTCGAACCTGCTGCG Ajs_3967 4223762 - 4223343 - | hypothetical protein Ajs_3968 4224946 - 4223942 - | short-chain dehydrogenase/reductase SDR Ajs_3969 4225678 - 4225118 - | hypothetical protein Ajs_3970 4226504 - 4225743 - | DTW domain-containing protein TERM 3394 4226573 - 4226588 + H 78 -11.8 -3.73775 | TTGTGGGGCATGCGC GCGGCG CGGC CGCCGC TTTCATCAGGGTAAG Ajs_3971 4226688 - 4227593 + | IclR family transcriptional regulator Ajs_3972 4227590 - 4228741 + | thiolase Ajs_3973 4228747 - 4229124 + | hypothetical protein TERM 3395 4229341 - 4229380 + G 75 -12 -3.64703 | gap 1 CCGCCGCCGCTTCAC GGGCCTGGCCTGCGCCGCG CTG TGCGCCGCCG-CCACGCCC TTTGCCTGGGCCAGC TERM 3396 4229558 - 4229521 - g 80 -14.7 -3.35679 | overlap 4229544 CTTCGTGATCGACAA CCGCCCCGGCGCGGGTG CCAA CATCGGCGCCGAGGCCG TGGCCCGCAGCCCCG TERM 3397 4230004 - 4229978 - g 79 -13 -3.66178 | GCCGGCAAGTTGAAA GCGCTGGCCG TCACCAG CAGCCAGCGC TCGCCCAGCGCGCCG Ajs_3974 4229306 - 4230292 + | hypothetical protein Ajs_3975 4230496 - 4232583 + | CoA-binding domain-containing protein TERM 3398 4232653 - 4232678 + T 84 -15.5 -3.28712 | gap 1, opp_overlap 4232632 GCTGGCCGGGGCGCG GCGCACGC-CCA CCC TGGTGCGTGCGC TTGTGCCGCGCCGGG Ajs_3976 4233501 - 4232803 - | glutathione S-transferase domain-containing protein fabG 4234277 - 4233516 - | 3-ketoacyl-(acyl-carrier-protein) reductase Ajs_3978 4234688 - 4234296 - | glyoxalase/bleomycin resistance protein/dioxygenase TERM 3399 4235338 - 4235352 + r 75 -2.8 -4.88795 | CAAGCGCTCTTGGTA GATTTG TTC CGGATC TTTCTTTTCTTGAAT Ajs_3979 4236160 - 4235570 - | hypothetical protein TERM 3400 4236235 - 4236192 - R 74 -11.9 -3.42056 | gap 3, opp_overlap 4236185 4236198 ATGCCTAACGTAGAA GT-CAC-CGG-CGCTGCGCG GCTTTAT CGCGCAGCGTCCGTGTGGAC TGCCGGGTTAGCTTT Ajs_3980 4237565 - 4236243 - | hypothetical protein Ajs_3981 4238033 - 4237635 - | hypothetical protein TERM 3401 4237941 - 4237961 + g 81 -4 -5.05782 | overlap 4237942 GTTCGGAAGGTTTTT CTTTGCAC AGGTG GTGCAAAA TTTTTTCCCGTCAAT TERM 3402 4238079 - 4238056 - R 86 -16 -3.18199 | gap 1, overlap 4238044 TAACGGCCAAGGTAA GCCG-CCCGCC GTA GGCGGGTCGGC TTGAACGCCGGGTTA Ajs_3982 4238285 - 4238040 - | hypothetical protein TERM 3403 4238179 - 4238152 - G 100 -14.8 -4.7373 | overlap 4238134 4238168 GCAGCCCACGAAAAA GCGCTGGGCCAC GAGA GCGGCGCAGCGC TGCAAAAATGATAGC TERM 3404 4238243 - 4238232 - G 70 -2.2 -4.62069 | GCTGGAGCCCAAAAA GGCT TGAA AACC TTTTGAACAGGGCAT TERM 3405 4238346 - 4238313 - R 81 -13.1 -3.70722 | gap 1, opp_overlap 4238318, overlap 4238318 GGGACTAACAGACAA GGTAAGCCG-CCCGCC TTT GGCGGGTCGGCTTGAC TGCTGGGTTAGATCC TERM 3406 4238341 - 4238318 - R 88 -16 -3.28979 | gap 1, opp_overlap 4238318, overlap 4238313 TAACAGACAAGGTAA GCCG-CCCGCC TTT GGCGGGTCGGC TTGACTGCTGGGTTA TERM 3407 4238318 - 4238341 + r 84 -16 -3.10641 | gap 1, opp_overlap 4238318 4238313 TAACAGACAAGGTAA GCCG-CCCGCC TTT GGCGGGTCGGC TTGACTGCTGGGTTA Ajs_3983 4238923 - 4238411 - | putative signal peptide protein Ajs_3984 4239329 - 4239000 - | hypothetical protein TERM 3408 4239963 - 4239974 + r 82 -3 -5.13344 | opp_overlap 4239963 GATTAAATGTATAAA TGAA ATTT TTCA TTTTTCTATTGGTGT TERM 3409 4240041 - 4240093 + r 75 -12.2 -3.65581 | gap 2, opp_overlap 4240044, overlap 4240043 4240044 TGTAAGGCTAACGTG AAAGCTC-AGCCGA-CGGCAAAAAGC GCA GCTTTTTGGCGGTCGGCTGGAGCGTG TTGTTAGCCATTACT TERM 3410 4240043 - 4240091 + r 83 -14.8 -3.40498 | gap 2, opp_overlap 4240044, overlap 4240041 4240044 TAAGGCTAACGTGAA AGCTC-AGCCGA-CGGCAAAAAGC GCA GCTTTTTGGCGGTCGGCTGGAGCG TGTTGTTAGCCATTA TERM 3411 4240090 - 4240044 - R 100 -18.3 -3.66921 | gap 2, opp_overlap 4240043 4240041 4240044 AAGGCTAACGTGAAA GCTC-AGCCGA-CGGCAAAAAGC GCA GCTTTTTGGCGGTCGGCTGGAGC GTGTTGTTAGCCATT TERM 3412 4240044 - 4240090 + r 86 -18.3 -2.63817 | gap 2, opp_overlap 4240044, overlap 4240043 4240041 AAGGCTAACGTGAAA GCTC-AGCCGA-CGGCAAAAAGC GCA GCTTTTTGGCGGTCGGCTGGAGC GTGTTGTTAGCCATT Ajs_3985 4240643 - 4240104 - | hypothetical protein TERM 3413 4240772 - 4240758 - R 74 -9.2 -3.84719 | ACTGCGAAATGGAAA CGCCCG AGG CGGACG GATGGCGAACGTAAA TERM 3414 4241033 - 4241048 + r 74 -6.2 -4.4078 | TTTAGTTCAATGATT TCAAGT GCCG ACTTGA TTTTCATTGCCGCAG TERM 3415 4241310 - 4241278 - R 90 -13.6 -4.00348 | gap 2, opp_overlap 4241282, overlap 4241282 GGCTAACGAACGAAA GT-AAGCCG-CCTGCC GAA GGCAGGTCGGCTTGAC TGCCCGGTTAGACCC TERM 3416 4241305 - 4241282 - R 85 -14.6 -3.63141 | gap 1, opp_overlap 4241282, overlap 4241278 AACGAACGAAAGTAA GCCG-CCTGCC GAA GGCAGGTCGGC TTGACTGCCCGGTTA TERM 3417 4241282 - 4241305 + r 78 -14.6 -3.06133 | gap 1, opp_overlap 4241282 4241278 AACGAACGAAAGTAA GCCG-CCTGCC GAA GGCAGGTCGGC TTGACTGCCCGGTTA TERM 3418 4241405 - 4241378 - R 100 -14.2 -4.84363 | opp_overlap 4241381 GCAAACCACGAAAAA GCAGTGTGCCAC GGAG GCGACACACTGC TTGAAAAATGATAGC Ajs_3988 4241929 - 4241756 - | hypothetical protein TERM 3419 4242097 - 4242061 - R 77 -4.4 -4.87626 | overlap 4242063 GTTTAAGAGGAAAAA CAGCCTCTAGCGCTTA TGCAG CAAGCGCCAATAGCTA TTTATTTAGGAGCAA Ajs_3989 4242547 - 4242197 - | hypothetical protein Ajs_3990 4245497 - 4242552 - | DNA topoisomerase III TERM 3420 4242867 - 4242907 + g 79 -7.6 -4.56597 | gap 2, overlap 4242869 4242871 4242899 AGGCTTAGAGGCTTT TACG-GCT-CCAGCGCCCGT CCC ACGTGCGCTGGCAGCTCCTG TTTTTGCAGCAGCCG TERM 3421 4242871 - 4242902 + g 74 -15.2 -3.01831 | gap 1, overlap 4242869 4242867 4242899 TTAGAGGCTTTTACG GCT-CCAGCGCCCGT CCC ACGTGCGCTGGCAGC TCCTGTTTTTGCAGC Ajs_3991 4245608 - 4246249 + | nuclear protein SET TERM 3422 4246865 - 4246907 + G 83 -12.7 -4.08216 | gap 1, opp_overlap 4246847, overlap 4246869 4246901 TCACCGCGGCCAGCG CGCTGCAGCGCATCGCGCCG CCGC TGGTGC-ATGCGCTGCTGGG TTTTGCCGAGCATGG TERM 3423 4246869 - 4246903 + G 72 -15.1 -2.74605 | gap 1, opp_overlap 4246847, overlap 4246865 4246901 CGCGGCCAGCGCGCT GCAGCGCATCGCGCCG CCGC TGGTGC-ATGCGCTGC TGGGTTTTGCCGAGC Ajs_3992 4246246 - 4247103 + | biotin--acetyl-CoA-carboxylase ligase TERM 3424 4247638 - 4247692 + G 72 -8.2 -4.07568 | opp_overlap 4247640, overlap 4247651 GCTGCGCGCGCTCAA GATCCCCTACGACCGGCCCGGCGC GGCACTG GAGCCGGGGCTGTCGCTGGGGCGC TTTTCCACCGAGGAG Ajs_3993 4247162 - 4247893 + | sporulation domain-containing protein Ajs_3994 4248983 - 4248015 - | hypothetical protein TERM 3425 4249238 - 4249217 - R 90 -13.7 -4.05446 | opp_overlap 4249217 GCGTGGAATGACAAA GGCCCGTCC ATGG GAACGGGCC TTGCGTTGGGAACCT TERM 3426 4249217 - 4249238 + r 70 -12.3 -3.17194 | gap 1, opp_overlap 4249217 GCGTGGAATGACAAA GGCCCG-TCC ATG GGAACGGGCC TTGCGTTGGGAACCT Ajs_3995 4250223 - 4249285 - | N-formylglutamate amidohydrolase Ajs_3996 4251207 - 4250242 - | hypothetical protein TERM 3427 4250961 - 4251013 + g 74 -10.4 -3.8211 | overlap 4250962 CGCCGAAGGTCAGCC CGTCGGTGGCGCGCGCCACC-TCGGC CAT GCCGATGGAGCCGCCCGC-GCCGGCC TTGTTCTCGATCACC TERM 3428 4250962 - 4251012 + g 71 -13.9 -2.88945 | overlap 4250961 GCCGAAGGTCAGCCC GTCGGTGGCGCGCGCCACC-TCGGC CAT GCCGATGGAGCCGCCCGC-GCCGGC CTTGTTCTCGATCAC TERM 3429 4251283 - 4251299 + H 83 -9.5 -4.25104 | AGCTGTGCCTGTTAT CATTCCA TTG TGGAATG TTTTGATCGGCAAAC Ajs_3997 4251318 - 4252244 + | LysR family transcriptional regulator Ajs_3998 4253806 - 4252325 - | integral membrane sensor signal transduction histidine kinase Ajs_3999 4254524 - 4253850 - | two component transcriptional regulator Ajs_4000 4255140 - 4254574 - | MarR family transcriptional regulator Ajs_4001 4255218 - 4256339 + | recA protein TERM 3430 4256340 - 4256352 + F 74 -4.7 -4.57073 | overlap 4256329 GAGATCGAGGCGTAA CCACG CAC CGGGG TTTTTGAACGAAATC TERM 3431 4256404 - 4256366 - f 81 -12.4 -3.90112 | opp_overlap 4256367 4256369, overlap 4256367 GGTTTTTGAACGAAA TCTGCCTCCAGCGCTTGA CCA TCAAGCGCTGGAAGCTCT TTTTTCAATAGCATT TERM 3432 4256367 - 4256403 + F 100 -13.7 -5.09225 | opp_overlap 4256366 4256367, overlap 4256369 GTTTTTGAACGAAAT CTGCCTCCAGCGCTTGA CCA TCAAGCGCTGGAAGCTC TTTTTTCAATAGCAT TERM 3433 4256403 - 4256367 - f 79 -15.9 -2.93853 | opp_overlap 4256367 4256369, overlap 4256366 GTTTTTGAACGAAAT CTGCCTCCAGCGCTTGA CCA TCAAGCGCTGGAAGCTC TTTTTTCAATAGCAT TERM 3434 4256369 - 4256401 + F 100 -20.7 -4.17608 | opp_overlap 4256367 4256366, overlap 4256367 TTTTGAACGAAATCT GCCTCCAGCGCTTGA CCA TCAAGCGCTGGAAGC TCTTTTTTCAATAGC Ajs_4002 4256421 - 4256876 + | regulatory protein RecX Ajs_4003 4259464 - 4257110 - | hypothetical protein secF 4260501 - 4259548 - | preprotein translocase subunit SecF secD 4262414 - 4260516 - | preprotein translocase subunit SecD Ajs_4006 4262838 - 4262509 - | protein translocase subunit yajC TERM 3435 4263075 - 4263060 - H 70 -7.5 -4.05389 | opp_overlap 4263059 TATATATAGCATAAA GCCCC GGACCA GGGGC GGTTAATGCATCGGA Ajs_4007 4263233 - 4264363 + | MscS mechanosensitive ion channel TERM 3436 4264458 - 4264434 - T 72 -12.1 -3.34013 | overlap 4264436 4264449 TAGGCGGGGAAGGAA TAGGCGGGCAT GAC AGGCCCGCCCA CCGTCTCAGGCCACT TERM 3437 4264456 - 4264436 - T 73 -12.5 -3.23853 | overlap 4264434 4264449 GGCGGGGAAGGAATA GGCGGGCAT GAC AGGCCCGCC CACCGTCTCAGGCCA Ajs_4008 4268084 - 4264464 - | indolepyruvate ferredoxin oxidoreductase Ajs_4009 4268261 - 4268767 + | AsnC family transcriptional regulator TERM 3438 4268872 - 4268893 + F 77 -13.7 -3.33696 | gap 1, opp_overlap 4268863 CAGCAACCCGCTGAA GCCGCCCGCG CAT CG-GGGCGGC TTCGTTCCAGCGAGG Ajs_4010 4269069 - 4269926 + | hypothetical protein TERM 3439 4270579 - 4270591 + G 71 -3.3 -4.59109 | overlap 4270580 GATGCAGATCCAGTA TGCAG AGG CTGCC TTTTTGAACGGTCTG Ajs_4011 4269923 - 4271095 + | hypothetical protein Ajs_4012 4271170 - 4272879 + | protein of unknown function DUF894, DitE Ajs_4013 4274196 - 4272988 - | MltA domain-containing protein Ajs_4014 4274466 - 4275116 + | OmpA/MotB domain-containing protein TERM 3440 4275202 - 4275175 - T 74 -12.6 -3.25341 | opp_overlap 4275176, overlap 4275173 4275176 4275178 ATGTGAAGACGAAGA CGACGCGCGCCC GCAA GGGCCCGCGTCT TTTTTTACGCCGGTG TERM 3441 4275201 - 4275176 - T 80 -16.1 -2.54723 | opp_overlap 4275176, overlap 4275175 4275173 4275178 TGTGAAGACGAAGAC GACGCGCGCCC GCAA GGGCCCGCGTC TTTTTTTACGCCGGT TERM 3442 4275176 - 4275201 + T 100 -16.1 -5.40474 | opp_overlap 4275176 4275175 4275173 4275178 TGTGAAGACGAAGAC GACGCGCGCCC GCAA GGGCCCGCGTC TTTTTTTACGCCGGT Ajs_4015 4275857 - 4275207 - | response regulator receiver protein TERM 3443 4275309 - 4275278 - G 74 -15.1 -3.02144 | opp_overlap 4275277 GCATCTTGTCGAACA CGCGCGCGCGGTG CACCTC CACCGTGCGCACG CTGATGTCAAGCTGA Ajs_4016 4278007 - 4275857 - | PAS/PAC sensor signal transduction histidine kinase TERM 3444 4277662 - 4277678 + g 71 -12.3 -3.34233 | overlap 4277671 GGTCGGGGTCGCCCG CCTGCAG CGC CTGCAGG TTCTGCAGGTTGTGC TERM 3445 4277671 - 4277687 + g 71 -12.3 -3.28712 | overlap 4277662 CGCCCGCCTGCAGCG CCTGCAG GTT CTGCAGG TTGTGCGCGAAGGCG Ajs_4017 4278822 - 4278007 - | Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase Ajs_4018 4283075 - 4278819 - | hypothetical protein TERM 3446 4278857 - 4278880 + g 72 -13.8 -3.02511 | GTGGAACGGTAGGGC TCGCTGCGCC TTCC GGCGCAGCGC TCTTGCGGCGCTGGA TERM 3447 4284587 - 4284644 + G 75 -13.4 -3.39018 | gap 3, overlap 4284614 GTGCGCGAGCGCGTG GCCGAGTGGCGCACC-CATCCGCGCGTGC AGG GCCTGCGCG-ATGAGGCGCGC-GCGCGGC TGTTTCGCATCGTGC Ajs_4019 4283198 - 4285936 + | (glutamate--ammonia-ligase) adenylyltransferase TERM 3448 4286070 - 4286055 - f 76 -6.2 -4.56775 | opp_overlap 4286055 AGCGCCCCGTAAAAA TCAAAC AAAC GTTTGA TTCATCGCGGTCTAA Ajs_4020 4286085 - 4286861 + | TetR family transcriptional regulator Ajs_4021 4286858 - 4288309 + | RND efflux system outer membrane lipoprotein TERM 3449 4289354 - 4289390 + G 72 -12.9 -3.14132 | gap 1 CATCACCTCGGGCCT GGCGCCCCAGGCGCGC ATCGTG GCGCGCG-GCGGCGCC TTCCTGAACGACGGC Ajs_4022 4288326 - 4289498 + | RND family efflux transporter MFP subunit TERM 3450 4290163 - 4290148 - g 72 -11.8 -3.57263 | AGGTGCAGGTGGAAA GCGCGG GCGG CCGCGC CGAGCTGGGCGGGGC Ajs_4023 4289508 - 4292603 + | acriflavin resistance protein TERM 3451 4292618 - 4292657 + F 86 -8 -4.73388 | gap 1, opp_overlap 4292656, overlap 4292622 GGGTCTAGCGTGTTT TAGGGCT-CCAGCGCTT TGACAGC AAGCGCTGGAAGCTATA TTTTTAATAGCAATT TERM 3452 4292622 - 4292653 + F 73 -11 -3.57901 | gap 1, overlap 4292618 CTAGCGTGTTTTAGG GCT-CCAGCGCTT TGACAGC AAGCGCTGGAAGC TATATTTTTAATAGC Ajs_4024 4292764 - 4293405 + | glutathione peroxidase TERM 3453 4293644 - 4293670 + T 100 -14.5 -5.30616 | gap 1, opp_overlap 4293644 ATTCCGCAGCAAAAA GCGCGCACTTCC TCAC GGAAG-GCGCGC TTTTTCTTTAGGTCC TERM 3454 4293670 - 4293644 - T 100 -14.5 -4.7254 | gap 1, opp_overlap 4293644 ATTCCGCAGCAAAAA GCGCGCACTTCC TCAC GGAAG-GCGCGC TTTTTCTTTAGGTCC Ajs_4025 4294314 - 4293700 - | glutathione S-transferase domain-containing protein TERM 3455 4294233 - 4294246 + g 74 -2.3 -4.82901 | opp_overlap 4294234, overlap 4294234 CGTTCTCCTCGACGA ACTGG TAAT CCAGC TTTTTCTCGGCCAGC TERM 3456 4295738 - 4295716 - g 72 -13.4 -3.14564 | GCACGCGCTGATCAA CGGCCTGGAG ATC CCCCAAGCCG ACAAGGACCGCCTGC Ajs_4026 4294433 - 4295812 + | adenylosuccinate lyase TERM 3457 4295832 - 4295873 + F 76 -9.4 -4.08767 | gap 1, overlap 4295836 GCCGGTTTGAGCCTT TTTG-CCTGCCCGCGCTTG CCAGC CAAGCGCGGGCAGCTCTCA TTTTGAAAGCATCCC TERM 3458 4295836 - 4295868 + F 91 -19.2 -3.09823 | overlap 4295832 GTTTGAGCCTTTTTG CCTGCCCGCGCTTG CCAGC CAAGCGCGGGCAGC TCTCATTTTGAAAGC TERM 3459 4296212 - 4296225 + G 79 -6.7 -4.67697 | opp_overlap 4296210 4296211 GGCCTGCAGCAAATC CGATG CGGT CATCG TTTATTGTTTTCACC Ajs_4027 4295889 - 4296449 + | YaeQ family protein Ajs_4028 4296828 - 4296523 - | hypothetical protein Ajs_4029 4297312 - 4296869 - | hypothetical protein TERM 3460 4297364 - 4297396 + H 72 -7.6 -4.1899 | overlap 4297360 4297361 GGTGTGTTCCATGCG CATGGCGGCGGGCC GCCAG GGCCATTCGCTATG TTTTAAATAGCATGA Ajs_4030 4297834 - 4298565 + | integral membrane protein TerC Ajs_4031 4298614 - 4299087 + | hypothetical protein TERM 3461 4299127 - 4299161 + F 100 -20.1 -5.40072 | gap 1, opp_overlap 4299115 CCACGGTTCAGCCCA GCCGGCCCATC-GCGT GCAA GCGCAGATGGGCCGGC TTTTTTTACACGCGC Ajs_4032 4299152 - 4299586 + | membrane protein of unknown function Ajs_4033 4301119 - 4299554 - | peptidase M48, Ste24p TERM 3462 4299745 - 4299761 + g 72 -13.7 -3.06492 | overlap 4299720 CGGCGCGCACGGCGC GCAGGGG CTG CCCCTGC TGTTGCCATACCTGC TERM 3463 4301328 - 4301306 - g 70 -11.2 -3.53224 | overlap 4301307 GACGTCGGCGCCAAA CCGGCCACGC ACC GCGTGGCCAT TGCCACGGGCCGCAT TERM 3464 4301327 - 4301307 - g 72 -14.7 -2.71791 | overlap 4301306 ACGTCGGCGCCAAAC CGGCCACGC ACC GCGTGGCCA TTGCCACGGGCCGCA Ajs_4034 4301231 - 4301716 + | GTP cyclohydrolase subunit MoaC Ajs_4035 4302189 - 4301878 - | DNA polymerase beta subunit TERM 3465 4302110 - 4302134 + g 85 -15.7 -3.65902 | overlap 4302111 ACCCGTGCCCCAGGC ACCGCCGCATC TAC GATGCGGCGGA TTTCGCTGCGCTGGG TERM 3466 4302111 - 4302133 + g 93 -19.2 -2.79327 | overlap 4302110 CCCGTGCCCCAGGCA CCGCCGCATC TAC GATGCGGCGG ATTTCGCTGCGCTGG Ajs_4036 4302635 - 4302186 - | HI0074 family nucleotidyltransferase substrate binding protein TERM 3467 4302864 - 4302808 - R 76 -5.9 -4.63218 | gap 3, opp_overlap 4302851, overlap 4302809 4302810 GTCTCTCGAAGAAAA CTGC-CCGCCGCGTCAGGCACACACTCG CCCT CTAATGCGCGCATGA-GCGGCGATGC-G CTGATCGTTCAATTC Ajs_4037 4303180 - 4302839 - | hypothetical protein TERM 3468 4302938 - 4302910 - G 100 -10.9 -5.00616 | overlap 4302911 TCCCCCGGCAAAAAA CGGCCTGCACCAG TGG CTGGAACAGGCCC TGCACATACTCATTC TERM 3469 4302937 - 4302911 - G 78 -14.4 -3.60048 | overlap 4302910 CCCCCGGCAAAAAAC GGCCTGCACCAG TGG CTGGAACAGGCC CTGCACATACTCATT Ajs_4038 4303292 - 4303792 + | molybdenum cofactor biosynthesis protein C Ajs_4039 4304761 - 4304003 - | FimB TERM 3470 4304944 - 4304929 - R 100 -10.4 -5.76237 | opp_overlap 4304928 4304929 4304931 CACAGAAACAAAAAA GAGCGC CGAA GCGCTC CTTTCCCGATGTGCA Ajs_4040 4305509 - 4304973 - | fimbrial protein pilin TERM 3471 4306016 - 4305994 - H 74 -12.7 -3.32402 | gap 1, opp_overlap 4306000, overlap 4305992 4305990 4305995 CCCACATTAAAGAGA GCC-GCCGGG CTTG CCCGGCAGGC CGTTGGTCGGCGGCA Ajs_4041 4306085 - 4307311 + | transposase IS116/IS110/IS902 family protein TERM 3472 4307640 - 4307618 - f 74 -12.7 -3.32402 | gap 1, opp_overlap 4307624, overlap 4307616 4307614 4307619 CCCACATTAAAGAGA GCC-GCCGGG CTTG CCCGGCAGGC CGTTGGTCGGCGGCA Ajs_4042 4307709 - 4308935 + | transposase IS116/IS110/IS902 family protein Ajs_4043 4309712 - 4309077 - | FHA domain-containing protein TERM 3473 4309264 - 4309274 + g 75 -6.8 -4.36914 | overlap 4309253 4309262 CCGGGCTTGCCAATG GTGG TAA CCAC TTTTGTCAGAGCCAC TERM 3474 4309827 - 4309855 + r 78 -3 -5.06451 | gap 2, opp_overlap 4309815, overlap 4309831 AAAGGTCACGAGGTG CGCAGCAGGCGCCC CAT GAG-GCC-GCCGCG TTTTTTGGCGTCCTG Ajs_4044 4310632 - 4309817 - | protein phosphatase 2C domain-containing protein Ajs_4045 4311598 - 4310915 - | integral membrane protein TerC TERM 3475 4311653 - 4311627 - R 100 -15.9 -4.30014 | opp_overlap 4311627 GTTATGAATCGAAAA CGCCAGCCTGG GTAAA CCAAGCTGGCG TTTCTTTTGTGTTGG TERM 3476 4311627 - 4311653 + r 100 -13.7 -4.88163 | opp_overlap 4311627 GTTATGAATCGAAAA CGCCAGCCTGG GTAAA CCAAGCTGGCG TTTCTTTTGTGTTGG Ajs_4046 4312647 - 4311754 - | succinyl-CoA synthetase subunit alpha TERM 3477 4311922 - 4311940 + g 75 -13.2 -3.37959 | opp_overlap 4311925, overlap 4311925 GGTCACCCCTGCGAT GAAGCCCA CGA TGGGCTTC TTCATATTGGCCTTG TERM 3478 4311925 - 4311937 + g 71 -9.1 -3.82084 | opp_overlap 4311925, overlap 4311922 CACCCCTGCGATGAA GCCCA CGA TGGGC TTCTTCATATTGGCC sucC 4313827 - 4312667 - | succinyl-CoA synthetase subunit beta Ajs_4048 4314004 - 4314936 + | N-acetyl-gamma-glutamyl-phosphate reductase Ajs_4049 4316307 - 4315147 - | Fis family transcriptional regulator Ajs_4050 4317640 - 4316360 - | peptidoglycan-binding LysM Ajs_4051 4317822 - 4318334 + | peptide deformylase Ajs_4052 4318331 - 4318846 + | putative lipoprotein transmembrane TERM 3479 4319674 - 4319690 + G 70 -2.1 -4.61868 | overlap 4319669 CTCGCGCACGCTGGA TGCGGCC TGC GGCCAGA TTTTGTCTATAGATG Ajs_4053 4318880 - 4319851 + | methionyl-tRNA formyltransferase Ajs_4054 4319848 - 4320597 + | AzlC family protein Ajs_4055 4320594 - 4320929 + | branched-chain amino acid transport Ajs_4056 4321019 - 4322212 + | phosphoglycerate kinase TERM 3480 4322279 - 4322237 - T 100 -16.4 -4.88388 | opp_overlap 4322240, overlap 4322238 4322240 AGAACGCTATAAAAA TCAGAGCTGCTTGCGCTTAT TGC ATAAGCGCTAGCAGCTCTTT TTACTTGAACTCCTG TERM 3481 4322278 - 4322238 - T 100 -19.9 -3.51948 | opp_overlap 4322240, overlap 4322237 4322240 GAACGCTATAAAAAT CAGAGCTGCTTGCGCTTAT TGC ATAAGCGCTAGCAGCTCTT TTTACTTGAACTCCT TERM 3482 4322276 - 4322240 - T 100 -22.5 -3.32317 | opp_overlap 4322240, overlap 4322238 4322237 ACGCTATAAAAATCA GAGCTGCTTGCGCTTAT TGC ATAAGCGCTAGCAGCTC TTTTTACTTGAACTC TERM 3483 4322240 - 4322276 + T 100 -22.5 -4.87291 | opp_overlap 4322240 4322238 4322237 ACGCTATAAAAATCA GAGCTGCTTGCGCTTAT TGC ATAAGCGCTAGCAGCTC TTTTTACTTGAACTC Ajs_4057 4323179 - 4322280 - | hypothetical protein TERM 3484 4323340 - 4323370 + G 70 -11 -3.55761 | CAACGACTCCCTGCT GTGCGTGGGCCTGG ACC CCGAACCCACGCGC TTTCCCGAGTCCGTG pyrF 4323191 - 4324111 + | orotidine 5'-phosphate decarboxylase Ajs_4059 4324142 - 4324414 + | LysR family transcriptional regulator Ajs_4060 4324524 - 4325528 + | hypothetical protein Ajs_4061 4325525 - 4326499 + | hypothetical protein TERM 3485 4326957 - 4326975 + F 83 -14.6 -3.51976 | overlap 4326953 GCGTTGCCAAGCCTC GCTGGGGT AGC ACCCCAGC TTCGTTTGGCGCCTT TERM 3486 4326991 - 4327001 + F 72 -2.4 -4.72272 | overlap 4326979 4326978 TTCGTTTGGCGCCTT GCGC CTG GCCC TTTTTGATCGCAACG TERM 3487 4328460 - 4328411 - g 78 -15 -3.28924 | gap 2 GACCGTGCGCCAGAA CGCCGACAGCGCCGCGCGTGCCAG CGAG CTGGC-CAC-CAGCGCCAGCGGCG TGGCCGCACAGGGCG Ajs_4062 4327080 - 4329041 + | methyl-accepting chemotaxis sensory transducer TERM 3488 4329093 - 4329066 - T 84 -15.7 -3.32844 | GCGCTTATCCCACAA GGGTTTGAGGC CACTTT GCCTCAAACCC GCAATCACCTCAGGC Ajs_4063 4330596 - 4329103 - | sodium/proline symporter TERM 3489 4330694 - 4330662 - R 89 -16.1 -3.41795 | AAAGGTGGAGGAGAA GCCGGCGCGGAGGCC GGG GGCTGCCGTGCCGGC AAGCGCCGGCCAGCG TERM 3490 4330792 - 4330757 - R 74 -9.6 -3.87075 | gap 1, overlap 4330777 ATCATTCGCCATAAA GCCGCGCTGGCGTAGTG AAA CACTCCGCC-GCGGCGC GCAACTGTAACTGCC Ajs_4064 4333920 - 4330831 - | excinuclease ABC subunit A TERM 3491 4335349 - 4335392 + G 87 -6.7 -5.03314 | gap 1, overlap 4335353 4335354 CCCTGTGGTTGCTCA TCACCTGGCCGCTGCGGC CGGTGGGAC GCGGCGGCGGCCAC-TGA TTTTTTCACCCTCCG Ajs_4065 4334211 - 4335392 + | major facilitator superfamily transporter Ajs_4066 4335527 - 4336072 + | single-strand binding protein TERM 3492 4336119 - 4336089 - T 91 -17.7 -3.14132 | gap 1, opp_overlap 4336089 4336095, overlap 4336095 TCGGCCTCGCACCAA GCACAACGGGCGCC CCAG GGCGCCCGTT-TGC TATTGCAGTGATAGC TERM 3493 4336089 - 4336119 + T 90 -17.7 -3.07043 | gap 1, opp_overlap 4336089 4336095, overlap 4336095 TCGGCCTCGCACCAA GCACAACGGGCGCC CCAG GGCGCCCGTT-TGC TATTGCAGTGATAGC TERM 3494 4336095 - 4336114 + T 95 -16.4 -3.93038 | opp_overlap 4336089 4336095, overlap 4336089 TCGCACCAAGCACAA CGGGCGCC CCAG GGCGCCCG TTTGCTATTGCAGTG TERM 3495 4336114 - 4336095 - T 91 -16.4 -3.54029 | opp_overlap 4336095 4336089, overlap 4336089 TCGCACCAAGCACAA CGGGCGCC CCAG GGCGCCCG TTTGCTATTGCAGTG Ajs_4067 4337841 - 4336180 - | L-lactate transport TERM 3496 4337983 - 4337973 - R 93 -8.2 -5.03314 | CGCAGCGTGAAAAAA CCGG AGA CCGG TGCTGAAGCAATTTC trmU 4339219 - 4338080 - | tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase TERM 3497 4338410 - 4338460 + g 79 -3.7 -4.8622 | gap 1, opp_overlap 4338401, overlap 4338424 GAACCAGGGCGCATG GTCGCCCGCGC-CGCGCACCGGCT GGCC AGACGGTGCTTTCGCCCCGGCGCC TTTTTCCTTGACACC TERM 3498 4339196 - 4339210 + g 83 -2.8 -5.14563 | GCCCCCCGACAGGCC CACC ACGACCC GGTG TTTTTTCATCGCCGG TERM 3499 4339264 - 4339244 - H 100 -13.9 -4.4261 | GCCCCAAGATGAAAA GCGGCCCCC TTG GGGGGCAGC GACCACACGAAGTGG TERM 3500 4340112 - 4340144 + G 70 -10.3 -3.64703 | CTGCAGCCCTGGGCG GCGCTGGGCCGCTAC CCG GACGCGGCCACGCGC TTTCAGTGCGCGCGC Ajs_4069 4339368 - 4340342 + | LysR family transcriptional regulator Ajs_4070 4340502 - 4341941 + | tricarballylate dehydrogenase TERM 3501 4343164 - 4343137 - g 89 -10.6 -4.22652 | gap 1, opp_overlap 4343137 4343138, overlap 4343138 CCACACCACCGAAAA GCGCCAGCCCAAC CCT ATCGGGCTGG-GC AGCGATTGATTGCTT TERM 3502 4343168 - 4343138 - g 72 -13.3 -3.13109 | gap 1, opp_overlap 4343137 4343138 4343166, overlap 4343137 CACACCACCGAAAAG CGCCAGCCCAACCC TATC GGGCTGGGC-AGCG ATTGATTGCTTCTAA Ajs_4071 4341947 - 4343173 + | CitB domain-containing protein TERM 3503 4343273 - 4343263 - T 72 -2.4 -4.72272 | overlap 4343264 4343265 CGTTGCGATCAAAAA GGGC CAG GCGC AAGGCGCCAAACGAA TERM 3504 4343307 - 4343289 - T 83 -14.6 -3.51976 | overlap 4343285 AAGGCGCCAAACGAA GCTGGGGT GCT ACCCCAGC GAGGCTTGGCAACGC Ajs_4072 4344589 - 4343510 - | integrase catalytic subunit TERM 3505 4344737 - 4344717 - g 83 -3.1 -5.14563 | overlap 4344718 CTCGCCATGAAAAAA CGCACCCTG ATC CAGGCCGCC GCCGTGGCCCTCACC Ajs_4073 4344708 - 4345685 + | hypothetical protein Ajs_4074 4346312 - 4345827 - | NUDIX hydrolase TERM 3506 4346505 - 4346554 + H 100 -23.8 -2.90075 | gap 2 GGCGCTGTGGGCCAA CGTGCAGGTGCGCCAGG-CG-CTG CCGG CAGTCGACCTGGCGCACCTGGACG TCTGCTTCGCCGCAC TERM 3507 4346843 - 4346897 + G 79 -11.3 -3.97947 | gap 1, overlap 4346847 GCTGGCGCCTTCCGT TGTTTGCCTGCGCGCTGATCTGCCGC CCCC GCGGCCGAGCAGCGC-CGGGCGTGGA TTTCTCATGACTGCA TERM 3508 4346847 - 4346893 + G 87 -18.7 -2.72152 | gap 1, overlap 4346843 GCGCCTTCCGTTGTT TGCCTGCGCGCTGATCTGCCGC CCCC GCGGCCGAGCAGCGC-CGGGCG TGGATTTCTCATGAC Ajs_4075 4346823 - 4349000 + | TonB-dependent copper receptor Ajs_4076 4349607 - 4349107 - | GCN5-related N-acetyltransferase Ajs_4077 4350320 - 4349604 - | riboflavin synthase subunit alpha Ajs_4078 4353267 - 4350451 - | hypothetical protein TERM 3509 4351005 - 4350979 - G 70 -11.6 -3.35996 | opp_overlap 4350982 4350984, overlap 4350984 4350985 CATGTGCATGGAGAA CAAAATCCGCTG GCG CAGCGGGTCTTG ATGAAACAGCGACGG TERM 3510 4351000 - 4350984 - G 85 -7.9 -4.79352 | opp_overlap 4350982 4350984, overlap 4350979 4350985 GCATGGAGAACAAAA TCCGCTG GCG CAGCGGG TCTTGATGAAACAGC TERM 3511 4350999 - 4350985 - G 70 -11.4 -3.46888 | opp_overlap 4350984 4350982, overlap 4350984 4350979 CATGGAGAACAAAAT CCGCTG GCG CAGCGG GTCTTGATGAAACAG Ajs_4079 4353876 - 4353274 - | hypothetical protein Ajs_4080 4355072 - 4353879 - | hypothetical protein TERM 3512 4354034 - 4353992 - G 73 -12.1 -3.35679 | opp_overlap 4354032 CTGTGGCAGGCACAA CGCG-TGTGCCTTCGGCCGAA GGC TCCAGCCGCA-GCACATCGCG CGGGTCCACGCTGCT TERM 3513 4354952 - 4354911 - G 77 -5.1 -4.59109 | gap 1, overlap 4354912 CACATCGCGCAAAAA CCGGAACACATCCAGCAGGT TGG ACTTGCCCGAGGCGTTC-GG CCCAATCACGAACAC Ajs_4081 4358361 - 4355050 - | DNA methylase N-4/N-6 domain-containing protein TERM 3514 4355173 - 4355155 - G 70 -10.2 -3.73775 | GTCACCGGCAGCAAA CGGCAGCG ACA CGGTGCCG GTGAAGGCTTGCAGC TERM 3515 4356039 - 4356059 + g 83 -4.6 -5.00616 | CGTTGGCGGCAATGC TGCGGTCC ATCTC GGCCTGCA TTTTTTGCCGGGCGG TERM 3516 4356597 - 4356615 + g 72 -5.2 -4.30719 | overlap 4356603 CCACCGCTAATGGAT GCGTTTGT ACG ACGTACGC TTTCTTATCGGAAAA TERM 3517 4357384 - 4357437 + g 70 -3.7 -4.56775 | gap 1, overlap 4357387 4357390 4357392 4357432 GTTGCTGCCGTACTT GATGCCGTAGGGCGGGTCGATGTAGA TCA TCTGCACCTGCCCGGCC-ATGCCTTC TTTTTGCAGCAGGCT TERM 3518 4357951 - 4357969 + g 70 -2.3 -4.57569 | GCTTTCAGCGTTCAC CAGGCCC ACTTC GGGGTTG TTTTTGCGCCGGTCG TERM 3519 4358139 - 4358160 + g 74 -10.1 -3.84451 | gap 1, overlap 4358140 GCGCGCCGGTGGCCC GGGCGGTGGC GCC GCCGC-GCCC TTTGCCTTTGACGGC Ajs_4082 4360085 - 4358718 - | integral membrane sensor signal transduction histidine kinase TERM 3520 4359896 - 4359839 - G 72 -13.9 -3.07344 | gap 1, opp_overlap 4359893, overlap 4359837 CCACCTGCCAATACA GGCCCGACAGCGGCTGCGCCAGCC-GCG CAT CACCGGCCAGCGGCGCCACGGCCGTGCC GCCCTGCGGGGTCCA Ajs_4083 4360753 - 4360082 - | two component transcriptional regulator Ajs_4084 4361082 - 4360753 - | membrane protein TERM 3521 4361616 - 4361660 + G 73 -4.2 -4.68994 | gap 2, overlap 4361610 4361618 4361619 CGCCGTTCTGCCCTG GCTCACCGACGCCCGGGGCTTT GCC AAGGACCTGGGCGA-GATG-GC TTTTTACCTGCTGCT TERM 3522 4362262 - 4362278 + G 70 -10.1 -3.73953 | GTGTGGGTGGCGGGT GGCGTGG GCA TCACGCC TTTCCTGGCGCTGCT Ajs_4085 4361230 - 4362699 + | ferric reductase domain-containing protein Ajs_4086 4362713 - 4363048 + | hypothetical protein Ajs_4087 4363088 - 4363570 + | hypothetical protein Ajs_4088 4363585 - 4365762 + | oxidoreductase FAD/NAD(P)-binding subunit Ajs_4089 4365743 - 4366726 + | ApbE family lipoprotein Ajs_4090 4366829 - 4367146 + | hypothetical protein TERM 3523 4367160 - 4367206 + T 74 -12.3 -3.53012 | opp_overlap 4367160 4367163, overlap 4367163 GACGGGACGAGGCAA GGAGCTGGAGCCCG-CGGGGC CGCTTAT GCGCCGCCGGGCTCCA-CGCC TTTCCACGCCGCAGC TERM 3524 4367205 - 4367163 - T 72 -13.5 -2.76263 | gap 2, opp_overlap 4367160 4367163, overlap 4367160 GGGACGAGGCAAGGA GC-TGGAGCCCG-CGGGGC CGCTTAT GCGCCGCCGGGCTCCACGC CTTTCCACGCCGCAG TERM 3525 4367163 - 4367205 + T 72 -13.5 -2.71712 | gap 2, opp_overlap 4367163 4367160, overlap 4367160 GGGACGAGGCAAGGA GC-TGGAGCCCG-CGGGGC CGCTTAT GCGCCGCCGGGCTCCACGC CTTTCCACGCCGCAG Ajs_4091 4367650 - 4367183 - | hypothetical protein Ajs_4093 4370302 - 4368551 - | twin-arginine translocation pathway signal Ajs_4094 4371947 - 4370382 - | spermidine synthase Ajs_4095 4374643 - 4371944 - | type III restriction enzyme, res subunit TERM 3526 4372186 - 4372148 - G 72 -5.1 -4.386 | gap 1, overlap 4372150 4372175 4372176 GAAGTCGGCATAAAA GCGCCCGCGCGAGGTGGG CAGG CCAAAGCCGCA-GGGCGC GGTGTCCAGGTTGCG Ajs_4096 4376540 - 4374903 - | DNA methylase N-4/N-6 domain-containing protein TERM 3527 4375319 - 4375303 - G 72 -4.3 -4.52589 | overlap 4375304 4375305 TGTTGCCAGACAAAA GCCGCCA GCG TGGCGAA GCGTACCTCGGGGTG TERM 3528 4375369 - 4375358 - G 70 -3.6 -4.56597 | CTTGTGCGTCAAAAA CGGG AGCA CCCA GGCGGGCGAAGCGAA Ajs_4097 4376841 - 4376620 - | hypothetical protein Ajs_4098 4378387 - 4376891 - | putative transmembrane protein TERM 3529 4377070 - 4377089 + g 71 -12.1 -3.29461 | opp_overlap 4377083 CGGGCCCCGCGTCCT GGCGGCG AAACAG CGCCGCC TTGTCACCCAGCTTG TERM 3530 4377696 - 4377716 + g 75 -6.7 -4.3534 | GGCGCGCCGCAATGG GGGCAGCTG AAC TGGCGGCCC TTTTCCTCCTTGGCG Ajs_4099 4379585 - 4378470 - | putative transmembrane protein TERM 3531 4379911 - 4379880 - g 79 -5 -4.72272 | overlap 4379882 TTCTTCCATGAAAAA GCCTGGGAGCGC GCCCGCCA GCGCCGCGAGGC ACAGGCACACGCCCC Ajs_4100 4379691 - 4379957 + | hypothetical protein TERM 3532 4380172 - 4380162 - T 72 -2.4 -4.72272 | overlap 4380163 4380164 CGTTGCGATCAAAAA GGGC CAG GCGC AAGGCGCCAAACGAA TERM 3533 4380206 - 4380188 - T 83 -14.6 -3.51976 | overlap 4380184 AAGGCGCCAAACGAA GCTGGGGT GCT ACCCCAGC GAGGCTTGGCAACGC Ajs_4101 4380702 - 4380397 - | flagellar basal body rod protein Ajs_4102 4381695 - 4380757 - | LysR family transcriptional regulator TERM 3534 4381499 - 4381480 - G 70 -10.6 -3.59979 | GGGCGTGAGCGCAAA GCCCGCGC GCCC GCGCCGGC ACAGCGTCAGGCCCA TERM 3535 4381665 - 4381681 + g 93 -5 -5.28481 | overlap 4381664 GCTGCCCCAGCACGG CGCGCG GACGG CGGGCG TTTTTTACTTGCATG Ajs_4103 4381710 - 4383140 + | beta alanine--pyruvate transaminase TERM 3536 4383478 - 4383462 - g 75 -4.3 -4.63218 | overlap 4383471 4383473 GCTGCTCGAAGAAAA CGCCGAC AAG ATCGCCG CGCTGATCACCGCCG Ajs_4104 4383208 - 4384725 + | methylmalonate-semialdehyde dehydrogenase [acylating] Ajs_4106 4386204 - 4388516 + | malic enzyme TERM 3537 4388588 - 4388608 + F 74 -2.5 -4.84359 | overlap 4388566 4388584 CCCATTTTTTGGGCA GGCGC TTGCCTTATGT GCGCC TTTTTGTCACACTAG TERM 3538 4388941 - 4388926 - g 72 -8.2 -4.15044 | opp_overlap 4388934 CTCCCCCTGAAGAAA CGCGGC TATT ACCGCG AATACACGGTGCGCA TERM 3539 4388975 - 4388948 - g 86 -17.8 -3.08073 | gap 1, opp_overlap 4388934 ATTACCGCGAATACA CGGTG-CGCACGC CGG GCGTGCGCCACCG GGGAGCGCGGCGCAT TERM 3540 4388982 - 4389027 + G 75 -13.9 -3.34398 | gap 1, overlap 4388934 4388978 4388984 GCGCCACCGGGGAGC GC-GGCGCATCGTGTGCGGGGG CGC TCCCCGCACACCGGACGCCTGC TATTTCACCAGCGAC TERM 3541 4388984 - 4389024 + G 76 -15.3 -2.84325 | overlap 4388934 4388982 4388978 GCCACCGGGGAGCGC GGCGCATCGTGTGCGGGGG CGC TCCCCGCACACCGGACGCC TGCTATTTCACCAGC Ajs_4107 4388671 - 4389075 + | guanine-specific ribonuclease N1 and T1 Ajs_4108 4389216 - 4389641 + | hypothetical protein TERM 3542 4389873 - 4389837 - T 86 -16.5 -3.14132 | opp_overlap 4389837 4389838, overlap 4389840 CGGCCGCGTGATGAA GCATGACCGGCCGCAGC CCT GCCCCGGCCGGTCACGG TTTTGCGCTTTGAAT TERM 3543 4389837 - 4389873 + T 86 -12.1 -4.24404 | opp_overlap 4389837 4389840, overlap 4389838 CGGCCGCGTGATGAA GCATGACCGGCCGCAGC CCT GCCCCGGCCGGTCACGG TTTTGCGCTTTGAAT TERM 3544 4389838 - 4389872 + T 83 -15.6 -3.13919 | opp_overlap 4389837 4389840, overlap 4389837 GGCCGCGTGATGAAG CATGACCGGCCGCAGC CCT GCCCCGGCCGGTCACG GTTTTGCGCTTTGAA TERM 3545 4389870 - 4389840 - T 87 -19 -2.77899 | opp_overlap 4389838 4389837, overlap 4389837 CCGCGTGATGAAGCA TGACCGGCCGCAGC CCT GCCCCGGCCGGTCA CGGTTTTGCGCTTTG Ajs_4110 4390697 - 4389936 - | dimethyladenosine transferase Ajs_4111 4392109 - 4390694 - | PpiC-type peptidyl-prolyl cis-trans isomerase TERM 3546 4391042 - 4391003 - G 72 -14.1 -3.01712 | GCCGTCCTGCGAATA CTCGCGTGCCAGCGCCG CGAAGT CGGCGCCGCCGCGCGCG ACGCGATCGCGCAGA Ajs_4112 4394506 - 4392155 - | organic solvent tolerance protein TERM 3547 4395694 - 4395738 + G 77 -9.8 -3.89822 | overlap 4395695 ATCTTCGCGCGCCTG ACGCTGCGCGACGGCAAG CCCAAGTAC CTGGCCGACGCGCCGCGC TTTATCGCCTACATC Ajs_4113 4394695 - 4395858 + | aminoglycoside phosphotransferase TERM 3548 4395876 - 4395908 + F 75 -13.4 -3.01831 | opp_overlap 4395867 4395874 4395873, overlap 4395873 4395871 TTACAAGCCAAATCG GCCTCCAGCGCTTG TCCAT CAAGCGCTGGCAGC TACTATTTTTGAAAG TERM 3549 4396249 - 4396210 - g 82 -11.4 -4.07568 | gap 1 CTGGCTGGTGGAAAA GGCCACCGAGCTGGGTGCC GCG AGCATCCAGC-CGATTGCC GCGGCACGCAGCGTG Ajs_4114 4395926 - 4396654 + | hypothetical protein Ajs_4115 4396654 - 4398081 + | hypothetical protein Ajs_4116 4398074 - 4398796 + | hypothetical protein TERM 3550 4401610 - 4401555 - g 79 -13.1 -3.75024 | gap 2, overlap 4401552 CGTGACCAGCAAGAA GCCCGCCGGCAGCCGCTGGGCGCCGCC CATC GCCGTGGCCAAGCGGC-GC-GGCGTGC CGGAGCTCAAACCCC Ajs_4117 4398802 - 4401636 + | SMC domain-containing protein TERM 3551 4401694 - 4401663 - g 71 -15.2 -2.57192 | gap 1, overlap 4401659 ACGCAACCCAACGGA CACAG-GCGCCGTAC GCG GCACGGCGCACCGTG GACGAGCCTGCCAAA Ajs_4118 4401633 - 4402382 + | hypothetical protein TERM 3552 4403134 - 4403152 + G 74 -10.3 -3.85698 | GGTCATGATCGCGGT GGTGCTG GCCAG CAGCACC TTTCTCACCACGCGC TERM 3553 4403675 - 4403652 - g 71 -14.6 -2.62983 | gap 1 CCCACGGCGAGAGCA CCGCCGCGCTG CTG CAGCGCG-CGG ACGCGGCCCTCTACG Ajs_4119 4402586 - 4403734 + | diguanylate cyclase Ajs_4120 4404677 - 4403802 - | alpha/beta hydrolase fold Ajs_4121 4406155 - 4404692 - | peptidase M20 TERM 3554 4406196 - 4406182 - R 70 -7.8 -4.07885 | TATCGGTGCGCAAAA GGCGCA GGA TACGCC AACACCCGCCGCCCG TERM 3555 4406418 - 4406436 + r 83 -14.6 -3.51976 | overlap 4406414 GCGTTGCCAAGCCTC GCTGGGGT AGC ACCCCAGC TTCGTTTGGCGCCTT TERM 3556 4406452 - 4406462 + r 72 -2.4 -4.72272 | overlap 4406440 4406439 TTCGTTTGGCGCCTT GCGC CTG GCCC TTTTTGATCGCAACG Ajs_4122 4407693 - 4406506 - | diguanylate cyclase Ajs_4123 4409798 - 4407774 - | methyl-accepting chemotaxis sensory transducer TERM 3557 4409108 - 4409088 - G 71 -12.5 -3.25823 | opp_overlap 4409081 GGGGTGGTACACGAA GCCGGCCTG CTC CAGCCCGGC GCCGGGGTTGATCAC Ajs_4124 4410637 - 4410053 - | methionine biosynthesis protein MetW TERM 3558 4410116 - 4410155 + g 73 -9.2 -4.02817 | gap 1 CAGCCAGCGCACCTC GC-GCCCGTCCTGCAGGCC GAA GGCGTCCAGGATGCGCAGC TTGTTCTTGTGCGCC metX 4411773 - 4410634 - | homoserine O-acetyltransferase TERM 3559 4411808 - 4411781 - R 100 -13.4 -5.2422 | AACGACATGAAAAAA CCCGGCTTCGCT AAAC AACGAGGCCGGG TCCGGGTGCGTGCTG Ajs_4126 4412488 - 4411910 - | hypothetical protein Ajs_4127 4412966 - 4413331 + | RNP-1 like RNA-binding protein TERM 3560 4413368 - 4413353 - f 100 -10.4 -5.47218 | opp_overlap 4413353 GCTGAGTCAAAAAAA GGAGCC TTAG GGCTCC TTTTTTTTGCGTCAG TERM 3561 4413353 - 4413368 + F 100 -10.4 -5.81412 | opp_overlap 4413353 GCTGAGTCAAAAAAA GGAGCC TTAG GGCTCC TTTTTTTTGCGTCAG TERM 3562 4413823 - 4413852 + G 73 -11.3 -3.73775 | gap 1, opp_overlap 4413808 4413823 GCCCGTCCCATGGAA GCGCGCCCCCCCCG CAG CGGTGGCGGCG-GC TTTGGTGGGGGTGGC Ajs_4128 4413574 - 4414023 + | RNP-1 like RNA-binding protein TERM 3563 4414064 - 4414079 + T 95 -10.4 -4.5442 | opp_overlap 4414064, overlap 4414059 GCTCCACCATCACAA GGCTCC CTCG GGAGCC TTTTGTCCTTCCAGG Ajs_4129 4414909 - 4414097 - | short chain dehydrogenase Ajs_4130 4415535 - 4414915 - | hypothetical protein Ajs_4131 4416110 - 4415532 - | 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase Ajs_4132 4417111 - 4416110 - | KpsF/GutQ family protein TERM 3564 4417614 - 4417634 + G 70 -13.3 -3.02144 | AGAGCGAGCATGGGC GCAGGGTGC TGG GCATCCTGC TGTTCCAGGACCTGG Ajs_4133 4417160 - 4419145 + | potassium efflux system protein Ajs_4134 4419216 - 4419770 + | adenine phosphoribosyltransferase Ajs_4135 4419847 - 4420926 + | integrase catalytic subunit TERM 3565 4421006 - 4420996 - T 72 -2.4 -4.72272 | overlap 4420997 4420998 CGTTGCGATCAAAAA GGGC CAG GCGC AAGGCGCCAAACGAA TERM 3566 4421040 - 4421022 - T 83 -14.6 -3.51976 | overlap 4421018 AAGGCGCCAAACGAA GCTGGGGT GCT ACCCCAGC GAGGCTTGGCAACGC Ajs_4136 4422095 - 4421256 - | hypothetical protein Ajs_4137 4422765 - 4422232 - | cyclic nucleotide-binding protein Ajs_4138 4424271 - 4422811 - | tRNA modification GTPase TrmE TERM 3567 4423139 - 4423170 + g 75 -15.8 -2.77013 | gap 1, opp_overlap 4423113, overlap 4423142 CTCTCACCCTCGCGC GCAGGCGCCGCCGCC TGC GG-GGCGGCGTCGGC CTTGTTCCAGACGTC TERM 3568 4423142 - 4423171 + g 77 -13.5 -3.62046 | gap 1, opp_overlap 4423113, overlap 4423139 TCACCCTCGCGCGCA GG-CGCCGCCGCCT GCG GGGCGGCGTCGGCC TTGTTCCAGACGTCG TERM 3569 4424296 - 4424278 - R 81 -13.1 -3.71848 | overlap 4424250 CCGCGCCATGAAGAA GGCCCGC GCGGG GCGGGCC TGGGGCGTGCATCAC Ajs_4139 4426015 - 4424429 - | extracellular solute-binding protein TERM 3570 4424795 - 4424811 + g 72 -11.5 -3.62032 | opp_overlap 4424795 CACGCGGGTGACGAA CTGCGCC ATA GGCGCGG TTTGCAGGTTGGTCT TERM 3571 4426106 - 4426084 - R 100 -19.2 -4.21812 | overlap 4426087 TCGTACCGAAAACAA CAACGGCCGC TGA GCGGCCGTTG CAGGGAGCAGGGGAT TERM 3572 4426103 - 4426087 - R 100 -15.1 -4.22475 | overlap 4426084 TACCGAAAACAACAA CGGCCGC TGA GCGGCCG TTGCAGGGAGCAGGG Ajs_4140 4427858 - 4426146 - | protein translocase subunit yidC Ajs_4141 4428151 - 4427855 - | hypothetical protein TERM 3573 4427941 - 4427915 - G 72 -8.7 -4.09685 | gap 1, overlap 4427917 CGTGAGCCGTGAAAA CAGGCGCATGCC GCGC GGCA-GCTCCTG CGGCACGGGGTCCAG Ajs_4142 4428621 - 4428148 - | hypothetical protein TERM 3574 4428313 - 4428277 - G 75 -11.6 -3.72576 | gap 2 CTGCTTGCGATCAAA GCCCATGCGCAGGCGCAC CAC GTGCGCGC-CGC-TGGGC ATGCGCGCCTCGAAC TERM 3575 4428491 - 4428448 - G 93 -15.5 -4.05446 | gap 3 CCCTCCAACGAGAAA CAGGGCCTGCGATCCCTGCGCC TGC GGCG-AGGAATCG--GGCCCTG TGGCTGGCGGAACTC Ajs_4143 4428826 - 4428692 - | 50S ribosomal protein L34P Ajs_4144 4429148 - 4430569 + | chromosomal replication initiator protein DnaA Ajs_4145 4430714 - 4431820 + | DNA polymerase III, beta subunit TERM 3576 4431916 - 4431889 - f 77 -13.4 -3.31263 | gap 1 ATTTGATTCCTATAA GGC-CGCCGGCAC GCC GTGCCGGTGCGCC TGGACCGAAGGCAGC Ajs_4146 4431938 - 4434544 + | DNA gyrase subunit B TERM 3577 4434600 - 4434621 + T 85 -10.2 -4.2828 | opp_overlap 4434600 CGTCAGTGAGAAAAA GCCATGGA CCAACA TCCATGGC TTTTCATCGCTGGAG TERM 3578 4434621 - 4434600 - T 100 -10.9 -4.87665 | opp_overlap 4434600 CGTCAGTGAGAAAAA GCCATGGAC CAAC ATCCATGGC TTTTCATCGCTGGAG Ajs_4147 4435003 - 4434698 - | hypothetical protein TERM 3579 4434797 - 4434781 - G 77 -8 -4.30576 | GCGCCAGCATGAAAA CGGCAA CGACC TTGCCG CTCGTGCGCAGCAGC TERM 3580 4435041 - 4435016 - H 80 -6.1 -4.72986 | gap 1, overlap 4435030 CATGGCTATCAAAAA GCAACCGGCAGC AAT GC-ATCGGTTGC AGCCCTTCACACCAT TERM 3581 4435229 - 4435188 - g 100 -12.1 -4.7497 | gap 1, opp_overlap 4435218 4435220 GCGATCTATGAAAAA GCGGAGCATGAGGCGCTGGC CAC GCCCGCGCA-CGTGCACCGC ACGCTGTTCTGCGCC TERM 3582 4435268 - 4435302 + G 86 -17.8 -3.02013 | overlap 4435265 GGTGCACGGCCTGAT CTGCGAGGCCGGCGGC ACC GCCGTGGGCTTCGCGG TGTACTTCTTCAACT Ajs_4148 4435101 - 4435622 + | GCN5-related N-acetyltransferase TERM 3583 4436005 - 4435977 - g 77 -2.9 -4.84914 | ACCCACAGAAGAAAA GCCCCAAGCCCGG CTA CTGCGCCTACGGC GCGCGCGAGCGGCAG Ajs_4149 4435619 - 4436032 + | hypothetical protein TERM 3584 4436073 - 4436116 + F 73 -10.9 -3.56643 | gap 1, opp_overlap 4436070, overlap 4436075 CGCCGCAAGCCAGCG GCCGCCCACCTGCGCCGCGC GCGCG GCGTGGTGT-GATGGGCGTC TTTGCACACTGTGGA TERM 3585 4436075 - 4436114 + F 72 -12.1 -3.36073 | gap 1, opp_overlap 4436070, overlap 4436073 CCGCAAGCCAGCGGC CGCCCACCTGCGCCGCGC GCGCG GCGTGGTGT-GATGGGCG TCTTTGCACACTGTG Ajs_4150 4436139 - 4436576 + | OsmC family protein Ajs_4151 4436573 - 4437352 + | hypothetical protein Ajs_4152 4437732 - 4437439 - | acylphosphatase Ajs_4153 4437773 - 4438006 + | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein TERM 3586 4438141 - 4438169 + G 72 -11.7 -3.53012 | gap 1, overlap 4438139 TCTCCACCTCCCAGC CGCTGGCCGCGC AGGCCG GCGCGGC-GGCG TTTGCGCGCGGCGGC TERM 3587 4438904 - 4438946 + G 86 -16.3 -3.55071 | gap 1 CACCGCAGCGGGCTC GGCCGCGCGCATGCACCTGG AGAT CGAGGC-CATGCGCGTGGCC TTTGCCGACCTGTAC Ajs_4154 4438068 - 4439663 + | gamma-glutamyltransferase 2 TERM 3588 4439901 - 4439934 + F 73 -13.2 -3.14051 | gap 2, overlap 4439899 CGGCGACCTAGCGCA CGCGCAGGGTGGCCGC ACCG GCGGCC-CCCTG-GTG TCTTCCTCCCCCTCC TERM 3589 4439958 - 4439976 + F 100 -7.4 -5.63504 | opp_overlap 4439958 CCCCTCCGAACGAAA CCCAGC CCCGGCC GCTGGG TTTTTTTGTGGGCTT TERM 3590 4440882 - 4440918 + G 77 -15.7 -3.06302 | GCCGCGTGGCCATCC AGCTGCGCGTGCACCCG GCC CTGGTGCCCGCGCGGCA TTCGCTGGCGCTGCT TERM 3591 4440950 - 4440985 + G 89 -9.8 -4.56597 | gap 2, opp_overlap 4440949, overlap 4440950 GACGGCGCGACCAAC GG-GCTGCTGG-TGCG CGGCGA CGCAGCCGGCAGCGCC TTTTTCAGCGGCGCG Ajs_4155 4440017 - 4441432 + | homoserine dehydrogenase Ajs_4156 4441793 - 4441485 - | hypothetical protein TERM 3592 4442356 - 4442339 - g 75 -9.1 -4.08144 | opp_overlap 4442350, overlap 4442342 CTGACCAATCAGAAA CAAGGCG TGAG CGCCCTG GGGCTGCAGCGCGTA Ajs_4157 4442036 - 4443037 + | hypothetical protein TERM 3593 4444905 - 4444867 - g 72 -15.2 -2.78384 | CCTCGCGCGAGCAGA TGCGCCAGGCCGTGGACA TGC TGCCCACCGCCATGCGCA GCGCCGTGCTGGTGC dinG 4443051 - 4445327 + | ATP-dependent DNA helicase DinG Ajs_4159 4445512 - 4445709 + | hypothetical protein TERM 3594 4445795 - 4445840 + F 81 -13.2 -3.74693 | gap 1 GGCTACGATTACGCA CCGGTGCCG-GTGGCCCGTGC CTATC GCACGGGGTGCGCGGGGCCGG TTTCCTGCCGTCCCG Ajs_4160 4445857 - 4446513 + | DNA polymerase III, epsilon subunit TERM 3595 4446521 - 4446547 + F 75 -2.9 -4.8269 | gap 1, overlap 4446522 4446524 TGGGGTAGCTCCCCC CGCCCTTGTTGC GGGC GCTACA-GGGCA TTTTTCATCCTTCTC Ajs_4161 4446722 - 4447228 + | pyridoxamine 5'-phosphate oxidase-related, FMN-binding TERM 3596 4447485 - 4447517 + T 77 -13.4 -3.33696 | gap 1, overlap 4447473 GGGCGGCATGCAGCA CGGGAGCGCTGCCGT ATTC GCGGC-GCGCTCGCG TTCGTTAAAACACCG Ajs_4162 4448850 - 4447522 - | GntR family transcriptional regulator