TransTermHP v2.07 (built on Jan 21 2009) 25 bins; sample size is 20000000 --pval-conf=/fs/szasmg2/carlk/TTupdate2/expterm.dat --gc=-2.3 --au=-0.9 --gu=1.3 --mm=3.5 --gap=6 --max-len=59 --min-stem=4 --max-loop=13 --min-loop=3 --uwin-length=6 --uwin-require=3 --max-hp-score=-2 --max-tail-score=-2.5 --loop-penalty=1,2,3,4,5,6,7,8,9,10,11 --start-cut=0 --end-cut=25 Genes: 0.583194 %AT, 3075414 nt, 22152 terms. Intergenic: 0.669183 %AT, H2T: 361688 nt, 3065 terms; T2T: 94442 nt, 2331 terms; H2H: 145304 nt, 2107 terms. Each terminator entry starts in column 3 and is of the form: term # start - end +/- regionconf hp tail | notes Followed by the sequence of the 5' tail, 5' stem, loop, 3' stem, and 3' tail. Genes are interspersed, and start the first column. SEQUENCE gi|50083297|ref|NC_005966.1| Acinetobacter sp. ADP1, complete genome (length 3598621) dnaA 201 - 1598 + | DNA replication initiator protein, transcriptional regulator of replication and housekeeping genes dnaN 1834 - 2982 + | DNA polymerase III, beta chain TERM 1 3038 - 3076 + G 73 -2.5 -5.24129 | gap 1, opp_overlap 3043 3044, overlap 3038 3044 AACGTGTGCGCAATT TA-AAAGCGGTTGCACTC TCTG GATTGCAGCCGTTTAATA TTTTTTATGGCGCCA TERM 2 3044 - 3069 + G 88 -9.7 -4.20024 | opp_overlap 3043 3044, overlap 3038 3038 TGCGCAATTTAAAAG CGGTTGCACTC TCTG GATTGCAGCCG TTTAATATTTTTTAT TERM 3 3121 - 3107 - g 73 -7.2 -4.18197 | ACGGTTCAGGTAAAA CTTCTA TTC TAGAAG CGGTCCATCTTCTGG recF 2998 - 4074 + | DNA replication, recombinaison and repair protein gyrB 4127 - 6595 + | DNA gyrase, subunit B (type II topoisomerase) TERM 4 6626 - 6644 + T 100 -13.2 -5.4477 | opp_overlap 6626 AACACCATAAAAAAA TCAGGCAC ACA GTGCCTGA TTTTTTTGACCATTT TERM 5 6644 - 6626 - T 100 -13.2 -5.70829 | opp_overlap 6626 AACACCATAAAAAAA TCAGGCAC ACA GTGCCTGA TTTTTTTGACCATTT ACIAD0005 6948 - 6712 - | hypothetical protein TERM 6 7018 - 7032 + G 79 -8.6 -4.08216 | CAGGCGAACTGTTTT GGTCAT TTA ATGACC TTTTAAAAACAGTAG ACIAD0006 6969 - 7139 + | hypothetical protein TERM 7 7276 - 7266 - T 80 -6.8 -4.66347 | ATTAAAAAATATAAA GCTG TAA CAGC GGGCAATTAAATGTT ACIAD0007 9270 - 7336 - | ABC transporter ATP-binding protein TERM 8 9190 - 9213 + g 70 -5.2 -4.56597 | TAAACCAATTTTCCA GCCTGGATGC AATT GCATCGATGC TTTTTGAAAGAGGAC TERM 9 9989 - 9971 - g 86 -11.8 -2.93073 | opp_overlap 9968, overlap 9968 9973 CGTTCCCAATAACCA GATTGCAC AAC GTGCAATC AGCTATGTACTAGAT TERM 10 10045 - 10024 - g 71 -4.4 -4.77157 | overlap 10027 GCAATGCAGCAAAAA TGACCACC AATCTG GGTGGTAA AAAATATGAAGTTGC ACIAD0008 9651 - 10661 + | putative RND type efflux pump involved in aminoglycoside resistance (AdeT) TERM 11 10681 - 10699 + F 93 -7.4 -5.4833 | opp_overlap 10681 GATTTTTAAGGAAAA GTCCGG ATAAATG CCGGAC TTTTTTATTGAATAA TERM 12 10699 - 10681 - f 81 -7.4 -4.41494 | opp_overlap 10681 GATTTTTAAGGAAAA GTCCGG ATAAATG CCGGAC TTTTTTATTGAATAA TERM 13 10868 - 10856 - f 73 -7.7 -3.73336 | ATCGCAATTGAATAA GAAGC AGT GCTTC AGATAAGTCTTCAAT TERM 14 10949 - 10935 - g 76 -2.8 -5.37043 | overlap 10936 ACTGGACACAAAAAA TCATGG CCA CCATTA CACTGGGTGTACTGG adeT 10910 - 11920 + | RND type efflux pump involved in aminoglycoside resistance ACIAD0010 12039 - 12374 + | iron-sulfur cluster insertion protein ErpA TERM 15 12425 - 12396 - T 100 -15.3 -3.2794 | opp_overlap 12404, overlap 12404 CTGGATTCAGAGCAA TAAAAAAATCCCC GAAA GGGGATTTTTTTA TTGGCCAGAATTAAA TERM 16 12404 - 12417 + T 100 -8.1 -5.7946 | opp_overlap 12404 12396 AGAGCAATAAAAAAA TCCCC GAAA GGGGA TTTTTTTATTGGCCA TERM 17 12417 - 12404 - T 100 -8.1 -5.85737 | opp_overlap 12404, overlap 12396 AGAGCAATAAAAAAA TCCCC GAAA GGGGA TTTTTTTATTGGCCA anmK 13566 - 12436 - | anhydro-N-acetylmuramic acid kinase TERM 18 12538 - 12521 - G 79 -7.7 -4.36914 | overlap 12522 TGTTGTTGCATAAAA CGCATGG CGAG CCATGCA AACGCGGTTGCTTCA TERM 19 14823 - 14805 - g 84 -5.2 -5.34857 | TGAAAGAAAATAAAA CCTATCTG ATT CAGGCAGG TAAAAAAGCCATTGC tyrS 13646 - 14860 + | tyrosyl-tRNA synthetase TERM 20 14903 - 14866 - f 87 -10.1 -3.96298 | opp_overlap 14867 14876, overlap 14876 TACTGATTAATCAAA CAATAAAAAAGCAGATC ACGT GATCTGCTTTTTTATAT CTAATCAGCGGTCTT TERM 21 14867 - 14902 + F 89 -13.6 -2.78935 | opp_overlap 14866 14876, overlap 14876 ACTGATTAATCAAAC AATAAAAAAGCAGATC ACGT GATCTGCTTTTTTATA TCTAATCAGCGGTCT TERM 22 14893 - 14876 - f 100 -9.9 -5.72254 | opp_overlap 14876 14867, overlap 14866 TCAAACAATAAAAAA GCAGATC ACGT GATCTGC TTTTTTATATCTAAT TERM 23 14876 - 14893 + F 100 -9.9 -5.43414 | opp_overlap 14866 14876, overlap 14867 TCAAACAATAAAAAA GCAGATC ACGT GATCTGC TTTTTTATATCTAAT TERM 24 15556 - 15542 - g 72 -7.8 -3.88291 | opp_overlap 15541 TATTATCTGGATAAA CTCGAC ATT GCCGAG CATTATCAATTATTT TERM 25 15641 - 15627 - g 75 -8.6 -3.89346 | TTTTTATTGGAGAAA GCTTTC GTG GAAAGC AGCAAATGATCCGTG ACIAD0014 15431 - 15685 + | hypothetical protein TERM 26 15710 - 15734 + F 71 -5.7 -4.52703 | opp_overlap 15712 TGTATCCAATCAAAA GTCCAGGTC TTAACTT GGTCTGGAC TTTTATCCTGCTTTC ACIAD0015 15927 - 17882 + | putative 5'-nucleotidase NucA precursor TERM 27 18103 - 18088 - f 81 -6.2 -4.99035 | opp_overlap 18087 TGATGCAGATAAAAA CTTGTT GAGA AACAAG GATTTGGCTAGATTG TERM 28 19931 - 19912 - f 72 -9.2 -2.65808 | opp_overlap 19918, overlap 19909 AGTCGTAACAAGGTA GCCGTAGG GGAA CCTGCGGC TGGATCACCTCCTTA TERM 29 20050 - 20034 - f 81 -10.9 -2.62396 | overlap 20036 20047 CAGTTGGTTAGAGCA CACGCTT GAT AAGCGTG GGGTCACAAGTTCAA TERM 30 20227 - 20281 + F 85 -9.1 -3.91072 | gap 1, opp_overlap 20232 20246 20249, overlap 20246 20249 20276 CGGCTAAGGTGTAGA TTATAGAACTTAGTAAAAAGAAGATC ATGA GATCTTGTTTT-ATTAAGTTCTGTGA TTTATCACAGTTTAG TERM 31 20276 - 20291 + F 73 -7.6 -3.8766 | overlap 20227 TTGTTTTATTAAGTT CTGTGA TTTA TCACAG TTTAGTGTGATCTGA TERM 32 21026 - 21014 - f 89 -9.1 -4.2354 | GAAAGGCGAAAAGAA CCCCT GTG AGGGG AGTGAAATAGATCCT TERM 33 21818 - 21804 - f 80 -7.1 -4.56607 | overlap 21796 TGAGTAACGACAAAA CGGGT GAAAA ACCCG TTCGCCGAAAGACCA TERM 34 23751 - 23775 + F 100 -14.2 -5.60993 | opp_overlap 23751 CTTTTAAATACTAAA GCCCCCAGGC CAAAC GCCAGGGGGC TTTTTTTATGCAAAG TERM 35 23775 - 23751 - f 100 -14.2 -4.00532 | opp_overlap 23751 CTTTTAAATACTAAA GCCCCCAGGC CAAAC GCCAGGGGGC TTTTTTTATGCAAAG ACIAD0017 23916 - 24530 + | putative glutathione S-transferase ACIAD0018 24584 - 24895 + | hypothetical protein TERM 36 24949 - 24923 - T 100 -12.4 -5.09225 | opp_overlap 24923 24926 ATGCTAGCCAAAAAA GAACCCCTATCA TCC TGACAGAGGTTC TTTGTATTCCGATTA TERM 37 24923 - 24949 + T 81 -8 -4.21439 | opp_overlap 24923, overlap 24926 ATGCTAGCCAAAAAA GAACCCCTATCA TCC TGACAGAGGTTC TTTGTATTCCGATTA ACIAD0019 25658 - 25116 - | putative flavoprotein TERM 38 25725 - 25756 + r 89 -11.8 -3.26596 | opp_overlap 25733, overlap 25733 ACTTATTTTCAAGCT TAAAAAAAGCTCTC CGAT GAGAGCTTTTTGTA TTACATTAATTTCAC TERM 39 25733 - 25748 + r 95 -9 -5.1167 | opp_overlap 25733, overlap 25725 TCAAGCTTAAAAAAA GCTCTC CGAT GAGAGC TTTTTGTATTACATT TERM 40 25748 - 25733 - R 95 -9 -5.47399 | opp_overlap 25725 25733 TCAAGCTTAAAAAAA GCTCTC CGAT GAGAGC TTTTTGTATTACATT fkpB 26239 - 25757 - | FKBP-type peptidyl-prolyl cis-trans isomerase (rotamase) lspA 26771 - 26232 - | prolipoprotein signal peptidase (Signal peptidase II.) ileS 29601 - 26764 - | isoleucyl-tRNA synthetase ribF 30667 - 29666 - | bifunctional riboflavin kinase/FMN adenylyltransferase ACIAD0024 30876 - 32000 + | putative malic acid transport protein ACIAD0025 32045 - 32845 + | alpha/beta family hydrolase TERM 41 32890 - 32869 - T 100 -13.1 -4.98255 | opp_overlap 32867 32884, overlap 32884 TTTGAAGCATAAAAA TGCCATCGT AAAA ACGATGGCA CATCCTTAATCAACT ACIAD0026 33535 - 32918 - | TetR/AcrR family transcriptional regulator ACIAD0027 33988 - 35097 + | putative enzyme (monooxygenase) ACIAD0028 35094 - 35831 + | putative amidohydrolase (isochorismatase) TERM 42 36005 - 36027 + G 73 -7.1 -4.09685 | overlap 36007 AGCACAAACCCGTCA TGTGCTTGA GACCA TCAAGCATA TTTTAAGCAATGCAG ACIAD0029 35844 - 36224 + | hypothetical protein ACIAD0030 36303 - 36869 + | putative flavin:NADH reductase (oxydoreductase) TERM 43 37719 - 37709 - g 73 -8.2 -3.63627 | CTGGGACATTTTAAA GCGG TAT CCGC CATGACGGGTCGTAA ACIAD0031 36899 - 38263 + | putative purine permease ACIAD0032 38279 - 39151 + | putative 3-hydroxyisobutyrate dehydrogenase TERM 44 39176 - 39162 - T 89 -11.4 -3.42147 | opp_overlap 39162 CCTAATGAAGACCAA GCCGCA TCC TGCGGC TTTTTTTAGGTGGCT TERM 45 39162 - 39176 + T 100 -11.4 -5.47821 | opp_overlap 39162 CCTAATGAAGACCAA GCCGCA TCC TGCGGC TTTTTTTAGGTGGCT ssuB 39991 - 39182 - | alkanesulfonate ABC transporter ATP-binding protein TERM 46 39522 - 39538 + g 79 -7.9 -4.35044 | opp_overlap 39525, overlap 39525 CCTCCTGACAATTGA GAAGGCC ACT GGCCTGC TTTGTCTTTGAGTCC TERM 47 39535 - 39525 - G 71 -8.2 -3.45054 | opp_overlap 39525 39522 CCTGACAATTGAGAA GGCC ACT GGCC TGCTTTGTCTTTGAG ssuC 40795 - 39995 - | alkanesulfonate ABC transporter membrane protein ssuD 41982 - 40792 - | alkanesulfonate monooxygenase TERM 48 41544 - 41530 - G 75 -8.6 -3.80841 | opp_overlap 41530, overlap 41519 ACGATCACCATGAAA GGTGAA TGA TTCACC TGTATGTGAACGAGT ssuA 43012 - 42005 - | alkanesulfonate ABC transporter periplasmic-binding protein TERM 49 42462 - 42452 - G 73 -8.2 -3.73775 | GGCACCTTTATCAAA CGCG GCA CGCG CATCGGCAGGTGGAA ssuA 44061 - 43039 - | alkanesulfonate ABC transporter periplasmic-binding protein TERM 50 43582 - 43596 + g 70 -5.7 -4.28254 | opp_overlap 43582 GGAGCCTTTATTTAA GGCAA TACGT TTGCC TTTTAAGTCTTGAAC TERM 51 44097 - 44087 - R 72 -2.6 -5.26316 | opp_overlap 44087 CTATTCCATAAAAAA TAAA ATT TTTA ATATTACTTATATAA argA 45789 - 44434 - | N-acetylglutamate synthase TERM 52 45858 - 45882 + r 85 -8.7 -4.24963 | opp_overlap 45858 CCTTCAATAAAAAAA TGTCCAAAC CCGAAAA GTTTGGACA TTTTAAGTGATTATG TERM 53 45882 - 45858 - R 100 -10.1 -5.7946 | opp_overlap 45858 CCTTCAATAAAAAAA TGTCCAAACCC GAA AAGTTTGGACA TTTTAAGTGATTATG ACIAD0040 46203 - 45901 - | putative signal peptide TERM 54 46065 - 46075 + g 91 -6.8 -5.49579 | overlap 46061 TAGGTACAGCCTGGC CTGG ACG CCAG TTTTGTTTTTTGTCC TERM 55 46357 - 46338 - R 100 -9.3 -5.4251 | TTGACATATAAAAAA GCCCGAT ATTTTA ATCGGGC TAAACATGTCACTGA ACIAD0041 46786 - 46379 - | putative signal peptide TERM 56 47036 - 47021 - R 95 -9 -5.08824 | opp_overlap 47021 47020 GTCTCATGCAAAAAA GCATCC CGCA GGATGC CTTATACCGGCTTAA ACIAD0042 47802 - 47056 - | short chain dehydrogenase ACIAD0043 48540 - 47833 - | putative phosphoglycolate phosphatase 2 (PGP 2) ubiG 49253 - 48537 - | 3-demethylubiquinone-9 3-methyltransferase TERM 57 48911 - 48926 + g 70 -7.6 -3.65224 | TGTCATATTGGCCTG CTTGCT CTTG AGCAAG TTCTTCAACTGGAAT dsbA 49432 - 50052 + | thiol:disulfide interchange protein, periplasmic, alkali-inducible TERM 58 50085 - 50105 + T 100 -9.1 -5.49234 | opp_overlap 50085 TGAATGCATAAAAAA GGTTTCTAT GAT GTAGAAACC TTTTTTATTGACTGT TERM 59 50105 - 50085 - T 90 -8.4 -5.31456 | opp_overlap 50085 TGAATGCATAAAAAA GGTTTCTA TGATG TAGAAACC TTTTTTATTGACTGT ACIAD0046 50811 - 50137 - | putative transcriptional regulator TERM 60 50206 - 50229 + g 77 -3.9 -5.0916 | AGGCAAGGACAGTGC CTGATTGAC ATATAG GTTGATCAG TTTTTGTCTTGAGCC ACIAD0047 51540 - 50905 - | hypothetical protein TERM 61 51862 - 51828 - g 73 -2.6 -5.1287 | overlap 51839 TGGACATGGAAAAAA GCCAAAGCACAGGTGG TCT CCATCACGGCTGTGGC TTCCGATTTTTATCA ACIAD0048 51732 - 52754 + | putative oxidoreductase TERM 62 53926 - 53912 - g 77 -3.6 -5.1615 | overlap 53903 GTAAGATTCAAAAAA TGAAAA CGA TCTTCA GCTTGAGCAAATAAG ACIAD0049 52789 - 53940 + | putative linoleoyl-CoA desaturase TERM 63 53990 - 53955 - f 71 -5.4 -4.56775 | opp_overlap 53963 53976, overlap 53942 53941 53963 AGGCTTTTGTAAAAA GCACAGAATTGGGCCG AATT CGGCCCAATTTTATTG GAGTCATTTGTTATA TERM 64 53963 - 53982 + F 100 -13.6 -4.66318 | opp_overlap 53955 53963, overlap 53976 GTAAAAAGCACAGAA TTGGGCCG AATT CGGCCCAA TTTTATTGGAGTCAT TERM 65 53982 - 53963 - f 100 -13.6 -3.72037 | opp_overlap 53963 53976, overlap 53955 GTAAAAAGCACAGAA TTGGGCCG AATT CGGCCCAA TTTTATTGGAGTCAT TERM 66 54513 - 54495 - g 100 -4.6 -6.14618 | TAGAAAAGAAAAAAA TTAAGCAG GAT CCACTTAA AGGTCTGGTGGCTGC rph 54008 - 54763 + | ribonuclease PH (RNase PH), tRNA nucleotidyltransferase TERM 67 54803 - 54778 - f 74 -9.1 -3.04517 | opp_overlap 54783, overlap 54783 AGGTTCTTTTAAAAT CAAAACGCATC TTTG GATGCGTTTTT TTATTTTTATAGTGA TERM 68 54798 - 54783 - f 93 -9 -4.67038 | opp_overlap 54783, overlap 54778 CTTTTAAAATCAAAA CGCATC TTTG GATGCG TTTTTTTATTTTTAT TERM 69 54783 - 54798 + F 100 -9 -6.23317 | opp_overlap 54783 54778 CTTTTAAAATCAAAA CGCATC TTTG GATGCG TTTTTTTATTTTTAT TERM 70 54938 - 54954 + F 73 -8.1 -3.57161 | ATCTATATTTTTTAC CAAACTT CAA AAGTTTG TTATGATTGATGTTT ACIAD0051 54987 - 55442 + | hypothetical protein ACIAD0052 55435 - 55983 + | hypothetical protein TERM 71 56555 - 56541 - g 75 -5.8 -4.5787 | TTAGCAAAAAAAACA TATCTA ATA TAGATA AAAGTAATTTAGATA ACIAD0053 55985 - 56617 + | zinc protease ACIAD0054 56618 - 57070 + | hypothetical protein ACIAD0055 57346 - 57474 + | hypothetical protein TERM 72 57479 - 57469 - f 72 -2.6 -5.31877 | opp_overlap 57469 ATTGAGTATAAAAAA TTTT AGA AAAA TTTGTTGAAAAAACA ACIAD0056 57531 - 57689 + | hypothetical protein ACIAD0057 57779 - 58168 + | hypothetical protein ACIAD0058 58242 - 58427 + | hypothetical protein ACIAD0059 58409 - 58615 + | hypothetical protein ACIAD0060 58923 - 59048 + | hypothetical protein ACIAD0061 59058 - 59261 + | hypothetical protein nadC 60127 - 59258 - | nicotinate-nucleotide pyrophosphorylase (quinolinate phosphoribosyltransferase) TERM 73 60189 - 60169 - H 71 -5.5 -4.61482 | overlap 60172 CGTTTTAAAAAATAA GTATTATTG GCA CAATAATCC ACAAAAGCAGATGCA ampD 60290 - 60880 + | N-acetyl-anhydromuranmyl-L-alanine amidase ACIAD0064 60933 - 62480 + | MviN family virulence factor TERM 74 62509 - 62469 - T 100 -17.1 -4.1899 | opp_overlap 62482, overlap 62471 62474 CCACGCCACTTAAAA CATGAGGCATAAATAAAGC AAC GCTTTATTTATGCCGCAAG ACAAGCGAAGCGCGT TERM 75 62507 - 62471 - T 100 -18.3 -3.69483 | opp_overlap 62482, overlap 62469 62474 ACGCCACTTAAAACA TGAGGCATAAATAAAGC AAC GCTTTATTTATGCCGCA AGACAAGCGAAGCGC TERM 76 62504 - 62474 - T 100 -18.6 -2.95081 | opp_overlap 62482, overlap 62471 62469 CCACTTAAAACATGA GGCATAAATAAAGC AAC GCTTTATTTATGCC GCAAGACAAGCGAAG TERM 77 62482 - 62496 + T 70 -7.2 -3.85698 | opp_overlap 62474 62471 62469 AACATGAGGCATAAA TAAAGC AAC GCTTTA TTTATGCCGCAAGAC TERM 78 62624 - 62662 + T 100 -17.8 -3.64822 | opp_overlap 62634, overlap 62634 CGCAATATCGTGCAT GAATAAAAAACGCTGTCA TCA TGACAGCGTTTTTTATTA TTTGGATGGAAGAAT TERM 79 62652 - 62634 - T 100 -13.2 -5.5112 | opp_overlap 62624 62634 TGCATGAATAAAAAA CGCTGTCA TCA TGACAGCG TTTTTTATTATTTGG TERM 80 62634 - 62652 + T 100 -13.2 -5.72254 | opp_overlap 62634, overlap 62624 TGCATGAATAAAAAA CGCTGTCA TCA TGACAGCG TTTTTTATTATTTGG fklB 63358 - 62660 - | FKBP-type 22KD peptidyl-prolyl cis-trans isomerase (rotamase) TERM 81 63399 - 63375 - R 93 -7.9 -5.42862 | opp_overlap 63378, overlap 63378 ATATTTCCAAAAAAA TAAGGAGAGTA TCG CACTCTCCTTT TTCACTATTTCACTT TERM 82 63378 - 63396 + r 93 -8.9 -4.77986 | opp_overlap 63375 63378 TTTCCAAAAAAATAA GGAGAGT ATCGC ACTCTCC TTTTTCACTATTTCA TERM 83 63396 - 63378 - R 100 -9.6 -4.79949 | opp_overlap 63378, overlap 63375 TTTCCAAAAAAATAA GGAGAGTA TCG CACTCTCC TTTTTCACTATTTCA fkpA 64111 - 63404 - | FKBP-type peptidyl-prolyl cis-trans isomerase (rotamase) TERM 84 63774 - 63808 + g 76 -2.9 -5.33866 | gap 1, overlap 63776 GCAAGAAAATTGTTG CTGCTTGAGGCAGACT GATG AGTTTGA-TCAAGCTG TTTTTTCTGCATTTC TERM 85 64268 - 64249 - R 100 -10.8 -5.06414 | opp_overlap 64249 TTTTGGCAATAAAAA GCCAGATT CTAA AATCTGGC TTTGATCGCTAATTA TERM 86 64249 - 64268 + r 90 -10.8 -3.7791 | opp_overlap 64249 TTTTGGCAATAAAAA GCCAGATT CTAA AATCTGGC TTTGATCGCTAATTA ptk 66491 - 64281 - | tyrosine-protein kinase, autophosphorylates ptp 66937 - 66506 - | low molecular weight protein-tyrosine-phosphatase TERM 87 66590 - 66570 - G 80 -2.5 -5.52384 | overlap 66571 GTGTCATCAAAAAAA GCCTGATCA TGC TGATAAGGG TCTGGCACATTTTTA TERM 88 66718 - 66731 + g 71 -3.1 -5.07567 | gap 1 CTGCCTGCTTAATAT GCGTGG CTT CCA-GC TTTTTTGCAATATGC wza 68037 - 66934 - | polysaccharide export protein TERM 89 68090 - 68073 - H 75 -8.5 -3.35964 | overlap 68071 68070 TTATAAATAAAATTA TAGCTTC AATC GAAGCTA AGAATACCTCAAATT TERM 90 68217 - 68205 - H 71 -3.5 -5.1848 | opp_overlap 68205 AATGAATGTAAAAAA TAAAT TGT ATTTA TCTGATACCAACCAT TERM 91 68462 - 68474 + H 74 -3.5 -5.36441 | overlap 68456 ATATCGTGTTAAAGT TTTAT TTT ATAAA TTTTTTATATGAAAG ugd 68507 - 69670 + | UDP-glucose 6-dehydrogenase TERM 92 70203 - 70189 - g 90 -2.2 -5.92399 | TAATAAAATAAAAAA TACTTT CAA AAAATA TAATTTAGAACTCTT ACIAD0073 69689 - 70573 + | glycosyl transferase family protein TERM 93 71397 - 71407 + G 71 -3.2 -5.00616 | TATGATTTCCTTAAA GGTA ATA TGCC TTTTTTAGAAAAAAA TERM 94 71433 - 71423 - g 84 -2.6 -5.60993 | TTTTTTAGAAAAAAA TAAA ATT TTTA AGCAGATTAAATTTG ACIAD0074 70563 - 71492 + | glycosyl transferase family protein TERM 95 72192 - 72204 + G 84 -3.5 -5.42259 | CTTATTTAAATCCAT TATTT GTT AAATA TTTTTTTGGAGATGC TERM 96 72665 - 72677 + G 70 -2.7 -4.96276 | GCTTTATCAGTTTTT TTAAC AGA GTTGA TTTTGGTTTTTTTAT ACIAD0075 71489 - 72739 + | putative polysaccharide transport protein TERM 97 73152 - 73141 - g 84 -3.6 -5.5208 | GCACAAGATAAAAAA GCAG AGTT CCGC TTTCATCATATTTCA rmlB 72769 - 73839 + | dTDP-D-glucose-4,6-dehydratase rmlD 73858 - 74766 + | dTDP-4-dehydrorhamnose reductase (dTDP-4-keto-L-rhamnose reductase) (dTDP-6-deoxy-L-mannose dehydrogenase) (dTDP-L-rhamnose synthetase) TERM 98 75279 - 75265 - g 78 -4.2 -5.11063 | AGTATTGAAGAAAAA CCTGAG CAG CCCAAG TCTAACTATGCGGTT rmlA 74767 - 75666 + | dTDP-glucose pyrophosphorylase (glucose-1-phosphate thymidylyltransferase) TERM 99 75675 - 75717 + F 93 -12.4 -3.36327 | gap 1, opp_overlap 75675, overlap 75684 AGCTTAACCCTTAAA TTGGCA-GAAGTGATTTAT AATGAA ATAAATCACTTCTTGCCGA TTATCAATCAGGTAA TERM 100 75717 - 75675 - f 86 -10.2 -3.60971 | gap 1, opp_overlap 75675 75684 AGCTTAACCCTTAAA TTGGCA-GAAGTGATTTAT AATGAA ATAAATCACTTCTTGCCGA TTATCAATCAGGTAA TERM 101 75780 - 75759 - g 73 -6 -4.56914 | TTATTGAAACTAAAA TCAAAGAT TTACTC ATCTTTGA ACCACGGGTATTTGG rmlC 75737 - 76300 + | dTDP-4-keto-6-deoxy-D-glucose-3,5-epimerase TERM 102 76438 - 76494 + G 70 -5.7 -4.34916 | gap 1, opp_overlap 76442 76475 TAATCTATCGGGGAT TAAAGAA-AAAAAATCTTTCATTGAT CAAAAA AGCAATCAAAGATTTTTTCTTCTTTG TATTTTGTTTTTTAT TERM 103 76689 - 76700 + G 93 -4.4 -5.75945 | opp_overlap 76682, overlap 76697 AAAAAATACATTGCA TTGC AGTG GCAA TTTTTTTTAAAAAAT TERM 104 76929 - 76903 - g 73 -8.2 -3.60473 | opp_overlap 76902, overlap 76905 TAGAGAGCAAAGGAA TATCTGATATTT TAA AAATATCAGAGA CCTTATCTAATCTAA TERM 105 76927 - 76905 - g 81 -10.8 -3.3692 | opp_overlap 76902, overlap 76903 GAGAGCAAAGGAATA TCTGATATTT TAA AAATATCAGA GACCTTATCTAATCT ACIAD0081 76314 - 77393 + | glycosyl transferase family protein ACIAD0082 77383 - 78330 + | rhamnosyl transferase TERM 106 78379 - 78393 + G 75 -5.8 -4.72545 | TGATAATATCATTTT TAAGAA TTT TTCTTA TTATTTTATTTTTAT TERM 107 79143 - 79163 + G 81 -4.1 -5.28561 | overlap 79146 CTGTAAGTACTCGTT TTTTTGAAA TGT TTTCAATAA TTTTTATTATATATT TERM 108 79277 - 79293 + G 85 -2.4 -5.9003 | AAGCCTGGAGCGATA TTAAAT CAGAA ATTTAA TTTTTTTCTTAATTT ACIAD0083 78350 - 79315 + | putative polysaccharide polymerase TERM 109 80028 - 80046 + G 70 -7.5 -3.87994 | ACAGGACATGTTTCA GATACTG AGCTA CAGTATC TTTATAAAAATACAT TERM 110 80095 - 80123 + G 75 -6 -4.6821 | CATTATATGAAGGGT TTGGATTGCCTC CACTT GAGGCTATGCAA TTTTCTGTTCCAGTT ACIAD0084 79335 - 80354 + | mannosyl transferase TERM 111 81041 - 81017 - g 79 -10.9 -2.96979 | overlap 81009 AGCACAAGTCATACA TTTACATGAGC AAG GCTCATATAAA AACAAGACGCTACTC ACIAD0085 80367 - 81164 + | glycosyl transferase family protein TERM 112 81194 - 81141 - T 89 -8.6 -4.28774 | gap 1, opp_overlap 81153 81158, overlap 81153 TCACTCAATGGAAAA TGCTTAAAACAACGAAATGGATAAA GTTAT TTTATCCATTTCGTT-TTCGAATCA ACAACGACCATATAA TERM 113 81183 - 81153 - T 100 -14.3 -4.2018 | opp_overlap 81153 81158, overlap 81141 AAATGCTTAAAACAA CGAAATGGATAAA GTTAT TTTATCCATTTCG TTTTCGAATCAACAA TERM 114 81153 - 81183 + T 100 -15 -4.13767 | opp_overlap 81153 81141, overlap 81158 AAATGCTTAAAACAA CGAAATGGATAAAG TTA TTTTATCCATTTCG TTTTCGAATCAACAA TERM 115 81158 - 81178 + T 78 -7.7 -4.20806 | opp_overlap 81153 81141, overlap 81153 CTTAAAACAACGAAA TGGATAAAG TTA TTTTATCCA TTTCGTTTTCGAATC epsM 82610 - 81192 - | bifunctional mannose-6-phosphate isomerase/mannose-1-phosphate guanylyl transferase TERM 116 82447 - 82461 + g 70 -2.8 -5.00884 | CAAATGAGTAGTGGG TCTGCA CAA TCCAGA TTTTTTAAGCGCAAT ACIAD0087 82926 - 84218 + | putative UDP-glucose/GDP-mannose dehydrogenase TERM 117 84280 - 84266 - g 81 -7.2 -4.74132 | ACAGCTTATCAAAAA CAATGT ATC ACATTG CAGGCCGCACCCAAG ACIAD0088 84248 - 85279 + | putative NAD-dependent epimerase/dehydratase (WbpP) ACIAD0089 85279 - 86574 + | MviN family virulence factor TERM 118 87567 - 87551 - g 79 -7.9 -4.33105 | TAATCATGATCAAAA GGCCCTG ACA CAGGCCC TTCAAACTGTGCTGA ACIAD0090 86571 - 87671 + | glycosyl transferase family protein ACIAD0091 87684 - 88775 + | glycosyl transferase family protein TERM 119 89366 - 89383 + G 71 -4 -4.81083 | CCTGTTCAGCCCAAT GGCGTC ATCAAA GTCGCC TTTTTACTGATTGCA ACIAD0092 88784 - 89920 + | glycosyl transferase family protein ACIAD0093 89914 - 90528 + | putative UDP-galactose phosphate transferase (WeeH) ACIAD0094 90509 - 91195 + | putative acetyltransferase (WeeI) per 91199 - 92374 + | perosamine synthetase (WeeJ) TERM 120 92529 - 92542 + G 80 -4.5 -5.1356 | opp_overlap 92527 92529 TTTAACTACAAAACA CCTGT GATG GCAGG TTTTTCTTGGTGGCC TERM 121 93243 - 93233 - g 71 -4 -4.82901 | GCTTCTGGATAAAAA TATC CGA GATA AAGTGGTGCTGGTGA ACIAD0096 92376 - 94265 + | putative dTDP-glucose-4,6-dehydratase/UDP-glucose 4-epimerase (WeeK) (WbpM) TERM 122 95164 - 95179 + G 82 -7.6 -4.564 | AAAATGGACAGGTTA CAATCC AGTG GGATTG TTTTCATTTAAGATT TERM 123 95487 - 95501 + G 77 -5 -4.96523 | overlap 95495 GGGTTGAAGATATCG TCATTG GTT CGATGA TTTTATTATTGATTT ACIAD0098 94679 - 96043 + | putative UDP-glucose lipid carrier transferase/glucose-1-phosphate transferase in colanic acid gene cluster (WcaJ) galU 96123 - 97010 + | UTP-glucose-1-phosphate uridylyltransferase TERM 124 98215 - 98201 - g 76 -2.8 -5.34555 | overlap 98203 CCAGATTATAAAAAA CTTCAA CAA TTGATG GCACACCCGTTTATT ACIAD0100 97037 - 98308 + | putative UDP-glucose 6-dehydrogenase (Ugd) (Udg) pgi 98305 - 99978 + | glucose-6-phosphate isomerase galE 99971 - 100990 + | UDP-glucose 4-epimerase (galactowaldenase) (UDP-galactose 4-epimerase) TERM 125 101181 - 101197 + G 70 -3.7 -4.82855 | opp_overlap 101181 CCTTTGCCAGTGAAA TGCTG AGCTTTG CAGCA TTTTTGAGTTTGCTG ACIAD0103 101027 - 102733 + | hypothetical protein TERM 126 102741 - 102784 + T 100 -12.8 -4.86621 | gap 1, opp_overlap 102752, overlap 102752 CCAAGTAAAAGCGAA TTGAT-AAAAAAGGCGATTCA TGA TGAATCGCCTTTTTACATCGA TTTTTAATTAAGCCT TERM 127 102772 - 102752 - T 100 -14.1 -5.31456 | opp_overlap 102741 102752 CGAATTGATAAAAAA GGCGATTCA TGA TGAATCGCC TTTTTACATCGATTT TERM 128 102752 - 102772 + T 100 -14.1 -4.69027 | opp_overlap 102752, overlap 102741 CGAATTGATAAAAAA GGCGATTCA TGA TGAATCGCC TTTTTACATCGATTT manB 104165 - 102792 - | bifunctional phosphomannomutase/phosphoglucomutase TERM 129 103582 - 103595 + g 77 -3.9 -5.10461 | opp_overlap 103582, overlap 103576 AATTCAACAGGAACA TTCAA TGCC TTGAA TTTTTCTTCAATAGC TERM 130 103744 - 103763 + g 83 -10.8 -3.54408 | overlap 103740 GATTGCGTATTTCCT TTCACCGA TACT TCGGTGAA TTGATTTGACTCAGC ACIAD0105 105207 - 104308 - | LysR family transcriptional regulator TERM 131 104375 - 104394 + g 70 -7.2 -3.82218 | gap 1, overlap 104360 CTGGTCTTGTGATGG CAGCACATG TGC CA-GTGCTG TTTGATGCTATAGGT TERM 132 105670 - 105682 + H 71 -6.3 -4.08767 | opp_overlap 105670 GCGTCTTTATCGAAA TTGGT AAT ACCAA TTTTAACGCGATAAC lldP 105761 - 107416 + | L-lactate permease lldR 107440 - 108192 + | DNA-binding transcriptional repressor LldR lldD 108189 - 109343 + | L-lactate dehydrogenase TERM 133 110313 - 110324 + G 85 -4.4 -5.47159 | opp_overlap 110313 ATTGGGGAAAAATAC GGTA AAGA TACC TTTTTATTTATTGAA TERM 134 110552 - 110540 - g 74 -4.1 -4.94222 | AAGAATTGAGAAAAA CAGTA AAG CACTG ACCGAACAGTTTTTA dld 109347 - 111065 + | D-lactate dehydrogenase ACIAD0110 111193 - 112650 + | putative signal peptide TERM 135 112700 - 112674 - T 100 -13 -4.03888 | opp_overlap 112674 TATTTAGAACAATAA TCGGGTCTCGCC ATT GGTAAGACCCGA TTTTTTTGATTATTT TERM 136 112674 - 112700 + T 100 -13 -5.73672 | opp_overlap 112674 TATTTAGAACAATAA TCGGGTCTCGCC ATT GGTAAGACCCGA TTTTTTTGATTATTT ACIAD0111 112977 - 112714 - | hypothetical protein tyrB 114345 - 113131 - | aromatic amino acid aminotransferase TERM 137 114403 - 114434 + r 80 -11 -2.55668 | overlap 114402 TCGTAGTGAAGTAGG TGAGTTTAAGGTGC TCAA GAGCCTTAAACTCA ATTAATGTAACAGTA TERM 138 114986 - 114969 - R 100 -9.9 -6.02546 | TTAAACCAAAAAAAA CCACACA GGGA TGTGTGG CAAAAATGATCTGTT lrp 115521 - 115051 - | branched chain amino acid ABC transporter TERM 139 115988 - 115978 - g 76 -6.8 -4.44301 | AGCCAAAATAAAGAA CGCA TGA TGCG CGTTGCGGAATATAG dadA 115660 - 116919 + | D-amino acid dehydrogenase small subunit dadX 116951 - 118048 + | alanine racemase 2, PLP-binding, catabolic ACIAD0117 118060 - 118419 + | hypothetical protein TERM 140 118798 - 118816 + G 91 -5.3 -5.65496 | AATTTTATATATTTA CATGATC ATTGG GGTCATG TTTTTCTTTTTAATG cycA 118673 - 120052 + | amino acid APC transporter TERM 141 120067 - 120092 + F 83 -10.5 -3.17901 | opp_overlap 120064 AATGATGCAATATTG GAGAGCATGAT TTAA AGCATGCTCTC TTAACTTAAGAATGT ACIAD0119 120579 - 121100 + | putative major fimbrial subunit protein precursor TERM 142 121117 - 121147 + F 74 -6.1 -4.57569 | GGATTTTTAATGATC CGCCATGTGCTCT GTATA GGATGACATGGCG TTTTTGACAAAATAC ACIAD0120 121215 - 121931 + | putative pili assembly chaperone, required for type 1 fimbriae ACIAD0121 121944 - 124553 + | putative outer membrane usher protein ( fimbrial usher protein) TERM 143 125254 - 125242 - g 77 -6.3 -4.731 | opp_overlap 125252 AACTGAGTAATAAAA CCAAT GGT ATTGG GCCACAGCCTGTAGC ACIAD0122 124554 - 125978 + | putative fimbrial subunit, outer membrane protein ACIAD0123 125975 - 126712 + | putative pili assembly chaperone TERM 144 127032 - 127018 - g 74 -4.3 -4.91511 | opp_overlap 127018 ATTTGAGTATAAAAA TTGCA AGACA TGCAA ATATTTCTTATGCAG TERM 145 127809 - 127799 - g 91 -6.8 -5.48787 | opp_overlap 127798 ACAATATAGAAAAAA CCTG AAG CAGG ATGATTATCTTGATC ACIAD0124 126867 - 127841 + | putative transcriptional regulator ACIAD0125 128885 - 128001 - | hypothetical protein garD 130484 - 128937 - | D-galactarate dehydrogenase TERM 146 130542 - 130514 - R 91 -11.9 -3.8714 | opp_overlap 130521, overlap 130509 AAAAAACTAAGAGAA CCAGAAAGCTT GCGTCCT AAGCTTTCTGG TCAAAATCACTTATA gudP 131836 - 130553 - | major facilitator superfamily D-glucarate/D-galactarate permease gudD 132209 - 133543 + | D-glucarate dehydratase kdgD 134254 - 135165 + | 5-dehydro-4-deoxyglucarate dehydratase ACIAD0131 135198 - 136778 + | 2-ketoglutarate semialdehyde dehydrogenase ACIAD0132 136994 - 137707 + | GntR family transcriptional regulator ACIAD0133 138742 - 137774 - | putative 2-hydroxyacid dehydrogenase TERM 147 138337 - 138327 - G 71 -3.2 -4.96848 | GCTGCTAGATAAAAA GAAC TTT GTCC TGTTCCCCATAGTCC ACIAD0134 138808 - 138975 + | fragment of transposase for insertion sequence TERM 148 139845 - 139832 - g 71 -6.7 -4.09243 | opp_overlap 139831 GAGATGGGCGGAAAA TCTGC AATA GCAGA AATTATGAAACAATA ACIAD0135 139127 - 140170 + | GalR/LacI family transcriptional repressor TERM 149 140399 - 140348 - f 100 -17.9 -2.57132 | gap 2, opp_overlap 140362, overlap 140362 TCTGGTCGGCACAAT TCTTGCTTTTTAAACGTCACCCAAA TCGA TTTGGGTGACGTTTAAAAA-CA-GA GGTGGTGATATGAGC TERM 150 140387 - 140362 - f 100 -16.3 -3.53012 | opp_overlap 140362, overlap 140348 TTCTTGCTTTTTAAA CGTCACCCAAA TCGA TTTGGGTGACG TTTAAAAACAGAGGT TERM 151 140362 - 140387 + F 100 -16.3 -3.53091 | opp_overlap 140348 140362 TTCTTGCTTTTTAAA CGTCACCCAAA TCGA TTTGGGTGACG TTTAAAAACAGAGGT ACIAD0136 140409 - 141734 + | putative xanthine/uracil permease ACIAD0137 141745 - 143175 + | putative cytosine deaminase ACIAD0138 143172 - 143894 + | hypothetical protein ACIAD0139 143959 - 145248 + | hypothetical protein TERM 152 145313 - 145334 + F 85 -8.7 -4.13014 | opp_overlap 145313 AATCAAAAAGAAAAA GCCCCAATC TTTC GATTGAGGC TTTTCAAAATCTGGA TERM 153 145334 - 145313 - f 100 -10.9 -5.67529 | opp_overlap 145313 AATCAAAAAGAAAAA GCCCCAATC TTTC GATTGAGGC TTTTCAAAATCTGGA TERM 154 145379 - 145395 + F 72 -9.5 -2.62616 | overlap 145382 TCGAACTCGCGACCC CAACCTT GGC AAGGTTG TGCTCTACCAACTGA TERM 155 145496 - 145512 + F 72 -9.5 -2.62616 | overlap 145499 TCGAACTCGCGACCC CAACCTT GGC AAGGTTG TGCTCTACCAACTGA ACIAD0141 145622 - 145750 + | hypothetical protein ACIAD0142 145763 - 146071 + | putative activator of morphogenic pathway (BolA), important in general stress response ACIAD0143 146083 - 146475 + | hypothetical protein ACIAD0144 146557 - 147396 + | ParA family ATPase ACIAD0145 147389 - 147796 + | hypothetical protein TERM 156 148547 - 148522 - g 83 -9.1 -4.11484 | opp_overlap 148521 148520 GTCAAGGGCGTAAAA GCAGATCATTT ATAT AAAGGATCTGC ACTGTTACTGGTGAT ACIAD0147 148006 - 148596 + | hypothetical protein ACIAD0148 149279 - 148593 - | putative integral membrane protein (DedA) TERM 157 149332 - 149317 - H 77 -4.8 -5.06735 | opp_overlap 149315 149317 GATAAAGTATAAAAA TTCAAA AAGA TTTGAA TGTGTTATTTTTGGA TERM 158 149677 - 149710 + G 73 -3.9 -5.04222 | overlap 149679 GCTTTACTCTTTGGT TTCCAAGCTCG TTTTGCTGCTTT CGGGCTTGGGA TTTTTAGTTTGCTTA ACIAD0149 149443 - 149865 + | hypothetical protein ACIAD0150 149978 - 150346 + | hypothetical protein TERM 159 150354 - 150370 + F 83 -5.1 -5.55664 | opp_overlap 150349 150354 AACACTAAACTAAAA GGCAC GAATCAA GTGCC TTTTTTTAATGCTGC TERM 160 151744 - 151729 - g 80 -4.8 -5.15969 | GGTGAAGTGAAAAAA GAATAT GCAG ATATTC TTCGCCTTGCCGATG guaA 150400 - 152052 + | bifunctional GMP synthase/glutamine amidotransferase protein TERM 161 152113 - 152101 - T 72 -9.1 -2.58714 | opp_overlap 152099 152099 TTTTACATCAAGCGA GCGCT CTG AGCGC GGTCTGATTTAAGAC TERM 162 152132 - 152161 + T 100 -14.5 -3.56958 | opp_overlap 152132 152139, overlap 152139 CTGATTTAAGACATA TAAAAAAGGGCGC TGAA GCGTCCTTTTTTA TTATCCTGTTGTTGG TERM 163 152161 - 152132 - T 87 -12.3 -3.11072 | opp_overlap 152132 152139, overlap 152139 CTGATTTAAGACATA TAAAAAAGGGCGC TGAA GCGTCCTTTTTTA TTATCCTGTTGTTGG TERM 164 152139 - 152154 + T 93 -8.2 -5.58179 | opp_overlap 152139 152132, overlap 152132 AAGACATATAAAAAA GGGCGC TGAA GCGTCC TTTTTTATTATCCTG TERM 165 152154 - 152139 - T 86 -6 -5.46276 | opp_overlap 152132 152139, overlap 152132 AAGACATATAAAAAA GGGCGC TGAA GCGTCC TTTTTTATTATCCTG ACIAD0152 154642 - 152162 - | hypothetical protein TERM 166 153333 - 153348 + g 74 -4 -5.02074 | opp_overlap 153325, overlap 153335 AATTGAATGCACTCA TTTCTG ATTG CAGAGA TTTTTTCAAGAATAG TERM 167 154783 - 154756 - H 89 -9.4 -4.11484 | opp_overlap 154756 154756 154760 CTTAACTTGCTAAAA GATATACTAAGA TATA TCTTAATATATC TAAATTAAGCAATAT TERM 168 154820 - 154810 - H 74 -5.4 -4.81357 | ATATGAGAAAATAAA GATG AGA CATC GATCCAGTCATCATC ACIAD0154 154811 - 155338 + | putative transcriptional regulator ACIAD0155 155372 - 155689 + | hypothetical protein ACIAD0156 155705 - 155944 + | hypothetical protein ACIAD0157 156095 - 157042 + | pirin-like protein ACIAD0158 157039 - 157437 + | hypothetical protein TERM 169 157466 - 157494 + F 84 -11.9 -2.64735 | opp_overlap 157470, overlap 157470 TAAATGACTTTACAG TTAAGCCCATG CTATTGC CATGGGCTTAA TGCTATAACTGAGAT TERM 170 157470 - 157490 + F 70 -8.3 -3.25223 | opp_overlap 157470, overlap 157466 TGACTTTACAGTTAA GCCCATG CTATTGC CATGGGC TTAATGCTATAACTG ACIAD0159 157503 - 158186 + | glutathione S-transferase ACIAD0160 159055 - 158189 - | AraC family transcriptional regulator TERM 171 158859 - 158874 + g 71 -6.8 -4.15006 | gap 1 GGTGCACCACCATTA CGCCAGC CAT GC-GGCG TTTTACGATAGCTCT ACIAD0161 159232 - 160149 + | hypothetical protein TERM 172 161399 - 161389 - g 75 -3.2 -5.1848 | overlap 161396 161398 AATGAAGTGAAAAAA GATG GAA CACC ACGTACTGGTGGAAG ACIAD0162 160225 - 161481 + | hypothetical protein TERM 173 161533 - 161495 - T 87 -10.7 -3.43308 | gap 1, opp_overlap 161506, overlap 161506 GATACTAAAAAATGA TCATAAAAAAAGGACTCA AATT TGAGTCCTTTTTTT-TAA AATACTTTAGCGTTT TERM 174 161506 - 161523 + T 100 -9.9 -5.78622 | opp_overlap 161506 161495 ATGATCATAAAAAAA GGACTCA AATT TGAGTCC TTTTTTTTAAAATAC TERM 175 161523 - 161506 - T 100 -9.9 -5.67967 | opp_overlap 161506, overlap 161495 ATGATCATAAAAAAA GGACTCA AATT TGAGTCC TTTTTTTTAAAATAC ACIAD0163 162142 - 161540 - | hypothetical protein TERM 176 162224 - 162184 - R 79 -9.3 -3.38316 | gap 1, opp_overlap 162194, overlap 162186 CTACCACTTAACCAA TAGCATAAAAGCCGAAAC AACAAG GTTT-GGCTTTTATGCAA CAGATCTGAATTGTG TERM 177 162222 - 162186 - R 89 -11.9 -3.25919 | gap 1, opp_overlap 162194, overlap 162184 ACCACTTAACCAATA GCATAAAAGCCGAAAC AACAAG GTTT-GGCTTTTATGC AACAGATCTGAATTG argS 164048 - 162258 - | arginyl-tRNA synthetase TERM 178 163833 - 163852 + g 95 -7.9 -5.00884 | AGTGATGTCGGCGAC TTCTGGC AAAGAG GCCAGAA TTTTTTCCGCCAAAT ACIAD0165 164791 - 164201 - | hypothetical protein sfcA 165044 - 166744 + | malate dehydrogenase TERM 179 166763 - 166774 + F 95 -5.8 -6.34424 | opp_overlap 166753 166763 ATAATTTAAAAAAAA GAGC TTCG GCTC TTTTTTTTTTGGAAA TERM 180 166774 - 166763 - f 93 -5.8 -5.87688 | opp_overlap 166763, overlap 166753 ATAATTTAAAAAAAA GAGC TTCG GCTC TTTTTTTTTTGGAAA TERM 181 166805 - 166824 + F 73 -3.6 -5.1361 | AAAGATAACAAAGCC TATAGACG GGAC TGTCTGTA TTTTTTAAAATTTGT TERM 182 167989 - 167964 - g 74 -7.6 -3.9534 | AGGGACATCCAGAAA TCGATCAGCA CGACCT TGCGGATCGA CAATTTCTGATTTAT ACIAD0167 166880 - 170200 + | putative VGR-like protein TERM 183 171766 - 171749 - g 73 -7.1 -4.10453 | TAAATGGCGTTAAAA TGTTTAC TCTA GTAAACA GCTTGAAAGTTCCTA ACIAD0168 170197 - 172380 + | hypothetical protein TERM 184 172539 - 172529 - g 86 -2.6 -5.85244 | AAGGAAAATAAAAAA TTAA TTA TTAA ACTTGATAATGAAAA ACIAD0169 172382 - 173107 + | hypothetical protein TERM 185 173166 - 173145 - f 90 -11.7 -3.54676 | opp_overlap 173145, overlap 173141 AGTGATTGAAATCAA TCCGAACTT AAAA AAGTTCGGA TTTTTTACAAATATA TERM 186 173145 - 173166 + F 100 -11.7 -5.04385 | opp_overlap 173145 173141 AGTGATTGAAATCAA TCCGAACTT AAAA AAGTTCGGA TTTTTTACAAATATA ACIAD0171 173337 - 173546 + | hypothetical protein TERM 187 173599 - 173573 - T 80 -10.3 -2.9914 | opp_overlap 173569 173573, overlap 173580 TATTTCTTACATACA GGAGAAATTGA AACCA TCAACTTCTCC TTAATTTTTCTAACC TERM 188 173573 - 173599 + T 75 -8.1 -3.88001 | opp_overlap 173573 173580, overlap 173569 TATTTCTTACATACA GGAGAAATTGA AACCA TCAACTTCTCC TTAATTTTTCTAACC ACIAD0172 174532 - 173609 - | putative dyp-type peroxidase rhtB 174698 - 175324 + | homoserine/homoserine lactone efflux protein znuB 176142 - 175327 - | high affinity Zn ABC transporter membrane protein znuC 176924 - 176145 - | high affinity Zn ABC transporter ATP-binding protein zur 177403 - 176915 - | Zn transport system transcriptional repressor znuA 177514 - 178368 + | high affinity Zn ABC transporter periplasmic substrate-binding protein TERM 189 178647 - 178681 + G 76 -7.8 -4.10953 | opp_overlap 178647 178649 GCATGGGGAATAAAA GATTCTACTGCCGCAC TCA GTGCTGCACTAGGAGC TTTAGTTTGCTGGAT TERM 190 178681 - 178647 - g 75 -5.6 -4.64676 | opp_overlap 178647, overlap 178649 GCATGGGGAATAAAA GATTCTACTGCCGCAC TCA GTGCTGCACTAGGAGC TTTAGTTTGCTGGAT atpI 178542 - 178940 + | ATP synthase protein I atpB 179044 - 179919 + | F0F1 ATP synthase subunit A TERM 191 179925 - 179957 + F 84 -5.6 -5.41359 | overlap 179927 AAAGCATTAATGGTT TTTGCCTGACTATC AAAGG GATGGTTGGGCACA TTTTTTAGTTTAATT atpE 180004 - 180249 + | membrane-bound ATP synthase, F0 sector, subunit c atpF 180289 - 180759 + | F0F1 ATP synthase subunit B TERM 192 180990 - 181008 + G 75 -8.2 -3.75738 | opp_overlap 180987 180990 GATCAGTCACAAGCA GTGTCAAA CTT TTTGACGC TTCTTGCTGATAATG TERM 193 181206 - 181222 + G 70 -8 -3.58505 | opp_overlap 181205, overlap 181204 181202 TCAGTAGAAGTCAAG CCTGCA TTGAT TGCAGG TGTTGTTATTCGTGC atpH 180771 - 181307 + | F0F1 ATP synthase subunit delta atpA 181338 - 182897 + | F0F1 ATP synthase subunit alpha TERM 194 183392 - 183408 + G 93 -12.3 -3.04322 | opp_overlap 183387 GGTGCAACGACCCAG CTTGGCG ATG CGCCAAG TCTTGAACAGTTGAC atpG 182975 - 183844 + | F0F1 ATP synthase subunit gamma TERM 195 184626 - 184582 - g 86 -8 -4.60746 | gap 1 TCAAAAAGACGAAAA CGGTAAAGGTCGT-GACGTAT TATT ATTCGTCGACAACATCTACCG TTACACACTTGCAGG TERM 196 184771 - 184749 - g 75 -10.6 -2.84051 | overlap 184748 TTACGTCGACTAAAT CTGGTTCGAT CAC ATCGATCCAG GCAGTATACGTACCT atpD 183875 - 185269 + | F0F1 ATP synthase subunit beta atpC 185297 - 185716 + | F0F1 ATP synthase subunit epsilon TERM 197 185754 - 185739 - f 100 -10.4 -4.74706 | opp_overlap 185739 TTTAAGATTGAAAAA GCCACC GTCA GGTGGC TTTTTTTTGTATAAA TERM 198 185739 - 185754 + F 100 -10.4 -6.02914 | opp_overlap 185739 TTTAAGATTGAAAAA GCCACC GTCA GGTGGC TTTTTTTTGTATAAA ACIAD0189 185860 - 186339 + | hypothetical protein TERM 199 186411 - 186394 - f 83 -9.9 -3.81516 | opp_overlap 186394 TAAAATGATTAACAA GCCATTC TTTT GAATGGC TTTTTTATGCTATAA TERM 200 186394 - 186411 + F 100 -9.9 -5.34555 | opp_overlap 186394 TAAAATGATTAACAA GCCATTC TTTT GAATGGC TTTTTTATGCTATAA ACIAD0190 186460 - 186768 + | hypothetical protein TERM 201 187164 - 187149 - g 70 -7.6 -3.61983 | opp_overlap 187149 TGAATTGACAGACAA TGCTCT CACC AGAGCA TATTGGGATGTCGCT ACIAD0191 186781 - 187665 + | hypothetical protein ACIAD0192 188271 - 187684 - | hypothetical protein TERM 202 188456 - 188421 - R 95 -15 -2.97747 | opp_overlap 188417 188426, overlap 188426 GCTGTAGACCAGACA TAAAACATGTGCATGA TAGA TCATGCACATGTTTAA AATATCTTATTTGGC TERM 203 188426 - 188451 + r 100 -14.9 -3.67285 | opp_overlap 188426 188421, overlap 188417 AGACCAGACATAAAA CATGTGCATGA TAGA TCATGCACATG TTTAAAATATCTTAT TERM 204 188451 - 188426 - R 100 -14.9 -4.63586 | opp_overlap 188417 188426, overlap 188421 AGACCAGACATAAAA CATGTGCATGA TAGA TCATGCACATG TTTAAAATATCTTAT ACIAD0193 189008 - 188463 - | glutathione peroxidase ACIAD0194 189923 - 189144 - | AraC family transcriptional regulator ACIAD0195 191147 - 189942 - | MFS family transporter TERM 205 191914 - 191940 + G 73 -5.8 -4.57482 | overlap 191920 GCAATTGACCAAGGT GGTTGAGCATGC AAT GCGTGCTTGGTC TTTATTTGTAGATAC TERM 206 191920 - 191934 + G 70 -7.8 -3.58566 | overlap 191914 GACCAAGGTGGTTGA GCATGC AAT GCGTGC TTGGTCTTTATTTGT ACIAD0196 191273 - 191977 + | TetR/AcrR family transcriptional regulator TERM 207 192361 - 192375 + G 82 -8.6 -4.33803 | opp_overlap 192360 192357 ACCGCAACCAATATG GGCATT GTG AATGCC TTTATTCCTGTATTT ACIAD0197 192055 - 192966 + | hypothetical protein TERM 208 193453 - 193439 - g 71 -2.1 -5.11033 | overlap 193430 TACAAGCTGAAAAAA GCTTC TTAGC AAAGC TTTTTTCTAAGATTA ACIAD0198 193384 - 194565 + | putative surface lipoprotein ACIAD0199 194599 - 195249 + | nitrite reductase/ring-hydroxylating dioxygenase ferredoxin subunit ACIAD0200 195242 - 196132 + | putative ferredoxin subunit of nitrite reductase and ring-hydroxylating dioxygenase TERM 209 196596 - 196573 - g 74 -4.5 -4.84359 | overlap 196574 GTACTTGGACAAAAA TGGCTGCTC AACACA GAACAGCCG ACACTTGCAGACCTA ACIAD0201 196129 - 196749 + | putative glutathione S-transferase-like protein (Gst13 glutathione S-transferase) ACIAD0202 196911 - 197858 + | LysR family transcriptional regulator TERM 210 197877 - 197916 + F 84 -5.7 -5.44638 | overlap 197878 ATCTGCCTTATTCAC ACTCGTCTGCTTCCGAT ACGATA ATTGGGATCAGACGGGC TTTTATTTTTATTCT TERM 211 197878 - 197915 + F 81 -9.2 -3.83123 | overlap 197877 TCTGCCTTATTCACA CTCGTCTGCTTCCGAT ACGATA ATTGGGATCAGACGGG CTTTTATTTTTATTC ACIAD0203 198110 - 199393 + | hypothetical protein ACIAD0204 199469 - 200023 + | putative cytidine and deoxycytidylate deaminase zinc-binding protein ACIAD0205 200065 - 201624 + | sugar ABC transporter ATP-binding protein TERM 212 202674 - 202686 + G 72 -7.7 -3.86897 | overlap 202672 GCTGTTCTTTTTGTT GGCAT CCG ATGCC TTTATAGAAAATCGA ACIAD0206 201649 - 202770 + | ABC transporter membrane protein TERM 213 202984 - 203011 + G 74 -4.2 -4.98616 | gap 1, overlap 202960 202985 202989 GGGCTCTTGGCAGGC GCAGTTGCAGGTA TGT TATCTGC-ACTGA TTTTTGCTGTTTTAG TERM 214 202985 - 203010 + G 70 -7.7 -3.57543 | gap 1, overlap 202960 202984 202989 GGCTCTTGGCAGGCG CAGTTGCAGGTA TGT TATCTGC-ACTG ATTTTTGCTGTTTTA ACIAD0207 202783 - 203700 + | ABC transporter membrane protein TERM 215 203742 - 203726 - T 72 -8 -3.52234 | opp_overlap 203726, overlap 203719 TTAAGAAAGGCATAA GGCTAC GTCGA GTAGCC TTTTTCATAGAAATA TERM 216 203726 - 203742 + T 86 -8 -4.72986 | opp_overlap 203726 203719 TTAAGAAAGGCATAA GGCTAC GTCGA GTAGCC TTTTTCATAGAAATA TERM 217 204085 - 204107 + T 83 -6.3 -4.9218 | overlap 204086 GATTCACAAACCCTC TGGATGTGA TTGAT TCACATCCC TTTTTATGCTCAGTC TERM 218 204086 - 204106 + T 82 -9.8 -3.54585 | overlap 204085 ATTCACAAACCCTCT GGATGTGA TTGAT TCACATCC CTTTTTATGCTCAGT TERM 219 204115 - 204140 + T 100 -12 -6.17268 | CACATCCCTTTTTAT GCTCAGTCAT TCTCAT ATGACTGAGC TTTTTTTTATTCTGA ACIAD0208 204814 - 204236 - | putative Sua5/YciO/YrdC/YwlC family protein ACIAD0209 205999 - 204848 - | putative Rossmann-fold nucleotide-binding protein involved in DNA uptake (Smf) TERM 220 205972 - 205950 - G 86 -12.1 -3.0782 | opp_overlap 205949 205947, overlap 205952 GAATGCTGTAATACA TACCACACC TTGAT GGTGTGGTA GTGATGTGATGAAAG TERM 221 205970 - 205952 - G 77 -10.3 -3.09452 | opp_overlap 205949 205947, overlap 205950 ATGCTGTAATACATA CCACACC TTGAT GGTGTGG TAGTGATGTGATGAA ACIAD0210 207180 - 206017 - | hypothetical protein TERM 222 206886 - 206896 + g 81 -5.4 -5.18561 | opp_overlap 206873 206886, overlap 206874 206873 GATCACCTGGATAAA TCCA GTG TGGA TTTTTTACATGTTTA TERM 223 207196 - 207232 + H 84 -4 -5.67063 | opp_overlap 207196, overlap 207178 AATTCCTGAAAATTA TGTCTGTAGTTG-CGTTA TAA TAACGACAA-TACACACA TTTTTTTATACTGAG def 207295 - 207819 + | peptide deformylase 1 (N-formylmethionylaminoacyl-tRNA deformylase, binds Zn(II)) TERM 224 207845 - 207862 + F 100 -9.9 -4.3767 | opp_overlap 207843 207845 CCTATCGCATGAACA GCCCAAT TTTG ATTGGGC TTTGTTATACTATAA TERM 225 207862 - 207845 - f 77 -9.9 -3.14602 | opp_overlap 207845, overlap 207843 CCTATCGCATGAACA GCCCAAT TTTG ATTGGGC TTTGTTATACTATAA TERM 226 207935 - 207958 + G 74 -4.6 -4.82901 | gap 1, overlap 207922 207955 TGCTGCTGGGATTTA CCGCAGTGTTG TTA CAG-ATTGCGG TTTTTCTACAACCGC ACIAD0212 207853 - 208335 + | hypothetical protein TERM 227 209316 - 209287 - g 77 -3.5 -5.15634 | overlap 209288 GATGTCATCAAAAAA GTTGAAGCTCAAG TGGA CTATAGCTACAAC GATCACATCATGGAT ACIAD0214 208438 - 210426 + | putative outer membrane copper receptor (OprC) ACIAD0215 210474 - 210797 + | hypothetical protein TERM 228 210807 - 210836 + T 79 -8.7 -3.73914 | gap 1, opp_overlap 210807, overlap 210810 210813 CATTAATATCTAACA GATTTGGAGGGAGT CAA ACTCCCTCTG-ATC TTATTGATGCATACT TERM 229 210810 - 210834 + T 89 -11.5 -3.44998 | opp_overlap 210807, overlap 210807 210813 TAATATCTAACAGAT TTGGAGGGAGT CAA ACTCCCTCTGA TCTTATTGATGCATA TERM 230 210813 - 210831 + T 87 -13.2 -2.87003 | opp_overlap 210807, overlap 210810 210807 TATCTAACAGATTTG GAGGGAGT CAA ACTCCCTC TGATCTTATTGATGC ACIAD0216 212042 - 210837 - | hypothetical protein ACIAD0217 212128 - 212721 + | putative transcription regulator protein TERM 231 212888 - 212873 - f 81 -6.2 -4.99035 | opp_overlap 212872 TGATGCAGATAAAAA CTTGTT GAGA AACAAG GATTTGGCTAGATTG TERM 232 214716 - 214697 - f 72 -9.2 -2.65808 | opp_overlap 214703, overlap 214694 AGTCGTAACAAGGTA GCCGTAGG GGAA CCTGCGGC TGGATCACCTCCTTA TERM 233 214835 - 214819 - f 81 -10.9 -2.62396 | overlap 214821 214832 CAGTTGGTTAGAGCA CACGCTT GAT AAGCGTG GGGTCACAAGTTCAA TERM 234 215012 - 215066 + F 85 -9.1 -3.91072 | gap 1, opp_overlap 215017 215031 215034, overlap 215031 215034 215061 CGGCTAAGGTGTAGA TTATAGAACTTAGTAAAAAGAAGATC ATGA GATCTTGTTTT-ATTAAGTTCTGTGA TTTATCACAGTTTAG TERM 235 215061 - 215076 + F 73 -7.6 -3.8766 | overlap 215012 TTGTTTTATTAAGTT CTGTGA TTTA TCACAG TTTAGTGTGATCTGA TERM 236 215811 - 215799 - f 89 -9.1 -4.2354 | GAAAGGCGAAAAGAA CCCCT GTG AGGGG AGTGAAATAGATCCT TERM 237 216603 - 216589 - f 80 -7.1 -4.56607 | overlap 216581 TGAGTAACGACAAAA CGGGT GAAAA ACCCG TTCGCCGAAAGACCA TERM 238 218536 - 218560 + F 100 -14.2 -5.60993 | opp_overlap 218536 CTTTTAAATACTAAA GCCCCCAGGC CAAAC GCCAGGGGGC TTTTTTTATGCAGAA TERM 239 218560 - 218536 - f 100 -14.2 -4.00532 | opp_overlap 218536 CTTTTAAATACTAAA GCCCCCAGGC CAAAC GCCAGGGGGC TTTTTTTATGCAGAA ACIAD0219 218687 - 219331 + | hypothetical protein TERM 240 219475 - 219463 - f 77 -4.9 -5.11033 | opp_overlap 219463 TATAATCCTAAAAAA TGAAT GAA ATTCA TGTTAAAATGATCGG TERM 241 219489 - 219511 + F 74 -6.2 -4.63592 | CATGTTAAAATGATC GGCTTTCATC TTT GATGTCAGCC TTCTTTTTATTCAGC ACIAD0220 219537 - 221939 + | hypothetical protein TERM 242 221971 - 221953 - f 81 -5.9 -4.95806 | opp_overlap 221953 AAATGATGATAAAAA CGCTCCA GATCT TGGGGCG TTTTTTGTTTTTAAT TERM 243 221953 - 221971 + F 100 -8.8 -5.95286 | opp_overlap 221953 AAATGATGATAAAAA CGCTCCAG ATC TTGGGGCG TTTTTTGTTTTTAAT TERM 244 222352 - 222363 + G 73 -5.8 -4.52502 | opp_overlap 222352 TGGTTATTAATGATA GGCA TATT TGCC TTATTTGTTTTTGCG ACIAD0221 222331 - 222849 + | hypothetical protein ACIAD0222 223203 - 222850 - | hypothetical protein shiA 224541 - 223204 - | shikimate transporter TERM 245 223845 - 223857 + g 78 -4.1 -5.18357 | ATAAAGGAATTTTAA CAGGT GCG ATCTG TTTTTTAATCACTTC ACIAD0224 224676 - 224542 - | hypothetical protein dinP 225817 - 224762 - | DNA polymerase IV, devoid of proofreading, damage-inducible protein P TERM 246 225308 - 225325 + g 70 -7.7 -3.72576 | opp_overlap 225308 TAGATTTTGTATAAA CTGCATC ACCT GATGCGG TTTAATCACACAAAG ACIAD0226 226608 - 225814 - | putative lysozyme ACIAD0228 228047 - 226650 - | MFS family transporter TERM 247 227436 - 227450 + g 76 -2.8 -5.29846 | AAAACCACTTAAATC GAAGGA CTT TACTTC TTTTTGTTTGACATT ACIAD0229 228794 - 228177 - | hypothetical protein TERM 248 228664 - 228677 + g 70 -3.8 -4.88067 | TCGGCAATACCTTGT GCCA GTTCAA TGGC TTTTTCTCGATAAAT ACIAD0230 229124 - 230719 + | hypothetical protein TERM 249 230736 - 230766 + F 95 -12.7 -3.56092 | opp_overlap 230739 230743, overlap 230739 230743 TTTTAGAAAGTGAAT GAAGAAATAGCCC ATTTG GGGCTATTTCTGC TTTAAGAGATGATGA TERM 250 230739 - 230763 + F 87 -13 -2.91144 | opp_overlap 230739 230743, overlap 230736 230743 TAGAAAGTGAATGAA GAAATAGCCC ATTTG GGGCTATTTC TGCTTTAAGAGATGA TERM 251 230763 - 230739 - f 93 -13 -3.44289 | opp_overlap 230739 230736 230743, overlap 230743 TAGAAAGTGAATGAA GAAATAGCCC ATTTG GGGCTATTTC TGCTTTAAGAGATGA TERM 252 230759 - 230743 - f 83 -8 -4.34223 | opp_overlap 230739 230736 230743, overlap 230739 AAGTGAATGAAGAAA TAGCCC ATTTG GGGCTA TTTCTGCTTTAAGAG TERM 253 230743 - 230759 + F 81 -8 -4.13654 | opp_overlap 230743 230739, overlap 230739 230736 AAGTGAATGAAGAAA TAGCCC ATTTG GGGCTA TTTCTGCTTTAAGAG ACIAD0231 230775 - 231251 + | hypothetical protein ACIAD0232 231300 - 231944 + | hypothetical protein TERM 254 232687 - 232697 + G 82 -6.8 -4.86621 | TTCCACATTTTGGTT GGCA TAT TGCC TTTTTGATTGGCGGT TERM 255 232987 - 232999 + G 72 -7.7 -3.78775 | ATTACGGAATCTTCA CTTGG TTG CCAAG TTTGCTGGTCAAGCA ACIAD0233 232176 - 233495 + | MFS family transporter parC 233653 - 235869 + | DNA topoisomerase IV subunit A fadD 236016 - 237695 + | acyl-CoA synthetase (long-chain-fatty-acid--CoA ligase) TERM 256 237704 - 237740 + T 100 -16.9 -3.82478 | opp_overlap 237714, overlap 237714 CAATTAATTCATCTA TATCAAAAAACGCCTGA AAG TCAGGCGTTTTTTTATA TTCTGATTTTTTAAT TERM 257 237714 - 237730 + T 100 -12.3 -5.84432 | opp_overlap 237714, overlap 237704 ATCTATATCAAAAAA CGCCTGA AAG TCAGGCG TTTTTTTATATTCTG TERM 258 237730 - 237714 - T 100 -12.3 -5.22312 | opp_overlap 237714 237704 ATCTATATCAAAAAA CGCCTGA AAG TCAGGCG TTTTTTTATATTCTG ACIAD0236 238161 - 237751 - | hypothetical protein ACIAD0237 238242 - 238640 + | hypothetical protein ppa 238767 - 239294 + | inorganic pyrophosphatase TERM 259 239305 - 239330 + T 88 -7.7 -4.84527 | opp_overlap 239305 AATAAGATAAAAAAA TCAAATACCAG TTTG CTGATATTTGA TTTTTGATATCTAAA TERM 260 239330 - 239305 - T 100 -9.9 -5.86465 | opp_overlap 239305 AATAAGATAAAAAAA TCAAATACCAG TTTG CTGATATTTGA TTTTTGATATCTAAA TERM 261 239374 - 239347 - T 93 -9.8 -4.2349 | opp_overlap 239348, overlap 239348 TTTTGATATCTAAAA GGCCCTAGCGAG CGAA CTGGCTAGGGCT TTTTTATGACTTAAA TERM 262 239373 - 239348 - T 88 -13.3 -3.13773 | opp_overlap 239348, overlap 239347 TTTGATATCTAAAAG GCCCTAGCGAG CGAA CTGGCTAGGGC TTTTTTATGACTTAA TERM 263 239348 - 239373 + T 100 -13.3 -5.31456 | opp_overlap 239347 239348 TTTGATATCTAAAAG GCCCTAGCGAG CGAA CTGGCTAGGGC TTTTTTATGACTTAA ACIAD0240 240686 - 239385 - | putative outer membrane protein TERM 264 239626 - 239610 - G 70 -5.1 -4.42806 | CCAGCCGTAAACAAA TGCAGTG GTC CACTTCA AGCCCGGTACGTTAT TERM 265 240769 - 240749 - H 70 -4.1 -4.70046 | overlap 240765 TAGAAAATGACAAAA TTGTATAGA TAA TCTATAAAA AAGACACATTTTTTA TERM 266 241193 - 241173 - H 75 -7.1 -4.1891 | TGTTTTTAATATAAA TATTTTTAA AAA TTAAAAATA AGATTAAATAAAAAT ACIAD0241 241309 - 242133 + | hypothetical protein TERM 267 242192 - 242172 - T 100 -12.7 -4.14739 | opp_overlap 242172 TGATTGATTTGAAAA GACCGTTTT ATT AAAACGGTC TTTTTTATTTTAGCT TERM 268 242172 - 242192 + T 100 -12.7 -5.80951 | opp_overlap 242172 TGATTGATTTGAAAA GACCGTTTT ATT AAAACGGTC TTTTTTATTTTAGCT ACIAD0242 243689 - 242202 - | magnesium chelatase, competence related protein (ComM) TERM 269 243247 - 243264 + g 93 -9.9 -4.26903 | opp_overlap 243246 243245 243242 243241 GAAAAATCAGGAAGC TGGCCAA TCTC TTGGCCA TTTTCATCAGGTGCA TERM 270 243415 - 243395 - G 71 -9.8 -2.58663 | overlap 243394 ATTGATCTGTACAAC CTTCAGGT AACTG ACCTGAAG CAATTAAAATACCCA ACIAD0243 244052 - 243759 - | hypothetical protein glnK 244264 - 244602 + | regulatory protein, P-II 2, for nitrogen assimilation by glutamine synthetase, regulates GlnL (NRII) and GlnE (ATase) TERM 271 244790 - 244767 - g 79 -8.2 -4.2416 | overlap 244764 CAACTGAAGAAACAA CAACCGTTGT AGCT ACAACGACTG AAGCACCTGTAACTG amtB 244664 - 246064 + | ammonium transporter TERM 272 246099 - 246085 - f 88 -7.1 -5.0133 | opp_overlap 246074 246085 GAGTTCTTTAAAAAA CAGCC GATCA GGCTG TTTTTTTATGGCGTT TERM 273 246085 - 246099 + F 93 -7.1 -5.63504 | opp_overlap 246085, overlap 246074 GAGTTCTTTAAAAAA CAGCC GATCA GGCTG TTTTTTTATGGCGTT ACIAD0246 246187 - 246666 + | transcriptional regulator NrdR ribD 246659 - 247747 + | bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase TERM 274 247788 - 247774 - g 83 -9.2 -3.96148 | overlap 247775 TCGGTTTATCATAAA CGCCGC CAT GCGGCA CGAACGACAGATGAA TERM 275 247787 - 247775 - g 76 -10.5 -2.97475 | overlap 247774 CGGTTTATCATAAAC GCCGC CAT GCGGC ACGAACGACAGATGA TERM 276 248169 - 248186 + G 70 -2.7 -5.04249 | gap 1, overlap 248170 CAATGACGATATTTA TGATC-CG AGT CGAGATCG TTTGTTTTTTAAGCG TERM 277 248961 - 248971 + G 71 -6.8 -4.22407 | overlap 248939 GCCATTACGTCAGTT GCTG GGT CAGC TTTATCATTTTGCTG ACIAD0248 247744 - 249039 + | putative DNA modification methylase (adenine-specific methyltransferase) ribC 249084 - 249743 + | riboflavin synthase subunit alpha TERM 278 249755 - 249773 + T 100 -11.8 -5.4492 | opp_overlap 249755 ATAATAGTGTAAAAA GCTCATCT AAA AGATGAGC TTTTTTCTATGTATG TERM 279 249773 - 249755 - T 100 -11.8 -4.67556 | opp_overlap 249755 ATAATAGTGTAAAAA GCTCATCT AAA AGATGAGC TTTTTTCTATGTATG ACIAD0250 250009 - 249791 - | hypothetical protein ACIAD0251 250764 - 250132 - | hypothetical protein TERM 280 250485 - 250497 + g 74 -4.8 -4.91109 | CCGCAATCTGTTGGG CGTG CTGTT CACG TTTTTGTGATAGAGA holC 251207 - 250800 - | DNA polymerase III, chi subunit pepA 252648 - 251200 - | aminopeptidase A TERM 281 251267 - 251244 - G 70 -5.2 -4.48175 | opp_overlap 251244, overlap 251238 AAAACTGAACTAAAA GTGGTACAGG ACGA CCTGTTGCAC CTTTTGCTGTTCCTG ACIAD0254 252803 - 253903 + | hypothetical protein TERM 282 254043 - 254055 + G 75 -3.3 -5.186 | opp_overlap 254033, overlap 254044 TAAAGCAGACTATAG CGCCT GGC AGGCA TTTTTATATGTTTTA ACIAD0255 253903 - 254973 + | hypothetical protein TERM 283 255012 - 254993 - f 76 -3.6 -5.38047 | overlap 254995 GAGCTATAGAAAAAA CACATGAT CAAG ATCATGCA AAGTCATCATACAGA TERM 284 255010 - 254995 - f 72 -6.2 -4.31943 | overlap 254993 GCTATAGAAAAAACA CATGAT CAAG ATCATG CAAAGTCATCATACA gpmI 255095 - 256642 + | phosphoglyceromutase ACIAD0257 256653 - 257834 + | putative periplasmic carboxyl-terminal protease pilR 259251 - 257836 - | type 4 fimbriae expression regulatory protein TERM 285 258967 - 258946 - G 72 -8.1 -3.85698 | GGGTTTGCTCACAAA GTCAAAAGC ACCG GCTTTTAAC GCTGCAATTGCAATG pilS 260849 - 259269 - | sensor protein TERM 286 259778 - 259796 + g 72 -6.1 -4.25053 | TACGTTTGGTCTGTT TTGCAAT CATAT ATTGCAA TTGTTTCTGTTGTGC gacA 261503 - 260868 - | response regulator pbpG 261717 - 262775 + | D-alanyl-D-alanine endopeptidase, penicillin-binding protein 7 and penicillin-binding protein 8 TERM 287 262827 - 262844 + T 100 -9.9 -5.52384 | opp_overlap 262827 CTAGATATAAAAAAA CCAGTTG CAAG CAACTGG TTTTTTTAATGGGAA TERM 288 262844 - 262827 - T 100 -9.9 -5.76633 | opp_overlap 262827 CTAGATATAAAAAAA CCAGTTG CAAG CAACTGG TTTTTTTAATGGGAA thrC 264008 - 262869 - | threonine synthase hom 265382 - 264069 - | homoserine dehydrogenase dsbC 266358 - 265546 - | thiol:disulfide interchange protein xerD 267405 - 266488 - | site-specific tyrosine recombinase ACIAD0267 267558 - 267821 + | putative ferrous iron transport protein A (FeoA) TERM 289 268009 - 267974 - g 82 -7.7 -4.42806 | gap 1, overlap 268002 TTACCTTCAAATAAA GCTGTACGTGTACTGG ATTTA CCAGGA-ACATACAGC CTGAATGCGACAAGC ACIAD0268 267818 - 269671 + | putative ferrous iron transport protein B (FeoB) ACIAD0269 269688 - 269939 + | hypothetical protein TERM 290 269994 - 269959 - f 86 -12.8 -2.58686 | gap 1, opp_overlap 269968, overlap 269968 ATCTGATATAAAATT GC-TTAAAAAGCCGTCA AAT TGACGGCTTTTTTACGC GCTGACACAAAAAAC TERM 291 269968 - 269984 + F 100 -12.3 -5.02074 | opp_overlap 269959 269968 AAAATTGCTTAAAAA GCCGTCA AAT TGACGGC TTTTTTACGCGCTGA TERM 292 269984 - 269968 - f 100 -12.3 -4.61527 | opp_overlap 269968, overlap 269959 AAAATTGCTTAAAAA GCCGTCA AAT TGACGGC TTTTTTACGCGCTGA murD 270077 - 271444 + | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase ftsW 271466 - 272665 + | cell division protein, stabililzes FtsZ ring ACIAD0272 273638 - 272760 - | putative glutamyl t-RNA synthetase TERM 293 273613 - 273582 - G 91 -12.2 -3.41708 | overlap 273577 TGAACCAAAATGCAA GGGGCCGGTTGGCG ATGG CGCAAACCGACCCA CATAAGCAGTATGAC dksA 274182 - 273643 - | DnaK suppressor protein icc 275194 - 274385 - | cyclic 3',5'-adenosine monophosphate phosphodiesterase (regulator of lacZ) aspP 275817 - 275197 - | adenosine diphosphate sugar pyrophosphatase (ADP-ribose pyrophosphatase) TERM 294 275857 - 275830 - R 100 -14.4 -4.89729 | opp_overlap 275826 275838 CATAAAATTTAAAAA GGATGAAATACA TGTC TGTATTTCATCC TAACTGAGTTCAAAT thiC 277794 - 275899 - | thiamine biosynthesis protein ThiC TERM 295 276974 - 276994 + g 71 -4.7 -4.70659 | opp_overlap 276976, overlap 276976 GAGTTGCGGATAATC CATTCACGG GTT TCGTGAATA TTTTTACCTGTGGAA TERM 296 276976 - 276992 + g 72 -7.3 -3.96999 | opp_overlap 276976, overlap 276974 GTTGCGGATAATCCA TTCACGG GTT TCGTGAA TATTTTTACCTGTGG TERM 297 278076 - 278099 + H 77 -3.2 -5.5353 | overlap 278077 AATGTAAATCTATAA TCATGTGAAT TGTA ATTTGCATGG TTTTTTCTTAGTCTA TERM 298 278588 - 278564 - g 89 -6.5 -5.36364 | TTAAAAATACAAAAA CAGCAACAT ATTCTTG ATGTCGCTG AGGCGTATTTTAATG TERM 299 279458 - 279431 - g 79 -8.5 -4.11484 | overlap 279437 GTCAACGTTTTAAAA CTAAAAGCCGC GGTAGG GCAGCTTTCAG AGCAAGATCTGGCTG tolC 278147 - 279514 + | channel-tunnel spanning the outer membrane and periplasm segregation of daughter chromosomes phoU 279605 - 280330 + | transcriptional repressor for high affinity phosphate uptake TERM 300 280382 - 280360 - T 93 -7.8 -5.53991 | opp_overlap 280360 CATTGATTAAAAAAA GACCTTGA ATTTGCA TCAAGGTC TTTTTTATTACACTT TERM 301 280360 - 280382 + T 93 -7.8 -5.4756 | opp_overlap 280360 CATTGATTAAAAAAA GACCTTGA ATTTGCA TCAAGGTC TTTTTTATTACACTT TERM 302 280602 - 280574 - T 100 -10.5 -5.68039 | overlap 280566 AAACGCACAAAAAAA TCCCAGATTTT TTGGGGG AAAATCTGGGA TGAAAAACAACATCA TERM 303 280931 - 280904 - T 75 -10 -2.62656 | overlap 280903 AAATTGATTTAGAAG TCTTGAGGCCAT TTGA ATAACCTCAAGA TAAAATGATTCAATA TERM 304 280955 - 280937 - T 74 -5.4 -4.6821 | AACCTCAAGATAAAA TGATTCAA TAT TTAAATCA AAGCATACTTTTGAG ACIAD0282 281269 - 280997 - | hypothetical protein argH 282712 - 281279 - | argininosuccinate lyase TERM 305 281798 - 281813 + gH 75 -3.2 -5.18726 | TTTACCACGAATTAA CTCAGG CACA TCTGGG TTTTTCTTCTGAGGC TERM 306 282654 - 282623 - GH 83 -8 -4.27474 | gap 1, opp_overlap 282653, overlap 282624 282627 AAATTCAGCAACAAA GGCATCGGTCGCTTC AGT AAAGCGACCGCC-CC ACATACCAGAGGTCT TERM 307 282654 - 282624 - GH 70 -8.2 -3.154 | opp_overlap 282653, overlap 282623 282627 AATTCAGCAACAAAG GCATCGGTCGCTTC AGT AAAGCGACCGCCCC ACATACCAGAGGTCT TERM 308 282651 - 282627 - GH 81 -10.7 -2.77283 | overlap 282623 282624 TCAGCAACAAAGGCA TCGGTCGCTTC AGT AAAGCGACCGC CCCACATACCAGAGG TERM 309 282966 - 282976 + GH 78 -4 -5.18355 | ATACATCTTATTTAT TAAC TGG GTTA TTTTTGCTTTTTCAG algZ 282703 - 283854 + | alginate biosynthesis protein algR 283912 - 284652 + | alginate biosynthesis regulatory protein hemC 284746 - 285681 + | porphobilinogen deaminase hemD 285688 - 286458 + | uroporphyrinogen-III synthase ACIAD0288 286467 - 287297 + | hypothetical protein ACIAD0289 287313 - 288506 + | hypothetical protein ACIAD0290 288515 - 288955 + | putative thioesterase TERM 310 289008 - 289033 + F 71 -6.3 -4.20712 | opp_overlap 289010, overlap 289010 GAAAGTAATGAATCA AATCGATTTAT TTAA ATAAATCGATG TTTTAAGATGTTGTG TERM 311 289031 - 289010 - f 82 -8.9 -4.02021 | opp_overlap 289008 289010 AAGTAATGAATCAAA TCGATTTAT TTAA ATAAATCGA TGTTTTAAGATGTTG TERM 312 289010 - 289031 + F 77 -8.9 -3.69449 | opp_overlap 289010, overlap 289008 AAGTAATGAATCAAA TCGATTTAT TTAA ATAAATCGA TGTTTTAAGATGTTG TERM 313 289061 - 289091 + F 93 -10.7 -3.90291 | opp_overlap 289067 289082, overlap 289083 289085 GTGATTACTTGATTA TTCAAAGCAATAT AAATA GTATTGCTTTGAA TTTAATTCAAAGAAT TERM 314 289083 - 289105 + F 83 -6.4 -5.01858 | opp_overlap 289067 289082, overlap 289061 289085 289094 CAATATAAATAGTAT TGCTTTGAAT TTA ATTCAAAGAA TTATTTTTTTATTTG TERM 315 289094 - 289108 + F 95 -5.8 -6.04953 | opp_overlap 289082, overlap 289085 289083 GTATTGCTTTGAATT TAATTC AAA GAATTA TTTTTTTATTTGTCT ACIAD0291 289162 - 289488 + | putative DNA binding protein TERM 316 289559 - 289518 - f 70 -8.2 -3.20941 | opp_overlap 289494 289530, overlap 289530 CATGAATGACCAATA TGCTTAATAAAACCAAGC TTGAAT GCTTGGTTTTTTTATACA AGTGAATTGGCGATG TERM 317 289547 - 289530 - f 83 -7 -4.65078 | opp_overlap 289530, overlap 289518 ATATGCTTAATAAAA CCAAGC TTGAAT GCTTGG TTTTTTTATACAAGT TERM 318 289530 - 289547 + F 93 -7 -5.61596 | opp_overlap 289530 289518 ATATGCTTAATAAAA CCAAGC TTGAAT GCTTGG TTTTTTTATACAAGT ACIAD0292 289651 - 290394 + | putative general secretion pathway protein ACIAD0293 290394 - 291239 + | putative general secretion pathway protein ACIAD0294 291280 - 293598 + | putative general secretion pathway protein ACIAD0295 293665 - 294321 + | hypothetical protein TERM 319 294347 - 294375 + F 100 -16.2 -5.26316 | opp_overlap 294352 GCTAGACAAACGTCT GTAAAGGCATGC GAAAA GCATGCCTTTAC TTTTTTATAAGGTGC TERM 320 294370 - 294352 - f 86 -10.3 -3.56862 | opp_overlap 294347 ACAAACGTCTGTAAA GGCATGC GAAAA GCATGCC TTTACTTTTTTATAA gph 294355 - 295059 + | phosphoglycolate phosphatase trpE 295163 - 296656 + | anthranilate synthase component I TERM 321 296664 - 296685 + F 87 -11.7 -3.17798 | TTTTATGAGTTTTTA GCGGTTTTT TTAA AAAAACCGC TTGCATCGTTTCTGA TERM 322 297140 - 297124 - f 81 -10.9 -2.62983 | opp_overlap 297115 CTCAGTGGTAGAGCA CTCCCTT GGT AAGGGAG AGGTCTCGAGTTCAA TERM 323 297238 - 297207 - f 75 -9.6 -2.74604 | opp_overlap 297206 297214, overlap 297206 297214 AGAATTCACAAAGAT TTCAAAAGCAGGCT TATT AGTCTGCTTTTAAA GTATTGGGCGTCTGT TERM 324 297214 - 297231 + F 78 -7.7 -4.1964 | opp_overlap 297207 297206 297214, overlap 297206 ACAAAGATTTCAAAA GCAGGCT TATT AGTCTGC TTTTAAAGTATTGGG tufB 297344 - 298534 + | elongation factor Tu TERM 325 298555 - 298582 + F 86 -12.8 -2.95298 | overlap 298558 TAAATTTGCATTTTT CAAGCTGGGAGT CTAG ACTCTCGGCTTG TATGTGATAGGTCAG TERM 326 298558 - 298579 + F 77 -8.7 -3.6217 | overlap 298555 ATTTGCATTTTTCAA GCTGGGAGT CTAG ACTCTCGGC TTGTATGTGATAGGT secE 298742 - 299182 + | preprotein translocase subunit SecE nusG 299190 - 299723 + | transcription antitermination protein TERM 327 299759 - 299742 - f 72 -9.1 -2.72144 | opp_overlap 299742 299743, overlap 299741 GTATTGGTTGGAAAG CGCCCGA TTTA TCGGGCA TTGTTATTACAGCAT TERM 328 299742 - 299759 + F 73 -6.9 -3.94877 | opp_overlap 299742 299741, overlap 299743 GTATTGGTTGGAAAG CGCCCGA TTTA TCGGGCA TTGTTATTACAGCAT TERM 329 299743 - 299758 + F 80 -10.4 -2.96444 | opp_overlap 299742 299741, overlap 299742 TATTGGTTGGAAAGC GCCCGA TTTA TCGGGC ATTGTTATTACAGCA rplK 299837 - 300265 + | 50S ribosomal protein L11 rplA 300269 - 300964 + | 50S ribosomal protein L1 TERM 330 301003 - 301023 + F 79 -9.1 -3.35679 | AAAGTCCTGATTGTA GATTGAGTC CTT GATTCAATC TTCTGCATCAGGCGG rplJ 301204 - 301740 + | 50S ribosomal protein L10 rplL 301783 - 302148 + | 50S ribosomal protein L7/L12 TERM 331 302217 - 302190 - f 77 -5.5 -5.00884 | opp_overlap 302191, overlap 302191 ATCGGCTCCAAAAAA TGGCTGATGGC TCTTGG GTCATCAGCCT TTTTGCGTTACAATA TERM 332 302191 - 302216 + F 100 -11.9 -4.74504 | opp_overlap 302190 302191 TCGGCTCCAAAAAAT GGCTGATGGCT CTTG GGTCATCAGCC TTTTTGCGTTACAAT TERM 333 302216 - 302191 - f 77 -9 -3.60048 | opp_overlap 302191, overlap 302190 TCGGCTCCAAAAAAT GGCTGATGGC TCTTGG GTCATCAGCC TTTTTGCGTTACAAT TERM 334 302228 - 302248 + F 75 -6.9 -4.19678 | opp_overlap 302231 AGCCTTTTTGCGTTA CAATAATCG GCT CGATTTTTG TTTGTTCGAATGTAA TERM 335 302301 - 302341 + F 100 -11.5 -4.2679 | opp_overlap 302301 CGAAGTAATTTCAAA CGCTTACCAATATTTTT CTATCTT AAAAATATTGTTAAGCG TTTTGATACCACTTA TERM 336 302341 - 302301 - f 90 -11.5 -3.69434 | opp_overlap 302301 CGAAGTAATTTCAAA CGCTTACCAATATTTTT CTATCTT AAAAATATTGTTAAGCG TTTTGATACCACTTA TERM 337 302885 - 302862 - g 72 -9.6 -3.12395 | overlap 302861 CTCATGACTGAAAAT GGTACCTTTG TGAT CAATGGTACC GAGCGTGTAATCGTA TERM 338 305630 - 305619 - g 75 -2.2 -5.36441 | TTTGCAGAGAAAAAA CGCA AACT TGCA ACAGGTGATGAACTT rpoB 302457 - 306545 + | DNA-directed RNA polymerase subunit beta TERM 339 308775 - 308748 - g 89 -12.2 -3.37975 | opp_overlap 308743, overlap 308738 308735 AGCGATGATGGACAA CTTGTCTTTCAC CAAT GTGAAAAACAAG CAAGGTCAAGACGAG TERM 340 310786 - 310770 - g 81 -10.9 -3.36492 | GTTTGAACTGCACAA CGACTTC AGC GAAGTCG ATCAAGCGTTTAGTC rpoC 306586 - 310827 + | DNA-directed RNA polymerase subunit beta' TERM 341 310864 - 310849 - f 100 -10.4 -4.60949 | opp_overlap 310849 CAGATCATAAAGAAA GCCACC TTCG GGTGGC TTTTTTTTATCGTGT TERM 342 310849 - 310864 + F 100 -10.4 -6.00086 | opp_overlap 310849 CAGATCATAAAGAAA GCCACC TTCG GGTGGC TTTTTTTTATCGTGT TERM 343 311304 - 311281 - g 78 -9.6 -3.73107 | opp_overlap 311303, overlap 311295 311298 GGATCAAATGCCAAA GGTGGTAGCA GTAA TACCACCACC AGTAGTGCAGTCGGT ACIAD0310 311074 - 311430 + | hypothetical protein TERM 344 311456 - 311472 + T 90 -8 -5.19212 | opp_overlap 311456 TGTCTATCAGAAAAA GACGAC ACTAA GTCGTC TTTTTTAATGCTGAT TERM 345 311472 - 311456 - T 90 -8 -4.91109 | opp_overlap 311456 TGTCTATCAGAAAAA GACGAC ACTAA GTCGTC TTTTTTAATGCTGAT ACIAD0311 311962 - 311477 - | hypothetical protein TERM 346 312036 - 312019 - g 70 -9.9 -2.5076 | overlap 312018 312016 AACTATCACTAATAT GGCATTG ATGG CAATGCC CAATCTGACTAACAA ACIAD0312 312017 - 312958 + | hypothetical protein TERM 347 313903 - 313892 - g 71 -4.4 -4.89521 | ATATTTCAAAGAAAA CCAT GTTG ATGG CGGTCATCGCAATTG TERM 348 313906 - 313925 + G 70 -7.8 -3.73072 | overlap 313913 ACCATGTTGATGGCG GTCATCGC AATT GCGCTGAC TTTGGTCGCCCAGTT ACIAD0313 313078 - 314499 + | hypothetical protein TERM 349 314489 - 314508 + F 100 -10.8 -5.57054 | GATGGATTGCCGCAA TGGTGCTT TAAA AAGCACCA TTTTTTTAAGTTATT TERM 350 314520 - 314550 + F 89 -13.6 -2.65206 | opp_overlap 314522 314526, overlap 314517 314516 314526 ACCATTTTTTTAAGT TATTAATCAGAGTA AAT TGCTCTGATTAATA TCAATTCTGATTTAT TERM 351 314548 - 314522 - f 75 -9.6 -2.52676 | opp_overlap 314520 314517 314516 314526, overlap 314526 CATTTTTTTAAGTTA TTAATCAGAGTA AAT TGCTCTGATTAA TATCAATTCTGATTT TERM 352 314526 - 314544 + F 70 -8.2 -3.30453 | opp_overlap 314522 314526, overlap 314520 314517 314516 TTTTTAAGTTATTAA TCAGAGTA AAT TGCTCTGA TTAATATCAATTCTG ACIAD0314 314778 - 315404 + | putative outer membrane protein W TERM 353 315500 - 315523 + F 95 -5.4 -6.17292 | GCAATCGGCGATTTA GACCTTAA TGGAGAGC TTAAGGTC TTTTTTTTTCACTTT ACIAD0315 315637 - 315987 + | putative signal peptide TERM 354 317432 - 317421 - g 72 -7.2 -4.015 | opp_overlap 317418 317416 317421 GCACGTATGAAAGAA GGCC AAAA GGCC ATCTATTATGTGAGT htpG 316092 - 318014 + | heat shock protein 90 TERM 355 318053 - 318017 - T 100 -11.2 -5.08255 | opp_overlap 318028, overlap 318012 318019 318028 318052 ACTGTTAAAATAAAA CATTTAAAAAACCGAT CTAGT ATCGGTTTTTTAAACA CACTGTGGATAACTT TERM 356 318051 - 318019 - T 100 -13.8 -4.16397 | opp_overlap 318028, overlap 318012 318017 318028 TGTTAAAATAAAACA TTTAAAAAACCGAT CTAGT ATCGGTTTTTTAAA CACACTGTGGATAAC TERM 357 318042 - 318028 - T 79 -5.7 -5.19916 | opp_overlap 318028, overlap 318019 318017 AAAACATTTAAAAAA CCGAT CTAGT ATCGG TTTTTTAAACACACT TERM 358 318028 - 318042 + T 77 -5.7 -5.00884 | opp_overlap 318028 318019 318017 AAAACATTTAAAAAA CCGAT CTAGT ATCGG TTTTTTAAACACACT TERM 359 318056 - 318083 + T 83 -10 -3.79849 | opp_overlap 318056 318052 GGTTTTTTAAACACA CTGTGGATAACT TCAA GGTTATCCATAG TTGTTGCTGTGGTTA ACIAD0317 318893 - 318096 - | hypothetical protein TERM 360 319061 - 319049 - H 80 -4.9 -5.34365 | TGAGAACAAGAAAAA TAATC AGC GATTA AAAAGAAAATTATAA TERM 361 319093 - 319071 - H 72 -2.8 -5.3104 | CGATTAAAAAGAAAA TTATAAAGAT CTA ATCTTAACAA TTTATTTTTGGCTAA ACIAD0318 319380 - 320090 + | putative aspartate racemase TERM 362 320099 - 320121 + F 100 -9.2 -5.72622 | opp_overlap 320098 320099, overlap 320092 TAGCTGATCATGAAG GTTCATGCAT TTT GTGCATGAGC TTTTTTATTTATGCA ACIAD0319 320208 - 321506 + | putative proton/sodium-glutamate symport protein ACIAD0320 321630 - 321938 + | IS1236 transposase protein 1 TERM 363 322045 - 322028 - g 76 -7.7 -4.07885 | TATGCCTGGCGAAAA CGCCAGA CCAA TCTAGCG CAGAAATATAATGAT ACIAD0321 321947 - 322804 + | IS1236 transposase protein 2 ACIAD0323 323703 - 322807 - | LysR family transcriptional regulator TERM 364 323222 - 323208 - G 78 -4.4 -5.24129 | GTTTTGCAGAAAAAA TTTTAT GGC ATAAAA ACTGTGGATTCATCA TERM 365 324074 - 324059 - R 76 -4 -5.21709 | TCTTAGATTAAAAAA TTAGAG GGAA CTCCAA GTTAAATAAGAATAA ACIAD0324 325310 - 324126 - | hypothetical protein TERM 366 324805 - 324779 - G 82 -6.6 -4.7871 | overlap 324782 AATCATCACCAAAAA CGACACTTAAAC GGC GTTCAAGCGTAG GCAACTTGATTTTAC TERM 367 324955 - 324970 + g 75 -3.2 -5.12987 | TTAACTGATGTTCGA TCAGCC CATT GACTGA TTTGTTTTTGTTTAC TERM 368 325510 - 325471 - R 73 -4.4 -4.98531 | gap 2, opp_overlap 325509 GCGCCAAAGTAAAAA TGCGGCCCAGATAGCATG ATATAA CATAC--CCTGAGCCGCA ATTGGTCTAATTGTT ACIAD0328 325781 - 325551 - | hypothetical protein TERM 369 325647 - 325626 - G 80 -8.7 -3.93057 | overlap 325618 325628 GCTAAAAGTACCAAA TACGGGCAG AATG CTACCCGCA GCTGCACCAATTAAA TERM 370 325645 - 325628 - G 73 -9.1 -3.54516 | overlap 325626 325618 TAAAAGTACCAAATA CGGGCAG AATG CTACCCG CAGCTGCACCAATTA TERM 371 326326 - 326316 - g 76 -2.6 -5.28826 | AAATTTTATAAAAAA TTAA AAA TTAA GCTCGTCACAGAAAA ACIAD0330 326136 - 326363 + | hypothetical protein TERM 372 326599 - 326576 - T 100 -10.4 -6.02919 | opp_overlap 326576 GCAGAAACAAAAAAA CCTCTCTTAA TGAC TCAAGAGAGG TTTATAAAATATCAT TERM 373 326576 - 326599 + T 79 -8.2 -3.91412 | opp_overlap 326576 GCAGAAACAAAAAAA CCTCTCTTAA TGAC TCAAGAGAGG TTTATAAAATATCAT ACIAD0331 327491 - 326784 - | putative dithiol-disulfide isomerase involved in polyketide biosynthesis TERM 374 326973 - 326986 + g 71 -2.4 -5.20216 | opp_overlap 326973 CCCAGAAATATTTAA TTGC TCATGC GCAA TTTTTTCATCATGTC TERM 375 327210 - 327221 + g 75 -5.8 -4.59773 | overlap 327217 TGCGTTAAAACTATT GCCA GAGT TGGC TTTTTGCCACTGGAA ACIAD0332 327653 - 328417 + | hypothetical protein TERM 376 328700 - 328685 - g 76 -7.6 -4.11751 | opp_overlap 328684 ATGAACTTTCTAAAA CGATCA GCTT TGATCG CTGCATTTGCTTTGA ACIAD0333 328667 - 329164 + | signal peptide TERM 377 329197 - 329167 - T 100 -12.7 -4.41844 | opp_overlap 329173, overlap 329173 AAAAGGCCGATAAAA TAAAAATCCCCGC ATTGA GCGGGGATTTTTT ATCTTGGTATTAATT TERM 378 329191 - 329173 - T 100 -11.7 -5.54907 | opp_overlap 329173, overlap 329167 CCGATAAAATAAAAA TCCCCGC ATTGA GCGGGGA TTTTTTATCTTGGTA TERM 379 329173 - 329191 + T 100 -11.7 -5.49569 | opp_overlap 329173 329167 CCGATAAAATAAAAA TCCCCGC ATTGA GCGGGGA TTTTTTATCTTGGTA fadA 330383 - 329211 - | 3-ketoacyl-CoA thiolase TERM 380 330301 - 330312 + g 78 -5.8 -4.81249 | TCTGCGCGTACATTG CGGA ACAT TCCG TTTTTAGATTTGCCC fadB 332550 - 330397 - | multifunctional fatty acid oxidation complex subunit alpha TERM 381 330726 - 330740 + g 100 -10 -5.09521 | CAATGACTTCATATG CGGTTG AAT CAACCG TTTTTGCTTTCTTGC TERM 382 331995 - 332025 + g 81 -5.5 -5.08824 | opp_overlap 331994, overlap 331998 CTGAAACTACAGCAT CCA-CGGCACCATCT TTG AG-TGCTGCCGCTGG TTTTTTCGGTGCCGC TERM 383 332109 - 332124 + g 83 -9 -4.16182 | opp_overlap 332108 CAGTACCGCCAAAGC CTGGGA AAAT TCCCAG TTTAATTTCTGGTAG TERM 384 332815 - 332873 + H 89 -11.3 -3.45514 | gap 1, opp_overlap 332816 332819, overlap 332816 ATACACAGTTATTAA ATTAGGGGCTTAGGAAGTT-ACCTTATT TTTT AATATGCTTAACTTCCTAAGCCCCAAAA TTAATATTCTATGTG TERM 385 332816 - 332872 + H 95 -14.8 -2.66585 | gap 1, opp_overlap 332816 332819, overlap 332815 TACACAGTTATTAAA TTAGGGGCTTAGGAAGTT-ACCTTATT TTTT AATATGCTTAACTTCCTAAGCCCCAAA ATTAATATTCTATGT TERM 386 332872 - 332816 - H 100 -14.8 -3.78736 | gap 1, opp_overlap 332816 332815, overlap 332819 TACACAGTTATTAAA TTAGGGGCTTAGGAAGTT-ACCTTATT TTTT AATATGCTTAACTTCCTAAGCCCCAAA ATTAATATTCTATGT TERM 387 332869 - 332819 - H 100 -16.5 -2.97934 | gap 1, opp_overlap 332816 332815, overlap 332816 ACAGTTATTAAATTA GGGGCTTAGGAAGTT-ACCTTATT TTTT AATATGCTTAACTTCCTAAGCCCC AAAATTAATATTCTA TERM 388 332897 - 332916 + H 86 -2.9 -5.88197 | CTATGTGTGAATTAT TAGACAG AAAGGC TTGTCTA TTTTTTTATCTTTGG ACIAD0336 332991 - 333956 + | hypothetical protein TERM 389 333967 - 334002 + F 91 -12.2 -3.73953 | opp_overlap 333973, overlap 333969 333973 ACTAGTTTAGAGTTT GAGAAATCTCAAAAAT AGGT ATTTTTGAGATTTCTA TTTAATCAAAATAAT TERM 390 333969 - 334000 + F 100 -14.8 -3.45324 | opp_overlap 333973, overlap 333967 333973 TAGTTTAGAGTTTGA GAAATCTCAAAAAT AGGT ATTTTTGAGATTTC TATTTAATCAAAATA TERM 391 333996 - 333973 - f 83 -9.8 -3.88787 | opp_overlap 333969 333967 333973 TTAGAGTTTGAGAAA TCTCAAAAAT AGGT ATTTTTGAGA TTTCTATTTAATCAA TERM 392 333973 - 333996 + F 100 -9.8 -4.36903 | opp_overlap 333973, overlap 333969 333967 TTAGAGTTTGAGAAA TCTCAAAAAT AGGT ATTTTTGAGA TTTCTATTTAATCAA TERM 393 334550 - 334525 - g 70 -3.9 -4.77036 | opp_overlap 334525, overlap 334511 334510 CGGCACTATTAAAAA CATTGCCATCT ATTA AGGCGGCGATG TTTACCGAGCTTGCA lpxO 334122 - 335036 + | beta-hydroxylase TERM 394 335058 - 335045 - f 85 -9.5 -3.92659 | opp_overlap 335045 GTTTTAAAATTTAAA CGCCC AATA GGGCG TTTTTTTTTGAGATG TERM 395 335045 - 335058 + F 100 -9.5 -6.09133 | opp_overlap 335045 GTTTTAAAATTTAAA CGCCC AATA GGGCG TTTTTTTTTGAGATG ACIAD0339 335212 - 335769 + | hypothetical protein uvrC 335860 - 337659 + | excinuclease ABC subunit C ACIAD0341 337747 - 338550 + | putative acyl-CoA thioesterase II TERM 396 338878 - 338890 + G 88 -6.9 -5.11613 | opp_overlap 338877 CTTTAAACCAGACAT CGGCT TTT GGCCG TTTTTTAGATCCTGT pgsA 338652 - 339245 + | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyl-transferase TERM 397 339276 - 339258 - f 82 -7.4 -4.62302 | opp_overlap 339258 TAAGATGTGTAAAAA GCCTTTCA AGT TGAAGGGC TTTTTTATATGTTTA TERM 398 339258 - 339276 + F 100 -9.6 -5.51046 | opp_overlap 339258 TAAGATGTGTAAAAA GCCTTTCA AGT TGAAGGGC TTTTTTATATGTTTA ada 339360 - 340220 + | transcription regulator AraC TERM 399 340322 - 340332 + G 70 -2.6 -5.02476 | GCCGAAGCCGAGCAG TATT TTC AATA TTTTTTGAAGCATCT alkB 340217 - 340825 + | DNA repair system specific for alkylated DNA ACIAD0347 341667 - 340879 - | putative transcriptional regulator ACIAD0349 342115 - 344214 + | putative fusaric acid resistance protein ACIAD0350 344198 - 344410 + | hypothetical protein ACIAD0351 344445 - 345461 + | putative fusaric acid resistance protein FusE TERM 400 345489 - 345516 + T 100 -10.6 -5.29846 | opp_overlap 345489 TTTTTGATCGAAAAA GATGGCTTGACC CTGT GGTTGGGCCATC TTTTTATTTAGGGTT ACIAD0352 345967 - 345524 - | hypothetical protein TERM 401 345871 - 345859 - G 71 -4.7 -4.62069 | opp_overlap 345863, overlap 345860 CCTTCATCGGAAAAA GCGCC AGT GGCGT ACTGCTTTCAATCGC ACIAD0353 346514 - 345960 - | hypothetical protein recN 348291 - 346630 - | protein used in recombination and DNA repair TERM 402 348473 - 348458 - g 86 -3.2 -5.69023 | opp_overlap 348458 348459, overlap 348459 AAAATAGCAAAAAAA CCGCAA CAGC TTGCGC TTCTAAACCAGCGTT TERM 403 348704 - 348691 - g 70 -3.9 -4.86001 | opp_overlap 348691 ATTATCTGAGAAAAA TATTG ATCC CAATA TCTATGATGGGTTAA TERM 404 348868 - 348882 + G 70 -2.8 -5.04356 | AATAGAATCTCCTGA GCAAAA TAT TATTGC TTTTTCCTTATTTGG TERM 405 348965 - 348975 + G 71 -4.6 -4.67353 | AAAATTTATCCCGAA TGGC GCT GCCG TTTTTACGTCGATGA TERM 406 349052 - 349090 + G 76 -2.5 -5.31877 | gap 1 CAGCTTGTACTGGTT TCCCCAGAACAA-CAACA AATC TCTGGATTGTTCTGGCGA TTTTTTGTGATGGAT ACIAD0355 348407 - 349714 + | hypothetical protein ACIAD0356 349793 - 350119 + | hypothetical protein TERM 407 350156 - 350189 + F 100 -10.5 -5.37043 | opp_overlap 350161, overlap 350161 TAAAATAGTTGTGTT AAAAATCCTGTGAAG CTGG CTTTACAGGATTTTA TTTTTTATATGCGGT TERM 408 350184 - 350161 - f 84 -8.2 -4.57073 | opp_overlap 350156 350161 TAGTTGTGTTAAAAA TCCTGTGAAG CTGG CTTTACAGGA TTTTATTTTTTATAT TERM 409 350161 - 350184 + F 100 -10.4 -5.51612 | opp_overlap 350161, overlap 350156 TAGTTGTGTTAAAAA TCCTGTGAAG CTGG CTTTACAGGA TTTTATTTTTTATAT ACIAD0357 350219 - 350965 + | putative tRNA/rRNA methyltransferase TERM 410 351279 - 351292 + G 70 -5.9 -4.37763 | overlap 351291 TTCTTATATGCGCCT GCGGC ACAT GCTGC TATTTTTTTGAATGG ACIAD0358 351006 - 351923 + | hypothetical protein coaE 352507 - 351920 - | dephosphocoenzyme A kinase pilD 353373 - 352513 - | type 4 prepilin-like proteins leader peptide processing enzyme pilC 354599 - 353373 - | type 4 fimbrial assembly protein TERM 411 353841 - 353827 - G 77 -8.6 -4.00526 | AATCGGAGAACCAAA CGATCA AGT TGATCG CGAAAGCGTTTACTG pilB 356367 - 354628 - | type 4 fimbrial biogenesis protein TERM 412 355231 - 355207 - G 84 -10.1 -3.80461 | opp_overlap 355201 TAATGCAGCAGCAAA TGTCAGTCCAA CCT TTGGATTGACA TTGACCTGATTGACG tpiA 356605 - 357402 + | triosephosphate isomerase TERM 413 357496 - 357509 + G 74 -6.7 -4.30576 | CACGGTAAAGGTGCT GATGC CGGT GCATC TTTTGGTGGTGGCGG secG 357412 - 357741 + | preprotein translocase subunit SecG TERM 414 357982 - 357963 - f 80 -5 -5.24989 | opp_overlap 357963 CCAGAGATTAAAAAA GGTATCTT TCAT AAGATGCC TTTTTTTGTTTGTGC TERM 415 357963 - 357982 + F 100 -7.2 -6.02919 | opp_overlap 357963 CCAGAGATTAAAAAA GGTATCTT TCAT AAGATGCC TTTTTTTGTTTGTGC TERM 416 358631 - 358650 + F 80 -7.1 -4.58395 | CCAAGTTTCTAAGAG GGCTCAC AGATAG GTGGGCC TTTTTGCACAGTGGA TERM 417 358691 - 358705 + F 95 -8.5 -5.49234 | opp_overlap 358691 358690 358688 CTGTGCAAAATATAG GGGCG ATTAA CGCCC TTTTTTATTGGCTAT TERM 418 358778 - 358793 + F 71 -9 -3.05384 | opp_overlap 358771 358791 TATAGTAAGTCTGAA TCGGTC TAAA GACCGA TTGAATCGCACAAAA ACIAD0367 358821 - 359345 + | hypothetical protein nusA 359381 - 360865 + | transcription elongation factor NusA TERM 419 361821 - 361806 - g 82 -7.6 -4.57073 | opp_overlap 361794, overlap 361791 CATGGTTTTGAAAAA CCTGTT AAAA AACAGG TATACGATGTTGAAA infB 360876 - 363575 + | translation initiation factor IF-2 rbfA 363575 - 363976 + | ribosome-binding factor A TERM 420 363978 - 364017 + T 83 -11.1 -3.14013 | gap 2, opp_overlap 363981 363989, overlap 363981 363983 363989 AAGATAAGTCTTAAG C--CATATAAAAAGCCACC TGCG GGTGGCTTTTTATATGTAG TCATTTATTGATCTG TERM 421 363981 - 364012 + T 100 -17.6 -2.91869 | opp_overlap 363981 363989, overlap 363978 363983 363989 ATAAGTCTTAAGCCA TATAAAAAGCCACC TGCG GGTGGCTTTTTATA TGTAGTCATTTATTG TERM 422 364012 - 363981 - T 100 -17.6 -2.5409 | opp_overlap 363981 363978 363983 363989, overlap 363989 ATAAGTCTTAAGCCA TATAAAAAGCCACC TGCG GGTGGCTTTTTATA TGTAGTCATTTATTG TERM 423 363983 - 364010 + T 100 -15.8 -2.99874 | opp_overlap 363981 363989, overlap 363981 363978 363989 AAGTCTTAAGCCATA TAAAAAGCCACC TGCG GGTGGCTTTTTA TATGTAGTCATTTAT TERM 424 364004 - 363989 - T 100 -10.4 -5.00642 | opp_overlap 363983 363981 363978 363989, overlap 363981 TAAGCCATATAAAAA GCCACC TGCG GGTGGC TTTTTATATGTAGTC TERM 425 363989 - 364004 + T 100 -10.4 -5.05601 | opp_overlap 363989 363981, overlap 363983 363981 363978 TAAGCCATATAAAAA GCCACC TGCG GGTGGC TTTTTATATGTAGTC phaG 364438 - 364022 - | putative monovalent cation/H+ antiporter subunit G TERM 426 364284 - 364270 - G 73 -5.8 -4.4522 | GAAAAGCAGAATAAA TAATTG AAG CAATTA AAAAGCTACCCAGTC TERM 427 364485 - 364461 - R 73 -9.3 -2.92192 | TCCTAGTCAATTACA TGACCCGTTGT AAA ATAACGGGCCA GTGCTGCGGTAGATA phaF 364723 - 364448 - | pH adaptation potassium efflux system protein F phaE 365247 - 364720 - | pH adaptation potassium efflux system E transmembrane protein phaD 367058 - 365250 - | putative monovalent cation/H+ antiporter subunit D phaC 367426 - 367058 - | putative monovalent cation/H+ antiporter subunit C phaAB 370272 - 367423 - | putative monovalent cation/H+ antiporter subunit A TERM 428 367520 - 367501 - G 70 -7.2 -3.90425 | gap 1, overlap 367503 CACCGAAATCAATAA CA-TGGTCG CAC CGACCACTG TGGCATAAACACCCA TERM 429 367517 - 367503 - G 78 -10 -3.53094 | overlap 367501 CCGAAATCAATAACA TGGTCG CAC CGACCA CTGTGGCATAAACAC TERM 430 369492 - 369474 - G 80 -4.5 -5.15167 | CAGCACCAACAAAAA TTGGAGC TAAAC GCGCCAA CAAGAAAATTCCAGC TERM 431 370397 - 370387 - R 84 -4 -5.61913 | overlap 370389 AACAAAGAGAAAAAA TACA AGC TGTA TTGCGCAACTTGACA ACIAD0378 371967 - 370600 - | putative ATP binding site TERM 432 371722 - 371738 + g 70 -2.9 -5.00616 | opp_overlap 371722, overlap 371724 AAAGTGAACTGAAAT CGCAGTT TTA GACTGGG TTTTTTGAAAGGAAA ACIAD0379 373482 - 371980 - | putative DNA helicase TERM 433 373141 - 373164 + g 73 -7.4 -4.13945 | opp_overlap 373133 373146, overlap 373146 CATCAAACGACGCAA GGTAATCGGC TCCA GCCGATAATC TTTTGCCATAAAGCT TERM 434 373348 - 373326 - G 83 -11.3 -3.01708 | TAAATGCTAGATACA TGCCACGCC GCTCG GGCATGGCA TCACTAATCATTTGC hisIE 374265 - 373492 - | bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase TERM 435 373968 - 373995 + g 72 -9.2 -3.16177 | gap 1, overlap 373971 373973 AACAAGATTCACGGC CAGTATGGCAGGC GAT GCC-GCCATGTTG TTCAATCTGTAAAAT ACIAD0381 375744 - 374434 - | putative oxidoreductase; putative flavoprotein monooxygenase ubiB 377383 - 375764 - | 2-octaprenylphenol hydroxylase of ubiquinone biosynthetic pathway TERM 436 377111 - 377085 - G 75 -7.4 -4.25283 | ATTTGGGGATCAAAA GGTTTCACTTGA TCT TGAAGTAAAACC AGTTGAGACAAGATT ACIAD0383 378062 - 377397 - | hypothetical protein ubiE 379043 - 378075 - | S-adenosylmethionine: 2-DMK methyltransferase and 2-octaprenyl-6-methoxy-1,4-benzoquinone methylase ACIAD0385 379890 - 379177 - | hypothetical protein TERM 437 379272 - 379284 + g 72 -7.7 -3.76492 | TAATAAATTTTTCTG CCGAT TTC ATCGG TTTCATCGCATTAAA TERM 438 379440 - 379456 + g 72 -6.5 -4.29432 | opp_overlap 379433 CCAGTAAGGCAAGTT GCTGCAA ACG TTGCTGC TTTTGATCGAGTTTG ACIAD0386 380557 - 380381 - | hypothetical protein TERM 439 380784 - 380761 - H 80 -2.5 -5.64006 | overlap 380763 380779 AGGTAATGAAAAAAA GTTTTGTTT TTTTGT AAACAAATC ACATTTGTTGGAAAG ACIAD0387 380877 - 381461 + | putative fimbrial-like protein TERM 440 381551 - 381538 - g 71 -6.7 -4.0942 | opp_overlap 381538 TAGTCAGTATACAAA TGCTG GTGT CAGCA TAGATGGTACTCGCA ACIAD0388 381485 - 382192 + | putative fimbrial chaperone protein TERM 441 382210 - 382198 - f 70 -4.1 -4.80736 | GATGAAATAAAGAAA CACTC ATT GAGTA TTTAACGGTATGAAA ACIAD0389 382220 - 384772 + | putative fimbrial usher protein ACIAD0390 384773 - 385822 + | putative fimbrial protein pap 386766 - 388190 + | polyphosphate-AMP phosphotransferase TERM 442 388246 - 388208 - T 100 -14.1 -3.83668 | gap 1, overlap 388203 CAATATAGAACAGAA TGACTCTGATTCGG-ATC AAGA GATACCGAAACAGAGTCA CAGCATGATCAGTGA citA 389574 - 388255 - | citrate transporter TERM 443 389727 - 389756 + r 72 -2.8 -5.28942 | overlap 389733 GAATAACTTGCTGTT TTGATTGGGCAC CCGAAA GTGCCCTTTTAA TTTTTATTTAAACTG TERM 444 389733 - 389750 + r 90 -8.4 -4.88326 | overlap 389727 CTTGCTGTTTTGATT GGGCAC CCGAAA GTGCCC TTTTAATTTTTATTT ACIAD0396 390267 - 389764 - | hypothetical protein TERM 445 390310 - 390326 + H 79 -5.2 -5.1356 | GATTCAAGCGTTTAT TTTGAG AATGA CTCAAA TTTTTATTCATGACG TERM 446 392395 - 392383 - g 76 -7.7 -4.09511 | AAGACTGGCTCAAAA TCCTG ATG CAGGA CGTGATTGAGTTTGA TERM 447 393654 - 393687 + G 72 -8.1 -3.77111 | opp_overlap 393656 393660, overlap 393656 393657 TGGTTATCGTACTTA AATGAAGGTGACGCT GGAC AGCGTCGCCGTCGTA TTGTGGTTTTTAGTG TERM 448 393656 - 393685 + G 83 -10.7 -3.45037 | opp_overlap 393656 393660, overlap 393654 393657 GTTATCGTACTTAAA TGAAGGTGACGCT GGAC AGCGTCGCCGTCG TATTGTGGTTTTTAG TERM 449 393657 - 393684 + G 83 -12 -2.65938 | opp_overlap 393656 393660, overlap 393656 393654 TTATCGTACTTAAAT GAAGGTGACGCT GGAC AGCGTCGCCGTC GTATTGTGGTTTTTA TERM 450 393681 - 393660 - g 78 -10.1 -3.54408 | opp_overlap 393657 393656 393654, overlap 393656 TCGTACTTAAATGAA GGTGACGCT GGAC AGCGTCGCC GTCGTATTGTGGTTT recC 390432 - 394097 + | exonuclease V, gamma chain TERM 451 395057 - 395047 - g 73 -2.6 -5.1861 | TGGAGCAGGAAAAAA TTTT TAA AAAA TGTCCAGCAGATGTC recB 394104 - 397808 + | exonuclease V, beta chain recD 397904 - 399682 + | exonuclease V, alpha subunit TERM 452 399793 - 399771 - T 80 -7 -4.58663 | overlap 399773 ATGATCGTGCAAAAA TACTCAGCAT GGA ATGCAGAGCA AAACCGCAAAAGAAT TERM 453 399791 - 399773 - T 76 -7.4 -3.90762 | overlap 399771 GATCGTGCAAAAATA CTCAGCAT GGA ATGCAGAG CAAAACCGCAAAAGA TERM 454 399874 - 399903 + T 100 -10.1 -5.4492 | ACTTACAGCCGCTAA GCCTTGTAGTTTT GGGA GAGACTACAGGGC TTTTTTATGTCTATA TERM 455 400137 - 400121 - T 77 -5.9 -4.81852 | TGATAATGAAGAAAA GAGTTCT AAG AAAACTC TCAATATAATAGAAA TERM 456 400196 - 400214 + T 100 -13.2 -5.49579 | opp_overlap 400196 ACTACAGCGCATAAA GCCCAAGT CTG ACTTGGGC TTTTATTTTTTATAC TERM 457 400214 - 400196 - T 100 -13.2 -3.91412 | opp_overlap 400196 ACTACAGCGCATAAA GCCCAAGT CTG ACTTGGGC TTTTATTTTTTATAC ACIAD0400 401552 - 400224 - | putative beta-lactamase TERM 458 400571 - 400592 + g 73 -3.7 -4.96501 | opp_overlap 400571 400590, overlap 400562 AAGTAGCGCGAAACA CGGTTTTTG AAGT TAAAATCCG TTTATTTTTATAAAC rpsO 401802 - 402071 + | 30S ribosomal protein S15 TERM 459 402167 - 402190 + F 100 -13.2 -4.48483 | opp_overlap 402170 ACTAGGCAAATTCTA GAAGGGGCGA ATGT TCGCTCCTTC TTTGTGTTTATTCTC pnp 402324 - 404417 + | polynucleotide phosphorylase/polyadenylase TERM 460 404431 - 404462 + F 100 -13.2 -4.49756 | opp_overlap 404432 404439, overlap 404432 404439 AAGCCTGTTTCGTAA ATAAAAAAGTCCGC TTCG GCGGACTTTTTTAA TTTTAGTATTTACAG TERM 461 404432 - 404461 + F 100 -16.7 -3.2913 | opp_overlap 404432 404439, overlap 404431 404439 AGCCTGTTTCGTAAA TAAAAAAGTCCGC TTCG GCGGACTTTTTTA ATTTTAGTATTTACA TERM 462 404461 - 404432 - f 100 -16.7 -3.53091 | opp_overlap 404432 404431 404439, overlap 404439 AGCCTGTTTCGTAAA TAAAAAAGTCCGC TTCG GCGGACTTTTTTA ATTTTAGTATTTACA TERM 463 404439 - 404454 + F 100 -10.4 -5.48054 | opp_overlap 404432 404439, overlap 404432 404431 TTCGTAAATAAAAAA GTCCGC TTCG GCGGAC TTTTTTAATTTTAGT TERM 464 404454 - 404439 - f 100 -10.4 -5.63517 | opp_overlap 404439 404432 404431, overlap 404432 TTCGTAAATAAAAAA GTCCGC TTCG GCGGAC TTTTTTAATTTTAGT TERM 465 404823 - 404848 + G 71 -4.7 -4.65895 | TATTTTTTTAAGTCG TGAACGCATGA CTGA TCATGAGCTCA TTTTTAAATGGGCAG ACIAD0403 404695 - 405990 + | putative magnesium Mg(2+)/cobalt Co(2+) transport protein crcB 406178 - 406558 + | high-copy crc-csp restores normal chromosome condensation in presence of camphor or mukB mutations ACIAD0405 406989 - 406666 - | hypothetical protein TERM 466 406747 - 406734 - G 70 -8.1 -3.58162 | overlap 406736 CTAGCATTAAAGCAA CAGCC GGCA GGCTG GCATCAAAGTCACGT cbpA 407942 - 407001 - | curved DNA-binding protein TERM 467 408093 - 408063 - R 100 -13.4 -4.73388 | opp_overlap 408055 408092 AATGTCTATGAAAAA GGCCTGACCAGA GAAATAT TCTGATCAGGCC CTATGCAATATAATC TERM 468 408128 - 408107 - R 95 -13.1 -3.68988 | opp_overlap 408097 408094 408092 CCCTATGCAATATAA TCGGCGTTA TAAG TAACGCCGA TATAGCATCGTGTTG hslO 409032 - 408145 - | heat shock protein HSP33 kef 410915 - 409071 - | glutathione-regulated potassium-efflux system protein (K(+)/H(+) antiporter) TERM 469 410334 - 410313 - G 84 -3.7 -5.52347 | gap 1, overlap 410315 AACAAAACGAAAAAA TGGCCGC-AT GAT ATAGCGGCTA AATAAAAATAGCCCT priA 413220 - 410989 - | primosomal protein N' TERM 470 412053 - 412075 + g 76 -7 -4.43307 | opp_overlap 412035, overlap 412055 412056 CGACACCAGCACGCT GATTGAGCTG GAG TAGCTCAAGC TTATTTTGTTCCACC TERM 471 412056 - 412078 + g 79 -7 -4.63218 | opp_overlap 412035, overlap 412055 412053 CACCAGCACGCTGAT TGAGCTGGAG TAG CTCAAGCTTA TTTTGTTCCACCAGA TERM 472 414043 - 414056 + G 71 -4.5 -4.58946 | ATTTTTAATGAGTTT TGGCG TGAT TGCCA TTATTTTGTTTATAC xcpS 413360 - 414565 + | general secretion pathway protein F TERM 473 414913 - 414903 - g 71 -6.8 -4.08853 | opp_overlap 414906 TGCAACAGCAAAGAA CTGG CTA CCAG GTGGCTATGTAAAAG xcpT 414571 - 415077 + | general secretion pathway protein G ACIAD0413 415341 - 415679 + | hypothetical protein ACIAD0414 415815 - 416009 + | hypothetical protein TERM 474 416027 - 416015 - T 76 -2.7 -5.40474 | ATTTCCCTAAAAAAA TGAAT TTA ACTCA TCAACATGTATAAAA TERM 475 416068 - 416046 - T 100 -13.5 -5.65177 | opp_overlap 416046 ACATGTATAAAAAAA CCGAGATGG GTGAA CCATCTCGG TTTTAAAAGCCCGAC TERM 476 416046 - 416068 + T 100 -13.5 -4.07568 | opp_overlap 416046 ACATGTATAAAAAAA CCGAGATGG GTGAA CCATCTCGG TTTTAAAAGCCCGAC lnt 417654 - 416095 - | apolipoprotein N-acyltransferase, copper homeostasis protein TERM 477 416425 - 416457 + g 70 -9.4 -2.81966 | gap 1, opp_overlap 416424 416433, overlap 416430 AGCATCGTTAGATAC CGTAAC-CAGAAAAT CGCT ATTTTCTGCGTTGCG TCTGGTCAGGTTTGG corC 418490 - 417651 - | magnesium and cobalt efflux protein TERM 478 418294 - 418319 + g 72 -6.1 -4.36914 | AAGCTAATGATTGAG GTGCGAGGAGT CATG ACTTCGCGTAC TTTTGTGGCAGGAAG sirA 418671 - 418934 + | small ubiquitous protein required for normal growth aroE 419815 - 419027 - | shikimate 5-dehydrogenase ACIAD0419 420098 - 419892 - | putative Zinc-binding protein TERM 479 420458 - 420474 + G 85 -2.2 -5.8901 | TCCATACACTTTATC CTGTGC AAGTC GAACAG TTTTTTATTTTATAT TERM 480 420523 - 420537 + G 76 -2.8 -5.30575 | opp_overlap 420511 AATCCTGCACAGCGC TGGC TGAATAT GCCA TTTTTTGAGTTTTTA ACIAD0420 420181 - 420819 + | methyltransferase ACIAD0421 420809 - 422014 + | putative flavoprotein ACIAD0422 422112 - 422507 + | hypothetical protein TERM 481 422596 - 422650 + T 100 -11.1 -4.88918 | opp_overlap 422601 422603 422614, overlap 422603 422605 422614 GGCATGAATTAATTT TAAGAGACAAATAAAAAACCCAGAT GAGGA ATCTGGGTTTTTTATGCGTTTATTA TTTTATTTGGCCTGA TERM 482 422645 - 422601 - T 83 -11 -3.11178 | opp_overlap 422596 422603 422605 422614, overlap 422603 422614 GAATTAATTTTAAGA GACAAATAAAAAACCCAGAT GAGGA ATCTGGGTTTTTTATGCGTT TATTATTTTATTTGG TERM 483 422643 - 422603 - T 90 -13.6 -3.10879 | opp_overlap 422596 422603 422605 422614, overlap 422601 422614 ATTAATTTTAAGAGA CAAATAAAAAACCCAGAT GAGGA ATCTGGGTTTTTTATGCG TTTATTATTTTATTT TERM 484 422603 - 422643 + T 100 -11.4 -4.78266 | opp_overlap 422603 422601 422614, overlap 422596 422605 422614 ATTAATTTTAAGAGA CAAATAAAAAACCCAGAT GAGGA ATCTGGGTTTTTTATGCG TTTATTATTTTATTT TERM 485 422605 - 422641 + T 86 -12.6 -2.63539 | opp_overlap 422603 422601 422614, overlap 422603 422596 422614 TAATTTTAAGAGACA AATAAAAAACCCAGAT GAGGA ATCTGGGTTTTTTATG CGTTTATTATTTTAT TERM 486 422632 - 422614 - T 95 -8.9 -5.76237 | opp_overlap 422605 422603 422596 422614, overlap 422603 422601 GAGACAAATAAAAAA CCCAGAT GAGGA ATCTGGG TTTTTTATGCGTTTA TERM 487 422614 - 422632 + T 95 -8.9 -5.33866 | opp_overlap 422614 422603 422601, overlap 422605 422603 422596 GAGACAAATAAAAAA CCCAGAT GAGGA ATCTGGG TTTTTTATGCGTTTA ACIAD0424 422985 - 422653 - | putative type III effector HopPmaJ rpmE2 423500 - 423252 - | 50S ribosomal protein L31 type B ACIAD0426 424923 - 423592 - | hypothetical protein TERM 488 424668 - 424686 + g 75 -8.8 -3.72576 | AGATATCTTTATATT GTGAGGCA ATT TGCCCCAC TTTCATGACCGCGCC TERM 489 424905 - 424915 + g 82 -6.8 -4.88222 | CCATATTAGATACCT TCGC ATA GCGA TTTTTCAGTTTTGAT TERM 490 425495 - 425536 + G 75 -3.2 -5.23316 | gap 2 CATTTAGTATTTATT GAGCATTTGC-GTT-TGGAT GCGA GTCCAGAACAGCAAAAGTTC TTTTTTAATCTGGTG TERM 491 425608 - 425593 - g 79 -3.3 -5.40072 | overlap 425575 425595 CTTTTCTGAAAAAAA TGCAA AAACTG TTGCA GATTTAGAAACGACC TERM 492 426169 - 426154 - g 71 -4.6 -4.68384 | opp_overlap 426154 426155, overlap 426155 ACCTAGCGAAGAAAA TGTCGC ACAA GCGACC TTACTTGTGGCGGAA ACIAD0427 425141 - 426397 + | putative acyl-CoA dehydrogenase ACIAD0428 426437 - 427687 + | putative acyl-CoA dehydrogenase TERM 493 427702 - 427740 + T 100 -12.7 -4.83246 | opp_overlap 427702 ATATTCTGCTTCAAA TCCTTTCAATGGATTGA TGACC TTAATCCGTTGGAAGGA TTTCTTTCTTTATGA norM 429099 - 427750 - | multidrug ABC transporter TERM 494 428849 - 428862 + g 70 -5.9 -4.4078 | ACAGGAATATGTTCT GGCGT TCTG GCGCC TTTTGCTTCCGCGAC TERM 495 429087 - 429076 - G 70 -7.2 -3.75153 | CTGTTTTAACTCAAA GCGG AAGC CCGC AACTTTTGCCACAAA ACIAD0431 429589 - 429128 - | hypothetical protein ACIAD0432 429708 - 430865 + | putative oxidase; putative coproporphyrinogen III oxidase TERM 496 430978 - 430951 - T 100 -14.3 -5.06816 | AGTCTTCAATAAAAA TGGCTAGGGAA TAGGGC TTCCCTAGCCA AGTCGAATCATTAAC ACIAD0433 431744 - 430989 - | short chain dehydrogenase TERM 497 431076 - 431062 - G 70 -5.6 -4.34737 | opp_overlap 431062 431061 TCAGTAACCAAGAAA CGTACC AAA GGTTCG ATATCTTCAATTTTG TERM 498 431787 - 431815 + H 73 -9.1 -2.83641 | opp_overlap 431786 431785, overlap 431785 431813 TAATCACAATTAATT TGATTGAAATTCA GTC TAAATTTCAATCA TGTAATGATCAATTG ACIAD0434 431869 - 432768 + | LysR family transcriptional regulator TERM 499 432799 - 432778 - T 100 -10.2 -5.19879 | opp_overlap 432778 TCTTAAATACAAAAA CCACTTCC TGTTTG GGAAGTGG TTCATAGCTTAAAGT TERM 500 432778 - 432799 + T 86 -10.9 -3.22091 | opp_overlap 432778 TCTTAAATACAAAAA CCACTTCCT GTTT GGGAAGTGG TTCATAGCTTAAAGT ahpC 433387 - 432824 - | alkyl hydroperoxide reductase protein TERM 501 433563 - 433585 + r 88 -7.8 -5.07567 | opp_overlap 433563 TCTAAACAAAAAAAA GCCTTAAC ATGATCA GTTAAGGC TTTTTTAGAATCTGG TERM 502 433585 - 433563 - R 100 -7.8 -6.23545 | opp_overlap 433563 TCTAAACAAAAAAAA GCCTTAAC ATGATCA GTTAAGGC TTTTTTAGAATCTGG TERM 503 433960 - 433946 - R 70 -2.1 -5.24531 | ACTGTTTATAAAAAA CACGA TTTCC TCATG TTCAGCTAAAAAATG ACIAD0437 435825 - 433978 - | acyl-CoA synthetase TERM 504 434136 - 434150 + g 86 -5.6 -5.252 | overlap 434138 GATATTTAAATGTTC CTGTCG TTT CGACCG TTTTTTGTACACGTA TERM 505 434603 - 434614 + g 70 -5.8 -4.2558 | CCCGTTTTCACTTTC TGGC AGTA GCCA TTTTGATCACGAATA TERM 506 435988 - 435949 - R 80 -11 -2.50345 | opp_overlap 435958, overlap 435958 ATCTGACAAAAGTAT CAAAAAAAACCTAGTCAC CGAA ATGACTAGGTTTGTTTTA TTGACCTGCAATTTT TERM 507 435958 - 435979 + r 95 -8.8 -4.87892 | opp_overlap 435949 435958 AAGTATCAAAAAAAA CCTAGTCA CCGAAA TGACTAGG TTTGTTTTATTGACC TERM 508 435979 - 435958 - R 100 -9.5 -5.89827 | opp_overlap 435958, overlap 435949 AAGTATCAAAAAAAA CCTAGTCAC CGAA ATGACTAGG TTTGTTTTATTGACC rne 439425 - 436009 - | ribonuclease E (RNase E): endoribonuclease for rRNA processing and mRNA degradation TERM 509 437671 - 437683 + g 82 -7.7 -4.4648 | AACCATTTGCTCAAT TGCAG CAG CTGCA TTTTGTGCTGAGCGT TERM 510 439087 - 439107 + g 74 -6.7 -4.31587 | opp_overlap 439086 439087, overlap 439082 GATAAAGGTAGAAAG CGCTGCACC TTT GTTGCCGCG TTCTTCTTTTTCAAC ACIAD0441 439737 - 439982 + | hypothetical protein TERM 511 439980 - 440003 + F 71 -5.5 -4.51301 | opp_overlap 439980 439983, overlap 439996 439997 GCCTTGACCGAATCA TAATTTCAA ACTGAG TTGAAATTA TTTCGTTTTTTGTTC TERM 512 439996 - 440008 + F 76 -2.7 -5.5074 | opp_overlap 439983 439980, overlap 439980 439997 AATTTCAAACTGAGT TGAAA TTA TTTCG TTTTTTGTTCACTTA TERM 513 440640 - 440630 - g 74 -4.6 -4.78107 | overlap 440632 CATGATCAGTAAAAA GCGC AGT ACGC TCAAGTTACTGCAAG rluC 440160 - 441092 + | 23S rRNA pseudouridylate synthase ACIAD0443 441089 - 441754 + | putative phosphoglycolate phosphatase protein ACIAD0444 441801 - 442529 + | putative transcriptional regulator ACIAD0445 442581 - 443186 + | putative glutathione S-transferase TERM 514 443206 - 443225 + T 95 -8.6 -5.38326 | opp_overlap 443206 ATTTAAAGTGACGAA GGAAAGCG AAGA TGCTTTCC TTTTTATTTAATTGG ACIAD0446 443907 - 443233 - | hypothetical protein TERM 515 443311 - 443299 - G 80 -4.8 -5.13722 | GGTATTAAAACAAAA TGCC AGAAA GGCA TGGAAAATATTGAGC TERM 516 443375 - 443355 - G 80 -9.8 -3.65902 | opp_overlap 443349 GTGACGTGATTGAAA CATCAGCA GTTTG TGCTGATG TGCCAATGATGTAAC TERM 517 443814 - 443799 - G 70 -7.6 -3.67976 | TGGACCAATGCCAAA CTGTCA ACCA TGACAG TGAAAGGGCCATGAT hcaR 444924 - 444028 - | DNA-binding transcriptional regulator HcaR TERM 518 444440 - 444426 - G 70 -2.8 -4.9218 | TAGGCAGGATAAAAA TGAGTG GTT CACTTA ATACCAATTGACTAT TERM 519 445080 - 445061 - H 76 -4.4 -5.16969 | opp_overlap 445061 445065 445070, overlap 445070 GATATAAAAAATAAA TTCATGAA TTAA TTCATAAA TTAGTTTAATCAAAT TERM 520 445237 - 445225 - H 71 -3.4 -5.09259 | overlap 445210 CATTTTAAAATAAAA TAGC TTGAC GCTA TAACATATAAAGATG TERM 521 445706 - 445696 - g 85 -4 -5.51165 | AAAATTTTAAAAAAA TGAA AGG TTCA TTGGGCTATTTTGAA TERM 522 445884 - 445894 + G 78 -2.4 -5.4505 | ATTGGTGTTGTACTT GCTG TTT CTGC TTTTTTATTGGCACG ACIAD0449 445278 - 446255 + | putative cation transport protein TERM 523 446706 - 446716 + G 71 -8.2 -3.53012 | opp_overlap 446698 TCACCAAGGTCGTGG CCCG CGT CGGG TTTGCCCAGCAGGAA ACIAD0450 446311 - 447363 + | putative Zn-dependent hydrolase of the beta-lactamase fold TERM 524 447376 - 447411 + T 100 -20.8 -4.73682 | opp_overlap 447365 447387, overlap 447387 TAAAGCTTTTTGTTT GCAATAAAAAACCACC CGCA GGTGGTTTTTTATTGC TTTTCTATTATAAGA TERM 525 447387 - 447400 + T 93 -8.1 -5.61689 | opp_overlap 447387, overlap 447376 GTTTGCAATAAAAAA CCACC CGCA GGTGG TTTTTTATTGCTTTT TERM 526 447400 - 447387 - T 93 -8.1 -5.4505 | opp_overlap 447376 447387 GTTTGCAATAAAAAA CCACC CGCA GGTGG TTTTTTATTGCTTTT katA 448939 - 447419 - | catalase (hydroperoxidase II) TERM 527 449465 - 449453 - H 70 -4.1 -4.64861 | TGTTTGGAAAATAAA GATCA TCA TGACC TATGTGCCCAAAATT TERM 528 450868 - 450883 + G 86 -7.6 -4.72631 | GCAATACAGCGTCAT CCTGAA TCTA TTCAGG TTTTATTCGATTCAT ACIAD0452 449533 - 451179 + | putative acyl-CoA dehydrogenase (AidB) TERM 529 451197 - 451213 + T 100 -10.9 -4.46212 | opp_overlap 451197 TTTTCAATTAAAAAA GGGCAAA TGA TTTGCCC TTTTCTGATGAAGCC TERM 530 451213 - 451197 - T 100 -10.9 -5.26875 | opp_overlap 451197 TTTTCAATTAAAAAA GGGCAAA TGA TTTGCCC TTTTCTGATGAAGCC ptsP 453527 - 451233 - | phosphoenolpyruvate-protein phosphotransferase TERM 531 453580 - 453620 + r 76 -6.3 -4.51812 | opp_overlap 453576 453573 TGTTATAACAGCACT CGACCGAAAAATCATTT GCTAGAG AGATGATTTTTCGAACG TTTGTTGTTGTGGCA nudH 454098 - 453598 - | dinucleoside polyphosphate hydrolase ACIAD0456 454283 - 454933 + | haloacid dehalogenase-like family hydrolase ACIAD0457 455865 - 454936 - | putative transcriptional regulator ACIAD0459 456045 - 457100 + | putative vanillate O-demethylase oxygenase subunit ACIAD0460 459327 - 457207 - | hypothetical protein ACIAD0461 460446 - 459565 - | LysR family transcriptional regulator TERM 532 460478 - 460499 + r 70 -4.3 -4.78752 | opp_overlap 460478 460475 CTCAATGTAAAATAA GCGGGTATG AAGG CAAACCAGC TTTTTACATTGTAGT ACIAD0462 460810 - 460541 - | hypothetical protein leuC 461051 - 462484 + | isopropylmalate isomerase large subunit TERM 533 463039 - 463064 + G 71 -3.3 -5.05782 | opp_overlap 463046, overlap 463042 ACGATGCAGGCTTAT GTGGAAACATT TTAT AATGATTCTGC TTTTTTAGAATGGAT ACIAD0465 462484 - 463137 + | putative glutathione S-transferase TERM 534 463536 - 463524 - g 86 -7.7 -4.58283 | opp_overlap 463523 463535 CAACTGCTTTAAAAA TGGCA TGT TGCCA GTCATCTTGGATGAA TERM 535 463648 - 463637 - g 70 -5.8 -4.36127 | CTCAAGAAGTTAAAA CACC AACG GGTG AAGCATTCAAATTTG leuD 463156 - 463806 + | isopropylmalate isomerase small subunit ACIAD0468 463917 - 464489 + | hypothetical protein leuB 464538 - 465617 + | 3-isopropylmalate dehydrogenase TERM 536 465647 - 465671 + F 80 -5 -5.30189 | opp_overlap 465647 ACACCGATCTTAAAA GGAGATGCCT TGAAC AAGCATTTCC TTTTTTAATATTATA ACIAD0471 465820 - 466197 + | hypothetical protein TERM 537 466271 - 466256 - T 95 -9 -5.43866 | opp_overlap 466256 CAAGTCGTAAAAAAA GCCACT TCAG AGTGGC TTTTTTGCATTCGCT TERM 538 466256 - 466271 + T 95 -9 -5.16572 | opp_overlap 466256 CAAGTCGTAAAAAAA GCCACT TCAG AGTGGC TTTTTTGCATTCGCT infA 466516 - 466295 - | protein chain initiation factor IF-1 TERM 539 467714 - 467702 - g 70 -7.7 -3.6502 | overlap 467713 TACCGTGCATTTAAA CGTTG GAC CAACG AAACCCCTGTTGAGT ACIAD0473 466745 - 467752 + | AraC family transcriptional regulator TERM 540 467764 - 467779 + T 89 -7.6 -5.24531 | opp_overlap 467764 TTAAATGAAAAAAAA TGCATC GAAA GATGCA TTTTTTATAGAAGCT TERM 541 467779 - 467764 - T 100 -7.6 -6.02546 | opp_overlap 467764 TTAAATGAAAAAAAA TGCATC GAAA GATGCA TTTTTTATAGAAGCT truA 468625 - 467810 - | tRNA pseudouridine synthase A ACIAD0476 469609 - 468644 - | putative L-asparaginase I (AnsA) TERM 542 469636 - 469619 - R 88 -7 -4.93968 | opp_overlap 469619 ATTCATAACTAAAAA GCAGTC CAAACT GACTGC TTATGTTAGAACGAT ACIAD0477 470811 - 469657 - | hypothetical protein TERM 543 470780 - 470766 - G 80 -6.4 -4.91109 | GTCGTATTATAAAAA TGATCG CCA CGACCA ATAAAATAATAAATG TERM 544 471011 - 470993 - R 100 -10.3 -5.28176 | opp_overlap 470993 TCGATGCACAAAAAA GCCGATC ATCAA GATCGGC TTCATGACATCATTA TERM 545 470993 - 471011 + r 83 -10.3 -3.17688 | opp_overlap 470993 TCGATGCACAAAAAA GCCGATC ATCAA GATCGGC TTCATGACATCATTA asd 472155 - 471037 - | aspartate-semialdehyde dehydrogenase TERM 546 472079 - 472063 - G 73 -5.1 -4.73108 | overlap 472065 GGTAGAAAAGTAAAA TGGCTCA AAG TGAGCAA AATCATTTTCTTCAA TERM 547 472618 - 472597 - g 73 -2.9 -5.08824 | overlap 472609 TTCCTATGGAAAAAA CAGGTGGTA CAAG TTCGACCTG AACAGTCCAATAAAA ACIAD0480 472336 - 473457 + | hypothetical protein TERM 548 473670 - 473709 + F 100 -10.2 -4.79352 | gap 1, overlap 473676 TCGAAAGCACAACCT CATTTACCCGAGTTTTACA GGA TGTAGAACTCGGGTTG-TG TTTTATTCTAACTCA TERM 549 473676 - 473704 + F 100 -16.9 -4.11061 | overlap 473670 GCACAACCTCATTTA CCCGAGTTTTACA GGA TGTAGAACTCGGG TTGTGTTTTATTCTA TERM 550 473768 - 473756 - f 74 -3.4 -5.27709 | overlap 473760 473763 TCACAAAAAAATAAA GAGA TGACG TCTC TACCTGAAACGTACA TERM 551 474226 - 474244 + F 72 -6 -4.43859 | AGTTTTATGAACGAA CTATTTGC AAT GCAAGTGG TTTTCTCCCGTTCTA TERM 552 475209 - 475187 - g 70 -7.8 -3.6502 | TACGGTGCACCTAAA GCAATCACAA GTT TTGTGATTCC AACTGGTTATTCATT gltP 474293 - 475597 + | glutamate/aspartate:proton symporter TERM 553 475645 - 475626 - T 100 -12.2 -5.09225 | opp_overlap 475626 ACCTGATTCAAAAAA CAGGAAGC CAAA GCTTCCTG TTTTTTACTTTAAGT TERM 554 475626 - 475645 + T 100 -12.2 -5.38497 | opp_overlap 475626 ACCTGATTCAAAAAA CAGGAAGC CAAA GCTTCCTG TTTTTTACTTTAAGT ACIAD0482 476766 - 475660 - | putative glycosyltransferase TERM 555 475745 - 475726 - G 73 -8.6 -3.68244 | opp_overlap 475738 ATCATCAAGGCTAAA CTGCTGCA CAGG TGCAACAG GTTGCAGATTTTTAA htrB 477968 - 477033 - | lipid A biosynthesis lauroyl acyltransferase (heat shock protein B) TERM 556 478173 - 478146 - R 100 -14.4 -3.60296 | opp_overlap 478146, overlap 478133 478131 GATCTTTATTCTAAA GATGACCTATTT TTTA AAATAGGTCATC TTGTTGTCCATATAA TERM 557 478146 - 478173 + r 100 -14.4 -3.83568 | opp_overlap 478133 478131 478146 GATCTTTATTCTAAA GATGACCTATTT TTTA AAATAGGTCATC TTGTTGTCCATATAA ACIAD0485 479873 - 478191 - | putative gamma-glutamyltranspeptidase ACIAD0486 480791 - 480159 - | putative transporter protein TERM 558 480961 - 480979 + r 95 -8.8 -5.04356 | opp_overlap 480961 TATATTCTGAAAAAA GCCCCTTA ATT TCAGGGGC TTTTTCGTTATTTAA TERM 559 480979 - 480961 - R 95 -8.8 -5.04385 | opp_overlap 480961 TATATTCTGAAAAAA GCCCCTTA ATT TCAGGGGC TTTTTCGTTATTTAA uup 482931 - 481015 - | ABC transporter ATP-binding protein TERM 560 481274 - 481293 + g 90 -4.2 -5.63103 | overlap 481271 GCAGGTGTATTTGCT GCTTCAGC TTTG GCTTGAGC TTTTTTTACTTCAGA TERM 561 483118 - 483104 - g 70 -2.8 -5.0538 | GCGGATTTGAAAAAA CAAATG CAG CTTTTG TATCAACGTGTTGAA ACIAD0488 482954 - 483199 + | putative SlyX protein TERM 562 484020 - 484038 + G 70 -7.4 -3.75461 | opp_overlap 484015 TTTAAAAGAGCAGCA TGGACCAT CTG ATGGACCA TTTCCTCCAAGTTTG ACIAD0489 483253 - 484257 + | hypothetical protein TERM 563 484465 - 484482 + G 91 -6.3 -5.49568 | ATTTAGGGTTATGGG TCGCGAT TATT ATCGTGA TTTTTGTTTTGGGTT TERM 564 484628 - 484612 - g 72 -9.5 -3.18033 | overlap 484610 484602 CAGAATGGACCAAGA TTCCGAT GGC ATCGGAA AATCGTGCCAGTATG ACIAD0492 484428 - 484892 + | hypothetical protein TERM 565 484869 - 484892 + F 84 -6.8 -5.04601 | GAGATGAAATCGTAT TTACACAGTC TGGC GACTGTCTAA TTTTTAATTTATCCA TERM 566 486391 - 486381 - g 73 -5.4 -4.62471 | overlap 486365 486364 486383 CTCAAGCTTGAAAAA CTTG ACC CAAG TCAGCATTTTACCAA topA 484929 - 487574 + | DNA topoisomerase I TERM 567 487595 - 487615 + F 100 -15.5 -5.252 | opp_overlap 487595 TGATTCTATTAAAAA TGCCGACAC ATT GTGTCGGCA TTTTTTATGAAGCTA TERM 568 487615 - 487595 - f 100 -15.5 -4.7373 | opp_overlap 487595 TGATTCTATTAAAAA TGCCGACAC ATT GTGTCGGCA TTTTTTATGAAGCTA TERM 569 488208 - 488224 + G 70 -5.1 -4.45399 | ATTTTCAGGTATCCT CACCTTT GTT ACAGGTG TTTTGATCTTGATCT ACIAD0494 487795 - 488367 + | hypothetical protein TERM 570 490056 - 490078 + G 91 -12.8 -2.76225 | AGAGATTGAACGCTC TGGTGATCAG GAC CTGGTCACCA TCATTACCATTCATT ACIAD0495 488419 - 490437 + | putative ATP-dependent DNA helicase (PcrA) ACIAD0496 490496 - 490756 + | putative RNA-binding protein ACIAD0497 490749 - 491120 + | hypothetical protein TERM 571 491518 - 491529 + G 70 -5.8 -4.25458 | GTATTGCAGCAGATT GCCA AAGA TGGC TTTATTGCTGAACTT ACIAD0498 491239 - 491742 + | hypothetical protein TERM 572 491829 - 491850 + F 71 -8.7 -3.09896 | overlap 491818 491828 TGCAGGTGCCCTTTG CCACCATGT TGTA ACATGGAGG ATTTATGTCTATAGA ACIAD0499 491855 - 492133 + | hypothetical protein TERM 573 492163 - 492134 - T 86 -10.9 -3.20878 | opp_overlap 492141, overlap 492141 CAATATCTAAGCTAA TAAAAAAGCGTAC ATTT GTACGCTTTTTTG CAATTTTACAGAATT TERM 574 492156 - 492141 - T 95 -9 -5.5074 | opp_overlap 492141, overlap 492134 TAAGCTAATAAAAAA GCGTAC ATTT GTACGC TTTTTTGCAATTTTA TERM 575 492141 - 492156 + T 95 -9 -5.15117 | opp_overlap 492134 492141 TAAGCTAATAAAAAA GCGTAC ATTT GTACGC TTTTTTGCAATTTTA ACIAD0500 493913 - 492195 - | CPA2 family Na+/H+ antiporter TERM 576 492232 - 492265 + g 87 -8.3 -4.57581 | opp_overlap 492242, overlap 492242 TGTGCACGTTCAATC TGGCCTAAAATATGA TGAC TCATATTTTTCGCCA TTTCTTCTTTCGCAT TERM 577 492477 - 492503 + g 77 -3.5 -5.09895 | overlap 492478 TACACTTGGCTCGGT AGCTTCACCGC TTACT GCGGCGATGCC TTTTTTACGTAAGTC TERM 578 492790 - 492780 - G 74 -6.8 -4.31688 | AAGAGTAATTGAAAA CAGG GCG CCTG CCAGAATTAAATTCT TERM 579 494033 - 494016 - R 100 -9.9 -6.15259 | opp_overlap 494016 494032 GAATGCAAAAAAAAA CGACTTC TATT GAAGTCG TTTTTTTAAAGAATC TERM 580 494016 - 494033 + r 100 -9.9 -5.41143 | opp_overlap 494016, overlap 494032 GAATGCAAAAAAAAA CGACTTC TATT GAAGTCG TTTTTTTAAAGAATC rpmG 494209 - 494054 - | 50S ribosomal protein L33 TERM 581 494097 - 494107 + g 81 -4 -5.38497 | overlap 494103 ACGTGTTGACGGATT TTTG GAT CAAA TTTTTTGATTTCCAT rpmB 494458 - 494222 - | 50S ribosomal protein L28 TERM 582 494350 - 494325 - G 70 -5.5 -4.4727 | opp_overlap 494310 CGAAGACGTACAAAA CGTTTTTCGCT TTCT AACCAAAAACG GTGGTGATGCAGGTT TERM 583 494358 - 494380 + g 73 -9.8 -2.91144 | overlap 494357 CAAAAACGGTGGTGA TGCAGGTTCG GCT CGAACCGGCG CTTGGTTTTGTTGTT TERM 584 494618 - 494585 - R 71 -5.3 -4.59853 | gap 1, opp_overlap 494588 494605, overlap 494587 494607 CGAATTCGGTAAAAA CGCGGCATGATCCAGT GTA AC-AGATCATGCCTTG ATCAGGTTATCGTAG calB 496073 - 494625 - | coniferyl aldehyde dehydrogenase (CALDH) TERM 585 495124 - 495104 - G 80 -9.7 -3.65522 | opp_overlap 495102 GATTCACTTCAATAA CACGTGCAC CAT GTTCACGTG CATCATCTAAATAGC TERM 586 495839 - 495825 - G 74 -10 -3.08639 | opp_overlap 495824 495823 495818 495817 495825 AACATGCTCAAGACA GGTGAG TAA CTCACC AATTTTGGTTTCACC TERM 587 495825 - 495839 + g 71 -10 -2.5893 | opp_overlap 495825, overlap 495824 495823 495818 495817 AACATGCTCAAGACA GGTGAG TAA CTCACC AATTTTGGTTTCACC ACIAD0504 496193 - 496882 + | TetR family transcriptional regulator purU1 496943 - 497833 + | formyltetrahydrofolate deformylase TERM 588 497857 - 497874 + F 76 -2.7 -5.52986 | TCATTTACAGAAAAA GTATGTG GAGA TGCATAC TTTTTTTAGTCGAAT ACIAD0507 498143 - 498925 + | putative TonB ACIAD0508 498945 - 499568 + | putative biopolymer transport protein (ExbB) TERM 589 499733 - 499721 - g 72 -7.7 -3.80746 | overlap 499719 TTGCCAAAAACAACA GCTGA AAT TCAGC CACCACCACCGAAAG ACIAD0509 499568 - 499972 + | putative biopolymer transport protein (ExbD) TERM 590 500018 - 500001 - T 100 -9.9 -5.80364 | opp_overlap 500001 AGCGCAATAAAAAAA GCAACTC GATC GAGTTGC TTTTTTTTGTTCAGG TERM 591 500001 - 500018 + T 100 -9.9 -6.09888 | opp_overlap 500001 AGCGCAATAAAAAAA GCAACTC GATC GAGTTGC TTTTTTTTGTTCAGG msrA 500562 - 500029 - | methionine sulfoxide reductase A ACIAD0511 500996 - 500649 - | putative heat shock protein HslJ ACIAD0512 500971 - 501153 + | hypothetical protein ACIAD0513 502358 - 501300 - | hypothetical protein TERM 592 501775 - 501763 - G 91 -6.9 -5.54894 | AACTGACGAAAAAAA CCGCC TAT GGCAG AAAAGCTTTCATTTT TERM 593 502363 - 502383 + r 77 -5.5 -4.91852 | overlap 502373 ATATTATGCATCGCA GACAATC AGCTAGA GATTGTC TTTATTTTTGATAAC folA 502894 - 502385 - | dihydrofolate reductase thyA 503749 - 502907 - | thymidylate synthase ACIAD0516 504156 - 503860 - | hypothetical protein ACIAD0517 504646 - 504221 - | hypothetical protein TERM 594 504425 - 504396 - G 81 -9.5 -3.74872 | gap 1, overlap 504406 ATCCAGGTGAGTAAA CGATAAAGAAGCCC GGT AGGCTT-TTTATCG GAAAAATTCAACTTT TERM 595 504755 - 504729 - R 93 -11 -3.90092 | opp_overlap 504721, overlap 504718 AGAGTTAGATAAGAA GATGCCCTTT ATATCTA AAAGGGCATC TCAAAATCATTTGTG lgt 505583 - 504762 - | prolipoprotein diacylglyceryl transferase TERM 596 506149 - 506138 - g 73 -7.2 -4.14633 | overlap 506136 CATTGGGAAAAAACA GCGC ATTT GCGC AAAAGGTTTACTCAA ACIAD0519 505676 - 506452 + | hypothetical protein TERM 597 506482 - 506455 - T 100 -13.6 -4.70169 | TCAGATTCAATAAAA TGCCAAGTAAGT TAAA ACTCACTTGGCA CACACACTACACTTG ACIAD0520 508486 - 506501 - | putative phosphatase; putative alkaline phosphatase tatC 509425 - 508664 - | Sec-independent protein translocase protein TERM 598 509145 - 509135 - G 86 -6.8 -4.96996 | CTGAAATAAAATAAA TGGC ATG GCCA ACATCATGGCAACAC tatB 509880 - 509422 - | Sec-independent protein translocase protein tatA 510129 - 509893 - | Sec-independent protein translocase protein TERM 599 510190 - 510202 + H 77 -4.9 -5.09426 | opp_overlap 510195 TTTGGATTGCAGTTT TAAGA CAG TCTTA TTTTTTAAGATTGAA ACIAD0524 510266 - 511144 + | putative permease ACIAD0525 511253 - 511435 + | hypothetical protein ACIAD0526 512096 - 511425 - | hypothetical protein TERM 600 512113 - 512100 - R 100 -8.1 -5.77571 | opp_overlap 512100 ACTAAAAAACAAAAA GCACC CGAA GGTGC TTTAAAATTCAAAAA TERM 601 512100 - 512113 + r 73 -8.1 -3.66178 | opp_overlap 512100 ACTAAAAAACAAAAA GCACC CGAA GGTGC TTTAAAATTCAAAAA ACIAD0527 512718 - 512131 - | TPR repeat-containing protein metW 513311 - 512715 - | methionine biosynthesis protein metX 514471 - 513308 - | homoserine O-acetyltransferase TERM 602 514535 - 514511 - R 100 -15.9 -4.96523 | opp_overlap 514515 AAATCAATAATAAAA GAAAGGATACC ATA GGTATCCTTTC AAAAAGAGTCTTTTA TERM 603 514515 - 514531 + r 89 -10.9 -3.53563 | opp_overlap 514511 CAATAATAAAAGAAA GGATACC ATA GGTATCC TTTCAAAAAGAGTCT leuA 516254 - 514557 - | 2-isopropylmalate synthase TERM 604 515290 - 515309 + g 84 -10.8 -3.62597 | opp_overlap 515267 TATGGATGACGCGGA TGTACAGG TAAG CCTGTACA TTCTTCAACAGTCGC TERM 605 516699 - 516721 + r 77 -9.2 -3.28261 | opp_overlap 516699 516710, overlap 516690 516710 CTTACGCATTCAAAA TGTGGTCTAA ACC TCAGACCACA TTCGTATGAGGTTGT TERM 606 516721 - 516699 - R 100 -11.4 -4.19817 | opp_overlap 516690 516699 516710, overlap 516710 CTTACGCATTCAAAA TGTGGTCTAA ACC TCAGACCACA TTCGTATGAGGTTGT piuC 517388 - 516705 - | putative hydroxylase TERM 607 517450 - 517430 - R 100 -9.1 -5.28983 | opp_overlap 517430 TGGAAAATAGAAAAA TAGCCTCAA CAA TTGAAGCTA TTTTATATGGGTTTT TERM 608 517430 - 517450 + r 80 -6.9 -4.59984 | opp_overlap 517430 TGGAAAATAGAAAAA TAGCCTCAA CAA TTGAAGCTA TTTTATATGGGTTTT ACIAD0532 519722 - 517500 - | putative ferric siderophore receptor protein TERM 609 518833 - 518853 + g 70 -5.4 -4.57569 | GTACCAATGTGGTTT TCGCGTTT ATCAA AATCGCGA TTTTTCCAGCCGTAA TERM 610 519377 - 519367 - G 71 -8.2 -3.524 | TACCCACGGATATAA GGCG TAT CGCC AAACGGTGTACCGCC TERM 611 520081 - 520093 + G 76 -10.5 -2.98471 | overlap 520078 CGACTGAAGCGGTTT CGGGC GTT GCCCG TCGTTTAAATGTTTC TERM 612 520333 - 520306 - g 90 -4.3 -5.64873 | gap 1 TTCAACAAGAAAAAA TCAATGCTGTGG GTATG CCA-AACATTGA AAAAGTAGAACATAA tig 520056 - 521390 + | trigger factor TERM 613 521401 - 521429 + F 81 -9.8 -3.44876 | gap 1, opp_overlap 521408, overlap 521408 GTTAATTCTGGATCG TAAAAAA-GGCGC GTAA GCGCCTTTTTTTA TTGATGTTGTGATTT TERM 614 521408 - 521421 + F 100 -9.5 -5.85737 | opp_overlap 521408, overlap 521401 CTGGATCGTAAAAAA GGCGC GTAA GCGCC TTTTTTTATTGATGT TERM 615 521421 - 521408 - f 100 -9.5 -5.0538 | opp_overlap 521408 521401 CTGGATCGTAAAAAA GGCGC GTAA GCGCC TTTTTTTATTGATGT TERM 616 521976 - 521986 + G 74 -6.8 -4.30576 | overlap 521973 GTCATGATTCATCAG CCAC TGG GTGG TTTTCGTGGTCAGGC clpP 521583 - 522188 + | ATP-dependent Clp protease proteolytic subunit TERM 617 522611 - 522633 + G 73 -8.4 -3.61356 | TATTGGCACAGACGT TGGCGCGTCT ACT GGATGTGCCA TTTGCAATGGCTGAT clpX 522217 - 523527 + | ATP-dependent protease ATP-binding subunit TERM 618 523547 - 523572 + F 93 -6.1 -5.80364 | opp_overlap 523547 TCATTGGTCTGAAAA GCATGATTTGC CTCG GCATTTCATGC TTTTTTTATTGCAAT ACIAD0536 523674 - 524387 + | putative signal peptide ACIAD0537 525011 - 524448 - | putative signal peptide TERM 619 525131 - 525154 + r 75 -9.6 -2.53876 | opp_overlap 525136, overlap 525136 ACACTTTTGGGCAAA AAAAAGCGCC CGTA GGCGCTTTTA TCGCTTAAACTGCAG TERM 620 525149 - 525136 - R 100 -9.5 -5.75342 | opp_overlap 525131 525136 TTTGGGCAAAAAAAA GCGCC CGTA GGCGC TTTTATCGCTTAAAC TERM 621 525136 - 525149 + r 93 -9.5 -4.4715 | opp_overlap 525136, overlap 525131 TTTGGGCAAAAAAAA GCGCC CGTA GGCGC TTTTATCGCTTAAAC fumA 526685 - 525159 - | fumarate hydratase TERM 622 525511 - 525536 + g 74 -9.7 -3.16564 | TCCATACGCGTTGCT GTTGTTGGGCC AGCA GGTCCAACCAC TTCATCACCTACAGG TERM 623 525979 - 526006 + g 73 -2.8 -5.18371 | gap 1, overlap 525981 525986 525987 AGCGCATTCACTTTC TCGAAG-ATTTCG ATA CGAAGTTCTTCAA TTTTGTTTTCTGGCC ACIAD0539 526841 - 527455 + | putative methyltransferase TERM 624 527507 - 527469 - T 90 -12 -3.35639 | opp_overlap 527477, overlap 527477 AATACTGCCAATCAA TTTAAAAAGCCACTTG ATAGTGG CAAGTGGCTTTTTAGA GAGCGATTAAAAGCG TERM 625 527477 - 527499 + T 93 -9.2 -4.56775 | opp_overlap 527469 527477 CAATCAATTTAAAAA GCCACTTG ATAGTGG CAAGTGGC TTTTTAGAGAGCGAT TERM 626 527499 - 527477 - T 100 -9.2 -4.77896 | opp_overlap 527477, overlap 527469 CAATCAATTTAAAAA GCCACTTG ATAGTGG CAAGTGGC TTTTTAGAGAGCGAT pta 529686 - 527524 - | phosphate acetyltransferase TERM 627 527870 - 527883 + g 71 -6.7 -4.07868 | overlap 527861 TGTTTGGCAATTTCA GTTGC TTTG GCAAC TTTCTCTACATCTGC TERM 628 529638 - 529620 - G 70 -7.4 -3.9009 | AATCGAGTGCATAAA TCAGCCCA AGA CAGGCTGA AGTTAACCCGACACC TERM 629 529750 - 529723 - R 74 -9.3 -3.01791 | opp_overlap 529714 529727, overlap 529727 ATGTTGGTTTGAAGA TCAATGGCTAG GTAAAG CTAACCATTGA TTCAGACTTTTTTGC ack 530935 - 529730 - | acetate kinase (propionate kinase) TERM 630 529919 - 529932 + g 79 -6.7 -4.61482 | TTTAAAACCAAAGTG TGGCA AGTA TGCCA TTGTTTTTTCGCGAA TERM 631 532552 - 532574 + G 75 -10.6 -2.75343 | overlap 532551 GCTCGTGGTGCACTT TCATGTGCCA ACT TGGCGCATGG CTTTGCCAGTATGGA TERM 632 532961 - 532982 + G 78 -8.7 -3.90318 | overlap 532964 CCACCATTTTTGTAC CTGCTGGTC CAAT GACCAGTGG TTTGTCGAATGATGA edd 532423 - 534270 + | phosphogluconate dehydratase TERM 633 534670 - 534690 + G 71 -4.7 -4.58395 | ATTCAGGCAATTGAG CTTGGCTAT GAG ATTGTCAAG TTTTTCCCAGCTCAG eda 534304 - 534933 + | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxyphosphogluconate aldolase gntT 535118 - 536455 + | GntP family high-affinity gluconate permease gntK 536472 - 536984 + | thermoresistant gluconokinase (gluconate kinase) TERM 634 536978 - 536962 - f 75 -8.7 -3.38118 | opp_overlap 536961 AGAAGTTAGGCATAA GCAACAG TGT CTGTCGC GGTTAATCTCGTTTA ACIAD0546 537122 - 538762 + | putative NADP-dependent glyceraldehyde-3-phosphate dehydrogenase TERM 635 538798 - 538783 - T 100 -10.4 -5.69379 | opp_overlap 538783 AGAGAAGTAAAAAAA CCAGCC TTCG GGCTGG TTTCTGATGTGTAGG TERM 636 538783 - 538798 + T 93 -10.4 -4.04318 | opp_overlap 538783 AGAGAAGTAAAAAAA CCAGCC TTCG GGCTGG TTTCTGATGTGTAGG TERM 637 538865 - 538825 - T 100 -13.7 -3.65522 | gap 1, opp_overlap 538830 538835, overlap 538828 538830 538835 TAGGTATTTGAACAA TAATATAAAAGCGCCTGA GATTAA TCAGGCGCTTTTAT-TTA AAGTTATAAATTACT TERM 638 538863 - 538828 - T 100 -13.5 -3.96068 | opp_overlap 538830 538835, overlap 538825 538830 538835 GTATTTGAACAATAA TATAAAAGCGCCTGA GATTAA TCAGGCGCTTTTATT TAAAGTTATAAATTA TERM 639 538830 - 538861 + T 100 -16.1 -3.69621 | opp_overlap 538830 538828 538825 538835, overlap 538835 ATTTGAACAATAATA TAAAAGCGCCTGA GATTAA TCAGGCGCTTTTA TTTAAAGTTATAAAT TERM 640 538861 - 538830 - T 100 -16.1 -3.5672 | opp_overlap 538830 538835, overlap 538828 538825 538835 ATTTGAACAATAATA TAAAAGCGCCTGA GATTAA TCAGGCGCTTTTA TTTAAAGTTATAAAT TERM 641 538856 - 538835 - T 100 -11.6 -4.83518 | opp_overlap 538835 538830, overlap 538830 538828 538825 AACAATAATATAAAA GCGCCTGA GATTAA TCAGGCGC TTTTATTTAAAGTTA TERM 642 538835 - 538856 + T 100 -11.6 -4.90525 | opp_overlap 538830 538828 538825 538835, overlap 538830 AACAATAATATAAAA GCGCCTGA GATTAA TCAGGCGC TTTTATTTAAAGTTA proA 540153 - 538888 - | gamma-glutamyl phosphate reductase TERM 643 539380 - 539393 + g 82 -6.7 -4.75174 | opp_overlap 539379 CATGGCATTACATAC CCCAT AACG ATGGG TTTTTGCATTGAGTG TERM 644 539964 - 539976 + g 79 -6.9 -4.70659 | GGGCACTATCCAGAT GGCTG TCA CGGCC TTTTTGCATATCGAC TERM 645 541373 - 541393 + G 75 -10.5 -2.78992 | opp_overlap 541373, overlap 541372 TTTTTGAATCATCAA TCTATCCAG CAT CTGGATGGA ATTATTCCCATGACT ACIAD0549 540446 - 541780 + | putative hydrolase TERM 646 541788 - 541812 + T 81 -5.8 -4.90455 | opp_overlap 541782 541791, overlap 541791 TAGTATAAGCAAATA AAATAGCAAC GCTAA GTTGCTATTA TTTTTGTGCATGTAT TERM 647 541809 - 541791 - T 88 -7.5 -5.02357 | opp_overlap 541788 541791, overlap 541782 TATAAGCAAATAAAA TAGCAAC GCTAA GTTGCTA TTATTTTTGTGCATG TERM 648 541791 - 541809 + T 82 -7.5 -4.5448 | opp_overlap 541791 541782, overlap 541788 TATAAGCAAATAAAA TAGCAAC GCTAA GTTGCTA TTATTTTTGTGCATG ACIAD0550 542655 - 541810 - | hypothetical protein TERM 649 542735 - 542716 - R 86 -10.8 -3.21772 | opp_overlap 542715, overlap 542703 542714 AATTTCTGTAGAACA GGAAAGTG CGGA CACTTTCC ATCATGTTTTATCGC nagZ 543794 - 542775 - | beta-hexosaminidase TERM 650 544053 - 544077 + G 95 -2.8 -6.22802 | gap 1, overlap 544054 544055 TTCAAGTTATCGCAT GTGCC-GTTGC AGTT GCAACTGGCGG TTTTTTTTTCTCCCA TERM 651 544054 - 544076 + G 72 -6.3 -4.32054 | gap 1, overlap 544053 544055 TCAAGTTATCGCATG TGCC-GTTGC AGTT GCAACTGGCG GTTTTTTTTTCTCCC TERM 652 544409 - 544420 + G 73 -7.2 -4.13728 | GCACAATACCGCGCC CGCC TTAA GGCG TTTTACGAATATGTA prc 544031 - 546214 + | carboxy-terminal protease for penicillin-binding protein TERM 653 546263 - 546303 + F 100 -9.9 -4.77036 | TGTAAATTTTTCAAG GCCCGTTTTGTTCTG AGATGATTTGA TAGAACGAAACGGGC TTTTTAATGCTCGGG TERM 654 547032 - 547020 - g 71 -4.7 -4.62984 | opp_overlap 547020 547021, overlap 547021 TCAGGATACAGAAAA GGCGC TAC GCGCT TTTGGTGTGACCTGC TERM 655 547021 - 547031 + G 82 -8.2 -4.35116 | opp_overlap 547021 547020, overlap 547020 CAGGATACAGAAAAG GCGC TAC GCGC TTTTGGTGTGACCTG ACIAD0553 546397 - 547686 + | putative glycosyl transferase TERM 656 548105 - 548120 + G 70 -5.4 -4.43012 | opp_overlap 548096, overlap 548104 ACATTAGGTTACGTC CAACCG ATAT TGGTTG TTTTGATGTTGCCAT TERM 657 548243 - 548261 + G 71 -6.6 -4.12603 | TGTGGAATCGTATTC TGTGCGCC ATT GGCGGGCA TTGTTCTTTAATAAA ACIAD0554 547718 - 548272 + | putative phosphatidylglycerophosphatase B (PgpB) ACIAD0555 548326 - 548544 + | putative protein believed to be involved in assembly of Fe-S clusters ndk 548655 - 549086 + | nucleoside diphosphate kinase (NDK) (NDP kinase) (nucleoside-2-P kinase) TERM 658 549102 - 549129 + F 100 -12.2 -5.9218 | opp_overlap 549102 TTAAAAGCATTTAAA CCAGATAAGTGT TATT ATACTTATCTGG TTTTTTTATTCTCTC TERM 659 549129 - 549102 - f 83 -10 -3.76411 | opp_overlap 549102 TTAAAAGCATTTAAA CCAGATAAGTGT TATT ATACTTATCTGG TTTTTTTATTCTCTC TERM 660 550204 - 550192 - g 80 -4.9 -5.243 | overlap 550196 CAAATTATTAAAAAA TTTAC CAA GTAAA ATTAACTTGATTCCA TERM 661 550427 - 550415 - g 71 -3.3 -4.91473 | overlap 550416 CAATGGAAAAAGAAA GTTGC TGA GCGAC AAGAGATTATTCGCT ACIAD0557 549209 - 550453 + | putative Fe-S-cluster redox enzyme TERM 662 551128 - 551107 - g 71 -4.3 -4.83169 | opp_overlap 551106 551107, overlap 551108 AGTTGGGCAGAAAAA TCAGGGTGC GCGA GCACTCTGG ATTGGTATTCGTGTG pilF 550472 - 551272 + | type 4 fimbrial biogenesis protein ACIAD0560 551263 - 552045 + | hypothetical protein TERM 663 552368 - 552382 + G 73 -10 -3.02144 | overlap 552374 TGTTGCAGATTATGG CGCAGA TTG TCTGCG TATTAACCCAGGTAA ispG 552069 - 553184 + | 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase TERM 664 554192 - 554202 + G 71 -6.8 -4.08216 | GATGTGTTTTTAGTC GCAG AGT CTGC TTTTCAAGGACATGC hisS 553181 - 554473 + | histidyl-tRNA synthetase ACIAD0563 554505 - 555206 + | hypothetical protein ACIAD0564 555206 - 556360 + | PQQ repeat-containing protein TERM 665 556464 - 556474 + F 86 -8.2 -4.73864 | CCGTATTTTTATTTG GGCC TCT GGCC TTTTATCTTCCTTAA TERM 666 556911 - 556885 - g 95 -8.1 -5.09225 | AGCTTAGGTAAAAAA GTCTACCTCGT GGCCA ACAAAGTAGAC GGTGTTCATGCAGAA engA 556549 - 557958 + | GTP-binding protein EngA TERM 667 557974 - 557993 + F 100 -13.6 -5.26918 | opp_overlap 557967 TTACCAAATTGCTAA GCCCCGAA AATG TTCGGGGC TTTTTTATACACTGT TERM 668 558676 - 558688 + G 87 -6.3 -5.1286 | opp_overlap 558676 558675 AGCAAACTGATCAAC TCGAT GTC ATCGA TTTTTATCATTTTTG ACIAD0566 558138 - 558755 + | hypothetical protein TERM 669 559396 - 559382 - g 73 -2.8 -5.1971 | ACCAAAAACGAAAAA TGGTAT CAC ATTCCA TCAAAACCTTTTCAT ACIAD0567 558743 - 559540 + | putative acyltransferase ACIAD0568 559537 - 559797 + | putative acyl carrier protein ACIAD0569 559807 - 560052 + | acyl carrier protein TERM 670 560306 - 560316 + G 78 -5.4 -4.93968 | ATTGATGAGTTTAGG TGCA TTT TGCA TTTTTGCTTCTACAT ACIAD0570 560052 - 560618 + | hypothetical protein ACIAD0571 560611 - 562278 + | hypothetical protein ACIAD0572 562275 - 563012 + | putative glycosyl transferase (group 2 family protein) ACIAD0573 563015 - 563938 + | hypothetical protein hutH 563940 - 565523 + | histidine ammonia-lyase protein (Histidase) ACIAD0575 565513 - 565953 + | hypothetical protein ACIAD0576 566019 - 566606 + | hypothetical protein ACIAD0577 566608 - 568905 + | hypothetical protein TERM 671 570180 - 570162 - g 100 -8.2 -4.91712 | opp_overlap 570174, overlap 570172 TCCAATGCATAAAAA TGCCAAAC GAC GTTTAGCA ACGCTGGCTGAATAT ACIAD0578 568921 - 570237 + | putative oxidoreductase protein; putative dehydrogenase (flavoprotein) ACIAD0579 570239 - 570781 + | hypothetical protein TERM 672 571033 - 571007 - g 73 -8.6 -3.68341 | AACTTCATTGAACAA TTGCCTGAGCGC TGT GCGCCGTGGCAA TCCCGTAATTTACGC ACIAD0580 570788 - 572038 + | 3-oxoacyl-(acyl carrier protein) synthase I ACIAD0581 572035 - 572478 + | putative 3-hydroxylacyl-(acyl carrier protein) dehydratase fabG 572475 - 573200 + | 3-ketoacyl-(acyl-carrier-protein) reductase fabF 573200 - 574423 + | 3-oxoacyl-(acyl carrier protein) synthase II TERM 673 574663 - 574651 - g 88 -3.4 -5.84381 | TCACCAATAAAAAAA CCAA TGGCT TTGG TAAGTCGGCAGAAAA ACIAD0584 574437 - 574871 + | hypothetical protein ACIAD0585 574893 - 575549 + | putative holo-(acyl carrier protein) synthase 2 (AcpT) (phophopantetheinyltransferase) ACIAD0586 575585 - 575857 + | hypothetical protein TERM 674 575876 - 575894 + T 100 -13.2 -4.19704 | opp_overlap 575876 TGTTGATTAAAAAAA TGCCAGCA GAT TGCTGGCA TTTTGAATAACATTC TERM 675 575894 - 575876 - T 100 -13.2 -5.52384 | opp_overlap 575876 TGTTGATTAAAAAAA TGCCAGCA GAT TGCTGGCA TTTTGAATAACATTC secF 576889 - 575921 - | preprotein translocase subunit SecF TERM 676 576360 - 576337 - G 84 -9.7 -3.90241 | CACCAATGATAATAA TGATGTCGT GAAATA ACGACATCA CGGCGCCCATCGCAA secD 578799 - 576898 - | preprotein translocase subunit SecD TERM 677 577132 - 577114 - G 75 -10.2 -2.83164 | opp_overlap 577117, overlap 577126 GTAGGCACGATCATA GCCGGCCA CAA TGGCCTGC TTGGGCGAAGCCCCC TERM 678 578820 - 578846 + r 81 -5.8 -4.86621 | opp_overlap 578824, overlap 578822 578824 TTCTTCTTAAAATGA AAAAGTCGTGCG GGG TGCACGACTGTC TTTTTGATTAAAGGT TERM 679 578822 - 578844 + r 79 -8.4 -4.05402 | opp_overlap 578824, overlap 578820 578824 CTTCTTAAAATGAAA AAGTCGTGCG GGG TGCACGACTG TCTTTTTGATTAAAG TERM 680 578842 - 578824 - R 100 -10.3 -5.0925 | opp_overlap 578822 578820 578824 TCTTAAAATGAAAAA GTCGTGC GGGGT GCACGAC TGTCTTTTTGATTAA TERM 681 578824 - 578842 + r 89 -11 -3.61182 | opp_overlap 578824, overlap 578822 578820 TCTTAAAATGAAAAA GTCGTGCG GGG TGCACGAC TGTCTTTTTGATTAA ACIAD0589 579183 - 578854 - | IISP family preprotein translocase tgt 580416 - 579286 - | queuine tRNA-ribosyltransferase TERM 682 580084 - 580098 + g 79 -8.6 -4.21465 | GTCAATCGGTGAGCG GAAGGT CAC ACCTTC TTCTTTGATTTTACG TERM 683 580653 - 580614 - R 71 -8.7 -3.07816 | CCTTGATTCATTCAA TTTCGGGCAGATCGGAT AACCAA ATCCGATCTGACTAAAA GACATCAGATTTTCA queA 581769 - 580735 - | S-adenosylmethionine:tRNA ribosyltransferase-isomerase (queuosine biosynthesis protein ) TERM 684 581823 - 581833 + H 83 -2.4 -5.7946 | CTTTTCAAAGTGATT GGGC AGC GACC TTTTTTTATTGAAAC TERM 685 582063 - 582089 + H 100 -6.7 -6.07374 | gap 1, opp_overlap 582063 TACAGAATTCTAGAA CCCTGAAACTAT ATGA AT-GTTTCGGGG TTTTTTATTTTTTAT ACIAD0593 582628 - 582846 + | hypothetical protein TERM 686 582872 - 582910 + F 82 -10 -3.56727 | gap 1, opp_overlap 582860 582880, overlap 582880 TAATTTTTCAACTTT TAGAAAAACCACTTTGA TTTGGC TCAAAGTGGTTTTT-TA TTATGATTCATTGAG TERM 687 582903 - 582880 - f 100 -9.7 -4.8543 | opp_overlap 582872 582880 CAACTTTTAGAAAAA CCACTTTGA TTTGGC TCAAAGTGG TTTTTTATTATGATT TERM 688 582880 - 582903 + F 100 -9.7 -5.59534 | opp_overlap 582880, overlap 582872 CAACTTTTAGAAAAA CCACTTTGA TTTGGC TCAAAGTGG TTTTTTATTATGATT TERM 689 583902 - 583892 - g 70 -2.6 -5.06451 | GACCATCGTAAAAAA TATT CTA AATA CCTTTGCCCTGAAAA ACIAD0595 583098 - 584363 + | putative sensory transduction histidine kinase TERM 690 584608 - 584590 - g 73 -6 -4.5528 | GAAAATGAATTAAAA GACATTCA GGA TGAAAGTC AGTGGATGCGAGTAG TERM 691 584680 - 584696 + G 83 -10.9 -3.53091 | opp_overlap 584680 CAAGATGCCAATCGA CTCACCA ATG TGGTGAG TTTGACGCGAGAGCT TERM 692 584696 - 584680 - g 76 -10.9 -2.55 | opp_overlap 584680 CAAGATGCCAATCGA CTCACCA ATG TGGTGAG TTTGACGCGAGAGCT glnE 584401 - 587175 + | glutamine synthetase adenylyltransferase TERM 693 587432 - 587404 - g 79 -6.9 -4.60924 | overlap 587382 587408 TAAACTCTGCAAAAA TTTATCAAATGAA AGT TCCATTTGATCAA GCGACACTTGAGCAA ilvE 587193 - 588128 + | branched-chain amino acid aminotransferase TERM 694 588148 - 588167 + F 100 -12.2 -5.54885 | opp_overlap 588148 ATCCGTTAAGATCAA GGCGAAAC ACAT GTTTCGCC TTTTTTATTGATGTT TERM 695 588167 - 588148 - f 90 -12.2 -3.36452 | opp_overlap 588148 ATCCGTTAAGATCAA GGCGAAAC ACAT GTTTCGCC TTTTTTATTGATGTT ACIAD0598 588175 - 589083 + | hypothetical protein TERM 696 589263 - 589253 - g 91 -6.8 -5.46698 | TTTAAAACCAAAAAA CTCG GTG CGAG TTGGGCCAACAAAGA ACIAD0599 589088 - 590116 + | hypothetical protein ACIAD0600 590113 - 590868 + | putative polysaccharide deacetylase TERM 697 591087 - 591070 - g 74 -4.1 -5.00884 | opp_overlap 591061, overlap 591071 ATGCGGGTCAAAAAA GTTTGGC TTTA GCCAAAT GTCGCAATGATTGGG TERM 698 591086 - 591071 - g 70 -7.6 -3.60048 | opp_overlap 591061, overlap 591070 TGCGGGTCAAAAAAG TTTGGC TTTA GCCAAA TGTCGCAATGATTGG ACIAD0601 590865 - 591632 + | putative lipopolysaccharide core biosynthesis glycosyl transferase LpsC ACIAD0602 591638 - 592678 + | putative glycosyltransferase ACIAD0603 593563 - 592679 - | hypothetical protein TERM 699 593526 - 593539 + g 78 -5.3 -5.00616 | TCTTGTTTTTTTTGT TGGTA TTTG TACCA TTTTTTGGCAAGCGA ACIAD0604 593638 - 594396 + | putative glycosyltransferase involved in LPS biosynthesis ACIAD0605 594486 - 595325 + | putative glycosyl transferase ACIAD0606 595319 - 596098 + | hypothetical protein ACIAD0607 596884 - 596126 - | hypothetical protein ACIAD0608 597140 - 596922 - | hypothetical protein TERM 700 597030 - 597017 - G 78 -5.3 -4.95547 | opp_overlap 597015 CGCAGAATAATAAAA TACGT TGAT ACGTA TCTAAATTAAAAAGT TERM 701 597247 - 597264 + r 79 -5.5 -5.13521 | opp_overlap 597247 TTAAAATGCAAAAAA GCCAGCA TATC TGCTAGC TTTTTTAGGTACTTT TERM 702 597264 - 597247 - R 89 -7.7 -5.2696 | opp_overlap 597247 TTAAAATGCAAAAAA GCCAGCA TATC TGCTAGC TTTTTTAGGTACTTT aspS 599127 - 597289 - | aspartyl-tRNA synthetase ACIAD0610 599993 - 599217 - | hypothetical protein ACIAD0611 600145 - 602226 + | putative TonB-dependent receptor protein TERM 703 602251 - 602283 + F 100 -13.5 -3.6608 | overlap 602254 GCAATTAACAATGTT TTACGTGGAGTACCC TAT GGGTACTCTGCGTGG TTTAAGTGAACTGCT TERM 704 602254 - 602280 + F 100 -15.2 -2.94322 | overlap 602251 ATTAACAATGTTTTA CGTGGAGTACCC TAT GGGTACTCTGCG TGGTTTAAGTGAACT TERM 705 603837 - 603825 - g 76 -7.7 -4.18351 | AAACCAAATTACAAA CTGTC TTT GACAG GCTCTCATCAGGAAC ACIAD0612 602436 - 604517 + | putative TonB-dependent receptor protein TERM 706 604542 - 604559 + F 100 -9.9 -4.38116 | GTTGGAAACTATGCA GGAAAGC TTCG GCTTTCC TTTGGTTTTTATAGG TERM 707 604945 - 604931 - g 71 -4.2 -4.90266 | opp_overlap 604931 TTCATCAAGCAAAAA CCACCA TTG TGCTGG ATATGTTTTTGTTTA ACIAD0613 604645 - 606123 + | hypothetical protein ACIAD0614 606349 - 606176 - | hypothetical protein ACIAD0615 606821 - 606357 - | hypothetical protein ACIAD0616 606954 - 607445 + | hypothetical protein ACIAD0618 607570 - 607917 + | hypothetical protein TERM 708 607938 - 607960 + F 100 -10.7 -5.24531 | TCGATTTCTCACTCA TCCCATTCT TGATC AGAATGGGA TTTTTTATGCCAGAT ACIAD0620 608149 - 608586 + | hypothetical protein TERM 709 608631 - 608670 + T 70 -7.2 -3.81516 | gap 1 CTTATGCCAATTCAT CATCTTCTGG-GCGAGGTG TTT TACCTTGCTCTAGAGGACG TTCTTGATGCTTTTC ACIAD0621 609111 - 608617 - | hypothetical protein ACIAD0622 609257 - 609883 + | putative transcriptional regulator TERM 710 609905 - 609888 - T 100 -9.1 -5.64421 | opp_overlap 609888 609889, overlap 609889 ATCCTAAATAAAAAA CGCCTGC ATAA GCAGGCA TTTTTTTATTTGCGG TERM 711 609888 - 609905 + T 100 -6.9 -5.95539 | opp_overlap 609888 609889, overlap 609889 ATCCTAAATAAAAAA CGCCTGC ATAA GCAGGCA TTTTTTTATTTGCGG TERM 712 609889 - 609904 + T 100 -10.4 -4.15696 | opp_overlap 609888 609889, overlap 609888 TCCTAAATAAAAAAC GCCTGC ATAA GCAGGC ATTTTTTTATTTGCG TERM 713 609904 - 609889 - T 93 -10.4 -3.97026 | opp_overlap 609889 609888, overlap 609888 TCCTAAATAAAAAAC GCCTGC ATAA GCAGGC ATTTTTTTATTTGCG acdA 611715 - 609925 - | acyl-CoA dehydrogenase TERM 714 611815 - 611837 + r 73 -7.1 -4.07868 | gap 1, opp_overlap 611815 GATTTTATAAAAAAA GGACTG-TCA AAAC TGATCAGTCC TTTCTCTGACTATCA TERM 715 611837 - 611815 - R 93 -7.1 -5.626 | gap 1, opp_overlap 611815 GATTTTATAAAAAAA GGACTG-TCA AAAC TGATCAGTCC TTTCTCTGACTATCA acdB 613755 - 611878 - | acyl-CoA dehydrogenase TERM 716 613009 - 612999 - G 73 -5.4 -4.70887 | CGATGAATAAAGAAA TACC TTT GGTA CCTTTTGGGGCACCT TERM 717 613955 - 613942 - R 89 -6.7 -5.71712 | opp_overlap 613942 GTGTATATAAAAAAA GGTAC CGAA GTACC TTAATATTTTAATGA ACIAD0625 614296 - 613979 - | hypothetical protein TERM 718 615226 - 615236 + G 80 -2.6 -5.52384 | GATGAAGATGATGCC TTAA GTA TTAA TTTTTTTAGTAACCA baeS 614467 - 616164 + | kinase sensor component of a two component signal transduction system baeR 616168 - 616854 + | OmpR family transcriptional regulator TERM 719 616882 - 616900 + T 95 -8.8 -5.60689 | opp_overlap 616882 ATTTGGCTTAATTAA GCATCGCT ATA GGCGGTGC TTTTTTATTGTATAA ACIAD0628 617400 - 616954 - | hypothetical protein TERM 720 617308 - 617319 + g 78 -4.4 -5.22289 | TAGCTTTAATGCAGT TTGG ATAG CCAA TTTTTGTATTTGCTC ACIAD0629 618982 - 617510 - | hypothetical protein TERM 721 619018 - 619002 - R 93 -7.2 -5.69793 | opp_overlap 619002 ATAGCAAATAAAAAA GCCCCC TGAGC GGGAGC TTTGTATAATCACTT ACIAD0630 620208 - 619039 - | putative fatty acid desaturase TERM 722 620246 - 620230 - H 72 -9.5 -2.57344 | overlap 620229 CAGCGCTCCTAGAAC CCTTTGT CCG ACAAAGG TTAAAAACAAAACAG ACIAD0631 620456 - 620959 + | hypothetical protein TERM 723 620995 - 620952 - T 100 -13.4 -4.15841 | opp_overlap 620961 620965, overlap 620957 TGATCAAAGCACAAA GAAAATAAAGATAGGCAGGA GCTC TCCTGCCTTTCTTCATTTTA GCTGTTGTTGCATTA TERM 724 620990 - 620957 - T 100 -13.3 -5.06089 | opp_overlap 620961 620965, overlap 620952 AAAGCACAAAGAAAA TAAAGATAGGCAGGA GCTC TCCTGCCTTTCTTCA TTTTAGCTGTTGTTG TERM 725 620961 - 620986 + T 91 -11.9 -3.71279 | opp_overlap 620957 620952, overlap 620965 CACAAAGAAAATAAA GATAGGCAGGA GCTC TCCTGCCTTTC TTCATTTTAGCTGTT TERM 726 620965 - 620982 + T 100 -11.3 -4.45765 | opp_overlap 620957 620952, overlap 620961 AAGAAAATAAAGATA GGCAGGA GCTC TCCTGCC TTTCTTCATTTTAGC ACIAD0632 621704 - 620988 - | putative glycerophosphodiester phosphodiesterase ACIAD0633 622322 - 621744 - | hypothetical protein TERM 727 622390 - 622364 - R 90 -3.8 -5.8187 | GATGCAATAAAAAAA GGGTAATATC GGTCAAG AACATTACCC TGAAAATGGAGTTAA btuB 624327 - 622432 - | vitamin B12 receptor precursor TERM 728 623633 - 623653 + g 82 -3.4 -5.48213 | gap 1, overlap 623637 GCATGATAGCCTTTT TGATCAAAG CCTG CTTTG-TCA TTTTTATTTTGACTA trpF 624670 - 625344 + | N-(5'-phosphoribosyl)anthranilate isomerase (PRAI) TERM 729 626271 - 626253 - g 70 -8.1 -3.70149 | opp_overlap 626251 626269, overlap 626247 GTCAGATTATCGAAA CCCACAG TATTT CTGCGGG TCTGGATTACCCTGG trpB 625346 - 626557 + | tryptophan synthase subunit beta TERM 730 626605 - 626584 - f 77 -8.7 -3.5764 | opp_overlap 626584 AACGTGATGTGGAAA TGGGCAACA TCAA TGTGGCCCA TTTTTTTGGAGAAAG TERM 731 626584 - 626605 + F 95 -8.7 -5.40072 | opp_overlap 626584 AACGTGATGTGGAAA TGGGCAACA TCAA TGTGGCCCA TTTTTTTGGAGAAAG ACIAD0638 626627 - 627154 + | hypothetical protein ACIAD0639 627198 - 628238 + | hypothetical protein TERM 732 628278 - 628260 - T 75 -8.9 -3.42699 | ACTGAGTGATGACAA GCTGGTT TTAAT AACCAGC TTCCCAGAATGCCTG ACIAD0640 629142 - 628267 - | hypothetical protein ACIAD0641 629208 - 630293 + | putative transcriptional regulator TERM 733 630554 - 630543 - f 82 -3 -5.64274 | TCATTGAGAAAAAAA TCAA AATA TTGA TAAATGTACGCCATG TERM 734 631496 - 631510 + G 71 -10 -2.58892 | opp_overlap 631493 TAAAGTCAAGGAGCT TCGAGC AGC GCTCGA TGAGTTAGTATGAAT trpA 630720 - 631523 + | tryptophan synthase subunit alpha TERM 735 632320 - 632348 + G 70 -7.5 -3.75738 | opp_overlap 632320 CCAGCGTGCCGAATA TTTGCTTGATCAC GGT GTGGTCGATCAAA TTGTTCATCGTCATG accD 631520 - 632416 + | acetylCoA carboxylase, beta subunit folC 632413 - 633699 + | bifunctional folylpolyglutamate synthase (FPGS)/dihydrofolate synthase TERM 736 633921 - 633905 - g 89 -7.3 -4.94992 | TGAAACTGAGAAAAA GTTACTC GAA GAGCAAC GCCGTGCACGTGAGA ACIAD0645 633696 - 634685 + | hypothetical protein TERM 737 634749 - 634776 + T 100 -10.1 -5.0916 | opp_overlap 634751 634753 TGTATCATTTTTAAG TAGACCAATAT CTCAGC ATATTGGTCTA TTTTTATATTCAACA TERM 738 634823 - 634802 - T 77 -6 -4.70626 | CAACAATCCCAAAAA CTGAAAAA AGTAAA TTTTTCAG CTAAATAAAATTATA ACIAD0646 635698 - 634874 - | hypothetical protein TERM 739 635650 - 635611 - G 73 -8.6 -3.65671 | gap 1, overlap 635604 635613 GACAATGACATACAA TATGCGCACGCCAGCCATT TTG ACCGACTAGCG-GCGCACA AACGGGGCACATGCT TERM 740 635648 - 635613 - G 71 -9 -3.39727 | gap 1, overlap 635604 635611 CAATGACATACAATA TGCGCACGCCAGCCATT TTG ACCGACTAGCG-GCGCA CAAACGGGGCACATG TERM 741 635791 - 635809 + r 75 -8.9 -3.4758 | opp_overlap 635791, overlap 635787 TATAAAAAGGAAAAA GCCTATC AGATG GATAGGC TTGCTGTTATTCGTC TERM 742 635809 - 635791 - R 95 -8.9 -5.2197 | opp_overlap 635791 635787 TATAAAAAGGAAAAA GCCTATC AGATG GATAGGC TTGCTGTTATTCGTC ACIAD0647 636489 - 635833 - | putative antioxidant protein TERM 743 636870 - 636857 - g 75 -3.1 -5.24129 | CTTCGGTACAAAAAA TGAGC GCGA ACTCA AACGCATGCGTAAAA TERM 744 637009 - 636984 - g 86 -9.1 -4.33248 | opp_overlap 636979 636989 636991 GAACGTTATAATAAA GGTGAGAGTTT GGAT AAACTCTTACC TGAAGCTTTTGCTGT TERM 745 637980 - 637965 - g 100 -7.6 -5.36441 | CGTTTATACAAAAAA CTGTCA GGTA TGACAG GTACAGCAGATACAG secA 636816 - 639533 + | preprotein translocase subunit SecA TERM 746 639579 - 639560 - f 88 -7.9 -5.1925 | opp_overlap 639560 CTATAACTGAAAAAA GCAGAAC GTAAAT GTTCTGC TTTTTTTATGACTTT TERM 747 639560 - 639579 + F 95 -8.6 -5.68039 | opp_overlap 639560 CTATAACTGAAAAAA GCAGAACG TAAA TGTTCTGC TTTTTTTATGACTTT ACIAD0649 639688 - 640044 + | hypothetical protein TERM 748 640064 - 640082 + F 93 -7.4 -5.72622 | GTAGCAGAGCATTTG GCCAGC CATTTGT GCTGGC TTTTTTATTTGTAAA argJ 640190 - 641410 + | bifunctional ornithine acetyltransferase/N-acetylglutamate synthase protein TERM 749 641428 - 641441 + F 100 -6.7 -6.17292 | opp_overlap 641428 GATGACGATAAAAAA CCTCA TTCG TGAGG TTTTTTTTTAAATTT TERM 750 641441 - 641428 - f 85 -6.7 -5.32882 | opp_overlap 641428 GATGACGATAAAAAA CCTCA TTCG TGAGG TTTTTTTTTAAATTT nadA 641548 - 642612 + | quinolinate synthetase TERM 751 642720 - 642698 - T 77 -10.6 -2.57132 | overlap 642697 642701 CGTCCCGCCTAGAAT GCACACCGTA CCG CACGATGTGC GATACGGTAAAAGCT TERM 752 642729 - 642701 - T 100 -16.1 -2.59431 | overlap 642698 642697 CCCGCCTAGAATGCA CACCGTACCGCAC GAT GTGCGATACGGTA AAAGCTGAGAAGACG TERM 753 642850 - 642861 + T 74 -3 -5.31877 | TAAGATCGGCGGAAG TATC GCAT GATA TTTTTTATCATCGGT TERM 754 643191 - 643204 + T 86 -5.2 -5.64274 | opp_overlap 643191 AAAAAAATCCGAAAT CCGC TTAAAT GCGG TTTTTTTATGCCTAA TERM 755 643267 - 643240 - T 100 -10.1 -5.24531 | opp_overlap 643240 643246, overlap 643221 ATTTTTTATAAAAAA TAGAAAGATTC ACAACA GAATCTTTCTA TTTCCTGTAACCATC TERM 756 643240 - 643267 + T 83 -10.1 -3.83502 | opp_overlap 643221 643240, overlap 643246 ATTTTTTATAAAAAA TAGAAAGATTC ACAACA GAATCTTTCTA TTTCCTGTAACCATC ACIAD0653 643769 - 643290 - | putative lipoprotein precursor ACIAD0654 645004 - 643787 - | hypothetical protein ACIAD0655 645481 - 645011 - | hypothetical protein TERM 757 645725 - 645710 - H 81 -6.2 -4.99035 | opp_overlap 645709 TGATGCAGATAAAAA CTTGTT GATA AACAAG GGTTTGGCTAGATTG TERM 758 647553 - 647534 - H 72 -9.2 -2.65808 | opp_overlap 647540, overlap 647531 AGTCGTAACAAGGTA GCCGTAGG GGAA CCTGCGGC TGGATCACCTCCTTA TERM 759 647672 - 647656 - H 81 -10.9 -2.62396 | overlap 647658 647669 CAGTTGGTTAGAGCA CACGCTT GAT AAGCGTG GGGTCACAAGTTCAA TERM 760 647847 - 647831 - H 72 -9.5 -2.7676 | opp_overlap 647844 CAAATTTCAAGAGCA GAAAAGC AAC GCTTTTC CTTGAAATTTAAGCA TERM 761 647951 - 647966 + H 73 -7.6 -3.8766 | overlap 647916 AAAGTTTATTAACCT CTGTGA TTTA TCACAG TTTAGTGTGATCTGA TERM 762 648738 - 648726 - H 89 -9.1 -4.2354 | GAAAGGCGAAAAGAA CCCCT GTG AGGGG AGTGAAATAGATCCT TERM 763 649530 - 649516 - H 80 -7.1 -4.56607 | overlap 649508 TGAGTAACGACAAAA CGGGT GAAAA ACCCG TTCGCCGAAAGACCA TERM 764 651493 - 651459 - H 100 -14.4 -3.35597 | opp_overlap 651464, overlap 651464 GCCAGCTTTTAAATA TAAAAGCCCCCTGAAT CAA AATCAGGGGGCTTTTT TTATGTAGAAAATAA TERM 765 651464 - 651488 + H 100 -14.3 -5.71712 | opp_overlap 651459 651464 CTTTTAAATATAAAA GCCCCCTGAAT CAA AATCAGGGGGC TTTTTTTATGTAGAA TERM 766 651488 - 651464 - H 100 -14.3 -4.78848 | opp_overlap 651464, overlap 651459 CTTTTAAATATAAAA GCCCCCTGAAT CAA AATCAGGGGGC TTTTTTTATGTAGAA rpoN 651692 - 653140 + | RNA polymerase factor sigma-54 TERM 767 653165 - 653190 + F 100 -8.5 -5.86061 | opp_overlap 653167 TCTGTCTATTCTAGA GATTCATTGTT GCAA AATAATGAATC TTTTTTTTCATCGAA ACIAD0658 653294 - 653647 + | putative sigma(54) modulation protein RpoX TERM 768 653682 - 653664 - f 77 -8.9 -3.57144 | opp_overlap 653664 TTTTTGATCTTTAAA GAGGCTA GAGAT TAGCCTC TTTTTTTATGTATAA TERM 769 653664 - 653682 + F 100 -9.6 -5.76633 | opp_overlap 653664 TTTTTGATCTTTAAA GAGGCTAG AGA TTAGCCTC TTTTTTTATGTATAA ACIAD0659 653725 - 654033 + | putative toluene tolerance protein Ttg2F TERM 770 654321 - 654308 - g 82 -6.7 -4.81685 | opp_overlap 654307 654308 ATGAATTAGTAAAAA CGATG CGTG CATCG ATTTTAGTGCTCGGG TERM 771 654930 - 654904 - g 75 -8.8 -3.5882 | overlap 654905 GATATGATGGGCAAA CGTCCTAAAGCT GTA AGTTTTAGGACA TTACCGCATCCAGAA TERM 772 654929 - 654905 - g 72 -10.1 -2.7497 | overlap 654904 ATATGATGGGCAAAC GTCCTAAAGCT GTA AGTTTTAGGAC ATTACCGCATCCAGA murA 654040 - 655296 + | UDP-N-acetylglucosamine 1-carboxyvinyltransferase hisG 655293 - 655979 + | ATP phosphoribosyltransferase catalytic subunit TERM 773 656016 - 656032 + F 100 -9.4 -5.37345 | opp_overlap 656016 TATTTTATTCAAGAA CCGCCA TATTC TGGCGG TTTTTTGTCATTGGA TERM 774 656032 - 656016 - f 80 -9.4 -3.68073 | opp_overlap 656016 TATTTTATTCAAGAA CCGCCA TATTC TGGCGG TTTTTTGTCATTGGA TERM 775 656537 - 656555 + G 71 -6.7 -4.08216 | AAGCCCTTGAATTGG CTGCGGA GCGTA TTCGCAG TTTTCACCAAGCTCA hisD 656263 - 657555 + | histidinol dehydrogenase TERM 776 657600 - 657616 + F 100 -12.3 -5.03314 | overlap 657592 AGTAACTGCTCTACG GGGCTGA TTT TCAGCCC TTTTTTGAGAATAGA hisC 657635 - 658720 + | histidinol-phosphate aminotransferase pabB 660027 - 658717 - | p-aminobenzoate synthetase TERM 777 660864 - 660836 - g 73 -9 -3.55444 | overlap 660857 CTTTCACTGGGTAAA GTTGCAGCTAAT ATTCA ATTAGGTGCAAC CCCTCAAGGTGCCAT ACIAD0666 660329 - 661195 + | hypothetical protein TERM 778 661221 - 661237 + F 100 -9.4 -5.14563 | opp_overlap 661221 TGTGAATTTAAAAAA CGCGTG TTCGT CACGCG TTTTTTAATGACCAA TERM 779 661237 - 661221 - f 100 -9.4 -5.15969 | opp_overlap 661221 TGTGAATTTAAAAAA CGCGTG TTCGT CACGCG TTTTTTAATGACCAA TERM 780 661779 - 661765 - g 76 -10 -3.272 | ACTACTCGATATGAA GCGGTT TGT AACCGC ATTAGGACTAGAAAG ACIAD0667 661508 - 662242 + | putative peptidase ACIAD0668 662264 - 663454 + | putative signal peptide ACIAD0669 663469 - 665133 + | long-chain fatty acid ABC transporter ACIAD0671 665409 - 666356 + | hypothetical protein TERM 781 666356 - 666339 - f 95 -8.5 -5.04733 | CAAGGACAAATAAAA TTAACGG CTAT CCGTTAA AATAAGTAGGATATC TERM 782 666945 - 666929 - g 73 -3.8 -4.98436 | opp_overlap 666938 666943 TGAAGATTATAAAAA TGATTT ATCTA AAATCA CTCGTTCGTTGACGG TERM 783 667360 - 667345 - g 71 -3.2 -5.03314 | opp_overlap 667346, overlap 667346 GGCAGGCCCAAAAAA CGTGGA TTGA TCCACT TTCCAAAGCACTTTC ACIAD0672 666375 - 668282 + | hypothetical protein TERM 784 668320 - 668276 - T 100 -13.9 -5.07567 | opp_overlap 668281 668290, overlap 668280 668290 TTATAGTGTAAAAAA TAAATAATAAAAAAGGCCAGA TTA TCTGGCCTTTTTTATATCTTA GGAGTTAACCTGTAT TERM 785 668315 - 668280 - T 100 -14.4 -5.05153 | gap 1, opp_overlap 668281 668290, overlap 668276 668290 AGTGTAAAAAATAAA TAATAAAAAAGGCCAGA TTA TCTGGCCTTTTTTAT-A TCTTAGGAGTTAACC TERM 786 668281 - 668315 + T 100 -16 -3.06261 | opp_overlap 668280 668276 668290, overlap 668290 GTGTAAAAAATAAAT AATAAAAAAGGCCAGA TTA TCTGGCCTTTTTTATA TCTTAGGAGTTAACC TERM 787 668290 - 668306 + T 100 -12.3 -5.47431 | opp_overlap 668280 668276 668290, overlap 668281 ATAAATAATAAAAAA GGCCAGA TTA TCTGGCC TTTTTTATATCTTAG TERM 788 668306 - 668290 - T 100 -12.3 -5.74288 | opp_overlap 668290 668281, overlap 668280 668276 ATAAATAATAAAAAA GGCCAGA TTA TCTGGCC TTTTTTATATCTTAG ACIAD0673 668885 - 668325 - | putative MutT/nudix family protein TERM 789 668799 - 668809 + g 70 -5.4 -4.46926 | ACCGCAGTTTGTACA TACG CGG CGTA TTTTATGGTCACCTA ACIAD0674 668987 - 669601 + | putative MutT/nudix family protein TERM 790 669683 - 669667 - g 84 -2.9 -5.63236 | opp_overlap 669671, overlap 669669 ATCCAAAAACAAAAA CTCATCC ATG GAATGGG TGGATTGCAGGTAAT ACIAD0675 669627 - 670169 + | putative anhydratase ACIAD0677 670276 - 670941 + | putative glycoprotein endopeptidase metalloprotease ACIAD0678 670954 - 671778 + | putative bacitracin resistance protein BacA-like TERM 791 671878 - 671897 + G 86 -7.9 -4.68994 | opp_overlap 671878 CCGAACTGGTACAGA TCGAGCA GTTAAA TGCTCGA TTTTTACGTCATCAT ACIAD0679 671772 - 672584 + | putative methyltransferase ACIAD0681 672713 - 674146 + | hypothetical protein TERM 792 674235 - 674251 + G 75 -5.1 -4.83243 | overlap 674237 CCTGCTGCCTTGCAA GGTGAAC AGT GTTCAAC TTTATTTTATCTCGC ACIAD0682 674124 - 674954 + | putative esterase ACIAD0683 675302 - 675027 - | hypothetical protein ACIAD0684 675293 - 675502 + | hypothetical protein rpe 675484 - 676170 + | D-ribulose-5-phosphate 3-epimerase TERM 793 676302 - 676355 + F 80 -9.3 -3.60006 | gap 1, opp_overlap 676320, overlap 676310 676320 GTGTTTATAGCGTGA TC-TTTTCGCGAATAAAAAGAATACA TGA TGTATTCTTTTTATTCGTTTAAGCGA TTTAAAAATATAATT TERM 794 676310 - 676346 + F 100 -19.9 -3.5936 | opp_overlap 676320, overlap 676302 676320 AGCGTGATCTTTTCG CGAATAAAAAGAATACA TGA TGTATTCTTTTTATTCG TTTAAGCGATTTAAA TERM 795 676336 - 676320 - f 90 -8.1 -5.06414 | opp_overlap 676310 676302 676320 TTTCGCGAATAAAAA GAATACA TGA TGTATTC TTTTTATTCGTTTAA TERM 796 676320 - 676336 + F 90 -8.1 -5.24551 | opp_overlap 676320, overlap 676310 676302 TTTCGCGAATAAAAA GAATACA TGA TGTATTC TTTTTATTCGTTTAA ACIAD0686 676544 - 677002 + | hypothetical protein pcoA 677061 - 678821 + | copper resistance protein A precursor TERM 797 679602 - 679589 - g 71 -2.3 -5.22312 | opp_overlap 679589 ATGCACAGGAAAAAA CTTCC GAAC GGGAG TGGTTATACGGTGCG pcoB 678808 - 679638 + | copper resistance protein B precursor TERM 798 679628 - 679638 + F 86 -2.6 -5.93252 | GTGCGGGCATGACCT TTAA ATT TTAA TTTTTTGTTTTTCAA ACIAD0689 679663 - 680661 + | hypothetical protein sugE 680798 - 681118 + | suppressor of gro ogt 681122 - 681625 + | methylated-DNA--protein-cysteine methyltransferase (6-O-methylguanine-DNA methyltransferase) (O-6-methylguanine-DNA-alkyltransferase) ACIAD0693 682129 - 681683 - | hypothetical protein TERM 799 682242 - 682227 - R 95 -9 -5.31275 | opp_overlap 682227 TCTTATCATAAAAAA TCCCGA CTTG TCGGGA TTTATAGATGCATAA TERM 800 682227 - 682242 + r 82 -9 -3.92869 | opp_overlap 682227 TCTTATCATAAAAAA TCCCGA CTTG TCGGGA TTTATAGATGCATAA ACIAD0694 683436 - 682261 - | putative acetyl-CoA acetyltransferase (acetoacetyl-CoA thiolase) ACIAD0695 684070 - 683552 - | putative type 4 fimbrial biogenesis protein FimT ACIAD0697 684455 - 685522 + | putative Outer membrane protein precursor (OmpA-like) TERM 801 685548 - 685565 + T 100 -11.3 -5.73978 | opp_overlap 685548 ATCAGATAAAAAAAA GCAGCTC TTCG GAGCTGC TTTTTTATTTGTGCT TERM 802 685565 - 685548 - T 100 -11.3 -6.0427 | opp_overlap 685548 ATCAGATAAAAAAAA GCAGCTC TTCG GAGCTGC TTTTTTATTTGTGCT TERM 803 685992 - 685977 - T 95 -6.8 -5.77988 | opp_overlap 685977 ACAGACACAAAAAAA CCTGAC GAAT GCCAGG TTTGATTTAGAGCAT lysP 687655 - 686192 - | lysine-specific permease TERM 804 686596 - 686585 - G 75 -5.8 -4.69027 | opp_overlap 686593 AAATGTAGTTAAAAA GCAG AGTG CTGC AATTGCAGTTGTTGC rsmC 688690 - 687674 - | ribosomal RNA small subunit methyltransferase C (rRNA (guanine-N(2)-)-methyltransferase) (16S rRNA m2G1207 methyltransferase) TERM 805 688732 - 688715 - R 100 -11.3 -4.48713 | CTCATGAATAACAAA GCCCAGT CAAT ACTGGGC AAATCTGTTGAATTA ACIAD0702 690127 - 688754 - | putative transporter TERM 806 689859 - 689832 - G 70 -5.6 -4.32201 | CCAATGAAGTTAAAA CTGGTGCCTTGA ACAA TCAAAAGACCAG CACCTAAAGGACCGA TERM 807 691413 - 691425 + G 74 -7.7 -3.96452 | AAAGTATCTGGCCGT GGTGA GCT TCACC TTTCAGTTTTAATTG typA 690306 - 692138 + | GTP-binding elongation factor family protein TERM 808 692187 - 692163 - f 78 -7.2 -4.31379 | opp_overlap 692165, overlap 692165 ATTAAGTCATCAAAA GACCGCTAAA TTTGC TTTAGCGGTT TTTTTTTATGGCATA TERM 809 692185 - 692165 - f 83 -9.8 -3.75571 | opp_overlap 692165, overlap 692163 TAAGTCATCAAAAGA CCGCTAAA TTTGC TTTAGCGG TTTTTTTTTATGGCA TERM 810 692165 - 692185 + F 100 -9.8 -6.22802 | opp_overlap 692165 692163 TAAGTCATCAAAAGA CCGCTAAA TTTGC TTTAGCGG TTTTTTTTTATGGCA mscL 692415 - 692855 + | mechanosensitive channel TERM 811 692906 - 692888 - f 100 -14.6 -4.07568 | opp_overlap 692888 GGTTGCTTGTGAAAA CGGTACGC GGT GCGTACCG TTTTTTTATATGAAT TERM 812 692888 - 692906 + F 100 -14.6 -5.72616 | opp_overlap 692888 GGTTGCTTGTGAAAA CGGTACGC GGT GCGTACCG TTTTTTTATATGAAT ACIAD0705 693011 - 693358 + | hypothetical protein TERM 813 693393 - 693367 - T 82 -8.8 -4.03174 | opp_overlap 693367 AAACTGATTAAATAA GGCTTAAATACT TAA AGTGCTTAAGCC TTTTATTCAACGAAA TERM 814 693367 - 693393 + T 89 -8.8 -4.63218 | opp_overlap 693367 AAACTGATTAAATAA GGCTTAAATACT TAA AGTGCTTAAGCC TTTTATTCAACGAAA ppiC 693687 - 693400 - | peptidyl-prolyl cis-trans isomerase precursor (PPIase) (rotamase) mutM 694541 - 693723 - | formamidopyrimidine-DNA glycosylase TERM 815 693986 - 693955 - G 78 -8.9 -3.90291 | gap 1 ATTTCTTGAACTAAA GCCAG-AATTTGAG GCTTA CTCAAACTACTGGC AGGCTGGGCAGGGTG TERM 816 694691 - 694701 + H 82 -5.4 -5.29782 | overlap 694690 GATCTGATCAGGCAT CGAT AAA ATCG TTTTTTGTCGATATG TERM 817 695661 - 695649 - g 72 -7.7 -3.76775 | TCGAACAGACGCAAA CAGGT GTG ACCTG GAGTAAACCCATCAA TERM 818 696865 - 696876 + G 80 -3.6 -5.40072 | opp_overlap 696873 GGTGATTGTTAATGA TGGC AATA GCCG TTTTTTTGAACCGGC ACIAD0708 694784 - 696940 + | putative tonB-dependent receptor protein ACIAD0709 696960 - 698072 + | putative FMN oxidoreductase TERM 819 698231 - 698241 + G 82 -6.8 -4.90079 | opp_overlap 698230 698231 CCTGAGCAGATCAAG GCAC TCA GTGC TTTTATTATTAAAAT ACIAD0710 698138 - 699061 + | putative transporter TERM 820 699060 - 699089 + T 70 -8 -3.1595 | opp_overlap 699064, overlap 699054 699064 TTATGTTGTGGTGGT GAAACTGCCTTA AATGTG TAAGACAGTTTC TGATATTTTTTTAGT ACIAD0711 699870 - 699106 - | hypothetical protein TERM 821 700100 - 700081 - R 84 -6.4 -5.03747 | AAACTTTGTAAAAAA GCTCCCCA ATCA TGAAGAGC TTTTGAAGAAAGATA ACIAD0713 700905 - 700198 - | putative thiol:disulphide interchange protein (DsbC-like) TERM 822 701112 - 701095 - R 100 -9.9 -5.36441 | opp_overlap 701095 TCTGGATATAAAAAA GCCTTCA AATT TGAAGGC TTAATTCGAGCTCAA TERM 823 701095 - 701112 + r 81 -9.9 -3.34895 | opp_overlap 701095 TCTGGATATAAAAAA GCCTTCA AATT TGAAGGC TTAATTCGAGCTCAA ACIAD0714 701863 - 701141 - | hypothetical protein rluA 702056 - 702715 + | dual specificity pseudouridine synthase for 23S rRNA and tRNAphe modification ACIAD0716 702842 - 703225 + | hypothetical protein ACIAD0717 703360 - 703800 + | hypothetical protein TERM 824 704363 - 704389 + G 79 -8 -4.26634 | CGTGATGGCTTATCT TGGAAGCTGGTT GAT ATCAAGCTTCCA TTTTAGAATTCTTTT ACIAD0718 703877 - 704395 + | putative signal peptide ACIAD0719 704461 - 704805 + | putative alkylphosphonate uptake protein (PhnA) in phosphonate metabolism TERM 825 704831 - 704817 - f 79 -10 -3.28265 | opp_overlap 704817, overlap 704815 ATAAACAGATGAAGA GGGAGT ACA ACTCCC TTTTTTATTGCAGGA TERM 826 704817 - 704831 + F 100 -10 -5.4505 | opp_overlap 704815 704817 ATAAACAGATGAAGA GGGAGT ACA ACTCCC TTTTTTATTGCAGGA ACIAD0720 704853 - 705257 + | putative MutT/nudix family protein TERM 827 705378 - 705366 - f 80 -2.7 -5.75945 | ATTGTTTAAAAAAAA TACGA AAC TCATA ATAACAGGGGATAGC ACIAD0721 705393 - 705731 + | hypothetical protein TERM 828 705797 - 705814 + T 76 -2.6 -5.52909 | opp_overlap 705797, overlap 705787 TTAAGTATGAAAAAA CCGCCT ATTAAA AGACGG TTTTTTTGAATATTA TERM 829 705814 - 705797 - T 80 -4.8 -5.2189 | opp_overlap 705797 705787 TTAAGTATGAAAAAA CCGCCT ATTAAA AGACGG TTTTTTTGAATATTA nrdB 707126 - 705843 - | ribonucleotide-diphosphate reductase subunit beta TERM 830 707024 - 707036 + g 77 -6.2 -4.70659 | opp_overlap 707022 707018 707023 CATCAGATACCAACG GCGC AGCTG GCGC TTTTTGCGTATCGAC TERM 831 707443 - 707419 - R 95 -14.5 -3.28712 | opp_overlap 707419 707424, overlap 707424 CCCGCTCTCGTAGAA GGAAATATCAG ATT CTGATATTTCC TTTATGGTGTCTTAC TERM 832 707419 - 707443 + r 100 -14.5 -4.06505 | opp_overlap 707419 707424, overlap 707424 CCCGCTCTCGTAGAA GGAAATATCAG ATT CTGATATTTCC TTTATGGTGTCTTAC TERM 833 707424 - 707438 + r 75 -7.2 -4.16785 | opp_overlap 707419 707424, overlap 707419 TCTCGTAGAAGGAAA TATCAG ATT CTGATA TTTCCTTTATGGTGT TERM 834 707438 - 707424 - R 73 -7.2 -3.9941 | opp_overlap 707424 707419, overlap 707419 TCTCGTAGAAGGAAA TATCAG ATT CTGATA TTTCCTTTATGGTGT nrdA 710280 - 707455 - | ribonucleotide-diphosphate reductase subunit alpha TERM 835 707841 - 707870 + g 71 -2.1 -5.24129 | overlap 707834 ATGCAGTTGCAAAGA TTGCCTTTAATTC TTCA GGAATACGGGCAA TTTTTTGTACCGAAC TERM 836 708403 - 708378 - G 70 -7.5 -3.89346 | TGTTCATTTCATAAA GTGCATCTTGG AAGC CCATGATGCCC ATACCAACTGGACGA TERM 837 710101 - 710089 - G 72 -7.7 -3.75461 | opp_overlap 710089 710088 TAAACGGCGATTAAA GGTGT TTA ACACC ATTTCGGTTAACTGA TERM 838 711170 - 711183 + G 76 -8.1 -4.21974 | CCACGTGTATTACTG GCACG AATT CGTGC TTTGTTGCGTCGTAC rstA 710825 - 711541 + | two-component regulatory system response regulator TERM 839 712008 - 712020 + G 71 -3.3 -4.92783 | GGTGAGCGTCAAATG AAGGC GCT GCCTA TTTTTATCCTGGATT TERM 840 712850 - 712864 + G 74 -7.8 -3.98075 | CACTTATGTTATGGT CGATGC AGA GCGTCG TTATTTGCATCGTGT TERM 841 713155 - 713165 + G 77 -8.2 -3.9712 | opp_overlap 713154 AAAGTCCAGAATTAG GCGG CGC CCGC TTTGTGATGCAGTGG rstB 711588 - 713228 + | sensory histidine kinase in two-component regulatory system with RstA TERM 842 713261 - 713239 - T 100 -9.9 -5.9218 | opp_overlap 713239 TATAGAACAAAAAAA CAAGGCAGC GATAA ACTGCCTTG TTTTTTAAATTTTAA TERM 843 713239 - 713261 + T 100 -9.2 -5.2696 | opp_overlap 713239 TATAGAACAAAAAAA CAAGGCAG CGATAAA CTGCCTTG TTTTTTAAATTTTAA ACIAD0728 713639 - 713280 - | hypothetical protein TERM 844 714557 - 714571 + G 73 -2.8 -5.20333 | TCGGGTGGATGGGCT TTACCA CGA TGGTTA TTTTTGTTGTAGATC nuoA 714274 - 714825 + | NADH dehydrogenase I chain A TERM 845 715107 - 715126 + G 73 -8.6 -3.61517 | AATTCGTGCTTCACC TCGTCAGG CTGA CCTGATGA TTGTTGCAGGAACGT nuoB 714832 - 715509 + | NADH dehydrogenase subunit B nuoCD 715591 - 717378 + | bifunctional NADH:ubiquinone oxidoreductase subunit C/D nuoE 717388 - 717900 + | NADH dehydrogenase subunit E TERM 846 718048 - 718035 - g 71 -3.1 -5.02074 | GCAGGTTTTAAAAAA GCCAT TGGC ATGAC ACCTGCTGAAGTCCT nuoF 717897 - 719228 + | NADH dehydrogenase I chain F TERM 847 719303 - 719293 - g 76 -6.8 -4.4767 | opp_overlap 719292 CGATGGATCAGAAAA CCTG TTG CAGG CCTGTTTATCACTTG TERM 848 719616 - 719589 - g 70 -9.2 -2.8655 | opp_overlap 719585, overlap 719592 719594 GTCATTTACAGGACA TGACAGTCATGA CAGG TCATGACCGTCG TCGCTATCGTTTCAC TERM 849 720393 - 720406 + G 70 -8.1 -3.60525 | opp_overlap 720390 ATCTGACTCAAACTG CGCCA CGTA TGGCG TTGTCTGTACGTCAG TERM 850 720450 - 720437 - g 70 -3.8 -4.85782 | GCTGCTAAAAACAAA GCCA AGCAAA TGGC AGCAGATCGTCGTAC nuoG 719240 - 721924 + | NADH dehydrogenase subunit G nuoH 721943 - 722944 + | NADH dehydrogenase subunit H nuoI 722963 - 723505 + | NADH dehydrogenase subunit I nuoJ 723502 - 724023 + | NADH dehydrogenase I chain J nuoK 724023 - 724331 + | NADH dehydrogenase I chain K nuoL 724328 - 726223 + | NADH dehydrogenase subunit L TERM 851 726265 - 726277 + G 71 -3.3 -4.9448 | CGCTGATACTCGTTC CCTTC ATT GCAGG TTTTCTTTGCTGGAT nuoM 726225 - 727823 + | NADH dehydrogenase subunit M nuoN 727839 - 729323 + | NADH dehydrogenase I chain N TERM 852 729365 - 729344 - f 95 -8.7 -5.06414 | opp_overlap 729346, overlap 729346 GGTTTTTAACAAAAA GAGCCTCCA TTTT TGGAGGCTT TTTTTATTTCATGTT TERM 853 729346 - 729363 + F 100 -11.3 -5.99154 | opp_overlap 729346 729344 TTTTTAACAAAAAGA GCCTCCA TTTT TGGAGGC TTTTTTTATTTCATG TERM 854 729363 - 729346 - f 100 -11.3 -4.16307 | opp_overlap 729346, overlap 729344 TTTTTAACAAAAAGA GCCTCCA TTTT TGGAGGC TTTTTTTATTTCATG upp 729421 - 730065 + | uracil phosphoribosyltransferase TERM 855 730082 - 730107 + F 100 -14.9 -5.46129 | opp_overlap 730082, overlap 730087 TCCTAAAAATAAAAA CAAAAGCCACA ATAT TGTGGCTTTTG TTTTTTCATTTCTTG TERM 856 730107 - 730082 - f 100 -14.9 -5.61881 | opp_overlap 730082 730087 TCCTAAAAATAAAAA CAAAAGCCACA ATAT TGTGGCTTTTG TTTTTTCATTTCTTG TERM 857 730087 - 730102 + F 95 -9 -5.47846 | opp_overlap 730082, overlap 730082 AAAATAAAAACAAAA GCCACA ATAT TGTGGC TTTTGTTTTTTCATT TERM 858 731652 - 731638 - g 77 -5 -5.01546 | AAATTTATATAAAAA CTCAAA TTA TTCGAG CGATAAGGTTTCTCC ACIAD0745 730250 - 732391 + | putative ferric siderophore receptor protein TERM 859 732440 - 732401 - T 100 -16.2 -3.5013 | opp_overlap 732412, overlap 732412 TTCTAAATGAAGGAA TAAATAAAAAACTCTTTC AATT GAAAGAGTTTTTTATTCA GATTAATGAAATCGC TERM 860 732412 - 732429 + T 95 -8.5 -5.4756 | opp_overlap 732412 732401 GGAATAAATAAAAAA CTCTTTC AATT GAAAGAG TTTTTTATTCAGATT TERM 861 732429 - 732412 - T 100 -8.5 -5.80003 | opp_overlap 732412, overlap 732401 GGAATAAATAAAAAA CTCTTTC AATT GAAAGAG TTTTTTATTCAGATT ACIAD0746 733351 - 732464 - | LysR family transcriptional regulator fpr 733437 - 734198 + | ferredoxin--NADP+ reductase ACIAD0748 734752 - 734330 - | hypothetical protein ACIAD0749 734908 - 735144 + | hypothetical protein TERM 862 735176 - 735201 + F 79 -5.4 -5.10077 | opp_overlap 735176, overlap 735168 735165 ATCTCAATCAAAAGA GGCGCTTGAT ATGTAA AGCAAGTGCC TTTTTTGCAATGTTT ACIAD0750 735373 - 737043 + | hypothetical protein TERM 863 737092 - 737063 - T 90 -12.2 -3.52204 | opp_overlap 737063 737065 737084, overlap 737045 737059 737065 TGATTTTTAAATCAA GATCGGCCACTC TATCAT GAGTGGCCGATG TTTTGGTCATCTATA TERM 864 737063 - 737092 + T 100 -12.2 -4.34345 | opp_overlap 737045 737063 737059 737065, overlap 737065 737084 TGATTTTTAAATCAA GATCGGCCACTC TATCAT GAGTGGCCGATG TTTTGGTCATCTATA TERM 865 737090 - 737065 - T 95 -14.8 -3.33419 | opp_overlap 737063 737065 737084, overlap 737063 737059 ATTTTTAAATCAAGA TCGGCCACTC TATCAT GAGTGGCCGA TGTTTTGGTCATCTA TERM 866 737065 - 737090 + T 100 -14.8 -3.76811 | opp_overlap 737065 737063 737059, overlap 737063 737084 ATTTTTAAATCAAGA TCGGCCACTC TATCAT GAGTGGCCGA TGTTTTGGTCATCTA TERM 867 737238 - 737227 - T 74 -5.8 -4.59773 | GTTTATTTTTAAAAA GCCA AAAG TGGC AAATCCATCAGATCC TERM 868 737347 - 737320 - T 75 -9.8 -2.6989 | overlap 737317 AAAGTATTAAACGTA TTGGGCAGCAGC AAAT GCAGATGCCCAA GCCCATTGGAAATTG ACIAD0752 738507 - 737311 - | oxidoreductase ACIAD0753 739462 - 738578 - | putative D-cysteine desulfhydrase (DcyD) ACIAD0754 740074 - 739472 - | hypothetical protein TERM 869 739620 - 739634 + g 82 -5.6 -4.91712 | TGCTTTTTGACTTCA CGGCTA CAG TCGCCG TTTTTATAAATTCCC ACIAD0755 741325 - 740156 - | putative multidrug resistance efflux pump ACIAD0756 743002 - 741341 - | MFS family transporter ACIAD0757 743591 - 742995 - | TetR family transcriptional regulator ACIAD0758 743759 - 744523 + | putative methyltransferase ACIAD0759 744567 - 745190 + | putative threonine efflux protein (RhtC) TERM 870 745223 - 745241 + F 85 -4.6 -5.69793 | overlap 745215 TCTACACTATAAAAA GTATGGAT TTT ATCTGTAC TTTTTTATTTAATAT ACIAD0760 745303 - 745527 + | hypothetical protein TERM 871 745610 - 745573 - T 71 -8.6 -3.00106 | opp_overlap 745584, overlap 745572 CTGAATTTAAATAAT TTTTTGAGTAAGACCA TAAATG TGGTCTTACTCAAATT CAGATTAGGCAGCCA ACIAD0761 746979 - 745615 - | hydroxydechloroatrazine ethylaminohydrolase TERM 872 747137 - 747115 - R 100 -9.2 -4.70659 | CGTCATATTGAAAAA GCCAAACATT AAA ACTGTTTGGC TTGGGGCAAAGCAGG ACIAD0762 748582 - 747161 - | putative permease TERM 873 748942 - 748926 - g 81 -5.1 -5.21236 | opp_overlap 748928, overlap 748928 AATTCATAAGAAAAA CTCGATT GCC AATCGTG GTTATGAACCGTTAA TERM 874 749077 - 749057 - g 86 -6.9 -4.93877 | overlap 749064 749067 CCGTATTAAACAAAA GATTTAACC ACG GGCCAAATC AATGGCCCGAACAAT TERM 875 749086 - 749067 - g 77 -10.7 -2.81509 | overlap 749057 749064 CAAAAGATTTAACCA CGGGCCA AATCAA TGGCCCG AACAATTTCCTGAAT TERM 876 749304 - 749287 - g 70 -2.7 -5.00138 | gap 1 GAGCCAAATGAAAAA GGT-TGCG GAG CACATACC GATTTTGGTGCATTA ACIAD0764 748702 - 749652 + | putative oxidoreductase ACIAD0765 749645 - 750436 + | putative enzyme ACIAD0766 751478 - 750501 - | putative hydrolase ACIAD0767 752516 - 751605 - | hypothetical protein TERM 877 751666 - 751680 + g 73 -2.9 -5.2189 | opp_overlap 751666 TTGTAGCCATCACAA TATTC GAAAG GAATA TTTTTTAGTAATTCA TERM 878 751768 - 751758 - G 76 -2.6 -5.30189 | TATAACATTAAAAAA TATA ATA TATA GTTCAGCATTAGAAA TERM 879 752563 - 752541 - R 76 -7.7 -3.97057 | opp_overlap 752541 752562 TATAACTTAATGAAA GCCCCACTA AAATA TAGCAGGGC TTTTTGAAGCTGTCT metG 754642 - 752585 - | methionyl-tRNA synthetase TERM 880 754798 - 754775 - R 100 -15.4 -4.2018 | overlap 754764 AAACGCTTAAAACAA CTCAAGCCTG CGAG CAGGCTTGAG GGAGATAAATCAAGA tsx 755669 - 754824 - | nucleoside-specific channel-forming protein TERM 881 755900 - 755911 + H 95 -3 -6.31682 | CTATTTTGAGAAATT TACT GAAA AGTA TTTTTTTTTAATTTT TERM 882 756081 - 756105 + H 74 -2.2 -5.41359 | TATGCATGATTAATG TGCATAAAAT TTACC ATTTGGTGCA TTTTTTAGTTTAATT TERM 883 756341 - 756351 + G 78 -5.4 -5.0538 | overlap 756336 ATGTATCATCTTTGT TGCA AAT TGCA TTTTTTAAACTACCC ACIAD0770 756326 - 756934 + | hypothetical protein ACIAD0772 757055 - 758308 + | putative ATP-binding protein ACIAD0773 758483 - 759358 + | putative MTA/SAH nucleosidase TERM 884 759367 - 759386 + T 100 -10 -5.46629 | opp_overlap 759367 CAATTAATTACTTAA GGTCGAAC TGCG GTTCGGCC TTTTTTTGACGTCTT ACIAD0774 759925 - 759359 - | hypothetical protein ACIAD0775 760355 - 760948 + | hypothetical protein dcd 761046 - 761615 + | deoxycytidine triphosphate deaminase TERM 885 761664 - 761636 - f 100 -11.1 -4.30978 | opp_overlap 761637 761642, overlap 761637 761642 TTCAAGCGATTAAAA GCAAAAGGCGATA TAA TATCGCCTTTCGT TTATCGGAAAAGTTT TERM 886 761637 - 761663 + F 95 -12.4 -3.86194 | opp_overlap 761637 761636 761642, overlap 761642 TCAAGCGATTAAAAG CAAAAGGCGATA TAA TATCGCCTTTCG TTTATCGGAAAAGTT TERM 887 761663 - 761637 - f 95 -14.6 -3.18105 | opp_overlap 761637 761642, overlap 761636 761642 TCAAGCGATTAAAAG CAAAAGGCGATA TAA TATCGCCTTTCG TTTATCGGAAAAGTT TERM 888 761642 - 761658 + F 100 -10.9 -4.13995 | opp_overlap 761642 761637 761636, overlap 761637 CGATTAAAAGCAAAA GGCGATA TAA TATCGCC TTTCGTTTATCGGAA TERM 889 761658 - 761642 - f 100 -10.9 -4.70319 | opp_overlap 761637 761642, overlap 761637 761636 CGATTAAAAGCAAAA GGCGATA TAA TATCGCC TTTCGTTTATCGGAA TERM 890 762762 - 762745 - g 71 -9.1 -3.37487 | overlap 762743 GTACATGTCTAAATA CGCCTGC GATT ACAGGCG AGAGTGCACCTAACT ACIAD0777 761838 - 763226 + | hypothetical protein ACIAD0778 763238 - 763870 + | putative signal peptide TERM 891 764812 - 764787 - g 71 -6.9 -4.09108 | gap 1, opp_overlap 764792, overlap 764781 GTCAATGCAGATAAA CCGACTTTGGGC GGT GCTCAAA-TCGG TTCAACCACTGCGAG TERM 892 765486 - 765460 - g 76 -6.6 -4.43477 | overlap 765463 765465 GTGATGGAAGTAAAA CAACTTCAATCA TGC TGATTGATGGTG CAAAAAATTCAACCA TERM 893 765483 - 765463 - g 74 -6.9 -4.33004 | overlap 765460 765465 ATGGAAGTAAAACAA CTTCAATCA TGC TGATTGATG GTGCAAAAAATTCAA ACIAD0779 763884 - 766142 + | hypothetical protein TERM 894 766315 - 766330 + G 74 -4 -4.91712 | CAGGGGGTTCCAATC CCAATG CAAA TATTGG TTTTTATCGCTTGGG TERM 895 767134 - 767144 + G 73 -5.4 -4.72386 | opp_overlap 767134 ATAATTTGAATATTA CACA AGA TGTG TTTTTAAGTGCTTTC TERM 896 767173 - 767211 + G 78 -9.7 -3.54408 | opp_overlap 767175, overlap 767169 TCGGTCAGGCTATAC CAGGAGCAATATTCGGT ACTCC AGTGAATCTTGCTCCTG TTGATTTGGGTCAGA ACIAD0780 766158 - 767267 + | hypothetical protein TERM 897 768009 - 768022 + G 79 -8.1 -4.2679 | GGATTTTTTATGTCT GGTGG TTTC CCACC TTTTGCTGCAAATTC ACIAD0781 767415 - 768143 + | hypothetical protein TERM 898 768175 - 768155 - T 79 -9.9 -3.21806 | opp_overlap 768174, overlap 768174 GTAATCAATATCTAA GCTTTTTTT GAT AAAAAAAGC AGGTATCAAACCTGC TERM 899 768174 - 768190 + T 90 -8 -5.09173 | opp_overlap 768155 768174 TTTTTGATAAAAAAA GCAGGT ATCAA ACCTGC TTTTTTAAAATCTTA TERM 900 768190 - 768174 - T 93 -8 -5.60993 | opp_overlap 768174, overlap 768155 TTTTTGATAAAAAAA GCAGGT ATCAA ACCTGC TTTTTTAAAATCTTA proS 769922 - 768210 - | prolyl-tRNA synthetase TERM 901 770008 - 769988 - R 100 -9.1 -5.58179 | opp_overlap 769987 GATTATAATAAAAAA TGAGATGAA TAA TTCACCTCA CTTGATAAAAAACCG nolG 773126 - 770025 - | nodulation protein precursor TERM 902 770993 - 771011 + g 71 -4.5 -4.62203 | CAAGCACTCGATTGA CCTGCAC AGAAA GTGTGGG TTTTGGTTCTTTGAG nolF 774259 - 773150 - | nodulation protein ACIAD0785 774960 - 774316 - | hypothetical protein pilG 775213 - 775596 + | twitching motility protein pilH 775620 - 775991 + | twitching motility protein TERM 903 776095 - 776107 + G 74 -4.9 -4.78839 | opp_overlap 776095 776098, overlap 776090 776098 GCATTGCTTTTGAAA TATTG GGA CAATA TTTTGTTGTACCATT pilI 775995 - 776513 + | twitching motility protein TERM 904 776697 - 776713 + G 78 -9.5 -3.72485 | opp_overlap 776699 GCTCGTTCTTTATTA CAGGTTA TTT TAACCTG TTTGGCATTCTCTTT pilJ 776556 - 777989 + | type IV pilus biogenesis protein TERM 905 779239 - 779257 + G 70 -6 -4.37013 | TTTATCAAGACTTAC TCAGTACA GCA TGTACCGA TTTTCCTGCTTCATT chpA 778074 - 782387 + | component of chemotactic signal transduction system TERM 906 782409 - 782392 - T 100 -11.3 -5.61689 | opp_overlap 782392 AAAACCAATAAAAAA GGGACTC ATTT GAGTCCC TTCATAATTAAGCTA TERM 907 782392 - 782409 + T 87 -11.3 -3.27774 | opp_overlap 782392 AAAACCAATAAAAAA GGGACTC ATTT GAGTCCC TTCATAATTAAGCTA dapE 783550 - 782417 - | succinyl-diaminopimelate desuccinylase TERM 908 783647 - 783630 - R 100 -8.5 -5.95539 | opp_overlap 783630 GCTCAAACAAAAAAA CCTTATC AAAA GATAAGG TTTTTTTGTTTTTAT TERM 909 783630 - 783647 + r 100 -8.5 -6.23317 | opp_overlap 783630 GCTCAAACAAAAAAA CCTTATC AAAA GATAAGG TTTTTTTGTTTTTAT ecnB 783812 - 783669 - | bacteriolytic lipoprotein entericidin B ACIAD0793 784816 - 783956 - | hypothetical protein ACIAD0794 784959 - 785372 + | hypothetical protein TERM 910 785513 - 785498 - g 70 -2.5 -4.91573 | overlap 785499 AAAATACAGGAAAAA CGCCA AGAGGA TGGCA TCAGATTGCTGAGAA ACIAD0795 785365 - 785868 + | hypothetical protein ACIAD0797 786892 - 787356 + | hypothetical protein TERM 911 787383 - 787426 + T 100 -12 -5.02715 | opp_overlap 787387 787389, overlap 787387 787389 AATAGCTAATCAGTA TAAATATGCTATCTAATAGC CTAA GCTACTAGATAGCATGATTA TTTTTGATTTAGTAT TERM 912 787387 - 787422 + T 91 -12.8 -3.33592 | opp_overlap 787387 787389, overlap 787383 787389 GCTAATCAGTATAAA TATGCTATCTAATAGC CTAA GCTACTAGATAGCATG ATTATTTTTGATTTA TERM 913 787422 - 787387 - T 100 -12.8 -4.02022 | opp_overlap 787387 787383 787389, overlap 787389 GCTAATCAGTATAAA TATGCTATCTAATAGC CTAA GCTACTAGATAGCATG ATTATTTTTGATTTA TERM 914 787389 - 787420 + T 91 -13.2 -3.20235 | opp_overlap 787387 787389, overlap 787387 787383 TAATCAGTATAAATA TGCTATCTAATAGC CTAA GCTACTAGATAGCA TGATTATTTTTGATT TERM 915 787420 - 787389 - T 100 -15.4 -3.59935 | opp_overlap 787389 787387 787383, overlap 787387 TAATCAGTATAAATA TGCTATCTAATAGC CTAA GCTACTAGATAGCA TGATTATTTTTGATT ACIAD0798 788100 - 787435 - | hypothetical protein TERM 916 788336 - 788309 - R 100 -14.4 -3.95653 | opp_overlap 788314, overlap 788314 AAACAATCGCATAAA TAAAACCGAAGT TTTC ACTTCGGTTTTA TGACGTGGTTTACAT TERM 917 788314 - 788331 + r 100 -9.9 -4.41206 | opp_overlap 788309 788314 ATCGCATAAATAAAA CCGAAGT TTTC ACTTCGG TTTTATGACGTGGTT TERM 918 788331 - 788314 - R 100 -9.9 -4.99645 | opp_overlap 788314, overlap 788309 ATCGCATAAATAAAA CCGAAGT TTTC ACTTCGG TTTTATGACGTGGTT ACIAD0799 791001 - 788356 - | putative bifunctional sulfite reductase [NADPH] flavoprotein alpha-component/iron-uptake factor TERM 919 789913 - 789892 - G 72 -7.3 -3.91488 | AACCGGCCCAAAGAA GCTACCG CGATGTAC CGGTAGC ATACTGCTCATGATT TERM 920 790054 - 790065 + g 71 -2.2 -5.09225 | AAAGATAAGTTCAAT GTTG TTAT CAGC TTTTTTGGGTAAAGT TERM 921 790324 - 790346 + g 71 -7 -4.11394 | TCCCTGCATTTGAGG TTGTGGACGT TCA ACGCCCATAA TTTTAAACATGCCAT TERM 922 791121 - 791135 + r 75 -7.1 -4.15044 | opp_overlap 791121 TATGCGTATAAAAAA CCTCC ATTAA GGAGG TTTCTTAACAACAAC TERM 923 791135 - 791121 - R 89 -7.1 -5.252 | opp_overlap 791121 TATGCGTATAAAAAA CCTCC ATTAA GGAGG TTTCTTAACAACAAC ACIAD0800 791718 - 791158 - | hypothetical protein ACIAD0801 793985 - 791811 - | hypothetical protein TERM 924 793454 - 793444 - G 84 -5.4 -5.26119 | TTTGCAAAAAGAAAA TCTC CCA GAGA TGAATAGCATGCTGC TERM 925 793905 - 793893 - G 74 -7.7 -3.91434 | opp_overlap 793900 AAAGTAGGGGACAAA TGCAG TGC CTGCA AATGCAATGAGCATT TERM 926 794578 - 794608 + G 89 -10.4 -3.98236 | overlap 794579 GATTGTAATGGGAAT TGCACCTATTGCAG CAC CTGCATTAGGAGCG TTTGTACTGGAGTTT TERM 927 794579 - 794607 + G 83 -11.7 -2.98219 | overlap 794578 ATTGTAATGGGAATT GCACCTATTGCAG CAC CTGCATTAGGAGC GTTTGTACTGGAGTT ACIAD0802 794135 - 795346 + | MFS superfamily bicyclomycin/multidrug transport protein TERM 928 795368 - 795385 + T 88 -7 -5.08601 | opp_overlap 795368 AATTGCATACAAAAA GACCTG AATGCA CAGGTC TTTTTATTCAGATCG TERM 929 795385 - 795368 - T 88 -7 -4.98522 | opp_overlap 795368 AATTGCATACAAAAA GACCTG AATGCA CAGGTC TTTTTATTCAGATCG ACIAD0803 796117 - 795407 - | putative nitroreductase TERM 930 796559 - 796573 + G 70 -7.2 -3.88137 | TTAGGGCGATTTTTA GTCAAT AAA ATTGAC TTTCTGAGACGTTAT TERM 931 796639 - 796667 + G 76 -6.7 -4.41633 | AGCAACAGTTTCGTT TGCTGTACACTCG ATT TGGGGGTATAGCA TTATTTTTAGCAGTG TERM 932 797644 - 797662 + G 91 -5.2 -5.59655 | overlap 797648 TAAAGCATTTTTAAT TGTTCCAC TGT GTGGTGCA TTTTTTGTTGATTTA gltS 796487 - 797722 + | sodium/glutamate symport carrier protein TERM 933 797770 - 797801 + F 93 -9.7 -4.21631 | opp_overlap 797779, overlap 797777 797798 CGCAATGTCGATAAG TAAAAAAGTCTCT AGTCAC AGAGGCTTTTTTA TTTGTTAAATAGATT TERM 934 797777 - 797794 + F 89 -3.4 -5.80003 | opp_overlap 797779, overlap 797770 TCGATAAGTAAAAAA GTCTCT AGTCAC AGAGGC TTTTTTATTTGTTAA ACIAD0805 797837 - 799336 + | putative amino-acid transport protein TERM 935 799356 - 799374 + F 93 -8.1 -5.61596 | opp_overlap 799356 799354 ATCTTATTTTAAAGA CAGTCCG ATATA CGGGCTG TTTTTTTATGACAAT ACIAD0806 799476 - 800426 + | hypothetical protein TERM 936 800491 - 800458 - T 79 -10.5 -2.95521 | opp_overlap 800458 800455, overlap 800464 TGTAGAGTAATTAGA GGAAAATCAAAAACG TTTC CATATTTGATTTTCC TGATTTAGTGCCAAA ACIAD0807 800658 - 800464 - | hypothetical protein ACIAD0808 801379 - 800801 - | putative protease sbmA 801652 - 802845 + | transport protein TERM 937 802858 - 802893 + T 87 -12.9 -2.94298 | opp_overlap 802863, overlap 802863 TAGTCAATTTCGATT TAAAATGACTCTTAG ATCGAA CTGAGAGTCATTTTA TGCATTTTTTAATCA TERM 938 802863 - 802888 + T 84 -8.4 -4.58242 | opp_overlap 802863, overlap 802858 AATTTCGATTTAAAA TGACTCTTAG ATCGAA CTGAGAGTCA TTTTATGCATTTTTT ACIAD0810 803142 - 802912 - | hypothetical protein ACIAD0811 803810 - 803286 - | putative chromate transport protein ACIAD0812 804376 - 803807 - | putative chromate transport protein TERM 939 803965 - 803946 - G 72 -7.2 -3.92577 | overlap 803944 TAACTTTTAAAAATA GGCCTTAA CATT TTAAGACC CGTAGCAAATAACAA ACIAD0813 804477 - 805400 + | putative transcriptional regulator ACIAD0814 806088 - 805390 - | putative signal peptide TERM 940 805563 - 805587 + g 84 -6.5 -4.91459 | overlap 805565 AGAAAGCGGTGTGTT TGGATGGATGT ACC ACATTCATCAA TTTTTGTGAGTCTTG ACIAD0815 806277 - 807356 + | hypothetical protein ACIAD0816 807394 - 808170 + | hypothetical protein ACIAD0817 808211 - 808342 + | hypothetical protein TERM 941 808603 - 808593 - g 70 -5.4 -4.51174 | overlap 808597 TCATTACAATTAAAA GCAT GGA ATGC ATTCAATCCGAATTT ACIAD0818 808377 - 809435 + | hypothetical protein TERM 942 809815 - 809803 - g 74 -4.1 -5.06816 | overlap 809808 AGCGCTGAACAAAAA GATCA GCT TGACC AAAAGCTTGCACAAG ACIAD0819 809554 - 810078 + | hypothetical protein TERM 943 810643 - 810623 - g 76 -2.6 -5.33405 | opp_overlap 810594 TGGATCAAACAAAAA TTATGAGC TGCTT GATCATAA AGGTGGTAATGAATG ACIAD0820 810384 - 810776 + | hypothetical protein ACIAD0821 810855 - 811034 + | hypothetical protein TERM 944 811046 - 811071 + T 100 -16.3 -3.58269 | opp_overlap 811046 811051, overlap 811051 TTAACCTCTGAATAA GAAAACCCGCT CTAA AGCGGGTTTTC TTTGAAACTAGATTA TERM 945 811071 - 811046 - T 100 -16.3 -3.63569 | opp_overlap 811046 811051, overlap 811051 TTAACCTCTGAATAA GAAAACCCGCT CTAA AGCGGGTTTTC TTTGAAACTAGATTA TERM 946 811066 - 811051 - T 100 -10.4 -4.89477 | opp_overlap 811046 811051, overlap 811046 CTCTGAATAAGAAAA CCCGCT CTAA AGCGGG TTTTCTTTGAAACTA TERM 947 811051 - 811066 + T 100 -10.4 -4.87803 | opp_overlap 811051 811046, overlap 811046 CTCTGAATAAGAAAA CCCGCT CTAA AGCGGG TTTTCTTTGAAACTA gatB 812576 - 811089 - | aspartyl/glutamyl-tRNA amidotransferase subunit B gatA 814054 - 812576 - | aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A TERM 948 813585 - 813559 - G 86 -11.6 -3.25088 | overlap 813551 813561 TGGCAAACGGAGCAA GATCTGCTGCTA CAG CAGCAGCAGAAC CACCCGATGAACCGC TERM 949 813583 - 813561 - G 95 -12.8 -3.18776 | overlap 813559 813551 GCAAACGGAGCAAGA TCTGCTGCTA CAG CAGCAGCAGA ACCACCCGATGAACC gatC 814418 - 814107 - | aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C mreB 814549 - 815589 + | rod shape-determining protein mreC 815608 - 816465 + | rod shape-determining protein mreD 816500 - 816943 + | rod shape-determining protein ACIAD0829 816946 - 817497 + | putative Maf-like protein cafA 817525 - 818991 + | ribonuclease G, endoribonuclease G (cytoplasmic axial filament protein ) ACIAD0831 819128 - 819301 + | hypothetical protein TERM 950 819293 - 819327 + T 100 -16 -2.82933 | opp_overlap 819298, overlap 819298 CAGTGTCGTACTGTT AAAAACTAAAGGGCTA ATT TAGCCCTTTAGTTTTA TCTGATAAATTAAAA TERM 951 819322 - 819298 - T 100 -15.9 -4.59773 | opp_overlap 819293 819298 TCGTACTGTTAAAAA CTAAAGGGCTA ATT TAGCCCTTTAG TTTTATCTGATAAAT TERM 952 819298 - 819322 + T 100 -15.9 -4.57755 | opp_overlap 819298, overlap 819293 TCGTACTGTTAAAAA CTAAAGGGCTA ATT TAGCCCTTTAG TTTTATCTGATAAAT wax-dgaT 820736 - 819360 - | bifunctional wax ester synthase/acyl-CoA; diacylglycerol acyltransferase TERM 953 820879 - 820896 + r 100 -7 -5.87688 | opp_overlap 820879 AGTACATAAAAAAAA CCACTG CAATAA CAGTGG TTTTTTTTAAATTAT TERM 954 820896 - 820879 - R 100 -7.7 -6.0427 | opp_overlap 820879 AGTACATAAAAAAAA CCACTGC AATA ACAGTGG TTTTTTTTAAATTAT cysH 821657 - 820908 - | phosphoadenosine phosphosulfate reductase ACIAD0834 821840 - 822457 + | phosphoserine phosphatase TERM 955 822497 - 822469 - T 100 -14.8 -3.85159 | opp_overlap 822469 822476, overlap 822476 GTAAAAACTGAATAA TAAAAAAGGCGC TAAAT GCGCCTTTTTTA TTTGAATCCAGCCTA TERM 956 822469 - 822497 + T 100 -14.8 -3.6502 | opp_overlap 822469 822476, overlap 822476 GTAAAAACTGAATAA TAAAAAAGGCGC TAAAT GCGCCTTTTTTA TTTGAATCCAGCCTA TERM 957 822476 - 822490 + T 95 -8.5 -5.65927 | opp_overlap 822476 822469, overlap 822469 CTGAATAATAAAAAA GGCGC TAAAT GCGCC TTTTTTATTTGAATC TERM 958 822490 - 822476 - T 95 -8.5 -5.64873 | opp_overlap 822469 822476, overlap 822469 CTGAATAATAAAAAA GGCGC TAAAT GCGCC TTTTTTATTTGAATC ACIAD0835 823976 - 822510 - | putative long-chain fatty acid transport protein ACIAD0836 824184 - 824035 - | hypothetical protein ACIAD0837 825299 - 824367 - | hypothetical protein ACIAD0838 826262 - 825453 - | hypothetical protein TERM 959 825766 - 825782 + g 73 -5.9 -4.45738 | GGAAGTAGGTTGACC CAGAAAC GGT GTTTTTG TTTCTTCTTCAGCTC TERM 960 827162 - 827185 + G 71 -6.7 -4.23674 | TGACCAAAACTGATG GTGATGCAC GCGGTG GTGCAGCAC TTTCTGTTCGTGCAA ffh 826408 - 827820 + | GTP-binding signal recognition particle protein TERM 961 827848 - 827862 + T 93 -8.5 -4.76644 | opp_overlap 827848 AGTTAAACTCAAAAA GGCGC TTGAT GCGCC TTTTTCGTGGATATT TERM 962 827862 - 827848 - T 93 -8.5 -4.81851 | opp_overlap 827848 AGTTAAACTCAAAAA GGCGC TTGAT GCGCC TTTTTCGTGGATATT ACIAD0840 828619 - 827888 - | pantothenate kinase ACIAD0841 829387 - 828626 - | putative biotin--[acetyl-CoA-carboxylase] synthetase TERM 963 828940 - 828965 + g 86 -10.5 -3.85698 | TGATTGCCTGATCGG TGTCGTGATGT TCTG GCGTCACGACA TTTATGCCGACACCA ACIAD0842 829418 - 830221 + | hypothetical protein TERM 964 830322 - 830312 - g 71 -4 -4.77719 | CAAAATGCAATAAAA TTGT TAG ACAA TGACATAGTCAAGAA ACIAD0843 830291 - 830422 + | hypothetical protein ACIAD0844 830419 - 831126 + | GntR family transcriptional regulator TERM 965 834608 - 834594 - g 72 -10 -2.78216 | overlap 834591 TACTGGGAGTAACGA TGCCAG AAC CTGGCA CCTCAAAACTGGTTA ACIAD0846 831224 - 834673 + | putative chromosome segregation ATPase TERM 966 835044 - 835033 - g 84 -3.6 -5.47914 | AAAAATTAGAAAAAA CGGC TGAG ACCG ATGAGAAGACAAAAC ACIAD0847 834675 - 835652 + | putative cell division protein (ZipA-like) TERM 967 835692 - 835709 + F 100 -12.7 -4.59027 | opp_overlap 835688 AACAAGATAAGTTTA GGGCGGA CGTT TCCGCCC TTTTATATGGTGATT ligA 835730 - 837760 + | DNA ligase TERM 968 837859 - 837830 - T 84 -5.7 -5.52909 | opp_overlap 837830 TAAGATTTAAAAAAA CTAAGAGGCGGTC TATA AATTGCCTCTTAG TTTTAATCTGAAGAA TERM 969 837830 - 837859 + T 93 -9.4 -4.34402 | opp_overlap 837830 TAAGATTTAAAAAAA CTAAGAGGCGGT CTATAA ATTGCCTCTTAG TTTTAATCTGAAGAA ACIAD0849 838958 - 837903 - | putative dehydrogenase ACIAD0850 839089 - 839664 + | hypothetical protein ACIAD0851 839668 - 839868 + | hypothetical protein bfrA 840124 - 840588 + | bacterioferritin TERM 970 840625 - 840606 - f 74 -6.4 -4.44915 | opp_overlap 840608, overlap 840608 TAATTATTGACAAAA GACTCAGC TTCG GCTGAGTT TTTTATGCATATTAT TERM 971 840623 - 840608 - f 79 -9 -3.82519 | opp_overlap 840608, overlap 840606 ATTATTGACAAAAGA CTCAGC TTCG GCTGAG TTTTTTATGCATATT TERM 972 840608 - 840623 + F 95 -9 -5.30686 | opp_overlap 840608 840606 ATTATTGACAAAAGA CTCAGC TTCG GCTGAG TTTTTTATGCATATT ACIAD0853 840816 - 841574 + | hypothetical protein bcp 842217 - 841642 - | bacterioferritin comigratory protein ACIAD0855 842318 - 843076 + | putative hydrolase, biotin biosynthesis (BioH) TERM 973 844428 - 844410 - g 85 -6 -5.1848 | opp_overlap 844409 844410 AATTAATCCAAAAAA TGATGAAC GTG GTTCGTCA ACTTTCTTGTGAGGC bioA 843134 - 844462 + | adenosylmethionine-8-amino-7-oxononanoate aminotransferase bioF 844449 - 845606 + | 8-amino-7-oxononanoate synthase ACIAD0858 845597 - 846364 + | putative biotin biosynthesis protein (BioC) bioD 846361 - 847002 + | dithiobiotin synthetase TERM 974 847019 - 847007 - T 71 -3.4 -5.1615 | CTAAGATTTAAAAAA GACA GACTA TGTC TTAGAAAAGGTTTTA TERM 975 847050 - 847028 - T 100 -12.2 -4.37886 | opp_overlap 847028 CTATGTCTTAGAAAA GGTTTTATTC AAT GAATAAAACC TTTTCGTAAATAAAG TERM 976 847028 - 847050 + T 100 -12.2 -4.2828 | opp_overlap 847028 CTATGTCTTAGAAAA GGTTTTATTC AAT GAATAAAACC TTTTCGTAAATAAAG ACIAD0860 848185 - 847070 - | hypothetical protein TERM 977 847177 - 847164 - G 74 -6.7 -4.32034 | TCATTATTATCAAAA CCATC TTTA GATGG TATACCATAGTCAGA TERM 978 848277 - 848296 + r 100 -10.8 -4.75174 | opp_overlap 848277 CAATTTAATAAAAAA GAGTTCAC AAAA GTGAACTC TTTTTAGGTTACATA TERM 979 848296 - 848277 - R 100 -10.8 -5.5074 | opp_overlap 848277 CAATTTAATAAAAAA GAGTTCAC AAAA GTGAACTC TTTTTAGGTTACATA ACIAD0861 849262 - 848321 - | putative ribosomal large subunit pseudouridine synthase B (pseudouridylate synthase) (Uracil hydrolyase) ACIAD0862 849894 - 849304 - | hypothetical protein ACIAD0863 850682 - 849891 - | hypothetical protein ACIAD0864 850965 - 851669 + | putative acetyltransferase ACIAD0865 852332 - 851697 - | hypothetical protein ACIAD0866 853078 - 852416 - | hypothetical protein ACIAD0868 853175 - 853735 + | hypothetical protein rpmF 853807 - 853992 + | 50S ribosomal protein L32 TERM 980 854054 - 854037 - f 89 -6.9 -5.31456 | opp_overlap 854038, overlap 854038 TTAATGTAGAAAAAA TGGGAGC GAAA GCTCCCT TTTTTTGTTGTTTTT TERM 981 854053 - 854038 - f 87 -10.4 -3.77789 | opp_overlap 854038, overlap 854037 TAATGTAGAAAAAAT GGGAGC GAAA GCTCCC TTTTTTTGTTGTTTT TERM 982 854038 - 854053 + F 100 -10.4 -6.04419 | opp_overlap 854038 854037 TAATGTAGAAAAAAT GGGAGC GAAA GCTCCC TTTTTTTGTTGTTTT TERM 983 854738 - 854761 + G 78 -8.8 -3.76952 | AGGCAAAAGAGCAGT CGGGCAAAGC CATT GCATTGCCTG TTTCGGTTCCATCAC fabD 854146 - 855132 + | malonyl-CoA-[acyl-carrier-protein] transacylase TERM 984 855791 - 855811 + G 73 -8.3 -3.72742 | AAATGCGGTAAGTTT CTTGGCTTC TGA GAAGGCAAG TTATATTACTGGTAC fabG 855129 - 855863 + | 3-oxoacyl-[acyl-carrier-protein] reductase acpP 855841 - 856185 + | acyl carrier protein (ACP) TERM 985 856219 - 856206 - f 90 -8.1 -4.89393 | opp_overlap 856206 CAAAGTTGATAAAAA CCACC TTAT GGTGG TTTTTTTATGCCTGA TERM 986 856206 - 856219 + F 93 -8.1 -5.64274 | opp_overlap 856206 CAAAGTTGATAAAAA CCACC TTAT GGTGG TTTTTTTATGCCTGA ACIAD0873 856374 - 856850 + | hypothetical protein ACIAD0874 858085 - 856853 - | putative phage related protein TERM 987 857391 - 857428 + g 81 -7.3 -4.62302 | gap 1, opp_overlap 857391 857405 TCTAAATCTAATTGA TTTGCTTGAGAGAATTTT AAA AAAATACTTTCA-GCAAA TTTTTCCAAATCTTC thiD 858939 - 858160 - | bifunctional hydroxy-methylpyrimidine kinase/hydroxy-phosphomethylpyrimidine kinase ACIAD0876 859037 - 859711 + | putative hydrolase TERM 988 859724 - 859749 + F 75 -4.8 -4.92783 | TAATTTATAATGAAA GACAGGTTTA CACATT TGAATCTGTC TTTTTATAATCCATT ACIAD0877 859872 - 860993 + | putative acyltransferase TERM 989 860996 - 860978 - T 84 -6.7 -5.05782 | opp_overlap 860978 ATGGATGGTAAAAAA GCCTCAA ATGGA CTGAGGC TTAATGCTGTGTAAC ACIAD0878 861470 - 861018 - | hypothetical protein TERM 990 861715 - 861738 + r 79 -8.2 -3.98661 | opp_overlap 861715, overlap 861718 ACCTAAATTAAAAAA TAAGCGGAAA TATA TATCCGCTTA TTTGTAATGGATGTA TERM 991 861738 - 861715 - R 90 -8.2 -5.38497 | opp_overlap 861715 861718 ACCTAAATTAAAAAA TAAGCGGAAA TATA TATCCGCTTA TTTGTAATGGATGTA fabB 863018 - 861789 - | beta-ketoacyl-ACP synthase I (3-oxoacyl-[acyl-carrier-protein] synthase I) ACIAD0880 863318 - 864703 + | hypothetical protein TERM 992 864769 - 864803 + F 85 -9.4 -3.97043 | GTGCAATCCAAGGGC TGGTCAACATTTGC TAATGAT GCCGATGTTGACCA TTCTTGTATCTTGGC TERM 993 864833 - 864861 + F 100 -11.9 -4.8622 | CTTACAATTGCATGC CCTCAAAAAGAGG TGT TTTCTTTTTGAGG TTTTTAATTAACGGG TERM 994 865041 - 865020 - g 73 -2.9 -5.13473 | opp_overlap 865020 ACTACACCTAAAAAA CCTAACTCA GCTA TGCGTAAGG TTTGCCGTGTTCGCT rpsL 864888 - 865262 + | 30S ribosomal protein S12 rpsG 865423 - 865893 + | 30S ribosomal protein S7 TERM 995 866010 - 866036 + F 87 -10.2 -3.71913 | overlap 866008 866013 TCTGTTTGGATATTT GTGCGCATCAAT TTG ATTGATGCGTCC TGTTTTAAATATAAC TERM 996 866013 - 866033 + F 86 -12.7 -2.95483 | overlap 866010 866008 GTTTGGATATTTGTG CGCATCAAT TTG ATTGATGCG TCCTGTTTTAAATAT fusA 866071 - 868209 + | elongation factor G TERM 997 868286 - 868252 - f 70 -4.3 -4.66163 | opp_overlap 868257 868257, overlap 868256 868257 ATTTTTAGTTAAAAA CCAAGCGCTCATGAG CGATC CTCATGAGCAGTTTA TAAAGGAAAAACTCA TERM 998 868282 - 868256 - f 70 -7.3 -3.83042 | opp_overlap 868257 868257, overlap 868252 868257 TTAGTTAAAAACCAA GCGCTCATGAG CGATC CTCATGAGCAG TTTATAAAGGAAAAA TERM 999 868257 - 868282 + F 75 -8.4 -3.85698 | gap 1, opp_overlap 868256 868252 868257, overlap 868257 TAGTTAAAAACCAAG C-GCTCATGAG CGATC CTCATGAGCAG TTTATAAAGGAAAAA TERM 1000 868281 - 868257 - f 81 -10.8 -2.89102 | opp_overlap 868257 868257, overlap 868256 868252 TAGTTAAAAACCAAG CGCTCATGAG CGATC CTCATGAGCA GTTTATAAAGGAAAA tufA 868301 - 869491 + | elongation factor Tu TERM 1001 869526 - 869510 - f 100 -9.3 -5.75342 | opp_overlap 869510 GTGCTCGAAAAAAAA GCGTCCC CTT GGGGCGC TTTTTTTATATCTAC TERM 1002 869510 - 869526 + F 100 -11.5 -5.76633 | opp_overlap 869510 GTGCTCGAAAAAAAA GCGTCCC CTT GGGGCGC TTTTTTTATATCTAC ACIAD0886 869748 - 870629 + | putative metal-dependent hydrolase TERM 1003 870648 - 870664 + F 100 -12.3 -5.52384 | CAAATTTTTAGCGCA GAGCAGC TAA GCTGCTC TTTTTTTAATAGACG rimI 870782 - 871240 + | ribosomal-protein-alanine acetyltransferase (acetylating enzyme for N-terminal of ribosomal protein S18) ACIAD0888 872062 - 871247 - | arginyl-tRNA-protein transferase aat 872812 - 872087 - | leucyl/phenylalanyl-tRNA--protein transferase TERM 1004 872854 - 872832 - R 100 -9.2 -5.03994 | opp_overlap 872832 GGGGAGATATAAAAA GATCGGCT TCATTTT AGCCGATC TTTTTTATAGGATGA TERM 1005 872832 - 872854 + r 100 -9.2 -5.26316 | opp_overlap 872832 GGGGAGATATAAAAA GATCGGCT TCATTTT AGCCGATC TTTTTTATAGGATGA TERM 1006 872900 - 872884 - R 71 -6.7 -4.08763 | AGAATAAATATTAAA TTTAGAT GCT ATCTAAA TAAAAATCTGCGTCC trxB 873832 - 872885 - | thioredoxin reductase 1 TERM 1007 874136 - 874146 + G 70 -2.6 -5.04222 | overlap 874128 ATGCACAGCGATTAT TAAT CAC ATTA TTTTTGGTTTCGTTC TERM 1008 877038 - 877050 + G 70 -7.7 -3.67417 | AGCATCGACATCATC CTTGC AGC GCAAG TTTAGCCTTGGCTAT ACIAD0891 874099 - 877155 + | putative cell division protein, required for chromosome partitioning (FstK) TERM 1009 877159 - 877195 + T 80 -11.1 -2.54325 | opp_overlap 877160 877163 877170, overlap 877170 ATACTGGTCTAGACC ATAATAAAAAACCTGCA TCA TGCAGGTTTTTTATCAA ATGTATTTAAGCAAA TERM 1010 877194 - 877160 - T 100 -16.8 -2.62396 | opp_overlap 877159 877170, overlap 877163 877170 TACTGGTCTAGACCA TAATAAAAAACCTGCA TCA TGCAGGTTTTTTATCA AATGTATTTAAGCAA TERM 1011 877191 - 877163 - T 100 -16.3 -3.46602 | opp_overlap 877159 877170, overlap 877160 877170 TGGTCTAGACCATAA TAAAAAACCTGCA TCA TGCAGGTTTTTTA TCAAATGTATTTAAG TERM 1012 877184 - 877170 - T 100 -10 -5.58179 | opp_overlap 877159 877170, overlap 877163 877160 GACCATAATAAAAAA CCTGCA TCA TGCAGG TTTTTTATCAAATGT TERM 1013 877170 - 877184 + T 100 -10 -5.26918 | opp_overlap 877170 877163 877160, overlap 877159 GACCATAATAAAAAA CCTGCA TCA TGCAGG TTTTTTATCAAATGT ACIAD0892 877489 - 877202 - | hypothetical protein minE 878007 - 877735 - | cell division topological specificity factor (reverses minC inhibition of FtsZ ring) minD 878846 - 878010 - | cell division inhibitor, a membrane ATPase,activates minC minC 879611 - 878889 - | cell division inhibitor, inhibits ftsZ ring formation ACIAD0896 880586 - 879735 - | hypothetical protein TERM 1014 880325 - 880309 - G 70 -2.9 -5.06816 | overlap 880310 ACTTGGTAATAAAAA CGACCAC GCT GTAGCCA TGAGGCGGGAATGAT TERM 1015 880731 - 880713 - R 88 -7.5 -4.84527 | opp_overlap 880713 GTCATAGATCAAAAA TAGCTTG AATGA CAAGCTA TTTGGATCCAGGTGA TERM 1016 880713 - 880731 + r 71 -7.5 -3.65351 | opp_overlap 880713 GTCATAGATCAAAAA TAGCTTG AATGA CAAGCTA TTTGGATCCAGGTGA ACIAD0897 881724 - 880798 - | putative phospholipid/glycerol acyltransferase ACIAD0898 881975 - 882628 + | putative outer membrane protein TERM 1017 882670 - 882645 - f 72 -9.1 -2.52464 | opp_overlap 882651 882668, overlap 882651 CGTCGCGTGAATTTA CAAAAACCACC TTCG GGTGGTTTTTT TATGAGTAAAATCCC TERM 1018 882651 - 882664 + F 93 -8.1 -5.64274 | opp_overlap 882645 882651 GTGAATTTACAAAAA CCACC TTCG GGTGG TTTTTTTATGAGTAA TERM 1019 882664 - 882651 - f 90 -8.1 -4.91712 | opp_overlap 882651, overlap 882645 GTGAATTTACAAAAA CCACC TTCG GGTGG TTTTTTTATGAGTAA rep 882754 - 884793 + | ATP-dependent DNA helicase dut 884818 - 885270 + | deoxyuridine 5'-triphosphate nucleotidohydrolase TERM 1020 885287 - 885312 + F 100 -12.1 -4.29227 | opp_overlap 885287 885291, overlap 885291 CCAAATTGTTGAAAA TAAATGTCTGT GTTA ACAGACATTTA TTTATTAGTAATTGA TERM 1021 885312 - 885287 - f 100 -12.1 -4.12942 | opp_overlap 885287 885291, overlap 885291 CCAAATTGTTGAAAA TAAATGTCTGT GTTA ACAGACATTTA TTTATTAGTAATTGA TERM 1022 885308 - 885291 - f 93 -8.5 -4.65263 | opp_overlap 885291 885287, overlap 885287 ATTGTTGAAAATAAA TGTCTGT GTTA ACAGACA TTTATTTATTAGTAA TERM 1023 885291 - 885308 + F 93 -8.5 -4.70887 | opp_overlap 885287 885291, overlap 885287 ATTGTTGAAAATAAA TGTCTGT GTTA ACAGACA TTTATTTATTAGTAA TERM 1024 885825 - 885803 - g 72 -9.2 -3.19921 | overlap 885794 885819 AGACAATGGCATTAA GTGGCTCATT GAT AACGAACCAC CATCACCAGAGATGA TERM 1025 886709 - 886729 + G 79 -8.3 -4.24123 | opp_overlap 886701, overlap 886701 TAAAATTGATGGTAT CCGTCTTGA TTT TGAAGACGG TTTTGGCATTATTCG algC 885462 - 886886 + | phosphomannomutase TERM 1026 887019 - 887034 + G 70 -7.6 -3.59087 | TGCCATGACAGATCC TGAGCT TGAA AGCTCA TTTGCCCGTGATATT argB 886897 - 887808 + | acetylglutamate kinase TERM 1027 887836 - 887852 + F 93 -7.3 -5.76949 | opp_overlap 887836 TACATATATCAAAAA GATCACG GAA TGTGATC TTTTTTTTGGCAATA TERM 1028 887852 - 887836 - f 83 -6.6 -4.86133 | opp_overlap 887836 TACATATATCAAAAA GATCAC GGAAT GTGATC TTTTTTTTGGCAATA ACIAD0904 887884 - 888714 + | hypothetical protein TERM 1029 889570 - 889558 - g 74 -7.7 -3.94188 | AGCCAGGTGAAATAA TCCTG TTT CAGGA TGGACGTCCTGTAAA ACIAD0905 888813 - 889670 + | putative glutamine amidotransferase TERM 1030 889800 - 889813 + G 78 -5.9 -4.87803 | TATCACGATGGTTAT CGCCG CTCA TGGCG TTTTGTTTAAGCCTA TERM 1031 890038 - 890065 + G 75 -5.6 -4.58395 | gap 1, overlap 890038 CAGATGGCGACTGGT GG-GATGGATGGC CGT GACATTCATCGCC TTTTTGGCAGGTGGA ACIAD0907 889766 - 890854 + | hypothetical protein TERM 1032 890895 - 890868 - g 82 -8.4 -4.36411 | overlap 890859 GAGTAACCAGCAAAA TGTCTGGGTGGC TTAT GCAACGCAGACA CAACAGTTTCATATC ACIAD0908 890851 - 891162 + | hypothetical protein TERM 1033 891177 - 891200 + T 100 -9.6 -5.47821 | opp_overlap 891181, overlap 891181 ATGCACTTAATAAGA AAAACCCCTC TGCT GAGGGGTTTA TTTTTTTGCATAAGT TERM 1034 891181 - 891196 + T 100 -10.4 -5.21683 | opp_overlap 891181, overlap 891177 ACTTAATAAGAAAAA CCCCTC TGCT GAGGGG TTTATTTTTTTGCAT TERM 1035 891196 - 891181 - T 100 -10.4 -5.30348 | opp_overlap 891181 891177 ACTTAATAAGAAAAA CCCCTC TGCT GAGGGG TTTATTTTTTTGCAT smpA 891616 - 891218 - | outer membrane lipoprotein fur 891728 - 892168 + | negative regulator of ferric iron uptake TERM 1036 892220 - 892185 - T 100 -16.4 -3.94344 | opp_overlap 892189 892194, overlap 892188 892194 ATCACATAAATACAA CAATTAAAAGAGGGCA AAAT TGCCCTCTTTTATTTG AGATTACGGCGTTGA TERM 1037 892217 - 892188 - T 100 -12.3 -4.0777 | opp_overlap 892189 892194, overlap 892185 892194 ACATAAATACAACAA TTAAAAGAGGGCA AAAT TGCCCTCTTTTAT TTGAGATTACGGCGT TERM 1038 892189 - 892216 + T 100 -15.8 -3.66178 | opp_overlap 892188 892185 892194, overlap 892194 CATAAATACAACAAT TAAAAGAGGGCA AAAT TGCCCTCTTTTA TTTGAGATTACGGCG TERM 1039 892211 - 892194 - T 100 -11.3 -4.60317 | opp_overlap 892189 892194, overlap 892188 892185 ATACAACAATTAAAA GAGGGCA AAAT TGCCCTC TTTTATTTGAGATTA TERM 1040 892194 - 892211 + T 100 -11.3 -4.90525 | opp_overlap 892194 892188 892185, overlap 892189 ATACAACAATTAAAA GAGGGCA AAAT TGCCCTC TTTTATTTGAGATTA pilU 893365 - 892214 - | twitching motility protein TERM 1041 893118 - 893129 + g 78 -2.2 -5.4477 | TGAAATGCGCTCACC CGGA AACG TTCG TTTTTTTCACGATTT pilT 894436 - 893402 - | twitching motility protein ACIAD0913 894546 - 895250 + | hypothetical protein ACIAD0914 895387 - 896244 + | putative undecaprenol kinase 2 (bacitracin resistance protein 2) TERM 1042 896287 - 896265 - T 74 -9.2 -3.049 | opp_overlap 896265, overlap 896262 CAAGCTAAATAATTA CGAGGGAA ATTTATG TTCCCTCG TTTAAAAATTAAAAA TERM 1043 896265 - 896287 + T 80 -9.2 -3.60792 | opp_overlap 896265 896262 CAAGCTAAATAATTA CGAGGGAA ATTTATG TTCCCTCG TTTAAAAATTAAAAA ACIAD0915 897125 - 896340 - | putative transglutaminase-like enzyme TERM 1044 896405 - 896393 - G 72 -7.7 -3.86822 | opp_overlap 896394 CAATCTCGCCATAAA CCGTT GCA AACGG AACGTCTTTGGCATC sbcC 900932 - 897336 - | ATP-dependent dsDNA exonuclease (suppression of recBC) TERM 1045 898529 - 898541 + g 81 -4.1 -5.30616 | ATAACTTGAGTTGCT GATCA TGT TGGTC TTTTTGTTTGAGTAG TERM 1046 899339 - 899349 + g 81 -4 -5.26875 | ATTGACTTTGCAGAG TGAA CAT TTCA TTTTTTAATTCAAAA TERM 1047 900301 - 900313 + g 71 -3.4 -5.00616 | TTTTCACGCTGTAAT CGAA CTTCT TTCG TTTTTTCAAAAGCCA sbcD 902192 - 900942 - | ATP-dependent dsDNA exonuclease (suppression of recBC) ACIAD0918 902316 - 902789 + | hypothetical protein ACIAD0919 903437 - 902868 - | hypothetical protein TERM 1048 903270 - 903297 + g 71 -2 -5.12707 | overlap 903273 903273 TTGTTCTTGATAAAC TAATTTTGTTCC TATT GGAACACGAATA TTTTTTACAATTTGA TERM 1049 903581 - 903548 - H 95 -9 -5.20328 | GCTTAAAAAAATAAA GACCGACGATTC GAGTGATGAT AAATCGTCGGTC AAAAACTTTAGAACA TERM 1050 903627 - 903587 - H 76 -6.3 -4.56775 | ATCGTCGGTCAAAAA CTTTAGAACAGGTTTGGCT GCT AACAAAACATATCCTAAAG TGGATGTCATAATGA ACIAD0920 903793 - 904248 + | hypothetical protein TERM 1051 904324 - 904314 - f 71 -5.4 -4.64598 | TAATGACTTTAAAAA GATG AAT CATC ATGTCGCAACAATTT ACIAD0921 904315 - 905226 + | hypothetical protein ACIAD0922 906344 - 905229 - | putative D-amino acid oxidase TERM 1052 906005 - 906021 + g 100 -8.7 -5.13521 | GATAGCTGGCGTGTT GCATCGG CTC TCGATGC TTTTTTGCGTAATTT hemB 907430 - 906369 - | delta-aminolevulinic acid dehydratase TERM 1053 906514 - 906467 - G 76 -7.8 -4.14739 | gap 1, opp_overlap 906504, overlap 906455 906468 906472 906482 TCAGTGATTCTAAAA TCACACTGTCAGATAGCCATCCA TTC TGGATGGC-ACCTGCCAACATGG CATATTCACCACTGA TERM 1054 906513 - 906468 - G 84 -11.3 -3.08522 | gap 1, opp_overlap 906504, overlap 906455 906467 906472 906482 CAGTGATTCTAAAAT CACACTGTCAGATAGCCATCCA TTC TGGATGGC-ACCTGCCAACATG GCATATTCACCACTG TERM 1055 906509 - 906472 - G 79 -10.7 -3.10537 | gap 1, opp_overlap 906504, overlap 906468 906467 906482 GATTCTAAAATCACA CTGTCAGATAGCCATCCA TTC TGGATGGC-ACCTGCCAA CATGGCATATTCACC TERM 1056 906500 - 906482 - G 91 -13.2 -2.89191 | overlap 906472 906468 906467 TCACACTGTCAGATA GCCATCCA TTC TGGATGGC ACCTGCCAACATGGC ACIAD0924 907492 - 907989 + | hypothetical protein TERM 1057 907995 - 908013 + T 89 -7.5 -5.30686 | opp_overlap 907993 907995 TGCATTTTAAAAATA TAGGAGA AAAAA TCTCCTA TTTTTTATAGCTATT TERM 1058 908013 - 907995 - T 76 -7.5 -3.92746 | opp_overlap 907995, overlap 907993 TGCATTTTAAAAATA TAGGAGA AAAAA TCTCCTA TTTTTTATAGCTATT ACIAD0925 908216 - 908094 - | hypothetical protein emrA 908317 - 909453 + | multidrug resistance secretion protein emrB 909460 - 911007 + | major facilitator superfamily multidrug resistance protein TERM 1059 911020 - 911051 + F 76 -9.6 -2.85047 | opp_overlap 911023, overlap 911019 911017 TAAGCATTTTTTTAC CAAGCGTTATGACA TCAA TGTGATAATGCTTG ATCTATTTTTTTAAA TERM 1060 911228 - 911242 + G 73 -2.8 -5.22039 | GCAAAAAAAATATTT CCTC ATTCTGG GAGG TTTTTTAAGTTTAGG ggt 911211 - 913172 + | gamma-glutamyltranspeptidase precursor TERM 1061 913238 - 913187 - T 85 -12 -3.07816 | opp_overlap 913204, overlap 913191 913204 GTTTCAGGCATTTAA TTTAGATCAATAAAAAAGCTGCAA GTTA TTGCAGCTTTTTTATTTATATCAA ATTGGACTTCGCTCT TERM 1062 913234 - 913191 - T 86 -12.8 -2.55213 | opp_overlap 913204, overlap 913187 913204 CAGGCATTTAATTTA GATCAATAAAAAAGCTGCAA GTTA TTGCAGCTTTTTTATTTATA TCAAATTGGACTTCG TERM 1063 913221 - 913204 - T 100 -9.9 -5.5353 | opp_overlap 913204, overlap 913191 913187 TAGATCAATAAAAAA GCTGCAA GTTA TTGCAGC TTTTTTATTTATATC TERM 1064 913204 - 913221 + T 100 -9.9 -5.76237 | opp_overlap 913204 913191 913187 TAGATCAATAAAAAA GCTGCAA GTTA TTGCAGC TTTTTTATTTATATC glpK 914717 - 913230 - | glycerol kinase TERM 1065 914803 - 914813 + r 71 -5.4 -4.63542 | opp_overlap 914803 TCATTTGGTTATAAA TTGC ATA GCAA TTTTTCAGGGTTGTG TERM 1066 914969 - 914982 + r 79 -8.1 -3.93236 | AAACTTACGCTCTAG CTGCC TAAG GGCAG TTTGTCCGCTTCCTA TERM 1067 915228 - 915245 + r 93 -7.7 -5.59534 | opp_overlap 915221 915228 TACTTAAATAAATCA GCCGCTT ACTA AAGTGGC TTTTTTATTGTCATT TERM 1068 915328 - 915312 - R 73 -3.6 -5.09245 | opp_overlap 915312 915313, overlap 915313 TTAAAATGATAAAAA GGGCAC GTTAA GTGCCA TTTGAAGTATTGAAT TERM 1069 915338 - 915356 + r 70 -4.6 -4.79451 | opp_overlap 915338 GTGCCATTTGAAGTA TTGAATTG CGC CATTTCAA TTTTATGTTTACCGT ACIAD0931 916092 - 915460 - | hypothetical protein TERM 1070 916342 - 916324 - g 100 -14.6 -2.52464 | CGCTGGTGTAACTCA GGTGGCTG TGG CAGCCACC ACCACAGCAACAGAA ACIAD0932 916256 - 916531 + | hypothetical protein TERM 1071 916547 - 916582 + F 85 -12.1 -3.09635 | TCCATTCACTCATGG ATGATGTCGATCTAA CATCTA TTAGATCGACATCAG TTCAATGATAGGAGT ACIAD0933 916604 - 917467 + | hypothetical protein ACIAD0934 917418 - 918176 + | hypothetical protein TERM 1072 918216 - 918202 - g 70 -2.8 -4.91511 | overlap 918203 AGCGCATCACAAAAA GGATCT TTT AGATCA GGTGAATAATCCTGT TERM 1073 918443 - 918431 - g 71 -3.4 -5.00895 | TTGATCAGACAAAAA TCAC GTTTG GTGA GTATGAGTGAACTCT ACIAD0935 918173 - 918793 + | RNA polymerase sigma factor ACIAD0936 918787 - 918966 + | hypothetical protein TERM 1074 919265 - 919237 - T 87 -10.4 -3.786 | opp_overlap 919237, overlap 919230 CTATAAAATTTTAAA GAGCCTTTAGAC ATTAA GTTTAAAGGCTC TTTTGATTGTCTAAA TERM 1075 919237 - 919265 + T 100 -12.6 -4.53034 | opp_overlap 919230 919237 CTATAAAATTTTAAA GAGCCTTTAGAC ATTAA GTTTAAAGGCTC TTTTGATTGTCTAAA ACIAD0937 919973 - 919314 - | hypothetical protein ACIAD0938 920096 - 920200 + | hypothetical protein TERM 1076 920544 - 920574 + F 83 -11.2 -2.674 | opp_overlap 920549, overlap 920549 AGCTAAACTAAGAGT AAAAAGCCCCGACA TCC TGTCGAGGCTTTTC GTATTTGCGTCTTAG TERM 1077 920549 - 920569 + F 100 -11.1 -4.50358 | opp_overlap 920549, overlap 920544 AACTAAGAGTAAAAA GCCCCGACA TCC TGTCGAGGC TTTTCGTATTTGCGT TERM 1078 920569 - 920549 - f 100 -13.3 -4.90136 | opp_overlap 920549 920544 AACTAAGAGTAAAAA GCCCCGACA TCC TGTCGAGGC TTTTCGTATTTGCGT TERM 1079 921385 - 921365 - g 77 -8.3 -4.07568 | overlap 921366 TCTGGGTCCGCAAAA CGCTAAGCT CCA AGCTCAGCA ACTTCAATATCTGCG TERM 1080 921384 - 921366 - g 71 -9.6 -3.04398 | overlap 921365 CTGGGTCCGCAAAAC GCTAAGCT CCA AGCTCAGC AACTTCAATATCTGC TERM 1081 921725 - 921739 + G 73 -10 -2.96873 | opp_overlap 921723, overlap 921722 TAAAATCAATGCACT CCCGAT CAA ATCGGG TGATTTGCTCAACCT TERM 1082 922337 - 922315 - g 91 -8.5 -4.58395 | gap 1 TTCAGCGCCGAAAAA CAGCA-GGCT GGAA AGCCATGCTG GATCATACCGAATAT ACIAD0939 921123 - 922922 + | putative hemolysin activator protein TERM 1083 923148 - 923134 - g 70 -5.7 -4.35483 | GGTCATGACAACAAA GCTTG TAGCG CAAGC GATTCAGACAGCATG TERM 1084 923222 - 923236 + G 73 -8.6 -3.62354 | overlap 923221 TTGCCGTGATCAGTG TACTGG GTG CCAGTA TCTTTACTTTGCCCC TERM 1085 928295 - 928278 - g 70 -7.7 -3.67173 | overlap 928279 ACAAACGCTCAATAA CCTGTCG AATC CGACAGA CTACACTAGTCAAGC TERM 1086 930629 - 930619 - g 71 -2.4 -5.09225 | ACTTCATCGAAAAAA GGCG TTG CGAC CTATAACAACCGTCA TERM 1087 932600 - 932579 - g 74 -10.2 -2.59564 | overlap 932578 932590 TTGGTATCCCACAAG GTGGAAGC AAAGCA GCTTCCAC TGCACCGAAAGGATC ACIAD0940 923008 - 934143 + | putative hemagglutinin/hemolysin-related protein ACIAD0941 934145 - 934615 + | hypothetical protein TERM 1088 934639 - 934660 + F 83 -7.3 -4.75372 | opp_overlap 934640, overlap 934640 AATTATATTAGTAAA ACCCACTTA AATG TAAGTGGGC TTTTTAATGAGTAGT TERM 1089 934659 - 934640 - f 100 -10.8 -4.33675 | opp_overlap 934640 934639 ATTATATTAGTAAAA CCCACTTA AATG TAAGTGGG CTTTTTAATGAGTAG TERM 1090 934640 - 934659 + F 87 -10.8 -3.445 | opp_overlap 934640, overlap 934639 ATTATATTAGTAAAA CCCACTTA AATG TAAGTGGG CTTTTTAATGAGTAG TERM 1091 935404 - 935415 + G 86 -3 -5.69262 | opp_overlap 935404 AGGAAAATTACAATA TGAT GCAC ATCA TTTTTGTTTTTATAA ACIAD0942 934985 - 935446 + | hypothetical protein ACIAD0943 935521 - 937062 + | phosphoglycerate kinase ACIAD0944 937071 - 937502 + | putative hemolysin ACIAD0945 937499 - 937765 + | hypothetical protein TERM 1092 937813 - 937793 - f 70 -7.1 -3.72784 | opp_overlap 937793 937791 TTTAGAAGAAAGTAA TATTTTATT TTA AATAAAATA TATTTCTTAGCGATG ACIAD0946 937826 - 938071 + | hypothetical protein TERM 1093 938580 - 938565 - g 76 -2.6 -5.2696 | overlap 938567 GGAAAAGGTAAAAAA TCCAAA AAAT TTTGAA ATATGGGAAATGGAT ACIAD0947 938068 - 938910 + | hypothetical protein TERM 1094 939571 - 939549 - g 80 -4.8 -5.20534 | AGGAAGGAAGAAAAA CCAGTGACAT GGA AAGTCAGTGG TCGAGCAAGAGCAAA ACIAD0948 938996 - 940396 + | putative hemagglutinin/hemolysin-related protein TERM 1095 940713 - 940730 + G 78 -7.1 -4.42062 | opp_overlap 940713 ATTTATTTTTAATAA GGATATA GTTT TATATCC TTTATTTCCGACATA ACIAD0949 940402 - 940773 + | hypothetical protein ACIAD0951 940911 - 941063 + | hypothetical protein ACIAD0952 942168 - 941311 - | IS1236 transposase protein 2 TERM 1096 942070 - 942087 + g 76 -7.7 -4.07885 | ATCATTATATTTCTG CGCTAGA TTGG TCTGGCG TTTTCGCCAGGCATA ACIAD0953 942470 - 942177 - | IS1236 transposase protein 1 ACIAD0955 942665 - 943267 + | hypothetical protein TERM 1097 943363 - 943326 - T 82 -11.5 -2.56596 | opp_overlap 943331, overlap 943331 TCCTGCATTAACTTA TAAAACCGAATTCTGTT TTTA AGCAGAATTCGGTTTAA GTGAGATGAATCTGT TERM 1098 943331 - 943358 + T 100 -13.6 -3.65902 | opp_overlap 943331 943326 CATTAACTTATAAAA CCGAATTCTGTT TTTA AGCAGAATTCGG TTTAAGTGAGATGAA TERM 1099 943358 - 943331 - T 100 -11.4 -4.48221 | opp_overlap 943331, overlap 943326 CATTAACTTATAAAA CCGAATTCTGTT TTTA AGCAGAATTCGG TTTAAGTGAGATGAA ACIAD0956 943648 - 943379 - | hypothetical protein TERM 1100 943497 - 943522 + g 70 -7.5 -3.90086 | opp_overlap 943480 943481 GCAGCTTTAGCAGCC GCCTGAGTTGC AGCA GCAGCTTTGGC TTTCGCTTCTTCTTT ACIAD0957 944483 - 943626 - | IS1236 transposase protein 2 TERM 1101 944385 - 944402 + g 76 -7.7 -4.07885 | ATCATTATATTTCTG CGCTAGA TTGG TCTGGCG TTTTCGCCAGGCATA ACIAD0958 944785 - 944492 - | IS1236 transposase protein 1 ACIAD0959 945619 - 944855 - | hypothetical protein TERM 1102 946152 - 946167 + H 72 -2.6 -5.27335 | gap 1, overlap 946152 946155 GATCTACGTAGCTTA GAGTGAG TAA CTCA-TC TTTTTATTTGAACAA TERM 1103 946377 - 946408 + G 72 -6.1 -4.39696 | ATAAGGCTGCTAAAA TTTTGCGTGATAA AACGGA TTATTATGCAAAA TTTCTTACTTTAGAA ACIAD0960 946208 - 947596 + | putative succinate-semialdehyde dehydrogenase [NADP+] (GabD-like) TERM 1104 947606 - 947622 + T 72 -9.5 -2.69528 | opp_overlap 947602, overlap 947602 947601 CTTTAAGTTAATGAT TTGAGCT TCG AGCTCAA TCACTTTCACTTTAA TERM 1105 947673 - 947642 - T 100 -10.3 -5.0538 | opp_overlap 947647, overlap 947647 TTTCACTTTAAAAAA CAAAAGCCAGATC GGTTTT GATCTGGCTTTTT TATATCAGTAATTTT TERM 1106 947668 - 947647 - T 100 -10.2 -5.42198 | opp_overlap 947647, overlap 947642 CTTTAAAAAACAAAA GCCAGATC GGTTTT GATCTGGC TTTTTTATATCAGTA TERM 1107 947647 - 947668 + T 100 -10.9 -5.38047 | opp_overlap 947647 947642 CTTTAAAAAACAAAA GCCAGATCG GTTT TGATCTGGC TTTTTTATATCAGTA ACIAD0961 948011 - 947697 - | hypothetical protein ACIAD0962 948896 - 948144 - | putative MutT/nudix family protein ACIAD0963 950524 - 949007 - | putative nicotinate phosphoribosyltransferase ACIAD0964 951422 - 950541 - | putative ribose-phosphate pyrophosphokinase (phosphoribosyl pyrophosphate synthetase) TERM 1108 951227 - 951243 + g 70 -5.9 -4.36914 | CCTCAATATTCTTTC TGTGTTG TAT CAATACA TTTTCTAAAAGCAAA ACIAD0965 951754 - 953685 + | hypothetical protein TERM 1109 953736 - 953776 + T 77 -10 -3.10975 | opp_overlap 953740 953744, overlap 953744 AAATAGCTTGTTTAA CTTATAAATTGGTCTGCT AAATA AACAGACCAATTTATAAA TCTTAAATGATCAAT TERM 1110 953772 - 953740 - T 87 -13 -2.52543 | opp_overlap 953736 953744, overlap 953744 AGCTTGTTTAACTTA TAAATTGGTCTGCT AAATA AACAGACCAATTTA TAAATCTTAAATGAT TERM 1111 953768 - 953744 - T 85 -9.4 -3.97368 | opp_overlap 953736 953744, overlap 953740 TGTTTAACTTATAAA TTGGTCTGCT AAATA AACAGACCAA TTTATAAATCTTAAA TERM 1112 953744 - 953768 + T 73 -7.2 -3.9777 | opp_overlap 953744 953740, overlap 953736 TGTTTAACTTATAAA TTGGTCTGCT AAATA AACAGACCAA TTTATAAATCTTAAA ACIAD0966 954441 - 953779 - | amino acid transporter LysE iciA 954585 - 955478 + | chromosome replication initiation inhibitor protein ACIAD0968 955566 - 956267 + | GntR family transcriptional regulator ACIAD0969 957033 - 956269 - | iron ABC transporter ATP-binding protein TERM 1113 956452 - 956435 - G 81 -4.1 -5.36441 | TCGGCATATAAAAAA GCAAGAT TTGG ATCATGC ATAATGGCGACAATG ACIAD0970 958053 - 957037 - | iron ABC transporter membrane protein ACIAD0971 959118 - 958057 - | iron ABC transporter periplasmic substrate-binding protein TERM 1114 959109 - 959097 - G 82 -4.9 -5.39721 | TTATCAGATAAAAAA TATTG GGG CAATA ACTCAACACATAATC TERM 1115 959169 - 959192 + H 83 -6.8 -4.86902 | opp_overlap 959165 959169 959174 AAGTCAATTAACTTA TACAATCTTG TGTA CAAGATGGTA TTTTATTGTAATTTA ACIAD0973 959235 - 961349 + | putative ferrichrome-iron receptor protein TERM 1116 961360 - 961380 + T 90 -8.3 -5.09426 | opp_overlap 961360 ATTAAATAGATTAAA CCAGAAGCA TAA TACTTCTGG TTTTTTCAAGTTCAA TERM 1117 961380 - 961360 - T 93 -10.5 -3.97911 | opp_overlap 961360 ATTAAATAGATTAAA CCAGAAGCA TAA TACTTCTGG TTTTTTCAAGTTCAA ACIAD0974 961847 - 961392 - | putative acetyltransferase ACIAD0975 962614 - 963069 + | hypothetical protein TERM 1118 963154 - 963130 - f 81 -5.9 -4.98255 | opp_overlap 963130 GTCTAATTATAAAAA TTTAAACTTCA TAA TTAAGTTTAAA TTAAGTTAGTTTGTC TERM 1119 963233 - 963252 + F 100 -7.8 -6.23545 | CATGAAATACCCTTC GCCACACC CTCA GATGTGGC TTTTTTTTGTTTAAA ACIAD0976 963439 - 963561 + | hypothetical protein ACIAD0977 963641 - 964639 + | putative dioxygenase TERM 1120 964673 - 964700 + F 100 -13.6 -4.82901 | opp_overlap 964678, overlap 964678 CAATCTATAGCAGTA CAAAAGCAGTCT GAGC AGGCTGCTTTTG TTTTTATGACAAAAA TERM 1121 964678 - 964695 + F 89 -7.7 -5.35224 | opp_overlap 964678, overlap 964673 TATAGCAGTACAAAA GCAGTCT GAGC AGGCTGC TTTTGTTTTTATGAC TERM 1122 964695 - 964678 - f 71 -5.5 -4.49981 | opp_overlap 964678 964673 TATAGCAGTACAAAA GCAGTCT GAGC AGGCTGC TTTTGTTTTTATGAC vanR 964806 - 965492 + | ferulate or vanillate catabolism transcriptional regulator TERM 1123 965525 - 965497 - T 100 -10.5 -5.14965 | opp_overlap 965499 ATGCCGAGTAAAAAA CTCCTATACAT GGGCTTA ATGTATAGGAG AAAAACTGAACTTTT vanB 966495 - 965539 - | vanillate O-demethylase oxidoreductase vanA 967574 - 966498 - | vanillate O-demethylase oxygenase subunit (4-hydroxy-3-methoxybenzoate demethylase) TERM 1124 966661 - 966673 + g 74 -7.7 -3.9777 | AGAATATTTTGCTGC TGCTG TTC CAGCA TTTCTAAATCTTCGG ACIAD0981 968396 - 968151 - | hypothetical protein vanK 968383 - 969729 + | MFS superfamily vanillate transporter ACIAD0983 969761 - 971044 + | putative porin for vanillate trafficking (VanP) TERM 1125 971074 - 971113 + T 100 -11 -5.26875 | opp_overlap 971079, overlap 971075 TACATTTAAAATGCT ATAAAGATTAAGTCATGT TAAA GCATGGCTTAATCTTTAG TTTTTTACTTAAACG TERM 1126 971075 - 971112 + T 100 -14.5 -3.75402 | opp_overlap 971079, overlap 971074 ACATTTAAAATGCTA TAAAGATTAAGTCATGT TAAA GCATGGCTTAATCTTTA GTTTTTTACTTAAAC TERM 1127 971108 - 971079 - T 79 -8 -3.97406 | opp_overlap 971075 971074 TTAAAATGCTATAAA GATTAAGTCATG TTAAAG CATGGCTTAATC TTTAGTTTTTTACTT ACIAD0984 972282 - 971137 - | putative hydroxylase involved in salicylate metabolism (SalA-like) ACIAD0985 973354 - 972542 - | putative transcriptional regulator (PcaU-like) ACIAD0986 973629 - 973934 + | putative ferredoxin ACIAD0987 973953 - 974252 + | hypothetical protein ACIAD0988 974261 - 975322 + | putative vanillate O-demethylase oxygenase subunit (VanA-like) fabG 975328 - 976098 + | 3-ketoacyl-(acyl-carrier-protein) reductase ACIAD0990 976109 - 977044 + | putative dioxygenase ACIAD0991 977070 - 978281 + | putative ferredoxin reductase subunit of phenylpropionate dioxygenase ACIAD0992 978348 - 979577 + | major facilitator superfamily permease ACIAD0993 979608 - 980132 + | hypothetical protein TERM 1128 980523 - 980541 + G 80 -10.3 -3.54638 | TGGGCATTCATTAGG GGCACTG CAAGC CAGTGCC TTTGCCCGAAATTAT TERM 1129 980664 - 980648 - g 71 -2.2 -5.19261 | AAATTTATCAAAAAA GACCAA AAATG CTGGCC GAACTTGGGCATCAG ACIAD0994 980194 - 981033 + | putative hydrolase ACIAD0995 981037 - 981831 + | short chain dehydrogenase ACIAD0997 981843 - 982634 + | L-aspartate dehydrogenase TERM 1130 983723 - 983735 + G 78 -5.5 -4.96848 | opp_overlap 983731, overlap 983724 TGACTGAGGGTGAGT TTGCC AAA GGCAG TTTTTATCTGCCAAC ACIAD0998 982648 - 984114 + | putative aldehyde dehydrogenase ACIAD0999 984177 - 985817 + | hypothetical protein TERM 1131 985902 - 985871 - f 83 -7.2 -4.7078 | overlap 985873 GTAATGAGTCAAAAA GATGCTTGATCTGC CAAG GCAGGTCGAGCAGC CTGAAACAGGGGATT TERM 1132 985900 - 985873 - f 79 -8.4 -3.96486 | overlap 985871 AATGAGTCAAAAAGA TGCTTGATCTGC CAAG GCAGGTCGAGCA GCCTGAAACAGGGGA TERM 1133 986381 - 986370 - g 75 -5.8 -4.66163 | opp_overlap 986368 ACCTCTATTGAAAAA GCCT ATGT AGGC TATAAGTTCAATGCC ACIAD1000 986067 - 987266 + | putative signal peptide TERM 1134 987302 - 987333 + F 79 -5.3 -5.0538 | gap 1 AGTACATCAGTTTAT GGCCATAAAATCAG CAGCC CTG-TTTTGTGGTC TTTTTTAAGATGCAA TERM 1135 987729 - 987743 + G 78 -5.7 -4.87665 | opp_overlap 987729 ATCCTCAACAGCAGA TGGCT AATCG AGCCA TTTTTATCGATCCAC ACIAD1001 987410 - 988753 + | putative iron-regulated membrane protein TERM 1136 988765 - 988748 - T 89 -7.1 -5.36441 | CTGGGATATAAAAAA GTTTAAG CCGA CTTAAAC ATGTGAATGGTGTCA ACIAD1002 989241 - 988750 - | GNAT family acetyltransferase TERM 1137 988932 - 988913 - G 73 -10 -2.98866 | overlap 988912 988925 GCATATCCAAATAAG GCCTCACA TAAG CGTGAGGC AAGGCCTTGACGACG TERM 1138 989400 - 989360 - R 100 -8.5 -6.23317 | ATAAAAACAAAAAAA CTCTCAAGATCAATC TAAGTATCAAT GAGTGATCTTGAGAG GGAGTAAAAGATTTA ACIAD1003 991558 - 989420 - | putative ferric siderophore receptor protein TERM 1139 991706 - 991729 + G 78 -5.3 -4.96848 | CGTCATTGTGATCAT GTTGCTCGA TCATGT TCGAGAAAC TTTTTATCTCAACAA ACIAD1004 991629 - 992780 + | hypothetical protein TERM 1140 992819 - 992789 - T 83 -9.9 -3.76373 | opp_overlap 992795, overlap 992792 TTTCTAATATTTAAA TGATAACAGGATC GTGAT GATCCTGTTATAA AGCGCCATATTGCTG TERM 1141 992816 - 992792 - T 84 -11.6 -2.974 | opp_overlap 992795, overlap 992789 CTAATATTTAAATGA TAACAGGATC GTGAT GATCCTGTTA TAAAGCGCCATATTG TERM 1142 992795 - 992813 + T 79 -9.6 -3.28924 | opp_overlap 992792 992789 ATATTTAAATGATAA CAGGATCG TGA TGATCCTG TTATAAAGCGCCATA ACIAD1005 993299 - 992814 - | hypothetical protein ACIAD1006 994655 - 993363 - | major facilitator superfamily permease TERM 1143 994472 - 994453 - G 78 -5.8 -4.82162 | gap 1 GACAATAATATAAAA GGAATCAGT TCA AC-GATTCC AATTAAACCCAGCAT TERM 1144 994694 - 994675 - R 100 -12.2 -5.64304 | opp_overlap 994675 CAAGAGAATAAAAAA GGATGAGC AAGC GCTCATCC TTTTCTTGAAACAGC TERM 1145 994675 - 994694 + r 100 -12.2 -4.63218 | opp_overlap 994675 CAAGAGAATAAAAAA GGATGAGC AAGC GCTCATCC TTTTCTTGAAACAGC mqo 996346 - 994715 - | malate:quinone oxidoreductase TERM 1146 996803 - 996791 - R 71 -6.3 -4.1673 | TAATTGTCTAAGAAA TTCGA TAT TCGAA CATGATGATCGGTAA TERM 1147 996865 - 996845 - R 81 -7.7 -4.35461 | overlap 996849 CGAATATCACTAAAA TTTATGCTG ATG CAACATAAA AAGGTGCATCAGAAC betA 998507 - 996846 - | choline dehydrogenase TERM 1148 996924 - 996945 + g 70 -7.3 -3.8822 | ATCTGCAATTTTCTC TGCCATCAT AATG GTGGTGGCA TTTAGATTTCCTGTA betB 1000068 - 998596 - | betaine aldehyde dehydrogenase betI 1000687 - 1000061 - | transcriptional regulator BetI TERM 1149 1000549 - 1000568 + g 73 -2.8 -5.12707 | gap 1, opp_overlap 1000549 1000550, overlap 1000550 AATAGTGACTCACAA TGCCCA-CT GAG AGCTGGGCC TTTTTTGCAATTTGA TERM 1150 1000805 - 1000747 - H 86 -10.9 -3.32109 | gap 1, opp_overlap 1000737 1000760, overlap 1000737 1000748 1000760 TGACACATGATAACA CTTTTTCATGATACTTTTTATTGATTGA ACGT TCAATCAATAAAAAGTATCATAATGAA- AAATTCCGGGTAAAT TERM 1151 1000805 - 1000748 - H 100 -16.9 -2.58783 | opp_overlap 1000737 1000760, overlap 1000737 1000747 1000760 GACACATGATAACAC TTTTTCATGATACTTTTTATTGATTGA ACGT TCAATCAATAAAAAGTATCATAATGAA AAATTCCGGGTAAAT TERM 1152 1000760 - 1000793 + H 100 -15.7 -2.82516 | opp_overlap 1000760 1000747 1000748 CACTTTTTCATGATA CTTTTTATTGATTGA ACGT TCAATCAATAAAAAG TATCATAATGAAAAA TERM 1153 1000793 - 1000760 - H 100 -15.7 -2.78596 | opp_overlap 1000760, overlap 1000747 1000748 CACTTTTTCATGATA CTTTTTATTGATTGA ACGT TCAATCAATAAAAAG TATCATAATGAAAAA TERM 1154 1001066 - 1001099 + G 71 -6.8 -4.11039 | opp_overlap 1001056 CGAAACCAGCCAGCA CGGATTGACCTG GATTCAGCAA CAGGTCAATCAG TTGTTTGGTTGGTAT TERM 1155 1001235 - 1001256 + G 71 -8.7 -3.38361 | overlap 1001226 1001224 TATCTGGTATGGACC TCCATGCTG TTCT CAGCAGGGA TTGGTATTGCACTTT ACIAD1011 1000935 - 1002515 + | putative choline/carnitine/betaine transporter family protein TERM 1156 1002570 - 1002554 - f 72 -8.1 -3.39923 | opp_overlap 1002549, overlap 1002549 ATGACTAAAATCTAA TTCTGAA TAT TTCAGAA AAAGAATATTGATGT TERM 1157 1002880 - 1002909 + G 77 -3.5 -5.11063 | overlap 1002878 GCTGGTACTACTTGT TGGCAGCCACCTT ATAT ATGGTGTTTGTCA TTTTTATTGCCTGCT TERM 1158 1004298 - 1004288 - g 71 -4.6 -4.66833 | TCTGAACTGGAAAAA GCGC TTA ACGC GTGTGATGCATCATC betT 1002681 - 1004741 + | choline transport protein BetT ACIAD1013 1004754 - 1005377 + | hypothetical protein TERM 1159 1005411 - 1005394 - T 100 -11.3 -4.11216 | opp_overlap 1005394 GGCTGATCCTCAAAA CCGAAGC TTCT GCTTCGG TTTTTTATTCGAGTA TERM 1160 1005394 - 1005411 + T 100 -11.3 -5.46657 | opp_overlap 1005394 GGCTGATCCTCAAAA CCGAAGC TTCT GCTTCGG TTTTTTATTCGAGTA ACIAD1014 1006531 - 1005416 - | putative transcriptional regulator; putative regulator of acetoin metabolisme TERM 1161 1006171 - 1006202 + g 76 -6.6 -4.56775 | overlap 1006172 AATAGACACAACTGG CGCGATTGGTTTTG AGTG CAAGACCAATGGCA TTTTTCCCGACAGCT TERM 1162 1006172 - 1006201 + g 76 -10.1 -3.33744 | overlap 1006171 ATAGACACAACTGGC GCGATTGGTTTTG AGTG CAAGACCAATGGC ATTTTTCCCGACAGC TERM 1163 1006656 - 1006683 + r 71 -7.9 -3.671 | gap 1, opp_overlap 1006656 GTATCTATAGACATA TCTTGG-GATCT GGGCA AGATCACCAAGA TTTAGACATTTATTT lipA 1007777 - 1006746 - | lipoyl synthase TERM 1164 1006843 - 1006875 + g 100 -9.1 -4.58395 | opp_overlap 1006846, overlap 1006846 TGACGATCTGCATGA TAACTGGAGCGAACC AGC GGTGCACTCCAGATA TTTTTAAAACCTAGA TERM 1165 1006846 - 1006872 + g 79 -10.8 -2.93975 | opp_overlap 1006846, overlap 1006843 CGATCTGCATGATAA CTGGAGCGAACC AGC GGTGCACTCCAG ATATTTTTAAAACCT TERM 1166 1006872 - 1006846 - G 100 -13 -3.41051 | opp_overlap 1006846 1006843 CGATCTGCATGATAA CTGGAGCGAACC AGC GGTGCACTCCAG ATATTTTTAAAACCT TERM 1167 1007529 - 1007507 - G 70 -9.2 -2.8294 | overlap 1007512 TATCGCCCATAATCA TAAAAGTGGC TGT GCCACTTCCA AAACATTGTGGCAAG TERM 1168 1007524 - 1007512 - G 100 -9.1 -4.58466 | overlap 1007507 CCCATAATCATAAAA GTGGC TGT GCCAC TTCCAAAACATTGTG acoA 1008126 - 1009088 + | acetoin:2,6-dichlorophenolindophenol oxidoreductase alpha subunit acoB 1009104 - 1010123 + | acetoin:2,6-dichlorophenolindophenol oxidoreductase alpha subunit TERM 1169 1011440 - 1011463 + G 72 -7.6 -3.75024 | gap 1 CCAATTTGGGAATGC TCGGCATCAAA AAC TTTGATGC-GA TTATTAATCCTCCAC acoC 1010125 - 1011666 + | dihydrolipoamide acetyltransferase acoD 1011671 - 1013077 + | dihydrolipoamide dehydrogenase (E3 component of pyruvate and 2-oxoglutarate dehydrogenase complexes) TERM 1170 1013109 - 1013081 - f 79 -5.5 -5.04597 | gap 1 ATTCATATATAAAAA TATGACCTTTAC CACTGT GTAA-GGTCATA CAGTTTAAAGGGTTT TERM 1171 1013802 - 1013788 - g 91 -6.4 -5.49568 | AAGCGAAAAGAAAAA GCCAAA GAA TCTGGC GTTGCGGACTATATT ACIAD1021 1013095 - 1014210 + | putative (R,R)-butanediol dehydrogenase budC 1014220 - 1015035 + | acetoin dehydrogenase (diacetyl reductase) TERM 1172 1015053 - 1015075 + F 79 -5.5 -5.09895 | opp_overlap 1015055, overlap 1015056 GTGATGATGTTGGAA CAGGGCAGC GAATA GCTGCCTTA TTTTTTAAGTGAATG TERM 1173 1015056 - 1015072 + F 93 -9.4 -4.64763 | opp_overlap 1015055, overlap 1015053 ATGATGTTGGAACAG GGCAGC GAATA GCTGCC TTATTTTTTAAGTGA ACIAD1023 1015324 - 1015845 + | putative acyl-CoA thioester hydrolase TERM 1174 1015941 - 1015904 - T 100 -11.5 -4.29656 | opp_overlap 1015903 1015909, overlap 1015909 CATAAAAGCCTAAAA TAAAAGGGCAAAACC GCAGCAAT GGTTTAGCCCTTTTA CTAGATTAAAGTCTA TERM 1175 1015936 - 1015909 - T 88 -7 -5.10163 | opp_overlap 1015909 1015903, overlap 1015904 AAGCCTAAAATAAAA GGGCAAAACC GCAGCAAT GGTTTAGCCC TTTTACTAGATTAAA TERM 1176 1015909 - 1015936 + T 81 -7.7 -4.30978 | opp_overlap 1015904 1015909, overlap 1015903 AAGCCTAAAATAAAA GGGCAAAACCG CAGCAA TGGTTTAGCCC TTTTACTAGATTAAA ACIAD1024 1016251 - 1015985 - | hypothetical protein TERM 1177 1017659 - 1017684 + G 91 -10.5 -4.08064 | opp_overlap 1017663, overlap 1017660 CGAATTGAAATTATT ACAAGCCAGTT AGGC AACTGGCTTGA TTTTGAGAAACAGTT TERM 1178 1017660 - 1017683 + G 100 -14 -3.04517 | opp_overlap 1017663, overlap 1017659 GAATTGAAATTATTA CAAGCCAGTT AGGC AACTGGCTTG ATTTTGAGAAACAGT TERM 1179 1017680 - 1017663 - g 78 -9.9 -3.49924 | opp_overlap 1017660 1017659 TTGAAATTATTACAA GCCAGTT AGGC AACTGGC TTGATTTTGAGAAAC ACIAD1025 1016717 - 1017733 + | putative cobalamin synthesis protein dctA 1018868 - 1017738 - | aerobic C4-dicarboxylate transport protein TERM 1180 1019046 - 1019034 - H 73 -7.7 -3.76815 | overlap 1019032 ATCAAACAAATAAGA CTGGT CAG ACCAG TGCAAAAACCTAGCC ACIAD1027 1019216 - 1019746 + | hypothetical protein fbp 1019796 - 1020131 + | peptidyl-prolyl cis-trans isomerase TERM 1181 1020178 - 1020133 - f 81 -9.3 -3.73968 | gap 1, opp_overlap 1020134 1020136 1020149 1020166 1020176, overlap 1020136 1020149 AAACCCGTGATTAAA CCAG-GATTATAAAAAAGCCCA TTC TGGGCTTTTTTATAGTCACTAT AATTTTTAGATTATA TERM 1182 1020134 - 1020177 + F 91 -12.8 -3.29195 | gap 1, opp_overlap 1020133 1020136 1020149, overlap 1020136 1020149 1020166 1020176 AACCCGTGATTAAAC CAG-GATTATAAAAAAGCCCA TTC TGGGCTTTTTTATAGTCACTA TAATTTTTAGATTAT TERM 1183 1020174 - 1020136 - f 90 -13.4 -2.96695 | opp_overlap 1020134 1020136 1020149 1020166, overlap 1020133 1020149 CCCGTGATTAAACCA GGATTATAAAAAAGCCCA TTC TGGGCTTTTTTATAGTCA CTATAATTTTTAGAT TERM 1184 1020136 - 1020175 + F 100 -15.4 -3.19705 | gap 1, opp_overlap 1020136 1020133 1020149, overlap 1020134 1020149 1020166 CCCGTGATTAAACCA G-GATTATAAAAAAGCCCA TTC TGGGCTTTTTTATAGTCAC TATAATTTTTAGATT TERM 1185 1020149 - 1020161 + F 100 -9.1 -5.31877 | opp_overlap 1020149 1020136 1020133, overlap 1020136 1020134 CAGGATTATAAAAAA GCCCA TTC TGGGC TTTTTTATAGTCACT TERM 1186 1020161 - 1020149 - f 100 -9.1 -5.32882 | opp_overlap 1020136 1020134 1020149, overlap 1020136 1020133 CAGGATTATAAAAAA GCCCA TTC TGGGC TTTTTTATAGTCACT TERM 1187 1020166 - 1020180 + F 77 -5.8 -4.8066 | opp_overlap 1020136 1020133, overlap 1020136 1020134 1020176 CCATTCTGGGCTTTT TTATAG TCA CTATAA TTTTTAGATTATATT TERM 1188 1020482 - 1020470 - f 72 -4.9 -4.81249 | overlap 1020462 GCTTAAACTGAAAAA GTTTT CAG AAAAC AACTTTTTTTTAAAA TERM 1189 1021364 - 1021352 - g 71 -3.4 -5.055 | CGAATTGCCAAAAAA TTGG GTATG CCAA TTACCATTACACTTG TERM 1190 1021850 - 1021829 - g 78 -2.3 -5.42259 | gap 1 CTAGCGTCAAAAAAA TTGG-TGGTG ACT CAACAGCCAA AAGAAAGCGATCATT ACIAD1029 1020509 - 1022584 + | putative lipoprotein (haemin storage system) (HmsF) TERM 1191 1023420 - 1023407 - g 70 -8.1 -3.65827 | CAAGGTTTATGGAAA CAGCG TTTA CGCTG GGCGATGGGTGGGGC ACIAD1030 1022591 - 1023865 + | N-glycosyltransferase PgaC ACIAD1031 1023883 - 1024302 + | hypothetical protein TERM 1192 1024334 - 1024371 + F 95 -13.7 -3.45602 | opp_overlap 1024340, overlap 1024340 ATCAACTCATGATGT TATGAATGCCAGTTTGC TTCT GTAAGCTGGCATTTATA TTATGGCTGTTTCAT TERM 1193 1024340 - 1024365 + F 100 -10.5 -4.28188 | opp_overlap 1024340, overlap 1024334 TCATGATGTTATGAA TGCCAGTTTGC TTCT GTAAGCTGGCA TTTATATTATGGCTG TERM 1194 1024767 - 1024793 + G 74 -9.5 -3.35901 | opp_overlap 1024765 AGATTAAATCAATGC TCGTCAAGCGT TATCC ACGTTTGGCGA TTCCTGCTTTCCTTT ACIAD1032 1024475 - 1025620 + | putative acyltransferase ACIAD1033 1025704 - 1026279 + | nucleoside/purine/pyrimidine transport protein PnuC TERM 1195 1026331 - 1026309 - g 71 -7 -4.23674 | CTGGACCAATATAAA GCAAACTGTT TTG ACCAGCTTGC GCTTAAAATTCAGCA ACIAD1034 1026276 - 1026551 + | hypothetical protein ACIAD1035 1026610 - 1027206 + | putative esterase TERM 1196 1027239 - 1027215 - T 100 -11.5 -5.46706 | opp_overlap 1027204 1027215 ACTTTAAAATAAAAA GCGCGTACTCT TTA AAAATACGCGC TTTTTATTTATGTAT TERM 1197 1027215 - 1027239 + T 93 -7.1 -5.4433 | opp_overlap 1027215, overlap 1027204 ACTTTAAAATAAAAA GCGCGTACTCT TTA AAAATACGCGC TTTTTATTTATGTAT ACIAD1036 1028542 - 1027247 - | major facilitator superfamily permease TERM 1198 1027316 - 1027301 - G 86 -9 -4.32857 | overlap 1027314 TGTTTTAAACACAAA GGCTGT ACAT ACAGCC ATAATAGCCAGCGCA ACIAD1037 1028851 - 1028648 - | hypothetical protein ACIAD1038 1029053 - 1029904 + | putative hydrolase def2 1029904 - 1030386 + | peptide deformylase 2 TERM 1199 1030370 - 1030395 + F 85 -4.1 -5.63103 | gap 1, overlap 1030371 1030372 ATGGCGTACTATTTG TC-GACAGATTG ATT TAATCTGTCTGG TTTTTTTGCTTAGAG TERM 1200 1030372 - 1030392 + F 80 -9.1 -3.55657 | overlap 1030371 1030370 GGCGTACTATTTGTC GACAGATTG ATT TAATCTGTC TGGTTTTTTTGCTTA ACIAD1040 1030547 - 1031812 + | glutaminase ACIAD1041 1032620 - 1031847 - | AraC family transcriptional regulator TERM 1201 1032260 - 1032284 + g 74 -9.3 -3.33815 | overlap 1032254 GTCTCGAACGATCAT CTGGATGGTCT TTA AGCTCATCCAG TTCATTAAAACGAAT TERM 1202 1032868 - 1032892 + G 78 -10.1 -3.55622 | opp_overlap 1032867 1032875, overlap 1032867 1032875 TGCGATTTATCCAAT GCTCAAAGCAA ATT TTGCTTTAAGC TTTGCCCAGGTTGGA TERM 1203 1033408 - 1033418 + G 70 -5.4 -4.49756 | GATCATGGCTATAGG CACA ATA TGTG TTTTGATGTTTGCCA fsr 1032731 - 1033945 + | major facilitator superfamily fosmidomycin/multidrug transport protein TERM 1204 1033999 - 1033962 - f 71 -5.7 -4.46072 | gap 1 TCGAATAAATATAAA TTGATGCCC-ATTTTGAC TAA ATCATATTTGGGCATCAA TGAGACAGGACGTGA ACIAD1044 1034335 - 1034628 + | putative cold shock protein TERM 1205 1034668 - 1034633 - T 85 -10.6 -3.36588 | opp_overlap 1034642, overlap 1034642 TTAAAAAATAAATGA CCTAAAAAATCCCTCT TGAA AGAGGGATTTTTTTGT TTAGCTTATCGAATC TERM 1206 1034642 - 1034659 + T 100 -9.9 -5.96894 | opp_overlap 1034633 1034642 AAATGACCTAAAAAA TCCCTCT TGAA AGAGGGA TTTTTTTGTTTAGCT TERM 1207 1034659 - 1034642 - T 100 -9.9 -5.13521 | opp_overlap 1034642, overlap 1034633 AAATGACCTAAAAAA TCCCTCT TGAA AGAGGGA TTTTTTTGTTTAGCT metH 1038355 - 1034669 - | B12-dependent methionine synthase TERM 1208 1035702 - 1035726 + g 78 -7.1 -4.42062 | GCATATTCAGCACGA TGCTCGGCAAT AAA ATTACCGCGCA TTTCTTTCGACAATA TERM 1209 1036121 - 1036131 + g 71 -2.4 -5.09426 | TACTTTACCTTTAGA CTGG CTT CCTG TTTTTTCAGCTTCGA ACIAD1046 1038485 - 1038676 + | hypothetical protein TERM 1210 1038714 - 1038686 - f 77 -4.7 -5.19879 | TGGTAAATAGAAAAA TGAAGTCAAAT GGATAAA AATTGACTTCA TAAAAGGGCTGTTTG pit 1038795 - 1040423 + | phosphate transporter TERM 1211 1040461 - 1040440 - f 75 -8.7 -3.52113 | opp_overlap 1040442, overlap 1040442 TTTGAAAATGCAGAA GAGGCCACT AAAG AGTGGCCTT TTTTTTATCTCTGGT TERM 1212 1040442 - 1040459 + F 100 -11.3 -6.06529 | opp_overlap 1040440 1040442 TGAAAATGCAGAAGA GGCCACT AAAG AGTGGCC TTTTTTTTATCTCTG TERM 1213 1040459 - 1040442 - f 87 -11.3 -3.32984 | opp_overlap 1040442, overlap 1040440 TGAAAATGCAGAAGA GGCCACT AAAG AGTGGCC TTTTTTTTATCTCTG TERM 1214 1041350 - 1041364 + G 71 -4.2 -4.88895 | overlap 1041351 TCAGAATATTCAAGT TGATGC TGA GCATCC TTTATTTGTTTATTT dsdA 1040556 - 1041881 + | D-serine dehydratase TERM 1215 1041912 - 1041882 - T 86 -10.6 -3.64259 | opp_overlap 1041888, overlap 1041888 AAGCAGTGTGAATAA TAAAAAGCCTGTGT AGC ATACAGGCTTCTTA AAACTTATTTCTTAA TERM 1216 1041888 - 1041906 + T 82 -9.6 -3.66429 | opp_overlap 1041882 1041888 TGTGAATAATAAAAA GCCTGTGT AGC ATACAGGC TTCTTAAAACTTATT TERM 1217 1041906 - 1041888 - T 89 -7.4 -5.29445 | opp_overlap 1041888, overlap 1041882 TGTGAATAATAAAAA GCCTGTGT AGC ATACAGGC TTCTTAAAACTTATT ACIAD1049 1043467 - 1041917 - | hypothetical protein TERM 1218 1043394 - 1043413 + g 73 -2.8 -5.23765 | gap 1, overlap 1043399 GAAATAATCGCTTTA CCCGTGTGC GAT GTAC-TGGG TTTTTGTGTTGTTTC TERM 1219 1043657 - 1043643 - R 100 -10 -4.40003 | opp_overlap 1043643 TTGCACAAACAGAAA GAGCCT TAC AGGCTC TTTAGTTGTCTAGTG TERM 1220 1043643 - 1043657 + r 87 -10 -4.05245 | opp_overlap 1043643 TTGCACAAACAGAAA GAGCCT TAC AGGCTC TTTAGTTGTCTAGTG ACIAD1051 1044298 - 1043675 - | hypothetical protein ACIAD1052 1044449 - 1045087 + | putative membrane-bound protein in GNT I transport system (GntY) TERM 1221 1045126 - 1045109 - f 100 -9.9 -5.42259 | opp_overlap 1045109 TTAGTTTTAAAAAAA GCCTCTT TATT AAGAGGC TTTTTTTATTAGAAG TERM 1222 1045109 - 1045126 + F 100 -9.9 -5.7946 | opp_overlap 1045109 TTAGTTTTAAAAAAA GCCTCTT TATT AAGAGGC TTTTTTTATTAGAAG pfeA 1045245 - 1047422 + | outer membrane receptor FepA TERM 1223 1047858 - 1047845 - g 76 -6.7 -4.4836 | opp_overlap 1047844 GAACAAAATGTAAAA GATGC AGCA GCATC GATTAGTGTGATTAG TERM 1224 1047913 - 1047898 - g 100 -7.6 -5.48213 | opp_overlap 1047897 TATTGAAAAGAAAAA TGCAAC CAAC GTTGCA GATTTACTCACAGAT ACIAD1054 1047677 - 1049914 + | putative ferric siderophore receptor protein TERM 1225 1049941 - 1049966 + T 100 -12 -5.9663 | opp_overlap 1049941 TCTGTTAAAAAAAAA GATCCGCAAT TCAGAT ATTGCGGATC TTTTTTTTAATATTT TERM 1226 1049966 - 1049941 - T 100 -12 -6.06723 | opp_overlap 1049941 TCTGTTAAAAAAAAA GATCCGCAAT TCAGAT ATTGCGGATC TTTTTTTTAATATTT ACIAD1055 1050978 - 1049980 - | hypothetical protein TERM 1227 1051121 - 1051111 - H 72 -2.6 -5.22104 | opp_overlap 1051111 CAAAAAATAATAAAA TTTA AAA TAAA TCATTAAGCTAAACA TERM 1228 1051417 - 1051433 + G 83 -10.9 -3.53224 | GTTCAGACTCGCGTG TACCTGC TGA GCAGGTA TTTGACCAAGGACTG ACIAD1056 1051254 - 1051868 + | putative carbonic anhydrase TERM 1229 1051896 - 1051923 + T 83 -11.4 -2.9356 | opp_overlap 1051901, overlap 1051901 TGTCATGCAATTGGA CTAAAGGCGCTT TATA AAGCGCCTTTAA TATATGGGTATGCGT TERM 1230 1051901 - 1051918 + T 90 -11.3 -3.89212 | opp_overlap 1051901, overlap 1051896 TGCAATTGGACTAAA GGCGCTT TATA AAGCGCC TTTAATATATGGGTA TERM 1231 1051918 - 1051901 - T 90 -11.3 -3.76492 | opp_overlap 1051901 1051896 TGCAATTGGACTAAA GGCGCTT TATA AAGCGCC TTTAATATATGGGTA tesA 1052542 - 1051907 - | multifunctional acyl-CoA thioesterase I/protease I/lysophospholipase ACIAD1058 1052585 - 1053289 + | ABC transporter ATP-binding protein TERM 1232 1054934 - 1054911 - g 81 -7.5 -4.59773 | CCTGATTGCCAAAAA TGATCAGCC TTTTAC AGCTGATCA GATTAAACAGAATAA ACIAD1059 1053286 - 1055757 + | hypothetical protein ACIAD1060 1056609 - 1055779 - | hypothetical protein TERM 1233 1056565 - 1056537 - G 80 -10.4 -3.40907 | gap 1, overlap 1056540 CTACATTAATAGCAA TCA-GCATGGCGG TCAT CCACCATGCGTGA AGATCAAGTTTACGA TERM 1234 1056561 - 1056540 - G 89 -12.3 -2.85437 | overlap 1056537 CATTAATAGCAATCA GCATGGCGG TCAT CCACCATGC GTGAAGATCAAGTTT TERM 1235 1056910 - 1056895 - g 77 -6.1 -4.6902 | TGATAATTTTAAAAA GGCTG TGGTGG CAGCC GAAGATGGCAAATTT mtgA 1056689 - 1057363 + | monofunctional biosynthetic peptidoglycan transglycosylase TERM 1236 1057421 - 1057387 - f 95 -8.9 -5.24531 | opp_overlap 1057387 1057389 ACTTTGGATAAAAAA CATAAAAAAACAC GTTTAAGGG GTGTTTTTTTATG TAATTGAAATAATTT TERM 1237 1059097 - 1059084 - g 70 -8.1 -3.66356 | ATTGCCAATGTCAAA GCAGG AAAG CCTGC GCATATTATTGTAAA ppk 1057485 - 1059560 + | polyphosphate kinase TERM 1238 1059612 - 1059575 - T 76 -10.1 -2.83368 | opp_overlap 1059585, overlap 1059585 ATACCAAAATAATAT GACAAAAAAAGGAGTCT TTAA AGACTCCTTTTTTCATT CTGAACATAAAATTT TERM 1239 1059602 - 1059585 - T 100 -9.9 -5.70829 | opp_overlap 1059585, overlap 1059575 AATATGACAAAAAAA GGAGTCT TTAA AGACTCC TTTTTTCATTCTGAA TERM 1240 1059585 - 1059602 + T 100 -9.9 -5.32944 | opp_overlap 1059585 1059575 AATATGACAAAAAAA GGAGTCT TTAA AGACTCC TTTTTTCATTCTGAA estR 1060546 - 1059641 - | esterase operon transcriptional regulator ACIAD1064 1061498 - 1060560 - | putative hydrolase (EstB) TERM 1241 1061539 - 1061520 - R 89 -8.6 -4.56775 | opp_overlap 1061520 1061514 ATCCGTTCCTAAAAA GGACACTC AGAT GAATGTCC TTGCTATTTAAACCT rubB 1062735 - 1061554 - | rubredoxin-NAD(+) reductase TERM 1242 1062812 - 1062776 - R 87 -9.7 -3.99719 | opp_overlap 1062782 1062783, overlap 1062783 AAAACTAAGATTAAA TTAAAAAGACCATGT TTCATGG ACATGGTCTTTTGAA ATACCGATTAAACTT TERM 1243 1062783 - 1062805 + r 89 -9.2 -4.13945 | opp_overlap 1062776 1062783, overlap 1062782 AGATTAAATTAAAAA GACCATGTTT CAT GGACATGGTC TTTTGAAATACCGAT TERM 1244 1062805 - 1062783 - R 88 -7.8 -5.02715 | opp_overlap 1062782 1062783, overlap 1062776 AGATTAAATTAAAAA GACCATGT TTCATGG ACATGGTC TTTTGAAATACCGAT rubA 1062984 - 1062820 - | rubredoxin ACIAD1068 1063880 - 1063365 - | hypothetical protein lysS 1064137 - 1065666 + | lysyl-tRNA synthetase TERM 1245 1065715 - 1065675 - T 93 -7.7 -5.72622 | opp_overlap 1065685, overlap 1065685 TGTATAAATAAAAAA GATATAAAAAGAGCTTCTA ATT CAGAAGCTCTTTTTTTTGC TGAAAATTATTTTTT TERM 1246 1065705 - 1065685 - T 100 -10.5 -5.20633 | opp_overlap 1065685, overlap 1065675 AAAAAGATATAAAAA GAGCTTCTA ATT CAGAAGCTC TTTTTTTTGCTGAAA TERM 1247 1065685 - 1065705 + T 100 -9.8 -5.86061 | opp_overlap 1065685 1065675 AAAAAGATATAAAAA GAGCTTCT AATTC AGAAGCTC TTTTTTTTGCTGAAA sodM 1066408 - 1065722 - | superoxide dismutase cobQ 1067984 - 1066587 - | cobyric acid synthase TERM 1248 1069102 - 1069126 + G 70 -7.9 -3.62046 | overlap 1069099 1069117 ACAGGTGCTGTGGAA TCTGAGGCAGA TAC TTTGCCTGAGA TTATTCAGGAAATGC cysD 1068319 - 1069233 + | sulfate adenylyltransferase subunit 2 TERM 1249 1069450 - 1069433 - g 73 -7.1 -4.22652 | TTATATGATTCAAAA TTGATCT ATGA AGATCAA TTACAAGCCGTAACG TERM 1250 1069491 - 1069505 + G 72 -10 -2.82749 | opp_overlap 1069493, overlap 1069490 1069493 AAAAAGTTGGGACGA CAGGTG ATG CACCTG ATTTGGCATTGTTGG cysN 1069286 - 1070899 + | ATP-sulfurylase, subunit 1 TERM 1251 1070910 - 1070944 + T 86 -12.5 -2.53911 | gap 1, opp_overlap 1070903 1070919, overlap 1070919 TATAATTATCTTTAT CATAAAAAACCTCCTA AATT TAGGAGGTTTTTT-TG TAGCTTCAAGCTTAG TERM 1252 1070919 - 1070936 + T 100 -9.9 -5.66684 | opp_overlap 1070919, overlap 1070910 CTTTATCATAAAAAA CCTCCTA AATT TAGGAGG TTTTTTTGTAGCTTC TERM 1253 1070936 - 1070919 - T 100 -9.9 -5.31275 | opp_overlap 1070919 1070910 CTTTATCATAAAAAA CCTCCTA AATT TAGGAGG TTTTTTTGTAGCTTC citN 1072301 - 1070961 - | citrate transporter TERM 1254 1072237 - 1072217 - G 73 -9.1 -3.56558 | opp_overlap 1072214, overlap 1072220 GAACAGGAATGAGAA TAAGTGCAA CCA TTGCACTCA GACGTTTAGTCATGA TERM 1255 1072234 - 1072220 - G 75 -8.6 -3.90241 | opp_overlap 1072214, overlap 1072217 CAGGAATGAGAATAA GTGCAA CCA TTGCAC TCAGACGTTTAGTCA TERM 1256 1072461 - 1072477 + H 78 -2.2 -5.69262 | overlap 1072462 TTTAAAAGTTATTTT TGCACT TTTAT GGTGCG TTTTTGTTTTTATAA ACIAD1075 1072870 - 1073373 + | hypothetical protein TERM 1257 1073423 - 1073439 + F 90 -8 -5.31456 | TATGCACCATATTTA TGCCTC TTCAC GAGGCA TTTTTTATGCATTGA ACIAD1076 1073779 - 1074105 + | hypothetical protein ACIAD1077 1074121 - 1074486 + | hypothetical protein ACIAD1078 1074625 - 1076283 + | putative RHS-related protein ACIAD1080 1076289 - 1076612 + | hypothetical protein TERM 1258 1076666 - 1076687 + T 73 -4.3 -4.96848 | CAAAATAATTTCATA GTCCTGTTC ATTA GTTCAGGAC TTTTTATATGCAACA ACIAD1081 1078168 - 1076846 - | putative hemolysin-related protein TERM 1259 1078301 - 1078338 + r 71 -7.4 -3.70109 | gap 1 TTGATTTAGTAGTGA GAAAATTGTGAAT-TAT TGACC ATAAATTCACGATTTTC TTCTTCAATCATCTG ACIAD1082 1079280 - 1078291 - | putative transcriptional regulator TERM 1260 1079160 - 1079144 - G 76 -6.6 -4.51743 | opp_overlap 1079143 GGATCATTAAACAAA TTACGC AAACG GCGTAA GATATTACTCATGGC ACIAD1083 1079342 - 1079494 + | hypothetical protein TERM 1261 1079546 - 1079558 + F 73 -7.7 -3.80535 | opp_overlap 1079544, overlap 1079544 ATTGATGTTTAAATT GGCAA TTT TTGCC TATTTTCTGGAGGTT TERM 1262 1081027 - 1081006 - g 71 -2.3 -5.2422 | overlap 1081025 AATGACATCAAAAAA CAAGTTCCA AATG CAAAACTTG TTTATAACAACTCGC aceA 1079899 - 1081497 + | isocitrate lyase TERM 1263 1081509 - 1081538 + T 100 -16.7 -4.19238 | opp_overlap 1081516, overlap 1081516 CTAAGGCGTATGGTT TAAAAAACCCTGC ATAA GCAGGGTTTTTTA TTTTAGAGTTAAAAA TERM 1264 1081516 - 1081531 + T 100 -10.4 -5.79595 | opp_overlap 1081516, overlap 1081509 GTATGGTTTAAAAAA CCCTGC ATAA GCAGGG TTTTTTATTTTAGAG TERM 1265 1081531 - 1081516 - T 100 -10.4 -5.02074 | opp_overlap 1081516 1081509 GTATGGTTTAAAAAA CCCTGC ATAA GCAGGG TTTTTTATTTTAGAG ACIAD1085 1082037 - 1081561 - | putative lipoprotein ACIAD1087 1082429 - 1082175 - | hypothetical protein ureD 1082910 - 1083785 + | urease accessory protein ureA 1083894 - 1084196 + | urease gamma subunit ureB 1084219 - 1084527 + | urease beta subunit TERM 1266 1085233 - 1085217 - g 93 -12.3 -3.16288 | opp_overlap 1085211, overlap 1085215 CAAATTGCATGAAGA CTGGGGT TCA ACCCCAG CAGCAATTGATAACT ureC 1084558 - 1086258 + | urease subunit alpha TERM 1267 1086398 - 1086411 + G 75 -2.3 -5.29846 | opp_overlap 1086393 1086390, overlap 1086399 TACACAACAGCTACC TCTGG CAGA CCGGG TTTTTATTTCACCTT ACIAD1092 1086273 - 1086851 + | alpha-ribazole-5'-phosphatase TERM 1268 1086993 - 1086974 - g 74 -9.2 -3.35813 | opp_overlap 1086973 1086974 TGCCACTTTAACCAA CGGCACAG ATAT CGGTGCCG ATTTGCCGCGTACAG ureE 1086861 - 1087340 + | urease accessory protein UreE ureF 1087330 - 1087992 + | urease accessory protein ureG 1088056 - 1088670 + | urease accessory protein ureJ 1088680 - 1089252 + | urease accessory protein TERM 1269 1089288 - 1089273 - f 77 -9 -3.64599 | opp_overlap 1089273 TTATTAGATGGGAAA GGTAGC ATAT GCTACC TTTTTTATATTTGAT TERM 1270 1089273 - 1089288 + F 95 -9 -5.5762 | opp_overlap 1089273 TTATTAGATGGGAAA GGTAGC ATAT GCTACC TTTTTTATATTTGAT TERM 1271 1089630 - 1089599 - g 81 -5.2 -5.09895 | gap 1, opp_overlap 1089603 1089623, overlap 1089623 GAGTGATTTAAAAAA CAAAGTGATC-GATG GTT CAACAGATCACTTGG GTGTAAGTGATTTAT ACIAD1097 1089432 - 1089773 + | hypothetical protein ACIAD1099 1089911 - 1090144 + | hypothetical protein ACIAD1100 1090713 - 1090168 - | putative methyltransferase TERM 1272 1090581 - 1090569 - G 72 -6.3 -4.27259 | TACATACATCCAAAA CAGAA GAA TTCTG GATATCCCACATTAA pbpA 1092740 - 1090713 - | penicillin-binding protein 2 ACIAD1102 1092966 - 1093496 + | hypothetical protein TERM 1273 1093578 - 1093592 + G 91 -8.6 -4.65895 | TTAGATTTCATCAGT GGTTTG TGG CAAACC TTTTTAAATCGACCA ACIAD1103 1093560 - 1094876 + | hypothetical protein adk 1094957 - 1095616 + | adenylate kinase TERM 1274 1095609 - 1095625 + F 76 -4.5 -5.20216 | opp_overlap 1095609 CTATTTTAGACGAGA CTAAATA ATT TATTTGG TTTTTTGCTAATATA TERM 1275 1095637 - 1095673 + F 100 -15.5 -4.13282 | opp_overlap 1095639 1095644, overlap 1095644 TTGGTTTTTTGCTAA TATAAAAGAGTCCTG ATTATTG CAGGACTCTTTTATA TTTTGAGGATATCCT TERM 1276 1095671 - 1095639 - f 90 -13.7 -3.01712 | opp_overlap 1095637 1095644, overlap 1095644 GGTTTTTTGCTAATA TAAAAGAGTCCTG ATTATTG CAGGACTCTTTTA TATTTTGAGGATATC TERM 1277 1095666 - 1095644 - f 100 -9.2 -4.66537 | opp_overlap 1095637 1095644, overlap 1095639 TTTGCTAATATAAAA GAGTCCTG ATTATTG CAGGACTC TTTTATATTTTGAGG TERM 1278 1095644 - 1095666 + F 100 -9.2 -4.89567 | opp_overlap 1095644 1095639, overlap 1095637 TTTGCTAATATAAAA GAGTCCTG ATTATTG CAGGACTC TTTTATATTTTGAGG ACIAD1106 1095691 - 1095867 + | hypothetical protein TERM 1279 1095882 - 1095856 - T 80 -6.6 -4.68645 | opp_overlap 1095862, overlap 1095862 CATCCAAAATTAAAA GATAAAGAGTGA TGA TCACTCTTTGAC TGCCATTTTGCGTGT TERM 1280 1095862 - 1095876 + T 77 -8.6 -3.67989 | opp_overlap 1095856 1095862 AAATTAAAAGATAAA GAGTGA TGA TCACTC TTTGACTGCCATTTT TERM 1281 1095876 - 1095862 - T 89 -8.6 -4.52214 | opp_overlap 1095862, overlap 1095856 AAATTAAAAGATAAA GAGTGA TGA TCACTC TTTGACTGCCATTTT nth 1096536 - 1095871 - | endonuclease III DNA glycosylase/apyrimidinic (AP) lyase ACIAD1109 1097304 - 1096552 - | putative iron-sulfur protein TERM 1282 1096617 - 1096635 + g 70 -3.8 -4.77925 | TTTGCTTTTGTTGAT CAGCTCTA ATG TTGAGTTG TTTTTCCAGTTTTTT TERM 1283 1096680 - 1096709 + g 75 -5.8 -4.62872 | overlap 1096681 GTTTGGCAAGCTCAA TCGTTGTTTTTG CGTCGA CAGAAGCAACGG TTTTTACAGCTTGCT TERM 1284 1097457 - 1097441 - H 81 -9.5 -3.76141 | overlap 1097439 AGGATGATCAAAATA GATGCAT AAT ATGCATC ATAATGAGTCAAAAA TERM 1285 1098746 - 1098731 - g 70 -2.6 -4.94902 | GAAGCAGTAGAAAAA TTTCTG CATG CAAAAA TCTTGTATGCACCTG gdhA 1097660 - 1099003 + | glutamate dehydrogenase TERM 1286 1099028 - 1099047 + T 71 -7.8 -3.56092 | opp_overlap 1099028 AATGAAATGAAAAAA TCCGATGC TGTT GCACCGGA TTTAAAAAATAATGC TERM 1287 1099047 - 1099028 - T 100 -10 -5.41359 | opp_overlap 1099028 AATGAAATGAAAAAA TCCGATGC TGTT GCACCGGA TTTAAAAAATAATGC ACIAD1111 1099743 - 1099066 - | putative signal peptide ACIAD1112 1100796 - 1100020 - | hypothetical protein TERM 1288 1100236 - 1100249 + g 82 -4.5 -5.28176 | opp_overlap 1100236 ATTACGAAATACAGA TGCCC ATTC GGGTA TTTTTTGTGCGTCAC ACIAD1113 1101387 - 1100908 - | hypothetical protein TERM 1289 1101544 - 1101518 - R 85 -4.4 -5.74122 | TATCACACAAAAAAA CGCAGCCC AAAAGCGTGAA GGACTGCG GTTAAAAGGGCCACC ACIAD1114 1101616 - 1101500 - | hypothetical protein TERM 1290 1101694 - 1101663 - R 84 -11.8 -2.95192 | opp_overlap 1101664 1101671, overlap 1101671 TTCAACCTTATAAAT GTAAAAAAGAGAGC CGAA GCTCTCTTTTTTAT TGGATTTTTACTACA TERM 1291 1101664 - 1101693 + r 100 -15.3 -3.47218 | opp_overlap 1101663 1101671, overlap 1101671 TCAACCTTATAAATG TAAAAAAGAGAGC CGAA GCTCTCTTTTTTA TTGGATTTTTACTAC TERM 1292 1101671 - 1101686 + r 95 -9 -5.52096 | opp_overlap 1101663 1101671, overlap 1101664 TATAAATGTAAAAAA GAGAGC CGAA GCTCTC TTTTTTATTGGATTT TERM 1293 1101686 - 1101671 - R 95 -9 -5.24449 | opp_overlap 1101671 1101664, overlap 1101663 TATAAATGTAAAAAA GAGAGC CGAA GCTCTC TTTTTTATTGGATTT lon 1104136 - 1101710 - | DNA-binding ATP-dependent protease La TERM 1294 1102062 - 1102072 + g 74 -6.8 -4.34402 | opp_overlap 1102056 AGTGCCAAACCAGCA GACG GAC CGTC TTTTGGTGTAGCGCC TERM 1295 1103809 - 1103839 + g 75 -8.5 -3.79021 | overlap 1103831 CAATAATTTTTGTGA GTTTTGATCGA TATAAGCCT TCGATCAAAAC TTTGATACAGTTTTC ACIAD1116 1104917 - 1104282 - | putative ligase TERM 1296 1104824 - 1104844 + g 93 -2.5 -5.93809 | opp_overlap 1104817 1104828, overlap 1104828 GAAGATAACGATTAA TAAACCGAC GTT GTCTGATTA TTTTTTTTCTGAGCG TERM 1297 1105002 - 1105053 + r 100 -12.1 -4.4195 | gap 2, opp_overlap 1105009 1105014, overlap 1105014 1105052 TGATTTGATATTGTT TACTAAAGATAAGCAGATGATGAAA ATAT TTTCATCATCTGCTTATCT--AGCA TTTTATGAAATGTGT TERM 1298 1105048 - 1105009 - R 100 -22.6 -3.73402 | opp_overlap 1105002 1105014, overlap 1105014 ATATTGTTTACTAAA GATAAGCAGATGATGAAA ATAT TTTCATCATCTGCTTATC TAGCATTTTATGAAA TERM 1299 1105014 - 1105043 + r 100 -16.7 -3.54721 | opp_overlap 1105009 1105014, overlap 1105002 GTTTACTAAAGATAA GCAGATGATGAAA ATAT TTTCATCATCTGC TTATCTAGCATTTTA TERM 1300 1105043 - 1105014 - R 100 -16.7 -3.86252 | opp_overlap 1105014 1105002, overlap 1105009 GTTTACTAAAGATAA GCAGATGATGAAA ATAT TTTCATCATCTGC TTATCTAGCATTTTA ACIAD1117 1106733 - 1105081 - | hypothetical protein TERM 1301 1105689 - 1105723 + g 71 -2.3 -5.1361 | gap 1, opp_overlap 1105683, overlap 1105691 TTAAAAATGTAGCAG GGCCATATTTCTGAAC CCGA GTT-AGAGATATGGTG TTTTTTAGGCTTTGT TERM 1302 1105691 - 1105721 + g 73 -7.1 -4.18259 | gap 1, opp_overlap 1105683, overlap 1105689 AAAAATGTAGCAGGG CCATATTTCTGAAC CCGA GTT-AGAGATATGG TGTTTTTTAGGCTTT TERM 1303 1105775 - 1105800 + g 72 -6.1 -4.30844 | overlap 1105776 ATGGTCAAAGGGGCA ATTGCAGGCAA AATA TAGCCTGCAAG TTTTGATGGTGGAAT TERM 1304 1105776 - 1105799 + g 72 -9.6 -3.18024 | overlap 1105775 TGGTCAAAGGGGCAA TTGCAGGCAA AATA TAGCCTGCAA GTTTTGATGGTGGAA TERM 1305 1105910 - 1105895 - G 91 -7.6 -4.82901 | opp_overlap 1105880, overlap 1105880 TGCTGTTCAGAAAAA GCAGTT TTGT AACTGC GGACACGTAAACCCA TERM 1306 1106719 - 1106707 - G 74 -4.8 -4.79667 | overlap 1106698 AAAAGTCAGTAAAAA CCGT GAAGA ACGG AACCATGCCTGCATA ACIAD1118 1107144 - 1106740 - | hypothetical protein ACIAD1119 1108108 - 1107128 - | putative CPS-53 prophage, bactoprenol glucosyl transferase ACIAD1120 1108944 - 1108099 - | hypothetical protein lip1 1110130 - 1109159 - | lipase TERM 1307 1111207 - 1111219 + G 76 -7.7 -4.08557 | opp_overlap 1111206 ACAAGTAGATATTAT TGCAG GCC CTGCA TTGTTATTTCAACCA ACIAD1122 1110365 - 1111618 + | putative RND type efflux pump involved in aminoglycoside resistance (AdeT) ACIAD1123 1112189 - 1111905 - | hypothetical protein ACIAD1124 1112734 - 1112186 - | hypothetical protein TERM 1308 1112374 - 1112387 + g 71 -3.1 -4.93877 | GATGCGTTTGACGCT GTTGC GCTT GTAAC TTTTCTTTAGTCACA TERM 1309 1112575 - 1112591 + g 80 -2.9 -5.41746 | CAATTTCCTCTTGCT TGGCGGT AAT AATGCCA TTTTTTTGCACAATT ACIAD1125 1112799 - 1113431 + | hypothetical protein TERM 1310 1113417 - 1113443 + F 100 -15.2 -3.85817 | opp_overlap 1113417 1113419 GAAATGTTTACACCA CATCGTCCAAGC TAA GCTTGGGCGGTG TTTATCACACCGAAT TERM 1311 1113443 - 1113417 - f 81 -10.8 -2.64107 | opp_overlap 1113417, overlap 1113419 GAAATGTTTACACCA CATCGTCCAAGC TAA GCTTGGGCGGTG TTTATCACACCGAAT pepP 1113493 - 1114818 + | aminopeptidase P ubiH 1114844 - 1116052 + | ubiH protein, 2-octaprenyl-6-methoxyphynol hydroxylase, FAD/NAD(P)-binding TERM 1312 1116370 - 1116392 + G 74 -7 -4.254 | overlap 1116363 ATGATTGATCAGGCA CTGGGTTCTA TGG TCGAACCTAG TTTATTGAATCTTGC TERM 1313 1116495 - 1116478 - g 80 -9.9 -3.70773 | GTTCAGATTGAACAA CTGCCAA ATCT TTGGCAG ATCCATCTGGCTGAT TERM 1314 1116686 - 1116696 + G 91 -8.2 -4.70659 | opp_overlap 1116685, overlap 1116678 TTTTTCTGCCAACAG GGCC TTT GGCC TTTTTGCCTATGGCA TERM 1315 1117120 - 1117104 - g 79 -10.9 -3.1236 | overlap 1117102 1117101 TAAAGGTCAAAATGA TGCCATG ATG CATGGCA TGTCGATCATTGGCT ACIAD1128 1116049 - 1117281 + | putative FAD-dependent monooxygenase ACIAD1129 1117454 - 1117705 + | hypothetical protein TERM 1316 1117745 - 1117728 - T 100 -9.9 -5.96894 | opp_overlap 1117728 AGTTAAATAAAAAAA GCATCAG ATCT CTGATGC TTTTTTTGCTTTTAG TERM 1317 1117728 - 1117745 + T 100 -9.9 -5.79588 | opp_overlap 1117728 AGTTAAATAAAAAAA GCATCAG ATCT CTGATGC TTTTTTTGCTTTTAG ACIAD1130 1118602 - 1117757 - | putative methyltransferase TERM 1318 1117882 - 1117912 + g 71 -6.9 -4.21631 | opp_overlap 1117882 1117885, overlap 1117885 GTAATAATCTGAGAA GGAGTTGATCAAG TTGAT CTTGATCGACATC TTTATTGACTGGGTT TERM 1319 1117885 - 1117909 + g 70 -9.4 -2.81702 | opp_overlap 1117885 1117882, overlap 1117882 ATAATCTGAGAAGGA GTTGATCAAG TTGAT CTTGATCGAC ATCTTTATTGACTGG ACIAD1131 1118615 - 1119550 + | putative signal peptide ACIAD1132 1119550 - 1119972 + | hypothetical protein ACIAD1133 1120058 - 1120753 + | putative signal peptide TERM 1320 1121484 - 1121452 - g 82 -3 -5.4477 | gap 1, overlap 1121459 AAATCGTGAAAAAAA GTAATA-CTTTTGAT ATGC ACCAAAAACTATTAC AGGCTGGTAACCACA aesT 1120743 - 1121627 + | esterase TERM 1321 1121632 - 1121650 + T 100 -13.2 -4.66609 | opp_overlap 1121632 ACCCAGCGTAAAAAA CAGCCCAT TAA ATGGGCTG TTTTTGAATCACATG TERM 1322 1121650 - 1121632 - T 100 -13.2 -5.05782 | opp_overlap 1121632 ACCCAGCGTAAAAAA CAGCCCAT TAA ATGGGCTG TTTTTGAATCACATG ACIAD1135 1122388 - 1121639 - | NUDIX family NADH pyrophosphatase TERM 1323 1121689 - 1121703 + g 70 -7.2 -3.87075 | TGGCGTGGGCGATAC TTCCTT TAA AAGGAA TTTCTGGCAACTGAT ACIAD1136 1124028 - 1122388 - | hypothetical protein rnhA-dnaQ 1125496 - 1124144 - | bifunctional ribonuclease HI/DNA polymerase III subunit epsilon TERM 1324 1127815 - 1127798 - g 78 -4.1 -5.19879 | overlap 1127812 1127813 GCTCAAAGATAAAAA GACGTCA TCCA CAACGTC TGCTCGTCATACAGC ACIAD1138 1125708 - 1128929 + | soluble lytic murein transglycosylase TERM 1325 1129002 - 1128976 - g 73 -7.3 -4.07885 | gap 1, opp_overlap 1128976 CATTTTTCTTTAAAA CACTTAGCCTCC TTGT GG-GGCTAGGTG TTTTTTCAATGAATG TERM 1326 1128976 - 1129002 + G 100 -10.9 -5.09895 | opp_overlap 1128976 CATTTTTCTTTAAAA CACTTAGCCTC CTTGT GGGGCTAGGTG TTTTTTCAATGAATG ACIAD1139 1128945 - 1130792 + | oligopeptide ABC transporter periplasmic substrate-binding protein ACIAD1140 1130820 - 1131887 + | oligopeptide ABC transporter membrane protein TERM 1327 1132479 - 1132492 + GF 71 -5.3 -4.56187 | overlap 1132474 TCAGTATGTTTACAC CCAAT GTGT ATTGG TTATTTTTAATTATG ACIAD1141 1131887 - 1132897 + | oligopeptide ABC transporter membrane protein ACIAD1142 1132872 - 1134467 + | oligopeptide ABC transporter ATP-binding protein TERM 1328 1134488 - 1134469 - f 74 -5.8 -4.59342 | opp_overlap 1134465 1134469 1134470 GCCAGTATAAATAAA TTGACAAC TTGT ATTGTCAA TTTGTCGGTTTGCGC ACIAD1143 1134569 - 1135813 + | putative FMN oxidoreductase TERM 1329 1135886 - 1135863 - T 100 -14 -4.66388 | opp_overlap 1135866 AAAACTACAAACAAA TAAGCCTCAC AATT GTGAGGCTTA CTGATGATCATAGTG TERM 1330 1135866 - 1135883 + T 87 -11.3 -3.23692 | opp_overlap 1135863 ACTACAAACAAATAA GCCTCAC AATT GTGAGGC TTACTGATGATCATA ACIAD1144 1137109 - 1136210 - | hypothetical protein ACIAD1145 1138131 - 1137223 - | hypothetical protein TERM 1331 1138237 - 1138208 - R 100 -13.8 -3.65351 | opp_overlap 1138213, overlap 1138213 CCAGTGTTATTCAAA GAAAAGTGTAGC GATTTT GCTACACTTTTC CGAGGTTCTTGTGTG TERM 1332 1138232 - 1138213 - R 88 -7.9 -4.90778 | opp_overlap 1138213, overlap 1138208 GTTATTCAAAGAAAA GTGTAGC GATTTT GCTACAC TTTTCCGAGGTTCTT TERM 1333 1138213 - 1138232 + r 85 -8.6 -4.12599 | opp_overlap 1138213 1138208 GTTATTCAAAGAAAA GTGTAGCG ATTT TGCTACAC TTTTCCGAGGTTCTT ACIAD1147 1139650 - 1138259 - | S-methylmethionine APC transporter TERM 1334 1138716 - 1138697 - G 71 -8.6 -3.53733 | overlap 1138695 TTGATTTGATAAAGA CCACATCA TGCG TGATGCGG CATACAAACCAGAGT rnt 1140928 - 1140263 - | ribonuclease T TERM 1335 1140788 - 1140765 - G 71 -4.6 -4.67607 | gap 1 CCTGGAACAAATAAA CCCTGTTCGTT ATA AACGAT-AGGG ATGCATGCAATTTCA TERM 1336 1140859 - 1140831 - G 86 -9 -4.25104 | gap 1 GTCTGGGCATTAAAA CCTGCTGTT-TCG ACAT CGACAACAACAGG TAAAAAGCCACGGAA TERM 1337 1140925 - 1140935 + g 75 -5.4 -4.7497 | GTGTCACACTTTTCT CCAT TGA ATGG TTTTTCCTGCATAAA pyrC 1141947 - 1140913 - | dihydroorotase TERM 1338 1141735 - 1141725 - G 71 -4.6 -4.72007 | GGTCAGTAAAATAAA GCAC CAT GCGC GGATCAAAATGTACA TERM 1339 1142098 - 1142123 + r 81 -9.1 -3.74224 | opp_overlap 1142098 1142103, overlap 1142103 GAGCTCTTTAAAAAA TAAAAGCCATC AATA GACGGCTTTTA TTTGGATCATTTAAA TERM 1340 1142123 - 1142098 - R 100 -11.3 -5.0133 | opp_overlap 1142098 1142103, overlap 1142103 GAGCTCTTTAAAAAA TAAAAGCCATC AATA GACGGCTTTTA TTTGGATCATTTAAA TERM 1341 1142103 - 1142118 + r 73 -4.6 -4.9138 | opp_overlap 1142098 1142103, overlap 1142098 CTTTAAAAAATAAAA GCCATC AATA GACGGC TTTTATTTGGATCAT TERM 1342 1142118 - 1142103 - R 87 -6.8 -5.42198 | opp_overlap 1142103 1142098, overlap 1142098 CTTTAAAAAATAAAA GCCATC AATA GACGGC TTTTATTTGGATCAT argG 1143484 - 1142144 - | argininosuccinate synthase TERM 1343 1143698 - 1143669 - R 72 -5.1 -4.81359 | overlap 1143690 AACCCAAAGATAAAA TAGAGAAAACCGA TGAT TAGACTTTCTCTA AAGCATTATTTAAAT ACIAD1152 1144545 - 1143685 - | putative transcriptional regulator ACIAD1154 1144735 - 1145586 + | putative transport protein TERM 1344 1145657 - 1145686 + F 100 -10.9 -5.09762 | opp_overlap 1145656 TATATACCTACAATT GGTCAGTCATATT GTGA AATATGGCTGATC TTTTTCTATTAAAGT TERM 1345 1146945 - 1146960 + G 71 -9 -3.35597 | opp_overlap 1146933 1146957, overlap 1146942 AATCAATACTTGTAT TGCCTG TAAT CAGGCA TGTTTGGACCATACC TERM 1346 1147272 - 1147253 - g 87 -6.4 -5.22039 | opp_overlap 1147256, overlap 1147256 TCCAAATTGAAAAAA CAGGCGTA GATT TACGCTTG AATACGCGCGTAAAT TERM 1347 1147654 - 1147637 - g 77 -6.3 -4.7173 | gap 1, opp_overlap 1147637 1147636 1147639 1147640, overlap 1147640 TATTACAGCGAAAAA CAA-GCCC ATT GGGCGTTG GTTTAGGGAAAACAT TERM 1348 1147650 - 1147640 - g 87 -8.2 -4.46215 | opp_overlap 1147640 1147639 1147637 1147636, overlap 1147637 TACAGCGAAAAACAA GCCC ATT GGGC GTTGGTTTAGGGAAA fadH 1145935 - 1147965 + | 2,4-dienoyl-CoA reductase [NADPH] (2,4-dienoyl coenzyme A reductase) TERM 1349 1148173 - 1148154 - T 100 -12.2 -5.18561 | opp_overlap 1148154 CAAATATCTAAAAAA GCCCTTGT TTTT ACAAGGGC TTTTTTTTTGTCTGT TERM 1350 1148154 - 1148173 + T 100 -12.2 -6.32216 | opp_overlap 1148154 CAAATATCTAAAAAA GCCCTTGT TTTT ACAAGGGC TTTTTTTTTGTCTGT ACIAD1156 1148636 - 1148460 - | hypothetical protein ACIAD1157 1148683 - 1149891 + | putative RND transporter, membrane fusion protein TERM 1351 1152276 - 1152258 - g 73 -7.4 -4.2131 | ATTGAGCAAAAAAGA GTGGCAAG TGT CTTGCAAC AACAAGCGCAACTTC ACIAD1158 1149897 - 1152992 + | putative RND efflux transporter ACIAD1159 1152989 - 1156096 + | putative multidrug transporter TERM 1352 1156310 - 1156293 - g 70 -7.7 -3.68351 | opp_overlap 1156293, overlap 1156276 GTTTGATCAGTCAAA GCTCCCA GTGG TGGGAAC TTTATCAAGATGACA ACIAD1160 1156109 - 1157578 + | putative membrane channel protein ACIAD1161 1157618 - 1158133 + | putative RNA polymerase sigma factor ACIAD1162 1158159 - 1159133 + | putative transmembrane sensor ACIAD1163 1159217 - 1161643 + | putative ferric siderophore receptor protein TERM 1353 1161803 - 1161814 + F 73 -4.4 -4.88736 | opp_overlap 1161803 TATAAAAATACCAAG CCAT TAAA ATGG TTTTTATAAGTGGTA ACIAD1164 1162236 - 1163105 + | chaperone protein HchA TERM 1354 1163145 - 1163127 - f 70 -3.8 -4.84761 | opp_overlap 1163127 ATATCTTTAGAAAAA TAGTCTCA GAA CGAGGCTA TTTTTTATTAAAAAT TERM 1355 1163127 - 1163145 + F 84 -5.3 -5.45652 | opp_overlap 1163127 ATATCTTTAGAAAAA TAGTCTC AGAAC GAGGCTA TTTTTTATTAAAAAT ACIAD1165 1163381 - 1164121 + | putative transcriptional regulator ACIAD1166 1164416 - 1164700 + | fragment of urocanate hydratase HutU ACIAD1167 1164926 - 1165081 + | fragment of histidine ammonia-lyase HutH TERM 1356 1165369 - 1165359 - g 71 -2.4 -5.10208 | CAACGGCAATAAAAA TGGC GGG GCCT TCGGTATTATTAGCC proY 1165244 - 1166626 + | amino acid APC transporter TERM 1357 1166696 - 1166668 - f 100 -11.8 -4.28774 | opp_overlap 1166686, overlap 1166686 1166687 TTATCCAATTTAAAA CTGCTCAAGCCT AAACA AGCCTTGAGCAG ATCAAGGATATAATA ACIAD1169 1166769 - 1166891 + | fragment of formiminoglutamase HutG TERM 1358 1166958 - 1166944 - f 71 -8.6 -3.13299 | overlap 1166942 TGATTACATTTAATA CGACAT CTT ATGTCG TCAAGTAACCGCTTA TERM 1359 1166978 - 1166993 + F 100 -9 -5.9873 | opp_overlap 1166968 1166978, overlap 1166991 GTAACCGCTTAAAAA CGCAAC TTCG GTTGCG TTTTTTTTATAATGA TERM 1360 1166993 - 1166978 - f 89 -9 -4.59853 | opp_overlap 1166978 1166991, overlap 1166968 GTAACCGCTTAAAAA CGCAAC TTCG GTTGCG TTTTTTTTATAATGA TERM 1361 1167494 - 1167476 - g 76 -11 -2.55361 | opp_overlap 1167475, overlap 1167475 1167473 1167472 TCATTTAAAAACTAT TCCTGGCG CAT CGCCAGAA CTCATTACAGAAGCG ACIAD1170 1167042 - 1168301 + | hypothetical protein TERM 1362 1168735 - 1168749 + G 70 -5.7 -4.39287 | AGGCTTATTTATTAG TCTGG TTCGT CCAGA TTTTAATGTACTTCC ACIAD1171 1168343 - 1169083 + | hypothetical protein ACIAD1172 1169672 - 1169088 - | putative 2-hydroxychromene-2-carboxylate isomerase protein ACIAD1173 1170424 - 1169723 - | putative nodulin 21-related protein TERM 1363 1171292 - 1171309 + G 84 -6.3 -5.03314 | AAATCTGGATCAGGG CCGTACA CAAG TGTATGG TTTTTTAAGCCTAAA ACIAD1174 1170696 - 1171943 + | hypothetical protein wecB 1171946 - 1173079 + | UDP-N-acetyl glucosamine-2-epimerase ACIAD1176 1173962 - 1173084 - | hypothetical protein TERM 1364 1173237 - 1173254 + g 100 -11.3 -4.0162 | AATTTCCCATGGATA GGCGGAT CGAA ATCCGCC TTTGTGATCTGGACG ACIAD1177 1175808 - 1173955 - | hypothetical protein TERM 1365 1174069 - 1174079 + g 75 -3.2 -5.15969 | AAATGATGATTGTTG CACT AAA GGTG TTTTTTGAGTTCCAA ACIAD1178 1177058 - 1175805 - | putative glycosyltransferase TERM 1366 1176996 - 1176982 - G 76 -7.8 -4.09685 | TTCCATGCCTGAAAA CTGAGC CAC GCCCAG AAGGTTTGCGGAATC ACIAD1179 1177950 - 1177045 - | hypothetical protein ACIAD1180 1178696 - 1177950 - | hypothetical protein phrB 1180269 - 1178836 - | deoxyribodipyrimidine photolyase (photoreactivation), FAD-binding TERM 1367 1180501 - 1180468 - R 100 -13.3 -4.67168 | opp_overlap 1180475 1180498 1180499, overlap 1180472 AAAAATCTTCAAAAA CAAGCAAGGCAAAGT AAAA ACTTTGCCTTGACTG GAAAAACCTTCCAGA TERM 1368 1180497 - 1180472 - R 95 -14.9 -3.24256 | opp_overlap 1180475, overlap 1180468 ATCTTCAAAAACAAG CAAGGCAAAGT AAAA ACTTTGCCTTG ACTGGAAAAACCTTC TERM 1369 1180475 - 1180494 + r 83 -10.8 -3.05384 | opp_overlap 1180472 1180468 TTCAAAAACAAGCAA GGCAAAGT AAAA ACTTTGCC TTGACTGGAAAAACC slyD 1180999 - 1180517 - | FKBP-type peptidyl-prolyl cis-trans isomerase TERM 1370 1181233 - 1181216 - R 100 -9.9 -5.31275 | opp_overlap 1181216 TTTGATGATAAAAAA GGTAGCT CATG AGCTACC TTTAAAAGTCTGTTT TERM 1371 1181216 - 1181233 + r 82 -9.9 -3.6135 | opp_overlap 1181216 TTTGATGATAAAAAA GGTAGCT CATG AGCTACC TTTAAAAGTCTGTTT ACIAD1184 1182567 - 1181257 - | putative D-ala-D-ala-carboxypeptidase, penicillin-binding protein TERM 1372 1181622 - 1181610 - G 70 -7.7 -3.59979 | opp_overlap 1181620 GTGGCTGATTGTAAA GTGAC GTG GTCAC AACAGTCGGTTGGTG TERM 1373 1181642 - 1181667 + g 70 -7.7 -3.72576 | GTCGGTTGGTGTGTT TCGACCTTAAA CATT TTTAAAGTCGA TTTAATCACAGGGAG TERM 1374 1181767 - 1181782 + g 75 -5.4 -4.75372 | TTTATTGGCCACTTC TGCACG CTTA TGTGCA TTTTTGGTACCTAAT TERM 1375 1182951 - 1182935 - g 82 -3 -5.42514 | TTAGAAATTAAAAAA CAACAA AAAAA TCGTTG GAGATTATTCAATAC TERM 1376 1183240 - 1183260 + G 84 -6.1 -4.98531 | overlap 1183241 GATTGACAGTCCATT TGAGCTTGC TGA GCAAACTCG TTTTTCATTTGAAGC TERM 1377 1184150 - 1184139 - g 95 -5.8 -5.67967 | AGCATGATAAAAAAA TGCC GTTT GGCA TGAAATTGCAGGATA TERM 1378 1184208 - 1184222 + G 73 -10 -3.01726 | opp_overlap 1184219, overlap 1184207 TGAATCGTTATGGTG CTGCTG CAA CAGCAG GTTTGTCTGCACAAG ACIAD1186 1182737 - 1184440 + | hypothetical protein TERM 1379 1184483 - 1184466 - f 74 -5.5 -4.81359 | opp_overlap 1184467, overlap 1184461 1184467 AACCGAAAGAGAAAA CGACGCT GTAA AGCGTCT TTTTTTTGTGAGGTA TERM 1380 1184467 - 1184482 + F 100 -9 -5.94713 | opp_overlap 1184467 1184466 1184461 ACCGAAAGAGAAAAC GACGCT GTAA AGCGTC TTTTTTTTGTGAGGT TERM 1381 1184482 - 1184467 - f 75 -9 -3.47188 | opp_overlap 1184467, overlap 1184466 1184461 ACCGAAAGAGAAAAC GACGCT GTAA AGCGTC TTTTTTTTGTGAGGT TERM 1382 1185061 - 1185049 - g 79 -3.3 -5.35721 | opp_overlap 1185049 ACAGAAGAAGAAAAA GAGCT GAA AGCAC GTTATGGTAAATGCT TERM 1383 1185182 - 1185160 - g 85 -4.1 -5.49729 | AACTATGCAAAAAAA CACCCGC ATTCAATGA GCGAGTG GAAGCAATGGTCACA TERM 1384 1185389 - 1185379 - g 71 -2.4 -5.1861 | opp_overlap 1185371 1185379 TTTATGAGCAAAAAA GCGC TTT GCGA TTTTTATGAAAAGCA TERM 1385 1185415 - 1185430 + G 78 -4 -5.18643 | gap 1 AAGCAGCTCGATGAT TGCCGTG AAG CA-GGCA TTTTATTTTCGTTGC idh 1184683 - 1186914 + | isocitrate dehydrogenase TERM 1386 1186931 - 1186970 + T 100 -15.4 -4.2231 | opp_overlap 1186943, overlap 1186943 TAAAGCTGATTGATT TTGAATAAAAAACGATGC CTAG GCATCGTTTTTTATTTGA TTTTGCATCGTAATT TERM 1387 1186943 - 1186958 + T 95 -9 -5.74086 | opp_overlap 1186943, overlap 1186931 ATTTTGAATAAAAAA CGATGC CTAG GCATCG TTTTTTATTTGATTT TERM 1388 1186958 - 1186943 - T 95 -9 -5.45652 | opp_overlap 1186931 1186943 ATTTTGAATAAAAAA CGATGC CTAG GCATCG TTTTTTATTTGATTT ACIAD1188 1187407 - 1187009 - | putative transthyretin-like protein ACIAD1189 1188286 - 1187492 - | putative pseudouridine synthase TERM 1389 1187661 - 1187674 + g 84 -3.8 -5.50499 | overlap 1187644 TGGATTGGCTTACCG CCAG TTCCAC CTGG TTTTTTTACATATGA TERM 1390 1188918 - 1188932 + G 77 -6.4 -4.73388 | TACAACACCCTGAAC TCACCG ATA TGGTGA TTTTTCGTGAAAATT icd 1188428 - 1189738 + | isocitrate dehydrogenase TERM 1391 1189758 - 1189774 + F 83 -5.8 -5.14894 | opp_overlap 1189758 CATAATATGATCAAA CCTCTC ATATC GGGAGG TTTTTATCATTTTTT TERM 1392 1189914 - 1189893 - f 70 -2.3 -5.27923 | gap 1, opp_overlap 1189896, overlap 1189894 1189896 CAACTTCATAAAAAA CTAGCTTGAA CTA TTCTAGCT-G TGATCAAATAGTTGA ACIAD1191 1189971 - 1191359 + | putative transport protein TERM 1393 1191393 - 1191374 - f 100 -10.8 -4.75174 | opp_overlap 1191374 GATTTAATTCAAAAA GCTCTAGA TCGT TCTAGAGC TTTTTTCTGTGCTGG TERM 1394 1191374 - 1191393 + F 100 -10.8 -5.39721 | opp_overlap 1191374 GATTTAATTCAAAAA GCTCTAGA TCGT TCTAGAGC TTTTTTCTGTGCTGG TERM 1395 1191679 - 1191658 - g 72 -7.3 -3.93659 | overlap 1191653 1191650 ATGAAAATTATGAAA TCCGCTGGT TTTC ACCAACGAA TGAAGTCGCGTTTTG ACIAD1192 1191486 - 1192316 + | putative epimerase, PhzC/PhzF-like protein ACIAD1193 1192468 - 1193697 + | putative chloride transport protein TERM 1396 1195501 - 1195476 - g 74 -7.7 -4.07568 | gap 1 CTTCGTGGTTCAAAA TCTGCCAGCTTG CAA CAAG-TGACAGA TAAGGCGATTGAAGC ACIAD1194 1193808 - 1196588 + | putative protease TERM 1397 1196640 - 1196590 - T 81 -7.89999 -4.45117 | gap 1, opp_overlap 1196580 1196592 1196594 1196598 1196610, overlap 1196577 1196592 1196593 1196601 1196610 CAGATTTCAAATAAA TATTTGAATCATTAAAAAAAGCCC TGTA GGGCTTTTTTTAATGAT-CATGTT TATGTGTATGAAAAT TERM 1398 1196592 - 1196638 + T 100 -12.7 -4.17296 | gap 1, opp_overlap 1196577 1196590 1196592 1196593 1196601 1196610, overlap 1196580 1196594 1196598 1196610 GATTTCAAATAAATA TTTGAATCATTAAAAAAAGCCC TGTA GGGCTTTTTTTAATGAT-CATG TTTATGTGTATGAAA TERM 1399 1196638 - 1196592 - T 87 -10.5 -3.82628 | gap 1, opp_overlap 1196580 1196592 1196594 1196598 1196610, overlap 1196577 1196590 1196593 1196601 1196610 GATTTCAAATAAATA TTTGAATCATTAAAAAAAGCCC TGTA GGGCTTTTTTTAATGAT-CATG TTTATGTGTATGAAA TERM 1400 1196637 - 1196593 - T 93 -14 -2.88854 | gap 1, opp_overlap 1196580 1196592 1196594 1196598 1196610, overlap 1196577 1196592 1196590 1196601 1196610 ATTTCAAATAAATAT TTGAATCATTAAAAAAAGCCC TGTA GGGCTTTTTTTAATGAT-CAT GTTTATGTGTATGAA TERM 1401 1196594 - 1196636 + T 100 -17.5 -3.68183 | gap 1, opp_overlap 1196577 1196593 1196592 1196590 1196601 1196610, overlap 1196580 1196592 1196598 1196610 TTTCAAATAAATATT TGAATCATTAAAAAAAGCCC TGTA GGGCTTTTTTTAATGAT-CA TGTTTATGTGTATGA TERM 1402 1196598 - 1196633 + T 100 -19.4 -2.93566 | opp_overlap 1196577 1196593 1196592 1196590 1196601 1196610, overlap 1196594 1196592 1196610 AAATAAATATTTGAA TCATTAAAAAAAGCCC TGTA GGGCTTTTTTTAATGA TCATGTTTATGTGTA TERM 1403 1196630 - 1196601 - T 100 -15.3 -2.76249 | opp_overlap 1196598 1196594 1196592 1196610, overlap 1196593 1196592 1196590 1196610 TAAATATTTGAATCA TTAAAAAAAGCCC TGTA GGGCTTTTTTTAA TGATCATGTTTATGT TERM 1404 1196610 - 1196621 + T 93 -7.2 -5.55664 | opp_overlap 1196610 1196601 1196593 1196592 1196590, overlap 1196598 1196594 1196592 GAATCATTAAAAAAA GCCC TGTA GGGC TTTTTTTAATGATCA TERM 1405 1196621 - 1196610 - T 93 -7.2 -5.58074 | opp_overlap 1196598 1196594 1196592 1196610, overlap 1196601 1196593 1196592 1196590 GAATCATTAAAAAAA GCCC TGTA GGGC TTTTTTTAATGATCA ACIAD1195 1197010 - 1196627 - | hypothetical protein ACIAD1196 1197101 - 1197748 + | hypothetical protein ACIAD1197 1199263 - 1197797 - | hypothetical protein TERM 1406 1197942 - 1197932 - G 78 -5.4 -5.00884 | opp_overlap 1197936, overlap 1197933 1197934 ATTTTTTTCAAAAAA TTGC TCG GCAA TATGCAGATCGTTAT TERM 1407 1198046 - 1198066 + g 77 -4.8 -5.03314 | gap 1, opp_overlap 1198028 CGAAATAAATTCGAC GCTATAACG CAGA CGTT-TAGC TTTTTTCCGCGTACG ACIAD1198 1199488 - 1199868 + | hypothetical protein ACIAD1199 1200012 - 1200776 + | putative outer membrane W signal peptide protein TERM 1408 1200815 - 1200799 - f 79 -3.6 -5.50499 | opp_overlap 1200800, overlap 1200800 TCAGATTCAAAAAAA CCCCGA TTTAT TCGGGT TTTTTTTATGATTAA TERM 1409 1200814 - 1200800 - f 70 -7.1 -3.89215 | opp_overlap 1200800, overlap 1200799 CAGATTCAAAAAAAC CCCGA TTTAT TCGGG TTTTTTTTATGATTA TERM 1410 1200800 - 1200814 + F 100 -7.1 -6.02345 | opp_overlap 1200800 1200799 CAGATTCAAAAAAAC CCCGA TTTAT TCGGG TTTTTTTTATGATTA ACIAD1200 1200906 - 1201541 + | putative thiamin-phosphate pyrophosphorylase (ThiE) TERM 1411 1201705 - 1201693 - g 74 -4.7 -4.7497 | opp_overlap 1201694, overlap 1201694 GGTATTTATCAAAAA GGCGC AAG GCGCT TATCTTTGGGACGAA TERM 1412 1201694 - 1201704 + G 75 -8.2 -3.81488 | opp_overlap 1201693 1201694 GTATTTATCAAAAAG GCGC AAG GCGC TTATCTTTGGGACGA TERM 1413 1201704 - 1201694 - g 71 -8.2 -3.445 | opp_overlap 1201694, overlap 1201693 GTATTTATCAAAAAG GCGC AAG GCGC TTATCTTTGGGACGA hemL 1201571 - 1202869 + | glutamate-1-semialdehyde aminotransferase TERM 1414 1202886 - 1202899 + F 100 -9.5 -5.80364 | opp_overlap 1202886 AGATCATCTGAAGAA GCCCG ATTT CGGGC TTTTTTTATTGGAGT TERM 1415 1202899 - 1202886 - f 80 -9.5 -3.66286 | opp_overlap 1202886 AGATCATCTGAAGAA GCCCG ATTT CGGGC TTTTTTTATTGGAGT ACIAD1202 1202922 - 1203338 + | hypothetical protein TERM 1416 1203669 - 1203679 + G 70 -5.4 -4.51363 | overlap 1203664 TCGTCTAGATCGCGA TACC TCG GGTA TTTTGGTATTTGGTC ACIAD1203 1203493 - 1204137 + | putative ribosomal large subunit pseudouridine synthase A(RluA-like) TERM 1417 1204185 - 1204166 - f 71 -6.5 -4.16921 | opp_overlap 1204166 TAACAATTTTTAAAA GCTCATT TTTTTT AATGAGC TTTATGTCAAAATAT TERM 1418 1205307 - 1205328 + G 78 -9.5 -3.67597 | TTTGCTCGATCCACA GCGTTTTAG CAGT CTAGAACGC TTCTTGGATGAAGAA hepA 1204255 - 1207116 + | ATP-dependent helicase HepA TERM 1419 1207168 - 1207144 - T 100 -15.8 -5.23765 | opp_overlap 1207144 GAAATAATATAAAAA CAAGGGAGGC TAAAT GCCTCCCTTG TTTCTTATGTATGAA TERM 1420 1207144 - 1207168 + T 100 -15.8 -4.42974 | opp_overlap 1207144 GAAATAATATAAAAA CAAGGGAGGC TAAAT GCCTCCCTTG TTTCTTATGTATGAA dps 1207706 - 1207197 - | DNA starvation/stationary phase protection protein Dps ACIAD1206 1208546 - 1207854 - | TetR family transcriptional regulator ACIAD1207 1208687 - 1209748 + | putative oxidoreductase TERM 1421 1209978 - 1209991 + G 71 -6.7 -4.09864 | overlap 1209966 GTTTGCTGGCTGGTT TCCAC CAGC GTGGA TTTTAGGCACTGGAT ACIAD1208 1209763 - 1210857 + | putative fatty acid desaturase TERM 1422 1210869 - 1210913 + T 100 -17.6 -3.36983 | gap 1, opp_overlap 1210858 1210878, overlap 1210878 GTAAGTACTTGATCG TACA-AAAAACACATGCCAGA TTTA TCTGGCATGTGTTTTTATGTG TTGATTCAGGGTTTT TERM 1423 1210878 - 1210903 + T 100 -16.3 -5.10968 | opp_overlap 1210878, overlap 1210869 TGATCGTACAAAAAA CACATGCCAGA TTTA TCTGGCATGTG TTTTTATGTGTTGAT TERM 1424 1210903 - 1210878 - T 100 -16.3 -5.26316 | opp_overlap 1210878 1210869 TGATCGTACAAAAAA CACATGCCAGA TTTA TCTGGCATGTG TTTTTATGTGTTGAT ACIAD1209 1211641 - 1210937 - | putative signal peptide TERM 1425 1211952 - 1211971 + H 88 -7.2 -4.96848 | opp_overlap 1211952, overlap 1211956 GTAGTTAGATGAAAT TAAAGGCC AAAA GGTCTTTA TTTTTATATAAAAAA TERM 1426 1211956 - 1211967 + H 70 -3.6 -5.01422 | opp_overlap 1211952, overlap 1211952 TTAGATGAAATTAAA GGCC AAAA GGTC TTTATTTTTATATAA dat 1212116 - 1213486 + | diaminobutyrate--2-oxoglutarate aminotransferase TERM 1427 1213579 - 1213537 - g 100 -15 -2.70932 | TTTGCTCTGTAATGA TGCTGCATCCATTGCTGAAT ATC AGTCAGCAATGGATGAGGCA GTGAAAGCTGTCGCA ddc 1213493 - 1215025 + | L-2,4-diaminobutyrate decarboxylase TERM 1428 1215060 - 1215045 - f 88 -7.6 -5.0133 | opp_overlap 1215045 CATGTTTTGAAAAAA GATCAC TTCG GTGATC TTTTTTTTATGACAA TERM 1429 1215045 - 1215060 + F 100 -7.6 -5.93809 | opp_overlap 1215045 CATGTTTTGAAAAAA GATCAC TTCG GTGATC TTTTTTTTATGACAA TERM 1430 1215294 - 1215276 - f 74 -5.2 -4.81163 | overlap 1215265 1215277 CAAACACGAATAAAA CGTGGTGT ACA ACACCGCA CCTAATTGAGAGAAA ACIAD1212 1215315 - 1216346 + | phosphate ABC transporter periplasmic substrate-binding protein TERM 1431 1216364 - 1216392 + F 88 -7.5 -4.96848 | gap 1, opp_overlap 1216364 AGTTTTTAAATGAGA GCTGATGGTGGT TTAAGT GCC-CCATCAGC TTTTTGTCTAACAAA TERM 1432 1216394 - 1216408 + F 70 -3.6 -5.0133 | overlap 1216395 AGTGCCCCATCAGCT TTTTGT CTA ACAAAG TTTTTTCAAAGAATG TERM 1433 1216604 - 1216616 + G 80 -2.6 -5.48054 | TGGTTGCACTTTGGT GCGG TATCC CTGC TTTTTTAATTTTGAT pstC 1216450 - 1217829 + | high-affinity phosphate ABC transporter membrane protein pstA 1217826 - 1219223 + | high-affinity phosphate ABC transporter membrane protein pstB 1219235 - 1220146 + | high-affinity phosphate ABC transporter ATP-binding protein TERM 1434 1220181 - 1220166 - f 87 -10.4 -3.85698 | opp_overlap 1220166 TCGGTTTTTTAGAAA GAGCCC ATTT GGGCTC TTTTTTATGATTAAA TERM 1435 1220166 - 1220181 + F 100 -10.4 -5.37345 | opp_overlap 1220166 TCGGTTTTTTAGAAA GAGCCC ATTT GGGCTC TTTTTTATGATTAAA TERM 1436 1221133 - 1221121 - g 86 -7.7 -4.63542 | TACAACGCGTAAAAA GCCAA CGC TTGGC GAAAGATTAGGGCTT ACIAD1216 1220297 - 1221259 + | putative periplasmic protease TERM 1437 1221282 - 1221299 + T 88 -7 -5.11063 | opp_overlap 1221282 CATCTAAATACTAAA GCACTC GATTAA GAGTGC TTTTTATTGCCTAGT TERM 1438 1221299 - 1221282 - T 73 -7 -4.01603 | opp_overlap 1221282 CATCTAAATACTAAA GCACTC GATTAA GAGTGC TTTTTATTGCCTAGT ACIAD1217 1221922 - 1221290 - | hypothetical protein TERM 1439 1221913 - 1221927 + g 70 -7.2 -3.887 | TAAGTGTAAATTTTT TCTCAA TCA TTGAGA TTCTTCGTTATGTAT TERM 1440 1221960 - 1221984 + r 84 -11.5 -3.02591 | opp_overlap 1221960, overlap 1221955 AATGAGTATAAAAAA GCGGAACCATT TAA AATGATTCCGC TCTAGTTTAACTGAT TERM 1441 1221984 - 1221960 - R 100 -13.7 -5.33785 | opp_overlap 1221960 1221955 AATGAGTATAAAAAA GCGGAACCATT TAA AATGATTCCGC TCTAGTTTAACTGAT purB 1223393 - 1222005 - | adenylosuccinate lyase TERM 1442 1223040 - 1223064 + g 75 -2.2 -5.30155 | gap 1, opp_overlap 1223046 GTCTTCAGAGGTACA TGCAAAGTGAA TGAA TTCACCT-GCA TTTTTTAATTCATCC ACIAD1220 1224180 - 1223449 - | hypothetical protein trmU 1225327 - 1224194 - | tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase TERM 1443 1224505 - 1224518 + g 70 -5.3 -4.48877 | CATGACCTTGGCCAA TAACC AGAC GGTTA TTTTCTAGATCTTTG ACIAD1222 1225832 - 1225332 - | putative Nudix hydrolase ACIAD1223 1226244 - 1225894 - | hypothetical protein ACIAD1224 1226903 - 1226364 - | putative transferase TERM 1444 1226944 - 1226978 + r 88 -7.2 -4.84359 | opp_overlap 1226948, overlap 1226948 TGCAGTATAAAAGAA AAAAGGCATTCATGTT TGA AACAGGAATGCCTTCA TTTTTATAGCGATCA TERM 1445 1226948 - 1226974 + r 95 -12.4 -3.88001 | opp_overlap 1226948, overlap 1226944 GTATAAAAGAAAAAA GGCATTCATGTT TGA AACAGGAATGCC TTCATTTTTATAGCG TERM 1446 1226974 - 1226948 - R 100 -12.4 -5.86976 | opp_overlap 1226944 1226948 GTATAAAAGAAAAAA GGCATTCATGTT TGA AACAGGAATGCC TTCATTTTTATAGCG dacC 1228143 - 1226995 - | D-ala-D-ala-carboxypeptidase; penicillin-binding protein 5 (precursor) TERM 1447 1228205 - 1228228 + r 79 -8.2 -4.00756 | gap 1, opp_overlap 1228205 TTAGGATAAAGCAAA GCCGAC-TTCT ACG GGAAAGTCGGC TTATTTCATACAGTA TERM 1448 1228228 - 1228205 - R 85 -8.9 -4.16182 | opp_overlap 1228205 TTAGGATAAAGCAAA GCCGACTTC TACGGG AAAGTCGGC TTATTTCATACAGTA ACIAD1226 1228659 - 1228261 - | hypothetical protein surE 1228919 - 1229686 + | survival protein (acid phosphatase) TERM 1449 1229733 - 1229757 + F 70 -2.2 -5.2112 | overlap 1229736 ACTTTGTGAAAAAAA GAATGAGAAA CTCGT TTATTCATTC TTTTTTGGTAATCTT nlpD 1229817 - 1230650 + | lipoprotein precursor ACIAD1230 1230760 - 1231689 + | putative transcriptional regulator TERM 1450 1231737 - 1231681 - T 100 -17.8 -3.29739 | gap 1, opp_overlap 1231684 1231695 1231702, overlap 1231682 1231702 CGTAATTTACAGGAA GTTTC-TTAATGCAATAAAAAAGCCGC TTAA GCGGCTTTTTTATTGCATTAAAGATAT TCAGATTAAGCAGCA TERM 1451 1231736 - 1231682 - T 100 -21.3 -2.57522 | gap 1, opp_overlap 1231684 1231695 1231702, overlap 1231681 1231702 GTAATTTACAGGAAG TTTC-TTAATGCAATAAAAAAGCCGC TTAA GCGGCTTTTTTATTGCATTAAAGATA TTCAGATTAAGCAGC TERM 1452 1231684 - 1231734 + T 100 -23.9 -3.09492 | gap 1, opp_overlap 1231682 1231681 1231702, overlap 1231695 1231702 AATTTACAGGAAGTT TC-TTAATGCAATAAAAAAGCCGC TTAA GCGGCTTTTTTATTGCATTAAAGA TATTCAGATTAAGCA TERM 1453 1231695 - 1231722 + T 100 -15.8 -3.17901 | opp_overlap 1231682 1231681 1231702, overlap 1231684 1231702 AGTTTCTTAATGCAA TAAAAAAGCCGC TTAA GCGGCTTTTTTA TTGCATTAAAGATAT TERM 1454 1231715 - 1231702 - T 100 -9.5 -5.5074 | opp_overlap 1231695 1231684 1231702, overlap 1231682 1231681 TAATGCAATAAAAAA GCCGC TTAA GCGGC TTTTTTATTGCATTA TERM 1455 1231702 - 1231715 + T 100 -9.5 -5.5074 | opp_overlap 1231702 1231682 1231681, overlap 1231695 1231684 TAATGCAATAAAAAA GCCGC TTAA GCGGC TTTTTTATTGCATTA argD 1232957 - 1231743 - | acetylornithine aminotransferase TERM 1456 1231785 - 1231805 + g 82 -10.5 -3.6106 | TGGAACCAAACGATT GATCAAGTC ATC GGCTTGATC TTTGGACATGTTAAG ACIAD1232 1233098 - 1233463 + | putative glutaredoxin-like protein TERM 1457 1233476 - 1233521 + T 89 -13.7 -2.89971 | gap 1, opp_overlap 1233490, overlap 1233490 TAATTTTCTAATCCG TC-TGACATAAAAAATCCCACA TTA TGTGGGATTTTTTATGTGGTGA TACTTAGTTCTTAGC TERM 1458 1233490 - 1233506 + T 100 -10.9 -5.39721 | opp_overlap 1233490, overlap 1233476 GTCTGACATAAAAAA TCCCACA TTA TGTGGGA TTTTTTATGTGGTGA TERM 1459 1233506 - 1233490 - T 100 -10.9 -5.36441 | opp_overlap 1233490 1233476 GTCTGACATAAAAAA TCCCACA TTA TGTGGGA TTTTTTATGTGGTGA ACIAD1233 1233869 - 1233525 - | putative signal peptide TERM 1460 1233784 - 1233800 + g 100 -12.3 -5.33405 | TGCTGGCCAGTCGTT GCACCAG TTT CTGGTGC TTTTTCTTTACTACA TERM 1461 1234014 - 1233989 - R 100 -7.7 -6.36459 | opp_overlap 1233989 TGCAATAAAAAAAAA GGCTTATCT ATCGAGGG AGATAAGCC TTATAAAAAGTGAGC ahpF 1235606 - 1234047 - | alkyl hydroperoxide reductase subunit F TERM 1462 1235930 - 1235962 + G 74 -4.2 -5.03994 | gap 1, opp_overlap 1235931, overlap 1235931 AGATTTTTTATGAAA ATGGCACAGGA-GAT TTAT ATCATCCTGTACCAC TTTTTATATATGACA TERM 1463 1235961 - 1235931 - g 93 -9.9 -4.2558 | gap 1, opp_overlap 1235930 1235931 GATTTTTTATGAAAA TGGCACAGGA-GAT TTAT ATCATCCTGTACCA CTTTTTATATATGAC TERM 1464 1235931 - 1235961 + G 70 -7.7 -3.61674 | gap 1, opp_overlap 1235931, overlap 1235930 GATTTTTTATGAAAA TGGCACAGGA-GAT TTAT ATCATCCTGTACCA CTTTTTATATATGAC ACIAD1235 1235794 - 1236063 + | hypothetical protein mdmC 1236660 - 1236073 - | O-methyl transferase TERM 1465 1236209 - 1236219 + g 74 -6.8 -4.37658 | opp_overlap 1236207 1236209 TCAACAATTAATATA CCAC CAT GTGG TTTTATCAAACGCTT TERM 1466 1236560 - 1236541 - G 71 -2.1 -5.09685 | opp_overlap 1236541 1236545, overlap 1236545 CAACATAGATAAAAA TTGAGCC GAATCG GGTTCAA TATTGCGATAACGCA ACIAD1237 1236921 - 1236703 - | hypothetical protein TERM 1467 1237090 - 1237118 + r 84 -11.9 -2.71483 | opp_overlap 1237090 ACATATAGATCAAAA TGTCTGATAGAAA ATA TTTCTACCAGACA TGCTTAAAAGACTAT TERM 1468 1237118 - 1237090 - R 100 -14.1 -4.41956 | opp_overlap 1237090 ACATATAGATCAAAA TGTCTGATAGAAA ATA TTTCTACCAGACA TGCTTAAAAGACTAT ACIAD1238 1237573 - 1237130 - | hypothetical protein TERM 1469 1238077 - 1238065 - R 83 -4.9 -5.47159 | opp_overlap 1238051 GGTTAATATAAAAAA TTAAC TTT GTTAA ATACCATTTTGATTA ACIAD1239 1238417 - 1238148 - | hypothetical protein TERM 1470 1240197 - 1240217 + G 76 -7.6 -4.07675 | GAGTGAAGGTCTGAA TCTTGGGT TCTTT GCCCAAGA TTTGATTAGTTTTAA TERM 1471 1240793 - 1240803 + G 76 -6.8 -4.42287 | opp_overlap 1240793 1240791 AGGTATCGAAAAATA CAGG AAA CCTG TTTATTCGTTATTTA ACIAD1240 1238875 - 1241073 + | putative ferric siderophore receptor protein TERM 1472 1241121 - 1241096 - T 82 -9.9 -3.61715 | gap 1, opp_overlap 1241096 CAGCCTGGTTAATAA GCCTCCTAGTAT CTT ATA-TAGGAGGC TTTTCAAAATTAAAA TERM 1473 1241096 - 1241121 + T 93 -9.9 -4.14392 | gap 1, opp_overlap 1241096 CAGCCTGGTTAATAA GCCTCCTAGTAT CTT ATA-TAGGAGGC TTTTCAAAATTAAAA ACIAD1241 1242592 - 1241138 - | putative sulfate transporter TERM 1474 1241549 - 1241567 + g 74 -4.6 -4.8622 | CACGATATTACTGCT CTTTGGAT TAC GTCTAAAG TTTTTGATTGAGCCC ACIAD1242 1243238 - 1243441 + | hypothetical protein TERM 1475 1243613 - 1243636 + F 100 -15.4 -4.41609 | opp_overlap 1243616 AATCGTTGGGTTGGA GAAGCCGCAT ATTT ATGCGGCTTC TTTCTGTTTATGATG TERM 1476 1243633 - 1243616 - f 87 -11.3 -3.28712 | opp_overlap 1243613 CGTTGGGTTGGAGAA GCCGCAT ATTT ATGCGGC TTCTTTCTGTTTATG TERM 1477 1243773 - 1243759 - f 75 -7.2 -4.13014 | TTCATATGTTTAAAA TTTAGG ATG CCTAAA AAAAATTTCATCCTG ACIAD1243 1243842 - 1245161 + | putative transporter TERM 1478 1245200 - 1245181 - f 76 -7.9 -3.93288 | opp_overlap 1245181 TCTTATTCAACTAAA GGGTGTA GAGTAA TACACCC TTTTTCTTTTTTCTG TERM 1479 1245181 - 1245200 + F 100 -7.9 -5.8096 | opp_overlap 1245181 TCTTATTCAACTAAA GGGTGTA GAGTAA TACACCC TTTTTCTTTTTTCTG TERM 1480 1245429 - 1245447 + G 73 -3.8 -4.98436 | overlap 1245431 ATGCAGGGGCTAATG TTCTGATC AAT GAGCAGGA TTTTTATGATCTTGC TERM 1481 1246216 - 1246195 - g 77 -3.8 -5.11389 | gap 1, opp_overlap 1246195 AGAAGAGAAACAAAA CTGGATTGA AGAAA TCAA-CCAG ATTTAAATAAAAAAA add 1245224 - 1246222 + | adenosine deaminase TERM 1482 1246232 - 1246249 + T 95 -8.5 -5.4492 | opp_overlap 1246232 ATTTAAATAAAAAAA TGCATCT TAAA AGATGCA TTTTTTATGTCTATA TERM 1483 1246249 - 1246232 - T 100 -8.5 -5.96894 | opp_overlap 1246232 ATTTAAATAAAAAAA TGCATCT TAAA AGATGCA TTTTTTATGTCTATA ACIAD1246 1246831 - 1246277 - | putative cytochrome ACIAD1247 1247056 - 1247442 + | putative signal peptide rnhB 1247459 - 1248028 + | RNAse HII TERM 1484 1248057 - 1248083 + T 100 -16.8 -3.53343 | opp_overlap 1248054 1248062, overlap 1248062 GCAATTCAGAAATGT TTAAAGCGGCTA GAT TAGCCGCTTTAA TTTGGGAGAAAAATT TERM 1485 1248078 - 1248062 - T 95 -12.3 -3.65426 | opp_overlap 1248062 1248057, overlap 1248054 TCAGAAATGTTTAAA GCGGCTA GAT TAGCCGC TTTAATTTGGGAGAA TERM 1486 1248062 - 1248078 + T 100 -12.3 -4.05788 | opp_overlap 1248054 1248062, overlap 1248057 TCAGAAATGTTTAAA GCGGCTA GAT TAGCCGC TTTAATTTGGGAGAA TERM 1487 1248125 - 1248105 - T 83 -4.9 -5.56112 | opp_overlap 1248105 1248109 AGAAAAATTAAAAAA TAACTTTAA CGG TTAAAATTA TTTTGTGAGTAGTTA ACIAD1249 1249049 - 1248198 - | IS1236 transposase protein 2 TERM 1488 1248957 - 1248974 + g 76 -7.7 -4.07885 | ATCATTATATTTCTG CGCTAGA TTGG TCTGGCG TTTTCGCCAGGCATA ACIAD1250 1249357 - 1249064 - | IS1236 transposase protein 1 csrA 1249604 - 1249392 - | carbon storage regulator TERM 1489 1249679 - 1249728 + r 78 -6.9 -4.37092 | gap 1, opp_overlap 1249679 1249690 TCGGAATTGAGAGAA TTTTAACAGAATT-ATTAGAAAAT GAG AATTTCTTATAAATTCTGTTGAAA TTTTCTAAAAAAGCT TERM 1490 1249804 - 1249749 - R 71 -6.3 -4.11869 | opp_overlap 1249760, overlap 1249760 TAAAAAAGCTACAAA CGCTAATATAACAGAGCCACTATAA AAAACA CTATAGTGGCTCTGTTTTTTTGTCA CGATTCTTTGAAAAG TERM 1491 1249793 - 1249760 - R 100 -14.8 -3.7014 | opp_overlap 1249760, overlap 1249749 CAAACGCTAATATAA CAGAGCCACTATAA AAAACA CTATAGTGGCTCTG TTTTTTTGTCACGAT TERM 1492 1249760 - 1249793 + r 100 -14.1 -5.61596 | opp_overlap 1249760 1249749 CAAACGCTAATATAA CAGAGCCACTATA AAAAACAC TATAGTGGCTCTG TTTTTTTGTCACGAT lysC 1251130 - 1249850 - | aspartate kinase TERM 1493 1251038 - 1251016 - G 71 -8.4 -3.48924 | overlap 1251017 1251022 TCATCGCTGATACAA CCACAACCAC TTT GTGGCCGTGA TCATGCCAGCGCTTC TERM 1494 1251037 - 1251017 - G 71 -9.7 -2.6914 | overlap 1251016 1251022 CATCGCTGATACAAC CACAACCAC TTT GTGGCCGTG ATCATGCCAGCGCTT alaS 1253832 - 1251196 - | alanyl-tRNA synthetase TERM 1495 1253703 - 1253690 - G 75 -3.1 -5.09426 | opp_overlap 1253690 TCTAAGCCCAAAAAA CAGTC TTTA AACTG GTTCATTCCGGCATT ACIAD1254 1254083 - 1254205 + | hypothetical protein TERM 1496 1255234 - 1255255 + G 81 -11.7 -2.83164 | opp_overlap 1255220 1255238, overlap 1255238 ATTGGTTGTGGGACA CCAAGCAAA AGTC TTTGCTTGG TATGATAATGAGTGG gap 1254293 - 1255315 + | glyceraldehyde 3-phosphate dehydrogenase TERM 1497 1255445 - 1255460 + GF 100 -6.1 -5.61596 | opp_overlap 1255445 CTAGACTAGGAGAAA TCGGG TGTGCT CCCGA TTTTTTTATGCGGAT ACIAD1256 1255408 - 1255542 + | hypothetical protein TERM 1498 1256517 - 1256536 + GF 72 -9.3 -2.77192 | overlap 1256516 AAACGATTGTCGCAC CTGCTGG ACAAGA CCAGCAG CTTCTTGGCGCAATT hisZ 1255511 - 1256677 + | ATP phosphoribosyltransferase regulatory subunit purA 1256743 - 1258062 + | adenylosuccinate synthetase TERM 1499 1258113 - 1258088 - f 87 -10.5 -3.86835 | opp_overlap 1258088 1258093, overlap 1258093 TGAAATACGACTAAA GAGAAGCTCCT GATC AGGAGCTTTTC TTTTTTAGATAGGTA TERM 1500 1258088 - 1258113 + F 100 -12.7 -5.09895 | opp_overlap 1258088 1258093, overlap 1258093 TGAAATACGACTAAA GAGAAGCTCCT GATC AGGAGCTTTTC TTTTTTAGATAGGTA TERM 1501 1258108 - 1258093 - f 79 -9 -3.87323 | opp_overlap 1258088 1258093, overlap 1258088 TACGACTAAAGAGAA GCTCCT GATC AGGAGC TTTTCTTTTTTAGAT TERM 1502 1258093 - 1258108 + F 95 -9 -5.43553 | opp_overlap 1258093 1258088, overlap 1258088 TACGACTAAAGAGAA GCTCCT GATC AGGAGC TTTTCTTTTTTAGAT ACIAD1259 1258178 - 1258489 + | hypothetical protein ACIAD1260 1258605 - 1259384 + | putative Zn-dependent protease with chaperone function TERM 1503 1259406 - 1259431 + T 86 -10.5 -3.68366 | opp_overlap 1259406 1259408, overlap 1259402 1259408 TGCTTTAGTAAGAAA CACAGGATGTC TTAT GACATCCTGTA TTCATTTTAAGGTGC TERM 1504 1259431 - 1259406 - T 100 -12.7 -4.24342 | opp_overlap 1259406 1259402 1259408, overlap 1259408 TGCTTTAGTAAGAAA CACAGGATGTC TTAT GACATCCTGTA TTCATTTTAAGGTGC TERM 1505 1259429 - 1259408 - T 95 -13.1 -3.72374 | opp_overlap 1259408 1259406 1259402, overlap 1259406 CTTTAGTAAGAAACA CAGGATGTC TTAT GACATCCTG TATTCATTTTAAGGT TERM 1506 1259408 - 1259429 + T 93 -13.1 -3.41761 | opp_overlap 1259406 1259408, overlap 1259406 1259402 CTTTAGTAAGAAACA CAGGATGTC TTAT GACATCCTG TATTCATTTTAAGGT ACIAD1261 1260484 - 1259438 - | oxidoreductase TERM 1507 1259896 - 1259914 + g 70 -7.5 -3.78775 | TATCGATACCAAGCT TTTCTGC CAATT GCAGAAA TTTCATGGTGCCCCA TERM 1508 1260365 - 1260351 - G 75 -5.8 -4.62069 | GCCGTATCCCAAAAA TACAAA CCA TTTGTA AGCGCATAATTGAGT TERM 1509 1260615 - 1260598 - R 100 -9.9 -5.64274 | opp_overlap 1260598, overlap 1260579 CTATTCATAAAAAAA GCAAACC TATA GGTTTGC TCTCTTAAGATTACG TERM 1510 1260598 - 1260615 + r 77 -9.9 -3.10612 | opp_overlap 1260579 1260598 CTATTCATAAAAAAA GCAAACC TATA GGTTTGC TCTCTTAAGATTACG vfr 1261274 - 1260645 - | cAMP-regulatory protein TERM 1511 1261251 - 1261265 + g 78 -4.2 -5.1101 | TGTACGTTTAGGGTA GCGATT AAT ATTCGC TTTTTTCAATAATGC ACIAD1263 1261495 - 1261920 + | hypothetical protein TERM 1512 1261944 - 1261961 + F 93 -7.7 -5.69262 | opp_overlap 1261944 GTTTGAAAAAATGAA GCTGACG TTAA TGTCAGC TTTTTCTTTTTATAG TERM 1513 1261961 - 1261944 - f 73 -7 -3.93166 | opp_overlap 1261944 GTTTGAAAAAATGAA GCTGAC GTTAAT GTCAGC TTTTTCTTTTTATAG ACIAD1264 1262026 - 1262451 + | putative acyltransferase; putative acyltransferase for phosphonate utilization (PhnO) clpB 1262777 - 1265356 + | ATP-dependent protease, Hsp 100, part of multi-chaperone system with DnaK, DnaJ, and GrpE TERM 1514 1265407 - 1265386 - f 83 -5.9 -5.15117 | opp_overlap 1265386, overlap 1265376 TAAAATCTCAAAAAA GAGAATGTG TACG CATATTCTC TTTTTTTATTATTCA TERM 1515 1265386 - 1265407 + F 100 -8.1 -5.95946 | opp_overlap 1265376 1265386 TAAAATCTCAAAAAA GAGAATGTG TACG CATATTCTC TTTTTTTATTATTCA ilvD 1265604 - 1267433 + | dihydroxy-acid dehydratase TERM 1516 1267478 - 1267515 + F 93 -7.1 -5.64274 | opp_overlap 1267478 ATTTTTTCTATTTAA CCTGTAATTTCTTTGTA GATA TGCATTGAGATTACAGG TTTTTTTATGACTGA ACIAD1267 1267642 - 1268082 + | hypothetical protein TERM 1517 1268057 - 1268092 + TF 83 -11.4 -2.8785 | gap 1, overlap 1268059 1268061 CATCTGGAGCAAGGG GAGATGTCAG-TATTAC AGT GAAATAACTGACATCTC TATAATGATTAGTTC ACIAD1268 1270305 - 1268101 - | 23S rRNA m(2)G2445 methyltransferase TERM 1518 1268811 - 1268796 - Gf 79 -5.4 -5.06414 | overlap 1268797 GTGTTTTAATAAAAA TCGCCT CACG AGGCAA ACCTGTGACGGCGCG TERM 1519 1269533 - 1269543 + gF 74 -6.8 -4.4078 | overlap 1269526 ATTTCATGGCGCTCG GCAG CTT CTGC TTTTAATTCAAGCCA ACIAD1269 1270214 - 1270474 + | hypothetical protein pyrB 1270608 - 1271624 + | aspartate carbamoyltransferase catalytic subunit pyrX 1271637 - 1272872 + | aspartate carbamoyltransferase, non-catalytic chain (dihydroorotase-like protein) TERM 1520 1272892 - 1272912 + F 100 -7.6 -5.80364 | opp_overlap 1272892 TAAATCAGTTAAAAA CTCGGCAA AATCA TTGTCGAG TTTTTTTATTAAACT TERM 1521 1272912 - 1272892 - f 74 -5.4 -4.72386 | opp_overlap 1272892 TAAATCAGTTAAAAA CTCGGCAA AATCA TTGTCGAG TTTTTTTATTAAACT ACIAD1272 1273021 - 1274040 + | hypothetical protein TERM 1522 1274069 - 1274085 + F 100 -8 -5.80364 | opp_overlap 1274069 ACTGATATTTGCAAA GGACGA TTGAT TCGTCC TTTTTTTATTGGCAT TERM 1523 1274085 - 1274069 - f 73 -8 -3.5944 | opp_overlap 1274069 ACTGATATTTGCAAA GGACGA TTGAT TCGTCC TTTTTTTATTGGCAT ACIAD1273 1274134 - 1274916 + | hypothetical protein ACIAD1274 1274947 - 1275615 + | putative SAM-dependent methyltransferase TERM 1524 1275751 - 1275738 - g 70 -5.3 -4.46112 | opp_overlap 1275738 CTGCACTGAAACAAA GCATT TTAA AATGC TCATTGATATGCACC ACIAD1275 1275706 - 1275846 + | hypothetical protein TERM 1525 1276070 - 1276096 + F 75 -9.6 -2.66969 | opp_overlap 1276070, overlap 1276066 1276066 1276077 TTAGAAATATATGAA GTCTATATCAAT TAT ATTGATTTAGAC TCGGTTATGTTGATA TERM 1526 1276096 - 1276070 - f 81 -9.6 -3.44444 | opp_overlap 1276070 1276066 1276066 1276077 TTAGAAATATATGAA GTCTATATCAAT TAT ATTGATTTAGAC TCGGTTATGTTGATA TERM 1527 1276626 - 1276636 + G 71 -6.8 -4.1157 | TTAAGTTCAATGATT CCTG CAT CAGG TTCTTCTTATTCATA TERM 1528 1277148 - 1277138 - g 71 -6.8 -4.24123 | opp_overlap 1277137 1277138 TGAAGAAGTTGAAAA TCCG CGT CGGA ATTTACCCTTAGCAA ACIAD1276 1276347 - 1277831 + | putative amino acid transporter ACIAD1277 1277828 - 1278715 + | hypothetical protein ACIAD1279 1278773 - 1281517 + | putative UDP-N-acetylmuramyl tripeptide synthase ACIAD1280 1281525 - 1283720 + | putative exopeptidase ACIAD1281 1283770 - 1284261 + | hypothetical protein TERM 1529 1284725 - 1284709 - g 100 -10.9 -4.62336 | opp_overlap 1284707 1284712 ATGTCATTCGAAAAA CAATGCG CAG CGCATTG TCTGAGTTAAAGCCA ACIAD1282 1284279 - 1285430 + | hypothetical protein TERM 1530 1285443 - 1285474 + T 100 -13.9 -4.24404 | TAAATCTACCGCTGG GATCACGATCAGA TCAAAT TCTGGTCGTGATC TTTTAACATTTCAGT ACIAD1283 1285985 - 1285563 - | AsnC family transcriptional regulator argD 1286124 - 1287335 + | bifunctional succinylornithine transaminase/acetylornithine transaminase astA 1287349 - 1288377 + | arginine succinyltransferase TERM 1531 1288625 - 1288613 - g 71 -4.9 -4.65916 | opp_overlap 1288621, overlap 1288621 GTTACTCGAACAAAA TAAAG AAG CTTTA GCAAAGATTATTAGT TERM 1532 1289710 - 1289691 - g 71 -9.2 -3.05066 | opp_overlap 1289691 AACAAGCCTTTAACA GGTGCGTC TAGT GCCGCACC TTTTGGTGGTGTCGG TERM 1533 1289691 - 1289710 + G 88 -9.2 -4.33274 | opp_overlap 1289691 AACAAGCCTTTAACA GGTGCGTC TAGT GCCGCACC TTTTGGTGGTGTCGG astD 1288380 - 1289849 + | succinylglutamic semialdehyde dehydrogenase TERM 1534 1290084 - 1290105 + G 75 -8.7 -3.73953 | overlap 1290085 GGAGCGTCCGCATGT ACCCAGCTT ACGT AAGCTGGGC TTTGGTGGAGATGAT TERM 1535 1290085 - 1290104 + G 83 -12.2 -2.84051 | overlap 1290084 GAGCGTCCGCATGTA CCCAGCTT ACGT AAGCTGGG CTTTGGTGGAGATGA TERM 1536 1290304 - 1290280 - g 70 -5.2 -4.4634 | gap 1 AATTTGAATAACAAA TTTCATCGTTC AATC GAAC-ATGAAA CAACGAGTCAAATTC astB 1289875 - 1291215 + | succinylarginine dihydrolase TERM 1537 1291347 - 1291326 - g 75 -10.2 -2.76046 | overlap 1291323 GCAATGGCAAGATGA GGGCGTTA TTTGTT TAACGCCC CATCATGGCTATGAA astE 1291234 - 1292211 + | succinylglutamate desuccinylase TERM 1538 1292406 - 1292373 - T 82 -9.8 -3.57462 | gap 2, overlap 1292376 TATTTGATGTTGAAA CAAGCCGATG-T-CCA TATG TGGCAACATCGGCTTG AACAGGATTTGAATG ACIAD1290 1293689 - 1292517 - | hypothetical protein TERM 1539 1293668 - 1293657 - G 71 -3 -4.92239 | opp_overlap 1293657 CCAAAAAGCCAAAAA TGTT AGTG AACA TTTAAATGTACGATA ACIAD1292 1294353 - 1293793 - | hypothetical protein TERM 1540 1294808 - 1294822 + G 76 -2.8 -5.30155 | overlap 1294809 CAGCTTACGCGTGCC AGATGA ACC TCATCA TTTTTTGATTAATCG TERM 1541 1295385 - 1295419 + G 74 -4.4 -4.98857 | overlap 1295372 1295386 TGGGATGCGTGGCAT GCTGCTTTATCATT GATTGAA AAAGATAAAGCAGA TTTTTGTCGTTAGCT TERM 1542 1295386 - 1295418 + G 70 -7.9 -3.5823 | overlap 1295385 GGGATGCGTGGCATG CTGCTTTATCATT GATTGAA AAAGATAAAGCAG ATTTTTGTCGTTAGC ACIAD1293 1294680 - 1295432 + | hypothetical protein ACIAD1294 1296323 - 1295436 - | putative transcriptional regulator (GbuR) ACIAD1295 1296833 - 1297693 + | hypothetical protein ACIAD1296 1297694 - 1298770 + | putative oxidoreductase TERM 1543 1299403 - 1299391 - g 77 -6.3 -4.59773 | CGCCAGCGGCAAAAA TTCTC GTT GAGAA AAGTCGTGGTCGTCT ACIAD1297 1298781 - 1299584 + | amino acid ABC transporter periplasmic substrate-binding protein ACIAD1298 1299607 - 1301136 + | amino acid ABC transporter ATP-binding protein TERM 1544 1301276 - 1301322 + F 72 -6 -4.35116 | opp_overlap 1301277 1301278 1301282, overlap 1301278 1301282 CGCTCTTCTTATCAA ACCAGACTGCTTCAGATC TACATTATCCT GATCTGAAGCAGTTTGAC TTTTAATCTCAGCTA TERM 1545 1301321 - 1301277 - f 83 -10.1 -3.72576 | opp_overlap 1301276 1301278 1301282, overlap 1301278 1301282 GCTCTTCTTATCAAA CCAGACTGCTTCAGATCTACA TTA TCCTGATCTGAAGCAGTTTGA CTTTTAATCTCAGCT TERM 1546 1301320 - 1301278 - f 83 -11.4 -2.83403 | opp_overlap 1301276 1301278 1301282, overlap 1301277 1301282 CTCTTCTTATCAAAC CAGACTGCTTCAGATCTACA TTA TCCTGATCTGAAGCAGTTTG ACTTTTAATCTCAGC TERM 1547 1301278 - 1301320 + F 87 -13 -2.51871 | opp_overlap 1301278 1301277 1301282, overlap 1301276 1301282 CTCTTCTTATCAAAC CAGACTGCTTCAGATC TACATTATCCT GATCTGAAGCAGTTTG ACTTTTAATCTCAGC TERM 1548 1301282 - 1301316 + F 93 -10.2 -3.95448 | opp_overlap 1301282 1301278 1301277, overlap 1301278 1301276 TCTTATCAAACCAGA CTGCTTCAGATC TACATTATCCT GATCTGAAGCAG TTTGACTTTTAATCT TERM 1549 1301316 - 1301282 - f 83 -10.8 -3.03701 | opp_overlap 1301278 1301276 1301282, overlap 1301278 1301277 TCTTATCAAACCAGA CTGCTTCAGATCTACA TTA TCCTGATCTGAAGCAG TTTGACTTTTAATCT TERM 1550 1301603 - 1301617 + G 80 -10 -3.64049 | GCGTTTTGGTGGTAT CGCATC CAT GATGCG TTTACCCGTTATTGA speB 1301544 - 1302503 + | agmatinase TERM 1551 1302717 - 1302707 - g 70 -5.4 -4.49781 | AAAATATGGAGAAAA CAAC AGT GTTG AATCGCATATCTTTC TERM 1552 1302927 - 1302917 - g 74 -4 -5.02476 | opp_overlap 1302917 ATATCGGTGAAAAAA TTCT TAA AGAA TGTTTGTTTATTTTG ACIAD1300 1302679 - 1303695 + | putative transcriptional regulator ACIAD1301 1303769 - 1304728 + | putative glycerate dehydrogenase TERM 1553 1304854 - 1304826 - T 100 -9.8 -5.86609 | opp_overlap 1304826 1304843 1304845, overlap 1304843 GTAAAAAAATAAAAA TCGCATTAAACA GTTAA TATTTAATGCGA TTAAATATGGTATCA trmB 1305624 - 1304887 - | tRNA(guanine-7)methyltransferase TERM 1554 1305146 - 1305162 + g 73 -2.9 -5.24129 | TCATGAATAACGAAA CGGCGTT TAA AATGACG TTTTTTCTGCCACGG TERM 1555 1305529 - 1305513 - G 72 -9.3 -3.18264 | GCTGCGAGGTATTAA GCGGCGC AGA GCGACGC ATAAATGTCACAATT TERM 1556 1306484 - 1306498 + G 77 -5 -4.97402 | overlap 1306485 TATCACAGCCGATTA TCGTTA CAG TAACGG TTTTTCTGGCTTTTA TERM 1557 1306958 - 1306946 - g 77 -4.8 -5.01497 | opp_overlap 1306946 ATTAGCACAGAAAAA CCTG CTCTC CAGG ATTATTCTGGACGAT TERM 1558 1308165 - 1308145 - g 76 -6.7 -4.44046 | opp_overlap 1308145 1308142 TGGACTTGAAAGAAA GTGCGCAGC AAG GCGGCGTAC TGAATTTTATTCAGC ACIAD1303 1305798 - 1308221 + | putative extracellular nuclease TERM 1559 1308273 - 1308296 + T 74 -2.4 -5.52023 | opp_overlap 1308273 TGAACAAATACACAG GAATATCACT TGCA AGGGAAATTC TTTTTTATTAATAGT ACIAD1304 1308421 - 1308278 - | hypothetical protein ACIAD1305 1308423 - 1309034 + | putative glutathionine S-transferase TERM 1560 1309051 - 1309070 + T 88 -7.2 -5.09762 | opp_overlap 1309051 1309053, overlap 1309053 TTCACGCAGAAAAAA TGCCTCAA GTAA TTGAGGTA TTTTTCTATTCAAAT TERM 1561 1309070 - 1309051 - T 80 -5 -5.28176 | opp_overlap 1309051 1309053, overlap 1309053 TTCACGCAGAAAAAA TGCCTCAA GTAA TTGAGGTA TTTTTCTATTCAAAT TERM 1562 1309053 - 1309068 + T 78 -7.6 -4.17211 | opp_overlap 1309051 1309053, overlap 1309051 CACGCAGAAAAAATG CCTCAA GTAA TTGAGG TATTTTTCTATTCAA ACIAD1306 1309765 - 1309076 - | putative signal peptide TERM 1563 1309812 - 1309797 - R 83 -7.6 -4.72272 | opp_overlap 1309797 TGTTTTTATGAAAAA GGATTC CGAA GAATCC TTTGAAACTTTTCAA TERM 1564 1309797 - 1309812 + r 71 -7.6 -3.66666 | opp_overlap 1309797 TGTTTTTATGAAAAA GGATTC CGAA GAATCC TTTGAAACTTTTCAA thiG 1310630 - 1309845 - | thiazole synthase thiS 1310841 - 1310644 - | C-terminally thiocarboxylated form IS intermediate sulfur donor in thiazole formation; part of ThiF/ThiS complex; complexes with ThiG also ACIAD1310 1311219 - 1310854 - | hypothetical protein TERM 1565 1311298 - 1311310 + r 79 -9.1 -3.36766 | opp_overlap 1311298, overlap 1311293 TTAAACAAAACAAAA GGGCA TGA TGCCC TTAAGTTTCTATATG TERM 1566 1311310 - 1311298 - R 100 -9.1 -5.34857 | opp_overlap 1311298 1311293 TTAAACAAAACAAAA GGGCA TGA TGCCC TTAAGTTTCTATATG rpoH 1312211 - 1311342 - | RNA polymerase factor sigma-32 ACIAD1312 1312591 - 1312343 - | hypothetical protein TERM 1567 1313158 - 1313140 - g 71 -4.6 -4.66833 | opp_overlap 1313148, overlap 1313141 GTTCAAGGTCAAAAA GGTTTTCA GGC TGAAAACG TTCAGCCTTTAGACT TERM 1568 1313148 - 1313165 + G 80 -9.9 -3.62275 | opp_overlap 1313141 1313140 TCAAAAAGGTTTTCA GGCTGAA AACG TTCAGCC TTTAGACTAATCAAT ACIAD1313 1312963 - 1313175 + | putative cold shock protein TERM 1569 1313192 - 1313176 - f 70 -8.1 -3.2614 | CAGCCTTTAGACTAA TCAATCT TTT AGATTGA GAAACGCTCCAATTT TERM 1570 1313221 - 1313197 - f 100 -15.9 -3.95073 | opp_overlap 1313197 TTTTAGATTGAGAAA CGCTCCAATTT TTT AAATTGGAGCG TTTTTGTTTTATACT TERM 1571 1313197 - 1313221 + F 100 -15.9 -5.56263 | opp_overlap 1313197 TTTTAGATTGAGAAA CGCTCCAATTT TTT AAATTGGAGCG TTTTTGTTTTATACT rhlB 1313277 - 1314428 + | ATP-dependent RNA helicase RhlB TERM 1572 1314449 - 1314466 + T 93 -7 -5.4251 | opp_overlap 1314449, overlap 1314442 GTTAATTATGAAAAA GATCCC ATTTTA GGGATC TTTTTTGTATCTGGG TERM 1573 1314466 - 1314449 - T 83 -7 -4.81083 | opp_overlap 1314449 1314442 GTTAATTATGAAAAA GATCCC ATTTTA GGGATC TTTTTTGTATCTGGG ACIAD1315 1314817 - 1314494 - | hypothetical protein TERM 1574 1314703 - 1314713 + g 73 -2.6 -5.09426 | overlap 1314699 TTTTATTAGCAGCAG TAAT TGC ATTA TTTTTTGAAATTACA ACIAD1316 1315070 - 1315654 + | putative nitroreductase TERM 1575 1316002 - 1316019 + G 71 -8.5 -3.48276 | TTCATTTCGTGAGGT GGTGAAA CAGA TTTCACC TTATATCACGGCACA gpsA 1315685 - 1316758 + | NAD(P)H-dependent glycerol-3-phosphate dehydrogenase ACIAD1318 1316815 - 1317270 + | putative phosphohistidine phosphatase ACIAD1319 1317299 - 1318438 + | general secretion pathway protein L ACIAD1320 1318438 - 1318920 + | hypothetical protein TERM 1576 1319802 - 1319813 + G 73 -5.8 -4.57073 | AAGCGGGTGGTTTGT CAGG CGCT CCTG TTTTTGAAAAAAGTA pyrD 1319012 - 1320016 + | dihydroorotate dehydrogenase 2 ACIAD1322 1320077 - 1320607 + | putative membrane protein required for colicin V production (CvpA) TERM 1577 1320739 - 1320753 + G 73 -5.6 -4.55295 | overlap 1320741 AGCTGGGATTGTAAC CTGCCA TGA TGGCCG TTTATTTCTCAGAAA purF 1320632 - 1322170 + | amidophosphoribosyltransferase TERM 1578 1322181 - 1322209 + F 100 -12.6 -4.5442 | opp_overlap 1322188, overlap 1322188 TATAAGATTTGTTGA TGAAAAAGCGGG TTTTT CCCGCTTTTTTA TTTTATGATTGGACA TERM 1579 1322202 - 1322188 - f 93 -8.5 -4.72272 | opp_overlap 1322181 1322188 TTTGTTGATGAAAAA GCGGG TTTTT CCCGC TTTTTTATTTTATGA TERM 1580 1322188 - 1322202 + F 100 -8.5 -5.86976 | opp_overlap 1322188, overlap 1322181 TTTGTTGATGAAAAA GCGGG TTTTT CCCGC TTTTTTATTTTATGA TERM 1581 1322609 - 1322597 - g 80 -6.3 -4.8543 | opp_overlap 1322588, overlap 1322599 CAATTGGCAGAAAAA TTTGC TTT GCAAA CACCATCGCTTTATG TERM 1582 1323645 - 1323666 + G 76 -8.1 -4.07618 | CAGCCAGCATTGCAC GCCAATTTT TAAC AAGATTGGC TTTAATTATTCAAGA ACIAD1324 1322246 - 1324141 + | hypothetical protein ACIAD1326 1324267 - 1324881 + | hypothetical protein tkrA 1324892 - 1325857 + | 2-keto-D-gluconate reductase (2-ketoaldonate reductase) TERM 1583 1326169 - 1326154 - g 71 -4.8 -4.60924 | CAAATCGGCGAAAAA GTATTT CGAG AAATAC AAAAGCAGATGCCTG ACIAD1328 1325989 - 1327434 + | putative signal peptide ACIAD1329 1327526 - 1327876 + | hypothetical protein ACIAD1330 1328368 - 1327925 - | hypothetical protein TERM 1584 1328207 - 1328257 + g 76 -9.9 -3.338 | gap 2, opp_overlap 1328224, overlap 1328221 CTGTTTAATTTGCTT TTCGATGACCGCAA-GAACTTG-CG CGT CGTCAAGCTCTTTGCGCTCATCGAC TTCGATTTGCTTAAT rpsU 1328621 - 1328406 - | 30S ribosomal protein S21 TERM 1585 1328672 - 1328647 - H 93 -12.7 -3.38768 | CTAGATTATGGATAA CATCTAACGCA CCAT TGCGCTAGATG ACAAGTGAAGGTCAG ACIAD1332 1328767 - 1329789 + | putative O-sialoglycoprotein endopeptidase gcp TERM 1586 1329801 - 1329831 + T 72 -9.1 -2.75561 | opp_overlap 1329791, overlap 1329800 ATAAATCAAAACATG TTTGACGAAGTTG ATCCA CAGCTTCGTCAGG ATTGATTTAATGTAT ACIAD1333 1331010 - 1329838 - | hypothetical protein TERM 1587 1330880 - 1330858 - G 75 -7.1 -4.30576 | TGTGTAGGAGTAAAA TTCGTCTTC TGTAT GAAAACGAA GTATATGATCATGTT ACIAD1334 1332007 - 1331117 - | hypothetical protein TERM 1588 1333137 - 1333120 - g 73 -2.7 -5.1861 | gap 1 CTGACCAGTAAAAAA CGTGACGG TAG CCAT-ACG CCTTATATGGCCAAT ACIAD1335 1332175 - 1333680 + | hypothetical protein TERM 1589 1334411 - 1334393 - g 71 -6.8 -4.21194 | TTCCATTATTTAAAA TCTTGCTT GCA AAGCAAAA AGAGCAACGTTGCGC TERM 1590 1334464 - 1334447 - g 71 -4.2 -4.77986 | TCAAACAGGCAAAAA TAAGCT TTGAAC AGCTTA AATTGTCGATATAAT ACIAD1336 1333684 - 1334478 + | protein kinase TERM 1591 1334959 - 1334978 + F 100 -12.2 -5.75478 | opp_overlap 1334959 TAAATGGCATAAAAA CCCACCAT AATT ATGGTGGG TTTTTTTATGTCGTT TERM 1592 1334978 - 1334959 - f 100 -12.2 -4.89393 | opp_overlap 1334959 TAAATGGCATAAAAA CCCACCAT AATT ATGGTGGG TTTTTTTATGTCGTT TERM 1593 1335260 - 1335242 - f 71 -7.5 -3.55304 | opp_overlap 1335241 1335238, overlap 1335238 ACATTTAATAATCAA CTATGCA TTTTT TGCATAG ATAAATTGTTTTTTG ACIAD1338 1335307 - 1335438 + | hypothetical protein TERM 1594 1336554 - 1336568 + G 100 -8.6 -4.78753 | opp_overlap 1336556 TGACTATGTTTAAGC TACCAG AAG CTGGTA TTTTATTGATCTTGG ACIAD1339 1335452 - 1336750 + | putative glutamate symport transmembrane protein TERM 1595 1336807 - 1336792 - f 83 -10.4 -3.16203 | opp_overlap 1336792, overlap 1336790 1336788 1336786 TCACGATAATAGAGA GCCTGC ATAA GCAGGC TTTTTTGTATTTGAT TERM 1596 1336792 - 1336807 + F 100 -10.4 -5.5762 | opp_overlap 1336792 1336790 1336788 1336786 TCACGATAATAGAGA GCCTGC ATAA GCAGGC TTTTTTGTATTTGAT ACIAD1340 1336915 - 1337115 + | hypothetical protein ACIAD1341 1337593 - 1337129 - | hypothetical protein TERM 1597 1337621 - 1337602 - R 100 -9.3 -5.48213 | opp_overlap 1337602 1337620 CACCCAAAAGAAAAA CCCACTC GCAAAT GAGTGGG TTTTCAAAATCTTGG TERM 1598 1337602 - 1337621 + r 93 -10 -4.14472 | opp_overlap 1337602, overlap 1337620 CACCCAAAAGAAAAA CCCACTCG CAAA TGAGTGGG TTTTCAAAATCTTGG ACIAD1342 1337962 - 1337819 - | hypothetical protein aroP 1338008 - 1339384 + | aromatic amino acid APC transporter TERM 1599 1339621 - 1339611 - g 71 -6.8 -4.18421 | CAAGCAGAGAAACAA CCCA TTA TGGG GATGATCGAGATTAA TERM 1600 1339875 - 1339862 - g 78 -5.3 -4.93877 | GCGTATTAAAGAAAA TCATC AGAT GATGA ATACAGGAAAGTCAA ACIAD1344 1339416 - 1339907 + | putative transcriptional regulator TERM 1601 1339974 - 1339986 + G 71 -4.8 -4.64024 | AGATATGCTGGCGAT GGTC ATTGC GACC TTTATTATTTCATTT ACIAD1345 1339900 - 1340526 + | hypothetical protein TERM 1602 1340548 - 1340566 + T 79 -4.5 -5.36441 | ACGAGAGACAAGGAA GCAGTGT CTAAC GCGCTGC TTTTTTATGTAGGAA TERM 1603 1340622 - 1340598 - T 100 -15.9 -5.2112 | opp_overlap 1340598 AAGAGCATTAAAAAA CCCTCATATTG AAT CAATATGAGGG TTTTGAATCTGGCTC TERM 1604 1340598 - 1340622 + T 100 -15.9 -4.24204 | opp_overlap 1340598 AAGAGCATTAAAAAA CCCTCATATTG AAT CAATATGAGGG TTTTGAATCTGGCTC TERM 1605 1340931 - 1340948 + T 73 -7 -3.90762 | opp_overlap 1340931 1340935, overlap 1340929 TCTGATGTAAAAAAA CCACTC AATAAA GAGTGG TCTTTTTGAAAAATA TERM 1606 1340948 - 1340931 - T 93 -7 -5.47218 | opp_overlap 1340931 1340929, overlap 1340935 TCTGATGTAAAAAAA CCACTC AATAAA GAGTGG TCTTTTTGAAAAATA sodB 1341596 - 1340970 - | superoxide dismutase ACIAD1347 1342561 - 1341803 - | hypothetical protein algW 1342738 - 1343916 + | HtrA-like serine protease TERM 1607 1343967 - 1343925 - T 82 -8.9 -4.06281 | gap 1, opp_overlap 1343938 1343961, overlap 1343927 1343928 1343938 ACGCTAAATAAAACA GATTAATAAAAAAGGAATAC TTTG GTATTCCTTTTTTATTA-TG AATATTTCTTAATTC TERM 1608 1343966 - 1343927 - T 100 -14 -3.61331 | opp_overlap 1343938 1343961, overlap 1343925 1343928 1343938 GCTAAATAAAACAGA TTAATAAAAAAGGAATAC TTTG GTATTCCTTTTTTATTAT GAATATTTCTTAATT TERM 1609 1343965 - 1343928 - T 100 -17.5 -2.75714 | opp_overlap 1343938 1343961, overlap 1343927 1343925 1343938 CTAAATAAAACAGAT TAATAAAAAAGGAATAC TTTG GTATTCCTTTTTTATTA TGAATATTTCTTAAT TERM 1610 1343938 - 1343955 + T 95 -8.5 -5.56673 | opp_overlap 1343928 1343927 1343925 1343938 CAGATTAATAAAAAA GGAATAC TTTG GTATTCC TTTTTTATTATGAAT TERM 1611 1343955 - 1343938 - T 95 -8.5 -5.5353 | opp_overlap 1343938, overlap 1343928 1343927 1343925 CAGATTAATAAAAAA GGAATAC TTTG GTATTCC TTTTTTATTATGAAT ACIAD1349 1344658 - 1344050 - | hypothetical protein ACIAD1350 1344981 - 1344673 - | hypothetical protein ACIAD1351 1346002 - 1344998 - | putative sugar kinase protein TERM 1612 1345465 - 1345480 + g 72 -7.5 -3.9243 | TTACACCATGTTCAC GCGCG ATTTTA CGCGC TTGTTTCACAGCTTG ACIAD1353 1346311 - 1349250 + | putative metalloprotease ACIAD1354 1349277 - 1350437 + | putative phospholipase A1 precursor (PldA) TERM 1613 1350508 - 1350529 + T 73 -4.4 -4.99568 | opp_overlap 1350508, overlap 1350506 CCAATTTGAATATCA GCCGAC GGATGTTTAA GTCGGC TTTTCTTTGGTGTTG ACIAD1355 1351826 - 1350489 - | putative potassium uptake protein (TrkH) TERM 1614 1351349 - 1351336 - G 90 -2.4 -6.00086 | overlap 1351347 ATACTATAAAAAAAA GCAT AATACA ATGC ATGAAAAAATCCGAA TERM 1615 1351785 - 1351762 - G 100 -8.8 -5.10029 | opp_overlap 1351761 ATGAAGCTTAAAAAA CCCAGCGCCA GCAT TGACGGTGGG CTTAAATTAAATGTT ACIAD1356 1352478 - 1351807 - | putative potassium uptake protein TERM 1616 1352198 - 1352212 + g 71 -2.1 -5.09225 | GCTTTTACCCAAATC TGTGG AACTC CCATA TTTTTTAAATGAAGT TERM 1617 1352609 - 1352587 - R 100 -7.1 -5.82281 | gap 1, opp_overlap 1352587 1352606 AAAGATATAAAAAAA CCGACAGTTC GCAA GAA-TGTCGG TTGGTGAGAACAATC TERM 1618 1352606 - 1352626 + r 72 -4.7 -4.72272 | opp_overlap 1352587 1352624, overlap 1352587 1352624 CAGTTCGCAAGAATG TCGGTTGGT GAG AACAATCGA TTTTTACTGCAAAAA ilvA 1354168 - 1352630 - | threonine dehydratase TERM 1619 1353236 - 1353220 - G 70 -9.5 -2.74784 | overlap 1353216 ATCGGTCAAAATTCA TGTTTGC ACC GCAAACA ATCGAAACGATATTT TERM 1620 1354329 - 1354307 - g 79 -3.4 -5.36965 | opp_overlap 1354313, overlap 1354310 CAAGATGAGAAAAAA CAAGCAGC GGCAAAA GCTGCTTT AAAACACTTACCAAA TERM 1621 1354326 - 1354310 - g 75 -5.1 -4.74611 | opp_overlap 1354313, overlap 1354307 GATGAGAAAAAACAA GCAGC GGCAAAA GCTGC TTTAAAACACTTACC rpiA 1354274 - 1354945 + | ribose-5-phosphate isomerase A TERM 1622 1355017 - 1354975 - g 71 -10 -2.5893 | opp_overlap 1354983 1354989, overlap 1354974 1354973 1354983 CCTGAAATCAAAATT GTTAGACACGTAAATGCAAA ATG CTTGCGTTTACGTGTTGAAC CTCATGCTATTAGAT TERM 1623 1354983 - 1355009 + G 76 -10.3 -3.04792 | opp_overlap 1354983 1354975 1354974 1354973, overlap 1354989 CAAAATTGTTAGACA CGTAAATGCAA AATGC TTGCGTTTACG TGTTGAACCTCATGC ACIAD1359 1354945 - 1355619 + | hypothetical protein TERM 1624 1356226 - 1356199 - g 71 -8.4 -3.54575 | overlap 1356197 1356207 GTGAAAAAATCAAGA CAGCCAAAGTTG TTGG CAACCCAGGCTG TTACCCAACAACTGT argC 1355781 - 1356830 + | N-acetyl-gamma-glutamyl-phosphate reductase TERM 1625 1356844 - 1356883 + F 79 -8.8 -3.77303 | opp_overlap 1356844, overlap 1356849 AATGACGTTTTAAGA CTTCACACACATTTCAAT TTCG ATTTAAATGTGTGTTGAG TTCTATCTTTAAATC TERM 1626 1356849 - 1356878 + F 77 -9.5 -3.29581 | opp_overlap 1356844, overlap 1356844 CGTTTTAAGACTTCA CACACATTTCAAT TTCG ATTTAAATGTGTG TTGAGTTCTATCTTT ACIAD1361 1356926 - 1357660 + | hypothetical protein clpS 1357679 - 1358092 + | substrate modulator for ClpAP, directs protease activity towards aggregated proteins clpA 1358102 - 1360378 + | ATP-binding protease component TERM 1627 1360401 - 1360429 + F 100 -14.8 -4.21607 | opp_overlap 1360404, overlap 1360404 TAGATGACATTTCAA TAACCCGAATAC TGAGT GTATTCGGGTTA TTTATATTGACTGCG TERM 1628 1360426 - 1360404 - f 91 -12.1 -3.67112 | opp_overlap 1360401 1360404 ATGACATTTCAATAA CCCGAATAC TGAGT GTATTCGGG TTATTTATATTGACT TERM 1629 1360404 - 1360426 + F 100 -12.1 -4.22375 | opp_overlap 1360404, overlap 1360401 ATGACATTTCAATAA CCCGAATAC TGAGT GTATTCGGG TTATTTATATTGACT ACIAD1364 1360436 - 1360741 + | hypothetical protein ACIAD1365 1361643 - 1360744 - | putative esterase/lipase TERM 1630 1360894 - 1360906 + g 77 -6.3 -4.68593 | ATCTAGAGCCTGATG TAGCA GAA TGCTA TTTTTAACTGATGAG TERM 1631 1361782 - 1361760 - R 86 -4.8 -5.68438 | opp_overlap 1361760 1361781 TTATGAAATAAAAAA GCCCATAG TGCTTGG CTAGGGGC TTTTTAAAATGTTTA TERM 1632 1361760 - 1361782 + r 74 -5.5 -4.6856 | opp_overlap 1361760, overlap 1361781 TTATGAAATAAAAAA GCCCATAGT GCTTG GCTAGGGGC TTTTTAAAATGTTTA TERM 1633 1361782 - 1361802 + r 71 -8.5 -3.12976 | overlap 1361781 GTGCTTGGCTAGGGG CTTTTTAAA ATG TTTAAAAAG ATTTTAGGCTCTTTT argF 1362726 - 1361806 - | ornithine carbamoyltransferase TERM 1634 1362210 - 1362241 + g 70 -8.1 -3.65046 | overlap 1362212 GCTTGAAACCCATCA TGTGTGCAGCTTC CATATA GGAGTTGCACATA TTATTCCCATCGCCA TERM 1635 1362212 - 1362239 + g 71 -8.5 -3.40611 | overlap 1362210 TTGAAACCCATCATG TGTGCAGCTTC CATATA GGAGTTGCACA TATTATTCCCATCGC ACIAD1367 1363483 - 1362827 - | putative transcriptional regulator glnG 1365106 - 1363631 - | two-component regulatory system response regulator TERM 1636 1364338 - 1364352 + g 70 -5.7 -4.32857 | opp_overlap 1364338 CACCATCTGCCAATA CACGT AATAA ACGTG TTTGTGTTTCAAAAG glnL 1366202 - 1365093 - | sensory kinase (soluble) in two-component regulatory system TERM 1637 1365467 - 1365482 + g 76 -7.6 -4.1899 | GCATGACTTGTATGA GCTGAT CTCG ATCAGC TTTTACATCGGGTAG ACIAD1371 1366542 - 1367885 + | hypothetical protein pyrH 1367938 - 1368666 + | uridylate kinase TERM 1638 1368808 - 1368792 - g 78 -9.5 -3.69483 | overlap 1368790 AGCGTATGCAAAAGA CTCTAGA GTC TCTAGAG CAGGGTTTTGCGAAA frr 1368746 - 1369300 + | ribosome releasing factor TERM 1639 1369365 - 1369340 - g 93 -12 -3.64716 | opp_overlap 1369339 1369338 1369338, overlap 1369338 TCATCTTCCAAAACA TGTTGCCATC ATTATG GATGGCAACA ATCGTTTTGCTAAAA ispU 1369305 - 1370054 + | undecaprenyl pyrophosphate synthetase (di-trans,poly-cis-decaprenylcistransferase) cdsA 1370057 - 1370881 + | phosphatidate cytidylyltransferase dxr 1370882 - 1372078 + | 1-deoxy-D-xylulose 5-phosphate reductoisomerase ACIAD1377 1372083 - 1373438 + | putative membrane-associated Zn-dependent protease 1 TERM 1640 1374646 - 1374635 - g 79 -3 -5.32565 | CAAGTAATGAAAAAA TTGA CTTG TCAA AAATTCGCCTTGAAC ACIAD1378 1373479 - 1375956 + | putative outer membrane protein TERM 1641 1375940 - 1375966 + F 100 -10.2 -5.24796 | opp_overlap 1375940, overlap 1375942 CTATTCAATTTGAAA TTGGCCGTACTT TCT AAGTACGGTCTA TTTTTATTGTATAAA TERM 1642 1375966 - 1375940 - f 73 -8 -3.6715 | opp_overlap 1375940 1375942 CTATTCAATTTGAAA TTGGCCGTACTT TCT AAGTACGGTCTA TTTTTATTGTATAAA TERM 1643 1375942 - 1375964 + F 100 -12.8 -4.24787 | opp_overlap 1375940, overlap 1375940 ATTCAATTTGAAATT GGCCGTACTT TCT AAGTACGGTC TATTTTTATTGTATA TERM 1644 1376029 - 1376015 - g 89 -3.6 -5.63374 | TGAATATGAAAAAAA TGACTA AAT TAATCA TGGTATTAGGTATTA TERM 1645 1376445 - 1376433 - g 71 -3.4 -5.06414 | opp_overlap 1376433 TGTTTTGAATAAAAA TGCA GTGAT TGCA TCTGATATAAAAGAT ACIAD1379 1376005 - 1376505 + | putative outer membrane protein (OmpH) TERM 1646 1376542 - 1376563 + G 100 -9.5 -4.77036 | TCATTGGAAACTTTA GCTCATCTT GTTC AAGGTGAGC TTTTTGGTGATGAGC lpxD 1376509 - 1377579 + | UDP-3-O-[3-hydroxylauroyl] glucosamine N-acyltransferase fabZ 1377583 - 1378071 + | (3R)-hydroxymyristoyl-[acyl carrier protein] dehydratase lpxA 1378068 - 1378856 + | UDP-N-acetylglucosamine acyltransferase TERM 1647 1378864 - 1378912 + T 72 -9.2 -2.55085 | opp_overlap 1378880, overlap 1378880 TGCGTTAAATACCTC ATAATTAATAAAAAAAGACACC ATTTA GGTGTCTTTTTTTGTAGATTAA AATTTATTTAAAGTA TERM 1648 1378896 - 1378880 - T 100 -8 -5.87996 | opp_overlap 1378864 1378880 TAATTAATAAAAAAA GACACC ATTTA GGTGTC TTTTTTTGTAGATTA TERM 1649 1378880 - 1378896 + T 93 -8 -5.66684 | opp_overlap 1378880, overlap 1378864 TAATTAATAAAAAAA GACACC ATTTA GGTGTC TTTTTTTGTAGATTA ACIAD1383 1379743 - 1378916 - | putative signal peptide TERM 1650 1379481 - 1379495 + g 95 -7.2 -5.42514 | TCAAGATCTGTATAT CGATTT TGT AAATCG TTTTTTAATTTGTCA recX 1380634 - 1380155 - | regulatory protein TERM 1651 1380673 - 1380660 - R 100 -9.5 -5.37593 | opp_overlap 1380660 TTTCAAATGAAAAAA CGCCC ATTT GGGCG TTTAATTGGATGCTT TERM 1652 1380660 - 1380673 + r 85 -9.5 -3.94404 | opp_overlap 1380660 TTTCAAATGAAAAAA CGCCC ATTT GGGCG TTTAATTGGATGCTT recA 1381741 - 1380692 - | recombinase A hslR 1382342 - 1381899 - | heat shock protein 15 TERM 1653 1382204 - 1382222 + g 79 -8.2 -4.1466 | opp_overlap 1382203 TGGAAACTTTAACAC GTTCACTA TTG TGGTGAAC TTTTCCGCCTTCGAT TERM 1654 1382402 - 1382378 - H 70 -7.3 -3.84619 | AAAGTGCAAACAGAA TCTATTTTGAT AGT ATCAAGATAGA AGATGCAATATAGCT TERM 1655 1382580 - 1382567 - H 90 -8.1 -5.25735 | opp_overlap 1382567 TCAAAAAATTAAAAA GCCAC GTGA GTGGC TTTACTTAGGGCTTA TERM 1656 1382567 - 1382580 + H 79 -8.1 -3.91798 | opp_overlap 1382567 TCAAAAAATTAAAAA GCCAC GTGA GTGGC TTTACTTAGGGCTTA TERM 1657 1382763 - 1382775 + H 84 -6.3 -5.03713 | opp_overlap 1382757 ATGTAAAAATGTGAT TCTTG TCA CAAGA TTTTGTTTAATTGTT cysQ 1382955 - 1383815 + | PAPS (adenosine 3'-phosphate 5'-phosphosulfate) 3'(2'),5'-bisphosphate nucleotidase, converts PAPS to APS ACIAD1388 1383917 - 1384606 + | hypothetical protein TERM 1658 1384663 - 1384618 - T 84 -8 -4.53077 | gap 2, opp_overlap 1384625 1384626 1384634, overlap 1384619 1384626 1384634 TTAAAATAAAAAATA CTTAGCAA--TAAAAAAAGCCC TGAA GGGCTTTTTTTACTTTGCTAAC TTAGTTAGAAGCTAA TERM 1659 1384662 - 1384619 - T 87 -11.5 -3.29406 | gap 2, opp_overlap 1384625 1384626 1384634, overlap 1384618 1384626 1384634 TAAAATAAAAAATAC TTAGCAA--TAAAAAAAGCCC TGAA GGGCTTTTTTTACTTTGCTAA CTTAGTTAGAAGCTA TERM 1660 1384625 - 1384654 + T 90 -10.9 -3.80516 | opp_overlap 1384619 1384618 1384626 1384634, overlap 1384626 1384634 AAAAAATACTTAGCA ATAAAAAAAGCCC TGAA GGGCTTTTTTTAC TTTGCTAACTTAGTT TERM 1661 1384653 - 1384626 - T 95 -14.4 -3.25312 | opp_overlap 1384626 1384625 1384634, overlap 1384619 1384618 1384634 AAAAATACTTAGCAA TAAAAAAAGCCC TGAA GGGCTTTTTTTA CTTTGCTAACTTAGT TERM 1662 1384626 - 1384653 + T 93 -14.4 -2.87586 | opp_overlap 1384619 1384618 1384626 1384634, overlap 1384625 1384634 AAAAATACTTAGCAA TAAAAAAAGCCC TGAA GGGCTTTTTTTA CTTTGCTAACTTAGT TERM 1663 1384645 - 1384634 - T 100 -7.2 -5.84381 | opp_overlap 1384634 1384626 1384625, overlap 1384626 1384619 1384618 TTAGCAATAAAAAAA GCCC TGAA GGGC TTTTTTTACTTTGCT TERM 1664 1384634 - 1384645 + T 93 -7.2 -5.73563 | opp_overlap 1384626 1384619 1384618 1384634, overlap 1384626 1384625 TTAGCAATAAAAAAA GCCC TGAA GGGC TTTTTTTACTTTGCT rpsT 1384933 - 1384664 - | 30S ribosomal protein S20 TERM 1665 1384700 - 1384720 + g 78 -5.3 -4.97405 | opp_overlap 1384700 AACTTGAGCATTTAA GCGGCTCTT ATG ACGAGCAGC TTTATTTTTGTGGAT TERM 1666 1384879 - 1384906 + g 80 -2.6 -5.47218 | opp_overlap 1384860, overlap 1384879 1384880 AACTTGCGTTATGTT TGCGCGCTTTAA CGTT TTGACGCGCACG TTTTTTTGCCTGAGC ACIAD1390 1385143 - 1385805 + | hypothetical protein TERM 1667 1385894 - 1385912 + G 87 -5.3 -5.43866 | gap 1 ATATTCAAGTGCTTA CG-CCATC ACTA GATGGACG TTTTTTTAAAAGTTA menG 1385821 - 1386333 + | ribonuclease activity regulator protein RraA ACIAD1392 1386362 - 1387144 + | hypothetical protein TERM 1668 1387184 - 1387206 + F 91 -5.6 -5.80248 | TATTGTCATCAGGAG GCATTCATAT TCA AAGTGAATGC TTTTTTTATATATTA TERM 1669 1388173 - 1388183 + G 75 -3.2 -5.24129 | TTAGTACTGCATTGA CAGG AAC CTTG TTTTTTGTACCAACA ACIAD1393 1387290 - 1388231 + | putative iron-dependent peroxidase ACIAD1394 1388270 - 1388626 + | hypothetical protein TERM 1670 1389448 - 1389463 + G 71 -3.2 -4.96468 | ACTGGATGGAATTGC CTCACC AGGT GTTGAG TTTTATTTGCCTTTA TERM 1671 1391768 - 1391779 + G 70 -5.8 -4.37658 | TTAGGCGATGTACAT CAGC GTTT GCTG TTTTATAAACGAATT TERM 1672 1392050 - 1392023 - g 71 -4.8 -4.66609 | overlap 1392026 1392030 CAGCTCATGCAAAAA CAACCCACATAC TATC GTATGGAGGGTG GTCAGCGTCTAAAGG TERM 1673 1392047 - 1392026 - g 70 -5.1 -4.44608 | overlap 1392023 1392030 CTCATGCAAAAACAA CCCACATAC TATC GTATGGAGG GTGGTCAGCGTCTAA mfd 1388642 - 1392157 + | transcription-repair coupling protein TERM 1674 1392344 - 1392302 - f 82 -8.7 -3.90298 | gap 1, opp_overlap 1392297 1392314 TGTAAGTAAAGACAA GGCTAATAATATTCACATCA TGAC TGATGTGG-TAGTATTAGCC ATCACTATCATTGCG ACIAD1396 1392383 - 1392808 + | hypothetical protein TERM 1675 1393242 - 1393252 + G 81 -5.4 -5.14626 | overlap 1393239 TGGCTGTATTATCAG GCAT AGC ATGC TTTTATTTTCATACT ACIAD1397 1392866 - 1394323 + | putative adenylate or guanylate cyclase TERM 1676 1394347 - 1394328 - T 100 -10.8 -5.4588 | TAAAATCATAAAAAA GCCTTCTA TAAA TAGAAGGC CTGATAAGATGAGAC fdx 1394710 - 1394372 - | [2FE-2S] ferredoxin, electron carrer protein, believed to be involved in assembly of Fe-S clusters hscA 1396587 - 1394725 - | chaperone protein HscA TERM 1677 1394979 - 1394991 + g 72 -6.3 -4.24422 | GGGCTTCGAGTTCCC GTTGA GCT TCAAC TTTGGTTTCTTGTAA hscB 1397136 - 1396621 - | co-chaperone protein (Hsc20), believed to be involved in assembly of Fe-S clusters TERM 1678 1397199 - 1397163 - R 100 -16.3 -3.53031 | opp_overlap 1397174, overlap 1397167 1397174 TCCATCGTAAATTAA TAAATTAAAAACAGTGA AGA TCACTGTTTTTAATTCA GAAGAAGGGAGGATA TERM 1679 1397195 - 1397167 - R 100 -14.9 -4.39696 | opp_overlap 1397174, overlap 1397163 1397174 TCGTAAATTAATAAA TTAAAAACAGTGA AGA TCACTGTTTTTAA TTCAGAAGAAGGGAG TERM 1680 1397188 - 1397174 - R 95 -8.6 -5.09521 | opp_overlap 1397174, overlap 1397167 1397163 TTAATAAATTAAAAA CAGTGA AGA TCACTG TTTTTAATTCAGAAG TERM 1681 1397174 - 1397188 + r 95 -8.6 -4.8622 | opp_overlap 1397174 1397167 1397163 TTAATAAATTAAAAA CAGTGA AGA TCACTG TTTTTAATTCAGAAG TERM 1682 1397242 - 1397226 - R 70 -7.3 -3.77206 | GATAATTTGATTAAA CGGTAAA TGA TTCACCG CAACCACATTCACCT iscA 1397541 - 1397221 - | iron-binding protein, putative regulator believed to be involved in Fe-S protein formation or repair iscU 1397953 - 1397567 - | scaffold protein iscS 1399242 - 1398025 - | cysteine desulfurase used in synthesis of Fe-S cluster (tRNA 4-thiouridine sulfurtransferase ) TERM 1683 1398534 - 1398549 + g 73 -9 -3.43919 | overlap 1398532 AGCGCATACCACGTT CATGGC CACC GCCATG TATTTGAGCTTTCAA iscR 1399687 - 1399244 - | repressor of the iscRSUA operon, involved in assembly of Fe-S clusters TERM 1684 1399762 - 1399780 + r 83 -6 -5.19212 | opp_overlap 1399762 1399761, overlap 1399764 GAGAATTTTATGAAT CCTGACTA AAA TAGTCAAG TTTTTTAATGATAAT ACIAD1406 1400480 - 1399827 - | hypothetical protein TERM 1685 1400952 - 1400936 - g 75 -5.1 -4.78661 | overlap 1400939 ACTGAAAAAGCAAAA GAATCTG TTA CAGATAC CAAGGATAAGGTCGA TERM 1686 1400949 - 1400939 - g 70 -5.4 -4.47007 | overlap 1400936 GAAAAAGCAAAAGAA TCTG TTA CAGA TACCAAGGATAAGGT ACIAD1407 1400621 - 1401133 + | putative poly(hydroxyalcanoate) granule associated protein hupB 1401297 - 1401569 + | DNA-binding protein HU-beta TERM 1687 1401605 - 1401588 - f 80 -10.5 -3.10556 | opp_overlap 1401588, overlap 1401586 TTTAAAATAAGTAGA CGCGCCA TTTT CGGCGCG TTTTTTATTAAAAAG TERM 1688 1401588 - 1401605 + F 100 -9.8 -5.4505 | opp_overlap 1401586 1401588 TTTAAAATAAGTAGA CGCGCC ATTTTC GGCGCG TTTTTTATTAAAAAG TERM 1689 1402059 - 1402043 - g 72 -6.5 -4.35524 | opp_overlap 1402047 1402047, overlap 1402045 TGCGCAAATTGAAAA GATGCTG GCT CAGCAGC CAAGTTTCCAAGAAA TERM 1690 1402057 - 1402045 - g 72 -7.7 -3.78026 | opp_overlap 1402047 1402047, overlap 1402043 CGCAAATTGAAAAGA TGCTG GCT CAGCA GCCAAGTTTCCAAGA TERM 1691 1402316 - 1402304 - g 93 -2.7 -5.9873 | TGATTATAAAAAAAA TATCA ATG TGACA AATCAAGAAATTGCT ppiD 1401702 - 1403570 + | peptidyl-prolyl cis-trans isomerase precursor (PPIase) (rotamase) TERM 1692 1403615 - 1403586 - T 82 -10.1 -3.57144 | opp_overlap 1403581 1403593, overlap 1403593 TCTTTGACTTTGAAA TAAAAAAGCGCCA TATT CGGCGCTTTTTTT ATCATGATTGCTGGC TERM 1693 1403608 - 1403593 - T 93 -8.2 -5.63517 | opp_overlap 1403593 1403581, overlap 1403586 CTTTGAAATAAAAAA GCGCCA TATT CGGCGC TTTTTTTATCATGAT TERM 1694 1403593 - 1403608 + T 93 -7.5 -5.67967 | opp_overlap 1403586 1403593, overlap 1403581 CTTTGAAATAAAAAA GCGCC ATATTC GGCGC TTTTTTTATCATGAT alkR 1404537 - 1403617 - | XylS/AraC family transcriptional regulator alkM 1404733 - 1405959 + | terminal alkane-1-monooxygenase TERM 1695 1405972 - 1406002 + T 79 -9.9 -3.17571 | opp_overlap 1405978, overlap 1405978 TAATCAGACCTTATT TTAAAAGAGAGTC TAAGT GACTCTCTTTTTA TTAGATTAAGCCATT TERM 1696 1405978 - 1405996 + T 95 -8.9 -5.13741 | opp_overlap 1405978, overlap 1405972 GACCTTATTTTAAAA GAGAGTC TAAGT GACTCTC TTTTTATTAGATTAA TERM 1697 1405996 - 1405978 - T 85 -8.9 -4.14243 | opp_overlap 1405978 1405972 GACCTTATTTTAAAA GAGAGTC TAAGT GACTCTC TTTTTATTAGATTAA ACIAD1412 1407221 - 1406016 - | putative acyl-CoA dehydrogenase ACIAD1413 1408557 - 1407253 - | putative acyl-CoA dehydrogenase TERM 1698 1408722 - 1408761 + r 72 -5 -4.65263 | opp_overlap 1408726, overlap 1408722 AAAATAAGATTTGGA TGAATTGACCAGAATGAC AGAT GGCATTCTGGTCAAACAA TTTATTTTACAAAAT TERM 1699 1408722 - 1408760 + r 72 -8.3 -3.38435 | gap 1, opp_overlap 1408726, overlap 1408722 AAAATAAGATTTGGA TGAATTGACCAGAATGAC AGAT GGCATTCTGGTCAAA-CA ATTTATTTTACAAAA TERM 1700 1408757 - 1408726 - R 95 -14.6 -3.16668 | opp_overlap 1408722 1408722 TAAGATTTGGATGAA TTGACCAGAATGAC AGAT GGCATTCTGGTCAA ACAATTTATTTTACA ACIAD1414 1410163 - 1408763 - | hypothetical protein TERM 1701 1409768 - 1409785 + g 70 -9.9 -2.5474 | opp_overlap 1409766, overlap 1409767 1409770 AATAATCAGATCATC CAGCTTG CTGC CAAGCTG CTCTTGTAAGTGAGC ACIAD1415 1410741 - 1410433 - | hypothetical protein TERM 1702 1411125 - 1411141 + G 73 -5.9 -4.56367 | GTCGATGCGCCGTTA TTTGCTA TGC TGGCAAA TTTCTTTCTGGGGTG ACIAD1416 1410909 - 1411265 + | hypothetical protein arcD 1412692 - 1411352 - | arginine/ornithine antiporter ACIAD1418 1413576 - 1412698 - | putative homocysteine S-methyltransferase family protein ACIAD1419 1415086 - 1413752 - | dihydroorotase TERM 1703 1414996 - 1415009 + g 71 -4.5 -4.72272 | TTGAAGATTGTATTT TGGCG ATCC TGCCA TTTTTAATCAGCACA ACIAD1420 1415651 - 1415091 - | putative carbonate dehydratase TERM 1704 1415757 - 1415720 - R 70 -7.3 -3.89085 | opp_overlap 1415704 1415727, overlap 1415704 1415722 1415725 1415727 AGAATTAAAAATTAA TACTATATTTGTTATGT TATA ACATAACAAATATGCTA AACAAGTATTAAAAC TERM 1705 1415754 - 1415722 - R 75 -8.8 -3.51015 | gap 1, opp_overlap 1415704 1415727, overlap 1415704 1415720 1415725 1415727 AATTAAAAATTAATA CTATATTTGTTATGT TATA ACATAACAAATAT-G CTAAACAAGTATTAA TERM 1706 1415752 - 1415725 - R 83 -11.6 -2.8719 | opp_overlap 1415727, overlap 1415722 1415720 1415727 TAAAAATTAATACTA TATTTGTTATGT TATA ACATAACAAATA TGCTAAACAAGTATT TERM 1707 1415750 - 1415727 - R 77 -9.8 -2.9648 | opp_overlap 1415727, overlap 1415725 1415722 1415720 AAAATTAATACTATA TTTGTTATGT TATA ACATAACAAA TATGCTAAACAAGTA TERM 1708 1415727 - 1415750 + r 76 -9.8 -2.78596 | opp_overlap 1415727 1415725 1415722 1415720 AAAATTAATACTATA TTTGTTATGT TATA ACATAACAAA TATGCTAAACAAGTA ACIAD1421 1417133 - 1415826 - | putative histidine kinase of 2-component regulatory system ACIAD1422 1417884 - 1417204 - | putative 2-component regulatory protein eptA 1419538 - 1417886 - | lipid A phosphoethanolamine transferase, associated with polymyxin resistance salA 1419854 - 1421125 + | salicylate 1-monooxygenase salR 1421250 - 1422140 + | LysR family transcriptional regulator salE 1422891 - 1422172 - | salicylate esterase ACIAD1427 1424088 - 1422922 - | putative fatty acid and hydrocarbon transporter (SalD) TERM 1709 1424107 - 1424121 + r 88 -7.2 -5.05113 | opp_overlap 1424107 CCTTGTATTGAATAA GTCAAA CCA TTTGAC TTTTATTTATCTAAA TERM 1710 1424230 - 1424277 + r 83 -11 -3.03899 | gap 1, opp_overlap 1424238 1424245, overlap 1424245 GATATAATAATTTTA CAG-GTAAATTAAAAAGGTTCTT ATT AAGAACCTTTTTAATTAAAACTG ATTATTTGGATTTTG TERM 1711 1424268 - 1424238 - R 100 -15.8 -3.71645 | opp_overlap 1424230 1424245, overlap 1424245 AATTTTACAGGTAAA TTAAAAAGGTTCTT ATT AAGAACCTTTTTAA TTAAAACTGATTATT TERM 1712 1424261 - 1424245 - R 100 -9.5 -5.00138 | opp_overlap 1424245 1424230, overlap 1424238 CAGGTAAATTAAAAA GGTTCTT ATT AAGAACC TTTTTAATTAAAACT TERM 1713 1424245 - 1424261 + r 100 -9.5 -4.86621 | opp_overlap 1424238 1424245, overlap 1424230 CAGGTAAATTAAAAA GGTTCTT ATT AAGAACC TTTTTAATTAAAACT areA 1425259 - 1424279 - | esterase for aryl ester catabolic pathway TERM 1714 1425302 - 1425339 + r 95 -14.5 -2.73123 | opp_overlap 1425309, overlap 1425309 TGATTTATTTACGAT TTGAGAAGTTATGTATT GTTC AAGACATAACTTCTCAA TGCTTAACCAATTTT areB 1426458 - 1425343 - | aryl-alcohol dehydrogenase TERM 1715 1426215 - 1426183 - G 79 -7.7 -4.38154 | ACAGCTTCCACAAAA GCCATAGCTGAGCAC CAC GTGATCACCTACAGC CAAATCTTTGACATT areC 1428006 - 1426486 - | benzaldehyde dehydrogenase II TERM 1716 1427122 - 1427110 - G 71 -4.1 -4.78149 | opp_overlap 1427110, overlap 1427102 CCCAGAATGCAAAAA TGCAC CCC ATGCA ATATTCTCGGCTGCT TERM 1717 1428138 - 1428176 + r 95 -14.8 -2.92513 | opp_overlap 1428141, overlap 1428141 GGGCTGGACACTATT GAATTGTACATTGTCCAG AAT CTGAACAATGTACAATAC TGTCCTTGAGCTTAT TERM 1718 1428141 - 1428173 + r 100 -15.1 -2.70143 | opp_overlap 1428141, overlap 1428138 CTGGACACTATTGAA TTGTACATTGTCCAG AAT CTGAACAATGTACAA TACTGTCCTTGAGCT TERM 1719 1428173 - 1428141 - R 100 -17.3 -3.11634 | opp_overlap 1428141 1428138 CTGGACACTATTGAA TTGTACATTGTCCAG AAT CTGAACAATGTACAA TACTGTCCTTGAGCT areR 1429993 - 1428191 - | sigma(54)-dependent transcriptionnal regulator for areCBA operon TERM 1720 1428815 - 1428802 - G 82 -4.5 -5.2853 | CATCTAAAAACAAAA TGCCC TGAT GAGCA AGTTCGATCAAACCA TERM 1721 1429369 - 1429385 + g 70 -3.7 -4.75967 | opp_overlap 1429364 GAAAATAAAGCAGCT TATGCTG TGC TGGCATA TTCTTTTTTATAATT TERM 1722 1431463 - 1431478 + G 76 -7.6 -4.08216 | opp_overlap 1431462 1431463, overlap 1431477 ATATCCCGTATAAAG TCCGTT ATGG AACGGA TTTTAACGAAAATCG ACIAD1433 1430277 - 1431524 + | putative porin for benzoate transport (BenP) benK 1431562 - 1432962 + | MFS family benzoate membrane transporter TERM 1723 1432981 - 1433007 + T 93 -7.4 -5.45652 | gap 1, opp_overlap 1432981 AAAAAATTATAAAAA CCCATCAGCAC CTCACA GT-CTGATGGG TTTTTTGTTACCAGT TERM 1724 1433007 - 1432981 - T 90 -8.1 -5.14894 | gap 1, opp_overlap 1432981 AAAAAATTATAAAAA CCCATCAGCACC TCAC AGT-CTGATGGG TTTTTTGTTACCAGT benR 1433929 - 1433015 - | benzoate degradation transcriptional regulator benA 1434223 - 1435608 + | benzoate 1,2-dioxygenase alpha subunit benB 1435605 - 1436114 + | benzoate 1,2-dioxygenase beta subunit TERM 1725 1436125 - 1436152 + F 77 -10 -3.01869 | overlap 1436124 TTTAAATCAGTTATA CCTCAGTCAA ACGGACAC TTGACTGAGG GTTTATGAGTTTATA TERM 1726 1436840 - 1436858 + G 86 -6.6 -4.91459 | GCTCATGCTGGCTGG CGGTACGG GAA TCGCACCG TTTTTATCGATGTTG benC 1436187 - 1437203 + | benzoate 1,2-dioxygenase ferredoxin reductase subunit benD 1437222 - 1438007 + | 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase TERM 1727 1438441 - 1438460 + G 81 -7.1 -4.6971 | ACCGCAGGGAATTGC TGCTGGC ATGATG GCCGGCA TTTTATTCCAGTTTG TERM 1728 1438944 - 1438954 + G 71 -4 -4.89567 | overlap 1438932 ATATTGCTGGAATAG CAAA TGG TTTG TTTTATGTTTTAGGA TERM 1729 1439089 - 1439079 - g 70 -5.4 -4.46404 | overlap 1439067 CAAGCAATATTAAAA TTGC CAT GCAA GAAGATCAGCAACGA benE 1438034 - 1439233 + | MFS family benzoate membrane transporter TERM 1730 1439275 - 1439295 + F 100 -9.1 -5.42198 | opp_overlap 1439275 ATTATTTCTATCATA TTCGCTTTA TTC TAAGGCGAA TTTTGTTTTTTAAGA TERM 1731 1439483 - 1439523 + F 72 -2.9 -5.24291 | opp_overlap 1439491, overlap 1439484 1439486 1439491 TGAGCTAAATTTACT TTTTAAAATTTAAATATAT TAT ATATATTTGAATTTTATTG TTTTATTTTAATTTT TERM 1732 1439486 - 1439520 + F 100 -11.2 -4.64486 | opp_overlap 1439491, overlap 1439484 1439483 1439491 GCTAAATTTACTTTT TAAAATTTAAATATAT TAT ATATATTTGAATTTTA TTGTTTTATTTTAAT TERM 1733 1439491 - 1439515 + F 84 -6.7 -5.14949 | opp_overlap 1439491, overlap 1439484 1439486 1439483 ATTTACTTTTTAAAA TTTAAATATAT TAT ATATATTTGAA TTTTATTGTTTTATT TERM 1734 1439619 - 1439606 - f 74 -3.1 -5.23316 | overlap 1439598 TAGTATACCAAAAAA GCATG AAAA CATAC TCTCTTAGGAATTGG catA 1439848 - 1440783 + | catechol 1,2-dioxygenase TERM 1735 1440836 - 1440807 - gf 74 -9.3 -3.08776 | opp_overlap 1440808, overlap 1440804 AATGGTTCAAAATTA TCAGGCGAGTGAT CATG ATCACTGGCCTGT TTTTATTTCAGGGAA TERM 1736 1440808 - 1440835 + GF 100 -12.8 -5.27335 | opp_overlap 1440807 1440804 ATGGTTCAAAATTAT CAGGCGAGTGAT CATG ATCACTGGCCTG TTTTTATTTCAGGGA TERM 1737 1441191 - 1441204 + GF 71 -3.1 -4.91712 | gap 1, opp_overlap 1441180 1441191 AGCAGTCTGGACACA GGCAGA TAT TC-GCC TTTTTGTGCATTCAG ACIAD1443 1440793 - 1442127 + | hypothetical protein TERM 1738 1442936 - 1442922 - gT 76 -2.8 -5.27335 | overlap 1442923 CGTGCGAAAGAAAAA CTGCAC AGT ATGCAA GTGGATGTGAGTTTA TERM 1739 1443604 - 1443586 - gT 78 -10.4 -2.62439 | opp_overlap 1443590, overlap 1443585 1443583 AACATGTTCAAACAC TCGATGAA ACC TTCATCGA TTACAGCGCAGCACT ACIAD1444 1442076 - 1443653 + | hypothetical protein catR 1444591 - 1443680 - | transcription regulator LysR TERM 1740 1445508 - 1445498 - g 86 -6.8 -5.055 | opp_overlap 1445496 1445498 CGAATTGCCAAAAAA TCGG GTG CCGA TGTGTTTGCAGTAAA catB 1444715 - 1445827 + | muconate cycloisomerase I (cis,cis-muconate lactonizing enzyme I) (MLE) catC 1445845 - 1446135 + | muconolactone delta-isomerase (MIase) catI 1446225 - 1446911 + | 3-oxoadipate CoA-transferase subunit A (Beta-ketoadipate:succinyl-CoA transferase subunit A) catJ 1446922 - 1447575 + | 3-oxoadipate CoA-transferase subunit B (Beta-ketoadipate:succinyl-CoA transferase subunit B) TERM 1741 1448219 - 1448197 - g 79 -8.5 -4.09685 | overlap 1448201 GGCTACTTTGCAAAA GAAATCGTG CCTGT CACGATTCC ACAGCGCAAAGGAGA TERM 1742 1448215 - 1448201 - g 75 -5.7 -4.65263 | overlap 1448197 ACTTTGCAAAAGAAA TCGTG CCTGT CACGA TTCCACAGCGCAAAG catF 1447588 - 1448793 + | beta-ketoadipyl CoA thiolase catD 1448803 - 1449606 + | 3-oxoadipate enol-lactonase II (Beta-ketoadipate enol-lactone hydrolase II) TERM 1743 1449661 - 1449684 + F 100 -10.2 -5.76633 | opp_overlap 1449661 TATGAATTTTCAAAA CGCCACGCGT TCAT GCACGTGGCG TTTTTTTGTATATAG TERM 1744 1449684 - 1449661 - f 100 -11.7 -4.15106 | opp_overlap 1449661 TATGAATTTTCAAAA CGCCACGCG TTCATG CACGTGGCG TTTTTTTGTATATAG ACIAD1452 1449889 - 1451232 + | putative aminotransferase TERM 1745 1451251 - 1451270 + T 100 -10.8 -5.67063 | TCAGCTAATCTTTAA GCCTTATC ACTC GATAAGGC TTTTTTTATCCTGCC ACIAD1453 1451692 - 1451276 - | hypothetical protein ACIAD1454 1451791 - 1452804 + | putative Zn-dependent oxidoreductase TERM 1746 1452823 - 1452855 + T 73 -8.5 -3.24032 | gap 1, opp_overlap 1452823 1452825, overlap 1452821 1452825 1452825 GAATCAATCAACAAA TAGCTGGAAC-CGC TTAATT GCGTGTTCCGGCTG TATTAGTTACGCCAT TERM 1747 1452825 - 1452853 + T 73 -8.9 -3.18366 | gap 1, opp_overlap 1452823 1452825, overlap 1452825 1452823 1452821 ATCAATCAACAAATA GCTGGAAC-CGC TTAATT GCGTGTTCCGGC TGTATTAGTTACGCC ACIAD1455 1453892 - 1452858 - | AraC family transcriptional regulator TERM 1748 1454015 - 1453989 - R 87 -6.5 -5.46698 | GCTAAAATTAAAAAA CCTGCGCCGGA ATGGA TCAAGCACAGG TTAAAACATAACTCA ACIAD1456 1455352 - 1454042 - | hypothetical protein ACIAD1457 1456437 - 1455427 - | putative homoserine kinase type II TERM 1749 1456526 - 1456509 - H 83 -2.1 -5.86976 | gap 1 TTATAAAAGAAAAAA TGAA-TCA ACT TGACTTCA AATGACCTTGCTCAC ACIAD1458 1456611 - 1458035 + | putative transport protein TERM 1750 1458059 - 1458082 + F 100 -9.6 -5.77988 | opp_overlap 1458058 1458059 AAGTGAAACCCAAAG GCATGGTATC TACT GATTCCATGC TTTTTTTATATCTGT TERM 1751 1458082 - 1458059 - f 76 -9.6 -2.91465 | opp_overlap 1458059, overlap 1458058 AAGTGAAACCCAAAG GCATGGTATC TACT GATTCCATGC TTTTTTTATATCTGT TERM 1752 1458188 - 1458198 + G 82 -8.2 -4.36063 | GCATAAATTGGGTGT GGCC TTT GGCC TTTTGGTGATCTTGT ACIAD1459 1458132 - 1458605 + | hypothetical protein ACIAD1460 1458618 - 1460753 + | putative ferrichrome-iron receptor protein ACIAD1461 1461711 - 1460803 - | hypothetical protein ACIAD1462 1462867 - 1462118 - | GntR family transcriptional regulator TERM 1753 1462978 - 1462964 - H 72 -2.8 -5.24003 | AATAAAAATTAAAAA CACGAT CTG ATTGTG ATTGGGCAAATCATC TERM 1754 1463133 - 1463156 + H 72 -6 -4.37506 | gap 1, overlap 1463125 1463129 1463133 1463134 TGCTCTACAGCGGAA GC-TGTTCCTC TTA GGGGGACAGGC TTTGTATTTGATCAT TERM 1755 1463134 - 1463154 + H 75 -9.7 -2.52128 | overlap 1463125 1463129 1463133 1463133 GCTCTACAGCGGAAG CTGTTCCTC TTA GGGGGACAG GCTTTGTATTTGATC TERM 1756 1463219 - 1463262 + H 72 -2.6 -5.24531 | gap 1 GTGTACTCAAATTCC CCTTTGAATGAATAGCAAAAA AGC TTTCACCTATTC-TTCAGAGG TTTTTTATGAAAAAT TERM 1757 1464041 - 1464030 - g 85 -4.4 -5.45813 | opp_overlap 1464038, overlap 1464036 1464038 TATTAAAAAAGAAAA TCCA AATA TGGA TGATCCATTGCTTGC ACIAD1463 1463269 - 1464255 + | binding protein ABC transporter periplasmic substrate-binding protein TERM 1758 1464977 - 1464997 + G 77 -11.1 -2.87581 | overlap 1464974 CATTGTTATGGGTGC GCGACCAGG ACG CGTGGTCGC TGATATTTCGATTGA ACIAD1464 1464282 - 1465124 + | ABC transporter ATP-binding protein ACIAD1465 1465117 - 1465911 + | ABC transporter permease TERM 1759 1467327 - 1467309 - g 75 -2.4 -5.41143 | GAGGCCGTAAAAAAA TTGCAACA ACG TGCTGAAA AAATGGCATTAGCAT ACIAD1467 1465908 - 1467347 + | amidohydrolase TERM 1760 1467551 - 1467529 - T 73 -7.2 -3.93038 | CATTTTAAGACGAAA TTTGATTATT TTG AATAACCAAA CTTGACCAATTCATC ACIAD1468 1467686 - 1467534 - | hypothetical protein TERM 1761 1467601 - 1467570 - G 83 -11.8 -2.83409 | opp_overlap 1467575, overlap 1467575 GACCAATTCATCAGA CAAAAGCCCTAATC TTTC AATTAGGGCTTTTA AAATTTTGGAGTGAA TERM 1762 1467596 - 1467575 - G 95 -9.5 -4.57755 | opp_overlap 1467575, overlap 1467570 ATTCATCAGACAAAA GCCCTAATC TTTC AATTAGGGC TTTTAAAATTTTGGA TERM 1763 1467575 - 1467596 + g 86 -8.8 -4.28049 | opp_overlap 1467570 1467575 ATTCATCAGACAAAA GCCCTAAT CTTTCA ATTAGGGC TTTTAAAATTTTGGA TERM 1764 1467738 - 1467754 + H 70 -3.7 -4.8622 | GCAATGATTTTATTA CGCAGAA ATT TTTTGTG TTTTTAGTTAAAGGA ACIAD1469 1468041 - 1468496 + | putative RNA polymerase sigma factor (iron regulated) TERM 1765 1469053 - 1469023 - g 71 -4.1 -4.78848 | gap 1, overlap 1469026 TTGCCAAAGATAAAA CCA-GACCGTTTTT GGTC AAAACCAGTCATGG GCAAATTCAGGCACT ACIAD1471 1468497 - 1469513 + | putative transmembrane sensor protein (iron transport) ACIAD1472 1469653 - 1472826 + | putative receptor protein TERM 1766 1473419 - 1473403 - g 78 -9.3 -3.57561 | GGTGAATGGTGGAAA GCGGGCG ACA CGCCGGC AAGCGCGAGCCATAC ACIAD1473 1473019 - 1473810 + | signal peptide TERM 1767 1473849 - 1473816 - f 75 -9.7 -2.7339 | opp_overlap 1473817 1473822, overlap 1473822 TAAAAATTAATGAAT GCAAAAGGAATCTAC ATAT GTAGGTTCCTTTTGT TTTTTGGGCTTTTGC TERM 1768 1473817 - 1473848 + F 100 -15.4 -5.15117 | opp_overlap 1473816 1473822, overlap 1473822 AAAAATTAATGAATG CAAAAGGAATCTAC ATAT GTAGGTTCCTTTTG TTTTTTGGGCTTTTG TERM 1769 1473843 - 1473822 - f 78 -7.3 -4.32201 | opp_overlap 1473817 1473822, overlap 1473816 TTAATGAATGCAAAA GGAATCTAC ATAT GTAGGTTCC TTTTGTTTTTTGGGC TERM 1770 1473822 - 1473843 + F 100 -9.5 -5.42198 | opp_overlap 1473822 1473816, overlap 1473817 TTAATGAATGCAAAA GGAATCTAC ATAT GTAGGTTCC TTTTGTTTTTTGGGC TERM 1771 1474142 - 1474160 + G 93 -8.8 -4.42464 | opp_overlap 1474142 1474144, overlap 1474144 GCAGTCATGCAAAAA CAGTGGCT CAA AGCCACGG TTTATTTAGAACATT TERM 1772 1474160 - 1474142 - g 100 -8.8 -4.67353 | opp_overlap 1474142 1474144, overlap 1474144 GCAGTCATGCAAAAA CAGTGGCT CAA AGCCACGG TTTATTTAGAACATT TERM 1773 1474144 - 1474158 + G 70 -10 -2.54371 | opp_overlap 1474144 1474142, overlap 1474142 AGTCATGCAAAAACA GTGGCT CAA AGCCAC GGTTTATTTAGAACA TERM 1774 1474158 - 1474144 - g 86 -10 -3.95214 | opp_overlap 1474142 1474144, overlap 1474142 AGTCATGCAAAAACA GTGGCT CAA AGCCAC GGTTTATTTAGAACA ACIAD1474 1473869 - 1475380 + | putative peptide signal ACIAD1477 1475520 - 1476311 + | putative TonB-like protein TERM 1775 1476735 - 1476750 + G 71 -4 -4.84017 | TTTTATTTAAAGAAG CTCAAA AGCA TTTGGG TTTTTCTGAAACGTT hemO 1476344 - 1476943 + | heme oxygenase ACIAD1479 1476972 - 1477415 + | hypothetical protein TERM 1776 1477618 - 1477639 + F 73 -7.5 -3.7282 | TATAAGGCGTATTAT GTTAATTTT AGAA AAAATTAAC TTGTTAATACGATAG ACIAD1480 1477677 - 1478666 + | hypothetical protein TERM 1777 1478834 - 1478865 + T 88 -13.2 -3.08032 | opp_overlap 1478839, overlap 1478839 AGATAAGACCTATAA AAAAAGTCCTCATC TTTC GATGAGGACTTTTA TAATTTTGGAGCGGG TERM 1778 1478839 - 1478860 + T 100 -13.1 -4.67635 | opp_overlap 1478839, overlap 1478834 AGACCTATAAAAAAA GTCCTCATC TTTC GATGAGGAC TTTTATAATTTTGGA TERM 1779 1478860 - 1478839 - T 100 -13.1 -5.65177 | opp_overlap 1478834 1478839 AGACCTATAAAAAAA GTCCTCATC TTTC GATGAGGAC TTTTATAATTTTGGA TERM 1780 1478905 - 1478921 + T 72 -9.5 -2.62616 | overlap 1478908 TCGAACTCGCGACCC CAACCTT GGC AAGGTTG TGCTCTACCAACTGA cysS 1480433 - 1479012 - | cysteinyl-tRNA synthetase TERM 1781 1479393 - 1479407 + g 77 -5 -5.02502 | GATATTAAAGCGCTC GATGAA TTG TTCGTC TTTTTGTGTACTGTC kdsD 1480647 - 1481624 + | D-arabinose 5-phosphate isomerase kdsC 1481628 - 1482167 + | 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase TERM 1782 1482639 - 1482621 - g 76 -2.5 -5.40474 | gap 1, overlap 1482625 ATCCTCCGAAAAAAA TGATTGAG ACGA CTCA-TCA AGTCAATGTGGATTC ACIAD1484 1482206 - 1482754 + | hypothetical protein ACIAD1485 1482810 - 1483286 + | hypothetical protein ACIAD1486 1483286 - 1484035 + | ABC transporter ATP-binding protein TERM 1783 1484107 - 1484061 - f 89 -9.1 -4.1552 | gap 1, opp_overlap 1484061 CATTTTTTCAATAAA CCTGACTTATTTTAAT-TAACT TACT AGTTTTATTAAGATAAGTCAGG TTTTTTATTGGAAAA TERM 1784 1484061 - 1484107 + F 100 -11.3 -5.4505 | gap 1, opp_overlap 1484061 CATTTTTTCAATAAA CCTGACTTATTTTAAT-TAACT TACT AGTTTTATTAAGATAAGTCAGG TTTTTTATTGGAAAA ACIAD1487 1484367 - 1485779 + | putative outer membrane efflux protein, type I secretion protein TERM 1785 1486748 - 1486730 - g 75 -2.4 -5.26316 | TTAGCTCAGAAAAAA CTTGCG AAATTGG CACAAG AAGGTATGCGAGAGT ACIAD1488 1485776 - 1487920 + | protein secretion efflux system ABC transporter ATP-binding/membrane protein ACIAD1489 1487917 - 1489107 + | protein secretion efflux system ABC transporter membrane protein TERM 1786 1489111 - 1489146 + F 75 -10.1 -2.62735 | gap 1, opp_overlap 1489111 1489115 1489120, overlap 1489120 AGAGAACGTTAAAAA TAAATAAAATCCTCGA CATGT TCGAGGATTTT-TTTA TCCTCTAAAAAATAT TERM 1787 1489146 - 1489111 - f 100 -10.1 -4.69622 | gap 1, opp_overlap 1489111 1489120, overlap 1489115 1489120 AGAGAACGTTAAAAA TAAATAAAATCCTCGA CATGT TCGAGGATTTT-TTTA TCCTCTAAAAAATAT TERM 1788 1489143 - 1489115 - f 95 -9 -4.88293 | opp_overlap 1489111 1489120, overlap 1489111 1489120 AACGTTAAAAATAAA TAAAATCCTCGA CATGT TCGAGGATTTTT TTATCCTCTAAAAAA TERM 1789 1489120 - 1489138 + F 95 -8.9 -5.69473 | opp_overlap 1489115 1489111 1489120, overlap 1489111 TAAAAATAAATAAAA TCCTCGA CATGT TCGAGGA TTTTTTTATCCTCTA TERM 1790 1489138 - 1489120 - f 95 -8.9 -5.3167 | opp_overlap 1489120 1489111, overlap 1489115 1489111 TAAAAATAAATAAAA TCCTCGA CATGT TCGAGGA TTTTTTTATCCTCTA TERM 1791 1489271 - 1489259 - g 87 -4.7 -5.57054 | opp_overlap 1489259 AAGAAGTTAAAAAAA GCCGG TTT CAGGC GTTTGCTATTCCTGT ACIAD1490 1489207 - 1489806 + | hypothetical protein ACIAD1491 1489853 - 1490410 + | putative acyltransferase TERM 1792 1490407 - 1490443 + T 87 -13.3 -2.80991 | opp_overlap 1490407 1490410 1490414, overlap 1490403 1490414 CATTCGTATGAGAGA TTAGAAAGACCTTGATT TAG AATCAAGATCTTTCTGA TGGATTTATTTGAGT TERM 1793 1490443 - 1490407 - T 87 -13.3 -2.94416 | opp_overlap 1490403 1490407 1490414, overlap 1490410 1490414 CATTCGTATGAGAGA TTAGAAAGACCTTGATT TAG AATCAAGATCTTTCTGA TGGATTTATTTGAGT TERM 1794 1490440 - 1490410 - T 95 -15 -2.71268 | opp_overlap 1490407 1490403 1490414, overlap 1490407 1490414 TCGTATGAGAGATTA GAAAGACCTTGATT TAG AATCAAGATCTTTC TGATGGATTTATTTG TERM 1795 1490414 - 1490436 + T 76 -7.8 -4.00476 | opp_overlap 1490414 1490410 1490407, overlap 1490407 1490403 ATGAGAGATTAGAAA GACCTTGATT TAG AATCAAGATC TTTCTGATGGATTTA TERM 1796 1490436 - 1490414 - T 87 -10 -4.04719 | opp_overlap 1490407 1490403 1490414, overlap 1490410 1490407 ATGAGAGATTAGAAA GACCTTGATT TAG AATCAAGATC TTTCTGATGGATTTA ACIAD1492 1491470 - 1490463 - | hypothetical protein ACIAD1493 1491809 - 1492651 + | putative universal stress protein TERM 1797 1492688 - 1492658 - T 93 -8.4 -5.63645 | opp_overlap 1492661, overlap 1492659 GCAAAATAGAAAAAA CTAGTTATCCGCAA ATG TTGTGGATAACTAT ATGGAAAAGCATGAA TERM 1798 1492687 - 1492659 - T 95 -11.9 -3.95747 | opp_overlap 1492661, overlap 1492658 CAAAATAGAAAAAAC TAGTTATCCGCAA ATG TTGTGGATAACTA TATGGAAAAGCATGA TERM 1799 1492661 - 1492685 + T 86 -12.3 -2.87211 | opp_overlap 1492659 1492658 AAATAGAAAAAACTA GTTATCCGCAA ATG TTGTGGATAAC TATATGGAAAAGCAT TERM 1800 1492729 - 1492764 + T 77 -8.6 -3.57263 | opp_overlap 1492746 1492760, overlap 1492724 1492731 AGGTATTTGTTTTTT AAGTGTTTAAAAGTTA AGTT TAATTTTTAAACACTA TTTCACAATCGCAAT TERM 1801 1492731 - 1492762 + T 89 -11.2 -3.36515 | opp_overlap 1492746 1492760, overlap 1492724 1492729 GTATTTGTTTTTTAA GTGTTTAAAAGTTA AGTT TAATTTTTAAACAC TATTTCACAATCGCA ACIAD1495 1493430 - 1492762 - | putative O-methyltransferase protein TERM 1802 1493525 - 1493514 - R 71 -3 -5.05577 | AAACGAAAGGAAAAA GTTT TTAA AAAC AAATAAAGTATCGAC ACIAD1496 1494306 - 1493584 - | hypothetical protein TERM 1803 1494425 - 1494408 - R 100 -9.9 -5.75599 | opp_overlap 1494408 TAAAGTATAAAAAAA GATCAGC TAAT GCTGATC TTTTAAATTACTTCT TERM 1804 1494408 - 1494425 + r 100 -9.9 -4.32804 | opp_overlap 1494408 TAAAGTATAAAAAAA GATCAGC TAAT GCTGATC TTTTAAATTACTTCT fdxA 1494756 - 1494433 - | 7-Fe ferredoxin TERM 1805 1494980 - 1494957 - R 76 -3.9 -5.24551 | opp_overlap 1494957 CTAAACCAATAAAAA CATACAGTT AATCTA AACTGGATG TGTTGTAAAAAATGA ACIAD1499 1495530 - 1495081 - | hypothetical protein TERM 1806 1495750 - 1495729 - R 88 -7.4 -4.86001 | opp_overlap 1495729 1495732 ACCATTTGATAAAAA TAAGTAGC ACGATG GCTACTTA TAGTTGATGAGAAAA mutS 1498432 - 1495787 - | DNA mismatch repair protein TERM 1807 1498321 - 1498307 - G 73 -2.8 -5.1861 | overlap 1498320 TGCATCATCAAAAAA GAGTTC ATA GAAATC ACCCATGCGATAAAA ACIAD1501 1498660 - 1498866 + | hypothetical protein TERM 1808 1499938 - 1499922 - g 75 -8.7 -3.61398 | opp_overlap 1499922 CTCTCGTGTGAATAA TGGAACG CCA CGTCCCA TTACTGTTCATGAAG ACIAD1503 1499227 - 1500285 + | putative desulfurization enzyme B (dibenzothiophene ) ACIAD1504 1500299 - 1501012 + | hypothetical protein ACIAD1505 1501045 - 1502238 + | putative FMNH(2)-dependent alkanesulfonate monooxygenase (SsuD-like) TERM 1809 1502647 - 1502657 + G 71 -4 -4.78848 | TAAAACCATTTCAGC TGAT GAT ATCA TTTTCTCTTTAAGAC ACIAD1506 1502249 - 1503823 + | peptide ABC transporter periplasmic substrate-binding protein TERM 1810 1504205 - 1504219 + G 72 -7.2 -4.0156 | GTAATACAGTTGCGC TTACGA GTC TCGTAA TTGTTGTTACTGTAC ACIAD1507 1503829 - 1504980 + | peptide ABC transporter membrane protein ACIAD1508 1504977 - 1505825 + | peptide ABC transporter membrane protein ACIAD1509 1505828 - 1507645 + | peptide ABC transporter ATP-binding protein TERM 1811 1508163 - 1508195 + G 71 -4.2 -4.78326 | TAAACGGTAGTAAAT TCTATTCTACGGGT TCTTT ACTTGCAGAATGGA TTTCTTTATTTGCGG ACIAD1510 1507661 - 1508941 + | putative acyl-CoA dehydrogenase, putative desulfurization enzyme C (dibenzothiophene) TERM 1812 1509236 - 1509266 + T 82 -9.9 -3.61421 | opp_overlap 1509242, overlap 1509242 TTGAATGCTAAAAAT AAAAAAGGTTGTC ATCAA GACAACCTTTTTG CTTTTTGTATCGTTA TERM 1813 1509242 - 1509260 + T 95 -8.9 -5.2197 | opp_overlap 1509242, overlap 1509236 GCTAAAAATAAAAAA GGTTGTC ATCAA GACAACC TTTTTGCTTTTTGTA TERM 1814 1509260 - 1509242 - T 100 -8.9 -5.93252 | opp_overlap 1509242 1509236 GCTAAAAATAAAAAA GGTTGTC ATCAA GACAACC TTTTTGCTTTTTGTA ACIAD1512 1510331 - 1509279 - | putative dibenzothiophene desulfurization enzyme B TERM 1815 1510066 - 1510078 + g 71 -3.4 -5.0133 | opp_overlap 1510066 TCCGCCCAAGATAAG CCAA TCACT TTGG TTTTTTGACCAGATG ACIAD1514 1510570 - 1512426 + | ABC transporter ATP-binding protein ACIAD1515 1512423 - 1514255 + | ABC transporter ATP-binding protein TERM 1816 1514300 - 1514329 + F 100 -13.9 -3.86372 | opp_overlap 1514306, overlap 1514303 TATAAACATTTTTTT GAATCATTGTTTA AATT TAAACAATGATTC TTGTGTTTAAATTAA TERM 1817 1514303 - 1514326 + F 87 -9.8 -4.04188 | opp_overlap 1514306, overlap 1514300 AAACATTTTTTTGAA TCATTGTTTA AATT TAAACAATGA TTCTTGTGTTTAAAT ACIAD1516 1514422 - 1516914 + | putative ferric enterobactin receptor protein TERM 1818 1517808 - 1517788 - g 71 -4.7 -4.62475 | ATCCAGAAATTAAAA CAGAAGAAA TTT TTACTCCTG AAGCTGCTCCTTTAG ACIAD1517 1516956 - 1518218 + | putative signal peptide TERM 1819 1518264 - 1518293 + T 76 -3.6 -5.38047 | gap 1 AATTTTTATTAAAAA GCCGCT-CTTCAA AGATA TTGAATTGGCGGC TTTTTTCTATAAATG ACIAD1518 1519398 - 1518310 - | putative sulfonate monooxygenase ACIAD1519 1519714 - 1520790 + | putative sigma-54 dependent transcriptional regulator TERM 1820 1520810 - 1520829 + T 100 -9.4 -5.55698 | opp_overlap 1520810 TTTACATAGAAAAAA CATCCATT TTTT AATGGATG TTTTTTTGCGTTGTG TERM 1821 1520829 - 1520810 - T 100 -9.4 -5.4251 | opp_overlap 1520810 TTTACATAGAAAAAA CATCCATT TTTT AATGGATG TTTTTTTGCGTTGTG tatC 1521566 - 1520820 - | Sec-independent protein secretion pathway, component C TERM 1822 1521050 - 1521032 - G 70 -6 -4.35874 | GAATATAAGTTAAAA CTGGAATT TGA AATGCCAG ACCAAAAGCTAGAAA tatB 1521979 - 1521563 - | Sec-independent protein secretion pathway, component B tatA 1522208 - 1521993 - | Sec-independent protein secretion pathway, translocase protein ACIAD1523 1523060 - 1522305 - | ABC transporter ATP-binding protein ACIAD1524 1523883 - 1523095 - | ABC transporter permease ACIAD1525 1524722 - 1523883 - | ABC transporter permease ACIAD1526 1525799 - 1524726 - | binding protein ABC transporter periplasmic substrate-binding protein TERM 1823 1525229 - 1525247 + g 75 -10.2 -2.85056 | opp_overlap 1525228 1525229, overlap 1525228 TTTTGGCAGATAAAG CCGCAGCC CCA GCCTGCGG ATTTAAATTCACAAT TERM 1824 1525247 - 1525229 - G 76 -10.2 -3.01726 | opp_overlap 1525229 1525228, overlap 1525228 TTTTGGCAGATAAAG CCGCAGCC CCA GCCTGCGG ATTTAAATTCACAAT TERM 1825 1526623 - 1526642 + G 70 -3.6 -4.74706 | overlap 1526636 ATTCGCACCATGCAC CTTTCAAT TTCG ATGGAAAG TTTTTCCATGTTGAA ACIAD1527 1526115 - 1527242 + | putative FMNH2-dependent monooxygenase (methane/alcane sulfonate) TERM 1826 1527282 - 1527257 - f 78 -10.6 -2.75284 | opp_overlap 1527257, overlap 1527253 1527254 1527281 AAAATCATAAACTTA GATCTCTTTG CGATAT CAAAGAGATC TTGTTGTTTGAACAA TERM 1827 1527257 - 1527282 + F 93 -10.6 -4.08557 | opp_overlap 1527253 1527254 1527257 1527281 AAAATCATAAACTTA GATCTCTTTG CGATAT CAAAGAGATC TTGTTGTTTGAACAA TERM 1828 1527475 - 1527489 + G 75 -8.6 -3.86897 | overlap 1527470 CCCCATAAGCGGGCT TTGCTC TTT GAGCAA TTTGTGACAGGTGCA ACIAD1528 1527439 - 1528266 + | putative tonB-like protein ACIAD1529 1528291 - 1529025 + | putative biopolymer transport protein (ExbB-like) ACIAD1530 1529025 - 1529429 + | putative biopolymer transport protein (ExbD-like) TERM 1829 1529478 - 1529433 - T 71 -8.5 -3.02371 | opp_overlap 1529441 1529449, overlap 1529430 1529449 GTGCCTAAATAATTA TGTCTCCATAAAAAAAGCTGC TTCG GCAGCTTTTTTTATATAGTGA GTTTACAGATGAGTA TERM 1830 1529441 - 1529470 + T 100 -15.3 -2.84732 | opp_overlap 1529430 1529433 1529449, overlap 1529449 ATAATTATGTCTCCA TAAAAAAAGCTGC TTCG GCAGCTTTTTTTA TATAGTGAGTTTACA TERM 1831 1529449 - 1529462 + T 93 -8.1 -5.74122 | opp_overlap 1529433 1529449, overlap 1529441 GTCTCCATAAAAAAA GCTGC TTCG GCAGC TTTTTTTATATAGTG TERM 1832 1529462 - 1529449 - T 93 -8.1 -5.60993 | opp_overlap 1529449 1529441, overlap 1529433 GTCTCCATAAAAAAA GCTGC TTCG GCAGC TTTTTTTATATAGTG ACIAD1531 1531077 - 1529494 - | oligopeptide binding protein ABC transporter periplasmic substrate-binding protein OppA ACIAD1532 1531380 - 1531159 - | hypothetical protein TERM 1833 1531243 - 1531227 - GH 77 -4.5 -5.04249 | overlap 1531229 TGTTGAAAAAATAAA CATGAAT AGA ATTCATA AGTAAATAATACAAA TERM 1834 1532530 - 1532508 - gH 80 -4.9 -5.10767 | opp_overlap 1532510, overlap 1532510 TAGTGAAGATAAAAA TAGTGCTAA GCGAT TTAGCACTC AATTAAAAGTCATTA TERM 1835 1532528 - 1532510 - gH 78 -7.5 -4.17211 | opp_overlap 1532510, overlap 1532508 GTGAAGATAAAAATA GTGCTAA GCGAT TTAGCAC TCAATTAAAAGTCAT TERM 1836 1532990 - 1532977 - gH 86 -8.1 -4.61231 | TTATATGCTGAAAAA GGTGG CTTT CCACC GAATGGAGGAGGTGC ACIAD1533 1531363 - 1533975 + | outer membrane receptor protein TERM 1837 1534025 - 1533996 - fH 83 -10.9 -3.14211 | opp_overlap 1534002, overlap 1534002 ACCGTTTCTCATGAA TTTAAAGCCATAC ATAT GTATGGCTTTAAT GTGAATATTAGATAT TERM 1838 1534002 - 1534019 + FH 83 -9.9 -3.8594 | opp_overlap 1533996 1534002 TCTCATGAATTTAAA GCCATAC ATAT GTATGGC TTTAATGTGAATATT TERM 1839 1534019 - 1534002 - fH 83 -9.9 -3.78329 | opp_overlap 1534002, overlap 1533996 TCTCATGAATTTAAA GCCATAC ATAT GTATGGC TTTAATGTGAATATT TERM 1840 1534742 - 1534729 - g 79 -6.7 -4.62069 | GCTTTACGGTAAAAA CACCA CGGC TGGTG CAGTAAATTACATTT TERM 1841 1535435 - 1535424 - g 71 -3 -4.93877 | overlap 1535434 CGCGAGTAAATAAAA CATT ACCG AATG GAGCTCCAGCCCAAA TERM 1842 1535452 - 1535467 + G 73 -8.2 -3.5944 | opp_overlap 1535438 1535434 1535451 1535452, overlap 1535435 AGCTCCAGCCCAAAC GGCGGG AACA CCTGCC TTTAGAGATATCAGT ACIAD1534 1534223 - 1536553 + | putative tonB-dependent receptor protein (outer membrane salicin receptor) ACIAD1535 1536572 - 1537765 + | putative FMNH2-dependent monooxygenase TERM 1843 1537788 - 1537812 + T 75 -7.2 -4.23213 | opp_overlap 1537788 CTCAATCCTATTCAA CCAAGGCTTT GAATA GAAGCTTTGG TTTATTGCGTATGAG citB 1539016 - 1537889 - | citrate utilization protein B ACIAD1537 1540412 - 1539006 - | tricarballylate dehydrogenase TERM 1844 1540535 - 1540549 + r 74 -5.6 -4.67982 | GTGTTTATAAGCTTC GCACTG GGC CAGCGC TTTTCTTGAATCAAG ACIAD1539 1541445 - 1540516 - | LysR family transcriptional regulator TERM 1845 1540607 - 1540587 - G 89 -12.7 -2.79574 | overlap 1540584 CACATGCACGAATCA CCACTTTAG TGG CTAAAGTGG CAGGCGAGAGTTCTT TERM 1846 1541565 - 1541541 - R 82 -7.9 -4.56978 | CGCCGAAAGAATAAA GGCAACATCCT CTC AAAATGCTGCC TTTTAGAGCTTTTAT ACIAD1540 1542371 - 1541577 - | ABC transporter periplasmic substrate-binding protein TERM 1847 1541841 - 1541852 + g 82 -5.8 -5.05228 | overlap 1541837 ACGTTTTGCAACGCG GTCG CCGA CGAC TTTTTCTGCTTTACT TERM 1848 1542431 - 1542398 - R 82 -8.9 -3.93117 | gap 1, opp_overlap 1542400, overlap 1542400 TGAAGGACACAAGAA CACAGCACGG-TTGCA ATA TGCACGCCGTGCTGTT CATTAAAATTTTCAA TERM 1849 1542429 - 1542400 - R 90 -11.5 -3.54548 | gap 1, opp_overlap 1542400, overlap 1542398 AAGGACACAAGAACA CAGCACGG-TTGCA ATA TGCACGCCGTGCTG TTCATTAAAATTTTC TERM 1850 1542400 - 1542429 + r 95 -13.7 -3.40141 | gap 1, opp_overlap 1542400 1542398 AAGGACACAAGAACA CAGCACGGT-TGCA ATA TGCACGCCGTGCTG TTCATTAAAATTTTC TERM 1851 1542453 - 1542472 + r 72 -5.8 -4.3534 | gap 1 AATTTTCAAATGATG CTGACGTGT TAG ACAC-TCAG TTTTGCTGGTTCAAC citA 1543771 - 1542461 - | major facilitator superfamily citrate-proton symporter ACIAD1542 1543853 - 1544005 + | hypothetical protein ACIAD1543 1544969 - 1544040 - | LysR family transcriptional regulator ACIAD1545 1545745 - 1545290 - | hypothetical protein TERM 1852 1545855 - 1545881 + H 85 -8.9 -4.19472 | GCACCTATATTTTCT TATTGAGTTCC TTTTT GGAACTTAATA TTTTGAGATCTATTC ACIAD1547 1545909 - 1546775 + | hypothetical protein ACIAD1548 1546902 - 1547582 + | putative glutathione S-transferase ACIAD1549 1547579 - 1548346 + | putative short chain dehydrogenase TERM 1853 1548403 - 1548390 - g 71 -2.3 -5.11112 | overlap 1548379 AAAGCCCAACAAAAA GTGCA GGGT TGCGC GGTGATCGTGGGCAA ACIAD1550 1548348 - 1549013 + | oxidoreductase TERM 1854 1549326 - 1549342 + F 74 -6.7 -4.44277 | overlap 1549334 GTTCATCATTTTATT TTTTTCA TTC TGAAAAA TTTTAGATTTTCATG ACIAD1551 1549355 - 1549534 + | fragment of transposase ACIAD1552 1549648 - 1549836 + | fragment of transposase ACIAD1553 1549833 - 1550030 + | fragment of transposase ACIAD1554 1550416 - 1551429 + | putative acyl-CoA dehydrogenase-related protein ACIAD1556 1551417 - 1552193 + | hypothetical protein ACIAD1557 1552186 - 1552785 + | putative methyltransferase ACIAD1558 1552782 - 1553426 + | putative glycosyl transferase related protein ACIAD1559 1554184 - 1553921 - | MarR family transcriptional regulator TERM 1855 1554253 - 1554265 + G 75 -3.3 -5.08824 | GTTTAATGGCGAGTG CGGGT GCA ACCAG TTTTTTAGATAACAG ACIAD1560 1554216 - 1554407 + | hypothetical protein ACIAD1561 1554408 - 1555382 + | putative nitrilotriacetate monooxygenase component B (NtaB) TERM 1856 1555415 - 1555451 + F 85 -10.3 -3.35798 | opp_overlap 1555412 1555411 1555415, overlap 1555422 TAAATATAGAATTTA TTTTCACCTCAGGCAAC TGT GTTTTATGAGGTGAAAA TTATAGATAAAGCCT ACIAD1562 1555433 - 1555711 + | fragment of transposase ACIAD1563 1555944 - 1555825 - | fragment of transposase ACIAD1564 1555992 - 1556120 + | fragment of transposase ACIAD1565 1556547 - 1557311 + | putative 3-hydroxyacyl-CoA dehydrogenase (short-chain) TERM 1857 1557704 - 1557726 + G 73 -9.1 -3.42699 | opp_overlap 1557704 1557718 TTTTTTATGACCGAA CCTGCGCAA GAAAA TGGCGCAGG TTCTGATCCATCCAT ACIAD1566 1557308 - 1558501 + | putative acyl-CoA dehydrogenase family protein TERM 1858 1559428 - 1559444 + G 80 -6.5 -4.74801 | TGTCGCATTTAATTT TTTCCGC TTG GCGGCAA TTTTTCATGGCATTA ACIAD1567 1558502 - 1559569 + | putative aminoglycoside phosphotransferase TERM 1859 1559787 - 1559798 + G 85 -5.8 -5.09225 | TACTGAAGCTCAAGC GCAG GTAC CTGC TTTTTTAAGTGAGCT ACIAD1568 1559560 - 1560360 + | putative enoyl-CoA hydratase/isomerase ACIAD1569 1560357 - 1561520 + | acetyl-CoA acetyltransferase ACIAD1570 1561511 - 1562491 + | putative dioxygenase (related to 2-nitropropane dioxygenase) caiD 1562518 - 1563300 + | enoyl-CoA hydratase TERM 1860 1564068 - 1564050 - g 75 -8.2 -3.85092 | opp_overlap 1564042, overlap 1564051 ATGATGCAGAGCAAA CGCTCAAT TTA ATTGAGCA ATATCAGATCAGTCA TERM 1861 1564067 - 1564051 - g 71 -9.5 -2.90573 | opp_overlap 1564042, overlap 1564050 TGATGCAGAGCAAAC GCTCAAT TTA ATTGAGC AATATCAGATCAGTC TERM 1862 1564192 - 1564238 + G 71 -6.8 -4.20932 | TCATGCGGCTGCACC GT-GTCCCGTACCAGTTAAGCA GGCAA TGATTGACTGGTG-GGGACCAC TTTTACATGAATATT ACIAD1572 1563341 - 1564894 + | acyl-CoA synthetase ACIAD1573 1565181 - 1564993 - | hypothetical protein TERM 1863 1565316 - 1565298 - H 100 -7.4 -5.77988 | AGACACATAAAAAAA GGTCAGCA GTT TGCTCACC AAGAAAATATAGAAT ACIAD1574 1565351 - 1566217 + | hypothetical protein TERM 1864 1567112 - 1567101 - g 73 -7.2 -4.23892 | CTGAACTACTTAAAA CGGC AACA GCCG AGATGGTACGTCATG linC 1566242 - 1567483 + | linalool 8-monooxygenase (cytochrome P450 111) (cytochrome P450lin) ACIAD1576 1567494 - 1568339 + | AraC family transcriptional regulator TERM 1865 1569024 - 1569038 + G 71 -10 -2.64218 | opp_overlap 1569011, overlap 1569012 1569023 ATTGCGCCTGCACTA GCAGCA GGC TGCTGC ATTGTACTGAAACCT ACIAD1577 1568499 - 1569962 + | putative aldehyde dehydrogenase ACIAD1578 1569992 - 1571107 + | putative aryl-alcohol dehydrogenase (Benzyl alcohol dehydrogenase) (XylB-like) ACIAD1579 1571127 - 1571441 + | putative ferredoxin (electron transport iron-sulfur protein) ACIAD1580 1571442 - 1572683 + | putative ferredoxin reductase component (dioxygenase) TERM 1866 1572715 - 1572744 + T 100 -9.5 -5.75342 | opp_overlap 1572718 GCATTTACAATTGAT TAAGTTAGAGC ATTAGGCC GCTCTAACTTA TTTTTTTTCGAAACC ACIAD1581 1573359 - 1572742 - | TetR family transcriptional regulator TERM 1867 1573596 - 1573633 + r 79 -10.1 -3.15366 | CCGAAATAGAGGTGA CGTAGAAAAAGATGG CTTTAATA CTGTCTTTTTCTACG TGTTAAGGTTTTAAA ACIAD1582 1575596 - 1573644 - | putative cysteine desulfurase 1 (Csd) TERM 1868 1574293 - 1574305 + gr 72 -6.3 -4.26903 | AATACACGAACTCCT TTGCT ATG AGCAA TTTTAATGACCTCAG TERM 1869 1575491 - 1575480 - GR 83 -5.8 -5.03145 | TAAGGCTGCAAAAAA CTCG CTTG CGAG ACGGGATAGGGTGGC srpI 1576503 - 1575571 - | major membrane protein I (MMP-I) (35 kDa antigen) srpH 1577684 - 1576758 - | serine acetyltransferase ACIAD1585 1578229 - 1577735 - | putative rhodanese-like sulfurtransferase atsB 1578607 - 1580232 + | sulfate ester permease protein atsC 1580242 - 1581057 + | sulfate ester ABC transporter ATP-binding protein ACIAD1588 1581067 - 1581915 + | putative tonB-like protein ACIAD1589 1581952 - 1582686 + | putative biopolymer transport protein (ExbB-like) ACIAD1590 1582686 - 1583093 + | putative biopolymer transport protein (ExbD-like) TERM 1870 1583125 - 1583149 + F 84 -6.6 -5.05079 | gap 1, opp_overlap 1583120 1583125 CAAGACGAAAGAAAA TCAAGATC-CA AATT TGAGATCTTGA TTTTTATATAATTGT TERM 1871 1583149 - 1583125 - f 83 -6.6 -4.99568 | gap 1, opp_overlap 1583125, overlap 1583120 CAAGACGAAAGAAAA TCAAGATC-CA AATT TGAGATCTTGA TTTTTATATAATTGT ACIAD1591 1583250 - 1584047 + | putative transcriptional regulator ACIAD1592 1584167 - 1585075 + | putative alkylsulfatase astR 1585114 - 1586193 + | sulfate ester binding protein TERM 1872 1586716 - 1586733 + G 73 -5.5 -4.72986 | opp_overlap 1586731 GTATTGAAGTCCTTC GTGGTCC GCAA GGAACAC TTTTTGGTAAAAATG TERM 1873 1587064 - 1587054 - g 79 -3.2 -5.252 | TATCTGCATAAAAAA GGAA GTG CTCC GACAGGCATTGTGGT ACIAD1594 1586229 - 1588517 + | putative TonB-dependent receptor protein ntaA 1588572 - 1589909 + | nitrilotriacetate monooxygenase component A (NTA monooxygenase component A) (NTA-MO A) ACIAD1596 1589921 - 1590919 + | putative oxidoreductase ACIAD1597 1593463 - 1590986 - | putative TonB-dependent receptor TERM 1874 1593461 - 1593481 + g 77 -4.7 -5.02323 | opp_overlap 1593461 GTGCTTTTGAACTGA CATTAATGG ACT CCATTTGTG TTTTCTTTGTGATGA TERM 1875 1593635 - 1593652 + r 82 -11.3 -2.56095 | opp_overlap 1593635 GCGGCAAATTTAAAA GCCAGCA TGAG TGCTGGC TGAGTTCAATCTAAA TERM 1876 1593652 - 1593635 - R 100 -11.3 -4.35524 | opp_overlap 1593635 GCGGCAAATTTAAAA GCCAGCA TGAG TGCTGGC TGAGTTCAATCTAAA atsA 1595352 - 1593688 - | arylsulfatase (Aryl-sulfate sulphohydrolase) TERM 1877 1594746 - 1594730 - G 78 -2.1 -5.54264 | overlap 1594733 AAATATGCAAAAAAA GGACGTC CTT GGCGTGC CTCATCATCTTGTAA ACIAD1599 1596291 - 1595470 - | putative transcriptional regulator ACIAD1600 1596513 - 1597466 + | putative alkylsulfatase (AtsK) astR 1597495 - 1598643 + | sulfate ester binding protein ACIAD1602 1599651 - 1598767 - | LysR family transcriptional regulator mmsA 1599821 - 1601329 + | methylmalonate-semialdehyde dehydrogenase, oxidoreductase protein mmsB 1601344 - 1602237 + | 3-hydroxyisobutyrate dehydrogenase TERM 1878 1603463 - 1603483 + G 73 -9.7 -3.04461 | opp_overlap 1603463 1603462 AGCAGGGCAATGAAC TTCCAGCGG ATA CGGCTGGAA TATTGGCCGTCGATA TERM 1879 1603483 - 1603463 - g 71 -9.7 -2.61452 | opp_overlap 1603463, overlap 1603462 AGCAGGGCAATGAAC TTCCAGCGG ATA CGGCTGGAA TATTGGCCGTCGATA ACIAD1606 1602316 - 1603959 + | putative acetyl-CoA synthetase/AMP-(fatty) acid ligase TERM 1880 1603955 - 1603941 - f 73 -8.6 -3.23853 | overlap 1603939 GTTGCGTAATCAAGA GATTGC CAA GCAATC CTAATCAATTCAACC TERM 1881 1603981 - 1603997 + F 72 -5.9 -4.45945 | opp_overlap 1603981 1603982 1603991, overlap 1603982 1603990 CAACCTAAAAAATGA TTGCTTA AAA TAAGCAG TTTTGCTTAATGCAT TERM 1882 1604162 - 1604180 + G 75 -7.4 -4.3898 | overlap 1604158 CAAAAGACGTTTTGT CCCAAATG GGG CAATTGGG TTTTATGGGAATGCT ACIAD1607 1604041 - 1605168 + | putative acyl-CoA dehydrogenase TERM 1883 1605901 - 1605917 + G 73 -5.1 -4.59853 | overlap 1605903 TTTACGTTTTGAGCG CCGAATG TTC CATTCAG TTTTTGCGACCTTAG ACIAD1608 1605221 - 1605994 + | putative enoyl-CoA hydratase/isomerase ACIAD1609 1606007 - 1607035 + | putative enoyl-CoA hydratase/isomerase family protein ACIAD1610 1608150 - 1607107 - | AraC family transcriptional regulator TERM 1884 1608411 - 1608427 + H 83 -5.9 -5.09426 | opp_overlap 1608410 1608411, overlap 1608412 ATTTATGGCTAAAAC TTGCAAT TTA ATTGCAG TTTTTTGAAATTGAA ACIAD1611 1608592 - 1610235 + | putative acetyl-CoA synthetase/AMP-(fatty) acid ligase ACIAD1612 1610288 - 1611469 + | acetyl-CoA acetyltransferase TERM 1885 1611572 - 1611555 - g 72 -9.9 -2.80303 | overlap 1611554 CAAGAAAGAATTAAG CCACTCT CGGC AGAGTGG GATCAAAAACATCAA TERM 1886 1612100 - 1612084 - g 78 -2.1 -5.46657 | opp_overlap 1612091, overlap 1612085 GACTTGAAGAAAAAA TGGGGCA GCA TGCCTCT GACACAGGTCAGATC ACIAD1613 1611486 - 1612613 + | putative acyl-CoA dehydrogenase protein (acdB-like) TERM 1887 1612630 - 1612668 + T 80 -9.1 -3.54543 | overlap 1612632 TATATTGCTTTGTAT TATTCATGCACATTGTA GTTTG TGAAATGTGCATGAATG TTTAAGCGGGTAGAT TERM 1888 1612632 - 1612666 + T 79 -9.5 -3.35046 | overlap 1612630 TATTGCTTTGTATTA TTCATGCACATTGTA GTTTG TGAAATGTGCATGAA TGTTTAAGCGGGTAG ACIAD1614 1613897 - 1612689 - | putative nitrile hydratase activator nthB 1614582 - 1613938 - | nitrile hydratase subunit beta (Nitrilase) (NHase) nthA 1615224 - 1614625 - | nitrile hydratase subunit alpha (Nitrilase) (NHase) amdA 1616823 - 1615309 - | amidase ACIAD1619 1617875 - 1616961 - | hypothetical protein TERM 1889 1617807 - 1617827 + g 95 -3.3 -6.28631 | opp_overlap 1617807 1617809, overlap 1617809 GAGTAAGGCAATCAA CATGATGAC ATA GTTATCATA TTTTTTTTTCATTTG TERM 1890 1617809 - 1617825 + g 78 -5.9 -4.74676 | opp_overlap 1617807 1617809, overlap 1617807 GTAAGGCAATCAACA TGATGAC ATA GTTATCA TATTTTTTTTTCATT TERM 1891 1617872 - 1617888 + g 73 -5.1 -4.61747 | opp_overlap 1617872, overlap 1617875 AACAGTTGGCTAGAA GCACAGT AAA ACTGTAC TTTTGTGATTGTTAG ACIAD1620 1618973 - 1617924 - | putative phenylacetaldoxime dehydratase ACIAD1622 1619391 - 1620350 + | AraC family transcriptional regulator ACIAD1624 1621742 - 1620783 - | transcriptional regulator ACIAD1625 1621989 - 1622762 + | hypothetical protein ACIAD1626 1622958 - 1623527 + | putative outer membrane lipoprotein (lipocalin) TERM 1892 1623570 - 1623536 - f 71 -8.7 -3.09438 | opp_overlap 1623531 1623535, overlap 1623535 1623539 CAAATAAGTATAAAT CGAGTTGAACCGA TTTGATTTT TCGGTTCAACTGG GGCATATGTTATGCT desC 1623653 - 1624624 + | delta 9 acyl-lipid fatty acid desaturase ACIAD1628 1624639 - 1625898 + | putative dehydrogenase TERM 1893 1625953 - 1625963 + G 71 -2.4 -5.08824 | GCCCCAGCCCAAATC CGAC ATC GGCG TTTTTTGCCTAAGGC TERM 1894 1626160 - 1626148 - g 82 -4.8 -5.30575 | GAAAAAGTCAAAAAA GCTG TCTTG CAGC ATGCGAATACGTTTA ACIAD1629 1625911 - 1626699 + | hypothetical protein cfa 1626703 - 1627902 + | cyclopropane-fatty-acyl-phospholipid synthase ACIAD1631 1627936 - 1628715 + | hypothetical protein TERM 1895 1629383 - 1629370 - g 95 -8.1 -5.06052 | TGAAAAAATACAAAA CTGGC TGAA GCCAG AAGGTTTATTATGGT TERM 1896 1629393 - 1629404 + G 71 -3 -5.00884 | AGCCAGAAGGTTTAT TATG GTGT CATA TTTTTTGCCACAGAT ACIAD1632 1628729 - 1629784 + | putative methyltransferase ACIAD1633 1629827 - 1631155 + | putative two-component system sensor protein (ColS-like) ACIAD1634 1631855 - 1631169 - | putative two-component system sensor protein (ColR-like) ACIAD1635 1632375 - 1631875 - | hypothetical protein TERM 1897 1632202 - 1632173 - GR 73 -8.7 -3.29263 | opp_overlap 1632179 1632191, overlap 1632174 1632179 ATATCGTGGGTATAA TGAAAATCAAGAC GGAT GTCCTGATTTTCC CAGGATTTCTCGCAG TERM 1898 1632201 - 1632174 - GR 84 -12.2 -2.57344 | opp_overlap 1632179 1632191, overlap 1632173 1632179 TATCGTGGGTATAAT GAAAATCAAGAC GGAT GTCCTGATTTTC CCAGGATTTCTCGCA TERM 1899 1632196 - 1632179 - GR 76 -6.3 -4.48987 | opp_overlap 1632179 1632191, overlap 1632174 1632173 TGGGTATAATGAAAA TCAAGAC GGAT GTCCTGA TTTTCCCAGGATTTC ACIAD1636 1632920 - 1632348 - | hypothetical protein ACIAD1637 1633558 - 1633010 - | putative antibiotic resistance (phosphinothricin N-acetyltransferase) ACIAD1638 1634188 - 1633616 - | putative transcription regulator protein TERM 1900 1634127 - 1634149 + g 75 -8.4 -3.75665 | overlap 1634129 AGTTCATCTAGCGTA TAGCCTCGCT CCA AGCGAAGCTG TTTAATACGCTGTGA TERM 1901 1634129 - 1634147 + g 73 -8.8 -3.46088 | overlap 1634127 TTCATCTAGCGTATA GCCTCGCT CCA AGCGAAGC TGTTTAATACGCTGT TERM 1902 1634211 - 1634221 + H 80 -2.6 -5.62045 | overlap 1634192 AGAAAGTTTTTTCTA TTAT ACT ATAA TTTTTTCTTCTATAT TERM 1903 1634229 - 1634241 + H 76 -2.7 -5.51165 | TACTATAATTTTTTC TTCTA TAT TGGAA TTTTTTTGAAATTTT TERM 1904 1634807 - 1634842 + H 87 -10.9 -3.36131 | opp_overlap 1634793 1634807, overlap 1634793 1634799 TTATTTTGTTAAAAA TATTTATATGTTTTT TATGTT AAAAACATATAAATA TTATGAAGTGATTTT TERM 1905 1634842 - 1634807 - H 100 -10.9 -4.57569 | opp_overlap 1634793 1634799 1634807, overlap 1634793 TTATTTTGTTAAAAA TATTTATATGTTTTT TATGTT AAAAACATATAAATA TTATGAAGTGATTTT TERM 1906 1635057 - 1635047 - g 78 -2.4 -5.42259 | opp_overlap 1635047 CGACTTTTAAAAAAA CCAC TTT GGGG GTTTATATTTTAGCA TERM 1907 1635188 - 1635245 + G 83 -12.2 -2.80779 | gap 2, opp_overlap 1635188 1635219 CATTAGCGAGTCAAA CTGGC-GCAGTGGCATTGGGTGCAG-GT AGTA ACACTGCAACTAATGCTACAGCTGCTAG TGATGTTACTATTAA ACIAD1639 1635004 - 1637166 + | putative surface protein (partial adhesin) ACIAD1640 1637223 - 1638068 + | putative antigen TERM 1908 1638131 - 1638104 - f 100 -11.4 -4.09628 | opp_overlap 1638105, overlap 1638105 TATGTGAAATAATAA GTCGATGATAGG GTTT CCTATCATCGAT TTTTTTAAATCATTA TERM 1909 1638130 - 1638105 - f 95 -14.9 -3.05054 | opp_overlap 1638105, overlap 1638104 ATGTGAAATAATAAG TCGATGATAGG GTTT CCTATCATCGA TTTTTTTAAATCATT TERM 1910 1638105 - 1638130 + F 100 -14.9 -5.49729 | opp_overlap 1638105 1638104 ATGTGAAATAATAAG TCGATGATAGG GTTT CCTATCATCGA TTTTTTTAAATCATT ACIAD1641 1638305 - 1638538 + | hypothetical protein TERM 1911 1638539 - 1638581 + T 83 -10.1 -3.89346 | gap 1, opp_overlap 1638539 1638542 1638552, overlap 1638552 CTGATCGCAATTTAA GCAGTCTTAAAAAGCTCAGA ATGA TCTGAGCTTTTTCATAC-GC TTTATAGCATAACAA TERM 1912 1638581 - 1638539 - T 79 -10.1 -3.18274 | gap 1, opp_overlap 1638539 1638552, overlap 1638542 1638552 CTGATCGCAATTTAA GCAGTCTTAAAAAGCTCAGA ATGA TCTGAGCTTTTTCATAC-GC TTTATAGCATAACAA TERM 1913 1638579 - 1638542 - T 83 -11.5 -2.78891 | opp_overlap 1638539 1638552, overlap 1638539 1638552 ATCGCAATTTAAGCA GTCTTAAAAAGCTCAGA ATGA TCTGAGCTTTTTCATAC GCTTTATAGCATAAC TERM 1914 1638569 - 1638552 - T 100 -9.9 -4.60889 | opp_overlap 1638539 1638552, overlap 1638542 1638539 AAGCAGTCTTAAAAA GCTCAGA ATGA TCTGAGC TTTTTCATACGCTTT TERM 1915 1638552 - 1638569 + T 100 -9.9 -4.75404 | opp_overlap 1638552 1638542 1638539, overlap 1638539 AAGCAGTCTTAAAAA GCTCAGA ATGA TCTGAGC TTTTTCATACGCTTT uppP 1639383 - 1638583 - | undecaprenyl pyrophosphate phosphatase TERM 1916 1639666 - 1639690 + r 74 -5.8 -4.62085 | gap 1 CGTGATCCTTGATTA CCCATAGTTGT CTAG GCA-CTATGGG TTCTTTTTTGACAAT ACIAD1643 1639935 - 1639714 - | hypothetical protein TERM 1917 1640082 - 1640059 - R 93 -8.2 -5.59655 | opp_overlap 1640059 TAAAGCAATAAAAAA GCTGAATTCT ACTG AGAAATCAGC TTTTAATTACGAGAT TERM 1918 1640059 - 1640082 + r 83 -8.2 -4.41047 | opp_overlap 1640059 TAAAGCAATAAAAAA GCTGAATTCT ACTG AGAAATCAGC TTTTAATTACGAGAT ACIAD1644 1640362 - 1640135 - | hypothetical protein TERM 1919 1640586 - 1640561 - R 95 -12.1 -4.07535 | opp_overlap 1640559 1640558 1640564, overlap 1640564 AATTTTCATAAATAA TAATAGGTTAC AGTC GTAACCTATTA CATGTTATCTACATT TERM 1920 1640564 - 1640583 + r 77 -9.4 -3.23183 | opp_overlap 1640564 1640561, overlap 1640559 1640558 TTTCATAAATAATAA TAGGTTAC AGTC GTAACCTA TTACATGTTATCTAC TERM 1921 1640583 - 1640564 - R 89 -9.4 -4.15703 | opp_overlap 1640559 1640558 1640564, overlap 1640561 TTTCATAAATAATAA TAGGTTAC AGTC GTAACCTA TTACATGTTATCTAC trmA 1641699 - 1640614 - | tRNA (uracil-5-)-methyltransferase TERM 1922 1641985 - 1641951 - R 100 -13.8 -4.15833 | overlap 1641956 ATCATCAGGCTAAAA CAAAAGCCCCAAATAT TAA ACATTCAGGGCTTTTG GTAAATGATTAGATC TERM 1923 1641980 - 1641956 - R 88 -7.9 -5.09259 | overlap 1641951 CAGGCTAAAACAAAA GCCCCAAATAT TAA ACATTCAGGGC TTTTGGTAAATGATT putA 1645825 - 1642037 - | bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase TERM 1924 1642527 - 1642538 + g 75 -5.8 -4.72272 | TTAGGAAGTTGATGG GCAG GATA CTGC TTTTTAATCCACGCC lrp 1645929 - 1646432 + | leucine-responsive regulatory protein TERM 1925 1646438 - 1646421 - T 100 -11.3 -5.44119 | CGCAGTGTAAAAAAA GGGGCTT CTTA AAGCCCC TGATGAATGCCTTGA putP 1647959 - 1646466 - | SSS family major sodium/proline symporter TERM 1926 1647904 - 1647868 - G 77 -4.6 -5.02439 | gap 1, overlap 1647860 1647870 ATATAATCAGAAAAA TCTGTAGTGG-CTCTAT ATGC ATAGAGACCAATACATA CCATTGCCACGATAT ACIAD1650 1649041 - 1648340 - | putative cobalamin biosynthetic protein (CobB) TERM 1927 1649145 - 1649129 - R 100 -12.3 -5.28176 | opp_overlap 1649129 TGGACCTATAAAAAA TCCGCCA GTC TGGCGGA TCTTAGAGTTCAAAT TERM 1928 1649129 - 1649145 + r 87 -12.3 -3.09671 | opp_overlap 1649129 TGGACCTATAAAAAA TCCGCCA GTC TGGCGGA TCTTAGAGTTCAAAT pcaT 1650458 - 1649163 - | major facilitator superfamily alpha-ketoglutarate permease TERM 1929 1650379 - 1650367 - G 73 -2.7 -5.24799 | GCATAAATATAAAAA TCGAA CCA TTCAA CTAAATTACCCGAGG ACIAD1652 1651692 - 1650775 - | putative peroxidase TERM 1930 1650811 - 1650822 + g 75 -3 -5.20154 | overlap 1650818 AAGAAAGCGCCGAAT TTCA TGTC TGAA TTTTTTAGGTTCTGT TERM 1931 1651570 - 1651549 - G 70 -5.3 -4.44667 | gap 1, opp_overlap 1651550 1651551 TTCTGGAATAATAAA TTCAAA-ACC TTT GGTATTTGAA AATAAGAAAGGCACC TERM 1932 1651592 - 1651580 - G 71 -4.8 -4.67697 | TTTGAAAATAAGAAA GGCA CCCAT TGCC AACTTTGCATACCTA ACIAD1653 1652244 - 1651702 - | hypothetical protein fadH 1652368 - 1654392 + | 2,4-dienoyl-CoA reductase TERM 1933 1654405 - 1654446 + F 100 -10.3 -4.24413 | opp_overlap 1654411, overlap 1654402 TAATAATTTAATCAT TTGAAAGGTTTAACTCACT TTAT AGAGGGTTGAACCTTACAA TTATTTGTTAATAGA ACIAD1655 1654472 - 1655605 + | hypothetical protein TERM 1934 1655757 - 1655778 + T 95 -6.7 -5.95539 | gap 1, opp_overlap 1655731, overlap 1655732 TCTTTGAAAATTCCA GCTTAT-CTG TAA CAGGATAAGC TTTTTTTATTTAGAA ACIAD1656 1656711 - 1655794 - | putative transcriptional regulator ACIAD1657 1657237 - 1656800 - | hypothetical protein TERM 1935 1657316 - 1657303 - H 71 -3.1 -5.07652 | opp_overlap 1657285 TGTTTTAAAATAAAA CACGA GTTG TCATG AAGATCAATCCATCT ACIAD1658 1657407 - 1657733 + | hypothetical protein ACIAD1659 1658688 - 1657741 - | glycine cleavage system transcriptional activator TERM 1936 1658992 - 1659002 + G 82 -6.8 -4.8622 | GTGTTCATTTTAATT GGGA AGA TCCC TTTTTGCTTGAGCAA gcdH 1658940 - 1660166 + | glutaryl-CoA dehydrogenase TERM 1937 1660194 - 1660227 + F 93 -11.2 -4.08485 | opp_overlap 1660192 1660195, overlap 1660195 AATCAAGATTCAATG ATTAGGGATTCACA AAGACA TGTGAATCCCTAAA TTTCATTTGAGTAAA TERM 1938 1660195 - 1660226 + F 95 -14.7 -3.04609 | opp_overlap 1660192 1660195, overlap 1660194 ATCAAGATTCAATGA TTAGGGATTCACA AAGACA TGTGAATCCCTAA ATTTCATTTGAGTAA TERM 1939 1660226 - 1660195 - f 95 -14.7 -2.79248 | opp_overlap 1660195 1660194, overlap 1660192 ATCAAGATTCAATGA TTAGGGATTCACA AAGACA TGTGAATCCCTAA ATTTCATTTGAGTAA TERM 1940 1660296 - 1660330 + F 76 -2.9 -5.4756 | opp_overlap 1660291 1660296 AGAAAGCAGATAAAA TTGCATTATTGCTTA ATAAA TAAGCTAAAAAGCAA TTTTTTATTCAGGTT TERM 1941 1662215 - 1662196 - f 72 -9.2 -2.65808 | opp_overlap 1662202, overlap 1662193 AGTCGTAACAAGGTA GCCGTAGG GGAA CCTGCGGC TGGATCACCTCCTTA TERM 1942 1662334 - 1662318 - f 81 -10.9 -2.62396 | overlap 1662320 1662331 CAGTTGGTTAGAGCA CACGCTT GAT AAGCGTG GGGTCACAAGTTCAA TERM 1943 1662511 - 1662565 + F 85 -9.1 -3.91072 | gap 1, opp_overlap 1662516 1662530 1662533, overlap 1662530 1662533 1662560 CGGCTAAGGTGTAGA TTATAGAACTTAGTAAAAAGAAGATC ATGA GATCTTGTTTT-ATTAAGTTCTGTGA TTTATCACAGTTTAG TERM 1944 1662560 - 1662575 + F 73 -7.6 -3.8766 | overlap 1662511 TTGTTTTATTAAGTT CTGTGA TTTA TCACAG TTTAGTGTGATCTGA TERM 1945 1663310 - 1663298 - f 89 -9.1 -4.2354 | GAAAGGCGAAAAGAA CCCCT GTG AGGGG AGTGAAATAGATCCT TERM 1946 1664102 - 1664088 - f 80 -7.1 -4.56607 | overlap 1664080 TGAGTAACGACAAAA CGGGT GAAAA ACCCG TTCGCCGAAAGACCA TERM 1947 1666064 - 1666030 - f 100 -14.4 -3.35597 | opp_overlap 1666035 1666060, overlap 1666035 GCCAGCTTTTAAATA TAAAAGCCCCCTGAAT CAA AATCAGGGGGCTTTTT TTATGCAAAGAAATA TERM 1948 1666059 - 1666035 - f 100 -14.3 -4.78848 | opp_overlap 1666035, overlap 1666030 CTTTTAAATATAAAA GCCCCCTGAAT CAA AATCAGGGGGC TTTTTTTATGCAAAG TERM 1949 1666035 - 1666059 + F 100 -14.3 -5.60993 | opp_overlap 1666035 1666030 CTTTTAAATATAAAA GCCCCCTGAAT CAA AATCAGGGGGC TTTTTTTATGCAAAG TERM 1950 1666161 - 1666130 - f 87 -9.6 -4.06964 | opp_overlap 1666140, overlap 1666132 1666133 1666140 ACACATAGAACTAAA CAGTAAAAAAGGGC TCAA GCCCTTTTTTAGTA CGGTTAAATAATGAT TERM 1951 1666159 - 1666132 - f 82 -10 -3.617 | opp_overlap 1666140, overlap 1666130 1666133 1666140 ACATAGAACTAAACA GTAAAAAAGGGC TCAA GCCCTTTTTTAG TACGGTTAAATAATG TERM 1952 1666158 - 1666133 - f 89 -13.5 -2.75935 | opp_overlap 1666140, overlap 1666132 1666130 1666140 CATAGAACTAAACAG TAAAAAAGGGC TCAA GCCCTTTTTTA GTACGGTTAAATAAT TERM 1953 1666151 - 1666140 - f 89 -7.2 -5.32699 | opp_overlap 1666140, overlap 1666133 1666132 1666130 CTAAACAGTAAAAAA GGGC TCAA GCCC TTTTTTAGTACGGTT TERM 1954 1666140 - 1666151 + F 88 -7.2 -5.16237 | opp_overlap 1666140 1666133 1666132 1666130 CTAAACAGTAAAAAA GGGC TCAA GCCC TTTTTTAGTACGGTT TERM 1955 1666459 - 1666475 + G 70 -5.2 -4.46656 | opp_overlap 1666458, overlap 1666464 CCTTGGAGCCAATAT GCATTT ATGCA AAATGC TTTTCATATTATAGG ACIAD1661 1666354 - 1666896 + | putative acetyltransferase TERM 1956 1666952 - 1666930 - f 73 -7.8 -3.82824 | opp_overlap 1666933, overlap 1666931 1666933 TATGATTCAGAATAA TGATTTGGAA TCA TTCCAAATCT AATAAGGATTAAGAT TERM 1957 1666951 - 1666931 - f 83 -11.3 -2.89212 | opp_overlap 1666933, overlap 1666930 1666933 ATGATTCAGAATAAT GATTTGGAA TCA TTCCAAATC TAATAAGGATTAAGA cysK 1666966 - 1667964 + | subunit of cysteine synthase A and O-acetylserine sulfhydrolase A, PLP-dependent enzyme ACIAD1663 1668578 - 1668063 - | hypothetical protein TERM 1958 1668684 - 1668651 - R 75 -6.9 -4.26463 | gap 1, opp_overlap 1668651 1668655, overlap 1668654 1668655 AGAGATCAAGATAAA CAACCCATCCAAAAAT TTG ATTCTTGGATGG-TAG TTTGCTGTTATTCAT TERM 1959 1668682 - 1668654 - R 93 -9.7 -4.2338 | opp_overlap 1668651 1668655, overlap 1668651 1668655 GATCAAGATAAACAA CCCATCCAAAAAT TTG ATTCTTGGATGGT AGTTTGCTGTTATTC TERM 1960 1668681 - 1668655 - R 88 -13.2 -3.12943 | opp_overlap 1668651 1668655, overlap 1668654 1668651 ATCAAGATAAACAAC CCATCCAAAAAT TTG ATTCTTGGATGG TAGTTTGCTGTTATT TERM 1961 1668655 - 1668681 + r 83 -11 -3.04242 | opp_overlap 1668655 1668654 1668651, overlap 1668651 ATCAAGATAAACAAC CCATCCAAAAAT TTG ATTCTTGGATGG TAGTTTGCTGTTATT ACIAD1664 1669765 - 1668824 - | putative phosphatidate cytidylyltransferase ACIAD1665 1670448 - 1669762 - | putative acyltransferase ACIAD1666 1670902 - 1670462 - | hypothetical protein ACIAD1667 1672263 - 1670899 - | putative phosphatase TERM 1962 1671880 - 1671865 - G 70 -7.6 -3.72695 | AGGCGCCTGATTAAA GGGTTT ATCA AAACCC ATCAGAATATTAAAC TERM 1963 1672070 - 1672059 - G 75 -2.2 -5.35459 | ACAGACCATAAAAAA GATC GATT GACC AGTAGGGAATAATTG ACIAD1668 1674027 - 1672279 - | putative methylase TERM 1964 1672316 - 1672339 + g 73 -5.4 -4.65895 | opp_overlap 1672322, overlap 1672318 ACAGTAAAGATTCCG AATTGATCAA TATA TTGATCAATC TTTTTAAATCCAGCC TERM 1965 1672318 - 1672337 + g 74 -8 -3.94812 | opp_overlap 1672322, overlap 1672316 AGTAAAGATTCCGAA TTGATCAA TATA TTGATCAA TCTTTTTAAATCCAG TERM 1966 1672813 - 1672830 + g 71 -4.2 -4.87665 | CAGAATTTTAAGTGG TTGATC TGCCGC GATCAA TTTTTCTGCATAGAC ACIAD1669 1674688 - 1674047 - | putative CDP-alcohol phosphatidyltransferase ACIAD1670 1674836 - 1675303 + | hypothetical protein TERM 1967 1676089 - 1676108 + G 80 -5 -5.1517 | overlap 1676090 CCTACCCATCGATTG ACGATCAA GGAG TTGATCGC TTTTTGCTTTATTTT TERM 1968 1676090 - 1676107 + G 73 -8.5 -3.65442 | overlap 1676089 CTACCCATCGATTGA CGATCAA GGAG TTGATCG CTTTTTGCTTTATTT ACIAD1671 1675470 - 1677020 + | hypothetical protein TERM 1969 1677123 - 1677112 - f 77 -3 -5.49568 | opp_overlap 1677112 1677113, overlap 1677113 AATTCAAAATAAAAA TCAA CTAT TTGA GTTGTTAATTAAGTT TERM 1970 1678878 - 1678862 - g 79 -10.9 -3.14878 | opp_overlap 1678864 1678873, overlap 1678860 CTGTGGAATGGAACA CATGCCA TGC TGGCATG GTATGCCTCGTTATT ACIAD1672 1677269 - 1679410 + | haloacid dehalogenase-like family hydrolase TERM 1971 1679454 - 1679495 + T 70 -4.6 -4.74598 | opp_overlap 1679464 1679465 CATTTAATTGATTTA CACCAAAAATCTTACT TTATAAAAGT AGCTAGATTTTTGGTG TTTCTTTTAAGTTTG ACIAD1673 1680294 - 1679602 - | hypothetical protein ACIAD1674 1680719 - 1680291 - | putative transporter ACIAD1675 1680830 - 1681729 + | LysR family transcriptional regulator ACIAD1676 1681798 - 1682217 + | hypothetical protein TERM 1972 1682288 - 1682303 + G 74 -4.7 -4.75356 | TGGCATGTCGAATCC CGAGA AAGTTC TCTCG TTTTTAGATATCTTT TERM 1973 1682358 - 1682371 + G 74 -4.5 -4.89562 | TTTGTCATGCTTGGT GCCAT ACTG GTGGC TTTTGTTCCTTTTCA ACIAD1677 1682226 - 1682624 + | hypothetical protein ACIAD1678 1682629 - 1683507 + | putative metallo-beta lactamase ACIAD1679 1683512 - 1683871 + | hypothetical protein etfD 1685806 - 1684094 - | electron transfer flavoprotein-ubiquinone oxidoreductase mucK 1687178 - 1685937 - | major facilitator superfamily cis,cis-muconate transporter TERM 1974 1687288 - 1687320 + H 81 -10.1 -3.49383 | opp_overlap 1687293 1687297, overlap 1687293 1687297 TAAATCAATAATTGT AAAAATAAATATCGC ATA GCGATGTTTATTTTG TGTTATTAAATTTTT TERM 1975 1687315 - 1687293 - H 83 -7.8 -4.70626 | opp_overlap 1687293 1687288 1687297, overlap 1687297 CAATAATTGTAAAAA TAAATATCGC ATA GCGATGTTTA TTTTGTGTTATTAAA TERM 1976 1687293 - 1687315 + H 100 -10 -4.79752 | opp_overlap 1687293 1687297, overlap 1687288 1687297 CAATAATTGTAAAAA TAAATATCGC ATA GCGATGTTTA TTTTGTGTTATTAAA TERM 1977 1687311 - 1687297 - H 73 -4.2 -4.88293 | opp_overlap 1687293 1687288 1687297, overlap 1687293 AATTGTAAAAATAAA TATCGC ATA GCGATG TTTATTTTGTGTTAT TERM 1978 1687297 - 1687311 + H 83 -6.4 -4.89519 | opp_overlap 1687297 1687293, overlap 1687293 1687288 AATTGTAAAAATAAA TATCGC ATA GCGATG TTTATTTTGTGTTAT caiB 1687510 - 1688727 + | L-carnitine dehydrogenase TERM 1979 1688809 - 1688823 + F 73 -8.6 -3.27109 | opp_overlap 1688809 1688808 1688805, overlap 1688808 CAAATAGATTATAAT TTTCGC AAT GCGAAA TATTAATTGAGTTGA dcaS 1688853 - 1689698 + | IclR family transcriptional regulator TERM 1980 1689721 - 1689748 + T 100 -10.1 -5.33405 | CGCAAAATGCGTACG CCAGTAATATT CCATTC AATATTACTGG TTTTTATTTAATGGA ACIAD1685 1690941 - 1689742 - | MFS family transporter TERM 1981 1690959 - 1690969 + H 79 -5.4 -5.06414 | AATTTCACTTGAGTT TTGC AGT GCAA TTTTTGTTGCACAAA caiB 1691122 - 1692345 + | L-carnitine dehydrogenase TERM 1982 1692350 - 1692328 - T 72 -4.8 -4.78933 | opp_overlap 1692333, overlap 1692330 TTAAAAGATAGAAAA GTGATTCAAC AAG GTTGATTCTC TTGGAGCAGGCGGGC TERM 1983 1692353 - 1692371 + T 100 -10.3 -4.98531 | AAGGTTGATTCTCTT GGAGCAG GCGGG CTGCTCC TTTTTAATTTAAAGA dcaR 1693225 - 1692380 - | IclR family transcriptional regulator TERM 1984 1693288 - 1693324 + r 100 -14.7 -4.08064 | opp_overlap 1693285 1693290, overlap 1693290 TTGCTTTGTAAATTG AATCCATTCATCACAAT GCT GTTGTGATGAATGGATA TTTTCAAGAAAGGTT TERM 1985 1693322 - 1693290 - R 100 -16.6 -3.27525 | opp_overlap 1693288 1693290, overlap 1693285 GCTTTGTAAATTGAA TCCATTCATCACAA TGCTG TTGTGATGAATGGA TATTTTCAAGAAAGG TERM 1986 1693290 - 1693322 + r 100 -17.3 -3.63744 | opp_overlap 1693290 1693285, overlap 1693288 GCTTTGTAAATTGAA TCCATTCATCACAAT GCT GTTGTGATGAATGGA TATTTTCAAGAAAGG dcaF 1694543 - 1693338 - | acetyl-CoA acetyltransferase dcaH 1696081 - 1694564 - | 3-hydroxybutyryl-CoA dehydrogenase dcaC 1696894 - 1696130 - | 3-ketoacyl-(acyl-carrier-protein) reductase dcaE 1697709 - 1696924 - | enoyl-CoA hydratase TERM 1987 1697863 - 1697877 + H 88 -7.2 -4.85782 | CTGTATGGTTTTTAA TTTCGT TTA ACGAAA TTTATTTTTAAAAAG TERM 1988 1697964 - 1697945 - H 73 -8 -3.6052 | overlap 1697948 CAAAATGAAGCAGAA CAAGATTT TGTG AAATCTTG CAGTCTGGCTATTTT dcaA 1698028 - 1699182 + | acyl-CoA dehydrogenase TERM 1989 1699222 - 1699200 - f 85 -12.1 -3.06796 | opp_overlap 1699199 1699198 1699197, overlap 1699184 1699202 CCTTATTTTACTTAA CATGAGGCA GAGGA TGCCTCATG CATATATTGTCTGAG TERM 1990 1699220 - 1699202 - f 71 -8.9 -3.09327 | opp_overlap 1699199 1699198 1699197, overlap 1699184 1699200 TTATTTTACTTAACA TGAGGCA GAGGA TGCCTCA TGCATATATTGTCTG TERM 1991 1699970 - 1699951 - g 75 -5.1 -4.88405 | opp_overlap 1699951, overlap 1699938 AATCTTTAAAGAAAA GAAACAT GGCATT ATGTTTC TGCTTTGGGTAGTGA dcaK 1699220 - 1700527 + | dicarboxylic acid major facilitator family transport protein TERM 1992 1701062 - 1701072 + G 73 -5.4 -4.6526 | opp_overlap 1701058 1701062 GTATCCAAAATCAAT CAGT TCG ACTG TTTTTCCAGATTTAT dcaI 1700817 - 1701488 + | acyl-CoA-transferase subunit A dcaJ 1701485 - 1702159 + | acyl-CoA-transferase subunit B dcaP 1702244 - 1703560 + | porin precurseur in catabolism of dicarboxylic acids ACIAD1698 1703579 - 1704781 + | MFS family transporter TERM 1993 1704809 - 1704783 - T 82 -9.6 -3.53745 | GACAGCTTAAATGAA TTGATTAAGCCA TAA CGACTTAATCAA TAATAAAATTTAGCG ACIAD1699 1705241 - 1704819 - | putative protein involved in aromatic compounds catabolism TERM 1994 1706575 - 1706595 + G 74 -9.7 -3.14132 | GATCCAATTATTGTC CATCCTGCG GTA CGCAGTATG TTGATGACCCAAAAA acdB 1705546 - 1707348 + | acyl-CoA dehydrogenase TERM 1995 1707375 - 1707394 + F 71 -6.5 -4.22346 | opp_overlap 1707375 CATGGAGATATTGAA CATCAGT AGTCGG ACTGATG TTTTAAATAGCTTTA ACIAD1701 1707429 - 1707704 + | putative enoyl-CoA hydratase TERM 1996 1708029 - 1708054 + T 100 -12.1 -4.46926 | opp_overlap 1708014 1708029, overlap 1708052 TATTATGGTCAATAA TACTCAATCTA AGTC TAGATTGAGTA TTTTCTAATAAAATA TERM 1997 1708054 - 1708029 - T 91 -12.1 -3.63991 | opp_overlap 1708029 1708052, overlap 1708014 TATTATGGTCAATAA TACTCAATCTA AGTC TAGATTGAGTA TTTTCTAATAAAATA pcaU 1708945 - 1708109 - | regulatory protein for pca operon (activator) TERM 1998 1709017 - 1709037 + H 93 -11.3 -3.98913 | opp_overlap 1709014 ATAACTAAATCATGT TTTGTTCGA TTA TCGAACAAA TTATTTAAATATCGA pcaI 1709228 - 1709914 + | 3-oxoadipate CoA-transferase subunit A (Beta-ketoadipate:succinyl-CoA transferase subunit A) pcaJ 1709925 - 1710578 + | 3-oxoadipate CoA-transferase subunit B (Beta-ketoadipate:succinyl-CoA transferase subunit B) TERM 1999 1711222 - 1711200 - g 79 -8.5 -4.09685 | overlap 1711204 GGCTACTTTGCAAAA GAAATCGTG CCTGT CACGATTCC ACAGCGCAAAGGAGA TERM 2000 1711218 - 1711204 - g 75 -5.7 -4.65263 | overlap 1711200 ACTTTGCAAAAGAAA TCGTG CCTGT CACGA TTCCACAGCGCAAAG pcaF 1710591 - 1711796 + | beta-ketoadipyl CoA thiolase pcaB 1711808 - 1713163 + | 3-carboxy-cis,cis-muconate cycloisomerase (3-carboxymuconate lactonizing enzyme) (CMLE) TERM 2001 1713880 - 1713892 + G 70 -7.7 -3.66803 | CAGTTTGAAGTCATT GATGC ATC GCATC TTTCAAATATTGAAC pcaD 1713160 - 1713960 + | 3-oxoadipate enol-lactonase TERM 2002 1714524 - 1714539 + G 72 -6.1 -4.4078 | overlap 1714502 1714518 GTGGTTTTATCAGTA GCTGG CTTATT CCAGC TTTTGGTTGGCACAG TERM 2003 1714860 - 1714872 + G 72 -7.7 -3.76224 | TTTATCTGTTGACCA GTTGG TTG CCAAC TTTGATGCGTGAAAC pcaK 1713983 - 1715356 + | 4-hydroxybenzoate transporter pcaC 1715372 - 1715776 + | gamma-carboxymuconolactone decarboxylase (CMD) TERM 2004 1716486 - 1716498 + G 71 -9.1 -3.34344 | opp_overlap 1716477 ACATTACGCTTCGTG GTCGC CGC GCGAC TTACTTCGAAAATGA pcaH 1715798 - 1716523 + | protocatechuate 3,4-dioxygenase beta chain (3,4-PCD) TERM 2005 1717050 - 1717030 - g 74 -6.9 -4.39318 | overlap 1717046 GAAGCAAATGCAAAA GATCCTGTT TTA AACAGTATC GAGTGGGCGACACGT pcaG 1716541 - 1717170 + | protocatechuate 3,4-dioxygenase alpha chain (3,4-PCD) aroD 1717288 - 1718112 + | 3-dehydroquinate dehydratase TERM 2006 1718309 - 1718293 - g 74 -9.5 -3.25481 | opp_overlap 1718293, overlap 1718296 AAATAGCGCACAAGA GAATCAG ATT CTGATTC AGGCTGTTGGTAAGG TERM 2007 1719362 - 1719350 - g 87 -6.3 -5.14965 | ACTGTCAGTAAAAAA CAACT TAC AGTTG AAGTTAAAGGAACAC quiC 1718132 - 1719592 + | 3-dehydroshikimate dehydratase (DHS dehydratase) (DHSase) TERM 2008 1720692 - 1720708 + G 70 -5.1 -4.54727 | CCTTTTGATAGTCGC CCAAATG ATT CAATTGG TTTTGGTTTGGCAAA quiX 1719660 - 1720979 + | porin TERM 2009 1721049 - 1721090 + F 72 -5.9 -4.43844 | opp_overlap 1721057 1721063, overlap 1721051 1721054 TGATTTTAAACTTAA TTCGAACAGCTAAAGTCAT TAAC ATGACTTTAGCTGAATGTG TTTTATACGTGATGA TERM 2010 1721051 - 1721088 + F 90 -10.7 -3.82519 | opp_overlap 1721057 1721063, overlap 1721049 1721054 ATTTTAAACTTAATT CGAACAGCTAAAGTCAT TAAC ATGACTTTAGCTGAATG TGTTTTATACGTGAT TERM 2011 1721054 - 1721085 + F 87 -13.2 -2.68789 | opp_overlap 1721057 1721063, overlap 1721051 1721049 TTAAACTTAATTCGA ACAGCTAAAGTCAT TAAC ATGACTTTAGCTGA ATGTGTTTTATACGT TERM 2012 1721082 - 1721057 - f 90 -13.5 -3.10236 | opp_overlap 1721054 1721051 1721049, overlap 1721063 AACTTAATTCGAACA GCTAAAGTCAT TAAC ATGACTTTAGC TGAATGTGTTTTATA TERM 2013 1721180 - 1721200 + F 71 -5.5 -4.54821 | TCAAGAAAAGTCTCA CATCATATT GAA AGTATGGTG TTTTATACTTGGGCT quiA 1721187 - 1723583 + | quinate/shikimate dehydrogenase [pyrroloquinoline-quinone] (NAD(P)-independent quinate dehydrogenase) TERM 2014 1723598 - 1723625 + T 90 -11.4 -3.81691 | opp_overlap 1723603, overlap 1723603 ATTCAATCGCTTAAA AAAAAGGGACTC TCAG GAGTCCCTTTTA TTCTTACTATATATT TERM 2015 1723603 - 1723620 + T 100 -11.3 -4.93661 | opp_overlap 1723603, overlap 1723598 ATCGCTTAAAAAAAA GGGACTC TCAG GAGTCCC TTTTATTCTTACTAT TERM 2016 1723620 - 1723603 - T 100 -11.3 -5.75945 | opp_overlap 1723598 1723603 ATCGCTTAAAAAAAA GGGACTC TCAG GAGTCCC TTTTATTCTTACTAT ACIAD1717 1724834 - 1723656 - | putative regulatory protein (PobS) pobR 1725816 - 1725001 - | p-hydroxybenzoate hydroxylase transcriptional activator TERM 2017 1725567 - 1725557 - G 71 -3.2 -5.03945 | TAAGAACTAGAAAAA CGTA AAA CACG ATGTGTAAGCCAAAA TERM 2018 1725839 - 1725857 + H 81 -9.6 -3.45023 | opp_overlap 1725822, overlap 1725840 AAATCCAAAATGGTT TTGTCCGA TCA TCGGACAG TTGTAATGCTAATCG TERM 2019 1725840 - 1725856 + H 81 -10.9 -2.66692 | opp_overlap 1725822, overlap 1725839 AATCCAAAATGGTTT TGTCCGA TCA TCGGACA GTTGTAATGCTAATC TERM 2020 1726494 - 1726483 - g 71 -4.4 -4.76874 | opp_overlap 1726483 AAGATAAAATTAAAA CCTT TGAA AAGG TCTATCCATTTGGTT pobA 1725951 - 1727165 + | 4-hydroxybenzoate 3-monooxygenase TERM 2021 1727193 - 1727174 - T 100 -12.2 -5.48213 | opp_overlap 1727174 CAGCTAAAACAAAAA GAGAGCGA TTAG TCGCTCTC TTTTTTATCTCGGCT TERM 2022 1727174 - 1727193 + T 100 -12.2 -5.37043 | opp_overlap 1727174 CAGCTAAAACAAAAA GAGAGCGA TTAG TCGCTCTC TTTTTTATCTCGGCT hcaG 1728955 - 1727213 - | chlorogenate esterase ACIAD1721 1729367 - 1728978 - | hypothetical protein TERM 2023 1729409 - 1729391 - R 100 -13.2 -4.68593 | opp_overlap 1729391 TCCATCATTGAAAAA GCTCCAGA AGA TCTGGAGC TTATTGTTATTATTT TERM 2024 1729391 - 1729409 + r 100 -13.2 -4.17009 | opp_overlap 1729391 TCCATCATTGAAAAA GCTCCAGA AGA TCTGGAGC TTATTGTTATTATTT hcaE 1730669 - 1729419 - | porin hcaD 1731884 - 1730745 - | acyl coenzyme A dehydrogenase TERM 2025 1731217 - 1731195 - G 95 -11.3 -3.74792 | opp_overlap 1731193 CATCAGATATGCAAA GCCTTGGCC TTCTT GACCAAGGC GCTGAGTTACTGGTA hcaC 1733828 - 1731954 - | feruloyl-CoA synthase TERM 2026 1733852 - 1733865 + r 79 -5.3 -5.1101 | CGTTCACTCCATGTT GTACA TCGC TGTAC TTTTTTGCATCATGC TERM 2027 1733870 - 1733882 + r 84 -6.3 -5.05079 | CATCGCTGTACTTTT TTGCA TCA TGCAA TTTTTATATCGTTAT TERM 2028 1733935 - 1733907 - R 75 -6.9 -4.09685 | gap 1, opp_overlap 1733907, overlap 1733910 CGTTATTTTTTAAAA CCA-TACCCAAT GGTTAA ATTGGGTAATGG CGTGGCTGTGTTTGT hcaB 1735371 - 1733920 - | hydroxybenzaldehyde dehydrogenase hcaA 1736241 - 1735408 - | p-hydroxycinnamoyl CoA hydratase/lyase TERM 2029 1735706 - 1735730 + g 71 -10.1 -2.66634 | overlap 1735703 ATTGCTTCAGCTTCT TTACCGGTAAA AGT TTTACCGGTCA TAATGTAATACAGTG TERM 2030 1736656 - 1736638 - g 76 -9.6 -3.50572 | opp_overlap 1736638 ATTTATGTTAGATAA TGCCCAAA TGG CTTGGGCA TTTAGTGCTGCAATT TERM 2031 1736638 - 1736656 + G 78 -8.9 -3.79519 | opp_overlap 1736638 ATTTATGTTAGATAA TGCCCAA ATGGC TTGGGCA TTTAGTGCTGCAATT hcaK 1736498 - 1737730 + | putative 3-hydroxyphenylpropionic transporter MhpT TERM 2032 1737737 - 1737774 + F 100 -11.5 -5.252 | opp_overlap 1737731 1737744, overlap 1737744 GCTCAGTAACATTCT TTTAAAAGTATGGGGCT GATT GGCCTCATACTTTTTAA TTTTTTATGAAGATA TERM 2033 1737767 - 1737744 - f 71 -6.7 -4.09511 | opp_overlap 1737737 1737744, overlap 1737731 AACATTCTTTTAAAA GTATGGGGC TGATTG GCCTCATAC TTTTTAATTTTTTAT TERM 2034 1737744 - 1737767 + F 100 -9.6 -5.27769 | opp_overlap 1737731 1737744, overlap 1737737 AACATTCTTTTAAAA GTATGGGGCT GATT GGCCTCATAC TTTTTAATTTTTTAT ACIAD1728 1737794 - 1738273 + | putative transcriptional regulator ACIAD1729 1738921 - 1738280 - | TetR/AcrR family transcriptional regulator ACIAD1730 1739279 - 1740241 + | hypothetical protein ACIAD1731 1740301 - 1741128 + | putative short-chain dehydrogenase TERM 2035 1742685 - 1742669 - g 77 -3.7 -5.08824 | TGGTCATTGAAAAAA TTAAGAC AAC GTCTGAA AAGCTTGAATATTCG ACIAD1733 1741220 - 1742749 + | putative flavin-binding monooxygenase TERM 2036 1742770 - 1742797 + G 78 -7.1 -4.52347 | TAGAAGATGGATTGC TCAAGATGGCT TTTTAT AACCATCTTGA TTTTGATCTTATTTA ACIAD1734 1742761 - 1743708 + | putative transferase ACIAD1735 1743846 - 1744352 + | hypothetical protein TERM 2037 1744393 - 1744373 - T 100 -9.8 -6.19302 | opp_overlap 1744373, overlap 1744392 ACAGAATAAAAAAAA CCCTTATC GTATA GATAAGGG TTTTTTATAAACCAC TERM 2038 1744373 - 1744393 + T 100 -9.8 -5.24129 | opp_overlap 1744373 1744392 ACAGAATAAAAAAAA CCCTTATC GTATA GATAAGGG TTTTTTATAAACCAC TERM 2039 1744430 - 1744452 + T 72 -4.8 -4.66833 | overlap 1744433 1744437 1744444 AATTAGGCTTTTTCT GTGGTTTCAG CTG CTGGAGCTGC TTTTTCAGCTTCCAA accC 1745805 - 1744417 - | biotin carboxylase (A subunit of acetyl-CoA carboxylase) TERM 2040 1744509 - 1744522 + g 81 -5.3 -5.1523 | AATGGATGTCCATCG CTTCT TTTA AGAAG TTTTTATCTTGTAAG TERM 2041 1745417 - 1745430 + g 80 -4.5 -5.14965 | overlap 1745415 TCACAACCTGGAACT GTTGG AACA CCAGC TTTTTTCATGGCAAT accB 1746244 - 1745822 - | biotin carboxyl carrier protein of acetyl-CoA carboxylase (BCCP) aroQ 1746721 - 1746272 - | 3-dehydroquinate dehydratase TERM 2042 1746337 - 1746306 - G 78 -10.2 -3.32844 | TTTTGGATGGCATAA TCCAGTGCAAAGTG ATAA CCCTTTGCACCGAA ACCGCAAATTACGCC TERM 2043 1746940 - 1746960 + r 72 -4.8 -4.83243 | opp_overlap 1746939 1746940, overlap 1746939 TAACGTATTTTAAAC TGAATTGA CCAAA TCAGTTCA TTTGTTTTGTGTAAC TERM 2044 1747342 - 1747319 - R 77 -3.2 -5.44721 | gap 1 ATCAGTTTAAAAAAA GGCACAT-GTA GTT CACGATATGCC TTTCTATTCAAAAAA TERM 2045 1747784 - 1747754 - R 93 -11.4 -3.97102 | ATTTAAAATTAACAA TATAGCGTTAAG GCTCAAA CTTAACGCTATA AGAAGACATAAACTT ACIAD1740 1748688 - 1747804 - | putative GTP cyclohydrolase TERM 2046 1748083 - 1748069 - G 74 -6.4 -4.51174 | TGAGCATAATCAAAA GGCTGT ACC ACAACC GTTGCAATACTACGC ACIAD1741 1749944 - 1748736 - | putative regulatory protein (nitrile hydratase activator like) ACIAD1742 1750840 - 1750133 - | hypothetical protein TERM 2047 1751000 - 1750957 - R 77 -9 -3.54902 | opp_overlap 1750956 1750953 1750963 1750965, overlap 1750953 1750960 TGATGTAACAATGAA GATGTACGAGACTTTTCTAA TGAA TTGGAAAAGTCCTGTACTTC ACATTTTGATTATTC TERM 2048 1750997 - 1750960 - R 72 -9.3 -2.59971 | opp_overlap 1750956 1750953 1750963 1750965, overlap 1750957 1750953 TGTAACAATGAAGAT GTACGAGACTTTTCTAA TGAA TTGGAAAAGTCCTGTAC TTCACATTTTGATTA ACIAD1743 1752011 - 1751010 - | putative oxydoreductase protein, zinc-containing (quinone oxidoreductase, NADPH dependent) TERM 2049 1752051 - 1752068 + r 75 -7.1 -4.13014 | opp_overlap 1752046 1752051 1752053 TCTTCATAAATGATA TATCGTA TTTA TACGATA TTTTAGACATCTCCA TERM 2050 1752214 - 1752197 - R 100 -9.9 -4.86861 | opp_overlap 1752197 TAAGAAATAAAGAAA GGAACTC ATAG GAGTTCC TTTTTAAATGGGATT TERM 2051 1752197 - 1752214 + r 100 -9.9 -4.67011 | opp_overlap 1752197 TAAGAAATAAAGAAA GGAACTC ATAG GAGTTCC TTTTTAAATGGGATT aspA 1753650 - 1752232 - | aspartate ammonia-lyase ACIAD1745 1753787 - 1754677 + | LysR family transcriptional regulator ACIAD1746 1754767 - 1754967 + | hypothetical protein ACIAD1747 1755162 - 1755623 + | MarR family transcriptional regulator TERM 2052 1755685 - 1755659 - T 100 -16.8 -3.73953 | opp_overlap 1755649 1755659 ATCATTCTGATGAAA CCAGACTTTGTA TAT TACAAAGTCTGG TTTTTGCATTAGCCT TERM 2053 1755659 - 1755685 + T 100 -16.8 -4.74504 | opp_overlap 1755659, overlap 1755649 ATCATTCTGATGAAA CCAGACTTTGTA TAT TACAAAGTCTGG TTTTTGCATTAGCCT ACIAD1748 1755951 - 1755694 - | hypothetical protein cioB 1757099 - 1756089 - | ubiquinol oxidase subunit II, cyanide insensitive cioA 1758523 - 1757096 - | ubiquinol oxidase subunit I, cyanide insensitive TERM 2054 1758217 - 1758207 - G 79 -3.2 -5.26875 | GCCTCAAGGAAAAAA GCAC TGA GTAC TTCATAGCTGAGTAA TERM 2055 1758380 - 1758366 - G 70 -5.7 -4.24711 | CAAAATTTGAATAAA TCCTG ATAAA CAGGA TTGCCAGTATGTAAC ACIAD1751 1759107 - 1758661 - | hypothetical protein TERM 2056 1760239 - 1760258 + G 75 -5.8 -4.66537 | gap 1 CTTGGGTCGATTTTG TGGTTG-TC GCA GATCAACCA TTTTATATTGAGCCG mdcA 1759599 - 1761278 + | malonate decarboxylase, alpha subunit mdcB 1761272 - 1762180 + | triphosphoribosyl-dephospho-CoA synthase mdcC 1762168 - 1762467 + | malonate decarboxylase subunit delta mdcD 1762460 - 1763311 + | malonate decarboxylase subunit beta mdcE 1763308 - 1764135 + | malonate decarboxylase, gamma subunit mdcG 1764126 - 1764734 + | phosphoribosyl-dephospho-CoA transferase mdcH 1764747 - 1765673 + | acyl-carrier-protein S-malonyltransferase mdcL 1765721 - 1766134 + | malonate transporter mdcM 1766127 - 1766894 + | malonate transporter TERM 2057 1766904 - 1766932 + T 71 -8.8 -3.11738 | overlap 1766903 GCTTAATTTTCACTC ATGGGCAGCGGG CTAAA TCTGCTGCCCAA ATTTATATTGCAATA mdcR 1767855 - 1766935 - | malonate utilization transcriptional regulator TERM 2058 1767568 - 1767586 + g 77 -10.3 -3.14327 | opp_overlap 1767565, overlap 1767566 TAAATGCAATACTTT GGCAGCA AAACC TGCTGCC TCTCTGGTTTTATTG srpH 1768801 - 1767893 - | serine acetyltransferase TERM 2059 1770698 - 1770714 + G 75 -5.1 -4.88918 | opp_overlap 1770697 1770700, overlap 1770700 TACGTCAGACCCAAT GATGATG GAA CATCAAC TTTTGTTTCAGGTGG ACIAD1764 1769018 - 1771192 + | putative ferric siderophore receptor protein TERM 2060 1771365 - 1771392 + F 80 -2.6 -5.65927 | opp_overlap 1771373, overlap 1771366 ATATTCTAAATTTAG CGTCAATACGTC AATT GACGTACAGACA TTTTTTATTTAAATA TERM 2061 1771500 - 1771455 - f 91 -4.6 -5.78622 | gap 1, opp_overlap 1771445 1771455 TCATTTTAAAAAAAA TATTTTATTATTATTTTTAAT TAATT ATTAAAAA-AATTATAAAATA TTAAGTATATGTTTT ACIAD1765 1771665 - 1772951 + | branched-chain amino acid ABC transporter periplasmic substrate-binding protein ACIAD1766 1773033 - 1774679 + | branched chain amino acid ABC transporter permease TERM 2062 1774719 - 1774744 + G 73 -5.5 -4.6265 | overlap 1774721 TTTTCTGATAAACCC TATAGTGCTGT ACTC ATAGCGCTATG TTTTCTGGTTGTTAT ACIAD1767 1774686 - 1775756 + | branched chain amino acid ABC transporter permease ACIAD1768 1775757 - 1776584 + | branched-chain amino acid ABC transporter ATP-binding protein ACIAD1769 1776594 - 1777292 + | branched-chain amino acid ABC transporter ATP-binding protein TERM 2063 1777380 - 1777351 - f 81 -10.9 -2.90751 | opp_overlap 1777356, overlap 1777322 1777356 TTTAATAATTCAAAT GAAAACTGCCATT TCTT AATGGCAGTTTTT TTGAATAAAAATAAA TERM 2064 1777356 - 1777375 + F 100 -10.8 -5.47218 | opp_overlap 1777351 1777356 TAATTCAAATGAAAA CTGCCATT TCTT AATGGCAG TTTTTTTGAATAAAA TERM 2065 1777375 - 1777356 - f 100 -10.8 -4.5852 | opp_overlap 1777356, overlap 1777351 TAATTCAAATGAAAA CTGCCATT TCTT AATGGCAG TTTTTTTGAATAAAA ACIAD1770 1777596 - 1777790 + | hypothetical protein ACIAD1771 1777821 - 1778144 + | hypothetical protein TERM 2066 1778314 - 1778277 - T 73 -7.9 -3.74626 | gap 1, opp_overlap 1778284, overlap 1778279 1778284 ATTAAATGATTCAAA TAGTAGAGCTCTCAATCA CTA TGATTGAGAGCTTTTC-A GATTATTTACTTTTA TERM 2067 1778313 - 1778279 - T 93 -13 -3.44924 | opp_overlap 1778284, overlap 1778277 1778284 TAAATGATTCAAATA GTAGAGCTCTCAATCA CTA TGATTGAGAGCTTTTC AGATTATTTACTTTT TERM 2068 1778308 - 1778284 - T 100 -15.9 -2.97735 | opp_overlap 1778284, overlap 1778279 1778277 GATTCAAATAGTAGA GCTCTCAATCA CTA TGATTGAGAGC TTTTCAGATTATTTA TERM 2069 1778284 - 1778308 + T 100 -15.9 -4.2573 | opp_overlap 1778279 1778277 1778284 GATTCAAATAGTAGA GCTCTCAATCA CTA TGATTGAGAGC TTTTCAGATTATTTA ACIAD1772 1778766 - 1778317 - | putative signal peptide TERM 2070 1779141 - 1779100 - H 71 -7.5 -3.70331 | gap 2, opp_overlap 1779100, overlap 1779091 1779098 AATTTAGCCAAAATA GCCCTCACC--ATCTTTAG CACATT CTAAAGATCCGGTGGGGGC TTTTGCATGGAATGC TERM 2071 1779100 - 1779141 + H 93 -9.7 -4.1899 | gap 2, opp_overlap 1779091 1779098 1779100 AATTTAGCCAAAATA GCCCTCACC--ATCTTTAG CACATT CTAAAGATCCGGTGGGGGC TTTTGCATGGAATGC ACIAD1773 1779134 - 1780402 + | putative transport protein (permease) TERM 2072 1780457 - 1780423 - T 87 -11.6 -3.1978 | opp_overlap 1780417, overlap 1780421 ATCTTTATATGAATA GCTTCATCGCTTAT GAAAAAT ATGAGCGATGAAGC ATAATAACAATTAGA otsA 1781904 - 1780468 - | trehalose-6-phosphate synthase TERM 2073 1781451 - 1781399 - G 74 -9.3 -3.28791 | opp_overlap 1781399 1781398, overlap 1781403 AGCTGCTCTGCACAA GGAATCTTTCTCCATATTTCCAGTG AGG CAAAAGGAATATGAAGAAAGAATCC GATTTTATTTTGCAT otsB 1782760 - 1781897 - | trehalose-6-phosphate phophatase, biosynthetic TERM 2074 1782028 - 1782008 - G 84 -9.8 -3.75332 | ATTTTTCAATCTAAA TCTGGCAA CTGTT TTGCCAGA TCCAACCTTAATACT TERM 2075 1783346 - 1783331 - g 71 -9 -3.2703 | overlap 1783326 AAATAATCAAGTGAA TGTGGC CTAT GCCACA TCATCCAATGATTAT ACIAD1776 1783137 - 1783610 + | putative general stress protein 26 TERM 2076 1783640 - 1783668 + F 93 -13.3 -3.51137 | ACTCCAGATGTTTAA GTGCTACACATTT TTT GGATGTGTAGCAC TTGTATAGAATGATT TERM 2077 1784071 - 1784085 + F 77 -5.8 -4.72188 | opp_overlap 1784071 1784069 AAATCTAAAATAATA TGATAA TAA TTATCA TTTGTTTTGACTTGA fecI 1784139 - 1784624 + | alternative RNAP sigma factor required for fecA promoter recognition and ferric citrate transport; activated by FecR fecR 1784618 - 1785559 + | membrane bound regulator in multi-component regulatory system with cytoplasmic FecI (sigma factor) and FecA (outer membrane receptor) TERM 2078 1786185 - 1786195 + G 73 -5.4 -4.7219 | opp_overlap 1786185 GAAATAAATCAATAC TGGA TAC TCCA TTTTCTATTGCTGTG ACIAD1780 1785641 - 1788112 + | putative tonB-dependent ferric siderophore receptor protein TERM 2079 1788122 - 1788151 + F 93 -9.5 -4.36433 | opp_overlap 1788122 TGGTAAAATGGATAA TATGGCAAGATAT TTTA ATGTCTTGCTATA TTTATTGATATTTAG TERM 2080 1788322 - 1788309 - g 75 -2.3 -5.40072 | GGTTGTGCAAAAAAA GACGA TAAG CCGCC CCAAACAGCATCCAA ACIAD1781 1788246 - 1789061 + | hypothetical protein TERM 2081 1790459 - 1790438 - g 86 -3 -5.60864 | opp_overlap 1790438, overlap 1790441 GAGATATTAAAAAAA GAAGATGT GTTACT ACATCATC CTTTTGACTCATTTG TERM 2082 1791046 - 1791031 - g 70 -7.6 -3.5861 | ATCGATAATAATTAA GGTCAA TGCA TTGACC GAGCCACAGTTAATT ppk 1789403 - 1791484 + | polyphosphate kinase TERM 2083 1792219 - 1792259 + G 72 -7.7 -3.85698 | opp_overlap 1792221, overlap 1792221 ATTTTCTCATTACAC AACTTGGGTTTGATGTAGA GTG TTTACAACAGACTCAAGTA TTTCTACAAAAAAAC TERM 2084 1792221 - 1792257 + G 80 -10.3 -3.51934 | opp_overlap 1792221, overlap 1792219 TTTCTCATTACACAA CTTGGGTTTGATGTAGA GTG TTTACAACAGACTCAAG TATTTCTACAAAAAA TERM 2085 1792691 - 1792707 + G 70 -9.5 -2.79579 | opp_overlap 1792691, overlap 1792690 1792693 1792695 TTTGAAATACAAAAA GATGCAT ACG ATGCATC GTATGTTTTTTGAGT TERM 2086 1792707 - 1792691 - g 100 -9.5 -5.19879 | opp_overlap 1792690 1792691 1792693 1792695 TTTGAAATACAAAAA GATGCAT ACG ATGCATC GTATGTTTTTTGAGT TERM 2087 1792695 - 1792712 + G 100 -8.5 -5.08824 | opp_overlap 1792691, overlap 1792693 1792691 1792690 AAATACAAAAAGATG CATACGA TGCA TCGTATG TTTTTTGAGTCAAAA ACIAD1783 1791699 - 1793105 + | putative methylenetetrahydrofolate reductase ACIAD1784 1793654 - 1793196 - | hypothetical protein ACIAD1786 1794191 - 1794415 + | fragment of transposase csp 1794597 - 1794809 + | cold shock-like protein TERM 2088 1794833 - 1794816 - f 74 -5.7 -4.67123 | opp_overlap 1794815, overlap 1794811 1794810 GTAAAATAAGTAAAA CTTTAAA AAGT TTTAAAG CCTTATATTTTAAAA TERM 2089 1794833 - 1794856 + F 100 -11.2 -5.61596 | opp_overlap 1794833, overlap 1794815 TTAAAAAGTTTTAAA GCCTTATATT TTAA AATATAAGGC TTTTTTTATGAAAAT TERM 2090 1794856 - 1794833 - f 90 -11.2 -3.68853 | opp_overlap 1794815 1794833 TTAAAAAGTTTTAAA GCCTTATATT TTAA AATATAAGGC TTTTTTTATGAAAAT ACIAD1788 1794984 - 1797608 + | putative VGR-like protein ACIAD1789 1797605 - 1798288 + | hypothetical protein ACIAD1790 1798278 - 1799639 + | hypothetical protein ACIAD1791 1800464 - 1799607 - | IS1236 transposase protein 2 TERM 2091 1800366 - 1800383 + g 76 -7.7 -4.07885 | ATCATTATATTTCTG CGCTAGA TTGG TCTGGCG TTTTCGCCAGGCATA ACIAD1792 1800781 - 1800473 - | IS1236 transposase protein 1 ACIAD1794 1800814 - 1802439 + | hypothetical protein TERM 2092 1803012 - 1803029 + G 77 -4.9 -5.00616 | GGATAATATTGTAGA GGAAGAA ATTA TTTTTCC TTTTTTAGCACCAAG ACIAD1795 1802446 - 1803534 + | hypothetical protein TERM 2093 1804344 - 1804393 + G 75 -5.9 -4.63486 | gap 1, opp_overlap 1804322 1804334 1804353 1804356 1804357, overlap 1804357 1804363 GCAAACCCGCCCTGC TGAACGAGA-TAATGGAATAGCAA CAG TTGCTTTTCCTTTATTCTCACTCA TTTTATTAAGACGCT TERM 2094 1804357 - 1804379 + G 88 -9.2 -4.33819 | opp_overlap 1804356 1804353 1804357, overlap 1804344 1804363 GCTGAACGAGATAAT GGAATAGCAA CAG TTGCTTTTCC TTTATTCTCACTCAT TERM 2095 1804379 - 1804357 - g 70 -9.2 -2.75647 | opp_overlap 1804357 1804344 1804363, overlap 1804356 1804353 GCTGAACGAGATAAT GGAATAGCAA CAG TTGCTTTTCC TTTATTCTCACTCAT TERM 2096 1804363 - 1804373 + G 73 -5.4 -4.70353 | opp_overlap 1804357 1804356 1804353, overlap 1804357 1804344 CGAGATAATGGAATA GCAA CAG TTGC TTTTCCTTTATTCTC ACIAD1796 1803547 - 1804635 + | hypothetical protein TERM 2097 1804737 - 1804722 - f 71 -3.2 -5.08088 | overlap 1804724 AATTCCGAATAAAAA TGGACG CTTA CGTCTA AGAGAACCTAAACTG TERM 2098 1805485 - 1805495 + G 73 -8.2 -3.64049 | TTCTTTTTTTATGAT GCCG CTT CGGC TTTGGGAATTCTTGA TERM 2099 1806383 - 1806371 - g 75 -3.4 -5.12707 | TTAAATCCTAAAAAA CTAG ACCGA CTAG CTGAATTGGCTAATC ACIAD1798 1804946 - 1806739 + | putative lipopolysaccharide modification acyltransferase ACIAD1799 1806881 - 1807084 + | hypothetical protein TERM 2100 1807108 - 1807126 + T 84 -8.2 -4.49556 | opp_overlap 1807108 TGTTAATCCTAAAAA GTCCAATT GAT GATTGGAC TTTATTTCATCAAGA TERM 2101 1807126 - 1807108 - T 83 -7.5 -4.66833 | opp_overlap 1807108 TGTTAATCCTAAAAA GTCCAAT TGATG ATTGGAC TTTATTTCATCAAGA ACIAD1800 1808064 - 1807210 - | formate/nitrate transporter ACIAD1801 1808407 - 1809738 + | hypothetical protein TERM 2102 1809871 - 1809848 - g 80 -2.5 -5.49234 | gap 1, overlap 1809850 1809852 ACATTTAAGAAAAAA TATTC-TGGG CTTGT CCCAAGAACA GTATGCAACTTTGGT ACIAD1802 1809723 - 1810052 + | putative transcriptional regulator ACIAD1803 1810778 - 1810056 - | hypothetical protein TERM 2103 1810237 - 1810225 - G 82 -2 -5.58454 | overlap 1810226 TGCAGATCAAAAAAA TTCT CTTCT AGAA ACTTTTCAAAGTCAT TERM 2104 1811018 - 1811001 - R 78 -7.7 -4.26871 | opp_overlap 1811001 TAATTTATTAATAAA GCCCTCT ATAA AGAAGGC TTTTTATCGCTTCAA TERM 2105 1811001 - 1811018 + r 77 -5.5 -4.91712 | opp_overlap 1811001 TAATTTATTAATAAA GCCCTCT ATAA AGAAGGC TTTTTATCGCTTCAA ACIAD1804 1812223 - 1811060 - | major facilitator superfamily permease TERM 2106 1812318 - 1812370 + H 83 -8.2 -4.39386 | gap 2, opp_overlap 1812323 1812325 1812326, overlap 1812318 1812321 1812323 1812323 GAATAAAAGATAAAA TA-AAATAT-GTTGATGTGTCAACAA TAA TTGTTGACACATCAACTAAATCTGTA TTTTAATAATTTCAG TERM 2107 1812318 - 1812368 + H 81 -9.2 -3.79533 | opp_overlap 1812323 1812325 1812326, overlap 1812318 1812321 1812323 1812323 GAATAAAAGATAAAA TAAAATATGTTGATGTGTCAACAA TAA TTGTTGACACATCAACTAAATCTG TATTTTAATAATTTC TERM 2108 1812321 - 1812366 + H 89 -11.5 -3.46345 | gap 1, opp_overlap 1812323 1812325 1812326, overlap 1812318 1812318 1812323 1812323 TAAAAGATAAAATAA AATAT-GTTGATGTGTCAACAA TAA TTGTTGACACATCAACTAAATC TGTATTTTAATAATT TERM 2109 1812323 - 1812363 + H 100 -15.7 -2.56656 | opp_overlap 1812323 1812325 1812326, overlap 1812321 1812318 1812318 1812323 AAAGATAAAATAAAA TATGTTGATGTGTCAACAA TAA TTGTTGACACATCAACTAA ATCTGTATTTTAATA TERM 2110 1812362 - 1812323 - H 100 -17.6 -5.2894 | gap 1, opp_overlap 1812323 1812323 1812321 1812318 1812318, overlap 1812325 1812326 AAAGATAAAATAAAA TATGTTGATGTGTCAACAA TAA TTGTTGACACATCAAC-TA AATCTGTATTTTAAT TERM 2111 1812323 - 1812364 + H 95 -14.1 -3.28966 | gap 1, opp_overlap 1812323 1812325 1812326, overlap 1812323 1812321 1812318 1812318 AAAGATAAAATAAAA TAT-GTTGATGTGTCAACAA TAA TTGTTGACACATCAACTAAA TCTGTATTTTAATAA TERM 2112 1812361 - 1812325 - H 100 -18.3 -4.22673 | opp_overlap 1812323 1812323 1812321 1812318 1812318, overlap 1812323 1812326 AGATAAAATAAAATA TGTTGATGTGTCAACAA TAA TTGTTGACACATCAACT AAATCTGTATTTTAA TERM 2113 1812360 - 1812326 - H 100 -21.8 -3.11164 | opp_overlap 1812323 1812323 1812321 1812318 1812318, overlap 1812325 1812323 GATAAAATAAAATAT GTTGATGTGTCAACAA TAA TTGTTGACACATCAAC TAAATCTGTATTTTA ACIAD1805 1812442 - 1813371 + | glyoxalase TERM 2114 1813558 - 1813545 - g 70 -3.9 -4.87626 | CTGGAATATCAAAAA GATAA GTTT TTATC AGCTGATGGAAAACA ACIAD1806 1813371 - 1813730 + | ferredoxin TERM 2115 1814648 - 1814684 + G 71 -2.2 -5.14563 | opp_overlap 1814637 1814646 1814648 1814649, overlap 1814649 AAATTGCAGAGAATA TGCACCTCAATGGAGT GCTTG ACCGCATTAAGGTGCC TTTTTTAGTGACGCA TERM 2116 1814683 - 1814649 - g 71 -10.1 -2.59565 | opp_overlap 1814649 1814648, overlap 1814637 1814648 1814646 AATTGCAGAGAATAT GCACCTCAATGGAGT GCTTG ACCGCATTAAGGTGC CTTTTTTAGTGACGC ACIAD1807 1813741 - 1814901 + | putative dipeptidyl aminopeptidase/acylaminoacyl-peptidase TERM 2117 1815029 - 1815002 - g 100 -13 -5.03145 | GAAGCTTGGAAAAAA CGTATCTTTAAT TGAA ATTAAAGATACG CTCAAGCCAATAGGC TERM 2118 1815584 - 1815601 + G 71 -4.9 -4.63218 | opp_overlap 1815584 TATGTGCGTACTAGA TCATCGT GAGA ATGATGA TTTTATTGAACCGCA ACIAD1808 1814916 - 1816058 + | hypothetical protein TERM 2119 1816718 - 1816696 - g 83 -11.4 -3.05384 | TTTGGTTTTATTCAA GCAAAAACCG CCA CGATTTTTGC GCCAGTTGCAGTAAC ACIAD1809 1816129 - 1817106 + | putative fumarylacetoacetate hydrolase ACIAD1810 1817287 - 1817514 + | hypothetical protein ACIAD1811 1818026 - 1817589 - | MarR/EmrR family transcriptional regulator TERM 2120 1817648 - 1817675 + g 84 -6.4 -5.04597 | opp_overlap 1817636 1817634, overlap 1817636 ATAGCTGATCTTTTT CAGCTTCTTCAA ACTC TTCAAGAAGTTG TTTTTCTCTCTCAAT TERM 2121 1818078 - 1818117 + r 75 -9.6 -2.60794 | opp_overlap 1818078, overlap 1818077 1818076 TACAGAATCAACAAA TTAAGGATATATTTAACT TTGT AGAAAAATATATCCTTAA CATTTATCTTTTTTA TERM 2122 1818117 - 1818078 - R 100 -9.6 -4.38203 | opp_overlap 1818078 1818077 1818076 TACAGAATCAACAAA TTAAGGATATATTTAACT TTGT AGAAAAATATATCCTTAA CATTTATCTTTTTTA ACIAD1812 1818924 - 1818139 - | putative cyclase ACIAD1813 1819884 - 1818955 - | putative signal peptide TERM 2123 1820092 - 1820125 + H 100 -17.1 -3.32993 | opp_overlap 1820092, overlap 1820098 CGAAAACTTATTAAA TACCAATATTGTTGA TGTG TCAACAATATTGGTA TTGATGTCTAAATAG TERM 2124 1820125 - 1820092 - H 100 -17.1 -3.84284 | opp_overlap 1820092 1820098 CGAAAACTTATTAAA TACCAATATTGTTGA TGTG TCAACAATATTGGTA TTGATGTCTAAATAG TERM 2125 1820098 - 1820119 + H 75 -8.9 -3.41309 | opp_overlap 1820092, overlap 1820092 CTTATTAAATACCAA TATTGTTGA TGTG TCAACAATA TTGGTATTGATGTCT TERM 2126 1820389 - 1820399 + G 95 -4.6 -5.77571 | CAATGTTTAAGTATT CGTG TTT CGCG TTTTTATTTTTTAAT ACIAD1814 1820367 - 1821236 + | putative signal peptide TERM 2127 1821802 - 1821790 - g 78 -5.5 -5.0133 | TATTCTCCCAAAAAA TCGCG TGT CACGA TGGTCAGTATCATGT ACIAD1815 1821361 - 1822713 + | MFS superfamily benzoate transport protein TERM 2128 1822767 - 1822724 - T 86 -12.8 -2.80651 | opp_overlap 1822737, overlap 1822737 AATAATACAAAAACG TTTAAATAAAAAAGCTGAAG ACGA CTTCAGCTTTTTTATTTTGA ATTAAAATACATGAT TERM 2129 1822737 - 1822754 + T 100 -9.9 -5.80951 | opp_overlap 1822724 1822737 CGTTTAAATAAAAAA GCTGAAG ACGA CTTCAGC TTTTTTATTTTGAAT TERM 2130 1822754 - 1822737 - T 100 -9.9 -5.63517 | opp_overlap 1822737, overlap 1822724 CGTTTAAATAAAAAA GCTGAAG ACGA CTTCAGC TTTTTTATTTTGAAT ACIAD1816 1823329 - 1822769 - | hypothetical protein TERM 2131 1822846 - 1822864 + g 72 -9.6 -3.17392 | opp_overlap 1822849, overlap 1822849 AATGTTTCGCTTTAT CAATCCGC ATT GTGGATTG TTCACTTACCCAATC TERM 2132 1823389 - 1823400 + H 72 -5.8 -4.41895 | AATATCGGACGATTT GAGC ACAA GCTC TTTTACTTAAAAATT ACIAD1817 1823583 - 1824239 + | AraC family transcriptional regulator TERM 2133 1824269 - 1824298 + F 88 -5.8 -5.60689 | opp_overlap 1824270, overlap 1824270 TAATGTTTAAATATA ACTCACGATTTT AAATCA AGAATCGTGAGG TTTTTTATTATCTAA TERM 2134 1824270 - 1824297 + F 85 -9.3 -3.94787 | opp_overlap 1824270, overlap 1824269 AATGTTTAAATATAA CTCACGATTTT AAATCA AGAATCGTGAG GTTTTTTATTATCTA TERM 2135 1824297 - 1824270 - f 70 -7.2 -3.82603 | gap 1, opp_overlap 1824269 1824270 AATGTTTAAATATAA CTCACGATT-TTA AAT CAAGAATCGTGAG GTTTTTTATTATCTA alkK 1824526 - 1826163 + | medium-chain-fatty-acid-CoA ligase ACIAD1819 1826187 - 1827290 + | putative acyl-CoA dehydrogenase ACIAD1820 1827314 - 1828090 + | enoyl-CoA hydratase ACIAD1821 1828090 - 1829238 + | putative acyl-CoA dehydrogenase TERM 2136 1829243 - 1829283 + T 84 -12 -2.73854 | gap 1, opp_overlap 1829242, overlap 1829239 1829240 AATTGCCTTAACCAT TCA-TTCATGCCCATTCGC ATCA GCGTATGGGCATGAAATGC TGATGTACTTTAGTG ACIAD1822 1830072 - 1829293 - | putative transcriptional regulator TERM 2137 1830685 - 1830699 + G 72 -10 -2.75022 | overlap 1830684 CCGTCCTCTGTATTG GCCATG CGT CATGGC GTTATGTATAGCGCC ACIAD1824 1830244 - 1830999 + | putative oxidoreductase, short-chain dehydrogenase/reductase TERM 2138 1831678 - 1831665 - g 81 -5.3 -5.14563 | GTCTCGATCAAAAAA TTCGT GCCT ACGAA TATGGCGATGGTAAC ACIAD1825 1831163 - 1832056 + | putative transcriptional regulator; putative regucalcin family protein TERM 2139 1833070 - 1833108 + G 80 -10.3 -3.52093 | opp_overlap 1833077 1833091 TGATGTAGCGCCAAT GCCAGAAGCTGCGCAAG ATGAG CTTAAGCAGCTTCTGCC TTATGCTTCCCCTGT pauA 1832066 - 1834171 + | pimeloyl-CoA synthetase TERM 2140 1834220 - 1834188 - g 72 -9.9 -2.84126 | opp_overlap 1834187 1834191, overlap 1834187 1834191 1834207 TCATAAATGTGAAAC TCATGTGCAACTCAC GAA ATGCGTTGCACATGC CTTATAAACAAGCCA TERM 2141 1834217 - 1834191 - g 74 -10.2 -2.6704 | opp_overlap 1834187 1834191, overlap 1834188 1834187 1834207 TAAATGTGAAACTCA TGTGCAACTCAC GAA ATGCGTTGCACA TGCCTTATAAACAAG TERM 2142 1834684 - 1834696 + G 74 -7.7 -3.94404 | opp_overlap 1834682 1834683 TCCAATTTTAAAAGG TGCTG TTG CAGCA TTTGATTGCGTGGTT ACIAD1827 1834181 - 1834837 + | putative flavoprotein oxidoreductase ACIAD1828 1834859 - 1836451 + | short chain dehydrogenase TERM 2143 1837103 - 1837146 + G 73 -8.2 -3.65812 | gap 1, overlap 1837105 GTGTGCTGTCAATGG TGTCGC-TGCCGGAGCAGG CGTAGGA CTTGCACTGGCATGCGATA TTGTATTAGCAGCAG TERM 2144 1837105 - 1837144 + G 71 -8.6 -3.41024 | gap 1, overlap 1837103 GTGCTGTCAATGGTG TCGC-TGCCGGAGCAGG CGTAGGA CTTGCACTGGCATGCGA TATTGTATTAGCAGC ACIAD1829 1836465 - 1837568 + | putative enoyl-CoA hydratase (PaaG-like) TERM 2145 1837750 - 1837739 - f 76 -4.4 -5.03314 | opp_overlap 1837739 1837739 TTCAGCCTTAAAAAA CAAC AAGA GTTG TAGATTCGTTTTACA TERM 2146 1838166 - 1838176 + G 71 -6.8 -4.12902 | CAAATGTGAGTGATG CACC TGC GGTG TTTTCAGAATACTTA ACIAD1830 1837793 - 1838863 + | putative monooxygenase TERM 2147 1838882 - 1838901 + T 93 -7.9 -5.44721 | AGACTGTTCCTCTTG TGCCGAT ACTCCC ATCGGCA TTTTTTTCGAATGGT ACIAD1831 1839816 - 1839058 - | hypothetical protein TERM 2148 1839830 - 1839849 + r 73 -8 -3.60798 | opp_overlap 1839834 1839839, overlap 1839827 ATTCTTTTTTTTCAA TTTAGAGT ATTT ACTCTAAA TTAGTTTGTACAGAT ACIAD1832 1840264 - 1840028 - | hypothetical protein ACIAD1834 1840870 - 1841769 + | AraC family transcriptional regulator ACIAD1835 1841924 - 1842838 + | hypothetical protein TERM 2149 1842853 - 1842870 + F 100 -9.1 -5.41746 | opp_overlap 1842853 ATTGAATTAAAAAAA TCGGGGC AATA GTCCCGA TTTTTTTACGCCGTT TERM 2150 1842870 - 1842853 - f 93 -6.9 -5.64006 | opp_overlap 1842853 ATTGAATTAAAAAAA TCGGGGC AATA GTCCCGA TTTTTTTACGCCGTT ACIAD1836 1843016 - 1844167 + | putative oxidoreductase (NADH-dependent flavin oxidoreductase) ACIAD1837 1844196 - 1844357 + | hypothetical protein TERM 2151 1844597 - 1844576 - g 76 -2.9 -5.37171 | AATATCAAAGAAAAA GTACAGCCA TCAT TTGCGGTAC AGCCTATTGATTATG ACIAD1838 1844348 - 1845091 + | AraC family transcriptional regulator TERM 2152 1845439 - 1845455 + G 74 -8.1 -3.95787 | opp_overlap 1845438 1845439 1845441 AGGACAAAAAGAAGT CATTATC GGA GATAATG TTTATCAGTGTCATG ACIAD1839 1845239 - 1845898 + | AraC family transcriptional regulator ACIAD1840 1845891 - 1846157 + | AraC family transcriptional regulator TERM 2153 1846505 - 1846488 - f 70 -4.2 -4.7033 | CAATTTAACATAAAA TGAAGT TATGCG ACTTCA GAATGATTATAGAGA ACIAD1841 1846495 - 1846911 + | hypothetical protein TERM 2154 1847119 - 1847099 - g 73 -2.6 -5.20783 | opp_overlap 1847113 ATGCAAATAGAAAAA TTACAGCA GGGTT TGTTGTAA AAACGACTTATACTC ACIAD1842 1846915 - 1847328 + | hypothetical protein TERM 2155 1847371 - 1847347 - T 88 -7.2 -5.1287 | opp_overlap 1847347 TTGACACTCAAAAAA GAGTCCAC TTTTTAATG GTGGACTC TTATCATTTTTACAT TERM 2156 1847347 - 1847371 + T 81 -9.3 -3.76107 | opp_overlap 1847347 TTGACACTCAAAAAA GAGTCCACTTT TTA ATGGTGGACTC TTATCATTTTTACAT TERM 2157 1847474 - 1847436 - T 79 -5.7 -5.10077 | opp_overlap 1847442, overlap 1847412 1847441 1847442 1847448 AAAGATTTCAAAAAA CAAAATTATATA-TCTTGC ATT GCAAGACTATATA-TCTTG TATATCCAATATATA TERM 2158 1847470 - 1847441 - T 82 -4.5 -5.42198 | gap 1, opp_overlap 1847442, overlap 1847436 1847442 1847448 TTTCAAAAAACAAAA TTATATA-TCTTGC ATT GCAAGACTATATAT CTTGTATATCCAATA TERM 2159 1847469 - 1847442 - T 75 -8 -3.83692 | gap 1, opp_overlap 1847442, overlap 1847441 1847436 1847448 TTCAAAAAACAAAAT TATATA-TCTTGC ATT GCAAGACTATATA TCTTGTATATCCAAT TERM 2160 1847442 - 1847469 + T 72 -8 -3.37466 | gap 1, opp_overlap 1847441 1847436 1847442 1847448 TTCAAAAAACAAAAT TATATA-TCTTGC ATT GCAAGACTATATA TCTTGTATATCCAAT TERM 2161 1847462 - 1847448 - T 73 -8.6 -3.15231 | opp_overlap 1847442, overlap 1847442 1847441 1847436 AAACAAAATTATATA TCTTGC ATT GCAAGA CTATATATCTTGTAT ACIAD1843 1847783 - 1847589 - | hypothetical protein ACIAD1844 1847896 - 1848144 + | hypothetical protein ACIAD1845 1848146 - 1848571 + | hypothetical protein TERM 2162 1848672 - 1848630 - T 95 -14.5 -2.82635 | gap 1, opp_overlap 1848620 1848638, overlap 1848638 ATGTTCATTAGGATA CTCAGTAACGTGATG-TATA ATCG TAGATCATCACGTTACTGAG CTGTAGCTGCAAACA TERM 2163 1848756 - 1848780 + T 100 -10.2 -4.27465 | overlap 1848753 CGAATCTATGTATTG TAAGTCATTG ATATA CAATGACTTA TTGTTTTAAATTATC ACIAD1846 1849100 - 1848786 - | hypothetical protein ACIAD1847 1850263 - 1849100 - | putative phage replication initiation factor TERM 2164 1849372 - 1849358 - G 81 -4.2 -5.28176 | overlap 1849359 TGCAGCTATAAAAAA CTCGCT TGG AGCTAG CAACATATCGAACGG ACIAD1848 1850544 - 1850257 - | hypothetical protein ACIAD1849 1850597 - 1850794 + | hypothetical protein TERM 2165 1850834 - 1850814 - f 100 -9.8 -4.62669 | opp_overlap 1850814 TAATTAAAGAATAAA TCGAGTAG CAACC CTACTCGA TATTAAAATTTAGGT TERM 2166 1850814 - 1850834 + F 77 -9.8 -3.12936 | opp_overlap 1850814 TAATTAAAGAATAAA TCGAGTAG CAACC CTACTCGA TATTAAAATTTAGGT ACIAD1850 1850856 - 1851110 + | hypothetical protein ACIAD1851 1851824 - 1851678 - | hypothetical protein ACIAD1852 1853137 - 1851833 - | putative phage-related protein ACIAD1853 1853412 - 1853134 - | putative phage-related protein TERM 2167 1853454 - 1853440 - R 75 -8.6 -3.40597 | overlap 1853438 CGTCCCATCCAAACA CCTGAT GCG ATCAGG AATGCCATGATGGCG ACIAD1854 1854824 - 1853415 - | putative phage-related protein TERM 2168 1854942 - 1854919 - R 100 -10.4 -4.61199 | opp_overlap 1854919 ACCTCATATAGAAAA CCTACCCATA CGAA TATGAGTAGG TAATTGGAATCAGCG ACIAD1855 1855221 - 1854952 - | hypothetical protein ACIAD1856 1855580 - 1855416 - | hypothetical protein TERM 2169 1855802 - 1855826 + r 100 -10.2 -4.27465 | overlap 1855799 CGAATCTATGTATTG TAAGTCATTG ATATA CAATGACTTA TTGTTTTAAATTATC ACIAD1857 1856146 - 1855832 - | hypothetical protein ACIAD1858 1857309 - 1856146 - | putative phage replication initiation factor TERM 2170 1856418 - 1856404 - G 81 -4.2 -5.28176 | overlap 1856405 TGCAGCTATAAAAAA CTCGCT TGG AGCTAG CAACATATCGAACGG ACIAD1859 1857590 - 1857303 - | hypothetical protein ACIAD1860 1857643 - 1857840 + | hypothetical protein TERM 2171 1857880 - 1857860 - f 100 -9.8 -4.62669 | opp_overlap 1857860 TAATTAAAGAATAAA TCGAGTAG CAACC CTACTCGA TATTAAAATTTAGGT TERM 2172 1857860 - 1857880 + F 77 -9.8 -3.12936 | opp_overlap 1857860 TAATTAAAGAATAAA TCGAGTAG CAACC CTACTCGA TATTAAAATTTAGGT ACIAD1861 1857902 - 1858156 + | hypothetical protein TERM 2173 1858361 - 1858335 - T 83 -8.3 -4.30987 | opp_overlap 1858336 ATGTGCCACAAGAAA TTGATTATTAA TCATT TTAATAATCAA CATTATCTAAATCTC ACIAD1862 1859210 - 1858368 - | hypothetical protein ACIAD1864 1859557 - 1860123 + | TetR family transcriptional regulator TERM 2174 1860180 - 1860215 + F 100 -15.8 -3.1355 | CGTCTGAAGTCCTCT TTACTGACCATTAAAA TTAC TTTTGATGGTCAGTAA TTACATGTAAATGAA ACIAD1865 1860447 - 1860755 + | ArsR family transcriptional regulator sstT 1860954 - 1862153 + | serine/threonine transporter SstT ACIAD1867 1862192 - 1862866 + | hypothetical protein ACIAD1868 1862882 - 1863418 + | putative nucleoprotein/polynucleotide-associated enzyme TERM 2175 1863507 - 1863562 + F 71 -3.4 -5.10029 | overlap 1863514 1863559 AAATAATATATTGAT TCTTAAGCCTTTACACTTATCACAAT TTTA AATATGAAAGGTGTAGAGGTTTTGGA TTTTTTAAAATTCAT TERM 2176 1863978 - 1863999 + G 75 -3.1 -5.24796 | gap 1, overlap 1863980 1863981 CCGATTAAGGGCTAT TTA-CAGCTT GTT AAGCTGATGA TTTTTATTGTCTGCG ACIAD1869 1863540 - 1864820 + | putative transporter with mechanosensitive ion channel ACIAD1870 1866008 - 1864845 - | MFS superfamily metabolite transporter TERM 2177 1865702 - 1865692 - G 87 -5.4 -5.42259 | GCATTTTGAAAAAAA CTGA AAA TCAG CATTAATAATGCAAT TERM 2178 1866313 - 1866323 + H 84 -4 -5.68039 | ACAGATGTTCAAACT GAAT GAC ATTC TTTTTTTATACGTTT TERM 2179 1866732 - 1866758 + G 75 -3 -5.22481 | overlap 1866734 AACACAATCTTATTC TTTTGGCGAGTG TAC TATTTGCCAATA TTTTCTTTGTTTGTC TERM 2180 1867421 - 1867389 - g 73 -8.5 -3.73534 | opp_overlap 1867388 TAATTGCAGCAACAA CAGCCATGATTTTAA AAC TTAATAGCATGGCCG AATTCATGATGTGGC ACIAD1873 1866473 - 1868323 + | ABC transporter ATP-binding protein ACIAD1874 1868323 - 1868769 + | putative dehydratase TERM 2181 1868780 - 1868790 + F 90 -4 -5.94743 | TGTAGAGATATCGCT TTGT CTA ACAA TTTTTATTTTTTTTA ACIAD1875 1868839 - 1869897 + | AraC family transcriptional regulator gcvH 1869968 - 1870342 + | glycine cleavage complex protein H, carrier of aminomethyl moiety via covalently bound lipoyl cofactor TERM 2182 1870351 - 1870375 + T 100 -10.8 -4.17089 | opp_overlap 1870348 TTTATAAAAGATGTA CTCTCCCTTA TGATT TGAGGGAGAG TTTTAGCGCTTTAAG aro 1871441 - 1870386 - | phospho-2-dehydro-3-deoxyheptonate aldolase TERM 2183 1871614 - 1871640 + r 86 -10.9 -3.20723 | opp_overlap 1871616, overlap 1871616 1871625 AAACAGACATAAAAA AACCTGATCGG GGTTG CCGATCAGGTA TTAACTTGATGGGCA TERM 2184 1871638 - 1871616 - R 100 -13.5 -5.77988 | opp_overlap 1871614 1871616 1871625 ACAGACATAAAAAAA CCTGATCGG GGTTG CCGATCAGG TATTAACTTGATGGG TERM 2185 1871616 - 1871638 + r 93 -13.5 -3.16676 | opp_overlap 1871616, overlap 1871614 1871625 ACAGACATAAAAAAA CCTGATCGG GGTTG CCGATCAGG TATTAACTTGATGGG TERM 2186 1871625 - 1871658 + r 100 -14.7 -5.06414 | opp_overlap 1871616, overlap 1871616 1871614 AAAAAACCTGATCGG GGTTGCCGATCAGGT ATTA ACTTGATGGGCAACC TTTTTGTTGCCCGAA TERM 2187 1871957 - 1871916 - R 70 -8.2 -3.28924 | gap 1, opp_overlap 1871923, overlap 1871918 1871919 1871923 GATGCTCTTTCATAA GATTGAACATCTCAGTGAC CACTC GTCCCTGAGATGTTCA-TA AATAAAAATCAGGAT TERM 2188 1871956 - 1871918 - R 91 -13.3 -3.21276 | opp_overlap 1871923, overlap 1871916 1871919 1871923 TGCTCTTTCATAAGA TTGAACATCTCAGTGAC CACTC GTCCCTGAGATGTTCAT AAATAAAAATCAGGA TERM 2189 1871955 - 1871919 - R 100 -16.8 -2.52623 | opp_overlap 1871923, overlap 1871918 1871916 1871923 GCTCTTTCATAAGAT TGAACATCTCAGTGAC CACTC GTCCCTGAGATGTTCA TAAATAAAAATCAGG TERM 2190 1871951 - 1871923 - R 89 -11.8 -3.21726 | opp_overlap 1871923, overlap 1871919 1871918 1871916 TTTCATAAGATTGAA CATCTCAGTGAC CACTC GTCCCTGAGATG TTCATAAATAAAAAT TERM 2191 1871923 - 1871951 + r 89 -11.8 -3.18383 | opp_overlap 1871919 1871918 1871916 1871923 TTTCATAAGATTGAA CATCTCAGTGAC CACTC GTCCCTGAGATG TTCATAAATAAAAAT adhC 1873097 - 1871988 - | glutathione-dependent formaldehyde dehydrogenase ACIAD1880 1873394 - 1873119 - | hypothetical protein TERM 2192 1873305 - 1873342 + g 85 -2 -5.86061 | opp_overlap 1873310, overlap 1873306 ACATGAAGTGTCATC ATTAAGCGCACGTTCA ATTGCC TGAACCTGCCCTTGAA TTTTTTTTACTCGAA ACIAD1881 1873639 - 1875201 + | putative phospholipase D protein ACIAD1882 1875791 - 1875207 - | putative G:T/U mismatch-specific DNA glycosylase ACIAD1883 1876542 - 1875793 - | short chain dehydrogenase ACIAD1884 1877248 - 1876550 - | putative phosphoglycerate mutase related protein ACIAD1885 1878366 - 1877263 - | putative phosphotransferase TERM 2193 1878068 - 1878040 - G 73 -7.5 -4.21194 | TTTCATTACGTAAAA GTCACAACCAATC ACG GATTGATCCTGAC ACAATGCAATCATTT ACIAD1886 1879636 - 1878395 - | putative acyl-CoA dehydrogenase TERM 2194 1878550 - 1878512 - G 81 -5.3 -5.14965 | gap 1, opp_overlap 1878541, overlap 1878513 AGCTTGAGCAAAAAA TGCGGTCAATGGCGTATC TTGC GATACACCAGC-ACCGCC GTGTATTTGTATCGC TERM 2195 1878549 - 1878513 - G 75 -8.8 -3.68256 | gap 1, opp_overlap 1878541, overlap 1878512 GCTTGAGCAAAAAAT GCGGTCAATGGCGTATC TTGC GATACACCAGC-ACCGC CGTGTATTTGTATCG ACIAD1887 1879728 - 1880657 + | LysR family transcriptional regulator ACIAD1888 1881318 - 1880716 - | putative oxydoreductase related to nitroreductase ACIAD1889 1881941 - 1881450 - | hypothetical protein TERM 2196 1882017 - 1882005 - R 88 -7.7 -4.99035 | TCATCCAGATAAAAA CTGCT GAT AGCAG AATTCAGTTCAAATC fumC 1883431 - 1882037 - | fumarate hydratase TERM 2197 1882532 - 1882520 - G 78 -9.1 -3.76759 | overlap 1882506 ACGAATTTCACCAAA TCCGC AAC GCGGA CCACTTGCCAGCCAA TERM 2198 1882896 - 1882912 + g 78 -2.3 -5.45652 | opp_overlap 1882896 CCAATTTTGACAATA TCAGA AAATTCA TCTGA TTTTTTCTTCAAGGT ACIAD1891 1884584 - 1883580 - | putative UDP-galactose 4-epimerase (GalE-like) ACIAD1892 1884656 - 1885024 + | putative intracellular sulfur oxidation protein (DsrE-like) TERM 2199 1885362 - 1885344 - g 70 -2.5 -5.02074 | gap 1, opp_overlap 1885344 1885350 TTATTTCGTAAAAAA CTCAGATC AAGA GAT-TGAG TTTATCGAATTTAAC ACIAD1893 1885069 - 1885419 + | hypothetical protein ACIAD1894 1885427 - 1885708 + | hypothetical protein TERM 2200 1885982 - 1885996 + G 72 -10 -2.8085 | opp_overlap 1885981, overlap 1885981 AGCGATTTAATACAG GTCTGG TGG CCAGAC ATTTAAGTCGATTGG ACIAD1895 1885732 - 1886043 + | putative sulfite reductase ACIAD1896 1886923 - 1886048 - | putative permease (drug/metabolite transporter) TERM 2201 1887013 - 1886984 - H 77 -8.7 -3.65656 | overlap 1886985 TTACGACAGAGACAA TGCAGTACAATTT TAAA AAACTGTACTGCT CATAATTTCCATACA TERM 2202 1887012 - 1886985 - H 84 -12.2 -2.78912 | overlap 1886984 TACGACAGAGACAAT GCAGTACAATTT TAAA AAACTGTACTGC TCATAATTTCCATAC TERM 2203 1887334 - 1887344 + G 88 -6.8 -5.14563 | TCCCGTCAGCTTTTA GAGG CCT CCTC TTTTTTAATCAAGGC ACIAD1897 1887046 - 1888446 + | GntR family transcriptional regulator modC 1889217 - 1888570 - | molybdate ABC transporter ATP-binding protein modB 1889897 - 1889214 - | molybdate ABC transporter permease protein TERM 2204 1889857 - 1889831 - G 76 -9.5 -3.54489 | opp_overlap 1889836, overlap 1889836 CGAATGGCAAATTAA CCAAAGTGGCA AATAA TCCCACTTTGG CAGACAAATATAAGG modA 1890667 - 1889906 - | molybdate ABC transporter periplasmic substrate-binding protein moeA 1891904 - 1890678 - | molybdopterin biosynthesis protein TERM 2205 1891506 - 1891526 + g 73 -9.7 -2.98823 | opp_overlap 1891506, overlap 1891508 1891510 GGTATGTGCCATTAA CGGATCCGT AAT GCGGATCTG TGTATCTGAAACGAC moaC 1892827 - 1891904 - | bifunctional molybdenum cofactor biosynthesis protein C/molybdopterin-binding protein TERM 2206 1892322 - 1892335 + g 73 -3.8 -5.00616 | opp_overlap 1892314 TCTACAACAGATTTT CCTG CTGTAT CAGG TTTTTTACCAGACGC moaE 1893402 - 1892848 - | molybdopterin converting factor, large subunit ACIAD1905 1893610 - 1893359 - | hypothetical protein moaA 1894618 - 1893611 - | molybdopterin biosynthesis, protein A mobA 1895405 - 1894746 - | molybdopterin-guanine dinucleotide synthase nasA 1898179 - 1895381 - | nitrate reductase, large subunit ACIAD1909 1899850 - 1898213 - | putative nitrate reductase (electron transfer subunit) and putative nitrite reductase (small subunit) nasD 1902429 - 1899862 - | nitrite reductase, large subunit, nucleotide-and Fe/S-cluster binding TERM 2207 1901030 - 1901051 + g 71 -9.5 -3.00863 | gap 1, opp_overlap 1901018 1901017 1901028 1901027 1901036, overlap 1901027 1901036 AACGGAGCACAACCT CCACAAGCGG TAG CCGCTT-TGG TGCATTTTTTTAATG TERM 2208 1901036 - 1901046 + g 75 -8.2 -3.86795 | opp_overlap 1901028 1901027 1901036, overlap 1901030 1901027 GCACAACCTCCACAA GCGG TAG CCGC TTTGGTGCATTTTTT ACIAD1911 1903785 - 1902439 - | MFS superfamily nitrate transporter transmembrane protein TERM 2209 1903321 - 1903333 + gH 77 -9.1 -3.1855 | overlap 1903328 TGCATTTCCCCAACC TGCGG AAG CCGCA TTGGCTGTTCCGACC TERM 2210 1903429 - 1903397 - GH 70 -2.7 -4.92757 | overlap 1903407 TGAGTAATAACAAAA CTTGCACCAATTG CGCCAAT CAATAGGCGAAAG AACAAAAAAGATTCA TERM 2211 1903711 - 1903685 - GH 100 -5 -6.11392 | AAACAAACAAAAAAA GCGAGCCAAC TCATATG GAAGGCTCGC ATCGCTGGAACACTA ACIAD1912 1903758 - 1903901 + | hypothetical protein TERM 2212 1904122 - 1904132 + FH 79 -4 -5.52986 | TAATGTTTCAAATGC CAAT TGC ATTG TTTTTTTCATGGCAT TERM 2213 1904153 - 1904163 + FH 71 -5.4 -4.59117 | overlap 1904156 TTCATGGCATCGATT TTGC AAT GCAA TTTTGTCATTGATTT TERM 2214 1904430 - 1904420 - g 71 -6.8 -4.12475 | opp_overlap 1904419 GAGATATTATAGAAA GCTG TGT CAGC CGTTTCGATTTACCT nasT 1904224 - 1904829 + | response regulator protein ACIAD1914 1904816 - 1905847 + | putative nitrate transport protein (NasF) TERM 2215 1905898 - 1905941 + F 100 -12.8 -4.27007 | opp_overlap 1905900, overlap 1905900 TTAATTACTTGTAAG CAGTTTTGAATGTAGATTAA ATAT TTAATCTACAGTCAAAACTA TTTATTCAATCTTTA TERM 2216 1905939 - 1905900 - f 100 -15.4 -2.72839 | opp_overlap 1905898 1905900 AATTACTTGTAAGCA GTTTTGAATGTAGATTAA ATAT TTAATCTACAGTCAAAAC TATTTATTCAATCTT TERM 2217 1905900 - 1905939 + F 100 -15.4 -3.71981 | opp_overlap 1905900, overlap 1905898 AATTACTTGTAAGCA GTTTTGAATGTAGATTAA ATAT TTAATCTACAGTCAAAAC TATTTATTCAATCTT ACIAD1915 1906023 - 1908413 + | putative oxidoreductase molybdopterin fdhD 1908406 - 1909227 + | formate dehydrogenase formation protein ACIAD1917 1909461 - 1909255 - | hypothetical protein ACIAD1918 1909584 - 1909751 + | hypothetical protein ACIAD1919 1909706 - 1910251 + | hypothetical protein TERM 2218 1910272 - 1910249 - T 86 -6.1 -5.55695 | gap 1, opp_overlap 1910249 1910252 GAAGAACATAAAAAA TAAGCTG-CG TTATT CGACAGCTTA TTTTAAAAAGACTTT TERM 2219 1910389 - 1910428 + T 100 -16 -3.6135 | opp_overlap 1910401, overlap 1910401 TTTACCCTGCGGGGC CTTGCGAAAAAATAAGGC TGTC GCCTTATTTTTTCTCAGG TTTGAAGCTATCTTT TERM 2220 1910401 - 1910416 + T 89 -7.6 -5.28826 | opp_overlap 1910401, overlap 1910389 GGCCTTGCGAAAAAA TAAGGC TGTC GCCTTA TTTTTTCTCAGGTTT TERM 2221 1910416 - 1910401 - T 88 -7.6 -5.00616 | opp_overlap 1910401 1910389 GGCCTTGCGAAAAAA TAAGGC TGTC GCCTTA TTTTTTCTCAGGTTT glnS 1912141 - 1910414 - | glutaminyl-tRNA synthetase TERM 2222 1910668 - 1910686 + g 72 -7.4 -3.91084 | opp_overlap 1910668 1910667, overlap 1910671 GGCGATCATAAATAC GCACTTCC GCA GGAAGTCC TTTGGTTGCAGATAC ppiB 1912309 - 1912818 + | peptidyl-prolyl cis-trans isomerase precursor (PPIase) (rotamase) TERM 2223 1912875 - 1912907 + G 84 -11.4 -3.11726 | opp_overlap 1912882, overlap 1912882 ATTTACATTTGTCAC CTGAACACCCTCGA CTCAT TCGAGGGTTTTTAG ATTTATTACAATCTT TERM 2224 1912900 - 1912882 - g 76 -10.3 -3.05844 | opp_overlap 1912882 1912875 TTTGTCACCTGAACA CCCTCGA CTCAT TCGAGGG TTTTTAGATTTATTA TERM 2225 1912882 - 1912900 + G 100 -10.3 -4.86939 | opp_overlap 1912882, overlap 1912875 TTTGTCACCTGAACA CCCTCGA CTCAT TCGAGGG TTTTTAGATTTATTA TERM 2226 1913326 - 1913316 - g 84 -5.4 -5.40072 | GCTTTCGTAAAAAAA GTCA TGA TGAC AAGCAACAAAAAACT TERM 2227 1913470 - 1913454 - g 71 -2.2 -5.24129 | CTTTGGGACAAAAAA CCCGAA TCGTT TTAGGG GATTGGCGAGAAAAA lpxH 1912838 - 1913566 + | UDP-2,3-diacylglucosamine hydrolase nfnB 1913671 - 1914324 + | dihydropteridine reductase TERM 2228 1914371 - 1914329 - T 75 -10.1 -2.6027 | gap 1, opp_overlap 1914335, overlap 1914335 CTAAAATTTAACCTA GAAAAAGGTCATCTGGTCTA TTAA TA-ACCCGATGACCTTGTTC ACATCGCTTGAGCAA TERM 2229 1914365 - 1914335 - T 88 -7.7 -4.91712 | gap 1, opp_overlap 1914335, overlap 1914329 TTTAACCTAGAAAAA GGTCATCTGGTCTA TTAA TA-ACCCGATGACC TTGTTCACATCGCTT TERM 2230 1914335 - 1914365 + T 71 -7.7 -3.6579 | gap 1, opp_overlap 1914335 1914329 TTTAACCTAGAAAAA GGTCATCTGGTCTA TTAA TA-ACCCGATGACC TTGTTCACATCGCTT ACIAD1924 1915221 - 1914370 - | putative integral membrane protein TERM 2231 1915015 - 1915000 - G 78 -4 -5.1356 | overlap 1915002 GGCCAGTAATAAAAA TACACT TGGC AGTGCA ATGCCCAATAGTACA TERM 2232 1915271 - 1915242 - R 100 -13.1 -4.7373 | gap 1, opp_overlap 1915245 1915250, overlap 1915245 1915250 CTACCTCATCAAAAA CAAGAAAAGCCCAT CAA ATGGGCTTTTCT-G AATTTCGGACTAATT TERM 2233 1915269 - 1915245 - R 100 -15.9 -4.47707 | opp_overlap 1915245 1915250, overlap 1915242 1915250 CCTCATCAAAAACAA GAAAAGCCCAT CAA ATGGGCTTTTC TGAATTTCGGACTAA TERM 2234 1915245 - 1915269 + r 100 -15.9 -2.64803 | opp_overlap 1915245 1915242 1915250, overlap 1915250 CCTCATCAAAAACAA GAAAAGCCCAT CAA ATGGGCTTTTC TGAATTTCGGACTAA TERM 2235 1915264 - 1915250 - R 100 -10 -5.16681 | opp_overlap 1915245 1915250, overlap 1915245 1915242 TCAAAAACAAGAAAA GCCCAT CAA ATGGGC TTTTCTGAATTTCGG TERM 2236 1915250 - 1915264 + r 100 -10 -4.51196 | opp_overlap 1915250 1915245 1915242, overlap 1915245 TCAAAAACAAGAAAA GCCCAT CAA ATGGGC TTTTCTGAATTTCGG fda 1916322 - 1915285 - | fructose-1,6-bisphosphate aldolase TERM 2237 1916403 - 1916422 + r 81 -7.8 -4.28651 | opp_overlap 1916404, overlap 1916404 GAATTTCACAAAAAA ATCCCTGC ATTT GCAGGGAC TTTTGACATTTTGCT TERM 2238 1916404 - 1916421 + r 87 -11.3 -3.16106 | opp_overlap 1916404, overlap 1916403 AATTTCACAAAAAAA TCCCTGC ATTT GCAGGGA CTTTTGACATTTTGC TERM 2239 1916421 - 1916404 - R 100 -11.3 -5.63504 | opp_overlap 1916403 1916404 AATTTCACAAAAAAA TCCCTGC ATTT GCAGGGA CTTTTGACATTTTGC ACIAD1926 1916701 - 1916444 - | hypothetical protein TERM 2240 1916642 - 1916657 + g 79 -3.2 -5.27335 | overlap 1916637 1916643 AGTTTGTCCTTGCTC AGATGC TGGT GCATCG TTTTTCTTTGAACAA TERM 2241 1916829 - 1916808 - R 95 -12.3 -3.737 | opp_overlap 1916808 1916811, overlap 1916811 GAATCTCTTATGAAA GAACCGACC ATAA GGCCGGTTC TTTTAAAAACACGTC TERM 2242 1916808 - 1916829 + r 87 -10.1 -4.07885 | opp_overlap 1916808 1916811, overlap 1916811 GAATCTCTTATGAAA GAACCGACC ATAA GGCCGGTTC TTTTAAAAACACGTC TERM 2243 1916826 - 1916811 - R 79 -8.2 -4.00042 | opp_overlap 1916808 1916811, overlap 1916808 TCTCTTATGAAAGAA CCGACC ATAA GGCCGG TTCTTTTAAAAACAC pgk 1918037 - 1916850 - | phosphoglycerate kinase ACIAD1928 1918041 - 1918178 + | hypothetical protein ACIAD1929 1918186 - 1918569 + | hypothetical protein ACIAD1930 1918569 - 1919165 + | putative Maf-like protein TERM 2244 1919190 - 1919217 + T 100 -10 -5.86965 | opp_overlap 1919190 AAAACCTTAAAAAAA GCATTCAGGAAT CATG GTTTCTGAATGC TTTTTTTTCATAGGT TERM 2245 1919217 - 1919190 - T 93 -7.1 -5.51165 | opp_overlap 1919190 AAAACCTTAAAAAAA GCATTCAGGAA TCATGG TTTCTGAATGC TTTTTTTTCATAGGT ACIAD1931 1920573 - 1919260 - | putative magnesium citrate secondary transporter ACIAD1933 1920832 - 1921998 + | hypothetical protein TERM 2246 1922353 - 1922383 + G 79 -3.3 -5.27938 | gap 1, opp_overlap 1922337 1922362, overlap 1922359 1922362 CAAACATTCAATTTT GCGTAA-TTACCCA ATTA TGGGTCACTTTCGC TTTTTATTTGAAGAT ACIAD1934 1922114 - 1923784 + | putative ferredoxin-dependent glutamate synthase TERM 2247 1923801 - 1923838 + T 70 -4.2 -4.67357 | overlap 1923797 1923804 CAAAAATAAGCCATA TGGGGCGTATTCCAAT GATTCG ACTTGAATACGCCTTA TTGTTTTTATTCATT TERM 2248 1923804 - 1923835 + T 72 -5.9 -4.40123 | overlap 1923801 1923797 AAATAAGCCATATGG GGCGTATTCCAAT GATTCG ACTTGAATACGCC TTATTGTTTTTATTC ACIAD1935 1924966 - 1923845 - | putative sigma-54 dependent transcriptional regulator ACIAD1936 1925998 - 1925132 - | putative signal peptide TERM 2249 1926211 - 1926239 + r 100 -11.9 -5.59879 | opp_overlap 1926212, overlap 1926212 ATTTTTCTAAAAAAA AGGGATTTATTCT CAA AGAATAAATCCCC TTTTTTATATTTATA TERM 2250 1926212 - 1926238 + r 100 -15.4 -3.93487 | opp_overlap 1926212, overlap 1926211 TTTTTCTAAAAAAAA GGGATTTATTCT CAA AGAATAAATCCC CTTTTTTATATTTAT TERM 2251 1926238 - 1926212 - R 100 -15.4 -5.75342 | opp_overlap 1926211 1926212 TTTTTCTAAAAAAAA GGGATTTATTCT CAA AGAATAAATCCC CTTTTTTATATTTAT braG 1927001 - 1926258 - | branched-chain amino acid ABC transporter ATP-binding protein ACIAD1938 1928437 - 1927016 - | hypothetical protein braE 1929533 - 1928463 - | branched chain amino acid ABC transporter ACIAD1940 1930417 - 1929536 - | branched chain amino acid ABC transporter permease braF 1931248 - 1930445 - | branched-chain amino acid ABC transporter ATP-binding protein ACIAD1942 1932472 - 1931255 - | putative long-chain-fatty-acid--CoA ligase-related protein TERM 2252 1932648 - 1932629 - R 100 -9.3 -5.4756 | opp_overlap 1932629 AATCTCAATAAAAAA GCCAGCA TTGAAT TGCTGGC TTTAAAAAATATGCT TERM 2253 1932629 - 1932648 + r 80 -9.3 -3.56821 | opp_overlap 1932629 AATCTCAATAAAAAA GCCAGCA TTGAAT TGCTGGC TTTAAAAAATATGCT ACIAD1943 1933700 - 1932672 - | putative lysophospholipase ACIAD1944 1934855 - 1933701 - | hypothetical protein TERM 2254 1933927 - 1933937 + g 88 -6.8 -5.24129 | ACCAACATCACTGTC GGTG CTC CACC TTTTTTCTGAAGAAG murB 1935899 - 1934862 - | UDP-N-acetylenolpyruvoylglucosamine reductase, FAD-binding ACIAD1946 1936427 - 1935924 - | putative phosphotyrosine protein phosphatase (PtpA) TERM 2255 1937059 - 1937076 + r 84 -5.5 -5.51402 | opp_overlap 1937061, overlap 1937061 CGATTCGCCAAAAAA AAGCACC CTAA GGTGCTC TTTTTTTAGATCTAT TERM 2256 1937074 - 1937061 - R 93 -8.1 -5.75945 | opp_overlap 1937061 1937059 ATTCGCCAAAAAAAA GCACC CTAA GGTGC TCTTTTTTTAGATCT TERM 2257 1937061 - 1937074 + r 83 -8.1 -4.38666 | opp_overlap 1937061, overlap 1937059 ATTCGCCAAAAAAAA GCACC CTAA GGTGC TCTTTTTTTAGATCT csp 1937304 - 1937095 - | cold shock-like protein TERM 2258 1937505 - 1937521 + H 77 -5.3 -5.0065 | opp_overlap 1937516, overlap 1937511 AGAACATTCAAGCTT TTTATAT AAA ATATAAA TTTTATTTATAAATG TERM 2259 1937532 - 1937516 - H 71 -5.3 -4.52589 | opp_overlap 1937505 1937511 GCTTTTTATATAAAA TATAAAT TTT ATTTATA AATGTGAATTATTGA ACIAD1949 1937588 - 1937719 + | hypothetical protein TERM 2260 1938508 - 1938494 - g 74 -4.2 -5.08011 | AAAAGTTTTAAAAAA TGCTCA GGA TGCGCA AGCACGCCAAAACAT TERM 2261 1938594 - 1938610 + G 75 -5.1 -4.82678 | overlap 1938596 GTACATGCGCTTGCG TATCCAC TTG GTGGACA TTTTCATTTTTCTCA ACIAD1950 1937790 - 1938950 + | putative iron-containing alcohol dehydrogenase ACIAD1951 1938947 - 1939393 + | putative thioesterase terZ 1940052 - 1939474 - | tellurium resistance protein ACIAD1953 1940804 - 1940085 - | hypothetical protein TERM 2262 1940783 - 1940770 - G 76 -6.7 -4.46155 | GATACATGCAGAAAA GGTTC TGGC GAACC AACTAAACTGAACTG ACIAD1954 1942127 - 1940817 - | putative tellurium resistance protein (TerF) TERM 2263 1942184 - 1942159 - R 100 -11.3 -5.90231 | opp_overlap 1942164 ATAAATATAAAAAAA GAAGATAGTGC CTAA ACACTATCTTC CACATACATCTTAAA terE 1942770 - 1942195 - | tellurium resistance protein TERM 2264 1942860 - 1942873 + r 74 -3.1 -5.21709 | TCTACCCATTTTTAT CAAGC TTGT GTTTG TTTTTTACTGTAAGC ACIAD1956 1943929 - 1942859 - | hypothetical protein terD 1944568 - 1943990 - | tellurium resistance protein TERM 2265 1944413 - 1944388 - G 73 -2.7 -5.24129 | gap 1, opp_overlap 1944394, overlap 1944394 GTTGGTTATAAAAAA TAAAAT-CGTGA TCG CCACGTACTTTA CCTGTTGCAGTTAAT terA 1945871 - 1944672 - | tellurium resistance protein ACIAD1959 1946778 - 1945897 - | hypothetical protein ACIAD1960 1947934 - 1946783 - | hypothetical protein TERM 2266 1946846 - 1946859 + g 71 -3.1 -5.04325 | AATCTGATCACCAAC CACTT GTAC AGGTG TTTTTGTGATTTGGG TERM 2267 1947781 - 1947799 + g 78 -7.4 -4.53475 | overlap 1947783 GTGAATAATGCTTCT CTCCTGAT TGA ATCAGGCG TTCTTTTTCTGCGGT ACIAD1961 1948748 - 1947918 - | hypothetical protein ACIAD1962 1949871 - 1948732 - | hypothetical protein TERM 2268 1949800 - 1949818 + g 70 -6 -4.26344 | opp_overlap 1949799, overlap 1949802 AAAACCGAGTAAATC TTGCCATT TCC AATGGCTA TTTTCATCAGGCTGT TERM 2269 1949802 - 1949816 + g 73 -8.6 -3.7331 | opp_overlap 1949799, overlap 1949800 AACCGAGTAAATCTT GCCATT TCC AATGGC TATTTTCATCAGGCT ACIAD1963 1950966 - 1949914 - | hypothetical protein ACIAD1964 1952492 - 1950963 - | putative protein kinase ACIAD1965 1954293 - 1952485 - | hypothetical protein TERM 2270 1953221 - 1953209 - G 78 -9.1 -3.78934 | CCTTGTCGAGAATAA CTGGC ACT GCCAG CGCCGTCTGCAACAA ACIAD1966 1955373 - 1954315 - | putative tellurium resistance protein TERM 2271 1954915 - 1954930 + g 71 -4.7 -4.62872 | TGTTAATTGCTTGAG CGTTG CATAAT CAACG TTTTTACCCATTCCT ACIAD1967 1956042 - 1955407 - | putative tellurium resistance protein (TerY-like) TERM 2272 1955773 - 1955753 - G 78 -9.7 -3.53444 | overlap 1955754 1955763 1955764 GTACTTTTTTGTAAA TGCTGAGCA ACT TGCTCAGCC AGCAACTCAAGTGCA TERM 2273 1955772 - 1955754 - G 91 -13.2 -2.71924 | overlap 1955753 1955763 1955764 TACTTTTTTGTAAAT GCTGAGCA ACT TGCTCAGC CAGCAACTCAAGTGC terX 1956721 - 1956080 - | tellurium resistance protein terY 1957394 - 1956756 - | tellurium resistance protein TERM 2274 1957905 - 1957890 - R 77 -5.4 -4.92363 | opp_overlap 1957890, overlap 1957878 AAATATTTACAAAAA TAGGCC CGTA AGCCTA TTCTAAAAATAATAG dnaX 1960059 - 1957924 - | DNA polymerase III, tau and gamma subunits (DNA elongation factor III) smvA 1961700 - 1960201 - | major facilitator superfamily methyl viologen resistance protein TERM 2275 1960687 - 1960670 - G 72 -6.3 -4.25104 | gap 1 TGCTGTGTATCAAAA TGGG-TGG TTG CCAACCCA AAAAAGCTTACAGCA TERM 2276 1961225 - 1961212 - G 77 -4.5 -4.92777 | AACATTAATCAAAAA CACGG TTCC CCATG AAAAATGTTCAAGAA TERM 2277 1961773 - 1961718 - H 93 -10 -4.09556 | gap 1, opp_overlap 1961718 1961752, overlap 1961708 CACACCCAAATTAAA GTTGGACACTTGTTCAAG-TTGAGGAC ATT ATATTCAAACTTGAACAGATGTCCAAC TTTGTTTAATATGTC TERM 2278 1961718 - 1961773 + H 100 -11.5 -4.55209 | gap 1, opp_overlap 1961708 1961718, overlap 1961752 CACACCCAAATTAAA GTTGGACACTTGTTCAAG-TTGAGGA CATTA TATTCAAACTTGAACAGATGTCCAAC TTTGTTTAATATGTC TERM 2279 1962280 - 1962291 + G 73 -5.8 -4.52857 | opp_overlap 1962273 1962269 TAAAGACATCGCATG GCGA CTCA TCGC TTTTGTGTGCGGCAT ACIAD1973 1961807 - 1962409 + | putative transcriptional regulator ACIAD1974 1963662 - 1962406 - | putative esterase TERM 2280 1962699 - 1962714 + g 72 -7.6 -3.79519 | GAATCTTGGAAAGCT CCTGAA ATAT TTCAGG TTTAATGATGACCTT TERM 2281 1963708 - 1963693 - R 84 -6.8 -5.08824 | opp_overlap 1963693 GTTTTATGTAAAAAA GCCCAA CGAA TCGGGC TTTAAAGATTTTTAT ACIAD1975 1964578 - 1963724 - | putative dehydratase TERM 2282 1963781 - 1963791 + g 70 -5.4 -4.52669 | opp_overlap 1963781, overlap 1963777 TTTTGCATTACGAAT CAGA AAA TCTG TTTCTTTAGATTGTT TERM 2283 1964252 - 1964234 - G 76 -10.4 -2.91689 | opp_overlap 1964222 1964220 1964232, overlap 1964222 1964233 AAATTGACATGAAAG TGTCAATG TTT CATTGACA GCAATTTTACGAATC TERM 2284 1964627 - 1964646 + r 78 -7.9 -4.26202 | opp_overlap 1964627 CATTTAAAAACAAAA GGGATGT CTTATC ACATCCC TTTGTTGATCAGTAT TERM 2285 1964646 - 1964627 - R 89 -7.9 -5.2853 | opp_overlap 1964627 CATTTAAAAACAAAA GGGATGT CTTATC ACATCCC TTTGTTGATCAGTAT fabG 1966061 - 1964661 - | 3-ketoacyl-(acyl-carrier-protein) reductase TERM 2286 1967342 - 1967356 + G 71 -8.6 -3.47494 | overlap 1967348 ACTCGACTCCACTCA CTGATG GTG CATCAG TTGTACTCCTTGCAT ACIAD1977 1966552 - 1967832 + | acetyl-CoA acetyltransferase TERM 2287 1967876 - 1967858 - T 100 -13.2 -5.79595 | opp_overlap 1967858 TCTGAAAATAAAAAA CAGCGCTT TCA AAGCGCTG TTTTTTATGAATGAC TERM 2288 1967858 - 1967876 + T 100 -13.2 -5.28176 | opp_overlap 1967858 TCTGAAAATAAAAAA CAGCGCTT TCA AAGCGCTG TTTTTTATGAATGAC ACIAD1978 1968285 - 1967881 - | hypothetical protein ACIAD1979 1968436 - 1969287 + | LysR family transcriptional regulator tal 1969360 - 1970349 + | transaldolase B TERM 2289 1970374 - 1970401 + F 100 -9.3 -5.4833 | opp_overlap 1970374 GTTCACATATATAAA CCGATTTTTGT TATAGT ACAGAAATCGG TTTTTTCTTGAGTAA TERM 2290 1970401 - 1970374 - f 75 -7.1 -4.17296 | opp_overlap 1970374 GTTCACATATATAAA CCGATTTTTGT TATAGT ACAGAAATCGG TTTTTTCTTGAGTAA TERM 2291 1970786 - 1970830 + G 93 -2.2 -6.18768 | gap 1, opp_overlap 1970790, overlap 1970787 1970790 CAAATTCATCCTTAT C-GAACTGCTTTAGGCATTAG CTTA CTAAACCCTAAAGCAATCCTG TTTTTTTTATCTTTT TERM 2292 1970787 - 1970828 + G 75 -5.9 -4.67703 | opp_overlap 1970790, overlap 1970786 1970790 AAATTCATCCTTATC GAACTGCTTTAGGCATTAG CTTA CTAAACCCTAAAGCAATCC TGTTTTTTTTATCTT ACIAD1981 1970423 - 1971073 + | leucine export protein LeuE ACIAD1982 1971185 - 1972360 + | putative benzoate membrane transport protein TERM 2293 1972401 - 1972381 - T 86 -8.3 -4.7254 | opp_overlap 1972381 ACTTGTCATCAAAAA TACGATGCC TAA GCCATCGTA TTTTTATCCCAATAA TERM 2294 1972381 - 1972401 + T 90 -8.3 -4.84359 | opp_overlap 1972381 ACTTGTCATCAAAAA TACGATGCC TAA GCCATCGTA TTTTTATCCCAATAA ACIAD1983 1973111 - 1972389 - | putative transporter transmembrane protein (magnesium transporter) TERM 2295 1972807 - 1972781 - G 73 -10.3 -2.50016 | gap 1, opp_overlap 1972781 1972778, overlap 1972780 1972778 1972783 CCGCAGCACCAATAG CAGCAG-AACAC CAAA GTGTTGCTGCTG TATTTAAACCATGGA TERM 2296 1972781 - 1972807 + g 78 -10.3 -3.35597 | gap 1, opp_overlap 1972780 1972778 1972781 1972783, overlap 1972778 CCGCAGCACCAATAG CAGCAG-AACAC CAAA GTGTTGCTGCTG TATTTAAACCATGGA mgtA 1975881 - 1973119 - | magnesium-transporting ATPase MgtA TERM 2297 1974631 - 1974665 + g 82 -8 -4.4767 | opp_overlap 1974642 GACTGCATGCGATTT TTTTCCTAACACATCG ACA TGATGTGATAGAAAAA TTTTATCCTGCGTCA TERM 2298 1974741 - 1974756 + g 74 -4 -5.02074 | overlap 1974730 TTTGGATTGCATCCA GTCGTT TCAC AATGAC TTTTTTACGCGATAA TERM 2299 1975002 - 1974977 - G 80 -9.1 -3.96618 | CCCAACTGGAAAGAA GTGACTGCA TGATCTGT TGCAGTCAC GCGATGAGCCAGCGC ACIAD1985 1976673 - 1975981 - | hypothetical protein ACIAD1986 1977410 - 1976967 - | hypothetical protein TERM 2300 1977324 - 1977311 - G 81 -5.3 -5.24129 | TTCCTTGATAAAAAA TCCAT GCCG ATGGA ATAATAGCCAGGGTC map 1978351 - 1977554 - | methionine aminopeptidase TERM 2301 1979651 - 1979665 + G 78 -5.8 -4.78981 | TTAACTAACTTGCCT TACAAA TTA TTTGTA TTTGTTTTAGTTGCT braZ 1978715 - 1980016 + | branched chain amino acid transporter ACIAD1989 1980530 - 1980700 + | hypothetical protein TERM 2302 1980707 - 1980690 - f 75 -8.5 -3.50447 | opp_overlap 1980690 CCAATTTGGAGAGAA TGGATGA GTAA TCATCCA TTTTTTATACCTTGC TERM 2303 1980690 - 1980707 + F 95 -8.5 -5.31456 | opp_overlap 1980690 CCAATTTGGAGAGAA TGGATGA GTAA TCATCCA TTTTTTATACCTTGC TERM 2304 1981925 - 1981937 + G 75 -5.5 -4.86731 | ACAGATCAGTTTAAT CGTCT AAT GGACG TTTTATTTCAACCCC TERM 2305 1983746 - 1983765 + G 73 -8.6 -3.65529 | CGTGGTCATCCGATC CTATCTGC CGAG GCAGATGG TTTGCATCCAAGTAT fruB 1981187 - 1984039 + | phosphotransferase system, fructose-specific EI/HPr/EIIA components TERM 2306 1984796 - 1984784 - g 71 -6.9 -4.13304 | AAATGACTGTGAAAA GCACC GTA GGCGC TGGTGATTCTTTATT fruK 1984045 - 1984977 + | 1-phosphofructokinase TERM 2307 1985123 - 1985144 + G 89 -10.3 -3.98448 | opp_overlap 1985128, overlap 1985128 ATTAAAGATTCAGTT CCAAATCAA GAAT TTGATTTGG TTATCTTTATTGGTC TERM 2308 1986042 - 1986021 - g 80 -3.8 -5.40072 | gap 1, overlap 1986025 TCCTTGCCAAAAAAA TCAA-GCTC CCAAC GAGCCTTGA ATCATTAAAGCCAAT fruA 1984979 - 1986706 + | phosphotransferase system, fructose-specific IIBC component TERM 2309 1986752 - 1986727 - f 79 -9.1 -3.40141 | opp_overlap 1986732, overlap 1986732 TAAAAGTTCAAGCAA GAAAAGAGAGC TCAG GCTCTCTTTTT TATGTCAAGATGTTC TERM 2310 1986732 - 1986747 + F 95 -9 -5.36441 | opp_overlap 1986732 1986727 GTTCAAGCAAGAAAA GAGAGC TCAG GCTCTC TTTTTTATGTCAAGA TERM 2311 1986747 - 1986732 - f 93 -9 -4.78572 | opp_overlap 1986732, overlap 1986727 GTTCAAGCAAGAAAA GAGAGC TCAG GCTCTC TTTTTTATGTCAAGA ACIAD1995 1986873 - 1987421 + | hypothetical protein ispF 1987900 - 1987409 - | 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase ACIAD1997 1987998 - 1988648 + | hypothetical protein TERM 2312 1988673 - 1988650 - T 87 -10.4 -3.81951 | opp_overlap 1988650 GCTTATATGATTAAA CGGCATATTC TGAC AAATATGCCG TTTCTTAAAGTTTTA TERM 2313 1988650 - 1988673 + T 93 -9.7 -4.24711 | opp_overlap 1988650 GCTTATATGATTAAA CGGCATATT CTGACA AATATGCCG TTTCTTAAAGTTTTA dadA 1989930 - 1988686 - | D-amino acid dehydrogenase small subunit ispD 1991031 - 1990312 - | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase ACIAD2000 1991329 - 1990997 - | putative cell division protein (FtsB-like) TERM 2314 1991082 - 1991100 + gr 73 -8.2 -3.5394 | opp_overlap 1991082 TAAATTGGCTTATAA TGAGTACT GAT GGTACTCA TTTGCACAAAGGTTT eno 1992694 - 1991399 - | enolase TERM 2315 1992735 - 1992718 - R 89 -8.5 -4.53777 | TTGAATGAAAAATAA GATGCAA TCAT TTGCATC AATGAGTATCTAACT kdsA 1993591 - 1992734 - | 2-dehydro-3-deoxyphosphooctonate aldolase TERM 2316 1993147 - 1993162 + g 76 -2.6 -5.28683 | gap 1 GATTCATTTCACGCG GCGACAA GAA TTGT-GC TTTTTTAATATTAAT TERM 2317 1993443 - 1993470 + g 70 -7.8 -3.60098 | GGGATTTCAAGGCGT TTGCAGATATCT ACAT AGGTTTCTGCAA TTTCAAATGCAAGAT TERM 2318 1993548 - 1993520 - G 100 -16.3 -3.9122 | opp_overlap 1993522 1993526, overlap 1993526 CATTCCGCCAAATAA TACAAATGGCAAA TGA TTTGCCATTTGTA TATCGCCTAAACGTA TERM 2319 1993522 - 1993546 + g 100 -14.5 -2.89564 | opp_overlap 1993520 1993526, overlap 1993526 TTCCGCCAAATAATA CAAATGGCAAA TGA TTTGCCATTTG TATATCGCCTAAACG TERM 2320 1993542 - 1993526 - G 88 -9.5 -4.40333 | opp_overlap 1993522 1993526, overlap 1993520 GCCAAATAATACAAA TGGCAAA TGA TTTGCCA TTTGTATATCGCCTA TERM 2321 1993526 - 1993542 + g 85 -9.5 -4.13246 | opp_overlap 1993526 1993520, overlap 1993522 GCCAAATAATACAAA TGGCAAA TGA TTTGCCA TTTGTATATCGCCTA pyrG 1995256 - 1993619 - | CTP synthetase TERM 2322 1995811 - 1995789 - g 76 -10.6 -2.98034 | opp_overlap 1995786, overlap 1995777 1995776 1995786 1995791 GAGGAACCTAAAGTA GATTCTGCTG CTT CTGCAGAATC AGCAAACACCCCAAG ACIAD2004 1995483 - 1995920 + | hypothetical protein TERM 2323 1995942 - 1995961 + F 72 -5 -4.67943 | TTATGCACTGAATCA GCCTGTAT TTAA ATATGGGC TTTTCTATCTTAAAA TERM 2324 1996088 - 1996068 - f 75 -6.9 -4.10855 | opp_overlap 1996068 AAAATCCTCTCAAAA CTGATCTTA TGC TAAGCTCAG TCAATTATATTATTT ACIAD2005 1996139 - 1996582 + | putative universal stress protein TERM 2325 1996703 - 1996663 - T 89 -8.5 -4.29981 | GAAATACATGGAAAA TGCACGATAAATAGGTT TTTGATT AATCTATTTGTCGTGCA GGTGTACAGACTTGA ACIAD2006 1997091 - 1996765 - | hypothetical protein TERM 2326 1997640 - 1997622 - R 77 -6 -4.7497 | overlap 1997625 TTTACTGATTAAAAA TGATTGAG CCT CTCAAACA CCCATATAAAAAAGC TERM 2327 1997698 - 1997654 - R 70 -2.3 -5.38047 | opp_overlap 1997685, overlap 1997655 1997697 CACCCATATAAAAAA GCTCTTAATCAAACGATTTTT TTA AAATACAGTTTCATTAAGAGA CTTTCTAAAGTCAAT ACIAD2007 1998152 - 1997718 - | hemolysin TERM 2328 1998208 - 1998241 + r 75 -9.7 -2.64134 | overlap 1998203 1998200 CTAATTTCTATTTAT TTCTAGGACTCTC CGTTTAAA GAGAGTCCTAGCA TAAATTAGTTTAATA pepN 2000882 - 1998273 - | aminopeptidase N TERM 2329 1999652 - 1999664 + g 79 -3.4 -5.27335 | GGAAGTATTCATCTG TTCC CTGAC GGAA TTTTTCTTTACCCAG TERM 2330 1999999 - 1999965 - G 78 -8.7 -3.76224 | overlap 1999966 1999968 TGTCCAGTTATGAAA GTATTCGTGTGCAAT TACCG ATTGCACACGCATAA TCGCAGCATCTGTCG TERM 2331 1999998 - 1999966 - G 83 -12.2 -2.8552 | overlap 1999965 1999968 GTCCAGTTATGAAAG TATTCGTGTGCAAT TACCG ATTGCACACGCATA ATCGCAGCATCTGTC TERM 2332 1999996 - 1999968 - G 76 -10.4 -2.97667 | overlap 1999966 1999965 CCAGTTATGAAAGTA TTCGTGTGCAAT TACCG ATTGCACACGCA TAATCGCAGCATCTG ACIAD2009 2001227 - 2001484 + | hypothetical protein TERM 2333 2001821 - 2001802 - g 74 -5 -4.79174 | overlap 2001804 ATTTAATGAAGAAAA TCGCAC CTGTCACT GTGCGA CATGCACTCAACAGC ACIAD2010 2001641 - 2002804 + | hypothetical protein thiM 2002829 - 2003653 + | hydoxyethylthiazole kinase TERM 2334 2003674 - 2003716 + T 79 -8.1 -4.07885 | gap 1, opp_overlap 2003679 2003681, overlap 2003668 2003677 2003678 2003681 TCAATTCTATATTTT TAAAAT-ATTTAGAGACGAT TTTA ATCGTCTCTAAATCGGTTTA TTTTAGCAGCAAATA TERM 2335 2003677 - 2003712 + T 72 -4.8 -4.64861 | opp_overlap 2003679 2003681, overlap 2003668 2003674 2003678 2003681 ATTCTATATTTTTAA AATATTTAGAGACGAT TTTA ATCGTCTCTAAATCGG TTTATTTTAGCAGCA TERM 2336 2003678 - 2003711 + T 72 -8.3 -3.38435 | opp_overlap 2003679 2003681, overlap 2003668 2003677 2003674 2003681 TTCTATATTTTTAAA ATATTTAGAGACGAT TTTA ATCGTCTCTAAATCG GTTTATTTTAGCAGC TERM 2337 2003710 - 2003679 - T 100 -11.8 -4.13014 | opp_overlap 2003668 2003678 2003677 2003674 2003681, overlap 2003681 TCTATATTTTTAAAA TATTTAGAGACGAT TTTA ATCGTCTCTAAATC GGTTTATTTTAGCAG TERM 2338 2003708 - 2003681 - T 100 -14.4 -3.66256 | opp_overlap 2003681 2003678 2003677 2003674, overlap 2003679 TATATTTTTAAAATA TTTAGAGACGAT TTTA ATCGTCTCTAAA TCGGTTTATTTTAGC TERM 2339 2003681 - 2003708 + T 93 -14.4 -2.84636 | opp_overlap 2003679 2003681, overlap 2003678 2003677 2003674 TATATTTTTAAAATA TTTAGAGACGAT TTTA ATCGTCTCTAAA TCGGTTTATTTTAGC ACIAD2012 2004565 - 2003714 - | AraC family transcriptional regulator ACIAD2013 2004998 - 2004627 - | putative 5-carboxymethyl-2-hydroxymuconate delta isomerase ACIAD2014 2006724 - 2005012 - | putative helicase TERM 2340 2006535 - 2006557 + g 71 -9.3 -2.9176 | opp_overlap 2006537, overlap 2006537 CAATGCCTGCCCAAG TATGAATGG TCATC CCATTCATA TGTGTCGCTGCAATT ACIAD2015 2006956 - 2008128 + | putative alcohol dehydrogenase TERM 2341 2008197 - 2008222 + F 100 -10.6 -6.02919 | GACTTACTCAGTTTT GGGAATATCA GTCCGG TGATATTCCC TTTTTTTCTTTCTCA TERM 2342 2009079 - 2009062 - g 71 -4.1 -4.7657 | CAAAAACCCGAAAAA GTGGAAT AAAG ATGCCAC ACAAAGTGATGTCAT TERM 2343 2009174 - 2009213 + G 95 -11.6 -3.86524 | gap 1, opp_overlap 2009176 ATCTCTAATGGACTA CATGATCTCGTACTATCCG CAA CAGAT-GTACGAGATCAGG TTTATCGACAACTCT TERM 2344 2009211 - 2009176 - g 100 -15 -2.82933 | gap 1, opp_overlap 2009174 CTCTAATGGACTACA TGATCTCGTACTATCCG CAA CAGAT-GTACGAGATCA GGTTTATCGACAACT ACIAD2016 2008307 - 2009257 + | hypothetical protein ACIAD2017 2010446 - 2009265 - | putative transcriptional regulator TERM 2345 2009345 - 2009330 - G 71 -9 -3.33315 | opp_overlap 2009329 2009332 GTAACAGCTCCATAA GACGCT CTAC AGCGTC AATTGCTTCTGGAAA TERM 2346 2009743 - 2009760 + g 73 -2.7 -5.15969 | AAAATTTCAATTTGT CTTGG CGTCAAAA CCAAG TTTTTTCCATTAAAA TERM 2347 2010354 - 2010384 + g 70 -5.7 -4.37092 | gap 2 CGCAATACTTTGTCC TAGT-TTT-TCCGCA TTT TGCGGAGAAAGACTA TTTTGTCGACGAAGT TERM 2348 2011801 - 2011789 - g 72 -6.3 -4.36063 | opp_overlap 2011788 2011789, overlap 2011783 ATAACAGTATGAAAA TCTTC CAA GAAGA AATTTTTGGACCAGT ald1 2010606 - 2012117 + | aldehyde dehydrogenase TERM 2349 2012131 - 2012158 + F 81 -7.8 -4.42653 | opp_overlap 2012136, overlap 2012136 AAGCTTATAACGTTT AAAAAGAGACTC TTCG GGGTCTCTTTTA TTTTATAGGTCGAAT TERM 2350 2012136 - 2012153 + F 88 -7.7 -5.19275 | opp_overlap 2012136, overlap 2012131 TATAACGTTTAAAAA GAGACTC TTCG GGGTCTC TTTTATTTTATAGGT TERM 2351 2012153 - 2012136 - f 71 -5.5 -4.63542 | opp_overlap 2012136 2012131 TATAACGTTTAAAAA GAGACTC TTCG GGGTCTC TTTTATTTTATAGGT ACIAD2019 2012260 - 2012955 + | glutamine amidotransferase TERM 2352 2012967 - 2012936 - T 70 -8.2 -3.25479 | opp_overlap 2012936 2012941, overlap 2012941 TGATGAAATATTTAA CAAAACTGAATCTT ATTT AAGATTCGGTTTTA CTTTGTTTAAATAAA TERM 2353 2012936 - 2012967 + T 70 -8.2 -3.27185 | opp_overlap 2012936 2012941, overlap 2012941 TGATGAAATATTTAA CAAAACTGAATCTT ATTT AAGATTCGGTTTTA CTTTGTTTAAATAAA TERM 2354 2012962 - 2012941 - T 77 -5.9 -4.7268 | opp_overlap 2012941 2012936, overlap 2012936 AAATATTTAACAAAA CTGAATCTT ATTT AAGATTCGG TTTTACTTTGTTTAA TERM 2355 2012941 - 2012962 + T 86 -8.1 -4.72863 | opp_overlap 2012936 2012941, overlap 2012936 AAATATTTAACAAAA CTGAATCTT ATTT AAGATTCGG TTTTACTTTGTTTAA ACIAD2020 2013186 - 2012983 - | hypothetical protein ACIAD2021 2013523 - 2013296 - | hypothetical protein TERM 2356 2013504 - 2013514 + g 81 -5.4 -5.16237 | opp_overlap 2013504, overlap 2013497 ATTTCGTCCAAATAT GCAA CAT TTGC TTTTTTCATGAGCTT ACIAD2022 2013719 - 2014549 + | AraC/XylS family transcription factor ACIAD2023 2014625 - 2015329 + | putative branched-chain amino acid transport protein (AzlC) ACIAD2024 2015302 - 2015643 + | hypothetical protein TERM 2357 2015654 - 2015693 + F 81 -8.2 -4.27259 | gap 1, opp_overlap 2015654 2015665 AGTGAGTGTGAGTAA GATATATCTAA-TCCAGTC ATG GATTGTAGTTAGATATATC TTTTGAGTATCTGTA ACIAD2025 2015814 - 2016311 + | hypothetical protein TERM 2358 2016875 - 2016851 - g 77 -3.5 -5.15969 | TCTCAATCTAAAAAA CCCAAACTG ACTATTG CAGCATGGG CACAATATGTTCTAG ACIAD2026 2016482 - 2017552 + | putative choloylglycine hydrolase protein ACIAD2027 2017596 - 2018087 + | hypothetical protein TERM 2359 2018091 - 2018120 + T 93 -12.9 -3.44146 | opp_overlap 2018092, overlap 2018092 AACAAGTCATAAAAA ATGCCTCACGTCA TTCA TGGCGTGAGGCAG TTAATTGTAAAGCAA TERM 2360 2018119 - 2018092 - T 100 -14.2 -5.3236 | opp_overlap 2018091 2018092 ACAAGTCATAAAAAA TGCCTCACGTCA TTCA TGGCGTGAGGCA GTTAATTGTAAAGCA TERM 2361 2018092 - 2018119 + T 100 -16.4 -2.66274 | opp_overlap 2018092, overlap 2018091 ACAAGTCATAAAAAA TGCCTCACGTCA TTCA TGGCGTGAGGCA GTTAATTGTAAAGCA aroC 2019232 - 2018141 - | chorismate synthase TERM 2362 2018391 - 2018373 - G 72 -9.6 -3.09671 | opp_overlap 2018362, overlap 2018377 AGTGCAATCGCAACA CGAATGGT TTG ACCACTCG AAATTCCACCTAAAA TERM 2363 2018675 - 2018661 - G 72 -7.8 -3.76781 | overlap 2018669 2018670 AAAGAGGTCACCAAA GCCTCA AAG CGAGGC ACAGCATCGACATCG ACIAD2029 2020255 - 2019245 - | N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase TERM 2364 2019283 - 2019273 - G 70 -5.4 -4.42062 | GATTCTTGAAACAAA CGTT GAT AACG ACGACATTGCTCAGC ACIAD2031 2021359 - 2020514 - | hypothetical protein TERM 2365 2022778 - 2022764 - g 85 -2.2 -5.81032 | GAAGCTTAAAAAAAA TAAAAA ACG CTTTTA TCACTATCTTAAGCA ACIAD2032 2021646 - 2023067 + | bifunctional transcriptional regulator/ATP-binding protein TERM 2366 2023110 - 2023136 + T 100 -10.3 -5.47821 | gap 1, opp_overlap 2023110 TTATGCAACAAAAAA TGGCTTGG-GTA ACGA TACACCAAGCCA TTTTTTTAACTCACT TERM 2367 2023136 - 2023110 - T 100 -10.3 -5.4833 | gap 1, opp_overlap 2023110 TTATGCAACAAAAAA TGGCTTGG-GTA ACGA TACACCAAGCCA TTTTTTTAACTCACT ACIAD2034 2023742 - 2023161 - | putative signal peptide TERM 2368 2024032 - 2024001 - R 100 -16.2 -4.24404 | opp_overlap 2024010, overlap 2024010 ATCTAAAGGGTAAAA TATAAAAAAGCCCT TTAA AGGGCTTTTTTATA TAAAAACAATTAAGC TERM 2369 2024010 - 2024023 + r 90 -8.1 -5.36441 | opp_overlap 2024001 2024010 GTAAAATATAAAAAA GCCCT TTAA AGGGC TTTTTTATATAAAAA TERM 2370 2024023 - 2024010 - R 93 -8.1 -5.63645 | opp_overlap 2024010, overlap 2024001 GTAAAATATAAAAAA GCCCT TTAA AGGGC TTTTTTATATAAAAA tkt 2026030 - 2024042 - | transketolase TERM 2371 2026084 - 2026071 - H 70 -3.9 -4.92757 | TTAGGAAGAAGAAAA TGAAT CAGA ATTCA AACAGCGTCTATTGT metK 2026565 - 2027731 + | S-adenosylmethionine synthetase TERM 2372 2027771 - 2027740 - T 76 -9.6 -2.95073 | opp_overlap 2027741 2027748, overlap 2027748 TCTGTAAGATTAAAT TCAAAAAAGTCCGA TTTA TCGGACTTTTTTAT TTACATATAATTTAG TERM 2373 2027741 - 2027770 + T 90 -10.9 -3.75229 | opp_overlap 2027740 2027748, overlap 2027748 CTGTAAGATTAAATT CAAAAAAGTCCGA TTTA TCGGACTTTTTTA TTTACATATAATTTA TERM 2374 2027763 - 2027748 - T 95 -9 -5.22943 | opp_overlap 2027741 2027748, overlap 2027740 ATTAAATTCAAAAAA GTCCGA TTTA TCGGAC TTTTTTATTTACATA TERM 2375 2027748 - 2027763 + T 95 -9 -5.65927 | opp_overlap 2027748 2027740, overlap 2027741 ATTAAATTCAAAAAA GTCCGA TTTA TCGGAC TTTTTTATTTACATA ACIAD2038 2028056 - 2027805 - | hypothetical protein ACIAD2039 2028276 - 2028467 + | hypothetical protein TERM 2376 2028542 - 2028519 - T 100 -12.6 -5.73672 | AAATAATTAAAAAAA GCTGAATGAT ACAA ATCATTCAGC TCATAACAAGCAAAG ACIAD2040 2029132 - 2028566 - | putative suppressor of F exclusion of phage T7 (FxsA) TERM 2377 2029516 - 2029529 + G 72 -8.1 -3.78022 | GGCCAAGCCAGAGGT GCTGC AATT GCAGC TTTGGTCAATCTGGA ruvC 2029228 - 2029803 + | holliday junction nuclease ACIAD2042 2031281 - 2029809 - | hypothetical protein TERM 2378 2029946 - 2029934 - G 71 -4.9 -4.64048 | overlap 2029926 CATCAGACAAACAAA TTTGA TCA TCAAA CTGTGCTTTCAGGCT TERM 2379 2030516 - 2030503 - G 70 -5.9 -4.26076 | overlap 2030474 GCACCTGCATGAAAA GCCGC CTCT GCAGC CATAATCACAGCTCC TERM 2380 2032039 - 2032029 - g 74 -6.8 -4.24397 | ACAATTGAATATAAA GGGA TTA TCCC AGAAGAGTTGCGCGA ACIAD2043 2031282 - 2032412 + | putative ferredoxin bioB 2032479 - 2033492 + | biotin synthetase TERM 2381 2033537 - 2033503 - f 100 -16 -2.64794 | opp_overlap 2033508 2033510, overlap 2033508 2033510 CTTAAGTTCAGACGA TAAAATAGCCCTCAAA TAA TTTGAGGGCTGTTTTA TATCGATGTCACTAA TERM 2382 2033532 - 2033508 - f 100 -11.5 -4.50976 | opp_overlap 2033508 2033510, overlap 2033503 2033510 GTTCAGACGATAAAA TAGCCCTCAAA TAA TTTGAGGGCTG TTTTATATCGATGTC TERM 2383 2033508 - 2033532 + F 100 -13.7 -4.56358 | opp_overlap 2033508 2033503 2033510, overlap 2033510 GTTCAGACGATAAAA TAGCCCTCAAA TAA TTTGAGGGCTG TTTTATATCGATGTC TERM 2384 2033510 - 2033530 + F 100 -14.1 -3.88698 | opp_overlap 2033508 2033503 2033510, overlap 2033508 TCAGACGATAAAATA GCCCTCAAA TAA TTTGAGGGC TGTTTTATATCGATG TERM 2385 2033530 - 2033510 - f 100 -14.1 -3.8637 | opp_overlap 2033510 2033508, overlap 2033508 2033503 TCAGACGATAAAATA GCCCTCAAA TAA TTTGAGGGC TGTTTTATATCGATG TERM 2386 2034342 - 2034306 - f 76 -4.2 -5.10163 | gap 2, opp_overlap 2034294 2034309 2034309 2034311, overlap 2034294 2034309 2034310 2034311 AACTCCAAAATAAAA TAATTTGGATATTTATTA TAA TAATAAATATCC-A-TTA ATTTTTTTTAATTAT TERM 2387 2034341 - 2034309 - f 76 -6.5 -4.6313 | opp_overlap 2034294 2034309 2034309 2034311, overlap 2034294 2034306 2034310 2034311 TCCAAAATAAAATAA TTTGGATATTTATTA TAA TAATAAATATCCATT AATTTTTTTTAATTA TERM 2388 2034309 - 2034343 + F 93 -3.3 -5.98781 | gap 2, opp_overlap 2034294 2034306 2034309 2034310 2034311, overlap 2034294 2034309 2034311 TCCAAAATAAAATAA TT--TGGATATTTATTA TAA TAATAAATATCCATTAA TTTTTTTTAATTATA TERM 2389 2034340 - 2034310 - f 81 -10 -3.36251 | opp_overlap 2034294 2034309 2034309 2034311, overlap 2034294 2034309 2034306 2034311 CCAAAATAAAATAAT TTGGATATTTATTA TAA TAATAAATATCCAT TAATTTTTTTTAATT TERM 2390 2034339 - 2034311 - f 89 -13.5 -2.60124 | opp_overlap 2034294 2034311 2034309 2034309, overlap 2034294 2034310 2034309 2034306 CAAAATAAAATAATT TGGATATTTATTA TAA TAATAAATATCCA TTAATTTTTTTTAAT TERM 2391 2034311 - 2034339 + F 100 -13.5 -4.14345 | opp_overlap 2034294 2034310 2034309 2034306 2034311, overlap 2034294 2034309 2034309 CAAAATAAAATAATT TGGATATTTATTA TAA TAATAAATATCCA TTAATTTTTTTTAAT TERM 2392 2034789 - 2034815 + F 100 -8.1 -5.88197 | opp_overlap 2034789 2034788 2034786 CACCATACAAAACAT CCACTTAGG TGTACTAAT CCTAAGTGG TTTTTTTATGTTTGA ACIAD2048 2035753 - 2036298 + | putative bacterioferritin (cytochrome b1) ACIAD2049 2036574 - 2038742 + | putative ferric siderophore receptor protein TERM 2393 2038753 - 2038784 + F 95 -14.6 -3.11292 | opp_overlap 2038758, overlap 2038758 ATTAATCTAATAATT TAAAACTGGCGCAA TCAT TTGCGCCAGTTTTC CTTTATCTTAAGAGT TERM 2394 2038779 - 2038758 - f 100 -14.5 -4.36127 | opp_overlap 2038758 2038753 TCTAATAATTTAAAA CTGGCGCAA TCAT TTGCGCCAG TTTTCCTTTATCTTA TERM 2395 2038758 - 2038779 + F 100 -14.5 -4.67563 | opp_overlap 2038758, overlap 2038753 TCTAATAATTTAAAA CTGGCGCAA TCAT TTGCGCCAG TTTTCCTTTATCTTA ACIAD2050 2039140 - 2039688 + | putative acyltransferase ACIAD2052 2039854 - 2040603 + | hypothetical protein TERM 2396 2040620 - 2040652 + T 79 -10 -3.25603 | opp_overlap 2040620 2040629, overlap 2040622 2040629 ATTTGCTAAAAGTTA CATAAGAAACGCGC TTGAT GCGCGTTTTTTATA CTTTATTTAAAAGTT TERM 2397 2040652 - 2040620 - T 75 -10 -2.74784 | opp_overlap 2040620 2040622 2040629, overlap 2040629 ATTTGCTAAAAGTTA CATAAGAAACGCGC TTGAT GCGCGTTTTTTATA CTTTATTTAAAAGTT TERM 2398 2040622 - 2040650 + T 91 -12.6 -3.18452 | opp_overlap 2040620 2040629, overlap 2040620 2040629 TTGCTAAAAGTTACA TAAGAAACGCGC TTGAT GCGCGTTTTTTA TACTTTATTTAAAAG TERM 2399 2040629 - 2040643 + T 95 -8.5 -5.43621 | opp_overlap 2040620 2040629, overlap 2040622 2040620 AAGTTACATAAGAAA CGCGC TTGAT GCGCG TTTTTTATACTTTAT TERM 2400 2040643 - 2040629 - T 89 -8.5 -4.40601 | opp_overlap 2040629 2040622 2040620, overlap 2040620 AAGTTACATAAGAAA CGCGC TTGAT GCGCG TTTTTTATACTTTAT ACIAD2053 2041121 - 2040648 - | putative transcriptional regulator TERM 2401 2040819 - 2040805 - G 71 -4.2 -4.78839 | overlap 2040807 AACTCTAGAATAAAA TCGGCA CTC TGCCCA GTTACCAAAAAAGCA TERM 2402 2041473 - 2041483 + H 84 -4 -5.71983 | opp_overlap 2041473 ATGTAAATCCCAAAA GTAA GTT TTAC TTTTTTTATAATTAA ACIAD2054 2041532 - 2042944 + | hypothetical protein TERM 2403 2042971 - 2042986 + T 90 -8.2 -5.19261 | opp_overlap 2042963 2042971 TTAACATCAAAAAAA CCTCGC ATAT GCGGGG TTTTTTAATACGTTT TERM 2404 2042986 - 2042971 - T 88 -6 -5.63374 | opp_overlap 2042971, overlap 2042963 TTAACATCAAAAAAA CCTCGC ATAT GCGGGG TTTTTTAATACGTTT TERM 2405 2043224 - 2043243 + T 83 -7.8 -4.652 | opp_overlap 2043224 TCCTCTAAATAAAAA GCCCAATC ATTT GACTGGGC TTTTTAAGATAATTT TERM 2406 2043243 - 2043224 - T 100 -10 -5.27335 | opp_overlap 2043224 TCCTCTAAATAAAAA GCCCAATC ATTT GACTGGGC TTTTTAAGATAATTT gltL 2044013 - 2043270 - | glutamate/aspartate ABC transporter ATP-binding protein gltK 2044705 - 2044028 - | glutamate/aspartate ABC transporter membrane protein gltJ 2045409 - 2044708 - | glutamate/aspartate ABC transporter membrane protein TERM 2407 2045586 - 2045611 + r 100 -14.9 -5.626 | opp_overlap 2045577 2045582 TAAAAATACAGCTTA TGTACAGTGAG TAAC CTCACTGTACA TTTTTTTATGAGCTG gltI 2046545 - 2045652 - | glutamate/aspartate ABC transporter substrate-binding protein TERM 2408 2047148 - 2047105 - R 75 -7 -4.20354 | opp_overlap 2047092 2047105 2047109, overlap 2047092 AATCTAATTTTAAAA TAGATCTGATTTCTGA CCATACGCCAAC TCAGACATCAGATCTA TGAATTACTACATAC ACIAD2062 2047926 - 2047156 - | putative glutathione S-transferase TERM 2409 2048133 - 2048121 - H 84 -6.3 -5.11063 | opp_overlap 2048121 2048120 ATGATTTAACAAAAA CAGTA GGT TACTG ATTTAGATAGAATTA TERM 2410 2049038 - 2049050 + G 76 -7.7 -4.18058 | TATTGATGTCGGTAT TGCTG AAG CAGCA TTTTCAGATCTCATT ACIAD2064 2048256 - 2049491 + | putative Acyl-CoA dehydrogenase ACIAD2065 2049469 - 2050737 + | putative acyl-CoA dehydrogenase TERM 2411 2051829 - 2051816 - g 71 -2.3 -5.13521 | AAATGACTTAAAAAA CCAGC ATGT GCTTG GTGGTCGCTATCCAC ACIAD2066 2050737 - 2052149 + | putative monooxygenase metQ 2052165 - 2052998 + | D-methionine ABC transporter periplasmic substrate-binding protein metN 2053021 - 2054091 + | D-and L-methionine ABC transporter ATP-binding protein metI 2054072 - 2054731 + | D-and L-methionine ABC transporter membrane protein TERM 2412 2054754 - 2054777 + F 75 -8.2 -3.83998 | opp_overlap 2054753 TATGATTCACACCAT GCCATGAC CTGACTTT GTCATGGC TTTCATGTAAAATCA TERM 2413 2055352 - 2055333 - g 77 -5 -5.0538 | CCGTATTGGAAAAAA TTCAGCCA TTAC TGGATGAA GGCAAACCAGCACGA ACIAD2071 2054819 - 2055922 + | translation-associated GTPase TERM 2414 2055966 - 2055927 - f 100 -12.4 -5.055 | opp_overlap 2055939, overlap 2055929 2055938 TTAACGTTTAAAAAA TTTAATAAAAAGGCCAGC GAAA GCTGGCTTTTTTATTAGA AATACAAAAAATTAA TERM 2415 2055964 - 2055929 - f 95 -15 -2.76823 | opp_overlap 2055939, overlap 2055927 2055938 AACGTTTAAAAAATT TAATAAAAAGGCCAGC GAAA GCTGGCTTTTTTATTA GAAATACAAAAAATT TERM 2416 2055955 - 2055938 - f 88 -6.9 -5.17507 | opp_overlap 2055939, overlap 2055929 2055927 AAAATTTAATAAAAA GGCCAGC GAAA GCTGGCT TTTTTATTAGAAATA TERM 2417 2055939 - 2055954 + F 100 -10.4 -5.45652 | opp_overlap 2055938 2055929 2055927 AAATTTAATAAAAAG GCCAGC GAAA GCTGGC TTTTTTATTAGAAAT TERM 2418 2056008 - 2055990 - f 82 -3.2 -5.74086 | overlap 2055992 2055995 AAATTAAATAAAAAA GATAATAA TAA TGATTATC AATATATTTACATAA TERM 2419 2056308 - 2056295 - g 70 -3.9 -4.8048 | CGCCGACATCAAAAA TATTG TGAT CAATA ACGGTGGTGGTCATG sodM 2056089 - 2056700 + | superoxide dismutase ACIAD2074 2057053 - 2057280 + | hypothetical protein TERM 2420 2057296 - 2057323 + T 76 -10 -2.79878 | opp_overlap 2057301, overlap 2057301 AGTTCTAAGTGAACA AAAAAGCGAGAT TATA ATCTCGCTTTTA ATTTAGATGAATACA TERM 2421 2057318 - 2057301 - T 100 -9.9 -5.5074 | opp_overlap 2057301 2057296 TAAGTGAACAAAAAA GCGAGAT TATA ATCTCGC TTTTAATTTAGATGA TERM 2422 2057301 - 2057318 + T 100 -9.9 -4.56914 | opp_overlap 2057301, overlap 2057296 TAAGTGAACAAAAAA GCGAGAT TATA ATCTCGC TTTTAATTTAGATGA ACIAD2075 2057760 - 2057344 - | hypothetical protein TERM 2423 2058172 - 2058183 + G 71 -4.4 -4.88388 | opp_overlap 2058172 TTATATTTATCCAAA TGAC CGAA GTCA TTTTTATACCATTAT ACIAD2077 2058008 - 2058397 + | hypothetical protein TERM 2424 2058778 - 2058757 - g 73 -3.7 -5.0538 | opp_overlap 2058759, overlap 2058759 2058761 GTTGAGCTGAAAAAA CTGATTGAA AGCA TTCAACCTG ATTTAATTGTTCCAG purT 2058547 - 2059761 + | phosphoribosylglycinamide formyltransferase 2 TERM 2425 2062371 - 2062351 - g 95 -7.6 -5.14563 | TTTGTCACCAAAAAA GATGGTCA ACCGA TGACCACC GATGAAGCACATATT glnD 2059783 - 2062449 + | uridylyltransferase TERM 2426 2063440 - 2063430 - g 89 -6.8 -5.40474 | opp_overlap 2063430 2063429 ATTCCTCTAAAAAAA CCAG ATG CTGG ATTTTATTACTGGTT ACIAD2080 2062476 - 2063645 + | hypothetical protein TERM 2427 2063702 - 2063675 - T 100 -13.6 -4.36914 | opp_overlap 2063675 2063679, overlap 2063679 TGGTTTTGTAGAAAA TAAAGGCTCAGT TTCA ACTGAGCCTCTA TTTAAGTGGATTATC TERM 2428 2063675 - 2063702 + T 90 -11.4 -3.69333 | opp_overlap 2063675 2063679, overlap 2063679 TGGTTTTGTAGAAAA TAAAGGCTCAGT TTCA ACTGAGCCTCTA TTTAAGTGGATTATC TERM 2429 2063679 - 2063698 + T 89 -12.2 -3.27676 | opp_overlap 2063675 2063679, overlap 2063675 TTTGTAGAAAATAAA GGCTCAGT TTCA ACTGAGCC TCTATTTAAGTGGAT TERM 2430 2063698 - 2063679 - T 100 -12.2 -4.77173 | opp_overlap 2063679 2063675, overlap 2063675 TTTGTAGAAAATAAA GGCTCAGT TTCA ACTGAGCC TCTATTTAAGTGGAT ACIAD2081 2064123 - 2063713 - | hypothetical protein ACIAD2082 2066497 - 2064281 - | putative ferric siderophore receptor protein ACIAD2083 2067257 - 2066652 - | putative amino acid efflux protein, putative threonine efflux protein ACIAD2084 2068153 - 2067308 - | AraC family transcriptional regulator TERM 2431 2068113 - 2068088 - G 76 -10.5 -2.93207 | overlap 2068077 AATACGACTCATACA TGCCCTACGTG TTTC CACATAAGGCA TACGAGGATCGGTCC gpo 2068673 - 2068191 - | glutathione peroxidase msrB 2069089 - 2068670 - | peptide methionine sulfoxide reductase TERM 2432 2070011 - 2069995 - g 73 -5.1 -4.71828 | opp_overlap 2069995 2069998, overlap 2069990 2069998 ATGTGATGAAGAAAA TAGCTGG TAT CCAGATA TTGTCGATATGGAAA TERM 2433 2070440 - 2070453 + G 72 -8.1 -3.85698 | opp_overlap 2070433 ATTAATGACTTGATT CGTCC AAGC GGACG TTTATACGAGCAACG ACIAD2087 2069321 - 2070751 + | aminotransferase AlaT TERM 2434 2070767 - 2070789 + F 93 -7.8 -5.52347 | opp_overlap 2070767 TTAAGAAAATTTAAA GCAATGTC CTGCTTA GACATTGC TTTTTTCATTTTATT TERM 2435 2070789 - 2070767 - f 82 -8.5 -3.99986 | opp_overlap 2070767 TTAAGAAAATTTAAA GCAATGTCC TGCTT AGACATTGC TTTTTTCATTTTATT TERM 2436 2071426 - 2071413 - g 71 -3.1 -5.0133 | opp_overlap 2071413 GATCTTGTTAAAAAA CCATC TGTA AATGG TGTTGTGATTACACA aspQ 2071101 - 2072168 + | glutaminase-asparaginase TERM 2437 2072178 - 2072221 + F 100 -15.6 -3.2794 | opp_overlap 2072190, overlap 2072190 TATTAATTCTTAAGT TCCAAACAAAAAGCCGATGT ATTT ACATCGGCTTTTTGTTTTTA TTGCTCTGAATCAGG TERM 2438 2072209 - 2072190 - f 100 -12.2 -5.27938 | opp_overlap 2072178 2072190 AGTTCCAAACAAAAA GCCGATGT ATTT ACATCGGC TTTTTGTTTTTATTG TERM 2439 2072190 - 2072209 + F 100 -12.2 -5.74684 | opp_overlap 2072190, overlap 2072178 AGTTCCAAACAAAAA GCCGATGT ATTT ACATCGGC TTTTTGTTTTTATTG TERM 2440 2074670 - 2074681 + G 71 -4.4 -4.90266 | GAAATGCAAAATACG GACA GTAT TGTC TTTTTAATTGATGAC dnaE 2072315 - 2075878 + | DNA polymerase III, alpha chain ACIAD2090 2075934 - 2076749 + | putative tRNA/rRNA methyltransferase cysE 2076742 - 2077551 + | serine acetyltransferase TERM 2441 2078456 - 2078446 - g 78 -4 -5.1167 | overlap 2078454 AATGGAACAGAAAAA GAAT GCA ATTC AGACGCTGAAAAACT ACIAD2092 2077625 - 2078590 + | hypothetical protein TERM 2442 2078633 - 2078614 - f 80 -6.4 -4.73973 | opp_overlap 2078614 ATATAAAATAATAAA TAGGCTGT TTAG ACGGCCTA TTTTTTTGTTAGTTT TERM 2443 2078614 - 2078633 + F 100 -8.6 -5.9003 | opp_overlap 2078614 ATATAAAATAATAAA TAGGCTGT TTAG ACGGCCTA TTTTTTTGTTAGTTT ACIAD2094 2078801 - 2080723 + | hypothetical protein ACIAD2095 2081528 - 2080761 - | hypothetical protein TERM 2444 2081622 - 2081637 + H 74 -6.2 -4.53707 | opp_overlap 2081633 TGACCAATGTTTTTA TGTGAT GAAA ATCACA TTTTATGAATTTATT ACIAD2096 2081967 - 2083199 + | two-component response regulator ACIAD2097 2083257 - 2084057 + | hypothetical protein TERM 2445 2084055 - 2084065 + F 72 -2.6 -5.24129 | opp_overlap 2084055 TCGCTTTCAATAAAA TAAT TTA ATTA TTTTTTATAAAAAAG TERM 2446 2084080 - 2084099 + F 83 -6.4 -4.9218 | opp_overlap 2084080 ATTTTTTATAAAAAA GCAGGTTA AGAT TTACCTGC TTTTTGTCATAACTA TERM 2447 2084099 - 2084080 - f 85 -6.4 -5.24531 | opp_overlap 2084080 ATTTTTTATAAAAAA GCAGGTTA AGAT TTACCTGC TTTTTGTCATAACTA TERM 2448 2084403 - 2084423 + G 84 -2.6 -5.67063 | overlap 2084405 GAAACGCTGTTATAT TCTGGAAT CGATT ATTCCATA TTTTTTTATAATCCA TERM 2449 2084405 - 2084421 + G 70 -5.2 -4.47611 | overlap 2084403 AACGCTGTTATATTC TGGAAT CGATT ATTCCA TATTTTTTTATAATC ACIAD2098 2084295 - 2084951 + | hypothetical protein ACIAD2099 2085841 - 2085041 - | alpha/beta family hydrolase TERM 2450 2085936 - 2085924 - H 85 -4.1 -5.68438 | TCATCAAATAAAAAA CTGCT CTC AACAG ATTTTATAGCCATCT TERM 2451 2086885 - 2086900 + G 74 -6.8 -4.26079 | opp_overlap 2086885, overlap 2086898 CCATGTAAAAAAAAT CTGGGG TATT CCTCAG TTTTGGCTGGTTTGG ACIAD2100 2086076 - 2087749 + | major facilitator superfamily permease TERM 2452 2087798 - 2087751 - T 89 -9.5 -4.20516 | opp_overlap 2087764, overlap 2087764 CTTTTATCCAATAAA TTAGATTAAAAAATACCTCCT GTAATA AGGAGGTATTTTTTAGTTCAA GCGATATTTAAAATC TERM 2453 2087785 - 2087764 - T 95 -8.8 -5.2422 | opp_overlap 2087764, overlap 2087751 AATTAGATTAAAAAA TACCTCCT GTAATA AGGAGGTA TTTTTTAGTTCAAGC TERM 2454 2087764 - 2087785 + T 95 -8.8 -5.26875 | opp_overlap 2087751 2087764 AATTAGATTAAAAAA TACCTCCT GTAATA AGGAGGTA TTTTTTAGTTCAAGC ACIAD2101 2088934 - 2087813 - | 3-oxoacyl-(acyl carrier protein) synthase III hrpA 2092804 - 2088950 - | ATP-dependent helicase TERM 2455 2091159 - 2091149 - G 70 -5.4 -4.55118 | CAATTTGAGATAAAA CAGA AAA TCTG AATCTGCTTCTTTAA TERM 2456 2091380 - 2091396 + g 72 -9.5 -3.22388 | TGCTTTTTGCTCACT TAGAGCT CCA AGCTCTA TTAGTAACTTGCGTC TERM 2457 2092864 - 2092876 + H 71 -3.4 -5.20331 | GGGAATATAGCTGAA CGAA AGTGA TTCG TTTTATTTCTTGTTT ahpC 2093160 - 2093723 + | alkyl hydroperoxide reductase, C22 subunit, thioredoxin-like (detoxification of hydroperoxides) TERM 2458 2093740 - 2093775 + T 100 -10.8 -4.20981 | gap 1, opp_overlap 2093724 2093720 2093748, overlap 2093748 TTTTTAGATGTTATC TATAAAAATAGTCACCT TAT AGGTGGCTATTTTT-TA TTTGTAATTTATTCA TERM 2459 2093768 - 2093748 - T 90 -8.3 -4.87665 | opp_overlap 2093740 2093748, overlap 2093720 TGTTATCTATAAAAA TAGTCACCT TAT AGGTGGCTA TTTTTTATTTGTAAT TERM 2460 2093748 - 2093768 + T 100 -10.5 -5.73978 | opp_overlap 2093720 2093748, overlap 2093740 TGTTATCTATAAAAA TAGTCACCT TAT AGGTGGCTA TTTTTTATTTGTAAT TERM 2461 2093909 - 2093895 - T 100 -11.4 -5.1675 | opp_overlap 2093895 TTATCCATTAAAAAA GCCCGT TAT ACGGGC TTTTCTGCAACATCT TERM 2462 2093895 - 2093909 + T 100 -11.4 -4.38154 | opp_overlap 2093895 TTATCCATTAAAAAA GCCCGT TAT ACGGGC TTTTCTGCAACATCT TERM 2463 2094231 - 2094196 - T 93 -8.5 -4.82154 | gap 1, opp_overlap 2094199 2094201, overlap 2094199 2094201 2094213 AATCTAGAGCAAAAA TAATC-GGGCTTTGAA TATAT TTCAAAGCCCTGATTT AAAATAAACCTTGTC TERM 2464 2094228 - 2094199 - T 100 -10.2 -4.50988 | gap 1, opp_overlap 2094199 2094201, overlap 2094196 2094201 2094213 CTAGAGCAAAAATAA TC-GGGCTTTGAA TATAT TTCAAAGCCCTGA TTTAAAATAAACCTT TERM 2465 2094199 - 2094228 + T 86 -10.2 -3.60475 | gap 1, opp_overlap 2094196 2094199 2094201 2094213, overlap 2094201 CTAGAGCAAAAATAA TC-GGGCTTTGAA TATAT TTCAAAGCCCTGA TTTAAAATAAACCTT TERM 2466 2094201 - 2094225 + T 87 -13 -2.92613 | opp_overlap 2094201 2094199 2094196 2094213, overlap 2094199 AGAGCAAAAATAATC GGGCTTTGAA TATAT TTCAAAGCCC TGATTTAAAATAAAC TERM 2467 2094225 - 2094201 - T 87 -13 -2.5662 | opp_overlap 2094199 2094201, overlap 2094199 2094196 2094213 AGAGCAAAAATAATC GGGCTTTGAA TATAT TTCAAAGCCC TGATTTAAAATAAAC ACIAD2104 2095049 - 2094267 - | short chain dehydrogenase ACIAD2105 2095737 - 2095069 - | hypothetical protein ACIAD2106 2097201 - 2095750 - | putative long-chain-fatty-acid-CoA ligase TERM 2468 2096865 - 2096853 - G 77 -6.3 -4.65933 | opp_overlap 2096859, overlap 2096840 2096859 CATCCTTAAAATAAA GATCA AGA TGATC CAAATTTAGATTATC ACIAD2107 2097877 - 2097191 - | hypothetical protein ACIAD2108 2098247 - 2098609 + | hypothetical protein TERM 2469 2098656 - 2098627 - T 95 -8.7 -5.53288 | TTTAATTCAAAAAAA TACGGCATGAG TACAAAAC CTCATGCCATA TACGCTAAAATTATT ACIAD2109 2099018 - 2098674 - | hypothetical protein TERM 2470 2099048 - 2099079 + H 73 -9.5 -2.88945 | opp_overlap 2099048, overlap 2099047 GAGCAATTTAATTAA CCTTTCCCCTAGA ACCCGC TCTAGGGGGAAAG ATTCTTATACATCAC TERM 2471 2099079 - 2099048 - H 85 -10.2 -3.41234 | opp_overlap 2099047 2099048 GAGCAATTTAATTAA CCTTTCCCCTAGAA CCCG CTCTAGGGGGAAAG ATTCTTATACATCAC ACIAD2110 2099628 - 2100095 + | hypothetical protein ACIAD2111 2100359 - 2100099 - | hypothetical protein ACIAD2113 2100866 - 2101435 + | hypothetical protein ACIAD2114 2101964 - 2101515 - | hypothetical protein ACIAD2115 2102241 - 2102110 - | hypothetical protein TERM 2472 2102400 - 2102373 - R 89 -7.8 -5.28176 | opp_overlap 2102375 TCTATCCATAAAAAA CCGAAAACCCGA TGGA TCAAATTTTCGG TTTTTCTAAATTAAA ACIAD2116 2104636 - 2102429 - | putative ferric siderophore receptor protein TERM 2473 2104484 - 2104503 + g 74 -6.4 -4.46581 | AATACTTTTAGGCGT TCGTGTTG CAGT CATCACGA TTTTATCAAGTTTTG ACIAD2117 2105366 - 2104707 - | putative siderophore biosynthese protein; putative acetyltransferase TERM 2474 2104948 - 2104965 + gr 80 -2.7 -5.44721 | opp_overlap 2104926 2104948, overlap 2104926 ATAACAGCACGAAAA TGTCCTT TTCC AACGACA TTTTTTTCACCTAAT ACIAD2118 2105958 - 2105332 - | putative demethylmenaquinone methyltransferase ACIAD2119 2106764 - 2105943 - | hypothetical protein ACIAD2120 2108696 - 2106771 - | hypothetical protein ACIAD2121 2110531 - 2108681 - | hypothetical protein ACIAD2122 2112003 - 2110549 - | MFS superfamily multidrug resistance protein TERM 2475 2111817 - 2111789 - G 82 -10.4 -3.72968 | overlap 2111790 AGCAGCAGACTTAAA CTCATGGCCAGT AAAAA ACTGACCATGAA CCAGCTCACAGCCGC TERM 2476 2111816 - 2111790 - G 81 -11.7 -2.83299 | overlap 2111789 GCAGCAGACTTAAAC TCATGGCCAGT AAAAA ACTGACCATGA ACCAGCTCACAGCCG ACIAD2123 2113419 - 2112007 - | putative lysine/ornithine N-monooxygenase TERM 2477 2112076 - 2112092 + g 70 -2.9 -4.9792 | opp_overlap 2112076 AAAGTGCAAGAACAT GTCCTCA GAC TGAGAGC TTTTTGTATGACGTA ACIAD2124 2115208 - 2113412 - | putative siderophore biosynthesis protein ACIAD2125 2116367 - 2115918 - | hypothetical protein TERM 2478 2116395 - 2116405 + H 71 -5.4 -4.55544 | opp_overlap 2116395 GCTCATAGCAGTAAC TCGA AAA TCGA TTTTGATTGTATATT ACIAD2126 2116552 - 2116839 + | hypothetical protein TERM 2479 2117068 - 2117038 - T 73 -4.2 -4.8743 | gap 1, opp_overlap 2117043 2117051, overlap 2117043 GGTAAAACAAAGAAA TAAAC-CTAAGCA TCACTT TGCTCAGTGTTTA CTGTGACCATTGGTA TERM 2480 2117369 - 2117355 - T 89 -7.1 -5.22039 | opp_overlap 2117355 2117354 TCTAAACTTAAAAAA CCGTC ATTTA GACGG CCTTTGTTTCACATC TERM 2481 2118759 - 2118730 - T 100 -11.7 -5.19261 | opp_overlap 2118735, overlap 2118735 AAAGGTATTAAAAAA TAAAAGTGGAAAA CTAA TTTTCCACTTTCA AATTAAATATAAAGG TERM 2482 2118735 - 2118754 + T 80 -9.4 -3.67417 | opp_overlap 2118735 2118730 TATTAAAAAATAAAA GTGGAAAA CTAA TTTTCCAC TTTCAAATTAAATAT TERM 2483 2118754 - 2118735 - T 100 -9.4 -5.45813 | opp_overlap 2118735, overlap 2118730 TATTAAAAAATAAAA GTGGAAAA CTAA TTTTCCAC TTTCAAATTAAATAT ACIAD2129 2119298 - 2118807 - | hypothetical protein TERM 2484 2118977 - 2118959 - G 71 -6.8 -4.07885 | opp_overlap 2118959, overlap 2118961 TATCCTTGTGGAAAA TAGCATAT TTC ATATGCCA TTTAGAAAATAATTT TERM 2485 2119662 - 2119648 - H 72 -5 -4.66833 | TTTGAACTGTAAAAA CCTTCT TTA AAAAGG GCTCTTTGCTGTAAA ACIAD2130 2119701 - 2119871 + | hypothetical protein ACIAD2131 2119958 - 2120098 + | hypothetical protein TERM 2486 2120262 - 2120245 - T 89 -3.3 -5.83211 | TACTAAAACAAAAAA CCCACCT GATG AGGGGAG GTTTAAGTTACTGAT TERM 2487 2120553 - 2120540 - T 93 -8.1 -5.69793 | opp_overlap 2120540 AGATTAAATAAAAAA CCACC CGAA GGTGG TTTGTGGTTTGTGGT TERM 2488 2120540 - 2120553 + T 81 -8.1 -4.18303 | opp_overlap 2120540 AGATTAAATAAAAAA CCACC CGAA GGTGG TTTGTGGTTTGTGGT ACIAD2132 2121240 - 2120608 - | hypothetical protein TERM 2489 2121114 - 2121101 - G 100 -3.9 -6.06723 | CCTTGTAAAAAAAAA TCATT TTTA AATGA ACTAAATGGATCTTG TERM 2490 2121144 - 2121154 + g 73 -2.6 -5.19212 | GAGTTATTTTTCCAT TTTT AAT AAAA TTTTTTAATGCTACT ACIAD2133 2121590 - 2121258 - | hypothetical protein TERM 2491 2121399 - 2121418 + g 70 -5.8 -4.26903 | gap 1, opp_overlap 2121398 2121399 TGTGGCATAAGATAC CG-CAGAAA AAG TTTCTGGCG TTTTACTCAAATCCA ACIAD2134 2122300 - 2121584 - | hypothetical protein TERM 2492 2122548 - 2122535 - R 90 -8.1 -4.98255 | opp_overlap 2122526 2122545 GCTTAATGATAAAAA CCACC CGAA GGTGG TAAATATCACTTTTT ACIAD2135 2122806 - 2122555 - | hypothetical protein ACIAD2136 2123123 - 2122803 - | hypothetical protein ACIAD2137 2123923 - 2123198 - | putative DNA-binding protein (Roi) TERM 2493 2123802 - 2123774 - G 75 -5.9 -4.62783 | opp_overlap 2123777, overlap 2123777 GATTGAGTTTAAAAA TGACGTTTCCACC ATT GGGGGAAGCGTTA TAACCCCTTTTTCTG TERM 2494 2123777 - 2123799 + g 76 -9.8 -3.3341 | opp_overlap 2123777 2123774 TGAGTTTAAAAATGA CGTTTCCACC ATT GGGGGAAGCG TTATAACCCCTTTTT TERM 2495 2124092 - 2124140 + H 85 -10.5 -3.35679 | opp_overlap 2124094 2124097 2124122 2124127 2124128, overlap 2124097 ATTATTGCTCCAATT TAGAACCACCGTGGTTCATAT GAATTAA ATTTAAACCACCGTGGTTCTA TTGTCAATACCACCG TERM 2496 2124138 - 2124094 - H 80 -10.9 -2.52676 | opp_overlap 2124092 2124097, overlap 2124097 2124122 2124127 2124128 TATTGCTCCAATTTA GAACCACCGTGGTTCATAT GAATTAA ATTTAAACCACCGTGGTTC TATTGTCAATACCAC ACIAD2139 2124196 - 2124609 + | phage regulatory protein TERM 2497 2124628 - 2124649 + T 81 -10.9 -2.69647 | opp_overlap 2124628, overlap 2124623 ACATTCATAGAAAAA GCCTCATCG TGGG TGATGAGGC TAGTATGGGTTTGTT TERM 2498 2124649 - 2124628 - T 100 -10.2 -4.99638 | opp_overlap 2124623 2124628 ACATTCATAGAAAAA GCCTCATC GTGGGT GATGAGGC TAGTATGGGTTTGTT ACIAD2140 2125659 - 2124745 - | hypothetical protein TERM 2499 2125021 - 2125045 + g 89 -3.7 -5.64006 | opp_overlap 2125025 TGATGCCCAATTTAA TAAATCTTTTT TAG ATAAAGATTTG TTTTTTTCATTAAAT TERM 2500 2125772 - 2125759 - R 90 -8.1 -5.10933 | CTAGGTAAAAGAAAA CCCAC CGAA GTGGG TCTAACCAAAATACT ACIAD2142 2127281 - 2125908 - | hypothetical protein TERM 2501 2126722 - 2126732 + g 79 -3.2 -5.39905 | overlap 2126715 AGATTTGCCCTATTA GTGT AAT ACGC TTTTTCTTCTTTACT ACIAD2143 2127544 - 2127819 + | hypothetical protein TERM 2502 2128270 - 2128282 + G 72 -7.7 -3.8372 | TTAAACTGATTCCAG CCGAA GCA TTCGG TTATCTTATTGCAAT ACIAD2144 2128146 - 2128739 + | putative threonine efflux protein ACIAD2145 2129357 - 2128812 - | hypothetical protein TERM 2503 2129366 - 2129350 - G 100 -5.8 -6.02914 | TCCAGATAAAAAAAA GCCCAC AGAAA GTGAGC ACGAGATAATTTTGT ACIAD2146 2129788 - 2129384 - | hypothetical protein TERM 2504 2129816 - 2129801 - R 100 -10.4 -5.5074 | opp_overlap 2129800 2129801 CAAGGCAATAAAAAA CCGCCA GTAT TGGCGG CTTCGTTGTTGAAGT TERM 2505 2129801 - 2129816 + r 78 -10.4 -2.72013 | opp_overlap 2129801, overlap 2129800 CAAGGCAATAAAAAA CCGCCA GTAT TGGCGG CTTCGTTGTTGAAGT ACIAD2148 2132325 - 2129836 - | hypothetical protein TERM 2506 2132368 - 2132352 - R 71 -5.7 -4.55023 | CTTAATACGATAAAA CCCGACG ATT CGCTGGG CTAAACTTCCTTTTG ACIAD2149 2132768 - 2132328 - | putative cell wall-associated hydrolase TERM 2507 2132789 - 2132776 - R 77 -3.1 -5.4505 | gap 1, opp_overlap 2132776 TTTGGCAATAAAAAA GCC-CA AAC TGCGGC TTATGATTAAACAAA ACIAD2151 2133003 - 2132812 - | hypothetical protein ACIAD2152 2134631 - 2133000 - | hypothetical protein TERM 2508 2134569 - 2134580 + g 70 -3.6 -4.84311 | AGAGACACCAGCTTG CGGG AATA CTCG TTTTGTTGTATCGAC ACIAD2153 2136793 - 2134643 - | hypothetical protein TERM 2509 2136833 - 2136818 - R 100 -10.4 -5.79595 | opp_overlap 2136817 CCTCAAAACAAAAAA CCTCGC AAAT GCGAGG CTTGGATTCAAAAAT ACIAD2154 2137714 - 2136857 - | hypothetical protein ACIAD2155 2138352 - 2137711 - | hypothetical protein ACIAD2156 2141886 - 2138362 - | phage tail tape meausure protein TERM 2510 2140709 - 2140725 + g 74 -4.3 -5.04385 | TAGAATGTCATCTCA GCTTGCG ATA CGTTAGC TTTTTTCAGCGTCTC TERM 2511 2141985 - 2141970 - R 100 -10.4 -5.52384 | opp_overlap 2141970 TTTTTATTAAAAAAA CCCGCT CATG AGCGGG TTTATTTAGATCAAT TERM 2512 2141970 - 2141985 + r 100 -10.4 -4.46514 | opp_overlap 2141970 TTTTTATTAAAAAAA CCCGCT CATG AGCGGG TTTATTTAGATCAAT ACIAD2157 2143055 - 2142009 - | hypothetical protein ACIAD2158 2143377 - 2143129 - | hypothetical protein ACIAD2159 2143724 - 2143389 - | hypothetical protein ACIAD2160 2144473 - 2143706 - | hypothetical protein TERM 2513 2144513 - 2144498 - R 83 -7.5 -4.72556 | TTAAAAATGAGAAAA CCGCC ATGAAA GGCGG CCATAAAGTATTTTA ACIAD2161 2144976 - 2144533 - | hypothetical protein ACIAD2162 2145448 - 2144966 - | hypothetical protein ACIAD2164 2146040 - 2145660 - | hypothetical protein TERM 2514 2145817 - 2145771 - G 74 -6.7 -4.36914 | overlap 2145773 GCTCTGGTTATAAAA CG-TTTCAGTGTTAGAGCGCGAA TAA CTCACGCTCTGAC-CTGCAATCG TCATAATTGAAGCAT ACIAD2165 2146428 - 2146048 - | hypothetical protein TERM 2515 2146406 - 2146391 - G 95 -7.5 -5.49579 | CCAGAAAAAACAAAA GCGGC ATTAGA GCCGC TATAGAGATAAGAAT ACIAD2166 2147416 - 2146442 - | hypothetical protein ACIAD2167 2147896 - 2147423 - | hypothetical protein ACIAD2168 2149119 - 2147908 - | putative phage-like protein TERM 2516 2148882 - 2148906 + g 70 -7.9 -3.67296 | CGGTAAGATCCACAT CCTGAAAGC TGCTGAT GCTTTCGGG TTTAAATAGCTCATC TERM 2517 2149131 - 2149164 + r 79 -5.3 -5.0925 | opp_overlap 2149124 2149140, overlap 2149133 2149135 2149140 TCATAAATTGGGCTC AATAAAAAACCCACC GTGT GGTGGGTTTTATAGA TTTTTGATTTTAAGA TERM 2518 2149133 - 2149162 + r 86 -12.3 -2.77595 | opp_overlap 2149124 2149140, overlap 2149131 2149135 2149140 ATAAATTGGGCTCAA TAAAAAACCCACC GTGT GGTGGGTTTTATA GATTTTTGATTTTAA TERM 2519 2149135 - 2149160 + r 79 -10.5 -2.91298 | opp_overlap 2149124 2149140, overlap 2149133 2149131 2149140 AAATTGGGCTCAATA AAAAACCCACC GTGT GGTGGGTTTTA TAGATTTTTGATTTT TERM 2520 2149140 - 2149155 + r 100 -10.4 -4.56887 | opp_overlap 2149124 2149140, overlap 2149135 2149133 2149131 GGGCTCAATAAAAAA CCCACC GTGT GGTGGG TTTTATAGATTTTTG TERM 2521 2149155 - 2149140 - R 100 -10.4 -5.4505 | opp_overlap 2149140 2149135 2149133 2149131, overlap 2149124 GGGCTCAATAAAAAA CCCACC GTGT GGTGGG TTTTATAGATTTTTG TERM 2522 2149178 - 2149193 + r 83 -6.2 -5.14965 | opp_overlap 2149180 GATTTTTGATTTTAA GATATG GACT CATATC TTTTTTGATACGCAT ACIAD2169 2149470 - 2149174 - | hypothetical protein ACIAD2170 2150094 - 2149543 - | putative phage anti-repressor protein TERM 2523 2150200 - 2150236 + H 79 -3.8 -5.50499 | gap 1, opp_overlap 2150199 2150200 2150202, overlap 2150202 CCCACTCATATAAAT CATCAGGAATACGCAAT TTGA ATTGC-TGTCCCTGACG TTTTTTTAACTCTGA TERM 2524 2150281 - 2150295 + H 75 -8.6 -3.35001 | opp_overlap 2150281, overlap 2150280 2150291 CATTGGTTTTTAAAA GTACCT CTT AGGTAC ATTTTATATACTGTA TERM 2525 2150295 - 2150281 - H 82 -8.6 -4.07885 | opp_overlap 2150281 2150280 2150291 CATTGGTTTTTAAAA GTACCT CTT AGGTAC ATTTTATATACTGTA TERM 2526 2150308 - 2150346 + H 71 -5.5 -4.5002 | gap 1, overlap 2150291 TACATTTTATATACT GTACCTCTTGG-TG ACCATTGTCAAG CACCCAAGAGGTAC TTTATTATGTATTTT ACIAD2172 2150390 - 2150647 + | phage regulatory protein ACIAD2173 2151375 - 2150656 - | hypothetical protein ACIAD2174 2152750 - 2151419 - | putative phage-like protein TERM 2527 2152303 - 2152318 + g 80 -6.2 -4.85782 | overlap 2152291 GTAGATAAGTATTTT TATCTG CTCT CAGATA TTTCTTTTTGAGCAC ACIAD2175 2154285 - 2152759 - | putative helicase ACIAD2176 2154739 - 2154263 - | hypothetical protein TERM 2528 2154799 - 2154786 - R 91 -4.5 -5.89827 | opp_overlap 2154786 AATGAGCAAAAAAAA GAGCC CGAA GACTC TACTTAATCAAACAC ACIAD2177 2155440 - 2154799 - | hypothetical protein ACIAD2178 2155876 - 2155409 - | hypothetical protein TERM 2529 2155588 - 2155604 + gr 73 -5.1 -4.66833 | CAACATCATAACGAT CAATGCT CCA AGCTTTG TTTTTAAGCTTACCC TERM 2530 2155912 - 2155898 - R 89 -7.1 -5.22039 | opp_overlap 2155898 2155897 CCTAAATTTAAAAAA CCGTC ATTTA GACGG CTTTTCATAACAATG ACIAD2179 2156157 - 2155945 - | hypothetical protein TERM 2531 2156257 - 2156275 + r 79 -4 -5.56372 | AATTCCTGTATCTAT TATTAAGA AAT TTTTAATA TTTTTATTTTCCTTT TERM 2532 2156365 - 2156338 - R 100 -15 -5.4505 | opp_overlap 2156338 GTCTTCAAGAAAAAA CCCCGCTAAATA TCGA TATTCAGCGGGG TTTCCTCTGCCGTAA TERM 2533 2156338 - 2156365 + r 95 -12.8 -3.83998 | opp_overlap 2156338 GTCTTCAAGAAAAAA CCCCGCTAAATA TCGA TATTCAGCGGGG TTTCCTCTGCCGTAA TERM 2534 2156453 - 2156436 - R 100 -7.7 -6.11229 | opp_overlap 2156436 ATTAAAACAAAAAAA GCCCATC AAAT GATGAGC TTTTTTTCAATCTAG TERM 2535 2156436 - 2156453 + r 84 -5.5 -5.50499 | opp_overlap 2156436 ATTAAAACAAAAAAA GCCCATC AAAT GATGAGC TTTTTTTCAATCTAG ACIAD2180 2156753 - 2156460 - | hypothetical protein TERM 2536 2156887 - 2156863 - R 100 -10.8 -4.12603 | opp_overlap 2156862 2156867, overlap 2156867 TCCACTAAATAACAA TAAAGCCCGC AATTA GCGAGCTTTA ATCATTGGTCATTTA TERM 2537 2156883 - 2156867 - R 80 -7.2 -4.62803 | opp_overlap 2156867 2156862, overlap 2156863 CTAAATAACAATAAA GCCCGC AATTA GCGAGC TTTAATCATTGGTCA TERM 2538 2156962 - 2156932 - R 70 -4.1 -4.74504 | gap 1, overlap 2156937 ACTGTAAGGTAAAAA TAACACTTG-CCTT GATC AAGGTCAAGAGCTA TCAGCGTAAAGCCAT ACIAD2181 2157292 - 2156963 - | putative proteic killer active protein ACIAD2182 2157601 - 2157305 - | putative proteic killer suppression protein ACIAD2183 2158579 - 2157677 - | hypothetical protein ACIAD2184 2159086 - 2158595 - | hypothetical protein ACIAD2185 2160462 - 2159134 - | putative replicative DNA helicase ACIAD2186 2161436 - 2160456 - | hypothetical protein TERM 2539 2160813 - 2160840 + g 82 -4.8 -5.38958 | overlap 2160818 ATTGGCTTGCTCAGG CACAGGTTCGTC GTTA GACGGACATATG TTTTTATTTATGGAT ACIAD2187 2161804 - 2161436 - | hypothetical protein TERM 2540 2161758 - 2161783 + g 100 -11.9 -5.65177 | AGTGTGGTTAATACG CCGCTTCTTGT TACT GCAAGAGGCGG TTTTTTTATGGGTGT ACIAD2188 2162238 - 2161789 - | putative bacteriophage protein (Gp55-like) ACIAD2189 2162508 - 2162263 - | hypothetical protein ACIAD2190 2162585 - 2163028 + | putative prophage transcriptional repressor ACIAD2191 2163033 - 2164049 + | hypothetical protein ACIAD2192 2164052 - 2165197 + | hypothetical protein ACIAD2193 2165169 - 2165858 + | hypothetical protein TERM 2541 2165896 - 2165913 + F 73 -7.1 -4.03234 | opp_overlap 2165896 ACCTATTGACTTAAA TATTAGG TATG CCTAATA TTTATCTCACAGACA TERM 2542 2165963 - 2165936 - f 79 -4.1 -5.27206 | opp_overlap 2165936 CACAGACAACAAAAA GCACCCCTG CCTTCGAACT CATGGGTGC TTTGCAAAACTGCGA ACIAD2194 2165956 - 2166411 + | hypothetical protein ACIAD2195 2166371 - 2166706 + | hypothetical protein TERM 2543 2166808 - 2166794 - gf 73 -4.2 -4.90778 | TTTATTGAAACAAAA TCAGGC ATG GCTTGA GGCTTGTTTAGAAAA ACIAD2196 2166648 - 2167442 + | hypothetical protein TERM 2544 2167502 - 2167475 - g 82 -8.4 -4.2461 | ACCCCGATGAAGAAA TCCACGGCGACT GAAA AGTTGCCACGGA TTAACCTGAATGATC ACIAD2197 2167439 - 2167849 + | hypothetical protein TERM 2545 2168144 - 2168132 - g 71 -3.3 -4.98255 | opp_overlap 2168133, overlap 2168133 GTTGAAGCAGAAAAA CCACC TCA GGTGT TTATCAATGAAGTCA TERM 2546 2168228 - 2168239 + G 70 -3.6 -4.78848 | opp_overlap 2168213, overlap 2168213 GTTGATGCAGCCTGG CTGC AAGA GCGG TTTTCTATTTCGCGC ACIAD2199 2168096 - 2168389 + | hypothetical protein TERM 2547 2168409 - 2168386 - T 74 -5.2 -4.74706 | opp_overlap 2168390, overlap 2168390 TGCAAGACGTAAAAA TTAAGGGAGC GATT GCTCCCTTTT CTTATTATGAAGCAT TERM 2548 2168390 - 2168405 + T 100 -10.4 -4.95547 | opp_overlap 2168386 2168390 AGACGTAAAAATTAA GGGAGC GATT GCTCCC TTTTCTTATTATGAA TERM 2549 2168405 - 2168390 - T 87 -10.4 -3.83644 | opp_overlap 2168390, overlap 2168386 AGACGTAAAAATTAA GGGAGC GATT GCTCCC TTTTCTTATTATGAA ACIAD2200 2169436 - 2168414 - | putative integrase/recombinase protein TERM 2550 2169491 - 2169476 - R 88 -7.6 -4.99861 | CACCAACGACAAAAA CCAAGT AAAA ACTTGG TGTCCACTTGGTGCT ACIAD2201 2171741 - 2169744 - | hypothetical protein TERM 2551 2170118 - 2170132 + g 80 -2.9 -5.5112 | CAGATCGAATTCCTA GTTTT GAGAA AAAAC TTTTTTGTTGATCAA ACIAD2202 2172648 - 2171743 - | hypothetical protein ACIAD2203 2173562 - 2172666 - | putative methanol dehydrogenase regulatory protein TERM 2552 2173544 - 2173532 - G 72 -7.7 -3.90048 | overlap 2173530 TTTCTTGTAAAAATA GCTCA ATT TGAGC AGAGTAACGAAATAT TERM 2553 2173670 - 2173647 - R 86 -5.3 -5.63517 | CCCTCAAATAAAAAA CGGCATATG AATCAA CATACACCG TTTTGCATTTTTTCT ACIAD2204 2173934 - 2173698 - | hypothetical protein cstA 2176105 - 2174000 - | starvation-induced protein involved in peptide utilization during carbon starvation TERM 2554 2176242 - 2176224 - R 95 -8.9 -5.60993 | opp_overlap 2176224 TTTGGCATAAAAAAA GGGTGAT TATTT ATCACCC TTCCATAATAGTCTA TERM 2555 2176224 - 2176242 + r 71 -8.9 -3.11192 | opp_overlap 2176224 TTTGGCATAAAAAAA GGGTGAT TATTT ATCACCC TTCCATAATAGTCTA efp 2176847 - 2176269 - | elongation factor P TERM 2556 2176875 - 2176893 + H 95 -9 -5.1287 | opp_overlap 2176878 CTAACTTAAATGTAT TAATGCTA GAC TAGCATTA TTTTTTCCGTGTCGC ACIAD2207 2176909 - 2177925 + | putative aminomutase ACIAD2208 2177944 - 2179653 + | hypothetical protein ACIAD2209 2179678 - 2181771 + | hypothetical protein TERM 2557 2181790 - 2181815 + T 80 -10.5 -3.13737 | opp_overlap 2181796, overlap 2181796 TTGAACTCCAGACAA AAAAAACGGGC TTTC GCCCGTTTTTA TACTTTTGGGTATTA TERM 2558 2181796 - 2181809 + T 100 -9.5 -5.09245 | opp_overlap 2181796, overlap 2181790 TCCAGACAAAAAAAA CGGGC TTTC GCCCG TTTTTATACTTTTGG TERM 2559 2181809 - 2181796 - T 100 -9.5 -6.02914 | opp_overlap 2181796 2181790 TCCAGACAAAAAAAA CGGGC TTTC GCCCG TTTTTATACTTTTGG rpmE 2182052 - 2181828 - | 50S ribosomal protein L31 ACIAD2212 2183289 - 2182255 - | Na+-dependent transporter TERM 2560 2182414 - 2182400 - G 71 -10 -2.64942 | overlap 2182399 2182398 CCTATGAATAAAATT TGTGCC ATA GGCACA CCACTGGCTAAGGTT TERM 2561 2183323 - 2183280 - G 100 -10.5 -5.42265 | opp_overlap 2183280 2183320 GTAAATTATAAAAAA CCAGTAACAAGCAATTTAC TGCATG GTAAATCGTATGTTACTGG TTTGATTAAATAAAT TERM 2562 2183280 - 2183323 + g 90 -11.2 -3.93556 | opp_overlap 2183280, overlap 2183320 GTAAATTATAAAAAA CCAGTAACAAGCAATTTACT GCAT GGTAAATCGTATGTTACTGG TTTGATTAAATAAAT gloA 2183792 - 2183391 - | lactoylglutathione lyase ACIAD2214 2185987 - 2183795 - | putative transporter TERM 2563 2186293 - 2186271 - g 76 -7 -4.54047 | GTACTTTAGAGAAAA CAGCACTTCA ACC TGAAAAGCTG ACACATATTCCACAA TERM 2564 2186392 - 2186409 + G 73 -8.4 -3.64487 | opp_overlap 2186381 GAAAGCCTCTGTTGA GGCAGG TATTTC CCTGCC TTATTCGGGCTATAA TERM 2565 2186776 - 2186790 + G 71 -4.3 -4.78753 | AAAACTCATTTCACG CAATG AAGAG CATTG TTTTGTTCCTGTTCA ACIAD2216 2186165 - 2188792 + | putative ATP-dependent protease TERM 2566 2188805 - 2188838 + T 90 -13.9 -3.05935 | opp_overlap 2188793 2188808 2188810 2188812, overlap 2188808 TAAGTATCTTGTATT ACAGACAGGTCAGCC ATTT GACTGACCTGTCTGC TTAAATAAGGACTCT TERM 2567 2188835 - 2188808 - T 100 -16.4 -2.78816 | opp_overlap 2188808 2188805, overlap 2188793 2188810 2188812 GTATCTTGTATTACA GACAGGTCAGCC ATTT GACTGACCTGTC TGCTTAAATAAGGAC TERM 2568 2188808 - 2188835 + T 93 -14.2 -2.75064 | opp_overlap 2188793 2188808 2188810 2188812, overlap 2188805 GTATCTTGTATTACA GACAGGTCAGCC ATTT GACTGACCTGTC TGCTTAAATAAGGAC TERM 2569 2188833 - 2188810 - T 87 -13.2 -2.94218 | opp_overlap 2188808 2188805, overlap 2188808 2188793 2188812 ATCTTGTATTACAGA CAGGTCAGCC ATTT GACTGACCTG TCTGCTTAAATAAGG TERM 2570 2188831 - 2188812 - T 77 -10 -3.02471 | opp_overlap 2188808 2188805, overlap 2188810 2188808 2188793 CTTGTATTACAGACA GGTCAGCC ATTT GACTGACC TGTCTGCTTAAATAA ACIAD2217 2189483 - 2188857 - | hypothetical protein TERM 2571 2189069 - 2189053 - G 78 -2.2 -5.50499 | overlap 2189054 TCATATTCAAAAAAA CGTGCA GATGA TGCACC CAAAATTGCTAAATC TERM 2572 2189200 - 2189218 + g 93 -8.9 -4.52897 | opp_overlap 2189200 2189199 TGATTCTCAAATAAT GTGCAGA ATAAA TCTGCAC TTTGTTCTTCATTGT ACIAD2218 2190297 - 2189515 - | hypothetical protein ACIAD2219 2190405 - 2191064 + | putative hydrolase pepD 2192637 - 2191174 - | aminoacyl-histidine dipeptidase (peptidase D) ACIAD2221 2193104 - 2192715 - | hypothetical protein TERM 2573 2193182 - 2193156 - R 100 -9.5 -4.69214 | gap 1, opp_overlap 2193154 2193156 TAGCCAATAAACAAA CAGCAGCCAAGC AAAA GCT-GACTGCTG TCTTTAATTTATGTT ACIAD2222 2195473 - 2193227 - | bifunctional prephenate or cyclohexadienyl dehydrogenase/3-phosphoshikimate 1-carboxyvinyltransferase pheA 2196688 - 2195579 - | bifuctional chorismate mutase P/prephenate dehydratase ACIAD2224 2196861 - 2197829 + | hypothetical protein TERM 2574 2198292 - 2198277 - g 71 -4 -4.84359 | GCATTTGTACAAAAA TTTGCA AATG CGCAAA AACCTATTTTTAGTA ACIAD2225 2197968 - 2198519 + | putative intracellular proteinase TERM 2575 2198557 - 2198521 - T 95 -13.2 -3.86015 | gap 1, opp_overlap 2198520, overlap 2198524 TATTGCGTCTATAAA CACGCTGGA-GCTGATA TTGT TATCAGCTTCCAGCACG CTGTATCGGTTTATA TERM 2576 2198554 - 2198524 - T 89 -13.5 -2.70946 | gap 1, opp_overlap 2198520, overlap 2198521 TGCGTCTATAAACAC GCTGGA-GCTGATA TTGT TATCAGCTTCCAGC ACGCTGTATCGGTTT ACIAD2226 2199719 - 2198574 - | putative acyl coenzyme A dehydrogenase (HcaD-like) TERM 2577 2198978 - 2198989 + g 73 -7.2 -4.21773 | opp_overlap 2198970, overlap 2198970 CACCTAACGCCGTTG CCGC AATT GCGG TTCTTTCTCTTGGCA TERM 2578 2199836 - 2199851 + r 100 -10.4 -5.22312 | opp_overlap 2199836 AGTCGGATAAAAAAA GGAGGC CGAA GCCTCC TTTTTTAATATAAAT TERM 2579 2199851 - 2199836 - R 100 -10.4 -5.61596 | opp_overlap 2199836 AGTCGGATAAAAAAA GGAGGC CGAA GCCTCC TTTTTTAATATAAAT dctA 2201227 - 2199881 - | C4-dicarboxylate transporter DctA TERM 2580 2199945 - 2199956 + g 74 -4.4 -4.99645 | opp_overlap 2199945 GCTGGATTATTCAAA GCTT CATC AAGC TTTTCTTTATCCAAT TERM 2581 2201298 - 2201280 - H 75 -4.7 -5.00138 | TATGCAAATGAAAAA TCTATAT TCTTG ATATAGA CAGCCCTTTAGTCCT TERM 2582 2202478 - 2202458 - g 71 -9.1 -3.26546 | overlap 2202460 GGAGAAATGTATGAA TATGAGCTT CCT AAGCTCACA CCAGAACGCTCACCA TERM 2583 2202476 - 2202460 - g 72 -9.5 -3.19178 | overlap 2202458 AGAAATGTATGAATA TGAGCTT CCT AAGCTCA CACCAGAACGCTCAC ACIAD2229 2201678 - 2202685 + | hypothetical protein ACIAD2230 2202978 - 2202718 - | hypothetical protein ppnK 2203898 - 2202975 - | inorganic polyphosphate/ATP-NAD kinase ACIAD2233 2204129 - 2204302 + | hypothetical protein mrcB 2204321 - 2206720 + | penicillin-binding protein 1B ACIAD2235 2206731 - 2207312 + | hypothetical protein TERM 2584 2207294 - 2207323 + T 72 -9.3 -2.61888 | opp_overlap 2207295, overlap 2207293 CCAGCAGGCACAACA AGCACTGAAGTCT CTCT AGACTTCAGCGCG ATATTTCAAAAATTT TERM 2585 2207322 - 2207295 - T 100 -15 -3.82824 | opp_overlap 2207294 2207293 CAGCAGGCACAACAA GCACTGAAGTCT CTCT AGACTTCAGCGC GATATTTCAAAAATT ACIAD2236 2208243 - 2207329 - | putative bifunctional dGTP-pyrophosphohydrolase/thiamine phosphate synthase TERM 2586 2207490 - 2207453 - G 73 -8.4 -3.65902 | opp_overlap 2207453 GCCATTTGAGCCAAA CCGTCCCATCCCAAAG TAACTG CTTCAGGATGTGTCGG TGTTGGCTGAACAGG TERM 2587 2208573 - 2208592 + r 100 -10.8 -5.58454 | opp_overlap 2208567 2208564 2208573 TCAAAATAATCTAAA CAGTATGG AATT CCATACTG TTTTTTTAATCTGAA TERM 2588 2208592 - 2208573 - R 93 -10.8 -3.92716 | opp_overlap 2208573, overlap 2208567 2208564 TCAAAATAATCTAAA CAGTATGG AATT CCATACTG TTTTTTTAATCTGAA ACIAD2238 2209947 - 2208598 - | putative two-component system sensor protein ACIAD2239 2210608 - 2209952 - | putative two-component response regulator TERM 2589 2210684 - 2210651 - R 100 -15.5 -5.09173 | overlap 2210652 CAATATTCTAAAAAA TTCACCGTATATCCT TTTC AGGATATACGGTGAT AGGCTACAAGACTGA TERM 2590 2210683 - 2210652 - R 100 -19 -3.6442 | overlap 2210651 AATATTCTAAAAAAT TCACCGTATATCCT TTTC AGGATATACGGTGA TAGGCTACAAGACTG ACIAD2240 2211096 - 2210716 - | putative signal peptide ACIAD2241 2212921 - 2211164 - | putative secretion pathway ATPase TERM 2591 2213100 - 2213082 - g 71 -4.6 -4.66609 | CATTTCATTTAAAAA TTTTCATG AAG CAGGAAAA GCGGTATTACATTTT TERM 2592 2213738 - 2213699 - g 81 -9.3 -3.86776 | gap 1, overlap 2213701 TAATGAATGATCAAA GAGGCCATGCCGAAGGAG ATCGG CTCCTCCAGCA-AGCCGC GACTATATTAAAAAA TERM 2593 2213736 - 2213701 - g 80 -10.5 -3.51124 | gap 1, overlap 2213699 ATGAATGATCAAAGA GGCCATGCCGAAGGAG ATCGG CTCCTCCAGCA-AGCC GCGACTATATTAAAA ACIAD2242 2213059 - 2213997 + | hypothetical protein ACIAD2243 2214728 - 2213994 - | hypothetical protein TERM 2594 2214508 - 2214522 + g 73 -2.8 -5.22006 | TGTGGGCGAAATCTT TCATCA TCT TGCTGA TTTTTATTGTCATGA fpr 2214826 - 2215605 + | ferredoxin--NADP+ reductase TERM 2595 2215613 - 2215656 + T 77 -10.6 -2.54233 | opp_overlap 2215626, overlap 2215626 AAAAGTAAGAAATTA CCGTTTAAAAAAACCGAGAA TAGT TTCTCGGTTTTTTTAAATTC AATTATTTTTGAAGT TERM 2596 2215626 - 2215643 + T 100 -9.9 -5.53288 | opp_overlap 2215626, overlap 2215613 TACCGTTTAAAAAAA CCGAGAA TAGT TTCTCGG TTTTTTTAAATTCAA TERM 2597 2215643 - 2215626 - T 100 -9.9 -5.41143 | opp_overlap 2215626 2215613 TACCGTTTAAAAAAA CCGAGAA TAGT TTCTCGG TTTTTTTAAATTCAA ACIAD2245 2216396 - 2215659 - | putative transcriptional regulator TERM 2598 2215990 - 2216000 + g 78 -2.4 -5.42164 | overlap 2215989 TCTTTGAGATTACCA GCGC TAC GCAC TTTTTCTTCTTTATC TERM 2599 2216561 - 2216541 - H 76 -2.7 -5.43329 | overlap 2216553 AAAAATAAAATAAAA TAATTTCAA ATA TTTAAATTA AAAATAACAAATTAC ACIAD2246 2216762 - 2217811 + | putative porin signal peptide protein ACIAD2247 2217862 - 2219328 + | putative permease TERM 2600 2219398 - 2219360 - f 73 -6.9 -3.98173 | opp_overlap 2219359 2219362, overlap 2219350 TCAAATCGAAGTAAA GACTTCCATAAACTTAT GATTG AAAAATTTGTGGAAGTC GCTTATCGCTTTAAA TERM 2601 2219560 - 2219544 - g 70 -2.9 -5.07107 | GAAAGTGCCAAAAAA GTTGCTG CAC CAACCAC CGAAATTATTGCTGT hyu 2219472 - 2220170 + | hydantoin-racemase TERM 2602 2220228 - 2220198 - T 73 -9.2 -2.93878 | opp_overlap 2220193 2220205, overlap 2220205 CAATATTGAATCATA TAAAAAACCAGATA CAT CATCTGGTTTTTAA AGTGACTTTGTGAAT TERM 2603 2220205 - 2220221 + T 76 -6.6 -4.63184 | opp_overlap 2220205 2220198, overlap 2220193 GAATCATATAAAAAA CCAGAT ACATC ATCTGG TTTTTAAAGTGACTT TERM 2604 2220221 - 2220205 - T 93 -7.3 -5.42131 | opp_overlap 2220193 2220205, overlap 2220198 GAATCATATAAAAAA CCAGATA CAT CATCTGG TTTTTAAAGTGACTT ACIAD2249 2221114 - 2220290 - | hypothetical protein TERM 2605 2221328 - 2221300 - R 93 -6.1 -5.9218 | gap 1 TACACAAGAAAAAAA GGAGCCTGA-CT GTTAGA AGATCAGACTCC GTAAAGTAAAGTAAA ahpF 2222997 - 2221393 - | alkyl hydroperoxide reductase subunit F (Alkyl hydroperoxide reductase F52A protein) TERM 2606 2221986 - 2222003 + g 74 -4.9 -4.86621 | gap 1 TTCTCCAGCGCGCAC CCGTCGAT AAA ATC-ACGG TTTTTGATTCAACCT ACIAD2251 2223981 - 2223070 - | hypothetical protein TERM 2607 2223894 - 2223913 + g 82 -5.6 -5.02074 | opp_overlap 2223894 CCACCATACTAAAAA GCGTCACC CGAT GTTGGCGC TTTTTTAAGAGATAC ACIAD2252 2225150 - 2224008 - | putative tellurique resistant protein (KlaB/TelA) ACIAD2254 2225941 - 2225150 - | putative tellurium resistant protein (KlaA/kilA) TERM 2608 2226186 - 2226199 + r 90 -8.1 -4.84359 | opp_overlap 2226186 TTAGGTATAAAAAAA GCTCC CTTA GGAGC TTTTTCTGAAACTAA TERM 2609 2226199 - 2226186 - R 93 -8.1 -5.64274 | opp_overlap 2226186 TTAGGTATAAAAAAA GCTCC CTTA GGAGC TTTTTCTGAAACTAA glyA 2227472 - 2226219 - | serine hydroxymethyltransferase TERM 2610 2227606 - 2227582 - R 95 -8.6 -4.88067 | opp_overlap 2227582 AGTTATGCATAAAAA TGGCTCATCC TGCGC GGATCAGCCA TTTTGCTATAAAAAA TERM 2611 2227582 - 2227606 + r 89 -8.6 -4.34402 | opp_overlap 2227582 AGTTATGCATAAAAA TGGCTCATCC TGCGC GGATCAGCCA TTTTGCTATAAAAAA ACIAD2256 2228848 - 2227628 - | hypothetical protein ACIAD2257 2229020 - 2229718 + | putative DNA exonuclease X TERM 2612 2230076 - 2230043 - f 83 -9.9 -3.78953 | opp_overlap 2230047, overlap 2230047 ATGCGTATGATGAAA TGAATTTCAGAAATA TGCA TATTTCTGAAATTTA TGGAAAGTATTGTTT TERM 2613 2230072 - 2230047 - f 89 -10.7 -3.58162 | opp_overlap 2230047, overlap 2230043 GTATGATGAAATGAA TTTCAGAAATA TGCA TATTTCTGAAA TTTATGGAAAGTATT TERM 2614 2230047 - 2230072 + F 90 -10.7 -3.87641 | opp_overlap 2230047 2230043 GTATGATGAAATGAA TTTCAGAAATA TGCA TATTTCTGAAA TTTATGGAAAGTATT TERM 2615 2230101 - 2230116 + F 95 -9 -5.42259 | TTGTTTAGCCCTTTA GCCCAT CTCG ATGGGC TTTTTTTACAAGTAA ACIAD2259 2230529 - 2231470 + | ABC transporter ATP-binding protein ACIAD2260 2231470 - 2232243 + | ABC transporter membrane protein queF 2232240 - 2233055 + | 7-cyano-7-deazaguanine reductase ACIAD2262 2233078 - 2233731 + | hypothetical protein TERM 2616 2233763 - 2233747 - f 84 -6.5 -5.12617 | opp_overlap 2233748, overlap 2233748 TAATGACTGAAAAAA GCCTGGA TTT TCCAGGT TTTTTTTATTGCAAA TERM 2617 2233748 - 2233762 + F 100 -10 -6.09888 | opp_overlap 2233748 2233747 AATGACTGAAAAAAG CCTGGA TTT TCCAGG TTTTTTTTATTGCAA TERM 2618 2233762 - 2233748 - f 82 -10 -3.66486 | opp_overlap 2233748, overlap 2233747 AATGACTGAAAAAAG CCTGGA TTT TCCAGG TTTTTTTTATTGCAA rodA 2233917 - 2234996 + | rod shape-determining protein mltB 2235034 - 2236035 + | membrane-bound lytic murein transglycosylase B ACIAD2265 2236319 - 2236933 + | putative lipoprotein precursor (RlpA-like) TERM 2619 2236958 - 2236987 + F 100 -14.5 -4.75372 | opp_overlap 2236962, overlap 2236962 2236966 CCCTCACATTTGCGA TAAAGAGACCACC ACTT GGTGGTTTCTTTA TTTTTAGTCGATAGT TERM 2620 2236962 - 2236983 + F 100 -10.9 -4.91852 | opp_overlap 2236962, overlap 2236958 2236966 CACATTTGCGATAAA GAGACCACC ACTT GGTGGTTTC TTTATTTTTAGTCGA TERM 2621 2236983 - 2236962 - f 79 -8.7 -3.87373 | opp_overlap 2236958 2236962 2236966 CACATTTGCGATAAA GAGACCACC ACTT GGTGGTTTC TTTATTTTTAGTCGA TERM 2622 2236966 - 2236979 + F 90 -8.1 -4.94811 | opp_overlap 2236962, overlap 2236962 2236958 TTTGCGATAAAGAGA CCACC ACTT GGTGG TTTCTTTATTTTTAG TERM 2623 2237179 - 2237166 - f 74 -6.7 -4.33165 | TCAAATTGATTAAAA GCTAC CCTA GTAGC AAAAAAAGATAAAAA TERM 2624 2237242 - 2237260 + F 77 -4.7 -5.10497 | AACAAAGTTTTTAGG TCATTTT TGCTC AAAATGA TTTTTTCAATAAATT ACIAD2266 2237397 - 2237855 + | hypothetical protein TERM 2625 2237892 - 2237866 - T 79 -8.1 -4.05402 | overlap 2237864 2237867 TTTGAACTAAAAATA TGAACCTATCA TTTAT TGATAGGTTCG ACCTTGGTAGCGCAA TERM 2626 2237891 - 2237867 - T 84 -11.6 -3.02518 | overlap 2237866 2237864 TTGAACTAAAAATAT GAACCTATCA TTTAT TGATAGGTTC GACCTTGGTAGCGCA ACIAD2267 2238360 - 2237878 - | hypothetical protein TERM 2627 2238414 - 2238385 - R 71 -8.7 -3.06399 | opp_overlap 2238393, overlap 2238393 CCTAATCAAACGATA TAAAAAAAGCTCC CGAA GGAGCTTTTTACA AAATAATCAATTATT TERM 2628 2238393 - 2238406 + r 84 -8.1 -4.58663 | opp_overlap 2238393 2238385 AACGATATAAAAAAA GCTCC CGAA GGAGC TTTTTACAAAATAAT TERM 2629 2238406 - 2238393 - R 93 -8.1 -5.75478 | opp_overlap 2238393, overlap 2238385 AACGATATAAAAAAA GCTCC CGAA GGAGC TTTTTACAAAATAAT tsf 2239300 - 2238425 - | elongation factor Ts TERM 2630 2239367 - 2239345 - R 100 -11.2 -5.75342 | opp_overlap 2239345 TCTTTTTAAAAAAAA CGGCCCAAGG AAA CTCTGGGCCG TTTGCTTTCTCGACG TERM 2631 2239345 - 2239367 + r 100 -11.2 -4.13995 | opp_overlap 2239345 TCTTTTTAAAAAAAA CGGCCCAAGG AAA CTCTGGGCCG TTTGCTTTCTCGACG rpsB 2240185 - 2239436 - | 30S ribosomal protein S2 TERM 2632 2239973 - 2239988 + g 80 -6.2 -4.90869 | opp_overlap 2239973 2239972 ACGCTTAGTACCAAC GAACAA AACT TTGTTC TTTTTGCTTGCTAAT TERM 2633 2240465 - 2240455 - g 75 -2.4 -5.25805 | AAGAAATTGAAAAAA TGCG TAT CGCG GGACGACTGGCAGCT map 2240454 - 2241218 + | methionine aminopeptidase TERM 2634 2241240 - 2241264 + F 100 -12.3 -4.65182 | opp_overlap 2241245, overlap 2241245 ATTTTCTAATGTGTA TAAAAGGTCAC TTT GTGGCCTTTTA TTTGTTTAATTTATA TERM 2635 2241245 - 2241259 + F 88 -7.8 -5.20222 | opp_overlap 2241245, overlap 2241240 CTAATGTGTATAAAA GGTCAC TTT GTGGCC TTTTATTTGTTTAAT ACIAD2272 2241417 - 2242544 + | hypothetical protein TERM 2636 2242579 - 2242566 - T 72 -8.1 -3.40403 | opp_overlap 2242566 2242577 CCCCCTTTATCAGAA GCAGC TTTG GCTGC TTTTTTCAGCATGGT TERM 2637 2242566 - 2242579 + T 90 -8.1 -5.03715 | opp_overlap 2242566, overlap 2242577 CCCCCTTTATCAGAA GCAGC TTTG GCTGC TTTTTTCAGCATGGT TERM 2638 2243176 - 2243159 - T 100 -12.7 -4.32201 | opp_overlap 2243159 TGAATCAACGCAAAA GCCCGTC AAAT GACGGGC TTTCTTTTATATGCT TERM 2639 2243159 - 2243176 + T 100 -12.7 -4.84146 | opp_overlap 2243159 TGAATCAACGCAAAA GCCCGTC AAAT GACGGGC TTTCTTTTATATGCT sthA 2244625 - 2243210 - | soluble pyridine nucleotide transhydrogenase lipA 2244827 - 2245840 + | lipoyl synthase TERM 2640 2245864 - 2245883 + F 100 -8.6 -5.77571 | opp_overlap 2245864 TTCTTATTTAGAAAA CCTCTCAA AACT TTGGGAGG TTTTTATTTTTTAGT TERM 2641 2245883 - 2245864 - f 74 -6.4 -4.42386 | opp_overlap 2245864 TTCTTATTTAGAAAA CCTCTCAA AACT TTGGGAGG TTTTTATTTTTTAGT fadE 2246152 - 2248641 + | acyl-CoA dehydrogenase TERM 2642 2248697 - 2248664 - f 100 -14.1 -3.39717 | opp_overlap 2248666 2248674, overlap 2248666 2248674 ATCTAGTAACATTAA TATGATAAAAGCGTC TTGG GACGCTTTTATCATT TGAACACTAAAATCA TERM 2643 2248695 - 2248666 - f 100 -16.7 -3.26531 | opp_overlap 2248666 2248674, overlap 2248664 2248674 CTAGTAACATTAATA TGATAAAAGCGTC TTGG GACGCTTTTATCA TTTGAACACTAAAAT TERM 2644 2248666 - 2248695 + F 100 -16.7 -3.55563 | opp_overlap 2248666 2248664 2248674, overlap 2248674 CTAGTAACATTAATA TGATAAAAGCGTC TTGG GACGCTTTTATCA TTTGAACACTAAAAT TERM 2645 2248687 - 2248674 - f 84 -8.1 -4.55625 | opp_overlap 2248666 2248674, overlap 2248666 2248664 ATTAATATGATAAAA GCGTC TTGG GACGC TTTTATCATTTGAAC TERM 2646 2248674 - 2248687 + F 84 -8.1 -4.61566 | opp_overlap 2248674 2248666 2248664, overlap 2248666 ATTAATATGATAAAA GCGTC TTGG GACGC TTTTATCATTTGAAC ACIAD2278 2248728 - 2249117 + | putative 4-carboxymuconolactone decarboxylase ACIAD2279 2250176 - 2249118 - | hypothetical protein TERM 2647 2249219 - 2249187 - G 74 -7.8 -4.06055 | gap 1, overlap 2249190 ATCTGCTAAAGCAAA CCATGCTGAGACTGT ATCA ACGGTCTCAGCA-GA AGCGATTCCAATACT TERM 2648 2249217 - 2249190 - G 95 -12.8 -3.0693 | overlap 2249187 TGCTAAAGCAAACCA TGCTGAGACTGT ATCA ACGGTCTCAGCA GAAGCGATTCCAATA TERM 2649 2250766 - 2250751 - g 70 -7.6 -3.58343 | TCGATGATGTTGAAA TTGTCG ATTA CGACAA GACCAAAAAAGCAAT TERM 2650 2250808 - 2250820 + G 74 -6.3 -4.41353 | overlap 2250805 CACTTGGTAATGCCA TCGAA TGG TTCGA TTTTGGTGTATATGG TERM 2651 2251653 - 2251663 + G 71 -2.4 -5.10933 | CTCAGTGACAAGATT GGCC GCC GCCC TTTTGTTTTCGCTGG TERM 2652 2252021 - 2252008 - g 71 -4.5 -4.68908 | TTTATCTAAAAGAAA CGGCA AACT TACCG TTGAAAGGTGCAACG proP 2250672 - 2252186 + | proline/glycine betaine transporter TERM 2653 2252194 - 2252222 + T 100 -13.4 -3.57387 | opp_overlap 2252199, overlap 2252199 TTGAATGATTATTTA TAAAAGTGGGTA AAATA TACCCACTTTTA TTTGCAAGATCTCTT TERM 2654 2252217 - 2252199 - T 89 -8.9 -4.43844 | opp_overlap 2252194 2252199 TGATTATTTATAAAA GTGGGTA AAATA TACCCAC TTTTATTTGCAAGAT TERM 2655 2252199 - 2252217 + T 95 -8.9 -4.87133 | opp_overlap 2252199, overlap 2252194 TGATTATTTATAAAA GTGGGTA AAATA TACCCAC TTTTATTTGCAAGAT ACIAD2281 2252818 - 2252276 - | hypothetical protein sahH 2253029 - 2254432 + | S-adenosyl-L-homocysteine hydrolase TERM 2656 2254441 - 2254464 + F 100 -9.6 -4.6635 | gap 1, opp_overlap 2254441 ATACTAAGATATGAA GGGCAGCGCTG TAA TAG-GCTGCCC TTTTCTTAAACATTT TERM 2657 2254464 - 2254441 - f 75 -8.9 -3.39353 | gap 1, opp_overlap 2254441 ATACTAAGATATGAA GGGCAGCGCT GTAAT AG-GCTGCCC TTTTCTTAAACATTT metF 2254505 - 2255341 + | 5,10-methylenetetrahydrofolate reductase ACIAD2284 2255364 - 2256095 + | hypothetical protein TERM 2658 2256575 - 2256585 + G 100 -4 -5.96219 | TAATCCTCATCTCAC GATT CAC AATC TTTTTTTTATAACTA ACIAD2286 2256438 - 2256701 + | hypothetical protein TERM 2659 2256870 - 2256859 - f 70 -4.4 -4.80882 | ATTTTATAGTAAAAA TTGG CGAC CCAA AGTATGAAACTCTTG ACIAD2287 2257214 - 2259484 + | malic enzyme TERM 2660 2259501 - 2259465 - f 73 -7.4 -3.86822 | opp_overlap 2259474 TAACTGTTGCAGAAA TTCAGCAAAGCGAAGG TTAAT CCTTTGCTTTATTGAA AAGCACAACTTTGTG TERM 2661 2259474 - 2259492 + F 71 -6.7 -4.15044 | opp_overlap 2259465 CAGAAATTCAGCAAA GCGAAGG TTAAT CCTTTGC TTTATTGAAAAGCAC TERM 2662 2259528 - 2259564 + F 79 -5.2 -5.14965 | gap 1, opp_overlap 2259528 TGTGACTTGTGAAAA CCTCTGTTCT-GTTGCA TGAT TGCTTTGAGAACAGAGG TTTTTTCATGCAAGT TERM 2663 2260129 - 2260113 - g 70 -5.1 -4.46112 | GGGTATGGAAAGAAA CATCACG CGC CCTGATG GAAGATCAAGCAGAT cca 2259572 - 2260813 + | multifunctional tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase TERM 2664 2260819 - 2260853 + F 100 -10.9 -5.29716 | opp_overlap 2260819 2260814 AACAGAATAAGAAAA GCGCCATGAAGTGAT AAGCA ATTATTTCATGGTGC TTTTTATTATATTAA TERM 2665 2260853 - 2260819 - f 73 -4.3 -4.99312 | opp_overlap 2260819, overlap 2260814 AACAGAATAAGAAAA GCGCCATGAAGTGAT AAGCA ATTATTTCATGGTGC TTTTTATTATATTAA TERM 2666 2261225 - 2261215 - f 73 -4 -5.03713 | opp_overlap 2261215 AACAATCAAATAAAA GATT TTA AATC ATACTTTTTTAGTGG TERM 2667 2261375 - 2261414 + F 93 -6.9 -5.61913 | opp_overlap 2261384, overlap 2261378 ATACTTATAAGCTAT TGATTAAAATAAAAATA ATAATA TATTTTTATTTTAATTG TTTTTTATGTTTATT TERM 2668 2261378 - 2261411 + F 93 -8.6 -4.8277 | opp_overlap 2261384, overlap 2261375 CTTATAAGCTATTGA TTAAAATAAAAATA ATAATA TATTTTTATTTTAA TTGTTTTTTATGTTT TERM 2669 2262443 - 2262433 - g 73 -5.4 -4.59773 | GGTGATGTTCAAAAA GCAA AAC TTGC CGCAATTGAATCGGA cydA 2261674 - 2263263 + | cytochrome d terminal oxidase, polypeptide subunit I TERM 2670 2263357 - 2263370 + G 71 -6.7 -4.15044 | TTGATATGGGCTCTA TGGCA ATTA TGCCA TTTGTTGGAAAAACC TERM 2671 2264015 - 2264004 - g 85 -4.4 -5.42259 | CCATTGGCAAAAAAA GTTG TGAC CAAC GCCAATGCTGGCTGG TERM 2672 2264291 - 2264301 + G 75 -5.4 -4.8543 | overlap 2264285 TGGAGTGATGACTGT TGCA GCC TGCA TTTTTGTACCGCTTA cydB 2263260 - 2264405 + | cytochrome d terminal oxidase polypeptide subunit II ACIAD2292 2264469 - 2264828 + | hypothetical protein TERM 2673 2264833 - 2264862 + T 91 -12.3 -3.1883 | opp_overlap 2264839, overlap 2264839 TGTATACCTGATTTT TATAAACCCCTAC TCAG GTAGGGGTTTTTA TTGATGCAGCTTTTT TERM 2674 2264856 - 2264839 - T 90 -11.3 -3.87815 | opp_overlap 2264833 2264839 CCTGATTTTTATAAA CCCCTAC TCAG GTAGGGG TTTTTATTGATGCAG TERM 2675 2264839 - 2264856 + T 100 -11.3 -5.1356 | opp_overlap 2264839, overlap 2264833 CCTGATTTTTATAAA CCCCTAC TCAG GTAGGGG TTTTTATTGATGCAG ACIAD2293 2265394 - 2264846 - | putative acetyltransferase TERM 2676 2265455 - 2265441 - R 71 -3.5 -5.05153 | overlap 2265437 ACTCTAAAAAATAAA GCCGA ATCAA TCAGC TTAAACTTTTTCTTT ACIAD2294 2266125 - 2265475 - | putative signal peptide TERM 2677 2266323 - 2266278 - R 100 -11.3 -4.36508 | opp_overlap 2266279 2266283 2266293, overlap 2266279 2266284 2266294 TTATAAAAATAATAA TTCAAACATGAAAAAAGCGCT AAAT AGCGCCCTTTCCATGATTGAT GATTCGATTAGTTAA TERM 2678 2266322 - 2266279 - R 95 -14.8 -3.20278 | opp_overlap 2266279 2266283 2266293, overlap 2266278 2266284 2266294 TATAAAAATAATAAT TCAAACATGAAAAAAGCGCT AAAT AGCGCCCTTTCCATGATTGA TGATTCGATTAGTTA TERM 2679 2266317 - 2266284 - R 100 -13.3 -3.90086 | opp_overlap 2266283 2266279 2266293, overlap 2266279 2266278 2266294 AAATAATAATTCAAA CATGAAAAAAGCGCT AAAT AGCGCCCTTTCCATG ATTGATGATTCGATT TERM 2680 2266307 - 2266294 - R 90 -8.1 -5.32699 | opp_overlap 2266293 2266283 2266279, overlap 2266284 2266279 2266278 TCAAACATGAAAAAA GCGCT AAAT AGCGC CCTTTCCATGATTGA ACIAD2295 2266927 - 2266331 - | putative oxidoreductase related to nitroreductase TERM 2681 2267073 - 2267099 + r 70 -8.1 -3.15013 | opp_overlap 2267078, overlap 2267078 TTAAGGTTTTAAAAC AAAAACTCCAC ACTAA GTGGAGTTTTA TATGTATTCTGAAAT TERM 2682 2267094 - 2267078 - R 93 -8 -5.45802 | opp_overlap 2267073 2267078 GTTTTAAAACAAAAA CTCCAC ACTAA GTGGAG TTTTATATGTATTCT TERM 2683 2267078 - 2267094 + r 86 -8 -4.69028 | opp_overlap 2267078, overlap 2267073 GTTTTAAAACAAAAA CTCCAC ACTAA GTGGAG TTTTATATGTATTCT ftsY 2268242 - 2267121 - | cell division protein TERM 2684 2268366 - 2268350 - H 73 -8.1 -3.58888 | overlap 2268348 AACTAAAACACAACA TGAAAAC CTT GTTTTCA AAATCTGTTTTTTCA TERM 2685 2268457 - 2268474 + G 71 -3.3 -4.98061 | overlap 2268458 TTTTTCTTATTTTTT ACGCGTT CAAT AGCGCGC TTTTATTTACTATGT TERM 2686 2269559 - 2269548 - g 71 -3 -5.07567 | TGATATCTTAAAAAA TCAA CCTC TTGA TCCCAATGAATTAGA ACIAD2298 2268424 - 2269812 + | putative zinc protease ACIAD2299 2269827 - 2271317 + | putative Zinc protease-like signal peptide protein ACIAD2300 2271649 - 2271314 - | hypothetical protein TERM 2687 2271741 - 2271706 - R 84 -8.2 -4.48987 | TTTTCACAAGTAAAA GCGCCCATGACATGAT TTTT AACATGACAAAGGCGC AGTAATCACAATCTA ACIAD2301 2272121 - 2271762 - | hypothetical protein ACIAD2302 2272343 - 2272576 + | hypothetical protein TERM 2688 2272582 - 2272597 + F 84 -6.8 -5.19261 | opp_overlap 2272582 GCAAGCATAATGAAA CGTCAC CTAG GTGGCG TTTTTTAATCCCTTT TERM 2689 2272795 - 2272770 - g 71 -4.7 -4.62069 | opp_overlap 2272776 2272777 TTTCTATTTTAAAAA CCATGATGTAC TGTG GTACGTTATGG GGACTCTATCATCAA ACIAD2303 2272703 - 2273077 + | hypothetical protein ACIAD2305 2273212 - 2273643 + | hypothetical protein ACIAD2306 2274971 - 2273784 - | hypothetical protein ACIAD2307 2275835 - 2274984 - | putative ATPase ACIAD2308 2276243 - 2275857 - | hypothetical protein ACIAD2309 2276556 - 2276236 - | hypothetical protein TERM 2690 2276623 - 2276583 - R 73 -4.2 -4.85129 | overlap 2276576 AGCATACATCAAAAA TTGAACCGATACATTA GGCTTTTTT TAACGCATCAGTCCAA GAAATACTAACGGTC rnd 2277826 - 2276630 - | ribonuclease D, processes tRNA TERM 2691 2277618 - 2277639 + g 70 -8.1 -3.59979 | opp_overlap 2277618 2277622, overlap 2277622 GTTCCATCTAGTAAA TAAACCTGG CCAT TCAGGTTTA TTTGAAATACACCCA TERM 2692 2277639 - 2277618 - G 70 -7.4 -3.76224 | opp_overlap 2277618 2277622, overlap 2277622 GTTCCATCTAGTAAA TAAACCTG GCCATT CAGGTTTA TTTGAAATACACCCA TERM 2693 2277757 - 2277733 - G 87 -8.6 -4.56607 | overlap 2277736 CCATTAACGACAAAA CATCAGCAAG TTGAT CTTGCTGCTG GATAAACTGAAACAT TERM 2694 2278022 - 2277993 - R 100 -10.3 -4.62471 | opp_overlap 2277993, overlap 2278002 TGTAACTTGTAAAAA TGAAATAAACAAT CCAA ATTGTCTATTTCA TTTTCATACGATTAT TERM 2695 2277993 - 2278022 + r 83 -8.1 -4.28762 | opp_overlap 2277993 2278002 TGTAACTTGTAAAAA TGAAATAAACAAT CCAA ATTGTCTATTTCA TTTTCATACGATTAT recR 2278611 - 2278015 - | recombination protein, gap repair TERM 2696 2278565 - 2278528 - G 100 -14.1 -3.31415 | opp_overlap 2278534, overlap 2278523 CATGAGTAAATGTAA CGCCATGCGTTGAGCCG ATTT CGGCCCAACGCTTGGTA AGATACGTAGTGCTT TERM 2697 2278534 - 2278559 + g 100 -14.7 -3.16881 | opp_overlap 2278528 2278523 TAAATGTAACGCCAT GCGTTGAGCCG ATTT CGGCCCAACGC TTGGTAAGATACGTA TERM 2698 2278648 - 2278635 - R 70 -4.5 -4.65933 | TATCCTTAAAATAAA CCTGA CAAG CCAGG TGGCAAACCCATACC ACIAD2313 2278957 - 2278625 - | hypothetical protein metZ 2280179 - 2278989 - | O-succinylhomoserine sulfhydrylase TERM 2699 2280033 - 2280051 + g 86 -8.8 -4.25104 | TTCACCTGAAAATTT TGCCGCTG CCT CAGCCGCA TTTTCATAAACGAAA ACIAD2315 2280314 - 2281417 + | putative poly(R)-hydroxyalkanoic acid synthase (PHA) ACIAD2316 2281421 - 2282293 + | putative 3-hydroxyisobutyrate dehydrogenase ACIAD2317 2282380 - 2282649 + | hypothetical protein ACIAD2318 2282675 - 2283088 + | putative histidine triad family protein TERM 2700 2283088 - 2283072 - f 83 -5.9 -5.0538 | CCTTAGCTGAAAAAA TCAAAGC AGC GCTTTAA ATAAAATGATGTATA TERM 2701 2283109 - 2283122 + F 100 -8.1 -6.12458 | opp_overlap 2283109 ATGATGTATATCAAA GGAGC TAAG GCTCC TTTTTTATTTTTTTA TERM 2702 2283122 - 2283109 - f 75 -8.1 -3.85092 | opp_overlap 2283109 ATGATGTATATCAAA GGAGC TAAG GCTCC TTTTTTATTTTTTTA ACIAD2319 2283333 - 2284439 + | putative porin precursor TERM 2703 2284485 - 2284464 - T 93 -8.1 -5.64274 | opp_overlap 2284464 CCATGCATAAAAAAA TAAAAGGGC ATCT ACCCTTTTA TTTTTTTAAGAATCC TERM 2704 2284464 - 2284485 + T 93 -7.4 -5.42259 | opp_overlap 2284464 CCATGCATAAAAAAA TAAAAGGG CATCTA CCCTTTTA TTTTTTTAAGAATCC ACIAD2320 2285112 - 2284483 - | hypothetical protein ACIAD2322 2285680 - 2285219 - | hypothetical protein ACIAD2323 2285710 - 2286582 + | hypothetical protein TERM 2705 2286592 - 2286615 + T 81 -8.2 -4.2528 | opp_overlap 2286595, overlap 2286595 ACTTAATCAGAATCT AAATGGAGCA TGAT TGCTCCATTC TTTATTGAATTAAGG TERM 2706 2286612 - 2286595 - T 83 -9.9 -3.83154 | opp_overlap 2286592 2286595 TAATCAGAATCTAAA TGGAGCA TGAT TGCTCCA TTCTTTATTGAATTA TERM 2707 2286595 - 2286612 + T 93 -9.9 -4.2416 | opp_overlap 2286595, overlap 2286592 TAATCAGAATCTAAA TGGAGCA TGAT TGCTCCA TTCTTTATTGAATTA lpxB 2287807 - 2286617 - | lipid A-disaccharide synthase TERM 2708 2287528 - 2287516 - G 75 -3.4 -5.08601 | CTATTCCAACAAAAA CATC GACAG GATG TTCACGCCATCTTTG ACIAD2325 2287975 - 2290173 + | putative ferric siderophore receptor protein TERM 2709 2290177 - 2290212 + F 89 -7.7 -5.31456 | opp_overlap 2290178 2290182, overlap 2290182 TTTAAATATTAGTTA ACAAAGCCAATTCTC CATCCC GAGAATTGGCTTTAA TTTTTTATCAGTTGA TERM 2710 2290211 - 2290178 - f 90 -13.4 -3.1489 | opp_overlap 2290177 2290182, overlap 2290182 TTAAATATTAGTTAA CAAAGCCAATTCTC CATCCC GAGAATTGGCTTTA ATTTTTTATCAGTTG TERM 2711 2290182 - 2290207 + F 100 -12 -4.47686 | opp_overlap 2290182 2290178, overlap 2290177 ATATTAGTTAACAAA GCCAATTCTC CATCCC GAGAATTGGC TTTAATTTTTTATCA TERM 2712 2290207 - 2290182 - f 100 -12 -4.22375 | opp_overlap 2290177 2290182, overlap 2290178 ATATTAGTTAACAAA GCCAATTCTC CATCCC GAGAATTGGC TTTAATTTTTTATCA ACIAD2327 2290532 - 2292094 + | hypothetical protein ACIAD2328 2292091 - 2292402 + | hypothetical protein ACIAD2329 2292524 - 2293399 + | hypothetical protein aro 2293501 - 2294613 + | phospho-2-dehydro-3-deoxyheptonate aldolase TERM 2713 2294635 - 2294650 + T 95 -9 -5.26316 | opp_overlap 2294635 CTTTCAATTTAAAAA GCTCTC ATTT GAGAGC TTTTTTATACAATGG TERM 2714 2294650 - 2294635 - T 93 -9 -4.74103 | opp_overlap 2294635 CTTTCAATTTAAAAA GCTCTC ATTT GAGAGC TTTTTTATACAATGG ACIAD2331 2296201 - 2294672 - | hypothetical protein TERM 2715 2295865 - 2295878 + g 79 -8.1 -4.39287 | TGGTCTTGATCTCAG GCTGG CCTT CCAGC TTTTCATGTAATTCA TERM 2716 2296031 - 2296021 - G 71 -4.6 -4.65494 | AAATCACAGATAAAA GCGC TAG ACGC ATGACAAGTGCTAGA ACIAD2333 2296812 - 2297276 + | MarR family multidrug resistance pump transcriptional regulator ACIAD2334 2297941 - 2297273 - | hypothetical protein TERM 2717 2298268 - 2298251 - R 93 -7.7 -5.626 | opp_overlap 2298251 TAGCGCATAAAAAAA CCGCAAT CTAG ACTGCGG TTTTTTTGAAATTAC TERM 2718 2298251 - 2298268 + r 84 -5.5 -5.47399 | opp_overlap 2298251 TAGCGCATAAAAAAA CCGCAAT CTAG ACTGCGG TTTTTTTGAAATTAC glcB 2300449 - 2298287 - | malate synthase G TERM 2719 2300789 - 2300771 - R 100 -13.2 -4.38927 | opp_overlap 2300766 TTTTTATATAATAAA GGCGTTCA GAA TGAACGCC TTACACATCTTTATG ACIAD2336 2301942 - 2300800 - | putative ATPase ACIAD2338 2303042 - 2302032 - | putative transcriptional regulator ACIAD2339 2303197 - 2304708 + | putative flavin-binding monooxygenase TERM 2720 2304750 - 2304725 - f 90 -12.1 -3.34043 | opp_overlap 2304725, overlap 2304728 TCTATCAGGTCATAA TAAGTAAGTTG CTGA CAACTTACTTA TTTTATGCAGTCTCT TERM 2721 2304725 - 2304750 + F 100 -12.1 -4.4195 | opp_overlap 2304725 2304728 TCTATCAGGTCATAA TAAGTAAGTTG CTGA CAACTTACTTA TTTTATGCAGTCTCT TERM 2722 2304747 - 2304728 - f 81 -9.4 -3.81 | opp_overlap 2304725, overlap 2304725 ATCAGGTCATAATAA GTAAGTTG CTGA CAACTTAC TTATTTTATGCAGTC TERM 2723 2305596 - 2305568 - g 72 -7.5 -3.94 | opp_overlap 2305568 2305571 2305571, overlap 2305569 2305571 GCAATGGTGAAACAA TCATGTGGTAC GCATTAT GTACCACATGC TATGGTCAGCGGCGT TERM 2724 2305595 - 2305569 - g 79 -11 -2.95918 | opp_overlap 2305568 2305571 2305571, overlap 2305568 2305571 CAATGGTGAAACAAT CATGTGGTAC GCATTAT GTACCACATG CTATGGTCAGCGGCG ACIAD2340 2304884 - 2305663 + | hypothetical protein pyrF 2306343 - 2305660 - | orotidine-5'-phosphate decarboxylase (OMP decarboxylase) (OMPDCase) (OMPdecase) TERM 2725 2306119 - 2306149 + g 70 -7.6 -3.64599 | opp_overlap 2306133, overlap 2306121 CCATACACCTAAGTC TGCCGCAGCACA TACAGCC TGTGCTGTGGTG TTTGGAATGTCATGA TERM 2726 2306121 - 2306147 + g 78 -10.2 -3.40112 | opp_overlap 2306133, overlap 2306119 ATACACCTAAGTCTG CCGCAGCACA TACAGCC TGTGCTGTGG TGTTTGGAATGTCAT ACIAD2342 2307004 - 2306456 - | putative transcriptional regulator TERM 2727 2307691 - 2307702 + G 70 -5.8 -4.36262 | TTCCGTTTCTACCCA CAGG TCTA CCTG TTTTAGTATCGCTCT ACIAD2343 2307075 - 2307743 + | putative branched-chain amino acid permease (azaleucine resistance) ACIAD2344 2307781 - 2308071 + | hypothetical protein TERM 2728 2308074 - 2308106 + T 80 -4.9 -5.31072 | opp_overlap 2308079 2308081, overlap 2308079 2308081 AGGACTGCCTTAAAA CAAAATAGCCCTTTA CGA TAAAGGGCCATTTGA TTTTTATTATCTTAT TERM 2729 2308101 - 2308079 - T 100 -11.4 -5.07652 | opp_overlap 2308079 2308074 2308081, overlap 2308081 TGCCTTAAAACAAAA TAGCCCTTTA CGA TAAAGGGCCA TTTGATTTTTATTAT TERM 2730 2308079 - 2308101 + T 93 -9.2 -4.44392 | opp_overlap 2308079 2308081, overlap 2308074 2308081 TGCCTTAAAACAAAA TAGCCCTTTA CGA TAAAGGGCCA TTTGATTTTTATTAT TERM 2731 2308099 - 2308081 - T 100 -11.8 -4.16397 | opp_overlap 2308081 2308079 2308074, overlap 2308079 CCTTAAAACAAAATA GCCCTTTA CGA TAAAGGGC CATTTGATTTTTATT TERM 2732 2308081 - 2308099 + T 84 -11.8 -2.5289 | opp_overlap 2308079 2308081, overlap 2308079 2308074 CCTTAAAACAAAATA GCCCTTTA CGA TAAAGGGC CATTTGATTTTTATT ACIAD2345 2308510 - 2308145 - | hypothetical protein himD 2308844 - 2308539 - | integration host factor (IHF),beta subunit, site specific recombination TERM 2733 2308940 - 2308909 - R 100 -16 -4.78848 | opp_overlap 2308909 2308902 TGTTTAAATACAAAA CGGTAGCGCAGTAC ACTA ATACTACGCTACCG TTTACAGTATTTGTA TERM 2734 2308909 - 2308940 + r 95 -13.1 -3.70571 | opp_overlap 2308909, overlap 2308902 TGTTTAAATACAAAA CGGTAGCGCAGTA CACTAA TACTACGCTACCG TTTACAGTATTTGTA rpsA 2310675 - 2309002 - | 30S ribosomal protein S1 TERM 2735 2309351 - 2309370 + g 72 -7.2 -4.00042 | opp_overlap 2309349 2309351 GCAGCCAAGAAATCA TTGAACGG ATCG CTGTTCAA TTGTTTGATACCAAG TERM 2736 2309697 - 2309731 + g 90 -5.9 -5.42975 | gap 1, overlap 2309699 CCATAACATCAACTT CAT-CACCAATCTGAA CAAC TTTAGATGGGTGGATG TTTTTGTTTGTGTGA TERM 2737 2310483 - 2310507 + g 78 -10.1 -3.52918 | opp_overlap 2310486, overlap 2310486 CGTCAACAGTATCAC CAACTTGAACT TCA AGTTCACGTTG TTCATTTAAAAATTC cmk 2311471 - 2310788 - | cytidylate kinase (cytidine monophosphate (CMP) kinase) TERM 2738 2310912 - 2310893 - G 73 -10 -3.05715 | opp_overlap 2310888 AACTGCTGGACGTAA CGGAGCGA CAGT TCGCTCCA TATCACGTTTATCAC TERM 2739 2311231 - 2311244 + g 89 -3.9 -5.64421 | opp_overlap 2311231, overlap 2311223 CACCGTCCAACAAAA TGATA GTGC TATCA TTTTTTGTTTCAAAT ACIAD2349 2311916 - 2311482 - | hypothetical protein ACIAD2350 2312542 - 2312018 - | putative deaminase ACIAD2351 2313669 - 2312548 - | putative enoyl-CoA hydratase/isomerase ung 2314379 - 2313666 - | uracil-DNA glycosylase TERM 2740 2313769 - 2313754 - G 91 -4.6 -5.68023 | overlap 2313756 TTACAACCAAAAAAA CCGCCA CGAT TTGCGG CTAATGGGGATGGAT TERM 2741 2314132 - 2314114 - G 78 -5.2 -4.96848 | opp_overlap 2314115, overlap 2314115 TTTTGCACAGAAAAA CTCAAGCC ATT GGCCTGAT TTGGGCCATGATAGG TERM 2742 2314131 - 2314115 - G 75 -8.7 -3.57627 | opp_overlap 2314115, overlap 2314114 TTTGCACAGAAAAAC TCAAGCC ATT GGCCTGA TTTGGGCCATGATAG ACIAD2353 2315029 - 2314433 - | putative 6-pyruvoyl-tetrahydropterin synthase TERM 2743 2315180 - 2315168 - R 76 -7.7 -4.0044 | overlap 2315158 AATCATCATTACAAA TGACC CGA GGTCA CTCAAATTTAATTTT xcpX 2316156 - 2315188 - | general secretion pathway protein K TERM 2744 2316022 - 2315993 - G 91 -3.5 -5.77853 | AATTCTGAAAAAAAA GCCTCTGCACTTT TAGC ATAGAGCAAAGAC TGATTTTGACGCATT xcpW 2316797 - 2316171 - | general secretion pathway protein J precursor (PilD-dependent protein pddD) xcpV 2317180 - 2316794 - | general secretion pathway protein I precursor (PilD-dependent protein pddC) ACIAD2357 2317718 - 2317170 - | putative general secretion pathway protein G precursor TERM 2745 2317531 - 2317549 + g 76 -2.5 -5.28176 | AATACTCTTCCTTGA TCAATAG ACTCC TTATTGA TTTTTTGTAGATCAA ACIAD2358 2318345 - 2317731 - | putative transcriptional regulator ACIAD2359 2319152 - 2318379 - | putative deoxyribonuclease TERM 2746 2318801 - 2318816 + g 81 -5.4 -5.16841 | gap 1 TTGACGCTGCAATAT GCCGTGC AAA GCA-GGC TTTTTGTTCATCTAC pilZ 2319514 - 2319170 - | type 4 fimbrial biogenesis protein holB 2320512 - 2319517 - | DNA polymerase III, delta prime subunit kdsB 2321280 - 2320519 - | 3-deoxy-manno-octulosonate cytidylyltransferase TERM 2747 2321212 - 2321196 - G 74 -6.6 -4.30441 | opp_overlap 2321195 2321196 CGACAACACGTAAAA TCATGG CGCGC CCATGA ATTTCAAGTAAAGGT lpxK 2322300 - 2321290 - | tetraacyldisaccharide 4'-kinase (Lipid A 4'-kinase) msbA 2324031 - 2322307 - | lipid ABC transporter membrane/ATP-binding protein TERM 2748 2324273 - 2324307 + r 90 -11.6 -3.62096 | opp_overlap 2324273 AACTTCACATAAAAA TAGGGTATCAACTGAA TGA TTCAATTGACACCCTA TTTAAAATAGTACAA TERM 2749 2324307 - 2324273 - R 100 -16 -4.98522 | opp_overlap 2324273 AACTTCACATAAAAA TAGGGTATCAACTGAA TGA TTCAATTGACACCCTA TTTAAAATAGTACAA spoOJ 2325246 - 2324356 - | chromosome partitioning protein TERM 2750 2325021 - 2325034 + g 74 -6.7 -4.27584 | GAATCACAATAGGCT GCATG ACAC CATGC TTTTCAATTGAAGCT soj 2326025 - 2325243 - | chromosome partitioning protein gidB 2326677 - 2326039 - | glucose-inhibited division protein B (methyltransferase) ACIAD2369 2327451 - 2326762 - | putative nucleotidyl transferase ACIAD2370 2328470 - 2327448 - | putative phosphotransferase related to Ser/Thr protein kinase TERM 2751 2327834 - 2327811 - G 71 -8.2 -3.54676 | AGTGATTGAAATCAA GTCATAGGTG TCGG CACCTATCAC AGCATCCTGAAAATC ostA 2328576 - 2331035 + | organic solvent tolerance protein precursor surA 2331020 - 2332375 + | peptidyl-prolyl cis-trans isomerase TERM 2752 2332470 - 2332414 - T 79 -10.3 -2.84454 | opp_overlap 2332419, overlap 2332413 ATAAACCAGCCAAAT CTGAACTGCACCCTTCAAATTAGAC TAAAAGT GTCCAACTTTCGGGGTGCAGTTCAA TCCAGGCTGGTTTTT TERM 2753 2332512 - 2332530 + T 75 -8.9 -3.52113 | opp_overlap 2332512, overlap 2332510 TTTACCATAAAAAAA CCCCAAT ATGAA ATTGGGG TCTTTATCAAACGGT TERM 2754 2332530 - 2332512 - T 95 -8.9 -5.67063 | opp_overlap 2332510 2332512 TTTACCATAAAAAAA CCCCAAT ATGAA ATTGGGG TCTTTATCAAACGGT hfq 2333077 - 2332553 - | host factor I for bacteriophage Q beta replication, a growth-related protein miaA 2334112 - 2333168 - | delta(2)-isopentenylpyrophosphate tRNA-adenosine transferase mutL 2336080 - 2334119 - | enzyme in methyl-directed mismatch repair, stimulates binding of Vsr and MutS to heteroduplex DNA ACIAD2376 2336558 - 2336082 - | hypothetical protein ACIAD2377 2336684 - 2337598 + | putative pseudouridylate synthase ACIAD2378 2337708 - 2338037 + | hypothetical protein ACIAD2379 2338119 - 2338574 + | putative acetyltransferase rsuA 2339286 - 2338567 - | 16S rRNA pseudouridylate 516 synthase ACIAD2383 2339965 - 2340420 + | hypothetical protein TERM 2755 2340553 - 2340587 + T 100 -11.1 -4.68994 | gap 1, opp_overlap 2340563 AGCTTATATATTTTC GAGCAGGATATTTAAT TTTG ATTAAATATCCT-CTC TTTTTAACTCATGGT metR 2341560 - 2340640 - | transcriptional regulator TERM 2756 2340789 - 2340804 + g 74 -4.6 -4.8083 | opp_overlap 2340775 2340783 2340785 CGCAGTCAAGACGAC GGCTCG TCAC CCAGCC TTTTTGCTCATATTC TERM 2757 2341764 - 2341745 - H 72 -2.8 -5.26119 | overlap 2341761 CCCTTAAAAATAAAA GATAGAGC CTAA GCCATATC ATGAATAAAATTCAT TERM 2758 2342160 - 2342176 + G 73 -2.9 -5.1244 | overlap 2342161 TTTCTTATTATTTTA GCACTTG CTA CAGGTGG TTTTTGTATTGGTAC TERM 2759 2342533 - 2342514 - g 74 -4.2 -5.00616 | overlap 2342515 GCTGGCCCTAAAAAA CGTGCATC AGCA GTTGCACA AGTGATGATGGGATT TERM 2760 2343149 - 2343161 + G 70 -7.7 -3.68569 | opp_overlap 2343140 ATTTAACATTGCCAA TGCAC TCG GTGCA TTCTTGGGTGGCTGG ACIAD2385 2342094 - 2343305 + | major facilitator superfamily permease TERM 2761 2343319 - 2343360 + T 77 -8.9 -3.60805 | opp_overlap 2343328 2343341 2343344, overlap 2343321 2343324 AATCTTGTTAAACTT TTGAATGAATCACCATGAT CAAT ATCATGATGATTCATGCTA TTTAAGATACAATCT TERM 2762 2343321 - 2343358 + T 89 -11.5 -3.38224 | opp_overlap 2343328 2343341 2343344, overlap 2343319 2343324 TCTTGTTAAACTTTT GAATGAATCACCATGAT CAAT ATCATGATGATTCATGC TATTTAAGATACAAT TERM 2763 2343324 - 2343355 + T 84 -11.8 -2.85297 | opp_overlap 2343328 2343341 2343344, overlap 2343321 2343319 TGTTAAACTTTTGAA TGAATCACCATGAT CAAT ATCATGATGATTCA TGCTATTTAAGATAC TERM 2764 2343351 - 2343328 - T 75 -9 -3.35088 | opp_overlap 2343324 2343321 2343319, overlap 2343341 2343344 AAACTTTTGAATGAA TCACCATGAT CAAT ATCATGATGA TTCATGCTATTTAAG iunH 2344321 - 2343374 - | inosine-uridine preferring nucleoside hydrolase TERM 2765 2343742 - 2343724 - G 76 -10.4 -3.05844 | CTTTCGAGGTTAAGA CTTGATGT GTG ACATCAAG TGGAATCACAGTTAA ACIAD2388 2345250 - 2344399 - | putative oxidoreductase TERM 2766 2345319 - 2345289 - R 74 -3.5 -5.28481 | gap 1, opp_overlap 2345290 2345292, overlap 2345292 GATCTAAGCAAAAAA TAAGCCGTATTT ATGTCGTA AAATACGGC-TA TTGGTGTATGTATTT TERM 2767 2345317 - 2345292 - R 83 -7.7 -4.72473 | opp_overlap 2345290 2345292, overlap 2345289 CTAAGCAAAAAATAA GCCGTATTT ATGTCGTA AAATACGGC TATTGGTGTATGTAT ACIAD2389 2346625 - 2345375 - | NUP family transport protein TERM 2768 2346413 - 2346401 - G 79 -3.4 -5.33405 | CGCACCAAACAAAAA TGCA CTGCC TGCA TCCGCATAACCAATC ACIAD2390 2348062 - 2347217 - | putative potassium channel protein TERM 2769 2348314 - 2348296 - R 100 -13.2 -5.80364 | opp_overlap 2348299 ACTTTAATAAAAAAA CAAGCACG TTT CGTGCTTG TGGAGAAGATTCGAT TERM 2770 2348299 - 2348311 + r 77 -9.1 -3.29461 | opp_overlap 2348296 TTAATAAAAAAACAA GCACG TTT CGTGC TTGTGGAGAAGATTC ACIAD2391 2348701 - 2348336 - | hypothetical protein TERM 2771 2348587 - 2348599 + g 71 -3.4 -5.07053 | opp_overlap 2348598 TGAAGGTTTCTTGCA CATC AGAAG GATG TTTTTTGACATGGTT rbsK 2348944 - 2349882 + | ribokinase TERM 2772 2349962 - 2349981 + T 100 -12.1 -5.17507 | opp_overlap 2349959 2349956 ATTTATATACGACTA GCCCCGC TAATAT GCGGGGC TTTTTATTGCCTTTT ACIAD2393 2350354 - 2350022 - | hypothetical protein TERM 2773 2350456 - 2350440 - H 76 -3.7 -5.27476 | opp_overlap 2350417, overlap 2350435 TTTAACAAAACAAAA GTTTTGT AAT ACAATAC TGCTAGTTTTTAAAA ACIAD2394 2350479 - 2350895 + | hypothetical protein TERM 2774 2350900 - 2350917 + T 82 -5.5 -5.243 | opp_overlap 2350900, overlap 2350890 ATGAAAATTAAAAAA GGACTGA TTTC TCAGCCC TTTTTTACTCATTTA TERM 2775 2350917 - 2350900 - T 93 -7.7 -5.48054 | opp_overlap 2350900 2350890 ATGAAAATTAAAAAA GGACTGA TTTC TCAGCCC TTTTTTACTCATTTA acnB 2353590 - 2350951 - | bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase TERM 2776 2351435 - 2351420 - G 70 -7.6 -3.64703 | CCCGCTGCACGGAAA TGACCA ATGT TGGTCA TACAAGAACCGATGA TERM 2777 2353737 - 2353753 + r 80 -5.1 -5.24989 | TCTCGTTATTTTATA GCGAAAT AGT AGTTCGC TTTTTTGCTATATCA ACIAD2396 2354499 - 2353951 - | hypothetical protein ACIAD2397 2355031 - 2354618 - | hypothetical protein ACIAD2398 2355436 - 2355083 - | hypothetical protein ACIAD2399 2355406 - 2355576 + | hypothetical protein copA 2355733 - 2358141 + | copper transporting ATPase ACIAD2401 2358141 - 2358353 + | putative heavy metal transport/detoxification protein TERM 2778 2358408 - 2358387 - T 100 -11.7 -4.20354 | opp_overlap 2358387 AACTCAATGCTAAAA GGTCGATAT TTAA ATATCGACC TTTTTATTTATATTC TERM 2779 2358387 - 2358408 + T 100 -11.7 -5.4659 | opp_overlap 2358387 AACTCAATGCTAAAA GGTCGATAT TTAA ATATCGACC TTTTTATTTATATTC ACIAD2402 2362932 - 2358433 - | hypothetical protein TERM 2780 2360184 - 2360202 + g 73 -8.8 -3.53012 | opp_overlap 2360184 2360181 2360186, overlap 2360164 2360163 TTTGATTATAAATCA CAGCCGCA TTT TGCTGCTG TTTCAACACAGCACG TERM 2781 2361129 - 2361161 + g 86 -11.5 -3.37522 | opp_overlap 2361138, overlap 2361132 2361138 CACCCGATTTTTCAT CATGAAAAAGTATAG CTG CTGTACTTTTTCCTG TTAATTCAATCAAAT TERM 2782 2361132 - 2361158 + g 81 -11.8 -2.5507 | opp_overlap 2361138, overlap 2361129 2361138 CCGATTTTTCATCAT GAAAAAGTATAG CTG CTGTACTTTTTC CTGTTAATTCAATCA TERM 2783 2361138 - 2361152 + g 74 -5 -4.90136 | opp_overlap 2361138, overlap 2361132 2361129 TTTCATCATGAAAAA GTATAG CTG CTGTAC TTTTTCCTGTTAATT TERM 2784 2361503 - 2361520 + g 77 -8.5 -3.92869 | GCAGGTAAACTGCCT TGTTCGT GCGC ACGAACA TTTGTCGCTACATGA ACIAD2403 2365650 - 2362957 - | putative outer membrane protein TERM 2785 2364084 - 2364096 + g 70 -7.7 -3.73068 | opp_overlap 2364080 AACGTAATGTAGGAT TCTGC TGG GCAGA TTCTTGGGTTCCAGC TERM 2786 2366175 - 2366189 + G 74 -4.2 -5.01732 | GCACTGTTTCTTATG GGTGTA CAT TCCACC TTTTTTGGACCCATT TERM 2787 2366753 - 2366765 + G 72 -7.7 -3.85698 | CGCGCTTTATCTCGC TGCCA GTC TGGCA TTTGTGCCAGAGCGA ACIAD2404 2365866 - 2367140 + | hypothetical protein TERM 2788 2367281 - 2367259 - g 77 -8.4 -3.96841 | GCCGAACAAACACAA GCACCTCTCA CGG TGAGTGATGC AAGACATGTTGCAGG ACIAD2405 2367145 - 2367780 + | putative ubiquinone biosynthesis protein TERM 2789 2367798 - 2367828 + T 75 -7.1 -4.10161 | gap 1, opp_overlap 2367798 2367807, overlap 2367802 2367807 CATCAATTCATTCAA TAATAAAAACCCGC AAAA GTGGGTTT-TATTA TTTTAAGCCATGCTC TERM 2790 2367807 - 2367820 + T 83 -5.9 -5.093 | opp_overlap 2367807 2367798, overlap 2367802 2367798 ATTCAATAATAAAAA CCCGC AAAA GTGGG TTTTATTATTTTAAG TERM 2791 2367820 - 2367807 - T 76 -3.7 -5.30348 | opp_overlap 2367802 2367798 2367807, overlap 2367798 ATTCAATAATAAAAA CCCGC AAAA GTGGG TTTTATTATTTTAAG ACIAD2406 2368320 - 2367826 - | hypothetical protein TERM 2792 2368152 - 2368134 - G 100 -9 -5.25803 | AAGCTTCATAAAAAA TATTGTCA GGT TGACAATA ATAACGTTGCCCTTT ACIAD2407 2369011 - 2368619 - | putative 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase folB 2369417 - 2369037 - | dihydroneopterin aldolase ACIAD2409 2370743 - 2369436 - | putative kinase ACIAD2411 2371567 - 2370755 - | molybdopterin biosynthesis protein (moeB) or thiamin-thiazole moiety synthesis (thiF) TERM 2793 2371099 - 2371112 + g 73 -3.9 -5.06414 | opp_overlap 2371099 TTGCAGATGCACTAA TCAAA GGTA TTTGA TTTTTCTTACAAGAA TERM 2794 2371750 - 2371729 - H 72 -6 -4.36595 | opp_overlap 2371729 2371734 TAGTTAAAGTCAAAA TAAAATGG GTATTT CCATTTTA TTTGCTTTAATGGAT TERM 2795 2371729 - 2371750 + H 71 -6.7 -4.10953 | opp_overlap 2371729, overlap 2371734 TAGTTAAAGTCAAAA TAAAATGGG TATT TCCATTTTA TTTGCTTTAATGGAT TERM 2796 2373156 - 2373169 + H 77 -5.3 -4.84359 | TCAAACATTACTTTA CTGAT TCAT ATCAG TTTTTCTAACGATAG ACIAD2412 2373209 - 2375191 + | putative chaperone TERM 2797 2375237 - 2375206 - T 100 -10.2 -4.20783 | ATCGTACTGAATAAA TCGAGTGTCTGGAA ATTT TTACAGGCACTCGA TCAAATAAGATGTAA hscC 2377001 - 2375301 - | chaperone protein TERM 2798 2377679 - 2377695 + G 74 -4.4 -4.93547 | TTCTTTATGTACTTA TCTTGC TATGT GCAGGA TTTTTAATTGCTTAC ACIAD2415 2377135 - 2379747 + | hypothetical protein ACIAD2416 2380771 - 2380001 - | oxidoreductase TERM 2799 2380087 - 2380102 + g 72 -6.1 -4.26076 | opp_overlap 2380074 TATGTGCGACCAATG CCGCA AACTCC TGCGG TTTTCCTAAACGTGA TERM 2800 2380284 - 2380267 - G 70 -7.7 -3.6579 | AAGTCATTGCAACAA CTGCACC TTTT GATGCAG CATAAGCCGCTTGAC hemK 2382061 - 2381237 - | methyl transferase TERM 2801 2381925 - 2381949 + g 86 -8 -4.65895 | gap 1 TGTTGTTCCTGCTCC TGCGTCAGTAT CTGC AT-CTGACGCA TTTTTAGCTCAAGAC prfA 2383149 - 2382061 - | peptide chain release factor 1 TERM 2802 2382337 - 2382352 + g 74 -4.6 -4.91109 | opp_overlap 2382335, overlap 2382335 CGACACCAGTAAAGC CATGGC CTTG GCCTTG TTTTTATGCTGAGAA TERM 2803 2383510 - 2383529 + H 77 -5 -5.16572 | opp_overlap 2383510, overlap 2383504 ACCAAAACGCAATAA TGTGATGA TTGT TCTTCACA TTTTTTAGCTTAAGT ACIAD2419 2383607 - 2384068 + | putative signal peptide TERM 2804 2384104 - 2384087 - f 79 -5.6 -5.04222 | opp_overlap 2384087, overlap 2384081 TAATCAAATCAAAAA CAGCAT AATCAA ATGCTG TTTTTTTATTTTTGA TERM 2805 2384087 - 2384104 + F 95 -5.6 -6.20267 | opp_overlap 2384087 2384081 TAATCAAATCAAAAA CAGCAT AATCAA ATGCTG TTTTTTTATTTTTGA ACIAD2420 2384206 - 2385228 + | putative monooxygenase TERM 2806 2385257 - 2385293 + T 76 -7.6 -3.91087 | gap 1, opp_overlap 2385253 2385257 TAAACAAGAAGGATA GCGTTTTTATAGAGTCT GTTC AGATT-TATAAAAGCGC TTTCATATAATTTGA ACIAD2421 2386755 - 2385310 - | putative diguanylate cyclase/phosphodiesterase ACIAD2422 2387796 - 2386960 - | hypothetical protein TERM 2807 2387178 - 2387188 + g 78 -4 -5.23765 | opp_overlap 2387178 CATCAATCATTAAAC CAAA CAA TTTG TTTTTATGTTCTTTA TERM 2808 2388285 - 2388318 + G 86 -11.7 -3.26471 | overlap 2388289 CTTTTAACGCACTTT CTAACGGCAACCCTG AAAT CGCGGTTGCCGTTCG TTCATCTGCGACTGC TERM 2809 2388289 - 2388314 + G 83 -11.1 -3.43071 | overlap 2388285 TAACGCACTTTCTAA CGGCAACCCTG AAAT CGCGGTTGCCG TTCGTTCATCTGCGA ppsA 2387954 - 2390332 + | phosphoenolpyruvate synthase TERM 2810 2390372 - 2390342 - f 87 -11.3 -3.31144 | opp_overlap 2390348, overlap 2390348 GCCTGACTTTTATAA GAAAAAGACCCAC CACAC GTGGGTCTTTTTT CATCATTAGATGTTG TERM 2811 2390348 - 2390366 + F 100 -10.3 -5.2189 | opp_overlap 2390342 2390348 CTTTTATAAGAAAAA GACCCAC CACAC GTGGGTC TTTTTTCATCATTAG TERM 2812 2390366 - 2390348 - f 100 -10.3 -5.18726 | opp_overlap 2390348, overlap 2390342 CTTTTATAAGAAAAA GACCCAC CACAC GTGGGTC TTTTTTCATCATTAG ACIAD2424 2390401 - 2391162 + | hypothetical protein TERM 2813 2391186 - 2391167 - f 74 -6.4 -4.32678 | opp_overlap 2391168, overlap 2391164 2391168 TTTCCAAATAAATAA GGGAGTGA TTAC TCACTCCT TTTTTAACTATAAAT TERM 2814 2391168 - 2391185 + F 100 -9.9 -5.1287 | opp_overlap 2391168 2391167 2391164 TTCCAAATAAATAAG GGAGTGA TTAC TCACTCC TTTTTTAACTATAAA TERM 2815 2391185 - 2391168 - f 79 -9.9 -3.18884 | opp_overlap 2391168, overlap 2391167 2391164 TTCCAAATAAATAAG GGAGTGA TTAC TCACTCC TTTTTTAACTATAAA TERM 2816 2391238 - 2391226 - f 71 -3.5 -5.15526 | ATATAAAATTAAAAA TAAAT CCT ATTTA ATTCCAAGTAAAAAA TERM 2817 2392304 - 2392279 - g 71 -9.1 -3.31817 | gap 1, overlap 2392300 2392301 AAGCATCAAATTGAA GC-GCTTGTACA TCG TGCACAAGCTGC AGGTGATGCAGAAGC cyoA 2391463 - 2392524 + | cytochrome o ubiquinol oxidase subunit II TERM 2818 2393520 - 2393532 + G 74 -7.7 -3.94188 | ATTGGCATTCGTTGT GTGGT TAC ACCAC TTCTTTACCATGGGT cyoB 2392528 - 2394516 + | cytochrome o ubiquinol oxidase subunit I cyoC 2394521 - 2395141 + | cytochrome o ubiquinol oxidase subunit III cyoD 2395141 - 2395467 + | cytochrome o ubiquinol oxidase subunit IV cyoE 2395469 - 2396356 + | protoheme IX farnesyltransferase (heme O biosynthesis) TERM 2819 2396344 - 2396366 + F 86 -10.7 -3.23456 | opp_overlap 2396342 2396341, overlap 2396343 CCCTGCTCCAAATCT TCCTCTCTT TTAAT AAGAGAGGA TATCTATTTGATTCA rpsF 2396534 - 2396920 + | 30S ribosomal protein S6 rpsR 2396932 - 2397159 + | 30S ribosomal protein S18 rplI 2397168 - 2397614 + | 50S ribosomal protein L9 TERM 2820 2397632 - 2397651 + F 100 -12.2 -5.9362 | opp_overlap 2397632 TCTCTGCATAAAAAA GAGCATGC TTTC GCATGCTC TTTTTTTATCTTTTA TERM 2821 2397651 - 2397632 - f 100 -12.2 -5.24129 | opp_overlap 2397632 TCTCTGCATAAAAAA GAGCATGC TTTC GCATGCTC TTTTTTTATCTTTTA dnaB 2397789 - 2399234 + | replicative DNA helicase;chromosome replication, chain elongation alr 2399265 - 2400341 + | alanine racemase 1, biosynthetic TERM 2822 2400380 - 2400355 - T 100 -10.5 -4.92783 | opp_overlap 2400355 2400348 AATTCATCATAAAAA GCCGTATCAAA AAGA TTTGCTACGGC TTTAAACTTATATTG TERM 2823 2400355 - 2400380 + T 87 -10.5 -3.71883 | opp_overlap 2400355, overlap 2400348 AATTCATCATAAAAA GCCGTATCAAA AAGA TTTGCTACGGC TTTAAACTTATATTG ACIAD2435 2401158 - 2400424 - | putative proteasome protease ACIAD2436 2401953 - 2401174 - | putative transglutaminase TERM 2824 2401575 - 2401595 + g 73 -5.5 -4.70879 | opp_overlap 2401580, overlap 2401576 TTTGACTTAAATTTA TTAAGGATG ATA CATCTTTAG TTTTTACAATTTCCA ACIAD2437 2402498 - 2401950 - | hypothetical protein ACIAD2438 2404131 - 2402581 - | hypothetical protein mdcH 2404338 - 2405345 + | transcriptional factor TERM 2825 2405367 - 2405350 - T 100 -11.3 -5.27477 | ATCTTAAGTAAAAAA GAGAGCC ATAT GGCTCTC TCAACATTTATATGT TERM 2826 2405673 - 2405690 + T 93 -11.3 -4.0371 | opp_overlap 2405673 CATTGCATTAAAAAA GCCCAGT AAAT ACTGGGC TTTCTATACAGAATC TERM 2827 2405690 - 2405673 - T 100 -11.3 -5.15634 | opp_overlap 2405673 CATTGCATTAAAAAA GCCCAGT AAAT ACTGGGC TTTCTATACAGAATC gidA 2407588 - 2405708 - | tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA ACIAD2441 2407767 - 2408057 + | hypothetical protein TERM 2828 2408096 - 2408116 + F 95 -9 -5.11836 | opp_overlap 2408096 TATAGCGTTATTAAA CGGTTCAG TTATT CTGAGCCG TTTTCTTTTAGGTAT prmA 2408200 - 2409111 + | methylation of 50S ribosomal subunit protein L11 (ribosomal protein L11 methyltransferase) TERM 2829 2409200 - 2409189 - g 75 -5.8 -4.58685 | opp_overlap 2409199 AAAGTTTCGCAAAAA CAGC TCAC GCTG TCTCAAGGCATGGTA TERM 2830 2409384 - 2409373 - g 75 -3 -5.08824 | TTTTTAGTCAAAAAA TTGA AAAC TCAA ATCTAGATCTGCTAA ACIAD2444 2409129 - 2409677 + | hypothetical protein ACIAD2445 2409722 - 2409904 + | hypothetical protein TERM 2831 2410109 - 2410147 + F 86 -2.5 -5.93252 | gap 1, opp_overlap 2410134 TAAATAATTATTCTC GTCATG-TGTGCTTTATC CTGA GATAGCGCATAGCGTGGC TTTTTTGTTTTTAAA TERM 2832 2410252 - 2410285 + F 83 -8.3 -4.41616 | gap 1, overlap 2410253 2410257 TTGTTTCCAAGTTTT AGAGCCACTGTTTTAG GAT CTAAAACAG-GGTTCA TTTATTTAGACCACT TERM 2833 2410253 - 2410284 + F 89 -11.8 -3.24488 | gap 1, overlap 2410252 2410257 TGTTTCCAAGTTTTA GAGCCACTGTTTTAG GAT CTAAAACAG-GGTTC ATTTATTTAGACCAC TERM 2834 2410257 - 2410281 + F 83 -10.1 -3.75884 | overlap 2410253 2410252 TCCAAGTTTTAGAGC CACTGTTTTAG GAT CTAAAACAGGG TTCATTTATTTAGAC fis 2410329 - 2410619 + | DNA-binding protein for site-specific recombination, transcription of rRNA and tRNA operons and DNA replication TERM 2835 2410629 - 2410648 + F 100 -10 -5.30686 | opp_overlap 2410624 2410629, overlap 2410643 2410645 GAATAAATGATAAAA TGCTCACG TCCT CGTGGGCA TTTTTTATGCCTATT TERM 2836 2410648 - 2410629 - f 83 -7.8 -4.67256 | opp_overlap 2410629 2410643 2410645, overlap 2410624 GAATAAATGATAAAA TGCTCACG TCCT CGTGGGCA TTTTTTATGCCTATT TERM 2837 2410643 - 2410661 + F 74 -5.3 -4.76191 | opp_overlap 2410629 2410624, overlap 2410629 2410645 ATGCTCACGTCCTCG TGGGCAT TTTTT ATGCCTA TTTGTTTTAATCTGT purH 2410701 - 2412275 + | bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase TERM 2838 2412326 - 2412348 + F 83 -10.6 -3.28791 | overlap 2412328 TTAGTTTTGTTTTAT TACCCTCTCT TAT AGAGAGGGTC TTGTACAAAAGAAAT TERM 2839 2412328 - 2412346 + F 91 -13.2 -3.21276 | overlap 2412326 AGTTTTGTTTTATTA CCCTCTCT TAT AGAGAGGG TCTTGTACAAAAGAA TERM 2840 2413257 - 2413246 - g 70 -7.2 -3.77196 | opp_overlap 2413245 TTATGATTGATGAAA GCGG TCAA CCGC GTGTGATTGAGTTTA purD 2412387 - 2413694 + | phosphoribosylamine--glycine ligase TERM 2841 2413709 - 2413740 + F 100 -20.4 -3.81461 | opp_overlap 2413713 2413717, overlap 2413717 ACCACATTCTGATTA TGAAGAAACGCGCA TCTT TGCGCGTTTCTTCA TTTAAATTACTATTT TERM 2842 2413736 - 2413713 - f 100 -15.4 -3.21416 | opp_overlap 2413709 2413717, overlap 2413717 CATTCTGATTATGAA GAAACGCGCA TCTT TGCGCGTTTC TTCATTTAAATTACT TERM 2843 2413717 - 2413732 + F 100 -10.4 -4.40298 | opp_overlap 2413717 2413713, overlap 2413709 CTGATTATGAAGAAA CGCGCA TCTT TGCGCG TTTCTTCATTTAAAT TERM 2844 2413732 - 2413717 - f 100 -10.4 -4.2704 | opp_overlap 2413709 2413717, overlap 2413713 CTGATTATGAAGAAA CGCGCA TCTT TGCGCG TTTCTTCATTTAAAT TERM 2845 2414321 - 2414302 - g 73 -5.7 -4.42594 | opp_overlap 2414302, overlap 2414296 GAAAGTAAAGATAAA GTGGCTG CTGTTT CAACCAC TTATATCGAACCAAT TERM 2846 2414396 - 2414386 - g 70 -5.4 -4.43877 | CAATTTCCAAATAAA GCAA CTA TTGC AATTCCAAACGATGC ACIAD2449 2413978 - 2414847 + | putative lipoprotein, attached to the cytoplasmic membrane TERM 2847 2414890 - 2414870 - f 100 -11.2 -4.14397 | opp_overlap 2414870 ATGCTATAAATGAAA CAGGCAAG GTCAA CTTGCCTG TTTTTTCTTTTATGT TERM 2848 2414870 - 2414890 + F 100 -11.2 -5.8901 | opp_overlap 2414870 ATGCTATAAATGAAA CAGGCAAG GTCAA CTTGCCTG TTTTTTCTTTTATGT ACIAD2450 2414921 - 2415946 + | D-and L-methionine ABC transporter ATP-binding protein TERM 2849 2416372 - 2416382 + G 71 -6.8 -4.18697 | TCTGCACAAGCTATG GGTG CCT CACC TTTTCAGATCATTTT ACIAD2451 2415943 - 2416638 + | ABC transporter permease TERM 2850 2416665 - 2416648 - f 90 -11.3 -3.69354 | opp_overlap 2416648 CGCTAGAATTTTAAA GCCCTCA ATAT TGAGGGC TTTCTTTTGTAGAAA TERM 2851 2416648 - 2416665 + F 100 -11.3 -4.77173 | opp_overlap 2416648 CGCTAGAATTTTAAA GCCCTCA ATAT TGAGGGC TTTCTTTTGTAGAAA ACIAD2452 2416769 - 2417503 + | putative hydroxyacylglutathione hydrolase (GloB) TERM 2852 2417500 - 2417510 + F 76 -4 -5.36314 | ATTAAAAGACCAGTT CTAA TTT TTAG TTTTTTAATATTTTG ACIAD2453 2417824 - 2418027 + | hypothetical protein TERM 2853 2418101 - 2418130 + T 89 -7.9 -5.32944 | gap 1 CAAGGATAAAATGTG GCTCTGATTAC-CG TAA CGCGTTGTCAGAGC TTTTTTAATTGTGAA TERM 2854 2418430 - 2418404 - T 90 -11 -3.889 | opp_overlap 2418406, overlap 2418406 TTTAATCATATTAAA GATGCCTATTAC GTT GTAATAGGCATT GTTCGTTCAATTTAT TERM 2855 2418428 - 2418406 - T 100 -13.6 -3.52849 | opp_overlap 2418406, overlap 2418404 TAATCATATTAAAGA TGCCTATTAC GTT GTAATAGGCA TTGTTCGTTCAATTT TERM 2856 2418406 - 2418428 + T 100 -13.6 -3.84278 | opp_overlap 2418406 2418404 TAATCATATTAAAGA TGCCTATTAC GTT GTAATAGGCA TTGTTCGTTCAATTT ubiA 2419327 - 2418446 - | 4-hydroxybenzoate octaprenyltransferase TERM 2857 2418897 - 2418887 - G 73 -5.4 -4.66163 | AGCCGCACCCAAAAA TACC TGA GGTA AGTGGGTATAACGTT ubiC 2419839 - 2419336 - | chorismate pyruvate lyase ACIAD2457 2420011 - 2420223 + | hypothetical protein TERM 2858 2420270 - 2420301 + T 71 -7.4 -3.54459 | opp_overlap 2420278, overlap 2420277 2420278 AATTTGTTTTAGCCA TAAAAAAACCACGA TAAA TCGTGGGTTTTGTA TTTACAGCAAATTAC TERM 2859 2420277 - 2420294 + T 74 -5.5 -4.78848 | opp_overlap 2420278, overlap 2420270 2420278 TTTAGCCATAAAAAA ACCACGA TAAA TCGTGGG TTTTGTATTTACAGC TERM 2860 2420278 - 2420293 + T 75 -9 -3.46586 | opp_overlap 2420278, overlap 2420277 2420270 TTAGCCATAAAAAAA CCACGA TAAA TCGTGG GTTTTGTATTTACAG TERM 2861 2420293 - 2420278 - T 95 -9 -5.64274 | opp_overlap 2420277 2420270 2420278 TTAGCCATAAAAAAA CCACGA TAAA TCGTGG GTTTTGTATTTACAG glnA 2421728 - 2420313 - | glutamine synthetase TERM 2862 2421966 - 2421952 - H 73 -4.2 -4.99035 | opp_overlap 2421952 2421951 TCACCCACACAAAAA GCATCA TAT TGGTGC ATATTTTTATAATTG ACIAD2460 2422351 - 2422860 + | hypothetical protein trpG 2423066 - 2423650 + | anthranilate synthase component II (glutamine amido-transferase) trpD 2423651 - 2424700 + | anthranilate phosphoribosyltransferase TERM 2863 2424919 - 2424897 - gT 93 -2.6 -5.95539 | opp_overlap 2424901 2424903, overlap 2424898 2424899 GCCGAAATAAAAAAA GCCTCACCTT CTA AAGGTGTGAT TCGGGCTGATTTTAA TERM 2864 2425117 - 2425131 + GT 71 -4.3 -4.81852 | TCGAAGCACGTGCTT TACAG GCAGA CTGTA TTTTATTGATTGTCG trpC 2424660 - 2425517 + | indole-3-glycerol-phosphate synthase TERM 2865 2425531 - 2425563 + T 78 -7.2 -4.38927 | opp_overlap 2425533 2425534, overlap 2425534 AAACAAATTTTGTTA AAGCAATAGCAAAT TGAAC ATTTGCTATTGTTG TTTCTTCTCTAACCA TERM 2866 2425561 - 2425533 - T 71 -7.6 -3.56862 | opp_overlap 2425531 2425534, overlap 2425534 ACAAATTTTGTTAAA GCAATAGCAAAT TGAAC ATTTGCTATTGT TGTTTCTTCTCTAAC TERM 2867 2425560 - 2425534 - T 81 -11.1 -2.73635 | opp_overlap 2425531 2425534, overlap 2425533 CAAATTTTGTTAAAG CAATAGCAAAT TGAAC ATTTGCTATTG TTGTTTCTTCTCTAA TERM 2868 2425534 - 2425560 + T 100 -11.1 -4.30793 | opp_overlap 2425534 2425533, overlap 2425531 CAAATTTTGTTAAAG CAATAGCAAAT TGAAC ATTTGCTATTG TTGTTTCTTCTCTAA ACIAD2464 2426040 - 2425555 - | hypothetical protein ACIAD2465 2426144 - 2426806 + | hypothetical protein TERM 2869 2426797 - 2426826 + T 72 -8.1 -3.38218 | opp_overlap 2426804, overlap 2426804 TCCAAAATATGAACA AAAAAAATGATTC ACTT GAATCATTTTTTG TTATCAAATATTTGA TERM 2870 2426819 - 2426804 - T 95 -6.2 -6.13503 | opp_overlap 2426804 2426797 TATGAACAAAAAAAA TGATTC ACTT GAATCA TTTTTTGTTATCAAA TERM 2871 2426804 - 2426819 + T 86 -6.2 -5.55769 | opp_overlap 2426804, overlap 2426797 TATGAACAAAAAAAA TGATTC ACTT GAATCA TTTTTTGTTATCAAA ACIAD2466 2427818 - 2426817 - | putative xanthine dehydrogenase protein; putative xanthine dehydrogenase accessory factor (XdhC) xdhB 2430214 - 2427833 - | xanthine dehydrogenase, large subunit TERM 2872 2429299 - 2429283 - G 74 -9.5 -3.31915 | opp_overlap 2429281, overlap 2429281 2429280 2429286 TCTGCAGAAAAACCA CAATTGG ATG CCAATTG CACTTTTAATCCCTG TERM 2873 2429651 - 2429638 - G 74 -6.7 -4.32177 | GCACCGCATAAGAAA TCTGG CCTT CCAGA TAAAAATGCTCTTGC TERM 2874 2429938 - 2429948 + g 70 -5.4 -4.4521 | opp_overlap 2429938, overlap 2429935 GATCGTCATTGACAA TTGG GCC CCAA TTATTTTTGACTGCT TERM 2875 2430062 - 2430078 + g 70 -8 -3.70689 | opp_overlap 2430061 2430060 2430064 ACATTGCGAGAAACC CACTGC CAGAT GCAGTG TATTTTCAAGTTCTG xdhA 2431712 - 2430216 - | xanthine dehydrogenase, small subunit folE2 2432069 - 2432662 + | GTP cyclohydrolase I TERM 2876 2433194 - 2433210 + G 73 -2.9 -5.24449 | opp_overlap 2433194 TGCAGCAGGATCAAG CGGGATG AAT TATACCG TTTTTTCGATTTATA ACIAD2471 2432766 - 2433317 + | putative DedA family protein TERM 2877 2434629 - 2434656 + G 70 -5.6 -4.30448 | gap 1, overlap 2434632 2434635 ATCCTTCCGTGTTCT TTG-CAGCAGCAC TCT GTGCTGTTGTCGG TTTTGGATTAAATTT TERM 2878 2434632 - 2434652 + G 83 -11.9 -2.77861 | overlap 2434629 2434635 CTTCCGTGTTCTTTG CAGCAGCAC TCT GTGCTGTTG TCGGTTTTGGATTAA TERM 2879 2434635 - 2434649 + G 78 -10 -3.52515 | overlap 2434632 2434629 CCGTGTTCTTTGCAG CAGCAC TCT GTGCTG TTGTCGGTTTTGGAT ACIAD2472 2433503 - 2434714 + | hypothetical protein ACIAD2473 2435548 - 2434742 - | hypothetical protein TERM 2880 2435513 - 2435492 - G 93 -10.9 -4.22748 | opp_overlap 2435495 CAGTAACAAACCAAA CAAGGCAGC CGAA GCTGCCTTA AATACAAATAAACTG TERM 2881 2435495 - 2435510 + g 76 -10.4 -3.06183 | opp_overlap 2435492 TAACAAACCAAACAA GGCAGC CGAA GCTGCC TTAAATACAAATAAA hemE 2436629 - 2435553 - | uroporphyrinogen decarboxylase TERM 2882 2436449 - 2436413 - G 81 -5.1 -5.09259 | TATCGGAAAATAAAA TTGCAGCATCTAAATCA TAA CGACGTAGCGGCTGCAA AGTGACTTCACAGGC TERM 2883 2437254 - 2437234 - g 79 -11.1 -2.9704 | ATAAACACGCAGATA GTGGGGCTG CCC CAGCCACAC CTGCAACTAAAACCA ACIAD2475 2436822 - 2438210 + | putative signal peptide TERM 2884 2438248 - 2438231 - f 90 -11.3 -3.55801 | opp_overlap 2438231 ATTAAGCTTTTCAAA GCCTGCA AATA TGCAGGC TTTCTTATGCTTACC TERM 2885 2438231 - 2438248 + F 100 -11.3 -4.3953 | opp_overlap 2438231 ATTAAGCTTTTCAAA GCCTGCA AATA TGCAGGC TTTCTTATGCTTACC TERM 2886 2438365 - 2438349 - f 90 -8.1 -4.84274 | opp_overlap 2438348, overlap 2438340 CAATCATATTAAAAA TAGAACA ATA TGTTCTA CTACTTATGTTTTTA TERM 2887 2439000 - 2438987 - g 71 -6.7 -4.21194 | opp_overlap 2438986 TGCCACCACTCAAAA GCACA ATTA TGTGC ATGTGGTAAAAGGCC ACIAD2476 2438442 - 2439131 + | hypothetical protein TERM 2888 2439146 - 2439171 + T 84 -8.3 -4.55209 | opp_overlap 2439148, overlap 2439148 2439161 ACCTATAAATAATGA TACGCTGTTTC GGAA GAAGCGGCGTG TTTCTTTAATGTGTA TERM 2889 2439148 - 2439169 + T 79 -8.7 -3.8721 | opp_overlap 2439148, overlap 2439146 2439161 CTATAAATAATGATA CGCTGTTTC GGAA GAAGCGGCG TGTTTCTTTAATGTG ACIAD2477 2442413 - 2439177 - | hypothetical protein TERM 2890 2441168 - 2441185 + g 79 -8.4 -4.14392 | opp_overlap 2441167 GCAAGGTACAAGCAG CGCGCA AATTCA TGCGCG TTTTACCACTTCCAG TERM 2891 2441954 - 2441989 + g 73 -2.7 -5.24129 | gap 1, opp_overlap 2441963, overlap 2441965 GTTGTTGCAATAATT TTAGAGACAGCCATTC ATGTC GAATGTCA-TCTCTAA TTTTTTGTCCCGCCA TERM 2892 2442114 - 2442128 + g 73 -2.8 -5.1675 | CCATTCATCTAACAT CAGTAG TTT TTGCTG TTTTTTGATCGATGC TERM 2893 2442501 - 2442515 + H 89 -8.6 -4.30885 | opp_overlap 2442501 2442500 2442490 AATACAGTCCTAAAG CGACAT CTA ATGTCG TTTTAAATCTATTTT ACIAD2479 2442800 - 2443189 + | hypothetical protein TERM 2894 2443232 - 2443199 - f 77 -9.1 -3.25088 | gap 1, opp_overlap 2443193 2443200 2443201 2443203, overlap 2443201 TCTTAAATCTACGAA GATATTATTGCGACAT TTG ATGTCGCAATACTA-C TTAATATTTATCTAA TERM 2895 2443200 - 2443232 + F 80 -9.3 -3.52522 | opp_overlap 2443199 2443201, overlap 2443193 2443201 2443203 CTTAAATCTACGAAG ATATTATTGCGACAT TTG ATGTCGCAATACTAC TTAATATTTATCTAA TERM 2896 2443201 - 2443231 + F 86 -12.8 -2.7079 | opp_overlap 2443199 2443201, overlap 2443200 2443193 2443203 TTAAATCTACGAAGA TATTATTGCGACAT TTG ATGTCGCAATACTA CTTAATATTTATCTA TERM 2897 2443231 - 2443201 - f 91 -12.8 -3.18776 | opp_overlap 2443201 2443200 2443193 2443203, overlap 2443199 TTAAATCTACGAAGA TATTATTGCGACAT TTG ATGTCGCAATACTA CTTAATATTTATCTA TERM 2898 2443203 - 2443229 + F 81 -11 -2.88491 | opp_overlap 2443201 2443199, overlap 2443201 2443200 2443193 AAATCTACGAAGATA TTATTGCGACAT TTG ATGTCGCAATAC TACTTAATATTTATC ACIAD2480 2443261 - 2444466 + | hypothetical protein ACIAD2481 2444463 - 2445347 + | hypothetical protein TERM 2899 2446237 - 2446209 - g 76 -9.7 -3.25088 | opp_overlap 2446215, overlap 2446212 2446215 TCGGAAATGCACTAA GAACAATTGATAC TTG GTATCCATCGTTC AAAGAAAATGATGAA ACIAD2482 2445377 - 2446438 + | hypothetical protein TERM 2900 2447008 - 2447030 + G 79 -7.7 -4.3467 | CTGCCAGATAGCTAC GGACTTGCC CGTAA GGAAAGTCC TTTTGCTCTACCCGT ACIAD2483 2446441 - 2447052 + | hypothetical protein ACIAD2484 2447064 - 2448017 + | hypothetical protein TERM 2901 2450075 - 2450087 + T 71 -3.3 -5.17576 | GAAAGCGGTAGCTGG CGCGG TGT TTGCG TTTTTTGGGTTCGTC TERM 2902 2450741 - 2450751 + T 74 -5.4 -4.73613 | TCTTAGCTGCATCAC GCAA GAT TTGC TTTTGTTCGTCATCG ACIAD2500 2454584 - 2453622 - | putative two-component response regulator protein ACIAD2501 2458045 - 2454581 - | putative two-component sensor kinase TERM 2903 2457250 - 2457264 + g 80 -2.8 -5.57888 | opp_overlap 2457250 CACCCAGAAATACAG CCAGAT GCC ATGTGG TTTTATTTTTTTCCT TERM 2904 2458772 - 2458786 + G 73 -10 -2.93703 | opp_overlap 2458765 CCTAAGTACCTTACA GGTGTG GAC CACACC TATCTGGCTCATTCT TERM 2905 2459546 - 2459573 + G 73 -2.6 -5.17576 | overlap 2459544 CCTCATCTCATTCCT TGCAGCAGCAGG TCTC TCTATTGCAGCA TTTTTTGGATTACTG ACIAD2502 2458236 - 2459858 + | hypothetical protein TERM 2906 2459862 - 2459915 + F 77 -8.9 -3.53012 | opp_overlap 2459872 2459875, overlap 2459875 ATGGATAAATAGATT TTATTGAAGACAACTGAGCCGCGCT ATAC AGCGTGGCTCAGTTGTAGCAAGTGA TTTGAAAAACAAGAA TERM 2907 2459905 - 2459872 - f 100 -19.7 -3.09505 | opp_overlap 2459862 2459875, overlap 2459875 AGATTTTATTGAAGA CAACTGAGCCGCGCT ATAC AGCGTGGCTCAGTTG TAGCAAGTGATTTGA TERM 2908 2459875 - 2459902 + F 100 -17.8 -3.30619 | opp_overlap 2459872 2459875, overlap 2459862 TTTTATTGAAGACAA CTGAGCCGCGCT ATAC AGCGTGGCTCAG TTGTAGCAAGTGATT TERM 2909 2459902 - 2459875 - f 100 -15.6 -3.68988 | opp_overlap 2459875 2459862, overlap 2459872 TTTTATTGAAGACAA CTGAGCCGCGCT ATAC AGCGTGGCTCAG TTGTAGCAAGTGATT pqqA 2460086 - 2460157 + | coenzyme PQQ synthesis protein A (coenzyme PQQ synthesis protein IV) TERM 2910 2460195 - 2460176 - f 89 -10.8 -3.54129 | opp_overlap 2460176 GACAGTTTTCTGAAA CATCCACA TTTT TGTGGATG TTTTTCATTTTAACT TERM 2911 2460176 - 2460195 + F 100 -10.8 -5.10154 | opp_overlap 2460176 GACAGTTTTCTGAAA CATCCACA TTTT TGTGGATG TTTTTCATTTTAACT pqqB 2460231 - 2461145 + | pyrroloquinoline quinone biosynthesis protein PqqB TERM 2912 2461571 - 2461585 + GF 75 -5.7 -4.59773 | AAGAAGCTGCATGTA GTTCG CTTAC CGAAC TTTTTGCACCTGCCA pqqC 2461135 - 2461902 + | pyrroloquinoline quinone biosynthesis protein PqqC TERM 2913 2462154 - 2462142 - gf 73 -9.1 -2.78508 | opp_overlap 2462140, overlap 2462141 2462139 GAGTTTTTAAAACAG GCCGA ATC TCGGC AGTGGATTTGCTTGC pqqD 2461875 - 2462174 + | pyrroloquinoline quinone biosynthesis protein PqqD TERM 2914 2462498 - 2462524 + G 73 -8.8 -3.53811 | opp_overlap 2462498, overlap 2462491 2462490 GCCGAGTTCAGCGAA GCTGGTTTGGAT CAT ATTCAGATCAGC TTTCAGGCCAGTGAC TERM 2915 2462632 - 2462618 - g 82 -5.7 -5.02074 | TTAGCGGTCAAAAAA CATCG CTATC CGATG GTACTAAACTTTGTA TERM 2916 2462723 - 2462737 + G 74 -6.4 -4.42386 | overlap 2462724 GCAGATTATGTCGAA TTGGCA ACC TGCCAG TTTTATGGCTGGGCC pqqE 2462156 - 2463331 + | pyrroloquinoline quinone biosynthesis protein PqqE acdP 2463328 - 2464374 + | Zn-dependent dipeptidase TERM 2917 2464409 - 2464391 - T 84 -3.8 -5.75342 | opp_overlap 2464391 TTTTGGCAAAAAAAA GACGGC CGTCAAT ACCGTC TTTGAAAAGATAACA bdhA 2465213 - 2464428 - | 3-hydroxybutyrate dehydrogenase TERM 2918 2465261 - 2465240 - R 88 -7.3 -5.0538 | opp_overlap 2465240, overlap 2465257 GTCTATTTTAAAAAA CCTTGCAGT CAAA AATGCAAGG TCTAATCTTGATGGA ACIAD2510 2466706 - 2465288 - | hypothetical protein TERM 2919 2466402 - 2466412 + g 71 -3.2 -5.00884 | CCCAGCAATACCACG GTCA AAA TGGC TTTTTTGGCGCCAAT ACIAD2511 2467153 - 2468073 + | LysR family transcriptional regulator TERM 2920 2468588 - 2468601 + G 82 -8.1 -4.56597 | CTGCGTGCTGGTGGT GCAGG CATC CCTGC TTTTTACACGCAAAC atoD 2468252 - 2468956 + | acetoacetyl-CoA transferase, alpha subunit TERM 2921 2469189 - 2469201 + G 75 -5.5 -4.86001 | opp_overlap 2469176 AACCGTCACTGCTCG TGCGG GTG CTGCA TTTTTCTCAAGTAGT atoA 2468959 - 2469603 + | acetoacetyl-CoA transferase, beta subunit TERM 2922 2469642 - 2469626 - f 75 -8 -3.7319 | AGTTAGAACAGATAA GGTTCC ATGAA GGAACC TAAAAATAAAGCGTG TERM 2923 2469682 - 2469653 - f 77 -5.7 -4.91473 | gap 1, overlap 2469655 GAACCTAAAAATAAA GCGTGATC-GGCTC AAT GAGACTGATCACTC AAAATACAATAAAAG TERM 2924 2469820 - 2469872 + G 78 -10 -3.55203 | gap 1 TTGGCGTCATTATTG TGTCGCTTGCCGCAATTTTCATTGG TGCG CCAGTCAAAGATGTGGCAGGCG-CA TTTGGAAACGGTTTT TERM 2925 2469998 - 2469985 - g 76 -6.7 -4.43501 | overlap 2469974 AACTCATTCAGAAAA TGGCA CGTT TGCCA CATTCAGGTCGCGGT atoE 2469711 - 2471120 + | short-chain fatty acid transporter atoB 2471171 - 2472355 + | acetyl-CoA acetyltransferase TERM 2926 2472369 - 2472393 + T 87 -12.9 -2.68799 | opp_overlap 2472369 2472377, overlap 2472363 2472362 AAACCCAAATATAAA GGACGGAACAT GTC ATGATCCGTCC TGATATGGATTTAAT TERM 2927 2472393 - 2472369 - T 100 -12.9 -4.37554 | opp_overlap 2472369 2472363 2472362, overlap 2472377 AAACCCAAATATAAA GGACGGAACAT GTC ATGATCCGTCC TGATATGGATTTAAT bccA 2474210 - 2472480 - | bifunctional biotin carboxylase/biotin carboxyl carrier protein TERM 2928 2472692 - 2472706 + g 70 -2.8 -5.02074 | overlap 2472694 CACGTAAATCATTCG TAGTCA AAC TGGCTG TTTTTTCAGAACTGG ACIAD2518 2475805 - 2474207 - | putative allophanate hydrolase subunit 1 and 2 TERM 2929 2475139 - 2475115 - G 70 -3.5 -4.8143 | GTAATAATTCAAAAA CAGGCTGAAGA TGT TGCTCAGGCTG CCTAGGTATTTTAAT ACIAD2519 2476636 - 2475824 - | hypothetical protein ACIAD2520 2477401 - 2476637 - | hypothetical protein ACIAD2521 2478640 - 2477414 - | hypothetical protein TERM 2930 2478702 - 2478728 + r 73 -4.4 -5.00851 | overlap 2478706 2478709 CCTAAAGTAGAAGCA GTTTTAAGCTGT GAT ACAGCTTGTGGC TTTTATTTAATTAAT TERM 2931 2478709 - 2478721 + r 71 -7.7 -3.56811 | overlap 2478706 2478702 TAGAAGCAGTTTTAA GCTGT GAT ACAGC TTGTGGCTTTTATTT TERM 2932 2478913 - 2478901 - R 80 -4.9 -5.28942 | overlap 2478907 TATTTTAAATAAAAA CAATA TGT TATTG GTGCATCATGCACAA ACIAD2522 2479932 - 2479003 - | putative transcriptional regulator TERM 2933 2479063 - 2479049 - G 71 -8.6 -3.55622 | opp_overlap 2479051 TTCAATTTGCGTAAA GATTGC TGA GCAATC TGATAAGCCATTTTA TERM 2934 2481145 - 2481112 - g 73 -5.3 -4.62783 | opp_overlap 2481114 2481118, overlap 2481114 2481116 CAGGCACTTGAAAAA CATATACAGAGCGCT CAGA AACGCTCCGTAGATT ATTTAAAAGTATTTT TERM 2935 2481143 - 2481114 - g 74 -7.9 -3.92746 | opp_overlap 2481114 2481118, overlap 2481112 2481116 GGCACTTGAAAAACA TATACAGAGCGCT CAGA AACGCTCCGTAGA TTATTTAAAAGTATT TERM 2936 2481141 - 2481116 - g 80 -10.5 -3.54926 | opp_overlap 2481114 2481118, overlap 2481114 2481112 CACTTGAAAAACATA TACAGAGCGCT CAGA AACGCTCCGTA GATTATTTAAAAGTA ACIAD2523 2480209 - 2481210 + | putative transcriptional regulator ACIAD2524 2482407 - 2481226 - | ABC transporter periplasmic substrate-binding protein TERM 2937 2482809 - 2482776 - R 100 -14.1 -5.56263 | opp_overlap 2482776 2482779 2482785 ACTACAAAATAAAAA TAAGAAAAAGCACCC TTTT GGATGCTTTTTCTCA TATTAAGATGACTGT TERM 2938 2482776 - 2482809 + r 77 -9.7 -3.06671 | opp_overlap 2482776, overlap 2482779 2482785 ACTACAAAATAAAAA TAAGAAAAAGCACCC TTTT GGATGCTTTTTCTCA TATTAAGATGACTGT TERM 2939 2482779 - 2482806 + r 83 -11.4 -2.75074 | opp_overlap 2482776, overlap 2482776 2482785 ACAAAATAAAAATAA GAAAAAGCACCC TTTT GGATGCTTTTTC TCATATTAAGATGAC TERM 2940 2482785 - 2482800 + r 73 -4.6 -4.98436 | opp_overlap 2482776, overlap 2482779 2482776 TAAAAATAAGAAAAA GCACCC TTTT GGATGC TTTTTCTCATATTAA ACIAD2525 2484168 - 2482834 - | putative glutamate synthase large subunit (GlxD) TERM 2941 2483348 - 2483337 - G 73 -5.8 -4.55118 | GAATGGCAGATAAAA TCGG AATA CCGA CATGCTCGATAAACA TERM 2942 2483465 - 2483484 + g 73 -5.1 -4.61633 | TAAGGACGACTTGCT CCAATTT TGACAT AAATTGG TTTTTCCCAGTCTGT ACIAD2526 2484924 - 2484196 - | putative formyl-methanofuran dehydrogenase (GlxC) ACIAD2527 2485878 - 2484955 - | putative glutamine amidotransferase-like protein (GlxB) glnT 2487317 - 2485926 - | glutamine synthetase III TERM 2943 2486414 - 2486404 - G 82 -6.8 -4.82901 | GTGGGCGCACAAAAA GCAC AGA GTGC TGGACCATGCTCAAG ACIAD2530 2487606 - 2488202 + | putative transcriptional regulator ACIAD2531 2489451 - 2488300 - | MFS superfamily arabinose exporter TERM 2944 2490241 - 2490254 + G 71 -6.7 -4.16842 | CTGGCTTAGGTATTG GTCTG TTGC CAGAC TTTATTGCAAATCAA ACIAD2533 2489550 - 2490416 + | LysR family transcriptional regulator ACIAD2534 2490601 - 2491911 + | putative ammonium transporter TERM 2945 2491961 - 2491984 + T 100 -11.2 -5.08011 | opp_overlap 2491961 CAGATCCATCAAAAA TAAGAACCTA AATT TAGGTTCTTA TTTTTTGCAGGTTTT TERM 2946 2491984 - 2491961 - T 100 -11.2 -4.76041 | opp_overlap 2491961 CAGATCCATCAAAAA TAAGAACCTA AATT TAGGTTCTTA TTTTTTGCAGGTTTT ACIAD2535 2493486 - 2492005 - | MFS family transporter TERM 2947 2492783 - 2492763 - G 79 -8.3 -4.20084 | opp_overlap 2492764, overlap 2492764 ACGATTCACGTAAAA TTTTGGCAG CTC CTGCCAAAT TGCCTTGATTGGCTA TERM 2948 2492764 - 2492782 + g 89 -11.8 -3.24166 | opp_overlap 2492763 2492764 CGATTCACGTAAAAT TTTGGCAG CTC CTGCCAAA TTGCCTTGATTGGCT TERM 2949 2492782 - 2492764 - G 86 -11.8 -3.11569 | opp_overlap 2492764, overlap 2492763 CGATTCACGTAAAAT TTTGGCAG CTC CTGCCAAA TTGCCTTGATTGGCT ACIAD2536 2494989 - 2493631 - | putative coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductase TERM 2950 2495157 - 2495131 - R 74 -6.1 -4.54323 | gap 1, opp_overlap 2495132, overlap 2495133 AACTATAATAACAAA TAGATCCATTAT CTTA ATAATGGATC-A TGATATTCATTTTAA TERM 2951 2495156 - 2495133 - R 90 -11.2 -3.86244 | opp_overlap 2495132, overlap 2495131 CTATAATAACAAATA GATCCATTAT CTTA ATAATGGATC ATGATATTCATTTTA ACIAD2537 2496498 - 2495185 - | putative acyl-CoA dehydrogenase ACIAD2538 2497248 - 2496859 - | putative gamma-carboxymuconolactone decarboxylase gabD 2498696 - 2497245 - | succinate-semialdehyde dehydrogenase ACIAD2540 2500015 - 2498849 - | putative signal peptide TERM 2952 2499196 - 2499208 + g 79 -7.7 -4.25056 | opp_overlap 2499195 2499192 TCACCGAATAATCAG GATGC AAT GCATC TTTATTGGTCACGTC ACIAD2541 2501442 - 2500039 - | putative purine cytosine permease TERM 2953 2500619 - 2500607 - G 74 -6.9 -4.37502 | opp_overlap 2500607 2500616 AGCACCATACCAAAA CCACC TGT GGCGG TTTTCACGGCTTCCA TERM 2954 2501119 - 2501101 - G 73 -7.4 -4.17698 | ACCCAGATAGATAAA GGTGGTGA AGA TCACGACC AGTAAAGCACCATAA TERM 2955 2501484 - 2501505 + r 88 -5.9 -5.59655 | opp_overlap 2501484, overlap 2501502 TGACCCAGATGACAA TTCCAATCA TTCT TGATAGGAA TTTTTTATTCCTTTA ACIAD2542 2503275 - 2501809 - | putative aldehyde dehydrogenase TERM 2956 2502689 - 2502702 + gr 70 -8.1 -3.19656 | opp_overlap 2502689 ACATTGACCACACCA GCAGG AAAG CCTGC TTCATCAATCAATTT TERM 2957 2503138 - 2503123 - GR 71 -5.4 -4.5442 | gap 1 GCTTGAATCATAAAA TGCCTGC TCA GC-GGCA TCTACAGCACGATTG ACIAD2543 2504332 - 2503250 - | putative monooxygenase oxidoreductase protein ACIAD2544 2505267 - 2504335 - | putative monooxygenase oxydoreductase protein ACIAD2545 2506088 - 2505297 - | putative hydrolase TERM 2958 2506001 - 2506031 + gr 87 -11.2 -3.15861 | opp_overlap 2506010 CCTGCATACCCACAC CGTGAATGAGAACC AGT GGTTCTCCTTCACC TTGCTCAAAATAATG ACIAD2546 2506659 - 2506057 - | hypothetical protein TERM 2959 2506882 - 2506852 - g 79 -11.2 -3.16785 | opp_overlap 2506854, overlap 2506850 TATTACATTAAGAGA GATGGCATTGACCA ATC TGCGCAATGCCATC ATTACAGGCTATTTC TERM 2960 2507112 - 2507094 - g 73 -7.4 -4.18934 | TATTACTTGAACAAA GTGCAGTC GTT GACTGTAC TGAAAAACTTGACGA TERM 2961 2507421 - 2507408 - g 70 -8.1 -3.68886 | ACCAATGCAGCCAAA GCAGC CGTT GCTGC ACATCTACAAGAAGC ACIAD2547 2506793 - 2507485 + | GntR family transcriptional regulator ACIAD2548 2507502 - 2507795 + | hypothetical protein TERM 2962 2507852 - 2507824 - T 93 -7.6 -5.63103 | overlap 2507835 TGCCAATCAAAAAAA GGACAAATATAT TGGGC AGATATTTGTCC AAAAGCGAGTCAATC TERM 2963 2507868 - 2507901 + T 90 -11.2 -3.66874 | opp_overlap 2507857 2507895, overlap 2507857 AAAAGCGAGTCAATC GCGTTCATCATTTT AATGGG GAAGTGATGAACGC TTTCAATGACCTTCC ACIAD2549 2508592 - 2507921 - | putative sarcosine oxidase gamma subunit protein (SoxG) soxA 2511516 - 2508595 - | sarcosine oxidase (alpha subunit) oxidoreductase protein TERM 2964 2508812 - 2508822 + g 75 -5.4 -4.85177 | TCAAGCACAATATGC CCTT CTA AAGG TTTTTCCTGTGATTT TERM 2965 2509412 - 2509402 - G 70 -5.4 -4.52589 | GGCGGTCACATAAAA GTGA TGC TCAC TCAAGCGTGCGGCAA soxD 2511839 - 2511513 - | sarcosine oxidase subunit D soxB 2513090 - 2511852 - | sarcosine oxidase beta subunit TERM 2966 2512655 - 2512686 + g 100 -14.6 -3.23274 | opp_overlap 2512658 2512661, overlap 2512658 TAATTTGCTTTCGAT CAATCATTTCGGTG CGGC CACCGAAATGCTTG TTGACTTCTGCACGC TERM 2967 2512683 - 2512658 - G 77 -10.5 -3.14132 | opp_overlap 2512655 2512658, overlap 2512661 TTTGCTTTCGATCAA TCATTTCGGTG CGGC CACCGAAATGC TTGTTGACTTCTGCA TERM 2968 2512658 - 2512683 + g 86 -10.5 -3.75766 | opp_overlap 2512658 2512661, overlap 2512655 TTTGCTTTCGATCAA TCATTTCGGTG CGGC CACCGAAATGC TTGTTGACTTCTGCA TERM 2969 2512680 - 2512661 - G 77 -10.8 -2.77899 | opp_overlap 2512658 2512655, overlap 2512658 GCTTTCGATCAATCA TTTCGGTG CGGC CACCGAAA TGCTTGTTGACTTCT TERM 2970 2513106 - 2513121 + r 72 -6.1 -4.40993 | GGTGTATTTCTCCGC GGCGT GTCATA ACGCC TTTTCATCATTTATA folD 2514025 - 2513132 - | bifunctional protein 5,10-methylene-tetrahydrofolate dehydrogenase/5,10-methylene-tetrahydrofolate cyclohydrolase purU 2514888 - 2514022 - | formyltetrahydrofolate deformylase TERM 2971 2514656 - 2514675 + g 75 -2.1 -5.30616 | opp_overlap 2514656 GCCTTCATTGCAAAC TTGGCAG TGACAT CTGCAAA TTTTTCTTTGAGTAA TERM 2972 2515137 - 2515105 - R 100 -17.2 -3.56643 | opp_overlap 2515108 TTTAGATGTGCCAAA GCACGGGCAATACA GTTGA TGTATTACCCGTGC TTAAAACTGGATTAA TERM 2973 2515108 - 2515134 + r 72 -9.5 -2.72463 | opp_overlap 2515105 AGATGTGCCAAAGCA CGGGCAATACA GTTGA TGTATTACCCG TGCTTAAAACTGGAT ACIAD2555 2515451 - 2515149 - | hypothetical protein TERM 2974 2515489 - 2515501 + H 95 -6.3 -5.82316 | opp_overlap 2515489 2515487 TTAAAAACCAAAATA TTCCT TAT AGGAA TTTTTTTTGCATCAT ACIAD2556 2515737 - 2516777 + | putative 2-nitropropane dioxygenase ACIAD2557 2517804 - 2516779 - | hypothetical protein TERM 2975 2517364 - 2517386 + g 71 -4.8 -4.62069 | AAGAATATTTTCCTG CCCATTTAAG AAA CCTAAACGGG TTTTTAGCGTCACAG TERM 2976 2517632 - 2517644 + g 87 -4.7 -5.58074 | TCTCCATCAAAATTG GCCCG ATA CAGGC TTTTTTTACTCATTC ACIAD2558 2517887 - 2519098 + | hypothetical protein ACIAD2559 2519101 - 2519718 + | putative phosphoserine phosphatase TERM 2977 2519709 - 2519724 + T 100 -10.4 -4.58283 | opp_overlap 2519709 TCAAGCTGTAAAAAA GCTCGC CTAA GCGAGC TTTTTACAGGACTTA TERM 2978 2519724 - 2519709 - T 100 -10.4 -5.055 | opp_overlap 2519709 TCAAGCTGTAAAAAA GCTCGC CTAA GCGAGC TTTTTACAGGACTTA proB 2520879 - 2519746 - | gamma-glutamyl kinase obgE 2522100 - 2520898 - | GTPase ObgE TERM 2979 2522224 - 2522240 + r 70 -3.7 -4.86385 | opp_overlap 2522224 CACCTGAAAAAACGA TACAGTC CAT GACTCTA TTTCTTTTTAAGGAT ACIAD2563 2522928 - 2522248 - | hypothetical protein TERM 2980 2522469 - 2522480 + g 71 -4.4 -4.87291 | TAATTTTGATCGGTA GAAC ATAA GTTC TTTTTAATTGAAATG TERM 2981 2522665 - 2522679 + g 78 -10 -3.56092 | opp_overlap 2522657 2522656 2522664 2522663 TGTAAAGGCCAAATT GGCAAG ATA CTTGCC TTTCAAAGGTAATGA TERM 2982 2522901 - 2522891 - G 78 -5.4 -5.06103 | ACAATGCCCAAAAAA CTGA TCA TCAG ACGTTTTACAGAACC ACIAD2564 2523674 - 2522937 - | hypothetical protein TERM 2983 2523808 - 2523791 - R 100 -9.9 -5.26918 | opp_overlap 2523791 ACATTTGACAAAAAA GCTCAGT CGAA ACTGAGC TTTTAAATCTATTGA TERM 2984 2523791 - 2523808 + r 100 -9.9 -4.28375 | opp_overlap 2523791 ACATTTGACAAAAAA GCTCAGT CGAA ACTGAGC TTTTAAATCTATTGA gap 2525289 - 2523832 - | glyceraldehyde-3-phosphate dehydrogenase rarD 2526468 - 2525536 - | chloramphenicol-sensitive protein TERM 2985 2525678 - 2525690 + g 78 -4.1 -5.24129 | ATATAGGTTAACCAC TCTTG AGA CGAGA TTTTTTCTCCCAGCA TERM 2986 2526216 - 2526205 - G 71 -4.4 -4.82901 | GGGTGCCCACAAAAA CAAC CAGA GTTG CAAAGACACCAGTAC TERM 2987 2526537 - 2526563 + r 100 -16.8 -3.91488 | opp_overlap 2526537 2526543, overlap 2526543 AAGACCTCAGTTAAA GAAAAACCATGC AAA GCATGGTTTTTC TTGTTTACCAAAATT TERM 2988 2526563 - 2526537 - R 100 -16.8 -3.66646 | opp_overlap 2526537 2526543, overlap 2526543 AAGACCTCAGTTAAA GAAAAACCATGC AAA GCATGGTTTTTC TTGTTTACCAAAATT TERM 2989 2526543 - 2526557 + r 100 -10 -5.38549 | opp_overlap 2526537 2526543, overlap 2526537 TCAGTTAAAGAAAAA CCATGC AAA GCATGG TTTTTCTTGTTTACC TERM 2990 2526557 - 2526543 - R 100 -10 -5.30616 | opp_overlap 2526543 2526537, overlap 2526537 TCAGTTAAAGAAAAA CCATGC AAA GCATGG TTTTTCTTGTTTACC ACIAD2568 2527171 - 2526581 - | putative outer membrane lipoprotein TERM 2991 2527223 - 2527233 + r 74 -5.4 -4.72201 | TATAAAGATCTAGTT GCTA CAT TAGC TTGTTTTTTATGCAG uvrB 2529326 - 2527299 - | excinuclease ABC subunit B ACIAD2570 2530099 - 2529407 - | putative cell-cell signaling protein, C-factor (CsgA) ACIAD2571 2530282 - 2531115 + | hypothetical protein TERM 2992 2532514 - 2532501 - g 71 -6.7 -4.20516 | opp_overlap 2532500 CTGGTACCGAAGAAA CTGCA GTAA TGCAG ATCTTACAAACCATT ACIAD2572 2531243 - 2532688 + | putative GGDEF family protein TERM 2993 2532969 - 2532948 - T 93 -7.3 -5.4505 | gap 1, opp_overlap 2532948 TTTCCCAATAAAAAA CTCCATACGC AAT GCGC-TGGAG TTTTTAAATTGACAG TERM 2994 2532948 - 2532969 + T 72 -5.1 -4.74103 | gap 1, opp_overlap 2532948 TTTCCCAATAAAAAA CTCCATACGC AAT GCGC-TGGAG TTTTTAAATTGACAG ACIAD2573 2533194 - 2533012 - | hypothetical protein TERM 2995 2533646 - 2533636 - g 78 -5.4 -5.02074 | CCAGGCCTGAAAAAA GCAA TTA TTGC AAAATTTAAACGTGA aspC 2533408 - 2534640 + | aspartate aminotransferase A TERM 2996 2534644 - 2534690 + T 100 -10.7 -4.65078 | gap 1, opp_overlap 2534660, overlap 2534648 2534648 2534660 AAGAATGCTTAATCG TATCTAAATAAAAAAACCTATC TTCG GATAGGTTTTTTTATTTC-ATA TTTTGTTCAAACTAT TERM 2997 2534648 - 2534687 + T 93 -14 -2.95538 | opp_overlap 2534660, overlap 2534644 2534648 2534660 ATGCTTAATCGTATC TAAATAAAAAAACCTATC TTCG GATAGGTTTTTTTATTTC ATATTTTGTTCAAAC TERM 2998 2534648 - 2534688 + T 100 -12.4 -3.93768 | gap 1, opp_overlap 2534660, overlap 2534648 2534644 2534660 ATGCTTAATCGTATC T-AAATAAAAAAACCTATC TTCG GATAGGTTTTTTTATTTCA TATTTTGTTCAAACT TERM 2999 2534675 - 2534660 - T 100 -7.6 -5.96894 | opp_overlap 2534648 2534648 2534644 2534660 ATCTAAATAAAAAAA CCTATC TTCG GATAGG TTTTTTTATTTCATA TERM 3000 2534660 - 2534675 + T 100 -7.6 -5.99154 | opp_overlap 2534660, overlap 2534648 2534648 2534644 ATCTAAATAAAAAAA CCTATC TTCG GATAGG TTTTTTTATTTCATA ACIAD2575 2535270 - 2534749 - | hypothetical protein TERM 3001 2535231 - 2535252 + g 76 -8.1 -4.21812 | opp_overlap 2535228, overlap 2535232 TGGTTAAATCCACAC TGTTCAGAT GACC ATCTGAACG TTCTTTTGAATAAAA TERM 3002 2535232 - 2535251 + g 72 -9.4 -3.12605 | opp_overlap 2535228, overlap 2535231 GGTTAAATCCACACT GTTCAGAT GACC ATCTGAAC GTTCTTTTGAATAAA TERM 3003 2535500 - 2535520 + r 100 -6.8 -6.00814 | opp_overlap 2535500 GCCAAATTCAAAGAA GCCCGC AGCATTAAA GCGGGC TTTTTTTTGCTTATT TERM 3004 2535575 - 2535556 - R 95 -8.6 -5.51046 | opp_overlap 2535556 TAAACACATAAAAAA TCCCTGCA AACA TGCAGAGA TTTTAATCAAACTAA TERM 3005 2535556 - 2535575 + r 71 -6.4 -4.26076 | opp_overlap 2535556 TAAACACATAAAAAA TCCCTGCA AACA TGCAGAGA TTTTAATCAAACTAA ACIAD2576 2536284 - 2535595 - | putative tRNA hydroxylase pdxJ 2536987 - 2536262 - | pyridoxal phosphate biosynthetic protein PdxJ recO 2537711 - 2537001 - | DNA repair protein era 2538973 - 2537936 - | GTP-binding protein Era TERM 3006 2538437 - 2538473 + g 100 -9.6 -5.0916 | gap 1, opp_overlap 2538432 2538436 TTCTGCAAAATTCAT GAGCTTGGTACGCTCTT GAAT GAGAG-GTAACAAGCTC TTTTTATCTTCAAGC rnc 2539671 - 2538979 - | ribonuclease III, ds RNA TERM 3007 2539546 - 2539519 - GR 71 -7.8 -3.64259 | gap 1, opp_overlap 2539519, overlap 2539524 AATCATCCCCAACAA TGAATCGCCCAGA AAC TCTAGGCG-CTCA TAATTGTATTTATGG TERM 3008 2539542 - 2539524 - GR 81 -11 -2.71745 | opp_overlap 2539519, overlap 2539519 TCCCCAACAATGAAT CGCCCAGA AAC TCTAGGCG CTCATAATTGTATTT ACIAD2582 2540020 - 2539643 - | putative signal peptide lepB 2540872 - 2540045 - | leader peptidase (signal peptidase I), serine protease TERM 3009 2540841 - 2540828 - G 82 -2.4 -5.60689 | CCACACAATAAAAAA CAGT AGCGTG ACTG GAACGAGAATCAAAT lepA 2542708 - 2540891 - | GTP-binding protein LepA ACIAD2585 2543413 - 2542964 - | putative thioesterase TERM 3010 2543482 - 2543499 + r 100 -9.9 -4.81551 | opp_overlap 2543482 TTTTTTTATGAAAAA GCCACTT TTAA AAGTGGC TTTTTCATCTGAATA TERM 3011 2543499 - 2543482 - R 100 -9.9 -4.72272 | opp_overlap 2543482 TTTTTTTATGAAAAA GCCACTT TTAA AAGTGGC TTTTTCATCTGAATA ACIAD2586 2544925 - 2543522 - | putative serine protease TERM 3012 2544419 - 2544405 - G 75 -7.1 -4.36595 | TAGTCAAATCCAAAA GGCGA ACCAA TCGCC AAAACGGGCTGTCCG TERM 3013 2546459 - 2546475 + G 77 -10.9 -2.88861 | opp_overlap 2546458 2546455 ACTGGGATGAATTAC GTTCCAC CAT GTGGAAC TATGTGGGGATCGTA TERM 3014 2546729 - 2546712 - g 74 -4.8 -4.82333 | ACAACAACTCAAAAA GACGGT TTTAAC ACCGCC AAATTTTGAAGTTAA nadB 2545135 - 2546769 + | L-aspartate oxidase TERM 3015 2546808 - 2546774 - T 72 -9.5 -2.53015 | gap 1, opp_overlap 2546776 2546776 2546778 2546780, overlap 2546762 2546778 2546780 ATACGCTTTAACGGA TATACAGGCGCTG-TA TTTA TACCAGTGCCTGTATA TGCTCAAGCGCTTCC TERM 3016 2546776 - 2546806 + T 76 -9.9 -2.78715 | gap 1, opp_overlap 2546774 2546762 2546778 2546780, overlap 2546776 2546778 2546780 ACGCTTTAACGGATA TACAGGCGCTG-TA TTTA TACCAGTGCCTGTA TATGCTCAAGCGCTT tmk 2547398 - 2546790 - | thymidylate kinase ACIAD2589 2548481 - 2547408 - | putative periplasmic solute-binding protein pabC 2549289 - 2548474 - | 4-amino-4-deoxychorismate lyase TERM 3017 2548605 - 2548591 - G 73 -3.5 -5.00895 | TGCATTACAGAAAAA CAGGC TCTGT ACCTG CGATAATTCAGTCAA TERM 3018 2548805 - 2548827 + g 80 -6.2 -4.80853 | overlap 2548806 TCCAATGTTAAAGCC TCTGACCATC CTT GCTGGTCAGC TTCTTTTTTTAAGAT TERM 3019 2548806 - 2548826 + g 78 -9.7 -3.46885 | overlap 2548805 CCAATGTTAAAGCCT CTGACCATC CTT GCTGGTCAG CTTCTTTTTTTAAGA TERM 3020 2548892 - 2548907 + g 71 -4.7 -4.72272 | overlap 2548883 GCAAGTTTAGGCATA CACAG GCCTAA CTGTG TTTTTAATACACCAC TERM 3021 2550394 - 2550382 - g 71 -3.4 -5.00616 | opp_overlap 2550382 GGTGGCTGGAAAAAA GTTC AAAAA GAAC ATTTCAGCAATGGCG cysP 2549449 - 2550450 + | sulfate ABC transporter periplasmic substrate-binding protein ACIAD2592 2550477 - 2551082 + | putative esterase of the alpha/beta hydrolase fold TERM 3022 2551365 - 2551382 + GF 74 -4.9 -4.8143 | CCACAGCGCTAATTG CAGCATT GATT AATGTTG TTTTTGGATTATTGC cysT 2551163 - 2551996 + | sulfate ABC transporter membrane protein cysW 2551960 - 2552883 + | sulfate ABC transporter membrane protein TERM 3023 2553248 - 2553238 - g 75 -2.4 -5.37593 | GCTGAAATCAAAAAA CGTG TCA CTCG CCTACTCGATCTGGT cysA 2552893 - 2553954 + | sulfate permease A protein chromate resistance ABC transporter ATP-binding protein cbl 2554007 - 2554930 + | transcriptional regulator CysB-like protein TERM 3024 2554934 - 2554911 - T 74 -2.4 -5.46629 | AAGAGCTTAAAAAAA TTGCCTACCC TGAA GATTAAGCAA AACAATAAGCCATAA TERM 3025 2554947 - 2554977 + T 80 -9.3 -3.68506 | gap 1, opp_overlap 2554947 2554954, overlap 2554954 CAAAACAATAAGCCA TAAAAAA-CGGGAT TGAA ATCCCGTTTTTTTA TTTGGATGGATCTTA TERM 3026 2554976 - 2554947 - T 81 -10.9 -2.75297 | opp_overlap 2554947 2554954, overlap 2554954 CAAAACAATAAGCCA TAAAAAACGGGAT TGAA ATCCCGTTTTTTT ATTTGGATGGATCTT TERM 3027 2554969 - 2554954 - T 95 -9 -5.3236 | opp_overlap 2554954 2554947, overlap 2554947 ATAAGCCATAAAAAA CGGGAT TGAA ATCCCG TTTTTTTATTTGGAT TERM 3028 2554954 - 2554969 + T 100 -9 -5.96894 | opp_overlap 2554947 2554954, overlap 2554947 ATAAGCCATAAAAAA CGGGAT TGAA ATCCCG TTTTTTTATTTGGAT ACIAD2598 2555730 - 2554990 - | putative porin protein associated with imipenem resistance TERM 3029 2555796 - 2555816 + H 77 -5.5 -4.96501 | opp_overlap 2555795 2555796 TTCTTATCTGTAAAC TCATAGTAT TAG AAACTATGA TTTCTTTTTATACAA TERM 3030 2555896 - 2555914 + H 82 -9 -3.92869 | overlap 2555889 TTTTTAAATCATTTT TGATGATT TCA AATCATCA TTTCTAAATAACTGG dapD 2556037 - 2556858 + | 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase TERM 3031 2556893 - 2556920 + F 100 -9.2 -5.56263 | TTTAGTCGCTTCTCG TCTCTACGCTCA GTCA TGGTCGTAGAGA TTTTTGTTTTCTAAT ACIAD2600 2556924 - 2557661 + | putative radical activating enzyme ACIAD2601 2557671 - 2558360 + | hypothetical protein ACIAD2602 2558374 - 2558784 + | hypothetical protein TERM 3032 2558807 - 2558827 + F 85 -6.8 -5.252 | opp_overlap 2558807 2558810, overlap 2558810 TTGTAAATCACTAAA CCAGCCAC TTTAT GTGGCTTG TTTTTTATGGAGATA TERM 3033 2558810 - 2558824 + F 83 -7.1 -4.72201 | opp_overlap 2558810 2558807, overlap 2558807 TAAATCACTAAACCA GCCAC TTTAT GTGGC TTGTTTTTTATGGAG bcp 2558825 - 2559307 + | bacterioferritin comigratory protein TERM 3034 2559335 - 2559360 + T 71 -3.4 -5.11033 | TTTCTGAAAGAATCT GGACTTAT CTTTTTTCGA ATAAGTCC TTTTTTCAGATTATG ACIAD2604 2559949 - 2559371 - | hypothetical protein ACIAD2606 2560561 - 2559995 - | nicotinamide-nucleotide adenylyltransferase TERM 3035 2560592 - 2560608 + H 75 -7.3 -4.10161 | overlap 2560593 CCATGAACTCATCAG TTGCTCT TTT AGAGCAG TTTTAAGACATAATG TERM 3036 2560593 - 2560607 + H 71 -8.6 -3.05775 | overlap 2560592 CATGAACTCATCAGT TGCTCT TTT AGAGCA GTTTTAAGACATAAT TERM 3037 2560927 - 2560942 + G 72 -6.1 -4.34263 | opp_overlap 2560925 2560926 GTATGAAGGCAAAGC TGGCG ATCAGC CGCCA TTTGTATTATTAAAG ACIAD2607 2560661 - 2561461 + | putative enoyl-CoA hydratase/isomerase ACIAD2608 2561570 - 2562358 + | putative nitrorecductase ACIAD2609 2562704 - 2562360 - | hypothetical protein TERM 3038 2562432 - 2562453 + g 70 -2.9 -4.96848 | ATGGCTTGCCTTTAA TGCTTTTGC GACA GCACTAGCA TTTTTCTCTAAGACA ACIAD2610 2562785 - 2564002 + | MFS family transporter TERM 3039 2564223 - 2564200 - T 100 -14 -4.85433 | opp_overlap 2564200 2564204, overlap 2564204 ATATAAAGCTAAAAA TAAAGCCACC CGTT GGTGGCTTTA TTTCACTTATCTTAA TERM 3040 2564200 - 2564223 + T 100 -14 -3.85509 | opp_overlap 2564200 2564204, overlap 2564204 ATATAAAGCTAAAAA TAAAGCCACC CGTT GGTGGCTTTA TTTCACTTATCTTAA TERM 3041 2564204 - 2564219 + T 100 -10.4 -4.51765 | opp_overlap 2564200 2564204, overlap 2564200 AAAGCTAAAAATAAA GCCACC CGTT GGTGGC TTTATTTCACTTATC TERM 3042 2564219 - 2564204 - T 100 -10.4 -4.92828 | opp_overlap 2564204 2564200, overlap 2564200 AAAGCTAAAAATAAA GCCACC CGTT GGTGGC TTTATTTCACTTATC purL 2568075 - 2564239 - | phosphoribosylformylglycinamidine synthase TERM 3043 2567662 - 2567647 - G 73 -5.4 -4.59853 | opp_overlap 2567647 2567654 CGAAGTTTCCAAAAA CAATGC ATTG GCACTG TCAATTTCTGCAAAA TERM 3044 2568197 - 2568164 - H 76 -4.1 -5.0925 | gap 1 TGTGAAAAGCAAAAA TCAGCTAGATAA-ACA ATC TGTATTATCTAAATGA ATTGCATCAAAATAA TERM 3045 2568263 - 2568277 + H 76 -6.4 -4.59309 | ACGCCAACTTCTGTC GCACTG ATC TAGTGC TTTTGCATTTTTTTT dgt 2568330 - 2569664 + | deoxyguanosinetriphosphate triphosphohydrolase-like protein ruvA 2569766 - 2570380 + | holliday junction helicase subunit A ruvB 2570388 - 2571392 + | Holliday junction DNA helicase B ACIAD2616 2571470 - 2572105 + | hypothetical protein ACIAD2618 2572373 - 2572804 + | putative thioesterase TERM 3046 2572989 - 2572977 - g 79 -3.3 -5.28176 | overlap 2572978 CTGAGTTATAAAAAA TCTGC CCA GCAGG ATGAACATTTTCAAA TERM 3047 2572995 - 2573009 + G 70 -5.8 -4.34402 | opp_overlap 2572995 GCCCAGCAGGATGAA CATTTT CAA AAAATG TTTTGGTCTGGCGCA TERM 3048 2573281 - 2573293 + G 80 -6.3 -4.84642 | TTGGTACGGTATGGG GCATT ATG AATGC TTTTATTGGTTTAGC TERM 3049 2573361 - 2573380 + G 78 -7.2 -4.41616 | GGTATCGCGGAGGCC CTAATTGC AACA GCAATTGG TTTATTTGCCGCAAT tolQ 2572830 - 2573528 + | tolerance to group A colicins, single-stranded DNA filamentous phage, required for OM integrity tolR 2573528 - 2573974 + | tolerance to group A colicins, single-stranded DNA filamentous phage, required for OM integrity TERM 3050 2574301 - 2574274 - g 86 -9.8 -3.9712 | overlap 2574275 TCAGGCTACCACAAA TGCAGCTCTGGC AGCA GCCACAGCGGCA GCAGCAAAAACTGCT TERM 3051 2574315 - 2574275 - g 76 -10.3 -2.97951 | overlap 2574274 2574312 CAGGCTACCACAAAT GCAGCTCTGGCAGCAGCCA CAG CGGCAGCAGCAAAAACTGC TCAAATTGCAGATGC tolA 2573978 - 2575288 + | tolerance to group A colicins, single-stranded filamentous DNA phage, required for OM integrity TERM 3052 2575345 - 2575292 - f 77 -3.3 -5.46706 | ACTGCAAAATAAAAA TTTGCTCACGATTACATGCTTTACA TGGA TTCAAAGTATGTAATCGTGCTAAAA CAACACACGAGCAAC tolB 2575393 - 2576670 + | tolerance to colicins E2, E, A, and K, required for OM integrity pal 2576689 - 2577270 + | peptidoglycan-associated lipoprotein precursor TERM 3053 2577289 - 2577309 + F 100 -14.1 -5.28315 | opp_overlap 2577289 ATGATTTAATAAAAA GCGCCTTTA TCA TAAAGGCGC TTTTTTACATTTTAT TERM 3054 2577309 - 2577289 - f 100 -14.1 -5.11063 | opp_overlap 2577289 ATGATTTAATAAAAA GCGCCTTTA TCA TAAAGGCGC TTTTTTACATTTTAT TERM 3055 2578452 - 2578464 + G 78 -5.5 -5.06505 | ATTCACCGTATTTTA TGCCG TTC TGGCA TTTTTATGTATCCTT fbp 2577714 - 2578685 + | fructose-1,6-bisphosphatase TERM 3056 2578725 - 2578698 - f 100 -13.6 -3.92804 | gap 1, opp_overlap 2578715, overlap 2578690 TAATAAACCATCAAA CTGTGATGCC-GA CTC TCTGGCATCACAG TGGACGCCATTTATG TERM 3057 2579470 - 2579484 + G 70 -2.8 -5.07053 | TTAAACGTCGCAATT GCAGGT TCA ATTTGC TTTTTTGAAATGGTT ACIAD2626 2578714 - 2579514 + | putative tRNA/rRNA methyltransferase ACIAD2627 2579657 - 2580295 + | RNA polymerase factor sigma-70 ACIAD2628 2580282 - 2580602 + | hypothetical protein ACIAD2629 2580619 - 2580990 + | hypothetical protein TERM 3058 2580997 - 2581041 + T 76 -9.6 -2.95384 | opp_overlap 2580988 2580994 2581011, overlap 2580988 2581011 GATCAATAAAAGTTT TAATTTAAAAAAAAGAGGTC AATTG GACCTCTTTTTTTCGAATCA TCGTTTAAATCGTCT TERM 3059 2581027 - 2581011 - T 100 -8 -5.86332 | opp_overlap 2580997 2581011 TTAATTTAAAAAAAA GAGGTC AATTG GACCTC TTTTTTTCGAATCAT TERM 3060 2581011 - 2581027 + T 93 -8 -5.44721 | opp_overlap 2581011, overlap 2580997 TTAATTTAAAAAAAA GAGGTC AATTG GACCTC TTTTTTTCGAATCAT ACIAD2630 2583441 - 2581039 - | putative outer membrane protein A TERM 3061 2581510 - 2581528 + g 70 -3.9 -4.78149 | overlap 2581512 CGTGTACTCATCATT TGTAGCA ATAGG TGCTATA TTTTTAAATTGTGCA ACIAD2631 2585274 - 2583451 - | hypothetical protein TERM 3062 2583707 - 2583728 + g 71 -3 -5.00138 | opp_overlap 2583707 GGGGTATACACAACA TTACCCTC TTGGTC GAGCGTAA TTTTTCCTTTAGATG TERM 3063 2583919 - 2583897 - G 75 -2.1 -5.31275 | CTTGACCATAAAAAA TATCAGT TCCCACCAC ACTGATA GACGATGTATCAATC ACIAD2632 2586096 - 2585389 - | putative chromosomal replication initiator, DnaA-type ACIAD2633 2587307 - 2586117 - | PerM family permease TERM 3064 2586586 - 2586566 - G 70 -7.5 -3.88097 | CGAGATAAGGAATAA TGCTGGCGA GTC CCGCCACCA TCCCGATAATCAGGC purM 2587442 - 2588512 + | phosphoribosylaminoimidazole synthetase purN 2588509 - 2589138 + | phosphoribosylglycinamide formyltransferase 1 TERM 3065 2589196 - 2589151 - T 100 -17.2 -3.3039 | gap 1, opp_overlap 2589151 2589154 2589156 2589165, overlap 2589153 2589154 2589165 TAAAAATCAACCCAA TATGTCATAAAAAAGCGCGCC ATCCA GGCGCGCTTTTTTATGTC-TA TTTATGCTCGAATCA TERM 3066 2589151 - 2589196 + T 100 -17.2 -3.9712 | gap 1, opp_overlap 2589151 2589153 2589154 2589165, overlap 2589154 2589156 2589165 TAAAAATCAACCCAA TATGTCATAAAAAAGCGCGCC ATCCA GGCGCGCTTTTTTATGTC-TA TTTATGCTCGAATCA TERM 3067 2589195 - 2589153 - T 100 -17.9 -3.19808 | opp_overlap 2589151 2589154 2589156 2589165, overlap 2589151 2589154 2589165 AAAATCAACCCAATA TGTCATAAAAAAGCGCGCC ATCCA GGCGCGCTTTTTTATGTCT ATTTATGCTCGAATC TERM 3068 2589154 - 2589194 + T 100 -21.4 -3.57674 | opp_overlap 2589154 2589153 2589151 2589165, overlap 2589151 2589156 2589165 AAATCAACCCAATAT GTCATAAAAAAGCGCGCC ATCCA GGCGCGCTTTTTTATGTC TATTTATGCTCGAAT TERM 3069 2589194 - 2589154 - T 100 -21.4 -2.508 | opp_overlap 2589151 2589154 2589156 2589165, overlap 2589153 2589151 2589165 AAATCAACCCAATAT GTCATAAAAAAGCGCGCC ATCCA GGCGCGCTTTTTTATGTC TATTTATGCTCGAAT TERM 3070 2589156 - 2589192 + T 100 -22.6 -3.36228 | opp_overlap 2589154 2589153 2589151 2589165, overlap 2589154 2589151 2589165 ATCAACCCAATATGT CATAAAAAAGCGCGCC ATCCA GGCGCGCTTTTTTATG TCTATTTATGCTCGA TERM 3071 2589183 - 2589165 - T 100 -13.1 -5.26918 | opp_overlap 2589156 2589154 2589151 2589165, overlap 2589154 2589153 2589151 ATATGTCATAAAAAA GCGCGCC ATCCA GGCGCGC TTTTTTATGTCTATT TERM 3072 2589165 - 2589183 + T 100 -13.1 -5.46276 | opp_overlap 2589165 2589154 2589153 2589151, overlap 2589156 2589154 2589151 ATATGTCATAAAAAA GCGCGCC ATCCA GGCGCGC TTTTTTATGTCTATT ACIAD2636 2590001 - 2589198 - | putative hydrolase ACIAD2637 2591029 - 2590013 - | putative protease; putative signal peptide peptidase sppA TERM 3073 2590653 - 2590639 - G 74 -10 -3.14468 | opp_overlap 2590638 2590634 TTTCATCAGATTGAA CAGGTG ATC CACCTG GTGAATTAATATTCA comA 2594487 - 2592109 - | competence factor involved in DNA uptake ACIAD2638 2591163 - 2592176 + | putative lipid A biosynthesis lauroyl acyltransferase TERM 3074 2594603 - 2594568 - TR 76 -7.8 -3.99275 | opp_overlap 2594572, overlap 2594572 TTATATAATATTAAA TAGAGGATAAAGCTCT CGGA AAAACTTTATCCTTTA AATCAATTTACTAAG TERM 3075 2594599 - 2594572 - TR 75 -8.6 -3.35191 | opp_overlap 2594572, overlap 2594568 ATAATATTAAATAGA GGATAAAGCTCT CGGA AAAACTTTATCC TTTAAATCAATTTAC lolD 2595288 - 2594614 - | outer membrane lipoproteins ABC transporter ATP-binding protein lolC 2596528 - 2595293 - | outer membrane lipoproteins ABC transporter membrane protein TERM 3076 2596584 - 2596565 - R 79 -9.4 -3.39018 | overlap 2596563 2596580 TCATTATCGGAAATA CAGTATTG CACT CAATACTG CGATCAGCATCTAAC TERM 3077 2596652 - 2596619 - R 72 -6.1 -4.39568 | gap 1, opp_overlap 2596619, overlap 2596613 ATTGATACACCAAAA GAATCTGGGTTAACAC AGC GGGTTAAACC-GATTC TTTCTTATAATGACC TERM 3078 2596619 - 2596652 + r 72 -6.1 -4.35483 | gap 1, opp_overlap 2596613 2596619 ATTGATACACCAAAA GAATCTGGGTTAACAC AGC GGGTTAAACC-GATTC TTTCTTATAATGACC ACIAD2642 2596829 - 2596641 - | hypothetical protein ACIAD2643 2597769 - 2596837 - | hypothetical protein TERM 3079 2597710 - 2597658 - G 70 -5.6 -4.37886 | gap 1 CCATCGCCCATAAAA CATTTAGGTCAGATACACTCCAGAC AATT GCCAGGGGTGTAGATG-CCCAAATG AATACCAACACAATA ACIAD2644 2598233 - 2597766 - | hypothetical protein ACIAD2645 2598456 - 2599394 + | hypothetical protein TERM 3080 2599541 - 2599565 + T 83 -5 -5.45726 | overlap 2599545 2599545 TAGGTATGTTTTTAG CCGCGATGAT TATTC ATCATCTTGG TTTTTTTCCAGTCTA TERM 3081 2599626 - 2599599 - T 100 -12.2 -4.64766 | gap 1, opp_overlap 2599599 TGCACATGTCAAAAA GCCCTCAT-CAAT TAG ATTGGATGAGGGC TTTTTGCTGGAAAAT TERM 3082 2599599 - 2599626 + T 100 -12.2 -4.7254 | gap 1, opp_overlap 2599599 TGCACATGTCAAAAA GCCCTCAT-CAAT TAG ATTGGATGAGGGC TTTTTGCTGGAAAAT serC 2600720 - 2599641 - | phosphoserine aminotransferase TERM 3083 2600393 - 2600408 + g 80 -6.1 -4.83169 | TATCGCCATAGCGCT GCGCT TCTTTC AGCGC TTTTTCTGACCAAAT TERM 3084 2600640 - 2600660 + g 74 -4.7 -4.82901 | CCCCTTACCCTGCCA GTCCAACAA TTC TTGTTGAGC TTTTTCTAAAACAGC TERM 3085 2602014 - 2601992 - g 71 -4.8 -4.62783 | overlap 2601993 2602004 CACTGATTCGAAAAA TGCAAGTAGA TAC TCAACTTGCC GATGAGAATATTAAA ACIAD2648 2601067 - 2602527 + | putative outer membrane efflux protein ACIAD2649 2602541 - 2603671 + | putative membrane-fusion protein ACIAD2650 2603674 - 2604804 + | hypothetical protein TERM 3086 2605344 - 2605356 + G 78 -9.1 -3.8211 | AGCTATGTGTTTCCT GCGGT TGC ACCGC TTATTATCCATCAAA ACIAD2651 2604801 - 2605907 + | hypothetical protein TERM 3087 2605906 - 2605933 + T 82 -10 -3.58329 | opp_overlap 2605912, overlap 2605912 2605932 CTAAAAACCAAAAAT AAAAAAGGAAGC CGAA GCTTCCTTTTTA TTTGAAAAATATTTA TERM 3088 2605927 - 2605912 - T 100 -9 -5.95286 | opp_overlap 2605906 2605912 ACCAAAAATAAAAAA GGAAGC CGAA GCTTCC TTTTTATTTGAAAAA TERM 3089 2605912 - 2605927 + T 95 -9 -5.27335 | opp_overlap 2605912, overlap 2605906 ACCAAAAATAAAAAA GGAAGC CGAA GCTTCC TTTTTATTTGAAAAA gyrA 2608675 - 2605946 - | DNA gyrase, subunit A, type II topoisomerase ACIAD2653 2609503 - 2608976 - | hypothetical protein TERM 3090 2609598 - 2609546 - R 100 -13.5 -5.80817 | gap 1, opp_overlap 2609547 2609587 TTTAACATAAAAAAA GCGCTCCTGAGCAGAGCAGCAAAG CATGAC CTTAGCTACCC-GCGCAAGAGCGC TTTTAAACTTTAATT TERM 3091 2609587 - 2609598 + r 75 -7.2 -4.25676 | opp_overlap 2609546, overlap 2609547 TGACCTTAGCTACCC GCGC AAGA GCGC TTTTAAACTTTAATT etfA 2610556 - 2609621 - | electron transfer flavoprotein alpha-subunit etfB 2611323 - 2610574 - | electron transfer flavoprotein beta-subunit xerC 2612678 - 2611761 - | site-specific tyrosine recombinase ACIAD2658 2613326 - 2612685 - | hypothetical protein TERM 3092 2613396 - 2613376 - R 93 -6.9 -5.60993 | opp_overlap 2613376 TGCCCCATAAAAAAA GCACTATCC TAA AAATAGTGC TTTTAATGTATAGAT dapF 2614268 - 2613423 - | diaminopimelate epimerase lysA 2615522 - 2614272 - | diaminopimelate decarboxylase lppL 2615756 - 2615544 - | lipoprotein TERM 3093 2615870 - 2615852 - R 100 -14.6 -6.11644 | opp_overlap 2615852 TGATCTAAAAAAAAA CGCCAGTC ATC GACTGGCG TTTTTTCAATTATTT TERM 3094 2615852 - 2615870 + r 100 -14.6 -5.23016 | opp_overlap 2615852 TGATCTAAAAAAAAA CGCCAGTC ATC GACTGGCG TTTTTTCAATTATTT cycA 2617292 - 2615880 - | D-alanine/D-serine/glycine transport protein radA 2617574 - 2618953 + | DNA repair protein RadA ACIAD2665 2619224 - 2620246 + | hypothetical protein TERM 3095 2620298 - 2620254 - T 86 -10.2 -3.57246 | opp_overlap 2620266, overlap 2620256 2620265 2620266 2620269 AGGATTAATTAAAGA CATCATAAAAAGTAAGCCGC GATCA GCGGCTTATTTTTTATCAAG CAATTGCAGCAGGAA TERM 3096 2620296 - 2620256 - T 89 -11.4 -3.35539 | opp_overlap 2620266, overlap 2620254 2620265 2620266 2620269 GATTAATTAAAGACA TCATAAAAAGTAAGCCGC GATCA GCGGCTTATTTTTTATCA AGCAATTGCAGCAGG TERM 3097 2620287 - 2620265 - T 88 -7.7 -4.97666 | opp_overlap 2620266, overlap 2620256 2620254 2620266 2620269 AAGACATCATAAAAA GTAAGCCGC GATCA GCGGCTTAT TTTTTATCAAGCAAT TERM 3098 2620266 - 2620286 + T 100 -11.2 -5.24129 | opp_overlap 2620265 2620256 2620254 2620266 2620269 AGACATCATAAAAAG TAAGCCGC GATCA GCGGCTTA TTTTTTATCAAGCAA TERM 3099 2620286 - 2620266 - T 90 -11.2 -3.56973 | opp_overlap 2620266, overlap 2620265 2620256 2620254 2620269 AGACATCATAAAAAG TAAGCCGC GATCA GCGGCTTA TTTTTTATCAAGCAA TERM 3100 2620283 - 2620269 - T 79 -8.5 -3.89607 | opp_overlap 2620266, overlap 2620266 2620265 2620256 2620254 CATCATAAAAAGTAA GCCGC GATCA GCGGC TTATTTTTTATCAAG ACIAD2666 2621283 - 2620294 - | putative lysyl-tRNA synthetase (lysine--tRNA ligase)(PoxA) pdxB 2622347 - 2621280 - | erythronate-4-phosphate dehydrogenase ACIAD2668 2622791 - 2622456 - | hypothetical protein antA 2623093 - 2624508 + | anthranilate dioxygenase large subunit antB 2624511 - 2625002 + | anthranilate dioxygenase small subunit antC 2625014 - 2626045 + | anthranilate dioxygenase reductase TERM 3101 2626064 - 2626085 + F 86 -10.3 -3.60412 | CCATTTCCCTTGCAA TGTCATATC ATCA GATATGACA TTCTCTCTCACCTTG TERM 3102 2626460 - 2626484 + F 70 -2.1 -5.32565 | overlap 2626464 CAGGTTTAAAAATAG TATTCCAACTG CTT TAGTTGGTCTA TTTTTTGCTTAATTC TERM 3103 2626464 - 2626480 + F 70 -7.3 -3.71857 | overlap 2626460 TTTAAAAATAGTATT CCAACTG CTT TAGTTGG TCTATTTTTTGCTTA ACIAD2672 2626535 - 2627671 + | putative transcriptional regulator TERM 3104 2627898 - 2627875 - T 100 -11.2 -5.04082 | TAAACAATAATAAAA CCTATTTAGA ACGC TCTAAATAGG CAAAAGGAAGTCACT ACIAD2673 2628886 - 2627939 - | putative signal peptide TERM 3105 2628927 - 2628906 - R 100 -9.5 -5.41143 | opp_overlap 2628906 GATCCCCGAAAAAAA TCACGACCA TAAG TGATCGTGA TAATTGTAGTTATGC ACIAD2674 2629482 - 2628937 - | putative electron transfer flavoprotein ACIAD2675 2630743 - 2629502 - | putative oxygenase subunit protein ACIAD2676 2631646 - 2630795 - | short chain dehydrogenase ACIAD2677 2632899 - 2631616 - | putative dienelactone hydrolase TERM 3106 2632714 - 2632679 - GR 78 -7 -4.32177 | gap 1, opp_overlap 2632711 GTACGCCAGAACAAA TCTGGCACAATAACGGT ATA ACC-TTCTTCTGCCAGA AAATCTGCTTTGGCG ACIAD2678 2634144 - 2633143 - | putative transcriptional regulator TERM 3107 2634247 - 2634267 + r 79 -3.9 -5.5353 | overlap 2634250 AACCTCAATGTCCAA CACGACTTC AAC GCAGTCTTG TTTTTTGTTAGTATA TERM 3108 2634250 - 2634264 + r 70 -4.2 -4.82661 | overlap 2634247 CTCAATGTCCAACAC GACTTC AAC GCAGTC TTGTTTTTTGTTAGT gdh 2635672 - 2634401 - | glutamate dehydrogenase (NAD(P)+) oxidoreductase protein TERM 3109 2634480 - 2634499 + g 70 -2.8 -5.0133 | overlap 2634469 2634469 GCGGCTGTACGCATC GTACAAGA TTTT TCTTGGGC TTTTTTCCAGACATC ACIAD2681 2636167 - 2635901 - | hypothetical protein ACIAD2682 2636961 - 2636197 - | putative outer membrane lipoprotein ACIAD2683 2637923 - 2636964 - | hypothetical protein TERM 3110 2637529 - 2637552 + g 74 -4.6 -4.86226 | opp_overlap 2637529, overlap 2637545 TCTAACAGAATAGAA GGTTCCTGAA TGGT TTTAAGAACC TTATTTTTTTGATAT TERM 3111 2637545 - 2637555 + g 90 -4 -5.58454 | opp_overlap 2637529, overlap 2637529 GTTCCTGAATGGTTT TAAG AAC CTTA TTTTTTTGATATAAA ACIAD2684 2641785 - 2637964 - | hypothetical protein TERM 3112 2640619 - 2640635 + g 77 -10.9 -2.7728 | opp_overlap 2640617 2640616 ATGTAGATGAAACTC CTGAGCA ATC TGCTCAG TCATTGGACTTTCAA ACIAD2685 2643250 - 2641820 - | hypothetical protein TERM 3113 2642415 - 2642427 + gr 82 -4.9 -5.26316 | opp_overlap 2642411 2642415 GCACTGACAAATTGA TATTC AAT GAATA TTTTTTCTGGAATAA TERM 3114 2642463 - 2642477 + gr 72 -5.8 -4.27443 | AGCTGTATAAGTTGC TGATTT AGG AAATCA TTATTTTCATCATCA ACIAD2686 2644218 - 2643220 - | hypothetical protein TERM 3115 2644015 - 2644031 + gr 70 -7.3 -3.76373 | AATCCGCTCATCGCT TTGAGCA AGA TGCTCGA TTTCAGTCTTGGGAA ACIAD2687 2645990 - 2644182 - | hypothetical protein ACIAD2688 2646475 - 2646002 - | hypothetical protein TERM 3116 2646529 - 2646493 - R 100 -17.7 -3.63968 | opp_overlap 2646498 2646502, overlap 2646494 2646502 CTTCAAATTCTTAAA CTTAATAAAGCGCAATA ATG TATTGCGCTTTATTAAA TCCATCAAAACATGA TERM 3117 2646528 - 2646494 - R 100 -19 -2.7806 | opp_overlap 2646498 2646502, overlap 2646493 2646502 TTCAAATTCTTAAAC TTAATAAAGCGCAATA ATG TATTGCGCTTTATTAA ATCCATCAAAACATG TERM 3118 2646498 - 2646524 + r 100 -15.4 -3.07816 | opp_overlap 2646494 2646493 2646502, overlap 2646502 AATTCTTAAACTTAA TAAAGCGCAATA ATG TATTGCGCTTTA TTAAATCCATCAAAA TERM 3119 2646520 - 2646502 - R 100 -11.8 -4.29326 | opp_overlap 2646498 2646502, overlap 2646494 2646493 CTTAAACTTAATAAA GCGCAATA ATG TATTGCGC TTTATTAAATCCATC TERM 3120 2646502 - 2646520 + r 100 -11.8 -4.2123 | opp_overlap 2646502 2646494 2646493, overlap 2646498 CTTAAACTTAATAAA GCGCAATA ATG TATTGCGC TTTATTAAATCCATC ACIAD2689 2647048 - 2646545 - | hypothetical protein ACIAD2690 2648590 - 2647094 - | hypothetical protein TERM 3121 2647181 - 2647161 - G 82 -10.5 -3.57792 | opp_overlap 2647160, overlap 2647177 TCATCCAGCTGGAAA TGCGGTCTT AAG AAGACCACA GATTTGTAGTGACCA TERM 3122 2647440 - 2647459 + g 78 -2.2 -5.55698 | gap 1, overlap 2647441 AATGCCGAATTGGCA T-TGGCAGT ATC ACTGTCATA TTTTTTTGGCTTCTG TERM 3123 2647441 - 2647457 + g 75 -7.3 -4.40173 | overlap 2647440 ATGCCGAATTGGCAT TGGCAGT ATC ACTGTCA TATTTTTTTGGCTTC ACIAD2691 2649077 - 2648568 - | hypothetical protein ACIAD2693 2649747 - 2649091 - | hypothetical protein TERM 3124 2651616 - 2651601 - g 70 -7.6 -3.6279 | AAACGCTGGCAACAA GAACGA GAGC TCGTTC AAAAAATTCAAAATA TERM 3125 2651636 - 2651623 - g 73 -3.9 -5.00884 | AGCTCGTTCAAAAAA TTCAA AATA TTGAA ATAAATACAGATGCT ACIAD2694 2650125 - 2652809 + | putative ClpA/B-type chaperone ACIAD2695 2652825 - 2653928 + | hypothetical protein ACIAD2696 2653945 - 2655312 + | hypothetical protein TERM 3126 2655391 - 2655372 - g 70 -7.8 -3.67634 | overlap 2655370 GATGATGGCAAAATA GGTGGAGA TTTT TCTCCCCC AAATACTCAAAATGT TERM 3127 2655420 - 2655404 - g 72 -6.5 -4.323 | opp_overlap 2655403 2655410 CCCAAATACTCAAAA TGTCAGC CAG GCTGTCA ATCTGGTCGATTTAT TERM 3128 2655770 - 2655785 + G 76 -7.6 -4.17355 | opp_overlap 2655751 AGGCAAAGAGCGTCT GACTTC ACTC GAAGTC TTTCATTATTGTTTA ACIAD2697 2655324 - 2656127 + | hypothetical protein ACIAD2698 2656138 - 2656719 + | hypothetical protein ACIAD2699 2656820 - 2657683 + | hypothetical protein ACIAD2700 2658882 - 2657701 - | hypothetical protein TERM 3129 2659301 - 2659322 + H 95 -4.5 -6.32216 | AGGCAGATCGCGCTG GGATTGTTT CCCT AAAAAATCC TTTTTTTTTGTATAT ACIAD2701 2659669 - 2660025 + | hypothetical protein ACIAD2702 2660030 - 2660530 + | hypothetical protein TERM 3130 2660563 - 2660528 - f 100 -11.4 -5.35815 | opp_overlap 2660526 2660531 2660537 TATAGGAAAGAAAAA TAATAAAAGGACTGGA TTAA TCCAGCCTTTTTATTA TATCAATTTATGACT TERM 3131 2660531 - 2660560 + F 77 -8.7 -3.58869 | opp_overlap 2660528, overlap 2660526 2660537 AGGAAAGAAAAATAA TAAAAGGACTGGA TTAA TCCAGCCTTTTTA TTATATCAATTTATG TERM 3132 2660537 - 2660554 + F 82 -5.5 -5.24796 | opp_overlap 2660528, overlap 2660531 2660526 GAAAAATAATAAAAG GACTGGA TTAA TCCAGCC TTTTTATTATATCAA ACIAD2704 2660893 - 2661510 + | hypothetical protein ACIAD2705 2661512 - 2661904 + | hypothetical protein TERM 3133 2661914 - 2661938 + F 93 -10.1 -4.18018 | opp_overlap 2661914 TATTAATTAGCAAAA TATCCCATCAT TAC AAGATGGGATA TTTTCAATCAAAAAA TERM 3134 2661938 - 2661914 - f 100 -10.1 -4.36411 | opp_overlap 2661914 TATTAATTAGCAAAA TATCCCATCAT TAC AAGATGGGATA TTTTCAATCAAAAAA ACIAD2707 2662166 - 2662330 + | hypothetical protein TERM 3135 2662343 - 2662306 - f 72 -8.1 -3.36823 | gap 1, opp_overlap 2662313, overlap 2662301 TTCCTTAAAACTCAA TATAAAAGATGGCTTTAT AAC AT-AAGTCATCTTTTATA CAAAGGATAATCACT TERM 3136 2662839 - 2662864 + G 71 -4.1 -4.77165 | opp_overlap 2662840, overlap 2662831 TCTTTAGGAAAAGAA TTTTCTATAGT AAAA ACTAAAGGAAA TTTTATTATAAAGAA TERM 3137 2662969 - 2662950 - g 76 -2.8 -5.30448 | opp_overlap 2662952, overlap 2662952 AAAGAAATAGAAAAA TATGGAAG ATTA CCTCCATT TCCAATTTTCATTAT ACIAD2708 2662359 - 2663201 + | hypothetical protein ACIAD2709 2663226 - 2663423 + | hypothetical protein ACIAD2710 2663420 - 2663560 + | hypothetical protein ACIAD2711 2663658 - 2664314 + | hypothetical protein ACIAD2712 2664311 - 2664601 + | hypothetical protein ACIAD2713 2664856 - 2665167 + | hypothetical protein ACIAD2714 2665176 - 2665442 + | hypothetical protein TERM 3138 2665656 - 2665668 + G 95 -4.9 -5.76949 | opp_overlap 2665656 TGGAAATTAAAATAT CTAAT ACC ATTAG TTTTTTTTGGAACTA TERM 3139 2665805 - 2665824 + G 81 -4.2 -5.39221 | overlap 2665807 TTATCATTAGCTTGT GGTGCTGC AGGA GTAGCAAC TTTTTTACTTGTTCT ACIAD2715 2665640 - 2665873 + | hypothetical protein ACIAD2716 2666177 - 2666626 + | hypothetical protein TERM 3140 2666745 - 2666699 - T 84 -8.3 -4.62302 | gap 1, opp_overlap 2666706 2666709, overlap 2666709 CAACATTTCTAAAAA TCTTAAATTA-GTCCTCACCTA AAAA TAAGTGAGGACTTCATTTATGA TCAAAAGTATTAACA TERM 3141 2666709 - 2666734 + T 86 -10.5 -3.63228 | opp_overlap 2666699 2666709, overlap 2666706 AAAAATCTTAAATTA GTCCTCACCTA AAAA TAAGTGAGGAC TTCATTTATGATCAA TERM 3142 2666734 - 2666709 - T 87 -12.7 -2.97543 | opp_overlap 2666709 2666706, overlap 2666699 AAAAATCTTAAATTA GTCCTCACCTA AAAA TAAGTGAGGAC TTCATTTATGATCAA TERM 3143 2666840 - 2666825 - T 71 -7.6 -3.64066 | overlap 2666823 AGTTAAATAATAATA CTTGGT GGCA ACCAAG AAATAGTGGTAAAGT TERM 3144 2666891 - 2666855 - T 75 -9.6 -2.77029 | opp_overlap 2666855, overlap 2666854 GAAATAGTGGTAAAG TTTTGGTGCTTCATGA TTTAT TCAAGAAGCACAAAAA TTAGGTTATTCTTTA TERM 3145 2666855 - 2666891 + T 81 -9.6 -3.35237 | opp_overlap 2666855 2666854 GAAATAGTGGTAAAG TTTTGGTGCTTCATGA TTTAT TCAAGAAGCACAAAAA TTAGGTTATTCTTTA ACIAD2717 2667374 - 2667252 - | hypothetical protein ACIAD2718 2667817 - 2667470 - | fragment of umuC ACIAD2720 2668097 - 2667885 - | hypothetical protein TERM 3146 2668317 - 2668370 + r 77 -10 -3.09562 | gap 1, opp_overlap 2668333 2668335, overlap 2668315 2668321 2668329 TAACTAAAAAGTTTC TTAACTATATCGCAAACATTCAGCT TATTT AGCTGAA-GTTGGTTATATAGTTAA TAATTTCATTCTTTT ACIAD2721 2669565 - 2668408 - | putative hydrolase/monooxygenase ACIAD2722 2669835 - 2669590 - | putative multidrug resistance efflux pump TERM 3147 2669822 - 2669789 - G 71 -9.7 -2.62983 | opp_overlap 2669787, overlap 2669794 GCCACGTTTAGATTA GTTAAGGCTATCTGT CGAA ACATATAGCCTTGAC CCTCTAGTAACATTT ACIAD2723 2670441 - 2669836 - | putative hydrolase ACIAD2724 2671197 - 2670466 - | putative pirin-like protein ACIAD2725 2672282 - 2671209 - | putative oxidoreductase, NADH-dependent flavin oxidoreductase TERM 3148 2672143 - 2672168 + g 81 -11.3 -2.75891 | gap 1, overlap 2672141 ATTAATCCCACACTT GCACGCTGAGTA TAA TACTCAGC-TGC TAATTCGCTAGGTGT ACIAD2727 2672578 - 2673465 + | putative transcriptional regulator ACIAD2728 2673935 - 2673741 - | fragment of umuC umuD 2674522 - 2673896 - | component of DNA polymerase V TERM 3149 2673969 - 2673983 + gH 72 -5 -4.67635 | opp_overlap 2673969, overlap 2673971 2673973 TCATCGATATAAATA TTCTGA AAA TCAGGA TTTTCTGCTTTTAAC TERM 3150 2674035 - 2674020 - GH 72 -6.2 -4.26076 | TTAGGCGGATGAAAA TGATGA TCGA TCATCA GACGTTTTACCGTAA ACIAD2730 2674591 - 2674896 + | hypothetical protein ACIAD2731 2675543 - 2675103 - | hypothetical protein TERM 3151 2675967 - 2675945 - R 100 -13.6 -5.35224 | TCCACAAAAATAAAA GCCATTACAT CAA ATGTAATGGC TCGAACACATTGGAA ACIAD2734 2676648 - 2675995 - | hypothetical protein TERM 3152 2676177 - 2676161 - G 80 -8.7 -3.92659 | TGCTGAAAAGCCAAA CGACAGC TTA ACTGTCG ACTCCAGTCTGCTGC pqiB 2678377 - 2676704 - | paraquat-inducible protein pqiA-2 2679194 - 2678403 - | paraquat-inducible protein A (part 2) pqiA-1 2679877 - 2679182 - | paraquat-inducible protein A (part 1) TERM 3153 2680225 - 2680207 - R 70 -3.8 -5.00616 | TTCTTTTTTAAAAAA TTCATGGC GAT GCCCTAAA ACTAGATCAGTTTAG TERM 3154 2680354 - 2680324 - R 100 -10.6 -5.34555 | overlap 2680305 TTATACTATAAAAAA TCATCGGAAATG GTGATTT CACTTCCGATGA TCAAGAGAGTTTAAA ACIAD2738 2681362 - 2680379 - | putative NADPH:quinone reductase and related Zn-dependent oxidoreductase TERM 3155 2680486 - 2680468 - G 74 -6.6 -4.25074 | GATCAAATCTTAAAA CAGCCTCC ACA GGGAGCTG TAACTGGTGGGTCGC ACIAD2739 2682087 - 2681407 - | hypothetical protein ACIAD2740 2682713 - 2682084 - | TetR/AcrR family transcriptional regulator TERM 3156 2682741 - 2682727 - R 70 -4.3 -4.74504 | opp_overlap 2682727 ATTGCAATTTAAAAA TAGAC CAGTC GTCTA TTATTATAGTGAAGT TERM 3157 2682913 - 2682891 - R 95 -6.4 -5.80951 | opp_overlap 2682884 2682891, overlap 2682879 ATTTAAAACAAAAAA GTGAAACA TGTTTTT TGTTTCAC TTTGGATTTTTATTT ACIAD2741 2684903 - 2683035 - | hypothetical protein ACIAD2742 2686036 - 2685080 - | putative transcriptional regulator TERM 3158 2685726 - 2685708 - G 70 -5.3 -4.56607 | GGATGAATCATAAAA TGCCCAA CCGCT TTAGGCA CACTCATCCGCACGG ACIAD2743 2686126 - 2686767 + | putative amino acid efflux transmembrane protein ACIAD2745 2686895 - 2687617 + | putative signal peptide ACIAD2746 2688538 - 2687693 - | hypothetical protein TERM 3159 2688044 - 2688032 - G 86 -7.7 -4.65895 | opp_overlap 2688031 TGCCCGATGTAAAAA TGGCA ACA TGCCA AGTTCTAAACTGGCT TERM 3160 2688733 - 2688716 - R 86 -4.8 -5.60993 | opp_overlap 2688716 CGTTTCACAAAAAAA CCTGCC ACTTAG AGCAGG TTGATGAGATTGAAA ACIAD2748 2689656 - 2688787 - | putative peroxidase/hydrolase TERM 3161 2689166 - 2689145 - G 71 -4.5 -4.64766 | opp_overlap 2689145, overlap 2689161 CTGACACCGTAAAAA TCTTTAAAG AAAT CATTAAAGA ATTTAGGGCGTTCAT ACIAD2749 2690008 - 2690187 + | hypothetical protein ACIAD2750 2690371 - 2690171 - | hypothetical protein TERM 3162 2690228 - 2690260 + g 72 -7.8 -3.86935 | TAAAATTCGTTTGCG CTCCTGAATTTCAA TTTCT TCGACATTCAGGAG TTGTTCTAATGCTTG TERM 3163 2690495 - 2690512 + r 85 -8.5 -4.2018 | CATGAGATGGCTTGT TGTACGT TTTG ACGTACA TTGTTTTAAGGATTT TERM 3164 2690663 - 2690701 + r 89 -13.4 -2.51312 | opp_overlap 2690673, overlap 2690673 TACCTAGCAATGAAA TACGAAAAAAGCCCAACA GGA TGTTGGGCTTTTTTTATG CTTGATGAGTAACTT TERM 3165 2690691 - 2690673 - R 100 -13.2 -5.32699 | opp_overlap 2690663 2690673 TGAAATACGAAAAAA GCCCAACA GGA TGTTGGGC TTTTTTTATGCTTGA TERM 3166 2690673 - 2690691 + r 100 -13.2 -5.71983 | opp_overlap 2690673, overlap 2690663 TGAAATACGAAAAAA GCCCAACA GGA TGTTGGGC TTTTTTTATGCTTGA TERM 3167 2690766 - 2690749 - R 89 -7.7 -5.28176 | opp_overlap 2690749 TTTAGGCATAAAAAA TCCCGTC GGAT GACAGGA ATTTTCAAACCAGCG ACIAD2751 2690949 - 2690806 - | hypothetical protein TERM 3168 2690918 - 2690928 + g 76 -6.8 -4.56775 | opp_overlap 2690918 2690917 ACACAAAAATAGAAG CCTG TTC CAGG TTTTTCGCCAGCAGT TERM 3169 2691060 - 2691077 + r 85 -8.5 -4.2018 | overlap 2691047 2691051 AGCGAAGTGCAGCTT TGTACGT TTTG ACGTACA TTGTTTTAGGGATTT TERM 3170 2691153 - 2691139 - R 71 -8.6 -2.98088 | overlap 2691148 TTCTAAAGTCATACA GGAACA GGA TGTTCC GAAACATAAAACAAC TERM 3171 2691238 - 2691256 + r 100 -7.4 -6.10295 | opp_overlap 2691238 2691239, overlap 2691239 CGAAATACGAAAAAA GCCCAACA GGA TGTTGGGG TTTTTTTTATATTAA TERM 3172 2691256 - 2691238 - R 89 -7.4 -5.32699 | opp_overlap 2691238 2691239, overlap 2691239 CGAAATACGAAAAAA GCCCAACA GGA TGTTGGGG TTTTTTTTATATTAA TERM 3173 2691255 - 2691239 - R 90 -10.9 -3.77993 | opp_overlap 2691238 2691239, overlap 2691238 GAAATACGAAAAAAG CCCAACA GGA TGTTGGG GTTTTTTTTATATTA TERM 3174 2691239 - 2691255 + r 100 -10.9 -4.23737 | opp_overlap 2691239 2691238, overlap 2691238 GAAATACGAAAAAAG CCCAACA GGA TGTTGGG GTTTTTTTTATATTA TERM 3175 2691280 - 2691293 + r 70 -3.9 -4.96501 | opp_overlap 2691280, overlap 2691287 ATATTAATTACAGTA GATTT TATA AAATC TTTATTTTTCTACAA ACIAD2752 2691774 - 2691295 - | hypothetical protein TERM 3176 2692132 - 2692160 + r 83 -8.2 -4.41309 | opp_overlap 2692137, overlap 2692137 AGCAAGCCAATAAGA AAAAAGCCCGAC TTAAT GTTGGGCTTTTC TTTATATTCTTATTT TERM 3177 2692155 - 2692137 - R 88 -5.9 -5.64873 | opp_overlap 2692132 2692137 GCCAATAAGAAAAAA GCCCGAC TTAAT GTTGGGC TTTTCTTTATATTCT TERM 3178 2692137 - 2692155 + r 90 -8.1 -5.11389 | opp_overlap 2692137, overlap 2692132 GCCAATAAGAAAAAA GCCCGAC TTAAT GTTGGGC TTTTCTTTATATTCT ACIAD2753 2693006 - 2692170 - | hypothetical protein ACIAD2754 2693314 - 2693036 - | hypothetical protein TERM 3179 2693295 - 2693274 - G 82 -3 -5.45652 | gap 1, opp_overlap 2693276, overlap 2693276 ATTCTCAATAAAAAA GACCCCATC ATCAA GATAGGG-C TATTTTGAATAATTT TERM 3180 2693294 - 2693276 - G 74 -6.7 -4.36592 | opp_overlap 2693276, overlap 2693274 TCTCAATAAAAAAGA CCCCATC ATCAA GATAGGG CTATTTTGAATAATT acnA 2695966 - 2693333 - | aconitate hydratase TERM 3181 2694907 - 2694897 - G 71 -4.6 -4.61873 | overlap 2694901 GTGGATAAATCAAAA CGCA GTA CGCG CGGGTACTCGGCTTG prpC 2697123 - 2695966 - | methylcitrate synthase TERM 3182 2697161 - 2697181 + r 72 -6.1 -4.38637 | overlap 2697162 CTGAATTTATTTATT AGGTACGAT GGA GTCGTACCA TTTTCACTTCTTATT TERM 3183 2697162 - 2697180 + r 79 -9.6 -3.21556 | overlap 2697161 TGAATTTATTTATTA GGTACGAT GGA GTCGTACC ATTTTCACTTCTTAT TERM 3184 2697294 - 2697311 + r 70 -7 -3.75845 | TCCATGCCGCCCTCA CGATGG CCAAGA CCATCG TTTCCGCTTATTTTC prpB 2698224 - 2697340 - | 2-methylisocitrate lyase ACIAD2759 2698994 - 2698248 - | GntR family transcriptional regulator ACIAD2760 2699198 - 2699338 + | fragment of putative transposase ACIAD2761 2700823 - 2699483 - | putative multidrug resistance pump ACIAD2762 2702014 - 2700863 - | siderophore-interacting protein TERM 3185 2701191 - 2701174 - G 70 -5.5 -4.4874 | overlap 2701175 TCCAAAAATCTAAAA TTCCAGC TAAA GCTGGAT AAGCTGTTTCATCTG TERM 3186 2701190 - 2701175 - G 71 -9 -3.28159 | overlap 2701174 CCAAAAATCTAAAAT TCCAGC TAAA GCTGGA TAAGCTGTTTCATCT ACIAD2763 2703264 - 2702041 - | MFS family transporter ACIAD2764 2705447 - 2703300 - | putative ferric siderophore receptor protein TERM 3187 2705062 - 2705074 + g 70 -7.7 -3.70902 | AATAGTCCATTCCAA GCCAT TTC ATGGC TTTGAGTATAGAAAC ACIAD2765 2705698 - 2706438 + | putative thioesterase entD 2706463 - 2707290 + | phosphopantetheinyl transferase component of siderophore synthetase TERM 3188 2707432 - 2707421 - T 89 -3 -5.80364 | opp_overlap 2707421, overlap 2707427 ATTCCAACAAAAAAA TCAA AATA TTGA AAATACTATTTTGAT ACIAD2767 2708080 - 2707493 - | putative siderophore biosynthesis protein; putative acetyltransferase TERM 3189 2708173 - 2708149 - R 84 -8 -4.56133 | overlap 2708143 TTTTAAGAATTAAAA GGATACTTTT TAATG AAAAGCATCC CAAGTAACTAACTAA ACIAD2768 2709345 - 2708185 - | putative ornithine decarboxylase ACIAD2769 2710695 - 2709355 - | putative siderophore biosynthesis protein; putative lysine/ornithine N-monooxygenase TERM 3190 2710486 - 2710475 - G 78 -4.4 -5.10077 | AAATAGTTCAAAAAA GAGT AGTG ACTC TTCGGATCTGCAAAA TERM 3191 2710514 - 2710502 - G 76 -7.7 -4.11216 | TTCGGATCTGCAAAA CTGAC AAG GTCAG CTATAAATGGAATTT entE 2712328 - 2710709 - | 2,3-dihydroxybenzoate-AMP ligase TERM 3192 2711939 - 2711963 + g 75 -7.1 -4.37711 | opp_overlap 2711937, overlap 2711942 TAATTTGATAAACCC TACTGCACGAC TTT GCCGTGCAATA TTTTCAATTTCATAA ACIAD2771 2715541 - 2712341 - | non-ribosomal peptide synthase ACIAD2772 2718802 - 2715557 - | non-ribosomal peptide synthase TERM 3193 2716362 - 2716346 - G 70 -8.1 -3.68222 | TGGTAAGGTTAACAA CACAAAA TCC TTTTGTG TCAACTTGCCATCCA TERM 3194 2718558 - 2718579 + g 71 -6.7 -4.18197 | CGAAAATCATAAATT TTGAGTTGA TTCG TCAATTCAA TTTTGGGTACAACAT ACIAD2773 2721297 - 2718805 - | non-ribosomal peptide synthase entA 2722098 - 2721313 - | 2,3-dihydroxybenzoate-2,3-dehydrogenase entB 2722755 - 2722126 - | 2,3-dihydro-2,3-dihydroxybenzoate synthetase, isochorismatase entC 2724036 - 2722849 - | isochorismate synthetase ACIAD2778 2725713 - 2724769 - | AraC family transcriptional regulator ACIAD2779 2726675 - 2726460 - | fragment of transposase's ORF2 ACIAD2780 2726926 - 2726672 - | fragment of transposase's ORF2 ACIAD2781 2727184 - 2726933 - | fragment of transposase's ORF2 ACIAD2782 2727537 - 2727343 - | fragment of transposase's ORF1 ACIAD2783 2729189 - 2727816 - | hypothetical protein TERM 3195 2729141 - 2729125 - G 82 -3 -5.42862 | ATACGCTTAAAAAAA TTCTCG GGATT CGAAAA ATTTTGACAAGTATA ACIAD2784 2735204 - 2729202 - | putative hemagglutinin protein (FhaB) TERM 3196 2733678 - 2733707 + g 74 -10.3 -2.63637 | opp_overlap 2733685, overlap 2733677 2733685 ATCCAGGGTTGTGCC TTGTAAAGTAATA TTGC TATTACTTTGCAA ATTCATATTGCCTTT ACIAD2785 2737063 - 2735297 - | putative hemolysin activator protein (FhaC) TERM 3197 2737381 - 2737366 - R 100 -10.4 -5.11881 | opp_overlap 2737365 2737364 AAACAAAAAAAATAA GGGAGC CAAA GCTCCC AATTTACTTTTGGCT TERM 3198 2737861 - 2737888 + r 75 -10 -2.76162 | opp_overlap 2737860 2737866, overlap 2737860 2737866 TGCATACGAACAAGG TAAAAGTCGCTG AATT CAGCCACTTTTA ATTTAGACTAGAATC TERM 3199 2737866 - 2737883 + r 71 -5.5 -4.55798 | opp_overlap 2737866 2737860, overlap 2737861 2737860 ACGAACAAGGTAAAA GTCGCTG AATT CAGCCAC TTTTAATTTAGACTA ACIAD2788 2739158 - 2737896 - | putative transport of long-chain fatty acids TERM 3200 2739043 - 2739023 - G 71 -9.9 -2.57564 | opp_overlap 2739020, overlap 2739022 TCATTTCCGCATAAT TTCCATTTT CTA AAAATGGAA GTATCGATTGCCCTG ACIAD2789 2740057 - 2739326 - | hypothetical protein ACIAD2790 2741375 - 2740002 - | putative oxidoreductase TERM 3201 2741210 - 2741221 + gr 70 -5.8 -4.26589 | opp_overlap 2741209 ATACAACAACAGATG CCGA AGAA TCGG TTTTGCGTATATGGT TERM 3202 2741544 - 2741602 + r 73 -7.29999 -3.97585 | gap 2, opp_overlap 2741547 2741556 2741559 2741589, overlap 2741556 2741559 AACCAGAATAGGTAC -ATATTGT-AATAATAATTACACAGTGTC AAT GACGCTGTGTAATTATTATTCAAAATAAA TTATTCCTTTCTTAT TERM 3203 2741596 - 2741547 - R 100 -17.7 -2.95894 | gap 1, opp_overlap 2741544 2741556 2741559, overlap 2741556 2741559 2741589 CAGAATAGGTACATA TTGTAATAATAATTACACAGTGTC AAT GACGCTGTGTAATTATTATT-CAA AATAAATTATTCCTT TERM 3204 2741588 - 2741556 - R 100 -15.1 -3.67558 | opp_overlap 2741544 2741556 2741559, overlap 2741547 2741559 TACATATTGTAATAA TAATTACACAGTGTC AAT GACGCTGTGTAATTA TTATTCAAAATAAAT TERM 3205 2741556 - 2741588 + r 100 -17.3 -3.63694 | opp_overlap 2741556 2741547 2741559, overlap 2741544 2741559 TACATATTGTAATAA TAATTACACAGTGTC AAT GACGCTGTGTAATTA TTATTCAAAATAAAT TERM 3206 2741585 - 2741559 - R 100 -12.4 -3.96469 | opp_overlap 2741556 2741544 2741559, overlap 2741556 2741547 ATATTGTAATAATAA TTACACAGTGTC AAT GACGCTGTGTAA TTATTATTCAAAATA TERM 3207 2741559 - 2741585 + r 100 -14.6 -3.95324 | opp_overlap 2741559 2741556 2741547, overlap 2741556 2741544 ATATTGTAATAATAA TTACACAGTGTC AAT GACGCTGTGTAA TTATTATTCAAAATA TERM 3208 2741728 - 2741702 - R 81 -11 -2.88663 | opp_overlap 2741701 2741706, overlap 2741706 ACTGATTTCTAGATA GTAAGGGAGT GTTCATG ACTCCCTTAC ATGAATTTTTATAGT ACIAD2793 2742349 - 2741744 - | putative transcriptional regulator TERM 3209 2743135 - 2743103 - g 81 -7.2 -4.74539 | gap 1, opp_overlap 2743104 2743106 AACAATCCAAGAAAA TGATATCTCTAAGCA TATC TGCTTTG-GATATCA TGTAAATCAAGCTGA ACIAD2794 2742813 - 2744345 + | monooxygenase TERM 3210 2744845 - 2744816 - g 100 -12.3 -5.80817 | opp_overlap 2744839, overlap 2744839 2744842 CTCAAGACAAAAAAA TTGCTGCTGTCAT TTCC ATGACACCAGCAA CAGATGGTCTTGCTG ACIAD2795 2744428 - 2745342 + | hypothetical protein ACIAD2796 2745343 - 2745522 + | hypothetical protein ACIAD2797 2745532 - 2745624 + | hypothetical protein TERM 3211 2745680 - 2745651 - T 70 -7.3 -3.76835 | opp_overlap 2745653 2745657, overlap 2745653 2745657 TTTAATAATATACAA GATAAAGGGAACT AATA AATTCCCTTTATT ATTCAATTCAAAGCC TERM 3212 2745678 - 2745653 - T 81 -9.9 -3.45756 | opp_overlap 2745653 2745657, overlap 2745651 2745657 TAATAATATACAAGA TAAAGGGAACT AATA AATTCCCTTTA TTATTCAATTCAAAG TERM 3213 2745653 - 2745678 + T 73 -7.7 -3.73068 | opp_overlap 2745653 2745651 2745657, overlap 2745657 TAATAATATACAAGA TAAAGGGAACT AATA AATTCCCTTTA TTATTCAATTCAAAG TERM 3214 2745674 - 2745657 - T 74 -6.3 -4.33674 | opp_overlap 2745653 2745657, overlap 2745653 2745651 AATATACAAGATAAA GGGAACT AATA AATTCCC TTTATTATTCAATTC ACIAD2799 2746221 - 2745769 - | hypothetical protein ACIAD2800 2746494 - 2746270 - | hypothetical protein TERM 3215 2746582 - 2746564 - R 85 -6.7 -5.26918 | ATAGGGCATAAAAAA CCGCATC GATCT GATGCAG CAGTGGCTTAGGCTA ACIAD2801 2747488 - 2746604 - | hypothetical protein ACIAD2802 2748146 - 2747694 - | hypothetical protein ACIAD2803 2748305 - 2748156 - | hypothetical protein ACIAD2804 2748677 - 2748378 - | hypothetical protein TERM 3216 2748785 - 2748814 + r 84 -5.2 -5.53079 | opp_overlap 2748784, overlap 2748786 TTTTATACAACTTAT AGTGATTAATTA CACAAA TAATTAATCACC TTTTTTATCTATTTT TERM 3217 2748786 - 2748813 + r 79 -8.7 -3.88187 | opp_overlap 2748784, overlap 2748785 TTTATACAACTTATA GTGATTAATTA CACAAA TAATTAATCAC CTTTTTTATCTATTT ACIAD2805 2749154 - 2748879 - | hypothetical protein ACIAD2806 2749446 - 2749135 - | hypothetical protein TERM 3218 2749254 - 2749241 - G 71 -6.7 -4.15061 | opp_overlap 2749236 2749241 GAATTGATATATAAA TGCTC TTCT GAGCA TGTACTTAATATTTC ACIAD2807 2749832 - 2749479 - | hypothetical protein TERM 3219 2750018 - 2750043 + H 71 -8.5 -2.96692 | opp_overlap 2750017 2750020, overlap 2750020 ACCGTTTCCTAAGAG CACTAAAAAAT CTCA ATTTTTTGGTG TGTATCCTCGTGCTC TERM 3220 2750349 - 2750369 + G 76 -11.1 -2.60065 | overlap 2750348 2750346 TGTGCGTATGGTTGT GTGGCTGTG ATT CTCAGCCAC CTGTATTTGTCGACT ACIAD2808 2750276 - 2750638 + | hypothetical protein TERM 3221 2750856 - 2750842 - g 71 -7 -4.16033 | opp_overlap 2750838 TGGAAAGAACAACAA GCACCG ATG CGGGGC ATGCATGTTGATTTT ACIAD2809 2750734 - 2751462 + | hypothetical protein TERM 3222 2751535 - 2751548 + T 74 -2.3 -5.41359 | opp_overlap 2751534, overlap 2751535 GCCAGCTCAGCCAAG CGACG AGGT CGTAG TTTTTTAATTTGGTT TERM 3223 2751685 - 2751668 - T 100 -8.5 -6.25578 | opp_overlap 2751668 ATCAAACAAAAAAAA GTGATCA TGAT TGATCAC TTTTTTTGTATTACT TERM 3224 2751668 - 2751685 + T 100 -8.5 -5.82172 | opp_overlap 2751668 ATCAAACAAAAAAAA GTGATCA TGAT TGATCAC TTTTTTTGTATTACT ACIAD2810 2751992 - 2751696 - | hypothetical protein TERM 3225 2752228 - 2752203 - R 100 -14.9 -5.13473 | opp_overlap 2752203 2752206 ACCATAGGTAAAAAA TAAGCCCTTGT AAAA ACAAGGGCTTA TTTAAATATTTGGCG TERM 3226 2752203 - 2752228 + r 100 -14.9 -3.81137 | opp_overlap 2752203, overlap 2752206 ACCATAGGTAAAAAA TAAGCCCTTGT AAAA ACAAGGGCTTA TTTAAATATTTGGCG TERM 3227 2752206 - 2752225 + r 95 -12.2 -4.02707 | opp_overlap 2752203, overlap 2752203 ATAGGTAAAAAATAA GCCCTTGT AAAA ACAAGGGC TTATTTAAATATTTG TERM 3228 2753044 - 2753056 + r 80 -10.5 -3.12847 | opp_overlap 2753036 AAGTCAATTGCTTAT CCGCG ATT CGCGG TTAACTATCACCCTT greB 2753544 - 2753071 - | transcription elongation factor and transcript cleavage ACIAD2815 2754060 - 2753611 - | hypothetical protein ACIAD2817 2755177 - 2754416 - | putative transcriptional regulator TERM 3229 2755305 - 2755278 - R 74 -6.4 -4.29106 | TTTTATAGTAATAAA GGAACGATATAC ATTT ATATATCATCCC ATTAGTGTGCTTATT citN 2756590 - 2755319 - | citrate transporter TERM 3230 2755650 - 2755632 - G 73 -2.5 -5.16572 | gap 1, overlap 2755633 2755635 ATCGAAGCTAAAAAA TTACCTGA CGAT TCAGG-AA TAATAGATATTAAAT TERM 3231 2756572 - 2756555 - G 73 -7.1 -4.13246 | TACTGCATACATAAA TATAGCA ATCA TGCTATA GCTAAGAAAAACTAA ACIAD2819 2757552 - 2756626 - | putative gluconolactonase TERM 3232 2757587 - 2757601 + H 72 -5 -4.73432 | opp_overlap 2757575, overlap 2757575 2757582 2757589 TAACGTTCTATTGTA TAGAAC AAT GTTCTG TTTATTTATGTTTGA ACIAD2820 2757745 - 2758725 + | putative hydroxymethylglutaryl-CoA lyase ACIAD2821 2758727 - 2759926 + | putative acyl-CoA transferase/carnitine dehydratase TERM 3233 2761102 - 2761088 - g 71 -8.5 -3.44051 | opp_overlap 2761088 2761087 2761085 2761084 TTTTTATCAGGACAA GCCGC AGCAG GCGGC ATTGCTTTAATTAAC ACIAD2822 2759945 - 2761282 + | MFS family transporter ACIAD2824 2761442 - 2762740 + | hypothetical protein ACIAD2825 2762865 - 2763038 + | fragment of transcription elongation factor (GreB-like) ACIAD2826 2763125 - 2763325 + | fragment of transcription elongation factor (GreB-like) TERM 3234 2763800 - 2763820 + F 90 -4 -5.95166 | overlap 2763803 TGGTTATTTTTTATA CTTTGTAG TTTTT CTACATAG TTTTTTTTAGTTCCA TERM 3235 2763896 - 2763917 + F 74 -2.3 -5.42259 | CCAACTTGAAAAGAA TTTTGACTG CTCT TAGTCGGAA TTTTTTTGGGCGTAA TERM 3236 2764117 - 2764146 + G 100 -10.8 -4.60487 | ACAGCAATACCCTGA CTGTCGTTGCAG TTGAAT CTCCAACGACAG TTTTTAAAGATGGTG ACIAD2827 2763954 - 2765066 + | putative periplasmic binding protein of transport/transglycosylase TERM 3237 2765129 - 2765085 - T 77 -9.6 -3.1203 | gap 1, opp_overlap 2765097, overlap 2765089 2765097 CAATCAGGCAATACA GATATAAAAAAAGCTTACTGC ACAT GC-GTAAGCTTTCTTTACGTC AATCTATCGTGAATT TERM 3238 2765125 - 2765089 - T 84 -11.2 -3.11207 | gap 1, opp_overlap 2765097, overlap 2765085 2765097 CAGGCAATACAGATA TAAAAAAAGCTTACTGC ACAT GC-GTAAGCTTTCTTTA CGTCAATCTATCGTG TERM 3239 2765097 - 2765117 + T 74 -6.2 -4.46514 | gap 1, opp_overlap 2765089 2765085 2765097 ACAGATATAAAAAAA GCTTACTGC ACAT GC-GTAAGC TTTCTTTACGTCAAT TERM 3240 2765117 - 2765097 - T 93 -6.2 -5.77988 | gap 1, opp_overlap 2765097, overlap 2765089 2765085 ACAGATATAAAAAAA GCTTACTGC ACAT GC-GTAAGC TTTCTTTACGTCAAT ACIAD2828 2765526 - 2765143 - | hypothetical protein TERM 3241 2765726 - 2765701 - R 100 -12.7 -5.61596 | opp_overlap 2765701 2765725 ACTCGTATAAAAAAA GCGCCAACTTA TAAA TAAGTTAGCGC TTTGACTGATTAGTC TERM 3242 2765701 - 2765726 + r 87 -10.5 -3.72241 | opp_overlap 2765701, overlap 2765725 ACTCGTATAAAAAAA GCGCCAACTTA TAAA TAAGTTAGCGC TTTGACTGATTAGTC ACIAD2829 2766641 - 2765736 - | hypothetical protein TERM 3243 2766911 - 2766935 + H 73 -4.4 -4.87665 | opp_overlap 2766914, overlap 2766914 TTAAGGGTTTTGTTT AAATTGATCA TTTTT TGATCAATTA TTTTTATAAATCAAA TERM 3244 2766914 - 2766932 + H 74 -6.1 -4.5448 | opp_overlap 2766914, overlap 2766911 AGGGTTTTGTTTAAA TTGATCA TTTTT TGATCAA TTATTTTTATAAATC TERM 3245 2766983 - 2766998 + H 95 -3.4 -6.23209 | overlap 2766979 GTCAAGCTCGCTTTT TTAAAA ATAA TTTTAA TTTTTTTTTGATTAA TERM 3246 2767208 - 2767218 + G 73 -5.4 -4.72272 | ACTGTCCTGTACCGC CATG AGC CATG TTTTTGCTGGGCAAA TERM 3247 2767221 - 2767233 + G 84 -6.3 -5.03994 | GCCATGAGCCATGTT TTTGC TGG GCAAA TTTTTGTCTATAAAG ACIAD2832 2767146 - 2767997 + | putative transglycosylase TERM 3248 2768248 - 2768269 + G 70 -5.1 -4.55544 | AGTTACCATGGCGCG GGTGGCTTA AATC TAGGCAACC TTTTGGTTATCTGTT htpX 2768149 - 2769054 + | heat shock protein HtpX TERM 3249 2769086 - 2769071 - T 100 -10.4 -5.00616 | opp_overlap 2769071 TTCCGCTTCAAAAAA GCCTCC AGAT GGAGGC TTTTTTTATTGGCCT TERM 3250 2769071 - 2769086 + T 100 -10.4 -5.80364 | opp_overlap 2769071 TTCCGCTTCAAAAAA GCCTCC AGAT GGAGGC TTTTTTTATTGGCCT ACIAD2834 2769712 - 2769092 - | hypothetical protein ACIAD2835 2771098 - 2769722 - | putative Mg transporter (MgtE) ACIAD2836 2774401 - 2771273 - | putative multidrug efflux protein TERM 3251 2771950 - 2771936 - G 70 -7.1 -3.89346 | TGGGTATCCCATAAA CCGCT CTAAT AGCGG CGGTGCACCTTGCCA dgkA 2774639 - 2775034 + | diacylglycerol kinase TERM 3252 2775065 - 2775040 - T 93 -7.7 -5.60993 | TTGGGCATAAAAAAA CCATGCTTATC CAGG AATAAACATGG TGAAAACTAGAAACT TERM 3253 2775217 - 2775258 + T 95 -14.7 -3.06302 | opp_overlap 2775227, overlap 2775227 CAAAGCCAAAATCAT TATAAAAAAAGACCGTGAG CAGG CTCACGGTCTTTTTAAATA TTCGATCCCGATCCT TERM 3254 2775248 - 2775227 - T 100 -14.5 -5.67967 | opp_overlap 2775217 2775227 ATCATTATAAAAAAA GACCGTGAG CAGG CTCACGGTC TTTTTAAATATTCGA TERM 3255 2775227 - 2775248 + T 100 -14.5 -4.74706 | opp_overlap 2775227, overlap 2775217 ATCATTATAAAAAAA GACCGTGAG CAGG CTCACGGTC TTTTTAAATATTCGA groEL 2776936 - 2775302 - | chaperonin GroEL TERM 3256 2776178 - 2776154 - G 70 -9.3 -2.87146 | opp_overlap 2776154, overlap 2776153 GTTGTTGACAACAAG TGTTGCAAGCG CTT CGCCTTCAACA TCTTCAGCAATAATC groES 2777287 - 2776997 - | co-chaperonin GroES ACIAD2840 2778244 - 2777468 - | putative 3',5'-cyclic-nucleotide phosphodiesterase TERM 3257 2777512 - 2777502 - G 78 -5.4 -5.07652 | overlap 2777497 GTCTTTAAAACAAAA GCTT TTG AAGC TGGGTCAAACCAATA ACIAD2841 2779166 - 2778225 - | hypothetical protein TERM 3258 2779365 - 2779323 - H 100 -11.1 -4.13648 | opp_overlap 2779332 AATTTGATATACAAA TTCATTTTTTAAATAAATA GTCTT TATTTATTTAAAAAATGCA AATATAAACAACGGA TERM 3259 2779860 - 2779840 - g 72 -6.1 -4.31587 | overlap 2779842 TCTGAAAAACAAGAA GATGCTGGT GCA ACCAACAAC TGGGAAGCTCCAGAA TERM 3260 2779858 - 2779842 - g 70 -7.3 -3.74454 | overlap 2779840 TGAAAAACAAGAAGA TGCTGGT GCA ACCAACA ACTGGGAAGCTCCAG TERM 3261 2780500 - 2780510 + G 74 -6.8 -4.254 | opp_overlap 2780500 2780499 TTATATGCAATTAAT CCAG AAG CTGG TTTCTTCGGTGTTGC pckG 2779570 - 2781399 + | phosphoenolpyruvate carboxykinase TERM 3262 2781441 - 2781416 - f 100 -14.9 -4.68103 | opp_overlap 2781416, overlap 2781420 TTAATTTGAATAAAA TAAAGAGGCCA TGTA TGGCCTCTTTA TTTTTTAGATTCTTT TERM 3263 2781416 - 2781441 + F 100 -14.9 -5.23016 | opp_overlap 2781416 2781420 TTAATTTGAATAAAA TAAAGAGGCCA TGTA TGGCCTCTTTA TTTTTTAGATTCTTT TERM 3264 2781437 - 2781420 - f 100 -11.3 -4.87892 | opp_overlap 2781416, overlap 2781416 TTTGAATAAAATAAA GAGGCCA TGTA TGGCCTC TTTATTTTTTAGATT ACIAD2843 2781523 - 2781909 + | signal peptide glpD 2783501 - 2781978 - | glycerol-3-phosphate dehydrogenase TERM 3265 2783657 - 2783637 - H 83 -9.9 -3.80452 | opp_overlap 2783641, overlap 2783641 AAATCAGACCAATAA TAAATCATC AAC GATGATTTA CCAAAATTATGCGAT TERM 3266 2783653 - 2783641 - H 76 -6.3 -4.5032 | opp_overlap 2783641, overlap 2783637 CAGACCAATAATAAA TCATC AAC GATGA TTTACCAAAATTATG ACIAD2845 2783701 - 2784129 + | hypothetical protein TERM 3267 2784145 - 2784166 + T 70 -8.1 -3.30124 | opp_overlap 2784140 2784139 TTGATGAAATCGCAA GGCATTGTA ATGC TACAATGTC TTGTAGAAACTCACA ACIAD2846 2784825 - 2784157 - | hypothetical protein TERM 3268 2785017 - 2784984 - R 70 -8.3 -3.23768 | opp_overlap 2784984 2784985, overlap 2784983 2784985 GAGAGATAAAATAAT TTTGGTTACTTTTGC CAAA ACAAAAGCAACCAAC TTCTTAGATCACAGA TERM 3269 2785016 - 2784985 - R 84 -11.8 -2.53177 | opp_overlap 2784984 2784985, overlap 2784984 2784983 AGAGATAAAATAATT TTGGTTACTTTTGC CAAA ACAAAAGCAACCAA CTTCTTAGATCACAG folD 2785929 - 2785081 - | bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/5,10-methylene-tetrahydrofolate cyclohydrolase TERM 3270 2786217 - 2786197 - R 85 -11.9 -2.96638 | overlap 2786199 TGAAATAGGTAGACA CAGGGGATT TAA AATCCCCCG CCCTCAAAGCGTGCC TERM 3271 2786215 - 2786199 - R 83 -10.9 -3.03028 | overlap 2786197 AAATAGGTAGACACA GGGGATT TAA AATCCCC CGCCCTCAAAGCGTG TERM 3272 2786252 - 2786280 + r 71 -9 -3.03124 | overlap 2786236 2786255 CGAGTCCGGCCCCGG GCACCATTTTCA ACCAG TGAAAATGGTGA TCTTAAAGAATCCAG TERM 3273 2786255 - 2786277 + r 72 -9.3 -2.74192 | overlap 2786236 2786252 GTCCGGCCCCGGGCA CCATTTTCA ACCAG TGAAAATGG TGATCTTAAAGAATC TERM 3274 2786292 - 2786305 + r 93 -8.1 -5.76633 | opp_overlap 2786291 2786292 2786302, overlap 2786284 2786302 GTGATCTTAAAGAAT CCAGC GAAA GCTGG TTTTTTTATGTCTAA ACIAD2849 2786614 - 2786366 - | hypothetical protein glxK 2786714 - 2787877 + | glycerate kinase TERM 3275 2787996 - 2787976 - T 85 -11.9 -2.96638 | overlap 2787978 TGAAATAGGTAGACA CAGGGGATT TAA AATCCCCCG CCCTCAAAGCGTGCC TERM 3276 2787994 - 2787978 - T 83 -10.9 -3.03028 | overlap 2787976 AAATAGGTAGACACA GGGGATT TAA AATCCCC CGCCCTCAAAGCGTG TERM 3277 2788070 - 2788083 + T 100 -8.1 -6.06529 | opp_overlap 2788069 2788070 GTCACGATAAAGAAT CCAGC AATA GCTGG TTTTTTTTATATCTG TERM 3278 2788314 - 2788326 + T 72 -4.9 -4.77036 | overlap 2788312 TAGTTTATTTAGATT CTATT TAG AATAG TTTTTAATCATCACA ACIAD2851 2788773 - 2788453 - | hypothetical protein folP 2789702 - 2788851 - | 7,8-dihydropteroate synthase TERM 3279 2789786 - 2789754 - R 76 -2.8 -5.41143 | opp_overlap 2789741, overlap 2789755 TACGTTTTAAAAAAA TGATTTCATTTGAC ACCCA GTCAAATAACATCC AAATAAAAAAGAGCT TERM 3280 2789814 - 2789797 - R 100 -11.3 -5.65927 | opp_overlap 2789797 2789813 CATCCAAATAAAAAA GAGCTGC CTAA GCAGCTC TTTCAAACTAAAAGA TERM 3281 2789797 - 2789814 + r 90 -11.3 -3.57144 | opp_overlap 2789797, overlap 2789813 CATCCAAATAAAAAA GAGCTGC CTAA GCAGCTC TTTCAAACTAAAAGA ftsH 2791726 - 2789831 - | cell division protein TERM 3282 2791435 - 2791462 + g 75 -3.4 -5.12987 | gap 1 TCAACAAGCCTTGAC GTTGAGG-TGCAG TAC CTTCAACCACAAC TTTATTTTTGTTTAG TERM 3283 2791832 - 2791820 - R 70 -4.1 -4.66833 | TTGCAATTTCAAAAA GTACA AAA TGCAC AATTTTTAGCAGATT ftsJ 2792510 - 2791860 - | cell division protein (filamentous temperature sensitivity, 23S rRNA U2552 ribose 2'-O-methyltransferase, SAM-dependent) ACIAD2855 2792708 - 2793034 + | hypothetical protein TERM 3284 2793095 - 2793131 + G 71 -8.9 -3.29109 | overlap 2793097 2793099 TTTGATACGATTTCT GT-GGTGGGTGCGATTG AACAA CAATCGC-CCCATCTAC TTAATATCGGATTTT TERM 3285 2793097 - 2793128 + G 81 -11.7 -2.81725 | gap 1, overlap 2793095 2793099 TGATACGATTTCTGT GGTGGGTGCGATTG AACAA CAATCGC-CCCATC TACTTAATATCGGAT TERM 3286 2793099 - 2793126 + G 79 -10.7 -2.95521 | gap 1, overlap 2793097 2793095 ATACGATTTCTGTGG TGGGTGCGATTG AACAA CAATCGC-CCCA TCTACTTAATATCGG ACIAD2856 2793047 - 2793583 + | hypothetical protein TERM 3287 2793607 - 2793589 - T 95 -8.9 -5.42259 | opp_overlap 2793589 TCAGTTTTAAAAAAA GCGAGAT TTTTT ATCTCGC TTTTTTCTTTTTTTA TERM 3288 2793589 - 2793607 + T 100 -8.9 -6.12458 | opp_overlap 2793589 TCAGTTTTAAAAAAA GCGAGAT TTTTT ATCTCGC TTTTTTCTTTTTTTA ACIAD2857 2794048 - 2793620 - | hypothetical protein TERM 3289 2794218 - 2794187 - H 70 -4.6 -4.77757 | opp_overlap 2794185 2794187 TGCTAAAAAGTAAAA TTGAGTAAAAACAA TAAA TTGTTTTAATTCAA TATTTCCAAATAAAA TERM 3290 2794470 - 2794484 + G 75 -5.7 -4.72272 | GTGCTACGGGTTCAA CGACT GGTGA AGTCG TTTTTAATACCGCCA carA 2794394 - 2795533 + | carbamoyl phosphate synthase small subunit TERM 3291 2796690 - 2796674 - g 70 -9.5 -2.78395 | overlap 2796671 2796676 AACCTGTACTAACTA CACAGAT GAA ATCTGTG GGTGAAGTGATGGCT carB 2795548 - 2798781 + | carbamoyl-phosphate synthase, large subunit TERM 3292 2798796 - 2798820 + F 100 -15 -5.75538 | opp_overlap 2798796 ATTCGTTACCGATAA GCCCGTCACC TTATC GGTGGCGGGC TTTTTATTTTTTGAA TERM 3293 2798820 - 2798796 - f 93 -12.8 -3.35798 | opp_overlap 2798796 ATTCGTTACCGATAA GCCCGTCACC TTATC GGTGGCGGGC TTTTTATTTTTTGAA greA 2798871 - 2799347 + | transcription elongation factor, cleaves 3' nucleotide of paused mRNA TERM 3294 2799387 - 2799361 - f 72 -9.4 -2.59883 | overlap 2799357 AAAATTATCAATCGA GTAAGCCTCCTA AAA TTGGGGGCTTAC CAACTTAAACACAAA TERM 3295 2799515 - 2799543 + G 79 -11.1 -3.05384 | overlap 2799519 AAGCATATTCTAGTG GCAGTTGATGGTT CTG AACCATCCATTGC TTCACTCCAGCACGC ACIAD2863 2799491 - 2799949 + | putative universal stress protein A (UspA) ACIAD2864 2800372 - 2799971 - | putative methyltransferase ACIAD2865 2800542 - 2800991 + | putative universal stress protein TERM 3296 2801127 - 2801088 - T 100 -13.8 -4.15543 | opp_overlap 2801099, overlap 2801099 TAAATATTCTTAAAA CAATCAAAAAAGAGGGCT TTAC AGCCCTCTTTTTTTAATG CTTGAATTATTTCAA TERM 3297 2801099 - 2801116 + T 100 -11.3 -5.58074 | opp_overlap 2801099 2801088 AAAACAATCAAAAAA GAGGGCT TTAC AGCCCTC TTTTTTTAATGCTTG TERM 3298 2801116 - 2801099 - T 100 -11.3 -5.43514 | opp_overlap 2801099, overlap 2801088 AAAACAATCAAAAAA GAGGGCT TTAC AGCCCTC TTTTTTTAATGCTTG ACIAD2866 2806320 - 2801143 - | putative hemagglutinin/hemolysin-related protein TERM 3299 2802012 - 2801993 - G 83 -10.8 -3.41726 | opp_overlap 2801991, overlap 2801991 AACAGCCCAATAAGA TCAGCAAG ACTA CTTGCTGA AATGGTATCTACCGT TERM 3300 2804471 - 2804512 + g 83 -8.8 -4.21933 | gap 1 ACTGCACCCACTTGC CCGGTACCACTGATGGTTG GGGTG CGGTCATCGGTGGT-CTGG TTCTTTTGCAGTTCG TERM 3301 2806337 - 2806347 + r 80 -2.6 -5.626 | ACTTTTTCTCTCTAG TATA CTT TATA TTTTTTTGTGCCATC TERM 3302 2806780 - 2806761 - R 75 -5 -4.88711 | opp_overlap 2806761 ACAACATATTAAAAA GGAACC ATATTTCA GGTTCC TTTGTTTACACACTA ACIAD2867 2808292 - 2806793 - | putative Na+/H+ antiporter TERM 3303 2806821 - 2806833 + g 71 -2 -5.11063 | GGATTTTCTAAACGT TTCA CTTCT TGAA TTTTTGTTGGGTGAT ACIAD2868 2808487 - 2809044 + | hypothetical protein TERM 3304 2809065 - 2809047 - T 100 -9.6 -5.35224 | opp_overlap 2809047 CTTAGAAAAATAAAA GAGAAGGC ATA ACCTTCTC TTGTCAAATACTGGC TERM 3305 2809047 - 2809065 + T 75 -8.9 -3.34043 | opp_overlap 2809047 CTTAGAAAAATAAAA GAGAAGG CATAA CCTTCTC TTGTCAAATACTGGC ACIAD2869 2809965 - 2809069 - | hypothetical protein ACIAD2870 2810916 - 2810002 - | hypothetical protein TERM 3306 2810442 - 2810423 - G 79 -7.8 -4.37092 | AGCTTGGTCATAAAA GGTGCCGT TGCA ACGGTACC TAAAGAAATCACTAC trpS 2811122 - 2812135 + | tryptophanyl-tRNA synthetase II TERM 3307 2812182 - 2812201 + T 100 -12.2 -5.10163 | AAAAGATTTAACCTT GTGCGATC AATT GATCGCAC TTTTATTTTGAGGTT TERM 3308 2812353 - 2812374 + T 70 -7.3 -3.82824 | AACATTCTACTTTAC CGAAGCTGT GAAT ACAGATTCG TTGTTATGCGTAATG TERM 3309 2812382 - 2812408 + T 100 -7.4 -6.13 | CAGATTCGTTGTTAT GCGTAATGAT CACCCCA ATCGTTACGC TTTTTTTTTGCCTGT sucD 2813433 - 2812543 - | succinyl-CoA synthetase subunit alpha sucC 2814613 - 2813447 - | succinyl-CoA synthetase subunit beta TERM 3310 2814761 - 2814778 + r 100 -11.3 -5.23016 | opp_overlap 2814761 ACCTTAAACAAAAAA GAGCGGT TTAC ACCGCTC TTTTTTCAATTATTT TERM 3311 2814778 - 2814761 - R 100 -11.3 -5.64421 | opp_overlap 2814761 ACCTTAAACAAAAAA GAGCGGT TTAC ACCGCTC TTTTTTCAATTATTT lpd 2816221 - 2814788 - | dihydrolipoamide dehydrogenase sucB 2817487 - 2816279 - | dihydrolipoamide succinyltransferase, component of 2-oxoglutarate dehydrogenase complex (E2) TERM 3312 2817160 - 2817180 + g 73 -7.5 -4.07687 | opp_overlap 2817160 GCGCACGCTCAACAA CTGGAGCTG CAC CCGCTTCAG TTTTAGCCGCAGCCT kgd 2820327 - 2817487 - | alpha-ketoglutarate decarboxylase TERM 3313 2818925 - 2818941 + g 83 -10.9 -3.44146 | ATCAATGGCTGAGTC GCAGATG GTT CATCTGC TTCATTATGACCACG TERM 3314 2819777 - 2819790 + g 79 -3.1 -5.35815 | overlap 2819778 2819785 GCACCCTCTAAGCGC TGTTG AATC CAACG TTTTTCTTTGGTATC TERM 3315 2820597 - 2820553 - R 77 -8.9 -3.55801 | opp_overlap 2820552 2820553, overlap 2820572 AGCAATTTTTGCAAA TCGTCTTAGAAAAACAAAATA AAC TATTTAGCTTTTCTAAAATGA CTTTTTATATAAAAA TERM 3316 2820582 - 2820572 - R 72 -2.6 -5.35224 | opp_overlap 2820553 2820552, overlap 2820553 CTTAGAAAAACAAAA TAAA CTA TTTA GCTTTTCTAAAATGA TERM 3317 2820867 - 2820848 - R 100 -6.4 -6.02914 | TTTACATAAAAAAAA GCGCACAT CTAA ATGCACGC TTTTTTGACGCATAT sdhB 2821592 - 2820882 - | succinate dehydrogenase iron-sulfur subunit sdhA 2823506 - 2821608 - | succinate dehydrogenase flavoprotein subunit TERM 3318 2823550 - 2823536 - R 74 -6.4 -4.37658 | AATTCGCCCAGAAAA TCTGGA TAC CCCAGA TTGCAAATACAAACA sdhD 2823884 - 2823519 - | succinate dehydrogenase, hydrophobic subunit TERM 3319 2823725 - 2823695 - G 82 -10.6 -3.59946 | CTGCCAATGACAGAA TTGCCAGTAAAGAT AAA ATCTTCATTGGCAA AGTCATCATGAAGCC sdhC 2824285 - 2823884 - | succinate dehydrogenase, cytochrome b556 subunit TERM 3320 2824310 - 2824299 - H 77 -5.8 -4.7254 | opp_overlap 2824299 ATCCTGTAGTAAAAA CTCC AGCT GGAG TTTGTTTGAATTAAT TERM 3321 2824299 - 2824310 + H 74 -5.8 -4.50761 | opp_overlap 2824299 ATCCTGTAGTAAAAA CTCC AGCT GGAG TTTGTTTGAATTAAT TERM 3322 2824672 - 2824683 + H 82 -3 -5.626 | overlap 2824654 TTCATCATTATGATT TGTT TAGC AACA TTTTTTTATGAAATG gltA 2825328 - 2826602 + | citrate synthase TERM 3323 2826644 - 2826628 - T 93 -9.4 -4.31688 | opp_overlap 2826628 AAGAGCAACTTAAAA GACCGC CTAGT GCGGTC TTTTTTATTTTGATG TERM 3324 2826628 - 2826644 + T 100 -9.4 -5.83211 | opp_overlap 2826628 AAGAGCAACTTAAAA GACCGC CTAGT GCGGTC TTTTTTATTTTGATG ACIAD2887 2827132 - 2826671 - | hypothetical protein TERM 3325 2826718 - 2826736 + g 71 -3.1 -5.0133 | AGGCAGCTAAATCAT CACAATC TTGTC GATAGTG TTTTTTCAAAAAATA ACIAD2888 2827405 - 2829030 + | putative glutamine-dependent NAD(+) synthetase (NAD(+) synthase [glutamine-hydrolyzing]) (NadE) TERM 3326 2829053 - 2829087 + G 100 -15.3 -3.78934 | gap 1, opp_overlap 2829056, overlap 2829056 ACATCATCTAGCGAA C-AACTTGCTCAAGCA CTTT TGCTTGAGCAAGTTCG TTATTATCAACAACA TERM 3327 2829083 - 2829056 - g 100 -17.2 -3.68569 | opp_overlap 2829053 2829056 TCATCTAGCGAACAA CTTGCTCAAGCA CTTT TGCTTGAGCAAG TTCGTTATTATCAAC TERM 3328 2829056 - 2829083 + G 100 -17.2 -3.58208 | opp_overlap 2829056, overlap 2829053 TCATCTAGCGAACAA CTTGCTCAAGCA CTTT TGCTTGAGCAAG TTCGTTATTATCAAC TERM 3329 2829357 - 2829370 + G 73 -5.3 -4.62471 | opp_overlap 2829357 ATCATCAATTTGAAA TTTGG CTGT CCAAA TTTTTAGAGCTTGAA TERM 3330 2829827 - 2829842 + G 72 -7.6 -3.86814 | opp_overlap 2829825, overlap 2829825 ATGCAAAATCTAATT CTTCGA GGTG TCGAAG TATTTTATCGATTTT ACIAD2889 2829023 - 2830060 + | hypothetical protein TERM 3331 2830099 - 2830067 - T 81 -10.8 -2.93992 | opp_overlap 2830066 2830065, overlap 2830062 2830069 CAAAATTAAAGACTA CATGTTCAAGCA TCATACAAC TGCTTGAACATG CCTCTTTTTATCATT ACIAD2890 2831292 - 2830114 - | putative signal peptide TERM 3332 2830576 - 2830556 - G 71 -9.7 -2.72227 | opp_overlap 2830556 AAGACGTTCCAACTA TGGCGTGAG CCA CTCAGGCCA TTTTTCTTATTTTTA TERM 3333 2830556 - 2830576 + g 100 -9.7 -5.51353 | opp_overlap 2830556 AAGACGTTCCAACTA TGGCGTGAG CCA CTCAGGCCA TTTTTCTTATTTTTA TERM 3334 2831429 - 2831409 - R 100 -9.1 -6.5058 | opp_overlap 2831409 ATAAATAAAAAAAAA GATCACGTA AGG TACATGATC TTTAAAAATGGTGGC TERM 3335 2831735 - 2831716 - R 100 -12.2 -5.82281 | opp_overlap 2831718 AAAGACATAAAAAAA GACCATGC AGGA GCATGGTC TATAAAATGGTGGCT ACIAD2892 2832528 - 2832265 - | putative ferredoxin [4Fe-4S] (Fdx) coaD 2833021 - 2832530 - | phosphopantetheine adenylyltransferase TERM 3336 2832581 - 2832561 - G 73 -7.5 -4.2349 | TGTTTATATTCAAAA GCCTCAACC ACA GCCTGAGGC ACAAACTTGGCGACA TERM 3337 2833205 - 2833195 - g 71 -3.2 -4.97383 | AGTTAAAAAAAATAA TGGC GGT ACCA TTGCGCAGAATAAAC smpB 2833163 - 2833639 + | SsrA-binding protein TERM 3338 2833676 - 2833641 - T 72 -9.2 -2.67245 | opp_overlap 2833646 2833652, overlap 2833644 2833652 TTATGCATAAGTAAT TTATACAAAAAGCCTT TACT AAGGCTTTTTGTTTGA TTGTTTAATGCAAAC TERM 3339 2833673 - 2833644 - T 81 -10.9 -2.62043 | opp_overlap 2833646 2833652, overlap 2833641 2833652 TGCATAAGTAATTTA TACAAAAAGCCTT TACT AAGGCTTTTTGTT TGATTGTTTAATGCA TERM 3340 2833646 - 2833671 + T 100 -13.5 -4.16371 | opp_overlap 2833644 2833641 2833652, overlap 2833652 CATAAGTAATTTATA CAAAAAGCCTT TACT AAGGCTTTTTG TTTGATTGTTTAATG TERM 3341 2833665 - 2833652 - T 83 -6.7 -5.00642 | opp_overlap 2833646 2833652, overlap 2833644 2833641 TAATTTATACAAAAA GCCTT TACT AAGGC TTTTTGTTTGATTGT TERM 3342 2833652 - 2833665 + T 85 -6.7 -5.39681 | opp_overlap 2833652 2833644 2833641, overlap 2833646 TAATTTATACAAAAA GCCTT TACT AAGGC TTTTTGTTTGATTGT ACIAD2895 2834232 - 2833681 - | putative flavodoxin or tryptophan repressor binding protein ACIAD2896 2835013 - 2834273 - | hypothetical protein TERM 3343 2834560 - 2834528 - G 80 -9.9 -3.59979 | opp_overlap 2834554 TTCGCCCACCTCAAA GCATGGCTGGCTA ATAGCTG CACCCAGCCATGC ATATGCAGGCCCACT TERM 3344 2834702 - 2834713 + g 78 -4.4 -5.22312 | overlap 2834693 GTCGGCTGTCATCAT CATG AGGG CATG TTTTTTGCTCTGAGT rluD 2836080 - 2835028 - | ribosomal large subunit pseudouridine synthase D (pseudouridylate synthase) (Uracil hydrolyase) ACIAD2898 2836153 - 2837208 + | putative competence protein (ComL) TERM 3345 2837256 - 2837236 - f 87 -6.8 -5.52023 | opp_overlap 2837237, overlap 2837237 ATTATCAATAAAAAA GGGCAGGT TTAAT ACCTGCCT TTTTATTTTTGCTTA TERM 3346 2837237 - 2837255 + F 100 -10.3 -5.67529 | opp_overlap 2837236 2837237 TTATCAATAAAAAAG GGCAGGT TTAAT ACCTGCC TTTTTATTTTTGCTT TERM 3347 2837255 - 2837237 - f 87 -10.3 -3.89587 | opp_overlap 2837237, overlap 2837236 TTATCAATAAAAAAG GGCAGGT TTAAT ACCTGCC TTTTTATTTTTGCTT TERM 3348 2837460 - 2837448 - g 100 -4.1 -6.02546 | TCAAACTAAAAAAAA CAGGT AGA ACCTA TTCGGGTTGCTGTCC TERM 3349 2837524 - 2837493 - g 85 -4.4 -5.5112 | opp_overlap 2837493, overlap 2837486 TTCATCAAGAAAAAA GCCCTTCTTTCCAT GTAT ATCGAGACAAGGGC TATTACCATTGCTTT dnaG 2837360 - 2839249 + | DNA primase hemA 2840546 - 2839251 - | glutamyl tRNA reductase ACIAD2901 2840634 - 2842337 + | putative signal peptide lolB 2842341 - 2842922 + | outer-membrane lipoprotein precursor ispE 2842937 - 2843776 + | 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (CMK) (4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase) prs 2844457 - 2845410 + | ribose-phosphate pyrophosphokinase TERM 3350 2845431 - 2845448 + F 80 -6.9 -4.55287 | CAAATTTTTTCTTAA CCCTGGC CTTG GCTGGGG TTTTCTATCACTAAA TERM 3351 2845459 - 2845479 + F 80 -6.9 -4.46233 | TGGGGTTTTCTATCA CTAAACTGG TCG CAAGTTTAG TTTATTTAACCTTAA rplY 2845494 - 2845805 + | 50S ribosomal protein L25 pth 2845826 - 2846407 + | peptidyl-tRNA hydrolase panD 2846544 - 2846924 + | aspartate alpha-decarboxylase TERM 3352 2846943 - 2846959 + F 100 -10.1 -5.28778 | opp_overlap 2846943 AGTCAGTTTTTAAAA GCTCGCG CCA TGCGAGC TTTTTTATGCATGCT TERM 3353 2846959 - 2846943 - f 89 -9.4 -4.09864 | opp_overlap 2846943 AGTCAGTTTTTAAAA GCTCGC GCCAT GCGAGC TTTTTTATGCATGCT TERM 3354 2847091 - 2847056 - f 79 -3.8 -5.45802 | opp_overlap 2847076 TTTTTAAAATAAAAA GCGCTATACTGAAGCG ACAT CGCTTCAGGGCGGGGC GTAATTCCCCACCGG TERM 3355 2847248 - 2847228 - f 77 -9.9 -3.03441 | opp_overlap 2847228 2847233, overlap 2847233 GACGACGTTTCAACA TAAAATAGC TTT GCTATTTTA TTGCTACGCCCCCAT TERM 3356 2847228 - 2847248 + F 77 -9.9 -3.14211 | opp_overlap 2847228 2847233, overlap 2847233 GACGACGTTTCAACA TAAAATAGC TTT GCTATTTTA TTGCTACGCCCCCAT TERM 3357 2847243 - 2847233 - f 74 -5.4 -4.66537 | opp_overlap 2847228 2847233, overlap 2847228 CGTTTCAACATAAAA TAGC TTT GCTA TTTTATTGCTACGCC TERM 3358 2847233 - 2847243 + F 74 -5.4 -4.71426 | opp_overlap 2847233 2847228, overlap 2847228 CGTTTCAACATAAAA TAGC TTT GCTA TTTTATTGCTACGCC ribB 2847313 - 2847972 + | 3,4 dihydroxy-2-butanone-4-phosphate synthase TERM 3359 2847984 - 2848005 + T 90 -8 -5.37171 | TTAGATTTTGATTTA TCCCGAGC AATCGA GTTCGGGA TTTTTATTTACTGTT ACIAD2915 2848779 - 2848294 - | hypothetical protein TERM 3360 2848583 - 2848553 - G 74 -4 -5.07567 | TTAGATTCTAAAAAA TGCATCACGATAAC TAA ATTAGCATGAGGCA ACATTGGAATAAGAA TERM 3361 2848734 - 2848720 - G 75 -8.6 -3.81287 | CACATGATCACCAAA CGTTGT AGA ACAACG TCCAGCACAAGGAGT ACIAD2917 2849066 - 2850010 + | hypothetical protein TERM 3362 2850056 - 2850034 - T 77 -9.2 -3.19789 | opp_overlap 2850034 ATATTTAAGATTCAA GCCGAAATAT TTA AGATTTCGGC TTTTTTATTGTGAAC TERM 3363 2850034 - 2850056 + T 100 -9.2 -5.55769 | opp_overlap 2850034 ATATTTAAGATTCAA GCCGAAATAT TTA AGATTTCGGC TTTTTTATTGTGAAC ACIAD2918 2850637 - 2850071 - | hypothetical protein ACIAD2919 2850928 - 2851530 + | putative DedA family protein ACIAD2920 2851972 - 2851532 - | putative transcriptional regulator ACIAD2921 2852038 - 2852520 + | hypothetical protein TERM 3364 2852848 - 2852877 + G 91 -5.1 -5.58454 | TCTGATCCATTACCA TCACCCACAAA TCGATATT TTTGTCGGTGA TTTTTTTGATCTAAG tpm 2852552 - 2853205 + | thiopurine S-methyltransferase (thiopurine methyltransferase) (tellurite-resistance determinant) (TEL-R determinant) TERM 3365 2853236 - 2853217 - T 93 -7.2 -5.67063 | opp_overlap 2853217 2853209 CTGAGCATAAAAAAA CACCTCTA TTTT TAGAGATG TTTTTTATATATTTT TERM 3366 2853217 - 2853236 + T 83 -5 -5.53079 | opp_overlap 2853217, overlap 2853209 CTGAGCATAAAAAAA CACCTCTA TTTT TAGAGATG TTTTTTATATATTTT ACIAD2923 2853887 - 2853363 - | hypothetical protein TERM 3367 2853944 - 2853917 - R 87 -13 -2.68305 | opp_overlap 2853915 2853925, overlap 2853914 2853913 CTAAAAATTAACGCA TAGCATAACATT TTCA AATGTTATGCTA CATCTGATTTTCGTT ACIAD2924 2854167 - 2853958 - | hypothetical protein rpoD 2854534 - 2856423 + | sigma D (sigma 70) factor of RNA polymerase, major sigma factor during exponential growth TERM 3368 2856514 - 2856487 - f 93 -13.6 -3.29937 | opp_overlap 2856491, overlap 2856485 2856483 2856491 TAATATTCAAAGACA TTAATGCCTGCA TCAT CGCAGGCATTAA ATATGGAGAATGTTA TERM 3369 2856510 - 2856491 - f 81 -10 -3.42659 | opp_overlap 2856491, overlap 2856487 2856485 2856483 ATTCAAAGACATTAA TGCCTGCA TCAT CGCAGGCA TTAAATATGGAGAAT TERM 3370 2856491 - 2856510 + F 74 -9.3 -3.1247 | opp_overlap 2856491 2856487 2856485 2856483 ATTCAAAGACATTAA TGCCTGC ATCATC GCAGGCA TTAAATATGGAGAAT ACIAD2926 2856517 - 2856816 + | hypothetical protein TERM 3371 2856842 - 2856823 - f 78 -7.8 -4.1891 | opp_overlap 2856825, overlap 2856825 GCCCTCTAAGATAAA GACACGCC TTCT GGCGTGTT TTTTATTGGCATTTC TERM 3372 2856825 - 2856840 + F 100 -10.4 -5.4756 | opp_overlap 2856825 2856823 CCTCTAAGATAAAGA CACGCC TTCT GGCGTG TTTTTTATTGGCATT TERM 3373 2856840 - 2856825 - f 86 -10.4 -3.6944 | opp_overlap 2856825, overlap 2856823 CCTCTAAGATAAAGA CACGCC TTCT GGCGTG TTTTTTATTGGCATT lipB 2856887 - 2857546 + | lipoate-protein ligase B (lipoate biosynthesis protein B) TERM 3374 2857595 - 2857570 - f 79 -4.1 -5.252 | overlap 2857574 CAGTTCGAGAAAAAA TCAATTAGAGT AATT ACTCTAAATAA AATTAGAATCTGTAA TERM 3375 2857591 - 2857574 - f 73 -7.1 -3.99236 | overlap 2857570 TCGAGAAAAAATCAA TTAGAGT AATT ACTCTAA ATAAAATTAGAATCT ACIAD2928 2857625 - 2858158 + | hypothetical protein ACIAD2929 2858161 - 2859345 + | putative alcohol dehydrogenase TERM 3376 2859372 - 2859398 + F 100 -9.5 -5.28942 | GTACATTCGCCTACA GGCCTGAGTTC TCAAT GAATTCAGGTC TTTTTATTTAAAATA ACIAD2930 2859579 - 2860991 + | amino acid APC transporter TERM 3377 2861030 - 2861000 - T 100 -14.2 -3.64049 | opp_overlap 2861002 2861009 2861024, overlap 2861002 2861009 TGAATAATCTTCAAA TATAAAAAAGGCGC TCA GCGCCTTTTTTATT GTTAATTTTTAATCA TERM 3378 2861002 - 2861028 + T 100 -16.8 -4.03474 | opp_overlap 2861000 2861002 2861009, overlap 2861009 2861024 AATAATCTTCAAATA TAAAAAAGGCGC TCA GCGCCTTTTTTA TTGTTAATTTTTAAT TERM 3379 2861028 - 2861002 - T 100 -16.8 -3.39429 | opp_overlap 2861002 2861009 2861024, overlap 2861000 2861009 AATAATCTTCAAATA TAAAAAAGGCGC TCA GCGCCTTTTTTA TTGTTAATTTTTAAT TERM 3380 2861009 - 2861021 + T 100 -10.5 -5.66229 | opp_overlap 2861002 2861000 2861009, overlap 2861002 TTCAAATATAAAAAA GGCGC TCA GCGCC TTTTTTATTGTTAAT TERM 3381 2861021 - 2861009 - T 100 -10.5 -5.56264 | opp_overlap 2861009 2861002, overlap 2861002 2861000 TTCAAATATAAAAAA GGCGC TCA GCGCC TTTTTTATTGTTAAT ACIAD2931 2861614 - 2861039 - | putative flavodoxin or tryptophan repressor binding protein ACIAD2932 2861727 - 2862107 + | putative transcriptional regulator ACIAD2933 2862581 - 2862102 - | putative tRNA/rRNA methyltransferase cysG 2863992 - 2862619 - | multifunctional protein [Includes: uroporphyrin-III C-methyltransferase (Urogen III methylase) (SUMT) (uroporphyrinogen III methylase) (UROM); precorrin-2 oxidase; ferrochelatase ] (siroheme synthase) serS 2865328 - 2864057 - | seryl-tRNA synthetase TERM 3382 2865411 - 2865388 - R 95 -9 -5.0538 | opp_overlap 2865388 CTTCACGCCAAAAAA TATAGTCACC CTTG AGTGACTATA TTTTTAAATTGGATA TERM 3383 2865388 - 2865411 + r 86 -8.3 -4.75174 | opp_overlap 2865388 CTTCACGCCAAAAAA TATAGTCAC CCTTGA GTGACTATA TTTTTAAATTGGATA ACIAD2936 2866215 - 2865433 - | hypothetical protein TERM 3384 2865582 - 2865565 - G 74 -6.3 -4.56969 | AAGCGGATAAACAAA GACAATG CCCT CATTGCC ATAATAGAAATTATC TERM 3385 2865700 - 2865720 + g 80 -2.5 -5.5112 | ACTGCCTTCTTTCAG CAGATCAGC CAC GGTGATGTG TTTTTTATTGGTGAG TERM 3386 2866348 - 2866324 - R 100 -9.4 -5.34555 | opp_overlap 2866328 TGACACCATAAAAAA TTAATCGCCC TAAAT GAGCGATTAA TTGAAATAATATTTT TERM 3387 2866397 - 2866376 - R 71 -7.5 -3.63627 | TTTCGACATCTTAAA GATATTATT GATC AATAATATC CGTGCCTTTAGGTGG lolA 2867072 - 2866380 - | outer-membrane lipoproteins carrier protein TERM 3388 2867262 - 2867232 - R 93 -14.2 -2.86181 | opp_overlap 2867240 2867258, overlap 2867240 GTACAACATTAAGCA TAAAAAAAGCCCAC AAC GTGGGCTTTTTTGA ACAATTCAAATCTTA TERM 3389 2867240 - 2867254 + r 100 -11.4 -5.03145 | opp_overlap 2867232 2867240 TTAAGCATAAAAAAA GCCCAC AAC GTGGGC TTTTTTGAACAATTC TERM 3390 2867254 - 2867240 - R 100 -11.4 -5.71983 | opp_overlap 2867240, overlap 2867232 TTAAGCATAAAAAAA GCCCAC AAC GTGGGC TTTTTTGAACAATTC rpmA 2867532 - 2867275 - | 50S ribosomal protein L27 rplU 2867862 - 2867551 - | 50S ribosomal protein L21 ispB 2868306 - 2869283 + | octaprenyl-diphosphate synthase (octaprenyl pyrophosphate synthetase) (OPP synthetase) TERM 3391 2870373 - 2870354 - g 74 -7.8 -3.91897 | opp_overlap 2870353 CTGGGCATGTATAAA GCAGCAGC AGGT GCTGGTGC CATTATCGCTATAAT TERM 3392 2870537 - 2870516 - g 70 -7.9 -3.72695 | ACTGTTGCCACCAAA CAGCCAGCG ATGA CGGCGGCTG CACTTGCCGCAACTG TERM 3393 2870799 - 2870812 + G 72 -8.1 -3.88946 | CACATGCAGCAATTG CAGGC GTGT GCCTG TTCTTGTCTGGCCTG TERM 3394 2871274 - 2871285 + G 75 -2.2 -5.26316 | GACTCACTTTTTGAC TCGT CCAA GCGA TTTTTTCTGGCCTCC ACIAD2941 2869298 - 2871358 + | hypothetical protein TERM 3395 2871457 - 2871440 - f 95 -8.5 -5.45726 | opp_overlap 2871440 TAGACTTGAAAAAAA GTGTACT CGAA AGTACAC TTTAAATTCTAAAAC TERM 3396 2871440 - 2871457 + F 79 -8.5 -3.80625 | opp_overlap 2871440 TAGACTTGAAAAAAA GTGTACT CGAA AGTACAC TTTAAATTCTAAAAC ACIAD2942 2871510 - 2872127 + | putative phosphatidylglycerophosphatase B (PgpB) TERM 3397 2872267 - 2872241 - g 100 -8.8 -4.6856 | TAAAGATCCTAAAAA TGCTGAACAG GCTGGTG CTGCTCAGCA AATGCCACCACCACA acrA 2872149 - 2873414 + | acriflavine resistance protein A precursor TERM 3398 2875255 - 2875242 - g 78 -5.3 -5.00339 | ATGAATAAGGAAAAA GATTC GGTC GAATC AATCTTTACTGTTGC TERM 3399 2875921 - 2875935 + G 71 -10 -2.62292 | overlap 2875919 2875918 TGAACATTCAGGGTT CACCTG CTA CAGGTG TAAGTTCTGGTGATT acrB 2873427 - 2876606 + | acridine efflux pump oprM 2876603 - 2878057 + | major intrinsic multiple antibiotic resistance efflux outer membrane protein precursor TERM 3400 2878078 - 2878093 + F 87 -6.8 -5.45652 | opp_overlap 2878078 TATTCGATACTTAAA GCTCAC TTCG GTGGGC TTTTTTATTGGAGAT TERM 3401 2878116 - 2878128 + F 79 -4.1 -5.27399 | TTGGAGATTTTCATT GCATT GAC GATGC TTTTTTCATATCTTG ACIAD2946 2878196 - 2878522 + | hypothetical protein ACIAD2947 2878532 - 2878987 + | hypothetical protein ACIAD2948 2879820 - 2879014 - | putative oxidoreductase/dehydrogenase ACIAD2949 2880524 - 2879847 - | hypothetical protein TERM 3402 2880394 - 2880374 - G 74 -4.8 -4.75404 | gap 1 AAAGCTCAGTAAAAA CCTGTTCAA TAAT TTGA-CAGG CAATATCTGAGAGTA TERM 3403 2880813 - 2880800 - g 73 -3.8 -5.06816 | ATCTGGGAAGAAAAA GGCT ATTTTA AGCC ATCCGGTCAAGGTGA TERM 3404 2880817 - 2880832 + G 71 -4 -4.76193 | gap 1, overlap 2880819 CTATTTTAAGCCATC CG-GTCA AGG TGACTCG TTTTGTATTATGATT valS 2880692 - 2883607 + | valyl-tRNA synthetase TERM 3405 2883634 - 2883651 + T 88 -6.9 -5.09521 | opp_overlap 2883634 2883635, overlap 2883635 TTTAATTTAAAAAAA CCCCCTC AATT GAGGGGA TTTTTCATTTATTAA TERM 3406 2883651 - 2883634 - T 100 -9.1 -5.53288 | opp_overlap 2883634 2883635, overlap 2883635 TTTAATTTAAAAAAA CCCCCTC AATT GAGGGGA TTTTTCATTTATTAA TERM 3407 2883635 - 2883650 + T 86 -10.4 -3.64086 | opp_overlap 2883634 2883635, overlap 2883634 TTAATTTAAAAAAAC CCCCTC AATT GAGGGG ATTTTTCATTTATTA TERM 3408 2883650 - 2883635 - T 93 -10.4 -3.90888 | opp_overlap 2883635 2883634, overlap 2883634 TTAATTTAAAAAAAC CCCCTC AATT GAGGGG ATTTTTCATTTATTA ACIAD2951 2883871 - 2883656 - | hypothetical protein TERM 3409 2884660 - 2884683 + G 73 -9 -3.56958 | overlap 2884663 CGAAGAAGCTATTCT TAAGGCTTTA GCAA TAAAGCCTTG TTATGATATTGTTCC TERM 3410 2884663 - 2884680 + G 75 -8.5 -3.89893 | overlap 2884660 AGAAGCTATTCTTAA GGCTTTA GCAA TAAAGCC TTGTTATGATATTGT ACIAD2953 2884139 - 2885026 + | hypothetical protein TERM 3411 2885180 - 2885198 + T 91 -13.2 -3.21276 | overlap 2885178 2885166 TTATTACCTCTCCCT TGAGCAGC AAT GCTGCTCA TCTTCTAAAAGGGGA ACIAD2955 2886346 - 2885288 - | hypothetical protein TERM 3412 2886292 - 2886305 + g 71 -2.4 -5.15167 | GTTTTTTCTGCGGCC CAGA TACGTC TCTG TTTTTCTTGATCGTA ACIAD2956 2887306 - 2886401 - | hypothetical protein TERM 3413 2886557 - 2886545 - G 78 -4.1 -5.15969 | TGGCAATGCAAAAAA GACCA CCA TGATC TGGGTTTCGAGTGCC ACIAD2958 2887667 - 2888884 + | putative ammonium transporter TERM 3414 2888904 - 2888920 + F 100 -11.5 -5.626 | TCAGTTTGTGCTTTT GCGGCTC TCA GGGCCGC TTTTTTTATACGCTA TERM 3415 2889563 - 2889575 + G 71 -3.3 -5.00616 | opp_overlap 2889563 GATGGGCACAAATGA TGCGC GGT GCACA TTTTTTAAGCCACAA ACIAD2959 2888947 - 2889696 + | hypothetical protein qseC 2891157 - 2889832 - | two-component sensor kinase transcription regulator protein TERM 3416 2890869 - 2890879 + g 70 -5.4 -4.46656 | TTTTAACTGGTGGAA TCAG AAG CTGA TTTTCATCTTGTAGA qseB 2891849 - 2891169 - | transcriptional regulator TERM 3417 2891638 - 2891627 - G 75 -5.8 -4.62203 | opp_overlap 2891627 2891629, overlap 2891622 2891629 CTGAAATAATTAAAA CTGG TACG CCAG TTTTCTGACGAATCT TERM 3418 2891627 - 2891638 + g 70 -5.8 -4.38154 | opp_overlap 2891627 2891622 2891629, overlap 2891629 CTGAAATAATTAAAA CTGG TACG CCAG TTTTCTGACGAATCT ACIAD2963 2893510 - 2892263 - | MFS family transporter ACIAD2964 2893620 - 2894270 + | putative acyltransferase ACIAD2965 2894336 - 2895253 + | putative esterase TERM 3419 2895300 - 2895321 + F 89 -8.7 -4.42386 | opp_overlap 2895300 TCTGGTACAGTGAAA GGGCGGTGA TCTG TCATCGCTC TTTTATACATAACAA ACIAD2966 2895352 - 2895822 + | hypothetical protein ACIAD2967 2895832 - 2896689 + | putative membrane protease subunit TERM 3420 2896737 - 2896713 - T 100 -13 -5.4833 | opp_overlap 2896713 GCATTCAATAAAAAA GCGGTTTCAT CTTTT ATGAAACCGC TTTTTTAATACAACA TERM 3421 2896713 - 2896737 + T 100 -13 -5.14563 | opp_overlap 2896713 GCATTCAATAAAAAA GCGGTTTCAT CTTTT ATGAAACCGC TTTTTTAATACAACA ispA 2897673 - 2896765 - | geranyltranstransferase (farnesyldiphosphate synthase) (FPP synthase) TERM 3422 2898367 - 2898385 + G 72 -7.4 -3.93659 | opp_overlap 2898371 GGAAATGATTGTACA TGAACCCG TTG CAGGTTCA TTTAGTCATTTTGCT TERM 3423 2898755 - 2898775 + G 71 -3.1 -4.946 | CCAAACGGTTTTGAA GGCCTGTTT TAT ATGCTGGCC TTTTTAATGTTTGCT aroP 2898161 - 2899519 + | aromatic amino acid APC transporter TERM 3424 2899549 - 2899568 + F 93 -8 -5.73978 | opp_overlap 2899549 GATAAAATTAAAAAA GTTATTAC TTCG GTAATAAC TTTTTTGTTTATACT TERM 3425 2899568 - 2899549 - f 93 -8 -5.50313 | opp_overlap 2899549 GATAAAATTAAAAAA GTTATTAC TTCG GTAATAAC TTTTTTGTTTATACT ACIAD2971 2899827 - 2899988 + | hypothetical protein ACIAD2972 2900303 - 2899998 - | hypothetical protein kdpE 2901091 - 2900378 - | regulator of kdp operon (transcriptional effector) kdpD 2903746 - 2901101 - | sensory kinase in two-component regulatory system wtih KdpE, regulates high-affinity potassium transport system TERM 3426 2903134 - 2903123 - G 73 -3.6 -5.03314 | overlap 2903125 TGCAGGTTTAAAAAA GCCC TGCA AGGC ATGCGGTGCCATATC kdpC 2904383 - 2903754 - | potassium-transporting ATPase C chain TERM 3427 2903893 - 2903912 + g 75 -8.6 -3.89212 | gap 1, opp_overlap 2903893 2903896, overlap 2903888 TCCTGCTCACTCAAA CGACGTTGC TGT GCAACG-CG TTTAATCTGTAGCTG TERM 3428 2903912 - 2903893 - G 73 -8.6 -3.64703 | gap 1, opp_overlap 2903893 2903888, overlap 2903896 TCCTGCTCACTCAAA CGACGTTGC TGT GCAACG-CG TTTAATCTGTAGCTG TERM 3429 2903910 - 2903896 - G 73 -10 -2.94144 | opp_overlap 2903893 2903888, overlap 2903893 TGCTCACTCAAACGA CGTTGC TGT GCAACG CGTTTAATCTGTAGC kdpB 2906408 - 2904393 - | potassium-transporting ATPase subunit B TERM 3430 2904579 - 2904561 - G 71 -8.2 -3.54158 | opp_overlap 2904576 2904577, overlap 2904577 CATTGGAATAATCAA GGCATTAA AAA TCAATGCC GAAATCACGGCGCTT TERM 3431 2905561 - 2905574 + g 71 -6.7 -4.08064 | GCTTTACCCGATTTA GCCAA TACA TTGGC TTTTAGGGCACGGTT kdpA 2908134 - 2906425 - | potassium-transporting ATPase subunit A ACIAD2979 2908785 - 2908333 - | AsnC family transcriptional regulator TERM 3432 2908504 - 2908494 - G 71 -8.2 -3.48024 | overlap 2908492 2908495 CGGGATCACCAAAGA GGCG CTG CGCC TGCACAATTTGTGGA ACIAD2980 2908938 - 2909552 + | putative amino acid efflux transmembrane protein TERM 3433 2909658 - 2909627 - T 100 -19 -3.15249 | opp_overlap 2909635, overlap 2909635 CACATTTGTCAGCAA TTAAAAAAGCGGGC TTAA GCCCGCTTTTTTAA TGTCAACTGGTTTAA TERM 3434 2909650 - 2909635 - T 100 -11.8 -5.30155 | opp_overlap 2909635, overlap 2909627 TCAGCAATTAAAAAA GCGGGC TTAA GCCCGC TTTTTTAATGTCAAC TERM 3435 2909635 - 2909650 + T 100 -11.8 -5.21709 | opp_overlap 2909635 2909627 TCAGCAATTAAAAAA GCGGGC TTAA GCCCGC TTTTTTAATGTCAAC ACIAD2981 2910188 - 2909670 - | hypothetical protein cysI 2911791 - 2910148 - | sulfite reductase TERM 3436 2911921 - 2911939 + r 100 -10.3 -5.67063 | opp_overlap 2911921 GATTTATTTTAAAAA GCCCAGA ATCAA TCTGGGC TTTTTTTATGGTGAA TERM 3437 2911939 - 2911921 - R 100 -10.3 -4.62783 | opp_overlap 2911921 GATTTATTTTAAAAA GCCCAGA ATCAA TCTGGGC TTTTTTTATGGTGAA gcd 2914372 - 2911967 - | glucose dehydrogenase [pyrroloquinoline-quinone] precursor (quinoprotein glucose DH) TERM 3438 2912446 - 2912460 + g 86 -10 -3.93369 | TACCATGCTCTGTTC CTGCAC CAC GTGCAG TTTCCTTACGGTTCG TERM 3439 2912684 - 2912697 + g 79 -6.7 -4.65722 | opp_overlap 2912683 2912684 CAACTGATCAAACAT TGTGG CACC CCACA TTTGTTTGTCTGTAA TERM 3440 2913901 - 2913912 + g 70 -5.8 -4.30416 | CATCAACACCTTCAA CTGC TTGT GCAG TTTTGGGTTGCTCAT ACIAD2984 2915770 - 2914520 - | putative glucose-sensitive porin (OprB-like ) TERM 3441 2914838 - 2914823 - G 75 -3.3 -5.14563 | TGCTTCATCAAAAAA TGTAG CTTGAC CTACA ACTTTTAAACCACGA ACIAD2985 2917036 - 2915918 - | putative acyl-CoA transferase/carnitine dehydratase TERM 3442 2917175 - 2917153 - H 71 -3.5 -5.10033 | overlap 2917154 TTAACATAAACAAAA TGATTTACA TCTGT TGTAAATCG CCAATCGAATATTAT ACIAD2986 2917210 - 2918256 + | AraC family transcriptional regulator TERM 3443 2918273 - 2918291 + T 93 -7.4 -5.54885 | opp_overlap 2918271 TTTTACGAATTTAGA GTCTGGTT AAA ACCCAGAC TTTTTTATTGGTATT ACIAD2987 2918841 - 2918308 - | putative kinase TERM 3444 2918945 - 2918930 - H 71 -3.3 -5.06103 | opp_overlap 2918941 AGAATTGGCAAAAAA CATCA TTTGTC TGATG ACCTTCTCGTCATTG ACIAD2988 2919024 - 2920232 + | acetyl-CoA acetyltransferase ACIAD2989 2920243 - 2922378 + | putative 3-hydroxybutyryl-CoA epimerase TERM 3445 2922399 - 2922423 + F 77 -9.4 -3.21872 | gap 1, overlap 2922417 ATTTTCTATCACTCA CTCCTGCCCTA GATT TAGG-CAGGAG TTGCATCTATTTGAA ACIAD2990 2922519 - 2922767 + | hypothetical protein ACIAD2991 2922783 - 2923640 + | putative esterase ACIAD2992 2924090 - 2923665 - | hypothetical protein ACIAD2993 2924695 - 2924045 - | hypothetical protein ACIAD2994 2925240 - 2924785 - | putative acetyl transferase ACIAD2995 2926481 - 2925258 - | putative methyltransferase TERM 3446 2927151 - 2927139 - g 71 -3.4 -5.02074 | TTATGCCTTAAAAAA GGTA AGATA TACC CATGCTATCTGGCAT ACIAD2996 2926501 - 2927226 + | putative hemolysin III (HLY-III) ACIAD2997 2927368 - 2928678 + | MFS family transporter TERM 3447 2928690 - 2928703 + F 93 -8.1 -5.72616 | opp_overlap 2928690 CTAATCATTCAAAAA CCAGC ACAT GCTGG TTTTTTTATATCGAT TERM 3448 2928703 - 2928690 - f 86 -8.1 -4.7078 | opp_overlap 2928690 CTAATCATTCAAAAA CCAGC ACAT GCTGG TTTTTTTATATCGAT ACIAD2999 2928792 - 2929574 + | hypothetical protein ACIAD3000 2930615 - 2929593 - | hypothetical protein TERM 3449 2930592 - 2930582 - G 76 -2.6 -5.3671 | overlap 2930587 AATAGAAGTAAAAAA TAAT TGA ATTA AAATTCCACATACCA TERM 3450 2931334 - 2931303 - g 76 -9.4 -3.50393 | CTTTATTGCAGACAA TCAGGTTGCGCTCA TTGG CGGGCGCAACATGA CCAATCAGTACTACA ACIAD3001 2930785 - 2932344 + | putative phospholipase D protein ACIAD3002 2933152 - 2932337 - | putative acyltransferase TERM 3451 2933494 - 2933513 + H 83 -8 -4.27316 | opp_overlap 2933494 2933492 TTCGCTTGAGTAACA GGATTATT CTAG AATAATCC TTTTCGCTTAAACGA hflX 2933543 - 2934877 + | GTP-binding protein TERM 3452 2935140 - 2935154 + G 70 -2.8 -5.04385 | opp_overlap 2935140 CAACAAAATCATGAA GGAAAG TGG CTTTGC TTTTTTACCCATCTG ACIAD3006 2934922 - 2935293 + | hypothetical protein ACIAD3007 2935307 - 2935975 + | hypothetical protein apaH 2936883 - 2936032 - | diadenosine tetraphosphatase ksgA 2937710 - 2936886 - | S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase, kasugamycin resistance pdxA 2938689 - 2937721 - | 4-hydroxythreonine-4-phosphate dehydrogenase (4-(phosphohydroxy)-L-threonine dehydrogenase) rplM 2938994 - 2939422 + | 50S ribosomal protein L13 rpsI 2939435 - 2939821 + | 30S ribosomal protein S9 TERM 3453 2939865 - 2939845 - f 100 -9.7 -4.38712 | opp_overlap 2939847, overlap 2939847 TCGAGTTGGACAAAA GACCTCGGA TTT TCCGAGGTT TTTTTATATTTGACG TERM 3454 2939847 - 2939863 + F 100 -12.3 -5.88197 | opp_overlap 2939845 2939847 GAGTTGGACAAAAGA CCTCGGA TTT TCCGAGG TTTTTTTATATTTGA TERM 3455 2939863 - 2939847 - f 95 -12.3 -3.80133 | opp_overlap 2939847, overlap 2939845 GAGTTGGACAAAAGA CCTCGGA TTT TCCGAGG TTTTTTTATATTTGA TERM 3456 2940110 - 2940126 + G 75 -3 -5.1675 | gap 1 CATGCAGATGATTTT CG-ATCC CACT GGATTCG TTTTTTACTGGCTGA sspA 2940050 - 2940700 + | stringent starvation protein A TERM 3457 2941109 - 2941099 - g 75 -3.2 -5.10208 | CAAGCTGAAGAAAAA TCCG AAA CAGA AACTAAGAAAAAACC sspB 2940712 - 2941146 + | ClpXP protease specificity-enhancing factor ACIAD3016 2941165 - 2941833 + | hypothetical protein TERM 3458 2941842 - 2941872 + F 100 -10.7 -4.29621 | gap 1, opp_overlap 2941840 2941851, overlap 2941844 2941851 AGGCTAAACCAACTC CA-TAAAAAAGGGC TTGA GCCCTTTTTTACTG TTTGATTTCTTTCTA TERM 3459 2941844 - 2941869 + F 89 -13.5 -2.81628 | opp_overlap 2941840 2941851, overlap 2941842 2941851 GCTAAACCAACTCCA TAAAAAAGGGC TTGA GCCCTTTTTTA CTGTTTGATTTCTTT TERM 3460 2941851 - 2941862 + F 89 -7.2 -5.32699 | opp_overlap 2941840 2941851, overlap 2941844 2941842 CAACTCCATAAAAAA GGGC TTGA GCCC TTTTTTACTGTTTGA TERM 3461 2941862 - 2941851 - f 89 -7.2 -5.27923 | opp_overlap 2941851 2941844 2941842, overlap 2941840 CAACTCCATAAAAAA GGGC TTGA GCCC TTTTTTACTGTTTGA TERM 3462 2941914 - 2941938 + F 100 -14.3 -4.00532 | opp_overlap 2941914 TTCTACATAAAAAAA GCCCCCTGATT TTG ATTCAGGGGGC TTTAGTATTTAAAAG TERM 3463 2941938 - 2941914 - f 100 -14.3 -5.71712 | opp_overlap 2941914 TTCTACATAAAAAAA GCCCCCTGATT TTG ATTCAGGGGGC TTTAGTATTTAAAAG TERM 3464 2943871 - 2943885 + F 80 -7.1 -4.56607 | overlap 2943864 TGGTCTTTCGGCGAA CGGGT TTTTC ACCCG TTTTGTCGTTACTCA TERM 3465 2944663 - 2944675 + F 89 -9.1 -4.2354 | AGGATCTATTTCACT CCCCT CAC AGGGG TTCTTTTCGCCTTTC TERM 3466 2945450 - 2945435 - f 73 -7.6 -3.8766 | overlap 2945445 TCAGATCACACTAAA CTGTGA TAAA TCACAG AGGTTAATAAACTTT TERM 3467 2945554 - 2945570 + F 72 -9.5 -2.7676 | opp_overlap 2945547 TGCTTAAATTTCAAG GAAAAGC GTT GCTTTTC TGCTCTTGAAATTTG TERM 3468 2945729 - 2945745 + F 81 -10.9 -2.62396 | overlap 2945721 2945731 TTGAACTTGTGACCC CACGCTT ATC AAGCGTG TGCTCTAACCAACTG TERM 3469 2945848 - 2945867 + F 72 -9.2 -2.65808 | opp_overlap 2945839, overlap 2945845 TAAGGAGGTGATCCA GCCGCAGG TTCC CCTACGGC TACCTTGTTACGACT TERM 3470 2947676 - 2947691 + F 81 -6.2 -4.99035 | opp_overlap 2947675 CAATCTAGCCAAATC CTTGTT TCTC AACAAG TTTTTATCTGCATCA TERM 3471 2948342 - 2948327 - g 82 -4.6 -5.31456 | TCAATTTAGAAAAAA CCTAGG TGAG CCTTGG AATGCAGTAAACCAG ACIAD3018 2947926 - 2948852 + | putative lipoprotein precursor (VacJ) transmembrane ACIAD3019 2948985 - 2949953 + | putative two-component response regulator ACIAD3020 2950007 - 2950588 + | putative anti-anti-sigma factor ACIAD3021 2950613 - 2951437 + | putative carbon-nitrogen hydrolase ACIAD3022 2951503 - 2951964 + | MarR family transcriptional regulator TERM 3472 2952004 - 2952021 + F 70 -7.1 -3.86822 | ACTTGAACGGTTTTT TATATCG TGTA CGATATA TTTGTACACAAATTA ohr 2952049 - 2952480 + | organic hydroperoxide resistance protein TERM 3473 2952522 - 2952503 - T 80 -6.4 -4.66609 | opp_overlap 2952505, overlap 2952505 TACTGTATGTAAAAA GAGCACCT TTTG AGGTGCTT TTTTAATCAATCTAT TERM 3474 2952505 - 2952520 + T 95 -9 -5.17353 | opp_overlap 2952503 2952505 CTGTATGTAAAAAGA GCACCT TTTG AGGTGC TTTTTTAATCAATCT TERM 3475 2952520 - 2952505 - T 82 -9 -3.94812 | opp_overlap 2952505, overlap 2952503 CTGTATGTAAAAAGA GCACCT TTTG AGGTGC TTTTTTAATCAATCT xcpR 2954024 - 2952534 - | general secretion pathway protein E (Type II traffic warden ATPase) TERM 3476 2953353 - 2953367 + g 84 -10 -3.85698 | TAAATGAGTCATATT CAAGCG TCC CGCTTG TTTATCCAACAAACG TERM 3477 2954338 - 2954305 - g 76 -9.7 -3.24902 | opp_overlap 2954311, overlap 2954310 2954311 CAATACGATTATGAA CAAAACTGGCATCCG ATTT CCGATACCAATTTTG CCTGTCCACAACCGC TERM 3478 2954897 - 2954914 + G 75 -5.5 -4.90217 | ATGTACATCCTCCTC GTTCTCC TGGG GGAGCAC TTTTTAATATGTTTG ACIAD3025 2954122 - 2954943 + | hypothetical protein TERM 3479 2955768 - 2955778 + G 74 -6.8 -4.36914 | ATCGAAATTCCTGTT CCCA AAA TGGG TTTTGTGGACCGCCC ACIAD3026 2954952 - 2955872 + | putative small conductance mechanosensitive ion channel TERM 3480 2955931 - 2955917 - T 75 -10 -2.72471 | overlap 2955916 GTGTCACCATACAAC TGGGTG GCA CACCCA TCTCAATCGTATATT ACIAD3028 2958969 - 2956060 - | hypothetical protein TERM 3481 2956312 - 2956300 - G 73 -5.5 -4.72007 | overlap 2956308 GGTCATCAAAACAAA GGCCA GAA TGACC CAAAGCAAGGTCAGG TERM 3482 2957040 - 2957022 - G 82 -6 -5.02074 | overlap 2957035 TCAGCCCTGAAAAAA GCAACAAT AAA ATTGTGGC TACTGCCAGATAAGG polA 2959118 - 2961880 + | DNA polymerase I, 3'--> 5' polymerase, 5'--> 3' and 3'--> 5' exonuclease TERM 3483 2961923 - 2961890 - T 95 -12.7 -3.58037 | gap 1, opp_overlap 2961899, overlap 2961881 2961892 2961899 CACTAATTTTTCAAA CATAAAAAAGGCCGAT TAT ATCGGCCTTTTTCA-G ATCTATCTTATAAAC TERM 3484 2961922 - 2961892 - T 100 -16.4 -3.36569 | opp_overlap 2961899, overlap 2961881 2961890 2961899 CTAATTTTTCAAACA TAAAAAAGGCCGAT TAT ATCGGCCTTTTTCA GATCTATCTTATAAA TERM 3485 2961915 - 2961899 - T 100 -12.3 -5.56264 | opp_overlap 2961899, overlap 2961892 2961890 TTCAAACATAAAAAA GGCCGAT TAT ATCGGCC TTTTTCAGATCTATC TERM 3486 2961899 - 2961915 + T 100 -12.3 -4.65838 | opp_overlap 2961899 2961892 2961890 TTCAAACATAAAAAA GGCCGAT TAT ATCGGCC TTTTTCAGATCTATC ACIAD3031 2962497 - 2961931 - | putative integral membrane resistance protein proC 2963350 - 2962514 - | pyrroline-5-carboxylate reductase TERM 3487 2963293 - 2963278 - G 74 -10.4 -2.72463 | ATCCACGCGCAATCA GCCCTC CGAT GAGGGC TTGCGCCATGTTACC mesJ 2964726 - 2963347 - | cell cycle protein TERM 3488 2963656 - 2963641 - GR 73 -9 -3.29461 | TAATTGTGGTGATAA GCCCAT TTGC ATGGGC TGAATCTGAAATACC TERM 3489 2964618 - 2964584 - GR 100 -14.4 -3.83205 | AGTTCCGACATCAAA TGCAGCAATAACATGG AAT CCATGCCACCGCTGCA TCCAATTAAGAATAC accA 2965487 - 2964663 - | acetyl-coenzyme A carboxylase carboxyl transferase (alpha subunit) TERM 3490 2964984 - 2964966 - GR 72 -8.2 -3.36762 | overlap 2964956 2964964 AGAGATCACAGAATA GATGCTGT GAG ACAACATC ACGACACGATCGGCA ppx 2967043 - 2965523 - | exopolyphosphatase (exopolypase) (metaphosphatase) TERM 3491 2966233 - 2966215 - G 88 -9.6 -4.38154 | AGACTGCGTACAAAA TTGCCAAC CCA GCTGGCAA AACTGCTCGACGATC trxA 2967309 - 2967647 + | thioredoxin TERM 3492 2967673 - 2967694 + F 100 -10.3 -5.75342 | opp_overlap 2967673 2967667 TGAATAAAATTTAAA TACGCTATT GTTC AATAGCGTA TTTTTTTTGCAGGGA TERM 3493 2967694 - 2967673 - f 93 -10.3 -3.99986 | opp_overlap 2967673, overlap 2967667 TGAATAAAATTTAAA TACGCTATT GTTC AATAGCGTA TTTTTTTTGCAGGGA TERM 3494 2967826 - 2967845 + F 71 -3 -5.0538 | gap 1, opp_overlap 2967826 CGCCGCTCGGCAACA GAAAT-TGT TTC ACATATTTC TTTTTTGAAATAACC rho 2967985 - 2969253 + | transcription termination factor Rho TERM 3495 2969294 - 2969275 - f 79 -9.3 -3.52111 | opp_overlap 2969275 TCAAAACTATCAGAA GGCTGTC TATAAC GACAGCC TTTTTCATTTGGTTG TERM 3496 2969275 - 2969294 + F 100 -9.3 -5.04222 | opp_overlap 2969275 TCAAAACTATCAGAA GGCTGTC TATAAC GACAGCC TTTTTCATTTGGTTG TERM 3497 2969459 - 2969480 + F 73 -4.5 -4.84582 | opp_overlap 2969474, overlap 2969466 CTCTTTTGATTGTTA TTTTCTGTT AAAA AACAGACAA TTTTATCTGTTTTTT TERM 3498 2969489 - 2969474 - f 70 -4 -5.00616 | opp_overlap 2969459 2969466 TTTTCTGTTAAAAAA CAGACA ATTT TATCTG TTTTTTACTTAAATT ACIAD3039 2969669 - 2969935 + | hypothetical protein TERM 3499 2969933 - 2969951 + T 71 -7.6 -3.53012 | opp_overlap 2969933 2969936, overlap 2969936 GCTGCTGCTTCTAAA TAATCTAA AAT TTAGATTA TTTGAAAAAAGAGAG TERM 3500 2969951 - 2969933 - T 71 -7.6 -3.53012 | opp_overlap 2969933 2969936, overlap 2969936 GCTGCTGCTTCTAAA TAATCTAA AAT TTAGATTA TTTGAAAAAAGAGAG TERM 3501 2969962 - 2969978 + T 100 -12.3 -5.5604 | opp_overlap 2969962 GATTATTTGAAAAAA GAGAGCC TCT GGCTCTC TTTTTTATTGCTTGC TERM 3502 2969978 - 2969962 - T 100 -12.3 -5.06451 | opp_overlap 2969962 GATTATTTGAAAAAA GAGAGCC TCT GGCTCTC TTTTTTATTGCTTGC TERM 3503 2970103 - 2970085 - T 100 -10.3 -6.4275 | opp_overlap 2970083 2970087 TAAAAACAAAAAAAA GAGCAGG TTATT CCTGCTC AGTTCCTACGCGCTG himA 2970385 - 2970092 - | integration host factor (IHF), alpha subunit, DNA-binding protein, DNA replication pheT 2972763 - 2970382 - | phenylalanyl-tRNA synthetase, beta subunit TERM 3504 2971082 - 2971063 - G 71 -2.1 -5.16572 | ACCCAACTCAAAAAA GCGAACA CGGTTT TGTTGGC GATTGAGGTTGTGTT TERM 3505 2972474 - 2972496 + g 72 -7.6 -3.90112 | opp_overlap 2972472 TCGCCAGGCAACACC GCACCAATCG TTG CGACAGGTGC TTTCATTCCCACACG pheS 2973790 - 2972798 - | phenylalanyl-tRNA synthetase, alpha-subunit TERM 3506 2973059 - 2973070 + g 75 -5.8 -4.58283 | opp_overlap 2973058 AGATGGACGGAAACG GACC TTGA GGTC TTTTTCAAAAAATTC ACIAD3043 2973918 - 2974973 + | hypothetical protein TERM 3507 2975009 - 2974986 - T 76 -9.6 -2.924 | opp_overlap 2974987, overlap 2974985 TAATCGCTTACAAAG CCTGAGATCC GTTT GGATCTCAGT TCTCATATTTATTGG TERM 3508 2974987 - 2975008 + T 95 -13.1 -3.60631 | opp_overlap 2974986 2974985 AATCGCTTACAAAGC CTGAGATCC GTTT GGATCTCAG TTCTCATATTTATTG ACIAD3044 2975222 - 2975025 - | hypothetical protein ACIAD3045 2975471 - 2975274 - | hypothetical protein TERM 3509 2975671 - 2975654 - R 100 -11.3 -5.72207 | opp_overlap 2975654 TTTAAAGCAAAAAAA GACCGCT AAAA AGCGGTC TTTTTTTGAATCTCT TERM 3510 2975654 - 2975671 + r 100 -11.3 -5.51402 | opp_overlap 2975654 TTTAAAGCAAAAAAA GACCGCT AAAA AGCGGTC TTTTTTTGAATCTCT rplT 2976050 - 2975691 - | 50S ribosomal protein L20 rpmI 2976256 - 2976062 - | 50S ribosomal protein L35 ACIAD3048 2976484 - 2977746 + | putative transporter ACIAD3049 2977863 - 2978567 + | hypothetical protein TERM 3511 2978578 - 2978608 + T 95 -12.8 -3.54424 | opp_overlap 2978569 AATAAATCTGATGGT GGATCTGAACAAAT AAA ATTTATTCAGATCC TTTAGAAGAATCCCA ACIAD3050 2979038 - 2978610 - | hypothetical protein ACIAD3051 2979761 - 2979141 - | putative glutathione S-transferase TERM 3512 2980335 - 2980347 + G 72 -7.7 -3.83154 | opp_overlap 2980334 TTTACATAAAGGGAT TGCTC GGC GAGCA TTTAAATTATCGTTA ibp 2980033 - 2980527 + | small heat-shock protein TERM 3513 2980528 - 2980575 + T 79 -9.6 -3.32963 | gap 2, opp_overlap 2980541, overlap 2980530 2980541 ATTGTGAATTCTTGA TTCA--AAGAAAAAAGGAGTGC CAATAT GCACTCCTTTTTTCTTTCTGAG TTATAAAATGGAAGT TERM 3514 2980530 - 2980571 + T 100 -16.2 -2.60079 | opp_overlap 2980541, overlap 2980528 2980541 TGTGAATTCTTGATT CAAAGAAAAAAGGAGTGC CAATAT GCACTCCTTTTTTCTTTC TGAGTTATAAAATGG TERM 3515 2980541 - 2980560 + T 100 -9.3 -5.72622 | opp_overlap 2980541, overlap 2980530 2980528 GATTCAAAGAAAAAA GGAGTGC CAATAT GCACTCC TTTTTTCTTTCTGAG TERM 3516 2980560 - 2980541 - T 100 -9.3 -5.65927 | opp_overlap 2980530 2980528 2980541 GATTCAAAGAAAAAA GGAGTGC CAATAT GCACTCC TTTTTTCTTTCTGAG TERM 3517 2980617 - 2980600 - T 93 -8.4 -5.71983 | opp_overlap 2980600, overlap 2980592 GGAAGTATAAAAAAA CGCAGC TGTTAC GCTGCG TTTTTTAGAAATGGT TERM 3518 2980600 - 2980617 + T 90 -8.4 -5.03715 | opp_overlap 2980600 2980592 GGAAGTATAAAAAAA CGCAGC TGTTAC GCTGCG TTTTTTAGAAATGGT infC 2981187 - 2980636 - | protein chain initiation factor IF-3 thrS 2983115 - 2981193 - | threonyl-tRNA synthetase TERM 3519 2982340 - 2982327 - G 71 -6.7 -4.07687 | opp_overlap 2982326 2982327 ATTGGCGTGCCAAAA CACCA TACC TGGTG CTTCTTCCTGCATAT TERM 3520 2984435 - 2984464 + G 93 -12.2 -3.64487 | opp_overlap 2984435 ATCGTGTTGAAGTGA TGGTAGCGGGTG CCGCCC CACCTGCTGCCA TTATTGAAGGTATGC ACIAD3056 2983528 - 2985171 + | acyl-CoA synthetase TERM 3521 2985228 - 2985177 - T 79 -9.6 -3.28119 | opp_overlap 2985202, overlap 2985191 ATTCACTTAGATCAA TTGACCAATAAAAAGCCAGTCCAT CGTC AGGAACTGGCTTTTTAATGTGCAA CATAGATTCAGTGCA TERM 3522 2985214 - 2985191 - T 88 -7.4 -5.14163 | opp_overlap 2985202, overlap 2985177 ATTGACCAATAAAAA GCCAGTCCAT CGTC AGGAACTGGC TTTTTAATGTGCAAC TERM 3523 2985202 - 2985214 + T 74 -5.5 -4.8048 | opp_overlap 2985191 2985177 AAAAGCCAGTCCATC GTCAG GAA CTGGC TTTTTAATGTGCAAC ACIAD3057 2985789 - 2985256 - | hypothetical protein ptsO 2986067 - 2985792 - | phosphocarrier protein (HPr-like) NPr, nitrogen related, exchanges phosphate with enzyme I ACIAD3059 2986909 - 2986058 - | hypothetical protein TERM 3524 2986107 - 2986117 + g 91 -4.6 -5.60864 | TGAATAGACCATTTT GCCT CAA GGGC TTTTTTTAGTCTATC TERM 3525 2986461 - 2986482 + g 74 -6.5 -4.44245 | opp_overlap 2986461 AGCTTAGAAAGCAAC GTGTGCTTG AGAT CGTGCACAC TTTTATCAGTGGTAT panC 2987776 - 2986931 - | pantoate--beta-alanine ligase panB 2988532 - 2987780 - | 3-methyl-2-oxobutanoate hydroxymethyltransferase TERM 3526 2988081 - 2988067 - G 75 -5.6 -4.71828 | overlap 2988068 ATTCGAGTAACAAAA TTGCGG CTC CCGCAT CAACCACCGCCTGAC TERM 3527 2988080 - 2988068 - G 73 -9.1 -3.42374 | overlap 2988067 TTCGAGTAACAAAAT TGCGG CTC CCGCA TCAACCACCGCCTGA folK 2989115 - 2988627 - | 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase) (HPPK) (6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase) (PPPK) pcnB 2990569 - 2989112 - | poly(A) polymerase I (PAP) ACIAD3064 2991080 - 2990694 - | putative DNA uptake protein and/or related DNA-binding protein mazG 2991851 - 2991084 - | nucleoside triphosphate pyrophosphohydrolase TERM 3528 2991566 - 2991550 - G 72 -8 -3.75153 | TGTTCTGAATCTAAA GCAGAG AATTG CTCTGC CTGAAATACGTGTGG ACIAD3067 2991965 - 2992747 + | short chain dehydrogenase TERM 3529 2992756 - 2992789 + T 85 -10.3 -3.46482 | opp_overlap 2992750 2992752 2992760 2992761, overlap 2992758 2992760 2992761 GTCATAAAACAGATC TAAACGTCAGCCTGC AATT GCAGGCTGACATATG TTGATTAATTGCCTT TERM 3530 2992758 - 2992787 + T 86 -10.7 -3.29727 | opp_overlap 2992750 2992752 2992760 2992761, overlap 2992756 2992760 2992761 CATAAAACAGATCTA AACGTCAGCCTGC AATT GCAGGCTGACATA TGTTGATTAATTGCC TERM 3531 2992760 - 2992785 + T 91 -13.3 -3.20896 | opp_overlap 2992750 2992752 2992760 2992761, overlap 2992758 2992756 2992761 TAAAACAGATCTAAA CGTCAGCCTGC AATT GCAGGCTGACA TATGTTGATTAATTG TERM 3532 2992785 - 2992760 - T 100 -15.5 -3.80569 | opp_overlap 2992760 2992758 2992756 2992761, overlap 2992750 2992752 2992761 TAAAACAGATCTAAA CGTCAGCCTGC AATT GCAGGCTGACA TATGTTGATTAATTG TERM 3533 2992784 - 2992761 - T 100 -16.8 -2.87257 | opp_overlap 2992761 2992760 2992758 2992756, overlap 2992760 2992750 2992752 AAAACAGATCTAAAC GTCAGCCTGC AATT GCAGGCTGAC ATATGTTGATTAATT TERM 3534 2992761 - 2992784 + T 100 -16.8 -2.51814 | opp_overlap 2992760 2992750 2992752 2992761, overlap 2992760 2992758 2992756 AAAACAGATCTAAAC GTCAGCCTGC AATT GCAGGCTGAC ATATGTTGATTAATT relA 2995100 - 2992794 - | GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase) (ppGpp synthetase I) ((p)ppGpp synthetase) TERM 3535 2993595 - 2993615 + g 75 -3.3 -5.14965 | gap 1, opp_overlap 2993595, overlap 2993596 TGAGTTGACCAACCA G-TCGCGA TTTGGT TCGCGATC TTTTTTGGTCAGAAT TERM 3536 2993596 - 2993613 + g 71 -7 -4.20707 | opp_overlap 2993595, overlap 2993595 GAGTTGACCAACCAG TCGCGA TTTGGT TCGCGA TCTTTTTTGGTCAGA TERM 3537 2994504 - 2994516 + g 76 -10.5 -3.04144 | GATGGTAAGAATTTC GCGCG CTA CGCGC TCTTGACGCTCACGC rumA 2996524 - 2995133 - | 23S rRNA 5-methyluridine methyltransferase TERM 3538 2996087 - 2996070 - G 100 -12.7 -3.65812 | TTTGCCGGAATATAA CGCACGC CTAC GCGTGCG CGACGTCGATAATCT ACIAD3070 2997357 - 2996521 - | hypothetical protein cysM 2998310 - 2997387 - | cysteine synthase B TERM 3539 3000761 - 3000749 - g 100 -6.3 -5.65496 | GATGAAAAACAAAAA CTACT CAA AGTAG GGATGGATGATTACG barA 2998466 - 3001264 + | GacS-like sensor kinase protein TERM 3540 3001274 - 3001302 + F 79 -9.8 -3.27653 | gap 1, opp_overlap 3001270, overlap 3001273 CAATAAATCTATGAC TGAGCTGT-TCTT TTTA AAGAGACAGCTCA TGTTATGCTCAGGAT ACIAD3073 3001345 - 3002133 + | enoyl-CoA hydratase TERM 3541 3002405 - 3002425 + G 70 -2.5 -4.93318 | TCATCACCTTGTACG TCCTCAACA GAT TATTGTGGA TTTTTCTAGCTTGTC ACIAD3074 3002148 - 3003023 + | putative 3-hydroxyisobutyrate dehydrogenase or 2-hydroxy-3-oxopropionate reductase hyi 3003039 - 3003836 + | hydroxypyruvate isomerase TERM 3542 3004093 - 3004128 + G 90 -10.7 -4.00445 | gap 1, opp_overlap 3004106 AAGACATTTTAGAGC TTGATGTCAGCAACAT CAGTA ATGTTGCTGACG-CAA TTATTATTGCTAGTG ACIAD3076 3004005 - 3004358 + | hypothetical protein TERM 3543 3004405 - 3004370 - T 93 -12.9 -3.39497 | gap 1, opp_overlap 3004372 3004380, overlap 3004380 CTAAAATTATAAAAG CATATAAAAAGCGACC CTCAT GGTCGCTTTTT-TATG ATTAAGATTTTGATT TERM 3544 3004372 - 3004403 + T 76 -9.7 -2.78738 | gap 1, opp_overlap 3004370 3004380, overlap 3004380 AAAATTATAAAAGCA TATAAAAAGCGACC CTCAT GGTCGCTTTTT-TA TGATTAAGATTTTGA TERM 3545 3004396 - 3004380 - T 100 -9.4 -5.07941 | opp_overlap 3004380 3004372, overlap 3004370 AAAAGCATATAAAAA GCGACC CTCAT GGTCGC TTTTTTATGATTAAG TERM 3546 3004380 - 3004396 + T 100 -9.4 -5.37345 | opp_overlap 3004370 3004380, overlap 3004372 AAAAGCATATAAAAA GCGACC CTCAT GGTCGC TTTTTTATGATTAAG ACIAD3077 3004831 - 3004463 - | hypothetical protein TERM 3547 3004593 - 3004605 + g 71 -4.1 -4.81083 | opp_overlap 3004593 AATAAACACCCTAAA CCTTG TGA TAAGG TTTTTCCTACTTCAG TERM 3548 3004682 - 3004666 - G 78 -8.7 -3.83257 | opp_overlap 3004666 3004665, overlap 3004664 3004661 AATGTAAAAAGAACA TGCCACC GTA GATGGCA GTTAGTAAAATTAAG TERM 3549 3004822 - 3004835 + g 86 -8.1 -4.68645 | opp_overlap 3004822, overlap 3004817 TCATCCGTAAAAAAA CCACC CGCA GGTGG TTTTCGTTTTAGCTC TERM 3550 3004835 - 3004822 - G 100 -8.1 -5.42259 | opp_overlap 3004822 3004817 TCATCCGTAAAAAAA CCACC CGCA GGTGG TTTTCGTTTTAGCTC pntB 3006308 - 3004854 - | pyridine nucleotide transhydrogenase, beta subunit TERM 3551 3005925 - 3005946 + g 77 -6.5 -4.63218 | overlap 3005926 TGCATGCTGAACGCC CGCAGCAGT CAAT GCTGCTTCG TTTTGTTCGAACAGA TERM 3552 3005926 - 3005942 + g 72 -8 -3.82261 | overlap 3005925 GCATGCTGAACGCCC GCAGCA GTCAA TGCTGC TTCGTTTTGTTCGAA pntA-2 3006635 - 3006321 - | pyridine nucleotide transhydrogenase (proton pump), alpha subunit (part2) pntA-1 3007774 - 3006647 - | pyridine nucleotide transhydrogenase (proton pump), alpha subunit (part1) TERM 3553 3006794 - 3006816 + g 71 -9.2 -3.01924 | ATAAAGTGCTGAAGC TTCTGTCGAC AAG GTCGATGGAA TATTGGGAACACCTA TERM 3554 3007978 - 3007958 - g 70 -2.5 -5.0432 | opp_overlap 3007953 3007958, overlap 3007953 3007959 AATAAAAATATAAAA TTGAAGGGT TTC ACTCTACAA TTTAACTATTATTTT TERM 3555 3008048 - 3008065 + G 81 -4.1 -5.33405 | gap 1, overlap 3008051 CAAACTGGTTCATTA TGC-GCGG TTT CTGCTGCA TTTTTATTTAGTACA ACIAD3081 3007958 - 3008935 + | hypothetical protein soxR 3009426 - 3008932 - | superoxide response transcriptional activator ACIAD3083 3009447 - 3009911 + | hypothetical protein TERM 3556 3011028 - 3011040 + G 73 -9.1 -3.57263 | opp_overlap 3011028 GTGGATGGGCATATA CCTGC ATG GCAGG TTTGGCACTAGCGAT ACIAD3084 3009926 - 3011122 + | MFS family transporter TERM 3557 3011427 - 3011403 - g 74 -9.3 -3.37354 | opp_overlap 3011414 TACAGCCATGGAGAA CACCCTATTGT GCT ACAACTGGGTG GCTCTAATCCCAAAG dusA 3011196 - 3012221 + | tRNA-dihydrouridine synthase A TERM 3558 3012232 - 3012260 + F 73 -4 -5.12785 | gap 1, opp_overlap 3012232 TTTGAAGAGACAAAG CCTTTATGATGCA ATCA TGAA-CATAAAGG TTTATTTTTTAATTG ACIAD3087 3012538 - 3013017 + | hypothetical protein TERM 3559 3013038 - 3013057 + T 95 -8.6 -5.60864 | opp_overlap 3013038 CGAATTTATCTAAAA CGAAGCTT ATTC AGGCTTCG TTTTTTTCATATCTA TERM 3560 3013057 - 3013038 - T 71 -6.4 -4.21275 | opp_overlap 3013038 CGAATTTATCTAAAA CGAAGCTT ATTC AGGCTTCG TTTTTTTCATATCTA ACIAD3088 3013817 - 3013044 - | putative enzyme NAD(P)-binding TERM 3561 3013218 - 3013235 + g 82 -5.6 -5.03314 | ATAAACACAGGTTAT CCCAAA TTTCTC TTTGGG TTTTTTACAAATGCC ACIAD3089 3014403 - 3013912 - | hypothetical protein TERM 3562 3014477 - 3014493 + r 73 -8 -3.53811 | opp_overlap 3014477 GCATTCAATAAAAAA GCCTCA ATAAA TGAGGC TTTAAAAGCAGTGGA TERM 3563 3014493 - 3014477 - R 93 -8 -5.4833 | opp_overlap 3014477 GCATTCAATAAAAAA GCCTCA ATAAA TGAGGC TTTAAAAGCAGTGGA acnA 3017266 - 3014513 - | aconitate hydratase TERM 3564 3015807 - 3015823 + g 100 -9.5 -4.69027 | overlap 3015813 3015815 GAGCTTTTGACCCAT GGTTTAC GTT GTAAACC TTTTTCAATGGCTTT TERM 3565 3016545 - 3016534 - G 70 -5.8 -4.24534 | opp_overlap 3016543 3016544 GAATCAACATAGAAA TGGG CTGC CCCA GCATGGCTGCTTCTG TERM 3566 3016881 - 3016854 - G 88 -10 -4.12188 | overlap 3016872 GCATCACTGGCAAAA TGATCGACCATC ACGG AATGGTCAATCA CCAAATCGACAGGTG ACIAD3091 3018204 - 3017386 - | hypothetical protein TERM 3567 3017714 - 3017729 + g 75 -10.4 -2.77222 | opp_overlap 3017714 3017712, overlap 3017713 CCACCACTAAAAGCA TGGGCG ATAC CGCCCA ATTTAAAATGATGCT TERM 3568 3017729 - 3017714 - G 77 -10.4 -3.14962 | opp_overlap 3017713 3017714, overlap 3017712 CCACCACTAAAAGCA TGGGCG ATAC CGCCCA ATTTAAAATGATGCT ACIAD3092 3019146 - 3018208 - | hypothetical protein ACIAD3093 3020052 - 3019234 - | hypothetical protein TERM 3569 3019528 - 3019561 + g 70 -3.9 -4.77438 | gap 1 GATGATGGGCTTTTT CTGCTCTCGATCTGCA ACA TGCAAATA-AGAGCGG TTTTTAATAGTCAAT TERM 3570 3020098 - 3020117 + r 100 -12.2 -5.23016 | opp_overlap 3020098 CTCTAGAATAAAAAA CAGCGTCT GTTT AGACGCTG TTTTTTACATTATTT TERM 3571 3020117 - 3020098 - R 100 -12.2 -5.55769 | opp_overlap 3020098 CTCTAGAATAAAAAA CAGCGTCT GTTT AGACGCTG TTTTTTACATTATTT prfC 3021720 - 3020131 - | peptide chain release factor 3 ACIAD3099 3024223 - 3022178 - | hypothetical protein TERM 3572 3024475 - 3024458 - R 100 -7.7 -5.97575 | opp_overlap 3024458 AAGTGATAAAAAAAA TCCTGCC AAAT GACAGGA TTTTCACTAAAGAAA ilvC 3025511 - 3024495 - | ketol-acid reductoisomerase TERM 3573 3025159 - 3025140 - G 76 -10.8 -2.70298 | overlap 3025139 3025142 TGGTGCAACCATAAT CACGTCAA GATC TTGACGTG GAACAACTTGGTTAT ilvH 3026035 - 3025544 - | acetolactate synthase 3 regulatory subunit ilvI 3027759 - 3026035 - | acetolactate synthase 3 catalytic subunit TERM 3574 3027974 - 3027952 - H 73 -9.3 -2.78679 | opp_overlap 3027952 3027954, overlap 3027951 3027954 GTTCTTGAGTCAAAT CATTTTCTC GGCTA GAGAAAATG TCTATTGCAAACCAT TERM 3575 3027952 - 3027974 + H 74 -9.3 -3.06815 | opp_overlap 3027952 3027951 3027954, overlap 3027954 GTTCTTGAGTCAAAT CATTTTCTC GGCTA GAGAAAATG TCTATTGCAAACCAT ACIAD3105 3028348 - 3028677 + | hypothetical protein TERM 3576 3029015 - 3029032 + G 70 -2.7 -4.95155 | gap 1, opp_overlap 3029009, overlap 3029016 GCGTAACTACACCAT TGGC-GAT GTG ATCAGCCG TTTTTATCGTCTCAA TERM 3577 3029847 - 3029887 + G 82 -8.4 -4.35524 | TTGATGTCTTATGGT TCAGGCGCAGTCATG-GCAG TTC CTGCACATGAC-GAGCGTGA TTTTGAGTTTGCCAA TERM 3578 3030639 - 3030625 - g 85 -4.2 -5.42862 | AGAGTGGCAAAAAAA CTTGGT TTA ACCCAG CCGATATCATTCTTG leuS 3028827 - 3031448 + | leucyl-tRNA synthetase ACIAD3107 3031476 - 3031991 + | putative minor lipoprotein ACIAD3108 3032008 - 3033003 + | DNA polymerase III subunit delta TERM 3579 3034153 - 3034135 - g 71 -4.4 -4.78107 | overlap 3034137 TAGCAGCAGTAAAAA CACCGCCG CGT CGTCGGTT GCAGCCACTCATAAA ACIAD3109 3033104 - 3034456 + | HlyD family secretion protein macB 3034456 - 3036450 + | macrolide ABC transporter ATP-binding/membrane protein ACIAD3111 3036462 - 3037856 + | putative outer membrane protein precursor TERM 3580 3037871 - 3037884 + F 75 -8.1 -3.82261 | opp_overlap 3037871, overlap 3037867 AAAGATATAAAAAAA GCCAC TACG GTGGC TTACTTTTCTTGAAC TERM 3581 3037884 - 3037871 - f 100 -8.1 -5.82281 | opp_overlap 3037867 3037871 AAAGATATAAAAAAA GCCAC TACG GTGGC TTACTTTTCTTGAAC TERM 3582 3038172 - 3038151 - f 71 -3.1 -5.09762 | opp_overlap 3038151, overlap 3038154 AGTTTAATATAAAAA TAGTTAAAA TCTT TTTAAACTA TTTATGGCAATACTT TERM 3583 3038638 - 3038628 - g 91 -5.4 -5.60993 | CTGGGCAGAAAAAAA TTGC AAT GCAA GAAATTTCCAAAAAG ACIAD3112 3038267 - 3039250 + | hypothetical protein TERM 3584 3039548 - 3039532 - g 100 -5.9 -5.7946 | overlap 3039545 TTCTGAACAAAAAAA GCAATTA CAA CAATTGC TTGAGAAAACAAAAA ACIAD3113 3039389 - 3040372 + | hypothetical protein TERM 3585 3040375 - 3040413 + T 86 -10.4 -3.69323 | opp_overlap 3040380, overlap 3040380 AGCCAATCCTTAATC ATTAACCATGTATCAGGT TAT GCCTGATGCATGGTTGGA TTTAACTCATCCTGC TERM 3586 3040408 - 3040380 - T 89 -11.8 -3.27476 | opp_overlap 3040375 3040380 ATCCTTAATCATTAA CCATGTATCAGG TTATG CCTGATGCATGG TTGGATTTAACTCAT TERM 3587 3040380 - 3040408 + T 95 -14.7 -3.29591 | opp_overlap 3040380, overlap 3040375 ATCCTTAATCATTAA CCATGTATCAGGT TAT GCCTGATGCATGG TTGGATTTAACTCAT ACIAD3114 3043397 - 3040392 - | hypothetical protein ACIAD3115 3046166 - 3043404 - | putative VGR-like protein TERM 3588 3046295 - 3046278 - R 84 -5.6 -5.4588 | opp_overlap 3046269 3046278, overlap 3046271 3046269 TAAAACTATAAAAAA TGATGC TCAAAG GCATCA TTTTTTTATTCATGG TERM 3589 3046278 - 3046295 + r 95 -6.3 -5.84381 | opp_overlap 3046278 3046271 3046269, overlap 3046269 TAAAACTATAAAAAA TGATGCT CAAA GGCATCA TTTTTTTATTCATGG fabI 3047198 - 3046323 - | NADH-dependent enoyl-ACP reductase TERM 3590 3047244 - 3047223 - R 100 -9.5 -5.77988 | ATAGACATAAAAAAA TCGCACTCT CTAA AGAATGCGA TTGAGGCTATTTGGG ACIAD3117 3048001 - 3047270 - | hypothetical protein TERM 3591 3047556 - 3047539 - G 71 -4.1 -4.91109 | TTTGCACCACAAAAA CAATCGC AATT GCAATCG TGGCAGAAATCACTA orn 3048774 - 3048223 - | oligoribonuclease TERM 3592 3048331 - 3048345 + g 70 -5.6 -4.40037 | overlap 3048333 TAAGCCACTCATGAT CTCTGG ACG CCAGCG TTTTGCTAATTCTTT ACIAD3119 3048897 - 3049955 + | putative GTPase TERM 3593 3049980 - 3049997 + F 71 -8.5 -3.00498 | opp_overlap 3049968 3049967 AACTAGCTCTTGAAC TGGTGAT TTTG ATCACCA TGTATATGAGCTATA TERM 3594 3050070 - 3050082 + G 89 -6.2 -5.33405 | opp_overlap 3050069 TTGGTTGGAATTTAT GGGG AATCA CCCC TTTTTATTTGGTACG TERM 3595 3050102 - 3050113 + G 78 -4.4 -5.10765 | TATTTGGTACGCTTG CGAT TCTG ATCG TTTTGTTCTTTATTT ACIAD3120 3050026 - 3050463 + | hypothetical protein grx 3050476 - 3050733 + | glutaredoxin secB 3050763 - 3051218 + | preprotein translocase subunit SecB TERM 3596 3051243 - 3051261 + T 100 -8.9 -5.86465 | opp_overlap 3051243 TCTCCTACTTAAAAA GCTACCT CTCAA AGGTAGC TTTTTTTATATTGTT TERM 3597 3051261 - 3051243 - T 100 -9.6 -4.65895 | opp_overlap 3051243 TCTCCTACTTAAAAA GCTACCTC TCA AAGGTAGC TTTTTTTATATTGTT ACIAD3123 3051691 - 3051278 - | putative precursor of cytochrome b(562) (CybC) TERM 3598 3051757 - 3051730 - R 88 -7.9 -5.00616 | gap 1, opp_overlap 3051736, overlap 3051732 3051736 TGGTTTCTCAAAAAA CATAAAGCTCCT TTTTC AGGAGCTTTA-G CTAAACAATATAACT TERM 3599 3051756 - 3051732 - R 100 -11.6 -4.13561 | opp_overlap 3051736, overlap 3051730 3051736 GTTTCTCAAAAAACA TAAAGCTCCT TTTTC AGGAGCTTTA GCTAAACAATATAAC TERM 3600 3051736 - 3051752 + r 73 -8 -3.6502 | opp_overlap 3051732 3051730 3051736 CTCAAAAAACATAAA GCTCCT TTTTC AGGAGC TTTAGCTAAACAATA TERM 3601 3051752 - 3051736 - R 86 -8 -4.64992 | opp_overlap 3051736, overlap 3051732 3051730 CTCAAAAAACATAAA GCTCCT TTTTC AGGAGC TTTAGCTAAACAATA dfp 3053060 - 3051780 - | bifunctional 4'-phosphopantothenoylcysteine decarboxylase/phosphopantothenoylcysteine synthetase radC 3053102 - 3053917 + | DNA repair protein, associated with replication forks ACIAD3127 3053914 - 3054825 + | hypothetical protein ACIAD3128 3055904 - 3054846 - | putative oxidoreductase TERM 3602 3055174 - 3055192 + g 72 -9.6 -3.16668 | overlap 3055163 GGAGGTGCATATTGC GCTGTTTG ATG CAAACGGC TTGATGCGGGTATTG TERM 3603 3055967 - 3055985 + H 70 -4.6 -4.81852 | opp_overlap 3055959 3055967 AAAAAAGCAGGATAA TCAGAAAA GAC TATTCTGA TTTTATTGATTATGA ACIAD3129 3055982 - 3056911 + | LysR family transcriptional regulator TERM 3604 3057524 - 3057512 - g 75 -3.4 -5.21683 | ACTTAAAAAAACAAA TGCA TATGT TGCA GGCACAGATTTTTCA ACIAD3130 3057063 - 3057686 + | putative glutathione S-transferase ACIAD3131 3058551 - 3057700 - | phosphoesterase TERM 3605 3057987 - 3057953 - Gf 71 -7.8 -3.65986 | opp_overlap 3057954 3057959, overlap 3057947 3057954 GAGGATAAATCATAA CGTGTAGGATGCGCCA AGA TGGCAAATCCTTCACT CTCATGAATAATCCG TERM 3606 3057954 - 3057986 + gF 73 -9.1 -2.81464 | opp_overlap 3057953 3057947 3057954, overlap 3057959 AGGATAAATCATAAC GTGTAGGATGCGCCA AGA TGGCAAATCCTTCAC TCTCATGAATAATCC TERM 3607 3057986 - 3057954 - Gf 83 -11.3 -2.78869 | opp_overlap 3057954 3057959, overlap 3057953 3057947 AGGATAAATCATAAC GTGTAGGATGCGCCA AGA TGGCAAATCCTTCAC TCTCATGAATAATCC TERM 3608 3059136 - 3059148 + GH 80 -6.3 -4.71708 | overlap 3059133 TACTGCTTTTGGTGA CATGA TTG TCATG TTTTCCTTTATTATT ACIAD3132 3058546 - 3059211 + | putative intracellular septation protein (IspZ) ACIAD3133 3059244 - 3059546 + | YciI-like protein TERM 3609 3059918 - 3059932 + G 76 -10 -3.34104 | TGTTTCTGTACGGCG CTGCGA CAC TCGCAG TTGGTGTGGTTCTGG ACIAD3134 3059674 - 3059997 + | hypothetical protein ACIAD3135 3060030 - 3061901 + | hypothetical protein TERM 3610 3061929 - 3061942 + T 100 -9.5 -4.81851 | opp_overlap 3061929 TTCCATTCAAAAAAA GCGCC CGAA GGCGC TTTTTGAGTTTAGCT TERM 3611 3061942 - 3061929 - T 100 -9.5 -5.47218 | opp_overlap 3061929 TTCCATTCAAAAAAA GCGCC CGAA GGCGC TTTTTGAGTTTAGCT ACIAD3136 3062290 - 3061952 - | putative rhodanese-like sulfurtransferase TERM 3612 3062029 - 3062014 - G 79 -7.6 -4.2558 | TACCTCCCATCAAAA TCACGT ATTC ACGTGA ACCGTCCAACTCTTC ACIAD3137 3062358 - 3062846 + | nucleotide-binding protein ACIAD3138 3062850 - 3063374 + | hypothetical protein TERM 3613 3063439 - 3063402 - T 74 -3.3 -5.37593 | opp_overlap 3063408, overlap 3063404 TCTGAAAGTAAAAAA TATACAGGCGACCTAGC ATGT ACTGGGGAGCCTGTATG ACTAATCCTGATCTC TERM 3614 3063437 - 3063404 - T 72 -5.9 -4.31698 | opp_overlap 3063408, overlap 3063402 TGAAAGTAAAAAATA TACAGGCGACCTAGC ATGT ACTGGGGAGCCTGTA TGACTAATCCTGATC ACIAD3139 3063902 - 3063483 - | hypothetical protein thi3 3064341 - 3063916 - | thioredoxin C-3 ACIAD3141 3065239 - 3064343 - | hypothetical protein ACIAD3142 3065311 - 3065700 + | putative sulfide dehydrogenase (flavocytochrome C) TERM 3615 3065976 - 3065943 - g 100 -16.3 -4.30014 | CTGAGCAAGCCAAAA TTAGCTTGATCTACC AACC GATAGATCAAGCTAA AAATGCACAGACCGA ACIAD3143 3065756 - 3066115 + | hypothetical protein TERM 3616 3066231 - 3066261 + T 72 -9.3 -2.76272 | gap 1, opp_overlap 3066231 3066238, overlap 3066238 AGAACACGATGAAAA TAAAAAA-TGACGC CGAG GCGTCATTTTTTTA TGATCTAATTTCTTT TERM 3617 3066260 - 3066231 - T 100 -10.9 -4.36063 | opp_overlap 3066231 3066238, overlap 3066238 AGAACACGATGAAAA TAAAAAATGACGC CGAG GCGTCATTTTTTT ATGATCTAATTTCTT TERM 3618 3066253 - 3066238 - T 100 -9 -5.83211 | opp_overlap 3066231 3066238, overlap 3066231 GATGAAAATAAAAAA TGACGC CGAG GCGTCA TTTTTTTATGATCTA TERM 3619 3066238 - 3066253 + T 95 -9 -5.69473 | opp_overlap 3066238 3066231, overlap 3066231 GATGAAAATAAAAAA TGACGC CGAG GCGTCA TTTTTTTATGATCTA ACIAD3144 3068213 - 3066282 - | hypothetical protein TERM 3620 3066384 - 3066396 + g 74 -7.7 -4.0274 | opp_overlap 3066384 ACTATAACGATAAAA CGTAC TTT GTACG TTGTTTGCTACTGGC TERM 3621 3066396 - 3066384 - G 86 -7.7 -4.59069 | opp_overlap 3066384 ACTATAACGATAAAA CGTAC TTT GTACG TTGTTTGCTACTGGC ACIAD3145 3068356 - 3069744 + | dihydrolipoamide dehydrogenase ACIAD3146 3069846 - 3070895 + | putative phosphorylase family protein TERM 3622 3070910 - 3070941 + T 100 -15.4 -4.06964 | opp_overlap 3070920, overlap 3070912 3070920 ATCTTTATTTAACCG TAGTAAAAAAGGGC ATAA GCCCTTTTTTACTG TTTAGTTCTATGTGT TERM 3623 3070912 - 3070939 + T 100 -15.8 -3.617 | opp_overlap 3070920, overlap 3070910 3070920 CTTTATTTAACCGTA GTAAAAAAGGGC ATAA GCCCTTTTTTAC TGTTTAGTTCTATGT TERM 3624 3070920 - 3070931 + T 89 -7.2 -5.32699 | opp_overlap 3070920, overlap 3070912 3070910 AACCGTAGTAAAAAA GGGC ATAA GCCC TTTTTTACTGTTTAG TERM 3625 3070931 - 3070920 - T 88 -7.2 -5.16237 | opp_overlap 3070920 3070912 3070910 AACCGTAGTAAAAAA GGGC ATAA GCCC TTTTTTACTGTTTAG TERM 3626 3071011 - 3071035 + T 100 -14.2 -4.00532 | opp_overlap 3071011 TTCTGCATAAAAAAA GCCCCCTGGC GTTTG GCCTGGGGGC TTTAGTATTTAAAAG TERM 3627 3071035 - 3071011 - T 100 -14.2 -5.60993 | opp_overlap 3071011 TTCTGCATAAAAAAA GCCCCCTGGC GTTTG GCCTGGGGGC TTTAGTATTTAAAAG TERM 3628 3072968 - 3072982 + T 80 -7.1 -4.56607 | overlap 3072961 TGGTCTTTCGGCGAA CGGGT TTTTC ACCCG TTTTGTCGTTACTCA TERM 3629 3073760 - 3073772 + T 89 -9.1 -4.2354 | AGGATCTATTTCACT CCCCT CAC AGGGG TTCTTTTCGCCTTTC TERM 3630 3074547 - 3074532 - T 73 -7.6 -3.8766 | overlap 3074542 TCAGATCACACTAAA CTGTGA TAAA TCACAG AGGTTAATAAACTTT TERM 3631 3074651 - 3074667 + T 72 -9.5 -2.7676 | opp_overlap 3074644 TGCTTAAATTTCAAG GAAAAGC GTT GCTTTTC TGCTCTTGAAATTTG TERM 3632 3074826 - 3074842 + T 81 -10.9 -2.62396 | overlap 3074818 3074828 TTGAACTTGTGACCC CACGCTT ATC AAGCGTG TGCTCTAACCAACTG TERM 3633 3074945 - 3074964 + T 72 -9.2 -2.65808 | opp_overlap 3074936, overlap 3074942 TAAGGAGGTGATCCA GCCGCAGG TTCC CCTACGGC TACCTTGTTACGACT TERM 3634 3076773 - 3076788 + T 81 -6.2 -4.99035 | opp_overlap 3076772 CAATCTAGCCAAACC CTTGTT TATC AACAAG TTTTTATCTGCATCA ACIAD3148 3077985 - 3076909 - | hypothetical protein pssA 3078835 - 3078002 - | phosphatidylserine synthase ACIAD3150 3079734 - 3078877 - | hypothetical protein TERM 3635 3079081 - 3079091 + g 74 -4 -5.07652 | CTGGCGACGAATACC TGTT TTA AACA TTTTCTTTTCGAAAC TERM 3636 3079231 - 3079208 - G 74 -6.8 -4.31379 | overlap 3079199 ACCAACTGAGGAAAA TCCTTACG CTCAAGTT CGTAAGGA GGATCAATCATGACC TERM 3637 3079305 - 3079320 + g 80 -9 -4.06148 | CATAAGCATCACGCT CGTGCA ATCC TGCACG TTTGTCTCGAATATT ACIAD3151 3079847 - 3080455 + | hypothetical protein TERM 3638 3081000 - 3081039 + G 75 -8.9 -3.64682 | gap 3, overlap 3081004 3081005 TCTGGATTTACTTCA CCAGCATCCAGCTTTC-GAT AAC ATCAGAAAGCTGGA--CTGG TTTAAAACTTTAGTA TERM 3639 3081004 - 3081038 + G 75 -10.3 -2.78327 | gap 2, overlap 3081000 3081005 GATTTACTTCACCAG CA-TCCAGCTTTC-GAT AAC ATCAGAAAGCTGGACTG GTTTAAAACTTTAGT TERM 3640 3081005 - 3081036 + G 71 -9.6 -2.93381 | gap 1, overlap 3081004 3081000 ATTTACTTCACCAGC ATCCAGCTTTC-GAT AAC ATCAGAAAGCTGGAC TGGTTTAAAACTTTA ACIAD3152 3080545 - 3081072 + | hypothetical protein TERM 3641 3081095 - 3081117 + T 72 -9.2 -2.62983 | TGTCTATGATGCAGC GTCCTGAAAT TAA ACTTCAGGAC TACTGTCAACATGCA ACIAD3153 3081352 - 3081104 - | hypothetical protein TERM 3642 3081493 - 3081512 + r 91 -12.2 -3.77831 | opp_overlap 3081493 TATTGGATAAAAAAA GGCACTTC ATTT GAAGTGCC TTTCCATCTTCATCA TERM 3643 3081512 - 3081493 - R 100 -12.2 -5.626 | opp_overlap 3081493 TATTGGATAAAAAAA GGCACTTC ATTT GAAGTGCC TTTCCATCTTCATCA mdh 3082521 - 3081535 - | malate dehydrogenase TERM 3644 3082247 - 3082216 - G 70 -7.9 -3.63694 | ATTTACTTTCAATAA GTCAGCGCGTTCC ATGCCA GGACCACGCGGAC GAGAACCCACAAGTA ACIAD3156 3083420 - 3082701 - | hypothetical protein TERM 3645 3082935 - 3082945 + g 73 -5.4 -4.59109 | AATAGGCCCCGTCAA TTCC GCA GGAA TTTTTAAGCGATCTG ACIAD3157 3085443 - 3083401 - | putative lytic murein transglycosylase, soluble (Slt) TERM 3646 3085848 - 3085836 - g 79 -7.7 -4.24602 | opp_overlap 3085837, overlap 3085833 ACAGACCCAAAAGAA GCAGA TAT TCTGC TCATGAATACCTGTT ACIAD3158 3085632 - 3087083 + | putative tRNA-i(6)A37 modification enzyme (MiaB) phoL 3087124 - 3088206 + | phosphate starvation-inducible protein (PhoH-like) TERM 3647 3088278 - 3088237 - f 70 -4.5 -4.65916 | gap 1, opp_overlap 3088246 3088248, overlap 3088245 3088248 TTCACTTTAATAAAA CACTTAAATCAGGGGATTGC CAT GCACTCCCCT-ATTTTTATG AAGGATCAGGTTTGA TERM 3648 3088271 - 3088245 - f 70 -7.2 -3.87694 | opp_overlap 3088246 3088248, overlap 3088237 3088248 AATAAAACACTTAAA TCAGGGGATTGC CAT GCACTCCCCTAT TTTTATGAAGGATCA TERM 3649 3088246 - 3088270 + F 95 -8.5 -4.83615 | opp_overlap 3088245 3088237 3088248, overlap 3088248 ATAAAACACTTAAAT CAGGGGATTGC CAT GCACTCCCCTA TTTTTATGAAGGATC TERM 3650 3088248 - 3088268 + F 93 -11.1 -4.03995 | opp_overlap 3088245 3088237 3088248, overlap 3088246 AAAACACTTAAATCA GGGGATTGC CAT GCACTCCCC TATTTTTATGAAGGA TERM 3651 3088268 - 3088248 - f 83 -11.1 -2.99074 | opp_overlap 3088248 3088246, overlap 3088245 3088237 AAAACACTTAAATCA GGGGATTGC CAT GCACTCCCC TATTTTTATGAAGGA ACIAD3160 3088290 - 3088769 + | hypothetical protein TERM 3652 3088812 - 3088772 - T 100 -9.9 -5.00467 | opp_overlap 3088776, overlap 3088776 TCAAGAACAATAAAA CAAAGAGCCAATGAGCA ATTGCTG TGATCATTGGCTCTTTT TTAGAAATGATATCT TERM 3653 3088776 - 3088808 + T 100 -10.7 -5.03715 | opp_overlap 3088772 3088776 GAACAATAAAACAAA GAGCCAATGAGCA ATTGCTG TGATCATTGGCTC TTTTTTAGAAATGAT TERM 3654 3088808 - 3088776 - T 100 -10.7 -4.96427 | opp_overlap 3088776, overlap 3088772 GAACAATAAAACAAA GAGCCAATGAGCA ATTGCTG TGATCATTGGCTC TTTTTTAGAAATGAT ACIAD3161 3090969 - 3088813 - | putative outer membrane porin, receptor for Fe(III)-coprogen, Fe(III)-ferrioxamine B and Fe(III)-rhodotrulic acid uptake (fhuE) TERM 3655 3089565 - 3089584 + g 84 -3.6 -5.55664 | overlap 3089566 GATCATATTCAATCG TCTTCTTT TTTA AAGGAAGG TTTTTTTCATACTGC ACIAD3162 3091445 - 3092143 + | hypothetical protein ACIAD3163 3092263 - 3093015 + | hypothetical protein TERM 3656 3093099 - 3093043 - f 79 -5.3 -5.17054 | opp_overlap 3093046, overlap 3093044 3093045 ACAACACCCAAAAAA CTCTGCAAGCCCAAATTGACTAAAT GATAAAT ATTTTGTCAATTTTGGCTTGCATTT TTTTATATGCTTTTT TERM 3657 3093098 - 3093044 - f 77 -8.8 -3.68606 | opp_overlap 3093046, overlap 3093043 3093045 CAACACCCAAAAAAC TCTGCAAGCCCAAATTGACTAAAT GATAAAT ATTTTGTCAATTTTGGCTTGCATT TTTTTATATGCTTTT TERM 3658 3093097 - 3093045 - f 86 -12.3 -2.80079 | opp_overlap 3093046, overlap 3093044 3093043 AACACCCAAAAAACT CTGCAAGCCCAAATTGACTAAAT GATAAAT ATTTTGTCAATTTTGGCTTGCAT TTTTTTATATGCTTT TERM 3659 3093046 - 3093096 + F 100 -16.5 -5.75478 | opp_overlap 3093045 3093044 3093043 ACACCCAAAAAACTC TGCAAGCCCAAATTGACTAAATG ATAAA TATTTTGTCAATTTTGGCTTGCA TTTTTTTATATGCTT xpt 3093162 - 3093737 + | xanthine phosphoribosyltransferase TERM 3660 3093761 - 3093784 + F 84 -8.2 -4.59027 | opp_overlap 3093767, overlap 3093767 TGTTCAATTATATTT TTAAAAGCGC TACG GCGCTTTTTA TTTTGTCTGATCATT TERM 3661 3093778 - 3093767 - f 75 -7.2 -4.13282 | opp_overlap 3093761 3093767 ATTATATTTTTAAAA GCGC TACG GCGC TTTTTATTTTGTCTG TERM 3662 3093767 - 3093778 + F 93 -7.2 -5.58522 | opp_overlap 3093767, overlap 3093761 ATTATATTTTTAAAA GCGC TACG GCGC TTTTTATTTTGTCTG ACIAD3165 3093861 - 3094289 + | hypothetical protein TERM 3663 3094350 - 3094310 - T 73 -8.5 -3.15621 | opp_overlap 3094314, overlap 3094308 AAGCTCAATTTAATA TTCTTTCTAGGATCTTATT TAA AATAAGCTCCTAGAATTAA ATCAACGGCGAAATA TERM 3664 3094314 - 3094346 + T 90 -13.7 -3.05384 | opp_overlap 3094310 3094308 TCAATTTAATATTCT TTCTAGGATCTTATT TAA AATAAGCTCCTAGAA TTAAATCAACGGCGA ACIAD3166 3094982 - 3094347 - | putative amino-acid efflux transmembrane protein TERM 3665 3094872 - 3094852 - G 83 -11.1 -3.54638 | overlap 3094867 ACAATGGTTTTGAAA GCAGCTTGG TAA CCATGCTGC AACCCAACACTTGCA wrbA 3095650 - 3095051 - | tryptophan repressor binding protein TERM 3666 3095575 - 3095592 + g 80 -3.5 -5.36441 | gap 1 CAGACTCGATACCAT TGGCA-AT CAA ATGTGCCA TTTTTTGTGTAGAGC TERM 3667 3096063 - 3096051 - g 74 -4.1 -4.99035 | TCATTTACAGAAAAA TCAAG CAA CCTGA CTGTTATTGGTATTT TERM 3668 3096430 - 3096448 + G 71 -9 -3.32293 | overlap 3096428 3096426 GCTTTAGCGCTGCCA TTTTTGAG TTG CTCAAAAA TATCTTTGGCTTTGC ACIAD3168 3095748 - 3097007 + | putative ribonuclease (Rbn) TERM 3669 3097020 - 3097041 + T 100 -10.2 -5.14563 | TAATTTAAACTCTAA GGCCTGAT CAGATC ATCAGGCC TTTTTTAGTACAACG ACIAD3169 3097979 - 3097068 - | LysR family transcriptional regulator ACIAD3170 3098112 - 3099398 + | MFS family transporter ACIAD3172 3100306 - 3099662 - | putative fumarylacetoacetate hydrolase family protein TERM 3670 3100145 - 3100134 - G 70 -5.8 -4.24606 | opp_overlap 3100132 3100134 3100141 AACTCACACTCAAAA TGGC AACT GCCA TGTTTGGTATTCCAT ACIAD3173 3100886 - 3100338 - | hypothetical protein TERM 3671 3102212 - 3102227 + G 71 -3.2 -5.06816 | opp_overlap 3102212 CAGTGCAGCGAAAAT TGATGC AAAA GCACCA TTTTTATTGCGCGCT ACIAD3174 3101025 - 3102329 + | hypothetical protein TERM 3672 3102384 - 3102368 - T 100 -9.5 -5.64274 | opp_overlap 3102368 TTAGGCACAAAAAAA CCACTTA CAA TAAGTGG TTTCTTTTCAACTCT TERM 3673 3102368 - 3102384 + T 100 -9.5 -4.67651 | opp_overlap 3102368 TTAGGCACAAAAAAA CCACTTA CAA TAAGTGG TTTCTTTTCAACTCT ACIAD3175 3102866 - 3102585 - | hypothetical protein TERM 3674 3103203 - 3103217 + r 71 -8.6 -2.97653 | opp_overlap 3103203 3103202, overlap 3103202 CAATATTTTTAAAAT CTGCAT TTA ATGCAG CTTTATAATCAACAT TERM 3675 3103217 - 3103203 - R 71 -8.6 -3.08201 | opp_overlap 3103202 3103203, overlap 3103202 CAATATTTTTAAAAT CTGCAT TTA ATGCAG CTTTATAATCAACAT ACIAD3176 3104442 - 3103183 - | putative sensory transduction histidine kinase TERM 3676 3103595 - 3103609 + g 100 -7.2 -6.02914 | opp_overlap 3103595 3103597 TCAGTCTCGATATCA CATTCA ATT TGAATG TTTTTTTTCTGTGCA TERM 3677 3105368 - 3105356 - g 79 -3.4 -5.29445 | CTTCAACAATAAAAA CCAT TATCG ATGG CTTAACAGACAATTT ACIAD3177 3105181 - 3107250 + | hypothetical protein TERM 3678 3107294 - 3107269 - f 100 -11.9 -4.33928 | opp_overlap 3107269 CACCCTAAACACAAA CGCCGTCTATA TGAA TGTAGACGGCG TTTTATATGCTTAAT TERM 3679 3107269 - 3107294 + F 100 -14.1 -4.62002 | opp_overlap 3107269 CACCCTAAACACAAA CGCCGTCTATA TGAA TGTAGACGGCG TTTTATATGCTTAAT TERM 3680 3107404 - 3107417 + F 79 -8.1 -3.9344 | opp_overlap 3107404 ACAAGCACAAAAAAA CCGCT ATTA AGCGG TTTAATGTTCAAGTT TERM 3681 3107417 - 3107404 - f 93 -8.1 -5.73339 | opp_overlap 3107404 ACAAGCACAAAAAAA CCGCT ATTA AGCGG TTTAATGTTCAAGTT TERM 3682 3109227 - 3109208 - g 71 -3 -4.95155 | TCCAGATGATAAAAA TATTCAAA AGTC TTTAAATA CGCTATTCCAACTCT TERM 3683 3110361 - 3110322 - g 80 -2.9 -5.4477 | gap 1 AAATCGGCAAAAAAA TCTTCTCCTGCATCGGTC AGTAA GCCCG-TAAAAGAGAAGA AAAAAGTCAAAGTTA rnr 3107961 - 3110414 + | exoribonuclease R TERM 3684 3110459 - 3110485 + F 100 -10.3 -5.14645 | opp_overlap 3110458 ATTTAAAGAGATGAC TGCCGTTTAAT CATGA ATTAGACGGCA TTTTTATTAAGTTAT prlC 3110802 - 3112856 + | oligopeptidase A ACIAD3183 3112862 - 3113101 + | hypothetical protein TERM 3685 3113105 - 3113134 + T 100 -15.3 -2.83343 | opp_overlap 3113105 3113113, overlap 3113113 TCTAAATCATAAAAA TAAAAAAAGCACC TTTG GGTGCTTTTTTTA TATCGTAATCGCTAT TERM 3686 3113134 - 3113105 - T 100 -15.3 -5.04325 | opp_overlap 3113105 3113113, overlap 3113113 TCTAAATCATAAAAA TAAAAAAAGCACC TTTG GGTGCTTTTTTTA TATCGTAATCGCTAT TERM 3687 3113113 - 3113126 + T 93 -8.1 -5.74122 | opp_overlap 3113105 3113113, overlap 3113105 ATAAAAATAAAAAAA GCACC TTTG GGTGC TTTTTTTATATCGTA TERM 3688 3113126 - 3113113 - T 100 -8.1 -6.23317 | opp_overlap 3113113 3113105, overlap 3113105 ATAAAAATAAAAAAA GCACC TTTG GGTGC TTTTTTTATATCGTA ACIAD3184 3115422 - 3113146 - | putative integral membrane protein, transporter ACIAD3185 3116085 - 3115504 - | hypothetical protein TERM 3689 3116146 - 3116162 + r 76 -3.7 -5.29208 | overlap 3116142 GATGATTTTATGAGC GTAAAAC TAT GTTCTAC TTTATTTTTTATTTT ACIAD3186 3117256 - 3116171 - | hypothetical protein TERM 3690 3117236 - 3117220 - G 71 -8.7 -3.32647 | opp_overlap 3117219 TTGTAATCACAGCAA CGGTCAA TCC TCGACCG AGTTTTAGCAAATTC TERM 3691 3117339 - 3117328 - R 70 -4.4 -4.65916 | opp_overlap 3117328 3117331, overlap 3117331 GTTATTCCAATAAAA GAGT AATT ACTC TAATTATAGTTTTAT TERM 3692 3117454 - 3117425 - R 91 -5.2 -5.81412 | gap 2, opp_overlap 3117425 TTTAGGCAAAAAAAA GTAGCAT-TGC-GA CGGT TCAGCACATGCTAC TTATAAACTGGTAAA ACIAD3187 3117684 - 3117472 - | hypothetical protein TERM 3693 3117677 - 3117667 - G 81 -4 -5.37345 | opp_overlap 3117667 TTGAATCAGAAAAAA TTGT CCA ACAA TTCTCATTTTTTAAT ACIAD3188 3118195 - 3117803 - | hypothetical protein TERM 3694 3118002 - 3118014 + g 77 -4.9 -4.96646 | TTTTGGTCAAGCTGT TCAAT GGT ATTGA TTTTTGGTTGTCTAC ACIAD3189 3118439 - 3118182 - | hypothetical protein fadE 3118628 - 3119800 + | acyl coenzyme A dehydrogenase TERM 3695 3119827 - 3119845 + T 100 -8.9 -5.96894 | opp_overlap 3119827 TCATAAACAAAAAAA GGAGCTT TGTTT AAGCTCC TTTTTTTGTTTAGCT TERM 3696 3119845 - 3119827 - T 100 -8.9 -6.02919 | opp_overlap 3119827 TCATAAACAAAAAAA GGAGCTT TGTTT AAGCTCC TTTTTTTGTTTAGCT TERM 3697 3119859 - 3119882 + T 84 -6.8 -5.09259 | CCTTTTTTTGTTTAG CTCAAGTTAG GATA CTAATTTGGG TTTTGTTTTACGCTC ACIAD3192 3121361 - 3119865 - | flavin-binding family monooxygenase TERM 3698 3121490 - 3121508 + r 95 -8.9 -4.87665 | opp_overlap 3121490 3121507, overlap 3121507 ACAGGCATAAAAAAA GATCGGT ATTAA ACCGATC TTTTTCTGAATAAGA TERM 3699 3121508 - 3121490 - R 95 -8.9 -5.65177 | opp_overlap 3121490 3121507, overlap 3121507 ACAGGCATAAAAAAA GATCGGT ATTAA ACCGATC TTTTTCTGAATAAGA rplQ 3121904 - 3121527 - | 50S ribosomal protein L17 rpoA 3122930 - 3121923 - | DNA-directed RNA polymerase subunit alpha TERM 3700 3122267 - 3122249 - G 75 -3.2 -5.19251 | GAAGATCAACAAAAA TTGCAA TTTGTTG TTGCAA GATTGTTGCCGCTTT rpsD 3123572 - 3122949 - | 30S ribosomal protein S4 TERM 3701 3123375 - 3123389 + g 84 -2.8 -5.61881 | opp_overlap 3123373 3123371 ACGCTCTAACACACC GTACAT ACG ACGTAC TTTTTGTTTTTCACG TERM 3702 3123455 - 3123470 + g 87 -4.6 -5.46698 | overlap 3123437 CTTGGCCATGTTGAC CAGGCG CTTT CGCATG TTTTTTAGTTTTGAC rpsK 3123971 - 3123585 - | 30S ribosomal protein S11 rpsM 3124347 - 3123991 - | 30S ribosomal protein S13 TERM 3703 3124384 - 3124364 - R 82 -7.5 -4.57073 | opp_overlap 3124379, overlap 3124376 3124380 CACTTTCTCCAAAAA GGCAGTAGA TAA TCAACCGCC CCACAAAAAATCTTT TERM 3704 3124412 - 3124376 - R 71 -7.9 -3.56562 | opp_overlap 3124379, overlap 3124364 3124380 AAAGGCAGTAGATAA TCAACCGCCCCACAAAA AAT CTTTGAGGGGCGGATAT TAACCTAATTAGCCT TERM 3705 3124379 - 3124409 + r 83 -11.1 -3.08015 | opp_overlap 3124364 3124376 3124380 GGCAGTAGATAATCA ACCGCCCCACAAA AAATC TTTGAGGGGCGGA TATTAACCTAATTAG TERM 3706 3124408 - 3124380 - R 100 -15.3 -3.51076 | opp_overlap 3124379, overlap 3124364 3124376 GCAGTAGATAATCAA CCGCCCCACAAAA AAT CTTTGAGGGGCGG ATATTAACCTAATTA rpmJ 3124570 - 3124454 - | 50S ribosomal protein L36 secY 3125949 - 3124591 - | preprotein translocase subunit SecY rplO 3126396 - 3125956 - | 50S ribosomal protein L15 rpmD 3126576 - 3126400 - | 50S ribosomal protein L30 rpsE 3127080 - 3126583 - | 30S ribosomal protein S5 rplR 3127433 - 3127083 - | 50S ribosomal protein L18 rplF 3127981 - 3127448 - | 50S ribosomal protein L6 rpsH 3128390 - 3127995 - | 30S ribosomal protein S8 TERM 3707 3128307 - 3128335 + g 80 -8.9 -3.97368 | opp_overlap 3128306 3128305 TTTTAACTTAGAACT TGGCATAGAAACA GTT TGTTTCTTCGCCA TTTGTGCGTTACGAA rpsN 3128708 - 3128403 - | 30S ribosomal protein S14 rplE 3129254 - 3128718 - | 50S ribosomal protein L5 rplX 3129590 - 3129270 - | 50S ribosomal protein L24 TERM 3708 3129549 - 3129572 + g 84 -5.2 -5.27779 | overlap 3129550 GCCTTTTTCTTTACC TGCGATCACG ATAA CCTGATCGCC TTTTTTAATCTTAGC TERM 3709 3129550 - 3129571 + g 78 -8.7 -3.75583 | overlap 3129549 CCTTTTTCTTTACCT GCGATCACG ATAA CCTGATCGC CTTTTTTAATCTTAG rplN 3129968 - 3129600 - | 50S ribosomal protein L14 rpsQ 3130316 - 3130059 - | 30S ribosomal protein S17 rpmC 3130510 - 3130313 - | 50S ribosomal protein L29 rplP 3130923 - 3130510 - | 50S ribosomal protein L16 rpsC 3131679 - 3130927 - | 30S ribosomal protein S3 rplV 3132013 - 3131681 - | 50S ribosomal protein L22 rpsS 3132297 - 3132022 - | 30S ribosomal protein S19 rplB 3133135 - 3132311 - | 50S ribosomal protein L2 rplW 3133467 - 3133147 - | 50S ribosomal protein L23 rplD 3134081 - 3133464 - | 50S ribosomal protein L4 rplC 3134716 - 3134078 - | 50S ribosomal protein L3 TERM 3710 3134770 - 3134736 - R 83 -5.8 -5.055 | overlap 3134737 GTAACCTCTAAAAAA GCAGCTTAATTAATGC CAG GCACTAATTAACCCGA AAGCCTTAACCCAAT TERM 3711 3134769 - 3134737 - R 80 -9.3 -3.62577 | overlap 3134736 TAACCTCTAAAAAAG CAGCTTAATTAATGC CAG GCACTAATTAACCCG AAAGCCTTAACCCAA rpsJ 3135102 - 3134776 - | 30S ribosomal protein S10 ACIAD3221 3136091 - 3135351 - | putative glutamine amidotransferase ACIAD3222 3136252 - 3137445 + | putative cystathionine beta-lyase, PLP-dependent (beta-cystathionase) ACIAD3223 3137469 - 3139007 + | nucleotide triphosphate hydrolase domain-containing protein TERM 3712 3139025 - 3139060 + F 100 -11.4 -6.09196 | opp_overlap 3139039 CGTCGCGTATGCAGA GCTTCTTTAATAAGGA GAGA TTCTCATTAAAGAAGC TTTTTTTATTTTCAC ACIAD3225 3139321 - 3140220 + | putative transcriptional regulator ACIAD3226 3140306 - 3141070 + | putative flavohemoprotein (hemoglobin-like protein) (flavohemoglobin) ACIAD3227 3141165 - 3141602 + | hypothetical protein TERM 3713 3141772 - 3141762 - g 75 -2.4 -5.31877 | AGTTACGAGAAAAAA GCTG ATC CTGC GATTACAGAGTATTC engB 3141657 - 3142541 + | GTPase EngB TERM 3714 3142589 - 3142619 + F 93 -8.4 -5.71983 | ATATTGACACTCGAA TGTCCTAAATTGCT AAT AACTATTTAGGACA TTTTTTTATACTTAA ACIAD3229 3142675 - 3143625 + | hypothetical protein TERM 3715 3143678 - 3143649 - T 70 -8 -3.30038 | opp_overlap 3143655 3143673, overlap 3143655 TATACTCAAATCCAA TAAAAAGCAGGA TTAGTC TCCTGCTTTTTT GAGTCATTTTTTTAG TERM 3716 3143672 - 3143655 - T 88 -7 -5.16151 | opp_overlap 3143655, overlap 3143649 CAAATCCAATAAAAA GCAGGA TTAGTC TCCTGC TTTTTTGAGTCATTT TERM 3717 3143655 - 3143672 + T 88 -7 -5.13521 | opp_overlap 3143655 3143649 CAAATCCAATAAAAA GCAGGA TTAGTC TCCTGC TTTTTTGAGTCATTT ACIAD3230 3144952 - 3143711 - | putative proton/sodium-glutamate symport protein TERM 3718 3144243 - 3144227 - G 78 -8.7 -3.85242 | overlap 3144218 AAAGATCCACAATAA CAGTGGC AAG ACCACTG CACCATGAAAAATCG tesB 3145906 - 3145034 - | acyl-CoA thioesterase II TERM 3719 3145251 - 3145270 + g 70 -9.4 -2.8333 | opp_overlap 3145250 3145251 CTCGGTGAAAGATAG CTTAAACC ATGC GGTTTAAG TGCTGTTGTCATTAA TERM 3720 3148626 - 3148612 - g 74 -10 -3.14602 | opp_overlap 3148606 3148621, overlap 3148610 GTCAGTTTAGCAATA TGGCAC AAG GTGCCA AACTGGTGCTTGATG plsB 3146193 - 3148757 + | glycerol-3-phosphate acyltransferase TERM 3721 3148811 - 3148766 - T 82 -9.9 -3.65722 | opp_overlap 3148777 3148781, overlap 3148777 3148781 AAAATAATTTTTAAA TCACTACTCAATAAAGGTCAC CACG GTGACCTTTATTTATGAGCGA AACTGGCACTCAAAA TERM 3722 3148777 - 3148800 + T 95 -12.6 -3.85817 | opp_overlap 3148766 3148777 3148781, overlap 3148781 TAAATCACTACTCAA TAAAGGTCAC CACG GTGACCTTTA TTTATGAGCGAAACT TERM 3723 3148800 - 3148777 - T 87 -12.6 -3.12402 | opp_overlap 3148777 3148781, overlap 3148766 3148781 TAAATCACTACTCAA TAAAGGTCAC CACG GTGACCTTTA TTTATGAGCGAAACT TERM 3724 3148781 - 3148796 + T 89 -9 -4.55295 | opp_overlap 3148777 3148766 3148781, overlap 3148777 TCACTACTCAATAAA GGTCAC CACG GTGACC TTTATTTATGAGCGA TERM 3725 3148796 - 3148781 - T 85 -9 -4.21974 | opp_overlap 3148781 3148777, overlap 3148777 3148766 TCACTACTCAATAAA GGTCAC CACG GTGACC TTTATTTATGAGCGA ACIAD3233 3149791 - 3148802 - | putative RND type efflux pump involved in aminoglycoside resistance (adeT) TERM 3726 3149582 - 3149599 + g 74 -4.1 -4.99861 | opp_overlap 3149585, overlap 3149585 ACATTGTTTTTGATC AAAGCGA AGTA TCGCTTC TTTTTCTGATTGATA TERM 3727 3149585 - 3149596 + g 75 -5.8 -4.58563 | opp_overlap 3149585, overlap 3149582 TTGTTTTTGATCAAA GCGA AGTA TCGC TTCTTTTTCTGATTG ACIAD3234 3150804 - 3149923 - | putative nucleoside-diphosphate-sugar epimerase TERM 3728 3151131 - 3151143 + GH 71 -7.7 -3.63073 | TTAGAAATGTATCAT CCTGA AAT TCAGG TTATTCACGACTATA recG 3150747 - 3152807 + | ATP-dependent DNA helicase TERM 3729 3153044 - 3153058 + G 70 -5.6 -4.28361 | opp_overlap 3153044, overlap 3153046 GTCTGCATTATCAAA GTCTGC TGA GCAGTC TTTTGCTCACATTGC ACIAD3236 3152794 - 3153435 + | putative DNA transformation protein (ComF) ACIAD3237 3153843 - 3153439 - | putative MutT/nudix family protein ACIAD3238 3154455 - 3153856 - | putative signal peptide TERM 3730 3154472 - 3154486 + H 77 -8.6 -3.55203 | TTGTTAATTTGTCAT GCTTAC AAA GTAAGC TTTAGGAAAAATTTT TERM 3731 3154645 - 3154660 + G 74 -6.1 -4.44797 | GTAGTCTGGAAGATG CCACC ATCAAC GGTGG TTTTGATCTTCATCC TERM 3732 3155517 - 3155534 + G 75 -5.5 -4.74706 | CAAGAACTACCCTTT GCACATG GCAC CATGAGC TTTTTAACTGTTGCA corA 3154524 - 3155612 + | magnesium and cobalt transport protein TERM 3733 3155645 - 3155629 - T 100 -12.3 -5.60993 | opp_overlap 3155629, overlap 3155614 CTTTTGATAAAAAAA GCACCGA ACC TCGGTGC TTTTTTATTGGTAGC TERM 3734 3155629 - 3155645 + T 100 -12.3 -5.5112 | opp_overlap 3155629 3155614 CTTTTGATAAAAAAA GCACCGA ACC TCGGTGC TTTTTTATTGGTAGC ACIAD3240 3155960 - 3155664 - | putative toluene-tolerance protein (Ttg2E) ACIAD3241 3156609 - 3155971 - | putative toluene tolerance protein (Ttg2D) ttg2C 3157293 - 3156622 - | toluene tolerance efflux ABC transporter periplasmic substrate-binding protein TERM 3735 3156895 - 3156921 + g 81 -4.4 -5.30616 | GGTAATGGATTTCAT GTTATCGATCAG TTG CTGTTCCATGAC TTTTTGTTTCGCTGG ttg2B 3158069 - 3157293 - | toluene tolerance efflux ABC transporter membrane protein ttg2A 3158884 - 3158066 - | toluene tolerance efflux ABC transporter ATP-binding protein TERM 3736 3159249 - 3159220 - R 100 -16.7 -3.55889 | opp_overlap 3159220 3159227, overlap 3159227 ATATATTAATCACAA TAAAAAAGCCGAC ATTC GTCGGCTTTTTTA TATATCACTCAGAAT TERM 3737 3159220 - 3159249 + r 100 -16.7 -2.91383 | opp_overlap 3159220 3159227, overlap 3159227 ATATATTAATCACAA TAAAAAAGCCGAC ATTC GTCGGCTTTTTTA TATATCACTCAGAAT TERM 3738 3159242 - 3159227 - R 100 -10.4 -5.59534 | opp_overlap 3159220 3159227, overlap 3159220 AATCACAATAAAAAA GCCGAC ATTC GTCGGC TTTTTTATATATCAC TERM 3739 3159227 - 3159242 + r 100 -10.4 -5.4251 | opp_overlap 3159227 3159220, overlap 3159220 AATCACAATAAAAAA GCCGAC ATTC GTCGGC TTTTTTATATATCAC ACIAD3245 3161186 - 3159264 - | putative ATP-dependent RNA helicase TERM 3740 3160592 - 3160576 - G 70 -9.5 -2.87405 | AGACGAATAATACGA TCTGCAA ATG TTGCAGA GAACATCAAAGTTTG TERM 3741 3161533 - 3161503 - R 100 -12 -4.72272 | opp_overlap 3161508, overlap 3161508 GGTTTTTACCAAAAA TAAAAGAGCAACCT TTT AGGCTGCTCTTTTT GTTTAACTTTTGAGG TERM 3742 3161508 - 3161528 + r 100 -9.7 -5.34381 | opp_overlap 3161503 3161508 TTACCAAAAATAAAA GAGCAACCT TTT AGGCTGCTC TTTTTGTTTAACTTT TERM 3743 3161528 - 3161508 - R 100 -11.9 -5.3104 | opp_overlap 3161508, overlap 3161503 TTACCAAAAATAAAA GAGCAACCT TTT AGGCTGCTC TTTTTGTTTAACTTT suhB 3162383 - 3161553 - | inositol-1-monophosphatase (IMPase) (inositol-1-phosphatase) (I-1-Pase) TERM 3744 3162130 - 3162118 - G 75 -9.1 -3.64703 | TGTGTGCCATCTAAA GGGTC AAT GACCC AACACCAATCTGCAT TERM 3745 3162461 - 3162434 - R 93 -9.2 -4.50943 | opp_overlap 3162434 GAATAATGCATAAAA GCGCGCTAATTC TATC AAATCAACGCGC CTTTTGGTAAAAAAT dxs 3164422 - 3162500 - | 1-deoxy-D-xylulose-5-phosphate synthase TERM 3746 3163535 - 3163555 + g 75 -3.1 -5.22312 | AATTGGGTCTGCTTC GGCAGGTTC GAA GCCCTTGCC TTTTTTGGTATAAAT ribA 3164715 - 3165317 + | GTP cyclohydrolase II TERM 3747 3165338 - 3165369 + F 89 -3 -5.77632 | TAACCCGATCACTCA GTAAGGGATCATAA TCGT TAAAAATCCCTTAC TTTTTTTATGGTTTT TERM 3748 3166255 - 3166280 + G 76 -9.7 -3.29273 | overlap 3166254 3166256 TTGAATCCATTTTAG TCAGCCTGCCA AATC TGGCAGGGTGG TCTTATCGTCCTGAA TERM 3749 3166256 - 3166279 + G 76 -11 -2.57243 | overlap 3166255 3166254 TGAATCCATTTTAGT CAGCCTGCCA AATC TGGCAGGGTG GTCTTATCGTCCTGA hemF 3165390 - 3166370 + | coproporphyrinogen III oxidase TERM 3750 3166386 - 3166412 + F 75 -8.1 -3.76232 | opp_overlap 3166385 3166386 3166388 TATTCGCTTGCAAAT GAGACTATTTC TTATT GATATAGTCTC TTGTCTATTTACAGG ACIAD3253 3166583 - 3166789 + | hypothetical protein ACIAD3254 3167479 - 3166832 - | putative enzyme hemH 3168514 - 3167492 - | ferrochelatase ACIAD3256 3169610 - 3168573 - | hypothetical protein TERM 3751 3169020 - 3169040 + g 84 -3.9 -5.47218 | opp_overlap 3169019, overlap 3169021 AGATACATCACAGAT CGCGACCAT ATC ATGCTCGCA TTTTTTTAACTCACG TERM 3752 3169021 - 3169039 + g 70 -7.4 -3.87608 | opp_overlap 3169019, overlap 3169020 GATACATCACAGATC GCGACCAT ATC ATGCTCGC ATTTTTTTAACTCAC murI 3170595 - 3169717 - | glutamate racemase TERM 3753 3170443 - 3170431 - G 79 -7.7 -4.36596 | CCCATAAGGAACAAA TGCAG TAT CTGCA TAGTAGACAATCTGT ACIAD3258 3171253 - 3170642 - | hypothetical protein TERM 3754 3171196 - 3171213 + g 70 -2.7 -5.00884 | overlap 3171198 3171199 3171202 TGTTCATTAAGTTTT TATCATC CACA GATGGTG TTTTTTCCACCGACT etfD 3171439 - 3173151 + | electron transfer flavoprotein-ubiquinone oxidoreductase TERM 3755 3173205 - 3173221 + T 89 -6.6 -5.76633 | opp_overlap 3173205, overlap 3173190 ACTGACATAAAAAAA CTGGAT ACAAG ATCCAG TTTTTTTATGTCTAA TERM 3756 3173221 - 3173205 - T 89 -6.6 -5.72616 | opp_overlap 3173190 3173205 ACTGACATAAAAAAA CTGGAT ACAAG ATCCAG TTTTTTTATGTCTAA ACIAD3261 3175515 - 3173239 - | hypothetical protein TERM 3757 3175287 - 3175298 + g 80 -3.6 -5.33848 | CATCTGCATCCAAAG CGGC ATGA GCTG TTTTTTGGTTGTGCT ACIAD3262 3175753 - 3177576 + | putative acyl-CoA dehydrogenase TERM 3758 3177587 - 3177623 + T 100 -18.4 -3.41982 | opp_overlap 3177590 3177597, overlap 3177590 3177597 ACTAATCTGTTACAC GAATAAAAAAGAGCAC CTTGC GTGCTCTTTTTTATTC TTCATTGGTGGCTTT TERM 3759 3177620 - 3177590 - T 95 -14.3 -3.26319 | opp_overlap 3177587 3177590 3177597, overlap 3177597 AATCTGTTACACGAA TAAAAAAGAGCAC CTTGC GTGCTCTTTTTTA TTCTTCATTGGTGGC TERM 3760 3177590 - 3177620 + T 100 -14.3 -3.83844 | opp_overlap 3177590 3177597, overlap 3177587 3177597 AATCTGTTACACGAA TAAAAAAGAGCAC CTTGC GTGCTCTTTTTTA TTCTTCATTGGTGGC TERM 3761 3177597 - 3177613 + T 93 -8 -5.66229 | opp_overlap 3177590 3177597, overlap 3177590 3177587 TACACGAATAAAAAA GAGCAC CTTGC GTGCTC TTTTTTATTCTTCAT TERM 3762 3177613 - 3177597 - T 93 -8 -5.5353 | opp_overlap 3177597 3177590 3177587, overlap 3177590 TACACGAATAAAAAA GAGCAC CTTGC GTGCTC TTTTTTATTCTTCAT ACIAD3263 3178283 - 3177618 - | hypothetical protein ACIAD3264 3178571 - 3178840 + | hypothetical protein TERM 3763 3178869 - 3178902 + T 93 -3.9 -6.11243 | TGACCGCACTTGGTC GCTACGGTTGT TACCCCCTAAGC TCAACCGTAGC TTTTTTTTATTGAGT ACIAD3266 3180027 - 3178909 - | hypothetical protein ACIAD3267 3181279 - 3180113 - | hypothetical protein glyQ 3181266 - 3182243 + | glycyl-tRNA synthetase subunit alpha glyS 3182243 - 3184312 + | glycyl-tRNA synthetase subunit beta TERM 3764 3184364 - 3184343 - f 77 -5.8 -4.65933 | opp_overlap 3184343 GATCTTTAAAATAAA CCCCGCTA TAAAAT TAGTGGGG TTTTTATTTAAATTT TERM 3765 3184343 - 3184364 + F 90 -8 -5.34381 | opp_overlap 3184343 GATCTTTAAAATAAA CCCCGCTA TAAAAT TAGTGGGG TTTTTATTTAAATTT TERM 3766 3184547 - 3184533 - g 78 -2.1 -5.4492 | TAGATAGAGAAAAAA TGGTC CCATT AACCA TACAAGAGGAACAAG ACIAD3270 3184532 - 3185536 + | putative cytoplasmic protein ACIAD3271 3185897 - 3185718 - | hypothetical protein ACIAD3272 3186002 - 3185901 - | hypothetical protein TERM 3767 3186040 - 3186072 + r 100 -19.5 -3.78775 | opp_overlap 3186036 3186034 3186047, overlap 3186043 TACATGACATAGCGT TAAGCTACAGATCAT TTA ATGATCTGTAGCTTA TTTGATAGTACGCCG TERM 3768 3186043 - 3186069 + r 100 -16.8 -4.0274 | opp_overlap 3186036 3186034 3186047, overlap 3186040 ATGACATAGCGTTAA GCTACAGATCAT TTA ATGATCTGTAGC TTATTTGATAGTACG TERM 3769 3186065 - 3186047 - R 77 -10.4 -2.53581 | opp_overlap 3186043 3186040, overlap 3186036 3186034 CATAGCGTTAAGCTA CAGATCAT TTA ATGATCTG TAGCTTATTTGATAG ACIAD3273 3186972 - 3186070 - | hypothetical protein ACIAD3274 3187102 - 3187956 + | putative transcriptional regulator ACIAD3276 3188035 - 3188424 + | hypothetical protein TERM 3770 3188431 - 3188462 + F 86 -5.8 -5.54907 | overlap 3188434 3188437 TGCCAATAAACTGTT CATTTAGCCCTTGG TTTT CCAAGGGCTTATTC TTTTTATTTTGTCCA TERM 3771 3188434 - 3188459 + F 100 -11.9 -4.82111 | overlap 3188431 3188437 CAATAAACTGTTCAT TTAGCCCTTGG TTTT CCAAGGGCTTA TTCTTTTTATTTTGT TERM 3772 3188437 - 3188456 + F 100 -13.6 -4.42156 | overlap 3188434 3188431 TAAACTGTTCATTTA GCCCTTGG TTTT CCAAGGGC TTATTCTTTTTATTT ACIAD3277 3188587 - 3189084 + | hypothetical protein hprA 3190044 - 3189088 - | glycerate dehydrogenase ACIAD3279 3190351 - 3190953 + | hypothetical protein TERM 3773 3191026 - 3190991 - T 95 -15 -3.16881 | opp_overlap 3191000, overlap 3191000 TATTGATCTGATCAA CATAAAAAAGGGACGA TTTT TCGTCCCTTTTTTATT TAAATTACGCTTTAT TERM 3774 3191017 - 3191000 - T 100 -11.3 -5.49569 | opp_overlap 3191000, overlap 3190991 GATCAACATAAAAAA GGGACGA TTTT TCGTCCC TTTTTTATTTAAATT TERM 3775 3191000 - 3191017 + T 100 -11.3 -5.67283 | opp_overlap 3190991 3191000 GATCAACATAAAAAA GGGACGA TTTT TCGTCCC TTTTTTATTTAAATT ACIAD3280 3192303 - 3191038 - | hypothetical protein TERM 3776 3191114 - 3191125 + g 71 -3 -4.91712 | opp_overlap 3191120 CCATGCTCGTCACTG CTTA AATT TAAG TTTTTATAACTTAAA dkg 3193357 - 3192464 - | 2,5-diketo-D-gluconate reductase ACIAD3283 3193523 - 3194293 + | putative SAM-dependent methyltransferase ACIAD3284 3194318 - 3194872 + | hypothetical protein ACIAD3285 3195487 - 3194915 - | hypothetical protein ACIAD3286 3196048 - 3195596 - | hypothetical protein ACIAD3288 3196187 - 3196831 + | putative partition-related protein ACIAD3289 3196958 - 3198070 + | hypothetical protein ACIAD3290 3198366 - 3198977 + | putative NADH-flavin reductase TERM 3777 3199015 - 3198996 - f 71 -6.4 -4.17355 | opp_overlap 3198995, overlap 3198991 TAAATAATAACCAAA GGGCTG GCTCCTTG CAGCCC CTTACCTCCAGAGAT TERM 3778 3199026 - 3199048 + F 100 -10.7 -6.25578 | opp_overlap 3199030 AGCCCCTTACCTCCA GAGATCTCA GACAA TGAGATCTC TTTTTTTTATTTAAT ACIAD3291 3199153 - 3201303 + | hypothetical protein mdfA 3202586 - 3201357 - | major facilitator superfamily multidrug/chloramphenicol efflux transporter ACIAD3293 3202581 - 3202736 + | hypothetical protein TERM 3779 3202766 - 3202750 - fH 74 -9.5 -3.01269 | overlap 3202752 AAGTTTGAAAGGAGA CATCACA ATC TGTGATG ATAAATGTAATTGAT TERM 3780 3202893 - 3202918 + FH 76 -7.7 -4.07687 | ATTTTTGATATCTGT TGTGCATAACT AAAA AGTTATCCACA TTTTAAGCCGAGAGT mdaB 3203073 - 3203693 + | modulator of drug activity, electron transfer flavoprotein-NAD/FAD/quinone oxidoreductase ACIAD3296 3203690 - 3204007 + | hypothetical protein ACIAD3297 3205662 - 3204103 - | putative cytidine / deoxycytidylate deaminase family protein TERM 3781 3205866 - 3205844 - R 76 -4.2 -5.05153 | opp_overlap 3205845 3205847, overlap 3205845 3205847 3205848 ATTTGAAAAAATAAA GCACTCAAAA TAC TTTTGAGTAT TCTGAAAATAGCAGA TERM 3782 3205865 - 3205845 - R 71 -7.7 -3.61465 | opp_overlap 3205845 3205847, overlap 3205844 3205847 3205848 TTTGAAAAAATAAAG CACTCAAAA TAC TTTTGAGTA TTCTGAAAATAGCAG TERM 3783 3205863 - 3205847 - R 72 -8.1 -3.36588 | opp_overlap 3205845 3205847, overlap 3205845 3205844 3205848 TGAAAAAATAAAGCA CTCAAAA TAC TTTTGAG TATTCTGAAAATAGC TERM 3784 3205847 - 3205863 + r 70 -8.1 -3.22475 | opp_overlap 3205847 3205845 3205844 3205848, overlap 3205845 TGAAAAAATAAAGCA CTCAAAA TAC TTTTGAG TATTCTGAAAATAGC ACIAD3298 3206837 - 3206031 - | putative short-chain dehydrogenase TERM 3785 3207034 - 3207017 - R 87 -6.3 -5.5112 | opp_overlap 3207017, overlap 3207030 TTCAGCAACAAAAAA GTGCATC CGCA AATGCAC TTTGAGTAGCAGTAT ACIAD3299 3207461 - 3207081 - | hypothetical protein TERM 3786 3207502 - 3207479 - R 100 -11 -5.77571 | opp_overlap 3207479 ATCAAAAAACAAAAA GGCGTAGCTT TATG ATGCTACGCC TTTTTCAGTTACACT TERM 3787 3207479 - 3207502 + r 100 -11 -4.74504 | opp_overlap 3207479 ATCAAAAAACAAAAA GGCGTAGCTT TATG ATGCTACGCC TTTTTCAGTTACACT ACIAD3300 3208960 - 3207551 - | putative FAD/FMN-containing dehydrogenase TERM 3788 3209549 - 3209583 + G 71 -10 -2.59035 | opp_overlap 3209554, overlap 3209545 3209553 3209554 3209556 TTTAACGCGCCTTAT TCAAACACCCGTTCAG TTG CTGAACTGGTGCTTGC TGAATTGATCCTTCT TERM 3789 3209553 - 3209579 + G 72 -9.4 -3.22884 | opp_overlap 3209554, overlap 3209549 3209545 3209554 3209556 ACGCGCCTTATTCAA ACACCCGTTCAG TTG CTGAACTGGTGC TTGCTGAATTGATCC TERM 3790 3209578 - 3209554 - g 100 -12.9 -3.64703 | opp_overlap 3209553 3209549 3209545 3209554 3209556 CGCGCCTTATTCAAA CACCCGTTCAG TTG CTGAACTGGTG CTTGCTGAATTGATC TERM 3791 3209554 - 3209578 + G 90 -12.9 -2.53409 | opp_overlap 3209554, overlap 3209553 3209549 3209545 3209556 CGCGCCTTATTCAAA CACCCGTTCAG TTG CTGAACTGGTG CTTGCTGAATTGATC TERM 3792 3209556 - 3209576 + G 72 -9.7 -2.8007 | opp_overlap 3209554, overlap 3209554 3209553 3209549 3209545 CGCCTTATTCAAACA CCCGTTCAG TTG CTGAACTGG TGCTTGCTGAATTGA serA 3209228 - 3210460 + | D-3-phosphoglycerate dehydrogenase TERM 3793 3210497 - 3210479 - f 95 -13.2 -3.87994 | opp_overlap 3210479 ATGCATCTCGAGAAA GCCACAGA CCG TCTGTGGC TTTTTTATATCAACA TERM 3794 3210479 - 3210497 + F 100 -13.2 -5.36441 | opp_overlap 3210479 ATGCATCTCGAGAAA GCCACAGA CCG TCTGTGGC TTTTTTATATCAACA TERM 3795 3211293 - 3211305 + G 83 -9.1 -4.18161 | overlap 3211290 TATGAGTCTAGAGCC TGCGG TTG CCGCA TTTTCAGGCTTTGTA ACIAD3303 3210553 - 3211440 + | hypothetical protein ACIAD3304 3211516 - 3212403 + | hypothetical protein ACIAD3305 3212868 - 3212419 - | hypothetical protein TERM 3796 3212907 - 3212950 + r 74 -3.2 -5.23292 | opp_overlap 3212917, overlap 3212911 3212912 3212917 CTTTTAGTGGCTAAA CAAGAAAAAAGAGCACTCCA CATA TGGAATGCTCTTTTAGTTTA TTTTGTTTTGTCTGA TERM 3797 3212911 - 3212946 + r 83 -6.2 -5.06411 | opp_overlap 3212917, overlap 3212907 3212912 3212917 TAGTGGCTAAACAAG AAAAAAGAGCACTCCA CATA TGGAATGCTCTTTTAG TTTATTTTGTTTTGT TERM 3798 3212912 - 3212945 + r 82 -9.7 -3.60186 | opp_overlap 3212917, overlap 3212911 3212907 3212917 AGTGGCTAAACAAGA AAAAAGAGCACTCCA CATA TGGAATGCTCTTTTA GTTTATTTTGTTTTG TERM 3799 3212917 - 3212940 + r 100 -9.6 -4.76478 | opp_overlap 3212917, overlap 3212912 3212911 3212907 CTAAACAAGAAAAAA GAGCACTCCA CATA TGGAATGCTC TTTTAGTTTATTTTG TERM 3800 3212940 - 3212917 - R 100 -11.8 -5.72254 | opp_overlap 3212917 3212912 3212911 3212907 CTAAACAAGAAAAAA GAGCACTCCA CATA TGGAATGCTC TTTTAGTTTATTTTG ACIAD3306 3213787 - 3213017 - | hypothetical protein TERM 3801 3213217 - 3213206 - G 75 -5.8 -4.58395 | TGTAGGCGCCAAAAA GCTG AGTG CAGC CAGATTGGTCATGAA truB 3214756 - 3213800 - | tRNA pseudouridine 55 synthase TERM 3802 3213897 - 3213881 - G 76 -9.5 -3.57263 | ACGTTCACCCTCAAA TACCAGA ACT TCTGGTA CTGCATCGTGGTCAA TERM 3803 3214270 - 3214230 - G 83 -11.9 -2.6381 | opp_overlap 3214234, overlap 3214234 ACAAGTTTGAGAGCA TGAATTGTGACTGGGCGTG CTT CACGCTCAATCTCAATTCC TTGACGTGCCAATTC TERM 3804 3214234 - 3214266 + g 86 -11.3 -3.35813 | opp_overlap 3214230 3214234 GTTTGAGAGCATGAA TTGTGACTGGGCGTG CTT CACGCTCAATCTCAA TTCCTTGACGTGCCA TERM 3805 3214266 - 3214234 - G 86 -11.3 -3.24747 | opp_overlap 3214234, overlap 3214230 GTTTGAGAGCATGAA TTGTGACTGGGCGTG CTT CACGCTCAATCTCAA TTCCTTGACGTGCCA lifO 3214851 - 3215882 + | lipase chaperone ACIAD3309 3216014 - 3216982 + | lipase TERM 3806 3217007 - 3217024 + T 90 -8.4 -4.93296 | opp_overlap 3217007 ACCAGATGTAAAAAA TGCGCC CAATCA GGCGCA TTTTTATGCTGATAA TERM 3807 3217024 - 3217007 - T 100 -9.1 -5.13473 | opp_overlap 3217007 ACCAGATGTAAAAAA TGCGCCC AATC AGGCGCA TTTTTATGCTGATAA rplS 3217423 - 3217052 - | 50S ribosomal protein L19 trmD 3218314 - 3217565 - | tRNA (guanine-1-)-methyltransferase TERM 3808 3218093 - 3218067 - G 72 -9.4 -3.13522 | opp_overlap 3218071 3218073, overlap 3218065 3218070 ACTGGCGCATGAACA CAACCTGCTTGC TCA GCAAGCTGTTTG GCATGAATAATCGCT TERM 3809 3218071 - 3218089 + g 75 -8.8 -3.61356 | opp_overlap 3218070 3218067 3218065, overlap 3218073 GCGCATGAACACAAC CTGCTTGC TCA GCAAGCTG TTTGGCATGAATAAT TERM 3810 3218073 - 3218087 + g 76 -10 -3.38522 | opp_overlap 3218070 3218067 3218065, overlap 3218071 GCATGAACACAACCT GCTTGC TCA GCAAGC TGTTTGGCATGAATA rimM 3218910 - 3218362 - | 16S rRNA processing protein TERM 3811 3218743 - 3218797 + g 100 -13.9 -3.23538 | gap 1, overlap 3218746 CCAACGTTTTACATC TACTGTTTGCCAGCCTGCTTTGGTTT CAAT AAACCAAGGCAGGTAGTCAAACA-TA TTGCTCATGGGTTCT TERM 3812 3218746 - 3218795 + g 100 -18.1 -3.17794 | overlap 3218743 ACGTTTTACATCTAC TGTTTGCCAGCCTGCTTTGGTTT CAAT AAACCAAGGCAGGTAGTCAAACA TATTGCTCATGGGTT TERM 3813 3218934 - 3218947 + r 73 -3.7 -5.15969 | TACTACAAAACTTAT GCAGC AGTC GCAGC TTTTTTAGCTTGAGC rpsP 3219187 - 3218930 - | 30S ribosomal protein S16 comF 3219769 - 3219335 - | pilin like competence factor TERM 3814 3219375 - 3219385 + g 73 -8.2 -3.73968 | overlap 3219379 CTACTCAGGCTACAT GCCG TTG CGGC TTTGCTCCAAAATTT TERM 3815 3219527 - 3219547 + g 70 -9.8 -2.52896 | opp_overlap 3219543 3219544 TGTGTAAAATGCTGT GCCAGTTA CAGGA TAACTGGC TGCATTGCCAAGTCC comE 3220278 - 3219769 - | pilin like competence factor TERM 3816 3220330 - 3220301 - R 91 -12.3 -3.22298 | opp_overlap 3220301 3220300 TCCATTGAGCATTAA CGCCATACCAAAT CATC ATTCAGTATGGCG ATTTTCAGATTAAGG comC 3224692 - 3220340 - | competence factor involved in DNA binding and uptake TERM 3817 3224265 - 3224289 + g 74 -6.5 -4.56775 | CGTGCATAGTTATAT TTACTACTGGG TGA TTCAGTAGTGA TTTTTAAAAGCGGAT ACIAD3317 3225377 - 3224709 - | putative type 4 fimbrial biogenesis protein (PilX) comB 3226342 - 3225374 - | pilin like competence factor TERM 3818 3225452 - 3225464 + g 91 -5.5 -5.64006 | AACTACTTGGCGCAA TCGGG TAT CCTGA TTTTTTTCATTGAGT ACIAD3319 3226885 - 3226343 - | putative type 4 fimbrial biogenesis protein (PilV) ACIAD3321 3227322 - 3226876 - | putative type 4 fimbrial biogenesis protein (FimU) TERM 3819 3227425 - 3227403 - R 100 -16.4 -5.27923 | opp_overlap 3227396 3227394 TAAGTGCATAAAAAA GCGGATGAGT GAC ACTCATCCGC TTCAGAATATTATTA ispH 3228399 - 3227449 - | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase TERM 3820 3228255 - 3228237 - G 81 -5.2 -5.1356 | overlap 3228238 GTTCATCAACAAAAA TTGCGCCA CGC TGACGCAG ATCATCGACCACGAA TERM 3821 3228254 - 3228238 - G 75 -8.7 -3.67413 | overlap 3228237 TTCATCAACAAAAAT TGCGCCA CGC TGACGCA GATCATCGACCACGA TERM 3822 3228605 - 3228631 + G 75 -10.3 -2.90212 | overlap 3228609 CGTCAAAGCTCTTCT GGAACGTGTAA CCAAC TTACACGTTTC TGTATCGCATACTAC TERM 3823 3228609 - 3228627 + G 73 -7.5 -4.13246 | overlap 3228605 AAAGCTCTTCTGGAA CGTGTAA CCAAC TTACACG TTTCTGTATCGCATA gmk 3228534 - 3229157 + | guanylate kinase rpoZ 3229226 - 3229507 + | RNA polymerase, omega subunit TERM 3824 3229529 - 3229544 + F 87 -6.8 -5.55769 | opp_overlap 3229529 ATAATGAGTATTAAA GCGTCT TTTA AGGCGC TTTTTTATTATCAAC TERM 3825 3229827 - 3229807 - f 74 -9.1 -3.14344 | opp_overlap 3229806 TATGCTTTTCATTAA GAGAGATAA ATT TTATCTCCC ATATATAAAAGGTGT TERM 3826 3231230 - 3231220 - g 80 -4.6 -5.10968 | ATCAATACACAAAAA GCAC GAC GCGC AATACAAAATATGCT ACIAD3326 3229846 - 3231960 + | putative bifunctional guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase/(p)ppGpp synthetase II ACIAD3327 3232037 - 3232420 + | hypothetical protein TERM 3827 3232440 - 3232458 + F 93 -6 -5.7946 | opp_overlap 3232440 AAATTATTTAATTAA CACCAC CTATTGC GTGGTG TTTTTTTATTCAAAA ACIAD3328 3232559 - 3232768 + | putative regulatory or redox component complexing with Bfr, in iron storage and mobility (BFD) TERM 3828 3232850 - 3232871 + F 83 -7.3 -4.65933 | GATCATATTCTCCTC CCCGCTT CTGACTCT AAGCGGG TTTATTTTGAGCATC bfrB 3233069 - 3233494 + | bacterioferritin TERM 3829 3233519 - 3233536 + F 100 -11.3 -5.67063 | opp_overlap 3233519 CCACCGTATAAAAAA GATCCCG ATAT CGGGATC TTTTTTTATGCTCAA TERM 3830 3233536 - 3233519 - f 100 -11.3 -5.26316 | opp_overlap 3233519 CCACCGTATAAAAAA GATCCCG ATAT CGGGATC TTTTTTTATGCTCAA ACIAD3332 3233797 - 3234270 + | hypothetical protein ACIAD3333 3235172 - 3234267 - | putative lipoprotein signal peptide ACIAD3334 3237604 - 3235250 - | putative porin protein involved in fimbrial biogenesis (PapC-like) ACIAD3335 3238340 - 3237618 - | putative pili assembly chaperone ACIAD3336 3238850 - 3238386 - | hypothetical protein TERM 3831 3238761 - 3238773 + g 72 -7.7 -3.90112 | opp_overlap 3238756 3238754 ATCAAAATTAGTTGA TGCAG TTT CTGCA TTTACTTGAGAAACG ACIAD3337 3240821 - 3239175 - | hypothetical protein TERM 3832 3239751 - 3239727 - G 100 -8.9 -5.84432 | opp_overlap 3239733, overlap 3239733 CACAACACAAAAAAA TAAAAATAAAT CAG ATTTATTTTTA ATTGAAGAATATAGC TERM 3833 3239745 - 3239733 - G 91 -3.5 -5.89659 | opp_overlap 3239733, overlap 3239727 ACAAAAAAATAAAAA TAAAT CAG ATTTA TTTTTAATTGAAGAA TERM 3834 3239733 - 3239745 + g 70 -3.5 -4.8622 | opp_overlap 3239733 3239727 ACAAAAAAATAAAAA TAAAT CAG ATTTA TTTTTAATTGAAGAA TERM 3835 3240864 - 3240831 - R 87 -11.3 -3.30243 | opp_overlap 3240837 3240840, overlap 3240837 3240840 ATTCATTTTTTATAA TTTAAAGAAGAACTT ATAA AAGTTCTTCTTTTAA AGCCATATAGTACTA TERM 3836 3240858 - 3240837 - R 87 -10.3 -3.80625 | opp_overlap 3240837 3240840, overlap 3240831 3240840 TTTTTATAATTTAAA GAAGAACTT ATAA AAGTTCTTC TTTTAAAGCCATATA TERM 3837 3240837 - 3240858 + r 100 -10.3 -4.09243 | opp_overlap 3240837 3240831 3240840, overlap 3240840 TTTTTATAATTTAAA GAAGAACTT ATAA AAGTTCTTC TTTTAAAGCCATATA comP 3241326 - 3240883 - | competence factor involved in DNA binding and uptake TERM 3838 3241678 - 3241652 - R 86 -11 -3.23708 | opp_overlap 3241657 3241674 3241675, overlap 3241657 TCGCCTTAAAAATTA TAAAACCAGCCT TAA AGACTGGTTCTA ATTAAACTATTTAAC TERM 3839 3241673 - 3241657 - R 93 -8.7 -4.72556 | opp_overlap 3241657, overlap 3241652 TTAAAAATTATAAAA CCAGCCT TAA AGACTGG TTCTAATTAAACTAT adhA 3242725 - 3241694 - | alcohol dehydrogenase TERM 3840 3242438 - 3242424 - G 73 -8.6 -3.61715 | CAGCCGGCGTAACAA TGGTCA CAA TGACCA CATGCCGAATATAAC TERM 3841 3242704 - 3242691 - G 74 -6.7 -4.25848 | AACGGTTGATTAAAA GCAGT GACT ACTGC AGCTTTCATTAAACT ACIAD3340 3243530 - 3244393 + | putative hydrolase ACIAD3341 3244453 - 3247242 + | putative arginine/lysine/ornithine decarboxylase ACIAD3342 3247284 - 3248843 + | biotin carboxylase-like protein ACIAD3343 3248853 - 3249875 + | hypothetical protein ACIAD3344 3250485 - 3249925 - | hypothetical protein ACIAD3345 3251528 - 3250479 - | hypothetical protein ACIAD3347 3252161 - 3251571 - | putative signal peptide TERM 3842 3252271 - 3252257 - R 93 -7.1 -5.47431 | opp_overlap 3252257, overlap 3252248 TTAATACATAAAAAA CGGGT GCTTG ACCCG TTTCTATGTTTACCC TERM 3843 3252257 - 3252271 + r 78 -7.1 -4.27886 | opp_overlap 3252248 3252257 TTAATACATAAAAAA CGGGT GCTTG ACCCG TTTCTATGTTTACCC ACIAD3348 3253185 - 3252295 - | hypothetical protein TERM 3844 3253335 - 3253304 - R 100 -12.4 -4.96848 | opp_overlap 3253311, overlap 3253306 3253311 TGTGTCATACAAAAA CACAAAAGCCTGCA TCTT TGCAGGCTTTTGAA ATGGATCTTTAAATA TERM 3845 3253333 - 3253306 - R 100 -17.2 -4.11141 | opp_overlap 3253311, overlap 3253304 3253311 TGTCATACAAAAACA CAAAAGCCTGCA TCTT TGCAGGCTTTTG AAATGGATCTTTAAA TERM 3846 3253328 - 3253311 - R 100 -11.3 -5.02287 | opp_overlap 3253311, overlap 3253306 3253304 TACAAAAACACAAAA GCCTGCA TCTT TGCAGGC TTTTGAAATGGATCT TERM 3847 3253311 - 3253328 + r 100 -11.3 -4.15006 | opp_overlap 3253311 3253306 3253304 TACAAAAACACAAAA GCCTGCA TCTT TGCAGGC TTTTGAAATGGATCT gltD 3254780 - 3253359 - | glutamate synthase subunit beta gltB 3259336 - 3254855 - | glutamate synthase subunit alpha TERM 3848 3259061 - 3259082 + g 71 -4.4 -4.8143 | overlap 3259077 TACCGCAAAAATTTC GCTAAGTG TAATGT CACTAAGC TTTTTAGCTTCTTCA TERM 3849 3259556 - 3259531 - R 73 -8.3 -3.54424 | TCGCACTTTTTTAAA GCAGGCGAAAC GACG ATTTCGCATGC TAACTGAATTTTATG ACIAD3352 3260640 - 3259789 - | hypothetical protein aroB 3261738 - 3260650 - | 3-dehydroquinate synthase TERM 3850 3261557 - 3261586 + g 76 -10.3 -3.05521 | gap 1, opp_overlap 3261564, overlap 3261564 3261565 CAAACCGCCACCTGC TTATCAAG-TGCAT GTA ATGCATCTTGATAA TGTTGCAAATATAAT aroK 3262302 - 3261760 - | shikimate kinase ACIAD3355 3264510 - 3262339 - | putative outer membrane protein (ComQ) ACIAD3356 3265052 - 3264528 - | putative lipoprotein (ComL) ACIAD3357 3265789 - 3265052 - | putative membrane protein (ComO) ACIAD3359 3266424 - 3265786 - | putative membrane protein (ComN) ACIAD3360 3267446 - 3266421 - | putative membrane protein (ComM) TERM 3851 3267921 - 3267931 + G 82 -3.2 -5.42259 | overlap 3267910 3267908 GCTTTTCTGGCAGCA GAGG ATT CTTC TTTTTTTGAGCATAG TERM 3852 3269112 - 3269095 - g 73 -9.9 -2.90723 | opp_overlap 3269094 CCATGGTCAACGATA GCCCAAT CAGT ATTGGGC GTTGGTCGCCTAAAA TERM 3853 3270162 - 3270152 - g 79 -3.2 -5.33405 | overlap 3270157 CTCACCAAAGAAAAA TGAG ACG CCCA AACGAGGCGATGCAC ACIAD3361 3267648 - 3270206 + | putative penicillin binding protein (PonA) TERM 3854 3270213 - 3270233 + T 100 -14.1 -6.28401 | opp_overlap 3270213 GTGACATAAAAAAAA CAGCCATCA AAT TGATGGCTG TTTTTTTATTTTTTG TERM 3855 3270233 - 3270213 - T 100 -14.1 -6.02914 | opp_overlap 3270213 GTGACATAAAAAAAA CAGCCATCA AAT TGATGGCTG TTTTTTTATTTTTTG rrm 3271040 - 3270219 - | 23S ribosomal RNA G745 methyltransferase TERM 3856 3270275 - 3270294 + g 75 -5.8 -4.67354 | TCTGGAAACATGCGG TCAGTTTT ATAC AAGACTGA TTTTCTATCTCTGTT TERM 3857 3271062 - 3271076 + r 100 -12.8 -4.28069 | opp_overlap 3271062 TTTCCTAATAAAAAA GCCGGC GTG GCCGGC TTTCTTCAATTATAT TERM 3858 3271076 - 3271062 - R 100 -12.8 -5.4505 | opp_overlap 3271062 TTTCCTAATAAAAAA GCCGGC GTG GCCGGC TTTCTTCAATTATAT mraY 3272224 - 3271106 - | phospho-N-acetylmuramoyl-pentapeptide transferase murF 3273631 - 3272225 - | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase (UDP-MurNAc-pentapeptide synthetase) (D-alanyl-D-alanine-adding enzyme) TERM 3859 3273652 - 3273638 - R 70 -2.1 -5.28778 | AGTATGCATAAAAAA TCCTA ATGTG CAGGA TACGCAGAATGAACT murE 3275139 - 3273640 - | UDP-N-acetylmuramoylalanyl-D-glutamate-2, 6-diaminopimelate ligase TERM 3860 3273986 - 3273956 - G 78 -9.6 -3.64703 | TTTGCGCCATTCAAA GCGGCCTGCGTC ATAAGCG GACGCTTGCCGC GATCGCGATCTCCAC ftsI 3277012 - 3275147 - | septum formation, penicillin binding protein 3, peptidoglycan synthetase ftsL 3277328 - 3276996 - | cell division protein (in growth at septum) TERM 3861 3277048 - 3277034 - G 73 -7.1 -4.0825 | TTGGCAACGAAATAA CGGCA GTTTG TGCCG CAGGAGGTGAAAACA mraW 3278249 - 3277338 - | S-adenosylmethionine methyltransferase TERM 3862 3278581 - 3278606 + r 70 -6.9 -3.79668 | opp_overlap 3278581 ATCATGAAAGAAAAA CACGAATCGCA AAGT TGTAATTCGTG TTTAATGGATTCAAT TERM 3863 3278606 - 3278581 - R 89 -6.9 -5.34309 | opp_overlap 3278581 ATCATGAAAGAAAAA CACGAATCGCA AAGT TGTAATTCGTG TTTAATGGATTCAAT sbp 3279628 - 3278627 - | sulfate ABC transporter periplasmic substrate-binding protein ACIAD3370 3280003 - 3280305 + | signal peptide TERM 3864 3281024 - 3281038 + G 74 -10 -3.15544 | TATCATTTGGCCAAT GTGGTC GAT GACCAC TTAATGGAAATCACG TERM 3865 3281904 - 3281888 - g 81 -7.3 -4.58685 | overlap 3281889 AAAGTGTGGGAAAAA CTCAACG AAT CGTTGAA ATTGCCGAAAAATGA gltX 3280430 - 3281938 + | glutamyl-tRNA synthetase TERM 3866 3282203 - 3282185 - f 100 -11.7 -4.64657 | opp_overlap 3282185 CCAAATTCTGAAAAA GCCGCTG ACATA CAGCGGC TTTTTTTATTTCTGA TERM 3867 3282185 - 3282203 + F 100 -11.7 -6.02919 | opp_overlap 3282185 CCAAATTCTGAAAAA GCCGCTG ACATA CAGCGGC TTTTTTTATTTCTGA ACIAD3373 3282266 - 3282607 + | hypothetical protein TERM 3868 3282637 - 3282656 + T 95 -8.6 -5.76633 | opp_overlap 3282637 GAATATTTTTAAAAA CCATCAGT CAGT GCTGATGG TTTTTTTCTATATGC TERM 3869 3282656 - 3282637 - T 82 -7.9 -4.62302 | opp_overlap 3282637 GAATATTTTTAAAAA CCATCAG TCAGTG CTGATGG TTTTTTTCTATATGC czcD 3283567 - 3282644 - | cation efflux system protein TERM 3870 3283490 - 3283476 - G 75 -5.7 -4.61747 | TCAACAATCAGAAAA GTCAC GGTGA GTGAC AATGCGATCGTAAGC TERM 3871 3283605 - 3283618 + r 74 -2.3 -5.45802 | opp_overlap 3283617 TTTAAATCGAAAGTT GCGCT GGAT AACGC TTTTTATTTTAAAGC TERM 3872 3283662 - 3283632 - R 86 -10.6 -3.59979 | overlap 3283617 GCTTTTTATTTTAAA GCCTTCATGACACA CGA TATATCATGAAGAC TCATACTCAAACTGT TERM 3873 3283693 - 3283705 + r 82 -7.7 -4.54681 | ATTAATTGCTTGAAC CAGTC ACT GACTG TTGTTTTTCATTCAT czcA 3286870 - 3283679 - | RND divalent metal cation efflux transporter czcB 3288086 - 3286833 - | RND divalent metal cation efflux membrane fusion protein TERM 3874 3287578 - 3287592 + gr 71 -8.6 -3.13343 | TTCTCACGTTGATAG TCTTGC GCT GCAAGA TTGAGTGCTTCACGT czcC 3289489 - 3288086 - | outer membrane protein precursor TERM 3875 3288235 - 3288245 + g 93 -4 -5.78622 | TTTGCCATGCCTGTT TCAA GAG TTGA TTTTTTTTAAGCTGC TERM 3876 3289234 - 3289245 + g 78 -4.4 -5.17353 | GGCTTTGCCGCACAC TAGC ATTG GCTA TTTTTTGCTGGGTCT czcI 3289925 - 3289536 - | cation efflux system protein TERM 3877 3290013 - 3290038 + r 81 -9.1 -3.80855 | opp_overlap 3290018, overlap 3290018 CACGCTTATGGCATA AAAAACCAGCT CGAA AGCTGGTTTTG TTCATTTTTAGAAAA TERM 3878 3290033 - 3290018 - R 95 -9 -5.26316 | opp_overlap 3290013 3290018 TTATGGCATAAAAAA CCAGCT CGAA AGCTGG TTTTGTTCATTTTTA TERM 3879 3290018 - 3290033 + r 95 -9 -4.93177 | opp_overlap 3290018, overlap 3290013 TTATGGCATAAAAAA CCAGCT CGAA AGCTGG TTTTGTTCATTTTTA ACIAD3380 3291715 - 3290054 - | putative ABC transporter ATP-binding protein TERM 3880 3290833 - 3290855 + g 82 -3.4 -5.50723 | TCGAGTTCAGCTCTT CAAAACGC TCCATAC GCGCTTTG TTTTTCTTTTGCTGA TERM 3881 3291889 - 3291869 - R 84 -6.2 -5.36441 | opp_overlap 3291862 3291869 TCCTGATATAAAAAA TGCATGAC GCTAG ATCATGCA TTTTTAACTTATAGT TERM 3882 3291869 - 3291889 + r 74 -5.5 -4.78752 | opp_overlap 3291869, overlap 3291862 TCCTGATATAAAAAA TGCATGA CGCTAGA TCATGCA TTTTTAACTTATAGT poxB 3293657 - 3291936 - | pyruvate dehydrogenase (cytochrome) metY 3293919 - 3295202 + | homocysteine synthase TERM 3883 3295213 - 3295249 + F 89 -9.1 -4.24422 | gap 1, opp_overlap 3295210 3295222, overlap 3295222 TTTGAGCGTAAATTT TATAAAA-AACCTCTG CAATTT CAGAGGTTTTTTTATA TTTGCTTTATTATCG TERM 3884 3295222 - 3295239 + F 100 -7 -5.88197 | opp_overlap 3295222, overlap 3295213 AAATTTTATAAAAAA CCTCTG CAATTT CAGAGG TTTTTTTATATTTGC TERM 3885 3295239 - 3295222 - f 89 -7 -5.28826 | opp_overlap 3295222 3295213 AAATTTTATAAAAAA CCTCTG CAATTT CAGAGG TTTTTTTATATTTGC TERM 3886 3295318 - 3295301 - f 83 -4.9 -5.39905 | AGCAAATAATAAAAA TTAGAGC AATT ACTCTAA AAACATTTGTAATTT acr1 3295450 - 3296361 + | fatty acyl-CoA reductase (hexadecanal dehydrogenase,acylating) TERM 3887 3296368 - 3296401 + T 78 -10.6 -2.71364 | gap 1, opp_overlap 3296368 3296373 3296376, overlap 3296376 CACTGGTAAAATTTA TAAAAGAAGCCTCTC ATACC GAGAGGCTT-TTTTA TGGTTACGACCATCA TERM 3888 3296401 - 3296368 - T 83 -11.3 -2.75081 | gap 1, opp_overlap 3296368 3296376, overlap 3296373 3296376 CACTGGTAAAATTTA TAAAAGAAGCCTCTCA TAC CGAGAGGCTT-TTTTA TGGTTACGACCATCA TERM 3889 3296397 - 3296373 - T 93 -9.3 -4.54477 | opp_overlap 3296368 3296376, overlap 3296368 3296376 GTAAAATTTATAAAA GAAGCCTCTCA TAC CGAGAGGCTTT TTTATGGTTACGACC TERM 3890 3296376 - 3296394 + T 100 -10.3 -5.37345 | opp_overlap 3296373 3296368 3296376, overlap 3296368 AAATTTATAAAAGAA GCCTCTC ATACC GAGAGGC TTTTTTATGGTTACG TERM 3891 3296394 - 3296376 - T 100 -11 -4.35693 | opp_overlap 3296376 3296368, overlap 3296373 3296368 AAATTTATAAAAGAA GCCTCTCA TAC CGAGAGGC TTTTTTATGGTTACG ACIAD3384 3298622 - 3296424 - | putative sulfate permease TERM 3892 3297098 - 3297110 + g 70 -7.7 -3.65902 | TCGCATCATCCAGTT CAGCA TAA TGCTG TTTAAATCCAATCAG TERM 3893 3298206 - 3298177 - G 75 -5.1 -4.79223 | gap 1, overlap 3298185 TGAGACCAGGAAAAA TCAGATAACCCCAT TAA ATAGGGG-ATCTGA GTCATCATGAGAATG TERM 3894 3298361 - 3298344 - G 100 -12.7 -5.28561 | opp_overlap 3298342 3298341 AATACACAATAAAAA GGCGGCA TAAT TGCCGCC AAGTTGCTCTAACTG TERM 3895 3298847 - 3298874 + r 100 -15.8 -4.57341 | opp_overlap 3298847 3298854, overlap 3298854 GCGTAATGCACATAA GAAAAAACCACC CGAA GGTGGTTTTTTC TTTTTAAACAGGATT TERM 3896 3298874 - 3298847 - R 100 -15.8 -3.551 | opp_overlap 3298847 3298854, overlap 3298854 GCGTAATGCACATAA GAAAAAACCACC CGAA GGTGGTTTTTTC TTTTTAAACAGGATT TERM 3897 3298854 - 3298867 + r 100 -8.1 -5.93252 | opp_overlap 3298847 3298854, overlap 3298847 GCACATAAGAAAAAA CCACC CGAA GGTGG TTTTTTCTTTTTAAA TERM 3898 3298867 - 3298854 - R 93 -8.1 -5.60689 | opp_overlap 3298854 3298847, overlap 3298847 GCACATAAGAAAAAA CCACC CGAA GGTGG TTTTTTCTTTTTAAA ACIAD3386 3301284 - 3298894 - | hypothetical protein TERM 3899 3299381 - 3299403 + g 100 -9.8 -4.59773 | opp_overlap 3299380 3299384, overlap 3299382 TTTGCGGTACGGAAC TCAGGACGTG GGT CACGACCTGG TTTTTCAAGCTCGGC TERM 3900 3299382 - 3299402 + g 81 -11.1 -3.35542 | opp_overlap 3299380 3299384, overlap 3299381 TTGCGGTACGGAACT CAGGACGTG GGT CACGACCTG GTTTTTCAAGCTCGG ompR 3301865 - 3302629 + | osmolarity response regulator TERM 3901 3302720 - 3302730 + G 70 -5.4 -4.42653 | opp_overlap 3302718 3302720 GAACGTAAGCGAACA CGTT GGG AACG TTTTCTAGATAAAAT envZ 3302651 - 3304108 + | sensory histidine kinase in two-component regulatory system with OmpR TERM 3902 3304247 - 3304232 - f 79 -4 -5.41143 | CATTTTTTAAAAAAA TTAGAC CTTA GCCTAA CACCCCGTCAAAACC TERM 3903 3304511 - 3304485 - g 71 -2.2 -5.08255 | ACGTGCAAAACAAAA CCCGTTAAAAAT TAC ATTAATTACGGG TGCGAGCTTAGGGAA ACIAD3390 3304318 - 3305832 + | putative acetyl-CoA hydrolase/transferase TERM 3904 3305856 - 3305874 + F 100 -9.6 -5.28176 | opp_overlap 3305856 TGCCTTTCACAATCA GCACTCTA AAT TAGGGTGC TTTTTTGTACCTGAA ACIAD3391 3305963 - 3306382 + | putative acetyltransferase ACIAD3392 3307652 - 3306390 - | putative long-chain fatty acid transport protein ACIAD3393 3308508 - 3307777 - | putative SAM-dependent methyltransferase TERM 3905 3308619 - 3308599 - R 100 -16.9 -6.02914 | opp_overlap 3308599 GTCAGACAAAAAAAA GCCCCTGAC TGA GTCAGGGGC TTTTTTGAATATGGT TERM 3906 3308599 - 3308619 + r 100 -16.9 -5.13473 | opp_overlap 3308599 GTCAGACAAAAAAAA GCCCCTGAC TGA GTCAGGGGC TTTTTTGAATATGGT TERM 3907 3308665 - 3308679 + r 73 -8.6 -3.2614 | opp_overlap 3308665 CGAACTGCCGACACA CGGATT TTC AATCCG TTGCTCTACCGACTG TERM 3908 3308701 - 3308715 + r 74 -9.2 -3.0395 | overlap 3308703 TACCGACTGAGCTAT CGCGCC GAT GGCGTG TATTAAGCCGTATCT TERM 3909 3308814 - 3308796 - R 100 -11.8 -5.75342 | TTCGCCCAAAAAAAA TCCCTGAT GGG ATCAGGGA TTAGAAACTTTCAAA TERM 3910 3308867 - 3308881 + r 73 -8.6 -3.2614 | opp_overlap 3308867 CGAACTGCCGACACA CGGATT TTC AATCCG TTGCTCTACCGACTG ACIAD3394 3309397 - 3309014 - | hypothetical protein TERM 3911 3309831 - 3309844 + G 71 -4.5 -4.58085 | overlap 3309832 GTAGTCGTAGATCTG TCTGG TCGT CCAGG TTTATTTATGGATAT TERM 3912 3309905 - 3309922 + G 74 -6.3 -4.42386 | TGATGTGGATCTGTT CTCTGAA TTTT TTCAGGG TTTTGTCAATCACGC hisB 3309498 - 3310091 + | imidazoleglycerol-phosphate dehydratase hisH 3310094 - 3310711 + | imidazole glycerol phosphate synthase subunit HisH TERM 3913 3310749 - 3310723 - f 81 -11 -2.77148 | opp_overlap 3310723, overlap 3310720 3310725 3310729 3310742 TTGATCAATACATCA GATCAAGCTG TCGAATG CAGCTTGATC TTTTCAAAAAAAATC TERM 3914 3310723 - 3310749 + F 93 -11.7 -4.07885 | opp_overlap 3310723 3310720 3310725 3310729 3310742 TTGATCAATACATCA GATCAAGCTGT CGAAT GCAGCTTGATC TTTTCAAAAAAAATC TERM 3915 3311133 - 3311156 + G 75 -5.3 -4.87893 | opp_overlap 3311138, overlap 3311129 TTACATGACCGCAAC CATAATGGC TGGTTT GCCATTCTG TTTTTCATTCCCATT ACIAD3397 3310863 - 3311432 + | hypothetical protein hisA 3311544 - 3312275 + | 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase TERM 3916 3312329 - 3312280 - T 80 -10.3 -3.07522 | opp_overlap 3312283 3312296, overlap 3312269 3312296 ATACGCTTTAATACA TTTAAGCTAAAAAAAAGATGCCT CACG AGGCATCTTTTTTTTATCTCTTA TCGTTTATCCATTTG TERM 3917 3312283 - 3312326 + T 100 -14.2 -3.65317 | opp_overlap 3312269 3312280 3312296, overlap 3312296 CGCTTTAATACATTT AAGCTAAAAAAAAGATGCCT CACG AGGCATCTTTTTTTTATCTC TTATCGTTTATCCAT TERM 3918 3312296 - 3312313 + T 100 -9.9 -6.08563 | opp_overlap 3312296 3312280, overlap 3312283 TTAAGCTAAAAAAAA GATGCCT CACG AGGCATC TTTTTTTTATCTCTT TERM 3919 3312313 - 3312296 - T 100 -9.9 -5.86332 | opp_overlap 3312283 3312296, overlap 3312280 TTAAGCTAAAAAAAA GATGCCT CACG AGGCATC TTTTTTTTATCTCTT ACIAD3399 3316326 - 3312334 - | putative peptide synthetase TERM 3920 3314120 - 3314130 + g 71 -6.8 -4.18762 | overlap 3314117 TCGTGACCAATTTTG GCAC CCA GTGC TTTTAAATAGAGATT TERM 3921 3316577 - 3316565 - R 76 -2.7 -5.48163 | AAACAAAGTAAAAAA TGAAA TTT TTCCA AGATCTTGTTCTGCA ACIAD3400 3318398 - 3316677 - | ABC transporter ATP-binding protein TERM 3922 3317136 - 3317151 + g 74 -4 -4.95155 | overlap 3317138 CTCGACTGAAAATGC TTTGGA AATC TCCAGA TTTTTATAATATAAA TERM 3923 3317521 - 3317509 - G 95 -7.7 -5.13722 | opp_overlap 3317509 CTGATCAAAACAAAA TCACC CGA GGTGA TTTGCTGAGTTTGAG TERM 3924 3317509 - 3317521 + g 72 -7.7 -3.82097 | opp_overlap 3317509 CTGATCAAAACAAAA TCACC CGA GGTGA TTTGCTGAGTTTGAG TERM 3925 3317953 - 3317936 - G 78 -4.2 -5.22006 | opp_overlap 3317936 CGAGCAGAATAAAAA GTGAAA ATGTCA TTTCAC TTAATGCCGACCCAC ACIAD3401 3318951 - 3318556 - | putative transmembrane protein ACIAD3402 3319615 - 3318989 - | putative cold shock protein ACIAD3403 3320626 - 3319628 - | homoserine kinase TERM 3926 3321359 - 3321373 + G 82 -8.6 -4.25074 | GTGGTGCAGATGCGG TACTGG CAG CCAGTA TTTTCCACTTTGGTC hisF 3320641 - 3321450 + | imidazole glycerol phosphate synthase subunit HisF ACIAD3405 3322202 - 3321561 - | hypothetical protein TERM 3927 3322722 - 3322738 + G 73 -5.1 -4.58685 | overlap 3322723 3322731 CCGATGAAATTGCGA TTGCACT GAT GGTGCAG TTTTTGCAGCAGTTT TERM 3928 3323286 - 3323271 - g 78 -10.4 -3.31144 | overlap 3323256 TGTGGAGCGGTACAA CGCCAC AACA GTGGCG TGAACAGCATGATAA ACIAD3406 3322298 - 3323308 + | hypothetical protein ACIAD3407 3323574 - 3323323 - | hypothetical protein ACIAD3408 3324727 - 3323651 - | putative DNA/RNA non-specific endonuclease G protein TERM 3929 3324767 - 3324757 - H 84 -5.4 -5.56372 | opp_overlap 3324766 AAACCAAAAGAAAAA GCTT AAC AAGC CTGGTTTGGGCTGTA ACIAD3411 3324985 - 3325380 + | hypothetical protein TERM 3930 3325436 - 3325390 - T 83 -10.6 -3.28907 | gap 2, opp_overlap 3325403, overlap 3325392 3325403 GAATAAAATCTAATA TA-CCCA-TAAAAAACCAAGGC CTTTT GCCTTGGTTTTTTACTGAGCTA ACTTGCGTCGTCATA TERM 3931 3325433 - 3325392 - T 95 -14.8 -3.19007 | gap 1, opp_overlap 3325403, overlap 3325390 3325403 ATAAAATCTAATATA CCCA-TAAAAAACCAAGGC CTTTT GCCTTGGTTTTTTACTGAG CTAACTTGCGTCGTC TERM 3932 3325421 - 3325403 - T 100 -10.3 -5.29782 | opp_overlap 3325403, overlap 3325392 3325390 TATACCCATAAAAAA CCAAGGC CTTTT GCCTTGG TTTTTTACTGAGCTA TERM 3933 3325403 - 3325421 + T 100 -10.3 -5.15634 | opp_overlap 3325403 3325392 3325390 TATACCCATAAAAAA CCAAGGC CTTTT GCCTTGG TTTTTTACTGAGCTA trkD 3327336 - 3325456 - | KUP family potassium transport system low affinity TERM 3934 3327586 - 3327608 + H 93 -7.8 -5.76633 | opp_overlap 3327586 ACCGTAGTTCAAAAA GCTTGATCTT AAA AAGATTGAGC TTTTTTTATGTCTGA TERM 3935 3327676 - 3327641 - H 78 -7.6 -4.10161 | overlap 3327651 CATTACGGCGCAAAA CGGTAGCATACCAACA ACTA TGTTGGTATCAAACCG AAAAATTAAAATTTC ACIAD3414 3327660 - 3327989 + | hypothetical protein TERM 3936 3328087 - 3328062 - T 85 -4.1 -5.63517 | opp_overlap 3328062 CCGCCAAATAAAAAA CCAATTACTTA CGAA TGAATAATTGG TTTAAAATCAATGAA TERM 3937 3328131 - 3328105 - T 84 -8.2 -4.5528 | opp_overlap 3328109, overlap 3328109 TAAAATCAATGAAAA TAAATTTTGTCT CTT AGCCAAAATTTA AATGGCTGAGCATTC TERM 3938 3328127 - 3328109 - T 70 -4.6 -4.78981 | opp_overlap 3328109, overlap 3328105 ATCAATGAAAATAAA TTTTGTCT CTT AGCCAAAA TTTAAATGGCTGAGC ACIAD3415 3328456 - 3328178 - | hypothetical protein ACIAD3418 3328885 - 3329118 + | hypothetical protein ACIAD3419 3329180 - 3329746 + | hypothetical protein ACIAD3421 3331675 - 3330230 - | putative outer membrane protein precursor TERM 3939 3331009 - 3331028 + g 71 -5 -4.61633 | overlap 3331010 ATTGATTGTGTGTGA GCTGCAAA AATT TTTGCAGG TTTTTCAGGCTCTCT mdtC 3334867 - 3331691 - | RND family multidrug transporter outer membrane protein TERM 3940 3333749 - 3333773 + g 72 -10 -2.77013 | overlap 3333748 ATACATGAGGCCGAA GGTGCCAATC AGCGA GATCGGCACC GTTATTGCAGGAATC mdtB 3338025 - 3334864 - | RND family multidrug transporter TERM 3941 3335342 - 3335326 - G 70 -10.1 -2.53409 | overlap 3335325 CAGCAACGCACCAAT CCCTGCC GAT GGCAAGG TCGATAAAATGGTTA TERM 3942 3336742 - 3336754 + g 77 -10.5 -3.12327 | overlap 3336739 TAATGCCGCCTGCAT GGGCG ACT CGCCC TGTTCGATATAGCGA mdtA 3339333 - 3338035 - | membrane protein inolved in drug resistance TERM 3943 3338309 - 3338297 - G 71 -4.7 -4.61199 | ACTTTATAGACAAAA GAGCC ATG GGCAC CCAGTTGTAATGCGA TERM 3944 3338479 - 3338493 + g 100 -10 -4.80396 | ATCCAGCGCCACGAG CTTGCC ATC GGCAAG TTTTTGCGTATTTTG ACIAD3425 3341326 - 3339596 - | hypothetical protein TERM 3945 3339917 - 3339930 + g 73 -3.9 -5.04385 | TTTAATTTTGACCAT TTGTT CTTG AACAA TTTTTTGACGATATG TERM 3946 3340887 - 3340903 + g 74 -4.4 -5.00138 | TATCCTCCTCCCAAG CCGGTT GTATA AATCGG TTTTTCATTTAAATC ACIAD3426 3342386 - 3341328 - | hypothetical protein TERM 3947 3341845 - 3341858 + g 75 -2.3 -5.3658 | AAACCGGCTTGATCT TCGCC TTTA GCCGA TTTTATTTTTATACT ACIAD3427 3345145 - 3342407 - | putative VGR-like protein TERM 3948 3343597 - 3343586 - G 85 -5.8 -5.14965 | opp_overlap 3343586 3343584 ATTTCCATCAAAAAA GTCG ATTA CGAC TATTTCACCTACACG TERM 3949 3345210 - 3345220 + r 76 -4 -5.27938 | TCTATCTCAATTTTG GATA TTT TATC TTTTTGTTTCAGGCT ACIAD3428 3345845 - 3345333 - | hypothetical protein ACIAD3429 3346944 - 3345832 - | putative peptidase ACIAD3430 3350133 - 3347071 - | putative type I restriction-modification system (HsdR) TERM 3950 3348433 - 3348448 + g 70 -2.6 -5.06103 | AACAAAACGAGCCAT TAAAGC TTTG GTTTTA TTTTTTGCAAGTTCT ACIAD3431 3351500 - 3350154 - | putative type I restriction-modification system specificity determinant for hsdM and hsdR (HsdS) ACIAD3432 3353752 - 3351497 - | putative type I restriction-modification system DNA methylase (HsdM) ACIAD3434 3354355 - 3353762 - | putative restriction-modification system TERM 3951 3354143 - 3354122 - G 100 -14.5 -3.09452 | ACCTTTGAATACATA TGCTCGTGG TTCT CCACGAGCA ACAACAATGAGTGAA TERM 3952 3354522 - 3354484 - R 86 -10.6 -3.57561 | gap 2, opp_overlap 3354494 TCTCAACTTTTCAAA TCATGCAGT-A-GAGCTC GTACT GAGCTCTTTACTGCATGA AGTTACTATACGATG TERM 3953 3354494 - 3354510 + r 79 -8.7 -3.76402 | opp_overlap 3354484 TCAAATCATGCAGTA GAGCTCG TAC TGAGCTC TTTACTGCATGAAGT ACIAD3436 3356537 - 3354594 - | hypothetical protein TERM 3954 3355692 - 3355702 + g 75 -5.4 -4.89562 | AACATCATACCCATA CTGA CTA TCAG TTTTATTCATTTTAA TERM 3955 3356573 - 3356563 - R 79 -4 -5.54907 | opp_overlap 3356563 TGGATAAAATAAAAA CAAT TAT ATTG ATTTAATCTCTTTAA ACIAD3437 3357605 - 3356670 - | hypothetical protein TERM 3956 3356960 - 3356977 + g 84 -2.7 -5.60993 | AAATACCGTCTTTTA TATATGC TTTC GCATCTA TTTTTTTATCACGGC ACIAD3440 3358362 - 3359021 + | hypothetical protein TERM 3957 3359083 - 3359054 - T 100 -10.1 -4.57073 | opp_overlap 3359057 3359060, overlap 3359057 GATCGCCTGTAAAAA CAAGAAGTGACCC TTCT GGATCACTTCTTT ACCGCATTAAGGCTG TERM 3958 3359080 - 3359057 - T 100 -11.8 -4.40561 | opp_overlap 3359057 3359060, overlap 3359054 CGCCTGTAAAAACAA GAAGTGACCC TTCT GGATCACTTC TTTACCGCATTAAGG TERM 3959 3359057 - 3359080 + T 82 -9.6 -3.57561 | opp_overlap 3359057 3359054, overlap 3359060 CGCCTGTAAAAACAA GAAGTGACCC TTCT GGATCACTTC TTTACCGCATTAAGG kef 3360931 - 3359090 - | glutathione-regulated potassium-efflux system protein (K(+)/H(+) antiporter) TERM 3960 3360149 - 3360129 - G 73 -9.7 -3.04322 | CGGAACGGCTCAATA TCGGCTTCA ATC TGATGCCGA AAAGTCGATTCAGAC ACIAD3442 3362031 - 3361213 - | putative methyltransferase ACIAD3443 3363405 - 3362059 - | hypothetical protein TERM 3961 3363725 - 3363754 + r 100 -13.7 -4.87133 | opp_overlap 3363727, overlap 3363727 TAAGACTACAGCGAA AAGCCCTGTATCA GGTT TGATACAGGGCTG TTTTATTTAAAGCCT TERM 3962 3363727 - 3363752 + r 100 -16.3 -4.05678 | opp_overlap 3363727, overlap 3363725 AGACTACAGCGAAAA GCCCTGTATCA GGTT TGATACAGGGC TGTTTTATTTAAAGC TERM 3963 3363752 - 3363727 - R 100 -16.3 -4.2535 | opp_overlap 3363727 3363725 AGACTACAGCGAAAA GCCCTGTATCA GGTT TGATACAGGGC TGTTTTATTTAAAGC ACIAD3444 3364751 - 3363798 - | putative pirin-like protein TERM 3964 3364810 - 3364833 + r 93 -11.1 -4.0616 | opp_overlap 3364810 CATAGAAATAAAAAA CCCGTTATG AATGGG CATAACGGG TTTCTCGTTCAGATC TERM 3965 3364833 - 3364810 - R 100 -11.1 -5.76237 | opp_overlap 3364810 CATAGAAATAAAAAA CCCGTTATG AATGGG CATAACGGG TTTCTCGTTCAGATC TERM 3966 3364840 - 3364854 + r 77 -8.6 -3.61715 | CATAACGGGTTTCTC GTTCAG ATC CTGAAC TTATTCAGAAAGATC gabD 3366303 - 3364855 - | NADP+-dependent succinate semialdehyde dehydrogenase TERM 3967 3366251 - 3366231 - G 77 -11.2 -2.73681 | opp_overlap 3366236, overlap 3366233 CATTCACTTCAATCA CAGCACCA GATGT TGGTGCTG TAAATGAAATATCAG gabT 3367595 - 3366309 - | 4-aminobutyrate aminotransferase, PLP-dependent TERM 3968 3367532 - 3367549 + g 70 -7.7 -3.65535 | gap 1, opp_overlap 3367532, overlap 3367535 3367539 ACCACTGGCACATTA CGCCCACG CCA CGTGG-CG TTGCTTGTTGTTTAC ACIAD3447 3367748 - 3369247 + | GntR family transcriptional regulator TERM 3969 3369281 - 3369298 + T 100 -9.9 -5.1925 | opp_overlap 3369281 TTTCCCATAAAAAAA GAACCTC TTAT GAGGTTC TTTTTTAAATTCTAA TERM 3970 3369298 - 3369281 - T 100 -9.9 -5.60993 | opp_overlap 3369281 TTTCCCATAAAAAAA GAACCTC TTAT GAGGTTC TTTTTTAAATTCTAA gabP 3370756 - 3369317 - | gamma-aminobutyrate permease TERM 3971 3371255 - 3371234 - R 100 -11.7 -5.60993 | opp_overlap 3371234 3371237 TTTCCTATAAAAAAA GAACCTGAT ATAC ATCAGGTTC TCTCTAATCAACCAA TERM 3972 3371234 - 3371255 + r 83 -11.7 -2.94099 | opp_overlap 3371234, overlap 3371237 TTTCCTATAAAAAAA GAACCTGAT ATAC ATCAGGTTC TCTCTAATCAACCAA TERM 3973 3371237 - 3371252 + r 71 -7.6 -3.61902 | opp_overlap 3371234, overlap 3371234 CCTATAAAAAAAGAA CCTGAT ATAC ATCAGG TTCTCTCTAATCAAC ssb 3371870 - 3371292 - | ssDNA-binding protein controls activity of RecBCD nuclease ACIAD3450 3373287 - 3371923 - | MFS family transporter TERM 3974 3372269 - 3372251 - G 85 -4.4 -5.42259 | opp_overlap 3372265 GTACCGCCAAAAAAA GCGCCCAG AAA CTGGCTGC TGGCATTAATCCCCA TERM 3975 3372974 - 3372942 - G 76 -9.9 -3.39749 | CCAATAATGCCATAA CTACCGCAGATACCG CGC CAGCACCTGCAATAG CACGTCCAATAATTA TERM 3976 3373393 - 3373378 - R 100 -10.4 -5.29782 | opp_overlap 3373378, overlap 3373365 CACACCCATAAAAAA GGGTGC CTAT GCACCC TTTATTGTATTGAGT TERM 3977 3373378 - 3373393 + r 100 -10.4 -4.46675 | opp_overlap 3373365 3373378 CACACCCATAAAAAA GGGTGC CTAT GCACCC TTTATTGTATTGAGT ACIAD3451 3374507 - 3373425 - | putative integral membrane protein ACIAD3452 3374703 - 3375374 + | TenA family transcriptional activator glpM 3375823 - 3375479 - | membrane protein required for efficient alginate biosynthesis ACIAD3454 3375946 - 3376383 + | hypothetical protein TERM 3978 3376422 - 3376439 + F 100 -9.9 -5.626 | TGATTTTTGACTCCA GCACAGT ATCC ACTGTGC TTTTTTTATCAGCTA TERM 3979 3378392 - 3378415 + G 79 -11 -2.92667 | overlap 3378390 AAATCATGCTGACTC CCTGACTGGT CAAT ACCTGTCAGG TGCTTTAAAAATTGA uvrA 3376566 - 3379463 + | excinuclease ABC subunit A TERM 3980 3379494 - 3379510 + F 93 -8 -5.76237 | opp_overlap 3379494 AATTTTATGGTAAAA CGGTGA TTCAT TCACCG TTTTTTATTTATATG TERM 3981 3379510 - 3379494 - f 81 -8 -4.14511 | opp_overlap 3379494 AATTTTATGGTAAAA CGGTGA TTCAT TCACCG TTTTTTATTTATATG ACIAD3456 3379496 - 3380782 + | hypothetical protein ACIAD3457 3382575 - 3380833 - | putative GGDEF family protein TERM 3982 3381587 - 3381605 + g 70 -7.4 -3.87075 | overlap 3381588 3381601 3381602 GCATATTCTTGTTGC TCAGCTTG GGC CAGGCTGG TTTGTACCAGATAAT TERM 3983 3382817 - 3382848 + H 100 -10.2 -5.33921 | overlap 3382816 TCTGCATCCTTTTAT TGCCTAGCAGTTTT TCAA ATATCTGCTAGGCA TTTTTTCATTAATTT TERM 3984 3382997 - 3382976 - H 100 -10.9 -5.96219 | TACGCATAAAAAAAA CCCAGCCTT GGGG AAAGCTGGG CATATAAAACAAATA TERM 3985 3383773 - 3383783 + G 71 -6.8 -4.15044 | TCTAAAGGCCCTTTA GCTG AAG CAGC TTTCTTAAACCAAGC ACIAD3459 3383572 - 3384495 + | hypothetical protein TERM 3986 3384536 - 3384521 - T 95 -9 -5.28176 | opp_overlap 3384521 TCGACCTATAAAAAA GGACTC TTAT GAGTCC TTTTTTACGTCTGAA TERM 3987 3384521 - 3384536 + T 95 -9 -5.1287 | opp_overlap 3384521 TCGACCTATAAAAAA GGACTC TTAT GAGTCC TTTTTTACGTCTGAA ACIAD3460 3386537 - 3384555 - | putative high affinity choline transport protein (Bet-like) TERM 3988 3385732 - 3385722 - G 82 -6.8 -4.87892 | CGTGAAGAAAACAAA CGCT AAA AGCG TGACAGCCAAGACCA ACIAD3461 3387381 - 3386689 - | hypothetical protein TERM 3989 3386797 - 3386785 - G 77 -4.9 -5.06451 | CATCACGCCAAAAAA CATTT GTA AAATG GCAATCACTCTTGCC ACIAD3462 3387579 - 3387956 + | hypothetical protein TERM 3990 3387950 - 3387986 + T 89 -11.1 -3.63875 | opp_overlap 3387951 3387954 3387962, overlap 3387954 3387962 TCAGGTCTATACCAA GCAATAAAAAAAGCGCT CTA AGCGCTTTTTTTATTAA ATTTATTTTTTAGTG TERM 3991 3387985 - 3387951 - T 100 -16.8 -2.55668 | opp_overlap 3387950 3387954 3387962, overlap 3387954 3387962 CAGGTCTATACCAAG CAATAAAAAAAGCGCT CTA AGCGCTTTTTTTATTA AATTTATTTTTTAGT TERM 3992 3387954 - 3387982 + T 100 -16.3 -3.48853 | opp_overlap 3387951 3387954 3387962, overlap 3387950 3387962 GTCTATACCAAGCAA TAAAAAAAGCGCT CTA AGCGCTTTTTTTA TTAAATTTATTTTTT TERM 3993 3387982 - 3387954 - T 100 -16.3 -3.43071 | opp_overlap 3387954 3387950 3387962, overlap 3387951 3387962 GTCTATACCAAGCAA TAAAAAAAGCGCT CTA AGCGCTTTTTTTA TTAAATTTATTTTTT TERM 3994 3387962 - 3387974 + T 100 -9.1 -5.83226 | opp_overlap 3387954 3387951 3387962, overlap 3387954 3387950 CAAGCAATAAAAAAA GCGCT CTA AGCGC TTTTTTTATTAAATT TERM 3995 3387974 - 3387962 - T 100 -9.1 -5.87996 | opp_overlap 3387962 3387954 3387950, overlap 3387954 3387951 CAAGCAATAAAAAAA GCGCT CTA AGCGC TTTTTTTATTAAATT actP 3389732 - 3387996 - | acetate permease ACIAD3464 3390045 - 3389713 - | hypothetical protein TERM 3996 3390063 - 3390080 + H 88 -6.9 -4.88129 | TCTACTCCTTATATC GCGGCCA TCGT TGGGCGC TTTTTAATCCTTTTT TERM 3997 3392490 - 3392507 + G 78 -9.9 -3.55801 | opp_overlap 3392487 AACCCGATTGAAGGT GGTGGTT TTGC AACCACC TTTGCCGACATTACT ACIAD3465 3390195 - 3393725 + | putative two-component sensor ACIAD3468 3394100 - 3394867 + | hypothetical protein TERM 3998 3394909 - 3394892 - T 100 -9.9 -4.36914 | opp_overlap 3394892 TTTCTCTGTATAAAA TAGGGAG CATG CTCCCTA TTTTTCTTGATCAAA TERM 3999 3394892 - 3394909 + T 100 -9.9 -5.1356 | opp_overlap 3394892 TTTCTCTGTATAAAA TAGGGAG CATG CTCCCTA TTTTTCTTGATCAAA ACIAD3469 3395590 - 3394940 - | putative two-component response regulator TERM 4000 3395419 - 3395406 - G 77 -4.5 -4.92314 | ACCAATGCAGAAAAA CCTGA CGCC CCAGG CAAATTCAAATCAAG msuE 3395965 - 3396699 + | NADH-dependent FMN reductase ACIAD3471 3396718 - 3397836 + | putative sulfonate monooxygenase (MsuD) TERM 4001 3397885 - 3397908 + T 84 -6.7 -5.11033 | opp_overlap 3397887, overlap 3397887 ATACAAGAATAACTC AACCCCAAG ACTCGG CTTGGGGTC TTTTTTAACATTATC TERM 4002 3397887 - 3397906 + T 89 -9.3 -4.17355 | opp_overlap 3397887, overlap 3397885 ACAAGAATAACTCAA CCCCAAG ACTCGG CTTGGGG TCTTTTTTAACATTA TERM 4003 3397906 - 3397887 - T 79 -9.3 -3.34232 | opp_overlap 3397887 3397885 ACAAGAATAACTCAA CCCCAAG ACTCGG CTTGGGG TCTTTTTTAACATTA ACIAD3472 3398335 - 3397928 - | putative transcriptional regulator (Lrp-like) TERM 4004 3398895 - 3398908 + G 71 -2.3 -5.09225 | TTAACTTCTGCTCGC GACGT TCAA ACGGC TTTTTTAGCTGCGCT ACIAD3473 3398433 - 3398972 + | putative isochorismatase ACIAD3474 3400200 - 3398998 - | putative FMNH2-dependent monooxygenase TERM 4005 3400313 - 3400279 - R 74 -5.8 -4.46072 | gap 2, opp_overlap 3400279, overlap 3400281 3400282 TTCAACAAATATAAA GACTTCCCTGCAAGTC TATTC GGCTTGCAGGG-AG-C ATGACTATGATGTGG TERM 4006 3400312 - 3400281 - R 81 -9.5 -3.82276 | gap 1, opp_overlap 3400279, overlap 3400279 3400282 CAACAAATATAAAGA CTTCCCTGCAAGTC TATTC GGCTTGCAGGG-AG CATGACTATGATGTG TERM 4007 3400312 - 3400282 - R 76 -9.7 -2.87739 | opp_overlap 3400279, overlap 3400281 3400279 AACAAATATAAAGAC TTCCCTGCAAGTC TATTC GGCTTGCAGGGAG CATGACTATGATGTG acs 3402279 - 3400318 - | acetyl-CoA synthetase TERM 4008 3400980 - 3400966 - G 86 -5.6 -5.27779 | overlap 3400968 TTGAACACCAAAAAA TGGGCG TGT CGCCGA TCCTGGTTTTAATGC ACIAD3476 3402570 - 3403154 + | hypothetical protein ACIAD3477 3403247 - 3404230 + | hypothetical protein ACIAD3478 3404926 - 3404219 - | hypothetical protein TERM 4009 3404274 - 3404303 + g 80 -6.4 -4.7497 | gap 1, opp_overlap 3404273 TCAGTTCTTAAAATC CGGCTGCCCAAGT GATAA GCCTGG-CAGCCG TTTTTAATCAGTAAA kdtA 3406206 - 3404923 - | 3-deoxy-D-manno-2-octulosonate transferase ACIAD3480 3406376 - 3406567 + | hypothetical protein ACIAD3481 3408050 - 3406776 - | putative flavoprotein involved in K+ transport ACIAD3482 3409376 - 3408579 - | hypothetical protein ACIAD3483 3410718 - 3409558 - | hypothetical protein TERM 4010 3410540 - 3410522 - G 75 -8.2 -3.81339 | GAGGCATAATCTAAA TTGATACG TGC CGCATCAA ACGTCAATTTATGAT ACIAD3484 3411661 - 3410786 - | arginine/ornithine ABC transporter periplasmic substrate-binding protein TERM 4011 3411272 - 3411289 + g 73 -2.7 -5.18357 | gap 1, overlap 3411275 TTCACGTGTCATGTA GTACGGCA CCA TGTCG-AC TTTTTTCATACGTTC TERM 4012 3411980 - 3411991 + G 73 -5.8 -4.45544 | opp_overlap 3411980 3411979 TTTCTCGTATTAAAG CCAG TGAT CTGG TTTTGGTTGATGCAG ACIAD3485 3411814 - 3412539 + | hypothetical protein TERM 4013 3412582 - 3412551 - T 91 -11.8 -3.87869 | opp_overlap 3412553 3412559, overlap 3412553 TTAAGTGCTTAGAAA TAGTTAAATCGAAG CACG CTTCGATTTAACTT ATGGTTTGATGATGG TERM 4014 3412580 - 3412553 - T 100 -14.4 -3.52678 | opp_overlap 3412553 3412559, overlap 3412551 AAGTGCTTAGAAATA GTTAAATCGAAG CACG CTTCGATTTAAC TTATGGTTTGATGAT TERM 4015 3412553 - 3412580 + T 100 -14.4 -3.63251 | opp_overlap 3412553 3412551, overlap 3412559 AAGTGCTTAGAAATA GTTAAATCGAAG CACG CTTCGATTTAAC TTATGGTTTGATGAT TERM 4016 3412559 - 3412574 + T 73 -7.6 -3.83756 | opp_overlap 3412553 3412551, overlap 3412553 TTAGAAATAGTTAAA TCGAAG CACG CTTCGA TTTAACTTATGGTTT ACIAD3486 3413486 - 3412617 - | putative dioxygenase ACIAD3487 3414358 - 3413513 - | amino acid ABC transporter periplasmic substrate-binding protein TERM 4017 3414506 - 3414489 - R 74 -3.4 -5.24989 | opp_overlap 3414489 GCACACATCAAAAAA GCCATC AAGAAA AATGGC CTTTATATGAAAATA ACIAD3488 3416070 - 3414553 - | amino acid ABC transporter ATP-binding protein TERM 4018 3415667 - 3415652 - G 74 -4.6 -4.84492 | opp_overlap 3415652, overlap 3415654 GGAATCACAATAAAA CGCTGG ATAC CCAGAG ATTTCATCCCCAACG TERM 4019 3416315 - 3416295 - R 77 -9.8 -3.01924 | GAGCGTCCCGCAAGA TCATGCTG TCTGG CAGCATGA TCCAGAGCTAATCAT argE 3417470 - 3416331 - | acetylornithine deacetylase ACIAD3490 3418457 - 3417471 - | putative transcriptional regulator TERM 4020 3417594 - 3417615 + g 75 -3 -5.09426 | GCTAATAAATGCCTG TGCCAC CGTGTTTAAT GTGGCA TTTTTTGCAGTTGCC TERM 4021 3418419 - 3418394 - G 78 -9.8 -3.53366 | CAGAGGCAATGATAA TGCTGCCACT TTCAGC AGTGGCAACA AAATATTGTATTTGA ACIAD3492 3419171 - 3418494 - | hypothetical protein ACIAD3493 3419602 - 3419180 - | hypothetical protein xenB 3421232 - 3420162 - | xenobiotic reductase ACIAD3497 3421559 - 3421254 - | ArsR family transcriptional regulator TERM 4022 3421614 - 3421651 + r 95 -8.8 -4.89852 | overlap 3421599 TAATATCGTTTTTTT TCGATATTAATATTCT CTTTTT ACAATATTAATATCGA TTTTTATAGATATAG prfB 3422718 - 3421705 - | peptide chain release factor 2 TERM 4023 3422721 - 3422755 + H 70 -8.1 -3.2128 | gap 1, overlap 3422716 3422711 GCTCTTTTTTCAGAT CGTAGTCAAAGA-TAC CCCC GTAGTGTTTGACTACG TTCGGTTAAATCTTT ACIAD3499 3423251 - 3424024 + | porin TERM 4024 3424037 - 3424078 + T 100 -17.7 -2.65815 | opp_overlap 3424050, overlap 3424050 TAAGCACTGCTTAAG AACATAAAAAAAATCGCTC AAAT GAGCGATTTTTTTTATGTC TGATCTAAATGTAAG TERM 4025 3424065 - 3424050 - T 100 -9 -6.12328 | opp_overlap 3424037 3424050 AGAACATAAAAAAAA TCGCTC AAAT GAGCGA TTTTTTTTATGTCTG TERM 4026 3424050 - 3424065 + T 100 -9 -6.06529 | opp_overlap 3424050, overlap 3424037 AGAACATAAAAAAAA TCGCTC AAAT GAGCGA TTTTTTTTATGTCTG recJ 3425778 - 3424072 - | ssDNA exonuclease, 5'--> 3' specific, Mg dependent pdxH 3426435 - 3425779 - | pyridoxamine 5'-phosphate oxidase (acts also on pyridoxine phosphate and pyridoxine) glmM 3427782 - 3426451 - | phosphoglucosamine mutase TERM 4027 3426493 - 3426507 + g 70 -2.8 -4.93365 | TGCCAAACGATGAGC CAAGTC AGT GACTTC TTTTTGATTGTCACC TERM 4028 3427872 - 3427851 - R 100 -15.9 -5.52079 | opp_overlap 3427851 ACACCAAAACAAAAA CGCCGTCAG TGGA CTGACGGCG TTTTTTATTCAGGCT TERM 4029 3427851 - 3427872 + r 100 -15.9 -5.45652 | opp_overlap 3427851 ACACCAAAACAAAAA CGCCGTCAG TGGA CTGACGGCG TTTTTTATTCAGGCT guaB 3429369 - 3427903 - | IMP dehydrogenase ACIAD3504 3430513 - 3429497 - | hypothetical protein TERM 4030 3430709 - 3430677 - R 100 -12.2 -5.05037 | opp_overlap 3430685, overlap 3430685 CAACACAAAAATAAA TTAAAAAACGCCCT TCTAG AGGGCGTTTTTTTA TGATCAACTGAGTTA TERM 4031 3430685 - 3430701 + r 100 -10.1 -5.67063 | opp_overlap 3430677 3430685 AAATAAATTAAAAAA CGCCCTT CTA GAGGGCG TTTTTTTATGATCAA TERM 4032 3430701 - 3430685 - R 100 -9.4 -5.48163 | opp_overlap 3430685, overlap 3430677 AAATAAATTAAAAAA CGCCCT TCTAG AGGGCG TTTTTTTATGATCAA ACIAD3505 3431297 - 3430722 - | hypothetical protein TERM 4033 3431598 - 3431583 - R 90 -8.2 -5.16237 | opp_overlap 3431583 AACTGCATTAAAAAA CCCCGC CAGA GCGAGG TTTTTAGAGAAATAA TERM 4034 3431583 - 3431598 + r 74 -6 -4.57569 | opp_overlap 3431583 AACTGCATTAAAAAA CCCCGC CAGA GCGAGG TTTTTAGAGAAATAA aceF 3433621 - 3431636 - | dihydrolipoamide S-acetyltransferase, E2 component of the pyruvate dehydrogenase complex TERM 4035 3432636 - 3432658 + g 93 -9.8 -4.26076 | overlap 3432624 TCAGCTTTCTGTGCC GCTGGCGCAG GAG CTGCTTCAGC TTTTGCTACAGGTGC TERM 4036 3433307 - 3433335 + g 76 -8.1 -4.15328 | overlap 3433309 3433330 AGTCGCTGGTTTGGT TTCCTGTGGAGCA ACT TGCTCAACAGGTG TTTCTGCTTTAACTT TERM 4037 3433309 - 3433333 + g 100 -12.9 -3.66216 | overlap 3433307 3433330 TCGCTGGTTTGGTTT CCTGTGGAGCA ACT TGCTCAACAGG TGTTTCTGCTTTAAC aceE 3436339 - 3433625 - | pyruvate dehydrogenase subunit E1 TERM 4038 3436511 - 3436481 - R 93 -9.2 -4.27465 | opp_overlap 3436488, overlap 3436488 TATAACCTAAAATAA CAAAAAATCGCC AATTAAA GGCGATTTTTTA TACACAACTATTTGA TERM 4039 3436504 - 3436488 - R 91 -5.1 -5.77677 | opp_overlap 3436488, overlap 3436481 TAAAATAACAAAAAA TCGCC AATTAAA GGCGA TTTTTTATACACAAC TERM 4040 3436488 - 3436504 + r 80 -5.1 -5.24129 | opp_overlap 3436481 3436488 TAAAATAACAAAAAA TCGCC AATTAAA GGCGA TTTTTTATACACAAC ACIAD3508 3437333 - 3436608 - | putative signal peptide ACIAD3509 3437432 - 3437854 + | hypothetical protein lpxC 3438853 - 3437951 - | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase TERM 4041 3438940 - 3438922 - R 100 -11.8 -6.07374 | opp_overlap 3438922 ATAAAAAATAAAAAA GGTAGTGA ATC TCACTACC TTTTGGCTATCTTTA TERM 4042 3438922 - 3438940 + r 100 -11.8 -4.29981 | opp_overlap 3438922 ATAAAAAATAAAAAA GGTAGTGA ATC TCACTACC TTTTGGCTATCTTTA ftsZ 3440133 - 3438964 - | cell division protein FtsZ TERM 4043 3439111 - 3439097 - G 71 -10 -2.64616 | TCTTCATCTACAGCA TGTGCC GTT GGCACA TGAACATGATGTGGA ftsA 3441560 - 3440298 - | cell division protein ftsQ 3442479 - 3441625 - | cell division protein (in growth of wall at septum) TERM 4044 3441701 - 3441711 + g 73 -8.2 -3.68378 | overlap 3441699 CCATTTAATATTTTG GGCG GTA CGCC TGTTTTCCACTGTAG ddlB 3443411 - 3442482 - | D-alanine-D-alanine ligase B TERM 4045 3442539 - 3442517 - G 74 -7.8 -4.07568 | GCGTTTGCGCTAAAA TTTCGACGCA CAA TGCATCAAAA TCGATACCTATGGCT murC 3444910 - 3443462 - | UDP-N-acetylmuramate--alanine ligase TERM 4046 3443660 - 3443672 + g 71 -9.1 -3.32844 | TGTACGACTGTCTGC GCCCA CAA TGGGC TTCTCACCTGCAGGG murG 3446021 - 3444924 - | UDP-N-acetylglucosamine:N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase TERM 4047 3445098 - 3445113 + g 75 -9 -3.64599 | GGCTGCACCGACATC TGCCAG AAAT CTGGCA TTTGCAGTCTGATGA TERM 4048 3446203 - 3446255 + r 100 -14.4 -4.03167 | gap 1, opp_overlap 3446196 3446207 3446208, overlap 3446208 CAAAAACTCATTTTT TAAATGCCCCCATATTGTGACAAAC TCGA GTCAGTCACAATATGGGGGC-TGTA TTATTGTTAGTGTTG TERM 4049 3446252 - 3446207 - R 100 -19.9 -3.5594 | opp_overlap 3446203 3446208, overlap 3446196 3446208 AACTCATTTTTTAAA TGCCCCCATATTGTGACAAAC TCGA GTCAGTCACAATATGGGGGCT GTATTATTGTTAGTG TERM 4050 3446208 - 3446251 + r 100 -21.2 -3.35857 | opp_overlap 3446208 3446207, overlap 3446203 ACTCATTTTTTAAAT GCCCCCATATTGTGACAAAC TCGA GTCAGTCACAATATGGGGGC TGTATTATTGTTAGT TERM 4051 3446251 - 3446208 - R 100 -23.4 -2.73243 | opp_overlap 3446203 3446208, overlap 3446207 ACTCATTTTTTAAAT GCCCCCATATTGTGACAAAC TCGA GTCAGTCACAATATGGGGGC TGTATTATTGTTAGT gshB 3447206 - 3446262 - | glutathione synthetase TERM 4052 3446842 - 3446864 + g 70 -5.6 -4.2704 | overlap 3446843 3446845 GCAAAGAGTTTTTCG TTACAGTCAC GTA GTGATTGTGG TTTATTAATAATCCA TERM 4053 3447502 - 3447518 + H 74 -6.5 -4.36914 | opp_overlap 3447505 GAGATTCAATTTTAA GCAGATG ATG CATCAGC TTTTCTGCGCCCAAA TERM 4054 3447867 - 3447889 + G 82 -8.5 -4.41047 | gap 1 AAGTATGTTGGCTTT GGCA-CTTGC ATCG GCAAGCTGCC TTTTGATTACAGGAT ACIAD3520 3447844 - 3449541 + | hypothetical protein TERM 4055 3449593 - 3449551 - f 73 -9.3 -2.78349 | opp_overlap 3449551 3449558, overlap 3449550 AAATAATCGGTAAAG CCTTCAAGTCGCTTTTAGA ATATG TCTAAAAGCGACTCTATGA TTATAAATCAGCGCG TERM 4056 3449558 - 3449586 + F 95 -14.8 -3.03741 | opp_overlap 3449551 3449550, overlap 3449551 CGGTAAAGCCTTCAA GTCGCTTTTAGA ATATG TCTAAAAGCGAC TCTATGATTATAAAT ACIAD3521 3449757 - 3450023 + | hypothetical protein ACIAD3522 3450576 - 3450070 - | putative flavoprotein oxidoreductase TERM 4057 3450130 - 3450144 + g 71 -10 -2.59803 | opp_overlap 3450128 3450130, overlap 3450129 3450122 3450132 GCCCCGATTAAAATA CACCAG ACT CTGGTG ATGTTGATTCTGTTG TERM 4058 3450144 - 3450130 - G 80 -10 -3.73042 | opp_overlap 3450130 3450129 3450122 3450132, overlap 3450128 GCCCCGATTAAAATA CACCAG ACT CTGGTG ATGTTGATTCTGTTG metE 3451796 - 3450762 - | 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase ACIAD3524 3452881 - 3451814 - | hypothetical protein TERM 4059 3453053 - 3453038 - RH 93 -9 -4.66609 | opp_overlap 3453038 CACCTTAGTGAAAAA GGAAGC TTGT GCTTCC TTTTTCACTTGAAAT TERM 4060 3453038 - 3453053 + rH 93 -9 -4.74504 | opp_overlap 3453038 CACCTTAGTGAAAAA GGAAGC TTGT GCTTCC TTTTTCACTTGAAAT pyrE 3453781 - 3453068 - | orotate phosphoribosyltransferase TERM 4061 3454440 - 3454425 - gH 71 -7.5 -3.53811 | CTCATGGTGGTCAAA CCGCG GACAAG CGCGG GCCAAAAATGTAGGG crc 3453721 - 3454578 + | catabolite repression control protein TERM 4062 3454747 - 3454734 - fH 71 -5.3 -4.47183 | opp_overlap 3454734 TAGGATGGAAATAAA TAACC GGAT GGTTA TTTCAAGGATGTGAC TERM 4063 3454782 - 3454810 + FH 70 -4 -4.98672 | gap 2, opp_overlap 3454806, overlap 3454801 GACGTTGAAATGAGA CCCGCA--TGATCA GGA TGATTAAATGCGGG TTTTCTCTTTTTAAA ACIAD3528 3455050 - 3455400 + | putative arsenate reductase and related TERM 4064 3455416 - 3455434 + T 73 -8.9 -3.24976 | opp_overlap 3455416, overlap 3455414 3455412 CTCTTATATAAAAAA GCCGAAT ATAAC ATTCGGC TCTCTTTAAACCATT TERM 4065 3455434 - 3455416 - T 100 -9.6 -5.36441 | opp_overlap 3455416 3455414 3455412 CTCTTATATAAAAAA GCCGAATA TAA CATTCGGC TCTCTTTAAACCATT ACIAD3529 3455892 - 3455455 - | hypothetical protein est 3456055 - 3456960 + | esterase precursor TERM 4066 3456983 - 3456967 - f 91 -12.3 -3.30701 | opp_overlap 3456962, overlap 3456962 CGTGATTAAATGCAA GCTGGCA TTT TGCCAGC GACATTTAAAAAAAA ACIAD3531 3457081 - 3458262 + | hypothetical protein dsbD 3460096 - 3458276 - | thiol:disulfide interchange protein precursor TERM 4067 3459015 - 3459005 - G 79 -8.2 -4.22309 | ACAAAATAACAATAA GGCG CCA CGCC ACTGATCCTGAGTCT ACIAD3533 3460899 - 3460117 - | putative signal peptide ACIAD3534 3461457 - 3460900 - | hypothetical protein TERM 4068 3461408 - 3461421 + g 70 -3.8 -4.79826 | TCCAATGCCTCAATC GCCT GAACAA AGGC TTTTTGCTGATCTGT TERM 4069 3461629 - 3461598 - R 75 -9.6 -2.59748 | opp_overlap 3461596 3461599 3461608, overlap 3461608 TATTGTTATAAGCCA TATAAAAAAAGCCC TTTC GGGCTTTTTTTACT GCTTTCATTATTCTT TERM 4070 3461599 - 3461628 + r 83 -10.9 -3.07654 | opp_overlap 3461598 3461608, overlap 3461596 3461608 ATTGTTATAAGCCAT ATAAAAAAAGCCC TTTC GGGCTTTTTTTAC TGCTTTCATTATTCT TERM 4071 3461608 - 3461619 + r 93 -7.2 -5.5943 | opp_overlap 3461598 3461608, overlap 3461599 3461596 AGCCATATAAAAAAA GCCC TTTC GGGC TTTTTTTACTGCTTT TERM 4072 3461619 - 3461608 - R 93 -7.2 -5.72616 | opp_overlap 3461608 3461599 3461596, overlap 3461598 AGCCATATAAAAAAA GCCC TTTC GGGC TTTTTTTACTGCTTT ACIAD3535 3461990 - 3461637 - | hypothetical protein TERM 4073 3462383 - 3462373 - g 70 -5.4 -4.42851 | opp_overlap 3462373 CCAATAAAGCCAAAA TTGC AGT GCAA TTCGTCCTGAATTAT ACIAD3536 3462243 - 3463220 + | putative deacetylase TERM 4074 3463295 - 3463261 - f 74 -6 -4.56367 | opp_overlap 3463261 TACCTCATAAACAAA TAGATATCTTCA TTATTTGGCTT TGAAGATATCTA TTCCCTCTGGCATTG ACIAD3537 3463360 - 3463863 + | putative OHCU decarboxylase ACIAD3538 3463860 - 3464183 + | putative transthyretin-like protein precursor TERM 4075 3464219 - 3464250 + F 82 -5.2 -5.29782 | gap 1, opp_overlap 3464219, overlap 3464248 CCTGATAATGATGAA GCCGAGAT-CACAAT TTG GTCGTGCATTTCGGC TTTTTTATGCCTGTC ACIAD3539 3464261 - 3465097 + | hypothetical protein TERM 4076 3465130 - 3465109 - T 75 -8.8 -3.45776 | opp_overlap 3465109, overlap 3465100 3465113 CTAAACTGATCAGAA TCAAGGTC TGGATT GACCTTGA TTTTTTTAATCAACT TERM 4077 3465109 - 3465130 + T 95 -8.8 -5.52986 | opp_overlap 3465100 3465109 3465113 CTAAACTGATCAGAA TCAAGGTC TGGATT GACCTTGA TTTTTTTAATCAACT ACIAD3540 3466304 - 3465147 - | putative flavoprotein monooxygenase acting on aromatic compound TERM 4078 3467195 - 3467213 + G 71 -6.6 -4.183 | opp_overlap 3467186 3467185 CCAAACGTCGCCGTG CGCCAGGC TTC GACTGGTG TTTATTGGCACTTGG alc 3466513 - 3467517 + | allantoicase allA 3467533 - 3468042 + | ureidoglycolate hydrolase TERM 4079 3468058 - 3468082 + F 87 -6.3 -5.46706 | opp_overlap 3468058, overlap 3468062 TTTAAGAAGTAATTA GATTGGCTCCT ACA AGGGGCCTTTC TTTTTCTTTTCAAAT TERM 4080 3468062 - 3468078 + F 100 -10.1 -5.18409 | opp_overlap 3468058, overlap 3468058 AGAAGTAATTAGATT GGCTCCT ACA AGGGGCC TTTCTTTTTCTTTTC ACIAD3543 3468148 - 3468921 + | hypothetical protein parE 3470823 - 3468943 - | DNA topoisomerase IV subunit B ACIAD3545 3471432 - 3470839 - | putative esterase ACIAD3547 3471622 - 3472986 + | hypothetical protein TERM 4081 3473018 - 3472999 - T 76 -6.6 -4.62313 | opp_overlap 3472996, overlap 3472990 3472989 3472996 3473013 3473014 TAAAACGAAAAATAA TTTTCATT GAAT AATGAAAA TCGAATTTTCTCAAA TERM 4082 3473069 - 3473043 - T 100 -13.9 -5.72207 | opp_overlap 3473043, overlap 3473021 CTCAAACTAAAAAAA TCCCGAATGAT TGAGC ATCATTCGGGA TTTTTTTATTGATCA TERM 4083 3473043 - 3473069 + T 100 -13.9 -5.84381 | opp_overlap 3473021 3473043 CTCAAACTAAAAAAA TCCCGAATGAT TGAGC ATCATTCGGGA TTTTTTTATTGATCA dsbB 3473605 - 3473090 - | disulfide bond formation protein (disulfide oxidoreductase) gshA 3475214 - 3473622 - | gamma-glutamate-cysteine ligase ACIAD3550 3475407 - 3475946 + | hypothetical protein TERM 4084 3476283 - 3476265 - g 74 -8.1 -3.98484 | opp_overlap 3476263 3476265 AATTTAAGTCAGAAA CCACCAC GTCAG GCGGTGG TCTATTCATCACCAA ACIAD3551 3475968 - 3476570 + | hypothetical protein ACIAD3552 3476588 - 3477895 + | hypothetical protein TERM 4085 3478583 - 3478598 + G 74 -6.8 -4.35604 | overlap 3478595 GCTGCATTTTTCTAC GTTGCG CGAA CGCAGC TTTGTTGTCGGTTCA ACIAD3553 3477927 - 3479081 + | putative aminotransferase TERM 4086 3479342 - 3479353 + G 90 -5.8 -5.43866 | overlap 3479331 3479330 3479341 GGGTGGATGCGATTG CAGC CGTT GCTG TTTTTTTCCCGATTC ACIAD3554 3479143 - 3480555 + | hypothetical protein TERM 4087 3480585 - 3480567 - T 93 -7.4 -5.42265 | CTAAATGATAAAAAA GACCTATC ATT GATGGGTC TAGATCGTTTTAGGT ACIAD3555 3481448 - 3480612 - | putative short-chain dehydrogenase TERM 4088 3481535 - 3481516 - H 70 -8 -3.20437 | opp_overlap 3481516, overlap 3481515 ATCAATAATATAAAT TTGACAAT ATTC ATTGTCAA TATAGTGTATATCCG ACIAD3556 3481642 - 3482331 + | TetR family transcriptional regulator TERM 4089 3482390 - 3482424 + F 75 -8 -3.81548 | overlap 3482391 ACAAAATGGTCATTG ATTTCGCAATTATTTG TCA CAATTGATTGCGAAAA TTGTCTTATATCCTT TERM 4090 3482391 - 3482423 + F 83 -11.5 -2.87844 | overlap 3482390 CAAAATGGTCATTGA TTTCGCAATTATTTG TCA CAATTGATTGCGAAA ATTGTCTTATATCCT phoB 3482534 - 3483244 + | positive response regulator for the pho regulon,autophosphorylates and phosphorylates sensor PhoR phoR 3483248 - 3484612 + | two-component sensor TERM 4091 3485248 - 3485225 - g 100 -9.6 -5.20216 | CAGATGACCAAAAAA CACTAGCCGT AATC ACGACCAGTG ATATCCCAGCGTCAA ACIAD3559 3484792 - 3485295 + | hypothetical protein TERM 4092 3485318 - 3485362 + T 83 -11.7 -2.76737 | opp_overlap 3485321 3485330, overlap 3485330 TCATCTATTTGAAGC CAATATAAAAAATGCCCGA ACACTTA TCGGGCATTTTTTATTTAG ATTTACGGGTTCGTA TERM 4093 3485359 - 3485321 - T 89 -12 -3.18274 | opp_overlap 3485318 3485330, overlap 3485330 TCTATTTGAAGCCAA TATAAAAAATGCCCGA ACACTTA TCGGGCATTTTTTATT TAGATTTACGGGTTC TERM 4094 3485330 - 3485350 + T 93 -8.3 -5.67283 | opp_overlap 3485321 3485330, overlap 3485318 AGCCAATATAAAAAA TGCCCGA ACACTTA TCGGGCA TTTTTTATTTAGATT TERM 4095 3485350 - 3485330 - T 93 -8.3 -5.48063 | opp_overlap 3485330 3485318, overlap 3485321 AGCCAATATAAAAAA TGCCCGA ACACTTA TCGGGCA TTTTTTATTTAGATT psd 3486222 - 3485365 - | phosphatidylserine decarboxylase rhdA 3487076 - 3486219 - | thiosulfate sulfurtransferase pncB 3488394 - 3487171 - | nicotinate phosphoribosyltransferase dtd 3488548 - 3488988 + | D-tyrosyl-tRNA deacylase TERM 4096 3488983 - 3489017 + T 83 -11.6 -2.6563 | opp_overlap 3488983 3488986 3488993, overlap 3488993 TTTCAGCTCGAAATA TTATAAAAAACGCCCT TAA AGGGCGTTTTTTAACA TCGATTCTTAGAACG TERM 4097 3489017 - 3488983 - T 89 -11.6 -3.36515 | opp_overlap 3488983 3488993, overlap 3488986 3488993 TTTCAGCTCGAAATA TTATAAAAAACGCCCT TAA AGGGCGTTTTTTAACA TCGATTCTTAGAACG TERM 4098 3489014 - 3488986 - T 100 -17.7 -2.84801 | opp_overlap 3488983 3488993, overlap 3488983 3488993 CAGCTCGAAATATTA TAAAAAACGCCCT TAA AGGGCGTTTTTTA ACATCGATTCTTAGA TERM 4099 3489007 - 3488993 - T 100 -11.4 -5.38321 | opp_overlap 3488993 3488983, overlap 3488986 3488983 AAATATTATAAAAAA CGCCCT TAA AGGGCG TTTTTTAACATCGAT TERM 4100 3488993 - 3489007 + T 100 -11.4 -5.05782 | opp_overlap 3488986 3488983 3488993, overlap 3488983 AAATATTATAAAAAA CGCCCT TAA AGGGCG TTTTTTAACATCGAT ACIAD3564 3489510 - 3489025 - | hypothetical protein TERM 4101 3489640 - 3489622 - RH 100 -7.4 -5.94743 | opp_overlap 3489622 TAAAAAAAATAAAAA GGCATAGC AGC GCTACACC TTTTTCATTGATCTT ACIAD3565 3490042 - 3489665 - | hypothetical protein ACIAD3566 3490028 - 3490351 + | hypothetical protein TERM 4102 3490403 - 3490370 - TR 73 -8.3 -3.695 | opp_overlap 3490378, overlap 3490378 3490388 TTTTAAAATTAAACA TAAAAAAACGCCATA AGAT CATGGCGTTTTTACA TCATGAGAGATTATA TERM 4103 3490395 - 3490378 - TR 100 -7.7 -5.88197 | opp_overlap 3490378, overlap 3490370 3490388 TTAAACATAAAAAAA CGCCATA AGAT CATGGCG TTTTTACATCATGAG TERM 4104 3490378 - 3490395 + Tr 83 -7 -4.68593 | opp_overlap 3490378 3490370 3490388 TTAAACATAAAAAAA CGCCAT AAGATC ATGGCG TTTTTACATCATGAG serB 3491639 - 3490419 - | phosphoserine phosphatase TERM 4105 3492930 - 3492914 - g 70 -8 -3.58329 | opp_overlap 3492910 3492922, overlap 3492910 GGAATGAATAACGAA TGTGCC GAGCT GGCACA GCGTTTACGTACCGA ACIAD3568 3491717 - 3493012 + | hypothetical protein TERM 4106 3493053 - 3493028 - f 100 -16.3 -3.74077 | opp_overlap 3493028, overlap 3493032 GTTTACACACTCAAA CAAACACCCGA TCTG TCGGGTGTTTG TTTTTTTAAATGGAC TERM 4107 3493028 - 3493053 + F 100 -16.3 -5.47218 | opp_overlap 3493028 3493032 GTTTACACACTCAAA CAAACACCCGA TCTG TCGGGTGTTTG TTTTTTTAAATGGAC TERM 4108 3493049 - 3493032 - f 100 -11.3 -4.48902 | opp_overlap 3493028, overlap 3493028 ACACACTCAAACAAA CACCCGA TCTG TCGGGTG TTTGTTTTTTTAAAT TERM 4109 3494125 - 3494106 - g 95 -7.8 -5.09426 | CTCAAGCTGAAAAAA CAGGATGG CGAG CCAGCCTG GAATCTGGATCGCGC ribB/A 3493308 - 3494429 + | bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II ribH 3494441 - 3494911 + | 6,7-dimethyl-8-ribityllumazine synthase (Lumazine synthase)(riboflavin synthase beta chain) nusB 3494915 - 3495364 + | transcription termination, L factor (N utilization substance protein B) TERM 4110 3495373 - 3495350 - f 83 -7.5 -4.66833 | CGCGAAGCTGAAAAA CAACAAGCC AACTAA GACTTGTTG CACATATGGCTGAGT thiL 3495379 - 3496296 + | thiamin-monophosphate kinase pgpA 3496289 - 3496789 + | phosphatidylglycerophosphatase A TERM 4111 3496862 - 3496845 - g 89 -11.3 -3.53012 | opp_overlap 3496843 CTTGCTGCTGGTAAA GGAACGC GCAT GCGTTCC CATCTTCCTAAAGTT glmU 3496809 - 3498173 + | bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase glmS 3498186 - 3500024 + | glucosamine--fructose-6-phosphate aminotransferase TERM 4112 3500035 - 3500046 + F 71 -3 -5.09173 | opp_overlap 3500034 AATAACTTAAGATAT TGAT ATAT ATCA TTTTTTAAAATATTA TERM 4113 3500100 - 3500080 - f 100 -14.1 -5.38249 | opp_overlap 3500080 ATCAACTATAAAAAA CCCTGTTTC AAT GAAACAGGG TTTTTTATCTATAAA TERM 4114 3500080 - 3500100 + F 100 -14.1 -5.4251 | opp_overlap 3500080 ATCAACTATAAAAAA CCCTGTTTC AAT GAAACAGGG TTTTTTATCTATAAA TERM 4115 3500215 - 3500191 - f 71 -6.7 -4.1711 | ATTATTCGCAATAAA TTTTCATAATT CGT AATTATAAAAA ATCCGTATGATGAAG ACIAD3577 3500268 - 3500654 + | putative fumarylacetoacetate hydrolase (pseudogene part 1) ACIAD3578 3500599 - 3501027 + | putative fumarylacetoacetate hydrolase (pseudogene part 2) TERM 4116 3501256 - 3501237 - g 74 -6.4 -4.57353 | opp_overlap 3501236 GCTCACCAGAGAAAA TTGCTCCG ATTA CCGAGCAA ATTAAATATGAGATG ACIAD3579 3501035 - 3501343 + | hypothetical protein ACIAD3581 3501453 - 3501740 + | hypothetical protein TERM 4117 3501856 - 3501870 + G 70 -10 -2.54896 | overlap 3501852 AGCCAAGCCCATTTG CCCAGA ATG TCTGGG TGGGTTGCCTACGCC ACIAD3582 3501743 - 3502228 + | hypothetical protein ACIAD3583 3503202 - 3502201 - | putative transporter; putative sodium/bile acid transporter family protein pncA 3503868 - 3503224 - | bifunctional pyrazinamidase/nicotinamidase dapA 3504203 - 3505165 + | dihydrodipicolinate synthase ACIAD3586 3505175 - 3505780 + | putative lipoprotein-34 precursor (NlpB) TERM 4118 3505873 - 3505857 - g 73 -5.9 -4.55128 | overlap 3505827 3505858 ACTGGTAAAGCAAAA TCTGTCT ATG AAACAGA CAGCGCAGACCATTT TERM 4119 3506466 - 3506442 - g 78 -2.2 -5.5353 | gap 1 GACACCAAGAAAAAA CTCGAC-AAAG ATCG CTTCCGTCAAG GTTTGGGCGGCGTAG purC 3505818 - 3506537 + | phosphoribosylaminoimidazole-succinocarboxamide synthase TERM 4120 3506566 - 3506584 + F 95 -8.9 -5.64274 | opp_overlap 3506566 AAAGTGAGTAATCAA GGTAGTC TTAAT GACTACC TTTTTTTATAGCTCA TERM 4121 3506584 - 3506566 - f 75 -8.9 -3.41982 | opp_overlap 3506566 AAAGTGAGTAATCAA GGTAGTC TTAAT GACTACC TTTTTTTATAGCTCA TERM 4122 3506822 - 3506874 + F 86 -5.5 -5.63504 | overlap 3506828 3506831 AACATTGTATTTGGC TGCTATTTTGGTGATCTGGTAAGAC CAG GTCTGACCAGATCACCTTATTTACG TTTTTTTATAACCTT TERM 4123 3506828 - 3506868 + F 100 -14.1 -4.12151 | overlap 3506822 3506831 GTATTTGGCTGCTAT TTTGGTGATCTGGTAAGAC CAG GTCTGACCAGATCACCTTA TTTACGTTTTTTTAT TERM 4124 3506831 - 3506865 + F 100 -20.2 -4.12072 | overlap 3506828 3506822 TTTGGCTGCTATTTT GGTGATCTGGTAAGAC CAG GTCTGACCAGATCACC TTATTTACGTTTTTT ACIAD3588 3506930 - 3507847 + | amino acid ABC transporter periplasmic substrate-binding protein ACIAD3589 3507882 - 3508550 + | amino acid ABC transporter membrane protein ACIAD3591 3508550 - 3509215 + | amino acid ABC transporter membrane protein ACIAD3592 3509193 - 3509924 + | amino acid ABC transporter ATP-binding protein TERM 4125 3509957 - 3509975 + F 71 -5.2 -4.48823 | opp_overlap 3509957 AACCTTTTTATGTAA CCATCACG CTA TGTGCTGG TTTTGTCCGTTGATT TERM 4126 3510776 - 3510796 + G 95 -2.5 -6.11243 | overlap 3510777 GGATGTTGCCTTCTG CCAGCAATA AAT TTTTGCTGA TTTTTTTTATTACCT ACIAD3593 3510154 - 3511008 + | hypothetical protein TERM 4127 3511054 - 3511034 - T 73 -8.2 -3.60792 | overlap 3511045 CTGTCAATGGGTAAA GGGCGACC AAACA GGTAGCCC TGAAAGGTAAAACAC ACIAD3594 3513042 - 3511012 - | putative diguanylate cyclase/phosphodiesterase TERM 4128 3512068 - 3512082 + g 70 -2.8 -5.01732 | overlap 3512063 ACGAGCGATAGTTTC TGTTTC ACG GACACA TTTTTTGACACGATT TERM 4129 3512555 - 3512574 + g 73 -3.6 -5.00138 | opp_overlap 3512542 3512551, overlap 3512557 AATTCATAATATTCA TATTGTGA AATA TCACAAAA TTTTTCATTTACATG TERM 4130 3513117 - 3513127 + r 84 -4 -5.76633 | TTTATAACGCACTTA TTCA ATA TGAA TTTTTTTATATCTAA TERM 4131 3513598 - 3513576 - R 100 -10.6 -4.44284 | opp_overlap 3513578, overlap 3513578 AACGGAATACGAAAA TAGCCCAACA GGA TGTTGGGCTT TTTTTCTATTTTCAT TERM 4132 3513596 - 3513578 - R 95 -13.2 -3.81853 | opp_overlap 3513578, overlap 3513576 CGGAATACGAAAATA GCCCAACA GGA TGTTGGGC TTTTTTTCTATTTTC TERM 4133 3513578 - 3513596 + r 100 -13.2 -5.9362 | opp_overlap 3513576 3513578 CGGAATACGAAAATA GCCCAACA GGA TGTTGGGC TTTTTTTCTATTTTC ACIAD3596 3514906 - 3513635 - | recombination factor protein RarA TERM 4134 3513883 - 3513864 - G 70 -7.9 -3.5764 | AACGGCACTGGCAAA TTGGCTG TTTTCT CAGCCAA CGCCAATGCGCGATC ampC 3516179 - 3514986 - | beta-lactamase ACIAD3598 3517369 - 3516197 - | putative glucose dehydrogenase precursor ACIAD3599 3518018 - 3517500 - | putative transcriptional regulator; putative detoxification transcriptional regulator ACIAD3600 3517967 - 3518611 + | hypothetical protein ACIAD3601 3519090 - 3518608 - | hypothetical protein TERM 4135 3518740 - 3518761 + g 70 -8.1 -3.60502 | ATTCAGATAATGCCA TGAAGGTAA ATTC TTGCCTTCA TTTAAACGTCTATAT ACIAD3602 3519248 - 3519406 + | hypothetical protein TERM 4136 3519483 - 3519430 - f 84 -12.1 -2.6252 | opp_overlap 3519447, overlap 3519447 TTATACCACAAGGTA TACGGTACATAAAAAAAGAAGGATC AATT GATCCTTCTTTTTTTATGTAAAAGA AATCAGAGCGCACAC TERM 4137 3519466 - 3519447 - f 100 -10.8 -5.71712 | opp_overlap 3519447, overlap 3519430 CGGTACATAAAAAAA GAAGGATC AATT GATCCTTC TTTTTTTATGTAAAA TERM 4138 3519447 - 3519466 + F 100 -10.8 -5.71712 | opp_overlap 3519447 3519430 CGGTACATAAAAAAA GAAGGATC AATT GATCCTTC TTTTTTTATGTAAAA ACIAD3603 3519576 - 3520340 + | putative dienelactone hydrolase ACIAD3604 3520394 - 3520762 + | putative histidine triad family protein TERM 4139 3520809 - 3520786 - f 90 -11 -3.78022 | opp_overlap 3520786 CCCAGATTTAGCAAA GGGGATGACC ATAT GGTGATCCCC TTTTGCATCGCTATT TERM 4140 3520786 - 3520809 + F 100 -11 -4.20932 | opp_overlap 3520786 CCCAGATTTAGCAAA GGGGATGACC ATAT GGTGATCCCC TTTTGCATCGCTATT TERM 4141 3521274 - 3521292 + G 74 -9.6 -3.38272 | CTGATGTCACTCGGT TTACGCCA ATA TGGCGTGA TTATGGATGGTAATG mutY 3520893 - 3521927 + | A/G specific adenine glycosylase ACIAD3607 3521939 - 3522499 + | putative peptidase ACIAD3608 3522511 - 3522756 + | hypothetical protein ACIAD3609 3523091 - 3522753 - | hypothetical protein tag 3523373 - 3523930 + | 3-methyl-adenine DNA glycosylase I, constitutive TERM 4142 3524247 - 3524276 + G 74 -10.1 -3.21276 | gap 1, overlap 3524245 CAGAAAGCTGTCAGG CCTG-TGACCAATG CAT CAGTGGTCAGCAGG TATTGTGCACGGGCG TERM 4143 3524592 - 3524571 - g 73 -3.7 -4.96468 | gap 1 CAAATCCAAACAAAA CCGATGAGCT CAA AGC-CATGGG GGCCGATCACGTGGT ACIAD3612 3523955 - 3524977 + | putative alcohol dehydrogenase TERM 4144 3525017 - 3524992 - T 95 -14.9 -3.07935 | opp_overlap 3524992 3524993 ATTTTATGTAGTCAA TCTGGCAATCA GTTT TGATTGCCAGA TTTTAACAATGCTGT TERM 4145 3524992 - 3525017 + T 100 -14.9 -4.12456 | opp_overlap 3524992, overlap 3524993 ATTTTATGTAGTCAA TCTGGCAATCA GTTT TGATTGCCAGA TTTTAACAATGCTGT ACIAD3613 3526432 - 3525020 - | putative transcriptional regulator TERM 4146 3525220 - 3525245 + g 76 -11.2 -2.52676 | opp_overlap 3525227 3525231 TGTCTGGTAGTTCAA GCCATAAGGC ATAGCC GCCTTGTGGC TGACTTAAACCAATG TERM 4147 3525390 - 3525367 - G 74 -4.6 -4.77438 | opp_overlap 3525372, overlap 3525372 AGCCACGACTAAAAA TAAAATCGGC CAGC GCCAATTGTA GTGGGGTATTAACGG TERM 4148 3525385 - 3525372 - G 82 -4.5 -5.3104 | opp_overlap 3525372, overlap 3525367 CGACTAAAAATAAAA TCGGC CAGC GCCAA TTGTAGTGGGGTATT TERM 4149 3526650 - 3526638 - g 77 -6.3 -4.67011 | opp_overlap 3526638 AAGGCTATTTAAAAA TACAG CAA CTGTA TAATTATCAATTTTG ACIAD3614 3526523 - 3526861 + | hypothetical protein ACIAD3615 3527764 - 3526856 - | putative transcriptional regulator; putative transcriptional activator TERM 4150 3526931 - 3526916 - G 74 -6.2 -4.54301 | TAAAAAATCAATAAA TAAACG TACA CGTTTA GGTAAATGCTTTTGT TERM 4151 3527225 - 3527239 + g 78 -2.1 -5.48825 | gap 1 CAGTTCTTGTGGATG GCTCGG TGTT CC-AGC TTTTTTTAGATAGTC dkgB 3527908 - 3528714 + | 2,5-diketo-D-gluconate reductase B TERM 4152 3529355 - 3529373 + G 76 -11 -2.63853 | overlap 3529354 3529352 3529359 GGCACTCATGACTAC GGTACTGG GTG CCAGTGCC ATGTTTACCCTGTAT ACIAD3617 3528726 - 3529901 + | MFS family transporter TERM 4153 3529926 - 3529903 - T 75 -9.6 -2.53012 | opp_overlap 3529908, overlap 3529908 AATGTTATCATTAAG CAAAAGCGCC TTCG GGCGCTTTTT TGCAGATATCACCAG TERM 4154 3529921 - 3529908 - T 93 -9.5 -4.46615 | opp_overlap 3529908, overlap 3529903 TATCATTAAGCAAAA GCGCC TTCG GGCGC TTTTTTGCAGATATC TERM 4155 3529908 - 3529921 + T 100 -9.5 -5.04385 | opp_overlap 3529908 3529903 TATCATTAAGCAAAA GCGCC TTCG GGCGC TTTTTTGCAGATATC ACIAD3618 3530600 - 3529944 - | putative signal peptide TERM 4156 3530765 - 3530777 + r 83 -7.7 -4.72007 | AACCTGTTTGGCATA TCAGC CAT GCTGA TTTATTTTGATACAG dapB 3531622 - 3530801 - | dihydrodipicolinate reductase TERM 4157 3531703 - 3531730 + r 75 -10 -2.66326 | opp_overlap 3531710, overlap 3531710 TAAAATAATCACCAT AAAAAAACCTGC CGCA GCAGGTTTTTTA TCAATTTAGACTTAA TERM 4158 3531723 - 3531710 - R 93 -8.1 -5.67967 | opp_overlap 3531703 3531710 ATCACCATAAAAAAA CCTGC CGCA GCAGG TTTTTTATCAATTTA TERM 4159 3531710 - 3531723 + r 90 -8.1 -5.33866 | opp_overlap 3531710, overlap 3531703 ATCACCATAAAAAAA CCTGC CGCA GCAGG TTTTTTATCAATTTA dnaJ 3532848 - 3531742 - | heat shock protein (Hsp40), co-chaperone with DnaK TERM 4160 3532763 - 3532779 + g 78 -4.3 -5.23316 | GGATGATATTTCATC GCCAACT TGC GGTAGGC TTTTTTGATCTCATC ACIAD3622 3533330 - 3532953 - | hypothetical protein ACIAD3624 3536591 - 3533463 - | Acr family drug resistance transporter ACIAD3625 3537697 - 3536588 - | putative RND efflux membrane fusion protein precursor TERM 4161 3537768 - 3537797 + H 79 -8.1 -3.94402 | opp_overlap 3537775 3537777, overlap 3537771 AGAGTGTTTGTTTTT TAATTAATATACC CATT GGTACATTAATTA TTGTTTAGAGCTTAT ACIAD3626 3537851 - 3538465 + | putative transcriptional regulator TERM 4162 3539162 - 3539146 - g 73 -8.7 -3.44229 | ACTTGATCAGCAGAA GCTCACG CCA CGTGAAC GTCAGCAAGTATTGG ppc 3538637 - 3541321 + | phosphoenolpyruvate carboxylase TERM 4163 3541370 - 3541338 - f 100 -14.3 -3.96148 | opp_overlap 3541335 3541346 GTCTTTTATGATAAA CCCGATGATCTTCAA GTG CTGAAGATTATCGGG CAACTTCTCATAACC TERM 4164 3541408 - 3541423 + F 71 -3.4 -5.20534 | opp_overlap 3541402 TAAAAATATTTTTTA TAAAAT TAAA ATTTTA TTTTTATTCATTGGT TERM 4165 3541682 - 3541696 + G 76 -7.8 -4.2349 | ATGAATATTTACCTG CTGCAC AAA GTGCGG TTTTAGGTATCCAGC TERM 4166 3542087 - 3542114 + G 73 -10 -2.92091 | opp_overlap 3542093, overlap 3542093 TGGCACCTGTCACGG TCAAAGGGGTTG CTGG CAATCCTTTTGA TATGTGGATGGCTCT TERM 4167 3542452 - 3542430 - g 79 -8.4 -4.10161 | opp_overlap 3542429 3542430 CATGACGGGTGAAAA CCTTACCCCA CAA TTGGGCAAGG CTTTTGTGGCTGACG ACIAD3628 3541600 - 3542895 + | uracil transport protein TERM 4168 3542913 - 3542933 + F 86 -8.3 -4.66833 | opp_overlap 3542913 CTGGATTGATCAAAA CAGCAGC TTTTATC GCTGCTG TTTTTACGCTTAAAA TERM 4169 3542933 - 3542913 - f 83 -8.3 -4.2828 | opp_overlap 3542913 CTGGATTGATCAAAA CAGCAGC TTTTATC GCTGCTG TTTTTACGCTTAAAA TERM 4170 3543781 - 3543765 - g 70 -5.1 -4.44797 | opp_overlap 3543773, overlap 3543773 GCAGCAAGACTAAAA GCAAGCT ATG ATCTTGC GATCATTCCGTTAAA ACIAD3629 3543012 - 3543917 + | putative transcriptional regulator ACIAD3630 3544675 - 3543914 - | hypothetical protein TERM 4171 3544814 - 3544791 - R 100 -9.6 -5.87996 | opp_overlap 3544791 CAATGAACAAAAAAA CCAGTACAGC GTTT GCCATACTGG TTGATCAATCAAATA ndh 3546183 - 3544852 - | NADH dehydrogenase II TERM 4172 3546343 - 3546383 + r 100 -10.8 -4.54727 | gap 1, opp_overlap 3546355, overlap 3546355 ACTCAGATAAATACT CACATAAAAAAAGATGGCA TTTT TGCCATCTTTTTTGAT-TG TTTTGCTTTAGAACA TERM 4173 3546355 - 3546372 + r 100 -9.9 -5.43514 | opp_overlap 3546355, overlap 3546343 ACTCACATAAAAAAA GATGGCA TTTT TGCCATC TTTTTTGATTGTTTT TERM 4174 3546372 - 3546355 - R 100 -9.9 -5.72616 | opp_overlap 3546355 3546343 ACTCACATAAAAAAA GATGGCA TTTT TGCCATC TTTTTTGATTGTTTT ACIAD3635 3547706 - 3546405 - | hypothetical protein TERM 4175 3547679 - 3547662 - G 72 -6.3 -4.37092 | overlap 3547676 AGGTTTTTGATAAAA CCAACTC GATC GAATTGG ATCAAACCAACGTCT TERM 4176 3547752 - 3547725 - R 100 -14.4 -3.61715 | opp_overlap 3547729, overlap 3547729 GAGCGCCTCGAATAA TAAACCCTTGTA ATCT TACAAGGGTTTA TAACAATTCAGGACA TERM 4177 3547729 - 3547748 + r 90 -10.8 -3.89614 | opp_overlap 3547725 3547729 GCCTCGAATAATAAA CCCTTGTA ATCT TACAAGGG TTTATAACAATTCAG TERM 4178 3547748 - 3547729 - R 100 -10.8 -4.44667 | opp_overlap 3547729, overlap 3547725 GCCTCGAATAATAAA CCCTTGTA ATCT TACAAGGG TTTATAACAATTCAG ACIAD3636 3549463 - 3547778 - | dihydroxy-acid dehydratase TERM 4179 3549949 - 3549961 + G 72 -6.3 -4.28254 | ACAATTTACCTGTTT TGCAA CCG TTGCA TTTTAAATCTTCAAC fmt 3549771 - 3550730 + | methionyl-tRNA formyltransferase TERM 4180 3550774 - 3550786 + G 71 -9.1 -3.37612 | CAACTTACGTGCTCA GGTCG TAG CGACC TTACTTAAAGTTCAA TERM 4181 3551227 - 3551195 - g 73 -10.5 -2.53903 | opp_overlap 3551194, overlap 3551194 3551192 3551215 CGTCTGAAAAAGGAC TGGCCAGCGCAGCTC AAT GAGCTGTGCCAGCAA CTTAAATATTCTGCA TERM 4182 3551521 - 3551508 - g 79 -6.7 -4.60487 | CACCAGGCGGAAAAA CAGCA CATT TGCTG GAAAAATTCACACCT sun 3550727 - 3552031 + | 16S rRNA m5C967 SAM-dependent methyltransferase TERM 4183 3552023 - 3552037 + T 93 -7.8 -5.71983 | opp_overlap 3552023 3552025, overlap 3552015 TGTCGTATCGAAAAA GTCGCA TAA TGCGGC TTTTTTTATGGTTAG TERM 4184 3552037 - 3552023 - T 74 -5.6 -4.65895 | opp_overlap 3552023 3552015, overlap 3552025 TGTCGTATCGAAAAA GTCGCA TAA TGCGGC TTTTTTTATGGTTAG zupT 3552885 - 3552064 - | zinc transporter ZupT TERM 4185 3552249 - 3552224 - G 70 -9.8 -2.55505 | overlap 3552223 3552219 AATCCAAAAATAATG CCATACATGG TCGCTC CCATGTACGG GGCTAAAATAAAATA TERM 4186 3552921 - 3552890 - R 73 -3.8 -5.07107 | opp_overlap 3552907, overlap 3552894 3552908 GAAATTCTCAAAAAA TAAAGCCACCATCA TAAA TGATAATGACTTTC ATTTTCAATAATATC TERM 4187 3552917 - 3552894 - R 76 -4.6 -5.04249 | opp_overlap 3552907, overlap 3552890 3552908 TTCTCAAAAAATAAA GCCACCATCA TAAA TGATAATGAC TTTCATTTTCAATAA ACIAD3640 3553102 - 3552959 - | hypothetical protein ACIAD3641 3554592 - 3553114 - | hypothetical protein TERM 4188 3553451 - 3553433 - G 73 -8.2 -3.73402 | opp_overlap 3553432 ATATTGTTGATGAAA TGATCGAT AAT ATCGACCA GCTTGATGGCATTAA TERM 4189 3553495 - 3553483 - G 70 -5.5 -4.45771 | overlap 3553486 ACTTGAAAATAGAAA GATCG ATA CGACC GCACTACCACCGCCA TERM 4190 3554923 - 3554964 + r 85 -10.3 -3.51637 | opp_overlap 3554926 3554931, overlap 3554926 TAACAATTAGAAAAA TAACAAAATGTACTGTTCC ACGT GGAACAGTACATCTCGATA TTATCATGTCTCTAT TERM 4191 3554961 - 3554926 - R 100 -16.4 -4.58563 | opp_overlap 3554926 3554923, overlap 3554931 CAATTAGAAAAATAA CAAAATGTACTGTTCC ACGT GGAACAGTACATCTCG ATATTATCATGTCTC TERM 4192 3554926 - 3554961 + r 84 -12 -2.58783 | opp_overlap 3554926 3554931, overlap 3554923 CAATTAGAAAAATAA CAAAATGTACTGTTCC ACGT GGAACAGTACATCTCG ATATTATCATGTCTC TERM 4193 3554956 - 3554931 - R 100 -14.9 -5.18715 | opp_overlap 3554926 3554923, overlap 3554926 AGAAAAATAACAAAA TGTACTGTTCC ACGT GGAACAGTACA TCTCGATATTATCAT ACIAD3642 3556466 - 3555015 - | putative aldehyde dehydrogenase TERM 4194 3556651 - 3556678 + GH 74 -4.9 -4.78753 | overlap 3556653 3556675 CATGTTGCATCACTT TTGGTTTGAGT AATATG GCTCAAGCCGA TTTTATTGGTATTAA ACIAD3643 3556614 - 3556742 + | hypothetical protein ACIAD3644 3556709 - 3557311 + | hypothetical protein ACIAD3645 3557370 - 3558473 + | hypothetical protein ACIAD3646 3558712 - 3559257 + | putative protease TERM 4195 3559322 - 3559353 + T 100 -15.4 -4.06964 | opp_overlap 3559332, overlap 3559324 3559332 ATCTTTATTTAACCG TAGTAAAAAAGGGC ATAA GCCCTTTTTTACTG TTTAGTTCTATGTGT TERM 4196 3559324 - 3559351 + T 100 -15.8 -3.617 | opp_overlap 3559332, overlap 3559322 3559332 CTTTATTTAACCGTA GTAAAAAAGGGC ATAA GCCCTTTTTTAC TGTTTAGTTCTATGT TERM 4197 3559332 - 3559343 + T 89 -7.2 -5.32699 | opp_overlap 3559332, overlap 3559324 3559322 AACCGTAGTAAAAAA GGGC ATAA GCCC TTTTTTACTGTTTAG TERM 4198 3559343 - 3559332 - T 88 -7.2 -5.16237 | opp_overlap 3559332 3559324 3559322 AACCGTAGTAAAAAA GGGC ATAA GCCC TTTTTTACTGTTTAG TERM 4199 3559423 - 3559447 + T 100 -14.2 -4.00532 | opp_overlap 3559423 TTCTGCATAAAAAAA GCCCCCTGGC GTTTG GCCTGGGGGC TTTAGTATTTAAAAG TERM 4200 3559447 - 3559423 - T 100 -14.2 -5.60993 | opp_overlap 3559423 TTCTGCATAAAAAAA GCCCCCTGGC GTTTG GCCTGGGGGC TTTAGTATTTAAAAG TERM 4201 3561380 - 3561394 + T 80 -7.1 -4.56607 | overlap 3561373 TGGTCTTTCGGCGAA CGGGT TTTTC ACCCG TTTTGTCGTTACTCA TERM 4202 3562172 - 3562184 + T 89 -9.1 -4.2354 | AGGATCTATTTCACT CCCCT CAC AGGGG TTCTTTTCGCCTTTC TERM 4203 3562922 - 3562907 - T 73 -7.6 -3.8766 | overlap 3562917 TCAGATCACACTAAA CTGTGA TAAA TCACAG AACTTAATAAAACAA TERM 4204 3562971 - 3562917 - T 85 -9.1 -3.91072 | gap 1, opp_overlap 3562922 3562935 3562938, overlap 3562907 3562935 3562938 CTAAACTGTGATAAA TCACAGAACTTAAT-AAAACAAGATC TCAT GATCTTCTTTTTACTAAGTTCTATAA TCTACACCTTAGCCG TERM 4205 3563148 - 3563164 + T 81 -10.9 -2.62396 | overlap 3563140 3563150 TTGAACTTGTGACCC CACGCTT ATC AAGCGTG TGCTCTAACCAACTG TERM 4206 3563267 - 3563286 + T 72 -9.2 -2.65808 | opp_overlap 3563258, overlap 3563264 TAAGGAGGTGATCCA GCCGCAGG TTCC CCTACGGC TACCTTGTTACGACT TERM 4207 3565134 - 3565148 + T 100 -10 -4.62069 | GTGTTCTATTTTTGC GCACCA ACA TGGTGC TTTTTAAGGTAAAAA ppiA 3565782 - 3565216 - | peptidyl-prolyl cis-trans isomerase precursor (PPIase) (rotamase) TERM 4208 3565861 - 3565890 + r 95 -12.5 -3.63782 | overlap 3565858 TGTTTTAATTGTGTA TTTGATACTATTT CTTC AAATAGTATCAAA TTTCAACTGATCTTA estA 3566979 - 3565909 - | carboxylesterase TERM 4209 3567227 - 3567261 + r 100 -18.2 -2.7314 | opp_overlap 3567227 3567231, overlap 3567231 GTGTTTCCAATAAAA TAAACCCCTAAATCAT AAG GTGATTTAGGGGTTTA TCCTCTGGTTTGCAA TERM 4210 3567261 - 3567227 - R 100 -17.5 -4.63218 | opp_overlap 3567227 3567231, overlap 3567231 GTGTTTCCAATAAAA TAAACCCCTAAATCA TAAGG TGATTTAGGGGTTTA TCCTCTGGTTTGCAA TERM 4211 3567231 - 3567257 + r 100 -14.6 -4.04752 | opp_overlap 3567227 3567231, overlap 3567227 TTCCAATAAAATAAA CCCCTAAATCAT AAG GTGATTTAGGGG TTTATCCTCTGGTTT TERM 4212 3567257 - 3567231 - R 100 -13.9 -4.87892 | opp_overlap 3567231 3567227, overlap 3567227 TTCCAATAAAATAAA CCCCTAAATCA TAAGG TGATTTAGGGG TTTATCCTCTGGTTT ACIAD3649 3567868 - 3567530 - | hypothetical protein TERM 4213 3567830 - 3567810 - G 100 -4.7 -6.02919 | overlap 3567811 TGACAAATAAAAAAA TCACAAAGT CCA ACTTTGCGC TGCCTATCATTCACA TERM 4214 3567829 - 3567811 - G 79 -8.2 -4.19311 | overlap 3567810 GACAAATAAAAAAAT CACAAAGT CCA ACTTTGCG CTGCCTATCATTCAC TERM 4215 3567960 - 3567948 - R 84 -6.3 -5.09259 | TAGCTTAAAATAAAA GAGAA ATG TTCTC ATTGAGCCTAATATT ACIAD3650 3569002 - 3568136 - | putative signal peptide ACIAD3651 3569075 - 3570001 + | putative transcriptional regulator TERM 4216 3570390 - 3570378 - g 76 -6.9 -4.47007 | GAAAAAGTAAAAGAA CGCGC AGA ACGCG AAGCAGATACTGCCA grpE 3570168 - 3570722 + | Hsp 24 nucleotide exchange factor TERM 4217 3571673 - 3571650 - g 73 -2.5 -5.18355 | CTGAAAAAGCAAAAA TTGAGCT TTCGTCATCT AGCTCAA CAGAAATTAACTTGC TERM 4218 3572591 - 3572575 - g 78 -5.2 -4.9448 | AGCCACTAAAGAAAA TGATGT TGAAG ACATCA AAGCGAAAACTGAAG dnaK 3570842 - 3572785 + | chaperone Hsp70 in DNA biosynthesis/cell division TERM 4219 3572824 - 3572805 - f 93 -9.2 -4.56597 | opp_overlap 3572805 TCGTTTTTTGAAAAA GCGTCCGA TTTA TCGGGCGC TTTTTTATGTACATT TERM 4220 3572805 - 3572824 + F 100 -11.4 -5.38951 | opp_overlap 3572805 TCGTTTTTTGAAAAA GCGTCCGA TTTA TCGGGCGC TTTTTTATGTACATT ACIAD3656 3573316 - 3573723 + | hypothetical protein TERM 4221 3573742 - 3573776 + T 85 -10.3 -3.42702 | gap 2, opp_overlap 3573748, overlap 3573748 TGAAATCTTGCAGAT GA-AAAAGGTCTGA-CC CAT GGATCAGACCTTTTCTC TATTATTGCATCATC TERM 4222 3573769 - 3573748 - T 100 -10.9 -4.8048 | opp_overlap 3573742 3573748 CTTGCAGATGAAAAA GGTCTGACC CATG GATCAGACC TTTTCTCTATTATTG TERM 4223 3573748 - 3573769 + T 100 -9.5 -4.73633 | gap 1, opp_overlap 3573748, overlap 3573742 CTTGCAGATGAAAAA GGTCTGA-CC CAT GGATCAGACC TTTTCTCTATTATTG ACIAD3657 3575074 - 3573779 - | putative membrane-bound lytic murein transglycosylase TERM 4224 3574145 - 3574124 - G 70 -2.9 -4.93696 | gap 1, overlap 3574125 TTTAAAGACCAAAAA TGCAGG-ACC ATT GGCACCTGCT GGCATCATTAAACCT TERM 4225 3575284 - 3575317 + r 70 -4.2 -4.81083 | opp_overlap 3575285 3575291, overlap 3575285 TCAAAATTGAAATGC ATTTAAATTTAAAA TCAAAC TTTTAAATTTAAAC TTTTTGATCGTTAAA TERM 4226 3575600 - 3575581 - R 100 -10 -5.66338 | opp_overlap 3575580 AAAGACAATAAAAAA GCGACCAG CTTG CTGATCGC CTGATTTATAGACCT purK 3576775 - 3575624 - | phosphoribosylaminoimidazole carboxylase ATPase subunit TERM 4227 3576834 - 3576814 - R 75 -6.9 -4.18018 | opp_overlap 3576815 3576830, overlap 3576815 GCGCGTCAGGCAAAA GCTTAAAGC GAC GCTTTAAGT CTGCTTATTCTCACG TERM 4228 3576815 - 3576833 + r 80 -10.4 -3.04443 | opp_overlap 3576814 3576815, overlap 3576830 CGCGTCAGGCAAAAG CTTAAAGC GAC GCTTTAAG TCTGCTTATTCTCAC TERM 4229 3576833 - 3576815 - R 80 -10.4 -3.10597 | opp_overlap 3576815 3576830, overlap 3576814 CGCGTCAGGCAAAAG CTTAAAGC GAC GCTTTAAG TCTGCTTATTCTCAC purE 3577360 - 3576845 - | phosphoribosylaminoimidazole carboxylase, mutase subunit ACIAD3660 3577542 - 3577357 - | hypothetical protein ACIAD3661 3577741 - 3577544 - | hypothetical protein TERM 4230 3577690 - 3577672 - GR 100 -8.8 -5.10968 | opp_overlap 3577672 AGCAAGATACAAAAA GCTCGACA GGA TGTCGGGC TTTTTTTTGATTTTT TERM 4231 3577672 - 3577690 + gr 100 -11 -6.11019 | opp_overlap 3577672 AGCAAGATACAAAAA GCTCGACA GGA TGTCGGGC TTTTTTTTGATTTTT ACIAD3662 3578058 - 3577711 - | hypothetical protein mpl 3578322 - 3579683 + | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase TERM 4232 3579741 - 3579690 - f 71 -7.7 -3.69437 | gap 3, opp_overlap 3579698, overlap 3579678 3579691 3579698 CAAGCTTAAAATTAA GCGCAAAACCAAGTTGGAGTACATCT GGT AGATG-A-TCCAGCTTGGTTTTA-GC ATTCGAAGTGATTAC TERM 4233 3579698 - 3579734 + F 85 -9 -4.19238 | gap 2, opp_overlap 3579690 3579691 3579698 AAATTAAGCGCAAAA CCAAGTTGGAGTACATCT GGT AGATG-A-TCCAGCTTGG TTTTAGCATTCGAAG TERM 4234 3579734 - 3579698 - f 71 -6.8 -4.2237 | gap 2, opp_overlap 3579698, overlap 3579690 3579691 AAATTAAGCGCAAAA CCAAGTTGGAGTACATCT GGT AGATG-A-TCCAGCTTGG TTTTAGCATTCGAAG ACIAD3665 3579807 - 3580451 + | hypothetical protein TERM 4235 3580666 - 3580716 + F 84 -3.6 -5.64274 | gap 3 TCAGTGTAGGCAAGA CCTTGATCATGTTGACTCAGATG TTTTATTT CATCTG-G-CAAC-TGGTCGAGG TTTTTTTATGACTGA ACIAD3666 3580732 - 3581712 + | hypothetical protein TERM 4236 3581730 - 3581760 + T 83 -9.9 -3.81848 | opp_overlap 3581729 3581732 3581734, overlap 3581732 TTAAACGGCATCAAT CAGACCTTTTATC CTGCA GATAAAAGGTCTC TTATTCTGGGGTATT TERM 4237 3581758 - 3581732 - T 87 -13.2 -2.79291 | opp_overlap 3581730 3581732, overlap 3581729 3581734 AAACGGCATCAATCA GACCTTTTATCC TGC AGATAAAAGGTC TCTTATTCTGGGGTA TERM 4238 3581732 - 3581758 + T 93 -12.5 -3.48824 | opp_overlap 3581732 3581729 3581734, overlap 3581730 AAACGGCATCAATCA GACCTTTTATC CTGCA GATAAAAGGTC TCTTATTCTGGGGTA TERM 4239 3581756 - 3581734 - T 76 -10 -2.93901 | opp_overlap 3581732 3581730, overlap 3581732 3581729 ACGGCATCAATCAGA CCTTTTATCC TGC AGATAAAAGG TCTCTTATTCTGGGG ACIAD3667 3582432 - 3581761 - | hypothetical protein TERM 4240 3582491 - 3582505 + G 71 -4.2 -4.74706 | opp_overlap 3582487, overlap 3582489 3582487 3582486 CCCATTCAGAAGACC GTGATC CGT GGTCGC TTTTTAGATATTCAG TERM 4241 3582872 - 3582862 - g 73 -5.4 -4.71382 | AGAATTACTGAAAAA TGGT ACA ACCA CTGCTTTGGTATTTT TERM 4242 3583658 - 3583646 - g 70 -7.7 -3.59979 | GTGCTGGATCTCAAA GCAAC CCT GTTGC AACGATTACGTCAAA guaD 3582461 - 3583783 + | guanine deaminase TERM 4243 3583942 - 3583960 + F 95 -8.9 -5.63517 | GATTTATGATTTTGA GGTGTTG CTGGT CAACACC TTTTTTATTTGAAAA hpt 3583969 - 3584529 + | hypoxanthine phosphoribosyltransferase TERM 4244 3584536 - 3584551 + F 95 -9 -5.4492 | opp_overlap 3584536 GGACTCTGATCAAAA TGGTGC ATAT GCACCA TTTTTTGTGTCTATA TERM 4245 3584551 - 3584536 - f 85 -9 -4.26076 | opp_overlap 3584536 GGACTCTGATCAAAA TGGTGC ATAT GCACCA TTTTTTGTGTCTATA TERM 4246 3584604 - 3584588 - f 81 -5.9 -4.88736 | CATTATGCACAAAAA CAATACA GGA TGTATCG GAGTATGCCTTTTTC ACIAD3672 3584696 - 3584950 + | hypothetical protein TERM 4247 3584971 - 3584991 + T 100 -9.8 -5.31877 | opp_overlap 3584967 3584971 CAGAAATTAAATGAA TAGCACCT GACTG AGGTGCTA TTTTTTATGGTACAT TERM 4248 3584991 - 3584971 - T 82 -9.8 -3.67121 | opp_overlap 3584971, overlap 3584967 CAGAAATTAAATGAA TAGCACCT GACTG AGGTGCTA TTTTTTATGGTACAT ACIAD3673 3585817 - 3584996 - | putative thiol:disulfide interchange protein TERM 4249 3585829 - 3585848 + r 83 -5.8 -5.13741 | gap 1, opp_overlap 3585829 CCACCCATAAAAAAA CAGCGTCAT GCT AT-ACGCTG TTTTTATTCAATTGA TERM 4250 3585848 - 3585829 - R 88 -5.8 -5.64274 | gap 1, opp_overlap 3585829 CCACCCATAAAAAAA CAGCGTCAT GCT AT-ACGCTG TTTTTATTCAATTGA ACIAD3674 3587034 - 3585871 - | hypothetical protein ACIAD3675 3588360 - 3587047 - | putative outer membrane protein ACIAD3676 3589977 - 3588370 - | hypothetical protein TERM 4251 3588802 - 3588790 - G 72 -7.7 -3.84451 | TCCCTGAAATTCAAA GCAAG GCA CTTGC CCATAAAATCCAGTC ACIAD3677 3590840 - 3589974 - | hypothetical protein ACIAD3678 3592502 - 3590952 - | MFS superfamily multidrug resistance protein ACIAD3679 3593609 - 3592533 - | putative multidrug resistance efflux pump TERM 4252 3592684 - 3592724 + g 71 -8.3 -3.54543 | opp_overlap 3592692, overlap 3592685 3592691 3592692 TTATCTGGCGGCATC ATCGAGAATGTTGCGCCTG ATG CAGGTGCAAAACTTTCGAC TTTGCCACGATAGGT TERM 4253 3592685 - 3592723 + g 83 -11.8 -2.72511 | opp_overlap 3592692, overlap 3592684 3592691 3592692 TATCTGGCGGCATCA TCGAGAATGTTGCGCCTG ATG CAGGTGCAAAACTTTCGA CTTTGCCACGATAGG TERM 4254 3592692 - 3592716 + g 70 -9.3 -2.82668 | opp_overlap 3592692, overlap 3592691 3592685 3592684 CGGCATCATCGAGAA TGTTGCGCCTG ATG CAGGTGCAAAA CTTTCGACTTTGCCA TERM 4255 3594015 - 3594038 + r 76 -3.9 -5.24799 | opp_overlap 3594016, overlap 3594008 3594016 GACTTAGATAAAAAA AGCATTTGT AATCAA ACAAATGCC TTTTTATATTTCTCA TERM 4256 3594016 - 3594037 + r 73 -7.4 -3.73253 | opp_overlap 3594016, overlap 3594015 3594008 ACTTAGATAAAAAAA GCATTTGT AATCAA ACAAATGC CTTTTTATATTTCTC TERM 4257 3594037 - 3594016 - R 93 -7.4 -5.72616 | opp_overlap 3594016 3594015 3594008 ACTTAGATAAAAAAA GCATTTGT AATCAA ACAAATGC CTTTTTATATTTCTC trmE 3595453 - 3594065 - | tRNA modification GTPase TrmE TERM 4258 3595488 - 3595461 - R 89 -7.8 -5.35815 | gap 1, opp_overlap 3595461 CAGATCAAATAAAAA TCCGCCTAAG-CG TAA CATCTTAAGCGGA TTGATTCAGCTCTCA oxaA 3597267 - 3595516 - | putative inner membrane protein translocase component YidC ACIAD3682 3597593 - 3597273 - | hypothetical protein rnpA 3597999 - 3597604 - | RNase P C5 component rpmH 3598157 - 3598023 - | 50S ribosomal protein L34