TransTermHP v2.07 (built on Jan 21 2009) 25 bins; sample size is 20000000 --pval-conf=/fs/szasmg2/carlk/TTupdate2/expterm.dat --gc=-2.3 --au=-0.9 --gu=1.3 --mm=3.5 --gap=6 --max-len=59 --min-stem=4 --max-loop=13 --min-loop=3 --uwin-length=6 --uwin-require=3 --max-hp-score=-2 --max-tail-score=-2.5 --loop-penalty=1,2,3,4,5,6,7,8,9,10,11 --start-cut=0 --end-cut=25 Genes: 0.370374 %AT, 4040626 nt, 30731 terms. Intergenic: 0.465681 %AT, H2T: 485606 nt, 4498 terms; T2T: 166452 nt, 3832 terms; H2H: 238307 nt, 3292 terms. Each terminator entry starts in column 3 and is of the form: term # start - end +/- regionconf hp tail | notes Followed by the sequence of the 5' tail, 5' stem, loop, 3' stem, and 3' tail. Genes are interspersed, and start the first column. SEQUENCE gi|117617447|ref|NC_008570.1| Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genome (length 4744448) TERM 1 465 - 509 + G 74 -14.2 -2.64933 | gap 1 TGACATCGGTAATCG TCCCCATCCCGTCGCGGTCGC CAGA GCGCCGGCG-CGGGGTGCGGA TCCTGTGAATAACTC TERM 2 924 - 936 + G 74 -4.8 -4.58283 | TGCCAACAAGGAGCG CTCC CAGGA GGAG TTTTTCCACACCTTC dnaA-1 223 - 1593 + | chromosomal replication initiator protein DnaA dnaN 1677 - 2780 + | DNA polymerase III, beta subunit TERM 3 3170 - 3200 + G 75 -3.8 -4.72272 | overlap 3173 3174 CTGACCGGCGGGCCT CAGGCTCGTCGGGC CTG GCTCGACTGGGGTG TTTTTCATCAGGAGC TERM 4 3274 - 3260 - g 71 -11.4 -3.53012 | CGTCGCCTGCTGAAA CAGCGC AAT GCGCTG CTGCGTCAGAGCAGC TERM 5 3661 - 3672 + G 74 -5.8 -4.45473 | opp_overlap 3660 3661 TTTGAATCAACATAG CAGC CGTG GCTG TATTTTTTTAATTGA recF 2783 - 3886 + | DNA replication and repair protein RecF gyrB 3883 - 6294 + | DNA gyrase, B subunit TERM 6 6323 - 6341 + T 100 -11.7 -6.22802 | opp_overlap 6323 GCTCGATATAAAAAA GCCGCTC CCTGT GAGCGGC TTTTTTTTTCTGGCG TERM 7 6341 - 6323 - T 100 -11.7 -5.36441 | opp_overlap 6323 GCTCGATATAAAAAA GCCGCTC CCTGT GAGCGGC TTTTTTTTTCTGGCG AHA_0005 6786 - 6409 - | glyoxalase family protein superfamily TERM 8 6700 - 6682 - G 70 -10.2 -3.67517 | CACGAACATGGCAAA GGTGGGGG ACT CCTCCACC GGTGGGCGTCCGAAC AHA_0006 7557 - 6853 - | transcriptional regulator TERM 9 7018 - 6994 - G 74 -9.9 -3.82097 | CCGAAAGTGACGAAA GTCCTGGCGCA GCT CGCACCAGGCC ACCAGTACCCGCACC AHA_0007 7792 - 8205 + | 16 kDa heat shock protein A AHA_0008 8298 - 8735 + | 16 kDa heat shock protein A TERM 10 8757 - 8786 + T 100 -16.5 -4.96848 | opp_overlap 8759, overlap 8759 CGGCGCGCGATAAAC AAGAGAGGCCTGC ATGT GCAGGCCTCTCTG TTTTTGTATCGCCGA TERM 11 8784 - 8759 - T 100 -19.1 -4.06419 | opp_overlap 8757 8759 GCGCGCGATAAACAA GAGAGGCCTGC ATGT GCAGGCCTCTC TGTTTTTGTATCGCC TERM 12 8759 - 8784 + T 100 -19.1 -4.11141 | opp_overlap 8759, overlap 8757 GCGCGCGATAAACAA GAGAGGCCTGC ATGT GCAGGCCTCTC TGTTTTTGTATCGCC avtA 10059 - 8809 - | valine--pyruvate transaminase AHA_0010 11330 - 10506 - | AraC/XylS family transcriptional regulator AHA_0011 10343 - 10576 + | hypothetical protein AHA_0012 11423 - 12550 + | multidrug resistance protein D TERM 13 12582 - 12553 - T 71 -10 -3.59979 | TCGTTCCACGTGAAA CATCAGCTGCCG ATAAAA CGGTAGCCGATG CCGGATTCAGTTTCG AHA_0013 13238 - 12555 - | KDP operon transcriptional regulatory protein KdpE TERM 14 12611 - 12630 + g 73 -11.4 -3.61715 | CGATCAGCGTGGGTT GCTGGGGG TTAT CTCCCAGC TTCTTGCGCAGGCTG TERM 15 13207 - 13195 - G 85 -6.2 -5.03314 | overlap 13196 CTGATCCGCAAAAAA CGGC GGATG GCCG CCTCGTCGTCAATGA AHA_0014 15857 - 13269 - | sensory kinase in two-component regulatory system wtih KdpE TERM 16 13886 - 13918 + g 71 -13.3 -3.07043 | opp_overlap 13875 CATATTCCAGCAGGG TGCTGCCGGCCCCCA TGA TGGTGGCCAGCGGCG TCTTCAGATCGTGGG TERM 17 14341 - 14378 + g 74 -14.9 -2.52676 | gap 1 AGCACCTCTTCCGGG CTGCTGGCGGTG-GCCAG CCC CTGGCTCAGCGACAGCAG TGCATTGCCCAGCTG TERM 18 15953 - 15970 + r 81 -8.3 -4.30844 | opp_overlap 15955, overlap 15955 GTCCCGAACGGCAAG GAGCGCC CTCA GGCGCCC TTTTGATGATCGAGT kdpC 16488 - 15961 - | K+-transporting ATPase, C subunit kdpB 18606 - 16549 - | K+-transporting ATPase, B subunit kdpA 20344 - 18662 - | potassium-transporting ATPase subunit A AHA_0018 20432 - 20355 - | putative K+-transporting ATPase, F subunit KdpF TERM 19 20636 - 20621 - R 100 -11.8 -5.14563 | opp_overlap 20621 GCCGCGATCAAAAAA CCCGGC CTAG GCCGGG TTTGGTAGCAAGTTG TERM 20 20621 - 20636 + r 83 -11.8 -3.737 | opp_overlap 20621 GCCGCGATCAAAAAA CCCGGC CTAG GCCGGG TTTGGTAGCAAGTTG gor 22020 - 20671 - | glutathione-disulfide reductase TERM 21 22096 - 22072 - R 86 -12.2 -3.88291 | gap 1, opp_overlap 22072 22069 22068, overlap 22087 CATGATGGGGATAAA GCGGCTGGCTC ACAA GAGCCAGC-GC TCAGTTATGTTGGAT TERM 22 22072 - 22096 + r 72 -12.2 -2.66522 | gap 1, opp_overlap 22072 22087, overlap 22069 22068 CATGATGGGGATAAA GCGGCTGGCTC ACAA GAGCCAGC-GC TCAGTTATGTTGGAT AHA_0020 24094 - 22097 - | sensor histidine kinase TERM 23 24135 - 24183 + r 70 -3.2 -4.7497 | gap 2, opp_overlap 24147 24181, overlap 24147 24150 TGTCGTGTTTCGTTA GCGT-GATAA-AAACAAGGCCCCG AAA CGGGGCCTTGTTGATTAGGAACGG TTTTTAATGACTCCC TERM 24 24147 - 24169 + r 100 -19.2 -3.33815 | opp_overlap 24147, overlap 24135 24150 TTAGCGTGATAAAAA CAAGGCCCCG AAA CGGGGCCTTG TTGATTAGGAACGGT TERM 25 24169 - 24147 - R 100 -19.2 -4.84359 | opp_overlap 24147 24135 24150 TTAGCGTGATAAAAA CAAGGCCCCG AAA CGGGGCCTTG TTGATTAGGAACGGT TERM 26 24150 - 24166 + r 100 -15.1 -3.81146 | opp_overlap 24147, overlap 24147 24135 GCGTGATAAAAACAA GGCCCCG AAA CGGGGCC TTGTTGATTAGGAAC TERM 27 24233 - 24181 - R 74 -11.3 -3.21099 | opp_overlap 24135 24195, overlap 24229 CTTGTTGATTAGGAA CGGTTTTTAATGACTCCCTTTCGCC TTG GGCGGAATGGATTCGTCAAACACCG GCAGCGGTTTGTGTT AHA_0021 27267 - 24187 - | acriflavin resistance plasma membrane protein AHA_0022 28389 - 27283 - | RND efflux transporter TERM 28 28353 - 28381 + g 75 -3.9 -4.74132 | gap 1, opp_overlap 28332, overlap 28356 TGCCGAACAGGGCCA GCGCGATGAGCA ACATGA TGCTCATC-CAC TTTTTCATGAACTCT AHA_0023 29045 - 28422 - | TetR family transcriptional regulator TERM 29 28956 - 28970 + g 71 -5.7 -4.34486 | GAGTACTTCATGAGC CGCAT CGAAA ATGCG TTCTTTCTTGTTCAT TERM 30 29573 - 29592 + H 73 -6.4 -4.45168 | overlap 29569 TTGCTGTATGACGAG GATGACCG TTCA TGGTCGTC TTTGTGTTTTGAAAA TERM 31 29625 - 29612 - H 73 -5.3 -4.64861 | TGTTTTGAAAAGAAA GCTTT TTTT AAAGC CTCGGTGATTAGCGC TERM 32 29710 - 29739 + H 84 -13.7 -3.0636 | opp_overlap 29717, overlap 29717 TCACCGACCACATTC TGAAAAACCCCGC TCAG GCGGGGTTTTTTG CTTTCTGTCGTCTGC TERM 33 29717 - 29732 + H 100 -11.8 -5.4387 | opp_overlap 29717, overlap 29710 CCACATTCTGAAAAA CCCCGC TCAG GCGGGG TTTTTTGCTTTCTGT TERM 34 29732 - 29717 - H 100 -11.8 -4.61231 | opp_overlap 29717 29710 CCACATTCTGAAAAA CCCCGC TCAG GCGGGG TTTTTTGCTTTCTGT TERM 35 29758 - 29771 + H 74 -8.1 -4.05747 | TCTGTCGTCTGCCAG CCTGC TGCC GCAGG TTTCTGTCACGTCTG AHA_0028 29998 - 30399 + | ricin-type beta-trefoil lectin domain-containing protein TERM 36 30402 - 30386 - T 77 -8 -4.19506 | AGCTGAACCTGAAAA GCCTCA TCTGG TGAGGC ATCAGGCCAACCTGG pyk-1 31483 - 30404 - | pyruvate kinase TERM 37 30941 - 30959 + g 70 -10.2 -3.57039 | opp_overlap 30923 GGCCTCGAGCAGGCG GGCCGTCA GGA TGTCGGCC TTGTCCTTGTCGGTC TERM 38 31541 - 31508 - R 100 -21.1 -4.25104 | opp_overlap 31515 31540, overlap 31509 CTGTTGCGAGGAAAA TGCACAAGGGTGGCC GACG GGCCACCCTTGTGCT GAACGGGGATCAGTG TERM 39 31540 - 31509 - R 100 -24.6 -3.14848 | opp_overlap 31515, overlap 31508 TGTTGCGAGGAAAAT GCACAAGGGTGGCC GACG GGCCACCCTTGTGC TGAACGGGGATCAGT TERM 40 31515 - 31534 + r 95 -15 -3.40403 | opp_overlap 31509 31508 GAGGAAAATGCACAA GGGTGGCC GACG GGCCACCC TTGTGCTGAACGGGG AHA_0030 32888 - 31551 - | sugar phosphate permease TERM 41 33146 - 33135 - H 72 -3.6 -4.72696 | TGGAAATAAAAATAA CGGC ATGT GCCA AATATTAGATGTACT TERM 42 33441 - 33455 + G 100 -5.6 -5.40474 | AGTCGATATTATCAT GTCGTC ATC GCCGAC TTTTTTTAACACGCT AHA_0031 33247 - 34461 + | ABC-type Fe3+ transport system, periplasmic component TERM 43 35909 - 35927 + G 83 -8 -4.59773 | CACCCTGGCCTGTGG GCTGGGTG AGG CGCCCCGC TTTTTGCACCTCAAC AHA_0032 34458 - 36890 + | phosphoglycerate transport regulatory protein PgtB AHA_0033 36874 - 38151 + | C4-dicarboxylate transport transcriptional regulatory protein DctD AHA_0034 38203 - 38517 + | hypothetical protein TERM 44 38527 - 38559 + T 95 -14.1 -3.48276 | overlap 38492 38491 38528 CGCTGAATGGGGTTG TGCGCCATGAGCCGC AGA GTTGCTCATGGCGCC TTGTCTCAGGCGACG TERM 45 38528 - 38558 + T 90 -17.6 -2.68823 | overlap 38492 38491 38527 GCTGAATGGGGTTGT GCGCCATGAGCCGC AGA GTTGCTCATGGCGC CTTGTCTCAGGCGAC AHA_0035 39377 - 38565 - | Cof family hydrolase TERM 46 39432 - 39403 - R 93 -12.9 -3.95584 | opp_overlap 39398 GGGTTACGAATGAAA GCGGGAGCAGT GTACAGCA ACCGCTCCCGC TACCCCATTTATTTA TERM 47 39474 - 39464 - R 70 -3.2 -4.77122 | overlap 39467 GGATACAAAAAATAA CCAG CCG CTAG TAGCGTGCGAAGAAG AHA_0036 40511 - 39471 - | lysophospholipase L2 AHA_0037 41173 - 40508 - | chloramphenicol acetyltransferase AHA_0038 41934 - 41173 - | tRNA guanosine-2'-O-methyltransferase TERM 48 41964 - 41982 + r 72 -11.7 -2.83677 | opp_overlap 41962 41961, overlap 41970 CACAGGATCAAATCG GGCTGGC GCCGG GCCAGCC TGTCGTAAATTCGTT TERM 49 42128 - 42102 - R 80 -8.7 -4.07568 | gap 1, opp_overlap 42101 42103, overlap 42103 42105 CTTGTCTCTTGAAAA GCAGCAGGCGGC TTGC GCCGCCTG-TGG TCAGTTTTTCTGTCG TERM 50 42103 - 42128 + r 79 -12.5 -2.90854 | opp_overlap 42102 42103 42105, overlap 42101 TTGTCTCTTGAAAAG CAGCAGGCGGC TTGC GCCGCCTGTGG TCAGTTTTTCTGTCG TERM 51 42127 - 42103 - R 76 -12.2 -3.04398 | gap 1, opp_overlap 42103 42101, overlap 42102 42105 TTGTCTCTTGAAAAG CAGCAGGCGGC TTGC GCCGCCTG-TG GTCAGTTTTTCTGTC TERM 52 42126 - 42105 - R 72 -11.5 -3.08032 | opp_overlap 42103 42101, overlap 42103 42102 GTCTCTTGAAAAGCA GCAGGCGGC TTGC GCCGCCTGT GGTCAGTTTTTCTGT AHA_0039 44246 - 42129 - | guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase ((ppGpp)ase) TERM 53 44368 - 44341 - R 100 -15.6 -3.32294 | overlap 44343 GTAAATGGGGGAGAA CAGTCGGCACCC GGGC GGGCGCCGACTA TAAGAAATAACTGAC TERM 54 44366 - 44343 - R 100 -16 -3.22668 | overlap 44341 AAATGGGGGAGAACA GTCGGCACCC GGGC GGGCGCCGAC TATAAGAAATAACTG rpoZ 44659 - 44384 - | DNA-directed RNA polymerase, omega subunit AHA_0041 45593 - 44739 - | guanylate kinase TERM 55 45542 - 45520 - G 100 -14.2 -5.60993 | TGGCGGATAAAAAAA CGGCCGGAAT CAT ATTCCAGCCG ATCAAAGTATTCGTA TERM 56 45643 - 45657 + r 70 -10 -3.33696 | ATCCCTGCTTCACTG CTCGGA AAT TCCGAG TTGCTTCCCGGCGGG AHA_0042 46719 - 45637 - | lipopolysaccharide heptosyltransferase kdkA 46888 - 47601 + | 3-deoxy-D-manno-octulosonic-acid kinase AHA_0044 47729 - 48535 + | sensory box/GGDEF family protein, putative TERM 57 48595 - 48562 - T 75 -12.5 -2.64616 | gap 1 CGCTCACTTACACCA TGACGCTGGCATACCC AGA GGG-AGGCCAGCATCA GCAGGCCGCCCAGGG AHA_0045 49397 - 48543 - | hypothetical protein AHA_0046 49441 - 49899 + | hypothetical protein TERM 58 49968 - 49952 - T 100 -15.1 -5.60993 | GCTGGCATAAAAAAA CCGGCGC AGA GCGCCGG TAGAAGGGACAAATC AHA_0047 50215 - 50054 - | hypothetical protein AHA_0048 51129 - 50200 - | hypothetical protein TERM 59 51929 - 51955 + G 84 -15.9 -3.31792 | GGTCGCTATCTGGTG GTGGTGCCCGA GATGA TCGGGCGCCAC TTCTGCCGCTACTAC AHA_0050 51191 - 52165 + | LysR family transcriptional regulator trpS-1 53157 - 52144 - | tryptophanyl-tRNA synthetase II TERM 60 53204 - 53233 + r 83 -6.3 -4.87133 | opp_overlap 53206 53209, overlap 53206 CGACAAAGGGATGAA AACAATGACCGCC TCTC GGCGGTCACGGTG TTTTCTTTGGGGAAT TERM 61 53206 - 53231 + r 76 -8.9 -4.05678 | opp_overlap 53206 53209, overlap 53204 ACAAAGGGATGAAAA CAATGACCGCC TCTC GGCGGTCACGG TGTTTTCTTTGGGGA TERM 62 53231 - 53206 - R 91 -11.1 -4.33767 | opp_overlap 53206 53204, overlap 53209 ACAAAGGGATGAAAA CAATGACCGCC TCTC GGCGGTCACGG TGTTTTCTTTGGGGA TERM 63 53228 - 53209 - R 100 -13.6 -4.2693 | opp_overlap 53206 53204, overlap 53206 AAGGGATGAAAACAA TGACCGCC TCTC GGCGGTCA CGGTGTTTTCTTTGG TERM 64 53291 - 53262 - R 73 -5 -4.61199 | gap 1, overlap 53265 ATTTTACATAGAAAA GCAGTGCCGC-CT GTTTA AGAGCAGCACCAC CAGTAGTTGTGATTG AHA_0051 53783 - 53349 - | universal stress protein A TERM 65 54044 - 54060 + H 100 -9.4 -5.35224 | opp_overlap 54036 CTGAATACCGCTTTG GGGAGC CTCGC GCTCCC TTTTGTTTTTCTGCC AHA_0052 54250 - 55437 + | trans-2-enoyl-CoA reductase AHA_0053 57243 - 55453 - | TPR repeat-containing protein AHA_0054 57348 - 57977 + | ferritin TERM 66 58035 - 58014 - f 79 -13 -2.86747 | opp_overlap 58014, overlap 58011 CAGCCAGTACAATGA CGGCCCCT CTCAAC AGGGGCCG TTTGCTATTGCGGCA TERM 67 58014 - 58035 + F 93 -13 -3.92324 | opp_overlap 58014 58011 CAGCCAGTACAATGA CGGCCCCT CTCAAC AGGGGCCG TTTGCTATTGCGGCA AHA_0055 58135 - 59322 + | hypothetical protein TERM 68 59456 - 59474 + T 100 -17.4 -5.31456 | opp_overlap 59449 CTCATCAACTTCAGA CGCGGCCG CTT CGGCCGCG TTTTTTATGGGTTGC AHA_0056 60730 - 59510 - | fosmidomycin resistance protein TERM 69 61496 - 61511 + G 72 -2.5 -4.74801 | gap 1, overlap 61497 CGCCAGACTCGGCAA C-GGCC TCATC GGCCTG TTTTTCATGGGCTTC AHA_0057 60918 - 61556 + | leucine export protein LeuE AHA_0058 62346 - 61600 - | hypothetical protein TERM 70 61844 - 61832 - GT 70 -6.9 -4.18197 | overlap 61836 AGCTGGTATTGAAAA CGCAC CTG GCGCG GGCGTACCACCAGGG AHA_0059 63905 - 62289 - | hypothetical protein TERM 71 63420 - 63410 - GR 70 -6.8 -4.07568 | overlap 63411 TCTCTCGGTTCAAAA TGCC CCC GGCA GGCATGGTGCGAAGA AHA_0060 66385 - 63908 - | hypothetical protein AHA_0061 67102 - 66437 - | hypothetical protein TERM 72 67139 - 67124 - R 81 -11.8 -3.59979 | TCCTGTGATTGCAAA GGGCCC CGCA GGGCCC CGAATACTATGCGTC matB 67737 - 67162 - | fimbrillin MatB TERM 73 68000 - 68011 + H 100 -2.2 -6.01725 | TAAGACTTGTCCATT CTCT TATC AGGG TTTTTTGTTTTTCTT TERM 74 68612 - 68586 - g 77 -13.8 -3.29263 | opp_overlap 68590, overlap 68590 ATATTGTCTGCACAA GCAACGCATCAT ATT ATGGTGCGTTGC CTGCAAGCCGGTGCC evgA 68337 - 68960 + | positive transcription regulator EvgA TERM 75 69405 - 69380 - g 76 -9.9 -3.91897 | gap 1, opp_overlap 69384, overlap 69385 TTGTTGACCGATAAA TATAT-GCCGGA TGA TCCGGCCATATA TAAGAATATACACGT TERM 76 70914 - 70934 + G 71 -8.9 -3.92869 | overlap 70915 ATCATCGTCTCTCCA TGGCGACGG GGT CCGTGGCCG TTTATCACTGGGTAC TERM 77 71521 - 71508 - g 90 -8.1 -4.86621 | AGTTGCAATCAAAAA CCAGC GACG GCTGG TGCACCTTGCAACTG TERM 78 71583 - 71595 + G 83 -9.1 -4.25104 | opp_overlap 71583, overlap 71566 CTGCGGAGCAAGCCA GGCTG TTT CAGCC TTTTGGTCAGGCCAG AHA_0064 68963 - 72550 + | virulence sensor protein BvgS TERM 79 72578 - 72554 - T 83 -8.6 -4.43309 | opp_overlap 72558, overlap 72555 GAACCGGAATGAAAA TGAAGGCATG ACGGG CATGCCTTCC TGGATGGTCAACCGT TERM 80 72577 - 72555 - T 78 -12.1 -3.25262 | opp_overlap 72558, overlap 72554 AACCGGAATGAAAAT GAAGGCATG ACGGG CATGCCTTC CTGGATGGTCAACCG AHA_0065 73026 - 72586 - | hypothetical protein AHA_0066 73217 - 74872 + | sensor histidine kinase AHA_0067 75002 - 75733 + | response regulator receiver domain-containing protein AHA_0068 75855 - 77033 + | inner membrane protein YhjX TERM 81 77089 - 77059 - T 83 -14.8 -2.63723 | opp_overlap 77064, overlap 77064 GTCGCAGCAAGCAAT GAAAAGACCCGGAC CTG GCCCGGGTCTTTTT TATGCGCGGCTCATT TERM 82 77064 - 77084 + T 100 -12.5 -5.24129 | opp_overlap 77064 77059 AGCAAGCAATGAAAA GACCCGGAC CTG GCCCGGGTC TTTTTTATGCGCGGC TERM 83 77084 - 77064 - T 100 -14.7 -4.50193 | opp_overlap 77064, overlap 77059 AGCAAGCAATGAAAA GACCCGGAC CTG GCCCGGGTC TTTTTTATGCGCGGC purK 78231 - 77107 - | phosphoribosylaminoimidazole carboxylase ATPase subunit TERM 84 78194 - 78178 - G 72 -13.7 -2.80016 | opp_overlap 78191, overlap 78175 GGCCATCACGAAGTA GCGGCCA AGT TGGCCGC CTCCCAGCATGCCGA purE-1 78737 - 78228 - | phosphoribosylaminoimidazole carboxylase, catalytic subunit TERM 85 78801 - 78784 - R 100 -12.7 -4.56597 | opp_overlap 78782 78781 TCTGGTTGGCAAAAA GAGCCGG CAAG CCGGCTC AGAATTTTTCGGGTC AHA_0071 79102 - 78800 - | hypothetical protein AHA_0072 80180 - 79107 - | sodium bicarbonate cotransporter TERM 86 80638 - 80690 + GH 74 -10.5 -3.55761 | gap 2, opp_overlap 80624 80621, overlap 80634 80635 80636 ACGAGCTGGGACGCA GCCC-GCTG-GCGCTGTTTGCCAGC CCCGA GCTGGCCGCCAGGGCACGGCAGGGC TTTCCCGCCTCCCTC AHA_0073 80145 - 81047 + | regulatory protein, LysR:LysR, substrate-binding AHA_0074 81312 - 83147 + | vitamin B12 transporter BtuB TERM 87 83210 - 83182 - f 85 -4.3 -5.18995 | opp_overlap 83185 83186, overlap 83183 83186 AAGAGAAGATAAAAA GCGAGGCCCCGCC ATT GGTGGGGCCTTTT CTATTGGCGGTCGGC TERM 88 83206 - 83186 - f 81 -13.9 -2.92461 | opp_overlap 83185 83186, overlap 83183 83182 GAAGATAAAAAGCGA GGCCCCGCC ATT GGTGGGGCC TTTTCTATTGGCGGT TERM 89 83186 - 83206 + F 100 -16.1 -4.66938 | opp_overlap 83186 83183 83182, overlap 83185 GAAGATAAAAAGCGA GGCCCCGCC ATT GGTGGGGCC TTTTCTATTGGCGGT TERM 90 83893 - 83923 + G 71 -9.6 -3.72576 | overlap 83894 ATTCCGGCAGTGCGG TCGCCAAGCGGGTG GCT CACCTGCTGGCCGG TTTGGTAACGACACC TERM 91 84036 - 84003 - g 79 -10.9 -3.95073 | opp_overlap 84009, overlap 84004 GCCCAGACCCAGAAA CTGACAGCCCCCTTG CAAG CTTGGGGGCTGTCAT CACTCGAAGAGGTCA TERM 92 84035 - 84004 - g 77 -14.4 -2.96722 | opp_overlap 84009, overlap 84003 CCCAGACCCAGAAAC TGACAGCCCCCTTG CAAG CTTGGGGGCTGTCA TCACTCGAAGAGGTC murI 83265 - 84059 + | glutamate racemase AHA_0076 84569 - 84078 - | RNA-binding protein TERM 93 84622 - 84603 - H 81 -2.2 -5.41359 | gap 1 AATGAAAGCAAAAAA GGTGCAACA CTC TATT-CACC TCCATGGTAACCAGC TERM 94 84955 - 84942 - H 75 -3.8 -4.86731 | opp_overlap 84942, overlap 84943 GGCGCCGAAAGAAAA GCGA AAACAA TCGC TTGACTTTCGAAGTG TERM 95 85122 - 85108 - H 71 -8.6 -3.80114 | GATGAAGTGACCAAA GCAACT TTT AGTTGC AGCAGTTAATTCAGC TERM 96 86932 - 86909 - H 83 -9.6 -4.21194 | CGCCATTACCCAAAA TCTGCACTGC TAAC GCAGCGCAAA GATGATTTTGGGTCC TERM 97 87044 - 87072 + H 87 -8.3 -4.65747 | overlap 87071 TTGCTAACAAGAATG CAGATATAAGCAT TAC GTGTTTATGTCTG TTTTCTTCGGCCTTG TERM 98 87200 - 87186 - H 74 -7.2 -4.07687 | opp_overlap 87176 87186 87180 ACTTCTTGGCGAAAA CCAAAT TTT ATTTGG TCCTTGTTGTACGAC TERM 99 87248 - 87218 - H 73 -10.4 -3.40403 | opp_overlap 87224, overlap 87221 CTTGTTGTACGACAA CAAGCTGTGCCGGT TTC ACCGACACTTCTTG GGGTTGTATGGTTAA TERM 100 87224 - 87242 + H 70 -8.8 -3.70081 | opp_overlap 87221 87218 GTACGACAACAAGCT GTGCCGGT TTC ACCGACAC TTCTTGGGGTTGTAT TERM 101 87746 - 87734 - H 84 -9.1 -4.2354 | GAAAGGCGAAAAGAA CCCCT GTG AGGGG AGTGAAATAGAACCT TERM 102 90575 - 90592 + H 100 -12.7 -5.37043 | opp_overlap 90575 CCATTAAATATCAAA GCCTCCC AATC GGGAGGC TTTTTTGTATCCGCT TERM 103 90592 - 90575 - H 93 -12.7 -4.02719 | opp_overlap 90575 CCATTAAATATCAAA GCCTCCC AATC GGGAGGC TTTTTTGTATCCGCT codA 90960 - 92225 + | cytosine deaminase TERM 104 92335 - 92366 + G 76 -10 -3.83026 | gap 1, overlap 92336 CCTGGTTATATGTTG CCGCCGGCGGG-GCC ATC GGCGCCTGCCTGCGC TTTGGTATCGCCGAA TERM 105 92336 - 92365 + G 74 -13.5 -2.89602 | gap 1, overlap 92335 CTGGTTATATGTTGC CGCCGGCGGG-GCC ATC GGCGCCTGCCTGCG CTTTGGTATCGCCGA crcB 92274 - 92690 + | CrcB protein AHA_0084 92756 - 93508 + | ubiquinone/menaquinone biosynthesis methyltransferase UbiE AHA_0085 93517 - 94125 + | hypothetical protein ubiB 94125 - 95765 + | putative ubiquinone biosynthesis protein UbiB tatA 95806 - 96054 + | twin argininte translocase protein A tatB 96058 - 96501 + | twin arginine-targeting protein translocase TatB tatC 96498 - 97253 + | twin arginine-targeting protein translocase TatC TERM 106 97239 - 97266 + F 93 -12 -4.25283 | opp_overlap 97235 97242, overlap 97242 AAGCAGGAACAGACT GAAGAGGGGAGC TAAG GCTCCCTTCCTC TTTTCATGCCCCCGT TERM 107 97242 - 97263 + F 72 -12.3 -2.83504 | opp_overlap 97242 97235, overlap 97239 CAGGAACAGACTGAA GAGGGGAGC TAAG GCTCCCTTC CTCTTTTCATGCCCC AHA_0090 97365 - 98150 + | deoxyribonuclease TatD hemB 98154 - 99173 + | delta-aminolevulinic acid dehydratase TERM 108 99192 - 99227 + F 86 -11.8 -3.83502 | opp_overlap 99200, overlap 99194 99197 99200 AGCTTGCCTGATGTC ACCCACAATGCCGGCC CCTG GGCCGGCATTGTCGTC TTTGGTATCCGGATC TERM 109 99194 - 99225 + F 100 -18.8 -3.5032 | opp_overlap 99200, overlap 99192 99197 99200 CTTGCCTGATGTCAC CCACAATGCCGGCC CCTG GGCCGGCATTGTCG TCTTTGGTATCCGGA TERM 110 99197 - 99222 + F 100 -19.1 -2.88959 | opp_overlap 99200, overlap 99194 99192 99200 GCCTGATGTCACCCA CAATGCCGGCC CCTG GGCCGGCATTG TCGTCTTTGGTATCC TERM 111 99200 - 99219 + F 95 -15 -3.57908 | opp_overlap 99200, overlap 99197 99194 99192 TGATGTCACCCACAA TGCCGGCC CCTG GGCCGGCA TTGTCGTCTTTGGTA TERM 112 99219 - 99200 - f 95 -15 -3.36327 | opp_overlap 99200 99197 99194 99192 TGATGTCACCCACAA TGCCGGCC CCTG GGCCGGCA TTGTCGTCTTTGGTA prlC 99396 - 101438 + | oligopeptidase A TERM 113 101498 - 101508 + F 73 -5.4 -4.62069 | TGCCACATAGTGGGA TCAC AGC GTGA TTTTTGAGATAAAAA TERM 114 101524 - 101539 + F 93 -10.4 -4.39002 | opp_overlap 101524, overlap 101538 TTTTTGAGATAAAAA GGGACC TTTT GGTCCC TTTTCTCAAGGCTTT TERM 115 101539 - 101524 - f 100 -10.4 -4.96848 | opp_overlap 101524 101538 TTTTTGAGATAAAAA GGGACC TTTT GGTCCC TTTTCTCAAGGCTTT AHA_0093 101643 - 104186 + | MorA AHA_0094 104281 - 105027 + | hypothetical protein TERM 116 105047 - 105085 + T 81 -12.5 -3.12142 | gap 1, opp_overlap 105049 105052, overlap 105045 105044 105054 GCACGCGAGGGATAA AAG-AAGAGGGCCAACCC GATG GGGTTGGCCCTCTTGCCA TCTATTGGCTGTCGG TERM 117 105082 - 105049 - T 100 -19.7 -4.42653 | opp_overlap 105047 105045 105044 105054, overlap 105052 ACGCGAGGGATAAAA GAAGAGGGCCAACCC GATG GGGTTGGCCCTCTTG CCATCTATTGGCTGT TERM 118 105079 - 105052 - T 100 -21.4 -4.33182 | opp_overlap 105047 105045 105044 105054, overlap 105049 CGAGGGATAAAAGAA GAGGGCCAACCC GATG GGGTTGGCCCTC TTGCCATCTATTGGC TERM 119 105054 - 105077 + T 100 -18.2 -3.09648 | opp_overlap 105052 105049, overlap 105047 105045 105044 AGGGATAAAAGAAGA GGGCCAACCC GATG GGGTTGGCCC TCTTGCCATCTATTG AHA_0095 106371 - 105382 - | hypothetical protein AHA_0096 108058 - 106568 - | guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase AHA_0097 109362 - 108073 - | ATP-dependent RNA helicase RhlB TERM 120 109417 - 109429 + H 77 -7.7 -4.258 | opp_overlap 109417 109416, overlap 109427 GATCATTTCAAATAG GGCAA CTA TTGCC TTTGTTGATACGTCA trx 109476 - 109802 + | thioredoxin TERM 121 109807 - 109842 + F 93 -10.6 -4.4009 | gap 1, opp_overlap 109811 109813, overlap 109813 GTAACCTGTAATAAT CAAAGAGGAGCGCATTG CAA TAATGCGCTCCT-TCTG TTTTATCACCTAGAC TERM 122 109839 - 109811 - f 91 -11.8 -4.07618 | opp_overlap 109807 109813, overlap 109813 CCTGTAATAATCAAA GAGGAGCGCATT GCAAT AATGCGCTCCTT CTGTTTTATCACCTA TERM 123 109837 - 109813 - f 95 -14.4 -3.62957 | opp_overlap 109807 109813, overlap 109811 TGTAATAATCAAAGA GGAGCGCATT GCAAT AATGCGCTCC TTCTGTTTTATCACC TERM 124 109813 - 109837 + F 100 -15.1 -4.02581 | opp_overlap 109813 109811, overlap 109807 TGTAATAATCAAAGA GGAGCGCATTG CAA TAATGCGCTCC TTCTGTTTTATCACC rho 110010 - 111275 + | transcription termination factor Rho TERM 125 111296 - 111313 + F 100 -10.5 -5.4433 | opp_overlap 111296 TCGAAAATCATCAAA CCGCGGC CCAG GTCGCGG TTTTTGTTTATCTAT TERM 126 111313 - 111296 - f 74 -8.3 -3.93057 | opp_overlap 111296 TCGAAAATCATCAAA CCGCGGC CCAG GTCGCGG TTTTTGTTTATCTAT AHA_0100 111589 - 112389 + | hypothetical protein AHA_0101 112420 - 113889 + | 3-octaprenyl-4-hydroxybenzoate carboxy-lyase TERM 127 114304 - 114270 - g 93 -14.2 -4.09685 | CGCCACCCCGGAAAA CGCCTATGCCGGCCAG GTG CTGGCCCGCATGCGCG AGCAGGGGGAGATCG TERM 128 114386 - 114398 + G 73 -3.3 -4.8048 | CGCTGATCCTGATGG CGGGT GGC ACCGG TTTTTCCTATGCCCG fre 114058 - 114756 + | FMN reductase TERM 129 114842 - 114868 + T 100 -15.2 -3.86015 | opp_overlap 114843 114847, overlap 114843 114847 GGCAGGCCAGAAACA ACAAACCCCAGC CTG GCTGGGGTTTGC TTTATGGGCGACCTG TERM 130 114843 - 114867 + T 100 -18.7 -2.91395 | opp_overlap 114843 114847, overlap 114842 114847 GCAGGCCAGAAACAA CAAACCCCAGC CTG GCTGGGGTTTG CTTTATGGGCGACCT TERM 131 114867 - 114843 - T 100 -18.7 -4.07877 | opp_overlap 114843 114842 114847, overlap 114847 GCAGGCCAGAAACAA CAAACCCCAGC CTG GCTGGGGTTTG CTTTATGGGCGACCT TERM 132 114847 - 114863 + T 100 -13.7 -4.13995 | opp_overlap 114843 114847, overlap 114843 114842 GCCAGAAACAACAAA CCCCAGC CTG GCTGGGG TTTGCTTTATGGGCG TERM 133 114863 - 114847 - T 100 -13.7 -4.63048 | opp_overlap 114847 114843 114842, overlap 114843 GCCAGAAACAACAAA CCCCAGC CTG GCTGGGG TTTGCTTTATGGGCG AHA_0103 115143 - 114886 - | hypothetical protein AHA_0104 115445 - 117862 + | extracellular lipase TERM 134 117877 - 117905 + T 100 -13.9 -4.09685 | opp_overlap 117882, overlap 117882 AGCCAGTCGGCCAAT AAAAACGCCGCCC TCG GGGTGGCGTTTTG TTTTCCAGCATCGCA TERM 135 117900 - 117882 - T 100 -11.6 -5.06414 | opp_overlap 117877 117882 GTCGGCCAATAAAAA CGCCGCCC TCG GGGTGGCG TTTTGTTTTCCAGCA TERM 136 117882 - 117900 + T 100 -13.8 -5.07652 | opp_overlap 117882, overlap 117877 GTCGGCCAATAAAAA CGCCGCCC TCG GGGTGGCG TTTTGTTTTCCAGCA AHA_0105 118835 - 118002 - | GlpG protein AHA_0106 119155 - 118832 - | thiosulfate sulfurtransferase GlpE AHA_0108 119226 - 119912 + | amino acid transporter LysE AHA_0107 120742 - 119909 - | AraC family transcriptional regulator TERM 137 120031 - 120003 - G 76 -8.8 -4.11216 | gap 1 GCCTGATCGGCAAAA CCGCTGGCCAGCG CCAC CTCC-GCCAGCGG CTCTCCCCGCTTGAG AHA_0109 121447 - 120746 - | high-affinity branched-chain amino acid ABC transporter, ATP-binding protein LivF livG 122231 - 121458 - | leucine/isoleucine/valine transporter ATP-binding subunit livM 123499 - 122228 - | leucine/isoleucine/valine transporter permease subunit TERM 138 122959 - 122945 - G 75 -4.2 -4.74801 | GAAGCCGAGCAAAAA GCCG AAGGTGG CGGC CGTCAGCCCGGCGAT AHA_0112 124422 - 123496 - | high-affinity branched-chain amino acid transport system permeaseprotein LivH TERM 139 124255 - 124216 - G 71 -9.2 -3.75024 | CCCCAGCAGCAAGAA GGTGCTGTCGATGCCCAT CATC ATGAGCCCCGCCATCACC ATGAAAGCGACATAG TERM 140 124479 - 124454 - R 85 -8.9 -4.41348 | overlap 124457 TTGCCCGCAAAGAAA GGAGGGGTGAC TCAT GTCACCCCGAC CGGCAGATTATTTGA TERM 141 124476 - 124457 - R 87 -13.6 -3.18452 | overlap 124454 CCCGCAAAGAAAGGA GGGGTGAC TCAT GTCACCCC GACCGGCAGATTATT AHA_0113 125590 - 124487 - | Leu/Ile/Val-binding protein TERM 142 125365 - 125399 + g 72 -13.6 -2.75957 | overlap 125367 125375 CCACGGCCTGCTTGG GATCGCAGGCGTCGTC ATA GATGACGGCTTCGATC TGCTTGCCCTTGATG TERM 143 126752 - 126767 + G 74 -11.8 -3.46068 | overlap 126750 ATCCTGGCCCTCAAG CCGCGG CCGA CCGCGG TGTTTGCCTTCGACG AHA_0114 126044 - 127048 + | ribose operon repressor TERM 144 127104 - 127075 - T 95 -15.1 -3.74361 | opp_overlap 127080, overlap 127080 CATAGCCATCAACAA GAAAACCCCCTCG CCAG CGAGGGGGTTTTT GTTTGGCCCGCGTTT TERM 145 127080 - 127099 + T 100 -15 -5.27335 | opp_overlap 127075 127080 CCATCAACAAGAAAA CCCCCTCG CCAG CGAGGGGG TTTTTGTTTGGCCCG TERM 146 127099 - 127080 - T 100 -15 -4.92757 | opp_overlap 127080, overlap 127075 CCATCAACAAGAAAA CCCCCTCG CCAG CGAGGGGG TTTTTGTTTGGCCCG AHA_0115 128437 - 127118 - | maltose-6'-phosphate glucosidase AHA_0116 130026 - 128440 - | pts system maltose-specific eiicb component TERM 147 128708 - 128718 + g 78 -3.2 -5.0133 | opp_overlap 128710, overlap 128695 TGGCCGGCAATATCA TAGC CGC GCTG TTTTTTGGCGGCCTG TERM 148 129076 - 129115 + g 100 -16.5 -4.03586 | CCCCACCAGCATGGC GGTCAGGGTGGCCGG GATCAGCAGG CCGGCCACCTTGGCC TTGTTCTCTTTGGCG TERM 149 129552 - 129535 - G 74 -9.1 -3.89501 | overlap 129525 GAAGATGCCGAGAAA GACCGGC AGCT GCCGATC GAACAACCGGTTGTG TERM 150 129898 - 129883 - G 78 -3.2 -5.07053 | overlap 129870 129867 AACTATTTGAAAAAA CAGTCC CTGA GGATTG GCCAGCGTCTCTCCC TERM 151 129910 - 129925 + g 74 -4.7 -4.60889 | ATTGGCCAGCGTCTC TCCCA CGAACA TGGGA TTTTTCAGCATGATT TERM 152 130281 - 130263 - H 73 -5.9 -4.41348 | GCTGGTTGAAATAAA GGCGATC GAATT GGTCGCC ACCCGGGCTGGGTAA AHA_0117 130311 - 131018 + | GntR family transcriptional regulator TERM 153 131049 - 131068 + T 100 -15 -5.33405 | TGCTATGTATGCCAA CCCCCTCG CCAG CGAGGGGG TTTTTGTTTGATGGG AHA_0118 132625 - 131099 - | anaerobic nitric oxide reductase transcription regulator TERM 154 132960 - 132927 - g 70 -11.9 -3.17392 | gap 1, overlap 132930 132957 132958 CATCCGCGAAGGGAA GAACGTGCTGATCGAC ACC GTCGATCA-CAAGTTC AGCCGCGAGTTCGTG norV 132796 - 134283 + | anaerobic nitric oxide reductase flavorubredoxin norW 134280 - 135446 + | nitric oxide reductase AHA_0121 135498 - 135839 + | tellurite resistance protein TehB TERM 155 136083 - 136135 + G 71 -9 -3.7511 | gap 2, overlap 136079 136085 GCTCATGCTCTGGCT GC-TGGCGGCGGACAGCCTG-CTCTG GCT CGGCGTCGGGCTGGTGGCCGCCGTGC TTGTCTTCTGGCACC AHA_0122 135961 - 137178 + | iron-sulfur cluster-binding protein TERM 156 138394 - 138380 - g 74 -12.8 -3.33261 | GTTCAAGTTCGACAA CGGCCG TGG CGGCCG TGCCAAGTCGTGGGC AHA_0123 137466 - 138692 + | low affinity tryptophan permease TERM 157 138746 - 138729 - T 100 -14.1 -5.252 | opp_overlap 138729 GACTGCGACAAAAAA CGGCGCC TGAT GGCGCCG TTTTTTATGATGCAG TERM 158 138729 - 138746 + T 100 -14.1 -5.31275 | opp_overlap 138729 GACTGCGACAAAAAA CGGCGCC TGAT GGCGCCG TTTTTTATGATGCAG AHA_0124 139262 - 138783 - | phenylalanyl-tRNA synthetase beta subunit TERM 159 139313 - 139346 + r 83 -14.7 -2.71011 | gap 1 CCTACCAGCAGGTTG CCGTCATGCCCACC CCGGGAT GG-GGGCATGACGG TGGTTGCACGGGCAT AHA_0125 139780 - 139376 - | hypothetical protein AHA_0126 140006 - 140512 + | putative kinase TERM 160 140709 - 140695 - T 71 -4.2 -4.63218 | overlap 140696 GCCTTGTTAATAAAA TGCATG AAG CATGCC TTGGGATCGTATTGG TERM 161 141088 - 141101 + T 70 -3.1 -4.78984 | gap 1, opp_overlap 141074 ATCACTAAGTTGATA GC-GAG AAA CTCCGC TTCTTTTGTTTTTTT TERM 162 141334 - 141351 + T 100 -14.1 -4.8048 | opp_overlap 141334 ATTCAATTAAAAAAA CGGCGCC TTTC GGCGCCG TTTTTGATCTAGCCA TERM 163 141351 - 141334 - T 100 -14.1 -5.64006 | opp_overlap 141334 ATTCAATTAAAAAAA CGGCGCC TTTC GGCGCCG TTTTTGATCTAGCCA glyS 143447 - 141378 - | glycyl-tRNA synthetase, beta subunit glyQ 144380 - 143457 - | glycyl-tRNA synthetase subunit alpha TERM 164 144910 - 144886 - g 72 -2.6 -4.77036 | overlap 144887 144888 GTCGATCATCAAAAA TGCCCGCGCC TATCT GGCGCTGGGG GCTGAAGGCGTCGAC AHA_0129 144590 - 145171 + | DNA-3-methyladenine glycosylase I TERM 165 145212 - 145195 - T 90 -12.7 -3.84017 | opp_overlap 145195 CAAGGTCAAAGAGAA GGGAGGC TGAT GCCTCCC TTTTGCATATCGGCA TERM 166 145195 - 145212 + T 100 -12.7 -4.2349 | opp_overlap 145195 CAAGGTCAAAGAGAA GGGAGGC TGAT GCCTCCC TTTTGCATATCGGCA AHA_0130 147284 - 145248 - | methyl-accepting chemotaxis protein TERM 167 147655 - 147684 + G 81 -15.7 -3.06696 | gap 1 GGGGCGCGCTGGCTG GCGCGGCCACTGGC GCC GCC-GTGGGCGCGC TCTCTTCCAGCAAGG AHA_0131 147537 - 148193 + | putative outer membrane lipoprotein TERM 168 148219 - 148244 + T 100 -16.1 -4.71828 | opp_overlap 148220, overlap 148220 TCGCAGACATGAAAA AGGCCCCGCCA GCGA TGGCGGGGCCC TTTTATTGGTGCCGT TERM 169 148243 - 148220 - T 100 -19.6 -4.84527 | opp_overlap 148220 148219 CGCAGACATGAAAAA GGCCCCGCCA GCGA TGGCGGGGCC CTTTTATTGGTGCCG TERM 170 148220 - 148243 + T 100 -19.6 -3.42374 | opp_overlap 148220, overlap 148219 CGCAGACATGAAAAA GGCCCCGCCA GCGA TGGCGGGGCC CTTTTATTGGTGCCG TERM 171 148252 - 148275 + T 85 -11 -3.9461 | CGGGGCCCTTTTATT GGTGCCGTTG CGAG CAATGGCGCC TTGTTCTTGGACCCC AHA_0132 148808 - 148461 - | endoribonuclease L-PSP AHA_0133 149078 - 148830 - | hypothetical protein TERM 172 149231 - 149217 - H 77 -3.6 -5.1244 | TGAGTAATATAAAAA TTGAAC CAT ATTCAA CAAGGAGGTGTGAAT AHA_0134 149247 - 149438 + | hypothetical protein TERM 173 149456 - 149488 + T 100 -20.8 -3.85698 | opp_overlap 149456 149463, overlap 149463 CCAATACTTTCACAA CGACAAAGGCGGAT ATCTC ATCCGCCTTTGTCG TTTCTGGCCGCAGCA TERM 174 149488 - 149456 - T 100 -21.5 -3.33315 | opp_overlap 149456 149463, overlap 149463 CCAATACTTTCACAA CGACAAAGGCGGATA TCT CATCCGCCTTTGTCG TTTCTGGCCGCAGCA TERM 175 149463 - 149481 + T 86 -10.3 -4.17701 | opp_overlap 149463 149456, overlap 149456 TTTCACAACGACAAA GGCGGAT ATCTC ATCCGCC TTTGTCGTTTCTGGC TERM 176 149481 - 149463 - T 88 -11 -4.1021 | opp_overlap 149456 149463, overlap 149456 TTTCACAACGACAAA GGCGGATA TCT CATCCGCC TTTGTCGTTTCTGGC AHA_0135 150749 - 149511 - | ABC-type sugar transport system, periplasmic component TERM 177 149699 - 149689 - G 71 -5.4 -4.46212 | TCCGCCAGCAGAAAA TCCT GAT AGGA GCGGATGGCGCAGCG TERM 178 150093 - 150078 - G 70 -10.4 -3.54424 | GCGCAGCTGCTGAAA GCGGGT CAGC ACCCGC ACCATGTCGGGGCCG AHA_0136 152169 - 150754 - | signal transduction histidine kinase AHA_0137 152985 - 152251 - | GltR TERM 179 152608 - 152626 + g 70 -11.6 -3.14564 | CGGCTGGCGGAATTC GGCGCGGC GCA GCAGCGCC TTGATGCGGGCCTGC TERM 180 152929 - 152955 + g 70 -8 -4.04927 | overlap 152952 GAGCAGCTCGCGGAT CTCTTGGTCGTC GTC GACGATCAGCAG TTGTTTGCTCGTTGA TERM 181 153123 - 153102 - R 100 -15.1 -5.63517 | CGTGCAAATAAAAAA GGCCGACCC AAAC GGGCCGGCC AATACGCAGATTCCG fadA 154461 - 153298 - | 3-ketoacyl-CoA thiolase fadB 156630 - 154483 - | multifunctional fatty acid oxidation complex subunit alpha TERM 182 156816 - 156793 - R 100 -14 -4.5774 | opp_overlap 156797, overlap 156797 GATTAACAACCAAAA TAAAGGCGTC TGAT GACGCCTTTA TTAACCTTGTGTGGC TERM 183 156812 - 156797 - R 100 -10.4 -4.81843 | opp_overlap 156797, overlap 156793 AACAACCAAAATAAA GGCGTC TGAT GACGCC TTTATTAACCTTGTG TERM 184 156797 - 156812 + r 86 -10.4 -4.21989 | opp_overlap 156797 156793 AACAACCAAAATAAA GGCGTC TGAT GACGCC TTTATTAACCTTGTG AHA_0140 158770 - 156833 - | acetoacetyl-CoA synthetase TERM 185 159205 - 159220 + G 74 -5.4 -4.56775 | opp_overlap 159191 AGCCGGTGTTGCTGT TCTACC GGCC GGTGGA TTTTTGGCACAAGGT pepQ 158961 - 160283 + | proline dipeptidase TERM 186 160446 - 160415 - g 76 -6.6 -4.52857 | gap 1, opp_overlap 160429 ATCGGCGATATAAAA CAGCAAC-ATCCCGG GGC CCGGCATCACTGCTG GGCCTTTGTCGCCGG TERM 187 160429 - 160450 + G 86 -13.7 -3.86897 | opp_overlap 160415 ACAGCAACATCCCGG GGCCCGGCA TCAC TGCTGGGCC TTTGTCGCCGGTGCC AHA_0142 160283 - 160900 + | hypothetical protein trkH 160937 - 162394 + | Trk system potassium uptake protein TrkH AHA_0144 162333 - 162926 + | protoporphyrinogen oxidase TERM 188 162952 - 162969 + T 80 -4.7 -5.10461 | TCCTGAATGGCCTGA GCGCTGC GGTT GCGGGGC TTTTTGTTGGATAAA TERM 189 163153 - 163140 - T 75 -3.8 -4.86731 | opp_overlap 163140, overlap 163141 GGCGCCGAAAGAAAA GCGA AAACAA TCGC TTGACTTTCGAAGTG TERM 190 163320 - 163306 - T 71 -8.6 -3.80114 | GATGAAGTGACCAAA GCAACT TTT AGTTGC AGCAGTTAATTCAGC TERM 191 165248 - 165211 - T 77 -11.5 -3.61398 | opp_overlap 165216, overlap 165214 TCTTCTTGCTAACAA GAATGCAGAGTTAAGAA CTGA TTCTTAACTCTGTTTTC TTCAGCCTTGTGCTG TERM 192 165245 - 165214 - T 71 -7.4 -3.9461 | opp_overlap 165216, overlap 165211 TCTTGCTAACAAGAA TGCAGAGTTAAGAA CTGA TTCTTAACTCTGTT TTCTTCAGCCTTGTG TERM 193 165216 - 165243 + T 100 -14.4 -4.65747 | opp_overlap 165214 165211 TTGCTAACAAGAATG CAGAGTTAAGAA CTGA TTCTTAACTCTG TTTTCTTCAGCCTTG TERM 194 165371 - 165357 - T 74 -7.2 -4.07687 | opp_overlap 165347 165351 165357 ACTTCTTGGCGAAAA CCAAAT TTT ATTTGG TCCTTGTTGTACAGC TERM 195 165915 - 165903 - T 84 -9.1 -4.2354 | GAAAGGCGAAAAGAA CCCCT GTG AGGGG AGTGAAATAGAACCT TERM 196 168582 - 168563 - T 100 -15 -4.46675 | opp_overlap 168563 ACCCAATACAAGAAA CCCCGCTC AGAT GAGCGGGG TTTTTTATTATCTAA TERM 197 168563 - 168582 + T 100 -15 -5.60689 | opp_overlap 168563 ACCCAATACAAGAAA CCCCGCTC AGAT GAGCGGGG TTTTTTATTATCTAA TERM 198 168600 - 168627 + T 100 -14.4 -4.19123 | opp_overlap 168600, overlap 168623 TTTTATTATCTAAAA TCAGCGATTTAT GGTC ATAAATCGCTGA TTTCTCTGCTTTATG TERM 199 168627 - 168600 - T 100 -14.4 -4.21194 | opp_overlap 168600 168623 TTTTATTATCTAAAA TCAGCGATTTAT GGTC ATAAATCGCTGA TTTCTCTGCTTTATG AHA_0149 171214 - 168638 - | acyl-CoA synthetase AHA_0150 171478 - 171287 - | hypothetical protein AHA_0152 171648 - 172520 + | hypothetical protein ilvY 173402 - 172509 - | DNA-binding transcriptional regulator IlvY ilvC 173624 - 175105 + | ketol-acid reductoisomerase TERM 200 175227 - 175207 - T 100 -18.3 -5.24129 | opp_overlap 175207 CCCGGCCACAAAAAA GCCCCGCTC ATC GAGCGGGGC TTTTGCATTCAGAAA TERM 201 175207 - 175227 + T 100 -18.3 -4.27316 | opp_overlap 175207 CCCGGCCACAAAAAA GCCCCGCTC ATC GAGCGGGGC TTTTGCATTCAGAAA pgi 176903 - 175254 - | glucose-6-phosphate isomerase AHA_0155 177320 - 177508 + | phage lysis protein Y, holin, putative TERM 202 177559 - 177538 - T 83 -7.2 -4.65933 | opp_overlap 177539, overlap 177539 CATGCTGAAAACAAA GTCCGGCC CAGGGT GGCCGGAT TTTTTATGCCCGTCA TERM 203 177558 - 177539 - T 73 -10.7 -3.38836 | opp_overlap 177539, overlap 177538 ATGCTGAAAACAAAG TCCGGCC CAGGGT GGCCGGA TTTTTTATGCCCGTC TERM 204 177539 - 177558 + T 100 -10.7 -5.252 | opp_overlap 177539 177538 ATGCTGAAAACAAAG TCCGGCC CAGGGT GGCCGGA TTTTTTATGCCCGTC TERM 205 177618 - 177588 - T 95 -14.9 -3.53224 | gap 1, opp_overlap 177591 177594, overlap 177591 177594 CAGCGGGGTCGGAAA CGACAATGCCAGCC CGGA GGCTGGCATTGT-G TCATTCAGGAAAAGG TERM 206 177591 - 177616 + T 95 -17.7 -2.90075 | opp_overlap 177588 177591 177594, overlap 177594 CGGGGTCGGAAACGA CAATGCCAGCC CGGA GGCTGGCATTG TGTCATTCAGGAAAA TERM 207 177616 - 177591 - T 95 -17.7 -2.90496 | opp_overlap 177591 177594, overlap 177588 177594 CGGGGTCGGAAACGA CAATGCCAGCC CGGA GGCTGGCATTG TGTCATTCAGGAAAA TERM 208 177594 - 177613 + T 89 -13.6 -3.59946 | opp_overlap 177591 177588 177594, overlap 177591 GGTCGGAAACGACAA TGCCAGCC CGGA GGCTGGCA TTGTGTCATTCAGGA TERM 209 177613 - 177594 - T 89 -13.6 -3.60151 | opp_overlap 177594 177591, overlap 177591 177588 GGTCGGAAACGACAA TGCCAGCC CGGA GGCTGGCA TTGTGTCATTCAGGA AHA_0156 178471 - 177635 - | small-conductance mechanosensitive channel TERM 210 178603 - 178580 - R 100 -8.8 -5.24129 | opp_overlap 178581 178583, overlap 178583 TTGTGCCACAAAAAA CAAGGGAGGC CAAG GCCTCCCTCT TTACTGCAACCCGTC TERM 211 178581 - 178602 + r 74 -10.1 -3.72695 | opp_overlap 178580 178583, overlap 178583 TGTGCCACAAAAAAC AAGGGAGGC CAAG GCCTCCCTC TTTACTGCAACCCGT TERM 212 178583 - 178600 + r 84 -12.7 -3.44848 | opp_overlap 178583 178580, overlap 178581 TGCCACAAAAAACAA GGGAGGC CAAG GCCTCCC TCTTTACTGCAACCC TERM 213 178600 - 178583 - R 100 -12.7 -4.72201 | opp_overlap 178581 178583, overlap 178580 TGCCACAAAAAACAA GGGAGGC CAAG GCCTCCC TCTTTACTGCAACCC slmA 179254 - 178658 - | nucleoid occlusion protein AHA_0158 179782 - 179324 - | deoxyuridine 5'-triphosphate nucleotidohydrolase TERM 214 179767 - 179788 + g 72 -2.3 -4.7373 | overlap 179770 CCAGAATCTTCAGTT CAATTTGTG TTGT CATAAATCG TTTTTAATGGAGTGG coaBC 181025 - 179823 - | phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase TERM 215 181116 - 181129 + H 79 -3.1 -5.28755 | gap 1, overlap 181126 ATGGGGGACTTGTGG TCG-GG CTC CCGCGA TTTTTTGCTATGTTT radC 181173 - 181847 + | DNA repair protein RadC rpmB 181984 - 182220 + | ribosomal protein L28 TERM 216 182355 - 182332 - g 78 -3.2 -5.02074 | gap 1, opp_overlap 182332 182334, overlap 182333 182334 182336 CCATGCCCGAAAAAA TGGAGATCAAA AAG TTTGATC-CCG TTGTTCGTCAGCATG rpmG 182232 - 182399 + | 50S ribosomal protein L33 TERM 217 182418 - 182381 - f 73 -10.7 -3.36327 | overlap 182392 GCATGTGATCTACAA GGAAGGCAAAATCAAGT AATT ACTTGATGCTGCATTCC CAAAAACCCGGCCTA TERM 218 182407 - 182392 - f 71 -6.2 -4.32804 | overlap 182381 ACAAGGAAGGCAAAA TCAAGT AATT ACTTGA TGCTGCATTCCCAAA TERM 219 182441 - 182425 - f 95 -10.8 -4.59773 | opp_overlap 182425 CTGCATTCCCAAAAA CCCGGC CTAGT GCCGGG TTTTTTTATGGCCGA TERM 220 182425 - 182441 + F 100 -10.8 -5.60993 | opp_overlap 182425 CTGCATTCCCAAAAA CCCGGC CTAGT GCCGGG TTTTTTTATGGCCGA AHA_0163 182493 - 182948 + | hypothetical protein TERM 221 183695 - 183711 + G 72 -7.2 -4.18018 | overlap 183692 CTGCAGGTGTACGGG CGGGGC GGCCA GCCCTG TTTTCACTGCCACAC mutM 182978 - 183790 + | formamidopyrimidine-DNA glycosylase TERM 222 184654 - 184641 - g 86 -8.1 -4.58786 | opp_overlap 184642 184643, overlap 184643 AGCAAGAAGAAGAAA GCCTG CCTG CAGGC GGATTATGACGAGCT AHA_0165 183969 - 184850 + | hypothetical protein TERM 223 184867 - 184903 + T 95 -15.4 -3.46202 | gap 1, opp_overlap 184874, overlap 184874 GTGCACAGGCCCCTG CAGC-AAACAGGCTACC CTCG GGTAGCCTGTTTCGTTG TTACTTGGTCTGTTT TERM 224 184895 - 184874 - T 95 -14.5 -3.72576 | opp_overlap 184867 184874 GGCCCCTGCAGCAAA CAGGCTACC CTCG GGTAGCCTG TTTCGTTGTTACTTG TERM 225 184874 - 184895 + T 100 -14.5 -4.11412 | opp_overlap 184874, overlap 184867 GGCCCCTGCAGCAAA CAGGCTACC CTCG GGTAGCCTG TTTCGTTGTTACTTG coaD 185386 - 184904 - | phosphopantetheine adenylyltransferase TERM 226 185449 - 185486 + H 95 -14.1 -3.57263 | overlap 185451 185451 TTGGGGGATTGGCGC GACCGCCTTGGGGCG AGTTTTGG CGCCCCAAGGCCGGC TTTGCCGATCCAAAT TERM 227 185451 - 185485 + H 83 -15.1 -2.74144 | gap 1, overlap 185451 185449 GGGGGATTGGCGCGA CC-GCCTTGGGGCG AGTTTTGG CGCCCCAAGGCCGG CTTTGCCGATCCAAA TERM 228 185827 - 185811 - g 79 -13.7 -3.43218 | opp_overlap 185822, overlap 185805 GACAAGGAACAGCAA CGCGCCT TGC AGGCGCG CATCAAGGCCGCCGC TERM 229 186607 - 186632 + G 74 -12.5 -3.29511 | gap 1, opp_overlap 186601 186598 CCAAGACCATGGCGG CGGCGATCGCCC GCT GGGCGC-CGCCG TTCTGGCGCACTGAA AHA_0167 185610 - 186653 + | heptosyltransferase TERM 230 186703 - 186670 - T 95 -14.7 -3.70417 | gap 1, opp_overlap 186674 186676 186678, overlap 186671 186674 ACCAGATGATGTAAA TGC-AGACAGGGCCCT TGA AGGGCCCTGTCTCGTA TGAGGGGAAGTGCTG TERM 231 186700 - 186671 - T 91 -17.3 -2.81768 | gap 1, opp_overlap 186674 186676 186678, overlap 186670 186674 CCAGATGATGTAAAT GCAGACAGGGCCCT TGA AGGGCCCTGTCT-C GTATGAGGGGAAGTG TERM 232 186674 - 186698 + T 100 -20.1 -2.62184 | opp_overlap 186671 186670 186674, overlap 186676 186678 GATGATGTAAATGCA GACAGGGCCCT TGA AGGGCCCTGTC TCGTATGAGGGGAAG TERM 233 186698 - 186674 - T 100 -20.1 -2.66748 | opp_overlap 186674 186676 186678, overlap 186671 186670 GATGATGTAAATGCA GACAGGGCCCT TGA AGGGCCCTGTC TCGTATGAGGGGAAG TERM 234 186676 - 186696 + T 90 -16.9 -2.85351 | opp_overlap 186674 186671 186670, overlap 186674 186678 TGATGTAAATGCAGA CAGGGCCCT TGA AGGGCCCTG TCTCGTATGAGGGGA TERM 235 186678 - 186694 + T 81 -13.7 -2.97747 | opp_overlap 186674 186671 186670, overlap 186676 186674 ATGTAAATGCAGACA GGGCCCT TGA AGGGCCC TGTCTCGTATGAGGG AHA_0168 187511 - 186723 - | glycosyl transferase, group 2 family protein rfaF 187753 - 188868 + | lipopolysaccharide heptosyltransferase II waaA 188870 - 190135 + | 3-deoxy-D-manno-octulosonic-acid transferase TERM 236 190179 - 190161 - T 100 -16 -5.72616 | opp_overlap 190161 ACGGATATAAAAAAA CGGAGCGC ATG GCGCTCCG TTTTTTTATGTCGTG TERM 237 190161 - 190179 + T 100 -16 -5.74122 | opp_overlap 190161 ACGGATATAAAAAAA CGGAGCGC ATG GCGCTCCG TTTTTTTATGTCGTG ulaA 191462 - 190206 - | ascorbate-specific PTS system enzyme IIC AHA_0172 191846 - 191523 - | PTS sysytem, mannitol-specific enzyme II, B component AHA_0173 192286 - 191843 - | ascorbate-specific phosphotransferase enzyme IIA component TERM 238 191883 - 191905 + g 72 -13.4 -2.69348 | overlap 191882 191879 ATGTCGTCTTTGCTG GTGGCCGCCA TGA TGGCCGCCAC GTCTTCTTCATTCAT TERM 239 192387 - 192363 - H 89 -13.7 -3.57263 | opp_overlap 192357 192375 192376, overlap 192378 192380 AGCCTGATCGCGAAA GTTAGCGCTAC CAG ATAGCGCTAAC ATCGATCTGTGATAG TERM 240 192375 - 192410 + H 75 -6.9 -4.41348 | opp_overlap 192363 192378 192380, overlap 192357 192376 AAAGTTAGCGCTACC AGATAGCGCTAACAT CGATCT GTGATAGCGCTATCA TTTCTTTCACGGAAG TERM 241 192376 - 192409 + H 71 -10.4 -3.24488 | opp_overlap 192363 192378 192380, overlap 192357 192375 AAGTTAGCGCTACCA GATAGCGCTAACAT CGATCT GTGATAGCGCTATC ATTTCTTTCACGGAA AHA_0174 192539 - 193561 + | HTH-type transcriptional regulator GntR TERM 242 194059 - 194088 + G 70 -12.1 -3.14344 | gap 1, overlap 194024 194050 CTGGTGACCGGCGCC GCCGGCGG-GGTGG GTT CCACCGCCGTCGCC TTGCTGGCCGCGCTG TERM 243 194428 - 194465 + G 84 -8.3 -4.41348 | gap 1, overlap 194439 CTGGCGCGCCGCCAA CTGGCGTGGCAGCGACTG GCG CGGGATCTGCC-CGCCAG TTTCTTTGCGCAGGC AHA_0175 193591 - 194571 + | quinone oxidoreductase YhdH/YhfP family AHA_0176 194616 - 194765 + | hypothetical protein TERM 244 194808 - 194786 - f 100 -20.6 -3.10344 | opp_overlap 194786, overlap 194770 194769 194788 CGCGTATTGAATACA CAGGCGGGCC TCG GGCCCGCCTG TTTTTTTGGGCGGCT TERM 245 194786 - 194808 + F 100 -20.6 -5.40474 | opp_overlap 194770 194769 194786 194788 CGCGTATTGAATACA CAGGCGGGCC TCG GGCCCGCCTG TTTTTTTGGGCGGCT TERM 246 194806 - 194788 - f 100 -17.4 -3.11072 | opp_overlap 194786, overlap 194769 194786 CGTATTGAATACACA GGCGGGCC TCG GGCCCGCC TGTTTTTTTGGGCGG AHA_0177 194898 - 195239 + | hypothetical protein AHA_0178 195471 - 195253 - | hypothetical protein TERM 247 195517 - 195480 - R 100 -16.4 -4.11216 | gap 1, opp_overlap 195471 195470, overlap 195483 TTTTCATTTCTAAAA CAGCGAGCGGGCCAGGA TGATC TCGTGGCCCGCTCG-TG GTGACGGGAGATTAC TERM 248 195515 - 195483 - R 100 -19.2 -2.79004 | opp_overlap 195471 195470, overlap 195480 TCATTTCTAAAACAG CGAGCGGGCCAGGA TGATC TCGTGGCCCGCTCG TGGTGACGGGAGATT fliL-1 195963 - 195529 - | flagellar basal body-associated protein FliL AHA_0180 196109 - 196645 + | chorismate--pyruvate lyase ubiA 196642 - 197505 + | 4-hydroxybenzoate octaprenyltransferase TERM 249 197514 - 197555 + T 100 -19.1 -3.48395 | gap 1, opp_overlap 197527, overlap 197527 TCTGTGAGTCAGCCC CATCATGAAAAAAGGCCGCA TGT TGCGGCCTTTTTT-ATGGTG TTGTGTGAGCGGGGT TERM 250 197527 - 197543 + T 100 -13.7 -5.36965 | opp_overlap 197527, overlap 197514 CCCATCATGAAAAAA GGCCGCA TGT TGCGGCC TTTTTTATGGTGTTG TERM 251 197543 - 197527 - T 100 -13.7 -5.1861 | opp_overlap 197514 197527 CCCATCATGAAAAAA GGCCGCA TGT TGCGGCC TTTTTTATGGTGTTG plsB 199993 - 197570 - | glycerol-3-phosphate acyltransferase TERM 252 198079 - 198103 + g 75 -13.5 -3.05384 | opp_overlap 198066 198076 AACGGGCAACGATCT CGCTGCGGGAG ATC CCCTCGCAGCG TTCGATCAGGGCCGC lexA 200198 - 200821 + | LexA repressor TERM 253 200831 - 200860 + F 100 -18.7 -4.11838 | opp_overlap 200836, overlap 200832 200836 ATGTAATCCCTGCCA TGAAACGGCCTCC TGCG GGAGGCCGTTTCG TTTCTGTACTCCTTT TERM 254 200832 - 200859 + F 100 -20 -3.06018 | opp_overlap 200836, overlap 200831 200836 TGTAATCCCTGCCAT GAAACGGCCTCC TGCG GGAGGCCGTTTC GTTTCTGTACTCCTT TERM 255 200836 - 200855 + F 100 -15 -4.18644 | opp_overlap 200836, overlap 200832 200831 ATCCCTGCCATGAAA CGGCCTCC TGCG GGAGGCCG TTTCGTTTCTGTACT TERM 256 200855 - 200836 - f 95 -15 -3.72695 | opp_overlap 200836 200832 200831 ATCCCTGCCATGAAA CGGCCTCC TGCG GGAGGCCG TTTCGTTTCTGTACT TERM 257 201108 - 201061 - f 72 -3.5 -4.68593 | gap 3, overlap 201066 GGCAGCAGGGAAAAA CAACAGCCTC-GTG-C-GGTGTGC AGC GCACACCTGGCAAAGAGGCGCTTG CGGGATAGAAGGGAG AHA_0184 201261 - 201548 + | hypothetical protein TERM 258 201567 - 201590 + T 100 -18.2 -4.17316 | TCACTGCTTCTTGTG CAGCCCCACC TTAT GGTGGGGCTG TTGTTTTGGGCGGGT AHA_0185 201671 - 201552 - | hypothetical protein TERM 259 201608 - 201626 + g 73 -13.1 -3.14146 | GTTTTGGGCGGGTTC GGGCCGG CATCA CCGGCCC TTGCGTCATCTTCTG AHA_0186 201710 - 202396 + | SCO1/SenC family protein TERM 260 202449 - 202464 + G 72 -11.8 -3.38046 | overlap 202447 TGGTGGCGGGACGGG CGGCGC CACC GCGCCG TGTTTGCCCTGGCCC TERM 261 203675 - 203690 + G 70 -11.8 -3.14132 | TGTGGCGGCCTTGTG GGCCGC GATG GCGGCC TTGATGGCGGGGCGG AHA_0187 202386 - 203804 + | DNA-damage-inducible protein F AHA_0188 204339 - 203833 - | RNA methyltransferase TERM 262 204350 - 204328 - G 78 -10.5 -4.08767 | overlap 204341 CTGATGGGGCGAAAA GGGCGCCAG CATAC CCAGCGCCC GTGCGGATGAAAAGA cpxA 205727 - 204372 - | sensor histidine kinase CpxA cpxR 206419 - 205724 - | transcriptional regulatory protein CpxR fieF 206506 - 207417 + | cation-efflux pump FieF cysE 207426 - 208205 + | serine acetyltransferase TERM 263 208373 - 208416 + G 81 -16.7 -2.8214 | gap 1, overlap 208371 208370 GCTGGTGGGCGCGGC GCGGCGCCAGGCGCTGGCCC TGTAC GGGGCAGCGC-TGGCACTGC TGATCTTCTCCTGCT AHA_0193 208227 - 209507 + | hypothetical protein AHA_0194 209553 - 209951 + | transcriptional regulator TERM 264 209979 - 210001 + T 100 -20.6 -4.46112 | opp_overlap 209979 CGCGAGAATTGAAAA CGGGCCGCTC CAT GAGCGGCCCG TTTGTTTGGGTACGG TERM 265 210001 - 209979 - T 100 -20.6 -4.3208 | opp_overlap 209979 CGCGAGAATTGAAAA CGGGCCGCTC CAT GAGCGGCCCG TTTGTTTGGGTACGG AHA_0195 210675 - 210025 - | isoprenoid biosynthesis protein TERM 266 212857 - 212842 - g 73 -3.2 -4.77036 | gap 1, opp_overlap 212856 GCCGATCATCAAAAA GAC-CCC CAA GGGCGCC CCATCCACTGCGGAA polA 211076 - 213829 + | DNA polymerase I TERM 267 213860 - 213891 + T 100 -13.8 -3.96148 | gap 1, opp_overlap 213862 213864, overlap 213863 213864 ATGTAGCTATATAAG AAGAGAAGCCCGGCA TGA TGCCGGGCTTC-CTG TTTGTGGTGGCGGGG TERM 268 213889 - 213862 - T 100 -16.4 -3.8969 | gap 1, opp_overlap 213860 213863 213864, overlap 213864 GTAGCTATATAAGAA GAGAAGCCCGGCA TGA TGCCGGGCTTC-C TGTTTGTGGTGGCGG TERM 269 213863 - 213889 + T 100 -16.6 -3.57406 | opp_overlap 213862 213864, overlap 213860 213864 TAGCTATATAAGAAG AGAAGCCCGGCA TGA TGCCGGGCTTCC TGTTTGTGGTGGCGG TERM 270 213864 - 213888 + T 100 -20.1 -2.74122 | opp_overlap 213862 213864, overlap 213863 213860 AGCTATATAAGAAGA GAAGCCCGGCA TGA TGCCGGGCTTC CTGTTTGTGGTGGCG TERM 271 213888 - 213864 - T 100 -20.1 -3.53276 | opp_overlap 213864 213863 213860, overlap 213862 AGCTATATAAGAAGA GAAGCCCGGCA TGA TGCCGGGCTTC CTGTTTGTGGTGGCG AHA_0197 214448 - 213909 - | carbonic anhydrase TERM 272 214070 - 214032 - G 83 -7.2 -4.62441 | opp_overlap 214033, overlap 214028 214034 GCCCATATAAAGAAA GCCGGCCTCGAGCCGC TTGCCTG GCGGCACCAGGCTGCC CGCCCCGATCATCAC TERM 273 214400 - 214415 + g 72 -3.9 -4.61873 | overlap 214401 CCACATATACCCGTT TGCCC AACTGC GGGCG TTTTCCTTTGTAAGG TERM 274 214796 - 214812 + H 74 -6.7 -4.26589 | opp_overlap 214789, overlap 214809 TCACAGCATCGAGCA TCAAAAA CAA TTTTTGA TTTTCAATGTCTGAT TERM 275 216867 - 216853 - H 74 -7.2 -4.07687 | opp_overlap 216843 216853 216847 ACTTCTTGGCGAAAA CCAAAT TTT ATTTGG TCCTTGTTGTACGAC TERM 276 216915 - 216885 - H 73 -10.4 -3.40403 | opp_overlap 216891, overlap 216888 CTTGTTGTACGACAA CAAGCTGCGTCGGT TTC ACCGACACTTCTTG GGGTTGTATGGTTAA TERM 277 216891 - 216909 + H 70 -8.8 -3.70081 | opp_overlap 216888 216885 GTACGACAACAAGCT GCGTCGGT TTC ACCGACAC TTCTTGGGGTTGTAT TERM 278 217413 - 217401 - H 84 -9.1 -4.2354 | GAAAGGCGAAAAGAA CCCCT GTG AGGGG AGTGAAATAGAACCT TERM 279 220265 - 220244 - H 73 -8.7 -3.84961 | TATTGAAGTAGTAAA GCTTTTGCC TGAC GGCAATAGC GCCGTGGAACCACCT TERM 280 220401 - 220378 - H 80 -12.4 -3.36878 | opp_overlap 220380, overlap 220380 GGCACCTATTTAGAA GAGGCCTCCC ATTC GGGAGGCCTT TTTGCATTGGAATTT TERM 281 220399 - 220380 - H 95 -15 -3.254 | opp_overlap 220380, overlap 220378 CACCTATTTAGAAGA GGCCTCCC ATTC GGGAGGCC TTTTTGCATTGGAAT TERM 282 220380 - 220399 + H 100 -15 -4.74504 | opp_overlap 220380 220378 CACCTATTTAGAAGA GGCCTCCC ATTC GGGAGGCC TTTTTGCATTGGAAT TERM 283 220463 - 220448 - H 74 -4.7 -4.72272 | TTCTTTTAGTAAAAA TGCTG GGATGT CAGCA CGTTGCCCGTTACTC AHA_0204 220520 - 221485 + | DNA-binding transcriptional repressor EbgR TERM 284 224159 - 224122 - g 70 -10.5 -3.57039 | gap 1, overlap 224116 224155 GATCGACAACCACAA GCAGG-AGTACGAGAGCC TGT GGCACCCGAACCACCTGC AGATCATGCAGGAGC ebgA 221807 - 224881 + | cryptic beta-D-galactosidase subunit alpha AHA_0206 224878 - 225333 + | evolved beta-D-galactosidase, beta subunit; cryptic gene AHA_0207 225436 - 226881 + | inner membrane transporter YgjI TERM 285 226928 - 226906 - f 73 -9 -3.91084 | overlap 226907 TGACTCCCAATCAAA CCGGGTGGTC GTT GGCCACCCGC AAACCGTTGAACCAG TERM 286 226927 - 226907 - f 79 -12.5 -2.94329 | overlap 226906 GACTCCCAATCAAAC CGGGTGGTC GTT GGCCACCCG CAAACCGTTGAACCA AHA_0208 226910 - 227296 + | hypothetical protein TERM 287 227674 - 227663 - g 77 -2.2 -5.06414 | gap 1, overlap 227664 CTCGGCCAACAAAAA CTCCG AGT CGG-G CATGTACGACTGGCT TERM 288 227716 - 227696 - g 72 -4.5 -4.57569 | opp_overlap 227695 227706 CGACTGGCTGAAAAA GCCGCTCGG CAC CCGGATGGC CTATCTGGGCTCGTT AHA_0209 227463 - 228899 + | amino acid permease TERM 289 228931 - 228907 - f 71 -10 -3.52093 | opp_overlap 228904 228904 228925 AGAGTTGAAGCACAA GGCTGGCC GGATCCGGT GGCCAGCC GGGCTTGCTTAATTT TERM 290 229015 - 229043 + F 100 -20.5 -3.51778 | opp_overlap 229020, overlap 229018 GCTGGGGATTCGTTT CAACAGGAGCTGT GCC ACAGCTCCTGTTG TGTTTCCTGTCGTCC TERM 291 229018 - 229040 + F 100 -16.4 -3.88438 | opp_overlap 229020, overlap 229015 GGGGATTCGTTTCAA CAGGAGCTGT GCC ACAGCTCCTG TTGTGTTTCCTGTCG TERM 292 229038 - 229020 - f 84 -13.2 -3.02144 | opp_overlap 229018 229015 GGATTCGTTTCAACA GGAGCTGT GCC ACAGCTCC TGTTGTGTTTCCTGT TERM 293 229061 - 229089 + F 71 -11 -2.90496 | gap 1, overlap 229058 229063 TTTCCTGTCGTCCCC GATCACCGGCCCC GCGC GGGGACGG-GATC TGCTTTCACCGGAGA AHA_0210 229111 - 230082 + | sodium/bile acid symporter family protein TERM 294 230122 - 230100 - T 100 -19.2 -5.24129 | opp_overlap 230100 GGTCCGGATAAAAAA GAGGGAGGCC ATG GGCCTCCCTC TTTCGTTTGCTGCCT TERM 295 230100 - 230122 + T 100 -19.2 -4.10953 | opp_overlap 230100 GGTCCGGATAAAAAA GAGGGAGGCC ATG GGCCTCCCTC TTTCGTTTGCTGCCT AHA_0211 232290 - 230140 - | generic methyltransferase AHA_0212 232655 - 233377 + | hypothetical protein TERM 296 233406 - 233424 + T 100 -16 -3.6502 | opp_overlap 233406 CCGAGCAGAAAAAAA CAGGCCCG TTA CGGGCCTG TTTCGATCAGAGGTG TERM 297 233424 - 233406 - T 100 -16 -5.67063 | opp_overlap 233406 CCGAGCAGAAAAAAA CAGGCCCG TTA CGGGCCTG TTTCGATCAGAGGTG AHA_0213 234267 - 233431 - | esterase YeiG AHA_0214 235444 - 234317 - | alcohol dehydrogenase class III AHA_0215 235564 - 236469 + | LysR family transcriptional regulator TERM 298 236504 - 236487 - T 100 -14.1 -5.4505 | opp_overlap 236487 TCGCTCAATAAAAAA GGCCCGC ATGT GCGGGCC TTTTGCATGGCAAGG TERM 299 236487 - 236504 + T 100 -14.1 -4.18018 | opp_overlap 236487 TCGCTCAATAAAAAA GGCCCGC ATGT GCGGGCC TTTTGCATGGCAAGG AHA_0216 237491 - 236526 - | putative transport system permease ABC transporter protein AHA_0217 238609 - 237494 - | putative transport system permease ABC transporter protein AHA_0218 240272 - 238692 - | ABC transporter, nucleotide binding/ATPase protein (sugar/ribonucleotide) TERM 300 240327 - 240310 - R 100 -14.1 -4.91573 | opp_overlap 240307 240310 AAAAGAGACTAAAAA CCGGCCC GTGC GGGCCGG TCGTTGGGTTGAGAG TERM 301 240310 - 240327 + r 83 -14.1 -2.78712 | opp_overlap 240310, overlap 240307 AAAAGAGACTAAAAA CCGGCCC GTGC GGGCCGG TCGTTGGGTTGAGAG AHA_0219 241459 - 240356 - | membrane lipoprotein TERM 302 241483 - 241470 - H 74 -2.4 -5.05505 | opp_overlap 241470 ATCATAAAGGAAAAA CGTT TGCGTT AACG GTTTGAAATATAAGC TERM 303 243142 - 243165 + G 100 -10.2 -4.76075 | gap 1, opp_overlap 243131 243130 CAAGGTGCTGACCGG CCGCGC-CGGC AAC GCGGTGCGCGG TTTTGTTGATCTCAT uvrD 241787 - 243958 + | DNA helicase II AHA_0221 245614 - 244058 - | hypothetical protein TERM 304 244430 - 244407 - G 77 -2.4 -5.01732 | overlap 244410 AATTCCTCGAAAAAA TCATGATGGT CCAA ACCTTCACAA CTTTTTATTTTACGT TERM 305 245095 - 245080 - G 100 -4 -5.48787 | overlap 245081 AGAATATATAAAAAA CTAGGT TTTC ACCTAA TGAAAGAGCTTCGAA AHA_0222 246813 - 245611 - | hypothetical protein AHA_0223 247247 - 246810 - | putative lipoprotein AHA_0224 247422 - 247934 + | hypothetical protein AHA_0225 249187 - 248027 - | hypothetical protein TERM 306 249640 - 249612 - R 80 -8.8 -4.18303 | opp_overlap 249612 AGGAGAAATCAGAAA CCCGGCC-CTGACG GGG CG-CGGTGGCCGGG TGAATTGTAAAGAGT AHA_0226 249876 - 249679 - | hypothetical protein TERM 307 250223 - 250201 - g 70 -12 -3.16668 | CAAGATGCTGACCAA CCTCGACCAG TGC CTGGCCAAGG CCGAGGCCCACGCCG AHA_0227 250157 - 250657 + | hypothetical protein TERM 308 250690 - 250722 + T 80 -9.1 -4.11216 | opp_overlap 250695, overlap 250695 250697 GGCTTTGCCCAGCAT AAAAAGAGCCTGCCA CTG TGGCAGGCTCTGTCG TTTTCGGGGTCACCG TERM 309 250695 - 250717 + T 100 -17.8 -3.10091 | opp_overlap 250695, overlap 250690 250697 TGCCCAGCATAAAAA GAGCCTGCCA CTG TGGCAGGCTC TGTCGTTTTCGGGGT TERM 310 250717 - 250695 - T 100 -17.8 -4.91109 | opp_overlap 250695 250690 250697 TGCCCAGCATAAAAA GAGCCTGCCA CTG TGGCAGGCTC TGTCGTTTTCGGGGT TERM 311 250697 - 250715 + T 91 -14.6 -3.10533 | opp_overlap 250695, overlap 250695 250690 CCCAGCATAAAAAGA GCCTGCCA CTG TGGCAGGC TCTGTCGTTTTCGGG AHA_0228 251195 - 250746 - | hypothetical protein AHA_0229 251788 - 251276 - | hemolysin TERM 312 251848 - 251821 - R 100 -18.4 -3.3907 | overlap 251811 251822 TGAAAGGGGAAGCAA GCGGCCCCGTGC GGGC GCACGGGGCCGG AAGTGAGCGTCTTGC TERM 313 251847 - 251822 - R 100 -21.9 -2.6296 | overlap 251811 251821 GAAAGGGGAAGCAAG CGGCCCCGTGC GGGC GCACGGGGCCG GAAGTGAGCGTCTTG AHA_0230 252542 - 251886 - | hypothetical protein AHA_0231 252751 - 253488 + | hypothetical protein AHA_0232 254166 - 253498 - | LysR family transcriptional regulator TERM 314 253799 - 253771 - G 77 -12.5 -3.59979 | gap 1, overlap 253772 CTGTTCGAGTGGAAA GGCCTCGGCCAG GTTCGA CTGGCCGAG-CC AGGGGCTGAATCCCA AHA_0233 254382 - 254191 - | transcriptional regulatory protein AHA_0234 254484 - 255104 + | lysine exporter protein, putative TERM 315 255239 - 255259 + G 73 -11.1 -3.54459 | AACTGACATGGTCGA GGCGATGCC CAT GGCATGGCC TTTCAACAAGGTTGG TERM 316 255371 - 255396 + G 73 -8.9 -4.03413 | opp_overlap 255377, overlap 255374 CCGGATCCATGGTGC CGAACAGGCCG GCAG CGGCCTGGTGG TTTATATCCCGGGAT TERM 317 255420 - 255443 + G 70 -7.4 -4.07885 | CCGGGATTTGGCGGT GATCTGGGTG CCTA CAGCCAGGTC TTTTGCGAGAAGGTG AHA_0235 255180 - 256424 + | hypothetical protein TERM 318 256489 - 256467 - T 100 -19.2 -4.15044 | opp_overlap 256467 256470, overlap 256470 GTGCTTGCCAATAAA CAACGGGGGC TTG GCCCCCGTTG TTGTTATCGATGGCT TERM 319 256467 - 256489 + T 100 -19.2 -3.82378 | opp_overlap 256467 256470, overlap 256470 GTGCTTGCCAATAAA CAACGGGGGC TTG GCCCCCGTTG TTGTTATCGATGGCT TERM 320 256486 - 256470 - T 100 -15.1 -4.20367 | opp_overlap 256467 256470, overlap 256467 CTTGCCAATAAACAA CGGGGGC TTG GCCCCCG TTGTTGTTATCGATG TERM 321 256470 - 256486 + T 100 -15.1 -4.03888 | opp_overlap 256470 256467, overlap 256467 CTTGCCAATAAACAA CGGGGGC TTG GCCCCCG TTGTTGTTATCGATG AHA_0236 257545 - 256511 - | YeeE/YedE family protein TERM 322 257604 - 257573 - R 83 -13 -3.2794 | gap 1 GCCGAGCCAGAGTAA CGCTCCCC-CCGCGA TTG CCACGATGGGGAGCG ACCATTTTCGATTCA AHA_0237 259491 - 257746 - | methyl-accepting chemotaxis protein mgtA 260599 - 263367 + | magnesium-translocating P-type ATPase TERM 323 263442 - 263419 - T 100 -16.8 -3.827 | opp_overlap 263419 AATAATGAACGTAAA GAGGGATGGC CTGG GCCATCCCTC TTTTTTATGGCTGGC TERM 324 263419 - 263442 + T 100 -16.8 -5.28176 | opp_overlap 263419 AATAATGAACGTAAA GAGGGATGGC CTGG GCCATCCCTC TTTTTTATGGCTGGC AHA_0239 264210 - 263467 - | amino acid transporter LysE AHA_0240 265012 - 264194 - | AraC/XylS family transcriptional regulator rarD-1 265982 - 265080 - | RarD protein AHA_0242 266398 - 266108 - | hypothetical protein TERM 325 266377 - 266362 - G 100 -10.4 -5.18355 | GGCAAAAATGAAAAA GGGGGA TTTC TCCCCC CAATTCGCAGATAAG AHA_0243 267903 - 266407 - | putative aldehyde dehydrogenase TERM 326 268097 - 268058 - R 74 -10.7 -3.53091 | gap 1, opp_overlap 268076 ATCCGGCGGGGCAAA CCGCTCCG-CAAGCGCGG GCCGT CGGCGCCTGCCGAAGCAG AGGCCGGCGCGAAGG AHA_0244 268707 - 268165 - | DNA-binding protein TERM 327 268802 - 268817 + H 76 -3.2 -5.12707 | GGGTGATACCATATG GGGC AAGTTTGA GCCC TTTTTTAAGATTTCA AHA_0245 268893 - 270224 + | beta alanine--pyruvate transaminase mmsA-1 270323 - 271819 + | methylmalonate-semialdehyde dehydrogenase AHA_0247 271904 - 272659 + | glutamine amidotransferase, class I ald 272656 - 273771 + | alanine dehydrogenase TERM 328 273772 - 273825 + F 76 -12.9 -2.71712 | opp_overlap 273819, overlap 273771 TCGGTACTGGGCTGA CGCAGCCGTTGCGCGCCCGCTCGGC AAAC GTCGAGCGGGCTCACAAACCCCGCG ATTTCAGGGAGGGCC TERM 329 273832 - 273854 + F 78 -13.4 -2.66634 | opp_overlap 273819, overlap 273836 273853 AACCCCGCGATTTCA GGGAGGGCCG CCA CGGCCCTTTC TCATATACTGGGCTC TERM 330 273836 - 273850 + F 93 -12.8 -4.03078 | opp_overlap 273819, overlap 273832 CCGCGATTTCAGGGA GGGCCG CCA CGGCCC TTTCTCATATACTGG AHA_0249 273891 - 274730 + | carbohydrate kinase TERM 331 274734 - 274709 - f 75 -6.2 -4.57073 | overlap 274710 274711 CAGCGCCCTGAAAAA CTGGCTCAG-GC AGCC GCACTGAGCC-G CCATGAACTGTTGCC AHA_0250 275030 - 275482 + | Rrf2 family protein TERM 332 275527 - 275492 - T 100 -20.6 -3.10905 | opp_overlap 275498 275502, overlap 275495 275502 GCATAAGCCAGGCAA GCATGACAAAGGGGCC CACG GGCCCCTTTGTCATGT CCGGGATTCGGGCTC TERM 333 275524 - 275495 - T 100 -20.9 -2.76189 | opp_overlap 275498 275502, overlap 275492 275502 TAAGCCAGGCAAGCA TGACAAAGGGGCC CACG GGCCCCTTTGTCA TGTCCGGGATTCGGG TERM 334 275498 - 275521 + T 89 -16.8 -2.62933 | opp_overlap 275495 275492 275502, overlap 275502 GCCAGGCAAGCATGA CAAAGGGGCC CACG GGCCCCTTTG TCATGTCCGGGATTC TERM 335 275517 - 275502 - T 90 -11.8 -4.02022 | opp_overlap 275502 275498, overlap 275495 275492 GGCAAGCATGACAAA GGGGCC CACG GGCCCC TTTGTCATGTCCGGG TERM 336 275502 - 275517 + T 90 -11.8 -4.0162 | opp_overlap 275495 275492 275502, overlap 275498 GGCAAGCATGACAAA GGGGCC CACG GGCCCC TTTGTCATGTCCGGG AHA_0251 276053 - 275541 - | NapF protein TERM 337 276058 - 276046 - G 85 -3.4 -5.38047 | opp_overlap 276055 CAGCGACAGAAAAAA TGAG TCATG CTCA CCCCTGATACCTATT AHA_0252 276180 - 276407 + | hypothetical protein TERM 338 276602 - 276592 - g 73 -6.8 -4.29738 | overlap 276574 GCAGAGCCAGCAAAA GCTG GAG CAGC AGCAGACCCTGCTCA AHA_0253 276404 - 277744 + | DNA recombination protein RmuC TERM 339 277769 - 277801 + T 90 -10.5 -4.33755 | opp_overlap 277746 277773 277776, overlap 277773 277776 TCATTCGCTCAAGCA ACAAGAAGGGCAGCC ACT GGCTGCCCTTCTGCA TTTCTTCGTCTTGAT TERM 340 277797 - 277773 - T 100 -20.1 -3.81146 | opp_overlap 277769 277773 277776, overlap 277746 277776 TCGCTCAAGCAACAA GAAGGGCAGCC ACT GGCTGCCCTTC TGCATTTCTTCGTCT TERM 341 277773 - 277797 + T 100 -20.1 -2.77685 | opp_overlap 277746 277773 277776, overlap 277769 277776 TCGCTCAAGCAACAA GAAGGGCAGCC ACT GGCTGCCCTTC TGCATTTCTTCGTCT TERM 342 277794 - 277776 - T 100 -16 -4.0342 | opp_overlap 277773 277769 277776, overlap 277746 277773 CTCAAGCAACAAGAA GGGCAGCC ACT GGCTGCCC TTCTGCATTTCTTCG TERM 343 277776 - 277794 + T 100 -16 -3.52234 | opp_overlap 277746 277776 277773, overlap 277773 277769 CTCAAGCAACAAGAA GGGCAGCC ACT GGCTGCCC TTCTGCATTTCTTCG AHA_0254 279292 - 277850 - | TrkH TERM 344 279358 - 279323 - R 93 -11.2 -4.42386 | gap 1, opp_overlap 279323 279320 CGTTGATTGACAAAA GACCCGG-ACAATCCCT GGT AGAGGCTGTGCCGGGTC TGGGTTGTGCTGCCT trkA 280765 - 279389 - | potassium transporter peripheral membrane component TERM 345 280894 - 280873 - R 72 -11.5 -3.14344 | GATGTTGGGCAGTAA TGGGTGCCG CAAG CGGCACCCG TCGTGATGATGGCCC sun 282205 - 280913 - | ribosomal RNA small subunit methyltransferase B TERM 346 282222 - 282251 + r 85 -15.7 -2.57192 | overlap 282227 GTGTTACCTTAGATG CGCAAGTCGGGGC CTGG GCCCCGCCTTGTG TCAATTCAGTTCAAT TERM 347 282227 - 282246 + r 74 -10.6 -3.55368 | overlap 282222 ACCTTAGATGCGCAA GTCGGGGC CTGG GCCCCGCC TTGTGTCAATTCAGT fmt 283206 - 282262 - | methionyl-tRNA formyltransferase TERM 348 283165 - 283144 - G 86 -12.9 -3.9644 | GTCGGAAGACAACAA CGCCGCCAG GTGA CGGGCGGCG AAGTCGGGAGTACCG def-1 283731 - 283219 - | peptide deformylase AHA_0259 283840 - 284928 + | LysM domain-containing protein dprA 284930 - 286045 + | DNA protecting protein DprA AHA_0261 286038 - 286511 + | hypothetical protein AHA_0262 286567 - 287124 + | topoisomerase DNA-binding C4 zinc finger domain-containing protein purE-2 287199 - 287702 + | phosphoribosylaminoimidazole carboxylase, catalytic subunit TERM 349 287810 - 287830 + F 100 -11.1 -5.24531 | opp_overlap 287807, overlap 287811 GTTAATCAATGATGA GGCGACAGC CCG GCTGTCGCA TTTTTTATGCCCAAT TERM 350 287811 - 287829 + F 95 -14.6 -3.73995 | opp_overlap 287807, overlap 287810 TTAATCAATGATGAG GCGACAGC CCG GCTGTCGC ATTTTTTATGCCCAA AHA_0264 287837 - 288397 + | Sua5/YciO/YrdC family protein hemF 288492 - 289400 + | coproporphyrinogen III oxidase TERM 351 289406 - 289422 + F 100 -13.7 -3.94877 | opp_overlap 289406 GTGGTTGTGACCAGA GGGGCCA TGA TGGCCCC TTCTTATTGGCCGAT TERM 352 289422 - 289406 - f 79 -13.7 -2.78384 | opp_overlap 289406 GTGGTTGTGACCAGA GGGGCCA TGA TGGCCCC TTCTTATTGGCCGAT TERM 353 289432 - 289444 + F 70 -9.1 -3.73647 | GGCCCCTTCTTATTG GCCGA TAT TCGGC TTGTTCCTGAGTGCG aroE 289504 - 290325 + | shikimate 5-dehydrogenase AHA_0267 290322 - 290582 + | hypothetical protein TERM 354 290678 - 290699 + T 100 -10.9 -5.77988 | opp_overlap 290677 290678 AGTCACCTTTATAAC TCCCCGGTA TTCG TACTGGGGA TTTTTTTATCTATAT TERM 355 290879 - 290904 + T 100 -9.7 -5.66684 | opp_overlap 290877, overlap 290881 ATGTGGCTGAATAGC GACCCCGGTGA GTCA TCATCGGGGTG TTTTTTTATGGGTTG TERM 356 290881 - 290902 + T 95 -12.3 -4.46105 | opp_overlap 290877, overlap 290879 GTGGCTGAATAGCGA CCCCGGTGA GTCA TCATCGGGG TGTTTTTTTATGGGT TERM 357 291040 - 291073 + T 100 -15.3 -5.04325 | overlap 291043 TTTGAACTGATTGTT TAAGGCCGGTACTGC GTTT GCAGAACCGGCCTCA TTTTTATCCTTTCCA TERM 358 291043 - 291070 + T 100 -17 -3.36613 | overlap 291040 GAACTGATTGTTTAA GGCCGGTACTGC GTTT GCAGAACCGGCC TCATTTTTATCCTTT AHA_0268 292023 - 291373 - | GTP-binding protein YihA AHA_0269 292127 - 292783 + | cytochrome c4 TERM 359 292817 - 292837 + F 100 -16.9 -4.88293 | TCTCATTGATATTGA CGAGGAGCC GCC GGCTCCTCG TTTCTTTTTGGCCTT TERM 360 293386 - 293371 - f 73 -10.4 -3.44444 | opp_overlap 293371, overlap 293365 GCATAAACATATCAA GGCAGC TTCG GCTGCC TTTTTTCTTTTGGGT TERM 361 293371 - 293386 + F 100 -10.4 -5.80951 | opp_overlap 293371 293365 GCATAAACATATCAA GGCAGC TTCG GCTGCC TTTTTTCTTTTGGGT AHA_0270 293413 - 294189 + | hypothetical protein TERM 362 294203 - 294228 + G 86 -8.1 -4.64676 | overlap 294204 294206 GATGAGTGGATGGAT GCTGGCCGCCT TGTT GGGCGGCCTGA TTTTGTTGGGACTGG TERM 363 294204 - 294227 + G 72 -11.6 -3.38324 | overlap 294203 294206 ATGAGTGGATGGATG CTGGCCGCCT TGTT GGGCGGCCTG ATTTTGTTGGGACTG TERM 364 294206 - 294225 + G 74 -12.8 -3.25538 | overlap 294204 294203 GAGTGGATGGATGCT GGCCGCCT TGTT GGGCGGCC TGATTTTGTTGGGAC AHA_0271 294201 - 294641 + | hypothetical protein hemN 294669 - 296042 + | coproporphyrinogen III oxidase TERM 365 296094 - 296065 - T 100 -16.7 -4.07885 | opp_overlap 296059 296073, overlap 296073 GATGTCGTTGGAAAA TAAAAAAACCGCC GAGA GGCGGTTTTTTTA TTGGGCTTGGCTGCA TERM 366 296073 - 296086 + T 100 -9.5 -5.80364 | opp_overlap 296065 296073, overlap 296059 TGGAAAATAAAAAAA CCGCC GAGA GGCGG TTTTTTTATTGGGCT TERM 367 296086 - 296073 - T 100 -9.5 -6.09196 | opp_overlap 296073 296059, overlap 296065 TGGAAAATAAAAAAA CCGCC GAGA GGCGG TTTTTTTATTGGGCT add-1 297112 - 296111 - | adenosine deaminase TERM 368 297203 - 297174 - R 100 -9.3 -5.05782 | opp_overlap 297176 297178, overlap 297176 297178 AGGGATCTCAAAAAA GATACCCCGTTTG AAAT CAAACGGGGTCTT ATTGGTCGGTGATTT TERM 369 297201 - 297176 - R 91 -11.9 -4.15748 | opp_overlap 297176 297178, overlap 297174 297178 GGATCTCAAAAAAGA TACCCCGTTTG AAAT CAAACGGGGTC TTATTGGTCGGTGAT TERM 370 297176 - 297201 + r 83 -11.9 -3.73914 | opp_overlap 297176 297174 297178, overlap 297178 GGATCTCAAAAAAGA TACCCCGTTTG AAAT CAAACGGGGTC TTATTGGTCGGTGAT TERM 371 297199 - 297178 - R 95 -14.5 -3.66769 | opp_overlap 297176 297178, overlap 297176 297174 ATCTCAAAAAAGATA CCCCGTTTG AAAT CAAACGGGG TCTTATTGGTCGGTG TERM 372 297178 - 297199 + r 95 -14.5 -3.44998 | opp_overlap 297178 297176 297174, overlap 297176 ATCTCAAAAAAGATA CCCCGTTTG AAAT CAAACGGGG TCTTATTGGTCGGTG ntrC 298672 - 297254 - | nitrogen regulation protein NR(I) glnL 299737 - 298682 - | nitrogen regulation protein NR(II) TERM 373 299773 - 299789 + r 80 -10.9 -3.83502 | opp_overlap 299773 GCTATACACCAGCAA TGCACCA ATG TGGTGCA TTTAGTCTACCCGTA TERM 374 299789 - 299773 - R 71 -10.9 -3.26545 | opp_overlap 299773 GCTATACACCAGCAA TGCACCA ATG TGGTGCA TTTAGTCTACCCGTA AHA_0276 300399 - 299818 - | hypothetical protein TERM 375 300446 - 300461 + r 86 -11.8 -3.77206 | opp_overlap 300446 CTATCAGAGAAAAAA CCCGCC TGTC GGCGGG TTTGGTCAAGTTCTG TERM 376 300461 - 300446 - R 100 -11.8 -5.39721 | opp_overlap 300446 CTATCAGAGAAAAAA CCCGCC TGTC GGCGGG TTTGGTCAAGTTCTG glnA 301901 - 300492 - | glutamine synthetase, type I typA 302253 - 304064 + | GTP-binding protein TypA TERM 377 304089 - 304104 + F 100 -10.4 -5.64274 | opp_overlap 304089 304091 ATCGACAGACAGAGA GAGGCC TTCG GGCCTC TTTTTTTATGCCTGA rbn 304238 - 305110 + | ribonuclease BN TERM 378 305133 - 305172 + F 100 -19.5 -4.07568 | gap 2, overlap 305136 CCTTGCTGTTAGCAT C-G-ACGACCGCCCCCATC AGCA GATGGGGGCGGTCGTTCCG TTTTGAGAGGAGAGG TERM 379 305136 - 305167 + F 100 -26 -3.36823 | overlap 305133 TGCTGTTAGCATCGA CGACCGCCCCCATC AGCA GATGGGGGCGGTCG TTCCGTTTTGAGAGG TERM 380 305392 - 305409 + G 73 -12.7 -3.24747 | opp_overlap 305390 305394, overlap 305396 AACCTCAACGTAAGC CAGGCCG GCGG CGGCCTG TTGGTGGTCTCCCAG dtd 305191 - 305628 + | D-tyrosyl-tRNA(Tyr) deacylase AHA_0280 306393 - 305617 - | hypothetical protein AHA_0282 306468 - 307376 + | acetyltransferase TERM 381 307428 - 307398 - T 100 -20.6 -3.14132 | opp_overlap 307398, overlap 307402 307405 GCTGGTTCCCATCAA GCAACAAGGCCTCA TCA CGAGGCCTTGTTGC TTTCTGTCGGTTAGC TERM 382 307398 - 307428 + T 100 -19.9 -4.09108 | opp_overlap 307398 307402 307405 GCTGGTTCCCATCAA GCAACAAGGCCTC ATCAC GAGGCCTTGTTGC TTTCTGTCGGTTAGC TERM 383 307424 - 307402 - T 95 -14.2 -3.39895 | opp_overlap 307398, overlap 307398 307405 GTTCCCATCAAGCAA CAAGGCCTCA TCA CGAGGCCTTG TTGCTTTCTGTCGGT TERM 384 307421 - 307405 - T 76 -10.1 -3.83844 | opp_overlap 307398, overlap 307402 307398 CCCATCAAGCAACAA GGCCTCA TCA CGAGGCC TTGTTGCTTTCTGTC TERM 385 307445 - 307497 + T 100 -16.2 -3.05844 | overlap 307448 TTCTGTCGGTTAGCC GTTGACCGC-CTGTGCGGCCGGGGCC TTC GGCGCCGGTCGC-CAGAGCGGGCTGC TGTTGCCCTGGGGCG TERM 386 307448 - 307494 + T 100 -18.7 -2.75074 | overlap 307445 TGTCGGTTAGCCGTT GACCGC-CTGTGCGGCCGGGGCC TTC GGCGCCGGTCGC-CAGAGCGGGC TGCTGTTGCCCTGGG AHA_0283 309505 - 307439 - | AsmA family protein TERM 387 309368 - 309409 + g 73 -10.7 -3.54424 | gap 1 TCGGCCTATGGTGAC GGGCACGCCGGTCTGCTGGC TGA GCCAGCTGGC-GATGGGCCC TTTGGCCCGCTCGGC recG 311720 - 309648 - | ATP-dependent DNA helicase RecG TERM 388 311868 - 311832 - R 100 -25.4 -3.33162 | opp_overlap 311839, overlap 311839 GAGCTGAGCCCACAA TGACAAAGGCCTGCCG ATGTG CGGCAGGCCTTTGTCA TGATCCCTGAGAGCG TERM 389 311839 - 311861 + r 100 -16.3 -3.99592 | opp_overlap 311839 311832 GCCCACAATGACAAA GGCCTGCCG ATGTG CGGCAGGCC TTTGTCATGATCCCT TERM 390 311861 - 311839 - R 100 -16.3 -4.1021 | opp_overlap 311839, overlap 311832 GCCCACAATGACAAA GGCCTGCCG ATGTG CGGCAGGCC TTTGTCATGATCCCT pssA 313264 - 311897 - | phosphatidylserine synthase TERM 391 313380 - 313349 - R 81 -11.7 -3.5362 | opp_overlap 313356, overlap 313350 313356 GAATCGTCATAAAGA TGAAAAAGGCCTC ACATTG GAGGCCTTTTTCC GGACGGTTGCGATCA TERM 392 313379 - 313350 - R 83 -15.2 -2.7169 | opp_overlap 313356, overlap 313349 313356 AATCGTCATAAAGAT GAAAAAGGCCTC ACATTG GAGGCCTTTTTC CGGACGGTTGCGATC TERM 393 313373 - 313356 - R 95 -8.4 -4.96106 | opp_overlap 313356, overlap 313350 313349 CATAAAGATGAAAAA GGCCTC ACATTG GAGGCC TTTTTCCGGACGGTT TERM 394 313356 - 313373 + r 87 -8.4 -4.57341 | opp_overlap 313356 313350 313349 CATAAAGATGAAAAA GGCCTC ACATTG GAGGCC TTTTTCCGGACGGTT AHA_0286 314733 - 313393 - | low affinity gluconate transporter aroK-1 314979 - 315488 + | shikimate kinase TERM 395 315813 - 315763 - g 70 -11.9 -3.24747 | gap 3 TCCGGACATCATCAA GGC-CG-CGCTGGCCGAGCTGGGC CACAGC GCCCAGGT-GGCCGGCGGCGTGCC TGCCATGTGCGACGG edd 315485 - 317281 + | phosphogluconate dehydratase eda 317302 - 317943 + | 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase TERM 396 317982 - 318012 + T 100 -16.3 -3.59023 | gap 1, opp_overlap 317985, overlap 317985 CTTCCGTTTGCCAAG CA-AGCAGGCCACC CTCG GGTGGCCTGCTCTG TTCTGGTTGTATGGC TERM 397 318008 - 317985 - T 100 -18.2 -3.33696 | opp_overlap 317982 317985 CCGTTTGCCAAGCAA GCAGGCCACC CTCG GGTGGCCTGC TCTGTTCTGGTTGTA TERM 398 317985 - 318008 + T 100 -18.2 -3.24091 | opp_overlap 317985, overlap 317982 CCGTTTGCCAAGCAA GCAGGCCACC CTCG GGTGGCCTGC TCTGTTCTGGTTGTA AHA_0290 319048 - 318041 - | HTH-type transcriptional regulator GntR TERM 399 319061 - 319086 + H 79 -3.3 -5.27335 | opp_overlap 319067, overlap 319063 CATCTCGGGATCCGG CAGAAATGTTA CACG TAACATTACCG TTTTTGTTTAACAAA AHA_0291 319139 - 319789 + | Qnr TERM 400 319873 - 319857 - T 100 -12.3 -5.14563 | opp_overlap 319857 GCGGCGATCAAAAAA GCCTGCA TGA TGCAGGC TTTTCTGGATGGCAG TERM 401 319857 - 319873 + T 95 -12.3 -4.42386 | opp_overlap 319857 GCGGCGATCAAAAAA GCCTGCA TGA TGCAGGC TTTTCTGGATGGCAG yibP 321221 - 319911 - | M23B family non-peptidase protein TERM 402 321158 - 321190 + g 95 -11.2 -4.42238 | gap 1, opp_overlap 321159 321162, overlap 321159 ACGACAGACAAAAAA ACAG-CGCGCCGGCC AACA GGCCGACGCGACTGG TTTTGGTTGAAATAA TERM 403 321159 - 321189 + g 80 -14.7 -3.2486 | gap 1, opp_overlap 321159 321162, overlap 321158 CGACAGACAAAAAAA CAG-CGCGCCGGCC AACA GGCCGACGCGACTG GTTTTGGTTGAAATA TERM 404 321189 - 321159 - G 100 -16.9 -5.76633 | gap 1, opp_overlap 321159 321158, overlap 321162 CGACAGACAAAAAAA CAG-CGCGCCGGCC AACA GGCCGACGCGACTG GTTTTGGTTGAAATA TERM 405 321185 - 321162 - G 91 -17.4 -3.28446 | opp_overlap 321159 321158, overlap 321159 CAGACAAAAAAACAG CGCGCCGGCC AACA GGCCGACGCG ACTGGTTTTGGTTGA gpmI 322955 - 321231 - | phosphoglyceromutase TERM 406 323146 - 323183 + G 100 -10.5 -4.85599 | overlap 323149 GCAGCCTGGTTCGGC CTGGCAGGCACCCTGGT TTAC ACCACGGTGCGTGCTCG TTTTTCTCCGGTGAA TERM 407 323149 - 323180 + G 74 -13 -3.32317 | overlap 323146 GCCTGGTTCGGCCTG GCAGGCACCCTGGT TTAC ACCACGGTGCGTGC TCGTTTTTCTCCGGT AHA_0294 323086 - 323517 + | rhodanese domain-containing protein secB 323565 - 324035 + | preprotein translocase subunit SecB AHA_0296 324038 - 325042 + | glycerol-3-phosphate dehydrogenase [NAD(P)+] (NAD(P)H-dependent glycerol-3-phosphate dehydrogenase) TERM 408 325061 - 325092 + T 100 -18.8 -3.57387 | opp_overlap 325066, overlap 325066 GCTCGCCGCAGAATG CAAAAGGCCCCGCC AGCT GGCGGGGCCTTTTC TTTGCCGCATGTCTT TERM 409 325066 - 325087 + T 100 -18.7 -4.87133 | opp_overlap 325066, overlap 325061 CCGCAGAATGCAAAA GGCCCCGCC AGCT GGCGGGGCC TTTTCTTTGCCGCAT TERM 410 325087 - 325066 - T 100 -18.7 -4.3208 | opp_overlap 325061 325066 CCGCAGAATGCAAAA GGCCCCGCC AGCT GGCGGGGCC TTTTCTTTGCCGCAT gntY 325704 - 325126 - | putative DNA uptake protein AHA_0298 326513 - 325785 - | comF family protein bioH 326550 - 327314 + | putative pimeloyl-BioC--CoA transferase BioH AHA_0300 327386 - 327619 + | flagellar hook protein FlgE AHA_0301 327621 - 328418 + | hypothetical protein AHA_0302 328514 - 328792 + | hypothetical protein TERM 411 328829 - 328816 - T 100 -9.5 -5.30686 | opp_overlap 328816 AACAGCGACAAAAAA GCCCC GCGA GGGGC TTTTTGCATTCCGGG TERM 412 328816 - 328829 + T 95 -9.5 -4.74103 | opp_overlap 328816 AACAGCGACAAAAAA GCCCC GCGA GGGGC TTTTTGCATTCCGGG AHA_0303 331352 - 328848 - | S1 RNA-binding domain-containing protein TERM 413 328975 - 328988 + g 93 -9.5 -4.72272 | overlap 328956 TCGGCCGGTTTGCGT GCCGG CTGG CCGGC TTTTTCATCCAGACG greB 331897 - 331424 - | transcription elongation factor GreB AHA_0305 332134 - 332853 + | transcriptional regulator OmpR envZ 332859 - 334160 + | osmolarity sensor protein TERM 414 334191 - 334162 - T 91 -15.1 -3.07935 | opp_overlap 334166, overlap 334166 AGTGGATTGATTGAA CGAAGGGCGTATC CGTG GATACGCCCTTTG CATGTCAGGCTTGCG TERM 415 334187 - 334166 - T 95 -14.5 -3.3782 | opp_overlap 334166, overlap 334162 GATTGATTGAACGAA GGGCGTATC CGTG GATACGCCC TTTGCATGTCAGGCT TERM 416 334166 - 334187 + T 95 -14.5 -3.7108 | opp_overlap 334166 334162 GATTGATTGAACGAA GGGCGTATC CGTG GATACGCCC TTTGCATGTCAGGCT AHA_0307 335110 - 334196 - | drug/metabolite exporter family protein TERM 417 335410 - 335394 - g 75 -4.3 -4.71482 | opp_overlap 335400, overlap 335386 335385 335397 AGGAAACGTGAAAAA TCACACC TCT GGCGGGA GTAATCTCGGTCGGG rpsJ 335374 - 335778 + | ribosomal protein S10 TERM 418 335840 - 335861 + G 73 -8.1 -4.04206 | gap 1 AAAGTGGGTATGACT CGC-ATCTTC ACT GAAGATGGCG TTTCTATCCCGGTGA rplC 335801 - 336433 + | ribosomal protein L3 rplD 336451 - 337056 + | 50S ribosomal protein L4 rplW 337053 - 337355 + | ribosomal protein L23 rplB 337371 - 338192 + | 50S ribosomal protein L2 rpsS 338215 - 338493 + | 30S ribosomal protein S19 rplV 338504 - 338848 + | ribosomal protein L22 TERM 419 338937 - 338958 + G 76 -8.1 -4.13767 | gap 1, opp_overlap 338936 CGAACACCAAAGACT TCGCTG-ACA ACC TGTACAGCGA TTTTCAAGTACGCCA rpsC 338852 - 339565 + | ribosomal protein S3 rplP 339579 - 339992 + | 50S ribosomal protein L16 TERM 420 340145 - 340127 - g 76 -10.2 -3.93256 | CACACTCTGAAACAA GTGCGTCG TGA CGTCGCAC GTATCAAGACTGTAC rpmC 339989 - 340183 + | ribosomal protein L29 TERM 421 340381 - 340345 - g 71 -8.6 -3.827 | gap 1 AACAACGAATGCAAA GCTGGCGAC-CTCGTGG AAAT CCGCGAATGCCGCCCGC TGTCCAAGACCAAGT rpsQ 340183 - 340431 + | ribosomal protein S17 TERM 422 340448 - 340474 + F 100 -18.1 -5.05782 | opp_overlap 340452 CGGTACTTTGTAGTC CAAACGGCCCC TTAGC GGGGCCGTTTG TTTTTTAGGCTACCT TERM 423 340470 - 340452 - f 85 -13.1 -3.60098 | opp_overlap 340448 ACTTTGTAGTCCAAA CGGCCCC TTAGC GGGGCCG TTTGTTTTTTAGGCT rplN 340579 - 340947 + | ribosomal protein L14 rplX 340959 - 341276 + | ribosomal protein L24 rplE 341290 - 341829 + | 50S ribosomal protein L5 AHA_0322 341840 - 342145 + | 30S ribosomal protein S14 rpsH 342167 - 342559 + | ribosomal protein S8 AHA_0324 342573 - 343106 + | 50S ribosomal protein L6 rplR 343116 - 343469 + | ribosomal protein L18 rpsE 343484 - 343984 + | ribosomal protein S5 rpmD 343991 - 344170 + | ribosomal protein L30 TERM 424 344359 - 344369 + G 73 -6.8 -4.30719 | TTGAAAATCCGTCTG CCGA AGT TCGG TTTCTTCTCCCGCAA rplO 344173 - 344610 + | ribosomal protein L15 secY 344619 - 345947 + | preprotein translocase subunit SecY TERM 425 346107 - 346155 + F 95 -15 -3.23853 | gap 2, opp_overlap 346116 346118, overlap 346109 346118 TTTACGGTTAGTACT TGCAACAAATAGTTGTGCTGGCTA ATA TAGCCAGC-CAACT-TTTGTTGTG TATTGGTTGACCGCC TERM 426 346109 - 346153 + F 100 -17.6 -3.18366 | gap 2, opp_overlap 346116 346118, overlap 346107 346118 TACGGTTAGTACTTG CAACAAATAGTTGTGCTGGCTA ATA TAGCCAGC-CAACT-TTTGTTG TGTATTGGTTGACCG TERM 427 346147 - 346116 - f 88 -11 -4.1711 | gap 1, opp_overlap 346109 346107 346118, overlap 346118 AGTACTTGCAACAAA TAGTTGTGCTGGCTA ATA TAGCCAGC-CAACTT TTGTTGTGTATTGGT TERM 428 346118 - 346145 + F 100 -13.6 -4.90002 | gap 1, opp_overlap 346118 346116, overlap 346109 346107 TACTTGCAACAAATA GTTGTGCTGGCTA ATA TAGCCAGC-CAAC TTTTGTTGTGTATTG TERM 429 346145 - 346118 - f 89 -13.6 -3.68324 | gap 1, opp_overlap 346109 346107 346118, overlap 346116 TACTTGCAACAAATA GTTGTGCTGGCTA ATA TAGCCAGC-CAAC TTTTGTTGTGTATTG rpsM 346228 - 346584 + | 30S ribosomal protein S13 TERM 430 346885 - 346909 + G 70 -9.9 -3.57792 | CCGGTCGTGAGTCTT CCATCCGCGCT CTG AACGCGGCTGG TTTCCGCATCACTAA rpsK 346599 - 346988 + | 30S ribosomal protein S11 rpsD 347028 - 347648 + | ribosomal protein S4 TERM 431 347683 - 347693 + G 74 -5.4 -4.63218 | GACACAATGCTGGGT TCTG TAA CAGA TTTTCTTAAACCGCG rpoA 347674 - 348663 + | DNA-directed RNA polymerase subunit alpha rplQ 348707 - 349090 + | ribosomal protein L17 TERM 432 349096 - 349122 + T 90 -10.9 -4.32049 | opp_overlap 349101, overlap 349101 TGCTGAGTGATAAAG AAAAAGCCGGG CTTGT CCCGGCTTTTC TTTTAATGGATTCTG TERM 433 349117 - 349101 - T 100 -10.8 -5.38958 | opp_overlap 349096 349101 AGTGATAAAGAAAAA GCCGGG CTTGT CCCGGC TTTTCTTTTAATGGA TERM 434 349101 - 349117 + T 100 -10.8 -5.13722 | opp_overlap 349101, overlap 349096 AGTGATAAAGAAAAA GCCGGG CTTGT CCCGGC TTTTCTTTTAATGGA TERM 435 349497 - 349472 - T 72 -2.6 -4.96848 | gap 1 CCTGGTACAGAAAAA GCCAGCCAG TGGTATGAG CT-GCTGGC AGAGGAGTGGCTAAT TERM 436 351822 - 351785 - T 77 -11.5 -3.61398 | opp_overlap 351790, overlap 351788 TCTTCTTGCTAACAA GAATGCAGAGTTAAGAA CTGA TTCTTAACTCTGTTTTC TTCAGCCTTGTGCTG TERM 437 351819 - 351788 - T 71 -7.4 -3.9461 | opp_overlap 351790, overlap 351785 TCTTGCTAACAAGAA TGCAGAGTTAAGAA CTGA TTCTTAACTCTGTT TTCTTCAGCCTTGTG TERM 438 351790 - 351817 + T 100 -14.4 -4.65747 | opp_overlap 351788 351785 TTGCTAACAAGAATG CAGAGTTAAGAA CTGA TTCTTAACTCTG TTTTCTTCAGCCTTG TERM 439 351945 - 351931 - T 74 -7.2 -4.07687 | opp_overlap 351921 351931 351925 ACTTCTTGGCGAAAA CCAAAT TTT ATTTGG TCCTTGTTGTACAGC TERM 440 352489 - 352477 - T 84 -9.1 -4.2354 | GAAAGGCGAAAAGAA CCCCT GTG AGGGG AGTGAAATAGAACCT TERM 441 355268 - 355287 + T 100 -13.6 -5.72207 | opp_overlap 355268 GCCACTACTTAAGAA GCCCAGTC TAAC GACTGGGC TTTTTTTCGTTTCCG TERM 442 355287 - 355268 - T 89 -13.6 -3.69395 | opp_overlap 355268 GCCACTACTTAAGAA GCCCAGTC TAAC GACTGGGC TTTTTTTCGTTTCCG TERM 443 355733 - 355712 - T 100 -13.7 -5.05113 | TGCACATAAAGAAAA GGGGACAGC GGCT GCCGTCCCC TCAAGTCATCTAGTC TERM 444 356132 - 356144 + T 77 -7.7 -4.23045 | TGAGGTGTTCCTTGC CCACA CCC TGTGG TTTATTCCCTGCTTA TERM 445 356533 - 356505 - T 100 -16.1 -3.80746 | opp_overlap 356511, overlap 356511 TGCTCAAAAAGAATA CAAAAAGCCGGGC TTT GCCCGGCTTTTTT TCTGAGGTGGTCAGC TERM 446 356527 - 356511 - T 100 -15.1 -5.25799 | opp_overlap 356511, overlap 356505 AAAAGAATACAAAAA GCCGGGC TTT GCCCGGC TTTTTTTCTGAGGTG TERM 447 356511 - 356527 + T 100 -15.1 -5.626 | opp_overlap 356511 356505 AAAAGAATACAAAAA GCCGGGC TTT GCCCGGC TTTTTTTCTGAGGTG AHA_0340 357545 - 356544 - | hypothetical protein TERM 448 356802 - 356816 + g 73 -8.6 -3.9777 | GACATCCTGATACCC CTGATC GCG GATCAG TTTCTGGATGTTGAA TERM 449 357577 - 357599 + r 93 -12.1 -4.25104 | GTATCCTAGCCATGC CTTGCGACA GTCTA TGTCGCAAG TTTTGCTGCGACAAC TERM 450 357715 - 357700 - R 77 -4 -5.05782 | overlap 357709 ATCGAGGCTAAAAAA TGATGA AAAT TCACCA AATGAAAGTGCTGTC AHA_0341 358220 - 357834 - | SirB family protein kefB 360073 - 358217 - | glutathione-regulated potassium-efflux system protein KefB AHA_0343 360824 - 360144 - | modulator of glutathione-dependent potassium efflux system AHA_0344 361717 - 360821 - | LysR family transcriptional regulator TERM 451 361013 - 360986 - GH 86 -12 -3.85698 | CCCGTCCGGCAGAAA GCTGATGCCGAC TCCG GCCAGCACCAGC GCCATCACCAGCCCC TERM 452 361437 - 361418 - GH 71 -10 -3.53012 | gap 1, opp_overlap 361396, overlap 361421 CGCCTTCTGGCGAAA CAGCGCCGG CAG CCGGCG-TG CCTCTTCCACCAGCT TERM 453 361435 - 361421 - GH 75 -12.8 -2.60496 | opp_overlap 361396, overlap 361418 CTTCTGGCGAAACAG CGCCGG CAG CCGGCG TGCCTCTTCCACCAG AHA_0345 361687 - 362529 + | clavaldehyde dehydrogenase AHA_0346 362617 - 362940 + | hypothetical protein TERM 454 363017 - 363033 + G 77 -4.3 -4.95155 | overlap 363003 CTGTTATTGGCCGTG CTGGCCG GTA CCGTCAG TTTTTCTGCTCTGGC TERM 455 363335 - 363287 - g 80 -5.2 -4.8622 | gap 2, opp_overlap 363294 CTGCTCAAGGAAAAA CCGGCG-A-TCCGCGGCCTGACCA TTC CGGGCATGCCCCAGAGTGCGCCAG GCATGGATATTCCGG AHA_0347 362990 - 363421 + | hypothetical protein TERM 456 363503 - 363528 + F 100 -20.5 -4.18018 | CACGGTCAGGTATGG GGGCCGCCATC GCGA GATGGCGGCCC TTTTACATCAGGGCG TERM 457 363808 - 363793 - g 71 -6 -4.25056 | overlap 363795 CACGCCATCAAGAAA CACGGG GATA CCCGGG TCGACAACTACTACT AHA_0348 363580 - 365799 + | protease II TERM 458 365839 - 365809 - f 83 -14.1 -2.83905 | GCATAAGTCACCACA GTTGCAGCCCTTG CCAGT CAAGGGCTGCAAA AGAATCTCACTCCTC TERM 459 366009 - 366033 + F 100 -17.3 -3.15354 | overlap 366012 GCCGTTATGACTCTT TAATTGGCCCC CTC GGGGCCAATTA TCTTCGGTTGGCATG TERM 460 366012 - 366030 + F 95 -14.6 -3.71686 | overlap 366009 GTTATGACTCTTTAA TTGGCCCC CTC GGGGCCAA TTATCTTCGGTTGGC TERM 461 366754 - 366718 - g 74 -4.9 -4.58283 | opp_overlap 366718 366751 GAAGGGGTGGAAAAA GGGCGACTTCGGCCTGG TCT CCGAGCTCAAGCCGGCC GAGCAGGCCTCGGCA AHA_0349 366071 - 367186 + | TRAP transporter solute receptor TAXI family protein TERM 462 367213 - 367260 + F 74 -10.5 -3.47227 | gap 1, overlap 367218 AGGGCCGCTGTCACT CTCTTCGACACCCGCCTGCCGC AGCCC GTGGCAG-CGGGTGTCGTGTCG TTGTACTCGTTGGCA TERM 463 367218 - 367255 + F 100 -20 -2.9834 | gap 1, overlap 367213 CGCTGTCACTCTCTT CGACACCCGCCTGCCGC AGCCC GTGGCAG-CGGGTGTCG TGTCGTTGTACTCGT TERM 464 368352 - 368365 + G 74 -9.5 -3.84451 | CCAAGCCCTGGCTGC GCCGG TTGA CCGGC TTTGCCTTTGGCGCC TERM 465 368537 - 368508 - g 70 -7.7 -4.07568 | overlap 368509 TGGGGCTGTTGAAAA TTGCCGCCAGCAA TGAG CCGCTGGCGGCGG AAGATCCGGACAAGC AHA_0350 367289 - 369841 + | TRAP transporter, 4TM/12TM fusion protein TERM 466 369892 - 369842 - T 100 -17.6 -3.40403 | opp_overlap 369858 369884, overlap 369843 369845 369858 GTGGTGCGAGCATAA CCAGGGTCAATGAAAACGGCGCCA TCA TGGCGCCGTTTTCATGCTCCCCGC TGGGGGCTTATTCCT TERM 467 369891 - 369843 - T 100 -21.1 -2.64099 | opp_overlap 369858 369884, overlap 369842 369845 369858 TGGTGCGAGCATAAC CAGGGTCAATGAAAACGGCGCCA TCA TGGCGCCGTTTTCATGCTCCCCG CTGGGGGCTTATTCC TERM 468 369889 - 369845 - T 100 -20.1 -2.86271 | opp_overlap 369858 369884, overlap 369843 369842 369858 GTGCGAGCATAACCA GGGTCAATGAAAACGGCGCCA TCA TGGCGCCGTTTTCATGCTCCC CGCTGGGGGCTTATT TERM 469 369876 - 369858 - T 100 -16 -4.41494 | opp_overlap 369858, overlap 369845 369843 369842 CAGGGTCAATGAAAA CGGCGCCA TCA TGGCGCCG TTTTCATGCTCCCCG TERM 470 369858 - 369876 + T 100 -16 -4.30576 | opp_overlap 369858 369845 369843 369842 CAGGGTCAATGAAAA CGGCGCCA TCA TGGCGCCG TTTTCATGCTCCCCG AHA_0351 370010 - 369900 - | hypothetical protein TERM 471 370041 - 370073 + r 76 -10.5 -3.63694 | GAGGGATTATTCCTG CGGATCCTGCTCCTG CAG CAGGCTCAGGGTCTG TTGTTCCACCTGGCT AHA_0352 370184 - 370032 - | hypothetical protein AHA_0353 370361 - 370987 + | hypothetical protein TERM 472 371031 - 371056 + T 71 -11.9 -2.54988 | opp_overlap 371036, overlap 371036 GGCGTGTGCAGACAA AAAAACGGGCC CTCA GGCCCGTTTTG CTATTCCATTTTCAT TERM 473 371051 - 371036 - T 100 -11.8 -5.71712 | opp_overlap 371031 371036 GTGCAGACAAAAAAA CGGGCC CTCA GGCCCG TTTTGCTATTCCATT TERM 474 371036 - 371051 + T 95 -11.8 -4.44284 | opp_overlap 371036, overlap 371031 GTGCAGACAAAAAAA CGGGCC CTCA GGCCCG TTTTGCTATTCCATT AHA_0354 372631 - 371078 - | multidrug resistance protein B AHA_0355 373683 - 372631 - | HlyD family secretion protein TERM 475 373149 - 373176 + g 81 -13.4 -3.62572 | gap 1 CATCCAGCACCAGCA GCCGCTC-GCGGG CGG CCTGCAGGGCGGC TTTGGCCTCCTGCTC AHA_0356 373780 - 374682 + | LysR family transcriptional regulator AHA_0357 374739 - 375053 + | hypothetical protein AHA_0358 376387 - 375068 - | proton/glutamate symporter AHA_0359 376422 - 376805 + | hypothetical protein AHA_0360 376908 - 377507 + | hypothetical protein TERM 476 377557 - 377531 - T 95 -10.8 -4.67608 | opp_overlap 377535, overlap 377533 377535 CAGGCCAACAGAAAA GACACGGGGCTC GAC GAGCCCCGTTTT TTTGCCTGTGAGCCG TERM 477 377555 - 377533 - T 100 -13.4 -3.94773 | opp_overlap 377535, overlap 377531 377535 GGCCAACAGAAAAGA CACGGGGCTC GAC GAGCCCCGTT TTTTTGCCTGTGAGC TERM 478 377553 - 377535 - T 100 -16 -3.55442 | opp_overlap 377535, overlap 377533 377531 CCAACAGAAAAGACA CGGGGCTC GAC GAGCCCCG TTTTTTTGCCTGTGA TERM 479 377535 - 377553 + T 100 -16 -5.50499 | opp_overlap 377535 377533 377531 CCAACAGAAAAGACA CGGGGCTC GAC GAGCCCCG TTTTTTTGCCTGTGA AHA_0361 378580 - 377612 - | HTH-type transcriptional regulator YidZ TERM 480 378714 - 378752 + H 100 -19.8 -2.50589 | opp_overlap 378722, overlap 378722 AGGGGACAAGTAGCA TCAAGCAATACGGCGACC CTG GGTCGCCGTATTTTTTGA ATGATTTATTTGCAA TERM 481 378744 - 378722 - H 100 -17.8 -3.41961 | opp_overlap 378714 378722 AGTAGCATCAAGCAA TACGGCGACC CTG GGTCGCCGTA TTTTTTGAATGATTT TERM 482 378722 - 378744 + H 100 -17.8 -5.13521 | opp_overlap 378722, overlap 378714 AGTAGCATCAAGCAA TACGGCGACC CTG GGTCGCCGTA TTTTTTGAATGATTT AHA_0362 378854 - 379015 + | hypothetical protein AHA_0363 379030 - 379332 + | hypothetical protein TERM 483 379364 - 379347 - f 76 -12.7 -2.78463 | opp_overlap 379333 379338 379347 AGCCTGCTGATGACA CGGCAGG CTTG CCTGCCG TGTTGACCCTTCTGC TERM 484 379347 - 379364 + F 81 -12.7 -3.07233 | opp_overlap 379347, overlap 379333 379338 AGCCTGCTGATGACA CGGCAGG CTTG CCTGCCG TGTTGACCCTTCTGC TERM 485 379690 - 379678 - g 72 -2.6 -4.67651 | opp_overlap 379682, overlap 379680 ATATTGCAAAAGAAA GAGC TCAGG GCCC TGGTGGTCTATGAGC AHA_0364 379381 - 380982 + | amino-acid ABC transporter binding protein AHA_0365 381214 - 382467 + | phospholipase D family protein TERM 486 382835 - 382860 + T 100 -9.7 -5.28176 | overlap 382836 ACATGCTATTTGCGA GGGGGTGACAT GCGA GTGTCACCCCA TTTTTTATGGCTCGC TERM 487 382836 - 382859 + T 89 -13.2 -3.76182 | overlap 382835 CATGCTATTTGCGAG GGGGTGACAT GCGA GTGTCACCCC ATTTTTTATGGCTCG TERM 488 382893 - 382922 + T 100 -19.5 -4.15222 | opp_overlap 382899, overlap 382899 GCTGAGCCGTGCCCA GAAAAAGACCGCC GATT GGCGGTCTTTTTC TTTGTTCAGCCCGAT TERM 489 382916 - 382899 - T 100 -12.7 -4.82901 | opp_overlap 382893 382899 CCGTGCCCAGAAAAA GACCGCC GATT GGCGGTC TTTTTCTTTGTTCAG TERM 490 382899 - 382916 + T 100 -12.7 -5.47159 | opp_overlap 382899, overlap 382893 CCGTGCCCAGAAAAA GACCGCC GATT GGCGGTC TTTTTCTTTGTTCAG AHA_0366 384065 - 382947 - | fatty acid desaturase family proteiin AHA_0367 384214 - 384834 + | DNA-binding transcriptional repressor FabR AHA_0368 384843 - 385220 + | hypothetical protein TERM 491 385234 - 385209 - T 95 -8.4 -5.00884 | gap 1, overlap 385211 AGCGTGGGGAAAAAA GAGAAGGAGTG ACCAG CACTCCTTC-C AGAACCACCATGACA TERM 492 385233 - 385211 - T 91 -12.1 -4.13561 | overlap 385209 CGTGGGGAAAAAAGA GAAGGAGTG ACCAG CACTCCTTC CAGAACCACCATGAC TERM 493 385248 - 385271 + T 95 -14.6 -3.58726 | opp_overlap 385252, overlap 385252 CCAGAACCACCATGA CAGAGCCGGG ATTA CCCGGCTTTG TTGTCTGTGCCGCGC TERM 494 385252 - 385267 + T 95 -11.8 -4.42974 | opp_overlap 385252, overlap 385248 AACCACCATGACAGA GCCGGG ATTA CCCGGC TTTGTTGTCTGTGCC TERM 495 385267 - 385252 - T 75 -11.8 -2.9696 | opp_overlap 385252 385248 AACCACCATGACAGA GCCGGG ATTA CCCGGC TTTGTTGTCTGTGCC AHA_0369 385570 - 385259 - | hypothetical protein AHA_0370 386310 - 385681 - | methyltransferase, putative AHA_0371 386421 - 388322 + | cell division protein FtsY TERM 496 388372 - 388389 + F 83 -12.7 -3.20382 | GTCGTGCGCCCCCAG CCCCGAC CCTG GTCGGGG TTGGTCACTGTCAGG ftsE 388413 - 389081 + | cell division ATP-binding protein FtsE AHA_0373 389081 - 390034 + | cell division membrane protein TERM 497 390304 - 390326 + F 100 -7.7 -5.52909 | AGCATGCTACTTTTC GGGGGTC CTTGATTGT GACCCCC TTTTTTTGACTGTTC TERM 498 390849 - 390897 + G 71 -9.3 -3.70773 | overlap 390852 CGAATACGTTCTGCG CAACTGGCGCATGGTCAAGGTGG CGA CCACCAAGGCCCAGCGCAAGCTG TTCTTCAATCTGCGC rpoH 390490 - 391344 + | alternative sigma factor RpoH TERM 499 391357 - 391386 + F 100 -15.9 -3.54129 | opp_overlap 391363, overlap 391363 TGATGCTTCCTCCCA TAAAAACAGGGCC TGAT GGCCCTGTTTTTG TTTGACGGGGATCTG TERM 500 391363 - 391380 + F 100 -12.7 -5.27335 | opp_overlap 391363, overlap 391357 TTCCTCCCATAAAAA CAGGGCC TGAT GGCCCTG TTTTTGTTTGACGGG TERM 501 391380 - 391363 - f 100 -12.7 -4.82901 | opp_overlap 391363 391357 TTCCTCCCATAAAAA CAGGGCC TGAT GGCCCTG TTTTTGTTTGACGGG AHA_0375 391471 - 392130 + | carbonic anhydrase hutC 392142 - 392846 + | histidine utilization repressor TERM 502 392874 - 392890 + F 100 -15.1 -5.56264 | opp_overlap 392874 ACTCTTTTTGACCAA GCCCGCC TCT GGCGGGC TTTTTTGTGTTTAAG TERM 503 392890 - 392874 - f 91 -15.1 -3.14211 | opp_overlap 392874 ACTCTTTTTGACCAA GCCCGCC TCT GGCGGGC TTTTTTGTGTTTAAG hutI 392933 - 394237 + | imidazolonepropionase hutG 394230 - 395174 + | formimidoylglutamase TERM 504 395199 - 395171 - f 100 -18.1 -3.38316 | CCATCAGTTAATCAA GTAGCGGCCTGCC ACC GGCTGGCCGCCAC CCTGCTGCATCGATA hutU 395229 - 396938 + | urocanate hydratase hutH 396943 - 398475 + | histidine ammonia-lyase TERM 505 398495 - 398524 + T 85 -11.5 -3.93236 | gap 1, opp_overlap 398500, overlap 398500 CCATCCCGCCCATAA C-AAAAGACCGCCC ATC GGGCGGTCTTTGCG TTTCTGGCGTTGGTA TERM 506 398518 - 398500 - T 100 -16 -4.77165 | opp_overlap 398495 398500 CCGCCCATAACAAAA GACCGCCC ATC GGGCGGTC TTTGCGTTTCTGGCG TERM 507 398500 - 398518 + T 100 -16 -3.89215 | opp_overlap 398500, overlap 398495 CCGCCCATAACAAAA GACCGCCC ATC GGGCGGTC TTTGCGTTTCTGGCG AHA_0381 399642 - 398545 - | calcium/proton antiporter TERM 508 399697 - 399722 + r 83 -12.6 -3.17051 | gap 1, opp_overlap 399693 399691 399712, overlap 399695 GGTAAGGAACAGGGT GGCGGCGCCAC ACGAG GTGGCGC-GCC TGTTCATGATAAAGG AHA_0382 401171 - 399804 - | EAL domain-containing protein TERM 509 401099 - 401089 - G 71 -8.2 -3.86346 | overlap 401090 TGACGGCTGTAGAAA CGGG GAT CCCG CAACAGCGCCATGTC TERM 510 401637 - 401656 + H 93 -9.3 -4.82901 | TATGAGTGTTTCTTT TGGTCCC CTTTGT GGGACCA TTTTTCTGCCCGCCG AHA_0383 401850 - 403808 + | regulatory protein CsrD TERM 511 403843 - 403818 - T 100 -19.1 -3.20723 | opp_overlap 403818 GCCTGATGAATGCAA GAGAGGGTCGC CTGG GCGACCCTCTC TTTTTGTGGTTCAGC TERM 512 403818 - 403843 + T 100 -19.1 -4.98255 | opp_overlap 403818 GCCTGATGAATGCAA GAGAGGGTCGC CTGG GCGACCCTCTC TTTTTGTGGTTCAGC AHA_0384 404856 - 403909 - | ACC deaminase/D-cysteine desulfhydrase family protein AHA_0385 404926 - 405789 + | MSHA biogenesis protein MshI AHA_0386 405786 - 405890 + | hypothetical protein AHA_0387 405890 - 406483 + | hypothetical protein AHA_0388 406483 - 407130 + | msha biogenesis protein mshj AHA_0389 407520 - 409193 + | msha biogenesis protein mshl AHA_0390 409271 - 410161 + | general secretion pathway protein A AHA_0391 410257 - 411255 + | TPR repeat-containing protein TERM 513 412715 - 412746 + G 70 -13 -2.87132 | gap 1 GGCCACTTGGCTGAC CGTGCT-CTCCGGCG AAG CGCCGGGCCAGCACG TCTATCACAAGGGGC AHA_0392 411288 - 412997 + | type IV pilin AHA_0393 413051 - 414271 + | GspF family protein AHA_0394 414449 - 414913 + | hypothetical protein AHA_0395 414987 - 415658 + | msha pilin protein mshb TERM 514 416140 - 416120 - f 83 -14 -2.73275 | opp_overlap 416120, overlap 416117 416115 GATTGATAGATATCA GGCGAGGC CAAGT GCCTCGCC TTTTATAAGAGATTT TERM 515 416120 - 416140 + F 100 -14 -4.39002 | opp_overlap 416117 416115 416120 GATTGATAGATATCA GGCGAGGC CAAGT GCCTCGCC TTTTATAAGAGATTT TERM 516 416218 - 416256 + G 89 -16 -3.53012 | opp_overlap 416239, overlap 416254 TTGCTGGGGATTCTG GCCGCCTTTGCCGTGC CCAAATT GCTGGGCAAAGGCGGC TTTGAAACCCAAACC AHA_0396 416158 - 416649 + | msha pilin protein mshc mshD 416636 - 417199 + | msha pilin protein mshd TERM 517 417763 - 417775 + G 95 -10.5 -4.65933 | opp_overlap 417737 417747 CTGGCCGGGATCTCG CCCGG CAG CCGGG TTTATTTTGCCAATC AHA_0398 417199 - 418020 + | putative msha biogenesis protein msho TERM 518 418100 - 418114 + F 81 -7 -4.72272 | ATGGCCATGTTGGCG GCGGCC ATG GGGCGC TTTTTGCTCGACAGC TERM 519 421244 - 421256 + G 70 -10.5 -3.65425 | overlap 421253 GCGGGACCGTGACCC CCGCC TGT GGCGG TTTCAGCTATATGAG TERM 520 422077 - 422047 - g 71 -5.3 -4.40561 | gap 1 GTGCTGGAAAAACAA CCGCAACAGCC-GC GTTG GCTGGCCGATCCGG GGAACCTGAACAGCC AHA_0399 418483 - 422166 + | MshQ TERM 521 422236 - 422257 + F 80 -5.1 -4.83615 | overlap 422241 GCGTTTGTCGGCTTG TGCGGGTGA GTGA TGACTCGCA TTTTTGTCGCGCCTG mreB 422371 - 423411 + | rod shape-determining protein MreB TERM 522 423418 - 423439 + F 91 -7.2 -5.00616 | opp_overlap 423420, overlap 423420 TACGAATAAGACCCA AAGCCGGC CAGCGT GCCGGCTC TTTTTTGACGACCCA TERM 523 423437 - 423420 - f 76 -9.8 -3.81258 | opp_overlap 423418 423420 CGAATAAGACCCAAA GCCGGC CAGCGT GCCGGC TCTTTTTTGACGACC TERM 524 423420 - 423437 + F 83 -9.8 -4.13561 | opp_overlap 423420, overlap 423418 CGAATAAGACCCAAA GCCGGC CAGCGT GCCGGC TCTTTTTTGACGACC mreC 423454 - 424359 + | rod shape-determining protein MreC mreD 424359 - 424844 + | rod shape-determining protein MreD maf-1 424896 - 425483 + | septum formation protein Maf AHA_0404 425670 - 427139 + | ribonuclease G TERM 525 427985 - 427974 - g 80 -5.8 -4.77036 | overlap 427977 TGGCAGGATGAAAAA CAGG GTGA CCTG CACCGGCTCGGGCTG AHA_0405 427170 - 431039 + | hypothetical protein AHA_0406 431074 - 431394 + | stress responsive A/B barrel domain family protein AHA_0407 431423 - 432229 + | carbon-nitrogen family hydrolase TERM 526 433109 - 433136 + G 80 -14.2 -3.14931 | gap 1 CTTGACGCCATCGAC GCACCGGCCGGCA CCA TGCCGGT-GGTGC TTGGTGCCGGCTGGC tldD 432389 - 433828 + | protein TldD AHA_0409 433861 - 434721 + | RpiR family transcriptional regulator TERM 527 434785 - 434768 - T 100 -12.7 -5.36441 | opp_overlap 434768 TGCCGATAGAAAAAA CCACCCG CTTG CGGGTGG TTTTTTTATGGGCCA TERM 528 434768 - 434785 + T 100 -12.7 -5.60993 | opp_overlap 434768 TGCCGATAGAAAAAA CCACCCG CTTG CGGGTGG TTTTTTTATGGGCCA AHA_0410 435414 - 434809 - | hypothetical protein TERM 529 435457 - 435440 - R 100 -14.1 -5.05505 | AGCAGAAAGCAAAAA GCCGGCC GACT GGCCGGC AGGGGATCAGAACTC AHA_0411 436537 - 435464 - | outer membrane protein murP 438093 - 436639 - | N-acetylmuramic acid phosphotransfer permease murQ 439089 - 438193 - | N-acetylmuramic acid-6-phosphate etherase TERM 530 439334 - 439315 - R 100 -16.4 -5.10461 | GTCAGCCAATAAAAA GCCCCGGC AAGG GCCGGGGC TGCAGATACGGGGCT AHA_0414 439607 - 439353 - | hypothetical protein AHA_0415 440436 - 439717 - | multiple drug resistance protein MarC TERM 531 440557 - 440539 - R 100 -13.1 -4.81551 | CAGCCATATGAAAAA GCCCCGC ACTGG GCGGGGC TCGGAATGGTTCAGG AHA_0416 441884 - 440568 - | major facilitator transporter AHA_0418 442132 - 442803 + | hypothetical protein AHA_0417 444002 - 442800 - | regulatory components of sensory transduction system TERM 532 443958 - 443979 + gT 70 -9.3 -3.64487 | opp_overlap 443960 ACTCTTGGTTGAACA GATCGGGCC TGAG GGCCCGGAC TTGTTGCAGATGTGC AHA_0419 446607 - 443941 - | hybrid sensory kinase TERM 533 444204 - 444238 + gr 91 -14.2 -3.01712 | overlap 444214 CGGCAGGGGCCGGCA GCAGCGTCAGCAGGCC GGC GGCCAGTTGCTGCTGC TGTTGCAACCCCAGC TERM 534 445813 - 445854 + gr 74 -10.1 -3.64371 | opp_overlap 445812 ATCGCCATAGAGCAG GGTGTCGAGCTGGTGATCG ACCT CGAACAGCAGCTCTATGCC TTTGGCCTCTGCCTT AHA_0420 447678 - 446608 - | TorS-related protein AHA_0421 448059 - 447685 - | sigma-B regulator RsbS AHA_0422 449460 - 448069 - | chemotaxis protein TERM 535 448318 - 448303 - GH 71 -10.4 -3.21416 | overlap 448306 GATGTCCAGTACGAA GACCCG GGCC CGGGTC TCGGCAATCTTGGTG TERM 536 450046 - 450021 - gR 81 -12.5 -3.14051 | opp_overlap 450045, overlap 450019 CCAGTTGCAGCAACA GGGCCAGCCGC TGTC GCGGATAGCCC TCGAACTGGGTTACG AHA_0424 449431 - 450123 + | AraC family transcriptional regulator AHA_0423 450508 - 450089 - | hypothetical protein TERM 537 450676 - 450698 + G 76 -9 -3.98282 | overlap 450679 GGTTTCCGGTGCCGG CATGGGGCAG GAT CGGCCCCCTG TTTCCTTCATGTCAC aphA 450541 - 451434 + | acid phosphatase/phosphotransferase TERM 538 451483 - 451457 - T 100 -22.4 -4.7629 | opp_overlap 451457 CCATGAATGGAAAAA GGGCCGGATCCT GTC AGGATCCGGCCC TTCTTTTGGGCGTCT TERM 539 451457 - 451483 + T 100 -22.4 -4.18908 | opp_overlap 451457 CCATGAATGGAAAAA GGGCCGGATCCT GTC AGGATCCGGCCC TTCTTTTGGGCGTCT AHA_0426 452342 - 451497 - | zinc protease AHA_0427 452713 - 452450 - | hypothetical protein TERM 540 453612 - 453628 + G 74 -13.7 -2.83012 | overlap 453601 GTGGCCCGCCCAGGT GGCCGAG CGG CTCGGCC TCTCCTGGTCCGATT AHA_0428 452830 - 453708 + | hypothetical protein TERM 541 453730 - 453746 + F 100 -15.1 -4.77036 | TGATTTCATTGACCG GGGCCGC GCT GCGGCCC TTTTTCATGGTGACG AHA_0429 453826 - 454347 + | acetyltransferase AHA_0430 454650 - 454474 - | hypothetical protein TERM 542 455035 - 455020 - R 72 -4 -4.79223 | opp_overlap 455020 CGACATGAGTAAAAA GCAAAC AATT ATTTGC AGTTTTTCCTTGAGG TERM 543 455089 - 455072 - R 100 -12.7 -4.82901 | opp_overlap 455072 TGTCGGCCACAAAAA GGGCTCC CGAG GGAGCCC TTTTTCATCACCAGG TERM 544 455072 - 455089 + r 100 -12.7 -4.72272 | opp_overlap 455072 TGTCGGCCACAAAAA GGGCTCC CGAG GGAGCCC TTTTTCATCACCAGG AHA_0431 456399 - 455122 - | NhaP-type Na+/H+ and K+/H+ antiporters metH 456603 - 460286 + | B12-dependent methionine synthase AHA_0433 460466 - 461422 + | ribosomal protein S6 modification protein TERM 545 461446 - 461474 + F 100 -15.4 -4.64598 | gap 1, opp_overlap 461450 461452, overlap 461450 TTGCCGCCACTCCAT CACACAGGGCGCC TTCG GGCGCCCTGT-TG TTTTTGGGCTCATTG TERM 546 461471 - 461450 - f 91 -17.3 -2.79796 | opp_overlap 461450 461446, overlap 461452 CGCCACTCCATCACA CAGGGCGCC TTCG GGCGCCCTG TTGTTTTTGGGCTCA TERM 547 461450 - 461471 + F 100 -17.3 -4.42748 | opp_overlap 461450 461452, overlap 461446 CGCCACTCCATCACA CAGGGCGCC TTCG GGCGCCCTG TTGTTTTTGGGCTCA TERM 548 461469 - 461452 - f 86 -14.1 -2.94747 | opp_overlap 461450 461446, overlap 461450 CCACTCCATCACACA GGGCGCC TTCG GGCGCCC TGTTGTTTTTGGGCT TERM 549 462043 - 462099 + G 74 -12.7 -3.34398 | overlap 462042 462043 462044 462093 CCCTGAGTGCGCCCA TCGGCCGCAAGGCCGGGTTGCTGCTGG CCA CCGTCTGCTATCTGGCCGTGGGGCCGC TGTTTGCCACCCCGC TERM 550 462044 - 462098 + G 80 -16.2 -2.60496 | overlap 462042 462043 462043 462093 CCTGAGTGCGCCCAT CGGCCGCAAGGCCGGGTTGCTGCTGG CCA CCGTCTGCTATCTGGCCGTGGGGCCG CTGTTTGCCACCCCG TERM 551 462398 - 462425 + G 85 -15 -3.62572 | gap 1 CGTCAATGGCTACCT CACCATGGACACC CTG GGTG-CCATGGTG TTTGGCATCGTCATC brnQ-1 461811 - 463145 + | branched-chain amino acid transport system II carrier protein TERM 552 463148 - 463175 + T 83 -14.2 -2.71364 | opp_overlap 463154, overlap 463154 GAGCGCGGCCTGAAT GCAAAACCGGCC TTTT GGCCGGTTTTGG TGGTTGAAACAATGA TERM 553 463169 - 463154 - T 93 -11.8 -4.27316 | opp_overlap 463148 463154 GGCCTGAATGCAAAA CCGGCC TTTT GGCCGG TTTTGGTGGTTGAAA TERM 554 463154 - 463169 + T 93 -11.8 -4.3534 | opp_overlap 463154, overlap 463148 GGCCTGAATGCAAAA CCGGCC TTTT GGCCGG TTTTGGTGGTTGAAA TERM 555 463189 - 463216 + T 100 -14.2 -4.7254 | opp_overlap 463192 463195, overlap 463192 GGTGGTTGAAACAAT GAACAAGGCGCC CTCG GGCGCCTTGTTG TTTTTACTCCCGCAT TERM 556 463213 - 463192 - T 100 -15.9 -3.61652 | opp_overlap 463189 463192, overlap 463195 GGTTGAAACAATGAA CAAGGCGCC CTCG GGCGCCTTG TTGTTTTTACTCCCG TERM 557 463192 - 463213 + T 100 -15.9 -4.47707 | opp_overlap 463192 463195, overlap 463189 GGTTGAAACAATGAA CAAGGCGCC CTCG GGCGCCTTG TTGTTTTTACTCCCG TERM 558 463210 - 463195 - T 90 -11.8 -3.93237 | opp_overlap 463192 463189, overlap 463192 TGAAACAATGAACAA GGCGCC CTCG GGCGCC TTGTTGTTTTTACTC AHA_0435 464431 - 463220 - | sensory transduction protein kinase TERM 559 463915 - 463944 + g 80 -16.5 -2.62184 | gap 1 GGGTGAGGTGGGCGA CCC-GCTGCTGCAG TCG CTGCAGCGGCCGGG TGATGTGGCGCACCA AHA_0436 465746 - 464475 - | response regulator TERM 560 465691 - 465728 + gH 91 -11.4 -4.34402 | AAAATGGTACAGCTG GGTCCATAGTTAAACC TCGCAC GGTTTGACCATGGGCC TTTTGCTATGACACG AHA_0437 465736 - 466215 + | hypothetical protein TERM 561 466800 - 466777 - g 75 -3 -4.88405 | overlap 466772 466780 466781 AACGGTGAAATAAAA CCAGGGACAG CGTC CAATACCTGG TGTTATCCGACCAAT AHA_0438 466510 - 467991 + | hemolysin TERM 562 468016 - 468032 + F 100 -15.1 -4.17309 | opp_overlap 468016 GTTGTGGTAATAGAA CCGGGCC TCT GGCCCGG TTGTTGTTTGTACTG TERM 563 468032 - 468016 - f 95 -15.1 -3.65812 | opp_overlap 468016 GTTGTGGTAATAGAA CCGGGCC TCT GGCCCGG TTGTTGTTTGTACTG AHA_0439 468494 - 470485 + | thiamine biosynthesis protein ThiC AHA_0440 470482 - 472098 + | thiamine monophosphate synthase thiF 472161 - 472919 + | thiazole biosynthesis adenylyltransferase ThiF TERM 564 472967 - 472946 - gf 95 -12.9 -4.07975 | CAACTCAACGATAAA GCCCAGCCG CTGG CGGCGGGGC AGAGTGTCGCCGACC thiS 472889 - 473122 + | thiamine biosynthesis protein ThiS TERM 565 473657 - 473702 + G 73 -10.9 -3.59979 | GGCCAATGTGCCGGT GGTGGTGGATGCGGGGATCGG TGCG CCGAGCCACGCCGCCGCTGCC TTTGAACTGGGCGCC thiG 473124 - 473891 + | thiazole synthase thiH 473927 - 475198 + | thiazole biosynthesis protein ThiH TERM 566 475198 - 475213 + F 81 -11.8 -3.57462 | CTTCCTGGGTCGATA GGGGCG GCTA CGCCCC TTTGCCGGTGGCATC TERM 567 475246 - 475272 + F 71 -10.1 -3.53444 | overlap 475247 GGCGTTCAGCCAGAC TCCGAGCCTGT GGCGA GCAGGCTCGGC TTTGCCGGGCAATCG TERM 568 475247 - 475271 + F 79 -13.6 -2.71924 | overlap 475246 GCGTTCAGCCAGACT CCGAGCCTGT GGCGA GCAGGCTCGG CTTTGCCGGGCAATC TERM 569 475361 - 475391 + F 70 -5.3 -4.38712 | CGCAAACAATTTTAC GCTGTGTTGCCGC TAGGT GAGGTCACGCAGC TTTTCTCCCAATGAC TERM 570 475983 - 475998 + F 83 -11.8 -3.73414 | GTTTTTGGGCCGATA GGGGCG GCCA CGCCCC TTTGCCTGTGGTATC AHA_0445 476309 - 478207 + | hypothetical protein AHA_0446 479021 - 478359 - | putative acetyltransferase TERM 571 479062 - 479080 + H 79 -7.4 -4.4009 | TACCCTAACGGAATC GGGTGG AGCCTGG CCACCC TTTTGTGCCCTCCGC TERM 572 479136 - 479146 + H 77 -8.2 -4.13246 | CGGTGGGCGCATCGA CCCC GTA GGGG TTTGTCTCTAGCATA AHA_0447 479239 - 479820 + | hypothetical protein TERM 573 479839 - 479874 + T 100 -25 -2.73364 | opp_overlap 479842, overlap 479842 GACGCGACCGTTCAA GAAGAGGGTTGAGTGC CTGT GCACTCAACCCTCTTC TCATTCCAGTCCCGC TERM 574 479871 - 479842 - T 100 -20.9 -3.62597 | opp_overlap 479839 479842 GCGACCGTTCAAGAA GAGGGTTGAGTGC CTGT GCACTCAACCCTC TTCTCATTCCAGTCC TERM 575 479842 - 479871 + T 100 -20.9 -3.51825 | opp_overlap 479842, overlap 479839 GCGACCGTTCAAGAA GAGGGTTGAGTGC CTGT GCACTCAACCCTC TTCTCATTCCAGTCC AHA_0448 480315 - 479899 - | acetyltransferase AHA_0449 480745 - 480428 - | hypothetical protein AHA_0450 481080 - 481985 + | GGDEF family protein TERM 576 482333 - 482344 + F 78 -2.2 -5.26316 | overlap 482310 482309 TGATCATGTTGATCG CAGG CGGG CTTG TTTTTTCTACGATCC TERM 577 483172 - 483145 - g 71 -9 -3.78934 | TGCGGCGCAGAAGAA GCGCTGTCAGGC GAGC GCCGACCAGCGC GCCAAGCGGATCATC AHA_0451 482444 - 483718 + | serine transporter TERM 578 483763 - 483744 - T 100 -15 -4.78149 | opp_overlap 483744 CGCACAAGTCAAAAA GGGCGACC CATG GGTCGCCC TTTTTCTTGGTGTTG TERM 579 483744 - 483763 + T 100 -15 -5.19251 | opp_overlap 483744 CGCACAAGTCAAAAA GGGCGACC CATG GGTCGCCC TTTTTCTTGGTGTTG AHA_0452 484489 - 483782 - | protein ExoD TERM 580 484324 - 484286 - G 72 -7.2 -4.21908 | opp_overlap 484308, overlap 484291 GAGCAGCACGCAAAA CAGCAGCATGCCCTGTTC GCC GACCAGGGCCAGCATCTG GCGCAGGCTGATATG TERM 581 485251 - 485285 + G 76 -7.8 -4.24948 | gap 1, overlap 485251 GCGGCGAGCTGGTGA CC-CAGTGGCAGGCC AATATC GGCCTGACCCTGCGG TTTTGAGTCTGGTGC AHA_0453 484671 - 485291 + | hypothetical protein TERM 582 485437 - 485449 + G 70 -10.5 -3.6682 | GGTCATGCGTTTCGT CGGCG AGC CGCCG TTTCCCTCCCTCGCC TERM 583 485743 - 485773 + G 78 -10.4 -4.03234 | gap 1, opp_overlap 485732 485741 CGAACCGGACAATCT GCCCAGCCAGCGG CTGTTT CGGC-GGCTGGGC TTTGTCTGGCAGCAG AHA_0455 485288 - 485839 + | acetyltransferase AHA_0454 486125 - 485820 - | hypothetical protein TERM 584 486331 - 486345 + G 73 -11.4 -3.59262 | CTGTTTCATCTGCGC GCGCAG ATC CTGCGC TTTGGCGATCTGCGC AHA_0457 486247 - 486612 + | putative transcriptional regulator AHA_0456 487043 - 486609 - | acetyltransferase TERM 585 487162 - 487141 - R 100 -15.9 -4.77567 | opp_overlap 487143 ACCCCCATAACAAAA CAGGCGACC CGCA GGTCGCCTG TTGCCGTTAGCCGGC TERM 586 487143 - 487160 + r 81 -12.7 -3.09492 | opp_overlap 487141 CCCCATAACAAAACA GGCGACC CGCA GGTCGCC TGTTGCCGTTAGCCG AHA_0458 487858 - 487169 - | hypothetical protein AHA_0459 488908 - 487871 - | fucose 4-O-acetylase TERM 587 488454 - 488407 - G 76 -12.6 -3.46602 | gap 1 GCCCGTAGAGCAGAA CGCCCAG-CAGCAGGGCCAGCCG GGG CAGGCGGGCCTGCTGGCAGAGCG CCAGGATCAGCACCG AHA_0460 489720 - 489085 - | PepSY-associated TM helix family protein TERM 588 489142 - 489163 + g 70 -10.1 -3.63515 | gap 1 CAGCAGGGCGATGCC GC-GCGCGGC CGG GCCGTGCAGC TTGTTCCACATCAGC TERM 589 489557 - 489581 + g 71 -12.7 -3.06696 | GACTTTTCGGTGTGG GGGCCGGGCAG CGG CAGCACGGCCC TGTGTTGCAGCCAGA TERM 590 489652 - 489670 + g 73 -8.8 -4.02817 | AAAGCCGGCCCAGGC GTGGATGC GGC GCACCCAC TTGTTGTTGTGCAGG TERM 591 489749 - 489726 - R 100 -16.8 -4.82901 | GGTGCTTCATAAAAA TCTGGCCAGC TGAA GCTGGCCAGA GGGATCGGGAAAAGG AHA_0461 491813 - 489771 - | TonB-dependent siderophore receptor AHA_0462 492951 - 492040 - | hypothetical protein TERM 592 492633 - 492613 - G 74 -12.5 -3.25823 | opp_overlap 492610 GTCGTCGGACAGGAA TCCGGCCCC GAC GGGGTCGGA CACTATGCTGAAAAT TERM 593 493050 - 493023 - R 100 -19.8 -4.18494 | overlap 493025 GACGGGGATGCAAAA GAGCGCGCCGGC ATCA GCCGGCGCGCGC AGTGCAGAGGGGCCC TERM 594 493048 - 493025 - R 100 -21 -3.69216 | overlap 493023 CGGGGATGCAAAAGA GCGCGCCGGC ATCA GCCGGCGCGC GCAGTGCAGAGGGGC AHA_0463 494283 - 493069 - | hypothetical protein glpX 494354 - 495364 + | fructose 1,6-bisphosphatase II TERM 595 495396 - 495412 + F 100 -13.7 -5.25699 | opp_overlap 495396 TGCTGAACGACCAAA GCCCGAC GCT GTCGGGC TTTTTGTTGTCTGCT TERM 596 495412 - 495396 - f 93 -13.7 -3.84246 | opp_overlap 495396 TGCTGAACGACCAAA GCCCGAC GCT GTCGGGC TTTTTGTTGTCTGCT AHA_0465 495522 - 495773 + | proteinase inhibitor TERM 597 495916 - 495875 - T 91 -17.5 -2.78073 | opp_overlap 495886, overlap 495886 ACCATTCGGAACAAT CCCAATAAAAAGAGGCCGC AACT GCGGCCTCTTTTTATTTCG TGACGAACGGACGTC TERM 598 495905 - 495886 - T 100 -15 -5.10208 | opp_overlap 495886, overlap 495875 CAATCCCAATAAAAA GAGGCCGC AACT GCGGCCTC TTTTTATTTCGTGAC TERM 599 495886 - 495905 + T 100 -15 -5.33405 | opp_overlap 495886 495875 CAATCCCAATAAAAA GAGGCCGC AACT GCGGCCTC TTTTTATTTCGTGAC AHA_0466 497093 - 495930 - | HemY protein AHA_0467 498180 - 497104 - | putative uroporphyrin-III C-methyltransferase hemD 498911 - 498177 - | uroporphyrinogen-III synthase hemC 499855 - 498908 - | porphobilinogen deaminase TERM 600 501115 - 501140 + G 76 -8.2 -4.128 | TCCATCGGCGACATG CAGCGGCTCG ATCTGG TGCGCCGCTG TTTCTATCTGAAGGT TERM 601 502368 - 502392 + G 70 -7.8 -3.97307 | overlap 502378 502381 CGGCATCGTCGACGC CTACGCCAGC GAGGG GCTGGTGCAG TTCTTCTTCGATACC cyaA 500161 - 502695 + | adenylate cyclase TERM 602 502779 - 502798 + T 95 -15 -3.70902 | opp_overlap 502779 CATATCGAATGAAAA CGGCCTGC ATCT GCAGGCCG TTTGGCTATCCGCGG TERM 603 502798 - 502779 - T 100 -15 -4.44548 | opp_overlap 502779 CATATCGAATGAAAA CGGCCTGC ATCT GCAGGCCG TTTGGCTATCCGCGG AHA_0471 503490 - 502819 - | carboxylesterase 2 AHA_0472 503801 - 503487 - | protein CyaY lysA 504072 - 505322 + | diaminopimelate decarboxylase TERM 604 505450 - 505462 + G 74 -4.8 -4.58395 | overlap 505429 GGTGGTGGATGGCGT CACC CAGAA GGTG TTTTTCAGCAATGAG dapF 505388 - 506218 + | diaminopimelate epimerase TERM 605 506260 - 506274 + F 87 -8.5 -4.62069 | CCAAGCACTAATGTC GGGGC CTTGT GCCCC TTTTTCGGATGGACC AHA_0475 506329 - 506979 + | hypothetical protein xerC 506972 - 507949 + | tyrosine recombinase XerC TERM 606 507973 - 507951 - f 75 -11.3 -3.41693 | gap 1, overlap 507954 CGGACGACGAATGAA GAGGGCCGGG CCCG CCCGGCC-TC GACAAGAGGAGATAC TERM 607 507971 - 507954 - f 81 -14.1 -2.56164 | overlap 507951 ACGACGAATGAAGAG GGCCGGG CCCG CCCGGCC TCGACAAGAGGAGAT TERM 608 508083 - 508061 - g 76 -12.6 -3.4072 | CACCCTCTATGACAA CGGCCCGGCC ATC GAGCGGGCCG AGCAGTGGATGCTGA AHA_0477 507990 - 508700 + | HAD-superfamily hydrolase, subfamily IA, variant 1 family protein AHA_0478 509209 - 508799 - | hypothetical protein TERM 609 509116 - 509136 + g 71 -9 -3.68351 | gap 1, overlap 509116 GCCACCCCGGGCTGG CCC-CCAGC AGCT GCTGGCGGG TTTCAATGGTCGCGG AHA_0479 510768 - 509242 - | small conductance mechanosensitive ion channel (MscS) family protein AHA_0480 510884 - 511297 + | hypothetical protein AHA_0481 512077 - 511307 - | glutamine amidotransferase, class I TERM 610 512430 - 512415 - R 93 -11.8 -4.34402 | opp_overlap 512412 GGCCGGATAGCAAAA GGGGCC CGCA GGCCCC TGGTCGTGTCAGGCG AHA_0482 513248 - 512439 - | phosphatase YidA AHA_0483 515047 - 513353 - | hypothetical protein TERM 611 515535 - 515573 + G 81 -15.1 -3.02144 | opp_overlap 515557 GTCAGCAGGCGGTGC TGGCCCGAGCCAGGGCC CAACA GGCACAGGCGCGGGCCG TCTTGGCCCGGCTGA AHA_0484 515309 - 516283 + | membrane-fusion protein TERM 612 516311 - 516325 + G 73 -7 -4.38712 | overlap 516305 516301 516312 GGCGCTGGGGGTGAG CCGCCG TTT CGGCGA TTTTCTGGCGGTGGA AHA_0485 516276 - 517205 + | ABC-type multidrug transport system, ATPase component AHA_0486 517312 - 518406 + | ABC-type multidrug transport system, permease component AHA_0487 519641 - 518484 - | competence/damage-inducible protein CinA TERM 613 519112 - 519084 - G 76 -6.6 -4.4715 | gap 1 GCCGAAGGTATAAAA GCGGCGCAGTTCG GTGT CGGTCTGCGC-GC CAGCCAGCGCCTTGA AHA_0488 521000 - 519702 - | HD-GYP domain-containing protein metA 521085 - 522038 + | homoserine O-succinyltransferase AHA_0490 522619 - 522047 - | protein tyrosine phosphatase TERM 614 522589 - 522603 + g 86 -8.5 -4.65895 | opp_overlap 522588, overlap 522580 CAATGGCGAGGCAAG CCGGG CTTGA CCCGG TTTTTGAGTGCGCCA TERM 615 522703 - 522691 - H 74 -2 -5.07567 | GCAGAGTCTAAAAAA TTGA GCGGT TCAA GGAGTAAAGATGAGA AHA_0491 522713 - 523183 + | AsnC family transcriptional regulator TERM 616 523204 - 523229 + T 100 -11.9 -4.65916 | opp_overlap 523209, overlap 523209 CGTCTGCCTCCTACA AAAAACCCGCC AATC GGCGGGTTTTG TTTTATTGCGCTCAG TERM 617 523224 - 523209 - T 100 -11.8 -5.24129 | opp_overlap 523204 523209 GCCTCCTACAAAAAA CCCGCC AATC GGCGGG TTTTGTTTTATTGCG TERM 618 523209 - 523224 + T 100 -11.8 -5.27476 | opp_overlap 523209, overlap 523204 GCCTCCTACAAAAAA CCCGCC AATC GGCGGG TTTTGTTTTATTGCG AHA_0492 525205 - 523241 - | sulfatase TERM 619 524989 - 524945 - G 70 -12.1 -3.16191 | gap 2 CCAGACCCGGATGAA CTGCAGCCAGGCACGGCCCAC GGCAT GGGGGCCG-GCC-AGCAGCAG GGTGAACACGGCGGG TERM 620 525172 - 525160 - G 84 -2.6 -5.30155 | CGATCAATGAAAAAA CGGC GATGG GCCA AAACGGTCCCAGCCA TERM 621 525227 - 525246 + H 89 -9.2 -4.63863 | TCCTACAAGCCTGTT TGCACCCG TCCA CGGGCGCA TTGTTTTTATATTGC AHA_0493 525465 - 525722 + | hypothetical protein TERM 622 525849 - 525874 + F 95 -8.2 -5.02074 | GGCTTCGCCTCTGAG GGCTTGCCGC CACCGC GCCGCAGGCC TTTTTTGCAGCCTGA AHA_0494 525968 - 527935 + | TonB-dependent copper receptor TERM 623 528080 - 528106 + G 75 -12.2 -3.63569 | overlap 528083 CAAGGAACGTTGCGC CATGGCGGCCTT ATC GGGGCCGCCCTG TTATTGACGGCTTGC TERM 624 529642 - 529660 + G 70 -11.6 -3.23216 | CGTGACGGTGGATTT GCCGCCGC TGA GCGGCCGC TTCCTGCTGGTGCGC AHA_0495 528005 - 529678 + | glycosidase TERM 625 529716 - 529698 - T 100 -11.7 -5.06414 | opp_overlap 529698 GGTTGGCAACAAAAA GGGCTCC GTGAT GGAGCCC TTTTTCATGGGGGAA TERM 626 529698 - 529716 + T 100 -12.4 -4.72272 | opp_overlap 529698 GGTTGGCAACAAAAA GGGCTCCG TGA TGGAGCCC TTTTTCATGGGGGAA AHA_0496 530263 - 529733 - | Mg2+ transporter AHA_0497 531733 - 530291 - | hypothetical protein AHA_0498 531920 - 532378 + | Pab N-terminal acetyltransferase AHA_0499 532393 - 532638 + | hypothetical protein AHA_0500 532695 - 533441 + | NADP-dependent l-serine/l-allo-threonine dehydrogenase ydfg TERM 627 533461 - 533488 + T 81 -8.4 -4.28018 | opp_overlap 533465, overlap 533463 533465 533465 TGCAGCTGACGAAAT AAAAGAGGCTCC CAAG GGAGCCTCTCTG TTTTGGTGGCCTCTT TERM 628 533463 - 533486 + T 79 -11 -3.73756 | opp_overlap 533465, overlap 533461 533465 533465 CAGCTGACGAAATAA AAGAGGCTCC CAAG GGAGCCTCTC TGTTTTGGTGGCCTC TERM 629 533484 - 533465 - T 100 -13.6 -4.93877 | opp_overlap 533463 533461 533465 533465 GCTGACGAAATAAAA GAGGCTCC CAAG GGAGCCTC TCTGTTTTGGTGGCC TERM 630 533465 - 533484 + T 88 -13.6 -3.44672 | opp_overlap 533465, overlap 533463 533461 533465 GCTGACGAAATAAAA GAGGCTCC CAAG GGAGCCTC TCTGTTTTGGTGGCC AHA_0501 535107 - 533503 - | cytosol non-specific dipeptidase TERM 631 535327 - 535353 + H 91 -9.5 -4.64676 | overlap 535330 GGGATCTGCACCAAT CTGGCAAGTTG GCCTG CAACTTGCTGG TTTTATTGCCAATGA AHA_0502 535441 - 535893 + | hypothetical protein TERM 632 536045 - 536025 - T 100 -9 -5.46657 | gap 1, opp_overlap 536025 CACGGCAACAAAAAA GGGAG-GGC GGCT GCCACTCCC TTGTTGACCGGACGG AHA_0503 536673 - 536092 - | hypothetical protein TERM 633 536453 - 536491 + g 78 -6.7 -4.59773 | gap 2 GCCAGGTTGGTGACC TGCTCACCGGCGACGATGT CGA ACGCC-TCGCCGGCG-GCA TTTTTCAGGCTGACC TERM 634 536814 - 536776 - H 88 -13.2 -3.40775 | gap 2, overlap 536762 536774 AGCGGCACGGAAACA GGGGCGGCGCCGCACG ACTTCCTTA CG-GCGGC-CCGCCCC CCGCTGCGCAATCTG AHA_0504 536885 - 538060 + | NADH-dependent iron-containing alcohol dehydrogenase TERM 635 538234 - 538216 - T 100 -10.2 -5.9873 | opp_overlap 538216 CGAGCAGAAAAAAAA CGCCCCGA TCA TTGGGGCG TTTTGCATGGTGTCA TERM 636 538216 - 538234 + T 93 -12.4 -4.22652 | opp_overlap 538216 CGAGCAGAAAAAAAA CGCCCCGA TCA TTGGGGCG TTTTGCATGGTGTCA AHA_0505 538963 - 538265 - | glutathione S-transferase III TERM 637 538988 - 538968 - R 100 -14 -5.00616 | opp_overlap 538967 CCGCTGGCCAAAAAA GAGCGGGC TGGAT GCCCGCTC CTGCGTTGACTGACT AHA_0506 540271 - 539003 - | O-acetylhomoserine sulfhydrylase MetY AHA_0507 540604 - 540428 - | hypothetical protein TERM 638 540685 - 540672 - H 72 -2.4 -4.86621 | overlap 540673 ATGCGGAAGTAAAAA CTGA TGACTT TCAG CAACAGGATTTCCCC AHA_0508 540675 - 542438 + | solute-binding family 5 protein AHA_0509 542474 - 542869 + | thioesterase family protein TERM 639 543349 - 543303 - g 76 -10.9 -3.72576 | gap 2, overlap 543304 543324 GTCTGGCTTACCAAA CGGGCGGCCGAGCT--GGGCAAA CTG TTTGCCCAGAGCCCGGCCGAACA GAAGGCGGCCAAGGG AHA_0510 542901 - 543614 + | hypothetical protein TERM 640 543658 - 543631 - T 76 -9.8 -3.78775 | opp_overlap 543635, overlap 543635 CGCGGCAGTATCAAA GCAAGGGGCCCA GATA TGGGCCCCTTTT TATTTTGGTTATTGT TERM 641 543635 - 543654 + T 100 -15 -5.54338 | opp_overlap 543631 543635 GCAGTATCAAAGCAA GGGGCCCA GATA TGGGCCCC TTTTTATTTTGGTTA TERM 642 543654 - 543635 - T 95 -15 -3.58162 | opp_overlap 543635, overlap 543631 GCAGTATCAAAGCAA GGGGCCCA GATA TGGGCCCC TTTTTATTTTGGTTA AHA_0511 544422 - 543679 - | lipase chaperone, putative AHA_0512 545420 - 544419 - | lipase TERM 643 545370 - 545352 - G 85 -14.6 -3.61715 | CATCCTTGTGAATAA GGTTGCCG CAG CGGCAACC ACCGGCCTCATGCCA TERM 644 545458 - 545479 + rH 72 -11.5 -3.04144 | opp_overlap 545458 GACAGATTCAAAAAA GCCCTACCC ATAT GGGCAGGGC TGTTGGCGGTGCCGG TERM 645 545479 - 545458 - RH 100 -13.7 -5.14477 | opp_overlap 545458 GACAGATTCAAAAAA GCCCTACCC ATAT GGGCAGGGC TGTTGGCGGTGCCGG AHA_0513 545622 - 545500 - | hypothetical protein AHA_0514 545621 - 546046 + | hypothetical protein AHA_0515 546068 - 546682 + | superoxide dismutase (Mn) TERM 646 546707 - 546736 + T 76 -12.1 -3.03124 | opp_overlap 546710, overlap 546710 546712 ATACCGAGCCCAATG AAAGAGACCCGCC TGTT GGCGGGTCTCTGC TATTGAGGGGTCAGC TERM 647 546710 - 546733 + T 95 -18.2 -2.74192 | opp_overlap 546710, overlap 546707 546712 CCGAGCCCAATGAAA GAGACCCGCC TGTT GGCGGGTCTC TGCTATTGAGGGGTC TERM 648 546733 - 546710 - T 100 -18.2 -3.91911 | opp_overlap 546710 546707 546712 CCGAGCCCAATGAAA GAGACCCGCC TGTT GGCGGGTCTC TGCTATTGAGGGGTC TERM 649 546712 - 546731 + T 86 -15 -2.9155 | opp_overlap 546710, overlap 546710 546707 GAGCCCAATGAAAGA GACCCGCC TGTT GGCGGGTC TCTGCTATTGAGGGG AHA_0516 547761 - 546736 - | sanA protein TERM 650 547910 - 547885 - R 73 -10.3 -3.33009 | opp_overlap 547888, overlap 547875 547888 TAAAATCGTTCATAA GCAGGGGCGGC CATG GCCGCCCCTTG TCATAGCCGTCTCGT TERM 651 547888 - 547907 + r 100 -16.4 -3.41229 | opp_overlap 547888 547885 547875 AATCGTTCATAAGCA GGGGCGGC CATG GCCGCCCC TTGTCATAGCCGTCT TERM 652 547907 - 547888 - R 90 -16.4 -2.83119 | opp_overlap 547888, overlap 547885 547875 AATCGTTCATAAGCA GGGGCGGC CATG GCCGCCCC TTGTCATAGCCGTCT AHA_0517 550675 - 547928 - | collagenase family protein TERM 653 551017 - 551005 - R 86 -10.5 -4.1899 | GTATCGTAGTGAAAA GCCGC CGG GCGGC AGTTGGCATGGCAAC TERM 654 551135 - 551120 - R 70 -6.8 -4.09685 | overlap 551128 551130 GCTCATCCTGCAAAA GGCGAA CAGA TCCGCC CGAGGTAATGAACAA TERM 655 551161 - 551130 - R 72 -11.6 -3.13141 | overlap 551120 551128 CAAAAGGCGAACAGA TCCGCCCGAGGT AATGAACA ACCCCGGGCAGA TGGCAGGAACGACCC AHA_0518 551550 - 551179 - | putative fimbrial protein TERM 656 552477 - 552463 - H 74 -2.9 -4.91712 | CTGAATTTATAAAAA TCAAA ATGTA TTTGA TGTGCATCATATGAG AHA_0519 552789 - 553331 + | fimbrial protein TERM 657 553347 - 553390 + F 79 -11.3 -3.61902 | gap 2 TAGAGTGCCTTAACG TGTGATCAGGGTTGTGGTGGT GCGA ACCACCACAAC-CTCA-CACA TTCTGTCTCCTCACA TERM 658 553610 - 553621 + G 82 -5.8 -4.92385 | TGAAGGGGCGACGGA GGCA TCAC TGCC TTTTATTTCCATGTC TERM 659 553763 - 553775 + G 74 -4.8 -4.56775 | overlap 553757 CAATTTGGGGCTCAC CAGC AGTCA GCTG TTTTTCCAAGACAGT AHA_0520 553413 - 553820 + | hypothetical protein AHA_0521 553888 - 556422 + | outer membrane usher protein AHA_0522 556433 - 557164 + | fimbrial chaperone protein TERM 660 557329 - 557313 - g 82 -3 -5.1971 | gap 1 ATTAAAAATGAAAAA GGCTATG AAAC CA-AGCC GCCATTGGAGTGGGA TERM 661 558151 - 558163 + G 75 -3.3 -4.91109 | CAGCAGGGGCAGATG TGGCC GCG GGCGA TTTTTATGCTACCGC AHA_0523 557169 - 558203 + | fimbrial protein AHA_0524 558215 - 558766 + | fimbrial protein AHA_0525 559452 - 558769 - | hypothetical protein AHA_0526 560009 - 559449 - | transcriptional regulatory protein, C terminal TERM 662 559958 - 559987 + g 81 -6.4 -4.73912 | opp_overlap 559958 TAGAGAGTCGGAATA TTGCCGCGGAGA AAAATA TCTCCTCTGCAA TTTTATAATTTTTGT menE 561717 - 560311 - | O-succinylbenzoate-CoA ligase menC 562657 - 561728 - | o-succinylbenzoic acid (OSB) synthetase menB 563517 - 562657 - | naphthoate synthase AHA_0530 564280 - 563510 - | alpha/beta fold family hydrolase TERM 663 563760 - 563809 + g 70 -12.7 -2.87132 | gap 1 TGGCCCAGGGAGGTG GCGCGCAGCAT-GGCGGCCACGGC CTC GCCGTCGTTGCCAAGGCGGCGGGC TATCTGGCGCGCGCG menD 566000 - 564270 - | 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylic acid synthase/2-oxoglutarate decarboxylase TERM 664 564501 - 564537 + g 70 -10.1 -3.61715 | overlap 564528 CAGCGCGTCCTGGGT CGGCACCGGCAGCAT GCGAAAG ATGCTGCCGCCGTCG TTGTTGAGCAGGATC TERM 665 565233 - 565191 - G 71 -12.7 -3.05384 | gap 1, overlap 565222 GTTGCGGCCATCGAA GCGCAGCTGG-CTCTGCAGA TCTG CCAGCAGAGGCCAGCCGAGC CGCTCGGCCAGGGCG TERM 666 566054 - 566033 - R 75 -6.5 -4.52703 | overlap 566034 GAAACGATGAGAAAA CGCTATCCC AGCA GGGAGAGCA CGTTGGCGATCTTGT menF 567381 - 566035 - | menaquinone-specific isochorismate synthase TERM 667 566290 - 566260 - G 70 -11.7 -3.14132 | GCGTTCGCGGATGAA GGCCAGCGCCGCC TCGCG GGGGGCGCCGCCC ACTGCGGGGGTGGGG TERM 668 567074 - 567049 - G 73 -13.3 -3.21099 | gap 1, overlap 567050 GCGGGGCAGCACGAA GC-GGCAGGGGC CGA ACCCCTGCCAGC CGGGCTGGGTGGGGT TERM 669 567072 - 567050 - G 71 -13.4 -2.52516 | overlap 567049 CGGGGCAGCACGAAG CGGCAGGGGC CGA ACCCCTGCCA GCCGGGCTGGGTGGG menA 567571 - 568494 + | 1,4-dihydroxy-2-naphthoate octaprenyltransferase TERM 670 568543 - 568524 - f 90 -10.6 -4.27584 | opp_overlap 568524 ATCGGCAAGGCAAAA GGGCTCCC GGAC GGGGGCCC TTTTTGTTGGTTGGG TERM 671 568524 - 568543 + F 100 -12.8 -5.1963 | opp_overlap 568524 ATCGGCAAGGCAAAA GGGCTCCC GGAC GGGGGCCC TTTTTGTTGGTTGGG AHA_0534 568547 - 568816 + | hypothetical protein TERM 672 568823 - 568870 + T 84 -13.5 -3.14132 | gap 2, opp_overlap 568818 568830 568833, overlap 568833 CAAGCGTAAAGGCGC GCTGAAAC-C-AGGAGGGCTCCC GTGT GGGAGCCCTCCTTGAGTGGCGGC TTGGTGCGGCGCACG TERM 673 568861 - 568830 - T 100 -20.2 -3.5394 | opp_overlap 568823 568833, overlap 568818 568833 AAAGGCGCGCTGAAA CCAGGAGGGCTCCC GTGT GGGAGCCCTCCTTG AGTGGCGGCTTGGTG TERM 674 568833 - 568858 + T 100 -20.5 -3.06133 | opp_overlap 568830 568818 568833, overlap 568823 GGCGCGCTGAAACCA GGAGGGCTCCC GTGT GGGAGCCCTCC TTGAGTGGCGGCTTG TERM 675 568858 - 568833 - T 100 -20.5 -2.90496 | opp_overlap 568833 568823, overlap 568830 568818 GGCGCGCTGAAACCA GGAGGGCTCCC GTGT GGGAGCCCTCC TTGAGTGGCGGCTTG AHA_0535 570293 - 568896 - | propeptide, PepSY amd peptidase M4:PepSY-associated TM helix AHA_0536 570566 - 570961 + | hypothetical protein AHA_0537 571435 - 571145 - | hypothetical protein TERM 676 571500 - 571472 - R 100 -18.9 -2.72745 | opp_overlap 571476 571478, overlap 571476 GGCACGGATAAATAT GAAACAGGCGCCG AAC CGGCGCCTGTGTC GTGAACCTTAGCCCA TERM 677 571476 - 571496 + r 95 -18.3 -2.79831 | opp_overlap 571476 571472, overlap 571478 CGGATAAATATGAAA CAGGCGCCG AAC CGGCGCCTG TGTCGTGAACCTTAG TERM 678 571496 - 571476 - R 100 -18.3 -4.04579 | opp_overlap 571476 571478, overlap 571472 CGGATAAATATGAAA CAGGCGCCG AAC CGGCGCCTG TGTCGTGAACCTTAG TERM 679 571478 - 571494 + r 86 -15.1 -2.94595 | opp_overlap 571476 571472, overlap 571476 GATAAATATGAAACA GGCGCCG AAC CGGCGCC TGTGTCGTGAACCTT AHA_0538 572884 - 571508 - | ATP-independent RNA helicase DbpA TERM 680 573222 - 573238 + H 80 -5.1 -4.89966 | AGCTGTGAAAATAGC CCTTTCA GAC TGAATGG TTTATTTTTAACTAT AHA_0539 573287 - 574654 + | nucleoside permease NupC TERM 681 574679 - 574704 + T 100 -17.7 -5.00616 | opp_overlap 574683, overlap 574683 CCGCTCTCTCCATGA CAAACCCCTGC CTCG GCAGGGGTTTG TTTTTTGGGGCGACA TERM 682 574683 - 574700 + T 100 -12.7 -5.04249 | opp_overlap 574683, overlap 574679 TCTCTCCATGACAAA CCCCTGC CTCG GCAGGGG TTTGTTTTTTGGGGC TERM 683 574700 - 574683 - T 93 -12.7 -3.96148 | opp_overlap 574683 574679 TCTCTCCATGACAAA CCCCTGC CTCG GCAGGGG TTTGTTTTTTGGGGC AHA_0540 575247 - 574747 - | putative hydrolase TERM 684 575153 - 575190 + g 83 -13.3 -3.85698 | GCAGGAATGGTGTGC CACAGGCTGGCGTCGGC CAGG GCCGGCGTCAGCTGGAG TTTGTGGGCGAGCAG TERM 685 575336 - 575314 - R 100 -7.7 -5.15634 | gap 2, opp_overlap 575314 CATTGCAGCAAAAAA CCGGG--GCCC GAT GGGCAGCCCGG TCATTAACTGCGCGG AHA_0541 575894 - 575340 - | cytochrome B TERM 686 575933 - 575913 - R 100 -15.4 -4.03234 | opp_overlap 575926 575927 GTGGCTCCATAGAAA GGGCCGGC AGGAG GCCGGCCC ATGGCCGGATTATTC TERM 687 575926 - 575942 + r 70 -9.3 -3.74361 | opp_overlap 575913, overlap 575927 AAGGGCCGGCAGGAG GCCGGCC CAT GGCCGGA TTATTCGTCGATCTC TERM 688 575927 - 575941 + r 76 -12.8 -2.84134 | opp_overlap 575913, overlap 575926 AGGGCCGGCAGGAGG CCGGCC CAT GGCCGG ATTATTCGTCGATCT AHA_0542 576212 - 575943 - | hypothetical protein TERM 689 576325 - 576305 - R 95 -14 -3.27297 | overlap 576303 AGGTAGGAATGAATA TCCCCGGC TGGAT GCCGGGGA GGGGGTAATCAACTC AHA_0543 576786 - 576334 - | YaiI/YqxD family protein zntB 576898 - 577884 + | zinc transporter AHA_0545 577894 - 578412 + | hypothetical protein TERM 690 578433 - 578418 - T 95 -10.4 -4.54821 | opp_overlap 578418, overlap 578413 ACCGGAATGAGAAAA GGCTCC TGCG GGAGCC TTTTTTGAGCCTGCC TERM 691 578418 - 578433 + T 100 -10.4 -5.03314 | opp_overlap 578418 578413 ACCGGAATGAGAAAA GGCTCC TGCG GGAGCC TTTTTTGAGCCTGCC AHA_0546 578703 - 578455 - | hypothetical protein AHA_0547 579342 - 578767 - | molecular chaperones TERM 692 579043 - 579084 + g 75 -14.3 -2.71011 | opp_overlap 579033 579032 GTAACTGCGCAGCGC CTCGCCTTGGGCGAGGGCG CTTG CCCCCTCGCGAATGGCGAG TGGTTCGAGCCGGAT AHA_0548 581294 - 579339 - | sodium/hydrogen exchanger family protein mtlR 581824 - 581303 - | mannitol repressor protein TERM 693 581846 - 581872 + r 100 -12.3 -4.95155 | overlap 581848 ATTGGGTCCAGCTGA CAGGGAGAGAG TGGGC CTCTCTCCCGG TTTTTATCGTATGAG TERM 694 581848 - 581870 + r 79 -13.5 -2.73099 | overlap 581846 TGGGTCCAGCTGACA GGGAGAGAG TGGGC CTCTCTCCC GGTTTTTATCGTATG AHA_0550 583201 - 581933 - | mannitol-1-phosphate 5-dehydrogenase TERM 695 583001 - 583024 + gr 77 -11 -3.57144 | GTCGGCGAAGGTGAC CTGGTGGCTG GCGT CAGCCAACAG TTTGCCGATGAAGCC AHA_0551 585038 - 583116 - | pts system mannitol-specific eiicba component (eiicba-mtl) (eii-mtl) TERM 696 584610 - 584598 - GR 71 -9.1 -3.75024 | GCCGATCACGAAGAA GGCGA GGA TCGCC AGCAGCATGCCGATG TERM 697 584722 - 584698 - GR 81 -12.1 -3.53091 | ATCGCCTTGTCGAAA CGCTTGATGGC CCA GCCACCGAGCG GGCCGACCATCATGG AHA_0552 586539 - 585493 - | transport protein AHA_0553 587286 - 586561 - | TetR family transcriptional regulator TERM 698 587317 - 587301 - R 100 -13.7 -5.4505 | opp_overlap 587301 TGGTCCAATAAAAAA GCCCGCA GAG TGCGGGC TTTTTACAAGGTGGG TERM 699 587301 - 587317 + r 100 -13.7 -4.58395 | opp_overlap 587301 TGGTCCAATAAAAAA GCCCGCA GAG TGCGGGC TTTTTACAAGGTGGG rnb 589364 - 587343 - | exoribonuclease II AHA_0555 590364 - 589465 - | chromosome replication initiation inhibitor protein TERM 700 590596 - 590615 + r 100 -10.7 -5.71712 | AGCGAGAACTTTTAA TCCCGGG TCTTAC CCCGGGA TTTTTTTGTGTCGCC AHA_0556 591255 - 590632 - | autoinducer synthesis protein AhyI ahyR 591318 - 592103 + | transcriptional activator protein AhyR TERM 701 592121 - 592106 - f 75 -6.1 -4.67982 | GCTGATGCAATAAAA CCCGA TGATTC TCGGG GCAGAGTGATTGGCT AHA_0558 592316 - 592936 + | arginine exporter protein ArgO AHA_0559 593051 - 595042 + | 2',3'-cyclic-nucleotide 2'-phosphodiesterase TERM 702 595088 - 595070 - T 100 -16 -5.80364 | opp_overlap 595070 ATGGCAATAAAAAAA GCCCTCGC ACT GCGAGGGC TTTTTCATGGGCGGA TERM 703 595070 - 595088 + T 100 -16 -4.72272 | opp_overlap 595070 ATGGCAATAAAAAAA GCCCTCGC ACT GCGAGGGC TTTTTCATGGGCGGA AHA_0560 595584 - 595108 - | surface antigen family protein TERM 704 595718 - 595733 + r 95 -10.4 -4.56597 | overlap 595716 AAACCCTGTCACCGC CGGCTC AGCC GAGCCG TTTTTCCAGCAGCAG AHA_0561 596174 - 595722 - | acetyltransferase AHA_0562 596750 - 596295 - | hypothetical protein TERM 705 596773 - 596756 - R 100 -12.7 -5.40072 | opp_overlap 596756, overlap 596740 CGGCGGGCAAAAAAA CAGGGCC CGCG GGCCCTG TTTCATCAGACAGCT TERM 706 596756 - 596773 + r 86 -12.7 -3.72695 | opp_overlap 596740 596756 CGGCGGGCAAAAAAA CAGGGCC CGCG GGCCCTG TTTCATCAGACAGCT AHA_0563 598605 - 596803 - | aminopeptidase P AHA_0564 599304 - 598639 - | GntR family transcriptional regulator TERM 707 598731 - 598776 + g 74 -14.8 -2.57344 | gap 3, overlap 598731 CCGCCTCGTGCTTGC GGCGGGCGCG-GCACAGCTCCAG CAG CTGG-GC-GTGCTCGCGCTCGGC CTTGTCGACGCCATC TERM 708 598731 - 598777 + g 82 -14.6 -3.29144 | overlap 598731 CCGCCTCGTGCTTGC GGC-GGGCGCG-GCACAGCTCCAG CAG CTGG-GC-GTGCTCGCGCTCGGCC TTGTCGACGCCATCG TERM 709 599452 - 599428 - R 100 -16.5 -5.40072 | CTCTGCTCAAAAAAA TACCGGCCAGC TGG GCTGACCGGTA TGAGATTGGCAGTAA pckA 601105 - 599480 - | phosphoenolpyruvate carboxykinase TERM 710 601228 - 601254 + r 74 -11.6 -3.30854 | opp_overlap 601233, overlap 601218 TTTTTGTTATTTAAG TTAAAGGCGGGT TTT GCCCGCCTTCAA TTAGTGTAACTTGTT TERM 711 601249 - 601233 - R 80 -10.8 -3.76952 | opp_overlap 601228 601218 GTTATTTAAGTTAAA GGCGGG TTTTG CCCGCC TTCAATTAGTGTAAC hslO 602142 - 601255 - | 33 kDa chaperonin HslO AHA_0567 602838 - 602248 - | heat shock protein 15 gspC 602786 - 603709 + | general secretion pathway protein C TERM 712 604664 - 604624 - g 76 -10.9 -3.79906 | overlap 604625 CGAGGCGGACAAGAA GGGCGGCGCGGCCACCACC ACG GGCGGTGGCGGTGCCAGCA TCGGCGGCGGCAAGC TERM 713 604663 - 604625 - g 77 -14.4 -2.87622 | overlap 604624 GAGGCGGACAAGAAG GGCGGCGCGGCCACCACC ACG GGCGGTGGCGGTGCCAGC ATCGGCGGCGGCAAG gspD 603731 - 605764 + | general secretion pathway protein D TERM 714 605798 - 605820 + G 74 -10.5 -3.75153 | ATGGCGTCGACATGC CGGCAGCCC TGCCC GAGCTGCCG TTTGCCTTCGCCCGC gspE 605764 - 607269 + | general secretory pathway protein E TERM 715 607421 - 607441 + G 73 -11.1 -3.62775 | ACCGAGAAGGCCAAG CGCGAGGCG AAC CGCTTCGTG TTGTTCCGCCGTGGT gspF 607271 - 608491 + | general secretion pathway protein F gspG 608607 - 609038 + | general secretion pathway protein G gspH 609202 - 609753 + | general secretion pathway protein H gspI 609750 - 610109 + | general secretion pathway protein I gspJ 610178 - 610807 + | general secretion pathway protein J gspK 610897 - 611922 + | general secretion pathway protein K TERM 716 611965 - 611926 - f 90 -12 -3.9461 | gap 1, overlap 611883 GGCGCCGAATAACAA GGGA-GGCGGGCGACGGCC GTT GGCCAGCTCGCGCCATCCC CCGATTGGACTGCAG gspL 612042 - 613226 + | general secretion pathway protein L gspM 613223 - 613714 + | general secretion pathway protein M TERM 717 613722 - 613754 + F 74 -10.6 -3.60627 | opp_overlap 613720 613718 613717 CCCAATGAAACCACG CGTCCCGAGCAGG-GC CCC GCGCCTGATCGGG-CG TTTGCAGTCGAGTCG gspN 613776 - 614531 + | type II secretion system protein N TERM 718 614560 - 614591 + T 100 -20.2 -3.29511 | opp_overlap 614563, overlap 614563 TGAGCTGGCAAGCAT CAACACCACCCCGC CCCG GCGGGGTGGTGTCG TTATGGGGGCGTGCC TERM 719 614563 - 614588 + T 100 -20.5 -2.82742 | opp_overlap 614563, overlap 614560 GCTGGCAAGCATCAA CACCACCCCGC CCCG GCGGGGTGGTG TCGTTATGGGGGCGT TERM 720 614588 - 614563 - T 100 -20.5 -3.27298 | opp_overlap 614563 614560 GCTGGCAAGCATCAA CACCACCCCGC CCCG GCGGGGTGGTG TCGTTATGGGGGCGT AHA_0580 615503 - 614592 - | LuxR family transcriptional regulator TERM 721 614979 - 614937 - G 75 -11.8 -3.62275 | opp_overlap 614935 614953, overlap 614927 ATGCACCAGTGGAAA CAGCGCCTCCAGCCGGGCCA GCT CGTCACGGCTGAGGGAGCTG CGCTTGTCGAGCCGC TERM 722 615926 - 615887 - g 84 -8.6 -4.52589 | gap 3, overlap 615889 TCGGCCCAGATAAAA GC-GCTGCTGCCGGCCAGC GAAGG GCTGGC-GGC-GCCGCTGC TGGTCAACAACGCCG tyrS-1 615563 - 616831 + | tyrosyl-tRNA synthetase TERM 723 616850 - 616867 + T 100 -12.7 -5.0065 | opp_overlap 616850 ACCCGGGATCGACAA GGGCTGC CTGG GCAGCCC TTTTGTTTATCCGTC TERM 724 616867 - 616850 - T 84 -12.7 -3.35798 | opp_overlap 616850 ACCCGGGATCGACAA GGGCTGC CTGG GCAGCCC TTTTGTTTATCCGTC AHA_0582 617593 - 616925 - | HAD family hydrolase TERM 725 618291 - 618254 - g 76 -13.5 -3.1876 | gap 1, overlap 618255 AACCGGATCGACGAA TTGCTGGCGCGACCCGAT TTT ACCGAGTCGCG-CAGCAT CAGTGCGCTGCTGCT TERM 726 618290 - 618255 - g 83 -17 -2.50935 | gap 1, overlap 618254 ACCGGATCGACGAAT TGCTGGCGCGACCCGAT TTT ACCGAGTCGCG-CAGCA TCAGTGCGCTGCTGC nudE 617780 - 618340 + | ADP-ribose diphosphatase NudE cysQ-1 618378 - 619190 + | 3'(2'),5'-bisphosphate nucleotidase TERM 727 619216 - 619246 + F 100 -25.6 -3.29649 | opp_overlap 619202 619223, overlap 619220 AGGTCATCATTGACG GCAATCAGGCGGCC CAT GGCCGCCTGATTGC TTGGTGTGATCCGCT TERM 728 619220 - 619242 + F 100 -19.2 -3.43785 | opp_overlap 619202 619223, overlap 619216 CATCATTGACGGCAA TCAGGCGGCC CAT GGCCGCCTGA TTGCTTGGTGTGATC TERM 729 619239 - 619223 - f 83 -15.1 -2.73681 | opp_overlap 619220 619216, overlap 619202 CATTGACGGCAATCA GGCGGCC CAT GGCCGCC TGATTGCTTGGTGTG AHA_0585 619602 - 620873 + | serine transporter TERM 730 620924 - 620899 - T 100 -19.1 -4.42806 | opp_overlap 620899 CCAGCCGCAAATAAA GAGAGGCGACC CTGG GGTCGCCTCTC TTGTATCGGTCCGGT TERM 731 620899 - 620924 + T 100 -19.1 -3.52102 | opp_overlap 620899 CCAGCCGCAAATAAA GAGAGGCGACC CTGG GGTCGCCTCTC TTGTATCGGTCCGGT AHA_0586 621285 - 620947 - | protein CsaA TERM 732 621359 - 621385 + r 71 -6.4 -4.25104 | opp_overlap 621339 621359 GCCGTCTTCGGCAAA CGGCCGCCCG GTTACGG CAAGCGGCCG TTTTGCTGGCGCCAG TERM 733 621385 - 621359 - R 74 -10.8 -3.53012 | opp_overlap 621359, overlap 621339 GCCGTCTTCGGCAAA CGGCCGCCCG GTTACGG CAAGCGGCCG TTTTGCTGGCGCCAG AHA_0587 622122 - 621370 - | AraC family transcriptional regulator metJ 622481 - 622158 - | transcriptional repressor protein MetJ metB 622690 - 623853 + | O-succinylhomoserine (thiol)-lyase TERM 734 624674 - 624618 - g 71 -11.3 -3.53012 | overlap 624621 CCGCGCCGGGTGAAA GAAGCGCGCCTGCTGGAGCGCCTGAGC CTC GCCGAAGCGAACGAGCTGGCCCGCCTC GGCTCCTCGGTATTG TERM 735 624671 - 624621 - g 74 -9.4 -3.90744 | overlap 624618 CGCCGGGTGAAAGAA GCGCGCCTGCTGGAGCGCCTGAGC CTC GCCGAAGCGAACGAGCTGGCCCGC CTCGGCTCCTCGGTA metL 623853 - 626321 + | bifunctional aspartate kinase II/homoserine dehydrogenase II TERM 736 626364 - 626346 - T 100 -16 -3.64822 | opp_overlap 626346 AGTCGTTCAGTCAAA GAGGCGCC AGT GGCGCCTC TTTTTATTGTTTAGC TERM 737 626346 - 626364 + T 100 -16 -5.38549 | opp_overlap 626346 AGTCGTTCAGTCAAA GAGGCGCC AGT GGCGCCTC TTTTTATTGTTTAGC TERM 738 626946 - 626917 - T 100 -20.9 -2.87132 | opp_overlap 626920 626924, overlap 626924 CGTGCCCTGTAGATA TGACAAAGGGCGC CGAG GCGCCCTTTGTCA TTGAGGGGAGCTTGA TERM 739 626920 - 626943 + T 90 -16.8 -2.71011 | opp_overlap 626917 626924, overlap 626924 GCCCTGTAGATATGA CAAAGGGCGC CGAG GCGCCCTTTG TCATTGAGGGGAGCT TERM 740 626939 - 626924 - T 90 -11.8 -4.04318 | opp_overlap 626924 626920, overlap 626917 TGTAGATATGACAAA GGGCGC CGAG GCGCCC TTTGTCATTGAGGGG TERM 741 626924 - 626939 + T 90 -11.8 -4.05446 | opp_overlap 626917 626924, overlap 626920 TGTAGATATGACAAA GGGCGC CGAG GCGCCC TTTGTCATTGAGGGG ppc 629607 - 626974 - | phosphoenolpyruvate carboxylase argE 630968 - 629823 - | acetylornithine deacetylase argC 631237 - 632244 + | N-acetyl-gamma-glutamyl-phosphate reductase argB 632268 - 633047 + | acetylglutamate kinase TERM 742 633948 - 633933 - gf 71 -5.4 -4.43844 | GGACGAGGCAGAAAA CCGGAT GCAT ATCCAG AACGCCGTACTGCTG argF-1 632968 - 633984 + | ornithine carbamoyltransferase argG 634039 - 635274 + | argininosuccinate synthase TERM 743 635303 - 635321 + F 93 -16 -3.07816 | overlap 635305 CCCGTTGATTCCGTT GAGGGGGC ATG GCCCCCTC TTCCATAGGTCGAGG TERM 744 635305 - 635319 + F 81 -12.8 -3.09878 | overlap 635303 CGTTGATTCCGTTGA GGGGGC ATG GCCCCC TCTTCCATAGGTCGA argH 635484 - 636869 + | argininosuccinate lyase TERM 745 636900 - 636927 + T 74 -11.4 -3.27525 | opp_overlap 636905, overlap 636905 ATTAGAATAAGAACA AAAAACGGCAAC CGAT GTTGCCGTTTTA TTCAATTTACCGACA TERM 746 636905 - 636922 + T 100 -11.3 -4.75309 | opp_overlap 636905, overlap 636900 AATAAGAACAAAAAA CGGCAAC CGAT GTTGCCG TTTTATTCAATTTAC TERM 747 636922 - 636905 - T 100 -11.3 -5.70522 | opp_overlap 636900 636905 AATAAGAACAAAAAA CGGCAAC CGAT GTTGCCG TTTTATTCAATTTAC AHA_0598 637547 - 636990 - | hypothetical protein TERM 748 637105 - 637115 + g 100 -5.4 -6.23545 | ATGAGATAATCAACG GAGA CCT TCTC TTTTTTTTCTTTCAG TERM 749 637564 - 637550 - R 91 -10 -4.54449 | opp_overlap 637550 637552, overlap 637552 ATATGGCATACAAAA GCTCAG CTG CTGAGC TGATTCCTTTTGCAT TERM 750 638254 - 638276 + r 77 -7.8 -4.3534 | opp_overlap 638257, overlap 638262 TGGTCTCTAACGCAG TAACCTGATT CTT AAGCAGGTTA TTTTCCTGCTTGAGC TERM 751 638398 - 638385 - R 70 -3.1 -4.76478 | overlap 638391 GAAAAGAAATTAAAA GACAC ATTA GTATC TAAAAATAGTTTTTA AHA_0599 638906 - 638445 - | hypothetical protein AHA_0600 639379 - 639107 - | hypothetical protein AHA_0601 639769 - 639428 - | integral membrane protein AHA_0602 640356 - 639766 - | maltose O-acetyltransferase AHA_0603 641699 - 640437 - | MgtC/SapB transporter AHA_0604 641909 - 642910 + | sulfate-binding protein AHA_0605 642967 - 643542 + | hypothetical protein TERM 752 643652 - 643675 + F 100 -11.2 -5.81622 | GACGCTCCATTTTTA GGTCTTTTAT TTAT ATAAAAGACC TTTTTTTCATTTTAT cysT 643795 - 644661 + | sulfate/thiosulfate ABC transporter, permease protein CysT cysW 644658 - 645554 + | sulfate/thiosulfate ABC transporter, permease protein CysW cysA 645577 - 646644 + | sulfate/thiosulfate ABC transporter, ATP-binding protein TERM 753 646797 - 646773 - f 80 -9.2 -4.11048 | gap 1 ACAAGATAACAACAA GGCGG-CGGGG AAGG CCCCGACCGGC CGGTCAGCGCAGGAG AHA_0609 646821 - 647768 + | transcriptional regulator CysB-like protein TERM 754 647783 - 647813 + T 100 -18.4 -3.25719 | opp_overlap 647783 647788, overlap 647788 AGGTGGTGCATCAGA GAAAACGGGGAGCC AGT GGCTCCCCGTTTTG TTGATGGTGTCATGC TERM 755 647813 - 647783 - T 95 -18.4 -2.78463 | opp_overlap 647783 647788, overlap 647788 AGGTGGTGCATCAGA GAAAACGGGGAGCC AGT GGCTCCCCGTTTTG TTGATGGTGTCATGC TERM 756 647788 - 647808 + T 100 -18.3 -4.74215 | opp_overlap 647783 647788, overlap 647783 GTGCATCAGAGAAAA CGGGGAGCC AGT GGCTCCCCG TTTTGTTGATGGTGT TERM 757 647808 - 647788 - T 100 -18.3 -4.57353 | opp_overlap 647788 647783, overlap 647783 GTGCATCAGAGAAAA CGGGGAGCC AGT GGCTCCCCG TTTTGTTGATGGTGT AHA_0610 649325 - 647841 - | N-acetylglucosamine-binding protein A TERM 758 649515 - 649532 + r 74 -4.2 -4.68994 | CTCATCGGAGTAGAG CAAACA CTTAAC TGTTTG TTTTTAAATGGTGGT TERM 759 649657 - 649623 - R 100 -31.6 -3.39895 | TTTTTCATCAATGAA GCACGCCCCCGTCAGC CGG GCTGACGGGGGCGTGC GCTGCGACAGGGTAG AHA_0611 651376 - 649679 - | methyl-accepting chemotaxis protein TERM 760 651407 - 651440 + H 72 -2.3 -4.90079 | overlap 651406 651401 651410 651410 651413 TTTCCCGTGCGGGTC TGGTGGTGGCCAGTC CGTT GGCTGGCCCTGATTA TTTTGTTATTAACAT AHA_0612 651672 - 653519 + | oligoendopeptidase F TERM 761 653548 - 653573 + F 100 -19.1 -4.25104 | GAACATGCGTTATGT CAGACCCCTGC CGCG GCAGGGGTCTG TTTTCATGGGAAGGA TERM 762 653854 - 653835 - g 71 -10.7 -3.40403 | opp_overlap 653804 GCGGGCCTATCAGAA TGCCCGC TATCAG GCGGGCA GCATCCTCTTCTCGG AHA_0613 653596 - 654387 + | hypothetical protein AHA_0614 656596 - 654401 - | hypothetical protein AHA_0615 656878 - 657588 + | hypothetical protein AHA_0616 657609 - 658952 + | hypothetical protein TERM 763 658955 - 658993 + T 100 -30.5 -2.87132 | opp_overlap 658958 658961, overlap 658958 658961 GCAGCCGGCCTGATG CAACAAGGGCGCCCCGC AACAG GCGGGGCGCCCTTGTTG TCTGTCAGAGGAGCC TERM 764 658990 - 658958 - T 100 -26.4 -3.05384 | opp_overlap 658955 658958 658961, overlap 658961 GCCGGCCTGATGCAA CAAGGGCGCCCCGC AACAG GCGGGGCGCCCTTG TTGTCTGTCAGAGGA TERM 765 658958 - 658990 + T 100 -26.4 -3.58726 | opp_overlap 658958 658961, overlap 658955 658961 GCCGGCCTGATGCAA CAAGGGCGCCCCGC AACAG GCGGGGCGCCCTTG TTGTCTGTCAGAGGA TERM 766 658987 - 658961 - T 100 -22.3 -3.67597 | opp_overlap 658958 658955 658961, overlap 658958 GGCCTGATGCAACAA GGGCGCCCCGC AACAG GCGGGGCGCCC TTGTTGTCTGTCAGA TERM 767 658961 - 658987 + T 100 -22.3 -3.92996 | opp_overlap 658961 658958, overlap 658958 658955 GGCCTGATGCAACAA GGGCGCCCCGC AACAG GCGGGGCGCCC TTGTTGTCTGTCAGA TERM 768 659004 - 659031 + T 100 -18.4 -5.53991 | opp_overlap 659006 TGTTGTCTGTCAGAG GAGCCGACCGGG CAAG CCCGGCCGGCTC TTTTTTTGCTGGCTG TERM 769 659029 - 659006 - T 90 -17.4 -2.62184 | opp_overlap 659004 TTGTCTGTCAGAGGA GCCGACCGGG CAAG CCCGGCCGGC TCTTTTTTTGCTGGC AHA_0617 662220 - 659059 - | putative Tricorn protease homolog 1 AHA_0618 662465 - 662956 + | ErfK/YbiS/YcfS/YnhG family protein TERM 770 662964 - 662991 + F 100 -13.4 -5.02476 | AGCCCTGACTCTCTG CAGCGCGCCACC TCCG GGTGGCGTTCTG TTTTTTGGGCCCTCT AHA_0619 663105 - 663824 + | AzlC family protein TERM 771 664182 - 664214 + F 95 -15 -3.40071 | AGGCCCGTGATCTTG CATGGCGGATGTCT TCATT GGATATCCGCCATG TTGTGAATGTCACTT TERM 772 664249 - 664237 - f 77 -4.1 -5.0538 | opp_overlap 664239, overlap 664239 TGTCACTTCAAAAAA CACCT CTC AAGTG TGAGGATTTAGCTCC AHA_0620 664285 - 665811 + | hypothetical protein AHA_0621 665849 - 666700 + | pyruvate formate lyase activating enzyme TERM 773 666757 - 666785 + F 81 -3.8 -5.1675 | gap 1, overlap 666757 666760 CTACAAGGCAAGATT G-GACGGCGAACC GAGC GGTTCGGCGTGGC TTTTTTGCTGCCTGA AHA_0622 666893 - 667216 + | hypothetical protein AHA_0623 668182 - 667259 - | LysR family transcriptional regulator TERM 774 668233 - 668216 - R 100 -14.1 -5.38054 | overlap 668201 668197 CGGGACAAACAAAAA GCCCCGC CTGA GCGGGGC TTGCGGGGATCAGCC AHA_0624 669439 - 668243 - | aromatic amino acid aminotransferase AHA_0625 669884 - 669609 - | hypothetical protein TERM 775 669924 - 669909 - H 78 -6.2 -4.71426 | opp_overlap 669907 669909 669910 TCTCGATCAATAAAA CTATAC TGGG GTATAG TATATTGCATTGTCG AHA_0626 669956 - 670915 + | heavy metal transporter TERM 776 670969 - 670942 - T 93 -15.6 -3.01712 | opp_overlap 670943, overlap 670945 670949 TGGCCGCCCGCAACA GCAGGAAGGGGC CAAG GCCCCTTCCTGT TTTTCTGGCTCAGTG TERM 777 670943 - 670968 + T 100 -19.1 -4.88067 | opp_overlap 670942 670945 670949 GGCCGCCCGCAACAG CAGGAAGGGGC CAAG GCCCCTTCCTG TTTTTCTGGCTCAGT TERM 778 670966 - 670945 - T 86 -15.9 -2.73875 | opp_overlap 670943, overlap 670942 670949 CCGCCCGCAACAGCA GGAAGGGGC CAAG GCCCCTTCC TGTTTTTCTGGCTCA AHA_0627 671389 - 670979 - | hypothetical protein TERM 779 672039 - 671988 - g 76 -12.9 -3.40522 | gap 1 AGGCTGGGACGACAA GGTCAACACCCCGGCCGCGGCCGA CGGCT TCGGCC-CGAGCTGGGTGGTGCCC CTTAGCAAGCTGGAA AHA_0628 671620 - 675708 + | pullulanase TERM 780 675798 - 675823 + T 100 -16.1 -5.35815 | opp_overlap 675798 GAGAGAGTAAGCAAA GCGCGACTGCC GACC GGCAGCCGCGC TTTTTCTTTGCTGTG TERM 781 675823 - 675798 - T 100 -18.3 -3.99353 | opp_overlap 675798 GAGAGAGTAAGCAAA GCGCGACTGCC GACC GGCAGCCGCGC TTTTTCTTTGCTGTG TERM 782 675854 - 675876 + T 95 -14.8 -3.45118 | opp_overlap 675856, overlap 675856 GGCGAGGCAATAAAA AAGCCGCCCC GTT GGGGCGGCTG TTGGTTGTGCCGTCA TERM 783 675856 - 675874 + T 100 -17.4 -3.29593 | opp_overlap 675856, overlap 675854 CGAGGCAATAAAAAA GCCGCCCC GTT GGGGCGGC TGTTGGTTGTGCCGT TERM 784 675874 - 675856 - T 100 -17.4 -5.4833 | opp_overlap 675856 675854 CGAGGCAATAAAAAA GCCGCCCC GTT GGGGCGGC TGTTGGTTGTGCCGT zntA 678399 - 675901 - | zinc/cadmium/mercury/lead-transporting ATPase TERM 785 678122 - 678110 - G 70 -10.5 -3.62046 | opp_overlap 678109 GGAGTGGCGCAACAA CCCCC TCT GGGGG GCTCTTCCCCCTCGG AHA_0630 678536 - 679036 + | thiol peroxidase TERM 786 679082 - 679056 - T 100 -25.2 -3.83568 | opp_overlap 679056 GCAGACTGACAACAA TCCCGCCGGGGC ATG GCCCCGGCGGGA TTTTTTTATGGAACA TERM 787 679056 - 679082 + T 100 -25.2 -5.60993 | opp_overlap 679056 GCAGACTGACAACAA TCCCGCCGGGGC ATG GCCCCGGCGGGA TTTTTTTATGGAACA AHA_0631 679917 - 679099 - | hypothetical protein AHA_0632 680086 - 681306 + | DEAD-box ATP dependent DNA helicase TERM 788 681528 - 681509 - g 73 -12.8 -3.21099 | CGGGGTCAGGATCAA CGGCAGCC TGCT GGCCGCCG GCAAGCAGGCGGATA AHA_0633 681402 - 682895 + | hypothetical protein TERM 789 682913 - 682928 + T 100 -11.8 -5.18726 | opp_overlap 682908 GCGGGAAAATGCGAA GGGCCC TGAC GGGCCC TTTTTCTTGTGGAGA AHA_0634 683757 - 682969 - | hypothetical protein AHA_0635 684869 - 683754 - | endonuclease/exonuclease/phosphatase family protein TERM 790 685246 - 685267 + r 100 -17.3 -3.29511 | CAAACTGGGTGAAGC GGGCGTGCC GGGC GGCACGCCC TTGTAAGGCGGTCAG AHA_0636 686838 - 685279 - | aerotaxis receptor Aer TERM 791 686576 - 686590 + g 78 -7 -4.56597 | ACCCAGTAGAACTTG CCGCTC TTG GCGCGG TTTTTCACCAGCCCC AHA_0637 687910 - 687080 - | CAAX amino protease TERM 792 688049 - 688033 - R 100 -10.1 -5.60993 | opp_overlap 688033 GCGGCCATAAAAAAA CCGGAGC TGG ACTCCGG TTTTGGCAAGGGTGA TERM 793 688033 - 688049 + r 80 -9.4 -4.08216 | opp_overlap 688033 GCGGCCATAAAAAAA CCGGAG CTGGA CTCCGG TTTTGGCAAGGGTGA AHA_0638 688364 - 688074 - | hypothetical protein TERM 794 688294 - 688304 + g 81 -2.4 -5.2166 | overlap 688294 TTGCCTTTCTTCTTG GCAG GGG CGGC TTTTTTCGGTTGTTC AHA_0639 688802 - 688428 - | hypothetical protein TERM 795 689688 - 689678 - g 73 -8.2 -4.08216 | GCACCTGCTGGAAAA CCCG GAG CGGG ACAACCTGGTGGCCA AHA_0640 689124 - 690239 + | carbohydrate diacid regulator AHA_0641 690359 - 691621 + | gluconate:H+ symporter (GntP) family protein TERM 796 691776 - 691808 + G 72 -11.9 -3.38291 | opp_overlap 691773 GCGGCGAAGGGACGG TGCAGTCCCTGGTGG ACG CCACCGGTGGCCGCA TTCTGCCCTTCTACG TERM 797 692269 - 692218 - g 77 -13.6 -3.31144 | overlap 692237 692266 CTGCGACGTGGACAA CCCGCTGTGCGGACCGAAAGGGGC CTCC GCCGTGTTCGGTCCGCAGAAGGGG GCGACCCCCGAGATG AHA_0642 691631 - 692764 + | glycerate kinase 2 TERM 798 692854 - 692871 + F 100 -11.3 -5.33848 | TGCCCGAAACACCTT GCCGATC AGAT GATCGGC TTTTTTCATTATCCT AHA_0643 692975 - 693538 + | hypothetical protein AHA_0644 693601 - 694134 + | glutathione peroxidase AHA_0645 694196 - 695152 + | LysR family transcriptional regulator AHA_0646 695335 - 696531 + | nucleoside permease TERM 799 696563 - 696578 + T 100 -11.8 -5.25803 | CACCTTCCGGTCAGA GCCCGC TTCG GCGGGC TTTTTTGTGGCCGTT TERM 800 696625 - 696609 - T 100 -13.7 -5.75342 | TGCCGGCAAAAAAAA GCGCCTC AGG GAGGCGC GGGGAAAAGACAGAT AHA_0647 697288 - 696794 - | methylated-DNA--protein-cysteine methyltransferase AHA_0648 697738 - 697322 - | peptidyl-tRNA hydrolase domain-containing protein TERM 801 697416 - 697447 + g 76 -8.6 -4.1552 | gap 1 CTGCGGGTCGGCTTG GTGGCGTGGCGGGCC TTG GGGC-GCCAGGCCGC TTTCTTCAGCAGCTC AHA_0649 697940 - 698278 + | nitrogen regulatory protein P-II TERM 802 698332 - 698359 + F 100 -15.6 -4.41348 | opp_overlap 698343 GATTGACTCCATGGT GGGGCCAGATAG GATT CTATCCGGCCCC TTTGTTTGAACAGGG TERM 803 698953 - 698940 - g 77 -2.3 -5.01042 | overlap 698941 AATTCAAAGGAAAAA TCTGC ACCC GCAGC GGCAAGCATGAGTAC AHA_0650 698486 - 699493 + | iron binding protein FbpA TERM 804 699518 - 699498 - f 89 -16.9 -2.53263 | opp_overlap 699494 TCGACTTGTAATTCA GATGGGGCC AAG GGCCCCATC AACCTCTGTGGTCTC TERM 805 699555 - 699586 + G 81 -13.6 -3.59315 | overlap 699556 699578 699582 AATTTTGGATGGATT ACCGGCAGCTGGGC CAGC GCCCTGCTGCTGGC TTTGCCGGTGCTTGC TERM 806 699556 - 699585 + G 84 -17.1 -2.75268 | overlap 699555 699578 699582 ATTTTGGATGGATTA CCGGCAGCTGGGC CAGC GCCCTGCTGCTGG CTTTGCCGGTGCTTG fbpB 699534 - 701159 + | iron(III) ABC transporter, permease protein TERM 807 701517 - 701531 + G 73 -11.4 -3.59979 | opp_overlap 701526 CCCCACCTGACGGTG GCCGAC AAT GTCGGC TTTGGCCTGACCAAG AHA_0652 701229 - 702263 + | iron(III) ABC transporter, ATP-binding protein AHA_0653 702367 - 703272 + | TyrA protein TERM 808 703300 - 703317 + T 100 -12.7 -4.43272 | opp_overlap 703300 TGCAGATAACAAAAA TCCCGGC CTTG GCCGGGA TTTTGCGTTTTGGCT TERM 809 703317 - 703300 - T 100 -12.7 -5.24796 | opp_overlap 703300 TGCAGATAACAAAAA TCCCGGC CTTG GCCGGGA TTTTGCGTTTTGGCT argR 703829 - 703359 - | arginine repressor TERM 810 704081 - 704061 - g 74 -5.3 -4.66163 | overlap 704062 704063 704072 ATCGGTATCGAAAAA TCCTGGCAC AAG GTGCCGGTA CTGCAACAGGTCAGC AHA_0655 704031 - 704771 + | arginine ABC transporter, ATP-binding protein AHA_0656 704797 - 705534 + | arginine ABC transporter, periplasmic arginine-binding protein ArtI AHA_0657 705538 - 706188 + | arginine ABC transporter, permease protein ArtQ artM 706191 - 706853 + | arginine transporter permease subunit ArtM TERM 811 706876 - 706915 + F 100 -10.8 -5.22039 | gap 1, opp_overlap 706876, overlap 706879 706879 706879 AGATCTACCTATTAA TGGTGAGGGGAAGTGCAGG AAA TCTGTGCTTCCCCTC-CAA TTTTTTGCATTTCCC TERM 812 706879 - 706934 + F 86 -6.9 -5.06414 | opp_overlap 706876, overlap 706879 706879 706876 TCTACCTATTAATGG TGAGGGGAAGTGCAGGAAATCTGTG CTTCCC CTCCAATTTTTTGCATTTCCCCCCA TTTTTATTCGCCGCC TERM 813 706879 - 706914 + F 83 -12 -3.72139 | gap 1, opp_overlap 706876, overlap 706879 706876 706879 TCTACCTATTAATGG T-GAGGGGAAGTGCAGG AAA TCTGTGCTTCCCCTCCA ATTTTTTGCATTTCC TERM 814 706879 - 706913 + F 79 -13.6 -2.82199 | opp_overlap 706876, overlap 706876 706879 706879 TCTACCTATTAATGG TGAGGGGAAGTGCAGG AAA TCTGTGCTTCCCCTCC AATTTTTTGCATTTC mdh 707075 - 708010 + | malate dehydrogenase TERM 815 708048 - 708031 - f 83 -12.7 -3.2794 | opp_overlap 708031 CCGGATGGACAGCAA GGGGAGC TTCG GCTCCCC TTTGTCGTTATGGTG TERM 816 708031 - 708048 + F 95 -12.7 -4.11281 | opp_overlap 708031 CCGGATGGACAGCAA GGGGAGC TTCG GCTCCCC TTTGTCGTTATGGTG AHA_0660 708135 - 709046 + | sodium-type flagellar motor component TERM 817 709084 - 709057 - T 100 -12 -5.47821 | overlap 709058 ACTGAGCCAAAAAAA TGACCCACGGAT CTGC ATCCGTGGGCCG GGAGGAGCCGGCCGC TERM 818 709083 - 709058 - T 100 -15.5 -3.87608 | overlap 709057 CTGAGCCAAAAAAAT GACCCACGGAT CTGC ATCCGTGGGCC GGGAGGAGCCGGCCG AHA_0661 710342 - 709149 - | flavohemoprotein TERM 819 710201 - 710172 - G 81 -15.8 -3.06796 | gap 1, overlap 710174 TGCCACCGCATTGAA CAGCGCCAGCGGC TGGCC GCCGCTG-CGCTG GTGCGCCAGGTTGAA TERM 820 710199 - 710174 - G 71 -12.6 -3.09327 | gap 1, overlap 710172 CCACCGCATTGAACA GCGCCAGCGGC TGGCC GCCGCTG-CGC TGGTGCGCCAGGTTG TERM 821 710390 - 710400 + H 73 -5.4 -4.53602 | opp_overlap 710364 TCACTTAATAAGCTG CATC CTA GATG TTTATTTGATCTGAA AHA_0662 710453 - 710920 + | Rrf2 family protein TERM 822 710955 - 710925 - T 100 -17 -3.19091 | opp_overlap 710932, overlap 710932 AGAGCGAGTGAGCAA GCAAAAAGGCTGCC AGT GGCAGCCTTTTTTC AATCTTCAAAGCCAG TERM 823 710932 - 710948 + T 100 -13.7 -5.1615 | opp_overlap 710925 710932 GTGAGCAAGCAAAAA GGCTGCC AGT GGCAGCC TTTTTTCAATCTTCA TERM 824 710948 - 710932 - T 100 -13.7 -4.90266 | opp_overlap 710932, overlap 710925 GTGAGCAAGCAAAAA GGCTGCC AGT GGCAGCC TTTTTTCAATCTTCA AHA_0663 712234 - 710954 - | putative transporter AHA_0664 713066 - 712275 - | putative cytochrome C assembly protein ffh 713341 - 714717 + | signal recognition particle protein TERM 825 714744 - 714764 + F 100 -14.7 -4.25104 | overlap 714757 TCATGCACACGTCAA GGGCTCACC ATG GGTGGGCCC TTTTCATGGGGCCGC TERM 826 714854 - 714873 + F 73 -9.2 -3.83006 | opp_overlap 714853 CTTATTTTAAGCTAG GGTCCGCG TGTT TGCGGGCC TTGTTCATTAGATGT rpsP 714902 - 715150 + | ribosomal protein S16 rimM 715175 - 715696 + | 16S rRNA processing protein RimM TERM 827 715896 - 715866 - g 73 -8.2 -3.97947 | opp_overlap 715873 715874 TTTACCCACGACAAA CACCGTACGGTCGA TGA TCGTCCTTATGGTG GTGGGCCCGGCATGT trmD 715731 - 716480 + | tRNA (guanine-N1)-methyltransferase rplS 716513 - 716860 + | 50S ribosomal protein L19 TERM 828 716915 - 716933 + T 100 -16 -5.37043 | opp_overlap 716915 GACAGGTAGTGAAAA GGCTCGCC AAT GGCGAGCC TTTTTTGTATCCGCT TERM 829 716933 - 716915 - T 100 -16 -4.20531 | opp_overlap 716915 GACAGGTAGTGAAAA GGCTCGCC AAT GGCGAGCC TTTTTTGTATCCGCT AHA_0670 717293 - 716964 - | 1,4-alpha-glucan branching enzyme TERM 830 717323 - 717335 + r 77 -4.1 -5.01546 | opp_overlap 717323 CTGATTGCGAAGAAA TAGCT GCT GGCTA TTTTTATATCACTTT mutH 718050 - 717376 - | DNA mismatch repair protein TERM 831 718085 - 718109 + H 77 -4.9 -4.83615 | opp_overlap 718085 718086, overlap 718087 718088 GGATTATTCTAGCAA CTCTGATCCTC GCT GAGGATCGCTG TTTTTATAACCGATC AHA_0672 718784 - 719311 + | NUDIX family hydrolase ptsI-1 719326 - 721605 + | phosphoenolpyruvate-protein phosphotransferase lgt 721673 - 722497 + | prolipoprotein diacylglyceryl transferase thyA 722497 - 723291 + | thymidylate synthase TERM 832 723299 - 723315 + F 100 -10.8 -5.28176 | opp_overlap 723299 CCATCTGATGTGAAA GGCGCC CATGA GGCGCC TTTTTTATGCATAAA TERM 833 723315 - 723299 - f 77 -11.5 -3.60627 | opp_overlap 723299 CCATCTGATGTGAAA GGCGCCC ATG AGGCGCC TTTTTTATGCATAAA TERM 834 723403 - 723389 - f 73 -6.4 -4.4009 | overlap 723390 CCGTATGGGAGAAAA CCTGCT TAT AGCAGA CATGTTTGATTTTGC nhaA 723518 - 724708 + | Na+/H+ antiporter NhaA TERM 835 725180 - 725152 - g 71 -8.8 -3.82824 | gap 1, opp_overlap 725150 725152 GATGACTCAGAAGAA GGGC-TCCGTCAC GCAA GCGGCGGAAGCCC TCTTCTTGACCCCGC nhaR 725099 - 726031 + | transcriptional activator NhaR AHA_0678 726057 - 726383 + | nodulation protein NolR TERM 836 726410 - 726381 - T 80 -9.4 -4.21607 | opp_overlap 726388 726407, overlap 726388 TGCAGCGAACAGAAA TAAAAAACCGGC ACGAAG GCCGGTTTTTTT AGCTTTGTTCAGCGG TERM 837 726403 - 726388 - T 100 -7.5 -5.7827 | opp_overlap 726388, overlap 726381 AACAGAAATAAAAAA CCGGC ACGAAG GCCGG TTTTTTTAGCTTTGT TERM 838 726388 - 726403 + T 100 -7.5 -5.59564 | opp_overlap 726388 726381 AACAGAAATAAAAAA CCGGC ACGAAG GCCGG TTTTTTTAGCTTTGT rpsT 726697 - 726434 - | ribosomal protein S20 TERM 839 726464 - 726484 + g 71 -5.3 -4.52415 | overlap 726478 GATCTGGGCAGACAG GCGGCTCTT GTG ACGAGCAGC TTTGTTCTTGTGGAT TERM 840 726807 - 726793 - H 75 -7.1 -4.41616 | opp_overlap 726795 ATTTGTGCAAATAAA CACCG CCCCC CGGTG GTGTGTCAGATGGGA mviN 726889 - 728454 + | integral membrane protein MviN TERM 841 728745 - 728719 - g 100 -10 -4.72272 | opp_overlap 728738 CGCCTGCAGGAAAAA GCAGCCCAGCTG GGC CTGCCGGCCTGC GTCATGCTGTTTGAA TERM 842 728939 - 728969 + G 74 -4.6 -4.54727 | overlap 728934 TGCTGGTGGAGAAAC TCGGCGTGCACTAT CTG GTGGTGGGCGACGA TTTTCGTTTCGGCAA ribF 728596 - 729570 + | riboflavin biosynthesis protein RibF ileS 729570 - 732431 + | isoleucyl-tRNA synthetase TERM 843 732547 - 732565 + G 75 -12.4 -3.63991 | GCCATTTGGCTACCC GGGGGTGG AGA TCACCCCC TTCTTCAACCTGGTC lspA 732431 - 732934 + | signal peptidase II fkpB 732931 - 733383 + | FKBP-type peptidyl-prolyl cis-trans isomerase FkpB ispH 733383 - 734318 + | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase TERM 844 734358 - 734377 + F 100 -13.6 -4.7254 | GCCATGAGTGCCTGA GCCACCTC CTGT GAGGTGGC TTTTTCATGGGCGAT AHA_0686 734580 - 735083 + | putative type IV pilin pilV 735080 - 735493 + | type IV pilus modification protein PilV AHA_0688 735490 - 736584 + | putative type IV pilin AHA_0689 736595 - 737071 + | hypothetical protein TERM 845 737411 - 737389 - g 78 -7 -4.58786 | overlap 737401 AGCAACAACAACAAA CTCTACTACA ACC CGCAGCAGAG CTATCGGCCCTGGGC TERM 846 737908 - 737925 + G 77 -2.5 -5.0133 | GTAGCGCCTTTTTCC GGCACCG ATCG CAGCGCC TTTTTTAGCGACCTA AHA_0690 737083 - 740436 + | type IV pilus biogenesis protein AHA_0691 740445 - 740846 + | type IV pilin AHA_0692 741237 - 740851 - | type IV pilin AHA_0693 741332 - 741868 + | putative type IV pilin AHA_0694 741859 - 742482 + | putative type IV pilin AHA_0695 742484 - 743581 + | hypothetical protein TERM 847 744261 - 744251 - g 71 -8.2 -3.92075 | ACGGTGACTTATAAA CCCG CAG CGGG TGGCAACACCCAGCA AHA_0696 743594 - 745693 + | putative type IV pilin TERM 848 745700 - 745720 + F 100 -18.3 -5.04733 | ACCCCTTGAGCCTTG GGCGCTGGC ACA GCCAGCGCC TTTTCTTTATCATTC TERM 849 746610 - 746600 - g 72 -2.4 -4.7373 | CTATGTCACCAAAAA CGGG TTC CACG GCGCCGTGCTGGGCC nadE 745767 - 747389 + | NAD synthetase glnB 747399 - 747737 + | nitrogen regulatory protein P-II 1 AHA_0699 747748 - 748392 + | transcriptional regulatory protein luxS 748411 - 748920 + | S-ribosylhomocysteinase TERM 850 748973 - 748936 - T 100 -16.5 -3.66178 | gap 1, opp_overlap 748945, overlap 748945 TCCCGGAATGGCAAA CATG-AAAAAGGCCGGTC AAT GACCGGCCTTTTTGCGTG CTGACGGAATCAGGA TERM 851 748945 - 748963 + T 100 -16 -4.68593 | opp_overlap 748936 748945 GGCAAACATGAAAAA GGCCGGTC AAT GACCGGCC TTTTTGCGTGCTGAC TERM 852 748963 - 748945 - T 100 -16 -4.93696 | opp_overlap 748945, overlap 748936 GGCAAACATGAAAAA GGCCGGTC AAT GACCGGCC TTTTTGCGTGCTGAC AHA_0701 749948 - 748983 - | GGDEF family protein TERM 853 749138 - 749155 + g 83 -4.9 -5.08824 | gap 1 TGCGCCGGCCCGATT TG-CGATC CAG GATCGACA TTTTTTCGATGGCCC TERM 854 752530 - 752510 - g 86 -5.3 -5.1675 | overlap 752498 752529 CGACCGAGCAAAAAA GCTCGCGAC AAG GCCAAGAGC ACTAAATGAGTACTG rnr 750140 - 752539 + | ribonuclease R TERM 855 752761 - 752736 - g 70 -10.4 -3.65046 | GGCGGAGGGTAACAA TCACCAGGGC ATCATG GCCCGGGTGA AAGAGGCGCCCAAGC TERM 856 752978 - 753001 + G 70 -10.2 -3.65046 | opp_overlap 752941 TGCGCAAGGTCGCCT GTGGCGCCGC CGAA GTGGTGCCGC TTATTCAGGTCACCA AHA_0703 752536 - 753285 + | RNA methyltransferase TERM 857 753335 - 753360 + G 78 -9.8 -4.07687 | gap 1, opp_overlap 753334 753337 GATCGGGTCACAGAT GAGCAGGAGGC CGCGC GCCTCCT-CTC TTTTGCCCGGCCGCT AHA_0704 753296 - 753862 + | cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase AHA_0705 753920 - 754369 + | acetyltransferase AHA_0706 754597 - 755448 + | drug/metabolite exporter family protein TERM 858 755499 - 755544 + F 71 -10.5 -3.19602 | gap 3, opp_overlap 755487 755484 755526, overlap 755484 755497 GCAGGCATCTTATGA GGCCGCTCTCTGTCATGGCCGG GCAAA CCGGCTATG-CTG-G-GCGGCC TGTTGCTATCGGAAC AHA_0707 755566 - 756402 + | drug/metabolite exporter (DME) family protein AHA_0708 757284 - 756436 - | hypothetical protein TERM 859 756883 - 756854 - G 70 -12.1 -3.14132 | TCTTTGCGCCAGTAA GGCATCAGCGCTC GGTT GAGCGCCAGTGCC GCCAGATGGCAGCCG TERM 860 757378 - 757335 - R 100 -16.8 -3.64599 | opp_overlap 757319, overlap 757314 757316 757317 757336 CCAGCATACGCCAAA GCGCAGGCCGGCTCATTAAC CTCG GTTAACAAGCCGGCCTGAGG AGGGGATGGCGGGCT TERM 861 757377 - 757336 - R 100 -20.3 -2.78438 | opp_overlap 757319, overlap 757314 757316 757317 757335 CAGCATACGCCAAAG CGCAGGCCGGCTCATTAAC CTCG GTTAACAAGCCGGCCTGAG GAGGGGATGGCGGGC mntH 758630 - 757392 - | manganese transport protein MntH rpsF 758853 - 759239 + | ribosomal protein S6 rpsR 759270 - 759500 + | ribosomal protein S18 rplI 759553 - 759999 + | ribosomal protein L9 TERM 862 760042 - 760025 - f 100 -14.1 -5.24129 | opp_overlap 760025 CTTTTGCAGAAAAAA CCCGCGC ACTT GCGCGGG TTTTTTATTTTCAGG TERM 863 760025 - 760042 + F 100 -14.1 -5.79595 | opp_overlap 760025 CTTTTGCAGAAAAAA CCCGCGC ACTT GCGCGGG TTTTTTATTTTCAGG TERM 864 760574 - 760591 + G 79 -8.3 -4.26188 | overlap 760585 TATCGTGGGGTTTGC CGCCCGC CACG GCGAGCG TTTTCGCTATGTGCC AHA_0713 760101 - 760841 + | ferredoxin--NADP reductase TERM 865 760875 - 760847 - T 100 -14 -4.04206 | gap 1, opp_overlap 760855, overlap 760848 760851 CTACTGGTAGAGAAA TGGACACAGGGGC CTCG GCCCCTGTGT-CA GGGTAACGGGGATGA TERM 866 760875 - 760848 - T 93 -15.6 -3.02202 | opp_overlap 760855, overlap 760847 760851 TACTGGTAGAGAAAT GGACACAGGGGC CTCG GCCCCTGTGTCA GGGTAACGGGGATGA TERM 867 760872 - 760851 - T 86 -15.9 -2.73529 | opp_overlap 760855, overlap 760847 760848 TGGTAGAGAAATGGA CACAGGGGC CTCG GCCCCTGTG TCAGGGTAACGGGGA AHA_0714 761211 - 760894 - | hypothetical protein AHA_0715 761574 - 762512 + | hypothetical protein TERM 868 762519 - 762536 + T 100 -12.7 -5.06816 | GGGAGTTGATCATCA GGCCACC GCAG GGTGGCC TTTTTATTGCCGCGT AHA_0716 762765 - 762562 - | hypothetical protein AHA_0717 762774 - 763751 + | quinone oxidoreductase AHA_0718 763748 - 764185 + | hypothetical protein AHA_0719 764205 - 767018 + | M16B family peptidase TERM 869 767065 - 767036 - f 93 -11.4 -4.38927 | gap 1, overlap 767038 GCGCTACATAATAAA GAGT-GCCGCCCC CCTGT GGGGCGGCCACAC ATGAGCCGTGAATAT TERM 870 767063 - 767038 - f 90 -12.6 -3.79864 | gap 1, overlap 767036 GCTACATAATAAAGA GT-GCCGCCCC CCTGT GGGGCGGCCAC ACATGAGCCGTGAAT gshA 767079 - 768668 + | glutamate--cysteine ligase TERM 871 768690 - 768707 + F 100 -12.7 -5.24531 | CCATTTCTGCTGCAA GCCGCTC TTCG GAGCGGC TTTTTTATGGGCGGT TERM 872 769193 - 769161 - g 71 -9.1 -3.71284 | overlap 769144 GGGTGATGAAGATAA CCCTGATCCCGACCC GCG GCATGGGGATCAAGG AGGTCAGAGCCGCCG AHA_0721 768923 - 770137 + | hypothetical protein TERM 873 770175 - 770159 - T 100 -10.1 -4.96106 | opp_overlap 770159, overlap 770153 GACAAACAGCAAAAA GCCGCTC TTG AAGCGGC TTTTTTATTTCCCTG TERM 874 770159 - 770175 + T 100 -9.4 -5.65927 | opp_overlap 770159 770153 GACAAACAGCAAAAA GCCGCT CTTGA AGCGGC TTTTTTATTTCCCTG AHA_0722 772010 - 770220 - | long-chain-fatty-acid--CoA ligase-like protein AHA_0723 772197 - 772742 + | hypothetical protein rimI 773217 - 772768 - | ribosomal-protein-alanine acetyltransferase TERM 875 773089 - 773060 - G 71 -8.5 -3.95073 | gap 1, overlap 773061 TCCGAGATGTAGAAA CCGGCCGGCTGGCC GTC GACCAGC-AGCAGG CCGTTGAGGTAGCGC AHA_0725 773947 - 775593 + | ATPase TERM 876 776553 - 776531 - g 70 -12 -3.18264 | CTGCTCAGCTACCAA TCGCGTGGCA CCC TGCCACGCCA GCGCATCATGCTGCG yieM 775781 - 777100 + | hypothetical protein AHA_0727 778114 - 777110 - | diguanylate cyclase/phosphodiesterase AHA_0728 778338 - 779258 + | TPR repeat-containing protein AHA_0729 779375 - 780184 + | GGDEF/response regulator receiver domain-containing protein TERM 877 780196 - 780227 + F 75 -6.4 -4.65895 | opp_overlap 780166, overlap 780198 GTAGGGGGCGCAGGC TCCCCTGCTCGCCT GCAA AGCCGGGCTGGGTA TTTTTCACTCGCGCG TERM 878 780198 - 780225 + F 76 -9 -3.94812 | opp_overlap 780166, overlap 780196 AGGGGGCGCAGGCTC CCCTGCTCGCCT GCAA AGCCGGGCTGGG TATTTTTCACTCGCG prfC 780442 - 782028 + | peptide chain release factor 3 TERM 879 782065 - 782084 + F 100 -15 -5.47218 | opp_overlap 782065 GACAAGATAAAAAAA GACCCCGC CCAG GCGGGGTC TTTTTTTGCATGGCG TERM 880 782084 - 782065 - f 100 -15 -5.84432 | opp_overlap 782065 GACAAGATAAAAAAA GACCCCGC CCAG GCGGGGTC TTTTTTTGCATGGCG AHA_0731 782197 - 782535 + | steroid delta-isomerase domain-containing protein AHA_0732 783096 - 782602 - | transcriptional regulatory protein AHA_0733 783159 - 783617 + | alkylhydroperoxidase AhpD core TERM 881 783659 - 783630 - T 89 -13.7 -3.65351 | opp_overlap 783635, overlap 783635 TGAGCGGCAGGCAAA CAAAAGGACGGCA TCGC TGCCGCCCTTTTA TCCTGAGCTGATCAC TERM 882 783654 - 783635 - T 100 -11.4 -4.90778 | opp_overlap 783635, overlap 783630 GGCAGGCAAACAAAA GGACGGCA TCGC TGCCGCCC TTTTATCCTGAGCTG TERM 883 783635 - 783654 + T 85 -9.2 -4.46926 | opp_overlap 783635 783630 GGCAGGCAAACAAAA GGACGGCA TCGC TGCCGCCC TTTTATCCTGAGCTG AHA_0734 784613 - 783675 - | MarR family transcriptional regulator TERM 884 784661 - 784675 + r 100 -5 -5.4833 | opp_overlap 784658 784661 CAATATAGCCAACTA GTTGTT ACT AGCAAC TTTTTTATTGGGTCA TERM 885 784754 - 784737 - R 100 -9.8 -5.28778 | overlap 784724 AGCAGGCACAAAAAA GGGCCC GGGAGG GGGCCC AAACATTGGAAACCC TERM 886 784784 - 784767 - R 76 -10.5 -3.695 | opp_overlap 784761 784782, overlap 784768 CCCAAACATTGGAAA CCCGCGC GAGG GCGCGGA TCCCATCCTTGGTCA TERM 887 784783 - 784768 - R 72 -11.8 -2.81218 | opp_overlap 784761 784782, overlap 784767 CCAAACATTGGAAAC CCGCGC GAGG GCGCGG ATCCCATCCTTGGTC xenB 785940 - 784819 - | xenobiotic reductase B TERM 888 786215 - 786195 - g 76 -8.1 -4.15044 | GCGTTTGGCAACAAA CGCGGCCTG CTG CTGGCGGCG GTCGATCACTATGTG AHA_0736 786045 - 786611 + | TetR family transcriptional regulator TERM 889 786617 - 786666 + T 100 -25.3 -2.78384 | opp_overlap 786627 786630, overlap 786627 786630 GCGGGCGTAATGCGC CGCCCATAAACAACCATGGCTCC CGCG GGAGCCATGGTTGTTTATGGGGA TGTCATACACCGCCG TERM 890 786627 - 786656 + T 100 -20.9 -3.88787 | opp_overlap 786627 786630, overlap 786617 786630 TGCGCCGCCCATAAA CAACCATGGCTCC CGCG GGAGCCATGGTTG TTTATGGGGATGTCA TERM 891 786656 - 786627 - T 100 -20.9 -3.85698 | opp_overlap 786627 786617 786630, overlap 786630 TGCGCCGCCCATAAA CAACCATGGCTCC CGCG GGAGCCATGGTTG TTTATGGGGATGTCA TERM 892 786653 - 786630 - T 100 -16.8 -4.06419 | opp_overlap 786627 786617 786630, overlap 786627 GCCGCCCATAAACAA CCATGGCTCC CGCG GGAGCCATGG TTGTTTATGGGGATG TERM 893 786630 - 786653 + T 100 -16.8 -4.07133 | opp_overlap 786630 786627, overlap 786627 786617 GCCGCCCATAAACAA CCATGGCTCC CGCG GGAGCCATGG TTGTTTATGGGGATG AHA_0737 787707 - 786751 - | LysR family transcriptional regulator AHA_0738 787858 - 788955 + | agmatine deiminase TERM 894 788979 - 789003 + F 72 -11.5 -3.13371 | opp_overlap 788984, overlap 788984 AAGAGTGTAGACATT CAAAACCCCAC GCC GTGGGGTTTTA TCTCTTGATGACGTG TERM 895 788984 - 788998 + F 100 -11.4 -4.6955 | opp_overlap 788984, overlap 788979 TGTAGACATTCAAAA CCCCAC GCC GTGGGG TTTTATCTCTTGATG TERM 896 788998 - 788984 - f 91 -11.4 -4.26188 | opp_overlap 788984 788979 TGTAGACATTCAAAA CCCCAC GCC GTGGGG TTTTATCTCTTGATG AHA_0739 789082 - 790785 + | amidase TERM 897 790862 - 790834 - f 79 -7.5 -4.48987 | opp_overlap 790839, overlap 790839 CGGTGATAACGAAAA CAAAACCACCC GCCATTT GGGTGGTTTTT TTATTTTCAGTGTAG TERM 898 790857 - 790839 - f 100 -7.4 -5.19998 | opp_overlap 790839, overlap 790834 ATAACGAAAACAAAA CCACCC GCCATTT GGGTGG TTTTTTTATTTTCAG TERM 899 790839 - 790857 + F 100 -8.1 -6.09196 | opp_overlap 790839 790834 ATAACGAAAACAAAA CCACCCG CCATT TGGGTGG TTTTTTTATTTTCAG AHA_0740 792493 - 793254 + | beta-lactamase TERM 900 793325 - 793371 + F 70 -9.3 -3.74693 | gap 2, opp_overlap 793304, overlap 793311 793365 CGGGCGTTTCTGGCA GGGGGACGCCCTTG--CCTCCAG TTT CGGGCTGTTCAAGGGCGGCCCCC TTTCATAAGATGGGC AHA_0741 793418 - 794710 + | hypothetical protein TERM 901 794754 - 794741 - T 100 -9.5 -6.20267 | opp_overlap 794741 CGAAAAACAAAAAAA CGCCC GACT GGGCG TTTTTTATTGGCGGT TERM 902 794741 - 794754 + T 100 -9.5 -5.45652 | opp_overlap 794741 CGAAAAACAAAAAAA CGCCC GACT GGGCG TTTTTTATTGGCGGT AHA_0742 796031 - 794781 - | putative ATP-dependent RNA helicase RhlE AHA_0743 797003 - 796134 - | regulatory protein, LysR:LysR, substrate-binding TERM 903 797686 - 797706 + G 71 -12.5 -3.03159 | CCCTCTCCTTCACCG CCGGGCTGG CGC TCGGCCCGG TGTTCAGCGGGTTGG TERM 904 797886 - 797899 + G 77 -3.7 -4.83246 | GGGGAGGGGCTCAAG GCCAC CGGG GCGGC TTTCTTTATTTGTGC AHA_0744 797223 - 798455 + | valanimycin resistance, putative AHA_0745 798917 - 798462 - | hypothetical protein AHA_0746 799088 - 799996 + | hypothetical protein TERM 905 800041 - 800014 - T 76 -12 -3.14211 | opp_overlap 800020, overlap 800020 AGGGGCTTTCATCAA CGACAAGGGCGC TGCG GCGCCCTTTTCA TTGCCGGTCCAGCTG TERM 906 800035 - 800020 - T 81 -11.8 -3.54029 | opp_overlap 800020, overlap 800014 TTTCATCAACGACAA GGGCGC TGCG GCGCCC TTTTCATTGCCGGTC TERM 907 800020 - 800035 + T 95 -11.8 -4.41494 | opp_overlap 800020 800014 TTTCATCAACGACAA GGGCGC TGCG GCGCCC TTTTCATTGCCGGTC AHA_0747 800356 - 800063 - | hypothetical protein TERM 908 800476 - 800459 - R 95 -14.1 -3.30771 | opp_overlap 800459 TTACAGTCGTGACAA CGGGCGC CTGG GCGCCCG TTGTGGATCCTGGCA TERM 909 800459 - 800476 + r 95 -14.1 -3.37796 | opp_overlap 800459 TTACAGTCGTGACAA CGGGCGC CTGG GCGCCCG TTGTGGATCCTGGCA AHA_0748 801062 - 800502 - | carbonic anhydrase TERM 910 801898 - 801886 - g 71 -6.2 -4.24948 | overlap 801879 CGACGAGATGCAAAA GCGC GAGTT GCGC TCCTGCGGTCAGCCG AHA_0749 801320 - 801940 + | ribonuclease T2 family protein AHA_0750 802009 - 802293 + | hypothetical protein AHA_0751 802290 - 803348 + | 2-nitropropane dioxygenase family oxidoreductase TERM 911 805722 - 805685 - f 77 -11.5 -3.61398 | opp_overlap 805690, overlap 805688 TCTTCTTGCTAACAA GAATGCAGAGTTAAGAA CTGA TTCTTAACTCTGTTTTC TTCAGCCTTGTGCTG TERM 912 805719 - 805688 - f 71 -7.4 -3.9461 | opp_overlap 805690, overlap 805685 TCTTGCTAACAAGAA TGCAGAGTTAAGAA CTGA TTCTTAACTCTGTT TTCTTCAGCCTTGTG TERM 913 805690 - 805717 + F 100 -14.4 -4.65747 | opp_overlap 805688 805685 TTGCTAACAAGAATG CAGAGTTAAGAA CTGA TTCTTAACTCTG TTTTCTTCAGCCTTG TERM 914 805845 - 805831 - f 74 -7.2 -4.07687 | opp_overlap 805821 805825 805831 ACTTCTTGGCGAAAA CCAAAT TTT ATTTGG TCCTTGTTGTACAGC TERM 915 805893 - 805863 - f 71 -10.4 -3.25823 | opp_overlap 805869, overlap 805866 CTTGTTGTACAGCAA CAAGCTGCGTCGGT TTC ACCGACACTTCTTG GGGTTGTATGGTTAA TERM 916 805869 - 805887 + F 70 -8.8 -3.70081 | opp_overlap 805866 805863 GTACAGCAACAAGCT GCGTCGGT TTC ACCGACAC TTCTTGGGGTTGTAT TERM 917 806391 - 806379 - f 84 -9.1 -4.2354 | GAAAGGCGAAAAGAA CCCCT GTG AGGGG AGTGAAATAGAACCT TERM 918 809210 - 809231 + F 100 -15.9 -4.85129 | opp_overlap 809210, overlap 809217 GCCACTAATTTGAAA GGCCTTCCC AGAT GGGAAGGCC TTTTTGCTATCTGGT TERM 919 809231 - 809210 - f 100 -15.9 -3.67976 | opp_overlap 809210 809217 GCCACTAATTTGAAA GGCCTTCCC AGAT GGGAAGGCC TTTTTGCTATCTGGT TERM 920 809272 - 809329 + G 71 -11.3 -3.50853 | gap 1, opp_overlap 809273, overlap 809273 GAAATAAGGAAACAA AGGACAACAGACAGGGCTGCGACTTGCC ACT GGCAACT-GAGTCCCTGTCAGTTGTCCC TTGTGCTTGAGCCGG TERM 921 809273 - 809328 + G 75 -14.8 -2.70298 | gap 1, opp_overlap 809273, overlap 809272 AAATAAGGAAACAAA GGACAACAGACAGGGCTGCGACTTGCC ACT GGCAACT-GAGTCCCTGTCAGTTGTCC CTTGTGCTTGAGCCG TERM 922 809328 - 809273 - g 100 -14.3 -4.63748 | gap 3, opp_overlap 809272 809273 AAATAAGGAAACAAA GGACAACAGACAGGG-CTGCGACTTGCC ACT GGCAACT-G-AGTCCCTGTCAGTTGTCC CTTGTGCTTGAGCCG TERM 923 809386 - 809405 + G 100 -13.6 -5.72207 | opp_overlap 809386 GCCACTACTCAAGAA GCCCAGTC TAGC GACTGGGC TTTTTTTCGTTTCAC TERM 924 809405 - 809386 - g 84 -13.6 -3.69395 | opp_overlap 809386 GCCACTACTCAAGAA GCCCAGTC TAGC GACTGGGC TTTTTTTCGTTTCAC AHA_0757 809221 - 810054 + | MutT/nudix family protein AHA_0758 811306 - 810083 - | two-component system sensor kinase AHA_0759 812043 - 811363 - | transcriptional regulatory protein CpxR TERM 925 812505 - 812459 - g 100 -26 -2.74012 | overlap 812501 GGACGAGGTGAAGCA GGGCGATCTGCTGGTCGAGATC GAC GATCTCACCCAGCAGAACGCCC TCAAGGATGCCGAGG AHA_0760 812205 - 813365 + | macrolide-specific efflux protein MacA AHA_0761 813368 - 815314 + | macrolide-specific ABC-type efflux carrier TERM 926 815474 - 815496 + T 100 -13.4 -4.91109 | overlap 815477 CTCTGCGCGGGTTTT CAACCGGGCC CCT GGCCCGGTTC TTTTTCTCATGCGAA TERM 927 815477 - 815493 + T 100 -15.1 -4.56153 | overlap 815474 TGCGCGGGTTTTCAA CCGGGCC CCT GGCCCGG TTCTTTTTCTCATGC TERM 928 815538 - 815517 - T 100 -6.5 -5.44119 | gap 1 CTCATGCGAAAAAAA GGCGCCACCC GAG GGG-AACGCC TGAAAGGTCAAACCT AHA_0762 816455 - 815619 - | glutamine/glutamate ABC transporter, periplasmic glutamine/glutamate-binding protein AHA_0763 817213 - 816452 - | ABC transporter AHA_0764 817872 - 817210 - | glutamine transport system permease protein GlnP AHA_0765 818612 - 817947 - | glutamine/glutamate ABC transporter, permease protein AHA_0766 819820 - 818609 - | threonine synthase TERM 929 821362 - 821335 - g 74 -4.8 -4.65895 | gap 1, overlap 821336 821337 GGTTCGAGCCAAAAA GCGGCGCCATCAG CCT CT-ATCGCGCCTC AGCGGCGCCGTTCAA AHA_0767 820056 - 822203 + | prolyl endopeptidase TERM 930 822241 - 822256 + F 95 -11.8 -4.4078 | CATCCACTATCATCA GGGCCC TGCG GGGCCC TTTTCATTGCCGCGC TERM 931 823644 - 823627 - g 89 -12.7 -4.15044 | GCCGGCCGGAACAAA GGCGCAG ACCG CTGCGCC CGCCGCCAAGGCGCT AHA_0768 822407 - 824566 + | AsmA protein TERM 932 824593 - 824617 + F 90 -17.2 -2.6063 | overlap 824590 824591 824597 CGCGTTATCGCCATG CAGAGCCCGC CCCGT GCGGGCTCTG TGCATTGTGGGTCGC TERM 933 824901 - 824918 + G 73 -6.9 -4.29304 | CAGCTCTTTTATCAG GGCGAGC AGCT GCTCGGC TTTATCTTCTGGTGG AHA_0769 824742 - 825278 + | acetyltransferase AHA_0770 825334 - 826068 + | 3-oxoacyl-[acyl-carrier-protein] reductase TERM 934 826091 - 826117 + T 80 -8.7 -4.15044 | gap 1, opp_overlap 826095, overlap 826095 CCGAGAGTGAATACA AC-AAGGGGCGC CTCG GCGCCCCTTCGG TTTATTCCCCCAGCA TERM 935 826095 - 826112 + T 95 -14.1 -3.37761 | opp_overlap 826095, overlap 826091 GAGTGAATACAACAA GGGGCGC CTCG GCGCCCC TTCGGTTTATTCCCC TERM 936 826112 - 826095 - T 100 -14.1 -3.97511 | opp_overlap 826095 826091 GAGTGAATACAACAA GGGGCGC CTCG GCGCCCC TTCGGTTTATTCCCC AHA_0771 829052 - 826119 - | glutamate-ammonia ligase adenylyltransferase AHA_0772 829564 - 829124 - | acetyltransferase TERM 937 829615 - 829591 - R 100 -13.6 -5.14563 | GCCGCGATGAAAAAA GAAAGGCCCC TCGTG GGGGCCTTCC AGTCTAACCAGATTG AHA_0773 830995 - 829745 - | methyl-accepting chemotaxis protein TERM 938 830183 - 830160 - G 75 -12.4 -3.58343 | gap 1, opp_overlap 830165 830166 830170 GCGACCACCGCGAAA CCACGGCCGGC CTC GCCGGC-GCGG GCGGCTTCGATGGCG TERM 939 831299 - 831326 + G 75 -12 -3.58726 | overlap 831291 GGCCCGAGCCTCCGA CCGGATGGCCTT CTTC AAGGCCAACTGG TTCTATCTGCCGGGC AHA_0774 831027 - 831848 + | ion transporter, putative TERM 940 831911 - 831921 + F 74 -2.4 -5.02357 | CCAGCTCTCAGCTCG GGGG GCG CCAC TTTTCTTTGCTTGTC AHA_0775 832001 - 832606 + | arylsulfatase TERM 941 832629 - 832652 + F 100 -16.8 -5.36441 | opp_overlap 832632 TGTCGGAAGCAGAGT GAAGGGTCGC CATG GCGACCCTTC TTTTTTGTCTGGAGA TERM 942 832649 - 832632 - f 83 -12.7 -3.16267 | opp_overlap 832629 CGGAAGCAGAGTGAA GGGTCGC CATG GCGACCC TTCTTTTTTGTCTGG TERM 943 832821 - 832835 + F 83 -12.8 -3.20382 | CATTATCGGCGTTTC GGCGGC ACG GCCGCC TTCGTCGATATCAGC AHA_0776 832876 - 836040 + | bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase TERM 944 836060 - 836077 + F 100 -14.1 -4.73388 | opp_overlap 836057 836055 836060 CCGTGACCAACATCA GGCCGCC TGCG GGCGGCC TTTTTCATGGGCGTT TERM 945 836077 - 836060 - f 83 -14.1 -2.77523 | opp_overlap 836060, overlap 836057 836055 CCGTGACCAACATCA GGCCGCC TGCG GGCGGCC TTTTTCATGGGCGTT AHA_0777 836241 - 837020 + | NUDIX family hydrolase TERM 946 837054 - 837031 - f 74 -9.5 -3.6682 | opp_overlap 837029, overlap 837033 CCTGAGGGATGCAAA GAGGGGCGC TTGTTT GCGCCCCTT CACATCTTTGCACTC TERM 947 837052 - 837033 - f 80 -12.1 -3.41569 | opp_overlap 837029, overlap 837031 TGAGGGATGCAAAGA GGGGCGC TTGTTT GCGCCCC TTCACATCTTTGCAC hemE 837040 - 838230 + | uroporphyrinogen decarboxylase TERM 948 838256 - 838273 + F 100 -14.1 -4.39166 | opp_overlap 838256 CAGCACAGTGAACAA CGGGGCC TGGG GGCCCCG TTTTGCTGTCTGCGG TERM 949 838273 - 838256 - f 95 -14.1 -3.71487 | opp_overlap 838256 CAGCACAGTGAACAA CGGGGCC TGGG GGCCCCG TTTTGCTGTCTGCGG AHA_0779 838411 - 839340 + | ROK family protein epd 839390 - 840400 + | erythrose 4-phosphate dehydrogenase pgk 840463 - 841626 + | phosphoglycerate kinase TERM 950 841633 - 841662 + F 100 -17.9 -4.0162 | opp_overlap 841631, overlap 841638 AAAGCCTAATTGACC CGAGACGGGGGGC AAAA GCCTCCCGTTTCG TTTATCATGTGCCCG TERM 951 841638 - 841657 + F 95 -12.8 -4.16785 | opp_overlap 841631, overlap 841633 CTAATTGACCCGAGA CGGGGGGC AAAA GCCTCCCG TTTCGTTTATCATGT fbaA 841743 - 842822 + | fructose-bisphosphate aldolase TERM 952 842852 - 842869 + F 100 -14.1 -4.8622 | opp_overlap 842852, overlap 842864 TTGATTGCATGAAAA GGCGCCC TGCG GGGCGCC TTTTTCATTGCAGCA TERM 953 842869 - 842852 - f 100 -14.1 -4.26903 | opp_overlap 842852 842864 TTGATTGCATGAAAA GGCGCCC TGCG GGGCGCC TTTTTCATTGCAGCA TERM 954 842913 - 842930 + F 79 -7.7 -4.41177 | opp_overlap 842913, overlap 842864 AGCGGACGTGAGCAA GGTGTCT TTCG AGGCACC TTTTGCATTTCTGTG AHA_0783 843043 - 844347 + | oxidoreductase TERM 955 844489 - 844514 + T 84 -12.7 -3.31322 | gap 1 GGGGGATAGGGTGGA TACCCAGGCCTG AGT CAG-CCTGGGTA TTCTGGCCGGTTGCG AHA_0784 844945 - 844532 - | hypothetical protein TERM 956 845077 - 845024 - R 95 -11 -4.57569 | opp_overlap 845024 845050, overlap 845035 GGATTGCCGGAAAAA TGGCGGTCAAACCGGG-GGCCCGCAC GGTT GCACGGGCCACCCGGCCTCAGCG-CA GCTTCTCCAGCTGGC TERM 957 845067 - 845035 - R 100 -17 -3.55203 | gap 1, opp_overlap 845024 845050, overlap 845024 AAAATGGCGGTCAAA CCGGG-GGCCCGCAC GGTT GCACGGGCCACCCGG CCTCAGCGCAGCTTC dsbD 846842 - 845070 - | thiol:disulfide interchange protein DsbD TERM 958 845924 - 845901 - G 71 -13.8 -2.58861 | opp_overlap 845920, overlap 845900 GATCATCCCCATAAT GGCGACCCCG AGCA CGGAGCCGCC CTGCTGGCGGTTGGA TERM 959 846569 - 846582 + g 76 -8.1 -4.14392 | CGGGCAGCACCGGCT CCTCG AAGG CGAGG TTTTCCCCCTTGAAG cutA 847246 - 846839 - | divalent-cation tolerance protein CutA AHA_0787 847323 - 847691 + | hypothetical protein TERM 960 847725 - 847760 + T 100 -11.3 -4.75404 | gap 1, overlap 847727 847728 CGGGCTTGTCCTCCC CCA-GCACCATCATGC CCCTT GCATGATGGTGCCTCG TTTTTCCTGCCGTTT TERM 961 847727 - 847757 + T 95 -14.1 -3.28472 | overlap 847725 847728 GGCTTGTCCTCCCCC AGCACCATCATGC CCCTT GCATGATGGTGCC TCGTTTTTCCTGCCG TERM 962 847728 - 847756 + T 90 -17.6 -2.56601 | overlap 847727 847725 GCTTGTCCTCCCCCA GCACCATCATGC CCCTT GCATGATGGTGC CTCGTTTTTCCTGCC AHA_0788 848224 - 847787 - | transmembrane pair TERM 963 849201 - 849235 + G 93 -18.7 -3.21199 | gap 1, opp_overlap 849203, overlap 849204 GGGCGCTGGCTGAAG GAGGCCCTGCTGGCGC GGGC GCGCTAGCAGGG-CTC TTCGCTTACTCGGTC AHA_0789 848349 - 849227 + | regulatory protein, LysR:LysR, substrate-binding TERM 964 849234 - 849203 - T 86 -15.8 -2.70932 | opp_overlap 849201 849204 GCGCTGGCTGAAGGA GGCCCTGCTGGCGC GGGC GCGCTAGCAGGGCT CTTCGCTTACTCGGT TERM 965 849204 - 849233 + T 100 -21.5 -3.16676 | opp_overlap 849203, overlap 849201 CGCTGGCTGAAGGAG GCCCTGCTGGCGC GGGC GCGCTAGCAGGGC TCTTCGCTTACTCGG AHA_0790 850146 - 849241 - | chain A, Ygfz protein AHA_0791 850260 - 850529 + | TPR repeat-containing protein TERM 966 850570 - 850587 + G 71 -11.3 -3.46271 | opp_overlap 850572, overlap 850557 ATCACCGCCTCCAGA CAGCAGC GCCT GCTGCTG TTGTCGCTGTTTCTG AHA_0792 850549 - 850926 + | hypothetical protein TERM 967 850974 - 850945 - T 100 -18.7 -4.36914 | opp_overlap 850934 850931 850952 CTCTTCCCCATAAAA CAGATGACCCCGC CGGA GCGAGGTCATCTG GGGGATGCGGATCGA nadB 852758 - 851151 - | L-aspartate oxidase TERM 968 851368 - 851387 + g 84 -11.4 -4.24342 | AGCAGGTCGATGCGG CGCTTGGC CCGG GCCAGGCG TTTGTTGGTACGCAC TERM 969 852812 - 852832 + H 100 -6.1 -5.47218 | overlap 852813 AGCCCAAGCGAGGGT GGTGATGCA GCC TGCGTCACA TTTTTTTCAATGCAA TERM 970 852813 - 852831 + H 76 -9.6 -3.87608 | overlap 852812 GCCCAAGCGAGGGTG GTGATGCA GCC TGCGTCAC ATTTTTTTCAATGCA AHA_0794 852941 - 853522 + | RNA polymerase sigma factor RpoE TERM 971 853774 - 853746 - gf 70 -9.5 -3.36273 | overlap 853747 GCGCTGGAAGATGAA CCCACCATCCTGG CGC CCAAGCCGGTGGA GAGCAAACCTGCCGC TERM 972 853800 - 853782 - gf 71 -8 -3.83026 | CCGGTGGAGAGCAAA CCTGCCGC ACC GCAGCCGG GTACCGCCAAGGTCG rseA 853545 - 854135 + | sigma-E factor negative regulatory protein TERM 973 854208 - 854238 + GF 100 -24.1 -3.61715 | GCTGATCAGTGCCAA GGCCTCGGCCGAC GACAA GTCGGCCGAGGCC TTGTTGCAGCAGATG TERM 974 854377 - 854397 + GF 71 -11.2 -2.87132 | GCTCACCTCAGCTAT CTCGATGG CAAGA CCATCGAG TATCTGCAGCGCCAG TERM 975 854533 - 854565 + GF 95 -14.8 -3.18582 | gap 1 CTGGAGAGCTATGAC CCCGTGCTGGCCGGC CGCA GCCGGGCGGC-CGGG TTGGTGGCTCAGGTC rseB 854071 - 855135 + | sigma-E factor regulatory protein RseB rseC 855229 - 855690 + | sigma-E factor regulatory protein RseC lepA 855811 - 857604 + | GTP-binding protein LepA lepB 857608 - 858531 + | signal peptidase I rnc 858532 - 859203 + | ribonuclease III TERM 976 859206 - 859195 - f 71 -4.4 -4.64598 | CAAGCATTGGAAAAA CTGT CATG ACAG ATACCACTTATTGCG era 859200 - 860099 + | GTP-binding protein Era recO 860100 - 860807 + | DNA repair protein RecO pdxJ 860970 - 861707 + | pyridoxal phosphate biosynthetic protein PdxJ TERM 977 861770 - 861743 - T 81 -12.8 -3.13403 | opp_overlap 861748, overlap 861748 CCCGCGGTACGAAGA GAAAAGGGACGC CACG GCGTCCCTTTTT GTCAGCTCAAACTTG TERM 978 861765 - 861748 - T 100 -12.7 -4.70583 | opp_overlap 861748, overlap 861743 GGTACGAAGAGAAAA GGGACGC CACG GCGTCCC TTTTTGTCAGCTCAA TERM 979 861748 - 861765 + T 100 -12.7 -4.85599 | opp_overlap 861748 861743 GGTACGAAGAGAAAA GGGACGC CACG GCGTCCC TTTTTGTCAGCTCAA AHA_0804 863703 - 861793 - | enterotoxin AHA_0805 864660 - 863806 - | tagatose bisphosphate family class II aldolase nagA-1 865850 - 864651 - | N-acetylglucosamine-6-phosphate deacetylase TERM 980 864708 - 864747 + g 74 -14.2 -2.58074 | gap 1, opp_overlap 864707 864705 864703 864708, overlap 864707 864705 864703 TTCAGGGAAAGAGAG CGGGGTTG-GGGCGGGGAG GAT CTCCCGGCCCGCTACCCAG ATATGTTGTTGATTG TERM 981 864747 - 864708 - G 74 -14.2 -2.56124 | gap 1, opp_overlap 864708 864707 864705 864703, overlap 864707 864705 864703 TTCAGGGAAAGAGAG CGGGGTTG-GGGCGGGGAG GAT CTCCCGGCCCGCTACCCAG ATATGTTGTTGATTG AHA_0807 866348 - 865851 - | N-acetyl-galactosamine TERM 982 866327 - 866307 - G 74 -9.6 -3.83026 | TTCCTTTACAGCAAA GGGCCGGC CTGGT GCCGGCAC CGGATTAGAGGAAGC AHA_0808 867210 - 866332 - | N-acetylgalactosamine permease IID component AHA_0809 867976 - 867200 - | N-acetylgalactosamine permease IIC component 1 AHA_0810 868465 - 867992 - | N-acetylgalactosamine-specific PTS system transporter subunit IIB AHA_0811 869634 - 868465 - | putative tagatose-6-phosphate ketose/aldose isomerase TERM 983 869544 - 869559 + g 70 -11.8 -3.16055 | CCATGGTGAGGGTCT CCCGCC AGGT GGCGGG TTGCTGGCGAATTTC AHA_0812 870960 - 869647 - | D-tagatose-bisphosphate aldolase, class II, non-catalytic subunit AHA_0813 871233 - 872030 + | DNA-binding transcriptional regulator AgaR TERM 984 872085 - 872050 - T 100 -16.2 -3.36327 | opp_overlap 872052 872057, overlap 872051 872057 GCACTCGATGGAGAA TGCGAAAGAGGGACGC CGCG GCGTCCCTCTTTCGTG GTTGGGGGCAAAGCT TERM 985 872084 - 872051 - T 100 -19.7 -2.61582 | opp_overlap 872052 872057, overlap 872050 872057 CACTCGATGGAGAAT GCGAAAGAGGGACGC CGCG GCGTCCCTCTTTCGT GGTTGGGGGCAAAGC TERM 986 872052 - 872083 + T 100 -23.2 -2.70932 | opp_overlap 872051 872050 872057, overlap 872057 ACTCGATGGAGAATG CGAAAGAGGGACGC CGCG GCGTCCCTCTTTCG TGGTTGGGGGCAAAG TERM 987 872057 - 872078 + T 100 -15.9 -3.84246 | opp_overlap 872057 872051 872050, overlap 872052 ATGGAGAATGCGAAA GAGGGACGC CGCG GCGTCCCTC TTTCGTGGTTGGGGG TERM 988 872078 - 872057 - T 100 -15.9 -3.69621 | opp_overlap 872052 872057, overlap 872051 872050 ATGGAGAATGCGAAA GAGGGACGC CGCG GCGTCCCTC TTTCGTGGTTGGGGG AHA_0814 873020 - 872100 - | putative N-acetylmuramoyl-L-alanine amidase AHA_0815 873503 - 873024 - | hypothetical protein TERM 989 873574 - 873562 - R 74 -4.7 -4.82901 | overlap 873563 CCCGCGTCAGAAAAA GCGGG TTG CCCGG TTCAGGATAGATAGC AHA_0816 876287 - 873576 - | hybrid sensory histidine kinase BarA rumA 876441 - 877763 + | 23S rRNA 5-methyluridine methyltransferase AHA_0818 878030 - 880240 + | GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase)(ppGpp synthetase I) ((p)ppGpp synthetase) TERM 990 880286 - 880258 - f 71 -9.6 -3.56142 | gap 1, opp_overlap 880260 880261, overlap 880254 880259 GTCATCAACAACCAA CTCGTGACCGACC GCCA GGTCGGTCACT-G TTTTTCCCCTGCGTT TERM 991 880260 - 880286 + F 100 -13.1 -4.63184 | gap 1, opp_overlap 880258 880259 880254, overlap 880261 CATCAACAACCAACT C-GTGACCGACC GCCA GGTCGGTCACTG TTTTTCCCCTGCGTT TERM 992 880261 - 880284 + F 100 -16.8 -3.92746 | opp_overlap 880258 880259 880254, overlap 880260 ATCAACAACCAACTC GTGACCGACC GCCA GGTCGGTCAC TGTTTTTCCCCTGCG AHA_0819 880325 - 881122 + | MazG family protein pyrG 881264 - 882901 + | CTP synthetase TERM 993 882941 - 882913 - f 78 -5.8 -4.72188 | opp_overlap 882914, overlap 882914 GTAATTGAAAATAAA TGCGGTTGGGGC CCTGT GCCGCAGCCGCT TTTTTTGGCATATTT TERM 994 882914 - 882940 + F 100 -11.5 -5.46629 | opp_overlap 882914 882913 TAATTGAAAATAAAT GCGGTTGGGGC CCTGT GCCGCAGCCGC TTTTTTTGGCATATT TERM 995 883065 - 883079 + G 81 -6.4 -4.75472 | overlap 883066 CGTTGAGGCCGAAGT TCACCT GGA AGGTGG TTTTGTTGGTATGGC TERM 996 883661 - 883642 - g 70 -10 -3.66178 | GCTCCGAACCTGAAA TCCAACGC CGAA GCGCTGGA AGTGATCGCCGAAGC eno 882991 - 884292 + | phosphopyruvate hydratase TERM 997 884339 - 884320 - f 100 -16.4 -3.53811 | opp_overlap 884320 TCCACGCTTTGCAAA GCCCCGCC AATC GGCGGGGC TTTTTCGTTTCTGCT TERM 998 884320 - 884339 + F 100 -16.4 -5.05505 | opp_overlap 884320 TCCACGCTTTGCAAA GCCCCGCC AATC GGCGGGGC TTTTTCGTTTCTGCT AHA_0822 884471 - 884788 + | cell division protein ispD 884781 - 885512 + | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase ispF 885509 - 885985 + | 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase truD 885985 - 887043 + | tRNA pseudouridine synthase D surE 887024 - 887785 + | acid phosphatase SurE TERM 999 888260 - 888285 + G 78 -14.7 -3.04144 | GACGGCCCTCACTGA CCAGCTGGCCG ATGG TGGCCGGCTGG TGTTGCCGGTGGGGG pcm 887790 - 888407 + | protein-L-isoaspartate(D-aspartate) O-methyltransferase TERM 1000 888841 - 888853 + GF 73 -3.3 -4.77036 | GACCTCGCTGATCGG GCGTG GCA TGCGC TTTTTCCTGGTAGCA AHA_0828 888410 - 888985 + | hypothetical protein TERM 1001 889192 - 889182 - gf 77 -2.4 -5.04385 | TACACGGTGAAAAAA GGGG ACA CCCT CTACTCCATCGCCTT nlpD 888924 - 890036 + | lipoprotein NlpD rpoS 890084 - 891067 + | RNA polymerase sigma factor RpoS TERM 1002 891130 - 891104 - T 100 -13.8 -4.45544 | opp_overlap 891110, overlap 891110 GCTTACCAAGTAAAA CAAAAAGGGGCC AAA GGCCCCTTTTTC ATGCTGGCAGGATCC TERM 1003 891124 - 891110 - T 100 -12.8 -5.54338 | opp_overlap 891110, overlap 891104 CAAGTAAAACAAAAA GGGGCC AAA GGCCCC TTTTTCATGCTGGCA TERM 1004 891110 - 891124 + T 100 -12.8 -4.77036 | opp_overlap 891110 891104 CAAGTAAAACAAAAA GGGGCC AAA GGCCCC TTTTTCATGCTGGCA gcp 892165 - 891152 - | O-sialoglycoprotein endopeptidase TERM 1005 892087 - 892099 + g 78 -4.8 -4.77036 | GGCTATACAACTGGT GGGA AAGGA TCCC TTTTTGATCGTCGAA rpsU 892345 - 892560 + | ribosomal protein S21 AHA_0833 892575 - 893018 + | GatB/YqeY domain-containing protein TERM 1006 893047 - 893072 + F 100 -11.9 -5.8901 | gap 1, opp_overlap 893047 TGTTTGGTCAAAGAA GCCGTGC-TTCC CTG GGAATGCGCGGC TTTTTTATTTTCTAT TERM 1007 893072 - 893047 - f 76 -9.7 -3.90744 | gap 1, opp_overlap 893047 TGTTTGGTCAAAGAA GCCGTGC-TTCC CTG GGAATGCGCGGC TTTTTTATTTTCTAT TERM 1008 893874 - 893890 + G 74 -12.3 -3.40522 | opp_overlap 893874 CAAGCAGGCACACAA GGATCCG CGC CGGATCC TTGTGGTAGAAGGCT TERM 1009 893890 - 893874 - g 74 -12.3 -3.5361 | opp_overlap 893874 CAAGCAGGCACACAA GGATCCG CGC CGGATCC TTGTGGTAGAAGGCT dnaG 893107 - 894894 + | DNA primase TERM 1010 895017 - 895041 + F 81 -7.1 -4.6821 | opp_overlap 895023, overlap 895019 TCATGACCGACGCCG CAACCAGACAT AGC ATGTCTGGCGG TTTTCTATTAGAATT AHA_0835 895117 - 896973 + | RNA polymerase sigma factor RpoD TERM 1011 897026 - 897010 - T 100 -15.1 -4.57341 | opp_overlap 897010 AACCGCTGCCAAAAA GCCCCGC CAT GCGGGGC TTTGTTTTATCCGTG TERM 1012 897010 - 897026 + T 100 -15.1 -4.7878 | opp_overlap 897010 AACCGCTGCCAAAAA GCCCCGC CAT GCGGGGC TTTGTTTTATCCGTG TERM 1013 897251 - 897282 + T 100 -17.4 -3.92522 | opp_overlap 897258, overlap 897252 897254 897258 GGGGCCACCATTTTC AGACAAAGCCGCTC TCTT GAGCGGCTTTGTCG TTTCTGGCGTTCACC TERM 1014 897252 - 897281 + T 100 -20.9 -2.95192 | opp_overlap 897258, overlap 897251 897254 897258 GGGCCACCATTTTCA GACAAAGCCGCTC TCTT GAGCGGCTTTGTC GTTTCTGGCGTTCAC TERM 1015 897254 - 897279 + T 100 -17.7 -3.02632 | opp_overlap 897258, overlap 897252 897251 897258 GCCACCATTTTCAGA CAAAGCCGCTC TCTT GAGCGGCTTTG TCGTTTCTGGCGTTC TERM 1016 897275 - 897258 - T 93 -12.7 -4.04206 | opp_overlap 897254 897252 897251 897258 CCATTTTCAGACAAA GCCGCTC TCTT GAGCGGC TTTGTCGTTTCTGGC TERM 1017 897258 - 897275 + T 95 -12.7 -4.17701 | opp_overlap 897258, overlap 897254 897252 897251 CCATTTTCAGACAAA GCCGCTC TCTT GAGCGGC TTTGTCGTTTCTGGC TERM 1018 897635 - 897665 + T 84 -13.2 -3.13164 | opp_overlap 897638, overlap 897638 GCATGACGCCATAAA AAAGGCCTCCCGCC GAT GGTGGGAGGCCTGG TTCAGTGCTTCAGGG TERM 1019 897638 - 897662 + T 100 -19.3 -2.77235 | opp_overlap 897638, overlap 897635 TGACGCCATAAAAAA GGCCTCCCGCC GAT GGTGGGAGGCC TGGTTCAGTGCTTCA TERM 1020 897662 - 897638 - T 100 -17.1 -5.26316 | opp_overlap 897638 897635 TGACGCCATAAAAAA GGCCTCCCGCC GAT GGTGGGAGGCC TGGTTCAGTGCTTCA AHA_0837 900277 - 897701 - | alpha-amylase TERM 1021 900547 - 900525 - R 75 -11.3 -3.4617 | gap 1, opp_overlap 900523, overlap 900527 ATGAAGAGCAATGAA CA-GGGGCCC TGCA GGGCCCCATG AGTATTCAGGCGTCG TERM 1022 900544 - 900527 - R 95 -14.1 -3.29558 | opp_overlap 900523, overlap 900525 GAAGAGCAATGAACA GGGGCCC TGCA GGGCCCC ATGAGTATTCAGGCG AHA_0838 901107 - 900553 - | cytochrome B TERM 1023 901067 - 901035 - G 81 -15.6 -2.98823 | gap 1 GGTTGCCGATACAGA TGG-CCGCCACACCC CAGT GGGTGAGGCGGACCA GACTATCCCAGTGGA AHA_0839 901462 - 901088 - | hypothetical protein TERM 1024 901720 - 901705 - R 80 -11.8 -3.3353 | opp_overlap 901703 901705, overlap 901703 901701 CGCCGGATAAAGAGA GGGCCC TTGC GGGCCC TGTTCATTACTGCTG TERM 1025 901705 - 901720 + r 78 -11.8 -3.27743 | opp_overlap 901705 901703 901701, overlap 901703 CGCCGGATAAAGAGA GGGCCC TTGC GGGCCC TGTTCATTACTGCTG purD 903016 - 901727 - | phosphoribosylamine--glycine ligase TERM 1026 903119 - 903101 - R 100 -17.4 -4.91357 | AAAGAGACAACAAAA GGGCCGCC GAC GGCGGCCC TGATCCATCAGTGAC purH 904719 - 903127 - | bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase TERM 1027 904845 - 904834 - H 75 -5.8 -4.56597 | overlap 904835 904836 CTCTCGCCTGAAAAA CCTG CCGA CAGG CAAAAGCGTTTTAGG zntR 905131 - 905568 + | zinc-responsive transcriptional regulator AHA_0843 905558 - 906094 + | riboflavin biosynthesis protein RibD domain-containing protein TERM 1028 906119 - 906147 + G 77 -2.1 -5.03314 | CAGCCCCCTTGCAGG CGGGCCGGGAGAG GCG CACAATCGGCACG TTTTTTCGCCGTCAG TERM 1029 906251 - 906236 - g 74 -9 -3.95324 | TATGGCCAAGAAGAA GGTGAC CCAG GTCACC ACCGAGCCCGCCTGC TERM 1030 906405 - 906445 + G 70 -11.8 -3.14132 | opp_overlap 906416 GGCAAGCGGTGGGAG CCCGGCCAACAGCAGATG GTACG CGTCTGCTGCTGAGCGGG TTCCTGCCGCAAGGC AHA_0844 906075 - 906440 + | hypothetical protein TERM 1031 906500 - 906472 - T 100 -23.3 -4.21462 | opp_overlap 906472, overlap 906475 AGGCATCAGCTAAAA CAATCAGGGCGCC AAT GGCGCCCTGATTG TTTCTCTATTCGTTG TERM 1032 906472 - 906500 + T 100 -23.3 -4.24534 | opp_overlap 906472 906475 AGGCATCAGCTAAAA CAATCAGGGCGCC AAT GGCGCCCTGATTG TTTCTCTATTCGTTG TERM 1033 906497 - 906475 - T 100 -19.2 -4.22883 | opp_overlap 906472, overlap 906472 CATCAGCTAAAACAA TCAGGGCGCC AAT GGCGCCCTGA TTGTTTCTCTATTCG TERM 1034 906514 - 906559 + T 74 -11.3 -3.18264 | gap 1, opp_overlap 906543, overlap 906516 TGTTTCTCTATTCGT TG-GTGCTGATTCACTCTCTTG CCG CAAGAGAGTGAACCCGTGCTCA TTCGTCCATAAAGAG TERM 1035 906516 - 906556 + T 83 -14.1 -2.79098 | opp_overlap 906543, overlap 906514 TTTCTCTATTCGTTG GTGCTGATTCACTCTCTTG CCG CAAGAGAGTGAACCCGTGC TCATTCGTCCATAAA AHA_0845 907702 - 906557 - | putative oxygen-independent coproporphyrinogen III oxidase TERM 1036 907786 - 907804 + r 75 -11.6 -3.35679 | opp_overlap 907763 907786 907787, overlap 907787 GCGCCGCGAACGAAA CGGGGGCC GAC GGCCCCCA TTGTAGATGACAACG TERM 1037 907804 - 907786 - R 93 -13.8 -3.90112 | opp_overlap 907786 907787, overlap 907763 907787 GCGCCGCGAACGAAA CGGGGGCC GAC GGCCCCCA TTGTAGATGACAACG TERM 1038 907803 - 907787 - R 86 -15.1 -2.93853 | opp_overlap 907786 907787, overlap 907763 907786 CGCCGCGAACGAAAC GGGGGCC GAC GGCCCCC ATTGTAGATGACAAC TERM 1039 907787 - 907803 + r 83 -15.1 -2.61264 | opp_overlap 907763 907787 907786, overlap 907786 CGCCGCGAACGAAAC GGGGGCC GAC GGCCCCC ATTGTAGATGACAAC rdgB 908433 - 907837 - | RdgB/HAM1 family non-canonical purine NTP pyrophosphatase TERM 1040 908086 - 908112 + g 85 -14.4 -3.59979 | opp_overlap 908085, overlap 908074 CACGCACCAGAAACG GGCGCTCTTGAG ATA CTCGGGGGCGCC TTTCAGCTCGCCCAG AHA_0847 908662 - 909819 + | chloramphenicol resistance protein TERM 1041 909846 - 909862 + F 95 -15.1 -3.76232 | overlap 909860 TGATGGGCACACTCA GGGGGCC TTG GGCCCCC TTCTCTATTTGGCAG AHA_0848 909928 - 910977 + | oxidoreductase, NAD-binding TERM 1042 911149 - 911137 - T 71 -4.9 -4.55491 | opp_overlap 911137 CAGCCAACGAGAAAA TATCA TTG TGATA CTCGTTTTCATTGGG TERM 1043 911375 - 911347 - T 80 -10.9 -3.85698 | opp_overlap 911358, overlap 911353 GCTTGTGGTCAGAAA GAAGAAGCCGCCG CTC CGGCCGCTACTCC GGCCGCCGACGTTGC TERM 1044 911369 - 911353 - T 80 -9.3 -4.15703 | opp_overlap 911358, overlap 911347 GGTCAGAAAGAAGAA GCCGCCG CTC CGGCCGC TACTCCGGCCGCCGA TERM 1045 911554 - 911579 + T 100 -20.5 -5.61596 | opp_overlap 911533 911554 ACCTCATCTGAAGAA CGGGCCCGAAG GCAA CTTCGGGCCCG TTTTTTTATGCCCGT TERM 1046 911579 - 911554 - T 100 -20.5 -3.65224 | opp_overlap 911554, overlap 911533 ACCTCATCTGAAGAA CGGGCCCGAAG GCAA CTTCGGGCCCG TTTTTTTATGCCCGT TERM 1047 911652 - 911685 + T 71 -11.7 -2.52834 | gap 1, overlap 911651 AGAGTACCGGGTTGA GGCGCGCGGTGAGGAT ATG ATCCTCCCAGCG-GCC GTTGATCATCAGGTA AHA_0849 912186 - 911635 - | ribosomal-protein-alanine acetyltransferase AHA_0850 912740 - 912186 - | ribosomal-protein-serine acetyltransferase TERM 1048 912804 - 912820 + H 81 -8 -4.28977 | opp_overlap 912803 912804 ATGTAGCCAATCAAC CCCTTG TACGC CAAGGG TTTTCCATCTGTTCT TERM 1049 913795 - 913765 - g 71 -12.6 -3.05343 | opp_overlap 913765 913769, overlap 913769 TGGACACCCTCAACA TGAATCACGCCACC ACG GGCGGCGCCATTCA TCAGTTCACCTGCCC AHA_0851 913092 - 914861 + | elastase TERM 1050 914888 - 914907 + T 100 -15 -5.61596 | opp_overlap 914888 CGTAATAGAGATAGA GCGCCGGA CTTG TCCGGCGC TTTTTTTATGCGGAT TERM 1051 914907 - 914888 - T 91 -15 -3.10895 | opp_overlap 914888 CGTAATAGAGATAGA GCGCCGGA CTTG TCCGGCGC TTTTTTTATGCGGAT AHA_0852 915806 - 914913 - | LysR family transcriptional regulator AHA_0853 916021 - 917214 + | multidrug resistance protein MdtH TERM 1052 917247 - 917229 - T 100 -17.4 -5.45652 | ACGGGCAATAAAAAA CCGGCCGC TGG GCGGCCGG TAAAAAATACAGTAG AHA_0854 918352 - 917279 - | outer membrane porin protein TERM 1053 918508 - 918524 + r 80 -10.8 -3.83324 | opp_overlap 918508, overlap 918499 AGCAGGCATAAAAAA CGGCCC GAACA GGGCCG TTTGCGTGTTTGTGG TERM 1054 918524 - 918508 - R 100 -10.8 -5.28778 | opp_overlap 918508 918499 AGCAGGCATAAAAAA CGGCCC GAACA GGGCCG TTTGCGTGTTTGTGG AHA_0855 919872 - 918553 - | anaerobic C4-dicarboxylate transporter DcuA TERM 1055 919963 - 919921 - R 100 -13.5 -4.37886 | opp_overlap 919921 TTATTTGGCAGAAAA GCCAATTCCCGATGGGGCT GGGCA AGACCTATCGGGAACTGAC TTTATGGGCCGGGAT TERM 1056 919921 - 919963 + r 82 -11.3 -3.85817 | opp_overlap 919921 TTATTTGGCAGAAAA GCCAATTCCCGATGGGGCT GGGCA AGACCTATCGGGAACTGAC TTTATGGGCCGGGAT TERM 1057 919968 - 919990 + r 100 -16.3 -3.80858 | opp_overlap 919963 CGGGAACTGACTTTA TGGGCCGGG ATAAA CCCGGCCCA TTTGCTCGCTTATAC aspA 921442 - 920000 - | aspartate ammonia-lyase TERM 1058 921717 - 921728 + H 77 -3.6 -4.99035 | opp_overlap 921715 921713, overlap 921713 GACTTCAATCACAGT CTGG CAGA CCGG TTTTTCTGTGGATCC AHA_0857 921814 - 922368 + | protein FxsA AHA_0858 923792 - 922392 - | Na(+) driven multidrug efflux pump TERM 1059 922805 - 922830 + g 86 -12.5 -4.09685 | gap 1, opp_overlap 922788, overlap 922805 GCAGCGCCGCCTTGG C-GCGGGCCGGG TTG CCCGCCCCGCAG TTTTGCGAGATGAAG TERM 1060 922805 - 922829 + g 71 -12.7 -3.05597 | opp_overlap 922788, overlap 922805 GCAGCGCCGCCTTGG CGCGGGCCGGG TTG CCCGCCCCGCA GTTTTGCGAGATGAA groS 923975 - 924268 + | chaperonin GroS groL 924310 - 925944 + | chaperonin GroEL TERM 1061 925964 - 925983 + F 100 -12.8 -5.93809 | opp_overlap 925964 GCCCTGGTTACCAAA CGGCTCGC TTTT GCGGGCCG TTTTTTTTATGGCGA TERM 1062 925983 - 925964 - f 76 -10.6 -3.72576 | opp_overlap 925964 GCCCTGGTTACCAAA CGGCTCGC TTTT GCGGGCCG TTTTTTTTATGGCGA AHA_0861 926082 - 926537 + | oxidoreductase molybdopterin binding subunit TERM 1063 927074 - 927094 + G 73 -12.5 -3.24747 | opp_overlap 927065 GACAAACGCTTTGGC CAGCTGCGC AAT GCGCTGCTG TTCATGGTCTCAGGG AHA_0862 926561 - 928492 + | PAS/GGDEF domain-containing protein TERM 1064 928668 - 928653 - T 70 -9 -3.65827 | GAATCTGCATTGAAA CTGCTG CAAA CAGCAG CTCAATCAGCACCGG TERM 1065 928775 - 928753 - T 100 -14.9 -4.87291 | opp_overlap 928753 GACCCTAACGAAAAA GCCCCCATC CAGTC GATGGGGGC TTTTTTATGTCTGCG TERM 1066 928753 - 928775 + T 100 -14.9 -5.4251 | opp_overlap 928753 GACCCTAACGAAAAA GCCCCCATC CAGTC GATGGGGGC TTTTTTATGTCTGCG AHA_0863 929469 - 928813 - | ribosomal large subunit pseudouridine synthase A AHA_0864 932446 - 929579 - | ATP-dependent helicase HepA TERM 1067 929747 - 929771 + g 74 -12.8 -3.30124 | overlap 929765 CAGATCCTGTTGCAG GGTCTGCGCC ATCTG GGCGCGGGCC TTGTCGACAATCCCG TERM 1068 934899 - 934862 - H 77 -11.5 -3.61398 | opp_overlap 934867, overlap 934865 TCTTCTTGCTAACAA GAATGCAGAGTTAAGAA CTGA TTCTTAACTCTGTTTTC TTCAGCCTTGTGCTG TERM 1069 934896 - 934865 - H 71 -7.4 -3.9461 | opp_overlap 934867, overlap 934862 TCTTGCTAACAAGAA TGCAGAGTTAAGAA CTGA TTCTTAACTCTGTT TTCTTCAGCCTTGTG TERM 1070 934867 - 934894 + H 100 -14.4 -4.65747 | opp_overlap 934865 934862 TTGCTAACAAGAATG CAGAGTTAAGAA CTGA TTCTTAACTCTG TTTTCTTCAGCCTTG TERM 1071 935022 - 935008 - H 74 -7.2 -4.07687 | opp_overlap 934998 935002 935008 ACTTCTTGGCGAAAA CCAAAT TTT ATTTGG TCCTTGTTGTACGAC TERM 1072 935070 - 935040 - H 73 -10.4 -3.40403 | opp_overlap 935046, overlap 935043 CTTGTTGTACGACAA CAAGCTGCGTCGGT TTC ACCGACACTTCTTG GGGTTGTATGGTTAA TERM 1073 935046 - 935064 + H 70 -8.8 -3.70081 | opp_overlap 935043 935040 GTACGACAACAAGCT GCGTCGGT TTC ACCGACAC TTCTTGGGGTTGTAT TERM 1074 935568 - 935556 - H 84 -9.1 -4.2354 | GAAAGGCGAAAAGAA CCCCT GTG AGGGG AGTGAAATAGAACCT TERM 1075 938235 - 938216 - H 100 -15 -4.46675 | opp_overlap 938216 ACCCAATACAAGAAA CCCCGCTC AGAT GAGCGGGG TTTTTTATTGCCTGA TERM 1076 938216 - 938235 + H 100 -15 -5.4833 | opp_overlap 938216 ACCCAATACAAGAAA CCCCGCTC AGAT GAGCGGGG TTTTTTATTGCCTGA AHA_0869 938489 - 938941 + | putative pullulanase TERM 1077 938984 - 939015 + F 100 -18.8 -5.44119 | gap 1, overlap 938985 CGATGAATCGGTCAA TGCCCCGGCTCAGCA CAC TGCTG-GCCGGGGCG TTTTTTTAGGATGAG TERM 1078 938985 - 939014 + F 100 -20.1 -3.85748 | gap 1, overlap 938984 GATGAATCGGTCAAT GCCCCGGCTCAGCA CAC TGCTG-GCCGGGGC GTTTTTTTAGGATGA TERM 1079 939048 - 939073 + F 86 -7.1 -5.10665 | AGGCTCTCTTGTTAT TAAAAATACTA CATA TAGTGTTTTTA TTTTGTTTGTTCGCT TERM 1080 939560 - 939579 + G 78 -7 -4.54047 | overlap 939561 GGCTATGATTTTTCA ACCCTGCG CCCG CGCGGGGC TTTTGTCTCCGGTGC AHA_0870 939149 - 941296 + | ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent AHA_0871 941307 - 941987 + | ribonucleotide reductase system TERM 1081 941996 - 942041 + F 100 -17.1 -4.66537 | gap 2, opp_overlap 942008, overlap 941998 942002 CGGTTGAGTGATTGA GC-GCAG-GCAAAAGGCCGGC CTTGGT GCCGGCCTTTTGCATTGCTGC TTTTCTGTTCGAACG TERM 1082 941998 - 942038 + F 100 -18.5 -3.26141 | gap 1, opp_overlap 942008, overlap 941996 942002 GTTGAGTGATTGAGC GCAG-GCAAAAGGCCGGC CTTGGT GCCGGCCTTTTGCATTGC TGCTTTTCTGTTCGA TERM 1083 942002 - 942033 + F 100 -20.3 -2.63109 | opp_overlap 942008, overlap 941998 941996 AGTGATTGAGCGCAG GCAAAAGGCCGGC CTTGGT GCCGGCCTTTTGC ATTGCTGCTTTTCTG TERM 1084 942027 - 942008 - f 91 -12.1 -4.1899 | opp_overlap 942002 941998 941996 TGAGCGCAGGCAAAA GGCCGGC CTTGGT GCCGGCC TTTTGCATTGCTGCT TERM 1085 942291 - 942277 - g 70 -10 -3.54543 | ATCTACTCCTTCAAA GAGCAC GAC GTGCTC ATCCCCATGACGGTG TERM 1086 943101 - 943089 - g 76 -7.7 -4.2828 | GGGGATCTACGAAAA GGTGA TCG TCACC CGAAATACCCCGGAA AHA_0872 942196 - 943566 + | PhoH family protein TERM 1087 943594 - 943613 + T 100 -13.6 -5.15634 | opp_overlap 943594 TCTTCGTATGAAAAA GGGAAGCC AAGC GGCTTCCC TTTTTTGATCCCGTC TERM 1088 943613 - 943594 - T 100 -13.6 -4.72272 | opp_overlap 943594 TCTTCGTATGAAAAA GGGAAGCC AAGC GGCTTCCC TTTTTTGATCCCGTC AHA_0873 943744 - 943634 - | hypothetical protein thiQ 944511 - 943804 - | thiamine ABC transporter, ATP-binding protein TERM 1089 944128 - 944176 + g 71 -9.4 -3.73068 | GCCGCCGGAGAGCTG TTCCGGGAGTCGGGTGAGCATC TCGCC GAGGCCAACCCGGCTCGCGGCA TTCTTCACTTGGGCC thiP 946199 - 944577 - | thiamine/thiamine pyrophosphate ABC transporter, permease protein TERM 1090 945964 - 945940 - G 76 -11.4 -3.72576 | gap 1, overlap 945925 945941 CGGCGGCCGATGAAA CGGCGCCGCGC CAGG GCGCGG-GCCA CCGGAATGGCCAGCC TERM 1091 945963 - 945941 - G 70 -12.7 -2.83403 | gap 1, overlap 945925 945940 GGCGGCCGATGAAAC GGCGCCGCGC CAGG GCGCGG-GCC ACCGGAATGGCCAGC TERM 1092 946109 - 946094 - G 70 -11.8 -3.21276 | overlap 946092 CGGCCTGCCACAACA GGGCCG CCAG CGGCCC CAGGGAGAGCAGCAG thiB 947176 - 946196 - | thiamin/thiamin pyrophosphate ABC transporter, periplasmic thiamin/thiamin pyrophospate-binding protein TERM 1093 946973 - 947017 + g 81 -13.5 -3.57144 | GTGTTTGCCTTCCAG CCGCAGCCGGTTGAGGATGGC CAC GCCATCTTCAAGCGGCACCAG TTTGAGGGTGCAGCC TERM 1094 947242 - 947227 - H 77 -4 -5.02074 | gap 1 TGAGGGCGCAAAAAA TGAGCGC CAT GC-CTCA AATTCCTCCGCCAGC TERM 1095 947629 - 947604 - g 76 -9 -3.99374 | gap 1, overlap 947598 GGCCACCAACAACAA CCTGCTGCCCC CCTTC GAGGC-GCAGG CCCGCATCATCCGGG AHA_0877 947341 - 947700 + | type IV pilus assembly protein PilZ TERM 1096 947727 - 947749 + T 100 -13.5 -4.00124 | ACCCTTCGTCATGCA TCGACCAGC CCCGC GCTGGTCGA TTTCCTTCTGGCGTA AHA_0878 948729 - 947803 - | hypothetical protein TERM 1097 948813 - 948794 - R 100 -13.6 -4.77165 | opp_overlap 948794 948790 GGCCTGACAACAAAA CAGGGAGC CGCG GCTCCCTG TTGATTCTACTCGTT TERM 1098 948794 - 948813 + r 89 -13.6 -3.48438 | opp_overlap 948794, overlap 948790 GGCCTGACAACAAAA CAGGGAGC CGCG GCTCCCTG TTGATTCTACTCGTT leuD 949445 - 948846 - | isopropylmalate isomerase small subunit TERM 1099 949086 - 949098 + g 71 -9.1 -3.73534 | CTCCTTCAGCCGCAC CGGCA CCA TGCCG TTGTTGATGGCGTTG TERM 1100 949253 - 949207 - G 88 -16.7 -3.35679 | opp_overlap 949206 CGGCTCGAGCCACAA CCGAAGTTCTCGCGG-GCCAGCA GGA TGCTGGCACCG-GCGAACTGCGG CTGGTTGAGCACGAA leuC 950855 - 949458 - | 3-isopropylmalate dehydratase, large subunit leuB 951973 - 950888 - | 3-isopropylmalate dehydrogenase leuA-1 953550 - 951976 - | 2-isopropylmalate synthase TERM 1101 953624 - 953606 - H 100 -14.6 -5.60993 | opp_overlap 953579 953606 GTTGGCATAAAAAAA CCCGTGCA GGG TGCACGGG TTTTTGTAAATTCCG TERM 1102 953606 - 953624 + H 100 -14.6 -4.91712 | opp_overlap 953606, overlap 953579 GTTGGCATAAAAAAA CCCGTGCA GGG TGCACGGG TTTTTGTAAATTCCG AHA_0883 953958 - 954581 + | transcriptional regulator, TetR family protein TERM 1103 954627 - 954600 - f 79 -12.8 -2.91264 | opp_overlap 954607, overlap 954607 TTTGCCACCTAGACA GCAAAAAGGGCC ATTC GGCCCTTTTTTC ATAAATCTGTTATCC TERM 1104 954620 - 954607 - f 100 -9.5 -4.84527 | opp_overlap 954607, overlap 954600 CCTAGACAGCAAAAA GGGCC ATTC GGCCC TTTTTTCATAAATCT TERM 1105 954607 - 954620 + F 100 -9.5 -5.17353 | opp_overlap 954607 954600 CCTAGACAGCAAAAA GGGCC ATTC GGCCC TTTTTTCATAAATCT AHA_0884 954707 - 955207 + | PAP2 family protein AHA_0885 955207 - 956316 + | glycosyl transferase AHA_0886 956353 - 956505 + | hypothetical protein TERM 1106 956522 - 956546 + F 100 -5.6 -5.53288 | overlap 956507 956525 CCCCTGCCAGGCTTG CGGGCCCACC CTGGC GGTGGGCTTA TTTTTTTCCATTCAG TERM 1107 956525 - 956543 + F 100 -11.7 -4.83715 | overlap 956507 956522 CTGCCAGGCTTGCGG GCCCACC CTGGC GGTGGGC TTATTTTTTTCCATT ilvB-1 956895 - 958613 + | acetolactate synthase, large subunit, biosynthetic type AHA_0888 958586 - 958708 + | hypothetical protein ilvH 958705 - 959199 + | acetolactate synthase 3 regulatory subunit TERM 1108 959230 - 959245 + T 100 -10.4 -4.72272 | opp_overlap 959230 959229, overlap 959222 GTTTGTTGTCCAAAG GGGCTC TTCG GAGCCC TTTTTCATGGGCGCA TERM 1109 959565 - 959550 - T 100 -11.8 -5.96219 | opp_overlap 959550 CAGCCATAAAAAAAA CCCGCC AATT GGCGGG TTTTTGAGGTCTCAT TERM 1110 959550 - 959565 + T 100 -11.8 -4.65168 | opp_overlap 959550 CAGCCATAAAAAAAA CCCGCC AATT GGCGGG TTTTTGAGGTCTCAT AHA_0890 961746 - 959593 - | phosphate acetyltransferase TERM 1111 961782 - 961799 + r 95 -14.1 -3.25823 | opp_overlap 961782 TTGGGATCAGGAAAA GGCCGCC CTTG GGCGGCC TTGCTCTACAGCGAA TERM 1112 961799 - 961782 - R 100 -14.1 -4.30576 | opp_overlap 961782 TTGGGATCAGGAAAA GGCCGCC CTTG GGCGGCC TTGCTCTACAGCGAA ackA-1 963018 - 961816 - | acetate kinase AHA_0892 963321 - 963761 + | hypothetical protein TERM 1113 963803 - 963788 - T 76 -11.8 -3.15861 | opp_overlap 963788 CATGACTCGGACCAA GGCGCC TCGC GGCGCC TTTTTCATATCTATC TERM 1114 963788 - 963803 + T 100 -11.8 -4.86133 | opp_overlap 963788 CATGACTCGGACCAA GGCGCC TCGC GGCGCC TTTTTCATATCTATC AHA_0893 964317 - 963817 - | hypothetical protein TERM 1115 964306 - 964321 + g 71 -5.4 -4.42386 | CAGACGTTCGGTGTG GCTCAT GTTC ATGGGC TTTTCTCACTGGAAA TERM 1116 964681 - 964700 + r 95 -15 -3.71873 | opp_overlap 964681 ATGCGAATAAAAAAA GGGCCTGC ACTT GCAGGCCC TTTCCATATGGGTAG TERM 1117 964700 - 964681 - R 100 -15 -5.80364 | opp_overlap 964681 ATGCGAATAAAAAAA GGGCCTGC ACTT GCAGGCCC TTTCCATATGGGTAG AHA_0894 965196 - 964732 - | putative peroxiredoxin bcp AHA_0895 966036 - 965218 - | glycine cleavage system transcriptional repressor TERM 1118 966553 - 966581 + GH 100 -15.3 -3.96624 | CCGTACGCCGCTGCT GCGCGAGCTGTGC GGC GCACAATTCGCGC TTTATAGTGGCGATG dapA-1 966035 - 966922 + | dihydrodipicolinate synthase AHA_0897 966915 - 968039 + | NlpB/DapX lipoprotein TERM 1119 968071 - 968032 - f 83 -7.3 -4.62872 | gap 1, opp_overlap 968043, overlap 968043 ACCAAGCTGCAAAAA CAGAATAGAAACAGGGGC CTTGT GCCCCTGTTT-TGTTATG TAAACCCCCCACAAA TERM 1120 968061 - 968043 - f 95 -11.7 -4.3821 | opp_overlap 968043, overlap 968032 AAAACAGAATAGAAA CAGGGGC CTTGT GCCCCTG TTTTGTTATGTAAAC TERM 1121 968043 - 968061 + F 100 -11.7 -4.84311 | opp_overlap 968043 968032 AAAACAGAATAGAAA CAGGGGC CTTGT GCCCCTG TTTTGTTATGTAAAC purC 968093 - 969208 + | phosphoribosylaminoimidazole-succinocarboxamide synthase TERM 1122 969290 - 969310 + T 100 -9.6 -5.08601 | opp_overlap 969290, overlap 969291 CTGGCTGCAATGGAA CGGGCCCC ATCAC GGGGCCCA TTTTTGTTGCCGTGC TERM 1123 969310 - 969290 - T 83 -12.5 -3.17075 | opp_overlap 969290 969291 CTGGCTGCAATGGAA CGGGCCCCA TCA CGGGGCCCA TTTTTGTTGCCGTGC TERM 1124 969291 - 969309 + T 86 -13.1 -3.64438 | opp_overlap 969290, overlap 969290 TGGCTGCAATGGAAC GGGCCCC ATCAC GGGGCCC ATTTTTGTTGCCGTG AHA_0899 969942 - 969340 - | short chain dehydrogenase TERM 1125 970015 - 969999 - H 74 -2.9 -4.97402 | opp_overlap 970001 GAAAAGGGAGAAAAA GCGCGTA AAA TAAACGC ATTGTTTCCATATTG AHA_0900 970041 - 970940 + | LysR family transcriptional regulator TERM 1126 971610 - 971624 + G 76 -10 -3.89346 | CTCAAGGCCGACCCT GCGCTT CGC AAGCGC TTTGTCAGCTGGGCC AHA_0901 971067 - 971654 + | hypothetical protein AHA_0902 971727 - 972164 + | HIT family hydrolase AHA_0903 972263 - 972961 + | hypothetical protein TERM 1127 973014 - 972984 - T 95 -15.4 -3.53091 | opp_overlap 972987, overlap 972987 ATTGGCCGTTGCAAA TGACGAGGCCACCC ATG GGGTGGCCTCGTTT GTTGGTGCGGGTCGG TERM 1128 972987 - 973011 + T 100 -21.5 -4.2461 | opp_overlap 972984 972987 GGCCGTTGCAAATGA CGAGGCCACCC ATG GGGTGGCCTCG TTTGTTGGTGCGGGT TERM 1129 973011 - 972987 - T 100 -21.5 -2.90496 | opp_overlap 972987, overlap 972984 GGCCGTTGCAAATGA CGAGGCCACCC ATG GGGTGGCCTCG TTTGTTGGTGCGGGT AHA_0904 974030 - 973032 - | hypothetical protein TERM 1130 976400 - 976386 - g 72 -2.7 -4.73682 | overlap 976388 GCGCACAAGATAAAA GGGGC GGCCG GCTCC ATCGGTCTGCGCCGG AHA_0905 974238 - 976550 + | aerobic respiration control sensor protein ArcB TERM 1131 977810 - 977785 - g 74 -14.7 -2.53876 | CGTCATCTCAAGGCA TACCGGCTGGC GGTG GCCAGCCGGGA TCCGCGCTTCAGCGA dgt 976579 - 977934 + | deoxyguanosinetriphosphate triphosphohydrolase TERM 1132 977982 - 978008 + F 76 -10.1 -3.89348 | opp_overlap 977983, overlap 977983 GAGTATTGATAGATG ACTCACCTCCC CATAT GGGGGGTGAGG TTCTTGTATAAAATT TERM 1133 978007 - 977983 - f 72 -12.2 -2.70528 | gap 1, opp_overlap 977983 977982 AGTATTGATAGATGA CTCACCTCCCC ATAT GGGG-GGTGAG GTTCTTGTATAAAAT TERM 1134 977983 - 978007 + F 81 -13.6 -2.92886 | opp_overlap 977983, overlap 977982 AGTATTGATAGATGA CTCACCTCCC CATAT GGGGGGTGAG GTTCTTGTATAAAAT TERM 1135 978125 - 978144 + F 77 -4.2 -4.83615 | overlap 978127 CGACCGCTGCATCAG CAGCGCGA AGAC TCGTGCTC TTTTTCTGCCGCGTG TERM 1136 978166 - 978180 + F 85 -4.2 -5.24129 | opp_overlap 978167, overlap 978167 TGCCGCGTGGAGGAA ACAGGT AAC ACCTGC TTTTTTATCACCCGC TERM 1137 978188 - 978213 + F 74 -11.2 -3.22618 | gap 1, overlap 978186 ACACCTGCTTTTTTA TCACCC-GCGG TTGTC CCGCAGGGTGA TCTCTTCTCTCCGGG AHA_0907 978257 - 978460 + | hypothetical protein TERM 1138 978466 - 978481 + F 71 -8.2 -3.81146 | opp_overlap 978466 978464 978456, overlap 978464 978479 AATAACCTGACAAGA GGGGGT CTTG GCCCCC TTCTTGCTTGAAAAC TERM 1139 978496 - 978515 + F 100 -15 -4.8048 | opp_overlap 978496, overlap 978479 CTTCTTGCTTGAAAA CGGCAGGC GTGA GCCTGCCG TTTTTCGTATCCGGA TERM 1140 978515 - 978496 - f 100 -15 -4.07568 | opp_overlap 978496 978479 CTTCTTGCTTGAAAA CGGCAGGC GTGA GCCTGCCG TTTTTCGTATCCGGA AHA_0908 978610 - 982887 + | virulence sensor protein BvgS, putative AHA_0909 982892 - 984079 + | response regulator AHA_0910 984118 - 986094 + | putative chemotaxis transducer TERM 1141 986153 - 986104 - T 100 -25.9 -3.31144 | opp_overlap 986116, overlap 986105 986116 GCCTGAGGCTGACAA GGGCCATAAAAACGGGGCAGGCC GCTG GGCCTGCCCCGTTTTTTTAGCCT CGCTGGTGCAAGAGA TERM 1142 986152 - 986105 - T 100 -29.4 -2.58544 | opp_overlap 986116, overlap 986104 986116 CCTGAGGCTGACAAG GGCCATAAAAACGGGGCAGGCC GCTG GGCCTGCCCCGTTTTTTTAGCC TCGCTGGTGCAAGAG TERM 1143 986141 - 986116 - T 100 -21.9 -4.8543 | opp_overlap 986116, overlap 986105 986104 CAAGGGCCATAAAAA CGGGGCAGGCC GCTG GGCCTGCCCCG TTTTTTTAGCCTCGC TERM 1144 986116 - 986141 + T 100 -21.9 -5.44119 | opp_overlap 986116 986105 986104 CAAGGGCCATAAAAA CGGGGCAGGCC GCTG GGCCTGCCCCG TTTTTTTAGCCTCGC AHA_0911 986318 - 986214 - | hypothetical protein rfaH 986871 - 986320 - | transcriptional activator RfaH TERM 1145 986680 - 986709 + g 73 -3.3 -4.81249 | overlap 986682 GGGGAACATGGGCTC CCGCACCGGGACA CGCT TGCCCCGCCGCAG TTTTTCAATTTCCAC TERM 1146 986897 - 986879 - R 100 -16 -6.15828 | opp_overlap 986879 GGCAGCAAAAAAAAA GGCCACGC ATT GCGTGGCC TTTTTTGCCGAGTGA TERM 1147 986879 - 986897 + r 100 -16 -5.02074 | opp_overlap 986879 GGCAGCAAAAAAAAA GGCCACGC ATT GCGTGGCC TTTTTTGCCGAGTGA metQ 987717 - 986917 - | D-methionine ABC transporter, periplasmic D-methionine-binding lipoprotein metI 988396 - 987743 - | D-methionine ABC transporter, permease protein TERM 1148 988249 - 988271 + g 83 -15.6 -3.16564 | TACGGTTGAGCAGCG GGTTGGCCAG GAT CTGGCCAGCC TTGGTCACGTGCAGC metN 989420 - 988377 - | DL-methionine transporter ATP-binding subunit TERM 1149 988948 - 988980 + g 71 -11.2 -3.51934 | gap 1, overlap 988946 AGCAGTACCTTGGGG GCCGG-CGCCAGCGC CCGG GCGATGGCGACCCGC TGTTTCTGGCCACCG AHA_0916 989577 - 990347 + | hypothetical protein TERM 1150 990455 - 990398 - T 100 -20.7 -4.60889 | gap 1, opp_overlap 990413 990416, overlap 990411 AAGTAGGGTGAAAAA TGGGCGCTGAAAACACAAGAGGCCCGGC AAT GCCGGGCCTCTTGTGTTCACGACGGC-A TCATGCCGACTGGCG TERM 1151 990443 - 990411 - T 100 -27.9 -4.08064 | opp_overlap 990413 990416, overlap 990398 AATGGGCGCTGAAAA CACAAGAGGCCCGGC AAT GCCGGGCCTCTTGTG TTCACGACGGCATCA TERM 1152 990413 - 990441 + T 100 -24.7 -3.01791 | opp_overlap 990411 990398, overlap 990416 TGGGCGCTGAAAACA CAAGAGGCCCGGC AAT GCCGGGCCTCTTG TGTTCACGACGGCAT TERM 1153 990416 - 990438 + T 100 -20.6 -3.65812 | opp_overlap 990411 990398, overlap 990413 GCGCTGAAAACACAA GAGGCCCGGC AAT GCCGGGCCTC TTGTGTTCACGACGG AHA_0917 991214 - 990456 - | polyphosphate glucokinase TERM 1154 990646 - 990636 - G 73 -6.8 -4.27117 | GGGGGAGAACAGAAA CTCG AGG CGAG CCAGGTACTTGTTGA AHA_0918 992539 - 991298 - | iron-sulfur cluster-binding protein AHA_0919 992600 - 994111 + | YjeF protein TERM 1155 994481 - 994459 - g 71 -8.3 -3.86015 | overlap 994430 GAGTGGCCGGAGAAA GGGGAAGGC TGGCT GCCCGCCCC CGATCTCGACATTAC AHA_0920 994120 - 994593 + | hypothetical protein AHA_0921 994584 - 996149 + | N-acetylmuramoyl-L-alanine amidase mutL 996379 - 998247 + | DNA mismatch repair protein MutL TERM 1156 998340 - 998352 + G 75 -3.4 -4.91109 | TTTTACGTGGCTGAC TTGC CGACT GCAA TTTTTCTGATGGGGC TERM 1157 998553 - 998563 + G 78 -6.8 -4.57569 | CCTGCCGTGAGCTAT TCGG CGG CCGA TTTTTGCAAGGATGC miaA 998340 - 999257 + | tRNA delta(2)-isopentenylpyrophosphate transferase hfq 999328 - 999591 + | RNA chaperone Hfq TERM 1158 1000146 - 1000174 + G 79 -9.6 -4.1899 | gap 1 GCTGGAAACCGACCG TCGCC-TGTTGCG TGAG CGCATCAAGGCGA TTTTGCGTCGGCTCG AHA_0925 999655 - 1000941 + | GTP-binding protein HflX TERM 1159 1001098 - 1001112 + G 70 -10 -3.5393 | opp_overlap 1001098 GAACAACGGCAAGAA TCAGGG ACC CCCTGA TTTGGACGAGATGCT TERM 1160 1001112 - 1001098 - g 74 -10 -3.70751 | opp_overlap 1001098 GAACAACGGCAAGAA TCAGGG ACC CCCTGA TTTGGACGAGATGCT hflK 1001033 - 1002184 + | HflK protein hflC 1002188 - 1003072 + | HflC protein TERM 1161 1003118 - 1003089 - f 73 -10.7 -3.39784 | opp_overlap 1003094, overlap 1003087 1003094 CGAGTCGTAATAACA CCCAAGGGCCTGA TGAT TCAGGCCCTTTTG TTTGCCGGCCGGGGG TERM 1162 1003113 - 1003094 - f 87 -13.6 -3.24423 | opp_overlap 1003094, overlap 1003089 1003087 CGTAATAACACCCAA GGGCCTGA TGAT TCAGGCCC TTTTGTTTGCCGGCC TERM 1163 1003094 - 1003113 + F 100 -13.6 -4.86731 | opp_overlap 1003094 1003089 1003087 CGTAATAACACCCAA GGGCCTGA TGAT TCAGGCCC TTTTGTTTGCCGGCC AHA_0928 1003184 - 1003372 + | hypothetical protein TERM 1164 1003413 - 1003442 + T 100 -18.1 -3.30159 | opp_overlap 1003413 1003420, overlap 1003420 GTGTTTGCCAGACAA CAAAAAAGAGGCC CTTT GGCCTCTTTTTTG TTGTCCGCCGATTGG TERM 1165 1003442 - 1003413 - T 100 -18.1 -3.48276 | opp_overlap 1003413 1003420, overlap 1003420 GTGTTTGCCAGACAA CAAAAAAGAGGCC CTTT GGCCTCTTTTTTG TTGTCCGCCGATTGG TERM 1166 1003420 - 1003435 + T 100 -10.4 -5.55769 | opp_overlap 1003413 1003420, overlap 1003413 CCAGACAACAAAAAA GAGGCC CTTT GGCCTC TTTTTTGTTGTCCGC TERM 1167 1003435 - 1003420 - T 100 -10.4 -5.60689 | opp_overlap 1003420 1003413, overlap 1003413 CCAGACAACAAAAAA GAGGCC CTTT GGCCTC TTTTTTGTTGTCCGC AHA_0929 1004431 - 1003460 - | octaprenyl-diphosphate synthase rplU 1004674 - 1004985 + | ribosomal protein L21 rpmA 1005003 - 1005260 + | 50S ribosomal protein L27 TERM 1168 1005283 - 1005302 + F 100 -16.4 -5.35224 | opp_overlap 1005277 CCGCAAGGATCCGAA GCCCCGCC AACA GGCGGGGC TTTTGTTTTTCTGCA obgE 1005451 - 1006653 + | GTPase ObgE TERM 1169 1006722 - 1006701 - f 100 -15.9 -3.85698 | opp_overlap 1006701 CCCGGTGCTGAGAAA CCGGAGCCT TCCC AGGCTCCGG TTTTTTTTATGGGGA TERM 1170 1006701 - 1006722 + F 100 -15.9 -5.93809 | opp_overlap 1006701 CCCGGTGCTGAGAAA CCGGAGCCT TCCC AGGCTCCGG TTTTTTTTATGGGGA AHA_0933 1007048 - 1008418 + | membrane protein TERM 1171 1008440 - 1008459 + T 100 -10 -5.60993 | overlap 1008453 TCGCGCCTTGTCACA CGGTCAAC TTCG GTTGGCCG TTTTTTTATGGCCGA TERM 1172 1010326 - 1010298 - T 83 -12.6 -3.28924 | gap 1, opp_overlap 1010306, overlap 1010299 1010306 GAGTGGCGGTGACAA CGGAAAAAGGGCC TGCG GGCCCTTTTT-CG TCAGCGTCCAAGCGG TERM 1173 1010326 - 1010299 - T 75 -12.8 -2.57211 | opp_overlap 1010306, overlap 1010298 1010306 AGTGGCGGTGACAAC GGAAAAAGGGCC TGCG GGCCCTTTTTCG TCAGCGTCCAAGCGG TERM 1174 1010306 - 1010319 + T 95 -9.5 -4.72986 | opp_overlap 1010298 1010299 1010306 GTGACAACGGAAAAA GGGCC TGCG GGCCC TTTTTCGTCAGCGTC TERM 1175 1010319 - 1010306 - T 95 -9.5 -4.78149 | opp_overlap 1010306, overlap 1010298 1010299 GTGACAACGGAAAAA GGGCC TGCG GGCCC TTTTTCGTCAGCGTC AHA_0935 1010680 - 1010327 - | hypothetical protein AHA_0936 1011107 - 1010757 - | hypothetical protein AHA_0937 1014212 - 1011240 - | chemotaxis sensory transducer family protein TERM 1176 1011918 - 1011945 + g 70 -7.7 -4.07885 | gap 1 GCGCAGCCAGGTGCG GCTGGCGATGGC ATCCA GCC-TGGCCAGC TTTTCCGGCGCCATC TERM 1177 1012726 - 1012683 - G 70 -10.3 -3.54424 | overlap 1012685 GGCCAGCTCGCCAAA CAGGGCCTGCTGCCAG-CGGA TCTG TCCGGCCGGCAGC-GGCGCTT GGCGCCACAGCGCCT TERM 1178 1012724 - 1012685 - G 74 -12.9 -3.35046 | overlap 1012683 CCAGCTCGCCAAACA GGGCCTGCTGCCAG-CGGA TCTG TCCGGCCGGCAGC-GGCGC TTGGCGCCACAGCGC TERM 1179 1015263 - 1015320 + G 73 -10.8 -3.60792 | gap 3, opp_overlap 1015261, overlap 1015263 1015308 TGCTGGCGGAAACCC GGGC-C-GACGAG-CTGATGTTCAACGGT CCC ATCGTCGATCATCAGGCTCGTCTGCGCTC TTTCGAGATTGCCGC TERM 1180 1015263 - 1015318 + G 82 -14.8 -3.38314 | gap 1, opp_overlap 1015261, overlap 1015263 1015308 TGCTGGCGGAAACCC GGGCCGACGAG-CTGATGTTCAACGGT CCC ATCGTCGATCATCAGGCTCGTCTGCGC TCTTTCGAGATTGCC AHA_0938 1014368 - 1015357 + | flavin dependant oxidoreductase AHA_0939 1015593 - 1016093 + | helix-turn-helix domain-containing protein TERM 1181 1016112 - 1016144 + T 100 -22.1 -4.67982 | opp_overlap 1016117, overlap 1016117 GAGCGATGCACCATA AAAAACGGGCCCGGC AAT GCCGGGCCCGTTTTG TTTTATTGCCTGCCA TERM 1182 1016117 - 1016139 + T 100 -22 -5.27476 | opp_overlap 1016117, overlap 1016112 ATGCACCATAAAAAA CGGGCCCGGC AAT GCCGGGCCCG TTTTGTTTTATTGCC TERM 1183 1016139 - 1016117 - T 100 -22 -5.31877 | opp_overlap 1016117 1016112 ATGCACCATAAAAAA CGGGCCCGGC AAT GCCGGGCCCG TTTTGTTTTATTGCC apaH 1017080 - 1016259 - | diadenosine tetraphosphatase apaG 1017449 - 1017087 - | ApaG ksgA 1018269 - 1017454 - | dimethyladenosine transferase pdxA 1019266 - 1018271 - | 4-hydroxythreonine-4-phosphate dehydrogenase TERM 1184 1019149 - 1019096 - G 78 -15.1 -2.78384 | gap 1 CTGGTCGGCATCATA GGGCTGCAGCTCGA-TGGGCAGCCCC AGC AGGGCAGCCCGCTCGCGCAGCAGCGC CGGATCGGCGATCAC surA 1020564 - 1019266 - | peptidylprolyl cis-trans isomerase SurA AHA_0945 1023027 - 1020595 - | organic solvent tolerance protein TERM 1185 1022842 - 1022866 + g 71 -11.4 -3.42503 | TTCCACGGGTTGGGC GTTGGCGTCC TTGCC GGGCGCCAGC TTCTCAATCTTGGGG TERM 1186 1022987 - 1023018 + g 74 -5.8 -4.50976 | overlap 1022988 ACAAGGCTGATGGTC AGGGCGATGGGATA GGAG TATCCCAGTGTCCG TTTTGTCATGTGAAA AHA_0946 1023202 - 1024212 + | aminoglycoside phosphotransferase AHA_0947 1024209 - 1024877 + | nucleotidyltransferase family protein djlA 1024897 - 1025727 + | co-chaperone DjlA TERM 1187 1025740 - 1025786 + T 100 -15.5 -3.5511 | gap 2, opp_overlap 1025753, overlap 1025753 TGAGCGCCCCTTCGT CAGC-CATA-AAAAATGCCCGTC ACT GACGGGCATTTTTGTTTGCGCTG TGTTTGTGCGTCACG TERM 1188 1025753 - 1025771 + T 100 -14.6 -5.28942 | opp_overlap 1025753, overlap 1025740 GTCAGCCATAAAAAA TGCCCGTC ACT GACGGGCA TTTTTGTTTGCGCTG TERM 1189 1025771 - 1025753 - T 100 -14.6 -5.28176 | opp_overlap 1025753 1025740 GTCAGCCATAAAAAA TGCCCGTC ACT GACGGGCA TTTTTGTTTGCGCTG AHA_0949 1027147 - 1025804 - | xanthine/uracil permease family protein TERM 1190 1027390 - 1027373 - R 100 -9.9 -5.72622 | opp_overlap 1027373 GCCAGAAATAAAAAA GGTTCTC GCTG GAGAACC TTTTGCGTGGGCAGC TERM 1191 1027373 - 1027390 + r 83 -9.9 -4.18018 | opp_overlap 1027373 GCCAGAAATAAAAAA GGTTCTC GCTG GAGAACC TTTTGCGTGGGCAGC TERM 1192 1027824 - 1027807 - R 100 -12.7 -4.30987 | opp_overlap 1027807 ATCGGGCACAAGAAA GGGGAGC CTGG GCTCCCC TTGTGGCATGTGCCG TERM 1193 1027807 - 1027824 + r 84 -12.7 -3.34962 | opp_overlap 1027807 ATCGGGCACAAGAAA GGGGAGC CTGG GCTCCCC TTGTGGCATGTGCCG AHA_0950 1029578 - 1027911 - | putative ABC transporter ATP-binding protein TERM 1194 1028322 - 1028357 + g 70 -11.8 -3.14211 | GCTCGGGAACTCGTA GTTGCCGATGCGCAGG ATGT CCTGGCCGTCGGCGAC TTCCTCGAACACCGT TERM 1195 1028799 - 1028825 + g 73 -2.8 -4.72272 | overlap 1028811 ACGAGCCGCTTCCGT GCTGGCTTCCTG TGC CAGGCGGGCATC TTTTTGCTCCAGCCA TERM 1196 1029116 - 1029153 + g 73 -6.8 -4.30441 | gap 1 TCTGGGCATCCCAGG CCGGCAGGCGCAGGGCG TCGGC CGCGC-GCTCCAGCTGG TTTTCCATGTTGTGG TERM 1197 1029344 - 1029367 + g 70 -11.8 -3.13522 | gap 1, overlap 1029342 GCTCCGGATCCAGCT TCGGCT-CCTG CGG CAGGTAGCCGA TCTTGATGCCGGGCT TERM 1198 1029701 - 1029679 - H 80 -4.8 -5.00616 | opp_overlap 1029665 1029698, overlap 1029698 CCGGGTTCCAAAAAA CCCGTCGATT GTA AACCAATGGG CGAGGGGGGGCAAAG AHA_0951 1029819 - 1030394 + | Crp family transcriptional regulator AHA_0952 1030455 - 1030961 + | hypothetical protein TERM 1199 1031042 - 1031020 - T 100 -15.6 -4.73613 | opp_overlap 1031020 GGATTACCAAGAAAA GAAGCCGCCA CAG TGGCGGCCTC TTGGGTTCATCAGGC TERM 1200 1031020 - 1031042 + T 87 -13.4 -3.20723 | opp_overlap 1031020 GGATTACCAAGAAAA GAAGCCGCCA CAG TGGCGGCCTC TTGGGTTCATCAGGC mtnN-1 1031825 - 1031052 - | MTA/SAH nucleosidase TERM 1201 1031374 - 1031344 - G 89 -16.8 -3.41051 | overlap 1031345 CGACCGTGACGATAA CGGTCGGCCATGCC GAG GGCGCGGCCGACCA GCTCGGGATCGCCAG TERM 1202 1031373 - 1031345 - G 86 -18.1 -2.64416 | overlap 1031344 GACCGTGACGATAAC GGTCGGCCATGCC GAG GGCGCGGCCGACC AGCTCGGGATCGCCA AHA_0954 1032851 - 1031997 - | lytic transglycosylase, catalytic TERM 1203 1032841 - 1032815 - G 100 -8.8 -5.65177 | overlap 1032816 ACAGCGATAAAAAAA GCAGCAAAAACA GCC TGTTTTCGCTGG AACTCGACATGGATT TERM 1204 1032840 - 1032816 - G 83 -12.3 -3.9748 | overlap 1032815 CAGCGATAAAAAAAG CAGCAAAAACA GCC TGTTTTCGCTG GAACTCGACATGGAT AHA_0955 1033377 - 1033036 - | hypothetical protein TERM 1205 1033430 - 1033410 - R 73 -10.4 -3.39274 | overlap 1033413 AACAAGGAGAGAAGA GAAGGGCC TTGCT GGCCCCTC AGACGTCGAGGTGAT TERM 1206 1033427 - 1033413 - R 71 -8.5 -3.81548 | overlap 1033410 AAGGAGAGAAGAGAA GGGCC TTGCT GGCCC CTCAGACGTCGAGGT AHA_0956 1033617 - 1033429 - | hypothetical protein AHA_0957 1034753 - 1033815 - | HTH-type transcriptional regulator XapR xapA 1035084 - 1035911 + | purine nucleoside phosphorylase AHA_0959 1035937 - 1037196 + | nucleoside permease TERM 1207 1037216 - 1037233 + F 100 -14.1 -4.30719 | CCCATCCCTTGTTCC GGGGCGC TGCG GCGCCCC TTTCTTATCCCGACA deoC-1 1037259 - 1038062 + | deoxyribose-phosphate aldolase TERM 1208 1038043 - 1038055 + F 70 -9.1 -3.70853 | opp_overlap 1038035 GCAAGAAGCCGGTTG CTGCC GAC GGCAG TTATTGAATCATTCC TERM 1209 1038079 - 1038100 + F 85 -12.9 -3.54543 | TCATTCCCATCCAGT GCGGCGCCC GGCG GGGCGCCCC TTTGCACAGGTGCAT TERM 1210 1038796 - 1038823 + G 72 -4.1 -4.63592 | gap 1, overlap 1038775 1038797 GCTCGGCCTTGCCTA TCTG-GCGCTGT TTGCC ACGGCGCTCAGC TTCTTTTTGTTCCAG AHA_0961 1038119 - 1039030 + | hypothetical protein AHA_0962 1040049 - 1039036 - | putative nucleotide sugar epimerase TERM 1211 1039857 - 1039837 - G 76 -12.5 -3.53012 | overlap 1039840 CCGCCCCTCGGCAAA CAGGGCGGC CAT GCCGGCCTG GTCCGCCAGCTCGCC TERM 1212 1040315 - 1040300 - H 73 -10.4 -3.45832 | GAACCCCATAACGAA GCCCTG CGGA CAGGGC TCGCGCCCGCCAGAC AHA_0963 1040372 - 1040998 + | hypothetical protein TERM 1213 1041061 - 1041082 + T 100 -15.9 -3.32022 | opp_overlap 1041061 CGCCTTGCAAACAAA CAGAGCGCC TGAT GGCGCTCTG TTGCTATCTGCCGCA TERM 1214 1041082 - 1041061 - T 100 -15.9 -4.41348 | opp_overlap 1041061 CGCCTTGCAAACAAA CAGAGCGCC TGAT GGCGCTCTG TTGCTATCTGCCGCA hutD 1041892 - 1041104 - | hemin ABC transporter, ATP-binding protein HutD AHA_0965 1042935 - 1041907 - | iron chelate ABC transporter permease TERM 1215 1042590 - 1042540 - G 79 -11.1 -3.85698 | gap 1 CGCGCCGCCGAGAAA GGCGAGCAGGGGCAGCAGGCCGAT GCCG AGCAGGCT-CTGCCACTGCTGGCC GAGGGGGGCCAGCAG AHA_0966 1043774 - 1042935 - | ABC-type hemin transport system, periplasmic component TERM 1216 1043930 - 1043912 - H 80 -12.4 -3.34902 | overlap 1043910 CGCCATGACAGAACA GGGATGCC GCA GGCACCCC AAGGGAGAACCGATG AHA_0967 1043943 - 1044455 + | HuvX protein TERM 1217 1045025 - 1044970 - g 72 -11.8 -3.29461 | gap 2, opp_overlap 1044989, overlap 1044958 1044971 CAAGCGCGTCGACAA CGGCG--CCGAGCTGACCAGCCCGGC CGATGC GCCGGTCTGATCCGCGCGGATCGCCA GAATGACAAAACGGG AHA_0968 1044452 - 1045009 + | HutZ protein TERM 1218 1045063 - 1045032 - T 91 -17.4 -2.83271 | opp_overlap 1045037, overlap 1045037 GGATCGCCAGAATGA CAAAACGGGCAGCC CTGG GGCTGCCCGTTTTT TATGGACGGTTTTCC TERM 1219 1045058 - 1045037 - T 100 -17.3 -4.58466 | opp_overlap 1045037, overlap 1045032 GCCAGAATGACAAAA CGGGCAGCC CTGG GGCTGCCCG TTTTTTATGGACGGT TERM 1220 1045037 - 1045058 + T 100 -17.3 -5.24531 | opp_overlap 1045037 1045032 GCCAGAATGACAAAA CGGGCAGCC CTGG GGCTGCCCG TTTTTTATGGACGGT AHA_0969 1045484 - 1045080 - | putative lipoprotein AHA_0970 1046075 - 1045524 - | isochorismatase family protein TERM 1221 1045788 - 1045749 - G 72 -7.2 -4.18018 | overlap 1045772 GGTGTCGACGCAAAA GTCGGTGGCACA-GCCGC AGATGA GCAGCCTGT-CCACCGCC TGCTCCGCCAAGAGG AHA_0971 1047104 - 1046136 - | hypothetical protein hgpB 1047293 - 1049386 + | putative outer-membrane heme receptor TERM 1222 1049433 - 1049395 - f 75 -12.5 -2.56596 | gap 1, opp_overlap 1049406, overlap 1049406 GTTCTGATGAATGCA CACCACGACAA-GGGGCC TGCG GGCCCCTTTTTCATGGCG GGGACCGGGCCCCCG TERM 1223 1049421 - 1049406 - f 80 -11.8 -3.45849 | opp_overlap 1049406, overlap 1049395 TGCACACCACGACAA GGGGCC TGCG GGCCCC TTTTTCATGGCGGGG TERM 1224 1049406 - 1049421 + F 100 -11.8 -4.72272 | opp_overlap 1049406 1049395 TGCACACCACGACAA GGGGCC TGCG GGCCCC TTTTTCATGGCGGGG TERM 1225 1049493 - 1049479 - f 100 -12.8 -4.85782 | GCGGCCAAAAAGAAA CCCGCC GAA GGCGGG TGGAAGGATTGCAAC hcaT 1049675 - 1050814 + | major facilitator superfamily transporter phenyl propionate permease (PPP) family protein TERM 1226 1050859 - 1050876 + T 86 -12.7 -3.69395 | opp_overlap 1050859 ATCAGCAACGAAAAA GGGGAGC CTCG GCTCCCC TTGTTGCATGGTGAC TERM 1227 1050876 - 1050859 - T 100 -12.7 -4.90869 | opp_overlap 1050859 ATCAGCAACGAAAAA GGGGAGC CTCG GCTCCCC TTGTTGCATGGTGAC AHA_0974 1051108 - 1050899 - | hypothetical protein TERM 1228 1050988 - 1050998 + g 74 -4.6 -4.59773 | opp_overlap 1050982, overlap 1050984 AGAAGCGAACCGCCT TGGC ATG GCCG TTTTTCAGGATGGAG AHA_0975 1051727 - 1051116 - | hypothetical protein TERM 1229 1051406 - 1051392 - G 70 -10 -3.56643 | overlap 1051395 CCGATAGCCGCGAAA CAGCTG GAG CAGCTG CCACAGCATCAGCAT AHA_0976 1051947 - 1055447 + | proline sensor PrlS TERM 1230 1055473 - 1055498 + F 83 -6.2 -4.86902 | CCAGCCAGCAAGATC GGCACTTTCT GACACA AAAAAGTGCC TTTTCTTCTCGTTTG AHA_0977 1055820 - 1058429 + | chitinase A TERM 1231 1058448 - 1058470 + F 100 -13.4 -5.03314 | opp_overlap 1058447 1058444, overlap 1058449 CACCGTCAAACCCAT CGGGGCATGC CAG GCATGCCCCC TTTTTTCCCCATAAC TERM 1232 1058449 - 1058469 + F 100 -16.9 -3.61506 | opp_overlap 1058447 1058444, overlap 1058448 ACCGTCAAACCCATC GGGGCATGC CAG GCATGCCCC CTTTTTTCCCCATAA TERM 1233 1058758 - 1058731 - gf 81 -12.6 -3.01712 | CCGCCCTGCGCAAGA GCCTGCTGCTGG TGCG CCCGCTGCAGGC CGGCAACCAGGCGCC AHA_0978 1058502 - 1060880 + | putative metalloprotease TERM 1234 1060864 - 1060883 + GT 78 -2.8 -5.06735 | gap 1 CGGTCAATGGCATGC CGCT-GGCG GCG CGCTGAGTG TTTTTCTCCTTTCTC TERM 1235 1060922 - 1060941 + GT 83 -12.1 -3.72576 | ATGCGAGGTGCCACT GGCGGGG GCCAAG CCCCGCC TTTCATCAAGCAAGA AHA_0979 1060787 - 1062886 + | basic endochitinase TERM 1236 1062923 - 1062910 - T 100 -9.5 -5.4505 | opp_overlap 1062910 CCGCGCAATAAAAAA GGCCC GTCA GGGCC TTTTTCATGGGGTGA TERM 1237 1062910 - 1062923 + T 95 -9.5 -4.7373 | opp_overlap 1062910 CCGCGCAATAAAAAA GGCCC GTCA GGGCC TTTTTCATGGGGTGA AHA_0980 1063745 - 1062945 - | ribosomal RNA large subunit methyltransferase A, putative TERM 1238 1063828 - 1063813 - R 93 -10.4 -4.49981 | opp_overlap 1063813 GAGACGATCAGAAAA GGCTGC CGTG GCAGCC TTTTTTATCCGGCGA TERM 1239 1063813 - 1063828 + r 100 -10.4 -5.24129 | opp_overlap 1063813 GAGACGATCAGAAAA GGCTGC CGTG GCAGCC TTTTTTATCCGGCGA crp 1064509 - 1063871 - | cAMP-regulatory protein TERM 1240 1064245 - 1064264 + g 71 -5.6 -4.24948 | gap 1 AACCTTTGGCACGCA CCCAG-GCG GAA CGCTCCGGG TTTTCGCTCTCCTCG AHA_0982 1064626 - 1065225 + | chain A, structural Genomics AHA_0983 1065275 - 1065571 + | hypothetical protein TERM 1241 1065592 - 1065612 + T 100 -14 -4.28254 | opp_overlap 1065592 ATGGTGTGATGACAA CGGCCTGC TCAAT GCAGGCCG TTTTGCATATTGGGG TERM 1242 1065612 - 1065592 - T 95 -14 -3.40522 | opp_overlap 1065592 ATGGTGTGATGACAA CGGCCTGC TCAAT GCAGGCCG TTTTGCATATTGGGG AHA_0984 1066159 - 1065629 - | putative lipoprotein AHA_0985 1067044 - 1066175 - | phosphoribulokinase, plasmid TERM 1243 1067197 - 1067180 - R 100 -12.7 -5.1287 | CGCAGACGCAAAAAA GGGCTGC GGTG GCAGCCC TTGCGACAAGCAAAG AHA_0986 1067663 - 1067220 - | hypothetical protein AHA_0987 1068004 - 1067660 - | hypothetical protein arnT 1069647 - 1068004 - | 4-amino-4-deoxy-L-arabinose transferase AHA_0989 1070616 - 1069717 - | polysaccharide deacetylase family protein AHA_0990 1072600 - 1070609 - | bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase AHA_0991 1073577 - 1072597 - | undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase AHA_0992 1074720 - 1073584 - | UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase TERM 1244 1075324 - 1075297 - g 81 -13.4 -3.63991 | CATCATCGTCAACAA GTCGACCGTGCC GGTG GGCACCGCCGAC AAGGTGACCGCCAGG AHA_0993 1074941 - 1076287 + | UDP-glucose dehydrogenase TERM 1245 1076608 - 1076583 - T 100 -16.9 -5.18726 | opp_overlap 1076583 TGCTCACAATAAAAA TGGCCCTCCGC CAGT GCGGAAGGCCA TTTTTATTTTCTGAA TERM 1246 1076583 - 1076608 + T 100 -14.7 -5.54907 | opp_overlap 1076583 TGCTCACAATAAAAA TGGCCCTCCGC CAGT GCGGAAGGCCA TTTTTATTTTCTGAA AHA_0994 1076959 - 1076717 - | enolase AHA_0996 1077049 - 1078203 + | GGDEF family protein AHA_0995 1079267 - 1078185 - | alpha/beta hydrolase TERM 1247 1079234 - 1079200 - GT 100 -15 -4.39426 | overlap 1079202 1079205 GACAGGGGCAGAAAA GGCAACGGCGAGAAGC CGG GCTTCTCGCCGTCGGG ATCAGGCTGGCAGGC TERM 1248 1079232 - 1079202 - GT 100 -22 -2.53422 | overlap 1079200 1079205 CAGGGGCAGAAAAGG CAACGGCGAGAAGC CGG GCTTCTCGCCGTCG GGATCAGGCTGGCAG TERM 1249 1079229 - 1079205 - GT 100 -20.1 -3.41587 | overlap 1079202 1079200 GGGCAGAAAAGGCAA CGGCGAGAAGC CGG GCTTCTCGCCG TCGGGATCAGGCTGG AHA_0997 1080135 - 1079236 - | chemotaxis protein CheV AHA_0998 1080865 - 1080317 - | hypothetical protein AHA_0999 1081043 - 1081249 + | hypothetical protein slyD 1081396 - 1082034 + | FKBP-type peptidyl-prolyl cis-trans isomerase SlyD TERM 1250 1082061 - 1082077 + T 100 -15.1 -5.64274 | opp_overlap 1082061 CCGATGATAAAAAAA CCCGCGC CTG GCGCGGG TTTTTTTATGGCTGG TERM 1251 1082077 - 1082061 - T 100 -15.1 -5.67063 | opp_overlap 1082061 CCGATGATAAAAAAA CCCGCGC CTG GCGCGGG TTTTTTTATGGCTGG AHA_1001 1082314 - 1082099 - | hypothetical protein AHA_1002 1083297 - 1082329 - | vegetatible incompatibility protein HET-E-1 fkpA 1083417 - 1084223 + | FKBP-type peptidyl-prolyl cis-trans isomerase FkpA TERM 1252 1084236 - 1084267 + F 100 -16 -3.35679 | opp_overlap 1084243, overlap 1084243 TAAGCGGAAAACGTT GAAAAAACGGCTCC TTAG GGAGCCGTTTTTAC TTGTAACTCCGCCCG TERM 1253 1084243 - 1084260 + F 100 -12.7 -4.93968 | opp_overlap 1084243, overlap 1084236 AAAACGTTGAAAAAA CGGCTCC TTAG GGAGCCG TTTTTACTTGTAACT TERM 1254 1084260 - 1084243 - f 100 -12.7 -5.08011 | opp_overlap 1084236 1084243 AAAACGTTGAAAAAA CGGCTCC TTAG GGAGCCG TTTTTACTTGTAACT TERM 1255 1085062 - 1085097 + G 71 -8.8 -3.86015 | overlap 1085064 GCGCAGGGGGATCGC AAGGGGGCGGCCAGCC TGGC GGATGGCGGCACCCTG TTTCTGGACGAGATC TERM 1256 1085064 - 1085095 + G 71 -11.4 -3.51934 | overlap 1085062 GCAGGGGGATCGCAA GGGGGCGGCCAGCC TGGC GGATGGCGGCACCC TGTTTCTGGACGAGA TERM 1257 1085212 - 1085264 + G 78 -10.3 -4.08394 | opp_overlap 1085232 GAGACGGTGGACGTG CGCTTCGTCTGCGCCACCAACCGCG ATC CCCTGCTGGAGGTGAAGGCGGGGCG TTTTCGCGAGGATCT AHA_1004 1084375 - 1085781 + | sigma-54 factor interaction domain-containing protein TERM 1258 1085852 - 1085821 - T 100 -17.2 -3.85698 | opp_overlap 1085821 1085822, overlap 1085822 CTCCCGGGGGATAAA TGTGCGGGGCGGCC GATT GGCCGCCCCGCAGC GTTTGTGGCGGTCGC TERM 1259 1085821 - 1085853 + T 100 -19.2 -3.87994 | gap 1, opp_overlap 1085821 1085822, overlap 1085822 CTCCCGGGGGATAAA TG-TGCGGGGCGGCC GATT GGCCGCCCCGCAGCG TTTGTGGCGGTCGCT TERM 1260 1085851 - 1085822 - T 100 -20.7 -2.91276 | opp_overlap 1085821 1085822, overlap 1085821 TCCCGGGGGATAAAT GTGCGGGGCGGCC GATT GGCCGCCCCGCAG CGTTTGTGGCGGTCG TERM 1261 1085822 - 1085852 + T 100 -20.5 -2.92475 | gap 1, opp_overlap 1085822 1085821, overlap 1085821 TCCCGGGGGATAAAT G-TGCGGGGCGGCC GATT GGCCGCCCCGCAGC GTTTGTGGCGGTCGC AHA_1005 1086740 - 1085871 - | TPR repeat-containing protein AHA_1006 1087189 - 1086854 - | hypothetical protein TERM 1262 1087095 - 1087079 - G 71 -5.7 -4.30719 | overlap 1087080 1087082 GGCCGGCAGAATAAA CCAGCGG GCG CTGCCGG CCGCAACGGCGCGCA AHA_1007 1087657 - 1087316 - | hypothetical protein TERM 1263 1087721 - 1087704 - R 100 -14.1 -4.86001 | opp_overlap 1087694 AGTATGCCATAAAAA CGGCGCC CTCA GGCGCCG TTGCAACAGCTTGTG AHA_1008 1089582 - 1087744 - | 5'-nucleotidase/2',3'-cyclic phosphodiesterase TERM 1264 1088528 - 1088544 + g 100 -13.7 -4.44667 | ACGTTGGTCTGCTCG GTGCCGC TGA GCGGCAC TTTCTTCTTGGCCAC TERM 1265 1088900 - 1088933 + g 73 -6.7 -4.38154 | overlap 1088902 GTGACCATGATGATC TTGTTGGCACCCTTG GATT TGAGGGTGTCGACCA TTTTCTGGGCGGTCT TERM 1266 1089411 - 1089430 + g 72 -7.8 -4.1899 | opp_overlap 1089399 ACAGCTCCTGGCCGG TGGGCTGG ATCG CCAGCGCA TTTTCGGTCGGGTCG AHA_1009 1091356 - 1089815 - | EAL domain-containing protein TERM 1267 1090342 - 1090322 - G 74 -10.4 -3.76839 | gap 1, overlap 1090323 GAAGCTGAAGTGAAA GCGG-GGCG GCAG CGCCGCCGC ATGGGGGGCGAACTG TERM 1268 1091511 - 1091484 - R 100 -12 -4.70879 | opp_overlap 1091485 1091489, overlap 1091485 TGGAAATGCCAAAAA GCAAAGACGGCC CGCA GGCCGCCTTTGT TTGTCATCGCAGGAA TERM 1269 1091485 - 1091510 + r 100 -13.3 -3.96148 | opp_overlap 1091484 1091485, overlap 1091489 GGAAATGCCAAAAAG CAAAGACGGCC CGCA GGCCGCCTTTG TTTGTCATCGCAGGA TERM 1270 1091510 - 1091485 - R 100 -15.5 -3.41804 | opp_overlap 1091485 1091489, overlap 1091484 GGAAATGCCAAAAAG CAAAGACGGCC CGCA GGCCGCCTTTG TTTGTCATCGCAGGA TERM 1271 1091489 - 1091506 + r 87 -8.3 -4.59342 | opp_overlap 1091485 1091484, overlap 1091485 ATGCCAAAAAGCAAA GACGGCC CGCA GGCCGCC TTTGTTTGTCATCGC AHA_1010 1092389 - 1091535 - | import inner membrane translocase, subunit Tim44 TERM 1272 1092444 - 1092479 + H 72 -11.2 -3.06261 | gap 1, overlap 1092447 CTGCTTTGGCAAGCT CAGCGAGGCGCATGGCA GGC TGCC-TGTCCCTCGTTG TATTGCAGCTTGCGA TERM 1273 1092447 - 1092476 + H 70 -9.3 -3.67498 | gap 1, overlap 1092444 CTTTGGCAAGCTCAG CGAGGCGCATGGCA GGC TGCC-TGTCCCTCG TTGTATTGCAGCTTG AHA_1011 1092570 - 1092671 + | hypothetical protein dnaB 1092822 - 1094216 + | replicative DNA helicase AHA_1013 1094283 - 1094375 + | hypothetical protein AHA_1014 1094442 - 1094534 + | hypothetical protein TERM 1274 1094557 - 1094540 - f 75 -12.7 -2.64695 | overlap 1094539 TGACTACTAAGTAAG CCGGGAG CCTG CTCCCGG TATCCAGAAACAGTT alr-1 1094685 - 1095758 + | alanine racemase TERM 1275 1095785 - 1095800 + T 100 -11.8 -5.70829 | opp_overlap 1095785 GCCAAACGTCAAAAA GCCCCG TATG CGGGGC TTTTTTTATGATGTT TERM 1276 1095800 - 1095785 - T 100 -11.8 -4.70879 | opp_overlap 1095785 GCCAAACGTCAAAAA GCCCCG TATG CGGGGC TTTTTTTATGATGTT AHA_1016 1096120 - 1095872 - | putative ferredoxin yegQ 1097483 - 1096122 - | U32 family peptidase TERM 1277 1097724 - 1097708 - R 73 -5.1 -4.56597 | GTCGGCGGCCAAAAA TGGGC GGTTCAG GCCCA GCGAGAGAGGGGGGA AHA_1018 1098453 - 1097716 - | EAL domain-containing protein TERM 1278 1097771 - 1097792 + g 71 -9.5 -3.76775 | gap 1 TAGCCTTGCTGATAG TCGC-AACCG AGC CGGTTGGCGA TTTCGATGTGTTGCA TERM 1279 1099310 - 1099296 - g 78 -6.4 -4.67353 | TGATGGACGGAAAAA GAACTG TTC CAGTCC AACCAAAATTCATCT AHA_1019 1098706 - 1099428 + | hypothetical protein AHA_1020 1099458 - 1099937 + | adhesin major subunit pilin TERM 1280 1099963 - 1099983 + F 100 -14.7 -4.1399 | opp_overlap 1099950 AAGCCTTCCTTTCAA GGCTCCCTG CGA CAGGGGGCC TTTCTGTCTGCATCG AHA_1021 1100017 - 1102452 + | hypothetical protein AHA_1022 1102472 - 1103629 + | hypothetical protein TERM 1281 1103651 - 1103665 + T 95 -5.7 -5.28942 | opp_overlap 1103651, overlap 1103645 TGATATTGGTAAAAA GGGTT AAACC AACCC TTTTTCTTTGGCATA TERM 1282 1103665 - 1103651 - T 75 -6.4 -4.61231 | opp_overlap 1103651 1103645 TGATATTGGTAAAAA GGGTTA AAC CAACCC TTTTTCTTTGGCATA AHA_1023 1104292 - 1103654 - | LuxR family DNA-binding response regulator TERM 1283 1105254 - 1105264 + G 73 -3.2 -4.72497 | overlap 1105247 TCCCGTCTGCCTCCC CTCA GGC TGGG TTTTATTCCTGGGTG TERM 1284 1107167 - 1107177 + G 73 -6.8 -4.25104 | CGTCGAGGATCACCA CCTG AAT CAGG TTTTGGTGCAGCGCC AHA_1025 1104414 - 1107842 + | response regulator/sensor histidine kinase TERM 1285 1108224 - 1108196 - f 84 -13.2 -3.09028 | opp_overlap 1108197 1108202, overlap 1108202 TAGAAGTGTGAAAAG CGAAAACCCGGC ACTGG GCCGGGTTTTCT TGAATGATGGTGGAG TERM 1286 1108197 - 1108223 + F 100 -16.7 -3.10715 | opp_overlap 1108196 1108202, overlap 1108202 AGAAGTGTGAAAAGC GAAAACCCGGC ACTGG GCCGGGTTTTC TTGAATGATGGTGGA TERM 1287 1108218 - 1108202 - f 93 -10.8 -4.4267 | opp_overlap 1108197 1108202, overlap 1108196 TGTGAAAAGCGAAAA CCCGGC ACTGG GCCGGG TTTTCTTGAATGATG TERM 1288 1108202 - 1108218 + F 100 -10.8 -4.69053 | opp_overlap 1108202 1108196, overlap 1108197 TGTGAAAAGCGAAAA CCCGGC ACTGG GCCGGG TTTTCTTGAATGATG TERM 1289 1109047 - 1109057 + G 74 -2.4 -4.82901 | ACTTCAACGCCAATC TGGG GGG CCCC TTTTTCTCGGCCAGG TERM 1290 1109930 - 1109948 + G 83 -8 -4.56775 | opp_overlap 1109921, overlap 1109932 GTCAAACCGCTATAC CCCGGCCG AAA TGGCCGAG TTTTTGGGGCAGCAT AHA_1029 1108869 - 1110116 + | cysteine desulfurase family protein TERM 1291 1110119 - 1110149 + T 71 -8.2 -3.91196 | opp_overlap 1110124, overlap 1110124 1110126 TATGCCGCATTGAGA TAAAACAGCCCGGT TAT GCCGGGCTGTGTCG TTTCATATCTCTGCC TERM 1292 1110124 - 1110144 + T 91 -14.7 -3.05561 | opp_overlap 1110124, overlap 1110119 1110126 CGCATTGAGATAAAA CAGCCCGGT TAT GCCGGGCTG TGTCGTTTCATATCT TERM 1293 1110144 - 1110124 - T 100 -14 -4.55287 | opp_overlap 1110124 1110119 1110126 CGCATTGAGATAAAA CAGCCCGG TTATG CCGGGCTG TGTCGTTTCATATCT TERM 1294 1110126 - 1110142 + T 72 -11.5 -3.07629 | opp_overlap 1110124, overlap 1110124 1110119 CATTGAGATAAAACA GCCCGGT TAT GCCGGGC TGTGTCGTTTCATAT cheB-1 1111231 - 1110170 - | chemotaxis-specific methylesterase AHA_1031 1111712 - 1111242 - | chemoreceptor glutamine deamidase CheD cheR-1 1112526 - 1111723 - | CheR methyltransferase SAM binding domain-containing protein AHA_1033 1114751 - 1112583 - | methyl-accepting chemotaxis protein cheW-1 1115394 - 1114822 - | chemotaxis protein CheW TERM 1295 1115454 - 1115423 - R 73 -5 -4.56887 | gap 1, opp_overlap 1115424, overlap 1115424 TAAAAACGGACAAAA TCGGCCTCGTCAACC TGA GGTTG-CGCTGCCGT ATTGCCGTGCAGTGG AHA_1035 1117329 - 1115407 - | methyl-accepting chemotaxis protein TERM 1296 1115620 - 1115647 + g 85 -9.8 -4.31379 | overlap 1115621 CATCTCTTCGGCCGT GGCCGCCAGC TCCTCGCT GCTGGCGGCA TTTTGCTGGGTTACT TERM 1297 1115621 - 1115646 + g 73 -13.3 -3.18105 | overlap 1115620 ATCTCTTCGGCCGTG GCCGCCAGC TCCTCGCT GCTGGCGGC ATTTTGCTGGGTTAC TERM 1298 1115926 - 1115944 + g 71 -13.1 -3.05384 | GTGTTCACCGGCCCG CGCCGCC TCGAT GGCGGCG TTGAGTGCCAGCAGA cheA-1 1119558 - 1117345 - | chemotaxis protein CheA TERM 1299 1117811 - 1117799 - G 81 -7.7 -4.4648 | ACGCGCACCAGAAAA CCATC GAT GATGG CCAGAGTGAGCGGCA rsbV 1119911 - 1119585 - | anti-sigma-B factor antagonist AHA_1038 1120294 - 1119926 - | chemotaxis protein CheY AHA_1039 1121518 - 1120304 - | methyl-accepting chemotaxis protein, putative TERM 1300 1121049 - 1121077 + g 79 -10.9 -3.85698 | AGCTGGGCCTGGCTC TCGGCCAGCACGG CGG TCATGCCGGCCGA TTTCTCGCCGCCCAG TERM 1301 1121782 - 1121801 + r 87 -13.6 -3.26545 | opp_overlap 1121782 AGGAGGCAATGAAAA GAGCCTGC ATTG GCAGGCTC TTGGTGCTGTATGCG TERM 1302 1121801 - 1121782 - R 100 -13.6 -4.43879 | opp_overlap 1121782 AGGAGGCAATGAAAA GAGCCTGC ATTG GCAGGCTC TTGGTGCTGTATGCG AHA_1040 1122910 - 1121822 - | 3-oxoacyl-(acyl carrier protein) synthase III TERM 1303 1123073 - 1123087 + H 71 -10 -3.55761 | opp_overlap 1123063 1123058 CCACAGGGCTTGGCT GCCCTA AGA TAGGGC TTTCGCCACTGGATG AHA_1041 1123113 - 1124054 + | LysR family transcriptional regulator TERM 1304 1124074 - 1124094 + F 76 -10.5 -3.66556 | overlap 1124083 AGACGCTTGTGTTGG TCTATAGCC GTT GGCTATGGA TTCTATTCCCAACTT AHA_1042 1124090 - 1124791 + | amino acid transporter LysE AHA_1043 1124894 - 1126753 + | U32 family peptidase TERM 1305 1127442 - 1127409 - g 71 -8.1 -3.96148 | gap 1, opp_overlap 1127412 1127413, overlap 1127411 1127413 CCCCTCGATGAGAAA CAGA-CCCGGCACCTG TTG CAGGCGGCGGGCTTTG GCGTTGGTCGGCGCT TERM 1306 1127438 - 1127411 - g 70 -9.8 -3.57406 | gap 1, opp_overlap 1127412 1127413, overlap 1127409 1127413 CCTCGATGAGAAACA GACCCGGCACCTG TTG CAGGCGGCGGG-C TTTGGCGTTGGTCGG TERM 1307 1127437 - 1127413 - g 77 -13.5 -3.36228 | opp_overlap 1127413 1127412, overlap 1127411 1127409 TCGATGAGAAACAGA CCCGGCACCTG TTG CAGGCGGCGGG CTTTGGCGTTGGTCG AHA_1044 1126842 - 1127504 + | hypothetical protein AHA_1045 1127996 - 1127520 - | methylated-DNA--protein-cysteine methyltransferase AHA_1046 1129558 - 1127993 - | helix-turn-helix, AraC type:HhH-GPD:Ada, metal-binding:AlkA, N-terminal TERM 1308 1129693 - 1129670 - H 72 -2.2 -4.94058 | overlap 1129671 1129674 GCAATTGAAATAAAA CCGAGGCCGC GCCC GCGACTGCAG GGTATGAAAAACAGA AHA_1047 1129768 - 1130169 + | hypothetical protein TERM 1309 1130192 - 1130209 + T 100 -14.1 -4.41114 | opp_overlap 1130192 CGTTGCCATGAAAAA CGGGGCC GCGA GGCCCCG TTTGTTATCTGCTGG TERM 1310 1130209 - 1130192 - T 100 -14.1 -4.72272 | opp_overlap 1130192 CGTTGCCATGAAAAA CGGGGCC GCGA GGCCCCG TTTGTTATCTGCTGG AHA_1048 1131813 - 1130239 - | thermostable carboxypeptidase 1 AHA_1049 1132432 - 1131851 - | Smr domain-containing protein TERM 1311 1132549 - 1132585 + r 70 -9.3 -3.65603 | overlap 1132583 CAAAGGGGAGGCGAG GGCGGGATCAGGCGATC AGG GATCGCCTGACGCAGGC TTATTGGCCCTCTTT AHA_1050 1132771 - 1132586 - | hypothetical protein TERM 1312 1132903 - 1132869 - R 83 -12.7 -3.25823 | opp_overlap 1132869 1132890 GCCCTCCCATATCAA GACCCTGACGGGGCC GATGT GGCCCCGCCTGCGCC TTATTGGCGGGCCTG TERM 1313 1132869 - 1132903 + r 70 -9 -3.61715 | opp_overlap 1132869, overlap 1132890 GCCCTCCCATATCAA GACCCTGACGGGGCCG ATG TGGCCCCGCCTGCGCC TTATTGGCGGGCCTG AHA_1051 1133797 - 1132904 - | GumN protein TERM 1314 1134299 - 1134327 + r 76 -9.5 -3.81146 | opp_overlap 1134304, overlap 1134300 1134302 TTGGTGGGGATGAGA CGAGAGGCGACGA CGC TCGTCGTCACTCC TTGTTCCTTGCAGCA TERM 1315 1134300 - 1134326 + r 79 -13 -2.88366 | opp_overlap 1134304, overlap 1134299 1134302 TGGTGGGGATGAGAC GAGAGGCGACGA CGC TCGTCGTCACTC CTTGTTCCTTGCAGC AHA_1052 1135212 - 1134385 - | short-chain dehydrogenase/reductase TERM 1316 1135286 - 1135313 + r 85 -15.6 -2.52543 | opp_overlap 1135286 1135291, overlap 1135291 GCTGATCAGAAAAAA GAAAACCGGGCC AATC GGCCCGGTTTGC TAACTTCAACCACCT TERM 1317 1135313 - 1135286 - R 100 -15.6 -5.31275 | opp_overlap 1135286 1135291, overlap 1135291 GCTGATCAGAAAAAA GAAAACCGGGCC AATC GGCCCGGTTTGC TAACTTCAACCACCT TERM 1318 1135291 - 1135308 + r 100 -14.1 -3.794 | opp_overlap 1135286 1135291, overlap 1135286 TCAGAAAAAAGAAAA CCGGGCC AATC GGCCCGG TTTGCTAACTTCAAC TERM 1319 1135308 - 1135291 - R 100 -14.1 -5.49579 | opp_overlap 1135291 1135286, overlap 1135286 TCAGAAAAAAGAAAA CCGGGCC AATC GGCCCGG TTTGCTAACTTCAAC AHA_1053 1136776 - 1135331 - | putative outermembrane porin TERM 1320 1137249 - 1137230 - R 100 -10.7 -4.74406 | ACAAAAAAAGATAAA CCCCTGC GCGATG GCAGGGG CCGGGTAGGGGGCGC AHA_1054 1139220 - 1137283 - | methyl-accepting chemotaxis protein TERM 1321 1138588 - 1138626 + g 100 -14.6 -4.57569 | gap 1, opp_overlap 1138590 GGGGGGCACCTCGAA CAGGCCGAGCGG-CGGC AGGGCC GCCAACTGCTCGGCCTG TTTTTGCAGGGCTGC TERM 1322 1139287 - 1139333 + r 81 -14.4 -2.53263 | opp_overlap 1139299 AGCAGCAGAGATGGC GCTTTTATGACAGTCAGCCCGG CGG CCGGACTGACTGTCGAGGGGGC TGGCTTACGGCTGCG TERM 1323 1139321 - 1139299 - R 86 -15.6 -2.78384 | opp_overlap 1139287 GGCGCTTTTATGACA GTCAGCCCGG CGG CCGGACTGAC TGTCGAGGGGGCTGG AHA_1055 1140234 - 1139338 - | hypothetical protein TERM 1324 1140161 - 1140103 - G 82 -5.8 -4.83615 | gap 1 CATCCCGCAGAAAAA CAGCACCAGCCCCACCAG-CACCAGCG GCGACA CGCTGGTGACCCGGGAGGTGAGCGCCG CCAGCGAGGCCCACA TERM 1325 1140294 - 1140266 - R 100 -21.1 -4.80178 | opp_overlap 1140292, overlap 1140285 GATGAATGAACAAAA GGAGGGCCAGTCT AGC AGACCGGCCCTCC CTGATGGCCATACCT AHA_1056 1141831 - 1140329 - | GntP TERM 1326 1141358 - 1141319 - G 81 -13.4 -3.60296 | opp_overlap 1141319, overlap 1141322 GATGTCCACCCCAAA CAGGCCGGCCACACCGAG CGGG CCCGGGGTGGGCGGCACG GTATGGTGAGTCACC TERM 1327 1141355 - 1141322 - G 77 -15.9 -2.62613 | opp_overlap 1141319, overlap 1141319 GTCCACCCCAAACAG GCCGGCCACACCGAG CGGG CCCGGGGTGGGCGGC ACGGTATGGTGAGTC AHA_1057 1142772 - 1141828 - | NAD-dependent epimerase/dehydratase:Short-chain dehydrogenase/reductase SDR:3-beta hydroxysteroid dehydrogenase/isomerase:dTDP-4-dehydrorhamnose reductase AHA_1058 1143581 - 1142808 - | AP endonuclease AHA_1059 1144210 - 1143578 - | putative aldolase TERM 1328 1143974 - 1143991 + g 71 -11.3 -3.53224 | opp_overlap 1143970 GTTGTGATAGATGGC GAGGTGG AAGG CCACCTC TTTGGAGGGGCGATC AHA_1060 1145453 - 1144203 - | YgbK domain-containing protein AHA_1061 1146358 - 1145450 - | 6-phosphogluconate dehydrogenase AHA_1062 1146614 - 1147405 + | DeoR family transcriptional regulator TERM 1329 1147520 - 1147492 - T 100 -19 -3.30474 | GCCTAGAACGAGCAA GGGGTTGGCATC GTGAT GATGCCAACCCC GGGATTCGGCAGACA TERM 1330 1147606 - 1147632 + T 75 -13 -2.52015 | opp_overlap 1147602, overlap 1147605 CGTCTGATGAAGGTG GCTGGGTTGCTT CCC AAGCTGCCCAGC GTTCATCGCTATCAG AHA_1063 1150480 - 1147784 - | hypothetical protein TERM 1331 1148476 - 1148465 - G 74 -5.8 -4.40804 | CAGCACGGTAGAAAA GACG ATCT CGTC GCACTCGCGCCCCTG TERM 1332 1149748 - 1149698 - G 70 -10 -3.61715 | gap 3, opp_overlap 1149698 1149699 CAGGTTGGCGAAGAA GGCCTCGCGGTTATCCTTGTTGCCA AGCT TGGCAACAAGG-TAGCC-C-AGACC GCATTTCTCCAGCTT TERM 1333 1152628 - 1152640 + G 76 -7.7 -4.3739 | GCGTGATTATCTCAA GTTGG GCG CCAAC TTTTATACCCCACTG AHA_1064 1151726 - 1154476 + | invasin family protein AHA_1065 1154664 - 1155332 + | hypothetical protein AHA_1066 1155644 - 1157251 + | intimin/invasin family protein TERM 1334 1157332 - 1157295 - f 95 -14.3 -3.4052 | opp_overlap 1157292 1157291, overlap 1157296 GTTGAATGCAACTAA CCGGTGATAGTGGTGAT AGTG ATCACCACTATCACCTT CAAATTTGTGCTGTA TERM 1335 1157331 - 1157296 - f 95 -17.8 -2.63991 | opp_overlap 1157292 1157291, overlap 1157295 TTGAATGCAACTAAC CGGTGATAGTGGTGAT AGTG ATCACCACTATCACCT TCAAATTTGTGCTGT AHA_1067 1157771 - 1158517 + | hypothetical protein TERM 1336 1159202 - 1159212 + G 75 -4 -4.7908 | CATTTGCATTAATCT TGAT GGC ATCA TTTATTTGTCTTTTT TERM 1337 1159404 - 1159388 - g 75 -3.7 -4.67607 | TGCGGAAGAAAGAAA CACATAT TAT ACATGCG CTGCAGAAAACGGTA AHA_1068 1158514 - 1160730 + | sensory box/GGDEF family protein AHA_1069 1161820 - 1161152 - | transcriptional regulator TERM 1338 1162470 - 1162486 + H 73 -5.3 -4.56775 | ATTGTATCGTCATTG TAAATTA AAA TAATTTA TTTTTGAGAGCAAAT TERM 1339 1162666 - 1162656 - H 86 -4 -5.30189 | GAGAAGATGAAAAAA CAAT GAA ATTG CCATGTCAATAGAGT AHA_1070 1162913 - 1163206 + | transcriptional activator protein AHA_1071 1163766 - 1163620 - | hypothetical protein TERM 1340 1164098 - 1164056 - R 100 -14.2 -4.56597 | opp_overlap 1164060, overlap 1164059 1164060 1164063 GGGCGGGGCCAAAAA CGAGCAAGGGGTTGGCACCA TGA TGATGCCAACCCCTTGTTTT GTATGGCGTTCCCGA TERM 1341 1164095 - 1164059 - R 100 -20.3 -3.23708 | opp_overlap 1164060, overlap 1164056 1164060 1164063 CGGGGCCAAAAACGA GCAAGGGGTTGGCACCA TGA TGATGCCAACCCCTTGT TTTGTATGGCGTTCC TERM 1342 1164060 - 1164094 + r 100 -21.6 -4.55118 | opp_overlap 1164059 1164056 1164060 1164063 GGGGCCAAAAACGAG CAAGGGGTTGGCACCA TGA TGATGCCAACCCCTTG TTTTGTATGGCGTTC TERM 1343 1164094 - 1164060 - R 100 -23.8 -2.53903 | opp_overlap 1164060, overlap 1164059 1164056 1164063 GGGGCCAAAAACGAG CAAGGGGTTGGCACCA TGA TGATGCCAACCCCTTG TTTTGTATGGCGTTC TERM 1344 1164091 - 1164063 - R 100 -19.7 -3.4158 | opp_overlap 1164060, overlap 1164060 1164059 1164056 GCCAAAAACGAGCAA GGGGTTGGCACCA TGA TGATGCCAACCCC TTGTTTTGTATGGCG AHA_1072 1165459 - 1164200 - | protein UmuC AHA_1073 1165883 - 1165440 - | protein UmuD AHA_1074 1166357 - 1168504 + | hypothetical protein TERM 1345 1168626 - 1168637 + GF 85 -5.8 -5.01811 | ACTTGCCTCACTCTA CCGA ACCA TCGG TTTTTCATTTGCTAG AHA_1075 1168501 - 1170042 + | hypothetical protein TERM 1346 1173168 - 1173186 + GT 77 -2.4 -5.0133 | gap 1, overlap 1173169 TTGCAATCTCATCTT C-GGCAG TTGATC CTGCCTG TTTTTTGGGGGGGTG AHA_1076 1169945 - 1175374 + | hypothetical protein TERM 1347 1175415 - 1175383 - T 91 -14.9 -3.01688 | opp_overlap 1175385, overlap 1175380 AAAATAATAGAATGA TTTCCCCCAGACCAT AAA ATGGTCTGGGGGATG GTGTCACGTGCGTTA TERM 1348 1175385 - 1175413 + T 100 -21.9 -2.63715 | opp_overlap 1175383 1175380 AATAATAGAATGATT TCCCCCAGACCAT AAA ATGGTCTGGGGGA TGGTGTCACGTGCGT AHA_1077 1176750 - 1175428 - | modification methylase DdeI AHA_1078 1180091 - 1178163 - | hypothetical protein TERM 1349 1179729 - 1179756 + g 74 -2.6 -4.87665 | gap 1 CAATGAGGTAAGGCG CTGC-TGGCCGTC GAT GATGGCCTTGAAG TTTTTATAACTGGCA TERM 1350 1180122 - 1180153 + r 100 -19 -3.49951 | opp_overlap 1180122 GAGATTGTAAAGAAA GTCACTGAATCAGA ATTT TCTGATTCAGTGAC TTGTATCAAACTATC TERM 1351 1180153 - 1180122 - R 100 -19 -4.45117 | opp_overlap 1180122 GAGATTGTAAAGAAA GTCACTGAATCAGA ATTT TCTGATTCAGTGAC TTGTATCAAACTATC AHA_1079 1180763 - 1180233 - | putative DNA repair protein RadC AHA_1080 1181935 - 1181510 - | hypothetical protein AHA_1081 1182302 - 1181955 - | hypothetical protein TERM 1352 1182345 - 1182364 + r 84 -13.6 -3.06183 | opp_overlap 1182345, overlap 1182347 TGGCAGAAATGAAAA GAGGAGGC AAAT GCCTCCTC TTGGATGGGAATGGA TERM 1353 1182364 - 1182345 - R 100 -13.6 -4.61873 | opp_overlap 1182345 1182347 TGGCAGAAATGAAAA GAGGAGGC AAAT GCCTCCTC TTGGATGGGAATGGA AHA_1082 1182835 - 1182386 - | hypothetical protein AHA_1083 1183171 - 1182848 - | hypothetical protein AHA_1084 1183418 - 1183768 + | helix-turn-helix domain-containing protein TERM 1354 1183783 - 1183812 + T 71 -5.7 -4.258 | gap 1, overlap 1183774 1183784 1183796 ATCATCCACCATTCA CTGGGGAG-GGGAT GGG GTCCCTTTCCCCAA TTTGTTGGTGAGTGG AHA_1085 1184619 - 1183780 - | hypothetical protein AHA_1086 1185746 - 1184757 - | hypothetical protein TERM 1355 1185763 - 1185821 + r 89 -13.9 -3.64703 | gap 1, opp_overlap 1185772 1185773, overlap 1185773 ACTATTCCTTGTTGA CGGCATAAATGGCGACGCCCGGATTGGC TTGT GCCAGTCCGGGTGAGGTCG-TTATGCGG TTTGAATAGGGAAGA TERM 1356 1185773 - 1185812 + r 81 -14.2 -2.6348 | opp_overlap 1185773 1185772, overlap 1185763 GTTGACGGCATAAAT GGCGACGCCCGGATTGGC TTGT GCCAGTCCGGGTGAGGTC GTTATGCGGTTTGAA AHA_1087 1186791 - 1185841 - | hypothetical protein TERM 1357 1187023 - 1186981 - R 100 -13.5 -4.57569 | opp_overlap 1186985, overlap 1186984 1186985 1186988 GTACGGGGCCAAAAA CGACCAAGGGGTTGGCATC GTAAT GATGCCAACCCCTTGTTTT ATATGGCGCTCCCGA TERM 1358 1187020 - 1186984 - R 100 -19.6 -3.23708 | opp_overlap 1186985, overlap 1186981 1186985 1186988 CGGGGCCAAAAACGA CCAAGGGGTTGGCATC GTAAT GATGCCAACCCCTTGT TTTATATGGCGCTCC TERM 1359 1187019 - 1186985 - R 100 -23.1 -2.53903 | opp_overlap 1186985, overlap 1186984 1186981 1186988 GGGGCCAAAAACGAC CAAGGGGTTGGCATC GTAAT GATGCCAACCCCTTG TTTTATATGGCGCTC TERM 1360 1186985 - 1187019 + r 100 -23.8 -4.53303 | opp_overlap 1186985 1186984 1186981 1186988 GGGGCCAAAAACGAC CAAGGGGTTGGCATCG TAA TGATGCCAACCCCTTG TTTTATATGGCGCTC TERM 1361 1187016 - 1186988 - R 100 -19 -3.4158 | opp_overlap 1186985, overlap 1186985 1186984 1186981 GCCAAAAACGACCAA GGGGTTGGCATC GTAAT GATGCCAACCCC TTGTTTTATATGGCG AHA_1089 1188308 - 1187154 - | hypothetical protein AHA_1090 1188389 - 1189123 + | hypothetical protein AHA_1091 1189139 - 1189570 + | hypothetical protein TERM 1362 1189620 - 1189602 - T 100 -16 -4.09822 | opp_overlap 1189602 AATGGACGACAGAAA GGCGACCC GAT GGGTCGCC TTTTTCATTGGCGGT TERM 1363 1189602 - 1189620 + T 100 -16 -4.86621 | opp_overlap 1189602 AATGGACGACAGAAA GGCGACCC GAT GGGTCGCC TTTTTCATTGGCGGT pheA 1190843 - 1189671 - | chorismate mutase/prephenate dehydratase TERM 1364 1190906 - 1190891 - R 100 -6.1 -6.06723 | opp_overlap 1190890 GGCTGCAAAAAAAAA CCTCC GCTAGG GGAGG CTCGATTCGTCTTTG AHA_1093 1191012 - 1190965 - | Phe leader peptide AHA_1094 1191186 - 1191785 + | hydrolase AHA_1095 1191811 - 1192089 + | hypothetical protein TERM 1365 1192100 - 1192110 + F 70 -6.8 -4.18702 | TCTGATTTATCCCTG CCCT TTA AGGG TTTATTCAGGATTGT TERM 1366 1192681 - 1192730 + G 86 -13.6 -3.85698 | gap 2, opp_overlap 1192680 1192681 TACGGCTTCAACAAG CGTCAGCTCGGGC-GCTG-GGGCA AGAG TGCCCACGGCTGCCTGAGCTACCG TTTCTCCGACCCCGA AHA_1096 1192135 - 1193007 + | hypothetical protein AHA_1097 1193103 - 1193651 + | hypothetical protein TERM 1367 1193662 - 1193686 + F 74 -10.7 -3.53444 | opp_overlap 1193664 1193666, overlap 1193656 1193664 GCTGATCCCTCATGC AACAGGCTCCT GCA GGGAGCCTGTC TTGATTGTTAACCCG TERM 1368 1193684 - 1193664 - f 81 -12.6 -3.05816 | opp_overlap 1193662 1193656 1193664, overlap 1193666 TGATCCCTCATGCAA CAGGCTCC TGCAG GGAGCCTG TCTTGATTGTTAACC TERM 1369 1193664 - 1193684 + F 88 -13.3 -3.34089 | opp_overlap 1193664 1193666, overlap 1193662 1193656 TGATCCCTCATGCAA CAGGCTCCT GCA GGGAGCCTG TCTTGATTGTTAACC AHA_1098 1193836 - 1194465 + | hypothetical protein TERM 1370 1194495 - 1194514 + F 100 -12.2 -5.37593 | GTGTCTTCATTTTTA CCCATGAC TTCG GTCATGGG TTTTTTCATTTCCGG AHA_1099 1194638 - 1195582 + | hypothetical protein AHA_1100 1195646 - 1196533 + | MerR family transcriptional regulator TERM 1371 1196867 - 1196896 + G 74 -14.9 -2.6063 | overlap 1196862 1196863 TGCGCCGGGACCAGG CCGTCAGCGCCGC GCTG GCGGAGCAGACGG TGGGTTGTCACTGGC TERM 1372 1197708 - 1197726 + G 72 -11.6 -3.38201 | opp_overlap 1197682, overlap 1197706 1197709 GTGGGCGGCGGGCAC CGGCGCCG ATG CGGCGCCC TATTTCCGGGTGTTC TERM 1373 1197709 - 1197725 + G 77 -15.1 -2.62439 | opp_overlap 1197682, overlap 1197708 1197706 TGGGCGGCGGGCACC GGCGCCG ATG CGGCGCC CTATTTCCGGGTGTT phrB 1196530 - 1197951 + | deoxyribodipyrimidine photolyase AHA_1102 1197953 - 1198381 + | putative transcriptional regulator TERM 1374 1198686 - 1198713 + G 74 -4.7 -4.60487 | opp_overlap 1198683 1198684, overlap 1198695 CATCGAGACCAACCT GGTTGCCACCG GTCATG CGCTGGCCGCC TTTTTGCCGCTGCTC AHA_1103 1198378 - 1199115 + | short chain dehydrogenase/reductase family oxidoreductase TERM 1375 1199394 - 1199383 - g 70 -7.2 -4.07568 | overlap 1199368 1199384 GCTTCTCGGTGAAAA GCCC GCAG GGGC TGGAGTACAACGGCC AHA_1104 1199112 - 1200371 + | amino-oxidase AHA_1105 1200368 - 1201150 + | plasmid partition ParA protein AHA_1106 1201150 - 1202406 + | cyclopropane-fatty-acyl-phospholipid synthase TERM 1376 1202464 - 1202506 + F 95 -9.6 -4.73682 | overlap 1202468 GGTTGCTGGCGGTGA AGTGGCAGCAGCCGGGCCCG CTG CTGGCACTGCTGCTGCTTCA TTTTCTCTTCTCCCC TERM 1377 1202468 - 1202502 + F 100 -15.6 -3.83346 | overlap 1202464 GCTGGCGGTGAAGTG GCAGCAGCCGGGCCCG CTG CTGGCACTGCTGCTGC TTCATTTTCTCTTCT AHA_1107 1202885 - 1203103 + | hypothetical protein TERM 1378 1203272 - 1203257 - g 72 -11.8 -3.39327 | opp_overlap 1203252 CCTTTACAGCGAGAA CGGCCG CTAT CGGCCG GGTCACTATCCTCAG AHA_1108 1203120 - 1203611 + | hypothetical protein AHA_1109 1203611 - 1204168 + | putative lipoprotein AHA_1110 1204293 - 1204760 + | DPS family protein TERM 1379 1204944 - 1204962 + F 100 -13.1 -5.95286 | TTTATCCACCCGCTT GCCGCCC TGTTT GGGCGGC TTTTTTGTTTTTGAT AHA_1111 1205088 - 1206737 + | hydroxylamine reductase TERM 1380 1206783 - 1206802 + F 100 -15 -5.40072 | ATGTTGTAAGCCTTT GGCGAGCC TGAT GGCTCGCC TTTTTTTAACGACCC AHA_1112 1206852 - 1207871 + | iron-sulfur cluster-binding protein galE-1 1207957 - 1208982 + | UDP-glucose 4-epimerase TERM 1381 1209138 - 1209109 - T 89 -16.5 -2.50016 | opp_overlap 1209114, overlap 1209114 TTGCAGCATGAATAG CAAAACGCCCCGG CATG CCGGGGCGTTTTT TTATGTGCCGGAACG TERM 1382 1209114 - 1209133 + T 100 -16.4 -5.71712 | opp_overlap 1209109 1209114 GCATGAATAGCAAAA CGCCCCGG CATG CCGGGGCG TTTTTTTATGTGCCG TERM 1383 1209133 - 1209114 - T 100 -16.4 -4.44797 | opp_overlap 1209114, overlap 1209109 GCATGAATAGCAAAA CGCCCCGG CATG CCGGGGCG TTTTTTTATGTGCCG AHA_1114 1209906 - 1209157 - | outer membrane protein TERM 1384 1209768 - 1209781 + g 72 -3.7 -4.57569 | CGTTGGACATCTCGA CCAGG ATTT CCGGG TTTTTGACCAGATAG AHA_1115 1209933 - 1210028 + | hypothetical protein TERM 1385 1210202 - 1210235 + F 91 -14.7 -3.07043 | opp_overlap 1210209, overlap 1210209 CCGCCATTTATTCAG CCAGAAAGGCCATCC GAAA GGATGGCCTTTTTGC TATTCAAATCCTCGC TERM 1386 1210209 - 1210228 + F 100 -13.6 -4.87626 | opp_overlap 1210209, overlap 1210202 TTATTCAGCCAGAAA GGCCATCC GAAA GGATGGCC TTTTTGCTATTCAAA TERM 1387 1210228 - 1210209 - f 100 -13.6 -3.92869 | opp_overlap 1210209 1210202 TTATTCAGCCAGAAA GGCCATCC GAAA GGATGGCC TTTTTGCTATTCAAA TERM 1388 1211196 - 1211211 + G 71 -4.6 -4.40358 | opp_overlap 1211196 GCACCCAACAGCAAT GGCTCT CTGC AGTGCC TTTTATCAGCTGGCT AHA_1117 1210730 - 1211524 + | transcriptional activator protein AhyR/asaR AHA_1118 1211755 - 1212273 + | HcpA-like protein TERM 1389 1212308 - 1212360 + F 71 -8.1 -3.87641 | GTTATTCCTTGTAGT GCACCCCATGGCCTGACGATGGCAG TGC CAGCCGTCGTCAGGCCCGTGCAAGC TTTCTCCGACCTGTT TERM 1390 1212363 - 1212395 + F 83 -6.2 -4.89567 | overlap 1212364 GGCCCGTGCAAGCTT TCTCCGACCTGTTC AGCTG GATGAGGTCGGAGC TTTTGTGTTTTGCCA TERM 1391 1212364 - 1212394 + F 71 -9.7 -3.52656 | overlap 1212363 GCCCGTGCAAGCTTT CTCCGACCTGTTC AGCTG GATGAGGTCGGAG CTTTTGTGTTTTGCC AHA_1119 1212752 - 1215535 + | Rhs element Vgr protein AHA_1120 1215532 - 1216332 + | type III secretion protein AHA_1121 1216332 - 1218284 + | hypothetical protein AHA_1122 1218284 - 1218982 + | hypothetical protein AHA_1123 1219157 - 1219858 + | hypothetical protein TERM 1392 1219940 - 1219977 + T 100 -17.1 -4.35044 | opp_overlap 1219946, overlap 1219946 CGAAATAATACGGTG CCAAAACCCCCATCAGC TTAT GCCGATGGGGGTTTTTG TTTGTCTTTCAATGA TERM 1393 1219971 - 1219946 - T 100 -16.9 -4.09511 | opp_overlap 1219940 1219946 AATACGGTGCCAAAA CCCCCATCAGC TTAT GCCGATGGGGG TTTTTGTTTGTCTTT TERM 1394 1219946 - 1219971 + T 100 -14.7 -5.48623 | opp_overlap 1219946, overlap 1219940 AATACGGTGCCAAAA CCCCCATCAGC TTAT GCCGATGGGGG TTTTTGTTTGTCTTT AHA_1124 1220870 - 1219986 - | LysR family transcriptional regulator budA 1220980 - 1221759 + | alpha-acetolactate decarboxylase alsS 1221787 - 1223457 + | acetolactate synthase TERM 1395 1223497 - 1223532 + T 100 -29.2 -3.61398 | opp_overlap 1223499 GCGGTCCGCCCAACG CAGAGCGCCCCTTGCC AATC GGCAAGGGGCGCTCTG TTATTGCGAAAGGAA TERM 1396 1223530 - 1223499 - T 100 -26 -2.52464 | opp_overlap 1223497 GGTCCGCCCAACGCA GAGCGCCCCTTGCC AATC GGCAAGGGGCGCTC TGTTATTGCGAAAGG AHA_1127 1224129 - 1223551 - | 4-methyl-5(B-hydroxyethyl)-thiazole monophosphate biosynthesis enzyme TERM 1397 1223779 - 1223750 - G 70 -7.8 -4.07687 | AGCTGTGCCTGAAAA GCGGGATGGCAG GTGGCG CTGGCATCCCCC AGCAGATCGTGGTGC TERM 1398 1223926 - 1223895 - G 74 -13 -3.30124 | gap 1 GCGTATCGCGGATAA CCTCGCTGCCGGGCA GGC CGCCCGGCA-CGACG ATGGCCTCGAACTCC panE 1225110 - 1224163 - | 2-dehydropantoate 2-reductase AHA_1129 1225468 - 1225950 + | nucleotide-binding protein TERM 1399 1225960 - 1225980 + T 91 -14.7 -3.01712 | GACTGATGATGGCCG GGGGAGGGC ACG GCTCTCCCC TGTTGCCGGCAGCAA TERM 1400 1226034 - 1226000 - T 78 -13.9 -2.56596 | gap 1, opp_overlap 1226008, overlap 1226008 GCCGGCAGCAAGCCA TA-AAAAAACCGGAGC AGCA GCTCCGGTTTTTTGTA TCCCTGATACCCGTT TERM 1401 1226025 - 1226008 - T 100 -12.7 -5.66684 | opp_overlap 1226008, overlap 1226000 CAAGCCATAAAAAAA CCGGAGC AGCA GCTCCGG TTTTTTGTATCCCTG TERM 1402 1226008 - 1226025 + T 100 -12.7 -5.38047 | opp_overlap 1226008 1226000 CAAGCCATAAAAAAA CCGGAGC AGCA GCTCCGG TTTTTTGTATCCCTG AHA_1130 1226895 - 1226053 - | outer membrane protein AHA_1131 1228431 - 1227052 - | muropeptide permease AmpG TERM 1403 1228931 - 1228961 + r 70 -6.8 -4.14627 | opp_overlap 1228912 GCCGGCGACCCAGCG CGCGGGGTGG CGGAATGTGAT CCGCTCCGCG TTATTTGTCTGCCAG AHA_1132 1229513 - 1228962 - | peptidyl-prolyl cis-trans isomerase B AHA_1133 1230101 - 1229529 - | hypothetical protein AHA_1134 1231268 - 1230126 - | putative ribosomal RNA small subunit methyltransferase D (rRNA (guanine-N(2)-)-methyltransferase) AHA_1135 1231475 - 1231783 + | BolA protein nqrA 1232225 - 1233568 + | Na(+)-translocating NADH-quinone reductase subunit A nqrB 1233572 - 1234801 + | Na(+)-translocating NADH-quinone reductase subunit B nqrC 1234791 - 1235579 + | Na(+)-translocating NADH-quinone reductase subunit C nqrD 1235572 - 1236204 + | NADH:ubiquinone oxidoreductase, Na(+)-translocating, D subunit nqrE-1 1236208 - 1236804 + | Na(+)-translocating NADH-quinone reductase subunit E TERM 1404 1238031 - 1238018 - g 76 -6.7 -4.4261 | opp_overlap 1238017 TGTTGAAGACGAAAA CATCC TGCT GGATG ACTTTGGTGGTTAAT nqrF 1236822 - 1238045 + | Na(+)-translocating NADH-quinone reductase subunit F TERM 1405 1238071 - 1238090 + G 100 -13.6 -5.10461 | opp_overlap 1238069 1238068 GTGTTGTAAAGACCT GGCTAGCC TTCG GGCTAGCC TTTTTCTTGACTGGG AHA_1142 1238049 - 1239089 + | thiamine biosynthesis lipoprotein ApbE AHA_1143 1239101 - 1239325 + | hypothetical protein TERM 1406 1239395 - 1239372 - T 95 -18.2 -2.59431 | opp_overlap 1239372, overlap 1239368 GTGCCGGATAAGCGA CGGGCTGACC TGAT GGTCAGCCCG TTTTTTTTGCAAAAG TERM 1407 1239372 - 1239395 + T 100 -18.2 -5.75342 | opp_overlap 1239372 1239368 GTGCCGGATAAGCGA CGGGCTGACC TGAT GGTCAGCCCG TTTTTTTTGCAAAAG AHA_1144 1239625 - 1239413 - | hypothetical protein dinB 1239758 - 1240810 + | DNA polymerase IV AHA_1146 1240879 - 1243020 + | methyl-accepting chemotaxis protein TERM 1408 1243056 - 1243034 - f 100 -11.3 -5.56673 | gap 1 AGGGATAAGAAAAAA GGCGCCATCC AACC GGA-GGCGCC AAACACATTCAGATG gcvA 1243304 - 1244224 + | DNA-binding transcriptional activator GcvA AHA_1148 1244217 - 1244855 + | esterase/lipase/thioesterase family protein AHA_1149 1244888 - 1245274 + | hypothetical protein AHA_1150 1245267 - 1246361 + | putative RNA 2'-O-ribose methyltransferase TERM 1409 1246383 - 1246420 + T 100 -17.1 -3.86897 | opp_overlap 1246389, overlap 1246386 1246389 GCGATGCGCCACTGA CCACAAGGCCGACAACC CACG GGTTGTCGGCCTTGTCA TTTCTGCGCCATCAG TERM 1410 1246386 - 1246417 + T 100 -23.2 -3.01125 | opp_overlap 1246389, overlap 1246383 1246389 ATGCGCCACTGACCA CAAGGCCGACAACC CACG GGTTGTCGGCCTTG TCATTTCTGCGCCAT TERM 1411 1246414 - 1246389 - T 100 -19.1 -3.4252 | opp_overlap 1246389 1246386 1246383 CGCCACTGACCACAA GGCCGACAACC CACG GGTTGTCGGCC TTGTCATTTCTGCGC TERM 1412 1246389 - 1246414 + T 100 -19.1 -3.64915 | opp_overlap 1246389, overlap 1246386 1246383 CGCCACTGACCACAA GGCCGACAACC CACG GGTTGTCGGCC TTGTCATTTCTGCGC AHA_1151 1246872 - 1246432 - | hypothetical protein TERM 1413 1246971 - 1246948 - R 95 -11.8 -4.52589 | opp_overlap 1246952, overlap 1246952 CGGCGCGAGATAAAA CAAAGGGAGC CGAA GCTCCCTTTA AAAATCAATATCTTG TERM 1414 1246952 - 1246967 + r 74 -10.4 -3.57971 | opp_overlap 1246948 1246952 GCGAGATAAAACAAA GGGAGC CGAA GCTCCC TTTAAAAATCAATAT TERM 1415 1246967 - 1246952 - R 100 -10.4 -4.83243 | opp_overlap 1246952, overlap 1246948 GCGAGATAAAACAAA GGGAGC CGAA GCTCCC TTTAAAAATCAATAT AHA_1152 1248000 - 1246993 - | isocitrate dehydrogenase TERM 1416 1247960 - 1247984 + g 93 -2.7 -5.61881 | overlap 1247961 1247963 ATGATGCTGGGGCCG ATGCCGTCGCC CGG GATGACGGTAA TTTTTCTTTTTGACA xni 1249052 - 1248147 - | exodeoxyribonuclease IX TERM 1417 1249059 - 1249043 - G 100 -15.1 -5.28176 | opp_overlap 1249040 1249043 CCCAGCGACAAAAAA GGGGCGC CAT GCGCCCC TCGTTTCAGCTGTGC TERM 1418 1249043 - 1249059 + g 79 -15.1 -2.93585 | opp_overlap 1249043, overlap 1249040 CCCAGCGACAAAAAA GGGGCGC CAT GCGCCCC TCGTTTCAGCTGTGC AHA_1154 1250436 - 1249081 - | lysine decarboxylase family protein TERM 1419 1249840 - 1249860 + g 74 -10.3 -3.72893 | GCGCACCCGCTGCTT GGCGTGGCC GAC GGCGGCGCC TTTCATCGGGCCCTC TERM 1420 1250510 - 1250489 - R 86 -10.1 -4.36914 | opp_overlap 1250490, overlap 1250490 TCCCTGGGGAGAAAA CGGGATGCC CTGT GGCATCCCT TGAATTTGATAGTAG TERM 1421 1250509 - 1250490 - R 87 -13.6 -3.21934 | opp_overlap 1250490, overlap 1250489 CCCTGGGGAGAAAAC GGGATGCC CTGT GGCATCCC TTGAATTTGATAGTA TERM 1422 1250490 - 1250509 + r 88 -13.6 -3.31415 | opp_overlap 1250490 1250489 CCCTGGGGAGAAAAC GGGATGCC CTGT GGCATCCC TTGAATTTGATAGTA AHA_1155 1252206 - 1250587 - | GGDEF domain-containing protein AHA_1156 1254567 - 1252297 - | TPR repeat-containing protein queF 1255610 - 1254702 - | 7-cyano-7-deazaguanine reductase TERM 1423 1255849 - 1255888 + G 72 -13.4 -2.72144 | gap 1, overlap 1255869 GAGCCCAAGGAGGGG CGGGTGGCCTGGCGC-CCG CAT CGGCGCGCCGAGCCCGCCG ATTTCACGGCGATGA TERM 1424 1255869 - 1255889 + G 77 -12.5 -3.53811 | overlap 1255849 GGCCTGGCGCCCGCA TCGGCGCGC CGA GCCCGCCGA TTTCACGGCGATGAA AHA_1158 1255708 - 1256256 + | Syd protein TERM 1425 1256302 - 1256279 - T 95 -12.4 -4.41494 | opp_overlap 1256280, overlap 1256280 CAGCCGCAATGAAAA GCGCCTTGCC AATT GGCAAGGCGT TTTTGTTTGGTTCAC TERM 1426 1256280 - 1256301 + T 100 -15.9 -5.38326 | opp_overlap 1256279 1256280 AGCCGCAATGAAAAG CGCCTTGCC AATT GGCAAGGCG TTTTTGTTTGGTTCA TERM 1427 1256301 - 1256280 - T 100 -15.9 -3.24414 | opp_overlap 1256280, overlap 1256279 AGCCGCAATGAAAAG CGCCTTGCC AATT GGCAAGGCG TTTTTGTTTGGTTCA AHA_1159 1257111 - 1256326 - | Zn-ribbon-containing protein TERM 1428 1256856 - 1256911 + g 70 -13.2 -2.83271 | overlap 1256858 GCAACTGGAGTTTGG GGGCGAGCAGGCCGGCTTGATTGAGC TGCT GCTCGGCCAGCTTGACCTGCTCGCTC TGGTTGTCCGGGTGC TERM 1429 1257481 - 1257471 - R 74 -8.2 -3.92625 | overlap 1257460 1257472 GAGAGCTTAACCAAA GCGC GGG GCGC TGAACAGCGGGGCAA AHA_1160 1257736 - 1257500 - | hypothetical protein AHA_1161 1258093 - 1257794 - | hypothetical protein AHA_1162 1259191 - 1258163 - | hypothetical protein TERM 1430 1259359 - 1259376 + H 80 -4.8 -5.03145 | AGAGGATAGGGGGGA GGGTGT ATAGTA ACGCCC TTTTTTGCAAAGTTC AHA_1163 1259455 - 1259790 + | hypothetical protein AHA_1164 1259787 - 1260560 + | RNA pseudouridine synthase family protein AHA_1165 1260637 - 1261077 + | protein MioC TERM 1431 1261103 - 1261132 + F 100 -14.4 -4.67048 | gap 1 TTTTTATCCTTTATT CATCCCCGCTCAG CCCGT CTG-GCGGGGATG TTTATTTTGCGATAA TERM 1432 1262883 - 1262857 - g 76 -6.6 -4.4768 | overlap 1262844 1262881 GACGAAGACAAGAAA GTCTTCGAAAGC GGT ACCTCCAAAGAC ACCTACCAAGTTGGT lamB 1261489 - 1262922 + | maltoporin TERM 1433 1262948 - 1262967 + F 100 -15 -4.86731 | opp_overlap 1262944 AAGTTAAGTTAGTCA CTGCCCCC GTAT GGGGGCAG TTTTGTTTCGCCGGG AHA_1167 1262999 - 1263985 + | maltose operon periplasmic protein TERM 1434 1264022 - 1264041 + F 100 -10.7 -4.7497 | ATAATATTTATTTGA GGCCTCC CTTGTT GGAGGCC TTTTTAATCGGTAGA ptsG 1264417 - 1265847 + | glucose-specific PTS system IIBC components TERM 1435 1265897 - 1265880 - T 95 -12.7 -4.09243 | opp_overlap 1265880 CAGAGTTGTTGAAAA GGGAGGC ACAA GCCTCCC TTTTTGCTGGGCGTC TERM 1436 1265880 - 1265897 + T 100 -12.7 -4.72986 | opp_overlap 1265880 CAGAGTTGTTGAAAA GGGAGGC ACAA GCCTCCC TTTTTGCTGGGCGTC TERM 1437 1266008 - 1265993 - T 100 -11.8 -5.28942 | opp_overlap 1265993 GAGCTCAAAGAAAAA GGCGCC CATG GGCGCC TTTGCTGCATCAGAC TERM 1438 1265993 - 1266008 + T 83 -11.8 -3.76224 | opp_overlap 1265993 GAGCTCAAAGAAAAA GGCGCC CATG GGCGCC TTTGCTGCATCAGAC AHA_1169 1266411 - 1266028 - | hypothetical protein TERM 1439 1266523 - 1266494 - R 100 -17.3 -4.08394 | opp_overlap 1266500, overlap 1266500 ACAGGGGCGCCAAAA TCAAAAGGGCGCC ATCA GGCGCCCTTTTAA ATCACCGCAAAACCG TERM 1440 1266500 - 1266517 + r 100 -14.1 -4.18018 | opp_overlap 1266500 1266494 GCGCCAAAATCAAAA GGGCGCC ATCA GGCGCCC TTTTAAATCACCGCA TERM 1441 1266517 - 1266500 - R 100 -14.1 -4.67038 | opp_overlap 1266500, overlap 1266494 GCGCCAAAATCAAAA GGGCGCC ATCA GGCGCCC TTTTAAATCACCGCA dapD 1267367 - 1266540 - | 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase glnD 1270188 - 1267534 - | protein-P-II uridylyltransferase TERM 1442 1270278 - 1270260 - R 100 -13.1 -5.35224 | opp_overlap 1270260 CTGATAAAAACAAAA CCCCGGC GGGAG GCCGGGG TTTGATGTTAACCGT TERM 1443 1270260 - 1270278 + r 93 -13.1 -3.92592 | opp_overlap 1270260 CTGATAAAAACAAAA CCCCGGC GGGAG GCCGGGG TTTGATGTTAACCGT map 1271074 - 1270286 - | methionine aminopeptidase, type I rpsB 1271434 - 1272162 + | ribosomal protein S2 TERM 1444 1272213 - 1272233 + F 100 -14 -4.35604 | opp_overlap 1272180 GATGTAATTGGTTAG CAGGGGCC CTTGT GGCCCCTG TTTCTTGTCAATTCA tsf 1272267 - 1273148 + | elongation factor Ts TERM 1445 1273174 - 1273195 + F 100 -15.9 -4.03234 | TTTTCCGTTTCCCCA GACCGCGAC TTAT GTCGCGGTC TTTATATGACCAGGA pyrH 1273220 - 1273954 + | uridylate kinase frr 1274049 - 1274606 + | ribosome recycling factor TERM 1446 1274629 - 1274655 + F 100 -15.9 -4.84918 | opp_overlap 1274626 ACAGGTATATTACGA GCGCCGTGTAG TGCCC CTGCACGGCGC TTTTGTCTTTGTGGG uppS 1274679 - 1275455 + | undecaprenyl diphosphate synthase TERM 1447 1275962 - 1275984 + G 81 -4 -5.00616 | overlap 1275960 1275964 1275965 GTGATGGGACTGGTC TGGGCGGCAG ATT CTGGCGCGTA TTTTTTCGGCAAGGC cdsA 1275482 - 1276339 + | phosphatidate cytidylyltransferase TERM 1448 1277426 - 1277436 + G 86 -8.2 -4.63218 | opp_overlap 1277426 1277425 1277423 GCCGCCAACGAAGAG GCCG TAG CGGC TTTTCTTGCAGAGCG dxr 1276403 - 1277596 + | 1-deoxy-D-xylulose 5-phosphate reductoisomerase ecfE 1277679 - 1279031 + | peptidase EcfE AHA_1181 1279066 - 1281489 + | OMP85 family outer membrane protein TERM 1449 1281502 - 1281521 + F 91 -15 -3.10796 | TAAGGACGGACTCTG CCCCCACC CAGC GGTGGGGG TATTCAATGATGGGA AHA_1182 1281638 - 1282150 + | outer membrane protein TERM 1450 1283105 - 1283084 - g 71 -5 -4.39696 | CTGCAAACCAATAAA GAGTGGCG CAAGAC CGCCGCCC GGGTGATGCGTATCG lpxD 1282154 - 1283173 + | UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase TERM 1451 1283232 - 1283217 - g 86 -4.6 -5.10933 | overlap 1283218 CTACTGAAAAGAAAA GCCTGG GTAT CCAGGA AATAATGGATCTGCT fabZ 1283198 - 1283659 + | beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ TERM 1452 1283731 - 1283748 + G 78 -6.9 -4.57755 | opp_overlap 1283731, overlap 1283726 GCCGTCATCGGTAAA GGGGTTG AAAT CGGCCCC TTTTCTGTCATCGGT lpxA 1283665 - 1284456 + | acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase TERM 1453 1284476 - 1284499 + G 74 -14.6 -2.61264 | overlap 1284475 GTTCGTATCGGTATC GTCGCCGGAG AGGT TTCCGGCGAC ATTCTGGCTGCCGGC TERM 1454 1284837 - 1284792 - g 73 -6.7 -4.25104 | gap 1 GCGCCGGTATCAAAA CGGTTCACTACGTCAGCCCCTC GGT GTGGGCCTGGCGCCA-GAACCG CATTCACAAGATCAA lpxB 1284449 - 1285588 + | lipid-A-disaccharide synthase TERM 1455 1285593 - 1285643 + F 100 -14.7 -4.41047 | opp_overlap 1285590 TCGGCAGATAACTTC CGGGCGGCCGCAGGGGCTG-CGCCA ACG TGACGCCAGGCCCTGCGGG-GCCTG TTTTGATTCAAGGCT TERM 1456 1285743 - 1285757 + G 70 -10 -3.61398 | overlap 1285724 TGGTGGGTGACGTGG TCACCG CCG CGGTGA TTCTTGACCCGGCCA TERM 1457 1286243 - 1286225 - g 70 -10.2 -3.66666 | CGCAAAAGTTTCAAA CCGGTGCG TCG CGCACTGG GGATCGAATAGACCA rnhB 1285619 - 1286254 + | ribonuclease HII TERM 1458 1287837 - 1287823 - g 73 -11.4 -3.55622 | CGCAACGCCGGCAAA CACGCC GGC GGCGTG GTGATCGCGCCCACC dnaE 1286293 - 1289772 + | DNA polymerase III, alpha subunit TERM 1459 1289945 - 1289920 - g 82 -3.3 -5.18726 | overlap 1289938 GCTGGAGAAGAAAAA CGAAGAGCT GACCAAGA AGATCTTCG GCGATCTGGGGGCCT accA 1289753 - 1290739 + | acetyl-CoA carboxylase, carboxyl transferase, alpha subunit TERM 1460 1290766 - 1290792 + F 100 -23.8 -5.40072 | TGTCGCACCAGGCTG GAAGGCCCCCGC TCT GCGGGGGCCTTC TTTTTTTGGGCGAGA TERM 1461 1291024 - 1291008 - f 74 -10.1 -3.64703 | CTCTGCGGACGTAAA CAGGCCA GCC CGGCCTG ACTCACAGGAATGTT AHA_1190 1291144 - 1292664 + | DNA-binding transcriptional activator CadC TERM 1462 1292744 - 1292699 - f 100 -16.8 -3.53012 | gap 2, opp_overlap 1292692 1292699 GGCCCTGTCGCCAAA GCGGCGCTCACCGCCGGTTGCC TAGG GGCG-CCGGCGG-GTGCACCGC CTGACATCATCTCTC cadB 1293430 - 1294764 + | lysine/cadaverine antiporter AHA_1192 1294841 - 1296973 + | lysine decarboxylase, constitutive TERM 1463 1296990 - 1297005 + F 100 -11.8 -4.64766 | opp_overlap 1296990 CGAGAGTGACAACAA CGGGCC GCAA GGCCCG TTTTTCCCATCTGGG TERM 1464 1297005 - 1296990 - f 86 -11.8 -3.83568 | opp_overlap 1296990 CGAGAGTGACAACAA CGGGCC GCAA GGCCCG TTTTTCCCATCTGGG TERM 1465 1297017 - 1297028 + F 81 -2.2 -5.42259 | CCCGTTTTTCCCATC TGGG TTCA TCCA TTTTTTTGCGAGTCA TERM 1466 1297084 - 1297109 + G 72 -11.7 -3.38046 | opp_overlap 1297101, overlap 1297082 GTCCCACGTGGTGTT CGGCTGCGCCG GCAA CAGCGCCGCCG TGTTTCCCATGCGCC TERM 1467 1297250 - 1297216 - g 73 -11.3 -3.60296 | GATGGTGATGCCAAA CGGCCATATCCGCCA GCTGA TGGCGGGGCTGGCCG ACATCGGCGTACTGG pdxY-1 1297046 - 1297912 + | pyridoxal kinase AHA_1194 1299343 - 1297922 - | cation (Na+-coupled) multidrug resistance efflux pump AHA_1195 1300358 - 1299450 - | putative HTH-type transcriptional regulator YcaN TERM 1468 1300388 - 1300377 - H 76 -3 -5.10497 | AATTCAGCGAAAAAA TGTT GAGC AACA GGGTACGTCAGCGGA AHA_1196 1300872 - 1302158 + | serine transporter family protein TERM 1469 1302188 - 1302207 + T 100 -15 -5.60993 | opp_overlap 1302188 CGCTTGAATGAAGAA GCCGCCTC GCAA GAGGCGGC TTTTTTTATGGCCGG TERM 1470 1302207 - 1302188 - T 100 -15 -3.81146 | opp_overlap 1302188 CGCTTGAATGAAGAA GCCGCCTC GCAA GAGGCGGC TTTTTTTATGGCCGG AHA_1197 1303266 - 1302226 - | ribonuclease Z, putative TERM 1471 1303600 - 1303614 + G 76 -10 -3.86346 | opp_overlap 1303577 1303580, overlap 1303594 CAGCAGACCCTGACC GAGCTG GGC CAGCTC TTTCTGGCCCGCTGC AHA_1198 1303423 - 1304325 + | LysR family transcriptional regulator TERM 1472 1304303 - 1304344 + T 100 -23.1 -3.35679 | opp_overlap 1304308, overlap 1304304 1304308 CCGAGGCGCTGGCCG ACAAATCACCGCAGCCGGC ATGA GCCGGCTGCGGTGATTGGG TTATGCCTGCGCCAG TERM 1473 1304304 - 1304343 + T 100 -26.6 -2.61264 | opp_overlap 1304308, overlap 1304303 1304308 CGAGGCGCTGGCCGA CAAATCACCGCAGCCGGC ATGA GCCGGCTGCGGTGATTGG GTTATGCCTGCGCCA TERM 1474 1304339 - 1304308 - T 100 -26 -3.85698 | opp_overlap 1304304 1304303 1304308 GCGCTGGCCGACAAA TCACCGCAGCCGGC ATGA GCCGGCTGCGGTGA TTGGGTTATGCCTGC TERM 1475 1304308 - 1304339 + T 100 -26 -3.24245 | opp_overlap 1304308, overlap 1304304 1304303 GCGCTGGCCGACAAA TCACCGCAGCCGGC ATGA GCCGGCTGCGGTGA TTGGGTTATGCCTGC AHA_1199 1305364 - 1304345 - | dienelactone hydrolase domain-containing protein AHA_1200 1306221 - 1305310 - | dienelactone hydrolase domain-containing protein TERM 1476 1306789 - 1306809 + G 78 -3.1 -5.0133 | CGCCATTCGCGCCGT GCTCTGGCC CAA GATCAGCGC TTTTTTGCACCACTA TERM 1477 1307050 - 1307074 + G 74 -2 -4.91511 | opp_overlap 1307050, overlap 1307060 1307065 TCATCAGTGCATCAA TCTGCGCTTG CCGAC CCAGGGCGGA TTTTTCTCCTGGAGT AHA_1201 1306469 - 1307362 + | putative HTH-type transcriptional regulator YcjZ TERM 1478 1308426 - 1308460 + G 75 -14.2 -2.82635 | overlap 1308431 GTCTCGCTGGCCCGC CTCACCGCCCGTGGCG CGC CGCTGCGGGCCTTGAG TCTGGTGCTCGCCAT AHA_1202 1307499 - 1308779 + | inner membrane protein YjeH TERM 1479 1308790 - 1308806 + T 100 -11.5 -5.07486 | opp_overlap 1308790 AGTAACCCGAAAAAA GCCCCGC AGT GTGGGGC TTTTTGTTGCAGGTC TERM 1480 1308806 - 1308790 - T 100 -9.3 -5.10029 | opp_overlap 1308790 AGTAACCCGAAAAAA GCCCCGC AGT GTGGGGC TTTTTGTTGCAGGTC AHA_1203 1309359 - 1308820 - | ribosomal-protein-alanine N-acetyltransferase, putative TERM 1481 1308948 - 1308925 - G 100 -17.4 -3.64703 | GCCCTCGTAGTGAAA GCCCGCCCGC TCGA GCAGGCGGGC GGAGGGGAGGTTGGG TERM 1482 1309489 - 1309459 - R 71 -11.9 -2.50113 | gap 1, overlap 1309458 CATGATCCGACCAAC CCGAGCTGACC-GG TGAG CCTGGTCAGCTCGT CACGCCACTGTTGCT AHA_1204 1311182 - 1309443 - | ABC transporter ATP-binding protein TERM 1483 1309607 - 1309650 + g 73 -10.8 -3.54475 | gap 1 CTTCGTCATCCGCCG GGCCGGCCGGGGCCTGCCCCA TGG TGGGGGCGGCCA-GGCTTGCC TTGTCTGCTGCCGGC TERM 1484 1311532 - 1311514 - R 100 -17.4 -5.60993 | GGCGGGACAAAAAAA CGCCCCGC TGG GCGGGGCG TGGTGATGGGGATGT AHA_1205 1311984 - 1311547 - | hypothetical protein TERM 1485 1312074 - 1312092 + r 76 -13.1 -2.72227 | GCCGGTTCGCGTCAT CCGCCCC TCATC GGGGCGG TCATTACCAGATCTT AHA_1206 1314141 - 1312096 - | M13 family peptidase TERM 1486 1314681 - 1314710 + G 83 -14.3 -3.53224 | gap 1 GGCGCCGGCCTGCGC GGGCTGGC-AGGCA TGG TGCCGAGCCAGCCC TTTGCCGGCGGCCTG tilS 1314255 - 1315595 + | tRNA(Ile)-lysidine synthetase TERM 1487 1315651 - 1315621 - T 100 -17.7 -3.33261 | gap 1, opp_overlap 1315622 1315625 1315628 1315640, overlap 1315625 1315628 CGCCAACGCGGATAA CGGACAAGGCCGGC ATAT GCCGGCCTTGT-CG TCTCCTGCGGCTGGC TERM 1488 1315622 - 1315651 + T 95 -17.9 -2.79183 | opp_overlap 1315621 1315625 1315628, overlap 1315625 1315628 1315640 GCCAACGCGGATAAC GGACAAGGCCGGC ATAT GCCGGCCTTGTCG TCTCCTGCGGCTGGC TERM 1489 1315648 - 1315625 - T 95 -18.2 -2.59927 | opp_overlap 1315622 1315625 1315628 1315640, overlap 1315621 1315628 AACGCGGATAACGGA CAAGGCCGGC ATAT GCCGGCCTTG TCGTCTCCTGCGGCT TERM 1490 1315625 - 1315648 + T 95 -18.2 -2.66435 | opp_overlap 1315625 1315621 1315628, overlap 1315622 1315628 1315640 AACGCGGATAACGGA CAAGGCCGGC ATAT GCCGGCCTTG TCGTCTCCTGCGGCT TERM 1491 1315645 - 1315628 - T 95 -14.1 -3.45054 | opp_overlap 1315628 1315625 1315622 1315640, overlap 1315625 1315621 GCGGATAACGGACAA GGCCGGC ATAT GCCGGCC TTGTCGTCTCCTGCG TERM 1492 1315628 - 1315645 + T 95 -14.1 -3.484 | opp_overlap 1315625 1315621 1315628, overlap 1315625 1315622 1315640 GCGGATAACGGACAA GGCCGGC ATAT GCCGGCC TTGTCGTCTCCTGCG TERM 1493 1315682 - 1315698 + T 70 -9.3 -3.62046 | CGGTTCAGTCCAGCA GGCCGGC CTT GCCCGCC TTCTTGCGGGCATAG AHA_1208 1316606 - 1315671 - | GGDEF domain-containing protein TERM 1494 1317111 - 1317075 - g 70 -12.3 -3.14132 | gap 1, opp_overlap 1317093 1317094, overlap 1317093 1317094 1317096 CGCCGTGGTGATCAA GCAGCTGGGTGAGCAG AAGCAG CTGCACACCC-GCCGC GCCCAGCTCGGGGTG TERM 1495 1317913 - 1317948 + G 71 -8.8 -3.85698 | overlap 1317900 CAGCACGTGATCATC GCGGGCTTTGGTCGGG CCGG CCAGACTTGCGCCCGC TTTCTCAAGCAGGAG AHA_1209 1316704 - 1318644 + | Kef-type K+ transport system, membrane component AHA_1210 1319871 - 1318726 - | patatin TERM 1496 1319980 - 1319951 - R 85 -4.2 -5.22289 | opp_overlap 1319952 1319953, overlap 1319953 TATCAAATATAAAAA CAGGCCTGCCAA CCATTT TTTGCAGGCCCT TTTTGAGGCTGTTCA TERM 1497 1319952 - 1319979 + r 73 -5.5 -4.62302 | opp_overlap 1319951 1319953, overlap 1319953 ATCAAATATAAAAAC AGGCCTGCCAA CCATTT TTTGCAGGCCC TTTTTGAGGCTGTTC TERM 1498 1319978 - 1319953 - R 80 -9 -4.22132 | opp_overlap 1319953 1319952, overlap 1319951 TCAAATATAAAAACA GGCCTGCCAA CCATTT TTTGCAGGCC CTTTTTGAGGCTGTT AHA_1211 1320811 - 1319993 - | esterase/lipase TERM 1499 1320883 - 1320898 + r 84 -3.2 -5.35222 | TCCTGTGGTTTTTAT GTGCGA ACGG TCGTGC TTTTTTGTCGGTTTT AHA_1212 1321515 - 1320934 - | transcriptional regulator TERM 1500 1321597 - 1321612 + r 71 -10.4 -3.28912 | GTTGAGGGTTGGATG GGAGGG TTAA CCCTCC TTGATATCCATCTGC AHA_1213 1322247 - 1321603 - | positive regulator AgmR AHA_1214 1322406 - 1323032 + | glutathione S-transferase, N-terminal TERM 1501 1323103 - 1323073 - T 100 -25.6 -3.53343 | opp_overlap 1323073 AACGGCTGGTGTAAA CAGAGAGGGGAGCC ACT GGCTCCCCTCTCTG TTTGGGGTTGATTCC TERM 1502 1323073 - 1323103 + T 100 -25.6 -3.69434 | opp_overlap 1323073 AACGGCTGGTGTAAA CAGAGAGGGGAGCC ACT GGCTCCCCTCTCTG TTTGGGGTTGATTCC malS 1325237 - 1323129 - | periplasmic alpha-amylase precursor TERM 1503 1325424 - 1325407 - R 100 -12.7 -5.24129 | opp_overlap 1325407 CGCGCCCATAAAAAA GCCGGTC GATA GACCGGC TTGTTGCATTGCCAC TERM 1504 1325407 - 1325424 + r 86 -12.7 -3.73068 | opp_overlap 1325407 CGCGCCCATAAAAAA GCCGGTC GATA GACCGGC TTGTTGCATTGCCAC AHA_1216 1326608 - 1325445 - | hypothetical protein AHA_1217 1326979 - 1326608 - | hypothetical protein AHA_1218 1328037 - 1326976 - | bactoprenol glucosyl transferase AHA_1219 1328639 - 1328094 - | hypothetical protein AHA_1220 1329063 - 1328953 - | hypothetical protein TERM 1505 1329098 - 1329121 + GH 71 -9.5 -3.59979 | opp_overlap 1329112, overlap 1329117 TACGCCGGCACGGCG GCCGGGCAG AAGGAG CTGCGCGGC TTTGCCGTCGAGGCG AHA_1221 1329044 - 1329736 + | amino acid ABC transporter periplasmic protein AHA_1222 1330001 - 1331302 + | cell wall degradation protein TERM 1506 1331340 - 1331323 - f 100 -14.1 -4.26188 | opp_overlap 1331323 GCCACAGAGTGAAAA GCCCGGC CTGC GCCGGGC TTTTTCATGGCCCCT TERM 1507 1331323 - 1331340 + F 100 -14.1 -4.7254 | opp_overlap 1331323 GCCACAGAGTGAAAA GCCCGGC CTGC GCCGGGC TTTTTCATGGCCCCT AHA_1223 1331453 - 1331998 + | M15 family non-peptidase protein AHA_1224 1332091 - 1332342 + | hypothetical protein TERM 1508 1332368 - 1332396 + T 100 -16.2 -3.06915 | opp_overlap 1332375, overlap 1332375 GCCCCGTTGCCCATA CAAAAAAGCGCC TGACC GGCGCTTTTTTG TTGGCTGCAATCCGT TERM 1509 1332389 - 1332375 - T 100 -8.5 -5.36441 | opp_overlap 1332368 1332375 TGCCCATACAAAAAA GCGCC TGACC GGCGC TTTTTTGTTGGCTGC TERM 1510 1332375 - 1332389 + T 100 -8.5 -5.4833 | opp_overlap 1332375, overlap 1332368 TGCCCATACAAAAAA GCGCC TGACC GGCGC TTTTTTGTTGGCTGC AHA_1225 1333051 - 1332437 - | hypothetical protein TERM 1511 1333181 - 1333149 - R 93 -9.2 -4.78149 | gap 1, opp_overlap 1333154, overlap 1333154 1333156 TTTATAATGCAAAAA TGA-AACGGGGCCCC CAAG GGAGCCCTGTTGTCA CTACCAACCGGCTCA TERM 1512 1333154 - 1333175 + r 70 -10.1 -3.35679 | gap 1, opp_overlap 1333149 1333154 1333156 AATGCAAAAATGAAA CGGGGC-CCC CAA GGGAGCCCTG TTGTCACTACCAACC TERM 1513 1333175 - 1333154 - R 84 -9.3 -4.34557 | opp_overlap 1333154, overlap 1333149 1333156 AATGCAAAAATGAAA CGGGGCCCC CAAG GGAGCCCTG TTGTCACTACCAACC cysZ 1333958 - 1333194 - | protein CysZ TERM 1514 1335946 - 1335999 + G 83 -14.6 -3.53012 | overlap 1335947 GGTGAACGTGAGCGG TTGCACACCGAGCAGGCCGCAG-GCC GGGA GGCGCTGC-GCCGGCTCGATGAGCAG TTTGCCGCCGCCAAC TERM 1515 1335947 - 1335998 + G 78 -15.9 -2.71712 | overlap 1335946 GTGAACGTGAGCGGT TGCACACCGAGCAGGCCGCAG-GCC GGGA GGCGCTGC-GCCGGCTCGATGAGCA GTTTGCCGCCGCCAA TERM 1516 1336377 - 1336344 - g 71 -13.2 -3.01712 | GCGGGCGCTGGAAGA GGCGCGCCTGC-GCCG GGAG CAGCAGCAGGC-CGCC TGCCAGCGACTGCAA TERM 1517 1336918 - 1336896 - g 72 -7.6 -4.1196 | overlap 1336887 1336874 AAGCTACCTGGAAAA CCAGTGCCAG GAT CTGGAACAGG CGCTGGAAACCTTGA smc 1334068 - 1337442 + | chromosome segregation protein SMC TERM 1518 1338406 - 1338420 + G 79 -11.4 -3.84451 | overlap 1338393 ATGCAGCTGCCGCTG CGCAGC AAC GCTGCG TTTGCCTTTGAGGAC zipA 1337458 - 1338570 + | cell division protein ZipA TERM 1519 1338620 - 1338599 - f 85 -4.3 -5.1963 | opp_overlap 1338600, overlap 1338600 TCTAATGAATAAAAA GTGCGGTAC CCAG GTGCCGCAT TTTTATTGGTCCGCT TERM 1520 1338600 - 1338619 + F 100 -10 -5.1356 | opp_overlap 1338599 1338600 CTAATGAATAAAAAG TGCGGTAC CCAG GTGCCGCA TTTTTATTGGTCCGC ligA 1338670 - 1340676 + | DNA ligase, NAD-dependent TERM 1521 1340727 - 1340699 - T 100 -21.9 -4.1347 | opp_overlap 1340699 1340703, overlap 1340703 CTTCAATCAGATAAA CAAAGAACCCGGC ATG GCCGGGTTCTTTG TTATGGGGGCACTGA TERM 1522 1340699 - 1340727 + T 100 -21.9 -3.29144 | opp_overlap 1340699 1340703, overlap 1340703 CTTCAATCAGATAAA CAAAGAACCCGGC ATG GCCGGGTTCTTTG TTATGGGGGCACTGA TERM 1523 1340723 - 1340703 - T 100 -16.9 -4.64952 | opp_overlap 1340699 1340703, overlap 1340699 AATCAGATAAACAAA GAACCCGGC ATG GCCGGGTTC TTTGTTATGGGGGCA TERM 1524 1340703 - 1340723 + T 100 -16.9 -4.30719 | opp_overlap 1340703 1340699, overlap 1340699 AATCAGATAAACAAA GAACCCGGC ATG GCCGGGTTC TTTGTTATGGGGGCA AHA_1230 1341727 - 1340750 - | ABC-type sugar transport system, ATPase component TERM 1525 1342049 - 1342079 + H 83 -8.2 -4.41348 | overlap 1342050 TGTTCCCTTCTCATC GTCAGCCCTGGCTT GTC AAGCCTCGGCTGAA TTTATTTGCGCCGAG TERM 1526 1342050 - 1342078 + H 78 -11.7 -3.24488 | overlap 1342049 GTTCCCTTCTCATCG TCAGCCCTGGCTT GTC AAGCCTCGGCTGA ATTTATTTGCGCCGA TERM 1527 1342136 - 1342150 + H 73 -5.6 -4.56597 | CAAGGGTAAGCCGAG GGCGAG AGC CTGGCC TTTTTAACGGGGAAA nrdD 1342170 - 1344287 + | anaerobic ribonucleoside triphosphate reductase nrdG 1344417 - 1344926 + | anaerobic ribonucleotide reductase-activating protein AHA_1233 1344964 - 1345161 + | hypothetical protein TERM 1528 1345183 - 1345202 + F 100 -13.6 -5.67967 | opp_overlap 1345183 GCCGCTTTGCCAAAA GCCAACCC GATG GGGTTGGC TTTTTTTATGCTGCT TERM 1529 1345202 - 1345183 - f 100 -13.6 -4.07568 | opp_overlap 1345183 GCCGCTTTGCCAAAA GCCAACCC GATG GGGTTGGC TTTTTTTATGCTGCT AHA_1234 1345306 - 1345698 + | hypothetical protein TERM 1530 1345729 - 1345699 - Tf 95 -15.4 -3.1886 | opp_overlap 1345700 1345702, overlap 1345702 1345706 ATTGAAGTGGAGTAA TGAGCAACCCCGGC CAG GCCGGGGTTGCTGT TTACTGCTGCTTGCA TERM 1531 1345700 - 1345728 + TF 100 -18.9 -3.82031 | opp_overlap 1345699 1345702 1345706, overlap 1345702 TTGAAGTGGAGTAAT GAGCAACCCCGGC CAG GCCGGGGTTGCTG TTTACTGCTGCTTGC TERM 1532 1345702 - 1345726 + TF 100 -21.5 -3.4914 | opp_overlap 1345699 1345702 1345706, overlap 1345700 GAAGTGGAGTAATGA GCAACCCCGGC CAG GCCGGGGTTGC TGTTTACTGCTGCTT TERM 1533 1345726 - 1345702 - Tf 100 -21.5 -2.79023 | opp_overlap 1345702 1345700, overlap 1345699 1345706 GAAGTGGAGTAATGA GCAACCCCGGC CAG GCCGGGGTTGC TGTTTACTGCTGCTT TERM 1534 1345722 - 1345706 - Tf 95 -15.1 -3.29096 | opp_overlap 1345702 1345700, overlap 1345702 1345699 TGGAGTAATGAGCAA CCCCGGC CAG GCCGGGG TTGCTGTTTACTGCT AHA_1235 1346089 - 1345730 - | hypothetical protein AHA_1236 1346978 - 1346217 - | amino acid ABC transporter, periplasmic amino acid-binding TERM 1535 1347085 - 1347062 - gR 100 -12.4 -5.53288 | CGGAAGGCAAAAAAA CGCCCCGGTA GGCA TAGCGGGGCG AAAGGCAGCACATCC AHA_1237 1346055 - 1347104 + | hypothetical protein AHA_1238 1348148 - 1347120 - | hypothetical protein AHA_1239 1349214 - 1348159 - | HlyD family secretion protein AHA_1240 1349696 - 1349229 - | MarR family transcriptional regulator TERM 1536 1349705 - 1349757 + H 90 -16.7 -2.79679 | opp_overlap 1349701, overlap 1349708 1349710 TCATCATGAGACTCT CCATTTACTTAGCTTGCTAAGCA TTGTAGT TGTTTAGCAGGCTAAGTAAATAG TGTGATCGCGATCTT TERM 1537 1349708 - 1349754 + H 90 -17 -2.66435 | opp_overlap 1349701, overlap 1349705 1349710 TCATGAGACTCTCCA TTTACTTAGCTTGCTAAGCA TTGTAGT TGTTTAGCAGGCTAAGTAAA TAGTGTGATCGCGAT AHA_1241 1350015 - 1350206 + | hypothetical protein AHA_1242 1350752 - 1352059 + | sodium:citrate symporter AHA_1243 1352086 - 1353621 + | malate dehydrogenase TERM 1538 1355155 - 1355176 + G 71 -13.1 -3.0127 | opp_overlap 1355143, overlap 1355160 AATGGCGCCGCACCG CCGAACAGA CGAC TCTGTTCGG TATCTACTTGAATAA AHA_1244 1353639 - 1355207 + | sensor kinase CitA, putative AHA_1245 1355211 - 1355903 + | transcriptional regulatory protein DpiA TERM 1539 1355928 - 1355966 + T 81 -11.9 -3.46982 | gap 1, opp_overlap 1355938 1355940, overlap 1355931 1355933 1355940 CGCACGCAGATCCAT GCCAACAAAAGAGGGAGC CTGA GCTCCCTTTTTTGT-GTC TGTTGTTGGTGTAAA TERM 1540 1355931 - 1355964 + T 87 -13.3 -3.30213 | opp_overlap 1355938 1355940, overlap 1355928 1355933 1355940 ACGCAGATCCATGCC AACAAAAGAGGGAGC CTGA GCTCCCTTTTTTGTG TCTGTTGTTGGTGTA TERM 1541 1355933 - 1355962 + T 100 -15.9 -3.2058 | opp_overlap 1355938 1355940, overlap 1355931 1355928 1355940 GCAGATCCATGCCAA CAAAAGAGGGAGC CTGA GCTCCCTTTTTTG TGTCTGTTGTTGGTG TERM 1542 1355957 - 1355938 - T 83 -7.8 -4.65916 | opp_overlap 1355933 1355931 1355928 1355940, overlap 1355940 TCCATGCCAACAAAA GAGGGAGC CTGA GCTCCCTT TTTTGTGTCTGTTGT TERM 1543 1355955 - 1355940 - T 83 -10.4 -3.94438 | opp_overlap 1355940 1355933 1355931 1355928, overlap 1355938 CATGCCAACAAAAGA GGGAGC CTGA GCTCCC TTTTTTGTGTCTGTT TERM 1544 1355940 - 1355955 + T 100 -10.4 -5.46276 | opp_overlap 1355938 1355940, overlap 1355933 1355931 1355928 CATGCCAACAAAAGA GGGAGC CTGA GCTCCC TTTTTTGTGTCTGTT AHA_1246 1356900 - 1356001 - | drug/metabolite exporter family protein TERM 1545 1356817 - 1356790 - G 72 -7.7 -4.11692 | CACCCAGCGGTAAAA TGAGATGGCGG CGGGAT CCACCACCCCA GCGGCGGCCTTGGCC AHA_1247 1356997 - 1357803 + | AraC family transcriptional regulator TERM 1546 1357846 - 1357829 - T 100 -14.1 -4.4959 | opp_overlap 1357829 TCTAAGCAATGAAAA GGGCGCC CGCA GGCGCCC TTGTTGATCACCGGA TERM 1547 1357829 - 1357846 + T 95 -14.1 -3.71848 | opp_overlap 1357829 TCTAAGCAATGAAAA GGGCGCC CGCA GGCGCCC TTGTTGATCACCGGA AHA_1248 1359429 - 1357867 - | aldehyde dehydrogenase TERM 1548 1359247 - 1359271 + g 72 -7.8 -4.11216 | opp_overlap 1359247, overlap 1359250 GGCCACTTCGCAGAA CACCTTGCCG TCCAC CGGCGAGATG TTTTCAAAGTAGCGG TERM 1549 1359510 - 1359499 - H 77 -4.4 -4.97402 | CAAAAGTTACAAAAA CGTT ATCA AACG GGATGTGGCAGCGTA TERM 1550 1359891 - 1359912 + G 100 -5.8 -5.40072 | overlap 1359893 AGCGGTGACGACGGC TTCGCTCG CCACGC CGAGCGCA TTTTTTTGCGCAGCG TERM 1551 1360189 - 1360175 - g 73 -8.5 -4.10161 | overlap 1360176 CATGACCCTGGAAAA CGCGC TGCTG GCGCG CCAGCCGGGCTGGCT AHA_1249 1359621 - 1361297 + | acetoin catabolism regulatory protein TERM 1552 1362155 - 1362169 + G 71 -11.4 -3.40403 | ATCGCCTGGGGGGCG CTCGGC GCC GCCGAG TTCTGCTGGCACGCC TERM 1553 1362294 - 1362267 - g 78 -14.2 -3.03159 | TCAAGCTGGCCAACA TGCAGACCGAGA TTGC CCTCGGCCTGCA GGGCTGCCTGCAGGC AHA_1250 1361384 - 1362559 + | glutaryl-CoA dehydrogenase TERM 1554 1362603 - 1362628 + G 81 -16.1 -2.72991 | GGATCTCAGCCGCGT GCTGGCCGGCC CCTG GGCCAGCCAGC TGCTTGCCGATCTCG AHA_1251 1362559 - 1363713 + | caib/baif family protein AHA_1252 1363753 - 1364250 + | lactoylglutathione lyase phoB 1364353 - 1365042 + | phosphate regulon transcriptional regulatory protein PhoB TERM 1555 1365430 - 1365445 + G 81 -10.4 -4.18018 | GGTGCAACCGGCTGG CCGAGC AGCT GCTCGG TTTTCGCTGGCCGGA phoR 1365051 - 1366346 + | phosphate regulon sensor protein PhoR TERM 1556 1366370 - 1366403 + F 80 -8.9 -4.15044 | opp_overlap 1366376 1366378, overlap 1366378 GGCAAGGGGTTGGCA TCAAAAGAGGGCGGC GATG GCGGCCCTTTTTTCA TTTGTTAAACAAGCC TERM 1557 1366397 - 1366376 - f 71 -5.7 -4.25104 | opp_overlap 1366370 1366378, overlap 1366378 GGGTTGGCATCAAAA GAGGGCGGC GATG GCGGCCCTT TTTTCATTTGTTAAA TERM 1558 1366378 - 1366395 + F 100 -8.3 -5.46129 | opp_overlap 1366376 1366378, overlap 1366370 GTTGGCATCAAAAGA GGGCGGC GATG GCGGCCC TTTTTTCATTTGTTA TERM 1559 1366835 - 1366812 - g 74 -2.3 -4.82901 | CGGTGTGGATAAAAA CCTGCCGGA TTACAC TCCGACCAG CGGCATCTCGGGCAA AHA_1255 1366723 - 1367697 + | phosphate-binding protein TERM 1560 1367717 - 1367734 + F 100 -14.1 -5.42198 | GTTTCCTTTGCCAGA CGGGCCC TGCG GGGCCCG TTTTGTTTTTTGGCC TERM 1561 1368257 - 1368214 - g 75 -11.6 -3.62522 | overlap 1368217 CAAGGTGGCCAAGAA CCAGGATCAGCTCGCCACCG TCAT CGGCCACGAGCTGACCCACG TGCTGGCCCAGCACT TERM 1562 1368254 - 1368217 - g 83 -16.3 -2.93073 | overlap 1368214 GGTGGCCAAGAACCA GGATCAGCTCGCCACCG TCAT CGGCCACGAGCTGACCC ACGTGCTGGCCCAGC AHA_1256 1367861 - 1368667 + | M48 family peptidase AHA_1257 1368655 - 1369161 + | GCN5-related N-acetyltransferase TERM 1563 1370129 - 1370158 + G 77 -13.5 -3.26546 | gap 1, overlap 1370145 1370148 CGCGAGGCCCGCTTC GGCGGCGCCG-GCG GGG TGCGCGGGGCCGCC TTGCTCAATTTATGA AHA_1258 1369271 - 1370173 + | ROK family protein AHA_1259 1370216 - 1370941 + | copper homeostasis protein CutC AHA_1260 1370950 - 1371069 + | hypothetical protein TERM 1564 1371133 - 1371103 - f 100 -19.1 -3.77206 | opp_overlap 1371099 1371108, overlap 1371108 GATAATCCTACGAAA CAGAAGGACGCCG CATGT CGGCGCCCTTCTG CCAGCTTGTGTGAAC TERM 1565 1371108 - 1371128 + F 70 -9.6 -3.31799 | opp_overlap 1371108 1371103, overlap 1371099 TCCTACGAAACAGAA GGACGCCG CATGT CGGCGCCC TTCTGCCAGCTTGTG TERM 1566 1371128 - 1371108 - f 86 -11.8 -3.86252 | opp_overlap 1371099 1371108, overlap 1371103 TCCTACGAAACAGAA GGACGCCG CATGT CGGCGCCC TTCTGCCAGCTTGTG fklB 1371255 - 1371866 + | FKBP-type peptidyl-prolyl cis-trans isomerase FklB TERM 1567 1371887 - 1371914 + F 100 -19.2 -5.40072 | opp_overlap 1371889 1371891 CTGGCTTGATTGATA CAGACGGCGGCC CTCG GGTCGCCGTCTG TTTTTTTGCGCCACG TERM 1568 1371912 - 1371889 - f 81 -13.8 -2.91264 | opp_overlap 1371887, overlap 1371891 GGCTTGATTGATACA GACGGCGGCC CTCG GGTCGCCGTC TGTTTTTTTGCGCCA TERM 1569 1371929 - 1371957 + F 81 -8 -4.24948 | gap 1 GTTTTTTTGCGCCAC GCGC-GGCGGGGC ATGG GCAGCGCCTGCGC TTTTGGATATAGTCA TERM 1570 1372311 - 1372352 + G 74 -9.6 -3.91897 | gap 3 CTCTACCCGGCCCCC TTGCCCC-AGGC-C-CAGCTC ATC GAGCTGTGCGCCTTGGGGGAA TTTATCGATCGGGAC TERM 1571 1372636 - 1372648 + G 72 -7.7 -4.13282 | ATACCCCGGTCGCCC TGCTG GCC CAGCA TTTTGACGGTGTGCT AHA_1262 1371996 - 1372877 + | ABC transporter, ATP-binding protein TERM 1572 1373496 - 1373508 + G 76 -9.1 -4.03234 | GCGGGCCACCCCGCT CTCGG CCG CCGAG TTTCTCTGCGCCCAG AHA_1263 1372951 - 1373964 + | ABC transporter permease protein TERM 1573 1373983 - 1374003 + G 70 -11.8 -3.12327 | overlap 1373981 CACTACCGCTGGTTG GCGGGGCC CTGCT GGCCCTGC TGTTGAGTCTGCCGG AHA_1264 1373961 - 1374275 + | hypothetical protein TERM 1574 1374286 - 1374257 - T 84 -9.2 -4.24204 | gap 1, overlap 1374258 CACCGATATCGAAAA CGGCCCGCGCGGC GAGTA GCCG-GCGGGCAA AGACGTGCATGAACG AHA_1265 1374694 - 1374332 - | hypothetical protein AHA_1266 1374736 - 1375239 + | nudix hydrolase 3 TERM 1575 1375255 - 1375285 + T 100 -24.2 -3.53012 | opp_overlap 1375255 1375260, overlap 1375260 CGCGCACCCTGCAAA CAAAACGGGCAGCC ACT GGCTGCCCGTTTTG TTTCGGGGCGGGGGA TERM 1576 1375285 - 1375255 - T 100 -24.2 -3.55444 | opp_overlap 1375255 1375260, overlap 1375260 CGCGCACCCTGCAAA CAAAACGGGCAGCC ACT GGCTGCCCGTTTTG TTTCGGGGCGGGGGA TERM 1577 1375260 - 1375280 + T 100 -18.3 -4.86731 | opp_overlap 1375255 1375260, overlap 1375255 ACCCTGCAAACAAAA CGGGCAGCC ACT GGCTGCCCG TTTTGTTTCGGGGCG TERM 1578 1375280 - 1375260 - T 100 -18.3 -4.87133 | opp_overlap 1375260 1375255, overlap 1375255 ACCCTGCAAACAAAA CGGGCAGCC ACT GGCTGCCCG TTTTGTTTCGGGGCG AHA_1267 1376229 - 1375303 - | putative phenylacetate-CoA ligase AHA_1268 1376356 - 1376829 + | peroxiredoxin TERM 1579 1376834 - 1376848 + F 74 -2.8 -4.87291 | opp_overlap 1376834 CGGCGCTGTAAAATA TCAATC GTC GTTTGA TTTTTCCTTGAAATG TERM 1580 1376895 - 1376927 + F 86 -12.8 -3.73775 | gap 1, opp_overlap 1376901, overlap 1376896 1376901 CACTGGGCCCACTTC TGCAAAGAGCCGGGC CATC GCCTGGCTCTT-GCG TTTGCTGGCGATGGA TERM 1581 1376896 - 1376926 + F 83 -14.1 -2.84051 | gap 1, opp_overlap 1376901, overlap 1376895 1376901 ACTGGGCCCACTTCT GCAAAGAGCCGGGC CATC GCCTGGCTCTT-GC GTTTGCTGGCGATGG TERM 1582 1376901 - 1376922 + F 87 -13.7 -3.30701 | opp_overlap 1376901, overlap 1376896 1376895 GCCCACTTCTGCAAA GAGCCGGGC CATC GCCTGGCTC TTGCGTTTGCTGGCG TERM 1583 1376922 - 1376901 - f 77 -11.5 -3.54424 | opp_overlap 1376901 1376896 1376895 GCCCACTTCTGCAAA GAGCCGGGC CATC GCCTGGCTC TTGCGTTTGCTGGCG TERM 1584 1377891 - 1377913 + G 70 -7.6 -4.05322 | GCTTCGTGGGCTACA CCGGCTGGTT GCT GGCCAGCCAG TTTATCTAGCCGTTT AHA_1269 1376954 - 1377922 + | putative K+-dependent Na+/Ca+ exchanger-like protein TERM 1585 1377947 - 1377970 + T 100 -16.8 -3.85509 | opp_overlap 1377947 CTGGATGAAACGAAA GAGGGGAAGC CGCG GCTTCCCCTC TTTGCATTCTGTTGA TERM 1586 1377970 - 1377947 - T 100 -16.8 -4.10552 | opp_overlap 1377947 CTGGATGAAACGAAA GAGGGGAAGC CGCG GCTTCCCCTC TTTGCATTCTGTTGA AHA_1270 1379143 - 1377992 - | ornithine decarboxylase TERM 1587 1379493 - 1379476 - H 91 -2.5 -5.75342 | overlap 1379478 CGGTGCGAAAAAAAA CGGCGGC CGGG GTGGCCG AGTGGGAGACAGCTC TERM 1588 1379495 - 1379512 + H 76 -5.5 -4.74504 | GGCCGGGGTGGCCGA GTGGGAG ACAG CTCACAC TTTTTGGATTACCAT agcS-1 1379859 - 1381235 + | amino acid carrier protein TERM 1589 1381260 - 1381285 + T 95 -11.9 -4.41844 | opp_overlap 1381263, overlap 1381249 1381263 CATCCATCCAAACGA AAAGCCACGAC CCGG GTCGTGGCTTG TTTTATGGGCATTTT TERM 1590 1381263 - 1381282 + T 100 -13.6 -4.31397 | opp_overlap 1381263, overlap 1381260 1381249 CCATCCAAACGAAAA GCCACGAC CCGG GTCGTGGC TTGTTTTATGGGCAT TERM 1591 1381282 - 1381263 - T 100 -13.6 -4.56914 | opp_overlap 1381263 1381260 1381249 CCATCCAAACGAAAA GCCACGAC CCGG GTCGTGGC TTGTTTTATGGGCAT AHA_1272 1382046 - 1381345 - | protein ligase TERM 1592 1382106 - 1382122 + r 95 -15.1 -3.72893 | opp_overlap 1382106 AGCGAAGGAGGTAAA GCCCCGC ATG GCGGGGC TTTGGTGCAAGGATG TERM 1593 1382122 - 1382106 - R 95 -15.1 -3.71794 | opp_overlap 1382106 AGCGAAGGAGGTAAA GCCCCGC ATG GCGGGGC TTTGGTGCAAGGATG yicE 1383543 - 1382146 - | xanthine permease AHA_1274 1383790 - 1384929 + | response regulator PleD (Stalked cell differentiation-controllingprotein) TERM 1594 1384939 - 1384918 - T 93 -15.9 -3.05022 | opp_overlap 1384918, overlap 1384920 GCCGCCATACAGACA GATGCCGCC TGAG GGCGGCATC TTGCTTGCGCTGGGT TERM 1595 1384918 - 1384939 + T 100 -15.9 -3.35992 | opp_overlap 1384918 1384920 GCCGCCATACAGACA GATGCCGCC TGAG GGCGGCATC TTGCTTGCGCTGGGT TERM 1596 1384937 - 1384920 - T 81 -12.7 -3.08197 | opp_overlap 1384918, overlap 1384918 CGCCATACAGACAGA TGCCGCC TGAG GGCGGCA TCTTGCTTGCGCTGG AHA_1275 1385212 - 1384964 - | hypothetical protein AHA_1276 1386742 - 1385363 - | mate efflux family protein AHA_1277 1386914 - 1387720 + | helix-turn-helix, AraC type:Arac protein, arabinose-binding/dimerisation AHA_1278 1387717 - 1389483 + | malate dehydrogenase TERM 1597 1389510 - 1389527 + T 100 -11.3 -5.28176 | opp_overlap 1389505 1389510 AGGCGCAAAGCAAAA GGGATGC CTCG GCATCCC TTTTTTGTGCATCGC TERM 1598 1389527 - 1389510 - T 95 -11.3 -4.55128 | opp_overlap 1389510, overlap 1389505 AGGCGCAAAGCAAAA GGGATGC CTCG GCATCCC TTTTTTGTGCATCGC AHA_1279 1390679 - 1389624 - | major outer membrane protein OmpAII TERM 1599 1390853 - 1390870 + r 95 -12.7 -4.07568 | opp_overlap 1390853 CCAGGCAATAAAAAA GGAGGCC GGAT GGCCTCC TTTTCGGCCACCAAG TERM 1600 1390870 - 1390853 - R 100 -12.7 -5.4833 | opp_overlap 1390853 CCAGGCAATAAAAAA GGAGGCC GGAT GGCCTCC TTTTCGGCCACCAAG AHA_1280 1391892 - 1390891 - | major outer membrane protein OmpAII TERM 1601 1392301 - 1392272 - R 100 -13.7 -4.03234 | opp_overlap 1392277, overlap 1392277 TGGCGGGGAGACAAA CAAAAGGGGATGC CGTG GCATCCCCTTTTC GCATCATCTGAACGG TERM 1602 1392277 - 1392296 + r 100 -13.6 -4.16279 | opp_overlap 1392272 1392277 GGGAGACAAACAAAA GGGGATGC CGTG GCATCCCC TTTTCGCATCATCTG TERM 1603 1392296 - 1392277 - R 100 -13.6 -5.05113 | opp_overlap 1392277, overlap 1392272 GGGAGACAAACAAAA GGGGATGC CGTG GCATCCCC TTTTCGCATCATCTG AHA_1281 1393358 - 1392324 - | major outer membrane protein TERM 1604 1393057 - 1393038 - G 70 -10 -3.55368 | gap 1, overlap 1393029 AGCGAAGGCAGAGAA GTC-GCCGC CCA GCGGCAGAC GAGCGATACCGGACA TERM 1605 1393393 - 1393403 + r 86 -6.8 -5.07011 | overlap 1393373 TGGCACGTTGTTCAC GTGC TTC GCAC TTTTTAATTTATGTA AHA_1282 1394263 - 1393667 - | hypothetical protein TERM 1606 1393922 - 1393908 - G 82 -5.6 -4.87626 | overlap 1393909 GCTGAACAGCAAAAA TGCAGG TGG CCTGCT TCGAGCCAGTCGGCC TERM 1607 1394503 - 1394487 - H 75 -3.6 -4.85782 | overlap 1394498 GTCGCGAAAAATAAA GGTGGA GTCAA TCCGCC GTACGGAGTATGGAA AHA_1283 1394522 - 1394788 + | transcriptional protein TERM 1608 1394811 - 1394829 + F 100 -11.7 -5.28176 | opp_overlap 1394811 GAGCTTTGACAAAAA TGCCGCC ATCGA GGCGGCA TTTTTTATCCATCAA TERM 1609 1394829 - 1394811 - f 100 -11.7 -4.83615 | opp_overlap 1394811 GAGCTTTGACAAAAA TGCCGCC ATCGA GGCGGCA TTTTTTATCCATCAA AHA_1284 1394993 - 1396354 + | sodium-dependent symporter family protein TERM 1610 1396407 - 1396390 - T 100 -12.7 -4.34402 | opp_overlap 1396390 GTTCCCACAGCAAAA GAGCGCC GCAA GGCGCTC TTTTTGTTGGGGAGG TERM 1611 1396390 - 1396407 + T 100 -12.7 -5.06414 | opp_overlap 1396390 GTTCCCACAGCAAAA GAGCGCC GCAA GGCGCTC TTTTTGTTGGGGAGG AHA_1285 1397308 - 1396442 - | alpha/beta fold family hydrolase AHA_1286 1398895 - 1397342 - | sensor histidine kinase AHA_1287 1399092 - 1400153 + | HlyD family secretion protein AHA_1288 1400153 - 1403272 + | AcrB/AcrD/AcrF family protein TERM 1612 1403418 - 1403390 - g 70 -11.7 -3.18912 | opp_overlap 1403390 1403413 TCAGCCATTTATGAA CCGCTGCCCTT TGCCTAT ATGGGCAGCGG TTTGCTGTTGTTGGG TERM 1613 1403390 - 1403418 + G 83 -11.7 -4.01135 | opp_overlap 1403390, overlap 1403413 TCAGCCATTTATGAA CCGCTGCCCTT TGCCTAT ATGGGCAGCGG TTTGCTGTTGTTGGG AHA_1289 1403366 - 1403734 + | hypothetical protein TERM 1614 1403760 - 1403780 + F 100 -14 -4.27259 | opp_overlap 1403747 AACCCGCACTTTTCA GGCGAGCC CCGCT GGCTCGCC TTTTCCGTATCTATC AHA_1290 1403872 - 1406280 + | radical SAM domain-containing protein TERM 1615 1406316 - 1406333 + T 100 -12.7 -4.72272 | opp_overlap 1406316 ATAGAAATAAAAAAA GGCGACC GGAT GGTCGCC TTTTTAATAGCCAAC TERM 1616 1406333 - 1406316 - T 100 -12.7 -6.04953 | opp_overlap 1406316 ATAGAAATAAAAAAA GGCGACC GGAT GGTCGCC TTTTTAATAGCCAAC TERM 1617 1406549 - 1406567 + T 95 -14.6 -3.33671 | opp_overlap 1406547 1406545 AATGTCACTAATACT TGAGGGGC AAT GCCCCTCA TTCTAGAATCCATAT AHA_1291 1407529 - 1406570 - | hypothetical protein AHA_1292 1408483 - 1407548 - | hypothetical protein AHA_1293 1408883 - 1409230 + | hypothetical protein AHA_1294 1410272 - 1409232 - | AraC/XylS family transcriptional regulator TERM 1618 1410195 - 1410171 - G 72 -2.6 -4.79223 | overlap 1410173 GCACAGCAGCAAAAA GAGGGCGGTC GTTCT GGCCGCCCGG CCGAGGCGCGCCAGC TERM 1619 1410193 - 1410173 - G 76 -9.6 -4.01045 | overlap 1410171 ACAGCAGCAAAAAGA GGGCGGTC GTTCT GGCCGCCC GGCCGAGGCGCGCCA AHA_1295 1410464 - 1410805 + | inner membrane protein YhaI AHA_1296 1410802 - 1411284 + | hypothetical protein AHA_1297 1411773 - 1411339 - | hypothetical protein AHA_1298 1411303 - 1411725 + | hypothetical protein AHA_1299 1412303 - 1411770 - | DinB family protein AHA_1300 1412491 - 1413399 + | Gfo/Idh/MocA family oxidoreductase ruvC 1413664 - 1414185 + | crossover junction endodeoxyribonuclease RuvC TERM 1620 1414559 - 1414588 + G 75 -12.1 -3.54424 | gap 1 TGGCTGGTGCTGGGG GGCTGCGGC-AGCG CCG TGCTGGCCGCCGCC TTTCCGAACGTCGGC TERM 1621 1414965 - 1414981 + G 71 -9.3 -3.74693 | TGGGCGCCACCGATA GCCGGGC CCC GGCCGGC TTTGCTCCCATCGCC AHA_1302 1414508 - 1415194 + | aquaporin Z TERM 1622 1415224 - 1415239 + T 100 -10.4 -5.42514 | opp_overlap 1415212 AAAGTGTGGTATCGA CACGCC CCCG GGCGTG TTTTTTCGTTTCTGG TERM 1623 1415283 - 1415267 - T 93 -10.8 -4.4078 | opp_overlap 1415265 1415262 TGGCGGGAACGAAAA CGGGCC ACAAG GGCCCG GCTGCTTGCGTTGCT AHA_1303 1416061 - 1415318 - | transglycosylase SLT domain-containing protein TERM 1624 1415827 - 1415846 + g 75 -3.4 -4.82901 | overlap 1415797 GCTCCGGCATCATGT CGGAGTAG CGCA CCACACCG TTTTTCTGCACCGAC TERM 1625 1416222 - 1416201 - R 100 -17.3 -4.55209 | opp_overlap 1416205 GACAGACCAAATAAA GAGGCCGCC CGGT GGCGGCCTC GCGCGGCAATGGCCG AHA_1304 1417601 - 1416240 - | alpha-amylase TERM 1626 1417708 - 1417721 + r 83 -8.1 -4.39002 | opp_overlap 1417708 CTGTCTTGCCAGCAA TCGCC GGGC GGCGA TTTTGTGAGCACTTT TERM 1627 1417790 - 1417776 - R 76 -2.7 -5.00884 | opp_overlap 1417777 1417789, overlap 1417741 1417777 ACGGCTTGCAAAAAA CCGCG CAGGC CGCGT CATTACTGACTTTTC AHA_1305 1418995 - 1417832 - | protease LasA TERM 1628 1419633 - 1419644 + G 71 -5.8 -4.371 | CGAACAGGATTACTA CCAC CTGT GTGG TTTTCGTCTGCTGCC AHA_1306 1419424 - 1419903 + | acetyltransferase AHA_1307 1420516 - 1419908 - | hypothetical protein TERM 1629 1420015 - 1420034 + g 79 -9.2 -4.22652 | opp_overlap 1420015, overlap 1420016 CGTTGAGCCGATAGA CCGGCTGG GTCT CCAGCCGC TTTTCCATGCTCTGC TERM 1630 1420016 - 1420033 + g 73 -12.7 -3.13109 | opp_overlap 1420015, overlap 1420015 GTTGAGCCGATAGAC CGGCTGG GTCT CCAGCCG CTTTTCCATGCTCTG TERM 1631 1420328 - 1420339 + g 71 -5.8 -4.2528 | overlap 1420322 CTTGATGATGCCGGG CAGC TCCA GCTG TTTGTTCACTTGCAC TERM 1632 1420711 - 1420732 + G 75 -4.4 -4.70266 | gap 1, overlap 1420711 1420714 TCGCCCTCATCTATG CC-ATCCCG TTTGC CGGGGTCGG TTTTTACGTGCTGTT cls 1420548 - 1422029 + | cardiolipin synthetase AHA_1309 1422125 - 1423387 + | putative lipoprotein TERM 1633 1423411 - 1423440 + T 100 -19.5 -4.18018 | opp_overlap 1423411 1423414 1423418, overlap 1423414 1423418 GCTTTAGTGCACATA CAACAAAGGCTCC CGTG GGAGCCTTTGTTG TTTTCAGTGGCCGGG TERM 1634 1423440 - 1423411 - T 100 -19.5 -2.89564 | opp_overlap 1423411 1423414 1423418, overlap 1423414 1423418 GCTTTAGTGCACATA CAACAAAGGCTCC CGTG GGAGCCTTTGTTG TTTTCAGTGGCCGGG TERM 1635 1423437 - 1423414 - T 95 -15.4 -3.59698 | opp_overlap 1423414 1423411 1423418, overlap 1423411 1423418 TTAGTGCACATACAA CAAAGGCTCC CGTG GGAGCCTTTG TTGTTTTCAGTGGCC TERM 1636 1423414 - 1423437 + T 100 -15.4 -4.21812 | opp_overlap 1423411 1423414 1423418, overlap 1423411 1423418 TTAGTGCACATACAA CAAAGGCTCC CGTG GGAGCCTTTG TTGTTTTCAGTGGCC TERM 1637 1423418 - 1423433 + T 100 -10.4 -4.68601 | opp_overlap 1423414 1423411 1423418, overlap 1423414 1423411 TGCACATACAACAAA GGCTCC CGTG GGAGCC TTTGTTGTTTTCAGT TERM 1638 1423433 - 1423418 - T 93 -10.4 -4.42974 | opp_overlap 1423418 1423414 1423411, overlap 1423414 1423411 TGCACATACAACAAA GGCTCC CGTG GGAGCC TTTGTTGTTTTCAGT purU 1424293 - 1423457 - | formyltetrahydrofolate deformylase TERM 1639 1424333 - 1424347 + H 91 -7.8 -5.0133 | overlap 1424334 GTTGGCGCCTGAGTC TGCGCA GGC TGCGCG TTTTTTCAGGCACTA ribB 1424752 - 1425405 + | 3,4-dihydroxy-2-butanone 4-phosphate synthase TERM 1640 1425887 - 1425904 + T 100 -11.3 -5.81412 | opp_overlap 1425887 ATCCATGCGAAAAAA TGGCGCA GTTA TGCGCCA TTTTTTTTGCCTGAA TERM 1641 1425904 - 1425887 - T 100 -11.3 -5.05782 | opp_overlap 1425887 ATCCATGCGAAAAAA TGGCGCA GTTA TGCGCCA TTTTTTTTGCCTGAA TERM 1642 1425962 - 1425993 + T 74 -2.8 -4.8622 | opp_overlap 1425965, overlap 1425964 CTGATGCTCGCCTGA CAAGGCAATGCCGA TCAC TCGGCATCACCCCG TTTTTCATTCCCGCA TERM 1643 1425990 - 1425965 - T 78 -11.9 -3.28791 | opp_overlap 1425964 1425962 ATGCTCGCCTGACAA GGCAATGCCGA TCAC TCGGCATCACC CCGTTTTTCATTCCC AHA_1312 1426861 - 1426013 - | thioredoxin domain-containing protein AHA_1313 1427580 - 1426858 - | 4'-phosphopantetheinyltransferase family protein TERM 1644 1427238 - 1427207 - G 80 -5.1 -4.82901 | gap 1, overlap 1427208 CTCTGCGCATAAAAA CGGCG-GGCCAG TGGCAGAGT CTGGCGGCGCCG CTGACCCATCTCTAT AHA_1314 1427844 - 1428344 + | NlpC TERM 1645 1428367 - 1428378 + F 71 -4.4 -4.58395 | overlap 1428349 TGGACAAACGGCTCG CAGT ACGG ACTG TTTTTCCAACCTCAC TERM 1646 1428399 - 1428416 + F 100 -12.7 -5.252 | CCAACCTCACTTGAA CCGGGCT CGAC AGCCCGG TTTTTTATGGCCGTC AHA_1315 1428493 - 1429449 + | putative SAM-dependent methyltransferase TERM 1647 1429472 - 1429500 + F 100 -19.7 -5.00616 | opp_overlap 1429475 GAAGCGGGACGACGA CAAGGGGCATGCC GAT GGTATGCCCCTTG TTTTTTGGGGAGCGC TERM 1648 1429497 - 1429475 - f 88 -13.4 -3.44051 | opp_overlap 1429472 GCGGGACGACGACAA GGGGCATGCC GAT GGTATGCCCC TTGTTTTTTGGGGAG AHA_1316 1429721 - 1430440 + | nodulation protein N TERM 1649 1430507 - 1430486 - T 100 -14.5 -5.47218 | opp_overlap 1430486 TCGTATTGAAAAAAA CAGGCTCAC CTCG GTGAGCCTG TTTTTTTATGGCGTT TERM 1650 1430486 - 1430507 + T 100 -14.5 -5.63504 | opp_overlap 1430486 TCGTATTGAAAAAAA CAGGCTCAC CTCG GTGAGCCTG TTTTTTTATGGCGTT AHA_1317 1431586 - 1430588 - | hypothetical protein TERM 1651 1431331 - 1431373 + g 76 -10.6 -3.90286 | gap 1 AGGCTTTCTGGTCAT CCGG-CGTCAGGGCCAGCA GGGTAA TGCCGGTCTTGACGGTCGG TTTGGGTTTGTCCTG AHA_1318 1432531 - 1431614 - | LysM domain-containing protein TERM 1652 1431792 - 1431813 + g 78 -10.1 -4.08945 | overlap 1431809 ACCTCCAGCCAGTGA CGGCCATCG GGCT CGATGGCGG TTTTGACCGGCTGGT TERM 1653 1432003 - 1432049 + g 71 -5.8 -4.25104 | gap 2 TGGCGAACTTGCCGA GGGGATTGTCGGGACCGGGCGG CACCA CCGC-CGG-CAGGGTGATCCCC TTTTGCTCCAGCCAG TERM 1654 1432289 - 1432300 + g 76 -7.2 -4.2828 | GGTTGGCAGGGTCAG CCGG GTGC CCGG TTTTGGTAAATAGGG TERM 1655 1432860 - 1432821 - R 71 -11.4 -2.90194 | gap 1 AGTGCTGCAACGACA GCAGGCACGACGGCGGAGA ACA TCT-CGCCACCGGGCATGC GCTCATCTGCTGGTT TERM 1656 1433050 - 1433074 + r 100 -15.8 -5.18355 | TCCGCCATCTTCAAG GCCCAAGCTG CCAGC CAGCTTGGGC TTTTTCGTTTTTGCG TERM 1657 1433118 - 1433136 + r 74 -10.2 -3.49102 | overlap 1433132 CACCCCGTATTCCAT GCCAGTGG ATC CCCCTGGC TTATCTGGCCAGTGT AHA_1320 1436307 - 1433179 - | putative transporter AmrB TERM 1658 1433891 - 1433876 - G 71 -4.6 -4.39386 | GGGAAACCATCAAAA CGCATC ATCT GTTGCG GTGATTCCCGCCAGA AHA_1321 1437678 - 1436323 - | acriflavin resistance protein A AHA_1322 1437636 - 1438364 + | two-component response regulator TERM 1659 1439062 - 1439075 + G 76 -8.1 -4.21343 | CACTCTCAAGCGGGA GCTCG ATGC CGAGC TTTGTGTCTGTTGCG AHA_1323 1438361 - 1439419 + | sensor histidine kinase TERM 1660 1439559 - 1439527 - T 81 -12 -3.52849 | opp_overlap 1439530, overlap 1439525 1439530 CAACGAGATCAAATA TCAGGCCCAAGCTG CTAGC CAGCTTGGGCCTTT CTCTATTTGCACGCT TERM 1661 1439530 - 1439556 + T 100 -18.1 -4.27886 | opp_overlap 1439527 1439525 1439530 CGAGATCAAATATCA GGCCCAAGCTG CTAGC CAGCTTGGGCC TTTCTCTATTTGCAC TERM 1662 1439556 - 1439530 - T 95 -18.1 -2.88959 | opp_overlap 1439530, overlap 1439527 1439525 CGAGATCAAATATCA GGCCCAAGCTG CTAGC CAGCTTGGGCC TTTCTCTATTTGCAC AHA_1324 1439998 - 1439669 - | quaternary ammonium compound-resistance protein QacE AHA_1325 1440430 - 1440017 - | quaternary ammonium compound-resistance protein QacE AHA_1326 1441142 - 1440450 - | hypothetical protein TERM 1663 1440511 - 1440496 - G 78 -3.2 -5.00616 | overlap 1440497 CTGCTTTTCAAAAAA TCGATG GCGG CATCGG TCAGCTGGGCCTCGG TERM 1664 1440609 - 1440577 - G 71 -11.2 -3.49475 | gap 1, opp_overlap 1440577 1440592 CTGACCGTGAGATAA CGCCGCGCC-GTGCC CGCC GGCACCGGGGCCGCG TCGTTCGCCGGTGCC TERM 1665 1440592 - 1440627 + g 86 -13.2 -4.08216 | gap 1, opp_overlap 1440577, overlap 1440577 CGCCGCGCCGTGCCC GCCGGCACCGG-GGCCG CGT CGTTCGCCGGTGCCAGC TTTTCCAGCAGCTCA AHA_1327 1441774 - 1441154 - | propanediol utilization TERM 1666 1441300 - 1441340 + g 76 -13.9 -3.21276 | overlap 1441298 CGCCGTCGCTGCGCA CGCTCACCTTCTGACCGTG GGT CACGTTCAGCTGGCGAGCG TCTTGTGGCGAGAGG AHA_1328 1442223 - 1441771 - | hypothetical protein AHA_1329 1443222 - 1442236 - | benzylsuccinate synthase activating enzyme AHA_1330 1445678 - 1443297 - | pyruvate formate-lyase AHA_1331 1447863 - 1446709 - | alcohol dehydrogenase, iron-containing TERM 1667 1447530 - 1447511 - G 74 -10.6 -3.73775 | opp_overlap 1447516 1447521, overlap 1447513 GGGATGGCCACGAAA CAGGGGCG CTCG CGCCCCAG ATGCGGGCGGGTTTG TERM 1668 1447528 - 1447513 - G 74 -11.8 -3.45324 | opp_overlap 1447516 1447521, overlap 1447511 GATGGCCACGAAACA GGGGCG CTCG CGCCCC AGATGCGGGCGGGTT AHA_1332 1448136 - 1447879 - | ethanolamine utilization protein EutN/carboxysome structural protein Ccml eutE 1449728 - 1448163 - | acetaldehyde dehydrogenase (acetylating) TERM 1669 1448287 - 1448257 - G 76 -9.7 -4.07568 | gap 2 CTGGCGCCGGCAAAA CGGTCGTCGGCACTG TGG CAG-GCCGGCG-CCG GGGCACTGAAGCGGG TERM 1670 1448562 - 1448573 + g 83 -7.2 -4.58395 | GGTGTTGATCAGGAT CCGG TTGA CCGG TTTTTCCAGGCTGAA TERM 1671 1449097 - 1449078 - G 76 -10.6 -3.85698 | GCTGCGCTCGATAAA GGCCGGGC CGTT GCCCGGGC CGCCACTGATGGTCG TERM 1672 1449787 - 1449809 + r 70 -9.8 -3.40403 | opp_overlap 1449779 AAAAAGTGCGGACGG GGCGTGCCCT CTC AGGTCATGCC TTGTGCTGCGCCGCG AHA_1334 1450081 - 1449803 - | ethanolamine utilization protein TERM 1673 1450046 - 1450072 + g 70 -7.3 -4.04413 | overlap 1450037 GATGCAGGCCACCAG GCCTTTGGTCT CAATC AGACCAAGCGC TTCTTTCATCATGTT AHA_1335 1450380 - 1450096 - | microcompartments family protein AHA_1336 1450675 - 1450397 - | microcompartments family protein AHA_1337 1451911 - 1451360 - | hypothetical protein AHA_1338 1452684 - 1451875 - | transcriptional regulatory protein, C terminal TERM 1674 1452589 - 1452574 - GR 100 -4.6 -5.55001 | CAAGAAAAAATAAAA CAGCGC ATTG GCGGTG ATGGATAATTGGCTG AHA_1339 1453311 - 1452706 - | TetR family transcriptional regulator AHA_1340 1454607 - 1453693 - | LysR family transcriptional regulator TERM 1675 1454728 - 1454738 + G 74 -5.4 -4.56775 | CTCTCTAAACTTGAA TGCA GTT TGCA TTTTTAGGCCAACCT fdhD-1 1454723 - 1455553 + | formate dehydrogenase family accessory protein FdhD TERM 1676 1455559 - 1455574 + G 86 -7.5 -4.7497 | opp_overlap 1455557 1455558, overlap 1455557 GTCATATTGAAAAGC CCGCC AAAGCC GGCGG TTTTTCGTCCCTGCA TERM 1677 1455752 - 1455785 + G 72 -4.4 -4.56597 | opp_overlap 1455772 CGCCAAGGCGGTGGC CTGGGAATCCACCG GCAAGA CGGTGGGGGCCGAG TTTTTCGCCGCCCAC AHA_1342 1455540 - 1457828 + | oxidoreductase alpha (molybdopterin) subunit TERM 1678 1457901 - 1457935 + T 100 -17.3 -3.08464 | opp_overlap 1457902 1457905 1457908, overlap 1457905 1457908 CCGCACATCCTATAA ACAACAACGCCGCAT AAGAG ATGCGGCGTTGTTGA TTGCGTGACTGGTGC TERM 1679 1457934 - 1457902 - T 100 -20.8 -3.91144 | opp_overlap 1457901 1457905 1457908, overlap 1457905 1457908 CGCACATCCTATAAA CAACAACGCCGCAT AAGAG ATGCGGCGTTGTTG ATTGCGTGACTGGTG TERM 1680 1457931 - 1457905 - T 100 -16.7 -4.08279 | opp_overlap 1457905 1457901 1457908, overlap 1457902 1457908 ACATCCTATAAACAA CAACGCCGCAT AAGAG ATGCGGCGTTG TTGATTGCGTGACTG TERM 1681 1457905 - 1457931 + T 100 -16.7 -3.3782 | opp_overlap 1457902 1457905 1457908, overlap 1457901 1457908 ACATCCTATAAACAA CAACGCCGCAT AAGAG ATGCGGCGTTG TTGATTGCGTGACTG TERM 1682 1457908 - 1457928 + T 90 -12.6 -3.82604 | opp_overlap 1457905 1457902 1457908, overlap 1457905 1457901 TCCTATAAACAACAA CGCCGCAT AAGAG ATGCGGCG TTGTTGATTGCGTGA TERM 1683 1457928 - 1457908 - T 95 -12.6 -4.15703 | opp_overlap 1457908 1457905 1457901, overlap 1457905 1457902 TCCTATAAACAACAA CGCCGCAT AAGAG ATGCGGCG TTGTTGATTGCGTGA AHA_1344 1458846 - 1458106 - | putative hydrolase TERM 1684 1459047 - 1459065 + H 100 -12.4 -5.85178 | AACCTCATTTCCCCG CCGTCGCG CCC TGCGACGG TTTTTTTTGCCTGTT TERM 1685 1459143 - 1459115 - H 90 -4.4 -5.41143 | overlap 1459116 TACCGGGCAAAAAAA TGCCCAACTAGC ATGAA GCAGGTTGGGCG AGACTTAATGTTTAA TERM 1686 1459354 - 1459338 - g 74 -2.2 -4.82154 | overlap 1459340 AATCGATACCAAAAA CCGCAT TCTCG ATGCCG CTGAGGTGTTGTTTG AHA_1345 1459315 - 1459968 + | PsrA protein TERM 1687 1460101 - 1460088 - g 72 -3.7 -4.59773 | CTCCATCCGTAAAAA GGTGG TCAC CCGCC CGGTGTTCGGCATCT TERM 1688 1460250 - 1460224 - g 83 -5 -5.0538 | overlap 1460226 1460243 CCCGACTGGAAAAAA CTGCACGGCT ACGGTAA AGCCGAGCTG ACCGCCGAGGAGCAG AHA_1346 1460017 - 1462341 + | acyl-CoA dehydrogenase TERM 1689 1462368 - 1462384 + F 100 -13.7 -6.08342 | opp_overlap 1462368 CTCCTGAACCTGAAA CCGGCCA TCA TGGCCGG TTTTTTTGTTTGTTA TERM 1690 1462384 - 1462368 - f 89 -13.7 -3.66178 | opp_overlap 1462368 CTCCTGAACCTGAAA CCGGCCA TCA TGGCCGG TTTTTTTGTTTGTTA AHA_1347 1462512 - 1465574 + | AcrB/AcrD/AcrF family protein AHA_1348 1465590 - 1466636 + | RND family efflux transporter MFP subunit TERM 1691 1466678 - 1466661 - T 100 -12.7 -5.60993 | opp_overlap 1466661 TTCGCCATAAAAAAA CGGCTCC CGCG GGAGCCG TTTTTGGTGCCGGTG TERM 1692 1466661 - 1466678 + T 100 -12.7 -4.72986 | opp_overlap 1466661 TTCGCCATAAAAAAA CGGCTCC CGCG GGAGCCG TTTTTGGTGCCGGTG pyk-2 1468141 - 1466702 - | pyruvate kinase TERM 1693 1468220 - 1468233 + r 74 -4.5 -4.731 | TGCACCCGCTTGCAA GCCAT CTGG GTGGC TTTTGTTACTAAATT TERM 1694 1468303 - 1468279 - R 81 -13.6 -2.88579 | gap 1, opp_overlap 1468282 1468296, overlap 1468281 GGAAGGTGGCAGAGA CAGCCGGGGGC CGAG GCCCCCG-CTG CTTACGAAGAGTGGG hexR 1469168 - 1468305 - | DNA-binding transcriptional regulator HexR TERM 1695 1469376 - 1469362 - H 71 -8.6 -3.88583 | GAAAGCGCTTACAAA TGTTGC AAA GCAACA ACACTGTGAGCGGGC TERM 1696 1469485 - 1469459 - H 77 -8 -4.12603 | gap 1 GGCACCAAATAATAA GTGCGGGACGG TAACGG CCGCCCCG-AC CCCAGTAACGAAGGA glk 1469509 - 1470477 + | glucokinase TERM 1697 1470642 - 1470658 + T 100 -10.8 -5.64274 | GCCTGAACTGTTTCA CCGGCC CTCGC GGCCGG TTTTTTTATGCCTGC TERM 1698 1470761 - 1470736 - T 100 -20.5 -2.52464 | CTGCGCCGCAATGGA CTGCGCCTGCC GGGT GGCAGGCGCAG TGGGTAGGGATGGGC AHA_1352 1472135 - 1470777 - | sensor protein PhoQ AHA_1353 1472866 - 1472159 - | transcriptional regulatory protein PhoP AHA_1354 1475131 - 1472972 - | RTX toxin transporter TERM 1699 1473739 - 1473758 + g 70 -10.6 -3.66018 | TGGCACCCTGGAGGG CGGGCACG GAGG CGAGCCCG TTGTTGCCATGCTCC rtxD 1476498 - 1475134 - | RTX toxin transporter rtxB 1478582 - 1476495 - | RTX toxin transporter TERM 1700 1477260 - 1477232 - G 73 -6.7 -4.25104 | gap 1 CCCTCTCCAGCAAAA TGGCGCCGG-CA CTCACC TGACCCGCGCCA TCACGCTGGTGCTCG AHA_1357 1478891 - 1479289 + | hypothetical protein TERM 1701 1479366 - 1479355 - g 81 -4.4 -5.08088 | AACTGGCAACAAAAA CAAC ATAT GTTG GGAGGTGTCATGCTG TERM 1702 1479489 - 1479523 + G 93 -19.4 -3.36059 | overlap 1479493 TTACGAAGACTCATG CGGACGCCCGGTTGCA TTT TGCAACTGGGCGTTTG TCTCTTTATCCATTC TERM 1703 1479493 - 1479519 + G 100 -18.8 -4.31166 | overlap 1479489 GAAGACTCATGCGGA CGCCCGGTTGCA TTT TGCAACTGGGCG TTTGTCTCTTTATCC rtxC 1479322 - 1479771 + | cytolysin-activating lysine-acyltransferase RtxC TERM 1704 1484135 - 1484167 + G 74 -4.8 -4.56597 | gap 1, opp_overlap 1484163, overlap 1484137 1484153 GCGGGGCGCCCAGGG TTGGCAGCA-TGCCG GTGC CGGCATTGAAGCCGA TTTTTCCGCCGCCAC AHA_1359 1479789 - 1493846 + | structural toxin protein RtxA TERM 1705 1493878 - 1493895 + F 100 -11.3 -5.60993 | opp_overlap 1493878 CCCGTTAGGTAAAAA CCTGCTC TTCG GAGCAGG TTTTTTTATGGCAAG TERM 1706 1493895 - 1493878 - f 95 -11.3 -4.65895 | opp_overlap 1493878 CCCGTTAGGTAAAAA CCTGCTC TTCG GAGCAGG TTTTTTTATGGCAAG AHA_1360 1494201 - 1494695 + | acetyltransferase TERM 1707 1494771 - 1494749 - T 100 -13.5 -5.5604 | opp_overlap 1494749 GCAATCAATAAAAAA GCCAGTCAG GGTCA CTGACTGGC TTTTTTGTTGGCGCT TERM 1708 1494749 - 1494771 + T 100 -13.5 -5.45652 | opp_overlap 1494749 GCAATCAATAAAAAA GCCAGTCAG GGTCA CTGACTGGC TTTTTTGTTGGCGCT AHA_1361 1496124 - 1494796 - | hypothetical protein TERM 1709 1496215 - 1496191 - g 77 -4.1 -4.86621 | overlap 1496194 1496196 1496198 ATGGCTAACCAAAAA CTATACAGCCG GCA CGGCGGAATCG AACAATATCTCCGGC TERM 1710 1496702 - 1496735 + G 80 -5.3 -4.89567 | gap 1, opp_overlap 1496707, overlap 1496700 1496721 ATGAATCCAGCTACA CCGAACCG-CTGTTGT TCA ACAGCAAACTGTTCGG TTTTCTGTTTTGCGA AHA_1362 1496176 - 1497486 + | response regulator TERM 1711 1497501 - 1497463 - f 87 -13.2 -3.22298 | gap 2, opp_overlap 1497459 1497466 1497470, overlap 1497465 1497466 GCCATCCATCAGCAA TACCGAGAGCCCGCCGCC AGCTA GGCGGCGGGC-CT-GGTG TCATGACTTGCCTTA TERM 1712 1497499 - 1497465 - f 100 -15.8 -3.17527 | gap 2, opp_overlap 1497459 1497466 1497470, overlap 1497463 1497466 CATCCATCAGCAATA CCGAGAGCCCGCCGCC AGCTA GGCGGCGGGC-CT-GG TGTCATGACTTGCCT TERM 1713 1497499 - 1497466 - f 85 -16 -2.50195 | gap 1, opp_overlap 1497459 1497466 1497470, overlap 1497465 1497463 ATCCATCAGCAATAC CGAGAGCCCGCCGCC AGCTA GGCGGCGGGC-CTGG TGTCATGACTTGCCT TERM 1714 1497466 - 1497499 + F 86 -16 -2.83112 | gap 1, opp_overlap 1497465 1497466 1497463, overlap 1497459 1497470 ATCCATCAGCAATAC CGAGAGCCCGCCGCC AGCTA GGCGGCGGGC-CTGG TGTCATGACTTGCCT TERM 1715 1497470 - 1497496 + F 89 -16.5 -2.67441 | opp_overlap 1497465 1497466 1497463, overlap 1497466 1497459 ATCAGCAATACCGAG AGCCCGCCGCC AGCTA GGCGGCGGGCC TGGTGTCATGACTTG AHA_1363 1497715 - 1498491 + | hypothetical protein TERM 1716 1498504 - 1498549 + F 100 -22.7 -2.52896 | gap 1, overlap 1498527 TAGTCACCCGCTTTC CGGCCTGTTCCGTCGGCCCGCA TCT TGCTGGCTGACGGGA-AGGCCG TCACTTGGCAAATAA TERM 1717 1498955 - 1498927 - g 74 -9.5 -3.85817 | ATCGCCGGGCAGAAA TCCTCCATCGCCT TCG AGGCGACGGTGCA GGTACGCAACAAGAT fliE 1498693 - 1499010 + | flagellar hook-basal body complex protein FliE fliF 1499098 - 1500780 + | flagellar MS-ring protein fliG 1500773 - 1501834 + | flagellar motor switch protein G fliH 1501899 - 1502705 + | flagellar assembly protein FliH TERM 1718 1502708 - 1502739 + F 93 -12.9 -4.0492 | overlap 1502713 TGCCCGCGGCTAAGG GCGTGCGGGCCGC CAGGGT GCGGCCCGTCTGC TTTCTCTACCCATTC TERM 1719 1502713 - 1502734 + F 91 -14.4 -3.08695 | overlap 1502708 GCGGCTAAGGGCGTG CGGGCCGC CAGGGT GCGGCCCG TCTGCTTTCTCTACC fliI 1502778 - 1504109 + | flagellum-specific ATP synthase fliJ 1504136 - 1504576 + | flagellar export protein FliJ AHA_1370 1504806 - 1506689 + | putative flagellar hook-length control protein FliK TERM 1720 1506907 - 1506888 - g 76 -10.6 -3.85698 | TCCGGCGGCGACAAA CCGGCGGC CGAG GCCGCGGG GGAGGGCAAAGACGC fliL 1506747 - 1507265 + | flagellar basal body-associated protein FliL fliM 1507275 - 1508345 + | flagellar motor switch protein FliM fliN 1508397 - 1508789 + | flagellar motor switch protein FliN fliO 1508786 - 1509169 + | flagellar biosynthesis protein, FliO fliP 1509156 - 1509935 + | flagellar biosynthesis protein FliP fliQ 1509963 - 1510232 + | flagellar biosynthetic protein FliQ fliR 1510300 - 1511091 + | flagellar biosynthesis protein FliR flhB 1511226 - 1512356 + | flagellar biosynthetic protein FlhB TERM 1721 1513659 - 1513671 + G 91 -9.1 -4.4767 | opp_overlap 1513654, overlap 1513654 TGCGCAAGAAGCTCT CCCAG GAG CTGGG TTTTCTGGTGCCTGC flhA 1512464 - 1514566 + | flagellar biosynthesis protein FlhA flhF 1514583 - 1516004 + | flagellar biosynthesis protein FlhF AHA_1381 1516012 - 1516881 + | CobQ/CobB/MinD/ParA family protein fliA 1516874 - 1517593 + | flagellar biosynthesis sigma factor TERM 1722 1517675 - 1517688 + F 70 -9.5 -3.34517 | opp_overlap 1517675, overlap 1517673 GCATCATGTAAGTGA GCCGC TCTG GCGGC TATTTAGGAGGGAAT cheY 1517705 - 1518088 + | chemotaxis protein CheY cheZ 1518101 - 1518841 + | chemotaxis protein CheZ TERM 1723 1519802 - 1519768 - g 74 -14.8 -2.54896 | overlap 1519764 1519786 CCGGCAGCCAAGCCA GCCCCGGCCGCCGCCA AAC CGGCTGCGGCCCCGGC AAAACCGGCACCAGC cheA-2 1518853 - 1521039 + | chemotaxis protein CheA cheB-2 1521072 - 1522187 + | chemotaxis-specific methylesterase TERM 1724 1522756 - 1522772 + G 70 -12.3 -3.24924 | overlap 1522754 CGCCACTATTTACGG GGTTGGC TTT GCCAACC TGTTATACCTGCCGA motA 1522196 - 1522927 + | chemotaxis protein MotA AHA_1388 1522930 - 1523856 + | ompA family protein AHA_1389 1523861 - 1524655 + | CobQ/CobB/MinD/ParA family protein AHA_1390 1524652 - 1525524 + | CheW domain-containing protein TERM 1725 1525618 - 1525605 - g 72 -4.5 -4.62051 | AAACATGACAGAAAA GCGCA ATAT TGCAC AGAATCTGGCCGAAG cheW-2 1525594 - 1526082 + | chemotaxis protein CheW AHA_1392 1526101 - 1526487 + | ATPase involved in DNA repair TERM 1726 1526492 - 1526515 + F 100 -13.2 -4.27617 | GCCGCTCATGAATGT TCGGGAAGGC GTCC GCCTTCCTGA TTTTCCTCCCCTCTC ccmA 1526642 - 1527277 + | heme ABC exporter, ATP-binding protein CcmA TERM 1727 1527455 - 1527475 + G 71 -14 -2.64616 | overlap 1527455 1527457 CCGGCATCATCTGGG TGGCCGCC CTGCT GGCGGCCA TGCTGTCGCTGGAGC ccmB 1527283 - 1527951 + | heme exporter protein CcmB ccmC 1528115 - 1528855 + | heme exporter protein C TERM 1728 1529022 - 1528979 - g 95 -13.2 -4.26076 | gap 1, overlap 1529010 1529013 CCACCCGTATGAAAA CCCGCGC-CCTGCTCGGTG AACTGCG CAACAAGCAGGCGCGCGAG GCCCGCCGCAAGGCG AHA_1396 1528858 - 1529064 + | hypothetical protein ccmE 1529061 - 1529552 + | cytochrome c-type biogenesis protein CcmE TERM 1729 1530935 - 1530946 + G 71 -5.8 -4.26076 | CGCTGGTATTGAGCC TGGC CGCC GCCA TTTTGCTGCCGCTGC ccmF-1 1529635 - 1531590 + | cytochrome c-type biogenesis protein CcmF TERM 1730 1531991 - 1532012 + G 74 -10.1 -3.72027 | GGGGCTGGATCTGGG GGTCTACGG CGCG CCGGAGACC TTCTTCATCGACAGT dsbE 1531587 - 1532117 + | thiol:disulfide interchange protein DsbE AHA_1400 1532129 - 1532608 + | cytochrome c-type biogenesis protein CcmH AHA_1401 1532605 - 1533879 + | cytochrome c-type biogenesis protein CcmH vacJ 1533984 - 1534772 + | lipoprotein VacJ TERM 1731 1534821 - 1534806 - T 93 -11.8 -4.26351 | opp_overlap 1534806 GAGTAACGCAACAAA GGCGCC TGCG GGCGCC TTTTTCGTCTCTGCT TERM 1732 1534806 - 1534821 + T 100 -11.8 -4.85129 | opp_overlap 1534806 GAGTAACGCAACAAA GGCGCC TGCG GGCGCC TTTTTCGTCTCTGCT TERM 1733 1534858 - 1534877 + T 100 -16.4 -4.18018 | opp_overlap 1534858 CAGGCATAAAAAAAA CGCCCCGC AAGA GCGGGGCG TTTTGGCTAGAACGG TERM 1734 1534877 - 1534858 - T 100 -16.4 -5.96219 | opp_overlap 1534858 CAGGCATAAAAAAAA CGCCCCGC AAGA GCGGGGCG TTTTGGCTAGAACGG AHA_1403 1535483 - 1534899 - | superoxide dismutase (Fe) AHA_1404 1535770 - 1536114 + | putative glutaredoxin-like protein TERM 1735 1536133 - 1536090 - T 80 -10.9 -3.81488 | TGCCGCCAAACACAA GCAGGATGACGCCGCCGCC GAATAA GGCAGCAGCTGCATCATGC AAAAAGGGGAGCCGC TERM 1736 1536139 - 1536157 + T 100 -16 -5.63517 | opp_overlap 1536139 TGCATCATGCAAAAA GGGGAGCC GCT GGCTCCCC TTTTTTATTTCACAA TERM 1737 1536157 - 1536139 - T 100 -16 -4.68593 | opp_overlap 1536139 TGCATCATGCAAAAA GGGGAGCC GCT GGCTCCCC TTTTTTATTTCACAA AHA_1405 1537505 - 1536192 - | tRNA and rRNA cytosine-C5-methylase TERM 1738 1537002 - 1537013 + g 76 -5.8 -4.56775 | GGCTTCGCCCAGTTG CTCG CTGC CGAG TTTTTCCAGCCAGGT TERM 1739 1537926 - 1537975 + G 70 -9.9 -3.55548 | gap 1, opp_overlap 1537927 1537928, overlap 1537927 CCTTCAAGGGCTATA ACCCGGCGGTACC-GGTAGAGACG GGA CGTTTTGACCTGGGGCCGCTGGGC TTTCACGCCATGTTC TERM 1740 1537927 - 1537974 + G 72 -13.4 -2.73007 | gap 1, opp_overlap 1537927 1537928, overlap 1537926 CTTCAAGGGCTATAA CCCGGCGGTACC-GGTAGAGACG GGA CGTTTTGACCTGGGGCCGCTGGG CTTTCACGCCATGTT AHA_1406 1537565 - 1539595 + | hypothetical protein AHA_1407 1539592 - 1539915 + | hypothetical protein TERM 1741 1539955 - 1539976 + F 100 -11.5 -5.00616 | opp_overlap 1539953 1539957, overlap 1539957 AAGGGCATACCAAGG GAGGGAGGC GTGA GCCTCCCCC TTTTTTGCAGCCGCC TERM 1742 1539957 - 1539974 + F 76 -12.7 -2.75708 | opp_overlap 1539957 1539953, overlap 1539955 GGGCATACCAAGGGA GGGAGGC GTGA GCCTCCC CCTTTTTTGCAGCCG TERM 1743 1539974 - 1539957 - f 75 -12.7 -2.58714 | opp_overlap 1539955 1539957, overlap 1539953 GGGCATACCAAGGGA GGGAGGC GTGA GCCTCCC CCTTTTTTGCAGCCG pdxH 1540087 - 1540725 + | pyridoxamine 5'-phosphate oxidase AHA_1409 1540755 - 1541369 + | glutathione S-transferase family protein TERM 1744 1542374 - 1542400 + G 89 -14.4 -3.96148 | CAAGCAGGCGCCGAG GAGGGTGAGCCG AGG CGGCTGGCCCTC TTTCTGGTAGAGCAG AHA_1410 1541369 - 1542988 + | hypothetical protein AHA_1411 1543021 - 1543542 + | acetyltransferase TERM 1745 1543557 - 1543586 + T 93 -15.9 -3.0094 | opp_overlap 1543564, overlap 1543564 AATGGTCTATATCTG TGAAAAAGGCGCC CTCG GGCGCCTTTTTTA TCTCTGTCCGTCAGC TERM 1746 1543564 - 1543579 + T 100 -11.8 -5.4492 | opp_overlap 1543564, overlap 1543557 TATATCTGTGAAAAA GGCGCC CTCG GGCGCC TTTTTTATCTCTGTC TERM 1747 1543579 - 1543564 - T 100 -11.8 -4.59109 | opp_overlap 1543564 1543557 TATATCTGTGAAAAA GGCGCC CTCG GGCGCC TTTTTTATCTCTGTC AHA_1412 1544732 - 1543602 - | cupin superfamily protein TERM 1748 1544810 - 1544769 - R 100 -20.3 -3.14126 | opp_overlap 1544771 1544808, overlap 1544761 1544807 CGACAAAGGTCAAGA GAGGTCTTGCCGGAGGC GGTGGCTG GCCTCGGGCAAGACCTC TTGCAAAGGGTGTAT TERM 1749 1544771 - 1544808 + r 100 -17.1 -3.02263 | gap 1, opp_overlap 1544769 1544761 1544807 ACAAAGGTCAAGAGA GGTCTTGCCGGAGG-CGG TGG CTGGCCTCGGGCAAGACC TCTTGCAAAGGGTGT TERM 1750 1544836 - 1544889 + r 70 -9.6 -3.4082 | gap 1, opp_overlap 1544842 1544845, overlap 1544845 TGTATAGGGTGCCAC ATAAAATAACCGGGGCCCTGTTGCA GATCA TGCA-CAGGGCCCCGGTGGTGTCAC TTATCCGCTTATTTC TERM 1751 1544883 - 1544842 - R 100 -15.2 -4.52589 | gap 1, opp_overlap 1544836 1544845, overlap 1544845 GGGTGCCACATAAAA TAACCGGGGCCCTGTTGCA GATCA TGCA-CAGGGCCCCGGTGG TGTCACTTATCCGCT TERM 1752 1544880 - 1544845 - R 100 -21.3 -4.38141 | gap 1, opp_overlap 1544836 1544845, overlap 1544842 TGCCACATAAAATAA CCGGGGCCCTGTTGCA GATCA TGCA-CAGGGCCCCGG TGGTGTCACTTATCC TERM 1753 1544845 - 1544880 + r 100 -21.3 -2.67705 | gap 1, opp_overlap 1544845 1544842, overlap 1544836 TGCCACATAAAATAA CCGGGGCCCTGTTGCA GATCA TGCA-CAGGGCCCCGG TGGTGTCACTTATCC purB 1546268 - 1544898 - | adenylosuccinate lyase AHA_1414 1547010 - 1546396 - | hypothetical protein TERM 1754 1547129 - 1547167 + r 78 -11.7 -3.28712 | gap 1, overlap 1547109 1547110 TCTCCCTCAGGGAGA GGGTCAGGG-TGAGGGGG GTTA TCCCCTCATCCCCAACCC TTCTCCCGCGAGGGG trmU 1548329 - 1547223 - | tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase TERM 1755 1547779 - 1547801 + g 74 -5.4 -4.59773 | overlap 1547780 ATGAGATCCAGCTGC TCGGCGATGC GGC GCACCTCCGG TTTTTCAAGATCGCC AHA_1416 1549115 - 1548648 - | 7,8-dihydro-8-oxoguanine-triphosphatase TERM 1756 1548812 - 1548828 + g 72 -7.9 -4.11216 | CAGGATCCTCTGGAT GGTGCTG ACC CGGCGCC TTTTCAAGGTCGAAG TERM 1757 1549076 - 1549050 - G 73 -8.6 -3.99324 | TTCTACCAGCAGAAA GCGGCCCTGCCA GTG TACCAGGGCGGC CACGGTGAGGCGGGT AHA_1417 1550152 - 1549211 - | ribosomal large subunit pseudouridine synthase E AHA_1418 1550986 - 1550219 - | fructose specific permease TERM 1758 1550694 - 1550658 - G 93 -18.7 -3.34895 | overlap 1550660 GCCAGGGTGAAGCAA TAGTCGGGCAGCGCCTG GCC CAGGCGCTGCTCGGCCA GGGCGGCGCTGCCGG TERM 1759 1550692 - 1550660 - G 93 -19.1 -3.24329 | overlap 1550658 CAGGGTGAAGCAATA GTCGGGCAGCGCCTG GCC CAGGCGCTGCTCGGC CAGGGCGGCGCTGCC AHA_1419 1551292 - 1550987 - | phosphotransferase system enzyme II, fructose-specific TERM 1760 1551486 - 1551465 - R 100 -18.7 -5.26918 | ACAGGGGATAAAAAA CGGCCCGCC AGAA GGCGGGCCG AATGCACACTACGGA TERM 1761 1551542 - 1551508 - R 79 -11.2 -3.67296 | CACTACGGAGTGAAA CCGTGCGACCGGGCAG TGA CTGCCCGGATGCTAGG GCTCAGGCGGACTGG TERM 1762 1551604 - 1551620 + r 71 -10.1 -3.60475 | overlap 1551613 GTTCAGGCGGACTGG GTCGCCA AAG TGGCGGC TTTCAGCTCCCGCTT uhpT 1552997 - 1551591 - | sugar phosphate antiporter TERM 1763 1553122 - 1553084 - R 74 -8 -3.96483 | overlap 1553087 ACGCCACGGAAAGAA CAACAGGAAGCGGGCGCG GTG CGCGGCGAGTCCCTGTCG ATTGAACCCATGCCC TERM 1764 1553367 - 1553340 - R 100 -15.6 -4.42788 | opp_overlap 1553338 1553337, overlap 1553343 TCGAACCCGACAAAA GAGGAGGCCACC CGCA GGTGGCCTCGTC CGGTTTGGTCGCCGC TERM 1765 1553364 - 1553343 - R 87 -15.9 -2.88446 | opp_overlap 1553338 1553337, overlap 1553340 AACCCGACAAAAGAG GAGGCCACC CGCA GGTGGCCTC GTCCGGTTTGGTCGC AHA_1421 1555318 - 1553411 - | pts system, fructose-specific IIABC component TERM 1766 1555816 - 1555844 + r 90 -4.5 -5.40072 | overlap 1555817 GGCATTGGCCCGGTA GGGTGCAATGAAC GAA GTGAATTGCACCG TTTTTTTGGAGGCAG TERM 1767 1555817 - 1555843 + r 71 -8 -3.83561 | overlap 1555816 GCATTGGCCCGGTAG GGTGCAATGAAC GAA GTGAATTGCACC GTTTTTTTGGAGGCA TERM 1768 1555901 - 1555864 - R 79 -7.8 -4.42386 | gap 1, opp_overlap 1555868 1555871 TTTGGAGGCAGAAAA GGTAGAGGTGCAATGCG CTGCT CTTATTGCACC-CTACC GAATTGATGACGTGA TERM 1769 1556872 - 1556833 - R 80 -9.2 -4.18488 | ATTGAGTTGAATAAA GAGGCGGAATTCCACGCT ACCG ACCGTGGATTACAGCCTC CAGCCTGCTACGGTC AHA_1422 1557551 - 1557075 - | IAA acetyltransferase AHA_1423 1557880 - 1557605 - | hypothetical protein AHA_1424 1558440 - 1557976 - | MerR family transcriptional regulator AHA_1425 1558653 - 1559897 + | FMN-binding oxidoreductase malI-1 1560960 - 1559923 - | DNA-binding transcriptional repressor MalI TERM 1770 1560793 - 1560810 + g 71 -4.7 -4.40804 | GGCGGCGGCGCTGTT GGGCACG TAGT CGAGCTC TTTTATCGCCTGCTG malX 1561236 - 1562822 + | bifunctional maltose and glucose-specific PTS system components IICB TERM 1771 1562849 - 1562863 + F 90 -12.8 -3.85518 | GTTAACGTACGTCGG GGGGGC CAT GCCCCC TTGTTCATTGCTGTT TERM 1772 1563631 - 1563642 + G 72 -7.2 -4.15044 | ATTCCGGCCCTTGGC GGCG CCTA CGCC TTTATTGCCAACGCC AHA_1428 1562896 - 1564098 + | protein MalY TERM 1773 1564096 - 1564128 + T 95 -14.2 -3.53343 | gap 1, opp_overlap 1564098, overlap 1564103 GAGCTGCTGGCCAGA TAGCGCGCCGCCGCC CTCG GGCGGCGGT-TGCTA TTTCGAGGCGGCCTT TERM 1774 1564103 - 1564122 + T 100 -16.4 -3.45571 | opp_overlap 1564098, overlap 1564096 TGGCCAGATAGCGCG CCGCCGCC CTCG GGCGGCGG TTGCTATTTCGAGGC AHA_1429 1564785 - 1564126 - | hypothetical protein TERM 1775 1564839 - 1564850 + r 76 -3 -5.10064 | CGGGTTCCAGCTCAG CATT GCGC AATG TTTTTATATGTTGGC AHA_1430 1565289 - 1564945 - | hypothetical protein TERM 1776 1565406 - 1565386 - R 100 -14.7 -4.56358 | opp_overlap 1565386 1565388 GATACCGAGATAAAA GAAGGGGCC CTT GGCCCCCTC TGTCGTAGGTACTCT TERM 1777 1565386 - 1565406 + r 76 -12.5 -2.81642 | opp_overlap 1565386, overlap 1565388 GATACCGAGATAAAA GAAGGGGCC CTT GGCCCCCTC TGTCGTAGGTACTCT AHA_1431 1567817 - 1565433 - | pts system, fructose-specific IIABC component TERM 1778 1565656 - 1565672 + g 74 -5 -4.59511 | overlap 1565657 ACTTTCAGCTTGATG CCGGCC TTGGC GGCCGC TTTTTGCAGACTCTT AHA_1432 1568050 - 1568199 + | hypothetical protein TERM 1779 1568271 - 1568251 - T 100 -16.1 -4.3208 | opp_overlap 1568251 CGGCAGAATGTAAAA CCCCCGCCA GCA CGGCGGGGG TTTTTTATTGTGGTT TERM 1780 1568251 - 1568271 + T 100 -15.4 -5.59534 | opp_overlap 1568251 CGGCAGAATGTAAAA CCCCCGCC AGCAC GGCGGGGG TTTTTTATTGTGGTT AHA_1433 1568974 - 1568276 - | hypothetical protein TERM 1781 1568768 - 1568758 - G 73 -6.8 -4.30576 | GCGCCAGCAGTAAAA CGGA TAA TCCG CAGTAGCCTTTCATG TERM 1782 1568996 - 1568972 - G 100 -18.7 -5.04385 | opp_overlap 1568975 GAGACCGTCAAAAAA CAAGGGCCATC CTG GATGGCCCTTG TGGTCATGAGTCGAT TERM 1783 1568975 - 1568993 + r 95 -14.6 -3.44527 | opp_overlap 1568972 ACCGTCAAAAAACAA GGGCCATC CTG GATGGCCC TTGTGGTCATGAGTC manA 1570221 - 1569022 - | mannose-6-phosphate isomerase, class I TERM 1784 1570302 - 1570324 + H 95 -14.8 -3.19255 | opp_overlap 1570300 1570297 1570299 CGGACTATAACATGG GCGGTCGCGG GCA CCGCAACCGC TTGCCTCTCTCTTGA TERM 1785 1570969 - 1571024 + G 75 -14 -3.06915 | gap 1 CATCGCTTCAACGTC TCGGCCAGCCACCTGTCGCACCTGTTT CGC GAGCAGGGGC-ACATGCGCCTGGCCGA TTACATCAGCTGGGT AHA_1435 1570336 - 1571226 + | putative HTH-type transcriptional regulator YijO icd 1571429 - 1572682 + | isocitrate dehydrogenase TERM 1786 1572723 - 1572705 - T 100 -13.8 -4.36595 | opp_overlap 1572705 CACTGAAATGCAAAA CCGGCGCC ATG AGCGCCGG TTTTTTTATGGGTGA TERM 1787 1572705 - 1572723 + T 100 -13.1 -5.64274 | opp_overlap 1572705 CACTGAAATGCAAAA CCGGCGC CATGA GCGCCGG TTTTTTTATGGGTGA AHA_1437 1572946 - 1572770 - | hypothetical protein TERM 1788 1573002 - 1573021 + r 77 -4.8 -4.87665 | overlap 1572968 1573003 CAGGCTTTGTGCCGG ACGGGGCC ATCA GGCCACGG TTTTTCTGCATGCCC TERM 1789 1573260 - 1573244 - R 100 -13.7 -4.95155 | opp_overlap 1573244 CCCACACGAGAAAAA CCCGCCA GTC TGGCGGG TTTTATGGCTGAAAA TERM 1790 1573244 - 1573260 + r 100 -13.7 -4.42386 | opp_overlap 1573244 CCCACACGAGAAAAA CCCGCCA GTC TGGCGGG TTTTATGGCTGAAAA TERM 1791 1573299 - 1573279 - R 90 -4.6 -5.41143 | overlap 1573282 TATGGCTGAAAAAAA GATCAGCG GTGGG CGCTGGCC AGGTAGTTTTCCATC dsdA 1574612 - 1573281 - | D-serine dehydratase TERM 1792 1574278 - 1574291 + g 81 -4.5 -5.00616 | ATGGAACCCGAGATG GGCAG ATGG CTGTC TTTTTTCAGCAGCAA dsdC 1574911 - 1575870 + | DNA-binding transcriptional regulator DsdC AHA_1440 1575913 - 1576578 + | hypothetical protein TERM 1793 1576771 - 1576812 + G 90 -15.3 -3.72576 | gap 1, opp_overlap 1576804 1576806 TGTTGAGCTCTACTG GCAGCACTCTCTACC-TTAC TCG GCAACGGAAGAGAGTGCTGC TTTGCTCAAGCAGAG TERM 1794 1577162 - 1577140 - g 78 -10.6 -4.0371 | opp_overlap 1577147, overlap 1577149 TATCTGCGACATAAA GGGCAATCAG GGG CTGATTGGCC CCAGTGTTGGGCTGG TERM 1795 1577242 - 1577257 + G 71 -6.1 -4.25104 | AGTACTGAGAGAGTT GCAGG GGGGAA CCTGC TTTTACTGCCGCAAG AHA_1441 1576562 - 1577623 + | hypothetical protein TERM 1796 1577665 - 1577688 + T 100 -18.2 -3.56594 | opp_overlap 1577665, overlap 1577655 TGCCGGATATAAAAA GGGCCACCTC TTGC GAGGTGGCCC TTTCCAAACGTTTGG TERM 1797 1577688 - 1577665 - T 100 -18.2 -4.96848 | opp_overlap 1577665 1577655 TGCCGGATATAAAAA GGGCCACCTC TTGC GAGGTGGCCC TTTCCAAACGTTTGG TERM 1798 1577959 - 1577974 + T 89 -3.2 -5.49809 | overlap 1577961 GCGAGTGCGTAGTTT TCGTCG TTTG CGACTA TTTTTTTGCGGTTTA TERM 1799 1577961 - 1577972 + T 71 -5.8 -4.36993 | overlap 1577959 GAGTGCGTAGTTTTC GTCG TTTG CGAC TATTTTTTTGCGGTT TERM 1800 1578111 - 1578146 + T 100 -16.2 -4.15044 | opp_overlap 1578122, overlap 1578114 1578138 1578140 CATGGCAAGGCGTTG ATGGCAATCGACCGGC CTTG GCCGGTCGATTGCTGG TTTATTGGGCGGCGC TERM 1801 1578114 - 1578143 + T 100 -22.3 -3.10244 | opp_overlap 1578122, overlap 1578111 1578138 1578140 GGCAAGGCGTTGATG GCAATCGACCGGC CTTG GCCGGTCGATTGC TGGTTTATTGGGCGG smpB 1578668 - 1578180 - | SsrA-binding protein AHA_1444 1578838 - 1579272 + | oligoketide cyclase/lipid transport protein AHA_1445 1579265 - 1579612 + | protein YfjF TERM 1802 1579631 - 1579614 - T 79 -11.3 -3.74519 | opp_overlap 1579611 AACAGTCTGACTAAA TGCCTGC ATTG GCAGGCA TGATACTTCGTATAA TERM 1803 1579665 - 1579650 - T 83 -6.1 -4.83615 | TACTTCGTATAAAAA GTGCC AGCACA GGCAC GACACCGCATATAAA TERM 1804 1579697 - 1579684 - T 100 -9.5 -5.37043 | opp_overlap 1579684 ACCGCATATAAAAAA GGCGC CTTG GCGCC TTTTTTGATCCCGTC TERM 1805 1579684 - 1579697 + T 100 -9.5 -5.15634 | opp_overlap 1579684 ACCGCATATAAAAAA GGCGC CTTG GCGCC TTTTTTGATCCCGTC AHA_1446 1580375 - 1579740 - | nucleoside-diphosphate-sugar epimerases TERM 1806 1580490 - 1580466 - R 100 -14.4 -4.07568 | opp_overlap 1580471, overlap 1580471 CTGGCGGCGCTAAAA CAAAACCGGC GCGAG GCCGGTTTTG TGGATGGGATCAGAG TERM 1807 1580485 - 1580471 - R 95 -8.5 -5.07652 | opp_overlap 1580471, overlap 1580466 GGCGCTAAAACAAAA CCGGC GCGAG GCCGG TTTTGTGGATGGGAT TERM 1808 1580471 - 1580485 + r 83 -8.5 -4.42653 | opp_overlap 1580471 1580466 GGCGCTAAAACAAAA CCGGC GCGAG GCCGG TTTTGTGGATGGGAT AHA_1447 1580838 - 1580500 - | outer membrane lipoprotein OmlA TERM 1809 1580952 - 1580924 - R 95 -8.1 -5.10497 | overlap 1580926 AAGCCATGGAAAAAA TAGCCAGAGGG TGCCTGG CCCTCTGGCCG ATGGGATCACTCCTC TERM 1810 1580950 - 1580926 - R 95 -12.9 -4.17608 | overlap 1580924 GCCATGGAAAAAATA GCCAGAGGG TGCCTGG CCCTCTGGC CGATGGGATCACTCC AHA_1448 1581678 - 1580959 - | hypothetical protein AHA_1449 1584766 - 1581680 - | hypothetical protein AHA_1450 1584989 - 1585192 + | Flp/Fap pilin component superfamily protein AHA_1451 1585189 - 1585605 + | leader peptidase PilD AHA_1452 1585615 - 1586505 + | Flp pilus assembly protein CpaB AHA_1453 1586525 - 1587922 + | protein transporter, outer bacterial membrane secretin (secretin) family protein AHA_1454 1587934 - 1588482 + | hypothetical protein AHA_1455 1588486 - 1589619 + | hypothetical protein TERM 1811 1590911 - 1590864 - g 82 -11.1 -4.10164 | opp_overlap 1590864, overlap 1590860 GCAGTAGCAGAGAAA GCCCGTCAGGCCGGCTTGCTG AGCGAG CTGCAATCCTGCATGGCGGGC GACGGGGAGCCAGTC AHA_1456 1589619 - 1590932 + | CpaF AHA_1457 1590929 - 1591813 + | Flp pilus assembly protein TadB TERM 1812 1592369 - 1592380 + G 76 -5.8 -4.56775 | overlap 1592362 1592365 GCGCTGGAGCCTGGC CTGG CCCG CCAG TTTTTGCGCACCCAT AHA_1458 1591817 - 1592701 + | Flp pilus assembly protein TadC AHA_1459 1592721 - 1593485 + | Flp pilus assembly protein TadD TERM 1813 1593651 - 1593680 + G 91 -17.9 -3.17075 | CCGAATCGGCAGCGG GGCGGATCCCCTC GGCC GACGGGATCCGCC TTCGCTTGCAGCAAC AHA_1460 1593482 - 1593955 + | hypothetical protein AHA_1461 1593952 - 1594458 + | hypothetical protein AHA_1462 1594459 - 1595841 + | hypothetical protein TERM 1814 1595860 - 1595883 + T 75 -12.4 -2.88999 | opp_overlap 1595861, overlap 1595863 CATATGGTGCAAAAA AGAGGGGCCA AGTT TGGCCCCTCA TCTCATCTGTCGAGC TERM 1815 1595882 - 1595861 - T 100 -15.9 -5.02476 | opp_overlap 1595860 1595863 ATATGGTGCAAAAAA GAGGGGCCA AGTT TGGCCCCTC ATCTCATCTGTCGAG TERM 1816 1595863 - 1595880 + T 75 -12.7 -2.69406 | opp_overlap 1595861, overlap 1595860 ATGGTGCAAAAAAGA GGGGCCA AGTT TGGCCCC TCATCTCATCTGTCG AHA_1463 1597057 - 1595906 - | 1,3-propanediol dehydrogenase udp 1597450 - 1598205 + | uridine phosphorylase TERM 1817 1598226 - 1598258 + T 86 -12 -3.88583 | gap 1 CCACACCGAGTGGGG GGTGGGGGCCGTTGC GAAA GCG-CGGCCCCTATC TTTATCCGCCGTTTA AHA_1465 1599054 - 1598323 - | ribosomal large subunit pseudouridine synthase A TERM 1818 1599349 - 1599325 - g 76 -13.5 -3.17392 | CAGCCCCGAACTCAA GGTGCTGGCGG TCA CCACCAGCGCC GGCAACCAGACGCCG TERM 1819 1599887 - 1599901 + G 73 -3.4 -4.79223 | overlap 1599889 GTGGCCCAGTGCGTG GCCGGG CTG CTCGAC TTTTTCATGATCTAC rihA 1599239 - 1600174 + | ribonucleoside hydrolase 1 AHA_1467 1600209 - 1600679 + | hypothetical protein TERM 1820 1600750 - 1600722 - T 100 -20.4 -3.72788 | opp_overlap 1600722, overlap 1600725 GCTGACAAGATACAA GAAGGGCCAGCC TTGTC GGCTGGCCCTTC TTTATTTGGCGGATT TERM 1821 1600722 - 1600750 + T 100 -20.4 -4.42464 | opp_overlap 1600722 1600725 GCTGACAAGATACAA GAAGGGCCAGCC TTGTC GGCTGGCCCTTC TTTATTTGGCGGATT TERM 1822 1600747 - 1600725 - T 100 -16.3 -3.98649 | opp_overlap 1600722, overlap 1600722 GACAAGATACAAGAA GGGCCAGCC TTGTC GGCTGGCCC TTCTTTATTTGGCGG AHA_1468 1601112 - 1600816 - | hypothetical protein AHA_1469 1601710 - 1601141 - | hypothetical protein TERM 1823 1601830 - 1601801 - R 83 -12.1 -3.63515 | opp_overlap 1601807, overlap 1601803 1601804 1601807 CGTCAGCTTCAATAA CAGCAAGGCCCCG GATC CGGGGCCTTGGTC TGCGCTCACGAGGGC TERM 1824 1601828 - 1601803 - R 95 -14.7 -3.39784 | opp_overlap 1601807, overlap 1601801 1601804 1601807 TCAGCTTCAATAACA GCAAGGCCCCG GATC CGGGGCCTTGG TCTGCGCTCACGAGG TERM 1825 1601827 - 1601804 - R 95 -18.2 -2.63549 | opp_overlap 1601807, overlap 1601803 1601801 1601807 CAGCTTCAATAACAG CAAGGCCCCG GATC CGGGGCCTTG GTCTGCGCTCACGAG TERM 1826 1601807 - 1601824 + r 95 -14.1 -3.27022 | opp_overlap 1601804 1601803 1601801 1601807 CTTCAATAACAGCAA GGCCCCG GATC CGGGGCC TTGGTCTGCGCTCAC TERM 1827 1601824 - 1601807 - R 95 -14.1 -3.46509 | opp_overlap 1601807, overlap 1601804 1601803 1601801 CTTCAATAACAGCAA GGCCCCG GATC CGGGGCC TTGGTCTGCGCTCAC AHA_1470 1603472 - 1601850 - | methyl-accepting chemotaxis protein TERM 1828 1603529 - 1603539 + H 74 -3.2 -4.87665 | ACAGGCGCGACAAAC CTTG TCA CAGG TTTTTATGGCTGAAA TERM 1829 1604018 - 1604037 + G 74 -9.2 -3.82218 | TTCGTCACCGCCATC GCCAACCC CAAG GGGTGGGC TTTCATGGTCTCCCT AHA_1471 1603637 - 1604269 + | amino acid transporter LysE TERM 1830 1604303 - 1604319 + F 100 -15.1 -4.77438 | opp_overlap 1604303 TGAACCTGCCGAAAA GCCCCGC CCT GCGGGGC TTTTTCGTGATGCCT TERM 1831 1604319 - 1604303 - f 100 -15.1 -4.09739 | opp_overlap 1604303 TGAACCTGCCGAAAA GCCCCGC CCT GCGGGGC TTTTTCGTGATGCCT TERM 1832 1604814 - 1604853 + G 71 -13.1 -3.05384 | gap 1, opp_overlap 1604817 CACTGCGTCGCGCAA CGAGTGTGCATCA-CTTC ATCGA GAACCTGATGCACACTCG TTACGTGAACGGCGA AHA_1472 1604519 - 1605307 + | hypothetical protein TERM 1833 1605394 - 1605363 - T 100 -14.5 -3.88787 | opp_overlap 1605368, overlap 1605368 TGATAGCCTCATAAA GAAAAGCCCCGGG GTAATG CCCGGGGCTTTTT CGTTGGCGGCGCATC TERM 1834 1605368 - 1605389 + T 100 -14.4 -4.8622 | opp_overlap 1605363 1605368 GCCTCATAAAGAAAA GCCCCGGG GTAATG CCCGGGGC TTTTTCGTTGGCGGC TERM 1835 1605389 - 1605368 - T 100 -14.4 -4.99043 | opp_overlap 1605368, overlap 1605363 GCCTCATAAAGAAAA GCCCCGGG GTAATG CCCGGGGC TTTTTCGTTGGCGGC AHA_1473 1606637 - 1605429 - | Na(+)/H(+) antiporter TERM 1836 1606608 - 1606593 - G 73 -8.2 -4.00782 | opp_overlap 1606595 GTAGACCAGCAGAAA GGCGGC GATC ACCGCC AGGTTCTGGTAAATC AHA_1474 1607775 - 1606672 - | hyaluronidase, putative cvrA 1609545 - 1607818 - | potassium/proton antiporter TERM 1837 1609777 - 1609746 - R 100 -20.2 -2.89055 | opp_overlap 1609775 CAAAGTGGGCAGATA GCGACAGGGGCACC CGTG GGTGCCCCTGTCGG CGGGCTCGAGTCAGT AHA_1476 1609934 - 1609788 - | hypothetical protein AHA_1477 1610620 - 1609931 - | D-alanyl-D-alanine carboxypeptidase family protein dapE 1611744 - 1610617 - | succinyl-diaminopimelate desuccinylase AHA_1479 1612516 - 1611767 - | arsenate reductase TERM 1838 1612310 - 1612283 - GR 80 -9 -4.13767 | gap 1, overlap 1612284 TGGGGGAGGGGAAAA GTGC-CCGGCGCG GGA CGCGCCGGCGGGC ATCAGAGTTCGCTCT AHA_1480 1613223 - 1612312 - | LysR family transcriptional regulator TERM 1839 1613109 - 1613149 + gr 83 -13.1 -3.27923 | opp_overlap 1613095 1613090 AGCGGGCCAGTGCCC GGCTGACGGCCGGCTGGCT CAT GGCGAGCCGTTCGGCGGCC TTGGTGGTGTTACGC TERM 1840 1613438 - 1613454 + r 100 -15.1 -5.81412 | GTTGCTTGCTTAGTA CCCGCCG TCT CGGCGGG TTTTTTTTGCCTGCG TERM 1841 1613503 - 1613518 + r 86 -11.8 -3.7941 | opp_overlap 1613503 CAAAGAAGTACAAAA CGCGCC GGCG GGCGCG TTATTGTGAGGGGTG TERM 1842 1613518 - 1613503 - R 100 -11.8 -4.64157 | opp_overlap 1613503 CAAAGAAGTACAAAA CGCGCC GGCG GGCGCG TTATTGTGAGGGGTG AHA_1481 1613911 - 1613540 - | hypothetical protein TERM 1843 1613980 - 1613997 + H 71 -8.5 -3.81461 | overlap 1613993 CGTGGCAAAGGGATT CTAAAGG TTTG CCTTTAG TTTAAATTGCTGTTT AHA_1482 1614141 - 1615517 + | anaerobic C4-dicarboxylate uptake C (DcuC) family protein TERM 1844 1615520 - 1615548 + F 81 -13.9 -2.94032 | gap 1, opp_overlap 1615518, overlap 1615522 GCTGTTTATGTAACC GGGCGG-CGGAC GGCACG GTCCGTCCGCCC CTTTCATTCGGCCGT TERM 1845 1615522 - 1615549 + F 100 -14.1 -3.90588 | opp_overlap 1615518, overlap 1615520 TGTTTATGTAACCGG GCGGCGGACGG CACGGT CCGTCCGCCCC TTTCATTCGGCCGTC TERM 1846 1616193 - 1616239 + G 72 -13.7 -2.76263 | gap 2, overlap 1616190 GGCAAGGCCTCCCAC GCCGGCTCGGCGCTGAGCGAGGG GAT CTC-CGC-CATCACCGAGCTGGC TCATTGGGTGCTGGC AHA_1483 1615602 - 1616741 + | carboxypeptidase G2 TERM 1847 1616790 - 1616759 - T 100 -11.6 -4.87803 | opp_overlap 1616765, overlap 1616760 1616765 CAGCGTCAAAGAAAA GCAAAACGGGAGGC CATC GCCTCCCGTTTTTT ATCTGTCCTGTCGGT TERM 1848 1616789 - 1616760 - T 95 -15.1 -3.51958 | opp_overlap 1616765, overlap 1616759 1616765 AGCGTCAAAGAAAAG CAAAACGGGAGGC CATC GCCTCCCGTTTTT TATCTGTCCTGTCGG TERM 1849 1616784 - 1616765 - T 100 -15 -4.81644 | opp_overlap 1616765, overlap 1616760 1616759 CAAAGAAAAGCAAAA CGGGAGGC CATC GCCTCCCG TTTTTTATCTGTCCT TERM 1850 1616765 - 1616784 + T 100 -15 -5.43414 | opp_overlap 1616760 1616759 1616765 CAAAGAAAAGCAAAA CGGGAGGC CATC GCCTCCCG TTTTTTATCTGTCCT AHA_1484 1617489 - 1616833 - | hypothetical protein TERM 1851 1617571 - 1617602 + r 93 -15.8 -3.08464 | opp_overlap 1617573, overlap 1617575 TGGGGCAGGGCGCAA AACAGCAGGCCCCC GGGT GGGGGCCTGCTGGA TTGGCTGAATGGTGC TERM 1852 1617600 - 1617573 - R 100 -22.8 -4.09685 | opp_overlap 1617571 1617575 GGGCAGGGCGCAAAA CAGCAGGCCCCC GGGT GGGGGCCTGCTG GATTGGCTGAATGGT TERM 1853 1617575 - 1617598 + r 100 -19.6 -2.55213 | opp_overlap 1617573, overlap 1617571 GCAGGGCGCAAAACA GCAGGCCCCC GGGT GGGGGCCTGC TGGATTGGCTGAATG dcuB 1618968 - 1617625 - | anaerobic C4-dicarboxylate transporter TERM 1854 1619306 - 1619323 + r 95 -12.7 -4.07885 | opp_overlap 1619306 GACGGGCAACAAAAA GCCGACC CTGA GGTCGGC TTTTAAGGCAAAGTC TERM 1855 1619323 - 1619306 - R 100 -12.7 -5.07486 | opp_overlap 1619306 GACGGGCAACAAAAA GCCGACC CTGA GGTCGGC TTTTAAGGCAAAGTC asnC 1620745 - 1619345 - | asparaginyl-tRNA synthetase TERM 1856 1620164 - 1620188 + g 76 -8.6 -4.2349 | gap 1, overlap 1620176 CTTGTCATAGTCCAC CTTGCCG-GCA GGGG TGCGCGGCAGG TTTTCCATGTCCAGG AHA_1487 1622119 - 1621286 - | methyl-accepting chemotaxis protein TERM 1857 1622222 - 1622209 - R 74 -4.5 -4.72986 | overlap 1622218 CATTCTGATGAAAAA GAGTC AAAA GACCC TGCCTGGTCGGGCAG TERM 1858 1622241 - 1622218 - R 95 -11.7 -4.37991 | overlap 1622209 GAAAAAGAGTCAAAA GACCCTGCC TGGTCG GGCAGGGCC TGCCACGTCTGACTC bioA 1623718 - 1622255 - | adenosylmethionine-8-amino-7-oxononanoate transaminase bioB 1623721 - 1624809 + | biotin synthase TERM 1859 1625536 - 1625548 + G 73 -6.9 -4.36914 | TTGGCAAGGCGCTTG GCGTC GCT GGCGC TTTTGTCGGCGGCAG bioF 1624806 - 1626002 + | 8-amino-7-oxononanoate synthase TERM 1860 1625987 - 1626005 + F 80 -8.8 -4.08767 | opp_overlap 1625982 TGACGAGAGAGGGGG CGCCCATG GTG CATGAGCG TTTTCAGGCGGTCGA bioC 1625992 - 1626795 + | biotin biosynthesis protein BioC TERM 1861 1626858 - 1626825 - f 81 -11.7 -3.46511 | gap 1, opp_overlap 1626847 CGAGAGAATTGAGAA GCCGCTGC-CGGCC ATTGCGA GCCCGGGCAGCGGC CCCGTATTGAGGAGT TERM 1862 1627457 - 1627477 + G 95 -10.3 -4.66609 | AATCTGGACACCCTG CGGGGCTTG CTG CCGGCCCCG TTTTTGGGTGAAATA bioD 1626878 - 1627558 + | dethiobiotin synthase htpX 1627671 - 1628543 + | M48B family peptidase HtpX TERM 1863 1628550 - 1628597 + T 90 -16.4 -2.75963 | opp_overlap 1628564, overlap 1628559 1628564 CGCGGTTAAGCGTAC CGTACCAATGAAAACGGCTGCC CTCG GGCAGCCGTTTTGCTTTGTGCG CTTTGCGCTACAGCT TERM 1864 1628559 - 1628588 + T 86 -15.1 -2.9665 | opp_overlap 1628564, overlap 1628550 1628564 GCGTACCGTACCAAT GAAAACGGCTGCC CTCG GGCAGCCGTTTTG CTTTGTGCGCTTTGC TERM 1865 1628564 - 1628583 + T 100 -15 -4.61873 | opp_overlap 1628564, overlap 1628559 1628550 CCGTACCAATGAAAA CGGCTGCC CTCG GGCAGCCG TTTTGCTTTGTGCGC TERM 1866 1628583 - 1628564 - T 100 -15 -4.45544 | opp_overlap 1628564 1628559 1628550 CCGTACCAATGAAAA CGGCTGCC CTCG GGCAGCCG TTTTGCTTTGTGCGC AHA_1494 1630317 - 1628605 - | methyl-accepting chemotaxis protein TERM 1867 1629775 - 1629802 + g 83 -9.2 -4.3534 | gap 1 CTTGTTCTGGTGATA GGCC-TTGTCATG CAT CATGGCGATGGCC TTTTGCTGGTTGGCG TERM 1868 1630371 - 1630387 + r 74 -2.1 -5.00467 | opp_overlap 1630370 GTCAGACGGCAAAGG CCGCTAC GTC GGAGGGG TTTTGTTGTTGTTGC TERM 1869 1630514 - 1630491 - R 100 -17.4 -4.48877 | opp_overlap 1630505 1630506 GAAACAGGGAGAAAA CGGCCGGGAG CGGG CCCCCGGCCG GTGGGGTTATCGCTG AHA_1495 1632528 - 1630540 - | flavodoxin reductase family 1 protein TERM 1870 1633141 - 1633153 + G 71 -6.2 -4.33417 | overlap 1633138 CTGGTGATCGGTGCC GGCC CCTCC GGCC TTTCTTGTGCCTGGC AHA_1496 1632745 - 1634391 + | putative glutamate synthase (NADPH) small subunit TERM 1871 1634862 - 1634884 + G 71 -9 -3.77607 | TTGGTCGCCCACAGC GTCACCCTGC AGT GCCGGGTGCC TTTCATCCACTTCTT TERM 1872 1636284 - 1636313 + G 71 -8.5 -3.86015 | gap 1, opp_overlap 1636276 1636273, overlap 1636284 CAGACCAGCGATTAT C-CGCTGCCGCTGG CGC CGGGTGGCAGCGAG TTTGTCCAGCGCGTC TERM 1873 1637717 - 1637691 - g 78 -5.1 -4.7497 | overlap 1637692 CTGACCCAGCAAAAA CGCGCC-GTGGCC TCC GGTCACTGGC-CG CTGATGCGCTACAAC nifJ-1 1634388 - 1637963 + | pyruvate:ferredoxin (flavodoxin) oxidoreductase TERM 1874 1638012 - 1637988 - T 88 -9.9 -4.386 | opp_overlap 1637992, overlap 1637992 TAACTCTGCATAAAA CGAAGCGGGCC ACT GGCCCGCTTTT TATCAATAGATGGGA TERM 1875 1637992 - 1638008 + T 100 -15.1 -4.88067 | opp_overlap 1637988 1637992 TCTGCATAAAACGAA GCGGGCC ACT GGCCCGC TTTTTATCAATAGAT TERM 1876 1638008 - 1637992 - T 95 -15.1 -3.75115 | opp_overlap 1637992, overlap 1637988 TCTGCATAAAACGAA GCGGGCC ACT GGCCCGC TTTTTATCAATAGAT TERM 1877 1639441 - 1639469 + T 100 -19.1 -3.38564 | opp_overlap 1639446, overlap 1639446 ATTTTCGTATAGGTA TCAAATACCGCCA TCT TGGCGGTATTTGA TTATCAGTAGGTTTA TERM 1878 1639446 - 1639464 + T 100 -13.2 -4.00868 | opp_overlap 1639446, overlap 1639441 CGTATAGGTATCAAA TACCGCCA TCT TGGCGGTA TTTGATTATCAGTAG TERM 1879 1639464 - 1639446 - T 93 -13.2 -3.78022 | opp_overlap 1639446 1639441 CGTATAGGTATCAAA TACCGCCA TCT TGGCGGTA TTTGATTATCAGTAG TERM 1880 1639743 - 1639725 - T 100 -13.1 -5.06816 | AGCGGCCAACAAAAA GCCCGGC GTTGG GCCGGGC TGGCAGGATAAGTTG AHA_1498 1639999 - 1639784 - | hypothetical protein TERM 1881 1640263 - 1640249 - R 90 -8.5 -4.72272 | opp_overlap 1640249 GGCGGGCAGCAAAAA GGGGC GCAGG GCCCC TTCTTGGTAACAGGT AHA_1499 1640876 - 1640286 - | hypothetical protein AHA_1500 1642234 - 1640888 - | Na+ driven multidrug efflux pump TERM 1882 1642376 - 1642343 - R 100 -23.2 -2.93207 | overlap 1642332 AAGAGGAGGCAGAGA GCGCGGGCCCTGCC ACCATG GGCAGGGCCCGCAC TGGATCAGGCCGGGG AHA_1501 1644204 - 1642381 - | sulfate permease family protein AHA_1502 1644895 - 1644275 - | hypothetical protein AHA_1503 1645142 - 1644885 - | hypothetical protein cysM 1645277 - 1646182 + | cysteine synthase B AHA_1505 1646348 - 1646629 + | hypothetical protein TERM 1883 1646656 - 1646632 - T 100 -17.1 -3.03441 | opp_overlap 1646627 1646633 1646635, overlap 1646635 CATCAGCTGGTAACA GGAGGCCCCGC GAT GCGGGGCCTCT GTCTGATTACTCCCA TERM 1884 1646633 - 1646655 + T 100 -20.6 -3.02096 | opp_overlap 1646632 1646635, overlap 1646627 1646635 ATCAGCTGGTAACAG GAGGCCCCGC GAT GCGGGGCCTC TGTCTGATTACTCCC TERM 1885 1646635 - 1646653 + T 100 -17.4 -3.06361 | opp_overlap 1646632 1646635, overlap 1646633 1646627 CAGCTGGTAACAGGA GGCCCCGC GAT GCGGGGCC TCTGTCTGATTACTC TERM 1886 1646653 - 1646635 - T 91 -17.4 -2.74192 | opp_overlap 1646635 1646633 1646627, overlap 1646632 CAGCTGGTAACAGGA GGCCCCGC GAT GCGGGGCC TCTGTCTGATTACTC AHA_1506 1647847 - 1646663 - | NAD-dependent methanol dehydrogenase AHA_1507 1648380 - 1647865 - | hypothetical protein AHA_1508 1648963 - 1648361 - | TetR family transcriptional regulator AHA_1509 1650404 - 1648974 - | coniferyl aldehyde dehydrogenase TERM 1887 1650709 - 1650732 + G 93 -8.1 -5.00884 | opp_overlap 1650708 1650709 GAATTTGCCCAGAAG CTGGCGCTG CAGCAT CAGCGCGAG TTTTTTGCCGCGGGT AHA_1510 1650616 - 1650909 + | hypothetical protein TERM 1888 1650930 - 1650956 + T 100 -22.4 -4.38712 | opp_overlap 1650930 1650933 CCGTTGAATCAACAA CAACAGGGCCCG TCG CGGGCCCTGTTG TTTTATGGCGGTCAC TERM 1889 1650956 - 1650930 - T 100 -22.4 -3.81146 | opp_overlap 1650930, overlap 1650933 CCGTTGAATCAACAA CAACAGGGCCCG TCG CGGGCCCTGTTG TTTTATGGCGGTCAC TERM 1890 1650953 - 1650933 - T 100 -18.3 -4.0342 | opp_overlap 1650930, overlap 1650930 TTGAATCAACAACAA CAGGGCCCG TCG CGGGCCCTG TTGTTTTATGGCGGT AHA_1511 1651417 - 1650968 - | NlpC TERM 1891 1651737 - 1651720 - H 70 -5.5 -4.49556 | GTGCCATCAAATAAA TGGCAAG GGAC CCCGCCA TTTTCACCGCCAATA AHA_1512 1652272 - 1654137 + | hemolysin TERM 1892 1654168 - 1654185 + T 100 -14.1 -5.28778 | opp_overlap 1654168 CGGCCAAGACAACAA CGCCGGC AAGT GCCGGCG TTTTTTATGGATGGT TERM 1893 1654185 - 1654168 - T 100 -14.1 -3.9644 | opp_overlap 1654168 CGGCCAAGACAACAA CGCCGGC AAGT GCCGGCG TTTTTTATGGATGGT AHA_1513 1655112 - 1654204 - | hydrogen peroxide-inducible genes activator TERM 1894 1654660 - 1654639 - G 70 -10.1 -3.64703 | opp_overlap 1654656 CGTCTTGCAGTGAAA GCCGCCGAT CTCC ACCGGCAGC GCCAGGATCAGCAGG TERM 1895 1654686 - 1654708 + g 70 -12 -3.24456 | overlap 1654656 GCAGGTCGAGCTGAC CCTGCTCCAG CTG CTTGAGCAGG TTGGTGGTGGTGTCT TERM 1896 1655810 - 1655799 - g 85 -3.6 -5.30575 | GAAAAAGGCAAAAAA GGCA TGAC CGCC TCTCCGGACGGCGTT AHA_1514 1655259 - 1655861 + | alkyl hydroperoxide reductase TsaA TERM 1897 1655907 - 1655890 - T 100 -11.3 -4.70659 | opp_overlap 1655890 CCGGATAGTGAAAAA CCGATGC CCAG GCATCGG TTTTTTTATGGCTGT TERM 1898 1655890 - 1655907 + T 100 -11.3 -5.65177 | opp_overlap 1655890 CCGGATAGTGAAAAA CCGATGC CCAG GCATCGG TTTTTTTATGGCTGT TERM 1899 1655960 - 1655943 - T 100 -14.1 -5.28176 | opp_overlap 1655943 GGCAGGCATAAAAAA GCGCGCC CTTT GGCGCGC TTTGGTCATGGGTGT TERM 1900 1655943 - 1655960 + T 100 -14.1 -3.80014 | opp_overlap 1655943 GGCAGGCATAAAAAA GCGCGCC CTTT GGCGCGC TTTGGTCATGGGTGT AHA_1515 1656946 - 1655981 - | putative alpha-L-glutamate ligase-like protein TERM 1901 1656668 - 1656686 + g 70 -11.6 -3.14132 | CAGGATCCCCTTGCC GCCGGAGC CAC GCGCCGGC TTGATGCAGAAGCCC AHA_1516 1658488 - 1656950 - | gonadoliberin III-related protein TERM 1902 1658299 - 1658283 - G 73 -10.8 -3.58343 | TTCATCAGGGTGAAA CCGGGC TGGGT GCCCGG AATAGCCAGGGAGGC AHA_1517 1659208 - 1658492 - | ATP-dependent Zn proteases AHA_1518 1660364 - 1659333 - | methyltransferase, putative TERM 1903 1660185 - 1660209 + gr 73 -10.7 -3.44051 | GTTGAGGGCGCGGTT CCAGCGCGG CAGATCA CCGTGCTGG TTGTCGTGCTGCCAG AHA_1519 1661056 - 1660307 - | putative methyltransferase TERM 1904 1661072 - 1661093 + r 78 -5.8 -4.72029 | GCTGGCGCAACCTGA CAGCCGGT GCGCGA ACCGACTG TTTTGTTCAATTGAA AHA_1520 1662298 - 1661450 - | hypothetical protein TERM 1905 1661889 - 1661871 - G 76 -8.8 -4.15044 | CCCTTGGCGAAGAAA TCGGGGTG GCG CACCTCGA GGGCATAGCGAAACG aspS 1662491 - 1664497 + | aspartyl-tRNA synthetase TERM 1906 1664533 - 1664516 - f 86 -12.7 -3.73775 | opp_overlap 1664516 GTTACCGGCAGCAAA GGCCGCA GCAA TGCGGCC TTTCCCTTGCATTAG TERM 1907 1664516 - 1664533 + F 90 -12.7 -3.78409 | opp_overlap 1664516 GTTACCGGCAGCAAA GGCCGCA GCAA TGCGGCC TTTCCCTTGCATTAG TERM 1908 1664640 - 1664626 - g 74 -9.2 -3.92324 | overlap 1664629 TGGGCCAACATCAAA CACCGC AAG GCGGCG CAAGACGCCAAGCGC AHA_1522 1664593 - 1665333 + | hypothetical protein TERM 1909 1665401 - 1665384 - f 95 -12.7 -4.07568 | opp_overlap 1665384 TCGCCCCCGTTAAAA CGGCAGC CTCG GCTGCCG TTTTTCTTGTGATGG TERM 1910 1665384 - 1665401 + F 100 -12.7 -5.22006 | opp_overlap 1665384 TCGCCCCCGTTAAAA CGGCAGC CTCG GCTGCCG TTTTTCTTGTGATGG AHA_1523 1665616 - 1667232 + | integral membrane protein TERM 1911 1667444 - 1667426 - T 100 -16 -5.14163 | opp_overlap 1667426 ATCTATCAATAAAAA CGGCAGCC ACT GGCTGCCG TTTTTTATTTCGCAA TERM 1912 1667426 - 1667444 + T 100 -16 -5.63517 | opp_overlap 1667426 ATCTATCAATAAAAA CGGCAGCC ACT GGCTGCCG TTTTTTATTTCGCAA nagC 1668747 - 1667470 - | N-acetylglucosamine repressor nagA 1669834 - 1668689 - | N-acetylglucosamine-6-phosphate deacetylase nagB 1670644 - 1669844 - | glucosamine-6-phosphate deaminase nagE 1670918 - 1672372 + | pts system, N-acetylglucosamine-specific IIBC component TERM 1913 1672440 - 1672422 - f 100 -17.4 -3.49618 | TGTTGACATAACTAA GGGCCCCG CCT CGGGGCCC CATATAAAAAAAGCC AHA_1528 1672495 - 1675158 + | chitobiase TERM 1914 1675181 - 1675200 + F 77 -11.4 -3.53091 | opp_overlap 1675181 1675177 1675176 1675195, overlap 1675199 CAATCCATAACGCAA GGTGGGTC GCAA GACCCGCC TTTCCCAAGCCCGAT TERM 1915 1675241 - 1675195 - f 91 -15.2 -3.01791 | opp_overlap 1675181 1675199, overlap 1675181 1675177 1675176 AGGTGGGTCGCAAGA CCCGCCTTTCCCAAGCCCGATA ACG CATCGGCCTTGGGAAAGGTTGA CTGTGAGTGTGAGCC TERM 1916 1675199 - 1675237 + F 100 -20.5 -3.14026 | opp_overlap 1675181 1675177 1675176 1675195, overlap 1675181 GGGTCGCAAGACCCG CCTTTCCCAAGCCCGAT AACGC ATCGGCCTTGGGAAAGG TTGACTGTGAGTGTG TERM 1917 1675303 - 1675323 + F 100 -8.2 -5.53991 | overlap 1675305 TTTTTCATCACCTTG AACCCCGC CTCGC GCGGGGTC TTTTTTTCGTCAGTC TERM 1918 1675305 - 1675321 + F 93 -10.8 -4.40552 | overlap 1675303 TTTCATCACCTTGAA CCCCGC CTCGC GCGGGG TCTTTTTTTCGTCAG glnS 1675508 - 1677169 + | glutaminyl-tRNA synthetase TERM 1919 1677198 - 1677181 - T 75 -12.7 -2.66991 | opp_overlap 1677181, overlap 1677180 1677178 CTGATAACAGAAGAG GGCAGGG GAGA CCCTGCC TTTTCTTGATCACGA TERM 1920 1677181 - 1677198 + T 100 -12.7 -4.71426 | opp_overlap 1677181 1677180 1677178 CTGATAACAGAAGAG GGCAGGG GAGA CCCTGCC TTTTCTTGATCACGA TERM 1921 1677250 - 1677289 + T 75 -12.4 -2.9914 | gap 1, opp_overlap 1677261, overlap 1677261 GGGCTCTAAATGACG GACA-CAAAAAAGCCAGCG TGA TGCTGGCTTTTTTATTGTC TCTATCTGGCGGGTC TERM 1922 1677277 - 1677261 - T 100 -9.4 -5.38047 | opp_overlap 1677250 1677261 GACGGACACAAAAAA GCCAGC GTGAT GCTGGC TTTTTTATTGTCTCT TERM 1923 1677261 - 1677277 + T 100 -10.1 -5.62045 | opp_overlap 1677261, overlap 1677250 GACGGACACAAAAAA GCCAGCG TGA TGCTGGC TTTTTTATTGTCTCT fur 1677731 - 1677303 - | ferric uptake regulation protein AHA_1531 1677967 - 1678458 + | hypothetical protein TERM 1924 1678495 - 1678468 - T 100 -20 -4.43844 | opp_overlap 1678471 1678474 GCATGAGCCAGAAAA CAACAAGGGCCC CGCG GGGCCCTTGTTG TCAGAGAGGCTGGCG TERM 1925 1678471 - 1678492 + T 100 -15.9 -3.28924 | opp_overlap 1678468, overlap 1678474 TGAGCCAGAAAACAA CAAGGGCCC CGCG GGGCCCTTG TTGTCAGAGAGGCTG TERM 1926 1678474 - 1678489 + T 86 -11.8 -3.78934 | opp_overlap 1678468, overlap 1678471 GCCAGAAAACAACAA GGGCCC CGCG GGGCCC TTGTTGTCAGAGAGG AHA_1532 1679043 - 1678519 - | flavodoxin AHA_1533 1679379 - 1679083 - | LexA regulated protein AHA_1534 1679621 - 1679400 - | hypothetical protein AHA_1535 1680447 - 1679677 - | esterase YbfF AHA_1536 1680556 - 1681248 + | SeqA protein TERM 1927 1681522 - 1681548 + G 74 -9.3 -3.87994 | CTGGTGGAGTATCGC CAGCAGGCCGG CATCA CGGGCCCGCTG TTTGTCGGCATGGAT pgm 1681306 - 1682955 + | phosphoglucomutase TERM 1928 1682973 - 1683019 + T 100 -17.5 -3.17194 | opp_overlap 1682986, overlap 1682986 TCGACTCAAGCACCC GCGGAATATGAAAGAGGAGCC TTGAT GGCTCCTCTTTTTTATTGCGC TTGAGTTGGAGCCGT TERM 1929 1682986 - 1683006 + T 100 -12.6 -5.4756 | opp_overlap 1682986, overlap 1682973 CCGCGGAATATGAAA GAGGAGCC TTGAT GGCTCCTC TTTTTTATTGCGCTT TERM 1930 1683006 - 1682986 - T 93 -12.6 -3.92324 | opp_overlap 1682973 1682986 CCGCGGAATATGAAA GAGGAGCC TTGAT GGCTCCTC TTTTTTATTGCGCTT AHA_1538 1683921 - 1683040 - | drug/metabolite exporter family transporter AHA_1539 1684018 - 1684500 + | MarR family transcriptional regulator AHA_1540 1685235 - 1684525 - | transcriptional regulator, TetR family protein TERM 1931 1685305 - 1685273 - gR 75 -12.8 -2.66692 | gap 1, overlap 1685272 1685275 TACGATGAGCAGAAG CAGCGCCAGGTACCG GCCC CGGTA-CTGGCCCTG ATGGAGGAGGCGACC AHA_1541 1685228 - 1685893 + | AhpC/Tsa family protein TERM 1932 1685923 - 1685895 - TR 81 -11.8 -3.59979 | gap 1, opp_overlap 1685895, overlap 1685896 1685899 CGGGGGCACTGTAAA CGCACACTGCACC CGAA GGCGCAGTGTG-G ATGGTTGGCAAGGCG TERM 1933 1685923 - 1685896 - TR 72 -12 -2.75844 | opp_overlap 1685895, overlap 1685895 1685899 GGGGGCACTGTAAAC GCACACTGCACC CGAA GGCGCAGTGTGG ATGGTTGGCAAGGCG TERM 1934 1685920 - 1685899 - TR 72 -12.3 -2.65354 | opp_overlap 1685895, overlap 1685895 1685896 GGCACTGTAAACGCA CACTGCACC CGAA GGCGCAGTG TGGATGGTTGGCAAG TERM 1935 1685935 - 1685953 + Tr 100 -17.4 -5.24129 | GTGGATGGTTGGCAA GGCGGCCC TGA GGGCCGCC TTTTTTATCCGGCCG mltB-1 1687074 - 1685971 - | murein hydrolase B AHA_1543 1687772 - 1687170 - | phosphatidylglycerophosphate synthase AHA_1544 1688425 - 1687787 - | ABC transporter, ATP-binding protein AHA_1545 1690125 - 1688449 - | inner membrane ABC transporter permease protein YnjC TERM 1936 1690077 - 1690062 - G 74 -4.6 -4.66833 | overlap 1690063 1690065 1690066 GCGGAAGGCCAAAAA CCAGGG CGCA CCCTGC CGTGAACAGGGGGCG TERM 1937 1690094 - 1690066 - G 74 -14.5 -2.55019 | overlap 1690063 1690062 1690065 AAGGCCAAAAACCAG GGCGCACCCTGCC GTG AACAGGGGGCGCC AATCAAGCGAAGAGC AHA_1546 1691405 - 1690125 - | hypothetical protein TERM 1938 1690944 - 1690926 - GR 74 -10.2 -3.53224 | opp_overlap 1690937 CAGCTCCCGGGTAAA GGGGGTGC CGA GCAGCCCC TGCTCCTTGAGCGCC AHA_1547 1693483 - 1691315 - | mercuric reductase, membrane-associated TERM 1939 1691648 - 1691681 + gr 70 -8.7 -3.6217 | overlap 1691647 GGCCAGCTCGAAGCG GGTCAGCTCGAAGGG GATG CCCTGCGCCCTGGCC TCTTTCTGATTGAGG TERM 1940 1692426 - 1692448 + gr 76 -12 -3.06796 | ACCTCCACCTCCCAG GGGGAGACAA GCT TTGCCTCCCC TTGGATGCACTCCAC TERM 1941 1693250 - 1693237 - GR 71 -9.5 -3.48924 | overlap 1693246 GCAGCCCCCAGACAA CGCCG AACA CGGCG CTGCCAGCCAGGGTG TERM 1942 1693460 - 1693430 - GR 87 -8.3 -4.66833 | gap 1, opp_overlap 1693456 GTCGAAGGCGAAAAA GGCGCCGATGA-GG CAGC CCATCACCAGCACC AGCAGCAGGCGGGAG pcaC 1694064 - 1693483 - | hypothetical protein AHA_1549 1694750 - 1694076 - | hypothetical protein TERM 1943 1695288 - 1695301 + G 79 -8.1 -4.34267 | GAGGACTGGGCGGCG CGCCA TCCC TGGCG TTTTGGCTTCTATGC AHA_1550 1694802 - 1695362 + | peptide methionine sulfoxide reductase MsrA AHA_1551 1695655 - 1695377 - | peptidyl-prolyl cis-trans isomerase C AHA_1552 1696111 - 1695737 - | hypothetical protein TERM 1944 1697150 - 1697136 - g 71 -11.4 -3.53343 | AAGCTGCCGCTGAAA GAGGGG GAT CCCCTC AACCACGGTAAATAC AHA_1553 1696686 - 1698461 + | OMP85 family outer membrane protein AHA_1554 1698541 - 1702296 + | hypothetical protein TERM 1945 1702344 - 1702309 - f 93 -15.6 -3.1372 | opp_overlap 1702317, overlap 1702317 TAGCGGGCAGGAAGA GACAAAAACGGGAGGC ACAA GCCTCCCGTTTTTATT GGTGGCATTGATGCG TERM 1946 1702317 - 1702336 + F 100 -15 -5.1356 | opp_overlap 1702309 1702317 AGGAAGAGACAAAAA CGGGAGGC ACAA GCCTCCCG TTTTTATTGGTGGCA TERM 1947 1702336 - 1702317 - f 100 -15 -5.10968 | opp_overlap 1702317, overlap 1702309 AGGAAGAGACAAAAA CGGGAGGC ACAA GCCTCCCG TTTTTATTGGTGGCA TERM 1948 1702430 - 1702402 - f 84 -13.2 -3.06515 | opp_overlap 1702403 1702408, overlap 1702408 GGGGATGCTGAAAAG CGAAAACCCGGC GCGAG GCCGGGTTTTCT TGAATGATGGTGGAG TERM 1949 1702403 - 1702429 + F 100 -16.7 -3.10715 | opp_overlap 1702402 1702408, overlap 1702408 GGGATGCTGAAAAGC GAAAACCCGGC GCGAG GCCGGGTTTTC TTGAATGATGGTGGA TERM 1950 1702408 - 1702424 + F 100 -10.8 -4.69053 | opp_overlap 1702402 1702408, overlap 1702403 GCTGAAAAGCGAAAA CCCGGC GCGAG GCCGGG TTTTCTTGAATGATG TERM 1951 1702424 - 1702408 - f 93 -10.8 -4.4267 | opp_overlap 1702408 1702403, overlap 1702402 GCTGAAAAGCGAAAA CCCGGC GCGAG GCCGGG TTTTCTTGAATGATG AHA_1557 1702784 - 1703299 + | hypothetical protein TERM 1952 1703349 - 1703333 - T 100 -10.8 -4.72272 | opp_overlap 1703333 TTCGGGCAGCAAAAA GGCGGG GAGAT CCCGCC TTTGTCGTTGTTGGC TERM 1953 1703333 - 1703349 + T 88 -11.5 -4.14257 | opp_overlap 1703333 TTCGGGCAGCAAAAA GGCGGGG AGA TCCCGCC TTTGTCGTTGTTGGC yfiA-1 1703719 - 1703381 - | ribosomal subunit interface protein TERM 1954 1703467 - 1703480 + g 73 -8.1 -4.09739 | CGGTGTGGCGGTTGA GCTGG CGTT CCAGC TTTTGCCCCAGTTCG AHA_1559 1704091 - 1706607 + | MorA TERM 1955 1706664 - 1706645 - f 86 -15 -2.92522 | opp_overlap 1706643, overlap 1706640 1706630 TGAGGGAATATGACA CCACCGCC AACG GGCGGTGG CATTGCCTCTCAATG TERM 1956 1706806 - 1706825 + G 78 -10 -4.09739 | gap 1 GCTTATGACGCGGTG CGGGCC-GA CGA TCAGGCCCG TTTTCAGCAAATTCG TERM 1957 1708064 - 1708048 - g 70 -12.3 -3.14344 | opp_overlap 1708036 CAGGGCTGGCATGAA CTGGCCA TTC TGGCCAG CATCCGGGCCGAGGC slt 1706692 - 1708608 + | soluble lytic murein transglycosylase AHA_1561 1708788 - 1709786 + | HTH-type transcriptional regulator GalR TERM 1958 1709783 - 1709828 + F 86 -10.4 -4.08064 | gap 1, overlap 1709787 1709787 ACGGGAATCCGTCGC CTGAGTGGCCGACATTGGCCC TGAAT GGGCCAATGTC-GCTCCCCTG TTTTGCGGAAAAATT TERM 1959 1709787 - 1709825 + F 83 -15.3 -2.78032 | overlap 1709783 1709787 GAATCCGTCGCCTGA GTGGCCGACATTGGCCC TGAAT GGGCCAATGTCGCTCCC CTGTTTTGCGGAAAA TERM 1960 1709787 - 1709826 + F 86 -12.9 -3.63744 | gap 1, overlap 1709787 1709783 GAATCCGTCGCCTGA GTGG-CCGACATTGGCCC TGAAT GGGCCAATGTCGCTCCCC TGTTTTGCGGAAAAA TERM 1961 1710003 - 1710021 + F 100 -11 -6.06723 | CTTCGTTACTTTCGA CGGTCATC ATG GATGGCCG TTTTTTTTTGCCAGG AHA_1562 1710045 - 1710857 + | NAD dependent epimerase/dehydratase family protein AHA_1563 1710900 - 1711382 + | acyl-CoA thioester hydrolase YciA AHA_1564 1711679 - 1711389 - | hypothetical protein TERM 1962 1712113 - 1712123 + G 73 -8.2 -4.0371 | opp_overlap 1712113 TGACGGTCGCCAAGA CGCC CCA GGCG TTTGTGTGCGGCGTG AHA_1565 1711725 - 1712570 + | endonuclease/exonuclease/phosphatase family protein TERM 1963 1712633 - 1712613 - T 100 -12.6 -5.71712 | opp_overlap 1712613 TTCCAGATAAAAAAA TACCCCGC TTTTG GCGGGGTA TTTTTTTATGAAGTG TERM 1964 1712613 - 1712633 + T 100 -13.3 -5.626 | opp_overlap 1712613 TTCCAGATAAAAAAA TACCCCGCT TTT GGCGGGGTA TTTTTTTATGAAGTG TERM 1965 1712698 - 1712678 - T 72 -11.1 -3.14132 | overlap 1712680 GTTGTTCTTCACGAA CAGGGTCAG TTC CTGACCCGG CTTGAGGTAATCGCT TERM 1966 1712696 - 1712680 - T 76 -12.3 -3.13403 | overlap 1712678 TGTTCTTCACGAACA GGGTCAG TTC CTGACCC GGCTTGAGGTAATCG AHA_1566 1714204 - 1712657 - | membrane-bound lytic murein transglycosylase D TERM 1967 1714259 - 1714246 - R 70 -9.5 -3.4072 | CAGCTCGCATCATAA GGGGC AATG GCCCC CTGATCAAGGTTTGT TERM 1968 1714298 - 1714283 - R 77 -4 -5.00616 | gap 1, overlap 1714285 GGTTTGTTCAAAAAA CG-TCCT TCC AGGATCG CAGCACGGTGAAGGT AHA_1567 1715039 - 1714275 - | hydroxyacylglutathione hydrolase AHA_1569 1715099 - 1715833 + | methyltransferase rnhA 1716285 - 1715821 - | RNase H dnaQ 1716338 - 1717072 + | DNA polymerase III, epsilon subunit TERM 1969 1718171 - 1718149 - g 86 -7.7 -4.75404 | AAATTCGAGGAAAAA CAGAGCAGC GGCTG GCTGATCTG GCTGCTGGGTGGGGT AHA_1571 1717069 - 1718334 + | hypothetical protein TERM 1970 1718355 - 1718372 + T 91 -9.8 -4.63048 | opp_overlap 1718355 CAACCGCACGAAAAA GCCGCC CATCGA GGCGGC TTTGTTATTTATGGG TERM 1971 1718372 - 1718355 - T 100 -10.5 -4.74801 | opp_overlap 1718355 CAACCGCACGAAAAA GCCGCCC ATCG AGGCGGC TTTGTTATTTATGGG AHA_1572 1719933 - 1718416 - | HD domain-containing protein TERM 1972 1720061 - 1720079 + r 83 -11.7 -3.75937 | opp_overlap 1720061 AGCCCCATAAAAAAA CGCCTCC ACATG GGAGGCG TTTGACTATCTATGT TERM 1973 1720079 - 1720061 - R 100 -11.7 -5.61596 | opp_overlap 1720061 AGCCCCATAAAAAAA CGCCTCC ACATG GGAGGCG TTTGACTATCTATGT fadE 1722556 - 1720100 - | acyl-CoA dehydrogenase gmhA 1722801 - 1723379 + | phosphoheptose isomerase TERM 1974 1723901 - 1723864 - g 91 -15.5 -3.86897 | TTGACGGGTTACAAA GGGTTGGCCACCGGTCG CCAT CGACCGGTGGGCGACAC CGACAGCGAACACGC AHA_1575 1723519 - 1724298 + | glutamine amidotransferases class-II TERM 1975 1724351 - 1724326 - f 100 -11.9 -5.76633 | opp_overlap 1724328, overlap 1724328 CCAGAGATAAAAAAA TACCAGGGTAG AATC CTACCCTGGTT CTTCGCAGCAGCCAT TERM 1976 1724328 - 1724349 + F 95 -14.5 -3.61398 | opp_overlap 1724326 1724328 AGAGATAAAAAAATA CCAGGGTAG AATC CTACCCTGG TTCTTCGCAGCAGCC TERM 1977 1724349 - 1724328 - f 100 -14.5 -4.51477 | opp_overlap 1724328, overlap 1724326 AGAGATAAAAAAATA CCAGGGTAG AATC CTACCCTGG TTCTTCGCAGCAGCC AHA_1576 1724620 - 1724955 + | Hpt domain-containing protein AHA_1577 1725918 - 1725007 - | hypothetical protein AHA_1578 1726032 - 1727216 + | hypothetical protein AHA_1579 1727358 - 1729331 + | sensor protein LuxQ TERM 1978 1729338 - 1729360 + T 72 -12.1 -2.77013 | opp_overlap 1729338, overlap 1729337 CGCAGCTAAAAAAAA TGGTCAACC TGGGT GGTTGACCA ATTCTTCAGCAAATA TERM 1979 1729360 - 1729338 - T 100 -12.1 -5.81412 | opp_overlap 1729338 1729337 CGCAGCTAAAAAAAA TGGTCAACC TGGGT GGTTGACCA ATTCTTCAGCAAATA TERM 1980 1729434 - 1729424 - T 70 -3.2 -4.80882 | ATTCTATATGAAAAA GTCG TGC CAAC TTTTCAGAACCAGTT AHA_1580 1730134 - 1729559 - | ATP-dependent protease La TERM 1981 1729945 - 1729977 + g 82 -15 -3.3676 | gap 1 CTTTGACCCGGGTGC CGACTGGCAGGATCC GCCC GGA-CTTGCCAGTCG TTGTCGCCTCTTCCA TERM 1982 1730223 - 1730194 - R 78 -13.7 -2.68942 | opp_overlap 1730201, overlap 1730201 ACTGTGCCAGAGAAT GAAAAAAGCCACC GGAA GGTGGCTTTTTGC TGGATGGGAGGGCGT TERM 1983 1730201 - 1730216 + r 100 -10.4 -4.7497 | opp_overlap 1730194 1730201 CAGAGAATGAAAAAA GCCACC GGAA GGTGGC TTTTTGCTGGATGGG TERM 1984 1730216 - 1730201 - R 100 -10.4 -5.35354 | opp_overlap 1730201, overlap 1730194 CAGAGAATGAAAAAA GCCACC GGAA GGTGGC TTTTTGCTGGATGGG AHA_1581 1730877 - 1730239 - | LuxR family DNA-binding response regulator narQ 1732589 - 1730877 - | nitrate/nitrite sensor protein NarQ TERM 1985 1732838 - 1732866 + G 72 -7.4 -4.24204 | CGTCGTTTCTACTAT TTGCGCCTGTCG ATCAC CGACGTGTGCAA TTTTCGCTGTACCTA moaA 1732763 - 1733791 + | molybdenum cofactor biosynthesis protein A napF 1734041 - 1734550 + | ferredoxin-type protein NapF napD 1734580 - 1734843 + | NapD protein TERM 1986 1735029 - 1735049 + G 73 -12.5 -3.25223 | opp_overlap 1735021, overlap 1735031 TTATGAAGGCCAACG CGGTGGCGG CAG CCGCTGCCG TTGCTGGTGTCAGTG napA 1734992 - 1737481 + | nitrate reductase AHA_1587 1737498 - 1738232 + | MauM/NapG ferredoxin-type protein AHA_1588 1738229 - 1739104 + | ferredoxin-type protein NapH napB 1739104 - 1739559 + | periplasmic nitrate reductase, diheme cytochrome c subunit AHA_1590 1739571 - 1740161 + | cytochrome c-type protein NapC TERM 1987 1740174 - 1740195 + F 100 -17.3 -3.36273 | TAAGCCCATCTGATG CAGGCCGGG TTCG CCCGGCCTG TTCATATTCCGCCCG moaB 1740424 - 1740930 + | molybdenum cofactor biosynthesis protein B TERM 1988 1741426 - 1741410 - g 80 -5 -4.82901 | opp_overlap 1741410 GCTGGTGGAGAAAAA GGGCGG CAAGT CCGGCC ATTTTCAGCTGGGTG moaC 1740940 - 1741464 + | molybdenum cofactor biosynthesis protein C TERM 1989 1741665 - 1741679 + G 83 -7.8 -4.57073 | ACGCCCCTTCATGAT GGCGAT GAG GTCGCC TTTTTCCCGCCGGTG moaD 1741461 - 1741706 + | molybdopterin synthase small subunit moaE 1741709 - 1742182 + | molybdopterin converting factor, subunit 2 modA 1742285 - 1743013 + | molybdate ABC transporter, periplasmic molybdate-binding protein TERM 1990 1743041 - 1743065 + F 83 -10 -4.13945 | gap 1 ACACCTACCTGATGA GT-GGCCGGCC CTCG GGTCGGCCCAC TTTTGCGATAAGGAT modB 1743237 - 1743917 + | molybdate ABC transporter, permease protein TERM 1991 1744135 - 1744157 + G 77 -14.8 -2.85069 | opp_overlap 1744116, overlap 1744132 1744130 GCTGAGCGATCTGCT GCCCGAGGCG CGC CGCATCGGGC TGGTGTTTCAGGATT modC 1743914 - 1744990 + | molybdate ABC transporter, ATP-binding protein AHA_1598 1745073 - 1745831 + | alpha/beta fold family hydrolase TERM 1992 1745865 - 1745883 + T 100 -12.4 -5.4505 | opp_overlap 1745865 TGACAGATAAAAAAA GCCGACCT CAT GGGTCGGC TTTTTTGTTGGCGAA TERM 1993 1745883 - 1745865 - T 100 -11.7 -5.76633 | opp_overlap 1745865 TGACAGATAAAAAAA GCCGACC TCATG GGTCGGC TTTTTTGTTGGCGAA moeB 1746672 - 1745917 - | molybdopterin synthase sulfurylase MoeB TERM 1994 1746227 - 1746247 + g 95 -10.3 -4.4078 | overlap 1746198 1746197 GCGCCGCTGACCAGC GGCACGCCG TGC TGGCGGGCC TTTTGGTTGAGCAGG AHA_1600 1747895 - 1746669 - | molybdopterin biosynthesis protein MoeA TERM 1995 1747470 - 1747486 + g 70 -12.3 -3.21276 | overlap 1747469 GCCCTCGCGGATGTC TTCGCCG CGG CGGCGAA TGTTCTGGCCGGGCA folE 1748201 - 1748857 + | GTP cyclohydrolase I TERM 1996 1749692 - 1749652 - g 74 -13.9 -2.83271 | opp_overlap 1749691, overlap 1749649 GGACTGGGACAAGTA CGTCGCCCTGCACCAGCGG GTG CGGCTGATGCAGGATGGCG GCCAGTTGGCGGAGG AHA_1602 1749269 - 1750924 + | methyl-accepting chemotaxis protein TERM 1997 1750980 - 1750949 - T 83 -10.8 -3.97674 | opp_overlap 1750954, overlap 1750954 CCACCAGGCAAATAA CAGAAGGCCCCGCC AATC AGCGGGGCCTTGTT GTTTCTGGCAGGTTT TERM 1998 1750954 - 1750975 + T 100 -14.4 -4.15703 | opp_overlap 1750949 1750954 AGGCAAATAACAGAA GGCCCCGC CAATCA GCGGGGCC TTGTTGTTTCTGGCA TERM 1999 1750975 - 1750954 - T 100 -15.1 -3.91066 | opp_overlap 1750954, overlap 1750949 AGGCAAATAACAGAA GGCCCCGCC AATC AGCGGGGCC TTGTTGTTTCTGGCA AHA_1603 1751171 - 1751058 - | hypothetical protein fhs 1752905 - 1751175 - | formate--tetrahydrofolate ligase TERM 2000 1751661 - 1751619 - G 90 -15.6 -3.73775 | gap 1, overlap 1751644 1751645 TCCACCCTGAGTAAA GGCGCTG-GAGATGGCGCT GCCACA AGCGCCGGCTCGCAGCGCC GCGCGGGCCAGCAGG AHA_1605 1752972 - 1753388 + | hypothetical protein AHA_1606 1754322 - 1753420 - | LysR family transcriptional regulator AHA_1607 1754433 - 1754993 + | small protease TERM 2001 1755023 - 1755042 + G 89 -15 -3.86202 | opp_overlap 1755019 1755018, overlap 1755010 CTGCTGCAAACCCTG GCGGCTCC TTTG GGAGCCGC TTTGCTGTCGTGGCG AHA_1608 1754993 - 1755730 + | hypothetical protein TERM 2002 1755845 - 1755887 + F 86 -12 -3.90744 | opp_overlap 1755854 1755856 1755859, overlap 1755854 GATTTTCAATTATCT GGACACACACAGAACCCGGT CTG ACCGGGTTCTGTTTGCCTGC TTGTTTGCGGCGCGC TERM 2003 1755854 - 1755878 + F 100 -18.7 -3.74658 | opp_overlap 1755854 1755856 1755859, overlap 1755845 TTATCTGGACACACA CAGAACCCGGT CTG ACCGGGTTCTG TTTGCCTGCTTGTTT TERM 2004 1755878 - 1755854 - f 100 -18.7 -2.99471 | opp_overlap 1755854 1755845, overlap 1755856 1755859 TTATCTGGACACACA CAGAACCCGGT CTG ACCGGGTTCTG TTTGCCTGCTTGTTT TERM 2005 1755876 - 1755856 - f 93 -15.5 -3.052 | opp_overlap 1755854 1755845, overlap 1755854 1755859 ATCTGGACACACACA GAACCCGGT CTG ACCGGGTTC TGTTTGCCTGCTTGT TERM 2006 1755873 - 1755859 - f 79 -11.4 -3.66896 | opp_overlap 1755854 1755845, overlap 1755856 1755854 TGGACACACACAGAA CCCGGT CTG ACCGGG TTCTGTTTGCCTGCT TERM 2007 1755914 - 1755943 + F 84 -5.7 -5.07107 | gap 1 GCGCTAAGGAGGCCA CAGTTGCGCAG-TC AAG GATCTGAGCATCTG TTTTTTCGCCATTTC TERM 2008 1757001 - 1757043 + G 100 -11.2 -5.06414 | overlap 1757003 TGCGCACCATTGCCC GCCACTGGCTGGCCGACTTC CAC GGGGTCGCCCAGTGAGTGTC TTTTTCTTAGCCGCC TERM 2009 1757003 - 1757041 + G 86 -12.4 -4.16307 | overlap 1757001 CGCACCATTGCCCGC CACTGGCTGGCCGACTTC CAC GGGGTCGCCCAGTGAGTG TCTTTTTCTTAGCCG AHA_1609 1755917 - 1757038 + | S-adenosyl-L-homocysteine hydrolase NAD binding domain-containing protein AHA_1610 1757076 - 1757387 + | SelT/selW/selH domain-containing protein TERM 2010 1757405 - 1757436 + T 84 -13 -3.35438 | opp_overlap 1757408, overlap 1757408 1757410 CACAGCATCAATGAC AAAGAGAGGGAGGC ACAG GCCTCCCTCTCTCG TTGTGGCGTCTGGTC TERM 2011 1757408 - 1757433 + T 100 -19.1 -2.84298 | opp_overlap 1757408, overlap 1757405 1757410 AGCATCAATGACAAA GAGAGGGAGGC ACAG GCCTCCCTCTC TCGTTGTGGCGTCTG TERM 2012 1757433 - 1757408 - T 100 -19.1 -4.08546 | opp_overlap 1757408 1757405 1757410 AGCATCAATGACAAA GAGAGGGAGGC ACAG GCCTCCCTCTC TCGTTGTGGCGTCTG TERM 2013 1757410 - 1757431 + T 87 -15.9 -2.9675 | opp_overlap 1757408, overlap 1757408 1757405 CATCAATGACAAAGA GAGGGAGGC ACAG GCCTCCCTC TCTCGTTGTGGCGTC AHA_1611 1759174 - 1757450 - | phosphate acyltransferase family protein TERM 2014 1757805 - 1757781 - G 70 -7.9 -4.07687 | overlap 1757795 AGCTCGGGGGCAAAA TGCTGGCGA TAGAAGC TCACCAGCA GATCCTTGGCCGCCG TERM 2015 1759287 - 1759260 - R 100 -20.6 -3.60296 | opp_overlap 1759260 CAGTTTGATGGCAAA GAGGGGAGCCGG TTAA CCGGCCCCCCTC TTGTTGTCATGGCGG TERM 2016 1759260 - 1759287 + r 100 -18.4 -3.84406 | opp_overlap 1759260 CAGTTTGATGGCAAA GAGGGGAGCCGG TTAA CCGGCCCCCCTC TTGTTGTCATGGCGG pepT 1760540 - 1759317 - | peptidase T TERM 2017 1760077 - 1760041 - G 76 -9.3 -4.07568 | TCGTCCGGGGTAAAA CCGACCCAGACATCGCC ACG GGGGATCTCGGGGTGGG CCAGCAGGTGGTCGA TERM 2018 1760169 - 1760181 + g 76 -5.5 -4.56597 | opp_overlap 1760167, overlap 1760168 GGTGGTGATGAGATC CTGCC CCA GGTAG TTTTTCAGGAAGCGG TERM 2019 1760599 - 1760612 + H 71 -4.5 -4.61527 | overlap 1760600 TGGCGGCGCGGCTTT TTGCG TCAG CGCAG TTTTTGCCGCATTTT TERM 2020 1761587 - 1761573 - H 75 -12.8 -2.61274 | opp_overlap 1761573 1761571, overlap 1761572 TTGAGGGTAACGAAG GCGGCC ACC GGCCGC TCATTTGCGAGGCAT TERM 2021 1761573 - 1761587 + H 79 -12.8 -2.90615 | opp_overlap 1761572 1761573, overlap 1761571 TTGAGGGTAACGAAG GCGGCC ACC GGCCGC TCATTTGCGAGGCAT speA 1761608 - 1763509 + | arginine decarboxylase TERM 2022 1763581 - 1763564 - f 100 -14.1 -5.60993 | opp_overlap 1763564 GCGGGCATAAAAAAA CGGCGCC TGCG GGCGCCG TTTTTGTTGCGCATG TERM 2023 1763564 - 1763581 + F 100 -14.1 -5.07486 | opp_overlap 1763564 GCGGGCATAAAAAAA CGGCGCC TGCG GGCGCCG TTTTTGTTGCGCATG AHA_1614 1763792 - 1763980 + | hypothetical protein TERM 2024 1763997 - 1764036 + T 80 -9.2 -4.09822 | gap 1, overlap 1764000 1764001 CTACATTGCCAGCAT TG-CCTGCGGCCATCGGCA GCT TGCCGCTGGCCGCGCTTCA TTTATCTACTCAATT TERM 2025 1764000 - 1764032 + T 100 -15.5 -3.66365 | overlap 1763997 1764001 CATTGCCAGCATTGC CTGCGGCCATCGGCA GCT TGCCGCTGGCCGCGC TTCATTTATCTACTC TERM 2026 1764001 - 1764031 + T 100 -19 -2.79096 | overlap 1764000 1763997 ATTGCCAGCATTGCC TGCGGCCATCGGCA GCT TGCCGCTGGCCGCG CTTCATTTATCTACT AHA_1615 1764446 - 1764129 - | hypothetical protein TERM 2027 1764597 - 1764576 - R 100 -7.2 -5.77853 | overlap 1764577 AATTGGCAAAAAAAA GCCAGCCC GGCAAG GGGCTGGG GTGAGTGACGGGGAC TERM 2028 1764596 - 1764577 - R 83 -10.7 -4.05085 | overlap 1764576 ATTGGCAAAAAAAAG CCAGCCC GGCAAG GGGCTGG GGTGAGTGACGGGGA AHA_1616 1766773 - 1764617 - | methyl-accepting chemotaxis protein TERM 2029 1764883 - 1764936 + g 73 -11 -3.58343 | gap 3 CCAGACCGACCCCCT CCTGCGCCTCGCGGCT-GG-CGGCG GACATGG CGCTGACCGAGGCGCG-GGCGCCGG TTTGCAGCTGCTCGA TERM 2030 1766788 - 1766766 - G 100 -20.6 -4.84017 | AATGGGTCAGAAAAA CGGGCCACCC TCA GGGTGGCCCG TTGCCGATGGGAGAA AHA_1617 1768171 - 1766813 - | inner membrane transport protein YhaO AHA_1618 1768357 - 1768740 + | endoribonuclease L-PSP, putative AHA_1619 1768763 - 1770052 + | hypothetical protein TERM 2031 1770064 - 1770092 + F 71 -10.3 -3.26262 | gap 1, overlap 1770081 CTGAGTGTCCCTGTC GGCTGCC-ACCC TTGCCC GGGTCGGCGGCC CTTTTATAAGGTTTC TERM 2032 1770081 - 1770093 + F 75 -6.9 -4.44974 | overlap 1770064 1770092 CTGCCACCCTTGCCC GGGTC GGC GGCCC TTTTATAAGGTTTCA AHA_1620 1770111 - 1770764 + | MukF protein TERM 2033 1770781 - 1770758 - f 73 -8.8 -3.7732 | gap 1, overlap 1770759 GCGGGAGATCAAGAA GGGCTGAGCGC ATG GCGC-CAGCCA GCATTAACGGGTCAG TERM 2034 1770780 - 1770759 - f 75 -12.3 -2.86071 | gap 1, overlap 1770758 CGGGAGATCAAGAAG GGCTGAGCGC ATG GCGC-CAGCC AGCATTAACGGGTCA TERM 2035 1770789 - 1770806 + F 100 -11.3 -5.55855 | opp_overlap 1770789 GCCAGCCAGCATTAA CGGGTCA GCAT TGACCCG TTTTGTTTTTTTACG TERM 2036 1770806 - 1770789 - f 74 -11.3 -3.22298 | opp_overlap 1770789 GCCAGCCAGCATTAA CGGGTCA GCAT TGACCCG TTTTGTTTTTTTACG AHA_1621 1770909 - 1771496 + | fructose-2;6-bisphosphatase TERM 2037 1771509 - 1771529 + T 100 -18.3 -5.60993 | opp_overlap 1771509 TGACCCCGACGAAAA CGGCTCGCC ATT GGCGAGCCG TTTTTTTATGAGCGC TERM 2038 1771529 - 1771509 - T 100 -18.3 -4.26076 | opp_overlap 1771509 TGACCCCGACGAAAA CGGCTCGCC ATT GGCGAGCCG TTTTTTTATGAGCGC AHA_1622 1772295 - 1771555 - | 5-methylcytosine-specific restriction protein A TERM 2039 1771989 - 1772002 + g 72 -4.5 -4.58283 | overlap 1771990 CTATGATGGGGGCAT TGTGG GGGC CCACG TTTTTAGCCGGCTTG AHA_1623 1772489 - 1772956 + | hypothetical protein AHA_1624 1773110 - 1773478 + | lactoylglutathione lyase family protein AHA_1625 1775185 - 1773602 - | hypothetical protein TERM 2040 1775225 - 1775211 - R 75 -7 -4.42386 | overlap 1775213 1775214 TTGGCACTGATAAAA GAGGGG CGG CCCCGC GTCCACGGCGGCCGT TERM 2041 1775223 - 1775213 - R 71 -8.2 -3.82117 | overlap 1775211 1775214 GGCACTGATAAAAGA GGGG CGG CCCC GCGTCCACGGCGGCC TERM 2042 1775347 - 1775320 - R 100 -17.1 -3.74693 | opp_overlap 1775322 1775324 GTTCATCCGAGCAAA CAGAGGGCAGC TCCGGG GCTGCCCTCTG TGGTAATGCTGTCCG TERM 2043 1775322 - 1775345 + r 83 -14.6 -2.84192 | opp_overlap 1775320, overlap 1775324 TCATCCGAGCAAACA GAGGGCAGCT CCGG GGCTGCCCTC TGTGGTAATGCTGTC TERM 2044 1775324 - 1775343 + r 71 -11.4 -2.96692 | opp_overlap 1775320, overlap 1775322 ATCCGAGCAAACAGA GGGCAGCT CCGG GGCTGCCC TCTGTGGTAATGCTG AHA_1626 1776729 - 1775383 - | glutamate dehydrogenase TERM 2045 1777233 - 1777246 + H 84 -5.9 -5.03314 | GCTTTTTGCCGGACA GGTCG GTAG CGGCC TTTTTTGAAGATGGA AHA_1627 1777267 - 1777359 + | hypothetical protein AHA_1628 1777349 - 1778383 + | 23S rRNA pseudouridine synthase F TERM 2046 1778390 - 1778374 - T 73 -9.3 -3.78934 | TGGGCGGCAGAAGAA GGGGCGC TAA GCCCCCC TCACTCCCCGCGTTG TERM 2047 1778417 - 1778435 + T 100 -16 -5.45802 | opp_overlap 1778417 GTTGACATTAAAAAA CACCGGCC ACA GGCCGGTG TTTTTGTTTTGGCGA TERM 2048 1778435 - 1778417 - T 100 -16 -5.21709 | opp_overlap 1778417 GTTGACATTAAAAAA CACCGGCC ACA GGCCGGTG TTTTTGTTTTGGCGA AHA_1629 1779691 - 1778456 - | cyanate transport protein CynX AHA_1630 1780187 - 1779684 - | cytidine/deoxycytidylate deaminase, zinc-binding region AHA_1631 1780298 - 1781146 + | LysR family transcriptional regulator AHA_1632 1782368 - 1781169 - | MFS family transporter TERM 2049 1781725 - 1781715 - G 90 -8.2 -4.82901 | overlap 1781716 GGCCGGCCAGAAAAA GCCG GGG CGGC GCAGCAGGCTGGCGT TERM 2050 1781774 - 1781716 - G 71 -11 -3.49419 | gap 4, overlap 1781715 GCCGGCCAGAAAAAG CCGG-GGCGGCGCAGCAGGCTGGCGTAACG GGC CCACATGCC-GCC-GCT-CGCCGCCGCCGG GTTGGGCCCCAGCAG TERM 2051 1782416 - 1782374 - R 73 -9.2 -3.8211 | gap 1 GGTTATCCATAACAA CTCTCGGGCAGTA-AGGGA GCCATA TCCTTGCACTGCCCGAGCG CCGAGTCAGCCCCTC AHA_1633 1782947 - 1782480 - | transcriptional regulatory protein AHA_1634 1783143 - 1782988 - | hypothetical protein AHA_1635 1783695 - 1783225 - | cytosolic long-chain acyl-CoA thioester hydrolase family protein AHA_1636 1784027 - 1783716 - | hypothetical protein TERM 2052 1784637 - 1784580 - g 75 -13.4 -3.09327 | overlap 1784556 GTACCTGACCGAACA GGGGCAGAGCGATGCG-GCCCGCTGGAT CGAT ACCGAGCTGGCACGC-CCGCTCGACCCC CACGCCCTGGCGCGA AHA_1637 1784170 - 1784829 + | inner membrane protein YebE TERM 2053 1784853 - 1784881 + F 86 -15.3 -2.95476 | overlap 1784859 AGGGACAAGGATTGT CGATGAGGCCCCG TTA CGGGGCCTTGTTG TGTCTGGTCACTAGT TERM 2054 1784859 - 1784875 + F 100 -15.1 -3.94067 | overlap 1784853 AAGGATTGTCGATGA GGCCCCG TTA CGGGGCC TTGTTGTGTCTGGTC TERM 2055 1785170 - 1785183 + G 74 -5.9 -4.44211 | overlap 1785161 TGCTGGCGGCCATCG CTGCC GAAG GGCGG TTGTTTTGTGTTGCC AHA_1638 1784965 - 1785483 + | putative acetyltransferase TERM 2056 1785517 - 1785533 + T 88 -10.1 -4.49756 | opp_overlap 1785517 1785515, overlap 1785530 ATTTTGCAAGGAACA GGCCTCA TCA TGGGGCC TTTTGGTCTTTGGCG AHA_1639 1786963 - 1785524 - | GntR family transcriptional regulator TERM 2057 1786487 - 1786520 + g 90 -19.5 -2.70932 | CGCCAGCCCCTCGCC GGCGTAGCGCTGGGC GATG GCCCGGCGCAGCGCC TCGTTGCCGGGGGGC AHA_1640 1787084 - 1788655 + | cytochrome D ubiquinol oxidase subunit I TERM 2058 1789055 - 1789068 + G 72 -2.3 -4.72272 | CGACCCTGGTGTTTG GCGCA ACCT TGGGC TTTTTGCTGCAGGGG cydB-1 1788655 - 1789782 + | cytochrome D ubiquinol oxidase, subunit II AHA_1642 1789810 - 1789923 + | cyd operon protein YbgT TERM 2059 1789959 - 1789940 - T 100 -13.6 -4.28548 | opp_overlap 1789940 ACGCAGCCATGAAAA GGCCGACA CAGG TGTCGGCC TTTTTGCATCCTGCT TERM 2060 1789940 - 1789959 + T 100 -13.6 -4.68994 | opp_overlap 1789940 ACGCAGCCATGAAAA GGCCGACA CAGG TGTCGGCC TTTTTGCATCCTGCT AHA_1643 1791158 - 1789986 - | major facilitator transporter TERM 2061 1790549 - 1790559 + g 72 -2.4 -4.72272 | opp_overlap 1790528 1790549 TCTTGGCGTAGACCA GCAG CAG CGGC TTTTTGGTGAGCACC TERM 2062 1791357 - 1791335 - R 100 -19.2 -5.81622 | ACAAAACCAAAAAAA GCGGGAGGCA CAG TGCCTCCCGC TAGGGGTTGGAGAAG dkgB 1792336 - 1791533 - | 2,5-diketo-D-gluconate reductase B AHA_1645 1792680 - 1792384 - | antibiotic biosynthesis monooxygenase family protein TERM 2063 1792445 - 1792429 - G 79 -13.7 -3.53012 | GGTGCTTCCGGCAAA CCAGGGC TCT GCCCTGG CGACAAATTCGGTAA TERM 2064 1792855 - 1792829 - R 91 -12.3 -4.22214 | gap 1, overlap 1792832 AGTGAGGTAAAAGAA GCA-GGGAGCGC CGGG GCGCCCCCTTGC CATCAGGCATTGGCC TERM 2065 1792851 - 1792832 - R 81 -12.8 -3.1165 | overlap 1792829 GAGGTAAAAGAAGCA GGGAGCGC CGGG GCGCCCCC TTGCCATCAGGCATT AHA_1646 1793220 - 1792858 - | glyoxalase/dioxygenase superfamily protein TERM 2066 1794365 - 1794377 + G 78 -3.3 -5.00616 | overlap 1794329 1794357 1794366 ATCTGTTGAGCGGGC ACGAG CTG CTCGG TTTTTTGCACCCCGA AHA_1647 1793800 - 1794702 + | putative HTH-type transcriptional regulator YafC TERM 2067 1794803 - 1794836 + T 91 -9.5 -4.62069 | opp_overlap 1794806, overlap 1794804 1794805 CGGGGCGGCGCTAAA AAAGAGAGGCCGACA TTGC TGTCGGCCTCTCACG TTTTTCAGCTCAAGG TERM 2068 1794804 - 1794835 + T 84 -13 -3.3692 | opp_overlap 1794806, overlap 1794803 1794805 GGGGCGGCGCTAAAA AAGAGAGGCCGACA TTGC TGTCGGCCTCTCAC GTTTTTCAGCTCAAG TERM 2069 1794805 - 1794834 + T 89 -16.5 -2.61831 | opp_overlap 1794806, overlap 1794804 1794803 GGGCGGCGCTAAAAA AGAGAGGCCGACA TTGC TGTCGGCCTCTCA CGTTTTTCAGCTCAA TERM 2070 1794833 - 1794806 - T 100 -20 -5.00616 | opp_overlap 1794805 1794804 1794803 GGCGGCGCTAAAAAA GAGAGGCCGACA TTGC TGTCGGCCTCTC ACGTTTTTCAGCTCA glpK 1796371 - 1794869 - | glycerol kinase glpF 1797274 - 1796426 - | glycerol uptake facilitator protein glpT 1797762 - 1799117 + | sn-glycerol-3-phosphate transporter TERM 2071 1799169 - 1799189 + F 100 -11.1 -5.23316 | AGGTAAACTCCCCAA GGCCCCG CATCTGC CGGGGCC TTTTTTCGTCTCATC glpR 1799219 - 1799977 + | glycerol-3-phosphate regulon repressor TERM 2072 1801480 - 1801501 + G 73 -10.8 -3.61371 | CGAGTTCGACTGCTC GGTGCGCG AGCTGG CGCGCGCC TTTGCGCTGGAATTT glpD 1800299 - 1801786 + | glycerol-3-phosphate dehydrogenase glpQ 1801889 - 1802968 + | glycerophosphodiester phosphodiesterase TERM 2073 1803014 - 1802996 - f 83 -13.1 -3.19018 | opp_overlap 1802996 AACACGGGAATGCAA GCGGGGC CAGGT GCCCCGC TTTTTTATGCCTGTT TERM 2074 1802996 - 1803014 + F 100 -13.1 -5.30686 | opp_overlap 1802996 AACACGGGAATGCAA GCGGGGC CAGGT GCCCCGC TTTTTTATGCCTGTT TERM 2075 1803050 - 1803067 + F 72 -4.1 -4.8048 | opp_overlap 1803050 GAGAAAACAGAAGAG CGTAATC ATAT GTTTACG TTTTTGGTGTGCGGA AHA_1654 1803287 - 1804360 + | phospho-2-dehydro-3-deoxyheptonate aldolase TERM 2076 1804426 - 1804394 - f 72 -11.9 -2.8082 | opp_overlap 1804394, overlap 1804393 1804390 CACTGATTGAACAAG CGAGGTGTCATCGGC CGA GGCGGTGGCACCTCG TTGCCTCTTGAATCA TERM 2077 1804394 - 1804426 + F 100 -16.3 -3.19522 | opp_overlap 1804393 1804390 1804394 CACTGATTGAACAAG CGAGGTGTCATCGGC CGA GGCGGTGGCACCTCG TTGCCTCTTGAATCA tyrA 1804479 - 1805618 + | bifunctional chorismate mutase/prephenate dehydrogenase TERM 2078 1805664 - 1805625 - T 100 -22.4 -3.7941 | opp_overlap 1805631 1805637, overlap 1805626 1805631 1805637 CACGGCTGAGAATAA CCAAAAGCAAAAGGGGCC TGTC GGCCCCTTTTGCTTTTGT ACTCCCGCTTGTGCG TERM 2079 1805663 - 1805626 - T 100 -25.9 -2.87325 | opp_overlap 1805631 1805637, overlap 1805625 1805631 1805637 ACGGCTGAGAATAAC CAAAAGCAAAAGGGGCC TGTC GGCCCCTTTTGCTTTTG TACTCCCGCTTGTGC TERM 2080 1805631 - 1805658 + T 100 -20 -4.4648 | opp_overlap 1805631 1805626 1805625 1805637, overlap 1805637 TGAGAATAACCAAAA GCAAAAGGGGCC TGTC GGCCCCTTTTGC TTTTGTACTCCCGCT TERM 2081 1805658 - 1805631 - T 100 -20 -4.59414 | opp_overlap 1805631 1805637, overlap 1805626 1805625 1805637 TGAGAATAACCAAAA GCAAAAGGGGCC TGTC GGCCCCTTTTGC TTTTGTACTCCCGCT TERM 2082 1805637 - 1805652 + T 100 -11.8 -4.74012 | opp_overlap 1805637 1805631 1805626 1805625, overlap 1805631 TAACCAAAAGCAAAA GGGGCC TGTC GGCCCC TTTTGCTTTTGTACT TERM 2083 1805652 - 1805637 - T 100 -11.8 -4.72729 | opp_overlap 1805631 1805637, overlap 1805631 1805626 1805625 TAACCAAAAGCAAAA GGGGCC TGTC GGCCCC TTTTGCTTTTGTACT AHA_1656 1806566 - 1805691 - | LysR family transcriptional regulator AHA_1657 1807081 - 1806566 - | hypothetical protein TERM 2084 1807155 - 1807186 + r 70 -8.8 -3.71284 | opp_overlap 1807160 1807164, overlap 1807160 1807164 AGACGACATTTGGCT AAAAATAAAGCGCC ATTC GGCGCTCTATTTTG TTGTGTTCATGAACC TERM 2085 1807181 - 1807160 - R 95 -10.9 -4.57837 | opp_overlap 1807155 1807160 1807164, overlap 1807164 ACATTTGGCTAAAAA TAAAGCGCC ATTC GGCGCTCTA TTTTGTTGTGTTCAT TERM 2086 1807160 - 1807181 + r 100 -8.7 -4.91285 | opp_overlap 1807160 1807164, overlap 1807155 1807164 ACATTTGGCTAAAAA TAAAGCGCC ATTC GGCGCTCTA TTTTGTTGTGTTCAT TERM 2087 1807164 - 1807177 + r 71 -9.5 -3.59445 | opp_overlap 1807164 1807160, overlap 1807160 1807155 TTGGCTAAAAATAAA GCGCC ATTC GGCGC TCTATTTTGTTGTGT TERM 2088 1807177 - 1807164 - R 100 -9.5 -4.85782 | opp_overlap 1807160 1807155 1807164, overlap 1807160 TTGGCTAAAAATAAA GCGCC ATTC GGCGC TCTATTTTGTTGTGT AHA_1658 1807821 - 1807231 - | ecotin TERM 2089 1807810 - 1807793 - G 78 -7 -4.65895 | TCTGCTACGTAAAAA CTGCGT AAAATG ACGCAG ATCCGGCACACAATG TERM 2090 1807940 - 1807888 - R 74 -10.6 -3.53091 | gap 2, opp_overlap 1807889, overlap 1807889 AGTCCGGGTGCCAAA TGCGGGTGGCCAGTCGGGATCCTG TGCTCAT CGGGATCCC--CTGGCCACCCGGC TTCATCAGCGCACCA TERM 2091 1807939 - 1807889 - R 83 -14.1 -2.71712 | gap 2, opp_overlap 1807889, overlap 1807888 GTCCGGGTGCCAAAT GCGGGTGGCCAGTCGGGATCCTG TGCTCAT CGGGATCCC--CTGGCCACCCGG CTTCATCAGCGCACC TERM 2092 1807889 - 1807940 + r 93 -16.1 -3.14132 | gap 3, opp_overlap 1807889 1807888 GTCCGGGTGCCAAAT GC-GGGTGGCCAGTCGGGATCCTG TGCTCAT CGGGATCCC--CTGGCCACCCGGC TTCATCAGCGCACCA AHA_1659 1808502 - 1807945 - | hypothetical protein AHA_1660 1809872 - 1808499 - | hypothetical protein TERM 2093 1809888 - 1809907 + r 76 -9.2 -3.93398 | overlap 1809890 CTCTTGTCCTTGGGC AAGGGGGC CTTG GCCCCCTC TTCTTATATATGGAT TERM 2094 1809890 - 1809905 + r 81 -11.8 -3.55061 | overlap 1809888 CTTGTCCTTGGGCAA GGGGGC CTTG GCCCCC TCTTCTTATATATGG AHA_1661 1812346 - 1809932 - | proprotein convertase P-domain-containing protein TERM 2095 1812033 - 1812065 + g 76 -12.8 -3.4252 | gap 2, overlap 1812020 GTGCCAGCGGCGTCG CAGCCGGGTTCGCTGC TCT GCAGCGG-CC-GGCTG TTGTGATAGATGCGC AHA_1662 1814457 - 1812379 - | protease II AHA_1663 1816619 - 1814457 - | hemin receptor TERM 2096 1816690 - 1816704 + r 95 -5.8 -5.3658 | opp_overlap 1816687 1816686 1816689, overlap 1816687 AGTCAGATCAACGAT TGATAA TCA TTATCA TTTTGTTTTTATGAT TERM 2097 1816901 - 1816885 - R 100 -9.4 -5.4505 | opp_overlap 1816885 GGCTGCAATAAAAAA CCCGCT GCAGG AGCGGG TTTTCAAGGGGCATG TERM 2098 1816885 - 1816901 + r 80 -9.4 -4.07885 | opp_overlap 1816885 GGCTGCAATAAAAAA CCCGCT GCAGG AGCGGG TTTTCAAGGGGCATG AHA_1664 1818776 - 1816926 - | putative sulfatase TERM 2099 1818842 - 1818870 + rH 70 -3 -4.68593 | opp_overlap 1818819 1818817, overlap 1818844 1818847 GCATCGTGGCGATGA TCCACCGAGGCG GTGAG CGCCTGGATGTA TTTTTCGGTGATCGC AHA_1665 1819047 - 1818820 - | hypothetical protein AHA_1666 1819040 - 1820170 + | nucleoid-associated protein NdpA TERM 2100 1820200 - 1820223 + FH 100 -12.5 -5.27335 | opp_overlap 1820200 CAGTTTTGGCAAAAA GACACCGCA CTTCGC TGCGGTGTC TTTTTATTTAACGGG TERM 2101 1820223 - 1820200 - fH 100 -12.5 -4.57073 | opp_overlap 1820200 CAGTTTTGGCAAAAA GACACCGCA CTTCGC TGCGGTGTC TTTTTATTTAACGGG TERM 2102 1820298 - 1820331 + FH 100 -15.6 -3.73271 | opp_overlap 1820293 1820303, overlap 1820294 1820303 ACAGAATAATCCCCG TGAAAGGGTTTTCA GTGAGG TGAAAACCCTTTCA TTCATGTTTTTTTAT TERM 2103 1820303 - 1820326 + FH 80 -9.7 -4.02979 | opp_overlap 1820293 1820303, overlap 1820298 1820294 ATAATCCCCGTGAAA GGGTTTTCA GTGAGG TGAAAACCC TTTCATTCATGTTTT TERM 2104 1820326 - 1820303 - fH 71 -9.7 -3.54638 | opp_overlap 1820303 1820298 1820294, overlap 1820293 ATAATCCCCGTGAAA GGGTTTTCA GTGAGG TGAAAACCC TTTCATTCATGTTTT malE 1820566 - 1821747 + | maltose ABC transporter periplasmic protein TERM 2105 1821759 - 1821783 + F 71 -11.3 -2.91239 | GTAAGCACGCACTAC CCGGGAGGCCG CAA CGGCCTCCCAC TCTCTCAAATCTCTC malF 1821823 - 1823475 + | maltose transporter membrane protein malG 1823488 - 1824378 + | maltose transporter permease AHA_1670 1824448 - 1825584 + | maltose/maltodextrin import ATP-binding protein MalK TERM 2106 1825634 - 1825651 + T 100 -12.7 -5.10461 | ATTCAATGCCTTTTT GCCGGTC GCAA GACCGGC TTTTTATTGCCTGCC AHA_1671 1826515 - 1825700 - | polyphosphate kinase 2 AHA_1672 1826628 - 1827428 + | alpha/beta fold family hydrolase TERM 2107 1827459 - 1827485 + T 100 -13.8 -4.31293 | opp_overlap 1827464, overlap 1827464 CTGACGATGATCGTG AAAAAGGGAGCC GAG GGCTCCCTTTTG TTTGTTCGTATCTCA TERM 2108 1827464 - 1827480 + T 100 -13.7 -5.12172 | opp_overlap 1827464, overlap 1827459 GATGATCGTGAAAAA GGGAGCC GAG GGCTCCC TTTTGTTTGTTCGTA TERM 2109 1827480 - 1827464 - T 100 -13.7 -4.60487 | opp_overlap 1827464 1827459 GATGATCGTGAAAAA GGGAGCC GAG GGCTCCC TTTTGTTTGTTCGTA mipA 1828320 - 1827514 - | MltA-interacting protein MipA TERM 2110 1828270 - 1828298 + g 77 -14.6 -2.90496 | overlap 1828268 1828272 GGGCATGGCGGCAGC GAGGAGCAGGGC CGTCA GCCCTGCTGCTC TGATTTGACGCAAAA AHA_1674 1829426 - 1828356 - | PerM family permease AHA_1675 1829684 - 1829442 - | hypothetical protein AHA_1676 1829864 - 1831267 + | zinc metalloprotease TERM 2111 1831289 - 1831320 + T 100 -24.6 -4.46212 | opp_overlap 1831295 AGCGGCTCTCATTCA CGACAAGGGCGCAC CTCG GTGCGCCCTTGTCG TTTTATGATGACGAA TERM 2112 1831314 - 1831295 - T 95 -15 -3.4252 | opp_overlap 1831289 TCTCATTCACGACAA GGGCGCAC CTCG GTGCGCCC TTGTCGTTTTATGAT TERM 2113 1831351 - 1831364 + T 87 -8.1 -4.57341 | opp_overlap 1831341 GTGAATGGCGGGAAC GCCAG CCGG CTGGC TTTTTCGCAAGGGTT AHA_1677 1831869 - 1831387 - | thioredoxin arsC-1 1831930 - 1832280 + | arsenate reductase AHA_1679 1832277 - 1832672 + | hypothetical protein TERM 2114 1832704 - 1832720 + F 100 -9.4 -5.65177 | opp_overlap 1832704 CCTGCTCTGTGCAAA CCGGAC CTTGA GTCCGG TTTTTTTATGGATGT TERM 2115 1832720 - 1832704 - f 71 -10.1 -3.53012 | opp_overlap 1832704 CCTGCTCTGTGCAAA CCGGACC TTG AGTCCGG TTTTTTTATGGATGT TERM 2116 1833395 - 1833405 + G 71 -8.2 -3.85698 | GCCACCGTCAGCGAG GCGG CCG CCGC TTTGTCGAAGGACGA AHA_1680 1832963 - 1834033 + | penicillin acylase TERM 2117 1834065 - 1834050 - T 78 -11.8 -3.29461 | opp_overlap 1834050 GAAGCGTTGGTAGAA GGCCCC TCGC GGGGCC TTTTTTATGGCCGCA TERM 2118 1834050 - 1834065 + T 100 -11.8 -5.24129 | opp_overlap 1834050 GAAGCGTTGGTAGAA GGCCCC TCGC GGGGCC TTTTTTATGGCCGCA AHA_1681 1834690 - 1834070 - | hypothetical protein TERM 2119 1834256 - 1834276 + g 82 -11.1 -3.99324 | GCGGCCGATGCCGTT GAGGGCCTG CGC CAGCCCCTC TTTGTGCTGATAGGA iadA 1834867 - 1835997 + | isoaspartyl dipeptidase TERM 2120 1836048 - 1836079 + T 100 -24.6 -3.63694 | opp_overlap 1836048 1836054 TTCCCCTCTTTTAAA CGACAAGCCCGGCA GCAG TGCCGGGCTTGTCG TTGTTGGCGATGGGT TERM 2121 1836079 - 1836048 - T 100 -24.6 -3.53012 | opp_overlap 1836048, overlap 1836054 TTCCCCTCTTTTAAA CGACAAGCCCGGCA GCAG TGCCGGGCTTGTCG TTGTTGGCGATGGGT TERM 2122 1836073 - 1836054 - T 95 -15 -3.60151 | opp_overlap 1836048, overlap 1836048 TCTTTTAAACGACAA GCCCGGCA GCAG TGCCGGGC TTGTCGTTGTTGGCG AHA_1683 1837010 - 1836108 - | hypothetical protein TERM 2123 1837053 - 1837041 - H 76 -2.7 -4.98758 | AAAAACTGACAAAAA TGACA CCT TATCA TCACTTATTGGGCCT TERM 2124 1837094 - 1837107 + H 100 -8.1 -5.29782 | TTTGTGTGTTTGCCT GCTCC ATCC GGAGC TTTTTTATCAATATG TERM 2125 1837188 - 1837204 + H 71 -4.3 -4.57073 | opp_overlap 1837188, overlap 1837189 TGGTGCAGCCAGAAC GGGGTCT GAC AGGCCCA TTTTTCAACAGGATG AHA_1684 1837544 - 1838314 + | histidine ABC transporter, ATP-binding protein AHA_1685 1838380 - 1839153 + | arginine and ornithine binding protein TERM 2126 1839234 - 1839272 + F 80 -11.7 -3.35813 | gap 1, opp_overlap 1839260, overlap 1839232 1839235 CCTAGTCTGTAGTCA TCGGGCCCGTTGTCTCTC GCAA GGGAG-CGATGGGCCCGC TTAGTTGCAATGGAG TERM 2127 1839235 - 1839271 + F 83 -15.2 -2.61274 | gap 1, opp_overlap 1839260, overlap 1839232 1839234 CTAGTCTGTAGTCAT CGGGCCCGTTGTCTCTC GCAA GGGAG-CGATGGGCCCG CTTAGTTGCAATGGA AHA_1686 1839358 - 1840098 + | histidine ABC transporter, permease protein HisQ AHA_1687 1840102 - 1840794 + | histidine ABC transporter, permease protein HisM TERM 2128 1840824 - 1840809 - T 100 -11.8 -5.63504 | opp_overlap 1840809 AACGCCATAAAAAAA GCCCGC AATT GCGGGC TTTTTTGTCGCTGCG TERM 2129 1840809 - 1840824 + T 100 -11.8 -5.28176 | opp_overlap 1840809 AACGCCATAAAAAAA GCCCGC AATT GCGGGC TTTTTTGTCGCTGCG AHA_1688 1841487 - 1840846 - | hypothetical protein TERM 2130 1841566 - 1841540 - R 71 -10.1 -3.60475 | AAGCCCGATGTGAAA GGGGCCGGC GTTTTCCCG GCCAGCCCC TGAGCTATCAGTATT pflA 1842392 - 1841574 - | pyruvate formate lyase-activating enzyme 1 AHA_1690 1845436 - 1842458 - | PAS/GGDEF domain-containing protein TERM 2131 1844715 - 1844731 + g 72 -2.2 -4.77036 | TTGAGGTATTCGAGG CTCAGC ACGCC GATGAG TTTTTCCTGCTCCAG AHA_1691 1845532 - 1847220 + | NADH dehydrogenase TERM 2132 1850222 - 1850212 - g 77 -2.4 -5.00616 | overlap 1850213 GCGCCGCTGAAAAAA GGCG GCG CGCT GGAGAGTCGGGTCGA TERM 2133 1850605 - 1850571 - g 74 -4.9 -4.56597 | gap 1, overlap 1850572 CCTTTCTCTTAAAAA TGGCGAGGAGCAGTGG CTGA CC-CTGCCGCTCACCG TGACCGGGGCGAGCG AHA_1692 1847308 - 1852275 + | alpha-2-macroglobulin, N-terminal:Alpha-2-macroglobulin, N-terminal TERM 2134 1852323 - 1852344 + G 91 -15.9 -3.86346 | opp_overlap 1852312 GCAACGTTCCTTCCA GTGAGCGGG TTCG CCCGCTCAC TTTCTGGCAGCGTGG pbpC 1852286 - 1854685 + | penicillin-binding protein 1C AHA_1694 1855590 - 1854787 - | hypothetical protein TERM 2135 1855450 - 1855393 - G 76 -6.7 -4.52857 | gap 1, opp_overlap 1855399 ATGCGCCAGACAAAA GCCGTGCAACCGCTCCAGCC-CTGCCTG GGC CGGGCAGAAGCAGTCGTGGTTGGCCGGC GTGCGCCAGCGACCG thiI 1855925 - 1857373 + | thiamine biosynthesis protein ThiI TERM 2136 1857401 - 1857418 + T 100 -8.4 -5.96894 | opp_overlap 1857389 1857401 GCATGCATAAAAAAA TCCGGC CAATGA GCCGGA TTTTTTTATTTCACT TERM 2137 1857418 - 1857401 - T 100 -9.1 -5.64274 | opp_overlap 1857401, overlap 1857389 GCATGCATAAAAAAA TCCGGCC AATG AGCCGGA TTTTTTTATTTCACT AHA_1696 1857988 - 1857452 - | hypothetical protein TERM 2138 1857914 - 1857889 - GT 72 -2.5 -4.75289 | gap 1, overlap 1857882 1857909 TATGACAACAGAAAA GCCTGCTTG-GT TCA ACGCAACCTGGC CAGGAGTGCGACTCT AHA_1697 1858578 - 1857946 - | hypothetical protein AHA_1698 1858995 - 1859903 + | flagellin TERM 2139 1859938 - 1859914 - f 100 -10 -5.18371 | GCTGATAAAAGAAAA CAGGGCGG TTGTTCAGG CCGCCCTG GTCAAGAGATGGAAC TERM 2140 1860081 - 1860101 + F 100 -11.1 -5.19328 | overlap 1860083 AGCGTATGCTCGTTT TAGGCCGGA TTT TCCGGCCTC TTTTTATTGTGCCGT TERM 2141 1860083 - 1860099 + F 100 -13.7 -4.22377 | overlap 1860081 CGTATGCTCGTTTTA GGCCGGA TTT TCCGGCC TCTTTTTATTGTGCC AHA_1699 1860482 - 1861387 + | flagellin TERM 2142 1861507 - 1861488 - g 82 -15 -3.2827 | opp_overlap 1861485 1861481 TCAGTCAAGTAGCAA GAGCGGCC AATC GGCCGCTC AAGTGCTATCTGGCA AHA_1700 1861426 - 1861866 + | flagellin protein TERM 2143 1862840 - 1862827 - g 72 -3.8 -4.56597 | overlap 1862837 TCGTGGCCGGAAAAA GCCA GAATGA TGGC GGAGCCTTGGCTGGT fliD 1861893 - 1863302 + | flagellar hook-associated protein 2 fliS 1863328 - 1863750 + | flagellar protein FliS TERM 2144 1864153 - 1864117 - f 73 -5.2 -4.62069 | gap 2, opp_overlap 1864125 1864127 1864137 CTTGCAGTTCAAAAA GAACAGG--AGGCCGCCA TGC TGGCGGTGTTGCCTGTTC GCCATCAGCTTAATA TERM 2145 1864127 - 1864141 + F 72 -11.4 -3.15503 | opp_overlap 1864117, overlap 1864125 1864137 AAAAAGAACAGGAGG CCGCCA TGC TGGCGG TGTTGCCTGTTCGCC AHA_1703 1864132 - 1866141 + | hypothetical protein TERM 2146 1866178 - 1866195 + T 100 -12.7 -5.88565 | opp_overlap 1866178 CTGCTGAATAAAAAA CACCGGC GCTT GCCGGTG TTTTTTTATTGTGAA TERM 2147 1866195 - 1866178 - T 100 -12.7 -5.4505 | opp_overlap 1866178 CTGCTGAATAAAAAA CACCGGC GCTT GCCGGTG TTTTTTTATTGTGAA TERM 2148 1866228 - 1866216 - T 80 -9.1 -4.18506 | TTATTGTGAAAATAA CCACG CAA CGTGG CCTACTGGTTCGGCT AHA_1704 1867051 - 1866230 - | periplasmic binding protein TERM 2149 1866652 - 1866678 + g 78 -6.6 -4.56597 | overlap 1866649 AGGCATCGGCCTCGG CATTGGCGGT TTGTCCC ACCCCCAATG TTTTTCCCAGCACCC AHA_1705 1867913 - 1867044 - | cobalamin biosynthesis protein CobD TERM 2150 1867944 - 1867968 + r 100 -17.9 -3.03441 | opp_overlap 1867944, overlap 1867946 GGCGGCCCCGAGCAA GATGGCCGCCG GAG TGGCGGCCATC TGTTCCAGCGTGGTG TERM 2151 1867968 - 1867944 - R 100 -17.2 -3.14132 | opp_overlap 1867944 1867946 GGCGGCCCCGAGCAA GATGGCCGCC GGAGT GGCGGCCATC TGTTCCAGCGTGGTG TERM 2152 1867946 - 1867966 + r 91 -14.7 -3.07344 | opp_overlap 1867944, overlap 1867944 CGGCCCCGAGCAAGA TGGCCGCCG GAG TGGCGGCCA TCTGTTCCAGCGTGG mtnN-2 1868683 - 1867991 - | MTA/SAH nucleosidase AHA_1707 1869549 - 1868791 - | hypothetical protein AHA_1708 1870571 - 1869639 - | GufA protein TERM 2153 1869932 - 1869901 - G 70 -7.2 -4.07568 | gap 1, overlap 1869902 TTGCCGGGCCGAAAA CCGGCGGCG-CACAT GGC AAGCGCCACCGCCAG CCCTTCCGGTATGTC TERM 2154 1870292 - 1870257 - G 77 -14 -3.38272 | gap 1, overlap 1870258 1870291 CAGCAGCAGGGAGAA GGCGCTGGCCGCCAGCA TCA TGCCGGCGG-CAAAGCC CAGCATGCTATCCTC AHA_1709 1870808 - 1872580 + | methyl-accepting chemotaxis protein TERM 2155 1872635 - 1872664 + T 100 -20.9 -3.62597 | opp_overlap 1872639 1872642, overlap 1872639 GTATTGGCAGGCACC CAAACAACCCGGC TCTG GCCGGGTTGTTTG TTATTGGCCAGTGGC TERM 2156 1872639 - 1872660 + T 100 -15.9 -4.44667 | opp_overlap 1872639 1872642, overlap 1872635 TGGCAGGCACCCAAA CAACCCGGC TCTG GCCGGGTTG TTTGTTATTGGCCAG TERM 2157 1872660 - 1872639 - T 100 -15.9 -3.6682 | opp_overlap 1872639 1872635, overlap 1872642 TGGCAGGCACCCAAA CAACCCGGC TCTG GCCGGGTTG TTTGTTATTGGCCAG TERM 2158 1872657 - 1872642 - T 90 -11.8 -3.9693 | opp_overlap 1872639 1872635, overlap 1872639 CAGGCACCCAAACAA CCCGGC TCTG GCCGGG TTGTTTGTTATTGGC TERM 2159 1872994 - 1873009 + T 90 -11.8 -3.98661 | opp_overlap 1872994 ACGGCCATAAAAAAA CCCGGC CTGG GCCGGG TTTGTGGTACGTGTG TERM 2160 1873009 - 1872994 - T 100 -11.8 -5.61596 | opp_overlap 1872994 ACGGCCATAAAAAAA CCCGGC CTGG GCCGGG TTTGTGGTACGTGTG AHA_1710 1873894 - 1873040 - | inositol-1-monophosphatase AHA_1711 1874045 - 1874500 + | hypothetical protein TERM 2161 1874532 - 1874571 + F 100 -18.8 -3.62096 | GTCCGGGCTGTTCAA GCGGCACAATATTTGTCA TAAC TGACCAGTATTGTGCCGC TTTGCCATGCTGGCG AHA_1712 1874693 - 1875355 + | glutathione S-transferase emrD 1875606 - 1876805 + | multidrug resistance protein D TERM 2162 1876843 - 1876822 - T 79 -7.2 -4.38712 | opp_overlap 1876824, overlap 1876824 CCGAGCGCTAGAAAA GACCCGCC CAAGCC GGCGGGTT TTTTATGGGCCGCTT TERM 2163 1876841 - 1876824 - T 76 -9.8 -3.80133 | opp_overlap 1876824, overlap 1876822 GAGCGCTAGAAAAGA CCCGCC CAAGCC GGCGGG TTTTTTATGGGCCGC TERM 2164 1876824 - 1876841 + T 100 -9.8 -5.24129 | opp_overlap 1876824 1876822 GAGCGCTAGAAAAGA CCCGCC CAAGCC GGCGGG TTTTTTATGGGCCGC TERM 2165 1876960 - 1876939 - T 100 -15.9 -5.42975 | opp_overlap 1876939 GGAGATAAAGAAAAA GCCCGTCAC GTTG GTGACGGGC TTTTTGCTGTTGGTA TERM 2166 1876939 - 1876960 + T 100 -15.9 -4.89233 | opp_overlap 1876939 GGAGATAAAGAAAAA GCCCGTCAC GTTG GTGACGGGC TTTTTGCTGTTGGTA AHA_1714 1877544 - 1877170 - | hypothetical protein TERM 2167 1877517 - 1877535 + g 71 -8.1 -3.87815 | opp_overlap 1877516, overlap 1877516 TGCCTTCCTCAATAC GGCGGAG CTGAT TTCCGCC TTTATCCACGTGGAC AHA_1715 1877676 - 1878245 + | YecA family protein TERM 2168 1878282 - 1878265 - f 100 -12.7 -4.66833 | opp_overlap 1878265 GTCGAACCCTAAAAA GAGCGCC TGGT GGCGCTC TTTTTACATCGGGAT TERM 2169 1878265 - 1878282 + F 100 -12.7 -4.66163 | opp_overlap 1878265 GTCGAACCCTAAAAA GAGCGCC TGGT GGCGCTC TTTTTACATCGGGAT ubiH 1878429 - 1879646 + | 2-polyprenyl-6-methoxyphenol 4-hydroxylase AHA_1717 1879742 - 1880971 + | 2-octaprenyl-6-methoxyphenol hydroxylase TERM 2170 1881081 - 1881108 + F 90 -12.8 -3.83205 | gap 1 AAACTAATGTGATGA GGCTGATGACCCG GTT TGGG-CATCAGCC TTTAATCTGGGCGCT TERM 2171 1882371 - 1882399 + G 74 -9.6 -3.85817 | gap 1, opp_overlap 1882371 ACCGCCGCTGGAGAA GAGCGGGAAGGTG TGAT CACCT-CCGGCTC TTTCTCGCCCACCCT gcvT 1881450 - 1882547 + | glycine cleavage system aminomethyltransferase T gcvH 1882653 - 1883042 + | glycine cleavage system H protein TERM 2172 1883048 - 1883075 + F 95 -14.1 -3.51924 | opp_overlap 1883043, overlap 1883049 CGAAGAGTAATGCCC CCGGGCCCTGC CAATGC GCAGGGCCCGC TTGTATAGGTGCCCG TERM 2173 1883049 - 1883074 + F 91 -17.6 -2.7094 | opp_overlap 1883043, overlap 1883048 GAAGAGTAATGCCCC CGGGCCCTGC CAATGC GCAGGGCCCG CTTGTATAGGTGCCC TERM 2174 1883250 - 1883235 - f 76 -11.8 -3.13432 | opp_overlap 1883227 1883226 CCGAACATGAGTGAA GCCGGC CGAG GCCGGC TGTCAGGCACTTAGT TERM 2175 1884084 - 1884104 + G 85 -14.7 -3.60296 | CTGGGTGCCGACGTG GTGCTGGGC TCA GCCCAGCGC TTTGGCGTGCCCATG TERM 2176 1885564 - 1885517 - g 71 -11.2 -3.42503 | gap 1, overlap 1885510 1885520 1885522 1885532 GGTCAAGACCGACAA GGAGAGCCGCAACAACGGCGCCG TGT CGGCGGCACCGTT-CGGCTCGGC CAGCATCCTGCCCAT TERM 2177 1885561 - 1885520 - g 79 -15.9 -2.86426 | gap 1, overlap 1885510 1885517 1885522 1885532 CAAGACCGACAAGGA GAGCCGCAACAACGGCGCCG TGT CGGCGGCACCGTT-CGGCTC GGCCAGCATCCTGCC TERM 2178 1885559 - 1885522 - g 71 -12.7 -2.97513 | gap 1, overlap 1885510 1885520 1885517 1885532 AGACCGACAAGGAGA GCCGCAACAACGGCGCCG TGT CGGCGGCACCGTT-CGGC TCGGCCAGCATCCTG TERM 2179 1885553 - 1885532 - g 73 -10.8 -3.64487 | overlap 1885510 1885522 1885520 1885517 GGAGAGCCGCAACAA CGGCGCCG TGTCGG CGGCACCG TTCGGCTCGGCCAGC gcvP 1883295 - 1886171 + | glycine dehydrogenase TERM 2180 1886213 - 1886232 + T 100 -13.6 -5.58522 | opp_overlap 1886213 GTTGGAAACCAACAA TGCCCTGC AATC GCAGGGCA TTTTTCTTTTGTGTC TERM 2181 1886232 - 1886213 - T 93 -13.6 -3.89354 | opp_overlap 1886213 GTTGGAAACCAACAA TGCCCTGC AATC GCAGGGCA TTTTTCTTTTGTGTC AHA_1721 1887359 - 1886286 - | hypothetical protein TERM 2182 1887328 - 1887318 - G 86 -5.4 -5.1356 | overlap 1887320 1887321 GGCCAGGAACAAAAA CATC TGA GATG CATCTCTCAGCATGG AHA_1722 1887466 - 1887762 + | ArsR family transcriptional regulator AHA_1723 1887834 - 1888217 + | arsenic operon regulator AHA_1724 1888221 - 1888649 + | arsenical resistance operon trans-acting repressor ArsD AHA_1725 1888718 - 1890517 + | arsenical pump-driving ATPase arsB 1890616 - 1891650 + | arsenical-resistance protein arsC-2 1891647 - 1892078 + | arsenate reductase AHA_1728 1892219 - 1892968 + | methyltransferase TERM 2183 1893034 - 1892999 - T 100 -16.8 -4.03413 | overlap 1893001 AGGGGCCCAGATAAA CAGCGGGCCCTTGCCA CCGG TGGCGAGGGCCCGCAA GGGCATGGCTGATCC TERM 2184 1893032 - 1893001 - T 100 -21.6 -3.61232 | overlap 1892999 GGGCCCAGATAAACA GCGGGCCCTTGCCA CCGG TGGCGAGGGCCCGC AAGGGCATGGCTGAT AHA_1729 1893387 - 1893079 - | hypothetical protein TERM 2185 1894493 - 1894521 + G 84 -8.7 -4.46212 | CTCGCCTACAGCCTG GGCGCCATGACCG GGC CGCTGCTGGCGCC TTTTGTCATGGCGCA AHA_1730 1893491 - 1894783 + | major facilitator family transporter TERM 2186 1894827 - 1894809 - T 100 -14.6 -5.5112 | opp_overlap 1894809 CGTACCAATAAAAAA GCCGACTC AGT GAGTCGGC TTTTTGTCCATCTGG TERM 2187 1894809 - 1894827 + T 100 -14.6 -4.89852 | opp_overlap 1894809 CGTACCAATAAAAAA GCCGACTC AGT GAGTCGGC TTTTTGTCCATCTGG AHA_1731 1896429 - 1894849 - | alkyl hydroperoxide reductase subunit F TERM 2188 1896509 - 1896480 - R 100 -15 -3.89346 | opp_overlap 1896485, overlap 1896483 TTGTCAGGCCAGAAA GCAGACCGGCCC TTGAAC GGGCCGGTCTTC AGAGCGGGGAGGCTT TERM 2189 1896506 - 1896483 - R 91 -15.3 -3.01918 | opp_overlap 1896485, overlap 1896480 TCAGGCCAGAAAGCA GACCGGCCC TTGAAC GGGCCGGTC TTCAGAGCGGGGAGG TERM 2190 1896485 - 1896504 + r 76 -12.1 -3.01712 | opp_overlap 1896483 1896480 AGGCCAGAAAGCAGA CCGGCCC TTGAAC GGGCCGG TCTTCAGAGCGGGGA AHA_1732 1897089 - 1896523 - | alkyl hydroperoxide reductase subunit C TERM 2191 1897475 - 1897445 - R 100 -8.9 -5.60993 | overlap 1897446 GCGCGGATAAAAAAA TCCCGGCGTCGTC GCAAG GACAAGGCCGGGT CATCAAACAAGGAAT TERM 2192 1897474 - 1897446 - R 90 -12.4 -3.95873 | overlap 1897445 CGCGGATAAAAAAAT CCCGGCGTCGTC GCAAG GACAAGGCCGGG TCATCAAACAAGGAA TERM 2193 1897705 - 1897717 + r 74 -3.3 -4.88258 | TATTGCCGATCAAGT GCGCT GAA AACGC TTTTATTGTAATTTT AHA_1733 1898196 - 1897750 - | CBS domain-containing protein queA 1898409 - 1899476 + | S-adenosylmethionine:tRNA ribosyltransferase-isomerase TERM 2194 1899463 - 1899485 + F 90 -12.7 -3.85817 | gap 1 TCGTCACCCGTCGCC GGGCGCAGGC ATAA GCC-GCGCCC TTTATACCGGGCCCT TERM 2195 1899590 - 1899566 - g 71 -5.7 -4.28432 | gap 1, opp_overlap 1899569 1899571, overlap 1899569 AATTTGAACTGAAAA CCACTGACGG CCGTGC CCGTC-GCGG CCAGCTGGTATTCGA tgt 1899547 - 1900683 + | queuine tRNA-ribosyltransferase yajC 1900734 - 1901069 + | preprotein translocase, YajC subunit TERM 2196 1901118 - 1901146 + G 95 -10.3 -4.60797 | opp_overlap 1901117 1901118 CCGCTGTGGAAATAC CTGATGGTGGTCG TGG TGATCGCCATCGG TTTTCTATATGCAGC secD-1 1901088 - 1902941 + | protein-export membrane protein SecD secF-1 1902951 - 1903898 + | protein-export membrane protein SecF TERM 2197 1903906 - 1903923 + F 100 -14.1 -4.27117 | opp_overlap 1903906 TGCCGTAAATGACAA GGGCGCC GCGA GGCGCCC TTTCTCTTATCGCCC TERM 2198 1903923 - 1903906 - f 95 -14.1 -3.60151 | opp_overlap 1903906 TGCCGTAAATGACAA GGGCGCC GCGA GGCGCCC TTTCTCTTATCGCCC AHA_1739 1903998 - 1904366 + | rhodanese domain-containing protein AHA_1740 1904511 - 1905404 + | lipoprotein NlpI TERM 2199 1905456 - 1905440 - T 88 -10.1 -4.44915 | opp_overlap 1905440 GAATGATGTAGAAAA GGCCTCA TTG CGAGGCC TTTTTGCTGTCCGGG TERM 2200 1905440 - 1905456 + T 93 -9.4 -4.8048 | opp_overlap 1905440 GAATGATGTAGAAAA GGCCTC ATTGC GAGGCC TTTTTGCTGTCCGGG AHA_1741 1906394 - 1905522 - | collagenase TERM 2201 1905585 - 1905608 + g 72 -12.4 -3.37612 | GTCGCGCTCCTGCTG CAGGGGCAGG GGAG CCTGGCCCTG TTGGTTGGCCTTGAA AHA_1742 1907402 - 1906407 - | STM-proteaseA TERM 2202 1907713 - 1907745 + Gr 86 -12.1 -3.85698 | opp_overlap 1907719 1907721 1907722, overlap 1907719 CTGCTGGCCAGCGTG TTCAAAGAGGCCATC GCA GATGGCGACTTTGAA TTTCTGGCAGGCAAG TERM 2203 1908104 - 1908090 - gR 72 -11.4 -3.05844 | GGGCTCAGCGCAAGA GGCGCA CTC TGCGCC GGCGGGTGGGGTTGC AHA_1743 1908495 - 1908079 - | hypothetical protein AHA_1744 1907593 - 1908132 + | sterol binding protein AHA_1745 1908675 - 1909400 + | RNA methyltransferase iscR 1909494 - 1909997 + | iron-sulfur cluster assembly transcription factor IscR iscS 1910055 - 1911269 + | cysteine desulfurase IscS iscU 1911311 - 1911694 + | scaffold protein iscA 1911710 - 1912033 + | iron-sulfur cluster assembly protein IscA hscB 1912156 - 1912674 + | Fe-S protein assembly co-chaperone HscB TERM 2204 1913127 - 1913104 - g 75 -4.4 -4.77986 | gap 1, overlap 1913106 CGAAATACTCAAAAA GCTGGCCGAGC GGG GCGCTGCC-GC CCTCGGTGGCGATCT hscA 1912703 - 1914550 + | Fe-S protein assembly chaperone HscA fdx 1914552 - 1914890 + | ferredoxin, 2Fe-2S type, ISC system TERM 2205 1914959 - 1914983 + F 90 -5.6 -5.252 | gap 1 TAATGATATGGTGAA GGCCGTGACCC TTGA GGGA-GCGGCC TTTTTTGTGCCCGTG TERM 2206 1916122 - 1916073 - g 86 -11.9 -4.24002 | opp_overlap 1916069, overlap 1916074 CGCCAAAGCCGAAAA CGAGCAGGCCTGGGCGCTGCCGC TGGA GCCGTGGCACGCAGGCCAGCTCA CCTCTGCCTTTGCCG TERM 2207 1916121 - 1916074 - g 73 -13.2 -3.13919 | opp_overlap 1916069, overlap 1916073 GCCAAAGCCGAAAAC GAGCAGGCCTGGGCGCTGCCGC TGGA GCCGTGGCACGCAGGCCAGCTC ACCTCTGCCTTTGCC pepB 1915048 - 1916349 + | aminopeptidase B TERM 2208 1916551 - 1916589 + G 70 -13.1 -2.89564 | gap 1 GATCCATCTGGTGAC CGCC-AGCCCCTTGCTGG ATAT CCAGCAGGCGGCACGGCG TCTGTGCAGTCAGGG AHA_1754 1916453 - 1917736 + | aminopeptidase B TERM 2209 1917750 - 1917767 + F 85 -12.7 -3.53012 | opp_overlap 1917750 GACCGGCAACGACAA GGGCACC TGCG GGTGCCC TTTCGACAGGGGGAG TERM 2210 1917767 - 1917750 - f 85 -12.7 -3.51329 | opp_overlap 1917750 GACCGGCAACGACAA GGGCACC TGCG GGTGCCC TTTCGACAGGGGGAG AHA_1755 1918006 - 1918434 + | nucleoside diphosphate kinase TERM 2211 1918456 - 1918471 + F 100 -10.4 -5.45813 | opp_overlap 1918450 1918451 TCGAAAGAACCCCAA GGGAGC CTCG GCTCCC TTTTGTTTTTTGGTC TERM 2212 1918630 - 1918619 - g 84 -2.2 -5.30616 | overlap 1918613 TGAGCGAAACAAAAA CCAA CCTG CTGG ATCTTGATCGGGATG AHA_1756 1918603 - 1919706 + | hypothetical protein TERM 2213 1920204 - 1920186 - g 100 -13.8 -4.29738 | CGATACCTATGAAAA CGCGGCAC TTT GCGCCGCG CAAAATCGCAGAAAT pilF 1919719 - 1920510 + | type IV pilus biogenesis/stability protein PilW AHA_1758 1920500 - 1921438 + | hypothetical protein TERM 2214 1921539 - 1921512 - g 71 -13.4 -2.52543 | gap 1, overlap 1921498 ATGGTCGGTAATGTA CCG-GTTGGGGGC GAT GCCCCCATCACGG TGCAGACCATGACCA ispG 1921449 - 1922564 + | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase TERM 2215 1922571 - 1922593 + F 71 -9.8 -3.47526 | opp_overlap 1922573, overlap 1922570 1922573 1922590 GAGGGTTGAGCAACC AAGGGCCACT CAG GGTGGCCCTG TCTTTAGGTTGCTGA TERM 2216 1922573 - 1922591 + F 78 -12.4 -3.30507 | opp_overlap 1922573, overlap 1922571 1922570 1922590 GGGTTGAGCAACCAA GGGCCACT CAG GGTGGCCC TGTCTTTAGGTTGCT TERM 2217 1922591 - 1922573 - f 80 -11.7 -3.39895 | opp_overlap 1922573 1922571 1922570 1922590 GGGTTGAGCAACCAA GGGCCAC TCAGG GTGGCCC TGTCTTTAGGTTGCT hisS 1922703 - 1923980 + | histidyl-tRNA synthetase AHA_1761 1923984 - 1924634 + | TPR repeat-containing protein AHA_1762 1924654 - 1925811 + | PQQ repeat-containing protein TERM 2218 1925834 - 1925859 + F 100 -14.7 -4.06384 | opp_overlap 1925831, overlap 1925832 TCAATCTGAATATCC GGCTCCTGGTC TTCG GACCCGGAGCC TTTGTCGTCTTGAGA TERM 2219 1927342 - 1927324 - g 72 -7.4 -4.16909 | overlap 1927325 AGGGCAAGAAAAATA CCCTGACT CTG AGCCAGGA GCGTCAACGCAAGCG engA 1925886 - 1927385 + | GTP-binding protein EngA TERM 2220 1927393 - 1927414 + F 100 -13 -5.24129 | AGAAATAAGGCCCAG CGGCTGCC CTCACC GGCAGCCG TTTTTTCTAGGGCCA TERM 2221 1927437 - 1927472 + F 100 -20.6 -3.53012 | TAGGGCCAAGGGGAG GGGAATGTGCAGTGGG CTGA CCCACTGCACATTCAC TTTGCAAGGAGCCAA AHA_1764 1927490 - 1927723 + | ubiquitin ligase sinat5 TERM 2222 1927751 - 1927736 - Tf 100 -11.8 -5.26316 | opp_overlap 1927736 TGAGGCGATAAAAAA CCCGGC GATT GCCGGG TTTATGCTGTGTGTT TERM 2223 1927736 - 1927751 + TF 90 -11.8 -4.05991 | opp_overlap 1927736 TGAGGCGATAAAAAA CCCGGC GATT GCCGGG TTTATGCTGTGTGTT TERM 2224 1927835 - 1927858 + TF 74 -6.6 -4.26881 | overlap 1927836 TCATTGAGCTTGAGT TTGCGTCTGG GGCT CCAGCCGCAC TTTGCTTTTCTGACC TERM 2225 1928078 - 1928067 - Tf 72 -2.2 -4.87389 | CACCCGAAAAACAAA CCTG TCAA CAAG GGATCAGCGCAGGGT AHA_1765 1929572 - 1928082 - | solute-binding family 3 protein TERM 2226 1928542 - 1928561 + gF 72 -11.4 -3.06302 | AGCCGGTTGTTGACC CCCATCGC CTTG GCGGTGGG TTCGGTCAGCATCAT TERM 2227 1929250 - 1929207 - Gf 71 -9.4 -3.75153 | gap 1, opp_overlap 1929243, overlap 1929209 GGGGCCGAAGCGAAA CAGCTGGCGCCG-CTCCGGGG TGA CCACGATGGCGGCGGCAGCCA GATCCAGCTTGCCCT TERM 2228 1929248 - 1929209 - Gf 80 -12 -3.46068 | gap 1, opp_overlap 1929243, overlap 1929207 GGCCGAAGCGAAACA GCTGGCGCCG-CTCCGGGG TGA CCACGATGGCGGCGGCAGC CAGATCCAGCTTGCC TERM 2229 1929793 - 1929773 - gR 72 -4 -4.56597 | gap 1 TTTCGTGTCCAAAAA CTGCTGCAA CGCT TCGC-GCAG ATGAAACAGGAGAGA TERM 2230 1930862 - 1930830 - gR 78 -13.3 -2.62184 | GCGCGTTTGACATCA TGCAGGAGGGGCCGC TCG GCGGCGCCGCCTTCA ACAACGAGTTCGGTC TERM 2231 1933354 - 1933401 + Gr 76 -10.4 -3.72576 | gap 1, overlap 1933355 AGTGGAGGTGCGCGA TGCCG-CTCACCTGGCCGCGCTG CAA CAGAGCGGGCTGGTGGGGCTGCG TTTCGTCGACAACCG TERM 2232 1933355 - 1933400 + Gr 72 -11.7 -2.83403 | gap 1, overlap 1933354 GTGGAGGTGCGCGAT GCCG-CTCACCTGGCCGCGCTG CAA CAGAGCGGGCTGGTGGGGCTGC GTTTCGTCGACAACC purL 1929554 - 1933627 + | phosphoribosylformylglycinamidine synthase TERM 2233 1933666 - 1933650 - TR 100 -10.8 -5.95539 | opp_overlap 1933650 TCGCAAACAAAAAAA CCGGCC CCTGT GGCCGG TTTTTTTATGGCGGC TERM 2234 1933650 - 1933666 + Tr 100 -10.8 -5.60993 | opp_overlap 1933650 TCGCAAACAAAAAAA CCGGCC CCTGT GGCCGG TTTTTTTATGGCGGC AHA_1767 1935215 - 1933689 - | sensory box protein AHA_1768 1936664 - 1935231 - | response regulator/sensory box/hdig domain-containing protein AHA_1769 1937791 - 1936661 - | hypothetical protein TERM 2235 1937945 - 1937961 + r 73 -10.8 -3.34517 | opp_overlap 1937945, overlap 1937943 GGGCAGATAAAAAAA CCGGCC ACTTG GGCCGG TCTTTGAGGGGGCGT TERM 2236 1937961 - 1937945 - R 100 -10.8 -5.71712 | opp_overlap 1937945 1937943 GGGCAGATAAAAAAA CCGGCC ACTTG GGCCGG TCTTTGAGGGGGCGT AHA_1770 1939444 - 1937981 - | NADH dehydrogenase subunit N AHA_1771 1941026 - 1939506 - | NADH dehydrogenase subunit M AHA_1772 1942952 - 1941105 - | NADH dehydrogenase subunit L AHA_1773 1943257 - 1942949 - | NADH-quinone oxidoreductase chain k AHA_1774 1943805 - 1943257 - | NADH dehydrogenase subunit J AHA_1775 1944358 - 1943816 - | NADH dehydrogenase subunit I AHA_1776 1945455 - 1944487 - | NADH dehydrogenase subunit H TERM 2237 1944893 - 1944881 - G 71 -9.1 -3.76759 | AGGAAGGTGATGAAA CCCAG GAT CTGGG GGATCACGTTCCACA AHA_1777 1948181 - 1945452 - | NADH dehydrogenase subunit G TERM 2238 1947109 - 1947127 + g 73 -13.2 -3.21772 | opp_overlap 1947106, overlap 1947108 GTGCGCACACCACCG TGCTGCAG GAT CTGCAGCA TCTTCTGCAGGCATT nuoF 1949628 - 1948261 - | NADH dehydrogenase I subunit F AHA_1779 1950167 - 1949625 - | NADH dehydrogenase subunit E AHA_1780 1952034 - 1950229 - | bifunctional NADH:ubiquinone oxidoreductase subunit C/D AHA_1781 1952711 - 1952037 - | NADH dehydrogenase subunit B AHA_1782 1953145 - 1952741 - | NADH dehydrogenase subunit A TERM 2239 1953413 - 1953361 - R 74 -3.4 -4.85782 | opp_overlap 1953365 1953380, overlap 1953373 1953374 1953378 CGTGTGAAAAATAAA CTAATCGTGAAATGAG-AGACCCCGC CAG GCGGGGTCTGCTCGA-TCAGGGTTTG AGGATGGGTAGCGCC TERM 2240 1953402 - 1953373 - R 86 -12.9 -3.6288 | gap 1, opp_overlap 1953365 1953380, overlap 1953361 1953374 1953378 AAACTAATCGTGAAA TGAG-AGACCCCGC CAG GCGGGGTCTGCTCG ATCAGGGTTTGAGGA TERM 2241 1953401 - 1953374 - R 90 -16.4 -2.77005 | gap 1, opp_overlap 1953365 1953380, overlap 1953373 1953361 1953378 AACTAATCGTGAAAT GAG-AGACCCCGC CAG GCGGGGTCTGCTC GATCAGGGTTTGAGG TERM 2242 1953396 - 1953378 - R 93 -16 -3.01269 | opp_overlap 1953365 1953380, overlap 1953374 1953373 1953361 AATCGTGAAATGAGA GACCCCGC CAG GCGGGGTC TGCTCGATCAGGGTT TERM 2243 1953380 - 1953394 + r 76 -12.8 -2.80816 | opp_overlap 1953378 1953374 1953373 1953361, overlap 1953365 TCGTGAAATGAGAGA CCCCGC CAG GCGGGG TCTGCTCGATCAGGG motB 1954279 - 1953404 - | flagellar motor protein MotB AHA_1784 1955015 - 1954257 - | chemotaxis MotA protein TERM 2244 1955275 - 1955260 - R 100 -8.2 -5.15969 | opp_overlap 1955260 1955255 TTGGAAGGCAAAAAA CCGGCC ATTG AGCCGG TTTTCTTAGATTGGA TERM 2245 1955260 - 1955275 + r 86 -7.5 -4.72029 | opp_overlap 1955260, overlap 1955255 TTGGAAGGCAAAAAA CCGGC CATTGA GCCGG TTTTCTTAGATTGGA TERM 2246 1955462 - 1955433 - R 78 -12.3 -3.16106 | opp_overlap 1955440, overlap 1955440 TGAAAACCTCAAAAG CAAAAAACCGACC ATCA GGTCGGTTCTTTA AAATTTGGCGGTGAG TERM 2247 1955455 - 1955440 - R 100 -10.4 -5.46698 | opp_overlap 1955440, overlap 1955433 CTCAAAAGCAAAAAA CCGACC ATCA GGTCGG TTCTTTAAAATTTGG TERM 2248 1955440 - 1955455 + r 83 -10.4 -3.98804 | opp_overlap 1955433 1955440 CTCAAAAGCAAAAAA CCGACC ATCA GGTCGG TTCTTTAAAATTTGG AHA_1786 1956318 - 1955701 - | hypothetical protein AHA_1787 1957067 - 1956339 - | hypothetical protein TERM 2249 1956485 - 1956438 - G 71 -12.6 -3.06183 | gap 1, opp_overlap 1956442, overlap 1956442 1956454 GCGACCGGCACCGAA GCCACCGGC-GAGGTAAGCGGCG CGG CGCCGGCCACCTCTGCCGCCGCC ACCACCACGCAGGTT AHA_1788 1957654 - 1957064 - | LemA protein mepA 1958494 - 1957712 - | penicillin-insensitive murein endopeptidase AHA_1790 1958652 - 1959194 + | hypothetical protein AHA_1791 1959405 - 1959692 + | RNA-binding protein TERM 2250 1959713 - 1959735 + T 100 -14.9 -5.38054 | opp_overlap 1959713 CTCGATAACGCAAAA CGGCATGGG TTCCC CCCATGCCG TTTTTGTTTCTGGCG TERM 2251 1959735 - 1959713 - T 100 -14.9 -4.3208 | opp_overlap 1959713 CTCGATAACGCAAAA CGGCATGGG TTCCC CCCATGCCG TTTTTGTTTCTGGCG AHA_1792 1960663 - 1959764 - | aldo/keto reductase family oxidoreductase TERM 2252 1960703 - 1960693 - H 90 -5.4 -5.1925 | opp_overlap 1960693 1960691 1960698 GGATAAGGGAAAAAA TGCT GCC AGCA TCTTGGTCTCTTCTG AHA_1793 1960779 - 1961186 + | bacteriophage CI repressor protein, putative TERM 2253 1961912 - 1961933 + G 71 -10.8 -3.43071 | opp_overlap 1961909 TCTCATCAACCAGTT GTCGCCGG CCCAGT CCGGCGGC TTCCTTGATCTGCAG AHA_1794 1961268 - 1961969 + | CsgA AHA_1795 1962060 - 1963079 + | L-allo-threonine aldolase TERM 2254 1963120 - 1963091 - T 100 -19.5 -3.06831 | opp_overlap 1963091 1963096, overlap 1963096 TTAAGGTTCACTCAA TAAAACAGGGCGC CAAG GCGCCCTGTTTTA TTGTTGAGAAGAAAG TERM 2255 1963091 - 1963120 + T 100 -19.5 -3.61398 | opp_overlap 1963091 1963096, overlap 1963096 TTAAGGTTCACTCAA TAAAACAGGGCGC CAAG GCGCCCTGTTTTA TTGTTGAGAAGAAAG TERM 2256 1963096 - 1963115 + T 100 -15 -4.89477 | opp_overlap 1963091 1963096, overlap 1963091 GTTCACTCAATAAAA CAGGGCGC CAAG GCGCCCTG TTTTATTGTTGAGAA TERM 2257 1963115 - 1963096 - T 100 -15 -4.67982 | opp_overlap 1963096 1963091, overlap 1963091 GTTCACTCAATAAAA CAGGGCGC CAAG GCGCCCTG TTTTATTGTTGAGAA AHA_1796 1963577 - 1963140 - | GGDEF domain-containing protein AHA_1797 1964614 - 1963580 - | response regulator TERM 2258 1963979 - 1963939 - G 78 -15.5 -2.73994 | overlap 1963936 AGTCGTGGAACAGGA TCAGCGCCTCACCGGCG ATACCGG CGCCGATGAAGCCCTGA CAGACGGCGGAGAGG TERM 2259 1964230 - 1964269 + g 74 -15 -2.60496 | gap 1, overlap 1964229 1964227 1964232 1964257 1964258 CGGCGGTCCGGATGT CATGTGCAGTGGCGGTGCC TTT GGC-CTGCCACAGCTCATG CTGTTTCAGCAGGGC AHA_1798 1965607 - 1964669 - | LysR family transcriptional regulator TERM 2260 1964819 - 1964829 + g 76 -8.2 -4.13767 | CAACATATAGAAGGG CCGG TTG CCGG TTTTCCAGTCGGGCA AHA_1799 1966382 - 1965681 - | hypothetical protein TERM 2261 1966318 - 1966298 - G 100 -9.9 -5.14894 | opp_overlap 1966303 AAAAAAGTATAAAAA TCATAGTAA TGG TTACTATGA TGCCCAACAATACCA TERM 2262 1966440 - 1966478 + H 83 -12.3 -3.727 | gap 1, overlap 1966441 TGGATCCGATTTTGT ACCAGCGCCGG-GTGCCC GGGA GGGCCCTCCGTCGCTGGG TTTCCCTGTGATCAC TERM 2263 1966441 - 1966477 + H 86 -15.8 -2.83299 | gap 1, overlap 1966440 GGATCCGATTTTGTA CCAGCGCCGG-GTGCCC GGGA GGGCCCTCCGTCGCTGG GTTTCCCTGTGATCA TERM 2264 1966801 - 1966788 - g 72 -4.5 -4.58283 | CAAGGGCGTGAAAAA GCAGA TCTA CCTGC GCCTCTCCGGCATCC AHA_1800 1966555 - 1968486 + | PAS/GGDEF domain-containing protein TERM 2265 1968510 - 1968536 + F 100 -13.6 -4.66609 | overlap 1968512 TCTGCGGCGCTGCTA ATGCGAGGGGCC TTG GGCCCCTCGCTG TTTTTGGGTAGAGTG TERM 2266 1968512 - 1968534 + F 100 -20.6 -3.94812 | overlap 1968510 TGCGGCGCTGCTAAT GCGAGGGGCC TTG GGCCCCTCGC TGTTTTTGGGTAGAG AHA_1801 1968575 - 1969300 + | nitroreductase A AHA_1802 1969489 - 1970253 + | ATPase involved in DNA repair TERM 2267 1970281 - 1970297 + G 100 -13.7 -4.42062 | opp_overlap 1970280 CACTCGATACCACAC TGGGGCC GAT GGCCCCA TTTGTTTGCCAGCTG AHA_1803 1970256 - 1970801 + | hypothetical protein TERM 2268 1970828 - 1970807 - T 95 -14.4 -3.73224 | opp_overlap 1970807 CCAGGCTTGATGAAA CGGGGCCG CTTGAC CGGCCCCG TTTCATAGCCGAGAT TERM 2269 1970807 - 1970828 + T 95 -14.4 -3.72695 | opp_overlap 1970807 CCAGGCTTGATGAAA CGGGGCCG CTTGAC CGGCCCCG TTTCATAGCCGAGAT AHA_1804 1972056 - 1970848 - | major facilitator family transporter TERM 2270 1972970 - 1972997 + G 84 -4.1 -5.14563 | gap 1, overlap 1972983 1972984 GGCGGGGGGATCCGC TCTC-CATGGCG AACCG CGCCTTGCGGGA TTTTTTGCTGGCGCA AHA_1805 1972150 - 1973025 + | transcriptional regulator cysB 1973099 - 1974073 + | transcriptional regulator CysB TERM 2271 1974132 - 1974092 - T 100 -19.9 -2.85351 | opp_overlap 1974103, overlap 1974103 CGCGGCGATATGAGA GCAACAAAAAACGCCTCCC GAT GGGAGGCGTTTTTCATGGC GGCGAGCGGCGAGGC TERM 2272 1974103 - 1974121 + T 100 -16 -4.72272 | opp_overlap 1974103 1974092 GAGAGCAACAAAAAA CGCCTCCC GAT GGGAGGCG TTTTTCATGGCGGCG TERM 2273 1974121 - 1974103 - T 100 -16 -5.5353 | opp_overlap 1974103, overlap 1974092 GAGAGCAACAAAAAA CGCCTCCC GAT GGGAGGCG TTTTTCATGGCGGCG ribA 1974745 - 1974152 - | GTP cyclohydrolase II TERM 2274 1974798 - 1974777 - H 76 -2.9 -5.0133 | gap 1, opp_overlap 1974778, overlap 1974778 CAGCTGCTTAAAAAA GGGCG-GCCA GTT TAGCGCGCCT TGTGCGGAACAACCA cmk 1974995 - 1975687 + | cytidylate kinase TERM 2275 1975750 - 1975729 - f 74 -6.5 -4.34267 | opp_overlap 1975734 GCAGATAATTTAAAA CAACCCCGC TTGT GCCGGATTG CAAGTGGATGTTTCA TERM 2276 1976066 - 1976045 - g 74 -5.1 -4.56597 | overlap 1976050 CTGTCCCGCGAAAAA GCCAAGC GCCACGAA GCCTGGC TGCAGCTTGAAAAAG TERM 2277 1976097 - 1976081 - g 72 -4.4 -4.59773 | overlap 1976096 CTGCAGCTTGAAAAA GCTTAC GAAGA GCAAGC TACCGTTATCGGTAT TERM 2278 1976242 - 1976231 - g 72 -4.4 -4.65933 | CACCTGGAAAACAAA GAAC TCGA GTTC AAAGTCATCAAGCTG rpsA 1975781 - 1977451 + | 30S ribosomal protein S1 TERM 2279 1977494 - 1977464 - f 100 -18.4 -3.06133 | opp_overlap 1977469, overlap 1977452 1977469 TAATCCTTGATGCAA GAAAAGGGCGGCGT GTC ACGCCGCCCTTTTT TATCATTGGCGTAAT TERM 2280 1977469 - 1977489 + F 100 -18.3 -5.37345 | opp_overlap 1977464 1977469 CTTGATGCAAGAAAA GGGCGGCGT GTC ACGCCGCCC TTTTTTATCATTGGC TERM 2281 1977489 - 1977469 - f 100 -18.3 -4.67982 | opp_overlap 1977469, overlap 1977464 CTTGATGCAAGAAAA GGGCGGCGT GTC ACGCCGCCC TTTTTTATCATTGGC ihfB 1977547 - 1977831 + | integration host factor, beta subunit TERM 2282 1977860 - 1977841 - f 73 -6.4 -4.50943 | opp_overlap 1977842, overlap 1977842 GAATAATGCAGAAAA TGGCATAC TTGG GTATGCCT TTTTTGTTTTTATGG TERM 2283 1977842 - 1977859 + F 100 -9.9 -5.98675 | opp_overlap 1977842 1977841 AATAATGCAGAAAAT GGCATAC TTGG GTATGCC TTTTTTGTTTTTATG AHA_1811 1977988 - 1978272 + | hypothetical protein TERM 2284 1978894 - 1978867 - g 71 -8.4 -3.92522 | gap 1 CGTGAAGGGGACAAA CCCGC-CGGGCTT GCC AAGCTCAAGCGGG CGCTCAGCGTCAACC AHA_1812 1978282 - 1979448 + | hypothetical protein TERM 2285 1979468 - 1979490 + F 88 -11.2 -4.13767 | opp_overlap 1979466, overlap 1979470 CACCACAAGATCATG AGCCAGGCCG CTG CGGCCTGGTG TTTTCAGGTCGAGCC TERM 2286 1979470 - 1979488 + F 100 -16 -3.6692 | opp_overlap 1979466, overlap 1979468 CCACAAGATCATGAG CCAGGCCG CTG CGGCCTGG TGTTTTCAGGTCGAG pyrF 1979550 - 1980251 + | orotidine 5'-phosphate decarboxylase TERM 2287 1980261 - 1980282 + TF 100 -17.3 -3.05384 | opp_overlap 1980252 1980253 1980261, overlap 1980273 CGATAATGGACAGGA TGCCGGCCC GATG GGGCCGGCA TTGCATCAGGGGCGG TERM 2288 1980282 - 1980261 - Tf 90 -17.3 -2.67705 | opp_overlap 1980261 1980273, overlap 1980252 1980253 CGATAATGGACAGGA TGCCGGCCC GATG GGGCCGGCA TTGCATCAGGGGCGG AHA_1814 1980856 - 1980299 - | integral membrane protein TERM 2289 1981198 - 1981219 + GH 90 -5.7 -5.1861 | overlap 1981200 1981203 GGGAGAGGGAGACGG CCGAGCCGG CTCG CCGGGTCTG TTTTTTGCTGCTCGA TERM 2290 1981200 - 1981217 + GH 70 -6.9 -4.22314 | overlap 1981198 1981203 GAGAGGGAGACGGCC GAGCCGG CTCG CCGGGTC TGTTTTTTGCTGCTC AHA_1815 1980807 - 1981493 + | DTW domain-containing protein exsB 1981516 - 1982223 + | exsB protein AHA_1817 1982243 - 1982956 + | radical activating enzyme TERM 2291 1983060 - 1983082 + G 76 -9.1 -4.08692 | overlap 1983079 ATTCCGGAGCCTTAT CTGGTGTGG CTGGC CCGCACCGG TTTTCCCGCCGGTTC AHA_1818 1982958 - 1983188 + | hypothetical protein AHA_1819 1983185 - 1983748 + | ATP:cob(I)alamin adenosyltransferase, putative TERM 2292 1983798 - 1983764 - T 100 -21.8 -2.89881 | opp_overlap 1983774, overlap 1983767 1983774 TAGCCAGGCTACAGA CAATAAAAAACCTCGC GAT GCGAGGTTTTTTATTG CGACGATGCGGCTTT TERM 2293 1983795 - 1983767 - T 100 -17.7 -3.59698 | opp_overlap 1983774, overlap 1983764 1983774 CCAGGCTACAGACAA TAAAAAACCTCGC GAT GCGAGGTTTTTTA TTGCGACGATGCGGC TERM 2294 1983788 - 1983774 - T 100 -11.4 -5.62045 | opp_overlap 1983774, overlap 1983767 1983764 ACAGACAATAAAAAA CCTCGC GAT GCGAGG TTTTTTATTGCGACG TERM 2295 1983774 - 1983788 + T 100 -11.4 -5.4505 | opp_overlap 1983774 1983767 1983764 ACAGACAATAAAAAA CCTCGC GAT GCGAGG TTTTTTATTGCGACG AHA_1820 1984219 - 1983815 - | DNA-binding protein StpA TERM 2296 1983883 - 1983897 + g 86 -7.1 -5.00884 | CGGAAGGCATGCGGC CCTGG CCGGT CCAGG TTTTTTCCACGCCGT AHA_1821 1984799 - 1986379 + | Na(+)/H(+) antiporter family protein TERM 2297 1986410 - 1986383 - f 100 -9.8 -4.85599 | opp_overlap 1986385 1986386, overlap 1986386 GCCATCGCATAAAAA GAACAAGGGGCC GCCA GGCCCCTTGGTT TTGTTGGGGGCTTTG TERM 2298 1986385 - 1986408 + F 100 -12.4 -4.64334 | opp_overlap 1986383 1986386, overlap 1986386 CATCGCATAAAAAGA ACAAGGGGCC GCCA GGCCCCTTGG TTTTGTTGGGGGCTT TERM 2299 1986407 - 1986386 - f 100 -15.9 -4.53475 | opp_overlap 1986385 1986386, overlap 1986383 ATCGCATAAAAAGAA CAAGGGGCC GCCA GGCCCCTTG GTTTTGTTGGGGGCT TERM 2300 1986386 - 1986407 + F 100 -15.9 -3.37877 | opp_overlap 1986386 1986383, overlap 1986385 ATCGCATAAAAAGAA CAAGGGGCC GCCA GGCCCCTTG GTTTTGTTGGGGGCT tdk 1986466 - 1987047 + | thymidine kinase TERM 2301 1987103 - 1987075 - T 86 -14.7 -2.96216 | opp_overlap 1987081, overlap 1987081 CGCGATGAGTAGATA GAAAAAGGCGCCA ATC TGGCGCCTTTTTT GTTGCTGGTGGTTCA TERM 2302 1987081 - 1987097 + T 100 -13.7 -5.52023 | opp_overlap 1987075 1987081 GAGTAGATAGAAAAA GGCGCCA ATC TGGCGCC TTTTTTGTTGCTGGT TERM 2303 1987097 - 1987081 - T 100 -13.7 -5.05601 | opp_overlap 1987081, overlap 1987075 GAGTAGATAGAAAAA GGCGCCA ATC TGGCGCC TTTTTTGTTGCTGGT AHA_1823 1988453 - 1987116 - | hypothetical protein AHA_1824 1988606 - 1989067 + | hypothetical protein TERM 2304 1989164 - 1989109 - f 83 -7.7 -4.65895 | gap 3, opp_overlap 1989117 1989124, overlap 1989143 CGCCTGATGCAAAAA GCCGTTGACGCCGG--CGGGGCTT TCCCCTAAATT ACGCCCCGTTCCAGCG-CAACGGC GCAGCGAACACAGTG TERM 2305 1989345 - 1989304 - f 100 -26.3 -3.57144 | opp_overlap 1989309 1989314, overlap 1989309 1989314 TCCCTCACCGCCAAA TAAAACAAAAGGGCCTGTC TTGT GACAGGCCCTTTTGTTTTA TCCGGTGACGGGCGG TERM 2306 1989340 - 1989309 - f 100 -21.8 -4.87803 | opp_overlap 1989309 1989314, overlap 1989304 1989314 CACCGCCAAATAAAA CAAAAGGGCCTGTC TTGT GACAGGCCCTTTTG TTTTATCCGGTGACG TERM 2307 1989309 - 1989340 + F 100 -21.8 -4.4009 | opp_overlap 1989309 1989304 1989314, overlap 1989314 CACCGCCAAATAAAA CAAAAGGGCCTGTC TTGT GACAGGCCCTTTTG TTTTATCCGGTGACG TERM 2308 1989335 - 1989314 - f 100 -15.9 -5.34857 | opp_overlap 1989314 1989309, overlap 1989309 1989304 CCAAATAAAACAAAA GGGCCTGTC TTGT GACAGGCCC TTTTGTTTTATCCGG TERM 2309 1989314 - 1989335 + F 100 -15.9 -5.18371 | opp_overlap 1989309 1989304 1989314, overlap 1989309 CCAAATAAAACAAAA GGGCCTGTC TTGT GACAGGCCC TTTTGTTTTATCCGG TERM 2310 1989477 - 1989506 + F 72 -12.3 -2.72043 | opp_overlap 1989484, overlap 1989484 ACCCAGCGTACAGAT TGAAAAACCGACC TGAT GGTCGGTTTTTTG CTTTGGGGAAGAATT TERM 2311 1989484 - 1989499 + F 100 -10.4 -5.37593 | opp_overlap 1989484, overlap 1989477 GTACAGATTGAAAAA CCGACC TGAT GGTCGG TTTTTTGCTTTGGGG TERM 2312 1989499 - 1989484 - f 100 -10.4 -4.72846 | opp_overlap 1989484 1989477 GTACAGATTGAAAAA CCGACC TGAT GGTCGG TTTTTTGCTTTGGGG TERM 2313 1989604 - 1989592 - f 71 -10.5 -3.18264 | GCTTGCAGTGATGAA CGGCC GCA GGCCG CCCCGAAGGAGTGAG TERM 2314 1989698 - 1989657 - f 100 -20.5 -3.57144 | opp_overlap 1989661 1989667, overlap 1989661 1989667 TCCTTCATCGCCAAA TAAAGTAAAAGGGCTTGTC GAAA GACAGGCCCTTTTACTTTA TGGGCTGAAGACAGC TERM 2315 1989694 - 1989661 - f 100 -16.9 -4.42806 | opp_overlap 1989661 1989667, overlap 1989657 1989667 TCATCGCCAAATAAA GTAAAAGGGCTTGTC GAAA GACAGGCCCTTTTAC TTTATGGGCTGAAGA TERM 2316 1989661 - 1989694 + F 100 -19.1 -3.89346 | opp_overlap 1989657 1989661 1989667, overlap 1989667 TCATCGCCAAATAAA GTAAAAGGGCTTGTC GAAA GACAGGCCCTTTTAC TTTATGGGCTGAAGA TERM 2317 1989688 - 1989667 - f 95 -10.1 -4.72863 | opp_overlap 1989667 1989661, overlap 1989661 1989657 CCAAATAAAGTAAAA GGGCTTGTC GAAA GACAGGCCC TTTTACTTTATGGGC TERM 2318 1989667 - 1989688 + F 100 -12.3 -4.61873 | opp_overlap 1989661 1989657 1989667, overlap 1989661 CCAAATAAAGTAAAA GGGCTTGTC GAAA GACAGGCCC TTTTACTTTATGGGC TERM 2319 1989834 - 1989853 + F 93 -11.4 -4.39571 | opp_overlap 1989834 CTTACCCAATGTAAA GCCCGATC TGAT GGTCGGGC TTTTGCGTTTCTGGC TERM 2320 1989853 - 1989834 - f 73 -9.2 -3.76952 | opp_overlap 1989834 CTTACCCAATGTAAA GCCCGATC TGAT GGTCGGGC TTTTGCGTTTCTGGC TERM 2321 1990019 - 1989986 - f 85 -16.1 -2.66733 | opp_overlap 1989986 1989991, overlap 1989991 1989995 CGCGAAGGCACACTA TCCAAGTAACCGGCC CGAT GGTCGGTCACTTGGA TATATGGGTGATGCT TERM 2322 1989986 - 1990019 + F 87 -16.1 -2.92642 | opp_overlap 1989986 1989991 1989995, overlap 1989991 CGCGAAGGCACACTA TCCAAGTAACCGGCC CGAT GGTCGGTCACTTGGA TATATGGGTGATGCT TERM 2323 1990417 - 1990446 + F 70 -8.9 -3.62275 | opp_overlap 1990424, overlap 1990418 AAGTGAGGGGGCGTT TTAATTATTTGTT TTTT AACAAATAATTAG TTTGGCATGGTCACT AHA_1826 1990515 - 1991033 + | hemolysin co-regulated protein TERM 2324 1991043 - 1991069 + F 95 -10.9 -4.65747 | gap 1, overlap 1991035 1991045 GCGTAACTTGCCCAT C-AGGGGCACTG CTTG CGGTGCCCCTTG TTTTCTTAACGCTTA TERM 2325 1991045 - 1991066 + F 100 -13.7 -4.43307 | overlap 1991035 1991043 GTAACTTGCCCATCA GGGGCACTG CTTG CGGTGCCCC TTGTTTTCTTAACGC TERM 2326 1992611 - 1992630 + G 72 -4.3 -4.56775 | gap 1 CCATCCCGCGCATCG GC-CACGA GGTCA TCGTGAGC TTTTTGGAAGGGGAT AHA_1827 1991311 - 1993542 + | VgrG protein AHA_1828 1993544 - 1994863 + | hypothetical protein AHA_1829 1994873 - 1995862 + | hypothetical protein AHA_1830 1995977 - 1996522 + | hypothetical protein AHA_1831 1996643 - 1998031 + | hypothetical protein TERM 2327 1998352 - 1998364 + F 86 -4.1 -5.35365 | TAGATTTGTAGCTTA CAGTA ACG TGCTG TTTTTGTTGTGTTTT TERM 2328 1998619 - 1998640 + F 80 -11.7 -3.40867 | overlap 1998622 ATCCACCCATATCGT CAACTGTCA TTTT TGACAGTTG TTGGTTAATCCATCG AHA_1832 1998704 - 1999207 + | hypothetical protein TERM 2329 2000369 - 2000344 - g 77 -3.9 -4.84017 | overlap 2000345 2000349 AACTCGGTACAAAAA CCCAAGGTGTT CCCG AACACCAAGGA AGGCCGGGAGGCGGA AHA_1833 1999252 - 2000724 + | hypothetical protein AHA_1834 2000731 - 2001162 + | hypothetical protein TERM 2330 2001414 - 2001432 + GF 77 -7.4 -4.23892 | CCTGCGTCCCGTGCC CAGCATGA CCA TCATGCAG TTTTCGGTCATTCCG AHA_1835 2001166 - 2002932 + | hypothetical protein TERM 2331 2003592 - 2003561 - gf 77 -7.8 -4.32034 | opp_overlap 2003578 2003579 TCAGGATCAGCAAAA TCGCCTCGGCGGCG CCTG CGCCACCTTGGGGA GCGATTTTGTCATCG AHA_1836 2002896 - 2003894 + | hypothetical protein TERM 2332 2003916 - 2003904 - f 70 -3.3 -4.70626 | GAATAAGTGCAAAAA TCAGC AGC GCAGA AAATTTAACTACAGG AHA_1837 2003951 - 2005201 + | hypothetical protein AHA_1838 2005201 - 2005716 + | putative lipoprotein AHA_1839 2005719 - 2007053 + | hypothetical protein AHA_1840 2007145 - 2007855 + | hypothetical protein TERM 2333 2008302 - 2008316 + G 70 -10 -3.55761 | AAGGTCAATCGCGAG CTGCTG CGC CAGCAG TTTGACGAGTGGGTC TERM 2334 2009199 - 2009183 - g 93 -13.7 -4.11692 | CAGCCACCTGCAAAA CGCGCTG CGC CAGCGCG AGCTGGAGATCCGCC AHA_1841 2007876 - 2010518 + | ClpA/ClpB family protein TERM 2335 2010786 - 2010813 + G 70 -7.6 -4.08945 | gap 1, overlap 2010787 CCTGGGACTCCCTCT ACGGCGGTGCCCG CAT CGAGCAC-GCCGG TTTTCGCGCACTGCT AHA_1842 2010521 - 2012059 + | sigma-54 dependent transcriptional regulator TERM 2336 2012465 - 2012481 + G 76 -10.1 -3.86897 | ATGGTCAACCGAGTG CCGGCTC CCA GAGCTGG TTTATCCGGGATCAG AHA_1843 2012059 - 2012664 + | hypothetical protein TERM 2337 2012836 - 2012851 + G 74 -10.4 -3.73224 | overlap 2012834 ATCTCAATGCGGTGG CCGAGG CCTG CCTCGG TTTGCTGGAGAGTCG TERM 2338 2013654 - 2013668 + G 73 -11.4 -3.54424 | CTTTCGGCCGAGGTG GCCGAG AAA CTCGGC TTTGGGGCGGTGGCC AHA_1844 2012673 - 2014109 + | ImpA-related domain-containing protein TERM 2339 2015156 - 2015170 + G 73 -11.4 -3.54029 | opp_overlap 2015133, overlap 2015144 CGGCTCGATGCCGCC CAGCGC AAC GCGCTG TTCTCGTTCGTGCGC AHA_1845 2014151 - 2017636 + | ImcF family protein TERM 2340 2017644 - 2017662 + F 100 -16 -3.21912 | TCTATTGATCGCGTC GGGGGCAC GTA GTGCCCCC TTCCTGCGTTGGAAG TERM 2341 2018564 - 2018518 - g 95 -11.3 -4.49311 | opp_overlap 2018519, overlap 2018519 ATCAGCAGGAGAAAA CCGTGGCGGCCCAGCGTCTGG TGCAG CCGGCCGCCGAGCTGCCCCGA GCCCTCAGCTATGAC TERM 2342 2018563 - 2018519 - g 74 -12.6 -3.28864 | opp_overlap 2018519, overlap 2018518 TCAGCAGGAGAAAAC CGTGGCGGCCCAGCGTCTGG TGCAG CCGGCCGCCGAGCTGCCCCG AGCCCTCAGCTATGA AHA_1846 2017683 - 2019113 + | ImpA domain-containing protein AHA_1847 2019371 - 2019658 + | PAAR motif-containing protein AHA_1848 2019669 - 2021714 + | Rhs element Vgr family protein TERM 2343 2022797 - 2022772 - g 71 -9.7 -3.75153 | gap 1, overlap 2022774 CCTGTCGAATTCAAA GACGATGCGGTC GTT GACCGCAGCG-C AAACCCGATAGCGGT TERM 2344 2022796 - 2022774 - g 79 -13.4 -3.46068 | overlap 2022772 TGTCGAATTCAAAGA CGATGCGGTC GTT GACCGCAGCG CAAACCCGATAGCGG AHA_1849 2021749 - 2024304 + | hypothetical protein AHA_1850 2024307 - 2024711 + | hypothetical protein TERM 2345 2025135 - 2025155 + F 71 -6.1 -4.2461 | overlap 2025136 GTCGTGCTGAAGATG TCGGCGATA GAC TATCGCTGC TTTGTTAGTACAGAT TERM 2346 2026407 - 2026429 + F 88 -13.5 -3.34013 | opp_overlap 2026423 ATATAGTTACCACCT GACACCGGT CTCAA ACCGGTGTC TTGCTTACACCACTC TERM 2347 2026623 - 2026649 + F 75 -6.7 -4.49316 | gap 1, overlap 2026615 2026619 2026616 TGCTGATCGAGCAGG CGATT-TGCTCG TCAT TGAGCACAATCG TTTGTTCTTGGTGGT TERM 2348 2027841 - 2027825 - g 70 -8 -4.08216 | CGACCGGTGTTAAAA CGCATG GTCTG CATGCG GTAGTAGTCGGGGCA AHA_1854 2027356 - 2028219 + | FolD bifunctional protein TERM 2349 2028317 - 2028263 - T 76 -12.5 -2.71791 | gap 1, opp_overlap 2028279, overlap 2028279 ACTTCTCCTGTAAAT TGCAGCAATAAAAAAACCGGCAA-CC TTGC GGCTTGCCGGTTTTTTTATTTATCCA GTTCGACTCTTACAT TERM 2350 2028279 - 2028301 + T 100 -9.9 -6.02919 | gap 1, opp_overlap 2028263 2028279 GCAGCAATAAAAAAA CCGGCAA-CC TTGC GGCTTGCCGG TTTTTTTATTTATCC TERM 2351 2028301 - 2028279 - T 100 -9.9 -5.84381 | gap 1, opp_overlap 2028279, overlap 2028263 GCAGCAATAAAAAAA CCGGCAA-CC TTGC GGCTTGCCGG TTTTTTTATTTATCC cspD 2028545 - 2028327 - | cold shock domain-containing protein CspD clpS 2028774 - 2029091 + | ATP-dependent Clp protease adaptor protein ClpS TERM 2352 2029541 - 2029528 - g 76 -5.9 -4.57569 | overlap 2029529 TTACTTCCTGAAAAA GGCCG AGAT CAGCC GGCTGGACGTGGTCA TERM 2353 2031355 - 2031392 + G 70 -9.9 -3.5764 | opp_overlap 2031352 2031355 2031357 TGAGTTGATAAATGA CAGCCTCAGCTTTGACT ATCA GGTCAATGTTGAAGCTG TTTCCCACTAAGCTT clpA 2029151 - 2031403 + | ATP-dependent Clp protease, ATP-binding subunit ClpA TERM 2354 2031417 - 2031468 + T 85 -16 -2.52464 | opp_overlap 2031423 2031433, overlap 2031423 2031433 AAGCTTAACGCTGTT GGAAAACCACAAAAAACCCCAACC GGAA GGTTGGGGTTTTTTGCTGAATTCC TGGCTTAGCGAGAGC TERM 2355 2031423 - 2031463 + T 83 -15 -2.52933 | gap 1, opp_overlap 2031423 2031433, overlap 2031417 2031433 AACGCTGTTGGAAAA CCA-CAAAAAACCCCAACC GGAA GGTTGGGGTTTTTTGCTGA ATTCCTGGCTTAGCG TERM 2356 2031462 - 2031423 - T 100 -18.8 -4.08064 | opp_overlap 2031423 2031417 2031433, overlap 2031433 AACGCTGTTGGAAAA CCACAAAAAACCCCAACC GGAA GGTTGGGGTTTTTTGCTG AATTCCTGGCTTAGC TERM 2357 2031433 - 2031452 + T 100 -13.6 -5.18357 | opp_overlap 2031423 2031433, overlap 2031423 2031417 GAAAACCACAAAAAA CCCCAACC GGAA GGTTGGGG TTTTTTGCTGAATTC TERM 2358 2031452 - 2031433 - T 100 -13.6 -5.4588 | opp_overlap 2031433 2031423 2031417, overlap 2031423 GAAAACCACAAAAAA CCCCAACC GGAA GGTTGGGG TTTTTTGCTGAATTC infA 2031712 - 2031473 - | translation initiation factor IF-1 AHA_1859 2032477 - 2031761 - | arginyl-tRNA-protein transferase aat 2033181 - 2032474 - | leucyl/phenylalanyl-tRNA--protein transferase AHA_1861 2033201 - 2033671 + | putative surface antigen AHA_1862 2035029 - 2033782 - | response regulator protein TERM 2359 2035050 - 2035069 + r 100 -13.6 -4.58076 | opp_overlap 2035050 TCCTTAAAGTAAAAA GGCATGCC TCGC GGCATGCC TTTTATATCCCTTGT TERM 2360 2035069 - 2035050 - R 100 -13.6 -4.98531 | opp_overlap 2035050 TCCTTAAAGTAAAAA GGCATGCC TCGC GGCATGCC TTTTATATCCCTTGT trxB 2036268 - 2035087 - | thioredoxin-disulfide reductase TERM 2361 2036200 - 2036165 - G 86 -11.8 -4.13343 | opp_overlap 2036195 2036196, overlap 2036155 2036168 2036193 AGAAAGGGCTGAAAA CATGCCCTGTCGCGGA AGGC TCCACAACCGGGCGTG GCACGCATTCCTATT TERM 2362 2036730 - 2036752 + H 100 -4.8 -5.85425 | GTACACTGGCCACAG CCATGCCTAC GCG GTATTCATGG TTTTTTATTTCTTTA lrp 2036934 - 2037425 + | leucine-responsive transcriptional regulator TERM 2363 2037510 - 2037466 - f 72 -12.2 -2.59431 | opp_overlap 2037475 2037479, overlap 2037479 CCTTGCGACAAGTCA CGACATTCAGAAACGAGCGG CCGGT CCGCTCGTTTCTTCTTATCG AGTCGGTTGTGAATA TERM 2364 2037475 - 2037501 + F 100 -16.7 -3.80733 | opp_overlap 2037466 2037479, overlap 2037479 AAGTCACGACATTCA GAAACGAGCGG CCGGT CCGCTCGTTTC TTCTTATCGAGTCGG TERM 2365 2037479 - 2037497 + F 95 -11.7 -4.51812 | opp_overlap 2037466 2037479, overlap 2037475 CACGACATTCAGAAA CGAGCGG CCGGT CCGCTCG TTTCTTCTTATCGAG TERM 2366 2037497 - 2037479 - f 90 -11.7 -3.95787 | opp_overlap 2037479 2037475, overlap 2037466 CACGACATTCAGAAA CGAGCGG CCGGT CCGCTCG TTTCTTCTTATCGAG TERM 2367 2037810 - 2037794 - g 76 -5.7 -4.62336 | AGGGGAGGTGAAAAA CCTCGCC GGC AGCGCGG GGGCCTGGCTCGCCG TERM 2368 2040099 - 2040077 - g 71 -6.2 -4.24948 | CGAGCAGATGGAAAA CCAGGGCA TCGTCAG CGCCCCGG GCGGCAATGGTCAGC AHA_1865 2037627 - 2040149 + | FtsK/SpoIIIE family protein TERM 2369 2040171 - 2040195 + F 100 -15 -4.38712 | CCCCTCTATCATCCT GGCCATGCCC CCTGC GGGCGTGGCC TTTTATCGAGATAGC lolA 2040227 - 2040835 + | outer membrane lipoprotein carrier protein LolA TERM 2370 2042273 - 2042245 - g 74 -12.5 -3.28712 | GCGTGGGCTGGAGAA GCAGATAGCCCAG AAG CTCGACTATCTGC ATGAGCTGGATCGGC AHA_1867 2040959 - 2042314 + | recombination factor protein RarA serS 2042654 - 2043949 + | seryl-tRNA synthetase TERM 2371 2043992 - 2043967 - f 95 -17.7 -2.63596 | opp_overlap 2043967 2043970, overlap 2043970 GCTCATTGCAGACGA CAACGCCATGG CATG CCATGGCGTTG TGCATTATGGCGTCG TERM 2372 2043967 - 2043992 + F 95 -17.7 -2.60079 | opp_overlap 2043967 2043970, overlap 2043970 GCTCATTGCAGACGA CAACGCCATGG CATG CCATGGCGTTG TGCATTATGGCGTCG TERM 2373 2043989 - 2043970 - f 89 -13.6 -3.47078 | opp_overlap 2043967 2043970, overlap 2043967 CATTGCAGACGACAA CGCCATGG CATG CCATGGCG TTGTGCATTATGGCG TERM 2374 2043970 - 2043989 + F 88 -13.6 -3.45054 | opp_overlap 2043970 2043967, overlap 2043967 CATTGCAGACGACAA CGCCATGG CATG CCATGGCG TTGTGCATTATGGCG TERM 2375 2044161 - 2044173 + G 75 -3.3 -4.95758 | overlap 2044162 TTGATTACGCCATCA TCGGC ATC GTCGG TTTTTCTGCTCTCAT TERM 2376 2044458 - 2044484 + G 100 -15.2 -5.53991 | GTTTTGGCGCTATTC GCGGGGTACTGA TCG TCAGTGCCCTGC TTTTTTTCATGGATA cvpA 2044136 - 2044624 + | CvpA family protein TERM 2377 2045038 - 2045014 - g 82 -14.3 -3.25823 | overlap 2045017 CCGTCGCCACATCAA CACCACCTCGG ACT CCGAGGTGCTG CTGAACGTGCTGGCG TERM 2378 2045035 - 2045017 - g 74 -14.6 -2.51547 | overlap 2045014 TCGCCACATCAACAC CACCTCGG ACT CCGAGGTG CTGCTGAACGTGCTG purF 2044646 - 2046166 + | amidophosphoribosyltransferase TERM 2379 2046198 - 2046215 + F 95 -12.7 -4.09628 | opp_overlap 2046198 GGTGTTGCAACGAGA TGGGGGC CCAG GCCCCCA TTGTTGTTTCCGCTC TERM 2380 2046215 - 2046198 - f 79 -12.7 -2.90075 | opp_overlap 2046198 GGTGTTGCAACGAGA TGGGGGC CCAG GCCCCCA TTGTTGTTTCCGCTC AHA_1871 2046352 - 2047110 + | tRNA-(ms[2]io[6]A)-hydroxylase TERM 2381 2047178 - 2047197 + T 100 -10.7 -5.82281 | ATTTTTGAGCGCAAT TCCCGGC CCCTGA GCCGGGA TTTTTTTGTCTCTTT sapF 2048050 - 2047265 - | peptide ABC transporter, ATP-binding protein SapF sapD 2049104 - 2048106 - | peptide ABC transporter, ATP-binding protein SapD sapC 2049997 - 2049104 - | peptide ABC transporter, permease protein SapC sapB 2050992 - 2050033 - | peptide ABC transporter, permease protein SapB sapA 2052560 - 2050995 - | peptide ABC transporter, periplasmic peptide-binding protein SapA TERM 2382 2052594 - 2052608 + r 74 -2.8 -4.84017 | overlap 2052584 GGGTTTGAGCATTCT CATTGT CGA ACCATG TTTTTATACGAAGTT AHA_1877 2053715 - 2052681 - | PSP operon transcriptional activator TERM 2383 2053412 - 2053445 + g 76 -13.1 -3.53091 | gap 1, opp_overlap 2053407 2053406 2053404 CGAGAAACAGGGTGC CGCCGTC-GGCCCGCT CGA AGCGGCCCTGGTGGCG TTTGGCGGCGCCGGT AHA_1878 2053911 - 2054591 + | phage shock protein A pspB 2054595 - 2054831 + | phage shock protein B AHA_1880 2054860 - 2055342 + | phage shock protein C TERM 2384 2055365 - 2055380 + F 72 -11.8 -2.83403 | overlap 2055364 CGGCGCGATGGCCCC GCCGGC GCGG GCCGGC CTTTGATGGCGGGCA TERM 2385 2056282 - 2056294 + G 75 -3.3 -4.82901 | opp_overlap 2056277 2056280, overlap 2056278 2056283 AGCAGTACAAGCAGC ACCTG GTG CAGGG TTTTTATGAGCAGCA AHA_1881 2055450 - 2056880 + | amino acid regulated cytosolic protein TERM 2386 2056980 - 2056965 - g 78 -6.8 -4.59027 | gap 1, overlap 2056967 AACGATCAGATAAAA GC-GCGG CCA CCGCTGC AGGGCAAGGTGATCC AHA_1882 2056947 - 2057972 + | hypothetical protein TERM 2387 2058027 - 2058050 + F 100 -18.2 -5.00616 | opp_overlap 2058021 TTACAATTATCCGCC GCAGCCGACC CTTG GGTCGGCTGC TTTTTTGGGGGGCAA phhA 2058144 - 2058938 + | phenylalanine 4-monooxygenase AHA_1884 2058993 - 2059331 + | pterin-4-alpha-carbinolamine dehydratase AHA_1885 2059351 - 2059452 + | pterin-4-alpha-carbinolamine dehydratase TERM 2388 2059467 - 2059502 + F 100 -18.2 -4.85599 | opp_overlap 2059464 2059488, overlap 2059468 AACGTCTATAGATGG CGCGGGCCTGCCCGGT GAAA ACGGGGCGGGCCCGCA TTTTTATGGGCTGGC TERM 2389 2059468 - 2059501 + F 100 -21.7 -3.50877 | opp_overlap 2059464 2059488, overlap 2059467 ACGTCTATAGATGGC GCGGGCCTGCCCGGT GAAA ACGGGGCGGGCCCGC ATTTTTATGGGCTGG tyrR 2059587 - 2061134 + | transcriptional regulatory protein TyrR AHA_1887 2061312 - 2061881 + | hypothetical protein AHA_1888 2061878 - 2063146 + | inner membrane protein YfiN AHA_1889 2063149 - 2063637 + | OmpA family protein TERM 2390 2063660 - 2063677 + T 100 -12.7 -5.28176 | opp_overlap 2063660 GTGTAGATAAAAAAA GAGCGCC TGAT GGCGCTC TTTTTTGTGGCTCGC TERM 2391 2063677 - 2063660 - T 100 -12.7 -5.71712 | opp_overlap 2063660 GTGTAGATAAAAAAA GAGCGCC TGAT GGCGCTC TTTTTTGTGGCTCGC AHA_1890 2064474 - 2063695 - | TerC protein AHA_1891 2064548 - 2065663 + | ATP-NAD kinase AHA_1892 2065774 - 2066052 + | hypothetical protein TERM 2392 2066215 - 2066180 - g 72 -7.5 -4.16842 | opp_overlap 2066180 CGTATTGCCAATAAA CTGCCGCTCGAAATG CTCTAC CAATGGGAGCGGCAG TGTCCTGACCGAGTC TERM 2393 2067013 - 2066996 - g 76 -7.7 -4.30719 | CTGCCCCAGAAGAAA CTCGAGC TGCT GCTCAAG ATCCCGTTCGTGTCG TERM 2394 2067721 - 2067706 - g 85 -10.4 -4.28254 | CTGGAACATCGAAAA CGGGGT GCTC ACCCCG ACCATGAAGATCCGC AHA_1893 2066150 - 2067814 + | long-chain acyl-CoA synthetase TERM 2395 2067886 - 2067846 - T 100 -24.3 -2.73875 | opp_overlap 2067851 2067854 2067857, overlap 2067851 TGCTGCTGAACACCA CAAAACAACAAGGGGAGCC ACT GGCTCCCCTTGTTGTTTCA GGCAACGGCAGGTCA TERM 2396 2067851 - 2067881 + T 100 -24.2 -3.53012 | opp_overlap 2067846 2067851, overlap 2067854 2067857 CTGAACACCACAAAA CAACAAGGGGAGCC ACT GGCTCCCCTTGTTG TTTCAGGCAACGGCA TERM 2397 2067881 - 2067851 - T 100 -24.2 -4.55023 | opp_overlap 2067851 2067854 2067857, overlap 2067846 CTGAACACCACAAAA CAACAAGGGGAGCC ACT GG