TransTermHP v2.07 (built on Jan 21 2009) 25 bins; sample size is 20000000 --pval-conf=/fs/szasmg2/carlk/TTupdate2/expterm.dat --gc=-2.3 --au=-0.9 --gu=1.3 --mm=3.5 --gap=6 --max-len=59 --min-stem=4 --max-loop=13 --min-loop=3 --uwin-length=6 --uwin-require=3 --max-hp-score=-2 --max-tail-score=-2.5 --loop-penalty=1,2,3,4,5,6,7,8,9,10,11 --start-cut=0 --end-cut=25 Genes: 0.400552 %AT, 4870131 nt, 52957 terms. Intergenic: 0.464197 %AT, H2T: 496576 nt, 5073 terms; T2T: 141408 nt, 3393 terms; H2H: 212953 nt, 3796 terms. Each terminator entry starts in column 3 and is of the form: term # start - end +/- regionconf hp tail | notes Followed by the sequence of the 5' tail, 5' stem, loop, 3' stem, and 3' tail. Genes are interspersed, and start the first column. SEQUENCE gi|159184118|ref|NC_003062.2| Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence (length 2841580) TERM 1 277 - 295 + G 80 -11.6 -3.767 | TCTGATGTCGGCCGG CCGCGCCG TCT CGGCGCAG TTTCATACATCCATG Atu0001 203 - 1024 + | hypothetical protein TERM 2 1346 - 1328 - g 93 -6.6 -5.1925 | opp_overlap 1332 1342, overlap 1319 TCACAAGCCAAAAAA CATGGCGG AAG CCGCGACG CATCTGCTGTCGTTG maf 1056 - 1655 + | Maf-like protein aroE 1648 - 2508 + | shikimate 5-dehydrogenase TERM 3 2580 - 2551 - g 81 -7.7 -4.66833 | opp_overlap 2550 2543 2542 2539 TTGGAATGGGAAAAA CCACGACGGCGAA GCTC TTCGCCGAAGAGG GTGTTCCGGTTCTCG coaE 2508 - 3089 + | dephospho-CoA kinase dnaQ 3110 - 3808 + | DNA polymerase III subunit epsilon TERM 4 3846 - 3874 + T 100 -11.8 -4.54047 | opp_overlap 3851, overlap 3851 GAAAATCGGCTAAAT AAAAACCCGGGT GAAGA ACCCGGGTTTTG TTTTGTCTGCAATGA TERM 5 3851 - 3869 + T 100 -11.7 -5.23292 | opp_overlap 3851, overlap 3846 TCGGCTAAATAAAAA CCCGGGT GAAGA ACCCGGG TTTTGTTTTGTCTGC TERM 6 3869 - 3851 - T 100 -11.7 -5.27335 | opp_overlap 3851 3846 TCGGCTAAATAAAAA CCCGGGT GAAGA ACCCGGG TTTTGTTTTGTCTGC secB 4389 - 3907 - | preprotein translocase subunit SecB fxsA 5029 - 4493 - | FxsA TERM 7 4723 - 4709 - G 91 -8.5 -4.82901 | GGCTTTCCAGAAAAA CCGGC GAATG GCCGG CGACAGAAGCAGAAG TERM 8 4818 - 4856 + g 70 -10.1 -3.54424 | opp_overlap 4813 CCGTTAACGAGCTCA TCCGCCGGCTGCGCGCC AGTGC GGCCCGCAGCCTGAAGA TTTCGCACCATGCCG Atu0008 5215 - 5868 + | hypothetical protein TERM 9 6142 - 6157 + G 85 -6.8 -4.82901 | opp_overlap 6142 CGGCTCAGGGCAAAA GCGGTT TCGT GACCGC TTTTTATGAGCCCGA mltA 5865 - 6977 + | membrane-bound lytic murein transglycosylase TERM 10 7208 - 7192 - g 78 -4.3 -4.85599 | overlap 7200 GTCACCGGATAAAAA GCCGAAG ACC CATCAGC CGATGGAAAAGCCGG Atu0010 6974 - 7543 + | hypothetical protein Atu0011 7540 - 7905 + | transcriptional regulator TERM 11 9265 - 9301 + G 70 -10.3 -3.48276 | gap 2, opp_overlap 9274 CCGCCCGCAAGGCTC GCGA-ATTGA-CGCGCC GCAAA GGCGCGCTCGATATCGC TTCTCTGCCCGGCAA gyrB 8064 - 10499 + | DNA gyrase subunit B TERM 12 10588 - 10542 - T 100 -19.6 -4.55798 | opp_overlap 10547 10552, overlap 10547 10552 CACGTGAAACGAAAA TTTAACAAAAGGCCCGGCGG TGAATTT CCGCCGGGCCTTTTGTTTGA TGGTGTCGGGCGTGA TERM 13 10583 - 10547 - T 100 -23.9 -3.43315 | opp_overlap 10547 10552, overlap 10542 10552 GAAACGAAAATTTAA CAAAAGGCCCGGCGG TGAATTT CCGCCGGGCCTTTTG TTTGATGGTGTCGGG TERM 14 10547 - 10583 + T 100 -23.9 -3.81951 | opp_overlap 10547 10542 10552, overlap 10552 GAAACGAAAATTTAA CAAAAGGCCCGGCGG TGAATTT CCGCCGGGCCTTTTG TTTGATGGTGTCGGG TERM 15 10578 - 10552 - T 100 -18 -4.77719 | opp_overlap 10547 10552, overlap 10547 10542 GAAAATTTAACAAAA GGCCCGGCGG TGAATTT CCGCCGGGCC TTTTGTTTGATGGTG TERM 16 10552 - 10578 + T 100 -18 -4.95484 | opp_overlap 10552 10547 10542, overlap 10547 GAAAATTTAACAAAA GGCCCGGCGG TGAATTT CCGCCGGGCC TTTTGTTTGATGGTG Atu0013 11206 - 10604 - | NAD(P)H-flavin oxidoreductase hpcE 11335 - 12177 + | 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase TERM 17 12201 - 12236 + F 100 -13.2 -4.38712 | opp_overlap 12202 12203 12206, overlap 12203 12206 AGGCATTCAACGAAA AGTGAGGCGCCGGCGG GAAA CCGCTGGCGCCTTAAA TTTTGTGCACCTGCG TERM 18 12235 - 12202 - f 95 -12.3 -4.43477 | opp_overlap 12201 12203 12206, overlap 12203 12206 GGCATTCAACGAAAA GTGAGGCGCCGGCGG GAAA CCGCTGGCGCCTTAA ATTTTGTGCACCTGC TERM 19 12203 - 12234 + F 100 -20.2 -2.53422 | opp_overlap 12202 12203 12206, overlap 12201 12206 GCATTCAACGAAAAG TGAGGCGCCGGCGG GAAA CCGCTGGCGCCTTA AATTTTGTGCACCTG TERM 20 12234 - 12203 - f 100 -15.8 -3.25604 | opp_overlap 12203 12201 12206, overlap 12202 12206 GCATTCAACGAAAAG TGAGGCGCCGGCGG GAAA CCGCTGGCGCCTTA AATTTTGTGCACCTG TERM 21 12206 - 12231 + F 100 -19.7 -3.41587 | opp_overlap 12203 12202 12206, overlap 12203 12201 TTCAACGAAAAGTGA GGCGCCGGCGG GAAA CCGCTGGCGCC TTAAATTTTGTGCAC TERM 22 12231 - 12206 - f 91 -17.5 -2.80479 | opp_overlap 12206 12203 12201, overlap 12203 12202 TTCAACGAAAAGTGA GGCGCCGGCGG GAAA CCGCTGGCGCC TTAAATTTTGTGCAC depA 12339 - 13535 + | intracellular PHB depolymerase Atu0016 13605 - 14372 + | hypothetical protein TERM 23 14534 - 14557 + G 85 -3.7 -5.34857 | opp_overlap 14511 14509 14518, overlap 14528 GCTGGAGCGCGTCGT CCGGCGCGG TGCGTC CCATGTCGG TTTTATTTTCTTTGA trpF 14475 - 15137 + | N-(5'-phosphoribosyl)anthranilate isomerase trpB 15139 - 16359 + | tryptophan synthase subunit beta trpA 16364 - 17203 + | tryptophan synthase subunit alpha accD 17231 - 18127 + | acetyl-CoA carboxylase subunit beta TERM 24 18239 - 18227 - f 100 -9.1 -4.91429 | AAATGGCAAACAAAA CGCCT GAA AGGCG AACGGAAGACATGAC TERM 25 18927 - 18944 + G 74 -6.3 -4.57569 | overlap 18929 GCTTGGTTGCCTGGT TTCTGTC TACG GACAGGA TTTTTCCGCCCATGA folC 18250 - 19593 + | folylpolyglutamate synthase TERM 26 19598 - 19617 + T 100 -12.8 -5.28481 | opp_overlap 19598 TTCCCCAATAAAAAA GCCCGGCG ATCA TGCCGGGC TTTTTTCATTCCATA TERM 27 19617 - 19598 - T 100 -12.1 -5.4505 | opp_overlap 19598 TTCCCCAATAAAAAA GCCCGGC GATCAT GCCGGGC TTTTTTCATTCCATA trxA 19961 - 19641 - | thioredoxin uvrD 23596 - 20039 - | ATP-dependant DNA helicase TERM 28 20208 - 20234 + g 77 -7.9 -4.29304 | opp_overlap 20201 20206, overlap 20193 20209 TGCGAGAAGGGAAGC TCGCGTGCTTC GCGCG GCGGCACGCGG TTTGTCTTGTAATCG TERM 29 20528 - 20574 + g 90 -5.9 -5.24129 | gap 2, overlap 20529 CAGGGCCTGCAGCAT TCGATG-CACCAG-CTTGCCC CTTTGCA GGGCAAGGCTGGAGGCCTCGG TTTTTTCTCCGAACA TERM 30 21049 - 21033 - G 73 -4.3 -4.63928 | overlap 21034 21035 AGATGATTGGAAAAA CCGCTGC CGG GCAGCCA GACCGGAAAGGCATC TERM 31 21272 - 21258 - G 70 -3.4 -4.58076 | opp_overlap 21267, overlap 21267 AGAACCGAGAGAAAA GCCTGA AGA CCGGGC AGGCCGGTTCTTTCG TERM 32 21397 - 21356 - G 71 -6.6 -4.17958 | overlap 21345 AAGACGGCCAAGAAA TTTTTTGCGGCCGTCATG CAGGGT CAGAACCGCCGCGAAAAA ATCATGCACCGTGGC TERM 33 21731 - 21751 + g 82 -8.9 -4.36914 | CAACTCGCGGGTCAG CGCGTTGAC GAA GGCAGCGCG TTTTCTGACAAGCAC TERM 34 22018 - 22034 + g 73 -4.4 -4.64766 | gap 1, overlap 22000 CGGGCTCATTGTCGG CGCTGAG GCCG CTC-GCG TTTTTCGGGTCTGAA Atu0024 26771 - 23586 - | hypothetical protein TERM 35 24880 - 24866 - G 74 -7.1 -4.4261 | opp_overlap 24875 CGCCGAAGATGAAAA TGCGC GGATG GCGCA TGGAACGCGGCTTGA TERM 36 25228 - 25252 + g 74 -12.8 -3.22475 | overlap 25224 CTTCCCTCCGGCAGC GCCACCCGCC AGGCG GGCGGGTGCC TGTTGTCACGCTGGG TERM 37 25397 - 25385 - G 73 -10.5 -3.60475 | AAGCGTCACCGGAAA GCCCG AAG CGGGC GAGGGGATGCTTCAG TERM 38 25735 - 25722 - G 70 -3.7 -4.65895 | overlap 25723 GGCTTCATCGAAAAA TCCGG GATC CCGGC CTTCGCGCCAGCCGT TERM 39 26746 - 26779 + g 77 -3.8 -5.00642 | GCGATCGTCAGGACG CGCTTTGCGTGGTG GGTGAG CGTCATGCGAAACG TTTTTCTCTGAATTG Atu0025 27505 - 26768 - | hypothetical protein TERM 40 26862 - 26881 + g 73 -4.9 -4.65895 | CAGTGGCCATCCAGC GACAGGC CGAAAA GCCGGTC TTTTTCAATGGCGCG Atu0026 29031 - 27520 - | hypothetical protein TERM 41 27743 - 27753 + g 70 -4.6 -4.55023 | GCGGCCTCATCGAAA GCGG GCG TCGC TTTTCTGCTGTTGAG TERM 42 28537 - 28514 - G 71 -8.8 -3.77196 | gap 1, opp_overlap 28514 TCACCACTCAGGAAA CGGC-GAGTCG CAT CGCCTCTGCCG TTTTTCGCCAGGAAT TERM 43 28514 - 28537 + g 84 -8.8 -4.56775 | gap 1, opp_overlap 28514 TCACCACTCAGGAAA CGGC-GAGTCG CAT CGCCTCTGCCG TTTTTCGCCAGGAAT Atu0027 31673 - 29028 - | two component sensor kinase TERM 44 30487 - 30470 - G 79 -7.7 -4.56597 | opp_overlap 30483 GCCGGCCGTCAAAAA TGGCAAC GGGC GTCGCCA GATGATCGAGCGTTT Atu0028 31837 - 31670 - | hypothetical protein TERM 45 31843 - 31812 - G 100 -21 -5.02074 | opp_overlap 31800 31809 31808 31806, overlap 31800 GGAGCGCGCAAAAAA GATGCCGCGCGCTT TGTC AAGCGCACGGCATC TAGATATTGTGTAAT ahcY 33282 - 31882 - | S-adenosyl-L-homocysteine hydrolase ptsH 33686 - 33411 - | phosphocarrier protein HPr TERM 46 33634 - 33648 + g 71 -9.2 -3.75024 | opp_overlap 33598, overlap 33631 TTCGCGGATGCCCGA GCGTGG AGA CCGCGC TTGTTGATGATGGGC Atu0031 34099 - 33698 - | PTS system, IIA component TERM 47 33832 - 33854 + g 76 -9.8 -3.73647 | TGGGAAGATTGACCC CGGCGATGAC TTC GACATTGCCG TTGTTCATGACTGAG TERM 48 34200 - 34190 - R 74 -6.8 -4.30576 | TCTTGATGAGGAAAA TGCG AAT CGCA AGCCTAAAATCGCCT Atu0032 34689 - 34225 - | hypothetical protein TERM 49 34543 - 34524 - G 74 -6.4 -4.39166 | overlap 34525 CGCGATACACGAAAA TCTGATCG TCCG CGATCAGG GCCGCCGGCAATCCG chvG 36469 - 34679 - | two component sensor kinase TERM 50 35102 - 35114 + g 80 -3.3 -5.15167 | GTCGGCGACATAATC GATCG CCA CGCTC TTTTTCTTGGTGCTG chvI 37250 - 36525 - | two component response regulator TERM 51 37755 - 37725 - g 83 -16.8 -2.55074 | GCGAAGCCGAACTGA CCATCGACGGCGCG CTG CGCGCCGTCACCGG CCAGCATACGGGCCG pckA 37589 - 39199 + | phosphoenolpyruvate carboxykinase TERM 52 39225 - 39249 + F 100 -13.6 -4.60255 | opp_overlap 39229, overlap 39229 TTTCGTGAGGAGGAG GGAACCCGGC CCAGT GCCGGGTTTC TTTTTGCCGGGTTCT TERM 53 39229 - 39245 + F 100 -10.8 -4.85782 | opp_overlap 39229, overlap 39225 GTGAGGAGGAGGGAA CCCGGC CCAGT GCCGGG TTTCTTTTTGCCGGG Atu0036 39327 - 39761 + | hypothetical protein panK 40749 - 39781 - | pantothenate kinase TERM 54 40273 - 40262 - G 77 -3.6 -4.87133 | overlap 40263 40264 ATCGCCGAAAGAAAA CGCA GCAG CGCG CCGATATCGTAGCTT TERM 55 40786 - 40800 + r 70 -7 -4.07568 | CTCAATCTTCATGGT GTCGGC CTC GCCGCC TTTTCCGCAAGGCCG hisE 41102 - 40779 - | phosphoribosyl-ATP pyrophosphatase hisF 41894 - 41118 - | imidazole glycerol phosphate synthase subunit HisF hisA 42634 - 41891 - | 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase TERM 56 42396 - 42410 + g 72 -2.7 -4.78764 | opp_overlap 42393 GTGCGAATACCACCG CCCAG CTGCA CCGGG TTTTTCGTGGATTTC hisH 43286 - 42636 - | imidazole glycerol phosphate synthase subunit HisH TERM 57 42675 - 42688 + g 80 -3.1 -5.03314 | gap 1, opp_overlap 42668 GGAAATCAGGGCAAG GCCGAG CGT CT-GGC TTTTTTCCGGGTGGA TERM 58 42779 - 42739 - G 93 -14.8 -3.72576 | gap 1, opp_overlap 42719 42732 TCGCGGCCGACGAAA GCCGTCATCG-CGCCACCA TAAT TGGTGGTGGCGATGACGTC AGTCGAGTGCTTGGC Atu8115 43782 - 43288 - | hypothetical protein TERM 59 43333 - 43318 - G 85 -9 -4.68655 | overlap 43322 CAAGTCGAAAAGAAA CGATCC GGCG GGATCG TCGACGAAGTTTTTG TERM 60 43541 - 43520 - G 70 -4.3 -4.46212 | TGCCGGACGAGAAAA TCACGCCCC TCCA GCGCCGTGA TAAGCCCGATGGCGA hisB 44401 - 43805 - | imidazoleglycerol-phosphate dehydratase TERM 61 44309 - 44294 - G 76 -5.4 -4.59109 | opp_overlap 44286, overlap 44296 CATATGGTCGAAAAA TCCCAC GCCG GTGGAA ATTTTCGATTTGCCG TERM 62 44506 - 44492 - H 70 -7 -4.08767 | GTGACGCGCCGAAAA CGGTGC GTC GCCCCG AAGATTGCAATCGTG hslV 44644 - 45126 + | ATP-dependent protease peptidase subunit TERM 63 45297 - 45286 - g 71 -7.2 -4.21908 | overlap 45287 CAGCATGATGCAAAA CGCG CGGT CGCG ATTGCACTGCGCAAC TERM 64 46497 - 46471 - g 89 -6.5 -5.09173 | opp_overlap 46489 GAATACGTCAAAAAA CATGTCGGCGA TCTTG CCGCCGATACG GATTTGTCGCGTTAC hslU 45214 - 46521 + | ATP-dependent protease ATP-binding subunit TERM 65 46569 - 46545 - f 100 -14.3 -4.12296 | opp_overlap 46545 GGGACAACGAAAGAA GAGTGCGGCCA TAT TTGCCGCACTC TTTTATTTTATCTGC TERM 66 46545 - 46569 + F 100 -14.3 -5.23292 | opp_overlap 46545 GGGACAACGAAAGAA GAGTGCGGCCA TAT TTGCCGCACTC TTTTATTTTATCTGC TERM 67 46750 - 46764 + G 76 -9.2 -4.02742 | overlap 46751 46761 46762 CATTTGTCGTGGCTC TGGCGG TTT CCGCCG TTTCGTCTTCTTATG Atu0046 46716 - 47681 + | hypothetical protein TERM 68 47899 - 47911 + G 76 -5.5 -4.58663 | overlap 47883 GTCTGGACAGCGAGA CCTTC TTT GAGGG TTTTTCGGCCATCGT glcB 47736 - 49970 + | malate synthase G TERM 69 50104 - 50127 + T 100 -14.6 -5.16841 | gap 1, opp_overlap 50104 TCCATAAACAAAAAA GCCGCCG-GGA AAA TCCTCGGCGGC TTTTTCTTGATCTGA TERM 70 50127 - 50104 - T 100 -14.6 -5.72622 | gap 1, opp_overlap 50104 TCCATAAACAAAAAA GCCGCCG-GGA AAA TCCTCGGCGGC TTTTTCTTGATCTGA Atu0048 50864 - 50151 - | hypothetical protein Atu0049 51048 - 51533 + | hypothetical protein actR 52181 - 51594 - | two component response regulator actS 53562 - 52255 - | two component sensor kinase hrpB 56078 - 53592 - | helicase TERM 71 54717 - 54735 + g 89 -10.2 -4.56775 | overlap 54719 CTGTTCCGTCAGCAT GACGGCGA GCA TCGCCGCC TTTTTCCCGGCACCT TERM 72 55432 - 55445 + g 72 -2.3 -4.72986 | overlap 55433 GCGTGGGCCTCGGTA ATCGC CTTG GCGAC TTTTTCATCGACATG TERM 73 56201 - 56167 - R 83 -12.1 -3.72141 | gap 1, opp_overlap 56167 56169 ACAGCCATATGTAAA GGCCGGGCAAATGGCC TGCC GGCCAAT-GCCCGGTC TCTTCAGGTCATTTG TERM 74 56167 - 56201 + r 91 -14.3 -3.0873 | gap 1, opp_overlap 56167, overlap 56169 ACAGCCATATGTAAA GGCCGGGCAAATGGCC TGCC GGCCAAT-GCCCGGTC TCTTCAGGTCATTTG TERM 75 56169 - 56199 + r 84 -13.3 -3.09557 | gap 1, opp_overlap 56167, overlap 56167 AGCCATATGTAAAGG CCGGGCAAATGGCC TGCC GGCCAAT-GCCCGG TCTCTTCAGGTCATT TERM 76 56275 - 56261 - R 74 -10 -3.63744 | overlap 56259 CGCGTCGCGAAAACA GGCAGA GAA TCTGCC CCTCCCAGTGTCCCT TERM 77 57312 - 57292 - R 71 -9.7 -3.5594 | opp_overlap 57291 57288, overlap 57283 AAGTCAGGGGTGAAA TCCCGCAGC TCA ACTGCGGAA CTGCCTTTGATACTG TERM 78 58756 - 58786 + r 100 -16.2 -3.54653 | opp_overlap 58729 58765, overlap 58759 TTCGATCCCGCTCAG CTCCACCAATCGCG GAA CGCGATTGGTGTGG TTATGTGCTGACGCT TERM 79 58759 - 58783 + r 100 -18.7 -2.9062 | opp_overlap 58765, overlap 58756 GATCCCGCTCAGCTC CACCAATCGCG GAA CGCGATTGGTG TGGTTATGTGCTGAC TERM 80 59162 - 59172 + r 84 -3.2 -5.29445 | GTAGGAAGGATCGCT TGTC CGA GGCA TTTTTGTTGTTGGAG Atu0056 59627 - 59238 - | hypothetical protein TERM 81 59658 - 59706 + H 93 -13.4 -3.81447 | gap 1, opp_overlap 59658 GCAACCCACCTTAAA TGCTTGGAAAATCCAGTCTGTTT TAAC GAACGGCCTGGGTTT-CCAAGCA TTATTATAAGGTATC TERM 82 60875 - 60859 - H 77 -8 -4.08546 | overlap 60863 ATGAGTAACGATAAA GGGAGT GAGAG ACTCCC TCGCCGAAAGACCAA TERM 83 61263 - 61250 - H 74 -4.5 -4.7254 | ACTGTTTATCAAAAA CACAG GGCT CTGCG AAGTAGCAATACGAC Atu0058 62235 - 62492 + | hypothetical protein TERM 84 62782 - 62800 + F 86 -11.7 -3.8901 | opp_overlap 62781 62782 CCAGCCGACACCAAG GGCCGCT ATCCA AGCGGCC TTTCGTCGTTTAAGG TERM 85 62800 - 62782 - f 72 -11.7 -2.55999 | opp_overlap 62782, overlap 62781 CCAGCCGACACCAAG GGCCGCT ATCCA AGCGGCC TTTCGTCGTTTAAGG TERM 86 62896 - 62868 - f 89 -13.4 -3.53012 | TGTGCGCCCCTTAAA GGAGATAAATTG TGCCG CAATTTATCTCC GGCAAAGATCCGTCG TERM 87 62930 - 62905 - f 70 -9.7 -3.34715 | overlap 62903 62924 TATCTCCGGCAAAGA TCCGTCGTCGC TAAA GCAACGACGTA ACCGCGACATTCGGC TERM 88 62961 - 62932 - f 81 -12.9 -3.15252 | gap 1, overlap 62924 AAAGCAACGACGTAA CCGCGACATTCGGC CTT GCCGAATG-CGCTG GACGCGGGGTGGAGC TERM 89 63084 - 63063 - f 88 -10.1 -4.44284 | opp_overlap 63063, overlap 63058 AACCCAATATCAAAA GGCTTCGAG GAAA CTCGGAGCC TTTTTGCGTTCCTCC TERM 90 63063 - 63084 + F 100 -12.3 -4.7629 | opp_overlap 63058 63063 AACCCAATATCAAAA GGCTTCGAG GAAA CTCGGAGCC TTTTTGCGTTCCTCC TERM 91 63150 - 63125 - f 73 -6.1 -4.38154 | gap 1, overlap 63126 ACAGCCCTCAGAAAA GCCATCTCCGGC ATT GCCAG-GATGCC TGAAATGGACATGAT TERM 92 64154 - 64142 - g 76 -10.5 -3.80573 | CCTATTATCAGGAAA CCGGC CGG GCCGG GCGCGATGGCCTGCC recQ 63196 - 65004 + | ATP-dependent DNA helicase frcR 66286 - 65054 - | ROK family transcriptional regulator TERM 93 65793 - 65808 + g 83 -4.6 -5.03314 | overlap 65794 TCGAACGGGGCGGCG ATGCCG ACAC CGGCAA TTTTTTGCCGCTCGA frcB 66551 - 67573 + | ABC transporter, substrate binding protein (sugar) TERM 94 67616 - 67591 - f 88 -11.1 -4.07568 | gap 1, opp_overlap 67615, overlap 67592 CCGCGCCTTTGAAAA GCCGCGGGGGCA ATC TGCCCCCGCC-C ATTAACCTGAATGGT TERM 95 67616 - 67592 - f 72 -11.3 -3.04398 | opp_overlap 67615, overlap 67591 CGCGCCTTTGAAAAG CCGCGGGGGCA ATC TGCCCCCGCCC ATTAACCTGAATGGT frcC 67798 - 68880 + | ABC transporter, membrane spanning protein (sugar) frcA 68880 - 69662 + | ABC transporter, nucleotide binding/ATPase protein (sugar) Atu0066 69659 - 70288 + | putative fructose transport system kinase TERM 96 70364 - 70380 + F 71 -4.3 -4.65446 | overlap 70366 GTGTTGAATCTTTTT GATCCAC AGG GTGGGGC TTTTGTGTGTCTACT nrdH 70953 - 71174 + | glutaredoxin protein TERM 97 71371 - 71382 + G 76 -7.2 -4.56597 | opp_overlap 71356 71357 GGGGCCGTGCCGAAG CCGG TCAT CCGG TTTTTGAACGAGCCC nrdI 71188 - 71586 + | ribonucleotide reductase stimulatory protein TERM 98 73269 - 73259 - g 71 -6.8 -4.18018 | opp_overlap 73259 GCCCGCGACGGAAAA GGTC CGC GACC TGTTCGAAAAGGCCG nrdE 71679 - 73760 + | ribonucleotide-diphosphate reductase subunit alpha nrdF 73777 - 74751 + | ribonucleotide-diphosphate reductase subunit beta Atu0072 76016 - 74781 - | hypothetical protein TERM 99 74822 - 74877 + g 74 -5.8 -4.4715 | opp_overlap 74856, overlap 74823 CAAGCCGGAAGGGGC TGGAGACGGTTGCGCCGATTGCATCG AACA CGAAGGCGCCGGCGCGACCGATGCCG TTTTGTCCATTGCCG TERM 100 75711 - 75745 + g 80 -3.6 -5.07567 | gap 1, overlap 75700 GTTCGGCTCGGCCGC GCGAAGGGCGCTGAA CCCCTT TTTTGC-CTCTTCGC TTTTTTCACGTGTAC TERM 101 76551 - 76540 - g 70 -3.6 -4.60041 | opp_overlap 76547, overlap 76544 AGCGATTTCGAAAAA GCCA TGCG CGGC CGCAACCGCCTGCTT TERM 102 76634 - 76612 - g 75 -2.7 -4.9792 | gap 1, overlap 76614 GACGGCATAGAAAAA CAGATGGCCG AACT CGGC-ATCTC CATGGCGGTCGCCCG Atu0073 76045 - 77172 + | recombination protein F TERM 103 77644 - 77634 - g 78 -6.8 -4.58395 | opp_overlap 77637, overlap 77637 CGGAGGCGGCAAAAA GACC GCT GGTC ACAGGCGCTGTTGGT moeB 77195 - 77956 + | molybdopterin biosynthesis protein MoeB Atu0075 77960 - 78436 + | hypothetical protein Atu0076 79132 - 78443 - | hypothetical protein TERM 104 78771 - 78760 - G 77 -3.6 -4.9218 | TACGGACGACAAAAA CACC AGCA GGCG TTTGCGAGCCGACAT Atu0077 80185 - 79181 - | D-isomer specific 2-hydroxyacid dehydrogenases family protein Atu0078 80360 - 80899 + | hypothetical protein Atu0079 81884 - 80892 - | carbohydrate kinase TERM 105 81670 - 81658 - G 78 -10.5 -3.90922 | ACCTTGCCGAAATAA GCGGC CTT GCCGC CGAAATTCGCAACGC TERM 106 81901 - 81913 + H 82 -5.5 -5.06451 | overlap 81888 81900 GGCCCTATCCGGTTC GCACG GGG TGTGC TTTTTTCGAATGGTC TERM 107 82160 - 82143 - H 87 -8.3 -4.57474 | opp_overlap 82144, overlap 82144 TTAACGGACATAAAA GGCGGGG GTGA CCCCGCT TTTTCTTTTTTGGGG TERM 108 82144 - 82159 + H 100 -11.8 -5.75538 | opp_overlap 82143 82144 TAACGGACATAAAAG GCGGGG GTGA CCCCGC TTTTTCTTTTTTGGG TERM 109 82159 - 82144 - H 80 -11.8 -3.33761 | opp_overlap 82144, overlap 82143 TAACGGACATAAAAG GCGGGG GTGA CCCCGC TTTTTCTTTTTTGGG Atu0080 82362 - 83306 + | permease rsmC 84329 - 83313 - | ribosomal RNA small subunit methyltransferase TERM 110 84440 - 84420 - R 100 -16.1 -5.85011 | overlap 84434 CAAAAACGAAAAAAA GGCGCGGGC AGA ACCCGCGCC TCGATAGGGTCTGGC TERM 111 84453 - 84488 + r 74 -6.8 -4.30719 | opp_overlap 84434, overlap 84476 GCCTCGATAGGGTCT GGCGGCGCAGCC TTATTCGGCAGC GGCTTCGCCGTC TTTCTTGTCGGCAGC pnpA 86606 - 84465 - | polynucleotide phosphorylase/polyadenylase TERM 112 86331 - 86346 + g 71 -7.6 -4.07568 | overlap 86329 ACGGTCGATCAGGCG GGAAAC CAGT GTTTCC TTTTCCGACGGACGA TERM 113 86863 - 86835 - R 100 -16 -4.96848 | opp_overlap 86829 GGCCCGATATAAAAA CCGGCGGGTATC GTTGT GAAACCCGCCGG ATAAGATTTTAGCGG rpsO 87141 - 86872 - | 30S ribosomal protein S15 truB 88254 - 87307 - | tRNA pseudouridine synthase B rbfA 88674 - 88258 - | ribosome-binding factor A TERM 114 88719 - 88694 - R 78 -13.9 -2.64651 | opp_overlap 88690, overlap 88690 AATGCCTCAAACGGA GCGAGCGCCGG TAAG CCGGCGCCCGA CAGTAAATTCCTGTT TERM 115 88741 - 88763 + r 90 -16.4 -2.7535 | opp_overlap 88747, overlap 88738 88747 ATTCCTGTTTTGCGG CGAGAACGCT TAG AGCGTTCTCG TGATGTGTTCGACGC infB 91491 - 88750 - | translation initiation factor IF-2 TERM 116 90856 - 90881 + g 82 -12.5 -3.64822 | gap 1, overlap 90857 90868 90869 GGCGTCAGTGCGAGG CGCCGGC-GCGG CGG CCGCAGCCGGCC TTTCGCTGGCAGGCT TERM 117 90857 - 90880 + g 79 -16 -2.78679 | gap 1, overlap 90856 90868 90869 GCGTCAGTGCGAGGC GCCGGC-GCGG CGG CCGCAGCCGGC CTTTCGCTGGCAGGC Atu0088 92295 - 91594 - | hypothetical protein TERM 118 92038 - 92068 + g 79 -9.6 -4.18018 | overlap 92039 GACGTCGCGTTTGAG AGCCCGCGCGAAGA GCT TCTTCGCGATGGCC TTTTCGATCAGGGCG TERM 119 92039 - 92067 + g 72 -13.1 -3.10597 | overlap 92038 ACGTCGCGTTTGAGA GCCCGCGCGAAGA GCT TCTTCGCGATGGC CTTTTCGATCAGGGC nusA 93908 - 92292 - | transcription elongation factor NusA TERM 120 93944 - 93960 + r 71 -10.8 -3.19246 | overlap 93937 CATAATTGCGGGGAT CGCCCG TTTTC CGGGCG TTACGTTGGAATTAG Atu0090 94568 - 93972 - | hypothetical protein TERM 121 94014 - 94029 + g 74 -11.8 -3.48276 | overlap 94009 GTTCTGGTTTGCGGC GGCGGC CTTT GCCGCC TTGTCTGCCCGCAGC TERM 122 94660 - 94637 - H 100 -12.4 -4.8622 | opp_overlap 94637 94659 TCGCCTAACGAAAAA GAGCGGAGCC TTGC GGCCCCACTC TTCATCAAGCGATCA TERM 123 95343 - 95381 + G 81 -5.8 -4.7497 | overlap 95342 95326 GTCGGCCCGGCCATC GGCGGTATCATCGTTGCC GCC GCCGGTGCTGCTGCCGCC TTTTTCGTGAATGCG Atu0091 94974 - 96485 + | MFS permease mltB 97773 - 96508 - | lytic murein transglycosylase TERM 124 97501 - 97472 - G 71 -8.5 -4.06419 | gap 1, opp_overlap 97469 97472 97470 97474 TTTTCGGAGAAATAA GCGCCAGGCGAGGA GAA TTC-CGCCTGGCTC TGGCTCTGTTCCTTC recR 98413 - 97808 - | recombination protein RecR TERM 125 98334 - 98356 + g 80 -10.4 -4.07885 | opp_overlap 98318 GCCGCCCGCCGCGCC GAGCGGGGGC CAA GCCCCGGCAC TTTTGCCAGAAGCTG TERM 126 98869 - 98890 + G 85 -5.7 -5.06816 | overlap 98870 ATTTTGCCCCGCGTT TCCGGCAGG CGGG CCAGTCGGG TTTTTATTGCCGGGT Atu0094 98472 - 99086 + | hypothetical protein TERM 127 99102 - 99130 + T 78 -11.8 -3.1875 | opp_overlap 99104 GCCGTGTCCTGAGAT GAGGATGGCG AATGCTCAA CGCCATCCTC TTCAGTTGGAATATC Atu0095 99469 - 99146 - | hypothetical protein TERM 128 99176 - 99201 + g 71 -8.9 -3.7331 | overlap 99175 99177 CATGCCGGGCGGTAG CGGCAGACCTG CGGT CAGGTCAGCCA TCTTTTCCTGGGCCT TERM 129 99365 - 99346 - G 80 -10 -4.07568 | CCTTGCCGTTCAAAA TGACGGTC ACCA GACCGCCA CCGGCCCGGCCTTCG Atu0096 101368 - 99494 - | DNA polymerase III subunits gamma and tau TERM 130 100599 - 100564 - G 93 -16.2 -3.42583 | gap 1 GGAAGAGATCGACAA TGCGC-GCACGGTCGGC AAG GCCGAGCATGCCGCGCA CCGCTTCGGCCTCCA Atu0097 101634 - 102038 + | hypothetical protein Atu0098 102038 - 103000 + | mutT/nudix family protein pheA 103879 - 103016 - | prephenate dehydratase TERM 131 103294 - 103284 - G 78 -6.8 -4.69326 | opp_overlap 103283, overlap 103285 ACATTGAAGACAAAA GTCG TGA CGAC AATTTCGTCGCTCGA TERM 132 103903 - 103923 + r 100 -13.3 -4.60487 | CCGTTAGAGGGTTCT GCCTGCAAG AAT CTTGCGGGC TTTTTCGAGATCGTG kdsB 104646 - 103891 - | 3-deoxy-manno-octulosonate cytidylyltransferase cycM 104797 - 105375 + | cytochrome c TERM 133 105395 - 105424 + T 100 -13.7 -4.56597 | opp_overlap 105376 105400, overlap 105400 CATGATGGTTCATGA TAAAAGCCCGGTA TCGC TGCCGGGCTTTTG TTTTTGGACGGGCGG TERM 134 105419 - 105400 - T 85 -9.2 -4.46212 | opp_overlap 105395 105400 TGGTTCATGATAAAA GCCCGGTA TCGC TGCCGGGC TTTTGTTTTTGGACG TERM 135 105400 - 105419 + T 100 -11.4 -5.26119 | opp_overlap 105400, overlap 105395 TGGTTCATGATAAAA GCCCGGTA TCGC TGCCGGGC TTTTGTTTTTGGACG TERM 136 105487 - 105448 - T 80 -9.2 -4.18018 | overlap 105450 CGGGCGGATTGAAAA TACGGCAATGGCGCCTGA AAAA TCAGAAGCCCTTGCCGCC GCGCAATTCGGAAAT TERM 137 105485 - 105450 - T 95 -14 -3.69216 | overlap 105448 GGCGGATTGAAAATA CGGCAATGGCGCCTGA AAAA TCAGAAGCCCTTGCCG CCGCGCAATTCGGAA Atu0102 106195 - 105470 - | exopolysaccharide production protein pbpC 108778 - 106484 - | penicillin-binding protein TERM 138 108331 - 108311 - G 78 -7.5 -4.6971 | overlap 108312 108313 GAAATGCGAATAAAA CCGGCGATC TTC GATCGCCAT GACCGCCTGCGGAAT TERM 139 108330 - 108312 - G 72 -11 -3.40741 | overlap 108311 108313 AAATGCGAATAAAAC CGGCGATC TTC GATCGCCA TGACCGCCTGCGGAA Atu0104 109353 - 108895 - | hypothetical protein Atu0105 109557 - 109363 - | hypothetical protein TERM 140 109554 - 109593 + g 72 -11.5 -3.36256 | opp_overlap 109561, overlap 109555 109561 AATTGTCAGTCAGTT TCAAGAACCCGGCGC ACCTCCTCCC GCGCCGGGTTTTTGC GTTTTTGGCGATCTG TERM 141 109555 - 109592 + g 76 -15 -2.61272 | opp_overlap 109561, overlap 109554 109561 ATTGTCAGTCAGTTT CAAGAACCCGGCGC ACCTCCTCCC GCGCCGGGTTTTTG CGTTTTTGGCGATCT TERM 142 109561 - 109586 + H 100 -10.4 -4.92239 | opp_overlap 109561, overlap 109555 109554 AGTCAGTTTCAAGAA CCCGGCGC ACCTCCTCCC GCGCCGGG TTTTTGCGTTTTTGG TERM 143 109586 - 109561 - H 79 -11.1 -3.63694 | opp_overlap 109561 109555 109554 AGTCAGTTTCAAGAA CCCGGCGCA CCTCCTCC CGCGCCGGG TTTTTGCGTTTTTGG cspA 109823 - 110032 + | cold shock protein TERM 144 110073 - 110090 + G 100 -12.7 -5.45802 | opp_overlap 110071 TCGCATGAATGGAGA GGCCGGA TTTT TCCGGCC TTTTTCTTTTGAAAG Atu0107 110062 - 110223 + | hypothetical protein TERM 145 110288 - 110262 - T 71 -9.5 -3.57263 | gap 1 ATCCTGATGGTGAAA GGCAGCGTCCAT AAAA ATAGACGC-GCC CTGGAACATCAGACC TERM 146 110356 - 110373 + T 100 -10.5 -5.61881 | opp_overlap 110356 AAAAACGGATGGAAA GGTCGGG CTCG CCCGGCC TTTTTGTTTTTGCGA TERM 147 110434 - 110404 - T 100 -17.6 -4.35524 | opp_overlap 110404 TGCGCAAACGGAAAA GAGGAAGCGCCGGA TTA CCCGGTGCTTCCTC TTTTTTTTGTCATTT TERM 148 110404 - 110434 + T 100 -19.1 -6.04378 | opp_overlap 110404 TGCGCAAACGGAAAA GAGGAAGCGCCGG ATTAC CCGGTGCTTCCTC TTTTTTTTGTCATTT Atu0108 111835 - 110444 - | hypothetical protein Atu0109 112446 - 112000 - | MarR family transcriptional regulator TERM 149 112538 - 112575 + r 84 -13.4 -3.01712 | opp_overlap 112541, overlap 112541 ACAGGGGGCAAAATA AAACCGCCATGGCCGG GAGGGG TCGGCCATGGCGGTCA TATTGGAGGACAAAG TERM 150 112572 - 112541 - R 100 -18.8 -5.07652 | opp_overlap 112538 112541 GGGGGCAAAATAAAA CCGCCATGGCCG GGAGGGGT CGGCCATGGCGG TCATATTGGAGGACA TERM 151 112541 - 112572 + r 100 -19.5 -2.73875 | opp_overlap 112541, overlap 112538 GGGGGCAAAATAAAA CCGCCATGGCCGG GAGGGG TCGGCCATGGCGG TCATATTGGAGGACA Atu8081 113134 - 112724 - | hypothetical protein TERM 152 113763 - 113748 - g 76 -6 -4.66609 | overlap 113749 GACGTCATCGAAAAA TGGGGC GTCG GCCCCG AAAAGATGATCGACC TERM 153 114309 - 114321 + G 74 -6.2 -4.56597 | GCCGATCTCACCACG GCGC GACAG GCGC TTTTTGCCGCCACCA polA 113226 - 116222 + | DNA polymerase I TERM 154 116929 - 116917 - g 85 -9.1 -4.67904 | opp_overlap 116919 116923, overlap 116919 GAGGAACTGGAAAAA CTGCG CGT CGCAG CGCCTGTTATACAGA Atu0111 116299 - 117018 + | hypothetical protein TERM 155 117223 - 117213 - g 80 -3.2 -5.1356 | GTGGAGTAACAAAAA TGGC TGT ACCA AAAAGAAAAACAAGC rpmF 117212 - 117397 + | 50S ribosomal protein L32 TERM 156 117419 - 117449 + F 100 -14.9 -4.10657 | opp_overlap 117426, overlap 117426 CCGACATCATCTTTG CAAAAAACCGGTC CTCGT GGCCGGTTTTTTG TTTTCAGGACTGTCC TERM 157 117442 - 117426 - f 84 -5.8 -5.0133 | gap 1, opp_overlap 117419 117426 CATCTTTGCAAAAAA CCGGTCC TCGT GG-CCGG TTTTTTGTTTTCAGG TERM 158 117426 - 117442 + F 100 -7.2 -5.79595 | opp_overlap 117426, overlap 117419 CATCTTTGCAAAAAA CCGGTC CTCGT GGCCGG TTTTTTGTTTTCAGG TERM 159 117556 - 117575 + G 72 -2.8 -4.81163 | overlap 117558 CGGCAGGAGGGGAGT TTCGGTGA AATA TCGCTGGA TTTTGTTGATGTTTC TERM 160 119193 - 119212 + G 73 -4.9 -4.65895 | TACCGGCGGCGATTT CGGAACG CATCTT CGATCCG TTTTTCACTACCAAG Atu0113 117518 - 119386 + | two component sensor kinase TERM 161 119630 - 119611 - g 76 -12.2 -3.36515 | overlap 119609 CTTGACCCGGAAATA CCCGTCAT CCTG ATGACGGG CCATGGCGATGTGCA dctD 119383 - 120729 + | two component response regulator Atu0115 120729 - 120932 + | hypothetical protein TERM 162 121218 - 121238 + F 71 -8.2 -3.86346 | TTCTGCACCACATCG GCATGGCG ACCAG CGCCACGC TTTATCGCAAGCTCG TERM 163 121423 - 121387 - f 85 -13 -3.61089 | gap 1, opp_overlap 121402 121416, overlap 121381 GGCGAACAAGGATAA GGTCACCGTCGCCAATG CCGG CATCGGCG-CGGCGTCC CACCTGTGCGGCATG Atu0116 121502 - 121912 + | hypothetical protein TERM 164 121913 - 121960 + F 95 -14.1 -3.53012 | gap 1, opp_overlap 121917, overlap 121914 CAATATGCCGATTGA TGAACGCGGAACGACCGGCGGT ATCTC GCCGCCGGTCGA-CTGCGGTCG TTTCAACAGGCGGAC TERM 165 121914 - 121959 + F 83 -15.4 -2.71712 | gap 1, opp_overlap 121917, overlap 121913 AATATGCCGATTGAT GAACGCGGAACGACCGGCGGT ATCTC GCCGCCGGTCGA-CTGCGGTC GTTTCAACAGGCGGA TERM 166 121956 - 121917 - f 83 -12.8 -3.18383 | gap 1, opp_overlap 121914 121913 ATGCCGATTGATGAA CGCGGAACGACCGGCGG TATCTCG CCGCCGGTCGA-CTGCG GTCGTTTCAACAGGC Atu0117 122012 - 122473 + | hypothetical protein Atu0118 122483 - 123988 + | hypothetical protein TERM 167 124009 - 124032 + F 100 -14.6 -5.43414 | ATCAAAATGTGAGAC GCCGGCGATG GAAA CATCGCTGGC TTTTTTGTGTCTGGT Atu0119 124135 - 124347 + | hypothetical protein TERM 168 124397 - 124369 - g 81 -6 -4.83269 | gap 1, opp_overlap 124387, overlap 124374 AGAGCAGATGAAAAA CGACA-CAGCAGC ACTT GCCGCCGATATCG TCGATTTCTGGAAGA Atu0120 124361 - 124912 + | hypothetical protein TERM 169 124928 - 124954 + T 100 -14.5 -4.1043 | gap 1, opp_overlap 124928 ATCCGAAACAAAAAA CGCCGCCAATCC CGAA GGAT-GGCGGCG TTTCTGATGTTTAAG TERM 170 124954 - 124928 - T 100 -14.5 -5.64421 | gap 1, opp_overlap 124928 ATCCGAAACAAAAAA CGCCGCCAATCC CGAA GGAT-GGCGGCG TTTCTGATGTTTAAG dnaJ 126114 - 124981 - | DnaJ family molecular chaperone TERM 171 125797 - 125745 - G 76 -13.2 -3.07443 | gap 1, opp_overlap 125744 CCATATTGTAGCGAA GGTCGGCGCCGCGTTCGCGTCCGCC GGAG GACCGGCGCGCACG-GCCGCCGCCC ATCATCTCGCCGAAG TERM 172 125849 - 125837 - G 78 -6.9 -4.69464 | overlap 125838 AAAATATCGGAAAAA CCGCC ATT GGCGA AACCGCCGCCGCCCA TERM 173 126044 - 126057 + g 72 -2.3 -4.7254 | GCGAGTTTGCGGAAG GCGCT TTTC AGCTC TTTTTCGTCCGCGGT TERM 174 126138 - 126169 + r 76 -12.3 -3.1544 | opp_overlap 126137 126136 126140, overlap 126142 CAAGCCCCGCAAATG GATTTCCGGCTGC ACGTCG GCAGCCGGATGTC TTGCATATGGTGTGA TERM 175 126142 - 126165 + r 84 -13.9 -3.1241 | opp_overlap 126140 126137 126136, overlap 126138 CCCCGCAAATGGATT TCCGGCTGC ACGTCG GCAGCCGGA TGTCTTGCATATGGT dnaK 128106 - 126205 - | molecular chaperone DnaK TERM 176 126460 - 126500 + g 77 -12 -3.59583 | gap 1, overlap 126492 CTCGGAAACCTTGTC GCCATATTC-CTTCACCGA CTTT TCGGTGGAGTGAATGAGGC TTTCGGCCTGGTTCT TERM 177 128186 - 128218 + H 72 -4.1 -4.77036 | overlap 128179 128177 128187 TTGGATTTGCAGCCT TCGCTGCTGTTATGC GGC GTATATAAGGAGCGA TTTTTCCTGCTGCAA Atu0124 128724 - 129041 + | hypothetical protein TERM 178 129157 - 129143 - g 77 -3.4 -5.0133 | overlap 129145 129148 TACGCTTTCAAAAAA GACGAC GAT GCCGAC CGAGGAAACGGCTCT msrA 129114 - 129764 + | methionine sulfoxide reductase A Atu0126 129978 - 130970 + | membrane lipoprotein TERM 179 130986 - 131015 + F 100 -16.5 -4.34402 | opp_overlap 130978 TATGATATGTGTCTG GGGCGCATGATGA ATTT TCATCTTGCGCCC TTTTCATATCCAGCC TERM 180 132514 - 132503 - g 93 -7.2 -5.24129 | overlap 132505 TCGTTGGAGAAAAAA CGGC GGAA GCCG AAGAACAGACGCTGG Atu0127 131053 - 132558 + | ABC transporter, nucleotide binding/ATPase protein (sugar/ribonucleotide) Atu0128 132566 - 133669 + | ABC transporter, membrane spanning protein (sugar/ribonucleotide) Atu0129 133676 - 134647 + | ABC transporter, membrane spanning protein (sugar/ribonucleotide) cdd 134652 - 135056 + | cytidine deaminase deoD 135056 - 135856 + | purine nucleoside phosphorylase TERM 181 136449 - 136437 - g 74 -3.4 -4.8048 | overlap 136440 CCGGGACAGCAAAAA GAAG GTGGG CTTC AAGCCGGCCGGCGGC TERM 182 136458 - 136440 - g 70 -4.4 -4.50988 | overlap 136437 GGACAGCAAAAAGAA GGTGGGCT TCA AGCCGGCC GGCGGCATCGGCACG deoC 135859 - 136632 + | 2-deoxyribose-5-phosphate aldolase deoA 136629 - 137945 + | thymidine phosphorylase Atu0134 138474 - 137938 - | hypothetical protein TERM 183 138334 - 138351 + g 76 -9.1 -4.07687 | CTGCGGTCTGGAAGC TTCGGCG GTGG CGCCGGA TTTTGCAGCGCCGGT TERM 184 138565 - 138535 - R 100 -18.4 -5.46706 | ATCTTAAAAGAAAAA GCCATTCGCCGC TTATCGG GCGGCGAATGGC TCAAACGGTTAAGCA upp 139223 - 138594 - | uracil phosphoribosyltransferase add 140296 - 139319 - | adenosine deaminase drm 141513 - 140293 - | phosphopentomutase TERM 185 141292 - 141264 - G 70 -3.8 -4.62783 | gap 1, opp_overlap 141265 141287, overlap 141265 CATGCAGGCCAAAAA TCCGCTCCGGC GGTTCCAT GCCGGCG-GGA ATGTCGCCGCTTGCC TERM 186 141547 - 141531 - R 85 -6.5 -4.90778 | CTCACCGAAACAAAA TTGCGCC GAC GGGGCAA TGTCAGGCCGAACTG surf 142459 - 141629 - | surfeit 1 TERM 187 141936 - 141916 - G 87 -10.3 -4.4078 | TGGTTCTAAGGAAAA GCCCACCGG TTT CCGGCGCGC GCATCAGCCCGACGA TERM 188 142511 - 142477 - R 83 -12.4 -3.72576 | opp_overlap 142477 142480, overlap 142480 GCTTCCTCCAGCAAA TAACCCCATAAATC GCGCCAG GATTCATGGGGTTA TGTGTTGGCGCGGAA TERM 189 142508 - 142480 - R 80 -9.7 -4.00042 | opp_overlap 142477 142480, overlap 142477 TCCTCCAGCAAATAA CCCCATAAATC GCGCCAG GATTCATGGGG TTATGTGTTGGCGCG TERM 190 142525 - 142557 + r 100 -19.1 -3.93695 | opp_overlap 142528, overlap 142528 TATGTGTTGGCGCGG AAAGCGGCCTGCCGG CTT CCGGCAGGCCGCTGA TTTATCGCTGCTCAG TERM 191 142528 - 142554 + r 100 -25.2 -3.03012 | opp_overlap 142528, overlap 142525 GTGTTGGCGCGGAAA GCGGCCTGCCGG CTT CCGGCAGGCCGC TGATTTATCGCTGCT TERM 192 142554 - 142528 - R 100 -25.2 -3.53012 | opp_overlap 142528 142525 GTGTTGGCGCGGAAA GCGGCCTGCCGG CTT CCGGCAGGCCGC TGATTTATCGCTGCT cyoD 142961 - 142569 - | cytochrome o ubiquinol oxidase subunit IV cyoC 143587 - 142961 - | cytochrome o ubiquinol oxidase subunit III TERM 193 143427 - 143406 - G 73 -13.7 -2.70932 | overlap 143392 TCCGCGCCTGAAGGA CCGGCCGCA TAGC TGCGGCCGA GAACGGCATAGGTGG cyoB 145597 - 143594 - | cytochrome O ubiquinol oxidase subunit I TERM 194 143850 - 143834 - G 81 -13.7 -3.35992 | opp_overlap 143825 143822 ATGGATCGGAATGAA GCCGTCC AGC GGACGGC TGTAGCCGCGCTTCT TERM 195 145653 - 145629 - R 91 -14.9 -3.15503 | overlap 145627 TTCTAAGACGTAAGA TCGGCGCAGCC ATT GGCCGCGCCGC AGAATGCCGGGACGT cyoA 146672 - 145674 - | cytochrome o ubiquinol oxidase subunit II TERM 196 146586 - 146571 - G 70 -3.2 -4.62069 | CTTCCAGGCGAAAAA CAGCGT CAGG ACGATG ACCGGGACGATGATC TERM 197 147145 - 147172 + G 71 -7.8 -4.10717 | overlap 147114 147131 147149 GGATCGCATCACGAT TGCGGTCATTCT TGCG AGAATGACTGAA TTCTTTGACTTTTTC TERM 198 148141 - 148170 + G 79 -12.1 -3.55761 | gap 1 GCTGGGTCTCTCCTT CGGCCAGGCGGGCG GTG CGCTCGCCTC-CCG TTTCAGCCGTGAATA Atu0143 147053 - 148375 + | MFS permease TERM 199 148408 - 148437 + F 100 -20.1 -5.89659 | opp_overlap 148393 TCCCTGCAGCCTTCG CGCCGCGGAATCC TGTC GGATTTCGCGGCG TTTTTGTTTTTTTAT TERM 200 148452 - 148465 + G 70 -4.5 -4.43681 | GTTTTTGTTTTTTTA TTGCG TGAC CGCGA TTTTAATCTTGACTC TERM 201 148610 - 148597 - g 73 -9.5 -3.87075 | ATTATTTGCGAGAAA GCGGC CATT GCCGC CACGCCGCTTGACGG Atu0144 148441 - 148662 + | hypothetical protein TERM 202 148701 - 148672 - f 100 -8.5 -5.50499 | gap 1, opp_overlap 148688 148689, overlap 148674 CGATAGCCAAAAAAA GAGGAGCAGCCAGG TCG CCTG-CGGCTCCGC CCGCAGAGTGCCGGC TERM 203 148699 - 148674 - f 88 -9.7 -4.38666 | gap 1, opp_overlap 148688 148689, overlap 148672 ATAGCCAAAAAAAGA GGAGCAGCCAGG TCG CCTG-CGGCTCC GCCCGCAGAGTGCCG TERM 204 149315 - 149328 + G 73 -5.2 -4.59109 | overlap 149309 CTTGCCTATACCGTG CCGG ATCTTG CCGG TTTTTACCCGCTGTC TERM 205 149737 - 149719 - g 84 -11 -4.07568 | overlap 149727 GCCGGCCTGGGAAAA CGACGACA CCC TGTCGCCG GGCGTGAAGTCGATG TERM 206 151428 - 151416 - g 71 -6.9 -4.16016 | TGATGGCGGAAGAAA GAGCG CGC CGCCC TGCCGCCCTGCGTGA TERM 207 152139 - 152106 - g 79 -12.3 -3.55563 | opp_overlap 152102, overlap 152069 AGGTGACGGTGGAAA TCGCCGCCGCACGCG GTGG CACGCCCGGCGTCGA ACTCGTTTCGCCGCC gltB 148937 - 154285 + | glutamate synthase large subunit cysJ 154282 - 156051 + | sulfite reductase (NADPH) flavoprotein alpha-component Atu0147 156596 - 156090 - | hypothetical protein TERM 208 156319 - 156335 + g 73 -5.1 -4.60041 | overlap 156312 TTCTCATCCCAGGAC CAGGTGA TTT TTGCCTG TTTTTGCGCGTCGAT TERM 209 156415 - 156404 - G 70 -3.6 -4.58395 | TGTAGGGCGCAAAAA CCGC GGCT GCGA CATCCTGCATGCCTG TERM 210 156436 - 156457 + g 74 -3.7 -4.80882 | overlap 156425 156423 156438 TGCATGCCTGTGAGG TAGGTTTTG TCGA CGGAACCTG TTTTTGATATCAGGT Atu0148 157276 - 156680 - | hypothetical protein TERM 211 157436 - 157418 - R 100 -13.1 -5.24531 | opp_overlap 157418 ACGGCGCATAAAAAA GCCCGGC ACATG GCCGGGC TTTTGTCGAATATCA TERM 212 157418 - 157436 + r 100 -13.1 -4.41548 | opp_overlap 157418 ACGGCGCATAAAAAA GCCCGGC ACATG GCCGGGC TTTTGTCGAATATCA fabI 158267 - 157461 - | enoyl-(acyl carrier protein) reductase TERM 213 157618 - 157629 + g 84 -5.8 -4.98255 | overlap 157610 157615 157614 ATGTCAGCCGTTCGC CGCA ACGG TGCG TTTTTCTGGTTCCAC fabB 159497 - 158274 - | 3-oxoacyl-(acyl carrier protein) synthase I TERM 214 159566 - 159582 + r 79 -7.9 -4.4078 | overlap 159568 TGTCTGAACTATTCC GTCTGCC TCA GGCAGCC TTTTCCTTGGACAGG fabA 160088 - 159573 - | 3-hydroxydecanoyl-(acyl carrier protein) dehydratase Atu0152 160159 - 160416 + | hypothetical protein TERM 215 160795 - 160827 + G 78 -2.7 -5.02502 | gap 1, overlap 160796 160824 CGCCCACGTGGACGT GGTCATCCGC-CTT CGTCGC AAGCGCGGTTGACG TTTTTGTCTGGTATA irr 160406 - 160825 + | FUR family transcriptional regulator TERM 216 160852 - 160873 + T 70 -10.1 -3.40175 | opp_overlap 160854, overlap 160850 160848 160854 GGTATAGAATGTGAA AATGGCGCC CCTG GGCGCCATC TCTGTTTTCAGCGGT TERM 217 160871 - 160854 - T 100 -12.7 -4.23007 | opp_overlap 160852 160850 160848 160854 TATAGAATGTGAAAA TGGCGCC CCTG GGCGCCA TCTCTGTTTTCAGCG TERM 218 160854 - 160871 + T 83 -12.7 -3.26779 | opp_overlap 160854, overlap 160852 160850 160848 TATAGAATGTGAAAA TGGCGCC CCTG GGCGCCA TCTCTGTTTTCAGCG Atu0154 161539 - 160901 - | hypothetical protein Atu8116 161618 - 162136 + | hypothetical protein Atu0156 162859 - 162149 - | hypothetical protein TERM 219 162257 - 162218 - G 81 -14.2 -3.27476 | overlap 162241 162242 162256 ACGCGGAATGACCAA GGTGGCGACGGCGACCGC AAAA ACGGTTGCCGCAACCACC CACAGGGCGCCGGAC TERM 220 162255 - 162241 - G 78 -6.4 -4.62069 | overlap 162218 162242 CGGCGACCGCAAAAA CGGTTG CCG CAACCA CCCACAGGGCGCCGG TERM 221 162390 - 162377 - G 71 -5.9 -4.30719 | overlap 162378 CTCCCCCAGAAGAAA GCGGC CGAT GCCAC GCCCGAAACGGGAAA TERM 222 162646 - 162636 - G 74 -6.8 -4.36914 | TTGCCCGCCACAAAA GCGA CGA TCGC GAAAAGCAGTTTCGC Atu0157 163006 - 164007 + | ABC transporter, substrate binding protein TERM 223 164027 - 164015 - f 71 -4.7 -4.57474 | TCAAGTGAGAGAAAA GGCGG CGA CAGCC CTGCGGGGAATGCGC TERM 224 164100 - 164125 + F 86 -10.3 -4.07568 | overlap 164101 GCATGCGGTGCTCTG ATGGCGCGGCG AAAG TGCCGCGCCGG TTTTCCGGACAGGCG TERM 225 164101 - 164124 + F 84 -13.8 -3.04398 | overlap 164100 CATGCGGTGCTCTGA TGGCGCGGCG AAAG TGCCGCGCCG GTTTTCCGGACAGGC TERM 226 164172 - 164211 + G 81 -5.8 -4.84359 | opp_overlap 164172 164174 164177 TCAACCCATCAAGAA CAGCACGAGGATCA TCCTCGGCATCC TGTTCTTCGTGCTG TTTTTCTCGGCCTGG Atu0158 164146 - 164919 + | ABC transporter, membrane spanning protein Atu0159 164919 - 165704 + | ABC transporter, nucleotide binding/ATPase protein TERM 227 165786 - 165772 - g 81 -5.6 -4.72986 | overlap 165773 GATCTTGAGGAAAAA TCGCTG CAC CAGCGC ATCCGTAACGATGTC hutC 165739 - 166476 + | GntR family transcriptional regulator exbB 166742 - 167764 + | biopolymer transport protein exbD 167771 - 168274 + | biopolymer transport protein tonB 168271 - 169194 + | tonB protein TERM 228 170262 - 170224 - g 74 -6.7 -4.42667 | overlap 170225 170226 CGAAAAGCAGGAAAA TGTGCGGTTGCCC-GGTCG CCG CAGCCAGGGCATCCGCA-A GCAGGCGCTCGAAAG Atu0164 169337 - 170326 + | putative malate dehydrogenase TERM 229 170368 - 170341 - T 100 -18.5 -5.21236 | AACCGACAAGAAAAA CCCGGCGGATC GAATAT GATCCGCCGGG CAAACCGGATATGGC TERM 230 170403 - 170429 + T 81 -8.6 -4.2558 | overlap 170404 TCGCATTTGCGTCGA TTGGGCCGGACA TCA TGTCCAGCCCGC TTTTGGTCCGCCATC TERM 231 170404 - 170428 + T 76 -12.1 -3.15027 | overlap 170403 CGCATTTGCGTCGAT TGGGCCGGACA TCA TGTCCAGCCCG CTTTTGGTCCGCCAT Atu0165 170792 - 170547 - | hypothetical protein TERM 232 170964 - 170951 - R 78 -5.9 -4.75372 | ATTATGCAGTAAAAA GCCGC TTTC GCAGC AGCCGATCCCGATGG Atu0166 171184 - 170930 - | hypothetical protein Atu0167 172296 - 171256 - | AraC family transcriptional regulator TERM 233 171741 - 171725 - G 79 -8 -4.56775 | opp_overlap 171725 171719 ATGGCCTGGGAAAAA CTGACC CGTCT GGTCAG TCTCTCTTTAAATAG gmk 172935 - 172384 - | guanylate kinase phnM 174116 - 172980 - | hypothetical protein Atu0170 174802 - 174113 - | hypothetical protein TERM 234 174176 - 174186 + g 75 -8.2 -4.2123 | opp_overlap 174174, overlap 174175 ATGAACGGTAAATGG CGCG CCG CGCG TTTCTTCAATGAATA TERM 235 174530 - 174515 - G 76 -6 -4.60487 | overlap 174516 174517 GACCAGCGCGAAAAA CGGCCC AAGC GCGCCG ACGACGACGCGTGGG TERM 236 174949 - 174933 - R 76 -2.9 -5.1287 | overlap 174934 TGCAGATGGAAAAAA GCGCATT CAA AACGCGG CAAATCTTCCGAACG phnE 176435 - 175086 - | ABC transporter, membrane spanning protein (phosphonate) phnE 177421 - 176435 - | ABC transporter, membrane spanning protein (phosphonate) TERM 237 177406 - 177426 + g 76 -5.3 -4.67942 | ATAGGGTACCATTGT GCAGTGTGG TCG CCATGCCGC TTTTCCTTTATTGGC TERM 238 177471 - 177446 - R 100 -16.1 -4.11216 | CCTTTATTGGCAAAA GCGGCGACGCC GCAA GGCACCGCCGC TTCCGAATATGATCT phnD 178397 - 177492 - | ABC transporter, substrate binding protein (phosphonate) TERM 239 177968 - 177984 + g 73 -10.1 -3.68222 | CGGAGGTGGAGTCGG GGTCGGC GAA GCCGATC TTCTTGCCCTTGGCA phnC 179343 - 178483 - | ABC transporter, nucleotide binding/ATPase protein (phosphonate) TERM 240 179532 - 179512 - R 100 -14.7 -4.40003 | opp_overlap 179507 GCCGACAAACAGAAA TCCCGGGAC ATG GCCCCGGGA ATGCAATTGCTTCGG Atu0175 180177 - 179560 - | acetyltransferase phnL 180881 - 180174 - | ABC transporter, nucleotide binding/ATPase protein (phosphonate) TERM 241 180269 - 180279 + g 88 -2.4 -5.49579 | overlap 180231 GGAAGATGCCGAGCA GCGC GGT GCCC TTTTCTTTTTTCTCC TERM 242 180808 - 180790 - G 78 -5.2 -4.81249 | CCCGAAACGGAAAAA CTGACATC GCG GACGACAG GCAATTCGATGCCGT phnK 181725 - 180949 - | phosphonates transport ATP-binding protein TERM 243 181655 - 181681 + g 76 -13 -3.35046 | opp_overlap 181653, overlap 181653 AGCTCGAAGGAGACG TTGCGGCAACCG GCG CGGTCGCCGTAA TATTTGGAAACGTCC phnJ 182624 - 181722 - | hypothetical protein phnI 183867 - 182758 - | hypothetical protein TERM 244 183154 - 183142 - G 71 -6.9 -4.24204 | GAGCGAGACGGAAAA GCCGA GTT CCGGC ACATCAAGCTCGACT phnH 184480 - 183869 - | carbon-phosphorus lyase complex subunit TERM 245 184157 - 184195 + g 78 -2.2 -5.10461 | GCCGAAGGACGCGAT GGCGCTGCCCGCCTCG ATGACGG CGAAATGCGCAGCCCC TTTTTCTTCCGTCGC TERM 246 184340 - 184356 + g 76 -10.8 -3.83323 | GGCGGCAAGCGGCAG CGGCGG GGCGA CCGCCG TTTCGATTGTCTGCG phnG 184938 - 184477 - | hypothetical protein TERM 247 184513 - 184526 + g 76 -5.9 -4.67692 | GGTGAAGAAATCGAC CCGCG TGGC TGCGG TTTCTTTGGTTTTCC TERM 248 185065 - 185050 - g 72 -2.5 -4.7261 | overlap 185053 AGCGATGAAAAGAAA GAACG GCGTGG CGCTC TGGCGGCAGATCGCC TERM 249 185085 - 185053 - g 74 -6.2 -4.45807 | gap 1, overlap 185050 GATGAAAAGAAAGAA CGGCGTGGCGCTCTG GCGG CAGATCGCCG-ACCG GATCAGAGGCGAGAT TERM 250 185544 - 185526 - g 71 -8.1 -4.13945 | gap 1, opp_overlap 185526 AGGCCTATCGGAAAA GCGGCTCG ATTA CG-GCCGC TTTCAAAGCGCTTGG Atu0182 185021 - 185758 + | GntR family transcriptional regulator dapB 186595 - 185768 - | dihydrodipicolinate reductase glk 187759 - 186737 - | glucokinase mgsA 188170 - 187787 - | methylglyoxal synthase TERM 251 188101 - 188123 + g 77 -4.1 -4.93296 | CCTTCTGATGGTGAC GGGCGAAAT CCGCC ATATCGTCC TTTTTCTCGTCGTGA mepA 189325 - 188270 - | penicillin-insensitive murein endopeptidase TERM 252 189527 - 189512 - H 90 -4.6 -5.31855 | overlap 189514 CACCAAGAACAAAAA CAGGGA CATT CCCCCG ATGATATTGGCACCA TERM 253 189524 - 189514 - H 74 -6.8 -4.27297 | overlap 189512 CCAAGAACAAAAACA GGGA CAT TCCC CCGATGATATTGGCA TERM 254 189923 - 189896 - g 71 -6.8 -4.24948 | CGACGATATTGAAAA GGCGACATTCCG GCTG CGGCAGGACGCC AAATGGGCTGATGGC Atu0187 189528 - 191372 + | ABC transporter, substrate binding protein (peptide) TERM 255 191356 - 191384 + F 89 -13.2 -3.53012 | overlap 191383 ATGCGTGGTGGTCCG GCAAGGCCGG GAACTGAGG CCGGCCTTGC TTTCGCGGCGAAGGC Atu0188 191514 - 192608 + | ABC transporter, membrane spanning protein (peptide) Atu0189 192608 - 193753 + | ABC transporter, membrane spanning protein (peptide) Atu0190 193759 - 195399 + | ABC transporter, nucleotide binding/ATPase protein (peptide) TERM 256 195474 - 195451 - f 83 -9.6 -4.07568 | gap 1 TTGCTTTGCGGAAAA CGCCGACC-CA TGT TGTGGTCAGCG TGACATGGAAACGGA TERM 257 195942 - 195929 - f 71 -9.5 -3.49475 | TGGAGGCCTATAGAA CCGCC GAGA GGCGG GACGCTGACTATGCT TERM 258 197326 - 197312 - gf 72 -2.1 -4.8543 | gap 1, overlap 197314 GAACGCCTATAAAAA GGC-TG GCCT CACGCC GGTCGTGGCGACCGA TERM 259 197684 - 197716 + GF 78 -4.8 -4.78149 | gap 1, overlap 197688 CATGGCCAAGCCCTA TGGGC-TGCAGGCCG GCAA CGGCATGCATGTGCA TTTTTCCGTTCTCGA glnA 196923 - 198281 + | glutamine synthetase TERM 260 198673 - 198690 + G 70 -9.8 -3.53012 | opp_overlap 198648, overlap 198667 TGCGATCTGGTCGAC GGCGGC TTCTTC GCCGCC TTTACGCCGAAGCAG TERM 261 199433 - 199466 + G 71 -8.7 -3.74077 | opp_overlap 199435, overlap 199434 ATCTGCTCGGCAAGA TATTGGGCGAGGCCG TTGC CGGCCACGCCGAACG TTTCGATATCTGGAG TERM 262 199464 - 199435 - g 76 -13.5 -3.06696 | opp_overlap 199434 199433 CTGCTCGGCAAGATA TTGGGCGAGGCCG TTGC CGGCCACGCCGAA CGTTTCGATATCTGG ordL 198256 - 199584 + | oxidoreductase gntK 200175 - 199684 - | gluconokinase Atu0196 201021 - 200281 - | ABC transporter, membrane spanning protein (proline/glycine/betaine) Atu0197 201956 - 201018 - | ABC transporter, nucleotide binding/ATPase protein (proline/glycine/betaine) Atu0198 203098 - 201953 - | ABC transporter, membrane spanning protein (proline/glycine/betaine) TERM 263 202145 - 202105 - G 89 -10.4 -4.49756 | gap 1, opp_overlap 202116 202117 202126 CCTGAAACACGAAAA CGCCAAAACCGCCGCCGCC GATC AG-GGCGGCGATTGTCGCG AGCCCGATATTCTGC TERM 264 202372 - 202350 - G 71 -9 -3.74519 | overlap 202339 202337 AACAGCGCCACGAAA GCCGGCGCCA TGC CGATGCCGGC AATGCCGATCCTCGC TERM 265 203151 - 203182 + r 76 -12.4 -3.01924 | TCCTGGGTTGGGATC GGATGATGAGAGCG CTTC CGTTCTCATGATCC TCTTCCCGCGCCATG Atu0199 204114 - 203203 - | ABC transporter, substrate binding protein (proline/glycine/betaine) TERM 266 203903 - 203913 + g 73 -4.6 -4.63218 | overlap 203897 203892 ATGTCGATCTCGCCC GCGG TGA TCGC TTTTCTTACGACCGG TERM 267 204094 - 204070 - G 72 -2.7 -4.80455 | overlap 204075 GATGGAAACAGAAAA GGCAAGCGC AAGTCCG GCGCCCGTC AACGTCATCAAGCGG TERM 268 204177 - 204157 - R 91 -9.7 -4.66953 | overlap 204148 204158 CGAACAGGCGAAAAA TCGCCGC CGCAATT GCGGCGA AGTATCAACGGCCGG Atu0200 205311 - 204265 - | hypothetical protein TERM 269 204390 - 204404 + g 70 -10 -3.53012 | opp_overlap 204364 CATGCATCATCACCG CCATGG CCG CCATGG TTTCGAGACCGCCCG TERM 270 205449 - 205427 - R 100 -12.7 -5.18371 | opp_overlap 205412 TTCGATAAAAGAAAA GCCCGTGAC TTGTG GCCACGGGC TTGGCAATTGCCGGA aau3 205950 - 205480 - | iron-responsive transcriptional regulator Atu0202 206109 - 207173 + | ABC transporter, substrate binding protein (iron) TERM 271 207189 - 207213 + T 80 -10.6 -3.80733 | opp_overlap 207174 207190, overlap 207190 CGCCGTTTTCGCAAT ACCGGCGGGT CAATT GCCCGCCGGC TTGTTATCCAGTGAC TERM 272 207212 - 207190 - T 84 -13.4 -3.01712 | opp_overlap 207189 207190, overlap 207174 GCCGTTTTCGCAATA CCGGCGGG TCAATTG CCCGCCGG CTTGTTATCCAGTGA TERM 273 207190 - 207212 + T 86 -14.1 -2.88118 | opp_overlap 207174 207190, overlap 207189 GCCGTTTTCGCAATA CCGGCGGGT CAATT GCCCGCCGG CTTGTTATCCAGTGA Atu0203 208115 - 207198 - | hypothetical protein TERM 274 208098 - 208118 + g 84 -9.7 -4.53705 | overlap 208093 CGGAATGGTACCCAC GCGGTGG CTGATCT CCACCGC TTTTATCTCGGCCTT Atu0204 209361 - 208258 - | hypothetical protein TERM 275 209556 - 209533 - R 100 -16 -5.00884 | opp_overlap 209533 ACTTGTGCTAAAAAA GCCCCGCTGC AACA ACAGCGGGGC TTTTTATCCTGTCTA TERM 276 209533 - 209556 + r 100 -15.3 -4.96762 | opp_overlap 209533 ACTTGTGCTAAAAAA GCCCCGCTG CAACAA CAGCGGGGC TTTTTATCCTGTCTA mmsA 211141 - 209585 - | methylmalonate-semialdehyde dehydrogenase TERM 277 210854 - 210826 - G 86 -13.9 -3.48276 | overlap 210829 GCTCGCTGGAGAGAA GAACCGCAAGCTC GTT GAGGTCGCGGTTC AGAAGTTCGACGAAC TERM 278 210851 - 210829 - G 78 -9.8 -3.88232 | overlap 210826 CGCTGGAGAGAAGAA CCGCAAGCTC GTT GAGGTCGCGG TTCAGAAGTTCGACG TERM 279 210892 - 210880 - G 73 -4.7 -4.68103 | CGAACTTGAAGAAAA CGCGG GCG CGGCG CTGCGGGTTGGTGGC Atu0206 211253 - 211570 + | hypothetical protein Atu0207 211567 - 212448 + | LysR family transcriptional regulator Atu0208 212655 - 213491 + | hypothetical protein TERM 280 213613 - 213601 - f 71 -4.7 -4.53602 | overlap 213597 GGCAGAGGAAACAAA GGTGC CGG GCCCC TCTGGCGAGAGTTTT TERM 281 213891 - 213908 + G 72 -2.6 -4.75472 | opp_overlap 213880 213882, overlap 213900 AAATGACCGGCACGA TCGGCG GCACAG CGACGA TTTTCTTCATCTGCG Atu0209 213782 - 214888 + | hypothetical protein TERM 282 214901 - 214930 + F 100 -15.1 -4.60487 | gap 1, opp_overlap 214899, overlap 214904 TGATCCACAACGATC CTCGCCTTCCGCCG TGG TGGCGGAAGGC-AG TTTTTAAGCATCATA TERM 283 214904 - 214928 + F 95 -17.9 -2.61004 | opp_overlap 214899, overlap 214901 TCCACAACGATCCTC GCCTTCCGCCG TGG TGGCGGAAGGC AGTTTTTAAGCATCA TERM 284 215174 - 215128 - f 95 -14.3 -3.30903 | gap 1, opp_overlap 215130, overlap 215129 AAAACCGGTCTATAA CGCCGCCGCGCCGCGC-GATCT TTAA AGGTCTGCGCCGCGCGGCGGTT TTGTTTGTGCGGTTG TERM 285 215173 - 215129 - f 95 -17.8 -2.5806 | gap 1, opp_overlap 215130, overlap 215128 AAACCGGTCTATAAC GCCGCCGCGCCGCGC-GATCT TTAA AGGTCTGCGCCGCGCGGCGGT TTTGTTTGTGCGGTT TERM 286 215130 - 215172 + F 100 -23.5 -4.99645 | gap 1, opp_overlap 215129 215128 AACCGGTCTATAACG CCGCCGCGCCGCGC-GATCT TTAA AGGTCTGCGCCGCGCGGCGG TTTTGTTTGTGCGGT TERM 287 215525 - 215544 + G 76 -9.2 -4.03413 | opp_overlap 215526, overlap 215526 CAATGTCGTGATAAA ACGCACCG TGGC CGGTGCGC TTTATCTGGAAAAAT TERM 288 215526 - 215543 + G 72 -12.7 -3.01726 | opp_overlap 215526, overlap 215525 AATGTCGTGATAAAA CGCACCG TGGC CGGTGCG CTTTATCTGGAAAAA TERM 289 215543 - 215526 - g 100 -12.7 -4.37658 | opp_overlap 215526 215525 AATGTCGTGATAAAA CGCACCG TGGC CGGTGCG CTTTATCTGGAAAAA Atu0210 215253 - 215597 + | hypothetical protein TERM 290 216081 - 216054 - g 70 -4 -4.68593 | gap 1 CTGATGACCGAAAAA GGCGA-GGGCATC ATT GCCGCCCATTGCC GGGCCTTGGATGCGG TERM 291 216459 - 216437 - g 75 -8.3 -4.25104 | opp_overlap 216419 216449 216451 216454, overlap 216438 CTGGCTTTATGAAAA GCCGACGGC TTTCC GCCGCCGGG AAGGCTGAGACGGCG Atu0211 215616 - 216467 + | hypothetical protein Atu0212 216563 - 216922 + | hypothetical protein pncB 217114 - 218418 + | nicotinate phosphoribosyltransferase Atu0214 219871 - 218477 - | leucine aminopeptidase TERM 292 219192 - 219208 + g 78 -2.9 -5.01732 | overlap 219194 CCCTTGCCCACCAGT GTCAGTC GCG GATTGCC TTTTTTGCCCCAGTT TERM 293 219822 - 219805 - G 85 -9.1 -4.62069 | GCGTGACGGCAAAAA CCGGCAA TGTG CTGCCGG CCTTCGAGCTGAAAG Atu0215 220014 - 220838 + | hypothetical protein ctpI 221888 - 220902 - | components of type IV pilus TERM 294 220996 - 221013 + g 74 -4 -4.84359 | overlap 220995 GGCACGGTCAGTTTC GGCGGC AAAGCG GCAGCC TTTTTCTCGGCCTCA ctpH 222902 - 221898 - | components of type IV pilus TERM 295 222560 - 222547 - G 73 -9.5 -3.86684 | overlap 222556 222557 ATAAGTGAGATGAAA GCGGC ACAA GCCGC CGCGCCGGCGCTCAG ctpG 224392 - 222917 - | component of type IV pilus TERM 296 224195 - 224206 + g 85 -3.6 -5.36441 | ATTGTAATAGTCTTC CGTG CGGG CGCG TTTTTTCTGTGAGAG ctpF 225709 - 224426 - | components of type IV pilus TERM 297 225166 - 225153 - G 75 -8.1 -4.26189 | CTAGAAATGCCAAAA GCGCA ATTA TGCGC GATGGTGGAGGAACC TERM 298 225647 - 225683 + g 89 -15.7 -3.33129 | ATCCATATCCGAAGC GCGCAGCGGCGGTTCGG CTT CCGCGCCGCCGCTCAGC TTGATGTCGTATTCT ctpE 226325 - 225744 - | components of type IV pilus TERM 299 226216 - 226189 - G 70 -9.8 -3.53761 | TAATTCTGGGCGAAA CCACGGACATTG TCTG CCATGGCCGTGG TCAACCGGCTGTCGC ctpD 228076 - 226493 - | component of type IV pilus TERM 300 227439 - 227474 + g 82 -12.6 -3.61715 | gap 1, opp_overlap 227458 227460 ACGATTTGCGATACC TGTCGGCGCT-CGGCAA AAA TTGCCGCATCGCCGCCA TTGTTGCCGCCCGTG TERM 301 228023 - 227997 - G 73 -5 -4.59853 | opp_overlap 228015, overlap 227999 228013 GGAACGCCTGAAAAA GTCAGGCAGAAT GCA AGCCCGCCTGCC ATCGACGAGCGCAGA ctpC 228879 - 228073 - | components of type IV pilus ctpB 229525 - 229013 - | components of type IV pilus, prepilin peptidase TERM 302 229610 - 229571 - R 100 -15 -4.13767 | opp_overlap 229571 229589 CCGGCCACGCGAAAA TGCAGGCAACGTCCGCAC TTGT GTGGGGTCGTCACCTGCA CGATGCTTTTCAATG ctpA 229818 - 229627 - | components of type IV pilus, pilin subunit Atu0225 230143 - 229889 - | hypothetical protein TERM 303 230292 - 230304 + G 70 -4.7 -4.56597 | overlap 230288 230293 GTCTTCCTCGGGGCT GCGGC GCA GCCGG TTTTTGCCCAGGACG Atu0226 230262 - 230645 + | hypothetical protein Atu0228 231343 - 231038 - | hypothetical protein Atu0229 231481 - 231930 + | hypothetical protein Atu0230 232092 - 231934 - | hypothetical protein TERM 304 232109 - 232090 - Gf 73 -4.3 -4.614 | gap 1, overlap 232093 TGCAATCATAGAAAA CATGGCGG GCACG CCGC-ATG GACAAATTGGCGTCG guaA 232091 - 232765 + | GMP synthase Atu0232 232853 - 233041 + | hypothetical protein Atu0233 233224 - 234321 + | lysozyme Atu0234 235200 - 234325 - | hypothetical protein TERM 305 235515 - 235525 + G 100 -2.4 -5.7946 | ACGATAAGCTCACGC CCCG GCT CCGG TTTTTTTGTTGCAGG TERM 306 236150 - 236166 + G 70 -3.7 -4.64657 | overlap 236152 ACAGCCGGGCCTGAC CATCATC GAG GATGATA TTTTTGCCGATTTCG Atu0235 235332 - 236705 + | GntR family transcriptional regulator Atu0236 236801 - 237118 + | hypothetical protein TERM 307 237141 - 237162 + T 100 -15.9 -5.38054 | opp_overlap 237141 ATTGATATGATAGAA CCGCCTGCT TTTC AGCAGGCGG TTTTTCTTTGTGGAA TERM 308 237162 - 237141 - T 100 -15.9 -3.57918 | opp_overlap 237141 ATTGATATGATAGAA CCGCCTGCT TTTC AGCAGGCGG TTTTTCTTTGTGGAA Atu0237 237648 - 237190 - | hypothetical protein TERM 309 237553 - 237565 + g 71 -7.7 -4.09685 | overlap 237548 GGGATTGGTCTGCAG CATCG CCG CGATG TTTTCGGAGGTCGCG TERM 310 237899 - 237883 - g 84 -3.7 -5.24129 | TCGCGCCAGAAAAAA CATCC TGCTCGT GGATG CCGGCGAACGCAGAA TERM 311 238248 - 238233 - g 76 -6 -4.68593 | overlap 238234 TCGATCAGGGAAAAA TCGGCG TCAT CGCCGC TTCGCCAATGGCTAT TERM 312 238291 - 238303 + G 83 -4.7 -5.03314 | GATGCTTCCCGACTG GGGCG AGA CGACC TTTTTTACCAATGGC Atu0238 237803 - 238696 + | oxidoreductase Atu0239 239589 - 238693 - | AraC family transcriptional regulator TERM 313 238731 - 238741 + gF 78 -6.8 -4.62069 | opp_overlap 238718, overlap 238713 AACGGCCCGGGGGCA TGCC GAA GGCA TTTTTGAAATGCCGG Atu0240 239564 - 239971 + | hypothetical protein TERM 314 240018 - 239988 - TR 72 -11.9 -2.71924 | opp_overlap 239994, overlap 239994 GATCGGCCTTCAAAC GCAAAAGGGAGGC TGTGG GCCTCCCTTTAAC AGCGATGCAGTGATT TERM 315 240012 - 239994 - TR 93 -11.7 -4.35524 | opp_overlap 239994, overlap 239988 CCTTCAAACGCAAAA GGGAGGC TGTGG GCCTCCC TTTAACAGCGATGCA TERM 316 239994 - 240012 + Tr 81 -12.4 -3.53811 | opp_overlap 239994 239988 CCTTCAAACGCAAAA GGGAGGCT GTG GGCCTCCC TTTAACAGCGATGCA lepA 241865 - 240039 - | GTP-binding protein LepA Atu0242 242807 - 241938 - | carbon-nitrogen hydrolase TERM 317 242129 - 242117 - G 73 -10.5 -3.65902 | opp_overlap 242118 CGGACGGCACGTAAA GGGCG GCC CGCCC GCGATTTTCATCGAC Atu0243 243415 - 242804 - | hypothetical protein Atu8117 243482 - 243883 + | hypothetical protein Atu0245 243980 - 244561 + | transcriptional regulator TERM 318 244630 - 244602 - g 85 -13.1 -3.72893 | CATCCGCGTATTAAA CGGGCAGGAGACC ATC GATGCCCTGCCCG AACTCTGCGATGTCC Atu0246 244579 - 245097 + | acetyltransferase Atu0247 246185 - 245112 - | hypothetical protein TERM 319 245340 - 245362 + g 100 -9 -4.7629 | overlap 245341 TTCGGCCGCCAGCCT GTCCGCCAGC ACC GCCGGCGGAA TTTTTCCCTTGCTGC TERM 320 245341 - 245361 + g 79 -12.5 -3.45051 | overlap 245340 TCGGCCGCCAGCCTG TCCGCCAGC ACC GCCGGCGGA ATTTTTCCCTTGCTG TERM 321 246977 - 246959 - g 71 -7.3 -4.19735 | opp_overlap 246971 246972, overlap 246960 246969 GCCGGTAAAAGCAAA GCGCCGC AAACG GCGGCGG AGCCGATTTCGGACT TERM 322 247401 - 247374 - g 100 -14.8 -5.10767 | opp_overlap 247374 TATCGAACACAAAAA CGGCCACCTGGC AGAT GCCGGATGGCCG TTTGAGGATATTGAA TERM 323 247374 - 247401 + G 90 -14.8 -3.6106 | opp_overlap 247374 TATCGAACACAAAAA CGGCCACCTGGC AGAT GCCGGATGGCCG TTTGAGGATATTGAA Atu0248 246323 - 247420 + | AraC family transcriptional regulator Atu0249 248527 - 247424 - | ABC transporter, substrate binding protein (sugar) TERM 324 248132 - 248150 + g 76 -8.8 -4.05033 | overlap 248125 248133 CAGCTCGTTGCCACC GGCCTGGT TGA ACCAGGCA TTTGTCTGGCGTGCA TERM 325 248133 - 248149 + g 72 -12.3 -3.02698 | overlap 248125 248132 AGCTCGTTGCCACCG GCCTGGT TGA ACCAGGC ATTTGTCTGGCGTGC Atu0250 249062 - 248655 - | hypothetical protein TERM 326 250098 - 250118 + G 85 -7.5 -4.84761 | ATTTCTGGACGGCCA CGGCGATTG CCG CCATCGTCG TTTTTGTGGAACTCT Atu0251 249269 - 250252 + | hypothetical protein TERM 327 250287 - 250260 - T 100 -11.2 -5.75945 | overlap 250264 ACGCGTGAAAAAAAA GAAAGAGCCCGC GATG GCGGGCTCAATC AGAATTCTATCAGAC TERM 328 250283 - 250264 - T 100 -15 -5.33985 | overlap 250260 GTGAAAAAAAAGAAA GAGCCCGC GATG GCGGGCTC AATCAGAATTCTATC Atu0252 250832 - 250317 - | hypothetical protein Atu0253 251839 - 251051 - | hypothetical protein TERM 329 251962 - 251982 + H 90 -5.4 -5.15634 | opp_overlap 251951, overlap 251964 ATAACGACATTTCCG CCGCTTGT ACCAA ACAAGCTG TTTTTTGCTGACGTG TERM 330 251964 - 251980 + H 70 -6.6 -4.20707 | overlap 251962 AACGACATTTCCGCC GCTTGT ACCAA ACAAGC TGTTTTTTGCTGACG infC 252141 - 252563 + | translation initiation factor IF-3 TERM 331 252805 - 252788 - g 77 -4.1 -5.00616 | overlap 252799 GTCCGCTGCAAAAAA GCGGT TCAAGATC ACCGC CACCGGTAAGGTTGT rpmI 252753 - 252956 + | 50S ribosomal protein L35 rplT 252997 - 253401 + | 50S ribosomal protein L20 TERM 332 253434 - 253457 + F 100 -17.4 -5.0925 | opp_overlap 253434 TGTTGTCATTTTAAA CCCGCGTCGG GAAA CCGGCGCGGG TTTTTCGTTTTGAGC TERM 333 253457 - 253434 - f 95 -15.2 -3.59979 | opp_overlap 253434 TGTTGTCATTTTAAA CCCGCGTCGG GAAA CCGGCGCGGG TTTTTCGTTTTGAGC TERM 334 254259 - 254212 - g 71 -7.6 -4.08767 | overlap 254246 254248 254249 GTGATGCCCCTAAAA CCCGCGACGCAGCCTTTTCACG CTGG CTTGAAAACACCCCGCCCCGGG CAGTCGAAGAATTAA Atu0257 253566 - 254444 + | hypothetical protein TERM 335 254972 - 254938 - g 91 -7.9 -4.72986 | overlap 254912 CAGCCGGACGAAAAA GGCGA-GCGCAAGGTGC TGC GCACC-CACACCTCGCC GGTGCAGATCCGCAC pheS 254470 - 255519 + | phenylalanyl-tRNA synthetase subunit alpha TERM 336 255804 - 255829 + G 76 -10.3 -3.75153 | overlap 255773 TGCGCGCGCCGGCCT CGTCGGCGCGC TGGC GCGTCCCGGCG TTTACGTTCCGGGCA pheT 255544 - 257967 + | phenylalanyl-tRNA synthetase subunit beta TERM 337 257994 - 258023 + T 100 -16.5 -4.62471 | opp_overlap 257999, overlap 257999 CGGATGATAGAATGA AAAAAGCCGCGGC AGTT GCCGCGGCTTTTC TTTTTAGCGGTTGGC TERM 338 257999 - 258018 + T 100 -16.4 -5.26119 | opp_overlap 257999, overlap 257994 GATAGAATGAAAAAA GCCGCGGC AGTT GCCGCGGC TTTTCTTTTTAGCGG TERM 339 258018 - 257999 - T 100 -16.4 -5.35354 | opp_overlap 257999 257994 GATAGAATGAAAAAA GCCGCGGC AGTT GCCGCGGC TTTTCTTTTTAGCGG Atu0260 259028 - 258027 - | aldo-keto reductase TERM 340 259853 - 259867 + G 73 -4.2 -4.64861 | CGGGCGGCAATCGAC GGCG CAGGGCT CGCC TTTGTTTTCGAGCAG Atu0261 259145 - 260035 + | LysR family transcriptional regulator Atu0262 260479 - 260036 - | acetyltransferase TERM 341 260439 - 260453 + g 71 -8.5 -4.03978 | AGGCGCAGCCATTCC GCCCG GTCAG CGGGC TTTGTGTCGCGAATT Atu0263 261431 - 260481 - | oxidoreductase TERM 342 260590 - 260600 + g 75 -2.4 -5.00616 | GCGCTCGCGATTGGC GCCG TCA CCGC TTTTTTCCGCAACAG Atu0264 262523 - 261540 - | AraC family transcriptional regulator TERM 343 262474 - 262514 + g 82 -12 -3.92075 | gap 1, opp_overlap 262467 AGCAGCAACGCGTGC GGCGGCACAAGCGT-AT AAAAGGGA ATGACGCGTGTGCCGCC TTTATCCATCAGGCT Atu0265 263083 - 262523 - | hydrolase TERM 344 263384 - 263400 + G 85 -9.3 -4.67353 | GATCACGCCAGAGCG CGCGCGG TTG CCGAGCG TTTTTCCGTGCCTCA Atu0266 263264 - 264247 + | oxidoreductase Atu0267 264597 - 264244 - | hypothetical protein Atu0268 264851 - 264609 - | hypothetical protein TERM 345 265964 - 265981 + G 73 -9.8 -3.61178 | overlap 265950 TCGCCGCCAGGGCGT GCGCGC TTTGGT GCGCGC TTTGCCGTCGCTCGA TERM 346 266585 - 266605 + G 76 -12.6 -3.29144 | opp_overlap 266585, overlap 266588 CGCCGCGCCAAAAAA GAAGCCGG CGAAA CCGGCTTC TTCTGACCCGGGTAA TERM 347 266605 - 266585 - g 100 -13.3 -5.00616 | opp_overlap 266585 266588 CGCCGCGCCAAAAAA GAAGCCGGC GAA ACCGGCTTC TTCTGACCCGGGTAA xseA 265041 - 266639 + | exodeoxyribonuclease VII large subunit Atu0270 267842 - 266640 - | mandelate racemase / muconate lactonizing enzyme family protein TERM 348 266730 - 266748 + g 78 -6.6 -4.62069 | GAGGCCAGCACCCGG CGGCACGG TGA TCATGCCG TTTTTCACCTCGGGC TERM 349 267223 - 267235 + g 81 -4.7 -5.00884 | overlap 267224 TCCATCTTGTCGCCC ACCGC CTT GCGGA TTTTTTCAAACGGCT Atu0271 268600 - 267893 - | GntR family transcriptional regulator TERM 350 268247 - 268269 + g 70 -9.8 -3.4285 | TTCCGCGTCGGTGCG CCGGAGCGCT GCG AGCGTTACGG TTCTGACTTCGATGG TERM 351 268465 - 268440 - G 77 -11.1 -3.66139 | GACAGAGACCGGAAA GCCTCGCGAAC GACC GTGCGCGAGAC GCCCAGCTGTTGCGA pecS 269196 - 268711 - | MarR family transcriptional regulator TERM 352 268870 - 268914 + g 70 -3.3 -4.60487 | opp_overlap 268867 268870 CAGCGATATCAAGAC GCTGCGCCGGTCCTGCGGATT GTG AATGCGCTCCACCAGCCCGGC TTTTTCCAGCTGGTC TERM 353 269650 - 269669 + G 71 -5.6 -4.4017 | gap 1, overlap 269647 TCAACCCCGGTGCGG CCGCTCGCC ATC GGCGC-CGG TTTTCTCGGCATTGC pecM 269293 - 270156 + | regulator protein pecM ampS 271403 - 270165 - | aminopeptidase Atu0275 271968 - 271492 - | hypothetical protein Atu0276 272328 - 271981 - | hypothetical protein TERM 354 272720 - 272734 + G 73 -10 -3.64915 | opp_overlap 272718 GGCTTTCGACAAGGT CCAGCT CTA AGCTGG TTATCGTTTGTAGCG Atu0277 272422 - 272817 + | hypothetical protein TERM 355 272874 - 272888 + TF 82 -5.6 -5.00616 | GGCGGATAATTTCGG GCATGG GAG CCACGC TTTTTTGGCCCCACC Atu0278 273791 - 272904 - | hypothetical protein Atu0279 273790 - 274368 + | TetR family transcriptional regulator Atu0280 274510 - 274998 + | hypothetical protein TERM 356 275012 - 274980 - T 91 -9.8 -4.66537 | opp_overlap 274986, overlap 274986 TCTCGCAAGACAAAA CAGAAACGCCGCGA ACTAG TCGCGGCGTTATCG TTCAAACTGTGCTCG TERM 357 274986 - 275006 + T 95 -14 -3.51329 | opp_overlap 274980 274986 AAGACAAAACAGAAA CGCCGCGA ACTAG TCGCGGCG TTATCGTTCAAACTG TERM 358 275006 - 274986 - T 100 -14 -4.55004 | opp_overlap 274986, overlap 274980 AAGACAAAACAGAAA CGCCGCGA ACTAG TCGCGGCG TTATCGTTCAAACTG TERM 359 275025 - 275063 + T 81 -11.9 -3.47941 | gap 1, opp_overlap 275019 TCGTTCAAACTGTGC TCGACACAGTGGTATTGC CGCA GCAACA-CGCTGTGTCGA TTATAGTCCTTACTC guaA 276650 - 275073 - | bifunctional GMP synthase/glutamine amidotransferase protein pfs 277372 - 276734 - | 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase TERM 360 276762 - 276794 + g 74 -6.8 -4.28994 | opp_overlap 276748 ACCCCATCCTCGATG GCGCGGCAGAGCCG ATCGA CGGCATTGGCGAGC TTTTCATCGATGATA TERM 361 277347 - 277336 - G 71 -5.8 -4.35682 | CCATAACGAAAAGAA CGGA TTTA TCCG CAACATGCGAAAGCC Atu0283 277818 - 277369 - | hypothetical protein TERM 362 277668 - 277678 + g 71 -6.8 -4.25104 | overlap 277675 GCAATATGCCATGCT GCTG TGT CAGC TTTTCATGGAAGGGC tspO 278349 - 277897 - | tryptophan-rich sensory protein TERM 363 278090 - 278080 - G 70 -3.2 -4.59773 | CTGCATGCCGAAAAA GATC GGC GACC ACAGGAAATTCAGCA Atu0285 279494 - 278400 - | hypothetical protein TERM 364 279158 - 279141 - G 77 -8.3 -4.36914 | overlap 279143 CCCGTGGCCATAAAA GTGCCGG TTCT CCGGCGC GTGCATCACGACAGG TERM 365 279225 - 279211 - G 71 -7 -4.27474 | AAAGCCATGAAGAAA GTGCCG GGA CGGCGC GCGAAGGCCACGGTC Atu0286 280619 - 279498 - | hypothetical protein TERM 366 280403 - 280354 - G 85 -9.1 -4.63486 | opp_overlap 280354 280353 280365 ACCGTTTCAATAAAA GCCGCCTGTGCCGCCGCCTCC GTCGTTTT GGAGGGCGCGGCGCAGAAAGC CTTCATGCTGCCTTC Atu0287 282160 - 280619 - | hypothetical protein TERM 367 280680 - 280690 + g 73 -4.6 -4.66833 | opp_overlap 280679, overlap 280679 TGCAAGGCGGCAAAG GCGT TGC GCGC TTTTTGCCCTTCACC TERM 368 281723 - 281710 - G 71 -9.5 -3.83324 | GCAGAAACAGGGAAA CGGCG TCTT CGCCG GCAAGTGGCGGGCGG TERM 369 281800 - 281790 - G 91 -8.2 -4.82901 | CGGGCGTTATAAAAA GGGC CGA GCCC ATCCGAAGCCTGCGT TERM 370 282161 - 282201 + r 80 -10.4 -3.90744 | gap 1, opp_overlap 282158, overlap 282162 GGTCGGAAGGCACAT TTGGT-AGGCGGGCCGC AGTGGATC GCGGCCCGCCTTGCCGC TTATTTGAAGACGGC TERM 371 282162 - 282200 + r 81 -13.9 -2.94232 | gap 1, opp_overlap 282158, overlap 282161 GTCGGAAGGCACATT TGGT-AGGCGGGCCGC AGTGGATC GCGGCCCGCCTTGCCG CTTATTTGAAGACGG Atu0288 283479 - 282202 - | hypothetical protein TERM 372 283588 - 283549 - R 90 -11.8 -4.06904 | gap 1, opp_overlap 283559 283560 283562 TGACCCAATCACAAA CTTGTGTCAAA-CATTCTA GTT TAGAATGCTTTGAAACAAG CCCGCGCGGTATTTC sun 284924 - 283635 - | Sun protein TERM 373 284484 - 284518 + g 70 -10.7 -3.53343 | gap 1 TCGCTCGTTGAGCGC CTGCGCCTCGGCGAGC CAAC GCTCCCCGAAG-GCAG TTTCGAGGGAAGATT Atu0290 285354 - 284986 - | rare lipoprotein A TERM 374 285387 - 285373 - R 70 -7.1 -4.08216 | opp_overlap 285373 GTACTTCCCTGAAAA TCGGC CCCGC GCCGA TTGATTGTGCCCTTG Atu0291 286653 - 285781 - | hypothetical protein Atu0292 287637 - 286657 - | iron-sulfur cluster binding protein TERM 375 287299 - 287281 - G 73 -8.8 -3.86015 | CATGCTGCCCAGAAA CAGCCAGG AGC CATGGCTG CGGCTGACGAGATTG TERM 376 287317 - 287359 + g 89 -11.4 -4.18018 | gap 3, overlap 287317 GCTGACGAGATTGGT G-TGCTTGCC-CTGCCAGCCG AGAC CGGC-GGCGGCGGCAAGCGGC TTTTCCATCACCGGG TERM 377 287773 - 287739 - R 74 -7 -4.28361 | opp_overlap 287746 287769 CGAAGCCGAGTAAAA GCGCCTCCTGACGAAC GAA ATCCGTCAGTTTGCGC GCGCGTATTCGCTGC Atu0293 288630 - 287938 - | glutathione S-transferase TERM 378 289335 - 289347 + G 77 -3.3 -4.90477 | GGGCACGGACAAGCG CTCCG CCG CCGAG TTTTCGTTTTTTCTG bacA 288790 - 289596 + | undecaprenyl pyrophosphate phosphatase TERM 379 289652 - 289630 - f 100 -12.7 -5.93252 | gap 1, opp_overlap 289630 CCGAAAAACAAAAAA GCGCC-CCGG AGAA CCGGCGGCGC TTTTTTTAAACCTGT TERM 380 289630 - 289652 + F 100 -12.7 -5.42862 | gap 1, opp_overlap 289630 CCGAAAAACAAAAAA GCGCC-CCGG AGAA CCGGCGGCGC TTTTTTTAAACCTGT Atu0295 289836 - 290066 + | hypothetical protein TERM 381 290128 - 290112 - T 100 -7.2 -5.69473 | opp_overlap 290107 290112 GACAGCATAAAAAAA GCGGGA TGTGG CCCCGC TTTTGATTTCCATGA TERM 382 290112 - 290128 + T 78 -6.5 -4.56914 | opp_overlap 290112, overlap 290107 GACAGCATAAAAAAA GCGGG ATGTGGC CCCGC TTTTGATTTCCATGA Atu0296 291135 - 290155 - | NADH-ubiquinone oxidoreductase Atu0297 291544 - 291257 - | hypothetical protein pyrF 292272 - 291565 - | orotidine 5'-phosphate decarboxylase Atu0299 292873 - 292277 - | hypothetical protein Atu0300 293563 - 292970 - | methyltransferase TERM 383 293420 - 293435 + g 70 -3.2 -4.60487 | GCCGGAATGGGGATT GATGAC GCTT GCCATC TTTTTCGCCGTGATC TERM 384 293457 - 293476 + g 83 -4.2 -5.05782 | gap 1 GCCGTGATCGACGAT GTCGG-GAC AAT GGCGCCGAC TTTTTTCGGCTGGCT TERM 385 293725 - 293702 - R 100 -11 -5.26875 | opp_overlap 293702 CGCCGAATCAAAAAA CGCCGATGAA GCGA TCCACCGGCG TTTCTGGAAAAATTG dnaN 294875 - 293757 - | DNA polymerase III subunit beta TERM 386 293873 - 293849 - G 77 -3.6 -4.91109 | gap 1, opp_overlap 293855 CCGCCAGCAGAAAAA TCGCATCT-TC GCCG GAGAGCTGCGA CGTGATGTCGAGGAG TERM 387 295120 - 295108 - H 83 -6.2 -4.84529 | overlap 295117 CCATAAAGGGAAAAA CCGG AACGA CCGG CCGGCAAGGTTCGGC Atu0302 295140 - 296081 + | tetrapyrrole methylase family protein TERM 388 296130 - 296099 - g 91 -8.6 -4.75472 | gap 1, opp_overlap 296124 GGCAGAGCAATAAAA GGCGG-AAAGCCGAG CGA CGCGGCCATGCCGCC GAATATTGGGCCGCA TERM 389 296270 - 296297 + G 74 -6.9 -4.4078 | TCAAGGCGCGCGCTT CCGGTGGCAGC GCGGTG GATGCCGTCGG TTTTCATTCGCAGCA TERM 390 296346 - 296366 + G 70 -3.2 -4.67011 | gap 1, overlap 296348 CGATCTCTGGCTCTC CCGCC-GCA GGGA TGCCGGCCG TTTTTCGCTGCGCTT Atu0303 296071 - 296439 + | hypothetical protein TERM 391 296579 - 296612 + G 78 -7.3 -4.67353 | gap 1, opp_overlap 296568, overlap 296578 296581 ACCATGCCGCCGGAT GAGCGCGGCACCATCG GGC CGCTGCTGC-GCGCAC TTTTTGCCTCCGTGG nodL 296456 - 297016 + | nodulation protein L ugpA 297125 - 298423 + | ABC transporter, substrate binding protein (sn-glycerol 3-phosphate) TERM 392 298452 - 298484 + F 100 -18.5 -3.35679 | opp_overlap 298446 298443, overlap 298453 AATCAATGATCATTG TCGAGCCTCCCTTTC GAT GGAAGGGAGGCTCGC TTCTGGATAAGGAGG TERM 393 298453 - 298483 + F 100 -22 -2.61264 | opp_overlap 298446 298443, overlap 298452 ATCAATGATCATTGT CGAGCCTCCCTTTC GAT GGAAGGGAGGCTCG CTTCTGGATAAGGAG ugpA 298594 - 299475 + | sn-glycerol-3-phosphate ABC transporter membrane protein ugpE 299487 - 300329 + | sn-glycerol-3-phosphate ABC transporter membrane protein TERM 394 301391 - 301373 - g 73 -10.3 -3.64703 | TCTTCTCCAGCGAAA CCGGCAA GCGCA TTGCCGG CAAGGCGGAGCAGCT ugpC 300340 - 301440 + | sn-glycerol-3-phosphate ABC transporter ATPase TERM 395 301481 - 301455 - f 71 -8 -3.89524 | opp_overlap 301455 AGCCCAGCGCAGAAA TCGGCGCGAT GACTAAA ATTGCGCCGA TTGTCAAAACCGCTT TERM 396 301455 - 301481 + F 71 -10.2 -3.29043 | opp_overlap 301455 AGCCCAGCGCAGAAA TCGGCGCGAT GACTAAA ATTGCGCCGA TTGTCAAAACCGCTT TERM 397 301651 - 301637 - g 84 -5.7 -4.96848 | opp_overlap 301643, overlap 301639 301640 CTGCGCAGACAAAAA GACGA AGCGG TCGTC AGCGCTTCCTGCACC TERM 398 301794 - 301810 + G 78 -7.2 -4.62336 | TGTGGGATTGCACGG CCGGCG AATTC CGCTGG TTTTTCGGCTGGGAT Atu0309 301550 - 302062 + | hypothetical protein gshB 302305 - 303264 + | glutathione synthetase TERM 399 304052 - 304040 - g 78 -10.5 -3.86283 | TCAAGGGACAGGAAA GCGCG CGG CGCGC TATGGAGGTCGCGGC Atu0311 303448 - 304980 + | hypothetical protein TERM 400 305046 - 305014 - T 100 -23.5 -5.47399 | opp_overlap 305009 TTAACCGCAAAAAAA CGATGTGCCGCCAGC GGG GCGGGCGGCACATCG GGATATCAATTGACC cysK 306061 - 305093 - | cysteine synthase TERM 401 305986 - 306006 + g 91 -13.3 -3.71527 | overlap 305989 GCTTGTCGAGCCTCA CGATCGGCG TGT CGCCGATTG TTTCCGTGATTGAGG TERM 402 305989 - 306003 + g 82 -11.4 -3.98745 | overlap 305986 TGTCGAGCCTCACGA TCGGCG TGT CGCCGA TTGTTTCCGTGATTG Atu0313 306819 - 306202 - | RhtB family transporter dut 307367 - 306897 - | deoxyuridine 5'-triphosphate nucleotidohydrolase prfC 307457 - 309040 + | peptide chain release factor 3 TERM 403 309042 - 309017 - f 80 -11.9 -3.39895 | opp_overlap 309022 GTCGCCATCAAGGAA TATCACGTCGC CAAG GCGGCGTGATA TCAGCCGGATTGCAC TERM 404 310016 - 309988 - g 73 -8.8 -3.90315 | gap 1, overlap 309981 ACAAAAGATCAAGAA GCAGC-CGGGCGA TGCG CCGCCGGCGCTGC AGCTGACGGAGAATC TERM 405 310130 - 310120 - g 78 -4.6 -4.84359 | GGATGTGGAGAAAAA CGGC CGC GCCA AGCTGGAGCGTAAGG dfp 309110 - 310315 + | bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase Atu0317 310312 - 310686 + | hypothetical protein Atu0318 311608 - 310694 - | hypothetical protein TERM 406 312014 - 312028 + r 93 -4.2 -5.53991 | overlap 312001 312011 ATGCGGTCGTTACGT CTGCTT AAT AGGCGG TTTTTTTGATAACTG TERM 407 312070 - 312045 - R 78 -13.9 -2.59431 | opp_overlap 312041 312041, overlap 312041 TTTTTTGATAACTGA GGCGCCTGGCG GTCA CGCCGGGCACC TTCACGTTCTTAGCT aarF 313654 - 312080 - | ubiquinone biosynthesis protein TERM 408 312828 - 312801 - G 85 -5.4 -5.08824 | TCGGCATGGAAAAAA CCGTCGCGCAGC GTAT GCCGCAGGAAGG ACTGGATCAGCGTAT TERM 409 313482 - 313501 + g 71 -6.3 -4.30014 | overlap 313487 ACCGCCACGGCTAGC CGGTCGC TGCGCT GCGCCCG TTTTGCCTTGCTGCG ubiE 314467 - 313691 - | ubiquinone/menaquinone biosynthesis methyltransferase mutM 314611 - 315507 + | formamidopyrimidine-DNA glycosylase fadB 315554 - 316315 + | enoyl-CoA hydratase rpsT 316511 - 316777 + | 30S ribosomal protein S20 TERM 410 316800 - 316836 + F 80 -11.8 -3.36175 | gap 1, opp_overlap 316808, overlap 316800 316808 AATCACAATTAACTA TT-CAAAAAGCCTGGTC TTTT GACCGGGCTTTTTGTGA TTCTAACTGCCCATT TERM 411 316800 - 316835 + F 78 -13.4 -2.61383 | opp_overlap 316808, overlap 316800 316808 AATCACAATTAACTA TTCAAAAAGCCTGGTC TTTT GACCGGGCTTTTTGTG ATTCTAACTGCCCAT TERM 412 316808 - 316827 + F 100 -11.4 -5.01535 | opp_overlap 316808, overlap 316800 316800 TTAACTATTCAAAAA GCCTGGTC TTTT GACCGGGC TTTTTGTGATTCTAA TERM 413 316827 - 316808 - f 93 -9.2 -4.7078 | opp_overlap 316808 316800 316800 TTAACTATTCAAAAA GCCTGGTC TTTT GACCGGGC TTTTTGTGATTCTAA TERM 414 317114 - 317092 - f 80 -9.1 -4.18018 | opp_overlap 317089 317087 317086 GTCGGTGATGCAAAA CGGCCTTTG TGAGT CAATGGCCG ATCTGAGTTTTTGCA TERM 415 317249 - 317266 + F 100 -9.9 -5.06451 | TCACCTTCTTGCTAG CGGATCT TTCG AGATCCG TTTTTTCAGGTCATG TERM 416 317495 - 317480 - f 71 -4.6 -4.64861 | opp_overlap 317490 TGGGGGCAAAATAAA CGAGGG GGAT CCCTGG CGGTCGATATTTGAT TERM 417 317940 - 317922 - g 80 -14.6 -3.12351 | opp_overlap 317917, overlap 317925 CCGGCGCAGACCGAA GAACGGGC GCA GCCCGTTC AGGAGGTTGGTGCGG TERM 418 317937 - 317925 - g 76 -10.5 -3.70773 | opp_overlap 317917, overlap 317922 GCGCAGACCGAAGAA CGGGC GCA GCCCG TTCAGGAGGTTGGTG dnaA 317547 - 319109 + | chromosomal replication initiation protein TERM 419 319109 - 319138 + T 87 -13.7 -3.26932 | opp_overlap 319116, overlap 319116 CGAAAACAACGCATG AAAAAAAGCGGCC TTCG GGCCGCTTTTTTA TTGAATTCTCGTTAT TERM 420 319131 - 319116 - T 100 -11.8 -5.54894 | opp_overlap 319109 319116 AACGCATGAAAAAAA GCGGCC TTCG GGCCGC TTTTTTATTGAATTC TERM 421 319116 - 319131 + T 100 -11.8 -5.5074 | opp_overlap 319116, overlap 319109 AACGCATGAAAAAAA GCGGCC TTCG GGCCGC TTTTTTATTGAATTC hemN 320378 - 319179 - | coproporphyrinogen III oxidase ham1 321028 - 320384 - | putative deoxyribonucleotide triphosphate pyrophosphatase TERM 422 320560 - 320544 - G 71 -9.3 -3.82083 | overlap 320539 GGATCATAACCGAAA CCGCTCG TAC CGCGCGG CGGCCACACCACGGT TERM 423 321047 - 321060 + r 71 -8.1 -3.85698 | overlap 321041 GTTTTCCTGTCGGCT CAGGC GATT GCCTG TTTCTGAAGGGCAAC rph 321762 - 321046 - | ribonuclease PH TERM 424 321595 - 321625 + g 73 -5.2 -4.64334 | overlap 321597 321598 AGCGGTGACCCAGCC CTTGCCGCTGTTGC GCA GCCACGGCGGCGTC TTTTCTTCAAGGCTT TERM 425 321597 - 321623 + g 86 -12.2 -3.93367 | overlap 321595 321598 CGGTGACCCAGCCCT TGCCGCTGTTGC GCA GCCACGGCGGCG TCTTTTCTTCAAGGC TERM 426 321598 - 321622 + g 75 -13.5 -2.95538 | overlap 321597 321595 GGTGACCCAGCCCTT GCCGCTGTTGC GCA GCCACGGCGGC GTCTTTTCTTCAAGG hrcA 321899 - 322990 + | heat-inducible transcription repressor TERM 427 323006 - 323042 + F 78 -6.5 -4.59773 | opp_overlap 323014, overlap 323011 GACACATCAGCAAGA TCAGAGAATGCGGCAAG CTT TTTGCCGCAAGCCTTGA TTTTTGCCCGTCAAA TERM 428 323034 - 323014 - f 77 -11.2 -3.6075 | opp_overlap 323011 323006 AGCAAGATCAGAGAA TGCGGCAA GCTTT TTGCCGCA AGCCTTGATTTTTGC grpE 323105 - 323740 + | GRPE protein TERM 429 323758 - 323793 + T 83 -15 -2.73364 | gap 1, opp_overlap 323767, overlap 323767 CATTTATCCTTCCGT C-ATAAAAAACGCGCCT TCA GGGCGCGTTTTTTATTG TCGTTAAACTGACAG TERM 430 323767 - 323783 + T 100 -11.5 -5.59534 | opp_overlap 323767, overlap 323758 TTCCGTCATAAAAAA CGCGCCT TCA GGGCGCG TTTTTTATTGTCGTT TERM 431 323783 - 323767 - T 100 -10.8 -5.24129 | opp_overlap 323767 323758 TTCCGTCATAAAAAA CGCGCC TTCAG GGCGCG TTTTTTATTGTCGTT ptsN 324283 - 323822 - | nitrogen regulatory IIA protein TERM 432 324311 - 324353 + r 95 -14.9 -3.33315 | gap 1, opp_overlap 324313, overlap 324351 TCATGCCATCGAGAC GATGCAGGAGGCAGATGCGC CTTG GCGC-TCTGCCTCCCACGTC TTGTCAGACTGTTCA TERM 433 324351 - 324313 - R 78 -13.9 -2.64735 | gap 1, opp_overlap 324311 ATGCCATCGAGACGA TGCAGGAGGCAGATGCGC CTTG GCGC-TCTGCCTCCCACG TCTTGTCAGACTGTT Atu0331 324938 - 324366 - | sigma-54 modulation protein TERM 434 324939 - 324949 + r 80 -5.4 -4.95806 | TACACGCACACTCAT GGAA ATT TTCC TTTTTGTAGTGATTT rpoN 326716 - 325172 - | RNA polymerase factor sigma-54 Atu0333 327678 - 326869 - | ABC transporter, nucleotide binding/ATPase protein Atu0334 328251 - 327688 - | hypothetical protein TERM 435 328015 - 328033 + g 71 -8.8 -3.75629 | GCCGGCCTGAAGGGT GGTCGTGC CCT GCACAACC TTTACGTTGCCGGTA Atu0335 328972 - 328265 - | hypothetical protein TERM 436 328676 - 328691 + g 89 -11.8 -4.18494 | overlap 328682 ACCCTTTTCGTTGCG GCCCGC GACG GCGGGC TTTTCCATCACGATC TERM 437 329258 - 329271 + G 78 -4.5 -4.82901 | overlap 329259 TCGTCGTCGGCGCCT TCGGT CTTT ACCGG TTTTTCTGGCAAGGC sppA 329164 - 330117 + | proteinase IV ihfB 330144 - 330446 + | integration host factor subunit beta TERM 438 330826 - 330803 - g 72 -11.6 -3.33261 | overlap 330804 GGCGAACCGCCAGAA GGCGGCCGCC ACCG GGCAGCTGCC GCATGCGGGACAACT Atu0339 330498 - 330854 + | hypothetical protein TERM 439 330978 - 330960 - f 85 -2.3 -5.4833 | overlap 330962 330964 330965 CCATTGAAGAAAAAA GACAGCC GGCCG GGCAATC GTGCGCGTGCCGGGA Atu0340 331152 - 332081 + | SAM dependent methyltransferase trmH 332078 - 332938 + | rRNA methylase TERM 440 333253 - 333276 + G 90 -4.4 -5.44119 | TTCATCATCGCGGGA GCGGCCGGCA ATCT TCTCGACCGC TTTTTTTACGGTCAC lspA 332938 - 333426 + | lipoprotein signal peptidase TERM 441 333475 - 333458 - f 75 -6.9 -4.46493 | opp_overlap 333458, overlap 333453 333448 CCAAACATATCAAAA CCGCTGC CGTG GTAGCGG TTATGTATGAGCGAA TERM 442 335413 - 335397 - g 75 -2.2 -5.00616 | opp_overlap 335406 CTGTCCTGGAAAAAA GCGG CTATATCGT CCGC GCCGTGGACAATTTT barA 333482 - 335722 + | two component sensor kinase/response regulator hybrid Atu0344 335817 - 336698 + | hypothetical protein TERM 443 339431 - 339419 - g 76 -10.5 -3.72576 | TCCGCCGCGAGGAAA CCCGC AAG GCGGG GCCATCGAAAGTGGA mutS 336889 - 339540 + | DNA mismatch repair protein TERM 444 339922 - 339950 + G 76 -12.3 -3.28712 | opp_overlap 339918 TATCCCAAGGATGCG CCGCAGATCGCGG TCG CGGCGGTCGGCGG TTATGGCCGCGGCAC glnD 339637 - 342465 + | PII uridylyl-transferase TERM 445 343468 - 343482 + G 77 -3.5 -4.99043 | TCTTCTTGTCATGGC CGAGC CCATC GTTCG TTTTCTTTATGAACG mviN 342473 - 344062 + | virulence factor MviN TERM 446 344056 - 344038 - f 71 -4.4 -4.58283 | overlap 344040 CAAGCGCGGTAAAAA GACCGCCG AGA CGGAGGTG GGCTGATGTCCTTTT TERM 447 344297 - 344307 + G 72 -2.4 -4.7497 | opp_overlap 344291 344289, overlap 344291 GCAACCAGACCGGCG GCCG TGT CGGA TTTTTCCTGCATACC Atu0348 344062 - 344466 + | hypothetical protein TERM 448 344933 - 344914 - g 70 -10 -3.51825 | overlap 344926 344927 CCAGTTCAAGGACAA GTCCGGCA AGAA TGCCGAAC AGGTCTCGCTCGGCC trpS 344570 - 345634 + | tryptophanyl-tRNA synthetase TERM 449 345653 - 345681 + F 71 -8 -3.8766 | overlap 345656 GCCGTTGCCACGCGA ATGCGGCGGGCG GTTTG CGCCTGCCGTGA TTTGATATAATCTCC TERM 450 345656 - 345678 + F 86 -14.1 -3.00585 | overlap 345653 GTTGCCACGCGAATG CGGCGGGCG GTTTG CGCCTGCCG TGATTTGATATAATC TERM 451 345695 - 345714 + F 100 -15 -4.62069 | opp_overlap 345693 345692 GATTTGATATAATCT CCGCCCGA ACCG TCGGGCGG TTTTTCGGATCACGG Atu8118 345749 - 346240 + | putative universal stress protein Atu0351 346383 - 346946 + | hypothetical protein TERM 452 347198 - 347210 + G 84 -10.5 -4.1721 | TTCGGGTCGGCGTTG CCGCG GCG CGCGG TTTTGCCCTGTCGCT TERM 453 347577 - 347554 - g 93 -10.9 -4.42238 | opp_overlap 347569 GCAGGCCAACCAAAA CCCGCGCCG CTTTAT CTGCGCGGG CCGGATGCCCGGCCA Atu0352 346963 - 347631 + | hypothetical protein Atu0353 347675 - 348169 + | acetyltransferase TERM 454 348171 - 348185 + F 80 -4.2 -5.00616 | overlap 348173 GCGATCTTCGCTAGT TCCCTG CGA CAGGCA TTTTTTGGCGAAAGC fur 348239 - 348667 + | ferric uptake regulator TERM 455 349093 - 349115 + G 80 -9.8 -4.07568 | GATCGCCAGCCGCAT GGCCGACGGT GAG ATCGTCGTCC TTTTCCCCGAAGGCA TERM 456 349427 - 349411 - g 72 -10.9 -3.30771 | opp_overlap 349407 TCACAGCGCGGACAA TCGCAAG CGT CTTGCGA CCGATATTGCCGCTG plsC 348698 - 349492 + | 1-acyl-sn-glycerol-3-phosphate acyltransferase TERM 457 349581 - 349549 - f 79 -11.3 -3.66356 | opp_overlap 349545 349542 349559, overlap 349553 ATGCGTAAGCTGAAA TCAAGAGCAACGGAA TTG CTCCGTTGCTCTGGC ATCCTCGCTTTTCCG TERM 458 349577 - 349553 - f 95 -15.1 -3.54489 | opp_overlap 349545 349542 349559, overlap 349549 GTAAGCTGAAATCAA GAGCAACGGAA TTG CTCCGTTGCTC TGGCATCCTCGCTTT TERM 459 350151 - 350167 + G 73 -4.4 -4.59773 | gap 1, opp_overlap 350138 350137 AGGCGACGCTGCGCT CG-CGTG GCGT CACGGCG TTTTTGACGGTGCAG TERM 460 350603 - 350634 + G 72 -2.2 -4.78839 | gap 1, overlap 350610 350611 ATCGAGAAAATCCGC TCCGCCCGCCCTG ATATTGC CATGTCGGG-GGA TTTTATTGTCGGCTT miaB 349679 - 351046 + | miaB protein phoH 351087 - 352142 + | phosphate starvation inducible protein TERM 461 352287 - 352264 - g 70 -10.3 -3.54424 | GTCGATTTTCTGAAA CGGGAAGAG GAGCAA CCCTTCCCG AAAATGCCGGTCGAA Atu0358 352153 - 352659 + | hypothetical protein TERM 462 352869 - 352893 + G 71 -7.8 -4.13767 | gap 1 GACCGACGCGCTGAT GGCTGACACCG AAAT CGGTGCC-GCC TTTTCGCCTGAAGAG TERM 463 353167 - 353146 - g 100 -15.1 -4.1552 | opp_overlap 353142 353146 CAGGCCCGTAACAAA CGCCGCGCG GGTT CGCGCAGCG TCGCTTATGGCGAGG Atu0359 352675 - 353817 + | hemolysin TERM 464 353822 - 353845 + F 100 -13.2 -4.03234 | gap 1, opp_overlap 353822 ACGCCGACTAGAAAA GGTGACAGGGG AGC CCCC-GTCACC TTTATCTCAAGACGG TERM 465 353845 - 353822 - f 100 -14.6 -4.4648 | opp_overlap 353822 ACGCCGACTAGAAAA GGTGACAGGG GAGC CCCCGTCACC TTTATCTCAAGACGG TERM 466 353907 - 353888 - f 74 -7 -4.3534 | overlap 353900 TTGGAACGACCAAAA GGCCGCAG GAGA CCGCCGCC GCGATCCCACCTGTG TERM 467 354878 - 354855 - g 83 -4.4 -5.15969 | opp_overlap 354873 354874 GGCGAAGGGAAAAAA CGCCCCGACA TCAT CGTCTGGCCG GAAACCTCCGTGCCG lnt 354024 - 355613 + | apolipoprotein N-acyltransferase TERM 468 355914 - 355894 - g 88 -7.5 -4.96106 | overlap 355898 CAGAAATATGAAAAA GGCACGAAC CGC GTTGGCGCC AGTCGCCTCCAGAAT Atu0361 355747 - 356166 + | transcriptional regulator TERM 469 356215 - 356230 + F 100 -10.4 -5.71712 | opp_overlap 356215 ATGCCGGGCACTCAA CGGTCC GCAA GGACCG TTTTTTTGTGTCCGA metK 356353 - 357615 + | S-adenosylmethionine synthetase TERM 470 357718 - 357766 + F 70 -5.3 -4.45068 | gap 1, opp_overlap 357718, overlap 357719 357721 357726 GATACCGTCTACAAC T-TTTGTAACCCGCACAGTGCC CCATGT GGCGCTGTGCGGGTTAAGTCTA TTTGTTGTTGAGAGT TERM 471 357719 - 357764 + F 80 -10.4 -3.82963 | opp_overlap 357718, overlap 357718 357721 357726 ATACCGTCTACAACT TTTGTAACCCGCACAGTGCC CCATGT GGCGCTGTGCGGGTTAAGTC TATTTGTTGTTGAGA TERM 472 357721 - 357762 + F 100 -17.4 -3.49065 | opp_overlap 357718, overlap 357719 357718 357726 ACCGTCTACAACTTT TGTAACCCGCACAGTGCC CCATGT GGCGCTGTGCGGGTTAAG TCTATTTGTTGTTGA TERM 473 357726 - 357757 + F 100 -19.5 -3.23546 | opp_overlap 357718, overlap 357721 357719 357718 CTACAACTTTTGTAA CCCGCACAGTGCC CCATGT GGCGCTGTGCGGG TTAAGTCTATTTGTT TERM 474 358344 - 358355 + G 71 -7.2 -4.18018 | GCTGCAGCATTGTGC CCGC CATG GCGG TTTTGAGTGGACGGC Atu0363 357787 - 358485 + | tRNA (guanine-N(7))-methyltransferase rbsK 359448 - 358549 - | ribokinase Atu0365 360735 - 359503 - | hypothetical protein TERM 475 360548 - 360558 + g 72 -2.4 -4.78839 | overlap 360555 TCGGAGATTTCACTG TCGG CTC CCGC TTTTCTTGTGCGGTT def 360846 - 361358 + | peptide deformylase TERM 476 361849 - 361831 - g 79 -8.1 -4.44277 | gap 1 CATGAAAATGGAAAA GGGGCTCG ATAC CG-GCCCC GTCGCGCTTACCGCG TERM 477 362022 - 362046 + G 76 -7.1 -4.56597 | opp_overlap 362022 362029 TCTACGCCGCGAAGA TCGACAAGGGT GAG ACCCGTATCGA TTTTTCAAGGCCCGC fmt 361403 - 362338 + | methionyl-tRNA formyltransferase truA 362338 - 363138 + | tRNA pseudouridine synthase A Atu0369 363754 - 363158 - | hypothetical protein dapE 364934 - 363738 - | succinyl-diaminopimelate desuccinylase dapD 365803 - 364949 - | 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase TERM 478 365975 - 365963 - g 70 -3.3 -4.69664 | opp_overlap 365973, overlap 365970 GACACGACTGAAAAA CGGCA AAT TGCGG CGCAAGGACGGGGCA Atu0372 365886 - 366806 + | hypothetical protein TERM 479 368938 - 368928 - g 84 -5.4 -4.96646 | CGAGACAATGAAAAA GATC GCC GATC AGGTTCTGCAGATCA Atu0373 366973 - 369300 + | methyl-accepting chemotaxis protein TERM 480 369355 - 369321 - T 95 -12.9 -4.07885 | opp_overlap 369327, overlap 369326 369327 CATTCCCGCTGAAAA TAAAAGGGCCGCTGG CTTTT CCAGCGGCCTTTTTT TGTTCCTGTCCGGAT TERM 481 369350 - 369326 - T 100 -12.8 -5.07652 | opp_overlap 369327, overlap 369321 369327 CCGCTGAAAATAAAA GGGCCGCTGG CTTTT CCAGCGGCCT TTTTTTGTTCCTGTC TERM 482 369327 - 369349 + T 100 -16.3 -5.85737 | opp_overlap 369327 369326 369321 CGCTGAAAATAAAAG GGCCGCTGG CTTTT CCAGCGGCC TTTTTTTGTTCCTGT TERM 483 369349 - 369327 - T 100 -16.3 -3.63868 | opp_overlap 369327, overlap 369326 369321 CGCTGAAAATAAAAG GGCCGCTGG CTTTT CCAGCGGCC TTTTTTTGTTCCTGT iunH 370314 - 369370 - | inosine-uridine preferring nucleoside hydrolase TERM 484 370790 - 370772 - g 84 -6 -4.89233 | CAGGAACAGGAAAAA CGCGAT TTTCTCT ATCGCG GCATTGCAGCGCGGC hspC 370520 - 370945 + | small heat shock protein Atu0376 371002 - 371259 + | hypothetical protein TERM 485 371286 - 371268 - T 100 -9.5 -5.30616 | opp_overlap 371268 CCATTGAAAGAAAAA GCCCGCC GATTG AGCGGGC TTTATATTTGCGGGA TERM 486 371268 - 371286 + T 84 -8.8 -4.32857 | opp_overlap 371268 CCATTGAAAGAAAAA GCCCGC CGATTGA GCGGGC TTTATATTTGCGGGA Atu0377 371898 - 371302 - | hypothetical protein TERM 487 371514 - 371526 + g 73 -10.5 -3.59979 | AACGGCCTCCGTGGT CGCGC TCT GCGCG TTTGCCCTCGGGGCC Atu0378 372713 - 372000 - | hydrolase Atu0379 372820 - 373737 + | hypothetical protein argB 374667 - 373783 - | acetylglutamate kinase TERM 488 374238 - 374251 + g 78 -4.5 -4.7416 | CTATATTGCTGTCGG GATCG ATAA CGGTC TTTTTCGCCTTTTCC Atu0381 374855 - 374715 - | hypothetical protein Atu0382 375023 - 375400 + | hypothetical protein cgpA 376066 - 375413 - | GTPase EngB yidC 377862 - 376063 - | putative inner membrane protein translocase component YidC TERM 489 377682 - 377715 + g 82 -15.3 -3.1994 | gap 1 GCGGTGCACCTTCGA CGGTCG-CGCCGGGTG CGG CACCCGGTGCCGGCTG TTGCTGCGTCGTCTG rnpA 378245 - 377862 - | ribonuclease P TERM 490 378195 - 378227 + g 89 -4.8 -5.22312 | gap 1, opp_overlap 378198 378199, overlap 378199 378200 CGCCTGAACGGCAAG AAACTCCGACCGGTT TTTA AGCCGGCCGG-GTTG TTTTTTAGTCTCGCT TERM 491 378224 - 378198 - G 71 -6.5 -4.20918 | gap 1, opp_overlap 378195 378199 378200, overlap 378199 CTGAACGGCAAGAAA CTCCGACCGGTT TTTA AGCCGGCCGG-G TTGTTTTTTAGTCTC TERM 492 378199 - 378224 + g 85 -8.9 -4.69962 | opp_overlap 378198 378199, overlap 378195 378200 TGAACGGCAAGAAAC TCCGACCGGTT TTTA AGCCGGCCGGG TTGTTTTTTAGTCTC TERM 493 378323 - 378286 - R 84 -12.5 -3.33815 | overlap 378295 AGGCTCGGCAATTAA GCCGACAGACGTGCGCG GCCG CGCGCACGGCGGGCTGC GAGAACCTTGCGGCC TERM 494 378314 - 378295 - R 86 -15 -2.92425 | overlap 378286 AATTAAGCCGACAGA CGTGCGCG GCCG CGCGCACG GCGGGCTGCGAGAAC rpmH 378419 - 378282 - | 50S ribosomal protein L34 Atu0386 378733 - 378461 - | hypothetical protein TERM 495 378722 - 378750 + g 78 -2.4 -5.06414 | gap 1 ACGCGAAAAGTTATG CCAGCGTCCCA TTTTCATC TTGG-CGCTGG TTTTTGTTGGGGGAA TERM 496 378908 - 378893 - g 74 -6.8 -4.4261 | gap 1, opp_overlap 378897, overlap 378894 GGTCGAATATGAAAA GGCGGCG GAG CGC-GCC TATAAGGGCGAGGCG mcpA 378771 - 380819 + | methyl-accepting chemotaxis protein TERM 497 380855 - 380884 + F 100 -12.8 -4.57569 | overlap 380859 AAACCGGCTTAGCCT CAAGCGCCGCCC CTTTTC GGGCGGCGTTCG TTTTTCCGGCACTGA TERM 498 380859 - 380880 + F 100 -14.4 -3.80855 | overlap 380855 CGGCTTAGCCTCAAG CGCCGCCC CTTTTC GGGCGGCG TTCGTTTTTCCGGCA TERM 499 381786 - 381774 - g 71 -5.5 -4.42788 | overlap 381764 381775 381776 CGGAACTGCAGAAAA CGCTG CGG CAGCA GAAGAACCTTGTGGA TERM 500 382058 - 382081 + G 74 -11 -3.53224 | CGCGATATTCTGGCC CTCGATCCCG ATAG CGGCATCGAG TTTCACGACAGCGTC Atu0388 381014 - 382489 + | two component sensor kinase Atu8009 382568 - 382669 + | hypothetical protein TERM 501 383248 - 383268 + G 76 -8.9 -4.12456 | opp_overlap 383218, overlap 383266 CATAAAATGGCGACA GGCGGATGC TCA GCTTCTGCC TTTTGAAAATGCTGT ubiE 382964 - 383776 + | ubiquinone/menaquinone biosynthesis methyltransferase TERM 502 383893 - 383909 + F 70 -9.4 -3.64599 | TAACGTTTTCCGATT GCCCGA GATTA TCGGGC TTTCGAGTGTCATAG TERM 503 383991 - 383970 - f 72 -11.6 -3.03218 | overlap 383965 383987 TACAATATAAGCATA TGCGCTCC AGAAAA GGAGCGCA GAATGACGCCACAAT Atu0391 384108 - 385139 + | ABC transporter, nucleotide binding/ATPase protein Atu0392 385136 - 386062 + | ABC transporter, membrane spanning protein Atu0393 386062 - 386883 + | ABC transporter, membrane spanning protein TERM 504 387168 - 387190 + G 70 -4.9 -4.55697 | gap 2 GGTTCTGCGCTCTGC CGTCACGGGCA ATC TGCC-G-GACG TTTATTTCTCGGGCT TERM 505 387852 - 387837 - g 76 -6 -4.59414 | overlap 387806 387838 CGATAACAAGGAAAA GGGCGG CGTG CCGACC GGCGGCAACTCTGCC TERM 506 387910 - 387889 - g 78 -4.3 -4.7497 | overlap 387890 387894 CTGACGCAGGAAAAA GCCAAGCAG GATG CTGCGTGGA AATACCTGAAGTGGA Atu0394 386926 - 388218 + | ABC transporter, substrate binding protein (sugar) TERM 507 388263 - 388232 - f 87 -2.1 -5.59534 | opp_overlap 388233 388234, overlap 388235 AAGCAGAACAAAAAA GAAGCTGCGGGGA AATCCG TTCCCGCAGCCAT TTTGCGTAGGAAAAT TERM 508 388260 - 388235 - f 100 -10.4 -4.84921 | opp_overlap 388234 388233, overlap 388232 CAGAACAAAAAAGAA GCTGCGGGGA AATCCG TTCCCGCAGC CATTTTGCGTAGGAA Atu0395 388283 - 389083 + | hypothetical protein Atu0396 389381 - 390877 + | coenzyme A transferase TERM 509 391400 - 391390 - g 74 -6.8 -4.35518 | AAGCGGAGACGAAAA GCTG GAT CAGC AAACATATCAAGAAG Atu0397 391047 - 392369 + | hypothetical protein TERM 510 392437 - 392447 + F 77 -4 -5.07275 | TTCCGCAGATTTGTA TACA GCT TGTA TTTTTATCTGTATGG TERM 511 392607 - 392583 - g 75 -8.5 -4.18018 | overlap 392585 GCGGCGCACCGAAAA TACCCGGCAAC ACG GTGGCCGAGCA ATTGCATTGGATGAA TERM 512 392932 - 392920 - g 71 -7.7 -4.08767 | CGGACGCTGCGAAAA GGTCA AGC TGACC ATGGTGCCGTCCTTC Atu0398 392498 - 393535 + | hypothetical protein TERM 513 393562 - 393588 + F 91 -12.3 -4.07568 | AAAAAATGACATTTA CAGCTGCCGGA TGGTC TCTGGCGGCTG TTTTCCCGCGACAAA TERM 514 393937 - 393922 - g 88 -3.9 -5.46629 | overlap 393923 AAGAGGGCAAAAAAA GCGGC CTCATC ACCGC CGTAAAGCTCTATCC TERM 515 394320 - 394370 + G 71 -8.9 -3.71848 | gap 1, overlap 394303 CCCGTCGCCAAGCGC GAGGAGCATCGTCTGGCGCTGCGG GCTG CTGCGACGTCGGGTGATGC-CCGC TTCTTCCTCGGCACG TERM 516 394653 - 394616 - g 95 -13.5 -4.07568 | gap 1, opp_overlap 394624 GGCGTTTCCCGAAAA GATCGAA-ACGGGCGCCG GGC CGGTGACCGTATTCGATC CGATGTTCCCGCTTC pyrC 393648 - 394685 + | dihydroorotase TERM 517 394695 - 394713 + F 100 -17.4 -4.81212 | AACTGATTTTTATGA CCGCCGGC ACT GCCGGCGG TTTTGTTATGATCCA pyrE 394837 - 395535 + | orotate phosphoribosyltransferase TERM 518 396497 - 396475 - g 95 -12 -4.52047 | overlap 396496 GAGCAGATCAGAAAA GCTTTGGCGC TTG GCGCGAAAGC CGCTGCGGTCACTGT scrK 395635 - 396561 + | fructokinase TERM 519 396763 - 396783 + G 82 -9.6 -4.40993 | ATTGCTCGCCATTAC CCCGCCGG AAGCG CCGCCGGG TTTTGATGATTTCTG TERM 520 396826 - 396806 - g 71 -6.7 -4.1552 | GATTTCTGGAAGAAA CGCTATCGC CGT GCGCTTGCG ACAGATCCGCGACCG TERM 521 397318 - 397330 + G 70 -10.5 -3.51329 | TGTCGTGCCGACCTT CGGCC ACC GGCCG TTCTGGTTGACGCTG Atu0402 396686 - 397651 + | hypothetical protein TERM 522 397809 - 397831 + G 87 -10.6 -4.38927 | opp_overlap 397809 GAGCCTTTCCGACAA GCTGGAGG CCGGCCA CCTCCAGC TTTATTGTATCGAGG TERM 523 397831 - 397809 - g 72 -11.3 -3.28924 | opp_overlap 397809 GAGCCTTTCCGACAA GCTGGAGGC CGGCC ACCTCCAGC TTTATTGTATCGAGG Atu0403 397648 - 398376 + | hypothetical protein TERM 524 398412 - 398395 - T 100 -12.7 -5.16237 | opp_overlap 398395 AAGCGCATTAAAAAA GCCGGAG ACAG CTCCGGC TTTTTTTTAAAGGAT TERM 525 398395 - 398412 + T 100 -12.7 -5.75945 | opp_overlap 398395 AAGCGCATTAAAAAA GCCGGAG ACAG CTCCGGC TTTTTTTTAAAGGAT pgi 400057 - 398432 - | glucose-6-phosphate isomerase TERM 526 400161 - 400178 + r 83 -12.7 -3.19482 | opp_overlap 400144 400161, overlap 400159 400157 CGGGAGAAAAGAAAA GAGCCGG TCGC CCGGCTC TCTCTTCGTTCAGTT TERM 527 400178 - 400161 - R 100 -12.7 -5.18371 | opp_overlap 400161 400159 400157, overlap 400144 CGGGAGAAAAGAAAA GAGCCGG TCGC CCGGCTC TCTCTTCGTTCAGTT fadD 401900 - 400188 - | acyl-CoA synthetase fbpA1 402258 - 403307 + | ABC transporter, nucleotide binding/ATPase protein TERM 528 404037 - 404024 - g 74 -6.7 -4.4078 | TGGCGTCAAGGAAAA CCTTG CTCG CAAGG CCGGCGGCGGCGACC fbpA 403461 - 404477 + | ABC transporter, substrate binding protein (iron) TERM 529 404495 - 404535 + F 80 -9 -4.07568 | gap 1, opp_overlap 404497 404498, overlap 404497 404498 404504 CCAGTCGACGATAAC AAGGTGG-AAGGCGTTCGC ACCT GCGGACGCCTTTCCGCGTA TTTTCCAGAAGCACA TERM 530 404497 - 404533 + F 79 -11.6 -3.63744 | gap 1, opp_overlap 404497 404498, overlap 404495 404498 404504 AGTCGACGATAACAA GGTGG-AAGGCGTTCGC ACCT GCGGACGCCTTTCCGCG TATTTTCCAGAAGCA TERM 531 404498 - 404532 + F 83 -15.1 -2.78032 | gap 1, opp_overlap 404497 404498, overlap 404497 404495 404504 GTCGACGATAACAAG GTGG-AAGGCGTTCGC ACCT GCGGACGCCTTTCCGC GTATTTTCCAGAAGC TERM 532 404504 - 404525 + F 89 -13.7 -3.63589 | opp_overlap 404497 404498, overlap 404498 404497 404495 GATAACAAGGTGGAA GGCGTTCGC ACCT GCGGACGCC TTTCCGCGTATTTTC TERM 533 405111 - 405142 + G 100 -10.2 -5.03314 | gap 2, overlap 405113 405114 AACCTGCTGGAAGTG GCTCGCACGCTCGG CGTTTC CCG-GCGTGCG-GC TTTTTTCAAGGTCGC TERM 534 405113 - 405141 + G 73 -10.3 -3.61506 | gap 1, overlap 405111 405114 CCTGCTGGAAGTGGC TCGCACGCTCGG CGTTTC CCG-GCGTGCGG CTTTTTTCAAGGTCG fbpA3 404550 - 406226 + | ABC transporter, membrane spanning protein Atu0409 406406 - 408595 + | ferrichrome iron receptor Atu0410 408723 - 409586 + | AraC family transcriptional regulator TERM 535 409638 - 409619 - f 100 -7.2 -5.40072 | gap 1, opp_overlap 409618 CCTGCTTTAAAAAAA TTCCGG-TC ACG GAGCCGGAA ATCCTTCGGAACGAT Atu8119 409701 - 410108 + | hypothetical protein TERM 536 410152 - 410120 - T 70 -6.9 -4.09739 | opp_overlap 410100 GTAAGGGTCTGAAAA GGCGCTTCCGGCCAT TCT ATCATCGCAAGCGCC AGCCAAAAAGAACGG TERM 537 410187 - 410162 - T 100 -13.3 -4.66163 | opp_overlap 410165, overlap 410165 AGCGCCAGCCAAAAA GAACGGCTCCC TTTT GGGAGCCGTTT TCTGTTGGGCTTGTC TERM 538 410165 - 410184 + T 100 -15 -4.6821 | opp_overlap 410162 410165 GCCAGCCAAAAAGAA CGGCTCCC TTTT GGGAGCCG TTTTCTGTTGGGCTT TERM 539 410184 - 410165 - T 100 -15 -4.44608 | opp_overlap 410165, overlap 410162 GCCAGCCAAAAAGAA CGGCTCCC TTTT GGGAGCCG TTTTCTGTTGGGCTT Atu8120 410443 - 410201 - | hypothetical protein TERM 540 410591 - 410581 - R 79 -3.2 -5.22943 | overlap 410589 ACGAAAGCCAAAAAA CGAC AGG ATCG CGAGAACGATGACGA Atu0413 410919 - 410761 - | stress induced protein Atu0415 412248 - 411286 - | hypothetical protein TERM 541 412984 - 413016 + G 74 -7 -4.41353 | overlap 412983 412981 413000 CGGAGGGCGCGGTTG GCCGCCGCAAGC-GCC GCG GGCTGTTTGCC-CGGC TTTTCATCTATGTGA TERM 542 413184 - 413195 + G 71 -7.2 -4.14739 | overlap 413167 GCGCCCAGCCTTTCT GCCG GCCG CGGC TTTTCCGATGACTGG Atu8121 412452 - 413651 + | hypothetical protein TERM 543 413658 - 413687 + T 81 -14.3 -2.63479 | opp_overlap 413658 413659 413661, overlap 413664 413686 GGTCAATAAGGGAAA GCACAAGCGCCTC GGAT GGGGCGCTTGTGA TCGTCTCCCGGTCTT TERM 544 413687 - 413658 - T 86 -12.1 -3.85389 | opp_overlap 413658 413664 413686, overlap 413659 413661 GGTCAATAAGGGAAA GCACAAGCGCCTC GGAT GGGGCGCTTGTGA TCGTCTCCCGGTCTT TERM 545 413686 - 413659 - T 87 -15.6 -2.90751 | opp_overlap 413658 413664, overlap 413658 413661 GTCAATAAGGGAAAG CACAAGCGCCTC GGAT GGGGCGCTTGTG ATCGTCTCCCGGTCT TERM 546 413684 - 413661 - T 75 -12.4 -2.99849 | opp_overlap 413658 413664, overlap 413659 413658 CAATAAGGGAAAGCA CAAGCGCCTC GGAT GGGGCGCTTG TGATCGTCTCCCGGT TERM 547 413664 - 413681 + T 73 -10.5 -3.45849 | opp_overlap 413661 413659 413658, overlap 413658 TAAGGGAAAGCACAA GCGCCTC GGAT GGGGCGC TTGTGATCGTCTCCC Atu0418 414582 - 413701 - | hypothetical protein TERM 548 414076 - 414093 + g 75 -7.7 -4.23674 | CTTTTCCAGACGCGG CGTTTCC TTGA GGAAGCG TTTGTGTTCGTCCGG TERM 549 415009 - 414997 - g 70 -4.7 -4.56597 | GCCGTTCGGGAAAAA CCGGC GGC GCCCG AAAAGGATAAAGAGA Atu0419 414781 - 416082 + | two component sensor kinase Atu0420 416278 - 417312 + | ABC transporter, substrate binding protein (phosphate) TERM 550 417350 - 417317 - f 86 -10.9 -4.20516 | opp_overlap 417314 417323, overlap 417321 CTTCGATGTAATAAA GAAAGAGGGGTGCTG CCTG CCGCGCCCCTCGTTC CGCTTCGGTGCCATT TERM 551 417346 - 417321 - f 100 -10.3 -4.69214 | opp_overlap 417314 417323, overlap 417317 GATGTAATAAAGAAA GAGGGGTGCTG CCTG CCGCGCCCCTC GTTCCGCTTCGGTGC pstC 417601 - 419085 + | ABC transporter, membrane spanning protein TERM 552 419177 - 419205 + G 85 -9.5 -4.68655 | CTATGCCGCCGAACG TCGCTTCCGTGCC TAC GGAATGGCAGCGA TTTCTTTTGGCCTTC pstA 419082 - 420404 + | ABC transporter, membrane spanning protein TERM 553 420485 - 420468 - g 72 -2.7 -4.77165 | CGCTGGACAAGAAAA TGAATGA AGTC TCATACA AGATGATCGGCAAGG pstB 420419 - 421234 + | ABC transporter, nucleotide binding/ATPase protein TERM 554 421317 - 421266 - f 76 -9.6 -3.77832 | gap 4 CTCGAAACCGAACAA GACTGGTGCCT-C-TGC-CGTGCCCG CTTC CGGGCACGCGCATGCAGGC-CAAGCC GGAGGACTAGACCAT phoU 421331 - 422056 + | phosphate transport system regulatory protein phoB 422089 - 422772 + | two component response regulator TERM 555 422803 - 422767 - f 76 -11.7 -3.07443 | gap 1, opp_overlap 422775 GGATATTCGATGGAA GC-CTGAGAGGAACCG AACTGA CGGTTCCTTTCAGCGC GACATACTCCAAAAT TERM 556 422856 - 422818 - f 86 -10.3 -4.18401 | opp_overlap 422824, overlap 422824 CGACATACTCCAAAA TCGAAAGGCCCGAAACC GGAAT GGTGTCGGGCCTTTTCA TTTTGAACCTTCCGC TERM 557 422850 - 422824 - f 100 -13.7 -3.93061 | opp_overlap 422824, overlap 422818 ACTCCAAAATCGAAA GGCCCGAAACC GGAAT GGTGTCGGGCC TTTTCATTTTGAACC TERM 558 422824 - 422850 + F 100 -14.4 -4.67038 | opp_overlap 422824 422818 ACTCCAAAATCGAAA GGCCCGAAACCG GAA TGGTGTCGGGCC TTTTCATTTTGAACC TERM 559 423030 - 423015 - f 100 -8.2 -5.60993 | opp_overlap 423013 423015 TTTGTCACAAAAAAA CGGGCC CGAA AGCCCG TAGTTTTTGAGTGTC Atu0426 423109 - 423690 + | hypothetical protein TERM 560 423928 - 423945 + G 100 -12.7 -5.0925 | TGACAATAGTGCCGG TGCCGCC GCAA GGCGGCA TTTTTGATTTTCAGG Atu0427 423750 - 423998 + | hypothetical protein TERM 561 424275 - 424265 - g 71 -5.4 -4.34402 | GCCCGGACAGGAAAA GCTT GCA AAGC GACTGACGGAAGCGA TERM 562 424696 - 424712 + G 78 -2.2 -5.1287 | overlap 424696 AGGTCCAGACCGGCG TTGGCC GCACG GGCAAA TTTTTTGCCTATGAG TERM 563 425102 - 425124 + G 72 -11.2 -3.29144 | TCTGCTCGGCGTACC GGCGGGAGAC AAC GTCATCCGCC TTCTGCCGCCACTCG argD 424029 - 425228 + | bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein TERM 564 425265 - 425242 - f 100 -9.5 -5.02606 | GAGGAAACAATAAAA GCGGGCCTC TTCCTG GAGGCTCGC GAGCATGGGATAGTT TERM 565 425406 - 425426 + G 73 -13.3 -2.73875 | opp_overlap 425401, overlap 425404 CGGCGGAAAAGCCGC TGGCCGGCA AGA TGCTGGCCA TGATCTTCGAAAAGC argF 425285 - 426202 + | ornithine carbamoyltransferase hslO 426439 - 427428 + | Hsp33-like chaperonin TERM 566 427455 - 427476 + T 89 -8.7 -4.54727 | gap 1, opp_overlap 427455 ATGCCTGAATCGAAA GTCGCGCTCT AAC AG-GCGCGGC TTTTCCTTTGCCGGG apaG 427893 - 427501 - | ApaG TERM 567 428077 - 428110 + r 72 -12.4 -2.7644 | opp_overlap 428079, overlap 428076 GCGGCCGATCAGGCA AACCATGGCCCGAC ACCTGG GTCGGGCCATGGCG ATTTGCCGATTGAAT TERM 568 428108 - 428079 - R 100 -19.4 -3.68351 | opp_overlap 428077 428076 GGCCGATCAGGCAAA CCATGGCCCGAC ACCTGG GTCGGGCCATGG CGATTTGCCGATTGA Atu0432 429312 - 428128 - | O-succinylhomoserine sulfhydrylase TERM 569 429357 - 429337 - H 100 -6.8 -6.09196 | gap 1, opp_overlap 429337 429352, overlap 429352 429354 TTCAAAACAAAAAAA CCGG-CCGC AAAA GCAGACCGG TTCCTAGCACCCGGT TERM 570 429352 - 429373 + H 75 -5.8 -4.60255 | opp_overlap 429337 429352 429354, overlap 429337 CCGGCCGCAAAAGCA GACCGGTT CCTAGC ACCCGGTC TTTTTAGCCACTTGT dcd 429508 - 430620 + | 2'-deoxycytidine 5'-triphosphate deaminase Atu0436 430993 - 433149 + | hypothetical protein TERM 571 433778 - 433793 + G 88 -2.6 -5.48054 | gap 1 GCCAAGAACAATCCT TCCATTG GAA CAA-GGA TTTTTTCATTTTGGT Atu0437 433149 - 433829 + | hypothetical protein intD 434859 - 433831 - | phage-related integrase TERM 572 434966 - 434984 + r 71 -4.4 -4.57569 | overlap 434969 CAATGTGTCCAGCGC GGTCGGCG TCA TGCCGTTC TTTTTCAAGGCCTCA TERM 573 434969 - 434981 + r 75 -6.9 -4.40561 | overlap 434966 TGTGTCCAGCGCGGT CGGCG TCA TGCCG TTCTTTTTCAAGGCC TERM 574 435108 - 435130 + r 100 -17.7 -3.65902 | TGACTTTGATTGCGA GCGCGGGCG ACACC CGCCCGCGC TTTGGCTGAAATCAG Atu8122 436047 - 435142 - | hypothetical protein TERM 575 436004 - 435981 - G 72 -11 -3.33261 | opp_overlap 435980 435979 436000 CCGGAACCTGCACAA TCGCGGCGTT GGTC AAAGCCGCGA GCTTTGCGATTTCGG TERM 576 436680 - 436727 + r 81 -11.8 -3.57144 | opp_overlap 436695 GATCAAAGCTACCTC CATCCGTTCGGGAAACCGCCTC GCGG GAGGCGGAAACCGGAGCGGACG TTTCAGGCTGCGGCC TERM 577 436712 - 436695 - R 85 -12.7 -3.53224 | opp_overlap 436680 CATCCGTTCGGGAAA CCGCCTC GCGG GAGGCGG AAACCGGAGCGGACG Atu8123 437330 - 437097 - | hypothetical protein TERM 578 437459 - 437424 - R 73 -6 -4.41494 | gap 1, opp_overlap 437457, overlap 437427 437429 CATGGCGAAGGAAAA GAAGAGGGCCTGCATCG TAA CGA-GAAGGCCCGCCGC CGTTGCCAAGGCGAT TERM 579 437456 - 437427 - R 81 -8.5 -4.32402 | gap 1, overlap 437424 437429 GGCGAAGGAAAAGAA GAGGGCCTGCATCG TAA CGA-GAAGGCCCGC CGCCGTTGCCAAGGC TERM 580 437454 - 437429 - R 74 -9.7 -3.75762 | gap 1, overlap 437427 437424 CGAAGGAAAAGAAGA GGGCCTGCATCG TAA CGA-GAAGGCCC GCCGCCGTTGCCAAG Atu8124 437917 - 437495 - | hypothetical protein TERM 581 437880 - 437898 + g 89 -11 -4.14392 | CCGGAAAACTTCTTT GCCTTGTC TCC GACGAGGC TTTTGAACATTGCAA Atu0443 439111 - 438416 - | putative phage repressor TERM 582 439071 - 439083 + g 100 -3.3 -5.97575 | overlap 439072 ATACGTGCGGTTCTA ATGGC TTG GCCAA TTTTTTTTCTAAGTT TERM 583 439072 - 439082 + g 71 -6.8 -4.16105 | overlap 439071 TACGTGCGGTTCTAA TGGC TTG GCCA ATTTTTTTTCTAAGT TERM 584 439118 - 439138 + H 71 -8.4 -3.82097 | overlap 439120 GTGATCCATGGCCGC GATGAAAG GGGAA CTTTCATC TTTCGTCCATTTAAG Atu0444 439119 - 439418 + | hypothetical protein TERM 585 439404 - 439426 + F 71 -6.2 -4.35524 | overlap 439407 GGACCCGCTGAGTTG GAGGCCGC AGAATGA GCGGCGTC TTTTCCGTTTCGCGC TERM 586 439470 - 439481 + F 74 -7.2 -4.11664 | GGCCTGCTGCGACCC GCGC CGGT GCGC TTTCCTTCTTCTCGC TERM 587 439609 - 439591 - f 100 -16 -4.63527 | opp_overlap 439598 439599 CCACCACGGGAAAAA CGCCGGGA TTT TCCCGGCG CGGGAAAGGTATTGT Atu0445 439628 - 440125 + | hypothetical protein TERM 588 440165 - 440190 + F 95 -11.1 -4.59109 | opp_overlap 440164 CCGAACTGATGAAGC GCCCCTTGTCC GAAC GTGCAAGGGGC TTTTTGCGGCATGTG TERM 589 440953 - 440935 - g 95 -13.2 -4.11216 | opp_overlap 440935 GCGGCAGGCCGAAAA CCACTTCC GAT GGAAGTGG TTTTTTCGTTGCTGA TERM 590 440935 - 440953 + G 100 -13.2 -5.30155 | opp_overlap 440935 GCGGCAGGCCGAAAA CCACTTCC GAT GGAAGTGG TTTTTTCGTTGCTGA TERM 591 441741 - 441727 - g 85 -12.8 -3.73775 | TCCAGCCGCAGGAAA CCGCCG TCA CGGCGG AAAGCGAGGCGGCAT Atu0446 440613 - 441758 + | hypothetical protein TERM 592 442306 - 442347 + G 79 -12.1 -3.5393 | opp_overlap 442304 CCTTGAAATCAAGGG CGCGGGCGGGCCGGTGC GCGACAAG GCGCAGGCCCACACGCG TTTGAAAAGCATCCT Atu8082 441917 - 442468 + | hypothetical protein TERM 593 443026 - 443008 - g 74 -5.9 -4.56597 | opp_overlap 443023, overlap 443010 GCGCGCGCCGAAAAA GCCGCTG CTGAC CAGCGCC GGGCGCATGGCGATC Atu0447 442525 - 443106 + | hypothetical protein TERM 594 443143 - 443172 + G 80 -9.9 -4.07568 | gap 1, opp_overlap 443132 443131, overlap 443149 AAATTCTGGCGGACT GCCAGACGGACGCG GCG CGCG-CGGACTGGC TTTTGCGCGCGCCGC TERM 595 443149 - 443193 + G 72 -13.5 -2.62184 | gap 1, overlap 443143 TGGCGGACTGCCAGA CGGAC-GCGGCGCGCGCGGA CTGGCT TTTGCGCGCGCCGCAGGGCG TCATCTACCGCGACC Atu0448 443103 - 443396 + | hypothetical protein TERM 596 443761 - 443731 - g 73 -10.4 -3.69702 | opp_overlap 443735 443757, overlap 443732 443747 CAGCACCGAAGATAA CGAAGGCGGTGGAA ATC CTCCACCGCGTTCC GTCGCCAAGGCGGTG TERM 597 443760 - 443732 - g 73 -13.9 -2.81339 | opp_overlap 443735 443757, overlap 443731 443747 AGCACCGAAGATAAC GAAGGCGGTGGAA ATC CTCCACCGCGTTC CGTCGCCAAGGCGGT Atu0449 443396 - 444616 + | hypothetical protein nusG 444726 - 445292 + | transcription antitermination protein TERM 598 445470 - 445490 + F 100 -9.7 -5.00138 | opp_overlap 445470 GCGGACTTGAGCAAA GGCGACC CTAACCC GGTCGCC TTTTTCGTTTGCATA TERM 599 445490 - 445470 - f 74 -9.7 -3.74693 | opp_overlap 445470 GCGGACTTGAGCAAA GGCGACC CTAACCC GGTCGCC TTTTTCGTTTGCATA Atu8125 445537 - 446106 + | hypothetical protein TERM 600 446250 - 446224 - g 70 -3.6 -4.63218 | opp_overlap 446229, overlap 446227 446229 GCTCTGTGAAGAAAA TTATAGGGGGGT TCC ACCGCCCTTTCA GTGGAATCGGAATCA TERM 601 446730 - 446719 - g 81 -5.8 -4.72986 | overlap 446720 446723 GACGGCCATGAAAAA CGCA GCCA TGCG CGGCGAACTGATTTC Atu8083 446189 - 447001 + | hypothetical protein TERM 602 447166 - 447184 + T 79 -11 -3.66654 | CGGTGGAACACGACT TCGGTTGC GGT GCGACCGA TTTCCGCTTCGGCTA Atu0452 447747 - 447142 - | hypothetical protein TERM 603 447242 - 447263 + g 100 -13.7 -4.25458 | CTGCCTGACTTCGTT GGGGGAGCC GCCC GGCTCTCCC TTTCTTCGTCACGTT TERM 604 447648 - 447675 + g 71 -7.6 -4.07687 | overlap 447649 GGCGAAAACTGGAAG CCGCCGTTGACC GGAA GGTTGGCGGCGC TTTTGGCGAAACGGT Atu0453 448012 - 448758 + | hypothetical protein Atu0454 448758 - 449309 + | hypothetical protein Atu8126 449518 - 450183 + | putative phage tail protein I TERM 605 450758 - 450740 - g 73 -4.5 -4.58395 | GCGACCGTGTAAAAA CCCTCTA TGAAG TGGAGGG CCGCGTAACGGCGCT Atu8127 450196 - 452397 + | hypothetical protein Atu0457 452511 - 454250 + | hypothetical protein Atu0458 454615 - 454247 - | hypothetical protein Atu8128 454649 - 455113 + | putative bacteriophage P2 tail protein TERM 606 455146 - 455173 + G 81 -5.4 -4.82901 | opp_overlap 455140 455137, overlap 455140 ACACAACACGGCAGG GCGAGACGGTTG ACCT CGCCTGCCTCGC TTTTTATGGGCGCAC Atu0460 455118 - 455330 + | hypothetical protein Atu0461 455333 - 456493 + | hypothetical protein Atu0462 456537 - 457178 + | endolysin Atu0463 457471 - 457154 - | hypothetical protein TERM 607 457209 - 457230 + g 73 -13.7 -2.80816 | CTGCATTGATCGGGG GCGGCATCG TTAT CGGTGCCGC TCTCATGGCTGCGCC TERM 608 457606 - 457625 + G 76 -12.2 -3.33492 | GATGAATGCGTGGGT TGGTGGTG CGTT CACCACCA TTATCGCCTCCCTGC Atu0464 457559 - 457882 + | hypothetical protein TERM 609 457895 - 457909 + T 100 -12.8 -4.27259 | opp_overlap 457895 TGACGCACAAAAAAA GCCCGC AAC GCGGGC TTTTCCATCTCTATA TERM 610 457909 - 457895 - T 100 -12.8 -5.64274 | opp_overlap 457895 TGACGCACAAAAAAA GCCCGC AAC GCGGGC TTTTCCATCTCTATA Atu0465 458391 - 457933 - | transcriptional regulator Atu0466 458753 - 458394 - | hypothetical protein Atu0467 459028 - 458882 - | hypothetical protein TERM 611 458948 - 458925 - G 100 -16 -5.14563 | gap 1, opp_overlap 458925 TTCGCTATCAAAAAA GCCGCCCGTGC CGC GC-CGGGCGGC TTTTTGCGTTTCGGT TERM 612 458925 - 458948 + g 100 -16 -4.81851 | gap 1, opp_overlap 458925 TTCGCTATCAAAAAA GCCGCCCGTGC CGC GC-CGGGCGGC TTTTTGCGTTTCGGT Atu0468 459236 - 459649 + | hypothetical protein Atu0469 459731 - 460009 + | hypothetical protein Atu0470 460159 - 460419 + | hypothetical protein Atu0471 460756 - 460517 - | hypothetical protein TERM 613 461463 - 461440 - g 72 -11.8 -3.40867 | gap 1, overlap 461462 GCACCCACCAATGAA GCCTTTGCGGC GTT GCC-CAAAGGC ACGGTCGAAAACCTG Atu0472 461200 - 461757 + | hypothetical protein TERM 614 461782 - 461812 + T 93 -11.9 -4.36914 | gap 1, opp_overlap 461785, overlap 461785 GGATTGGTCCAATAA AAAGGCTGG-CCCG TGAA CGGGACCAGCCTTA TTTTCTGACACCGGG TERM 615 461785 - 461809 + T 100 -13.6 -4.30995 | gap 1, opp_overlap 461785, overlap 461782 TTGGTCCAATAAAAA GGCTGG-CCCG TGAA CGGGACCAGCC TTATTTTCTGACACC TERM 616 461809 - 461785 - T 100 -13.6 -5.06414 | gap 1, opp_overlap 461785 461782 TTGGTCCAATAAAAA GGCTGG-CCCG TGAA CGGGACCAGCC TTATTTTCTGACACC Atu0473 462760 - 461846 - | hypothetical protein TERM 617 462480 - 462453 - G 71 -8.4 -4.08216 | overlap 462454 TTACCCGGGCGAAAA TCGATGCCGACA AGCT TGTCGACACCGG TCACATCCATGCTCT TERM 618 462671 - 462681 + g 76 -5.4 -4.62471 | overlap 462658 CCGTTTGGAAGTCGT CCAA CCC TTGG TTTTTGACGCTTCCA Atu0474 462837 - 463382 + | RNA polymerase sigma factor TERM 619 463500 - 463521 + G 71 -5.7 -4.4017 | overlap 463502 463519 GCGAATTACGGGCGG CAATCGCGG CAAG CCGCGAGCG TTTTCTACCGCTTGA TERM 620 463701 - 463660 - g 88 -2.1 -5.5208 | gap 1, opp_overlap 463664 463665, overlap 463661 CGACAATAGAAAAAA CGGATGGCGGTCGATCGCCG TTT CCGCAATTG-CCGCAACCCT CGTTCTTGCCGCGGG Atu0475 463379 - 464083 + | hypothetical protein TERM 621 465054 - 465038 - g 70 -3.5 -4.71426 | opp_overlap 465039, overlap 465039 CGGCGAGGAAGAAAA GGCTGGC CAT GCCGGCT CGGTTCAACCCGCGA aqpZ 464352 - 465077 + | aquaporin Z Atu0477 465100 - 465423 + | hypothetical protein TERM 622 465452 - 465491 + T 70 -10 -3.36273 | opp_overlap 465450 465452, overlap 465456 CTTTAGATAAAATGA CGGACCTTGCCGGAGGAA GAGC TTCGTTCGGCAAGGTGGG TTGATGTTACACGCA TERM 623 465456 - 465487 + T 78 -13.8 -2.60512 | opp_overlap 465452 465450, overlap 465452 AGATAAAATGACGGA CCTTGCCGGAGGAA GAGC TTCGTTCGGCAAGG TGGGTTGATGTTACA TERM 624 465569 - 465579 + T 85 -4.6 -5.14563 | ATCATCGGCTAAAAC GGCG GGA TGCC TTTTTTGCTGACCGA Atu0478 467182 - 465635 - | glycosyltransferase TERM 625 465677 - 465693 + g 71 -8 -4.13767 | ATGCGGCGTCTTGTT CCAGAC GAAAG GTCTGG TTTTAAGCTCCACCA TERM 626 467125 - 467110 - G 70 -3.2 -4.58283 | CAAGTTCGTCAAAAA GATGCG GAAG CTCATC CAATATGTTTGTGAG TERM 627 467458 - 467442 - H 70 -5 -4.47551 | opp_overlap 467441 467450 AGCGAACGGAGAAAA CGGGTC TGTCC GGCCCG GCTTTGTTCGGCAGA TERM 628 468172 - 468182 + G 77 -3.2 -5.00616 | CGCGGCACGAACAGA TGCT GAA AGCG TTTTTTCCAAAAGCC Atu0479 467742 - 468503 + | ABC transporter, substrate binding protein (amino acid) Atu0480 469733 - 468531 - | polysaccharide biosynthesis protein TERM 629 468914 - 468899 - G 79 -9 -4.25104 | opp_overlap 468898 468899 CGGTTGCGATGAAAA GTGCTG CCTT CAGCAC ATTATAAGCGCGCCC TERM 630 469500 - 469476 - G 70 -4.9 -4.57569 | opp_overlap 469484 CGAGGTCGGGAAAAA CACCGGGATCG TCA CCATGCCGATG ATTGTCAGCACCACG TERM 631 469904 - 469893 - H 77 -7.2 -4.27316 | TCCGCGAACTGAAAA GCCG CAAC CGGC CAATATTATGAAAGC TERM 632 470178 - 470188 + G 100 -2.4 -5.86061 | overlap 470163 CTCTTGCCGGCGGCC GGCG CGA CGCG TTTTTTTTCGTCGCC TERM 633 470442 - 470459 + G 74 -3.3 -4.82128 | GTACCTCGCTGCAGC GCCTGGT CTTC ACCGCGC TTTTATGTTTCATCA exoQ 470111 - 471406 + | exopolysaccharide production protein TERM 634 471831 - 471819 - g 79 -9.1 -4.25104 | opp_overlap 471818 471817 471810 TGCGTTCGACGAAAA TCGGC ACA GCCGA AATTTCTCCGTTCCT Atu0482 471433 - 472185 + | polysaccharide deacetylase c1 472897 - 472247 - | bacteriophage repressor protein C1 TERM 635 472499 - 472516 + g 82 -12.7 -3.59979 | CTCGCCCTGCACTTC CAGGGCG TAGA CGCCCTG TTTGCGCTCGGGAGA Atu0484 473660 - 473010 - | two component response regulator Atu0485 473913 - 474266 + | hypothetical protein TERM 636 475017 - 475055 + G 74 -10.9 -3.53012 | gap 1, overlap 475050 CGCTCTCACGCGAAG GCCTG-CGCCCTGGTCCC CACA GGGGCGAGGCCGGCGGGC TTTCGGGCAAGCCGC pyrD 474266 - 475357 + | dihydroorotate dehydrogenase 2 Atu8129 475891 - 475394 - | hypothetical protein Atu0488 476159 - 475893 - | hypothetical protein TERM 637 477216 - 477244 + G 100 -14 -5.07486 | opp_overlap 477219 AACCACCATTCGCAA GGATGCCGGAAA ACCCC TTTCCGGCATTC TTTTTCTTGCCCGTG Atu0489 476434 - 477270 + | methyltransferase TERM 638 477321 - 477335 + F 74 -2.1 -5.0538 | GCTTGCTTACGTATC CATCT TGATC AGGTG TTTTTTGCAGTGCAA Atu0490 477406 - 478017 + | hypothetical protein Atu0491 478100 - 478741 + | hypothetical protein TERM 639 478747 - 478720 - T 100 -18.6 -4.1347 | CGTCAATCACAGAAA CGACCGCTACAT CGCC ATGTAGCGGTCG GCCGTTGCGGTCAGG Atu0492 479229 - 478768 - | hypothetical protein TERM 640 478915 - 478889 - G 73 -4.5 -4.62069 | gap 2, overlap 478891 TCCTCATCGGAAAAA TG-CGCCCTC-AG CGT CTCGAAGGCGTCA TCCGGCGCGCCGGTT Atu0493 479840 - 479337 - | hypothetical protein TERM 641 480166 - 480200 + G 77 -7.6 -4.38712 | GCGTCGCTCACCGAT CTGGCGGAGCGCGGCA AGG TGCCGCCCGGCTCCGG TTTTGTCGGCGTGCA lhr 480100 - 482478 + | large atp-dependant helicase-related protein Atu0495 482513 - 483241 + | hypothetical protein Atu0496 483701 - 483264 - | hypothetical protein Atu8130 484650 - 483859 - | hypothetical protein Atu0498 485609 - 484683 - | hypothetical protein TERM 642 485714 - 485697 - RH 86 -10.5 -4.07568 | opp_overlap 485697, overlap 485700 CTTTCTGTCTGAAAA GACCGGG CATG CCCGGCC TTCATCCGTCATGCC TERM 643 485830 - 485862 + rH 70 -9 -3.63837 | opp_overlap 485818 485838 TTACCGCGCCGGGTG CGGCGAAAGCGGCC AAGGC GGCCGCTTCAGCGG TTCTTCAAGGCTTAT TERM 644 485854 - 485838 - RH 77 -11.5 -3.53012 | opp_overlap 485830 CCGGGTGCGGCGAAA GCGGCCA AGG CGGCCGC TTCAGCGGTTCTTCA Atu0499 489620 - 485874 - | hypothetical protein TERM 645 486832 - 486879 + gH 73 -10.5 -3.39482 | opp_overlap 486832 TCCACGGCGGGAACA TCG-GCAACCGGCGGCTCGTCCG GCAA CGG-CGCGCCGCCGATGGTGCGA TTGTCAATGATGTTC TERM 646 486897 - 486909 + gH 90 -10.5 -4.23054 | overlap 486904 GTCAATGATGTTCTG CGCCG GTG CGGCG TTTTCGATGCTGTCT TERM 647 487408 - 487388 - GH 75 -11.1 -3.37796 | GGCCAGCAGGCAGAA CGTCGATCG GAT CGAGCGACG GGGCGGGCTCAACCT TERM 648 487676 - 487623 - GH 100 -21 -2.87132 | gap 1, opp_overlap 487641, overlap 487640 487641 CTCTTCGGCGATATA GCCGTCTGCCGGGAAAACGGCGGCC GGCAT GGCCGC-GTCTTCGCGGCTGGCGGC AACCATGTGCTGCGC TERM 649 487681 - 487640 - GH 74 -7.2 -4.07568 | gap 2, opp_overlap 487641, overlap 487623 487641 CGTCTGCCGGGAAAA CGGCGGCCGGCATGGCCGCG TCTT CGCGGC--TGGCGGCAACCA TGTGCTGCGCGACGT Atu0500 489550 - 489831 + | hypothetical protein acd 489997 - 491793 + | acyl-CoA dehydrogenase Atu0502 491832 - 493040 + | acetyl-CoA acetyltransferase TERM 650 493507 - 493484 - g 75 -8 -4.28651 | opp_overlap 493484, overlap 493478 493477 493476 ACGAAAAGGCGAAAA GCCCCGACGC TGCC GCGGCGAAGC TGTTCGAACTCGTCG TERM 651 495089 - 495067 - g 84 -9.8 -4.15788 | AAGCCCGCCAAGAAA TCCCTCTGGC CCG GCCTGAAGGA CCTCTATCCGCAGCA fadB 493225 - 495441 + | enoyl-CoA hydratase TERM 652 495481 - 495464 - f 81 -12.7 -3.11812 | opp_overlap 495464, overlap 495450 AGCCAGATCATCGAA CAGGCCC TTCG GGGCCTG TTTTATTATGTGGAT TERM 653 495464 - 495481 + F 100 -12.7 -4.84914 | opp_overlap 495450 495464 AGCCAGATCATCGAA CAGGCCC TTCG GGGCCTG TTTTATTATGTGGAT Atu0504 495598 - 496029 + | hypothetical protein Atu8010 496071 - 496277 + | hypothetical protein Atu0506 496545 - 497132 + | hypothetical protein phaG 497486 - 497142 - | putative monovalent cation/H+ antiporter subunit G phaF 497764 - 497483 - | putative monovalent cation/H+ antiporter subunit F phaE 498246 - 497761 - | putative monovalent cation/H+ antiporter subunit E phaD 499889 - 498246 - | putative monovalent cation/H+ antiporter subunit D TERM 654 498954 - 498940 - G 72 -2.7 -4.78752 | overlap 498932 498941 ACCAGAACCGAAAAA CCGGC CAGCC GCCCG AGCGCCTGCGACGCC phaC 500224 - 499889 - | putative monovalent cation/H+ antiporter subunit C phaA 503142 - 500224 - | putative monovalent cation/H+ antiporter subunit A TERM 655 501034 - 501062 + g 72 -13.2 -2.64375 | gap 1, opp_overlap 501026 501025, overlap 501025 501036 CAGGAAGTCCCGGGC GCGGCGAAGCTGC GCCG GCAGC-TCGTCGC TGCTATCGACCTTTT Atu0513 503625 - 503248 - | hypothetical protein TERM 656 503766 - 503750 - H 75 -5.7 -4.58395 | opp_overlap 503730 503728, overlap 503751 CGCAGGCCGGAAAAA CCGGCCG GAG CGTCCGA TTCCTTTTCGTTTTT TERM 657 503956 - 503974 + H 81 -6.7 -4.68846 | GACGCCGCACTGCCG TACCGGG CTCGA TCCGGTA TTTTCGTTTCTTGGT Atu0514 504030 - 505736 + | methyl-accepting chemotaxis protein Atu0515 505736 - 506035 + | hypothetical protein TERM 658 506329 - 506307 - g 71 -6.8 -4.20868 | overlap 506304 506308 TGCGGAAAAGAAGAA CCGCGCCCGC CAG GCCGGTGCGA CCGGCTGGATCGTCA cheY 506032 - 506397 + | chemotaxis receiver protein TERM 659 506593 - 506609 + G 79 -7.9 -4.56597 | TGGTCTCGATGATCT CGTGGCC TTC GCCCACG TTTTTGAAACGACCC TERM 660 507446 - 507415 - g 84 -10.1 -4.18018 | gap 2, overlap 507416 TGCCGCTATCGAAAA GCGC-GAGGC-GGCG GCAG CGCCGGCCGCAGCGC AGGCGAACGCCAATG cheA 506474 - 508687 + | chemotaxis protein histidine kinase cheR 508701 - 509609 + | chemotaxis methyltransferase TERM 661 510456 - 510482 + G 71 -7.9 -4.11216 | gap 1 GTGTCATCTTGACCG GCATGGGCCGCG ATGG CGCGGCCGG-GC TTTTGAAAATGCGCC cheB 509606 - 510661 + | chemotaxis-specific methylesterase cheY 510661 - 511050 + | chemotaxis receiver protein cheD 511047 - 511592 + | chemoreceptor glutamine deamidase CheD Atu0522 511607 - 511990 + | hypothetical protein TERM 662 513034 - 513015 - g 85 -12.8 -3.78351 | AGAAATCCCAGGAAA CGCAGCCG GATA CGGCCGCG ACCGTGGAGCAGAAC fliF 512099 - 513799 + | flagellar MS-ring protein TERM 663 513834 - 513801 - f 72 -11.8 -2.71146 | opp_overlap 513809, overlap 513803 513809 AAAAAGCAGCATAAT GACAAAAAGGCCGG TTTTAC CCGGCCTTTTTTCC GTTTCTGGGGTTTTT TERM 664 513809 - 513826 + F 100 -9.8 -5.24449 | opp_overlap 513803 513801 513809 GCATAATGACAAAAA GGCCGG TTTTAC CCGGCC TTTTTTCCGTTTCTG TERM 665 513826 - 513809 - f 100 -9.8 -5.01535 | opp_overlap 513809, overlap 513803 513801 GCATAATGACAAAAA GGCCGG TTTTAC CCGGCC TTTTTTCCGTTTCTG TERM 666 514281 - 514259 - g 74 -5.5 -4.57569 | gap 1 TCAGCTTGCTAAAAA CGTC-GCAGC CACG GCTGCTGCCG GTAACGTTGCAGGCG luxR 514221 - 514901 + | LuxR family transcriptional regulator TERM 667 515129 - 515110 - g 71 -7.8 -4.11216 | CTGCGAGCTGGAAAA CTGGGGCA TGAA TGCCGCAG AACAGAGCGCGCAGT agrR 514901 - 515656 + | LuxR family transcriptional regulator TERM 668 515697 - 515708 + F 74 -7.2 -4.14243 | opp_overlap 515697 515696, overlap 515682 TTAAGCCGGTCAAAC GCCC GGCT GGGC TTTTGCACTCCGCTA mclA 515805 - 517652 + | methyl-accepting chemotaxis protein TERM 669 517680 - 517703 + T 100 -14.6 -5.06414 | opp_overlap 517679 TGAAAGTCAATGCAG CTCCCGGATC GCAA GGTCCGGGAG TTTTTATTCGGCCGC Atu0527 521216 - 517707 - | two component sensor kinase/response regulator hybrid TERM 670 518232 - 518213 - G 75 -13.6 -2.90496 | overlap 518210 CGGGGGTGGAAATGA GCTGCACC GGAT GGTGCAGC ATGCGTGATAGCCGA TERM 671 518899 - 518911 + g 73 -9.1 -3.93026 | GTGCGTTCCTCCACG CGCTG CTC CAGCG TTTCATTCGCCTGTT TERM 672 520220 - 520198 - G 78 -4.8 -4.82901 | overlap 520199 GTCGCCGCAGAAAAA CCGCCGATGA AGG TGATCAGCGA GACAACAGGCATCTG TERM 673 521565 - 521599 + G 76 -10.6 -3.8211 | opp_overlap 521560 521559, overlap 521564 521567 ATTTAAAACCTTCAT TGCCCGCGGCAATGTC ATG GACCTGGCCGTGGGTG TTATTATCGGTGCGG TERM 674 521567 - 521597 + G 86 -13.2 -3.49568 | opp_overlap 521560 521559, overlap 521564 521565 TTAAAACCTTCATTG CCCGCGGCAATGTC ATG GACCTGGCCGTGGG TGTTATTATCGGTGC TERM 675 521906 - 521895 - g 70 -3.6 -4.71776 | overlap 521896 521897 GAAGATTGAAGAAAA GCCG GACG CAGC TCCGCCGCCGGAAGA mscL 521539 - 521967 + | large conductance mechanosensitive channel protein TERM 676 522064 - 522046 - f 82 -5.3 -5.0065 | GATCCATAAAGAAAA TCCATGA TCGCC TCACGGA ATATCATGCACATGG TERM 677 522145 - 522176 + G 72 -11.6 -3.31792 | gap 1, overlap 522148 522149 TTTGAACAGTCTGAG TGCGCGCTCTCTGGC AGC GCCCGAGAGCG-GTA TTGTCGAAGTCGTGA TERM 678 522148 - 522174 + G 74 -12.2 -3.22653 | overlap 522145 522149 GAACAGTCTGAGTGC GCGCTCTCTGGC AGC GCCCGAGAGCGG TATTGTCGAAGTCGT TERM 679 522149 - 522173 + G 78 -15.7 -2.53271 | overlap 522148 522145 AACAGTCTGAGTGCG CGCTCTCTGGC AGC GCCCGAGAGCG GTATTGTCGAAGTCG aspB 522122 - 523288 + | aspartate aminotransferase TERM 680 523741 - 523755 + G 100 -12.8 -5.0916 | overlap 523742 GTCGCGCTGGGCAGT CGCGCC AGC GGCGCG TTTTTATCTTGGAGA TERM 681 523943 - 523897 - g 71 -6.5 -4.28045 | gap 1, opp_overlap 523902 523914, overlap 523894 523899 ATATTACGAAAACAA TACCGGCACGACCCGC-GCG CTTGTTGC CGCGGCGGTTCGCAGCGGCA TCCGCAATTTCATCT galE 523619 - 524650 + | UDP-galactose 4-epimerase TERM 682 524662 - 524676 + T 77 -7.8 -4.25104 | overlap 524661 CTGAGCCGTCTTTAT GTCACG GGA CGTGGC TTTTCGTGACGGAAG Atu0531 525415 - 524663 - | hypothetical protein Atu0532 525809 - 525399 - | hypothetical protein TERM 683 525789 - 525776 - G 70 -3.8 -4.65916 | GCGATCCGAACAAAA GGGA TAGTTT TCCC GCGTCGACGGCCGGC maf-2 526505 - 525882 - | Maf-like protein TERM 684 526111 - 526129 + g 73 -4.5 -4.65895 | AAACGCACCTTGGTC TCCGCCA CCTTC TGACGGA TTTTTCCGTCAGGCG infA 526838 - 526539 - | translation initiation factor IF-1 Atu0535 527390 - 526902 - | hypothetical protein TERM 685 527356 - 527337 - G 71 -7.8 -4.05747 | CATACCGCACATAAA GAGGACCG ATTT CGGTGCTC GTCCCTCGTTTGGCG Atu0536 527866 - 527393 - | hypothetical protein hisD 529168 - 527870 - | histidinol dehydrogenase TERM 686 529281 - 529300 + r 93 -12.2 -4.23213 | opp_overlap 529280 529275 GCAAGGAAAGGCAAC CGTTGCGA GGGC TCGCAACG TTTATTCGCTGTCGG Atu0538 529742 - 529302 - | hypothetical protein murA 531148 - 529856 - | UDP-N-acetylglucosamine 1-carboxyvinyltransferase Atu0540 531517 - 531251 - | hypothetical protein TERM 687 531631 - 531618 - R 73 -5.3 -4.56597 | overlap 531622 TGCGCTCGTCAAAAA CCTAT GGCA ATAGG CCGCCACGCTTGATG TERM 688 531868 - 531847 - R 100 -13.7 -4.35524 | GCGTCAAATGGAAAA CCGCGCCTC TTGC GAAGCGCGG TCTCCATATCCGAAT TERM 689 531931 - 531913 - R 72 -11.7 -2.84229 | opp_overlap 531925, overlap 531912 AGAGCGGGACGAAAC CGCCCGT AGCCA ACGGGCG CCGCTTACTGGCGGA fla 532877 - 531936 - | flagellin TERM 690 533069 - 533098 + r 91 -12.1 -4.13945 | opp_overlap 533075, overlap 533075 AGGTAAGAGCACAAA CAAAAACCGCGCC TTTC GGCGCGGTTGATG TTTTCGGCTGCAGCT TERM 691 533075 - 533092 + r 95 -14.1 -3.54181 | opp_overlap 533075, overlap 533069 GAGCACAAACAAAAA CCGCGCC TTTC GGCGCGG TTGATGTTTTCGGCT TERM 692 533092 - 533075 - R 100 -14.1 -5.40464 | opp_overlap 533075 533069 GAGCACAAACAAAAA CCGCGCC TTTC GGCGCGG TTGATGTTTTCGGCT flaB 534081 - 533119 - | hypothetical protein Atu0544 534364 - 534107 - | hypothetical protein TERM 693 534357 - 534322 - G 100 -14 -5.82388 | opp_overlap 534320 534346, overlap 534324 534327 AAAGTTTAAAAAAAA GATAAGGCCGCATCCG TTTC CGGATGCGGCCTCGTG GATGCATTCAGTCCG TERM 694 534355 - 534324 - G 100 -16.6 -4.53853 | opp_overlap 534320 534346, overlap 534322 534327 AGTTTAAAAAAAAGA TAAGGCCGCATCCG TTTC CGGATGCGGCCTCG TGGATGCATTCAGTC TERM 695 534352 - 534327 - G 100 -20.5 -4.34951 | opp_overlap 534320 534346, overlap 534324 534322 TTAAAAAAAAGATAA GGCCGCATCCG TTTC CGGATGCGGCC TCGTGGATGCATTCA flaA 535408 - 534488 - | flagella associated protein TERM 696 535736 - 535713 - R 90 -10.2 -4.28651 | gap 1, overlap 535706 ACTAAAATGCGAAAA CCCCGC-GGCC TTG GGCGTGCGGGG TTAAAAAACAGGGTT fliP 536517 - 535780 - | flagellar biosynthesis protein FliP TERM 697 536521 - 536509 - G 71 -6.3 -4.31433 | overlap 536514 GATGGTTACAAGAAA TCGAA TCA TTCGA TGACAAAGGTCCGGA fliL 537014 - 536514 - | flagellar protein flgH 537760 - 537041 - | flagellar basal body L-ring protein TERM 698 537395 - 537409 + g 89 -11.4 -4.28432 | CGCATCCGGCGTCCA GCCCAG GAT CTGGGC TTTTGCCTTCCAGTT Atu0549 538293 - 537757 - | hypothetical protein TERM 699 538023 - 538033 + g 71 -8.2 -4.07568 | overlap 538030 GCCAGTCCTCATATT CCGC CTT GCGG TTTTCCAGCACGGAA flgI 539411 - 538290 - | flagellar basal body P-ring protein flgA 539896 - 539408 - | flagellar basal body P-ring biosynthesis protein FlgA TERM 700 539820 - 539782 - G 73 -13.8 -2.73364 | gap 1, overlap 539805 TGCGCACGGGAACCA GCGCCATTGGCGCCTGC GCAAGA GCGGGCGCC-AGGGCGC CCAGTGAAAAGGCAG flgG 540705 - 539917 - | flagellar basal body rod protein FlgG fliE 541062 - 540724 - | flagellar hook-basal body protein FliE flgC 541478 - 541059 - | flagellar basal body rod protein FlgC flgB 541874 - 541482 - | flagellar basal body rod protein FlgB TERM 701 541999 - 542022 + r 83 -7.3 -4.56597 | opp_overlap 542000, overlap 542000 CCTCACAAACAAAAA AGCGCGCCG GATGTG TGGCGCGCC TTTTTAGCGGGGAGA TERM 702 542000 - 542021 + r 73 -10.8 -3.33744 | opp_overlap 542000, overlap 541999 CTCACAAACAAAAAA GCGCGCCG GATGTG TGGCGCGC CTTTTTAGCGGGGAG TERM 703 542021 - 542000 - R 100 -10.1 -5.72622 | opp_overlap 541999 542000 CTCACAAACAAAAAA GCGCGCC GGATGTGT GGCGCGC CTTTTTAGCGGGGAG Atu0556 542449 - 542045 - | hypothetical protein fliI 544034 - 542613 - | flagellum-specific ATP synthase flgF 544780 - 544046 - | flagellar basal body rod protein FlgF Atu0559 545417 - 544782 - | hypothetical protein motA 545748 - 546620 + | flagellar motor protein MotA fliM 546623 - 547582 + | flagellar motor switch protein fliN 547646 - 548185 + | flagellar motor switch protein FliN fliG 548213 - 549256 + | flagellar motor switch protein G TERM 704 549338 - 549359 + F 100 -15.1 -4.56978 | opp_overlap 549337 549334 TAGTTTCGAAATGAC GGCCTGCCG GGAT CGGCGGGCC TTTCTTATTTCGGGA TERM 705 549450 - 549436 - g 85 -2.7 -5.31456 | overlap 549425 CCAACGGAGAAAAAA CTCCG TGATG CGGCG GAAAAGGGCAATCTG flhB 549382 - 550464 + | flagellar biosynthesis protein FlhB Atu0565 550470 - 550907 + | hypothetical protein TERM 706 550936 - 550972 + F 100 -11.7 -4.57341 | gap 1, overlap 550937 CACAAATTTCCATCA TGTCCGTTGCGCTCGT TGAATC ACGGGCGCAACG-ACG TTTTTCCGGCGCGTT TERM 707 550937 - 550971 + F 84 -13 -3.33922 | gap 1, overlap 550936 ACAAATTTCCATCAT GTCCGTTGCGCTCGT TGAATC ACGGGCGCAACG-AC GTTTTTCCGGCGCGT TERM 708 551155 - 551182 + G 90 -5.4 -5.28826 | overlap 551146 551168 CGATACGCATGATGC TCCTGCTCGTTG TCGG CACCGCGCCGGA TTTTTTCTGAAATTT Atu0566 550988 - 551200 + | hypothetical protein flaD 551215 - 552507 + | flagellin protein FlaD TERM 709 552724 - 552749 + F 74 -7.5 -4.08939 | opp_overlap 552716 CCAGGAAGAGTGGAC GCCGGTTTTCC GTCT GGAAATACGGC TTTCTCTCCCTGTTG TERM 710 552965 - 552955 - g 70 -3.2 -4.66833 | opp_overlap 552959 GCGGAAGGGGAAAAA CAGG CGG CCTA TGCCCGTGGTTACGA Atu0568 552787 - 553443 + | hypothetical protein motB 553440 - 554741 + | flagellar motor protein MotB TERM 711 555583 - 555612 + G 70 -9.9 -3.53012 | opp_overlap 555600 GCTGGCGCGCATGGC GGCGGTGAAGGCG AAGA CGCTTTCTCCGGC TTTGCCGGGCACACC TERM 712 555968 - 555937 - g 71 -8 -4.08216 | gap 1 CGATGCGGGCGAAAA TG-TCCGGCAACTCG TGA CGAGTGGCCGCAGCA AGCTCGATGAAATCG Atu0570 554738 - 556018 + | chemotaxis protein TERM 713 556638 - 556620 - g 76 -5.8 -4.59853 | opp_overlap 556637, overlap 556609 556625 GGAACTCGCCAAAAA CGAGACGG ACA CCGGCGCG GAAGGCGGCAACGAT TERM 714 556681 - 556701 + G 72 -13.9 -2.55351 | overlap 556680 556683 CGTTTCTCCTCCTCC CGCTCGGGC ACG GCCCGCGCG CTTGATATGGGCACG motD 556015 - 557364 + | chemotaxis MotD protein Atu0572 557435 - 557878 + | hypothetical protein Atu0573 558161 - 558832 + | transcriptional regulator TERM 715 558841 - 558853 + F 71 -4.8 -4.56775 | overlap 558844 GCAATGATTTTCATT GACC CGCGT GGTC TTTTTCAAACGCGGT TERM 716 560037 - 560056 + G 73 -9.2 -3.93288 | GTGTCGTTACCATTG GCTTCCCG CAAT CGGGCAGC TTTGGTTACATCCAG flgE 558938 - 560215 + | flagellar hook protein FlgE TERM 717 560328 - 560318 - g 70 -4 -4.59773 | CGTTACTTCGAAAAA CATT GCC AATG TCGGTAATGCGAACT TERM 718 561569 - 561549 - g 79 -8.2 -4.5287 | GCAAACGAAGCAAAA GGCGCGCT TTATG AGCGCTCC GCCAAGTCTTACTCG flgK 560238 - 561716 + | flagellar hook-associated protein FlgK TERM 719 562022 - 562004 - g 74 -11 -3.48807 | overlap 561998 561997 GCAGGAAATCCAGAA GGTGCTGG TCC CCAACACC AGCAGTGAAGCACCG TERM 720 562771 - 562735 - g 71 -6.5 -4.15565 | overlap 562736 CCTACGAGGCGAAAA CCCGTCTCGACCTGCTG CAG CAGCAGATTGAGATAGC ATACAGCCTGACGTC flgL 561720 - 562823 + | flagellar hook-associated protein FlgL flaF 562858 - 563202 + | flagellar biosynthesis regulatory protein FlaF TERM 721 563333 - 563367 + G 79 -7.7 -4.49556 | gap 1 TGAAAACCACGTTCT GCAGCCCGACCAGGCG ACGA CGCC-GCTCCGGCAGC TTTATTTCATCGCGC flbT 563199 - 563648 + | flagellar biosynthesis repressor FlbT flgD 563639 - 564112 + | flagellar basal body rod modification protein TERM 722 564119 - 564135 + F 81 -13.7 -2.87132 | GGTTCCTGATAGTGA GGCGGCA TGA TGCCGCC TCTATAAAACAAGGA TERM 723 564366 - 564380 + G 83 -4.9 -5.02074 | overlap 564343 CCGCCCCCTTTGTGG GCGCG CAGAT CGTGC TTTTTTCCAACCTCG fliQ 564158 - 564424 + | flagellar biosynthesis protein FliQ TERM 724 564533 - 564555 + F 73 -10.5 -3.40403 | overlap 564531 564530 CCGATGCCCGGAACC GTGCGACGG CTTTT CCGTCGCCC TTCTCATGAAGAGAC flhA 564582 - 566669 + | flagellar biosynthesis protein FlhA TERM 725 567217 - 567232 + G 70 -4.6 -4.56978 | overlap 567219 CTTTTCGATCATGCT GCGGCT GGCG AGCCCC TTTGTTATTTACGGC fliR 566699 - 567421 + | flagellar biosynthesis protein FliR Atu0583 567437 - 567856 + | hypothetical protein TERM 726 567870 - 567905 + F 71 -8.3 -3.82604 | gap 1, opp_overlap 567891 AGTCTTCCCGTTGTT GCATCGCGGGCGTCTG AAATA CAC-CGTTCGCGATGC TTCTTGATTGAGTGA Atu0584 567999 - 568526 + | hypothetical protein Atu0585 568556 - 568924 + | hypothetical protein Atu8132 568924 - 569457 + | hypothetical protein TERM 727 569612 - 569579 - f 87 -13.7 -3.27617 | opp_overlap 569576 569587 569599 569600, overlap 569567 TAACAAACTCATGAA CCACCGCCCCGCAGG CCAT CCGCCGGGCCGGTGG CGATCGGTTTGGCAT tagA 569641 - 570315 + | teichoic acid biosynthesis protein TERM 728 570760 - 570776 + G 74 -12.3 -3.21099 | opp_overlap 570759 570758 TCTGAAGCTGAAACC CGCCGAT ATG ATCGGCG TTCGTAATCAGGGCG TERM 729 571296 - 571328 + G 73 -10.5 -3.68619 | opp_overlap 571298 571300, overlap 571298 AGGATGTCAGGCAAA AACAGGCGAGTGCCA GCA TGGCGCTTGCCGGTG TTTCCGTGGATTACG TERM 730 571298 - 571326 + G 79 -13.1 -3.42283 | opp_overlap 571298 571300, overlap 571296 GATGTCAGGCAAAAA CAGGCGAGTGCCA GCA TGGCGCTTGCCGG TGTTTCCGTGGATTA TERM 731 571326 - 571298 - g 85 -8.7 -4.66609 | opp_overlap 571298 571296, overlap 571300 GATGTCAGGCAAAAA CAGGCGAGTGCCA GCA TGGCGCTTGCCGG TGTTTCCGTGGATTA TERM 732 571324 - 571300 - g 78 -9.9 -3.94812 | opp_overlap 571298 571296, overlap 571298 TGTCAGGCAAAAACA GGCGAGTGCCA GCA TGGCGCTTGCC GGTGTTTCCGTGGAT TERM 733 571693 - 571742 + G 84 -11.9 -4.08974 | gap 1, overlap 571684 CCGCGACCTGACCCA GGCCGCCATGCTGGC-GGGCGGCG GCG CGTTGCTCGGCCTGCTGGGCAGCC TTTATCTGCTCAGCT Atu0588 570443 - 572206 + | hypothetical protein folD 572284 - 573183 + | methylenetetrahydrofolate dehydrogenase aglR 574226 - 573201 - | transcriptional regulator repressor TERM 734 574272 - 574262 - H 74 -6.8 -4.25104 | GCGCGCTCAGGAAAA GGCT AAA AGCC ACTCCTCACATTCCC aglE 574504 - 575865 + | ABC transporter, substrate binding protein (alpha-glucoside) TERM 735 575892 - 575902 + F 71 -4.6 -4.66163 | opp_overlap 575883 GCAAATTCCGGAAAA CCGT TCT GCGG TTTTTCGATCAAGAT TERM 736 575953 - 575930 - f 100 -15.2 -4.57073 | opp_overlap 575930 GATCTGCGGTAAAAA GGCCCGGCGG CTTG CTGCCGGGCC TCATTGAAGGAACTG TERM 737 575930 - 575953 + F 91 -17.4 -2.71144 | opp_overlap 575930 GATCTGCGGTAAAAA GGCCCGGCGG CTTG CTGCCGGGCC TCATTGAAGGAACTG aglF 576114 - 577034 + | ABC transporter, membrane spanning protein aglG 577036 - 578196 + | ABC transporter, membrane spanning protein aglA 578234 - 579889 + | alpha-glucosidase TERM 738 580276 - 580228 - g 71 -5.8 -4.41494 | gap 1, opp_overlap 580252, overlap 580231 GATCGCCAAGGAAAA CAAGCAGGAGATCGACCGCCGCG TTCG CGCCGCTGCCGAAATCCTGCA-G CTGACGCAATATCTG TERM 739 580274 - 580231 - g 100 -13 -4.32402 | opp_overlap 580252, overlap 580228 CGCCAAGGAAAACAA GCAGGAGATCGACCGCCGCG TTCG CGCCGCTGCCGAAATCCTGC AGCTGACGCAATATC aglK 579911 - 580999 + | ABC transporter, nucleotide binding/ATPase protein TERM 740 581006 - 581049 + F 100 -18.4 -5.11613 | opp_overlap 581016 CGCCCATAAGGGACC GAAATAAAAACCCCGGAACA TCCC TGTTCCGGGGTTTTTATGGC TTTTTTGCCTCCTGT TERM 741 581039 - 581016 - f 100 -16.8 -5.30616 | opp_overlap 581006 GGACCGAAATAAAAA CCCCGGAACA TCCC TGTTCCGGGG TTTTTATGGCTTTTT Atu8133 581170 - 581589 + | hypothetical protein Atu0597 582976 - 581615 - | hypothetical protein TERM 742 581930 - 581916 - G 74 -11.4 -3.41878 | GCGTTGAAGTCATAA CGGCGA ATG TCGCCG TTCGGCAGGCCCGCA TERM 743 583102 - 583092 - R 87 -8.2 -4.65032 | overlap 583093 GAAATGAGAAATAAA GCGG TTT CCGC ACCGGATCGTCAGGG TERM 744 583194 - 583149 - R 80 -9.1 -4.12188 | gap 1, opp_overlap 583160, overlap 583160 GGACGATGCGCAAAA CAGGGTTGAAAGGCGAAAACCG CAT CGGTCTTCGCCTTTCAGGA-TG TCAATGGAAGAGAAC TERM 745 583184 - 583160 - R 100 -16.5 -3.58731 | opp_overlap 583160, overlap 583149 AAAACAGGGTTGAAA GGCGAAAACCG CAT CGGTCTTCGCC TTTCAGGATGTCAAT TERM 746 583160 - 583184 + r 95 -14.3 -3.5944 | opp_overlap 583160 583149 AAAACAGGGTTGAAA GGCGAAAACCG CAT CGGTCTTCGCC TTTCAGGATGTCAAT edd 585015 - 583195 - | phosphogluconate dehydratase pgl 585838 - 585140 - | 6-phosphogluconolactonase TERM 747 585713 - 585695 - G 80 -3.1 -5.01732 | gap 1 AAGCGCCTGAAAAAA CAGCTTCG GTGT CGA-GCCG CCTGAGACCGCAATG zwf 587324 - 585849 - | glucose-6-phosphate 1-dehydrogenase ordL 588747 - 587461 - | oxidoreductase TERM 748 588140 - 588153 + g 76 -9.5 -4.07568 | TAGATGTCGGCGCCT GCGGC CTTC GCCGC TTTTGCAAGCCCGAC glnA 590199 - 588760 - | glutamine synthetase TERM 749 589510 - 589533 + g 70 -5.2 -4.57073 | GCCTTCCTCGTGGAT CAGCGTATCG ATCT CGAGACCCTG TTTTTCCGAGAAATG TERM 750 590151 - 590183 + g 85 -2.7 -5.40072 | gap 1 GAGGAGACTTCTTTG CCATGGT-TGCCTG TTTCTT CGGGCGGAGCATGG TTTTTTTGGCGGGCA TERM 751 591233 - 591221 - g 71 -6.9 -4.15222 | ATGTGGTCGAACAAA CCGGC ATC ACCGG CAATCTCGCCGATAT Atu0603 590323 - 591507 + | hypothetical protein TERM 752 591592 - 591568 - T 71 -10.7 -3.20747 | overlap 591559 591569 591572 ATCAAATGCCAGCAA GGCAGGATCAC CCA GTGATCCCGCT GCACATGATGTCCTG TERM 753 591591 - 591569 - T 81 -14.2 -2.51966 | overlap 591559 591568 591572 TCAAATGCCAGCAAG GCAGGATCAC CCA GTGATCCCGC TGCACATGATGTCCT Atu0604 591965 - 591618 - | hypothetical protein TERM 754 591986 - 592007 + H 84 -2.8 -5.4387 | CTCTCCTTCTGAATG CGGAGGGC CATGAT GCGCGCCG TTTTTTGATTTATCT TERM 755 592861 - 592823 - g 75 -13.9 -2.96249 | gap 1, opp_overlap 592855 592857, overlap 592807 592804 592803 592820 CGTCATGAACAATGA CGAT-CGCCACCGCCGCG ATAT CAGGACGGTGGCGGATCG GATGACCCGTCTCAT Atu0605 592053 - 592925 + | LysR family transcriptional regulator Atu0606 593198 - 592941 - | hypothetical protein TERM 756 593245 - 593272 + r 78 -6.9 -4.53707 | overlap 593246 593247 TTTGATCCGGTTTGC AAGCCCTTCCC TGTAGT GGGAAGGGCGG TTTTCTCGATTTATT TERM 757 593246 - 593271 + r 71 -10.4 -3.30597 | overlap 593245 593247 TTGATCCGGTTTGCA AGCCCTTCCC TGTAGT GGGAAGGGCG GTTTTCTCGATTTAT TERM 758 593247 - 593270 + r 78 -13.9 -2.57274 | overlap 593246 593245 TGATCCGGTTTGCAA GCCCTTCCC TGTAGT GGGAAGGGC GGTTTTCTCGATTTA aceA 594572 - 593283 - | isocitrate lyase TERM 759 595836 - 595856 + G 70 -10.4 -3.53012 | gap 1, opp_overlap 595822 TGCCGGCAACCGTTT CCGCCTCGC AGGG GCG-GGCGG TTTCCCGAGGGCGCG Atu0608 594823 - 596238 + | transcriptional regulator potF 596390 - 597487 + | ABC transporter, substrate binding protein (putrescine) TERM 760 597496 - 597525 + F 72 -12.2 -2.81547 | overlap 597500 CACCTGATCGGACTT GGGAGAGGGTGG CGCTGT CCACCCTCTTTC TCCTTGATGTCGACG TERM 761 597500 - 597521 + F 88 -11.6 -4.09215 | overlap 597496 TGATCGGACTTGGGA GAGGGTGG CGCTGT CCACCCTC TTTCTCCTTGATGTC potG 597569 - 598726 + | ABC transporter, nucleotide binding/ATPase protein TERM 762 598890 - 598926 + G 85 -6.5 -4.83615 | overlap 598892 CTCCATGCCGCCCTA TACGCCTGTCTTCGAAG GGT TTTCGAAGCTCGGCGAA TTTTTCTCGCAGCTG potB 598738 - 599646 + | ABC transporter, membrane spanning protein Atu0612 599651 - 600463 + | ABC transporter, membrane spanning protein TERM 763 600743 - 600726 - T 86 -14.1 -2.96979 | opp_overlap 600726 AGCACAACTCATACA GGCGGCC GTAA GGCCGCC TTTCTTTTTGCTGAT TERM 764 600726 - 600743 + T 100 -14.1 -4.92756 | opp_overlap 600726 AGCACAACTCATACA GGCGGCC GTAA GGCCGCC TTTCTTTTTGCTGAT Atu0613 602351 - 600771 - | ABC transporter, membrane spanning protein TERM 765 600999 - 600984 - G 74 -7.5 -4.36554 | overlap 600986 CAGGACCAGAAGAAA GGCGG TGAGCG CCGCC GGCCGCATATTCGGC TERM 766 601528 - 601506 - G 74 -3.2 -4.72986 | overlap 601507 GACCGGGATGAAAAA GCCGCTCGCC ACG GGCAGGAAGC AGAACAGGCTTGCGC TERM 767 601605 - 601622 + g 74 -6.2 -4.57341 | overlap 601599 601609 CATGCTCGTCGCTTT CGGCGC GCCAAA GCGCTG TTTTTCCCGGGCATT Atu0614 606538 - 602711 - | two component sensor kinase TERM 768 604271 - 604289 + g 74 -6.6 -4.3739 | opp_overlap 604261, overlap 604274 604285 AGCAACCGGCTTCTC GTCGGTGG TGA CCACCTGC TTTTCTGCAGAAGTG TERM 769 605757 - 605784 + g 74 -11.2 -3.54935 | gap 1, overlap 605753 605752 605759 GGCAGGGCAGGCTCG GC-GGCCGCCGGG ATT TCCTGCGGCCTGC TTTCGGCAACATTTC TERM 770 605759 - 605781 + g 70 -12.6 -2.90615 | overlap 605753 605752 605757 CAGGGCAGGCTCGGC GGCCGCCGGG ATT TCCTGCGGCC TGCTTTCGGCAACAT TERM 771 605991 - 606003 + g 79 -9.1 -4.26076 | opp_overlap 605985 ACGAGATGACCGGAC TGGCC GGC GGCCA TTTTGATGAGCGTGC TERM 772 606931 - 606987 + H 95 -14.8 -3.5518 | gap 2, overlap 606933 606974 CCCACTCAACCGTAC CATTCCCCTCTCCCAGTAAGTTTATATG TCA CA-ATGA-CTTACCGGGAGAGGGGAATA TTCTCTCCCTATTAA TERM 773 606933 - 606985 + H 100 -17.4 -3.3464 | gap 2, overlap 606931 606974 CACTCAACCGTACCA TTCCCCTCTCCCAGTAAGTTTATATG TCA CA-ATGA-CTTACCGGGAGAGGGGAA TATTCTCTCCCTATT TERM 774 607637 - 607609 - g 76 -9.6 -4.07687 | gap 1, overlap 607624 ATTGGCGCGCGAAAA TCGC-GTAACCGC AAAC GCGGCCACCGCGA TCCGCGCGGTCGTGA TERM 775 607636 - 607624 - g 73 -10.5 -3.66178 | overlap 607609 TCGCGTAACCGCAAA CGCGG CCA CCGCG ATCCGCGCGGTCGTG Atu0619 607141 - 608841 + | exopolyphosphatase ftsJ 608838 - 609578 + | cell division protein Atu0621 610976 - 609579 - | MFS permease TERM 776 610755 - 610745 - G 79 -8.2 -4.49389 | opp_overlap 610754 ACCCCACAACGAAAA CGCC GAT GGCG ATGCGGAAGATTTTC Atu0622 611204 - 612187 + | metallo-beta-lactamase superfamily protein TERM 777 612217 - 612235 + F 100 -10.3 -5.48063 | opp_overlap 612216 612217 CAGCAACAGCGAAAG CCCGGAA GGTCA TTCCGGG TTTTTTCTATTCCCT Atu0623 612258 - 612416 + | hypothetical protein TERM 778 612769 - 612759 - g 71 -8.2 -4.07568 | opp_overlap 612759 612760, overlap 612760 TCCGGTGGTCGAAAA CGGC GGT GCCG GCGGCCACAAGAATG guaB 612499 - 613872 + | inositol-5-monophosphate dehydrogenase TERM 779 613863 - 613847 - f 71 -10.1 -3.56568 | CAATCACGCGTGAAA GCCCGAA CTA TCCGGGC GCGGTTTGATCTTTC TERM 780 613915 - 613946 + F 100 -18.1 -4.30576 | AGGCTAGATATTTGG CGCTCCCCGATCT CAAGCC GGATCGGGGAGCG TTTTCATGATGGGGG Atu8134 613968 - 614387 + | hypothetical protein TERM 781 615200 - 615166 - g 74 -5.4 -4.56597 | GGCGCTTGCCAAAAA GCTCGGAGCCGACGTC GTC GTCAACGGCCGCGCGC CTGACGCGGTGGAGC adhP 614537 - 615565 + | alcohol dehydrogenase dlhH 615684 - 616559 + | carboxymethylenebutenolidase Atu0628 618033 - 616678 - | two component sensor kinase Atu0629 618697 - 618020 - | two component response regulator TERM 782 619104 - 619078 - g 70 -4.4 -4.56597 | gap 1, opp_overlap 619078, overlap 619099 619101 CCGTGTCCTGAAAAA CGGCATGGTCG AACGCA CGAACA-GCCG TTTCGACACGACGAC Atu0630 618896 - 619165 + | hypothetical protein TERM 783 619184 - 619208 + T 100 -21.5 -3.35679 | opp_overlap 619157 CCGTGACGATGTCAA GCTCGGCGGTC AGC GACCGCCGAGC TTATGAGTGCGCAGA moaB 619826 - 619257 - | molybdenum cofactor biosynthesis protein B ipk 620722 - 619823 - | 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase TERM 784 619937 - 619915 - G 81 -4.8 -4.93547 | overlap 619904 619917 619925 CGAAGGAATGAAAAA TCCCGAAACA GGT TGCCCCGGAA CCGGACATGCGGACA Atu0633 622573 - 620729 - | hypothetical protein TERM 785 620823 - 620847 + g 83 -2.8 -5.27477 | gap 1 TTTTCAGCGTCCTTT TCGACAGGCGG CAGG CCGT-TGGCGA TTTTTTCCTTCACCT TERM 786 622721 - 622744 + r 95 -14.6 -3.36175 | opp_overlap 622705, overlap 622741 CATCCCGGAACGTCG GGCGGATGGG CCTG TCCATCCGCC TTATGCCTAGGGCTT ispB 623781 - 622765 - | octaprenyl-diphosphate synthase Atu0635 623826 - 624122 + | hypothetical protein TERM 787 624217 - 624231 + F 70 -10 -3.35015 | overlap 624221 624224 GGGGGCACCGGGCGG GCATGG ACG CCATGC TTCTGGCGTCGTTGG Atu0636 624219 - 624929 + | hypothetical protein TERM 788 624949 - 624962 + F 70 -6.7 -4.07885 | CGTTGCAGCGCCATT CGCAA ACCA TTGCG TTTTGCCGGGCGATA sohB 625105 - 625887 + | proteinase sohB Atu0638 625908 - 626102 + | hypothetical protein TERM 789 626316 - 626295 - g 76 -12.3 -3.29144 | gap 1 TTACTGGGCCGACAA GGGCTGC-GC GGT GCTGCAGCCC TACGATATGGAAGTG glyQ 626233 - 627165 + | glycyl-tRNA synthetase subunit alpha TERM 790 627204 - 627230 + F 100 -12.4 -4.74767 | opp_overlap 627192 627202 627209, overlap 627209 AAGTTTCAATAAATT TGAAAGGCCGTT CTT GACGGCCTTTTA TTTTGTGTTGATTGT TERM 791 627225 - 627209 - f 70 -9.4 -3.76534 | opp_overlap 627204 627209, overlap 627202 TCAATAAATTTGAAA GGCCGT TCTTG ACGGCC TTTTATTTTGTGTTG TERM 792 627209 - 627225 + F 100 -10.1 -5.26907 | opp_overlap 627209 627202, overlap 627204 TCAATAAATTTGAAA GGCCGTT CTT GACGGCC TTTTATTTTGTGTTG Atu0640 627263 - 627580 + | hypothetical protein TERM 793 627975 - 627961 - g 85 -5.6 -5.14563 | overlap 627962 CCGCGCATGAAAAAA CCACCT TCG AGGAGG TGATCGCCATGCGCA Atu0641 627774 - 628325 + | hypothetical protein TERM 794 628546 - 628518 - g 84 -10.3 -4.19238 | TCGCCAAGGGCAAAA GCCACTTGTCAGG CGC CCTGAAAAGCGAC GATACGCTTTATATG aroA 628400 - 629677 + | 3-phosphoshikimate 1-carboxyvinyltransferase TERM 795 629674 - 629655 - f 74 -7.1 -4.22524 | overlap 629615 ATACCGAAAAGGAAA GCGCTGC CGAGCC GCAGCAC TGAAGCCATTAGGGA TERM 796 631062 - 631075 + G 74 -5.9 -4.56887 | overlap 631047 631047 GGCGGCATCGTCATG CTGGC CTTT GCCGG TTTTGTGGCTTTTTC Atu0643 629700 - 631637 + | hypothetical protein TERM 797 633218 - 633242 + G 78 -7.1 -4.58395 | TCACTGTTGCTCTCG CCGACAAGC TCGATAC GCTCGTCGG TTTTTGGGCCATCGA glyS 631738 - 633891 + | glycyl-tRNA synthetase subunit beta Atu0645 634124 - 634618 + | hypothetical protein TERM 798 634647 - 634626 - T 100 -15.1 -4.88918 | opp_overlap 634624 634621 CCAGTTGAAACAAAA GCGCCGGAG TTTC CCCCGGCGC CGTTGTTGATAGCCT mcpA 636495 - 634672 - | methyl-accepting chemotaxis protein A TERM 799 635117 - 635093 - G 89 -11.3 -4.15565 | opp_overlap 635092 GCCACCACGGCAAAA CCCTTGCCGGC TTC GCCCGCACGGG CTGCTTCCACGCCGG TERM 800 636511 - 636548 + r 95 -14.1 -3.34398 | overlap 636509 GGGCGCTCGCAAGGT TTGGGATCGCGCGTCGT AAAA ACGCCGCGCGGTACCGA TGTTTCGGAGAGGGG Atu8084 637329 - 636820 - | hypothetical protein TERM 801 637170 - 637182 + g 85 -6.9 -4.85782 | opp_overlap 637161 637169 637170 ATGGAACGGCATAAC CCTGC GCC GCGGG TTTGTTTTTCAGCGG TERM 802 637330 - 637320 - G 74 -3.2 -4.82901 | TCGCTGTCAGAAAAA GACG CTG CATC GAAACCCCCGAAATG purD 638756 - 637485 - | phosphoribosylamine--glycine ligase TERM 803 637528 - 637539 + g 71 -7.2 -4.19238 | overlap 637506 CAGCCGATATCGCGG CGGC AGAA GCCG TTTTCCCATTCAACC TERM 804 640725 - 640700 - g 73 -8.9 -3.90744 | opp_overlap 640696 640700 TGGCGTTGCAAAGAA GATCGTGGCCG CCTG CGGCCGTGATC TGCGTTCGCTGATGG TERM 805 640700 - 640725 + G 72 -13.3 -2.55544 | opp_overlap 640700, overlap 640696 TGGCGTTGCAAAGAA GATCGTGGCCG CCTG CGGCCGTGATC TGCGTTCGCTGATGG TERM 806 640778 - 640761 - g 74 -11.3 -3.53091 | opp_overlap 640761 AGCGCCGCGCTGAAA GCGCTTG ACCC CAAGCGC TTCATCGACGAGCAG TERM 807 640861 - 640839 - g 100 -12.6 -4.66833 | GCCGAACTGGAAAAA CCCGGTCGCG ACC CGCGCCCGAG CTTCAAGACCGCGAC TERM 808 641195 - 641174 - g 75 -7.9 -4.20868 | gap 1, overlap 641175 GCGTGAAAAGAACAA TGCG-GGCGC CAT GCGCCACGCG ACAGCCAAGCCGAAA Atu0648 638958 - 641282 + | hypothetical protein TERM 809 641313 - 641337 + F 100 -20 -4.90266 | opp_overlap 641313 TTTTTTGACCAAAAA GCCCCGCCGG ACACG CCGGCGGGGC TTTTTGCTTGATGAA TERM 810 641337 - 641313 - f 100 -20 -4.72272 | opp_overlap 641313 TTTTTTGACCAAAAA GCCCCGCCGG ACACG CCGGCGGGGC TTTTTGCTTGATGAA TERM 811 641947 - 641933 - g 95 -11.4 -4.57569 | GCAGGTTGCGAAAAA GCGGCA CAT TGCCGC CAAGCTGATGACCGA cfa 641451 - 642707 + | cyclopropane-fatty-acyl-phospholipid synthase TERM 812 642713 - 642771 + F 100 -20.5 -2.91395 | gap 2, overlap 642700 642714 642714 TTCCTTCTGACGCTG G-A-GGTATTCCCCTCCGTCCTACCGGCT CAA GGCCGGTAGGACGGAGGGGAGCGCTGTAC GTTTCTCCCCACGCT TERM 813 642714 - 642768 + F 100 -25.8 -2.70354 | overlap 642700 642713 642714 TCCTTCTGACGCTGG AGGTATTCCCCTCCGTCCTACCGGCT CAA GGCCGGTAGGACGGAGGGGAGCGCTG TACGTTTCTCCCCAC Atu0650 642860 - 643660 + | hypothetical protein TERM 814 643687 - 643712 + F 100 -13.9 -5.08824 | ATAACCACATGTGAA GCCCCGTTGCG AAGC CGCTGCGGGGC TTTTTTGCATGCGGG TERM 815 643936 - 643977 + G 71 -6.4 -4.25104 | gap 1 TGGCCGTGTTTCTGG GCCG-CAGCCCTCGCGGCC AATGC GGCAGTGGCGACTGGCGGC TTTTCCTGGGGCACG ubiA 643780 - 644733 + | prenyltransferase TERM 816 644753 - 644792 + T 88 -13.7 -3.32844 | gap 1, opp_overlap 644760, overlap 644760 CGGGAATAGGGAATA CGAAAAAGCCCGGTCGCG TCATC CGC-ACCGGGCTTTTATG TTCTGGACTGAAGAA TERM 817 644785 - 644760 - T 100 -12.6 -4.88228 | gap 1, opp_overlap 644760 644753 AGGGAATACGAAAAA GCCCGGTCGCG TCATC CGC-ACCGGGC TTTTATGTTCTGGAC TERM 818 644760 - 644785 + T 100 -12.6 -4.73682 | gap 1, opp_overlap 644760, overlap 644753 AGGGAATACGAAAAA GCCCGGTCGCG TCATC CGC-ACCGGGC TTTTATGTTCTGGAC Atu0652 645376 - 644810 - | hypothetical protein TERM 819 647849 - 647831 - g 76 -5.9 -4.63218 | opp_overlap 647831 647830 647838 GGCCGGCGAAGAAAA CGCCGGT GTGCG ACTGGCG CTCTATTTCAAGCGC Atu0653 645744 - 648182 + | hypothetical protein TERM 820 648213 - 648197 - T 90 -10.8 -4.27519 | AGCCGACAACAGAAA GGCCGG GCTAT CCGGCC TTAGGCATCTCACCA Atu0654 649173 - 648223 - | LysR family transcriptional regulator Atu8135 649376 - 649669 + | hypothetical protein TERM 821 649761 - 649792 + T 100 -12.3 -5.24129 | gap 2, overlap 649786 AATAGCCCTGCCTTT GCCCGGTGTCAGGCC CCTC GGCC-G-CGCCGGGC TTTTTTATGGCCCGG TERM 822 649786 - 649808 + T 79 -11.2 -3.64703 | overlap 649761 AGGCCCCTCGGCCGC GCCGGGCTTT TTT ATGGCCCGGC TTTACCTCACCGGCG gsh1 651215 - 649842 - | glutamate-cysteine ligase TERM 823 650697 - 650717 + g 77 -11.1 -3.59262 | opp_overlap 650696 GGTGCGGTACATCAT GTCGAGACC CTT GGTCCCGAC TTTCGGCATGTAGCG TERM 824 650994 - 651012 + g 79 -8.8 -4.2828 | GTTTTCACCGTCCAT GATCGGCT CCC AGCCGAGC TTTTCCTGCATGCCC Atu0657 652053 - 651334 - | hypothetical protein pit 653595 - 652090 - | phosphate permease Atu0659 654237 - 653758 - | MutT family NTP pyrophosphatase TERM 825 654037 - 654052 + g 80 -3.2 -5.07486 | overlap 654030 ATAGGCTTCCTGTTC GGCC ACCGCATG GGCC TTTTTGTTGGCCATC Atu0660 655241 - 654495 - | hydrolase Atu0661 656575 - 655238 - | glycosyltransferase TERM 826 655396 - 655415 + g 74 -12.2 -3.23692 | opp_overlap 655385, overlap 655367 AAAGCCGCCCGTAGA GCCGTTCA TGCT TGAACGGC TTCATCATGGTAATG TERM 827 656673 - 656684 + r 74 -7.2 -4.15565 | ATGGATTGCAGATTT CGCC GGAG GGCG TTTTCAGCTGCTGCG Atu0662 657461 - 656688 - | GntR family transcriptional regulator TERM 828 657682 - 657713 + H 91 -12.4 -4.11216 | overlap 657682 657684 AAACAATTACATCGG CTTCGATTGCGATG TTTT CATTGCAATCGATG TTTTAGAAATCCGGC TERM 829 657684 - 657711 + H 89 -13.6 -3.65542 | overlap 657682 657682 ACAATTACATCGGCT TCGATTGCGATG TTTT CATTGCAATCGA TGTTTTAGAAATCCG Atu0663 657753 - 659027 + | hypothetical protein Atu0664 660092 - 659193 - | LysR family transcriptional regulator glcD 660204 - 661637 + | glycolate oxidase subunit TERM 830 661780 - 661762 - f 85 -11.6 -4.05033 | TCGACCGCAGAGAAA CGCGCGGC GTC GCCGCGAG TCGATCTCCCCACCT TERM 831 661957 - 661937 - g 76 -5.3 -4.62336 | overlap 661939 ACGCGACCCGAAAAA CCCCGCTGA AAA TCATCGGCG GCAACACCCGCTCCG TERM 832 662458 - 662426 - g 77 -3.5 -5.00616 | opp_overlap 662414, overlap 662411 CGCCGGCGGAAAAAA CCGTCGTCGT-ATCC GGGCT GGATGACGAGG-CGG CGACACGCATCATGG TERM 833 662637 - 662663 + G 71 -9.4 -3.72576 | GGCCAAACTTCTGTC GGTCATGGATCG GGT CGGTCCATGGAC TTTGCTGGAGGGCGA glcE 661873 - 663075 + | glycolate oxidase subunit TERM 834 663980 - 663964 - g 73 -5 -4.59773 | overlap 663966 GCCTATGCCGAAAAA GCCGCG CGTGT CTCGGC GCTTGCGAAGGACAT glcF 663091 - 664392 + | glycolate oxidase iron-sulfur subunit Atu0668 665048 - 664389 - | hypothetical protein TERM 835 665124 - 665145 + r 72 -11.5 -3.03159 | opp_overlap 665124 GACAGAAACGAAAAA CGGGCGGTC AGCT GACCACCCG TCTTAAGGCCGTTCC TERM 836 665145 - 665124 - R 100 -13.7 -5.07011 | opp_overlap 665124 GACAGAAACGAAAAA CGGGCGGTC AGCT GACCACCCG TCTTAAGGCCGTTCC Atu0669 666084 - 665308 - | hypothetical protein tag 666323 - 666952 + | 3-methyladenine-DNA glycosylase Atu8085 666949 - 667392 + | hypothetical protein Atu0671 668335 - 667418 - | hypothetical protein TERM 837 669317 - 669348 + G 71 -5.7 -4.43213 | overlap 669318 CGGCAGGGCCTGCTG GTCCGCGCCGGCA TCGATC TGCCGGCACGCAA TTTTGCTCTGTTGCG Atu0672 668543 - 669460 + | LysR family transcriptional regulator Atu0673 670250 - 669486 - | hypothetical protein TERM 838 670070 - 670080 + g 78 -6.8 -4.59853 | CGACAGCCGTCCGTC GCTG CTT CAGC TTTTTCGCCGATTGC Atu0674 670526 - 670257 - | hypothetical protein TERM 839 670445 - 670470 + g 70 -3.1 -4.65933 | opp_overlap 670444 670445, overlap 670447 670455 TTTCATGGAGAAAAC TGCGGATGCGC CGGC GCACTTCCGGA TTTATTTTGCGCATC Atu0675 670737 - 670510 - | hypothetical protein TERM 840 670779 - 670762 - H 71 -6.3 -4.25104 | CCTTTCCGACTAAAA TGGGATA CATG CATCCCA TATAGCATGGCTTGC TERM 841 670841 - 670818 - H 74 -6.6 -4.23781 | opp_overlap 670818, overlap 670813 670819 GCCAGTAAAACCAAA GCCTTTGCGG CTTG CCGCACAGGG CTTCATCCTCTAATA TERM 842 670931 - 670914 - g 88 -2.7 -5.54079 | gap 1, opp_overlap 670930, overlap 670915 670916 670930 CGAAAAAGCAAAAAA GCC-TCAG AAA CTGAAAGC CCGCCTGCCGCGCGG hisS-1 670894 - 672417 + | histidyl-tRNA synthetase Atu0677 672422 - 672790 + | hypothetical protein hisS-2 672807 - 673934 + | ATP phosphoribosyltransferase regulatory subunit hisG 673931 - 674623 + | ATP phosphoribosyltransferase catalytic subunit TERM 843 674642 - 674663 + T 100 -17.3 -5.24129 | opp_overlap 674642 CACAAAAGAAAAAAA GCCGCCGGA TCGC TCCGGCGGC TTTTTTGTCGGACAG TERM 844 674663 - 674642 - T 100 -17.3 -6.14618 | opp_overlap 674642 CACAAAAGAAAAAAA GCCGCCGGA TCGC TCCGGCGGC TTTTTTGTCGGACAG TERM 845 674723 - 674709 - T 70 -7 -4.16842 | GCGAGCGGCAACAAA GCCGCG CTT CGCGTC GACCGAGTAGGCACC Atu0680 675179 - 674688 - | hypothetical protein Atu0681 675724 - 675290 - | hypothetical protein Atu8056 676265 - 675933 - | hypothetical protein TERM 846 676182 - 676163 - G 74 -5.6 -4.5442 | opp_overlap 676163, overlap 676165 GCGGCAACGAGAAAA GGGCGATC CGAA GACCGCTC TTTCGTATTCCAGAG TERM 847 676302 - 676283 - R 100 -13.6 -5.26875 | opp_overlap 676283 GCGGCAATGAAAAAA GGGCGATC CGAA GATCGCCC TTTCGTATTCCGGTG TERM 848 676283 - 676302 + r 100 -13.6 -3.93038 | opp_overlap 676283 GCGGCAATGAAAAAA GGGCGATC CGAA GATCGCCC TTTCGTATTCCGGTG groEL 677962 - 676328 - | chaperonin GroEL groES 678334 - 678038 - | co-chaperonin GroES TERM 849 678663 - 678678 + H 74 -2.6 -5.00616 | gap 1, overlap 678665 GGCGTCCCGCTTTGC GA-TGTG ACG CACACTC TTTTTTCGCACCCGG Atu0684 678704 - 679552 + | hypothetical protein TERM 850 680071 - 680051 - g 74 -11.1 -3.55563 | ATGGCAGCCGGCAAA CGTCACGGC TTC GACGTGACG CTGGTGGATGCCTTC ribF 679610 - 680590 + | bifunctional riboflavin kinase/FMN adenylyltransferase TERM 851 680607 - 680621 + F 70 -2.7 -4.77629 | overlap 680602 CGTGTTCGTCCGGCT GCGCC TTGCC GTCGC TTTTCTCTTCCTTTT TERM 852 680714 - 680756 + F 80 -9.1 -4.1466 | opp_overlap 680741, overlap 680715 TTGGCCGAATTATTG GCCCGG-CCTTCCGCCCGCTC TGA GAGAGC-CGGAAGGTCCGGGA TTTTGGCGCTTACAT TERM 853 680715 - 680755 + F 81 -12.6 -3.08314 | opp_overlap 680741, overlap 680714 TGGCCGAATTATTGG CCCGG-CCTTCCGCCCGCTC TGA GAGAGC-CGGAAGGTCCGGG ATTTTGGCGCTTACA TERM 854 683413 - 683399 - g 83 -4.2 -5.055 | overlap 683401 CCAAGTGGGAAAAAA TCCGGA AGG TCCGCA CCGTCGTGACGGGCG ileS 680863 - 683766 + | isoleucyl-tRNA synthetase Atu0687 683918 - 684547 + | hypothetical protein codA 685060 - 684602 - | cytidine and deoxycytidylate deaminase TERM 855 685262 - 685230 - g 80 -10.6 -4.13014 | gap 1, opp_overlap 685233 685234 685256, overlap 685234 685248 TGCAGAGCGTGAAAA GAAACCGGCGCAAGC CAAG GCT-GCGCCCGCTTC TGCCGCCACGGCCGA TERM 856 685258 - 685234 - g 81 -7.8 -4.65933 | gap 1, opp_overlap 685234 685233 685256, overlap 685230 685248 GAGCGTGAAAAGAAA CCGGCGCAAGC CAAG GCT-GCGCCCG CTTCTGCCGCCACGG TERM 857 685256 - 685282 + G 82 -14.4 -3.14132 | opp_overlap 685234 685230 685248, overlap 685234 685233 AAGCCAAGGCTGCGC CCGCTTCTGCCG CCA CGGCCGAAGTGG TTGGTGCCGGCAAGC rluB 685132 - 687141 + | ribosomal large subunit pseudouridine synthase B Atu0690 687122 - 687679 + | hypothetical protein TERM 858 688551 - 688577 + G 83 -4.2 -5.0538 | overlap 688552 CATTTTCCTGCGCCC ACCGGTGCACCG TTT CGGCGTGCTGGA TTTTTTGAAGTCGGA Atu0691 687766 - 688692 + | hypothetical protein TERM 859 688719 - 688729 + T 74 -8.2 -3.92542 | TGAATAGGAAGCCGA GCGG GGG CCGC TTATTTGACACTACA kefB 690572 - 688740 - | glutathione-regulated potassium-efflux system protein TERM 860 689931 - 689900 - G 81 -5 -4.93296 | opp_overlap 689920 CGATGACGACAAAAA GGGCGGCCGCGA TCATCACT TCGCGCGCACCC GTGCGGGCGATGATC Atu0693 690689 - 692035 + | PmbA/TldD related protein TERM 861 692114 - 692091 - f 84 -5.8 -5.0916 | overlap 692092 692093 GTGCGAAGAGAAAAA CGGGCGCGCC GTTT GAGGCGCGCG GAAAAGACGGCAAAA Atu0694 692129 - 692935 + | inositol monophosphatase family protein TERM 862 693170 - 693187 + G 74 -5.6 -4.48072 | GCAGATGACGGTTGA TAACGC CCATAT GCGTTA TTTTATCGTGCATAT Atu8086 692997 - 693236 + | hypothetical protein kdtA 693451 - 694773 + | 3-deoxy-D-manno-octulosonic-acid transferase Atu0696 694767 - 695504 + | phosphatase TERM 863 695749 - 695773 + G 74 -3.5 -4.8384 | overlap 695751 GGTGGCAGAAAGCAG GTTGGCAGG CATGGCT CCTGTCACC TTTTTCGCTTCTTTA TERM 864 696407 - 696434 + G 86 -13.6 -3.48593 | gap 1, opp_overlap 696395 AAAGCGCGTGCTGGC TTTCGCCGGTATC GCC GAT-CCGGCGAAA TTCTATCGCACCGTC lpxK 695709 - 696755 + | tetraacyldisaccharide 4'-kinase Atu0698 696985 - 696752 - | hypothetical protein mutL 698958 - 697138 - | DNA mismatch repair protein TERM 865 700682 - 700717 + G 78 -4.4 -4.83169 | GGCTGGGACTTTCCT GGCGGCTCGCCACCTC CGGC GAGGAGGCCTTGCGCC TTTTTGTCGAACAGT Atu0700 699319 - 700986 + | two component sensor kinase Atu0701 701073 - 702425 + | GGDEF family protein TERM 866 702661 - 702673 + T 73 -10.5 -3.38812 | opp_overlap 702660 702661, overlap 702659 GCCCTTACCTGAAAG GCGCC CCA GGCGC TGTTATTGCGGCAGG Atu0702 703589 - 702702 - | calcium-binding protein, regucalcin kdgA 704223 - 703594 - | 2-dehydro-3-deoxy-6-phosphogalactonate aldolase TERM 867 703898 - 703914 + g 76 -6.5 -4.56597 | GGGGTGAGAACACCC GGCATCG TTA CCATGCC TTTTTCACGCGCGGC dgoK 705153 - 704239 - | 2-dehydro-3-deoxygalactonate kinase fabG 705926 - 705153 - | 3-oxoacyl-(acyl carrier protein) reductase TERM 868 706124 - 706100 - g 74 -6.3 -4.50976 | CCTCACACCAGAAAA CCGAAAACGCC ACC GGCACGCTCGG CAAGGTCGTCTCGCT TERM 869 706695 - 706730 + G 87 -10.3 -4.37092 | opp_overlap 706695 TGAAATCGGAATTCA TTGCGTCGCCGCACC GGTCCG GGCGCGGGGCCGCAA TTTTGTGGCGGCGAT kdgR 706036 - 706875 + | IclR family transcriptional regulator TERM 870 707536 - 707563 + G 74 -4 -4.74917 | opp_overlap 707532 707549 TCAGGCAATAAGGCG GTTCTGCCAACC ACCC GGCTTGCCGAAC TTTTGTATATTTCCT TERM 871 707787 - 707764 - g 78 -3 -5.14563 | overlap 707765 CGCGCGACCAAAAAA CTCGACACGG TCAA CCGCACCCAG GCTGTCGCGAAAGCG Atu0707 707221 - 707826 + | LuxR family transcriptional regulator nrt 707905 - 709128 + | ABC transporter, nucleotide binding/ATPase protein TERM 872 709587 - 709555 - g 74 -12.5 -3.14132 | GTCCCGCCGCAGCAA CCGGCCGGCCCGCCG CCG CGCCCGGTCGGCCGA CACCGCAGCCGGGCT Atu0709 709245 - 710411 + | mrp protein corA 710699 - 711727 + | magnesium/cobalt transport protein TERM 873 713201 - 713190 - g 85 -7.2 -4.85782 | CGGTGGAAAAAGAAA GCGC CCAT GCGC CGGTGCGTGTGCCCG TERM 874 713473 - 713497 + G 71 -7.1 -4.18018 | opp_overlap 713476, overlap 713476 GAGACGCACCGGCTA CAAGTTCGACA TCA TGTCGACCTCG TTTTACCTCGGCCGC Atu0711 711743 - 713662 + | potassium uptake protein TERM 875 713672 - 713686 + F 85 -12.8 -3.57825 | overlap 713668 GTCTGATGGAGCCAT CCGGCG GCG CGCCGG TTCCTGTTTTCTCCG TERM 876 714706 - 714694 - g 89 -10.5 -4.59773 | opp_overlap 714693 714692 CGCCATTCTCAAAAA GCCGG AGG CCGGC CGTTTCGTGCCGCAG TERM 877 715130 - 715153 + G 70 -4.5 -4.48072 | gap 1, opp_overlap 715130, overlap 715132 AAATCCATGAAGAAG GTCG-GCAGG ATCGG CCTGCACGTC TTTTATCGTACCTAT Atu0712 714005 - 715186 + | hypothetical protein TERM 878 715337 - 715310 - f 71 -7.7 -3.96216 | TTTGTATCGAAACAA GCTGCGCCAGT GCCTTG ACTAGCGAAGC CCCTAAAACTATGTT atpI 715457 - 715822 + | ATP synthase, subunit I atpA 715883 - 716632 + | F0F1 ATP synthase subunit A atpC 716706 - 716933 + | F0F1 ATP synthase subunit C TERM 879 716953 - 716979 + F 79 -13.7 -2.7728 | overlap 716944 GGCATCAGGTCTGGA TCACGGCCCGC AAATG GCGTGCCGTGA TCCTTCGCATTTGCA TERM 880 717428 - 717370 - g 79 -8 -4.4831 | overlap 717346 717371 717372 717395 ACCTATGAAAAAGAA CTCGCGGCAGCCCGCGCCAAGGCA AGCTCGATCGG CGCCTCGGCACGTGACGCCGCCAA GGCGAAGGCCGATGC atpB 717013 - 717654 + | F0F1 ATP synthase subunit B' TERM 881 718030 - 717998 - g 82 -12.6 -3.64259 | overlap 717988 717985 718001 AAGCAGGCCGAAGAA GACGCCATCGGCGC CGTCC GCGCCGCCGCCGTC GACATTGCCATCGCC atpF 717656 - 718141 + | F0F1 ATP synthase subunit B TERM 882 718203 - 718181 - f 74 -9.9 -3.66178 | gap 1, opp_overlap 718181 TCTTGTAATCTGAAA CCCCTC-CAG TCCG CTGTGAGGGG TTTTTTCTTTCTGCC TERM 883 718181 - 718203 + F 100 -9.9 -5.72622 | gap 1, opp_overlap 718181 TCTTGTAATCTGAAA CCCCTC-CAG TCCG CTGTGAGGGG TTTTTTCTTTCTGCC Atu0718 718423 - 718884 + | hypothetical protein Atu0719 719044 - 719679 + | transacetylase rnhB 720397 - 719744 - | ribonuclease HII TERM 884 720293 - 720305 + g 74 -6.2 -4.47888 | overlap 720254 ATCCGTGCCGGCCAC GGGC CAGAA GCCC TTCTTTTTGGCTTCC TERM 885 720478 - 720499 + r 72 -11.5 -3.10715 | opp_overlap 720457 GTGAGCCGGGGTCGA GGGGCGTGG CTCA CCGTGCCCC TTAGGTCGTCATGAC Atu0721 721838 - 720729 - | hypothetical protein TERM 886 721732 - 721718 - G 71 -7.8 -4.09864 | AGCCATCGTCGAAAA CCTCGC GCT GCAAGG CCTCGAAGCGCCCGT Atu0722 722175 - 722693 + | hypothetical protein Atu0723 724141 - 722705 - | FAD dependent oxidoreductase TERM 887 724060 - 724070 + g 85 -2.4 -5.40072 | CCATTTCCGCCAGGT CGCG CAC CGCA TTTTTTTCGCCAACG TERM 888 724143 - 724159 + r 74 -7.9 -4.09685 | overlap 724118 GTCATGGGCGTCATG GGCGGCG TCT CGCTGTC TTTTGAAACATGGGC Atu0724 725169 - 724192 - | hypothetical protein TERM 889 724499 - 724518 + g 78 -2.1 -5.12617 | overlap 724493 724492 GCCAGCATTCCCGGC GCCTC GATGGCGGCG GAGGC TTTTTTCGGTCGTTC Atu0725 725844 - 725233 - | hypothetical protein TERM 890 727280 - 727270 - g 71 -6.8 -4.2558 | opp_overlap 727270 CATCGTCGAGGAAAA TGCC TTC GGCA TTCGCTCGCCGGCCT Atu0726 726173 - 727417 + | ring hydroxylating dioxygenase, alpha-subunit Atu0727 727575 - 728507 + | ferredoxin I TERM 891 728503 - 728524 + F 83 -12.3 -3.72152 | overlap 728496 ACATCAAGGTGGAGG CGTGACGTC CAAC GGCGTCACG TTCTAATTTTCCTTC Atu0728 728682 - 729143 + | hypothetical protein TERM 892 729153 - 729182 + F 100 -17.3 -4.11216 | opp_overlap 729158, overlap 729154 729158 CGCTAACAGTAATTT TGAAAGCCCGGAT TTCG ATCCGGGCTTTCG TTTTCCAGCTGCCGG TERM 893 729154 - 729181 + F 100 -18.6 -3.06515 | opp_overlap 729158, overlap 729153 729158 GCTAACAGTAATTTT GAAAGCCCGGAT TTCG ATCCGGGCTTTC GTTTTCCAGCTGCCG TERM 894 729158 - 729177 + F 100 -13.6 -4.20136 | opp_overlap 729158, overlap 729154 729153 ACAGTAATTTTGAAA GCCCGGAT TTCG ATCCGGGC TTTCGTTTTCCAGCT TERM 895 729177 - 729158 - f 89 -13.6 -3.62032 | opp_overlap 729158 729154 729153 ACAGTAATTTTGAAA GCCCGGAT TTCG ATCCGGGC TTTCGTTTTCCAGCT Atu0730 729366 - 729890 + | hypothetical protein TERM 896 729941 - 729918 - T 95 -18.2 -2.93382 | opp_overlap 729918 GCTGAGATCGACAGA GCCGTCCGGT CACC ACCGGACGGC TTTTTGCTGTCACAA TERM 897 729918 - 729941 + T 100 -18.2 -4.8048 | opp_overlap 729918 GCTGAGATCGACAGA GCCGTCCGGT CACC ACCGGACGGC TTTTTGCTGTCACAA Atu0731 730946 - 729951 - | divalent cation transporter TERM 898 730357 - 730395 + g 79 -8.8 -4.24948 | gap 1, opp_overlap 730357, overlap 730358 730392 TGCAGGCGCACGACA GTGCGGCGTAGCGGTGC AAGGCG GCGCCGCT-CGTCGCGG TTTTCGCTGTCATAA TERM 899 730358 - 730394 + g 74 -12.3 -3.14487 | gap 1, opp_overlap 730357, overlap 730357 730392 GCAGGCGCACGACAG TGCGGCGTAGCGGTGC AAGGCG GCGCCGCT-CGTCGCG GTTTTCGCTGTCATA TERM 900 732068 - 732052 - g 71 -9.3 -3.75738 | CACCATGATGAACAA CGCCCGC CTT GCGGTCG GCATGCAGGGCGTGG TERM 901 732518 - 732558 + G 80 -11.2 -3.76402 | GCCATCGATCTGGTG CTGCGCAAGCTGC-CGCTCT CCG AGGGCGCGCAGGT-GCGCGG TTTCATCGCTGAGCT TERM 902 732921 - 732899 - g 72 -13.4 -2.62396 | opp_overlap 732897 GATCGCGTTATATCA GGGGCGGCAA GCC TTGCCGCCGC CCGCACCCTGTTGGC mmgC 731156 - 732940 + | acyl-CoA dehydrogenase TERM 903 733053 - 733037 - g 89 -5.1 -5.18726 | opp_overlap 733037, overlap 733038 GCCGGAGAAGAAAAA TGCCATC ACC GATGCCA TGTATCTGCGCATGG TERM 904 733091 - 733118 + G 73 -9.2 -3.85698 | gap 1, opp_overlap 733099 CCTGCATGCCGCCAA TGCGAACA-CCGA AAT TCGGGTGGTCGCA TTTCTCGGCACGGAA Atu0733 732951 - 733709 + | enoyl-CoA hydratase Atu0734 733758 - 734114 + | hypothetical protein Atu0735 735573 - 734323 - | RNA methyltransferase Atu0736 736322 - 735570 - | hemolysin TERM 905 736257 - 736235 - G 74 -11.3 -3.53012 | gap 1 CGGTGCCGCGCGAAA CCGCGTCGCG CGCA CGCGA-GCGG CTGGCAAAGTGGCCA TERM 906 737497 - 737461 - g 100 -13 -4.75219 | gap 1, opp_overlap 737485 737487, overlap 737456 CAACGAGGAAGAAAA GGCGCGCGACGAAGCCG CCAG CGCCTTCGCCA-GCGCC GAGCTTGGCAAGGGC TERM 907 737487 - 737535 + G 86 -13.7 -3.50588 | opp_overlap 737456 737461, overlap 737485 AAGCCGCCAGCGCCT TCGCCAGCGCCGAGCTTGGCAAG GGC CTTGCCGCTCTCGCCGACGGCGA TCTTTCCTATCGCAT TERM 908 737988 - 738012 + G 84 -9.1 -4.46656 | overlap 738004 CCGGTGTGGAAGCGG CCCGCGCCGGT GAT GCCGGCAAGGG TTTTGCTGTTGTCGC mcpG 736601 - 738622 + | chemotaxis methyl-accepting protein TERM 909 738651 - 738668 + T 100 -14.1 -4.68593 | opp_overlap 738651 TTGAATAACGGAAAA CGGGGCC GCAG GGCCCCG TTTTTGCATCATCAC TERM 910 738668 - 738651 - T 100 -14.1 -4.36127 | opp_overlap 738651 TTGAATAACGGAAAA CGGGGCC GCAG GGCCCCG TTTTTGCATCATCAC Atu0739 739654 - 738692 - | hypothetical protein TERM 911 738754 - 738728 - G 75 -3 -5.0133 | gap 1 CATCCGGGCAAAAAA CTGCT-CATCG GACAGT CGGTGCAGCAG GGCGGCAATGACGGC Atu0740 739774 - 740226 + | AsnC family transcriptional regulator TERM 912 740238 - 740210 - f 73 -5.2 -4.56978 | gap 1, opp_overlap 740211 740227 CGGCGAAAGAAGAAA CGGCGA-TCCGGC TTTA ACCGGAACCGTCG CGGTTTTTCAGAAAG Atu0741 740265 - 740648 + | hypothetical protein Atu0742 740691 - 741062 + | hypothetical protein Atu8012 741337 - 741116 - | hypothetical protein Atu0743 742224 - 741430 - | hypothetical protein Atu0744 742332 - 742694 + | hypothetical protein TERM 913 742719 - 742699 - T 100 -16.9 -3.87815 | opp_overlap 742688 742686 742701 CTGTATCCTGAGAAA GAGGCGGGA TAG TCCCGCCTC CTGTCCCGGCAATCT TERM 914 742701 - 742717 + T 78 -13.7 -2.62263 | opp_overlap 742699, overlap 742688 742686 GTATCCTGAGAAAGA GGCGGGA TAG TCCCGCC TCCTGTCCCGGCAAT dxs 744656 - 742737 - | 1-deoxy-D-xylulose-5-phosphate synthase TERM 915 744080 - 744039 - G 88 -13.7 -3.63968 | gap 1, overlap 744048 744078 GCCGAAATCGCGAAA GCCCATATAGGTGCGGCCGG AGG CCAGCCGCGCC-AGATAGGC GCTCATCGCACCCGT TERM 916 744072 - 744048 - G 79 -14.9 -2.9348 | overlap 744039 GCGAAAGCCCATATA GGTGCGGCCGG AGG CCAGCCGCGCC AGATAGGCGCTCATC Atu0746 745669 - 744746 - | hypothetical protein xseB 746184 - 745930 - | exodeoxyribonuclease VII small subunit Atu0748 747122 - 746187 - | deacetylase TERM 917 746432 - 746419 - G 70 -3.7 -4.62336 | opp_overlap 746426, overlap 746420 AGGTCAGGCGAAAAA TCGGC GATT GCCGG CAGAACCCGCGATTT bioY 747711 - 747148 - | biotin synthesis BioY protein Atu0750 748349 - 747717 - | ABC transporter, membrane spanning protein Atu0751 749026 - 748346 - | ABC transporter, nucleotide binding/ATPase protein (cobalt) TERM 918 749791 - 749825 + G 81 -8.6 -4.7173 | gap 1, overlap 749777 749776 749789 749810 GTCAGGCGCTGAAGC GGCTG-GGTTTCGCC ACTCAC GGCGAAATCGCCGCC TTTTTCGATCTCGTC Atu0752 749139 - 750335 + | hypothetical protein ribA 751616 - 750516 - | 3,4-dihydroxy-2-butanone-4-phoshate synthase/GTP cyclohydrolase II TERM 919 751459 - 751477 + g 89 -7.4 -5.02074 | ACGATGCCGGATGTA TGGCGC ACGATCA GCGCCA TTTTTTCCGGCGTGC aroC 752726 - 751629 - | chorismate synthase Atu0755 753122 - 753424 + | hypothetical protein TERM 920 753516 - 753483 - T 81 -14.1 -2.66008 | gap 1, overlap 753472 AAACGAGCGATATCA TCCGTTTCTTCTCCCC GCC GGGGAGAAGAAA-GAA GCGGCGGCGTTCAGC gpmB 754178 - 753588 - | phosphoglycerate mutase TERM 921 754077 - 754046 - G 71 -6.5 -4.18018 | opp_overlap 754067 CCCGTTCACCCAAAA GGCGGGCGAGAAT CCTGCC ATTGCCGACCGCC TGCTGGCGGCCGAAA fabI 755027 - 754209 - | enoyl-(acyl carrier protein) reductase dnaJ 756274 - 755159 - | DnaJ family molecular chaperone TERM 922 755264 - 755284 + g 74 -11.1 -3.53091 | opp_overlap 755253 CAGATCGCCCGAACC GCCCTTGCC ATC GGCAAGGCC TTTGCCGGCAAGCCT TERM 923 756075 - 756095 + g 70 -3.2 -4.6856 | TCAGCCGCCTGTCGG GCCTGATC GTAGA GATCGCGC TTTTTCGAATCTTTC TERM 924 756441 - 756455 + r 74 -4.2 -4.70169 | TACGGAAGGAGTGTG CCGG GGCAGGG CCGG TTTTATTCCATATGG Atu0759 756933 - 756484 - | hypothetical protein TERM 925 757123 - 757087 - g 70 -10.2 -3.53444 | gap 1 CGACGGCTTCTGAAA TCAACGATC-CGAACGC GGTG GCGCTCGCGACCGTGGA CGAAAATGGCCTGCC pdxH 756990 - 757610 + | pyridoxamine 5'-phosphate oxidase TERM 926 757621 - 757641 + T 95 -14 -3.34398 | overlap 757619 CCTGAACGCCATCAG GGCAGGCC ATCGC GGCCTGCC TATTTCAGCAGCGAA Atu0761 758360 - 757641 - | hypothetical protein TERM 927 757913 - 757900 - G 71 -5.9 -4.36914 | opp_overlap 757887 TTGGCGCGCACAAAA GCGCC TTTC AGCGC ACCACCCAGCCAATA TERM 928 757967 - 757937 - G 76 -12.5 -3.3676 | gap 1, overlap 757927 757938 GCCAATAGGCGACAA CCGGCGGGCCGCCC AGCT GCGCGGCCC-CCGA AAACAGCCCGGCCAG TERM 929 757966 - 757938 - G 72 -13.8 -2.61735 | gap 1, overlap 757927 757937 CCAATAGGCGACAAC CGGCGGGCCGCCC AGCT GCGCGGCCC-CCG AAAACAGCCCGGCCA TERM 930 758338 - 758320 - G 78 -4.4 -4.7416 | overlap 758321 758322 CCAAAACCGGAAAAA CCGCGGGC AAG GCCGGCAA GGCACGCGGCCCCGG TERM 931 758639 - 758619 - g 70 -4.7 -4.57073 | overlap 758633 GAGGCCTCGCAAAAA TATGCCGCT GAA AACGGAATA TTCCGCGACCCGGAC Atu0762 758574 - 758882 + | hypothetical protein Atu0763 759545 - 758871 - | hydrolase Atu0764 759989 - 759552 - | hypothetical protein tldD 761597 - 760182 - | hypothetical protein ialB 762203 - 761679 - | invasion associated locus B TERM 932 762651 - 762681 + G 72 -13.3 -2.52896 | gap 1 ATGACCTGTCTGCTC ACGGCTG-TCGGCG CCCA CGCCGATCAGCCGG TGCATTGGCAAATGG coxB 762636 - 763499 + | cytochrome c oxidase subunit II TERM 933 763886 - 763902 + G 71 -7.9 -4.09864 | TTCTTCATGGTCATG CCGGCGA TGA TCGGCGG TTTTGCCAACTGGAT coxA 763517 - 765226 + | cytochrome-c oxidase chain I TERM 934 765312 - 765279 - f 75 -5.8 -4.56597 | opp_overlap 765285 765306 CCGGCTGCTGAAAAA GAGGGACGGCGCGG TTGGGT CCGTGCCGTTTCCC GAACGGGCAGCTTCT TERM 935 765285 - 765306 + F 74 -10.8 -3.53012 | opp_overlap 765279 GCTGAAAAAGAGGGA CGGCGCGG TTGGGT CCGTGCCG TTTCCCGAACGGGCA TERM 936 765468 - 765420 - f 74 -6.5 -4.25104 | opp_overlap 765431 765456, overlap 765404 TGGCCTTTATGAAAA GCAAGCGCAGACGAATGGCGGCA GGG CGCGGCGATTGGCCGGCACATGC TGGCATCGGTTTGGT TERM 937 766323 - 766338 + G 76 -6 -4.59109 | overlap 766308 GGTGCTGACCGCGGC GGCCGC CGTT GCGCCC TTTTTCACGGGTCTG ctaB 765616 - 766569 + | protoheme IX farnesyltransferase Atu8013 766569 - 766700 + | hypothetical protein coxG 766729 - 767346 + | cytochrome C oxidase assembly protein TERM 938 767710 - 767728 + G 76 -9.6 -4.07877 | CGGCATGATCATGTT CATCGCCT CCG AGGTGATG TTCTTTGTCGCCTGG coxC 767408 - 768283 + | cytochrome c oxidase subunit III TERM 939 768712 - 768722 + G 81 -4.6 -4.93296 | overlap 768704 TGCCGATGCGGGGGA TGGC CCG GCCG TTTTTGTCATGCTGA Atu0772 768545 - 768931 + | hypothetical protein surf1 768942 - 769676 + | surfeit 1 TERM 940 769773 - 769791 + G 80 -10.2 -4.07885 | opp_overlap 769772 769773 CCCTTTGACGATAAG GCTGTGCG GAC CGCGCGGC TTTTGCGCGGGCGTG lytB 769735 - 770781 + | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase TERM 941 770792 - 770764 - f 70 -6.7 -4.07568 | gap 1 GCGCTGCCGCCAAAA GCCACCGCCGGT ATCTGA AGCGG-GGTGGC GCTGAGCAAGGGCGG thrB 770874 - 771842 + | homoserine kinase Atu0776 771839 - 772279 + | ribonuclease H Atu0777 772456 - 772764 + | hypothetical protein Atu0778 775319 - 772779 - | hypothetical protein TERM 942 773539 - 773515 - G 71 -5.5 -4.4261 | opp_overlap 773516 773519, overlap 773516 773517 TCGGCAATACCAAAA GCGCCAGCCGC ATC GCGGCCGTCAT TGTGACCAACATCGC TERM 943 775581 - 775622 + r 74 -10.2 -3.53018 | gap 1, opp_overlap 775605, overlap 775579 775585 775589 CTGAAGTGCTCGTGA TTCGTCAAGGCCCGCGAAC GATAA GTCCGCGGGCCT-GATTAA TATTTGATGTATCAA TERM 944 775585 - 775618 + r 89 -13.2 -3.4934 | gap 1, opp_overlap 775605, overlap 775581 775579 775589 AGTGCTCGTGATTCG TCAAGGCCCGCGAAC GATAA GTCCGCGGGCCT-GA TTAATATTTGATGTA TERM 945 775589 - 775615 + r 86 -15.1 -2.87822 | opp_overlap 775605, overlap 775585 775581 775579 CTCGTGATTCGTCAA GGCCCGCGAAC GATAA GTCCGCGGGCC TGATTAATATTTGAT Atu0779 776147 - 775662 - | peroxiredoxin TERM 946 775928 - 775968 + g 71 -8.1 -4.11216 | opp_overlap 775928, overlap 775929 CATTGACGGAGACGA CCGCGATATCATCCACGCC CTT GGCGAGAATGGCGTCGCGA TTTTCGAGATAGCCC Atu0780 777096 - 776248 - | hypothetical protein TERM 947 776702 - 776718 + g 77 -11.5 -3.59979 | TCGATCGTCCCGCTT GCCGCCG GAT CGGTGGC TTTCAACTGAAAGGG TERM 948 777521 - 777547 + G 76 -10 -3.80461 | overlap 777509 ATTTCCGATCCAGTG CGGCGGCCCGGT CGA ATCCGGCCGCGG TTTCGTGCTGCATTC Atu0781 777258 - 777863 + | hypothetical protein Atu0782 777970 - 778161 + | hypothetical protein TERM 949 778204 - 778231 + F 100 -16.4 -3.4252 | opp_overlap 778177, overlap 778197 778177 778198 ACAACAGGGCGCGTG GAGCGCATGTGT TATG GCACATGCGCTC TTGTCGTGCGTGGGC TERM 950 778533 - 778557 + G 80 -10.6 -4.08394 | TATCTGCAACTGGTC GGTGCCGGCG GAAAG CGCCAGCGCC TTTTGCCCGGCCTGT Atu0783 778210 - 779415 + | hypothetical protein TERM 951 779547 - 779527 - T 76 -12.6 -2.78816 | GGATGCGTGATTAGA TCCTCGGG ACGAG CCCGAGGA TGACGTCGTACTCGT Atu0784 782509 - 779594 - | hypothetical protein TERM 952 781750 - 781694 - G 81 -13.8 -3.37513 | gap 2, opp_overlap 781703 781705, overlap 781696 781699 ATAGGTGAAGAGGAA GACC-ACGAAGCTGG-AGGCGAGCGCCA CTT CGGCGCCCGCCCGCCATATTCGTTGATC GCTTGAGGTGACGGT TERM 953 781747 - 781696 - G 82 -14.4 -3.25341 | gap 1, opp_overlap 781703 781705, overlap 781694 781699 AGGTGAAGAGGAAGA CCACGAAGCTGG-AGGCGAGCGCCA CTT CGGCGCCCGCCCGCCATATTCGTTG ATCGCTTGAGGTGAC TERM 954 781744 - 781699 - G 77 -14.7 -2.80779 | gap 1, opp_overlap 781703 781705, overlap 781696 781694 TGAAGAGGAAGACCA CGAAGCTGG-AGGCGAGCGCCA CTT CGGCGCCCGCCCGCCATATTCG TTGATCGCTTGAGGT TERM 955 782454 - 782444 - G 83 -4.6 -5.07971 | overlap 782446 GAAAAGAAGGAAAAA CGGC ACA GCCA GTGCGATTGCCGCCA rimJ 783105 - 782506 - | ribosomal-protein (S5)-alanine N-acetyltransferase Atu0786 784497 - 783199 - | M16 family peptidase TERM 956 783678 - 783652 - G 70 -10 -3.47475 | opp_overlap 783658, overlap 783650 783654 ATAAACGGAATAACA CAGGCCGCGCGC CTC GCGCACTTCCTG GAAGAGACGCGATGA thrC 786090 - 784519 - | threonine synthase TERM 957 784707 - 784719 + g 78 -4.7 -4.8269 | opp_overlap 784704, overlap 784708 TCGACAGAACCACCA TCGGG CTT CCCGC TTTTTCGTGCTTCTC Atu0788 786159 - 786731 + | hypothetical protein TERM 958 786738 - 786750 + T 70 -3.3 -4.72386 | CGCCGGTGATTTGGC GAGCC GGA GCCTC TTTTTGCATGCTTTG TERM 959 786806 - 786826 + T 79 -12.6 -2.92192 | CCATCCGCGACGTCA TCCTCGGC CCTGT GCCGAGGA TCTAATTACGTCGAA Atu0789 787129 - 786944 - | hypothetical protein Atu0790 787829 - 787140 - | hypothetical protein Atu0791 788044 - 788724 + | GntR family transcriptional regulator Atu0792 788770 - 789234 + | hypothetical protein Atu8136 790518 - 789418 - | hypothetical protein TERM 960 790061 - 790085 + g 75 -7.9 -4.15854 | opp_overlap 790067, overlap 790062 CCATAGACGCTGTCC TTGAAATCGCC CTT GGTGATTTCGG TTTTCGCCTGGGTTT TERM 961 790582 - 790595 + H 78 -6.7 -4.58283 | opp_overlap 790574 CGGAACAGGAGAACC CGTTG TGCA CAACG TTTTTGCCGCACTTC TERM 962 790770 - 790795 + G 71 -5.3 -4.30576 | gap 1, opp_overlap 790757, overlap 790770 ATGGCAGCAGTTTTT CC-GCTGGCCGA TTT TCGGCGTGCCGG TTTTGATCGTGCGGG ccrM 790755 - 791900 + | cell cycle regulated site-specific DNA-methyltransferase protein TERM 963 792035 - 791998 - T 100 -14.1 -4.12532 | opp_overlap 791999 792001, overlap 792001 TCCCGGATAGAGAAA CGACCAACGCCCGGCAC CCTG GTGTCGGGCGTTGGTAT TTTCGAATATAAAAC TERM 964 791999 - 792034 + T 100 -19.8 -4.16943 | opp_overlap 791998 792001, overlap 792001 CCCGGATAGAGAAAC GACCAACGCCCGGCAC CCTG GTGTCGGGCGTTGGTA TTTTCGAATATAAAA TERM 965 792032 - 792001 - T 100 -20.2 -3.09116 | opp_overlap 791999 792001, overlap 791998 CGGATAGAGAAACGA CCAACGCCCGGCAC CCTG GTGTCGGGCGTTGG TATTTTCGAATATAA TERM 966 792001 - 792032 + T 100 -22.4 -3.68378 | opp_overlap 792001 791998, overlap 791999 CGGATAGAGAAACGA CCAACGCCCGGCAC CCTG GTGTCGGGCGTTGG TATTTTCGAATATAA Atu0795 792285 - 792052 - | hypothetical protein TERM 967 792172 - 792210 + g 95 -11.8 -4.65933 | gap 1, overlap 792173 CCGCTTGCGGCAGGA CTGGCGCAGGCCGGAGA CCGCCA TTTCCG-CCTGCGCCAA TTTCTTTTCCCCATC TERM 968 792173 - 792209 + g 86 -15.3 -3.38836 | gap 1, overlap 792172 CGCTTGCGGCAGGAC TGGCGCAGGCCGGAGA CCGCCA TTTCCG-CCTGCGCCA ATTTCTTTTCCCCAT Atu0796 793092 - 792337 - | putative peptidase Atu0797 793752 - 793141 - | hydrolase mutY 794852 - 793749 - | A/G-specific adenine glycosylase TERM 969 794129 - 794139 + g 71 -8.2 -4.05875 | opp_overlap 794119 CGAAAGCAGCCCCGA GCCG CAC CGGC TTTGCCTTTTTTGCG Atu8137 794951 - 795478 + | hypothetical protein Atu0800 795607 - 796287 + | hypothetical protein TERM 970 796335 - 796307 - f 86 -12.4 -3.87869 | gap 1, opp_overlap 796308, overlap 796308 CGAAGCCTTCAGAAA GCGGGCG-GCGGA TATT TCCGCACGCCCGT TTTTTATTGCCCATC TERM 971 796308 - 796334 + F 100 -15.9 -5.45652 | gap 1, opp_overlap 796307 796308 GAAGCCTTCAGAAAG CGGGCG-GCGGA TATT TCCGCACGCCCG TTTTTTATTGCCCAT TERM 972 796334 - 796308 - f 87 -15.9 -2.924 | gap 1, opp_overlap 796308, overlap 796307 GAAGCCTTCAGAAAG CGGGCG-GCGGA TATT TCCGCACGCCCG TTTTTTATTGCCCAT TERM 973 797006 - 796991 - g 71 -9 -3.72989 | AAAGCCAGATCGAAA GCCTGA AACG TCAGGC GCGCCAGGCCAACCG smc 796372 - 799839 + | chromosome segregation protein TERM 974 799999 - 800040 + T 100 -25.3 -4.62783 | opp_overlap 800002, overlap 799973 800003 TTCCTGTACCGGATG GAATGCCTTGCGAGGCCGC TGCC GTGGCCTCGCAAGGCTTTC TTTTTGGGGTGCATG TERM 975 800037 - 800002 - T 100 -19 -3.06796 | opp_overlap 799999 800003 CTGTACCGGATGGAA TGCCTTGCGAGGCCGC TGCC GTGGCCTCGCAAGGCT TTCTTTTTGGGGTGC TERM 976 800003 - 800036 + T 100 -24.7 -4.87389 | opp_overlap 800002, overlap 799999 TGTACCGGATGGAAT GCCTTGCGAGGCCGC TGCC GTGGCCTCGCAAGGC TTTCTTTTTGGGGTG Atu0802 801244 - 800273 - | hypothetical protein TERM 977 801850 - 801862 + G 71 -6.9 -4.18018 | CGCTGGGCCATGATG CGGGT GAT GCCCG TTTTGCCTGGGACAG TERM 978 801975 - 801963 - g 80 -10.5 -4.06384 | CTCGAAGATGAGAAA GGCCG CCT CGGCC ATGAATACGATACCG TERM 979 803844 - 803860 + G 71 -9.3 -3.767 | ACTTTCGGCATTTCG CGCGACG ATG CGGCGCG TTTCATCAATACCTA ppdK 801471 - 804197 + | pyruvate phosphate dikinase TERM 980 804244 - 804262 + T 78 -12.4 -3.28712 | opp_overlap 804232 CATGTCGCGGTTCAT CTGCGCCT GCC AGGCGCGG TTGTCGGCGCGGCGG TERM 981 805099 - 805133 + T 95 -11.4 -4.60255 | overlap 805101 GGGTGGCGCACGTTA TTTACGGTGCGCTTCG AAG TGGAGCGCACCGTATC TTTTTGACCAGTTCT TERM 982 805101 - 805131 + T 100 -18.4 -3.91164 | overlap 805099 GTGGCGCACGTTATT TACGGTGCGCTTCG AAG TGGAGCGCACCGTA TCTTTTTGACCAGTT Atu0804 806516 - 805152 - | proton/glutamate transport protein TERM 983 806483 - 806472 - G 71 -5.8 -4.41241 | GAAATTGCGATAAAA GGGT TTCG ACCC GGAGGAGCCGGCGGA Atu0805 806549 - 807022 + | hypothetical protein TERM 984 807340 - 807352 + G 89 -4.7 -5.18726 | CGCTATCTCGGTCTT GCGGC GCT GGCGC TTTTTCTTGTCGCCG TERM 985 807550 - 807570 + G 70 -3.2 -4.67607 | overlap 807542 TCCGCCCTGCCACTC GGCGTCGT TGGTT ATGGTGCC TTTCTTTATTGGCAG TERM 986 807800 - 807788 - g 85 -3.3 -5.40072 | CCGCCGCCAAAAAAA TGGCC GCA GCCCA GTCCATCCGCATTAT Atu0806 807277 - 808197 + | hypothetical protein Atu0807 809284 - 808376 - | metallo-beta-lactamase superfamily protein TERM 987 808456 - 808493 + g 76 -12.5 -3.37796 | opp_overlap 808471 808472 TCAGATCCTCGATAT GCGCCAGCACGGAAAGG GCGG CCGCGCCGTGCAGGCGC TTGTCGGTGCTGGCA TERM 988 809336 - 809317 - R 83 -10 -4.11394 | gap 1 ATGCCATGCCGAAAA TGCCGGCGG CAC CCGCCG-CA CAATCGCCAAGCCCT TERM 989 809375 - 809389 + r 71 -5.7 -4.37658 | GCCTGCGGCCCGGCA CCCAA AAAGC TTGGG TTTTGTGAAAAAATT Atu0809 809886 - 809575 - | hypothetical protein Atu0810 810157 - 809876 - | hypothetical protein TERM 990 810322 - 810297 - R 100 -14.7 -5.06414 | CGCCTCCAACAAAAA CGCCGCGCATC CAGA GACACGCGGCG TCCAATCTTAAATTT mqo 811984 - 810350 - | malate:quinone oxidoreductase Atu0812 812192 - 812401 + | hypothetical protein TERM 991 812404 - 812425 + T 100 -14.4 -3.97511 | opp_overlap 812398 812404 CCCGGAAAAGTGAAA GGCCCGCC GTTTCG GGCGGGCC TTGTTGTGTTCGGTC TERM 992 812425 - 812404 - T 100 -14.4 -3.92659 | opp_overlap 812404, overlap 812398 CCCGGAAAAGTGAAA GGCCCGCC GTTTCG GGCGGGCC TTGTTGTGTTCGGTC Atu0813 812876 - 812454 - | hypothetical protein TERM 993 813233 - 813249 + H 74 -2.9 -4.83518 | overlap 813234 GCTTGAAGCCTTGTG TGTCAGG CTT TCTGGCG TTTTATCTTCTTATT TERM 994 813520 - 813489 - H 100 -14.4 -3.91911 | GTCACCCGAACGAAA GAGGCCCGTCGCTC CGCC AAGCGCCAGGCCTC AATGTCGCGGCGGCC TERM 995 813704 - 813673 - g 100 -17.4 -5.14563 | opp_overlap 813673 813675, overlap 813697 GTCGCGATCAAAAAA GAGGCCCGCTGTTC TCTC GAACAACGAGCCTC TGTTGGGTCGCCTGG TERM 996 813673 - 813704 + G 72 -13 -3.09327 | opp_overlap 813673 813697, overlap 813675 GTCGCGATCAAAAAA GAGGCCCGCTGTTC TCTC GAACAACGAGCCTC TGTTGGGTCGCCTGG Atu0815 813644 - 813805 + | hypothetical protein TERM 997 813819 - 813809 - T 73 -5.4 -4.64144 | overlap 813799 AACAACCTGTAAAAA TCAG GGG CTGA TGGATCGGAAAGCGC TERM 998 814003 - 813983 - T 100 -16.9 -5.35815 | opp_overlap 813983 CAGACCAAACAAAAA GGCGACCAC ACC GTGGTCGCC TTTTGCCGTTCATGT TERM 999 813983 - 814003 + T 100 -16.9 -4.21098 | opp_overlap 813983 CAGACCAAACAAAAA GGCGACCAC ACC GTGGTCGCC TTTTGCCGTTCATGT cysN 815511 - 814027 - | sulfate adenylate transferase, subunit 1 TERM 1000 814414 - 814433 + g 76 -9.2 -4.08767 | overlap 814423 AGGCTGGACGCTGAC GCGCTGGC GGCG GCTGGCGC TTTTCAGCCAGTAGC Atu0817 816464 - 815511 - | sulfate adenylyltransferase subunit 2 cysH 817254 - 816493 - | phosphoadenosine phosphosulfate reductase TERM 1001 816588 - 816613 + g 78 -13.9 -3.14344 | TCTCCCACCACCATC GTCCGGCGCGC TCAG GCTCGCCGGGC TTGATGGCGCGCGTA Atu0819 817480 - 817920 + | hypothetical protein TERM 1002 818054 - 818085 + F 76 -5.1 -4.70266 | overlap 818055 818075 TATGCTGCGCTGTAT TTGTTGCCCGGGA AAACGC TCTCGGGAAACAC TTTTTCGATCGTATT Atu0820 818166 - 819191 + | ABC transporter, substrate binding protein (sulfate) TERM 1003 819249 - 819278 + F 76 -8.7 -3.96148 | gap 1, opp_overlap 819248 819247, overlap 819251 AAGAGAAAAGAACCT G-ATCGACCGGA CAATTGT TCCGGTCGATAC TTTATAATAAACGCC TERM 1004 819251 - 819275 + F 72 -11.5 -3.04122 | opp_overlap 819248 819247, overlap 819249 GAGAAAAGAACCTGA TCGACCGGA CAATTGT TCCGGTCGA TACTTTATAATAAAC cysT 819388 - 820245 + | ABC transporter, membrane spanning protein Atu0822 820238 - 821110 + | ABC transporter, membrane spanning protein Atu0823 821122 - 822162 + | ABC transporter, nucleotide binding/ATPase protein TERM 1005 822297 - 822317 + T 79 -13.3 -2.75064 | overlap 822295 822282 CTGTCCTGCCGGACA TCTCCCCCT CAA GGGGGGAGA TCGTTCCGTGGCAAG Atu0824 822823 - 822482 - | hypothetical protein TERM 1006 822717 - 822700 - G 87 -10.5 -4.39571 | opp_overlap 822700 TGCACAAACGGAAAA GGGCCGC CAAA GCGACCC TTCCATGAGTTTGGT qor 823915 - 822932 - | quinone oxidoreductase Atu0826 825845 - 824034 - | hypothetical protein TERM 1007 824416 - 824401 - G 89 -11.8 -4.20367 | CCGGCGAAGAAATAA CGGCGC ATCA GCGCCG AAAACAGGGTGATGG Atu0827 826254 - 826018 - | hypothetical protein TERM 1008 826543 - 826561 + H 89 -3 -5.5604 | overlap 826544 GATCCATCGCAAATC CGCGACAT AAA ATGGCGCA TTTTTTATTGATTGA betI 826620 - 827240 + | transcriptional regulator BetI betB 827252 - 828733 + | betaine aldehyde dehydrogenase betA 828964 - 830613 + | choline dehydrogenase TERM 1009 830623 - 830664 + T 71 -8.1 -3.88583 | opp_overlap 830630, overlap 830630 CGCTGAGGGTCAATG GTAATCATCCTCGCGCT GGTGGCGG ATCGCGAGGATTGTTAC TTTCTCGGCACTTTC TERM 1010 830729 - 830743 + T 73 -5.7 -4.45485 | opp_overlap 830717 830728 830724 AATGGAATAAGAAAC TCCCT CAGAA AGGGA TTTTCTGCATCTACT Atu8138 831188 - 830913 - | hypothetical protein Atu0832 831362 - 832678 + | chloride channel protein Atu8139 833480 - 832683 - | hypothetical protein Atu0834 833509 - 834507 + | hypothetical protein gst 834645 - 835265 + | glutathione S-transferase gst 836154 - 835495 - | glutathione-S-transferase TERM 1011 835973 - 835938 - G 73 -9.8 -3.57792 | gap 1 CCATGGATTCGTAAA GCACCATGCCGT-CATC CTC GATGCAGGGAATGGTGC CCATCGGGTTGACGG Atu0837 836754 - 836239 - | MarR family transcriptional regulator TERM 1012 836274 - 836287 + g 76 -9.5 -4.08216 | opp_overlap 836284 TGAGCACGTCCGCAT CCGGC GAAA GCCGG TTTTCAAAACGGTCG TERM 1013 836852 - 836821 - H 73 -5.2 -4.65838 | overlap 836822 836823 CACAGATGTCAAAAA CTTGCCATTGACAT ATAT ATGCCAATAGCACA CAAATTGTCGCAGCA TERM 1014 838417 - 838369 - g 73 -10.7 -3.57144 | GCGTTGATGCTGAAA CCGGTGCGCCTGCCGGCGGCGGT TGA AGCGAAGCCGGCGGAAGCAGCGG GAGAGTAGGAACGAT Atu0838 836902 - 838425 + | MFS permease TERM 1015 838765 - 838779 + G 81 -7.8 -4.67353 | overlap 838767 GCCGAAGGGGCTTTA TTGCCC GGC GGGCGA TTTTTACATCGATCC TERM 1016 839412 - 839400 - g 80 -3.3 -5.02074 | CGACGCTGGAAAAAA GCAAC CCC GCCGC CTTTAAGGGTGCCAT Atu0839 838736 - 839731 + | hypothetical protein TERM 1017 840653 - 840670 + G 80 -11.3 -3.737 | opp_overlap 840652 GGTAACGGCGAAGAT GCGGGAT GACT ATCCCGC TTTCATCCGCGCTTA TERM 1018 841157 - 841186 + G 78 -9.9 -3.87551 | gap 1, opp_overlap 841142, overlap 841158 841182 GGTCGAGCGTTTCGG CCCGGTGCGG-GCG GTG CGCGCCACACCGGA TTTCGGTTTCGTGCT TERM 1019 841158 - 841185 + G 75 -13.4 -2.91807 | gap 1, overlap 841157 841182 GTCGAGCGTTTCGGC CCGGTGCGG-GCG GTG CGCGCCACACCGG ATTTCGGTTTCGTGC Atu0840 839733 - 841358 + | ATP-dependent DNA ligase TERM 1020 841595 - 841629 + G 70 -4.2 -4.56597 | gap 1 TGACCCGGCGAAGCC TGCTGGCCGGTGCCA TGGGTC TGTCGGCGGCC-GCA TTTTTACCACCCCGC Atu0841 841513 - 842478 + | hypothetical protein Atu0842 843304 - 842516 - | hypothetical protein TERM 1021 843451 - 843417 - R 95 -12.7 -4.18908 | opp_overlap 843419, overlap 843418 ATACGCTGAAAACAA GCCGGCCGAGCCCGG ATAAA CGGGGCTCGGCCGTT TTCGGAAAAGCTGGG TERM 1022 843450 - 843418 - R 100 -16.2 -3.10622 | opp_overlap 843419, overlap 843417 TACGCTGAAAACAAG CCGGCCGAGCCCGG ATAAA CGGGGCTCGGCCGT TTTCGGAAAAGCTGG TERM 1023 843419 - 843449 + r 100 -19.7 -4.07885 | opp_overlap 843418 843417 ACGCTGAAAACAAGC CGGCCGAGCCCGG ATAAA CGGGGCTCGGCCG TTTTCGGAAAAGCTG Atu0843 846185 - 843468 - | P type cation (metal) transporter, ATPase component TERM 1024 844940 - 844962 + g 70 -3.2 -4.63218 | TGCGCACCTGATCGG CGGCGATCTG CCG CAGCGAGCCG TTTTCTTCCACCAGC TERM 1025 845978 - 845998 + g 78 -4.6 -4.77165 | GCTTGCGCAACGTAT CCTCGATC TTTTC GACCGGGG TTTTATTCTCGGCAA Atu0844 846354 - 847262 + | hypothetical protein Atu0845 847373 - 848146 + | hypothetical protein TERM 1026 848164 - 848192 + T 83 -7.4 -4.61231 | opp_overlap 848170, overlap 848170 848189 848190 CGAAAACTCCTCGCA TAAAAAGGCGGC CTCGT GCCGCCTTTCTC TTTTTCGGCCTATGG TERM 1027 848186 - 848170 - T 100 -10.8 -4.82901 | opp_overlap 848164 848170 CTCCTCGCATAAAAA GGCGGC CTCGT GCCGCC TTTCTCTTTTTCGGC TERM 1028 848170 - 848186 + T 95 -10.8 -4.55887 | opp_overlap 848170, overlap 848164 CTCCTCGCATAAAAA GGCGGC CTCGT GCCGCC TTTCTCTTTTTCGGC ohrR 848660 - 848202 - | MarR family transcriptional regulator TERM 1029 848820 - 848787 - H 80 -9.1 -4.1466 | gap 1, overlap 848790 848792 ATTCAATGTGCAAAA CTATATTGCGTACAAT TTA ATTGTACGCTATA-AG GCTTCCAACATCAAC TERM 1030 848818 - 848790 - H 76 -11.9 -3.09718 | overlap 848787 848792 CAATGTGCAAAACTA TATTGCGTACAAT TTA ATTGTACGCTATA AGGCTTCCAACATCA ohr 848853 - 849275 + | organic hydroperoxide resistance protein TERM 1031 849311 - 849329 + F 95 -13.1 -4.08557 | GATTATAAATCTTGG GGCCGGG TTTAT CCCGGCC TTCTTGTTTACAGAA Atu0848 849385 - 849768 + | hypothetical protein Atu0849 849830 - 850489 + | hypothetical protein TERM 1032 850466 - 850496 + T 86 -12.5 -3.71848 | overlap 850467 TTCGCCGGCGATCCA CGCCTCGCCAGCC TGCTC GGCTGACGAGGCA TTGTTGGTGGGGAGC TERM 1033 850467 - 850495 + T 86 -16 -2.82895 | overlap 850466 TCGCCGGCGATCCAC GCCTCGCCAGCC TGCTC GGCTGACGAGGC ATTGTTGGTGGGGAG Atu0850 851874 - 850513 - | ABC transporter, nucleotide binding/ATPase protein TERM 1034 851318 - 851336 + g 71 -5.9 -4.3467 | overlap 851306 851320 AGCTTGGCCGCCTGC CGGCGCA ATTGC TGCGCGG TTTTCATGTCGCGCT Atu0851 852878 - 852456 - | hypothetical protein Atu0852 853410 - 852964 - | MarR family transcriptional regulator TERM 1035 853529 - 853498 - H 70 -7.1 -4.16814 | TCAGCACAGAAATAA GCGGCGCCCTTCG GTGGAG CGGAGTGTGCCGC GGTGAAAGACGGATC TERM 1036 854036 - 854025 - g 76 -5.8 -4.60487 | opp_overlap 854025 GAGGACGTGGAAAAA GGTG AAAT CACC TATAATTACCGCGAC Atu0853 853560 - 854288 + | hypothetical protein Atu0854 854313 - 854807 + | hypothetical protein TERM 1037 854858 - 854835 - f 80 -11.7 -3.40522 | gap 1 ACGTCTGCATGACAA GCGCCGCCGC GTCCT GCGGCGG-GC ACTTAGCCACACCAC TERM 1038 854962 - 854973 + G 71 -7.2 -4.16279 | overlap 854967 ACGCCCGACATGGAG GCGG CTGC CCGC TTTTACGGTCATGTC Atu0855 854905 - 855684 + | hypothetical protein TERM 1039 855734 - 855704 - T 74 -7.5 -4.07568 | overlap 855707 GCTTCTTCTCGAAAA CGATCTGCCGGGG GTCCG CTCCGGCAGATTA CCGCTCTCTCGATAG TERM 1040 855731 - 855707 - T 72 -11.4 -3.08032 | overlap 855704 TCTTCTCGAAAACGA TCTGCCGGGG GTCCG CTCCGGCAGA TTACCGCTCTCTCGA Atu0856 856496 - 855732 - | LysR family transcriptional regulator TERM 1041 857176 - 857202 + GH 75 -7.9 -4.15044 | TCGCCTCCATCGGTG CGCTGGCCGTC TCGCC GACGGCTGCCG TTTATTGCGCGACGA Atu0857 856749 - 857471 + | oxidoreductase pcaC 857425 - 857958 + | putative carboxymuconolactone decarboxylase Atu0859 857955 - 858305 + | hypothetical protein TERM 1042 858320 - 858356 + T 77 -8.5 -4.07535 | opp_overlap 858322, overlap 858321 ACCGCCGCGACGTTA AAGCGCCGCCCGCCC ATCGAGC GGGTAGGCGGCGCGC TTGTTTCTAGCGCTT TERM 1043 858321 - 858355 + T 76 -12 -3.03798 | opp_overlap 858322, overlap 858320 CCGCCGCGACGTTAA AGCGCCGCCCGCCC ATCGAGC GGGTAGGCGGCGCG CTTGTTTCTAGCGCT TERM 1044 858354 - 858322 - T 100 -16.2 -3.59979 | opp_overlap 858321 858320 CGCCGCGACGTTAAA GCGCCGCCCGCCCA TCGAG CGGGTAGGCGGCGC GCTTGTTTCTAGCGC Atu0860 859925 - 858363 - | hypothetical protein TERM 1045 859654 - 859642 - G 91 -7.7 -4.8048 | opp_overlap 859642, overlap 859651 TTGCTATAGGAAAAA TCGGT GAA ACCGA TCTGTTCGGCGCGTT Atu0861 860151 - 859966 - | hypothetical protein TERM 1046 860206 - 860219 + H 71 -4.5 -4.56597 | overlap 860187 TTAACGTCAGTTATT CGATG TTGG CGTCG TTTTTCAACAGGAGG Atu0862 860240 - 860635 + | hypothetical protein TERM 1047 860656 - 860693 + T 100 -23.5 -3.82202 | gap 1, overlap 860648 860657 GTTTACTCCATCGCA G-GGCGCGGCGGCTGTTC GTT GAACCGCCGCCGCGCCTC TTCTATTTCGGCATG TERM 1048 860657 - 860691 + T 100 -27.2 -3.49232 | overlap 860648 860656 TTTACTCCATCGCAG GGCGCGGCGGCTGTTC GTT GAACCGCCGCCGCGCC TCTTCTATTTCGGCA Atu0863 861074 - 860643 - | hypothetical protein Atu0864 861178 - 861936 + | oxidoreductase TERM 1049 862715 - 862730 + G 71 -6 -4.36914 | overlap 862683 CACGGCCCGCCGAGG CCGCCG TCAT CGCCGG TTTTGTCGACCAGAG TERM 1050 862780 - 862807 + G 80 -11.2 -3.75933 | overlap 862776 GTGCGCCAATTCGGC GTGACGCCCGCT GTTT ACCGGGCGGCAC TTTCGTAAGGTATGT Atu0865 862009 - 862815 + | AraC family transcriptional regulator TERM 1051 863710 - 863756 + G 79 -12.4 -3.54459 | overlap 863711 TTCTCGCATGGTTGA GGCGCAGCTTCGCCGCC-GC TTTCGTGGC GCTGGGGGCGAAGCT-CGCC TTTACCGAGCGTTGA Atu0866 863160 - 863771 + | RhtB family transporter Atu0867 864623 - 863796 - | aldo/keto reductase Atu0868 864882 - 865589 + | hypothetical protein Atu0869 865638 - 866006 + | hypothetical protein tam 866782 - 866012 - | trans-aconitate methyltransferase ilvE 867117 - 867998 + | aminotransferase TERM 1052 868023 - 868055 + F 100 -12.7 -5.06414 | opp_overlap 868022 868021 ACATTGCGTTAAACG CGGCCATGGCAGG CATTCGT CCGGTCATGGCCG TTTTTGTTGCGGCGC TERM 1053 868096 - 868078 - f 90 -4.5 -5.40072 | opp_overlap 868078, overlap 868079 TGCGGCGCAAAAAAA TCCCCAA AAAGA TGGGGGA GTTTAATCCAATTTT TERM 1054 868368 - 868351 - g 72 -12.7 -3.05715 | AATTTCCGCAGTGAA CGTGGCG ACAG CGCCACG GCGCTGACGCTCGAT TERM 1055 869068 - 869049 - g 75 -8.6 -4.18494 | CACCGTTACGGAAAA TCTCGGCA CGAT TGCCAAGA TCGCCTCTGCCGCCA mcpC 868168 - 870525 + | methyl-accepting chemotaxis protein TERM 1056 870536 - 870568 + T 74 -10 -3.61894 | opp_overlap 870539, overlap 870536 870540 870563 TCTGAGGTTCGGAAG C-TACGCCCGCGTCAT CGA ATGGCGCGGGC-TACG TTGTTAACGAGGCTT TERM 1057 870565 - 870539 - T 71 -12.2 -2.52676 | opp_overlap 870536 870536 870540 870563 GAGGTTCGGAAGCTA CGCCCGCGTCAT CGA ATGGCGCGGGCT ACGTTGTTAACGAGG TERM 1058 870540 - 870564 + T 95 -17.9 -2.6563 | opp_overlap 870539, overlap 870536 870536 870563 AGGTTCGGAAGCTAC GCCCGCGTCAT CGA ATGGCGCGGGC TACGTTGTTAACGAG oxyR 871639 - 870752 - | LysR family transcriptional regulator TERM 1059 871538 - 871559 + g 76 -12.3 -3.28712 | gap 1 TATATGCAGGCTGAC GGCC-GGCTG CGT CAGCCCGGCC TTGTCGGCGGCGGCG Atu0874 871736 - 872278 + | acetyltransferase Atu0875 872763 - 872284 - | hypothetical protein sodBI 872849 - 873451 + | superoxide dismutase TERM 1060 873472 - 873504 + F 83 -9.9 -4.16943 | gap 1, opp_overlap 873479, overlap 873474 873477 GGCGAACGGAATTTT TC-GAACACCCGGC CTTCGT GCCGGGTGTTCTGC TTTTGGCATGTCGCG TERM 1061 873474 - 873501 + F 100 -17.1 -3.10545 | opp_overlap 873479, overlap 873472 873477 CGAACGGAATTTTTC GAACACCCGGC CTTCGT GCCGGGTGTTC TGCTTTTGGCATGTC TERM 1062 873477 - 873498 + F 86 -13 -3.68761 | opp_overlap 873479, overlap 873474 873472 ACGGAATTTTTCGAA CACCCGGC CTTCGT GCCGGGTG TTCTGCTTTTGGCAT TERM 1063 874178 - 874194 + G 79 -12.3 -3.42861 | opp_overlap 874164 874163 874174, overlap 874172 CGCCCACAACATGTG GGATGCG CCG CGCATCC TTGATCTTCTCGGTT Atu0877 873564 - 874415 + | hypothetical protein Atu0878 875138 - 874407 - | hypothetical protein TERM 1064 874815 - 874836 + g 70 -5.1 -4.57569 | gap 1, overlap 874815 CGGTTCGGGCAGGGA GG-CGGCGAT CTT GTCGCTGACC TTTTTCGCCGCCTGG TERM 1065 875183 - 875194 + H 78 -2.2 -5.24129 | opp_overlap 875171, overlap 875167 875166 CAACTGACACAACGT TGTC AGTT GGCA TTTTTTATAAGCGGA TERM 1066 875245 - 875214 - H 70 -3.2 -4.6902 | gap 1, overlap 875206 TTATAAGCGGAAAAA CACATT-GAGAAA CAAATGC TTTCCCGAATGTG TCATCATCTTCTTTA Atu0879 875273 - 875917 + | RhtB family transporter Atu0881 876145 - 876552 + | cytochrome C-556 TERM 1067 876569 - 876586 + F 100 -14.1 -4.56597 | opp_overlap 876569 CGAAGCCTCTGAAAA CGCCGCC CATC GGCGGCG TTTTTCGGCACGAAA TERM 1068 876586 - 876569 - f 100 -14.1 -4.09739 | opp_overlap 876569 CGAAGCCTCTGAAAA CGCCGCC CATC GGCGGCG TTTTTCGGCACGAAA Atu0882 876640 - 877560 + | hypothetical protein TERM 1069 878000 - 877985 - f 81 -11.8 -3.53012 | TCGGCCGCGTCTAAA GGCGCG GGGT CGCGCC GGGAGAGGGGTCACC TERM 1070 878088 - 878062 - g 74 -5.7 -4.56597 | opp_overlap 878076 878082, overlap 878046 878064 CCGTTTCCGTAAAAA CAGCCAGCGTC GCGCA GTCGCTGACAG CGATCGTGCTTGGCC TERM 1071 878082 - 878116 + G 70 -4.8 -4.46581 | opp_overlap 878064 878062, overlap 878076 AGCGTCGCGCAGTCG CTGACAGCGATCGTGC TTG GCCTGTTCGTCGTCGG TTTTGTCGGCTTTTC Atu0883 878016 - 878198 + | hypothetical protein TERM 1072 878275 - 878289 + G 71 -7.8 -4.07568 | CGGCGGTTTCGCCGT GTCTGC CAT GCAGGC TTTTGGCACCACGCC TERM 1073 878866 - 878890 + G 74 -4.1 -4.7254 | overlap 878867 CAGCTTCGTCTTCTG GGCGCTAATCG GCA CGTTGAGCGCG TTTTTCCTGAAGCGT Atu0884 878210 - 878920 + | hypothetical protein TERM 1074 878933 - 878968 + G 71 -6.9 -4.19238 | gap 1 TAAGCCCATGCAGGA CGCAGCGGAGTGGAGT GAGGA ACTCGA-TGCGCTGCG TTTTGCCGTTCCCGG TERM 1075 879136 - 879119 - g 71 -6.9 -4.23674 | overlap 879084 GCTCAGCAAGATAAA GCGCGCA AATT TGCCCGC CGGCCGCAGCCTGCA Atu0885 878925 - 879239 + | hypothetical protein TERM 1076 879275 - 879307 + T 91 -15 -3.09492 | TCCGTATTTTGCACT ACCTCATTCCTGTG ACAAG CACAGGAATGAGGG TGTTGGGCTTAGCGG Atu0886 879910 - 879344 - | hypothetical protein TERM 1077 879378 - 879408 + g 89 -11.9 -4.17089 | AAAATCTGAAGTTCC GCCTCGGCTTC CGGACCAAA GAGGCCGAGGC TTTTCAGAATTTCCA Atu0887 880420 - 879932 - | acetyltransferase TERM 1078 880495 - 880467 - R 100 -14 -4.10161 | gap 1, opp_overlap 880474, overlap 880474 CAGGACGTTTGAAAA CAACAAAGCCGCC TGAC GGCGGC-TTGTTG ACAATATGATCTGTC TERM 1079 880489 - 880474 - R 100 -11.8 -4.67697 | opp_overlap 880474, overlap 880467 TTTGAAAACAACAAA GCCGCC TGAC GGCGGC TTGTTGACAATATGA TERM 1080 880474 - 880489 + r 83 -11.8 -3.64487 | opp_overlap 880467 880474 TTTGAAAACAACAAA GCCGCC TGAC GGCGGC TTGTTGACAATATGA Atu0888 881038 - 880625 - | MerR family transcriptional regulator TERM 1081 881046 - 881074 + H 89 -8.9 -4.56775 | overlap 881047 GACAGCATGGCTTTC TCCATATCTCCAG TCT CTAGAGATATGGC TTTTTCACGACCGAT TERM 1082 881047 - 881073 + H 80 -12.4 -3.33744 | overlap 881046 ACAGCATGGCTTTCT CCATATCTCCAG TCT CTAGAGATATGG CTTTTTCACGACCGA Atu0889 881070 - 881483 + | hypothetical protein Atu0890 881576 - 881848 + | hypothetical protein TERM 1083 882201 - 882225 + G 80 -9.9 -4.11394 | overlap 882193 GCTTCAGCTTCGGCA CCGGCAAGTTC GGT GATCTCGCCGG TTTTGCCAGTGCCGT TERM 1084 882426 - 882385 - g 77 -14.5 -2.70932 | CGTGCTGCTGAAGGA TGACCATCACCACGACCGT GGCC ACGGCCACGGCCATGGTCA CGCTTCGCATGCCCA TERM 1085 882837 - 882859 + G 71 -6.1 -4.36914 | overlap 882838 TCGTCGCGATCCATT CGCAGGCGC CGAAA GCGCCGGCC TTTTATAAACAGAAA Atu0891 881927 - 882934 + | cation efflux system protein Atu0892 883232 - 882945 - | hypothetical protein TERM 1086 883336 - 883350 + r 75 -6.4 -4.65895 | AGGGTTGACAGTCGG CGAAGT AGT GCTTCG TTTTTGCATGGAGGG TERM 1087 883490 - 883470 - R 76 -12.6 -2.79796 | TTCGACGTGATTAGA TCCTCGGC ACAGG GCCGAGGA TGACGCCGGGGGCAT TERM 1088 883587 - 883609 + r 86 -10.6 -4.18018 | opp_overlap 883590, overlap 883594 GGACAAGCCCGGGAA TGACGGAGGC GAT GTTTCCGTCA TTTTAAATGCCCGGA Atu0893 884722 - 883625 - | ABC transporter, nucleotide binding/ATPase protein TERM 1089 884050 - 884075 + g 81 -6.2 -4.7629 | gap 1 GCAAAGCCTCGTCCA GATCGTGGGTG ATGAA CACC-ACGGTC TTTTTCAGTTCCTGC TERM 1090 884475 - 884498 + g 78 -13.2 -3.2614 | gap 1, opp_overlap 884470 TCATAGAGAACTTCG CCGGCTG-TCG GGT CGATCAGCCGG TTGATGTGGCGAATC Atu0894 885623 - 884715 - | ABC transporter, membrane spanning protein Atu0895 886875 - 885865 - | ABC transporter, substrate binding protein Atu0896 887127 - 886906 - | hypothetical protein TERM 1091 886990 - 886975 - G 71 -6.8 -4.18197 | ATGGCGCATGGAAAA GCCGAA AAAA TCCGGC GAGAAGATTATCCGC TERM 1092 887357 - 887327 - R 91 -11.8 -4.17048 | opp_overlap 887330, overlap 887329 887330 TTTCGTCCAAAATAA GATCGGGCGACGAT TGG ATCGCCGCCCGTTT CTGCATTCAGCGTGT TERM 1093 887355 - 887329 - R 95 -14.4 -3.68435 | opp_overlap 887330, overlap 887327 887330 TCGTCCAAAATAAGA TCGGGCGACGAT TGG ATCGCCGCCCGT TTCTGCATTCAGCGT TERM 1094 887330 - 887354 + r 100 -15.7 -3.97368 | opp_overlap 887330 887329 887327 CGTCCAAAATAAGAT CGGGCGACGAT TGG ATCGCCGCCCG TTTCTGCATTCAGCG TERM 1095 887354 - 887330 - R 95 -17.9 -2.80579 | opp_overlap 887330, overlap 887329 887327 CGTCCAAAATAAGAT CGGGCGACGAT TGG ATCGCCGCCCG TTTCTGCATTCAGCG ptrB 889471 - 887372 - | protease II Atu0898 889694 - 890095 + | hypothetical protein TERM 1096 890097 - 890113 + F 76 -12.3 -3.03635 | ATCTTTATGACTGAC CGCCGAA ATT TTCGGCG TCTTGAGGAAGTTTA TERM 1097 890933 - 890912 - g 73 -4.3 -4.68593 | opp_overlap 890929 CGGAGGAGGCAAAAA GGCTCGATG CGAC CTTCCAGCC GCTCTGGGCGCTGTT dapA 890200 - 891108 + | dihydrodipicolinate synthase Atu0900 891150 - 891896 + | hypothetical protein TERM 1098 892182 - 892202 + G 71 -5.4 -4.4017 | AAGGCGTGGCCTATG TCTGCGTG ACATC CACGAAGA TTTTCTGCCGCTTCA TERM 1099 892539 - 892521 - g 70 -10.2 -3.53811 | GGGACGCGGCGGAAA GCCTTGCC TCC GGCGAGGC GGTGATCGGCGCGCA ada 892046 - 893182 + | 6-O-methylguanine-DNA methyltransferase Atu0902 894653 - 893493 - | hypothetical protein TERM 1100 893772 - 893717 - G 70 -3.3 -4.65747 | gap 3, overlap 893720 GAATGGTGAAGAAAA CACCCGCCGGCAGCAGCG-CAAGGATCA TGT TG-TCATGGGCGATGATGCCGGCG-ATG GTGAGCGATATGGTC TERM 1101 893935 - 893945 + g 76 -6.8 -4.56597 | opp_overlap 893934 893935 GCCGTGGCGAAATAG GTGC CGA GCAC TTTTTCCACCGAGCC TERM 1102 894703 - 894730 + r 100 -18.4 -4.18018 | CACCTCAGGCGGTTC CGGGGCGGCGCA AATT TCCGCCGCCCCG TTTTAACTCACGCCG Atu0903 895598 - 894738 - | hypothetical protein TERM 1103 895098 - 895070 - G 82 -15.3 -3.26471 | CGACCTGCAGATGAA TGTGGCCGATGGC GGT GCCATCAGCCGCA CCGGTAAAGGCCGTC TERM 1104 895662 - 895676 + H 95 -12.8 -4.15044 | overlap 895655 895654 GATGCTATCGGCCGA CGCCGC TTT GCGGCG TTTGTTAGAGCCGAA TERM 1105 895774 - 895784 + H 71 -8.2 -3.76952 | opp_overlap 895765, overlap 895766 ACATCACCCGCTGGC GCCG CTG CGGC TTTGACTTCGATCAA Atu0904 895877 - 896287 + | hypothetical protein TERM 1106 896373 - 896339 - f 76 -13 -2.70932 | CCCCCCCCCCAAGCA TTTCCAGGAAAAGTGG AAG CCGGTTTTCCTGGAAA TGCGACAAAACAAGA TERM 1107 896674 - 896700 + G 71 -8.1 -4.08216 | gap 2 AGGATTTCGGAGGAT CGGC-TG-AAGGC GGT GCCTTACACGCCG TTTTGCCAGGAATGC dskA 896410 - 896730 + | dnaK suppressor protein TERM 1108 896739 - 896761 + F 70 -5.5 -4.38927 | gap 1, overlap 896741 896741 896746 896747 896748 TTTGTGAGGGTAATT CCGGAGTGCG AGGT CGC-CTCCCG TTTCTTCTCTCCGCC TERM 1109 897050 - 897067 + G 100 -9.1 -5.02074 | TTGTATTTGCGCTCA TCGGCGC GACG GCGCTGA TTTTTTACGCGATGG TERM 1110 897372 - 897382 + G 71 -8.2 -4.04206 | CCGCTACGACCGGGT GGCC ATC GGCC TTTATCTCGCCATGG Atu0906 896956 - 897624 + | hemolysin III Atu0907 897727 - 898224 + | phosphinothricin acetyltransferase Atu0908 898718 - 898311 - | methionine sulfoxide reductase B TERM 1111 900073 - 900089 + G 73 -4.4 -4.67904 | gap 1, overlap 900083 CCGCGGCCATCTCCA TGGCCGG CCTG CCG-CCA TTTTTCGGCTTCCTC TERM 1112 900609 - 900629 + G 71 -6.8 -4.18018 | overlap 900610 CACGTCACGCGGCTT ATCCAGCC CGGCC GGCTGGAG TTTTACGTCACCGCC mnhA 898920 - 901289 + | putative monovalent cation/H+ antiporter subunit A TERM 1113 901439 - 901474 + G 80 -11 -3.75665 | overlap 901441 901444 TCGATCTACGGCATC GCCTATGGCGTGACGG CGGT CCGGCGCGCCATCGTC TTTCATCCGCTCTCG TERM 1114 901441 - 901472 + G 79 -12.2 -3.46088 | overlap 901439 901444 GATCTACGGCATCGC CTATGGCGTGACGG CGGT CCGGCGCGCCATCG TCTTTCATCCGCTCT TERM 1115 901444 - 901469 + G 70 -12.5 -2.87501 | overlap 901441 901439 CTACGGCATCGCCTA TGGCGTGACGG CGGT CCGGCGCGCCA TCGTCTTTCATCCGC mnhB 901286 - 901705 + | putative monovalent cation/H+ antiporter subunit B mnhC 901705 - 902082 + | putative monovalent cation/H+ antiporter subunit C mnhD 902102 - 903679 + | putative monovalent cation/H+ antiporter subunit D TERM 1116 904123 - 904104 - g 72 -2.8 -4.77157 | gap 1, overlap 904107 904109 CGAAGCCACGAAAAA CGACATCCG AAA CGGCT-TCG AAAGAAAGATCATGG mnhE 903676 - 904155 + | putative monovalent cation/H+ antiporter subunit E mnhF 904152 - 904538 + | putative monovalent cation/H+ antiporter subunit F mnhG 904535 - 904867 + | putative monovalent cation/H+ antiporter subunit G TERM 1117 904871 - 904901 + F 77 -7.6 -4.27584 | opp_overlap 904877 904878, overlap 904878 AAGAAAATGTGAAGT TGAAAATCCCCC TAATAAT GGGGGGTATTCA TTTTCAATTACCACT ros 905301 - 905729 + | transcriptional regulator TERM 1118 905844 - 905861 + F 100 -12.7 -5.4505 | GTATGAAAATGTCCA GCCGGTC CATC GACCGGC TTTTTTATTGCCGCG Atu0917 906032 - 906454 + | hypothetical protein TERM 1119 906809 - 906857 + G 78 -2.2 -5.14563 | gap 1, opp_overlap 906786, overlap 906810 GCGCAACCTCAACAC CGCGCCGCTCACCAGC-CTTTCA CGAT TGAAGGAGCGGGATGGCAGCGCA TTTTTTCCTGAAGAC TERM 1120 906879 - 906904 + G 71 -7.5 -4.25104 | gap 1, opp_overlap 906872, overlap 906880 CCTGAAGACGCGCTG GCGGCGGGCGAG CGC CTCGC-TGCCGA TTTTCATCGCGGCCA Atu0918 906447 - 907283 + | hypothetical protein Atu0919 907721 - 907305 - | hypothetical protein TERM 1121 907832 - 907806 - R 100 -16.7 -5.07486 | CATGTGCAAGAAAAA GCCCACGGAAA ACAGG TTTCCGTGGGC AAGTCAGGCAGGCAG Atu0920 908359 - 907934 - | hypothetical protein TERM 1122 908953 - 908979 + GH 84 -3.6 -5.18726 | overlap 908944 TTGCACGCCTGCGCC GGCTGATCGC CTTCAGC GCCGTCGGCC TTTTTATTGTACCAG TERM 1123 909027 - 909060 + GH 74 -8.2 -4.03234 | gap 3, overlap 909026 909034 909042 TTCAGCCCCGCTATC GCGCT-GC-CCATCGGC GCG GCCG-TGGTGCTGGCGC TTTATCTCGCCGCCG TERM 1124 909232 - 909200 - gH 71 -5.3 -4.41494 | opp_overlap 909221 CACCCTCAATGAAAA CGGTCTCGTCGAGCG CGT CTCCGGCCGCGACCG CGACAGTTTCCCCGC TERM 1125 909870 - 909852 - gH 75 -2.2 -4.87291 | CAGGCGAAGGAAAAA GGCCTGAC ATT GACCAGCC GCATCCAGCGCGGTA Atu0921 908847 - 910379 + | two component sensor kinase TERM 1126 910405 - 910388 - gf 71 -5.5 -4.43307 | gap 1, opp_overlap 910388 910393 CGCCTAAGAAAACAA CGGC-CCA GAT CGGCGCCG GATTTGTTTCCTTGG TERM 1127 910533 - 910551 + GF 76 -11.7 -3.14132 | GCTCTGGTATCAGCC GGGCGTC CACCC GACGCCC TTCCTGCGCACGCGC TERM 1128 910695 - 910668 - gf 74 -7.6 -4.07568 | gap 1, overlap 910653 GCGGCCGGCGGAAAA CGAGACGGCGCAG CCT CCG-GCCGCCGCG GAAACCGCGGCACTT Atu8087 910342 - 911262 + | putative peptidoglycan binding protein TERM 1129 911622 - 911609 - g 70 -3.7 -4.64861 | overlap 911611 GCTGTGGAAAAGAAA GGCGC GGAG GCGGC GGGGGCGATCTTCGT Atu0922 911525 - 911881 + | hypothetical protein Atu0923 912882 - 911938 - | hypothetical protein TERM 1130 912387 - 912398 + g 74 -5.8 -4.45738 | overlap 912372 912389 GCGCCATCTGCTTGA TGCG CCGG CGCA TTTCTTCTTCGAATG TERM 1131 913333 - 913318 - H 80 -9 -4.08767 | TGGATCGTGCGAAAA CCAGTC TGTG GACTGG CCTATGCGCAATGTG Atu0924 913430 - 913624 + | hypothetical protein Atu0925 914193 - 913645 - | hypothetical protein Atu0926 914773 - 914186 - | hypothetical protein TERM 1132 914480 - 914466 - G 73 -9.2 -3.88583 | overlap 914455 914467 TAAAGCGTCCAGAAA CGCGCC GGC GGCACG GCGCCGGCCAGACGA lysE 915505 - 914897 - | LysE family transporter TERM 1133 915280 - 915270 - G 72 -2.4 -4.85918 | TACCAGATAAGAAAA GCCG CCC CCGC ATAACGCATGATGGG Atu0928 915880 - 916785 + | chromosome replication initiation inhibitor protein Atu0929 918441 - 917134 - | amide hydrolase TERM 1134 917879 - 917891 + g 83 -4.7 -5.09426 | overlap 917880 TGCCGGATCGTCGCA TCGCC AAA GGCGC TTTTTTCAAGTTCGG Atu0930 919900 - 918455 - | hypothetical protein TERM 1135 918620 - 918663 + g 80 -11.6 -3.72576 | gap 1, overlap 918621 918624 GATGTCATCGGCCAG ATGGCGGT-TGCCCACGCCGG CAA CCGGGGTGGGCGTGCCGTCGA TTTCATCGAGGCGCG TERM 1136 918621 - 918662 + g 77 -15.1 -2.83403 | gap 1, overlap 918620 918624 ATGTCATCGGCCAGA TGGCGGT-TGCCCACGCCGG CAA CCGGGGTGGGCGTGCCGTCG ATTTCATCGAGGCGC TERM 1137 918624 - 918659 + g 78 -15.4 -2.67803 | gap 1, overlap 918621 918620 TCATCGGCCAGATGG CGGT-TGCCCACGCCGG CAA CCGGGGTGGGCGTGCCG TCGATTTCATCGAGG TERM 1138 919317 - 919307 - G 72 -2.4 -4.7497 | CGCATCGATGAAAAA CGCC GTC GCCG TCAGGTCATCTACAC Atu0931 922519 - 920246 - | penicillin binding protein TERM 1139 920440 - 920480 + g 81 -13.5 -3.35679 | gap 3 CGGATGCGGCGGCGA CCTG-TGCCGA-AGGCTGCG GACG CGC-GCCTGTCGGCAGCAGG TTCTGGATGCCGGGA TERM 1140 921255 - 921225 - G 72 -11.1 -3.35371 | overlap 921227 TAGACCTTGAAGGAA GAGCC-CGGCTGGCG CAG CGCC-GCCGTGGCGC GGTTGAACTGGCTTT TERM 1141 921253 - 921227 - G 74 -12.3 -3.24329 | overlap 921225 GACCTTGAAGGAAGA GCC-CGGCTGGCG CAG CGCC-GCCGTGGC GCGGTTGAACTGGCT TERM 1142 921759 - 921746 - G 74 -3.7 -4.86731 | overlap 921747 921748 CTTGCCGAAATAAAA CTGCG CCGC CGCCG CCGCGCCAAAGGTGC Atu0932 922698 - 923177 + | hypothetical protein Atu0933 923289 - 924113 + | beta-lactamase class D Atu0934 924476 - 924141 - | hypothetical protein Atu0935 924748 - 924473 - | hypothetical protein TERM 1143 924960 - 924947 - g 77 -3.8 -5.00616 | CCCTTGCCGAAAAAA CCTG GCTGGA CAGG TTCACCTCGCTTTTG Atu0936 924856 - 925464 + | methyltransferase Atu0937 925700 - 928225 + | copper transporting ATPase cueR 928267 - 928644 + | MerR family transcriptional regulator TERM 1144 928948 - 928929 - f 71 -6.4 -4.24002 | GCGCAAATGTGAAAA TGTGCTAC ATAT GTTGCACA ATGCAGGAGCGCAGA pemI 928967 - 929233 + | PemI protein pemK 929233 - 929592 + | PemK protein TERM 1145 929917 - 929882 - g 70 -9.8 -3.55444 | gap 2, opp_overlap 929876 929874 929885, overlap 929883 GGTTCACTCGGCAAA CGACCGGCGGGGCAGG TGGGTT CCTG--CCGCCGGTCA ATTCCCTGATTTCGC Atu0941 929690 - 929926 + | hypothetical protein TERM 1146 930057 - 930047 - g 72 -2.4 -4.84017 | AATGGTGGAGAAAAA CGGC TGG GGCG AATTGCTGAGCGGGG TERM 1147 930153 - 930184 + G 100 -10.1 -4.87665 | gap 1 GTCGTCACGGCCTTG CCCGTCGCCGTCAA CGACA TCGGCGGCG-CGGG TTTTTATAGCTGGGC Atu0942 930033 - 931415 + | MFS permease Atu0943 931667 - 931494 - | hypothetical protein cscA 933367 - 931736 - | sucrose hydrolase TERM 1148 933330 - 933346 + g 85 -5.8 -5.09426 | gap 1, opp_overlap 933328 933330 933331, overlap 933331 TTGGAGAAAGAGACA G-CGCCG GCTT CGGCGTC TTTTTTCGCCTTCAG TERM 1149 933331 - 933344 + g 79 -9.5 -4.17355 | opp_overlap 933330 933328 933331, overlap 933330 TGGAGAAAGAGACAG CGCCG GCTT CGGCG TCTTTTTTCGCCTTC TERM 1150 934665 - 934688 + G 78 -10.4 -3.97674 | gap 1 CCACCGAGGAGGAGG GCGACATGGAT CTG ATCCA-GTCGC TTCTTTCACTGATGC TERM 1151 934709 - 934719 + G 71 -6.8 -4.14511 | TCACTGATGCAGGCA TCGG AAG CCGA TTTTACACTGACCTT Atu0945 933626 - 935086 + | hypothetical protein Atu0946 936337 - 935237 - | dehydrogenase Atu0947 936462 - 936893 + | AsnC family transcriptional regulator Atu0948 937293 - 936925 - | hypothetical protein TERM 1152 937357 - 937334 - H 86 -11.8 -3.85817 | opp_overlap 937325 937325 ATCTTTCGGGAGAAA TCCGGTTTCC ACGA GGAAACCAGA TAACCGAAAAGTGCT Atu0949 937449 - 938288 + | hypothetical protein Atu0950 939976 - 938312 - | hypothetical protein Atu8088 940187 - 940711 + | hypothetical protein TERM 1153 940693 - 940723 + F 75 -6.1 -4.65895 | CGCTGCGTTGGGCAC TTCCGTCGGGTCT GGCTG AGGCATGGCGGAA TTTTTGACTGAAACC Atu0951 940766 - 941974 + | large terminase phage packaging protein TERM 1154 942018 - 942034 + F 77 -7.9 -4.30719 | opp_overlap 942011 942021, overlap 942021 CTATCGAACCGCAAA CAAGCGG GTG CCGCATG TTTCTTCTCCCCGGC TERM 1155 942074 - 942021 - f 100 -21.9 -3.96618 | gap 1, opp_overlap 942018 942021 942035, overlap 942011 TCGAACCGCAAACAA GCGGGTGCCGCATGTTTCTTCTCCCC GGC GGGGAGAAGAAATCTTCGGCA-CCGC ATCCGCCCAAAAGCG TERM 1156 942035 - 942061 + F 100 -18.2 -3.01791 | opp_overlap 942021 AGCGGGTGCCGCATG TTTCTTCTCCCC GGC GGGGAGAAGAAA TCTTCGGCACCGCAT TERM 1157 942447 - 942462 + G 74 -5.4 -4.45168 | GACGAGGCGCGATTC TTCGCG TCGG TGCGAA TTTCTATTTTCGGGG Atu8140 942423 - 943076 + | hypothetical protein Atu0953 943135 - 943443 + | hypothetical protein TERM 1158 943563 - 943600 + F 83 -9.7 -4.07568 | opp_overlap 943566, overlap 943566 CTGTGCTTGTCACAG GAATCCAGTCGACGCGC GTCT GCGCGGCGAGAGGACTC TTTTCAGCCAAAGGA TERM 1159 943702 - 943687 - f 76 -3.2 -5.07486 | GAGCCGGAATAAAAA CAAGGA CAAT TCCATG CGATTTCCTTTCTCC TERM 1160 943883 - 943867 - g 70 -3.6 -4.72272 | overlap 943869 GGGTTTCATGAAAAA CCCGGT CGCCC ACCGCG CCGCCCGCATGGTGG TERM 1161 944221 - 944237 + G 71 -6.5 -4.1899 | overlap 944171 GCGCGACGGGCTGGG GCTTCTG CAT CTGAAGC TTTTCCATCCGCTGG TERM 1162 944644 - 944656 + G 71 -6.2 -4.4009 | TGCCAATTACCAGGA GGCG AATCG CGCC TTTTATCGCCTCACC gp34 943700 - 944866 + | phage head portal protein TERM 1163 945015 - 945001 - f 81 -8.5 -4.3739 | overlap 944988 CAGGCGTGCAGAAAA CGCCG GCGGG CGGCG CGGTGCGTCGGCCCG Atu0955 945062 - 945382 + | hypothetical protein gp35 945432 - 946004 + | phage prohead protease TERM 1164 946301 - 946289 - g 100 -10.5 -5.00616 | overlap 946291 CTCGCGCTCAAAAAA GCGCG ACC CGCGC TTGGCCGCAAGGACG TERM 1165 946570 - 946553 - g 75 -2.5 -5.00616 | overlap 946555 GCTGTGCTGAAAAAA CCCTTCG CACT CGGTGGG ATGACGACCGGCTGG gp36 946037 - 947305 + | phage phi-C31 major capsid gp36-like protein Atu0958 948131 - 947277 - | hypothetical protein TERM 1166 947368 - 947352 - G 87 -10.1 -4.33417 | overlap 947348 GCCAGGGAGAAGAAA CAAGCGG CAC CCGCTCG CTCCCCATTCGACCA Atu0959 948308 - 948703 + | hypothetical protein Atu0960 949817 - 948711 - | MFS permease TERM 1167 949272 - 949260 - G 77 -3.3 -4.93365 | TGCCAGAAGTAAAAA TGCGC GAC GCGTA TCGACTGGCACCTTT TERM 1168 949387 - 949376 - G 71 -5.8 -4.37527 | GCAGAAGCACGAAAA GCTG AAAA CAGC CGTAAAAGATTAGGG TERM 1169 949473 - 949454 - G 77 -3.4 -4.94992 | overlap 949457 TGAAAGGCAGAAAAA CAGCGCCC GAAA GGCCGGTG AACACCATGAGCAAC Atu0961 950690 - 950076 - | hypothetical protein TERM 1170 950225 - 950235 + g 70 -4.6 -4.56597 | overlap 950224 CTAGCGATGCACTGG TGCG CGG CGCG TTTTTCGCCGGCACC TERM 1171 950988 - 951027 + r 84 -13.4 -3.06696 | gap 1, overlap 950993 GTCAGGGCATCTTTC GCGGCCGGCCGC-CCTTCG CAC CGTTGGCGCGGCTGGCGGC TGTCTTCGCCGGGGA TERM 1172 950993 - 951029 + r 84 -13.5 -3.01712 | overlap 950988 GGCATCTTTCGCGGC CGGCCGCCCTTCGCACC GTT GGCGCGGCTGGCGGCTG TCTTCGCCGGGGAAC Atu0962 951378 - 950974 - | hypothetical protein TERM 1173 951674 - 951664 - H 78 -6.8 -4.56775 | ATGGTTTTTTAAAAA GCTG TTT CAGC ACCATGCATTCCCCA TERM 1174 952037 - 952060 + G 95 -11 -4.59773 | gap 1, overlap 952008 ACGCCTTTTGCGGAG GGCGGGG-TCG TTT CGAGCCCTGCC TTTTTCCCGATGGGC Atu8141 951713 - 952294 + | hypothetical protein TERM 1175 952652 - 952613 - g 82 -12.8 -3.59979 | gap 1 CCGGTGGATTTCAAA TCCTGCCCGCCG-GGCGAG ACG CCCGCCGCGACGGACCAGA GGATCGGCACAGGTG TERM 1176 952860 - 952881 + G 79 -9.3 -4.27584 | GGCGTGCGCCGCCCA CCGGTGCCG TGAT CCGCGCCGG TTTTGAATTCGACGT Atu0964 952355 - 952993 + | hypothetical protein TERM 1177 953802 - 953813 + G 71 -5.8 -4.29325 | overlap 953794 GGGCTTTCCGCATCT TCCG GGAG CGGA TTTTGCCTATTCCTA Atu0965 952990 - 953874 + | hypothetical protein Atu0966 953871 - 954305 + | hypothetical protein TERM 1178 954342 - 954368 + G 74 -5.6 -4.57569 | overlap 954343 CGACAATCGTTTTTC AGGCGGCGGGCG CGG CGCTCGGCGGCA TTTTTGGCCCCGTGG TERM 1179 957740 - 957765 + G 77 -8.1 -4.35524 | ATTGCGGAAGCGGCG GGCATGGCGGG TGCA CCGGCCGGGCC TTTTGCCTTTGAGGG Atu0967 954323 - 958123 + | hypothetical protein Atu0968 958125 - 958364 + | hypothetical protein TERM 1180 958417 - 958380 - f 100 -13.3 -4.25104 | gap 1, opp_overlap 958376 958380 958381, overlap 958381 CGGGGCTCACGAAAA CGCCGCTCCCGCCA-CGC ATT GCGGCGGCGGGCCCGGCA TTCATTTGCCATTCA TERM 1181 958416 - 958381 - f 91 -14.6 -3.14848 | gap 1, opp_overlap 958380 958376 958381, overlap 958380 GGGGCTCACGAAAAC GCCGCTCCCGCCA-CGC ATT GCGGCGGCGGGCCCGGC ATTCATTTGCCATTC TERM 1182 958381 - 958416 + F 72 -12.4 -2.72211 | gap 1, opp_overlap 958381 958380, overlap 958380 958376 GGGGCTCACGAAAAC GCCGCTCCCGCC-ACGC ATT GCGGCGGCGGGCCCGGC ATTCATTTGCCATTC TERM 1183 958462 - 958482 + F 76 -3.1 -5.01732 | opp_overlap 958464, overlap 958463 958464 CATATTCGCTCACAC TAGGGTTCG AGA CGCACCCGG TTTTTTGCGGAAGTT Atu8142 958504 - 958758 + | hypothetical protein TERM 1184 959068 - 959047 - g 70 -5.1 -4.56775 | gap 1, overlap 959048 ACCGTCGTTGAAAAA TGG-CGTGCC GCC GGCAAGGCCA TGCCGGTCCTCATCC Atu0970 958852 - 959523 + | two component response regulator TERM 1185 960784 - 960749 - g 76 -10.4 -3.79668 | gap 1, opp_overlap 960757 960766, overlap 960771 AGCGAAGCGATGAAA CGCGGCCG-CCGGCT GGACGAG AGCCGGCCGGGCACG GGCCTCGGCCTGTCG Atu0971 959513 - 960913 + | two component sensor kinase TERM 1186 961056 - 961012 - f 86 -3.5 -5.29445 | opp_overlap 961021, overlap 961013 961048 GCGGAAGAACAAAAA TCTAGCGTGTTTTCACGGTTC GAA GAACAGCGAAAATGCTCTAGG TGCAATGCGATAGGA lipA 961121 - 961549 + | lipA protein TERM 1187 961935 - 961908 - g 79 -12.6 -3.53091 | ATGCCCGCGCCGAAA TCGGCCGCCGCC TGCT GGCCGCCGCCGA GGCGGAAGAGGTGAT cycH 961700 - 962872 + | cycH protein cycJ 962869 - 963366 + | cytochrome c-type biogenesis protein CcmE cycK 963363 - 965354 + | cytochrome c-type synthesis protein TERM 1188 965348 - 965378 + F 79 -12.6 -2.96274 | opp_overlap 965355, overlap 965343 965352 AATGCCGGAGGCGGC GGAATGAGTGTTGC CTC GCTACCCTCATTCC TGTGCTTGTCACAGG cycL 965351 - 965947 + | cycL protein dop 966101 - 967672 + | serine protease DO-like protease TERM 1189 967717 - 967683 - f 89 -13.4 -3.59262 | opp_overlap 967673 967671 967716, overlap 967684 GTTGATAGGCTGAAA TGCGATGCCGGCTTCC TTG GGAGGCCGGCGCCGCC CCAGACTATGTCTTG TERM 1190 967716 - 967684 - f 90 -16.9 -2.75343 | opp_overlap 967673 967671, overlap 967683 TTGATAGGCTGAAAT GCGATGCCGGCTTCC TTG GGAGGCCGGCGCCGC CCCAGACTATGTCTT ragA 967945 - 968703 + | two component response regulator TERM 1191 968935 - 968962 + G 76 -10.5 -3.71527 | gap 1, opp_overlap 968899 968898, overlap 968936 CTGCGGATGATGGAG CGC-CGCGCCCG CCAGC CGGGCGCGAGCC TTTACATCATTGCCG TERM 1192 968936 - 968961 + G 73 -14 -2.82595 | gap 1, opp_overlap 968899 968898, overlap 968935 TGCGGATGATGGAGC GC-CGCGCCCG CCAGC CGGGCGCGAGC CTTTACATCATTGCC TERM 1193 969510 - 969498 - g 73 -10.5 -3.61517 | ACGGCTGCGCAACAA GGCGG CCG CCGCC CTCGATGACAATGAC TERM 1194 970088 - 970099 + G 73 -4.4 -4.70879 | overlap 970080 CCTGCCCGGGACTGA CCAT TTCG ATGG TTTTTCCCATTTCGA ragB 968713 - 970122 + | two component sensor kinase Atu8143 971145 - 970285 - | hypothetical protein TERM 1195 970484 - 970454 - G 79 -12.4 -3.53811 | opp_overlap 970443 970477 TCGATGCGCTTGAAA CCGGCCTTCGCGTC ATA GCGGCGCAGGCCGG AGCGGGCGGATTGTG TERM 1196 971437 - 971451 + G 78 -2.8 -5.02074 | GCCCCTATACGCAGA CGGA ACTGAAA TCCG TTTTTTCGACGCTAA TERM 1197 973053 - 973065 + G 70 -4.7 -4.43844 | CTCTCGGGCCTGCCG GCGGG CAT CCAGC TTTTCTCGCTGCTCG glnE 971364 - 974330 + | glutamate-ammonia-ligase adenylyltransferase Atu0982 976886 - 974550 - | two component sensor kinase TERM 1198 976997 - 976981 - R 74 -6.7 -4.2349 | TGTCCAGAGGCAAAA GTTAAAA GAA TTTTAAC CCCTTGAACCGACTC Atu0983 977433 - 977113 - | hypothetical protein TERM 1199 977530 - 977497 - R 100 -20.5 -2.52543 | opp_overlap 977483, overlap 977518 ATGCGGCGCAATGCA TGACGCCGCCTTGAT GGAA ATCAAGACGGCGTCA TGGCGTGGATCAGAA pepN 980218 - 977570 - | aminopeptidase N TERM 1200 979033 - 979049 + g 75 -7.9 -4.2558 | overlap 979048 TGGTGGCAATCATGC GGGTGAC TTC GGCACCC TTTTCATAAACGGTC Atu0985 980681 - 981616 + | permease TERM 1201 981682 - 981700 + F 72 -11 -3.05022 | ACGTCAGAGTATTTG GCGAGGTT CAT AGCCTCGC TGTCTCTCTCAGCAA TERM 1202 981756 - 981733 - f 95 -11 -4.67038 | CGCGCAAAAGCAAAA GGCGCCTTCC CGAA GAAAGACGCC AGCGCGCAATCATAT Atu0986 981911 - 982099 + | hypothetical protein TERM 1203 982089 - 982109 + T 90 -6.1 -5.2189 | GCCAAATGCGCCGCT GTTATGCGT AAT GCGCATGGC TTTTTTCATAATTCA Atu0987 983040 - 982150 - | DNA polymerase Atu0988 984382 - 983084 - | HSP70 family molecular chaperone TERM 1204 983243 - 983200 - G 76 -9.6 -4.08064 | gap 1, opp_overlap 983234, overlap 983187 AACGGCGGGTGAAAA GCTCCCGCACCGCCGGCAC GAAGGAG GTACCGCCGGTG-AGGAAC ACCTTGTCGATCGCC TERM 1205 984438 - 984410 - H 73 -8.7 -3.88232 | overlap 984407 984411 GTGCCGATAGAAGAA CCCGCCCGGCC CTTGGGC GGCCCGGCGTG AAGATAAGGGATGCC TERM 1206 984464 - 984446 - H 83 -12.4 -3.65812 | overlap 984443 CCGGCGTGAAGATAA GGGATGCC CTT GGCACCCC GATGTCAGAGGAGGG TERM 1207 985763 - 985741 - g 70 -9.9 -3.55548 | opp_overlap 985741 985737 GAATACGGGGCGAAA CCGTTACGT GATCT ACGCAACGG TTCCTTGATCGGCCT Atu0989 984866 - 985771 + | hypothetical protein Atu0990 986581 - 985793 - | NAD/NADP dependent oxidoreductase TERM 1208 986730 - 986720 - H 70 -3.2 -4.72486 | overlap 986684 CAGAAACGCGAAAAA CCTC TAT AAGG CGGTTTCTGCTTTTG Atu0991 986763 - 987683 + | cation efflux system component Atu0992 988587 - 987718 - | permease Atu0993 988649 - 989275 + | TetR family transcriptional regulator TERM 1209 989372 - 989390 + F 82 -5.2 -5.10461 | opp_overlap 989376 TCATACTTGACGGCC GAAAGGGC GGA GCCTATTC TTTTTATTACGTGCA TERM 1210 989513 - 989540 + F 74 -2.7 -4.96848 | gap 2 TTTGCGAAGACAGGT GCCGATCGCTGCG GTGT CGC-G-GATGGGC TTTTTGTCTGGCGCA TERM 1211 990590 - 990620 + G 71 -8.9 -3.74747 | gap 1 CGAAGCTCACCTTCC CCGGCGGCGC-GCT GATC GGCTGTTCCGCCGG TTTCGTCAACGTTCC Atu0994 989626 - 991290 + | electrotransfer ubiquinone oxidoreductase TERM 1212 991363 - 991402 + F 70 -6.5 -4.15044 | gap 1, opp_overlap 991372, overlap 991372 ATGATTTTACGATAT TTGGACG-AATCCTCGGG AGAGG CCCGAGGATGATGTCGAA TTTGTTCGGACGGCG TERM 1213 991372 - 991392 + F 75 -12.6 -2.66034 | opp_overlap 991372, overlap 991363 CGATATTTGGACGAA TCCTCGGG AGAGG CCCGAGGA TGATGTCGAATTTGT TERM 1214 991392 - 991372 - f 83 -12.6 -3.16191 | opp_overlap 991372 991363 CGATATTTGGACGAA TCCTCGGG AGAGG CCCGAGGA TGATGTCGAATTTGT Atu0995 991737 - 992480 + | hypothetical protein TERM 1215 992511 - 992486 - T 91 -14 -3.08464 | gap 1, opp_overlap 992486 992485 992484 992479 TGATGATTGATGGAA CG-GCCGCGCG GTTTT CGCGCGGCACG GATATCTCTTTAAGG Atu0996 993580 - 992564 - | zinc-binding dehydrogenase Atu0997 993685 - 994074 + | hypothetical protein bacA 994197 - 995033 + | undecaprenyl pyrophosphate phosphatase TERM 1216 995100 - 995066 - T 95 -18.1 -2.71712 | gap 1, opp_overlap 995067 995072, overlap 995072 TTTTCGGTCGCAAAT GA-AAAAGGCCCGCTC TTTC GAGCGGGCCTTTTGTC GTTAGAGCAACGTGC TERM 1217 995067 - 995098 + T 91 -17.4 -2.71011 | opp_overlap 995066 995072, overlap 995072 TTTCGGTCGCAAATG AAAAAGGCCCGCTC TTTC GAGCGGGCCTTTTG TCGTTAGAGCAACGT TERM 1218 995093 - 995072 - T 100 -17.3 -4.98531 | opp_overlap 995072 995067, overlap 995066 GTCGCAAATGAAAAA GGCCCGCTC TTTC GAGCGGGCC TTTTGTCGTTAGAGC TERM 1219 995072 - 995093 + T 100 -17.3 -4.5442 | opp_overlap 995066 995072, overlap 995067 GTCGCAAATGAAAAA GGCCCGCTC TTTC GAGCGGGCC TTTTGTCGTTAGAGC mgtE 996475 - 995102 - | magnesium transport protein TERM 1220 996368 - 996388 + g 72 -11.9 -3.34222 | opp_overlap 996367 TGCGTCGGTATCAAG CGTGTTGAG GTG CTCGACACG TTCTGCAATGGTGGT TERM 1221 996507 - 996559 + r 89 -13.4 -3.53012 | gap 1, overlap 996508 GTCGATTCGCCGATT ACGGCGAACGCGGTGGTGAGCCGAC AGAG GTCGGATCAGTTCC-CGTTCGCCGC TTTCGGCAAAGGCAA TERM 1222 996508 - 996558 + r 90 -16.9 -2.71712 | gap 1, overlap 996507 TCGATTCGCCGATTA CGGCGAACGCGGTGGTGAGCCGAC AGAG GTCGGATCAGTTCC-CGTTCGCCG CTTTCGGCAAAGGCA TERM 1223 996754 - 996770 + r 74 -7.9 -4.08692 | opp_overlap 996755, overlap 996755 TTCGACCGCTGAAAA ACCGGCT GTC AGCCGGC TTTTGCGCGCCGTTC TERM 1224 996755 - 996769 + r 72 -11.4 -3.04894 | opp_overlap 996755, overlap 996754 TCGACCGCTGAAAAA CCGGCT GTC AGCCGG CTTTTGCGCGCCGTT TERM 1225 996769 - 996755 - R 95 -11.4 -4.58395 | opp_overlap 996755 996754 TCGACCGCTGAAAAA CCGGCT GTC AGCCGG CTTTTGCGCGCCGTT Atu1000 997847 - 996762 - | MFS permease TERM 1226 998071 - 998043 - H 100 -11.1 -5.36441 | gap 1 GGCCCACAGAAAAAA GGGCAAGACCGT ATGGGA ACGGTCT-GCCC TGACTGGAGATGCGC TERM 1227 998626 - 998579 - g 74 -12 -3.53811 | gap 1, opp_overlap 998618, overlap 998597 GCCAGGCCTTGGAAA CACTGGCGCATGGCGAAATCGCC AGC GTCGACATCGCCA-GCGTCAATG GCCGCCTTTTCGTGC TERM 1228 998994 - 998979 - g 75 -2.4 -4.90525 | CAAGCTCAAAGAAAA CGCTGC TGTG ACGGCG ATGACCGTAACGGAC Atu1001 998242 - 999150 + | hypothetical protein Atu1002 999240 - 1000670 + | putative aminotransferase Atu1003 1000736 - 1001206 + | hypothetical protein Atu1004 1001599 - 1001210 - | hypothetical protein Atu1005 1001826 - 1001596 - | hypothetical protein TERM 1229 1001871 - 1001834 - R 100 -12.3 -4.96848 | gap 1, overlap 1001835 1001863 1001869 1001870 GTGCGCATAGAAAAA TCCTTGGTGTATCGATTT TCG AAATC-ATACACCAAGGC AGGGTGCCGCGAAAT TERM 1230 1001870 - 1001835 - R 100 -15.8 -3.57627 | gap 1, overlap 1001834 1001863 1001869 TGCGCATAGAAAAAT CCTTGGTGTATCGATTT TCG AAATC-ATACACCAAGG CAGGGTGCCGCGAAA amn 1003398 - 1001893 - | AMP nucleosidase TERM 1231 1002497 - 1002521 + g 72 -12.2 -3.02144 | overlap 1002506 TGGTCGGTGATCGTC TTGGCGTTGG AAGGG CCAACGCCGA TATTGACGAGCGTAA TERM 1232 1003027 - 1002995 - G 76 -10.5 -3.84451 | opp_overlap 1003023, overlap 1002996 1002999 TCGCCGAAAGCGAAA TGCAGCGGAATGGGC GTA GCCGATTCCGCCACG GTGACCGGAACGCCG TERM 1233 1003026 - 1002996 - G 75 -14 -2.90349 | opp_overlap 1003023, overlap 1002995 1002999 CGCCGAAAGCGAAAT GCAGCGGAATGGGC GTA GCCGATTCCGCCAC GGTGACCGGAACGCC TERM 1234 1003023 - 1002999 - G 77 -14.3 -2.69528 | overlap 1002996 1002995 CGAAAGCGAAATGCA GCGGAATGGGC GTA GCCGATTCCGC CACGGTGACCGGAAC TERM 1235 1003822 - 1003804 - g 73 -13.2 -2.73681 | overlap 1003806 GAGCGAGGCGAAGGA CATGGCGA AGA TCGCCATG AGAAACGCGAAGATT Atu1007 1003657 - 1003908 + | hypothetical protein Atu1008 1004624 - 1004028 - | hypothetical protein Atu1009 1005095 - 1004757 - | hypothetical protein TERM 1236 1005631 - 1005617 - H 85 -4.9 -5.2189 | overlap 1005618 GGAAGGACGAAAAAA GCCGC AAAAG ACGGC GGGTCCGGACGATAG Atu8144 1005698 - 1005961 + | hypothetical protein TERM 1237 1006092 - 1006121 + T 100 -10 -4.87592 | gap 1, opp_overlap 1006092 CGCTGACACATCAAA CCGCGACCGGC AGGAACAAG GCCGG-CGCGG TTTTCTTATGTCTGG TERM 1238 1006121 - 1006092 - T 76 -10 -3.88498 | gap 1, opp_overlap 1006092 CGCTGACACATCAAA CCGCGACCGGC AGGAACAAG GCCGG-CGCGG TTTTCTTATGTCTGG TERM 1239 1006216 - 1006246 + T 100 -18.5 -3.18467 | overlap 1006207 GCGGCATTCTCCACC CCTCATTCCTGTG ACGAG CACAGGAATGAGG TTGGGTTGGGAATTT hisC 1007372 - 1006260 - | histidinol-phosphate aminotransferase TERM 1240 1007453 - 1007429 - R 91 -9.9 -4.62302 | opp_overlap 1007431 1007449, overlap 1007431 CAATAGGTGCAAAAA TACCGGACGCA AGG CGCGCCCGGTT ATCCAATGACTGTTT TERM 1241 1007451 - 1007431 - R 90 -12.5 -3.91908 | opp_overlap 1007431 1007449, overlap 1007429 ATAGGTGCAAAAATA CCGGACGCA AGG CGCGCCCGG TTATCCAATGACTGT TERM 1242 1007431 - 1007451 + r 70 -9.6 -3.33671 | opp_overlap 1007431 1007429, overlap 1007449 ATAGGTGCAAAAATA CCGGACGC AAGGC GCGCCCGG TTATCCAATGACTGT Atu8145 1007887 - 1007540 - | hypothetical protein Atu1013 1008216 - 1009433 + | ferredoxin reductase Atu1014 1009441 - 1010241 + | aldolase TERM 1243 1010454 - 1010490 + T 88 -13.7 -3.32997 | opp_overlap 1010459, overlap 1010450 GCTTTATCCCAATAG GTAAAGGCAAGGCAGGT GAG ACCCGCCTTGCCTGAAC TTCAATTTATACGGC TERM 1244 1010485 - 1010459 - T 100 -18.8 -3.76641 | opp_overlap 1010454 1010450 ATCCCAATAGGTAAA GGCAAGGCAGGT GAG ACCCGCCTTGCC TGAACTTCAATTTAT Atu8146 1010849 - 1010508 - | hypothetical protein Atu1018 1011390 - 1011698 + | hypothetical protein TERM 1245 1011712 - 1011735 + T 72 -12.4 -2.79831 | opp_overlap 1011707, overlap 1011701 GAGCCCTAAACCGGC GCCGGACCTG TTCT CAAGTCCGGC TATGGTCGCGGTTCG Atu1019 1012262 - 1012047 - | hypothetical protein TERM 1246 1012668 - 1012682 + G 78 -2.1 -5.06414 | gap 1, overlap 1012668 1012669 CTGACAACGGCTCGT C-CTCG TCTT CGAGCG TTTTTGTTGACCAGG Atu1020 1012325 - 1013434 + | outer membrane protein TERM 1247 1013483 - 1013462 - f 72 -11.5 -3.07816 | opp_overlap 1013463 TCGTCAGTGATGGAA GCCCCGGCA GAAA TGCCGGGGT TTTTCTATTTCTGAC TERM 1248 1013463 - 1013482 + F 100 -15 -5.24799 | opp_overlap 1013462 CGTCAGTGATGGAAG CCCCGGCA GAAA TGCCGGGG TTTTTCTATTTCTGA TERM 1249 1013743 - 1013729 - f 70 -2.9 -4.71584 | GAAACAAATAAGAAA TTAAC CTTTT GTTAA TGAATGTGCTCAGCC TERM 1250 1013807 - 1013793 - f 76 -2.8 -4.99435 | opp_overlap 1013793 1013794 1013798, overlap 1013794 1013798 CGCAACAATGAAAAA CTAAGG ACA CCTTAC TGTCTTCCTTTTGTC Atu1021 1013942 - 1015039 + | outer membrane protein TERM 1251 1015059 - 1015095 + T 95 -15.4 -3.53012 | gap 1, opp_overlap 1015068, overlap 1015068 ATCTGACGCAGTCAG TGAAGGAAACCCCGGCA GAGA TGCCGGGGTTTT-TTCA TTTGGGGGCCCAGAG TERM 1252 1015087 - 1015068 - T 100 -15 -3.93556 | opp_overlap 1015068 1015059 AGTCAGTGAAGGAAA CCCCGGCA GAGA TGCCGGGG TTTTTTCATTTGGGG TERM 1253 1015068 - 1015087 + T 100 -15 -5.37593 | opp_overlap 1015068, overlap 1015059 AGTCAGTGAAGGAAA CCCCGGCA GAGA TGCCGGGG TTTTTTCATTTGGGG TERM 1254 1015165 - 1015148 - T 100 -12.7 -5.63517 | TGTTGAAACAAAAAA GCACGGG CTAG CCCGTGC CTGAATGCTCTGATG Atu1022 1017245 - 1015197 - | soluble lytic transglycosylase TERM 1255 1017435 - 1017448 + G 70 -3.8 -4.62336 | overlap 1017439 TTTATTCACTGGCCC GCGA GCGACG TCGC TTTTTGGCGTCAGCT TERM 1256 1017439 - 1017462 + G 70 -3.1 -4.62069 | gap 1, overlap 1017435 TTCACTGGCCCGCGA GC-GACGTCG CTTTT TGGCGTCAGC TTTTTGCGCTCGCCG Atu1023 1017268 - 1017564 + | hypothetical protein dapA 1017629 - 1018513 + | dihydrodipicolinate synthase TERM 1257 1018536 - 1018579 + F 81 -3.8 -5.26119 | gap 2, opp_overlap 1018536 CTGAAAAGCTTGAAA GGCGCGCCATGGACCGCTTC ATAACA GAAGCCCTCCC-G-CGCGCC TTTTCTTTTTGCGGC smpB 1018677 - 1019159 + | SsrA-binding protein Atu1026 1019224 - 1019406 + | hypothetical protein mcpV 1020963 - 1019464 - | methyl-accepting chemotaxis protein TERM 1258 1020520 - 1020550 + g 89 -11.1 -4.21812 | GGCGGCCTTGATGGT GGCGGAGAGGGCG TCCTT CACCTTCTTCGCC TTCTTTTCCATGAAA TERM 1259 1021123 - 1021146 + r 91 -12.4 -4.11216 | opp_overlap 1021123 CGGCACAAACAAAAA CGCGCCCGTT TTTC AACGGACGCG TTTTAAAAGTCAGCG TERM 1260 1021146 - 1021123 - R 100 -14.6 -5.38054 | opp_overlap 1021123 CGGCACAAACAAAAA CGCGCCCGTT TTTC AACGGACGCG TTTTAAAAGTCAGCG Atu1028 1021746 - 1021177 - | hypothetical protein TERM 1261 1021773 - 1021785 + H 77 -4.8 -4.88918 | opp_overlap 1021773 CCTTTTTTTGGAAAG GCCA TTATC TGGC TTTTATTTCCGGTCG rnpO 1022139 - 1022528 + | DNA-directed RNA polymerase subunit omega TERM 1262 1022547 - 1022574 + F 76 -12.8 -2.74012 | overlap 1022555 GGTTTTATGATGCCT TTGGCAGGCGGT GGTT ACCGTCTGTCAA TAGTTGCCGTCATAA TERM 1263 1022614 - 1022639 + F 100 -14.7 -4.96501 | TATTGATGCAGCATT GTGCGCCGACC CCAA GGTTGGCGCGC TTTCTTTTTGTGGAA Atu1030 1022661 - 1024895 + | GTP pyrophosphohydrolase/synthetase TERM 1264 1024883 - 1024899 + F 77 -4.4 -4.90906 | GTCGACTGTCGCGCG TGCCTT CGATT GAGGCA TTTTTGATCTTCTGC TERM 1265 1024926 - 1024960 + F 100 -13.6 -4.41353 | opp_overlap 1024921 1024926 CTGCAAATACCAAAA GGCCGTTGTTATGCGT CGA GTGCATGGCAGCGGCC TTTTCCTGTCTCTGG TERM 1266 1024960 - 1024926 - f 70 -5.6 -4.49756 | opp_overlap 1024926, overlap 1024921 CTGCAAATACCAAAA GGCCGTTGTTATGC GTCGAGT GCATGGCAGCGGCC TTTTCCTGTCTCTGG Atu1031 1025053 - 1025238 + | hypothetical protein TERM 1267 1025344 - 1025333 - f 75 -5.8 -4.52873 | overlap 1025330 1025334 1025335 CTGCCAGAAAAACAA TGCG GATG CGCA CCAACAAGCGCGCAT TERM 1268 1025362 - 1025335 - f 72 -12 -2.57877 | overlap 1025333 1025334 1025330 1025352 GCCAGAAAAACAATG CGGATGCGCACC AACA AGCGCGCATCCA TGACGGGAGCATCCT Atu1032 1025506 - 1026084 + | hypothetical protein TERM 1269 1026239 - 1026291 + G 74 -7 -4.3739 | opp_overlap 1026252 1026253 TTACGCCAAGCGTTT CGCCGCCAAGGAAG-CCTGTTCCAAG GCG CTTGGAACGGGGCTTGCGAA-CGGCG TTTTCTGGAAGGATA acpS 1026081 - 1026485 + | 4'-phosphopantetheinyl transferase sipf 1026692 - 1027438 + | type I signal peptidase TERM 1270 1027530 - 1027512 - g 100 -13.8 -4.45664 | TGAATTCAAGGAAAA GGCCCGGC TCG ACCGGGCC TTGACCCATGCCAGC TERM 1271 1027554 - 1027600 + G 72 -11.7 -3.41125 | opp_overlap 1027569 1027572, overlap 1027570 TGCCAGCGCCCGTTC CGCCGCCG-CCGGAAATTACGAG CGG CTCG-AATTTCTGGGCGACCGCG TTCTCGGTCTCTGCG rnc 1027435 - 1028154 + | ribonuclease III Atu1036 1028238 - 1029179 + | GTP-binding protein Era TERM 1272 1029279 - 1029306 + F 93 -4.8 -5.55664 | GAACACGTTCGGGCC GGTTGTTCCAAA ACAA TTGGGCGCAACC TTTTTTTGATGATGG fixK 1029328 - 1030080 + | nitrogen fixation regulatory protein Atu1038 1030216 - 1030593 + | two component response regulator TERM 1273 1031360 - 1031330 - g 100 -16.9 -4.4078 | gap 1, opp_overlap 1031330 1031332 CGGCCTCAATGAAAA CGCCGCCCGCGACG GTTT CGT-GCAGGCGGCG CTGAAGGCGCTGGAG recO 1030650 - 1031414 + | DNA repair protein RecO Atu1040 1032689 - 1031469 - | MFS permease TERM 1274 1032214 - 1032200 - G 73 -10 -3.5944 | ATCCATAGGCGGAAA TCAGCC CTT GGCTGA TAGGTGCAAACAGGA TERM 1275 1032965 - 1032981 + G 79 -8 -4.45083 | CGCGCCATGTTGCCG GACCTG AAAGG CAGGTC TTTTCTCGATCTCGG Atu1041 1032848 - 1033582 + | methyltransferase Atu1042 1034634 - 1033792 - | hypothetical protein Atu1043 1035290 - 1034646 - | hypothetical protein TERM 1276 1034876 - 1034865 - G 70 -3.6 -4.66537 | overlap 1034866 1034868 CCCGGCAATATAAAA GCAG CGGG CCGC CCCCACCATGCCGAT Atu1044 1037935 - 1035287 - | hypothetical protein TERM 1277 1035919 - 1035909 - G 74 -3.2 -4.86001 | AGCACGCCAGAAAAA CCGA TGG TCAG CAGCGTGTAGATCGA TERM 1278 1037640 - 1037626 - G 71 -5.6 -4.30844 | ATTTGACGAGGAAAA TGCCGC CAA GCGCCA GCGCCAGACCACCCG Atu1045 1039750 - 1038191 - | hypothetical protein TERM 1279 1039939 - 1039971 + H 76 -5 -4.7033 | opp_overlap 1039938 1039941, overlap 1039940 1039941 CTATGCATATAAAAT AAGCATACAAAATA ACGGC TATTTTGTATGCAA TTTTATCTTGCCTTG TERM 1280 1039969 - 1039941 - H 100 -12.7 -4.38744 | opp_overlap 1039940 1039939 1039941, overlap 1039938 ATGCATATAAAATAA GCATACAAAATAA CGG CTATTTTGTATGC AATTTTATCTTGCCT TERM 1281 1039941 - 1039969 + H 72 -12 -2.63584 | opp_overlap 1039941 1039938, overlap 1039940 1039939 ATGCATATAAAATAA GCATACAAAATA ACGGC TATTTTGTATGC AATTTTATCTTGCCT TERM 1282 1040084 - 1040107 + G 89 -11 -4.18018 | gap 1, opp_overlap 1040073, overlap 1040096 AGAACGTTGGCGATT GCC-GCGATCG GTG CGGTCGCTGGC TTTTCGCTGCCGGCG Atu1046 1040042 - 1041085 + | ABC transporter, substrate binding protein Atu1047 1041369 - 1042124 + | ABC transporter, nucleotide binding/ATPase protein Atu1048 1042121 - 1042939 + | ABC transporter, membrane spanning protein TERM 1283 1042985 - 1042964 - T 82 -5.2 -5.0133 | gap 1, opp_overlap 1042979, overlap 1042944 1042966 CACGGGCGCAAAAAA CAC-CCATG CTGAC CATGGGGTG CAAAATTAATGCGCC TERM 1284 1042982 - 1042966 - T 77 -8 -4.13561 | opp_overlap 1042979, overlap 1042944 1042964 CGGGCGCAAAAAACA CCCATG CTGAC CATGGG GTGCAAAATTAATGC Atu1049 1043674 - 1042991 - | hypothetical protein TERM 1285 1043159 - 1043184 + g 76 -5.3 -4.65078 | gap 1, opp_overlap 1043159 GCTAAACTGGATGAA CTGCGGTGCGGC CTC GTCGC-CGGCGG TTTTCTTGAAGATGT TERM 1286 1043817 - 1043794 - R 100 -14.6 -4.72272 | TCGGGTCATGAAAAA CGCGATGGCT GTTC AGCCACCGCG CTTAAAATATGCGGG TERM 1287 1043877 - 1043908 + r 70 -5.1 -4.4009 | gap 1 TGTGCGTTTACCTCG GCCTTGC-GTTCGT CAAAA GCGAGCCGCATGGC TTTTGTCACGTCGCG Atu1050 1044673 - 1043852 - | hypothetical protein Atu1051 1045269 - 1044751 - | hypothetical protein Atu1052 1045853 - 1045266 - | hypothetical protein TERM 1288 1045476 - 1045458 - G 70 -4.4 -4.56597 | opp_overlap 1045445 1045461 GGTCGCTTCGAAAAA GGCGGCCA CTG TGTCGGCC TTCTTGATGCGATCC TERM 1289 1045540 - 1045554 + g 84 -11.4 -4.11371 | opp_overlap 1045528 AAACGCAGATGCACG GCGGCT TCC AGCCGC TTTTCCACGGTCTTG gcvT 1046740 - 1045892 - | glycine cleavage system T protein, aminomethyltransferase Atu1054 1047630 - 1046863 - | hypothetical protein TERM 1290 1047463 - 1047475 + g 71 -6.2 -4.42653 | overlap 1047440 1047462 AGGCTGTGCCTGCTG CGGC TGTTC GCCG TTTTGTGCCTGCGGT Atu1055 1047902 - 1047645 - | hypothetical protein Atu1056 1048445 - 1048008 - | hypothetical protein nudF 1048960 - 1048544 - | ADP-ribose pyrophosphatase TERM 1291 1049120 - 1049144 + G 75 -2.7 -4.93365 | overlap 1049128 TTATCTATGTTCTGG CGGCCGTTG CCGAAAT CGCCGGCTG TTTTTCCTTCTGGGC Atu1058 1049092 - 1049415 + | hypothetical protein Atu1059 1049426 - 1050187 + | hypothetical protein Atu1060 1051526 - 1050234 - | two component response regulator TERM 1292 1050644 - 1050681 + g 77 -14.9 -2.78547 | opp_overlap 1050640 1050641, overlap 1050647 1050650 TCTTCTTGAAATGGT CAATGTCGAGAATGGCG ACTG CGCCGCTCTCGTCATTG TCATTGATGACATCC TERM 1293 1050647 - 1050678 + g 70 -10.8 -3.54029 | opp_overlap 1050640 1050641, overlap 1050644 1050650 TCTTGAAATGGTCAA TGTCGAGAATGGCG ACTG CGCCGCTCTCGTCA TTGTCATTGATGACA Atu1061 1051822 - 1051673 - | hypothetical protein TERM 1294 1051831 - 1051811 - G 100 -14 -5.47159 | opp_overlap 1051825 1051826, overlap 1051825 1051826 TGCAAGAAACAAAAA CGGCGCCT GCAAA AGGCGCCG CGCGATTGTTGATCT TERM 1295 1051916 - 1051905 - R 74 -3 -4.95155 | CTGATATCAGAAAAA TGAA TGTT TTCA GGCGGTTTTGGCGGT TERM 1296 1052218 - 1052204 - R 76 -2.8 -5.00616 | TTGTCTGGCAAAAAA TAAACC TGC GGTTTT AAATGCCGCGATCGA pssA 1053083 - 1052217 - | phosphatidylserine synthase psd 1053805 - 1053107 - | phosphatidylserine decarboxylase TERM 1297 1053939 - 1053910 - R 76 -10.5 -3.70902 | overlap 1053911 CTGGTTACAGCCAAA CGTCCCGCCCGGC AATG GCCCGGCGGGTCT CCCACCCCGGTTCCC TERM 1298 1053938 - 1053911 - R 83 -14 -2.82327 | overlap 1053910 TGGTTACAGCCAAAC GTCCCGCCCGGC AATG GCCCGGCGGGTC TCCCACCCCGGTTCC Atu1064 1055867 - 1053981 - | ABC transporter, nucleotide binding/ATPase protein TERM 1299 1055930 - 1055902 - R 72 -12.4 -2.64794 | opp_overlap 1055892 CGGAAGCCGACAGCA GGACGGCGGCTT TGGTC AAGCCGCCGCGC GTGTCACAGATAGGA Atu8147 1058003 - 1055979 - | hypothetical protein TERM 1300 1056178 - 1056152 - G 79 -12.2 -3.5394 | opp_overlap 1056159 AAACGCGCCGGGAAA TCTGCCACAGCG TGT CGCCGCGGCGGA TGATGACGCTGTTCT Atu1066 1058145 - 1058780 + | hypothetical protein TERM 1301 1058865 - 1058895 + F 86 -9.9 -4.27861 | overlap 1058874 CGATGGAGGCTACCA TTGTTAACG-GCCGC CCG GCGGCTCGTT-ACAA TTTTAAGTGTATATT TERM 1302 1059059 - 1059080 + G 75 -2.9 -4.89477 | gap 1, opp_overlap 1059028 TGATTGCTTTTGTGA TGCGGCTCAG GAG CCGGGC-GCA TTTTATTATTCAGAG TERM 1303 1060736 - 1060760 + G 89 -9.9 -4.48987 | overlap 1060702 TCATCGCGCAGACGG CGGGGCTTCTC GGT GTGAAGCCGCG TTTTGGTTATGACGC pbpB 1059043 - 1060803 + | penicillin-binding protein Atu1068 1061748 - 1060840 - | hypothetical protein pip 1062931 - 1061975 - | proline iminopeptidase Atu1070 1063393 - 1062935 - | hypothetical protein Atu1071 1063866 - 1063393 - | hypothetical protein Atu1072 1064231 - 1063863 - | hypothetical protein cysS 1065875 - 1064490 - | cysteinyl-tRNA synthetase TERM 1304 1065425 - 1065452 + g 76 -13.4 -3.06501 | gap 1, opp_overlap 1065423 1065422, overlap 1065405 TGTCGAACAGAACCT CGCCGCC-CGCCT TAT AGGCGTGGCCGCG TTCGATGAGCCTCTC Atu1074 1066828 - 1066088 - | NAD/NADP dependent oxidoreductase TERM 1305 1066956 - 1066933 - R 100 -12.4 -5.52096 | gap 1, opp_overlap 1066933 AAAGGCAAGAAAAAA GCGGCC-CCGG AAG CCGATGGCCGC TTTGTCGTTGTTAAA TERM 1306 1066933 - 1066956 + r 86 -10.2 -4.14257 | gap 1, opp_overlap 1066933 AAAGGCAAGAAAAAA GCGGCC-CCGG AAG CCGATGGCCGC TTTGTCGTTGTTAAA purF 1068482 - 1066974 - | amidophosphoribosyltransferase TERM 1307 1068415 - 1068395 - G 79 -9 -4.1585 | opp_overlap 1068383 CGAGAATGCCGAAAA CGCCGCAT TCTTC ATGCAGCG TATCGCCATCGATCT TERM 1308 1068615 - 1068583 - R 100 -14.2 -3.98661 | opp_overlap 1068582 1068577 1068573, overlap 1068585 1068586 GATATTTAGCACAAA TAGCGCGCCTTGCA TGCAT TGCAAGGCGCGACA CTGTGTCAATTATTC TERM 1309 1068613 - 1068585 - R 95 -14.6 -3.5812 | opp_overlap 1068582 1068577 1068573, overlap 1068583 1068586 TATTTAGCACAAATA GCGCGCCTTGCA TGCAT TGCAAGGCGCGA CACTGTGTCAATTAT TERM 1310 1068612 - 1068586 - R 95 -18.1 -2.7439 | opp_overlap 1068582 1068577 1068573, overlap 1068585 1068583 ATTTAGCACAAATAG CGCGCCTTGCA TGCAT TGCAAGGCGCG ACACTGTGTCAATTA cvpA 1069208 - 1068621 - | colicin V production protein radA 1070704 - 1069298 - | DNA repair protein RadA TERM 1311 1069495 - 1069515 + g 70 -12.5 -2.90615 | overlap 1069492 CCGTATGCGCCACTG GCCTGACGG CAC CCGACAGGC TGATTTCGCCGAAAT Atu1078 1070875 - 1070711 - | hypothetical protein Atu1079 1071287 - 1071018 - | hypothetical protein alr 1072528 - 1071353 - | alanine racemase Atu1081 1072651 - 1073472 + | AraC family transcriptional regulator TERM 1312 1073950 - 1073963 + G 70 -3.8 -4.58395 | GGGTCATTGCCGGCA GGCT CACGGC AGCC TTTTTCGCCGGTGCC Atu1082 1073571 - 1074275 + | branched-chain amino acid permease Atu1083 1074272 - 1074574 + | hypothetical protein TERM 1313 1074617 - 1074600 - T 70 -6.9 -4.09739 | opp_overlap 1074583 1074600, overlap 1074582 CCAACGTCCTGAAAA GACTCCG GACT CGGCGTC TGTAATGCGAAGCGG TERM 1314 1074632 - 1074666 + T 88 -11.4 -4.20084 | overlap 1074634 CTGTAATGCGAAGCG GGCAGCGGGGGTGAAA ATA TGTCACCCTCGCTGTG TTTTGGATCAGTGCT TERM 1315 1074634 - 1074664 + T 100 -16.2 -3.6993 | overlap 1074632 GTAATGCGAAGCGGG CAGCGGGGGTGAAA ATA TGTCACCCTCGCTG TGTTTTGGATCAGTG dnaC 1076170 - 1074674 - | replicative DNA helicase TERM 1316 1075633 - 1075602 - G 71 -8.6 -4.08216 | CCATCGCGCTCAAAA GCGGCGCCCGCCAT GTCG ATTGCCAGCGCCAC AGCATCGTTGAACGA TERM 1317 1076533 - 1076551 + G 73 -4.4 -4.65895 | opp_overlap 1076506, overlap 1076535 TGAAGTCTCCGCTTT CACCCGCA AAC TGCGCGCG TTTTTCGATGCGCGG TERM 1318 1076589 - 1076606 + G 73 -4.7 -4.64766 | overlap 1076590 1076591 AAAGCGGCCTGACGC TTGCCCG TGCG CGGGCGC TTTTTGCGCTCTCAC slyA 1076483 - 1076938 + | MarR family transcriptional regulator TERM 1319 1077083 - 1077111 + G 72 -11.6 -3.35996 | overlap 1077070 TGGAAGCCGCCATTC CCGCCGCGCCAC AGCCG GTGGAGCGGCCG TTATGGCTCCGGCTC TERM 1320 1078585 - 1078603 + G 71 -6.6 -4.2679 | ATCTCCGTCGTTTCC GCGCTGGC GCT GGCAGTGC TTTTAATCCACCTTG Atu1086 1077064 - 1078686 + | MFS permease TERM 1321 1078751 - 1078800 + G 93 -15 -3.83205 | gap 2 ATCCTCGTGCTGCTC GGCGGCA-TCGCC-GGCGTTGCGC TGGT GCTTTACGCCTGGCGGCTGCCGCC TTTCCTGTCCACCGT Atu1087 1078706 - 1079773 + | secretion protein TERM 1322 1080016 - 1079995 - T 100 -15.9 -5.27335 | opp_overlap 1079995 GCTTGCAAACAAAAA CCCCGGATG TCGC CATCCGGGG TTTTCCTATGACCAC TERM 1323 1079995 - 1080016 + T 100 -15.9 -4.34402 | opp_overlap 1079995 GCTTGCAAACAAAAA CCCCGGATG TCGC CATCCGGGG TTTTCCTATGACCAC rplI 1080619 - 1080044 - | 50S ribosomal protein L9 Atu1089 1081608 - 1080634 - | hypothetical protein TERM 1324 1081533 - 1081515 - G 76 -6.6 -4.54253 | AAAGCAGGAAAGAAA GCGACGAC TGT GCCGTTGC GCCAAGCGTTAAAAA TERM 1325 1081567 - 1081549 - G 70 -3.8 -4.62471 | gap 1, overlap 1081551 GCCAAGCGTTAAAAA CGC-GGC GCATAT GCCGGCG AGAACGCCGGAGATC TERM 1326 1081663 - 1081673 + r 75 -6.8 -4.51378 | CCTGAGAGCCTCATC CCCA ACA TGGG TTTTATGGTATCGAT TERM 1327 1081718 - 1081745 + r 100 -17 -3.23899 | opp_overlap 1081718, overlap 1081713 GAAGGATTTGCAAAA GCGAGGCCGCGT CGAA ACGCAGCCTCGC TTCAATTCATTACGC TERM 1328 1081745 - 1081718 - R 100 -19.2 -4.12902 | opp_overlap 1081713 1081718 GAAGGATTTGCAAAA GCGAGGCCGCGT CGAA ACGCAGCCTCGC TTCAATTCATTACGC rpsR 1082003 - 1081755 - | 30S ribosomal protein S18 rpsF 1082478 - 1082017 - | 30S ribosomal protein S6 TERM 1329 1082304 - 1082317 + g 78 -4.5 -4.7373 | CCATGAGAGCGTAGT GAGCC TTGC GGTTC TTTTTGATGCGGTAG Atu1092 1082486 - 1082764 + | hypothetical protein Atu1093 1083813 - 1082770 - | aldo/keto reductase TERM 1330 1083044 - 1083067 + g 73 -10.2 -3.57239 | gap 1, overlap 1083039 1083054 1083054 TTGTTGATGGTGCCG CGCGAGCCCGC CGG GCGGGCGC-CG TTCTGGTATTTGCCT TERM 1331 1083929 - 1083942 + H 70 -9.5 -3.33261 | opp_overlap 1083913 1083927 GGGTTTGTAAAACCC CGGGC AATG GCCCG TTATAGGGCTTCAAG fabD 1083983 - 1084978 + | malonyl-CoA:acyl carrier protein transacylase fabG 1085057 - 1085794 + | 3-ketoacyl-(acyl-carrier-protein) reductase NodG acpP 1086146 - 1086382 + | acyl carrier protein TERM 1332 1086418 - 1086443 + F 91 -11.2 -4.36914 | gap 1, overlap 1086419 GACATATCTTCCCGT C-TTGGCCCGG CTTGT CCGGGCCAATG TTTTATAGGCAGCCG TERM 1333 1086419 - 1086441 + F 100 -14.9 -3.79419 | overlap 1086418 ACATATCTTCCCGTC TTGGCCCGG CTTGT CCGGGCCAA TGTTTTATAGGCAGC TERM 1334 1086499 - 1086530 + F 76 -12.2 -3.14881 | CCCGATGTCGCAATG GGTCACGGGCCGCG ACGG CGCTGCCTGTAACC TTCATACAAAGATTA TERM 1335 1086973 - 1086932 - g 77 -11.6 -3.57263 | gap 1, opp_overlap 1086948, overlap 1086919 ACTGGCATCCGGAAA CGGACGACGACCAGATCGC TACCG GCGTTCTGATCGGC-TCCG GCATTGGCGGTCTGG fabF 1086634 - 1087896 + | 3-oxoacyl-(acyl carrier protein) synthase II TERM 1336 1087922 - 1087897 - f 77 -11.1 -3.54029 | gap 1, overlap 1087863 1087891 CGTTACGAAGCATAA TC-GCGGCGGCG ACA CGCCGTCGCTGA AGGTGTCCCGCGCCG Atu1098 1087925 - 1088233 + | hypothetical protein TERM 1337 1088239 - 1088227 - f 73 -5.5 -4.57569 | TTACCTGCGCAAAAA GCGCT GAC AACGC CGAACTGAAAAGGAC TERM 1338 1088984 - 1088938 - g 72 -13.9 -2.64099 | gap 2, overlap 1088937 GCGGCGCAGGACAAG CTGATCGACATGGTCTGGGAGCG GCG CGATCCC-GACC-TGCCGATCAA GACCATCGAGGAATT TERM 1339 1089306 - 1089331 + G 89 -16.1 -3.34398 | overlap 1089304 GGATGACCTTTATTT CGTGGCCGACG GCAC CGGCGGCCACG TCTTTGCCAAGACGC Atu1099 1088260 - 1089480 + | hypothetical protein TERM 1340 1089491 - 1089515 + F 100 -15.8 -4.14739 | opp_overlap 1089485 ACTGATAATCTCGAC CGGGCCTTGT CATCC ACAAGGCCCG TTTTGCGCTGCATGA Atu1100 1089547 - 1090434 + | hypothetical protein gmk 1090440 - 1091102 + | guanylate kinase Atu1102 1091727 - 1091104 - | hypothetical protein ksgA 1092629 - 1091799 - | dimethyladenosine transferase pdxA 1093651 - 1092629 - | 4-hydroxythreonine-4-phosphate dehydrogenase Atu1105 1094625 - 1093678 - | hypothetical protein TERM 1341 1094687 - 1094710 + r 80 -8.9 -4.09685 | gap 1, overlap 1094678 1094687 TCTGTTCCGCCCGAA G-CGGGGAGT ATTCA ACTCCCCGGC TTTTCAGACCTGCAC TERM 1342 1094886 - 1094913 + r 85 -12.7 -3.61356 | opp_overlap 1094886 AGCAAATGGCAAAAA GGCAGGCCACG ATGCTG CGTGACCTGCC TTTAAACTCAGTAGT TERM 1343 1094913 - 1094886 - R 100 -14.9 -4.71482 | opp_overlap 1094886 AGCAAATGGCAAAAA GGCAGGCCACG ATGCTG CGTGACCTGCC TTTAAACTCAGTAGT ostA 1097302 - 1094921 - | organic solvent tolerance protein Atu1107 1098390 - 1097302 - | hypothetical protein TERM 1344 1097659 - 1097642 - G 74 -6.3 -4.4784 | gap 1, overlap 1097638 GAAAGGTCAAAGAAA GCA-ACGG TTT CCGTCTGC GTCATACGCTCCTGG Atu1108 1099556 - 1098387 - | hypothetical protein TERM 1345 1098932 - 1098970 + g 76 -10.1 -3.77196 | CGTCGGGCGTCTTCT GCTGCACTTCGCCGTCC CGCAT GGTCAGCGACGTGCCGC TTTCATCGATCATGC TERM 1346 1100324 - 1100303 - g 74 -6.6 -4.30844 | overlap 1100317 ATCCGACGATGAAAA GACACCGA AGAAAG TCGATGTC ACCATCGTAACCGCC pepA 1099854 - 1101347 + | leucyl aminopeptidase holC 1101373 - 1101822 + | DNA polymerase III subunit chi TERM 1347 1101835 - 1101816 - f 95 -7 -5.40072 | TCGCTGGCAAAAAAA GGCCTGAC TGCC GCCCGGCC ATATTCAGACCAGCC TERM 1348 1103003 - 1102970 - g 93 -8 -5.06451 | overlap 1102971 1102973 TATCAGGCCAAAAAA TCAGGGCGCGACCG CTTTGT CAGCCGCGCCCTCT GAGGCTTGTATGTCT TERM 1349 1103002 - 1102971 - g 77 -11.5 -3.63148 | overlap 1102970 1102973 ATCAGGCCAAAAAAT CAGGGCGCGACCG CTTTGT CAGCCGCGCCCTC TGAGGCTTGTATGTC TERM 1350 1103000 - 1102973 - g 81 -14.1 -3.38726 | overlap 1102971 1102970 CAGGCCAAAAAATCA GGGCGCGACCG CTTTGT CAGCCGCGCCC TCTGAGGCTTGTATG Atu1112 1101977 - 1103005 + | hypothetical protein Atu1113 1103962 - 1103036 - | dehydrogenase TERM 1351 1103174 - 1103191 + g 74 -3.3 -4.73388 | overlap 1103176 1103180 AAGGGCCGGATATTC CCGTTCC GGCT GGGACAG TTTTTCCTCGCCGTT TERM 1352 1103295 - 1103322 + g 78 -2.6 -5.03314 | TGCTTGCCGGTCTGG CGCCAGTCGA ATTCGGCA TGGACGGGCG TTTTTTCAACGTCGG TERM 1353 1103846 - 1103833 - G 77 -8.1 -4.29106 | overlap 1103835 TGCCATAGGAAGAAA CACCG TCCA CGGTG CCGTGGCGGCTGGCG TERM 1354 1103855 - 1103835 - G 71 -9 -3.7456 | gap 1, overlap 1103833 CCATAGGAAGAAACA CCGTCCACG GTGC CGTGG-CGG CTGGCGGTGCAGATC TERM 1355 1104342 - 1104361 + H 80 -5 -4.8622 | gap 1, overlap 1104344 TGGTAATCTTATACT TTCC-CTGC GTA GCAGTGGGA TTTTTGATTGCCAGA TERM 1356 1105084 - 1105068 - g 80 -3.5 -5.03145 | GAAGCGGTGAAAAAA CGCGAGG TTG CGGCGCG GACGGATTCTCTGAC Atu1114 1104423 - 1106360 + | GGDEF family protein TERM 1357 1107372 - 1107348 - g 73 -10 -3.58522 | gap 1 ATCATGATGGCGAAA CAGCGG-ACGC GCAT GCGTGCCGCCG AAAGACGGGCCGAAC Atu1115 1106445 - 1108106 + | two component sensor kinase nwsB 1108103 - 1108711 + | two component response regulator TERM 1358 1108773 - 1108795 + F 77 -7.7 -4.30576 | opp_overlap 1108791 GTCCGCCTAATCTGG GGTCCTCAT CAAAC AAGAGGACC TTTTCATGATCCGCA Atu1117 1108801 - 1109283 + | hypothetical protein TERM 1359 1109324 - 1109297 - T 86 -14.9 -2.89039 | gap 1, overlap 1109287 AAGCACCGTCAGATA CGCTCCGGCGGC TTGAG GCCGCCGGA-CG CTCGGCACTATCGCG Atu1118 1111225 - 1109342 - | ABC transporter, nucleotide binding/ATPase protein TERM 1360 1109563 - 1109582 + g 76 -7.1 -4.4715 | gap 1, overlap 1109566 TGATCTTTTTCTTGA GCGGCGCC AGCTG GGCG-CGC TTTTCTGCATTGGCC TERM 1361 1110956 - 1110946 - G 71 -8.2 -4.07568 | opp_overlap 1110943 1110946, overlap 1110947 CCGCTTCGGCCAAAA GCGC GCT GCGC TCCTTGTCGGCGGCA Atu1119 1112257 - 1111295 - | hypothetical protein TERM 1362 1111462 - 1111421 - G 81 -8.6 -4.58395 | gap 1, overlap 1111422 GGCATGGCCGAAAAA TTCGGCGGCTGTGGCGGTG CCATC CACCGCCGC-GACACCGAT CGAAACCGTCAGATG TERM 1363 1111461 - 1111422 - G 76 -12.1 -3.34716 | gap 1, overlap 1111421 GCATGGCCGAAAAAT TCGGCGGCTGTGGCGGTG CCATC CACCGCCGC-GACACCGA TCGAAACCGTCAGAT TERM 1364 1111597 - 1111583 - G 74 -7.1 -4.32857 | opp_overlap 1111579, overlap 1111579 CCCGGCAAACAGAAA GGCGA ATTCA TCGCC ACCGATGCGAGCGAC TERM 1365 1113124 - 1113142 + G 76 -10.2 -3.78736 | overlap 1113126 CTTCCAGCCTTTCAT TGGCGGCG CGT CGCCGCTG TTTGCTGACTATATC TERM 1366 1113126 - 1113140 + G 79 -12.8 -3.47361 | overlap 1113124 TCCAGCCTTTCATTG GCGGCG CGT CGCCGC TGTTTGCTGACTATA ligE 1112597 - 1113292 + | lignin degradation protein ndk 1113392 - 1113814 + | nucleoside diphosphate kinase TERM 1367 1113885 - 1113902 + T 100 -4.7 -5.75342 | opp_overlap 1113885, overlap 1113887 AAAGACTCAAGGAAA CGGGGGC GAAA GGCTCCG TTTTTTTTGACAGGC Atu1123 1114449 - 1113937 - | hypothetical protein Atu1124 1114997 - 1114446 - | hypothetical protein TERM 1368 1115198 - 1115211 + G 74 -3.8 -4.77157 | overlap 1115195 CTTTGCCTTCGCCGG GCAG ACTTGC CTGC TTTTTGCTGACTTCG TERM 1369 1115705 - 1115717 + G 73 -4.8 -4.63218 | overlap 1115702 GGCAGCCATCGCCGG CGTG CTCGC CACG TTTTATTACGGCACC Atu1125 1115058 - 1115954 + | ABC transporter, membrane spanning protein moaE 1116474 - 1116007 - | molybdopterin converting factor, large subunit moaD 1116733 - 1116479 - | molybdopterin converting factor small subunit pgsA 1117320 - 1116733 - | phosphatidylglycerophosphate synthase uvrC 1119351 - 1117423 - | excinuclease ABC subunit C TERM 1370 1117702 - 1117689 - G 74 -5.9 -4.56702 | GCTGAATGAAATAAA GCACG GGAT CGCGC GGCGGCAGGGAAAAA Atu1130 1120253 - 1119465 - | short chain dehydrogenase TERM 1371 1119804 - 1119778 - G 83 -4.3 -5.1356 | gap 1, overlap 1119779 1119780 GTGTAGGAATAAAAA CGCGGCGTGAGC GCAA GCACACGCTG-G TCGATGATATTGACG TERM 1372 1119928 - 1119914 - G 71 -7 -4.18762 | opp_overlap 1119914 AATGGGCATCGAAAA CGGCCG GAT CGGGCG TTTCGGCGGTATCGG ropB 1120603 - 1121259 + | outer membrane protein TERM 1373 1121276 - 1121313 + T 100 -17.9 -4.17516 | opp_overlap 1121285, overlap 1121285 CCTTCTCGGATCGGT CAAGGAAAAGCCGGGGT TTAC GCCCCGGCTTTTTTTTG TTTCTGTGATTTGCC TERM 1374 1121285 - 1121304 + T 100 -12.8 -6.28967 | opp_overlap 1121285, overlap 1121276 ATCGGTCAAGGAAAA GCCGGGGT TTAC GCCCCGGC TTTTTTTTGTTTCTG TERM 1375 1121304 - 1121285 - T 95 -12.1 -4.41047 | opp_overlap 1121285 1121276 ATCGGTCAAGGAAAA GCCGGGG TTTACG CCCCGGC TTTTTTTTGTTTCTG TERM 1376 1121339 - 1121361 + T 100 -12 -4.63486 | TTGCCATCGCCTTAA CGCCCGGT GGAAAGA ACCGGGCG TTTTGTTCGGCGGGT Atu1132 1121973 - 1121377 - | glutathione S-transferase related protein rns 1122763 - 1122005 - | ribonuclease TERM 1377 1122677 - 1122691 + g 73 -4.2 -4.72272 | CCGGTCGTTTTCCGG CCCCTT CGA AACGGG TTTTTCCTGCGCAAA TERM 1378 1122986 - 1123011 + G 70 -3.2 -4.60889 | overlap 1122988 1122990 AAAAAATACATCTGG CCCGTCGTTG GTTTCG CGACGATTGG TTTTTCCGCCTGGTT Atu1134 1122962 - 1123909 + | hypothetical protein Atu1135 1124777 - 1123914 - | hypothetical protein TERM 1379 1125068 - 1125084 + G 73 -10.1 -3.61517 | overlap 1125069 ACCGCCGGCGTCATC TGCGCCA AGG TGGCGCG TTATTCCGAGCGCAT TERM 1380 1126479 - 1126506 + G 74 -5.6 -4.48987 | TCGATGCGCAGCCGC CTTTCGAGATGG CGCA TTATCTCGAGGG TTTTGGTTATGGCGA Atu1136 1124885 - 1127041 + | reductase TERM 1381 1127270 - 1127286 + G 75 -7.9 -4.15703 | GGAAGTGCATGACCA TGGCAGC GCC GCCGCCA TTCTTCTTTATGACG Atu1137 1127100 - 1127729 + | MutT family NTP pyrophosphatase Atu1138 1128242 - 1127886 - | protease VII precursor Atu1139 1128821 - 1128351 - | hypothetical protein TERM 1382 1128649 - 1128663 + g 88 -6.4 -4.87665 | GCATTTGTCGTTTTC CAGTCG AGC TGACTG TTTTTATGACTGCCG purN 1129561 - 1128956 - | phosphoribosylglycinamide formyltransferase garS 1130700 - 1129627 - | phosphoribosylaminoimidazole synthetase TERM 1383 1131014 - 1131025 + G 77 -3.6 -4.91712 | AGCGGCACGAGTCTG CGCC GACA GGTG TTTTTCTGGATTGGC Atu1142 1130984 - 1132141 + | permease TERM 1384 1132198 - 1132163 - g 76 -6 -4.58773 | gap 1, opp_overlap 1132184, overlap 1132164 1132170 CTGACCAAATCAAAA CCGACAAC-GCCCGGTC GAA GGCCGAGCAGCTGCCGC TCGCATTTTCGCACC TERM 1385 1132378 - 1132368 - g 76 -5.4 -4.62302 | overlap 1132370 1132373 CAATATCTGGAAAAA CATC AGC GATG CCCGCGACATTCACC Atu1143 1132144 - 1132872 + | hypothetical protein TERM 1386 1133370 - 1133385 + G 70 -10.4 -3.53012 | GAAGAAATCTTCATC GTGCGG CCTG CCGCAC TTTCCGAAGCGGACC ppk 1132974 - 1135172 + | polyphosphate kinase TERM 1387 1136272 - 1136241 - g 76 -7.2 -4.47456 | gap 1, overlap 1136242 AGACGGAAGAAGAAA GCCGCTACAGGCAGG CGG CCTGCCTGCTG-GCC GATATCAGCTGGCGG TERM 1388 1136663 - 1136677 + G 71 -5.6 -4.35044 | TTGGCGAAGCTGACG GGCAAG CGG CTGGCC TTTGTGTTTGAGTAA ppx 1135169 - 1136692 + | exopolyphosphatase Atu1146 1137356 - 1136724 - | acetyl transferase TERM 1389 1137517 - 1137536 + r 91 -7.2 -5.08601 | gap 1 AATATCACTTGTCGG CGATATCGG CCG CCGA-ATCG TTTTTCTTCCAGTAA Atu8089 1137853 - 1137506 - | hypothetical protein Atu1147 1138370 - 1138023 - | hypothetical protein TERM 1390 1138204 - 1138216 + g 76 -9.1 -4.08767 | TAGAAATGCTCGGCA CCGCT GAC AGCGG TTTTGGCAAGCTCGC TERM 1391 1138275 - 1138287 + g 76 -9.1 -4.07568 | GGTAACGCTGCCTTG CCCCT TGG AGGGG TTTTCACGCGACCAA TERM 1392 1138308 - 1138327 + g 100 -9.3 -4.87133 | overlap 1138295 ACGCGACCAAAGGTT GCTGGTC TCACCC GACCAGC TTTTCTTTAGGGCGT Atu1148 1139966 - 1138608 - | hypothetical protein TERM 1393 1138952 - 1138983 + g 72 -11.4 -3.36968 | CCGGCTTCTTCGGGT CGGCGCAGGCCTTG TCGG CGGTGCCGGCGCCG TTGTCGCGTTCGATG cya 1141139 - 1140111 - | adenylate cyclase TERM 1394 1141045 - 1141019 - G 71 -8.6 -4.13767 | GTGCGCAGGCGAAAA GCGCATAGGTCG CGC CGATCAACGCGC CGCCGCCATATTCCA Atu1150 1141924 - 1141394 - | hypothetical protein rnd 1143172 - 1142006 - | ribonuclease D TERM 1395 1142297 - 1142254 - G 71 -6.7 -4.1585 | gap 2, opp_overlap 1142252 1142296 GGAGAACCTTCAAAA GTTCCAC-GGCA-GCACCGGA ACCT TCCGGTGCGTGGCTGTGGCGC GGTGCCTTCGGCATC TERM 1396 1143274 - 1143296 + r 77 -4 -5.06451 | overlap 1143277 1143280 GGATCGTTTTTCTCG GGCGGATCGG GCT CCGGTTCATC TTTTTTGGGGTGGTC Atu1152 1144544 - 1143255 - | MFS permease TERM 1397 1144314 - 1144296 - G 72 -13.8 -2.53876 | opp_overlap 1144310 CGGCATGGCAATTGA GGCGGCCG ATG CGACCGCC GCCATCGTGGCGAAG TERM 1398 1145898 - 1145918 + G 74 -11.1 -3.41961 | overlap 1145901 CAGCAGCTCGGTCTC GAGGCGGGC GAT GCCTGCTTC TTCGTTGCTGGTGAT TERM 1399 1145901 - 1145915 + G 71 -9.2 -3.84246 | overlap 1145898 CAGCTCGGTCTCGAG GCGGGC GAT GCCTGC TTCTTCGTTGCTGGT Atu1153 1144725 - 1146512 + | aspartyl-tRNA synthetase TERM 1400 1146566 - 1146585 + G 100 -16.4 -4.32482 | TTCACCCGTGCATTG GCGGCCGC GCTT GCGGCCGC TTTTGCGTTCTGGGT Atu1154 1146515 - 1146991 + | hypothetical protein Atu1155 1147304 - 1148689 + | hypothetical protein TERM 1401 1148706 - 1148744 + F 79 -13.2 -2.72745 | opp_overlap 1148713, overlap 1148713 GCGAGACCGCATGGT CTGAAAAGCGGGCTGC TTAACTT GCGGCCCGCTTTTTTG CTGTTTATAGGTGGA TERM 1402 1148713 - 1148737 + F 100 -12.1 -5.34055 | opp_overlap 1148713, overlap 1148706 CGCATGGTCTGAAAA GCGGGCTGC TTAACTT GCGGCCCGC TTTTTTGCTGTTTAT TERM 1403 1148737 - 1148713 - f 83 -9.9 -4.08767 | opp_overlap 1148706 1148713 CGCATGGTCTGAAAA GCGGGCTGC TTAACTT GCGGCCCGC TTTTTTGCTGTTTAT TERM 1404 1149437 - 1149447 + G 70 -4.6 -4.54047 | overlap 1149428 CATCGTCGCCCTGAC CTGC GTG GCGG TTTTCTCTGGCATGG Atu1156 1148898 - 1150379 + | sulfate permease TERM 1405 1150410 - 1150390 - T 100 -14.7 -5.31877 | opp_overlap 1150390 ACTGAGTAGAAAAAA GCCCCGGTC TTA AACCGGGGC TTTGTCGTCCTATTC TERM 1406 1150390 - 1150410 + T 100 -14 -4.01853 | opp_overlap 1150390 ACTGAGTAGAAAAAA GCCCCGGT CTTAA ACCGGGGC TTTGTCGTCCTATTC Atu1157 1151610 - 1150420 - | hypothetical protein TERM 1407 1152593 - 1152567 - g 74 -7.2 -4.38712 | gap 1, overlap 1152569 TCGATGCCTATAAAA CGGGC-CGCGG CGGTTT CCGCGTGCGCG CCAAATGGGAAACGG TERM 1408 1152808 - 1152784 - g 89 -9.9 -4.56597 | overlap 1152786 TCTGGTGCCGAAAAA CCGCACCGTCG ACG CGACGCTGCTG ATGGAATCGCTGTTC TERM 1409 1154062 - 1154080 + G 74 -11 -3.55563 | CACCGTGCCGAAGGG CTTTCCGC GCA GCGGGAAG TTTGGCGGGTGAAAT parC 1151840 - 1154092 + | DNA topoisomerase IV subunit A Atu1159 1154947 - 1154189 - | arginyl-tRNA-protein transferase TERM 1410 1155066 - 1155052 - R 71 -5.7 -4.23007 | CACAGAATGGCAAAA TGACG GAAAA CGTCA ACTGCGGGATGAGCT TERM 1411 1155098 - 1155113 + r 74 -10.4 -3.56643 | opp_overlap 1155098 TTGGACGGGTAGAAA GCCACG TTTG CGTGGC TTTCCCCGATATCAG TERM 1412 1155113 - 1155098 - R 80 -10.4 -3.87815 | opp_overlap 1155098 TTGGACGGGTAGAAA GCCACG TTTG CGTGGC TTTCCCCGATATCAG Atu1160 1155583 - 1155125 - | hypothetical protein TERM 1413 1155254 - 1155244 - G 76 -6.8 -4.43844 | TGATGACCCAGAAAA GCAC GAT GTGC ACGGTCGCCAACAGG hemB 1156694 - 1155681 - | delta-aminolevulinic acid dehydratase TERM 1414 1156320 - 1156337 + g 75 -2.6 -5.00884 | overlap 1156309 GACATCGGTGATCAT GCCGAT ATTTGG AACGGC TTTTTTAACGGCGAT Atu1162 1156778 - 1157305 + | hypothetical protein TERM 1415 1157318 - 1157337 + F 95 -11.4 -4.67234 | opp_overlap 1157317 1157318, overlap 1157319 TAAGAATAAAGCAAT TCGGCCTG TTTT CAGGCCGG TTTTTCCGCTTAAGT TERM 1416 1157319 - 1157336 + F 84 -12.7 -3.39618 | opp_overlap 1157318 1157317, overlap 1157318 AAGAATAAAGCAATT CGGCCTG TTTT CAGGCCG GTTTTTCCGCTTAAG mucS 1157537 - 1158049 + | exopolysaccharide II synthesis transcriptional activator ExpG TERM 1417 1158074 - 1158098 + F 100 -15 -4.30014 | GGTTTCACTGTTTAA GCCGGGGGCA TCCTT TGCTCCCGGC TTTTGGATTCCTCGC TERM 1418 1158344 - 1158364 + F 71 -10.5 -3.29038 | overlap 1158348 GGTATTACCGGCCGG CAGACACGT TGT ACGTGTTTG TTAATCATATTGATT TERM 1419 1158348 - 1158360 + F 77 -7.7 -4.28713 | overlap 1158344 TTACCGGCCGGCAGA CACGT TGT ACGTG TTTGTTAATCATATT Atu1164 1158423 - 1159754 + | hypothetical protein TERM 1420 1159836 - 1159856 + F 76 -12.6 -2.80443 | GTCCCTCCGCCGTCA TCCTCGGG CTTGT CCCGAGGA TCTAATCACCTATCG TERM 1421 1159932 - 1159956 + F 100 -11.3 -4.6951 | GCGAGTGTGTGGCTT GGCCGCGCATC ATC GAAGCGCCGCC TTTATTTTCCGTCGT TERM 1422 1161199 - 1161183 - g 70 -3.5 -4.59773 | opp_overlap 1161195 1161196, overlap 1161185 TTCGACCCGGAAAAA CCCTTCG TCA CGTCGGG TGTCCGTCTCGGCAC glyA 1160109 - 1161398 + | serine hydroxymethyltransferase TERM 1423 1161588 - 1161574 - g 70 -3.4 -4.71426 | opp_overlap 1161575, overlap 1161575 TGGTCATCAAGAAAA GCGGCC GCA AGCTGC CGTTTGACCGGGAAA Atu1166 1161411 - 1161890 + | transcriptional regulator NrdR ribD* 1161893 - 1163137 + | bifunctional riboflavin deaminase-reductase ribc 1163137 - 1163748 + | riboflavin synthase subunit alpha Atu1170 1164042 - 1164674 + | RhtB family transporter TERM 1424 1164683 - 1164670 - f 74 -6.7 -4.36914 | opp_overlap 1164657 TGGCTTTCCAGAAAA GCTGA TTTT TCAGC CTTGCCGCACAGACA TERM 1425 1164874 - 1164885 + G 74 -5.8 -4.57837 | ACCCCATCTTCTTAT CGTG GAAG CACG TTTTTACGACGATAT TERM 1426 1165250 - 1165234 - g 73 -10.8 -3.56325 | CTCCGACAAGGACAA GGGCGG TTTTG CCGCCC GCGCGGCGCTCACCA ribH 1164851 - 1165297 + | riboflavin synthase subunit beta TERM 1427 1165375 - 1165319 - g 71 -8.5 -4.11216 | gap 1, opp_overlap 1165320, overlap 1165349 GTCGGATGTTGAAAA CGGCGGCGAACCGCGCCAGCCTTCGG TAAAGC CCGCCAACCAGCGCGGTGCGGC-CCG TCTAGCGGCCGTGCA nusB 1165302 - 1165799 + | transcription antitermination protein NusB Atu1173 1165821 - 1167044 + | MFS permease TERM 1428 1167523 - 1167535 + G 76 -10.5 -3.73775 | overlap 1167526 TCGGTGCGGTATTGT CCGGC GTC GCCGG TTTCGTCGGCATGCA rrpP 1167264 - 1169402 + | membrane-bound proton-translocating pyrophosphatase TERM 1429 1169421 - 1169458 + T 71 -8.3 -3.79043 | opp_overlap 1169428, overlap 1169422 CTACGGTTCCGACAA ATGAAAAGGCCCGGGGA GCGA TCCCCGGGCCTTCGAAC TTTCCGTTCCTGCTG TERM 1430 1169422 - 1169457 + T 75 -11.8 -2.86944 | opp_overlap 1169428, overlap 1169421 TACGGTTCCGACAAA TGAAAAGGCCCGGGGA GCGA TCCCCGGGCCTTCGAA CTTTCCGTTCCTGCT TERM 1431 1169451 - 1169428 - T 100 -19.6 -4.61873 | opp_overlap 1169422 1169421 TCCGACAAATGAAAA GGCCCGGGGA GCGA TCCCCGGGCC TTCGAACTTTCCGTT Atu1175 1170010 - 1169477 - | hypothetical protein TERM 1432 1170354 - 1170375 + G 70 -5 -4.56358 | opp_overlap 1170315 ATATGCGACCTTGAC GGCGGCTG CGCGCA CGCCCGCC TTTTATCTCGATCTA Atu1176 1170283 - 1170819 + | hypothetical protein Atu1177 1170831 - 1171394 + | hypothetical protein TERM 1433 1171405 - 1171389 - f 76 -2.9 -5.10077 | overlap 1171396 AAAGATTGGAAAAAA GACTGAA TGG CCCAGCC GGGCTGAAATAATTT TERM 1434 1171977 - 1171999 + G 71 -6.9 -4.2349 | gap 1, overlap 1171976 CGATTTCGCCCTGAT GGGCG-GCGC CATG GCGCGCGCAC TTTTCGATATCGACC plsX 1171495 - 1172556 + | putative glycerol-3-phosphate acyltransferase PlsX TERM 1435 1172738 - 1172712 - g 73 -10 -3.66178 | CCGGCGAAGGTGAAA CCACCGCGTCTC TCG GCGAGGCGGCGG CGCGTGCGGCGCTCG fabH 1172561 - 1173532 + | 3-oxoacyl-(acyl carrier protein) synthase III ihfA 1173774 - 1174112 + | integration host factor subunit alpha TERM 1436 1174129 - 1174141 + F 71 -4.7 -4.64766 | overlap 1174130 CCGGACTTGAAGCCG CCGCG ACA CGCGC TTTTTGCCGTATCGC TERM 1437 1174448 - 1174463 + G 78 -10.4 -3.85698 | overlap 1174458 1174460 ATGAGCTGAACCTGC CGCAGC ATGT GCTGCG TTTCTGGGAAACGCG TERM 1438 1174765 - 1174778 + G 80 -3.7 -5.09426 | overlap 1174744 1174766 1174775 GGCCGTCCGAAGGCC AGGCC GAGC GGCCG TTTTTTCGGCTTCGG Atu1181 1174387 - 1174920 + | hypothetical protein TERM 1439 1175387 - 1175373 - g 88 -6.4 -5.00616 | overlap 1175375 CCTCGGTCGAAAAAA TCTCGC TCG GCGAAA AAAGCGGTGCCTTTG Atu1182 1175006 - 1175734 + | hypothetical protein TERM 1440 1175795 - 1175826 + F 74 -7.2 -4.15453 | gap 1 TCGCGTTTGGGATCG GCCGTC-TGGCCGGG CGC CCTGGGGATGACGGC TTTTGCAGTGCCTTG TERM 1441 1175944 - 1175969 + F 100 -9 -5.06103 | opp_overlap 1175944 GTTTCAGAATAACGA GGCGTGGAAC CTAGCA GTTCTGCGCC TTTTTTACGACTTAT TERM 1442 1176215 - 1176259 + F 100 -10.6 -5.07652 | gap 1, opp_overlap 1176215, overlap 1176255 AAACCCCTCACCATA GGCCCAGTCCCCGGTTCACTT ACTT AGGTGTTCCGAGGGC-GGGCC TTTTCTTTTGGAAGG TERM 1443 1176673 - 1176702 + G 70 -3.5 -4.68424 | gap 1 ACGCCGCTGTCCATC CGGCTCG-CTGCGA TGG TCGAGGATGAGCTG TTTTTCAATGCGTTC Atu1183 1176283 - 1178874 + | DNA-directed RNA polymerase Atu1184 1178871 - 1179104 + | hypothetical protein Atu1185 1179599 - 1179381 - | hypothetical protein TERM 1444 1179659 - 1179638 - H 71 -10.9 -3.24032 | overlap 1179636 ACCTGCCAATCAAGA TGCCCGGAA CATA TTCCGAGCA GTTGCCCAACCTTGG Atu1186 1179671 - 1179940 + | hypothetical protein TERM 1445 1179963 - 1179990 + F 100 -12.7 -4.50686 | CGATCAAACCTTTCG GCCCTCGTCAC ATAACA GTGGCGGGGGC TTTCTTCGTTTTTGG Atu1187 1180014 - 1181390 + | phage tail fiber protein Atu1188 1181501 - 1181833 + | hypothetical protein Atu1189 1181842 - 1182105 + | hypothetical protein TERM 1446 1182606 - 1182570 - f 72 -11.7 -2.57132 | opp_overlap 1182573 1182575, overlap 1182554 1182576 TCTTCGCTGGAGAAC GAAAAAGGCCAAGGT CTCGATC ACCTTGGCCCTATTC ATAACCCTATAGCGA TERM 1447 1182600 - 1182576 - f 100 -11.5 -4.93365 | opp_overlap 1182575 1182573, overlap 1182570 CTGGAGAACGAAAAA GGCCAAGGT CTCGATC ACCTTGGCC CTATTCATAACCCTA TERM 1448 1183044 - 1182999 - g 71 -6.2 -4.36914 | opp_overlap 1183041 CCGGCCTTGATAAAA TCGCCGCGT-TTGTCGAGCTTT GCGA AGAGCACGACATGAC-CGGCGA AGACATGGCCGCTAT Atu1190 1182710 - 1183300 + | hypothetical protein Atu1191 1183411 - 1183728 + | hypothetical protein Atu1192 1184274 - 1184741 + | MarR family transcriptional regulator int 1184885 - 1186051 + | phage-related integrase TERM 1449 1186435 - 1186450 + F 100 -5.4 -5.75342 | TCTTGACCTTGCCAC GATGGG AAGC CCTATC TTTTTTTTAACACAA TERM 1450 1186574 - 1186590 + G 76 -9.3 -4.08767 | TGTGGAGAAGGCGAT CGCCAGG GTG CCGGGCG TTTTGAAGGCCTCGG Atu1195 1186479 - 1188989 + | heavy-metal transporting P-type ATPase Atu1196 1189005 - 1190012 + | naphthalene 1,2-dioxygenase cueR 1190024 - 1190512 + | MerR family transcriptional regulator nikB 1190587 - 1191531 + | ABC transporter, membrane spanning protein dppC 1191521 - 1192426 + | ABC transporter, membrane spanning protein TERM 1451 1192564 - 1192550 - f 76 -2.8 -5.10461 | CCGATTCAATAAAAA TAAGGG GAA CTCTTA TGAATATCGAAGGGC dppD 1192564 - 1193631 + | ABC transporter, nucleotide binding/ATPase protein TERM 1452 1194161 - 1194183 + G 71 -9 -3.8211 | CGGCGGCCAGTTGCA GCGCGTCGTC ATC GGCCGCGCGC TTCTTCTCAATCCGA Atu1201 1193640 - 1194653 + | ABC transporter, nucleotide binding/ATPase protein TERM 1453 1194738 - 1194722 - f 74 -9.5 -3.70622 | overlap 1194720 GTACGTAAAATAATA TCGGAAT AAA ATTCCGA ATACAAAAACATAGT Atu1202 1194886 - 1196379 + | ABC transporter, substrate binding protein TERM 1454 1196420 - 1196397 - T 100 -12.4 -4.7373 | overlap 1196399 CGACGTTATGAAAAA GACCCGGCTC CCAG GAGCCGGGTT CCACAAAGACGTAGT TERM 1455 1196418 - 1196399 - T 100 -15 -3.98658 | overlap 1196397 ACGTTATGAAAAAGA CCCGGCTC CCAG GAGCCGGG TTCCACAAAGACGTA TERM 1456 1196463 - 1196504 + T 77 -7.2 -4.36914 | gap 2, opp_overlap 1196485 1196486 AACCCGATCAATGTT CCCCGCTCTTGC--ACGCGC ATAA GCCCGGCAGCAAGCGCGGGG TTTTGTCACGACCGA TERM 1457 1196700 - 1196671 - T 79 -11.3 -3.63627 | opp_overlap 1196671 CGGGCATAGGGCAAA CCGACGGCCGCAT GGAA AAGCCGCCGCCGG TATCTCTTCGGATCA Atu1203 1196967 - 1196713 - | hypothetical protein trkH 1198411 - 1197074 - | potassium uptake protein TERM 1458 1198980 - 1198964 - g 83 -2.9 -5.17054 | overlap 1198965 AGAAGATCGAAAAAA CCCGC ATCTTTG GCGGA GAGTTCATCAAGATC TERM 1459 1199871 - 1199859 - g 75 -7.7 -4.22652 | GGATATTACCGAAAA CGACA TCT TGTCG AACCTGATCATCTGA ilvA 1198612 - 1199886 + | threonine dehydratase TERM 1460 1199926 - 1199908 - f 78 -11.7 -3.16534 | ACGAACGACAGGGAA GGGCGGA TCACC TCCGCCC TTCAAACGTGATATT Atu1206 1199961 - 1200272 + | hypothetical protein TERM 1461 1200248 - 1200277 + F 76 -5.1 -4.71426 | gap 1, overlap 1200265 CATCGATCAGAACGG CG-CATCACTTTTC CCA GGAAAATGATGACG TTTTCTTGCTCCGGA TERM 1462 1200433 - 1200389 - f 74 -10.1 -3.75817 | opp_overlap 1200399, overlap 1200387 1200390 TGCGCAGAACAAAGA GTTAGAGCAATTCCGGTGAAC CGC GTTCACAGCAATTGCTCTAGA GGGCGTGGAGTCGCG TERM 1463 1200432 - 1200390 - f 79 -13.6 -2.85008 | opp_overlap 1200399, overlap 1200389 1200387 GCGCAGAACAAAGAG TTAGAGCAATTCCGGTGAAC CGC GTTCACAGCAATTGCTCTAG AGGGCGTGGAGTCGC TERM 1464 1201162 - 1201176 + G 86 -12.8 -3.85698 | TATCTCTGGCTGACA GCGGCC AAG GGCCGC TTTCTGACACGGCGC TERM 1465 1201736 - 1201707 - g 100 -15.1 -5.02074 | gap 1 CTACGCGGCAAAAAA TAACGGCCG-GGAC CAG GTCCACGGCCGTCA TGGCATGTGGGTCGG Atu1207 1200490 - 1201755 + | GGDEF family protein TERM 1466 1201750 - 1201779 + T 100 -17.9 -3.33696 | CATGGCATGTGGGTC GGCTGATGCCGGC GATA GCCCGCATCAGCC TTCATTCAACGGGAA acpD 1202412 - 1201795 - | acyl-carrier-protein phosphodiesterase TERM 1467 1201993 - 1201983 - G 75 -8.2 -4.15044 | overlap 1201984 GGCCTTCGGAATAAA CGCC GGC GGCG GCCAGCACGATATAG TERM 1468 1202866 - 1202912 + G 71 -7.8 -4.08064 | overlap 1202867 1202876 GAGCTTTCCGTCGCC ATCAGCACCATGGTGCCGGCTG AGG CAGTCGTCGCCGTGTTGCGGGA TTTTCGCGAACAGTT Atu1209 1202563 - 1203531 + | LysR family transcriptional regulator TERM 1469 1203619 - 1203571 - T 83 -12.3 -3.72324 | TATTTGGATCAAGAA GGTGCCGCTTGCTTCTCCTCCCC GGC AGGGAGATGGAACAAGCGGCGGC GTAGGGCCCTTGCCT cpdB 1205715 - 1203727 - | bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein Atu8149 1206234 - 1205899 - | hypothetical protein Atu1212 1206801 - 1206334 - | hypothetical protein Atu1213 1207142 - 1207849 + | hypothetical protein Atu1214 1207901 - 1208545 + | DNA-binding protein Atu1215 1210186 - 1208765 - | thiosulfate sulfurtransferase TERM 1470 1210115 - 1210135 + g 74 -5.3 -4.57073 | opp_overlap 1210108 1210118, overlap 1210118 1210120 CGCATCAACGACACG AAACCCGGC CGT GCCGAGTTG TTTTTCCACCCAGTC TERM 1471 1210132 - 1210118 - G 73 -9.2 -3.89302 | opp_overlap 1210115 1210118 1210120, overlap 1210108 ATCAACGACACGAAA CCCGGC CGT GCCGAG TTGTTTTTCCACCCA TERM 1472 1210118 - 1210132 + g 74 -7 -4.40561 | opp_overlap 1210108 1210118, overlap 1210115 1210120 ATCAACGACACGAAA CCCGGC CGT GCCGAG TTGTTTTTCCACCCA alaS 1210940 - 1210203 - | alanyl-tRNA synthetase cysK 1211990 - 1210953 - | cysteine synthase A Atu1218 1213552 - 1212113 - | DNA photolyase TERM 1473 1213336 - 1213348 + g 70 -4.7 -4.56597 | CGCTTGCGAGCACGA GGCGG CCG CCGGC TTTTTCAAGCGAGGA Atu1219 1213726 - 1214022 + | hypothetical protein TERM 1474 1214046 - 1214076 + F 100 -13.3 -5.44119 | overlap 1214049 ACGACCGATGCACTG GAAGGCCACCCGG CAAAA TCGGGTGGCCTTA TTTTTTTGAGATAGG TERM 1475 1214049 - 1214073 + F 100 -15 -4.80853 | overlap 1214046 ACCGATGCACTGGAA GGCCACCCGG CAAAA TCGGGTGGCC TTATTTTTTTGAGAT Atu1220 1214172 - 1214729 + | methylated-DNA--protein-cysteine methyltransferase Atu1221 1214843 - 1215286 + | hypothetical protein TERM 1476 1215324 - 1215307 - f 80 -10.5 -3.89055 | opp_overlap 1215300 1215307 AGACAGTCTGATAAA GGCGGGC TCTG ACCCGCC TTATACATTTCAAGA TERM 1477 1215307 - 1215324 + F 71 -9.8 -3.47349 | opp_overlap 1215307, overlap 1215300 AGACAGTCTGATAAA GGCGGG CTCTGA CCCGCC TTATACATTTCAAGA Atu1222 1215424 - 1216155 + | hypothetical protein TERM 1478 1216302 - 1216330 + G 84 -16.8 -2.75252 | overlap 1216299 CGAAGCGCATGTATC GTTTGGCCGGTC ACTTG GGCCGGCCAAAC TAATGTTGCGGTCGT Atu1223 1216222 - 1216578 + | hypothetical protein TERM 1479 1217244 - 1217259 + F 76 -3.2 -5.00616 | overlap 1217255 1217256 AATACAAATGCTTTT CCGATT TGCC AAGCGG TTTTTTCAAAAAAAA Atu1225 1217373 - 1217645 + | hypothetical protein exoD 1218295 - 1217651 - | exoD protein TERM 1480 1219239 - 1219253 + G 85 -7 -4.77036 | overlap 1219242 CTTTCGGCCATCGTC GCACGC GGC GCGCGC TTTTTCATCCTCGCC Atu1227 1218804 - 1219391 + | hypothetical protein TERM 1481 1219383 - 1219401 + F 79 -3.1 -5.1615 | overlap 1219384 GCGGTTTACGTTTTC GTGCGTT GATCA AACGCAA TTTTTTCACTCTTAC TERM 1482 1219463 - 1219489 + F 90 -8 -4.77165 | overlap 1219465 AGAATCTACATGTAT CCGTTCTCTCGT CCA ATGAGGGAACCG TTTTATTATGCGAAG Atu8150 1219497 - 1220084 + | hypothetical protein Atu1229 1220225 - 1220512 + | hypothetical protein Atu1230 1220724 - 1221071 + | hypothetical protein TERM 1483 1221106 - 1221078 - f 83 -8.2 -4.45117 | opp_overlap 1221080 1221082, overlap 1221080 GATAGCTGAAACAAA TATAGCCAGCTC TGGGG GAACTGGCTATC TATCTGATTTAATGG TERM 1484 1221104 - 1221080 - f 80 -10.8 -3.82628 | opp_overlap 1221080 1221082, overlap 1221078 TAGCTGAAACAAATA TAGCCAGCTC TGGGG GAACTGGCTA TCTATCTGATTTAAT Atu1232 1221425 - 1221961 + | hypothetical protein TERM 1485 1222013 - 1221971 - T 100 -15.7 -4.5442 | gap 1, opp_overlap 1221972 1221978, overlap 1221978 GTCTGAAGGAGAAAA GCAACAACACTGCGGCATGG TCCT CCATGCCGCAGCGT-GTCGT TCGGTGTGCCGGAGC TERM 1486 1221972 - 1222012 + T 91 -14.8 -3.12351 | gap 1, opp_overlap 1221971 1221978, overlap 1221978 TCTGAAGGAGAAAAG CAACAACACTGCGGCATGG TCCT CCATGCCGCAGCGT-GTCG TTCGGTGTGCCGGAG TERM 1487 1221978 - 1222007 + T 95 -17.9 -2.93164 | opp_overlap 1221971 1221978, overlap 1221972 GGAGAAAAGCAACAA CACTGCGGCATGG TCCT CCATGCCGCAGCG TGTCGTTCGGTGTGC TERM 1488 1222007 - 1221978 - T 100 -20.1 -3.9978 | opp_overlap 1221978 1221972, overlap 1221971 GGAGAAAAGCAACAA CACTGCGGCATGG TCCT CCATGCCGCAGCG TGTCGTTCGGTGTGC Atu1233 1222712 - 1222035 - | hypothetical protein TERM 1489 1222154 - 1222140 - G 70 -12.8 -2.87344 | GATGGTGTCGACATA GGCGCC GCT GGCGCC CTTGGCATAGGTCGA TERM 1490 1222815 - 1222770 - R 100 -20.6 -3.78934 | gap 1, opp_overlap 1222772 1222808 1222809 CTCCTCTCATAAGAA GACCGGGTGCAT-CCAGGCCA TATTT CGGCTTGGGATGCACCCGGTC TTAAAGGCCGGACTT TERM 1491 1222772 - 1222813 + r 100 -18.9 -3.01712 | gap 1, opp_overlap 1222770, overlap 1222808 1222809 CCTCTCATAAGAAGA CCGGGTGCATC-CAGGCC ATATTTC GGCTTGGGATGCACCCGG TCTTAAAGGCCGGAC Atu8151 1223042 - 1222848 - | hypothetical protein Atu1235 1224316 - 1223075 - | hypothetical protein TERM 1492 1223678 - 1223668 - G 93 -8.2 -5.0916 | TGGCGAACAGAAAAA GGCC CCA GGCC GCGCGTGAAAACGAC Atu1236 1225866 - 1224313 - | polysaccharide biosynthesis glycosyltransferase TERM 1493 1225275 - 1225302 + g 80 -14.8 -3.05715 | gap 1, opp_overlap 1225261 GGTCTCTCGCGGCAT CGCCGCCGCCGAC GAT GACGGCG-CGGCG TTCCATCACGCCGTT Atu1237 1227271 - 1226090 - | glycosyl transferase gumB 1227821 - 1227249 - | polysaccharide export protein exoP 1228032 - 1230293 + | exopolysaccharide production protein Atu1240 1231541 - 1230312 - | hypothetical protein TERM 1494 1231473 - 1231502 + g 82 -11.3 -3.98214 | opp_overlap 1231462, overlap 1231462 CAGACGATCGGCACC GCGCCGCTCGTTG TGCA CGGCGGTCGGCGC TTTATCCTCGCTGAT Atu1241 1231851 - 1231639 - | hypothetical protein cox15 1231979 - 1233097 + | cytochrome oxidase assembly factor strB 1233949 - 1233104 - | streptomycin resistance protein TERM 1495 1233137 - 1233160 + g 82 -12.4 -3.65314 | overlap 1233133 1233132 TGCCTTGATGGTTGC CGCGACGGCG AGTT CGTTGTCGCG TTCTTCCGCATTGCC argC 1234878 - 1233946 - | N-acetyl-gamma-glutamyl-phosphate reductase TERM 1496 1234928 - 1234939 + r 86 -7.2 -4.71426 | TATTCGGAATCAGTT CGGC AAGT GCCG TTTTATTCGTCAGCC speB 1235902 - 1234949 - | agmatinase TERM 1497 1235979 - 1235998 + r 86 -10.6 -4.22338 | opp_overlap 1235979 AGGGTCATGAAAAAA GGCGGAGC CGAA GCCCCGCC TTTTGAAGTTCTGAT TERM 1498 1235998 - 1235979 - R 100 -12.8 -5.14965 | opp_overlap 1235979 AGGGTCATGAAAAAA GGCGGAGC CGAA GCCCCGCC TTTTGAAGTTCTGAT rpsI 1236501 - 1236034 - | 30S ribosomal protein S9 rplM 1236968 - 1236504 - | 50S ribosomal protein L13 Atu1248 1238057 - 1237221 - | hypothetical protein TERM 1499 1238222 - 1238236 + r 71 -6.4 -4.30177 | CAGATATTGCTACAC GCGTAA AAT TTGCGC TTTGTTCATGTCGTC Atu1249 1238836 - 1238564 - | hypothetical protein TERM 1500 1239018 - 1239001 - g 78 -4.9 -4.86001 | ACTATCTCAGAAAAA TTCTGAC TGAC GTCAAAA CCATCGCCCTGCTCG Atu1250 1238961 - 1239395 + | hypothetical protein cysD 1239469 - 1240752 + | O-acetylhomoserine aminocarboxypropyltransferase TERM 1501 1240849 - 1240801 - f 100 -19 -2.72344 | gap 1, opp_overlap 1240798 1240817 1240819, overlap 1240816 GCCGACTTGTAACCA CGCAGCCGCCGGAAAGCCCCTTG AAAA CAAGGTGTTTTC-GGCAGCTGCG ACCGTGCTCTTCCTG Atu1252 1240976 - 1241491 + | hypothetical protein Atu1253 1241666 - 1242007 + | hypothetical protein TERM 1502 1241993 - 1242018 + T 70 -9.7 -3.36991 | overlap 1241992 ACGCGGAAGGATTAC GTCATCCGGCT TTGA GGCGGGATGAC TGTTTGAAGCTGCTA Atu1254 1242345 - 1242031 - | ArsR family transcriptional regulator TERM 1503 1242420 - 1242394 - H 78 -6.5 -4.6759 | opp_overlap 1242400, overlap 1242400 AATATTTTAATAAAA CCGAAATACCG AATTA CGGTTATTCGG AAATTTAGATATTTT Atu1255 1242448 - 1243206 + | oxidoreductase Atu1256 1244477 - 1243230 - | cytochrome P450 hydroxylase Atu1257 1245814 - 1244567 - | GGDEF family protein TERM 1504 1245882 - 1245849 - H 74 -7.3 -4.10161 | gap 1, opp_overlap 1245860 CATCATGCGGTAAAA GCGGGACCTTTCGCAC GAG GTGCGTTATG-CCCGC TGGAATTGTTGAGCT TERM 1505 1246084 - 1246069 - H 74 -10.4 -3.59979 | TGGCGGCAGGTGAAA GGGCCT CGGC AGGCCC CGTCCGGTTCAAAAC clpP 1246266 - 1246898 + | ATP-dependent Clp protease proteolytic subunit clpX 1247190 - 1248467 + | ATP-dependent protease ATP-binding subunit TERM 1506 1248464 - 1248449 - T 81 -6.8 -4.71426 | CCGCCAGGAAGAAAA GGCCAA CGTT TCGGCC TGATCGGCTGATCCG TERM 1507 1248500 - 1248519 + T 100 -15 -5.60689 | opp_overlap 1248493 TTGACGAATTTCGAA GGCCCGCA TCCG TGCGGGCC TTTTTTATTATGTCC Atu1260 1248797 - 1248552 - | hypothetical protein TERM 1508 1251118 - 1251103 - g 78 -6.8 -4.63932 | GATTCCGGAAGAAAA CGCCAA GGAT CTGGCG GAGATTCCGGACAAT lon 1248881 - 1251298 + | ATP-dependent protease LA TERM 1509 1251434 - 1251453 + F 100 -11.4 -5.24129 | CACGAATATGTGGAA GGCCGGCA GAAA TGTCGGCC TTTTTTGTGAAAAAA hupA 1251588 - 1251863 + | histone-like protein TERM 1510 1251876 - 1251904 + F 75 -6 -4.59773 | gap 1, overlap 1251880 TAAGGTTTCCGGAAA GTTGCGATGTCCG GCGG CGGGCAT-GCGGC TTTTTCAGGCTCACG TERM 1511 1252097 - 1252117 + F 100 -15.4 -4.93365 | opp_overlap 1252097 CGCATAAACACGAAA GCCCGGCC TCCAT GGCCGGGC TTTTTGATTCTCCGC TERM 1512 1252117 - 1252097 - f 100 -15.4 -4.04579 | opp_overlap 1252097 CGCATAAACACGAAA GCCCGGCC TCCAT GGCCGGGC TTTTTGATTCTCCGC TERM 1513 1254054 - 1254070 + G 82 -11.5 -3.89346 | opp_overlap 1254048 1254051 GCTCGACAAGACCGA GGCCGGC TGG GTCGGCC TTTCTGAAATCACCG Atu1263 1252207 - 1254405 + | hypothetical protein TERM 1514 1254457 - 1254431 - f 91 -15.2 -3.00946 | opp_overlap 1254436, overlap 1254436 TGGCGTTACAAATGA GAAAAGCCGGGC ATA GCCCGGCTTTTT TGTATCGCCAAGAGA TERM 1515 1254436 - 1254452 + F 100 -15.1 -5.36441 | opp_overlap 1254436 1254431 TTACAAATGAGAAAA GCCGGGC ATA GCCCGGC TTTTTTGTATCGCCA TERM 1516 1254452 - 1254436 - f 100 -15.1 -4.64846 | opp_overlap 1254436, overlap 1254431 TTACAAATGAGAAAA GCCGGGC ATA GCCCGGC TTTTTTGTATCGCCA TERM 1517 1254639 - 1254649 + G 70 -3.2 -4.60487 | GAACTGCGGCTTTTG GGAG TAT CTTC TTTTTCCGAGTCCTG Atu1264 1254476 - 1254769 + | hypothetical protein TERM 1518 1255829 - 1255814 - f 86 -6.8 -5.01732 | overlap 1255818 1255821 AATGTCTCCAAAAAA CGAAGC AGAC GCCTCG AGCGCCCACTTTGGT nuoA 1256220 - 1256585 + | NADH dehydrogenase subunit A nuoB 1256555 - 1257160 + | NADH dehydrogenase subunit B nuoC 1257182 - 1257784 + | NADH dehydrogenase subunit C Atu1271 1257781 - 1258209 + | hypothetical protein nouD 1258211 - 1259401 + | NADH dehydrogenase subunit D TERM 1519 1259444 - 1259483 + G 70 -12.1 -2.93382 | gap 1 TTCTCGCTGCGATGT CCACCCCCGTTC-TCGCC CAGAC GGCGACGGACGAGGGCGG TGTATCGCTGTCGGG Atu1273 1259401 - 1259661 + | hypothetical protein TERM 1520 1260701 - 1260689 - g 73 -10.5 -3.66654 | TATCTGAATTTCAAA GGCCG TAT CGGCC GTGATGACTGGGTCA nuoE 1259678 - 1260787 + | NADH dehydrogenase subunit E nuoF 1260798 - 1262102 + | NADH dehydrogenase I subunit F TERM 1521 1262331 - 1262347 + G 83 -4.3 -5.13722 | overlap 1262344 CGTGCGAGGAGGCTG GTGCCGA AGT TCCGCGC TTTTGTTTTCATGAG TERM 1522 1263976 - 1263953 - g 70 -3.2 -4.70659 | gap 1, opp_overlap 1263945, overlap 1263955 GCCTATACCGAAAAA TCCGGTATCTG GGT CA-ACACCGAA GGCCGTGTTCAGGTG nuoG 1262252 - 1264333 + | NADH dehydrogenase subunit G nuoH 1264347 - 1265393 + | NADH dehydrogenase subunit H nuoI 1265430 - 1265921 + | NADH dehydrogenase subunit I TERM 1523 1266249 - 1266263 + G 74 -5.6 -4.44797 | overlap 1266247 TTGTGGTCTATGTCG GCGCTG TCG CGGTGC TTTTCCTCTTCGTCG nuoJ 1266059 - 1266673 + | NADH dehydrogenase subunit J nuoK 1266703 - 1267011 + | NADH dehydrogenase subunit K nuoL 1267019 - 1269016 + | NADH dehydrogenase subunit L nuoM 1269016 - 1270527 + | NADH dehydrogenase subunit M nuoN 1270546 - 1271988 + | NADH dehydrogenase subunit N birA 1271985 - 1272755 + | birA bifunctional protein TERM 1524 1273199 - 1273159 - g 75 -2.5 -4.91109 | overlap 1273162 CGCCGAGCAGAAAAA GAACCTCAAGGGCAT CATCATCACCC ACGCCCATGAGGACC ATTATGGTGCAATGA TERM 1525 1273196 - 1273162 - g 70 -5 -4.56153 | overlap 1273159 CGAGCAGAAAAAGAA CCTCAAGGGCAT CATCATCACCC ACGCCCATGAGG ACCATTATGGTGCAA Atu1285 1272959 - 1274626 + | metal dependent hydrolase TERM 1526 1274681 - 1274708 + F 100 -14.1 -4.83246 | opp_overlap 1274681 CGCTTCGTTGAATTA GGGGGCCGTGC CGAAAA GCGCGGCCCTC TTTGTTTCTTTGTGG Atu1286 1274803 - 1275072 + | hypothetical protein TERM 1527 1275099 - 1275076 - f 80 -9.4 -4.18018 | GTTTTCGATTGAAAA GGCGCTGACG ATGT CGGCCGCGCC TGCATCCGTGCACTC TERM 1528 1275306 - 1275323 + G 78 -7 -4.70879 | opp_overlap 1275306 AAAAGCAAAAAAAAA CAAGGC ATTTCA GCCTTG TTTTTCAGGTTTCGC TERM 1529 1275323 - 1275306 - g 100 -7 -6.31682 | opp_overlap 1275306 AAAAGCAAAAAAAAA CAAGGC ATTTCA GCCTTG TTTTTCAGGTTTCGC Atu1287 1275148 - 1275342 + | hypothetical protein proS 1275738 - 1277060 + | prolyl-tRNA synthetase TERM 1530 1277109 - 1277074 - f 71 -8.2 -3.85567 | opp_overlap 1277076 1277077 1277078, overlap 1277076 1277077 AAGCGCAAAGGGAAA GATGGGAGCGGCCTTC ATGC GAAGACCGCTCCGGTT TTATGGCGCAGGCGC TERM 1531 1277107 - 1277076 - f 74 -10.8 -3.50832 | opp_overlap 1277076 1277077 1277078, overlap 1277074 1277077 GCGCAAAGGGAAAGA TGGGAGCGGCCTTC ATGC GAAGACCGCTCCGG TTTTATGGCGCAGGC TERM 1532 1277076 - 1277107 + F 90 -10.8 -4.36914 | opp_overlap 1277076 1277074 1277077, overlap 1277077 1277078 GCGCAAAGGGAAAGA TGGGAGCGGCCTTC ATGC GAAGACCGCTCCGG TTTTATGGCGCAGGC TERM 1533 1277106 - 1277077 - f 81 -14.3 -2.70017 | opp_overlap 1277076 1277077 1277078, overlap 1277076 1277074 CGCAAAGGGAAAGAT GGGAGCGGCCTTC ATGC GAAGACCGCTCCG GTTTTATGGCGCAGG TERM 1534 1277077 - 1277106 + F 78 -12.1 -3.21934 | opp_overlap 1277077 1277076 1277074, overlap 1277076 1277078 CGCAAAGGGAAAGAT GGGAGCGGCCTTC ATGC GAAGACCGCTCCG GTTTTATGGCGCAGG TERM 1535 1277078 - 1277105 + F 85 -15.6 -2.52946 | opp_overlap 1277077 1277076 1277074, overlap 1277077 1277076 GCAAAGGGAAAGATG GGAGCGGCCTTC ATGC GAAGACCGCTCC GGTTTTATGGCGCAG TERM 1536 1277227 - 1277249 + G 74 -3.3 -4.7416 | opp_overlap 1277212 1277211 1277238, overlap 1277229 1277230 GGTGCGGCTCCTTCC GCCCGGG AAAGGACCG CCCGGCC TTTTTCCGCTTTTGA TERM 1537 1277318 - 1277330 + G 90 -4.7 -5.33405 | AGGAAGCCTTCATTT CCGTC ATC GCCGG TTTTTCTTTCGTCGG TERM 1538 1277871 - 1277887 + G 70 -4.3 -4.46112 | GATGATCTATATGCC GCTGTCC GAG GCGCAGC TTTATTTCAATGCCA Atu1289 1277188 - 1278495 + | ABC transporter, membrane spanning protein lolD 1278586 - 1279194 + | ABC transporter, nucleotide binding/ATPase protein (lipoprotein) Atu1291 1279607 - 1279215 - | hypothetical protein TERM 1539 1279338 - 1279361 + g 100 -18.2 -5.56264 | overlap 1279332 TGAATCTTTCTCGGA CCCGGAGGTG TTTT CACCTCCGGG TTTTTTCTCTTTGGA TERM 1540 1280361 - 1280384 + G 95 -11 -4.62069 | opp_overlap 1280359 1280352, overlap 1280363 TATGAACACGATATC CCCCTCGTTG CCAC CAACGAGGCG TTTTTCCCGTCCAAG TERM 1541 1280614 - 1280595 - g 84 -5.6 -5.0133 | gap 1, opp_overlap 1280595 TATGTGCTGAAAAAA CGCGGGCCG ATC CTGCC-GCG TTTCACCGGCGCCAG TERM 1542 1281974 - 1281959 - g 70 -3.2 -4.72272 | TGGCGCCATTAAAAA CGGTGT GTCG AAACCG CAGGCCAACACCATC dnaE 1279704 - 1283207 + | DNA polymerase III subunit alpha Atu1293 1284457 - 1283219 - | hypothetical protein TERM 1543 1283867 - 1283886 + g 84 -3.4 -5.26875 | overlap 1283840 1283839 GGCTTTGGTCTTTGC CGCCGGTT TGAT GGCCTGCG TTTTTTCATTGACGG dinP 1285831 - 1284614 - | DNA polymerase IV Atu8152 1286275 - 1285967 - | hypothetical protein divK 1286407 - 1286778 + | two component response regulator pleD 1286797 - 1288167 + | response regulator PleD Atu1298 1288164 - 1288403 + | hypothetical protein TERM 1544 1289055 - 1289025 - T 100 -16.2 -3.96148 | opp_overlap 1289029 1289031 1289032, overlap 1289032 TTCCTGCAGCACAAA CAAAAAACGCGCCC ATT GGGCGCGCTATTTG CCGGAGAACCGATCA TERM 1545 1289031 - 1289049 + T 75 -11.6 -3.34398 | opp_overlap 1289025 1289032, overlap 1289029 1289032 CAGCACAAACAAAAA ACGCGCCC ATT GGGCGCGC TATTTGCCGGAGAAC TERM 1546 1289048 - 1289032 - T 100 -15.1 -5.73978 | opp_overlap 1289032 1289031 1289029, overlap 1289025 AGCACAAACAAAAAA CGCGCCC ATT GGGCGCG CTATTTGCCGGAGAA TERM 1547 1289032 - 1289048 + T 83 -15.1 -2.60496 | opp_overlap 1289025 1289032, overlap 1289031 1289029 AGCACAAACAAAAAA CGCGCCC ATT GGGCGCG CTATTTGCCGGAGAA rpmG 1289243 - 1289076 - | 50S ribosomal protein L33 TERM 1548 1289114 - 1289130 + g 72 -10.9 -3.40163 | ATTCGACGTGCTTGC GTACGAC CGG GTCGTAC TTCGTCTTCGTCATC TERM 1549 1289288 - 1289266 - R 79 -7.8 -4.41348 | opp_overlap 1289271, overlap 1289272 CTGCCTTTAAACAAA TGAGAAGC CGCAGGC GCTTCTCA CCTCGGCTAAATCTG TERM 1550 1289328 - 1289300 - R 71 -9.5 -3.53811 | CTCACCTCGGCTAAA TCTGGCGCGAAAC TAC GTATCGCGCCCAA AAAGTCAAGCCTGTT Atu1300 1290508 - 1289333 - | MFS permease TERM 1551 1289888 - 1289862 - G 78 -10.8 -3.94853 | GAACCGAACACGAAA GCTGCAGCCGAT GCC ATCGGCACCAGC CAGACGTAACGGATG TERM 1552 1290071 - 1290100 + g 77 -3.5 -5.00616 | gap 1, opp_overlap 1290057, overlap 1290072 1290091 ACCGACCGCAAGGCC GGTGGCATAGATGC CGA GCACC-ATGCCGCG TTTTTTCGGCGGCGC Atu1301 1291203 - 1290517 - | hypothetical protein Atu1302 1291649 - 1291206 - | hypothetical protein rnr 1294046 - 1291692 - | exoribonuclease TERM 1553 1292498 - 1292520 + g 77 -3.4 -4.98531 | gap 1, overlap 1292502 GCGTCGGGGCGTCGT GCACGCGGT AGACCA GCCGC-TGC TTTTTCGTTTCCAGC TERM 1554 1293270 - 1293288 + g 80 -10.3 -4.07568 | opp_overlap 1293269 1293270 GCCATGCGCATAAAT GGCGATC ATCGA GATCGCC TTTTCCGAGGCGACC topA 1296721 - 1294043 - | DNA topoisomerase I TERM 1555 1295059 - 1295084 + g 78 -6.7 -4.66318 | CCTGCTTCCAGTCCA GCTCGCCGGCG GAAA TGCGGTCGAGC TTTTCTTCGAGTGCT TERM 1556 1295149 - 1295135 - G 76 -6.4 -4.57837 | ATATTTGGTGAAAAA GCTCTC CAG GAAAGC CGTCACCAGTCGTCC Atu1305 1298309 - 1297167 - | DNA processing chain A TERM 1557 1297665 - 1297625 - G 77 -11.8 -3.65351 | overlap 1297657 1297658 CGACGCCGAGCGAAA CGCCCGCGATCAACCG GTTGCGGCG CGGGAAATCGCGGGCG CGCGGTTCCCAGCCA Atu1306 1298939 - 1298331 - | putative glycerol-3-phosphate acyltransferase PlsY TERM 1558 1298679 - 1298665 - G 70 -4.9 -4.54343 | AGAAAGGCAAAGAAA CCCGC GACCA GCGAG GCCTCGTAACCCCAG TERM 1559 1298714 - 1298762 + g 74 -5.9 -4.45068 | opp_overlap 1298714 1298715, overlap 1298714 1298715 CATTGGCGACCAGAA C-CGCCGCCGTGCCCTTGAGTGC GTCGA GGAG-CAGGGTCGCGGCGGCGAG TTTCTTGTTGCCGGT pyrC 1300289 - 1298997 - | dihydroorotase pyrB 1301227 - 1300286 - | aspartate carbamoyltransferase catalytic subunit TERM 1560 1301089 - 1301108 + g 85 -7.1 -4.84359 | GGTTGATCTGCGTCA GGCCTCG CAGCGT CGAGGTC TTTTTCTCGCGCTGA Atu8153 1301889 - 1301458 - | hypothetical protein TERM 1561 1301946 - 1301934 - H 79 -3.3 -5.26875 | overlap 1301935 TGGCGAACCAAAAAA GCCTG TGG CAGGT TCCACATCAGGTGGT TERM 1562 1302852 - 1302822 - g 71 -6.8 -4.21194 | gap 1, overlap 1302825 GGGCATGACGGAAAA GCAGGGCGGCACG GATGTA CGTGCCAACC-GC ACCACGGCCGAGCGC TERM 1563 1303265 - 1303250 - g 70 -4.6 -4.57073 | overlap 1303251 CAGTGTTCGGAAAAA TGCTGG TCAG CCAGCC GATCATGACTCGCGT acd 1302247 - 1303899 + | acyl-CoA dehydrogenase Atu1311 1304040 - 1304651 + | acetyltransferase Atu1312 1304715 - 1305011 + | hypothetical protein Atu8154 1305008 - 1305382 + | plasmid stabilization system protein protein Atu1314 1305536 - 1306180 + | TetR family transcriptional regulator TERM 1564 1306248 - 1306271 + F 86 -9.5 -4.30978 | AATCAGCCATGTTTT CACCGGACG CGCAAC CGCCCGGTG TTTTCGTCCGTTCAC TERM 1565 1306450 - 1306462 + F 100 -7.7 -5.23316 | CTGGACAGCCTTGGG CGTCA TGA TGACG TTTTTTGCTATGCTG Atu8155 1306585 - 1306902 + | hypothetical protein Atu1316 1307333 - 1306854 - | hypothetical protein TERM 1566 1307001 - 1307032 + g 78 -2.1 -5.02074 | CGCGACGGTTGAAAG CCGCTCATCCC AGTAAATAAA GGGCAGGGCGG TTTTTTCGCCCATGG TERM 1567 1308204 - 1308249 + G 72 -13.3 -2.53263 | gap 1, opp_overlap 1308208 1308212 CCGACATGAAGCTCA TCAACGAACTGCACCA-GCCGG ATA TCGGCCTGGTGCCGATCGGTGA TCGCTTCACGATGGG Atu1317 1307339 - 1308439 + | metal-dependent hydrolase TERM 1568 1308604 - 1308592 - g 73 -10.5 -3.59979 | TCTCGCCACCGTAAA GCGCG TTG CGCGC CTTGCCCGTATCGCT gatC 1308566 - 1308853 + | glutamyl-tRNA-Gln-amidotransferase chain C TERM 1569 1309684 - 1309674 - g 77 -8.2 -4.30576 | overlap 1309676 GCCGGATTACGAAAA GGCC ATC GGCC AGTCGCTGAAGGGCC gatA 1308910 - 1310391 + | aspartyl/glutamyl-tRNA amidotransferase subunit A TERM 1570 1310413 - 1310449 + G 84 -10.1 -4.2828 | opp_overlap 1310417 1310421, overlap 1310417 1310421 TCAAGCTCAGAGACA TGAACGAAGCCGATCGC CAT GCGGTCGGCTTTGTCGG TTTTGCTGCCTGGCG TERM 1571 1310417 - 1310445 + G 84 -17.5 -2.78049 | opp_overlap 1310417 1310421, overlap 1310413 1310421 GCTCAGAGACATGAA CGAAGCCGATCGC CAT GCGGTCGGCTTTG TCGGTTTTGCTGCCT TERM 1572 1310445 - 1310417 - g 76 -13.1 -3.35197 | opp_overlap 1310413 1310417 1310421, overlap 1310421 GCTCAGAGACATGAA CGAAGCCGATCGC CAT GCGGTCGGCTTTG TCGGTTTTGCTGCCT TERM 1573 1310441 - 1310421 - g 79 -12.5 -3.4493 | opp_overlap 1310417 1310413 1310421, overlap 1310417 AGAGACATGAACGAA GCCGATCGC CAT GCGGTCGGC TTTGTCGGTTTTGCT TERM 1574 1310421 - 1310441 + G 95 -14.7 -4.06781 | opp_overlap 1310421 1310417, overlap 1310417 1310413 AGAGACATGAACGAA GCCGATCGC CAT GCGGTCGGC TTTGTCGGTTTTGCT Atu1320 1310412 - 1310879 + | acetyltransferase TERM 1575 1310942 - 1310912 - T 83 -12.4 -3.72576 | opp_overlap 1310911 1310929 1310941, overlap 1310913 CGCTGCGCGACGAAA TGCCGGGCGACAGC ATT GCCGCCGCCCGGTC GGCTTATCGATTGTC TERM 1576 1310941 - 1310913 - T 86 -15.9 -2.83403 | opp_overlap 1310911 1310929, overlap 1310912 GCTGCGCGACGAAAT GCCGGGCGACAGC ATT GCCGCCGCCCGGT CGGCTTATCGATTGT Atu1321 1311203 - 1310946 - | hypothetical protein TERM 1577 1311088 - 1311106 + g 70 -5.2 -4.54477 | opp_overlap 1311102, overlap 1311102 CCGAAAATCCAGCCA TCGCGCGT ATA AAGCGTGA TTTTCTCGATTTTGC Atu1322 1311479 - 1311988 + | acetyltransferase Atu1323 1312383 - 1311970 - | hypothetical protein TERM 1578 1312708 - 1312682 - g 73 -10.1 -3.58037 | gap 1 GAGGAATGCGTCAAA CAGGCCGTGCGC ACGG GC-CTCGGCCTG AAGGCGAAGATCAAC gatB 1312454 - 1313959 + | aspartyl/glutamyl-tRNA amidotransferase subunit B TERM 1579 1314121 - 1314139 + F 100 -8.8 -5.1523 | ACTGACATCACTTCT GCCGGG ATCAACG CCCGGC TTTTTCTATTCTGAG Atu1325 1314168 - 1314665 + | acetyltransferase Atu1326 1314662 - 1315135 + | acetyltransferase Atu1327 1315245 - 1315643 + | NADH dehydrogenase TERM 1580 1315655 - 1315680 + F 95 -14.8 -3.48924 | opp_overlap 1315648, overlap 1315649 1315648 1315646 CTGAATTATCGCGAT GCGCGGTGTT GTGCAA AACACCGCGC TTGTATCCGGCCTCA TERM 1581 1315687 - 1315699 + F 75 -6.2 -4.59853 | ACACCGCGCTTGTAT CCGG CCTCA CCGG TTTTTGCCACATTCC TERM 1582 1315895 - 1315885 - g 71 -8.2 -4.07568 | opp_overlap 1315883 1315885 CGCCCGTCTGGAAAA CCGC GTC GCGG TGTTTTCCGGCATCG Atu1328 1315775 - 1316212 + | hypothetical protein aat 1316840 - 1316226 - | leucyl/phenylalanyl-tRNA--protein transferase TERM 1583 1316833 - 1316784 - G 72 -12.3 -3.01924 | gap 2, opp_overlap 1316801 CAGGCCGGCGGAATA GGC-GCGCAGCAG-AATATCGAC CGTTAT GTCGTTGTTTCTGCTGCGCCGCC CAGCCATATCGTCTT accC 1318193 - 1316847 - | acetyl-CoA carboxylase biotin carboxylase subunit TERM 1584 1317415 - 1317433 + g 79 -8.8 -4.28018 | overlap 1317403 AGCTTGCGCATCGCG TCGGCGCA AAT TTCGCCGA TTTTCATGCGCTGTT accB 1318694 - 1318206 - | acetyl-CoA carboxylase biotin carboxyl carrier protein subunit aroQ 1319157 - 1318720 - | 3-dehydroquinate dehydratase TERM 1585 1319037 - 1319026 - G 71 -7.2 -4.20106 | AAATTCCACCGAAAA GCCG AGAT CGGC TCCGGCGTTCACACA TERM 1586 1319242 - 1319215 - R 79 -7.7 -4.41047 | opp_overlap 1319233 1319238, overlap 1319233 AGCCTTCAAGGAAAA GCCCCTGCA AGCCGTAAAG CGCAGGGGC TGCCCCTTATCTCAC Atu1333 1320050 - 1319283 - | outer membrane protein aspB 1320218 - 1321381 + | aspartate transaminase Atu1335 1322092 - 1321409 - | ArsR family transcriptional regulator Atu1336 1322167 - 1322493 + | hypothetical protein Atu1337 1322490 - 1322855 + | hypothetical protein TERM 1587 1322852 - 1322870 + F 72 -2.4 -4.87665 | overlap 1322842 GGGGAGCAGCTTGGG CTGATATT CCC AGCATCAG TTTTTCTGCATGCCG fabG 1322983 - 1323687 + | 3-oxoacyl-(acyl carrier protein) reductase TERM 1588 1323748 - 1323780 + T 100 -25.1 -4.23213 | opp_overlap 1323748 1323753, overlap 1323753 CCAGCATCGACAAAA CAAAACGCCCGCAAC GAT GTTGCGGGCGTTTTG TTTATTCCGTGTCAC TERM 1589 1323780 - 1323748 - T 100 -25.1 -4.43844 | opp_overlap 1323748 1323753, overlap 1323753 CCAGCATCGACAAAA CAAAACGCCCGCAAC GAT GTTGCGGGCGTTTTG TTTATTCCGTGTCAC TERM 1590 1323775 - 1323753 - T 100 -19.2 -5.19275 | opp_overlap 1323748 1323753, overlap 1323748 ATCGACAAAACAAAA CGCCCGCAAC GAT GTTGCGGGCG TTTTGTTTATTCCGT TERM 1591 1323753 - 1323775 + T 100 -19.2 -5.10665 | opp_overlap 1323753 1323748, overlap 1323748 ATCGACAAAACAAAA CGCCCGCAAC GAT GTTGCGGGCG TTTTGTTTATTCCGT rne 1326734 - 1323801 - | ribonuclease E TERM 1592 1324331 - 1324371 + g 77 -11.2 -3.62478 | gap 1, opp_overlap 1324303, overlap 1324315 1324346 1324348 GGCGACCGCCACGCT TGCCG-CGACGACGGCG CTTGCGCT TGCCGTCTTCGTCGGCA TTTGCAGCTTCATTC TERM 1593 1326201 - 1326228 + g 70 -3.2 -4.71426 | TGTCTTCTTCTTGGC GCGGGGGCGGCG AACG CGCTTCTTCGGC TTTTCTTCCTCAGCC Atu8016 1327134 - 1326994 - | hypothetical protein TERM 1594 1327806 - 1327793 - g 77 -3.7 -4.98531 | TGCCGAAACCAAAAA GGGCG ATGA CGGCC AGTCTTTCCGTTTCG amiA 1327380 - 1328639 + | N-acetylmuramoyl-L-alanine amidase TERM 1595 1328698 - 1328732 + F 74 -7.1 -4.28361 | overlap 1328701 AAAGCTGTTCAATTC TAAGGCTTGCGGTCG ATTAA CGACCCGAAGCCCTA TTTTACTCACATTCG TERM 1596 1329633 - 1329616 - g 89 -10.5 -4.56775 | overlap 1329620 ATCCGTCGCGAAAAA GCAGCGC TGGA GCGCCGC GACTGGGTGATCGAC TERM 1597 1330625 - 1330654 + G 79 -7.8 -4.45083 | opp_overlap 1330617 CGGAATATGCCGAAC GCTTCGGCATCT ACGACA AGATGCCGCCGC TTTTGTCCATGTCGC mrcA 1328956 - 1331403 + | penicillin-binding protein 1a TERM 1598 1331420 - 1331457 + F 100 -14.8 -4.44046 | overlap 1331422 ATCAGTCATGACGTT TGGCGGGGGCGCGGGT CTTTAC ATCCGCGCCCCCCGCA TTTATTTGAGCTACA TERM 1599 1331422 - 1331456 + F 100 -17.2 -3.25946 | gap 1, overlap 1331420 CAGTCATGACGTTTG GCGG-GGGCGCGGGT CTTTAC ATCCGCGCCCCCCGC ATTTATTTGAGCTAC TERM 1600 1331556 - 1331540 - f 71 -10.1 -3.56972 | opp_overlap 1331550 1331551, overlap 1331536 1331551 AGTCGATGAAATCAA GCAGGCC ATA AGCCTGC TGAGGAGGCATCTTT prfB 1331605 - 1332633 + | peptide chain release factor 2 TERM 1601 1332663 - 1332687 + F 100 -15.8 -4.8622 | opp_overlap 1332659 1332660 1332674 TCGATCGGAAATTTG CCCCTCGCAA ACCCG TTGCGAGGGG TTTTTCGTTGGAGGA Atu1343 1332708 - 1333178 + | hypothetical protein Atu1344 1333706 - 1333206 - | hypothetical protein Atu1345 1334499 - 1333726 - | inorganic polyphosphate/ATP-NAD kinase TERM 1602 1334543 - 1334516 - H 95 -14.8 -3.28712 | opp_overlap 1334514 CGCTTCCCTCGACAA CGGCGCAGACCG GAAC CGGTCCGCGCAG GATGCTGTAACCCGT TERM 1603 1335669 - 1335695 + G 72 -12.3 -3.06915 | gap 1, opp_overlap 1335661 1335660, overlap 1335685 ACGAAATCGCCCGCG CCCGCATCGGCG GCCA CGC-GGTGCGGG TTGCATCGGGTACGT Atu1346 1334804 - 1335721 + | phenazine antibiotic biosynthesis related protein Atu1347 1335943 - 1337892 + | TetM/TetO subfamily tetracycline resistance protein TERM 1604 1337890 - 1337924 + T 80 -4.2 -4.99134 | opp_overlap 1337890, overlap 1337884 CGTCGGAACGCAGAA TGACCACCGGGTAG ACGAATG CTACACGACGGTCA TTTTTCATTTCAGGT TERM 1605 1337946 - 1337978 + T 100 -19.9 -4.09108 | ATTTCAGGTTAGACG GGTGACGCGGAGGAG ATT CCCCTCCGCGTTACC TTTCTGTCAATTAAA Atu1348 1344332 - 1337985 - | hypothetical protein TERM 1606 1338604 - 1338645 + g 85 -18 -2.52676 | gap 1, overlap 1338584 1338616 ACCGGAGCGGCTGCC GCCGGCTGC-GGACGCGGC TCGAC GCGGCGTTCTGCGGCCGGC TGGGTTGCGGCGATG TERM 1607 1339326 - 1339352 + g 82 -12.2 -3.63569 | CTTGACGAGGCCGAC CGACAGGCTGCG AAG CGCATCCTGACG TTCTTCCAGCGTTCC TERM 1608 1341130 - 1341160 + g 79 -8.9 -4.25458 | AGCGTCGCGGCAAGG TCCGCCTGGCGCT GGTCA AGCGCGGTGCGGA TTTCTTCGTGCGATT TERM 1609 1342059 - 1342074 + g 73 -4.6 -4.64334 | GGCCGTGCGGCTATC GAGCGC CCCG GCGATC TTTTCTTCGGCGCTT TERM 1610 1343339 - 1343349 + g 78 -6.8 -4.67943 | overlap 1343346 CGGAGGAGTTCAGCG CCTG CAG CAGG TTTTCTGTCTTGGCG TERM 1611 1345038 - 1345064 + G 70 -10.8 -3.53012 | opp_overlap 1345037 ACCGTCTTAAGGGAT CGGCGCAGGC CGTTGGC GCCTCCGCCG TTTCCGCGGCCGCGG Atu1349 1344809 - 1345177 + | hypothetical protein TERM 1612 1345210 - 1345259 + F 84 -9.1 -4.24623 | gap 1, overlap 1345206 TTTGCCATTTTGCAA GGCCGGTTCAGCCTGTGTGTCCCG AAG CGGGTTGCCAAGGC-GGGTCGGCC TTTCTATGTGTTTAG fdx 1345307 - 1345627 + | ferrodoxin TERM 1613 1345688 - 1345658 - T 100 -15.4 -4.96848 | CCCCGCACAGAAAAA GCCCCGCTCACC TGGTAGT GGGGAGCGGGGC GAGGCGGGTACGCAG TERM 1614 1345870 - 1345894 + T 84 -12.9 -3.44284 | overlap 1345870 1345871 ATTCACGGGTGATAT CGGACATGACG TTA CGTCATGTCCC TGTTGTTCCTCGAGA TERM 1615 1345871 - 1345893 + T 89 -16.4 -2.66249 | overlap 1345870 1345870 TTCACGGGTGATATC GGACATGACG TTA CGTCATGTCC CTGTTGTTCCTCGAG TERM 1616 1345931 - 1345964 + T 76 -2.9 -5.00616 | gap 1, opp_overlap 1345931, overlap 1345938 1345942 AAGGGCTGCCAACAA CCGTCAGCGGC-GGGC CTG GCCCTGTTCCAGCCGG TTTTTTAACAGCCGG Atu1351 1346560 - 1345934 - | hypothetical protein TERM 1617 1346224 - 1346243 + g 81 -8.5 -4.62069 | overlap 1346223 1346222 AGATGAAGGCCAGTT CCGCCGT GGTGCG GCGGCGG TTTTTCCACTGCGGC TERM 1618 1346794 - 1346807 + G 76 -5.9 -4.62336 | GGCGGCCGTTATCTT GCCGT CGAT GCGGC TTTTTCCCATGCGCT folP 1346740 - 1347525 + | dihydropteroate synthase TERM 1619 1347521 - 1347502 - f 80 -9.2 -4.07568 | GCGGTTCTTGCAAAA GCGTCGGC AAAG GCCGATGC GTAGATCAACGAGTG TERM 1620 1347677 - 1347691 + G 91 -7.8 -4.7497 | CTCGAGCAGGAGGAG GTGCTG GGC CAGCGC TTTTTCGTCGATGCC folB 1347605 - 1347970 + | dihydroneopterin aldolase TERM 1621 1348476 - 1348454 - g 100 -14.9 -4.54727 | CCGCGCAAACGAAAA GCGGGAGTG GTGGA CACTCCCGC TCGGCGATGACTGAG folK 1347990 - 1348490 + | 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase Atu1355 1349065 - 1348505 - | hypothetical protein Atu1356 1350274 - 1349195 - | hypothetical protein TERM 1622 1350033 - 1350019 - G 71 -5.6 -4.42653 | overlap 1350028 AGGCGAGCGAGAAAA GGACAC CAA GCGCCC CGAGCCCCAGCTTGC TERM 1623 1350240 - 1350228 - G 73 -10.5 -3.57144 | opp_overlap 1350230 GTCTCGAGCGTGAAA GCCGC CGG GCGGC GTGTCTGCGGATCGT Atu1357 1351749 - 1350271 - | hypothetical protein TERM 1624 1351388 - 1351369 - G 76 -9.2 -4.07568 | opp_overlap 1351375 CTTGCCGGCCGAAAA CCACCGGC CCCA GCCGCTGG CGCTCTGATAATCGA TERM 1625 1351849 - 1351815 - R 74 -2.1 -5.00616 | opp_overlap 1351839 1351840 CGGCTGCCCAAAAAA GAAGC-GCTCCAGCGGA TTT TCGGC-AGCGCTGCTTC CCGGCGCCTTTGTTG Atu1358 1352387 - 1351878 - | hypothetical protein TERM 1626 1352536 - 1352547 + H 76 -3 -5.01546 | opp_overlap 1352536 AAGGATAAAAATTAG TCAT TTAG ATGA TTTTTGTGTCAGTTT dksA 1352657 - 1353076 + | dnaK deletion suppressor protein TERM 1627 1353103 - 1353159 + T 75 -3.7 -4.86731 | opp_overlap 1353119, overlap 1353119 CAACAGGCTAAAAAC AGCATCAATTGAAAAAGGGCACGGAAA TTG TTTCCGTGCCCTTTTTGGTGTCGTGAA TTTTGTTTCGGAAGA TERM 1628 1353119 - 1353143 + T 100 -18.7 -4.82667 | opp_overlap 1353119, overlap 1353103 GCATCAATTGAAAAA GGGCACGGAAA TTG TTTCCGTGCCC TTTTTGGTGTCGTGA TERM 1629 1353143 - 1353119 - T 100 -18.7 -4.7629 | opp_overlap 1353103 1353119 GCATCAATTGAAAAA GGGCACGGAAA TTG TTTCCGTGCCC TTTTTGGTGTCGTGA Atu1360 1354426 - 1353185 - | hypothetical protein Atu1361 1354907 - 1354491 - | hypothetical protein TERM 1630 1355786 - 1355835 + G 71 -7.9 -4.03234 | gap 1, opp_overlap 1355771 CGCCATCGATTACCT CGATCACGCCCCTGCCGGTT TCTTTTCCGCC AGCCG-CAAGGGCGAGATCG TTTATCTGAACGCCA Atu1362 1355121 - 1357706 + | two component sensor kinase clpS 1357979 - 1358332 + | ATP-dependent Clp protease adaptor protein ClpS clpA 1358343 - 1360853 + | ATP-dependent Clp protease, ATP-binding subunit TERM 1631 1360879 - 1360898 + F 100 -15 -4.29738 | opp_overlap 1360875, overlap 1360893 TGACCTATAGACGGA TGCCGGGC GAGA GCCCGGCA TTTTCATGCCTGTCC TERM 1632 1361354 - 1361330 - g 77 -11.3 -3.60818 | opp_overlap 1361330 1361334 GCAAAATCTTTCAAA GGTGCCGCGTG AAG CACGCGCCGCC TGGTTCGCCGGTTTC TERM 1633 1361330 - 1361354 + G 73 -13.5 -2.72855 | opp_overlap 1361330, overlap 1361334 GCAAAATCTTTCAAA GGTGCCGCGTG AAG CACGCGCCGCC TGGTTCGCCGGTTTC Atu8156 1360932 - 1361690 + | hypothetical protein TERM 1634 1362003 - 1362013 + G 73 -4.6 -4.61527 | CAATTGTGCTTCTAG CGGC TGG GCTG TTTTTGCGCGGTTTT Atu1366 1361690 - 1362031 + | hypothetical protein Atu1367 1362910 - 1362044 - | LysR family transcriptional regulator TERM 1635 1363205 - 1363217 + G 80 -3.3 -5.13473 | GCCGCACCTTCACTG TACCC AAG GGGCA TTTTTTCCGTATCGT Atu1368 1363021 - 1363872 + | hypothetical protein Atu1369 1364427 - 1363999 - | HIT family protein Atu1370 1365648 - 1364449 - | hypothetical protein TERM 1636 1365599 - 1365570 - G 90 -15.1 -3.54543 | opp_overlap 1365579, overlap 1365571 1365579 ACGTATTGCGCGAAA CTCCGGAAAGCTG GTTC CAGCTTTCCGGAT CGATATCCGTGAAGG TERM 1637 1365598 - 1365571 - G 86 -18.6 -2.72511 | opp_overlap 1365579, overlap 1365570 1365579 CGTATTGCGCGAAAC TCCGGAAAGCTG GTTC CAGCTTTCCGGA TCGATATCCGTGAAG Atu1371 1366364 - 1365645 - | glycerophosphoryl diester phosphodiesterase TERM 1638 1366237 - 1366217 - G 79 -8.9 -4.18018 | overlap 1366220 CGTGGTCATGGAAAA CCACCGGCA CGC TGTCGGCGG CCAGCTGCACGTCGC Atu1372 1366852 - 1366382 - | hypothetical protein Atu1373 1366969 - 1367811 + | hypothetical protein TERM 1639 1368547 - 1368533 - g 73 -10 -3.67775 | opp_overlap 1368525, overlap 1368517 ATCGCGATCGAAGAA GCCAAG CGT CTTGGC ATTCCGGTCGTTGCG rpsB 1368005 - 1368772 + | 30S ribosomal protein S2 TERM 1640 1369023 - 1369037 + F 77 -11.4 -3.55071 | AATGCGCATGCCCAT CCCGGA ACC TCCGGG TTTCAAAGGGTGTGC TERM 1641 1369959 - 1369944 - g 79 -9 -4.21768 | overlap 1369948 1369949 CAAGGAAGTCGAAAA GGAAGC CGGC GCTTCC ATCGAAGTGACGGGC TERM 1642 1370039 - 1370018 - g 70 -4.4 -4.45765 | overlap 1370014 TCGAAAAGGAAGAAA GCGATTTC GCGGCA GAAGTCGC AGCCGTCGCCAAGGG tsf 1369132 - 1370058 + | elongation factor Ts TERM 1643 1370074 - 1370128 + F 80 -10.7 -3.79481 | gap 1, opp_overlap 1370064 1370084 1370085 1370105, overlap 1370089 1370119 TTATATTTACCCAAT CTTGGGAAAACGGGAGGGCATCGCGT GACA ACGCGGTGCCCTT-CGTGTATCCGCG TTTCGGTTACATTTC TERM 1644 1370118 - 1370084 - f 86 -10.7 -4.09739 | gap 1, opp_overlap 1370074 1370089, overlap 1370085 1370105 CCAATCTTGGGAAAA CGGGAGGGCATCGCGT GACA ACGCGGTGCCCTTC-G TGTATCCGCGTTTCG TERM 1645 1370089 - 1370114 + F 100 -16.9 -3.322 | opp_overlap 1370084 1370085 1370105, overlap 1370074 CTTGGGAAAACGGGA GGGCATCGCGT GACA ACGCGGTGCCC TTCGTGTATCCGCGT TERM 1646 1370518 - 1370546 + G 79 -8.1 -4.56597 | overlap 1370507 GCAGCGCGCTGCCCT TCACCATCTGGCC CAG GGTCGCGTGGTGA TTTTTGCCGGCGGCA pyrH 1370156 - 1370878 + | uridylate kinase TERM 1647 1371334 - 1371320 - g 81 -5.6 -4.77757 | overlap 1371321 TCCGAAAAAGCAAAA GTGGCG ATT CGCCAT GTGCGCCGGGACGGC TERM 1648 1371382 - 1371368 - g 81 -4.2 -5.0133 | GACGGCCTGAAAAAA GCCG AAAAAGA CGGC GATATCGGTCAGGAC rrf 1370945 - 1371502 + | ribosome recycling factor uppS 1371567 - 1372310 + | undecaprenyl pyrophosphate synthase TERM 1649 1372354 - 1372378 + G 72 -13.5 -2.66812 | overlap 1372350 1372338 GTCCGCAATCGTCAT GGCCGCGGTCA TTC TGGCCGCGACC TGGTATGGTGGCATT TERM 1650 1373027 - 1373042 + G 79 -9 -4.20148 | CATGGCGGCTTCATG GACCGT GTTG ACGGTC TTGTTTTCGCCTGCT cdsA 1372310 - 1373143 + | phosphatidate cytidylyltransferase Atu1380 1373181 - 1374314 + | zinc metallopeptidase omp1 1374514 - 1376838 + | group 1 outer membrane protein precursor TERM 1651 1376906 - 1376963 + G 85 -17.1 -2.94099 | overlap 1376921 GAATACAACGCATTT TTTCCGCCCCACGAGGGACTGCGAT TGAAAGAT ATCGCAGACCTTTTTGGGGCGGAAC TGTCTGATGACGCGG TERM 1652 1376921 - 1376948 + G 76 -7 -4.56597 | overlap 1376906 TTTCCGCCCCACGAG GGACTGCGAT TGAAAGAT ATCGCAGACC TTTTTGGGGCGGAAC lpxD 1376888 - 1377955 + | UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase fabZ 1377948 - 1378412 + | (3R)-hydroxymyristoyl-ACP dehydratase lpxA 1378412 - 1379227 + | UDP-N-acetylglucosamine acyltransferase TERM 1653 1379263 - 1379281 + F 76 -11.7 -3.01726 | overlap 1379268 TCTCGCCATCGTGGC CGGCAGC GGCCA GCTGCCG CTTTATGTGGCGGCG TERM 1654 1379268 - 1379282 + F 74 -8.5 -4.03234 | overlap 1379263 CCATCGTGGCCGGCA GCGGC CAGCT GCCGC TTTATGTGGCGGCGG Atu1385 1379309 - 1380112 + | hypothetical protein lpxB 1380109 - 1381293 + | lipid-A-disaccharide synthase Atu1387 1381486 - 1382196 + | GntR family transcriptional regulator Atu1388 1382203 - 1382988 + | ABC transporter, substrate binding protein (amino acid) TERM 1655 1383003 - 1383041 + F 90 -12.4 -3.96148 | gap 1, opp_overlap 1383002 1383003 ACCAACCTGGCAAAT CCATGCGCTGG-CCGTG TCTGAT CCCGGCCCGGCGCGTGG TTTGTCCTCCCCGAA Atu1389 1383069 - 1383740 + | ABC transporter, membrane spanning protein TERM 1656 1384171 - 1384183 + G 74 -3.3 -4.73388 | overlap 1384172 GCGGGTGGCCATTCC GCCGA CCG TCGGG TTTTTCGTACAGGTT Atu1390 1383737 - 1384396 + | ABC transporter, membrane spanning protein Atu1391 1384374 - 1385108 + | ABC transporter, nucleotide binding/ATPase protein TERM 1657 1385162 - 1385137 - T 100 -16.1 -5.07486 | opp_overlap 1385137 GACGCCCAACAAAAA GGCCGGCGGGT GAAA ACCTGCCGGCC TTTGATCTTACAGGG TERM 1658 1385137 - 1385162 + T 100 -18.3 -3.92324 | opp_overlap 1385137 GACGCCCAACAAAAA GGCCGGCGGGT GAAA ACCTGCCGGCC TTTGATCTTACAGGG cisY 1386476 - 1385187 - | type II citrate synthase TERM 1659 1386785 - 1386759 - H 83 -7.3 -4.66833 | overlap 1386762 1386781 1386784 GGTCAAGGGGAAAAA CAGCATTTCGG GTATG CCGAAACGATG CAGGGCGGATTGCCC Atu1393 1386783 - 1389212 + | hypothetical protein Atu1394 1389909 - 1389232 - | glutathione S-transferase TERM 1660 1389510 - 1389523 + g 71 -8.1 -4.03234 | GGCCTTCACTCCACA GCGCA TCGA TGCGC TTTATATCGGCCGCA TERM 1661 1390096 - 1390068 - R 100 -10.4 -4.99645 | gap 1, opp_overlap 1390068 1390067 ATCTCACAAAGAAAA GGCGCATCAATTC AACG GAAC-GATGCGCC ATTCATTTCGAAAGC lexA 1390892 - 1390170 - | LexA repressor TERM 1662 1390659 - 1390647 - G 80 -10.5 -4.07885 | GACGCTCGGCGAAAA GCCGC GTT GCGGC CTTGCGCCCGGCGTA TERM 1663 1390757 - 1390737 - G 95 -12.5 -4.1552 | overlap 1390738 TAGCCGGCGAATAAA CCCGCGCTC TTC GAGCGCGGT GATCAGCCGGTGGAT TERM 1664 1390756 - 1390738 - G 83 -16 -3.08991 | overlap 1390737 AGCCGGCGAATAAAC CCGCGCTC TTC GAGCGCGG TGATCAGCCGGTGGA TERM 1665 1391164 - 1391199 + r 100 -14.8 -4.68103 | opp_overlap 1391171 CGGCCTGAACGCGCC GAAGCAACGCAGAGTG ATGG CCCTCTCCGTTGCTTC TTTTATTCGCCTTGA Atu1396 1392006 - 1391275 - | ABC transporter, nucleotide binding/ATPase protein Atu1397 1392640 - 1391987 - | ABC transporter, membrane spanning protein (amino acid) TERM 1666 1392631 - 1392617 - G 72 -2.1 -4.74518 | AAGCAGGAAAAGAAA TTCAG GCCAA CCGAA TGTGGACATCAGGCA Atu1398 1393344 - 1392640 - | ABC transporter, membrane spanning protein (amino acid) TERM 1667 1393368 - 1393399 + r 100 -17.3 -4.14243 | opp_overlap 1393363, overlap 1393369 CTCCCGAATACGCTG TTCCGGCGCGCCT GTGGAA GGGCGCGCCGGAG TTTTGCCGTCCGATC TERM 1668 1393369 - 1393398 + r 100 -18.6 -3.08224 | opp_overlap 1393363, overlap 1393368 TCCCGAATACGCTGT TCCGGCGCGCCT GTGGAA GGGCGCGCCGGA GTTTTGCCGTCCGAT Atu1399 1394216 - 1393413 - | ABC transporter, substrate binding protein (amino acid) TERM 1669 1394164 - 1394149 - G 74 -6.1 -4.57569 | GCATTTGCCGAAAAA CCGGT GAAGAT ACCGG CACAAACCGCGATCG serA 1395268 - 1394282 - | phosphoglycerate dehydrogenase TERM 1670 1394556 - 1394572 + g 72 -13.7 -2.52516 | opp_overlap 1394539, overlap 1394555 GCCTGCTCGTCTATG GTCGGGC CGC GCCCGAC ATTGATGATGACGGC Atu1401 1396496 - 1395345 - | ABC transporter, nucleotide binding/ATPase protein TERM 1671 1395681 - 1395702 + g 75 -2.3 -4.87665 | gap 1 GCGGATGGAGGTGGA GCC-GATG AAGAGGC CATCAGGC TTTTTGTCAGTGACG TERM 1672 1395817 - 1395832 + g 78 -4.6 -4.84359 | TGCTGGATGATGCCT TCGCGC ATCA GGGCGA TTTTTGTGCCCATGG TERM 1673 1396076 - 1396103 + g 84 -9.3 -4.56775 | gap 1, overlap 1396099 CGAGCATCTCCGTCA GTC-CGAGGATT TTTGC AATCCTCGCGAC TTTTTCAACGACGCT Atu1402 1397342 - 1396509 - | ABC transporter, membrane spanning protein Atu1403 1398256 - 1397339 - | ABC transporter, membrane spanning protein TERM 1674 1398223 - 1398250 + g 71 -9 -3.76402 | opp_overlap 1398207 1398204 1398205 TCAACGGATGACCGT CGAGCCTTGCTC CTGC GAGCTGGGCACG TTTCATAACTGACCT Atu1404 1399538 - 1398321 - | ABC transporter, substrate binding protein (sugar) TERM 1675 1399543 - 1399556 + r 91 -3.8 -5.4505 | ATATTGCTCATCCAT GCTC CTCCCT GAGC TTTTTTATTGGCGCC Atu1405 1400417 - 1399662 - | GntR family transcriptional regulator TERM 1676 1401085 - 1401072 - g 71 -8.1 -4.08767 | CGCACTTGCCGAAAA CCTGC TGGA GCAGG GCATTTCGGCCATGA Atu1406 1400578 - 1401780 + | isomerase/lactonizing enzyme Atu1407 1401791 - 1402561 + | gluconate dehydrogenase TERM 1677 1403327 - 1403313 - g 76 -5.6 -4.62783 | opp_overlap 1403313 1403315, overlap 1403315 TACCGATTTGAAAAA GGCGTC TTC GACGTC CTGTTCGAAGCCTCC gutB 1402611 - 1403654 + | sorbitol dehydrogenase allA 1403654 - 1404142 + | ureidoglycolate hydrolase Atu1410 1405015 - 1404293 - | ABC transporter, nucleotide binding/ATPase protein Atu1411 1406784 - 1405012 - | ABC transporter, nucleotide binding/ATPase protein TERM 1678 1405192 - 1405212 + g 85 -9.7 -4.59773 | TGCCCGCAGTTTCTT CAGGAGATC GGC GAGCTCCTG TTTTTCGCCGTGGCG TERM 1679 1406759 - 1406745 - G 77 -3.4 -4.91109 | overlap 1406746 TGGCGACGAGAAAAA GCGCAG CTA CCGCGG GATAAAGATGTTTAC Atu1412 1407820 - 1406786 - | ABC transporter, membrane spanning protein TERM 1680 1406900 - 1406885 - G 83 -4.6 -5.14563 | overlap 1406886 1406888 1406895 GTCGCTAGCAAAAAA GGAGGC GAAA GCCTCG ATGAGTCCAACGCCC TERM 1681 1407907 - 1407957 + r 72 -3.9 -4.73677 | gap 2, overlap 1407917 CTCGCCGGGTCTGCG GCTGCGCGTTCGAGCCGGGAGCAGG CTC CCGGC-C-CGTCTTGAATGGGGAGC TTTATTTATTGTCCG TERM 1682 1407917 - 1407942 + r 93 -16.1 -3.08679 | overlap 1407907 CTGCGGCTGCGCGTT CGAGCCGGGAG CAGG CTCCCGGCCCG TCTTGAATGGGGAGC Atu1413 1409107 - 1407959 - | ABC transporter, substrate binding protein (branched chain amino acid) TERM 1683 1408127 - 1408145 + g 76 -6.6 -4.56597 | overlap 1408124 1408116 1408118 GGCGGCGCGGAATTC GGCAGTGC CGG GCTTTGCC TTTTTCAACGCCACC acd 1410738 - 1409176 - | acyl-CoA dehydrogenase Atu1415 1411546 - 1410773 - | 3-hydroxyacyl-CoA dehydrogenase type II TERM 1684 1411497 - 1411447 - G 70 -3.8 -4.59773 | opp_overlap 1411494 1411495, overlap 1411448 1411449 CGTTACGGTCAAAAA TGGTGACCGCCGCGCCGCGA GCCGCGAGCAT TCGCGCCACGGCCGCCCCGA GGCCGGATGCCGCAC Atu1416 1413378 - 1411543 - | feruloyl-CoA synthase TERM 1685 1412043 - 1412020 - G 93 -8.1 -4.90778 | gap 1, overlap 1412021 1412022 GCCATCGAAATAAAA GCCGCGG-CG CGGAT CGTCCGCGAC GGCAAATTTGACGGT TERM 1686 1412293 - 1412260 - G 74 -11.6 -3.43961 | overlap 1412253 1412254 GCAGAACAGCGAGAA GGGTGCCGTCTCCG TCGAGC CGAGGCCGGCACCC ATGAGAACCGCATGG TERM 1687 1412416 - 1412404 - G 84 -5.5 -5.0133 | CAGGTCGCGAAAAAA GCTGC GGC ACAGC GCCTCGTCCTTGCGC TERM 1688 1412981 - 1412952 - G 70 -4.9 -4.57073 | opp_overlap 1412971, overlap 1412953 CATCCTCGGCAAAAA CCATCCCCGGG GTGATCTG CCCGCGGATGT CGGCGAGTTTGGTGA TERM 1689 1413472 - 1413442 - H 90 -4.8 -5.40072 | overlap 1413445 CTTTTGTCAAAAAAA TGATTACAAGAAAA TAA TATCCTTGTAAACA AAATGCGGAAGATAG TERM 1690 1413789 - 1413760 - g 72 -12.2 -3.06679 | gap 2, opp_overlap 1413760 1413759 1413757, overlap 1413749 AAGACGCCGATCGAA GGCGTG-C-GCGGC TCCC GCCGCTGGCACGCC GTGTTCTCGCAGATC TERM 1691 1414292 - 1414282 - g 79 -8.2 -4.56597 | overlap 1414258 1414283 GCCTTTCTTGAAAAA CGCG CTA CGCG GCTGAAAGCACCGGA fad 1413523 - 1414320 + | enoyl-CoA hydratase TERM 1692 1414377 - 1414350 - T 91 -14.3 -3.03243 | AGCCATCTCGCAATA TCGCCTGAGAA TAAGCT TTCTCAGGCGA CATTGGCCAGCGTCC metF 1415290 - 1414370 - | methylenetetrahydrofolate reductase TERM 1693 1414939 - 1414926 - G 70 -3.7 -4.60041 | opp_overlap 1414926, overlap 1414928 ATCGAGCTCGAAAAA CTGCC AGCG GGCTG TTTCTGGCCGCCACC TERM 1694 1415786 - 1415801 + G 74 -6.8 -4.30719 | overlap 1415757 1415794 AGGTTTGCTTAATCG TCTGCC GGGC GGCGGA TTTGTTGTGCGCCGC TERM 1695 1415794 - 1415816 + G 71 -6.9 -4.20136 | overlap 1415757 1415786 TTAATCGTCTGCCGG GCGGCGGAT TTGTT GTGCGCCGC TTTGGTTTTGCGGAT Atu1419 1415598 - 1416332 + | GntR family transcriptional regulator TERM 1696 1416359 - 1416380 + F 100 -15.1 -4.96501 | opp_overlap 1416357 1416354 CGCTGCAAATCCAGG GGTGGCGCC TTTT GGCGCCGCC TTTATTTTTGTCGAC gcvT 1416488 - 1417903 + | glycine cleavage system T protein, aminomethyltransferase TERM 1697 1417989 - 1417962 - T 100 -11.2 -5.86965 | opp_overlap 1417965, overlap 1417965 AGCGATCAAAAAAAA CAAGGCCCGCCG GAAC CGGTGGGCCTTT GCTATTGTGAAAAGC TERM 1698 1417986 - 1417965 - T 100 -12.9 -4.99643 | opp_overlap 1417965, overlap 1417962 GATCAAAAAAAACAA GGCCCGCCG GAAC CGGTGGGCC TTTGCTATTGTGAAA TERM 1699 1417965 - 1417986 + T 100 -15.1 -3.97088 | opp_overlap 1417962 1417965 GATCAAAAAAAACAA GGCCCGCCG GAAC CGGTGGGCC TTTGCTATTGTGAAA TERM 1700 1418075 - 1418055 - T 100 -11.8 -5.00616 | opp_overlap 1418055 GTTTCTTTCAAAAAA GCCCCGGC TCGAC GCCGAGGC TTTAATCTCTGCTTT TERM 1701 1418055 - 1418075 + T 76 -9.6 -3.9163 | opp_overlap 1418055 GTTTCTTTCAAAAAA GCCCCGGC TCGAC GCCGAGGC TTTAATCTCTGCTTT Atu1421 1418977 - 1418102 - | hypothetical protein TERM 1702 1418705 - 1418723 + g 70 -10.2 -3.43546 | overlap 1418694 1418703 GATATCGCTGTTCTC GGCGGCGA TCT TCGCCACC TCTTCATTTTCGTAA Atu1422 1419422 - 1418967 - | MarR family transcriptional regulator TERM 1703 1420051 - 1420078 + G 75 -2.7 -4.87318 | gap 2, overlap 1420052 1420054 GATCACGAACGGTTC G-TCG-CGGCGGG CCTG TCCGCCGGTGATC TTTTTGAGTTTTCGC TERM 1704 1420416 - 1420401 - g 75 -8.2 -4.20531 | CAGATTGACCGAAAA GCCGGC CGTC GCCGAC CTTGACCTGAATACT Atu1423 1419730 - 1420608 + | hypothetical protein TERM 1705 1421060 - 1421046 - g 85 -5.6 -5.10029 | overlap 1421047 ATCAACGTCAAAAAA GGCCAG TTC CTGGCG CCCTGGGACATGAAG kdsA 1420608 - 1421453 + | 2-dehydro-3-deoxyphosphooctonate aldolase TERM 1706 1422174 - 1422163 - g 73 -4.4 -4.62085 | ACGCTGAAAAAAGAA CTGT CCGC ACAG GGCCACAACACCAAT eno 1421590 - 1422864 + | enolase TERM 1707 1422851 - 1422874 + F 73 -6 -4.37886 | gap 1 ACGCCGGCCGTTCGA TCCTGCGCGGG TAA TTCGC-CAGGA TTTTGTGGGAGGTCG Atu1427 1422877 - 1423056 + | hypothetical protein TERM 1708 1423057 - 1423074 + F 100 -14.1 -4.72986 | CCATCGCCACCCTAA GCCCGCC CTCC GGCGGGC TTTTTCATGCCGATC TERM 1709 1423213 - 1423203 - g 95 -2.4 -5.69473 | GACATCATAAAAAAA GACG ATT CGGC CGTTTGATCGTTCCG Atu1428 1423178 - 1423495 + | hypothetical protein TERM 1710 1423687 - 1423664 - f 77 -8 -4.07687 | overlap 1423667 ATGGCGCCGCGAAAA CCAGCGACCG TATC CGGCCGCAAG ACAACGGCAAAGGCT pdhA 1423772 - 1424692 + | pyruvate dehydrogenase alpha subunit TERM 1711 1424805 - 1424784 - g 78 -7.3 -4.60924 | gap 1, opp_overlap 1424796, overlap 1424785 1424788 1424796 1424797 CAAATGGCTTAAAAA GGAAGGCGAC AAG GTCACC-TCC GGCGACGTGATTGCC TERM 1712 1425243 - 1425220 - g 70 -3.8 -4.72272 | overlap 1425222 CGCGCCGACGAAAAA GTCTTCGTCA TGGG TGAAGAAGTC GCCGAATATCAGGGC pdhB 1424710 - 1426131 + | pyruvate dehydrogenase subunit beta Atu1431 1426138 - 1426428 + | hypothetical protein TERM 1713 1426523 - 1426509 - f 75 -11.4 -3.33696 | overlap 1426517 1426518 TGGCTGGTCAAGGAA GGCGAC AAG GTCGCC CCCGGTGACGTGATC TERM 1714 1427486 - 1427447 - g 70 -3.4 -4.6971 | overlap 1427449 1427477 CAAAGCGGAAGAAAA GTCGCTCTCCACCATCTC CAAC GAGATGAAGGACTACGGC AAGCGCGCGAAAGAG aceF 1426572 - 1427789 + | branched-chain alpha-keto acid dehydrogenase subunit E2 Atu1433 1427802 - 1428446 + | arylesterase TERM 1715 1429325 - 1429313 - g 71 -9.1 -3.7941 | GACGTTGGAGAAGAA GGACG GTT CGTCC GAGAAGATCATCGCT lpdA 1428507 - 1429952 + | dihydrolipoamide dehydrogenase Atu1435 1430050 - 1430298 + | hypothetical protein lipA 1430402 - 1431373 + | lipoyl synthase Atu1437 1432503 - 1431571 - | hypothetical protein TERM 1716 1432620 - 1432634 + r 71 -10 -3.57971 | GTTTTCAAAGGGTTG TCCGCT TAT AGCGGA TTTGAGGGTGGGTGT Atu1438 1433600 - 1432866 - | AraC family transcriptional regulator TERM 1717 1433652 - 1433630 - R 79 -7.6 -4.42062 | opp_overlap 1433620, overlap 1433631 CAGTGTGCAAAGAAA TGGCCGCCTC GAA AAAGCGGCCG GATTCATTGCATGAT TERM 1718 1433651 - 1433631 - R 74 -11.1 -3.24755 | opp_overlap 1433620, overlap 1433630 AGTGTGCAAAGAAAT GGCCGCCTC GAA AAAGCGGCC GGATTCATTGCATGA Atu1439 1434004 - 1433729 - | hypothetical protein TERM 1719 1433756 - 1433783 + g 78 -9.8 -3.92996 | opp_overlap 1433723 CTTGACGGTCGATTC GCCGCGTTTGCG CTTT CGCAAAACCGGC TTGTTCTCTCTCGCC TERM 1720 1434388 - 1434426 + G 71 -8.8 -3.84451 | opp_overlap 1434388, overlap 1434389 1434393 1434424 CGTCGTCACTGAAGA CCGATGGTTGATGGATGG CAG CAATCCATCATCCTTCGA TTTGCGTTTGCCAAG TERM 1721 1434389 - 1434425 + G 70 -12.3 -2.90349 | opp_overlap 1434388, overlap 1434388 1434393 1434424 GTCGTCACTGAAGAC CGATGGTTGATGGATGG CAG CAATCCATCATCCTTCG ATTTGCGTTTGCCAA Atu1440 1434155 - 1434724 + | hypothetical protein Atu1441 1434734 - 1435189 + | hypothetical protein cinA 1435680 - 1435171 - | competence/damage-inducible protein CinA TERM 1722 1435538 - 1435520 - G 74 -6.6 -4.41548 | GTATAGGTGACAAAA CCACGGTC GAC GACGGCGG AGGAACCGGCAATCT ispF 1436864 - 1435677 - | bifunctional 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase/2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase protein TERM 1723 1437671 - 1437640 - g 70 -10.8 -3.54459 | gap 1, overlap 1437622 1437620 1437641 TCAACGCGCCGGAAA TTGCCCGCCGTGCCG AGG CGGCA-GGCGTGCAG CTCATCACCATTCAT TERM 1724 1437670 - 1437641 - g 77 -14.3 -2.72461 | gap 1, overlap 1437622 1437620 1437640 CAACGCGCCGGAAAT TGCCCGCCGTGCCG AGG CGGCA-GGCGTGCA GCTCATCACCATTCA nifR 1437141 - 1438157 + | nitrogen regulation protein ntrB 1438154 - 1439302 + | two component sensor kinase ntrC 1439299 - 1440750 + | two component response regulator TERM 1725 1441187 - 1441214 + G 74 -5.7 -4.43844 | gap 2 AAGGGCAGGGCGGCG GCACGACTGCATG TTCG CAT-C-GTCGTGC TTTTCTCCATCGTCG ntrY 1440899 - 1443160 + | two component sensor kinase ntrX 1443150 - 1444514 + | two component response regulator trkA 1444563 - 1445939 + | potassium transporter peripheral membrane component TERM 1726 1446171 - 1446196 + G 71 -5.5 -4.30576 | gap 1 CTTCCTCAATACCGT TCGTAAGCAGAA GAT TTC-GCTCACGA TTTTCCTGATCAACG hfq 1446124 - 1446366 + | RNA-binding protein Hfq TERM 1727 1446585 - 1446561 - f 78 -5.7 -4.77036 | opp_overlap 1446561 1446563, overlap 1446563 CCGGAGCAGGAAAAA CG-CCGCGACG ACATG CG-CGCGGTCG TTCTTGTACCCTTCC hflx 1446573 - 1447907 + | GTP-binding protein HFLX mazG 1448948 - 1448103 - | nucleoside triphosphate pyrophosphohydrolase Atu1453 1449611 - 1449024 - | hypothetical protein TERM 1728 1449737 - 1449764 + H 76 -5.5 -4.72007 | AAGGATTCCAAAGCT CCGCCAAGGCT CGAAAA ATCCTTGCCGG TTTGTTTTCCTCCAA TERM 1729 1450222 - 1450204 - g 78 -6.7 -4.71426 | gap 1 CGCGCACGAAGAAAA TCC-CCGC CAAT GCGGTGGA TCAGCCCGAATTCTG cysG 1449873 - 1451336 + | siroheme synthase Atu1455 1451329 - 1451643 + | hypothetical protein cysI 1451652 - 1453322 + | sulfite reductase (NADPH) hemoprotein beta-component Atu1457 1453333 - 1453839 + | hypothetical protein TERM 1730 1454634 - 1454618 - g 75 -8 -4.18494 | CACGCTGATCGAAAA CGGCAA GCTGT TTGCCG ATCTCGGTGTGCCGG mvrA 1453986 - 1454798 + | ferredoxin NADP+ reductase TERM 1731 1454824 - 1454841 + T 100 -12.7 -5.27335 | opp_overlap 1454820, overlap 1454801 GACTACAAGATTTCA GGAGGCC GTCA GGCCTCC TTTTTGTTTGCGCAC Atu1459 1456146 - 1454869 - | MFS permease TERM 1732 1456015 - 1456003 - G 78 -10.5 -3.93984 | AAATGCATCCAGAAA CGGCC CGA GGCCG TCACGGGCATCGGCG TERM 1733 1456085 - 1456062 - G 70 -3.1 -4.66833 | gap 1 CTGCAAGGGCAAAAA GCGTGCGG TCTGAGATG CCGC-CGC TGCGCGGCAATCCAC Atu1460 1456344 - 1456847 + | hypothetical protein Atu1461 1457686 - 1456877 - | hypothetical protein TERM 1734 1457808 - 1457789 - R 100 -15 -4.86621 | opp_overlap 1457789 ATCCGTAACGAAAAA GGCCCGGA TCGC TCCGGGCC TTTGCATGTTGGTTT TERM 1735 1457789 - 1457808 + r 100 -15 -3.79505 | opp_overlap 1457789 ATCCGTAACGAAAAA GGCCCGGA TCGC TCCGGGCC TTTGCATGTTGGTTT gcvP 1460699 - 1457835 - | glycine dehydrogenase TERM 1736 1458255 - 1458312 + g 81 -14.2 -3.29144 | gap 1, overlap 1458256 CGTCACGCCGCAGCT ATCCGCGAGCGGTCGTGTGTCG-ATGA TGCAC TCATGCGCCACGCGACCGGTCTCGGAC TTGTAGAGCACGTCG TERM 1737 1458256 - 1458311 + g 85 -17.7 -2.57344 | gap 1, overlap 1458255 GTCACGCCGCAGCTA TCCGCGAGCGGTCGTGTGTCG-ATGA TGCAC TCATGCGCCACGCGACCGGTCTCGGA CTTGTAGAGCACGTC gcvH 1461061 - 1460699 - | glycine cleavage system protein H gcvT 1462163 - 1461090 - | glycine cleavage system aminomethyltransferase T TERM 1738 1461903 - 1461878 - G 87 -10.5 -4.32034 | TGACGACGACGAAAA GATGATCGCCA CGAT TGGTGATCATC AGATCGTCGAGAATG TERM 1739 1462830 - 1462852 + G 78 -10.4 -3.98236 | ACTTCACCGCGTTTG GCGGCGAGCG CGG CACCCGCCGC TTTCTGCTGGGCTTT TERM 1740 1462966 - 1462920 - g 71 -5.9 -4.4078 | gap 2, opp_overlap 1462925 GCTTTGCAAGGAAAA TGCCGCGTCGCGTCGATCGTTCC CTT GCAACGATCAA-GCCT-GCGGCA AAATTCCCCTTTGAA Atu1466 1462627 - 1462980 + | hypothetical protein Atu1467 1463055 - 1463435 + | hypothetical protein Atu1468 1463522 - 1464496 + | hypothetical protein TERM 1741 1464541 - 1464508 - T 100 -13.9 -5.10461 | gap 1 TTGACGGAAGAAAAA CGGCTACCGGAACGCG TGA CAGG-TCCGGTAGCCG CAAGATGTCTCACAC TERM 1742 1464680 - 1464651 - T 74 -4.9 -4.7878 | opp_overlap 1464651 TATCTAGAAAATAAA GCTGACACCAG ACTGAACG CGGGTGTCGGC TTTGCAAGCATGGAA TERM 1743 1464732 - 1464746 + T 78 -5.8 -4.69622 | ATCTATATATCGCTT TGATAT AGA ATATCA TTTTTGGACTTCTGT Atu1469 1465039 - 1464719 - | hypothetical protein TERM 1744 1465149 - 1465175 + H 74 -8.6 -3.98282 | opp_overlap 1465151, overlap 1465151 TTTAATGGATGAAGG CACCCGGCGAAG GGG TTTCGCCGGCGG TTTCCTTGGTCTAGA TERM 1745 1465526 - 1465537 + G 71 -7.2 -4.23892 | GAGCGTGGTGCACTC GGCC TTTC GGCC TTTTACATCCTTGCA crcB 1465238 - 1465615 + | camphor resistance protein rluC 1465682 - 1466671 + | ribosomal large subunit pseudouridine synthase C Atu1472 1466678 - 1467346 + | hydrolase Atu1473 1467377 - 1468171 + | hypothetical protein Atu1474 1468232 - 1468720 + | hypothetical protein Atu1475 1468954 - 1469343 + | hypothetical protein TERM 1746 1469357 - 1469392 + T 82 -11 -3.87869 | gap 1, opp_overlap 1469363, overlap 1469361 GACGCCGGATCAAGA CGGAAACGGCGGCGCTC ACA GGGCGCCGCCGGC-CTG TTTCTCCAGCCTTAG TERM 1747 1469361 - 1469389 + T 79 -13.7 -2.71125 | opp_overlap 1469363, overlap 1469357 CCGGATCAAGACGGA AACGGCGGCGCTC ACA GGGCGCCGCCGGC CTGTTTCTCCAGCCT TERM 1748 1469387 - 1469363 - T 100 -18.5 -3.77831 | opp_overlap 1469361 1469357 GGATCAAGACGGAAA CGGCGGCGCTC ACA GGGCGCCGCCG GCCTGTTTCTCCAGC Atu1476 1470237 - 1469404 - | esterase D Atu1477 1470955 - 1470266 - | hypothetical protein Atu1478 1471391 - 1470981 - | hypothetical protein Atu8157 1471602 - 1472054 + | hypothetical protein TERM 1749 1472067 - 1472094 + T 100 -11.2 -4.8622 | overlap 1472069 TGAGAAGTGCGATGA CTGGGGCGATGA TAGT TCACCGCCCCCG TTTTTCGTTAGCAGC TERM 1750 1472069 - 1472092 + T 72 -12.4 -2.70268 | overlap 1472067 AGAAGTGCGATGACT GGGGCGATGA TAGT TCACCGCCCC CGTTTTTCGTTAGCA Atu1480 1472766 - 1472110 - | hypothetical protein TERM 1751 1472227 - 1472251 + g 76 -12.1 -3.36515 | overlap 1472225 ATCCTCTCCCTGCTT CCAGTTGGCGG GCG TCGCCACCTGG TGTTTGGAGGTGAGC Atu1481 1473401 - 1472907 - | hypothetical protein Atu1482 1474173 - 1473553 - | hypothetical protein TERM 1752 1473802 - 1473818 + g 70 -4.3 -4.45083 | overlap 1473792 1473801 CGCGGCCCAGTCGGT GGGTTCG TCC CGTATCC TTTTCTCGATATCGA TERM 1753 1474282 - 1474294 + r 74 -7.7 -4.11216 | CGGAGACAGCAGGGC TGTGC AAG GCACA TTTTAACAATGCCAG Atu1483 1475191 - 1474547 - | cytochrome b561 prtR 1475971 - 1475195 - | transcriptional regulator TERM 1754 1475232 - 1475274 + g 80 -14.3 -2.98493 | gap 2, overlap 1475230 TCTTTGGCGATGGCG TCC-ATGCGGTC-CGTCGGCA GGT TGCCGACGAGGGCGCATCGGA TCATTTCGTCGTCCC prtI 1476474 - 1475968 - | ECF family RNA polymerase sigma factor Atu1486 1476869 - 1476480 - | hypothetical protein Atu1487 1477546 - 1476980 - | hypothetical protein tnp 1478723 - 1477722 - | IS30 family transposase TERM 1755 1478068 - 1478085 + g 71 -9.1 -3.71848 | TTATCCATGATTGGC CCCGAGT GCCG GCTCGGG TTCTTGATAAGAACG arsH 1479590 - 1478901 - | arsenical resistance protein arsC 1480026 - 1479604 - | arsenate reductase Atu1491 1481087 - 1480029 - | sodium bile acid symporter family protein TERM 1756 1480255 - 1480222 - G 80 -4 -5.055 | gap 2, opp_overlap 1480250 GCAAGTTCGAAAAAA TTGCTGGCGCCGATCA GGGC CGAT-GG-ACCAGCAA CGCAGTGCCTTTCTC Atu1492 1481571 - 1481218 - | ArsR family transcriptional regulator clc 1483487 - 1481706 - | chloride channel protein Atu1494 1484412 - 1483588 - | metal dependent hydrolase Atu1495 1485197 - 1484415 - | hypothetical protein metS 1486758 - 1485208 - | methionyl-tRNA synthetase holB 1487895 - 1486870 - | DNA polymerase III subunit delta' TERM 1757 1487743 - 1487720 - G 77 -11.8 -3.5627 | gap 1 ACATGATTGGCGAAA CGG-AAGGCGA GCG TCGCCTTGCCG ATGCCCTCCGGTCCT tmk 1488454 - 1487888 - | thymydilate kinase TERM 1758 1488121 - 1488131 + g 71 -8.2 -4.07885 | CACGTTTTCTGGCGC GGGC CAG GCCC TTTTCGGCAGCGATA TERM 1759 1488658 - 1488648 - R 70 -3.2 -4.82901 | CGCTTTTGAGAAAAA CCAG TGC CTGA ACAAAAGCATAGGAA TERM 1760 1488702 - 1488688 - R 74 -7.8 -4.21676 | ATAAGGCAGCGAAAA TGGCCG TCA CAGCCA GAAGAGCAGCAATTC dac 1489866 - 1488694 - | penicillin binding protein rlpA 1490983 - 1489940 - | rare lipoprotein A TERM 1761 1490582 - 1490559 - G 71 -7.4 -4.26076 | gap 1 CGACCTTCATGAAAA GGTCCGCGATC GTT GA-CGCGTACC AGCACCGAAGAGCCA Atu1501 1491357 - 1491701 + | hypothetical protein TERM 1762 1491724 - 1491739 + T 90 -11.8 -3.99324 | opp_overlap 1491712 1491711, overlap 1491729 AACCACCGCCTGGAA CCCGCC GTAA GGCGGG TTTCTCGTCGTGACG TERM 1763 1491744 - 1491755 + T 71 -4.4 -4.56597 | opp_overlap 1491712 1491711, overlap 1491729 CGTAAGGCGGGTTTC TCGT CGTG ACGA TTTTTGGCCACCCCA Atu8017 1492189 - 1492025 - | hypothetical protein TERM 1764 1492429 - 1492448 + r 100 -12.1 -5.86976 | opp_overlap 1492427 CCGAGCGATCAACCT GCCCCGC CCGTTT GCGGGGC TTTTTTCTTTTATGG Atu1503 1492746 - 1492519 - | hypothetical protein Atu8090 1493163 - 1493882 + | hypothetical protein TERM 1765 1493888 - 1493876 - f 73 -9.1 -3.85184 | overlap 1493868 CGTAAAAGACGGAAA GCCGT GAC ACGGC ACGGCACAGATTGGG TERM 1766 1493904 - 1493917 + F 74 -6.7 -4.36914 | ACGGCACAGATTGGG TGCGA AAAG TCGCA TTTTATGGAAGGCGG TERM 1767 1495376 - 1495353 - g 78 -5.1 -4.82154 | overlap 1495316 1495354 AACGCACAGGAAAAA GGCGGCGCG GCACTG CGCTCCGCA AAACCCTTCACGGTC TERM 1768 1495515 - 1495491 - g 75 -2.1 -4.89063 | gap 1 GTATTGAAAAAGAAA GGCGTGA-GC TGCTGG GCGTCACTCC AGTAACTGATGTTTC dac 1494021 - 1495520 + | penicillin-binding protein Atu1506 1495604 - 1495864 + | hypothetical protein TERM 1769 1495895 - 1495930 + T 100 -17.6 -3.23853 | opp_overlap 1495900, overlap 1495900 AAGCAAGACCCAAAG AAAAACCCCGCGGCGC TCAA GCACCGCGGGGTTTTC TGTTGATTGGCGAAG TERM 1770 1495925 - 1495900 - T 100 -19.7 -5.31519 | opp_overlap 1495900 1495895 AGACCCAAAGAAAAA CCCCGCGGCGC TCAA GCACCGCGGGG TTTTCTGTTGATTGG TERM 1771 1495900 - 1495925 + T 100 -17.5 -4.73864 | opp_overlap 1495900, overlap 1495895 AGACCCAAAGAAAAA CCCCGCGGCGC TCAA GCACCGCGGGG TTTTCTGTTGATTGG TERM 1772 1495970 - 1495952 - T 90 -11.7 -4.05446 | TTGGCGAAGCAGAAA CGAGGCG GCTTA CGCCTCG CTCTCCGGTGCTTCA gyrA 1498681 - 1495961 - | DNA gyrase subunit A TERM 1773 1499415 - 1499398 - g 71 -5.5 -4.4078 | CCGGCTCAATGAAAA CCACCGT CGAG ATGGTGG TGCTCATCCTGATCC Atu1508 1498971 - 1499600 + | hypothetical protein TERM 1774 1500294 - 1500310 + G 78 -2.2 -5.06414 | opp_overlap 1500305 ACGACCGATCCCACG CCCATC CAGAA GATCGG TTTTTCTTCGACCGA Atu1509 1499733 - 1500881 + | hypothetical protein Atu1510 1501213 - 1500923 - | hypothetical protein Atu1511 1501472 - 1501206 - | hypothetical protein ssb 1502084 - 1501563 - | single-strand DNA-binding protein TERM 1775 1501937 - 1501969 + g 70 -9.8 -3.55444 | gap 1 GCCATTCGGTCTTTT CCTTGCGCTCACCGC TGTT GCGGTC-GCGCCAGG TTTCCGAGGTGGCGA uvrA 1502391 - 1505312 + | excinuclease ABC subunit A TERM 1776 1505301 - 1505320 + F 89 -13.6 -3.54459 | opp_overlap 1505295 1505296 GCCGGGAAACGCGAG GCTGCGGA GTAA TCCGCAGC TTTGGCAAAGGTTCA TERM 1777 1505464 - 1505447 - g 78 -7 -4.59773 | TTTTATCCGGAAAAA CTGACG AAGAAA CGTCAG CTCGAACATGCCAGC Atu1514 1505366 - 1506166 + | hypothetical protein TERM 1778 1506181 - 1506158 - T 78 -6.6 -4.67904 | overlap 1506159 CAGGAACTGCAAAAA GCGGTCTGAG GCGT CTCAGCCGGC CAGTTCTTTCATCGG Atu1515 1507183 - 1506173 - | tRNA-dihydrouridine synthase A Atu1516 1507322 - 1508011 + | hypothetical protein Atu1517 1508043 - 1508573 + | hypothetical protein zur 1509029 - 1508616 - | FUR family transcriptional regulator znuB 1509844 - 1509026 - | ABC transporter, membrane spanning protein (zinc) TERM 1779 1509245 - 1509228 - G 79 -8.3 -4.56597 | opp_overlap 1509227, overlap 1509199 1509229 GGCGTGCTGGAAAAA CGCCGCG CGGT CGCGGCC GGTATGATGAGCAGC TERM 1780 1509244 - 1509229 - G 72 -11.8 -3.33744 | opp_overlap 1509227, overlap 1509228 1509199 GCGTGCTGGAAAAAC GCCGCG CGGT CGCGGC CGGTATGATGAGCAG znuC 1510736 - 1509837 - | ABC transporter, nucleotide binding/ATPase protein (zinc) TERM 1781 1511196 - 1511177 - g 79 -7.8 -4.57341 | overlap 1511178 1511179 1511191 AAGGGTCTCGAAAAA CTGCCCTT CCGA AAGGGCGG CCCCTTCGAGGCGCA TERM 1782 1511493 - 1511516 + G 76 -8.9 -4.10429 | opp_overlap 1511484 1511492 1511493, overlap 1511511 1511512 TAGAGACGGTGAAAC CGGTGAAGG ACAAGC CCTTCATCG TTTTCCACGATGCTT znuA 1510841 - 1511830 + | ABC transporter, substrate binding protein (zinc) Atu1522 1512871 - 1511852 - | LacI family transcription regulator TERM 1783 1513811 - 1513842 + G 73 -4.3 -4.69326 | opp_overlap 1513811 1513808, overlap 1513812 TCCATTCCAACATCA CGGCTGGCGCG GAGCGGCAGG CGCGGCAGCCC TTTTATATTCCCTAT TERM 1784 1515082 - 1515051 - g 71 -9.4 -3.84406 | opp_overlap 1515051 1515074 1515075 GCTGCACCAGAAGAA TGTCGGCGGCAATG AACG CATTGCCGGCACCA TGTTCCGCTATTTCC manA 1513408 - 1515891 + | beta-mannosidase precursor TERM 1785 1515911 - 1515928 + F 74 -6.9 -4.30978 | opp_overlap 1515911 1515913, overlap 1515915 CCCTCTTGGGAATGA CAGGGGC GCCC GCGCCTG TTTTCATCGATTCAA Atu1524 1515995 - 1517026 + | hypothetical protein TERM 1786 1517065 - 1517036 - f 79 -11.4 -3.76224 | overlap 1517038 GTCTGACGTATTAAA CAGACCGTCCGG TCTCCG CCGGGCGGTCTA AAACTCCAAGAGCGG TERM 1787 1517063 - 1517038 - f 81 -11.8 -3.46647 | overlap 1517036 CTGACGTATTAAACA GACCGTCCGG TCTCCG CCGGGCGGTC TAAAACTCCAAGAGC Atu1525 1517218 - 1517544 + | hypothetical protein TERM 1788 1517566 - 1517593 + T 100 -14.2 -4.13654 | opp_overlap 1517571, overlap 1517571 CCATAAACCGAAATG AAAAAGGCCCGC TTGC GCGGGCCTTTTG TTTGTCGTTTCAGCC TERM 1789 1517588 - 1517571 - T 100 -14.1 -5.01042 | opp_overlap 1517571 1517566 AACCGAAATGAAAAA GGCCCGC TTGC GCGGGCC TTTTGTTTGTCGTTT TERM 1790 1517571 - 1517588 + T 100 -14.1 -5.06089 | opp_overlap 1517571, overlap 1517566 AACCGAAATGAAAAA GGCCCGC TTGC GCGGGCC TTTTGTTTGTCGTTT gntZ 1519041 - 1517611 - | 6-phosphogluconate dehydrogenase fixS 1519354 - 1519193 - | nitrogen fixation protein FixS fixI 1521642 - 1519351 - | nitrogen fixation protein FixI TERM 1791 1521151 - 1521122 - G 70 -3.4 -4.65933 | gap 1, overlap 1521135 1521138 GACTGGTAAAAGAAA CGCC-CGCCATAG ATCAG CGCCGGCGCGGCG ATCATCGCCGATATC TERM 1792 1521349 - 1521390 + g 73 -9.3 -3.90744 | overlap 1521351 CGTCGCAAGGATGGC GCGGGCAATGTCGGCGGGA TCGG TCCTGACGCCATTGACCTC TTCTTTCCAGACAAC TERM 1793 1521351 - 1521388 + g 70 -10.5 -3.54488 | overlap 1521349 TCGCAAGGATGGCGC GGGCAATGTCGGCGGGA TCGG TCCTGACGCCATTGACC TCTTCTTTCCAGACA fixH 1522139 - 1521639 - | nitrogen fixation protein FixH fixG 1523719 - 1522136 - | nitrogen fixation protein FixG TERM 1794 1522624 - 1522661 + g 72 -12.7 -3.06261 | gap 1 CGCGCTTGCTGAAGC TGCCGTCCTCCTCGCGCA CAT TG-GCGGGGCGGATGGCG TATTCGCCGTTGCCG TERM 1795 1523463 - 1523450 - G 84 -3.7 -5.18297 | overlap 1523451 GAAGAAGAAATAAAA GCGCC GGTT GGCGA TATCGATCAGCACCG Atu1531 1523840 - 1524244 + | hypothetical protein Atu1532 1524256 - 1524612 + | glyoxalase/bleomycin resistance protein/dioxygenase superfamily protein Atu1533 1524629 - 1525075 + | glyoxalase/bleomycin resistance protein/dioxygenase superfamily protein TERM 1796 1525083 - 1525103 + T 80 -9.6 -4.03167 | opp_overlap 1525084, overlap 1525084 ACGCCTGATCTGAAA AGGGCGCC TCGCC GGCGCCCC TTCTTTACATTCTAC TERM 1797 1525084 - 1525102 + T 81 -13.1 -3.01177 | opp_overlap 1525084, overlap 1525083 CGCCTGATCTGAAAA GGGCGCC TCGCC GGCGCCC CTTCTTTACATTCTA TERM 1798 1525102 - 1525084 - T 95 -13.1 -4.13767 | opp_overlap 1525084 1525083 CGCCTGATCTGAAAA GGGCGCC TCGCC GGCGCCC CTTCTTTACATTCTA fixP 1525987 - 1525124 - | cytochrome-c oxidase, FixP chain TERM 1799 1525653 - 1525641 - G 73 -10.5 -3.58269 | CAATTGACCTTGAAA GCGGC AGC GCCGC CGGAAAGGGCAAATT TERM 1800 1526012 - 1526032 + r 74 -2.5 -5.00616 | gap 1, overlap 1526011 CTCCCTGAGCGGAAT GCTGGCGG CATCGT CCG-CGGC TTTTTTGGAGCCGGG fixQ 1526143 - 1525991 - | cytochrome c oxidase, FixQ chain fixO 1526887 - 1526156 - | cytochrome C oxidase, FixO chain fixN 1528520 - 1526898 - | cytochrome-c oxidase, FixN chain TERM 1801 1528491 - 1528479 - G 78 -10.5 -3.93236 | opp_overlap 1528470 1528469 GAGCAACGCGAGAAA GGCCC CGA GGGCC ACGATCGCGGTTTCT TERM 1802 1529097 - 1529150 + G 74 -3.2 -4.8622 | gap 2, overlap 1529122 1529123 GCCGCGCTCGTGCCG CAGCCCGGACAGAAGATGCTGCTGGT CGCC GTC-GCGGTGTTTCTTGT-CGGGCTG TTTTTCCTTGCCGCC TERM 1803 1529123 - 1529135 + G 74 -6.9 -4.31433 | overlap 1529122 1529097 GAAGATGCTGCTGGT CGCCG TCG CGGTG TTTCTTGTCGGGCTG TERM 1804 1529958 - 1529982 + G 74 -6.4 -4.42238 | gap 2, overlap 1529957 1529959 CAGGACCTCGTGCTT GC-C-CTGGCGG CAA CCGCCGGCGTGC TTTTCCTTGGCGTCC TERM 1805 1530381 - 1530408 + G 75 -8.4 -4.18018 | gap 1, overlap 1530382 GATGCGGTGCGCGAC G-TTGTCGCCGCC GGT GGCGGAGACGATC TTTTGCGTCGGGCAA TERM 1806 1530382 - 1530406 + G 82 -12.1 -3.69216 | overlap 1530381 ATGCGGTGCGCGACG TTGTCGCCGCC GGT GGCGGAGACGA TCTTTTGCGTCGGGC hvsT 1528866 - 1530479 + | sulfate permease TERM 1807 1530951 - 1530963 + G 82 -9.1 -4.36914 | TTCCCTTCTCCGAAT TCGGC TGG GCCGA TTTTCTGAGACGACG Atu1540 1530476 - 1531093 + | hypothetical protein Atu1541 1531090 - 1533165 + | hypothetical protein cobP 1533742 - 1533221 - | adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase Atu1544 1534244 - 1534936 + | hypothetical protein TERM 1808 1535079 - 1535059 - g 74 -5.3 -4.55128 | overlap 1535070 AGCCGCAAATGAAAA CCGCCGCAA AGG TCGCATCGG CGGGCTGGATACCCT TERM 1809 1535837 - 1535823 - g 89 -7.1 -5.03145 | CAAGCTGCGAAAAAA GCTGC GTCGA GCAGC CGAACGGGGCGGAAC Atu1545 1535030 - 1535995 + | hypothetical protein TERM 1810 1536043 - 1536063 + T 79 -12.6 -2.89742 | overlap 1536058 TCAGACTCGGCGTCA TCCTCGGG CTTGA CCCGAGGA TCTATCCACGTTGCA Atu1546 1536566 - 1536180 - | MerR family transcriptional regulator mgtE 1538065 - 1536638 - | magnesium transport protein TERM 1811 1536703 - 1536689 - G 81 -5.6 -4.72486 | overlap 1536690 1536697 1536698 CAGAAAGGCGAAAAA GCCGAC AAT GTCGGT CACCGCCGTCACGAA TERM 1812 1537694 - 1537657 - G 70 -10.5 -3.48924 | overlap 1537659 GCAGTTGCGAGAGAA TATCCTCGCGGTCCTCG TCGT CGAGGTCCTCGAGAATG TAGACCGCGTCGTCC TERM 1813 1537692 - 1537659 - G 76 -13.1 -3.31905 | overlap 1537657 AGTTGCGAGAGAATA TCCTCGCGGTCCTCG TCGT CGAGGTCCTCGAGAA TGTAGACCGCGTCGT TERM 1814 1537856 - 1537828 - G 74 -10.9 -3.42621 | opp_overlap 1537837 AATCGGAACCCAGAA GCCTAACCAGCGC GTG GCGCTGTTCCGGC AGGATGGATTCGAGC TERM 1815 1538535 - 1538522 - g 71 -6.7 -4.18018 | overlap 1538534 GGGGCGCACTCAAAA GCGTT GGCA AACGC CTGCTGGAATCCGGG TERM 1816 1539733 - 1539721 - g 100 -10.5 -4.7497 | opp_overlap 1539721 GGCATCGACGAAAAA GCGCC GCC GGCGC TTCTCGACGCACTGG TERM 1817 1539766 - 1539754 - g 70 -3.4 -4.62783 | overlap 1539757 1539759 GACGCACTGGAAAAA GAAC TCGGC GTTC CCATGCCGCGCAAGC TERM 1818 1540348 - 1540329 - g 70 -4.9 -4.57073 | CACGCCGGCGAAAAA GGCCACC TTCTAT AGCGGCC CCCTGCCCGAGAAAA fdhF 1538392 - 1540758 + | formate dehydrogenase H alpha subunit Atu1549 1540748 - 1541074 + | hypothetical protein def 1541091 - 1541585 + | peptide deformylase Atu1551 1542017 - 1541589 - | hypothetical protein Atu8158 1542139 - 1542306 + | hypothetical protein TERM 1819 1542332 - 1542347 + T 100 -11.8 -5.055 | opp_overlap 1542332 GAGCGAAACGAGAAA GGCGGC GAAA GCCGCC TTTTTTGCGCATTCG TERM 1820 1542347 - 1542332 - T 91 -11.8 -4.14725 | opp_overlap 1542332 GAGCGAAACGAGAAA GGCGGC GAAA GCCGCC TTTTTTGCGCATTCG Atu1553 1542803 - 1542378 - | hypothetical protein Atu1554 1543000 - 1543188 + | hypothetical protein TERM 1821 1543348 - 1543361 + F 88 -9.5 -4.49958 | opp_overlap 1543348 CCAAAAAAGAAAAAA CCCGC CGAA GCGGG TTTCTTTGGTGCGGT TERM 1822 1543361 - 1543348 - f 100 -9.5 -6.04324 | opp_overlap 1543348 CCAAAAAAGAAAAAA CCCGC CGAA GCGGG TTTCTTTGGTGCGGT lipB 1543672 - 1544373 + | lipoyltransferase TERM 1823 1545111 - 1545097 - g 78 -2.8 -5.06451 | GAGGATGCCAAAAAA CTCG GCGCACA CGAG GTGATCATCTCCCGC Atu1557 1544440 - 1545507 + | alcohol dehydrogenase Atu1558 1545618 - 1546514 + | permease Atu1559 1546984 - 1546526 - | hypothetical protein crtB 1547953 - 1547108 - | phytoene synthase Atu1561 1548369 - 1547977 - | hypothetical protein TERM 1824 1548322 - 1548348 + g 81 -13.7 -3.40597 | opp_overlap 1548290 1548314 1548311, overlap 1548320 ATAAGCATCGAGGGG CGCCCGGCC GGGAAAGTG GGCCGGGCG TATTTCGATCCCGCC TERM 1825 1548354 - 1548405 + g 78 -2.9 -5.14682 | gap 2, opp_overlap 1548314 1548311 1548374, overlap 1548359 GGGCCGGGCGTATTT CGATCCCGCCGGCCATCAGACGGCA GGCT TGCCGCCA-ATGG-CGCCGGTGTTG TTTTCTTTCTTGTCG secD 1550942 - 1548369 - | bifunctional preprotein translocase subunit SecD/SecF yajC 1551372 - 1551025 - | preprotein tranlocase protein Atu1564 1551580 - 1552452 + | hypothetical protein cysE 1553060 - 1552458 - | serine acetyltransferase TERM 1826 1552775 - 1552755 - G 85 -2.3 -5.4505 | overlap 1552756 GTGCTGAATAAAAAA GCCGGGGCC GAT GGTCCGGGT GTGAATGTGCAGCGT TERM 1827 1552838 - 1552822 - G 93 -5.7 -5.54192 | AGGAACTTAAAAAAA CGCGCTC GCG GTACGCG ATAATAAAAAAGATT TERM 1828 1552920 - 1552934 + g 78 -7.2 -4.65895 | TGATCGCCCACTTAT CTTCTT TCC AAGAAG TTTTTCGCTCCACAC Atu1566 1553352 - 1553110 - | hypothetical protein fdhA 1553545 - 1554741 + | glutathione-independent formaldehyde dehydrogenase TERM 1829 1554800 - 1554771 - T 75 -11.3 -3.37344 | opp_overlap 1554773, overlap 1554772 1554775 TTTCCAGGGAATGAA GGCACCCGCGGCA ATCT CGCCGCGGGTGTT TTTTGTCTCCTGTCT TERM 1830 1554799 - 1554772 - T 83 -14.8 -2.62192 | opp_overlap 1554773, overlap 1554771 1554775 TTCCAGGGAATGAAG GCACCCGCGGCA ATCT CGCCGCGGGTGT TTTTTGTCTCCTGTC TERM 1831 1554773 - 1554798 + T 100 -17.6 -5.40625 | opp_overlap 1554772 1554771 1554775 TCCAGGGAATGAAGG CACCCGCGGC AATCTC GCCGCGGGTG TTTTTTGTCTCCTGT TERM 1832 1554796 - 1554775 - T 83 -15.1 -2.6072 | opp_overlap 1554773, overlap 1554772 1554771 CAGGGAATGAAGGCA CCCGCGGCA ATCT CGCCGCGGG TGTTTTTTGTCTCCT Atu1568 1555491 - 1554829 - | TetR family transcriptional regulator TERM 1833 1555564 - 1555549 - H 71 -6.2 -4.26079 | TTAAATCAGTCAAAA TAAGGT ATGC ACCTTA ACAGCAAGTTGCCAT TERM 1834 1556536 - 1556506 - g 72 -13.9 -2.67803 | overlap 1556502 1556503 TGTCGAGGAAATCGA GGCCGTTACCGGC GGTGA GCCGGTCGCGGCC GAACATATCGCCAAT cyc 1555607 - 1557001 + | cytochrome P450 TERM 1835 1556984 - 1557017 + T 90 -10.9 -4.25104 | opp_overlap 1556987, overlap 1556986 1556987 ACCCAGCGACAAAAC AAATCGCCCGCGGTG TAAC CACCACGGGCGACTG TTTTAATGCGAAAAC TERM 1836 1556986 - 1557015 + T 89 -13.5 -3.73042 | opp_overlap 1556987, overlap 1556984 1556987 CCAGCGACAAAACAA ATCGCCCGCGGTG TAAC CACCACGGGCGAC TGTTTTAATGCGAAA TERM 1837 1556987 - 1557014 + T 91 -17 -2.83504 | opp_overlap 1556987, overlap 1556986 1556984 CAGCGACAAAACAAA TCGCCCGCGGTG TAAC CACCACGGGCGA CTGTTTTAATGCGAA TERM 1838 1557014 - 1556987 - T 100 -19.2 -4.7878 | opp_overlap 1556986 1556984 1556987 CAGCGACAAAACAAA TCGCCCGCGGTG TAAC CACCACGGGCGA CTGTTTTAATGCGAA TERM 1839 1557051 - 1557032 - T 74 -7.8 -4.19238 | overlap 1557033 GTTTTAATGCGAAAA CCCATCCG TCAC CGGATGGT GCCGATCAGAGATCG TERM 1840 1557050 - 1557033 - T 72 -11.3 -3.11222 | overlap 1557032 TTTTAATGCGAAAAC CCATCCG TCAC CGGATGG TGCCGATCAGAGATC Atu1570 1557374 - 1557057 - | hypothetical protein cysE 1558205 - 1557381 - | serine acetyltransferase TERM 1841 1558384 - 1558374 - R 77 -8.2 -4.18018 | opp_overlap 1558374 TTTGTGGACGGAAAA CCGG GCT CCGG TTTTGCTGGACATGC TERM 1842 1558374 - 1558384 + r 81 -8.2 -4.26076 | opp_overlap 1558374 TTTGTGGACGGAAAA CCGG GCT CCGG TTTTGCTGGACATGC Atu1572 1559182 - 1558406 - | hydrolase Atu1573 1559353 - 1559598 + | hypothetical protein TERM 1843 1560083 - 1560112 + G 73 -9.2 -3.91897 | gap 1 TCACGATCTGATCGT CGGCGCCGACGGC GTCTG GTCGGCGGC-CCG TTTCTCCGTGCCGGC TERM 1844 1560677 - 1560662 - g 95 -11.8 -4.52589 | opp_overlap 1560662 1560655 1560651 GCCGCGCATAGAAAA GGCCCG CAAG CGGGCC TCTCTCAATCGTTTT TERM 1845 1560701 - 1560737 + G 80 -10.2 -4.08767 | gap 2, overlap 1560703 1560708 TCGTTTTGCCTATCA TGCCAGAGGCCCGGTGCG CAT CGCAC-GGGAC-CTGGTA TTTTCCACCCGTCCC TERM 1846 1560703 - 1560735 + G 73 -10.6 -3.6422 | gap 2, overlap 1560701 1560708 GTTTTGCCTATCATG CCAGAGGCCCGGTGCG CAT CGCAC-GGGAC-CTGG TATTTTCCACCCGTC nah 1559628 - 1560809 + | salicylate hydroxylase metC 1562006 - 1560819 - | cystathionine beta-lyase TERM 1847 1561899 - 1561883 - G 70 -3.6 -4.59773 | CCGCATCGGGAAAAA GCACGG TCGAG CCACGC ACGATGGGAGGATTG Atu1577 1562468 - 1563406 + | ABC transporter, substrate binding protein (amino acid) TERM 1848 1563435 - 1563461 + F 100 -15.8 -4.23007 | opp_overlap 1563431, overlap 1563436 CGGCTAGATCACGAC GGGAGGCTGGGC AAC GCCCGGCCTCCA TTTTAGAATTATATA TERM 1849 1563436 - 1563460 + F 100 -19.3 -3.13081 | opp_overlap 1563431, overlap 1563435 GGCTAGATCACGACG GGAGGCTGGGC AAC GCCCGGCCTCC ATTTTAGAATTATAT Atu1578 1563516 - 1564712 + | ABC transporter, membrane spanning protein (amino acid) Atu1579 1564715 - 1565872 + | ABC transporter, membrane spanning protein (amino acid) Atu1580 1565885 - 1566658 + | ABC transporter, nucleotide binding/ATPase protein (amino acid) TERM 1850 1566670 - 1566684 + F 86 -7.8 -4.74103 | TTGATCGTAGACAGG CGTCTG GGG CGGACG TTTTTCAATTGCGAA TERM 1851 1566704 - 1566729 + F 100 -17.7 -5.03314 | opp_overlap 1566704 1566708, overlap 1566708 TCAATTGCGAACTCA GAAACGGGACC TCAC GGTCCCGTTTC TTTTTTGAGACTGAA TERM 1852 1566729 - 1566704 - f 95 -17.7 -2.53911 | opp_overlap 1566704 1566708, overlap 1566708 TCAATTGCGAACTCA GAAACGGGACC TCAC GGTCCCGTTTC TTTTTTGAGACTGAA TERM 1853 1566708 - 1566725 + F 100 -12.7 -5.04249 | opp_overlap 1566708 1566704, overlap 1566704 TTGCGAACTCAGAAA CGGGACC TCAC GGTCCCG TTTCTTTTTTGAGAC TERM 1854 1566725 - 1566708 - f 93 -12.7 -3.97368 | opp_overlap 1566704 1566708, overlap 1566704 TTGCGAACTCAGAAA CGGGACC TCAC GGTCCCG TTTCTTTTTTGAGAC Atu1581 1566877 - 1567032 + | hypothetical protein TERM 1855 1567510 - 1567467 - f 76 -12.4 -3.05384 | gap 1, opp_overlap 1567467, overlap 1567472 TCCCCCCCGATGGAA GGCAAGCCGGACGAAATG-CC ATC GGTCAAATCAACCGGCTTGCC TTTCCCCTCACCTCG TERM 1856 1567467 - 1567510 + F 74 -10.2 -3.60627 | gap 1, opp_overlap 1567467 1567472 TCCCCCCCGATGGAA GGCAAGCCGGACGAAATG-CC ATC GGTCAAATCAACCGGCTTGCC TTTCCCCTCACCTCG Atu1584 1567482 - 1567700 + | hypothetical protein TERM 1857 1567716 - 1567706 - T 89 -3.2 -5.60993 | overlap 1567707 1567708 GCGTCTATAAAAAAA CTCG TCT CGAA GCGGAAAAAATCAAT recJ 1569800 - 1567992 - | single-stranded-DNA-specific exonuclease TERM 1858 1568235 - 1568207 - G 81 -13.2 -3.28712 | gap 1 GTGCTGTGCCCACAA GCC-GCACATCGC GCAG GCGATGCGCCGGC ACGGCAAAGATCGGC TERM 1859 1568822 - 1568856 + g 74 -12.1 -3.14132 | opp_overlap 1568818 TCGTCAGCAGACGGC TGCCGAGGGCTGCAT CGCCA ATGCGGCCGCCGGCA TTGATGCGCGGCCCG TERM 1860 1569513 - 1569537 + g 71 -8.6 -4.11692 | gap 2, overlap 1569524 CTCGCCGGTCTCGAT GGCGCGCACGAG CCG CTCG-GCG-GCC TTTTCGCAATCGGTC TERM 1861 1569862 - 1569888 + H 95 -15.3 -3.16564 | opp_overlap 1569862, overlap 1569830 GGGCTAAATGGCAAA GGCGCGTTTTT CAAGC AAAAACGCGCC TTGATGGAGTCACAC TERM 1862 1569888 - 1569862 - H 95 -15.3 -3.71649 | opp_overlap 1569830 1569862 GGGCTAAATGGCAAA GGCGCGTTTTT CAAGC AAAAACGCGCC TTGATGGAGTCACAC Atu1587 1569892 - 1570140 + | hypothetical protein TERM 1863 1570302 - 1570275 - T 100 -14.8 -5.1861 | TTCATGATGAAAAAA GGCCGCGCATCC CTAC GGAAGCACGGCC CTCGGCTTTGGACAA hom 1571641 - 1570331 - | homoserine dehydrogenase TERM 1864 1571671 - 1571691 + r 95 -15.4 -3.19513 | overlap 1571670 TTTGCTGGTGATGGT GGCGGCCG AGGCC CGGCCGCC TTCGGTTGCCCTTAT Atu1589 1572923 - 1571703 - | aminotransferase TERM 1865 1573093 - 1573113 + r 70 -6.7 -4.08216 | GCATCACAATCATCC GCCAGTGCC TCC GGCACAGCC TTTTCAGCCCCCTCG iunH 1574186 - 1573227 - | inosine-uridine preferring nucleoside hydrolase TERM 1866 1573583 - 1573594 + g 75 -2.2 -4.91511 | CCGCCATGAAAGCGC TGGT CATT ACCG TTTTTGTGGTGACAT TERM 1867 1573898 - 1573929 + g 71 -8 -4.11692 | opp_overlap 1573912 CGAGCGGCAGGTCGA TGGTCTCGGGAATA TCGA TATCACCGAGGCCA TTTTCGCCATGAATG TERM 1868 1575070 - 1575049 - g 78 -4.4 -4.8622 | gap 1, opp_overlap 1575049, overlap 1575051 TTTCGCAATGAAAAA CGGCGCGAA GATCA TCCGC-CCG CTTCTTGTTGTTTCC Atu1591 1574369 - 1575172 + | hypothetical protein TERM 1869 1575250 - 1575214 - T 91 -15.2 -3.1082 | gap 2, opp_overlap 1575245, overlap 1575216 CAGTCAGGCAACAGA CAGGCGCCCGCTGCCTCA GCC TGCGGC-GCGG-CGCCTG CGATCGGCGATTTCG TERM 1870 1575248 - 1575216 - T 76 -12 -3.11072 | gap 2, opp_overlap 1575245, overlap 1575214 GTCAGGCAACAGACA GGCGCCCGCTGCCTCA GCC TGCGGC-GCGG-CGCC TGCGATCGGCGATTT Atu1592 1575924 - 1575229 - | hypothetical protein msbB 1577141 - 1576203 - | lipid A biosynthesis lauroyl acyltransferase TERM 1871 1576791 - 1576773 - G 73 -8.8 -3.92522 | opp_overlap 1576774, overlap 1576774 GCGCAATTCGAGAAA GGTCGAGG TAC CCTCGACT TCGATGCGGCCGGGT TERM 1872 1576774 - 1576790 + g 72 -12.3 -3.05384 | opp_overlap 1576774 1576773 CGCAATTCGAGAAAG GTCGAGG TAC CCTCGAC TTCGATGCGGCCGGG TERM 1873 1576790 - 1576774 - G 70 -12.3 -2.95192 | opp_overlap 1576774, overlap 1576773 CGCAATTCGAGAAAG GTCGAGG TAC CCTCGAC TTCGATGCGGCCGGG Atu1595 1578166 - 1577138 - | NADPH:quinone reductase TERM 1874 1577267 - 1577282 + g 79 -9 -4.18018 | GCGCGCCATCTTCTG CATGGC ATTG GCCATG TTTTCCATGCGGCAG TERM 1875 1578081 - 1578124 + g 76 -5.3 -4.62471 | GCCTTGACGCGCAGC GT-CACCTCGCCCGGACCCGG AGCA TCGGGTTCAGGC-AGGTCCAC TTTTTCGAGCTTCCG fabF 1579589 - 1578309 - | 3-oxoacyl-(acyl carrier protein) synthase II fabF 1580798 - 1579602 - | 3-oxoacyl-(acyl carrier protein) synthase II TERM 1876 1579925 - 1579947 + g 75 -7.6 -4.28254 | opp_overlap 1579879 1579934 CGCTGTCCTTTGCAG GCGCAAGCAG GCG CTCCATGCGC TTTTCCATCTTGCCG TERM 1877 1580131 - 1580117 - G 80 -11.4 -3.74693 | overlap 1580084 CGCCACGCGACCAAA GCGGCT GCC AGCCGC CCTGTGCATGTGCGC TERM 1878 1580999 - 1580979 - R 91 -7.5 -5.08824 | overlap 1580994 1580995 GGCCGACGGAAAAAA CGCCCTCTT TTG AAACGGGCG GAAGCGCTTATTTCT fabZ 1581486 - 1581007 - | (3R)-hydroxymyristoyl-(acyl carrier protein)- dehydratase TERM 1879 1581549 - 1581567 + r 80 -11.7 -3.32844 | opp_overlap 1581549 GTCCGGAAAAAGAAA TGCCCGC TCGAT GCGGGCA TTGTCAGATCAGCCC TERM 1880 1581567 - 1581549 - R 100 -11.7 -4.85782 | opp_overlap 1581549 GTCCGGAAAAAGAAA TGCCCGC TCGAT GCGGGCA TTGTCAGATCAGCCC acpP 1581860 - 1581576 - | acyl carrier protein hemN 1583324 - 1581975 - | coproporphyrinogen III oxidase TERM 1881 1583689 - 1583679 - g 78 -2.4 -5.03314 | TCCAGCCGCAAAAAA CTGG AAG CCGG CAATGAGCTGCTTGG fnrN 1583538 - 1584263 + | Crp family transcriptional regulator Atu8159 1585255 - 1584728 - | hypothetical protein phbC 1585294 - 1587153 + | poly-beta-hydroxybutyrate synthase sfsA 1587185 - 1587904 + | sugar fermentation stimulation protein A map 1587933 - 1588769 + | methionine aminopeptidase TERM 1882 1588958 - 1588948 - g 71 -8.2 -4.06864 | GCCACAGAACAAGAA GCGG ATG CCGC TCACTATCACGGCCA radC 1588783 - 1589625 + | DNA repair protein RadC TERM 1883 1589745 - 1589720 - f 73 -5.5 -4.67697 | gap 1, overlap 1589724 TCCGAAAATAATAAA TCAAGGCATCGA ACC TTGATGCCT-GA AGGAACGGGGGTGCT TERM 1884 1590139 - 1590154 + G 76 -6 -4.58395 | overlap 1590140 GCTATACCCTGCCCG AGCCGG TCAT CCGGCG TTTTTCCACCATCCG Atu1608 1589763 - 1590185 + | hypothetical protein TERM 1885 1590982 - 1590962 - g 79 -8.9 -4.25283 | overlap 1590965 ACGTGCTGACCAAAA CCACCGGCT TGC AGCCGGCCG TGGTCAACATTTTGA Atu1609 1590187 - 1591926 + | hypothetical protein TERM 1886 1591944 - 1591977 + T 100 -19.7 -2.8372 | opp_overlap 1591949, overlap 1591949 CCGTCACCGCCCATA AAAAAGCCGCCGGGA GAGA TCCCGGCGGCTTTTC ATTTGATCAGCCCTG TERM 1887 1591972 - 1591949 - T 100 -19.6 -5.24531 | opp_overlap 1591944 1591949 ACCGCCCATAAAAAA GCCGCCGGGA GAGA TCCCGGCGGC TTTTCATTTGATCAG TERM 1888 1591949 - 1591972 + T 100 -19.6 -4.58773 | opp_overlap 1591949, overlap 1591944 ACCGCCCATAAAAAA GCCGCCGGGA GAGA TCCCGGCGGC TTTTCATTTGATCAG TERM 1889 1592000 - 1592020 + T 77 -7.6 -4.25104 | gap 1, opp_overlap 1591999 CAGCCCTGATATCAG GCGT-TGGC GATT GCCAGACGC TTTTCGTCGCGACCG dhs 1593372 - 1591996 - | 2-dehydro-3-deoxyphosphoheptonate aldolase TERM 1890 1593167 - 1593219 + g 75 -2.1 -5.00616 | gap 4, opp_overlap 1593190, overlap 1593171 1593201 AGGAAGCTTTCGGCG CAG-TCGCCACCCTGCAGCAGGAAGGC GTT GCCTTCC-GCCACAT--TGGCGAGCTG TTTTTTGAGGCGACG TERM 1891 1593589 - 1593539 - R 83 -12.6 -3.16608 | opp_overlap 1593539 1593540, overlap 1593543 1593564 ATTCAAACGATTTAA CGCACCCGCCGCCATCCAAAAA ACATCCG TTTTCGAAGGGCGGCGGGCGAA TTTGGACAGCGATCA TERM 1892 1593585 - 1593543 - R 89 -16.4 -2.56288 | opp_overlap 1593540 1593539, overlap 1593539 1593564 AAACGATTTAACGCA CCCGCCGCCATCCAAAAA ACATCCG TTTTCGAAGGGCGGCGGG CGAATTTGGACAGCG gor 1595012 - 1593624 - | glutathione reductase TERM 1893 1593828 - 1593849 + g 82 -8.8 -4.34402 | GCGGTCGCTCGCATT GACGATCA GCTTCA TGATCGTC TTTTCCTGTCGGCCG TERM 1894 1594003 - 1594017 + g 71 -7.8 -4.10144 | GCAATCAGCTCGTGA TCCGGC TTG GTCGGA TTGTTCTTGTATTCG TERM 1895 1595097 - 1595132 + r 73 -9 -3.91072 | opp_overlap 1595105, overlap 1595105 GTGCTGCGACGCACA AATGAAAAGCCCGGTC TTGC GACCGGGCTTTGAATA TTTCTGAACCTTTGA TERM 1896 1595105 - 1595124 + r 100 -15 -3.83324 | opp_overlap 1595105, overlap 1595097 ACGCACAAATGAAAA GCCCGGTC TTGC GACCGGGC TTTGAATATTTCTGA TERM 1897 1595124 - 1595105 - R 100 -15 -4.62475 | opp_overlap 1595105 1595097 ACGCACAAATGAAAA GCCCGGTC TTGC GACCGGGC TTTGAATATTTCTGA Atu8160 1595722 - 1595156 - | hypothetical protein rpiA 1596419 - 1595739 - | ribose-5-phosphate isomerase A TERM 1898 1596513 - 1596500 - H 70 -6.7 -4.12279 | GAAAGCCAAACGAAA GCCTT TTTC AAGGC AACAAACAGAACGTT gph 1596625 - 1597326 + | phosphoglycolate phosphatase TERM 1899 1597393 - 1597413 + T 76 -12.6 -2.79796 | TCACTCTCGACGTCA TCCTCGGC CTTGC GCCGAGGA TCTAATCACATCCAA TERM 1900 1597489 - 1597504 + T 70 -6.8 -4.15061 | gap 1, opp_overlap 1597489 GGAAGAGGGAATTCA GCGC-CG TTT CGTGCGC TTTCTCTCTCGATTG Atu1615 1599456 - 1597528 - | hypothetical protein TERM 1901 1598347 - 1598359 + g 71 -6.9 -4.2349 | GCCGATCACGCCATC CGGCT TCA GGCCG TTTTCGCTCTGGAAC TERM 1902 1600848 - 1600836 - g 76 -9.1 -4.07568 | overlap 1600839 GTCGCTGCCGGAAAA CGAGC CCG GCTCG TCGATCATGCCGGGC fumC 1599895 - 1601286 + | fumarate hydratase TERM 1903 1601316 - 1601331 + F 100 -11.8 -5.27335 | TGTGGGAATTGGGAA CGGGCC TTCG GGCCCG TTTTTGTTTGCCCGA TERM 1904 1601667 - 1601647 - g 93 -7.5 -5.2112 | AACATCAGCAAAAAA GGCGCTGTC ACC AACATCGCC ATACCGGGCCTTGAG Atu1617 1601485 - 1602417 + | hypothetical protein TERM 1905 1602479 - 1602514 + T 79 -13.4 -2.71364 | opp_overlap 1602467 1602488, overlap 1602488 AAAGTCTGTTCGCCA AACAAAAAAGGACCGC AAAC GCGGCCCTTTTTTGTA TCATTCAAACCGTCA TERM 1906 1602505 - 1602488 - T 100 -10.5 -5.63517 | opp_overlap 1602488 1602479, overlap 1602467 TCGCCAAACAAAAAA GGACCGC AAAC GCGGCCC TTTTTTGTATCATTC TERM 1907 1602488 - 1602505 + T 100 -8.3 -5.42131 | opp_overlap 1602467 1602488, overlap 1602479 TCGCCAAACAAAAAA GGACCGC AAAC GCGGCCC TTTTTTGTATCATTC pyrG 1604263 - 1602527 - | CTP synthetase TERM 1908 1603823 - 1603849 + g 74 -11.5 -3.46212 | opp_overlap 1603838, overlap 1603839 CGGAATGACCTGTAC CGTCGCGCCGA GATAG TCGCCGCGGCG TTCCTTGTCGATGAT TERM 1909 1604293 - 1604271 - R 100 -16.3 -5.27476 | opp_overlap 1604267 GCGAACAAAAGAAAA CCGGCAGGC TTTTG GCCTGCCGG AGCGTTAAATCAAAA TERM 1910 1604325 - 1604309 - R 73 -5 -4.55128 | AGCGTTAAATCAAAA CCGGGC TTATT GACCGG TCGGAACGGCGTTCG secG 1604788 - 1604315 - | preprotein translocase subunit SecG tpiA 1605674 - 1604904 - | triosephosphate isomerase Atu1621 1606768 - 1605887 - | hypothetical protein TERM 1911 1606273 - 1606283 + g 75 -8.2 -4.25104 | opp_overlap 1606261 TCAGCGCCGCGACAT CGGC AAC GCCG TTTTCGTCAAAGGAG TERM 1912 1606322 - 1606343 + g 81 -8.1 -4.58283 | gap 1 CGGCGCGTAATAGGT TC-CGCCATT GGC AATGGCGAGA TTTTTCAGCCGGTTG TERM 1913 1606686 - 1606674 - G 70 -10.5 -3.55563 | AGCTCATCCTTGAAA GGCCG CAG CGGCC CGTCAGCAGCCGGGG TERM 1914 1607681 - 1607700 + G 74 -11.4 -3.53012 | gap 1, opp_overlap 1607680 1607681 GGCGACGTGCATAAT CGC-CGCGG CAC CCGCGTGCG TTTCCACCCCGACCC TERM 1915 1608281 - 1608271 - g 71 -8.2 -4.09685 | opp_overlap 1608270, overlap 1608272 GCGCATTGTTGAAAA CGCG CTG CGCG ATCCCTTCGACCACT gyrB 1606994 - 1609126 + | DNA topoisomerase IV subunit B Atu1623 1610548 - 1609532 - | pyridine nucleotide-disulphide oxidoreductase Atu1624 1610646 - 1611305 + | TetR family transcriptional regulator TERM 1916 1611762 - 1611774 + G 74 -6.2 -4.57353 | GTGCGCTCAAGCCGG GCGG GCGGG CCGC TTTTGTCTGCTGGCG Atu1625 1611335 - 1612198 + | methyltransferase TERM 1917 1612295 - 1612276 - f 72 -12.1 -2.74201 | opp_overlap 1612290, overlap 1612289 1612290 ACGATAAATAAGGGA GGCCGGC AAGAAA GCCGGCC ATGGTGAGGCACAAC TERM 1918 1612577 - 1612594 + F 86 -4 -5.33026 | opp_overlap 1612578, overlap 1612578 TTTACGCGAATTCAA ACCGGG TTTCAT CCCGGC TTTTTCTTTCGGTTC TERM 1919 1612750 - 1612776 + F 91 -15.2 -3.13403 | opp_overlap 1612745 1612754 1612755, overlap 1612755 TCCGGATGAACCCTT GAAAGGCGGCGC CAG GCGCTGCTTTTC TGTTGATGCGGAGGG TERM 1920 1612755 - 1612771 + F 100 -11.5 -4.70583 | opp_overlap 1612754 1612755, overlap 1612750 ATGAACCCTTGAAAG GCGGCGC CAG GCGCTGC TTTTCTGTTGATGCG Atu1626 1612798 - 1613688 + | NAD dependent epimerase/dehydratase family protein clpP 1614304 - 1613696 - | ATP-dependent Clp protease proteolytic subunit Atu1628 1614704 - 1614348 - | hypothetical protein Atu1629 1615015 - 1614701 - | ArsR family transcriptional regulator TERM 1921 1614838 - 1614828 - G 79 -8.2 -4.4715 | TCGTAATTGACAAAA CGGC CCT GCCG CCTCTCCACCACGAG TERM 1922 1615061 - 1615072 + H 81 -3.6 -5.14563 | CACAAGCCCCCTGAT GCTG AAGC CGGC TTTTTTCGTCACGCC TERM 1923 1616097 - 1616080 - g 89 -9.8 -4.57073 | GATCCGCCCGAAAAA GCGGCG GGAAAA CGCCGC AAGGGCCATAATTTC Atu1630 1615171 - 1616727 + | phospholipase D family protein rrpX 1617491 - 1616742 - | two component response regulator TERM 1924 1616965 - 1616921 - G 72 -11.4 -3.32521 | gap 1, opp_overlap 1616923 ACGACACGCCGATAA TG-CGCAGCTCATGCGAACCG CGCA CGGTGCGGATGCGCCGCGTCA GTTCAAAACCGTCAA TERM 1925 1617683 - 1617715 + r 72 -12 -2.71924 | opp_overlap 1617683 1617689, overlap 1617682 1617691 ATATGCTTACCTAAA CGGAAATACGGCCC GCGAG GGGCCGTATTCCAG CTTTGGGAGGGAATG TERM 1926 1617715 - 1617683 - R 95 -14.2 -3.65529 | opp_overlap 1617683 1617682 1617691, overlap 1617689 ATATGCTTACCTAAA CGGAAATACGGCCC GCGAG GGGCCGTATTCCAG CTTTGGGAGGGAATG TERM 1927 1617709 - 1617689 - R 90 -12.6 -3.85909 | opp_overlap 1617683 1617682 1617691, overlap 1617683 TTACCTAAACGGAAA TACGGCCC GCGAG GGGCCGTA TTCCAGCTTTGGGAG TERM 1928 1617737 - 1617752 + r 71 -6.1 -4.2349 | overlap 1617740 GAGGGAATGATCTTA TGCGC GCAGCA GCGCA TTTTCCGTGTCGAAC Atu1632 1620247 - 1617734 - | dimethylglycine dehydrogenase TERM 1929 1618844 - 1618867 + g 82 -12.4 -3.61398 | opp_overlap 1618848 ATTGTGGCTGGTGAT GACATCGGCG CCGA CGCCGAGGTC TTCTTCCCGCAGCGC TERM 1930 1620109 - 1620091 - G 72 -12.4 -3.04263 | overlap 1620100 AGCTCATGTTGAACA GCGGCAAG AGG CCTGCCGC ATGCCAGGTGGAACC kefA 1622919 - 1620412 - | potassium efflux system KEFA TERM 1931 1622288 - 1622278 - G 79 -8.2 -4.56597 | GCGGCTGCCGAAAAA GCGG TAA CCGC CGACCAGAAACAACA TERM 1932 1622871 - 1622894 + g 76 -8.8 -4.00042 | gap 1, overlap 1622872 1622874 CCGTAGAGGCCTGGA TGGCGCCCGGC GCT GCCGG-CGTCG TTGTTTCCTGCGCAA Atu1634 1623203 - 1623457 + | hypothetical protein Atu1636 1624291 - 1623854 - | hypothetical protein Atu1637 1624601 - 1624933 + | hypothetical protein TERM 1933 1625067 - 1625035 - f 85 -9.1 -4.4891 | opp_overlap 1625058 CTGAGCAGCAGAAAA CTGCCGGAACGATGA TTA TCAGCGTTGCCGCAG CACCTTCTCCCCAAA Atu8018 1625101 - 1625352 + | hypothetical protein TERM 1934 1625342 - 1625329 - T 70 -6.7 -4.07687 | overlap 1625330 ATCTGGCGGCGAAAA CCGTT CCGG AACGG AAGGCTCTGAAAAAG TERM 1935 1625694 - 1625660 - T 71 -4.9 -4.65895 | gap 2, overlap 1625668 GGGCTGATCGAAAAA GCGGAACATGCCGGCTG GAA CCGCCAGCAGG--CCGC CCTTGCCATCGTCGC Atu1638 1626096 - 1625641 - | hypothetical protein TERM 1936 1625897 - 1625844 - G 70 -4.5 -4.51777 | opp_overlap 1625882, overlap 1625845 ACATCATAACGAAAA TCGACCCTGCAGACCCGG-AGTGTC CCGACC GACACTGCCGGAAC-GCTGGCTCGC GTCGTGGAAGCCGCC Atu1639 1626310 - 1626083 - | hypothetical protein TERM 1937 1626377 - 1626340 - R 83 -7.8 -4.56597 | gap 1, opp_overlap 1626345, overlap 1626345 CCTCGTCTCCAAAAA CGAAATCCCGTGCG-GA TCATC TCACGCACGGGATTTTC TGAATGAAGAAGTTA TERM 1938 1626372 - 1626345 - R 93 -12.1 -4.32046 | gap 1, opp_overlap 1626345, overlap 1626340 TCTCCAAAAACGAAA TCCCGTGCG-GA TCATC TCACGCACGGGA TTTTCTGAATGAAGA TERM 1939 1626345 - 1626372 + r 95 -12.1 -4.42386 | gap 1, opp_overlap 1626345 1626340 TCTCCAAAAACGAAA TCCCGTGCG-GA TCATC TCACGCACGGGA TTTTCTGAATGAAGA Atu1640 1626651 - 1626403 - | hypothetical protein TERM 1940 1626783 - 1626803 + G 100 -9.7 -5.0133 | overlap 1626785 TGTGCGGGCAAGTCG AAGGGCGAT TGC ATCGCCCTA TTTTTTCCGCACATC TERM 1941 1626785 - 1626801 + G 89 -12.3 -4.13561 | overlap 1626783 TGCGGGCAAGTCGAA GGGCGAT TGC ATCGCCC TATTTTTTCCGCACA Atu1641 1626691 - 1626864 + | hypothetical protein TERM 1942 1626937 - 1626947 + T 70 -6.8 -4.21607 | overlap 1626941 GCCTTGATCGTTCTT CCCT CAG AGGG TTTCTGTTGCATGGC Atu1642 1627131 - 1626940 - | hypothetical protein Atu1643 1627179 - 1627616 + | hypothetical protein TERM 1943 1627607 - 1627622 + T 72 -11.8 -2.78384 | opp_overlap 1627595, overlap 1627618 GAAGTCGCAGCAGGA CGCCGC CTGA GCGGCG TCTAATCGGCGGAAA Atu1644 1628280 - 1627675 - | hypothetical protein TERM 1944 1627783 - 1627804 + g 77 -10.9 -3.61103 | gap 1 GCTGACACGGGCGCT GGCGC-GGAA CAC TTCCTGCGCC TTTACCGTGCCGTTG Atu1645 1629666 - 1628296 - | ABC transporter, substrate binding protein Atu1646 1630511 - 1629675 - | ABC transporter, nucleotide binding/ATPase protein Atu1647 1631682 - 1630522 - | ABC transporter, membrane spanning protein TERM 1945 1632315 - 1632337 + G 79 -16.2 -2.83164 | opp_overlap 1632298 CGCCTGCGAGCCGTG CGCGCCGCGG CAC CCGAGGCGCG TATCATCATCGATGC Atu1648 1631826 - 1632809 + | mandelate racemase/muconate lactonizing enzyme family protein TERM 1946 1632838 - 1632851 + T 74 -6.7 -4.30719 | opp_overlap 1632833 AAAAAGATGAGGTGC TACGC CGCC GCGTA TTTCTTCTCCCCGCC Atu1649 1633894 - 1633064 - | hypothetical protein Atu1650 1635263 - 1634139 - | acyltransferase TERM 1947 1637233 - 1637253 + G 83 -15.5 -3.08679 | overlap 1637225 1637227 GTTTCGTCTGGCGCT CCGGCTTCA TCA TGAAGCCGG TCTTCAATGCCGCCA TERM 1948 1637318 - 1637285 - g 95 -12.5 -4.17048 | gap 1, overlap 1637312 1637315 GGCGGCCGAAAAGAA GCGCATCATCTTTGCC GAA GGCGAAGACGA-GCGC GTGCTGCGCGCCGCC maeB 1635918 - 1638233 + | malic enzyme TERM 1949 1638258 - 1638292 + F 100 -15.8 -3.65812 | opp_overlap 1638262, overlap 1638249 1638260 1638262 ATTAACGCAGTTTTG AACATGCTGTTGCCGC AAT GCGGCAACAGCATATG TTATCTTCCCGAAAC TERM 1950 1638260 - 1638290 + F 100 -18.4 -3.41024 | opp_overlap 1638262, overlap 1638249 1638258 1638262 TAACGCAGTTTTGAA CATGCTGTTGCCGC AAT GCGGCAACAGCATA TGTTATCTTCCCGAA TERM 1951 1638288 - 1638262 - f 100 -21 -3.03243 | opp_overlap 1638249 1638262 1638260 1638258 ACGCAGTTTTGAACA TGCTGTTGCCGC AAT GCGGCAACAGCA TATGTTATCTTCCCG TERM 1952 1638262 - 1638288 + F 100 -21 -3.27382 | opp_overlap 1638262, overlap 1638249 1638260 1638258 ACGCAGTTTTGAACA TGCTGTTGCCGC AAT GCGGCAACAGCA TATGTTATCTTCCCG TERM 1953 1638348 - 1638330 - f 72 -11.6 -3.09492 | TCCTGAAGCGTAACA CCCCTGCC ACC GGCCGGGG ACATCAAACGGATCG TERM 1954 1639099 - 1639083 - g 74 -10.9 -3.48292 | overlap 1639081 ACGGATCAGGAAACA GCAGACA TGG TGTCTGC GCAAACCGGCAAACC Atu1653 1638399 - 1639484 + | hypothetical protein TERM 1955 1639506 - 1639521 + T 86 -11.8 -3.79864 | overlap 1639504 TTGCGCGTGCGTAAT GGGGCG AGCG CGCCCC TGTTTCTTCTCTCCG TERM 1956 1639527 - 1639547 + T 76 -11.9 -3.14132 | AGCGCGCCCCTGTTT CTTCTCTCC GAG GGGGAGAAG TTCGTGACAGCGGGA TERM 1957 1639677 - 1639645 - T 74 -11.3 -3.29511 | opp_overlap 1639649, overlap 1639649 CCCATGCGCGGAGAA GGAACGAGAGGCGAC GCT ATCGCATCTCATCCC TTACCGCCCACCCCA Atu1654 1640364 - 1639678 - | nitroreductase tolB 1641574 - 1640744 - | tolB protein nadE 1643323 - 1641644 - | NAD synthetase TERM 1958 1643073 - 1643046 - G 80 -10.6 -4.11216 | gap 1 CCCTGACGCGGAAAA CCGATGACGACGC CCG GC-CCGCCATCGG CAGTCTCCGCCGCCA cgmA 1643693 - 1645486 + | cyclic glucan phosphoglycerol modification protein TERM 1959 1645509 - 1645552 + G 100 -16 -4.03234 | overlap 1645510 GGCTAGGGCGCCTGA ACCGCATGGCGGTGGAAATC GTTT GAATTCCGCCACCATGCGGG TTTATCTCGGGAAAA TERM 1960 1645510 - 1645551 + G 90 -19.5 -3.01726 | overlap 1645509 GCTAGGGCGCCTGAA CCGCATGGCGGTGGAAATC GTTT GAATTCCGCCACCATGCGG GTTTATCTCGGGAAA Atu1659 1645486 - 1646136 + | hypothetical protein Atu1660 1646246 - 1646785 + | hypothetical protein sthA 1646893 - 1648296 + | soluble pyridine nucleotide transhydrogenase Atu1662 1649143 - 1648496 - | hypothetical protein TERM 1961 1649190 - 1649164 - H 77 -11.4 -3.51232 | overlap 1649160 TCCCTGGCAAATTAA GGGCGCGCCGGG AGA CCCGGCAAGCAC GGTAAAAGCTTAAGG TERM 1962 1649365 - 1649409 + H 76 -10.5 -3.63922 | overlap 1649365 GCACTGCATTGTGAT CAGGATCTTCACGCGGCCGAG TGC CCCGGCCGCTTGACGAATCGG TGTTTTCCAACGGAT Atu1663 1649579 - 1650568 + | amidohydrolase TERM 1963 1650670 - 1650649 - T 95 -11.5 -4.62054 | opp_overlap 1650648 TGAATCAAACGAAAA GGCCGCAGC TTTC GCCACGGCC CTTCAATTCAATCAG tig 1652180 - 1650702 - | trigger factor TERM 1964 1651015 - 1651045 + g 70 -4.7 -4.46854 | overlap 1651011 1651032 TGCTGGCCCGGGAAC TGCTGCAGC-TGCTG GAA CAGCGCGC-GCTGCA TTTCTTCTTCGGTCA TERM 1965 1652390 - 1652417 + H 75 -11.4 -3.41051 | gap 1, opp_overlap 1652396, overlap 1652396 TAAAGATGCACTCTG GCACAAGCGTGGC ACA GCCATGCTT-TGC TTGTGGTGCGGGTAG TERM 1966 1652396 - 1652412 + H 80 -10.1 -4.02108 | opp_overlap 1652396, overlap 1652390 TGCACTCTGGCACAA GCGTGGC ACA GCCATGC TTTGCTTGTGGTGCG Atu1666 1652780 - 1653136 + | hypothetical protein Atu1667 1653073 - 1653306 + | hypothetical protein TERM 1967 1653342 - 1653315 - f 100 -10.5 -4.89477 | gap 1 CTTCTAATAATAAAA CGC-GCCGCCGC TCATT GCGGCGGATGCG AAGACGACTTCCCCA TERM 1968 1653385 - 1653362 - f 87 -8 -4.57569 | opp_overlap 1653362 CGACTTCCCCAAAAA GGCCTGAGGC TCCC GTCTCTGGCC TTTTTTCGTTTGGGC TERM 1969 1653362 - 1653385 + F 100 -10.2 -5.37593 | opp_overlap 1653362 CGACTTCCCCAAAAA GGCCTGAGGC TCCC GTCTCTGGCC TTTTTTCGTTTGGGC Atu8161 1653758 - 1653901 + | hypothetical protein TERM 1970 1653947 - 1653911 - f 70 -6.6 -4.14392 | gap 2 CGCTAAGGCGTAAAA GATCGTCCCGCTGCCCGA CCT CCAGG--GCGCGACGATC GAGCGACAGGTTTTA TERM 1971 1653969 - 1653985 + F 100 -15.1 -4.8622 | opp_overlap 1653969 CAGGTTTTAAGAAAA CGGCGCC TCT GGCGCCG TTTTTGATTCCGGGG TERM 1972 1653985 - 1653969 - f 100 -15.1 -4.63932 | opp_overlap 1653969 CAGGTTTTAAGAAAA CGGCGCC TCT GGCGCCG TTTTTGATTCCGGGG TERM 1973 1654077 - 1654051 - f 83 -14.6 -2.79796 | CGGCATCGCAGCATA TTTCTTCTCGCC AGC GACGAGAAGAAA CAAGCGGCATGCGCT TERM 1974 1654094 - 1654078 - f 71 -5.8 -4.35885 | AGCGACGAGAAGAAA CAAGCG GCATG CGCTCG ATCCATAACGCCAAT gidA 1654279 - 1655724 + | tRNA (uracil-5-)-methyltransferase Gid TERM 1975 1655778 - 1655755 - f 93 -12.4 -4.33819 | opp_overlap 1655756, overlap 1655756 ATCAGCCAGAATAAA GGGGCGTGTG ACCG CACACGCCCT TTTTCCATTCCGGGT TERM 1976 1655756 - 1655777 + F 100 -15.9 -4.74103 | opp_overlap 1655755 1655756 TCAGCCAGAATAAAG GGGCGTGTG ACCG CACACGCCC TTTTTCCATTCCGGG TERM 1977 1655777 - 1655756 - f 100 -15.9 -3.19568 | opp_overlap 1655756, overlap 1655755 TCAGCCAGAATAAAG GGGCGTGTG ACCG CACACGCCC TTTTTCCATTCCGGG TERM 1978 1655787 - 1655800 + F 81 -8.1 -4.27316 | overlap 1655799 ACGCCCTTTTTCCAT TCCGG GTCA CCGGA TTTTGCCTTGCCCGG TERM 1979 1655799 - 1655837 + F 80 -4.5 -5.02715 | gap 1, overlap 1655787 1655801 CATTCCGGGTCACCG GATTTTGCCT-TGCCCGG CCAG CCGCGCTCGGGCAAAACC TTTTTACTTTGATAT adhC 1655875 - 1657002 + | alcohol dehydrogenase class III TERM 1980 1657013 - 1657042 + F 95 -14.9 -3.16191 | opp_overlap 1657014 ATTGATTCCAGACGA AGGTGGGCGCGCC TGAC GGTGCGCCCGCCA TTCATGCAAATGTGA TERM 1981 1657041 - 1657014 - f 95 -14 -3.27022 | opp_overlap 1657013 TTGATTCCAGACGAA GGTGGGCGCGCC TGAC GGTGCGCCCGCC ATTCATGCAAATGTG Atu8112 1657168 - 1658025 + | hypothetical protein TERM 1982 1658174 - 1658152 - g 72 -2.6 -4.86731 | overlap 1658157 CGTGGCGAAAGAAAA TGAAATCGAC GTT GCCGACACCA TTTATTCCTACCTTG TERM 1983 1658169 - 1658157 - g 71 -5.5 -4.37871 | overlap 1658152 CGAAAGAAAATGAAA TCGAC GTT GCCGA CACCATTTATTCCTA Atu8162 1658132 - 1658395 + | hypothetical protein TERM 1984 1658832 - 1658801 - g 71 -6.5 -4.1899 | gap 2, overlap 1658789 1658784 1658802 TCACGGCACGCAAAA GCGCGCCCGCCCGCC CTTC GGCG-GCGATCG-GC GAAGACCTCGCGGCC TERM 1985 1659422 - 1659409 - g 79 -9.5 -4.26189 | opp_overlap 1659408 1659407 GGACAAAGGGCAAAA CCGGG CGAG CCCGG CATTCTCGTGCATCG fadD 1658392 - 1659924 + | long-chain fatty acid-CoA ligase TERM 1986 1659992 - 1659979 - f 74 -6.7 -4.22652 | CGATATCAGCGAAAA CGATC TATT GATCG GCGGACTTTCGGTGC TERM 1987 1660355 - 1660338 - g 75 -7.7 -4.16284 | gap 1 AGAGTGCGGAAGAAA TCGCC-CG TAT CGAGGCGA TCAACAGGCCGGTCA lysA 1660004 - 1661185 + | diaminopimelate decarboxylase Atu1674 1662040 - 1661357 - | hypothetical protein TERM 1988 1662149 - 1662130 - H 77 -7.2 -4.28994 | gap 1 GAGTAGCGACTAAAA TTCGTACCG TTT CGGT-CGAA AAAATCATTAAACTA TERM 1989 1663301 - 1663281 - g 71 -7.6 -4.07568 | gap 1, opp_overlap 1663281, overlap 1663282 GCGTGTTCGCCAAAA CTGGCCTGA ACGA TCAGGCC-G ATCTCGTCGCGTTTC Atu1675 1662248 - 1663345 + | transcriptional regulator pabB 1664384 - 1663350 - | para-aminobenzoate synthase component I TERM 1990 1664427 - 1664406 - R 82 -5 -5.01732 | opp_overlap 1664416 AAGCGCGGTAAAAAA CGCCTCGG GCTCGT CCGCGACG ATGATTTCCTCCGGC TERM 1991 1664438 - 1664467 + r 83 -15 -2.66316 | overlap 1664435 CGACGATGATTTCCT CCGGCTCGGTGA AGGCTG TCACCGTGCCGG TCGTGTCATCCCGGA tgt 1665675 - 1664545 - | queuine tRNA-ribosyltransferase TERM 1992 1665632 - 1665599 - G 73 -13.7 -2.78384 | opp_overlap 1665590 1665587 GGCGTGCGGATGACA CCGCGCGGCATGGCG ACTT CGCCAAGGCGCGCGC CGCCGCTCGTGGATT queA 1666775 - 1665675 - | S-adenosylmethionine:tRNA ribosyltransferase-isomerase TERM 1993 1666176 - 1666194 + g 72 -11.6 -3.29144 | opp_overlap 1666162 1666166 ATGCAGCCCGGCGGT GGGGGCGG CAA CCGCACCC TTCTCGCGGGCGTAA TERM 1994 1666826 - 1666802 - R 87 -8.6 -4.55826 | gap 2 TCGAAAATATCAAAA CCCGCC-C-TGC ATG GCATGGGGCGGG TGGAAGGTGGTGACA TERM 1995 1667001 - 1666978 - R 100 -16 -3.67976 | opp_overlap 1666983 GTCACCAATGTGAAA CGCCCCGCAG TTTC CTGCGGAGCG GGTAAATACGTTATA ppiB 1667534 - 1667025 - | peptidyl prolyl cis-trans isomerase ppiB 1668140 - 1667571 - | peptidyl prolyl cis-trans isomerase coaD 1668664 - 1668170 - | phosphopantetheine adenylyltransferase TERM 1996 1668777 - 1668824 + G 100 -12.3 -4.90778 | gap 3, opp_overlap 1668758, overlap 1668779 1668786 CCACAACCGGAAGGG TGGC-GTGAA-CCGCGCATGAACG GGC CGTTCA-GTGCGGTTTCACAGCTA TTTTGTTTAAATGCA TERM 1997 1668779 - 1668822 + G 89 -12.7 -4.07285 | gap 3, opp_overlap 1668758, overlap 1668777 1668786 ACAACCGGAAGGGTG GC-GTGAA-CCGCGCATGAACG GGC CGTTCA-GTGCGGTTTCACAGC TATTTTGTTTAAATG TERM 1998 1668786 - 1668813 + G 82 -12.8 -3.58731 | gap 1, overlap 1668779 1668777 GAAGGGTGGCGTGAA CCGCGCATGAACG GGC CGTTCA-GTGCGG TTTCACAGCTATTTT Atu1682 1668693 - 1668875 + | hypothetical protein Atu1683 1669058 - 1669282 + | hypothetical protein TERM 1999 1669464 - 1669446 - f 81 -11.7 -3.54741 | opp_overlap 1669459 GACGATCCGTCGAAA CCGCGCT TTCTG AGCGCGG CGGATCGGCCTCAGC TERM 2000 1669459 - 1669481 + F 75 -6.1 -4.64598 | opp_overlap 1669446 AACCGCGCTTTCTGA GCGCGGCGG ATCGG CCTCAGCGC TTTTTAAAATGATTC TERM 2001 1669504 - 1669524 + F 100 -14.7 -5.09259 | AATGATTCTTCGTAA CCGCCTGGA CCC TCCGGGCGG TTTTATTTTGCCGTC Atu1685 1669561 - 1669713 + | hypothetical protein ppiD 1669727 - 1671619 + | peptidyl-prolyl cis-trans isomerse D trpD 1671634 - 1672662 + | anthranilate phosphoribosyltransferase TERM 2002 1673301 - 1673283 - g 70 -10.2 -3.53343 | overlap 1673293 AAGTCGGCCTCGAAA CCAGCGAG AAG CTCGCAGG CCTCGTGCCGGCCGA trpC 1672673 - 1673488 + | indole-3-glycerol-phosphate synthase TERM 2003 1673976 - 1673945 - g 80 -10.3 -4.07568 | gap 2, overlap 1673947 CCGTCTTCTCGAAAA GAGCGGCGGCAAATC CGGT GATTT-CCGCCGC-C AGGAGAGCTGAATGA TERM 2004 1673975 - 1673947 - g 88 -14 -3.63744 | gap 1, overlap 1673945 GTCTTCTCGAAAAGA GCGGCGGCAAATC CGGT GATTT-CCGCCGC CAGGAGAGCTGAATG moaC 1673496 - 1673987 + | molybdenum cofactor biosynthesis protein C moeA 1673988 - 1675205 + | molybdopterin biosynthesis protein TERM 2005 1675375 - 1675362 - f 75 -5.9 -4.5448 | overlap 1675373 GAGGGATAAAAATAA CCGCC TTAA AGCGG AGTCTCGCCGGCGCC Atu1691 1675687 - 1676757 + | GGDEF family protein Atu1692 1677506 - 1676898 - | hypothetical protein kefB 1679366 - 1677558 - | glutathione-regulated potassium-efflux system protein Atu1694 1680027 - 1679659 - | hypothetical protein moaA 1680160 - 1681209 + | molybdenum cofactor biosynthesis protein A TERM 2006 1682014 - 1682028 + G 74 -11.4 -3.45023 | CCATCGTATCGCATC TGGCCG GTT CGGCCA TTCTGGTGCTGGTCG Atu1696 1681377 - 1682345 + | hypothetical protein TERM 2007 1683247 - 1683270 + G 72 -2.3 -4.73388 | gap 1, opp_overlap 1683246, overlap 1683248 ATCGCGCTGATAACC GGCG-GGGCG GAAAG CGCCTACGCG TTTTTCGTGCCGCTT Atu1697 1682347 - 1683546 + | MFS permease mobA 1683543 - 1684199 + | molybdopterin-guanine dinucleotide biosynthesis protein A mobB 1684196 - 1684711 + | molybdopterin-guanine dinucleotide biosynthesis protein B TERM 2008 1684788 - 1684756 - T 100 -10.6 -5.19328 | opp_overlap 1684756 1684763, overlap 1684763 AGCCGACAATAAAAA TGAAAAAGCCGGGC TCATC ACCCGGCTTCATCA TTCCTTGAGAACGCA TERM 2009 1684781 - 1684763 - T 100 -9.5 -5.24003 | opp_overlap 1684763 1684756, overlap 1684756 AATAAAAATGAAAAA GCCGGGC TCATC ACCCGGC TTCATCATTCCTTGA Atu1700 1686421 - 1684808 - | lipoprotein TERM 2010 1685207 - 1685219 + g 84 -6.2 -4.89852 | TTCCGGAGCGATGGA GGCC ATGTC GGCC TTTTTCTCGATATCA pcm 1687363 - 1686722 - | protein-L-isoaspartate O-methyltransferase surE 1688142 - 1687372 - | stationary phase survival protein SurE TERM 2011 1688224 - 1688244 + r 76 -12.6 -2.79796 | GTTCTCTCAACGTCA TCCTCGGG CCTGT CCCGAGGA TCTAATCACGTCCAA serS 1689638 - 1688355 - | seryl-tRNA synthetase TERM 2012 1689702 - 1689683 - R 100 -12.8 -4.34402 | opp_overlap 1689696 1689696, overlap 1689696 CGTTTTACAGCAAAA CGCCGGGC ATGA ACCCGGCG CGAGGATTTTTTGAG tatC 1690541 - 1689738 - | SEC-independent protein translocase protein tatB 1691278 - 1690538 - | sec-independent translocase tatA 1691544 - 1691332 - | twin argininte translocase protein A Atu1707 1692322 - 1691672 - | hypothetical protein Atu1708 1693244 - 1692399 - | hypothetical protein Atu1709 1694319 - 1693303 - | glycosyl hydrolase TERM 2013 1694480 - 1694460 - R 85 -12.6 -3.56594 | CGAAACGTCGGCAAA TCCTCGGC ACAAG GCCGAGGA TGACGTCGCGTGTGA Atu1710 1697593 - 1694567 - | hypothetical protein argS 1699417 - 1697660 - | arginyl-tRNA synthetase TERM 2014 1699357 - 1699379 + g 91 -7.6 -4.78107 | opp_overlap 1699362 CGCGGTTCTCTTTCA CGAGATCGAG GGT CTCGAGCGCG TTTTTGATCCTGGTA dgt 1700709 - 1699492 - | deoxyguanosinetriphosphate triphosphohydrolase-like protein TERM 2015 1700638 - 1700625 - G 79 -8.1 -4.56597 | CGGCCTCGGGAAAAA GACGC CCGC GCGTC GTCCATGGATCCGAG Atu1713 1700924 - 1701256 + | hypothetical protein TERM 2016 1701284 - 1701264 - f 74 -11.1 -3.21747 | opp_overlap 1701260 1701279 CGATTTGACTAGGAA TGACGCGCG GAC CGTGCGTCA AACGCTTTCGGTACT TERM 2017 1701626 - 1701608 - g 71 -6.6 -4.18018 | GGCGCGTATCGAAAA CCTCTGCC AGT GGCTGAAG GATTCCTCGCCTGAC TERM 2018 1701947 - 1701959 + G 70 -10.5 -3.53811 | GCTTGCCTGGATGGA GCGCC TGC GGCGC TTTGCGGAAGATCGC Atu1714 1701558 - 1702355 + | exonuclease III exoR 1703192 - 1702398 - | exopolysaccharide production negative regulator Atu1716 1703496 - 1703179 - | hypothetical protein TERM 2019 1703705 - 1703726 + r 91 -10.1 -4.64861 | opp_overlap 1703705 TCGCGCATGAAAAAA GGCCCGGTT GGTA AACCGGACC TTTATTTTAGAACAA TERM 2020 1703726 - 1703705 - R 100 -12.3 -5.14563 | opp_overlap 1703705 TCGCGCATGAAAAAA GGCCCGGTT GGTA AACCGGACC TTTATTTTAGAACAA fadL 1705033 - 1703756 - | long-chain fatty acid transport protein TERM 2021 1705280 - 1705315 + r 100 -5.4 -5.52909 | CACAGTGGATAGTTT CCGGGAAAAACGGGCT TATC GGGCCGTTTTTATTGG TTTTTTTCGATCTTC TERM 2022 1705426 - 1705457 + r 84 -9.4 -4.36554 | opp_overlap 1705431, overlap 1705431 GGAACTGACAAAACA TAAAAGCGCCCCGT TGGT ACGGAGCGCTTTCG TTTATTCTGGTCATC TERM 2023 1705452 - 1705431 - R 100 -13.7 -4.94487 | opp_overlap 1705431 1705426 TGACAAAACATAAAA GCGCCCCGT TGGT ACGGAGCGC TTTCGTTTATTCTGG TERM 2024 1705431 - 1705452 + r 91 -11.5 -4.24422 | opp_overlap 1705431, overlap 1705426 TGACAAAACATAAAA GCGCCCCGT TGGT ACGGAGCGC TTTCGTTTATTCTGG valS 1708330 - 1705487 - | valyl-tRNA synthetase TERM 2025 1707331 - 1707344 + g 70 -4.5 -4.45544 | overlap 1707334 GATGGCTGAGGCCCT CGAGG AAAT CTTCG TTTTCCTTGATGGAG TERM 2026 1708499 - 1708478 - R 100 -13 -5.45652 | opp_overlap 1708478 1708475 1708490 ATCTTCAACAAAAAA GCCGCTCC CATGCC GGAGCGGC TCCTGTTTCATCGCA TERM 2027 1708478 - 1708499 + r 79 -13 -2.87501 | opp_overlap 1708478, overlap 1708475 1708490 ATCTTCAACAAAAAA GCCGCTCC CATGCC GGAGCGGC TCCTGTTTCATCGCA Atu1720 1709550 - 1708549 - | hypothetical protein TERM 2028 1709915 - 1709891 - R 100 -17.9 -5.24531 | overlap 1709877 ACCGGCCACAAAAAA GCCGGGGTGAA AAA TCCACCCCGGC CCTGCAAAAAACGAT pcm 1710612 - 1709941 - | protein-L-isoaspartate O-methyltransferase TERM 2029 1710545 - 1710526 - G 70 -3.5 -4.59773 | overlap 1710542 CGGCACGCTCAAAAA CGCCTTC AGCACG GAATGCG ACGTCACGTCGGTCG Atu1722 1710991 - 1710797 - | hypothetical protein TERM 2030 1711182 - 1711237 + H 74 -2.1 -5.0133 | overlap 1711183 1711186 1711188 TTATTCAAGCGATGG CG-GGCATTTAGAACGAATCCATTTTG GGCG CAAGA-GGCTTCGTTCTGAATGTGGTG TTTTTTCGAACCGTA TERM 2031 1711186 - 1711232 + H 76 -11.9 -3.08977 | gap 1, overlap 1711183 1711182 1711188 TCAAGCGATGGCGGG CATTTAGAACGAATCCATTTTG GGCG CAAGA-GGCTTCGTTCTGAATG TGGTGTTTTTTCGAA TERM 2032 1711371 - 1711332 - H 100 -13.7 -4.32579 | gap 2, opp_overlap 1711332 1711365, overlap 1711335 ATATTTCAGAAGAAA CAATGCCCGCATAGCGCGC GTCT GCG-GCAATGCGGGCAT-G ACGTATTCCCTTGGG TERM 2033 1711369 - 1711335 - H 100 -16.5 -4.27512 | gap 1, opp_overlap 1711332 1711365, overlap 1711332 TTTCAGAAGAAACAA TGCCCGCATAGCGCGC GTCT GCG-GCAATGCGGGCA TGACGTATTCCCTTG Atu1724 1711857 - 1712057 + | hypothetical protein Atu1725 1712280 - 1712585 + | hypothetical protein Atu1726 1713082 - 1712915 - | hypothetical protein Atu1727 1713422 - 1713171 - | hypothetical protein TERM 2034 1713392 - 1713410 + g 100 -12.4 -4.89063 | opp_overlap 1713392 CCGGCGCAAAGAAAA TGCGGCCT TCT GGGCCGCA TTTCTTTTTCAATCA TERM 2035 1713410 - 1713392 - G 100 -11.7 -4.86731 | opp_overlap 1713392 CCGGCGCAAAGAAAA TGCGGCC TTCTG GGCCGCA TTTCTTTTTCAATCA wrbA 1714033 - 1713434 - | TrpR binding protein WrbA TERM 2036 1713554 - 1713566 + g 73 -10.5 -3.56704 | overlap 1713549 GGTGGAAGCGCCATA GGGCG AAC CGCCC TTGATTTCATCGACA TERM 2037 1714245 - 1714235 - H 74 -3.2 -4.89339 | overlap 1714239 AACCATTTACAAAAA GACA TTT TGCC AAAACCGCTTTGCAT Atu1729 1714310 - 1715101 + | putative molybdenum cofactor biosynthesis protein TERM 2038 1715552 - 1715586 + G 75 -2.8 -4.99043 | overlap 1715553 CGCCAGAGCAGCTCG TCGGCACTGTCCGA CAGTCGC TCGGATATTGACGG TTTTCTTTATGAAAG Atu1730 1715189 - 1716034 + | hypothetical protein TERM 2039 1716066 - 1716038 - f 75 -5.8 -4.56597 | overlap 1716039 1716042 CTGTCGCGTTAAAAA CGGATGCGGCGC AAACA GCGCCGCAATCT CCCGCTCTCGCCTTT TERM 2040 1716062 - 1716042 - f 83 -14 -2.83903 | overlap 1716039 1716038 CGCGTTAAAAACGGA TGCGGCGC AAACA GCGCCGCA ATCTCCCGCTCTCGC TERM 2041 1716492 - 1716519 + G 76 -15 -2.54325 | gap 1, opp_overlap 1716498, overlap 1716491 1716489 1716498 CGGCGCTGGAAGTGC GCGAAATGCTGCC GAG GGC-GCATTTCGC CTGTGTTTACGCCAA TERM 2042 1716579 - 1716593 + G 76 -5.6 -4.68908 | opp_overlap 1716579, overlap 1716580 TTGTCACTGAAGTCA GCCAGG ACA CCTGGA TTTATTTTCCCTGGG gpt 1716161 - 1716658 + | xanthine-guanine phosphoribosyltransferase TERM 2043 1716710 - 1716691 - f 70 -7 -4.07885 | opp_overlap 1716692 1716709, overlap 1716692 TATCCGCTCTTAAAA GCCGCCCC ACCG AGGGCGGT TTTTTGTGGAGAAAC TERM 2044 1716692 - 1716709 + F 100 -9.8 -5.24129 | opp_overlap 1716692 1716691 ATCCGCTCTTAAAAG CCGCCC CACCGA GGGCGG TTTTTTGTGGAGAAA TERM 2045 1716784 - 1716799 + F 77 -7.5 -4.37198 | CGCCATTATGCCTCA CCCCG GAAATG CGGGG TTTTGCCTTTCCGTT TERM 2046 1720369 - 1720353 - g 76 -12.3 -3.39803 | overlap 1720358 CATCGACATGCACAA GGAAGGC GCC GCCTTCC GGGCGATGATGAACA TERM 2047 1720983 - 1720959 - g 86 -14.9 -3.28712 | CCTCTTCTCCGACAA GGCCGCCGCCG ACG CGGCATCGGCC AAGGCGGAAGCCAAG TERM 2048 1721028 - 1721010 - g 81 -8.1 -4.61824 | overlap 1721015 CAAGAAGAAGGAAAA CGAACGC CGCAT GCGCTCG ATCGCGCAGGGCTAT nrdE 1717324 - 1721142 + | ribonucleotide-diphosphate reductase subunit alpha TERM 2049 1721221 - 1721184 - f 81 -8.5 -4.2602 | overlap 1721181 1721188 1721191 CACACGAAGAAATAA CTAAGAACTGGCCAATA AAAA TATTGGCCAGCTCGAAA CCTAAAATCAGTAAA TERM 2050 1721217 - 1721188 - f 100 -15.9 -3.68979 | overlap 1721184 1721181 1721191 CGAAGAAATAACTAA GAACTGGCCAATA AAAA TATTGGCCAGCTC GAAACCTAAAATCAG TERM 2051 1721214 - 1721191 - f 100 -14 -3.94141 | overlap 1721188 1721184 1721181 AGAAATAACTAAGAA CTGGCCAATA AAAA TATTGGCCAG CTCGAAACCTAAAAT Atu1734 1721296 - 1721643 + | hypothetical protein TERM 2052 1721894 - 1721921 + G 70 -10.5 -3.49653 | gap 1, opp_overlap 1721889 ATTGGGAACAGGGCC GCAGCGAGCCGG ATCAA CCGGCCCGC-GC TTATCTGAAGATCAT Atu1735 1721701 - 1721988 + | hypothetical protein mntH 1723365 - 1721995 - | manganese transport protein MntH TERM 2053 1722387 - 1722363 - G 70 -10 -3.54475 | gap 1, overlap 1722378 TGCCGCAGCACAGAA GCGCC-ACGCC GAAC AGCGTCGGCGC TATGGCAAGGCCGAG TERM 2054 1722539 - 1722564 + g 70 -3.1 -4.58663 | opp_overlap 1722522 1722540, overlap 1722540 GCGATGGTGGAATCG AGCGTGGCG AATTTCAG CGCCTCGCG TTTTTCGGCAATGGT TERM 2055 1723217 - 1723207 - G 75 -2.4 -5.00616 | overlap 1723208 GCCGGGGCCAAAAAA GGCC ATT GCCC GGCGAAACGTGCTGG TERM 2056 1723925 - 1723909 - g 70 -10.1 -3.54543 | AGCCATCCTGGCAAA CCGGAGC CGA ACTCCGG CATCGTGGAGGAACA Atu1737 1723735 - 1723962 + | hypothetical protein Atu1738 1725712 - 1723979 - | ABC transporter, nucleotide binding/ATPase protein TERM 2057 1726819 - 1726849 + G 72 -11.1 -3.28261 | gap 1 GATCTATCTGGTCGC CAGCGGCTCGCCCG CCCA CGGGCTGGC-GCTG TTCGTCTGGGGTTCT Atu1739 1725944 - 1727182 + | permease TERM 2058 1727396 - 1727416 + T 76 -12.6 -2.80443 | ACACCATCGGCGTCA TCCTCGGC CCTGT GCCGAGGA TCTAATCACGTCTAA Atu1740 1728041 - 1727586 - | acetyltransferase Atu1741 1728149 - 1728562 + | hypothetical protein TERM 2059 1728678 - 1728626 - T 85 -11.2 -3.92324 | opp_overlap 1728626 1728660 1728663, overlap 1728621 1728627 1728663 TCCTCTAAGAGGAAA GCGCGCACCGCCCTCATTCCTGTG CTCGT CACAGGAATCCAGTCGACGCGCGT CTGCGCGACGGGAGG TERM 2060 1728677 - 1728627 - T 86 -14.7 -2.95073 | opp_overlap 1728626 1728660 1728663, overlap 1728621 1728626 1728663 CCTCTAAGAGGAAAG CGCGCACCGCCCTCATTCCTGTG CTCGT CACAGGAATCCAGTCGACGCGCG TCTGCGCGACGGGAG TERM 2061 1728660 - 1728697 + T 74 -7.5 -4.07568 | opp_overlap 1728627 1728626 1728663, overlap 1728663 CTGTGCTCGTCACAG GAATCCAGTCGACGCGC GTCT GCGCGACGGGAGGAGTC TTTTCAGCCCAAGGA Atu1742 1729980 - 1728826 - | hypothetical protein Atu1743 1730703 - 1730086 - | hypothetical protein Atu1744 1731284 - 1730703 - | nitroreductase family protein TERM 2062 1731435 - 1731448 + G 71 -5.9 -4.36914 | overlap 1731424 TCTGGCCATTGCGTT CGCCG CGAT TGGCG TTTTATCGCAAGCAG Atu1745 1731394 - 1732374 + | hypothetical protein TERM 2063 1732551 - 1732534 - T 100 -14.1 -5.80951 | opp_overlap 1732531 ATCGAAAACAAAAAA CGGCCCC CGAA GGGGCCG TCGTCATTTATCAGG thrS 1734565 - 1732562 - | threonyl-tRNA synthetase TERM 2064 1734274 - 1734258 - G 80 -3.6 -5.08088 | AAGTCGTAATAAAAA CCGTTC TCGAT GACCGG ACCGATCGTCACCTG Atu8091 1735216 - 1734692 - | hypothetical protein TERM 2065 1734914 - 1734880 - G 76 -12.8 -3.39749 | overlap 1734873 CGAATAATCCGAGAA CGTTCTCGTCAAGCGG CTC CCGCATGACCCGAACG CAGACGTCAGGCGGA TERM 2066 1735092 - 1735081 - G 80 -3.6 -5.0538 | CTTCAGCGCAAAAAA CCAG ATTT CCGG TCGCGACAAGTGTCT Atu1747 1735572 - 1735213 - | hypothetical protein nifU 1736022 - 1735576 - | NIFU-like protein TERM 2067 1736429 - 1736483 + G 70 -4.1 -4.63542 | gap 1, overlap 1736403 1736402 GCAGGAGAAAATCCC GCCCGCGA-AGGACTTCTGGATACGC CGAA GCGCGTCGCCAAGGCCTATCGCGAGC TTTTTGCCGGTTATG folE 1736303 - 1736929 + | GTP cyclohydrolase I TERM 2068 1736978 - 1736945 - f 77 -11.2 -3.60805 | ACATCGGACCGGAAA CTGTAGC-GCGGGTTT CCTG AAACCCGCTGCT-CAG ACAAAATTTTGGAGT hisI 1737056 - 1737508 + | phosphoribosyl-AMP cyclohydrolase TERM 2069 1738299 - 1738281 - g 73 -13.8 -2.78384 | CGCGGCCTCACCACA GGGCGGCG GCA CACCGCCC GCGGAAACGGCGCCG Atu1751 1737604 - 1738542 + | hypothetical protein Atu1752 1739057 - 1738623 - | hypothetical protein Atu1753 1739949 - 1739212 - | hypothetical protein TERM 2070 1740028 - 1740018 - H 100 -2.4 -5.95166 | opp_overlap 1740018 CCGAACGAAAAAAAA GCCG TCC CGCC TTTGTTGTACGCGAC TERM 2071 1740788 - 1740774 - g 71 -7.1 -4.25104 | GCCTGTCGATGAAAA GCAGC CGCCT GCTGC GAATGGACATCGCGC Atu1754 1740266 - 1740862 + | hypothetical protein TERM 2072 1741550 - 1741529 - g 79 -9.3 -4.24204 | CATCGAGATCGAAAA CCGCCCGCC GCTC GGCAGCCGG GTCCAGCTCGGCAAG Atu8163 1741044 - 1741661 + | hypothetical protein Atu1756 1742200 - 1741892 - | hypothetical protein Atu1757 1742384 - 1742992 + | hypothetical protein TERM 2073 1743035 - 1743067 + T 85 -12.8 -3.57144 | opp_overlap 1743041, overlap 1743041 CTCCGTCTCCCCAGA TAAAAAGCCGGCTC CGCAA GGGCCGGCTTTTCA TTTGCCGATGAACGC TERM 2074 1743061 - 1743041 - T 100 -10.4 -4.96848 | gap 1, opp_overlap 1743035 1743041 CTCCCCAGATAAAAA GCCGGCTCC GCAA GG-GCCGGC TTTTCATTTGCCGAT TERM 2075 1743041 - 1743061 + T 100 -11.8 -4.55128 | opp_overlap 1743041, overlap 1743035 CTCCCCAGATAAAAA GCCGGCTC CGCAA GGGCCGGC TTTTCATTTGCCGAT TERM 2076 1743099 - 1743119 + T 76 -12.6 -2.79796 | TGACACTCGACGTCA TCCTCGGG CCTGT CCCGAGGA TCTGATCACGTCCAA Atu1758 1743683 - 1743249 - | hypothetical protein sdaA 1745152 - 1743749 - | L-serine dehydratase TERM 2077 1744774 - 1744754 - G 71 -7.5 -4.14392 | overlap 1744757 GTCGAAGGCGGAAAA GATCATGCC GTT GGCATGGCC GGGCAGCGGGTTCTT TERM 2078 1745297 - 1745268 - g 100 -12.9 -4.54727 | opp_overlap 1745268 TGCCGGAAACGAAAA CAGCACGGTTTCC AGAG GAAAACCGCGCCG TTTCAAAACCCGTCA Atu1760 1745246 - 1745536 + | hypothetical protein Atu8164 1745806 - 1746156 + | hypothetical protein Atu1762 1746930 - 1746166 - | hypothetical protein TERM 2079 1746384 - 1746396 + g 73 -10.5 -3.5944 | opp_overlap 1746380 CGCGGGAGACACCGA CGCCG TTG CGGCG TTTCAGGCTGTCACT TERM 2080 1746989 - 1747016 + r 71 -9.8 -3.53012 | opp_overlap 1746989 TTCGGACAAAGAAAA GGCGCTACCCGG GTTT TTGGGTAACGCC TTTAAGGGAGGGGAG TERM 2081 1747016 - 1746989 - R 100 -10.6 -4.99043 | opp_overlap 1746989 TTCGGACAAAGAAAA GGCGCTACCC GGGTTTTT GGGTAACGCC TTTAAGGGAGGGGAG Atu8019 1747199 - 1747038 - | hypothetical protein Atu1763 1747392 - 1748168 + | hypothetical protein metF 1748259 - 1749179 + | methylenetetrahydrofolate reductase Atu1765 1750107 - 1749211 - | LysR family transcriptional regulator TERM 2082 1750448 - 1750470 + G 81 -6.3 -4.8543 | overlap 1750431 1750445 CCGTCGCCCAGCGGC TGGCTTGAT CGCCT ATCCAGCCA TTTTTCTGCCCGTTA Atu1766 1750385 - 1750603 + | hypothetical protein Atu1767 1750875 - 1751915 + | AraC family transcriptional regulator Atu1768 1753475 - 1752000 - | hypothetical protein TERM 2083 1753854 - 1753842 - g 81 -7.7 -4.72272 | overlap 1753853 TTTTCTCATGAAAAA GATCG AAG CGATC ATTAAGCCCTTCAAG glnB 1753834 - 1754172 + | nitrogen regulatory protein PII TERM 2084 1754185 - 1754205 + F 70 -9 -3.62572 | TAATCAGAACCAGGT CTCAAGCC GGGGA GGCTTGGG TTTCACCTCGTCATC glnA 1754245 - 1755654 + | glutamine synthetase TERM 2085 1755664 - 1755686 + F 100 -17 -3.05463 | GCCTGATCTAACTTC GGAGCGCTCC CTT GGGGCGCTCC TTCCATGCCGGCGGT TERM 2086 1755695 - 1755720 + F 100 -15.5 -5.07652 | GCGCTCCTTCCATGC CGGCGGTTTTC CCTG GAAAGCCGCCG TTTTCTTTTGAAGCC TERM 2087 1755808 - 1755818 + G 70 -4.6 -4.52873 | ACTGGCTCATCTTTC TGGC GGT GCCG TTCTTTTTCTCCAGC TERM 2088 1755861 - 1755874 + G 77 -8.1 -4.37658 | overlap 1755849 GGCCGCGGCGTCGTT GGCGA AGTC TCGCC TTTTATCGCCGCCTT TERM 2089 1756465 - 1756475 + G 78 -4.6 -4.78572 | TCATCCTCTTCGCCT CGCT TCT GGCG TTTTATTGCTTCACC Atu1771 1755753 - 1756673 + | hypothetical protein Atu8165 1756761 - 1757090 + | hypothetical protein TERM 2090 1757138 - 1757167 + T 81 -13.7 -2.97365 | opp_overlap 1757143, overlap 1757143 ATAAAGCGCGCATAA AAAAACCGGTCTG TTGC CAGACCGGTTTTG TCATTCTTGATGCTT TERM 2091 1757143 - 1757162 + T 100 -13.6 -4.61747 | opp_overlap 1757143, overlap 1757138 GCGCGCATAAAAAAA CCGGTCTG TTGC CAGACCGG TTTTGTCATTCTTGA TERM 2092 1757162 - 1757143 - T 100 -13.6 -5.60993 | opp_overlap 1757138 1757143 GCGCGCATAAAAAAA CCGGTCTG TTGC CAGACCGG TTTTGTCATTCTTGA Atu1773 1757847 - 1757191 - | hypothetical protein TERM 2093 1758129 - 1758110 - H 71 -7.2 -4.0044 | gap 1 AATCATGACGATAAA CCGGTTGTG ACG CA-AACCGG ACGGACAGTTAGACA Atu1774 1758155 - 1760002 + | ABC transporter, substrate binding protein (peptide) Atu1775 1760041 - 1760709 + | polyketide biosynthesis associated protein TERM 2094 1760973 - 1760985 + G 91 -5.5 -5.40474 | GACGAACCGCCCCTT GTGGA TCA TCCGC TTTTTTTCCGCCGGT TERM 2095 1761304 - 1761291 - g 85 -2.4 -5.44119 | opp_overlap 1761303 CCCATCGGAAAAAAA CGTA TCACTC TACG GCGCCGGCGTTCTCG Atu1776 1760890 - 1761693 + | hypothetical protein TERM 2096 1761740 - 1761715 - T 100 -18.3 -3.45434 | AAGAATGCATTAGAA CCGGCGACGCG TATT CACGTCGCCGG AATGGCATTCGATCA Atu1777 1762097 - 1761753 - | hypothetical protein Atu8020 1762476 - 1762198 - | hypothetical protein mfd 1765991 - 1762494 - | transcription-repair coupling factor TERM 2097 1763975 - 1763954 - G 72 -10.9 -3.28712 | gap 1, opp_overlap 1763941, overlap 1763939 1763938 GCTGCCGCGCCAGAA GC-GTCGTCG GCA CGACGACCGC CACCTGCACGCCGTT TERM 2098 1764212 - 1764167 - G 74 -11 -3.54935 | CAAATTCGTCGTAAA GCCCGTCCGGTGCGATAAGC GCCGGT GCGTGGCGCACCAGACGTGC TGCCGCAATGCGAAT TERM 2099 1764648 - 1764662 + g 78 -2.8 -5.10077 | overlap 1764643 AACCGCGCAAGCCGC CTCG CCCTTTC CGAG TTTTTTCACCTCTTT Atu1779 1766306 - 1765995 - | hypothetical protein recG 1766494 - 1768599 + | ATP-dependent DNA helicase TERM 2100 1768768 - 1768747 - g 74 -7.1 -4.29977 | overlap 1768760 AAACAATTCAAGAAA CCCGGCCGC AAGA GCGCCTGGG CGCAGGCGCTGGAAG TERM 2101 1768777 - 1768760 - g 72 -12.7 -3.02043 | overlap 1768747 AACCCGGCCGCAAGA GCGCCTG GGCG CAGGCGC TGGAAGAAGGCTGGA Atu1781 1768612 - 1768884 + | hypothetical protein Atu1782 1769202 - 1768912 - | hypothetical protein Atu1783 1769444 - 1769199 - | hypothetical protein Atu1784 1770232 - 1769564 - | hypothetical protein Atu1785 1770749 - 1770246 - | acetyltransferase TERM 2102 1770292 - 1770280 - G 71 -6.9 -4.27192 | overlap 1770287 AAACCCGGATGAAAA CCGAC AAT GCCGG ATGGAGTTCCGCCAT glmS 1772572 - 1770746 - | D-fructose-6-phosphate amidotransferase TERM 2103 1771270 - 1771286 + g 81 -7.9 -4.63486 | overlap 1771268 GCGGCATCTCGATCA GCTGCTG CAC CAGCTGC TTTTCTTCACCCGGT glmU 1774138 - 1772777 - | UDP-N-acetylglucosamine pyrophosphorylase TERM 2104 1773934 - 1773917 - G 74 -12.7 -3.14132 | TTCCTTCTGCAGGAA GGCCTCC ACCT GGAGGCC CTTGAGACTTGCAGC Atu1788 1775082 - 1774345 - | GntR family transcriptional regulator TERM 2105 1774621 - 1774602 - G 73 -10.8 -3.62224 | ACATTTCGGTAATAA GGACATGA AAAT TCATGTCC GCAATCGCCCGCTTT TERM 2106 1775275 - 1775234 - R 100 -16.1 -4.34771 | gap 1, opp_overlap 1775241, overlap 1775237 TAAAACGTATGAAAA TAA-GCAAGGCCGCACATGA GTT TCATGTGCGGCCTTTCATCA GTAATGGAAGAGAAT TERM 2107 1775271 - 1775237 - R 100 -21.6 -4.2693 | opp_overlap 1775241, overlap 1775234 AACGTATGAAAATAA GCAAGGCCGCACATGA GTT TCATGTGCGGCCTTTC ATCAGTAATGGAAGA TERM 2108 1775241 - 1775267 + r 100 -21 -3.77196 | opp_overlap 1775237 1775234 TATGAAAATAAGCAA GGCCGCACATGA GTT TCATGTGCGGCC TTTCATCAGTAATGG Atu1789 1776369 - 1775296 - | lipoprotein Atu1790 1777331 - 1776408 - | ABC transporter, membrane spanning protein (sugar) Atu1791 1778419 - 1777328 - | ABC transporter, membrane spanning protein (sugar) TERM 2109 1778382 - 1778398 + g 73 -4.4 -4.60041 | gap 1, opp_overlap 1778380, overlap 1778379 AGCAGGGTGAAAAGC CGGG-AG ACCC CTGCCCG TTTTTCAAGCTCAAT Atu1792 1779953 - 1778409 - | ABC transporter, nucleotide binding/ATPase protein (sugar) TERM 2110 1779270 - 1779286 + g 73 -9.3 -3.90291 | opp_overlap 1779268 GCCGACCATCATACG CGCCAGC GAT GCCGGCG TTTCCTTGCGCGGAT pcs 1780905 - 1780180 - | phosphatidylcholine synthase ubiH 1781116 - 1782324 + | 2-octaprenyl-6-methoxyphenyl hydroxylase TERM 2111 1782348 - 1782331 - T 70 -5.5 -4.49556 | overlap 1782332 GCTGGATGAAATAAA CCACGCC CGTC AGCGTGA AGACCGACAGCACCG Atu1795 1783246 - 1782308 - | malonate transporter TERM 2112 1783146 - 1783168 + g 91 -7.6 -4.77165 | ATGAAGGTATTCAGC CAGCCCATCG CCT CGACCGGCTG TTTTGTTATGCGCGC ccdA 1783918 - 1783274 - | cytochrome c-type biogenesis protein TERM 2113 1784211 - 1784225 + r 85 -2.1 -5.53288 | gap 1 AAAAAAAACCGTATT GCGTGT CGAA AC-CGC TTTTTTTGGGTTGAC Atu1798 1785105 - 1784548 - | ankyrin repeat-containing protein TERM 2114 1785233 - 1785256 + r 75 -5.9 -4.65512 | GTTGTGTCTTACTGA TCAGCGGGC GCTGGG GTCCGCCGA TTTTCTACTTGTTTT Atu8021 1785368 - 1785261 - | hypothetical protein Atu1799 1786271 - 1785528 - | hypothetical protein TERM 2115 1785789 - 1785769 - G 70 -3.2 -4.63218 | gap 1, overlap 1785771 GCCGCCTTAAGAAAA CGCTCCGCA GCCC TGCGG-GAG ATGATGTAGCAGGCA Atu1800 1787559 - 1786405 - | hypothetical protein TERM 2116 1786991 - 1786981 - G 73 -4.6 -4.58395 | GGCACCGGCGAAAAA CGCC GCA AGCG TCAGGCTCCTGCCCT Atu1801 1787818 - 1787627 - | hypothetical protein TERM 2117 1787833 - 1787823 - R 76 -3.2 -5.0133 | opp_overlap 1787826, overlap 1787825 TATTCGCTCAAAAAA CCCT ACC AGGA ACCGGTATTCTGCAT gloA 1788265 - 1787825 - | lactoylglutathione lyase TERM 2118 1788252 - 1788264 + g 74 -3.3 -4.75472 | ACGCGAACCATCGTG TGCAG ATA CCGCA TTTTATTCCTCTCCA cspA 1788458 - 1789036 + | cold shock protein TERM 2119 1789061 - 1789081 + F 95 -5.3 -5.42259 | opp_overlap 1789063 1789064, overlap 1789064 TGCGTCCCATGCTGA AAGGCGCCG TCA TGGCGCTTG TTTTTTTCACGCTAG TERM 2120 1789064 - 1789078 + F 93 -9.2 -4.79949 | opp_overlap 1789064 1789063, overlap 1789061 GTCCCATGCTGAAAG GCGCCG TCA TGGCGC TTGTTTTTTTCACGC Atu1804 1789072 - 1789518 + | hypothetical protein TERM 2121 1789567 - 1789546 - T 79 -13.7 -2.71011 | ATTGTGTCTGAATGA GCCGGACGA CCTG TCGCCCGGC TGGCGCAATAATTAG Atu1805 1789827 - 1789579 - | hypothetical protein TERM 2122 1789856 - 1789870 + H 81 -7 -4.75472 | opp_overlap 1789857, overlap 1789857 CTTATGGACACAACA ACGCCC CAA GGGCGG TTTTGTTCATCTCCG TERM 2123 1789857 - 1789869 + H 73 -10.5 -3.4456 | opp_overlap 1789857, overlap 1789856 TTATGGACACAACAA CGCCC CAA GGGCG GTTTTGTTCATCTCC TERM 2124 1789869 - 1789857 - H 80 -10.5 -3.8969 | opp_overlap 1789856 1789857 TTATGGACACAACAA CGCCC CAA GGGCG GTTTTGTTCATCTCC Atu8166 1790041 - 1790310 + | hypothetical protein TERM 2125 1790337 - 1790355 + F 100 -10.3 -4.86731 | CGTCATGATGATTGA GCCCTTC TTCAT GAAGGGC TTTTCTTTGCGCGAG TERM 2126 1791211 - 1791188 - g 70 -10.3 -3.53224 | CACTCGCCGCCGAAA TCGCCGAGG ACGCCG CCTCGACGA AGCTGGTGCGGAGCG ugcG 1790521 - 1791663 + | UDP-glucose:ceramide glycosyltransferase TERM 2127 1792116 - 1792093 - g 70 -4.5 -4.56775 | overlap 1792094 1792095 ACCGCCCTGCAAAAA CCGCCATGC AATCCG GCACGGCAA AGACCAATGTCTGGG Atu1810 1792062 - 1792367 + | hypothetical protein TERM 2128 1792712 - 1792698 - g 95 -3.4 -5.59879 | overlap 1792699 GAGAAAGAGAAAAAA CGCGAC CAC GCCGCC GGTCAGGAGCGTGAG Atu1812 1792668 - 1792880 + | hypothetical protein Atu1813 1793313 - 1792891 - | hypothetical protein TERM 2129 1793915 - 1793929 + G 73 -4.2 -4.64861 | opp_overlap 1793915 CTCAGGATGACAAAA GCTTGT TCT ACACGC TTTATTTTCAAGACC TERM 2130 1793929 - 1793915 - g 70 -4.2 -4.4891 | opp_overlap 1793915 CTCAGGATGACAAAA GCTTGT TCT ACACGC TTTATTTTCAAGACC Atu1814 1793404 - 1794459 + | epoxide hydrolase Atu8022 1794795 - 1794640 - | hypothetical protein TERM 2131 1794713 - 1794688 - G 90 -6.1 -5.24531 | gap 1 AGCCGCCACAAAAAA CGC-GACGACAG CCA CAATCGTCAGCG CCTTCTTCGCTTTCG TERM 2132 1794727 - 1794747 + g 75 -2.4 -5.00616 | overlap 1794729 CGCCTTCTTCGCTTT CGGCCCCA TCGGC TGGCGCGG TTTTTTCGGCGGCGC TERM 2133 1794990 - 1794980 - H 74 -8.2 -3.92869 | opp_overlap 1794978 1794980, overlap 1794981 GGACGGATGGACAAA CCGC AGA GCGG AAACAACCCTCTGTG Atu1815 1795033 - 1796331 + | HlyD family secretion protein Atu1816 1796346 - 1797065 + | ABC transporter, nucleotide binding/ATPase protein TERM 2134 1797634 - 1797622 - g 74 -6.9 -4.36914 | overlap 1797624 GTCCTCGCCAGAAAA GGCCA GTC CGGCC TCGGGGACGATCAGG Atu1817 1797055 - 1798263 + | hypothetical protein Atu1818 1798329 - 1798619 + | hypothetical protein TERM 2135 1798673 - 1798693 + T 76 -12.6 -2.80994 | ACCTCTCCTCCGTCA TCCTCGGG CTTGT CCCGAGGA TCTAATCACGTTGAG TERM 2136 1798801 - 1798789 - T 79 -3.3 -5.27206 | opp_overlap 1798797, overlap 1798791 CATACACAAGAAAAA TCTGC TTC GCCGA CGCACAGGGCGCGTT Atu1819 1799211 - 1798822 - | hypothetical protein Atu1820 1799706 - 1799323 - | hypothetical protein nifS 1800970 - 1799744 - | cysteine desulfurase TERM 2137 1800753 - 1800732 - G 76 -10.8 -3.72576 | CCGGCGTTGAGGAAA CGGCGCAC CTTTTC GCGCGCCG CCTCATAGGCGTCGG sufD 1802258 - 1800987 - | transport system TERM 2138 1801333 - 1801383 + g 72 -11.3 -3.28712 | gap 2, opp_overlap 1801343 1801346 AAAATGCCCTTTGCA CG-GTCGAACACCACGTTG-CGGAA CAC TTCCGCCGAGGTCGTGTTCGGCACG TTATGACCGAGAACC sufC 1803036 - 1802281 - | ABC transporter, nucleotide binding/ATPase protein TERM 2139 1803086 - 1803066 - R 72 -11.1 -3.06679 | opp_overlap 1803079 1803081 AACAGTGTGAGCGAA GGTGCGCGA GCG TCGCGCACT CAGGTGCGTATTTGG sufB 1804578 - 1803109 - | cysteine desulfurase activator complex subunit SufB TERM 2140 1804632 - 1804645 + r 70 -9.5 -3.42503 | opp_overlap 1804632 TTGTCAACGTATCAA GGCGG AAAG CCGCC TTATCCATCTTCGGG nifS 1805946 - 1804777 - | cysteine desulfurase TERM 2141 1805377 - 1805348 - G 76 -10.1 -3.81287 | gap 1 GAGAGGACGAGGAAA TCCGCATCGAGATC ATT GATATCGA-GCGGA ATGCGGCCCGCCGCC TERM 2142 1805974 - 1805987 + H 77 -3.8 -5.10208 | TCGCTCAATCTTATA TGCG CCAAAA CGCA TTTTTCTTGAAATTA Atu1826 1806158 - 1806835 + | hypothetical protein Atu1827 1808167 - 1807076 - | anhydro-N-acetylmuramic acid kinase tyrS 1808346 - 1809599 + | tyrosyl-tRNA synthetase TERM 2143 1809623 - 1809640 + T 100 -14.1 -5.07486 | CCAAACCTGCATCGA GGGCCGC GAAA GCGGCCC TTTTTATTGAAACTC Atu8167 1813027 - 1809644 - | putative transmembrane protein bcp 1813147 - 1813614 + | bacterioferritin comigratory protein Atu1831 1813632 - 1814456 + | hypothetical protein TERM 2144 1814890 - 1814876 - g 80 -10 -3.99917 | AAAAAAGTGGAGAAA CTGCTG GAA CAGCAG GCTGCGCTGACCTCG TERM 2145 1815093 - 1815083 - g 73 -4.6 -4.59773 | overlap 1815084 CCGCAGGCGGAAAAA GCCG CCG CAGC CGACAGACGGGCCGC TERM 2146 1815323 - 1815298 - g 73 -4.5 -4.71776 | overlap 1815299 GAAGATCGAAGAAAA CGGCACCGACG ATGT CGGCGGTCCCT ATGCCGCGCCTTTGG Atu1832 1814546 - 1815844 + | membrane protein associated metalloendopeptidase TERM 2147 1816298 - 1816261 - g 71 -8.3 -4.07885 | gap 1 GACGCTGCTCGAAAA GGGCC-GCGCACGCGCCA GAA TGCCGCGCACGCTGATCC TGGAGCCGACCCGCG TERM 2148 1816774 - 1816759 - g 74 -6.8 -4.33105 | gap 1, opp_overlap 1816759, overlap 1816760 TAAGGACTATGAAAA GCGC-GC CGT GCTGCGC GATCTGGTCCGTGCC Atu1833 1816064 - 1817575 + | ATP-dependent RNA helicase Atu1834 1817584 - 1818027 + | mutT like protein TERM 2149 1818238 - 1818217 - f 100 -10.1 -5.1101 | opp_overlap 1818217 GCACTATGTAAAAAA CCGCTCCAG TTTC CCGAAGCGG TTTGTACGTAATGAA TERM 2150 1818434 - 1818411 - f 100 -8.8 -5.12707 | overlap 1818402 1818412 GCAAATGCGAAAAAA CCGCGGACAG AAAC CTGCCCACGA CATGAAGCTTTATGT TERM 2151 1818433 - 1818412 - f 74 -10.1 -3.6654 | overlap 1818402 1818411 CAAATGCGAAAAAAC CGCGGACAG AAAC CTGCCCACG ACATGAAGCTTTATG Atu1835 1818645 - 1818839 + | hypothetical protein Atu1836 1818952 - 1819329 + | hypothetical protein TERM 2152 1819408 - 1819425 + F 83 -8.4 -4.49316 | opp_overlap 1819408 1819407 1819404 GCCTATTAAAACAAC GGCGTC CTGCCA GACGCC TTTCTTATTGATGAT Atu1837 1819512 - 1820042 + | transcriptional regulator TERM 2153 1820044 - 1820029 - f 74 -3.2 -4.84642 | CTGAAAGTAACAAAA GATCGG CAAG CTGATC CTCGACAGCGAGGCC TERM 2154 1820724 - 1820712 - g 71 -6.9 -4.25104 | opp_overlap 1820696 GTCGCTGGAGGAAAA CGGCC TCA AGCCG ACGTTTTCCGATACG Atu1838 1820179 - 1821258 + | ABC transporter, substrate binding protein (amino acid) rpe 1821390 - 1822067 + | ribulose-phosphate 3-epimerase Atu1840 1822138 - 1822644 + | hypothetical protein purB 1822726 - 1824033 + | adenylosuccinate lyase Atu1842 1824104 - 1824667 + | hypothetical protein purC 1824862 - 1825626 + | phosphoribosylaminoimidazole-succinocarboxamide synthase purS 1825681 - 1825923 + | phosphoribosylformylglycinamidine synthase subunit PurS TERM 2155 1826563 - 1826549 - g 72 -12.8 -3.09681 | GAAAACCTCATCGAA GCCGCC CAT GGCGGC AATGACGGCCGCGGC purQ 1825991 - 1826614 + | phosphoribosylformylglycinamidine synthase subunit I TERM 2156 1826622 - 1826640 + F 100 -16 -5.14965 | CAGCCTGATGGACCG GGCGGGCT TCA AGCCCGCC TTTTTTGATGCCCGT Atu1846 1826694 - 1827098 + | hypothetical protein TERM 2157 1827275 - 1827243 - T 100 -9.9 -5.61596 | gap 1 ACCGGCATAAAAAAA CCCGCCGACGCC GGTTGGGAGT GGCGT-GGCGGG CTGCCGAATGGCTTG Atu1847 1827636 - 1827331 - | hypothetical protein TERM 2158 1827375 - 1827360 - G 70 -4.6 -4.46212 | TCGGCCAGGAGAAAA GCTGAG ATTT CGCAGC CTCCTTCATGGCCTC TERM 2159 1827736 - 1827722 - H 71 -7.2 -4.01137 | opp_overlap 1827721 GATACAATGCATAAA TTGTCA CCA TGACAA ATTGGCTCCCTGACA Atu1848 1827730 - 1829148 + | GntR family transcriptional regulator Atu1849 1829261 - 1829851 + | hypothetical protein purL 1829966 - 1832200 + | phosphoribosylformylglycinamidine synthase II Atu1851 1832217 - 1832450 + | BolA/YrbA family protein TERM 2160 1832550 - 1832524 - T 100 -19.5 -4.10552 | opp_overlap 1832524, overlap 1832505 CCGGACTAAATCAAA GGCCCGCGTGA TGCTC TCACGCGGGCC TTTTCATGTCAGGCA TERM 2161 1832524 - 1832550 + T 100 -19.5 -4.34402 | opp_overlap 1832505 1832524 CCGGACTAAATCAAA GGCCCGCGTGA TGCTC TCACGCGGGCC TTTTCATGTCAGGCA Atu1852 1833730 - 1832582 - | hypothetical protein TERM 2162 1832702 - 1832729 + g 74 -4 -4.84359 | overlap 1832705 1832708 GAGAACATATTGCCG GTGCATGCGCAG AAAA TTGCGCTTGTTC TTTTTGTAGCGCTCC TERM 2163 1832705 - 1832726 + g 76 -6.5 -4.52873 | overlap 1832702 1832708 AACATATTGCCGGTG CATGCGCAG AAAA TTGCGCTTG TTCTTTTTGTAGCGC TERM 2164 1832708 - 1832723 + g 74 -6.8 -4.36508 | overlap 1832705 1832702 ATATTGCCGGTGCAT GCGCAG AAAA TTGCGC TTGTTCTTTTTGTAG TERM 2165 1833394 - 1833381 - G 75 -8.1 -4.21314 | AAGAACAGCCCAAAA CGCCA GGCA TGGCG CAGATAACGCGCCGC TERM 2166 1833719 - 1833706 - G 71 -5.3 -4.32678 | CGGGGAAATAAAGAA CAAGT CGTG ACTTG ACGGTCGGCATGCAT TERM 2167 1833970 - 1833951 - g 89 -10 -4.72272 | opp_overlap 1833950 1833953 1833966 GCGCCGGACGAAAAA CACCGGCT CCCT AACCGGTG GTATCGTTGGTTCTG TERM 2168 1834059 - 1834049 - g 79 -8.2 -4.43879 | overlap 1834038 1834050 1834051 AGCAGGTAAGCAAAA GGCG CAC CGCC GCTTCCCGCAGCAGG Atu1853 1833841 - 1834089 + | hypothetical protein TERM 2169 1834315 - 1834325 + G 81 -8.2 -4.62336 | GGAACCCCGCAATTT CCGC AGT GCGG TTTTTCCGGTCAGGT grlA 1834234 - 1834569 + | glutaredoxin-related protein TERM 2170 1834618 - 1834638 + F 86 -12.6 -3.76749 | opp_overlap 1834613 1834635, overlap 1834635 CAGAAATTTATGCCA GGCGTTGC TTCAT GCAACGCC TTTGCCGTTCTTTTT Atu1855 1834707 - 1835915 + | MFS permease TERM 2171 1835965 - 1835933 - T 100 -16.4 -5.03994 | opp_overlap 1835937, overlap 1835937 TCGGACAGACAAAAA GAAAGGGCGCGGAA TTCTG TTCCGCGCCCTTTT TATTGAAAACAGCTG TERM 2172 1835937 - 1835961 + T 100 -17.9 -5.06414 | opp_overlap 1835937 1835933 ACAGACAAAAAGAAA GGGCGCGGAAT TCT GTTCCGCGCCC TTTTTATTGAAAACA TERM 2173 1835961 - 1835937 - T 100 -17.2 -5.02777 | opp_overlap 1835937, overlap 1835933 ACAGACAAAAAGAAA GGGCGCGGAA TTCTG TTCCGCGCCC TTTTTATTGAAAACA Atu1856 1836813 - 1835989 - | inositol monophosphatase family protein Atu1857 1837671 - 1836844 - | inositol monophosphatase family protein Atu1858 1838626 - 1837691 - | hypothetical protein TERM 2174 1837775 - 1837762 - G 84 -3.1 -5.18355 | gap 1 CGGAAAAATCAAAAA GCTTCG GGT CGA-GC AGATGCGACGGGTTC TERM 2175 1838177 - 1838195 + g 74 -7.4 -4.41895 | opp_overlap 1838175 1838177 ACAGAGCGAACAATA GGTGCC GCCGGAA GGCACC TTTTCCTTCACGATT glsA 1839620 - 1838691 - | glutaminase TERM 2176 1839665 - 1839648 - R 100 -14.1 -5.68438 | opp_overlap 1839648 CCAGCAAACAAAAAA GCCGCCC CGAG GGGCGGC TTTCTCAATACTGAA TERM 2177 1839648 - 1839665 + r 100 -14.1 -3.93695 | opp_overlap 1839648 CCAGCAAACAAAAAA GCCGCCC CGAG GGGCGGC TTTCTCAATACTGAA rpsD 1840307 - 1839690 - | 30S ribosomal protein S4 TERM 2178 1840518 - 1840493 - H 86 -7.5 -4.79174 | opp_overlap 1840507, overlap 1840495 1840507 AGGCAACCAACAAAA CACACCGGACA TTAC TGCCCGGCGTT GGGGCGGCTTCTAAA TERM 2179 1840516 - 1840495 - H 80 -10.1 -4.00694 | opp_overlap 1840507, overlap 1840493 1840507 GCAACCAACAAAACA CACCGGACA TTAC TGCCCGGCG TTGGGGCGGCTTCTA Atu1861 1840759 - 1841742 + | transporter Atu1862 1843326 - 1841782 - | hypothetical protein TERM 2180 1841814 - 1841837 + g 95 -11.7 -4.66163 | TCGCATCATCCTCAG CCGCATCCG CATCGC CGGGTGCGG TTTTTGCATCGAGAT Atu1863 1844315 - 1843422 - | permease TERM 2181 1844304 - 1844314 + g 72 -2.4 -4.84311 | GGCAAGAAAAATATG CGGC AAT GCCA TTTTGTTATGTCCGA Atu1864 1844991 - 1844353 - | putative homoserine/homoserine lactone efflux protein TERM 2182 1845101 - 1845069 - R 70 -9.7 -3.36452 | overlap 1845049 ATCTTCGAAGATCAA GCCGCCCTGTCATCC AGC GGACGAACGGGTGGC TGCTCGTAGCGGTGC TERM 2183 1845176 - 1845162 - R 80 -9.2 -4.09685 | opp_overlap 1845167, overlap 1845144 CGCCACTGCTCAAAA CCGCGG CGC CCACGG TACCGACCAGTCCCG Atu1865 1845392 - 1845156 - | hypothetical protein Atu1866 1845744 - 1845550 - | hypothetical protein murI 1846606 - 1845785 - | glutamate racemase lasT 1847423 - 1846590 - | tRNA/rRNA methyltransferase TERM 2184 1846758 - 1846773 + g 85 -2.5 -5.40072 | CACCGCCCGCAGATT GTCGA CCATTT TCGGC TTTTTTTCAGCAGGG Atu1869 1848056 - 1847538 - | hypothetical protein TERM 2185 1848797 - 1848781 - g 84 -10.1 -4.18494 | CACGGTCATCGAAAA GGACGTC TTC GACGCCC CGAGCGCCGGCGTGG icdA 1848284 - 1849498 + | isocitrate dehydrogenase TERM 2186 1849538 - 1849563 + F 100 -13.3 -5.45652 | opp_overlap 1849542, overlap 1849542 AAATGGTGAAACAGG AAAACCCGGCG GCAA CGCCGGGTTTC TTTTTTGTTCACAGT TERM 2187 1849542 - 1849559 + F 100 -14.1 -5.20735 | opp_overlap 1849542, overlap 1849538 GGTGAAACAGGAAAA CCCGGCG GCAA CGCCGGG TTTCTTTTTTGTTCA TERM 2188 1849559 - 1849542 - f 100 -14.1 -4.49756 | opp_overlap 1849542 1849538 GGTGAAACAGGAAAA CCCGGCG GCAA CGCCGGG TTTCTTTTTTGTTCA gst 1849834 - 1850460 + | glutathione S-transferase Atu1872 1850919 - 1850536 - | hypothetical protein TERM 2189 1850995 - 1851013 + r 83 -13.1 -3.2557 | opp_overlap 1850995 AGGGCCAAGAAAAAA GGCGGGG CAAAA CCCCGCC TTCATGAATTGTTCT TERM 2190 1851013 - 1850995 - R 100 -13.8 -5.45652 | opp_overlap 1850995 AGGGCCAAGAAAAAA GGCGGGGC AAA ACCCCGCC TTCATGAATTGTTCT TERM 2191 1851039 - 1851067 + r 80 -10.1 -3.97019 | opp_overlap 1851036 GTTCTGGATCAAGCC GCCAGCGCCGCGG CCA CCGCTTCGATGGC TTCTTTCGCCTTGGT alaS 1853695 - 1851032 - | alanyl-tRNA synthetase TERM 2192 1852328 - 1852342 + g 88 -6.4 -4.87291 | opp_overlap 1852328 GTCGTATCCCAGGAA TTCGGT CGC GCCGAA TTTTTCCTTCAGCTC TERM 2193 1853834 - 1853862 + r 83 -7.3 -4.59414 | opp_overlap 1853834, overlap 1853829 ATAGGCAAGGAAAAA GGGCCGCGCGA AGAAAAA TCGCACGACCC TTTTGATTCTTATCG TERM 2194 1853862 - 1853834 - R 100 -11.7 -4.89009 | opp_overlap 1853834 1853829 ATAGGCAAGGAAAAA GGGCCGCGCGA AGAAAAA TCGCACGACCC TTTTGATTCTTATCG recA 1855017 - 1853926 - | recombinase A TERM 2195 1856007 - 1855966 - g 85 -8.8 -4.67011 | gap 1, overlap 1855968 1856004 AACGGGACGGAAAAA GCCATCCTCCACC-CGC CCCTCATCC GCGAGGTGAAGGATGTC ACCGGCGCCGGCGAT TERM 2196 1856083 - 1856069 - g 89 -10 -4.44608 | CCGAGGGAAAAACAA TCAGGG AGG CCCTGA GACAGGGGGCGGCGG Atu1875 1855312 - 1856205 + | carbohydrate kinase Atu1876 1856234 - 1857157 + | hypothetical protein TERM 2197 1857387 - 1857421 + T 100 -9.3 -5.06414 | gap 1, opp_overlap 1857391, overlap 1857391 CCGTCACCGACAACA AAAAGGCCCGGACAGC TTGC GCT-TCCGGGCCTTCG TTTTTCTTCCAGAAC TERM 2198 1857417 - 1857391 - T 100 -14.5 -5.20333 | gap 1, opp_overlap 1857391 1857387 CACCGACAACAAAAA GGCCCGGACAGC TTGC GCT-TCCGGGCC TTCGTTTTTCTTCCA TERM 2199 1857391 - 1857417 + T 100 -14.5 -3.9407 | gap 1, opp_overlap 1857391, overlap 1857387 CACCGACAACAAAAA GGCCCGGACAGC TTGC GCT-TCCGGGCC TTCGTTTTTCTTCCA Atu1877 1859681 - 1857441 - | OmpA family protein TERM 2200 1858924 - 1858934 + g 73 -4.6 -4.58283 | overlap 1858925 GCTGCCGGCTTTTTC TCCG GAA CGGG TTTTTCAGCCGGTTC TERM 2201 1858942 - 1858952 + g 75 -8.2 -4.1891 | overlap 1858925 GGAACGGGTTTTTCA GCCG GTT CGGC TTTCTGTTCCGGGGC Atu1878 1859967 - 1859761 - | hypothetical protein Atu1879 1860027 - 1860800 + | ABC transporter, substrate binding protein (amino acid) TERM 2202 1860826 - 1860850 + F 100 -15.8 -5.27335 | TCTGTTGAAATCTCG TGGCGGAAGG CTTGC CCTTCCGCCA TTTTTGTTTGAAAAC TERM 2203 1861048 - 1861062 + G 73 -10 -3.60296 | opp_overlap 1861058 1861059 GGCGATGCGGGCTGG GGCGAT GAA ATCGCC TTTGGCGTCAAGGTC Atu1880 1860913 - 1861716 + | ABC transporter, membrane spanning protein (amino acid) Atu1881 1861713 - 1862543 + | ABC transporter, membrane spanning protein (amino acid) TERM 2204 1862551 - 1862584 + F 74 -7.5 -4.10657 | gap 1, overlap 1862552 AGCGCTGAACGGCAA CGTTGGCAGCACTC ATCAACG GAG-GCTGCCAACA TTTTGAAAAATATAA TERM 2205 1862552 - 1862583 + F 72 -11 -3.06073 | gap 1, overlap 1862551 GCGCTGAACGGCAAC GTTGGCAGCACTC ATCAACG GAG-GCTGCCAAC ATTTTGAAAAATATA usg 1862712 - 1862978 + | usg protein TERM 2206 1863504 - 1863485 - g 71 -7.8 -4.10657 | CGACATTTCCGAAAA CATGGTCG AGAT CGCCCATG AGAAGGACCTCTACG Atu1883 1863063 - 1863887 + | hypothetical protein TERM 2207 1863933 - 1863893 - T 93 -15.5 -3.06133 | opp_overlap 1863886 CAAGGGCTGAGGCAA CTGCGTCTTTCTTCTCCCC GCC GGGGAGAAGAAACAAGCGG CATCCAATCGCCTCA ssuA 1864992 - 1864027 - | ABC transporter, substrate binding protein (aliphatic sulfonate) TERM 2208 1864340 - 1864328 - G 71 -9.1 -3.72576 | TTGGCCTCGACGAAA TCGCC ATT GGCGA GAAAATAGCTCCAGG TERM 2209 1865253 - 1865227 - R 100 -10.9 -5.38054 | gap 1, opp_overlap 1865227 TCCCACAAATAAAAA TGCCCTC-CCCG GCGG CGGGAAAGGGCA TCGTTCAAAGACAGG Atu1885 1865769 - 1865281 - | AsnC family transcriptional regulator Atu1886 1866466 - 1865840 - | hypothetical protein TERM 2210 1865886 - 1865900 + g 77 -7.8 -4.40561 | opp_overlap 1865873 1865872, overlap 1865887 1865891 ACCGGAAGCAGCTCC TCCGTG AAC CACGGG TTCTTTTTCAGCCAC TERM 2211 1865891 - 1865903 + g 79 -7.7 -4.56597 | overlap 1865887 1865886 AAGCAGCTCCTCCGT GAACC ACG GGTTC TTTTTCAGCCACCCC exoI 1867040 - 1866486 - | succinoglycan biosynthesis protein TERM 2212 1866543 - 1866531 - G 73 -4.7 -4.60487 | opp_overlap 1866531 1866531 1866534, overlap 1866533 GATGACGGTCAAAAA GCCCG CCG CTGGC GTTTCCAGATCCGCT TERM 2213 1867035 - 1867010 - G 75 -2.4 -4.91459 | overlap 1867011 1867025 GAATACCGAGAAAAA CCGTGGCGAG AAAAAG CCCGCCATCG CGCATTGCCGAAAAA TERM 2214 1867038 - 1867025 - G 74 -3.7 -4.82901 | overlap 1867010 1867011 CCGTGGCGAGAAAAA GCCCG CCAT CGCGC ATTGCCGAAAAACGC Atu1888 1867187 - 1868722 + | two component sensor kinase dgk 1869140 - 1868736 - | diacylglycerol kinase TERM 2215 1869060 - 1869086 + g 74 -3.6 -4.8622 | gap 1, opp_overlap 1869059, overlap 1869061 CTGAACGGAATAACG CGC-GGCGGCG AAAAGA TGCCGCCAGCC TTTTTCCTTGCGAAA cobT 1870183 - 1869149 - | nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase cobS 1870336 - 1871121 + | cobalamin synthase TERM 2216 1871276 - 1871254 - g 74 -7 -4.29738 | gap 1 TTATAGCGACGAAAA GCG-CCGCA GGATCA TGCGGGCGC TGCCGCAGAGACTGG Atu1892 1871141 - 1871332 + | hypothetical protein TERM 2217 1871866 - 1871850 - g 77 -11.5 -3.62096 | TGTCATGACCGCAAA CGGCCGC ACG GCAGCCG CCCCCGTAACCCTGT Atu1893 1871329 - 1872036 + | hypothetical protein TERM 2218 1872377 - 1872355 - f 71 -7.6 -4.00468 | overlap 1872347 1872358 AGGACAAGGCATAAA GACGCCCGCA CTC TGTGGGCTTC GCATTGCATTGTTCG TERM 2219 1872443 - 1872429 - f 70 -7.1 -4.14392 | CTTGAAGCGCGAAAA TGCCG CAAAC CGGCA TAACCCTTGAAAGGC TERM 2220 1872573 - 1872559 - g 73 -10 -3.67622 | overlap 1872555 GACCGCGAAAATGAA GGCGAT ATC ATCGCC GCCTCCGACAGCATC ribB 1872469 - 1873110 + | 3, 4-dihydroxy-2-butanone 4-phosphate synthase TERM 2221 1873142 - 1873161 + T 89 -16.4 -2.64155 | opp_overlap 1873142, overlap 1873139 1873138 GTGCGAATACCAAAA CGCCCGGC GTAG GCCGGGCG TGAATTTGGAGGCAG TERM 2222 1873161 - 1873142 - T 100 -16.4 -4.4261 | opp_overlap 1873142 1873139 1873138 GTGCGAATACCAAAA CGCCCGGC GTAG GCCGGGCG TGAATTTGGAGGCAG Atu1896 1873415 - 1873209 - | hypothetical protein TERM 2223 1873330 - 1873272 - G 75 -13.4 -2.92667 | gap 2, opp_overlap 1873274, overlap 1873269 GTAAGTGGCAAAGGA CGCACATCCCCTCGACGTCATCCTCGGC CCTGT GCCGAGGATGACGTCGAATGAA-AT-CA ATACGTTGCAGATCC Atu1897 1874212 - 1873424 - | short chain dehydrogenase TERM 2224 1873771 - 1873784 + g 70 -3.8 -4.59773 | overlap 1873757 ACGCGATGTTGACGA TGGC ACCTCG GCCA TTTTTCAGCATGGCG rbsA 1875705 - 1874227 - | ABC transporter, nucleotide binding/ATPase protein (ribose) TERM 2225 1875821 - 1875783 - R 83 -11.7 -3.72621 | gap 1, overlap 1875779 1875787 CTAAAGACAAACCAA TGAATGCCCCGCGCATCC GGTT GGACGCGCGGGGCAGA-A GGATCAGGGATGGTT TERM 2226 1875818 - 1875787 - R 100 -23.8 -3.5292 | overlap 1875783 1875779 AGACAAACCAATGAA TGCCCCGCGCATCC GGTT GGACGCGCGGGGCA GAAGGATCAGGGATG rbsB 1876754 - 1875825 - | ABC transporter, substrate binding protein (ribose) TERM 2227 1876823 - 1876847 + r 74 -7.2 -4.15044 | overlap 1876826 CCTCCGGTCGTTTTT C-ACGCCTCCCG TAT CGGGAGG-GTCG TTTATTGCGCGGACG rbsC 1877867 - 1876887 - | ABC transporter, membrane spanning protein (ribose) tktB 1878306 - 1879115 + | transketolase tkt 1879142 - 1880071 + | transketolase TERM 2228 1880087 - 1880114 + F 100 -15.6 -4.72007 | GGTCTCCTCCCAGGG TCGTCGCGCGTC TTCG GATGCGCGGCGA TTTCTTTTAGTACGC glpK 1880193 - 1881662 + | glycerol kinase 2 Atu1904 1881707 - 1882642 + | transcriptional regulator Atu1905 1882667 - 1883452 + | short chain dehydrogenase Atu1906 1884383 - 1883622 - | ABC transporter, membrane spanning protein TERM 2229 1883763 - 1883743 - G 81 -5.3 -4.85599 | overlap 1883745 GCGATCTCATAAAAA CTCCAGCGG AAA CCACTGATG AGATAAAGCACCGGA Atu1907 1885306 - 1884380 - | ABC transporter, nucleotide binding/ATPase protein TERM 2230 1884628 - 1884653 + g 70 -3.9 -4.63218 | GAAAGAGCTGTTTGC GGCCGAGCT TCTTCATC AGCGCGGTC TTTTCTTCCACGAGG TERM 2231 1884890 - 1884917 + g 80 -9.8 -4.00122 | opp_overlap 1884880 CAACACACGACGCTT CATGCCGCCGGA AAGT TCCCGCAGCATG TTGTCTTTCTTGTCC Atu1908 1886232 - 1885411 - | hypothetical protein Atu1909 1886512 - 1886318 - | hypothetical protein TERM 2232 1886438 - 1886457 + g 100 -9.2 -5.61596 | opp_overlap 1886426, overlap 1886440 TAAGGCCGTCTTCTT CACCGGCC TTCG GGCCGGTC TTTTTTTGTGGGCGT TERM 2233 1886440 - 1886455 + g 95 -11.8 -4.45201 | opp_overlap 1886426, overlap 1886438 AGGCCGTCTTCTTCA CCGGCC TTCG GGCCGG TCTTTTTTTGTGGGC Atu1910 1887479 - 1886631 - | hypothetical protein Atu1911 1888195 - 1887926 - | hypothetical protein mclA 1890123 - 1888309 - | methyl-accepting chemotaxis protein Atu1913 1890366 - 1890680 + | hypothetical protein Atu1914 1892103 - 1890787 - | recombination factor protein RarA TERM 2234 1891323 - 1891296 - G 71 -6.2 -4.38927 | gap 1 GGGCGAGATAATAAA GTGC-CGCATCCG GGT CGGAACCGCGCAC GGATTTATGCAGCGC TERM 2235 1891774 - 1891764 - G 85 -6.8 -4.82901 | overlap 1891765 TTTCGTCGACAAAAA GCAG CGT CTGC CGGCCATTCATCCGG Atu1915 1893506 - 1892100 - | htrA family protein TERM 2236 1893963 - 1893928 - g 75 -8.3 -4.17132 | gap 1 AAATGGCTGAAGAAA CGTCAGGAATGCG-CA GCCGA TGTCGCCTGCCTGACG GGGGCCTATGAGGAA Atu1916 1893679 - 1894029 + | hypothetical protein Atu1917 1895385 - 1894045 - | hypothetical protein TERM 2237 1894369 - 1894353 - G 71 -7.9 -4.06384 | CGCCAAGACGATAAA GCTCGCC AAA GGCCAGC AGGGAACGCGCCGTC TERM 2238 1895271 - 1895255 - G 100 -11.5 -4.8048 | TTCGGACAGCAAAAA GCCGCCC AGA GAGCGGC TGATCGAACGACTGT ilvD 1897312 - 1895477 - | dihydroxy-acid dehydratase TERM 2239 1895576 - 1895588 + g 74 -3.3 -4.73613 | overlap 1895577 CTTGCGCGGTGCTTC CGGCT TCC AGCCC TTTTCTTCCTGCTCG TERM 2240 1897810 - 1897788 - g 70 -9.8 -3.48276 | GCCCGGTGCATACAA GCTGGATGAG AAA CTCACCCCGC TCGACGCCGTCACCA Atu1919 1897621 - 1898562 + | putative sulfite oxidase subunit YedY Atu1920 1898565 - 1899212 + | putative sulfite oxidase subunit YedZ TERM 2241 1899295 - 1899267 - f 83 -8.1 -4.45083 | gap 1, overlap 1899268 1899284 1899285 TCCACACGGAGAAAA CGCGGCC-GAGC AGCAAA GCTCCGGCCGCC GTTGCGCGAAACGCG TERM 2242 1899294 - 1899268 - f 74 -11.6 -3.26568 | gap 1, overlap 1899267 1899284 1899285 CCACACGGAGAAAAC GCGGCC-GAGC AGCAAA GCTCCGGCCGC CGTTGCGCGAAACGC TERM 2243 1900328 - 1900338 + G 74 -3.2 -4.81551 | TGCTTCTCTCATTCG TCCT GAT AGGG TTTTTCGTCTGGCTG Atu1921 1899652 - 1900524 + | hypothetical protein TERM 2244 1900625 - 1900646 + T 100 -11.5 -4.78149 | opp_overlap 1900625 CCAAACGCAAAAAAA GCCGGGCGA TCTC TCACCCGGC TTTTTAACTTATGAC TERM 2245 1900646 - 1900625 - T 100 -13.7 -5.58209 | opp_overlap 1900625 CCAAACGCAAAAAAA GCCGGGCGA TCTC TCACCCGGC TTTTTAACTTATGAC rplQ 1901105 - 1900680 - | 50S ribosomal protein L17 TERM 2246 1901143 - 1901198 + r 70 -9.8 -3.39844 | gap 1, opp_overlap 1901194, overlap 1901159 1901191 1901194 TGCCTTCTTTAAGGC CTGCCGTTTCCTGGCACAT-GCAGATG ACT TATCTGCTGTTTGACGGGGAAAGGCAG TCTTTAAGGTCTGCC rpoA 1902234 - 1901224 - | DNA-directed RNA polymerase subunit alpha TERM 2247 1902416 - 1902378 - R 75 -12.4 -3.00498 | opp_overlap 1902384, overlap 1902384 1902399 1902405 CACACGCCAGATACA CGAAAATTCCGCCAGACC GAA GGAAAGGCGGAATTTCCG AACCACGGTCGCGTC TERM 2248 1902410 - 1902384 - R 73 -6.4 -4.41353 | opp_overlap 1902384, overlap 1902378 1902399 1902405 CCAGATACACGAAAA TTCCGCCAGACC GAA GGAAAGGCGGAA TTTCCGAACCACGGT rpsK 1902819 - 1902430 - | 30S ribosomal protein S11 TERM 2249 1902878 - 1902891 + r 77 -8.1 -4.08216 | opp_overlap 1902878 CTACACCGGCAATCA GCTCG TAGC CGAGC TTTTCGCCAAACTCA TERM 2250 1902937 - 1902907 - R 78 -13.3 -2.64155 | opp_overlap 1902906 1902907, overlap 1902911 TTTTCGCCAAACTCA GAAAGGCTGGCGC GGACT GCACCAGCCTCCC CTTTCCGGAGAACCG TERM 2251 1902933 - 1902911 - R 93 -12.7 -4.02132 | opp_overlap 1902907 1902906, overlap 1902907 CGCCAAACTCAGAAA GGCTGGCGC GGACT GCACCAGCC TCCCCTTTCCGGAGA rpsM 1903326 - 1902958 - | 30S ribosomal protein S13 TERM 2252 1903474 - 1903428 - R 93 -12.4 -4.3208 | gap 1, opp_overlap 1903429 1903461 1903463, overlap 1903421 1903462 1903463 CGTGACAAGTCAAAA CGACCGAACCCGGATCTCCCT TCCCTG AGGGAAATCCGCG-CCAGTCG CTTGGGATGTCGCGA TERM 2253 1903463 - 1903499 + r 70 -9.5 -3.35046 | gap 1, opp_overlap 1903428 1903462 1903463, overlap 1903461 TTCCCTGAGGGAAAT CCGCGCCAG-TCGC TTGGGATGTC GCGAGTTGGCGCGG TGTTTAACGGAATCA adk 1904220 - 1903630 - | adenylate kinase prlA 1905557 - 1904217 - | preprotein translocase subunit SecY TERM 2254 1905841 - 1905884 + r 81 -13 -3.12449 | opp_overlap 1905850, overlap 1905839 1905837 1905844 GCACCATAGGCCAGG GAGCGCAAACGCCCGGGGCG ACTA TGCCCCGGGCGTCTGAAGTC TATATATTACTCGGA TERM 2255 1905844 - 1905882 + r 81 -13.1 -3.11951 | gap 1, opp_overlap 1905850, overlap 1905841 1905839 1905837 CCATAGGCCAGGGAG C-GCAAACGCCCGGGGCG ACTA TGCCCCGGGCGTCTGAAG TCTATATATTACTCG TERM 2256 1905875 - 1905850 - R 100 -19 -3.61178 | opp_overlap 1905844 1905841 1905839 1905837 GCCAGGGAGCGCAAA CGCCCGGGGC GACTAT GCCCCGGGCG TCTGAAGTCTATATA rplO 1906370 - 1905891 - | 50S ribosomal protein L15 rpmD 1906593 - 1906387 - | 50S ribosomal protein L30 rpsE 1907174 - 1906605 - | 30S ribosomal protein S5 TERM 2257 1907130 - 1907158 + g 90 -5.9 -5.21709 | overlap 1907132 GCTATCGCGCTCTTC ACGGTTCTGGCGA TCG TCGCGAGAACCTC TTTTTTCCTGTGCCA TERM 2258 1907132 - 1907156 + g 95 -12.9 -4.23988 | overlap 1907130 TATCGCGCTCTTCAC GGTTCTGGCGA TCG TCGCGAGAACC TCTTTTTTCCTGTGC TERM 2259 1907252 - 1907219 - R 95 -10.4 -4.564 | gap 2, opp_overlap 1907248 AACGGCAAACGAAAA GACCA-GCGG-CCTCG ATGA CGAGATCCGCATGGTC CGGTGAAATTCCGCC TERM 2260 1907288 - 1907261 - R 100 -17.1 -3.53224 | opp_overlap 1907248 CATGGTCCGGTGAAA TTCCGCCCGGA TCATTG TCCGGGCGGAA AAAGATCAGAAGTTC rplR 1907656 - 1907294 - | 50S ribosomal protein L18 rplF 1908202 - 1907669 - | 50S ribosomal protein L6 TERM 2261 1908041 - 1908059 + g 73 -10.3 -3.67498 | CTTGGTGCCATTAGC CGGCGTT ACGGA AACGCCG TTATCTTCGAGCTTC rpsH 1908644 - 1908246 - | 30S ribosomal protein S8 TERM 2262 1908467 - 1908477 + g 71 -8.2 -4.11216 | GCTCGATCGTGAATT CGGC CTT GCCG TTTTCGAAATCGACC rpsN 1908962 - 1908657 - | 30S ribosomal protein S14 rplE 1909550 - 1908996 - | 50S ribosomal protein L5 rplX 1909851 - 1909543 - | 50S ribosomal protein L24 rplN 1910232 - 1909864 - | 50S ribosomal protein L14 TERM 2263 1910177 - 1910212 + g 70 -4.7 -4.48299 | gap 2, opp_overlap 1910180, overlap 1910178 ACCTTGATGCACATG ACACGACGTGCGCCGGA ATTA TCCG-C-CACGTCGAGG TTTGTTTGCATCTGA TERM 2264 1910403 - 1910383 - R 100 -12.6 -4.61873 | opp_overlap 1910377 1910385 GCGCATAAAGCAAAA GACGCTCG GGTCA CGAGCGTC CTTGCGCTGCTTCAT rpsQ 1910703 - 1910467 - | 30S ribosomal protein S17 rpmC 1910915 - 1910715 - | 50S ribosomal protein L29 rplP 1911341 - 1910928 - | 50S ribosomal protein L16 TERM 2265 1911209 - 1911175 - G 72 -12.1 -3.05384 | gap 1, opp_overlap 1911175 1911186 1911205, overlap 1911154 GCGCGCTTCATGTAA CGCGTGATCG-CGCGG CGGG CCGCTTCGATCTCGCG TGCATTCACGCGGTT rpsC 1912111 - 1911380 - | 30S ribosomal protein S3 TERM 2266 1911792 - 1911816 + g 90 -15.1 -3.61764 | TCGATTTCCGGCTTG CGCACTTCAAC GAT GTTGAGGTGCG TTTCGGAGTTGGTCA rplV 1912500 - 1912111 - | 50S ribosomal protein L22 TERM 2267 1912236 - 1912285 + g 79 -9.4 -4.14392 | opp_overlap 1912243, overlap 1912238 1912239 TGGTGATGGACTTGC CAA-CATAGGCCTCGGCGACGACG AGAG CGTCGACGTCGAGATC-ATGGTTG TTTTCCGCATTGGCA TERM 2268 1912238 - 1912282 + g 75 -7.8 -4.19577 | gap 1, opp_overlap 1912243, overlap 1912236 1912239 GTGATGGACTTGCCA ACATAGGCCTCGGCGACGACG AGAG CGTCGACGTCGAGATC-ATGG TTGTTTTCCGCATTG rpsS 1912781 - 1912503 - | 30S ribosomal protein S19 rplB 1913633 - 1912797 - | 50S ribosomal protein L2 TERM 2269 1912913 - 1912895 - G 74 -12.4 -3.18264 | overlap 1912896 TGCCCCACGGAGTAA CCGGGTGG CGA CCACCCGA CGTGCGACCTTCACC TERM 2270 1912912 - 1912896 - G 72 -13.7 -2.50816 | overlap 1912895 GCCCCACGGAGTAAC CGGGTGG CGA CCACCCG ACGTGCGACCTTCAC rplW 1913970 - 1913677 - | 50S ribosomal protein L23 rplD 1914587 - 1913967 - | 50S ribosomal protein L4 TERM 2271 1914409 - 1914432 + g 73 -9.6 -3.9978 | gap 1, overlap 1914402 TTGTACATCTTCGCA CCGGTGCGGGA AAC TTCCG-ACCGG TTCTTGGTTTTGTGG rplC 1915241 - 1914600 - | 50S ribosomal protein L3 rpsJ 1915718 - 1915410 - | 30S ribosomal protein S10 TERM 2272 1915905 - 1915918 + r 71 -9.5 -3.5771 | overlap 1915862 CGGGTGAGTGTGAGT GCGCG TTTA CGCGC TTTCACCGAATTTTT TERM 2273 1915990 - 1915947 - R 81 -6.6 -4.81083 | opp_overlap 1915949 1915952 1915971 1915972 1915975, overlap 1915948 1915952 1915975 TTCAAGCACTAAAAA TGCAACGCCGCCAGGCTTTT TATT AAAAGTCCGGCGACGGTGTT CTTGACACCGCCGCC TERM 2274 1915989 - 1915948 - R 71 -10.1 -3.47927 | opp_overlap 1915949 1915952 1915971 1915972 1915975, overlap 1915947 1915952 1915975 TCAAGCACTAAAAAT GCAACGCCGCCAGGCTTTT TATT AAAAGTCCGGCGACGGTGT TCTTGACACCGCCGC TERM 2275 1915949 - 1915988 + r 77 -11.4 -3.61398 | opp_overlap 1915948 1915947 1915952 1915975, overlap 1915952 1915971 1915972 1915975 CAAGCACTAAAAATG CAACGCCGCCAGGCTTTT TATT AAAAGTCCGGCGACGGTG TTCTTGACACCGCCG TERM 2276 1915952 - 1915985 + r 72 -11.7 -2.63073 | opp_overlap 1915948 1915947 1915952 1915975, overlap 1915949 1915971 1915972 1915975 GCACTAAAAATGCAA CGCCGCCAGGCTTTT TATT AAAAGTCCGGCGACG GTGTTCTTGACACCG TERM 2277 1915985 - 1915952 - R 89 -13.9 -3.47218 | opp_overlap 1915952 1915949 1915971 1915972 1915975, overlap 1915948 1915947 1915975 GCACTAAAAATGCAA CGCCGCCAGGCTTTT TATT AAAAGTCCGGCGACG GTGTTCTTGACACCG TERM 2278 1915971 - 1916013 + r 86 -10.4 -4.11216 | opp_overlap 1915952 1915948 1915947 1915975, overlap 1915952 1915949 1915972 1915975 GCCAGGCTTTTTATT AAAAGTCCGGCGACGGTGTT CTT GACACCGCCGCCGGGCTGAA TTTTGAAAGTCCAAA TERM 2279 1915972 - 1916012 + r 84 -13.9 -3.06515 | opp_overlap 1915952 1915948 1915947 1915975, overlap 1915952 1915949 1915971 1915975 CCAGGCTTTTTATTA AAAGTCCGGCGACGGTGTT CTT GACACCGCCGCCGGGCTGA ATTTTGAAAGTCCAA TERM 2280 1916009 - 1915975 - R 100 -19.3 -4.25104 | opp_overlap 1915952 1915949 1915972 1915971 1915975, overlap 1915952 1915948 1915947 GGCTTTTTATTAAAA GTCCGGCGACGGTGT TCTTG ACACCGCCGCCGGGC TGAATTTTGAAAGTC TERM 2281 1915975 - 1916009 + r 100 -20 -2.75081 | opp_overlap 1915952 1915948 1915947 1915975, overlap 1915952 1915949 1915972 1915971 GGCTTTTTATTAAAA GTCCGGCGACGGTGTT CTT GACACCGCCGCCGGGC TGAATTTTGAAAGTC tuf 1917204 - 1916029 - | elongation factor Tu TERM 2282 1916071 - 1916098 + g 81 -7.7 -4.67982 | gap 1, overlap 1916087 GGCGCCGACGGTACG GCCGC-CTTCGC GGATA GCGAAGCGCAGC TTTTCTTCCATCGCG fusA 1919370 - 1917271 - | elongation factor G rpsG 1919875 - 1919405 - | 30S ribosomal protein S7 rpsL 1920324 - 1919953 - | 30S ribosomal protein S12 TERM 2283 1920453 - 1920421 - H 80 -9.2 -4.11216 | gap 1, overlap 1920422 TCCTCATGCGCAAAA CGTGGCCCGATCCGT TTTC ACGGAT-GGACCACC AAGAGCAGAGGACGC TERM 2284 1920452 - 1920422 - H 81 -12.7 -3.06515 | gap 1, overlap 1920421 CCTCATGCGCAAAAC GTGGCCCGATCCGT TTTC ACGGAT-GGACCAC CAAGAGCAGAGGACG TERM 2285 1920558 - 1920547 - H 71 -4.4 -4.57073 | GATGTTCGGGAAAAA CGTT TCCG AACG GCCAGCACAGATAGA Atu1952 1920852 - 1921145 + | hypothetical protein TERM 2286 1921328 - 1921347 + G 75 -13.6 -2.91383 | GCACGCGAAGGTGGG TCCGGCAC TGAT GTGCCGGA TCTCTCCATCGAGGT Atu1953 1921157 - 1921507 + | hypothetical protein TERM 2287 1922627 - 1922615 - g 71 -6.9 -4.14739 | opp_overlap 1922624 CGATCTATGCGAAAA CCGGC AGC ACCGG CCAGGCCGATCTCGT Atu1954 1921606 - 1922691 + | hypothetical protein TERM 2288 1922756 - 1922737 - T 100 -15 -5.38054 | opp_overlap 1922737 CCGCACAAACAAAAA CGCCCGGA TTGC TCCGGGCG TTTTTACTGAACCAT TERM 2289 1922737 - 1922756 + T 100 -15 -4.7254 | opp_overlap 1922737 CCGCACAAACAAAAA CGCCCGGA TTGC TCCGGGCG TTTTTACTGAACCAT rpoC 1927016 - 1922808 - | DNA-directed RNA polymerase subunit beta' TERM 2290 1925120 - 1925108 - G 73 -9.1 -3.90112 | CCTTGCCGAACGAAA TGCCG GCG CGGCA GGCGTGGCTGAAGCC TERM 2291 1925749 - 1925796 + g 76 -6.2 -4.67038 | gap 1, opp_overlap 1925750, overlap 1925744 1925750 GCGCGGTTCAGAAGA ACCGGATGTTCGCGGATGACCTC GTC GAGGATATCC-CAGACCTCCGGC TTTTCCTTTTCAACC TERM 2292 1926070 - 1926084 + g 76 -12.8 -3.28712 | GCACCCGTGATGACG CGGCCG CGA CGGCCG TTGTCGAACAGCGCA TERM 2293 1926878 - 1926848 - G 71 -5.5 -4.36914 | gap 1, opp_overlap 1926850, overlap 1926850 TGCGCGCGCAGAAAA GACCGTCACGCTCA GGCT TGAACGT-ACGGTA GTTGATGGTTTCCGG TERM 2294 1927160 - 1927129 - R 77 -11.6 -3.56099 | gap 1, opp_overlap 1927155 CACAATGCGGCGAAA GTGTCCCACGCCAGC CGG GCTGACG-GGGAAAC CGGCAGGCGCCCTGG TERM 2295 1927188 - 1927161 - R 76 -12.6 -2.74144 | opp_overlap 1927155 1927162, overlap 1927160 GGCTGACGGGGAAAC CGGCAGGCGCCC TGGA AGGCGCCCGCCT CTATCGTGTTTATTC TERM 2296 1927162 - 1927187 + r 84 -13.2 -3.05294 | opp_overlap 1927161 1927160, overlap 1927155 GCTGACGGGGAAACC GGCAGGCGCC CTGGAA GGCGCCCGCC TCTATCGTGTTTATT rpoB 1931334 - 1927198 - | DNA-directed RNA polymerase subunit beta TERM 2297 1931494 - 1931537 + r 100 -14.1 -4.08216 | opp_overlap 1931494 CATTCTCTTGAAGAA CCCATTACCCAAAAGCC ATTTTCACGC GGCTTTTGGGTAATGAG TTTTAAAAACGATAA TERM 2298 1931537 - 1931494 - R 100 -17 -3.61715 | opp_overlap 1931494 CATTCTCTTGAAGAA CCCATTACCCAAAAGCCA TTTTCACG CGGCTTTTGGGTAATGAG TTTTAAAAACGATAA TERM 2299 1931592 - 1931547 - R 100 -14.8 -4.60889 | gap 1, overlap 1931553 1931554 1931556 AATGAGTTTTAAAAA CGATAAC-GACGGAAAGGGGC GTTAA GCCCCTTCCCGCCAGCAATCG CAAGATTACTTAACG TERM 2300 1931585 - 1931553 - R 100 -15.6 -3.75505 | overlap 1931547 1931554 1931556 TTTTAAAAACGATAA CGACGGAAAGGGGC GTTAA GCCCCTTCCCGCCA GCAATCGCAAGATTA TERM 2301 1931584 - 1931554 - R 90 -16.9 -2.8458 | overlap 1931553 1931547 1931556 TTTAAAAACGATAAC GACGGAAAGGGGC GTTAA GCCCCTTCCCGCC AGCAATCGCAAGATT TERM 2302 1931582 - 1931556 - R 87 -15.9 -2.95938 | overlap 1931554 1931553 1931547 TAAAAACGATAACGA CGGAAAGGGGC GTTAA GCCCCTTCCCG CCAGCAATCGCAAGA rplL 1931975 - 1931598 - | 50S ribosomal protein L7/L12 TERM 2303 1932042 - 1932030 - R 81 -6.9 -4.72333 | opp_overlap 1932030, overlap 1932022 AATTACAGCGAAAAA CCGCC TTA AGCGG CTTCGTCCTTCTTGG rplJ 1932553 - 1932035 - | 50S ribosomal protein L10 TERM 2304 1932521 - 1932535 + g 70 -3.5 -4.6856 | GACTTCGTTCAGCTC CGTGA CGAAT TCGCG TTTTTCCGCTCTTTC TERM 2305 1932654 - 1932631 - R 86 -11.8 -3.86346 | gap 1, opp_overlap 1932633 GGACCTTTTTACAAA GATCC-CGAGC GAC GCTCGAGGATC CTGTCCCCCGCTCTG TERM 2306 1932841 - 1932871 + r 100 -12.7 -4.26076 | opp_overlap 1932824 1932844, overlap 1932825 1932824 1932844 TCCGGGTTTCCCCGG AAATTTCCGGCTC CCTGA GAGCCGGAAATTC TTTTAGTCACGCTCC TERM 2307 1932844 - 1932868 + r 100 -14.4 -4.25256 | opp_overlap 1932844, overlap 1932841 GGGTTTCCCCGGAAA TTTCCGGCTC CCTGA GAGCCGGAAA TTCTTTTAGTCACGC TERM 2308 1932868 - 1932844 - R 95 -15.1 -3.53012 | opp_overlap 1932844 1932841 GGGTTTCCCCGGAAA TTTCCGGCTCC CTG AGAGCCGGAAA TTCTTTTAGTCACGC rplA 1933605 - 1932910 - | 50S ribosomal protein L1 rplK 1934039 - 1933608 - | 50S ribosomal protein L11 TERM 2309 1933972 - 1933998 + g 73 -10.7 -3.65827 | AGTGCCGGACCGATC GGCGGGGACGG ATTGG CCGACCCAGCC TTTACCTGCAACTTG nusG 1934715 - 1934185 - | transcription antitermination protein NusG TERM 2310 1934625 - 1934641 + g 75 -7.9 -4.2828 | CAAAAAGATGACTCA GGCCCTT CTG ACGGGCC TTTTCCTCGATCGAC secE 1934960 - 1934760 - | preprotein translocase subunit SecE galE 1936239 - 1935346 - | UDP-glucose 4-epimerase TERM 2311 1936333 - 1936352 + r 100 -15 -3.90856 | opp_overlap 1936333, overlap 1936351 ATACAAAACAAAAAA CCCCGCTG TTTC CAGCGGGG TTTCCTTCAAGCCTT TERM 2312 1936352 - 1936333 - R 100 -15 -5.8901 | opp_overlap 1936333 1936351 ATACAAAACAAAAAA CCCCGCTG TTTC CAGCGGGG TTTCCTTCAAGCCTT tuf 1937557 - 1936382 - | elongation factor Tu TERM 2313 1936424 - 1936451 + g 81 -7.7 -4.67982 | gap 1, overlap 1936440 GGCGCCGACGGTACG GCCGC-CTTCGC GGATA GCGAAGCGCAGC TTTTCTTCCATCGCG TERM 2314 1937593 - 1937616 + H 74 -9.6 -3.65426 | gap 1, overlap 1937592 GTGAAGTCGATTTCC CGGCGA-ACCG GTT TGGTGTCGCCG TTTAAGGCTTTGTAA Atu1967 1937961 - 1938593 + | hypothetical protein TERM 2315 1938647 - 1938622 - g 100 -19.1 -4.08064 | opp_overlap 1938622 AATGCTTCCCGAAAA GGCCCGGAAAC ACCA GTTTCCGGGCC TTTTTCATGATGCGC TERM 2316 1938622 - 1938647 + G 100 -19.1 -4.77036 | opp_overlap 1938622 AATGCTTCCCGAAAA GGCCCGGAAAC ACCA GTTTCCGGGCC TTTTTCATGATGCGC Atu1968 1938608 - 1938787 + | hypothetical protein Atu8023 1938858 - 1938971 + | hypothetical protein Atu1969 1939430 - 1939062 - | hypothetical protein TERM 2317 1939913 - 1939873 - g 100 -17.7 -3.96148 | opp_overlap 1939872 CCGGCCCACGAGAAA CCCGCTCATCCGCGATCAG CTC CTGATTACGGATGAGCAAG ATATCCTCATGTTCA Atu1970 1939546 - 1939908 + | hypothetical protein Atu1971 1940502 - 1940053 - | hypothetical protein TERM 2318 1940468 - 1940449 - G 76 -9.2 -4.03234 | TGCGGGGGAGACAAA CGCCGCCG ATGC CAGCAGCG CAAATGATGAGAGAA Atu1972 1940824 - 1941150 + | hypothetical protein TERM 2319 1941195 - 1941167 - f 100 -16 -4.16016 | overlap 1941168 CGATTTGCCAATAAA CCGGCCGCGGCA TGCGG TGCCGCAGCCGA TAGGATAAATTTACC TERM 2320 1941194 - 1941168 - f 100 -17.3 -3.09288 | overlap 1941167 GATTTGCCAATAAAC CGGCCGCGGCA TGCGG TGCCGCAGCCG ATAGGATAAATTTAC TERM 2321 1941275 - 1941257 - f 70 -6.7 -4.08216 | GGAGGCCGTTGAAAA GCATGCC AATGG GACATGC AAACATGCTGTGGAA Atu1973 1941259 - 1941474 + | hypothetical protein cfa 1942549 - 1941524 - | cyclopropane-fatty-acyl-phospholipid synthase TERM 2322 1942349 - 1942331 - G 88 -3 -5.49729 | opp_overlap 1942331 1942334, overlap 1942289 1942318 AACCAGCGAAAAAAA TTCCGCGG GGA CCTCGTAA TGTTGTCTGTTCGCC Atu1975 1943334 - 1942546 - | hypothetical protein TERM 2323 1944439 - 1944416 - g 74 -3.8 -4.8048 | gap 1 TGGCTATACGAAAAA CCGCGCCGTGC TTC ACACGG-ACAG CAGTTTCATGCCACG TERM 2324 1944687 - 1944724 + G 73 -9 -3.9392 | opp_overlap 1944709 CGTCAGGAACTTTGG GCTCTGCAGGGCCTGC GAAACA GCTGGTTCTGCGGCGC TTATTTCGGATCGGG Atu1977 1943523 - 1944896 + | amine oxidase, flavin-containing TERM 2325 1945051 - 1945063 + G 70 -3.3 -4.58773 | TTTTTTCTCCGTGGA CCGGT TCA ACCTG TTTTCATTTCATCGC Atu1978 1944893 - 1945711 + | hypothetical protein Atu1979 1945698 - 1946930 + | cyclopropane-fatty-acyl-phospholipid synthase Atu1980 1946958 - 1947335 + | hypothetical protein Atu1981 1947376 - 1947807 + | hypothetical protein sigK 1947933 - 1948475 + | RNA polymerase sigma factor Atu1983 1948472 - 1949182 + | hypothetical protein fsrR 1950307 - 1949267 - | two component sensor kinase TERM 2326 1949773 - 1949763 - G 75 -8.2 -4.15044 | opp_overlap 1949742 1949763 TGCGTTTCCAACAAA GCGG TTT CCGC TTCCTGCGATTTCAC TERM 2327 1949914 - 1949936 + g 84 -9.8 -4.14739 | AACGGTCGGCCTCTT CCTTCGTCTG GCG CAGGCGATGG TTTTCCAGTGCCTGC TERM 2328 1950160 - 1950143 - G 72 -11.3 -3.35597 | overlap 1950141 1950154 CGCAGTCTGGAAATA GTGGTCG AGAA CGACCAC ATCGAACTGCCCGTT TERM 2329 1950225 - 1950202 - G 72 -11 -3.34344 | overlap 1950203 CGAGGCCGGAAGCAA CGGAGGTGGC GTGA ACCACCTCCA TACCGTGACGACCAA TERM 2330 1950261 - 1950244 - G 85 -12.7 -3.75024 | overlap 1950257 CGTGACGACCAAGAA CGCGGCT GGAA AGCCGCG CCAGAGCCGGGTCGT Atu1985 1950749 - 1950312 - | two component response regulator TERM 2331 1950659 - 1950672 + g 81 -4.5 -4.87665 | gap 1 TCTCGTTGTTCACGC CG-GCG CGC CGCACG TTTTTCTCGATCAGC Atu1986 1952200 - 1950746 - | two component sensor kinase TERM 2332 1951519 - 1951536 + g 71 -7.7 -4.00042 | gap 1 GGATTTCCTGATTGG CGCGGCGA AGA TC-CCGCG TTCTTTCCTCGACAC TERM 2333 1952107 - 1952129 + g 73 -10.6 -3.65046 | opp_overlap 1952097, overlap 1952097 GAAAACGGCGGAGTT CCGCTGTTTC CTG GGAATAGCGG TTATTCACCTGCACC TERM 2334 1952575 - 1952556 - g 85 -7.1 -4.77173 | CCTGGAGAAAATAAA CGCCACC GATCTG GATGGCG CCGTCATCGATCTGA Atu1987 1952410 - 1952784 + | two component response regulator Atu1988 1953830 - 1952838 - | two component sensor kinase TERM 2335 1953408 - 1953368 - G 71 -9 -3.71527 | opp_overlap 1953360 TGCGAATGATGGAAA CGACCATTGCCATCGTAT TCTTG ACACGATGGCTAAGCTCG CGGACGAGCAGCTCC TERM 2336 1953409 - 1953440 + g 71 -6.4 -4.24326 | gap 1 CGATGGCTAAGCTCG CGGAC-GAGCAGCTC CTT GTGCAGCTCCGCCCG TTTTCGCTCCTGTTT Atu1989 1954299 - 1953844 - | two component response regulator Atu1990 1956502 - 1954292 - | bacteriophytochrome protein TERM 2337 1955183 - 1955205 + g 81 -4.6 -4.91712 | CTGCACCGTCTTGTG CGGATCGCCG CCC CAGCGCACCG TTTTTATGACTTCCG TERM 2338 1956114 - 1956091 - G 79 -8 -4.56597 | opp_overlap 1956082 1956091 GCGCCGTCCGAAAAA GCGCGTCCTC CAGC GACGGCGCGC TGTTCAGATATTTCG Atu8024 1956634 - 1956741 + | hypothetical protein TERM 2339 1956997 - 1957019 + F 75 -12.6 -2.6927 | opp_overlap 1956984, overlap 1957002 AAGCTCTACAGATTT CGCTGCGGCG AAG CGCCGTTGCG TCGTCTGTGGCGCGT Atu1993 1957166 - 1958053 + | tRNA/rRNA metyltransferase TERM 2340 1958035 - 1958062 + F 84 -12.8 -3.34344 | gap 1, opp_overlap 1958042 AACGCAGCAATTTCT GGGCAAAGCGTCG TCC TGACGC-TTGCCC TTCCTTGCGAAATAA Atu1994 1958130 - 1958522 + | acyl-CoA hydrolase TERM 2341 1958619 - 1958631 + G 76 -10.5 -3.73224 | TTGCGCGCCTGCTGA CCGGC CTT GCCGG TTTCGTGCAGCATCC Atu1995 1958528 - 1959121 + | hypothetical protein Atu1996 1959637 - 1959143 - | hypothetical protein TERM 2342 1959234 - 1959260 + g 74 -7.2 -4.4261 | overlap 1959235 1959240 ACAGGAGTTCGGCGG GCGCCATCGCCA CGC TGGCGATTCTGC TTTTCCTGTTGCAGG TERM 2343 1959240 - 1959254 + g 76 -10 -3.71148 | overlap 1959235 1959234 GTTCGGCGGGCGCCA TCGCCA CGC TGGCGA TTCTGCTTTTCCTGT TERM 2344 1959703 - 1959725 + G 74 -5.5 -4.57837 | gap 1, overlap 1959705 1959720 TCATCCATCAATCTT TACC-GCGCC GTGT GGCGCTGGCA TTTTTACGCCGGTCT TERM 2345 1959765 - 1959784 + G 84 -10.6 -4.2074 | opp_overlap 1959763 GCCCTTCATGATATC GCTCGCCG TCAC CGGCGCGC TTTATCTCTTCCGGG TERM 2346 1960248 - 1960261 + G 77 -8.1 -4.30034 | overlap 1960256 CTGGCGCGATACCCA TGCCG TCAC CGGCA TTTTCGTCGGCTTTT cysJ 1959640 - 1961004 + | sulfite reductase TERM 2347 1961038 - 1961010 - T 100 -13.1 -5.03314 | opp_overlap 1961007 1961012, overlap 1961012 CGCAGCCTGAAAAAA TACGGCCGGGAGA GTA TATCCCGGCCGTG TGCTTCTGAATTCCT TERM 2348 1961012 - 1961036 + T 87 -15.7 -2.9796 | opp_overlap 1961012 1961010, overlap 1961007 CAGCCTGAAAAAATA CGGCCGGGAGA GTA TATCCCGGCCG TGTGCTTCTGAATTC TERM 2349 1961036 - 1961012 - T 100 -15.7 -4.14633 | opp_overlap 1961007 1961012, overlap 1961010 CAGCCTGAAAAAATA CGGCCGGGAGA GTA TATCCCGGCCG TGTGCTTCTGAATTC Atu1998 1961552 - 1961076 - | hypothetical protein Atu1999 1962175 - 1961564 - | hypothetical protein Atu2000 1962333 - 1962716 + | hypothetical protein TERM 2350 1965415 - 1965402 - g 76 -5.9 -4.63184 | AAGGCAGTGGAAAAA GCAGC AAAC GCCGC AACGAGTCGGTCTCC TERM 2351 1965623 - 1965604 - g 71 -5.6 -4.36127 | gap 1, overlap 1965606 GGGAAGAACCGAAAA GC-CCGTGC GCG GCGCGGTGC CCGACAAGCCCGGAA uvrB 1962842 - 1965808 + | excinuclease ABC subunit B TERM 2352 1966292 - 1966275 - g 83 -4.8 -5.13473 | ACCAGATCGAAAAAA CCCTGC CGGTGC GCAAGG ATCGTCAAGGCCGTG Atu2002 1965887 - 1966855 + | esterase/lipase Atu2003 1967314 - 1966889 - | hypothetical protein TERM 2353 1967268 - 1967290 + g 81 -7.6 -4.66163 | overlap 1967263 CGGTCGATGACCTCA GATGCTGCGG TCT CCTCCGCATC TTTTTCCGTAACCGT Atu2004 1967456 - 1967911 + | hypothetical protein TERM 2354 1967938 - 1967959 + F 100 -18.7 -4.37502 | GTTGTTCACTTGTTT CCCCCGCGC CGAG GCGCGGGGG TTTTCGTATGATCAT Atu2005 1968100 - 1968708 + | hypothetical protein dnaJ 1969321 - 1968719 - | DnaJ family molecular chaperone Atu8168 1969706 - 1970059 + | hypothetical protein TERM 2355 1970783 - 1970768 - g 78 -10.4 -3.88583 | overlap 1970758 GAAACCCGCCAGAAA CTCGCG CAAT CGCGAG AGGCCGTAGACGCGG Atu2010 1970408 - 1972147 + | GGDEF family protein Atu2011 1973138 - 1972179 - | hypothetical protein TERM 2356 1972765 - 1972742 - G 73 -10.2 -3.65199 | opp_overlap 1972753 1972756 AATGCGTGACGTAAA GGGTCAGCGG CTTG CCGCCGATCC GGAGGTCAATTTCCA Atu2012 1974376 - 1973348 - | ABC transporter, nucleotide binding/ATPase protein Atu2013 1976058 - 1974364 - | ABC transporter, membrane spanning protein TERM 2357 1975467 - 1975440 - G 76 -6.8 -4.53602 | overlap 1975441 TGGACACGAAAGAAA TCGCCGCACCCG CGAT CAGGCCCGGCGT GGAAAGCGGCAGGAT TERM 2358 1976037 - 1976009 - G 100 -19.7 -4.48072 | opp_overlap 1976003 1976013 1976016 ACACTCACCACAAAA GGAAACAGCCAGC GCG GCTGGCTGCTTCC ATAAGCTTTGGAACG Atu2014 1977051 - 1976068 - | ABC transporter, substrate binding protein Atu2015 1978604 - 1977360 - | aminotransferase TERM 2359 1978672 - 1978683 + H 74 -4.4 -4.7153 | opp_overlap 1978672, overlap 1978662 1978657 GATATGTCAGCAATA CTGA CTTA TCAG TTTTTCGAATTATTT TERM 2360 1978724 - 1978743 + H 71 -4.8 -4.56597 | overlap 1978726 GCACGGTGTCCGCCA CAGCCCCG CATT CGCGGCCG TTTTTCCGGACAAAG TERM 2361 1979253 - 1979280 + G 70 -4.8 -4.45517 | gap 1, opp_overlap 1979269, overlap 1979254 1979255 GGCCAAGCAGGCCTA TTGCGTCATCACC ACA GGCGA-GACGCGG TTTTATGGATGCTTT Atu2016 1978879 - 1979328 + | hypothetical protein Atu2017 1979602 - 1979333 - | hypothetical protein TERM 2362 1979438 - 1979408 - G 71 -8.3 -4.05747 | gap 1, opp_overlap 1979411, overlap 1979397 1979409 1979412 TACACGGTAGACAAA CCGATGCTCGGCGG TAAT CCGCCGAG-ACCAA TATCCTGCCATATCG Atu2018 1979853 - 1979599 - | hypothetical protein TERM 2363 1979964 - 1979943 - R 100 -15.1 -4.52415 | opp_overlap 1979939 1979936 ACCGATAACAAGAAA GGCCGGAGC TTTC GCCCCGGCC TCCATGTCTTCCACC ilvC 1981011 - 1979992 - | ketol-acid reductoisomerase TERM 2364 1980442 - 1980420 - G 70 -10.6 -3.48593 | opp_overlap 1980420 1980419, overlap 1980407 GACCGCCGCACAGAA CGACCTGTTC GCC GAAGAGGTCG GTTTCGCACTCTTCC Atu2020 1981712 - 1981059 - | TetR family transcriptional regulator TERM 2365 1981131 - 1981119 - G 78 -6.9 -4.61633 | opp_overlap 1981119, overlap 1981109 ATAGAGCGTCAAAAA GGCGA CGA CCGCC TTCTTGGCCCGGGCG TERM 2366 1981248 - 1981219 - G 70 -3.6 -4.58663 | gap 1, opp_overlap 1981220, overlap 1981202 1981220 ATGAGGCCGTAAAAA CTGCGAT-ACGCC TCTTC GGCGTCATCGAAA CGCAGGTAGCCGGAA TERM 2367 1981275 - 1981249 - G 73 -10 -3.64703 | overlap 1981250 TCGGCGTCATCGAAA CGCAGGTAGCCG GAA CGGCGACCCGCC TCGATCAGTCCACGG TERM 2368 1981274 - 1981250 - G 73 -13.5 -2.78679 | overlap 1981249 CGGCGTCATCGAAAC GCAGGTAGCCG GAA CGGCGACCCGC CTCGATCAGTCCACG Atu2021 1983017 - 1982112 - | AraC family transcriptional regulator TERM 2369 1982252 - 1982289 + g 86 -14.1 -3.44051 | gap 1 CATCCAGCCGCTCCA GCAGCATCAGCCGGCGCG CCT CGTGCAGGC-GAAGCTGC TTCTGATACTGCACC adh 1983207 - 1984253 + | NADP-dependent alcohol dehydrogenase TERM 2370 1984276 - 1984310 + T 100 -12.8 -4.3255 | opp_overlap 1984278 1984281, overlap 1984281 AGAGACGACCAAATA AACAAGGGCGGGAAGC CAT GCTTCCCGCCCTTTCC TTTGTTACTTCAGGC TERM 2371 1984308 - 1984278 - T 100 -19.8 -4.52345 | opp_overlap 1984276 1984281, overlap 1984281 AGACGACCAAATAAA CAAGGGCGGGAAGC CAT GCTTCCCGCCCTTT CCTTTGTTACTTCAG TERM 2372 1984281 - 1984305 + T 100 -21.5 -4.23652 | opp_overlap 1984278 1984281, overlap 1984276 CGACCAAATAAACAA GGGCGGGAAGC CAT GCTTCCCGCCC TTTCCTTTGTTACTT TERM 2373 1984305 - 1984281 - T 100 -21.5 -4.35958 | opp_overlap 1984281 1984276, overlap 1984278 CGACCAAATAAACAA GGGCGGGAAGC CAT GCTTCCCGCCC TTTCCTTTGTTACTT ndh 1985585 - 1984320 - | NADH dehydrogenase TERM 2374 1984643 - 1984618 - G 79 -12.5 -3.48395 | gap 1, opp_overlap 1984618 1984636 ACCTTTGCCACATAA GCGCCCTGCTGC TTT GCCGC-GGGCGC GATGCCCGGCACCGG TERM 2375 1984650 - 1984665 + g 71 -6.1 -4.3534 | overlap 1984636 CGCGGGCGCGATGCC CGGCA CCGGCT TGCCG TTTTCCTGATTGACC TERM 2376 1985628 - 1985604 - R 95 -14.3 -3.53012 | TCTTTGCCTTCCAAA GCTCGCGCACG GAG CATGCGCAAGC CAAAGCATAGGCGAA pdxJ 1986413 - 1985658 - | pyridoxal phosphate biosynthetic protein PdxJ TERM 2377 1986075 - 1986062 - G 72 -2.3 -4.83615 | CATCTTTCAGAAAAA CAGCA TGTT TGCGG AAATCCCAGCCGTGG Atu2025 1986648 - 1987343 + | transcriptional regulator Atu2026 1988471 - 1987344 - | exodeoxyribonuclease V TERM 2378 1988031 - 1988007 - G 100 -14.9 -5.00616 | overlap 1988021 CTGCTCGGTAAAAAA GCCGCCGCCCG AAA CCGGCGGCAGC TGGCCGGGATCACCA TERM 2379 1988409 - 1988383 - G 76 -12.3 -3.28712 | gap 1, opp_overlap 1988382 1988394, overlap 1988399 CCCGTTCCGGCATAA CCGAACAGCCGG AAAA CCGGC-GTCCGG CCTTCTTTCAGCCAG TERM 2380 1988409 - 1988399 - G 75 -8.2 -4.14472 | opp_overlap 1988382 1988394, overlap 1988383 CGAACAGCCGGAAAA CCGG CGT CCGG CCTTCTTTCAGCCAG Atu8169 1989033 - 1988551 - | hypothetical protein Atu2028 1989404 - 1989030 - | ArsR family transcriptional regulator TERM 2381 1989711 - 1989727 + G 75 -2.9 -5.00616 | overlap 1989710 GTTACGACAAATGCG CGGTG AACTGGC CGCCG TTTTTTGCAGCCGCC TERM 2382 1989860 - 1989850 - g 72 -2.4 -4.84274 | overlap 1989851 1989852 CAAGGACACGAAAAA GGGC GAC GCCA CCGGCGACGGTATGA Atu2029 1989524 - 1989904 + | hypothetical protein TERM 2383 1989943 - 1989923 - g 100 -18.3 -4.15106 | CATGAATGGTGAAAA GCGGGGGAG CCA CTCCCCCGC AACCGGCAGCTTCGA TERM 2384 1990412 - 1990392 - g 72 -11.1 -3.34398 | opp_overlap 1990390, overlap 1990390 CGCGCCCGCGAAACA CTTCGCCAG CAT CTGGCGGAG GATAATATCATACCC Atu2030 1989909 - 1990445 + | ECF family RNA polymerase sigma factor Atu2031 1990442 - 1991230 + | hypothetical protein Atu2032 1991410 - 1992255 + | aldo/keto reductase TERM 2385 1992372 - 1992353 - T 100 -16.4 -3.69373 | opp_overlap 1992361 1992364 TAAAGATTGCAATAA CGGCGCGG CAAG CCGCGCCG TCGGTCAGATAGCCC Atu2033 1992928 - 1992395 - | hypothetical protein Atu2034 1993289 - 1992921 - | ArsR family transcriptional regulator TERM 2386 1993367 - 1993386 + r 80 -10.6 -3.88583 | opp_overlap 1993368, overlap 1993368 GGATTCCATAAAAAA ACCCGCGG CGAA CCGCGGGC TTTATGGAAGATTTC TERM 2387 1993385 - 1993368 - R 100 -14.1 -5.626 | opp_overlap 1993367 1993368 GATTCCATAAAAAAA CCCGCGG CGAA CCGCGGG CTTTATGGAAGATTT TERM 2388 1993368 - 1993385 + r 86 -14.1 -2.92668 | opp_overlap 1993368, overlap 1993367 GATTCCATAAAAAAA CCCGCGG CGAA CCGCGGG CTTTATGGAAGATTT ilvH 1993987 - 1993415 - | acetolactate synthase 3 regulatory subunit TERM 2389 1993867 - 1993892 + g 74 -12.5 -3.14132 | opp_overlap 1993859 1993862 CGGAAAACAGGCCGA TGACCCGGGCG AGAA CGCCCGGCTCG TTGCTGACGAGAACC ilvI 1995800 - 1994007 - | acetolactate synthase 3 catalytic subunit TERM 2390 1995135 - 1995153 + g 71 -8.8 -3.77832 | ATTGATGACGCCGCC GCCGGTGT AAA AAACCGGC TTCTTCGCTTTCGAC TERM 2391 1995886 - 1995871 - H 100 -8.2 -5.80248 | opp_overlap 1995871 GAAGACATAAAAAAA GGCCCC TAGA GGAGCC TCGTTCAGCGCATGG TERM 2392 1997855 - 1997882 + G 70 -4.8 -4.56597 | gap 1, opp_overlap 1997845 1997846, overlap 1997856 CCAAACCCGTTATCA CCGGCTTCCA-GC AAA GCGTGGAAGCGGC TTTTTCCGACCAGCC TERM 2393 1998170 - 1998160 - g 81 -4.6 -5.00884 | AGCCTGTTGAAAAAA CCGC TCG GCAG CCTCTACCGCAAGGA Atu2038 1996183 - 1998189 + | hypothetical protein miaA 1999093 - 1998197 - | tRNA delta(2)-isopentenylpyrophosphate transferase TERM 2394 1998266 - 1998286 + gF 91 -7.5 -4.9792 | overlap 1998268 CTGCCGTTTGGCATA TTGGCGGGT CGC AGCCGCCGA TTTTTCTATCACCTC serB 1999092 - 1999982 + | phosphoserine phosphatase TERM 2395 2000374 - 2000353 - g 71 -7.3 -4.25104 | opp_overlap 2000353 GGCTTTCGATGAAAA GGAGACG CCGGAAAT CGTCTCC TTTGCCGTCCACGAC Atu2041 1999979 - 2000542 + | acetyltransferase Atu2042 2001317 - 2000568 - | short chain dehydrogenase TERM 2396 2001270 - 2001243 - G 78 -9.9 -3.85698 | gap 1, overlap 2001246 2001248 GCCTTGCGTGACAAA CAGCATC-GCCG TCGCC CGGCCGATGCCG GATGACGCGCCGGTG Atu2043 2002951 - 2001407 - | htrA family protein TERM 2397 2003124 - 2003097 - R 100 -15.6 -4.75404 | overlap 2003101 AAAGCGGAGTAAAAA GAAAGGGCCGGT AAAA ACCGGCCCCTCC AAAATCATTCGATCC TERM 2398 2003120 - 2003101 - R 100 -15 -4.91852 | overlap 2003097 CGGAGTAAAAAGAAA GGGCCGGT AAAA ACCGGCCC CTCCAAAATCATTCG hflC 2004067 - 2003144 - | HFLC protein hflK 2005187 - 2004069 - | HFLK protein TERM 2399 2004276 - 2004260 - G 71 -8.7 -3.74077 | GGTCATAGATGGAAA TGAAGCG CTG CGCCTCA CCTTCCGCCTCGTTG TERM 2400 2005101 - 2005125 + g 71 -7.8 -4.00042 | gap 1, overlap 2005105 GTTAGGCCCCTGCCC CCATGGGCCGC CACC GCCGCCC-TGG TTGTTTCCTCCACCG folA 2005858 - 2005331 - | dihydrofolate reductase thyA 2006649 - 2005855 - | thymidylate synthase TERM 2401 2006576 - 2006609 + g 77 -10.9 -3.65902 | gap 1 AATACCGAACGCGTG CCGGTGCCGGT-GCGG TCT CCGCGGTCGGAGCCGG TTTCCATCACATGCC Atu8170 2007050 - 2006742 - | hypothetical protein TERM 2402 2007342 - 2007317 - H 70 -3.1 -4.72272 | opp_overlap 2007317 2007320 CGCCTCCACCAAAAA CCGGCGGGATC TCAA GATGAGGCCGG CTTTTGATGGGGGCG Atu8171 2007792 - 2008298 + | hypothetical protein TERM 2403 2008445 - 2008425 - f 100 -9.7 -5.63236 | opp_overlap 2008427, overlap 2008440 AGCGAAAAAGAAAAA CAGGCGG AGCAGAA CCGCCTG TCTCACGGCCGTACC Atu2051 2008675 - 2008884 + | hypothetical protein TERM 2404 2009232 - 2009252 + T 76 -12.6 -2.79796 | ATCCCCTGGGCGTCA TCCTCGGC CCTGT GCCGAGGA TCTAATCACGTCGAA Atu2052 2013079 - 2009375 - | hypothetical protein TERM 2405 2009648 - 2009663 + g 71 -8.2 -4.07885 | GTAGAGCGCCACTTC GCGGCG CAGG CGCTGC TTTTCAAGAACGCTG TERM 2406 2009982 - 2009972 - G 71 -6.8 -4.20084 | overlap 2009950 2009951 ACCATTCAGCGAAAA TGGC AGT GCCA CATCACCGAGCGCAA Atu2053 2014583 - 2013171 - | FAD dependent oxidoreductase TERM 2407 2014425 - 2014415 - G 76 -6.8 -4.56597 | overlap 2014416 CGCTTTCGGCAAAAA CGAC ACC GTCG GGCGCCTGCAGGGTC Atu2054 2017859 - 2014713 - | AcrB/AcrD/AcrF family protein TERM 2408 2015470 - 2015484 + g 74 -7.1 -4.41494 | opp_overlap 2015450 TGCTCGCGGTTCAAC TGCGG CGCAA CCGCA TTTTCCTTGAGCGTG Atu2055 2019007 - 2017856 - | HlyD family secretion protein TERM 2409 2018541 - 2018563 + g 70 -3.4 -4.66163 | overlap 2018543 AGGCGGGAGAAAGAT TTCAGGTTCT TGT AGGAACTGGA TTTTTCAATGGCGCT TERM 2410 2018762 - 2018776 + g 75 -2.8 -5.00616 | overlap 2018764 GATGGCGTTCAGCCG GTCATT GAC AATGCC TTTTTTCGCCGGAGC Atu2056 2019232 - 2019642 + | hypothetical protein TERM 2411 2019712 - 2019696 - f 73 -5.1 -4.66987 | opp_overlap 2019696, overlap 2019697 GATACCGGAATAAAA GCAGAAC ACG GTTCTGG CCTTTATATCCCGAA TERM 2412 2020875 - 2020860 - g 71 -5.4 -4.30576 | gap 1, overlap 2020861 TCCGGACGATGAAAA GGTCGTG GTG CACG-CC GCCTGGGATTCGGAA TERM 2413 2021167 - 2021147 - g 76 -13.3 -3.04263 | AGCGGATCGTCAATA CGCCAAAGC GTG GCCTTGGCG ATACGACGATCCGTA pcrA 2019745 - 2022219 + | DNA helicase II TERM 2414 2022613 - 2022646 + G 81 -8.2 -4.71828 | ATGCCGATATCGCGC TCATCCTTGAGGAC GACGTG GTCTTCGAGGACGA TTTTCTTGATGCCAT Atu2058 2022516 - 2023136 + | hypothetical protein TERM 2415 2023236 - 2023211 - T 70 -5.5 -4.48987 | gap 1, opp_overlap 2023211 2023214 2023217, overlap 2023213 2023215 CTGCGAGAATGAAAA TAGAGATGACGA AAA TCGTCATC-CTG TTCAATGGTTTGCGG TERM 2416 2023234 - 2023213 - T 71 -8.1 -3.85296 | gap 1, opp_overlap 2023211 2023214 2023217, overlap 2023211 2023215 GCGAGAATGAAAATA GAGATGACGA AAA TCGTCATC-C TGTTCAATGGTTTGC TERM 2417 2023233 - 2023215 - T 81 -11.8 -3.50325 | opp_overlap 2023214 2023211 2023217, overlap 2023213 2023211 GAGAATGAAAATAGA GATGACGA AAA TCGTCATC CTGTTCAATGGTTTG Atu2059 2023926 - 2023333 - | TetR family transcriptional regulator Atu2060 2024037 - 2024963 + | ABC transporter, substrate binding protein (glycine betaine) Atu2061 2024960 - 2025820 + | hydrolase Atu2062 2025940 - 2026398 + | hypothetical protein Atu2063 2026395 - 2026820 + | hypothetical protein Atu2064 2028133 - 2026847 - | hypothetical protein pncA 2028591 - 2029217 + | pyrazinamidase/nicotinamidase Atu2067 2029464 - 2029228 - | hypothetical protein TERM 2418 2030014 - 2030026 + G 74 -3.3 -4.77438 | opp_overlap 2030012, overlap 2030012 2030012 GGAAATACGAGAACA CCGGT ACG GTCGG TTTTTCCTGGTACAT Atu2068 2029650 - 2030372 + | hypothetical protein Atu2069 2030369 - 2030683 + | hypothetical protein Atu2070 2032521 - 2030680 - | aminopeptidase P TERM 2419 2031222 - 2031251 + g 76 -14.3 -2.65264 | gap 1, opp_overlap 2031209, overlap 2031237 AACGCCTCTGCTCTT CCGGCACCG-TGCC GAT GGCAACGGTGCGGG TGATATCAGTGGTGC TERM 2420 2031762 - 2031799 + g 81 -14.1 -3.28924 | opp_overlap 2031772 GCTGCGTCGCCAGTT GCGCGAGATAGGCCTCG GCCT CGATGCCGGTCTTGCGC TTGTCGAGAAAAATA TERM 2421 2031858 - 2031813 - G 74 -3.2 -4.82901 | gap 1, overlap 2031815 GCTTGTCGAGAAAAA TATCCGCCTTGCCGTCGGCAT AAATG ATACCGCGGGCGA-GCGGATG CGGCGTGTGCGGCAC Atu2071 2032993 - 2032766 - | hypothetical protein TERM 2422 2033081 - 2033100 + r 100 -16.4 -5.18371 | GCTCGCGGGTTTCCA GGCGGCGC GAAA GCGCCGCC TTTTCTTTTGTCCGA prmA 2034013 - 2033135 - | ribosomal protein L11 methyltransferase sco1 2034701 - 2034093 - | membrane protein Atu2074 2035157 - 2034843 - | hypothetical protein cheW 2035226 - 2035693 + | chemotaxis protein Atu2076 2036392 - 2035901 - | hypothetical protein Atu2077 2037048 - 2036440 - | DNA polymerase III, epsilon subunit Atu2078 2037994 - 2037092 - | LysR family transcriptional regulator TERM 2423 2038399 - 2038411 + G 70 -3.3 -4.59773 | GCCGCGTGAATGGGC GGTGT GGC GCGCC TTTTTCGGCATGGGC Atu2079 2038211 - 2039122 + | ABC transporter, membrane spanning protein Atu2080 2039307 - 2039840 + | acetyltransferase kka 2040738 - 2039845 - | aminoglycoside phosphotransferase Atu2082 2042977 - 2040803 - | NAD-dependent DNA ligase LigA TERM 2424 2041601 - 2041587 - G 71 -9.2 -3.83026 | GCCCGGCAGACGAAA CCGCCG GTG CAGCGG GTGACCGAATCGAGC recN 2044775 - 2043102 - | DNA repair protein RecN TERM 2425 2043662 - 2043678 + g 76 -9.3 -4.07568 | overlap 2043663 CCCCCGATAGCGCCT CCGCCGC ATT GCGGCGC TTTTCGGAAAGCGAC TERM 2426 2043663 - 2043677 + g 72 -12.8 -3.04398 | overlap 2043662 CCCCGATAGCGCCTC CGCCGC ATT GCGGCG CTTTTCGGAAAGCGA TERM 2427 2043709 - 2043689 - G 79 -12.5 -3.53012 | overlap 2043690 GGCGCTTTTCGGAAA GCGACCGGG CGG CCCGGTCGA AATCAGCCTTCACGA TERM 2428 2043708 - 2043690 - G 79 -16 -2.71712 | overlap 2043689 GCGCTTTTCGGAAAG CGACCGGG CGG CCCGGTCG AAATCAGCCTTCACG TERM 2429 2043743 - 2043753 + g 70 -3.2 -4.63218 | overlap 2043738 CGAGATTGGCCTCGA GCTT GCC GAGC TTTTCTTCGCCGGCA TERM 2430 2044732 - 2044706 - G 80 -10.9 -3.76373 | gap 1, opp_overlap 2044706, overlap 2044700 CCGTCAACACGGAAA GGCCCG-CCTCA AAAC TGAGGTCGAGCC TTTCAATCAGAACGA Atu2084 2045657 - 2044791 - | hypothetical protein TERM 2431 2045833 - 2045867 + r 75 -13.1 -2.56914 | gap 2, opp_overlap 2045840, overlap 2045840 TCCTGCCCCGCCTCA CA-AAAAAGCCGC-CCC AAG GGGAGCGGCTTTTTCTG TCAATTGATAGCCTG TERM 2432 2045840 - 2045859 + r 100 -11.4 -5.00642 | gap 1, opp_overlap 2045840, overlap 2045833 CCGCCTCACAAAAAA GCCGC-CCC AAG GGGAGCGGC TTTTTCTGTCAATTG TERM 2433 2045859 - 2045840 - R 100 -12.8 -5.24129 | opp_overlap 2045840 2045833 CCGCCTCACAAAAAA GCCGCCCC AAGG GGAGCGGC TTTTTCTGTCAATTG lpxC 2046848 - 2045892 - | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase TERM 2434 2047098 - 2047065 - R 100 -21.9 -4.73092 | opp_overlap 2047070, overlap 2047070 ATAACGTAAAATAAA CAAAACGCCCGGATC GTGA GATCCGGGCGTTTCG AAGAGCGTATGGAAT TERM 2435 2047093 - 2047070 - R 100 -18.2 -5.26247 | opp_overlap 2047070, overlap 2047065 GTAAAATAAACAAAA CGCCCGGATC GTGA GATCCGGGCG TTTCGAAGAGCGTAT TERM 2436 2047070 - 2047093 + r 100 -18.2 -3.53563 | opp_overlap 2047070 2047065 GTAAAATAAACAAAA CGCCCGGATC GTGA GATCCGGGCG TTTCGAAGAGCGTAT ftsZ2 2048870 - 2047119 - | cell division protein FtsZ ftsA 2050294 - 2048963 - | cell division protein TERM 2437 2049158 - 2049107 - G 71 -8.4 -4.08216 | overlap 2049108 2049135 GCAGGCGGTTGAAAA TGCCGGTCCCTTGGCCGCTACCGG AAGA CCGGCCACGCCCATGGGGCGGCCA ATACGAACGTTGCGG ftsQ 2051244 - 2050291 - | cell division protein TERM 2438 2050473 - 2050483 + gr 85 -6.8 -4.77165 | overlap 2050466 2050465 CCAGCAATTGCAGCG CCTG CGG CAGG TTTTCTTCTGGCAGC TERM 2439 2050677 - 2050697 + gr 83 -4.6 -5.08824 | gap 1, opp_overlap 2050691 ATTTATTGTCACGCA GCGGC-GCG ATGA CACTGCCGC TTTTTTCGATCAGCG ddlB 2052137 - 2051211 - | D-alanine--D-alanine ligase TERM 2440 2052401 - 2052390 - H 91 -7.2 -4.88918 | overlap 2052391 TGATCGGAAATAAAA CCGC CCTG GCGG GTTCGCCACTTCGCG TERM 2441 2052628 - 2052615 - H 78 -2.3 -5.16841 | overlap 2052616 CCATAGGAACAAAAA TTGCG TTAA CGCAG TCCCTGCCTTCCAAG TERM 2442 2052779 - 2052791 + G 77 -3.3 -4.92239 | overlap 2052770 2052787 TGCCAGCCTGGTCGG CACGA CCA TCGAG TTTTTCGATTTTTAC TERM 2443 2052787 - 2052799 + G 74 -4.1 -4.81249 | overlap 2052770 2052779 TGGTCGGCACGACCA TCGAG TTT TTCGA TTTTTACGTTTACGC TERM 2444 2052917 - 2052936 + G 71 -7.8 -4.12198 | gap 1 CATCGCCTTTTTCGC CCGCC-CGC TCG GCGCGGTGG TTTTCGGCCATTATG Atu2090 2052681 - 2053985 + | ABC transporter, membrane spanning protein (sugar) TERM 2445 2054004 - 2054039 + T 100 -19.2 -2.87444 | opp_overlap 2054009, overlap 2054009 GAGACCATCGACGTC AAAAAGCCCGCGAAAC CTTC GTTTCGCGGGCTTTTC CTTGTCTATTTCTGC TERM 2446 2054009 - 2054034 + T 100 -19.1 -4.55544 | opp_overlap 2054009, overlap 2054004 CATCGACGTCAAAAA GCCCGCGAAAC CTTC GTTTCGCGGGC TTTTCCTTGTCTATT TERM 2447 2054034 - 2054009 - T 100 -19.1 -4.62783 | opp_overlap 2054004 2054009 CATCGACGTCAAAAA GCCCGCGAAAC CTTC GTTTCGCGGGC TTTTCCTTGTCTATT Atu2091 2054864 - 2054055 - | GGDEF family protein TERM 2448 2054480 - 2054460 - G 70 -4 -4.60041 | gap 1 ATCGATGTCCAAAAA GGCAAC-AC AATA GTCGCTGCC AAGTTCGGCGCATGC TERM 2449 2055029 - 2054986 - R 75 -6.1 -4.63928 | gap 1, opp_overlap 2054995, overlap 2054987 2054988 AGATTATGGCAAAAA TCGTTGAT-CGACCGTTACG ATAAA CGCAACGGTCTTATCAACAC TCGTATTTTCTTTCA TERM 2450 2055028 - 2054987 - R 70 -9.6 -3.37634 | gap 1, opp_overlap 2054995, overlap 2054986 2054988 GATTATGGCAAAAAT CGTTGAT-CGACCGTTACG ATAAA CGCAACGGTCTTATCAACA CTCGTATTTTCTTTC murB 2056031 - 2055066 - | UDP-N-acetylenolpyruvoylglucosamine reductase TERM 2451 2055679 - 2055649 - G 80 -11.1 -3.71883 | opp_overlap 2055666, overlap 2055642 TAATAGAAGTGGAAA CCGCCAATGCCAT TATCC ATGGCCATGGCGG CAATGTGCTTGTCCG murC 2057443 - 2056028 - | UDP-N-acetylmuramate--L-alanine ligase murG 2058576 - 2057440 - | N-acetylglucosaminyl transferase TERM 2452 2058554 - 2058530 - G 74 -12.8 -3.24232 | overlap 2058528 2058526 TCCGCCGGAAACACA TGGCCGCCGG TTCCC CCGGCGGCAA GAAGAACAATACCCT ftsW 2059737 - 2058583 - | cell division protein murD 2061151 - 2059742 - | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase mraY 2062255 - 2061155 - | phospho-N-acetylmuramoyl-pentapeptide-transferase murF 2063712 - 2062279 - | UDP-MurNAc-pentapeptide synthetase murE 2065178 - 2063709 - | UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase TERM 2453 2064480 - 2064491 + g 78 -7.2 -4.66163 | opp_overlap 2064479 GTCAGCAAAGATCAC GGCG GGAG CGCC TTTTTCCATCAGCGT pbpB1 2066978 - 2065236 - | penicillin binding protein 2 TERM 2454 2065928 - 2065914 - G 73 -4.2 -4.66987 | overlap 2065916 2065922 GATATTCGAAGAAAA CTGGAA GAT TTCCGG CACCGAAAGCATCCG TERM 2455 2066841 - 2066851 + g 71 -8.2 -4.13767 | opp_overlap 2066840 2066841 ACCGAAAATGAGAAG GCCG ACG CGGC TTTTCGCCTGGGCAG Atu2101 2067544 - 2066978 - | hypothetical protein mraW 2068571 - 2067546 - | S-adenosyl-methyltransferase MraW TERM 2456 2068012 - 2068038 + g 80 -10.9 -3.8211 | gap 1, opp_overlap 2067997 CCAGCCAGATCGCGG GTGGTGCGGAAG GGTT CTTCCGC-CCGC TTCTTCTCGATGGCG TERM 2457 2068062 - 2068074 + g 78 -6.9 -4.63218 | overlap 2068051 GATGGCGCGGGCGAT GCGGC CCG GCTGC TTTTCTTCACCGAGA Atu2103 2069026 - 2068586 - | cell division protein MraZ TERM 2458 2069056 - 2069044 - H 70 -6.9 -4.11484 | overlap 2069045 CTCAACTCGCCAAAA CCGCG TTC CGCGA AGCGAACCATCCACT Atu2104 2069732 - 2070133 + | hypothetical protein Atu2105 2070143 - 2070739 + | hypothetical protein tnp 2072819 - 2071281 - | IS3 family transposase solA 2075183 - 2073993 - | sarcosine oxidase TERM 2459 2074306 - 2074321 + g 70 -4.6 -4.4648 | CATTCGCGGATCTCC GGGTCG CTGC CCACCC TTTTATCATCGGGAT TERM 2460 2074617 - 2074586 - G 82 -11.4 -3.85698 | opp_overlap 2074603 GTTCTGCGGTATAAA CCGCGCCCGAGGCC GTCT GGACCGAGGCGCGG CCATCCTCTTCCCGC TERM 2461 2075271 - 2075254 - R 86 -6.9 -4.98522 | AATGTCAGACAAAAA CCGGCGA CATT TCGGCGG CGAACTCATCCTCGG solA 2076430 - 2075243 - | sarcosine oxidase slt 2077062 - 2076523 - | soluble lytic transglycosylase TERM 2462 2077091 - 2077074 - R 74 -2.7 -4.89852 | gap 1 TCATATGTAGAAAAA GTC-TCCA GAT CGGATGAC AGAAACAGTGAAATG TERM 2463 2077275 - 2077261 - R 100 -5.6 -5.55769 | TGGCACAACAAAAAA GCGACT TGG AGGCGC TGGAAAAACGGGAAT Atu2113 2078089 - 2077310 - | N-acetylmuramoyl-L-alanine amidase TERM 2464 2077584 - 2077541 - G 76 -6.4 -4.56597 | GCCGCGCTGGAAAAA GCGTCCGCCGCGGATCGGCG CGGG CTCCACCCAGTGGCCGACGC CGTGCTGCGACAGGA djlA 2078823 - 2078086 - | DnaJ family molecular chaperone pfp 2079158 - 2080369 + | pyrophosphate--fructose-6-phosphate 1-phosphotransferase Atu2116 2080422 - 2081057 + | hypothetical protein TERM 2465 2081609 - 2081587 - g 70 -12.7 -2.93723 | gap 1, opp_overlap 2081586 2081585, overlap 2081563 2081585 2081582 GCCGCAGCAACGACA GCCGC-GCCG ACCA CGGCCGCGGC ACTTGTACCGACACA Atu2117 2081194 - 2082270 + | lytic murein transglycosylase TERM 2466 2082294 - 2082311 + F 95 -8.3 -5.03715 | opp_overlap 2082271 GCCTGTGCTGGAGAC GCCGCGC AGCT GAGCGGC TTTTTTGAAAATGCT TERM 2467 2083203 - 2083226 + G 77 -3.7 -5.00616 | opp_overlap 2083201, overlap 2083205 GAAATGGCCAAGACC CGGACGCTG GACGAA CAGCGCCAG TTTTTTGACAGCAAG TERM 2468 2083547 - 2083529 - g 77 -11.7 -3.65603 | overlap 2083520 2083519 AAAGATCCGCAACAA CACCGCG CGCGT CGCGGTG CATCACGCCACCTAT Atu2119 2082612 - 2083862 + | hypothetical protein TERM 2469 2084301 - 2084282 - g 73 -4.9 -4.59773 | overlap 2084291 CCGGACTGGGAAAAA GCGATCG AACAGG CGCTCGC GGCGCTGAAACCCGG Atu2120 2083913 - 2084578 + | O-methyltransferase TERM 2470 2084641 - 2084598 - f 74 -6.5 -4.24342 | CGGCGGATTAAGAAA CCCGACCGACCCCATGCGG CATCGT CCTCAAGGCTTCTGTCGGG CCCAATCTCCGCACT TERM 2471 2084692 - 2084661 - f 84 -8.8 -4.25283 | gap 1, overlap 2084662 2084682 2084686 2084687 ATCTCCGCACTAAAA CCGCAAATCGCTTGG AAT CCA-GCAACTTGCGA GGTGCAAAAAACGCG TERM 2472 2085589 - 2085563 - g 75 -3 -4.91712 | overlap 2085564 CGGAAGTGAGAAAAA CTGGCGAAAA TGGATTG CTTCCGCCAA ATAAGGCGGCCAAGA lyc 2084742 - 2085593 + | glycosyl hydrolase/lysozyme TERM 2473 2085646 - 2085623 - f 83 -7.5 -4.59511 | gap 1, opp_overlap 2085642 2085645, overlap 2085624 2085625 AACACTTTCGAAAAA TC-GGCGTTG TTCTG CAACGCCAGA TCGTCCGGTCCGTTT mltB 2085717 - 2086943 + | lytic murein transglycosylase TERM 2474 2087018 - 2087041 + T 93 -10.3 -4.42765 | TTAATCTCGACCGGG TGACTGGGG ATAACA CCCCGGTCA TTTACTTTTTTAAAG TERM 2475 2087376 - 2087353 - T 100 -16 -4.76892 | opp_overlap 2087353 ACACGAATTTAAAAA GCGCAGGCCC CGAG GGACCTGCGC TTTTTTCATGTCGGT TERM 2476 2087353 - 2087376 + T 100 -14.6 -5.22312 | gap 1, opp_overlap 2087353 ACACGAATTTAAAAA GCGCAGG-CCC CGA GGGACCTGCGC TTTTTTCATGTCGGT metF 2088298 - 2087408 - | methylenetetrahydrofolate reductase Atu2124 2089316 - 2088303 - | ArsR family transcriptional regulator TERM 2477 2089433 - 2089452 + r 85 -12.8 -3.53761 | opp_overlap 2089433 TATTGCACGAGAAAA GGCCCGCT TTGC GGCGGGCC TTTCCGAAGAGATTC TERM 2478 2089452 - 2089433 - R 95 -12.1 -4.46926 | opp_overlap 2089433 TATTGCACGAGAAAA GGCCCGC TTTGCG GCGGGCC TTTCCGAAGAGATTC chvD 2091127 - 2089478 - | putative ABC transporter ATP-binding protein TERM 2479 2089540 - 2089550 + g 74 -6.8 -4.35461 | overlap 2089527 CCGGGCCGAGACGGC GGAC CTT GTCC TTTTCGTAATCTTCG TERM 2480 2090645 - 2090629 - G 77 -11.5 -3.57615 | overlap 2090620 2090618 GCAAGAGCTTGCAAA GCGCCAC ACG GCGGCGC TCACCACCCGAAAGG Atu2126 2091272 - 2092249 + | hypothetical protein caiB 2092326 - 2093528 + | L-carnitine dehydratase iivG 2093537 - 2095189 + | acetolactate synthase 2 catalytic subunit TERM 2481 2095323 - 2095303 - f 85 -12.6 -3.53811 | TCGATCGGTTGCAAA TGCTCGGG ACAGG CCCGAGCA TGACGTGGAGAGGTT Atu2129 2095377 - 2096141 + | hypothetical protein TERM 2482 2096326 - 2096301 - T 100 -16.1 -5.15634 | TATCCCATCAAAAAA GGCCGGGCCGC TTCC ACGACCCGGCC TTCCCATAGATCAAA TERM 2483 2096362 - 2096342 - T 73 -8.9 -3.88498 | TTCCCATAGATCAAA CCGTCGCTC AGA GAGCGGCAG TTACGATAAACTCAA Atu2130 2096690 - 2096349 - | hypothetical protein Atu2131 2097076 - 2096738 - | hypothetical protein TERM 2484 2097214 - 2097189 - R 71 -6 -4.22652 | opp_overlap 2097195 2097210 TCAGAGGATGGAAAA GCGCAGGCCG AAGGAA CGGCTTTCGC CCGGTTGGAGAATAT Atu2132 2098007 - 2097174 - | hypothetical protein Atu2133 2098161 - 2099543 + | hypothetical protein TERM 2485 2099596 - 2099563 - T 100 -16.8 -5.80364 | opp_overlap 2099567, overlap 2099567 ACGGCAAGAAAAAAA GAAAGCCCGGCGGA TTATGG TCCGCCGGGCTTTT TCATTTGTGGGGCTT TERM 2486 2099592 - 2099567 - T 100 -17.6 -5.33131 | opp_overlap 2099567, overlap 2099563 CAAGAAAAAAAGAAA GCCCGGCGGA TTATGG TCCGCCGGGC TTTTTCATTTGTGGG TERM 2487 2099567 - 2099592 + T 100 -18.3 -5.04601 | opp_overlap 2099563 2099567 CAAGAAAAAAAGAAA GCCCGGCGGAT TATG GTCCGCCGGGC TTTTTCATTTGTGGG Atu2134 2100819 - 2099611 - | MFS permease TERM 2488 2100727 - 2100714 - G 71 -5.3 -4.30719 | overlap 2100716 GCTGGCCATAATAAA GATTG GCTG CAATC AGCCCGCAGGCTGTT Atu2135 2101564 - 2100863 - | TetR family transcriptional regulator parA 2102372 - 2101656 - | chromosome partitioning protein TERM 2489 2102497 - 2102518 + r 79 -11.5 -3.6849 | opp_overlap 2102497 GCCGCGCAACAAAAA GCCCGCGAT TTGT AACGCGGGC TTCTTCCAGTTCAGT TERM 2490 2102518 - 2102497 - R 100 -11.5 -5.06414 | opp_overlap 2102497 GCCGCGCAACAAAAA GCCCGCGAT TTGT AACGCGGGC TTCTTCCAGTTCAGT Atu2137 2102917 - 2102537 - | hypothetical protein TERM 2491 2102774 - 2102739 - G 70 -3.9 -4.58395 | overlap 2102741 CGCATCTCGCAAAAA TAGCGGTCGGAACCT TTAGAC AGGTTCCAGCCTCGA ATTCCCGCTTTGTTG TERM 2492 2102911 - 2102899 - G 84 -3.3 -5.1675 | TCAGTGACGAAAAAA GTGAG AAT CTCGC GGTCACTCTGTCTAC Atu2138 2104075 - 2102930 - | dehydrogenase TERM 2493 2103132 - 2103117 - G 75 -2.4 -4.88067 | ACGTAGTCATAAAAA CCGTCA AAAC CGCCGG AAATGCCGAGATAGG Atu2139 2105460 - 2104072 - | aldehyde dehydrogenase TERM 2494 2104960 - 2104995 + g 71 -9.7 -3.72695 | gap 1, opp_overlap 2104951 2104980 GACAAAGGCCCGCAC CATGCGCTCGCCGACG AGAAG CGTCTGCGC-CGCATG TTTGATGACAACCGT Atu2140 2105744 - 2105478 - | hypothetical protein Atu2141 2106309 - 2105887 - | hypothetical protein TERM 2495 2106126 - 2106085 - G 71 -7.9 -4.07568 | overlap 2106111 GTTGTTTTCCGAAAA GCCGGCAACTCCGCCCC GACGATGA AGAGCGACGTCGCCGAC CGGAATCTCGAGATA glnA 2107742 - 2106378 - | glutamine synthetase TERM 2496 2107770 - 2107794 + r 100 -14.2 -4.87803 | opp_overlap 2107771, overlap 2107771 CTTGATTGCGCAGAC AGGGCGGCCG GGAAA CGGCCGCCCG TTTTATTTGAGCGTC TERM 2497 2107793 - 2107771 - R 95 -17.7 -2.87931 | opp_overlap 2107770 2107771 TTGATTGCGCAGACA GGGCGGCCG GGAAA CGGCCGCCC GTTTTATTTGAGCGT TERM 2498 2107771 - 2107793 + r 100 -17.7 -3.51958 | opp_overlap 2107771, overlap 2107770 TTGATTGCGCAGACA GGGCGGCCG GGAAA CGGCCGCCC GTTTTATTTGAGCGT TERM 2499 2107818 - 2107844 + r 70 -9.5 -3.40403 | gap 2, overlap 2107823 GAGCGTCAGGCCTTT GCAGCCGCTGCCG CAA CGGCAGC--CTGC TTGTGCTCCAGCGCG Atu2143 2109322 - 2107808 - | ABC transporter, membrane spanning protein (amino acid) TERM 2500 2108702 - 2108678 - G 71 -9.2 -3.71321 | ACCAAAGGGGAAGAA GGAGCCGCCG CCTTC CGGCAGTTCC ACAGCCTTGCCGTCC TERM 2501 2109042 - 2109012 - G 80 -11.9 -3.72695 | overlap 2108998 2109013 AGTCCGGTGACGAAA CCGCCC-CACGGGCC CAT GGC-CGTGCGGGCGA AGGAATAGGCCGCGC TERM 2502 2109041 - 2109013 - G 73 -13.2 -2.83403 | overlap 2108998 2109012 GTCCGGTGACGAAAC CGCCC-CACGGGCC CAT GGC-CGTGCGGGCG AAGGAATAGGCCGCG TERM 2503 2109249 - 2109262 + g 70 -3.1 -4.59773 | gap 1, opp_overlap 2109238 2109249, overlap 2109249 CATACCCCCGCATAA CG-GGA AAG TCCGCG TTTTTCGAAATAGGA TERM 2504 2109380 - 2109352 - R 83 -6 -4.98468 | gap 1, opp_overlap 2109357, overlap 2109354 ATAAGAAAAAAACAA GC-CAGTCAGCCA TTAT TGGCCGATTGTGC CCCAGTTTTCAGCGT Atu2144 2110319 - 2109546 - | hypothetical protein TERM 2505 2110386 - 2110404 + H 70 -3.2 -4.77629 | overlap 2110388 TCACATTATCGCGAG TGTCAAAT GGA ATTTGAAA TTTTCTCTTCATTTT TERM 2506 2110656 - 2110635 - g 95 -13.7 -4.10161 | opp_overlap 2110626 CACCATCGCCGAAAA CGCCGGCGT TTCG ACGCCGACG GTGGCGCGCATGGTG TERM 2507 2111001 - 2110988 - g 74 -3.8 -4.7373 | overlap 2110989 TGATTCGACCAAAAA CGAC GCTGAT GTCG TCCAATTCCAGCGCC Atu2145 2110492 - 2111370 + | RpiR family transcriptional regulator Atu2146 2111598 - 2111389 - | hypothetical protein TERM 2508 2111672 - 2111661 - H 90 -4.4 -5.36965 | GAAGAGGAGAAAAAA GTGA TCTC TCAC TGCCGCCGACTGCTT Atu2147 2111661 - 2112767 + | ABC transporter, substrate binding protein TERM 2509 2112809 - 2112779 - f 91 -11.8 -4.12942 | opp_overlap 2112780 2112806, overlap 2112780 GTAAACTGCTGAAAA CGCACCCCGGCC GATCCAA AGCCGGGGTGCT TCTTTAAAAGCATTT TERM 2510 2112808 - 2112780 - f 91 -15.3 -3.07283 | opp_overlap 2112780 2112806, overlap 2112779 TAAACTGCTGAAAAC GCACCCCGGCC GATCCAA AGCCGGGGTGC TTCTTTAAAAGCATT TERM 2511 2112780 - 2112808 + F 100 -14.6 -3.91488 | opp_overlap 2112779 2112780, overlap 2112806 TAAACTGCTGAAAAC GCACCCCGGC CGATCCAAA GCCGGGGTGC TTCTTTAAAAGCATT Atu2148 2112971 - 2113855 + | ABC transporter, membrane spanning protein Atu2149 2113852 - 2114634 + | ABC transporter, membrane spanning protein Atu2150 2114648 - 2115706 + | ABC transporter, nucleotide binding/ATPase protein adh 2115801 - 2116844 + | alcohol dehydrogenase TERM 2512 2116948 - 2116894 - T 70 -7.1 -4.07568 | gap 4 GTCCTGCGCCCAAAA GCCCGG-GCCGTGCCGCCTGTCGGGGG TGAGG CCTCC-ACCGGCGGG--GGCGCCGGGC TGGCGGCAACGGAAT Atu2152 2117513 - 2116872 - | hypothetical protein TERM 2513 2117139 - 2117127 - G 85 -3.3 -5.32882 | GACGACCAGAAAAAA GCCGA CCA CCAGC ACGATGAAAAAAATA Atu2153 2117846 - 2118622 + | ABC transporter, nucleotide binding/ATPase protein TERM 2514 2119753 - 2119774 + G 75 -13.7 -2.96216 | GATGGGCCTTTCGGT GGGCATGGC CGGC GCCGTGCCC TATGTCATGGTGCGG tphA 2118701 - 2120032 + | MFS permease TERM 2515 2120074 - 2120056 - T 100 -13.8 -5.9362 | opp_overlap 2120056 GAAAACACAAAAAAA GCGCGGGC AAG ACCCGCGC TTTTTTATTTGTCCC TERM 2516 2120056 - 2120074 + T 100 -13.1 -5.72622 | opp_overlap 2120056 GAAAACACAAAAAAA GCGCGGG CAAGA CCCGCGC TTTTTTATTTGTCCC TERM 2517 2120086 - 2120122 + T 83 -8 -4.4648 | gap 1, overlap 2120089 GCGCTTTTTTATTTG TC-CCGGCGATGCGTGA AACA TCACGCAGCGCTGTCGA TTTTCTCCTCGCCGT TERM 2518 2120089 - 2120118 + T 83 -14.3 -2.81535 | overlap 2120086 CTTTTTTATTTGTCC CGGCGATGCGTGA AACA TCACGCAGCGCTG TCGATTTTCTCCTCG metH 2123879 - 2120106 - | B12-dependent methionine synthase TERM 2519 2120837 - 2120850 + g 74 -6.7 -4.28994 | opp_overlap 2120824 2120823 AGCCGATCACCGCGC GTGGT CGGA ACCAC TTTTCCTCGATGATC TERM 2520 2123519 - 2123462 - G 75 -13.4 -2.8372 | gap 3, overlap 2123461 CACCGGCCACGAAAC GGCGGCGGCCATCCTCGCGCTCGGCGCGC TGA GC-CGCCCGGCGC-ACGATCGCCGC-GCC CTCGCGGTTGAGATC TERM 2521 2124574 - 2124557 - g 93 -8.3 -5.06414 | overlap 2124559 TTCTGGGAAGAAAAA CACGGCG CCAT CGCCGAG GAATTCAATCGCGAC TERM 2522 2124572 - 2124559 - g 79 -9.5 -4.16307 | overlap 2124557 CTGGGAAGAAAAACA CGGCG CCAT CGCCG AGGAATTCAATCGCG Atu2156 2124071 - 2125318 + | hypothetical protein TERM 2523 2125378 - 2125398 + T 76 -12.6 -2.82015 | opp_overlap 2125339, overlap 2125340 ACTTCTCTGCCGTCA TGCTCGGG CTTGT CCCGAGCA TCTGCTACCTATCCA Atu2157 2126070 - 2125510 - | tyrosine/serine protein phosphatase TERM 2524 2126111 - 2126072 - R 83 -10 -4.14193 | gap 1 AGAACACTATACAAA CCATCAGCCCGTCACATTC ATC GGATG-GACGGGGAGATGG CATCGCAAATGGACG Atu2158 2126724 - 2126272 - | hypothetical protein TERM 2525 2126785 - 2126819 + H 72 -12.1 -2.85351 | gap 1, opp_overlap 2126794 CCCATGCCCTTCCTG CCGCAACGACCAC-CC TCGT GGCGTGGGCGTGGCGG TATCGTCTCGACAGC TERM 2526 2127437 - 2127458 + G 72 -10.9 -3.35679 | opp_overlap 2127429, overlap 2127429 ACAATAACATGGTCC TCGGCATCG AGGG CGATGTCGA TTATAACTGGAACGA omp 2127166 - 2127795 + | outer membrane protein TERM 2527 2127821 - 2127839 + F 100 -13.1 -5.24129 | opp_overlap 2127821 TAAGTTCAGTAAAAA GCCCGGC CATCC GCCGGGC TTTTTTGTGGGAAGC TERM 2528 2127839 - 2127821 - f 100 -13.1 -4.74801 | opp_overlap 2127821 TAAGTTCAGTAAAAA GCCCGGC CATCC GCCGGGC TTTTTTGTGGGAAGC TERM 2529 2128023 - 2128048 + G 74 -11.9 -3.42395 | gap 1, opp_overlap 2128023 2128022, overlap 2128021 2128024 AATTCTTTCCACAAT TGCTGCC-CTGG TCG CCAGCGGCAGCG TCTTTGCGTCCTACG TERM 2530 2128024 - 2128047 + G 72 -13.2 -2.65116 | gap 1, opp_overlap 2128023 2128022, overlap 2128023 2128021 ATTCTTTCCACAATT GCTGCC-CTGG TCG CCAGCGGCAGC GTCTTTGCGTCCTAC Atu2160 2127859 - 2128362 + | hypothetical protein TERM 2531 2129026 - 2129000 - g 70 -10.8 -3.55622 | CTGAAGGCGCTGAAA GAGGCCGCCATC GAA GACCGCGACCTC CAGACGAGCAATTTT pp26 2128745 - 2129488 + | periplasmic immunogenic protein TERM 2532 2129489 - 2129527 + T 78 -11.7 -3.17392 | gap 1, opp_overlap 2129489 GCGCTCGACCAGTAA GATCGACGGCGGCGGCAC CCTG GTGCCGCC-CTGGCCATC TTCACTTCCGCCATA TERM 2533 2129557 - 2129589 + T 100 -13.4 -5.29782 | opp_overlap 2129557 AGGCATAAAAAGAAA TGCCCCTCACTGCC ATTCC GGAAGCGAGGGGCA TTTTTTATCGATCTG TERM 2534 2129589 - 2129557 - T 100 -16.3 -4.97405 | opp_overlap 2129557 AGGCATAAAAAGAAA TGCCCCTCACTGCCA TTC CGGAAGCGAGGGGCA TTTTTTATCGATCTG Atu2163 2129980 - 2129645 - | hypothetical protein Atu2164 2130554 - 2130132 - | hypothetical protein Atu2165 2130798 - 2133350 + | bacteriophytochrome protein Atu2166 2134382 - 2133420 - | hypothetical protein TERM 2535 2133846 - 2133868 + g 74 -6.9 -4.3255 | overlap 2133827 CGGCTTGGCCTGCGG CACCGGTGG CTGCT CCGGCGGTG TTTCTTCCTTCACGG TERM 2536 2134157 - 2134202 + g 78 -4.5 -4.74611 | gap 1, overlap 2134165 2134166 GTGGCGGCGGAGGTT GCGGTTTCTCCGCC-TTGGCCG CCG CAGCCGGCGGCGGGGCAGCTTC TTCTTTTTTCTCCTC TERM 2537 2134165 - 2134199 + g 79 -7.7 -4.44307 | gap 1, overlap 2134157 2134166 GGAGGTTGCGGTTTC TCCGCCTTGGCCGCCG CAGC CGGCGGC-GGGGCAGC TTCTTCTTTTTTCTC TERM 2538 2134484 - 2134507 + r 70 -9.5 -3.36823 | opp_overlap 2134484 GCGGGAAACAAAAAA CCCGGCCAG CGCTCA CTGACCGGG TTCAATTTTGAAGGA TERM 2539 2134507 - 2134484 - R 100 -12.4 -5.63517 | opp_overlap 2134484 GCGGGAAACAAAAAA CCCGGCCAGC GCTC ACTGACCGGG TTCAATTTTGAAGGA rpoD 2136587 - 2134533 - | RNA polymerase sigma factor RpoD dnaG 2138965 - 2136980 - | DNA primase TERM 2540 2138300 - 2138320 + g 70 -4.5 -4.56597 | overlap 2138302 2138304 ATCCGCCGCCATGGC GCGGCCGCC AAA GGCGATCAC TTTTTCCCGCGACGA TERM 2541 2139088 - 2139068 - R 75 -6 -4.64844 | opp_overlap 2139070 2139082, overlap 2139070 2139072 GCCACAGAGATAAAA CCGACGCC GCCTT GGCGCCTG CTTCCGGCGAATTTA TERM 2542 2139296 - 2139331 + r 100 -14.8 -4.58395 | opp_overlap 2139301, overlap 2139301 ATCTTCGTCGGCAGA AAAAAGGCAGGGTAGC CATG GCTACCCTGCCTTTAC TTTTTCAGAAGTGAC TERM 2543 2139301 - 2139326 + r 100 -19.1 -4.32046 | opp_overlap 2139301, overlap 2139296 CGTCGGCAGAAAAAA GGCAGGGTAGC CATG GCTACCCTGCC TTTACTTTTTCAGAA TERM 2544 2139326 - 2139301 - R 100 -19.1 -5.24129 | opp_overlap 2139296 2139301 CGTCGGCAGAAAAAA GGCAGGGTAGC CATG GCTACCCTGCC TTTACTTTTTCAGAA Atu2169 2139804 - 2139352 - | hypothetical protein carA 2140140 - 2141345 + | carbamoyl phosphate synthase small subunit TERM 2545 2141400 - 2141372 - f 90 -12.4 -3.95071 | gap 1, opp_overlap 2141397 GAAATCGTGAAAGAA CCG-CCGCCGCTC CCGA GAGCTGCGGTCGG ACAACTGATTGTAAT TERM 2546 2142780 - 2142755 - g 85 -6.1 -5.02476 | overlap 2142758 ACAGCGTCGAAAAAA CAACGGCCGAT TTTC ATCGACTGCTG CAAGCCGTCGACAAC TERM 2547 2142801 - 2142758 - g 76 -5.9 -4.61482 | overlap 2142755 2142795 2142797 2142798 GCGTCGAAAAAACAA CGGCCGATTTTCATCGACT GCTGCA AGCCGTCGACAACAGGCCG TTTTCAACAACCGGC Atu2171 2141878 - 2143392 + | hydrolase TERM 2548 2143453 - 2143473 + T 100 -18.3 -4.55128 | CGGATGACCACCCGA CGGCCCGCT TTT AGCGGGCCG TTTTCATTTCGCGCT Atu2172 2144860 - 2143463 - | multidrug efflux protein TERM 2549 2144408 - 2144398 - G 85 -2.4 -5.39721 | overlap 2144377 GCAGCACATAAAAAA GCAG CGC CGGC AGGAGGCCGAACTTG TERM 2550 2145254 - 2145265 + G 74 -5.8 -4.43681 | overlap 2145226 2145249 TCTCTTGTCGTTGCA GCCT TTGC AGGC TTTTCCTATTACATC TERM 2551 2146845 - 2146869 + G 79 -9.1 -4.15565 | CCGGTGTCGAAGCCG CCCGCGCCGGT GAG GCCGGCAAGGG TTTTGCCGTCGTCGC TERM 2552 2147228 - 2147263 + G 84 -17.6 -2.79302 | gap 1 GAGTTGCTTGCACAG TTCCAGCTCGCCGCCGC CAC GCGGCGGCAGGC-GGAA TATGGTCGGGCTGCT mcpA 2145191 - 2147281 + | methyl-accepting chemotaxis protein TERM 2553 2147469 - 2147488 + F 100 -13.6 -5.06414 | CTCTCACCAATCTCA TGGCCGGA GCAA TCCGGCCA TTTTTCTTCGCCACC Atu2174 2147577 - 2148056 + | hypothetical protein TERM 2554 2148054 - 2148093 + T 86 -14.6 -2.91735 | gap 1, opp_overlap 2148065, overlap 2148058 2148065 GCGCTCTTGATGAGC TGA-ATGAAAAAGGGGGCT GAA AGCCCCCTTTTTCATCTGA TCTCTCAGATATTCG TERM 2555 2148058 - 2148088 + T 100 -21.4 -2.89177 | opp_overlap 2148065, overlap 2148054 2148065 TCTTGATGAGCTGAA TGAAAAAGGGGGCT GAA AGCCCCCTTTTTCA TCTGATCTCTCAGAT TERM 2556 2148081 - 2148065 - T 100 -13.7 -4.87291 | opp_overlap 2148058 2148054 2148065 GAGCTGAATGAAAAA GGGGGCT GAA AGCCCCC TTTTTCATCTGATCT TERM 2557 2148065 - 2148081 + T 100 -13.7 -4.83269 | opp_overlap 2148065, overlap 2148058 2148054 GAGCTGAATGAAAAA GGGGGCT GAA AGCCCCC TTTTTCATCTGATCT Atu2175 2149015 - 2148098 - | hypothetical protein Atu2176 2149602 - 2149114 - | hypothetical protein Atu2177 2149881 - 2150516 + | hypothetical protein TERM 2558 2150606 - 2150639 + F 74 -10.4 -3.53012 | gap 2 AACTTTGAATTGCGC GCACCGGCC--GGTGA TCCG TCACCCTGGCTGGTGC TTTGCGCAACCAAAA TERM 2559 2151292 - 2151329 + G 72 -11.1 -3.31501 | CCACGCCATGGCCAT TGCCGCGCAGGCCATCG ACGT CGTCGGCCTGCCCGCCA TTATCCGCCCTTCCT TERM 2560 2151550 - 2151538 - g 75 -7.7 -4.18018 | overlap 2151541 CTGCTCCATCGAAAA CATCG ACC CGATG GGCGTGCACACCGGC carB 2150672 - 2154160 + | carbamoyl phosphate synthase large subunit TERM 2561 2154228 - 2154193 - f 100 -12.6 -4.30441 | gap 1, opp_overlap 2154193 2154198 CCACAAGATTGAAAA CAAGACGCCGCGGGTCA CCA TG-CCTGCGGCGTTTTG TTTTGCGCAATCCCG TERM 2562 2154193 - 2154228 + F 100 -17 -4.09685 | gap 1, opp_overlap 2154193, overlap 2154198 CCACAAGATTGAAAA CAAGACGCCGCGGGTCA CCA TG-CCTGCGGCGTTTTG TTTTGCGCAATCCCG TERM 2563 2154198 - 2154223 + F 100 -13.3 -5.07652 | gap 1, opp_overlap 2154193, overlap 2154193 AGATTGAAAACAAGA CGCCGCGGGTCA CCA TG-CCTGCGGCG TTTTGTTTTGCGCAA Atu8025 2154370 - 2154558 + | hypothetical protein Atu2179 2155744 - 2154605 - | GGDEF family protein TERM 2564 2155373 - 2155363 - G 72 -2.4 -4.76041 | CACAGCCATTAAAAA GCGC CGC GCGA AACGTATTGTTGCCG TERM 2565 2155834 - 2155814 - R 80 -4.8 -5.08088 | AATTTTCAATAAAAA TTACAGAT AAACA ACCTGTAA AAAGTATTATTGAGA Atu2180 2157342 - 2155897 - | hypothetical protein TERM 2566 2156226 - 2156251 + g 70 -3.9 -4.62069 | overlap 2156225 TCTCATATTTGAAGT GCTTGACGGCA TTGG TGACGTAGAGC TTTTTGCGCTCGGCA TERM 2567 2156923 - 2156943 + g 72 -11.1 -3.33696 | opp_overlap 2156908, overlap 2156924 CCGCCGACGCCCGCC CTGCCCCTG CGG CAGGGGCAC TTCCTTGAAACGAAC TERM 2568 2156924 - 2156942 + g 76 -14.6 -2.60075 | opp_overlap 2156908, overlap 2156923 CGCCGACGCCCGCCC TGCCCCTG CGG CAGGGGCA CTTCCTTGAAACGAA Atu2181 2158574 - 2157342 - | hypothetical protein TERM 2569 2157915 - 2157936 + g 85 -2.2 -5.32882 | gap 1, overlap 2157919 CTGCGTGCTCTGGCC GGCC-GGCG CAAAA CGTCTGGTC TTTTTTGTCCTGATG TERM 2570 2158714 - 2158749 + H 86 -6.9 -5.03994 | gap 1, overlap 2158716 2158719 CTCAGTTCTGATTTT GGCAT-GGTTCCGGAG TTCCT CTCCGGAACCTGTTTC TTTTTGTGTCTGCAA TERM 2571 2158716 - 2158745 + H 100 -13 -5.02777 | gap 1, overlap 2158714 2158719 CAGTTCTGATTTTGG CATGGTTCCGGAG TTCCT CTCCGGAACC-TG TTTCTTTTTGTGTCT TERM 2572 2158719 - 2158743 + H 100 -15.8 -4.10863 | overlap 2158716 2158714 TTCTGATTTTGGCAT GGTTCCGGAG TTCCT CTCCGGAACC TGTTTCTTTTTGTGT greA 2158796 - 2159272 + | transcription elongation factor GreA TERM 2573 2159496 - 2159457 - g 81 -13.4 -3.28924 | CATTCCGGTGCAGAA CCGGCTGGGGCAGAAGGT GGGC ACCATCGGCCCCGGCCTG CCGCCGCATCTGCCG lpcC 2159353 - 2160408 + | lipopolysaccharide core biosynthesis mannosyltransferase lrp 2161029 - 2160439 - | AsnC family transcriptional regulator TERM 2574 2161160 - 2161150 - H 82 -5.4 -5.00616 | CCGCTGCTGAAAAAA GGAA TAT TTCC ATGTCTGCCCGCCAC TERM 2575 2161573 - 2161583 + G 81 -4.6 -4.96848 | TCTCCGCCTGCGCCA CCTG CGA CGGG TTTTTCTATCGCAAC TERM 2576 2161870 - 2161884 + G 78 -4.2 -4.84359 | opp_overlap 2161853, overlap 2161853 GTGCGATCAGCGATA CGCC CATTGAT GGCG TTTTTGTCGCCATCG trxB 2161161 - 2162135 + | thioredoxin reductase TERM 2577 2163018 - 2162993 - g 74 -4 -4.82667 | gap 1 CGACGAGATGAAAAA CGCTGCAAAGC TGAAG GCTTTCC-GCG ACTTCATCGTCGCCA Atu2186 2162154 - 2163056 + | LysR family transcriptional regulator TERM 2578 2163142 - 2163121 - f 77 -11.5 -3.48474 | opp_overlap 2163124, overlap 2163124 TAAAGGTAGAAGCAA GAGGGGCGC GCAG GCGCCCTTC TTCAGCTTTGCACAT TERM 2579 2163139 - 2163124 - f 72 -11.8 -2.57541 | opp_overlap 2163124, overlap 2163121 AGGTAGAAGCAAGAG GGGCGC GCAG GCGCCC TTCTTCAGCTTTGCA TERM 2580 2163124 - 2163139 + F 83 -11.8 -3.70919 | opp_overlap 2163124 2163121 AGGTAGAAGCAAGAG GGGCGC GCAG GCGCCC TTCTTCAGCTTTGCA TERM 2581 2163335 - 2163363 + F 100 -7.4 -5.40072 | gap 1, opp_overlap 2163337, overlap 2163337 TGACCTTCACACTTA AAGGGCC-CTGGA TCTA TCCGGCGGCCCTC TTTTTTTACCCGCAA TERM 2582 2163337 - 2163361 + F 86 -10 -4.34482 | gap 1, opp_overlap 2163337, overlap 2163335 ACCTTCACACTTAAA GGGCC-CTGGA TCTA TCCGGCGGCCC TCTTTTTTTACCCGC TERM 2583 2163520 - 2163548 + F 82 -5.2 -5.00616 | gap 1, overlap 2163523 TGACCTTCAAACTTG TCAGGCCGC-GGA GCAA TCCAGCGGCCTTC TTTTTTGGAGCCGCC TERM 2584 2163523 - 2163545 + F 95 -11.3 -4.61482 | gap 1, overlap 2163520 CCTTCAAACTTGTCA GGCCGC-GGA GCAA TCCAGCGGCC TTCTTTTTTGGAGCC Atu2187 2163657 - 2163947 + | ArsR family transcriptional regulator TERM 2585 2164037 - 2164023 - f 95 -8.5 -4.87389 | overlap 2163992 CACCCGAAAAACAAA GCGCG CCTGC CGCGC AATTACGCCAACCGA Atu2188 2164070 - 2165182 + | oxidoreductase TERM 2586 2165220 - 2165193 - T 100 -14.8 -3.89215 | opp_overlap 2165193 2165194, overlap 2165194 GCTGATAAACTGAAA CGCCGCACCGCC CTTT GGCTGTGCGGCA TTTTTCTTTCAGCGC TERM 2587 2165193 - 2165220 + T 100 -12.6 -5.27335 | opp_overlap 2165193 2165194, overlap 2165194 GCTGATAAACTGAAA CGCCGCACCGCC CTTT GGCTGTGCGGCA TTTTTCTTTCAGCGC TERM 2588 2165219 - 2165194 - T 87 -16.1 -2.93047 | opp_overlap 2165193 2165194, overlap 2165193 CTGATAAACTGAAAC GCCGCACCGCC CTTT GGCTGTGCGGC ATTTTTCTTTCAGCG TERM 2589 2165194 - 2165219 + T 100 -16.1 -3.75678 | opp_overlap 2165194 2165193, overlap 2165193 CTGATAAACTGAAAC GCCGCACCGCC CTTT GGCTGTGCGGC ATTTTTCTTTCAGCG Atu2189 2165618 - 2165229 - | hypothetical protein Atu2190 2166655 - 2165618 - | hypothetical protein TERM 2590 2166157 - 2166143 - G 74 -5.6 -4.56775 | overlap 2166145 ATCCGGCCCGAAAAA GTCCCC GGC GCGGAC GATCAGCACCGGTAC Atu2191 2166746 - 2167690 + | LysR family transcriptional regulator Atu2192 2167994 - 2167806 - | hypothetical protein Atu2193 2168257 - 2167991 - | hypothetical protein Atu2194 2168286 - 2168471 + | hypothetical protein chaA 2168453 - 2169559 + | Ca2+/H+ antiporter TERM 2591 2169593 - 2169574 - T 100 -15 -5.38497 | opp_overlap 2169574 ACCGAAACGAAAAAA GCCCGGCA TCGC TGCCGGGC TTCTTTATACAATAT TERM 2592 2169574 - 2169593 + T 100 -15 -4.08279 | opp_overlap 2169574 ACCGAAACGAAAAAA GCCCGGCA TCGC TGCCGGGC TTCTTTATACAATAT aatA 2170821 - 2169619 - | aspartate aminotransferase TERM 2593 2170334 - 2170345 + g 71 -7.2 -4.17023 | AACCACTTGGTCTTC GGCG TGAT CGCC TTTTCCAGTGCTTCC Atu2197 2171033 - 2171959 + | hypothetical protein TERM 2594 2172176 - 2172186 + G 91 -8.2 -4.81814 | TTTTCCCTCTGGATG GCCG TTG CGGC TTTTCTTGTCATCGT Atu2198 2172107 - 2172418 + | hypothetical protein Atu2199 2172574 - 2173476 + | permease TERM 2595 2173556 - 2173533 - f 70 -6.6 -4.08216 | GTAGTGCGTTCAAAA TTTTGCCGGG AAAG CCCGGCGCAA ACGACAATTATTTCA Atu8026 2173535 - 2173654 + | hypothetical protein cspA 2173922 - 2174137 + | cold shock protein TERM 2596 2174168 - 2174185 + T 100 -12.7 -5.60993 | CTTTTCTAGTTGAAG CCCGGCA GGAA TGCCGGG TTTTTTTATGCGCCC Atu2201 2174866 - 2174222 - | hydrolase TERM 2597 2174428 - 2174399 - G 71 -7.8 -4.11692 | opp_overlap 2174392 CACCGATCCCGAAAA CAGCACGTCGCC GACATG GGCGAAGTTCTG GTCGCGGTTGTAATA TERM 2598 2174515 - 2174489 - G 73 -10.8 -3.65693 | opp_overlap 2174494 2174503, overlap 2174480 2174482 ATGATAGACCTCAAA GACGTGGTCTCC GAA GGAGACCTTGTC ACCATCCTTCAACCA TERM 2599 2174494 - 2174510 + g 76 -12.3 -3.32268 | opp_overlap 2174480 2174482 2174489, overlap 2174503 AGACCTCAAAGACGT GGTCTCC GAA GGAGACC TTGTCACCATCCTTC Atu2203 2175098 - 2175697 + | hypothetical protein TERM 2600 2175752 - 2175719 - g 100 -8.9 -5.32882 | gap 1, opp_overlap 2175726, overlap 2175720 2175723 2175726 2175728 CATCACGACAAAAAA TGAAGGAGAGCGCGGA GTT TCCGCGCTCTT-TTCT ATTTCCGGTAAAGGC TERM 2601 2175751 - 2175720 - g 85 -12.4 -3.78644 | gap 1, opp_overlap 2175726, overlap 2175719 2175723 2175726 2175728 ATCACGACAAAAAAT GAAGGAGAGCGCGGA GTT TCCGCGCTCTT-TTC TATTTCCGGTAAAGG TERM 2602 2175749 - 2175723 - g 80 -10.8 -4.0014 | opp_overlap 2175726, overlap 2175720 2175719 2175726 2175728 ACGACAAAAAATGAA GGAGAGCGCGGA GTT TCCGCGCTCTTT TCTATTTCCGGTAAA TERM 2603 2175726 - 2175746 + G 100 -16.9 -4.79451 | opp_overlap 2175723 2175720 2175719 2175726 2175728 ACAAAAAATGAAGGA GAGCGCGGA GTT TCCGCGCTC TTTTCTATTTCCGGT TERM 2604 2175746 - 2175726 - g 87 -16.9 -3.02564 | opp_overlap 2175726, overlap 2175723 2175720 2175719 2175728 ACAAAAAATGAAGGA GAGCGCGGA GTT TCCGCGCTC TTTTCTATTTCCGGT TERM 2605 2175744 - 2175728 - g 76 -13.7 -3.04294 | opp_overlap 2175726, overlap 2175726 2175723 2175720 2175719 AAAAAATGAAGGAGA GCGCGGA GTT TCCGCGC TCTTTTCTATTTCCG Atu2204 2175718 - 2175906 + | hypothetical protein petP 2175938 - 2176435 + | MarR family transcriptional regulator petR 2176438 - 2177151 + | two component response regulator TERM 2606 2177244 - 2177218 - g 78 -6.4 -4.61231 | overlap 2177237 CGACACGTTCAAAAA GAGCCCCGTGGC CAA GGCATGGCGCTC CGCCGGCAGATGGCT envZ 2177183 - 2178562 + | two component sensor kinase csaA 2178917 - 2178576 - | secretion chaperone proC 2179747 - 2178929 - | pyrroline-5-carboxylate reductase Atu8172 2180250 - 2179750 - | hypothetical protein TERM 2607 2180654 - 2180626 - R 100 -13.2 -5.08255 | gap 1 ACCCCGAAAACAAAA GACCCCGGAATCG CAGG CGAT-CCGGGGCC TCTCAAAAAAATGCT Atu8173 2180940 - 2180677 - | hypothetical protein lgt 2181220 - 2182062 + | prolipoprotein diacylglyceryl transferase TERM 2608 2182096 - 2182055 - f 90 -10.3 -4.26076 | gap 2, overlap 2182056 GCAGCGCGACGAAAA GCGCCTGAGCGGTATGATC GCCCAT GACCACACCGCTC-G-CGC AACGTATCAAATCCC TERM 2609 2182964 - 2182982 + G 87 -10.2 -4.37092 | overlap 2182965 GCGTGCATGTCAACG GCGCCCTG AGG CAGGGCGA TTTTCTCCACGGCCT TERM 2610 2182965 - 2182981 + G 78 -13.7 -3.21934 | overlap 2182964 CGTGCATGTCAACGG CGCCCTG AGG CAGGGCG ATTTTCTCCACGGCC Atu2214 2182078 - 2183178 + | hypothetical protein Atu2215 2183329 - 2184123 + | hypothetical protein Atu2216 2184125 - 2185276 + | Xaa-Pro dipeptidase TERM 2611 2185346 - 2185307 - f 74 -7.8 -4.13728 | gap 1, opp_overlap 2185296, overlap 2185298 GACAGAGCGGGAAAA CCGCCCTTACATTGCGCCA CCT TGGGGCAA-GAAGGAGCGG AACATGAGAGGGAAA TERM 2612 2185378 - 2185390 + G 84 -6.2 -5.0133 | overlap 2185378 2185378 TCGCATGAGCCGGAC GGGG TTCCC CCCC TTTTTTCCGGCCATC Atu2217 2185367 - 2186110 + | hypothetical protein TERM 2613 2186469 - 2186479 + G 75 -2.4 -4.91511 | opp_overlap 2186463 CAGCGAGAACGTGCG CGGC GAG GACG TTTTTATCGTCCAGT prsA 2186332 - 2187264 + | ribose-phosphate pyrophosphokinase TERM 2614 2187380 - 2187398 + T 75 -5.9 -4.56597 | CTCTCCTGGCGTCAT CCTCTGG CTAGT CCCGAGG TTTTTAACACGCCAA TERM 2615 2187469 - 2187483 + T 70 -10 -3.33361 | ATGACGTGGACTATC TGGCGA GCG TCGCCA TTCATCTCATTGATG TERM 2616 2187525 - 2187511 - T 71 -10 -3.60098 | ATGCCGCACTTCAAA CGTCCT CTT AGGACG AGGCCGCACCCGCGC Atu8174 2188363 - 2187518 - | hypothetical protein TERM 2617 2187930 - 2187920 - G 76 -5.4 -4.63218 | TTCGCCCGAAGAAAA CGAA CAG TTCG AATAACATTGCGTGC Atu2220 2189843 - 2188353 - | hypothetical protein TERM 2618 2189082 - 2189070 - G 84 -4.1 -5.18726 | CTGCGAGAAGAAAAA TTCCA GCG CGGAA CCGACCTTCAGCTGG Atu2221 2190123 - 2189836 - | Lipid A biosynthesis protein Atu2222 2190983 - 2190144 - | dolichol-phosphate mannosyltransferase TERM 2619 2190515 - 2190541 + g 88 -13.7 -3.65046 | gap 1 CGCGCCGGCCGACGC GCTGGC-CGGCC ACGA GGCCGAGCCGGC TTGTTGCAGTGGCGG TERM 2620 2191497 - 2191484 - g 71 -6.7 -4.18018 | CGTGCCGACGGAAAA GGATG CCAT CATCC AGGCTTTCCGCCGTG TERM 2621 2191989 - 2191977 - g 73 -10.5 -3.60098 | opp_overlap 2191977 AGCGCGGAGGGCAAA CGCCG CGC CGGCG TGCTCTCGGGCGGCG mcpA 2191182 - 2193446 + | methyl-accepting chemotaxis protein TERM 2622 2193457 - 2193489 + T 95 -12.1 -4.41494 | opp_overlap 2193462, overlap 2193462 CATAAGCCACAAGGA AAAAAGGCCGGAG ACAAAAC CTCCGGCCTTTTA TTTTGCTTAAAACTC TERM 2623 2193462 - 2193484 + T 100 -12 -5.18643 | opp_overlap 2193462, overlap 2193457 GCCACAAGGAAAAAA GGCCGGAG ACAAAAC CTCCGGCC TTTTATTTTGCTTAA TERM 2624 2193484 - 2193462 - T 100 -13.4 -5.32944 | opp_overlap 2193462 2193457 GCCACAAGGAAAAAA GGCCGGAGAC AAA ACCTCCGGCC TTTTATTTTGCTTAA TERM 2625 2193549 - 2193502 - T 95 -12.7 -4.08216 | gap 2, overlap 2193542 TTATTTTGCTTAAAA CTCCGATCCGGGCTCCCAGGGGC CGAA GCCCCTGGGAACAC-G-CCGGCG ACCTGGCACCGTTGC aldA 2195107 - 2193590 - | aldehyde dehydrogenase TERM 2626 2195147 - 2195131 - R 71 -5.8 -4.25104 | CCTCCCTGATGAAAA CGATCC TGAGC GGACCG CATGGGAGGAAGGTG acoR 2196240 - 2195281 - | transcriptional regulator Atu2226 2198429 - 2196345 - | GGDEF family protein TERM 2627 2198350 - 2198330 - G 84 -5.3 -5.00616 | overlap 2198333 GCGCTTTCGAAAAAA GACGCATCG TGA CGAAGCTTC CGAGCATGCACACGA rplY 2198732 - 2199340 + | 50S ribosomal protein L25/general stress protein Ctc TERM 2628 2199402 - 2199377 - f 86 -14.7 -2.93252 | opp_overlap 2199378, overlap 2199374 AGCTTTGAAGAATGA GGCCCGTTCCG TTTT CGGAACGGGCT TTTTAGTTTTTATGA TERM 2629 2199378 - 2199401 + F 100 -18.2 -5.2197 | opp_overlap 2199377 2199374 GCTTTGAAGAATGAG GCCCGTTCCG TTTT CGGAACGGGC TTTTTAGTTTTTATG Atu2228 2199643 - 2202030 + | GGDEF family protein TERM 2630 2202017 - 2202005 - f 80 -10.5 -3.86346 | CGACGTCCGGACAAA GCCGC TTT GCGGC GCGACAAGCGTGAAG TERM 2631 2202412 - 2202394 - g 76 -13.2 -3.05844 | GCCGCGAGGCGAATA TCGAGGCT TCC AGCCTCGA GGACGCCAGAAGATA Atu2229 2202048 - 2202761 + | ABC transporter, substrate binding protein (amino acid) pth 2202862 - 2203578 + | peptidyl-tRNA hydrolase Atu2231 2203586 - 2204038 + | acetyltransferase clpS 2204396 - 2204085 - | ATP-dependent Clp protease adaptor Atu2233 2204639 - 2205742 + | translation-associated GTPase Atu2234 2206040 - 2206513 + | hypothetical protein Atu2235 2206510 - 2206977 + | hypothetical protein apt 2207565 - 2207023 - | adenine phosphoribosyltransferase TERM 2632 2207754 - 2207731 - R 100 -19.6 -4.73388 | AACGCTCATGAAAAA GCCTCCGCGG ACGA CCGCGGAGGC TGATGATCGCAGGCA fbcC 2208666 - 2207782 - | cytochrome c1 fbcB 2209972 - 2208689 - | ubiquinol-cytochrome c reductase cytochrome b subunit TERM 2633 2209016 - 2208998 - G 71 -8.8 -3.7282 | CCAGGGCAGGAAGAA CAGCACGA TGA TCGCGCCG AACATGACGAGAACG fbcF 2210565 - 2209987 - | ubiquinol-cytochrome C reductase iron-sulfur subunit TERM 2634 2210545 - 2210513 - G 93 -7.6 -5.06016 | opp_overlap 2210513 ACTAGATAAAGAAAA TCGCGACGGGTCGG TTCAC CCGAAGCGTCGTGA TTGGTTACGTGCTCG TERM 2635 2210906 - 2210920 + G 89 -11.4 -4.25256 | overlap 2210913 CTTGCATGGTATCCA CGGCAG TGG CTGCCG TTCTTTTCATCGCCA Atu2240 2210875 - 2211807 + | hypothetical protein TERM 2636 2211840 - 2211860 + T 88 -13.9 -3.33737 | opp_overlap 2211841, overlap 2211841 CATCGCCATGCAGAA ACGGCGGCC GAA GGCCGCCGC TTATGACGCTTCGTC TERM 2637 2211841 - 2211859 + T 90 -17.4 -2.59921 | opp_overlap 2211841, overlap 2211840 ATCGCCATGCAGAAA CGGCGGCC GAA GGCCGCCG CTTATGACGCTTCGT TERM 2638 2211859 - 2211841 - T 100 -17.4 -3.92075 | opp_overlap 2211841 2211840 ATCGCCATGCAGAAA CGGCGGCC GAA GGCCGCCG CTTATGACGCTTCGT Atu2241 2213744 - 2211861 - | ABC transporter, nucleotide binding/ATPase protein TERM 2639 2212901 - 2212862 - G 72 -12.2 -3.04598 | gap 1 ACAAATCGATACAGA GCGCCGCCAT-GGAGGTGA TCA TCACGCCCGATAGCAGCGC CATGGAGGCGCGCAC TERM 2640 2213822 - 2213868 + r 74 -10.3 -3.61398 | gap 2, opp_overlap 2213828 2213833, overlap 2213830 2213833 ATTTCGGTAACGTCA GGAAAATGAAAGAGGGCGGAGAA TGT TCCCCCGCCCTC-T-CGTTTTCC TTATTCCGCAGCCAC TERM 2641 2213864 - 2213828 - R 71 -5.7 -4.28361 | opp_overlap 2213822 2213830 2213833, overlap 2213833 GTAACGTCAGGAAAA TGAAAGAGGGCGGAGAA TGT TCCCCCGCCCTCTCGTT TTCCTTATTCCGCAG TERM 2642 2213830 - 2213862 + r 75 -6.1 -4.56133 | opp_overlap 2213828 2213833, overlap 2213822 2213833 AACGTCAGGAAAATG AAAGAGGGCGGAGAA TGT TCCCCCGCCCTCTCG TTTTCCTTATTCCGC TERM 2643 2213859 - 2213833 - R 100 -16.6 -4.23781 | opp_overlap 2213830 2213822 2213833, overlap 2213828 GTCAGGAAAATGAAA GAGGGCGGAGAA TGT TCCCCCGCCCTC TCGTTTTCCTTATTC TERM 2644 2213833 - 2213859 + r 78 -12.2 -3.22061 | opp_overlap 2213833 2213828, overlap 2213830 2213822 GTCAGGAAAATGAAA GAGGGCGGAGAA TGT TCCCCCGCCCTC TCGTTTTCCTTATTC Atu2242 2215719 - 2213869 - | ABC transporter, nucleotide binding/ATPase protein TERM 2645 2215862 - 2215848 - R 79 -11.4 -3.74347 | TCGAGAAATGGGAAA CGCGGT TGA ACCGCG GGGCAACACCTAGGC Atu2243 2216974 - 2216099 - | hypothetical protein Atu2244 2217210 - 2217695 + | tRNA/rRNA methyltransferase TERM 2646 2217857 - 2217823 - f 100 -7.6 -5.18726 | GCCGGACAATAAAAA TCGCTCTCGCCGGGAC CGT GCGCCGGCGGGTGTGA GGAGACGTCGCATGC TERM 2647 2218252 - 2218238 - g 83 -4.2 -5.03715 | ATTATCCTGAAAAAA GGCAGT TCC AATGCC AGACAGGGTGGCGGA Atu2245 2217869 - 2219521 + | Na+/Pi-cotransporter Atu2246 2219856 - 2219581 - | hypothetical protein hemF 2219983 - 2220894 + | coproporphyrinogen III oxidase TERM 2648 2221244 - 2221231 - g 72 -2.3 -4.82901 | overlap 2221232 TGCCTCGTACAAAAA TCCCG GCAG CTGGA ACTTCCTCTGTTTTC Atu2248 2221017 - 2221283 + | hypothetical protein TERM 2649 2221346 - 2221372 + F 71 -12.4 -2.52464 | TCGTTTCTTGTCGGA GGGACAGCAT CACATCA ATGCTGTCCC TCACTTGAACAGGGA Atu2249 2221397 - 2221582 + | hypothetical protein TERM 2650 2221588 - 2221573 - T 76 -10.4 -3.68351 | overlap 2221551 2221574 CCGCGACGAGGCAAA TGCGGC CTGA GCCGCA AAGCAGCCCTCGCCG TERM 2651 2221604 - 2221574 - T 72 -12.4 -2.80796 | overlap 2221551 2221573 2221591 CGCGACGAGGCAAAT GCGGCCTGAGCCGC AAA GCAGCCCTCGCCGC GACTTCAATTCTCGA papS 2222865 - 2221609 - | poly(A) polymerase Atu2251 2223494 - 2222862 - | MutT family NTP pyrophosphatase TERM 2652 2222976 - 2222952 - G 91 -8.5 -4.83615 | opp_overlap 2222974, overlap 2222970 2222973 CATTTCGTAGAAAAA CCGCTCCTTCC CCT GAAAGATGCGG CTGCCGCGCCCGTGA Atu2252 2224120 - 2223491 - | hypothetical protein moxR 2224295 - 2225305 + | MoxR family protein Atu2254 2225342 - 2226256 + | hypothetical protein TERM 2653 2226314 - 2226364 + G 76 -6.6 -4.57569 | gap 1, overlap 2226305 2226313 GCTTACTGGCGTTGC CCGCCATCTGGTGGCTGCTGCGG CTAACC CCGCCGC-GCCCCAAGGCGGAGG TTTTTCCGCCGCTGA TERM 2654 2227236 - 2227252 + G 77 -7.9 -4.38927 | CGGCAATGATTTCCA GCCGCTG CTG CAGCCGC TTTATTATATCAGCC Atu8175 2226253 - 2229063 + | transmembrane protein TERM 2655 2229180 - 2229224 + G 86 -14.9 -3.28712 | overlap 2229154 GTGGCGCATGGCTGC GCGGGCTGGCGCTTGTCGC CTTGCTC GCGGCCATCGCCAACCCGC TTCTGACGCAGGAAG TERM 2656 2230832 - 2230819 - g 78 -4.5 -4.8048 | overlap 2230820 GTTCGAGATCAAAAA TGGCG ATTT CACCA CCCTCGTCCATGTCG Atu2257 2229065 - 2231149 + | hypothetical protein TERM 2657 2231160 - 2231179 + F 73 -10.6 -3.39505 | overlap 2231161 GGTAAAGGTGCTTTA ACCCGGCG GCAG CGCCGGGC TTCTCCGTCTCCGAT TERM 2658 2231161 - 2231178 + F 81 -14.1 -2.63382 | overlap 2231160 GTAAAGGTGCTTTAA CCCGGCG GCAG CGCCGGG CTTCTCCGTCTCCGA Atu2258 2231239 - 2231652 + | acetyltransferase Atu2259 2232975 - 2231662 - | MFS permease TERM 2659 2232791 - 2232781 - G 76 -5.4 -4.62302 | overlap 2232784 CAACATGCCGAAAAA GAAC GCC GTTC CGGTCTGCAGCGCCT Atu2260 2233634 - 2233065 - | acetyltransferase Atu2261 2233931 - 2234923 + | hypothetical protein Atu2262 2235432 - 2234941 - | hypothetical protein Atu2263 2235499 - 2236449 + | hypothetical protein leuA 2238368 - 2236659 - | 2-isopropylmalate synthase Atu2265 2239913 - 2238735 - | benzoate transport protein TERM 2660 2238924 - 2238909 - G 71 -8.2 -4.11216 | GGCGGAGCCGGAAAA GGCGCC GACC AGCGCC AGACCCGCCACCGCC TERM 2661 2240410 - 2240383 - g 74 -5.4 -4.57073 | opp_overlap 2240382, overlap 2240385 GATCGCGTGGAAAAA GGCCCGGCCCGT TATT ACGAGCTGGAAC TGGGCCTGACGGAAG TERM 2662 2240755 - 2240739 - g 84 -10.1 -4.18018 | CGCCGCGACGGAAAA CGCCCTG ACC CAGGACG GCCAGAAGGCAACAC TERM 2663 2240794 - 2240771 - g 72 -13.8 -2.50511 | opp_overlap 2240771 2240772, overlap 2240763 GCCAGAAGGCAACAC CGCAGGCCGG CAGC CCGGCCCGCA TTCTTGTCATCGACA TERM 2664 2240771 - 2240794 + G 71 -9.4 -3.84406 | opp_overlap 2240771 2240763, overlap 2240772 GCCAGAAGGCAACAC CGCAGGCCGG CAGC CCGGCCCGCA TTCTTGTCATCGACA TERM 2665 2240772 - 2240793 + G 70 -12.9 -2.90322 | opp_overlap 2240771 2240763, overlap 2240771 CCAGAAGGCAACACC GCAGGCCGG CAGC CCGGCCCGC ATTCTTGTCATCGAC Atu2266 2240176 - 2241258 + | hypothetical protein Atu2267 2241975 - 2241331 - | hypothetical protein sigD 2242481 - 2241972 - | ECF family RNA polymerase sigma factor TERM 2666 2242946 - 2242928 - g 81 -4.4 -4.90906 | GGACAAGATGAAAAA GGCCGACA TGA TGAAGGCC TGCGACACGATGAAA Atu8176 2242707 - 2242964 + | hypothetical protein TERM 2667 2243020 - 2243047 + T 100 -14.8 -3.89346 | opp_overlap 2243020 GCCTGAACGCAAAAA GCCCGCGCCGGT TCTC ACCGATGCGGGC TTTCTCAACTGAAAA TERM 2668 2243047 - 2243020 - T 100 -14.8 -4.74103 | opp_overlap 2243020 GCCTGAACGCAAAAA GCCCGCGCCGGT TCTC ACCGATGCGGGC TTTCTCAACTGAAAA TERM 2669 2243082 - 2243063 - T 71 -5.8 -4.27316 | gap 1, opp_overlap 2243062 TTTCTCAACTGAAAA TCGGAAACT CAG AGT-TCCGA CTGGCTTTCGACGAT clpP 2243652 - 2243071 - | ATP-dependent Clp protease proteolytic subunit TERM 2670 2243741 - 2243729 - H 91 -7.7 -5.04175 | GCAATGAGAGAAAAA GGCAA GGT TTGCC CGCCAACAATAAACA ureJ 2243887 - 2244477 + | urease accessory protein TERM 2671 2245007 - 2245033 + G 100 -12.2 -4.56597 | opp_overlap 2245005 2245004 TGGAGCCAGCAACCC GCCGCCGTCGGA CGT TCGGGTGGCGGC TTTTTGCAGGGCGCG Atu2272 2244578 - 2245324 + | hypothetical protein TERM 2672 2245389 - 2245344 - T 95 -12.5 -4.09739 | gap 1 GCAATCGCCTGAAAA GCCGGATCA-GCCGCGACCCCG ATA CGGTGCAACGCCCTGATCCGGC AGCCATACGCCTTCG Atu2273 2245814 - 2245350 - | 7-cyano-7-deazaguanine reductase TERM 2673 2245856 - 2245838 - R 80 -8.8 -4.21194 | CCTGATTATTCAAAA CCGGATCA TTG CGACCCGG ACTGTTCAAACGATG Atu2274 2246764 - 2245862 - | cation efflux system protein TERM 2674 2246807 - 2246862 + r 100 -20 -4.614 | gap 3, opp_overlap 2246814 2246818 2246822, overlap 2246816 2246817 2246818 ATTGCATGATCGATT GCCAAAACGCACGAACCGCGCGCACGG GGTGG CCGTGCGCGCGGTTCG--C-TATTGGC TTTTCTATCGTTCAA TERM 2675 2246858 - 2246814 - R 100 -17.8 -4.11692 | opp_overlap 2246807 2246816 2246817 2246818, overlap 2246818 2246822 GATCGATTGCCAAAA CGCACGAACCGCGCGCACGG GGTGG CCGTGCGCGCGGTTCGCTAT TGGCTTTTCTATCGT TERM 2676 2246816 - 2246857 + r 100 -21 -3.43774 | gap 1, opp_overlap 2246814 2246818 2246822, overlap 2246807 2246817 2246818 TCGATTGCCAAAACG CA-CGAACCGCGCGCACGG GGTGG CCGTGCGCGCGGTTCGCTA TTGGCTTTTCTATCG TERM 2677 2246817 - 2246855 + r 100 -26.1 -3.27903 | opp_overlap 2246814 2246818 2246822, overlap 2246816 2246807 2246818 CGATTGCCAAAACGC ACGAACCGCGCGCACGG GGTGG CCGTGCGCGCGGTTCGC TATTGGCTTTTCTAT TERM 2678 2246854 - 2246818 - R 100 -29.6 -2.75081 | opp_overlap 2246817 2246816 2246807 2246818, overlap 2246814 2246822 GATTGCCAAAACGCA CGAACCGCGCGCACGG GGTGG CCGTGCGCGCGGTTCG CTATTGGCTTTTCTA TERM 2679 2246818 - 2246854 + r 100 -29.6 -2.55657 | opp_overlap 2246818 2246814 2246822, overlap 2246817 2246816 2246807 GATTGCCAAAACGCA CGAACCGCGCGCACGG GGTGG CCGTGCGCGCGGTTCG CTATTGGCTTTTCTA TERM 2680 2246850 - 2246822 - R 100 -23.2 -3.27786 | opp_overlap 2246818 2246817 2246816 2246807, overlap 2246818 2246814 GCCAAAACGCACGAA CCGCGCGCACGG GGTGG CCGTGCGCGCGG TTCGCTATTGGCTTT Atu2275 2247321 - 2246920 - | hypothetical protein TERM 2681 2247378 - 2247356 - R 100 -16.3 -4.20806 | opp_overlap 2247345 2247356 GACCGTAAAATGAAA CCGGCCGCA ACAGG TGCGGCCGG TTCGATCAGCTTATT TERM 2682 2247356 - 2247378 + r 100 -16.3 -3.08738 | opp_overlap 2247356, overlap 2247345 GACCGTAAAATGAAA CCGGCCGCA ACAGG TGCGGCCGG TTCGATCAGCTTATT braC 2248495 - 2247389 - | ABC transporter, substrate binding protein (branched chain amino acid) TERM 2683 2248529 - 2248515 - H 73 -5.6 -4.56597 | overlap 2248516 GTGTCTCCTTAAAAA GGGGTC GCG GACCCG GTGAGCGCCATGGGC cyaC 2248782 - 2249957 + | adenylate cyclase protein TERM 2684 2250019 - 2250035 + T 74 -11.5 -3.25919 | opp_overlap 2250019, overlap 2250017 CTTCAACAAAAAAAA CCGGCGT CAC GCGCCGG TCTTAATTCACTCAT TERM 2685 2250035 - 2250019 - T 100 -10.8 -6.09888 | opp_overlap 2250019 2250017 CTTCAACAAAAAAAA CCGGCG TCACG CGCCGG TCTTAATTCACTCAT nolR 2250397 - 2250077 - | ArsR family transcriptional regulator TERM 2686 2250911 - 2250891 - R 100 -6.8 -5.45802 | opp_overlap 2250891 GCCCGAAAAGAAAAA GGACCTCC ATTGA GGAAGCCC TTTGCTCTTGTTCAA Atu2279 2251986 - 2250940 - | ABC transporter, nucleotide binding/ATPase protein (proline/glycine betaine) Atu2280 2253014 - 2251983 - | ABC transporter, membrane spanning protein (proline/glycine betaine) TERM 2687 2253149 - 2253176 + r 70 -6.8 -4.21439 | GAGAGCCTTTTTAAC GGCAGGCAGGGC GTCC GCGCTGCCATCC TTTGTCTTGACGTTG Atu2281 2254078 - 2253125 - | ABC transporter, substrate binding protein (proline/glycine betaine) TERM 2688 2254001 - 2253975 - G 75 -2.9 -4.95155 | gap 1, overlap 2253990 2253991 CCGACATCAGAAAAA CGCACCGTGCCA CAAC TTGC-CGGTTCG GCGGCAACGGCCGCG TERM 2689 2254231 - 2254190 - H 74 -7.3 -4.19879 | gap 1, overlap 2254191 2254223 ACAAAATCGTGAAAA TCGCCGCCTTTTC-GCAAAC CCG ATTCGCTGAAACGGCAGCGT GCGGAAATCTGTGTT tdk 2254496 - 2254987 + | thymidine kinase Atu2283 2255101 - 2255553 + | pseudoazurin TERM 2690 2255700 - 2255745 + F 82 -5.4 -5.06816 | gap 3, opp_overlap 2255698 2255718 2255725, overlap 2255701 GGAAGACAGTAAATG GCCGCGGTT-GACAGGGAACGCC AAA GGCA--CCCTGCCGAACCGCGGA TTTTTCTTGCCGCAT TERM 2691 2255701 - 2255744 + F 70 -8.9 -3.63367 | gap 3, opp_overlap 2255698 2255718 2255725, overlap 2255700 GAAGACAGTAAATGG CCGCGGTT-GACAGGGAACGCC AAA GGCA--CCCTGCCGAACCGCGG ATTTTTCTTGCCGCA Atu2284 2255792 - 2256949 + | hypothetical protein TERM 2692 2256957 - 2256978 + T 84 -12.9 -3.32022 | opp_overlap 2256956 2256953 ACCGTTGATAAGGAG GCCGGCCCG CTGT CCGGCCGGC TTACTCTATCAGCCG atxR 2257695 - 2256979 - | LuxR family transcriptional regulator Atu2286 2258310 - 2257789 - | hypothetical protein TERM 2693 2257907 - 2257874 - G 76 -5.4 -4.61566 | gap 2 GCCGAAACGACAAAA GCCAGATGGATGATGG TGAA CCA-CATCAA-CTGGC TGTCCGTATATTGAC TERM 2694 2258068 - 2258023 - G 93 -14.9 -3.86015 | gap 1, opp_overlap 2258028 2258029, overlap 2258028 2258029 2258050 GAGCTTGCCGAGAAA CGA-AACCTCGTCATCCGCCTC ATC GAAGCGGCTGACGAAATTCTCG TAGCCGGAGATCATC TERM 2695 2258062 - 2258028 - G 95 -13.6 -4.13995 | opp_overlap 2258028 2258029, overlap 2258023 2258029 2258050 TGCCGAGAAACGAAA CCTCGTCATCCGCCTC ATC GAAGCGGCTGACGAAA TTCTCGTAGCCGGAG TERM 2696 2258061 - 2258029 - G 80 -14.9 -3.07915 | opp_overlap 2258029 2258028, overlap 2258028 2258023 2258050 GCCGAGAAACGAAAC CTCGTCATCCGCCTC ATC GAAGCGGCTGACGAA ATTCTCGTAGCCGGA TERM 2697 2258597 - 2258620 + H 89 -9.4 -4.57073 | overlap 2258599 2258611 2258611 2258614 CACATCAGACCATGT CCAGCCGCGC TTGA GCGCGGCGCG TTTTTGCGCGCCGTG TERM 2698 2258611 - 2258637 + H 76 -10.1 -3.9122 | gap 1, overlap 2258599 2258597 2258611 2258614 TCCAGCCGCGCTTGA G-CGCGGCGCGT TTTT GCGCGCCGTGGC TTCTTTGCGCGCATA TERM 2699 2258614 - 2258633 + H 76 -12.8 -2.71101 | overlap 2258599 2258597 2258611 2258611 AGCCGCGCTTGAGCG CGGCGCGT TTTT GCGCGCCG TGGCTTCTTTGCGCG TERM 2700 2259474 - 2259496 + G 77 -11.3 -3.67597 | gap 1 CTGGAAGGTGGCCAC CGCATCGGCC TGAC GGCCGA-GCG TTATTCGCTCAGAAA Atu2287 2258667 - 2260907 + | outer membrane heme receptor TERM 2701 2260933 - 2260952 + T 100 -12.8 -5.24129 | AAAATCATCTCCAGT GGGCGGCC CCAG GGTCGCCC TTTTTTGTCAGCGGC Atu2288 2261862 - 2260960 - | hypothetical protein TERM 2702 2261251 - 2261272 + g 74 -3.5 -4.83615 | GCAGATGTAGGTCGA GGCGTTGGC AATG GCCGTCACC TTTTTCTCCGGCATC TERM 2703 2261559 - 2261574 + g 81 -4.6 -4.87626 | GCATCTCGGGTTTTG CCGCCT CGTC AGCCGG TTTTTGCTGTTCCGC TERM 2704 2262067 - 2262088 + H 100 -11.5 -5.68489 | opp_overlap 2262062, overlap 2262083 TCAGACAAAGTCCAA GCCGCCCGA ATTT TCAGGCGGC TTTTTTGTTATTATG TERM 2705 2262276 - 2262286 + G 83 -4.6 -5.14965 | AAAGCTTGATTCCCA TCGC GGC GCGG TTTTTTCGTCCAACT TERM 2706 2263725 - 2263678 - g 89 -12 -4.18197 | overlap 2263660 2263701 ATTCGTGACGCAAAA GGCACCAACTCTGCCGCCACCA AGCG TGATGCCGCCAAAGTCGGCACC GGCGTCAAGATCCTG trpE(G) 2262145 - 2264334 + | anthranilate synthase TERM 2707 2264443 - 2264478 + G 95 -18.4 -3.31792 | gap 1, overlap 2264444 2264447 AATATCTGAGCTTTC TGGAGGCGC-CACCGCT CGA AGCGGTGCGCGCCTTCG TTCTCGACATGATCG TERM 2708 2264444 - 2264477 + G 88 -19.7 -2.58861 | gap 1, overlap 2264443 2264447 ATATCTGAGCTTTCT GGAGGCGC-CACCGCT CGA AGCGGTGCGCGCCTTC GTTCTCGACATGATC TERM 2709 2264447 - 2264474 + G 100 -17.8 -3.44622 | gap 1, overlap 2264444 2264443 TCTGAGCTTTCTGGA GGCGC-CACCGCT CGA AGCGGTGCGCGCC TTCGTTCTCGACATG TERM 2710 2264532 - 2264498 - g 100 -14.5 -4.22652 | gap 2, overlap 2264501 CGACATGATCGAAAA CGACCATCCGCAATTCG TGG CGA-TTGCGGATGG-CG ACGTGATCGGCTGGT TERM 2711 2264530 - 2264501 - g 83 -15.9 -3.11922 | gap 1, overlap 2264498 CATGATCGAAAACGA CCATCCGCAATTCG TGG CGA-TTGCGGATGG CGACGTGATCGGCTG Atu2290 2264334 - 2264843 + | acetyltransferase Atu2291 2265787 - 2264840 - | hypothetical protein TERM 2712 2266036 - 2266022 - H 82 -5 -5.04868 | GCAAATGAAAGAAAA TATCGC ATG GCAATA ATACCAGGAGTCGAA TERM 2713 2267135 - 2267174 + G 76 -13.6 -3.08966 | gap 1, opp_overlap 2267129 ACCCGCAAACCGGTG GCACCCGTC-GGTCTCGAC AGC GTCAAGGCCAGACCGGTGC TTGCCTCCCATTTCG TERM 2714 2267411 - 2267398 - g 70 -3.7 -4.65895 | overlap 2267399 CTTCGGACTGAAAAA GGGCG CCAT CGCCT CCACCGTCGGCCATG adeC 2266028 - 2267755 + | adenine deaminase Atu2293 2268423 - 2267872 - | hypothetical protein Atu2294 2269107 - 2268640 - | aminoglycoside N6'-acetyltransferase aglA 2270768 - 2269104 - | alpha-glucosidase kdgK 2270958 - 2271845 + | 2-dehydro-3-deoxygluconokinase Atu2297 2272177 - 2273226 + | glycosyltransferase Atu2298 2273930 - 2273418 - | hypothetical protein Atu2299 2274759 - 2274151 - | hypothetical protein TERM 2715 2274792 - 2274808 + r 71 -5.8 -4.30719 | overlap 2274785 AAACAAGTCGTTGGG CGAGCG TCCGC CGCTTG TTTCTTCTGCCCGAG engA 2276398 - 2274968 - | GTP-binding protein EngA Atu2301 2277203 - 2276532 - | hypothetical protein TERM 2716 2276674 - 2276653 - G 74 -10.9 -3.53012 | gap 1, opp_overlap 2276640 TTGGCCTTGGCGAAA TCGCCGGCCT TGT AGGC-GGCGA GACCCAGAGCCTCGC TERM 2717 2277313 - 2277291 - R 72 -12 -2.74605 | opp_overlap 2277291, overlap 2277287 2277288 GGTCGGCAAAAGTCA GGCCGACC GGGTCAT GGTCGGCC TTCTAGCCTATTTTG TERM 2718 2277291 - 2277313 + r 84 -12.7 -3.39289 | opp_overlap 2277291 2277287 2277288 GGTCGGCAAAAGTCA GGCCGACCG GGTCA TGGTCGGCC TTCTAGCCTATTTTG Atu2302 2277943 - 2277359 - | hypothetical protein Atu2303 2278094 - 2279077 + | hypothetical protein TERM 2719 2279092 - 2279121 + T 95 -15.1 -3.41023 | opp_overlap 2279098, overlap 2279098 AGGCCCCCGTTTCAC GAAAAAGGCGGCC GATT GGCCGCCTTTTTA TATGTTTTAGGGCTT TERM 2720 2279098 - 2279115 + T 100 -14.1 -5.186 | opp_overlap 2279098, overlap 2279092 CCGTTTCACGAAAAA GGCGGCC GATT GGCCGCC TTTTTATATGTTTTA TERM 2721 2279115 - 2279098 - T 100 -14.1 -4.72272 | opp_overlap 2279098 2279092 CCGTTTCACGAAAAA GGCGGCC GATT GGCCGCC TTTTTATATGTTTTA sbmA 2280273 - 2279128 - | transport protein TERM 2722 2280579 - 2280547 - R 90 -5.4 -5.252 | gap 1 GATCCCCACAAAAAA CGCGGATGGCGGGCC TAAC GTCTC-CCTTCCGCG GCAAGCACCGGCAGC Atu2305 2281751 - 2280561 - | MFS permease TERM 2723 2281835 - 2281866 + r 81 -8 -4.30719 | overlap 2281824 2281838 TTATCGGTGACGCGG TGAGCGGCGATG CGTTCCTA CGTCGCCGCTTG TTTCTTCTCCACGCC TERM 2724 2281838 - 2281863 + r 86 -9.7 -4.27512 | overlap 2281824 2281835 TCGGTGACGCGGTGA GCGGCGATG CGTTCCTA CGTCGCCGC TTGTTTCTTCTCCAC map 2282714 - 2281962 - | methionine aminopeptidase TERM 2725 2282547 - 2282565 + g 76 -13.1 -3.40403 | opp_overlap 2282545 2282544 TTTGTAGCAGAACTC CGGCGCG GATTG CGCGCCG TTATCCTCCAGCACC Atu2307 2283830 - 2282769 - | monooxygenase TERM 2726 2283228 - 2283211 - G 76 -9.1 -4.12599 | overlap 2283201 2283212 AACAACGGTGCAAAA CGGCGGT ATTC ACCGCCA ATGATGGCAAGCGCC TERM 2727 2283790 - 2283744 - G 74 -12.1 -3.14344 | gap 1 GATTTCCTCGAGCAA TTCCCGCAGCCGG-CGCGCGCC TTCA GGCCCGCGGCCATCGGCGGGAT TGGGATTGACATCCG TERM 2728 2284219 - 2284189 - g 76 -6 -4.7173 | overlap 2284191 2284214 2284215 GACGAGATCGAAAAA CTGCGCCTTCTGCT GGA AGCCGAAAGCGGCG GGCGGGTGCTTTACC TERM 2729 2284281 - 2284255 - g 91 -13.8 -3.81951 | GCCGATATGACGAAA CCGGACGAGATC GCC GATCTCATCCAG TCCTCACACGAAAAA bdhA 2284063 - 2284839 + | d-beta-hydroxybutyrate dehydrogenase TERM 2730 2285917 - 2285893 - g 72 -12.2 -3.02144 | overlap 2285881 2285872 CGATTGGCGGCAACA TCGCCAATGG CTCGC CCATCGGCGA CACGCCACCGGCGCT xdhA 2284977 - 2286446 + | xanthine dehydrogenase TERM 2731 2287569 - 2287581 + G 74 -3.3 -4.7254 | overlap 2287568 2287567 TCGACGCCACCTATG CGGCA CGC TGCGG TTTTTCCTCCGACCT TERM 2732 2288479 - 2288494 + G 84 -5.4 -5.00196 | gap 1, overlap 2288470 CTGGGACCGCGCCGC CGGCCGT GGC ACG-CCG TTTTATTATTTCGCC xdhB 2286728 - 2288980 + | xanthine dehydrogenase C-terminal subunit xdhC 2288977 - 2289849 + | xanthine dehydrogenase chaperone TERM 2733 2290061 - 2290046 - f 70 -3.2 -4.82901 | GTTTCGGGAGAAAAA CCAATG AAAC CTTTGG CGACTAGCATAAAGA Atu2312 2290087 - 2291016 + | LysR family transcriptional regulator Atu2313 2291336 - 2290992 - | hypothetical protein TERM 2734 2291366 - 2291355 - H 74 -7.2 -4.17048 | overlap 2291352 CTCCGTTGAAAACAA CGGC GGCT GCCG GAAGGTCATTGCGTC TERM 2735 2291870 - 2291883 + G 75 -2.4 -4.93877 | TCACCGCCATCGCCT GGAT CGGCTC ATCC TTTTATTTCATCGCG Atu2314 2291794 - 2293056 + | hypothetical protein TERM 2736 2293179 - 2293166 - g 71 -8.1 -4.07568 | CCTGCTTCTCGAAAA CGGCA GGAT TGCCG CCATCGGCGAATACG gda 2293053 - 2294363 + | guanine deaminase TERM 2737 2294420 - 2294436 + F 74 -6.5 -4.30719 | overlap 2294423 CCAATATCCATGGAG TGAGCGG ATG CCGCTTG TTTCTTCTCCCCGCC TERM 2738 2294423 - 2294433 + F 81 -8.2 -4.27512 | overlap 2294420 ATATCCATGGAGTGA GCGG ATG CCGC TTGTTTCTTCTCCCC Atu2316 2294578 - 2295249 + | hypothetical protein TERM 2739 2295299 - 2295313 + T 75 -7.1 -4.39877 | TTAGCGGCTTGATCG CCGTG TAGCT CACGG TTTCTTCGTTATTGG Atu2317 2295875 - 2295279 - | hypothetical protein TERM 2740 2296186 - 2296176 - g 71 -6.8 -4.1891 | TTTTGCCAAGATAAA GCTG CGC CAGC GCGTGCTGGTGGATA lldA 2296021 - 2297169 + | L-lactate dehydrogenase Atu2319 2297710 - 2297366 - | quaternary ammonium compound-resistance protein Atu2320 2298291 - 2297707 - | TetR family transcriptional regulator Atu2321 2298457 - 2299752 + | D-alanyl-D-alanine carboxypeptidase (penicillin binding protein) Atu2322 2300497 - 2299754 - | hypothetical protein Atu2323 2300859 - 2300503 - | hypothetical protein allA 2301356 - 2300856 - | ureidoglycolate hydrolase TERM 2741 2301122 - 2301109 - G 70 -3.1 -4.60924 | gap 1, opp_overlap 2301118 GAAAGCGGCGAAAAA CTCTGG CTG CC-GAG CGGATGCCGCTCCAT Atu2325 2301722 - 2301360 - | hypothetical protein Atu2326 2302012 - 2301719 - | hypothetical protein Atu2327 2302563 - 2302066 - | hypothetical protein TERM 2742 2302241 - 2302229 - G 77 -7.7 -4.30416 | ATGATGAAGGGAAAA CCGAA TTT TTCGG TATAGGCGCTGTTCA Atu2328 2303486 - 2302563 - | hypothetical protein TERM 2743 2302675 - 2302663 - G 76 -10.5 -3.75933 | ACATATTCGATGAAA CGGCG CAG CGCCG CGGCCCGGCCCGGCC TERM 2744 2303616 - 2303656 + r 100 -9.3 -5.37043 | gap 3, opp_overlap 2303613 CGAACGGTAACATCC GCATCCGGAATGTCGAGACA ATCT TG-C-CGACATTCCG-ATGC TTTTTTGTATACGAT Atu2329 2304395 - 2303688 - | hypothetical protein Atu2330 2305610 - 2304492 - | oxidoreductase Atu2331 2305705 - 2306460 + | hypothetical protein Atu2332 2310183 - 2306488 - | two component sensor kinase/response regulator hybrid TERM 2745 2306953 - 2306976 + g 76 -9.4 -4.03413 | overlap 2306951 TCGTTGCTTCTTTTC GGCGGGCCGG CTTT CCGGCCGGGC TTTCTCTCCACCCGT TERM 2746 2307731 - 2307687 - G 83 -4.2 -5.09895 | gap 1, overlap 2307688 CACGCAGTGAAAAAA TGCTTTCCGACGCCTCCGCCG ACTG CGCCGAAAGC-TCGACCAGCA CATGCCCGGTTTCGG TERM 2747 2308319 - 2308306 - G 82 -9.5 -4.32049 | opp_overlap 2308304 GACAAGCCAGGAAAA CGGCC TGTT GGCCG CGATATTCTCTCTCC TERM 2748 2308639 - 2308655 + g 71 -7.9 -4.11216 | GGTGCTGAGGATCTT CCCGCCT TCG AGACGGG TTTTCGAGATCACGG TERM 2749 2308942 - 2308920 - G 84 -9.8 -4.25104 | CGGCGTTGAGCAAAA GCACGCCC ACGGGCA GGGCGCGC AGAACCGCCTGGAGC TERM 2750 2310099 - 2310126 + g 74 -6.2 -4.56597 | gap 1, overlap 2310101 TGATGCACGCGGGCA GC-TCCAGGGCGG CAA CGGCCCTGCATGC TTTTTCCAGCAACCC TERM 2751 2311674 - 2311692 + G 78 -10.2 -3.85698 | CCGCCCGCGCCGGCC GCGACGGC ATC GCCATCGC TTTCTGCGCACCGGA TERM 2752 2312043 - 2312008 - g 79 -16.1 -2.70932 | gap 1, overlap 2311966 CGGCCCGCGCAAGCA GCGCCGCC-CCGCCCG CAAGC CCGGCGGCAGCGGCGC CAACCGCCACGCACC Atu2333 2310614 - 2312122 + | ATP-dependent RNA helicase TERM 2753 2312200 - 2312174 - T 93 -13.6 -3.90112 | opp_overlap 2312175, overlap 2312175 CGCTCGCCAATCAAA GCCCCGCAGGCA ATC CGCCCGCGGGGT TTTTCTTTGTCTTCA TERM 2754 2312175 - 2312199 + T 100 -14.2 -5.4659 | opp_overlap 2312175 2312174 GCTCGCCAATCAAAG CCCCGCAGGC AATCC GCCCGCGGGG TTTTTCTTTGTCTTC TERM 2755 2312199 - 2312175 - T 93 -17.1 -2.93853 | opp_overlap 2312175, overlap 2312174 GCTCGCCAATCAAAG CCCCGCAGGCA ATC CGCCCGCGGGG TTTTTCTTTGTCTTC Atu2334 2313121 - 2312213 - | hypothetical protein TERM 2756 2312933 - 2312908 - G 74 -3.2 -4.78572 | gap 1, overlap 2312909 CCTGAACGAAGAAAA GCCGCCACGTT GCGGG ATCGCG-CGGC AACCGCAGCCCGCGC TERM 2757 2313183 - 2313200 + r 71 -9.9 -3.53811 | opp_overlap 2313170 AACCAAGCATCTATG CTTCGGT GAAG ACCGAAG TTTCCGCCGCATCAA TERM 2758 2313256 - 2313221 - R 100 -24.9 -3.71284 | GCCGCATCAATACAA TGAGGCCCCGCATGG TTCCAG CCATGCGGGGCCTCA ATAAAGATCGGTGAT TERM 2759 2313307 - 2313264 - R 86 -12.6 -3.6761 | gap 2, opp_overlap 2313274, overlap 2313262 GGGCCTCAATAAAGA TCGGTG-ATGA-CGGCGGGC GATCAG GCCCGGCGTTCATCCACCGA GAAAGCGCCCGCACC Atu2335 2313679 - 2313284 - | hypothetical protein TERM 2760 2313908 - 2313893 - R 74 -10.4 -3.53012 | TTTTCGCGTGGCAAA GGCGGA AAAA TCCGCC TCCCCGTCAGGCTTG Atu2336 2314532 - 2313915 - | hypothetical protein TERM 2761 2314099 - 2314088 - G 74 -7.2 -4.40003 | opp_overlap 2314091 2314095, overlap 2314089 CGCGATAAAGATAAA GCGC CCGT GCGC CGAGCGGGTTGTTGG Atu2337 2315507 - 2314611 - | hypothetical protein TERM 2762 2315360 - 2315345 - G 76 -10.4 -3.72576 | GCTTCGGCCACGAAA TGCCGG AAAA CCGGCA GATCGCCCATAATAG TERM 2763 2316338 - 2316352 + G 79 -12.8 -3.53761 | opp_overlap 2316329 AAATGATCGGCTTCA CGCCGC CTG GCGGCG TTTACACCCACATTG Atu2338 2315968 - 2317362 + | hypothetical protein Atu2339 2317366 - 2318307 + | hypothetical protein Atu2340 2318329 - 2319150 + | hypothetical protein TERM 2764 2319530 - 2319550 + G 90 -6 -5.24531 | TCGGCCGCATCCACA CGGCGCTC AAACC GGGCGGCG TTTTTTATGCGAGCT Atu2341 2319154 - 2319750 + | methyltransferase Atu2342 2319817 - 2320332 + | hypothetical protein Atu2343 2320882 - 2320424 - | acetyltransferase TERM 2765 2321216 - 2321227 + G 70 -3.6 -4.66987 | TGGTGCTGAAACTGC CCGG CCAG CTGG TTTTCTTCAAATGTG Atu2344 2321107 - 2321517 + | lactoylglutathione lyase gguC 2322764 - 2321718 - | hypothetical protein TERM 2766 2322582 - 2322596 + g 72 -12.8 -3.05384 | opp_overlap 2322568 ATCGGCGAGGCTCTT GCCGCC ATT GGCGGC TTCCATGGCGAGCGC TERM 2767 2322730 - 2322742 + g 76 -10.5 -3.72788 | GGATTTCCTTCCTCC GGCGC AAT GCGCC TTGTCTCTTCTACGC TERM 2768 2322785 - 2322803 + r 100 -16 -5.09225 | opp_overlap 2322785 CTGCATCTTATGAAA GTGGCCGG AAA CCGGCCAC TTTTTTGACTGCGAT TERM 2769 2322803 - 2322785 - R 100 -16 -3.74693 | opp_overlap 2322785 CTGCATCTTATGAAA GTGGCCGG AAA CCGGCCAC TTTTTTGACTGCGAT gguB 2324029 - 2322833 - | ABC transporter, membrane spanning protein (sugar) gguA 2325564 - 2324026 - | ABC transporter, nucleotide binding/ATPase protein (sugar) TERM 2770 2325640 - 2325616 - R 100 -13.6 -4.66163 | opp_overlap 2325614 ATTTTTATGGAAAAA CGGGGATGAC GCCAA GCCATCCCCG CATGTGTCTTCAGCT chvE 2326719 - 2325655 - | sugar binding protein TERM 2771 2326683 - 2326655 - G 70 -10.2 -3.53012 | overlap 2326656 TTGTCCTGTGCGAAA GCCGGCGCTGCG AAGGA CGCAGCACCGAT GGCACAAGCTGCCAT TERM 2772 2326682 - 2326656 - G 73 -13.7 -2.71712 | overlap 2326655 TGTCCTGTGCGAAAG CCGGCGCTGCG AAGGA CGCAGCACCGA TGGCACAAGCTGCCA Atu2349 2326755 - 2326937 + | hypothetical protein TERM 2773 2327266 - 2327236 - g 71 -8.9 -3.72576 | gap 1, opp_overlap 2327241 2327243 GTGGTGCTGACGAAA TTC-GGCGAGGCGC TGGC GCGCCGCGCCCGCA CCATATTGCTGGAAC gbpR 2327065 - 2327979 + | LysR family transcriptional regulator TERM 2774 2328132 - 2328116 - g 75 -8 -4.17309 | overlap 2328123 CAGGAGAAAGAAGAA GAAGGC ACGGA GCCTTC ACCGCCGGCCGGCCA TERM 2775 2328408 - 2328389 - g 70 -4.8 -4.56775 | opp_overlap 2328376, overlap 2328390 ACCCTTGCGGAAAAA CGCCGGGC TTTC GCACGGCT CAATCATCCCGACCG Atu2351 2328053 - 2328529 + | hypothetical protein Atu2352 2328848 - 2328585 - | hypothetical protein Atu2354 2329612 - 2329106 - | MarR family transcriptional regulator TERM 2776 2329969 - 2329947 - R 74 -2.6 -5.0133 | overlap 2329953 GATTCCGTTAAAAAA GCAATACATC GAC GACGGATGGC CCGCATTGCCACATA TERM 2777 2330359 - 2330381 + r 75 -4.1 -4.85782 | gap 1 CGGACTCTACGCTTG GCGTC-GGCT GCGC AGCCAGAAGC TTTCTTTTTCGAACA exoQ 2331772 - 2330339 - | exopolysaccharide production protein TERM 2778 2330978 - 2330942 - G 79 -12.9 -3.54741 | CAGCATCTGCGCAAA CACCGGATCGACCGTGG TGC CCACGGTCACGACGGTG AAGACCAATAGAAGC TERM 2779 2331194 - 2331206 + g 71 -9.1 -3.84406 | CAGCACCGCCATGAC CGAGG CGG CCTCG TTCTTGTGCTGAAAA Atu2357 2331868 - 2332080 + | hypothetical protein TERM 2780 2332877 - 2332888 + G 74 -3.6 -4.77036 | CGCCTGATGACCTGG GGCG TGCC TGCC TTTTTCCTCGTGGCC Atu2358 2332208 - 2333191 + | acetyltransferase Atu2359 2333630 - 2333226 - | hypothetical protein TERM 2781 2333684 - 2333712 + r 87 -16.1 -2.87564 | opp_overlap 2333684, overlap 2333686 GATGGTGCCCATAAA TACCGCGCAGG AATAAAA CCTGCGCGGTA TGTCTCCAAGCCTGC TERM 2782 2333712 - 2333684 - R 100 -16.1 -3.86015 | opp_overlap 2333684 2333686 GATGGTGCCCATAAA TACCGCGCAGG AATAAAA CCTGCGCGGTA TGTCTCCAAGCCTGC TERM 2783 2333686 - 2333710 + r 86 -14.3 -2.98942 | opp_overlap 2333684, overlap 2333684 TGGTGCCCATAAATA CCGCGCAGG AATAAAA CCTGCGCGG TATGTCTCCAAGCCT mcpA 2335740 - 2333791 - | methyl-accepting chemotaxis protein Atu2361 2337376 - 2336174 - | MFS permease TERM 2784 2337116 - 2337100 - G 70 -5 -4.57073 | overlap 2337102 GACTGTCGGCAAAAA GGCCGG ATATG CCGGAC AGGCTGTAAAGCAGG TERM 2785 2337453 - 2337476 + r 72 -11.7 -2.71497 | opp_overlap 2337438 2337453, overlap 2337452 2337448 GCCGCGGACAAAAAA GCGGCAGGC CTTTCA GCCTGTCGC ATTCATTTCCAATAG TERM 2786 2337476 - 2337453 - R 100 -10.2 -5.24129 | opp_overlap 2337452 2337448 2337453, overlap 2337438 GCCGCGGACAAAAAA GCGGCAGGCC TTTC AGCCTGTCGC ATTCATTTCCAATAG Atu2362 2338428 - 2337514 - | S-methyltransferase Atu2363 2339139 - 2338450 - | ABC transporter, membrane spanning protein TERM 2787 2338864 - 2338846 - G 78 -2.2 -5.06414 | GGCGGCGAAGAAAAA GCCCTCGC GCA GCACCGGC CACATGAAACTCTGG TERM 2788 2338958 - 2338947 - G 71 -7.2 -4.26344 | overlap 2338948 AGAGCTGGATCAAAA GCGG CGTG CCGC GGAAGAAGGTGCAAT Atu2364 2339873 - 2339151 - | ABC transporter, membrane spanning protein TERM 2789 2339742 - 2339720 - G 74 -11.3 -3.53012 | GCCTGTTGCCGGAAA GCTTGCCGA GCGCG CCGGCAAGC CCGATAACGATACCA Atu2365 2340666 - 2339896 - | ABC transporter, substrate binding protein (amino acid) TERM 2790 2340296 - 2340307 + g 71 -7.2 -4.14392 | overlap 2340291 TTGACGTCTTCCGGT GCCG CACC CGGC TTTTCACCCTTGGCG TERM 2791 2340460 - 2340478 + g 78 -3 -5.04868 | opp_overlap 2340462, overlap 2340461 2340462 GAGGCCATCCCAGGA AAGCTCGA CGA TCGAGCAC TTTTCTTTCATTTCC TERM 2792 2340476 - 2340462 - G 76 -10 -3.74693 | opp_overlap 2340461 2340460 2340462 GGCCATCCCAGGAAA GCTCGA CGA TCGAGC ACTTTTCTTTCATTT TERM 2793 2340643 - 2340631 - G 71 -9.1 -3.71649 | GGCGGAAACCGCAAA TGCCG TTC CGGCA AGCAGCGTGGCGAAG nocP1 2341487 - 2340711 - | ABC transporter, nucleotide binding/ATPase protein Atu2367 2341691 - 2341993 + | hypothetical protein TERM 2794 2342071 - 2342083 + GF 76 -5.5 -4.67354 | overlap 2342064 GCGCTTCGCGGGCGG CTCGT TTC ACGGG TTTTATATCTATATT TERM 2795 2342162 - 2342150 - gf 73 -4.7 -4.64657 | GTAAATGCGCAAAAA GCTGG AGG CCGGC GGTGGACGTTCAGAT Atu2368 2342027 - 2342236 + | hypothetical protein TERM 2796 2342419 - 2342394 - gT 88 -11.1 -4.09685 | CTTCAGCCCGGAAAA CGGCAGCGTCG TCTA CGACACTGGCG AAAGGGTCACGAGCG Atu2369 2342176 - 2343324 + | hypothetical protein Atu2370 2344450 - 2343365 - | hypothetical protein xynA 2345514 - 2344447 - | endo-1,4-beta-xylanase TERM 2797 2345452 - 2345440 - G 70 -10.5 -3.53012 | CTTCTGCGCGGCAAA GGCCG GCC CGGCC ACGGCATGCAACAGG TERM 2798 2346276 - 2346303 + G 70 -12.6 -2.94235 | overlap 2346285 GCGGAAGACTGGTAT GGCTGGTGCCGG CTGG CCGCCGCCGGCC GTTTCGTCTATCTGC TERM 2799 2346285 - 2346304 + G 86 -12.8 -3.91196 | overlap 2346276 TGGTATGGCTGGTGC CGGCTGGC CGCC GCCGGCCG TTTCGTCTATCTGCC TERM 2800 2346525 - 2346544 + G 76 -5.6 -4.59853 | gap 1 GCACAGGCCTTCCGC GCC-CGCCG CTA CCGCGAGGC TTTTTCGGCGCTTGC exoU 2345691 - 2346635 + | UDP-hexose transferase TERM 2801 2346839 - 2346829 - g 77 -8.2 -4.37092 | ATTTTTCGCACAAAA CGGC ATG GCCG GTCAGGCACTGGTGG exoM 2346644 - 2347588 + | UDP-hexose transferase Atu2374 2347954 - 2347613 - | hypothetical protein Atu2375 2348839 - 2348039 - | UDP-hexose transferase TERM 2802 2348298 - 2348286 - G 76 -9.1 -4.05788 | TTGCGCGAAACGAAA CGCTG CTC CAGCG GAATACCAAAGCCGA TERM 2803 2348711 - 2348699 - G 73 -4.8 -4.64676 | CGAGGTCGAATAAAA CGGT CTTGC ACCG GCCACGCGCTCTGTC TERM 2804 2348972 - 2348982 + r 70 -6.8 -4.08767 | opp_overlap 2348964 TTATAAATCCCCACA TGCC GCG GGCA TTTTACACGCCTGAA Atu2376 2349247 - 2348957 - | hypothetical protein Atu2377 2350715 - 2349321 - | succinoglycan biosynthesis transport protein TERM 2805 2350754 - 2350809 + H 100 -21.3 -3.34715 | gap 2, overlap 2350763 AAGCCGCCCTCACCC GCGTCTCGA-CCGGGGCCGGC-TCGGC AGCG GCCGGCGCCGGTTTCGGCTCGAGATGC TCTTTCAGCACCGTG TERM 2806 2350763 - 2350793 + H 100 -16.1 -3.60296 | gap 1, overlap 2350754 TCACCCGCGTCTCGA CCGGGGCCGGCTCG GCAG CG-GCCGGCGCCGG TTTCGGCTCGAGATG TERM 2807 2350883 - 2350894 + G 89 -7.2 -5.14563 | overlap 2350881 2350885 AACCATGGGTTCTGG CGGC GGGC GCCG TTTTTTCATCGAGCG Atu2378 2350872 - 2351051 + | hypothetical protein TERM 2808 2351443 - 2351412 - g 81 -5.1 -5.00616 | gap 1, opp_overlap 2351436 2351436, overlap 2351413 GCCGCGCTGAAAAAA GCCG-GCCTCAATC CGCTC GATTGCGGCACGGT GCCGACCCCGGCACT TERM 2809 2352406 - 2352376 - g 83 -5.2 -5.14563 | overlap 2352378 TCGCCCAGGAAAAAA GCGCCGCCCTGATG ACG CATCTGCGCGCCTC CCGCGACAACCTCGA noeK 2351208 - 2352623 + | phosphomannomutase TERM 2810 2352834 - 2352848 + G 70 -4.9 -4.48221 | GATGCGACCGTCAGG GCGCT CACCC GGCGC TTTTATGAATTGATG Atu2380 2352777 - 2353178 + | hypothetical protein TERM 2811 2353362 - 2353403 + G 83 -4.4 -5.15167 | gap 3, opp_overlap 2353362 CGGACCGCATCAGAA CCGCCATTCCGGCGGGCCTGA TCC TC-GGCCT-C-GGCACGGCGG TTTTTGTTGGTGATC Atu2381 2353175 - 2353540 + | hypothetical protein Atu2382 2353837 - 2353547 - | hypothetical protein Atu2383 2354243 - 2353818 - | hypothetical protein TERM 2812 2354154 - 2354136 - G 73 -5.2 -4.68511 | opp_overlap 2354136 2354142 GCCAACATAAAGAAA GCTCTTCG GAC CGGAAAGC TGCTGTTCGGCCACG TERM 2813 2354208 - 2354219 + g 78 -7.2 -4.71463 | CTTACCCTGCTTGCC GCCG CGTT CGGC TTTCTTCTTTTCCTT Atu2384 2355046 - 2354405 - | TetR family transcriptional regulator TERM 2814 2355401 - 2355377 - g 71 -7.7 -4.13014 | TGGACATGGCGAAAA TCGGCCCCGGC ATT GCCGGCGGCAA TAATCGCCGCACGCT amaB 2355325 - 2356554 + | allantoate amidohydrolase TERM 2815 2356590 - 2356574 - g 72 -2.1 -4.78107 | CACCATCATCAAAAA CGGCACC ATC GTCACCG CCGACCTCACCTACA TERM 2816 2357295 - 2357319 + G 91 -13.5 -3.85698 | opp_overlap 2357265 2357286 CATGAAGCCATCCGC CGCGCGCGCCA GAA TGGCATGCGCG TTTATGGCGAACCGC dht 2356551 - 2358008 + | dihydropyrimidinase Atu2387 2358011 - 2358448 + | MutT family NTP pyrophosphatase Atu2388 2358445 - 2359239 + | ABC transporter, nucleotide binding/ATPase protein (nitrate) Atu2389 2359474 - 2360349 + | ABC transporter, membrane spanning protein TERM 2817 2360822 - 2360834 + G 81 -7.7 -4.60487 | opp_overlap 2360813 AAAAGTCGCCGTCGT CGTCA TCA TGACG TTTTTCCCCATGCTG TERM 2818 2361102 - 2361143 + G 79 -9.3 -4.17657 | gap 1, opp_overlap 2361115 2361116 AGCAATGTCGATATG GTCTGGG-CCGAAATCGCCG TTG CGGCGCTTGCGGGCTCCGGC TTTTACGGTCTGGTG Atu2390 2360346 - 2361218 + | ABC transporter, membrane spanning protein Atu2391 2361240 - 2362232 + | ABC transporter, substrate binding protein (nitrate/sulfonate/taurine/bicarbonate) TERM 2819 2362252 - 2362282 + F 80 -9.6 -3.92373 | opp_overlap 2362253 2362254 2362257, overlap 2362255 2362258 AGTGACGTCCGAATA ATGGAGCGCGCGGG AGG TCCGCGCGTTCTGG TTTATGACTCGCATG TERM 2820 2362255 - 2362279 + F 93 -15.7 -3.02745 | opp_overlap 2362254 2362253 2362257, overlap 2362252 2362258 GACGTCCGAATAATG GAGCGCGCGGG AGG TCCGCGCGTTC TGGTTTATGACTCGC TERM 2821 2362258 - 2362276 + F 89 -13.8 -3.65317 | opp_overlap 2362257 2362254 2362253, overlap 2362255 2362252 GTCCGAATAATGGAG CGCGCGGG AGG TCCGCGCG TTCTGGTTTATGACT TERM 2822 2363502 - 2363531 + G 89 -12.9 -4.12188 | gap 1 AGAATGCGAAGGTCG GCGCGATTGCCAGC GGT GCCGGCAATC-CGC TTTTCACCGTCATCA Atu2392 2362835 - 2364028 + | HlyD family secretion protein TERM 2823 2366630 - 2366600 - g 81 -13.4 -3.32022 | CGTGGCAGAGACCAA GCTTCCGGCAAG CGTCCGC CTTGCCGAAAGC GGTGACGCCAAGGTG Atu2393 2364042 - 2367362 + | Acr family transporter TERM 2824 2367372 - 2367392 + F 100 -15.4 -5.49568 | opp_overlap 2367366 2367365 GAATGAAAGTTGCAA CGCCGGGC CTCGT GCCCGGCG TTTTTATTTTGGCTT sinR 2367708 - 2368397 + | regulator of biofilm formation, Fnr family TERM 2825 2368449 - 2368414 - T 90 -17.6 -2.63479 | opp_overlap 2368418, overlap 2368418 AACACCGGGAGAGGA TGAAGGGCGGTATGCC AACC GGCATGCCGCCCTTCT GCATGACTGAAAGCG TERM 2826 2368418 - 2368445 + T 100 -19.2 -3.36878 | opp_overlap 2368418 2368414 CCGGGAGAGGATGAA GGGCGGTATGCC AACC GGCATGCCGCCC TTCTGCATGACTGAA TERM 2827 2368445 - 2368418 - T 100 -17 -3.24747 | opp_overlap 2368418, overlap 2368414 CCGGGAGAGGATGAA GGGCGGTATGCC AACC GGCATGCCGCCC TTCTGCATGACTGAA Atu2395 2369294 - 2368470 - | metal dependent hydrolase TERM 2828 2368570 - 2368528 - G 85 -6.3 -5.03314 | gap 2, overlap 2368553 TCGATGTGGAAAAAA CCACCGA-GATGACC-GCCGG AAA CCAGCCAGCCATGATCGGCGG CTTCAGCCAGCGCCG TERM 2829 2368861 - 2368846 - G 80 -11.8 -3.76373 | opp_overlap 2368851 GCGGCAAGATCGAAA CCGCCC TGCC GGGCGG GCGGCAATGTCTTGC ureG 2369909 - 2369298 - | urease accessory protein ureF 2370799 - 2370167 - | urease accessory protein TERM 2830 2370787 - 2370765 - G 88 -6.9 -4.87626 | overlap 2370766 2370779 CCGGAATAGGAAAAA CCGCCAACC GGAAA GGCCGGCGA CAGCCAGGCCATCAG TERM 2831 2370813 - 2370825 + r 74 -10.5 -3.55444 | ATCAGCCGCAGCAGC GCGGC AAC GCCGC TTTCCGCGCTCACGC ureE 2371417 - 2370842 - | urease accessory protein UreE TERM 2832 2371441 - 2371425 - R 85 -6.5 -4.96848 | CGCTGCATATAAAAA TCCGGCA GAG TTCCGGA AAGGATGCGTATTAT TERM 2833 2371601 - 2371618 + r 76 -12.7 -2.71712 | overlap 2371600 AGCGGCCAGAGGTGA CCCGGCA TTGC TGCCGGG CTTTCACCAGAAACG TERM 2834 2371648 - 2371660 + r 90 -10.5 -4.28049 | opp_overlap 2371647 2371633 GAAAACCGAGATCAG GCCGC AGC GCGGC TTTTCAGGTTTTCCA Atu2399 2372180 - 2371644 - | hypothetical protein TERM 2835 2372199 - 2372240 + r 71 -4.3 -4.62168 | overlap 2372202 TTGTCTCCTGTTCTG GCATTTTACGCGGCTCGCT TGGG ATCGATCCGCGCGGAATTC TTTTATCGTTTCCAT Atu2400 2373001 - 2372336 - | hypothetical protein TERM 2836 2372501 - 2372480 - G 70 -5.1 -4.56775 | gap 1 ATTCGCCTCGAAAAA CGCAT-CGGT CAG ACCGTAGGCG ACACCGGGAACCAGC TERM 2837 2372944 - 2372919 - G 100 -10.3 -5.02074 | overlap 2372921 TCATCGGCGAAAAAA GGGCGCGGCAC CACG GTGCCGAGCAC GAGAAGCAGGACCAC ureC 2374722 - 2373013 - | urease subunit alpha Atu2402 2375356 - 2374727 - | urease accessory protein Atu2403 2375796 - 2375377 - | hypothetical protein Atu2404 2376162 - 2375806 - | hypothetical protein ureB 2376469 - 2376164 - | urease subunit beta Atu2406 2376749 - 2376492 - | hypothetical protein ureA 2377061 - 2376759 - | urease subunit gamma ureD 2377899 - 2377168 - | urease accessory protein Atu2409 2379182 - 2377926 - | hypothetical protein TERM 2838 2379060 - 2379025 - G 74 -3.1 -4.79756 | gap 1, overlap 2379026 2379028 2379029 GAGAGAATGGAAAAA TCATGCCGG-CCCGGC TCCAT GCCAGGTCCGGGAAGC TGGCCGCAGGTCGAT TERM 2839 2379160 - 2379146 - G 72 -12.8 -3.05844 | GGGCGGAGCGGAACA GCCGGG CAG CCCGGC CAGTTGCAAAGTCTT TERM 2840 2379413 - 2379423 + r 81 -8.2 -4.35518 | overlap 2379394 TGCACGCCGTGATCG GCGC GCA GCGC TTTTACTCTCCGATT Atu2410 2380132 - 2379437 - | ABC transporter, nucleotide binding/ATPase protein (urea/amide) Atu2411 2381087 - 2380326 - | ABC transporter, nucleotide binding/ATPase protein (urea/amide) Atu2412 2382270 - 2381092 - | ABC transporter, membrane spanning protein (urea/amide) Atu2413 2383880 - 2382267 - | ABC transporter, membrane spanning protein (urea/amide) TERM 2841 2382950 - 2382928 - G 74 -6.9 -4.3898 | overlap 2382942 ACGAGGCCGACAAAA CCTGTCACC AGAAA GGCGACTGG CAAGGCAATCGCCAG TERM 2842 2383571 - 2383585 + g 79 -12.8 -3.55444 | TGACGGCAGCCTTGG GCGCCG AGC CGGCGC TTTCACCCGTCAGCG Atu2414 2385455 - 2384166 - | ABC transporter, substrate binding protein (urea/amide) Atu2415 2385994 - 2385797 - | glutamine synthetase translation inhibitor TERM 2843 2386094 - 2386084 - H 100 -3.2 -6.15828 | TTGATTAAAAAAAAA TCAC GTT GCGA AAAATATAGGCATTA glnA 2386484 - 2387518 + | glutamine synthetase TERM 2844 2387566 - 2387522 - f 78 -12.2 -3.28712 | gap 1, opp_overlap 2387531, overlap 2387527 2387531 GCTGCTGCCTGATAA CTTAAGGCATGGCGTCGCCCG CAAC CGGGCGACGCCATTT-TTATG TCCATCGAACGGCTG TERM 2845 2387562 - 2387527 - f 87 -13.2 -3.23274 | opp_overlap 2387531, overlap 2387522 2387531 TGCCTGATAACTTAA GGCATGGCGTCGCCCG CAAC CGGGCGACGCCATTTT TATGTCCATCGAACG TERM 2846 2387558 - 2387531 - f 100 -22.8 -2.57985 | opp_overlap 2387531, overlap 2387527 2387522 TGATAACTTAAGGCA TGGCGTCGCCCG CAAC CGGGCGACGCCA TTTTTATGTCCATCG TERM 2847 2387531 - 2387558 + F 100 -22.8 -4.99035 | opp_overlap 2387527 2387522 2387531 TGATAACTTAAGGCA TGGCGTCGCCCG CAAC CGGGCGACGCCA TTTTTATGTCCATCG TERM 2848 2388338 - 2388373 + G 82 -11 -3.85698 | overlap 2388340 GTACCGCTGGAGCGC TGGGGCAGACCCGATG AAAT CGCCGGGGCTGCCCTG TTTCTCGCCAGCGAC TERM 2849 2388340 - 2388371 + G 86 -13.6 -3.51934 | overlap 2388338 ACCGCTGGAGCGCTG GGGCAGACCCGATG AAAT CGCCGGGGCTGCCC TGTTTCTCGCCAGCG Atu2417 2387681 - 2388451 + | gluconate 5-dehydrogenase TERM 2850 2389923 - 2389946 + G 77 -11 -3.58726 | opp_overlap 2389940 ATCGCCTCCCCCGCC CTCGCCCTTG CCAC CAAGGGCAAG TTCTATCTCGCCCGC Atu2418 2388495 - 2391890 + | two component sensor kinase Atu2419 2391887 - 2392816 + | LuxR family transcriptional regulator Atu2420 2393099 - 2393623 + | hypothetical protein Atu2421 2394362 - 2393646 - | chitooligosaccharide deacetylase TERM 2851 2394481 - 2394462 - R 100 -15 -5.61881 | opp_overlap 2394462 CGTCAAAAACAAAAA GCCCGGCA TCGC TGCCGGGC TTCGATAGTGTATCG TERM 2852 2394462 - 2394481 + r 91 -15 -3.12606 | opp_overlap 2394462 CGTCAAAAACAAAAA GCCCGGCA TCGC TGCCGGGC TTCGATAGTGTATCG Atu2422 2395623 - 2394505 - | ABC transporter, substrate binding protein (amino acid) TERM 2853 2395063 - 2395078 + g 85 -6 -5.01811 | GACCTCAGTCACGCC GGCAGC ATTG GCAGCC TTTTTGGTTTCATCG Atu8177 2396095 - 2395742 - | hypothetical protein TERM 2854 2395898 - 2395883 - G 71 -9 -3.7212 | AAACACGTAATAGAA GCCGTT GATG AACGGC CCGTTGAAGAGCGCG TERM 2855 2396159 - 2396171 + r 76 -3.3 -5.011 | overlap 2396150 2396149 TGTCGTCCCGTCGTT TTCCC GCC GGGCA TTTTATTGTTTGCGT Atu2424 2396994 - 2396266 - | ABC transporter, nucleotide binding/ATPase protein TERM 2856 2396886 - 2396902 + g 72 -2.2 -4.74103 | overlap 2396854 2396853 CATTGGCACCGATCA GGCTGA CGATT TCACCC TTTTTGACTTCGACA Atu2425 2397884 - 2396994 - | ABC transporter, nucleotide binding/ATPase protein TERM 2857 2397570 - 2397582 + g 74 -3.3 -4.79223 | overlap 2397571 GTTCTGGAAGGTGCG CGCCA CCT TGGCC TTTTTGGTAATCTCG TERM 2858 2397603 - 2397633 + g 84 -9.8 -4.2558 | gap 2, opp_overlap 2397602 2397601 GGTAATCTCGAAATC CGGC-AGGCGC-TC GAGAA GATGCGCCTCGCCG TTTTGCTGACGCATG Atu2426 2399281 - 2397884 - | ABC transporter, membrane spanning protein (branched chain amino acid) TERM 2859 2399086 - 2399072 - G 74 -7 -4.35885 | ACCGACCACAAGAAA GCGGCC AAC GGCGGC AACGGCGACGAAGAT livH 2400188 - 2399286 - | ABC transporter, membrane spanning protein TERM 2860 2399642 - 2399682 + g 90 -15.3 -3.64487 | opp_overlap 2399619, overlap 2399645 GGGCGGCCATCTTGC GGTCCTGCTCGGTGGCGCG CTG CGCCCGGCCGAGCGGGGTC TTGTTGACGATATAC TERM 2861 2399645 - 2399679 + g 78 -15.6 -2.63549 | overlap 2399642 CGGCCATCTTGCGGT CCTGCTCGGTGGCGCG CTG CGCCCGGCCGAGCGGG GTCTTGTTGACGATA TERM 2862 2400079 - 2400067 - G 71 -9.1 -3.77927 | opp_overlap 2400066 2400065, overlap 2400065 CCAAGCATGAAAATA TCGCC ATG GGCGA AGTTGATCATGCCGA TERM 2863 2400504 - 2400492 - g 71 -6.9 -4.24404 | overlap 2400493 ATCGAAATGGCAAAA CCCCG TTA CGGGA TGCCCCCGTTGCCGG pssB 2400483 - 2401325 + | exopolysaccharide production protein PssB TERM 2864 2402336 - 2402305 - g 87 -17.2 -3.12351 | GGTCTCGATACCCAA CCGCCCGCTTGCCG TCGC CGGCCAGCCGGCGG GCACCACGAAACCCG TERM 2865 2402376 - 2402400 + G 75 -7.7 -4.20696 | overlap 2402389 CTGCCGCCGGTTTTT CCGTGCTCGTC ATC GCCGAGGGCGG TTTTGCGCTTGGTGA Atu8178 2401667 - 2402704 + | hypothetical protein TERM 2866 2402738 - 2402748 + F 74 -2.6 -5.00616 | overlap 2402737 GAGAAAAATTGCGAT TTTT GGA AAAA TTTTTTCCCGGCAAA Atu2430 2402896 - 2403171 + | hypothetical protein TERM 2867 2403211 - 2403244 + F 100 -20.5 -4.08919 | gap 1, opp_overlap 2403217 2403218, overlap 2403218 GCCCAAACCGAACGT CCAAAACGCCCCGTCG TAT CGACGGGGC-TTTTGG TTTGATTTCGGATTT TERM 2868 2403239 - 2403217 - f 100 -14.8 -4.1466 | opp_overlap 2403211 2403218, overlap 2403218 ACCGAACGTCCAAAA CGCCCCGTCG TAT CGACGGGGCT TTTGGTTTGATTTCG TERM 2869 2403218 - 2403238 + F 100 -18.3 -4.64464 | opp_overlap 2403217 2403218, overlap 2403211 CCGAACGTCCAAAAC GCCCCGTCG TAT CGACGGGGC TTTTGGTTTGATTTC TERM 2870 2403238 - 2403218 - f 100 -18.3 -3.08314 | opp_overlap 2403218 2403211, overlap 2403217 CCGAACGTCCAAAAC GCCCCGTCG TAT CGACGGGGC TTTTGGTTTGATTTC TERM 2871 2403283 - 2403299 + F 90 -12.3 -4.05033 | opp_overlap 2403282 ATTTGCCCGACACAG CCGGTGA CTG TCACCGG TTTGTGTCCACTGCG Atu2431 2403393 - 2403674 + | hypothetical protein Atu2432 2404082 - 2403813 - | hypothetical protein TERM 2872 2404202 - 2404182 - H 100 -15.4 -4.74103 | opp_overlap 2404182 GCGGCAAGGCAAAAA GGCCGCCC TTGCG GGGCGGCC TTTTTAGAAAAAATG TERM 2873 2404182 - 2404202 + H 100 -16.1 -4.57073 | opp_overlap 2404182 GCGGCAAGGCAAAAA GGCCGCCCT TGC GGGGCGGCC TTTTTAGAAAAAATG TERM 2874 2404704 - 2404694 - g 85 -6.8 -4.72986 | GACCCGGATCAAAAA GGCA CTA TGCC CCCTGATCGGCCCGT Atu2433 2404215 - 2404811 + | hypothetical protein ctrA 2405136 - 2405840 + | two component response regulator TERM 2875 2405865 - 2405896 + F 95 -14.6 -3.4934 | opp_overlap 2405870 2405872, overlap 2405872 GTACAGGACAGTTTT TAAAAGACCCGCTG GCGA CAGCGGGTTTTTTG TTGCTCTTTCCTATA TERM 2876 2405891 - 2405870 - f 83 -10.1 -4.10657 | opp_overlap 2405865 2405872, overlap 2405872 GGACAGTTTTTAAAA GACCCGCTG GCGA CAGCGGGTT TTTTGTTGCTCTTTC TERM 2877 2405872 - 2405889 + F 100 -12.7 -5.54885 | opp_overlap 2405872 2405870, overlap 2405865 ACAGTTTTTAAAAGA CCCGCTG GCGA CAGCGGG TTTTTTGTTGCTCTT TERM 2878 2405889 - 2405872 - f 86 -12.7 -3.64984 | opp_overlap 2405865 2405872, overlap 2405870 ACAGTTTTTAAAAGA CCCGCTG GCGA CAGCGGG TTTTTTGTTGCTCTT TERM 2879 2406399 - 2406383 - g 82 -9.4 -4.3208 | opp_overlap 2406383 CCGCAGAATCGAAAA TCGGCG GCCGT CGCCGA ACGAATCGGCGGCAC Atu2435 2405972 - 2406487 + | acetyltranferase Atu2436 2407454 - 2406537 - | hypothetical protein TERM 2880 2406910 - 2406865 - G 93 -11 -4.36914 | overlap 2406896 GTCTCCGGCAGAAAA CCGGCAGCCGGGCCGAGATC CAGCGC AATCACGGCGCGGATGCGGG CATCGCGCCAATCCA TERM 2881 2407531 - 2407511 - R 76 -12.6 -2.71712 | overlap 2407510 CCGTCTGTTTGAAAC CGATGGCG CCGTC CGCCATCG CGGCACGAAGGGTGG Atu2437 2408223 - 2407696 - | hypothetical protein TERM 2882 2408280 - 2408244 - R 78 -6.7 -4.64861 | gap 3, overlap 2408247 TGCTCCCAAAACAAA GA-AGACCGG--CGCGTC GGTG GACGCGATCCGGCCTCTC ACAAATTCACATCGG TERM 2883 2408276 - 2408247 - R 83 -8.6 -4.43397 | gap 2, overlap 2408244 TCCCAAAACAAAGAA GACCGG--CGCGTC GGTG GACGCGATCCGGCC TCTCACAAATTCACA Atu2438 2408954 - 2408307 - | hypothetical protein Atu2439 2409211 - 2409801 + | hypothetical protein TERM 2884 2410342 - 2410315 - g 95 -7 -5.42259 | gap 1, overlap 2410317 2410339 CGAGCGGGAAAAAAA CACCTCGCT-GCG CCT CGCCAACGAGGCA GCGTCCAGCGACGCC TERM 2885 2410340 - 2410317 - g 82 -9.6 -4.35085 | gap 1, overlap 2410315 2410339 AGCGGGAAAAAAACA CCTCGCT-GCG CCT CGCCAACGAGG CAGCGTCCAGCGACG TERM 2886 2410790 - 2410777 - g 73 -4.5 -4.59773 | GCTGATGGCGAAAAA TGCCG ATCT CGACA CGATGCTGACCCTGC TERM 2887 2410922 - 2410910 - g 74 -6.2 -4.56597 | GTGCCGGTGGAAAAA GCGG TTAAT CCGC CGCAACCGGCAGCGC Atu2440 2410082 - 2411317 + | hypothetical protein Atu2441 2412296 - 2411598 - | RNA methylase Atu2442 2412834 - 2412442 - | hypothetical protein rluD 2412873 - 2413895 + | ribosomal large subunit pseudouridine synthase D TERM 2888 2413917 - 2413899 - f 83 -9.6 -4.13767 | opp_overlap 2413901 2413903 2413905, overlap 2413900 CTGCGCAGCTGAAAA CTTGGCTG GCG CAGCCAAA AAACTGCGCCATGCA Atu2444 2414180 - 2415004 + | hypothetical protein rpoH 2415172 - 2416074 + | RNA polymerase factor sigma-32 TERM 2889 2416135 - 2416115 - T 76 -12.5 -2.80016 | opp_overlap 2416115, overlap 2416112 GCTGACCATGAATCA TCCTCGGCC TTC GGCCGGGGA TTTTTGTTTGTAAAA TERM 2890 2416115 - 2416135 + T 100 -14.7 -5.38054 | opp_overlap 2416115 2416112 GCTGACCATGAATCA TCCTCGGCC TTC GGCCGGGGA TTTTTGTTTGTAAAA TERM 2891 2416518 - 2416501 - T 100 -14.1 -4.77165 | TGCCTTATAACAAAA GGGCGGC CTGA GCCGCCC TTAAACCATCACTGA Atu2446 2418863 - 2416527 - | hypothetical protein purA 2420226 - 2418928 - | adenylosuccinate synthetase TERM 2892 2419319 - 2419294 - G 76 -13.3 -3.05596 | gap 1, opp_overlap 2419282 CAGTGCCGCATCGAA CCAGCCGC-AGC GGC GCTTGCGGCCGG TGACGGTGCCGAATT TERM 2893 2421019 - 2421031 + G 76 -6.2 -4.63542 | CTGGCGCACGCTGAT GGCG ATCCC CGCC TTTTTCGCCCTTCTC Atu2448 2420447 - 2421355 + | hypothetical protein TERM 2894 2421382 - 2421341 - T 100 -11.6 -5.63103 | gap 1, overlap 2421342 GCCGAACGAAAAAAA TCGCCGGC-TTCCTGAACC AACGA GGATCAGGAAAACCGGCGC AGTCTGGCAGGCATG TERM 2895 2421381 - 2421342 - T 100 -15.1 -3.96777 | gap 1, overlap 2421341 CCGAACGAAAAAAAT CGCCGGC-TTCCTGAACC AACGA GGATCAGGAAAACCGGCG CAGTCTGGCAGGCAT Atu2449 2421982 - 2421449 - | hypothetical protein Atu2450 2422307 - 2421984 - | hypothetical protein Atu2451 2422658 - 2423242 + | hypothetical protein Atu2452 2423915 - 2423301 - | hypothetical protein TERM 2896 2423632 - 2423611 - G 89 -10.1 -4.56597 | gap 1 GCGCCGTTCGAAAAA CCGAGGCCGA TCA CCGGCC-CGG CCTGATAATGCTCGC TERM 2897 2423873 - 2423861 - G 89 -10.5 -4.51174 | opp_overlap 2423868 2423869 GCAGCAGAACGAAAA GCGGG GCG CCCGC AACGCCGGCGCGGGA TERM 2898 2423994 - 2424010 + r 71 -5.8 -4.31433 | overlap 2423990 AGCAATTTCATGGAG CGAGCG AGCGC CGCTTG TTTCTTCTCCCCGTC Atu2453 2425102 - 2424158 - | aromatic compounds dioxygenase TERM 2899 2424327 - 2424310 - G 72 -12.7 -3.04144 | overlap 2424283 TGGCCACCTCGAACA GCACGCC GCCC GGCGTGC GGAAATAGATCGCCC TERM 2900 2425047 - 2425034 - G 70 -3.8 -4.58395 | CGTATCGGTGAAAAA GCCA TTGTTC TGGC GCGCACTGGCTGCCA TERM 2901 2425255 - 2425236 - R 75 -3.5 -4.91084 | overlap 2425237 CAGTGAACAATAAAA TCGACTG TTCAAC CAGTCGC GCAGACCATTCTAGT Atu2454 2426342 - 2425266 - | iron-chelator utilization protein Atu2455 2427126 - 2426413 - | uracil-DNA glycosylase TERM 2902 2426657 - 2426685 + g 74 -6 -4.57073 | gap 1 TGGTCACATTCGTCG TTCA-CGGCGCGG ATGA CCGCATCGGTGAA TTTTTCCCAGCCCTG lguL 2427540 - 2427145 - | lactoylglutathione lyase TERM 2903 2427829 - 2427850 + G 84 -10.1 -4.24711 | gap 1, overlap 2427827 TGGCTGGCTGATGGT CGCGACCGGC ATT GTCGG-CGCG TTTCTTCCCGTTTTG Atu2457 2427791 - 2428147 + | hypothetical protein hmuV 2429002 - 2428220 - | ABC transporter, nucleotide binding/ATPase protein (hemin) hmuU 2430087 - 2428999 - | ABC transporter, membrane spanning protein (hemin) TERM 2904 2429657 - 2429647 - G 70 -4.6 -4.57073 | overlap 2429648 CAGCCCGCCGAAAAA CGCC ATC AGCG GCAGGAAATGCGGGC TERM 2905 2429692 - 2429680 - G 76 -6.9 -4.56775 | ATGCGGGCCGAAAAA CACGG CAA CCGCG GCAAGCGAGCCTTCC TERM 2906 2429951 - 2429934 - G 72 -2 -4.72846 | gap 1, overlap 2429936 2429943 2429944 TGAGATAGGCAAAAA GT-TCGG AAACG CCGACAC CGGTGGGCCCGCTGA hmuT 2430977 - 2430084 - | ABC transporter, substrate binding protein (hemin) TERM 2907 2431498 - 2431481 - g 76 -9.9 -3.71998 | opp_overlap 2431484, overlap 2431484 CATCCATGAAGACAA GAATGGC GAAC GCCATTC GATTGCCGCCTGAGG Atu2461 2431164 - 2431511 + | hypothetical protein Atu2462 2431522 - 2432046 + | hypothetical protein Atu2463 2432273 - 2433049 + | hypothetical protein purU 2433262 - 2434146 + | formyltetrahydrofolate deformylase TERM 2908 2434186 - 2434162 - T 72 -12.1 -2.79133 | opp_overlap 2434154 2434153, overlap 2434165 TAAGGTGGCAGCAGA CAAGGCTGCCT GAT AGGCCGCCCTG CTATGCCGCTCTTTC TERM 2909 2434183 - 2434165 - T 74 -10.2 -3.54475 | opp_overlap 2434154 2434153, overlap 2434162 GGTGGCAGCAGACAA GGCTGCCT GAT AGGCCGCC CTGCTATGCCGCTCT Atu2465 2435581 - 2434187 - | two component sensor kinase Atu2466 2436258 - 2435578 - | two component response regulator Atu2467 2436327 - 2437406 + | ABC transporter, substrate binding protein (iron) TERM 2910 2437791 - 2437772 - f 82 -5.6 -5.04601 | opp_overlap 2437787 2437789, overlap 2437773 CGCATAAACGAAAAA CGACGCCC AAAA GGGCATCC TGAGGAGGGTTTTCC TERM 2911 2437790 - 2437773 - f 70 -9.1 -3.61676 | opp_overlap 2437787 2437789, overlap 2437772 GCATAAACGAAAAAC GACGCCC AAAA GGGCATC CTGAGGAGGGTTTTC Atu2469 2437809 - 2438753 + | hypothetical protein TERM 2912 2438807 - 2438785 - g 100 -17.7 -4.33274 | opp_overlap 2438775 2438800 TCTAGAGCATCAAAA GCGCCGCCC TGACT GGGCGGCGC TGGCGATCGCCGTCT Atu2470 2438750 - 2439244 + | hypothetical protein Atu2471 2439351 - 2440868 + | hypothetical protein TERM 2913 2440922 - 2440893 - T 78 -12.1 -3.17571 | opp_overlap 2440895 AACCTCCCAAGGCAA CTGGCCCCGTATC TCCG GATACGGGGCCTT TTTTTGTTCACGCCA TERM 2914 2440895 - 2440920 + T 100 -19.1 -5.7946 | opp_overlap 2440893 CCTCCCAAGGCAACT GGCCCCGTATC TCCG GATACGGGGCC TTTTTTTGTTCACGC Atu2472 2441274 - 2440930 - | hypothetical protein TERM 2915 2442308 - 2442286 - g 89 -7 -5.06414 | TGCCTGGAAGAAAAA GCAGATCG TCTATCT CGATCCGC AGGCAGCCTATATCG Atu2473 2441459 - 2442397 + | ABC transporter, substrate binding protein Atu2474 2442536 - 2443564 + | ABC transporter, membrane spanning protein Atu2475 2443557 - 2444525 + | ABC transporter, membrane spanning protein Atu2476 2444522 - 2445280 + | ABC transporter, nucleotide binding/ATPase protein dps 2445403 - 2445891 + | DNA starvation/stationary phase protection protein Dps TERM 2916 2445927 - 2445947 + F 100 -14.7 -5.14965 | opp_overlap 2445927 GCTCAACACAGCAAA GCGCCCGAG AGA TTCGGGCGC TTTTTTCGTAGAGAT TERM 2917 2445947 - 2445927 - f 100 -14 -3.93262 | opp_overlap 2445927 GCTCAACACAGCAAA GCGCCCGA GAGAT TCGGGCGC TTTTTTCGTAGAGAT Atu2478 2445961 - 2446209 + | hypothetical protein Atu2480 2447608 - 2446709 - | LysR family transcriptional regulator TERM 2918 2447596 - 2447584 - G 76 -6.9 -4.57569 | overlap 2447557 2447556 2447585 CGACCCGCGTAAAAA CCCGC ATG GCGGA GAGCTGATCCATTCA Atu2481 2447755 - 2448561 + | lipase esterase TERM 2919 2449419 - 2449390 - g 70 -10.7 -3.53563 | overlap 2449410 2449414 AGATCCCGGTGGAAA TCGGCACGCTTTC GGAT GAAGGCACGCCGA TCAAGGGCACGCTGC mexE 2448618 - 2449808 + | HlyD family secretion protein TERM 2920 2449810 - 2449790 - f 74 -9.7 -3.66784 | CCAGGCGGAAGACAA GGTTGCTGC TTC GCAGTAACC CACCTCTTTGATCAG TERM 2921 2449852 - 2449829 - f 78 -12.4 -3.21099 | CTCTTTGATCAGTAA GCGTCCCGCA GTAT CGCGAGACGC GCATTCACACAGAAC TERM 2922 2451017 - 2450965 - g 71 -6.7 -4.18018 | opp_overlap 2450968 2450971 2450980, overlap 2450978 CTCCTCCATCGAAAA GGTTGTCGATACACTCCTCGAGGCC GTT GGCCTCGTGGTGCTTGTCGTCATTC TCTTTCTCCAGACCT TERM 2923 2450968 - 2451014 + G 82 -11.4 -3.89695 | opp_overlap 2450965 2450978, overlap 2450971 2450980 CTCCATCGAAAAGGT TGTCGATACACTCCTCGAGGCC GTT GGCCTCGTGGTGCTTGTCGTCA TTCTCTTTCTCCAGA TERM 2924 2451004 - 2450978 - g 75 -13.6 -2.87463 | opp_overlap 2450971 2450968 2450980, overlap 2450965 AAGGTTGTCGATACA CTCCTCGAGGCC GTT GGCCTCGTGGTG CTTGTCGTCATTCTC TERM 2925 2450980 - 2451002 + G 79 -14.8 -2.87957 | opp_overlap 2450978 2450965, overlap 2450971 2450968 GGTTGTCGATACACT CCTCGAGGCC GTT GGCCTCGTGG TGCTTGTCGTCATTC TERM 2926 2453130 - 2453096 - g 76 -10.6 -3.78793 | overlap 2453125 CACAAGCAGGAAGAA CCGGCCAATTCGGACT ACA AGCTCGAAAAGGCCGG CTGACGCCGCACCCC mexF 2449940 - 2453134 + | AcrB/AcrD/AcrF family protein TERM 2927 2453172 - 2453197 + F 100 -20.5 -4.7497 | opp_overlap 2453169 CCTTCGACGCAAGCC CGCCGCGCATC ATCA GATGCGCGGCG TTTTTCATGGCTGGA Atu2484 2453426 - 2453620 + | hypothetical protein Atu2485 2454499 - 2453654 - | hypothetical protein TERM 2928 2453842 - 2453814 - G 79 -9.6 -4.18197 | gap 1, overlap 2453815 AGGTTGGACGGAAAA CTCGGCACCGCCG GCGG CAG-GGTGCCGAA AGCGTCCCGGAACGT TERM 2929 2454455 - 2454465 + g 83 -2.4 -5.1861 | CAGGCTGGTGTTTTT CGTC AAA GCCG TTTTTTCATCATCCA cls 2456009 - 2454549 - | cardiolipin synthase TERM 2930 2455225 - 2455198 - G 83 -2 -5.28176 | gap 1 GCGATGGAGAAAAAA TCGGAGACCACCG GCC CGGTAATCTT-GA AATGGGTGTCGTGCG TERM 2931 2456280 - 2456299 + G 76 -6.3 -4.62069 | overlap 2456273 2456275 CGTCATGCGTGGCTC CGTCGGC AACCGC GCCGCCG TTTTTGCGCTGGAGA pdxK 2456221 - 2457096 + | pyridoxamine kinase TERM 2932 2457407 - 2457457 + G 70 -4.7 -4.56133 | overlap 2457410 TGTTCATTGCCTGTT GTGACTCCCGTTCGGC-GCCGGAAA CCA TTTTCGACTGCGGACCGGGAGA-AC TTTTCGTTGTTCGCA TERM 2933 2457906 - 2457887 - g 100 -12.8 -4.3586 | opp_overlap 2457885 TGATGGACAGCAAAA CGGGCGAC TTTC GCCGCCCG GATCTGTGAAAACAG cah 2457274 - 2457915 + | carbonate dehydratase Atu2489 2458764 - 2457949 - | hypothetical protein TERM 2934 2458913 - 2458894 - R 73 -6.4 -4.41616 | overlap 2458880 2458895 AGGCCTGCAAATAAA CTGGCCGT GATG ACAGCCAA TTGAAAAACCCGCCT TERM 2935 2458949 - 2458922 - R 95 -9.8 -4.75174 | opp_overlap 2458922 CAGCCAATTGAAAAA CCCGCCTGCCCC ACAC AGAACAGACGGG TTATACTTAACGAAC asd 2460013 - 2458979 - | aspartate-semialdehyde dehydrogenase Atu2491 2460399 - 2460016 - | hypothetical protein mtbA 2460562 - 2462406 + | MFS permease TERM 2936 2462452 - 2462427 - f 83 -10.3 -3.9281 | opp_overlap 2462430, overlap 2462430 AGCACCCCCAAACAA CCACCCGGCGC CATG GCGCCGGGTTT TTTATTGCCGCCGTA TERM 2937 2462430 - 2462449 + F 100 -16.4 -5.4505 | opp_overlap 2462427 2462430 ACCCCCAAACAACCA CCCGGCGC CATG GCGCCGGG TTTTTTATTGCCGCC TERM 2938 2462449 - 2462430 - f 100 -16.4 -3.02639 | opp_overlap 2462430, overlap 2462427 ACCCCCAAACAACCA CCCGGCGC CATG GCGCCGGG TTTTTTATTGCCGCC TERM 2939 2462558 - 2462544 - f 79 -2.7 -5.21506 | overlap 2462545 ATAACAAGACAAAAA CGCCC CAAAT GGGCT ATGACGGCTTATCAG TERM 2940 2462705 - 2462726 + G 84 -9.4 -4.56597 | gap 1, opp_overlap 2462703 2462722 ATTGCGTGATAGAGG CCGGC-GCC GGCAA GGCAGCCGG TTTTTCCGACGACGC pntA 2462596 - 2464170 + | NAD(P) transhydrogenase subunit alpha pntB 2464191 - 2465636 + | NAD(P)+ transhydrogenase beta chain TERM 2941 2465643 - 2465670 + T 100 -13.4 -4.7373 | opp_overlap 2465644, overlap 2465644 ATCAAGTAATGAGAA AGGCGTTTCCGG GAAA CCGGGAACGCCC TTTTTACTGACGTGA TERM 2942 2465669 - 2465644 - T 100 -14.7 -4.10331 | opp_overlap 2465643 2465644 TCAAGTAATGAGAAA GGCGTTTCCGG GAAA CCGGGAACGCC CTTTTTACTGACGTG TERM 2943 2465644 - 2465669 + T 100 -16.9 -3.43756 | opp_overlap 2465644, overlap 2465643 TCAAGTAATGAGAAA GGCGTTTCCGG GAAA CCGGGAACGCC CTTTTTACTGACGTG TERM 2944 2465705 - 2465725 + T 79 -12.6 -2.88544 | AAACCTCCACCGTCA TCCTCGGG CTTGT CCCGAGGA TCTATCCACGTCGAA Atu2495 2466367 - 2465843 - | flavoprotein oxidoreductase TERM 2945 2466026 - 2465980 - G 70 -4.3 -4.44046 | gap 1, overlap 2465998 GGCAGTCGAAAGAAA CCAGTGCGTCTTCCAGAACCGG AGCG CCGGT-CTCGAGCACGCCCCAG CTGCCGGCGGCGAAA Atu2496 2466999 - 2466409 - | hypothetical protein Atu2497 2467805 - 2467020 - | hydrolase Atu2498 2468208 - 2467822 - | hypothetical protein Atu2499 2468975 - 2468235 - | isochorismatase TERM 2946 2468746 - 2468760 + g 75 -2.7 -4.87626 | opp_overlap 2468727 2468724 ACGCCCGCCGCCCGC GCCGC ATCCA GCGTC TTTTTGATGTTGGCA TERM 2947 2468903 - 2468935 + g 93 -15.5 -3.62418 | GGGTAATCGGCTCCG GCCTCGCGGGAAGCG TCA CGCTTTCCGAGCGGC TTTCAGGTCCCTTAT rutA 2470063 - 2468972 - | monooxygenase (pyrimidine utilization protein A) TERM 2948 2469442 - 2469417 - G 76 -8.9 -4.07568 | opp_overlap 2469416 TTGGTGGGCGCAAAA GCCTTCGGCGT ATTG ACGCCGACGCC GAAGCAGAAGCTGTA TERM 2949 2470167 - 2470143 - R 74 -3 -4.97158 | opp_overlap 2470146, overlap 2470138 2470146 CCAGACCAAATAAAA TAATTTTATC AAATG GATAAAATTT TGGGGCGCATCGAGC TERM 2950 2470164 - 2470146 - R 71 -4.7 -4.56436 | opp_overlap 2470146, overlap 2470138 2470143 GACCAAATAAAATAA TTTTATC AAATG GATAAAA TTTTGGGGCGCATCG TERM 2951 2470208 - 2470194 - R 71 -5.8 -4.2558 | opp_overlap 2470193 2470183 2470182, overlap 2470201 GAGCCTTTACCAAAA GATAAA ATT TTTATC ATTTGGTAAAAATAT TERM 2952 2470220 - 2470201 - R 72 -2.2 -4.91977 | opp_overlap 2470193 2470183 2470182 2470213, overlap 2470194 TACCAAAAGATAAAA TTTTTATC ATTT GGTAAAAA TATTTGCCTGTTTAT hemO 2471077 - 2470466 - | heme oxygenase TERM 2953 2470903 - 2470888 - G 83 -4.7 -5.09259 | CATTGGAAAAGAAAA CATCG AGATCG CGATG GAAAAGATATTGCGT dapA 2471384 - 2472268 + | dihydrodipicolinate synthase Atu2504 2472289 - 2472945 + | GntR family transcriptional regulator Atu2505 2473048 - 2474379 + | ABC transporter, substrate binding protein (sugar) TERM 2954 2474456 - 2474430 - g 81 -13.7 -3.29511 | opp_overlap 2474419 GTCAGTCGCGCAGAA GGGAGCAGGCC GCCAA GGCTTGCTCCC AACTACTGGCCCTTC TERM 2955 2474721 - 2474731 + G 77 -8.2 -4.37092 | overlap 2474712 2474711 2474722 TTCGATGCGCAATTT CCGC TGC GCGG TTTTCTGCGCGGCGT TERM 2956 2474722 - 2474745 + G 78 -13.8 -3.17051 | overlap 2474712 2474711 2474721 TCGATGCGCAATTTC CGCTGCGCGG TTTT CTGCGCGGCG TCTTCGTGATGCCGA Atu2506 2474379 - 2475317 + | ABC transporter, membrane spanning protein (sugar) Atu2507 2475317 - 2476153 + | ABC transporter, membrane spanning protein (sugar) TERM 2957 2476166 - 2476180 + F 70 -10 -3.45571 | opp_overlap 2476166, overlap 2476160 TGAACCAACAACAAA GGGCAT TCC ATGCCC TTCCTCTTTAAACGC TERM 2958 2476180 - 2476166 - f 88 -10 -4.51994 | opp_overlap 2476166 2476160 TGAACCAACAACAAA GGGCAT TCC ATGCCC TTCCTCTTTAAACGC TERM 2959 2477079 - 2477022 - g 76 -6.9 -4.46212 | gap 2 TTCCGCACCATAAAA GGCCTCAGCCTGCCGCTGCCCGCCCAT GCCGAT ATCGGCAAGCT-CGGC-GGCCGCGACC TCGTCTATGGCGTAC Atu2508 2476257 - 2477315 + | ABC transporter, nucleotide binding/ATPase protein (sugar) TERM 2960 2477722 - 2477711 - g 85 -3.6 -5.31275 | overlap 2477712 CTTCACGAGAAAAAA CGCG CCTG CACG CCGGAGGATATTGCT Atu2509 2477336 - 2478295 + | sugar kinase TERM 2961 2478930 - 2478906 - g 74 -5.5 -4.56775 | opp_overlap 2478906 2478925, overlap 2478892 2478908 AGCCGCGCTCAAAAA CGCTGCCACAG GTC CGGTGGCCGAG GGCGGCGTTGGTGCT Atu2510 2478439 - 2479497 + | aminopeptidase TERM 2962 2480035 - 2480003 - g 76 -9.7 -4.14243 | CAGGTCATGGCAAAA CGCATCGCCAAGGCC GAA GGCTGTGACGAAGCG TGGATGATCGAAGAT TERM 2963 2480227 - 2480204 - g 73 -10.3 -3.62597 | overlap 2480224 TTCACGCTGGAAGAA CGCCCCTTC ACGCTG GAAGAGGCG CTGAAGGCCGACGAA dat 2479517 - 2480383 + | D-amino acid aminotransferase Atu2512 2481370 - 2480450 - | LysR family transcriptional regulator TERM 2964 2480719 - 2480734 + g 72 -2.5 -4.77036 | gap 1, opp_overlap 2480706 GATCGCGCAGCAGCG GCC-CG AAGAA CGAGGC TTTTTCATAATCCAG Atu2513 2482942 - 2481431 - | penicillin binding protein TERM 2965 2483023 - 2483041 + r 73 -5.8 -4.42062 | opp_overlap 2483023 2483024, overlap 2483024 CGGCGGGGAGAAGAA GCGAGCGG CAC CCGCCCGA TTTATTTGCGACGTA TERM 2966 2483041 - 2483023 - R 71 -8 -3.78934 | opp_overlap 2483023 2483024, overlap 2483024 CGGCGGGGAGAAGAA GCGAGCGG CAC CCGCCCGA TTTATTTGCGACGTA TERM 2967 2483040 - 2483024 - R 71 -11.5 -2.87146 | opp_overlap 2483024 2483023, overlap 2483023 GGCGGGGAGAAGAAG CGAGCGG CAC CCGCCCG ATTTATTTGCGACGT dppF 2483800 - 2483060 - | ABC transporter, nucleotide binding/ATPase protein (dipeptide) TERM 2968 2483438 - 2483464 + g 72 -2.9 -4.76312 | overlap 2483440 CGCCTGCGGCAGGGC CACATCCGACA AGGCC TGCTGGATGCG TTTTTCGATATTGTC dppD 2484627 - 2483797 - | ABC transporter, nucleotide binding/ATPase protein (dipeptide) dppC 2485533 - 2484631 - | ABC transporter, membrane spanning protein (dipeptide) dppB 2486549 - 2485530 - | ABC transporter, membrane spanning protein (dipeptide) TERM 2969 2486510 - 2486482 - G 91 -13.9 -3.80573 | opp_overlap 2486474 GTGATGATCATCAAA CCGAACAGCGTCA GGA TGACGCTGCCCAG TATCGACGATATGCT dppA 2488141 - 2486546 - | ABC transporter, substrate binding protein (dipeptide) Atu2519 2488378 - 2489418 + | dipeptidase TERM 2970 2489466 - 2489491 + T 100 -11.1 -5.45652 | gap 1, opp_overlap 2489424 2489422 2489420 2489466 CGCCGGAGACAGGAA GCGG-CGGGGCC TCA GGCCTTGGCCGC TTTTTTCTTGCCCGT Atu8179 2489770 - 2489477 - | hypothetical protein TERM 2971 2491102 - 2491116 + G 89 -6.4 -5.02074 | CCTTCGCCATCATTC TCGGCA CCA TGCTGA TTTTTTCGAGCGTGA lpiA 2490048 - 2492648 + | protein regulated by acid pH TERM 2972 2492890 - 2492867 - g 74 -5.8 -4.56597 | overlap 2492869 GCGCTTGTCGAAAAA GGCGCCGCCG TCGT CGGCATCGAC TTCAAGGAATATCTG acvB 2492645 - 2494015 + | chromosomal virulence protein B TERM 2973 2494156 - 2494118 - f 86 -7.6 -4.6951 | gap 2, opp_overlap 2494119, overlap 2494119 ATTATTCAAAAGAAA CCGGCTTGCGGCGAATGT TCATC ACATTC-CCGCAA-CCGT TCTGTCGTTGATCGC TERM 2974 2494119 - 2494155 + F 77 -11.1 -3.61404 | gap 2, opp_overlap 2494118 2494119 TTATTCAAAAGAAAC CGGCTTGCGGCGAATGT TCATC ACATTC-CCGCAA-CCG TTCTGTCGTTGATCG TERM 2975 2494155 - 2494119 - f 75 -11.1 -3.40622 | gap 2, opp_overlap 2494119, overlap 2494118 TTATTCAAAAGAAAC CGGCTTGCGGCGAATGT TCATC ACATTC-CCGCAA-CCG TTCTGTCGTTGATCG TERM 2976 2494594 - 2494563 - g 89 -6.4 -5.02074 | gap 1, overlap 2494564 2494567 2494584 CGATTGTCGAAAAAA TCGAGCGGGCGGAGT TCA ACACCGCCGGC-CGC AAACCCACGGTTCTC TERM 2977 2494593 - 2494564 - g 73 -9.9 -3.60762 | gap 1, overlap 2494563 2494567 2494584 GATTGTCGAAAAAAT CGAGCGGGCGGAGT TCA ACACCGCCGGC-CG CAAACCCACGGTTCT telA 2494217 - 2495545 + | protelomerase TERM 2978 2496263 - 2496232 - g 79 -12.2 -3.43751 | opp_overlap 2496236, overlap 2496230 2496235 TAACAAGCTGAAAGA CACCCGCTACCGCG ACTT CGCGGCAGCGTTTG ATTTCGGTACGATCA TERM 2979 2496236 - 2496259 + G 95 -13.8 -4.08485 | opp_overlap 2496235 2496232 2496230 AAGCTGAAAGACACC CGCTACCGCG ACTT CGCGGCAGCG TTTGATTTCGGTACG TERM 2980 2496313 - 2496291 - g 89 -4.8 -5.1615 | overlap 2496282 2496293 TCAAGACTGAAAAAA CGGTTCAGAC CAA GTCTCAACAG GACCGGCTGGTTACC TERM 2981 2496843 - 2496861 + G 78 -3 -5.14563 | opp_overlap 2496824, overlap 2496827 2496831 2496844 GCGTCACGCAGACCG GCGCGATT CTA AACCGCGA TTTTTTCGTGCAGGC TERM 2982 2497022 - 2496984 - g 76 -7.5 -4.4767 | gap 2, overlap 2496985 2496988 GTACCGATCAGAAAA TCCAGTGGGCTCTTCGGGA AAA CCCCGCAGA-CCCAC-AGA GCGGACTTTATAGGG Atu2524 2495951 - 2498275 + | hypothetical protein TERM 2983 2498318 - 2498355 + T 95 -14.1 -3.21395 | overlap 2498316 2498319 CTGCCGCATTAGGTT TGCGATGGCCGCAGGTT CACG ATCCTGCGGCCATAGCC TGTTATCAAACCCGT TERM 2984 2498319 - 2498354 + T 90 -17.6 -2.52623 | overlap 2498318 2498316 TGCCGCATTAGGTTT GCGATGGCCGCAGGTT CACG ATCCTGCGGCCATAGC CTGTTATCAAACCCG Atu2525 2499710 - 2498361 - | MFS permease TERM 2985 2499833 - 2499803 - R 70 -7 -4.13995 | opp_overlap 2499803 2499805 TCGCCATAAATTAAA TGTTGCATTTGCAA AAA TTGCAAATGAAATA TTGATAGAAGCCAAT Atu2526 2500206 - 2499868 - | YciI-like protein Atu2527 2501090 - 2500203 - | dioxygenase TERM 2986 2500633 - 2500655 + g 72 -12.6 -3.1247 | opp_overlap 2500632 2500631 TGCCAGACATCAATC CGTGCGCCGG CGA CCGGCGCGCC TTCGGTATCGAGAAT macA 2502158 - 2501103 - | maleylacetate reductase TERM 2987 2501143 - 2501155 + g 89 -6.9 -5.08824 | overlap 2501144 GCGCGCTGCAGCAGG TCGCG GAT CGCGG TTTTTTCAATCGGCC Atu2529 2503145 - 2502162 - | hypothetical protein Atu2530 2504421 - 2503192 - | oxidoreductase actI 2504998 - 2504459 - | actinorhodin polyketide dimerase TERM 2988 2505042 - 2505059 + H 77 -4.9 -4.86773 | overlap 2505029 TATTTTCATTTGCAA CATTTGT CAAT GCAAATG TTTTTCGTCATTTTA TERM 2989 2505253 - 2505270 + G 73 -4.8 -4.66163 | GCTCAACTGGGTGGG CGTTCG GCTGGG CGAGCG TTTTTCCGTGAGGCT TERM 2990 2505572 - 2505549 - g 85 -6 -5.02074 | gap 1 CCATGTTCGAAAAAA CCGCGATCGAA GGC CTCGACC-CGG GCGAGGTGAAGCTTT Atu2532 2505203 - 2505634 + | MarR family transcriptional regulator Atu2533 2505709 - 2506158 + | hypothetical protein TERM 2991 2506221 - 2506251 + T 100 -18.4 -5.1925 | CGCTACGCGCCGTTC TACCGCCGCTTCCA CGC TGAAAGCGGCGGTA TTTTTTGAATTCTCC Atu2534 2506922 - 2506293 - | outer membrane protein TERM 2992 2506646 - 2506686 + g 76 -12.5 -3.29144 | opp_overlap 2506644 TTCCGAGATAGGAGC CTTCCACTTCCGCACCGAC GAC GCCGGAGCCGAACTGGAAG TTATAGCCCGCCTGA Atu2535 2508598 - 2507162 - | two component sensor kinase Atu2536 2509236 - 2508595 - | two component response regulator TERM 2993 2509023 - 2509057 + g 73 -4.3 -4.72272 | gap 1 CACGGTGATCGACAT TTCCGAGCGCGGTC AGAACAAG GATCG-GCACGGAA TTTTTGCTGCGGCGA Atu2537 2510039 - 2509419 - | TetR family transcriptional regulator TERM 2994 2509489 - 2509455 - G 71 -6.3 -4.37092 | gap 1 ATGCCTCGCATAAAA CCGGTCGAGCTCGCGC TGCT GCGGTACCTCG-CCGG TATAGATGGCAATAT TERM 2995 2510402 - 2510344 - g 71 -8.2 -4.09685 | opp_overlap 2510356 2510366 GTGGAGCGGGCAAAA GGC-GG-TGTCGCCTTGACGATGACGGCGG GCT CCGCCGCCGTC-TCCCGG-GACAGCCCGCC CGTCTTCAACAATCT TERM 2996 2511232 - 2511208 - g 70 -4.1 -4.70266 | AAGATCATGGAAAAA CGGGAGGACGA TAT TCGCCCCTGCG TCGGTGCCAATTATT stcD 2510197 - 2512233 + | N-methylproline demethylase TERM 2997 2512243 - 2512225 - T 72 -11.8 -2.71712 | overlap 2512224 2512227 CTGCGTCTGGCAAAG GACATCTG AGA CAGATGTC GCGTCGGGAGGGCGA TERM 2998 2512316 - 2512297 - T 100 -11.4 -5.58209 | opp_overlap 2512297, overlap 2512270 GTAAACGCAAAAAAA CCCGCAGC TTGA GCTACGGG TTTTTTTGTATTTTG TERM 2999 2512297 - 2512316 + T 100 -9.2 -5.9362 | opp_overlap 2512270 2512297 GTAAACGCAAAAAAA CCCGCAGC TTGA GCTACGGG TTTTTTTGTATTTTG TERM 3000 2512409 - 2512438 + T 81 -12.9 -3.15252 | gap 1, overlap 2512403 GCTCCACCCCGCGTC CAGCG-CATTCGGC AAG GCCGAATGTCGCGG TTACGTCGTTGCTTT TERM 3001 2512440 - 2512465 + T 70 -9.7 -3.34715 | overlap 2512403 2512438 GCCGAATGTCGCGGT TACGTCGTTGC TTTA GCGACGACGGA TCTTTGCCGGAGATA TERM 3002 2512474 - 2512502 + T 89 -13.4 -3.53012 | CGACGGATCTTTGCC GGAGATAAATTG CGGCA CAATTTATCTCC TTTAAGGGGCGCACA TERM 3003 2512588 - 2512570 - T 86 -11.7 -3.8901 | opp_overlap 2512570 2512569 CCTTAAACGACGAAA GGCCGCT TGGAT AGCGGCC CTTGGTGTCGGCTGG TERM 3004 2512570 - 2512588 + T 72 -11.7 -2.55999 | opp_overlap 2512570, overlap 2512569 CCTTAAACGACGAAA GGCCGCT TGGAT AGCGGCC CTTGGTGTCGGCTGG Atu2541 2513135 - 2512878 - | hypothetical protein TERM 3005 2514107 - 2514120 + H 74 -4.5 -4.7254 | GTCGTATTGCTACTT CGCAG AGCC CTGTG TTTTTGATAAACAGT TERM 3006 2514495 - 2514511 + H 77 -8 -4.08546 | overlap 2514491 TTGGTCTTTCGGCGA GGGAGT CTCTC ACTCCC TTTATCGTTACTCAT TERM 3007 2515712 - 2515664 - H 93 -13.4 -3.81447 | gap 1, opp_overlap 2515664 GATACCTTATAATAA TGCTTGG-AAACCCAGGCCGTTC GTTA AAACAGACTGGATTTTCCAAGCA TTTAAGGTGGGTTGC Atu2543 2515743 - 2516132 + | hypothetical protein TERM 3008 2516208 - 2516198 - g 84 -3.2 -5.29445 | CTCCAACAACAAAAA TGCC TCG GACA AGCGATCCTTCCTAC Atu2544 2516197 - 2516583 + | hypothetical protein TERM 3009 2516614 - 2516584 - f 100 -16.2 -3.54653 | opp_overlap 2516593 2516611, overlap 2516587 AGCGTCAGCACATAA CCACACCAATCGCG TTC CGCGATTGGTGGAG CTGAGCGGGATCGAA TERM 3010 2516611 - 2516587 - f 100 -18.7 -2.9062 | opp_overlap 2516593, overlap 2516584 GTCAGCACATAACCA CACCAATCGCG TTC CGCGATTGGTG GAGCTGAGCGGGATC TERM 3011 2518058 - 2518078 + F 71 -9.7 -3.5594 | opp_overlap 2518057 2518054, overlap 2518075 CAGTATCAAAGGCAG TTCCGCAGT TGA GCTGCGGGA TTTCACCCCTGACTT TERM 3012 2519168 - 2519184 + F 87 -13.7 -3.28712 | AGTTTCAGTCAGATC GGGGCGT CCC ACGCCCC TTATAAAGCCAAGAA TERM 3013 2519720 - 2519706 - g 87 -10 -4.30987 | ATCGTGGAGAAGAAA CTCCTG ACG CAGGAG CAGTGGGATACGCTG purC 2519211 - 2520161 + | phosphoribosylaminoimidazole-succinocarboxamide synthase TERM 3014 2520237 - 2520264 + G 73 -9.8 -3.61398 | gap 1, overlap 2520238 CGGCGCCGGCCTCGC CGTTCCGCCGAGG AAA CC-CGGCGGGACA TTCTTGCCAAGGCCG TERM 3015 2520238 - 2520263 + G 73 -13.3 -2.76696 | gap 1, overlap 2520237 GGCGCCGGCCTCGCC GTTCCGCCGAGG AAA CC-CGGCGGGAC ATTCTTGCCAAGGCC ameR 2520165 - 2520824 + | TetR family transcriptional regulator TERM 3016 2521473 - 2521461 - g 74 -5.5 -4.43681 | GATCGAATATGAAAA CGCCA AGG TGACG CTGCTGCAGGCGCAA Atu2550 2521024 - 2522226 + | RND multidrug efflux membrane permease TERM 3017 2523476 - 2523531 + G 72 -14 -2.62184 | overlap 2523491 GTTCGCCATGGTTCT TGCGATCGGCCTTCTCGTCGATGACG CCAT CGTCGTCGTTGAAAACGTCGAGCGCA TCATGTCGGAAGAGG TERM 3018 2524200 - 2524229 + G 71 -9.3 -3.77832 | gap 1 CCCGATCAACATGCC GGTG-CCATTGTGC AGC GCGCCATGGGCACC TTCTTCGGTTTCCGC Atu2551 2522280 - 2525369 + | RND multidrug efflux transporter TERM 3019 2525393 - 2525381 - f 89 -3.3 -5.62288 | opp_overlap 2525383, overlap 2525383 TTAACAAAACAAAAA TGGGC TGT GCCAA CCGTTAATACGCTGC nodT 2525519 - 2526973 + | nodulation protein T precursor TERM 3020 2527032 - 2526988 - T 100 -13.8 -5.03715 | gap 1, opp_overlap 2526994 2527000, overlap 2526994 ACCAGCGCCAAAAAA GACA-AACAAAGAGCCCGCGT TTCG ACGCGGGCTTTTTGTTATTTC ACGTCACAAAATAAA TERM 3021 2527025 - 2526994 - T 100 -17.4 -4.64992 | opp_overlap 2526994 2527000, overlap 2526988 GCCAAAAAAGACAAA CAAAGAGCCCGCGT TTCG ACGCGGGCTTTTTG TTATTTCACGTCACA TERM 3022 2526994 - 2527025 + T 100 -19.6 -3.9392 | opp_overlap 2526994 2526988, overlap 2527000 GCCAAAAAAGACAAA CAAAGAGCCCGCGT TTCG ACGCGGGCTTTTTG TTATTTCACGTCACA TERM 3023 2527000 - 2527019 + T 100 -15 -5.38549 | opp_overlap 2526994 2526988, overlap 2526994 AAAGACAAACAAAGA GCCCGCGT TTCG ACGCGGGC TTTTTGTTATTTCAC TERM 3024 2527052 - 2527069 + T 93 -12.7 -4.05446 | opp_overlap 2527052 CACAAAATAAAAAAA GCACCGG TCGC CCGGTGC TTTGTGCTTACCCAG TERM 3025 2527069 - 2527052 - T 100 -12.7 -6.14618 | opp_overlap 2527052 CACAAAATAAAAAAA GCACCGG TCGC CCGGTGC TTTGTGCTTACCCAG chvH 2527663 - 2527094 - | elongation factor P TERM 3026 2527728 - 2527738 + H 79 -3.2 -5.24129 | overlap 2527701 GCACCGGCCCCGGCA GACG TTT TGTC TTTTTTCTGGGGCGC poxA 2527915 - 2528979 + | lysyl-tRNA synthetase kamA 2528949 - 2530040 + | L-lysine 2,3-aminomutase TERM 3027 2530084 - 2530056 - f 79 -3.1 -5.14894 | gap 1, opp_overlap 2530056 AAAAAAGCATAAAAA GCTCGCCACG CCGGGCTTTT CGCGGCG-GC TTCCCACGAAAACAA Atu2557 2530420 - 2530608 + | hypothetical protein TERM 3028 2530662 - 2530700 + T 83 -8.1 -4.39568 | gap 1, opp_overlap 2530659 TCAAAACCAAAGCGC GCCCGATATCGTATCCCG AACA CGGGGT-CGATGGCGCGC TTTTAGTGTATCAAT Atu2558 2531196 - 2530960 - | Lpr family transcriptional regulator Atu2559 2532225 - 2531299 - | LysR family transcriptional regulator TERM 3029 2533195 - 2533170 - g 71 -5.4 -4.40572 | gap 1, overlap 2533173 2533174 ACAACCTTCAGAAAA GCA-TCCTGCC CGGTC GGCAGGGCTGC TGGGATACGAAGGAA TERM 3030 2533255 - 2533292 + G 74 -12.7 -3.22298 | gap 1, overlap 2533256 CGGTCGGCTCGTCTT CGGCAGTGTCGGTG-CAC TGC GTGGCACCGGCACCGCCA TTCATCGTGCCTGGG TERM 3031 2533256 - 2533291 + G 78 -16.2 -2.53164 | gap 1, overlap 2533255 GGTCGGCTCGTCTTC GGCAGTGTCGGTG-CAC TGC GTGGCACCGGCACCGCC ATTCATCGTGCCTGG ordL 2532356 - 2533639 + | oxidoreductase modA 2533873 - 2534664 + | ABC transporter, substrate binding protein (molybdate) TERM 3032 2534705 - 2534665 - f 71 -8.3 -3.90922 | gap 1, overlap 2534666 ACCGTTTTGAAATAA GCTTGCTTCA-GGCCCGC TTTCCG GCGGGCCATGAAACATGA CGATTGCAGGATATG TERM 3033 2534704 - 2534666 - f 75 -11.8 -2.94232 | gap 1, overlap 2534665 CCGTTTTGAAATAAG CTTGCTTCA-GGCCCGC TTTCCG GCGGGCCATGAAACATG ACGATTGCAGGATAT modB 2534718 - 2535425 + | molybdate ABC transporter permease protein modC 2535422 - 2536498 + | ABC transporter, nucleotide binding/ATPase protein (molybdenum) modE 2536862 - 2536467 - | molybdenum-binding transcriptional repressor Atu2565 2537870 - 2536866 - | hypothetical protein thiG 2538732 - 2537959 - | thiazole synthase thiG 2538934 - 2538737 - | sulfur carrier protein ThiS thiO 2539905 - 2538931 - | thiamine biosynthesis oxidoreductase thiC 2541730 - 2539907 - | thiamine biosynthesis protein ThiC TERM 3034 2540437 - 2540427 - G 71 -8.2 -4.06491 | CCAAGCGTATAGAAA GGCG CCT CGCC GCAGGTCTTCAGCTG acpP 2542120 - 2542371 + | acyl carrier protein TERM 3035 2542681 - 2542693 + G 74 -6.9 -4.37092 | opp_overlap 2542681 ATGGGGTCGACAGCA CCTGG CAT CCGGG TTTTATGCGCCGCGT acd 2542371 - 2543552 + | acyl-CoA dehydrogenase TERM 3036 2543915 - 2543887 - g 89 -12.4 -4.02424 | opp_overlap 2543911 ACCAAGGACCAGAAA GCCACCGACATC GTGTT GACGCCGGCGGC CTGCTACCCGCTATA Atu2573 2543770 - 2544465 + | hypothetical protein Atu2574 2544808 - 2545455 + | hypothetical protein TERM 3037 2545884 - 2545872 - g 70 -4.7 -4.56597 | overlap 2545874 CCCCGGCTTGAAAAA CCCGG TCC CCGCG CTCGCTGGCGGCCGC TERM 3038 2546486 - 2546448 - g 85 -3.1 -5.42259 | gap 2, overlap 2546449 2546468 CCATGGCTAAAAAAA GCCGCCGAAGCCGGTATGA ACA TGAT-CCG-CGTGGGCGGC ACCATGGCCTATGAG Atu2575 2545452 - 2547908 + | mannosidase Atu2576 2549735 - 2547876 - | hypothetical protein TERM 3039 2552265 - 2552244 - g 70 -3.7 -4.61231 | gap 1, overlap 2552246 CGACAGCCTGAAAAA CGTGATCGAA ATC TACGATC-CG ACCAAATACATGAGC Atu2577 2550040 - 2552757 + | ABC transporter, nucleotide binding/ATPase protein Atu2578 2552801 - 2553256 + | cAMP-dependent protein kinase regulatory subunit Atu2579 2553448 - 2554308 + | metal dependant beta lactamase protein TERM 3040 2554333 - 2554345 + F 74 -4.7 -4.70659 | GACCTCGGTGTGGAG CGGCC TTC GACCG TTTTTCGATCTGGCG cyaA 2554576 - 2556270 + | adenylate cyclase Atu8180 2556790 - 2556308 - | hypothetical protein Atu2582 2558069 - 2556795 - | UDP-glucose/GDP-mannose dehydrogenase TERM 3041 2557894 - 2557879 - G 85 -5.4 -5.03314 | GCCAGCCTCAAAAAA TCGCTG GTGG CAACGA AACCGTCATCCTGCC TERM 3042 2558426 - 2558412 - g 72 -11.4 -3.34715 | overlap 2558410 CAGCTTTCTGAAACA GCCGGA CGA TCCGGC GCGGCCAGCGCTGAT TERM 3043 2558500 - 2558511 + G 74 -3.6 -4.77165 | overlap 2558491 CGGCAGGAGGGCGCA CCGG ACCT CTGG TTTTGTTATCACCCC TERM 3044 2559067 - 2559087 + G 79 -14.7 -2.87132 | GTCTGGCCGGGTCAT GGCGAGGCC TAT GGTCTCGCC TATCTCGAAGCGCAG Atu2583 2558263 - 2559360 + | glycosyltransferase TERM 3045 2559668 - 2559633 - g 72 -2.4 -4.80487 | gap 1, overlap 2559635 2559639 2559640 GACAAGGAAAAGAAA CAGGA-ACTCGGGCCGC ATC GCGACCCGGCCATCGTG CTTGATGAATTGCAA TERM 3046 2559660 - 2559639 - g 73 -10.1 -3.60072 | gap 1, overlap 2559635 2559633 2559640 GAAAAGAAACAGGAA CTCGGGCCGC ATC GCGACCCG-G CCATCGTGCTTGATG Atu2584 2559357 - 2560100 + | hypothetical protein Atu2585 2560931 - 2560092 - | hypothetical protein TERM 3047 2560390 - 2560408 + g 83 -4.4 -5.14563 | opp_overlap 2560379, overlap 2560391 AGCAGCATGCTCCCC TGCCCCGT ATC GCGCGGCG TTTTTTCGTCAAACG TERM 3048 2562169 - 2562157 - g 84 -9.1 -4.56597 | overlap 2562142 CCTCGTCGGCAAAAA GACCG CCG CGGTC AACAAAACCCCCGGC Atu2586 2561264 - 2563156 + | ABC transporter, nucleotide binding/ATPase protein (oligopeptide) TERM 3049 2564842 - 2564827 - g 83 -4.6 -5.01732 | AATCTCCTCAAAAAA TGGCGC AGAA GCGTCA CCGAGGAAGAACGGG Atu2587 2563153 - 2565054 + | ABC transporter, substrate binding protein (oligopeptide) Atu2588 2565056 - 2566054 + | ABC transporter, membrane spanning protein (oligopeptide) Atu2589 2566051 - 2567226 + | ABC transporter, membrane spanning protein (oligopeptide) TERM 3050 2568381 - 2568356 - g 76 -6.1 -4.60255 | gap 1, overlap 2568345 2568357 AGAACCCCGCAAAAA TGGCAGAGGCTC TCA AAGCC-CTGCCC AACCGCGCGCCTCCT Atu2590 2567299 - 2568507 + | hypothetical protein redB 2568671 - 2569798 + | glucosyltransferase redA 2569795 - 2570946 + | hypothetical protein cutC 2571652 - 2570912 - | copper homeostasis protein Atu2594 2572884 - 2571679 - | MFS permease TERM 3051 2571821 - 2571798 - G 70 -3.8 -4.62069 | TTCCGACGGCAAAAA TCAGCGCC CCGAGACC AGCGCCGA GGAAGATATTGACCG TERM 3052 2572969 - 2572933 - R 77 -8.5 -4.07687 | opp_overlap 2572933, overlap 2572934 2572937 ATCGCTGGGGTAAAA GCTACCGGCCCGCTGTC ATT GCCAGCGGGCCGAAATG ATGGGTTCGGGTGTA TERM 3053 2572968 - 2572934 - R 76 -12 -3.04398 | opp_overlap 2572933, overlap 2572933 2572937 TCGCTGGGGTAAAAG CTACCGGCCCGCTGTC ATT GCCAGCGGGCCGAAAT GATGGGTTCGGGTGT TERM 3054 2572965 - 2572937 - R 95 -18.1 -2.74605 | opp_overlap 2572933, overlap 2572934 2572933 CTGGGGTAAAAGCTA CCGGCCCGCTGTC ATT GCCAGCGGGCCGA AATGATGGGTTCGGG Atu2595 2574381 - 2572948 - | hypothetical protein TERM 3055 2573029 - 2573015 - G 78 -7 -4.66833 | opp_overlap 2573015, overlap 2573016 TTCCAAGGGTAAAAA TCGCCG GAC CGGCGG TGATTGGGAAGGTTT TERM 3056 2573524 - 2573537 + g 71 -5.9 -4.38154 | GTCGGCGAGAATGAT CGGCC GGCT GGTCG TTTTCTCCGCAATAT TERM 3057 2573619 - 2573597 - G 74 -5.5 -4.54727 | GGCCCGAAACGAAAA TCCTGCCGG GCGCT CCAGTAGGA TTGCGCGATCTCGTT TERM 3058 2573843 - 2573860 + g 84 -9.1 -4.47485 | gap 1, overlap 2573856 AGAACGGGAATTTTC GCCCAGGC CAC GCC-GGGC TTTTCTCCCGTTTTT TERM 3059 2573856 - 2573870 + g 73 -4.2 -4.59853 | overlap 2573843 TCGCCCAGGCCACGC CGGG CTTTTCT CCCG TTTTTAAGGCCTTCA Atu2596 2576313 - 2574394 - | beta-N-acetylhexosaminidase TERM 3060 2574556 - 2574530 - G 74 -7.2 -4.37886 | opp_overlap 2574535 GCACGGTTGAGAAAA TGTTCGGACCAG ATG CAGGCCTGAACA CCCTTCATCCGCTCC Atu2597 2577140 - 2576358 - | short chain dehydrogenase TERM 3061 2577186 - 2577204 + r 90 -5.3 -5.252 | gap 1, overlap 2577187 CCCACCACAGGGGCC T-CAGGCG AAAC CGCCTGTA TTTTTTCTCGCCCTC TERM 3062 2577187 - 2577202 + r 90 -10.4 -4.25873 | overlap 2577186 CCACCACAGGGGCCT CAGGCG AAAC CGCCTG TATTTTTTCTCGCCC Atu2598 2578081 - 2577218 - | RpiR family transcriptional regulator TERM 3063 2578217 - 2578230 + H 72 -3.9 -4.70453 | overlap 2578223 CATGACGGATGCCTT TGATT TGAA AATCA TTTTCTCTGTTAATT TERM 3064 2578758 - 2578777 + G 74 -11.4 -3.55761 | GCCGGCTGCATCAGG GCCGCTGG AAGA TCAGCGGC TTTACCGGCTACATG Atu8181 2578325 - 2578810 + | hypothetical protein TERM 3065 2578836 - 2578864 + T 74 -7.5 -4.13767 | gap 2, opp_overlap 2578829, overlap 2578839 ACGCAAGAGAACCTT GA--ACGCCGGGC CAAAA GCCCGGCGTTGTC TTTTCGCCTCGGGAC TERM 3066 2578839 - 2578859 + T 100 -15.4 -3.96506 | opp_overlap 2578829, overlap 2578836 CAAGAGAACCTTGAA CGCCGGGC CAAAA GCCCGGCG TTGTCTTTTCGCCTC malK 2580073 - 2578961 - | ABC transporter, nucleotide binding/ATPase protein (maltose/maltodextrin) TERM 3067 2579830 - 2579800 - G 74 -5.4 -4.57569 | overlap 2579802 CGATGTTTTCAAAAA CCGTCATATGCG GATAAAG CGCATAGGACTG GAACACCATGGCGAT TERM 3068 2580011 - 2579977 - G 81 -5.6 -4.84017 | overlap 2579984 AAGGGCCGACAAAAA CGACGAACTCGCCATC CCT GATGTCGAGCTGAACG CCCTTGATGACTTCG TERM 3069 2580217 - 2580250 + r 84 -13.8 -3.15758 | opp_overlap 2580214 2580215 2580218, overlap 2580219 CCCGCGGCGAAATTG ACCGGATGCGGGCG GCCTTG CGCCCGCATCCGTA TTCATGAGGAATTAT TERM 3070 2580249 - 2580218 - R 90 -17.3 -2.64155 | opp_overlap 2580217 2580219, overlap 2580214 2580215 CCGCGGCGAAATTGA CCGGATGCGGGCG GCCTTG CGCCCGCATCCGT ATTCATGAGGAATTA TERM 3071 2580219 - 2580248 + r 100 -20.8 -3.13899 | opp_overlap 2580218 2580214 2580215, overlap 2580217 CGCGGCGAAATTGAC CGGATGCGGGCG GCCTTG CGCCCGCATCCG TATTCATGAGGAATT malE 2581494 - 2580262 - | ABC transporter, substrate binding protein (maltose) TERM 3072 2580547 - 2580562 + g 76 -6.1 -4.63218 | AGAGGTGATGAACTT GGCGA ATTCGG TCGCC TTTTCTTCCACGCCG malG 2582390 - 2581533 - | ABC transporter, membrane spanning protein (maltose) malF 2583271 - 2582387 - | ABC transporter, membrane spanning protein (maltose) Atu2604 2584466 - 2583285 - | oxidoreductase TERM 3073 2583894 - 2583874 - G 71 -8.9 -3.8377 | AAGCTCGACACGAAA CGCGGCCGG GCA CCAACCACG CCATTATAGAGATCG TERM 3074 2584234 - 2584196 - G 93 -6.7 -5.24129 | gap 1, opp_overlap 2584215 GTTTTTCAGAAAAAA TGGTGCA-ACCCGCTTCA AGCC CGATGCGGATATGCTCCA GATGCATGTGGTTCG Atu2605 2584557 - 2584808 + | hypothetical protein Atu2606 2584907 - 2585659 + | GntR family transcriptional regulator TERM 3075 2586029 - 2586009 - g 78 -10.4 -3.85698 | gap 1 TTGCCCTCGCACAAA GCGC-CCGC AAGG GCGGCGCGC TCACCTTCTCGCTCG TERM 3076 2586613 - 2586625 + G 73 -9.1 -3.86822 | ATTGCTGCTGATTGC GCCGT TTT ACGGC TTTATCGAACAATTA glmS 2585684 - 2586706 + | glucosamine--fructose-6-phosphate aminotransferase nagA 2586703 - 2587869 + | N-acetylglucosamine-6-phosphate deacetylase Atu2609 2587873 - 2588799 + | ROK family transcriptional regulator Atu2610 2590077 - 2588806 - | hypothetical protein TERM 3077 2588895 - 2588920 + g 71 -6.8 -4.21827 | opp_overlap 2588890 2588889, overlap 2588891 2588890 ATCGAATAATCGCCC GCACGAAGGC AGGCGG GCCTTTGGGC TTTTCCGCTCTTTCC TERM 3078 2590017 - 2590033 + g 75 -7.9 -4.25283 | overlap 2590020 AGGTGTGGATATTCT GAACGGC TCT GCCGTCC TTTTCATGCCCGGCT Atu2611 2590825 - 2590097 - | hypothetical protein TERM 3079 2590469 - 2590447 - G 74 -3.2 -4.84359 | overlap 2590449 CCATTTCCAGAAAAA GCTCCGGCCG CGC CCGCCCGATC AGGAATTTCAGCGTA TERM 3080 2590538 - 2590527 - G 70 -3.6 -4.67552 | opp_overlap 2590534 2590535, overlap 2590528 2590529 2590534 GTCAGGAAAAAATAA GCGA GAAG CCGC CACGCCGTTCTCAGC TERM 3081 2590780 - 2590768 - G 79 -7.7 -4.56597 | GGCTTGCCGCAAAAA TCCAG CCG CTGGA AACCACGAAACGTCG dxr 2590929 - 2592122 + | 1-deoxy-D-xylulose 5-phosphate reductoisomerase TERM 3082 2592130 - 2592113 - T 100 -14.1 -5.18371 | opp_overlap 2592107 CGCCACAAAAGAAAA GGCCGCG TGAA CGCGGCC CTGACCTCTTCAATC hemA 2593201 - 2592158 - | 5-aminolevulinate synthase Atu2614 2593746 - 2593997 + | hypothetical protein TERM 3083 2594026 - 2594043 + F 100 -14.1 -4.7629 | opp_overlap 2594026 TACAGTTGCACAGAA GCCCCGG TCAC CCGGGGC TTTTTGCGTTAATGG TERM 3084 2594043 - 2594026 - f 95 -14.1 -3.49951 | opp_overlap 2594026 TACAGTTGCACAGAA GCCCCGG TCAC CCGGGGC TTTTTGCGTTAATGG TERM 3085 2594502 - 2594449 - g 84 -11.8 -4.1021 | overlap 2594443 GCCGACAAGGACAAA CCTGCCTCCGGCGATCTCG-GCCTTC TGAT AAAGGCGCGAGA-CGACAGGGACAGG CTGATCGCGGCACTT TERM 3086 2595897 - 2595909 + G 74 -6.2 -4.56597 | opp_overlap 2595896, overlap 2595886 GGTCACCGATACCAT CGGC CTTGT GCCG TTTTTCGACGCCGGC Atu2615 2594173 - 2596098 + | hypothetical protein TERM 3087 2596075 - 2596091 + F 71 -4.4 -4.56597 | gap 1, overlap 2596076 AATTTCGGCATTTAT G-CTGGC ATCG GCCAGTC TTTTTAAACGCCGCA TERM 3088 2596076 - 2596089 + F 71 -8.1 -3.90048 | overlap 2596075 ATTTCGGCATTTATG CTGGC ATCG GCCAG TCTTTTTAAACGCCG Atu2616 2596144 - 2600304 + | hypothetical protein cheW 2600470 - 2600949 + | chemotaxis protein TERM 3089 2601028 - 2601008 - f 93 -16.1 -3.03218 | opp_overlap 2601008, overlap 2601003 GACAACAGAACCAGA CCGCCGGAG CAC CCCCGGCGG TTTTTGTTTTCCCGC TERM 3090 2601008 - 2601028 + F 100 -13.9 -5.45802 | opp_overlap 2601008 2601003 GACAACAGAACCAGA CCGCCGGAG CAC CCCCGGCGG TTTTTGTTTTCCCGC TERM 3091 2601257 - 2601225 - f 75 -12 -2.9155 | gap 2, opp_overlap 2601226, overlap 2601220 TTGTTCAACATGATA CGGCGCGGACCGCACC TTG GGTGCGG-C-GAGCCG CCCGTGGACCGATAT TERM 3092 2602529 - 2602553 + G 75 -8.4 -4.21936 | opp_overlap 2602516, overlap 2602545 CAGGGGTCGAAGCCG CCCGCGCCGG GGAGG CCGGCAAGGG TTTTGCCGTTGTGGC TERM 3093 2603015 - 2602966 - g 100 -10.7 -5.28176 | gap 1 CCCATCGATAAAAAA GCCGCCAGCATATCCCGGCTACCG ACA CCTCAGCCGCGATATGCC-ACGGC AAGGGCGCATGGCAA cheD 2601286 - 2603058 + | methyl-accepting chemotaxis protein fdhD 2603904 - 2603089 - | formate dehydrogenase accessory protein Atu2620 2604151 - 2603978 - | hypothetical protein TERM 3094 2604104 - 2604120 + g 84 -9.3 -4.46775 | opp_overlap 2604104 GCTGAAAACAAAAAA GCGACCG AAA CGGCCGC TTTCTGTTTTAAATA TERM 3095 2604120 - 2604104 - G 100 -11.5 -5.79595 | opp_overlap 2604104 GCTGAAAACAAAAAA GCGACCG AAA CGGCCGC TTTCTGTTTTAAATA atpC 2604585 - 2604175 - | F0F1 ATP synthase subunit epsilon TERM 3096 2604675 - 2604709 + r 80 -9.8 -3.96148 | TTTCGCTGTCATTGG TCGGAAGGCGCGCGGT AAA ACCACGCGCCCACCAA TTTATAATCAGGCGG atpD 2606171 - 2604717 - | F0F1 ATP synthase subunit beta TERM 3097 2606123 - 2606143 + g 76 -6 -4.64676 | CCTGGGTAACCTTGC CCGCGCCG TTCAC CGCTGCGG TTTTCTTGGGGGTAG atpG 2607073 - 2606195 - | F0F1 ATP synthase subunit gamma TERM 3098 2606611 - 2606633 + g 77 -12 -3.65046 | opp_overlap 2606587 CCTTCTTGGCGATCT GGTCGGCGTT TTC AAAGCCGACC TTCTTCACGTCACGC TERM 3099 2607020 - 2607047 + g 76 -6.2 -4.652 | CGCCTTGGTAATCTT CTGCGTCGCCTT CACG GAGGCAATGCGG TTTTTCAGATCCTTT atpA 2608634 - 2607105 - | F0F1 ATP synthase subunit alpha atpH 2609194 - 2608634 - | F0F1 ATP synthase subunit delta TERM 3100 2609172 - 2609200 + g 70 -3.8 -4.68994 | gap 1, overlap 2609189 TCCGCTACACCGGAT GTTCCC-TGGGAG GTCT CTGCCACGGGCAC TTTTTCCCTGCTAAT TERM 3101 2609467 - 2609455 - R 70 -3.3 -4.72486 | CACAAATGCCAAAAA GCCCG CTT CAGAC CAGCCCGAAGACGTA Atu2626 2609848 - 2609462 - | hypothetical protein priA 2612145 - 2609929 - | primosome assembly protein PriA TERM 3102 2610858 - 2610844 - G 78 -10 -3.91897 | GCGGCGATTGAGAAA GAGCAG GGA CTGCTC GCCCTTTTCGATGGT TERM 3103 2611210 - 2611200 - G 75 -8.2 -4.28361 | CGAAGGGCAGGAAAA GCGC CGA GCGC GCGCCGGCCACCACC TERM 3104 2613047 - 2613007 - g 70 -10.4 -3.47349 | gap 1, opp_overlap 2613007 2613009 2613009, overlap 2613000 GCGGGAAATGCAGAA GCTGCGCGGCGCTTT-CGG CCTG CCGGAAAACGCCACCCCGC ATGCGCTGCGCCATT xerC 2612267 - 2613214 + | site-specific tyrosine recombinase XerC Atu2629 2613295 - 2614392 + | hypothetical protein Atu2630 2614903 - 2614370 - | hypothetical protein Atu2631 2615451 - 2614951 - | hypothetical protein TERM 3105 2615528 - 2615504 - R 100 -19.3 -4.00038 | CACGAGTATGAGAAA CCCCGGCCTGC ATG GCAAGCCGGGG TTCAACAGATGACTG lpdA 2616984 - 2615578 - | dihydrolipoamide dehydrogenase TERM 3106 2615768 - 2615783 + g 71 -7.6 -4.07687 | overlap 2615754 AGAACCCGGTCGGTT TCCTTG TCGG CAAGGA TTTTCACGAAACCAT Atu2633 2617662 - 2617048 - | RhtB family transporter Atu2634 2618120 - 2617707 - | hypothetical protein TERM 3107 2618083 - 2618066 - G 90 -5.6 -5.22006 | CGACGAGAAGAAAAA CGCTTA GACCGA TAAGCG GCAAAAAAGGCGAAG TERM 3108 2618102 - 2618092 - G 78 -2.4 -5.06103 | ATAAGCGGCAAAAAA GGCG AAG CGGC AAGAAATGTCGGCTG sucB 2619422 - 2618190 - | dihydrolipoamide acetyltransferase TERM 3109 2619212 - 2619234 + g 81 -13.4 -3.29043 | opp_overlap 2619209, overlap 2619199 2619233 TCTGGCCGAGAAGCG CGTCGAGACC AAC GGTCTCGCCG TTCTGCGCAACGATT kgd 2622472 - 2619476 - | alpha-ketoglutarate decarboxylase TERM 3110 2619701 - 2619679 - G 73 -14.2 -2.78384 | opp_overlap 2619699 CTTCCTGGCACCAGA CCATTTCCGC GTG GCGGAAACGG GAAAGCTCGTTGATG sucD 2623550 - 2622648 - | succinyl-CoA synthetase subunit alpha TERM 3111 2622812 - 2622849 + g 93 -14.9 -3.74526 | gap 1, opp_overlap 2622825, overlap 2622805 CCTTCGGAGCCGTAC GGCCCGCGATGAAGCCGG CCA TCGGCTTC-TTGCGGCCC TTCTTGGCTTCATCG sucC 2624761 - 2623568 - | succinyl-CoA synthetase subunit beta Atu2639 2625757 - 2624795 - | malate dehydrogenase TERM 3112 2625341 - 2625362 + g 72 -10.9 -3.28712 | opp_overlap 2625319 CATGCCGACGACCTT GTTCTTCGG CAGG CCGGAGAAC TTCTGCAGCGCCCAG TERM 3113 2625922 - 2625951 + r 71 -5.8 -4.30576 | gap 1, opp_overlap 2625922 2625921 TAAACGTAAGATAAT GCGTCACGAAAGT GTCAA ACTTTC-TGCCGC TTTTCGTGGTGGAGC Atu2640 2627099 - 2625936 - | hypothetical protein TERM 3114 2626274 - 2626264 - G 93 -8.2 -5.0925 | TCGGAAAAGGAAAAA CGGG CAA CCCG GCCGCTGGCGCGCGG TERM 3115 2626718 - 2626728 + g 74 -3.2 -4.84529 | TGGGATCGGCCTGTT TGGT CTC GCCA TTTTTCAGTTTCTGC TERM 3116 2627124 - 2627106 - R 90 -8.1 -4.72272 | gap 1 TGGCTTCATGAAAAA GCGCTCCG GTCG CGG-GCGC AGCAAAGCACCCGCG Atu2641 2627734 - 2627192 - | hypothetical protein TERM 3117 2627908 - 2627886 - R 95 -11.3 -4.56597 | gap 1, overlap 2627888 GCCCGGTTGTAAAAA GAGCCGCGGT CGAG ACCGCGGC-C GGATAGATTTTCTCT TERM 3118 2627907 - 2627888 - R 100 -15 -3.90048 | overlap 2627886 CCGGTTGTAAAAAGA GCCGCGGT CGAG ACCGCGGC CGGATAGATTTTCTC sdhB 2628719 - 2627940 - | succinate dehydrogenase iron-sulfur subunit sdhA 2630576 - 2628735 - | succinate dehydrogenase flavoprotein subunit sdhD 2630964 - 2630584 - | succinate dehydrogenase hydrophobic membrane anchor sdhC 2631369 - 2630977 - | succinate dehydrogenase cytochrome B-556 subunit TERM 3119 2631288 - 2631264 - G 71 -6.3 -4.41348 | GCGTCCCGAAATAAA GCGCCCCGC CCGTGAT GCGGTGCAC GATGGATGCAACCAT TERM 3120 2631683 - 2631659 - H 72 -3.5 -4.78572 | GGTTAACCAATAAAA CCGGAGCATGA AGC TCATGTTACAG CGCCGAATCGCCGCC TERM 3121 2632008 - 2631992 - g 80 -10.1 -4.11216 | TGTCCATGCCGAAAA CGCAGAC GAT GCCTGCG CATACGAACATGGCG Atu2646 2631666 - 2632043 + | hypothetical protein Atu2647 2632688 - 2632044 - | hypothetical protein TERM 3122 2632512 - 2632495 - G 71 -9.1 -3.76568 | TGATCGAGAATATAA CGGGCAA GCCC CTGCCCG CCGGCCCAGGCGAAG Atu2648 2633139 - 2632696 - | hypothetical protein Atu2649 2633439 - 2633146 - | YciI-like protein gpsA 2634510 - 2633527 - | glycerol-3-phosphate dehydrogenase gcp 2635607 - 2634510 - | O-sialoglycoprotein endopeptidase TERM 3123 2635225 - 2635207 - G 79 -8.8 -4.26589 | ATCAGATAGGGAAAA GACAGACC ATC GGTCAGTC GCGCCGTCAGCGCGT TERM 3124 2635518 - 2635499 - G 74 -6.4 -4.386 | CAAGCTGCGACAAAA CGACATCG GAGA CGATCTCG CCACGCCCGTCCGCA TERM 3125 2636424 - 2636459 + G 70 -3.2 -4.58663 | gap 1 CTGTCGTACCCCCAT TGCCGGTTA-CGCCACC TGC GAAGGTGATAACCTGCA TTTTTCCGGCCTGAT hemC 2635681 - 2636610 + | porphobilinogen deaminase TERM 3126 2636939 - 2636961 + G 80 -3.4 -5.08824 | gap 1, overlap 2636938 GCTCTGGGTCTGACC GTGCTGGTG AAACAG CACC-GCGC TTTTTTGACTGAAGA hem4 2636615 - 2637355 + | uroporphyrinogen-III synthase Atu2655 2637429 - 2638874 + | hypothetical protein TERM 3127 2639483 - 2639469 - g 80 -10 -4.09685 | GGCGACGCTGGAAAA CCGTTG TCG CAACGG ACAATGGGACGATGC TERM 3128 2640407 - 2640397 - g 83 -2.4 -5.24129 | opp_overlap 2640398, overlap 2640398 GCGTCGGATAAAAAA GCGG ACG CCGT GCCGTTTTTCGGTGG TERM 3129 2640398 - 2640411 + G 70 -3.1 -4.65895 | gap 1, opp_overlap 2640397 2640398 CGTCGGATAAAAAAG CGG-AC GCC GTGCCG TTTTTCGGTGGCGCG TERM 3130 2640461 - 2640451 - g 71 -6.8 -4.15044 | overlap 2640452 CCGGGTGTCAAGAAA TCCG GCG CGGA AGCCGAACCCAAGAC Atu2656 2638879 - 2640495 + | hypothetical protein Atu2657 2640510 - 2640998 + | hypothetical protein guaA 2640988 - 2641719 + | glutamine amidotransferase Atu2659 2642967 - 2641732 - | MFS permease TERM 3131 2642805 - 2642793 - G 72 -2.6 -4.84529 | GCAGAAACTGAAAAA GACC GATCA GGCC GAGATAAAAGGCGTT TERM 3132 2643706 - 2643692 - g 85 -3.5 -5.40072 | TTGCTGGCAAAAAAA CTCGG CCTGC CCAAG TCTTCCATTACCTTC TERM 3133 2643750 - 2643777 + G 93 -15.6 -3.54307 | opp_overlap 2643750 CAGCGCGCAAAAAAA TCCTCCGGATCG ATAC CGACCCGGAGGA TTTCGAAAAGCTCTT TERM 3134 2643777 - 2643750 - g 100 -17.8 -5.41143 | opp_overlap 2643750 CAGCGCGCAAAAAAA TCCTCCGGATCG ATAC CGACCCGGAGGA TTTCGAAAAGCTCTT Atu2660 2643260 - 2643811 + | hypothetical protein ppa 2644350 - 2643817 - | inorganic pyrophosphatase Atu2662 2645026 - 2644520 - | acetyltransferase TERM 3135 2645220 - 2645188 - R 72 -11.4 -3.15161 | opp_overlap 2645196, overlap 2645196 ATAAAAACGAAAGCA TAAAAAAACCCGGC TCAAG GCCGGGTTTTTCAA ATTCGTGCCGCCTAG TERM 3136 2645212 - 2645196 - R 100 -10.8 -5.75599 | opp_overlap 2645196, overlap 2645188 GAAAGCATAAAAAAA CCCGGC TCAAG GCCGGG TTTTTCAAATTCGTG TERM 3137 2645196 - 2645212 + r 95 -11.5 -4.67904 | opp_overlap 2645196 2645188 GAAAGCATAAAAAAA CCCGGCT CAA GGCCGGG TTTTTCAAATTCGTG TERM 3138 2645229 - 2645260 + r 77 -8 -4.08692 | gap 1, overlap 2645230 TTTTCAAATTCGTGC CGCCTAGC-CGCAAT CAG ATTGCGAGCTTGGCC TTTTCAAAACGCTTG TERM 3139 2645230 - 2645259 + r 72 -11.5 -3.04894 | gap 1, overlap 2645229 TTTCAAATTCGTGCC GCCTAGC-CGCAAT CAG ATTGCGAGCTTGGC CTTTTCAAAACGCTT typA 2647062 - 2645242 - | GTP-binding tyrosin phosphorylated protein TERM 3140 2646835 - 2646809 - G 74 -13.1 -3.19212 | gap 1, opp_overlap 2646798, overlap 2646807 2646805 ACCATCGACAAGATA CGCTCGACTTCG CCGC CGAAGTCG-GCG TGGCCGGGGGTGTCG TERM 3141 2646992 - 2647013 + g 73 -4.3 -4.68593 | opp_overlap 2646996, overlap 2646993 2646996 GAGCCGGACTGCTTC AGAAGCTCG TCCA CGAGCGTCG TTTTTCCATGGTCAA TERM 3142 2647177 - 2647153 - R 76 -10.7 -3.71649 | opp_overlap 2647175, overlap 2647154 TTTGCAAATGCGAAA GGGGGGCTCAT GTC ATAAGCCCCCT GCGCTCAGGTTCTAG TERM 3143 2647176 - 2647154 - R 83 -14.2 -2.82668 | opp_overlap 2647175, overlap 2647153 TTGCAAATGCGAAAG GGGGGCTCAT GTC ATAAGCCCCC TGCGCTCAGGTTCTA dcp 2649273 - 2647213 - | peptidyl-dipeptidase TERM 3144 2648889 - 2648899 + g 71 -8.2 -4.07885 | overlap 2648888 CGCCTGTCAGCCCAA GCGC CTC GCGC TTTTCCCACAGCGTG Atu2665 2649520 - 2649978 + | MarR family transcriptional regulator Atu2666 2650002 - 2651180 + | MFS permease TERM 3145 2651186 - 2651209 + T 100 -15.2 -3.86835 | opp_overlap 2651186 CAAGACATGAAAAAA CCCGCCGGCG TCAC CGCCCGCGGG TTTCATAATCTTTAC TERM 3146 2651209 - 2651186 - T 100 -15.2 -5.27399 | opp_overlap 2651186 CAAGACATGAAAAAA CCCGCCGGCG TCAC CGCCCGCGGG TTTCATAATCTTTAC argG 2652458 - 2651235 - | argininosuccinate synthase TERM 3147 2652990 - 2652944 - g 73 -10.8 -3.63627 | TGCGGATATTCTAAA CGTCGCCAAGGATGGCGAAG CGCAGAT CGTCGCCATCCCGACCGACG TCTCGAAACTCGATG Atu2668 2652774 - 2653628 + | oxidoreductase TERM 3148 2653634 - 2653665 + F 81 -12.2 -3.57144 | opp_overlap 2653625, overlap 2653636 GAAAAACTGAAGCTC CAGCCGCCGTGCCT GAAA GGGTGCGGCGGCTA TTTCCCCCTCGCAGG TERM 3149 2653636 - 2653663 + F 95 -14.8 -3.36515 | overlap 2653634 AAAACTGAAGCTCCA GCCGCCGTGCCT GAAA GGGTGCGGCGGC TATTTCCCCCTCGCA TERM 3150 2654257 - 2654280 + G 72 -11 -3.28924 | GGTCCATCATCGTGG CGCTGCCGAT CGGC ATCGGCATCG TTGTCACCGCCGATA Atu2669 2653761 - 2654408 + | RhtB family transporter TERM 3151 2654443 - 2654416 - T 85 -12.8 -3.59979 | opp_overlap 2654422, overlap 2654422 CGCGCTGAGGGCAAA TAAAAAGGCGCC CAAA GGCGCCTTTTTG CAATCAGCCGATCAG TERM 3152 2654422 - 2654437 + T 100 -11.8 -4.62069 | opp_overlap 2654416 2654422 GAGGGCAAATAAAAA GGCGCC CAAA GGCGCC TTTTTGCAATCAGCC TERM 3153 2654437 - 2654422 - T 100 -11.8 -5.28942 | opp_overlap 2654422, overlap 2654416 GAGGGCAAATAAAAA GGCGCC CAAA GGCGCC TTTTTGCAATCAGCC Atu2670 2655241 - 2654447 - | ABC transporter, nucleotide binding/ATPase protein TERM 3154 2654791 - 2654822 + g 80 -10 -4.07568 | opp_overlap 2654800 CCTGCCTCTGCCCAC CCGACAGAAGGTCC ATAC GGTCCTTCAGGCGG TTTTCGAGGCCAAGA Atu2671 2656119 - 2655238 - | ABC transporter, membrane spanning protein TERM 3155 2655553 - 2655523 - G 70 -10.4 -3.53091 | overlap 2655526 ATTGGTCTGCGCAAA CAATGCGCCGCCGA GAG CCACCAGCGCATTG GAAAGCGCCATGCCG TERM 3156 2656179 - 2656208 + r 71 -10.5 -3.17725 | opp_overlap 2656182 GTCTCGTGCCACGTA AAACGGGCGGCGG AATG CCGCCGCCCGCAA TTCAGTCTGGTTTCG TERM 3157 2656205 - 2656182 - R 100 -21 -4.18018 | opp_overlap 2656179 TCGTGCCACGTAAAA CGGGCGGCGG AATG CCGCCGCCCG CAATTCAGTCTGGTT Atu2672 2657179 - 2656226 - | hypothetical protein Atu2673 2658460 - 2657288 - | hypothetical protein TERM 3158 2658633 - 2658608 - R 84 -9 -4.26881 | gap 1, overlap 2658603 GTCGAGAAAATCAAA GGCGGA-GCAC TTTTC GCGCATCCGCC TGTCAATGTTGCCGC TERM 3159 2658706 - 2658674 - R 100 -12.7 -4.64657 | overlap 2658680 TCAAACTGGCAAAAA CGCAAATGGCCGGTC GAG GACCGGCCAATCACA AATCTGACAAAGCGT TERM 3160 2658700 - 2658680 - R 100 -16.9 -3.99805 | overlap 2658674 TGGCAAAAACGCAAA TGGCCGGTC GAG GACCGGCCA ATCACAAATCTGACA Atu8182 2659230 - 2658727 - | hypothetical protein Atu2675 2659908 - 2659528 - | hypothetical protein Atu2676 2660265 - 2659960 - | pterin-4-alpha-carbinolamine dehydratase TERM 3161 2660724 - 2660693 - gR 75 -11.5 -3.31263 | opp_overlap 2660691 2660687 AGGCCACCCGGAGAA CGTCCCCGATCCC TATTAC GGGGCCGAGGACG GGTTCCTTGATGTCT ligT 2661331 - 2660738 - | 2'-5' RNA ligase Atu2677 2660325 - 2660804 + | protein tyrosine phosphatase Atu2679 2662050 - 2661400 - | esterase Atu2680 2662141 - 2662851 + | ABC transporter, nucleotide binding/ATPase protein TERM 3162 2663689 - 2663719 + G 76 -10.3 -3.794 | CCGCCCTTATCGTCG GCGGGGTCGGCGT CGCCA ACGCCGTTCGCGC TTTCCTCGATTCCAA TERM 3163 2664100 - 2664123 + G 81 -4.5 -5.00616 | gap 1 CAACCGGCCTGCTTC TGGCG-GCGC TCGCC GCACTCGCCA TTTTTTCGGCGGAAG Atu2681 2662848 - 2665409 + | hypothetical protein Atu2682 2665628 - 2666410 + | hypothetical protein TERM 3164 2666442 - 2666459 + T 100 -14.1 -5.27938 | opp_overlap 2666442 2666433 GACAAACATGCGAAA GGCGGCC CTGC GGCCGCC TTTTTATTTGGGAAT TERM 3165 2666459 - 2666442 - T 95 -14.1 -3.70571 | opp_overlap 2666442, overlap 2666433 GACAAACATGCGAAA GGCGGCC CTGC GGCCGCC TTTTTATTTGGGAAT Atu2683 2666926 - 2666534 - | hypothetical protein TERM 3166 2667283 - 2667297 + r 70 -10 -3.43931 | GGATCGGATCTTCCA TCGCCA GAG TGGCGA TTACTGTGTTTCATT Atu2684 2667963 - 2667298 - | hypothetical protein TERM 3167 2668217 - 2668183 - R 100 -13.7 -4.3078 | gap 1, opp_overlap 2668189, overlap 2668189 AACGAGACCAAGAAA TTGAAAGGCGCCGGGA TTTC TCCCGGCGCCTTA-AA TCGTTCAAGCTTTAG TERM 3168 2668212 - 2668189 - R 100 -19.6 -3.93864 | opp_overlap 2668189, overlap 2668183 ACCAAGAAATTGAAA GGCGCCGGGA TTTC TCCCGGCGCC TTAAATCGTTCAAGC TERM 3169 2668189 - 2668212 + r 100 -19.6 -3.13164 | opp_overlap 2668189 2668183 ACCAAGAAATTGAAA GGCGCCGGGA TTTC TCCCGGCGCC TTAAATCGTTCAAGC acnA 2670922 - 2668229 - | aconitate hydratase ccmA 2671192 - 2671833 + | cytochrome c biogenesis protein CcmA ccmB 2672036 - 2672695 + | ABC transporter, membrane spanning protein (heme) ccmC 2672770 - 2673531 + | ABC transporter, membrane spanning protein (heme) Atu2689 2673536 - 2673709 + | hypothetical protein TERM 3170 2673758 - 2673740 - f 88 -11 -4.21098 | opp_overlap 2673743, overlap 2673732 2673743 ACACCAAGGCCAAAA CAACGGGC CGC GCCCGTTA TGCGCTGGCGCTGCT TERM 3171 2673743 - 2673755 + F 73 -10.5 -3.32963 | opp_overlap 2673732 2673740 2673743 CCAAGGCCAAAACAA CGGGC CGC GCCCG TTATGCGCTGGCGCT TERM 3172 2673755 - 2673743 - f 86 -10.5 -4.21933 | opp_overlap 2673743, overlap 2673732 2673740 CCAAGGCCAAAACAA CGGGC CGC GCCCG TTATGCGCTGGCGCT ccmG 2673817 - 2674305 + | thiol:disulfide interchange protein Atu2691 2675470 - 2674325 - | GGDEF family protein Atu8092 2676223 - 2675627 - | hypothetical protein TERM 3173 2675963 - 2675947 - G 70 -4.3 -4.43877 | opp_overlap 2675947 GAACCGCGAAAGAAA GCCGCAT GGA AAACGGC TTGTTGCGGAACAGC ispZ 2676870 - 2676220 - | intracellular septation protein TERM 3174 2676407 - 2676394 - G 75 -2.3 -4.96106 | overlap 2676396 GAGAAAGAGGAAAAA CACGC CCCA GCGCA GCGTCAGTTTGCGCC fstY 2678309 - 2676873 - | cell division particle Atu2694 2679616 - 2678342 - | hypothetical protein dapF 2680512 - 2679613 - | diaminopimelate epimerase Atu2696 2681705 - 2680635 - | hypothetical protein TERM 3175 2681696 - 2681683 - G 76 -5.3 -4.59853 | CCAAGTGCGGAAAAA CGAAA AAAG TTTCG ACGTTTCATGACAAA TERM 3176 2681924 - 2681954 + H 100 -11 -4.81851 | opp_overlap 2681927, overlap 2681925 AGATCCCGGAGGTCA ACACCCGACAGCGC GAT GCGCCCTCGGGTGC TTTTTGGCTTTGCGT TERM 3177 2681925 - 2681953 + H 95 -14.5 -3.48026 | opp_overlap 2681927, overlap 2681924 GATCCCGGAGGTCAA CACCCGACAGCGC GAT GCGCCCTCGGGTG CTTTTTGGCTTTGCG TERM 3178 2681951 - 2681927 - H 84 -13.5 -3.05844 | opp_overlap 2681925 2681924 TCCCGGAGGTCAACA CCCGACAGCGC GAT GCGCCCTCGGG TGCTTTTTGGCTTTG TERM 3179 2683263 - 2683231 - g 77 -12 -3.64755 | gap 1 ACACAGCCGCAAGAA GC-GCATCGCCGCCG GCTC CGGCACCGATGCCGC CGAAATCAACAAGCT ffh 2682032 - 2683603 + | signal recognition particle protein TERM 3180 2683942 - 2683895 - g 81 -13.4 -3.41693 | gap 1, overlap 2683897 2683898 2683923 2683925 GGCATCATGAAGCAA TAGCCGCCGAACATGGCGGTCAT GAA AAGACCGCC-TGACCGGCGGACA AGCCATCTTAAGGAG TERM 3181 2683940 - 2683897 - g 81 -13.8 -3.27743 | gap 1, overlap 2683895 2683898 2683923 2683925 CATCATGAAGCAATA GCCGCCGAACATGGCGGTCAT GAA AAGACCGCC-TGACCGGCGGA CAAGCCATCTTAAGG TERM 3182 2683939 - 2683898 - g 83 -17.3 -2.56164 | gap 1, overlap 2683897 2683895 2683923 2683925 ATCATGAAGCAATAG CCGCCGAACATGGCGGTCAT GAA AAGACCGCC-TGACCGGCGG ACAAGCCATCTTAAG tyrA 2683615 - 2683932 + | chorismate mutase TERM 3183 2683941 - 2683923 - f 77 -7.3 -4.25104 | overlap 2683898 2683897 2683895 2683925 TGGCGGTCATGAAAA GACCGCC TGACC GGCGGAC AAGCCATCTTAAGGA TERM 3184 2684037 - 2684060 + G 71 -8.8 -3.72695 | gap 1, overlap 2684054 2684058 GATCGTCGTTGCTGA CGCCCGTTCGC CCC GCGA-CGGCCG TTTCCTCGAGAAGGT rpsP 2683966 - 2684346 + | 30S ribosomal protein S16 TERM 3185 2684370 - 2684397 + F 100 -17 -6.11392 | opp_overlap 2684370 GAAACTTTTGAAGAA CGGGTGGCGTGG TTTT CCATGCCGCCCG TTTTTTTGTTTATTT TERM 3186 2684397 - 2684370 - f 86 -12.6 -3.64283 | opp_overlap 2684370 GAAACTTTTGAAGAA CGGGTGGCGTGG TTTT CCATGCCGCCCG TTTTTTTGTTTATTT TERM 3187 2684839 - 2684814 - g 74 -3.9 -4.86621 | gap 1, opp_overlap 2684826, overlap 2684815 2684818 ATGCCGAAGGAAAAA GC-TACGGCGCC GTC AGCGCCGTCTAC GATTTCGGCGCGGGT TERM 3188 2685019 - 2685007 - g 74 -6.9 -4.37527 | opp_overlap 2685007 CGACAAGGACCAAAA CGGCA TGT CGCCG TTCGGTAAGAAATAA rimM 2684495 - 2685034 + | 16S rRNA-processing protein trmD 2685039 - 2685737 + | tRNA (guanine-N(1)-)-methyltransferase TERM 3189 2685728 - 2685718 - T 76 -3.2 -5.00884 | overlap 2685696 ATCTGCTGGAAAAAA CTCA GGC CGAG ACGAAATAATAGGCC Atu2702 2686465 - 2685719 - | hypothetical protein TERM 3190 2686137 - 2686126 - G 78 -7.2 -4.72272 | overlap 2686127 2686128 GGCCCGCAGCAAAAA CCGC CGTG GCGG CCAGCAGCAACCATG rplS 2686734 - 2687273 + | 50S ribosomal protein L19 TERM 3191 2687301 - 2687318 + F 100 -10.5 -5.34555 | opp_overlap 2687301, overlap 2687294 GATGGATGCACGAAA GGCGGCC TTCG GGTCGCC TTTTTTGTGGTCTCA Atu2704 2687325 - 2687555 + | hypothetical protein prsD1 2687598 - 2689331 + | ABC transporter, nucleotide binding/ATPase protein (protein) TERM 3192 2689831 - 2689809 - g 91 -7.7 -4.72986 | overlap 2689812 2689827 GATCGGCATGAAAAA GCAGCTTGC CACAC GCAAGCTTC AACTGGCCGACGAGG prsE2 2689324 - 2690637 + | HlyD family secretion protein rzcA 2690817 - 2691770 + | rhizobiocin TERM 3193 2691840 - 2691807 - T 100 -13.9 -4.09685 | opp_overlap 2691810, overlap 2691810 TTCTATCGCTTAAAA TGATTGTGGCCCGGA AACC TCCGGGCCACAATTT TTATATGTGCAACTG TERM 3194 2691837 - 2691810 - T 100 -20 -3.08508 | opp_overlap 2691810, overlap 2691807 TATCGCTTAAAATGA TTGTGGCCCGGA AACC TCCGGGCCACAA TTTTTATATGTGCAA TERM 3195 2691810 - 2691837 + T 100 -20 -5.03994 | opp_overlap 2691810 2691807 TATCGCTTAAAATGA TTGTGGCCCGGA AACC TCCGGGCCACAA TTTTTATATGTGCAA Atu2708 2693168 - 2691891 - | MFS permease TERM 3196 2693010 - 2692998 - G 74 -3.3 -4.77759 | ATAACCGATGAAAAA CAGCG AAG CGCCA AGACCGTAGGCATAT TERM 3197 2693129 - 2693118 - G 71 -7.2 -4.21989 | overlap 2693109 2693119 GAGAAGGCCAAGAAA CGGC ATCA GCCG CCAGGTGATCTTCGA Atu8028 2693384 - 2693518 + | hypothetical protein TERM 3198 2694562 - 2694534 - g 85 -7.4 -4.72497 | gap 1, opp_overlap 2694537 TATCGAGGAAGAAAA CAAGCGCACTTCC AAAT GGC-GCGCGCTTG ACTATATGGGCCTGA leuC 2693584 - 2694993 + | isopropylmalate isomerase large subunit TERM 3199 2695015 - 2695044 + T 89 -13.7 -3.76775 | opp_overlap 2695021, overlap 2695021 CAGATGCCAGACAAC AAAAAACCCCGGA GCGA TCCGGGGTTTTTC TTTGGCTCTATTCCG TERM 3200 2695021 - 2695038 + T 100 -12.7 -5.31519 | opp_overlap 2695021, overlap 2695015 CCAGACAACAAAAAA CCCCGGA GCGA TCCGGGG TTTTTCTTTGGCTCT TERM 3201 2695038 - 2695021 - T 100 -12.7 -5.60689 | opp_overlap 2695021 2695015 CCAGACAACAAAAAA CCCCGGA GCGA TCCGGGG TTTTTCTTTGGCTCT Atu2710 2696578 - 2695052 - | hypothetical protein Atu2711 2696771 - 2696595 - | hypothetical protein thiQ 2697537 - 2696821 - | ABC transporter, nucleotide binding/ATPase protein (thiamine) TERM 3202 2696925 - 2696935 + g 85 -3.2 -5.39721 | CAAGAAAAACCACCC GTTG CGC CAGC TTTTTTATGTCGTCG thiP 2699159 - 2697534 - | thiamine transporter membrane protein TERM 3203 2698285 - 2698268 - G 74 -7 -4.30576 | GCCCGACCAGGAAAA CGGCAA AAACGA TTGCCG CACCGTCCCACAGCC TERM 3204 2699116 - 2699099 - G 100 -14.1 -4.44797 | CCATGAACAGGAAAA CGGCGGC AAAA GCCGCCG TCCCCAAAATGATCG thiB 2700192 - 2699179 - | thiamine transporter substrate binding subunit Atu2715 2700778 - 2700386 - | hypothetical protein Atu2716 2702702 - 2700876 - | ABC transporter, nucleotide binding/ATPase protein TERM 3205 2701143 - 2701164 + g 71 -5.8 -4.33165 | overlap 2701138 2701149 CTCCTGCGACGGCGA GGCTGAGG ATACGG CCTTGGCC TTTTCCTGCCTTTCG Atu2717 2703360 - 2702707 - | hypothetical protein TERM 3206 2703538 - 2703559 + H 100 -12.9 -6.09196 | GGCAATTTCCTGGGA CCGGCCGCG ATTT CGCTGCCGG TTTTTTTGTTTTCGC metA 2703611 - 2704537 + | homoserine O-succinyltransferase TERM 3207 2704916 - 2704906 - g 70 -4.6 -4.46267 | AGAACTGAACGAAAA GGGC GTG ACCC ATCTGCACGGCGGCA Atu2719 2704613 - 2705632 + | aldose epimerase mtgA 2706457 - 2705666 - | monofunctional biosynthetic peptidoglycan transglycosylase TERM 3208 2705748 - 2705722 - G 72 -11.5 -3.30124 | gap 1, opp_overlap 2705724 CCCGACGCTCGATAA GGC-CGGCCAGC CGCT GCAGGCCGCGCC CGGGTTTGCTCGCCA TERM 3209 2706706 - 2706725 + G 78 -4.9 -4.81212 | opp_overlap 2706715, overlap 2706699 2706710 CATGGCGTGCTGAAC GGCGGCA AACGCC TGCGGCC TTTTCTTGTCATCGA TERM 3210 2707434 - 2707413 - g 100 -15.9 -4.11216 | overlap 2707385 CCCCTACGGCGAAAA GGCCGCGAT TCTC ATCGCGGCC GCAAGATTCATCGCC ispA 2706550 - 2707464 + | geranyltranstransferase TERM 3211 2707473 - 2707460 - T 74 -6.7 -4.27316 | opp_overlap 2707460 TCGCCGAACGGAAAA GCTGA CCTC TCAGC TTTTCATCATCCAAT TERM 3212 2707460 - 2707473 + T 74 -6.7 -4.30844 | opp_overlap 2707460 TCGCCGAACGGAAAA GCTGA CCTC TCAGC TTTTCATCATCCAAT ompA 2708150 - 2707488 - | porin TERM 3213 2708049 - 2708024 - G 74 -12.5 -3.25223 | opp_overlap 2708034 2708035 CACCGAGAGCACCAA CGACAGCGCCG ATGC CGGCACCGCCG GCCGTGTTCGACATC gcpE 2709467 - 2708217 - | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase Atu2724 2710778 - 2709588 - | MFS permease Atu2725 2711591 - 2710791 - | DeoR family transcriptional regulator TERM 3214 2711687 - 2711667 - R 100 -11.8 -5.46657 | opp_overlap 2711667, overlap 2711643 2711668 GAGCGCAATAAAAAA CGCCCGCC GGGAA GGCGGGCA TCTGTAACTCTATTG TERM 3215 2711686 - 2711668 - R 90 -13.1 -3.86909 | opp_overlap 2711667, overlap 2711643 2711667 AGCGCAATAAAAAAC GCCCGCC GGGAA GGCGGGC ATCTGTAACTCTATT pycA 2715180 - 2711719 - | pyruvate carboxylase TERM 3216 2715250 - 2715240 - R 70 -5.4 -4.41897 | AATAAAGCAGCAAAA CCAA GTC TTGG AAAGGGCAATTCCGG Atu2727 2716023 - 2715286 - | LuxR family transcriptional regulator TERM 3217 2715655 - 2715634 - G 73 -9.4 -3.92373 | overlap 2715622 2715619 GACCGCACCGATAAA TCCCGCGC GACCAT GCACGGGA AAGGCATAACCGCCC chvA 2716357 - 2718123 + | cyclic beta-1,2-glucan ABC transporter TERM 3218 2718133 - 2718108 - T 72 -11.1 -3.05816 | GCAGCCGCGACCGAA GGCCATAGCCT CCTG AGGCCTTGGCC GAGGCAACAAAGATA TERM 3219 2718181 - 2718141 - T 76 -12 -3.05384 | gap 1, opp_overlap 2718150, overlap 2718145 2718150 CCTTGGCCGAGGCAA CAAAGATAA-GGGCGGGCA GCAT TGTCCGCCCTTTTTCTTTG CCCGCTTTCCGGGGA TERM 3220 2718176 - 2718145 - T 74 -7.2 -4.20516 | opp_overlap 2718150, overlap 2718141 2718150 GGCCGAGGCAACAAA GATAAGGGCGGGCA GCAT TGTCCGCCCTTTTT CTTTGCCCGCTTTCC TERM 3221 2718150 - 2718171 + T 100 -13.7 -5.27335 | opp_overlap 2718150 2718145 2718141 AGGCAACAAAGATAA GGGCGGGCA GCAT TGTCCGCCC TTTTTCTTTGCCCGC TERM 3222 2718171 - 2718150 - T 85 -11.5 -3.97444 | opp_overlap 2718150, overlap 2718145 2718141 AGGCAACAAAGATAA GGGCGGGCA GCAT TGTCCGCCC TTTTTCTTTGCCCGC Atu2729 2718504 - 2718217 - | hypothetical protein TERM 3223 2718810 - 2718779 - R 100 -12.2 -5.28176 | opp_overlap 2718781 2718783, overlap 2718780 2718781 2718783 GCCACCCACAAAAAA TTCAGGCCCCTGCG TCAC CGCAGGAGCCTGTG TCTAAAGGCGGACAG TERM 3224 2718809 - 2718780 - R 100 -15.7 -3.76182 | opp_overlap 2718781 2718783, overlap 2718779 2718781 2718783 CCACCCACAAAAAAT TCAGGCCCCTGCG TCAC CGCAGGAGCCTGT GTCTAAAGGCGGACA TERM 3225 2718808 - 2718781 - R 100 -19.2 -2.84986 | opp_overlap 2718781 2718783, overlap 2718780 2718779 2718783 CACCCACAAAAAATT CAGGCCCCTGCG TCAC CGCAGGAGCCTG TGTCTAAAGGCGGAC TERM 3226 2718781 - 2718808 + r 93 -17 -2.87132 | opp_overlap 2718781 2718780 2718779 2718783, overlap 2718783 CACCCACAAAAAATT CAGGCCCCTGCG TCAC CGCAGGAGCCTG TGTCTAAAGGCGGAC TERM 3227 2718806 - 2718783 - R 87 -16 -2.96157 | opp_overlap 2718781 2718783, overlap 2718781 2718780 2718779 CCCACAAAAAATTCA GGCCCCTGCG TCAC CGCAGGAGCC TGTGTCTAAAGGCGG TERM 3228 2718783 - 2718806 + r 81 -13.8 -2.98823 | opp_overlap 2718783 2718781 2718780 2718779, overlap 2718781 CCCACAAAAAATTCA GGCCCCTGCG TCAC CGCAGGAGCC TGTGTCTAAAGGCGG chvB 2727333 - 2718838 - | beta (1-->2) glucan biosynthesis protein TERM 3229 2724403 - 2724373 - G 74 -11 -3.51232 | opp_overlap 2724376, overlap 2724357 2724358 2724369 GTGTTCGGAAACGAA CAGCCGGTCTTCGG TTT CCGCCGACTGGCTG ACATACCAGGCAACG TERM 3230 2727108 - 2727128 + g 71 -6.8 -4.27965 | overlap 2727103 CGGCGTCGACGGCCG TCGTGCGG TAAAC CCGCAGGA TTTCCTTTTCGTTCT hipO 2727949 - 2729088 + | hippurate hydrolase TERM 3231 2729121 - 2729098 - T 100 -15.3 -4.53036 | opp_overlap 2729098 CGATAAACATGAAAA GGCCGGTCG GAGGAG CGACCGGCC TTTATTCTCAACTTG TERM 3232 2729098 - 2729121 + T 100 -15.3 -4.33248 | opp_overlap 2729098 CGATAAACATGAAAA GGCCGGTCG GAGGAG CGACCGGCC TTTATTCTCAACTTG Atu2733 2729343 - 2729155 - | hypothetical protein Atu2734 2729525 - 2730628 + | dehydrogenase ilvA 2731605 - 2730631 - | threonine dehydratase TERM 3233 2730758 - 2730735 - G 78 -6.6 -4.72272 | CCTTGCCATGAAAAA GCGCTGCGGC AAGC GCAACAGCAC CACCCGGCTCGATAA TERM 3234 2731721 - 2731689 - R 88 -11.5 -4.0896 | gap 1, opp_overlap 2731690 2731695 2731704, overlap 2731695 AAACCGCCTCCAAAA GA-AAAATCCCCGG TCCTGG CCGGGGATTTTGTC ATGTTCGGTCAGTGA TERM 3235 2731695 - 2731714 + r 95 -11.4 -4.55023 | opp_overlap 2731689 2731695, overlap 2731690 2731704 CCTCCAAAAGAAAAA TCCCCGGT CCTG GCCGGGGA TTTTGTCATGTTCGG TERM 3236 2731714 - 2731695 - R 100 -10.7 -5.45802 | opp_overlap 2731695 2731690 2731704, overlap 2731689 CCTCCAAAAGAAAAA TCCCCGG TCCTGG CCGGGGA TTTTGTCATGTTCGG ilvD 2733514 - 2731730 - | dihydroxy-acid dehydratase TERM 3237 2732027 - 2732078 + g 70 -5 -4.56597 | gap 1, opp_overlap 2732007, overlap 2732028 GATCGACGGGCTGTC CGCCGTT-CCCGACTGCCGACCGTC GCC GATCGTCGGCAGGCTGGTAATGCCC TTTTTCAGAAGCGCA TERM 3238 2732521 - 2732539 + g 73 -8.8 -3.85698 | opp_overlap 2732512, overlap 2732523 2732528 ACATGATGGCGGGCG TGCCGCCG GCG CGGTGGTA TTTCTCACCCAGCCA Atu2737 2734426 - 2733524 - | oxidoredutase TERM 3239 2734361 - 2734331 - G 71 -7.5 -4.18494 | gap 1, overlap 2734347 2734348 GACCTTTACCGAAAA GCCGGTA-CCCAGC AAAC GCCGGGCCATCGGC CCGCCCATCAGGCCC Atu2738 2735409 - 2734423 - | nucleoside-diphosphate-sugar epimerase TERM 3240 2736310 - 2736329 + G 70 -10.8 -3.53012 | GCTCGGCCTCAATTC GCTTGATG ACGC CATCAAGC TTTACCGCCGCGCCC Atu2739 2735603 - 2737045 + | oxidoreductase TERM 3241 2737084 - 2737057 - f 77 -8.5 -4.11304 | opp_overlap 2737061, overlap 2737061 2737074 CTAATCGAGAAATAA CAAAGGCGG TTTGAACACG CCGCCTTTG AAAACCCGCTGGCGG TERM 3242 2737077 - 2737061 - f 71 -4.4 -4.63048 | gap 1, opp_overlap 2737061, overlap 2737057 2737074 TCGAGAAATAACAAA GGCG-GT TTGA ACACGCC GCCTTTGAAAACCCG TERM 3243 2737124 - 2737089 - f 83 -9.7 -4.07568 | gap 1, overlap 2737074 CGCCGCCTTTGAAAA CCCGCTGGCGGCGA AGGAGGAAG TCGCTGCC-GCGGG AAAACGAACCAATCG TERM 3244 2737800 - 2737831 + G 71 -8.6 -4.09685 | TGCATCGCGAAATGT TGCGCTGGCGCGAG ATGC CATGCGTCAGCACA TTTTAGGCGCTGCCC Atu2740 2737162 - 2737878 + | GntR family transcriptional regulator Atu2741 2738082 - 2739242 + | hypothetical protein Atu2742 2739359 - 2739889 + | hypothetical protein Atu2743 2739894 - 2741171 + | hypothetical protein Atu2744 2741202 - 2742209 + | C4-dicarboxylate binding protein TERM 3245 2742228 - 2742261 + T 90 -16.9 -2.71712 | opp_overlap 2742233, overlap 2742233 TATCTGTATTGAATA AAAAACACCCGGAAG TTTG CTTCCGGGTGTTTTC GTTTGCGGAAAGAAA TERM 3246 2742256 - 2742233 - T 100 -16.8 -5.4833 | opp_overlap 2742228 2742233 GTATTGAATAAAAAA CACCCGGAAG TTTG CTTCCGGGTG TTTTCGTTTGCGGAA TERM 3247 2742233 - 2742256 + T 100 -16.8 -4.54727 | opp_overlap 2742233, overlap 2742228 GTATTGAATAAAAAA CACCCGGAAG TTTG CTTCCGGGTG TTTTCGTTTGCGGAA TERM 3248 2742298 - 2742273 - T 95 -14.1 -3.53012 | opp_overlap 2742278, overlap 2742278 TTTCGTTTGCGGAAA GAAAAGGCTGC CGAA GCAGCCTTTCC AGAAGATCAGGACGC TERM 3249 2742293 - 2742278 - T 100 -10.4 -4.86731 | opp_overlap 2742278, overlap 2742273 TTTGCGGAAAGAAAA GGCTGC CGAA GCAGCC TTTCCAGAAGATCAG TERM 3250 2742278 - 2742293 + T 74 -10.4 -3.53811 | opp_overlap 2742278 2742273 TTTGCGGAAAGAAAA GGCTGC CGAA GCAGCC TTTCCAGAAGATCAG acs 2744260 - 2742305 - | acetyl-CoA synthetase TERM 3251 2744470 - 2744448 - H 76 -12.6 -2.74192 | overlap 2744445 CAGTGGTTAATACCA CGCCCGCGAC CCC GGCGCGGACG GACAGAAGGACTGTA Atu2746 2744507 - 2745193 + | hypothetical protein TERM 3252 2745218 - 2745235 + T 100 -9.8 -5.79595 | opp_overlap 2745218 TTCCGACATTTGAAA CCCGGC CGCCGT GCCGGG TTTTTTGTTTTCAGG TERM 3253 2745235 - 2745218 - T 74 -9.8 -3.63627 | opp_overlap 2745218 TTCCGACATTTGAAA CCCGGC CGCCGT GCCGGG TTTTTTGTTTTCAGG Atu2747 2745916 - 2745254 - | hypothetical protein TERM 3254 2745560 - 2745548 - G 84 -9.1 -4.53303 | opp_overlap 2745556 GACCTGCACATAAAA CCGCA GGC TGCGG CCCTGTCTGGCGCAT TERM 3255 2745689 - 2745701 + g 72 -2.7 -4.86731 | overlap 2745686 GATCAGATGCAGTTC GATAT CGG ATGTC TTTTCTTTGAGCGCA TERM 3256 2745834 - 2745853 + g 70 -4.2 -4.57073 | gap 1, opp_overlap 2745827 GCAACCAAGGCAACA TCC-GCCGC CTT GCGACCGGA TTTTTCCGCGACATC TERM 3257 2746411 - 2746390 - g 71 -9.5 -3.8211 | gap 1, overlap 2746405 GGCTATGCAGAACAA GGTCCA-TCC CAA GGACTGGACC TACCAGAACATCGCC leuS 2746106 - 2748736 + | leucyl-tRNA synthetase TERM 3258 2748801 - 2748822 + G 73 -9.4 -3.86194 | gap 1 ATGGCTGGTCTTCTG GCGGGCTGC CAGGT GC-GCCCGC TTTATGGCGAAGCTT Atu2749 2748783 - 2749274 + | hypothetical protein TERM 3259 2749308 - 2749349 + G 88 -6.4 -4.96762 | overlap 2749315 AGATAAAGTCCCATG AGTTCGAGCGCTTCGCCG AAAATC CGGCGGAGCGCTTTCGCG TTTTTGTGCTCTATG TERM 3260 2749315 - 2749342 + G 95 -16.3 -3.82067 | overlap 2749308 GTCCCATGAGTTCGA GCGCTTCGCCG AAAATC CGGCGGAGCGC TTTCGCGTTTTTGTG TERM 3261 2749964 - 2749978 + G 70 -4.2 -4.56597 | opp_overlap 2749964 GACGCCATCCTGAAA GGCG ACAGGAA CGCC TTTTTCCACGCCACC Atu2750 2749286 - 2750323 + | DNA polymerase III subunit delta TERM 3262 2750356 - 2750332 - T 100 -12.2 -5.72622 | gap 1, opp_overlap 2750332 TGGATAAACAAAAAA GCCCTCG-TGC TGAT GCAACGAGGGC TTTTCGAATTTTGAT TERM 3263 2750332 - 2750356 + T 93 -12.2 -4.28651 | gap 1, opp_overlap 2750332 TGGATAAACAAAAAA GCCCTCG-TGC TGAT GCAACGAGGGC TTTTCGAATTTTGAT fdxA 2750726 - 2750388 - | ferredoxin Atu2752 2751300 - 2750884 - | hypothetical protein TERM 3264 2750923 - 2750937 + g 100 -11.4 -5.14563 | AGACAGAAACCTGTC GAGCGC CCT GCGCTC TTTTTTCGTCGGACG mgpS 2754403 - 2751305 - | ATP-dependent helicase TERM 3265 2752421 - 2752401 - G 71 -6.7 -4.1585 | overlap 2752392 2752405 TGATAAGCGCCAAAA CGCACGCCG TAG CGGCGCATG GAGGCGCGCGCATCC TERM 3266 2753627 - 2753607 - G 72 -12.5 -3.04144 | opp_overlap 2753618 2753619, overlap 2753610 GTGCCATCGCGAAGA TGACGGCCG GCG CGGCCGGCA ATCTGGCCGATTTCA TERM 3267 2753903 - 2753891 - G 76 -9.1 -4.07568 | opp_overlap 2753890, overlap 2753875 CTCTTCCGCCGAAAA GGCGA CGA TCGCC GTACGTTGTGGCAGG TERM 3268 2753966 - 2753950 - G 89 -5 -5.24129 | opp_overlap 2753961, overlap 2753952 GGCCCGCATAAAAAA GCTGCG ACAGG CGCGGC CGCTCGACCACGGTT TERM 3269 2754737 - 2754768 + r 72 -12.4 -2.84878 | opp_overlap 2754735 2754733, overlap 2754737 GCCCCATACCAGATT GTGAATCCGGGTAA GTCC TTGCCCGGATTCAG CTTTCCATTCCCGGA TERM 3270 2754737 - 2754769 + r 83 -12.2 -3.75153 | gap 1, opp_overlap 2754735 2754733, overlap 2754737 GCCCCATACCAGATT G-TGAATCCGGGTAA GTCC TTGCCCGGATTCAGC TTTCCATTCCCGGAA TERM 3271 2754884 - 2754857 - R 79 -11.2 -3.64822 | opp_overlap 2754856 2754857, overlap 2754875 AGGGTCCCAGTCAAA GCGCCTCGCC GGCAAGAA GGCGCGGCGC ATTTGCATCCGTCGT Atu2755 2756066 - 2754852 - | 2-octaprenyl-6-methoxyphenyl hydroxylase TERM 3272 2755136 - 2755092 - G 75 -14.2 -2.90219 | opp_overlap 2755093 GAGAACGTTGAGAGA GCCGATATCGAGGCCGAGAC GGTCG GCCTCGACCACGGTTTCGGC AAGCGCCGCCACATC TERM 3273 2755093 - 2755129 + g 79 -12.2 -3.53012 | opp_overlap 2755092 AGAACGTTGAGAGAG CCGATATCGAGGCCGA GACGG TCGGCCTCGACCACGG TTTCGGCAAGCGCCG TERM 3274 2756448 - 2756471 + G 80 -3.1 -5.1287 | gap 1 GCACCCGCCGCGTGG TCGCCAT-CC AGCAC GGCAAGGCGA TTTTTTCCATGTCGG tesB 2756153 - 2757037 + | acyl-CoA thioesterase II glnK 2757251 - 2757601 + | nitrogen regulatory protein PII amtB 2757775 - 2758980 + | ammonium transporter TERM 3275 2759022 - 2759039 + F 100 -14.1 -5.28942 | opp_overlap 2759022 CCTCTCCCGCAAGAA GGCCCGC TCCG GCGGGCC TTTTTCTTTGCCGTA TERM 3276 2759039 - 2759022 - f 95 -14.1 -3.61398 | opp_overlap 2759022 CCTCTCCCGCAAGAA GGCCCGC TCCG GCGGGCC TTTTTCTTTGCCGTA TERM 3277 2759109 - 2759077 - f 73 -5 -4.56597 | opp_overlap 2759098, overlap 2759078 2759079 GCTCGGCCTCAAAAA GC-CGCATGGTTAACA CGA CATTAACCA-GCGAGC GGTTAGTTTTCCCTG TERM 3278 2759219 - 2759248 + G 81 -5.7 -4.7497 | gap 1, overlap 2759220 TCTCCGACATTCGAT GGTCGTCACACGCG CTT CGTGT-TGACGGCG TTTTTCGTGCGTCAG TERM 3279 2760994 - 2760982 - g 76 -6.2 -4.62783 | CACCGATCCGAAAAA GGCC GTTGT GGCC CTGAAATGGACCGTG ftsK1 2759189 - 2761864 + | putative ftsK cell division protein Atu2760 2761964 - 2762638 + | hypothetical protein TERM 3280 2762668 - 2762685 + F 100 -6.9 -5.79595 | opp_overlap 2762668 ACAAGCTCTTTAAAA GGCGGCT CTCA GGTCGCC TTTTTTATTTTGCCG Atu2761 2762799 - 2763602 + | exodeoxyribonuclease III Atu2762 2764073 - 2763618 - | hypothetical protein TERM 3281 2763737 - 2763714 - G 71 -9.6 -3.74693 | GGCGACCTCAGGAAA CTCCTCCACC AGCC GGTGAAAGAG GATGCGCGTTATCCG TERM 3282 2764150 - 2764187 + r 74 -10.5 -3.59262 | gap 1, opp_overlap 2764144 2764154, overlap 2764150 AAAATACAAGACGTT G-AAACGCCGCGCATCCT TTC AGGAGGCGCGGCGTGAGC TTTGCGGCTATGAAC TERM 3283 2764182 - 2764154 - R 100 -20.3 -3.61774 | opp_overlap 2764150 2764150, overlap 2764144 TACAAGACGTTGAAA CGCCGCGCATCCT TTC AGGAGGCGCGGCG TGAGCTTTGCGGCTA mtrA 2764896 - 2764213 - | two component response regulator TERM 3284 2764427 - 2764439 + g 81 -7.7 -4.6759 | overlap 2764434 ATCGCCGCTTCCTTT TCCGT GAG ACGGA TTTTCTTGCCGTCTT Atu2764 2765173 - 2765583 + | hypothetical protein TERM 3285 2765637 - 2765607 - T 84 -12.7 -3.3782 | opp_overlap 2765614, overlap 2765614 CAGCGAGGCAAGCAA CAAAAAACCCGCC ATCAA GGCGGGTTTTTTT AGAAGGAAAAGGCCG TERM 3286 2765630 - 2765614 - T 100 -10.8 -5.5604 | opp_overlap 2765614, overlap 2765607 GCAAGCAACAAAAAA CCCGCC ATCAA GGCGGG TTTTTTTAGAAGGAA TERM 3287 2765614 - 2765630 + T 100 -10.8 -5.40072 | opp_overlap 2765607 2765614 GCAAGCAACAAAAAA CCCGCC ATCAA GGCGGG TTTTTTTAGAAGGAA Atu2765 2766225 - 2765656 - | CarD family transcriptional regulator TERM 3288 2771389 - 2771375 - g 84 -5.6 -4.87291 | TATGCGAAGGAAAAA GACCCG GTT CAGGCC TGGTATGCGGCTGAC gdh 2766767 - 2771524 + | NAD-glutamate dehydrogenase TERM 3289 2771568 - 2771540 - f 100 -12.3 -4.66833 | GCGGAATCTCAAAAA CGTCATCCGGGCC ATC GACCCGGGTGGCG ACCAACGACGTGAAC Atu2767 2771626 - 2773002 + | hypothetical protein Atu2768 2773636 - 2773061 - | hypothetical protein TERM 3290 2773758 - 2773768 + H 73 -5.4 -4.58283 | GCAACAGTTTGTTTT TTGC GCA GCAA TTTTTCGAAAGATTC phbA 2773879 - 2775060 + | acetyl-CoA acetyltransferase TERM 3291 2775381 - 2775370 - g 76 -7.2 -4.56367 | opp_overlap 2775369 CATTCCAGAAAGAAA CCGG CATC CCGG CGTTTCAGTGGGATG phbB 2775231 - 2775956 + | acetoacetyl CoA reductase; poly-beta-hydroxybutyrate biosynthesis TERM 3292 2776349 - 2776366 + F 70 -6.9 -4.10007 | opp_overlap 2776348 2776349 TGCCATGGAAAAACG CGGTCGC TGCT GCGGCTG TTTTCCGACCGTTGT TERM 3293 2776528 - 2776543 + G 74 -3.2 -4.84359 | overlap 2776529 ACAAAAGTCATCGAG CGGCTT AACG AAGCCC TTTTTCTAGAACTCG bfr 2776477 - 2776986 + | bacterioferritin TERM 3294 2777030 - 2777003 - T 75 -12.8 -2.57344 | opp_overlap 2777009, overlap 2777009 CACTGGCGCCAGAAC GAAAAAGGCGGC CTTG GCCGCCTTTTTT ATTTGCCCGAAAGGT TERM 3295 2777009 - 2777024 + T 100 -11.8 -5.63517 | opp_overlap 2777009 2777003 CGCCAGAACGAAAAA GGCGGC CTTG GCCGCC TTTTTTATTTGCCCG TERM 3296 2777024 - 2777009 - T 100 -11.8 -4.93365 | opp_overlap 2777009, overlap 2777003 CGCCAGAACGAAAAA GGCGGC CTTG GCCGCC TTTTTTATTTGCCCG ialA 2777541 - 2777029 - | dinucleoside polyphosphate hydrolase Atu2773 2778787 - 2777588 - | hypothetical protein TERM 3297 2778497 - 2778463 - G 71 -5.7 -4.30719 | gap 1, opp_overlap 2778480, overlap 2778464 GCCGGGGAGAATAAA CCGATACGACATTGCC ATCG GGCAAGGTCGC-CCGA TTGATATTGGCGCCG TERM 3298 2778559 - 2778574 + g 70 -4.7 -4.57341 | TGTCACCGGCAGCAG GCACA TCGACC TGTGC TTTTTCAGGGGCCTT TERM 3299 2778722 - 2778741 + g 100 -15 -5.60993 | opp_overlap 2778722 CATAATGACGGAAAA GCGCCGGT TGAT ACCGGCGC TTTTTTTCTGACGAC TERM 3300 2778741 - 2778722 - G 100 -15 -4.24963 | opp_overlap 2778722 CATAATGACGGAAAA GCGCCGGT TGAT ACCGGCGC TTTTTTTCTGACGAC Atu2774 2780178 - 2778850 - | carboxy-terminal protease TERM 3301 2779165 - 2779149 - G 71 -6.5 -4.15222 | ACGGCGTGTAATAAA GCGCC GTGGTCA GGCGC AACGCGCCCGCTTCA Atu2775 2781565 - 2780168 - | hypothetical protein TERM 3302 2780626 - 2780636 + g 72 -2.4 -4.84017 | CGAAGGGATATGCGG GCGC AAT GCGG TTTTTATCGGGCATT Atu2776 2782207 - 2781725 - | SPOUT methyltransferase superfamily protein Atu2777 2782854 - 2782366 - | hypothetical protein nadD 2783489 - 2782905 - | nicotinic acid mononucleotide adenylyltransferase proA 2784773 - 2783532 - | gamma-glutamyl phosphate reductase proB 2785980 - 2784811 - | gamma-glutamyl kinase cgtA 2787044 - 2785977 - | GTPase ObgE TERM 3303 2786141 - 2786151 + g 75 -8.2 -4.21768 | overlap 2786132 GCAGGAGCGGCGGAC GGCC GCA GGCC TTTTCCAGTTCCTTA TERM 3304 2787176 - 2787204 + r 74 -10.3 -3.55444 | opp_overlap 2787179 2787180, overlap 2787180 AGCCCCTGCGCGGGA CAAGGCCGGTTTG CTT TAAACCGGCTTCG TTTAACGCCTCGGGC TERM 3305 2787180 - 2787200 + r 81 -11.9 -3.51708 | opp_overlap 2787179 2787180, overlap 2787176 CCTGCGCGGGACAAG GCCGGTTTG CTT TAAACCGGC TTCGTTTAACGCCTC Atu2782 2787849 - 2787259 - | acetyltransferase TERM 3306 2787360 - 2787372 + g 73 -4.7 -4.72272 | overlap 2787347 GGTGGCAGCCGGTCA CCCGG AAG CCGAG TTTTTCCTGCACACG TERM 3307 2787470 - 2787454 - G 74 -5.8 -4.57073 | gap 1, opp_overlap 2787462 CATGCGGCGGAAAAA CCGCTCG ACCA CG-GCGG CCACTGCCTCGGTCA TERM 3308 2787547 - 2787508 - G 75 -7.7 -4.25104 | CTTGCCCCAGTAAAA GCGGTTCAGCCAGTAGC CGAGAT GCCACTCGCCGTGCCGC AACTCCACCGAGACG Atu2783 2788478 - 2787846 - | acetyltransferase TERM 3309 2788544 - 2788504 - R 89 -13.5 -3.53012 | gap 1, opp_overlap 2788504 2788508 2788510, overlap 2788510 CTCCTTGGGGGTAAA GAAAA-AGGGGAGTTGGG TGGTGC CCCATCTCCCCTGTTTTC TTGACTGAACCTGAT TERM 3310 2788504 - 2788544 + r 84 -13.5 -3.06302 | gap 1, opp_overlap 2788504 2788510, overlap 2788508 2788510 CTCCTTGGGGGTAAA GAAAA-AGGGGAGTTGGG TGGTGC CCCATCTCCCCTGTTTTC TTGACTGAACCTGAT TERM 3311 2788508 - 2788539 + r 91 -10.1 -4.67982 | opp_overlap 2788504 2788510, overlap 2788504 2788510 TTGGGGGTAAAGAAA AAGGGGAGTTGGG TGGTGC CCCATCTCCCCTG TTTTCTTGACTGAAC TERM 3312 2788537 - 2788510 - R 100 -12.7 -5.27335 | opp_overlap 2788508 2788504 2788510, overlap 2788504 GGGGGTAAAGAAAAA GGGGAGTTGGG TGGTGC CCCATCTCCCC TGTTTTCTTGACTGA TERM 3313 2788510 - 2788537 + r 93 -12.7 -3.95554 | opp_overlap 2788510 2788504, overlap 2788508 2788504 GGGGGTAAAGAAAAA GGGGAGTTGGG TGGTGC CCCATCTCCCC TGTTTTCTTGACTGA rpmA 2788879 - 2788610 - | 50S ribosomal protein L27 rplU 2789234 - 2788920 - | 50S ribosomal protein L21 Atu2786 2789567 - 2790007 + | hypothetical protein TERM 3314 2789984 - 2790024 + T 74 -9.7 -3.71848 | gap 2, opp_overlap 2789980 2789989, overlap 2789992 ATCGAAGAAAGCGCA GACGAGGCCGCGGCGGAGC GATAG GC-CCGCCGCG-TTGCGTC TTATTGCTCGCCGAG TERM 3315 2789992 - 2790017 + T 95 -14 -3.24825 | gap 1, opp_overlap 2789980 2789989, overlap 2789984 AAGCGCAGACGAGGC CGCGGCGGAGC GATAG GC-CCGCCGCG TTGCGTCTTATTGCT Atu2787 2790231 - 2790025 - | hypothetical protein citE 2791112 - 2790228 - | citrate lyase, beta subunit Atu2789 2791250 - 2791480 + | hypothetical protein TERM 3316 2791522 - 2791510 - f 73 -10.5 -3.34043 | GTCAGGATGCGATAA CGCCC GAC GGGCG TACCGAAGAATGCGG leuD 2791645 - 2792250 + | isopropylmalate isomerase small subunit TERM 3317 2792269 - 2792310 + F 86 -14.6 -2.93853 | opp_overlap 2792274, overlap 2792274 CATTTCCGCTCTTCA AAAAAGCCGATCCCGTAC CAAACC GTACCGGATCGGCTTTTG CTTTGCTTGAAAAGC TERM 3318 2792305 - 2792274 - f 100 -14.5 -5.00616 | opp_overlap 2792269 2792274 CCGCTCTTCAAAAAA GCCGATCCCGTAC CAAACC GTACCGGATCGGC TTTTGCTTTGCTTGA TERM 3319 2792274 - 2792305 + F 100 -14.5 -4.62054 | opp_overlap 2792274, overlap 2792269 CCGCTCTTCAAAAAA GCCGATCCCGTAC CAAACC GTACCGGATCGGC TTTTGCTTTGCTTGA leuB 2792472 - 2793584 + | 3-isopropylmalate dehydrogenase Atu2792 2794698 - 2793565 - | hypothetical protein TERM 3320 2793596 - 2793628 + g 75 -13.3 -2.90496 | opp_overlap 2793595 2793594, overlap 2793594 GTAACGCTTAAAACG GGCTGGGCAGTTGGC GCC GCCGTCTGCCCGTCC TCCTTTGGCAGAAGA TERM 3321 2794909 - 2794924 + r 74 -4.6 -4.80882 | overlap 2794910 ACCGGATATGGGTAA CCGGAG CTCA CTCCGC TTTTTCATATCCCAT cobB 2796351 - 2795035 - | cobyrinic acid a,c-diamide synthase TERM 3322 2796016 - 2796046 + g 76 -8.8 -4.07568 | opp_overlap 2796015 CGGAATGCGGAACAG CCGCGCCAGATCCG CCG CCGAGCCGGTGCGG TTTTCCGCCACGGGA cobA 2797136 - 2796348 - | uroporphyrin-III C-methyltransferase TERM 3323 2797181 - 2797171 - H 90 -8.2 -4.68994 | overlap 2797160 ACGATGACGGAAAAA GCCG TCC CGGC TATAGGAATGCATAT cbiD 2797189 - 2798325 + | cobalt-precorrin-6A synthase cobM 2799053 - 2798280 - | precorrin-4 C11-methyltransferase chiG 2799487 - 2799050 - | cobalamin biosynthesis protein TERM 3324 2799328 - 2799344 + g 74 -11.5 -3.53224 | TCGCCGCCTCCGCAA GGCCGGC CTC GTCGGCC TTTAGCGGCGCAGTC cobL 2800722 - 2799463 - | precorrin-6y methyltransferase cobK 2800721 - 2801503 + | cobalt-precorrin-6x reductase cobJ 2802231 - 2801470 - | precorrin-3B C17-methyltransferase TERM 3325 2801769 - 2801784 + g 73 -4.6 -4.68593 | opp_overlap 2801759, overlap 2801771 CGAATCCGGCTTCGG CCGCTG CAAT CAGCCG TTTTTCGATAATGCC TERM 3326 2801844 - 2801863 + g 70 -10 -3.53012 | gap 1, opp_overlap 2801843 TGGCGCAGAAATCAT GGCCGAGTG GCG CAC-CGGCC TTTGCAGCGACGGCG cobI 2802995 - 2802228 - | precorrin-2 C(20)-methyltransferase TERM 3327 2802743 - 2802726 - G 80 -10.5 -4.015 | opp_overlap 2802734 2802739 GGACTGATCAAAGAA CGCGGCA ATCG CGCCGCG ATAATCTTCGCCGTT cbiC 2803624 - 2802992 - | precorrin-8X methylmutase TERM 3328 2803151 - 2803171 + g 81 -8.1 -4.60924 | opp_overlap 2803135 CGGCATACCGATGAT GGCAGCCGG ACG CGGGCCGCC TTTTTCCAGCATTTC cobG 2804976 - 2803621 - | cobalamin biosynthesis associated protein TERM 3329 2803801 - 2803770 - G 77 -8.6 -4.35524 | gap 1, overlap 2803772 GCTCGAAAGGCAAAA TCCCGGCTG-GCGGG TCA CCGGCGCGGCCGGAA ATCGAGAATGCCAGG TERM 3330 2803984 - 2803967 - G 85 -9.1 -4.63218 | gap 1 TGCGTGTGAAGAAAA GCCGAGGC ACA GCC-CGGC GCGCCGGAACAGACC TERM 3331 2804596 - 2804607 + g 76 -7.2 -4.52047 | overlap 2804589 GTCATGCAGCGCCAG GGCG CCAG CGCC TTTTCTAATCTCCTC cobN 2808326 - 2804976 - | cobaltochelatase TERM 3332 2805300 - 2805330 + g 75 -13.2 -2.95774 | opp_overlap 2805289 GAAACGCGGATTGAC GGCGCGGGCGCG CACCACC CGCGTCAGCGCC TGTGTCATCGATCTG cobW 2809428 - 2808391 - | cobalamin synthesis protein TERM 3333 2809349 - 2809364 + g 70 -4.6 -4.56597 | opp_overlap 2809349 AGCTTTTCGAGAAGA CCGCGC AGCA GTGTGG TTTTTCCGGCACCCA Atu2806 2809883 - 2809425 - | hypothetical protein TERM 3334 2809461 - 2809479 + g 73 -10.2 -3.60792 | ATCGAATGGGGGAAT GCGCGCCA GCA TGCCGCGC TTTAGGGGTTCCGGG cobO 2810321 - 2810938 + | cob(I)alamin adenosyltransferase TERM 3335 2811994 - 2811970 - g 70 -4.9 -4.57837 | overlap 2811971 AGATGCTTGGAAAAA CCGTTGCCG ATCCTGA CGGCATCGA GGGACCGCCGGCGAC cbiP 2810940 - 2812397 + | cobyric acid synthase cobD 2813349 - 2812384 - | cobalamin biosynthesis protein TERM 3336 2812640 - 2812653 + gF 83 -9.5 -4.07568 | GCATCGCGACGGATC GCGGC AATG GCCGC TTTTGGCGACGCGCC TERM 3337 2812706 - 2812682 - Gf 100 -6.3 -5.60993 | overlap 2812696 2812698 CCTTCGACAAAAAAA GCGGCGACC ACAAACA GGCTGCCGC TCAGCCTTGAGGCCG TERM 3338 2813193 - 2813160 - Gf 78 -4.5 -4.84359 | gap 1, opp_overlap 2813168, overlap 2813164 2813167 TTAGCCCGACAAAAA CAAC-CAGCGCCGCAA CAC CTGCGGCTTTGCGCTG AGAAAATGATGCGCT TERM 3339 2813382 - 2813372 - gR 88 -6.8 -4.93898 | ACAGTACCAGAAAAA GCTC AGG GAGC GATCCGTCACGGCGG TERM 3340 2814338 - 2814369 + Gr 76 -10.2 -3.67296 | gap 1, overlap 2814341 CCCGGCAGCGAAGCG GATTGGCAGCGCGTC GAA GAGGCGCTGC-GATC TTTCGATCACTCCTC TERM 3341 2814341 - 2814367 + Gr 73 -10.8 -3.41569 | overlap 2814338 GGCAGCGAAGCGGAT TGGCAGCGCGTC GAA GAGGCGCTGCGA TCTTTCGATCACTCC cobC 2813348 - 2814394 + | cobalamin biosynthetic protein Atu2811 2815578 - 2814376 - | hypothetical protein Atu2812 2816019 - 2815690 - | hypothetical protein uxaB 2817164 - 2816031 - | altronate oxidoreductase TERM 3342 2817135 - 2817124 - G 85 -7.2 -4.77165 | TGGGCGAGAAGAAAA CGGC TGGT GCCG AATTGCAGGATGGGC Atu2814 2818171 - 2817161 - | zinc-binding dehydrogenase TERM 3343 2817262 - 2817274 + g 71 -9.1 -3.75153 | TGCGATGGGTGATTA GTGCC TCC GGCAC TTTCCCTTCGCGCAA Atu2815 2818996 - 2818175 - | hypothetical protein Atu2816 2820014 - 2819001 - | oxidoreductase rbsB 2821049 - 2820108 - | ABC transporter, substrate binding protein (ribose) rbsC 2822148 - 2821126 - | ABC transporter, membrane spanning protein (ribose) rbsA 2823674 - 2822157 - | ABC transporter, nucleotide binding/ATPase protein (ribose) TERM 3344 2823358 - 2823334 - G 76 -7 -4.46212 | overlap 2823335 2823336 CGGTCCACGAGAAAA CCCCGGCGCG GCTCA CGCGCCAGAT AAATGTTCTCGGCAA Atu2821 2823977 - 2824669 + | GntR family transcriptional regulator TERM 3345 2825932 - 2825969 + G 77 -14.8 -2.80821 | overlap 2825927 ACCCGGCTATGACCC CGTTGCCGTCACCGGC CAGGTT GCCGGCGGCTGCAACG TCATCTGTTTCACCA garD 2824712 - 2826244 + | D-galactarate dehydratase TERM 3346 2826278 - 2826301 + T 100 -16.8 -3.36538 | opp_overlap 2826278, overlap 2826270 CCACGTGAAACAAAA GGCCCGGAAA TCAC TTTCCGGGCC TTCGTCATTTCTGTC TERM 3347 2826301 - 2826278 - T 100 -16.8 -4.88918 | opp_overlap 2826278 2826270 CCACGTGAAACAAAA GGCCCGGAAA TCAC TTTCCGGGCC TTCGTCATTTCTGTC purH 2827945 - 2826329 - | bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase TERM 3348 2826511 - 2826488 - G 70 -5.2 -4.51196 | gap 1, overlap 2826502 CGCAAACGGATAAAA GGCTTCCGACG CAA CGGCAG-AGCC GCGCGTCAATGGTTC TERM 3349 2827407 - 2827395 - G 76 -9.1 -4.07568 | GCCTTGGCGGCAAAA CGCTG GCG CAGCG CATAGGAGGTCTGTC Atu2824 2829738 - 2828098 - | hypothetical protein TERM 3350 2828621 - 2828646 + g 81 -13.3 -3.37245 | gap 1, overlap 2828622 AGCGTGACGGTGGAA TGCGCC-GCCGT GGA ACGGCTGGCGCG TTGATATTCCGGTGC TERM 3351 2828622 - 2828645 + g 76 -14.6 -2.62026 | gap 1, overlap 2828621 GCGTGACGGTGGAAT GCGCC-GCCGT GGA ACGGCTGGCGC GTTGATATTCCGGTG TERM 3352 2829556 - 2829544 - G 73 -10.5 -3.6215 | opp_overlap 2829544 2829543 GTAATCTACCTGAAA CGGCG AAG CGCCG CCGGTTTCAACGACG sun 2831276 - 2829891 - | Sun protein TERM 3353 2831214 - 2831197 - G 79 -12.7 -3.45571 | opp_overlap 2831175 2831196 2831181, overlap 2831191 TCCTCGAAAGACGAA GGGCCGT CTTC ACGGCCC CTTGCATGCGCTGGC htpx 2832238 - 2831273 - | heat shock protein HtpX TERM 3354 2831419 - 2831429 + g 75 -8.2 -4.28254 | overlap 2831408 CCATCGCGTGCAGCG CCGC CAC GCGG TTTTCCGTGTTCGGA Atu2827 2832355 - 2832567 + | hypothetical protein TERM 3355 2832603 - 2832585 - T 100 -14.6 -4.67038 | opp_overlap 2832585 GCCGCAAAACGAAAA TACCCGCC TTT GGCGGGTA TTTATCAATTAAAAC TERM 3356 2832585 - 2832603 + T 100 -14.6 -3.97368 | opp_overlap 2832585 GCCGCAAAACGAAAA TACCCGCC TTT GGCGGGTA TTTATCAATTAAAAC parB1 2833510 - 2832629 - | chromosome partitioning protein parA 2834334 - 2833540 - | chromosome partitioning protein gidB 2834971 - 2834354 - | glucose-inhibited division protein B gidA 2836866 - 2834983 - | tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA TERM 3357 2836588 - 2836609 + g 78 -6.5 -4.66833 | gap 1, overlap 2836589 GTCAGCTTGCGTGCG CGGCCCA-CG AAC CGCTGGGCCC TTTTTCCGGTTGAGC thdF 2838257 - 2836929 - | tRNA modification GTPase TrmE TERM 3358 2838309 - 2838284 - R 71 -10.4 -3.28785 | opp_overlap 2838284, overlap 2838279 2838277 GTCTAAAACAGTCAA GCCGCACCCG AATGAA CGGATACGGC TTTAAAGCTCTTATG rho 2839612 - 2838347 - | transcription termination factor Rho Atu2834 2840295 - 2839798 - | hypothetical protein TERM 3359 2840192 - 2840166 - G 80 -3.6 -5.08824 | opp_overlap 2840188, overlap 2840184 GCGGCAGGTAAAAAA TCGCAGCCATCC ATG AGATCACGGCGA TGATATGCAGCGCCT TERM 3360 2840362 - 2840388 + r 83 -9.5 -4.13282 | gap 2, opp_overlap 2840361 GCACCCCCAACCGAG CG-CACCC-GCTG CAC CAGCCGGGTGACG TTTTCCGGGTCTGCT hemE 2841374 - 2840340 - | uroporphyrinogen decarboxylase SEQUENCE gi|159185562|ref|NC_003063.2| Agrobacterium tumefaciens str. C58 chromosome linear, complete sequence (length 2075577) Atu3000 630 - 905 + | hypothetical protein Atu3001 1656 - 943 - | hypothetical protein Atu3005 2585 - 2986 + | hypothetical protein Atu3006 4811 - 3393 - | hypothetical protein TERM 1 4135 - 4105 - G 100 -8.3 -5.88197 | overlap 4106 4126 4128 4129 GCAAATATAAAAAAA TTGCGACGCCTTT CCGTT AAAGACGCCGCAG CGGCAGCGGCTAGGG TERM 2 4134 - 4106 - G 84 -11.8 -4.10478 | overlap 4105 4126 4128 4129 CAAATATAAAAAAAT TGCGACGCCTTT CCGTT AAAGACGCCGCA GCGGCAGCGGCTAGG Atu3007 5085 - 4831 - | hypothetical protein Atu3008 5178 - 5372 + | hypothetical protein TERM 3 6089 - 6099 + G 84 -3.2 -5.19879 | opp_overlap 6086 TTTGCCATAGGAGCA GCAT TTG GTGC TTTTTATGTTTCGAG exoZ 5510 - 6577 + | exopolysaccharide production protein Atu3010 7527 - 6604 - | hypothetical protein TERM 4 7191 - 7169 - G 79 -9.1 -4.2349 | opp_overlap 7168 TCCGCAGACTGAAAA TCGGCAGTG ACCAG CGCTGCCGA CTGGGTTACGCCGCC Atu3011 7880 - 7524 - | ArsR family transcriptional regulator Atu3012 8782 - 8093 - | hypothetical protein TERM 5 8491 - 8479 - G 84 -3.3 -5.26918 | ACACTGCATAAAAAA CCCGA AGA TCGCG GCAAGCATCAACAAA Atu3013 9344 - 8940 - | hypothetical protein TERM 6 9089 - 9062 - G 84 -10.5 -4.22948 | opp_overlap 9061 9073, overlap 9055 AAAAGTCAGGCAAAA CACCGGTACGG GTCCCG CCGCCCCGGTG ATACTTGGTAAAGGC TERM 7 9155 - 9139 - G 71 -6.5 -4.25104 | GCTGCGCGAGGAAAA GGGGTGA ACT TCAACCC CGCCTGATCAACAAA Atu3014 9604 - 9341 - | hypothetical protein TERM 8 9586 - 9613 + g 74 -11.4 -3.54012 | opp_overlap 9592 TCATGTCAAATTTCC GTAATACCGTCG TAAC CAACGGTATTAC TTCTGTGCCTCCTTT Atu3015 9998 - 10549 + | hypothetical protein gpmB 10589 - 10888 + | phosphoglyceromutase Atu3017 10885 - 11178 + | phosphoglyceromutase TERM 9 11463 - 11473 + G 78 -2.4 -5.1287 | ACGCGACGCGGCTTG CCGC CCG GCTG TTTTTTGACTGTACG Atu3018 11249 - 11632 + | hypothetical protein Atu3019 12239 - 11703 - | hypothetical protein TERM 10 12193 - 12181 - G 78 -4.7 -4.82154 | AATGCAGAGCAAAAA CTGCC GAT GGCCG ATACCTCAAGATACC Atu3020 12671 - 13381 + | GntR family transcriptional regulator Atu3021 13412 - 14527 + | ABC transporter, nucleotide binding/ATPase protein (sugar) Atu3022 14524 - 15453 + | ABC transporter, membrane spanning protein (sugar) Atu3023 15465 - 16346 + | ABC transporter, membrane spanning protein (sugar) TERM 11 16648 - 16675 + G 74 -12 -3.5394 | opp_overlap 16640, overlap 16636 16649 16651 CAGGCAACCTTCCCG ACATCGTTGGCG GTGA CGCCAACGGTGG TTTGAAGGAGGATTT TERM 12 16649 - 16674 + G 79 -15.5 -2.72043 | opp_overlap 16640, overlap 16648 16636 16651 AGGCAACCTTCCCGA CATCGTTGGCG GTGA CGCCAACGGTG GTTTGAAGGAGGATT TERM 13 16651 - 16672 + G 70 -12.3 -2.90496 | opp_overlap 16640, overlap 16649 16648 16636 GCAACCTTCCCGACA TCGTTGGCG GTGA CGCCAACGG TGGTTTGAAGGAGGA TERM 14 17759 - 17745 - g 81 -5.6 -4.73388 | AACGCCGAGGAAAAA GCGACC TTC GACCGC TACTGGCCTAGCATC Atu3024 16407 - 17936 + | ABC transporter, membrane spanning protein (sugar) TERM 15 17949 - 17974 + F 80 -10.4 -3.8802 | overlap 17950 17952 TAAACCCTCCGACCA TGATGGCGGC CTTGTC GCCGCCATCC TTTCCCTTCTGTTTT TERM 16 17950 - 17973 + F 81 -13.9 -2.91185 | overlap 17949 17952 AAACCCTCCGACCAT GATGGCGGC CTTGTC GCCGCCATC CTTTCCCTTCTGTTT TERM 17 18224 - 18210 - g 100 -2.1 -5.76633 | gap 1, opp_overlap 18218, overlap 18211 18212 TTACAGACAAAAAAA CGCTCG TCTT CGAG-G ATCTCGCCTGGAATT TERM 18 18412 - 18375 - g 89 -12.5 -4.10429 | overlap 18365 AAGCACTGCCGAAAA CGCCGCTGCCCGGCAGG TCTG CCCGCCATGCTGCCGCG CAAACCAGCCACCCT TERM 19 18544 - 18521 - g 85 -6.6 -4.72986 | overlap 18522 GAGTTTTACGAAAAA TCGGTCGAGC CGTG GCTCGAGCGG CCGGTCATGCCGGAA TERM 20 18543 - 18522 - g 70 -10.1 -3.4331 | overlap 18521 AGTTTTACGAAAAAT CGGTCGAGC CGTG GCTCGAGCG GCCGGTCATGCCGGA TERM 21 19485 - 19496 + G 71 -7.2 -4.23723 | CTCCCGCCGACCTGC CGGC ACTC GCCG TTTTCGATGATATTG Atu3025 18008 - 20338 + | oligo alginate lyase Atu3026 20354 - 21103 + | short chain dehydrogenase TERM 22 21320 - 21338 + G 75 -8 -4.20817 | opp_overlap 21320, overlap 21292 CTGGGAGCCGAGCAA CCGGCCGG GCA TCAGCCGG TTCTTTTCCGGTCTC TERM 23 22088 - 22107 + G 85 -3.4 -5.38497 | overlap 22089 AGCGCTGGCACCGTT TCGTGCCG ATGA CGGCAGGC TTTTTTCCTTTCCGT Atu8093 21120 - 22289 + | hypothetical protein TERM 24 22715 - 22727 + G 70 -4.7 -4.56597 | opp_overlap 22710 22715 GAACATAGAACAGAG CGCGG CAC CGGCG TTTTTGGCAGCAGGC Atu3027 22325 - 23320 + | dehydrogenase Atu3028 23317 - 24114 + | hypothetical protein TERM 25 25308 - 25320 + G 74 -3.4 -4.73388 | overlap 25299 GAACGCGACGACACG GCTT ACATG AAGC TTTTTGATCCCGATT gudD 24114 - 25361 + | glucarate dehydratase TERM 26 25390 - 25400 + T 75 -6.8 -4.41548 | overlap 25350 25348 TGCCGCGACGTCACC GCAC TCA GTGC TTTTCTGGCATCTGA Atu3030 25780 - 25394 - | hypothetical protein Atu3031 25864 - 26082 + | hypothetical protein TERM 27 26412 - 26377 - g 71 -8.8 -3.78953 | ATGCCCATCAGGAAA CCAGCGGCAGCGGCAG AATT CAGACGCTGCGGGTGG TGGCGCGCCAGAAAG Atu3032 26127 - 26531 + | hypothetical protein Atu3033 26596 - 26835 + | hypothetical protein Atu3034 26854 - 27402 + | ROK family transcriptional regulator Atu3035 29794 - 27551 - | two component response regulator TERM 28 28500 - 28443 - G 73 -4.8 -4.63218 | gap 3 TCGTGCTCAACAAAA TGCAGCAGGTCACGCGGCTT-TCCCGCCT CGT AGGCGAGACAGGCCTCG-G-CAAGCCGCA ACATCCGGAACTCCT TERM 29 28695 - 28722 + g 73 -10.6 -3.66178 | gap 1, opp_overlap 28672 CGGGTGGCCGCGGCC TCCGCC-TCGCGA AAA TTGCGGCGGCGGA TTTCGAATTCAAGCA TERM 30 28898 - 28886 - G 81 -4.7 -4.90778 | GGCAGCGAAAGAAAA CCGCG AGT CCCGG GAAAGCACTTTCAGC TERM 31 30023 - 29999 - H 87 -8 -4.57837 | gap 1 ACATGCGGTGAAAAA TTGTGC-TCAG GCAA CTGATGCACAA GGAACGTTCCACCGA Atu3036 30038 - 31066 + | ABC transporter, membrane spanning protein (dipeptide) TERM 32 31162 - 31174 + G 70 -3.3 -4.62984 | overlap 31147 31151 31155 CCGGCGGCGGTCATC GGTTC GCT GATCC TTTTGTCTGTGCTGG Atu3037 31066 - 31947 + | ABC transporter, membrane spanning protein (dipeptide) Atu3038 31952 - 33598 + | ABC transporter, nucleotide binding/ATPase protein (dipeptide) TERM 33 34273 - 34289 + G 84 -9.4 -4.52589 | opp_overlap 34272 AAGCGCTGAAGGCAG CGGGCA TCACC TGCCCG TTTTATATCACCCAG Atu3039 33615 - 35171 + | hydantoinase beta subunit-like protein Atu3040 35164 - 36297 + | hypothetical protein TERM 34 36805 - 36781 - g 84 -9.9 -4.1466 | opp_overlap 36781 ATTGAAGCCCGAAAA CGTCACCGCGC CCG ACGAGGCGACG TTGGTCATGAAGATC Atu3041 36341 - 37954 + | ABC transporter, substrate binding protein (dipeptide) TERM 35 37997 - 37972 - f 100 -16.1 -4.25104 | overlap 37973 TCCGCCTCATGAAAA CCGGCCCCGCC TCAG GGCGGGACCGA TGAGACCAGAACGAC TERM 36 37996 - 37973 - f 100 -17.4 -3.14848 | overlap 37972 CCGCCTCATGAAAAC CGGCCCCGCC TCAG GGCGGGACCG ATGAGACCAGAACGA TERM 37 38495 - 38513 + G 88 -13.2 -3.64103 | opp_overlap 38480 GATGACATCCTTCGC CATCGGCA ACC TGCCGATG TTTCCGCTGTCGCTG Atu3042 38070 - 39146 + | hypothetical protein Atu3043 39143 - 40681 + | hydantoinase beta subunit-like protein TERM 38 40661 - 40672 + F 71 -7.2 -4.02535 | CGCGTGCGGGTCATC GGCG ATAT CGCC TTTCATTGATTGTAA TERM 39 41181 - 41170 - g 70 -3.6 -4.68593 | TTCACCACGCAAAAA CGCC TCGA GGCA CTGGCAGCGATGAAG TERM 40 41255 - 41238 - g 70 -3.3 -4.68645 | overlap 41239 GACGGAAAACGAAAA GCACGGA ACCG TCGGCGC GGTGGCGCTCGATGC asg 40726 - 41670 + | asparaginase Atu3045 42083 - 41736 - | hypothetical protein TERM 41 41951 - 41967 + g 71 -7.9 -4.12188 | GCTCGGCCATCCAGA CGGCAAC GAT GGTGCCG TTTTCGACGTCGTCC Atu3046 43475 - 42150 - | oxidoreductase Atu3047 44377 - 43487 - | ABC transporter, membrane spanning protein (oligopeptide) TERM 42 44268 - 44251 - G 78 -7.1 -4.67353 | CGACGCAGGCAAAAA TCATGAT CATA ATCATGA TGACGCCAAGTACAG Atu3048 45369 - 44419 - | ABC transporter, membrane spanning protein (oligopeptide) TERM 43 45431 - 45455 + r 100 -17.1 -3.57792 | opp_overlap 45422 45420 CGAATAGCCGTCACG GCACCGGCGAC CTT GACGCCGGTGC TTTCCACATAGCTCG Atu3049 47160 - 45499 - | ABC transporter, substrate binding protein (oligopeptide) TERM 44 46836 - 46852 + g 80 -10.8 -4.09685 | opp_overlap 46830 46845 46847 TCCAAGCGAGGCCAT CGGCGG AAATA CCGCCG TTTTCGACGGTCGGC TERM 45 47145 - 47159 + g 75 -2.1 -4.87893 | TATTCATAAGCGGCT TGTTC TGGTC GGACA TTTTTAGTTCCCCTT Atu3050 48628 - 47297 - | putative AgaE Atu3051 49340 - 48630 - | agropine synthesis reductase Atu3052 49822 - 49337 - | MarR family transcriptional regulator Atu3053 51757 - 50111 - | ABC transporter, nucleotide binding/ATPase protein (peptide) TERM 46 51260 - 51226 - G 74 -13 -3.16191 | gap 2 GCACATCCGGATCAA GCGCCAGCGC--CATG GCGAT CATGACGCGCTGGCGC TGCCCGCCAGACAGG TERM 47 52761 - 52781 + G 84 -5.3 -4.98522 | TCCGACTGCCGCTTG GCGAGCC CTTTGGA GGCCCGC TTTTTCTGTCGCATT TERM 48 53260 - 53247 - g 71 -9.5 -3.727 | CGCAGGAGATTCAAA CCGGC CTGT GCCGG CTCGGCTTCCGAAAC Atu3054 52166 - 53335 + | hypothetical protein TERM 49 53457 - 53472 + T 100 -10.4 -5.75342 | TCCGCACTATTGCAG CCCTCC TGAC GGAGGG TTTTTTTTGCGCGAA Atu3055 54800 - 53535 - | hypothetical protein crdS 56809 - 54845 - | beta 1,3 glucan synthase catalytic subunit TERM 50 56392 - 56357 - G 81 -14 -3.32022 | gap 1, opp_overlap 56376 56377, overlap 56359 56376 56377 GTCGTCACAGACGAA GACGCGCAGTCGA-GGA TAA TCCATCGCCTGCGCGGC GATGATGGATTTTTC TERM 51 56390 - 56359 - G 82 -15.2 -3.22777 | gap 1, opp_overlap 56376 56377, overlap 56357 56376 56377 CGTCACAGACGAAGA CGCGCAGTCGA-GGA TAA TCCATCGCCTGCGCG GCGATGATGGATTTT TERM 52 56376 - 56401 + g 70 -4.7 -4.57341 | gap 1, opp_overlap 56359 56357 56376 56377, overlap 56377 CGCAGTCGAGGATAA TCCATCGCCTGC GCG GC-GATGATGGA TTTTTCGAGAACGTT TERM 53 56926 - 56884 - R 75 -7 -4.40963 | gap 1, overlap 56867 56887 56888 56911 ATCTTTGAAAAAGAA GAAC-TGCCCTGCGGGT ATAGGAGTGA ACCCGCAGGGCTCGCCC AATCCATGCGGGTGT TERM 54 56922 - 56887 - R 77 -7.5 -4.31587 | overlap 56884 56888 56911 TTTGAAAAAGAAGAA CTGCCCTGCGGGT ATAGGAGTGA ACCCGCAGGGCTC GCCCAATCCATGCGG TERM 55 56921 - 56888 - R 74 -11 -3.17868 | overlap 56887 56884 56911 TTGAAAAAGAAGAAC TGCCCTGCGGGT ATAGGAGTGA ACCCGCAGGGCT CGCCCAATCCATGCG Atu3057 58398 - 56941 - | hypothetical protein TERM 56 57904 - 57915 + g 83 -2.2 -5.27335 | opp_overlap 57900 GCCTTGAAAAACGCC CTTG TCGA CGAG TTTTTGTTTGCGAGC TERM 57 57929 - 57939 + g 71 -8.2 -4.13945 | AGTTTTTGTTTGCGA GCCG CTT CGGC TTTTGCGATCCGCGT TERM 58 59459 - 59438 - g 70 -4.4 -4.56597 | gap 1, opp_overlap 59438, overlap 59439 TCCTGTGGGTAAAAA CCGTTCGCC ATCTG GGCGA-CGA ATATTTGATGATTGC Atu3059 58822 - 60405 + | Na+/H+ antiporter Atu3060 62652 - 60688 - | ABC transporter, nucleotide binding/ATPase protein TERM 59 61026 - 61046 + g 84 -3.1 -5.27477 | overlap 61027 61030 CGGACAATGTTTGGT CCCAGGGCG CCT CGTCCTCGA TTTTTTCCTTGAGCT TERM 60 63248 - 63284 + G 75 -2.2 -4.87665 | opp_overlap 63247 63246 AAATAAGAAAAAGCG CCGACGTCCTCG ACAGGATGGAGCG CGAGGCCATCGG TTTTTATCGCTCCAG TERM 61 63897 - 63909 + G 74 -3.3 -4.7254 | overlap 63898 GTCCGACCCTTCGTT CTCCG CCC CGGAA TTTTTGATCGACGAT Atu3061 62905 - 64674 + | GGDEF family protein Atu3062 64913 - 65941 + | LacI family transcription regulator TERM 62 66097 - 66108 + G 74 -5.8 -4.57073 | opp_overlap 66096 66097 CTGGTGCAGATCAAC CAGC AGGC GCTG TTTTTCAACCAGATG Atu3063 65974 - 66927 + | ABC transporter, nucleotide binding/ATPase protein Atu3064 66924 - 67727 + | ABC transporter, nucleotide binding/ATPase protein Atu3065 67724 - 68728 + | ABC transporter, membrane spanning protein (sugar) Atu3066 68733 - 69800 + | resiniferatoxin-binding, phosphotriesterase-related protein Atu3067 69825 - 70595 + | hypothetical protein Atu3068 71501 - 70605 - | ribokinase TERM 63 70921 - 70906 - G 76 -7.5 -4.4767 | GCACGCAGCAGAAAA GCGCC CGCCCC GGCGC CGCTCTCACCGGTCA TERM 64 72318 - 72331 + G 70 -3.7 -4.63218 | AACCCGGTCGAACTG GCGCG GGTA CGCTC TTTTGTTGCCGCAGC Atu3069 71526 - 72368 + | hypothetical protein TERM 65 73209 - 73238 + G 78 -7 -4.62783 | opp_overlap 73205 TGGCTTTACAACCCG CTGCGGTCAACG CCATTC CGCAGACCGCGG TTTTTACCGTCGATA amaB 72383 - 73624 + | allantoate amidohydrolase Atu3071 73728 - 74213 + | hypothetical protein TERM 66 74573 - 74563 - T 78 -2.4 -5.14965 | overlap 74565 AGGCTGATCAAAAAA GGCG GCC CGAC CGGTGTCCTTTCGCG TERM 67 74605 - 74640 + T 78 -6.1 -4.74103 | gap 2, overlap 74608 ATGGCCTGCTGCACG CGAGGCGCACGCGCCAG ACCA CTGCCGCGT-CACC-CG TTTTTGCATTCAGGC Atu3072 78721 - 74687 - | peptide synthetase TERM 68 75036 - 75023 - G 91 -5.2 -5.4756 | overlap 75010 AAGGCGAAGAAAAAA CGCC AGCCAG GGCG TGCCCCGCAGCGGTT TERM 69 75660 - 75690 + g 71 -8.2 -4.08216 | overlap 75662 TCCGCAATGAAGCTT TCCGGCCCGATATC GAC GAGATCGGGCACGA TTTTCGCAGCCGTCG TERM 70 75885 - 75860 - G 76 -13.3 -3.09878 | gap 1, opp_overlap 75854 75877 GCTATGGATCGAATA TCGCCCGGGCCG GAC CGGCCCGAG-GA TCAGGCGTTTGGCGG TERM 71 78485 - 78518 + g 71 -8.1 -4.12188 | gap 1, overlap 78470 GGTGGCACGCTCGGC CAGCTGCGCGTAGCTG AGC CGGGTGCG-GCGGCTG TTTTCGGGATCGTGG Atu3073 79578 - 78886 - | aspartate racemase Atu3074 80557 - 79784 - | short chain dehydrogenase TERM 72 80679 - 80666 - g 79 -9.5 -4.18094 | overlap 80655 GAAACGACGCGAAAA CGCGG CAGG CCGCG CCTGCTCGATCGGAA TERM 73 81043 - 81016 - g 76 -5.4 -4.64676 | overlap 81017 GCATTCGGAAGAAAA CGCCTCCGTCGC CCGT GCCACGGCAGCA TTGCGCGAGGGGGCG Atu3075 80645 - 81289 + | TetR family transcriptional regulator TERM 74 81272 - 81306 + T 85 -12.9 -3.61356 | overlap 81275 GCTAGCGGCCGATGG AGCGGCCTCAACAAG TGATC CTTGTTGAGGCCTCG TTTCACATGGCTGCT TERM 75 81275 - 81303 + T 93 -17.6 -2.92792 | overlap 81272 AGCGGCCGATGGAGC GGCCTCAACAAG TGATC CTTGTTGAGGCC TCGTTTCACATGGCT uraA 82710 - 81388 - | uracil transport protein ampC 84123 - 82966 - | beta-lactamase TERM 76 84586 - 84602 + G 86 -13.7 -3.53091 | CCGTCGGCTGGCTGC TGCCGCG GCT CGCGGCA TTTCAAAAGCGGCAT ampR 84258 - 85136 + | LysR family transcriptional regulator chrA 86363 - 85146 - | chromate transport protein TERM 77 85685 - 85654 - G 74 -3.7 -4.82901 | gap 1, overlap 85662 CCGGCGCGATAAAAA GCATCA-AACAGGG AGATG CCCTGCGACGATGC CCCTGCTGCAAGCAG TERM 78 85837 - 85817 - G 76 -10.4 -3.80276 | gap 1, overlap 85818 AGCGACAGAAGACAA GCC-CGGCG AATG CGCCGAGGC CAAGCGCCAGAACCT TERM 79 86485 - 86436 - R 83 -13.1 -3.25341 | gap 2, overlap 86434 86440 ATTGCAACAGGAACA TGAAGGGCCCG-TC-CCCAAGAC GACCAG GTCTCAGGCGATCAGGCCCTTCA GAGGGCGAATGAGAT Atu3080 87689 - 86466 - | hypothetical protein Atu3081 89185 - 87692 - | hypothetical protein TERM 80 87881 - 87856 - G 70 -3.9 -4.59773 | gap 1 CCTGATGGGCAAAAA GGC-TCGCGG CATCGAT CCGCGTTGCC AGCCCCTCGGAGGAA TERM 81 88929 - 88945 + g 85 -9.3 -4.66833 | opp_overlap 88930, overlap 88930 GCCTTCTCAACAGAG ACGGCGG TCA CCGCCGG TTTTTCACGTTCGGC TERM 82 88944 - 88930 - G 72 -12.8 -3.09273 | opp_overlap 88929 88930 CCTTCTCAACAGAGA CGGCGG TCA CCGCCG GTTTTTCACGTTCGG TERM 83 88930 - 88944 + g 76 -12.8 -3.39618 | opp_overlap 88930, overlap 88929 CCTTCTCAACAGAGA CGGCGG TCA CCGCCG GTTTTTCACGTTCGG TERM 84 89280 - 89318 + r 100 -19.6 -3.08679 | TTTCGTGGCAGGCTT CGGCGCCTCGCGGGAG AGCAGGC CTTCCGCGAGACGCCG TCTTGCATCCAGCGA Atu8183 89711 - 89262 - | hypothetical protein TERM 85 89411 - 89426 + g 74 -5.4 -4.52857 | gap 1 TGCGGGCGCGTTCCA GCGC-GT CGG ACAGCGC TTTTGTGTCCAGCGT Atu3083 90148 - 89708 - | hypothetical protein sigW 90687 - 90145 - | RNA polymerase sigma factor Atu3085 91582 - 90839 - | hydantoin racemase TERM 86 91019 - 90988 - G 78 -13.6 -3.24747 | CTGCGACACCATCAA CGACCGGCACGCCG AATT CGGCGCGCAGCTCG GCGGTCAGGTCTGCC TERM 87 91381 - 91358 - G 76 -12.4 -3.35597 | overlap 91356 GGTATCGTCGAAACA GGCGATGACG GCCG CGTCAACGCC AAGCGCCGGAGCCTT Atu3086 92412 - 91594 - | ABC transporter, membrane spanning protein (spermidine/putrescine) TERM 88 92111 - 92097 - G 89 -7 -5.1287 | opp_overlap 92097, overlap 92098 CCGAGAGGTAAAAAA GCGGCG TCG CGCCGA TGAATTTGCGCCTGA TERM 89 92110 - 92098 - G 73 -10.5 -3.66999 | opp_overlap 92097, overlap 92097 CGAGAGGTAAAAAAG CGGCG TCG CGCCG ATGAATTTGCGCCTG Atu3087 93327 - 92416 - | ABC transporter, membrane spanning protein (spermidine/putrescine) TERM 90 93265 - 93289 + g 100 -10 -5.47218 | opp_overlap 93252 AAGCTTCTGCGGCAG GGCGAAGCTG CGGGA CAGCTTCTCC TTTTTTTCACTGACG TERM 91 93521 - 93550 + r 86 -14.3 -2.99471 | AGGCTCTGTTACTAT CGAGATCGGCGGC CAAC GCTACCGATCTCG TCTGTCTCGGAGTAC Atu3088 94854 - 93565 - | ABC transporter, substrate binding protein (spermidine/putrescine) Atu3089 95970 - 94885 - | ABC transporter, nucleotide binding/ATPase protein (spermidine/putrescine) TERM 92 95198 - 95220 + g 70 -4.1 -4.59773 | gap 1 CCACCGCCCGCCACT TCGAGCG-TC ACGA GATCGCCCGA TTTTTCGCGGTAGCG Atu3090 97176 - 96196 - | DNA polymerase III subunit epsilon TERM 93 96671 - 96651 - G 71 -7.5 -4.18018 | overlap 96629 96630 CCTTGTCACGGAAAA TCGGCGAGA AGG CCTCGCAGA ATGGACGATCAAAGC Atu3091 97368 - 98270 + | hypothetical protein Atu3092 98792 - 98307 - | hypothetical protein Atu3093 99782 - 98889 - | transglycosylase TERM 94 99028 - 98992 - G 76 -12.1 -3.29263 | opp_overlap 99013, overlap 98993 ATACGGGCGGCATAA CGCGGCCGCGAGCCGAA GTT CCCGCCCCGCTGCCGCA CGATCAGGGCTCGTT TERM 95 99027 - 98993 - G 72 -13.4 -2.57344 | opp_overlap 99013, overlap 98992 TACGGGCGGCATAAC GCGGCCGCGAGCCGAA GTT CCCGCCCCGCTGCCGC ACGATCAGGGCTCGT mcpA 101985 - 100201 - | methyl-accepting chemotaxis protein TERM 96 102689 - 102658 - g 85 -6.5 -4.75472 | gap 1, overlap 102659 TGGATATGAAGAAAA TCGACGTCGCCGCC ATCGA GGCCGC-ACGTCGC GGTTGACGCGGACGA TERM 97 102688 - 102659 - g 70 -10 -3.4456 | gap 1, overlap 102658 GGATATGAAGAAAAT CGACGTCGCCGCC ATCGA GGCCGC-ACGTCG CGGTTGACGCGGACG Atu3095 102222 - 102695 + | hypothetical protein TERM 98 102859 - 102873 + F 72 -11.4 -3.01712 | opp_overlap 102855 102852 102850 102859 102870 102871 ACAAAATGTAAGCGA GCCGTC AAA GACGGC TGTTAGCAGAGCCCG ugpB 102956 - 104299 + | ABC transporter, substrate binding protein (sn-glycerol 3-phosphate) TERM 99 104351 - 104323 - f 100 -16 -3.29144 | TCATTGCCGTCATAA GGCCTGTCCGGA CATCC TCCGGGCAGGCC CGCCTCAATCTCGAA ugpA 104382 - 105272 + | sn-glycerol-3-phosphate ABC transporter membrane protein ugpE 105280 - 106164 + | sn-glycerol-3-phosphate ABC transporter membrane protein TERM 100 106610 - 106585 - g 85 -15.4 -3.17723 | CTATCTGGAACGCAA GCCGGCCGCC CTTTCC GGCGGCCAGC GCCAGCGCGTGGCCA TERM 101 107010 - 106992 - g 74 -11.6 -3.53343 | AACTCTTCCCGGAAA CCGCGCTG GAA CTGCGCGG CCGCAATGTGACGGT ugpC 106196 - 107317 + | glycerol-3-phosphate transporter ATP-binding subunit Atu3100 108217 - 107390 - | ABC transporter, membrane spanning protein (sugar) TERM 102 107509 - 107525 + g 73 -10.1 -3.67296 | opp_overlap 107509 107508, overlap 107491 TCAGCCGCGCATAAG CGACGCC GAA GGTGTCG TTTACCTGGGTGATG Atu3101 109092 - 108214 - | ABC transporter, membrane spanning protein (sugar) TERM 103 109032 - 109019 - G 90 -4.5 -5.42514 | GGATAAAGGAAAAAA GTGGC GAAG ACCAC GATGAACGGCGTCAC TERM 104 109130 - 109160 + r 100 -15.4 -3.97209 | overlap 109131 ATTACGCATTGCAGG GCAACCCTCCGGCC AGA GACCGGAGGGTTGG TTTCCTGTTACTTCA TERM 105 109131 - 109159 + r 100 -18.9 -2.97602 | overlap 109130 TTACGCATTGCAGGG CAACCCTCCGGCC AGA GACCGGAGGGTTG GTTTCCTGTTACTTC Atu3102 110442 - 109168 - | ABC transporter, substrate binding protein (sugar) TERM 106 109409 - 109434 + g 76 -6.1 -4.65895 | gap 1, opp_overlap 109409, overlap 109410 TAGGCCGGGATATGA C-CGGCATCGGC CCA GCTGATGGCGTG TTTTTCCATCCAGCC TERM 107 109410 - 109432 + g 78 -9.8 -3.94812 | opp_overlap 109409, overlap 109409 AGGCCGGGATATGAC CGGCATCGGC CCA GCTGATGGCG TGTTTTTCCATCCAG TERM 108 109882 - 109897 + g 78 -4.6 -4.86731 | overlap 109883 GGACTGATAGGTGAC CGGCGT CTGG ACGCCC TTTTCTTTCGCCCAG Atu3103 111588 - 110515 - | ABC transporter, nucleotide binding/ATPase protein (sugar) TERM 109 111265 - 111307 + g 100 -19.9 -3.28924 | opp_overlap 111306, overlap 111267 111268 CACCCTTTCATTCAC CTCGGCTTTCGGCCTGCGG GCAAG CCGCAGGCTGAAAGCCATG TTCTCGAACACGCTG TERM 110 111267 - 111305 + g 100 -21.1 -3.21276 | overlap 111265 111268 CCCTTTCATTCACCT CGGCTTTCGGCCTGCGG GCAAG CCGCAGGCTGAAAGCCA TGTTCTCGAACACGC TERM 111 111268 - 111304 + g 100 -24.6 -2.52623 | overlap 111267 111265 CCTTTCATTCACCTC GGCTTTCGGCCTGCGG GCAAG CCGCAGGCTGAAAGCC ATGTTCTCGAACACG arfA 113107 - 111596 - | alpha-L-arabinofuranosidase celI 114157 - 113228 - | hypothetical protein TERM 112 114302 - 114341 + r 100 -14.2 -4.91109 | opp_overlap 114304, overlap 114303 114304 CGCGATCAATGAAAA AAGCAACGCCACACGGCT GCGA GGCCGTGTGGCGGTGCCC TTTTTGTCGTCAACC TERM 113 114303 - 114340 + r 100 -17.7 -3.54183 | opp_overlap 114304, overlap 114302 114304 GCGATCAATGAAAAA AGCAACGCCACACGGCT GCGA GGCCGTGTGGCGGTGCC CTTTTTGTCGTCAAC TERM 114 114304 - 114339 + r 100 -21.2 -2.72028 | opp_overlap 114304, overlap 114303 114302 CGATCAATGAAAAAA GCAACGCCACACGGCT GCGA GGCCGTGTGGCGGTGC CCTTTTTGTCGTCAA TERM 115 114339 - 114304 - R 100 -20.5 -5.30155 | opp_overlap 114304 114303 114302 CGATCAATGAAAAAA GCAACGCCACACGGC TGCGAG GCCGTGTGGCGGTGC CCTTTTTGTCGTCAA Atu3106 115637 - 114351 - | ABC transporter, substrate binding protein (sugar) TERM 116 115057 - 115077 + g 74 -3.1 -4.85782 | overlap 115060 115061 TAATGATACCGCGCG CCATAGGGC ACC GCCCAGTAG TTTCTTTTTGCCGGG Atu3107 115756 - 116817 + | LacI family transcription regulator TERM 117 117841 - 117853 + G 73 -9.1 -3.87994 | CGGTTCGCCCTATTG GGCCT TCA AGGCC TTTCTGCCGCTGGCT TERM 118 118023 - 118009 - g 71 -7 -4.2558 | overlap 118010 GAGCGGCCAGGAAAA CCTCGC CAT GCGCGG CGGGCCCGAGAAATA Atu3108 116810 - 118693 + | hypothetical protein Atu3109 118690 - 119706 + | 2-hydroxyacid dehydrogenase Atu3110 119703 - 120491 + | hypothetical protein TERM 119 120522 - 120542 + T 76 -12.6 -2.80994 | TCACACGCGACGTCA TCCTCGGC CCTGT GCCGAGGA TCTAATCACGTTGAA Atu3111 121739 - 120666 - | ABC transporter, nucleotide binding/ATPase protein (sugar) Atu3112 122706 - 121831 - | ABC transporter, membrane spanning protein (sugar) TERM 120 122081 - 122067 - G 85 -2.8 -5.31059 | overlap 122069 AGATGAAGGAAAAAA TGGC GGCCGTG GCCA GTACCGGCATCGACA Atu3113 123586 - 122699 - | ABC transporter, membrane spanning protein (sugar) Atu3114 124948 - 123659 - | ABC transporter, substrate binding protein (sugar) TERM 121 124150 - 124140 - G 75 -8.2 -4.14392 | TTGGAATGGGCAAAA GCGG TAG CCGC CTTGCCAGTCGTCAA TERM 122 124322 - 124334 + g 76 -9.1 -4.09864 | AAGCGACTTGCCGTT CTGGC GCA GCCAG TTTTCGAAGCTCGGT TERM 123 124452 - 124471 + g 74 -6.3 -4.56597 | overlap 124453 124455 CAGGTCTGCCCGGTC GCCGGCG GTGTGG CGCCGGA TTTTTCCCACGCCGC Atu3115 125066 - 125764 + | TetR family transcriptional regulator TERM 124 125746 - 125779 + F 74 -10.2 -3.60151 | overlap 125741 CAGCACCCTGCTTGC TGCGGTGCGGCCGG TCTGAT CCGGCTGAACCGAA TTCTCCTTTAACAAC TERM 125 125800 - 125831 + F 87 -8.1 -4.66537 | gap 2, overlap 125818 CTTTAACAACAGTGA CGACGTGCCATTCGC AACC GCGAA-G-CGCGTCG TTTTCTGTTGCGGCG TERM 126 125994 - 125973 - f 76 -12.3 -3.05816 | CCATGTTTGACGGAA GCGGCCTTC GGGA AAAGGCCGC CTTGGGAGGAAATTC Atu3116 126031 - 127152 + | oxidoreductase TERM 127 127277 - 127244 - g 74 -5.9 -4.56597 | gap 1, opp_overlap 127248 127252 127275 GTCGCCGTTGAAAAA CG-AAGTGCCGCGGAT TTC AACCGCGTCGCTTTCG CCGCCGCCCATGTGG Atu3117 127163 - 128326 + | hypothetical protein TERM 128 128526 - 128551 + G 95 -11.7 -4.57073 | opp_overlap 128518 AGCAGAATGGCCTGC GCCTCAGCGGC CATT GCCGCGGCGGC TTTTTCCCCGCCATC Atu3118 128351 - 129172 + | hypothetical protein TERM 129 129239 - 129269 + G 84 -11 -4.08767 | overlap 129240 CTGGTTGGCACCGGC AATCGCGGCACCAC CAT GTGGGGCCGCGAAC TTTTGGCCGGCTGGA TERM 130 129240 - 129268 + G 80 -14.5 -3.05046 | overlap 129239 TGGTTGGCACCGGCA ATCGCGGCACCAC CAT GTGGGGCCGCGAA CTTTTGGCCGGCTGG Atu3119 129191 - 130426 + | hypothetical protein Atu3120 130945 - 130448 - | hypothetical protein cspA 131190 - 131399 + | cold shock protein TERM 131 131463 - 131482 + F 100 -9.2 -5.26119 | CAAATGACTGTGAGA GGTCGGGT AAAA GCCCGGCC TTTTGTTTTTGGGCC Atu3122 131511 - 131801 + | cold shock protein rpsU 131830 - 132066 + | 30S ribosomal protein S21 Atu3124 132103 - 132318 + | hypothetical protein TERM 132 132340 - 132318 - f 76 -10.5 -3.67877 | overlap 132316 ATCCGGCAAGAAATA GCGGGCGGT TTTTT ACCGCCCCC CCGGTTAACTCAGGA TERM 133 132704 - 132727 + F 100 -10.2 -5.64304 | opp_overlap 132704 GAGCGATATGAGGAA GGTCGGTGCA ATAT TGCCCCGGCC TTTTTTGTTGTCTTC Atu3126 133057 - 133344 + | hypothetical protein TERM 134 133723 - 133752 + T 85 -12.8 -3.57309 | overlap 133714 133745 ATTTGAGATCGACAG TCCGCCCGCTGG ACTAGA CCGGCTGGCGGA TTTCCGCGCGTTTTC rspF 134833 - 133736 - | acetyltransferase yteR 136084 - 134987 - | di-trans,poly-cis-decaprenylcistransferase picA 137646 - 136093 - | polygalacturonase-like protein TERM 135 137752 - 137723 - R 91 -12.1 -4.07568 | gap 1, opp_overlap 137723 137724, overlap 137724 CCGGCGGCCGGAAAA TGGCCCCGCC-GCA AGT TGCCGGCGGGACCG TTTGTTTCAGTCGAA TERM 136 137723 - 137752 + r 95 -12.1 -4.46112 | gap 1, opp_overlap 137723 137724, overlap 137724 CCGGCGGCCGGAAAA TGGCCCCGCC-GCA AGT TGCCGGCGGGACCG TTTGTTTCAGTCGAA TERM 137 137724 - 137751 + r 87 -13.4 -3.27185 | gap 1, opp_overlap 137723 137724, overlap 137723 CGGCGGCCGGAAAAT GGCCCCGCC-GCA AGT TGCCGGCGGGACC GTTTGTTTCAGTCGA TERM 138 137751 - 137724 - R 93 -15.6 -3.04398 | gap 1, opp_overlap 137724 137723, overlap 137723 CGGCGGCCGGAAAAT GGCCCCGCC-GCA AGT TGCCGGCGGGACC GTTTGTTTCAGTCGA Atu3130 139027 - 137759 - | ABC transporter, substrate binding protein (sugar) Atu3131 140171 - 139071 - | ABC transporter, nucleotide binding/ATPase protein (sugar) Atu3132 141058 - 140174 - | ABC transporter, membrane spanning protein (sugar) Atu3133 141944 - 141063 - | ABC transporter, membrane spanning protein (sugar) TERM 139 142573 - 142615 + G 75 -7.8 -4.16842 | gap 1, overlap 142578 CCCGCCCTCCTCCGT GACACTCGGCCAGCACCAT CTTTTC ATGGTGCTG-CTGATTGCC TTTATTGACGATGCC Atu3134 142157 - 143083 + | AraC family transcriptional regulator TERM 140 143096 - 143065 - T 72 -12.3 -2.71712 | opp_overlap 143066 143071, overlap 143071 GCTTGCCGCTGAAAT GGAAAAGGCCCCG GCATAG CGGGGCCTTCTCG TTTGCAAGCTCGGGA TERM 141 143066 - 143095 + T 79 -13.6 -2.73124 | opp_overlap 143065 143071, overlap 143071 CTTGCCGCTGAAATG GAAAAGGCCCCG GCATAG CGGGGCCTTCTC GTTTGCAAGCTCGGG TERM 142 143090 - 143071 - T 93 -12.1 -4.35524 | opp_overlap 143066 143071, overlap 143065 CGCTGAAATGGAAAA GGCCCCG GCATAG CGGGGCC TTCTCGTTTGCAAGC TERM 143 143071 - 143090 + T 81 -12.1 -3.60151 | opp_overlap 143071 143065, overlap 143066 CGCTGAAATGGAAAA GGCCCCG GCATAG CGGGGCC TTCTCGTTTGCAAGC Atu3135 144393 - 143113 - | ABC transporter, membrane spanning protein TERM 144 144050 - 144038 - G 76 -10.5 -3.78775 | TGCGGGATCATCAAA CCGCC AAC GGCGG AAGCATCGGCGACGG Atu3136 144915 - 144394 - | ABC transporter, membrane spanning protein TERM 145 144899 - 144887 - G 71 -6.2 -4.37092 | overlap 144889 AGCGCGCCGAGAAAA GGGC GAATT GCCC GCATGAAATTTCGCA TERM 146 144979 - 144948 - R 100 -23.2 -4.68103 | opp_overlap 144953, overlap 144953 TCAACGGCAACAAAA GAAAACCGGCCCTG TTTC CAGGGCCGGTTTTC CGCGCGTTACTTGAC TERM 147 144953 - 144974 + r 100 -17.3 -4.09739 | opp_overlap 144948 144953 GGCAACAAAAGAAAA CCGGCCCTG TTTC CAGGGCCGG TTTTCCGCGCGTTAC TERM 148 144974 - 144953 - R 100 -17.3 -5.27476 | opp_overlap 144953, overlap 144948 GGCAACAAAAGAAAA CCGGCCCTG TTTC CAGGGCCGG TTTTCCGCGCGTTAC Atu3137 145963 - 144986 - | C4-dicarboxylate-binding protein TERM 149 145100 - 145120 + g 100 -8.9 -5.06414 | overlap 145113 GTTGACCTTGATGAC GTTGGCGCC ACC GGCGCGGAC TTTTTCTTCCGACGC TERM 150 145454 - 145486 + g 70 -3.3 -4.67011 | opp_overlap 145443, overlap 145443 145456 CAGATCCGACTGCTG CACGCGGATTTTAAG ACC CTTCAGGTCCGCCAG TTTTTCAATCGGCTT Atu3138 146985 - 146107 - | hypothetical protein TERM 151 146634 - 146662 + g 71 -6.6 -4.26622 | gap 1, opp_overlap 146633, overlap 146633 GCAAATCCATGATAC GCGCGCCGACCGT ACCG GCGG-CGGTGAGC TTTTCCATGTCCTTT Atu3139 148118 - 146982 - | hypothetical protein TERM 152 147260 - 147274 + g 70 -10 -3.46008 | overlap 147259 GCACGCCGTGAAGTG TCGCCA GCG TGGCGA TCTTCTGTATTTCGG TERM 153 148076 - 148025 - G 72 -10.9 -3.41051 | opp_overlap 148044, overlap 148027 148065 CGATCTCCACCAGAA CATGGGCCCGCCGGTCGAA-GCGCA TGGA TGCGCTTTCAAACGGCGTGTCCA-G CCGGTGTTCGAGCAG TERM 154 148075 - 148027 - G 86 -14.6 -3.27653 | gap 1, opp_overlap 148044, overlap 148025 148065 ATCTCCACCAGAACA TGGGCCCGCCGGTCGAA-GCGCA TGGA TGCGCTTTCAAACGGCGTGTCCA GCCGGTGTTCGAGCA Atu3140 149055 - 148144 - | 5-dehydro-4-deoxyglucarate dehydratase TERM 155 149035 - 149016 - G 78 -4.2 -4.78848 | gap 1, opp_overlap 149016 149019, overlap 149019 CCGGGAAAGACAAAA GACCGGAGC CGA GCGCCG-TC TTGATTTGTTCAGGG TERM 156 149180 - 149159 - R 76 -9.4 -3.93236 | overlap 149172 GATGAATTTTAGAAA CTGGCGCA AATCAG CGCGCCAG CCAGCCGCCATCGAC kduD 149912 - 149169 - | 2-deoxy-D-gluconate 3-dehydrogenase TERM 157 149260 - 149246 - G 71 -5.6 -4.38171 | overlap 149247 149248 CAGATGACAGGAAAA CCGCCG CCC CGGCAA TGTCTTCCGAATGCC kduI 150733 - 149909 - | 5-keto-4-deoxyuronate isomerase TERM 158 150456 - 150474 + g 80 -10.2 -4.06505 | GTGTAGGTCTCGTCG CCGGCGCT GAC GGTGCCGG TTTCTCCTATATTGA TERM 159 150757 - 150785 + H 74 -3.1 -4.8667 | overlap 150756 150767 TCCTTCATGATTGTT GCGCATGGCACAT AAT ATATGTTATCCGC TTTTTGTACGATCTG TERM 160 151225 - 151268 + G 82 -13 -3.56643 | gap 1, opp_overlap 151232, overlap 151219 CGGCTATTATCCGCA GACCGAACGGCTCGGTCCGGA TGT TCCGGCGCG-GCCGGACGGTC TTTACGGCGTCTCCA Atu3143 150872 - 151669 + | hypothetical protein Atu3144 151759 - 152496 + | GntR family transcriptional regulator kdgF 152547 - 152864 + | pectin degradation protein Atu3146 154119 - 152887 - | proline dipeptidase TERM 161 153109 - 153067 - G 89 -12 -4.19746 | gap 1 GTCATGGGAAAAGAA CGGCCACTCC-TCGATGCC CACCCC GCCGCCGACGGAGTGGCCG AAATGGCCGCGATAA TERM 162 153456 - 153425 - G 73 -5.1 -4.65895 | overlap 153426 CCGCTCAGCGAAAAA CCTGACGTCGC-GGC ATGC GCCTGCG-CGCCAGC CTTCCAGGCGGCAGA TERM 163 154226 - 154205 - R 74 -8.1 -4.04806 | gap 1 CGGGAGAGGAAAGAA GGTGGAAGAT GAC ATCT-CCACC ACAACGGTCGTCATC TERM 164 154319 - 154346 + r 100 -15.6 -3.51032 | opp_overlap 154319 CTTGTCCTATCCAAA TGAGGCGGCGGA TAAA TCCGCGGCCTCA TTGTCATTCACGCCT TERM 165 154346 - 154319 - R 100 -15.6 -3.64703 | opp_overlap 154319 CTTGTCCTATCCAAA TGAGGCGGCGGA TAAA TCCGCGGCCTCA TTGTCATTCACGCCT Atu3147 156357 - 154354 - | oxidoreductase TERM 166 154761 - 154789 + g 71 -9.5 -3.79906 | opp_overlap 154767 CGAGCGAGAAGTTGT TGGAAAGCGCGCC CGG GGCCTGCTTGCCA TTCTTCTGCGCATAG TERM 167 155494 - 155478 - G 71 -5.7 -4.3255 | CCTCGAAGGAATAAA GCCAGCG ATC CTCCGGC AATTCGATGGTGTCG TERM 168 155991 - 156010 + g 73 -4.8 -4.63527 | opp_overlap 155986, overlap 155992 GGTACATATAGGCTT CGCCGGCG AAGA CGCCCGCC TTTTTCGCCTCGTGG Atu3148 157478 - 156393 - | ABC transporter, nucleotide binding/ATPase protein (sugar) TERM 169 156805 - 156784 - G 74 -5.8 -4.4715 | GGCGAACCGACAAAA CCGGCAAC GAAACG GTTGGCGG GATCGTCATAGAGAT Atu3149 158324 - 157488 - | ABC transporter, membrane spanning protein (sugar) Atu3150 159181 - 158321 - | ABC transporter, membrane spanning protein (sugar) Atu3151 160710 - 159439 - | ABC transporter, substrate binding protein (sugar) TERM 170 159957 - 159977 + g 80 -3.1 -5.14563 | overlap 159951 159959 159961 TCTGGCTTGCGGCCT TGCCGGCCG TAT TGGCCTGGA TTTTTTCATCCCAGA Atu3152 160803 - 161693 + | AraC family transcriptional regulator Atu3153 162740 - 161886 - | AraC family transcriptional regulator TERM 171 161939 - 161917 - G 86 -12.6 -3.89614 | TCCAAGTCGGAGAAA GCAGCGCTGC GCT GCCGCGCCGC CTGCCGATAGGCCCT fsr 162866 - 164062 + | fosmidomycin resistance protein TERM 172 164070 - 164080 + F 70 -6.8 -4.07568 | ACCGCTAAAAGCTTC GCGT TCA ACGC TTTTCAACACGGCGG TERM 173 164087 - 164125 + F 100 -18.8 -2.52464 | opp_overlap 164090 GTTCAACGCTTTTCA ACACGGCGGTCACCTGTG ATA CTCAGGCGACCGCCGTGA TCCGTTGAGCAAAGC TERM 174 164122 - 164090 - f 100 -21.3 -3.02461 | opp_overlap 164087 CAACGCTTTTCAACA CGGCGGTCACCTGTG ATA CTCAGGCGACCGCCG TGATCCGTTGAGCAA TERM 175 165037 - 165007 - g 100 -17.7 -4.14243 | opp_overlap 165010, overlap 165010 GAGTGGATGCGAAAA CAACGCGACGAGT GGCAA ACCCGTCGCGTTG TCTGAGAGTTCGGGC TERM 176 165034 - 165010 - g 100 -13.6 -4.19746 | opp_overlap 165010, overlap 165007 TGGATGCGAAAACAA CGCGACGAGT GGCAA ACCCGTCGCG TTGTCTGAGAGTTCG TERM 177 165010 - 165034 + G 74 -11.4 -3.50447 | opp_overlap 165010 165007 TGGATGCGAAAACAA CGCGACGAGT GGCAA ACCCGTCGCG TTGTCTGAGAGTTCG Atu3155 164146 - 165042 + | LysR family transcriptional regulator Atu3156 166347 - 165067 - | ABC transporter, membrane spanning protein Atu3157 166902 - 166351 - | ABC transporter, membrane spanning protein Atu3158 168038 - 167043 - | ABC transporter, substrate binding protein mmsB 169024 - 168140 - | 3-hydroxyisobutyrate dehydrogenase TERM 178 168905 - 168928 + g 74 -5.8 -4.56775 | overlap 168909 CACCGCCGCATCGAT GGTGGTCGCC GCCT GGCGCACGCC TTTTTCCGCCAGGAT TERM 179 168909 - 168949 + g 70 -3.2 -4.64766 | gap 1, overlap 168905 168934 GCCGCATCGATGGTG GTCGCCG-CCTGGCGCA CGCCTTTT TCCGCCAGGATAGCGGC TTTTTCAGCTCTGCG TERM 180 169087 - 169113 + r 76 -9.4 -3.97307 | opp_overlap 169087 169083 169084 CCATCTTCAAAGCCA CTGCCGGTTC AGAAAAC GCACCGGCAG TTCTTCTTCGATGAG Atu3160 169380 - 169078 - | hypothetical protein Atu3161 170867 - 169398 - | hypothetical protein TERM 181 170425 - 170450 + g 72 -12.6 -3.10641 | gap 1 CCGAGCGCATGGCGC GCG-CCGGCCA GCGGA TGGCCGGTCGC TTCGATAATGCATTC Atu3162 172032 - 171019 - | LacI family transcription regulator Atu3163 173157 - 172147 - | zinc-binding dehydrogenase Atu3164 173944 - 173174 - | sorbitol dehydrogenase TERM 182 173306 - 173318 + g 81 -6.2 -4.82901 | GATCGGCACGGATTT GGCC ACCGC GGCC TTTTTCTCACCCGGC TERM 183 173782 - 173814 + g 73 -14.2 -2.70932 | CATCCAGCTTCACGG CCTTGGCTGCGG GACCGATGG CCGCAGCCGAGG TAGTTGCGCGGGCGA TERM 184 174190 - 174151 - R 75 -12.9 -2.52464 | opp_overlap 174189, overlap 174173 GGGTGCGTGAACCCA GCTATGCCGCCCG-CCACC AGAA GGCGAACGGGCGGCAC-GC CGGGAGGACGCGGCT Atu3165 175457 - 174204 - | ABC transporter, substrate binding protein (sorbitol/mannitol) scrK 175837 - 176826 + | fructokinase TERM 185 176871 - 176843 - g 76 -8.7 -4.09685 | opp_overlap 176856, overlap 176844 CGCCATTTTGGAAAA TCTCGCCGCCGCG CGC CGCGCCGGCAAAC CTGCGGGCATCACTT TERM 186 176870 - 176844 - g 72 -12.2 -3.05597 | opp_overlap 176856, overlap 176843 GCCATTTTGGAAAAT CTCGCCGCCGCG CGC CGCGCCGGCAAA CCTGCGGGCATCACT agaZ 176823 - 178100 + | tagatose 6-phosphate kinase TERM 187 178143 - 178113 - f 100 -16.8 -3.51825 | TGACGGCAATCATAA TCCGGATGCCCCTG CGG CAGGGGCCGCCGGA GCGAAATGGGGGAAG Atu3168 178224 - 179096 + | ABC transporter, membrane spanning protein (sorbitol/mannitol) Atu3169 179109 - 179933 + | ABC transporter, membrane spanning protein (sorbitol/mannitol) TERM 188 180762 - 180748 - g 74 -7 -4.41348 | overlap 180750 CGCTGTCGAAAGAAA CCGGCC TGT GGCAGG GCAAGGTGACGGTTG Atu3170 179946 - 180944 + | ABC transporter, nucleotide binding/ATPase protein (sorbitol/mannitol) Atu3171 182031 - 180955 - | ABC transporter, nucleotide binding/ATPase protein (sugar) Atu3172 182866 - 182036 - | ABC transporter, membrane spanning protein (sugar) TERM 189 182290 - 182268 - G 75 -7.6 -4.19735 | GCGGTGAAAACGAAA CCGAGCGTCG CGG CAATGCCCGG CAGCGTCAGCGGCAG Atu3173 183754 - 182870 - | ABC transporter, membrane spanning protein (sugar) TERM 190 183584 - 183563 - G 74 -6.5 -4.3739 | CAGCGCCCGATAAAA GGCAGCGTC CTGC GACAGTGCC TCCAGATGTTTCAGG TERM 191 183952 - 183924 - R 100 -17.4 -3.62597 | opp_overlap 183951 GGCAGCCCGGAAGAA CGGCCACGCGGG TTACC CCCGCGCAGCCG GCCCCAAGTCGTTTA Atu3174 185224 - 183965 - | ABC transporter, substrate binding protein (sugar) TERM 192 184502 - 184532 + g 74 -3.1 -4.84359 | overlap 184504 GATCTCGTTAAAGCC CCAGTTGACGCTG TCCTT CGGCGCCAACCCG TTTTTGTAGAGATCG TERM 193 185290 - 185259 - R 75 -5.9 -4.62069 | gap 2, opp_overlap 185266 185286 TCGTCAGTTTAAAAA CACG-TCA-GACGGC TGAG GCCGCCTTGATCGCG GGTTCGAGATCGTTC mdeA 186435 - 185263 - | hypothetical protein TERM 194 186457 - 186475 + r 71 -6 -4.34811 | ATGTCCTTGATATCC TCCTCG ACGACAG CGAGGA TTTTCAGTGTTTCTT Atu3176 187148 - 186432 - | GntR family transcriptional regulator rnhA 187838 - 187365 - | ribonuclease H TERM 195 187983 - 187958 - R 74 -11.1 -3.20028 | overlap 187956 187955 GTCACCACAAAAGCA GAGAGGGCAGC GCAC GCCACCCTCCC CTAATTCACGCCGAA Atu3178 189022 - 188009 - | ABC transporter, substrate binding protein Atu3179 189917 - 189051 - | ABC transporter, membrane spanning protein TERM 196 189112 - 189085 - G 81 -14.2 -3.281 | gap 1, overlap 189083 CCGGAACCGAGAAGA TCGCCGAGCACGC CGC GCGTGC-CGACGA GAATAGAGAGCGCGT Atu3180 190743 - 189910 - | ABC transporter, nucleotide binding/ATPase protein Atu3181 191044 - 192246 + | hypothetical protein TERM 197 192251 - 192284 + T 79 -7.3 -4.46656 | gap 1, opp_overlap 192237 192235, overlap 192250 AGGCGGCCTGATTGC CCTC-GCCGCCCGCAT TTC ATACGAGCGGCAGCGG TTTTAGTCTTCTCCC Atu3182 192762 - 192325 - | hypothetical protein Atu3183 193129 - 192860 - | hypothetical protein Atu3184 194169 - 193126 - | hypothetical protein TERM 198 194414 - 194401 - H 85 -4.5 -5.23316 | GAGCACACGAAAAAA TCGAG ACGC CCCGA AAATGGAATAATAAA ugpB 194587 - 195906 + | ABC transporter, substrate binding protein (glycerol-3-phosphate) TERM 199 195920 - 195951 + F 100 -15.1 -4.24948 | overlap 195921 AAACGATCCCTGCCC CCCGCCCGCATCG CTCACC CGGTGCGGGCGGC TTTTCCATCTCATCA TERM 200 195921 - 195950 + F 100 -18.6 -3.14487 | overlap 195920 AACGATCCCTGCCCC CCGCCCGCATCG CTCACC CGGTGCGGGCGG CTTTTCCATCTCATC ugpA 195977 - 196858 + | ABC transporter, membrane spanning protein (glycerol-3-phosphate) TERM 201 197351 - 197362 + G 72 -2.2 -4.73388 | GCAACGGCGACTTTC CTGT TCCG GCAG TTTTTCCTCACCATT ugpE 196868 - 197716 + | ABC transporter, membrane spanning protein (glycerol-3-phosphate) ugpC 197716 - 198777 + | glycerol-3-phosphate transporter ATP-binding subunit Atu3189 199581 - 198838 - | hypothetical protein TERM 202 199531 - 199543 + g 84 -3.3 -5.24531 | overlap 199532 GTCTTCCGAATACAC GCCGT AAT ACGGA TTTTTTCTGCCCCAT TERM 203 199848 - 199799 - R 72 -12.3 -2.56177 | opp_overlap 199801, overlap 199798 AGATGTGACATCAAT CTCGATTTGAACCCCACTCCAGT TGCG ACCGAAATGGAGTTCAAATCGTT TTGAAGCACTTGCGC TERM 204 199801 - 199846 + r 86 -10.5 -4.09739 | opp_overlap 199799 199798 ATGTGACATCAATCT CGATTTGAACCCCACTCCAGT TGCG ACCGAAATGGAGTTCAAATCG TTTTGAAGCACTTGC Atu3190 200346 - 199903 - | hypothetical protein Atu3191 201242 - 200556 - | outer membrane protein TERM 205 201505 - 201487 - R 100 -13.8 -4.67038 | opp_overlap 201487 CCTTGAAAAGGAAAA GAGCGCCG GTT CGGCGCCC TTCCTTACCTTCAGG TERM 206 201487 - 201505 + r 75 -11.6 -3.4052 | opp_overlap 201487 CCTTGAAAAGGAAAA GAGCGCCG GTT CGGCGCCC TTCCTTACCTTCAGG Atu3192 202811 - 201516 - | MFS permease TERM 207 201667 - 201649 - G 75 -8 -4.15044 | overlap 201661 TCGCTCTTGAAGAAA CCGGCGCC GAA AGCGGCGG TGGCCGCTCCCAGCT TERM 208 202099 - 202088 - G 76 -7.2 -4.49939 | overlap 202079 ACAGAACCCAGAAAA CCGG GTTG CCGG ACACGCTTTTCAGCG Atu3193 203282 - 202881 - | MarR family transcriptional regulator TERM 209 203410 - 203378 - R 100 -9.8 -5.19328 | opp_overlap 203385, overlap 203385 ACCGTATAATAAAAA CAATAAACCCCGGC TTTGG GCCGGGGTTCGATG TGAGCAGCGAGTATC TERM 210 203385 - 203403 + r 84 -13.8 -3.12351 | opp_overlap 203385 203378 AATAAAAACAATAAA CCCCGGCT TTG GGCCGGGG TTCGATGTGAGCAGC TERM 211 203403 - 203385 - R 100 -13.1 -4.8245 | opp_overlap 203385, overlap 203378 AATAAAAACAATAAA CCCCGGC TTTGG GCCGGGG TTCGATGTGAGCAGC Atu3194 203998 - 203429 - | acetyltransferase TERM 212 203599 - 203570 - G 70 -4.8 -4.56597 | overlap 203572 203588 CTTGTCGGCGAAAAA GCCGAAGCGCTC GTAATA GGGCGCGTCGCC GACCAGGAGGATGGC TERM 213 203907 - 203930 + g 82 -8.9 -4.30576 | gap 1, overlap 203910 CGGTCGAGAAGGTTC TCACGGGCGA CGACA TCGCCCG-GA TTTTCCTGATCGACA TERM 214 204010 - 203989 - G 75 -7.9 -4.28774 | GTACCGAATTCAAAA GAGCGGCCA TCCT TGGCCTCCC GTCACACAACCGCCC TERM 215 204154 - 204191 + r 95 -10.5 -4.62069 | gap 1, overlap 204155 CGGAACGGAAGCTTG GTCGAGACGCCGCCCTGT TCA GC-GGGCGGCGTTCGGAC TTTTTGACCTGCGCA speF 205382 - 204249 - | ornithine decarboxylase ptxR 205919 - 206812 + | LysR family transcriptional regulator TERM 216 206872 - 206841 - T 100 -17.4 -4.15044 | opp_overlap 206847, overlap 206847 TCGGGCCCCAATAAA CAAAAACGCCCGCC TTTT GGCGGGCGTTTTCA TGTGCGGGATTCTCA TERM 217 206866 - 206847 - T 100 -16.4 -5.47159 | opp_overlap 206847, overlap 206841 CCCAATAAACAAAAA CGCCCGCC TTTT GGCGGGCG TTTTCATGTGCGGGA TERM 218 206847 - 206866 + T 100 -16.4 -4.34402 | opp_overlap 206847 206841 CCCAATAAACAAAAA CGCCCGCC TTTT GGCGGGCG TTTTCATGTGCGGGA Atu3198 207838 - 206885 - | ABC transporter, substrate binding protein (ribose) TERM 219 207104 - 207130 + g 79 -9.5 -4.21462 | overlap 207127 CTTGGAACCGGCACC CGCAACGATAT ACTTG ATATCGGTGCG TTTTGCCTGCTGGAT TERM 220 207370 - 207384 + g 81 -5.6 -4.77983 | opp_overlap 207364 GAATAACCACCACTT CCGCGT CAG GCGTGG TTTTCTTGATGTATT Atu3199 208912 - 207911 - | ABC transporter, membrane spanning protein (ribose) Atu3200 210488 - 208965 - | ABC transporter, nucleotide binding/ATPase protein (ribose) acrR 211305 - 210682 - | TetR family transcriptional regulator TERM 221 211352 - 211327 - R 76 -12.5 -2.70932 | opp_overlap 211326 211328 GTCTCCTTCCAATCA CGGCACGGCGC TTTC GCACCGTGCCT CTTTGCGATGCCGGG TERM 222 211328 - 211351 + r 88 -13.8 -3.38046 | opp_overlap 211327, overlap 211326 TCTCCTTCCAATCAC GGCACGGCGC TTTC GCACCGTGCC TCTTTGCGATGCCGG Atu3202 214569 - 211435 - | RND multidrug efflux transporter Atu3203 215796 - 214582 - | RND multidrug efflux membrane permease Atu3204 217715 - 216138 - | GGDEF family protein TERM 223 216618 - 216590 - G 100 -18.1 -3.90318 | TGACGATGGCAGAAA CCGGCCTGAGCGC GCT GCGCTCCAGCCGG TTCAGCTCGTCCGAA TERM 224 216869 - 216885 + g 79 -8.7 -4.2349 | TCCAAAGCTCGATCA GCTGTTC CCG GAACGGC TTTTCCATCTCGCCG TERM 225 217788 - 217751 - R 95 -15.1 -3.35813 | gap 1, overlap 217754 TTGGACTTTAAGCAA GCATTTATCGCGCAAACC GCC GGATTGCGCGATAAAT-C AGGGGTCTCGCCGAT TERM 226 217786 - 217754 - R 95 -17.9 -2.84574 | overlap 217751 GACTTTAAGCAAGCA TTTATCGCGCAAACC GCC GGATTGCGCGATAAA TCAGGGGTCTCGCCG Atu3205 218607 - 217813 - | hypothetical protein TERM 227 218461 - 218447 - G 78 -7 -4.58685 | overlap 218449 AAAGTCTCGGAAAAA CCGGTC ATC GGCCGG GCGATGATCCAGGCC Atu3206 219772 - 218729 - | hypothetical protein TERM 228 220139 - 220150 + G 76 -7.2 -4.47328 | opp_overlap 220132 CAAGACTATCGGCGG CCGG ACTC CCGG TTTTCTGATGAACTT TERM 229 220214 - 220235 + G 78 -2.1 -5.07275 | gap 1, overlap 220220 CGCCGCGGTTCAATT CGGCGAGGCC TGT GGACG-GCCG TTTTTATCTATCTGC Atu3207 220091 - 222085 + | GGDEF family protein Atu3208 223169 - 222123 - | putative malate dehydrogenase TERM 230 222423 - 222400 - G 70 -5.2 -4.56597 | gap 1, overlap 222402 CGCGGCGTTGAAAAA TCCGGCCCGCC CAT GG-GGGCGAGA TCGAAACTGAGCCTC TERM 231 223150 - 223130 - G 85 -6.7 -4.84359 | overlap 223131 CGACGGCCAGAAAAA CGGCGCGGC AGA ACCGCTCCA ACTCGTCCAGCCTCG TERM 232 223380 - 223403 + r 75 -12.4 -2.87931 | opp_overlap 223371 223375 ATCTAAGAAGTCCCT TCCACGTCGC ACAC GCGACGTGGC TGTATGCCGGGTCGA Atu3210 226213 - 223481 - | putative ftsk cell division protein TERM 233 224281 - 224295 + g 74 -12.8 -3.23452 | overlap 224276 TCTCCCCCTTCGCGC GGGCGG CAG CCGCCC TTGCATTGTAACCGT TERM 234 226363 - 226377 + H 87 -8.6 -4.65895 | AAGCCGCTCATTTTA CTGGAT TAA ATCCAG TTTTTGGGTGGCGCC Atu3212 226501 - 228198 + | ABC transporter, substrate binding protein (oligopeptide) Atu3213 228208 - 229197 + | ABC transporter, membrane spanning protein (oligopeptide) Atu3214 229194 - 230024 + | ABC transporter, membrane spanning protein (oligopeptide) Atu3215 230021 - 230824 + | ABC transporter, nucleotide binding/ATPase protein (oligopeptide) TERM 235 231225 - 231182 - g 80 -10.2 -4.11394 | gap 1, opp_overlap 231195 ACCGTATCGTTAAAA GACGCGACCGTG-CGGCGGAA ATA TCCCGCCTTCTCGATCGTGTC GGCCTGCCCGCCGCC Atu3216 230821 - 231606 + | ABC transporter, nucleotide binding/ATPase protein (oligopeptide) aspC 231610 - 232728 + | aspartate aminotransferase Atu3218 233129 - 232854 - | hypothetical protein TERM 236 233225 - 233242 + H 84 -12.7 -3.42078 | CCCCCTTAGCGTCAT CCTCGGC CTGT GCCGAGG TTCTAATCACGTCTA Atu8029 233299 - 233427 + | hypothetical protein TERM 237 233486 - 233458 - T 74 -9.6 -3.63073 | opp_overlap 233461, overlap 233459 CACAGGCGGGAATAA CGATGGAGAGGA GCAAG CCCTCCCCATCA TTGAAACGTCAACCA ilvD 235320 - 233509 - | dihydroxy-acid dehydratase Atu3221 235564 - 235752 + | hypothetical protein Atu3222 235845 - 236804 + | ABC transporter, substrate binding protein (ribose) TERM 238 236810 - 236852 + F 71 -8.4 -3.78934 | gap 1, opp_overlap 236809 GGGTTACTAAGCCAT TTCTTCGA-GGAGCGGCAC CTCCCC GTGCCGCTCCGTCGTCGCA TTCTTATCCGGGACC Atu3223 236874 - 238397 + | ABC transporter, nucleotide binding/ATPase protein (ribose) Atu3224 238394 - 239440 + | ABC transporter, membrane spanning protein (ribose) Atu3225 239437 - 240417 + | inner membrane ABC transporter permease protein YjfF Atu3226 240435 - 241169 + | GntR family transcriptional regulator TERM 239 241173 - 241191 + F 71 -11.6 -2.89742 | opp_overlap 241151 241165 AAGACGACCTGAAGG CGCGCGCC TCT GGCGCGGG TGTCTGCGCCTTGCC TERM 240 241448 - 241478 + G 76 -8.8 -4.07568 | GCGTGGAGTATGGCC GCTGCCGCCTGGCG ACA CCCTGGGCGACGGC TTTTCCCGAACAGGA Atu3227 241387 - 242325 + | AraC family transcriptional regulator dnaE 245608 - 242333 - | DNA polymerase III, alpha chain TERM 241 243531 - 243541 + g 75 -2.4 -4.90917 | CCATTCGCCACCATG CCGG TGA CCAG TTTTTCCTTGAATTT Atu3229 247023 - 245605 - | hypothetical protein TERM 242 245923 - 245886 - G 84 -9.7 -4.56597 | gap 1, opp_overlap 245885, overlap 245888 CCGGCCTTGCAAAAA GCCGGACCGGGCGCGGCC AGT GGCCGGGCC-AGCCGAGC GTATCCTCAGGCGCA TERM 243 246941 - 246976 + g 72 -11.8 -3.29144 | gap 1 TGCGCCTTGCTGACC GGCGTGCCGGGCCGG ATGCCCG CCGCCCTGGC-CGCC TTGTCGAGCGCCTGC Atu3230 247801 - 247037 - | hypothetical protein Atu8184 247959 - 248372 + | hypothetical protein TERM 244 249161 - 249197 + G 72 -11.6 -3.40899 | gap 2 CTTGCCCTGCAGGCG GCGGCGTATGAGGCCGTG AAG CTCGGCCT-G-ACGCCGC TTATCCTCGGGGATT Atu3232 248369 - 249649 + | hydroxypyruvate reductase Atu8185 249754 - 250017 + | hypothetical protein TERM 245 250094 - 250064 - T 74 -10.5 -3.60296 | gap 1, opp_overlap 250076, overlap 250069 250072 GAGGCGTATCGCAAA GGAAAGAAGCGAGC GGAG GC-CGCTTCTCCCC CGAGGGGGAGAAGAA TERM 246 250089 - 250069 - T 71 -7.6 -4.07246 | gap 1, opp_overlap 250076, overlap 250064 250072 GTATCGCAAAGGAAA GAAGCGAGC GGAG GC-CGCTTC TCCCCCGAGGGGGAG Atu3234 251316 - 250129 - | NAD binding oxidoreductase Atu3235 252390 - 251338 - | hypothetical protein TERM 247 252421 - 252432 + r 100 -7.2 -5.24129 | overlap 252420 CATCGATACAGTTGC GCGG TAAC CCGC TTTTTTCTCCAGCGC TERM 248 252552 - 252523 - R 74 -4.9 -4.7373 | gap 1, overlap 252524 252527 252541 GCACTCCACTAAAAA TGCA-CATGGCGCT TAA AGCGCCAGGCCGCT CGCCCTGTCGAAGAC TERM 249 252547 - 252527 - R 71 -11.1 -2.86601 | overlap 252524 252523 252541 TCCACTAAAAATGCA CATGGCGCT TAA AGCGCCAGG CCGCTCGCCCTGTCG Atu3236 253608 - 252535 - | ABC transporter, nucleotide binding/ATPase protein (sugar) TERM 250 253239 - 253285 + g 85 -8.7 -4.62069 | gap 2, opp_overlap 253233 GATCCAGAAGCTTGC CGAGATCGAGCA-TGCG-GGCGG CTT CCGCCACGCGCTCCTCGATGACG TTTTTCGGCTGGCCG Atu3237 254474 - 253626 - | ABC transporter, membrane spanning protein (sugar) TERM 251 254175 - 254160 - G 76 -5.4 -4.63527 | GGACGAGCCGAAAAA CTTCAC ATGC GCGAAG GTGAAAGCCGCCATG Atu3238 255399 - 254467 - | ABC transporter, membrane spanning protein (sugar) TERM 252 255455 - 255427 - R 79 -13.1 -2.91912 | TCATGGAGGCAGATA GGCGGCGCCAC ATATTCG GCGGCGCCACC ATGGAAATCGTCAGA Atu3239 256772 - 255471 - | ABC transporter, substrate binding protein (sugar) TERM 253 255623 - 255654 + g 76 -7.2 -4.56597 | gap 1, overlap 255625 GCCAGGTGGAGGCGG CAAGCTGCTTGGCGG AAT CCG-CGAGCAGCGGG TTTTTCACCGCACCG TERM 254 255759 - 255774 + g 71 -9 -3.71848 | opp_overlap 255758 255755, overlap 255748 GGTCGCGAAATCGAT CGCTTC CTTG GAAGCG TTCTTGGTGAGCGCC TERM 255 257783 - 257799 + G 76 -9.4 -4.07687 | GCCATTCTTGGCTCT CGTCCG GTGGA CGGACG TTTTGCCGAGGCGAT Atu3240 256967 - 258166 + | ROK family transcriptional regulator Atu3241 258219 - 259319 + | dehydrogenase Atu3242 259337 - 259978 + | hypothetical protein TERM 256 259991 - 260012 + T 83 -13 -3.18728 | TAACGGTTGCATCGA GAGCGGCC CTGAAA GGCCGCTC TTCCATCTTACCAGT gatA 261381 - 260020 - | hypothetical protein TERM 257 260691 - 260651 - G 91 -13.9 -3.87373 | overlap 260638 260635 GACACGCCGGACAAA GGCATGCGCGCCAGATCCG CAG CCGTTCTGCCGCGCATGGC GGCATCCACCCAGAC TERM 258 262566 - 262524 - g 89 -11.3 -4.15044 | TTGCCCGCGAAGAAA CCGACGTCGTCACACCGTT TCAGG AACGACGGGACGAGATCGG CGATATGGCGACCGC TERM 259 263532 - 263519 - g 70 -3.7 -4.62069 | overlap 263520 263521 CGGGCATTGGAAAAA TCCGG CTTC CCGGC CGAGCGGCTGGAGCT Atu3244 261692 - 264010 + | GGDEF family protein TERM 260 264160 - 264150 - g 72 -2.4 -4.7416 | overlap 264142 264141 CCAAAACCGCAAAAA TCCG TAT CGGT TATCGCGAGGCCGAA Atu3245 264041 - 264934 + | ABC transporter, substrate binding protein (amino acid) Atu3246 265006 - 265908 + | ABC transporter, substrate binding protein (amino acid) TERM 261 265941 - 265906 - T 70 -9.7 -3.3452 | opp_overlap 265909, overlap 265909 265913 GATACGACGGCAGAA TGAGAAACGCCGCCC GGAGGT GGGCGGAGTCTCTTA TCAAGTGCCTTATGC TERM 262 265909 - 265938 + T 70 -9.9 -3.33969 | opp_overlap 265906 265909 265913 ACGACGGCAGAATGA GAAACGCCGCCCG GAGG TGGGCGGAGTCTC TTATCAAGTGCCTTA TERM 263 265934 - 265913 - T 77 -8.6 -4.1021 | opp_overlap 265909, overlap 265909 265906 CGGCAGAATGAGAAA CGCCGCCC GGAGGT GGGCGGAG TCTCTTATCAAGTGC minE 266211 - 265951 - | cell division topological specificity factor MinE minD 267023 - 266208 - | cell division inhibitor minC 267778 - 267059 - | septum formation inhibitor Atu3250 268083 - 267841 - | hypothetical protein TERM 264 268584 - 268569 - g 78 -6.8 -4.58283 | gap 1, opp_overlap 268573 GAACTGGCGGAAAAA CGGCTCG CGG CG-GCCG GCATCACACCGCCAC Atu3251 268197 - 268883 + | haloacid dehalogenase-like hydrolase exuR 269049 - 269765 + | GntR family transcriptional regulator Atu3253 269828 - 270802 + | ABC transporter, substrate binding protein Atu3254 270863 - 271435 + | ABC transporter, nucleotide binding/ATPase protein (dicarboxylate) Atu3255 271503 - 272846 + | ABC transporter, membrane spanning protein (dicarboxylate) TERM 265 272861 - 272882 + F 95 -15.1 -3.45366 | opp_overlap 272858 AGGCAAACATCATCG CCCGCGCGG TTCG CCGTGCGGG TTCATTCCTTCCACA Atu3256 272922 - 273968 + | zinc-binding dehydrogenase uxuA 273985 - 275193 + | mannonate dehydratase TERM 266 275235 - 275203 - T 100 -15 -4.11216 | gap 1 GGCTGAGCGGGAAAA TTGACCGCAGGC-GA TGCG TCAGCCTGCGGCCAA CCGCGCCCGGAACGT Atu3258 275643 - 275221 - | hypothetical protein Atu3259 275818 - 277329 + | dehydrogenase TERM 267 277365 - 277332 - T 100 -18.3 -4.10925 | opp_overlap 277337, overlap 277337 AGACATCCGCTAAAA CAAAAGGGAAGGCGC AAAA GCGCCTTCCCTTTCA CGTCCGATGCGGCTG TERM 268 277337 - 277360 + T 100 -18.2 -3.60627 | opp_overlap 277332 277337 TCCGCTAAAACAAAA GGGAAGGCGC AAAA GCGCCTTCCC TTTCACGTCCGATGC TERM 269 277360 - 277337 - T 100 -18.2 -5.07652 | opp_overlap 277337, overlap 277332 TCCGCTAAAACAAAA GGGAAGGCGC AAAA GCGCCTTCCC TTTCACGTCCGATGC TERM 270 277395 - 277407 + T 74 -7.7 -4.07568 | GACTCAGATAGACTG GATCG CTT CGATC TTTTCGAGACCGCCG Atu3260 278381 - 277383 - | ABC transporter, substrate binding protein TERM 271 277581 - 277602 + g 71 -5.9 -4.32034 | gap 1 ACGGGCACCTTCGCT GGAGG-CTTC CAA GAAGACCTTC TTTTCCTCATCGTCC Atu3261 280218 - 278398 - | ABC transporter, membrane spanning protein TERM 272 279133 - 279118 - G 73 -4.6 -4.58395 | overlap 279119 279120 CCCACCGGCGAAAAA GCCGCC GACC AGCAGC GAGCCCACCGAAAGA TERM 273 279807 - 279788 - G 78 -6.4 -4.63218 | CCTGCGCCAAGAAAA CCGAAACG CACC CATTCCGG CAGGCCGAGCGTCGG Atu3262 282154 - 280319 - | ABC transporter, nucleotide binding/ATPase protein selA 283406 - 282210 - | L-seryl-tRNA(Ser) selenium transferase TERM 274 282938 - 282949 + g 89 -7.2 -5.1101 | opp_overlap 282938 GCGAGACCACATAGA CCGC TGCC GCGG TTTTTTCAGTGATGG TERM 275 283809 - 283842 + G 79 -15.5 -2.69151 | overlap 283805 CCTATGCGCGCTCGC TGGATTTCATGGGTG TCGC CACCCATGAAATGCA TGATCTGTGCCGCCA TERM 276 284108 - 284118 + G 75 -8.2 -4.25283 | overlap 284106 ACCCTGTCGCAATCG GCGG CGG CCGC TTTTCATGACCGCCT Atu3264 283481 - 284332 + | IclR family transcriptional regulator Atu3265 284821 - 284339 - | hypothetical protein Atu3266 286140 - 284917 - | dihydroorotase TERM 277 285105 - 285130 + g 71 -6.8 -4.2349 | gap 1, opp_overlap 285104 285105 CGAAAACCGTAAAAT CCGCC-CGCTG GCCGA CATCGAGGCGG TTTTCCATGTCAAGG TERM 278 285524 - 285504 - G 73 -8.9 -3.86346 | overlap 285505 GCACCTCGTCATAAA GTGCGGGCG GTT CGCCCACAT GCACCATCATCGGCA TERM 279 285523 - 285505 - G 70 -12.4 -2.91593 | overlap 285504 CACCTCGTCATAAAG TGCGGGCG GTT CGCCCACA TGCACCATCATCGGC Atu3267 287017 - 286142 - | ABC transporter, membrane spanning protein (dipeptide) Atu3268 287925 - 287017 - | ABC transporter, membrane spanning protein (dipeptide) TERM 280 288272 - 288246 - R 76 -10.8 -3.72695 | AGGTCCGGCATGAAA GAGCGCCGGA TGCAAAG CCCGGCGCCC GATTGCCAACCAGTC Atu3269 289814 - 288288 - | ABC transporter, substrate binding protein (dipeptide) TERM 281 288383 - 288415 + g 93 -7.8 -5.055 | gap 1, overlap 288367 CGGCGTTGAAGTCGC CGATCT-TGATGAGC GGCA GCTCGGCATAGATCG TTTTTTGCACATTGG TERM 282 288437 - 288447 + g 71 -8.2 -4.11394 | GCACATTGGCCCACA GCGC AAG GCGC TTTTCCGGATCGGCT Atu3270 290116 - 289874 - | hypothetical protein TERM 283 291049 - 291066 + G 70 -3.3 -4.59773 | opp_overlap 291046 291044 TTCACAAATACATGG CGGAAGC CAAG GCATTCG TTTTTGCCGCTGAAG Atu3271 290253 - 291377 + | glycosyltransferase pssN 291854 - 293050 + | exopolysaccharide export protein TERM 284 293078 - 293099 + F 100 -12.9 -5.26875 | opp_overlap 293078 CGACGCCCCATCAAA GCCGCCCCG GAAA CGAGGCGGC TTTTTTCATTGGCCG TERM 285 293099 - 293078 - f 95 -15.1 -3.73224 | opp_overlap 293078 CGACGCCCCATCAAA GCCGCCCCG GAAA CGAGGCGGC TTTTTTCATTGGCCG TERM 286 294145 - 294122 - g 74 -3.9 -4.77173 | gap 2 GCGTGACAAAAGAAA CCGCCGTTGAT GTCG ATC--CGGCGG CGACGGGGGGCGAGC TERM 287 294166 - 294179 + G 74 -5.9 -4.57569 | overlap 294150 GGGGGCGAGCCCATG CGCGG CGTC CTGCG TTTTTACGACAATGC Atu3273 293317 - 294594 + | HlyD family secretion protein TERM 288 295859 - 295836 - g 76 -5.3 -4.72272 | CGGCTGCATGAAAAA GGCCTGCC-CA TGCG TGAGGC-GGCC TTGCAGGGGGCGGCG TERM 289 297372 - 297353 - g 89 -7.2 -5.07486 | gap 1, overlap 297355 TATCGTGAAGAAAAA CG-CGATCA TGA TGATCGACG TGGCGGTGGAGTTGA Atu3274 294591 - 297731 + | AcrB/AcrD/AcrF family protein TERM 290 297767 - 297736 - T 81 -14.5 -2.52464 | opp_overlap 297735 297734 TGGCGGCCTAACGCA CTTCCCCGAGGCG TTTCAG CGCCTCGGGAAAA CCTTTGCCCTGCAGC ialB 298306 - 297728 - | invasion associated protein B TERM 291 298327 - 298313 - R 74 -8.6 -3.96327 | opp_overlap 298325 ATGTCCCATCAGAAA CGAACT CCA AGTTCG GCGGCAGCGGATTGA Atu3276 302331 - 298306 - | hypothetical protein TERM 292 300766 - 300746 - G 95 -4.5 -5.626 | overlap 300748 TATCCGACAAAAAAA GTGCCGGTC ATC GCCCAGCTC GATCCGTCGCCCGTT TERM 293 302449 - 302427 - R 100 -14.9 -4.49352 | opp_overlap 302431 AGACGAAAACAGAAA CGGAGCACG ACAGG CGTGCTCCG TTAAACAACCAAGAG TERM 294 302479 - 302505 + r 72 -11.6 -3.14878 | opp_overlap 302469 302486, overlap 302483 302486 GTAAATCTCTCTCGA GATCGAACGGGA AAA TCCCGTTCTGTC TATTGCCTTGAAAAA TERM 295 302483 - 302501 + r 84 -13.2 -3.12529 | opp_overlap 302486, overlap 302479 302486 ATCTCTCTCGAGATC GAACGGGA AAA TCCCGTTC TGTCTATTGCCTTGA TERM 296 302486 - 302498 + r 70 -9.1 -3.69364 | opp_overlap 302486, overlap 302483 302479 TCTCTCGAGATCGAA CGGGA AAA TCCCG TTCTGTCTATTGCCT Atu3277 303029 - 302505 - | nitrilotriacetate monooxygenase Atu3278 303922 - 303029 - | aryl-alcohol dehydrogenase Atu3279 305079 - 303922 - | methanesulfonate sulfonatase TERM 297 304915 - 304929 + g 100 -11.4 -5.04385 | overlap 304909 GAGAATGTTGCGGAA GCCGAG TTC CTCGGC TTTTTTGACGATATC Atu3280 305181 - 305885 + | GntR family transcriptional regulator TERM 298 305951 - 305963 + F 90 -10.5 -4.22535 | opp_overlap 305940 305943, overlap 305948 GCAAGCACGCCACGG CCCGC GCT GCGGG TTATTTTGCAGTTAT TERM 299 306888 - 306914 + G 71 -9.4 -3.76224 | opp_overlap 306888 GGATGAGGTTTATAA CCGCCCGGAAAG CGT CTTTGTGGGTGG TTTCGTCGGTGCGCC Atu3281 306220 - 307296 + | ABC transporter, nucleotide binding/ATPase protein TERM 300 307384 - 307361 - g 71 -6.7 -4.2535 | opp_overlap 307368, overlap 307375 ACATGACACTTAAAA CCATCAGGG GCAAAG CCCTTATGG GCGCAGCGCTCTGCG Atu3282 307348 - 308598 + | ABC transporter, substrate binding protein (sugar) TERM 301 308604 - 308643 + F 77 -11.5 -3.59979 | gap 1, opp_overlap 308600, overlap 308605 308607 308615 TCTGCGCTAAACTTC AGGCCGGAAGGCGGCATG CGCGC CATGCC-CTTTCCGGTCG TTTCGACTGACAGGA TERM 302 308605 - 308642 + F 83 -15 -2.75844 | gap 1, opp_overlap 308600, overlap 308604 308607 308615 CTGCGCTAAACTTCA GGCCGGAAGGCGGCATG CGCGC CATGCC-CTTTCCGGTC GTTTCGACTGACAGG TERM 303 308607 - 308640 + F 86 -14 -2.92613 | gap 1, opp_overlap 308600, overlap 308605 308604 308615 GCGCTAAACTTCAGG CCGGAAGGCGGCATG CGCGC CATGCC-CTTTCCGG TCGTTTCGACTGACA TERM 304 308677 - 308664 - f 71 -5.9 -4.29508 | ACTGACAGGAATAAA GCCGC CTGA ACGGC GCGATAAACGGGCCG malF 308758 - 309684 + | ABC transporter, membrane spanning protein (sugar) malG 309689 - 310546 + | ABC transporter, membrane spanning protein (sugar) TERM 305 312262 - 312251 - g 78 -7.2 -4.58395 | overlap 312226 312253 CCGAGGCCGCAAAAA CCGG CCTG CCGG TGCAGCGACCCCTAT TERM 306 312492 - 312470 - g 77 -11.3 -3.5627 | gap 1, opp_overlap 312470 312483 ACATCACCGTCGAAA CACCGCTCGG AGAG CCG-GCGGTG TTCTATCGTGCCGAT TERM 307 312470 - 312492 + G 74 -11.3 -3.54653 | gap 1, opp_overlap 312470, overlap 312483 ACATCACCGTCGAAA CACCGCTCGG AGAG CCG-GCGGTG TTCTATCGTGCCGAT Atu3285 310558 - 312552 + | alpha-glucosidase TERM 308 312567 - 312607 + F 100 -16.1 -3.21099 | overlap 312577 AAGGCTAGAGGTTTC GTCCTTGCCATCACCCCGC CAG GCGGGGTGATGTGATGGGC TTCCTCCTGCGACAG TERM 309 312577 - 312597 + F 90 -16.9 -2.81173 | overlap 312567 GTTTCGTCCTTGCCA TCACCCCGC CAG GCGGGGTGA TGTGATGGGCTTCCT TERM 310 312968 - 312980 + F 70 -9.1 -3.70902 | AAACCTTCCGTCCTC CGCAC ATG GTGCG TTTGCGTCTGAGGCC Atu3286 313002 - 313787 + | ABC transporter, membrane spanning protein Atu3287 313838 - 314734 + | thiamine biosynthesis associated protein TERM 311 315262 - 315279 + G 78 -10.5 -3.87815 | overlap 315252 ACGGGCTGCCTTTCG GGCGGTG TCAT CGCCGCC TTTATGGCAGTGGAA Atu3288 314731 - 315471 + | hydroxyethylthiazole kinase TERM 312 315634 - 315613 - g 79 -9.4 -4.22652 | gap 1 GGAGATGATCGAAAA CGCC-CGCG CCATT CGCGAGGCG ATCGGCGGCACCGGC Atu3289 315458 - 316120 + | thiamine-phosphate pyrophosphorylase TERM 313 316762 - 316731 - g 85 -2.2 -5.36441 | gap 1 GGTGGAGACAAAAAA CGACCACG-GCAC CGGCTGC ACGCTCGCGGCCG CCATTACGGCTCACC thiD 316117 - 316914 + | phosphomethylpyrimidine kinase Atu3291 317589 - 317131 - | Lpr family transcriptional regulator TERM 314 318281 - 318333 + G 70 -3.1 -4.66833 | overlap 318301 GTTTCCAATGCCGCG CAGCTCGCCGTGATGCGCAAGGCCG CCA CCGCCTTTCCCGAGACGCCGGTCTG TTTTTCCAATTCGGG alr 317717 - 318883 + | alanine racemase dadA 318891 - 320147 + | D-amino acid dehydrogenase small subunit TERM 315 320194 - 320162 - T 100 -13.5 -4.66938 | gap 2, opp_overlap 320184, overlap 320164 320180 320181 AGGCGGAATAGAAAA GCC-CCC-TCCCGCC GACAA GGCGGGACGGGCGGC GATCAAAGCGCCAGC TERM 316 320190 - 320164 - T 83 -15.1 -2.63182 | opp_overlap 320184, overlap 320162 320180 320181 GCGGAATAGAAAAGC CCCCTCCCGCC GACAA GGCGGGACGGG CGGCGATCAAAGCGC TERM 317 320184 - 320233 + T 84 -13.6 -3.14564 | gap 2, opp_overlap 320164 320162 320181 320180 320202 CCCGCCGACAAGGCG GGACGGGC-GGCGATCAAAG-CGC CAGC GCGTCCTTGAGCGCCAGCCCCTCC TTCATGCGAAGGTCG Atu3294 320907 - 320197 - | GntR family transcriptional regulator TERM 318 320507 - 320474 - G 75 -7.9 -4.15833 | opp_overlap 320458, overlap 320475 AGCATCAGGTGAAAA TCGCCCGACGCCCTG ATCT CCGCGCGTCTGGCGG TTGGGCCGCGCTCCA TERM 319 320565 - 320582 + g 80 -4.1 -5.08824 | gap 1, overlap 320554 GTTCCCTCAGCTTCT TCGCCGCC GCT GG-GGTGA TTTTTTCGATCGCCG Atu3295 321087 - 321599 + | hypothetical protein TERM 320 321640 - 321663 + T 91 -11.6 -4.24204 | AGCCGTTATTGTCAG GCCGCGGGCG GAAA CGTCCACGGC TTTTCCATCTGCATC dctD 323052 - 321688 - | two component response regulator for C4-dicarboxylate transport TERM 321 321967 - 321950 - G 71 -7.7 -4.07687 | opp_overlap 321941 321940 ACCCTTTCGGCAAAA TGCCCGA GTTC TCGGACA TTGCCCGGCCAGTCG dctB 324436 - 323054 - | two component sensor kinase for C4-dicarboxylate transport TERM 322 323093 - 323082 - G 74 -3.6 -4.73448 | AGATATACGGAAAAA GACG TGCC CGCC CCACTGCTCGTCACC TERM 323 323460 - 323439 - G 74 -5.7 -4.56775 | overlap 323452 ATCTGCCCGGAAAAA CGGCTGCGC AACA GCACGACCG CGCCTTCGATGACCA TERM 324 325167 - 325147 - g 70 -12.5 -2.86728 | opp_overlap 325151, overlap 325134 325133 ATGATCGACAGCACA GCCGTGGCC GCA GGCCACGCC AAGCAGCCATTCTAC dctA 325132 - 326478 + | C4-dicarboxylate transporter DctA TERM 325 326561 - 326533 - f 91 -14.5 -3.14683 | opp_overlap 326533 ACAGGCCCGCATGAA GGCCGGCGTATCC TGT GGATGCGTCGGCC TTTCATCGTTCCGGC TERM 326 326533 - 326561 + F 100 -18.9 -3.84246 | opp_overlap 326533 ACAGGCCCGCATGAA GGCCGGCGTATCC TGT GGATGCGTCGGCC TTTCATCGTTCCGGC Atu3299 326656 - 327093 + | hypothetical protein TERM 327 327122 - 327096 - T 100 -18 -3.48924 | overlap 327097 GTATCGCGGATAGAA GGCATCGGCCGG ATA CCGGCCGATGCG ATCCCCAACTCCTCA TERM 328 327121 - 327097 - T 100 -21.5 -2.6914 | overlap 327096 TATCGCGGATAGAAG GCATCGGCCGG ATA CCGGCCGATGC GATCCCCAACTCCTC Atu3300 328487 - 327135 - | aminotransferase TERM 329 328394 - 328404 + g 71 -6.8 -4.24002 | CGCTTTCGATCACCA GACC GCC GGTC TTTTCGAATTTGCGC fixR 329244 - 328525 - | short-chain alcohol dehydrogenase TERM 330 329659 - 329685 + G 78 -7.3 -4.66833 | gap 1, overlap 329658 CTGGCGCTGCGCGAG CGC-ACGGAAGG CTCG CCTTACGTGGCG TTTTTCCCCTTGCGC celD 329494 - 331140 + | cellulose biosynthesis protein TERM 331 331853 - 331880 + G 70 -4.1 -4.68593 | gap 1, overlap 331837 CGGCTCTGGCCGAAC TC-GGTTCCGGC TTCCC GCCCGAGCCCGA TTTTTCGATGGTGAC TERM 332 332187 - 332157 - g 72 -11.9 -3.33009 | gap 1, opp_overlap 332156 332155 332180 GAAAATTCCCTACAA TTCGGAGGCTCTGC CCAT GCGG-GCCTCCGAA GATTTCGGCCGTTTC celE 331201 - 332355 + | cellulose synthesis protein celG 334626 - 332380 - | cellulose synthesis protein TERM 333 333336 - 333362 + g 90 -14.5 -3.53444 | gap 1, overlap 333334 AGCCGAATTGCTGCG CGGTGGC-CGCA TCCT TGCGCGCCACCG TTTCCCCGGCAATGC TERM 334 333812 - 333822 + g 78 -4.6 -4.8622 | AATTCCAGCTGACCG TCGG CAC CCGG TTTTTCCTTGGCCAG celC 335774 - 334719 - | endoglucanase TERM 335 335024 - 335009 - G 71 -6.8 -4.1891 | opp_overlap 335009 335015 CCCTTGCAAGATAAA GCGGTA TGCG CACCGC ATTATATCCGAATTC celB 338254 - 335771 - | celB protein TERM 336 336680 - 336669 - G 71 -7.2 -4.1964 | TCGAACAGGGCAAAA CGCG GGGT CGCG CTGGCGGGTGCGCCG TERM 337 336963 - 336948 - G 76 -6.1 -4.61231 | GCAGACGCGTAAAAA TCGGC GGGCAT GCCGA CATAAAATTCAGTGC TERM 338 337237 - 337186 - G 78 -4.2 -4.82901 | gap 1, overlap 337187 337197 337224 337229 337230 GGCCGGTGACAAAAA GCGGCGAGGAATTGCCGGGGCCGGC GTT GCCAAAACCAGCAAAGGCTC-CCGC CGATGCCTCGGGCGG celA 340440 - 338251 - | cellulose synthase Atu8187 341434 - 340535 - | hypothetical protein Atu3311 341868 - 343052 + | phosphomannose isomerase TERM 339 343102 - 343052 - T 81 -12.5 -3.11291 | gap 1, opp_overlap 343064, overlap 343044 343054 GGCAGAAGGGCAATA GACCTCGCCCACCGGGCGAGCGGC ATCG GCCGCTCG-CCGGTTTCAGAGATC AGTCAAGCCTTGGCC TERM 340 343064 - 343091 + T 100 -18.4 -3.55761 | opp_overlap 343054 343044 343052 ATAGACCTCGCCCAC CGGGCGAGCGGC ATCG GCCGCTCGCCGG TTTCAGAGATCAGTC Atu3312 344067 - 343105 - | hypothetical protein TERM 341 343636 - 343660 + g 78 -10.7 -3.85864 | GCTCTTCATCGCCGA CATGCGTGCGA CGA TCGCCTGCATG TTCTTGTCGTAATCG Atu3313 344584 - 344081 - | hypothetical protein TERM 342 344249 - 344287 + g 73 -10.8 -3.57144 | opp_overlap 344258 GCCGATGCGGCCGTG GTCGAAGCAGGTATCGGC CTT GCCGCTTCCCGCCTCGGC TTTCCAGGTGGCGCG TERM 343 344562 - 344550 - G 71 -9.1 -3.8381 | opp_overlap 344550 344549 AGACACAGTACGAAA GCGGA GAA TCCGC ATTTGCTTATTGTTG Atu3314 346536 - 344599 - | cellulose synthase galE 347516 - 346533 - | UDP-glucose 4-epimerase TERM 344 346669 - 346649 - G 70 -10.3 -3.4582 | opp_overlap 346648, overlap 346647 TGATGTCAGCAAAGA GCGCGGGCG GAT CGCCGGCAC GTCTTGCGCCGAAAT Atu3316 348540 - 347518 - | dTDP-glucose 4-6-dehydratase Atu3317 348935 - 349285 + | hypothetical protein TERM 345 349358 - 349300 - T 100 -17 -4.2461 | gap 3, opp_overlap 349312 349315, overlap 349262 349312 AGCCTCAGGAAGAAA TCTTGGAACCAACTG-GCGTCAGGTCGGC CAAG GCCGACCTGACGCTCAGTTCGT-CCA-GC CGGAGAAGGTCGCGT TERM 346 349312 - 349348 + T 100 -23.2 -3.14132 | gap 1, opp_overlap 349300 349312, overlap 349315 AAATCTTGGAACCAA CTG-GCGTCAGGTCGGC CAAG GCCGACCTGACGCTCAG TTCGTCCAGCCGGAG TERM 347 349348 - 349312 - T 100 -23.2 -3.35088 | gap 1, opp_overlap 349312 349315, overlap 349300 AAATCTTGGAACCAA CTG-GCGTCAGGTCGGC CAAG GCCGACCTGACGCTCAG TTCGTCCAGCCGGAG TERM 348 349315 - 349344 + T 100 -23.7 -2.56596 | opp_overlap 349312 349300, overlap 349312 TCTTGGAACCAACTG GCGTCAGGTCGGC CAAG GCCGACCTGACGC TCAGTTCGTCCAGCC Atu3318 350115 - 349345 - | LuxR family transcriptional regulator TERM 349 349408 - 349423 + g 80 -10.4 -4.08806 | ACGCGATGCCGCCTC CGTGCG GTTG CGCACG TTCATTTTTTTATAG TERM 350 350277 - 350292 + H 76 -3.2 -5.09426 | AGCTGTGTAAATAAA TGGCCC AAAC GGGTTA TTTTTTACAATTGAC TERM 351 350531 - 350547 + G 100 -5.8 -5.87688 | gap 1, opp_overlap 350524 350523, overlap 350524 AAAAACAGCCGTCCT GCCCAGC AGAA GC-GGGC TTTTTTTTGCGTTCT Atu3319 350386 - 350631 + | hypothetical protein Atu3320 351017 - 351982 + | fibrinogen binding protein TERM 352 352032 - 352003 - f 100 -17.9 -4.25283 | overlap 351987 352006 ACCTCTCTACGAAAA GAGCTGCACCGGC ACCC GCCGGTGCAGTTC GCGGTTAAAAGACCG TERM 353 352029 - 352006 - f 95 -18.2 -2.83504 | overlap 351987 352003 TCTCTACGAAAAGAG CTGCACCGGC ACCC GCCGGTGCAG TTCGCGGTTAAAAGA TERM 354 352923 - 352912 - g 80 -3.6 -5.04987 | AAGAGCCGGAAAAAA GCGA TGTG CCGC TGCATGAGGACAGCC TERM 355 353927 - 353937 + G 75 -8.2 -4.1822 | overlap 353925 CCCTACCACCTATGT CGCC GGC GGCG TTTATTCCGATGCCA Atu3321 352131 - 354152 + | hypothetical protein TERM 356 355129 - 355139 + G 83 -2.4 -5.22006 | CTTTCTCGACGCACC GCTG ATG CCGC TTTTTATTGTAGTGG Atu3322 354773 - 356428 + | ABC transporter, nucleotide binding/ATPase protein TERM 357 356467 - 356454 - g 85 -5.9 -5.1356 | overlap 356455 GTTCACGAAGAAAAA CGCCG TCAC CGACG TCAAACCCCAGGGCC TERM 358 357035 - 357022 - g 73 -4.5 -4.60487 | opp_overlap 357030 TATGACGGTCAAAAA CAGTC CTTC GACCG GCAACTGGCGCTTTT Atu3323 356437 - 357795 + | HlyD family secretion protein TERM 359 357821 - 357801 - f 71 -6.2 -4.36433 | GGAAAGATGAAGAAA TAACAGTG GTATA CACTGTCA ATCGCGCGCCGGTCG TERM 360 358193 - 358182 - g 78 -7.2 -4.72272 | overlap 358189 358190 TCTTTCGATGAAAAA GGCG AAAT CGCC AGCACGCAACTGATG TERM 361 358300 - 358290 - g 70 -3.2 -4.60487 | GAGCACCTTGAAAAA TCGA TCG CCGA TATCGTCGCGGTGAG Atu3324 357879 - 358373 + | hypothetical protein exoQ 359638 - 358370 - | exopolysaccharide production protein exoF 360902 - 359646 - | exopolysaccharide production protein TERM 362 360339 - 360366 + g 81 -13.4 -3.40403 | opp_overlap 360333, overlap 360342 360364 GGCGATCAACCGCGC CTGGCGGGCGAG CAAC CTTGCCCGCTGG TTGTCGTAGACGGCG TERM 363 360342 - 360363 + g 75 -13.7 -2.86271 | opp_overlap 360333, overlap 360339 GATCAACCGCGCCTG GCGGGCGAG CAAC CTTGCCCGC TGGTTGTCGTAGACG exoY 361776 - 361096 - | succinoglycan exopolysaccharide synthesis protein TERM 364 362003 - 361974 - R 85 -4.3 -5.24129 | gap 1, opp_overlap 361982, overlap 361975 CGGTTGCATAAAAAA GCAACAAATGTGCC GAC GGC-CATGTGTTGA GAGCATGGGTGACGC Atu8030 362380 - 362198 - | hypothetical protein TERM 365 362244 - 362229 - G 83 -4.7 -5.06414 | CTGCGCCAATAAAAA GCGAT GGAAAA ATCGC AACAAGGGCGCAAAG Atu3328 362944 - 362396 - | aldehyde dehydrogenase-like protein TERM 366 362698 - 362676 - G 79 -12.1 -3.53811 | opp_overlap 362680, overlap 362680 CCCACCTGCCGGAAA GAAATCGGC CCCTT GCCGATTTC AACCAGTTCATCCGC TERM 367 362694 - 362680 - G 74 -7.1 -4.41348 | opp_overlap 362680, overlap 362676 CCTGCCGGAAAGAAA TCGGC CCCTT GCCGA TTTCAACCAGTTCAT bioA 363091 - 364425 + | beta alanine--pyruvate transaminase TERM 368 364476 - 364445 - f 90 -10.3 -4.29326 | opp_overlap 364450, overlap 364450 GGCAAACCTAATAAA GAAAAGGCTGCAA TAGAAT TTGCAGCCTTTTT TTGACATCAATCAAA TERM 369 364471 - 364450 - f 100 -10.2 -5.10665 | opp_overlap 364450, overlap 364445 ACCTAATAAAGAAAA GGCTGCAA TAGAAT TTGCAGCC TTTTTTTGACATCAA TERM 370 364450 - 364471 + F 100 -10.2 -5.44119 | opp_overlap 364450 364445 ACCTAATAAAGAAAA GGCTGCAA TAGAAT TTGCAGCC TTTTTTTGACATCAA TERM 371 365362 - 365350 - g 74 -5.5 -4.44046 | GCCATCGCAAATAAA GCGCT GGA AGCAC AGGCTGAAGACGCCC mclA 364570 - 366387 + | methyl-accepting chemotaxis protein TERM 372 366457 - 366479 + T 100 -17.8 -5.03994 | opp_overlap 366457 ACCTTCACATAAAAA TACCCCGGAC ATC GTCCGGGGTA TTTTTATGTGTCGCG TERM 373 366479 - 366457 - T 100 -17.8 -4.9725 | opp_overlap 366457 ACCTTCACATAAAAA TACCCCGGAC ATC GTCCGGGGTA TTTTTATGTGTCGCG Atu3331 367311 - 366526 - | hypothetical protein Atu3332 368317 - 367331 - | hypothetical protein TERM 374 368315 - 368287 - G 71 -9.5 -3.7104 | opp_overlap 368286 368287 ACGTACATGCAACAA GGCTGCCGCCG ATCGCGA CGACCGCAGCC ATTCTTACCCCTGCG Atu3333 369342 - 368557 - | 3-ketoacyl-(acyl-carrier-protein) reductase Atu3334 369572 - 369339 - | hypothetical protein Atu3335 369819 - 370400 + | 3-methyladenine DNA glycosylase TERM 375 370436 - 370426 - T 74 -8.2 -3.96216 | opp_overlap 370423 GCGCTAGGGAAAGAA CGGC TGC GCCG GACTTCTAAAGGACT Atu8031 370600 - 370442 - | hypothetical protein Atu3336 371021 - 370824 - | hypothetical protein thuR 372209 - 371196 - | LacI family transcription regulator TERM 376 372285 - 372270 - H 77 -4.8 -4.87786 | opp_overlap 372270 TCAAGCCGACAAAAA TTGAAA ACGA TTTCAA TTTTCCTCCACCTGA thuE 372478 - 373743 + | ABC transporter, substrate binding protein (trehalose/maltose) thuF 373807 - 374781 + | ABC transporter, membrane spanning protein (trehalose/maltose) thuG 374778 - 375611 + | ABC transporter, membrane spanning protein (trehalose/maltose) thuK 375622 - 376650 + | ABC transporter, nucleotide binding/ATPase protein (trehalose/maltose) TERM 377 376664 - 376687 + F 81 -11.7 -3.53012 | GAAACTTCAACTTCC GCCGGGATC ACCCAA GGTCCCGGC TTTCACCGAGGAGCA thuA 376708 - 377493 + | trehalose utilization-related protein TERM 378 377525 - 377549 + G 71 -7.1 -4.17316 | TCATTCTCGGAACTG GCGGCATGG CCAACAA CCATGCCAC TTATTTTGCGCAAAT TERM 379 378182 - 378158 - g 91 -8.6 -4.72631 | ACGAAGGGAATAAAA TTGGCGTCTA CGACC TCGACGCCAA TGACAGCTTCACCAT ThuB 377500 - 378549 + | trehalose utilization-related protein TERM 380 378580 - 378561 - T 100 -16.4 -3.73775 | opp_overlap 378544 378561 TTGAGTTGCAGGAAA GCGGCGGC GCGG GCCGCCGC TTTCACACCCCACGC TERM 381 378561 - 378580 + T 100 -16.4 -3.53012 | opp_overlap 378561, overlap 378544 TTGAGTTGCAGGAAA GCGGCGGC GCGG GCCGCCGC TTTCACACCCCACGC exsD 379338 - 378583 - | radical activating protein exsC 379691 - 379335 - | 6-pyruvoyl tetrahydropterin synthase exsB 380401 - 379691 - | succinoglycan biosynthesis regulator TERM 382 380079 - 380025 - G 78 -10.5 -3.88498 | gap 1 TCGGGATAGATGAAA TGGTCGCCGCCATGCACGGCGATCGC CACC GCATCCGCC-TGCTGGGCGGCGGCAA GGCCAAACGCGATGG TERM 383 380532 - 380497 - R 100 -14 -4.56597 | opp_overlap 380504, overlap 380499 380500 GGGTTGCGGTAAAAA CACGAAAGCGGCGAAG TCCC CTCCGCCGCTTTCCGG ATCATCCAAGCCTCA TERM 384 380530 - 380499 - R 100 -15.2 -3.90048 | opp_overlap 380504, overlap 380497 380500 GTTGCGGTAAAAACA CGAAAGCGGCGAAG TCCC CTCCGCCGCTTTCC GGATCATCCAAGCCT TERM 385 380529 - 380500 - R 100 -18.7 -2.93708 | opp_overlap 380504, overlap 380499 380497 TTGCGGTAAAAACAC GAAAGCGGCGAAG TCCC CTCCGCCGCTTTC CGGATCATCCAAGCC TERM 386 380504 - 380525 + r 77 -11.5 -3.58343 | opp_overlap 380500 380499 380497 GGTAAAAACACGAAA GCGGCGAAG TCCC CTCCGCCGC TTTCCGGATCATCCA Atu3347 381678 - 380545 - | hypothetical protein Atu3348 382466 - 381702 - | hypothetical protein Atu3349 383611 - 382523 - | ABC transporter, nucleotide binding/ATPase protein Atu3350 384558 - 383617 - | ABC transporter, membrane spanning protein Atu3351 385453 - 384551 - | ABC transporter, membrane spanning protein (sugar) Atu3352 386829 - 385597 - | ABC transporter, substrate binding protein (sugar) TERM 387 385941 - 385930 - G 77 -3.6 -4.93288 | opp_overlap 385934 AACAGGGAAATAAAA GGCG TCGC CACC GGTGGTGATATAGTC TERM 388 386291 - 386305 + g 84 -9.2 -4.56775 | CCGCCAAGCGCCAGC GGCTGG ATG CCGGCC TTTTTGAGCGCCGGT TERM 389 387018 - 387042 + r 79 -11.3 -3.6502 | overlap 387020 TCCTGCAATTTCTGC AAGGGGCGCGG CTG CCGCACCCCTA TTTGGGTAGCGGCTG TERM 390 387020 - 387040 + r 88 -13.9 -3.40597 | overlap 387018 CTGCAATTTCTGCAA GGGGCGCGG CTG CCGCACCCC TATTTGGGTAGCGGC TERM 391 387110 - 387071 - R 91 -12.2 -4.07568 | opp_overlap 387077, overlap 387073 387077 TGCTCGCCCTTAAAA CACAAAGACGAGCCGGAA CGCC TTCCGCCTCGCCTCTGTC GTGCTACCTCGAAAC TERM 392 387108 - 387073 - R 95 -14.8 -3.63744 | opp_overlap 387077, overlap 387071 387077 CTCGCCCTTAAAACA CAAAGACGAGCCGGAA CGCC TTCCGCCTCGCCTCTG TCGTGCTACCTCGAA TERM 393 387104 - 387077 - R 95 -12 -4.45168 | opp_overlap 387077, overlap 387073 387071 CCCTTAAAACACAAA GACGAGCCGGAA CGCC TTCCGCCTCGCC TCTGTCGTGCTACCT manC 388564 - 387134 - | mannose-1-phosphate guanylyltransferase (GDP) TERM 394 388610 - 388591 - R 80 -4.2 -5.09426 | TCCAACTCTAAAAAA TTTCCCGG CGCG CCGGACAA TATAGATATTTCCAA TERM 395 388814 - 388794 - R 100 -10.4 -5.5454 | opp_overlap 388794 CCAAACAAAGAAAAA CCCCGGAA TCATC TCCCGGGG TTTCTTTTTCAAAGT TERM 396 388794 - 388814 + r 95 -8.2 -4.86385 | opp_overlap 388794 CCAAACAAAGAAAAA CCCCGGAA TCATC TCCCGGGG TTTCTTTTTCAAAGT Atu3354 391253 - 388845 - | pyrroloquinoline-quinone-dependent quinate dehydrogenase TERM 397 390330 - 390306 - G 71 -6.4 -4.15453 | gap 1, overlap 390298 GAAGTCAGGGCAAAA CGCGCCCG-TG TCCG CATCAAGCGCG ATGAGTTCCGCATTG TERM 398 392298 - 392258 - g 74 -4 -4.7254 | gap 2, overlap 392260 ATCGTGCAGGAAAAA CTGCTGCTGCCGA--TCGAT GAG ATCGGCCTCGGCCTCAGCAG CAGCGCGCTCACGCT Atu3355 391676 - 392575 + | LysR family transcriptional regulator Atu3356 392736 - 395024 + | malic enzyme Atu3357 395279 - 396118 + | ABC transporter, substrate binding protein (amino acid) TERM 399 396201 - 396225 + F 100 -12.1 -4.64846 | opp_overlap 396204 TGCGCCAACCCTCAA GAACGGCCGGT TTC GCCTGCCGTTC TTTTCTGCTTTATAA Atu3358 396414 - 397046 + | ABC transporter, membrane spanning protein (amino acid) Atu3359 397043 - 397825 + | ABC transporter, membrane spanning protein (amino acid) TERM 400 398549 - 398527 - g 75 -8.4 -4.18018 | overlap 398512 398499 398528 CGTCTTTACCGAAAA CGGCCTGATC GTC GATCAGGGCA CGCCGGAACATATCT Atu3360 397838 - 398653 + | ABC transporter, nucleotide binding/ATPase protein (amino acid) TERM 401 399937 - 399918 - g 78 -4.8 -4.8622 | overlap 399919 399920 GGCGGCAATGAAAAA TTCGCCGG GATT CCGGCGCT GGTGCGGAGCATGAA Atu3361 398658 - 400004 + | hypothetical protein Atu3362 400031 - 401341 + | monooxygenase TERM 402 401414 - 401399 - T 93 -11.8 -4.25104 | opp_overlap 401399 401395 TCCTGTTCATGAAAA GCGGCC CCGG GGCCGC TTCCTTTATGCGGCC TERM 403 401399 - 401414 + T 81 -11.8 -3.6053 | opp_overlap 401399, overlap 401395 TCCTGTTCATGAAAA GCGGCC CCGG GGCCGC TTCCTTTATGCGGCC Atu3363 403156 - 401420 - | sensory methylation accepting chemotaxis protein TERM 404 401590 - 401609 + g 71 -5.7 -4.28994 | gap 1 TGCTGATGACCGTGG TGCGGGCG CTCAT CGCC-GCA TTTTCCTGCGTCATC TERM 405 403706 - 403675 - g 83 -2.1 -5.1861 | gap 1 GGCATCATGAAAAAA GCGCCCCGCTGGCT GTTCG ATCC-GCTGGGCCC GCTCAGCGTGCCGCC TERM 406 403972 - 403957 - g 85 -5.4 -5.07486 | overlap 403963 GACTGGGAAGAAAAA CAAAGC GCCG GCTTCG CCTTTGAGCGTGTCG Atu3364 403471 - 404724 + | D-amino acid dehydrogenase Atu3365 405300 - 404740 - | hypothetical protein Atu8094 405588 - 405343 - | hypothetical protein TERM 407 405802 - 405787 - H 70 -6.8 -4.12942 | gap 1, opp_overlap 405786 405799 405800 GCAAACGGTTGAAAA GCG-GGC TTC GCCGCGC CGTTTCATGGCGGTT TERM 408 405799 - 405815 + H 71 -4.3 -4.5528 | opp_overlap 405787, overlap 405786 405800 AAAGCGGGCTTCGCC GCGCCGT TTC ATGGCGG TTTTGGTTGCTTTTC Atu3366 405983 - 406522 + | tripartite ATP-independent periplasmic transporter DctQ Atu3367 406555 - 408024 + | TRAP dicarboxylate transporter, DctM subunit TERM 409 408069 - 408098 + T 95 -10.7 -4.65032 | opp_overlap 408076, overlap 408070 CTTATAGTTGCGGAG TGGAAGACAGGGT TCCA GCCCTGCCTTCCG TTTGTTTATCGTTTG TERM 410 408070 - 408097 + T 80 -12 -3.37393 | opp_overlap 408076, overlap 408069 TTATAGTTGCGGAGT GGAAGACAGGGT TCCA GCCCTGCCTTCC GTTTGTTTATCGTTT TERM 411 408122 - 408149 + T 90 -8.4 -4.77036 | opp_overlap 408121 408122 TCGTTTGAAATGAAG CCGGACAGTC ACTGACCA GCCTGTCCGG TTTTTCCTAATGACA TERM 412 408224 - 408262 + T 78 -13.2 -2.62396 | gap 2, opp_overlap 408217 GAGAGTAAGGCCTTT GCC-GAG-GTCGGCGTGG CCAAT CCTCGCCGACACTCCGGC TGGTATCGGAACCTA TERM 413 408386 - 408351 - T 100 -19.2 -3.53722 | opp_overlap 408355 408357, overlap 408357 GGCATAGGCACACAA CAAAAACCCCGGAGAC CGAA GTCTCCGAGGTCTTTG CCCGGTCCGCCGCCG TERM 414 408355 - 408382 + T 71 -9.8 -3.55444 | opp_overlap 408351 408357, overlap 408357 TAGGCACACAACAAA AACCCCGGAGAC CGAA GTCTCCGAGGTC TTTGCCCGGTCCGCC TERM 415 408380 - 408357 - T 100 -14.6 -5.24796 | opp_overlap 408355 408357, overlap 408351 GGCACACAACAAAAA CCCCGGAGAC CGAA GTCTCCGAGG TCTTTGCCCGGTCCG TERM 416 408357 - 408380 + T 80 -12.4 -3.35597 | opp_overlap 408357 408351, overlap 408355 GGCACACAACAAAAA CCCCGGAGAC CGAA GTCTCCGAGG TCTTTGCCCGGTCCG Atu3368 409510 - 408413 - | periplasmic mannitol-binding protein Atu3369 409815 - 410570 + | hypothetical protein TERM 417 410632 - 410608 - T 100 -16.5 -5.24129 | overlap 410625 TTCGCCCATAAAAAA GGGGCAAGCTC TGA AAGCTTGCCCC AAGTCCGGGAGGAGG Atu3370 411681 - 410653 - | ABC transporter, membrane spanning protein (sugar) Atu3371 413255 - 411714 - | ABC transporter, nucleotide binding/ATPase protein (sugar) TERM 418 413478 - 413437 - R 78 -12.4 -3.28924 | gap 2, opp_overlap 413429, overlap 413389 CAGCGCCGTCGAGAA CCGGCATC--CGCCCGTCAT ATAA AAAACGGGCGTAGATGCCGG AACGCGGACGTTAGT Atu3372 414418 - 413489 - | ABC transporter, substrate binding protein (sugar) TERM 419 414827 - 414796 - R 100 -16.6 -3.33162 | opp_overlap 414793 414823 TATTCCACGCCAGAA TCCGTCAGCCCTCT CGTC AGAGGGCCGCCGGA ACATCCTGTCTCTTC Atu3374 416378 - 414936 - | amidohydrolase TERM 420 416497 - 416465 - R 100 -18.4 -3.68351 | gap 1, opp_overlap 416456 416455, overlap 416466 GGTCTATGATGGAAA TGCCCGCGCCGG-GG TCCG CCTCCGGCGCGGGCG CTAGTGGATCAGTTG TERM 421 416496 - 416466 - R 100 -21.9 -2.80796 | gap 1, opp_overlap 416456 416455, overlap 416465 GTCTATGATGGAAAT GCCCGCGCCGG-GG TCCG CCTCCGGCGCGGGC GCTAGTGGATCAGTT Atu3375 418083 - 416506 - | ABC transporter, substrate binding protein (peptide) Atu3376 418928 - 418080 - | beta-lactamase Atu3377 420570 - 418936 - | ABC transporter, nucleotide binding/ATPase protein (peptide) Atu3378 421385 - 420567 - | ABC transporter, membrane spanning protein (oligopeptide) dppB 422326 - 421382 - | ABC transporter, membrane spanning protein (peptide) Atu3381 423412 - 422507 - | LysR family transcriptional regulator prsE2 424934 - 423621 - | HlyD family secretion protein TERM 422 423885 - 423903 + g 84 -11 -4.08216 | CCGCTGGTTGAAGGC GGTCATGC GCA GCATGGCC TTTTGCCCCACCTGC prsD 426768 - 424921 - | rhizobicin secretion TERM 423 426741 - 426717 - G 100 -17.2 -3.9243 | opp_overlap 426705 426717 TAAGGGGCGAAACAA CCGCCGCAGT GAGGG ACTGCGGCGG TGTCTGCTGGTGGTT TERM 424 426717 - 426741 + g 85 -17.2 -2.9696 | opp_overlap 426717, overlap 426705 TAAGGGGCGAAACAA CCGCCGCAGT GAGGG ACTGCGGCGG TGTCTGCTGGTGGTT Atu3384 427538 - 426783 - | hypothetical protein hasR 430413 - 427642 - | heme receptor TERM 425 429573 - 429584 + g 78 -2.2 -5.09426 | overlap 429561 CGGCATTGCCGGAAG TGGC ACTG GTCA TTTTTTCGACTTCGA TERM 426 430355 - 430373 + g 85 -5.9 -5.0538 | opp_overlap 430350 GCCAGCAACACGGCC CTGCGGG TCTGC CCTGCGG TTTTTTCCCCTGAAC TERM 427 430480 - 430491 + r 85 -2.2 -5.4477 | TCAACAAAAAGACGA TTGC CACG GCGA TTTTTTTCAGGCTTT Atu3386 431558 - 430563 - | two component sensor kinase TERM 428 431264 - 431235 - G 74 -12.1 -3.21036 | gap 1, opp_overlap 431236, overlap 431220 431231 431237 CAGCACCACAAGACA GAGCGATGCCGCCG CCA CGGCGGCACC-CGC ATAATGTCTGACGGA TERM 429 431264 - 431237 - G 85 -15.6 -3.16203 | gap 1, opp_overlap 431236, overlap 431220 431235 431231 GCACCACAAGACAGA GC-GATGCCGCCG CCA CGGCGGCACCCGC ATAATGTCTGACGGA pfrI 432170 - 431670 - | sigma factor TERM 430 432348 - 432373 + r 73 -10.3 -3.32498 | overlap 432350 CGTGCCGGCGACGGG AACCCGGCCAC AGAT GCGGCCGGGTC TTGCTCTCTCAGATA TERM 431 432350 - 432371 + r 83 -12.9 -3.22777 | overlap 432348 TGCCGGCGACGGGAA CCCGGCCAC AGAT GCGGCCGGG TCTTGCTCTCTCAGA fecE 433134 - 432382 - | ABC transporter, nucleotide binding/ATPase protein (iron) TERM 432 433010 - 433049 + g 100 -17.8 -3.56643 | opp_overlap 433000, overlap 433011 AAAAGCGTCGACTTG CCGGCGGCGTTGGGGCCG ATCA CGGCCGTAACGCTGCCGC TTTCCAGCGTATCGA TERM 433 433011 - 433048 + g 100 -21.3 -2.73771 | opp_overlap 433000, overlap 433010 AAAGCGTCGACTTGC CGGCGGCGTTGGGGCCG ATCA CGGCCGTAACGCTGCCG CTTTCCAGCGTATCG Atu3389 434195 - 433128 - | ABC transporter, membrane spanning protein (iron) TERM 434 433837 - 433802 - G 72 -11 -3.34398 | overlap 433800 433820 CCGCCCCCGGAAAGA TCGCCACGCCGCCGAC AAGC GCCAGCGCCGCGCCGA AGCTTGCAGCCGCCG Atu3390 435331 - 434192 - | ABC transporter, substrate binding protein (iron) TERM 435 434844 - 434805 - G 76 -15 -2.50443 | opp_overlap 434805 434839, overlap 434804 CGATAGGCGATGAAT TCCTTGGCGCGCTCTTCG GCGC CGAAGAGCTTGCCGAGGA TTTCGATGGAAGCTT TERM 436 434805 - 434844 + g 100 -19.4 -3.65199 | opp_overlap 434805 434804, overlap 434839 CGATAGGCGATGAAT TCCTTGGCGCGCTCTTCG GCGC CGAAGAGCTTGCCGAGGA TTTCGATGGAAGCTT TERM 437 435391 - 435362 - R 100 -15.1 -4.87133 | opp_overlap 435369, overlap 435363 AGTTCCTAAACAAAA CGATGAAGCCGCA GGGC TGCGGCTTCATCC ATCGATCGGACGGCG TERM 438 435390 - 435363 - R 100 -18.6 -3.51557 | opp_overlap 435369, overlap 435362 GTTCCTAAACAAAAC GATGAAGCCGCA GGGC TGCGGCTTCATC CATCGATCGGACGGC TERM 439 435369 - 435384 + r 71 -10.4 -3.18912 | opp_overlap 435363 435362 AAACAAAACGATGAA GCCGCA GGGC TGCGGC TTCATCCATCGATCG Atu3391 436561 - 435428 - | ABC transporter, substrate binding protein (iron) TERM 440 437427 - 437412 - g 81 -7.6 -4.62069 | CGCCCAGGCGAAAAA CTTCAG CCTG CTGAAG GGCATCCTGCGCGGG Atu3392 436675 - 437499 + | methyltransferase Atu3393 438116 - 437676 - | pseudoazurin fecE 438913 - 438113 - | ABC transporter, nucleotide binding/ATPase protein (iron) Atu3395 439863 - 438910 - | ABC transporter, membrane spanning protein (iron (III)) TERM 441 439877 - 439833 - G 100 -17.1 -3.55866 | overlap 439829 439875 CGACATCGAAAGGAA TGGCGGTCTCGCCGATGGCCG CCC CGGCCATCAGCGCGACAAGCA GCAGGGCGAGTGCTG TERM 442 439913 - 439878 - R 83 -14.8 -2.83271 | gap 1, overlap 439829 439875 TCAGCGCGACAAGCA GCAGGGCGAGTGCTG CAAATGC CAGC-CCCGCCCTGC CAAGATGGGTGGAGA Atu3396 440966 - 439935 - | ABC transporter, substrate binding protein (iron) TERM 443 440398 - 440425 + g 71 -8.4 -4.08767 | opp_overlap 440396 AGGTCGGCAACGACC TCTTCACCGCGC CCCT GCACGTTGAAGA TTTTGGCGAGGTCGC Atu3397 442285 - 441410 - | hypothetical protein TERM 444 442024 - 441997 - G 71 -7.6 -4.09739 | GGAACTTCGCCAAAA GCCGCCGCACCA GCCA TGGCGCAACGCC CTGCCCCTGCAGGCG argE 442488 - 443612 + | acetylornithine deacetylase Atu3399 443635 - 444558 + | 2-hydroxyacid dehydrogenase TERM 445 444749 - 444726 - g 76 -6 -4.62336 | opp_overlap 444714 444747 ACGGCACCGTAAAAA CGGGCATT TTTGAAGC AACGCCCG GTGCAAACCGCTCTA Atu3400 444587 - 444943 + | hypothetical protein TERM 446 445036 - 444994 - f 83 -9.9 -4.07568 | overlap 444995 TTTGTGTCGGGAAAA TGCCGGCGGACACACGC-ACC GAA GATTGCAC-TGTCCGCCGGCG GCAAAACAGGATTTT TERM 447 445035 - 444995 - f 84 -13.4 -3.04398 | overlap 444994 TTGTGTCGGGAAAAT GCCGGCGGACACACGC-ACC GAA GATTGCAC-TGTCCGCCGGC GGCAAAACAGGATTT TERM 448 445754 - 445735 - g 74 -12.1 -3.15579 | TGAACTGGCCATCAA GGCCGGC CTGCCC GCCGGCC TCATCAACGTCGTGC Atu3401 445133 - 446596 + | aldehyde dehydrogenase TERM 449 447349 - 447376 + G 75 -8.3 -4.14392 | overlap 447350 ATATTCTGACCGATC TCGGCGCCGCC ATTCAG GGCGGCCTCGG TTTTGCCGCTTCCGC Atu3402 446610 - 447653 + | 3-isopropylmalate dehydrogenase attK2 447669 - 449126 + | succinate semialdehyde dehydrogenase TERM 450 449150 - 449172 + T 100 -13.4 -4.82901 | opp_overlap 449153, overlap 449153 TCTTTCTCCCCGCCT AAAGGGCCGC TCT GCGGCCCTTC TTTTTGTGCCGACGC TERM 451 449169 - 449153 - T 95 -15.1 -3.53012 | opp_overlap 449150 449153 TTCTCCCCGCCTAAA GGGCCGC TCT GCGGCCC TTCTTTTTGTGCCGA TERM 452 449153 - 449169 + T 100 -15.1 -4.52873 | opp_overlap 449153, overlap 449150 TTCTCCCCGCCTAAA GGGCCGC TCT GCGGCCC TTCTTTTTGTGCCGA TERM 453 449209 - 449196 - T 100 -9.5 -5.10461 | opp_overlap 449195 449196 CCGACGCAACAAAAA CGGCC CGGA GGCCG CTTTGAATTACTGAT ordL 450491 - 449217 - | oxidoreductase TERM 454 449303 - 449284 - G 80 -10 -4.07885 | gap 1 CAGGGCTTGCCAAAA TGGCCCGGC ACT GCCGG-CCA GTCCAGCCCCTTCAG TERM 455 450372 - 450343 - G 81 -15.7 -2.87963 | overlap 450335 TCCAGAACGACGACA CGCGCACCGGCTT TCGC AAGCTGGCGCGCG GCACCGAGACCCGTG hadL 451175 - 450507 - | haloalkanoic acid dehalogenase Atu3406 451499 - 452335 + | hypothetical protein TERM 456 453526 - 453512 - g 72 -2.7 -4.85396 | overlap 453487 ACAAGGACAAGAAAA CGCCC TTGCC GGCCG CAGCCGCCCCCGCGC Atu3407 452350 - 453723 + | hypothetical protein TERM 457 453752 - 453732 - f 93 -4.5 -5.60993 | overlap 453733 453734 GGCCTGAGAAAAAAA CGGGCGGCG TTG CGGCACCCT CTCGAAATGTCGCAA TERM 458 453751 - 453733 - f 74 -8 -3.95873 | overlap 453732 453734 GCCTGAGAAAAAAAC GGGCGGCG TTG CGGCACCC TCTCGAAATGTCGCA TERM 459 454440 - 454429 - g 71 -7.2 -4.18494 | opp_overlap 454428 454429, overlap 454416 TACCGGCACGGAAAA GCCG GACC CGGC CTTCTTCGAAAAGGT hadL 453848 - 454693 + | 2-haloalkanoic acid dehalogenase Atu3409 454787 - 456397 + | ABC transporter, substrate binding protein (oligopeptide) Atu3410 456490 - 457440 + | ABC transporter, membrane spanning protein Atu3411 457440 - 458291 + | ABC transporter, membrane spanning protein TERM 460 459446 - 459460 + G 82 -9.2 -4.386 | ATCGAGGATATTCTC GGCCGG CCG CTGGCC TTTTATCACAGCTTG Atu3412 458291 - 459946 + | ABC transporter, nucleotide binding/ATPase protein lrp 460609 - 460133 - | AsnC family transcriptional regulator TERM 461 460615 - 460625 + H 78 -2.4 -5.27769 | CGAGTTTCATCACGT GCGG GAA CCCC TTTTTGATTTTTTCT TERM 462 461099 - 461142 + G 75 -8 -4.18197 | opp_overlap 461095, overlap 461101 461108 TCTGGGAAGAATTCG CTGCCGTCACCGGCGAGAAC ACCG GTTTTCGTCGTTGCGGGCTG TTTTACCTGAGCGAT TERM 463 461108 - 461123 + G 71 -6 -4.3534 | opp_overlap 461095, overlap 461101 461099 AATTCGCTGCCGTCA CCGGCG AGAA CACCGG TTTTCGTCGTTGCGG TERM 464 462006 - 462032 + G 73 -10.1 -3.57792 | gap 1, overlap 462006 GTTGCCGGGTTTCAT CC-TGGCCGCCG GCTT CAGCGGCCACGG TTTCGGCATCGGTCC Atu3414 460840 - 462165 + | putative AgaE TERM 465 462230 - 462199 - T 100 -16 -4.72497 | gap 1, opp_overlap 462202 462218 462219 CACTGATGAATAAAA CAACACCCGCACGGC ATG ACC-TGCGGGTGTTG TCGTCCGCCGCATTT TERM 466 462202 - 462227 + T 75 -11.2 -3.40403 | gap 1, opp_overlap 462199, overlap 462218 462219 TGATGAATAAAACAA CACCCGCACGG CATGA CC-TGCGGGTG TTGTCGTCCGCCGCA Atu3415 463191 - 462256 - | ABC transporter, substrate binding protein TERM 467 462517 - 462498 - G 79 -9.2 -4.25104 | GCGCCGCGATGAAAA CCAGCTGC GCAT GCGGCTGG ACGATGACATCCGCC TERM 468 463253 - 463224 - R 95 -14.3 -3.72893 | GATTGCGGGACGAAA GTAGCGCGGGC GGGAGGAT GCCCGCGCCAC CGGCTGAGTGATGTC Atu3416 464269 - 463331 - | ABC transporter, substrate binding protein Atu3417 466106 - 464295 - | ABC transporter, nucleotide binding/ATPase protein TERM 469 466001 - 465968 - G 76 -7.3 -4.49337 | gap 1, overlap 465956 465954 465953 CGAGAACGGAGAAAA CCGTGCCCACCGTCCG CAG CGGATACCGGGC-CGG GACGATGCGGAAATG Atu3418 466665 - 466120 - | acetyltransferase Atu3419 467876 - 466689 - | hippurate hydrolase TERM 470 467618 - 467636 + g 76 -5.8 -4.59773 | overlap 467615 GCAGCGCATCGATAT CGGCGCGG ATG CCGAGACG TTTTTCGCCGTGGCC TERM 471 467834 - 467859 + g 75 -13.3 -2.87881 | gap 1 CAAGGATCCCCCGTT CGGCGT-CGTCC TGC GGACGCGCGCCG TCTATGCGGACATTC TERM 472 467956 - 467921 - R 71 -9.6 -3.53012 | gap 1, opp_overlap 467921, overlap 467922 CCCCGCGTCTTGAAA TCTGTGCCGGGCGGCGA TCA CCACCGCCCGGC-CGCA ACCTTATGCGATGGC TERM 473 467954 - 467922 - R 72 -12 -2.71712 | gap 2, opp_overlap 467921, overlap 467921 CCCGCGTCTTGAAAT CTGTGCCGGGCGGCGA TCA CCACCGCCCGGC-C-G CAACCTTATGCGATG Atu3420 469300 - 467960 - | monooxygenase TERM 474 468740 - 468726 - G 75 -8.5 -4.16842 | TCCACCTGGAAGAAA CGGCC CTTGT GGCCG AGCGTGTGGAGTTTG TERM 475 469274 - 469284 + g 85 -2.4 -5.3104 | overlap 469273 469276 ACCCTGAAGCATGAT GCCG AAA CGGA TTTTCTTTTTCGTCA Atu3421 470325 - 469324 - | hypothetical protein TERM 476 469846 - 469823 - G 100 -13.8 -4.4767 | opp_overlap 469838 GCACCGAGCAGAAAA CGTTCCGCCG CAAT CGGCGGCACG GGTGTCGCCTGTAGT TERM 477 470587 - 470607 + H 74 -8.3 -3.96506 | opp_overlap 470583 TAGGAACATTACGAT CCGGCAT TGTGAAT ATGCCGG TTCTCTTTTCGGATC TERM 478 471068 - 471038 - g 74 -11 -3.54459 | GCAATTCGTCGCAAA GGATGGGCAGGACC AGC GGTCCATCCCAGCC GGCGAATAGGATTTC Atu3423 470628 - 471077 + | hypothetical protein Atu3424 472049 - 471105 - | hypothetical protein Atu3425 472646 - 472101 - | hypothetical protein Atu3426 473970 - 472801 - | putative sulfonate monooxygenase TERM 479 473464 - 473436 - G 77 -7.9 -4.41616 | opp_overlap 473454, overlap 473422 AGCCGCCGAAATAAA GCGGCGGGCGCGG TTC CTGCACCGGCGGC AGGCCGAGCCTGGCA Atu3427 474100 - 474417 + | hypothetical protein Atu3428 475087 - 474470 - | hypothetical protein Atu3429 475289 - 475477 + | hypothetical protein Atu3430 475474 - 476544 + | alkanesulfonate monooxygenase TERM 480 476558 - 476589 + T 100 -20.2 -2.52896 | opp_overlap 476546 476580 GAAGCGGGGACGATG CCGGGCGGTCTTGT CGAA GCAAGGCCGCCCGG TGCCTTCGCCAATCA acd 477780 - 476602 - | acyl-CoA dehydrogenase TERM 481 477650 - 477665 + g 74 -6 -4.4891 | opp_overlap 477644 GCTTCGAAATTGCCG GCGGCG AATT CCCCGC TTTTGTCGTGGTCAG Atu3432 478808 - 477777 - | desulfurizing enzyme TERM 482 478865 - 478836 - R 78 -6.3 -4.82855 | overlap 478838 GATGAAAGGGAAAAA TACCGGCTCCC GCAAAAAG GGGAGCCGGGT CTGGCGAGACAATCA TERM 483 478863 - 478838 - R 100 -13.3 -4.02139 | overlap 478836 TGAAAGGGAAAAATA CCGGCTCCC GCAAAAAG GGGAGCCGG GTCTGGCGAGACAAT Atu3433 480485 - 478878 - | ABC transporter, substrate binding protein (oligopeptide) TERM 484 481128 - 481142 + G 84 -5.6 -5.00616 | TCGGCGTGTTCCTCG GCTCCA TCA TGGCGC TTTTTTCCGGCAAGC Atu3434 480755 - 481744 + | ABC transporter, membrane spanning protein (oligopeptide) Atu3435 481741 - 482736 + | ABC transporter, membrane spanning protein (oligopeptide) Atu3436 482733 - 483731 + | ABC transporter, nucleotide binding/ATPase protein (oligopeptide) TERM 485 484164 - 484192 + G 76 -12.3 -3.28712 | overlap 484189 TTCCGGCGGCCAGCG CCAGCGCATCGGC ATT GCCCGCGCGCTGG TTCTGGAACCGGAAC Atu3437 483709 - 484644 + | ABC transporter, nucleotide binding/ATPase protein (oligopeptide) Atu3438 484663 - 485718 + | putative oxidoreductase TERM 486 485757 - 485732 - f 100 -16.1 -4.88736 | GATTACTCACAAAAA GCCTGCGGCGC GACC GTGCCGCAGGC CCTCACATCTGCTCA acd 485786 - 487024 + | acyl-CoA dehydrogenase TERM 487 487276 - 487302 + G 73 -8.7 -3.86822 | gap 1, overlap 487277 GCCAGCGCGGCGAGC TCGTGCTGACCG ACGC CGG-CAGCACGC TTTATCCCGGCCTTG TERM 488 487277 - 487301 + G 70 -12.2 -2.91772 | gap 1, overlap 487276 CCAGCGCGGCGAGCT CGTGCTGACCG ACGC CGG-CAGCACG CTTTATCCCGGCCTT Atu3440 487044 - 488015 + | LysR family transcriptional regulator Atu3441 489384 - 488032 - | nitrilotriacetate monooxygenase Atu3442 491035 - 489440 - | ABC transporter, substrate binding protein (oligopeptide) TERM 489 491212 - 491198 - g 72 -2.1 -4.85782 | gap 1, opp_overlap 491198 GCCGGCAAAAACAAA CAG-CG GCAG CGACTG GTTTTCCTCGCCCGC Atu3443 491078 - 491527 + | hypothetical protein TERM 490 491667 - 491682 + T 76 -10.4 -3.63655 | opp_overlap 491667, overlap 491663 TCCGCGATAAAAAAA CCGGCA AAAC TGCCGG TTCATTTGGTTCTCG TERM 491 491682 - 491667 - T 100 -10.4 -5.60993 | opp_overlap 491667 491663 TCCGCGATAAAAAAA CCGGCA AAAC TGCCGG TTCATTTGGTTCTCG Atu3444 493381 - 491750 - | ABC transporter, substrate binding protein (oligopeptide) Atu3445 494573 - 493374 - | hippurate hydrolase TERM 492 493515 - 493503 - G 76 -5.5 -4.60041 | opp_overlap 493503 493504, overlap 493504 ACCGAGGGTGAAAAA CGCAC CGG GTGCA TGTTTCAGGAGATCG Atu3446 495836 - 494667 - | monooxygenase Atu3447 496720 - 495827 - | hypothetical protein Atu3448 497780 - 496728 - | putative dibenzothiophene desulfurization enzyme B TERM 493 497981 - 498005 + H 90 -6.4 -5.18726 | overlap 497983 498001 TTTGATCGCATCCTC CATTCAGCTG CACGT CGGCTGAAAG TTTTTCTTCTCCGAA TERM 494 498251 - 498290 + G 82 -9.3 -4.35116 | gap 2, opp_overlap 498263 498274 ATCGGCTATTACCGG CGGCTGACGGAACTGGCCC ACAA GGGCCGGTTC-GAC-GCTG TTTTCCTGTCCGATC TERM 495 498391 - 498403 + G 71 -6.9 -4.1552 | GCTTGCAGCACAGGT GCCGG ATA TCGGC TTTGTTGCGACGGTG TERM 496 498625 - 498613 - g 70 -4.8 -4.57569 | CGATGTGGCGAAAAA GCTC TGGTC GAGC TGGGATCCGCGCCGG TERM 497 498750 - 498725 - g 73 -10.3 -3.60296 | TATTTCCAGGTGAAA GGCCCGCTCAA CGTT CCGCGCGGGCC GCAGGGACATCCCGT TERM 498 498891 - 498878 - g 77 -3.7 -5.00616 | opp_overlap 498877, overlap 498880 GCCTTCGGCAAAAAA GTGCG TGAC CGCGC CGTCTCTTTCGGCCG TERM 499 499195 - 499171 - g 75 -7.7 -4.2828 | GCTGACCCATGAAAA GCTCACCGCCC GCG AGGCCGTGCGC CGTTCGGAGGGGCAC Atu3450 498128 - 499435 + | nitrilotriacetate monooxygenase TERM 500 499466 - 499444 - T 74 -10.6 -3.55604 | overlap 499442 CGATTGAACGAAAGA TGTGGCGC AATTAAA GCGCCACA GGTCCATCTCGCGCC Atu3451 500550 - 499522 - | monooxygenase TERM 501 499745 - 499731 - G 71 -7 -4.2828 | opp_overlap 499738 TGTCAGGCAGGAAAA GCGTGC GGC GCGCGC CATGTGGCGCATGCG Atu3453 500975 - 502123 + | isomerase/lactonizing enzyme Atu3454 502130 - 502759 + | arylesterase TERM 502 502876 - 502906 + G 74 -11.8 -3.53012 | overlap 502877 CGCAGCGCTTGGCGC CCTGCTGATCGGCG CCA TGCCGCTCAGCAGC TTTGCCGAAACGCCG TERM 503 502877 - 502905 + G 77 -15.3 -2.71712 | overlap 502876 GCAGCGCTTGGCGCC CTGCTGATCGGCG CCA TGCCGCTCAGCAG CTTTGCCGAAACGCC TERM 504 503088 - 503053 - g 72 -12.6 -3.01712 | GCTTTCCCCTGAAGA TCGCAGCGTTCAGCCA CGCC TTGCCGAACGCTGGGA AATTGCCGAAGACCG Atu3455 502841 - 504439 + | ABC transporter, substrate binding protein (oligopeptide) TERM 505 504468 - 504488 + T 100 -11.1 -5.4505 | opp_overlap 504468 CTGCGAATAAGATAA GGCGCGG CTAACCC CCGCGCC TTTTTTGTTGGCGAC TERM 506 504488 - 504468 - T 82 -11.1 -3.83318 | opp_overlap 504468 CTGCGAATAAGATAA GGCGCGG CTAACCC CCGCGCC TTTTTTGTTGGCGAC TERM 507 504596 - 504575 - T 100 -13 -5.82316 | ACCAGTCAAAAAAAA TGCCCGGC AGGGAG GCCGGGCA AGGAAGGAGGATTTT Atu3456 505415 - 504657 - | ABC transporter, nucleotide binding/ATPase protein Atu3457 506251 - 505415 - | ABC transporter, nucleotide binding/ATPase protein TERM 508 505827 - 505839 + g 76 -9.1 -4.08767 | TGCTCGTAGACGCGC TCCGC ATC GCGGA TTTTCACCGCATCGA Atu3458 507143 - 506256 - | ABC transporter, membrane spanning protein Atu3459 508165 - 507143 - | ABC transporter, membrane spanning protein Atu3460 508469 - 509101 + | RhtB family transporter Atu3461 509857 - 509129 - | GntR family transcriptional regulator Atu3462 510935 - 509952 - | AraC family transcriptional regulator TERM 509 510211 - 510235 + g 86 -17.9 -2.70932 | CGCTCCTCCAGCCCG GCGTGACCGGC CAT GTCGGTCACGC TCGTTGCCCGCCCGG cpoF 511064 - 511891 + | non-heme chloroperoxidase TERM 510 512339 - 512368 + G 70 -12.9 -2.87132 | gap 1, opp_overlap 512325 ACATGACTTCGGTCA CGGCGCTG-ATGCC GGC GGCATTCACCGCCG TCTATCCGGCCACAA Atu3464 511918 - 512709 + | dehydrogenase TERM 511 512837 - 512852 + G 77 -3.2 -4.91109 | overlap 512836 512835 GTGGGGCGGTGGATG CCGC GCATGACG GCGG TTTTTCTCGTCACCA Atu8032 512723 - 513208 + | hypothetical protein TERM 512 513243 - 513276 + F 100 -15.3 -4.07687 | opp_overlap 513243 513241 GGCTTCCGGAGAAGA CGCCCTGTGCCCGAG TAAT TTCGGGCACAGCGTG TTTTGCGCGCCAAAT TERM 513 513276 - 513243 - f 78 -12.4 -3.21276 | opp_overlap 513243, overlap 513241 GGCTTCCGGAGAAGA CGCCCTGTGCCCGA GTAATT TCGGGCACAGCGTG TTTTGCGCGCCAAAT TERM 514 513637 - 513625 - g 89 -4.7 -5.17353 | opp_overlap 513632 513635, overlap 513626 513627 ATACGCAGGAAAAAA GCGCC GCC GGTGC CGCCGGCATGGATTA TERM 515 514031 - 514017 - g 91 -7.8 -4.72986 | GATTTCGACGAAAAA TCCGGC GCG ACCGGA ACGATGAATGCTGAC Atu3465 513471 - 514766 + | metallo-beta-lactamase superfamily protein TERM 516 514846 - 514829 - g 73 -4.8 -4.65895 | gap 1 CCCGCCATGGAAAAA CGCG-CC ACTGA GGTCGCG ATACTTTTAAAGACG TERM 517 514866 - 514912 + G 75 -8.1 -4.18018 | gap 3, opp_overlap 514861 TTTTAAAGACGCTGG CTCACCCTGC-CCGGCTGATGC TCGCCT GCA-C-GCTGGCGCAGGGAGAG TTTTCCGTCGGCGAG TERM 518 515049 - 515028 - g 70 -5.1 -4.50159 | GTGAAGCCAAACAAA TCTTCTACC GGCT GGCGGAAGA CAAGGCGGCGCGGCT Atu3466 514760 - 515113 + | ArsR family transcriptional regulator TERM 519 515160 - 515172 + G 77 -7.7 -4.32857 | overlap 515147 GCTGCTTGGTCTCGC CAGCA TTC TGCTG TTTGTCTTTAACGGC Atu3467 515143 - 515517 + | hypothetical protein TERM 520 515610 - 515620 + G 72 -2.4 -4.75472 | overlap 515584 ATGATCGATCCGGCA CGCG TTT CGGG TTTTCTTGATGTAGC Atu3468 515514 - 515951 + | hypothetical protein TERM 521 516021 - 515981 - T 100 -14.1 -4.28994 | gap 2, opp_overlap 515981, overlap 515984 515986 515988 CATGATGGACGAAAA GCAGATAGTCGCGCGGGCG AAAAA CACCCGCGCGACCA-C-GC TCAATTACAGATCGA TERM 522 516019 - 515984 - T 93 -15.5 -3.14218 | gap 1, opp_overlap 515981, overlap 515981 515986 515988 GATGGACGAAAAGCA GATAGTCGCGCGGGCG AAAAA CACCCGCGCGACCA-C GCTCAATTACAGATC TERM 523 516018 - 515986 - T 100 -19.2 -3.12521 | opp_overlap 515981, overlap 515984 515981 515988 TGGACGAAAAGCAGA TAGTCGCGCGGGCG AAAAA CACCCGCGCGACCA CGCTCAATTACAGAT TERM 524 516016 - 515988 - T 100 -19.6 -3.11604 | opp_overlap 515981, overlap 515986 515984 515981 GACGAAAAGCAGATA GTCGCGCGGGCG AAAAA CACCCGCGCGAC CACGCTCAATTACAG pgm 517543 - 516026 - | phosphoglyceromutase TERM 525 516770 - 516729 - GT 86 -10.9 -4.07568 | gap 1, opp_overlap 516738 TTTTCGCGCGCAAAA CCGTCGAAATCATCCGCGCC GAT GGCGAGCAGGATTTC-ACGG GCACGGTCAGCGCGG TERM 526 517469 - 517435 - GT 70 -6.5 -4.08767 | gap 2, opp_overlap 517434 517455 517464, overlap 517465 GGCAGGTGGCGAAAA GCCGGTCCATGGTCG GCGTATT CG-CCA-GAACCGGC GCATTGCTGGATGTG Atu3470 517710 - 517516 - | hypothetical protein bkdB 519182 - 517905 - | branched-chain alpha-keto acid dehydrogenase subunit E2 bkdA2 520198 - 519185 - | 2-oxoisovalerate dehydrogenase beta subunit TERM 527 519849 - 519832 - G 79 -7.7 -4.56597 | gap 1 TCTGCCCGCCAAAAA TGCCG-CC GCC GGTCGGCA TGCGAAGAACGATCG bkdA1 521440 - 520202 - | 2-oxoisovalerate dehydrogenase alpha subunit TERM 528 520260 - 520285 + g 84 -4 -5.17576 | overlap 520281 ATCTCGGCGTAAACG CCTTCGAAAA TATCCT TTTTCGGCGG TTTTTTGCCTTCGTG TERM 529 521085 - 521068 - G 74 -11.3 -3.53012 | TGTCGCCTTTGGAAA GCGCCTT GCGG AAGGCGC AACTGACCGCCTCCT mmgC 522612 - 521485 - | acyl-CoA dehydrogenase TERM 530 522130 - 522117 - G 78 -6.7 -4.62069 | opp_overlap 522117 CTGTGACGGCAAAAA CGATG ATGA CATCG CCGTTCTTGCCCGAT Atu3475 523862 - 522624 - | acetyl-CoA C-acetyltransferase TERM 531 522884 - 522894 + g 100 -8.2 -5.40072 | GATCGACGTCCTTCG CGGC CCA GCCG TTTTTTTCGAACAGC Atu3476 523971 - 524444 + | AsnC family transcriptional regulator TERM 532 525540 - 525556 + G 72 -10.9 -3.29511 | GGCGACACAGGTGGC GCTGGAT GCG ATCCAGC TTCTCGGCGGCTCCG acd 524524 - 525696 + | acyl-CoA dehydrogenase mccB 525705 - 527306 + | 3-methylcrotonoyl-CoA carboxylase beta subunit TERM 533 527589 - 527614 + G 79 -8.9 -4.2558 | opp_overlap 527578, overlap 527577 527576 527582 AAATGCCGGTTTCGC CGAAGCCTGCG CTTC TGCGGGCCTCG TTTTCATCGGCCCTC TERM 534 528746 - 528729 - g 70 -3.3 -4.59773 | overlap 528730 528741 TCTCAGCCGTAAAAA CGCGAGC ACCA ACCCGCA AGCGCAGGCCGACCC mccA 527314 - 529305 + | 3-methylcrotonyl-CoA carboxylase alpha subunit hmgL 529307 - 530233 + | hydroxymethylglutaryl-CoA lyase Atu3481 530223 - 530999 + | enoyl-CoA hydratase panC 531140 - 532018 + | pantoate--beta-alanine ligase TERM 535 532055 - 532038 - g 78 -2.5 -5.10933 | overlap 532040 CCATGCAAAACAAAA GCGGCTG ACGA CGGCCTC CATCCGGCAGATGAA panB 532015 - 532854 + | 3-methyl-2-oxobutanoate hydroxymethyltransferase Atu3484 534181 - 532889 - | hypothetical protein TERM 536 533651 - 533681 + g 73 -13.2 -2.8085 | overlap 533650 GTCACCCACCCACAC CGTCAGCGCCTTCG AGC CGATGGCGTTGCCG ATTTCGATACATTCA TERM 537 534053 - 534035 - G 75 -3 -4.87291 | overlap 534037 CACGGCAACGAAAAA TTCCGCCA CCT TGGCCGTA ACAGCATCGATGTCG TERM 538 534141 - 534165 + g 71 -5.8 -4.3586 | overlap 534144 GCGCGCTTTTCGTTT TCAGCCG-CGAT CAC ATCGGCGGC-GA TTTTCATCTCGGTCA Atu3485 536328 - 534232 - | short chain dehydrogenase TERM 539 536791 - 536778 - g 82 -9.5 -4.35091 | opp_overlap 536789 AATATCGACAAGAAA CGCGC AATT GCGCG CAAGGCGGTTGATCT TERM 540 537333 - 537316 - g 76 -6.9 -4.56597 | overlap 537319 TGGCGGCGGGAAAAA CAGCCGG TCCG CCGGATG AGGAGAATTCTTCTT Atu3486 536529 - 537359 + | DeoR family transcriptional regulator TERM 541 537748 - 537734 - g 75 -8.5 -4.15044 | CCGGCGCTGAAGAAA GCCGC CCAGC GCGGC ATCAAGGTCATTTCC Atu3487 537407 - 538417 + | ABC transporter, substrate binding protein (sugar) Atu3488 538644 - 540176 + | ABC transporter, nucleotide binding/ATPase protein Atu3489 540191 - 541192 + | ABC transporter, membrane spanning protein TERM 542 541401 - 541389 - g 79 -9.1 -4.19704 | opp_overlap 541389 541390 541398 CAACTTCACCGAAAA GGCGA TCA TCGCC TTTGCCATGGCGCTT TERM 543 541512 - 541546 + G 71 -5.4 -4.37092 | GATGGGGGTCGGCAC GCCTGGCCTCGTCGCC ATC GGCATCGGCACCGGGC TTTTCTGCGGCGCCT Atu3490 541189 - 542199 + | ABC transporter, membrane spanning protein Atu3491 542203 - 542526 + | hypothetical protein TERM 544 543249 - 543283 + G 70 -3.6 -4.69664 | gap 2, opp_overlap 543249, overlap 543225 543249 543270 CACGATTCCAACGCA TCG-C-TCCTGCCGCA TCTAT TGCGCCGGGAGGGCGA TTTTTCCGTCGTCTC TERM 545 543550 - 543510 - g 70 -3.8 -4.65895 | gap 1, opp_overlap 543510 543538 GGGGTTATCGAAAAA GGGATGATGCTGCTG-CCA AGCG TGGTCAGCGGCTCCGGCCC CTTTCCGCAAAGCGC Atu3492 542523 - 543905 + | sugar kinase TERM 546 543918 - 543939 + T 100 -15.9 -3.80625 | opp_overlap 543918 TGATCCGCATAAAAA TGCGGCCGA ACAA TCGGCCGCA TTTCGATTCTGCAGA TERM 547 543939 - 543918 - T 100 -15.9 -4.84359 | opp_overlap 543918 TGATCCGCATAAAAA TGCGGCCGA ACAA TCGGCCGCA TTTCGATTCTGCAGA Atu3493 544794 - 543958 - | non-heme haloperoxidase Atu3494 545807 - 545112 - | hypothetical protein TERM 548 545184 - 545160 - G 80 -9.9 -4.08945 | overlap 545170 545173 ATCATCCCTGGAAAA CAGCACGCAAG GAC CTCGCGAGCCG CGCGGATCATAGGCA Atu3495 547903 - 545969 - | GGDEF family protein Atu3496 548419 - 547913 - | hypothetical protein Atu3497 548947 - 548600 - | hypothetical protein Atu3498 549017 - 550453 + | aldehyde dehydrogenase TERM 549 550492 - 550466 - f 100 -15.2 -4.04206 | overlap 550491 TGATTTTTACAGAAA CTTCTTCTCCCC GCC GGGGAGAAGATG CCCGAATGGCAGATG Atu3500 550981 - 551793 + | hypothetical protein Atu3501 552834 - 551809 - | ABC transporter, nucleotide binding/ATPase protein TERM 550 552851 - 552870 + r 71 -10 -3.60925 | overlap 552848 552852 552852 552854 GGAATCAGGTCTCCG TGGCGATG GCGG CATCGCCG TTGGTCTTTTTGGCA Atu3502 553727 - 552840 - | ABC transporter, membrane spanning protein Atu3503 554564 - 553731 - | ABC transporter, membrane spanning protein TERM 551 553982 - 553966 - G 70 -10.8 -3.44888 | overlap 553964 AAGGAGAGCGAAAGA CCGGCG AGCAG CGCCGG CGTCAGCAGCGGCAG TERM 552 554602 - 554575 - R 80 -9 -4.08144 | opp_overlap 554577 554596 554597, overlap 554576 554579 CCCATCAATCATAAA GCGACCCGGCAG TTTC CCGCCGGGTCTT TTGACCGTTCTCTAT TERM 553 554601 - 554576 - R 81 -12.5 -3.04404 | opp_overlap 554577 554596 554597, overlap 554575 554579 CCATCAATCATAAAG CGACCCGGCAG TTTC CCGCCGGGTCT TTTGACCGTTCTCTA TERM 554 554577 - 554600 + r 100 -13.8 -4.16251 | opp_overlap 554576 554575 554579, overlap 554596 554597 CATCAATCATAAAGC GACCCGGCAG TTTC CCGCCGGGTC TTTTGACCGTTCTCT TERM 555 554598 - 554579 - R 76 -12.8 -2.7361 | opp_overlap 554577 554596 554597, overlap 554576 554575 TCAATCATAAAGCGA CCCGGCAG TTTC CCGCCGGG TCTTTTGACCGTTCT Atu3504 555612 - 554626 - | ABC transporter, substrate binding protein (sulfate) TERM 556 555389 - 555353 - G 70 -4.5 -4.46212 | gap 1, overlap 555354 TGCTTCACCAGAAAA TCGACATCCGTCACCT GGTTAA AGGTGACG-ACATCGG CTTCCAGCCCCTCAA Atu3505 556834 - 555782 - | enoyl-CoA hydratase TERM 557 557236 - 557195 - g 77 -11.5 -3.66908 | gap 1, overlap 557191 CTCTGGGAAAAGGAA GGCC-ATCCCCATGGCCGCG ATG CGCAGCATTGGGAACAGGCC AGGCATGAATTTTCG TERM 558 557310 - 557297 - g 85 -5.9 -5.055 | opp_overlap 557299, overlap 557280 GCAACGCGCAAAAAA GCCGC TCCC ACGGC GATTGTTGACGTTGC Atu3506 556991 - 557392 + | hypothetical protein TERM 559 557426 - 557459 + T 84 -13.9 -3.04144 | opp_overlap 557426 557432, overlap 557432 AACAAAGCCCCAAAT GAAAAAGCCCGACGA AATC TCGCCGGGCTTTGTC TGTTAGCGCTGGGCG TERM 560 557459 - 557426 - T 86 -16.1 -2.79175 | opp_overlap 557426 557432, overlap 557432 AACAAAGCCCCAAAT GAAAAAGCCCGACGA AATC TCGCCGGGCTTTGTC TGTTAGCGCTGGGCG TERM 561 557453 - 557432 - T 100 -13.7 -4.98531 | opp_overlap 557426 557432, overlap 557426 GCCCCAAATGAAAAA GCCCGACGA AATC TCGCCGGGC TTTGTCTGTTAGCGC TERM 562 557432 - 557453 + T 88 -11.5 -4.2074 | opp_overlap 557432 557426, overlap 557426 GCCCCAAATGAAAAA GCCCGACGA AATC TCGCCGGGC TTTGTCTGTTAGCGC Atu3507 558241 - 557462 - | hypothetical protein TERM 563 559114 - 559087 - g 95 -13.4 -4.07568 | gap 1 CTTCGCCGCCGAAAA CGTGCTGCGCTGG CTG CC-GCGCGGCACG CACCAGTATGAAAAG ubiG 558539 - 559291 + | 3-demethylubiquinone-9 3-methyltransferase Atu3509 559805 - 559377 - | hypothetical protein Atu3510 560662 - 559802 - | amidohydrolase grx 560989 - 560687 - | glutaredoxin comF 561793 - 561002 - | competence protein F TERM 564 561743 - 561714 - G 70 -9.9 -3.53712 | gap 1, overlap 561711 561710 AGGCGGAAGAACGAA CGCGCCACCGCGCG TGC CGCG-GAAGGCACG ACGGCGGACTTCGAC TERM 565 562465 - 562489 + G 71 -5.6 -4.43012 | overlap 562466 562482 CCGACGTGCGCGATG TCGGTGCGCT CCTGC AACGCGCCGG TTTTGCTCTTCCCGT Atu3513 561936 - 562817 + | methyltransferase pilA 563050 - 562835 - | fimbriae associated protein Atu3515 563436 - 563122 - | hypothetical protein Atu3516 564022 - 563609 - | MutT family NTP pyrophosphatase Atu3517 564795 - 564019 - | acetyltransferase argJ 566055 - 564814 - | bifunctional ornithine acetyltransferase/N-acetylglutamate synthase protein TERM 566 566104 - 566137 + r 89 -13.8 -3.54984 | opp_overlap 566109, overlap 566100 566099 TGGGAAAGCCTGAGA TGAAACGGGGCGGC CTCGAA GCCGCCCCGTAACA TTGGTATTTATTACT TERM 567 566132 - 566109 - R 100 -17.4 -3.8377 | opp_overlap 566104 566100 566099 AAGCCTGAGATGAAA CGGGGCGGCC TCGA AGCCGCCCCG TAACATTGGTATTTA ppiD 567014 - 566148 - | peptidyl-prolyl cis-trans isomerase TERM 568 568404 - 568381 - g 71 -6.6 -4.2828 | gap 1 CCGCATGTATGAAAA GCTG-GCCGGC ATG ACCGGCACGGC ATCGACGGAAGCGGA TERM 569 568897 - 568885 - g 71 -6.2 -4.4078 | opp_overlap 568890, overlap 568887 GGTGCTGAAGGAAAA GGCG CTCGC CGCC GGCGGTCTCTACGTC secA 567257 - 569965 + | preprotein translocase subunit SecA TERM 570 569992 - 570017 + F 100 -17.7 -4.86731 | opp_overlap 569992 TATGCCAGAGATCAA TCGCCCGTAAC CCGC GTTACGGGCGA TTTTGTTTGCGCCGG TERM 571 570017 - 569992 - f 100 -17.7 -3.32498 | opp_overlap 569992 TATGCCAGAGATCAA TCGCCCGTAAC CCGC GTTACGGGCGA TTTTGTTTGCGCCGG Atu3521 570113 - 571006 + | permease TERM 572 570991 - 571010 + F 71 -5.7 -4.24711 | AAAGGCGCCACCTAC CCCTTCG GGCGCG TGAAGGG TTTATTAGCGTTTTC TERM 573 571057 - 571068 + F 74 -7.2 -4.07568 | GGTCGTCACGGCGCA CGCG GGAT CGCG TTTTCGGCGCGGGGG Atu3522 571088 - 572290 + | glucans biosynthesis protein TERM 574 572401 - 572374 - g 79 -8.4 -4.57341 | overlap 572400 AACTCGGCGGAAAAA GCCTTACCCGCA AGCC TGCGCGCAAAGC TTGCGCCGCTGGCGG Atu3523 572347 - 573762 + | polysaccharide biosynthesis associated protein TERM 575 573890 - 573862 - g 70 -12.3 -2.87132 | opp_overlap 573860, overlap 573865 GTCCCGCGGCAGACA GCAGCCGGCGCGT GGG ACGCGACGGCCGG GAATTCTGCATCTAT TERM 576 573887 - 573865 - g 77 -14.8 -2.69151 | opp_overlap 573860, overlap 573862 CCGCGGCAGACAGCA GCCGGCGCGT GGG ACGCGACGGC CGGGAATTCTGCATC Atu8188 573771 - 575042 + | hypothetical protein TERM 577 575070 - 575043 - T 95 -17.8 -2.55074 | opp_overlap 575043, overlap 575016 575033 CGCAAGGGCAACTGA TCCGAAGGACGC CGGG GCGCCCTTCGGA TATGTTCGGCAAATG TERM 578 575043 - 575070 + T 93 -15.6 -3.07013 | opp_overlap 575016 575043 575033 CGCAAGGGCAACTGA TCCGAAGGACGC CGGG GCGCCCTTCGGA TATGTTCGGCAAATG Atu3525 575757 - 575095 - | hypothetical protein Atu3527 577103 - 576261 - | hypothetical protein TERM 579 576716 - 576679 - G 71 -5.6 -4.4078 | gap 2, opp_overlap 576697, overlap 576683 TGGCGCGAATGAAAA CACA-GATCGAC-CGGCC ATCC GGCCTTGCCGATCTTGCG CACGTTTCGCCGATA Atu3528 578118 - 577129 - | oxidoreductase uxuA 579308 - 578115 - | mannonate dehydratase TERM 580 578195 - 578223 + g 72 -2.3 -4.79223 | CGAGACCCTTCATGC GGCCGATGTAGGA ATA TCCGGGATTGGTC TTTTTGGTGATGTCA uxuB 580784 - 579312 - | mannitol dehydrogenase TERM 581 579610 - 579590 - G 73 -4.6 -4.62069 | gap 1, overlap 579592 GGGCGACGGCAAAAA GAGCCGCCG CATC CGGC-GCGC CTGCGGCACGCAGCT TERM 582 580281 - 580237 - G 82 -11.9 -3.86202 | opp_overlap 580248 580249, overlap 580241 TCGCAGGAGAGCAAA GTCAGCGGCACAGCCCCGGCG ACC CGCCGGCGCCTTGTCGCTTCC AGCAGAAAACCGAGC TERM 583 580277 - 580241 - G 79 -15.7 -2.69869 | opp_overlap 580248 580249, overlap 580237 AGGAGAGCAAAGTCA GCGGCACAGCCCCGGCG ACC CGCCGGCGCCTTGTCGC TTCCAGCAGAAAACC TERM 584 580248 - 580270 + g 70 -10.4 -3.41878 | opp_overlap 580241 580237, overlap 580249 CAAAGTCAGCGGCAC AGCCCCGGCG ACC CGCCGGCGCC TTGTCGCTTCCAGCA TERM 585 580249 - 580269 + g 72 -13.9 -2.64912 | opp_overlap 580241 580237, overlap 580248 AAAGTCAGCGGCACA GCCCCGGCG ACC CGCCGGCGC CTTGTCGCTTCCAGC TERM 586 580307 - 580291 - G 70 -5 -4.46212 | opp_overlap 580291 580295, overlap 580295 GCTTCCAGCAGAAAA CCGAGC GCGGA GCGCGG CTTTTGCGGATGCGC fabG 581542 - 580802 - | 3-oxoacyl-(acyl-carrier-protein) reductase Atu3532 582314 - 581565 - | GntR family transcriptional regulator TERM 587 582495 - 582480 - g 88 -3.3 -5.53991 | CATGGAGGAAAAAAA CATGA CGTATT TCATG CGCAGCCTCGTCGCT TERM 588 583500 - 583464 - g 74 -3.5 -4.8048 | opp_overlap 583476 CGCCGAGACCAAAAA GCTGCTCGCAAACTTCG ATG CGACGTATCTGAGCTGC AAATAAGCAAGCCTT Atu3533 582466 - 583506 + | ABC transporter, substrate binding protein (sugar) TERM 589 583587 - 583556 - f 72 -12.4 -2.71144 | gap 1 CACGCCCGGCAACCA GCT-CCGCCGGAAAA ACG TCTTCCGGCAGTAGC ATCACGTCGAGGGCA TERM 590 583708 - 583725 + G 80 -3.3 -5.14563 | opp_overlap 583697, overlap 583704 GGAACGAATGGGGTC CAGCCTT TCGC AGGGCCG TTTTTTCCTGACCAA Atu3534 583646 - 584686 + | ABC transporter, membrane spanning protein Atu3535 584697 - 585674 + | ABC transporter, membrane spanning protein Atu3536 585679 - 587220 + | ABC transporter, nucleotide binding/ATPase protein Atu3537 587433 - 587224 - | hypothetical protein Atu3538 587569 - 588084 + | hypothetical protein TERM 591 588131 - 588094 - T 75 -6.1 -4.66833 | opp_overlap 588100 CGGTAAGCGGAAAAA CCGCGTCGCAGTCCTGA AGGA TCAGGGCTGCAGTTCGG TATCCCAGTAAAGAT Atu3539 588672 - 588115 - | hypothetical protein Atu3540 589361 - 588723 - | hypothetical protein TERM 592 589242 - 589184 - G 70 -12.9 -2.94144 | gap 1, overlap 589221 GGTTGAGCGAAATTA CGACCGGCCGCCGG-CGGGCGGTGCCCC ACCC GAGACACGGCGCGACCTGAGGCAGGCCG TCCCGCAACAGACCT Atu3541 589442 - 590044 + | hypothetical protein prp1 590164 - 590955 + | serine/threonine protein phosphatase I dhbK 592664 - 590970 - | 3,4-dihydroxy-2-butanone kinase TERM 593 592136 - 592161 + g 76 -9.7 -4.13767 | gap 1 CGTCCCGGGCGATGC GGGCC-ACCTCT TGA AGAGGAAGGCCC TTTTCCGCTGCGGCC TERM 594 593958 - 593972 + G 85 -5.6 -5.02074 | overlap 593955 CCATCGGGATCGGCG GCGTGG CAG TCGCGC TTTTTTCCAACCTCG arsB 592991 - 594244 + | arsenical pump membrane protein TERM 595 594273 - 594301 + T 100 -16.8 -3.47345 | gap 1, overlap 594298 ACGTATTGAGAGTGA CGTGAAGCGGCGC CGTC GCGCCGCTTC-CG TTGTCCTATCGGATT Atu3545 594644 - 594315 - | hypothetical protein TERM 596 595261 - 595245 - g 76 -5.7 -4.58395 | overlap 595246 GCCACCTTTGAAAAA CCCGCGG TAG CCGCCGA TGGCAATGCCAATTC Atu3546 594873 - 596891 + | hypothetical protein TERM 597 596937 - 596913 - T 75 -12.8 -2.52623 | opp_overlap 596913, overlap 596910 596912 596929 GCCGTCCGACAAGAC CCGGAGGGCC GCAAA GGCCTTCCGG TTTATGGAACGCGCA TERM 598 596913 - 596937 + T 100 -15 -3.85698 | opp_overlap 596910 596913 596912 596929 GCCGTCCGACAAGAC CCGGAGGGCC GCAAA GGCCTTCCGG TTTATGGAACGCGCA Atu3547 597617 - 596961 - | hypothetical protein TERM 599 597442 - 597401 - G 70 -10.1 -3.53012 | gap 1, overlap 597402 TGCCCTTGGCCGAAA CCCGCGCCGCGATC-CAGAC CTC GTCTGCGATGGCCGCGCGAT CGACGGCCTGCAGGA TERM 600 597441 - 597402 - G 73 -13.6 -2.71712 | gap 1, overlap 597401 GCCCTTGGCCGAAAC CCGCGCCGCGATC-CAGAC CTC GTCTGCGATGGCCGCGCGA TCGACGGCCTGCAGG Atu3548 598988 - 597762 - | glycosyltransferase TERM 601 598867 - 598846 - G 71 -5.9 -4.42238 | gap 1 GCAGCGGAATCAAAA TCGA-ACACC ATC GGCGTATCGA TATAGACGAAATGAA Atu3549 600322 - 598985 - | hypothetical protein TERM 602 600153 - 600135 - G 77 -3.8 -4.87318 | overlap 600136 CCGAAAACGGAAAAA GGATCGCA GGC TACGATCA ATATCCGATTTAGGT Atu3550 601793 - 600315 - | putative succinoglycan transport protein Atu3551 603190 - 601955 - | glycosyltransferase TERM 603 602444 - 602467 + g 74 -3.7 -4.75308 | opp_overlap 602448, overlap 602427 GCCGATTTCCTTGAA GGCATCGAC CATGTT GCCGACGCC TTTTTCGGTGTTGAT TERM 604 603025 - 603045 + g 76 -9 -4.13945 | gap 1, opp_overlap 603014 603025 GGAACATGCGGTAAA CGGTGACGC CATT GCG-CACCG TTTTCGGCTCGGCCT TERM 605 603367 - 603354 - H 71 -4.5 -4.58395 | gap 1 TCTACTTTTCAAAAA GCACGG GAA CCG-GC GGCATTTCAAGTGAT Atu3553 603686 - 605014 + | hypothetical protein TERM 606 605179 - 605169 - g 74 -4 -4.78107 | GACGATGATGAAAAA CTTT ACG AAAG CGCCCGCAACCGGGG TERM 607 605197 - 605179 - g 71 -8.8 -3.79623 | opp_overlap 605193 AAAAACTTTACGAAA GCGCCC GCAACCG GGGCGC AGCGTCTTGATGTTC Atu3554 605158 - 605658 + | hypothetical protein TERM 608 606512 - 606471 - g 72 -12.7 -3.10255 | opp_overlap 606477 AGAATATCCAGGGAA CGGCAGCCGGCCCGGCGGC AGCG GCCGCAGCGCCTGCAGCGG CATCGCCGATCGGCG Atu3555 605840 - 606766 + | hypothetical protein TERM 609 608267 - 608307 + G 74 -5.3 -4.56597 | gap 1, overlap 608257 TCATGGGCGCAGCGG CCGGCGGCGGCA-TCGCG ATTTTC CGCGAATTCCGCGATCGG TTTTTCCGCACCGGC TERM 610 608871 - 608850 - g 70 -10.1 -3.47349 | opp_overlap 608849 GGCGCAAATGCACAA GCTGCTGGC CGAA GCGAGCAGC GCTTTCGACTACATC Atu3556 606898 - 609147 + | exopolysaccharide polymerization/transport protein Atu8033 609161 - 609817 + | hypothetical protein Atu3557 609950 - 611419 + | hypothetical protein TERM 611 611693 - 611683 - g 70 -3.2 -4.60713 | GAAAATATTACAAAA TCGC CGT GCAA CTGGACCCACGCCTC TERM 612 612123 - 612084 - g 71 -8.4 -4.09685 | gap 1, opp_overlap 612084 612095 612102, overlap 612085 CCGGACGCGCCAAAA CCGTGCACTGCCCGCGCGC CAG GCGCGCCAGTAGCGC-CGC TGGTCTTCGGTTATC TERM 613 612285 - 612268 - g 89 -4.7 -5.1861 | opp_overlap 612271 612271 612278, overlap 612271 CTTATCAGCAAAAAA CAGCCGG CCTC CCGGTCG AGTTTCCGGGTTATG Atu3558 611436 - 612650 + | glycosyltransferase Atu3559 613799 - 612705 - | glycosyltransferase Atu3560 615000 - 613852 - | glycosyltransferase TERM 614 614708 - 614688 - G 85 -5.3 -5.05601 | overlap 614682 GAGCACAGACAAAAA GCGCCTTTT GCG AATTGGCGC AGATCACATCAAAAT Atu3561 615376 - 615840 + | hypothetical protein TERM 615 615947 - 615962 + G 70 -4.6 -4.46581 | overlap 615949 GGGATTTTGCGTGAT GAGCGC CTTT GCGCTG TTTTATGCAATTTTC Atu3562 615816 - 616241 + | hypothetical protein greB 616778 - 616296 - | transcription elongation factor regulatory protein TERM 616 616857 - 616827 - H 81 -12.7 -3.05596 | gap 1, opp_overlap 616850 CATCTTCCGATCCAA TCTTGCCATCGCCC ACAG GGGC-ACGGCAAGA CCACGCCGTTGGTTC exsH 617050 - 618447 + | endo-1,3-1,4-beta-glycanase TERM 617 618482 - 618455 - T 100 -13.5 -4.21194 | opp_overlap 618457 CGGCATGACTTAAAA CACCGGCAATC GTACTT GACTGCCGGTG TTCACATATCAACCC Atu3565 619505 - 618525 - | hypothetical protein TERM 618 618775 - 618765 - G 77 -8.2 -4.38154 | overlap 618753 618751 618766 618767 ATAGGGCTCATAAAA GCCC TGC GGGC GGCCGAAGGAATCAT Atu3566 620321 - 619899 - | hypothetical protein Atu3567 620882 - 620391 - | hypothetical protein TERM 619 620686 - 620665 - G 78 -2.9 -5.03715 | gap 1, overlap 620666 620667 ACGATCTCGAAAAAA TGCCCGCCTG CCA CCAGCG-GCA TGCGAAAGAGAATAT TERM 620 621140 - 621150 + G 89 -6.8 -5.08824 | overlap 621119 CGCGCTGTGAAGCGG TGCG GGA CGCA TTTTTTCCGTCCAAG Atu3568 621079 - 623007 + | hypothetical protein TERM 621 623249 - 623271 + G 70 -10.4 -3.53343 | opp_overlap 623247, overlap 623236 TCAGGGCATCGAAGC CCTCGTCGCC GGC GGCGCCGTGG TTTCCGAAGCCGATT Atu3569 623016 - 623444 + | hypothetical protein Atu3570 623482 - 624678 + | hypothetical protein Atu3571 624678 - 625391 + | hypothetical protein TERM 622 625448 - 625467 + G 100 -7.8 -5.52384 | gap 1, overlap 625447 TTGATCCGCACGGTC GCG-CTGGC ATT GCCGGCCGC TTTTTTTGCTAGAAG Atu8113 625388 - 626539 + | hypothetical protein TERM 623 626828 - 626806 - g 71 -5.4 -4.37527 | overlap 626807 626808 CCAGAAGTATGAAAA GGGCGCCAAC CGC GTCGGCGCGT CCCGTCTGCAGGCCA Atu3572 626666 - 627103 + | transcriptional regulator Atu3573 627132 - 627431 + | hypothetical protein TERM 624 627571 - 627598 + T 100 -21.4 -4.0371 | TGTTCCTAGCGTTTG TCGAGGCCCGGT TTTT ACCGGGCCTCGA TTTATATCGGAAGTA xylG 628416 - 627634 - | ABC transporter, nucleotide binding/ATPase protein (xylose) xylH 629748 - 628435 - | ABC transporter, membrane spanning protein (xylose) TERM 625 629808 - 629777 - R 100 -20.9 -3.63627 | TCCTTACATCTGAAA GGCGCCGCGCCAC CTGTTC GTGACGCGGCGCC CAAACATCAACCTAA TERM 626 629852 - 629875 + r 74 -7.4 -4.09805 | gap 1 AGGCCTTGACTGATC CGGCCTTCACA CCC TG-GCAGGCCG TTTCCTTCTTGATCC xylF 630869 - 629829 - | ABC transporter, substrate binding protein (xylose) TERM 627 630400 - 630387 - G 72 -2.3 -4.85782 | overlap 630388 GCCGGCAAAAAGAAA GTCCG CATT CGGAT CGGAAGACGAACCCT TERM 628 630955 - 630975 + H 74 -11.3 -3.26319 | opp_overlap 630955 TCTGTGGTTTCACAA TTTTCTCGA CAG TCGAGAAAA TTAATGTCAGAGATT TERM 629 630975 - 630955 - H 74 -11.3 -3.28712 | opp_overlap 630955 TCTGTGGTTTCACAA TTTTCTCGA CAG TCGAGAAAA TTAATGTCAGAGATT TERM 630 632321 - 632297 - g 86 -18.7 -2.82516 | CCGCTGATGACTATA TTCTGAGCGCC GAG GGCGCTCAGAA GCCCGTGCGGAATTC Atu3577 631102 - 632346 + | transcriptional regulator glpD 633913 - 632366 - | glycerol-3-phosphate dehydrogenase TERM 631 633307 - 633318 + g 89 -7.2 -5.14563 | overlap 633305 633304 GGGCCTTGTGCATGG CCGG CCGG CCGG TTTTTTCGTCCAGCG TERM 632 633596 - 633584 - G 70 -4.7 -4.55697 | overlap 633586 ATTGTCATAAAGAAA CAGGC CGA GCCGG ACCATCCATGATGGA gloA 634497 - 634081 - | lactoylglutathione lyase mutA 636652 - 634511 - | methylmalonyl-CoA mutase TERM 633 636428 - 636414 - G 74 -5.6 -4.56597 | TCGGCGGTGGAAAAA CCGGCA TAT TGGCGG ATGGTCCAGGGCCGC TERM 634 636778 - 636767 - R 74 -7.2 -4.15044 | overlap 636768 TGCGTTCCGAAGAAA CGGC GGCC GCCG TCACTCGAATTCGAG pccA 638782 - 636779 - | propionyl-coenzyme A carboxylase, alpha polypeptide TERM 635 638565 - 638541 - G 73 -9.9 -3.6392 | opp_overlap 638539 638541 GACAGGAAACCATAA CCGGGATGGAC CGC ATCCGCCCCGG TCTTCTGAATCGCCT Atu3582 639206 - 638787 - | hypothetical protein Atu3583 639784 - 639224 - | hypothetical protein TERM 636 639854 - 639835 - R 76 -2.8 -5.07107 | opp_overlap 639835, overlap 639825 CAAATCTCGAAAAAA TTCTCGAA GGAT TCCGGGAA GTTCTGCCGGGCGAC Atu8189 640196 - 639819 - | hypothetical protein Atu3585 641218 - 640322 - | putative glutathione S-transferase YghU TERM 637 640390 - 640410 + g 70 -3.1 -4.64676 | overlap 640391 640392 GGCGTTCATGCAGTT GTTCGGACG GAT CGCCCGAGG TTTTGTTGACGATCA TERM 638 640721 - 640707 - G 76 -5.6 -4.61231 | overlap 640716 GCATAGGCGTAAAAA TGGCCG AAA CCGCCA CCGAGGAACGGCGCG TERM 639 640791 - 640810 + g 70 -5 -4.57073 | opp_overlap 640803 640804 CGGGCATTGCCCTCT TTCGGC AGGAAAGC GCCGAA TTTTTCCGCGAGATA Atu3586 642854 - 641322 - | propionyl-CoA carboxylase TERM 640 642178 - 642194 + g 83 -2.1 -5.22312 | overlap 642179 TCGTTTTCATAGGCG CCATCGG CAA CCGAGGA TTTTTTCGTGTGGGT TERM 641 643044 - 643026 - g 95 -13.8 -4.07568 | opp_overlap 643030 TGGTCTGCGCGAAAA CGCCCGCG CCA CGCAGGCG CAATTTGCCGAACGG TERM 642 643521 - 643540 + G 70 -10.6 -3.55761 | GACCTACGGCATTCT GGCGGCGC ATCT GCGCAGCC TTTACGGCATCCATA Atu3587 642973 - 644391 + | transcriptional regulator alkA 645048 - 644401 - | DNA-3-methyladenine glycosidase II TERM 643 644510 - 644457 - G 71 -5.7 -4.39828 | gap 1, opp_overlap 644479, overlap 644446 644459 644474 AATAGCCCCAGAAAA GTCGGGCGGCGACGG-AACGCCATGG CGA CCAGAGCGTCGCCCGCTCCGCCAGCC ATTTCGCGTCCGGCC gltX 645097 - 645996 + | glutamyl-Q tRNA(Asp) synthetase Atu3590 646881 - 645964 - | transporter TERM 644 646979 - 647001 + H 71 -5.7 -4.26881 | gap 1 GGGCTTTCGGTTCCA TTGC-CGAAA AGGA TTTCGCGCAA TTTAATTTTGTAAAC TERM 645 647089 - 647070 - g 78 -6.4 -4.59511 | opp_overlap 647070 647069 647081 AACATGTCTGAAAAA CCGGTCAT CATC ATCACCGG ATGTTCCTCTGGCAT TERM 646 647696 - 647685 - g 71 -7.2 -4.1891 | GCGGCGGAATATAAA CGCC AACT GGCG CGCATGGATGGGTCA TERM 647 647735 - 647748 + G 73 -9.5 -3.90318 | opp_overlap 647733 647734 CAACCGCCACAAACT CGGCC CCGA GGCCG TTTATGCCGTACTGA Atu3591 647058 - 647891 + | short chain dehydrogenase Atu8190 647909 - 648106 + | hypothetical protein Atu3593 648108 - 648686 + | hypothetical protein Atu3594 648719 - 649492 + | hypothetical protein etfB 649675 - 650421 + | electron transfer flavoprotein beta subunit etfA 650447 - 651376 + | electron transfer flavoprotein alpha subunit TERM 648 651431 - 651384 - f 81 -12.1 -3.59979 | gap 1, opp_overlap 651389 651392, overlap 651386 651389 651391 651395 CTCTTTGATTTTAAA TACATGATGAAGGCGGCGCGTT TTTTG AACGCGCCGCCTTC-TCTTTTT CGGCGATATGCGTAA TERM 649 651429 - 651386 - f 95 -14.7 -3.38046 | gap 1, opp_overlap 651389 651392, overlap 651384 651389 651391 651395 CTTTGATTTTAAATA CATGATGAAGGCGGCGCGTT TTTTG AACGCGCCGCCTTC-TCTTT TTCGGCGATATGCGT TERM 650 651389 - 651426 + F 100 -21.5 -4.59109 | gap 1, opp_overlap 651386 651384 651389 651391 651395, overlap 651392 TGATTTTAAATACAT GATGAAGGCGGCGCGTTT TTT GAACGCGCCGCCTTC-TC TTTTTCGGCGATATG TERM 651 651426 - 651389 - f 100 -20.8 -2.55297 | gap 1, opp_overlap 651389 651392, overlap 651386 651384 651391 651395 TGATTTTAAATACAT GATGAAGGCGGCGCGTT TTTTG AACGCGCCGCCTTC-TC TTTTTCGGCGATATG TERM 652 651425 - 651391 - f 100 -20.1 -2.81089 | opp_overlap 651389 651392, overlap 651389 651386 651384 651395 ATTTTAAATACATGA TGAAGGCGGCGCGTT TTTTG AACGCGCCGCCTTCT CTTTTTCGGCGATAT TERM 653 651392 - 651424 + F 100 -24.3 -3.90762 | opp_overlap 651391 651389 651386 651384 651395, overlap 651389 TTTTAAATACATGAT GAAGGCGGCGCGTTT TTT GAACGCGCCGCCTTC TCTTTTTCGGCGATA TERM 654 651421 - 651395 - f 100 -19.5 -3.29074 | opp_overlap 651392 651389, overlap 651391 651389 651386 651384 TAAATACATGATGAA GGCGGCGCGTT TTTTG AACGCGCCGCC TTCTCTTTTTCGGCG TERM 655 652001 - 651984 - g 84 -3.4 -5.30155 | overlap 651976 CCACCAACGAAAAAA CCTTCG ACGCGG CGAAAG CCTATGTGCGGACGC hbdA 651491 - 652372 + | 3-hydroxybutyryl-CoA dehydrogenase dsbE 653087 - 652419 - | thiol:disulfide interchange protein TERM 656 652531 - 652554 + g 73 -5.2 -4.58283 | AGCAGCAGGGTGGCC GGCAGGCC GAAAGCGA GGCCTTCC TTTTTCAGGACGTTG TERM 657 654141 - 654115 - g 74 -11.6 -3.55453 | overlap 654137 CAGGAAGACAAGGAA CAGGTTTTCGAC TCC GCCGAAAGCCTG GAATTGGCGATTGCC argH 653110 - 654510 + | argininosuccinate lyase TERM 658 654535 - 654568 + G 76 -12.5 -3.28712 | opp_overlap 654542, overlap 654542 GTTACGCTGCGATCA CAAGAAACAGGGTGC ACAA GCGCCCTGTTTTTCG TTATCAGAGAGGCAC TERM 659 654542 - 654561 + G 100 -11.4 -4.93365 | opp_overlap 654542, overlap 654535 TGCGATCACAAGAAA CAGGGTGC ACAA GCGCCCTG TTTTTCGTTATCAGA TERM 660 654561 - 654542 - g 82 -9.2 -4.35483 | opp_overlap 654542 654535 TGCGATCACAAGAAA CAGGGTGC ACAA GCGCCCTG TTTTTCGTTATCAGA TERM 661 654757 - 654737 - g 84 -10.3 -4.19371 | overlap 654727 GAAATGCGCAACAAA CGCGCCGCC GAT GGCAGCGAG CCGAAGCCGGCGACA Atu3600 654497 - 654808 + | hypothetical protein lysA 654822 - 656090 + | diaminopimelate decarboxylase TERM 662 657736 - 657758 + G 70 -9.9 -3.44229 | gap 1 CTCCTGCTGCAATCG GCGCAGACGC GGAT GCGTCT-CGC TTATAATGATGAGAT TERM 663 658495 - 658479 - g 79 -7.9 -4.57569 | overlap 658494 CGACGCGCTGAAAAA CCTGCGG GCA CAGCAGG ATGCCCTCGGCAAGC TERM 664 658796 - 658776 - g 82 -9.6 -4.37886 | TCAGGGCGGACAAAA CGGCCGTG ACCCA CTCGGCCG GCCGCGCAGTACCAC Atu3602 656257 - 658965 + | hypothetical protein Atu8114 659356 - 659150 - | hypothetical protein TERM 665 659448 - 659433 - R 100 -11.8 -5.4505 | opp_overlap 659432 659431 CTCCTCAACAAAAAA GCGGCC CGCC GGCCGC CCTTTAATCTCTGCA Atu3603 659833 - 659474 - | two component response regulator TERM 666 659923 - 659903 - R 86 -12.6 -3.76373 | opp_overlap 659901 659898 TTTTCAAGAGGTAAA CACCCAGC TTTTG GCTGGGTG AATGGTTAATGAGGC hpt 660518 - 659976 - | hypoxanthine phosphoribosyltransferase TERM 667 660461 - 660495 + g 81 -4.8 -5.00616 | overlap 660456 660464 TATCGCGATTGCGCT CGGCGATCTGCTCGGC GGT GTAGAGCGGCTCGATG TTTTTTCCACGGACG Atu3605 661260 - 660589 - | hypothetical protein ftsE 661462 - 662121 + | cell division ATP-binding protein TERM 668 662851 - 662884 + G 100 -21.7 -3.98214 | opp_overlap 662841 662838 GATCAGCCTCAAGGG CGCGGCGGCCGGCAG CGCA CTGGCGGCCGCCGTG TTTCTCGTCGCTGGT TERM 669 662913 - 662951 + G 88 -6.4 -4.97312 | GTTTCTGGCAGTCGA GCACGGTCGCCACGCCGC AGA GCGATCAGGCGAGCGCGC TTTTTGGTTCGTTTT ftsX 662114 - 663121 + | cell division protein TERM 670 663301 - 663320 + G 82 -9.2 -4.37092 | AAGGGCCTGTTGTCG CGGCGTGG CCGT CTGCGCCG TTTTATCCGCGGCCT Atu3608 663235 - 663966 + | hypothetical protein plsC 664081 - 664878 + | 1-acyl-sn-glycerol-3-phosphate acyltransferase Atu3610 665402 - 664851 - | transporter TERM 671 666147 - 666161 + G 80 -11.4 -3.73402 | opp_overlap 666147 666146 CCTTTATGGCACAAG CGGCGA GCT TCGCCG TTTGGTGGCCGATAT Atu8095 665452 - 666453 + | hypothetical protein TERM 672 666611 - 666623 + T 80 -9.1 -4.12267 | ATCCGGCCAAGACTG TCGCC TGC GGCGA TTTACTTCTTCTGAT tyrC 667554 - 666625 - | cyclohexadienyl dehydrogenase TERM 673 667155 - 667145 - G 71 -8.2 -4.10855 | opp_overlap 667145 667151, overlap 667135 AAAAGGCCGGCAAAA CCGG CAT CCGG GCCGGATTTTTCCGT TERM 674 667151 - 667161 + g 78 -6.8 -4.67353 | opp_overlap 667145, overlap 667145 CCGGCAAAACCGGCA TCCG GGC CGGA TTTTTCCGTACCTGC hisC 668660 - 667554 - | histidinol-phosphate aminotransferase TERM 675 668697 - 668681 - R 83 -7.9 -4.57569 | overlap 668682 668691 668692 CGACCTTTGGAAAAA CGCCGGA GAA CCCGGCA AAAGCAATGCCGGAG Atu3613 669506 - 668745 - | hypothetical protein TERM 676 668994 - 668979 - G 78 -10.4 -3.90744 | overlap 668982 GGTGGGTGGAAAGAA CAGCGC CTCG GCGCTG GCGCCCGGCGTGAAA gloB 669626 - 670396 + | glyoxalase II Atu3615 670408 - 670836 + | hypothetical protein TERM 677 670872 - 670899 + T 91 -17.2 -2.78384 | opp_overlap 670858, overlap 670851 AGCGTGTGCCCCTTG TTTCTTCTCCCC AGTC GGGGAGAAGAAA TATGCTACGCCGCCG Atu3616 671718 - 670945 - | hypothetical protein rpmB 671971 - 672261 + | 50S ribosomal protein L28 TERM 678 672288 - 672326 + F 100 -14.7 -4.48743 | opp_overlap 672279 672293, overlap 672293 ACATCATCTGATATT CAGAAGGCTTGAATGGC TTTTC GCCGCTCAAGCCTTTTG TTTGTTTCAGATTTT TERM 679 672293 - 672321 + F 100 -11 -5.18866 | opp_overlap 672293, overlap 672288 ATCTGATATTCAGAA GGCTTGAATGGC TTTTC GCCGCTCAAGCC TTTTGTTTGTTTCAG TERM 680 672321 - 672293 - f 75 -11 -3.39505 | opp_overlap 672293 672288 ATCTGATATTCAGAA GGCTTGAATGGC TTTTC GCCGCTCAAGCC TTTTGTTTGTTTCAG Atu3618 672427 - 673065 + | hypothetical protein Atu3619 673177 - 673512 + | hypothetical protein Atu3620 674541 - 673516 - | hypothetical protein TERM 681 674490 - 674471 - G 74 -12.8 -3.24289 | overlap 674464 674466 ACGGGAAACAGCGAA GCCGCCGC AAGA ACGGCGGC CAGCGCAAAAGACTT cobT 676435 - 674531 - | cobyrinic acid synthase TERM 682 675202 - 675220 + g 71 -6.6 -4.20367 | opp_overlap 675193 GAGAAACGACGGTAT CGCGGAAC TTG GTGTCGCG TTCTTTCTTGAAGGA TERM 683 675918 - 675934 + g 70 -3.6 -4.58395 | overlap 675918 675924 675928 AGGTCGAGAACCTTG CCAGCG CTCGC CGGTGG TTTTTCGCCGGTCAG TERM 684 676458 - 676503 + r 100 -16.2 -3.07043 | overlap 676498 CCTGTCATTTGTCGG CGCCTG-CGGCACGCCCATCCT CTTC AGGATGCGCG-GCCGGCCGGCG TCTTCAAGTCATCGG TERM 685 676551 - 676575 + r 100 -14.3 -3.91911 | opp_overlap 676561 ACCGGGGATGATCAG GCGCTGAGAAC GAT GTTCGCAGCGC TTTCCTTCAGCTCGA cobS 677536 - 676547 - | cobalamin biosynthesis protein TERM 686 677507 - 677476 - G 71 -6.7 -4.15106 | gap 3 TATCAATGCCGAAAA CCT-CCCG-CACGGAC ACT GTC-GTGTCGGGCAGG TTGGAAATATCAAGG dnaJ 678240 - 677605 - | DnaJ family molecular chaperone TERM 687 677690 - 677704 + g 76 -6.4 -4.57569 | overlap 677700 CGATCGCCACCATTA GCATCA GGA TGGTGC TTTTTGACAAGCTCC bolA 678355 - 678636 + | stress induced morphogen aroB 679789 - 678656 - | 3-dehydroquinate synthase aroK 680376 - 679795 - | shikimate kinase Atu3627 680531 - 680373 - | hypothetical protein Atu3628 680564 - 680737 + | hypothetical protein TERM 688 680988 - 681003 + G 73 -4.6 -4.67607 | GCGTCTCTCCTCCAT GCGGCA GTTT TACCGC TTTCTTTATTCGGAA TERM 689 681429 - 681410 - g 95 -2.7 -5.60993 | opp_overlap 681423, overlap 681414 CTTCCCAGAAAAAAA CGGACAC AGCTGA GAGCCCG TGGCTGTTTCCCTCG xerD 680734 - 681729 + | site-specific tyrosine recombinase XerD TERM 690 681984 - 681974 - g 74 -6.8 -4.37092 | ATGCTTGGCAGAAAA CGCA GGT TGCG CGTCATCCGCAGCGC TERM 691 682410 - 682432 + G 71 -7.6 -4.08706 | CTCGGGCGGCGCGAT CGCCATTGCC ACC GGCAACCGCG TTTATATGCTCGAAC accA 681793 - 682746 + | acetyl-CoA carboxylase carboxyltransferase subunit alpha TERM 692 682848 - 682806 - f 91 -7 -5.27335 | opp_overlap 682800 682810 682815, overlap 682807 682810 GCGTTCAAAGAAAAA GTTATATCACTTGGCGGTCC GAA GAACGGCCAGGTGATATGAG TTCGGCCTTAATTTC TERM 693 682847 - 682807 - f 76 -10.5 -3.75678 | opp_overlap 682800 682810 682815, overlap 682806 682810 CGTTCAAAGAAAAAG TTATATCACTTGGCGGTCC GAA GAACGGCCAGGTGATATGA GTTCGGCCTTAATTT TERM 694 682844 - 682810 - f 75 -12.2 -2.95994 | opp_overlap 682800 682810 682815, overlap 682807 682806 TCAAAGAAAAAGTTA TATCACTTGGCGGTCC GAA GAACGGCCAGGTGATA TGAGTTCGGCCTTAA TERM 695 682810 - 682844 + F 71 -12.2 -2.53911 | opp_overlap 682810 682807 682806, overlap 682800 682815 TCAAAGAAAAAGTTA TATCACTTGGCGGTCC GAA GAACGGCCAGGTGATA TGAGTTCGGCCTTAA TERM 696 683114 - 683127 + F 71 -8.1 -3.89346 | opp_overlap 683113 683114 CGATACGCTTGAAAC CGTCG AACG CGACG TTTCTCACGTCAAGA Atu3631 683199 - 684338 + | hypothetical protein Atu3632 684335 - 684571 + | hypothetical protein Atu3633 685919 - 684795 - | hypothetical protein TERM 697 685271 - 685284 + g 70 -3.7 -4.72272 | overlap 685272 685281 CTTCGCCCAGCCAGC GGCCG ACAT CGGCA TTTTTGCTGGAGACA TERM 698 685999 - 686029 + r 71 -9.6 -3.484 | opp_overlap 686001, overlap 686000 CACGGAACGAAAAGA AATCGCCCGTGGCT GGA AGCCACGAGCGACA TTGTAATATCATAAC TERM 699 686000 - 686028 + r 75 -13.1 -2.68719 | opp_overlap 686001, overlap 685999 ACGGAACGAAAAGAA ATCGCCCGTGGCT GGA AGCCACGAGCGAC ATTGTAATATCATAA TERM 700 686027 - 686001 - R 100 -18.8 -4.78077 | opp_overlap 686000 685999 CGGAACGAAAAGAAA TCGCCCGTGGCT GGA AGCCACGAGCGA CATTGTAATATCATA TERM 701 686082 - 686096 + r 70 -9.2 -3.62096 | opp_overlap 686073 AACGCATTGCGGCAT CGGGCT CGA GGCCCG TTTCCGCTGATCAGA dacF 687276 - 686107 - | penicillin-binding protein dacf precursor Atu3635 687389 - 688552 + | amidohydrolase TERM 702 688614 - 688585 - T 71 -10.7 -3.16288 | opp_overlap 688591, overlap 688583 688604 688605 GAAAGCCGAGGAAGA GATCGACCGCGAT GAAG AACGCGGTTGATC CGCAGGCATGGTCAG Atu3636 689732 - 689286 - | hypothetical protein TERM 703 689592 - 689618 + g 71 -5.8 -4.29106 | gap 1, opp_overlap 689588 689590, overlap 689590 CGCGGACAAAAGCGC CGGTCGGTGCG GACGTA CGC-CCGGCTG TTTGTTGATATCAAC rpsU 690120 - 689890 - | 30S ribosomal protein S21 TERM 704 690158 - 690146 - R 82 -5.5 -5.02074 | overlap 690147 TGAGGTCGTAAAAAA CGGTG CGC CACCA TACGCAATTTGGCGT Atu3638 691503 - 690379 - | hypothetical protein Atu3639 692238 - 691507 - | hypothetical protein Atu3640 693821 - 692241 - | hypothetical protein TERM 705 692419 - 692439 + g 79 -9.7 -4.27316 | overlap 692431 CCCATAGAACTATTC TCGGAAAGG CCA CCTATCCGA TTTTCAATTGGCAAG Atu3641 694927 - 693818 - | hypothetical protein vgrG 697205 - 694941 - | vgrG protein TERM 706 695267 - 695237 - G 81 -13.3 -3.38046 | gap 1, overlap 695235 695258 CCGGCAGCGGAAAGA GGCCCGAGGCATCG GAAC CGACGCC-CGAGCC GGAGCCGGCAAGTGC TERM 707 697453 - 697431 - g 76 -6.9 -4.56597 | gap 1 CTGCGCCGCGAAAAA GCCGCCGGGG CTCA CCACGG-GGC CGGATGGTGGGTCAG TERM 708 697732 - 697720 - g 85 -6.3 -5.03715 | overlap 697727 697729 ATGAGGGGCAAAAAA GAGAA AAC TTCTC CATCGCCAAGCTAGG TERM 709 697757 - 697727 - g 80 -3.2 -5.06052 | gap 1, overlap 697720 697729 GCAAAAAAGAGAAAA CTTCTCCATCGCC AAGCTA GGCGA-GGAGGCG GCAAAATCGATGGCG Atu3643 697335 - 698270 + | hypothetical protein Atu3644 698498 - 698953 + | hypothetical protein TERM 710 699337 - 699352 + G 93 -11.8 -4.37886 | opp_overlap 699337 GTCCAAACATAAAAA GGCGGC ATAA GCCGCC TTTTGTCCACCCTCA TERM 711 699352 - 699337 - g 100 -11.8 -5.19879 | opp_overlap 699337 GTCCAAACATAAAAA GGCGGC ATAA GCCGCC TTTTGTCCACCCTCA Atu3645 699072 - 699479 + | hypothetical protein Atu3646 699901 - 699476 - | hypothetical protein Atu3647 700032 - 700277 + | hypothetical protein Atu3648 700693 - 700914 + | hypothetical protein TERM 712 700913 - 700903 - f 75 -6.8 -4.41047 | ACCGGCGAAGCAAAA CACG CAG CGTG AATCCGCTCAACACT Atu3650 701397 - 701972 + | hypothetical protein Atu3651 702043 - 702909 + | hypothetical protein Atu3652 703047 - 703889 + | hypothetical protein Atu3653 704173 - 703937 - | hypothetical protein Atu3654 705242 - 704727 - | hypothetical protein Atu3655 705579 - 706145 + | antioxidant enzyme TERM 713 706502 - 706536 + G 73 -10 -3.62046 | overlap 706493 GAATGTGGCGTGGGA CGGAGGTGTCCACG CCTTCAT CCTGGACACCTGCG TTATTCCCCGGATGC Atu3656 706326 - 706712 + | acetyltransferase Atu3657 706981 - 707229 + | hypothetical protein Atu3658 707492 - 708577 + | MerR family transcriptional regulator TERM 714 708704 - 708646 - T 100 -15.5 -3.49728 | gap 2, opp_overlap 708660, overlap 708643 708660 AAATCAAAAAGGGAA TTTCTGTCGCAGAACTCGGTCGCAAAACT CAG AGTTTCGCGGCCGAGTTCTGCGACGGC-- GTACGTCCCCAATGG TERM 715 708660 - 708692 + T 100 -17.1 -3.28924 | opp_overlap 708643 708646 708660 ATTTCTGTCGCAGAA CTCGGTCGCAAAACT CAG AGTTTCGCGGCCGAG TTCTGCGACGGCGTA TERM 716 708692 - 708660 - T 100 -17.1 -3.28791 | opp_overlap 708660, overlap 708643 708646 ATTTCTGTCGCAGAA CTCGGTCGCAAAACT CAG AGTTTCGCGGCCGAG TTCTGCGACGGCGTA Atu3661 709745 - 709086 - | hypothetical protein Atu3662 710360 - 711970 + | hypothetical protein Atu3663 712619 - 712197 - | hypothetical protein TERM 717 713235 - 713221 - g 70 -4.2 -4.4891 | opp_overlap 713221 CTCAGGATGACAAAA GCTTGT TCT ACACGC TTTATTTTCAAGACC TERM 718 713221 - 713235 + G 73 -4.2 -4.64861 | opp_overlap 713221 CTCAGGATGACAAAA GCTTGT TCT ACACGC TTTATTTTCAAGACC ephA 712794 - 713765 + | epoxide hydrolase ditI 714784 - 714038 - | short-chain dehydrogenase Atu8034 714854 - 715033 + | hypothetical protein Atu3666 715046 - 715504 + | hypothetical protein panD 715559 - 716026 + | aspartate alpha-decarboxylase Atu3668 716579 - 716058 - | siderophore biosynthesis protein TERM 719 716250 - 716239 - G 91 -5.8 -5.42862 | AGACGGGCAAAAAAA GACG AGGT CGTC GAGACGATGCGGCCG Atu3669 718055 - 716694 - | siderophore biosynthesis protein TERM 720 716901 - 716873 - G 71 -6.5 -4.26076 | overlap 716874 TCAGGCTGACGAAAA CCGGCCAGCGGAC ATC GCCCACCGCCCGC AGCGATTGAAAGAGG TERM 721 717530 - 717520 - G 72 -2.4 -4.78149 | GCGAGAAGGTAAAAA GCCG ACA CGCC CACCCCGAATGCCAG Atu3670 721473 - 718087 - | siderophore biosynthesis protein TERM 722 718355 - 718340 - G 80 -3.2 -5.03314 | CCCAGCTCGAAAAAA TTGTCG TTGA CGCCAA TATCCGCACGCTTCA TERM 723 720598 - 720580 - G 71 -9.6 -3.79021 | overlap 720590 GAAAACGGCAGCAAA CACCACAA AGG TCGTGGTG CCGAGTTTGGCGGCC TERM 724 720826 - 720808 - G 73 -8.8 -3.85698 | overlap 720818 CCTGGCGCGGACAAA GCCGCCAT AAG ATCGCGGC AAGGGATCGAGGACC TERM 725 720955 - 720936 - G 78 -6.4 -4.72272 | opp_overlap 720942 CCGTGTGATGAAAAA CGAACACG AGAA CATGCTCG TTTTGTCCAAGCTGC Atu3671 722551 - 721484 - | siderophore biosynthesis protein TERM 726 722207 - 722218 + g 71 -5.8 -4.36914 | opp_overlap 722207 CGGCTCCTTCGAAAA GACG AACT CGTC TTTTGTCCAGCCGGC Atu3672 727153 - 722591 - | polyketide synthase, siderophore biosynthesis protein TERM 727 725166 - 725146 - G 71 -6 -4.42386 | overlap 725147 CTTTGAGGGAGAAAA CCCCGGCC AGGCA GGCCGCGA CATATTCACCGACGC TERM 728 725804 - 725839 + g 82 -12.6 -3.60475 | gap 1, opp_overlap 725802 725803 CCCCATGCCGAAAGC GCTGATGGCGGCACGGC GCG GCC-TGTCGGCATCGGC TTTCCAGTCGGACTT TERM 729 726661 - 726604 - G 73 -10.6 -3.64599 | gap 3 CGATCATACCGGAAA CATTGCCGAGCCCTGCCTGCAGCGGC-GC CAC GCTGTCGC-GCAGGGTGGGGTCGG-AATG GATATGGGTGAAGTG TERM 730 727025 - 727011 - G 84 -11.4 -4.11216 | TCGGCACCGGGAAAA CGGCCT GCA AGGCCG ATGATCGCGACGCGC Atu3673 729447 - 727195 - | siderophore biosynthesis protein TERM 731 727401 - 727390 - G 76 -5.8 -4.59853 | opp_overlap 727389 CGAATGCTCGAAAAA CAGC GTCG GCTG CGTTCTGACACCCAG TERM 732 727758 - 727718 - G 71 -6.6 -4.18018 | TGGCGGCAGGCAAAA CGCCGCACCTTGCCGCTC GGCGT GCGCGGCAGGCTGCTGGG GCGGATGAGGACGAT Atu3674 729723 - 729520 - | hypothetical protein TERM 733 733168 - 733147 - g 70 -4.4 -4.53705 | overlap 733148 AAGCGCGATATAAAA CTGGACGA CGCAAT TCGCCCAA GCGCGACGGCAAAAG Atu3675 729769 - 734331 + | peptide synthetase, siderophore biosynthesis protein Atu3676 734328 - 735224 + | putative siderophore biosynthesis protein Atu3677 735221 - 736696 + | polyketide synthase, siderophore biosynthesis protein Atu3678 736711 - 736950 + | putative siderophore biosynthesis protein TERM 734 737228 - 737253 + G 100 -15.5 -4.08216 | GATCCCGGCATCGTG GATGTCAGCGG CCTT CCGCTGACGTC TTTTCACGCGAATGA Atu3679 736961 - 737479 + | putative siderophore biosynthesis protein Atu3680 737476 - 738039 + | putative siderophore biosynthesis protein TERM 735 738320 - 738331 + G 78 -4.4 -4.74103 | GAGGGGGCTGACCAG TTCG ACGC CGAA TTTTTCGGTTACAGC TERM 736 741283 - 741299 + G 76 -12.3 -3.30635 | overlap 741294 GGACATGGCGGATCA GGCGATC GCA GATCGCC TTCTGGCGGAATTTA TERM 737 741686 - 741698 + G 73 -10.5 -3.68351 | CAGGCGAACCGGCAG GCGGC AGC GCCGC TTTCGATGATGGACG Atu3681 738077 - 742510 + | polyketide synthetase, siderophore biosynthesis protein TERM 738 744075 - 744058 - g 70 -3.3 -4.58395 | overlap 744060 CGCACGCCGGAAAAA TCCGCAG TGGC CAGCGAA CATGGCAAGCTCACC TERM 739 748599 - 748617 + G 76 -5.9 -4.58395 | opp_overlap 748591 748607 748611, overlap 748611 CCACGAAGCGATCAC CCGGCAA AGTCA TCGCCGG TTTTTGAACGCTCCG Atu3682 742507 - 749706 + | non-ribosomal peptide synthetase, siderophore biosynthesis protein TERM 740 749766 - 749750 - g 75 -7.9 -4.2558 | GACCCCGGAGGAAAA GCGGCAG CTT CTGCAGC GCCTGATGGCTGGAC TERM 741 752298 - 752331 + G 75 -8.2 -4.2338 | gap 3, opp_overlap 752296 AGACTCTACCGAACC GGTGACCTGATGCGGCG TTC CGCCGC--CGGG-CACC TTCTTTATGTTGGTC TERM 742 753317 - 753333 + G 82 -8.7 -4.4261 | CTTCCGCACCGGTCC GCAGGAT CAT GTCCTGC TTTTCCTATTGCACC Atu3683 749718 - 757409 + | peptide synthetase, siderophore biosynthesis protein TERM 743 758199 - 758158 - g 71 -6.8 -4.28548 | gap 3, opp_overlap 758170, overlap 758171 758189 ACGCAGGCAGCAAAA CTGT-GCAGAGACA-TGGGGA TTA CCCCCAATATC-CTGCTACAG GCCGCGCTTGCCATC Atu3684 757414 - 759081 + | siderophore biosynthesis protein Atu3685 759096 - 759842 + | thioesterase, putative siderophore biosynthesis protein Atu3686 759870 - 760763 + | putative siderophore biosynthesis protein TERM 744 760769 - 760781 + F 100 -3.5 -5.86061 | opp_overlap 760769 CCTAAAATAAGATTA TTATT TTC AATAA TTTTTTTTACTCGGG TERM 745 760837 - 760852 + F 79 -7.5 -4.52589 | TCTTCAGCATGAGTG GGCGG ATATTG CCGCC TTTTGTCTGAAACGC Atu3687 760897 - 763335 + | TonB-dependent receptor TERM 746 763342 - 763368 + F 95 -15.1 -3.33265 | AAATTCTGATCCATT TCCTGCGCGGC TCCAT GCCGCGCAGGC TTCCATTTCTGGAGT fecB 763389 - 764309 + | ABC transporter, membrane spanning protein (iron(III) dicitrate) TERM 747 764544 - 764573 + G 74 -11.3 -3.53444 | TGCCCCGCGTCGCGG CGGCCATGATCGC GGGT GCGGGCCTGGCCG TTTCAGGCGCAATCA TERM 748 764626 - 764608 - g 84 -3.1 -5.24531 | gap 2, overlap 764609 764610 AGCCGTGACAAAAAA CCCTCTGGC TTC GCC-G-GGG CTCCTCGGCATCAAT TERM 749 764642 - 764652 + G 75 -8.2 -4.15565 | opp_overlap 764641 CTCCTCGGCATCAAT GCCG GCG CGGC TTTTGCAGTCGTCGC TERM 750 764734 - 764747 + G 74 -3.7 -4.731 | overlap 764725 TGGCGGCGCGGCTTT CGCTG CGTT CTGCG TTTTCTTCATCGGTT TERM 751 765288 - 765307 + G 77 -3.5 -5.00138 | CTGTCGGCGTCACGA TGGCCCT GATCGG AGCGCCA TTTTTCCTTTGGCTG fecC 764306 - 765355 + | ABC transporter, membrane spanning protein (iron(III) dicitrate) fecD 765352 - 766326 + | ABC transporter, membrane spanning protein (iron (III) dicitrate) fecE 766319 - 767122 + | ABC transporter, nucleotide binding/ATPase protein (iron (III) dicitrate) Atu3692 767474 - 768016 + | sigma factor fecR 768064 - 769035 + | two component sensor kinase pbpC 771206 - 769161 - | penicillin binding protein TERM 752 770591 - 770618 + g 73 -4.7 -4.58283 | overlap 770593 CGCGTGCCTGCTTCG CCGCCTCCGGA AAACGG TCCGGGCGCCG TTTTTCCGGCAATTG TERM 753 770775 - 770759 - G 71 -7.9 -4.07868 | opp_overlap 770759 770771 CGATATTCAGATAAA GGTCGAG AAT CTCGGCC TTATCCAGCCGTCTC TERM 754 771201 - 771174 - G 82 -14.8 -3.1855 | opp_overlap 771198 CGCGTCAAGACCGAA GGCCGCGCCGCC GATA AGCAACGCGGCC GTCATGATGCCGGCG Atu3695 776692 - 771236 - | hypothetical protein TERM 755 771393 - 771448 + g 72 -11.1 -3.27525 | gap 1, opp_overlap 771407, overlap 771429 TCCGAACTGTCACCG GCCGAGCG-ATCGAAGGCCGCGACGA AACGG TCGTAGCGGAATTCGGTATGCGCGGC TTCCGTTTCCGGCAA TERM 756 773102 - 773071 - G 70 -10.8 -3.44051 | opp_overlap 773079 TGGCGATGACCACAA CGGGATCACGGATG ATGG CATCCGAGACCGCG TGACCAACACCCGTC TERM 757 774555 - 774534 - G 73 -10.1 -3.64198 | opp_overlap 774534 GCGCCATAGAGATAA CGGCCATCG ACGT CGATTGCCG TTTCCGCGCCCGGAT TERM 758 774534 - 774555 + g 70 -10.1 -3.53091 | opp_overlap 774534 GCGCCATAGAGATAA CGGCCATCG ACGT CGATTGCCG TTTCCGCGCCCGGAT TERM 759 775408 - 775424 + g 71 -6.5 -4.1899 | overlap 775415 TCGAACCCTGCCAGA CGAGTTC GCC GATCTCG TTTTCGATACGGTCG TERM 760 775920 - 775933 + g 70 -3.7 -4.61868 | overlap 775921 TGGCGGGTGCGTAGA TCGGC ATAG GCCGC TTTTGTCTGTGCATC TERM 761 776661 - 776638 - G 78 -3 -5.06414 | overlap 776642 776643 TGGCTGGAAGAAAAA TGAAGGCGGT AGAG ACCGCAACCA ACGAGACCCGGACAA Atu3696 776999 - 776811 - | hypothetical protein TERM 762 776951 - 776927 - G 86 -12.9 -3.86202 | TCCGATCATAGGAAA GCCTGCCCTTC GTC AAAGGGCAGAC CAAAAGCTCCAGCAG lonD 777657 - 777010 - | ATP-dependent protease LA 2 TERM 763 777099 - 777120 + g 84 -9.4 -4.56597 | CCCGCGTCTTCAGGT CGGGCGCT TCCAGC AGCGCCTG TTTTTCGGCCGGACC Atu3698 778718 - 777750 - | putative thioredoxin TERM 764 777842 - 777828 - G 76 -5.6 -4.63527 | overlap 777830 777836 CCAGGACTCGAAAAA CTCCAG AAG CTGGCG GCGCGCGCCGTCATC Atu3699 779281 - 778772 - | hypothetical protein Atu3701 779833 - 780525 + | glutathione S-transferase TERM 765 780659 - 780699 + T 100 -9.7 -5.40072 | opp_overlap 780657 780658, overlap 780661 780665 GGGAGGGGGTAAAGG TTGAGACCCGCTGGCTGTA TTT TACAGTGAGCGGGTTTCCC TTTTTTTGGGCAGCC TERM 766 780661 - 780697 + T 93 -16.7 -2.89655 | opp_overlap 780657 780658, overlap 780659 780665 GAGGGGGTAAAGGTT GAGACCCGCTGGCTGTA TTT TACAGTGAGCGGGTTTC CCTTTTTTTGGGCAG TERM 767 780665 - 780693 + T 100 -13.9 -4.10795 | opp_overlap 780657 780658, overlap 780661 780659 GGGTAAAGGTTGAGA CCCGCTGGCTGTA TTT TACAGTGAGCGGG TTTCCCTTTTTTTGG TERM 768 781019 - 780990 - T 100 -12.3 -5.04987 | opp_overlap 780990 AAGATGCGCAAAAAA TTCGCTTTCCGCA TCGC TGCAAAAAGCGAA TTGTTTCAGGCGGCA trmU 782167 - 781025 - | tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase TERM 769 782390 - 782365 - R 91 -14.7 -3.12351 | opp_overlap 782363, overlap 782368 TGGCCGCACACGCAA GTACGGGGCGG AAAA CCGCCCCGTAA AGTCTTCAGATTCCG TERM 770 782387 - 782368 - R 90 -16.4 -2.77182 | opp_overlap 782363, overlap 782365 CCGCACACGCAAGTA CGGGGCGG AAAA CCGCCCCG TAAAGTCTTCAGATT Atu3704 783610 - 782420 - | hypothetical protein TERM 771 783759 - 783749 - R 76 -5.4 -4.74801 | overlap 783751 GAACCGGAGCAAAAA GTCA CAT TGAC GTGTACGATCCGTGG TERM 772 783928 - 783949 + r 78 -6.5 -4.58395 | CAGATGCCGAGATGT CGTCGGTAA AATT TTGCCGTCG TTTTTCGCCGATCCG TERM 773 784020 - 783991 - R 91 -7.7 -4.86731 | opp_overlap 783990 783991, overlap 783993 784011 CGGGCGGAAATAAAA GAGGCCCGGAGCT ATGA AGATCCGGGCCGA ATATTTTTAAAAGAG TERM 774 784018 - 783993 - R 100 -14.7 -4.05678 | opp_overlap 783991 783990, overlap 783991 784011 GGCGGAAATAAAAGA GGCCCGGAGCT ATGA AGATCCGGGCC GAATATTTTTAAAAG Atu3705 784696 - 784049 - | hypothetical protein TERM 775 785035 - 785020 - R 72 -11.8 -2.71712 | overlap 785019 CGCGGCTGCCGAAAC CGCCGC TGGC GCGGCG TGCCTCTGCCATGTC TERM 776 785322 - 785295 - R 100 -17 -5.46698 | opp_overlap 785294 785293 CGGAAAACCAAAAAA CCCGGCACAGGG TTTC CCCTGCACCGGG CCTTATTGTCCCCTT serA 786949 - 785354 - | D-3-phosphoglycerate dehydrogenase TERM 777 787039 - 787060 + r 70 -9.5 -3.40299 | gap 1, opp_overlap 787034 787033 GTATCAAAATCAGGC GGCAGC-CTT GGA AAGTGCTGCC TTCTGCGTCTGGTAA serC 788211 - 787033 - | phosphoserine aminotransferase TERM 778 788371 - 788397 + r 89 -13.6 -3.57144 | opp_overlap 788371 CCGCCAAAACGAAAA CCGCCCGCACCC GGA GGATGCGGACGG TTTGAAACTACCAGC TERM 779 788397 - 788371 - R 100 -18 -4.67038 | opp_overlap 788371 CCGCCAAAACGAAAA CCGCCCGCACCC GGA GGATGCGGACGG TTTGAAACTACCAGC Atu3708 789270 - 788425 - | outer surface protein TERM 780 789252 - 789262 + g 72 -2.4 -4.77157 | GGACGGCCAGAAATC CGGC CAG GGCG TTTTTCATGACTTCC TERM 781 789407 - 789437 + r 85 -11.3 -3.98282 | gap 1, opp_overlap 789407 789413, overlap 789413 TAGCAAATACTCAAA GA-AAAAGCCGGCT CGAC GGCCGGCTTTTGTC TTTCGTTACTGTCAC TERM 782 789437 - 789407 - R 80 -10.6 -3.82208 | gap 1, opp_overlap 789407 789413, overlap 789413 TAGCAAATACTCAAA GA-AAAAGCCGGC TCGACG GCCGGCTTTTGTC TTTCGTTACTGTCAC TERM 783 789413 - 789430 + r 100 -10.5 -4.84539 | opp_overlap 789407 789413, overlap 789407 ATACTCAAAGAAAAA GCCGGCT CGAC GGCCGGC TTTTGTCTTTCGTTA TERM 784 789430 - 789413 - R 100 -9.8 -5.31519 | opp_overlap 789413 789407, overlap 789407 ATACTCAAAGAAAAA GCCGGC TCGACG GCCGGC TTTTGTCTTTCGTTA mrsA 790811 - 789459 - | phosphoglucomutase/phosphomannomutase TERM 785 789497 - 789510 + g 71 -6.7 -4.17089 | opp_overlap 789488, overlap 789488 789487 AGATGACGCCGACGA GATCG TTGA CGATC TTTTCCACCTTTGCG TERM 786 790874 - 790854 - R 72 -2.5 -4.98255 | GGCGAACGATAAAAA TAGCCGGAA GCG TTTTGGCTA GATGCCACAAACCAC TERM 787 790978 - 790942 - R 100 -16.8 -4.25283 | gap 1, opp_overlap 790948, overlap 790948 ATGTTGTTACCAAAA TG-AAAAGGCCACCCGG AAAC CCGGATGGCCTTTTACA ATCATTCGTTCGCGC TERM 788 790971 - 790948 - R 100 -16 -4.70319 | opp_overlap 790948, overlap 790942 TTACCAAAATGAAAA GGCCACCCGG AAAC CCGGATGGCC TTTTACAATCATTCG TERM 789 790948 - 790971 + r 100 -13.8 -4.17023 | opp_overlap 790942 790948 TTACCAAAATGAAAA GGCCACCCGG AAAC CCGGATGGCC TTTTACAATCATTCG ftsH 792946 - 791000 - | metalloprotease mesJ 794432 - 793101 - | hypothetical protein TERM 790 793160 - 793141 - G 75 -7.9 -4.15044 | GGCCGGCCGAATAAA TTGGCGA TTGCAT TCGCCAA CTCAAGGTCGAAACG TERM 791 793360 - 793316 - G 76 -6.1 -4.65895 | opp_overlap 793317, overlap 793317 GCGCGGACGGAAAAA GCGCTGCGGCCTGGGCAGCGG TAC CCACCCTCCCCGCCGCAACGT TAATTGGAAAGTCCG TERM 792 793707 - 793688 - G 95 -11.4 -4.72272 | GGGCGGCATGAAAAA CCTGCGCA CGTT CGCGCAGG AAAACGGCTGTTCTT Atu3712 795446 - 794457 - | hypothetical protein TERM 793 795066 - 795038 - G 73 -9.6 -3.85817 | gap 1, opp_overlap 795044, overlap 795039 ACGGGGGCGGAGAAA CGGAAGCGCCACC CTGG GGTGGCG-TTTCG ATGATCGTTGCAACG TERM 794 795044 - 795061 + g 82 -12.7 -3.70037 | opp_overlap 795038 795039 GCGGAGAAACGGAAG CGCCACC CTGG GGTGGCG TTTCGATGATCGTTG TERM 795 795566 - 795593 + r 71 -9.8 -3.51329 | opp_overlap 795566 795567, overlap 795567 795571 AAACTATGAAAAAAA CGAAAGGCGGCC CGAA GACCGCCTTTCA TTCTCGTTCACAATC TERM 796 795593 - 795566 - R 100 -14.2 -5.5943 | opp_overlap 795566 795567 795571, overlap 795567 AAACTATGAAAAAAA CGAAAGGCGGCC CGAA GACCGCCTTTCA TTCTCGTTCACAATC TERM 797 795567 - 795592 + r 79 -13.3 -2.70476 | opp_overlap 795566 795567, overlap 795566 795571 AACTATGAAAAAAAC GAAAGGCGGCC CGAA GACCGCCTTTC ATTCTCGTTCACAAT TERM 798 795592 - 795567 - R 100 -15.5 -3.93218 | opp_overlap 795567 795566 795571, overlap 795566 AACTATGAAAAAAAC GAAAGGCGGCC CGAA GACCGCCTTTC ATTCTCGTTCACAAT TERM 799 795571 - 795588 + r 74 -8.3 -4.04295 | opp_overlap 795567 795566, overlap 795567 795566 ATGAAAAAAACGAAA GGCGGCC CGAA GACCGCC TTTCATTCTCGTTCA palA 796153 - 795620 - | omp16 protein TERM 800 795680 - 795701 + g 74 -7.3 -4.42238 | gap 1, opp_overlap 795680 GGACCAGCAGGAAAT GTCG-TCGCA AAC TGCGACCGGC TTTTCCTTGCCGTAG TERM 801 796354 - 796321 - R 100 -24 -4.45544 | opp_overlap 796317 TGGTATCAAGTAAAA CATGACGGCGCCGG TTCATG CCGGCGCCGTCATG GCAGTCATATCAGTC tolB 797671 - 796364 - | translocation protein TolB tolA 798846 - 797692 - | hypothetical protein TERM 802 797997 - 798012 + g 77 -4 -5.00616 | gap 1, overlap 797982 CCGTCTGGCTGAGCG TCGAGCC ACC GG-TCGA TTTTTTCCCACCGAG TERM 803 798204 - 798222 + g 78 -7.4 -4.63184 | overlap 798214 798215 TGGACTTTGCCTGGT CCGGCT TCTTTTC AGCCGG TTTTTCGGCTGGCTT tolR 799314 - 798856 - | tolR protein tolQ 800092 - 799373 - | tolQ protein TERM 804 800137 - 800117 - R 95 -14 -3.75332 | ATCCCCGAATCCAAA CGCCCGGT ACGGG ACCGGGCG ATTCAAACGCGTGTT Atu3718 800794 - 800354 - | hypothetical protein mutT 801446 - 800919 - | MutT/nudix family protein TERM 805 801413 - 801427 + g 71 -5.6 -4.371 | overlap 801386 801414 TGAATTTCATGCGGA TGCGGG TGT CCTGCG TTTTGCTATCATGCG Atu3720 802024 - 801446 - | hypothetical protein TERM 806 801829 - 801806 - G 79 -12.4 -3.53012 | CTGTTCCTCGGCAAA GGCGGCATAC CCGA GTGTGCCGCC CTGCAGGGCATCGAT Atu3721 802278 - 802060 - | hypothetical protein TERM 807 802190 - 802211 + g 73 -5.1 -4.65895 | ATCGTTTTTGCGACA TCGTCGGTA AAGG TCTCGACGA TTTTTCCCTCGCCGG ruvB 803371 - 802331 - | Holliday junction DNA helicase B TERM 808 803010 - 803034 + g 85 -12.9 -3.76224 | opp_overlap 803000 GGATAGAGGATTTCC TCCACCGCC GGGTTGA GGCGGTGGA TTTCATCGATGAAGA ruvA 804075 - 803458 - | Holliday junction DNA helicase motor protein ruvC 804615 - 804103 - | Holliday junction resolvase TERM 809 804264 - 804277 + g 70 -3.7 -4.58685 | overlap 804260 804265 TTTCGCCGTGCCCGA CGCCG ATGA CGGCC TTTTTGACCGCATTT TERM 810 805210 - 805194 - g 70 -4.3 -4.45544 | CTTCATCAAGGAAAA CCCCTTC GGC GACAGGG AAAAGCTGATCAAGC TERM 811 805923 - 805953 + G 77 -4 -5.00616 | overlap 805899 CGTGATCGGCCTCTG TGTTCTTGCTGC CATGTGT GCAGCGACAGCA TTTTTTGCACGGCGC TERM 812 806500 - 806474 - g 73 -10.1 -3.68351 | CTTCCATCACCGAAA CGGCAAGCGCC ATCAA GGCGATTACCG AGGCCGTGCGCGACC Atu3725 804862 - 807171 + | methyl-accepting chemotaxis protein TERM 813 807192 - 807217 + F 95 -6 -5.41143 | opp_overlap 807191 807194, overlap 807193 807194 CCGGCGGACAAAAGG CAGGGGCCTC CTCGGA GAGGCCCCAA TTTTTTTGAACCATC TERM 814 807193 - 807216 + F 76 -9.5 -3.83963 | opp_overlap 807191 807194, overlap 807192 807194 CGGCGGACAAAAGGC AGGGGCCTC CTCGGA GAGGCCCCA ATTTTTTTGAACCAT TERM 815 807194 - 807215 + F 79 -13 -2.89655 | opp_overlap 807194 807191, overlap 807193 807192 GGCGGACAAAAGGCA GGGGCCTC CTCGGA GAGGCCCC AATTTTTTTGAACCA TERM 816 807215 - 807194 - f 79 -13.7 -2.80077 | opp_overlap 807193 807192 807194, overlap 807191 GGCGGACAAAAGGCA GGGGCCTCC TCGG AGAGGCCCC AATTTTTTTGAACCA Atu3726 807318 - 808319 + | flavin dependant oxidoreductase TERM 817 808328 - 808344 + T 71 -9.5 -3.53012 | opp_overlap 808314, overlap 808314 AGCCTAGAATTTCTG GCATTTC CTG GAAATGC TTTAAACAAAAAAGC TERM 818 808384 - 808358 - T 100 -15.9 -5.63517 | gap 1, opp_overlap 808358 GCTTTAAACAAAAAA GCCCCGG-AGCG ATGT CGCTGCCGGGGC TTTTTCTTGAAAGAT TERM 819 808358 - 808384 + T 100 -15.9 -5.06816 | gap 1, opp_overlap 808358 GCTTTAAACAAAAAA GCCCCGG-AGCG ATGT CGCTGCCGGGGC TTTTTCTTGAAAGAT Atu3727 809152 - 808406 - | hypothetical protein Atu3728 809350 - 809853 + | hypothetical protein Atu3729 810543 - 809890 - | hypothetical protein Atu3730 811672 - 810848 - | hypothetical protein Atu3731 812359 - 811772 - | 5-formyltetrahydrofolate cyclo-ligase TERM 820 812335 - 812298 - G 70 -9.8 -3.53012 | gap 1, opp_overlap 812298 812303 TCGGCTGGCGTCAAA GCATCG-CGCGCGGCGA GCCTT TCGCCGCGCAACCTTGC TTTTTCCGCTGCATC TERM 821 812298 - 812335 + g 81 -8.3 -4.62783 | gap 1, opp_overlap 812298, overlap 812303 TCGGCTGGCGTCAAA GCATCG-CGCGCGGCGAG CCT TTCGCCGCGCAACCTTGC TTTTTCCGCTGCATC Atu3732 813636 - 812359 - | hemolysin Atu3733 813851 - 813639 - | hypothetical protein TERM 822 813783 - 813772 - G 88 -3.6 -5.49569 | overlap 813776 CAGCAATATAAAAAA GCCA TGCC CGGC AGCAGTGAAAAATAA Atu8191 814465 - 814088 - | hypothetical protein Atu8192 814749 - 814477 - | hypothetical protein TERM 823 814655 - 814681 + g 71 -6.7 -4.18161 | gap 1 TCGCCCGTCTCCCTT TGCCGCTCGATA CGCA TATCGA-TGGCA TTTTCGAGATTTGTG TERM 824 814948 - 814976 + H 81 -8.1 -4.25681 | TCTAAACGATTTTTA TCCTCGGGCGA ACCGCAA TTGCCCGTGGA TTTATTGACTTGCCT tktA 815073 - 817055 + | transketolase gapA 817118 - 818128 + | glyceraldehyde 3-phosphate dehydrogenase TERM 825 818178 - 818151 - f 71 -11.2 -2.97667 | opp_overlap 818153, overlap 818148 GCATCGATCAAAGCA GGTCCGGCGGGA GCAA TCCCGCCGGATT TTTTATTCTCGATTT TERM 826 818153 - 818176 + F 100 -18.2 -5.56673 | opp_overlap 818151 818148 ATCGATCAAAGCAGG TCCGGCGGGA GCAA TCCCGCCGGA TTTTTTATTCTCGAT TERM 827 820168 - 820179 + G 71 -5.8 -4.30034 | overlap 820175 CTGTCGAACCCGCCA TCGG CCTG CCGA TTTTCATCAGCTTTT Atu3738 818445 - 820310 + | potassium/proton antiporter pgk 820378 - 821580 + | phosphoglycerate kinase TERM 828 821602 - 821634 + F 100 -20.7 -5.1675 | opp_overlap 821605, overlap 821605 CTTACTTGCCTGACA AAAGGCCGGACAAGC GAT GCTTGTCCGGCCTTG TTTTTTGGTAAGTGG TERM 829 821631 - 821605 - f 100 -22.4 -4.37092 | opp_overlap 821605 821602 ACTTGCCTGACAAAA GGCCGGACAAGC GAT GCTTGTCCGGCC TTGTTTTTTGGTAAG TERM 830 821605 - 821631 + F 100 -22.4 -4.67552 | opp_overlap 821605, overlap 821602 ACTTGCCTGACAAAA GGCCGGACAAGC GAT GCTTGTCCGGCC TTGTTTTTTGGTAAG TERM 831 821666 - 821698 + F 71 -12.3 -2.53876 | opp_overlap 821664 821672, overlap 821665 821672 ACCGGGAGGAAAAGT TTCAAACGATTGAAA TCA TTTCAATCGTTTCAA TGAGTTAGCGTGCCA TERM 832 821672 - 821692 + F 79 -11.3 -3.68619 | opp_overlap 821664 821672, overlap 821665 821666 AGGAAAAGTTTCAAA CGATTGAAA TCA TTTCAATCG TTTCAATGAGTTAGC TERM 833 821692 - 821672 - f 79 -11.3 -3.67068 | opp_overlap 821665 821672 821666, overlap 821664 AGGAAAAGTTTCAAA CGATTGAAA TCA TTTCAATCG TTTCAATGAGTTAGC Atu3740 821772 - 822797 + | fructose bisphosphate aldolase TERM 834 822830 - 822847 + F 100 -14.1 -5.27335 | opp_overlap 822830 AATTGTGCAATTGAA GCCGCCC CGAT GGGCGGC TTTTTCTTTACGGCC TERM 835 822847 - 822830 - f 95 -14.1 -3.17571 | opp_overlap 822830 AATTGTGCAATTGAA GCCGCCC CGAT GGGCGGC TTTTTCTTTACGGCC Atu3741 823147 - 824436 + | MFS permease TERM 836 824839 - 824856 + F 100 -12.7 -5.42259 | CCTGTTTTACCTTGA GAGCCGC TTTC GCGGCTC TTTTTTTGCCGGTCG Atu3742 825027 - 825542 + | hypothetical protein TERM 837 825592 - 825575 - T 77 -8.4 -4.15565 | opp_overlap 825575 CGGACGATTTGAAAA GCAGGC TCACCG GCCTGC TTTTTTGTTTTGGCC TERM 838 825575 - 825592 + T 100 -9.1 -5.79595 | opp_overlap 825575 CGGACGATTTGAAAA GCAGGCT CACC GGCCTGC TTTTTTGTTTTGGCC TERM 839 825651 - 825667 + T 100 -13.7 -5.41143 | opp_overlap 825651 GCAGGCAACAAAAAA GCCCGGT AAA ACCGGGC TTTTTTTAAACAATC TERM 840 825667 - 825651 - T 100 -13.7 -5.4833 | opp_overlap 825651 GCAGGCAACAAAAAA GCCCGGT AAA ACCGGGC TTTTTTTAAACAATC rpmE 825917 - 825696 - | 50S ribosomal protein L31 TERM 841 826019 - 825988 - H 88 -11.6 -4.18488 | opp_overlap 825996, overlap 825989 AGCCATTTCAATAAA TGAAGCCATAGACC AGAT GGGCTATGGCTTCC CAATTCGATGCGGAG TERM 842 826018 - 825989 - H 91 -15.1 -3.10611 | opp_overlap 825996, overlap 825988 GCCATTTCAATAAAT GAAGCCATAGACC AGAT GGGCTATGGCTTC CCAATTCGATGCGGA Atu3744 826179 - 827978 + | ABC transporter, nucleotide binding/ATPase protein Atu3745 829724 - 828081 - | putative FAD-binding dehydrogenase TERM 843 829598 - 829572 - G 72 -2.8 -4.75372 | overlap 829574 ACTATCGACGAAAAA CAGCCCGCCCAG CGA CCAGAAGGCCTG GCCTCCGAGATTTTG motB 830598 - 829813 - | hypothetical protein Atu3747 831869 - 830847 - | hypothetical protein TERM 844 832027 - 832004 - R 100 -16 -4.69549 | AACGGAAAACGAAAA CGCCCGGCGA AAAT TCACCGGGCG TCTAAAACTTGCTGA TERM 845 832062 - 832046 - R 80 -9.4 -4.10855 | opp_overlap 832035 AAAACTTGCTGAAAA CGGCAG GTTAT CTGCCG AAAATGCATCAGCGA suhB 832871 - 832071 - | extragenic suppressor protein SuhB enhC 834147 - 833035 - | enhanced entry protein TERM 846 834148 - 834164 + r 72 -3.6 -4.72272 | opp_overlap 834148, overlap 834149 CATCGCCTGTATCAA CCGCCA AACCG TGGCGC TTTTTCGTCAAGCAA thiE 834797 - 834144 - | thiamine-phosphate pyrophosphorylase Atu3751 834902 - 835666 + | hypothetical protein TERM 847 835711 - 835682 - T 100 -9.3 -5.06816 | opp_overlap 835684 ACCCGGCAATAAAAA GCTCTGGCAGC AGGTTTTA GCCACCAGAGC TCAAAAGGCTCAGAC TERM 848 835764 - 835718 - T 77 -8 -4.17657 | gap 2, overlap 835719 CACCAGAGCTCAAAA GGCTCAGACCGCCGGCACTTCA TTTGT CG-AGGGCCGGCGATCTG-GCA TAAATCAATGTCTCG TERM 849 835763 - 835719 - T 72 -11.5 -3.10112 | gap 2, overlap 835718 ACCAGAGCTCAAAAG GCTCAGACCGCCGGCACTTCA TTTGT CG-AGGGCCGGCGATCTG-GC ATAAATCAATGTCTC Atu3752 835945 - 835769 - | hypothetical protein Atu3753 836179 - 836382 + | hypothetical protein purE 836397 - 836897 + | phosphoribosylaminoimidazole carboxylase catalytic subunit purK 836909 - 837985 + | phosphoribosylaminoimidazole carboxylase ATPase subunit TERM 850 838079 - 838058 - f 77 -7.2 -4.27316 | opp_overlap 838060, overlap 838060 CCTGCCAACCGAAAA GAGCGCGC CCCGTT GCGCGCTT TTGATTGTTTGAATA TERM 851 838060 - 838077 + F 91 -9.8 -4.62203 | opp_overlap 838058 838060 TGCCAACCGAAAAGA GCGCGC CCCGTT GCGCGC TTTTGATTGTTTGAA TERM 852 838077 - 838060 - f 74 -9.8 -3.7398 | opp_overlap 838060, overlap 838058 TGCCAACCGAAAAGA GCGCGC CCCGTT GCGCGC TTTTGATTGTTTGAA rpmJ 838132 - 838257 + | 50S ribosomal protein L36 TERM 853 838325 - 838372 + F 75 -5.9 -4.57837 | gap 3, overlap 838330 GCAGAAGTTTGCATT TGATATTGGGCGCAGCCGGGTTAA GCT TTAACTCA--TGCGCCCAA-ATCA TTTTTGCACGACTAT TERM 854 838553 - 838539 - g 85 -5.6 -5.02074 | overlap 838542 GCATCGCTGAAAAAA GAGCGC AAC GCGGTC AAGGCGCGCAGCATC Atu3757 838359 - 838979 + | hypothetical protein TERM 855 839031 - 838994 - T 95 -14.3 -3.18446 | opp_overlap 839004, overlap 838998 839004 AATCTGATAAAAGCA CAAACAAAAATCGCCGC AAAA GCGGCGATTTTTCATTG AGGCATTTTCAGCCG TERM 856 839027 - 838998 - T 100 -13.7 -4.2408 | opp_overlap 839004, overlap 838994 839004 TGATAAAAGCACAAA CAAAAATCGCCGC AAAA GCGGCGATTTTTC ATTGAGGCATTTTCA TERM 857 839004 - 839021 + T 100 -12.7 -4.8622 | opp_overlap 838998 838994 839004 AAGCACAAACAAAAA TCGCCGC AAAA GCGGCGA TTTTTCATTGAGGCA TERM 858 839021 - 839004 - T 100 -12.7 -5.4182 | opp_overlap 839004, overlap 838998 838994 AAGCACAAACAAAAA TCGCCGC AAAA GCGGCGA TTTTTCATTGAGGCA Atu3758 839305 - 839048 - | hypothetical protein Atu3759 839759 - 839454 - | hypothetical protein Atu3760 840563 - 839775 - | hypothetical protein TERM 859 840078 - 840100 + g 100 -12.7 -4.41348 | gap 1, opp_overlap 840077 GGTATCCCACAGGAC CGCCGCGTGC CATG GC-CGCGGCG TTTCTTTCCAGAACG TERM 860 841189 - 841203 + G 73 -10 -3.59979 | opp_overlap 841184 841174 CGGGCAGACAGGGCA GCTGGA TGG TCCAGC TTTCCGATACGCCAG Atu3761 840702 - 841241 + | hypothetical protein pykA 841241 - 842680 + | pyruvate kinase TERM 861 842739 - 842691 - T 95 -14.8 -3.65996 | gap 1, opp_overlap 842694 842695 842706 842732, overlap 842695 842696 842706 TCTGATAGACAAATA TCAAG-CAACAAAAAACCCGCCG TCAC CGGCGGGTTTTTTGTTGGCCTTT CGGCCGTCTGATAAA TERM 862 842694 - 842736 + T 100 -18.7 -3.56821 | gap 1, opp_overlap 842691 842695 842696 842706, overlap 842695 842706 842732 GATAGACAAATATCA AG-CAACAAAAAACCCGCCG TCAC CGGCGGGTTTTTTGTTGGCC TTTCGGCCGTCTGAT TERM 863 842695 - 842735 + T 100 -22.2 -2.73771 | gap 1, opp_overlap 842691 842695 842696 842706, overlap 842694 842706 842732 ATAGACAAATATCAA G-CAACAAAAAACCCGCCG TCAC CGGCGGGTTTTTTGTTGGC CTTTCGGCCGTCTGA TERM 864 842734 - 842695 - T 100 -22.4 -3.53125 | opp_overlap 842695 842694 842706 842732, overlap 842691 842696 842706 ATAGACAAATATCAA GCAACAAAAAACCCGCCG TCAC CGGCGGGTTTTTTGTTGG CCTTTCGGCCGTCTG TERM 865 842733 - 842696 - T 100 -25.9 -2.7079 | opp_overlap 842695 842694 842706 842732, overlap 842695 842691 842706 TAGACAAATATCAAG CAACAAAAAACCCGCCG TCAC CGGCGGGTTTTTTGTTG GCCTTTCGGCCGTCT TERM 866 842723 - 842706 - T 100 -14.1 -5.5604 | opp_overlap 842695 842694 842706, overlap 842696 842695 842691 TCAAGCAACAAAAAA CCCGCCG TCAC CGGCGGG TTTTTTGTTGGCCTT TERM 867 842706 - 842723 + T 100 -14.1 -5.4756 | opp_overlap 842706 842696 842695 842691, overlap 842695 842694 TCAAGCAACAAAAAA CCCGCCG TCAC CGGCGGG TTTTTTGTTGGCCTT Atu3763 844524 - 842761 - | hypothetical protein TERM 868 844171 - 844187 + g 81 -4.4 -5.00616 | gap 1, opp_overlap 844164 AAAATCCATGGCCTT GCCGAGC ATAT GCT-GGC TTTTTTCCGCGACAC TERM 869 844336 - 844317 - G 71 -6.3 -4.31043 | opp_overlap 844329 AGACAAGATCGAAAA GTCGCGG GTCCAT CCGCGTC GGCTGGTTGCGGCGC Atu3764 846383 - 844842 - | sigma 54 dependent transcriptional activator TERM 870 846099 - 846088 - G 78 -7.2 -4.59376 | overlap 846089 ACGACGAAATCAAAA GCGC CGGC GCGC ATGGCCTGCACAACG TERM 871 846392 - 846402 + H 71 -8.2 -3.88559 | overlap 846401 CGGTCATTTTTAGCT CCGG TTT CCGG TTTATGGACCTGCTT pepF 846553 - 848403 + | oligoendopeptidase F Atu3766 848503 - 849138 + | hypothetical protein TERM 872 849138 - 849167 + T 80 -5.5 -4.8622 | opp_overlap 849140 849155, overlap 849139 849140 AGCGGAACTGATTTA AACCGTGACCGCC AGAA GCCGGTCGCGGCC TTTTTCCTTGGCCGC TERM 873 849140 - 849165 + T 75 -12.5 -2.70268 | opp_overlap 849140 849155, overlap 849139 849138 CGGAACTGATTTAAA CCGTGACCGCC AGAA GCCGGTCGCGG CCTTTTTCCTTGGCC TERM 874 849165 - 849140 - T 76 -10.3 -3.68619 | opp_overlap 849140 849139 849138, overlap 849155 CGGAACTGATTTAAA CCGTGACCGCC AGAA GCCGGTCGCGG CCTTTTTCCTTGGCC Atu3767 850043 - 849135 - | GGDEF family protein TERM 875 849546 - 849531 - G 71 -5.4 -4.35524 | gap 1, overlap 849532 CGTGCAAAGGCAAAA GGGCGCT TCA AGC-CCC TTGGAAACCTGTTCC Atu3768 850303 - 851748 + | homospermidine synthase Atu3769 851898 - 852272 + | outer membrane lipoprotein TERM 876 852326 - 852308 - f 77 -11.6 -3.54741 | opp_overlap 852308 GATGACCTTCTGAAA CGCGCGCC TCC GGCGTGCG TTTTTCTTTATTGCG TERM 877 852308 - 852326 + F 100 -13.8 -5.47159 | opp_overlap 852308 GATGACCTTCTGAAA CGCGCGCC TCC GGCGTGCG TTTTTCTTTATTGCG TERM 878 852701 - 852661 - g 74 -3.2 -4.76892 | gap 2, overlap 852662 852665 AGAGGAAGGCAAAAA CGAGTGC-TTCGGC-GGCGC CGC GCGCCTGCTGACCGCAATCA ACCAGACGCGTGACG TERM 879 853044 - 853011 - g 74 -7.3 -4.36914 | overlap 853012 TCGGCGGCCAGAAAA TCGGCATCGTCGGCG CCGT CGCCAACGACACGGC GGAACTGGCAACACC Atu3770 852488 - 854398 + | 5'-nucleotidase TERM 880 854463 - 854441 - f 80 -11.9 -3.37198 | opp_overlap 854441, overlap 854439 GCCGCACACATAACA CCGGCTCCG GACAA CGGGGCCGG TTTCTTATTTTCCCT TERM 881 854441 - 854463 + F 100 -14.1 -4.68601 | opp_overlap 854441 854439 GCCGCACACATAACA CCGGCTCCG GACAA CGGGGCCGG TTTCTTATTTTCCCT TERM 882 854530 - 854518 - f 70 -9.1 -3.64488 | overlap 854516 854520 AATTTTGCCAAAAGA CAGCC TGC GGCTG CGCCGGCCCCGGAAA TERM 883 855469 - 855449 - g 82 -9.6 -4.38712 | GCCATTGCCAGAAAA CCGCCCGC CTGCT GCGGGAGG CTCTGGGGCGGACCG hemH 854749 - 855783 + | ferrochelatase TERM 884 856458 - 856405 - g 78 -7.1 -4.59773 | overlap 856390 856428 GCGGAGCGCGAAAAA CGCGCACAGGTGCTGGAAGCAGAGG GCGC CCGCAACGCCCAGATTCTGCGCGCG GAAGGTGCAAAACAA Atu3772 855841 - 856890 + | hypothetical protein TERM 885 857021 - 857036 + G 74 -3.9 -4.82901 | overlap 857033 TGCCGCACTTGTCAT CGGCG TGGTTT CGCTG TTTTTCTGGGAAGCG Atu3773 856893 - 857357 + | hypothetical protein kpsF 858426 - 857431 - | capsule expression protein Atu3775 858851 - 858486 - | hypothetical protein TERM 886 858831 - 858820 - G 84 -3.6 -5.29445 | TCCCAACAATAAAAA CCGA CTTT CCGG ATGTTCAAAACGCGA Atu3776 858890 - 859264 + | hypothetical protein TERM 887 859304 - 859343 + G 89 -6.5 -5.0538 | opp_overlap 859316, overlap 859305 GCCACACGTCTGCCG ACGTCGC-GGAAAGCAGCA ACCC TGCTGCTTGCCTGC-ACGA TTTTTTACCCTCACG TERM 888 859305 - 859342 + G 73 -10 -3.62746 | opp_overlap 859316, overlap 859304 CCACACGTCTGCCGA CGTCGC-GGAAAGCAGCA ACCC TGCTGCTTGCCTGC-ACG ATTTTTTACCCTCAC Atu3777 859271 - 860764 + | hypothetical protein TERM 889 860802 - 860783 - T 100 -10.7 -5.45802 | opp_overlap 860783 GCCCCAAAACAAAAA TCCCGGC GCGAAG GCCGGGA TTTCCTTGTGTATTC TERM 890 860783 - 860802 + T 86 -10.7 -4.07968 | opp_overlap 860783 GCCCCAAAACAAAAA TCCCGGC GCGAAG GCCGGGA TTTCCTTGTGTATTC galU 861712 - 860825 - | UTP-glucose-1-phosphate uridylyltransferase TERM 891 861680 - 861693 + g 75 -2.3 -4.92791 | opp_overlap 861680, overlap 861674 861675 ACCTGCGACCGGAAA TACGG CCTT CCGAA TTTTCTTCTGTTCTA TERM 892 861757 - 861781 + H 88 -9.5 -4.37886 | overlap 861758 ACAATCCCCGCACAC TGTTGTTATTT CAA AAATAACAACG TTTTGTAAAGGGTGA TERM 893 861758 - 861780 + H 71 -10.8 -3.2241 | overlap 861757 CAATCCCCGCACACT GTTGTTATTT CAA AAATAACAAC GTTTTGTAAAGGGTG mltB 861908 - 863128 + | lytic murein transglycosylase Atu3780 863192 - 864427 + | hypothetical protein Atu3781 864679 - 865353 + | two component response regulator Atu3782 865350 - 866705 + | two component sensor kinase TERM 894 866729 - 866752 + T 86 -12.4 -3.8822 | opp_overlap 866729 CAGTCAAACAAAAAA GGCCTGTCGC GTCT GCAACAGGCC TTTCCGTTTCCTATC TERM 895 866752 - 866729 - T 100 -14.6 -5.65927 | opp_overlap 866729 CAGTCAAACAAAAAA GGCCTGTCGC GTCT GCAACAGGCC TTTCCGTTTCCTATC gltD 868234 - 866780 - | glutamate synthase subunit beta TERM 896 867492 - 867480 - G 71 -5.5 -4.29432 | opp_overlap 867487, overlap 867469 867481 TAAACGCCATTAAAA TCGGC GCC ACCGA TGCCGGCCGGGCGCG TERM 897 868347 - 868372 + r 83 -12.5 -3.21276 | overlap 868344 TCGCCGCTCGTCCAG GTGACCGCCGT GGGA ACGGCGGCCGC TGTTATCAGCGAGAC gltB 873162 - 868417 - | glutamate synthase large subunit TERM 898 870639 - 870696 + g 74 -12.1 -3.15197 | gap 1, opp_overlap 870666 GATAGGCATATTCGC CGCCGATATCGAGCGTATTGGCAAGGAT CGG ATCCTTGCCGAAAGCCGCGGTAT-GGCG TGTTACGGTTTCTTC TERM 899 872127 - 872149 + g 72 -11.2 -3.28712 | opp_overlap 872124 872123 CCATGGAATAACCGC CGCGCACGAG GAA TTCGAGCGCG TTGTCGAAACAGGCG TERM 900 873677 - 873690 + G 100 -3.7 -5.93809 | opp_overlap 873671 873670, overlap 873678 CAACGAAATCTTCGA ACGCG AAGT CGCGG TTTTTTTTGTCGCCA TERM 901 873678 - 873689 + G 71 -7.2 -4.15201 | opp_overlap 873671 873670, overlap 873677 AACGAAATCTTCGAA CGCG AAGT CGCG GTTTTTTTTGTCGCC ald 873534 - 874586 + | threonine aldolase TERM 902 874626 - 874590 - T 71 -10.7 -3.28712 | overlap 874591 874593 874624 GCTGCCGTCTGACAA CGATCGGAGGGCGTCGC CTT GCGGCGCCCTCAAACCT CCTGCAGGCGGTAAC TERM 903 874625 - 874591 - T 81 -14.2 -2.57132 | overlap 874590 874593 874624 CTGCCGTCTGACAAC GATCGGAGGGCGTCGC CTT GCGGCGCCCTCAAACC TCCTGCAGGCGGTAA TERM 904 874623 - 874593 - T 79 -13.2 -2.82623 | overlap 874591 874590 GCCGTCTGACAACGA TCGGAGGGCGTCGC CTT GCGGCGCCCTCAAA CCTCCTGCAGGCGGT kdpE 875308 - 874619 - | two component response regulator TERM 905 874898 - 874916 + g 72 -11 -3.33087 | opp_overlap 874897 874894 ATCGACCGAAAGATC GCCGGTCT GGA AGACTGGC TTCTCGCCCTGTGTT kdpD 878071 - 875369 - | two component sensor kinase TERM 906 876185 - 876169 - G 72 -2.2 -4.77157 | CCAACGCATCAAAAA GCCG CTGCTGTTC CGGC GTCAAAAGCGGTCCG TERM 907 876388 - 876401 + g 76 -9.5 -4.09685 | opp_overlap 876379 GATAACCCGCCTTGA CGGCG ATGG CGCCG TTTTCCGGCATGAGC TERM 908 878089 - 878118 + r 100 -15.1 -3.89215 | overlap 878090 AACCACCAGTGGTCG AGGCTATGGCTTC CGAA GAAGCCATAGCCA TTTCAGTTTATGAGC TERM 909 878090 - 878117 + r 100 -18.6 -2.93047 | overlap 878089 ACCACCAGTGGTCGA GGCTATGGCTTC CGAA GAAGCCATAGCC ATTTCAGTTTATGAG kdpC 878692 - 878126 - | potassium-transporting ATPase C chain kdpB 880789 - 878705 - | potassium-transporting ATPase subunit B TERM 910 879703 - 879715 + g 74 -3.3 -4.8622 | TCTGCATATCCCGGG CACGG ATT CCGTA TTTTTCCTTGGCCAG TERM 911 880926 - 880949 + r 71 -9.5 -3.53012 | overlap 880915 CCAGCCGCCGGGCGT GGCGCTCCC TTCAAC GGCAGCGCC TTTGCGGGCGGGAAC kdpA 882710 - 881007 - | potassium-transporting ATPase subunit A TERM 912 883065 - 883104 + r 82 -11.5 -3.91897 | opp_overlap 883069 883074, overlap 883068 883069 883074 TCTGGGAGCCGGACA GGAAGAAAAGCGCCGTC ATGTGG GACGCCGCTTTTCATTC TTTCTGGCTGAGAAG TERM 913 883068 - 883101 + r 83 -9.6 -4.09117 | opp_overlap 883069 883074, overlap 883065 883069 883074 GGGAGCCGGACAGGA AGAAAAGCGCCGTC ATGTGG GACGCCGCTTTTCA TTCTTTCTGGCTGAG TERM 914 883100 - 883069 - R 83 -13.1 -3.26471 | opp_overlap 883068 883065 883069 883074, overlap 883074 GGAGCCGGACAGGAA GAAAAGCGCCGTC ATGTGG GACGCCGCTTTTC ATTCTTTCTGGCTGA TERM 915 883069 - 883100 + r 81 -13.1 -3.04988 | opp_overlap 883069 883074, overlap 883068 883065 883074 GGAGCCGGACAGGAA GAAAAGCGCCGTC ATGTGG GACGCCGCTTTTC ATTCTTTCTGGCTGA TERM 916 883095 - 883074 - R 86 -7.2 -4.75472 | opp_overlap 883069 883068 883065 883074, overlap 883069 CGGACAGGAAGAAAA GCGCCGTC ATGTGG GACGCCGC TTTTCATTCTTTCTG TERM 917 883074 - 883095 + r 83 -7.2 -4.64613 | opp_overlap 883074 883069, overlap 883069 883068 883065 CGGACAGGAAGAAAA GCGCCGTC ATGTGG GACGCCGC TTTTCATTCTTTCTG ansA 884216 - 883263 - | L-asparaginase ansP 885670 - 884213 - | L-asparagine permease TERM 918 885138 - 885127 - G 71 -5.8 -4.33105 | CAACGACGAGGAAAA TGGC GAGA GCCA GAACCTTGATCAGGC TERM 919 885484 - 885474 - G 88 -2.4 -5.59564 | AGAAACGCAAAAAAA CCGC AGA GCGC ATAAACGAAAACCAG TERM 920 885520 - 885496 - G 73 -4.8 -4.61873 | overlap 885499 GCGCATAAACGAAAA CCAGCGCCGG GCCTG CCTGCGCGAG ACGCCCACCGGCACC TERM 921 885643 - 885654 + g 78 -7.2 -4.58395 | CGAAGACCTCACGTT CGGC GGGT GCCG TTTTTCCAGAATGCA aspA 885929 - 887374 + | aspartate ammonia-lyase Atu3794 888059 - 887343 - | FadR family transcriptional regulator Atu3795 891340 - 888269 - | AcrB/AcrD/AcrF family protein Atu3796 892422 - 891337 - | efflux protein Atu3797 893498 - 892422 - | HlyD family secretion protein Atu3798 893804 - 894418 + | TetR family transcriptional regulator hutC 895437 - 894454 - | GntR family transcriptional regulator proX 895721 - 896758 + | ABC transporter, substrate binding protein (proline/glycine betaine) TERM 922 896767 - 896790 + F 100 -15.2 -4.13767 | overlap 896768 TAAGTAATGTTGGCA GGCGCGCCGG GCTT CCGGCGCGCA TTTTCCCGTCAGGAC TERM 923 896768 - 896789 + F 100 -18.7 -3.08046 | overlap 896767 AAGTAATGTTGGCAG GCGCGCCGG GCTT CCGGCGCGC ATTTTCCCGTCAGGA TERM 924 896987 - 897016 + G 77 -3.3 -5.00846 | overlap 896988 897012 TCCTCTTCGTGGAAT GGGCTCTGCGCGG ACTG CCGTGGTGGGCCA TTTTTCTGGTCTTTC proW 896854 - 897711 + | ABC transporter, membrane spanning protein (proline/glycine betaine) proV 897704 - 898537 + | ABC transporter, nucleotide binding/ATPase protein (proline/glycine betaine) TERM 925 900051 - 900006 - g 72 -11.9 -3.37283 | gap 1, opp_overlap 900005 900004, overlap 900022 GAAATGCTGCAAAGA GCGGATGCGATTGAAAGCCTTC CCT GAAGGCGACCA-TCGCATCCTC GATCTTTCGCTGAAT hutH 898530 - 900032 + | histidine ammonia-lyase TERM 926 900036 - 900022 - f 74 -10 -3.65902 | opp_overlap 900005 900004, overlap 900006 CGGATGCGATTGAAA GCCTTC CCT GAAGGC GACCATCGCATCCTC TERM 927 900205 - 900193 - f 86 -7.7 -4.72272 | opp_overlap 900192 GTCCCTGACGAAAAA TGTGC GCT GCACA AATTTCGGAGGAATA TERM 928 900528 - 900542 + G 72 -12.8 -3.02461 | CCACGGCCTCGGTAG GCGCCG TGA CGGCGC TGTTCAGCAACGTTC Atu3804 900299 - 901507 + | permease TERM 929 901601 - 901547 - f 100 -39 -3.31501 | opp_overlap 901593, overlap 901538 901579 ATGAACGGTGTAGAA CGCCTGCCGTGATGGCGCGAGAAT TCAGGAT ATTCTCGCGCCATCACGGCAGGCG AACGACATTCTATCG TERM 930 901810 - 901825 + G 76 -6.8 -4.56597 | GAACTGCTGTCCAGC GTCGTG TTGA CACGGC TTTTTCCGCAGGCCC TERM 931 902462 - 902486 + G 80 -9.9 -4.13767 | opp_overlap 902448 ACGACTGGTGCCTTA CCGGCATCCGC CGC GCGGATGAAGG TTTTGAACTGCGAGC myg1 901747 - 902694 + | hypothetical protein TERM 932 902713 - 902750 + T 81 -12 -3.56099 | opp_overlap 902713 TGTGCACAGGCTAAA CGGTTGCCGTCCGGTT CTTTTC AGGCGGATGGCGACCG TTTCACACCCTTATG mdeA 904071 - 902788 - | methionine gamma-lyase lrp 904195 - 904653 + | AsnC family transcriptional regulator Atu3808 905626 - 904721 - | LysR family transcriptional regulator TERM 933 906026 - 906014 - g 73 -9.1 -3.87815 | TCTGATCGTCACAAA GGTCG GTG CGACC CGTGGTGAGGATGCC Atu3809 905751 - 906617 + | putative oxidoreductase Atu3810 907620 - 906727 - | LysR family transcriptional regulator Atu3811 907774 - 908418 + | hydrolase Atu3812 909008 - 908601 - | hypothetical protein fabG 909271 - 910017 + | 3-oxoacyl-(acyl-carrier protein) reductase Atu3814 910028 - 910357 + | hypothetical protein Atu3815 911046 - 910387 - | GntR family transcriptional regulator TERM 934 911171 - 911159 - R 78 -6.2 -4.72272 | opp_overlap 911168 GTCTCCCATCAAAAA CCGG ACTCA CCGG TAAAAATTTCTTTAG fdh 912375 - 911329 - | D-threo-aldose 1-dehydrogenase TERM 935 911355 - 911368 + g 74 -3.7 -4.82901 | opp_overlap 911346 TCAAAACCGGCATCG GCGCC AGCA GGCCC TTTTTCTGCAAGGCC TERM 936 911870 - 911887 + g 77 -8.4 -4.42806 | opp_overlap 911858 CCACCCGACGTCAAT TGCCGC CAGAGC GCGGCA TTTCTTTCACCATGG TERM 937 912043 - 912010 - G 73 -9.5 -3.91352 | opp_overlap 912041 ATAGCTGTAATCAAA GGTCTCGCGAAACGG TAGC CCGTTTTGCCAGCCC GGATCCAACGGGTTT TERM 938 912041 - 912055 + g 70 -4.2 -4.57569 | opp_overlap 912010 AGCCCGTTTTGCCAG CCCG GATCCAA CGGG TTTTTCGGCGGCTCC TERM 939 912194 - 912166 - G 84 -9.5 -4.56597 | overlap 912167 TTCTTCGCGCAAAAA CTGCCCGAGCAGA TGC TCCGCCCGGGTAA GACCGTACATCGGCG TERM 940 913778 - 913763 - g 73 -4.6 -4.58663 | overlap 913764 ACCATTCTCGAAAAA TCGCTG GGAG CGGCGA TGAAGGGCGGCTCGA Atu3817 912674 - 914185 + | dehydratase TERM 941 915165 - 915215 + G 84 -9.8 -4.14392 | gap 3, opp_overlap 915163 GGTCAGGCGAAATTC TCGGCCTGACCGGCCT-GGT-CGGC GCCG GCCGCACCGAGGTCGCCCAGGC-GA TTTTCGGCCTTGCGC TERM 942 915269 - 915259 - g 71 -8.2 -4.07124 | CAGGATCGAGATAAA CGGC AAG GCCG TTACGATTGGTTCAC rbsA 914315 - 915814 + | ABC transporter, nucleotide binding/ATPase protein (ribose) rbsC 915811 - 916809 + | ABC transporter, membrane spanning protein (ribose) rbsC 916806 - 917771 + | ABC transporter, membrane spanning protein (ribose) rbsB 917805 - 918734 + | ABC transporter, substrate binding protein (ribose) TERM 943 918759 - 918723 - f 76 -3 -5.0925 | gap 2, overlap 918755 GTGGAAAAGGAAAAA CCCGCCTTCTGAACGATG CAA CA-CGGACAAAAG-CGGG CGTCACGCGCCAGCA TERM 944 918773 - 918755 - f 79 -7.3 -4.4727 | overlap 918723 GCAACACGGACAAAA GCGGGCG TCACG CGCCAGC ATGTAAAGCAGGCCG TERM 945 918812 - 918784 - f 75 -11.7 -2.95116 | opp_overlap 918785, overlap 918781 CCAGCATGTAAAGCA GGCCGCGCAAC TATCTGG GTTGCGCGGCT TATTCCATCGTCATC TERM 946 918785 - 918811 + F 100 -15.9 -3.69663 | opp_overlap 918784 918781 CAGCATGTAAAGCAG GCCGCGCAACT ATCTG GGTTGCGCGGC TTATTCCATCGTCAT Atu3822 918863 - 919348 + | hypothetical protein TERM 947 919391 - 919375 - T 73 -8.7 -3.79747 | opp_overlap 919374 TTAGCCAGCACTAAA CCGAAAG CTC CCTTCGG ATGATTTCCGCCCCT metE 920398 - 919370 - | 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase Atu3824 921407 - 920424 - | hypothetical protein TERM 948 922052 - 922037 - g 76 -5.4 -4.614 | gap 1 CGCAACGATAGAAAA GCC-TGC TCA GCACGGC GCGACAACCCGTCTC Atu3826 922011 - 922841 + | acyl-CoA hydrolase Atu3827 922844 - 923731 + | LysR family transcriptional regulator Atu3828 923782 - 924360 + | acetyltransferase Atu3829 925278 - 924427 - | LysR family transcriptional regulator TERM 949 925096 - 925072 - G 74 -6.3 -4.56597 | overlap 925094 CGCGGGTTCCAAAAA GCGTTCGCCTG CTG CCGTCAAACGC ACGCGGCGCGGAGTC Atu3830 925369 - 926625 + | MFS permease TERM 950 927759 - 927775 + G 71 -8.7 -3.75378 | GGATGAAGGCGGCTC GGGAGCA TCG TGTTCCC TTGTCTTCTCGCACT int 926945 - 928135 + | phage-related integrase Atu3832 928343 - 929884 + | hypothetical protein Atu3833 930587 - 930048 - | hypothetical protein Atu3834 931295 - 930600 - | hypothetical protein TERM 951 930959 - 930973 + g 85 -9.2 -4.61747 | TCTCTTCGCCCACAC CGGCGT AAG GCGCCG TTTTCTGCTTATTGG Atu3835 932067 - 931282 - | hypothetical protein TERM 952 931693 - 931705 + g 76 -6.3 -4.63218 | CATTAAGTTTACTGC GCTAA CCA TTAGC TTTTCTTGCGCAGAG Atu3836 932936 - 932358 - | hypothetical protein Atu3837 933235 - 932981 - | hypothetical protein Atu3838 933743 - 933309 - | hypothetical protein TERM 953 934389 - 934401 + rH 74 -4.8 -4.72272 | CATTACCTAAAGATC GTGC TCGAT GCAC TTTTTGGTCCGCGCA TERM 954 935085 - 935107 + rH 95 -12.8 -4.07568 | GGGGTTATTGATTAT TCTCTCGGAG GCA TTCCGAGAGA TTTTGAAAGCGCCGC Atu3840 936048 - 935740 - | hypothetical protein Atu3841 936047 - 936523 + | hypothetical protein Atu3842 937094 - 936504 - | hypothetical protein Atu3843 937437 - 938579 + | hypothetical protein Atu3844 938631 - 939143 + | hypothetical protein Atu3845 939896 - 939216 - | hypothetical protein Atu3846 940357 - 939917 - | hypothetical protein Atu3847 940947 - 940426 - | hypothetical protein Atu3848 941336 - 941629 + | hypothetical protein Atu3849 941783 - 942415 + | resolvase TERM 955 942494 - 942526 + G 81 -13.4 -3.40403 | AACGTTTGCGCCTTT CCGGGCGGCTGG CGTATCTTC CTGGCCGCCCGG TTCTCATCGCGCAGA Atu3850 942412 - 942705 + | hypothetical protein Atu3851 943310 - 943008 - | hypothetical protein TERM 956 943190 - 943141 - G 74 -11.3 -3.53012 | gap 1, opp_overlap 943171, overlap 943143 943161 TCCTGCTTGTCGAAA TAGCCGGCGACGCGGAACAACGTC GCG GAAGCTGTCGCGCG-CGCCGGCGC GGGAGCTTTTACATC TERM 957 943188 - 943143 - G 95 -18.3 -3.34398 | gap 1, opp_overlap 943171, overlap 943141 943161 CTGCTTGTCGAAATA GCCGGCGACGCGGAACAACGTC GCG GAAGCTGTCGCGCG-CGCCGGC GCGGGAGCTTTTACA TERM 958 943171 - 943196 + g 75 -8.2 -4.19817 | opp_overlap 943161 943143 943141 AACAACGTCGCGGAA GCTGTCGCGC GCGCCG GCGCGGGAGC TTTTACATCGCTGCA TERM 959 943356 - 943340 - R 70 -9.3 -3.76775 | TCGAATACATCGAAA CGCGGCG TAG CGCGGCG CTCTAACTCGTCAAT Atu3852 943587 - 943321 - | hypothetical protein TERM 960 943765 - 943783 + G 77 -11 -3.64703 | CTTTGCGCCGCACTG CTTGCGGG TCG TCCGCAAG TTTCGGTGCCAACGG Atu3853 943741 - 943917 + | hypothetical protein TERM 961 943945 - 943986 + T 100 -17.3 -4.07568 | TGGTGGTTCGGGGAC CGGTGGGGTGGTGGGTATA TATA TACCCCCACCGCTCCACCG TTTTGGGCCGGAACG Atu3854 946196 - 944097 - | hypothetical protein TERM 962 944405 - 944438 + g 71 -7.6 -4.03234 | gap 3, opp_overlap 944405 CTGTATGTGATACAA GACGGACGACACACGAT GTT ATCG-G-GTCG-CCGTC TTTGTCTCGGCCAAG TERM 963 944576 - 944596 + g 74 -6.7 -4.41616 | opp_overlap 944575 944578, overlap 944572 944580 944581 CACGCAGGAGGGAAT GACCTCGCG CAC CGCGCGCTC TTTCTTTCCCCGAGT TERM 964 945923 - 945944 + g 73 -10.1 -3.67622 | opp_overlap 945904, overlap 945919 CCCGCAGCTGGCGCG CGATCTCGC GAAG GCGAGAGCG TTCCTTTTCGAAGTG TERM 965 946407 - 946441 + H 83 -12.2 -3.62191 | gap 1, opp_overlap 946406 946405, overlap 946410 CATTTAAGAAAATCT CCAGCCGGCAGCACT GTGACG AGTGC-GCCGGCTCG TTCATTTGGTGTTGT TERM 966 946410 - 946438 + H 79 -12.5 -2.91429 | gap 1, opp_overlap 946406 946405, overlap 946407 TTAAGAAAATCTCCA GCCGGCAGCACT GTGACG AGTGC-GCCGGC TCGTTCATTTGGTGT Atu3856 946422 - 946721 + | hypothetical protein TERM 967 946753 - 946737 - T 80 -4.3 -5.06103 | overlap 946738 946739 AGAACCGCGAAAAAA GCGCCTG TCA CAGGCAA GCAAACGCGGATCAA Atu3857 947562 - 946765 - | hypothetical protein Atu3858 947608 - 947988 + | hypothetical protein Atu3860 950845 - 948602 - | hypothetical protein Atu3861 951403 - 951014 - | acyl-CoA hydrolase Atu3862 951538 - 951771 + | hypothetical protein exsE 953294 - 951813 - | ABC transporter, nucleotide binding/ATPase protein TERM 968 952018 - 952003 - G 71 -9 -3.73402 | opp_overlap 952002 952003 AGACCTTCCAGCAAA TCGTCG ATCA CGACGA ATTTCGGCTTCAAAA Atu3864 953697 - 953425 - | hypothetical protein TERM 969 953897 - 953886 - H 71 -7.2 -3.9398 | GGACAACCGCATAAA CCGG AAAA CCGG GCAAGGCAGATTAAT TERM 970 956541 - 956529 - g 70 -4.7 -4.56597 | overlap 956530 CCGCTTCTGGAAAAA TCCGG CCG CCGGC AAATTCGTGCGCTGG TERM 971 956658 - 956640 - g 71 -6.7 -4.1899 | CGACCTCAGGGAAAA CGGCTTC GACGT GAAACCG GAATGGTTCACAGCC TERM 972 956923 - 956910 - g 71 -5.9 -4.31085 | GACACCAACGGAAAA CCGCA GTGT CGCGG TCGCCGGCGTGCGCT Atu3865 953911 - 957237 + | hypothetical protein TERM 973 958805 - 958785 - g 76 -13.3 -3.04144 | opp_overlap 958773, overlap 958770 958771 GCTTTATCCGCAACA TGCCGGGCA GCC TGCCCAGCA GGGCTGCAGACAATC Atu3866 957239 - 959644 + | hypothetical protein TERM 974 960417 - 960389 - g 84 -10.3 -4.20783 | opp_overlap 960389 960407 ACTCGACCCAACAAA CGATATCGTCGCC GGA AGCGACCACATCG TCGTTGGTTACGGGC Atu3867 959649 - 960527 + | hypothetical protein TERM 975 961025 - 960997 - g 95 -6.7 -5.4505 | overlap 960998 CCGCGGAAGAAAAAA TCGAACTGGAGAA GAA TTCTCCAACCCGT GTCACGACCACGGAA TERM 976 961024 - 960998 - g 78 -10.2 -3.86307 | overlap 960997 CGCGGAAGAAAAAAT CGAACTGGAGAA GAA TTCTCCAACCCG TGTCACGACCACGGA TERM 977 961101 - 961111 + G 74 -6.8 -4.36914 | opp_overlap 961083 CAGATACAGCTGAAT CCGA TGC TCGG TTTTATCGGGGCAAA TERM 978 961607 - 961596 - g 78 -2.2 -5.01732 | AACGCCCTTAAAAAA GCCA ATCC TGAC GAAGCGAGATACCAC Atu3868 960696 - 961934 + | hypothetical protein TERM 979 961973 - 961987 + F 70 -10 -3.42699 | opp_overlap 961986 TCCCCTGATTGTCTG GCTTCG GAG CGAAGC TTGTCCTCCCTGCAT TERM 980 962018 - 961986 - f 100 -16.3 -3.05384 | opp_overlap 961973 TGGCTTCGGAGCGAA GCTTGTCCTCCCTGC ATG GCTGGCAGGACAAGC ACGGCAGGTGACAGC TERM 981 962208 - 962168 - g 71 -8.2 -4.08692 | gap 1, opp_overlap 962168, overlap 962170 962171 CAATCGTGGGGAAAA GATTGGCCTTGTCGGC-CC GAAC GGCGCCGGCAAGACCACGC TGTTCCGGATGATAA TERM 982 962988 - 962972 - g 71 -6.5 -4.27796 | opp_overlap 962975 962978, overlap 962974 CAAGAAACTTGAAAA GATCGAC CGT GTCGAGC CGCCGAAACGGCGCC TERM 983 963446 - 963426 - g 74 -5.3 -4.56597 | opp_overlap 963434 963436, overlap 963428 TCCGGTGGTGAAAAA GCCCGCC TCGTCAT GGCGGCC ATGCTGTTCGATCCG TERM 984 963622 - 963638 + G 80 -10.9 -3.73402 | TGCTCGAACTGACGC CTGATGG TAT CCATCAG TTTGGTGGCGGATAT Atu3869 962082 - 963704 + | ABC transporter, nucleotide binding/ATPase protein TERM 985 964514 - 964557 + G 79 -8.8 -4.14633 | TCTGAAGGACGGCAC GATCGGCTCTCTCGGCATCG ATGT CTATGAAGAGGAAGCCGATC TCTTTTTTGAAGATC ldhA 963765 - 964778 + | D-lactate dehydrogenase TERM 986 965802 - 965772 - g 86 -14 -3.5393 | overlap 965773 ACCAGTTGGCCGAAA TTGTCGATGCGGTC GGC GACCGCATCGACGT GATGATGGACGGCGG TERM 987 965801 - 965773 - g 84 -17.5 -2.72144 | overlap 965772 CCAGTTGGCCGAAAT TGTCGATGCGGTC GGC GACCGCATCGACG TGATGATGGACGGCG lldA 964886 - 966031 + | L-lactate dehydrogenase Atu3872 966405 - 966061 - | hypothetical protein TERM 988 966382 - 966372 - G 71 -8.2 -4.08394 | overlap 966361 ACATGGCGGCCAAAA CCGC GTA GCGG AAAAATCGAGGCGTA TERM 989 966509 - 966497 - H 70 -9.1 -3.69483 | opp_overlap 966496 966495, overlap 966495 ACCTTACTGAAAAGA GCGGT TTC ACCGC CATTGTCAGTGTCCC Atu3873 966601 - 967581 + | hypothetical protein lyxK 969315 - 967837 - | L-xylulose kinase Atu3875 970171 - 969329 - | aldolase glpD 971898 - 970174 - | glycerol-3-phosphate dehydrogenase TERM 990 970829 - 970796 - G 71 -8.2 -4.07687 | gap 2 ATTCTCCCGGTAAAA GCGGCATCACTGCGCG GCAG CGGGC-GT-ATGCCGC TGAAACTAAAGACAA TERM 991 971017 - 971004 - G 82 -9.5 -4.36854 | opp_overlap 971004 GAAAGAGAATACAAA CGCGG TTAT CCGCG TTCTCAAAGAAAATC TERM 992 971647 - 971637 - G 75 -8.2 -4.14392 | GCGCAAGCGTCAAAA GCGC ATC GCGC TCGCGCAGGGATTCC Atu3877 973019 - 972021 - | aldo-keto reductase Atu3878 973951 - 973016 - | transcriptional regulator TERM 993 973093 - 973124 + g 74 -12.2 -3.14132 | gap 1, opp_overlap 973092 973093 GCGAGGTCAGATAAC GGCCGGCCAGCGTGG CCG CCAC-CGGTCCGGCC TTGATGGCGCCAGCC TERM 994 973698 - 973674 - G 76 -10 -3.72695 | opp_overlap 973688 973696 ATTGTCTCCAGTAAA TGGTTCGCCG CCACC CGGCCAACCA TCTGCAAGACGGTTT TERM 995 973798 - 973764 - G 71 -8.5 -4.13767 | gap 1 TGCGTGAGGCCAAAA CGGC-GGCTGATCTCG TTTT CGAGGTCCACCAGCCG CTGATAGGGACTGGC Atu3879 975033 - 974032 - | ABC transporter, membrane spanning protein (sugar) Atu3880 976566 - 975046 - | ABC transporter, nucleotide binding/ATPase protein (sugar) TERM 996 976597 - 976620 + r 100 -15.3 -5.00616 | CTGCTTCCCTCGTGA CCGGCGAGG CCAAAA CCTCGCCGG TTTTTTAAGAGCGAC Atu3881 977652 - 976639 - | ABC transporter, substrate binding protein (sugar) TERM 997 977920 - 977943 + r 95 -9.6 -4.72029 | opp_overlap 977920 CCAGAAACGAAGAAA GGGTTTCCGA TTGC TCAGAAACCC TTTTCTTGAATTCGG TERM 998 977943 - 977920 - R 95 -11.8 -4.42976 | opp_overlap 977920 CCAGAAACGAAGAAA GGGTTTCCGA TTGC TCAGAAACCC TTTTCTTGAATTCGG Atu3883 978478 - 978116 - | chemotaxis response regulator Atu3884 978660 - 979544 + | hypothetical protein TERM 999 979627 - 979612 - f 100 -11.8 -5.75342 | GCCGGGCAAAAAAAA CCGCGC CTGA GCGCGG TCAAGTCTAGGGAGG TERM 1000 980384 - 980365 - g 78 -6.4 -4.63932 | CACCGCGGAAGAAAA GCCCCTTT ATGA AAAGGTGC AGGATCAGGTCCGCC Atu3885 979862 - 980638 + | inositol monophosphatase family protein pldB 981601 - 980660 - | lysophospholipase TERM 1001 981316 - 981329 + g 84 -9.5 -4.57341 | opp_overlap 981305 981297, overlap 981327 AAAAGCGCCGCACAT GCCCG ACGC CGGGC TTTTTCAGGAGCCTT TERM 1002 981706 - 981667 - H 100 -7.8 -5.64421 | gap 1, overlap 981669 981691 AGGTCAAAGAAAAAA TTGCCGGAACCGTCGGTTA AAG CAGTCG-CGGTTCCGGCGA ATAAGACAGAAGAAG TERM 1003 982239 - 982228 - g 83 -2.2 -5.1675 | gap 1 CCACGGACGAAAAAA CGACC GAA GG-CG AATTCCTGTATCGCG hspL 981981 - 982463 + | small heat shock protein TERM 1004 982508 - 982482 - T 77 -7.9 -4.2349 | opp_overlap 982486, overlap 982486 TTCTGACATGTAAAA CGAACGGCCCC TTTAC GGGGCCGTTTT TGTTTGCGGAGATCA TERM 1005 982504 - 982486 - T 86 -13.1 -3.70676 | opp_overlap 982486, overlap 982482 GACATGTAAAACGAA CGGCCCC TTTAC GGGGCCG TTTTTGTTTGCGGAG TERM 1006 982486 - 982504 + T 100 -13.1 -5.27335 | opp_overlap 982486 982482 GACATGTAAAACGAA CGGCCCC TTTAC GGGGCCG TTTTTGTTTGCGGAG Atu3888 983545 - 982526 - | hypothetical protein TERM 1007 983912 - 983901 - g 71 -7.2 -4.18018 | opp_overlap 983903, overlap 983877 GCTGTTCAGCGAAAA CCGC CTGC GCGG ACAGCTGAGGCTTGG TERM 1008 984094 - 984082 - g 70 -10.5 -3.53012 | opp_overlap 984072 GTGGTGCTGGCCAAA CGCCG TCT CGGCG ATAAGCTCGGCCATT Atu3889 983644 - 984504 + | LysR family transcriptional regulator glpK 986010 - 984511 - | glycerol kinase TERM 1009 986037 - 986059 + r 100 -16.2 -4.23104 | opp_overlap 986035 986038 986050, overlap 986038 CTTTCAGACGCAATG ACGGGGCGGC AAA GCCGCCCCGG TTTGTTCAGATTTGA TERM 1010 986038 - 986058 + r 100 -19.7 -3.1314 | opp_overlap 986035 986038 986050, overlap 986037 TTTCAGACGCAATGA CGGGGCGGC AAA GCCGCCCCG GTTTGTTCAGATTTG TERM 1011 986058 - 986038 - R 100 -19.7 -2.77182 | opp_overlap 986038 986037, overlap 986035 986050 TTTCAGACGCAATGA CGGGGCGGC AAA GCCGCCCCG GTTTGTTCAGATTTG Atu3891 987804 - 986083 - | hypothetical protein TERM 1012 986119 - 986131 + g 78 -4.7 -4.72729 | CAGTTCGTCGTAATT GACGG TGA CCGGC TTTTCCTTTTCGTTG TERM 1013 987844 - 987867 + r 100 -7.4 -5.34555 | overlap 987839 987840 TGCATGAAGTCTGCG GGTGCGGT TTTCCTCC GCCGCACC TTTTTTCTGCTCTAG TERM 1014 988019 - 988009 - R 83 -8.2 -4.46854 | AGACAAAACGGAAAA CGCC GAT GGCG TAGACCAAGGATAGA Atu3892 988285 - 987992 - | hypothetical protein TERM 1015 988154 - 988115 - G 70 -9.9 -3.55122 | opp_overlap 988099 988120 988121 GAGCAGCGAAATGAA CAGCCTGTCGCCGCGCG TCGTTT CGAACCGCAACAGGCCG AAGCGGGGATTGCCG Atu3893 989202 - 988288 - | ABC transporter, membrane spanning protein (sugarl) Atu3894 990072 - 989206 - | ABC transporter, membrane spanning protein (sugar) TERM 1016 989787 - 989801 + g 75 -7.8 -4.1899 | overlap 989775 AGATCGGCACGCCGA TGCCGG ATT TCGGCA TTTTGAGTGCGATGA Atu3895 991145 - 990075 - | ABC transporter, nucleotide binding/ATPase protein (sugar) TERM 1017 990129 - 990113 - G 72 -2.2 -4.81685 | gap 1, overlap 990103 990114 990115 AGGAATCAGCAAAAA CGCCGAC CGCA GCCGG-G TCGAAACGGACACCC Atu3896 992230 - 991160 - | ABC transporter, nucleotide binding/ATPase protein (sugar) glpD 993791 - 992268 - | glycerol-3-phosphate dehydrogenase TERM 1018 993197 - 993207 + g 75 -2.4 -4.98531 | GGTAGGTCTTGCTTT CGCC GGC GGCA TTTTTCGTTTCAACC TERM 1019 993483 - 993467 - G 74 -5.7 -4.55798 | GATCGTAAAGGAAAA GCCCGAG ACG CACGAGC CAGGCCGGGCGCACC glpR 994672 - 993899 - | DeoR family transcriptional regulator cysG 996241 - 994814 - | siroheme synthase TERM 1020 996078 - 996099 + g 71 -9.5 -3.73775 | gap 1, overlap 996062 TTTGCGACGAGCGTC GCGAGGCTTT CCG AAAGCC-CGC TTTCCTCGCAATAAA nasA 998900 - 996252 - | nitrate reductase large subunit TERM 1021 997164 - 997186 + g 70 -9.8 -3.53722 | GCGGCCGGTATTTAG CGTCAGCGGA TAG TCCGCCGATG TTCTGTCCGTCTCCG TERM 1022 998696 - 998656 - G 79 -7.6 -4.56775 | gap 2, opp_overlap 998694 998695 ATGGCGTCGGAAAAA CGGGAAGCGACGAGATCGAG CGC CTCG-TCCCAT-GCCGCCCG CCTGCCGGCGATTTC nirD 999450 - 999115 - | nitrite reductase small subunit nirB 1001903 - 999456 - | nitrite reductase large subunit TERM 1023 1000814 - 1000830 + g 71 -5.7 -4.41494 | opp_overlap 1000814 TCTCGCCGTAAAGAA CCGCGCC GAT GATGCGG TTTTCCTTGAGGATC nrtC 1002706 - 1001909 - | ABC transporter, nucleotide binding/ATPase protein (nitrate) TERM 1024 1002282 - 1002301 + g 74 -6.4 -4.3953 | gap 1 ACACGCTGCTTCATG CCG-CCGGA AAT TTCGGACGG TTTCTTGTCCTTGGC nrtB 1003613 - 1002720 - | ABC transporter, membrane spanning protein (nitrate) TERM 1025 1003715 - 1003738 + r 70 -8.8 -3.72695 | opp_overlap 1003706, overlap 1003716 GATGAAGGGCGATAC CCGGTCTCCT CCTC AGGAGGCCGC TTTGATGGAAAGGCT TERM 1026 1003716 - 1003737 + r 72 -12.3 -2.83403 | overlap 1003715 ATGAAGGGCGATACC CGGTCTCCT CCTC AGGAGGCCG CTTTGATGGAAAGGC ntrA 1005019 - 1003727 - | ABC transporter, substrate binding protein (nitrate) TERM 1027 1005242 - 1005222 - R 76 -3.2 -5.0133 | overlap 1005224 GACCGGTGCAAAAAA TAGGACGC AAGAG GCGTGCCA GTTAATAAAAATAAA nrtC 1006695 - 1005400 - | ABC transporter, nucleotide binding/ATPase protein (nitrate) nasT 1007318 - 1006731 - | two component response regulator TERM 1028 1007388 - 1007374 - R 73 -5.6 -4.58395 | opp_overlap 1007379 CTGACCCGGCAAAAA TGGCGC GGA GCGGCA AGGGGTGTTTTCCCG Atu3908 1008085 - 1007420 - | GntR family transcriptional regulator Atu3909 1008352 - 1009593 + | hypothetical protein TERM 1029 1009595 - 1009643 + F 100 -14.7 -4.45068 | opp_overlap 1009598 1009599 1009601, overlap 1009597 1009598 TGCTCGGCCTGTAAT AAACTAGAGCGTTTCCGCATTTC GCA GAAAAGCGGAAACGCTCTACATA TTTGTTATTACGCAT TERM 1030 1009597 - 1009641 + F 100 -17.3 -3.82963 | opp_overlap 1009598 1009599 1009601, overlap 1009595 1009598 CTCGGCCTGTAATAA ACTAGAGCGTTTCCGCATTTC GCA GAAAAGCGGAAACGCTCTACA TATTTGTTATTACGC TERM 1031 1009640 - 1009598 - f 100 -20.8 -4.15044 | opp_overlap 1009597 1009595 1009598, overlap 1009599 1009601 TCGGCCTGTAATAAA CTAGAGCGTTTCCGCATTTC GCA GAAAAGCGGAAACGCTCTAC ATATTTGTTATTACG TERM 1032 1009598 - 1009640 + F 100 -20.8 -2.89055 | opp_overlap 1009598 1009599 1009601, overlap 1009597 1009595 TCGGCCTGTAATAAA CTAGAGCGTTTCCGCATTTC GCA GAAAAGCGGAAACGCTCTAC ATATTTGTTATTACG TERM 1033 1009639 - 1009599 - f 100 -24.3 -3.08812 | opp_overlap 1009598 1009597 1009595, overlap 1009598 1009601 CGGCCTGTAATAAAC TAGAGCGTTTCCGCATTTC GCA GAAAAGCGGAAACGCTCTA CATATTTGTTATTAC TERM 1034 1009637 - 1009601 - f 100 -22.5 -3.10244 | opp_overlap 1009598 1009597 1009595, overlap 1009599 1009598 GCCTGTAATAAACTA GAGCGTTTCCGCATTTC GCA GAAAAGCGGAAACGCTC TACATATTTGTTATT TERM 1035 1009841 - 1009817 - g 72 -12.9 -3.04144 | TCTCCAGCGCCAACA TCGCCTGCG GATTTCA CGCAGGCGA CCCGGCCGGCATCTA TERM 1036 1010304 - 1010294 - g 72 -2.4 -4.75372 | ATGATGCAGCAAAAA TCGC CGA GCGC ATGGTGCAGCTTGCC Atu3910 1009717 - 1010484 + | hypothetical protein Atu3911 1010496 - 1011305 + | hypothetical protein TERM 1037 1012720 - 1012674 - g 82 -15.1 -3.18274 | gap 1 GCCAGTGGAACGCAA GGACAGCGCCGAGTTGCCGAGC GAAG GCACGGCAACG-GGCGCGATCC AGATTCCCCATAGCG Atu3912 1011313 - 1012923 + | hypothetical protein TERM 1038 1013272 - 1013328 + G 75 -8.6 -4.15044 | overlap 1013271 GCGACAAGGTCATGG CGCGGCGCATCGCCACCGGT-GTTGGCG CAC CGCTGGTTGCCGGCAGCGATG-GCCCCG TTTCTTCCGCCGCCG TERM 1039 1013461 - 1013506 + G 74 -6.7 -4.39002 | gap 1, opp_overlap 1013463, overlap 1013464 1013464 TCGCAGAGCTCTATG AATCCGCCGTGCGCGA-GGCGA CCG TCGCCTTCGGCCGCGGCGAGTG TTTTCTGGAACGTTT TERM 1040 1013464 - 1013504 + G 76 -10.4 -3.79687 | gap 2, opp_overlap 1013463, overlap 1013461 1013464 CAGAGCTCTATGAAT C-CGCCGTGCGCGA-GGCGA CCG TCGCCTTCGGCCGCGGCGAG TGTTTTCTGGAACGT TERM 1041 1014458 - 1014437 - g 72 -2.2 -4.82901 | gap 1, overlap 1014441 TGCGGTCGAGAAAAA GGAAGGCGA AATGA CCGCCC-CC GTTTCCGGCACCCTG Atu3913 1012920 - 1014650 + | biotin carboxylase TERM 1042 1014690 - 1014725 + F 100 -22 -3.85817 | gap 1, opp_overlap 1014657 CAATCGCAGATCGCG CGGCACCGGCGGCGGAA CCC TTTCGCCGCCGGT-CCG TTTATGGCGCGACCT amyA 1014762 - 1016249 + | cytoplasmic alpha-amylase TERM 1043 1016253 - 1016265 + T 74 -10.5 -3.61398 | opp_overlap 1016251 GATTCCGAATAAGGG GCGGC TCA GCCGC TTATTCAGCGGAGAC soxR 1016721 - 1016266 - | MerR family transcriptional regulator TERM 1044 1016856 - 1016836 - R 100 -16.1 -5.41143 | GATTGGGCAAAAAAA GAGGCGCCC GGC GGGCGCCCC TGAAATTCCGCTACT bfrA 1019019 - 1016911 - | exogenous ferric siderophore receptor TERM 1045 1019524 - 1019507 - g 93 -11.3 -4.36914 | overlap 1019488 CCGCCCCGGATAAAA GCGGTTG GGAA CAACCGC TGCTGATGAAAGCGC Atu3917 1019167 - 1020636 + | hypothetical protein Atu3918 1021841 - 1020642 - | hypothetical protein TERM 1046 1021199 - 1021185 - G 84 -11.4 -4.04209 | GCAAATGATGACAAA GAGCGC GCA GCGCTC CGCCAGATGTTCGCC TERM 1047 1021581 - 1021565 - G 91 -7.9 -4.73613 | opp_overlap 1021565 1021568, overlap 1021568 TCAGCACGAACAAAA GCAGCCG GAC CGGCTCC TTCTCGGTATTCAGG Atu3919 1022181 - 1021897 - | hypothetical protein Atu3920 1022278 - 1022538 + | hypothetical protein Atu3921 1022584 - 1022742 + | hypothetical protein repC 1024165 - 1022888 - | replication protein C TERM 1048 1024279 - 1024304 + r 100 -6.7 -5.86976 | TTAGATCAAAGAAAG GCTTCCGTGCG GCAA CGTTCGGGGGC TTTTTTCTTTTGTGA repB 1025364 - 1024351 - | replication protein B TERM 1049 1024486 - 1024512 + g 83 -4.3 -5.07567 | overlap 1024487 CTTTGCCAGTCGTCC CCCGGTTTCTG ATGAC CAGACGCCGGC TTTTTTGGCCTGTGC repA 1026575 - 1025361 - | replication protein A TERM 1050 1026137 - 1026125 - G 73 -10.5 -3.65522 | GATCGATGGCAAGAA CGCGG TAA CCGCG CAGCGCCAGATATTG TERM 1051 1026812 - 1026829 + H 72 -4.1 -4.70879 | gap 1 AAATAGAACTACTTA GGGA-CGG TCT CCGCTTCC TTTTTAAAGTTTGCC Atu3925 1027010 - 1028398 + | hypothetical protein Atu3926 1028765 - 1029160 + | translation initiation inhibitor Atu3927 1029193 - 1030281 + | hypothetical protein Atu3928 1030354 - 1031832 + | hypothetical protein Atu3929 1032417 - 1031845 - | hypothetical protein Atu3930 1033466 - 1032456 - | hypothetical protein TERM 1052 1032937 - 1032917 - G 93 -8.1 -5.055 | opp_overlap 1032917 1032930 TGAAGGTCGAAAAAA GCGGGCCGG TCA CCGGGGCGC TTGCTGCCGTATAGT TERM 1053 1033084 - 1033098 + g 74 -3.4 -4.7373 | overlap 1033085 1033086 CCGACGATGATGGCC TTGCGG ACG CCGCGC TTTTTCATCAACTGA TERM 1054 1033290 - 1033301 + g 75 -2.2 -4.98857 | overlap 1033286 GAAAACGATCGGCGG CAGG TCTG CTTG TTTTTGTGGTTCGAT TERM 1055 1033654 - 1033630 - R 100 -16.4 -3.5936 | overlap 1033646 CGGAAAGGGTGGAAA GCCGCGCGGC GATAG ACCGCGCGGC ACGATAATCAATTGC hutU 1035335 - 1033662 - | urocanate hydratase Atu3932 1036150 - 1035350 - | hypothetical protein hutH 1037768 - 1036224 - | histidine ammonia-lyase TERM 1056 1036616 - 1036637 + g 77 -3.5 -5.00616 | overlap 1036617 TGACTTCGGCGATCA TCAGGCCGG AGTT CAGGCCCGG TTTTTTCGAAAGGAA TERM 1057 1036724 - 1036669 - G 93 -17.6 -3.32844 | gap 1, overlap 1036673 1036674 GCCGGCAGGCCATAA GAAAGCGCCG-GATCGACCAGCAGCGC TAC ACGCCGCTGGGCGATCGCGCCGATCTC ACAAATGGCAAGCGC TERM 1058 1036717 - 1036673 - G 100 -15.8 -4.32177 | gap 2, overlap 1036669 1036674 GCAGGCCATAAGAAA GCGCCGGATCGACCAGCAGCGC TAC ACGCCGCTGGGCGAT-CG-CGC CGATCTCACAAATGG TERM 1059 1036719 - 1036674 - G 90 -18.3 -3.18824 | gap 1, overlap 1036673 1036669 CAGGCCATAAGAAAG CGCCG-GATCGACCAGCAGCGC TAC ACGCCGCTGGGCGATCGCGCCG ATCTCACAAATGGCA hutI 1039024 - 1037765 - | imidazolonepropionase TERM 1060 1038164 - 1038119 - G 87 -9.8 -4.4009 | gap 2, opp_overlap 1038157 CCTGAGCGCATAAAA GGCGCCGGGCAGAAGCACGG CCACGGTT CCG-GCTTTTGCC-AGCGCC TTCGCACCGGTCTCG Atu3935 1039138 - 1040484 + | N-formimino-L-glutamate deiminase Atu3936 1040507 - 1041253 + | GntR family transcriptional regulator TERM 1061 1042383 - 1042363 - T 71 -9.7 -3.5594 | opp_overlap 1042362 1042359, overlap 1042354 AAGTCAGGGGTGAAA TCCCGCAGC TCA ACTGCGGAA CTGCCTTTGATACTG TERM 1062 1043828 - 1043858 + T 100 -16.2 -3.54653 | opp_overlap 1043801 1043837, overlap 1043831 TTCGATCCCGCTCAG CTCCACCAATCGCG GAA CGCGATTGGTGTGG TTATGTGCTGACGCT TERM 1063 1043831 - 1043855 + T 100 -18.7 -2.9062 | opp_overlap 1043837, overlap 1043828 GATCCCGCTCAGCTC CACCAATCGCG GAA CGCGATTGGTG TGGTTATGTGCTGAC TERM 1064 1044234 - 1044244 + T 84 -3.2 -5.29445 | GTAGGAAGGATCGCT TGTC CGA GGCA TTTTTGTTGTTGGAG Atu3940 1044699 - 1044310 - | hypothetical protein TERM 1065 1044730 - 1044778 + H 93 -13.4 -3.81447 | gap 1, opp_overlap 1044730 GCAACCCACCTTAAA TGCTTGGAAAATCCAGTCTGTTT TAAC GAACGGCCTGGGTTT-CCAAGCA TTATTATAAGGTATC TERM 1066 1045947 - 1045931 - H 77 -8 -4.08546 | overlap 1045935 ATGAGTAACGATAAA GGGAGT GAGAG ACTCCC TCGCCGAAAGACCAA TERM 1067 1046335 - 1046322 - H 74 -4.5 -4.7254 | ACTGTTTATCAAAAA CACAG GGCT CTGCG AAGTAGCAATACGAC Atu3942 1047307 - 1047564 + | hypothetical protein TERM 1068 1047854 - 1047872 + T 86 -11.7 -3.8901 | opp_overlap 1047853 1047854 CCAGCCGACACCAAG GGCCGCT ATCCA AGCGGCC TTTCGTCGTTTAAGG TERM 1069 1047872 - 1047854 - T 72 -11.7 -2.55999 | opp_overlap 1047854, overlap 1047853 CCAGCCGACACCAAG GGCCGCT ATCCA AGCGGCC TTTCGTCGTTTAAGG TERM 1070 1047968 - 1047940 - T 89 -13.4 -3.53012 | TGTGCGCCCCTTAAA GGAGATAAATTG TGCCG CAATTTATCTCC GGCAAAGATCCGTCG TERM 1071 1048002 - 1047977 - T 70 -9.7 -3.34715 | overlap 1047975 1047996 TATCTCCGGCAAAGA TCCGTCGTCGC TAAA GCAACGACGTA ACCGCGACATTCGGC TERM 1072 1048033 - 1048004 - T 81 -12.9 -3.15252 | gap 1, overlap 1047996 AAAGCAACGACGTAA CCGCGACATTCGGC CTT GCCGAATG-CGCTG GACGCGGGGTGGAGC TERM 1073 1048163 - 1048130 - T 95 -18.3 -2.52156 | opp_overlap 1048135, overlap 1048135 ATTTAAACCCAATAT CAAAAGGGCTCCGAG GAAA CTCGGAGCCCTTTTT GCGTTCAGAGCGCCT TERM 1074 1048158 - 1048135 - T 100 -18.2 -4.44284 | opp_overlap 1048135, overlap 1048130 AACCCAATATCAAAA GGGCTCCGAG GAAA CTCGGAGCCC TTTTTGCGTTCAGAG TERM 1075 1048135 - 1048158 + T 100 -18.2 -4.74103 | opp_overlap 1048130 1048135 AACCCAATATCAAAA GGGCTCCGAG GAAA CTCGGAGCCC TTTTTGCGTTCAGAG TERM 1076 1048808 - 1048832 + T 76 -12.1 -3.05997 | opp_overlap 1048802, overlap 1048805 GTCACATGAGGTGAG GGCGTCCTGCA ACT TGCGGGACGGC TCTGCTTTATCAGCG ordL 1050298 - 1048988 - | oxidoreductase Atu3948 1050598 - 1051743 + | hypothetical protein arcB 1051754 - 1052698 + | ornithine cyclodeaminase TERM 1077 1053408 - 1053430 + G 71 -6.8 -4.25104 | overlap 1053409 GGACATGATTTCCAT CACCGGCTCG ACC CGGGCCGGAA TTTTGGTCGCACAGG Atu3950 1052716 - 1054173 + | aldehyde dehydrogenase Atu3951 1055090 - 1054176 - | LysR family transcriptional regulator TERM 1078 1055447 - 1055420 - g 70 -4.8 -4.57569 | overlap 1055441 1055442 GCATTGGTCGAAAAA GGCTGGATCG GAGGCGAA CAATCCGGCC GCAACTGGGGCTGGT TERM 1079 1055490 - 1055476 - g 84 -10 -4.25104 | GTGCCGCCAGCAAAA TCGCGA CGC TCGCGA ACTGCCGCTTGCCAT TERM 1080 1056323 - 1056297 - g 72 -2.2 -4.74103 | overlap 1056298 1056299 CTCCCAATGCAAAAA TGGTTCACGCAA CCG TTGCGCAAGCGA AAGCGATTTATCCGG Atu3952 1055276 - 1056604 + | oxidoreductase Atu3953 1057737 - 1056739 - | hypothetical protein Atu3954 1058616 - 1057765 - | ABC transporter, membrane spanning protein TERM 1081 1058632 - 1058647 + r 83 -10.4 -4.04474 | CTTGCACCTGCCTTG GCGCGA CTGG TCGCGC TTTGTGTAAGCCTGT Atu3955 1059461 - 1058613 - | ABC transporter, membrane spanning protein Atu3956 1060566 - 1059475 - | ABC transporter, nucleotide binding/ATPase protein Atu3957 1061531 - 1060653 - | ABC transporter, substrate binding protein (glycine-betaine) Atu3958 1062929 - 1061583 - | oxidoreductase TERM 1082 1062491 - 1062513 + g 74 -11.2 -3.45571 | overlap 1062487 TCTGGTTCAGTGTCA TGCCGCGCCG GGT TGCCGCGGCA TTGATCTTTCCGGCC dhaL 1064443 - 1062926 - | aldehyde dehydrogenase TERM 1083 1063324 - 1063349 + g 79 -8.3 -4.4715 | AGATTCCCTTCTCGG TCTTGCCACCG TGAA CGATGGTAAGA TTTTCTGCCTTCACG dapA 1065347 - 1064436 - | dihydrodipicolinate synthase Atu3961 1066093 - 1065344 - | GntR family transcriptional regulator Atu3962 1067394 - 1066585 - | calcium-binding protein, regucalcin TERM 1084 1067347 - 1067363 + g 71 -7.9 -4.08394 | TTGGCCGGGCTCGAG CGCTGCG GAC CGCACCG TTTTGCCGAGGATAT Atu3963 1068233 - 1067535 - | GntR family transcriptional regulator TERM 1085 1069185 - 1069235 + G 70 -10.2 -3.55761 | gap 1, opp_overlap 1069187, overlap 1069189 1069222 1069224 CGATGGCCGGCAGGA GACTTTTGG-CGGCGCGGCCGCC GGCACG GGCGGCGGCGCCGACCCTATGGC TTTCACGCATGAATG TERM 1086 1069294 - 1069327 + G 70 -5.2 -4.52857 | gap 2, overlap 1069295 GACGCCATCTCTTCA G-GACGC-CCGCCGGT CGTC ACCGGCGAAGCGGCTC TTTTGTCTCACAGAT TERM 1087 1069295 - 1069325 + G 73 -8.9 -3.87627 | gap 1, overlap 1069294 ACGCCATCTCTTCAG GACGC-CCGCCGGT CGTC ACCGGCGAAGCGGC TCTTTTGTCTCACAG Atu3964 1068391 - 1069404 + | dehydrogenase Atu3965 1069397 - 1070413 + | oxidoreductase TERM 1088 1071286 - 1071276 - g 71 -8.2 -4.11216 | opp_overlap 1071268 1071276 1071275, overlap 1071239 1071277 GGCTGATGGCGAAAA CGGC TTC GCCG GTTTTGTCGAAGCCA Atu3966 1070410 - 1071483 + | oxidoreductase Atu3967 1071506 - 1072777 + | ABC transporter, substrate binding protein (sugar) TERM 1089 1072826 - 1072778 - f 72 -12.4 -2.55267 | gap 2, opp_overlap 1072775, overlap 1072768 1072766 AAACAGGCGAAGTGA TCCATCGCCTTCCGGCGTGGCGCA TGC CGCGCCGCGCCGGAT--CGAAGGA GGACCCTCATGTATA Atu3968 1072835 - 1073803 + | ABC transporter, membrane spanning protein (sugar) TERM 1090 1074013 - 1074035 + F 79 -12.6 -2.87132 | CCGTTGTTGTGGATG GGCAGGCGGC GCC GCTGCCGGCC TATGTCGACAAGGAC Atu3969 1074066 - 1074839 + | ABC transporter, membrane spanning protein (sugar) Atu3970 1074862 - 1075941 + | ABC transporter, nucleotide binding/ATPase protein (sugar) TERM 1091 1077287 - 1077310 + G 70 -10.2 -3.55444 | gap 1, overlap 1077287 CTGGTGCTGCGTAAT G-CCGGTCCGC TCG GCGGTCCGGGC TTTCCGGAATGGGGC ilvD 1075979 - 1077703 + | dihydroxy-acid dehydratase Atu3972 1077713 - 1078510 + | hypothetical protein Atu3973 1078544 - 1079254 + | hypothetical protein TERM 1092 1079275 - 1079309 + T 76 -2.7 -5.12707 | gap 1, overlap 1079280 CTCAAAGTTGGTCGC ATTGACGGGCGTC-CC TTGC GGTGACGCCCGTTTCC TTTTTTAGCGTTTCG TERM 1093 1079280 - 1079304 + T 100 -13.6 -4.42765 | gap 1, overlap 1079275 AGTTGGTCGCATTGA CGGGCGTC-CC TTGC GGTGACGCCCG TTTCCTTTTTTAGCG ina 1084558 - 1079363 - | ice nucleation-like protein glf 1085931 - 1084774 - | UDP-galactopyranose mutase TERM 1094 1085260 - 1085286 + g 71 -6.4 -4.16681 | opp_overlap 1085239 1085276, overlap 1085261 1085264 1085267 TCCGGTGGCCGGCGC TTCGGCGCGGTC AAA GCGCGTGCCGAG TTTTACCGTGATATT Atu3976 1088078 - 1086033 - | hypothetical protein TERM 1095 1086800 - 1086843 + g 100 -20.2 -3.64703 | gap 1, opp_overlap 1086793 CGAAGGCATCCTCCG GCAGTCCGACGTCGGCCCGGC TCG GCCGGGC-GGCGACGGGCCGC TTTCGGTCGAGCGGC TERM 1096 1087657 - 1087686 + g 78 -5 -4.7373 | gap 1, opp_overlap 1087632 TTCTGCAGGGTCATG TGCCGATGGCCGA TCGTC TCGGC-GTCGACA TTTTTCGTCACCTCG TERM 1097 1088511 - 1088559 + r 76 -10.4 -3.66028 | opp_overlap 1088517 1088518 1088521, overlap 1088521 1088522 1088558 ATTCTGTAAGGTTAT TTCAAACGTAC-CACGACGCGGCT TTT GGCCGCGTCGTGTGT-TGTCTGGG TTCTTAAGCCTTATA TERM 1098 1088553 - 1088517 - R 71 -9.5 -3.61103 | opp_overlap 1088511 1088521 1088522, overlap 1088518 1088521 TAAGGTTATTTCAAA CGTAC-CACGACGCGGC TTTTG GCCGCGTCGTGTGTT-G TCTGGGTTCTTAAGC TERM 1099 1088521 - 1088550 + r 100 -16.5 -3.57629 | gap 1, opp_overlap 1088521 1088517 1088518, overlap 1088511 1088522 GTTATTTCAAACGTA C-CACGACGCGGCT TTT GGCCGCGTCGTGTG TTGTCTGGGTTCTTA TERM 1100 1088549 - 1088521 - R 85 -16 -2.65354 | opp_overlap 1088511 1088521 1088522, overlap 1088517 1088518 GTTATTTCAAACGTA CCACGACGCGGC TTTTG GCCGCGTCGTGT GTTGTCTGGGTTCTT TERM 1101 1088522 - 1088548 + r 100 -20.2 -3.35384 | opp_overlap 1088521 1088517 1088518, overlap 1088521 1088511 TTATTTCAAACGTAC CACGACGCGGCT TTT GGCCGCGTCGTG TGTTGTCTGGGTTCT ina 1091539 - 1088570 - | ice nucleation-like protein TERM 1102 1091396 - 1091377 - G 71 -7.8 -4.13767 | CTTCGGAGCTGAAAA GAGCAAGG TTAT CCGTGCTC AACGAGGCGATCTGA TERM 1103 1092054 - 1092067 + r 95 -3.1 -5.87996 | overlap 1092059 AACGCTTGCCCGCCG CGGTT GAAA AATCG TTTTTTTCTTGATTC Atu3978 1093194 - 1092295 - | LysR family transcriptional regulator Atu3979 1093313 - 1094245 + | dioxygenase TERM 1104 1094284 - 1094330 + F 81 -12.1 -3.47349 | opp_overlap 1094296 TGACCATACCATTCC GCCTTCTCAAGACGGCTGCCC CTGAC GGGCAGCCGGCCGGCGAAGCC TTGTCAATTTCACCG TERM 1105 1094318 - 1094296 - f 100 -16.3 -3.01712 | opp_overlap 1094284 TCCGCCTTCTCAAGA CGGCTGCCC CTGAC GGGCAGCCG GCCGGCGAAGCCTTG TERM 1106 1094702 - 1094686 - g 79 -7.9 -4.56597 | TGCGCTGGCGAAAAA TGCCGCC ACC GGCCGCA GGAAGATCGTCGTCT Atu3980 1094384 - 1095073 + | hydrolase TERM 1107 1095086 - 1095122 + F 100 -17.3 -3.91897 | gap 1 TAAGCTTTCAGCCAT GCCACGCCGG-CGGGA CCAGTA TCCCGTCCGGCGCGGC TTTATCCATCCAAAG Atu8193 1095147 - 1095437 + | hypothetical protein Atu3982 1095437 - 1097419 + | hypothetical protein TERM 1108 1097471 - 1097439 - f 100 -17 -4.28188 | opp_overlap 1097444, overlap 1097440 GATCGACAAGAGAAA TGCAACGGGCGACG CATGC CGCCGCCCGTTGCC TGCAAACCTCGGACG TERM 1109 1097470 - 1097440 - f 100 -20.5 -3.1619 | opp_overlap 1097444, overlap 1097439 ATCGACAAGAGAAAT GCAACGGGCGACG CATGC CGCCGCCCGTTGC CTGCAAACCTCGGAC TERM 1110 1097444 - 1097466 + F 76 -11.9 -3.05596 | opp_overlap 1097440 1097439 ACAAGAGAAATGCAA CGGGCGACG CATGC CGCCGCCCG TTGCCTGCAAACCTC TERM 1111 1097813 - 1097824 + G 89 -7.2 -5.05301 | overlap 1097801 1097811 GCCTGCAGCCGGCGG CGGC ATTT GCCG TTTTTGTCATTATTT Atu8194 1097629 - 1098069 + | hypothetical protein Atu3984 1098066 - 1099664 + | MFS permease TERM 1112 1099660 - 1099700 + T 86 -4 -5.40072 | gap 1, opp_overlap 1099672, overlap 1099672 ATCGCCCAGGAAAAG CATAAAC-AGAAAGGGGCC GAAA GGCCCCTTTTTCGTTCTCG TTTTTTTAAAGCCCG TERM 1113 1099687 - 1099672 - T 95 -11.8 -4.42513 | opp_overlap 1099660 1099672 AAGCATAAACAGAAA GGGGCC GAAA GGCCCC TTTTTCGTTCTCGTT TERM 1114 1099672 - 1099687 + T 100 -11.8 -4.95876 | opp_overlap 1099672, overlap 1099660 AAGCATAAACAGAAA GGGGCC GAAA GGCCCC TTTTTCGTTCTCGTT proC 1100502 - 1099720 - | pyrroline-5-carboxylate reductase Atu3986 1100720 - 1101337 + | hypothetical protein hexA 1102215 - 1101334 - | LysR family transcriptional regulator TERM 1115 1102025 - 1102011 - G 79 -12.8 -3.51934 | overlap 1102009 CGGGTGCGAGAAACA CCGCCC CCT GGGCGG ACAGGCGCACCGAAC TERM 1116 1102368 - 1102396 + G 76 -9.6 -4.12532 | gap 1, opp_overlap 1102363 1102376, overlap 1102366 TACCGAACAAGCGGG CAGCAG-AAGCGC CATG GCGCTTGCTGCCG TTTGTCTCTCCGCCC TERM 1117 1102549 - 1102584 + G 71 -7.4 -4.15788 | gap 1 GTGCTGATGGCAACC GGCGCGCTGGCCGACCG CTT CGGCCG-CAAACGCGTC TTTATTGCCAGCATT Atu3988 1102339 - 1103859 + | MFS permease TERM 1118 1103843 - 1103872 + T 100 -11.4 -5.00616 | TTGGCCGCCAACGGT GGGAGGGCAACG AGTAAC CGCTGCCCTTCC TTTTTTCCGAACGGC copC 1104683 - 1104207 - | copper tolerance protein copA 1106076 - 1104727 - | multicopper oxidase copB 1107569 - 1106091 - | copper tolerance protein TERM 1119 1107533 - 1107512 - G 91 -8 -4.83169 | AGCCGCTGAGAAAAA GCGGCAAC GACAGG ATTGCCGC GAGTTTTGATCCGAG Atu8195 1108294 - 1107884 - | hypothetical protein TERM 1120 1108022 - 1108037 + g 73 -10.4 -3.61889 | opp_overlap 1108000 1108021 1108020, overlap 1108034 GCCGAGACAGAAATC GCCGCA GCAT TGCGGC TTTGCGGGCTTTTTG Atu3994 1109311 - 1108391 - | hypothetical protein Atu3995 1110182 - 1109394 - | AraC family transcriptional regulator TERM 1121 1109666 - 1109678 + g 78 -2.6 -5.03715 | CCGTAGCAGGCGAAA GCTC CTGAC GGGC TTTTTTCCGCATCAT TERM 1122 1109787 - 1109762 - G 70 -10.3 -3.53444 | GCATGGCGGGCGAAA GCCGGCCCCGG ACCG CCATGGCCAGC CGGGCAATGTGGGCC TERM 1123 1109992 - 1109980 - G 71 -6.9 -4.18197 | ATCCTGTAGTGAAAA GCAGC CTC GCCGC CCGGTATCGCGTCAT TERM 1124 1110352 - 1110331 - R 71 -5.9 -4.36914 | opp_overlap 1110331 TGCTCGGGCAGAAAA TCATCGGTT GCGA AACGGATGA TGGTGTTCGTGGCCT Atu3996 1110839 - 1110393 - | hypothetical protein TERM 1125 1111046 - 1111024 - H 90 -4.3 -5.40072 | opp_overlap 1111024 GCCGTCCGAAAAAAA TAGATAAAA AGAAG TTCTATCTA TTTATTTTTGGAAAG TERM 1126 1111024 - 1111046 + H 72 -2.1 -4.85782 | opp_overlap 1111024 GCCGTCCGAAAAAAA TAGATAAAA AGAAG TTCTATCTA TTTATTTTTGGAAAG bioB 1111072 - 1112091 + | biotin synthetase TERM 1127 1112641 - 1112665 + G 73 -4.2 -4.58466 | gap 1, overlap 1112634 CGCTTGCAGCCCTGG CCGATCTTGCC GAAC GGCATGG-CGG TTTTCTGGTTGTCGA TERM 1128 1113014 - 1112989 - g 71 -9.7 -3.72051 | gap 1, overlap 1112990 1112993 GCGAAGAATTGCAAA GCCAGCTGGGTG TGA CACCCAGC-GGT TCGCAGATCCTGCCG TERM 1129 1113013 - 1112990 - g 73 -13.2 -2.82749 | gap 1, overlap 1112989 1112993 CGAAGAATTGCAAAG CCAGCTGGGTG TGA CACCCAGC-GG TTCGCAGATCCTGCC TERM 1130 1113011 - 1112993 - g 76 -14.6 -2.66593 | overlap 1112990 1112989 AGAATTGCAAAGCCA GCTGGGTG TGA CACCCAGC GGTTCGCAGATCCTG bioF 1112088 - 1113233 + | 8-amino-7-oxononanoate synthase bioD 1113230 - 1113868 + | dithiobiotin synthetase bioA 1113865 - 1115157 + | adenosylmethionine--8-amino-7-oxononanoate transaminase TERM 1131 1115535 - 1115545 + G 70 -4.6 -4.56969 | overlap 1115529 TCGATCTTGCCGGGG CCTG TTC CGGG TTTCTTTATGCGCTT fabH 1115195 - 1116181 + | 3-oxoacyl-(acyl carrier protein) synthase II Atu4002 1117111 - 1116218 - | hypothetical protein Atu4003 1117556 - 1117155 - | hypothetical protein TERM 1132 1117447 - 1117433 - G 76 -12.8 -3.4072 | opp_overlap 1117431 1117430 1117428 CACTTTCGACGAGAA CGGCGG TAA CCGCCG GGTCCTTGTGTAGGG Atu4004 1117648 - 1118490 + | LysR family transcriptional regulator Atu4006 1119184 - 1118747 - | AsnC family transcriptional regulator TERM 1133 1119072 - 1119099 + g 71 -9 -3.70902 | overlap 1119073 TTTTCCATTTTTTCG ATGCGCGCGCGA ACCG TCGCGCGCGAGG TTTCCGTCTCCACCG TERM 1134 1119609 - 1119661 + G 90 -4.7 -5.34555 | gap 1 GCGACCATGCGATTT CGGCCGGAACCGTGGCCGGCAT GGCACGCCGG GTGGCGGAAACGGG-CCGGCCG TTTTTTGTGCTCTGG arcA 1119314 - 1120234 + | arginase tnp 1122373 - 1120835 - | IS3 family transposase Atu4011 1123818 - 1122934 - | hypothetical protein TERM 1135 1123258 - 1123228 - G 70 -3.2 -4.67982 | gap 1, overlap 1123230 GGGCACCCAATAAAA CGGGCCGACCAGC GTCAGT GCTGCT-GCCCCG GCCACGCCAGTATAG TERM 1136 1123943 - 1123955 + r 71 -4.7 -4.56597 | opp_overlap 1123942, overlap 1123944 TAGCTGCCATGCAAG TCCGG ACG CCGGC TTTTTAGAAGGGCAA TERM 1137 1124126 - 1124106 - R 76 -12.6 -2.80994 | overlap 1124096 TTCAATGTGATCAGA TCCTCGGC ACAGG GCCGAGGA TGAGAGAACGGCAGC TERM 1138 1124152 - 1124135 - R 74 -10.5 -3.56273 | opp_overlap 1124134, overlap 1124096 CCGAGGATGAGAGAA CGGCAGC CTTC GCCGCCG ATTCGGTACCATGCT idhA 1125169 - 1124177 - | myo-inositol 2-dehydrogenase TERM 1139 1125373 - 1125328 - R 84 -13.1 -3.31792 | opp_overlap 1125335, overlap 1125335 GGAGCAGGTCGAGAA CGCGAAATCCCCCGCCTTGCC AACA GGCCCTGCGGGGGATTGCGTG ACGAAGGGGTCTGGC TERM 1140 1125366 - 1125335 - R 79 -11.4 -3.69354 | opp_overlap 1125335, overlap 1125328 GTCGAGAACGCGAAA TCCCCCGCCTTGCC AACA GGCCCTGCGGGGGA TTGCGTGACGAAGGG TERM 1141 1125335 - 1125366 + r 72 -11.4 -3.05384 | opp_overlap 1125335 1125328 GTCGAGAACGCGAAA TCCCCCGCCTTGCC AACA GGCCCTGCGGGGGA TTGCGTGACGAAGGG cyaA 1126640 - 1125396 - | putative adenylate cyclase exsI 1127097 - 1126867 - | transcriptional regulator Atu4015 1128458 - 1127343 - | hypothetical protein kgtP 1128726 - 1130057 + | MFS permease TERM 1142 1130084 - 1130103 + T 100 -12.8 -5.07652 | opp_overlap 1130084 ATCGGCTCCAGGAAA GCCCCGTC TCCC GGCGGGGC TTTTGTTTTCAGGCC TERM 1143 1130103 - 1130084 - T 76 -10.6 -3.72695 | opp_overlap 1130084 ATCGGCTCCAGGAAA GCCCCGTC TCCC GGCGGGGC TTTTGTTTTCAGGCC Atu4018 1131449 - 1130112 - | two component sensor kinase TERM 1144 1130858 - 1130879 + g 78 -3 -5.07107 | gap 2, overlap 1130859 ACGGCTGTGTCGCAA G-CGGC-GCA AGAT TGCCGCCGTC TTTTTTCCCGATTTC TERM 1145 1130859 - 1130877 + g 71 -6.7 -4.15235 | gap 1, overlap 1130858 CGGCTGTGTCGCAAG CGGC-GCA AGAT TGCCGCCG TCTTTTTTCCCGATT Atu4019 1132124 - 1131471 - | two component response regulator Atu4020 1133837 - 1132191 - | hypothetical protein TERM 1146 1133120 - 1133089 - G 70 -3.5 -4.65895 | overlap 1133090 1133091 CCGTTGAGGGAAAAA TTCGCGGCGCGCG CGGTCT CGCCCGCAACGAT GACAGTGATGCGCGG TERM 1147 1133502 - 1133470 - G 100 -12.7 -4.54449 | opp_overlap 1133469 1133496 ATATGCCAGAGAAAA CCAGGCGTAATCAGA TTG CCTGCTTCCGCCTGG GTCGTTTCCATGGCG TERM 1148 1133695 - 1133678 - G 70 -3.3 -4.67048 | overlap 1133658 1133679 CCATGGCAAAATAAA GGGCTGC GATG GCAACCG GATAGGCGGAGAGAT TERM 1149 1134401 - 1134417 + r 73 -5.1 -4.57837 | GTCTCGTTTCCGGCT TGCCG ATGAGTG CGGCA TTTTTCCCGCAATCT Atu4021 1135458 - 1134547 - | LysR family transcriptional regulator TERM 1150 1135622 - 1135609 - H 90 -5.2 -5.24531 | ATTCTCCAGAAAAAA CCGC TTCAAG GCGG TGCGGGTGACGAAGG TERM 1151 1136500 - 1136512 + G 70 -4.8 -4.52857 | GCGGCCGGGCAACAT GCTG GATCG CAGC TTTTATGTCGGCGAT fhuA 1135646 - 1137778 + | hydroxamate-type ferrisiderophore receptor TERM 1152 1137833 - 1137854 + G 70 -3.5 -4.60889 | overlap 1137831 GGATCGATGGATGTC CCCCCTCTG GGGG CGGCGGGAG TTTTTGGGCATGCTT TERM 1153 1138309 - 1138321 + G 70 -4.7 -4.56597 | opp_overlap 1138299 TGCAAGCCATGCGGA CCCGC CTT GCCGG TTTTTCCGCACGCCC TERM 1154 1138671 - 1138726 + G 100 -12.5 -5.08088 | gap 1, opp_overlap 1138701 CGGTTTGCGCGGCTT CTGACCGAGGCCTTGACGGCACAGGG AGAAG CCCTGTGACGGCACGGCCTCTC-CAG TTTTTCTTCGGGCTT fhuD 1137828 - 1138709 + | ABC transporter, substrate binding protein (ferrichrome) TERM 1155 1139065 - 1139090 + G 73 -13.3 -2.82156 | gap 1, overlap 1139059 1139088 CGCATTGGTGGCGCT CGCTGG-CGCAG CTG CTGCGGCCGGCG TCGTCTTCCTTCTCG TERM 1156 1139417 - 1139433 + G 78 -6.5 -4.67982 | GCGGTCGCCGCCGTC GCGGTCA TGC TGGCTGC TTTTGTTGCATCCGC fhuB 1138706 - 1140670 + | iron-hydroxamate transporter permease subunit TERM 1157 1140733 - 1140747 + G 93 -5.6 -5.49569 | overlap 1140734 CGCCTGTGGTCACTT ACGACG ATA CGTCGC TTTTTTCTCTTGATG TERM 1158 1140734 - 1140746 + G 73 -9.1 -3.88115 | overlap 1140733 GCCTGTGGTCACTTA CGACG ATA CGTCG CTTTTTTCTCTTGAT TERM 1159 1141419 - 1141396 - g 72 -13.8 -2.52543 | ATTCCGGCCAACTGA TCGCCCGCGG AACG CCGCGGGAGA TCATGAACCCGAAGA fhuC 1140705 - 1141514 + | ABC transporter, nucleotide binding/ATPase protein (ferrichrome) Atu4026 1141762 - 1142289 + | hypothetical protein TERM 1160 1142299 - 1142321 + G 90 -14.9 -3.51365 | AATTGATTGGCGAAT TGCCCGGTG TTGTT CACCGGGCA TTCTGTCGCATGTCA TERM 1161 1142373 - 1142340 - g 84 -11 -4.13767 | opp_overlap 1142342, overlap 1142342 TGTCGCATGTCAAAA CACGCCCTCTTCGT TGTCAG ACGGAGAGGGCGTT GTATTATCCGGGCCA TERM 1162 1142342 - 1142371 + G 95 -16.5 -3.7511 | opp_overlap 1142342 1142340 TCGCATGTCAAAACA CGCCCTCTTCGTT GTCA GACGGAGAGGGCG TTGTATTATCCGGGC TERM 1163 1142371 - 1142342 - g 88 -13.6 -3.6692 | opp_overlap 1142342, overlap 1142340 TCGCATGTCAAAACA CGCCCTCTTCGT TGTCAG ACGGAGAGGGCG TTGTATTATCCGGGC TERM 1164 1142411 - 1142426 + G 74 -3.9 -4.7871 | opp_overlap 1142410 1142411 1142412, overlap 1142412 CGTATCCAAACAAAC TGCGG CTGCGA CCGCG TTTTTCCTCCTGCTT TERM 1165 1142584 - 1142599 + G 73 -10.4 -3.61517 | GGCCGATGGCGGCAG TGGCCG ATTA CGGCCA TTATTCGCAGGCGCT Atu4027 1142286 - 1142786 + | cytochrome c2 Atu4028 1143298 - 1142789 - | recombination regulator RecX Atu4029 1144370 - 1143450 - | gluconolactonase precursor TERM 1166 1144271 - 1144251 - G 70 -12.5 -2.92171 | overlap 1144248 1144253 TAGATCGGCAAACCA CACCGGGCC TTC GGCCCAGCG GCAGCCGGAATAAAG Atu4030 1145352 - 1144405 - | ABC transporter, membrane spanning protein (sugar) Atu4031 1146290 - 1145349 - | ABC transporter, membrane spanning protein (sugar) Atu4032 1147750 - 1146287 - | ABC transporter, nucleotide binding/ATPase protein (sugar) TERM 1167 1146626 - 1146641 + g 70 -3.2 -4.63527 | GCCCATATCAGGCGT GCGGAT TTCG ATGCGC TTTTTCCACTGATCG TERM 1168 1146964 - 1146974 + g 79 -8.2 -4.4595 | overlap 1146971 ACAGCACCTTTTCGC CCGC CTT GCGG TTTTCGCTTTTCTGC TERM 1169 1146971 - 1146981 + g 70 -4.6 -4.45485 | overlap 1146964 CTTTTCGCCCGCCTT GCGG TTT TCGC TTTTCTGCCTGTCCT TERM 1170 1147517 - 1147484 - G 74 -10.9 -3.55071 | gap 1, opp_overlap 1147505, overlap 1147487 CGACAGTTCCTGAAA CAC-GCAGCGCACGCC GCT GGCACGCGCGGCCGCG ATGCCTTGGCGGTTC TERM 1171 1147513 - 1147487 - G 72 -13.6 -2.60813 | opp_overlap 1147505, overlap 1147484 CAGTTCCTGAAACAC GCAGCGCACGCC GCT GGCACGCGCGGC CGCGATGCCTTGGCG TERM 1172 1147787 - 1147807 + r 71 -4.5 -4.56597 | opp_overlap 1147787 GAAAAAGGATAATAT CGGTGGCTG TTG CGGCGCCCG TTTTTAGGAGCGCCG Atu4033 1148869 - 1147853 - | ABC transporter, substrate binding protein (sugar) Atu8035 1149083 - 1148913 - | hypothetical protein TERM 1173 1149483 - 1149503 + G 84 -9 -4.56775 | TGCCTGTTCCGATCC GCGCTTTC ATTTC GAAGGCGC TTTTTCGAGCCCCAT Atu4034 1149178 - 1150413 + | two component sensor kinase TERM 1174 1150848 - 1150836 - g 85 -5.5 -5.14563 | GCCTTCAGGAAAAAA GCCTC GGC AAGGC GCATGGTTTTACCGA Atu4035 1150415 - 1151137 + | two component response regulator TERM 1175 1151140 - 1151185 + T 100 -13.5 -5.54907 | gap 1, opp_overlap 1151151, overlap 1151142 GGGGAGCCGCTGACC GCTAGAGCACATCCGCT-CT AAACGGA AGCGGCGGATGTGCTCTATC TTTTTGTTTTATCGC TERM 1176 1151142 - 1151183 + T 100 -14.7 -4.39746 | gap 1, opp_overlap 1151151, overlap 1151140 GGAGCCGCTGACCGC TAGAGCACATCCGCT-CT AAACGGA AGCGGCGGATGTGCTCTA TCTTTTTGTTTTATC Atu4036 1152261 - 1151245 - | DNA topoisomerase TERM 1177 1151606 - 1151651 + g 91 -13.9 -3.73968 | GAATGCACCCGGTTC TCGCTGTCCTGCCAGACAAAG AGTT CCTTGCCGGGCAGGTCGGCGA TTTCCTCGAGGATTT TERM 1178 1152327 - 1152302 - R 100 -9.7 -4.98531 | opp_overlap 1152302 1152304, overlap 1152296 GCGGCAAACGAAAAA CAGGCCGCC TTCGTTCC GGCAGCCTG TCGTTCCGATCACGA gcd 1153578 - 1152349 - | glucose dehydrogenase TERM 1179 1153459 - 1153442 - GR 70 -6.9 -4.07568 | opp_overlap 1153456 GTCTGGCCCTCAAAA GCCGGTT TCTG ATCCGGC GCATTCGGCCGTTTG Atu4038 1153651 - 1153436 - | hypothetical protein Atu4039 1153658 - 1153948 + | hypothetical protein Atu4040 1154575 - 1153949 - | hypothetical protein TERM 1180 1154551 - 1154561 + g 81 -5.4 -4.80178 | opp_overlap 1154546 CAACAAAATCCACCA CGAA ACT TTCG TTTTGTTCCTTCATC rluA 1155252 - 1154584 - | ribosomal large subunit pseudouridine synthase A Atu4042 1155779 - 1155303 - | hypothetical protein TERM 1181 1157078 - 1157054 - g 70 -12.9 -2.91322 | overlap 1157051 ACATGCTGGAAAGCA TCCCCGGCA TATTCGT TGCCGGGGA AATGCTGGACTGGGA Atu4043 1155832 - 1157187 + | hypothetical protein Atu4044 1158240 - 1157179 - | ABC transporter, nucleotide binding/ATPase protein (glycine betaine) TERM 1182 1157890 - 1157946 + g 81 -13.7 -3.33696 | opp_overlap 1157907 1157910 1157943, overlap 1157879 TCGATGCGGCAGCAG GCCGAATTTCTGGAATACCATCGCCGT CTT GTGGCGGCGGAATTCCAGAAGATCCGC TTCGTTGAGGCGACA Atu4045 1159120 - 1158233 - | ABC transporter, membrane spanning protein (glycine betaine) TERM 1183 1159174 - 1159141 - R 95 -14 -3.71848 | gap 2 GTTCTCCATGAAGAA CCGGAG-GCGG-GGAT CTAT ATCCTCCGCACTCCGG GAGTAAAATCGCCAG Atu4046 1160337 - 1159339 - | ABC transporter, substrate binding protein (glycine betaine) TERM 1184 1161354 - 1161366 + G 76 -6.9 -4.56597 | overlap 1161341 1161341 CAGCGTGCCCGACAT CGTCG GCG CGGCG TTTTTCGAAGCCCGC TERM 1185 1162070 - 1162055 - g 76 -10.4 -3.70902 | GTGTCGAGATGGAAA TGGCGG AGCG CCGCCA GACCGAAAAGGCGTT Atu4047 1160701 - 1163676 + | two component sensor kinase/response regulator hybrid TERM 1186 1163661 - 1163689 + T 87 -13.9 -3.29511 | gap 1, opp_overlap 1163658 1163659 TCATACGGCAAAGGC GACGG-GGGCGG AATAGG CCGCCCGCCGTC TTGTCGCCGGCTCAG Atu4048 1164645 - 1163701 - | 2-hydroxyacid dehydrogenase TERM 1187 1164760 - 1164741 - R 100 -11.4 -5.31275 | opp_overlap 1164740 1164741 CCCTAGCAGAAAAAA GGCCCGGT TTTC ACCAGGCC GTTTCATGATCAGGC exoP 1167163 - 1164770 - | exopolysaccharide polymerization/transport protein TERM 1188 1166259 - 1166304 + g 83 -16.9 -2.53911 | gap 1 ATAATCGATTTATAC TGGCTGTAGCGGGCAGATGCCG TGG CGGCATCCGCCTGC-GCAGCAA TCAGTTGGCCGTTAA TERM 1189 1167184 - 1167142 - G 100 -16.2 -4.8622 | opp_overlap 1167142 1167143, overlap 1167143 CTTGTGAATTAAAAA TGGTACGCGGGAAGCCGAGC ATC GCTCGCCTTCCCGCCTCCCG TTATCAGTGCGCCGG TERM 1190 1167142 - 1167184 + g 95 -18.4 -3.35679 | opp_overlap 1167142 1167143, overlap 1167143 CTTGTGAATTAAAAA TGGTACGCGGGAAGCCGAGC ATC GCTCGCCTTCCCGCCTCCCG TTATCAGTGCGCCGG TERM 1191 1167183 - 1167143 - G 100 -19.7 -3.5125 | opp_overlap 1167142 1167143, overlap 1167142 TTGTGAATTAAAAAT GGTACGCGGGAAGCCGAGC ATC GCTCGCCTTCCCGCCTCCC GTTATCAGTGCGCCG TERM 1192 1167143 - 1167183 + g 88 -19.7 -2.61264 | opp_overlap 1167143 1167142, overlap 1167142 TTGTGAATTAAAAAT GGTACGCGGGAAGCCGAGC ATC GCTCGCCTTCCCGCCTCCC GTTATCAGTGCGCCG exoN 1168131 - 1167226 - | UTP-glucose-1-phosphate uridylyltransferase TERM 1193 1167823 - 1167847 + g 80 -9.9 -4.11216 | overlap 1167826 CTGGCGCGTATAGCT GACGGTGCCGG CAA CCGGCAGCATC TTTTCCAGCTGCAGC TERM 1194 1168095 - 1168072 - G 74 -5.3 -4.56597 | opp_overlap 1168077 1168078 GGTGGCGGGCAAAAA CCGCGT-GCCG TTGC CGGCTAC-CGG AATGACGGCTTTTCT exoO 1169196 - 1168216 - | succinoglycan biosynthesis glycosyltransferase exoM 1170140 - 1169196 - | UDP-hexose transferase exoA 1171135 - 1170137 - | succinoglycan biosynthesis protein exoL 1172334 - 1171153 - | succinoglycan biosynthesis protein exoK 1173151 - 1172360 - | endo-1,3-1,4-beta-glycanase TERM 1195 1172667 - 1172685 + g 79 -14.6 -2.86343 | GGCACCAGCTTCTCA TTGCCGCC CTT GGCGGCAA TATACTGGTTGAGCT exoH 1174304 - 1173156 - | succinoglycan biosynthesis protein exoT 1176154 - 1174676 - | succinoglycan biosynthesis transport protein TERM 1196 1177102 - 1177081 - g 91 -7.9 -4.82901 | overlap 1177084 1177094 1177096 TGCTTCCTATAAAAA CACCGCCCG CAAA CAGGCGCTG TGGAGCCAGGCCGGC exoW 1176272 - 1177237 + | succinoglycan biosynthesis protein TERM 1197 1177572 - 1177545 - g 75 -2.7 -5.00616 | opp_overlap 1177566 1177567, overlap 1177546 TGCGGGGCGAAAAAA CCGCGGCG-AAGC TCGG GCTCGCGCC-CGA AAAGGGCATTGTCGA exoV 1177289 - 1178257 + | succinoglycan biosynthesis protein TERM 1198 1178454 - 1178434 - T 79 -12.6 -2.89267 | TGCAACGAGATTAGA TCCTCGGC ACAGG GCCGAGGA TGACGGCAGAGAGTT exoU 1179480 - 1178491 - | succinoglycan biosynthesis glycosyltransferase exoX 1179869 - 1179591 - | exopolysaccharide production repressor protein TERM 1199 1179905 - 1179919 + H 100 -3.4 -6.23545 | overlap 1179906 GATTTCTCCGTTTTT GGCTGC GCT GCGGCA TTTTTTTTCTTTGCA TERM 1200 1179906 - 1179918 + H 74 -6.9 -4.31687 | overlap 1179905 ATTTCTCCGTTTTTG GCTGC GCT GCGGC ATTTTTTTTCTTTGC Atu4062 1180214 - 1180480 + | hypothetical protein TERM 1201 1180489 - 1180546 + T 100 -23.7 -3.72576 | gap 1, opp_overlap 1180505, overlap 1180490 1180505 CCATTGAGGCGCTTT C-GGTGCCATTAAAAAAGCCGGCGGGTG ATA CACCCGCCGGCTTTTTTGTTCGTACCTG TTTGATCAGGAAGCG TERM 1202 1180490 - 1180544 + T 100 -27.4 -3.44848 | opp_overlap 1180505, overlap 1180489 1180505 CATTGAGGCGCTTTC GGTGCCATTAAAAAAGCCGGCGGGTG ATA CACCCGCCGGCTTTTTTGTTCGTACC TGTTTGATCAGGAAG TERM 1203 1180529 - 1180505 - T 100 -22.9 -5.14563 | opp_overlap 1180505 1180490 1180489 GGTGCCATTAAAAAA GCCGGCGGGTG ATA CACCCGCCGGC TTTTTTGTTCGTACC TERM 1204 1180505 - 1180529 + T 100 -22.9 -5.5112 | opp_overlap 1180505, overlap 1180490 1180489 GGTGCCATTAAAAAA GCCGGCGGGTG ATA CACCCGCCGGC TTTTTTGTTCGTACC Atu4063 1181448 - 1180552 - | O-linked GlcNAc transferase TERM 1205 1181549 - 1181521 - R 100 -13.8 -4.41609 | GACCACAAACACAAA GAGCGGTGGCGA ATTGA TCGCCCCCGCCC AACAAGCATTCAAAA TERM 1206 1181578 - 1181566 - R 76 -5.5 -4.71382 | ACAAGCATTCAAAAA CGTCC AAA AGACG ACCTATTAACGGCTC rpsU 1181811 - 1181584 - | 30S ribosomal protein S21 Atu4065 1182031 - 1181813 - | hypothetical protein TERM 1207 1181884 - 1181905 + g 72 -13.7 -2.57468 | opp_overlap 1181881, overlap 1181883 CAAACAAAAATGGTC CGTCCGGCT GGCG AGCCGGGCG ATTGGTGTGGTGCAA TERM 1208 1182245 - 1182271 + G 72 -11.5 -3.31726 | overlap 1182261 GTCATCATCATCGGC GGCGGCGGCCA CGGGT TGGGCGCTGCC TATTATCTGGCCAAG TERM 1209 1182843 - 1182828 - g 76 -6 -4.63218 | opp_overlap 1182838, overlap 1182829 TCGGCGCGAAGAAAA TCGGCG TCTC CGCCGC TGGCCATTCCTCGGT soxB 1182128 - 1183381 + | sarcosine oxidase beta subunit Atu4067 1183396 - 1183791 + | hypothetical protein TERM 1210 1183988 - 1183999 + G 71 -7.2 -4.15044 | CTGGCGTCACATTCA CGGC TGCG GCCG TTTCTTCAACGCCGC soxD 1183803 - 1184117 + | sarcosine oxidase delta subunit TERM 1211 1184464 - 1184487 + G 89 -5.2 -5.18726 | gap 1, overlap 1184486 CGCCGTCAACGACCT CCTGTCGCCGA TGT TCG-CGGCCGG TTTTTATTATAAGAC TERM 1212 1185172 - 1185151 - g 73 -5.1 -4.62069 | gap 1, overlap 1185132 1185152 1185165 CTTCGACCTGAAAAA GGCCGGCG TGAAGAT CGCCG-CC ATCGTCGATTGCCGC TERM 1213 1186483 - 1186493 + G 71 -8.2 -4.1413 | overlap 1186474 1186484 1186486 CAAGTTCTGCGGTGT GCCG ACG CGGC TTTTCCGCGTCTCTT TERM 1214 1186486 - 1186504 + G 72 -11.7 -3.34398 | overlap 1186474 1186483 1186484 GTTCTGCGGTGTGCC GACGCGG CTTTT CCGCGTC TCTTTCACCGGCGAA soxA 1184114 - 1187074 + | sarcosine oxidase alpha subunit TERM 1215 1187117 - 1187129 + G 70 -10.5 -3.54408 | overlap 1187114 GCTCGAGGATTTCCA CGGCG GTT CGCCG TTCGTTTCGCTGAAA soxG 1187067 - 1187621 + | sarcosine oxidase gamma subunit Atu4071 1188658 - 1187618 - | hypothetical protein TERM 1216 1187653 - 1187680 + g 73 -9.2 -3.86897 | gap 1, opp_overlap 1187661, overlap 1187656 ATTCCACCCATTGTC CATGGAAATCGGC CCG GCCGATCTCC-TG TTTATCGCCGGTGGG TERM 1217 1187656 - 1187678 + g 74 -12 -3.5241 | opp_overlap 1187661, overlap 1187653 CCACCCATTGTCCAT GGAAATCGGC CCG GCCGATCTCC TGTTTATCGCCGGTG nodN 1189169 - 1188681 - | nodulation protein N TERM 1218 1188732 - 1188750 + g 100 -7.3 -5.79588 | GCTGATGGTGGTCCA GCGGGCG GTGAG CGCCGGC TTTTTTTCGTTTTCG TERM 1219 1189123 - 1189137 + g 74 -7 -4.41348 | overlap 1189125 GAAACACCCATTTCC GTGCCG ACG CGGCCC TTTATTTCCGCCAGC glgX 1191179 - 1189224 - | glycogen debranching enzyme TERM 1220 1190606 - 1190635 + g 90 -4.9 -5.44119 | CGATCCAGGCGGTAA TCGGCATCAATTC CACA GCATCGACGCCGA TTTTTTTCAAATGCG exoC 1192912 - 1191284 - | phosphoglucomutase glgA 1194359 - 1192917 - | glycogen synthase TERM 1221 1192949 - 1192969 + g 77 -3.2 -5.00616 | gap 1, opp_overlap 1192949 1192938 TAAGCTGGCTATAAA GCGCGGCGT AGAG AC-CGGCGC TTTTTTCCCAGGAAA TERM 1222 1194276 - 1194315 + g 74 -12.8 -3.14564 | gap 1 ATGGGCTTCGAGCGC GA-TGGGGAGCGCGCCGAC AAC GTCGGCGAGCCCTCCGGTC TTGATCAGGGGATAA glgC 1195627 - 1194365 - | glucose-1-phosphate adenylyltransferase TERM 1223 1195046 - 1195064 + g 89 -11.6 -4.1899 | TTCATTGCCGGGAAT GCCGGGCG GAT CGGCCGGC TTTTCGATGAAGTCG TERM 1224 1195070 - 1195090 + g 75 -2.5 -4.87291 | overlap 1195068 ATCGGCCGGCTTTTC GATGAAGTC GAT GATCTCGTC TTTTTCGTTCACATG TERM 1225 1195535 - 1195516 - G 78 -7.1 -4.64861 | gap 1, opp_overlap 1195529, overlap 1195512 TGCCGCCAAAATAAA CCG-CGGG TTTTG CCCGGCGG TCCGTCAGTTCCTTC glgB 1197856 - 1195649 - | glycogen branching enzyme TERM 1226 1197687 - 1197663 - G 85 -12.9 -3.73072 | AATTCGCCCACGAAA TTTCCGTCCAG CGT CAGGACGGAAA CCTCCTCGGCACCGG TERM 1227 1197756 - 1197725 - G 95 -15.3 -4.08394 | gap 1, opp_overlap 1197716, overlap 1197714 ACAGCGGGCGGAAAA CCCTTC-CGGCGTT TCGTG AACGCCGAGAAGGG CAAAGGGATTGGAGT glgP 1200318 - 1197856 - | glycogen phosphorylase TERM 1228 1199056 - 1199083 + g 71 -5.7 -4.32402 | gap 2, overlap 1199054 1199061 TTCATCGATCAGCGA GATCGAGCGGATC TGCT GATCCGC-C-ATC TTCTTTTCCTTGCGG Atu4079 1200453 - 1200728 + | hypothetical protein TERM 1229 1200787 - 1200736 - T 72 -3.7 -4.78077 | gap 3, overlap 1200737 1200738 TTCAATGAAAATAAA TGGGTGTTCGCCGCAGCCGC-ACCGA TCC CCGGCGGCTGCTGCG-CGAA-ACCGG GCGATATTAACGTGT Atu4080 1201573 - 1200803 - | glutamine amidotransferase TERM 1230 1201452 - 1201464 + g 84 -5.5 -4.87291 | overlap 1201450 AGGCCGCAGCCATCG CCGTT GAC GACGG TTTTTGCTTCCCGTG Atu4081 1202287 - 1201574 - | aspartate racemase TERM 1231 1202330 - 1202352 + H 77 -4.1 -5.03747 | gap 1, opp_overlap 1202325, overlap 1202330 AGACAAGAATGCCAT CGC-CGCC ACGAAAAC GGCGTGCG TTTTTTCGGGGATTT Atu4082 1202455 - 1202916 + | AsnC family transcriptional regulator Atu4083 1203918 - 1202935 - | putative aldose epimerase TERM 1232 1203878 - 1203863 - G 70 -4.7 -4.56775 | overlap 1203876 ATCTCGGCGCAAAAA CCGTT GCCGGA AACGG TCAGACCGGCAATCC garR 1204950 - 1204057 - | 2-hydroxy-3-oxopropionate reductase TERM 1233 1204909 - 1204932 + g 74 -5.8 -4.52415 | overlap 1204899 1204898 GATCGCGCCGCCCAT GGCGCCCGCG CCGA TGAGGGCGAC TTTATTCTTCTCGGT TERM 1234 1204991 - 1205035 + r 86 -10.5 -4.07568 | overlap 1204992 GTCGTGGTATCGTCA GGTCGCATCCGGATGGCGGCC GTG GCCCACCATCCGGAAACGGCA TTTTAAAGCGAGGCG TERM 1235 1204992 - 1205034 + r 91 -14 -3.04398 | overlap 1204991 TCGTGGTATCGTCAG GTCGCATCCGGATGGCGGCC GTG GCCCACCATCCGGAAACGGC ATTTTAAAGCGAGGC idnO 1205793 - 1205038 - | gluconate 5-dehydrogenase Atu4087 1206009 - 1207040 + | zinc-binding dehydrogenase TERM 1236 1207077 - 1207102 + F 100 -16.9 -5.28778 | ATTAGCTATTTTCAA TCGGTGGCGGA TAAT TCCGCCGCCGA TTTTTTATGCATGGT TERM 1237 1207698 - 1207679 - g 81 -7.8 -4.63527 | CGAGGAGCGGAAAAA GCGCGAGA TCGA TCCCACGC TCAGCGTGCTGCGCG Atu4088 1207368 - 1207946 + | transcriptional regulator TERM 1238 1208096 - 1208086 - f 78 -6.8 -4.57837 | AGACCGCGGTAAAAA CGCA ACA TGCG CCCGCGGTTGGCAGA TERM 1239 1208163 - 1208174 + F 77 -7.2 -4.27316 | overlap 1208153 TGGCTGCCGCAGGCG GGCC TGCT GGCC TTTTCAGTTGGAAAA TERM 1240 1208307 - 1208277 - g 76 -7.5 -4.56597 | gap 1, opp_overlap 1208277, overlap 1208278 1208279 GCGTGGCTGGAAAAA GTCGCGGCGCGG CTGTCCTT CCGGGCCGCG-C GCGCAGCACTTTCGC cydD 1208208 - 1209734 + | ABC transporter, nucleotide binding/ATPase protein TERM 1241 1209878 - 1209918 + G 95 -16.1 -3.78962 | GGCTGGTTCATCACC GCGACGGCCATTGCCGG CCTGCTA CCGGCGACGGCCTTCGC TTTCGATGTCTTTGC cydC 1209731 - 1211422 + | ABC transporter, nucleotide binding/ATPase protein cydA 1211490 - 1213067 + | cytochrome d oxidase cydB 1213074 - 1214231 + | cytochrome d oxidase subunit II Atu8036 1214271 - 1214393 + | protein YBGT-related protein TERM 1242 1214435 - 1214409 - T 100 -17.3 -4.8622 | opp_overlap 1214409 CGCTTGAAGCAAAAA GGGCGGCACCC GGTCT GGATGCCGCCC TTCGTGTGAAACAGC TERM 1243 1214409 - 1214435 + T 100 -15.8 -3.25823 | opp_overlap 1214409 CGCTTGAAGCAAAAA GGGCGGCACCCG GTC TGGATGCCGCCC TTCGTGTGAAACAGC Atu4093 1214657 - 1214469 - | hypothetical protein Atu4094 1215099 - 1214680 - | hypothetical protein Atu4095 1215363 - 1215112 - | hypothetical protein nadC 1216366 - 1215509 - | nicotinate-nucleotide pyrophosphorylase TERM 1244 1215978 - 1216002 + g 70 -4.1 -4.62069 | overlap 1215980 CAGGCGACCGACGCT TTGGTGCCGGC AAT GGCGGCGACGA TTTTTGCGGTGACGG nadB 1217936 - 1216368 - | L-aspartate oxidase TERM 1245 1216564 - 1216538 - G 76 -8.7 -4.08216 | opp_overlap 1216563 GCAGGGCTGCGAAAA CGGCGATGG AGAGAGCGA CCACCGCCG GGTCGGAGGCCGGGC nadA 1218970 - 1217933 - | quinolinate synthetase Atu4099 1219876 - 1218974 - | hypothetical protein TERM 1246 1219910 - 1219928 + H 70 -9.6 -3.33815 | overlap 1219896 TGGCTGCGGTATCAG CCTTCTTG GCA CAGGAAGG TTGCTTCGCCAACAT Atu4100 1219969 - 1220457 + | hypothetical protein Atu4101 1220530 - 1221033 + | hypothetical protein TERM 1247 1221322 - 1221291 - T 100 -12.9 -5.37345 | opp_overlap 1221290 1221289 TGCAAGCATAAAAAA CGGCCCGGCGTCA TTTTTT TGTCGTCGGGCCG AATTATCAAGTAAAA Atu8037 1221727 - 1221338 - | hypothetical protein TERM 1248 1222458 - 1222446 - g 85 -6.2 -5.0538 | overlap 1222447 1222448 GCCGAGGTGAAAAAA CGCG ACGAG CGCG ACATGGGCCGCGCCG cmk 1221954 - 1222586 + | cytidylate kinase rpsA 1222756 - 1224456 + | 30S ribosomal protein S1 TERM 1249 1224483 - 1224504 + T 100 -17.3 -5.45652 | opp_overlap 1224483 TTTTGACATGAAGAA CCCGCCGGA ATTT TCCGGCGGG TTTTTTATTGGCCGT TERM 1250 1224504 - 1224483 - T 100 -17.3 -3.7732 | opp_overlap 1224483 TTTTGACATGAAGAA CCCGCCGGA ATTT TCCGGCGGG TTTTTTATTGGCCGT Atu4105 1226097 - 1224556 - | hypothetical protein TERM 1251 1226206 - 1226192 - R 73 -5.6 -4.62471 | opp_overlap 1226198 TTGAATGTTGAAAAA TCGCCG CGC CGGTGA TGTACAGGTGTCATC Atu4106 1226665 - 1226357 - | hypothetical protein TERM 1252 1226705 - 1226722 + r 86 -6.9 -5.06816 | overlap 1226706 TCAAGTGACGTCGCA AGCGGCA ATCA TGCCGCC TTTTTCTTCAGCAGT TERM 1253 1226706 - 1226721 + r 76 -10.4 -3.63367 | overlap 1226705 CAAGTGACGTCGCAA GCGGCA ATCA TGCCGC CTTTTTCTTCAGCAG Atu8196 1227942 - 1226713 - | hypothetical protein TERM 1254 1226803 - 1226817 + g 85 -5.6 -5.07053 | GTCTTTAACGAGCCC CTGCGC ATC GAGCAG TTTTTTGGCCTCGTT rnd 1228653 - 1228027 - | ribonuclease D Atu4109 1228724 - 1229413 + | hypothetical protein sdh 1229427 - 1230176 + | serine dehydrogenase TERM 1255 1230256 - 1230240 - g 73 -5.1 -4.67353 | overlap 1230241 CGAGCTATGCAAAAA TGCAATG CTG CATTGCG AGACTTGCTCTGGAA TERM 1256 1230384 - 1230411 + G 100 -11.3 -5.1417 | opp_overlap 1230377 CCGATCAAGTTTGAA GCCTGCCGC ACCTCCTCCC GCGGCAGGC TTTTTCCTTTTCTGG Atu4111 1230231 - 1230494 + | hypothetical protein TERM 1257 1231901 - 1231873 - g 90 -14.5 -3.53031 | opp_overlap 1231872 1231869, overlap 1231869 CCCACCGGAAACGAA CCTCGACCGGCTG TTT CAGCCGGTCGCCG GGTAATTGGTCGGAA Atu4112 1230719 - 1231906 + | proline dipeptidase TERM 1258 1231956 - 1231931 - f 83 -12.5 -3.24289 | overlap 1231924 AGGCGAAAGACCGAA CGGCGACACGG GTTT CCGCGTCGTCG CTGACCAGAAGAGGT dppA 1232024 - 1233628 + | ABC transporter, substrate binding protein (dipeptide) TERM 1259 1233677 - 1233639 - f 100 -16 -3.97019 | opp_overlap 1233642, overlap 1233640 AGTAATCCCAAACAA CTGGACGCGCGGAAGAAC CCT GTTCTTCCGCGCGTCTTT TCAGGAAAAAACCAT TERM 1260 1233676 - 1233640 - f 100 -19.5 -2.97489 | opp_overlap 1233642, overlap 1233639 GTAATCCCAAACAAC TGGACGCGCGGAAGAAC CCT GTTCTTCCGCGCGTCTT TTCAGGAAAAAACCA TERM 1261 1233642 - 1233674 + F 100 -26.5 -4.07568 | opp_overlap 1233640 1233639 AATCCCAAACAACTG GACGCGCGGAAGAAC CCT GTTCTTCCGCGCGTC TTTTCAGGAAAAAAC dppB 1233691 - 1234698 + | ABC transporter, membrane spanning protein (dipeptide) dppC 1234695 - 1235609 + | ABC transporter, membrane spanning protein (dipeptide) dppD 1235613 - 1236452 + | ABC transporter, nucleotide binding/ATPase protein (dipeptide) dppF 1236449 - 1237294 + | ABC transporter, nucleotide binding/ATPase protein (dipeptide) TERM 1262 1237322 - 1237347 + T 100 -15.5 -4.62069 | opp_overlap 1237326 1237327, overlap 1237327 GAACGATCAACAGTC GAAAGGGCCGG ATTT CCGGCCTTTTC TTTTTCGGCTCAGCC TERM 1263 1237327 - 1237342 + T 100 -11.8 -5.27023 | opp_overlap 1237327 1237326, overlap 1237322 ATCAACAGTCGAAAG GGCCGG ATTT CCGGCC TTTTCTTTTTCGGCT TERM 1264 1237342 - 1237327 - T 72 -11.8 -2.80028 | opp_overlap 1237322 1237327, overlap 1237326 ATCAACAGTCGAAAG GGCCGG ATTT CCGGCC TTTTCTTTTTCGGCT Atu4118 1238031 - 1237357 - | GntR family transcriptional regulator TERM 1265 1238097 - 1238084 - H 72 -2.5 -4.87626 | opp_overlap 1238084 GCTGAATATTAAAAA TAAAA AATT TTTTA TTTTACAAAGATCGT TERM 1266 1239317 - 1239303 - g 73 -9.2 -3.86015 | GACGGTGTCTACAAA CGGCCG GAG CAGCCG GGCGCTAGCACCACG Atu4120 1238259 - 1239377 + | mandelate racemase TERM 1267 1239405 - 1239383 - T 100 -16.3 -5.95539 | opp_overlap 1239376 1239383 GGTGAAATAAAAAAA GGCGGCGCA GAGAA TGCGCCGCC TTACTCATTTCGAGA TERM 1268 1239383 - 1239405 + T 100 -16.3 -3.32769 | opp_overlap 1239383, overlap 1239376 GGTGAAATAAAAAAA GGCGGCGCA GAGAA TGCGCCGCC TTACTCATTTCGAGA Atu4121 1240451 - 1239429 - | monooxygenase TERM 1269 1240429 - 1240443 + g 78 -4.2 -4.77036 | GTCCAGTGGCCGAAG GATAGG AAT CCGATC TTTTTCATGATGACC Atu4122 1241505 - 1240588 - | LysR family transcriptional regulator TERM 1270 1241554 - 1241538 - H 73 -5.1 -4.56775 | opp_overlap 1241527, overlap 1241524 1241539 AGTTCTGTTCAAAAA TGAACAG TTC CTGTTCG CAATTTGATGATGCC TERM 1271 1242913 - 1242902 - g 85 -7.2 -4.85599 | TGGACCCCACAAAAA GCGG TTGC CCGC TGGTGAAACAATAAA Atu4123 1241719 - 1242927 + | ABC transporter, substrate binding protein (branched chain amino acid) TERM 1272 1243091 - 1243078 - g 79 -8.1 -4.56597 | CGCGGCCGTGAAAAA CGTCG ATCT CGACG TCCATCATGCCCGCG TERM 1273 1243475 - 1243438 - g 85 -4 -5.41143 | opp_overlap 1243416 1243414 1243438 1243439, overlap 1243439 1243440 CACGCGGGAAAAAAA TGCGCTTGCGGCCG ATCTGTCTTA CGGTCGCAAGCGGG TTCTCGAAATCGCCA Atu4124 1242956 - 1243762 + | ABC transporter, nucleotide binding/ATPase protein (branched chain amino acid) Atu4125 1243764 - 1244465 + | ABC transporter, nucleotide binding/ATPase protein (branched chain amino acid) Atu4126 1244468 - 1245355 + | ABC transporter, membrane spanning protein (branched chain amino acid) Atu4127 1245357 - 1246364 + | ABC transporter, membrane spanning protein (branched chain amino acid) Atu4128 1246439 - 1248034 + | GMC type oxidoreductase TERM 1274 1248423 - 1248466 + G 70 -5.1 -4.56597 | gap 1, overlap 1248446 GGCACCAGCGGGGCG GCGGCCGGCACCCTGACC TTCATGTGC GG-CGGCGAGCCGGACGC TTTTTCGGCGGCAAG mmsB 1248048 - 1248932 + | 3-hydroxyisobutyrate dehydrogenase TERM 1275 1248985 - 1248995 + G 75 -2.4 -4.98531 | GCGGGAAAGGCTGGA GCAC TCG GCGC TTTTTGCTTTCGCGG TERM 1276 1250306 - 1250327 + G 74 -10.9 -3.48593 | gap 1, opp_overlap 1250297 GATGAAGGCCGTTCC GTTC-GCGGC GTC GCCGCTGAAC TTGTCTGCCGCAATG acsA 1248929 - 1250884 + | acetoacetyl-CoA synthetase TERM 1277 1250922 - 1250908 - g 75 -2.8 -4.90869 | AGGATCAACCAAAAA CCGT GCTCGTT ACGG GTTCCACCAGCGGCA Atu4131 1250889 - 1251674 + | hydroxybutyrate dehydrogenase TERM 1278 1252557 - 1252569 + G 80 -10.5 -4.13728 | CTATCGGCTGTTCGA GCCGC TTG GCGGC TTTTCGGCCTGTATC TERM 1279 1252723 - 1252713 - g 70 -4.6 -4.56597 | CCGCGTCTTTAAAAA GACC TTC GGCC TCTCCCCGCGCCAGA Atu4132 1251793 - 1252836 + | AraC family transcriptional regulator Atu4133 1252868 - 1253164 + | hypothetical protein TERM 1280 1253327 - 1253308 - g 73 -4.2 -4.63218 | overlap 1253309 CCGTCTGGAACAAAA CCCTATCC CGGA GGATTAGG TCCCAAACGGTTACA Atu4134 1253290 - 1253697 + | hypothetical protein TERM 1281 1253745 - 1253784 + F 83 -10.1 -4.13995 | gap 1, overlap 1253774 TATGGAACCAGATTG CGCCCGATTCCATTTCAC ACAAA GTGACA-GGAATCGGGGG TTTCATTTATGGCAG TERM 1282 1253854 - 1253882 + G 77 -3.1 -4.94147 | gap 1, overlap 1253852 CGCTGTTCGGCTTCG GCTCTCAGCTCG TCATGT TGGGC-GGGAGC TTTTATTATCTTCTT gcd 1253793 - 1256129 + | glucose dehydrogenase TERM 1283 1256178 - 1256157 - T 100 -14.5 -5.64274 | opp_overlap 1256157 TCACGCACAAAAAAA CCGGAATGG GTGA CCATTCCGG TTTTTTGTTTTGGCT TERM 1284 1256157 - 1256178 + T 100 -14.5 -5.80951 | opp_overlap 1256157 TCACGCACAAAAAAA CCGGAATGG GTGA CCATTCCGG TTTTTTGTTTTGGCT TERM 1285 1256190 - 1256210 + T 70 -3.1 -4.82901 | CCGGTTTTTTGTTTT GGCTGTGCA CCT TACGCCGCC TTTTTCTCAGCGGCG Atu4136 1256701 - 1256201 - | hypothetical protein Atu4137 1256875 - 1257360 + | hypothetical protein Atu4138 1258593 - 1257367 - | oxidoreductase TERM 1286 1257769 - 1257783 + g 83 -4.2 -5.14563 | GCTCTCCAGCCAGTC GGGC AGATCGA GCCC TTTTTTGCTCGCCAG Atu4139 1259023 - 1258613 - | hypothetical protein Atu4140 1259891 - 1259031 - | hypothetical protein TERM 1287 1259932 - 1259945 + r 73 -5.2 -4.65263 | CGCGATGGCGTTTTT CCGG TTCCGT CCGG TTTATTTTGCAGGAT Atu4141 1260387 - 1259947 - | hypothetical protein TERM 1288 1260182 - 1260152 - G 72 -14 -2.62983 | opp_overlap 1260146 1260179 TCCAGCGTGATATCA CCGAGCAGGGTCAG GAC CTCACTCTGCTCGG CGACCGGTATTTCCT TERM 1289 1260238 - 1260226 - G 74 -3.3 -4.74706 | overlap 1260227 CTTAAGATCGAAAAA TGCGA GCG TCGCG GTTGCAAAGGCGCCG TERM 1290 1260428 - 1260406 - R 100 -20.6 -5.40072 | opp_overlap 1260401 1260425 GTTCTCCCAAAAAAA GTGCCGCCGG AAG CCGGCGGCAC GACAATGTGCTGGTA pfpI 1261006 - 1260446 - | proteinase TERM 1291 1260675 - 1260661 - G 72 -11.4 -3.40403 | CCGCTTCGATGAGAA GCCACG GCG CGTGGC AGATGGCGGCAACGA Atu4143 1261246 - 1261025 - | hypothetical protein TERM 1292 1261348 - 1261336 - g 71 -5.5 -4.38712 | opp_overlap 1261323 GCCACCGGGAGAAAA CGGAA AAA TCCCG GTGTTCTTCAGCACC Atu4144 1261290 - 1261481 + | hypothetical protein TERM 1293 1262032 - 1261989 - g 79 -14.4 -2.85712 | gap 1, overlap 1261986 GCACAGCTACAATCA CCGCCGCCAGGG-TGCCGGCG AGC CGCCGACTGCCCAGGCGGAAG CACCGGATATCAATA Atu4145 1261534 - 1262358 + | hypothetical protein TERM 1294 1262548 - 1262534 - g 76 -5.6 -4.72272 | CGGGGGTACGAAAAA TCTCGC CGC GCGCGA TATCGCCGCCGCCCA TERM 1295 1262623 - 1262642 + G 82 -15 -3.17054 | overlap 1262636 TGATCGAGGCTGTCG GCGCTGCC ATGC GGCAGCGC TTCGGTGCTTTCATC TERM 1296 1262779 - 1262769 - g 72 -2.4 -4.81249 | opp_overlap 1262771, overlap 1262771 CCGGAAACGCAAAAA GCCC GCC GGGT TTTCATCAAGGCGGT TERM 1297 1264102 - 1264154 + G 100 -12.7 -5.06414 | gap 1 AACATTTTCCGGTCA TGCAGGAGCTGGCCTTGCGCGGCC TGTTAC GGCCGCCTGGGGTCAGG-CCTGCA TTTTTATTGCCCGCC Atu4146 1262358 - 1264235 + | hypothetical protein TERM 1298 1264247 - 1264257 + G 85 -6.8 -4.77157 | ATAGGAGGGGCTTCA TGCG TAT CGCA TTTTTCGTCAATTCC gshB 1264246 - 1265292 + | glutathione synthetase lspL 1266312 - 1265293 - | UDP-glucuronic acid epimerase TERM 1299 1265891 - 1265903 + g 84 -3.3 -5.26875 | TCGGCCTTGTCGCTT TCCGC AAA GGGGA TTTTTTCATTGGCGC ugdH 1267730 - 1266399 - | UDP-glucose 6-dehydrogenase TERM 1300 1266745 - 1266784 + g 89 -10.8 -4.63218 | gap 1 GGGCTGTCGCGCATG TCGTCAGTGTTCGGCTTGA AGG TCAGGCCCAGCAC-GGCGA TTTTCTTGCCGCGCA TERM 1301 1267949 - 1267962 + H 87 -8.1 -4.62471 | CAGCTGCGTCCAATC CGGCA ATTT TGCCG TTTTTGCGGCTTGCA Atu4150 1268112 - 1268999 + | hypothetical protein gcvA 1269935 - 1269033 - | LysR family transcriptional regulator TERM 1302 1269244 - 1269220 - G 79 -9.2 -4.21936 | overlap 1269213 1269221 GGCAGAAGGGCAAAA CCGATGCCGC TTGCG GCGGCCTCGA TGATCATCGAAAACT Atu4153 1270148 - 1271677 + | aldehyde dehydrogenase TERM 1303 1271704 - 1271726 + F 100 -14.1 -4.55128 | overlap 1271705 GACGATTGATGTATA TGCCGGCGC CGCGT GCGCCGGCG TTTTCGTTTGGGGCT TERM 1304 1271705 - 1271725 + F 95 -15.4 -3.32354 | overlap 1271704 ACGATTGATGTATAT GCCGGCGC CGCGT GCGCCGGC GTTTTCGTTTGGGGC TERM 1305 1272033 - 1272022 - g 76 -7.2 -4.46212 | opp_overlap 1272022, overlap 1272008 1272005 1272023 TCGGTTATCAGAAAA CCGG CCTG CCGG TTATCGCAAGGCAGC Atu4154 1271907 - 1272860 + | ABC transporter, substrate binding protein (aliphatic sulfonate) TERM 1306 1273276 - 1273288 + G 85 -6.9 -4.72846 | overlap 1273273 GAAGCTCTTTCTCGT CGCGC TCG GCGTG TTTTTCCCTATCTAC Atu4155 1272881 - 1273663 + | ABC transporter, membrane spanning protein (aliphatic sulphonate) Atu4156 1273672 - 1274502 + | ABC transporter, nucleotide binding/ATPase protein (aliphatic sulfonate) TERM 1307 1274504 - 1274536 + T 70 -9.9 -3.35775 | gap 1, opp_overlap 1274503 1274502, overlap 1274502 TTACCGGACAATAGG TGGT-ACGGCAGGG CCGAGA CCCTGCCGGGACCA TGTTTAGCCAATGCT putA 1278226 - 1274540 - | bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase TERM 1308 1275207 - 1275163 - G 71 -7.9 -4.03234 | gap 3, overlap 1275196 TGCGGCCGAGATAAA GCGGACCGCCGGCC-TTGGGGC CGGT GCCGGAAAGGCCG-CG-TCCGC CAAAGGGCTGCACAC TERM 1309 1276570 - 1276580 + g 72 -2.4 -4.74103 | CATTGGAGAGGTCGA CGCC GGC GGAG TTTTTCCGTTCCGGG TERM 1310 1278431 - 1278421 - g 90 -5.4 -5.18561 | CAAACAGTCAAAAAA CAGA CGG TCTG GATCACTTCGATCTC putR 1278402 - 1278872 + | AsnC family transcriptional regulator TERM 1311 1278887 - 1278916 + T 95 -15.1 -3.51597 | opp_overlap 1278876 1278891, overlap 1278891 AAAAGCGGATATGGA TAAACGGGCAGAC GCAA GTCTGCCCGTTCA TTGTCATTGCCAGTT TERM 1312 1278891 - 1278912 + T 100 -15.9 -3.5002 | opp_overlap 1278891 1278876, overlap 1278887 GCGGATATGGATAAA CGGGCAGAC GCAA GTCTGCCCG TTCATTGTCATTGCC TERM 1313 1278912 - 1278891 - T 100 -15.9 -3.95073 | opp_overlap 1278887 1278891, overlap 1278876 GCGGATATGGATAAA CGGGCAGAC GCAA GTCTGCCCG TTCATTGTCATTGCC Atu4160 1279506 - 1278940 - | RNA polymerase sigma factor Atu4161 1279712 - 1279506 - | hypothetical protein TERM 1314 1279784 - 1279763 - H 100 -8.7 -5.40072 | opp_overlap 1279765, overlap 1279765 GCGCGGTTAAAAAAA TAGTTCCGG CGGT CCGGAACTT TTTTTGCGATACACA TERM 1315 1279765 - 1279782 + H 100 -11.3 -5.44119 | opp_overlap 1279765 1279763 GCGGTTAAAAAAATA GTTCCGG CGGT CCGGAAC TTTTTTTGCGATACA TERM 1316 1279782 - 1279765 - H 91 -11.3 -4.34482 | opp_overlap 1279765, overlap 1279763 GCGGTTAAAAAAATA GTTCCGG CGGT CCGGAAC TTTTTTTGCGATACA TERM 1317 1280107 - 1280096 - g 76 -7.2 -4.56597 | overlap 1280098 TCCGGCTGGGAAAAA CGCG CCTC CGCG AACCTCTCCGCCGTG Atu4162 1279850 - 1280644 + | two-component response regulator TERM 1318 1280706 - 1280726 + F 73 -8.9 -3.85817 | GCGTTGGCGGTTATG GTCGTGGGG CTT TCCCGCGGC TTTCTGCAAGGAGAT TERM 1319 1281519 - 1281533 + G 70 -3.5 -4.68593 | GATCTCTCTCCAGTG TCGCC AGGAC GGTGA TTTTTACATCGTCGA Atu4163 1280740 - 1281729 + | two component sensor kinase TERM 1320 1281792 - 1281819 + T 85 -6.9 -4.84017 | opp_overlap 1281794, overlap 1281794 CGAAATCAACAAAAA AAGCACGGCCC ATTACA GAGCCGTGCTA TTTTTATGACGGGTT TERM 1321 1281794 - 1281817 + T 80 -9.5 -4.03995 | opp_overlap 1281794, overlap 1281792 AAATCAACAAAAAAA GCACGGCCC ATTACA GAGCCGTGC TATTTTTATGACGGG TERM 1322 1281817 - 1281794 - T 100 -11.7 -5.9003 | opp_overlap 1281792 1281794 AAATCAACAAAAAAA GCACGGCCC ATTACA GAGCCGTGC TATTTTTATGACGGG Atu4164 1283729 - 1281990 - | two component sensor kinase TERM 1323 1282159 - 1282208 + g 89 -10.7 -4.58685 | gap 1, opp_overlap 1282187 CTCGGCTCAGTTGCG GGCGGCCCGCCGGT-CTCCGTC CAGACCA GATGGAGCATCTGCCGGCCGTC TTTTTCGAGCGCTTT TERM 1324 1283661 - 1283647 - G 84 -5.6 -5.00616 | overlap 1283649 GCCGTCGGGAAAAAA TTGGCG CTG CGCCGA CGCAAAGCCGAAATC TERM 1325 1283769 - 1283782 + H 79 -3.1 -5.22943 | overlap 1283766 GCGCGCTGTCGTCCG TTAGC AATG GCTGA TTTTTTACCTTTGGT TERM 1326 1284501 - 1284465 - g 71 -7.1 -4.21812 | overlap 1284466 1284494 GGCCAGCGAAAAGAA TGCGGCAGTGCCGGCCG CCC CTGACAGCACGACCACA TCGGCAACCAAGCCT Atu4165 1283944 - 1284519 + | hypothetical protein TERM 1327 1284575 - 1284596 + T 100 -17.3 -5.48063 | opp_overlap 1284578 AGTCGTCCCGCGAAG GCACCGGCC ATTT GGCCGGTGC TTTTTTGTGTTGGCT TERM 1328 1284593 - 1284578 - T 71 -11.8 -2.52464 | opp_overlap 1284575 CGTCCCGCGAAGGCA CCGGCC ATTT GGCCGG TGCTTTTTTGTGTTG galE/exoB 1285607 - 1284621 - | UDP-glucose 4-epimerase TERM 1329 1285718 - 1285756 + r 86 -10.3 -4.18018 | opp_overlap 1285724, overlap 1285724 TCGCCGGTAACATAA AAAAAACCGCGCATCCA TGGCC TGGATGCGCGGTTTGCC TTTTGCGTGCCGCCA TERM 1330 1285724 - 1285750 + r 100 -18.1 -3.9373 | opp_overlap 1285724, overlap 1285718 GTAACATAAAAAAAA CCGCGCATCCA TGGCC TGGATGCGCGG TTTGCCTTTTGCGTG TERM 1331 1285750 - 1285724 - R 100 -18.1 -6.10295 | opp_overlap 1285718 1285724 GTAACATAAAAAAAA CCGCGCATCCA TGGCC TGGATGCGCGG TTTGCCTTTTGCGTG Atu4167 1286214 - 1285777 - | hypothetical protein Atu4168 1286665 - 1286219 - | hypothetical protein TERM 1332 1286726 - 1286763 + H 74 -4.7 -4.75288 | opp_overlap 1286750, overlap 1286727 CTTCACCGGCATTTC CGGTCGGGGGCGATTTT CGAG GAATTCGACCCCGAACA TTTGTTTTCCTGTCA TERM 1333 1286951 - 1286923 - g 76 -6.7 -4.57073 | opp_overlap 1286903 1286922, overlap 1286904 1286925 TATGTGCGGGAAAAA TCCGGCGCCAA GGCACTG TTGGCGCTGAA ATGCTTCGCCACATG nspC 1286842 - 1287939 + | carboxynorspermidine decarboxylase TERM 1334 1288184 - 1288157 - g 83 -4.2 -5.09259 | TACGCGAAAAGAAAA GCCTCAAG ACAGATGTGAAA CTTGAGGC CCATGCGCTTGACGC Atu4170 1288000 - 1289238 + | hypothetical protein TERM 1335 1289288 - 1289271 - T 100 -14.1 -5.4492 | opp_overlap 1289271 GATAGAGACAAAAAA GCCCCGC GAAA GCGGGGC TTTTTTCTTGGCTTT TERM 1336 1289271 - 1289288 + T 100 -14.1 -5.52096 | opp_overlap 1289271 GATAGAGACAAAAAA GCCCCGC GAAA GCGGGGC TTTTTTCTTGGCTTT TERM 1337 1289391 - 1289411 + T 76 -12.6 -2.73875 | opp_overlap 1289391, overlap 1289388 CCAGTAGGTAGCAGA TCCTCGGG ACAAG CCCGAGGA TGATGTTGAGAGCAG TERM 1338 1289411 - 1289391 - T 76 -12.6 -2.81464 | opp_overlap 1289391 1289388 CCAGTAGGTAGCAGA TCCTCGGG ACAAG CCCGAGGA TGATGTTGAGAGCAG deaD 1291307 - 1289460 - | cold-shock dead-box protein A TERM 1339 1289761 - 1289743 - G 84 -10.2 -4.18197 | ATGGCGGAGGTAAAA CGGTCGAC GGC GTCGGCCG CAAGTTCCACGAAGG TERM 1340 1289929 - 1289943 + g 71 -5.6 -4.39407 | overlap 1289922 1289923 AAATCGGAGCGGTCG CGGCGC GGC GCGTTG TTTTCGGTTGTTTCG Atu8038 1291562 - 1291308 - | hypothetical protein TERM 1341 1291875 - 1291899 + G 79 -7.8 -4.46212 | gap 1 GCAGAATGCTGCGAA GGTGGCCGGCA CCAA TGCCG-CCTCC TTTTATGATGCGCGC lysC 1291699 - 1292976 + | aspartate kinase TERM 1342 1293047 - 1293068 + F 88 -13.7 -3.32343 | opp_overlap 1293047 TGGCGTTTCATGAAA GCGTGTCCC TTGC GGGACGCGC TTCTCGCGCTATAAA TERM 1343 1293068 - 1293047 - f 79 -11.5 -3.72576 | opp_overlap 1293047 TGGCGTTTCATGAAA GCGTGTCCC TTGC GGGACGCGC TTCTCGCGCTATAAA TERM 1344 1294441 - 1294412 - g 72 -2.7 -4.77036 | gap 1, overlap 1294413 GCCTATGAGGAAAAA GTTCGCCTGCGCGC CAA GCGC-CAGGAGCAG TTCCGCGCGCTGCGC TERM 1345 1294760 - 1294741 - g 70 -4.9 -4.44797 | opp_overlap 1294753 1294754 1294757 CCAGGAAGAGGAAAA CCCGGCA CTCGGC TGGCGGG CGATCCGCCTGTCAC ptsI 1293152 - 1295419 + | phosphoenolpyruvate-protein phosphotransferase TERM 1346 1295630 - 1295594 - g 70 -3.6 -4.63218 | CGGTGGTGAAGAAAA TCCGCGACTACGAAAA AGCGA TTTCCGAGGCCGCTGA TCTGGAAGCGCTGCT TERM 1347 1295801 - 1295780 - g 83 -4.4 -5.14563 | overlap 1295796 CGGCGGATGAAAAAA GCGCGA TCCTTGAAAT TCGCGC CGGCACCGGCGGGTC prfA 1295449 - 1296531 + | peptide chain release factor 1 hemK 1296528 - 1297397 + | protoporphyrinogen oxidase TERM 1348 1297546 - 1297556 + F 77 -8.2 -4.17316 | GGTATGGGTCTCAGT CCCG AAG CGGG TTCTTTTAGAACCCT TERM 1349 1297741 - 1297718 - f 70 -3 -4.74801 | opp_overlap 1297730, overlap 1297719 CAATTTCAGGAAAAA TTTCCAGCGG TTTT CCGCCCGGAA TTGCATGAAATAATC Atu4176 1297793 - 1298578 + | hypothetical protein TERM 1350 1298606 - 1298635 + F 100 -12.3 -5.03314 | opp_overlap 1298613, overlap 1298613 AACAAGCTCTGCAAT TGAAAAACTCCGG CTTG CCGGAGTTTTTTG TTTTTTGGCGATGGG TERM 1351 1298613 - 1298628 + F 100 -10.4 -6.04324 | opp_overlap 1298613, overlap 1298606 TCTGCAATTGAAAAA CTCCGG CTTG CCGGAG TTTTTTGTTTTTTGG TERM 1352 1298628 - 1298613 - f 100 -10.4 -4.74103 | opp_overlap 1298613 1298606 TCTGCAATTGAAAAA CTCCGG CTTG CCGGAG TTTTTTGTTTTTTGG TERM 1353 1299343 - 1299330 - g 81 -5.2 -5.00616 | GCTTCCCTGAAAAAA GCGG GTGCGA CCGC ACAGGCGCTCAATCA clpB 1298943 - 1301567 + | ATP-dependent Clp protease, ATP-binding subunit TERM 1354 1301600 - 1301570 - T 100 -12.7 -4.37886 | gap 1, opp_overlap 1301575, overlap 1301575 CGATGCGGCATAAAA CG-AAAGGGCTCCG GAAA CGGAGCCCTTTTCA TTTGGTCGGAACTGT TERM 1355 1301575 - 1301594 + T 100 -15 -4.58773 | opp_overlap 1301575 1301570 CGGCATAAAACGAAA GGGCTCCG GAAA CGGAGCCC TTTTCATTTGGTCGG TERM 1356 1301594 - 1301575 - T 100 -15 -4.26881 | opp_overlap 1301575, overlap 1301570 CGGCATAAAACGAAA GGGCTCCG GAAA CGGAGCCC TTTTCATTTGGTCGG Atu4178 1303583 - 1301637 - | hypothetical protein Atu4179 1304204 - 1303752 - | hypothetical protein TERM 1357 1304880 - 1304860 - R 71 -9.7 -3.5594 | opp_overlap 1304859 1304856, overlap 1304851 AAGTCAGGGGTGAAA TCCCGCAGC TCA ACTGCGGAA CTGCCTTTGATACTG TERM 1358 1306311 - 1306341 + r 100 -16.2 -3.54653 | opp_overlap 1306284 1306320, overlap 1306314 TTCGATCCCGCTCAG CTCCACCAATCGCG GAA CGCGATTGGTGTGG TTATGTGCTGACGCT TERM 1359 1306314 - 1306338 + r 100 -18.7 -2.9062 | opp_overlap 1306320, overlap 1306311 GATCCCGCTCAGCTC CACCAATCGCG GAA CGCGATTGGTG TGGTTATGTGCTGAC TERM 1360 1306649 - 1306659 + r 84 -3.2 -5.29445 | GTAGGAAGGATCGCT TGTC CGA GGCA TTTTTGTTGTTGGAG Atu4183 1307114 - 1306725 - | hypothetical protein TERM 1361 1307145 - 1307193 + H 93 -13.4 -3.81447 | gap 1, opp_overlap 1307145 GCAACCCACCTTAAA TGCTTGGAAAATCCAGTCTGTTT TAAC GAACGGCCTGGGTTT-CCAAGCA TTATTATAAGGTATC TERM 1362 1308340 - 1308324 - H 77 -8 -4.08546 | overlap 1308328 ATGAGTAACGATAAA GGGAGT GAGAG ACTCCC TCGCCGAAAGACCAA TERM 1363 1308728 - 1308715 - H 74 -4.5 -4.7254 | ACTGTTTATCAAAAA CACAG GGCT CTGCG AAGTAGCAATACGAC Atu4185 1309700 - 1309999 + | hypothetical protein TERM 1364 1310248 - 1310266 + T 86 -11.7 -3.8901 | opp_overlap 1310248 1310247 CCAGCCGACACCAAG GGCCGCT ATCCA AGCGGCC TTTCGTCGTTTAAGG TERM 1365 1310266 - 1310248 - T 72 -11.7 -2.55999 | opp_overlap 1310248, overlap 1310247 CCAGCCGACACCAAG GGCCGCT ATCCA AGCGGCC TTTCGTCGTTTAAGG TERM 1366 1310359 - 1310337 - T 72 -12.2 -2.62184 | opp_overlap 1310343, overlap 1310339 1310343 GCGCCCCTTACAGGA GATAAATTGC TCC GCAATTTATC TCCGGCAAAGATCCG TERM 1367 1310396 - 1310371 - T 70 -9.7 -3.34715 | overlap 1310369 1310390 TATCTCCGGCAAAGA TCCGTCGTCGC TAAA GCAACGACGTA ACCGCGACATTCGGC TERM 1368 1310427 - 1310398 - T 81 -12.9 -3.15252 | gap 1, overlap 1310390 AAAGCAACGACGTAA CCGCGACATTCGGC CTT GCCGAATG-CGCTG GACGCGGGGTGGAGC TERM 1369 1310528 - 1310551 + T 100 -18.2 -4.74103 | opp_overlap 1310528 ACACCCAATATCAAA GGGCTCCGAG GAAA CTCGGAGCCC TTTTTGCGTTCAGAA TERM 1370 1310551 - 1310528 - T 100 -18.2 -3.94184 | opp_overlap 1310528 ACACCCAATATCAAA GGGCTCCGAG GAAA CTCGGAGCCC TTTTTGCGTTCAGAA TERM 1371 1310690 - 1310656 - T 74 -2.6 -5.00616 | opp_overlap 1310662, overlap 1310658 TGTTGCTTCAAAAAA TGGTAACGCATGGCGC GAG GGGCCGTGCGTGTTCA ATCCCGGTGATGATC TERM 1372 1310662 - 1310684 + T 72 -11.2 -3.08996 | opp_overlap 1310658 1310656 TTCAAAAAATGGTAA CGCATGGCGC GAG GGGCCGTGCG TGTTCAATCCCGGTG TERM 1373 1310792 - 1310766 - T 70 -3 -4.82154 | overlap 1310771 AACTCACATGAAAAA TAACAGCATCGT CGT ATGATGCTCTCA ACGTCCGAAAGCGTT dapA 1311727 - 1310831 - | dihydropicolinate synthase TERM 1374 1311135 - 1311147 + g 73 -9.1 -3.85698 | CCGACTGCGGCGAAG GCTGG GGC CCAGC TTTCTGCAAGGCCGC Atu4190 1312640 - 1311759 - | calcium-binding protein, regucalcin Atu4191 1313415 - 1312684 - | GntR family transcriptional regulator Atu4192 1313719 - 1315668 + | ABC transporter, substrate binding protein (oligopeptide) TERM 1375 1315680 - 1315703 + F 100 -14.6 -4.28774 | opp_overlap 1315673 CTAAACGACTGATGC GTGTCGCCGT TTGC GCGGCGACAC TTTTCGATTGGGTCG TERM 1376 1316695 - 1316724 + G 76 -12.9 -3.41051 | TCCTGATCTGCGCGT TGACGCTGATCGG ATCG CTGATCAGCGACA TTCTGCTGGCGCTGG Atu4193 1315779 - 1316765 + | ABC transporter, membrane spanning protein (oligopeptide) Atu4194 1316775 - 1317899 + | ABC transporter, membrane spanning protein (oligopeptide) TERM 1377 1318434 - 1318462 + G 72 -13.1 -3.05384 | ATATTCCGGCGGTAT GCGCCAGCGCG CCATGAT CGCGATGGCGC TTGCCTGCAAACCAC Atu4195 1317928 - 1319634 + | ABC transporter, nucleotide binding/ATPase protein (oligopeptide) TERM 1378 1319629 - 1319616 - f 75 -3.7 -4.90266 | overlap 1319617 GGCACCAATCAAAAA TGGCG CTGC CGCCC AATGACCCCACATTT Atu4196 1319679 - 1320866 + | hypothetical protein TERM 1379 1320884 - 1320903 + G 76 -10.6 -3.71873 | opp_overlap 1320884 CGATCTTCATCGAAA GCGGACCG CTCT CGGCCCGC TTTCGCTCTGACTGG TERM 1380 1320903 - 1320884 - g 82 -12.8 -3.65351 | opp_overlap 1320884 CGATCTTCATCGAAA GCGGACCG CTCT CGGCCCGC TTTCGCTCTGACTGG Atu4197 1320844 - 1321719 + | hypothetical protein Atu4198 1322202 - 1321906 - | hypothetical protein Atu4199 1322845 - 1322273 - | TetR family transcriptional regulator Atu4200 1323429 - 1322941 - | hypothetical protein Atu4201 1323428 - 1324009 + | flavodoxin, WrbA-like protein TERM 1381 1324036 - 1324061 + Tr 100 -15.5 -3.20901 | opp_overlap 1324035 1324034 GTAAATCCAATAAGT GCCTTCCGCGT TATG ATGCGGAAGGC TTGGGTTCATAGCCT TERM 1382 1324262 - 1324250 - TR 70 -6.9 -4.17657 | opp_overlap 1324249 1324253 CACGATACTCTAAAA GCGGA CGG CCCGC GTCATTATCTGGGTC Atu4202 1325150 - 1324449 - | methyltransferase TERM 1383 1324572 - 1324583 + g 71 -7.2 -4.24002 | GCGATCATGGGACAT GCGC TCGT GCGC TTTTGCGATTTCCAC Atu4203 1325878 - 1325168 - | hypothetical protein Atu4204 1326709 - 1325969 - | AraC family transcriptional regulator TERM 1384 1326800 - 1326788 - R 71 -10.5 -3.21099 | GTTGTTGAGCAGTAA GCGCG TGT CGCGC TCGGCCAACGGGCGC tetR 1328236 - 1327589 - | TetR family transcriptional regulator TERM 1385 1328780 - 1328804 + G 71 -5.6 -4.30719 | CATTGGTGGCGTCAT TGGCGCCTGG TGGCT TCGGGCACCA TTTCTTGTGGCAGCC tetA 1328325 - 1329509 + | tetracycline resistance protein Atu4207 1330797 - 1329649 - | ROK family transcriptional regulator TERM 1386 1331802 - 1331783 - g 71 -6.4 -4.17048 | gap 1 GGTCGGTGAAAAGAA CGGTGCGAC CTG GCCG-ACCG ACAAGGATGGTTATT TERM 1387 1331870 - 1331858 - g 71 -6.2 -4.36914 | overlap 1331860 GCCGGCGGCAGAAAA GGGC GGCAA GCCC GCAAACCTGTCGCAT TERM 1388 1331937 - 1331921 - g 84 -5.7 -4.87626 | overlap 1331923 TGCCAAGAGCAAAAA CGCCGAC ATC GCCGCCG ATCTCGTGGCGCTCG Atu4208 1330887 - 1332260 + | ABC transporter, substrate binding protein (sugar) TERM 1389 1332352 - 1332372 + G 100 -12.5 -4.55287 | opp_overlap 1332347, overlap 1332355 TTCCAGATCAGGCCT CACCGGCCG GCC CGGCCGCTG TTTTATCTCGCTCCG TERM 1390 1332355 - 1332369 + G 70 -12.8 -2.92496 | opp_overlap 1332347, overlap 1332352 CAGATCAGGCCTCAC CGGCCG GCC CGGCCG CTGTTTTATCTCGCT Atu4209 1332328 - 1333239 + | ABC transporter, membrane spanning protein (sugar) TERM 1391 1334006 - 1333975 - g 76 -10 -3.70902 | opp_overlap 1334001, overlap 1333976 1333978 CCTGGGACATCGAAA TGAGCGCGGTGACC GATG GGGCAACGCGCTCG CAGGCGTTTCGTATG TERM 1392 1334005 - 1333976 - g 73 -13.5 -2.82327 | opp_overlap 1334001, overlap 1333975 1333978 CTGGGACATCGAAAT GAGCGCGGTGACC GATG GGGCAACGCGCTC GCAGGCGTTTCGTAT Atu4210 1333239 - 1334297 + | ABC transporter, membrane spanning protein (sugars) TERM 1393 1334353 - 1334338 - g 81 -6.1 -4.74801 | opp_overlap 1334337 1334338 TAATGTCACCAAAAA CTGGG GCGAGA CCCAG GTTCTGAAGCCGATG Atu4211 1334303 - 1335415 + | ABC transporter, nucleotide binding/ATPase protein (sugar) ugpQ 1335428 - 1336174 + | glycerophosphodiester phosphodiesterase Atu4213 1336665 - 1336285 - | hypothetical protein TERM 1394 1336500 - 1336527 + g 76 -12.7 -3.41693 | opp_overlap 1336485 1336500 TTGCGCTGGCGAAGA GCGCCACCTCG CCTAGA CAAGGTGGCGC TTCATTCGTGCTGAA TERM 1395 1336527 - 1336500 - G 83 -15.6 -3.01712 | opp_overlap 1336500, overlap 1336485 TTGCGCTGGCGAAGA GCGCCACCTCGC CTAG ACAAGGTGGCGC TTCATTCGTGCTGAA TERM 1396 1336638 - 1336625 - G 77 -3.1 -5.00616 | gap 1 CCGCGCTTCAAAAAA GCG-GT CGA ACGCGC ATCCTCGCTGTTGGG cspA 1337029 - 1336799 - | cold shock protein TERM 1397 1337058 - 1337040 - R 78 -11.8 -3.18274 | opp_overlap 1337031 TGCACCTCAACGCAA TACCGATC ATT GATCGGTA CGGCAAGGATTTCGG ftsZ 1337776 - 1337330 - | cell division protein fabF 1339130 - 1337832 - | 3-oxoacyl-(acyl carrier protein) synthase II TERM 1398 1338014 - 1338030 + g 70 -3.7 -4.58395 | CGTTCAGGTTCAGTG TCGGA GGGGCGA TCCGA TTTTTGAGCGCTAGA Atu4217 1339864 - 1339277 - | TetR family transcriptional regulator TERM 1399 1340702 - 1340691 - g 89 -7.2 -5.12971 | overlap 1340692 1340693 AACAGGCAAGAAAAA GCGG CGCT CCGC CAGATATCCAATGCT Atu4218 1339962 - 1341071 + | multidrug efflux protein Atu4219 1341071 - 1344181 + | cation efflux system protein Atu4220 1344211 - 1345086 + | short-chain dehydrogenase Atu4221 1345658 - 1345110 - | hypothetical protein soxA 1348614 - 1345651 - | sarcosine oxidase alpha subunit TERM 1400 1345983 - 1345999 + g 74 -12.3 -3.21099 | GCTCCAGCATCCGCC GGCCGAT GAA ATCGGCC TTGGTGGTGGAAACC TERM 1401 1346920 - 1346897 - G 78 -4.4 -4.83169 | overlap 1346898 1346899 ACGGGCGTATAAAAA GGCCGGAAGG TGGT CGTGCCGACC TCCGCCGGGGAAACC TERM 1402 1348258 - 1348246 - G 71 -6.9 -4.25104 | overlap 1348231 GGTCTTGTAGTAAAA CCCCG CGC CGAGG AAGGGCGACAGCAGG TERM 1403 1348308 - 1348322 + g 71 -7.1 -4.27316 | overlap 1348306 CGAAATCGAGGGAGG GCCAG CGGTT CTGGC TTTTCGCTTCCAGCC soxD 1348886 - 1348611 - | sarcosine oxidase delta subunit TERM 1404 1348924 - 1348940 + r 86 -7.9 -4.7497 | GATTAATGAAGGTTG GGCTGGG CGC CCTGGCC TTTTTCATCGATGAG soxB 1350161 - 1348911 - | sarcosine oxidase beta subunit TERM 1405 1349945 - 1349967 + g 75 -2.6 -4.96848 | overlap 1349948 TCGTGGTATTGCGGC CGACATTGCC GGA GCCGATGTAG TTTTTCTCTAGCACG TERM 1406 1350089 - 1350101 + g 73 -10.5 -3.56366 | overlap 1350097 GTTTCGGCGACACCT CCCGC CAT GCGGG TTTCCACGCCTTGTT TERM 1407 1351089 - 1351135 + G 73 -5.2 -4.62069 | CACGCCCGGCGATTG CTGG-AGCAAAGCCCGCTCTCC ATCGC GGA-AGTGGCCTTTGCCACCGG TTTTTCCAGTGCAGG glxA 1350252 - 1351226 + | AraC family transcriptional regulator Atu4226 1351314 - 1351940 + | transcriptional regulator TERM 1408 1352084 - 1352100 + G 79 -12.3 -3.56092 | CAAAAGCCTTGAACC GCAGCTG GGT CAGCTGC TTTCGGACATGCTCG purF 1352037 - 1352942 + | amidophosphoribosyltransferase TERM 1409 1353543 - 1353523 - g 70 -3.3 -4.66609 | overlap 1353540 GACTGCATCGAAAAA GAGATGC GGCCCGA ACATCTC GAAAAGCTCGCAGAA fwdC 1352980 - 1353666 + | formyl-methanofuran dehydrogenase gltB 1353683 - 1355011 + | glutamate synthase large subunit TERM 1410 1355025 - 1355054 + F 100 -12.9 -5.00884 | opp_overlap 1355024 1355023 1355027 AAGCCACAAAGAACG GACGGGCGCATTT GGGA GGATGTGCCCGTC TTTTTTCAAAGAAGT glnA 1355097 - 1356404 + | glutamine synthetase III TERM 1411 1356419 - 1356432 + F 83 -9.5 -4.07687 | AGCCCGGTTTTCCCC GCCGC CCTT GCGGC TTTTCCCGCGCGCGT TERM 1412 1356437 - 1356460 + F 100 -14.6 -4.64766 | gap 1 GCCCTTGCGGCTTTT CCCGCGCGCGT CAA AC-CGCGCGGG TTTTTCCCATATCGA purU 1356493 - 1357377 + | formyltetrahydrofolate deformylase Atu4232 1357532 - 1358227 + | GntR family transcriptional regulator TERM 1413 1358230 - 1358217 - f 84 -5.9 -5.02074 | opp_overlap 1358196 TGACGGCGCAAAAAA CCGCC GACT GACGG ATTTTTCGGCTGAAA TERM 1414 1358252 - 1358288 + F 74 -7.2 -4.18294 | overlap 1358255 1358256 CGGCTGAAATCGATC CATTCTTGTGGCTCCC CTGCC GGGAGCCGCATAGGTG TTCTTATTTACTTTA TERM 1415 1358255 - 1358286 + F 74 -9.5 -3.65974 | gap 1, overlap 1358252 1358256 CTGAAATCGATCCAT TCT-TGTGGCTCCC CTGCC GGGAGCCGCATAGG TGTTCTTATTTACTT Atu4233 1358411 - 1359271 + | ABC transporter, substrate binding protein (amino acid) Atu4234 1359445 - 1360038 + | ABC transporter, membrane spanning protein (amino acid) Atu4235 1360068 - 1360799 + | ABC transporter, nucleotide binding/ATPase protein (amino acid) TERM 1416 1361372 - 1361358 - g 83 -4.2 -5.08824 | opp_overlap 1361367 1361368 CTGCCAGCGAAAAAA TGCTGA TCC TCGGCA CCGCCGCTTTGCCGG Atu4236 1360880 - 1362058 + | dehydrogenase TERM 1417 1362301 - 1362289 - g 70 -4.8 -4.56597 | TGCGGTGGTGAAAAA TCCC TGGGC GGGA AAAGGCTTCGTGGAA Atu4237 1362176 - 1362778 + | hypothetical protein TERM 1418 1362922 - 1362966 + G 71 -7.8 -4.07568 | CTGATCCTCATCCAC GGCGTCGGCATGCGGCTT GAAGCCTGG GAGCCGCAGATCGACGTC TTTTCCCGCACGCAC TERM 1419 1363059 - 1363073 + G 82 -9.2 -4.38154 | GCTTACGGATTTTGT CGGCTG GTT CGGCCG TTTTCTGGACGATAT Atu4238 1362790 - 1363635 + | hydrolase TERM 1420 1364274 - 1364305 + G 76 -6.4 -4.57755 | overlap 1364276 CTGACATCGCGCCTT CAGGACCTGACGGG CCTC TCCGTCAGGACAGG TTTTCTATACTCCGT TERM 1421 1364346 - 1364333 - g 79 -9.5 -4.25256 | CGTTTACGAAAACAA GGCGG ATGG CCGCC AGCATATCGTCTACC Atu4239 1363632 - 1364570 + | flavoprotein oxidoreductase TERM 1422 1364697 - 1364658 - g 70 -10.6 -3.53444 | TCACCCTTTGCGAAA TCGCCGATCGCGGCGGCA TGCA TGCCATCTGGACCGGCGA ACATCACGGCATGGA TERM 1423 1365253 - 1365230 - g 70 -3.8 -4.64144 | gap 1 AAGAACCCGGAAAAA CAGC-GCCCGA AAA TCATGCTGCTG CGCCATACCTATGTC TERM 1424 1365445 - 1365467 + G 79 -15.6 -2.71364 | opp_overlap 1365445 CATGCGCAAGAACAA CGTCGTCGGC GAT GCCGATGACG TCATTGCCCGCCTCA TERM 1425 1365467 - 1365445 - g 91 -13.4 -3.95324 | opp_overlap 1365445 CATGCGCAAGAACAA CGTCGTCGGC GAT GCCGATGACG TCATTGCCCGCCTCA Atu4240 1364567 - 1365607 + | alkanal monooxygenase alpha chain TERM 1426 1366409 - 1366434 + G 74 -5.4 -4.56597 | gap 1, opp_overlap 1366409 TGCCGATCTCGAAAG TGCC-GCCAAC GCCCA GGTGGCAGGCA TTTTTGCAGCGACCG TERM 1427 1366535 - 1366555 + G 85 -12.5 -3.70902 | opp_overlap 1366530 1366529 GGCGGCAAAGGCCGA GGCGATCCG CAT CGGTTCGCC TTTGGATATGGCGAC TERM 1428 1366736 - 1366751 + G 70 -4 -4.59511 | overlap 1366737 CGGCATTCGCTCGCC TTCCTT GGAA AAGGAG TTTTTCGGCCCTGTT dhaS 1365612 - 1367078 + | aldehyde dehydrogenase Atu4242 1367083 - 1367397 + | hypothetical protein Atu4243 1367454 - 1368464 + | ABC transporter, substrate binding protein (polyamine) TERM 1429 1368504 - 1368465 - f 100 -15 -4.21812 | gap 1, opp_overlap 1368470 1368471 TGGCAGGCAAAATAA GATAACGGCGCGGGCTGCC ACG GGC-GCCCGCGCAATTTTC ACGTCCGGGAGGTTT TERM 1430 1368470 - 1368499 + F 88 -11.3 -4.13767 | gap 1, opp_overlap 1368465, overlap 1368471 GGCAAAATAAGATAA CGGCGCGGGCTGCC ACG GGC-GCCCGCGCAA TTTTCACGTCCGGGA TERM 1431 1368471 - 1368498 + F 91 -14.8 -3.08046 | gap 1, opp_overlap 1368465, overlap 1368470 GCAAAATAAGATAAC GGCGCGGGCTGCC ACG GGC-GCCCGCGCA ATTTTCACGTCCGGG Atu4244 1368524 - 1369399 + | ABC transporter, membrane spanning protein (polyamine) TERM 1432 1369477 - 1369491 + G 72 -2.1 -4.84017 | overlap 1369478 TGACGTCGGCATTTC TGATC CTCCC GATCG TTTTTATCGCCGCTT TERM 1433 1369701 - 1369722 + G 74 -12.3 -3.13403 | gap 1, overlap 1369700 CGCGGACGTTTCCTC GGGCGCGGCA CGC TGC-GCGCCC TGTTCATGACGCCGA TERM 1434 1369766 - 1369778 + G 81 -6.2 -4.72986 | CGTGGTCCTTGCGGT GGCG CTTTA CGCC TTTTTCCTGAAACTC Atu4245 1369401 - 1370201 + | ABC transporter, membrane spanning protein (polyamine) TERM 1435 1370607 - 1370663 + G 74 -13.1 -3.14218 | gap 3, opp_overlap 1370593, overlap 1370623 AGCCCGCGCAGATGT CCGGCGG-TCAGCAGC-AGCGCGTGGCG CTGG CGC-GTGCGCTTGCTTATGATCCGCCGG TACTTTTGATGGATG Atu4246 1370198 - 1371280 + | ABC transporter, nucleotide binding/ATPase protein (polyamine) attK 1371293 - 1372747 + | aldehyde dehydrogenase Atu4248 1373036 - 1372755 - | hypothetical protein Atu4249 1374329 - 1373286 - | ABC transporter, nucleotide binding/ATPase protein (sugars) TERM 1436 1373697 - 1373669 - G 82 -10.9 -3.85817 | ACGGTCGGTCATAAA GCTCGAGCGGCGC CCC GCACTGCTCGACC CGCCCGGCATTCATC Atu4250 1375186 - 1374344 - | ABC transporter, membrane spanning protein (sugar) Atu4251 1376102 - 1375176 - | ABC transporter, membrane spanning protein (sugar) Atu4252 1377417 - 1376158 - | ABC transporter, substrate binding protein (sugar) TERM 1437 1376473 - 1376485 + g 70 -3.3 -4.59773 | CGCCAGGAATTCCGC CGCGA GCT TCGGG TTTTTGCCGCTGGCC Atu4253 1379057 - 1377447 - | hypothetical protein Atu4254 1380117 - 1379059 - | LacI family transcription regulator TERM 1438 1379401 - 1379373 - G 100 -6.5 -5.75342 | opp_overlap 1379387 CTTCGGCAAAAAAAA CGACGCTTGCTCC GCT GGCGCGAACGGCG GCCAGTTGCTCGGCC atsA 1380352 - 1380876 + | hypothetical protein Atu4256 1382571 - 1381036 - | ABC transporter, nucleotide binding/ATPase protein (oligopeptide) TERM 1439 1381574 - 1381556 - G 73 -10.2 -3.63707 | opp_overlap 1381551 1381568, overlap 1381548 AACACAAGCTGCAAA TGCCGCCG CAA CGGCCGCA TGGCCTTTCGGTCAA Atu4257 1383661 - 1382645 - | ABC transporter, membrane spanning protein (oligopeptide) Atu4258 1384691 - 1383768 - | ABC transporter, membrane spanning protein (oligopeptide) TERM 1440 1383871 - 1383842 - G 93 -11.5 -4.33708 | AAACGATGACGAAAA TGGCGACGAGAAC CACG GTTCCCATCACCA GCGTATAGTCGCGAT TERM 1441 1384705 - 1384745 + r 74 -10.4 -3.61517 | gap 1, overlap 1384706 1384708 ATGATTTTTCGGGCT CCGGC-ATGGCACGGTGGT GTTG GCCACCGTGCCAGCGCTGC TTATTCGGAAACGCT TERM 1442 1384706 - 1384744 + r 79 -13.9 -2.76696 | gap 1, overlap 1384705 1384708 TGATTTTTCGGGCTC CGGC-ATGGCACGGTGGT GTTG GCCACCGTGCCAGCGCTG CTTATTCGGAAACGC TERM 1443 1384708 - 1384742 + r 79 -12.9 -2.93073 | gap 1, overlap 1384706 1384705 ATTTTTCGGGCTCCG GC-ATGGCACGGTGGT GTTG GCCACCGTGCCAGCGC TGCTTATTCGGAAAC Atu4259 1386341 - 1384746 - | ABC transporter, substrate binding protein (oligopeptide) TERM 1444 1386438 - 1386414 - R 70 -5.1 -4.3953 | opp_overlap 1386423 TGCAACCACAATAAA TTGTGAGTT GATGCGG AACCCACAA CTTCAGTAGCCCCTA TERM 1445 1386602 - 1386577 - R 100 -17.5 -5.14563 | opp_overlap 1386574 1386573 1386577 GCGCCGACGAAAAAA GCGGGCCGGCC GACT GGCCGCCCCGC TCGATTTGAAACCAG TERM 1446 1386577 - 1386602 + r 90 -17.5 -2.64155 | opp_overlap 1386577, overlap 1386574 1386573 GCGCCGACGAAAAAA GCGGGCCGGCC GACT GGCCGCCCCGC TCGATTTGAAACCAG Atu4260 1387403 - 1386627 - | ABC transporter, membrane spanning protein Atu4261 1388211 - 1387390 - | ABC transporter, nucleotide binding/ATPase protein TERM 1447 1388043 - 1388101 + g 89 -12.5 -4.07568 | GGATGGTGGATTTTC CG-CAACCGGTGGGGCCGACGATGGAGAG AAA CTCTCCATCGCCAACCCTAA-GGTTGACG TTTTGAACGGCAACG Atu4262 1389150 - 1388221 - | ABC transporter, substrate binding protein TERM 1448 1389002 - 1388987 - G 78 -10.4 -3.89346 | GTGTGATCGTAGAAA CCGACG GCGA CGTCGG TGGAACCGGCAACGA Atu4263 1390365 - 1389268 - | hypothetical protein TERM 1449 1389813 - 1389830 + g 70 -3.3 -4.59773 | overlap 1389814 CTACGGCTTTGCCTG TCGGCAG CAAC CTTCCGG TTTTTGCACCTGCGG Atu4264 1390459 - 1391355 + | LysR family transcriptional regulator Atu4265 1392061 - 1391447 - | hypothetical protein Atu4266 1393442 - 1392096 - | GntR family transcriptional regulator Atu4267 1393578 - 1393982 + | hypothetical protein Atu4268 1394014 - 1394643 + | RhtB family transporter TERM 1450 1395033 - 1395066 + G 79 -12.3 -3.42354 | opp_overlap 1395003, overlap 1395021 1395031 GTCCCGGTCCGGCGC GCGCAGGGGCGGC TTTCCTTT GCCGCCCCGCCGC TTATCCGTTCCGGTG phzC 1394700 - 1395545 + | phenazine biosynthesis protein TERM 1451 1395525 - 1395540 + F 74 -10.4 -3.53224 | opp_overlap 1395518 CGCACACATGTCGAA GGCCGA TTGC TCGGCC TTTGAAAGACAGATG Atu4270 1395572 - 1396168 + | hypothetical protein TERM 1452 1396276 - 1396236 - T 83 -9.7 -4.11585 | gap 1, overlap 1396256 1396275 ATCGACCAGAAAGAA CGTTA-TCCGGCCCGGCG AAACAG CGCCGGACCGATCCAACG CCGGCGATCATCTGG Atu4271 1397171 - 1396284 - | LysR family transcriptional regulator Atu8039 1397284 - 1397649 + | hypothetical protein TERM 1453 1398044 - 1398016 - g 100 -3.7 -5.81412 | overlap 1398017 1398020 GTTACGGAAAAAAAA GTGACGGTCCGGA TTT TCCGAACCGTTGG GCAGTCGGCGACTAT TERM 1454 1398040 - 1398020 - g 76 -13.3 -3.05327 | overlap 1398017 1398016 CGGAAAAAAAAGTGA CGGTCCGGA TTT TCCGAACCG TTGGGCAGTCGGCGA accB 1397935 - 1398378 + | acetyl-CoA carboxylase biotin carboxyl carrier protein TERM 1455 1398714 - 1398680 - g 70 -4.2 -4.46212 | opp_overlap 1398696, overlap 1398682 GTTTCTATCAGAAAA TACCGCCTTTTCGGAC GCC GTCGAAAAAGCCGGCC TTGTTTTCATCGGAC TERM 1456 1398712 - 1398682 - g 71 -9 -3.84183 | opp_overlap 1398696, overlap 1398680 TTCTATCAGAAAATA CCGCCTTTTCGGAC GCC GTCGAAAAAGCCGG CCTTGTTTTCATCGG TERM 1457 1399423 - 1399404 - g 71 -7.2 -4.21908 | gap 1, overlap 1399405 CAGCAGGATGTAAAA TGCGAAGGC CAC GCCTTCG-A GTGCCGCATCAACGC accC 1398375 - 1399769 + | acetyl-CoA carboxylase, biotin carboxylase Atu4274 1399766 - 1400194 + | hypothetical protein TERM 1458 1400453 - 1400423 - g 73 -9.6 -3.91084 | CTATCTTCAAGGAAA CACCCGATGACCCC GAC AGTGTCGTCGGGCG GCTGCGGGACGCATG Atu4275 1400191 - 1400898 + | hypothetical protein Atu4276 1400895 - 1401890 + | hypothetical protein Atu4277 1401921 - 1402688 + | hypothetical protein TERM 1459 1402845 - 1402858 + G 71 -8.1 -4.07568 | GTCGTGAGCCTTTCC TCCGG TGAG CCGGA TTTTCCAACCCCCGC aatA 1402734 - 1403939 + | aspartate aminotransferase TERM 1460 1403944 - 1403993 + T 76 -12.3 -3.08966 | gap 1, opp_overlap 1403949 1403951 1403953, overlap 1403946 ACATACGCTGACTGA TG-CAACACATTTCCCGGTCCG CTGTGGC CAGACCGGGAGATGTGATGTCA TTCCCTAAAGTTTCA TERM 1461 1403946 - 1403990 + T 83 -15.1 -2.7556 | opp_overlap 1403949 1403951 1403953, overlap 1403944 ATACGCTGACTGATG CAACACATTTCCCGGTCCG CTGTGGC CAGACCGGGAGATGTGATG TCATTCCCTAAAGTT TERM 1462 1403987 - 1403949 - T 91 -15.4 -3.07816 | opp_overlap 1403946 1403944, overlap 1403951 1403953 CGCTGACTGATGCAA CACATTTCCCGGTCCG CTGTGGC CAGACCGGGAGATGTG ATGTCATTCCCTAAA TERM 1463 1403985 - 1403951 - T 76 -12.2 -3.09878 | opp_overlap 1403946 1403944, overlap 1403949 1403953 CTGACTGATGCAACA CATTTCCCGGTCCG CTGTGGC CAGACCGGGAGATG TGATGTCATTCCCTA nac 1404903 - 1403998 - | LysR family transcriptional regulator TERM 1464 1405772 - 1405784 + G 75 -7.7 -4.19238 | overlap 1405769 AGGCGGAAGACATTG CCGAT GCG ATCGG TTTTGCCATTGCCGC Atu4280 1405144 - 1405923 + | short-chain dehydrogenase TERM 1465 1405917 - 1405928 + F 71 -7.2 -4.00934 | opp_overlap 1405908 1405905 1405917 AAAGAAGGAGCAGAA GCCG TGAG CGGC TTTGATCTTTCGGCT Atu4281 1405920 - 1406627 + | ABC transporter, membrane spanning protein (amino acid) Atu4282 1406624 - 1407382 + | ABC transporter, membrane spanning protein (amino acid) Atu4283 1407379 - 1408143 + | ABC transporter, nucleotide binding/ATPase protein Atu4284 1408174 - 1409010 + | ABC transporter, substrate binding protein (amino acid) TERM 1466 1409086 - 1409056 - f 95 -14.6 -3.76125 | overlap 1409057 CCACTTGAACTCAAA TGCGAGCGGCGGGA CGT TCCCGCCGCCAGCC TTACCGTGGGAGGTT TERM 1467 1409085 - 1409057 - f 95 -18.1 -2.85354 | overlap 1409056 CACTTGAACTCAAAT GCGAGCGGCGGGA CGT TCCCGCCGCCAGC CTTACCGTGGGAGGT menG 1409104 - 1409778 + | S-adenosylmethionine:2-demethylmenaquinone methyltransferase TERM 1468 1409834 - 1409808 - T 84 -13.8 -3.14211 | opp_overlap 1409810 ACCGCCGTTCAGTAA TTCCTTTGGCGA AAA TCGCCAAAGGTA AATTGCGGAATGCAG TERM 1469 1409810 - 1409832 + T 89 -16.4 -2.52896 | opp_overlap 1409808 CGCCGTTCAGTAATT CCTTTGGCGA AAA TCGCCAAAGG TAAATTGCGGAATGC Atu4286 1410762 - 1409923 - | hypothetical protein TERM 1470 1410776 - 1410816 + r 91 -7.4 -4.92757 | opp_overlap 1410778, overlap 1410781 ATGTTTTTCTCCAGA CATGGGCACTCCCTGCCC CGCAT GGACGGGGAGCGCTGGTG TTTTGTTGTTGGTGG Atu4287 1411538 - 1410846 - | NonF-related protein TERM 1471 1410987 - 1411034 + g 82 -14.8 -3.23395 | opp_overlap 1411006, overlap 1411025 GCCGCGCATGGTGAG CGTGCTGGCGAGCAGGAAAGGA ACGA TCCTGTCCAGCTTGACGGCGCG TTCCTCGTCATCGGT TERM 1472 1411797 - 1411832 + G 72 -11 -3.28712 | opp_overlap 1411788 1411787 AAAAAGGCTCGATGA CCGAAGCAGCCGTTGC GCTT GCGACGACGGCATCGG TTCTCAGCAGGGCGA TERM 1473 1412534 - 1412547 + G 70 -3.7 -4.70266 | overlap 1412530 CTGGACCATGCGCAG GGACG CTTC CGGCC TTTTTCGCTGATCTT Atu4288 1411727 - 1412626 + | LysR family transcriptional regulator adhC 1413590 - 1412652 - | alcohol dehydrogenase Atu4290 1413630 - 1413830 + | hypothetical protein Atu4291 1414763 - 1413855 - | LysR family transcriptional regulator TERM 1474 1414224 - 1414238 + g 89 -10 -4.52589 | ATCGGCCGGTGTCTG CGGCAT GCC ATGCCG TTTTATGTAGGAGGG TERM 1475 1415304 - 1415288 - g 76 -9.4 -4.07568 | TCTCGTGCCGGAAAA TCGCCG CGCCT CGGCGA TCGCCATGATGTTCA Atu4292 1414920 - 1416101 + | chloramphenicol resistance protein TERM 1476 1416981 - 1416999 + G 74 -11.6 -3.53224 | CGACGATCCGGACGA GCGGCCGG CAC CCCGCCGC TTTGGCGCGCGGCTC Atu4293 1416166 - 1417191 + | monooxygenase yafB 1417206 - 1418039 + | oxidoreductase TERM 1477 1418049 - 1418071 + T 86 -15.6 -2.75826 | overlap 1418045 1418045 GCCTGATATCCGGAG GGGAGGGGCA TAC TGCTCCTCCC TCATCTGTTCAAATG aroE 1418995 - 1418147 - | shikimate 5-dehydrogenase Atu4296 1420568 - 1418985 - | dehydrogenase TERM 1478 1419582 - 1419570 - G 81 -4.8 -5.00616 | opp_overlap 1419570 1419579 CGTGCCGTCAAAAAA GTCG TTGAG CGAC ATTGTTTTCGGGAAA TERM 1479 1420640 - 1420650 + H 77 -4.6 -4.86822 | TGCATCGACCATTCC CGCT TGC GGCG TTTTCTTGTATGATT Atu4297 1420708 - 1421601 + | AraC family transcriptional regulator Atu4298 1423609 - 1421591 - | hypothetical protein TERM 1480 1421707 - 1421717 + g 72 -2.4 -4.82901 | TGCTCGGCTGAGCGA AGGC GAT GCCA TTTTTCTGGAAGGCC Atu4299 1423945 - 1424484 + | hypothetical protein nwsB 1424686 - 1425321 + | two component response regulator Atu4301 1425633 - 1426391 + | hypothetical protein TERM 1481 1426405 - 1426389 - f 85 -4.4 -5.24129 | overlap 1426394 GCCGCCCAGAAAAAA TAAGCG GTTTG CGCTCA CGAAACCCTATCGGC Atu4302 1426469 - 1426882 + | hypothetical protein Atu4303 1427019 - 1427450 + | hypothetical protein TERM 1482 1427681 - 1427697 + G 83 -3 -5.29716 | gap 1, opp_overlap 1427652 GAAAGATTTGTGGAC CGGCGAT GAGC AT-GCCG TTTTTATTGTCTTCG TERM 1483 1428696 - 1428706 + G 91 -5.4 -5.40072 | opp_overlap 1428680 GAAAAAAGACGCCTT TCTC CTG GAGA TTTTTTTGGCGAAAC Atu4304 1427475 - 1428965 + | hypothetical protein TERM 1484 1430360 - 1430333 - g 78 -13.4 -3.14146 | opp_overlap 1430359, overlap 1430325 1430323 TATAAGAGGACGGAA GCCGCCCTTCGC GAAC GCGAACGGCAGC TGCAGCAGCTTATCG TERM 1485 1431323 - 1431300 - g 74 -5.3 -4.53705 | gap 1 AACGCGCACAGAAAA CGCTC-GAAC GCATT GTCCAGAGCG CCAATTCCGCAGCCG TERM 1486 1431799 - 1431784 - g 71 -6.8 -4.17316 | overlap 1431781 ATGGGCGGAAAAGAA CGAACC GATC GGCTCG AAATTCGTTTTTACC Atu4305 1429208 - 1431850 + | two component sensor kinase Atu4306 1431872 - 1432231 + | two component response regulator TERM 1487 1433089 - 1433053 - g 72 -10.9 -3.34013 | gap 1 GACGGCGTGAAGGAA CGGCTGCGAC-CGGAT CTTCGC ATCCACGTCGCCGCCG CGGAAGTCAAATTCT Atu4307 1432576 - 1433544 + | hypothetical protein TERM 1488 1433576 - 1433611 + F 89 -9 -4.62069 | opp_overlap 1433576 1433581 AGGTCTACCAAGTGA CCACATGCGATCGG GCAGCCAG CAGATCGCATGCGG TTTTTCGGGTCGCCG TERM 1489 1433661 - 1433688 + F 79 -7.6 -4.4017 | overlap 1433663 GGAGCCGGCAGGATC CTGTCGCCTGTG CCCG CGCAGGCCACTG TTTTCTGCAACTTGA TERM 1490 1433663 - 1433686 + F 73 -8.8 -3.80535 | overlap 1433661 AGCCGGCAGGATCCT GTCGCCTGTG CCCG CGCAGGCCAC TGTTTTCTGCAACTT Atu4308 1433832 - 1434647 + | hypothetical protein Atu4309 1435924 - 1434893 - | AraC family transcriptional regulator soxB 1436024 - 1437277 + | sarcosine oxidase beta subunit soxD 1437344 - 1437664 + | sarcosine oxidase delta subunit soxA 1437661 - 1440651 + | sarcosine oxidase alpha subunit TERM 1491 1440737 - 1440750 + G 84 -9.5 -4.52589 | opp_overlap 1440715 GGGTCAGCATGCTGG CCGCG CAGG CGCGG TTTTCTCTGCGGGCG TERM 1492 1441208 - 1441184 - g 70 -10.7 -3.53811 | opp_overlap 1441177 1441187, overlap 1441185 GCCATTTGCTTGAAA CCGGCTGCAAG GAA CTTGCAGCTGA TATCGCCTGATTCTG TERM 1493 1441187 - 1441205 + G 72 -13.2 -2.64091 | opp_overlap 1441185 1441184, overlap 1441177 ATTTGCTTGAAACCG GCTGCAAG GAA CTTGCAGC TGATATCGCCTGATT soxG 1440658 - 1441218 + | sarcosine oxidase gamma subunit glyA 1441237 - 1442505 + | serine hydroxymethyltransferase purU 1442632 - 1443516 + | formyltetrahydrofolate deformylase TERM 1494 1443500 - 1443545 + T 74 -8.4 -4.03413 | gap 2 CCGGCGAACATGTCT CCG-AGC-GTATGGGCTGATCC CGTA GTCTCAGCCCATACAGTTGCGG TTTGTCTAGCGAGGT TERM 1495 1443571 - 1443587 + T 74 -2.2 -5.06414 | overlap 1443573 GAGGTTTCGCAGCGG AAGACG TCTGT CGTCTC TTTTTATTCGGCGGG Atu4316 1444820 - 1443591 - | ABC transporter, membrane spanning protein Atu4317 1444964 - 1445536 + | TetR family transcriptional regulator TERM 1496 1445684 - 1445700 + F 73 -5.7 -4.43949 | opp_overlap 1445684 1445685, overlap 1445685 CGTCGCGAAGAAAAA CCTGCCG ATC CGGCGGA TTTCTATTTACTTTT TERM 1497 1445699 - 1445684 - f 86 -6.8 -5.06414 | gap 1, opp_overlap 1445684 1445685, overlap 1445685 CGTCGCGAAGAAAAA CCTGCCG ATC CGGC-GG ATTTCTATTTACTTT Atu4318 1445784 - 1446836 + | xylitol dehydrogenase TERM 1498 1446928 - 1446886 - f 86 -10.8 -4.08394 | opp_overlap 1446886 1446887, overlap 1446889 ATATGGTGCGGAAAA GTATGA-GTGTAGCCTGCCG CCATC CGGCAGGCTACACGTCA-AG ATTTTACCAGATATC TERM 1499 1446886 - 1446929 + F 88 -11.1 -4.10657 | gap 1, opp_overlap 1446886 1446889, overlap 1446887 ATATGGTGCGGAAAA GTATGA-GTGTAGCCTGCCG CCATC CGGCAGGCTACACGTCAAGA TTTTACCAGATATCG TERM 1500 1446887 - 1446928 + F 91 -14.6 -3.06073 | gap 1, opp_overlap 1446886 1446889, overlap 1446886 TATGGTGCGGAAAAG TATGA-GTGTAGCCTGCCG CCATC CGGCAGGCTACACGTCAAG ATTTTACCAGATATC TERM 1501 1446926 - 1446889 - f 100 -19.4 -3.08032 | gap 1, opp_overlap 1446887 1446886, overlap 1446886 TGGTGCGGAAAAGTA TGA-GTGTAGCCTGCCG CCATC CGGCAGGCTACACGTCA AGATTTTACCAGATA TERM 1502 1447423 - 1447480 + G 79 -12.8 -3.5394 | gap 2, opp_overlap 1447423 1447452, overlap 1447464 CAATCTCCCCCAGAA CTGGATCA-GCGAGATCGAGCCGG-ACG AAAT CGTGCCGACACGCTCTCTCGTGATCCAG TTTCCGGAGAGCTTT TERM 1503 1447480 - 1447423 - g 86 -15 -3.29461 | gap 2, opp_overlap 1447423 1447464, overlap 1447452 CAATCTCCCCCAGAA CTGGATCA-GCGAGATCGAGCCGG-ACG AAAT CGTGCCGACACGCTCTCTCGTGATCCAG TTTCCGGAGAGCTTT Atu4319 1447208 - 1448092 + | AraC family transcriptional regulator rbsB 1448190 - 1449101 + | ABC transporter, substrate binding protein (ribose) TERM 1504 1449116 - 1449144 + F 100 -18.2 -3.05463 | AGAACTCCTCCCAGG CCCCGTCCCCAT CTAGT ATGGGGGCGGGG TTAAATCCCGACCAT rbsA 1449173 - 1450675 + | ABC transporter, nucleotide binding/ATPase protein (ribose) rbsC 1450665 - 1451642 + | ABC transporter, membrane spanning protein (ribose) rdh 1451682 - 1452413 + | ribitol 2-dehydrogenase TERM 1505 1452533 - 1452559 + G 85 -12.2 -3.83026 | overlap 1452537 GTTGGCGTCGATGTC GGGACCGGCTCG GCG CGGGCCGGTGTC TTTGATGTCGCGGGC TERM 1506 1452537 - 1452555 + G 81 -13.8 -3.32402 | overlap 1452533 GCGTCGATGTCGGGA CCGGCTCG GCG CGGGCCGG TGTCTTTGATGTCGC TERM 1507 1453807 - 1453782 - g 73 -10.3 -3.70149 | GCCAGATCATCGAAA CACAGGCCCGC AACG GCGCGCCGGTG GAAACCATCAGCGTC Atu4324 1452503 - 1454113 + | ribitol kinase cbr 1454163 - 1454888 + | short chain dehydrogenase TERM 1508 1454961 - 1454911 - T 100 -20.1 -2.75081 | gap 2, opp_overlap 1454921, overlap 1454917 1454921 GATTGCTAAAATCCA CTAAAACG-AATGCGCGG-GGTGCA ACA CGCACCGCCGCGCATTTCATTTTAG GATGCAGCGTTGTCA TERM 1509 1454955 - 1454917 - T 100 -13.3 -4.34771 | gap 2, opp_overlap 1454921, overlap 1454911 1454921 TAAAATCCACTAAAA CG-AATGCGCGG-GGTGCA ACA CGCACCGCCGCGCATTTCA TTTTAGGATGCAGCG TERM 1510 1454921 - 1454950 + T 100 -15.8 -4.20806 | gap 1, opp_overlap 1454921 1454917 1454911 ATCCACTAAAACGAA TGCGCGG-GGTGC AACAC GCACCGCCGCGCA TTTCATTTTAGGATG TERM 1511 1454950 - 1454921 - T 100 -16.5 -3.72073 | gap 1, opp_overlap 1454921, overlap 1454917 1454911 ATCCACTAAAACGAA TGCGCGG-GGTGCA ACA CGCACCGCCGCGCA TTTCATTTTAGGATG Atu4326 1456467 - 1454974 - | proline/glycine betaine transporter TERM 1512 1455059 - 1455077 + g 83 -4.5 -5.13473 | overlap 1455060 AGTTTAGCGAGTTCT TCGTCGA TCTCT TCGACGC TTTTTTCGATATGCT TERM 1513 1455160 - 1455173 + g 73 -9.5 -3.90112 | opp_overlap 1455160 1455159 CGTATCGCCATAAAG CGGCC GGTT GGCCG TTTCCTTCAGGAAGA TERM 1514 1455708 - 1455737 + g 73 -10.7 -3.63627 | opp_overlap 1455696 CCATGCCGATGCAGA TTGCCAGTGAGCG GAAA TGCTCTCTGGCGA TTTCCGCTATCGGCA TERM 1515 1456262 - 1456245 - G 88 -4.1 -5.47218 | gap 1, overlap 1456246 1456247 TCGCACCGAAAAAAA TGCCGCCC AGC GGACGG-A TAAGAAACGGCACCG TERM 1516 1456352 - 1456335 - G 85 -2.7 -5.41143 | gap 1, overlap 1456337 CATCCGGGAAAAAAA CCT-TGCC GAC GGCATAAG CGACAAAACCGTAAA TERM 1517 1456406 - 1456419 + g 83 -5.2 -5.11033 | GCGTTGCCTAGAGCG GCCG CTGTTA CGGC TTTTTTGACCTTGTC TERM 1518 1456639 - 1456611 - H 90 -12.4 -4.03413 | opp_overlap 1456615, overlap 1456615 AGTGCCCCATATAAA CGAACGCCCGGC ACATG GCCGGGCGTTAA TGAAGTCTGGTGAGA TERM 1519 1456635 - 1456615 - H 95 -15.4 -3.65294 | opp_overlap 1456615, overlap 1456611 CCCCATATAAACGAA CGCCCGGC ACATG GCCGGGCG TTAATGAAGTCTGGT TERM 1520 1456615 - 1456635 + H 95 -15.4 -3.17941 | opp_overlap 1456615 1456611 CCCCATATAAACGAA CGCCCGGC ACATG GCCGGGCG TTAATGAAGTCTGGT TERM 1521 1456823 - 1456799 - g 87 -9.9 -4.38712 | CCGATGCCGAGAAAA CCGCCGACATC GAT GATGGCGGTGG TGGCGGCTCCGACAC Atu4327 1456654 - 1457076 + | hypothetical protein Atu4328 1457393 - 1457193 - | hypothetical protein TERM 1522 1457472 - 1457509 + G 76 -7 -4.52589 | gap 1, opp_overlap 1457483 GCGGCGTGGCGACGT GATCGACATCA-CCGTG CTGGA CACGGGTGAAGACGGTC TTTTCTCTCCAACAC TERM 1523 1458371 - 1458314 - g 78 -13.3 -3.21276 | gap 1, opp_overlap 1458351 1458353, overlap 1458312 1458315 1458358 CCGTGTTCCAGAAGA GTGTGCCGACGGCGGCAGCC-CCGCTGC CCG GCAGCGGCAACTGACGCCGGCGCTACAG AAGCTGTAGCGCTTC TERM 1524 1458370 - 1458315 - g 83 -16.8 -2.52623 | gap 1, opp_overlap 1458351 1458353, overlap 1458312 1458314 1458358 CGTGTTCCAGAAGAG TGTGCCGACGGCGGCAGCC-CCGCTGC CCG GCAGCGGCAACTGACGCCGGCGCTACA GAAGCTGTAGCGCTT bexD 1457455 - 1458357 + | polysaccharide export protein impN 1459178 - 1458366 - | serine/threonine protein kinase TERM 1525 1459131 - 1459148 + g 74 -4.1 -4.78107 | overlap 1459129 1459138 1459139 ATCCAACGCATTTCG GATCTGG TCGA TCAGGTC TTTTTGCTCCTGATC impM 1460673 - 1459258 - | serine/threonine phosphoprotein phosphatase impL 1464235 - 1460756 - | IcmF family protein TERM 1526 1463109 - 1463092 - G 89 -9.8 -4.44046 | CCGACGCGAAATAAA CGCCGC GCAGAA GCGGCG CCTCGATGAGAGGCG TERM 1527 1463217 - 1463193 - G 71 -8 -4.07687 | gap 1, opp_overlap 1463192 1463200 AGTTCGGCTGGAAAA CGGAAGATACG GCCG CGTAT-TTCCG CATTCTGCTCCTGCT TERM 1528 1463483 - 1463507 + g 72 -11.3 -3.39784 | overlap 1463481 TTCCGAAAGACGCTG GCGGATGGAGC GCA GCTCCTGCCGC TGTTCTTCGGGATCG impK 1465737 - 1464232 - | OmpA-like porin TERM 1529 1465569 - 1465547 - G 73 -9.8 -3.66178 | CCGCCGAAGTGGAAA CCGGTCAGCA GCT TGTCGACCGG TAGGGTGGCCACTTT impJ 1467074 - 1465734 - | hypothetical protein impI 1468263 - 1467064 - | putative forkhead-type phosphopeptide-binding protein TERM 1530 1467172 - 1467187 + g 70 -3.2 -4.68705 | opp_overlap 1467163, overlap 1467169 CAGGAACTGCCTGAC CGGC AATGGACG GCCG TTTTCTTCGAATTGT impH 1469278 - 1468274 - | hypothetical protein TERM 1531 1469077 - 1469093 + g 71 -5.7 -4.4078 | CGAAGGCGGATTTCA GTTCGGC ATG GCCGCGC TTTTGATTAAAACCG TERM 1532 1469323 - 1469297 - R 77 -11.4 -3.51232 | overlap 1469293 1469298 GGTCTCCTAAAGCAA CGGCCGGTCAGC GGC GCGGGCCGGCCA GCGGGCAATTGGTTT TERM 1533 1469322 - 1469298 - R 76 -12.7 -2.70525 | overlap 1469297 1469293 GTCTCCTAAAGCAAC GGCCGGTCAGC GGC GCGGGCCGGCC AGCGGGCAATTGGTT impG 1471069 - 1469288 - | hypothetical protein TERM 1534 1469442 - 1469432 - G 75 -8.2 -4.1891 | GCCGGCGAATACAAA GGCC GCA GGCC GTGCGATCAGCGCAG TERM 1535 1469849 - 1469870 + g 71 -7.1 -4.25104 | GCTCGCTACCACGTC GAGCGGCCC CAGC GGTCCGCGC TTTTCATCCACGAAG TERM 1536 1470299 - 1470281 - G 71 -5.3 -4.40605 | gap 1, opp_overlap 1470282 ATCGAGAAAGAGAAA CTTCTGCG GCAG CGC-GAAG AATTCGGTGAGAAGC TERM 1537 1470653 - 1470618 - G 70 -3.1 -4.60889 | gap 1 AAGGATGCCGAAAAA GGC-GCGTCGATCGGC TGGCC GGCAAGCGTCGCTGCC GCGATCTGCAGCGGC TERM 1538 1471005 - 1471015 + g 71 -8.2 -4.07568 | opp_overlap 1471004 1471005 1470992, overlap 1471004 AACGCCGCCGCAAAG CGCG AAG CGCG TTTTCGCAGCGCAAA impF 1471571 - 1471062 - | hypothetical protein impE 1472388 - 1471564 - | hypothetical protein TERM 1539 1471976 - 1471992 + g 72 -2.1 -4.74801 | overlap 1471977 1471978 CTGCCATCGTGGCCG ATCGGCA CAT TGCCGCG TTTTTCGTCGAGTTC impD 1473779 - 1472385 - | hypothetical protein TERM 1540 1472752 - 1472780 + g 80 -14.5 -3.07113 | opp_overlap 1472742 1472740 ACATATTGCAGCATC GCGGCAAGGCGGG CGT TCTGCCTCGCCGC TTCGGTGGAATAATG TERM 1541 1473795 - 1473837 + r 70 -9.1 -3.61715 | gap 1, opp_overlap 1473800, overlap 1473796 1473797 GAGCGGGCTCCGGTG ATGAACG-GGGCCGGGGTGG CTGA TCACCCCGGTCCGTGCTCAG TTCTTGGACGGAATA TERM 1542 1473796 - 1473836 + r 76 -12.6 -2.76815 | gap 1, opp_overlap 1473800, overlap 1473795 1473797 AGCGGGCTCCGGTGA TGAACG-GGGCCGGGGTGG CTGA TCACCCCGGTCCGTGCTCA GTTCTTGGACGGAAT TERM 1543 1473797 - 1473833 + r 75 -13 -2.6563 | gap 1, opp_overlap 1473800, overlap 1473796 1473795 GCGGGCTCCGGTGAT GAACGGGGCCGGGGTGG CTGA TCACCCCGGTC-CGTGC TCAGTTCTTGGACGG TERM 1544 1473853 - 1473881 + r 70 -8.7 -3.70773 | opp_overlap 1473853, overlap 1473857 TTCTTGGACGGAATA CGGGCGACCATGC GCA GCGAGGTCGTCAG TTCTTCCATCTGCAA impC 1475315 - 1473834 - | hypothetical protein impB 1475918 - 1475409 - | hypothetical protein impA 1477039 - 1475984 - | hypothetical protein TERM 1545 1479033 - 1479050 + G 88 -6.9 -4.93365 | overlap 1479033 GGATTGTCCGATCCG CGCCGTC CGCC GGCGGTG TTTTTCCTTGTCGGC clpB 1477260 - 1479938 + | ATP-dependent Clp protease, ATP-binding subunit Atu4345 1479996 - 1480472 + | hypothetical protein TERM 1546 1480481 - 1480512 + F 100 -17.2 -4.43911 | TGCTTGATAGCCATG CGACCCGGTGCCGG CATG CCGGCACCGGAACG TTTTCATTGCAGTTT Atu4346 1480579 - 1480968 + | hypothetical protein Atu4347 1480980 - 1481480 + | hypothetical protein TERM 1547 1483433 - 1483463 + G 81 -13.3 -3.38046 | gap 1, overlap 1483394 1483431 GCACTTGCCGGCTCC GGCTCG-GGCGTCG GTTC CGATGCCTCGGGCC TCTTTCCGCTGCCGG vgrG 1481495 - 1483945 + | VgrG protein Atu4349 1483948 - 1484904 + | hypothetical protein Atu4350 1484901 - 1485737 + | hypothetical protein TERM 1548 1485876 - 1485866 - g 85 -6.8 -4.82901 | TGCTCGGTATAAAAA CAGG ATT CCTG AAACCTATTTAGATT TERM 1549 1486272 - 1486247 - g 78 -2.5 -5.03314 | TCGACTTCTAAAAAA TTTGGGGAAGC TTCA GCTCGGCCAAA TCTATTCACCGAAGT TERM 1550 1486363 - 1486379 + G 73 -10.1 -3.63805 | CTGCCATGACTATTG CGGCTCA AGC TGGGCCG TTTACCCTATACGAT Atu4351 1485765 - 1486439 + | hypothetical protein Atu4352 1486452 - 1486757 + | hypothetical protein Atu4353 1488734 - 1486896 - | hypothetical protein TERM 1551 1487558 - 1487511 - G 73 -9.9 -3.63515 | gap 3, overlap 1487512 1487537 CGCGATGGCGAAGAA TTGTGCGGGC-GGCACATGCCCGA GAA CCGGGC-TGTGCCAGCGCGC-CAG CGCTTCAAACCCGGC TERM 1552 1487557 - 1487512 - G 73 -13.4 -2.77895 | gap 3, overlap 1487511 1487537 GCGATGGCGAAGAAT TGTGCGGGC-GGCACATGCCCGA GAA CCGGGC-TGTGCCAGCGCGC-CA GCGCTTCAAACCCGG TERM 1553 1488362 - 1488348 - G 89 -4.2 -5.26316 | overlap 1488357 TGACGCCACAAAAAA GGCG ATGAACG CGCC ATTGACGATGACCGT TERM 1554 1488657 - 1488641 - G 76 -5.7 -4.62336 | AGCCGATGGTAAAAA CGGCGGG AAC CCCAACG GTGAGCCAAAATGGT TERM 1555 1489286 - 1489263 - g 75 -13.2 -2.90075 | gap 1 GGGTTTTTAATGAGA GCGCCG-ATGC ACT GCATGCGGCGC TGGAAGAGGTGCGGC Atu4354 1489103 - 1490773 + | hypothetical protein Atu4355 1492333 - 1490777 - | hypothetical protein TERM 1556 1492395 - 1492373 - R 70 -9.1 -3.63968 | opp_overlap 1492391 GTGCAAACGCGCAAA GCCCCGGAC CGACC ATCCGAGGC TGAAAGCCGCTGCTT TERM 1557 1492473 - 1492420 - R 84 -3 -5.40072 | gap 1, opp_overlap 1492430 1492430 1492471, overlap 1492428 1492429 1492430 CTGCTTTGAAAAAAA CAAGAAAATTCGAGGCTGGCGTCGC GTTAT GCGA-GCCAGCCTCGTTCGGTGTCG ACTACTGTCGGTACT TERM 1558 1492465 - 1492428 - R 100 -12 -5.25154 | gap 1, opp_overlap 1492430 1492430, overlap 1492420 1492429 1492430 AAAAAAACAAGAAAA TTCGAGGCTGGCGTCGC GTTAT GCGA-GCCAGCCTCGTT CGGTGTCGACTACTG TERM 1559 1492464 - 1492429 - R 100 -15.5 -3.69602 | gap 1, opp_overlap 1492430 1492430, overlap 1492428 1492420 1492430 AAAAAACAAGAAAAT TCGAGGCTGGCGTCGC GTTAT GCGA-GCCAGCCTCGT TCGGTGTCGACTACT TERM 1560 1492463 - 1492430 - R 100 -19 -2.78101 | gap 1, opp_overlap 1492430 1492430, overlap 1492429 1492428 1492420 AAAAACAAGAAAATT CGAGGCTGGCGTCGC GTTAT GCGA-GCCAGCCTCG TTCGGTGTCGACTAC TERM 1561 1492430 - 1492463 + r 100 -19.7 -3.12999 | gap 1, opp_overlap 1492430 1492429 1492428 1492420, overlap 1492430 AAAAACAAGAAAATT CGAGGCTGGCGTCGCG TTA TGCGA-GCCAGCCTCG TTCGGTGTCGACTAC Atu4356 1493726 - 1492710 - | hypothetical protein TERM 1562 1493040 - 1493074 + g 76 -6.2 -4.63486 | overlap 1493036 1493040 1493039 GCGGTAGATATCCTT CGGCCTGTCCGCCGAG AGT TTCGGCAGGCCGCTCG TTTTGTTCACGAGAT TERM 1563 1493825 - 1493875 + H 74 -7.6 -4.12902 | gap 1 CTCACTTTACCGTTG TTGCCGCCCGGAATGCTGTCACA CCTCAT TGTGCAAGCAT-CCGGCCGGGAA TTTTCGGGGTCGTTA TERM 1564 1494390 - 1494370 - g 76 -5.3 -4.72272 | opp_overlap 1494386, overlap 1494371 1494372 GTCCGCGACGAAAAA GGTGATGGC CAC GCCATCCTC ACGGTCAGAACCGAC Atu4357 1493959 - 1494624 + | hypothetical protein TERM 1565 1494649 - 1494673 + T 79 -11.4 -3.63627 | opp_overlap 1494644 CTCTCATGAAGGACG CGGAGAGCCC CAAAC GGGCTGTCCG TTTCCAATATGCCCC Atu4358 1495784 - 1494699 - | ABC transporter, nucleotide binding/ATPase protein Atu4359 1496608 - 1495781 - | ABC transporter, membrane spanning protein (sugar) thuF 1497507 - 1496605 - | ABC transporter, membrane spanning protein (sugar) TERM 1566 1496681 - 1496667 - G 74 -6.4 -4.32034 | overlap 1496651 1496655 CCAGCATGACGAAAA CGATCA TGA TGACCG ATATCGTCGCGCCCT TERM 1567 1497034 - 1497023 - G 73 -4.4 -4.70659 | GCCCAGAGCGAAAAA TTCG CATC CGAA CGCCAGAAGATATTG TERM 1568 1497573 - 1497524 - R 75 -12.8 -2.59935 | gap 1, opp_overlap 1497527, overlap 1497523 AAACATCCTCACAAG CTCCGATCGGGGCCGCC-GTCGC TTATC ACGACAGGCAGCCCCACCGGGAG GAACCCGTGGATGGG Atu4361 1498853 - 1497621 - | ABC transporter, substrate binding protein (sugar) Atu4362 1499819 - 1498917 - | hypothetical protein TERM 1569 1499727 - 1499706 - G 71 -9.5 -3.78934 | gap 1 CGTCTGCCAGAAGAA CGGC-TCGAA GCT TTCGAAGCCG AGATCGGCGATCTGC Atu4363 1500866 - 1499832 - | hypothetical protein thuR 1501005 - 1502069 + | LacI family transcription regulator Atu4365 1502934 - 1502059 - | hypothetical protein TERM 1570 1502248 - 1502260 + g 81 -6.2 -4.7373 | TTCTGTGTTCGTGGA CGGC TGATC GCCG TTTTTGGTAAAGTGC TERM 1571 1502600 - 1502586 - G 73 -9.2 -3.98745 | overlap 1502590 CAAGTACGTAAAGAA CCGAGC CGT GCCCGG CGACAGCCTCCTCAT sdhX 1503883 - 1503110 - | short chain dehydrogenase TERM 1572 1503915 - 1503925 + H 71 -8.2 -3.90112 | overlap 1503908 CCGGTTATCGGCCAC GCGG TGA CCGC TTTCATTCCAGCAGG gstR 1504020 - 1504919 + | LysR family transcriptional regulator Atu4368 1505385 - 1504990 - | hypothetical protein TERM 1573 1505614 - 1505649 + H 76 -12.8 -2.71144 | opp_overlap 1505614 1505619 1505642, overlap 1505619 1505642 GGATTGACTCGAATA TGAAACCGGTTACATT TGTC GATGTAAACGGTTTCA TCGTTGAGAACCGTG TERM 1574 1505649 - 1505614 - H 76 -12.1 -3.06492 | opp_overlap 1505614 1505619 1505642, overlap 1505619 1505642 GGATTGACTCGAATA TGAAACCGGTTACAT TTGTCG ATGTAAACGGTTTCA TCGTTGAGAACCGTG rbsB 1505684 - 1506706 + | ABC transporter, substrate binding protein (sugar) Atu4370 1506810 - 1508303 + | ABC transporter, nucleotide binding/ATPase protein (sugar) Atu4371 1508300 - 1509244 + | ABC transporter, membrane spanning protein (sugar) rbsC 1509246 - 1510214 + | ABC transporter, membrane spanning protein (ribose) cytR 1510218 - 1511240 + | LacI family transcriptional regulator TERM 1575 1512298 - 1512280 - g 100 -16 -4.08945 | opp_overlap 1512294 ACGATTTCGCCAAAA GCGGCGTC GAT GACGCCGC AAACCGCCGCCTTCT Atu4374 1511274 - 1512323 + | hypothetical protein TERM 1576 1512916 - 1512899 - g 71 -8.4 -4.10855 | AAAACCGGCGCAAAA GGTGCG GAATGG CGCACC GACCCCAGCCGCTCC Atu4375 1512335 - 1513504 + | hypothetical protein TERM 1577 1513758 - 1513804 + G 77 -10.9 -3.57561 | gap 2 GTACACATTGCGCAA CGCCGGAACGCTTGAGGA--GCA GCT TGCCATCCTCAACCGCGCCGGCG TTTCCGCCGTTGAAA Atu4376 1513657 - 1514481 + | hypothetical protein TERM 1578 1514536 - 1514503 - f 70 -8.7 -3.70546 | opp_overlap 1514503 1514509, overlap 1514504 CCAGTAAAACCAGAA CCGCTCCCCGGCG GCGGGTTT CGCCGGGGCGCAT GAGGTTCGACAGACG TERM 1579 1514535 - 1514504 - f 72 -12.2 -2.81604 | opp_overlap 1514503 1514509, overlap 1514503 CAGTAAAACCAGAAC CGCTCCCCGGCG GCGGGTTT CGCCGGGGCGCA TGAGGTTCGACAGAC TERM 1580 1515046 - 1515032 - g 77 -11.4 -3.66654 | GAGGCCAATGCGAAA GACGGC ATC GCCGTC GACTGGCCGATCCGT Atu4377 1514633 - 1516318 + | oxidoreductase Atu4378 1516318 - 1516878 + | hypothetical protein TERM 1581 1516919 - 1516890 - f 93 -16.3 -2.86539 | opp_overlap 1516890, overlap 1516887 CTGAACCGAGAACCA TCGGCCCGTCCGC CTTT GCGGGCGGGCCGC ATTCATGCGGCAAGA TERM 1582 1516890 - 1516920 + F 100 -16.9 -3.14132 | gap 1, opp_overlap 1516890 1516887 CTGAACCGAGAACCA T-CGGCCCGTCCGC CTTT GCGGGCGGGCCGCA TTCATGCGGCAAGAC cy2 1516948 - 1517343 + | cytochrome c2 nnrR 1518115 - 1517414 - | Crp family transcriptional regulator TERM 1583 1518136 - 1518178 + r 95 -11.3 -4.62984 | CCCTCTCCGGTGATT GGCCGCCGCCTTGGTT-CCCG CCA TGGGCAACCG-GGTGTCGGCC TTTTCTGTATCCTCA nirV 1519182 - 1518265 - | nitrite reductase, NirV precursor TERM 1584 1518365 - 1518380 + g 71 -6 -4.31329 | opp_overlap 1518341, overlap 1518366 TCAGGCGGCACGCCA ACGGCG CAGC CGCCGC TTTTCGGGTTTTTGA TERM 1585 1519292 - 1519242 - R 93 -17.5 -2.87931 | gap 1, opp_overlap 1519249 1519250 TTCAGGCCGCAGAGA GCCG-AAGGGGGAGCGCGCCGCGG CTGT CGGCGGCGCGCTCCCGTTTGCGTC AGATGCTCGATGGGG TERM 1586 1519249 - 1519284 + r 100 -21.8 -3.6608 | opp_overlap 1519242, overlap 1519250 CGCAGAGAGCCGAAG GGGGAGCGCGCCGCGG CTGT CGGCGGCGCGCTCCCG TTTGCGTCAGATGCT TERM 1587 1519250 - 1519283 + r 100 -25.3 -2.79327 | opp_overlap 1519242, overlap 1519249 GCAGAGAGCCGAAGG GGGAGCGCGCCGCGG CTGT CGGCGGCGCGCTCCC GTTTGCGTCAGATGC nirK 1520433 - 1519291 - | nitrite reductase, copper-containing TERM 1588 1520768 - 1520780 + G 78 -6.9 -4.72272 | GGTTATCTTTTCTTA CGGCT TCC GGCCG TTTTTCCTCGGCGGC Atu4383 1520670 - 1521902 + | hypothetical protein TERM 1589 1521963 - 1521929 - T 100 -20.9 -4.13014 | opp_overlap 1521929 1521934, overlap 1521934 GCGATACCGTCAAAA CAAAACGCCCCGGAA GTGAT TTCCGGGGCGTTTCG TTATCAACCGTAACC TERM 1590 1521929 - 1521963 + T 100 -19.4 -3.30124 | opp_overlap 1521929 1521934, overlap 1521934 GCGATACCGTCAAAA CAAAACGCCCCGGAAG TGA TTTCCGGGGCGTTTCG TTATCAACCGTAACC TERM 1591 1521958 - 1521934 - T 100 -17.2 -5.08255 | opp_overlap 1521929 1521934, overlap 1521929 ACCGTCAAAACAAAA CGCCCCGGAA GTGAT TTCCGGGGCG TTTCGTTATCAACCG TERM 1592 1521934 - 1521958 + T 100 -17.9 -3.9941 | opp_overlap 1521934 1521929, overlap 1521929 ACCGTCAAAACAAAA CGCCCCGGAAG TGA TTTCCGGGGCG TTTCGTTATCAACCG Atu4384 1522519 - 1521986 - | hypothetical protein TERM 1593 1522535 - 1522571 + r 83 -10 -4.11216 | gap 1, overlap 1522537 TGCATCGCCTCATCT GTCGGCTGGCGG-CGGC AAGA GCCGTCCGCCAGAGGTC TTTTCACCATGCCGC TERM 1594 1522537 - 1522569 + r 79 -11.2 -3.65542 | gap 1, overlap 1522535 CATCGCCTCATCTGT CGGCTGGCGG-CGGC AAGA GCCGTCCGCCAGAGG TCTTTTCACCATGCC Atu4385 1523047 - 1522598 - | hypothetical protein norD 1524945 - 1523047 - | nitric oxide reductase NorD protein TERM 1595 1523769 - 1523800 + g 78 -5.1 -4.8048 | gap 1 GGCGCGGCCTCAGCA CCTCGAATTGCCGC CTGAC GCGGCGGAT-GAGG TTTTTGGTGTCCGGG TERM 1596 1523977 - 1524002 + g 74 -11.1 -3.53444 | overlap 1523981 1523982 GTCGAGATCGAAGCG GAAGCGGGCGG AAGG CCGCCCCTTTC TTTCACCCAGCGTCA TERM 1597 1523981 - 1523998 + g 77 -8.3 -4.41348 | overlap 1523977 1523982 AGATCGAAGCGGAAG CGGGCGG AAGG CCGCCCC TTTCTTTCACCCAGC norQ 1525829 - 1525017 - | nitric oxide reductase NorQ protein TERM 1598 1525693 - 1525643 - G 82 -12.5 -3.59627 | gap 1, opp_overlap 1525652 1525683 ATGAAATGGTGGAAA GCGGCAGGCCGAGTTTCGCC-GCC ATAT GGCTGACGAAACGGGTCTTGCCGC AACCGGTCGGGCCTT TERM 1599 1525853 - 1525889 + r 100 -15.2 -4.05446 | opp_overlap 1525857 1525877, overlap 1525854 CCATGGTTGATGGTA AGGACCGGCTCTCC GGGGGAAAA GGAGAGCCGGTCCG TTTCTCATTCGGCGG TERM 1600 1525854 - 1525888 + r 100 -18.7 -3.02946 | opp_overlap 1525857 1525877, overlap 1525853 CATGGTTGATGGTAA GGACCGGCTCTCC GGGGGAAAA GGAGAGCCGGTCC GTTTCTCATTCGGCG TERM 1601 1525885 - 1525857 - R 79 -13.2 -2.73364 | opp_overlap 1525854 1525853, overlap 1525877 GGTTGATGGTAAGGA CCGGCTCTCC GGGGGAAAA GGAGAGCCGG TCCGTTTCTCATTCG norB 1527240 - 1525894 - | nitric oxide reductase, cytochrome b subunit norC 1527717 - 1527265 - | nitric oxide reductase, cytochrome c-containing subunit TERM 1602 1527821 - 1527835 + r 76 -9.2 -3.98804 | overlap 1527825 TCGCCCCTTTCTAGC CGCTGG CCG CCGGCG TTCTTTGCCATTTGG TERM 1603 1527825 - 1527880 + r 70 -6.9 -4.07568 | gap 2, opp_overlap 1527858, overlap 1527821 1527868 CCCTTTCTAGCCGCT GGCCGCCGGC-GT-TCTTTGCCATT TGGCAAAC AACGGCAGAGGTGCCGCCGCCGGCC TTTTCAAAGCGACAA TERM 1604 1527871 - 1527858 - R 71 -8.1 -3.91716 | opp_overlap 1527825 1527868 CCATTTGGCAAACAA CGGCA GAGG TGCCG CCGCCGGCCTTTTCA norF 1528183 - 1527884 - | NorF protein norE 1528713 - 1528180 - | nitric oxide reductase NorE protein TERM 1605 1528243 - 1528258 + g 71 -9 -3.75505 | overlap 1528252 GACGTGCCACAACGT CGTCAC CAGC GTGACG TTCTCGTTTTTCGGG Atu8040 1528839 - 1529006 + | hypothetical protein TERM 1606 1529248 - 1529264 + G 78 -4.4 -4.77036 | gap 1, overlap 1529252 ATGTCACGTTTCTGG CAGCGCC GATC GGC-CTG TTTTTCGTGCTGGCC nnrU 1529019 - 1529696 + | denitrification regulatory protein Atu4393 1530291 - 1529701 - | 3-octaprenyl-4-hydroxybenzoate carboxy-lyase Atu4394 1531844 - 1530288 - | hypothetical protein TERM 1607 1531816 - 1531833 + g 76 -12.7 -3.30771 | GGTTCGTCTGTCATG CCGCCTG TTTG CAGGCGG TTATGCGGCATGTCC Atu4395 1532221 - 1531871 - | hypothetical protein TERM 1608 1532620 - 1532635 + G 77 -8.2 -4.32034 | CCGAAGGTGGATGCG GCGGTC GAAG GGCCGC TTTTCATGCTGCTGG Atu4396 1532371 - 1532886 + | hypothetical protein Atu4397 1532877 - 1533854 + | protease TERM 1609 1534464 - 1534494 + G 93 -11.2 -4.42788 | gap 1 GCGACGATCCGGATG GGCTGCCGGTGCG CACGCT CG-ACCGGCAGTC TTTTCTGGCGTTGAA Atu4398 1533860 - 1534798 + | hypothetical protein Atu4399 1534795 - 1535172 + | hypothetical protein TERM 1610 1535535 - 1535551 + G 74 -5.8 -4.56597 | overlap 1535502 TTGCATCTGCGCCCG GCGTTG TCGTC CAGCGC TTTTTCGGCGGCAAC TERM 1611 1535858 - 1535890 + G 82 -9.7 -4.38712 | overlap 1535853 1535859 GACGCTTCCCTGCGC ACCGGCTTCGATGCG GAT CGCTTTGCAGCCGGC TTTTATGCCGATGCC TERM 1612 1535859 - 1535889 + G 78 -13.2 -3.22906 | overlap 1535853 1535858 ACGCTTCCCTGCGCA CCGGCTTCGATGCG GAT CGCTTTGCAGCCGG CTTTTATGCCGATGC Atu4400 1535270 - 1537423 + | ferrienterobactin-like protein TERM 1613 1537911 - 1537901 - g 76 -6.8 -4.56597 | CTGGTCGCTGAAAAA GGCT TGA AGCC CGGCGATATCAAGCT TERM 1614 1538225 - 1538259 + G 86 -13.4 -3.53091 | opp_overlap 1538229 1538230, overlap 1538229 GCTCTAGCGGATCCG CAAAGGGCGGCGGCGG CCG CCGCCGATGCCCTCGG TTTCCCGGCGGAGAT TERM 1615 1538229 - 1538255 + G 83 -17.2 -2.64155 | opp_overlap 1538229 1538230, overlap 1538225 TAGCGGATCCGCAAA GGGCGGCGGCGG CCG CCGCCGATGCCC TCGGTTTCCCGGCGG TERM 1616 1538255 - 1538229 - g 90 -15 -3.57462 | opp_overlap 1538225 1538229, overlap 1538230 TAGCGGATCCGCAAA GGGCGGCGGCGG CCG CCGCCGATGCCC TCGGTTTCCCGGCGG TERM 1617 1538248 - 1538230 - g 84 -17.4 -2.74263 | opp_overlap 1538229 1538225, overlap 1538229 AGCGGATCCGCAAAG GGCGGCGG CGG CCGCCGCC GATGCCCTCGGTTTC TERM 1618 1538378 - 1538410 + G 81 -8.4 -4.5954 | gap 1, overlap 1538370 GCCAAGGCGCACCCG GCCATCATC-GGCGG TCGG CGGCCGGATGACGGC TTTTATCTGGTGTAG Atu4401 1537442 - 1538425 + | hypothetical protein TERM 1619 1538598 - 1538615 + G 83 -4.8 -5.03715 | overlap 1538603 CGCGGCGATCGGGCT TCTGGC GGCGCG GCCGGA TTTTTTCGCGATCCT TERM 1620 1538641 - 1538660 + G 71 -7.8 -4.13767 | overlap 1538642 ATCCTGTCGCAGAGC GCCGTCAG GGCG CTGACGGG TTTTGCCATCGCCGC Atu4402 1538431 - 1539240 + | ABC transporter, membrane spanning protein (anion) TERM 1621 1539715 - 1539769 + G 76 -5.7 -4.60255 | gap 2, overlap 1539713 1539716 1539717 1539718 1539764 TCAGTGCCGTCGATG TCG-GCCTGCG-CCGGCATTTGCAGGA ACT TCTGGTGGATGCCGCTCGCAGGCGTGG TTTTTCCACGCTTCT Atu4403 1539237 - 1539989 + | ABC transporter, nucleotide binding/ATPase protein (anion) TERM 1622 1540053 - 1540063 + G 81 -4.6 -4.93318 | overlap 1540036 CCGCCCTGCATGGCG CGGT CTG GCCG TTTTTGTGGATTGTC TERM 1623 1540217 - 1540238 + G 80 -10.1 -4.03234 | gap 1, opp_overlap 1540217 TGGACCGATACGAAA GCGGCG-GCG GGC CGCACGCTGC TTTGTCTCGCCGGCC TERM 1624 1540302 - 1540315 + G 90 -5.9 -5.21709 | GGGCGGATACGTGGA GCCTG CTGG CGGGC TTTTTTGATCTGGCG TERM 1625 1540705 - 1540720 + G 79 -8.2 -4.57073 | opp_overlap 1540684, overlap 1540706 CGCCTGGCTGGCGCT TGCGGC CGGT GCCGCG TTTTTCGACCGGCTG Atu4404 1539986 - 1541173 + | hypothetical protein TERM 1626 1541330 - 1541319 - f 74 -3 -4.85618 | opp_overlap 1541325 1541327, overlap 1541320 AAATAATCAATAAAA TCAA ATGG TTGA ATATTCAATCCTTTT napE 1541384 - 1541569 + | periplasmic nitrate reductase protein NapE napF 1541577 - 1542077 + | periplasmic nitrate reductase, ferredoxin-like protein napD 1542070 - 1542357 + | periplasmic nitrate reductase, NapD protein TERM 1627 1542418 - 1542443 + GF 89 -13.9 -3.60792 | CATTGCGCTGCCGGC CGCCGCCCAGC CGGT GCCGGGCGGTG TTTCCGCATTGCAGA TERM 1628 1542674 - 1542661 - gf 85 -5.9 -5.06414 | overlap 1542662 TCTGCGCAAGAAAAA CGGCG TCTA CGCCA AGGATGGCGAGTTCG napA 1542332 - 1544836 + | nitrate reductase napB 1544806 - 1545297 + | periplasmic nitrate reductase small subunit napC 1545294 - 1545995 + | periplasmic nitrate reductase, cytochrome c-type protein Atu4411 1546902 - 1546039 - | LysR family transcriptional regulator TERM 1629 1547512 - 1547491 - g 88 -6.5 -4.88736 | GACGATCGATAAAAA CACCGACGG TACG CTGTCGATG AACAAATACGTCAAT TERM 1630 1549902 - 1549937 + G 84 -9.8 -4.25104 | gap 1 ACAATATGGATATTC CGTTGACCGTTGCCATC GTT GATGGC-GCGATCAATG TTTTCCTGGGAGACA TERM 1631 1550263 - 1550234 - g 80 -3.5 -5.1287 | GCGATAGGCAAAAAA GTGGATGCCGA TCTCAATG TCGGCGTCAAC AAGCTGCTTCTCATG TERM 1632 1550361 - 1550346 - g 74 -5.4 -4.46656 | opp_overlap 1550346, overlap 1550340 1550348 TGGACAAGACGAAAA TCCTCG TGGC CGAGAA CTTCTCAACCGCTGA TERM 1633 1550824 - 1550806 - g 73 -4.5 -4.72272 | overlap 1550808 1550820 TGTGCGCATGAAAAA CGGGATC GAAGA GATCCTG GCGCAGGTGCCGGGC TERM 1634 1551497 - 1551469 - g 81 -13.9 -3.34398 | overlap 1551467 GGTTCTGCGCAAATA CGGCCAGTCCG TGGTCAT CGAACTGGCCG ATGGTGAGACGCTGA rzcA 1547273 - 1553086 + | rhizobiocin/RTX toxin TERM 1635 1553117 - 1553096 - f 71 -10.1 -3.55444 | opp_overlap 1553080 1553096 GCCTGACCCTTGAAA GGCGTATCC TTCG GGATGCGCC TTTTTCTCGTTTGCG TERM 1636 1553096 - 1553117 + F 100 -12.3 -5.04325 | opp_overlap 1553096, overlap 1553080 GCCTGACCCTTGAAA GGCGTATCC TTCG GGATGCGCC TTTTTCTCGTTTGCG rspD 1553197 - 1554948 + | ABC transporter, nucleotide binding/ATPase protein (bacteriocin) TERM 1637 1555446 - 1555424 - g 77 -3.2 -4.98531 | overlap 1555425 CCGCGAAAGCAAAAA GCGCCAGCTG GAA CAGCGCGTGC GGCAGCTTCGCGATG rspE 1554951 - 1556255 + | ABC transporter, membrane spanning protein (bacteriocin) TERM 1638 1556458 - 1556442 - T 85 -9.4 -4.49958 | AGCTGACGAAAGAAA TGCCGG AACTG CCGGCA AGAAAAACGCCGTGC TERM 1639 1556493 - 1556466 - T 100 -12 -5.06414 | opp_overlap 1556466 1556467, overlap 1556467 TGCCGGCAAGAAAAA CGCCGTGCATCC TTTC GGATTCACGGCA TTTTCAGTCGATGAG TERM 1640 1556466 - 1556493 + T 83 -9.8 -4.19817 | opp_overlap 1556466 1556467, overlap 1556467 TGCCGGCAAGAAAAA CGCCGTGCATCC TTTC GGATTCACGGCA TTTTCAGTCGATGAG TERM 1641 1556467 - 1556492 + T 84 -13.3 -3.11569 | opp_overlap 1556466 1556467, overlap 1556466 GCCGGCAAGAAAAAC GCCGTGCATCC TTTC GGATTCACGGC ATTTTCAGTCGATGA TERM 1642 1556492 - 1556467 - T 89 -13.3 -3.63367 | opp_overlap 1556467 1556466, overlap 1556466 GCCGGCAAGAAAAAC GCCGTGCATCC TTTC GGATTCACGGC ATTTTCAGTCGATGA TERM 1643 1556521 - 1556554 + T 100 -2.3 -5.89947 | overlap 1556522 GAGGCGTGGTCAATG GGGCCGGATCGCT GCTTTCAA ATCAATCCGGCCG TTTTTTTTGCGTTTG Atu4415 1558485 - 1556572 - | hypothetical protein TERM 1644 1557454 - 1557438 - G 80 -10.1 -4.0641 | opp_overlap 1557447 1557448 CGTCACCCATATAAA CGACGAC GCG GCCGTCG CGGGCAATGACCACG TERM 1645 1557447 - 1557475 + g 77 -7.9 -4.36411 | opp_overlap 1557438, overlap 1557448 TATAAACGACGACGC GGCCGTCGCGGGC AAT GACCACGGCGGCG TTTTCGTGCTTGATG TERM 1646 1557973 - 1557990 + g 70 -3.3 -4.59773 | GATCTTCACGTCGTC GGCCGTC TTCG GATTGCC TTTTTCGGCATGCGG Atu4416 1559331 - 1558615 - | phosphopantetheinyl transferase TERM 1647 1559511 - 1559486 - R 100 -17.7 -4.65933 | opp_overlap 1559486 GAGTTCGAAAACAAA GGCCTTCGAAG CGAA CTTCGAAGGCC TTTTCCTGGTGTAGG TERM 1648 1559486 - 1559511 + r 100 -17.7 -4.33274 | opp_overlap 1559486 GAGTTCGAAAACAAA GGCCTTCGAAG CGAA CTTCGAAGGCC TTTTCCTGGTGTAGG gcdH 1560730 - 1559543 - | glutaryl-CoA dehydrogenase Atu4419 1560827 - 1561747 + | LysR family transcriptional regulator Atu4420 1561882 - 1562943 + | LacI family transcription regulator Atu4421 1562940 - 1563962 + | ABC transporter, substrate binding protein (spermidine/putrescine) TERM 1649 1564167 - 1564194 + G 74 -6.9 -4.31433 | overlap 1564165 1564168 1564169 GCTGGCGCTTGCATT GCCCGCCGC AATTTTCGCG GCGGCGGTC TTTCTTGTGCCGGTC Atu4422 1564129 - 1564956 + | ABC transporter, membrane spanning protein (spermidine/putrescine) Atu4423 1564953 - 1565732 + | ABC transporter, membrane spanning protein Atu4424 1565725 - 1566750 + | ABC transporter, nucleotide binding/ATPase protein (spermidine/putrescine) iunH 1566753 - 1567673 + | inosine-uridine preferring nucleoside hydrolase TERM 1650 1567719 - 1567761 + G 74 -6.1 -4.47259 | gap 1, opp_overlap 1567714, overlap 1567721 ATCTCAACGACGACA CCCTGCGCGCC-CGTGCGGT TGCC GCCGCGCGTGGTGATCAGCG TTTTGATGTTCTCAT TERM 1651 1569070 - 1569042 - g 81 -4.4 -4.91511 | AGCCCACCACAAAAA CCGGCTTCCTCA CCGGC TGGGGACGCTGG AACGGCGCCTTCGCC adeC 1567670 - 1569463 + | adenine deaminase TERM 1652 1569517 - 1569467 - T 93 -13.9 -3.78934 | gap 1, opp_overlap 1569470, overlap 1569468 GTTTTGGGATAATAA CGTCAGG-ACCGGCTGCCGCGATG TCGT CGTCGTGGCAGCCGGGGCCTGTCA GTTCACATTGTGAAG TERM 1653 1569516 - 1569468 - T 86 -15.2 -2.87146 | gap 1, opp_overlap 1569470, overlap 1569467 TTTTGGGATAATAAC GTCAGG-ACCGGCTGCCGCGATG TCGT CGTCGTGGCAGCCGGGGCCTGTC AGTTCACATTGTGAA TERM 1654 1569470 - 1569514 + T 100 -20.8 -2.55551 | gap 1, opp_overlap 1569468 1569467 TTGGGATAATAACGT CAGGACC-GGCTGCCGCGATG TCGT CGTCGTGGCAGCCGGGGCCTG TCAGTTCACATTGTG Atu4427 1570216 - 1569515 - | replicative DNA helicase Atu4428 1571644 - 1570433 - | amidohydrolase TERM 1655 1571836 - 1571815 - H 71 -4.3 -4.54727 | overlap 1571816 CTCCTGAAAGGAAAA CCGATGCCG TCAT CCGCATCGC CCGCCGCCCAGTCTC Atu4429 1571818 - 1572525 + | phosphoribosyltransferase TERM 1656 1572513 - 1572502 - f 77 -7.2 -4.36914 | CCGCTGCTGACAAAA GCCG AAGG CGGC TGGCAGGCTTGACGT Atu4430 1572731 - 1573786 + | dipeptidase Atu4431 1573837 - 1575474 + | ABC transporter, substrate binding protein (oligopeptide) TERM 1657 1575559 - 1575516 - g 78 -10.3 -3.90588 | gap 2, overlap 1575518 1575521 CATCGTTGAAGCAAA CAGCA-GGGCG-AGGCAGGGC AAAC GCCGTGCCAACGCCCGTGCTA AGGCCATTATCGGCT TERM 1658 1575557 - 1575518 - g 70 -10.7 -3.54146 | gap 2, overlap 1575516 1575521 TCGTTGAAGCAAACA GCA-GGGCG-AGGCAGGGC AAAC GCCGTGCCAACGCCCGTGC TAAGGCCATTATCGG TERM 1659 1575584 - 1575616 + G 73 -9.8 -3.57867 | overlap 1575580 TCGGCTTCGCCCTTA CCGTCATCACCACC TTTCT GGGGTTGATGGCGG TTACATTTTTTATTG TERM 1660 1575910 - 1575930 + G 90 -14.7 -3.53224 | opp_overlap 1575923 CCGCTCGGTGTGCTC GCTGCCGTG AAA CGCGGCAGC TTTGCCGACCAGGTC Atu4432 1575496 - 1576563 + | ABC transporter, membrane spanning protein (oligopeptide) Atu4433 1576560 - 1577492 + | ABC transporter, membrane spanning protein (oligopeptide) Atu4434 1577489 - 1578325 + | ABC transporter, nucleotide binding/ATPase protein (oligopeptide) Atu4435 1578322 - 1579071 + | ABC transporter, nucleotide binding/ATPase protein (oligopeptide) tnp 1579171 - 1580208 + | IS5 family transposase TERM 1661 1580263 - 1580241 - f 73 -9.1 -3.89435 | overlap 1580235 CTCAAACAACCCAAA GCCCGCC ACAGACACA GGCGGGC CGGGAAAATGCGGCT Atu4437 1580559 - 1581461 + | LysR family transcriptional regulator Atu4438 1581671 - 1583206 + | ABC transporter, substrate binding protein (oligopeptide) TERM 1662 1583254 - 1583285 + F 74 -10.8 -3.48276 | overlap 1583242 1583255 GGACTTGATCCGGCA TCCAGCCAGCCCAA GTCC TTGGGCTGACAGGG TTCTCTCCGCCGCGC TERM 1663 1583255 - 1583284 + F 72 -12.1 -2.68823 | overlap 1583242 1583254 GACTTGATCCGGCAT CCAGCCAGCCCAA GTCC TTGGGCTGACAGG GTTCTCTCCGCCGCG Atu4439 1583401 - 1584351 + | ABC transporter, membrane spanning protein (oligopeptide) Atu4440 1584351 - 1585169 + | ABC transporter, membrane spanning protein (oligopeptide) TERM 1664 1585154 - 1585192 + F 74 -9.7 -3.64821 | gap 1, opp_overlap 1585165, overlap 1585153 1585152 TGATCTGCTCGATCC GC-GCGATACCAGCTG AGCGCTTC CAGCTGATATCGCCGC TATTTCCTGTTTTTA gatA 1585223 - 1586620 + | amidase Atu4442 1586735 - 1587283 + | hypothetical protein TERM 1665 1587295 - 1587314 + F 77 -7.8 -4.2361 | opp_overlap 1587295 ATAAGACCAGCGAAA CGGGGC TTTTGCCC GCCCCG TTTTCCGCTTATGTT Atu4443 1587355 - 1587705 + | hypothetical protein TERM 1666 1588090 - 1588100 + G 71 -6.8 -4.18197 | overlap 1588083 CGGCATGGGGATGGC CCGA CCA TCGG TTTTCGCTCCGACAT Atu4444 1587919 - 1589043 + | hippurate hydrolase TERM 1667 1589051 - 1589069 + F 89 -13.8 -3.68359 | opp_overlap 1589049 1589046, overlap 1589045 CTGCGTAAAACATCC GGCGGCCG TAA TGGCCGCC TTCTGCTTTTCAGGA TERM 1668 1589567 - 1589548 - g 76 -7.2 -4.56597 | gap 1, opp_overlap 1589558, overlap 1589549 1589550 CGTCTTCTGGAAAAA GTCCGCATT CCC AATGCGG-C GAGCCGTTTCGGTGA TERM 1669 1590822 - 1590781 - g 100 -8 -5.21709 | gap 2, overlap 1590782 1590785 CCGTACACGAAAAAA CTGATGTC-GGCC-GTTCCG GTGC CGGATCCGGCCCGACGCCAG ATCCGCCGCAACATG Atu4445 1589092 - 1590942 + | ABC transporter, nucleotide binding/ATPase protein TERM 1670 1590970 - 1590987 + F 74 -6.9 -4.30719 | overlap 1590966 1590973 GCGCTGGTAGGGAAT CGGGCGG CGGG CCGCTTG TTTCTTCTCCCCAAG TERM 1671 1590973 - 1590984 + F 77 -7.2 -4.27512 | overlap 1590970 1590966 CTGGTAGGGAATCGG GCGG CGGG CCGC TTGTTTCTTCTCCCC TERM 1672 1591278 - 1591293 + G 71 -6 -4.38927 | overlap 1591276 CGGCTGGATGACGCA GCCCGC GCCG GCTGGC TTTATTATGTCGCCG Atu4446 1591236 - 1592189 + | hypothetical protein TERM 1673 1592211 - 1592222 + F 70 -3 -4.70659 | opp_overlap 1592211 ATTAATTCATCAAAA TCAA TGGT TTGA TTTTTCCATGTGCGC TERM 1674 1592539 - 1592518 - g 76 -5.7 -4.63932 | CACGCTTGAAGAAAA CGTCCTGCG CGAG CGCGTGACG ACCGATATCGCCACC TERM 1675 1593444 - 1593401 - g 78 -4.5 -4.77036 | gap 2 GCTGACTATGAAAAA GCAGCCGCCTTCGC--CAAGC CGAC GCTTGCTGCGATGGATGCCGC CGACATCACCAAACC Atu4447 1592333 - 1593646 + | ABC transporter, substrate binding protein (sorbitol) TERM 1676 1593688 - 1593659 - f 91 -15 -3.02461 | overlap 1593647 TAATCCTCCTGAAGA TCGCTGTCCGGC GCCAAT GCCGGGCAGCGA ACCTTGGGGGCGCAA Atu4448 1593675 - 1594691 + | ABC transporter, membrane spanning protein (sorbitol/mannitol) TERM 1677 1594749 - 1594767 + G 76 -6.6 -4.49937 | overlap 1594745 ATCGGCTTCACCATC GCGGCATG GGC CGTGGCGC TTTTGCTGTTCTTCC Atu4449 1594704 - 1595528 + | ABC transporter, membrane spanning protein (sorbitol/mannitol) TERM 1678 1595774 - 1595750 - g 75 -7.8 -4.1899 | gap 1, opp_overlap 1595749 CGACGCCACCGAAAA GGCACCGGCCG AGCG CGGCCT-TGCC ATGGTGTTCCAGTCC TERM 1679 1595966 - 1596002 + G 74 -11.5 -3.45571 | gap 1, overlap 1595958 CCAGCGCCAGCGCGT CGCCATCGG-CCGCGC CATCGT GCGCGAACCGAAGGCG TTCCTGTTTGACGAG Atu4450 1595541 - 1596539 + | ABC transporter, nucleotide binding/ATPase protein (sugar) mtlK 1596665 - 1598149 + | mannitol 2-dehydrogenase TERM 1680 1598346 - 1598367 + G 74 -6.5 -4.38154 | overlap 1598347 CCCTGTTCGAGGAGT ACGGTGTCG AAAC CGACATCGA TTTTCTCGACCATAT TERM 1681 1598671 - 1598705 + G 91 -7.7 -4.74103 | gap 1, opp_overlap 1598664 1598691 CGAGGATAGCCCGGC CGGCATTGCCG-CCGC AAAA GCGGCCGGCATGGGCG TTTTTGCCTTCACCG Atu4452 1598156 - 1598875 + | hypothetical protein Atu4453 1598930 - 1600507 + | ribitol kinase TERM 1682 1600529 - 1600545 + T 84 -9.3 -4.30719 | opp_overlap 1600526, overlap 1600531 1600532 AGATTGGAATTATGG CTGGCGG CTG CCGCCTG TTTCTTCTCCCCGGC TERM 1683 1600531 - 1600543 + T 76 -10.5 -3.75817 | opp_overlap 1600526, overlap 1600529 1600532 ATTGGAATTATGGCT GGCGG CTG CCGCC TGTTTCTTCTCCCCG TERM 1684 1600592 - 1600645 + T 81 -12.3 -3.61398 | gap 1, overlap 1600595 TGGTAGCCGCTCGAT CCT-GTCGCCCTGAAGCGCAATCAGC TGC GCAGTGAGCGCTTCAGGGCTGCTAGG TTCTTCACCCGGGCC TERM 1685 1600595 - 1600641 + T 75 -12.8 -2.6563 | overlap 1600592 TAGCCGCTCGATCCT GTCGCCCTGAAGCGCAATCAGC TGC GCAGTGAGCGCTTCAGGGCTGC TAGGTTCTTCACCCG Atu4454 1601409 - 1600612 - | RpiR family transcriptional regulator TERM 1686 1600838 - 1600805 - G 70 -3.1 -4.59773 | gap 1, opp_overlap 1600781 1600780, overlap 1600806 CCCCATTCGTAAAAA CGGGTGGTGATCAGAA GGG TTCTG-TAACCGCCCT TACGGGCCGTGGTCG TERM 1687 1601017 - 1601006 - G 74 -5.8 -4.56775 | overlap 1600992 AGCCGCCCGTAAAAA TGCC GGCC GGCA TCAAGCCCTTCCGGA TERM 1688 1602007 - 1602028 + G 71 -6.5 -4.28111 | gap 1, overlap 1602010 GCTCATTTCGCCGGT CACGGCCGTC ATC GCCGGCC-TG TTTCTTGATGATGTC TERM 1689 1602010 - 1602026 + G 71 -9.3 -3.73445 | overlap 1602007 CATTTCGCCGGTCAC GGCCGTC ATC GCCGGCC TGTTTCTTGATGATG Atu4456 1601741 - 1602478 + | CysZ-like protein Atu4457 1603222 - 1602440 - | endonuclease III TERM 1690 1602786 - 1602813 + g 70 -3.2 -4.58395 | GTCTTCCTGCCGACC CCCGGCAGGGTC ACCA GCTCCTCGCGGG TTTTTGGCACCTCGC Atu4458 1603260 - 1603742 + | hypothetical protein ada 1604009 - 1604881 + | 6-O-methylguanine-DNA methyltransferase TERM 1691 1604902 - 1604920 + F 85 -11 -3.94877 | TCTGAATTGTCTTTG CCGATCTC CTT GGGATCGG TTATTCTTGACCCAT Atu4460 1604934 - 1605170 + | hypothetical protein Atu4461 1605176 - 1605463 + | hypothetical protein Atu4462 1606491 - 1605460 - | transcriptional regulator talB 1606687 - 1607652 + | transaldolase B TERM 1692 1607685 - 1607661 - T 100 -7.1 -5.60993 | opp_overlap 1607659, overlap 1607663 CGCCTGACAAAAAAA GGGGGGAAC CATCTGC GTTCCCCTC GCGTTTACCAGACAT TERM 1693 1607744 - 1607720 - T 71 -8.5 -3.76952 | opp_overlap 1607720 TCCAGTCAATTGAAA CGCGATCGG GCCCCTG CCGGTCGCG TTTTTTTGTGCCCTT TERM 1694 1607720 - 1607744 + T 100 -10.7 -5.63504 | opp_overlap 1607720 TCCAGTCAATTGAAA CGCGATCGG GCCCCTG CCGGTCGCG TTTTTTTGTGCCCTT kdgR 1608526 - 1607759 - | transcriptional regulator TERM 1695 1608012 - 1607964 - G 79 -8.8 -4.19817 | opp_overlap 1607998 TCCATGGATTCAAAA CCGTTGCTGCGCACC-TGCCGCAG CCG CT-CGGCAAGGTCCGCCGGCACGG TCTCGCCGCTGCCGC Atu4466 1608724 - 1609455 + | oxidoreductase TERM 1696 1609508 - 1609472 - T 100 -19 -3.60296 | gap 1, opp_overlap 1609479, overlap 1609479 TATCGGTATGGGAAA GAGAAAAGGCGACCGGT GAAA ACCGGTCGCCTTTT-TC GTTCAGACGATGGCG TERM 1697 1609502 - 1609479 - T 100 -18.2 -4.79451 | opp_overlap 1609479, overlap 1609472 ATGGGAAAGAGAAAA GGCGACCGGT GAAA ACCGGTCGCC TTTTTCGTTCAGACG TERM 1698 1609479 - 1609502 + T 100 -18.2 -4.8622 | opp_overlap 1609472 1609479 ATGGGAAAGAGAAAA GGCGACCGGT GAAA ACCGGTCGCC TTTTTCGTTCAGACG Atu4467 1609684 - 1609511 - | hypothetical protein TERM 1699 1609602 - 1609590 - G 70 -10.5 -3.50437 | overlap 1609588 ATGAAGAACAGAATA CGGGC CAC GCCCG CCGCCGCCGCGGAAA TERM 1700 1609742 - 1609706 - R 100 -18.1 -3.28712 | TCCCCTTTTGCATAA TTTGCCAAGCCCGCCGC CCC GCGACAGGCTCAGCAAA ATGACGCGCAAAAGG TERM 1701 1609895 - 1609850 - R 80 -10.6 -3.8049 | opp_overlap 1609848 1609859, overlap 1609848 1609852 GCAAAAAAGCAAAGA GATAGAGCATTTCAGGTGAA CCGGCT TTCACCGGAAATGCTCTAGA AGCCTGTTTCCCTTG TERM 1702 1609893 - 1609852 - R 100 -17.6 -3.4556 | opp_overlap 1609848 1609859, overlap 1609850 1609848 AAAAAAGCAAAGAGA TAGAGCATTTCAGGTGAA CCGGCT TTCACCGGAAATGCTCTA GAAGCCTGTTTCCCT sitD 1610745 - 1609891 - | ABC transporter, membrane spanning protein (iron transport) sitC 1611602 - 1610742 - | ABC transporter, membrane spanning protein (iron) TERM 1703 1610994 - 1610970 - G 75 -13.5 -2.94099 | GTCGGTCAGGAGATA GGCGGTGGCGC CCG GCGTCACCACC ATGGCGACAACGAGG sitB 1612485 - 1611583 - | ABC transporter, nucleotide binding/ATPase protein (iron) TERM 1704 1612212 - 1612243 + g 100 -11.6 -5.06414 | gap 1 GAAAACTCCAGTCCA CCTCCTCTGCCTGCG GCA CGTAGGC-GACGAGG TTTTTCTTGAGCGCG TERM 1705 1612425 - 1612444 + g 71 -8.6 -4.09685 | ATGCGGTGTGGCCGT TGCGATAG GTCA CTGTCGCA TTTTGAACCGTCAGG TERM 1706 1612455 - 1612470 + g 83 -4.6 -5.14965 | TCGCATTTTGAACCG TCAGGC CGCC GCCGGA TTTTTTACTGCCCAT sitA 1613387 - 1612488 - | ABC transporter, substrate binding protein (iron) TERM 1707 1612937 - 1612959 + g 80 -10.6 -4.11692 | overlap 1612939 CATGGGCAGGGTCGA TTTCCGCAAG GCC CTTGCGGATA TTTTCCACATAGATC TERM 1708 1612939 - 1612957 + g 88 -13.2 -3.65542 | overlap 1612937 TGGGCAGGGTCGATT TCCGCAAG GCC CTTGCGGA TATTTTCCACATAGA TERM 1709 1613277 - 1613301 + g 84 -10.7 -4.25104 | CATATCGGCGATGAT GGTGAAGGTGG TGA CCACCTTCGGC TTTTCCTGCGCGACG TERM 1710 1613502 - 1613532 + H 74 -2.4 -5.08824 | overlap 1613503 CCGAAATTGGTGCGT TTTTGGCCGGACGG AGG CAGCCCGGTTAAAC TTTTTTCAATGAGAA TERM 1711 1614051 - 1614027 - g 70 -10 -3.53091 | opp_overlap 1614025 1614011 1614006 1614045, overlap 1614008 1614005 AGCTGCGCTCGGAAA TGCGCGGC CGCGCCATT GCCGCGCA GGTGGTCTTCATTCC Atu4472 1613672 - 1614580 + | hypothetical protein TERM 1712 1614788 - 1614811 + T 100 -12.5 -4.329 | opp_overlap 1614779, overlap 1614802 ACGAACGAGGTTATC GGGAGCTTC TCACGC GAAGCTCCC TTTCTTCGTCTCTTC lysS 1616326 - 1614827 - | lysyl-tRNA synthetase gltX 1618033 - 1616576 - | glutamyl-tRNA synthetase Atu4475 1620017 - 1618245 - | transporter TERM 1713 1618791 - 1618755 - G 70 -5 -4.56597 | gap 1, overlap 1618766 GGCGGCGGCGAAAAA GGCAACCGA-AACCGGC ACCA GCCCGCTGCCGGCGGCC AGCATGGCGGCGGCC TERM 1714 1618786 - 1618766 - G 71 -8.9 -3.80083 | overlap 1618755 AAAAGGCAACCGAAA CCGGCACCA GCC CGCTGCCGG CGGCCAGCATGGCGG TERM 1715 1618836 - 1618826 - G 71 -8.2 -4.12188 | overlap 1618827 CGATGACGGGCAAAA GCGC CCG GCGC TGCACGCCGAGAAGG TERM 1716 1619428 - 1619398 - G 87 -16.9 -3.05463 | ACGTCCTCCACCGAA GCCTGCTGGCGGT TTCGC ACCGGCAGCAGGC GGTAACCGAAGGTGA Atu4476 1621017 - 1620256 - | hypothetical protein Atu4477 1621886 - 1621200 - | TetR family transcriptional regulator TERM 1717 1622077 - 1622065 - g 70 -10.5 -3.4811 | overlap 1622063 CGGCCCAGAAGAATA GCGCG GTT CGCGC CGTCAACGATGCGGA emrA 1621965 - 1623263 + | multidrug resistance efflux pump TERM 1718 1623765 - 1623793 + G 71 -8.7 -3.82946 | overlap 1623766 CTCGTCGCCACGCTT GCGCCCACCATCG GTC CGACGGTCGGCGG TTATCTTTCCAATGC TERM 1719 1623766 - 1623792 + G 70 -12.2 -2.89285 | overlap 1623765 TCGTCGCCACGCTTG CGCCCACCATCG GTC CGACGGTCGGCG GTTATCTTTCCAATG emrB 1623285 - 1624868 + | MFS permease TERM 1720 1624899 - 1624922 + F 100 -16 -5.79595 | opp_overlap 1624916 ATCCACCGCAGAGCT GGGGCCGTCG GAAA TGACGGCCCC TTTTTTGTTTTGGCA TERM 1721 1624959 - 1624946 - f 100 -3.7 -6.06723 | overlap 1624916 TTTGGCAAAAAAAAA GCGCG TGTC CGAGC GCCAGAGGCTGTTGA Atu4480 1625108 - 1625755 + | hypothetical protein Atu4481 1625848 - 1626870 + | LacI family transcription regulator TERM 1722 1627529 - 1627512 - g 76 -5.5 -4.72272 | overlap 1627514 GGGCTTGATGAAAAA CACATGC CGTC GCTTGTG GAAGGCACGGATGAG xylB 1626918 - 1628372 + | xylulokinase TERM 1723 1629473 - 1629483 + G 71 -6.8 -4.14739 | overlap 1629462 ACTGGCCATGGCCAA TGCC TTC GGCA TTTTCGGCTCCATCG xylA 1628616 - 1629926 + | xylose isomerase Atu4484 1630402 - 1629917 - | hypothetical protein bgl 1630604 - 1631983 + | beta-glucosidase TERM 1724 1632330 - 1632319 - g 73 -4.4 -4.71828 | ATGCCACCAAGAAAA TGGA TCCT TCCA AGACAGTCGCGGAAG Atu4486 1632276 - 1632905 + | nitroreductase TERM 1725 1632930 - 1632965 + F 100 -15.4 -5.53079 | opp_overlap 1632926, overlap 1632931 CGTCGCGAAATCTTG ACTGCCGCAGGGCCGC CGAG GCGGCTTTGCGGTAGA TTTTTTCTCTCTTTT TERM 1726 1632931 - 1632964 + F 100 -18.9 -3.88187 | opp_overlap 1632926, overlap 1632930 GTCGCGAAATCTTGA CTGCCGCAGGGCCGC CGAG GCGGCTTTGCGGTAG ATTTTTTCTCTCTTT TERM 1727 1633528 - 1633504 - g 75 -7.7 -4.2717 | opp_overlap 1633520, overlap 1633507 AGCACTCGATGAAAA GAGCCTGCGCA CGC TGCGCCGGTCC GTCGGCATGATCTTC Atu4487 1633274 - 1634314 + | ABC transporter, nucleotide binding/ATPase protein Atu4488 1634304 - 1634972 + | ABC transporter, membrane spanning protein Atu4489 1635024 - 1635803 + | outer membrane lipoprotein TERM 1728 1635831 - 1635852 + F 100 -13.7 -5.63517 | opp_overlap 1635828 TGGTGGAAATGAGGA CCTCTCCCG TTCG CGGGGGAGG TTTTTTGTTTGGAGA TERM 1729 1636846 - 1636867 + G 91 -7.9 -4.78107 | gap 1 GCCGGTGGTCTTTAC CGCGCTCGGC ATT GCCG-GCACG TTTTTCCTGGTGCTG Atu4490 1636040 - 1638244 + | GGDEF family protein Atu4491 1639412 - 1638468 - | hypothetical protein Atu4492 1640605 - 1639697 - | hypothetical protein TERM 1730 1640478 - 1640446 - G 75 -14.1 -2.90212 | GGATCAGGCGATAGA GCGCCCGCAACCGCT TGA AGCGCTTGCGGGCAT CGTGCACCGCCTCAT Atu4493 1641077 - 1640589 - | hypothetical protein TERM 1731 1641171 - 1641161 - H 91 -6.8 -5.252 | TATCTGGATAAAAAA TGGC CCC GCCA TGCCTCGACATCAAA TERM 1732 1641563 - 1641544 - g 76 -5.6 -4.71426 | gap 1, opp_overlap 1641562 CCGGCATCAATAAAA GCGTGCTGG AAG CC-GCGCGC GGTTCCAGGGTGCCG kdgA 1641249 - 1641887 + | keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase TERM 1733 1641867 - 1641887 + F 70 -6.7 -4.08945 | overlap 1641868 1641870 AAGCTTGCTGCCGAA GCGGCTGCG CTG CGCGGCTGA TTTTGCGCAGCTGAT TERM 1734 1641911 - 1641948 + F 100 -23.7 -4.1891 | opp_overlap 1641918 AGCTGATATGAGCTC TGTCAAACCCGTTCACG AAGG CGTGAGCGGGTTTGACA TTTGTATTCGGCCCA TERM 1735 1641941 - 1641918 - f 81 -12.4 -3.5393 | opp_overlap 1641911 ATGAGCTCTGTCAAA CCCGTTCACG AAGG CGTGAGCGGG TTTGACATTTGTATT TERM 1736 1641976 - 1642004 + F 79 -7.5 -4.4261 | CCACGGCTTCCTATC TCCCCTGTAGA TTTGACC TCTACAGGAGA TTTTGATGTTCGACG Atu4495 1642010 - 1642705 + | hypothetical protein Atu4496 1642963 - 1643655 + | acetyltransferase Atu4497 1643642 - 1643887 + | hypothetical protein TERM 1737 1643878 - 1643914 + T 75 -5.9 -4.60713 | gap 1, overlap 1643884 GTACCAGCGCCGCCG CGACGG-GTAGGGCAC TAAAAT GTGCTCTACTTCTTCG TTTTATCGTATTTTC TERM 1738 1643884 - 1643907 + T 76 -8.9 -3.9978 | overlap 1643878 GCGCCGCCGCGACGG GTAGGGCAC TAAAAT GTGCTCTAC TTCTTCGTTTTATCG Atu4498 1645017 - 1643968 - | hypothetical protein TERM 1739 1644538 - 1644571 + g 89 -16.7 -3.23692 | opp_overlap 1644513 1644511 1644528 GAACAGCGCCACCAT GGCGAAGCTGGCGAT CTCC ATCGCCTGCGTCGCC TTGGTCATGGTGATG Atu4499 1645778 - 1645011 - | hypothetical protein TERM 1740 1646391 - 1646414 + G 77 -3.8 -4.87665 | overlap 1646392 CGGCCTACCTGATCC TCGATTTTGC CGGG GCGAAAGCGG TTTTTATAAATGCCA setA 1645850 - 1647082 + | MFS permease Atu4501 1648287 - 1647295 - | hypothetical protein TERM 1741 1648515 - 1648535 + r 79 -13.3 -2.75064 | overlap 1648513 1648497 CTGTCCTGCCGGACA TCTCCCCCT CAA GGGGGGAGA TCGTTCCGTGGCGAG cobW 1649899 - 1648772 - | cobalamin synthesis protein Atu4503 1650815 - 1650015 - | creatinine amidohydrolase TERM 1742 1650242 - 1650229 - G 70 -3.8 -4.58685 | AAACGCTGTGAAAAA TCGC TCTGGC GCGA GGGGAAATTGGCGGC TERM 1743 1650995 - 1650977 - g 90 -4.5 -5.44721 | AGGACGCCAAAAAAA GGGATGA GAATT TCAACCC GGAGGAACTGGCGCA Atu4504 1650895 - 1651404 + | MarR family transcriptional regulator TERM 1744 1652408 - 1652380 - g 77 -10.9 -3.63991 | opp_overlap 1652379 1652396 GACGACCTGGAAGAA GCGGCCATCGCCA CCC CGGCGCTGACCAC CGTTTCCAACGGCCA pckR 1651537 - 1652559 + | LacI family transcription regulator Atu4506 1652752 - 1652979 + | hypothetical protein TERM 1745 1653404 - 1653431 + G 71 -5.4 -4.4078 | overlap 1653405 TGATGGCAAATGGGT TGGCGAAGGCCC GTTT GCGCTATCGCCG TTTTCGTTGCGCGGC Atu4507 1653012 - 1653974 + | dehydrogenase TERM 1746 1654098 - 1654076 - T 73 -9.1 -3.78775 | opp_overlap 1654075 1654078 CCGCGCATGACGAAA GAGGTGAGC TTGGC GCTCGCCTC CTGTCTGTCCCTATT Atu4508 1655236 - 1654109 - | oxoreductase iolB 1656272 - 1655460 - | hypothetical protein iolE 1657280 - 1656372 - | hypothetical protein iolD 1659108 - 1657282 - | acetolactate synthase TERM 1747 1657963 - 1657990 + g 80 -10.5 -4.08945 | GTTCACATGCTCCTC GCCCGGTGCCG CCGTAT CGGCATCGGCC TTTTCGAACCATGCT iolC 1660940 - 1659105 - | myo-inositol catabolism IolC protein TERM 1748 1659361 - 1659387 + g 70 -3.6 -4.65895 | overlap 1659363 1659363 1659372 CCCCGCACGTAAGGG TCGTTGCGATGC ACG GCGTCGCAGGCA TTTTTCCATGCCGCC TERM 1749 1660998 - 1661012 + r 76 -2.8 -5.01732 | opp_overlap 1660986, overlap 1661000 AGACGAGCGCCCGAT CGTGAT AAG ATCAAG TTTTTTCAAAAGGTT Atu4514 1662042 - 1661227 - | RpiR family transcriptional regulator TERM 1750 1662084 - 1662109 + r 100 -9.1 -5.00616 | overlap 1662086 CGTGTGCACTTTAGC CGCAATGGAAT TTTT ATTCCATTGGG TTTTTTGGAAGCCGA livF 1662860 - 1662144 - | ABC transporter, nucleotide binding/ATPase protein (branched chain amino acid) livG 1663605 - 1662841 - | ABC transporter, nucleotide binding/ATPase protein (branched chain amino acid) livM 1664609 - 1663602 - | ABC transporter, membrane spanning protein (branched chain amino acid) livH 1665474 - 1664611 - | ABC transporter, membrane spanning protein (branched chain amino acid) TERM 1751 1664703 - 1664683 - G 71 -5.4 -4.29348 | opp_overlap 1664695 CAGATAAAAGAAGAA CTCGCC ATATTCCGG GGCGAG ATACCGCCCGGTCGT TERM 1752 1664932 - 1664950 + g 76 -12.4 -3.28712 | CGTGCGCACGCCGAG TGCCGCCG CCA TGGCGGCA TTATCGACGGCGGCA TERM 1753 1665520 - 1665485 - R 76 -3.3 -5.03314 | gap 3, opp_overlap 1665510 1665513 1665516 TGCATGCTGAAAAAA CTCC-TCCCGG-TGCAGC GAT GCC-CATCCGGGCCGGAG ACGGGCCGCTCTTGG TERM 1754 1665516 - 1665548 + r 76 -12.5 -2.80195 | opp_overlap 1665485, overlap 1665510 1665513 GATGCCCATCCGGGC CGGAGACGGGCCGCT CTT GGCGGCCCGACAACG TCGTTAATGCTGCCT livJ 1666737 - 1665565 - | ABC transporter, substrate binding protein (branched amino acid) Atu8198 1667077 - 1667451 + | hypothetical protein TERM 1755 1667472 - 1667451 - T 74 -10.1 -3.63744 | overlap 1667449 TGCGTCGGCAAAATA GGCGAACCG CCTC CGGTTCGGC GGCGGCCAATGCACC TERM 1756 1667516 - 1667486 - T 71 -12 -2.52464 | opp_overlap 1667486, overlap 1667491 GCGGCGGCCAATGCA CCATATGCCCCA CGCTAGC TGGAGCATATGG TCTTCACAGGTCATT Atu4521 1668359 - 1667535 - | AraC family transcriptional regulator TERM 1757 1667990 - 1668003 + g 89 -4.5 -5.1971 | CCGGCGGCTGGACTT CGACG AACA TGTCG TTTTTCATTTTTAAT Atu4522 1670213 - 1668480 - | hypothetical protein TERM 1758 1669475 - 1669499 + g 84 -3.3 -5.24129 | overlap 1669476 1669477 GGCCGGGTTTCAGGC CGCGGTCACCC AGC GGGCGGCCGGA TTTTTTCTGGAAGAA TERM 1759 1670061 - 1670072 + g 95 -7.2 -5.45652 | GGCGCTGCGGATGCG GGCG CTGA CGCC TTTTTTCTTCAGCCT Atu4523 1671067 - 1670219 - | ABC transporter, membrane spanning protein (oligopeptide) Atu4524 1671868 - 1671074 - | ABC transporter, membrane spanning protein (oligopeptide) TERM 1760 1671509 - 1671488 - G 79 -13 -3.55761 | GATGTAGCTTGCAAA GCCGCCCA TGCCGC TGGGCGGC AGCCAGCCGAGCGTG TERM 1761 1672036 - 1672066 + r 80 -9 -4.08216 | gap 1, opp_overlap 1672033, overlap 1672036 CGGGAAGAGAGACCC G-GCCTTGCCCGC GGGATG GCTGGCAAGGCGC TTTTAGGGAGGATCA Atu4525 1673623 - 1672088 - | ABC transporter, substrate binding protein (oligopeptide) TERM 1762 1673573 - 1673561 - G 70 -10.5 -3.53012 | CGGTGCGGCGGTAAA GGCCG TGG CGGCC ATGGCAAGCGCGACG Atu4526 1675485 - 1673665 - | ABC transporter, nucleotide binding/ATPase protein Atu4527 1675567 - 1675728 + | hypothetical protein Atu8041 1675753 - 1675908 + | hypothetical protein Atu4528 1676076 - 1676378 + | hypothetical protein TERM 1763 1676420 - 1676386 - T 100 -23.7 -4.4078 | gap 1, opp_overlap 1676381 1676380 1676388 1676389 TGCCTTGAACGAAAA CGGGCCGCAG-CGGCA TTTC TGCCGGCTGCGGCCCG ATCGAATTGCTGTGC Atu4529 1678343 - 1676442 - | hypothetical protein TERM 1764 1678024 - 1677997 - G 77 -11.2 -3.65902 | CCGAGCTCATGGAAA TCGGCCGCAGCG CGGT CGATGCCGCCGA GCGAGACCTGAGAGA TERM 1765 1679008 - 1679024 + G 75 -2.2 -4.90917 | opp_overlap 1679008 1679018, overlap 1679019 CTGTCTTTTTACAAC GTCTCG AACAC CGAAAC TTTTTCGTTCAATTT Atu4530 1678465 - 1679157 + | TetR family transcriptional regulator TERM 1766 1679152 - 1679185 + T 91 -14.7 -3.05384 | gap 1, opp_overlap 1679152 AGGATCGGGAAAAAA GGTTGATGAGGTGGCG TAG CGCCACCCCAT-AACC TTCGATGCCAAGACC TERM 1767 1679185 - 1679152 - T 100 -16.9 -5.03715 | gap 1, opp_overlap 1679152 AGGATCGGGAAAAAA GGTTGATGAGGTGGCG TAG CGCCACCCCAT-AACC TTCGATGCCAAGACC aroQ 1679575 - 1679132 - | 3-dehydroquinate dehydratase TERM 1768 1679366 - 1679386 + g 85 -15.4 -3.18582 | CGGATTGATGACGAT GCCCGCGG ACTTG CCGCGGGC TTCGTGGATCCAGTC TERM 1769 1679450 - 1679438 - G 75 -2.6 -5.00616 | GCTCTGGGCAAAAAA CAGC TCGTG GCCG GCGGCTTCAGCGATG aroE 1680441 - 1679572 - | shikimate 5-dehydrogenase TERM 1770 1680401 - 1680428 + g 91 -6.2 -5.39721 | overlap 1680397 1680402 GAAAGCTGGATGTCG GCGCCTATCAGG CCGA CCTTGTAGGCGG TTTTTTCTGTCATGA TERM 1771 1680402 - 1680427 + g 71 -9.7 -3.82748 | overlap 1680397 1680401 AAAGCTGGATGTCGG CGCCTATCAGG CCGA CCTTGTAGGCG GTTTTTTCTGTCATG Atu4533 1681274 - 1680513 - | ABC transporter, nucleotide binding/ATPase protein (amino acid) Atu4534 1682141 - 1681305 - | ABC transporter, substrate binding protein (amino acid) Atu4535 1683017 - 1682178 - | ABC transporter, substrate binding protein (amino acid) TERM 1772 1683071 - 1683085 + r 77 -8.5 -4.07568 | GACGATTAGCGGGAT GCGGC CTGCA GCCGC TTTTCAACGCCGGCG Atu4536 1683711 - 1683061 - | ABC transporter, membrane spanning protein (amino acid) Atu4537 1684390 - 1683722 - | ABC transporter, membrane spanning protein (amino acid) pcaB 1685820 - 1684759 - | 3-carboxy-cis,cis-muconate cycloisomerase pcaG 1686453 - 1685833 - | protocatechuate 3,4-dioxygenase alpha chain pcaH 1687196 - 1686456 - | protocatechuate 3,4-dioxygenase beta chain pcaC 1687627 - 1687193 - | carboxymuconolactone decarboxylase TERM 1773 1687534 - 1687578 + g 79 -8.7 -4.28018 | gap 4, overlap 1687535 AGTCGGACGTCATGG TCTG-CGCGCGGTTGACATGGGC GTC GCCCA-G-C-ACCGCGCGGCGGG TTTTCATGCCCTGTT pcaD 1688428 - 1687631 - | beta-ketoadipate enol-lactone hydrolase TERM 1774 1688324 - 1688308 - G 76 -12.3 -3.29144 | opp_overlap 1688288 CGAGCGCCTCGATAA CCGCATC CCA GATGCGG AAATCGGTGCCGAGC TERM 1775 1688985 - 1689005 + G 74 -3.9 -4.8622 | overlap 1688987 CGTCGGGCGTCTCGC CGCGCCA CAGAAAA TGGCGGG TTTTTCCTTCGAGCA pcaQ 1688524 - 1689459 + | LysR family transcriptional regulator pobA 1690703 - 1689531 - | 4-hydroxybenzoate 3-monooxygenase pobR 1690822 - 1691745 + | AraC family transcriptional regulator pcaR 1692476 - 1691715 - | IclR family transcriptional regulator pcaI 1692615 - 1693322 + | 3-oxoadipate CoA-transferase subunit A pcaJ 1693319 - 1694014 + | 3-oxoadipate CoA-transferase subunit B pcaF 1694025 - 1695230 + | beta-ketoadipyl CoA thiolase Atu4550 1695677 - 1696705 + | LacI family transcription regulator TERM 1776 1697853 - 1697839 - g 74 -11.4 -3.53224 | GACGCGGCGCTGAAA CTCGCC AAG GGCGAG ACCATCGACAAGAAG Atu4551 1696990 - 1697931 + | ABC transporter, substrate binding protein TERM 1777 1698419 - 1698439 + G 73 -9 -3.97368 | gap 1 GCCGAACTGGAGACC GGCC-TGCC TGAT GGCACGGCC TTTGTCGGTTCCAAC Atu4552 1698068 - 1698991 + | ABC transporter, substrate binding protein TERM 1778 1699015 - 1698992 - f 76 -9.4 -3.9392 | opp_overlap 1698991 1698992 1698995 GCTTACGCGAAATAA GCCCCGGGGC CTCG GCCCCGGTCC GTTTATCACTCCACT TERM 1779 1698995 - 1699012 + F 83 -14.1 -2.71325 | opp_overlap 1698992, overlap 1698992 1698991 TACGCGAAATAAGCC CCGGGGC CTCG GCCCCGG TCCGTTTATCACTCC iolH 1699041 - 1699937 + | myo-inositol catabolism protein iolG 1699948 - 1700958 + | myo-inositol 2-dehydrogenase TERM 1780 1701267 - 1701281 + G 80 -11.4 -3.76811 | opp_overlap 1701269, overlap 1701265 ATGTGCCCGCTCAAT GACGGC ACG GCCGTC TCTTTTGATAATCTA Atu4555 1700967 - 1701752 + | hypothetical protein TERM 1781 1701758 - 1701787 + F 100 -14.9 -3.85817 | overlap 1701759 GGCGCTCTGACCGCT TTGCCGCCCGCGG TTCA CTGCGGGCGGCGC TTTATGGGCGGGGAT TERM 1782 1701759 - 1701786 + F 95 -18.4 -2.91276 | overlap 1701758 GCGCTCTGACCGCTT TGCCGCCCGCGG TTCA CTGCGGGCGGCG CTTTATGGGCGGGGA TERM 1783 1702557 - 1702585 + G 79 -14.7 -2.87132 | overlap 1702548 1702555 GGCGCACGACGATCC GGCGTCGTTATGA CGG TTATAGCGACGCC TATCTCGCGGCGGGC purR 1701944 - 1703005 + | LacI family transcription regulator Atu4557 1703794 - 1703015 - | ABC transporter, membrane spanning protein (sugar) Atu4558 1705062 - 1704067 - | ABC transporter, membrane spanning protein (sugar) Atu4559 1706167 - 1705064 - | ABC transporter, nucleotide binding/ATPase protein (sugar) TERM 1784 1705815 - 1705833 + g 76 -10.2 -3.84451 | overlap 1705802 1705798 ATGGCGAGCATACGC GCCGCCTC GTT GATGCGGC TTTCGATTTCCGCCC TERM 1785 1706186 - 1706208 + r 71 -7.6 -3.92324 | opp_overlap 1706188, overlap 1706191 ATGCTCCCTTCATCA GAGCCCGTCG TCG CGACGATCTC TTTGATATTCCAGCC Atu4560 1707528 - 1706167 - | polygalacturonase TERM 1786 1706865 - 1706894 + g 76 -9.1 -4.08216 | TGTCGGCGCAGACCC CCACCGCCTTGCC ATCC GGCCCGGCGCTGG TTTTGAGGCAGATGC Atu4561 1708619 - 1707525 - | hypothetical protein Atu4562 1711155 - 1708633 - | hypothetical protein TERM 1787 1709002 - 1708983 - G 70 -10.6 -3.53012 | overlap 1708995 CGTTCGTGGCGTAAA GCGCCGCG AAAC CGCGGCCC GAACGGGTGATGAGC TERM 1788 1711274 - 1711248 - H 78 -5.9 -4.68908 | TTTACGCAAAACAAA CAGCTTGAC GTTTATTCT GTCAAGCCG CAAAACATTATAAAT TERM 1789 1712426 - 1712414 - g 71 -6.9 -4.28254 | GCTGAAGAGCGAAAA CGCCA AGG CGGCG ATGCAGGTCTTCCTC Atu4564 1711350 - 1712630 + | ABC transporter, substrate binding protein (sugar) TERM 1790 1712704 - 1712672 - f 76 -12 -3.05715 | opp_overlap 1712695, overlap 1712674 1712677 AATTCGGCCATCGAA GACCATGCCCGGAG GCTCT CTCCGGGCATATCC ATCCCCTCCTTGCGA TERM 1791 1712702 - 1712674 - f 72 -11 -3.08679 | opp_overlap 1712695, overlap 1712672 1712677 TTCGGCCATCGAAGA CCATGCCCGGAG GCTCT CTCCGGGCATAT CCATCCCCTCCTTGC TERM 1792 1712699 - 1712677 - f 83 -14.9 -2.75992 | opp_overlap 1712695, overlap 1712674 1712672 GGCCATCGAAGACCA TGCCCGGAG GCTCT CTCCGGGCA TATCCATCCCCTCCT TERM 1793 1712795 - 1712821 + F 86 -10.1 -4.2558 | gap 1, opp_overlap 1712787, overlap 1712797 TTTAAACCTGATGAC GAGGCG-CGCGG AAAA CCGCGTCGCCTG TTTTCGTCACGCGTC TERM 1794 1712797 - 1712819 + F 86 -12.7 -3.73042 | gap 1, opp_overlap 1712787, overlap 1712795 TAAACCTGATGACGA GGCG-CGCGG AAAA CCGCGTCGCC TGTTTTCGTCACGCG Atu4566 1712863 - 1714845 + | serine protease Atu4567 1716087 - 1714939 - | ROK family transcriptional regulator TERM 1795 1715711 - 1715689 - G 72 -13.4 -2.5092 | opp_overlap 1715689, overlap 1715646 1715688 CAACAGCCGATCAAG CGCCTGCGAC AAG GCCGCAAGCG TCTCCTCCCGGTCTT TERM 1796 1716839 - 1716823 - g 71 -6.5 -4.17048 | CTGGGCCGAAAAGAA CCCCAAG CGG CTTGGCG TCACCCTGCCGGCCA Atu4568 1716233 - 1717462 + | ABC transporter, substrate binding protein TERM 1797 1717471 - 1717518 + F 84 -13.4 -3.14344 | gap 1, opp_overlap 1717463 CCAGTAACGCCGTCG GGATCACCGGACCGTGC-GGC CGCAAGT GCCAGCACGGTCCGGATACCC TTGGTCAAAAAAATA Atu4569 1717549 - 1718589 + | ABC transporter, nucleotide binding/ATPase protein TERM 1798 1718835 - 1718847 + G 71 -6.9 -4.25104 | overlap 1718821 TCGCTTGCGGCTTCG GTGCC GCT GGCGC TTTTGATCCGCAGGA Atu4570 1718589 - 1719443 + | ABC transporter, membrane spanning protein TERM 1799 1719769 - 1719797 + G 70 -5.1 -4.48987 | GGCGATGGCGCGGTT TCCCTTCCGGCTG AAA CGGCTGGTGGAGA TTTTCATTCTGGCGC Atu4571 1719443 - 1720306 + | ABC transporter, membrane spanning protein Atu4572 1720353 - 1721249 + | hypothetical protein TERM 1800 1721288 - 1721308 + G 100 -12.5 -4.56597 | opp_overlap 1721288 GCCATCATCGAAGAA GCGATGGGC CTT GCCCTTCGC TTTTTCGAGGCGCGC TERM 1801 1721308 - 1721288 - g 82 -12.5 -3.69395 | opp_overlap 1721288 GCCATCATCGAAGAA GCGATGGGC CTT GCCCTTCGC TTTTTCGAGGCGCGC TERM 1802 1721408 - 1721392 - g 75 -7.9 -4.17657 | opp_overlap 1721399 TACCACAGTGGAAAA GCTGGTC CGC GACCGGC TGGCGGCGGCGTTTC TERM 1803 1721809 - 1721822 + G 79 -8.1 -4.57073 | GATCGGCCTTGCCTT TGCCG CGCG CGGCA TTTTTGACGGCCATC Atu4573 1721246 - 1722031 + | inositol monophosphatase family protein TERM 1804 1722046 - 1722075 + T 70 -10.1 -3.31931 | gap 1, opp_overlap 1722043 1722046, overlap 1722068 1722069 AACTTTTTGAAAGCA GGTGCTGGGT-GCT CCG AGCCACTCAGCATC TTGCTGGTTCTCTGA TERM 1805 1722087 - 1722097 + T 76 -5.4 -4.82901 | overlap 1722081 CATCTTGCTGGTTCT CTGA ACC TCAG TTTTTCTGGGCCAGA Atu4574 1722843 - 1722094 - | dehydrogenase Atu4575 1722898 - 1723863 + | AraC family transcriptional regulator Atu4576 1725070 - 1723997 - | ROK family transcriptional regulator TERM 1806 1724236 - 1724277 + g 74 -11.7 -3.53012 | gap 2 CGGGGTCGATCGTTC GGGCAACGG-TCAGC-GCG AGCAAG CGAAGCTGATCCGTTGCCC TTTCAAGCCAGGCAA TERM 1807 1725521 - 1725552 + G 72 -10.9 -3.34398 | opp_overlap 1725531, overlap 1725517 GGTCTATTCTGCAGC GCCGCAGCAACTC ATGGAC GAGTTGTTGCCGC TGTTTGAAAAGAAGA TERM 1808 1725666 - 1725686 + G 71 -8.3 -4.07885 | GACGTGATCTGGAGC GTTGATGGC ACC GTCATCGAC TTTTCCGCCGACCTC Atu4577 1725414 - 1726406 + | ABC transporter, substrate binding protein TERM 1809 1726446 - 1726407 - f 93 -15.6 -3.15544 | opp_overlap 1726404, overlap 1726409 CTCGACGTCCAGTAA GACGTTGAGGGCGGCGGC GAAG GCCGCCGTCCCCACGGTC GCATTCATAATCGCA TERM 1810 1726443 - 1726409 - f 93 -15.7 -3.14051 | gap 1, opp_overlap 1726404, overlap 1726407 CGACGTCCAGTAAGA CGTTGAGGGCGGCGGC GAAG GCCGCCGTCCCCA-CG GTCGCATTCATAATC Atu4578 1726518 - 1727603 + | ABC transporter, nucleotide binding/ATPase protein TERM 1811 1728085 - 1728097 + G 76 -6.3 -4.62783 | GGGCATCGTGATGGT CTTCA GCC TGAAG TTTTTCCCCTACATC Atu4579 1727600 - 1729285 + | ABC transporter, membrane spanning protein TERM 1812 1729342 - 1729314 - f 93 -12.5 -4.02719 | gap 1, overlap 1729317 TCATGAAAGACTAAA GCA-GCGGCGAC CGGCGT GTCGCCGCCTGC TCCCCTCTGCAAGGA TERM 1813 1729338 - 1729317 - f 81 -13 -3.04755 | overlap 1729314 TGAAAGACTAAAGCA GCGGCGAC CGGCGT GTCGCCGC CTGCTCCCCTCTGCA TERM 1814 1729432 - 1729405 - g 71 -7.6 -4.04188 | opp_overlap 1729405 1729404 1729402 ATCGAAATACAAGAA TGCCGCAACGCC GGGG GACGATGTGGCA ATTCTTCTTCCGGGA Atu4580 1729367 - 1730323 + | hypothetical protein TERM 1815 1730394 - 1730417 + T 74 -9.6 -3.64283 | GCTAAAATATCTTAG CTGACTGCCT GTGC GGGTAGTCAG TTATTGCCGCCTTTC Atu4581 1731044 - 1730514 - | hypothetical protein Atu4582 1731424 - 1731089 - | ferredoxin TERM 1816 1731474 - 1731442 - R 78 -13.3 -2.64803 | overlap 1731439 1731438 GGATGCTCAAATGGA GTTGCAGCCGGACGG CGG CTGTCCGGCTGCGCC TGGCCCGGCCAGCCG sodBII 1732128 - 1731529 - | superoxide dismutase Atu4584 1732862 - 1732293 - | TetR family transcriptional regulator TERM 1817 1732772 - 1732749 - G 70 -10.3 -3.48276 | gap 1, opp_overlap 1732748 GGTTGCCGCAGATAA GCCGCAGGCC TTTGC GGC-TGCGGC AAAAGTCAGCCCGTC TERM 1818 1733326 - 1733339 + G 71 -8.1 -4.02302 | opp_overlap 1733322 ATCCCGGAAATCCTC GGCTC AGGC GAGCC TCTTTTTCCTCTCAC Atu4585 1732909 - 1733436 + | hypothetical protein Atu4586 1734589 - 1733522 - | choloylglycine hydrolase family protein TERM 1819 1734722 - 1734732 + H 71 -4.6 -4.56597 | TTCTCAGCTTTTGCG GCCG TTA TGGC TTTTTCCGCAACCCC Atu4587 1734728 - 1735528 + | hypothetical protein Atu4588 1735607 - 1736230 + | sodium bile acid symporter family protein Atu4589 1736276 - 1736557 + | transmembrane transport protein TERM 1820 1736578 - 1736549 - T 73 -5.7 -4.41348 | gap 1, opp_overlap 1736567, overlap 1736551 GGCCCCGGAAACAAA GTCGCCTGA-AGCT CAT AGCTGTCAGGCCGC CTGCAATTCAGGCGG Atu4590 1737652 - 1736606 - | putative oxidoreductase Atu4591 1737812 - 1738717 + | LysR family transcriptional regulator TERM 1821 1738723 - 1738762 + T 100 -20.2 -2.78816 | opp_overlap 1738702 1738718 1738730, overlap 1738730 GGTGAAATGACGCGC CGCAAAACAGGCGCCG GTTAAAGA CGGTGCCTGTTTTGCG TGTCATGACCAGTCG TERM 1822 1738755 - 1738730 - T 74 -7.5 -4.08216 | opp_overlap 1738723 1738730, overlap 1738718 TGACGCGCCGCAAAA CAGGCGCCG GTTAAAGA CGGTGCCTG TTTTGCGTGTCATGA TERM 1823 1738730 - 1738755 + T 86 -9.7 -4.24948 | opp_overlap 1738730 1738718, overlap 1738723 TGACGCGCCGCAAAA CAGGCGCCG GTTAAAGA CGGTGCCTG TTTTGCGTGTCATGA Atu4592 1739610 - 1738816 - | hypothetical protein TERM 1824 1739435 - 1739445 + g 71 -8.2 -4.10657 | overlap 1739417 ATCGCCAGCTTCCAG CCGG CAA CCGG TTTTCCCCAATATCC hpaG 1740473 - 1739625 - | 2-hydroxyhepta-2,4-diene-1, 7-dioate isomerase/5-carboxymethyl-2-oxo-hex-3-ene-1, 7-dioate decarboxylase TERM 1825 1739933 - 1739953 + g 71 -6.7 -4.20696 | opp_overlap 1739925 1739922, overlap 1739926 CCAACCATGGGCCGA GGGGCCCAA ATG TCGGGCCGC TTTTGCCCTTCGTCC TERM 1826 1740415 - 1740434 + g 78 -7 -4.72272 | overlap 1740416 TCGCGGATGTTGCCT TCGGCGTC GAGC GCCGCCGG TTTTTCCTGCCCAAG Atu4594 1741168 - 1740482 - | hypothetical protein Atu4595 1741926 - 1741177 - | dehydrogenase TERM 1827 1741646 - 1741618 - G 70 -10.3 -3.54919 | opp_overlap 1741619 AATGATCCTGCGAAA CTCCTCGATGGGA ATT TCCCACAAAGGAG CGACATTGCCGACAA Atu4596 1742976 - 1741987 - | hypothetical protein Atu4597 1743812 - 1743009 - | ABC transporter, membrane spanning protein TERM 1828 1743827 - 1743849 + H 76 -2.7 -4.99435 | gap 1, opp_overlap 1743827, overlap 1743836 TGTGTCCTCCCGAAA TTGCCCAGCT GTTC AGC-GAGCAA TTTTTCATTATTGGA TERM 1829 1744383 - 1744441 + G 74 -10.9 -3.44527 | opp_overlap 1744398, overlap 1744398 ATATCCGCACGAACT GTC-CGGCGGGATGAAGCAGCGCGCATCC ATT GCGCGCGCGCTGCTGC-TTCAGCCGCGGC TTCTGCTGATGGATG TERM 1830 1744426 - 1744398 - g 74 -12.3 -3.14132 | opp_overlap 1744383 1744398 GTCCGGCGGGATGAA GCAGCGCGCATCC ATT GCGCGCGCGCTGC TGCTTCAGCCGCGGC Atu4598 1743946 - 1744755 + | ABC transporter, nucleotide binding/ATPase protein Atu4599 1744870 - 1745640 + | IclR family transcriptional regulator TERM 1831 1745685 - 1745711 + T 71 -7.9 -4.0098 | opp_overlap 1745685 1745676 1745688, overlap 1745682 1745688 ACGAAAGCTTAATAA GGATCGGGCGG CAATA CCGCCCGATAA TTGTTTGACTTAGGC TERM 1832 1745708 - 1745688 - T 86 -14.7 -2.95161 | opp_overlap 1745685 1745682 1745688, overlap 1745685 1745676 AAAGCTTAATAAGGA TCGGGCGGC AAT ACCGCCCGA TAATTGTTTGACTTA TERM 1833 1745688 - 1745708 + T 91 -14 -3.049 | opp_overlap 1745688 1745685 1745676, overlap 1745685 1745682 AAAGCTTAATAAGGA TCGGGCGG CAATA CCGCCCGA TAATTGTTTGACTTA Atu4600 1747484 - 1745721 - | ABC transporter, nucleotide binding/ATPase protein TERM 1834 1745774 - 1745796 + g 72 -13.4 -2.63723 | opp_overlap 1745773 1745770, overlap 1745773 GCTTGTAGAGACCAT CCGTGGCGAG CAA CTCGCGACGG CTTCCTTGCTCCACA TERM 1835 1746204 - 1746194 - G 74 -5.4 -4.52589 | CCGTTCCAGAGAAAA GGAA GGT TTCC TGGCCGACGTAAGAA TERM 1836 1746637 - 1746647 + g 70 -4.6 -4.56775 | overlap 1746627 GCCATCAGGTCACCC GGTG ATC CGCC TTTTTCAAGCACGGT TERM 1837 1747446 - 1747436 - G 70 -4.6 -4.57341 | AATTTTCTTTAAAAA GCCG CGT CAGC AACTTTTTGTCGTCT TERM 1838 1747483 - 1747473 - G 74 -4 -4.82901 | GTCTGGCGACAAAAA TGAT CCG ATCA CTTAAGCATCCTTGC Atu4601 1748787 - 1747960 - | IS426 transposase Atu4602 1749173 - 1748784 - | IS426 transposase Atu4603 1749248 - 1749556 + | IS3 family transposase Atu4604 1750501 - 1749572 - | IS3 family transposase Atu4605 1750761 - 1750495 - | IS3 family transposase Atu4606 1752671 - 1751061 - | hypothetical protein TERM 1839 1751910 - 1751920 + g 88 -6.8 -4.87786 | opp_overlap 1751910, overlap 1751917 CATAGAGACATCATA GTCG GTG CGAC TTTTTATGAAGTTGG TERM 1840 1752818 - 1752847 + r 72 -12.1 -2.58758 | opp_overlap 1752825 1752828, overlap 1752834 TCCCTACTATTGGCA CGGTAAACGACCG ATCG CGGTCGTCGACCG CTTATGGGAGGTTAT TERM 1841 1752840 - 1752825 - R 74 -10.4 -3.60296 | opp_overlap 1752818 1752834, overlap 1752828 TATTGGCACGGTAAA CGACCG ATCG CGGTCG TCGACCGCTTATGGG TERM 1842 1752834 - 1752848 + r 75 -11.4 -3.31799 | opp_overlap 1752825 1752828, overlap 1752818 GGTAAACGACCGATC GCGGTC GTC GACCGC TTATGGGAGGTTATC nodX 1754100 - 1752982 - | sugar acetylase TERM 1843 1754117 - 1754131 + r 82 -5.6 -5.00616 | ATTTCCGCCGATCAC CGTGGA AAA TCCTCG TTTTTTGCCAAGACC Atu4608 1755953 - 1754100 - | hypothetical protein Atu4609 1756873 - 1755953 - | glycosyltransferase TERM 1844 1756013 - 1755984 - G 81 -5.7 -4.82901 | overlap 1755987 TGTTTGGTATAAAAA TGACCATCGAATC CGCC AATACGATGGGCA GCGTCTCGTGGTGCC TERM 1845 1756838 - 1756854 + g 89 -4.3 -5.28176 | opp_overlap 1756838, overlap 1756841 TTGAACCTGAATCGA CACGCCG CAA TGGCTTG TTTTTTGTAACTGAA TERM 1846 1756841 - 1756851 + g 78 -4.6 -4.73105 | opp_overlap 1756838, overlap 1756838 AACCTGAATCGACAC GCCG CAA TGGC TTGTTTTTTGTAACT Atu4610 1758004 - 1756928 - | sugar nucleotide epimerase/dehydratase tnp 1758584 - 1758309 - | transposase Atu4613 1761184 - 1758821 - | glycosyltransferase TERM 1847 1759426 - 1759415 - G 70 -4.4 -4.52589 | opp_overlap 1759415 TGCTGCCAGAGAAAA GACA ATCG TGTC TTTCGATATTCCCAA TERM 1848 1759442 - 1759452 + g 70 -3.2 -4.60487 | TTTCGATATTCCCAA TTCG GTT CGAG TTTTTGGAAATGGTC TERM 1849 1760139 - 1760149 + g 88 -2.4 -5.52986 | TTATAATATGAAGGG TCGC TTT GCGC TTTTTTTCCTGACGT TERM 1850 1760994 - 1760979 - G 89 -6.8 -5.0538 | gap 1, overlap 1760980 GCCGACTTGAAAAAA CGCG-CG CGT CGACGCG GGCTGAACCACTTGA wbbL 1762220 - 1761339 - | glycosyltransferase TERM 1851 1761770 - 1761752 - G 88 -6.6 -4.96848 | TCTTTGATACAAAAA GCGCTGCG CCG CTCAGCAC CGGAACCACAGCGTC rfbA 1763173 - 1762307 - | glucose-1-phosphate thymidylyltransferase rfbD 1764063 - 1763170 - | dTDP-4-dehydrorhamnose reductase rffB 1765123 - 1764068 - | dTDP-D-glucose-4,6-dehydratase rfbC 1765695 - 1765126 - | dTDP-rhamnose-3,5-epimerase TERM 1852 1765390 - 1765365 - G 73 -9.8 -3.6502 | gap 1 CAGCCGGCACCCAAA GCTGCTCACCG TTTTC CGGTGA-CAGC TCGACCGCGGCCCAC uvrD 1767906 - 1765840 - | ATP-dependent DNA helicase TERM 1853 1766640 - 1766621 - G 73 -10 -3.58343 | gap 1, opp_overlap 1766620 1766621 TGCAGCAGCCGGAAA CCG-GCGAC GCG GTCGCGCGG GTTCTGGGCGAAACG dppF 1768910 - 1768173 - | ABC transporter, nucleotide binding/ATPase protein (dipeptide) TERM 1854 1768843 - 1768857 + g 78 -4.9 -4.81644 | overlap 1768841 ACCGTGAGGCTGACG CCGCG CACGA CGTGG TTTTGGTTTTCTTTC dppD 1769752 - 1768907 - | ABC transporter, nucleotide binding/ATPase protein (dipeptide) TERM 1855 1769206 - 1769225 + g 84 -10 -4.19735 | CGAGAGCCGAGGTCG GCTCGTCG GCGA TGACGAGC TTTGGTTTTGCCAGC TERM 1856 1769543 - 1769565 + g 70 -4.8 -4.56597 | gap 1 CGAGAGGAAATCCAT GCGCT-CGG CGGTTA CCGTGGCGC TTTTTGGCAGAAGCC dppC 1770638 - 1769739 - | ABC transporter, membrane spanning protein (dipeptide) dppB 1771663 - 1770635 - | ABC transporter, membrane spanning protein (dipeptide) TERM 1857 1772281 - 1772270 - g 71 -5.8 -4.34402 | overlap 1772271 1772272 CGGCGCATAGGAAAA TGGC GCGC GCCA TCGACGCCGGCGAAA Atu4624 1771870 - 1772583 + | GntR family transcriptional regulator uxuA 1772650 - 1773630 + | mannonate dehydratase TERM 1858 1773638 - 1773667 + F 100 -15.7 -4.74706 | ATCTCTGACTTTTTG GGTCGGTGGCGCT GCGC AGTGCCGCCGGCC TTTTTCCATCTTGAA TERM 1859 1775026 - 1775047 + G 71 -8.7 -3.83502 | ACCCCGACAATTCGC TTGCCGCCA ACAA TGCCGGCAA TTTCGTCTGGCGCTC Atu4626 1773708 - 1775294 + | ABC transporter, substrate binding protein (oligopeptide) TERM 1860 1775346 - 1775326 - f 81 -12.5 -3.12449 | opp_overlap 1775327, overlap 1775324 1775322 1775320 TCCCATGAATAGAGA GCGGGCGGT TTT ACCGCCCGT TTTTATTTCAGTCTG TERM 1861 1775327 - 1775345 + F 100 -16 -5.31519 | opp_overlap 1775326 1775324 1775322 1775320 CCCATGAATAGAGAG CGGGCGGT TTT ACCGCCCG TTTTTATTTCAGTCT TERM 1862 1775997 - 1776009 + G 79 -9.1 -4.19336 | CTGGAACCGCATCAT CACGC TTG GCGTG TTTGTTGCCCTGCTT Atu4627 1775884 - 1776690 + | hypothetical protein TERM 1863 1776730 - 1776760 + F 70 -3.3 -4.72272 | gap 1, overlap 1776708 GCCGGTTTGCCGAAA GTGTTACAGCTTGG CACG CCGGTCTG-AACAC TTTTTGCTGCGCGAA TERM 1864 1776839 - 1776825 - f 75 -5.7 -4.58085 | AGATTTATAAATAAA GCACT TCCAT AGTGC CACCGTGAGCGGTTC TERM 1865 1777140 - 1777154 + G 80 -3.4 -5.04601 | overlap 1777131 1777130 1777142 TCTTCACGGCTCTTT CAGCCG CTT TGGCCG TTTTTGGTTTCTGGC Atu4628 1776878 - 1779217 + | GGDEF family protein TERM 1866 1779322 - 1779340 + F 78 -12.4 -3.25088 | overlap 1779308 GCGTGTCCATGCTGC CGCTGCCT CTG GGGCAGCG TTGATCAGTTTGACC TERM 1867 1780247 - 1780261 + G 76 -10 -3.77196 | TTATGTGCTGCTCGC CTCGCA GGA TGCGAG TTTCATCAATGGTGA Atu4629 1779420 - 1780313 + | oxidoreductase Atu4630 1780356 - 1780643 + | hypothetical protein TERM 1868 1780678 - 1780703 + G 84 -10.5 -4.1673 | overlap 1780679 AGGGCATCTGTCGTT TGCCGATTTCA ACTG TGAAATCGGCC TTTATTCCGCGCTTA TERM 1869 1780679 - 1780702 + G 76 -14 -3.09556 | overlap 1780678 GGGCATCTGTCGTTT GCCGATTTCA ACTG TGAAATCGGC CTTTATTCCGCGCTT Atu4631 1780640 - 1781473 + | hypothetical protein TERM 1870 1781589 - 1781552 - g 70 -4.1 -4.6526 | overlap 1781542 1781553 ACAAAGGCTGAAAAA CCGGGATCGAGTTTC GTCATCCA GAAACACGATGCCCG CCGCCTGCATTACGA TERM 1871 1782101 - 1782079 - g 74 -5.5 -4.56597 | gap 1 GCCGGTCTCGAAAAA GGCCGG-CGC CTCG ACATCCGGCC AGAAACAGGCGCATG TERM 1872 1782351 - 1782311 - g 73 -5.2 -4.66609 | gap 1, overlap 1782312 1782313 GACTGGACGGAAAAA TTCGGCGCCGCCGTG-GCG GCTG CACTCACGGCGCTGCCGGC GGAAACTGTTCTGAT Atu4632 1781477 - 1783792 + | ATP-dependent DNA ligase pit* 1784330 - 1783743 - | phosphate permease (N-terminal) TERM 1873 1784189 - 1784176 - G 71 -5.9 -4.29929 | overlap 1784177 ATGAAATTGAAGAAA GCCGC CCAG GCGAC CGCATATTGCGGCCG Atu4634 1784974 - 1784330 - | hypothetical protein TERM 1874 1784383 - 1784393 + g 71 -6.8 -4.19238 | overlap 1784386 CCACATCCTCGAAGC GGTC GAC GACC TTTTCGAGTTCGCCG Atu4635 1785088 - 1785627 + | hypothetical protein Atu4636 1788794 - 1785648 - | AcrB/AcrD/AcrF family protein TERM 1875 1785993 - 1786005 + g 70 -3.3 -4.72272 | ATTGGCGAAATCCAC CAGCA ATA TGCCG TTTTTGGTCACGAGG TERM 1876 1786687 - 1786723 + g 91 -5.1 -5.59357 | gap 1, opp_overlap 1786676, overlap 1786677 AGGATGGAGGTCACG TCCTTGGTGCTGGAGG TCACCT CCACCAG-ACCCGGGA TTTTTTTCATGTCCT TERM 1877 1786771 - 1786807 + g 70 -10.8 -3.53012 | gap 1 ATTTTTTCGAGGACT GCCCGGTCGTCGCCGAG GATG CTCAGCTGC-ACCGGGC TTTCGCCGCCACCGA TERM 1878 1787188 - 1787171 - G 74 -4.1 -4.82901 | overlap 1787173 GGCTGCCGATAAAAA TGCCTGC GGTA ACAAGCA GGGTGACGAGCCGGT nolF 1789953 - 1788796 - | nolF secretion protein TERM 1879 1789474 - 1789486 + g 74 -5.5 -4.56597 | CTTGTCTAGCTGTTC CGTCG AAG CGATG TTTTTCGCAGCCAGC Atu4638 1790133 - 1790807 + | two component response regulator Atu4639 1790804 - 1792138 + | two component sensor kinase TERM 1880 1792455 - 1792494 + G 78 -2.6 -5.08255 | opp_overlap 1792470, overlap 1792457 CGTTGACGCCTACGG GCTGGCCGGCATCAAGAC CGTC GCCATAGTGCCGACCACC TTTTCTTTTGCGGCT Atu4640 1792174 - 1793121 + | hypothetical protein oxyR 1794091 - 1793183 - | LysR family transcriptional regulator katA 1794300 - 1796471 + | catalase TERM 1881 1796528 - 1796493 - T 100 -14.8 -4.15565 | opp_overlap 1796498, overlap 1796498 GCGATTAGCCGAAAA GACAACACCTCCCCGA GCGA TCGGGGAGGTGTTTTT GTGGCGGCTTCCTCT TERM 1882 1796498 - 1796523 + T 100 -19.1 -4.84017 | opp_overlap 1796493 1796498 TAGCCGAAAAGACAA CACCTCCCCGA GCGA TCGGGGAGGTG TTTTTGTGGCGGCTT TERM 1883 1796523 - 1796498 - T 100 -19.1 -3.96506 | opp_overlap 1796498, overlap 1796493 TAGCCGAAAAGACAA CACCTCCCCGA GCGA TCGGGGAGGTG TTTTTGTGGCGGCTT Atu4643 1796744 - 1796568 - | hypothetical protein Atu4644 1797736 - 1796867 - | AraC family transcriptional regulator TERM 1884 1798808 - 1798783 - g 79 -8.1 -4.56775 | overlap 1798784 1798785 AGCTTTCGCGAAAAA GGCCGCCAGCC TGAC GGCGGGCGATC CGCGCGAGGGCAAGA vdh 1797860 - 1799311 + | vanillin: NAD oxidoreductase Atu4646 1800234 - 1799338 - | LysR family transcriptional regulator TERM 1885 1800280 - 1800264 - H 70 -2.9 -4.7078 | overlap 1800266 TCAACCATCGAAAAA TACCCGC TTC ACAGGCA AAAACAATGTGGTGT TERM 1886 1800581 - 1800568 - g 77 -3.7 -4.88407 | opp_overlap 1800568, overlap 1800561 TCAGGCAATGAAAAA CGGCG AGAT CGACG TTTTCCTCGGCAACT Atu4647 1800329 - 1801282 + | hypothetical protein TERM 1887 1801329 - 1801347 + G 83 -4.4 -5.03715 | overlap 1801329 CCTGATCCTGATGGC CGACCAGT TCA ACGGGACG TTTTTTCCCGATGGT TERM 1888 1801430 - 1801396 - g 93 -16.5 -3.63627 | GCGCCACATCTGAAA GCATTGGCGGAGCGG TCTGT CCGCTTCGCCAATAC CTATACGGCAAGCCC betC 1801297 - 1802808 + | choline sulfatase Atu4649 1803717 - 1802824 - | carbohydrate kinase TERM 1889 1803677 - 1803698 + g 88 -2.2 -5.5208 | overlap 1803685 AGGTCGCAATAGATC CGGCCG ATGCTGATGA CGGCTG TTTTTTCTGTTGTCA Atu4650 1804754 - 1803714 - | ABC transporter, nucleotide binding/ATPase protein (sugar) argH 1806124 - 1804754 - | argininosuccinate lyase TERM 1890 1804936 - 1804961 + g 72 -2.5 -4.72497 | gap 1, overlap 1804938 GCACCGCGACGAAGT GCTCCGGCGAGA CGA TCT-GCCTGAAC TTTTCTTCGTCAATG Atu4652 1807115 - 1806273 - | ABC transporter, membrane spanning protein (sugar) Atu4653 1808053 - 1807112 - | ABC transporter, membrane spanning protein (sugar) TERM 1891 1808010 - 1807991 - G 71 -6.4 -4.18018 | gap 1 CGTGCGCATGGAAAA GCGATCTCC GAG GGAG-CCGC CGGGGCGGCCGGATG TERM 1892 1808012 - 1808032 + g 78 -15.4 -2.53345 | overlap 1808011 1808010 TCCGAGGGAGCCGCC GGGGCGGC CGGAT GCCGCCCC CTGTTGATCTATCGC Atu4654 1809336 - 1808071 - | ABC transporter, substrate binding protein (sugar) TERM 1893 1810028 - 1810014 - g 74 -5.6 -4.56597 | overlap 1810015 CGCGGTTGCGAAAAA TGTCGG ATG CCGACT GCTCGGCACCGGCGT xylR 1809583 - 1810809 + | ROK family transcriptional regulator TERM 1894 1811070 - 1811112 + G 73 -14.1 -2.80816 | gap 1, opp_overlap 1811044 CGGAGCGGCTCGGCG CGCTCGGCGTCATCC-GCTC GCGG GAGCTGGAGGAGGCCGCGCG TGTCATCGATGCCGA TERM 1895 1812095 - 1812109 + G 75 -7.8 -4.27316 | overlap 1812091 TCGGTTCAGTCGCGT GGCCAG ACG CTGGTC TTTTCGCTTGCGGCC TERM 1896 1812879 - 1812867 - g 70 -10.5 -3.50447 | GGAACCCGGAGACAA CGCCG GTT CGGCG TCTCGAAATCGGCAA TERM 1897 1812896 - 1812941 + G 71 -6.8 -4.17762 | gap 1 CTCGAAATCGGCAAG CCGTCA-CTGCGCTGGCGAGT GACGG ACCCGAAAGCGGAGGTGACGG TTCTTTTGCCCGATC Atu4656 1810829 - 1813231 + | hypothetical protein TERM 1898 1813289 - 1813263 - g 84 -9.4 -4.53036 | opp_overlap 1813261 1813285, overlap 1813255 TGAGAAACAGGAAAA CCCGCGCG AAACGGATACA CGCGCGGG CGTTGGCTGGCTGTT Atu4657 1813228 - 1814139 + | hypothetical protein Atu4658 1814682 - 1814149 - | hypothetical protein TERM 1899 1814640 - 1814630 - G 70 -4.6 -4.56775 | ATCGGTCTCCAAAAA CGGC GTA ACCG TTCATCCTTAATCGC agpT 1815574 - 1814687 - | AraC family transcriptional regulator TERM 1900 1814951 - 1814928 - G 76 -5.8 -4.59511 | overlap 1814929 AAGATGCGGGAAAAA TGCGCCCGGC TGAG GCCGGCCACC GCCGCAAGGTCGCTC melA 1815772 - 1817238 + | alpha-galactosidase TERM 1901 1817288 - 1817256 - f 100 -12.7 -5.25656 | gap 1 AAAAGCATGAAAAAA GGCCGG-CGGCGGA AGGGAG TTCGCCGTCCGGCC ATAACGATCACAGAG agpA 1817343 - 1819430 + | ABC transporter, substrate binding protein (alpha-galactoside) Atu4662 1819574 - 1820581 + | ABC transporter, membrane spanning protein (oligopeptide ) Atu4663 1820583 - 1821719 + | ABC transporter, membrane spanning protein (oligopeptide) TERM 1902 1823076 - 1823133 + G 93 -11.1 -4.40132 | gap 1 TTTCCCGCACGAATT TTCCGGCGGCCAGCGCCAGCGCATCGCC ATT GCCCGCGCCGTGGCGCTGGA-GCCGGAA TTTATTCTGCTTGAT Atu4664 1821733 - 1823400 + | ABC transporter, nucleotide binding/ATPase protein (oligopeptide) melA 1823423 - 1824796 + | alpha-galactosidase TERM 1903 1824822 - 1824844 + F 91 -14.8 -3.14132 | opp_overlap 1824819, overlap 1824834 1824835 TCACGGCAAGTACGA GGCCGCGGGT TCA GCCTGCGGCC TTGATGCCACAGGGG TERM 1904 1824834 - 1824867 + F 85 -2.2 -5.53288 | opp_overlap 1824819, overlap 1824822 1824835 CGAGGCCGCGGGTTC AGCCTGCGGCCTTG ATGCCA CAGGGGCCCGGGCA TTTTTTTGCCTTCGC Atu4666 1825088 - 1826152 + | HlyD family secretion protein TERM 1905 1826215 - 1826196 - g 81 -4.2 -4.89233 | gap 1, overlap 1826200 GACGAATACTAAAAA CGATCCCGG CGC CCCGG-TCG CACGGTTGACGGATG TERM 1906 1827091 - 1827077 - g 71 -7.8 -4.11394 | opp_overlap 1827077 ATGTCAGCTTCAAAA TCCCGC GCG GCGAGA TTTTCGGCTTTCTCG TERM 1907 1827339 - 1827363 + G 80 -11.3 -3.83026 | AGCGACCATTCAGCC GCGCATCGCCG AGA TGGCGGAGCGC TTTGATCTCGGCACC TERM 1908 1827767 - 1827738 - g 74 -5.5 -4.56597 | opp_overlap 1827760, overlap 1827740 CTCGGGTGTCAAAAA GGCGGAGCCTGCA ATAG CGCCCGCTCCGGC AACGGAGGTGGTTCC TERM 1909 1828442 - 1828432 - g 76 -6.8 -4.56597 | GTCGTCCGGGAAAAA GAGC TTG GCTC CATCGTCAACCTCTA Atu4667 1826164 - 1828941 + | ABC transporter, nucleotide binding/ATPase protein Atu4668 1828938 - 1830056 + | ABC transporter, membrane spanning protein TERM 1910 1830611 - 1830637 + G 76 -7.2 -4.52589 | opp_overlap 1830613, overlap 1830613 CGCGAGCAGGAAATC AAGGATGATGGC AAT GCCAACGTCCTG TTTTATCTGGGGCCG TERM 1911 1830613 - 1830635 + G 78 -9.8 -3.87627 | opp_overlap 1830613, overlap 1830611 CGAGCAGGAAATCAA GGATGATGGC AAT GCCAACGTCC TGTTTTATCTGGGGC Atu4669 1830326 - 1830793 + | hypothetical protein Atu4670 1831294 - 1831052 - | hypothetical protein TERM 1912 1831192 - 1831208 + g 100 -15.1 -5.61881 | opp_overlap 1831186 1831184 TTATAAATACTTCAA CGCCCGC TTC GCGGGCG TTTTTGTTTTTGGAG TERM 1913 1831599 - 1831572 - R 86 -12 -3.86346 | opp_overlap 1831572 TCATCTTTTCAGAAA GCCTGCCGCA CCTCCTCC CGCGGCAGGC TTTTTTGTTTTGGGG TERM 1914 1831572 - 1831599 + r 100 -11.3 -5.79595 | opp_overlap 1831572 TCATCTTTTCAGAAA GCCTGCCGC ACCTCCTCCC GCGGCAGGC TTTTTTGTTTTGGGG Atu4671 1832085 - 1831642 - | response regulator ftsZ1 1832465 - 1833427 + | cell division protein FtsZ TERM 1915 1833492 - 1833519 + F 74 -7.6 -4.18488 | opp_overlap 1833479 1833503 1833506 CATTCTTCTCCCGCC GGGGAGCAGAAC AAGA GGCCTGCTCCTC TTTCTTGGGATAAAT TERM 1916 1833576 - 1833602 + F 100 -12.9 -5.03201 | opp_overlap 1833576 ACCGAACGATTAAAA GCCGCCGCGGG TAATT TCCGCGACGGC TTTTTGGTTGTTCTT TERM 1917 1833602 - 1833576 - f 100 -14.4 -4.35742 | opp_overlap 1833576 ACCGAACGATTAAAA GCCGCCGCGG GTAATTT CCGCGACGGC TTTTTGGTTGTTCTT TERM 1918 1834213 - 1834227 + G 89 -11.4 -4.17958 | TTCTGGACGAGGGGC GCCGCA TTC TGCGGC TTTATTACCAGTCTT Atu4674 1833717 - 1834415 + | GntR family transcriptional regulator TERM 1919 1834635 - 1834654 + G 71 -7.1 -4.20918 | overlap 1834638 1834646 CAAGGAACTGATCGC CGACGGC ATGTCC GCCGTTG TTTATTGCGGTTCGA TERM 1920 1834837 - 1834856 + G 72 -12.1 -3.09516 | GGCCTGATGGTTATT CCGCGCG TTCTGT CGCGCGG TTCGGTCATCGCCGC dapA 1834525 - 1835490 + | dihydrodipicolinate synthase TERM 1921 1835536 - 1835509 - T 100 -14.2 -4.45485 | opp_overlap 1835514, overlap 1835514 ATCACAGTGATAAAA TAAAAGGCCCGC ATTT GCGGGCCTTTTT CATTTCCGATCCTCA TERM 1922 1835531 - 1835514 - T 100 -14.1 -5.19275 | opp_overlap 1835514, overlap 1835509 AGTGATAAAATAAAA GGCCCGC ATTT GCGGGCC TTTTTCATTTCCGAT TERM 1923 1835514 - 1835531 + T 100 -14.1 -4.99134 | opp_overlap 1835514 1835509 AGTGATAAAATAAAA GGCCCGC ATTT GCGGGCC TTTTTCATTTCCGAT Atu4676 1836595 - 1835558 - | putative malate dehydrogenase TERM 1924 1836743 - 1836756 + G 85 -5.9 -5.15969 | CTATAGGCCGCGACA CCGTG CTTA CGCGG TTTTTTCCATTCAGG Atu4677 1836657 - 1836917 + | hypothetical protein Atu4678 1836914 - 1837720 + | ABC transporter, substrate binding protein (amino acid) TERM 1925 1837732 - 1837770 + F 100 -14.7 -3.85698 | gap 1, opp_overlap 1837738, overlap 1837738 CTGATCAGGACTTTT CG-TAAACGGCGCGGTCA AAAA TGATCGCGCCGTTGATCG TTTCTGAAAAGGCGG TERM 1926 1837738 - 1837763 + F 100 -16.9 -3.35467 | opp_overlap 1837738, overlap 1837732 AGGACTTTTCGTAAA CGGCGCGGTCA AAAA TGATCGCGCCG TTGATCGTTTCTGAA TERM 1927 1837763 - 1837738 - f 95 -14.7 -3.5393 | opp_overlap 1837738 1837732 AGGACTTTTCGTAAA CGGCGCGGTCA AAAA TGATCGCGCCG TTGATCGTTTCTGAA Atu4679 1837793 - 1838458 + | ABC transporter, membrane spanning protein (amino acid) Atu4680 1838471 - 1839124 + | ABC transporter, membrane spanning protein (amino acid) Atu4681 1839117 - 1839839 + | ABC transporter, nucleotide binding/ATPase protein (amino acid) TERM 1928 1840654 - 1840638 - g 88 -7.3 -5.00616 | CGCTTGGCGAAAAAA TTCCGCT GGA AACGGAA CGGGGTTATAATACT dadA 1839839 - 1841080 + | D-amino acid dehydrogenase, small subunit TERM 1929 1841076 - 1841120 + F 100 -8.7 -5.41746 | opp_overlap 1841085, overlap 1841077 TTTCGCCGCAACGTT TCTAGAGAATTCTGGCTTTTC TCC GAAACGCAAAAATTCTCTAGC TTTTTTTCACGCATT TERM 1930 1841077 - 1841119 + F 86 -12.2 -3.83963 | opp_overlap 1841085, overlap 1841076 TTCGCCGCAACGTTT CTAGAGAATTCTGGCTTTTC TCC GAAACGCAAAAATTCTCTAG CTTTTTTTCACGCAT TERM 1931 1841863 - 1841845 - g 81 -4.4 -5.00616 | opp_overlap 1841856, overlap 1841847 CCTTTGCGGAAAAAA TGGCCGAC ATG GGCGGCAA GGTGCGGGCTCCTTC TERM 1932 1842232 - 1842191 - g 73 -4.9 -4.70169 | gap 1, opp_overlap 1842223, overlap 1842192 1842193 GTATATCGAAGAAAA CCGGC-GGCCGCAGCGCATC GTT GACGTGGCCCTGCCAGCCGG CATTGATGACGCCTT Atu4683 1841190 - 1842899 + | hypothetical protein TERM 1933 1843289 - 1843324 + G 79 -9.6 -4.25283 | gap 1 GCGGGCTGGTGAAGG TGCGCGCGGAAT-GCCG TAA CGGCAAGGCCGAGCGCA TTTTCGTGCAGAACT TERM 1934 1843518 - 1843571 + G 77 -3.9 -4.93968 | gap 2, opp_overlap 1843518, overlap 1843514 CGTGCGCATCACCAA TGCCGCCAA-CAAGGCTTT-GGGTT TCGACC ATCCCGAAAACCCGGATTGGCGGCA TTTTTCCTTCTGCCT Atu4684 1842910 - 1843938 + | hypothetical protein Atu4685 1845072 - 1844086 - | LacI family transcription regulator TERM 1935 1845257 - 1845225 - R 90 -12.7 -3.80189 | AGATATCAAGGGAAA GCACGCCGCATGATT GCG ATTGACGCGGCGTGC ACCGGATTTATGCGA Atu4686 1845585 - 1845265 - | hypothetical protein Atu4687 1845881 - 1846684 + | ABC transporter, substrate binding protein (amino acid) TERM 1936 1846728 - 1846698 - f 84 -13.3 -3.08133 | gap 1, overlap 1846717 1846718 GATTGAGCCATTCAA CGCGCCCGCCGG GAGAAAAT CCGGCGGGC-CG GGAAATGTCCACGGA Atu4688 1846751 - 1847455 + | ABC transporter, membrane spanning protein (amino acid) TERM 1937 1847542 - 1847559 + G 78 -4.7 -4.72986 | overlap 1847544 ATCATTGCGCTTGTC GGCGGCG GCAT CGTCGGC TTTTTCATCGCACTC TERM 1938 1847890 - 1847900 + G 71 -6.8 -4.19506 | CGCATTTCCCTGCCG CCGA CCG TCGG TTTTGCCGTTCAGGT Atu4689 1847452 - 1848111 + | ABC transporter, membrane spanning protein (amino acid) TERM 1939 1848298 - 1848341 + G 80 -14.6 -3.02511 | gap 1, opp_overlap 1848276, overlap 1848301 CCATGCGCTGGGCGG AGATGCC-ACGGCGCTGCGCA AGC TGCGCACCGACGTCGGCATCG TGTTCCAGAGCTACA TERM 1940 1848301 - 1848338 + G 77 -14.9 -2.73994 | gap 1, overlap 1848298 TGCGCTGGGCGGAGA TGCC-ACGGCGCTGCGCA AGC TGCGCACCGACGTCGGCA TCGTGTTCCAGAGCT Atu4690 1848155 - 1848823 + | ABC transporter, nucleotide binding/ATPase protein (amino acid) Atu4691 1848847 - 1849782 + | 2-hydroxyacid dehydrogenase TERM 1941 1849812 - 1849833 + F 100 -14.4 -4.68645 | ATACCTGCAATCTTT CGGCGCGG CTTTGT CCGCGCCG TTTTGATTTTGGCTG TERM 1942 1851627 - 1851606 - g 78 -6.5 -4.62904 | gap 1, opp_overlap 1851606 1851614, overlap 1851597 1851607 AAACATCCTCAAAAA GGCCTGCCGC CAG GCG-CAGGCA TGGGTTGCCGCCGGC Atu4692 1850008 - 1852182 + | GGDEF family protein Atu4693 1852650 - 1853717 + | outer membrane protein TERM 1943 1853805 - 1853821 + T 76 -10.9 -3.72576 | opp_overlap 1853803 GCTCCAGTCAAAGTT CCTGACA TGA TGTCAGG TTTGCTCCCCGGACC TERM 1944 1853826 - 1853852 + T 100 -11.6 -4.93296 | gap 1 ATGATGTCAGGTTTG CTCCCCGGACC ACTCCA GG-CCGGGGAG TTTTTGTCGTGATGC Atu4694 1855426 - 1853909 - | chlorohydrolase TERM 1945 1854830 - 1854811 - G 75 -7.8 -4.25848 | opp_overlap 1854810, overlap 1854799 AAGGCGTCAGGAAAA CGCTGATG CGGC CATCGGCG CTTCCATGCAATGTC TERM 1946 1855636 - 1855688 + G 76 -10.3 -3.76224 | overlap 1855638 CATGGCTGCCGCCGC CATTGCCGTTCCCGCCCATGCGGAG ACG CTCCGCTGGGGCGGCCGCGCCGATC TTTACTCGCTAGACC TERM 1947 1855638 - 1855686 + G 79 -12.9 -3.46647 | overlap 1855636 TGGCTGCCGCCGCCA TTGCCGTTCCCGCCCATGCGGAG ACG CTCCGCTGGGGCGGCCGCGCCGA TCTTTACTCGCTAGA TERM 1948 1856261 - 1856233 - g 88 -6.7 -4.91109 | GTGGGATCAGAAAAA GCACAATCTCGAC CGC ATCGAATTCGTGC CGATTGCATCTGCGG TERM 1949 1856999 - 1856989 - g 77 -8.2 -4.29304 | GCAGGACAATACAAA GCGC CTG GCGC TCGAAGAGGCAGCGC Atu4695 1855589 - 1857154 + | ABC transporter, substrate binding protein (oligopeptide) TERM 1950 1857164 - 1857202 + F 95 -12.5 -4.07885 | gap 1, opp_overlap 1857171, overlap 1857167 1857171 AAATAAGACGGATTG CAAGTGAGGCGC-CGGTC ATTC GACCGAGCGCCTTGGTTG TTTTCAGCAGGCATC TERM 1951 1857167 - 1857199 + F 77 -8.4 -4.17048 | gap 1, opp_overlap 1857171, overlap 1857164 1857171 TAAGACGGATTGCAA GTGAGGCGC-CGGTC ATTC GACCGAGCGCCTTGG TTGTTTTCAGCAGGC TERM 1952 1857171 - 1857195 + F 89 -13.6 -3.68798 | gap 1, opp_overlap 1857171, overlap 1857167 1857164 ACGGATTGCAAGTGA GGCGC-CGGTC ATTC GACCGAGCGCC TTGGTTGTTTTCAGC TERM 1953 1857195 - 1857171 - f 78 -13.6 -2.53995 | gap 1, opp_overlap 1857171 1857167 1857164 ACGGATTGCAAGTGA GGCGC-CGGTC ATTC GACCGAGCGCC TTGGTTGTTTTCAGC TERM 1954 1857846 - 1857860 + G 71 -9.2 -3.72695 | TTTTCCGTTTCCCTC GGCTGG GCG CCGGCC TTTGGTCGCGGCGAT Atu4696 1857372 - 1858340 + | ABC transporter, membrane spanning protein (oligopeptide) TERM 1955 1858595 - 1858607 + G 76 -6.2 -4.64861 | overlap 1858565 GATCTGGCAGGAGGG CGGC GAATG GCCG TTTCTTTTGGGAACG Atu4697 1858359 - 1859306 + | ABC transporter, membrane spanning protein (oligopeptide) Atu4698 1859312 - 1860505 + | cytosine deaminase TERM 1956 1861594 - 1861627 + G 79 -8.8 -4.18018 | gap 1, opp_overlap 1861593 1861596, overlap 1861596 ACCTGTCGCATCAAT GA-CGGCGCTCCGGA CCAGA TCCGCTGCGCCGATC TTTTCGATGCGGCGA TERM 1957 1861766 - 1861807 + G 75 -2.1 -4.88736 | gap 1 GCGTCGATCCGATCA CGACGCTGGTGACCGGTGGC TCG GGCAA-GGTCACGAGAGCCG TTTTTGTCGATGGTC trzA 1860505 - 1861998 + | N-ethylammeline chlorohydrolase Atu4700 1862000 - 1862974 + | ABC transporter, nucleotide binding/ATPase protein (oligopeptide) TERM 1958 1863194 - 1863208 + G 76 -9.2 -4.07568 | AATCGACCGTTGCCC GCCTGG TGA CCGGGC TTTTCCGGCCAAGCG Atu4701 1862971 - 1863993 + | ABC transporter, nucleotide binding/ATPase protein (oligopeptide) Atu4702 1864679 - 1864002 - | GntR family transcriptional regulator TERM 1959 1864334 - 1864359 + g 70 -3.1 -4.63184 | TGGTATTGGCCACAC GCTCCTTGGCC ACAT GGTCGCGCAGC TTTTTGAGATCGGTT Atu4703 1864809 - 1865438 + | hypothetical protein huy 1865460 - 1866182 + | hydantoin racemase TERM 1960 1867197 - 1867169 - g 84 -9.7 -4.57569 | overlap 1867170 CGAGCGGCGGAAAAA GCATTTGATAGGA ATT TCCTATCAAACGA CGGAAACTGATTATT TERM 1961 1867196 - 1867170 - g 81 -13.2 -3.3422 | overlap 1867169 GAGCGGCGGAAAAAG CATTTGATAGGA ATT TCCTATCAAACG ACGGAAACTGATTAT Atu4705 1866284 - 1867207 + | LysR family transcriptional regulator TERM 1962 1867667 - 1867690 + G 73 -4.5 -4.60797 | overlap 1867668 ACGAGACTGCTGCCG ACGGTTCCG TCACGC TGGAACCGG TTTTCTGTCTCGGGC nuoE 1867324 - 1867803 + | formate dehydrogenase subunit gamma TERM 1963 1867798 - 1867812 + F 80 -4.2 -5.06414 | CTGACGGAGGCGCGT CGATGA GTG TCACCG TTTTTATTCCCGGCG TERM 1964 1868025 - 1868035 + G 70 -3.2 -4.64676 | GATGTCACGTCACTT TTCG ATG CGGA TTTTCTTGACGGTGG nuoF 1867800 - 1869356 + | NADH ubiquinone oxidoreductase chain F TERM 1965 1871887 - 1871859 - g 77 -10.9 -3.65812 | CCTGTCGCAATATAA TGTCGGCGCGCAG ACA CGGCGCACCGAAA ACGTCGTCTGGCACG fdhF 1869361 - 1872243 + | formate dehydrogenase alpha subunit TERM 1966 1872249 - 1872267 + F 85 -13.1 -3.54029 | opp_overlap 1872244 1872245 TGCGGAATAATCGGG GGCCGGG CCAGT CCCGGCC TTCTCATTCATGGAG fdsD 1872318 - 1872662 + | NAD-dependent formate dehydrogenase delta subunit TERM 1967 1873121 - 1873137 + G 70 -10.8 -3.52204 | overlap 1873117 GGCTGGAACGGGTAG GCCCGC GCAAG GCGGGC TTCGTTTCCGCCTGC Atu4710 1872778 - 1874430 + | MFS permease TERM 1968 1874452 - 1874476 + T 100 -17.2 -4.41616 | ACGCCTTCGACATTC TCCGGGCAGC CTTGC GCTGCCCGGA TTTGTTTCAGGCGCT Atu4711 1875891 - 1874533 - | two component sensor kinase Atu4712 1876550 - 1875888 - | two component response regulator Atu4713 1876684 - 1877253 + | hypothetical protein TERM 1969 1877307 - 1877283 - T 100 -22.9 -4.74504 | opp_overlap 1877283 ATTGCAATTGAAAAA GCGCGCCGCGA TCA TCGCGGCGCGC TTGCTGTTACGTTGC TERM 1970 1877283 - 1877307 + T 100 -22.9 -3.39529 | opp_overlap 1877283 ATTGCAATTGAAAAA GCGCGCCGCGA TCA TCGCGGCGCGC TTGCTGTTACGTTGC Atu4714 1877863 - 1877357 - | hypothetical protein Atu8199 1878207 - 1877860 - | hypothetical protein Atu8096 1878394 - 1878215 - | hypothetical protein Atu4716 1880012 - 1878534 - | LuxR family transcriptional regulator TERM 1971 1878597 - 1878581 - G 76 -15.1 -2.62184 | opp_overlap 1878591 CCCGCGCCCAGATCA CCGCCGC GGT GCGGCGG TTGACGCCGATCTTG TERM 1972 1879584 - 1879607 + g 75 -13.9 -2.94218 | opp_overlap 1879573 1879572 AAAGGCGCTCTCGAA CCGCGCTTC CGCCTC GAAGCGCGG TGTCTCGTCGCGAAT Atu4718 1880247 - 1881032 + | GntR family transcriptional regulator TERM 1973 1881966 - 1881978 + G 79 -9.1 -4.19177 | opp_overlap 1881961 1881965 1881964 TCGGCAAGGACAAGC GCCTG CGC CAGGC TTTCTCTTACGCGAT TERM 1974 1882483 - 1882472 - g 72 -2.2 -4.8622 | overlap 1882475 1882477 GTCCGCAAGGAAAAA TACG ATGC CGCA AGCGTCATCCTCAAC dppA 1881113 - 1882621 + | ABC transporter, substrate binding protein (dipeptide) dppB 1882689 - 1883636 + | ABC transporter, membrane spanning protein (dipeptide) TERM 1975 1883692 - 1883667 - f 81 -8.3 -4.25104 | gap 1 CGTTCTCGATCAAAA CCTATCCGTACC GGC GGCACGG-CAGG AAAGCCGCGCCTGGA dppC 1883713 - 1884519 + | ABC transporter, membrane spanning protein (dipeptide) TERM 1976 1884666 - 1884643 - g 76 -5.8 -4.58395 | GCGATCCTCGAAAAA GGCGGCAATG CTTT CGACGCCGCC GTCGCCACCGGTTTC TERM 1977 1884714 - 1884738 + G 70 -4.1 -4.63218 | overlap 1884716 GCCGCATCTCTGCGG CCCGGGCGG GGACATG CCGGCCGTG TTTTATTCAAAGCAG TERM 1978 1885756 - 1885740 - g 75 -7.9 -4.1899 | GCATCTGACGGAAAA GCGCGGT GAC ACCGTGC ATATCGATGTCATCG ggt 1884541 - 1886325 + | gamma-glutamyltranspeptidase TERM 1979 1887654 - 1887622 - g 74 -7 -4.42639 | gap 1, overlap 1887625 1887647 ACAGGCGAAGGAAAA GAC-GGCCGATCTTC TGGA GAAGGTAGGCCTGTC GGCCGATATGGCCAA TERM 1980 1888071 - 1888059 - g 71 -6.9 -4.15833 | overlap 1888048 ATGACGAGCTGAAAA GCCCG ATA CGGAC AATGAGTTATGAAGC Atu4723 1886330 - 1888141 + | ABC transporter, nucleotide binding/ATPase protein TERM 1981 1888186 - 1888205 + T 85 -9.2 -4.52589 | opp_overlap 1888188, overlap 1888188 TTGGCACAATACAAA AACCCCGC CGAA GCGGGGTC TTTTCTCTACCAGCC TERM 1982 1888188 - 1888203 + T 86 -11.8 -3.87627 | opp_overlap 1888188, overlap 1888186 GGCACAATACAAAAA CCCCGC CGAA GCGGGG TCTTTTCTCTACCAG TERM 1983 1888203 - 1888188 - T 100 -11.8 -5.1523 | opp_overlap 1888188 1888186 GGCACAATACAAAAA CCCCGC CGAA GCGGGG TCTTTTCTCTACCAG Atu4724 1888415 - 1888212 - | hypothetical protein Atu8200 1888598 - 1888918 + | hypothetical protein TERM 1984 1888922 - 1888952 + F 93 -13.3 -3.90318 | overlap 1888926 TATCGCTACTGATGG GCAAGGCCCTCTC CAATC GGGAGGGCCTTTC TTTATGCGCTGGTCA TERM 1985 1888926 - 1888948 + F 100 -12.7 -4.56367 | overlap 1888922 GCTACTGATGGGCAA GGCCCTCTC CAATC GGGAGGGCC TTTCTTTATGCGCTG sodBIII 1889112 - 1889807 + | superoxide dismutase TERM 1986 1889856 - 1889828 - f 74 -7.4 -4.07568 | gap 2, opp_overlap 1889843 1889853, overlap 1889829 TTCTGCTGCGTAAAA CCTGCCGGGATCGC CCG GC-A-CCCGGCGGG TTGCCCTGATTTGCA Atu4727 1889922 - 1890911 + | hypothetical protein TERM 1987 1891019 - 1890993 - f 100 -18 -3.04461 | opp_overlap 1890993 TATTGACCTCGAAGA TCGTGGCCGCAC TCG GAGCGGCCACGA TTGTGACGACCGGTC TERM 1988 1890993 - 1891019 + F 100 -18 -3.28924 | opp_overlap 1890993 TATTGACCTCGAAGA TCGTGGCCGCAC TCG GAGCGGCCACGA TTGTGACGACCGGTC TERM 1989 1891092 - 1891080 - f 73 -5.5 -4.60255 | opp_overlap 1891069, overlap 1891069 ACAAGGTTGCAAAAA CCTGC TTG GCAAG CTCGAGCGGCTCAGC TERM 1990 1891398 - 1891424 + G 70 -3.7 -4.65263 | gap 1, opp_overlap 1891385 AAGCTCGATTTCCGC GCCGATGCCTAT CGCC ATGTGC-TCGGC TTTGTTTTCAACCAT exsA 1891371 - 1893173 + | ABC transporter, nucleotide binding/ATPase protein TERM 1991 1893209 - 1893180 - f 100 -12.9 -5.40072 | gap 1, opp_overlap 1893184 1893185 GTGGCCTGAAAAAAA GAAATGCCGGG-GG CAT CCTCCCGGCGTTTC CTTCGGAACATTGAA TERM 1992 1893184 - 1893205 + F 82 -11.5 -3.90291 | opp_overlap 1893180, overlap 1893185 CCTGAAAAAAAGAAA TGCCGGGGG CATC CTCCCGGCG TTTCCTTCGGAACAT TERM 1993 1893185 - 1893204 + F 79 -12.8 -2.93853 | opp_overlap 1893180, overlap 1893184 CTGAAAAAAAGAAAT GCCGGGGG CATC CTCCCGGC GTTTCCTTCGGAACA Atu4729 1893354 - 1894955 + | ABC transporter, nucleotide binding/ATPase protein Atu4730 1895899 - 1894949 - | hypothetical protein Atu4731 1898334 - 1895896 - | fimbrial usher protein Atu4732 1899022 - 1898306 - | fimbrial chaperone TERM 1994 1898708 - 1898721 + gr 83 -9.5 -4.07568 | overlap 1898701 GCGGTAACTCTCCTC CGCCC TGAC GGGCG TTTTGGAAAGCCGGA TERM 1995 1899030 - 1899016 - GR 72 -2.1 -4.74103 | gap 1 CCGCTAAGGTAAAAA GA-CGC ATGC GCGATC CTCCCTATGGCGATC Atu4733 1899541 - 1899044 - | hypothetical protein TERM 1996 1899738 - 1899750 + H 77 -4.7 -4.89852 | opp_overlap 1899738, overlap 1899739 GTCTTCTCGGCAAGA CCCGG TAA CCGGC TTTTTATCGGTCTAC TERM 1997 1899844 - 1899867 + H 75 -11 -3.41569 | opp_overlap 1899835, overlap 1899847 GAAACCCGGGGCTAT CGATGCCACC GTCC GGTGGCGTTG TGTTTGGCTCCATAG TERM 1998 1899847 - 1899864 + H 73 -9.1 -3.84185 | opp_overlap 1899835, overlap 1899844 ACCCGGGGCTATCGA TGCCACC GTCC GGTGGCG TTGTGTTTGGCTCCA TERM 1999 1901367 - 1901350 - g 72 -2.6 -4.82901 | CGTTTGGGACAAAAA GGCGCA GGCCAA CACGCC GAAGCTCATGTCCTT acnB 1899905 - 1902694 + | bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase TERM 2000 1902784 - 1902759 - f 100 -17.7 -3.43785 | opp_overlap 1902759 1902783 CATCAGATGAATGAA CGCAGCGGAAA TCGA TTTCCGCTGCG TTTTCATTTGTATGG TERM 2001 1902759 - 1902784 + F 100 -17.7 -4.65153 | opp_overlap 1902759, overlap 1902783 CATCAGATGAATGAA CGCAGCGGAAA TCGA TTTCCGCTGCG TTTTCATTTGTATGG Atu4736 1903103 - 1905046 + | methyl-accepting chemotaxis protein TERM 2002 1905102 - 1905143 + F 100 -17.5 -4.62783 | gap 1, opp_overlap 1905105 1905109, overlap 1905103 1905106 1905109 AGGGCATCGTTTCAG ACATGAACACCGGGGATCAG GCT CTGATCTCCGGTGTTC-TGC TTTTTACGCTGCGTC TERM 2003 1905103 - 1905142 + F 100 -21 -3.37188 | gap 1, opp_overlap 1905105 1905109, overlap 1905102 1905106 1905109 GGGCATCGTTTCAGA CATGAACACCGGGGATCAG GCT CTGATCTCCGGTGTTC-TG CTTTTTACGCTGCGT TERM 2004 1905141 - 1905105 - f 95 -18.1 -2.87564 | opp_overlap 1905103 1905102 1905106 1905109, overlap 1905109 GCATCGTTTCAGACA TGAACACCGGGGATCAG GCT CTGATCTCCGGTGTTCT GCTTTTTACGCTGCG TERM 2005 1905106 - 1905140 + F 100 -23.8 -3.25166 | opp_overlap 1905105 1905109, overlap 1905103 1905102 1905109 CATCGTTTCAGACAT GAACACCGGGGATCAG GCT CTGATCTCCGGTGTTC TGCTTTTTACGCTGC TERM 2006 1905137 - 1905109 - f 100 -17.5 -3.32022 | opp_overlap 1905109 1905106 1905103 1905102, overlap 1905105 CGTTTCAGACATGAA CACCGGGGATCAG GCT CTGATCTCCGGTG TTCTGCTTTTTACGC TERM 2007 1905109 - 1905137 + F 100 -19.7 -3.75505 | opp_overlap 1905105 1905109, overlap 1905106 1905103 1905102 CGTTTCAGACATGAA CACCGGGGATCAG GCT CTGATCTCCGGTG TTCTGCTTTTTACGC Atu4737 1905245 - 1905427 + | hypothetical protein TERM 2008 1906224 - 1906190 - g 70 -10.6 -3.54424 | GCGGAGCGGCTGAAA GCTGCAATGCCGCTGA TGA CCAGCGGCAATGTCGC GGCGCTCTATCGTTT cat 1905632 - 1906261 + | chloramphenicol acetyltransferase TERM 2009 1906271 - 1906303 + T 74 -10.4 -3.61178 | opp_overlap 1906269 1906271 1906272, overlap 1906272 CTCTAGCGGTAAAGA TTGCCGGCCCGTCC AGACA GAGCGGGCCGGCGC TTTCGCCTGGATCAG TERM 2010 1906272 - 1906302 + T 79 -13.9 -2.76492 | opp_overlap 1906271 1906269 1906272, overlap 1906271 TCTAGCGGTAAAGAT TGCCGGCCCGTCC AGACA GAGCGGGCCGGCG CTTTCGCCTGGATCA TERM 2011 1906302 - 1906272 - T 72 -11.7 -2.61695 | opp_overlap 1906272 1906271, overlap 1906271 1906269 TCTAGCGGTAAAGAT TGCCGGCCCGTCC AGACA GAGCGGGCCGGCG CTTTCGCCTGGATCA Atu4739 1908117 - 1906315 - | flavin-containing monooxygenase TERM 2012 1907679 - 1907727 + g 70 -4.4 -4.46615 | gap 2, overlap 1907681 TTTCCTTCCAGGTCC GGCGGCTG-CGGTCG-TGGCCGTG TTC CGCGCCCATCGGCCGGCGAATGCC TTTTGGTTCCTCGTG TERM 2013 1908229 - 1908177 - R 89 -13.4 -3.53012 | gap 1, opp_overlap 1908175 1908177 1908177, overlap 1908182 1908184 GTCGCCGCCCCGAAA GCCAAT-ACCCGCGCCTGCCGGG CTCCTCTT CCCGGCAGGCGCAGGCGAAAAGC CTATTTCGAAAGATC TERM 2014 1908223 - 1908182 - R 100 -18.7 -3.27525 | opp_overlap 1908177 1908177 1908175, overlap 1908177 1908184 CGCCCCGAAAGCCAA TACCCGCGCCTGCCGGG CTCCTCTT CCCGGCAGGCGCAGGCG AAAAGCCTATTTCGA TERM 2015 1908221 - 1908184 - R 100 -23.5 -3.20349 | opp_overlap 1908177 1908177 1908175, overlap 1908182 1908177 CCCCGAAAGCCAATA CCCGCGCCTGCCGGG CTCCTCTT CCCGGCAGGCGCAGG CGAAAAGCCTATTTC Atu4740 1909303 - 1908230 - | zinc-binding dehydrogenase TERM 2016 1908730 - 1908703 - G 77 -3.2 -4.9792 | gap 1 GATCGGAGACAAAAA GCTGGGTAGCGCC GGC GGCGCGGGCC-GC CAGAAGCGTCAACAT TERM 2017 1908865 - 1908884 + g 76 -10 -3.76048 | CTTCGTCGGTCATCT CGTCCGGA ATTT TCTGGACG TTGTATTCGTTGACA TERM 2018 1909008 - 1908973 - G 75 -8.3 -4.2349 | gap 1, overlap 1908974 TGCTGAGATGGAAAA GGCCACGATC-AGCGA AATAA TCGCCGGATCGCGGCA TGATGAGCGGCTGGA TERM 2019 1909452 - 1909468 + r 77 -8 -4.13767 | overlap 1909439 CAGCTGTGGCATATG CCTCAC CTTCA GTGAGG TTTTCCGATGCCGAG acoR 1911343 - 1909460 - | transcriptional regulator Atu4742 1911790 - 1911467 - | hypothetical protein Atu4743 1912966 - 1911887 - | LacI family transcription regulator TERM 2020 1911990 - 1912004 + g 76 -5.6 -4.63486 | overlap 1911991 TCGATGATGGTGACT TCGGGC TCC GTCCGG TTTTCTTCCAGCAGT TERM 2021 1912141 - 1912103 - G 75 -13.8 -2.8934 | overlap 1912098 1912095 CGCGAAAGGATCATA GTCGAAGCAGCCGACGAC GAT GTCGCCGAATGCCTCGCC GTCATGACGCCCCAT TERM 2022 1912612 - 1912624 + g 73 -9.1 -3.95324 | AGGCGATCAGCGTCT CGACG GTG CGTCG TTCTTCTTCGGGGTC TERM 2023 1912738 - 1912721 - G 71 -7 -4.26327 | overlap 1912718 CATCGATGAAAAGAA CCGGTT GTCATA AACCGG CACCAAAAGCCCAAC Atu4744 1913329 - 1914183 + | ABC transporter, substrate binding protein (sugar) TERM 2024 1915588 - 1915611 + G 73 -10.2 -3.62096 | overlap 1915572 1915571 CCGACCGTGGGTGTC GACGTCGGCG CCCG CGCCGGCATC TTTGAAATCGTCCGC Atu4745 1914301 - 1915791 + | ABC transporter, nucleotide binding/ATPase protein (sugar) Atu4746 1915784 - 1916800 + | ABC transporter, membrane spanning protein (sugar) Atu4747 1916797 - 1917792 + | ABC transporter, membrane spanning protein (sugar) Atu4748 1917794 - 1918645 + | D-tagatose 3-epimerase TERM 2025 1918845 - 1918857 + G 76 -5.5 -4.62783 | CTCGCAGGCGAAGGC GTGTC CGC GGCAC TTTTTCCGATGGATG Atu4749 1918683 - 1919345 + | putative fructose transport system kinase TERM 2026 1919898 - 1919914 + G 74 -7.2 -4.38154 | opp_overlap 1919896 CACGTCCTCAACACG GCGGCG GAAGG CGTCGC TTTTGTGAAGGATGT dpe 1919412 - 1920281 + | D-psicose 3-epimerase TERM 2027 1921271 - 1921242 - g 90 -5 -5.4505 | gap 2, overlap 1921243 1921244 TGTCTGAAGAAAAAA TGGTCGGGACGGAG CGTT CTCCG-CCCGGC-A CGGAAATCCGCTTGA Atu4751 1920431 - 1921426 + | hypothetical protein Atu4752 1922233 - 1921454 - | ABC transporter, nucleotide binding/ATPase protein (amino acid) Atu4753 1922922 - 1922230 - | ABC transporter, membrane spanning protein (amino acid) TERM 2028 1922701 - 1922688 - G 72 -2.3 -4.77983 | overlap 1922700 AATAGAGGAAGAAAA GCTGC ACCA GAAGC GGCGTATCGCGAAGG Atu4754 1923600 - 1922935 - | ABC transporter, membrane spanning protein (amino acid) TERM 2029 1923415 - 1923405 - G 78 -6.8 -4.60977 | overlap 1923397 AATAGAACCAGAAAA GCTG GAC CAGC AGCGAGGTGCCGCGA Atu4755 1924512 - 1923661 - | ABC transporter, substrate binding protein (amino acid) Atu4756 1925586 - 1924573 - | hypothetical protein TERM 2030 1924683 - 1924697 + g 70 -4.2 -4.56775 | opp_overlap 1924694 AGGCACGGTATTCGA CCGG CGCAAGA CCGG TTTTTCCAACGGGGT TERM 2031 1925480 - 1925515 + g 76 -14.8 -2.64107 | gap 1, overlap 1925468 ACCGACCCCCATGCA CTGTCATC-GCGGCTGT ATG GCAGCCGCAGATGACCG TGCTGTACGCCTTTC Atu4757 1926768 - 1925590 - | Xaa-Pro dipeptidase TERM 2032 1925804 - 1925824 + g 72 -11.9 -3.28537 | TAAGAGAGGCCGATT GGATAACCG GTG CGGTTGTCC TTGATGATTCCGTAT TERM 2033 1926663 - 1926694 + g 84 -10.1 -4.1899 | opp_overlap 1926678 1926681 AATGCATGTTGGATG GGTCGGTGACGAC AAGCAG GTCGATACCGGCC TTTTCCATGGCATCG arcB 1927778 - 1926765 - | ornithine cyclodeaminase tdcB 1928770 - 1927775 - | threonine dehydratase TERM 2034 1928314 - 1928330 + g 83 -2.1 -5.24129 | overlap 1928315 GATCGAAAGGTGGGA TCGCGGT CAG GCCTCGG TTTTTTGTCAGGCGC TERM 2035 1928737 - 1928747 + g 78 -4.6 -4.83169 | TCGCGGCCAGCGAGA CCGG AAG CTGG TTTTTATCGGCGGAT Atu4760 1930310 - 1928862 - | GntR family transcriptional regulator TERM 2036 1929753 - 1929737 - G 75 -2.1 -4.89852 | opp_overlap 1929737 TCAGAGCGAGAAAAA TGCCGTG CGC CGCGCCA TTGGTGACAAGAATG TERM 2037 1929885 - 1929915 + g 71 -5.4 -4.32034 | gap 1, overlap 1929886 AGAATTGTCACTATC GGCCATCTCGCGC AGAATG GTGCGAGA-GGCA TTTTCATGGTCATCG bioA 1931874 - 1930471 - | hypothetical protein TERM 2038 1930609 - 1930642 + g 79 -12.5 -3.53811 | gap 1, opp_overlap 1930596 1930595 1930623 ATCGCCGTGCGGCAT GGC-GCGCGCAATG AGGCCGC CGTTGCGCGCCGCC TTTGAAACGCGTGCG TERM 2039 1931250 - 1931262 + g 71 -6.9 -4.14392 | TGAGGGCTTCCAGTT CGGCG GCG CGTCG TTTTGAGAATTCCAG gabD 1933366 - 1931888 - | succinate semialdehyde dehydrogenase Atu4763 1933488 - 1933955 + | AsnC family transcriptional regulator Atu4764 1934015 - 1934575 + | acetyltransferase TERM 2040 1935859 - 1935870 + G 71 -7.2 -4.15044 | overlap 1935857 GGCATGAGCCAGTTC GCCG ATGG CGGC TTTCTTGGAACGAAG Atu4765 1934620 - 1936143 + | hypothetical protein Atu4766 1936614 - 1936189 - | hypothetical protein TERM 2041 1936285 - 1936275 - G 71 -6.8 -4.16943 | opp_overlap 1936275 1936282 GCCCATACTGGAAAA TGCC ATA GGCA TTGTTGTTGCCGTTC TERM 2042 1936390 - 1936402 + g 71 -6.9 -4.20368 | overlap 1936375 GCCCGCCGCATTGCC GCGGC CGA GCTGC TTTATGTTGGCATCC TERM 2043 1936738 - 1936719 - R 100 -12.8 -5.07652 | GCGCGCAAAAGAAAA GGGCGCCA GAAA CGGCGCCC TCTCAGGTGAAAATT Atu4767 1937168 - 1936770 - | hypothetical protein Atu4768 1937666 - 1937229 - | hypothetical protein Atu4769 1938524 - 1937805 - | hypothetical protein Atu4770 1939819 - 1938707 - | hypothetical protein TERM 2044 1938924 - 1938893 - G 76 -6.5 -4.48713 | gap 1, overlap 1938894 GGGACGAACAACAAA GGCGGCGTCTC-CG ACCAG CGCGATACGCCGCG ACACCATCTGTTCCG Atu4771 1941178 - 1939931 - | oxalate decarboxylase Atu4772 1941644 - 1941180 - | hypothetical protein Atu4773 1942343 - 1941969 - | two component response regulator nodW 1943064 - 1942408 - | two component response regulator Atu4775 1944637 - 1943057 - | two component sensor kinase TERM 2045 1944881 - 1944857 - R 77 -4.9 -4.86731 | opp_overlap 1944859 1944873 1944879, overlap 1944852 GCGGCGGAAAGAAAA GCGCGAAGC GATCGCT GCCTTGCGC GCCTGTCCCGCGTTC fdhF 1947192 - 1944898 - | formate dehydrogenase alpha subunit TERM 2046 1947125 - 1947159 + g 78 -7.3 -4.68424 | gap 2, opp_overlap 1947134, overlap 1947127 1947131 1947135 GTCTTCGCGACGGCC TTCAATGCATCCCAGCC ACC GGCTGGG-TG-ATTGTA TTTTTCAATACCTTC TERM 2047 1947127 - 1947157 + g 78 -9.9 -3.95214 | gap 2, opp_overlap 1947134, overlap 1947125 1947131 1947135 CTTCGCGACGGCCTT CAATGCATCCCAGCC ACC GGCTGGG-TG-ATTG TATTTTTCAATACCT TERM 2048 1947135 - 1947151 + g 76 -13.7 -3.06384 | opp_overlap 1947134, overlap 1947131 1947127 1947125 CGGCCTTCAATGCAT CCCAGCC ACC GGCTGGG TGATTGTATTTTTCA TERM 2049 1947339 - 1947314 - H 100 -13.2 -6.07969 | CAAAATGAAAAAAAA GGCCGCCTCC TGCGGC GGGGGCGGCC TTGGCGGATCGGGAG TERM 2050 1947367 - 1947388 + H 71 -7.2 -4.00066 | overlap 1947360 1947382 GAGGGAGATCCGCGG CTCCGGGG AGGGGA CGCCGGAG TTTCTGGCTTCTGCG Atu4777 1947602 - 1948120 + | hypothetical protein TERM 2051 1948212 - 1948230 + G 76 -12.4 -3.37091 | overlap 1948206 GCCGCGCTTTCCACT GCGATGGC CAT GCCGTCGC TTGCATTTTCAAAAT cpo 1948140 - 1949120 + | non-heme chloroperoxidase TERM 2052 1949133 - 1949160 + T 77 -11.2 -3.5812 | opp_overlap 1949133 1949132 1949131, overlap 1949131 TGATCGCATAAAACG GCCGCTACCTGC AGAA GCGGATGGCGGC TATTTCTCGTAAATA Atu4779 1949591 - 1949193 - | hypothetical protein Atu4780 1949708 - 1950796 + | hypothetical protein TERM 2053 1950844 - 1950813 - T 95 -15.1 -3.38272 | CAGTACGAGTGATAA GAGCGGACCTCCG CAACAC CGGGGGCCCGCTC CAGCAAGACGATCAA TERM 2054 1950883 - 1950903 + T 100 -9 -5.65927 | overlap 1950876 TATTCCCCGCTGCAA CCGCTATC CTCAC GATGGCGG TTTTTTGTTTCCGTG Atu4781 1953104 - 1950972 - | two component sensor kinase drrA 1953847 - 1953101 - | two component response regulator TERM 2055 1954874 - 1954856 - g 72 -2.2 -4.72986 | opp_overlap 1954856 1954857, overlap 1954857 CAGGGGCACGAAAAA CCGGGAGG AAG CCCGTCGG TTCGTGGACTTTGCG afuA 1954065 - 1955093 + | ABC transporter, substrate binding protein (iron) afuA 1955192 - 1956217 + | ABC transporter, substrate binding protein (iron) TERM 2056 1956228 - 1956262 + F 72 -12.2 -2.71924 | overlap 1956209 1956227 ACTGATATCCCATGT CGGCTGCCTTCGTT TCTCAAT GACGAAGGCAGCCC CTTTCCGACACACTC TERM 2057 1956369 - 1956385 + G 78 -2.1 -5.09426 | overlap 1956370 1956383 TGCTGGTGCCCTGGT ACCGCAT CGA AAGCGGC TTTTTTGGCCTTGGC TERM 2058 1958477 - 1958467 - g 71 -8.2 -4.07568 | overlap 1958468 TCTGCGGCGCGAAAA CCGC GTC GCGG GCCTCGATGCAGCCA afuB 1956296 - 1958527 + | ABC transporter, membrane spanning protein (iron) TERM 2059 1959418 - 1959438 + G 70 -12.5 -2.87132 | GGCAGCGGCATGCCC GGCCGCGTG CTG CACACGGCC TATCTCGGCGGCCAC afuC 1958524 - 1959585 + | ABC transporter, nucleotide binding/ATPase protein (iron) TERM 2060 1960351 - 1960335 - g 71 -6.5 -4.19238 | opp_overlap 1960314 GCTGGAAGGCGAAAA GCTGTTC GAA GGACAGC CCGTCCTCGCTGGCA Atu4787 1959613 - 1960422 + | inositol monophosphatase family protein TERM 2061 1960471 - 1960454 - T 81 -8.3 -4.28254 | opp_overlap 1960455 1960464, overlap 1960429 1960455 TCCCAATATCGAAAA GCGGCCG GTAG CGGCCGT TTTTTGCCGCTTTAA TERM 2062 1960455 - 1960470 + T 100 -11.8 -5.07107 | opp_overlap 1960429 1960454 1960455, overlap 1960464 CCCAATATCGAAAAG CGGCCG GTAG CGGCCG TTTTTTGCCGCTTTA TERM 2063 1960470 - 1960455 - T 78 -11.8 -3.1647 | opp_overlap 1960455 1960464, overlap 1960429 1960454 CCCAATATCGAAAAG CGGCCG GTAG CGGCCG TTTTTTGCCGCTTTA Atu4788 1961638 - 1960559 - | hypothetical protein TERM 2064 1960991 - 1960979 - G 77 -3.3 -4.99947 | opp_overlap 1960979, overlap 1960974 CGGAACGAAAGAAAA CGGCA GGC TGCGG ATTTCGCGCAAGGGC gmd 1961955 - 1963025 + | GDP-mannose 4,6-dehydratase TERM 2065 1963196 - 1963219 + G 81 -5.2 -4.87665 | gap 1, opp_overlap 1963196, overlap 1963198 1963199 AGACGGAGCAATGGA TGG-CGGCGGC AAG GCCGCAGGTCA TTTTTGTCGCTGCCG fcl 1963036 - 1964004 + | GDP-fucose synthetase TERM 2066 1964809 - 1964798 - g 77 -3.6 -4.91109 | GGCGCAGGATAAAAA GCGC ATCG ACGC CCGGCAGTTCGGGGC Atu8097 1964001 - 1965950 + | hypothetical protein Atu4791 1965987 - 1966475 + | hypothetical protein TERM 2067 1966638 - 1966693 + T 79 -11.2 -3.67296 | gap 1, overlap 1966639 1966650 1966689 TTTTCATTTCAGGCG AGGGGACCGACGGATCGTTCGTTACTC CAT GAGTGGCGAGCGGTCTGT-GGTTCCAG TTTGACTGGGTAATA TERM 2068 1966639 - 1966692 + T 83 -14.7 -2.80056 | gap 1, overlap 1966638 1966650 1966689 TTTCATTTCAGGCGA GGGGACCGACGGATCGTTCGTTACTC CAT GAGTGGCGAGCGGTCTGT-GGTTCCA GTTTGACTGGGTAAT TERM 2069 1966650 - 1966682 + T 81 -13.5 -2.9296 | overlap 1966639 1966638 GCGAGGGGACCGACG GATCGTTCGTTACTC CAT GAGTGGCGAGCGGTC TGTGGTTCCAGTTTG TERM 2070 1966816 - 1966787 - T 70 -9.2 -3.68351 | overlap 1966789 TGTGCAGGACGCAAA TAGGCTCGCCCG GTTGAA CGAGCGAGCCCT CCCAGTTACCAGGTA TERM 2071 1966814 - 1966789 - T 95 -14 -3.42395 | overlap 1966787 TGCAGGACGCAAATA GGCTCGCCCG GTTGAA CGAGCGAGCC CTCCCAGTTACCAGG TERM 2072 1966848 - 1966834 - T 70 -9.2 -3.68827 | CAGTTACCAGGTAAA CCCCGG TTA CCAGGG ACCCGCCAAAGTATC Atu4792 1967313 - 1967017 - | hypothetical protein bme11 1968796 - 1967537 - | exopolysaccharide production protein bme12 1970962 - 1968800 - | polysaccharide biosynthesis protein TERM 2073 1970551 - 1970561 + g 74 -3.2 -4.72846 | overlap 1970556 GAACATTGGTCATGA GGTT GTC GACC TTTTTCGATGTCTCG TERM 2074 1970606 - 1970650 + g 76 -5.6 -4.58395 | gap 1 CGTGGTCACGTCGTT GGTCGCCCGATCGGAG-TTGG TTTG CCGCCCTTCGAGCAGGCGATC TTTTTGCAGGATGAC bme13 1971727 - 1971017 - | LuxR family transcriptional regulator TERM 2075 1971677 - 1971653 - G 70 -12.8 -2.88861 | opp_overlap 1971673 TATGATGCCGATATA GCCGGCCGCA CTGGC TGCGGCCTGC GGATGCGGTGCGCCT Atu4796 1972458 - 1971814 - | hypothetical protein rfbF 1973276 - 1972464 - | glucose-1-phosphate cytidylyltransferase Atu4798 1974565 - 1973273 - | hypothetical protein TERM 2076 1973812 - 1973832 + g 100 -7.6 -5.5208 | gap 1, overlap 1973815 CGACATCGAAAACCT TGAGCCCGT GACG ACGGGC-CA TTTTTTCTATTGTCA Atu4799 1974870 - 1975397 + | dTDP-4-dehydrorhamnose 3,5-epimerase Atu4800 1976745 - 1975402 - | hypothetical protein TERM 2077 1976173 - 1976197 + g 78 -2.9 -5.02074 | gap 1, opp_overlap 1976185, overlap 1976172 CGGATGACAGATATG CG-CGAAGAG AAGCAC CTCTTTGGCG TTTTTTCCGCGATGC Atu4801 1977829 - 1976759 - | NAD-dependent epimerase/dehydratase hemL 1979350 - 1977947 - | glutamate-1-semialdehyde 2,1-aminomutase TERM 2078 1978418 - 1978439 + g 77 -14.5 -2.70354 | overlap 1978415 1978414 GTAAACTTTCATGGT TGCGATGGC CGCC GCCATCGCA TGCGTTTCTGCACCA Atu4803 1980294 - 1979566 - | two component response regulator TERM 2079 1981641 - 1981629 - g 70 -4.7 -4.43877 | overlap 1981630 1981631 GAAGCTGCAAAGAAA TCCGC CGA GCGGG CGACCGAGGCCAAGT TERM 2080 1981899 - 1981910 + G 72 -2.2 -4.77567 | AACCTTCTGGGACTG CTCT TCAA GGAG TTTTATTATCCCGCT Atu4805 1980996 - 1983404 + | two component sensor kinase/response regulator hybrid pssF 1984397 - 1983438 - | glycosyltransferase TERM 2081 1983639 - 1983604 - G 76 -12.4 -3.28708 | overlap 1983593 1983606 GAAAGCGCACACCAA TAGGCGCGGTCGCTCA GGCT CGCGCGACCGCGCCGG AGCAGGGTCTTGGCA TERM 2082 1983637 - 1983606 - G 91 -19.4 -3.20345 | overlap 1983593 1983604 AAGCGCACACCAATA GGCGCGGTCGCTCA GGCT CGCGCGACCGCGCC GGAGCAGGGTCTTGG pssL 1985905 - 1984394 - | exopolysaccharide export protein TERM 2083 1984582 - 1984532 - G 100 -18.2 -4.30719 | overlap 1984528 GTGGCGCAGAAGAAA CAGGCCGGCGGCCCAGCCCGTC ACCGAAA GAAGGACGGCGCCGCCAGCCTG GGCGAGGGAGTAATC TERM 2084 1985555 - 1985522 - G 79 -9.6 -4.21462 | gap 1 ACGCAGCATGGAAAA CGCCGGCAT-GCCAA GGCTT TCGGCCATGACGGCG GCTATTGCGAGGACA amsJ 1987363 - 1986131 - | exopolysaccharide synthesis protein Atu4809 1987634 - 1988833 + | glycosyltransferase TERM 2085 1989607 - 1989619 + G 89 -4.7 -5.1861 | ATCGTTACCGATCTG GACCG AGA CGGCC TTTTTTCCTCATCGA Atu4810 1988838 - 1990157 + | hypothetical protein TERM 2086 1991364 - 1991351 - g 82 -9.5 -4.36914 | opp_overlap 1991359 TTTGCCGGGATAAAA GCCGG TGTG CCGGC GGAAGTGATGGCCGC rfe 1990412 - 1991557 + | undecaprenyl-phosphate alpha N-acetylglucosaminyltransferase bme2 1991565 - 1992263 + | hypothetical protein TERM 2087 1992634 - 1992667 + G 84 -10.3 -4.17762 | opp_overlap 1992642 CGAGTTGACCATTGC GGTGCAAATGACCGG TGTT CCGGTCATGTACATC TTCTTTTCGCGGCTG TERM 2088 1992659 - 1992642 - g 74 -11.3 -3.53444 | opp_overlap 1992634 CCATTGCGGTGCAAA TGACCGG TGTT CCGGTCA TGTACATCTTCTTTT bme3 1992320 - 1993537 + | hypothetical protein TERM 2089 1993691 - 1993707 + G 79 -7.9 -4.46212 | overlap 1993692 TGGACGCCGCCGCCG ATGCGCC GCT GGCGCAA TTTTCTCCTGCGCAG TERM 2090 1993692 - 1993706 + G 72 -11.4 -3.27406 | overlap 1993691 GGACGCCGCCGCCGA TGCGCC GCT GGCGCA ATTTTCTCCTGCGCA bme4 1993541 - 1994149 + | acetyltransferase bme6 1995288 - 1994113 - | glycosyltransferase bme7 1996568 - 1995285 - | glycosyltransferase TERM 2091 1996235 - 1996205 - G 80 -11.8 -3.71649 | gap 1, overlap 1996224 CGCTGAAAGCGTAAA GCCCGGCTGCGCC ATGGAA GCCGC-GCCGGGC GACCATTTCGGAGAA bme8 1997818 - 1996565 - | glycosyltransferase TERM 2092 1997435 - 1997425 - G 81 -5.4 -4.72986 | CAGTCTCAGGAAAAA GATC CAT GATC CAGTTCACCATGAGT TERM 2093 1998032 - 1998014 - R 70 -5.2 -4.47873 | overlap 1998016 AGAAGATCCATAAAA TGCCAGCC AAT GAATGGCA GGAGGCGGTTGACTT TERM 2094 1998221 - 1998238 + r 71 -10.5 -3.20723 | overlap 1998214 CTATCTTGCCGGTAC GCGGCCG GTGC CGGTCGC TTCCATTGATGGAGG lrp 1998724 - 1998206 - | AsnC family transcriptional regulator Atu8042 1998786 - 1999451 + | hypothetical protein Atu4819 1999471 - 1999845 + | hypothetical protein TERM 2095 1999841 - 1999830 - T 74 -7.2 -4.07568 | opp_overlap 1999814 GTTGCCTGCGGAAAA GCCG CAGG CGGC GTGAGTTGTAGTAAG TERM 2096 1999855 - 1999898 + T 72 -12.4 -2.56124 | gap 1, opp_overlap 1999856, overlap 1999854 1999853 1999852 GCGTGAGTTGTAGTA AGGCAGGCCG-GTGAGTTGCG CAG CGCAACTCATGCGGCGCGCCC CTGTCTTTCGGTCAG TERM 2097 1999897 - 1999856 - T 93 -15.9 -3.15544 | gap 1, opp_overlap 1999855 1999854 1999853 1999852 CGTGAGTTGTAGTAA GGCAGGCCG-GTGAGTTGCG CAG CGCAACTCATGCGGCGCGCC CCTGTCTTTCGGTCA Atu4820 2000777 - 1999884 - | hypothetical protein fabG 2001553 - 2000774 - | 3-oxoacyl-(acyl-carrier protein) reductase Atu4822 2003225 - 2001585 - | acyl-CoA synthetase TERM 2098 2002412 - 2002424 + g 76 -5.5 -4.65895 | opp_overlap 2002407, overlap 2002407 GTACAGTGAAGGCGT TGGTG ATA CGCCA TTTTTCGATCAGCGC acaB 2004391 - 2003222 - | acetyl-CoA acetyltransferase TERM 2099 2003860 - 2003876 + g 82 -11.5 -3.9122 | GGGCATAGGGATTGA CCGCGCC ATT GGCGTGG TTCTTTGCGGCAATC TERM 2100 2004032 - 2004048 + g 77 -3.5 -5.00616 | overlap 2004033 2004035 TTCGCCCACATCTGC GGTCGGC AGC GCCGTCA TTTTTTCGGCGCCGA TERM 2101 2004281 - 2004253 - G 75 -8.1 -4.26076 | overlap 2004254 TCACGCCGACGAAAA TGCCGTCGATATC GCT GACATCGACGCCC GCATGGTCTATGGCC Atu4824 2005254 - 2004388 - | IclR family transcriptional regulator TERM 2102 2004856 - 2004824 - G 70 -9.8 -3.53343 | gap 1, opp_overlap 2004824 2004846 AAGGGGTGTTCGAAA CCGGCCTGAAGCGCA TGGG TGCGCACC-GGCCAG GTGCCTTCTTCGCGG Atu4825 2006071 - 2005256 - | dehydrogenase TERM 2103 2005358 - 2005348 - G 72 -2.4 -4.8667 | overlap 2005349 CAGATGCGAGAAAAA CGGC GGC GCGG GCAATATCAAAGGCA TERM 2104 2006094 - 2006120 + r 100 -18 -3.01712 | opp_overlap 2006087 2006089 GTCAGACATAGTCGG GTTGGCCCCGCT ACG GGCGGGGCCAGC TATTCAACGGGCCGG Atu4826 2007146 - 2006136 - | ABC transporter, substrate binding protein Atu4827 2009089 - 2007212 - | ABC transporter, membrane spanning protein TERM 2105 2007861 - 2007887 + g 75 -8.6 -4.25104 | TTGCCGACCTGCGGC CATGGCGTGCGC TTT GCGCCTTCCATG TTTTCATCCCGCGCC TERM 2106 2008047 - 2008097 + g 70 -10.5 -3.51232 | gap 1, overlap 2008043 GTATCGGCCATGGCG GCGCCGGTGGCCAAAAGCGCGA TCATTTCC TTGGGTTTGTGGCCA-CGGCGC TTCATTTCCGGAAAC TERM 2107 2009278 - 2009258 - R 75 -6.9 -4.38712 | opp_overlap 2009258, overlap 2009261 TGGACCCTTACAAAA CCATGTATC CGA GATACACAG GATGTTTAACGAAAT TERM 2108 2009592 - 2009612 + r 76 -9 -4.07124 | overlap 2009583 TCTTCTTCGGTCGCC GGTTCTCG TTCTT CGAGAGCC TTTATCTGGCTGATC Atu4830 2010879 - 2010184 - | hypothetical protein TERM 2109 2010303 - 2010285 - G 100 -12.4 -4.41348 | CGGGGTCGAAACAAA CCAGGCAG TTT CCGCCTGG CGCACGGACTGAGGG Atu4831 2011265 - 2010876 - | hypothetical protein TERM 2110 2011355 - 2011374 + H 78 -12.2 -3.16608 | overlap 2011334 2011345 2011355 2011359 GAAGTGGCTCCCACC GCAAGAGC CTTT GCTCTTGC TTCGATCATTTGCGT TERM 2111 2011710 - 2011733 + G 74 -6 -4.46926 | gap 1, overlap 2011709 GATGAGGGTGTGAGC GTGTCTGCGCT GCT GGCGC-GATAC TTTTCTGGTCCAGTG TERM 2112 2011750 - 2011779 + G 88 -2.9 -5.51612 | gap 1, overlap 2011752 TTTCTGGTCCAGTGA CTG-CATCAAAATC CTG GATATTGATGGCCG TTTTCTTTTTTATGT Atu4832 2011653 - 2012027 + | hypothetical protein TERM 2113 2012285 - 2012262 - f 79 -12.5 -2.92613 | opp_overlap 2012260 2012259, overlap 2012264 2012266 TCGGATTTGAAATTA GAGACGGGA ACCACA TCCCGTCTC GCGTTTCATTCCGGA TERM 2114 2012753 - 2012725 - g 78 -6.5 -4.66609 | opp_overlap 2012725 2012733 TATCGGATTGAAAAA CAGGTCATCACCG ATC CGGCGCGGGCCTG TGTTCTTCTGCATGT TERM 2115 2014324 - 2014312 - g 74 -3.3 -4.78752 | ACCACAATGGAAAAA TCGGC GGG GCAGA GCGGCCTTTTCCCCG cga 2012401 - 2014803 + | glucoamylase Atu4834 2014841 - 2015845 + | 6-phosphogluconate dehydrogenase-like protein Atu4835 2015842 - 2017227 + | glucose-6-phosphate 1-dehydrogenase Atu4836 2017260 - 2017937 + | hypothetical protein TERM 2116 2018347 - 2018359 + G 84 -3.3 -5.27335 | overlap 2018348 GATATTCGGCCACGC ATCCG GCA CGGAA TTTTTCTTTGCGGCA Atu4837 2018054 - 2018611 + | hypothetical protein Atu4838 2018638 - 2019168 + | outer membrane lipoprotein csgA 2019188 - 2019886 + | C factor Atu4840 2020579 - 2020376 - | hypothetical protein TERM 2117 2020586 - 2020609 + r 70 -6.8 -4.17048 | gap 1, opp_overlap 2020583 CTCCTTCAACGAGCA GCGGAAACGTG CGC CAT-TTTCCGC TTATTTTACAAACGG deoR 2021341 - 2020610 - | DeoR family transcriptional regulator TERM 2118 2022401 - 2022441 + G 72 -2.9 -4.77165 | overlap 2022403 2022403 GCCGACATCCGCAGG CGCTGGCCGCCTGATCGCC GAG GGCGGCCTGTCGGGCAAGG TTTTCTTCTCGGGAA Atu4842 2021679 - 2022725 + | ABC transporter, substrate binding protein (sugar) TERM 2119 2023673 - 2023719 + G 71 -7.4 -4.1466 | gap 3, overlap 2023716 TCGGGTTTGATCGGT TCGGGGCGTA--CCGAACTTGCG CTGG CGCT-GTTTGGCATGCGCCCCGA TTTTACCGGTTCAGT Atu4843 2022797 - 2024296 + | ABC transporter, nucleotide binding/ATPase protein (sugar) rbsC 2024310 - 2025287 + | ABC transporter, membrane spanning protein (sugar) ydeZ 2025302 - 2026300 + | ABC transporter, membrane spanning protein (sugar) Atu4846 2026305 - 2027387 + | hypothetical protein rbsk 2027412 - 2028350 + | ribokinase deoC 2028370 - 2029329 + | 2-deoxyribose-5-phosphate aldolase TERM 2120 2030895 - 2030882 - g 72 -2.3 -4.8048 | opp_overlap 2030882, overlap 2030884 CGCTGACAGCAAAAA GGCGA TCGA TGGCC TTGATCGGACTATGA Atu4849 2029371 - 2031737 + | NADP-dependent aldehyde dehydrogenase TERM 2121 2031773 - 2031801 + F 79 -7.5 -4.42653 | gap 1, opp_overlap 2031787, overlap 2031774 2031774 CAACTGACAAGTTTG TCT-ACGGGGAC AAGGCG GTCCCCGTAAGG TTTTATCCGTGAGAT Atu4850 2032206 - 2032778 + | hypothetical protein TERM 2122 2033519 - 2033533 + G 73 -4.2 -4.62069 | TGAAGCTGCCTCGCG GTGCGG CGC TTGCAC TTTTTGCCGTAGCAC Atu4851 2033050 - 2033634 + | citrate synthase-like protein Atu4852 2034211 - 2033669 - | hypothetical protein TERM 2123 2033948 - 2033938 - G 80 -4 -5.08824 | opp_overlap 2033942, overlap 2033942 GTTCTACTGAAAAAA GATA GAT TATC CGTATAATCATTATT Atu4853 2034966 - 2034379 - | hypothetical protein TERM 2124 2035709 - 2035694 - g 75 -2.5 -4.93812 | overlap 2035695 AAAATACAAAAGAAA CGGAG TGCTCT CTCCA GTCGCGCCCGGTCAG Atu4854 2035584 - 2035787 + | hypothetical protein traA 2039609 - 2035809 - | conjugation protein TERM 2125 2036351 - 2036368 + g 81 -5.5 -4.75776 | overlap 2036314 2036352 GCTCCGGCTGCCCGG CCATGGC TTTC GCCATGA TTTTTCCATTGCCTT TERM 2126 2037539 - 2037567 + g 76 -7.3 -4.56597 | CGATCCGACCCTTCT CGACATCCTCGAC CGT GCCGAGCATGCCG TTTTTCACACCGAGG Atu4856 2040246 - 2041172 + | nucleotidyltransferase mobC 2041332 - 2041667 + | mobilization protein C traG 2041664 - 2043328 + | virulence virD4-like protein Atu4859 2044748 - 2043675 - | hypothetical protein Atu4860 2045216 - 2046151 + | hypothetical protein TERM 2127 2046237 - 2046262 + T 100 -4.8 -6.02919 | gap 2, opp_overlap 2046237 GGTATTTGCGACGAA GCTCCTC--CTC ATAT GAGTCGAGGAGC TTTTTTTGTTTCTCC TERM 2128 2046640 - 2046698 + T 95 -18 -2.83903 | AACCAGGCCACTATC GGCGCACGCATGAGACCTCCGGGAGTGC GTA GCCCGAGCGGGGTTCTCATGCGTGCGCG TCGATTTTTGAAAGG istB 2047475 - 2046717 - | IS21 family transposase istA 2048968 - 2047472 - | IS21 family transposase TERM 2129 2048347 - 2048334 - G 83 -2.3 -5.252 | overlap 2048335 2048344 TAGTGGGACAAAAAA CCGCT GAAC AGCGC CGCACGCTTGCGGGT TERM 2130 2049703 - 2049691 - g 70 -3.3 -4.66609 | CACCTGACGCAAAAA GGGGA TGA TCTCC GGACTAGCGCTTCGG Atu4864 2049367 - 2049819 + | MarR family transcriptional regulator Atu4865 2050919 - 2050038 - | oxidoreductase TERM 2131 2050752 - 2050730 - G 74 -12.8 -3.14211 | overlap 2050747 ATTCTTCGCTATGAA TGTCCATGTC GAT GACACGGACA TAGCCACCATGTTCG Atu4866 2051328 - 2051089 - | hypothetical protein Atu4867 2052006 - 2051470 - | hypothetical protein Atu4868 2053081 - 2052011 - | putative oxidoreductase TERM 2132 2052356 - 2052374 + g 71 -6.6 -4.25104 | CACACCTTTTCGTGT CGGCGCGA CAT TGGCGTCG TTTTCGTCAGACAGG Atu4869 2053277 - 2053699 + | hypothetical protein Atu4870 2054675 - 2053716 - | NADP-dependent quinone oxidoreductase TERM 2133 2053777 - 2053800 + g 71 -6.6 -4.21194 | opp_overlap 2053765, overlap 2053779 AAATCATGAGCGGCT GCCGCTTCCG AGAG CGGAAACGTC TTTTCGATCATCACA Atu4872 2054871 - 2055770 + | LysR family transcriptional regulator Atu4873 2056469 - 2055897 - | TetR family transcriptional regulator TERM 2134 2056129 - 2056107 - G 73 -10.6 -3.60074 | GAGAAACTGCTGAAA CCGTTCGTAA ACT TGACGAACGG CCGGAAATTGGAAAT Atu4874 2056525 - 2056959 + | hypothetical protein Atu4875 2057365 - 2057766 + | hypothetical protein Atu4876 2057922 - 2058983 + | putative oxidoreductase TERM 2135 2059025 - 2058999 - f 83 -12.3 -3.64703 | opp_overlap 2059004 2059006, overlap 2059002 TTCTGTCGATCCAAA CGAGAGACGCC GAATA GGCGTCTCTTG CACCAAGACAGACAT TERM 2136 2059022 - 2059002 - f 79 -12.6 -2.94144 | opp_overlap 2059004 2059006, overlap 2058999 TGTCGATCCAAACGA GAGACGCC GAATA GGCGTCTC TTGCACCAAGACAGA TERM 2137 2059390 - 2059374 - g 71 -7.2 -4.15044 | opp_overlap 2059382, overlap 2059356 GTTTGCGGCAACAAA CGCAGC TTTCG GCCGCG TTGACATCCTGGTCA Atu4877 2059135 - 2059884 + | short-chain dehydrogenase TERM 2138 2060131 - 2060143 + G 71 -7.7 -4.13767 | overlap 2060137 TATTTCCTGTCAATT TCGAG CCG CTCGA TTTTCAAGTGGAGCG Atu4878 2059926 - 2060339 + | hypothetical protein TERM 2139 2060388 - 2060374 - T 71 -4.2 -4.66938 | overlap 2060369 2060375 ACGCGGAAGAGAAAA GCGG CCCTCTT CCGC GCCGGGACTGGAAGT Atu4879 2061023 - 2060559 - | hypothetical protein Atu8043 2061076 - 2061357 + | hypothetical protein TERM 2140 2061671 - 2061641 - g 85 -16.4 -3.17723 | overlap 2061650 GGATCGGTAATCGAA GCATCGAAAGACAA ACC TTATCTTTCGATGC AACTCGACCTTGACA Atu4880 2061380 - 2062297 + | AraC family transcriptional regulator Atu4881 2062729 - 2062328 - | hypothetical protein Atu4882 2063159 - 2063341 + | hypothetical protein TERM 2141 2063952 - 2063984 + G 79 -9.2 -4.27467 | gap 1, opp_overlap 2063910 ATGCGGCTTGAACGC GACGTCGG-CATCTC GATC GAGATGATCGCCGTC TTTGTTCGCTTCTGG Atu4884 2063733 - 2064176 + | hypothetical protein Atu8201 2064459 - 2064656 + | hypothetical protein Atu8202 2064653 - 2064910 + | hypothetical protein Atu4887 2064949 - 2065299 + | hypothetical protein Atu4888 2065436 - 2065726 + | hypothetical protein Atu4889 2065797 - 2066600 + | hypothetical protein Atu4890 2067421 - 2066597 - | IS426 transposase Atu4891 2067807 - 2067418 - | IS 426 transposase Atu4892 2068075 - 2070168 + | hypothetical protein TERM 2142 2070316 - 2070303 - g 70 -3.1 -4.66987 | gap 1 TACACGGGAATAAAA GC-GGA TTA TCCTGC TGCAGTTTCTAGCGG Atu4893 2070165 - 2070875 + | hypothetical protein TERM 2143 2070903 - 2070881 - f 80 -9.9 -4.0098 | opp_overlap 2070877 GCTTAATTGAAATAA TGCCGCACA GATCG TGTGCAGCA TAAATGGTTAGAGCT TERM 2144 2072093 - 2072062 - g 71 -7.9 -4.0616 | overlap 2072058 GATCTGAACGACAAA CGCGTCTTGCGCC GCATTG GGCGCACAAGGCG ACAGTTGTTTGAAGA tnp 2071162 - 2072664 + | transposase TERM 2145 2072981 - 2072998 + F 70 -9.9 -3.36518 | CGCCGCCCCCCTCGA CCTCAAC TCAA GTTGAGG TTGTACGAATTTTGA Atu4895 2073059 - 2073466 + | hypothetical protein Atu4896 2074105 - 2073557 - | acetyltransferase Atu4897 2074757 - 2074353 - | hypothetical protein Atu4898 2074865 - 2075113 + | hypothetical protein SEQUENCE gi|159186452|ref|NC_003064.2| Agrobacterium tumefaciens str. C58 plasmid At, complete sequence (length 542868) repA 70 - 1377 + | replication protein A repB 1374 - 2405 + | replication protein B TERM 1 2502 - 2461 - f 70 -6.5 -4.12942 | overlap 2467 GGAAAGTGCGCAAAA GAAAAAGGCCCCCGAAACG TTGC CGTCATGGAAGCCCTTCTC GTTGTGTGAGAACTT TERM 2 2496 - 2467 - f 91 -4.1 -5.45802 | overlap 2461 TGCGCAAAAGAAAAA GGCCCCCGAAACG TTGC CGTCATGGAAGCC CTTCTCGTTGTGTGA TERM 3 2792 - 2803 + G 71 -5.8 -4.36914 | CTGGCGGTGCTCGAC GCTC TCCT GAGC TTTTATCCCGAGAAC repC 2606 - 3820 + | replication protein C TERM 4 4125 - 4098 - T 88 -11.3 -4.07568 | opp_overlap 4098 4101, overlap 4101 CGGCGTGCGGTAAAA CAAGCCTGCCG TTAGGT CAGCAGGCTCG TGTTCCGGAGATCTT TERM 5 4122 - 4101 - T 80 -9.4 -4.17048 | opp_overlap 4098 4101, overlap 4098 CGTGCGGTAAAACAA GCCTGCCG TTAGGT CAGCAGGC TCGTGTTCCGGAGAT socD 5280 - 4153 - | fructosyl amino acid oxidase socC 6332 - 5325 - | deoxyfructose oxidoreductase TERM 6 5744 - 5714 - G 76 -9.1 -4.07568 | gap 2 GGTCCGTGCCGAAAA CGGG-A-TCACGCTC CAT GAGCGCGATTGCCCG CAGCGGTTCCGCATC socB 7860 - 6352 - | deoxyfructosyl-amino acid ABC-type membrane transporter TERM 7 7913 - 7882 - R 75 -7.1 -4.41616 | overlap 7883 7884 ATCCCTTGAAAGAAA GGCCGGCCCGACC GGTGGA GGCCGGACCGGAA GGCGGCATCACTGCT TERM 8 7912 - 7883 - R 71 -10.6 -3.24488 | overlap 7882 7884 TCCCTTGAAAGAAAG GCCGGCCCGACC GGTGGA GGCCGGACCGGA AGGCGGCATCACTGC TERM 9 7911 - 7884 - R 81 -14.1 -2.54371 | overlap 7883 7882 CCCTTGAAAGAAAGG CCGGCCCGACC GGTGGA GGCCGGACCGG AAGGCGGCATCACTG socA 8754 - 7921 - | deoxyfructosyl-amino acid transporter periplasmic binding protein TERM 10 8880 - 8912 + H 100 -19.3 -4.09805 | opp_overlap 8901 AGTCTTTTTGTTACT GAGACCGGTCTCAAT GAG AATGAGACCGGTCTC TTTGATTATTGGTAA socR 8980 - 10044 + | santhopine-responsive transcriptional repressor TERM 11 10161 - 10136 - f 100 -6.2 -5.53991 | gap 1 TATCGAGTAAAAAAA TGTCGCCAGGC GGCCG GCCTG-CAACA CGGTTCGCCTTCTAG Atu8044 10306 - 10611 + | hypothetical protein Atu5008 11452 - 10667 - | hypothetical protein TERM 12 12025 - 12008 - H 71 -9.9 -3.53761 | opp_overlap 11997 12008, overlap 11996 12024 CAATGGTTTTCCAAA CCTTGTC AGCT GACAAGG TCTTGGCCCCCAAGT TERM 13 12134 - 12117 - H 83 -9.9 -4.08216 | opp_overlap 12106 12117 CTAGGGTTTTGAAAA CCTTGTC AGCT GACAAGG TTTTCAAGCAATGCG TERM 14 12117 - 12134 + H 83 -9.9 -4.08767 | opp_overlap 12117, overlap 12106 CTAGGGTTTTGAAAA CCTTGTC AGCT GACAAGG TTTTCAAGCAATGCG Atu5010 12517 - 12717 + | hypothetical protein TERM 15 12726 - 12708 - f 77 -8.1 -4.09685 | gap 1 CGCGATCCTGGAAAA GGC-CGCC TGAA GGCGAGCC CGCCGGCTACTCAAG Atu5011 13082 - 13723 + | polyketide biosynthesis dithiol-disulfide isomerase TERM 16 14381 - 14331 - f 95 -12.9 -4.13654 | gap 1, opp_overlap 14338, overlap 14333 14338 14340 GCGCCAAATCAGAAA TACT-AGATAGCCATCAAGATGGC AGAC GCCATCTTGATGGCTATTTCAATT TAAGTTACTGTGGAT TERM 17 14378 - 14333 - f 100 -17.1 -3.66216 | opp_overlap 14338, overlap 14331 14338 14340 GCCAAATCAGAAATA CTAGATAGCCATCAAGATGGC AGAC GCCATCTTGATGGCTATTTCA ATTTAAGTTACTGTG TERM 18 14338 - 14373 + F 100 -23.6 -3.8698 | opp_overlap 14333 14331 14338 14340 ATCAGAAATACTAGA TAGCCATCAAGATGGC AGAC GCCATCTTGATGGCTA TTTCAATTTAAGTTA TERM 19 14373 - 14338 - f 100 -23.6 -3.00121 | opp_overlap 14338, overlap 14333 14331 14340 ATCAGAAATACTAGA TAGCCATCAAGATGGC AGAC GCCATCTTGATGGCTA TTTCAATTTAAGTTA TERM 20 14371 - 14340 - f 100 -21.8 -3.04691 | opp_overlap 14338, overlap 14338 14333 14331 CAGAAATACTAGATA GCCATCAAGATGGC AGAC GCCATCTTGATGGC TATTTCAATTTAAGT Atu5013 14416 - 14664 + | hypothetical protein stbB 14661 - 15074 + | plasmid stabilization protein intX 16129 - 15089 - | phage-related integrase Atu5016 16428 - 17576 + | hypothetical protein Atu5017 18349 - 17669 - | hypothetical protein Atu5018 19208 - 18384 - | hypothetical protein TERM 21 19194 - 19207 + g 70 -3.1 -4.6709 | CTTCGGCGGGACAGG TGCTT TTTC AGGCA TTTTCTCTGCTTTTA Atu5019 20004 - 19234 - | hypothetical protein Atu5020 21335 - 20001 - | hypothetical protein Atu5021 22228 - 21332 - | hypothetical protein TERM 22 22199 - 22212 + g 76 -5.9 -4.62069 | AGGGACGTTCTTTCC CGGGC CAGT GCTCG TTTTTGAAGTGCCCA Atu5022 24126 - 22228 - | hypothetical protein Atu5023 24428 - 26161 + | hypothetical protein TERM 23 26285 - 26252 - g 74 -7.4 -4.4261 | opp_overlap 26255, overlap 26283 GCGGTAAGACGAAAA CGGCTGTGCATCGC GTTGCA GCGATGCAGAATCG ATTGACCGACCGGAT TERM 24 27438 - 27426 - g 70 -3.3 -4.58283 | GAATTTCGTGAAAAA TCCTG CCA CGGGA TTGCCCGCATCGAAT TERM 25 27585 - 27575 - g 81 -8.2 -4.63486 | ACCGCCTTAAGAAAA CGGC GTT GCCG AACGGACCACTGGTT Atu5024 26191 - 27891 + | ATP-dependent DNA helicase tnp 28194 - 27940 - | hypothetical protein Atu5026 28294 - 28704 + | hypothetical protein Atu5027 29379 - 28825 - | IS 426 transposase Atu5028 29753 - 29376 - | IS426 transposase Atu5029 29924 - 30694 + | hypothetical protein Atu5030 30855 - 31397 + | hypothetical protein Atu5031 32576 - 31458 - | hypothetical protein Atu5032 33533 - 32772 - | hypothetical protein TERM 26 32837 - 32847 + g 71 -5.4 -4.35518 | GTTCATACAGCGGTG TCTC ACG GAGA TTTTCGTATAGCGTT Atu5033 34635 - 33565 - | hypothetical protein TERM 27 34300 - 34288 - G 73 -4.8 -4.60889 | AAGTATTCGGAAAAA GTGG CCGAT CCAC GTGTAGTCTGGATTG TERM 28 35368 - 35338 - g 100 -16.3 -4.2349 | gap 1, opp_overlap 35338 35334 35346 TTTGGACATGCAAAA CCCCCGA-AGTTGG GTGT CCAACTTTCGGGGG TCAGTTCATTCGCCA TERM 29 35338 - 35368 + G 78 -16.3 -2.60244 | gap 1, opp_overlap 35338, overlap 35334 35346 TTTGGACATGCAAAA CCCCCGA-AGTTGG GTGT CCAACTTTCGGGGG TCAGTTCATTCGCCA Atu5034 35230 - 35457 + | hypothetical protein Atu5035 35532 - 36428 + | hypothetical protein Atu5036 36479 - 36865 + | hypothetical protein Atu5037 36918 - 37697 + | hypothetical protein TERM 30 37770 - 37750 - f 86 -7.5 -4.71426 | overlap 37753 GCTGGATCAAGAAAA CTAGCCAGT ATC ACCGGCTCG TAACGTGCTACGAGT TERM 31 37937 - 37953 + F 78 -6.5 -4.66057 | GATCTCTGTAGATTG CCATCGA TAT TCGCTGG TTTTGATTTCTCTGT TERM 32 38362 - 38396 + F 81 -13.6 -2.91681 | gap 1, opp_overlap 38364, overlap 38364 TGTATCTGGATACGA G-AGCGCGACGCTGC AAGATC GCCGCGTCGCGCTAC TGTCTGCAATTCAGG TERM 33 38364 - 38393 + F 89 -16.4 -2.70275 | opp_overlap 38364, overlap 38362 TATCTGGATACGAGA GCGCGACGCTGC AAGATC GCCGCGTCGCGC TACTGTCTGCAATTC TERM 34 38393 - 38364 - f 93 -17.1 -2.85668 | opp_overlap 38364 38362 TATCTGGATACGAGA GCGCGACGCTGCA AGAT CGCCGCGTCGCGC TACTGTCTGCAATTC TERM 35 38457 - 38481 + F 78 -12.1 -3.21395 | overlap 38435 38434 38456 38458 TAGTCAGTTCGATTG TCGCCGCGTTT CGT GAACGCGGCGC TCTTCTACCGGCGAT TERM 36 38458 - 38480 + F 85 -15.6 -2.52623 | overlap 38435 38434 38457 38456 AGTCAGTTCGATTGT CGCCGCGTTT CGT GAACGCGGCG CTCTTCTACCGGCGA TERM 37 39431 - 39447 + G 71 -7.3 -4.19483 | opp_overlap 39422, overlap 39422 CACAATGCTGCTGCC GAGACAG GAG CTGTTTC TTTATATGTATGTAA Atu5039 39240 - 40421 + | hypothetical protein Atu5040 41397 - 40495 - | hypothetical protein parB 42281 - 41394 - | plasmid partitioning protein Atu5042 43795 - 42278 - | recombinase TERM 38 43782 - 43796 + g 71 -5.7 -4.31043 | opp_overlap 43781 GACATGCGGACATAC TGTGC CGCAC GCACA TTTTCAGTCTTGTGT Atu5043 43896 - 44303 + | hypothetical protein Atu5044 45479 - 44352 - | hypothetical protein TERM 39 44481 - 44498 + g 80 -3.4 -5.04385 | CATGGCGGACATTCT CTCGTA GTCGGA TGCGAG TTTTTTGCGCATCTC TERM 40 44729 - 44741 + g 73 -4.8 -4.69664 | TGAGCGAAGGGTTAC CGGA CATGC TCCG TTTTTCCGTCATCTC Atu5045 46200 - 45460 - | hypothetical protein Atu5046 46557 - 46904 + | hypothetical protein Atu5047 47141 - 46905 - | hypothetical protein Atu5048 48002 - 47226 - | exodeoxyribonuclease III Atu8099 48190 - 48014 - | hypothetical protein Atu5049 48390 - 49286 + | hypothetical protein TERM 41 50092 - 50079 - g 77 -3.8 -5.0133 | overlap 50080 GATGCTCTGAAAAAA TCGG TCGCCG CCGA GAACCGGTCCAGCAA Atu5050 49299 - 50111 + | hypothetical protein TERM 42 50757 - 50734 - g 70 -10.2 -3.44487 | overlap 50732 CATCATAGCCAAACA CCGGGACAGT CCGT ACCGACCCGG CCGCACCGGCGACTG Atu5051 50108 - 51145 + | ATP-dependent DNA ligase TERM 43 51150 - 51168 + F 85 -2.2 -5.44119 | overlap 51154 AATGGAGTTGATGTA GGCGGCCG TTG CGACTTCC TTTTTTTCCGCTGAC hspAT1 51311 - 51787 + | small heat shock protein TERM 44 51829 - 51806 - f 100 -13.8 -5.03145 | overlap 51807 GAACGTTGGAAAAAA TGGGCGCCGT CGTG ACGGCGCCCG TCGACATTCCGGGTT TERM 45 51828 - 51807 - f 100 -17.3 -3.61164 | overlap 51806 AACGTTGGAAAAAAT GGGCGCCGT CGTG ACGGCGCCC GTCGACATTCCGGGT Atu5053 51860 - 52159 + | hypothetical protein Atu5054 52169 - 52444 + | hypothetical protein Atu5055 55110 - 52456 - | ATP-dependent DNA ligase TERM 46 52588 - 52601 + g 78 -6.7 -4.7078 | overlap 52585 AATGGTGAAGCGTTT CGGAT CGAG ATCCG TTTTTACCTGCTTCC TERM 47 53438 - 53452 + g 100 -12.8 -4.42653 | GGGGTATCAGTCTTT GCCGGC GAT GCCGGC TTTTCTGCCTCGACT TERM 48 55044 - 55058 + g 78 -2.1 -5.03314 | gap 1, overlap 55055 55056 TCAGCTTCGCTGCGC CGCTAG GCTC CT-GCG TTTTTTGAAAATCGC TERM 49 55162 - 55130 - H 71 -11.1 -2.91276 | overlap 55129 GTCCCCGGTACAAAT CCGCCTCCCGCCTCC GAT GAGGGCGGGATGAGG CCCGGCCGGACAGGT Atu5056 55435 - 56250 + | hypothetical protein TERM 50 56380 - 56394 + G 81 -5.7 -4.85599 | opp_overlap 56375 56373 TTCAAAAGCAGGGCG TGTCG CGGCC CGACA TTTTTATACAGTCGG TERM 51 56489 - 56508 + G 73 -10 -3.65351 | TCGCCATGACGGCGC CCTCGATG GTGA CGTCGAGG TTTCGGTCGACATCG Atu5057 56286 - 56594 + | hypothetical protein ugpB 56951 - 58210 + | ABC transporter, substrate binding protein (glycerol-3-phosphate) ugpA 58269 - 59138 + | ABC transporter, membrane spanning protein (glycerol-3-phosphate) TERM 52 59152 - 59179 + G 73 -10.5 -3.65996 | gap 1, overlap 59150 GAGAACCCACTTCTT GCCGGCCTGGCG CTGGT CGCC-GGCCTGC TGTTTCTGTCTCCCG ugpE 59128 - 59937 + | ABC transporter, membrane spanning protein (glycerol-3-phosphate) TERM 53 60286 - 60300 + G 72 -2.1 -4.79657 | overlap 60287 ACCCGGTGTCGATGG TCTTC CGTAT GAAGG TTTTGTTGCTCTTGT TERM 54 60656 - 60611 - g 71 -7.6 -4.04174 | gap 2 TCGCAGATAACCAAA GCGCTGGAC-CTCGG-CGTGAA GGTC TTCACGACCGACCGCCCGACGC TCGCGATCGCTCTCC glpQ 59954 - 60703 + | glycerophosphoryl diester phosphodiesterase ugpC 60700 - 61743 + | ABC transporter, nucleotide binding/ATPase protein (glycerol-3-phosphate) Atu5063 61763 - 62641 + | RpiR family transcriptional regulator Atu5064 63339 - 62887 - | MarR family transcriptional regulator TERM 55 63290 - 63280 - G 70 -3.2 -4.68124 | opp_overlap 63283, overlap 63283 TGAATAGAGAGAAAA GCAC AGC ATGC CGCTCACGTCGGTCA TERM 56 63914 - 63933 + G 80 -3.5 -5.12068 | opp_overlap 63902 63914 63912, overlap 63907 63916 GTATCCGCGAAAACA CCGCGAA GAACCG TTCGCAG TTTTTCTTCGATCTG prxC 63472 - 64293 + | non-heme chloroperoxidase Atu5066 64366 - 65133 + | hypothetical protein TERM 57 65376 - 65359 - T 70 -5.5 -4.49389 | opp_overlap 65359, overlap 65353 AGTGGAGAAGGAAAA TCGCAAG CTCC CGTGCGA TTGCTCCTCGATCCT dapA 66325 - 65432 - | dihydrodipicolinate synthase Atu5068 67967 - 66348 - | ABC transporter, nucleotide binding/ATPase protein (oligopeptide) Atu5069 68907 - 67960 - | ABC transporter, membrane spanning protein (oligopeptide) Atu5070 69836 - 68922 - | ABC transporter, membrane spanning protein (oligopeptide) TERM 58 69465 - 69451 - G 74 -3.5 -4.75372 | overlap 69463 69464 ACCATGGAGGAAAAA CGGTC GAAGA AACCG CCGGTGCGGAACGCG TERM 59 69474 - 69463 - G 71 -7.2 -4.17132 | overlap 69451 69464 AAACGGTCGAAGAAA CCGC CGGT GCGG AACGCGGCGAGCGAA TERM 60 69976 - 70020 + r 95 -8.6 -4.88407 | gap 1, overlap 69978 CTTTTATTGAGGGAG TTCCACCCTGCCCGCAT-GAT CGCG ATCGATCAGGGCAGGGTGGTG TTTTTGATTGCCTAC TERM 61 69978 - 70018 + r 100 -13.4 -4.06004 | gap 1, overlap 69976 TTTATTGAGGGAGTT CCACCCTGCCCGCAT-GAT CGCG ATCGATCAGGGCAGGGTGG TGTTTTTGATTGCCT dppA 71549 - 70032 - | ABC transporter, substrate binding protein (dipeptide) Atu8046 71627 - 71779 + | hypothetical protein Atu5072 71901 - 73091 + | hypothetical protein pdxA 73095 - 74060 + | pyridoxal phosphate biosynthesis protein attL 74057 - 75178 + | iron alcohol dehydrogenase TERM 62 75202 - 75221 + T 100 -11.4 -4.98531 | opp_overlap 75202 AGTACAGCAGGAAAA GGCAGCGC ATAC GTGCTGCC TTTTTAGTTTGAGCG TERM 63 75221 - 75202 - T 84 -9.2 -4.33675 | opp_overlap 75202 AGTACAGCAGGAAAA GGCAGCGC ATAC GTGCTGCC TTTTTAGTTTGAGCG pdhR 75943 - 75239 - | GntR family transcriptional regulator TERM 64 75749 - 75726 - G 93 -11 -4.40358 | ACGGAGCGCACAAAA CTACCCGCGC CACG GCGCGAATAG ATCAGGCCCTGATCC Atu5076 76975 - 75947 - | hypothetical protein TERM 65 76968 - 76978 + g 76 -6.8 -4.50976 | opp_overlap 76967 TCGTCGGCAAGAATG GCCA GCA TGGC TTTTATCCTATGAAG Atu5077 77149 - 77502 + | hypothetical protein Atu8057 78244 - 77915 - | hypothetical protein TERM 66 78461 - 78438 - H 75 -6.1 -4.60797 | opp_overlap 78431 78429 78438, overlap 78433 TCTTGACAGAGAAAA CGTTTTCTC TATTTT GAAAAAACG ATTTCTCACATTGGT TERM 67 79185 - 79235 + G 100 -22.1 -3.14931 | CCCTGCTTCGGCGAC GTGCTGTCCGGCGAGTG-GTCCGAA GCA TTCGGATACGC-CGCCGGACAGCGC TTCGTGGCCAGTCCC TERM 68 79499 - 79484 - g 73 -10.4 -3.67296 | opp_overlap 79497 TATGATCGACGGAAA GCCGGT GGAG ACCGGC CAGCGTCGTCTGCCC Atu5078 78507 - 79568 + | LacI family transcription regulator TERM 69 80274 - 80286 + F 72 -4.1 -4.83169 | ATACGCCGCAGATGC GTGAT GCA ATCGC TTTTTATCAGGGAAT Atu5080 80926 - 81861 + | ABC transporter, membrane spanning protein (sugar) Atu5081 81858 - 82736 + | ABC transporter, membrane spanning protein (sugar) TERM 70 83930 - 83940 + G 71 -5.4 -4.38712 | GTCTTTCCCTTGATG GAAC CCG GTTC TTTTATGACAATCCC Atu5082 82765 - 84528 + | hypothetical protein TERM 71 84540 - 84594 + F 71 -8 -3.85698 | overlap 84531 84537 84537 GTAGAGGCGCTTGGC GGTCTTC-CC-GCGCTTGTCACGACCGG AAT CCG--CGAGACGGGCGCTGGCGAAGATC TTTATACCGCCACGG Atu5083 84749 - 85864 + | ABC transporter, nucleotide binding/ATPase protein (sugar) ttgS 86831 - 85878 - | LysR family transcriptional regulator TERM 72 86024 - 86012 - G 78 -6.9 -4.64861 | CGGGTGGAAAAGAAA GCGCC AAC GGCAC TGGGCTGACCTCAAG TERM 73 87030 - 87040 + G 75 -2.4 -4.91712 | overlap 87036 CCCTATGCCGTTGTT CAGG CAC CCGG TTTTTATCGGTTGAA Atu5085 86925 - 87884 + | metallo-beta-lactamase Atu8047 88262 - 87993 - | hypothetical protein Atu5086 88566 - 90008 + | hypothetical protein Atu5087 90005 - 91057 + | two component sensor kinase Atu5088 91884 - 92117 + | hypothetical protein Atu5089 92148 - 93263 + | hypothetical protein rcdA 95251 - 93278 - | Curdlan synthase rcdB 96448 - 95255 - | Curdlan synthesis protein TERM 74 95315 - 95303 - G 70 -4.8 -4.56597 | overlap 95305 95306 CCGCGTTTCGAAAAA CACC CTGCC GGTG CGCCCTGCGAGGCAC TERM 75 96155 - 96165 + g 85 -3.2 -5.31519 | GAAAGACGTGACGAC GGTT TCG AGCC TTTTTATTTCGGTCT tnpA 98238 - 99791 + | ISL3 family transposase Atu5095 99882 - 100100 + | hypothetical protein Atu5096 101083 - 100310 - | hypothetical protein Atu5097 102191 - 101139 - | ATP-dependent DNA ligase Atu5098 102464 - 103216 + | hypothetical protein Atu5099 103230 - 104648 + | hypothetical protein TERM 76 105569 - 105579 + G 71 -5.4 -4.39828 | opp_overlap 105569 ATCCGCACCATGAAA TACG CCC CGTA TTTTCTGACGGTGTT dnaE 104645 - 107902 + | DNA polymerase III, alpha chain Atu5101 107993 - 108280 + | hypothetical protein TERM 77 108777 - 108724 - f 82 -11.6 -3.85698 | gap 1, opp_overlap 108724 GCCGCTCTCGACAAA GCAGGCACGCGGGCTTCGCAAGGGC TTGTC ACCCCTGCTT-GACCGCCTGCCTGC TTCGCTCGATATGGC TERM 78 108868 - 108855 - f 71 -9.5 -3.60661 | CACCGAAGGACAGAA CGGCC AGGG GGCCG ACACTTCGGCGAAGC Atu5102 108897 - 109496 + | hypothetical protein TERM 79 109507 - 109526 + F 100 -16.4 -4.1822 | opp_overlap 109500 109497, overlap 109523 109525 AATAACATCCATCAC GGCGGGGC TCCG GCCCCGCC TTTGTTCACGTCGAC ardC 109929 - 110861 + | antirestriction protein TERM 80 111121 - 111101 - f 71 -7.5 -4.00868 | opp_overlap 111101 CCATCGAGAAGGAAA GTTCGGCGA CGC TCACCGGAC TTGTCGCATTGGCCC Atu5104 111218 - 111763 + | hypothetical protein TERM 81 111802 - 111769 - T 70 -8.7 -3.73224 | opp_overlap 111775, overlap 111775 CGACGCCTGATCAAA GACGAAGCCCTGCCG GAAA CGGCGGGGCTTTTCC CTTGTTCAAACCAAG TERM 82 111775 - 111796 + T 100 -15.1 -4.36127 | opp_overlap 111769 111775 CTGATCAAAGACGAA GCCCTGCCG GAAA CGGCGGGGC TTTTCCCTTGTTCAA TERM 83 111796 - 111775 - T 85 -12.9 -3.48269 | opp_overlap 111775, overlap 111769 CTGATCAAAGACGAA GCCCTGCCG GAAA CGGCGGGGC TTTTCCCTTGTTCAA Atu5105 112201 - 111764 - | hypothetical protein TERM 84 111821 - 111843 + g 71 -9.1 -3.84406 | opp_overlap 111820 111817 111821, overlap 111824 111835 GTTCAAACCAAGAAG GAACCGGGC ATCTA GCCCGCTTC TTCTTCTGGTCGCGA hupX 112624 - 112394 - | DNA binding protein Atu5107 113017 - 112706 - | hypothetical protein traG 115457 - 113538 - | conjugal transfer protein TERM 85 113733 - 113745 + g 73 -4.7 -4.72272 | GATGTTTTCTGATTT CCGCG ATG CGCTG TTTTTCGTACCCCAG traD 115687 - 115454 - | conjugal transfer protein TERM 86 115620 - 115599 - G 71 -8.7 -3.84246 | gap 1, overlap 115582 CCGCCAAGCAGGAAA GCCCGATCGG CGT CCGA-CAGGC CCGCGCGAACGACAA traC 115964 - 115677 - | conjugal transfer protein TERM 87 117342 - 117331 - g 71 -7.2 -4.15657 | TCAGAACCATAGAAA CCGG CAAT CCGG AAAATCCGTTCACGC TERM 88 117749 - 117761 + G 73 -10.5 -3.56594 | overlap 117757 GCTTCAGCCGATCCA GGCCG GCG CGGCC TTTCGGGCAATTTCC TERM 89 119741 - 119772 + G 89 -6.5 -5.06414 | gap 1, opp_overlap 119741, overlap 119743 CAAGGATGCCTACAA GACGG-CCTTCGCC TACGC GGCGGAGGATCGCC TTTTTGTTCAAGAGG TERM 90 120549 - 120527 - g 70 -3.4 -4.66002 | overlap 120528 GATGAAGAAAAAGAA CGGCAG GCTCGACGTCG CTGCCG GCTCGCTCGATCCCG traA 116187 - 120815 + | conjugal transfer protein Atu5112 121018 - 122340 + | hypothetical protein Atu5113 122358 - 122636 + | transcriptional regulator Atu5114 123026 - 122694 - | hypothetical protein TERM 91 122967 - 122979 + g 74 -5.5 -4.56597 | opp_overlap 122967 TGACCTTGCCATCAA TGTCG TAG CGGCA TTTTTCGGAAAGCCC Atu5115 123296 - 123030 - | hypothetical protein rctB 123649 - 123338 - | transcriptional regulator protein TERM 92 123799 - 123787 - R 84 -9.1 -4.27617 | GATACTGCACGAAAA CGTCG ATC CGACG CAACAGACGGTCAAA Atu5117 124902 - 123961 - | hypothetical protein TERM 93 124541 - 124526 - G 73 -4.6 -4.65263 | ATGTCGGAAAAGAAA TGCTGG CTCT CCTGCA AAGATGTGTTCACTT Atu5118 126306 - 125065 - | hypothetical protein TERM 94 126439 - 126426 - R 74 -9.5 -3.64915 | CGTCATAAACCAGAA CGGCG CTTA CGCCG GCTGCGCGGCTACAT TERM 95 126445 - 126469 + r 78 -12.1 -3.26947 | overlap 126466 GCTTACGCCGGCTGC GCGGCTACATC GAT GGCGTAGCCGC TTGATCTCGCGGTTC Atu5119 127157 - 126432 - | two component response regulator TERM 96 126850 - 126826 - G 76 -14.3 -2.57132 | opp_overlap 126817, overlap 126825 TGTGGCGGCCAGAAT GGGCGGATCAG GCA CTGATCCGCGC CTGCACGCATGAGTT Atu5120 127478 - 127693 + | hypothetical protein Atu5121 128386 - 127712 - | two component response regulator fabG 129204 - 128425 - | 3-ketoacyl-(acyl-carrier-protein) reductase TERM 97 128678 - 128697 + g 71 -6.3 -4.3129 | opp_overlap 128660, overlap 128667 CTGACGAGCGCACGG GCCAGGC CAGCGA GCCCGGC TTTTGATGCTGCATA TERM 98 129063 - 129080 + g 95 -14.1 -4.12532 | opp_overlap 129058, overlap 129074 CCTCGAAGGACGAGC GCGCGGC CTTC GCCGCGC TTTCTGTCTGCCCAA atrC 130916 - 129201 - | acetolactate synthase catalytic subunit TERM 99 129714 - 129726 + g 75 -7.7 -4.28548 | opp_overlap 129704, overlap 129713 ATAACTAGCGTCCGC CACCA CTG TGGTG TTTTCATCGATAACT atrB 132250 - 130916 - | glutamate-1-semialdehyde aminotransferase atrA 133054 - 132365 - | GntR family transcriptional regulator TERM 100 132685 - 132703 + g 74 -3.1 -4.84918 | opp_overlap 132685 AATTCTCGTTTATAA CTCTTTG TATAT CAATGAG TTTTCTATTTGTCGC TERM 101 134155 - 134145 - g 88 -6.8 -5.00884 | overlap 134131 ATCGCCTTGAAAAAA CGAG GTC CTCG AGGTTTTGGGGCAAT attA1 133260 - 134372 + | ABC transporter, nucleotide binding/ATPase protein(putrescine) attA2 134369 - 135271 + | ABC transporter, membrane spanning protein (mannopine) attB 135261 - 136118 + | ABC transporter, membrane spanning protein (mannopine) attC 136146 - 137228 + | ABC transporter, substrate binding protein (mannopine) TERM 102 137355 - 137365 + GF 85 -6.8 -4.77173 | GCAAGAGCGGGTTCA GACG TCG CGTC TTTCTTTTATGCAGA attD 137164 - 137454 + | attachment protein TERM 103 138090 - 138078 - g 81 -4.8 -5.00616 | opp_overlap 138089 CGGTCTGGGAAAAAA GCCT GGTCG AGGC GCTCGGGATCGGAGA attE 137579 - 138373 + | ABC transporter, nucleotide binding/ATPase protein TERM 104 138559 - 138543 - g 76 -8.7 -4.07568 | GGTCCTGGCGCAAAA CCAGCTG GAT CAACTGG TGGCAAAGGACGGCG attF 138370 - 139632 + | ABC transporter, membrane spanning protein att 139629 - 140777 + | hypothetical protein TERM 105 140996 - 141010 + G 84 -5.6 -4.93365 | overlap 140998 ATGGACAGCGCATGG GCGTCC AAT GGACAC TTTTTCGTTCTGCGC attH 140767 - 141834 + | hypothetical protein TERM 106 142205 - 142219 + T 95 -2.8 -5.88565 | opp_overlap 142207, overlap 142207 TCACTTGGTGCTCAA CACATC AGC GATGTA TTTTTTTGTTCTCGA TERM 107 142207 - 142217 + T 73 -5.4 -4.57921 | opp_overlap 142207, overlap 142205 ACTTGGTGCTCAACA CATC AGC GATG TATTTTTTTGTTCTC blcR 143179 - 142352 - | transcriptional repressor of the blcABC operon blcA 143235 - 144689 + | NAD-dependent succinyl-semialdehyde dehydrogenase blcB 144710 - 145870 + | gamma hydroxybutyrate dehydrogenase blcC 145937 - 146707 + | Zn-dependent gamma butyryl lactone lactonase TERM 108 146735 - 146762 + T 100 -12 -4.95155 | opp_overlap 146736, overlap 146736 AGTCAACGGCCAGAT ACGGCGAGGTTG CATG CAATCTCGCCGA TTTTTATCATATGAG TERM 109 146761 - 146736 - T 81 -13.3 -2.89742 | opp_overlap 146735 146736 GTCAACGGCCAGATA CGGCGAGGTTG CATG CAATCTCGCCG ATTTTTATCATATGA TERM 110 146736 - 146761 + T 100 -15.5 -3.5637 | opp_overlap 146736, overlap 146735 GTCAACGGCCAGATA CGGCGAGGTTG CATG CAATCTCGCCG ATTTTTATCATATGA Atu5140 147758 - 147042 - | hypothetical protein attO 147842 - 148606 + | AraC family transcriptional regulator attP 148631 - 149011 + | hypothetical protein TERM 111 149519 - 149536 + G 95 -12.7 -4.15044 | CAATCCATCCTATCA CCCTGCC TGAC GGCAGGG TTTATTCGGACACGG attR 149290 - 150114 + | transacetylase attS 150245 - 151000 + | putative peptidase attT 151528 - 151070 - | acetyltransferase TERM 112 151127 - 151138 + g 72 -3 -4.75404 | TCGCGGAGCAGTTTC TTTG AAGC CAAA TTTTTCGTAGAGTTT attU 151765 - 151568 - | hypothetical protein TERM 113 151825 - 151808 - H 70 -5.5 -4.38712 | CCTATCGGCACAAAA GTTACCC TCAC GGGTGAC GATGGCGGCAGTGAA attV 151827 - 152411 + | Mg(2+) transport ATPase attW 152899 - 152495 - | hypothetical protein attX 153662 - 153120 - | acetyltransferase TERM 114 153395 - 153385 - G 74 -3.2 -4.77165 | CGCGCGATAAGAAAA CCGA CGA TCAG TGTGTTCTCAACGGC attY 154374 - 153739 - | glutathione S-transferase TERM 115 153959 - 153944 - G 78 -2.5 -5.14563 | overlap 153945 TCGCCCATCAAAAAA CGCTG CGATGC CAGCA AATTGTCGATCCATG attZ 154556 - 154840 + | transcriptional regulator Atu5152 155309 - 154902 - | hypothetical protein TERM 116 155387 - 155370 - H 70 -9.9 -3.36518 | TTAAAATTCGTACAA CCTCAAC TAGA GTTGAGG TCAAGGGGCAATGGC atsB 156102 - 156536 + | MarR family transcriptional regulator TERM 117 156760 - 156746 - g 70 -4.2 -4.57474 | CGAACTGAGAGAAAA CGGG GTTGACG CCCG TGCAGTGCAACTCGA atsC 156591 - 157337 + | short chain dehydrogenase dehydrogenases atsD 157887 - 157558 - | hypothetical protein TERM 118 157711 - 157722 + g 81 -5.8 -4.86033 | TCGAGCAAAAGGTTT CGCA TCAC TGCG TTTTTCTCGAAGTTT Atu5158 158410 - 158066 - | hypothetical protein TERM 119 158613 - 158603 - R 72 -2.4 -4.89009 | opp_overlap 158603 AGACGTAAGCAAAAA GTCG TGG CGTC GTTCTTGTCAGGGAC TERM 120 158718 - 158699 - R 100 -12.1 -4.86621 | AGCGCCAAGCAAAAA CCCCGCC GGGGAT GGCGGGG CCGATAACGCCGTTT atsE 159149 - 158745 - | hypothetical protein rctA 159872 - 159510 - | transcriptional regulator protein Atu5161 159966 - 160505 + | hypothetical protein avhB1 160508 - 161194 + | type IV secretion protein AvhB1 avhB2 161191 - 161490 + | type IV secretion protein AvhB2 avhB3 161493 - 161834 + | type IV secretion protein AvhB3 TERM 121 162341 - 162361 + G 74 -7.5 -4.40003 | overlap 162335 TAATGGCGGGCTTGA GGAGCTTTG AGC CACGGCTCC TTTCTCTTTATGAAC avhB4 161935 - 164208 + | type IV secretion protein AvhB4 avhB5 164208 - 164906 + | type IV secretion protein AvhB5 TERM 122 165649 - 165669 + G 71 -5.3 -4.43309 | GGTTGGCGCTGGCGA TCGTCCTGG CGA TCGGGCCGA TTTTCATTGCGCTTG avhB6 165141 - 166076 + | type IV secretion protein AvhB6 avhB7 166112 - 166378 + | type IV secretion protein AvhB7 avhB8 166382 - 167053 + | type IV secretion protein AvhB8 avhB9 167053 - 167904 + | type IV secretion protein AvhB9 avhB10 167919 - 169091 + | type IV secretion protein AvhB10 avhB11 169100 - 170110 + | type IV secretion protein AvhB11 Atu5173 170162 - 170551 + | dehydrogenase Atu8203 171061 - 171345 + | hypothetical protein TERM 123 171481 - 171498 + F 71 -6.3 -4.3467 | gap 1, opp_overlap 171470 171469, overlap 171483 GAACGTCGAGTTTAT CT-CGACC AAG GGTCGTAG TTTTGCTGTAAGGAT basR 171553 - 172227 + | two component response regulator TERM 124 172907 - 172948 + G 100 -18.1 -3.71848 | opp_overlap 172906 172905 172903 CGCGACATCAACAGG GCGCTGCGTCGTCTCGA TAATGGCT TCGAGGCGACGGAGCGC TTCTTCGTCAACGCG basS 172229 - 173578 + | two component sensor kinase TERM 125 174773 - 174801 + G 83 -16.7 -2.62616 | ATTGTTCTCAGCCGC GTCAGCGGCGCCG TGC TGGCGCCGCTGAG TGCTGTGGAGGGTGC Atu5177 173825 - 175018 + | efflux protein TERM 126 175051 - 175068 + G 71 -8.3 -4.07568 | overlap 175052 ACCACTGATACGCGT ACGCGGG GTAT CCCGCGC TTTTCCCGCAGGCGA TERM 127 175133 - 175108 - g 76 -12.5 -3.34398 | overlap 175106 GCGCGTGCTGAAAGA CGTCGACCTCG ACAT CGAGGCCGGCG AGATGATGGCCATCA Atu5178 175028 - 176974 + | ABC transporter, nucleotide binding/ATPase protein Atu5179 177272 - 177562 + | hypothetical protein Atu5181 178937 - 178200 - | short chain dehydrogenase TERM 128 178999 - 179021 + r 74 -6.9 -4.25859 | opp_overlap 178970, overlap 179000 CCTTGCGGCGGGCGT CCGTGCGGC CTGCA GCCGTACGA TTATTTTCGGTTCAA qor 179968 - 179033 - | quinone oxidoreductase Atu5183 180650 - 180054 - | hypothetical protein Atu5184 180842 - 181771 + | LysR family transcriptional regulator TERM 129 182136 - 182123 - g 85 -3.7 -5.36441 | overlap 182124 182125 TCGCCATAGAAAAAA CGGGC GCGC GCGCG CTGGCTATTGCCGCG Atu5185 181939 - 182703 + | short chain dehydrogenase TERM 130 182850 - 182839 - g 70 -4.4 -4.49314 | CACGATCAAAAACAA GAAG TCGC CTTC GGCCGGTTCACCGTT Atu5186 182684 - 182869 + | hypothetical protein Atu5187 183902 - 182976 - | LysR family transcriptional regulator TERM 131 183374 - 183319 - G 81 -13.2 -3.39772 | gap 1, opp_overlap 183362, overlap 183317 183320 CGAAATGTCCAAAGA TCCAGCGCG-CCGACGACAAGGCAG GTATGTT CCGCCAGGTCGTCGGGCGTGCTGGG CCGGCCGTGTTTTTC TERM 132 183373 - 183320 - G 83 -16.7 -2.63381 | gap 1, opp_overlap 183362, overlap 183319 183317 GAAATGTCCAAAGAT CCAGCGCG-CCGACGACAAGGCAG GTATGTT CCGCCAGGTCGTCGGGCGTGCTGG GCCGGCCGTGTTTTT TERM 133 184650 - 184633 - g 76 -5.5 -4.63218 | CGTCCGTGAAGAAAA CTTCGAG TTTG CGCGAAG TGTCGGAGCTGACGT Atu5188 184097 - 185083 + | zinc-binding dehydrogenase Atu5189 185080 - 185412 + | hypothetical protein Atu5190 185527 - 186249 + | hypothetical protein TERM 134 186397 - 186353 - f 80 -9.9 -4.05788 | overlap 186356 TGTCCGGAAACGAAA CCATGTGACGCAGCACGGCGA GCA TTGCCGGGCTGCACCAGACAG GAGCACGCCTACATG Atu5191 186410 - 187534 + | hypothetical protein Atu5192 188209 - 187904 - | hypothetical protein Atu5193 188429 - 190330 + | peptidase TERM 135 191057 - 191038 - g 76 -10 -3.84271 | opp_overlap 191047 191049, overlap 191048 GGAGAATACGAACAA CCAGCAGA AGCG CCTGCTGG TGGAGATCAACAGCG Atu5194 190343 - 191092 + | MerR family transcriptional regulator TERM 136 191249 - 191218 - f 81 -13.2 -2.90763 | opp_overlap 191213 GCCATATTCTATACA CTTGGTTATGACTG GATT CAGTTATAACCAAG AGCAATATCATGGAT TERM 137 192047 - 192064 + G 72 -2.6 -4.81852 | GCTTCCCGAGTATTG GCTGCG ATCTAC CGAAGC TTTTCTTGCTTATCC Atu5195 191259 - 192176 + | LysR family transcriptional regulator Atu5196 192301 - 193017 + | hypothetical protein Atu5197 194055 - 193078 - | LysR family transcriptional regulator Atu5198 195102 - 194086 - | putative oxidoreductase TERM 138 194248 - 194260 + g 82 -9.1 -4.4078 | CGCACCGATGATGAC GGTCG AGA CGACC TTTTGCTTCAGCAGC TERM 139 194525 - 194493 - G 72 -14.2 -2.66316 | gap 1, opp_overlap 194489 194517, overlap 194477 194490 GTTCCGATGAGAGCA GCGGGC-CGATCTCG CGCT CGAGATCGCGCCCGA CAAGCGTGTAGTATG Atu5199 196332 - 195232 - | oxidoreductase Atu5200 198057 - 196699 - | efflux protein TERM 140 197251 - 197222 - G 71 -7.1 -4.24726 | gap 1, overlap 197214 ATAAGAATTGCAAAA GCAAGGCGGGCGAT ATC ATCGCTC-CCTAGC CAGCGCAGGTTGAGG TERM 141 197700 - 197678 - G 71 -5.5 -4.33819 | gap 1, overlap 197683 ATCACGTAGAACAAA GACAACGGCG TTAG CGCCGCCG-C AACAAAGCCGCTTGC TERM 142 197696 - 197683 - G 76 -9.5 -4.00122 | overlap 197678 GTAGAACAAAGACAA CGGCG TTAG CGCCG CCGCAACAAAGCCGC TERM 143 198118 - 198103 - H 78 -2.4 -5.14563 | TTCCTCACGAAAAAA GCTACG AACC CGCTGC GTCAGTCTCATCATC pirA 198330 - 199184 + | pirin-like protein Atu5202 199446 - 200564 + | alcohol dehydrogenase Atu5203 200613 - 201692 + | beta-lactamase TERM 144 202883 - 202901 + G 80 -3.9 -5.12617 | gap 1, opp_overlap 202883, overlap 202873 202885 GTCCCGTGCCAGAAG GC-CCTTT GGCA AAAGGTGC TTTTTTCCGTCCTTC gbsA 201811 - 203265 + | aldehyde dehydrogenase Atu5205 203504 - 204022 + | hypothetical protein Atu5206 205196 - 204297 - | LysR family transcriptional regulator TERM 145 205690 - 205674 - g 73 -4.3 -4.58395 | TTCACTTGGCAAAAA CATCGTG CTT CCCGACG AGGAGATCGATGCAC TERM 146 205872 - 205897 + G 77 -3.3 -4.89477 | gap 1, overlap 205884 CTTTAGAAAGATCGA CAGCTTC-GC AGCTGGA GCAGGAGCTG TTTTATTCTTCGAGG Atu5207 205381 - 206214 + | hypothetical protein Atu5208 207277 - 206378 - | LysR family transcriptional regulator TERM 147 207670 - 207628 - g 74 -3.9 -4.78107 | opp_overlap 207669, overlap 207636 207645 CATGACCACCAAAAA CGGGAAAACCCAGGTAACG GCCCA CGCCGCCGGCGACTTCCCG GGCAGCCCCATTGAT Atu5209 207416 - 207745 + | hypothetical protein Atu5210 207742 - 208521 + | short chain dehydrogenase Atu5211 209014 - 208547 - | MarR family transcriptional regulator Atu5212 209267 - 209956 + | hypothetical protein TERM 148 210012 - 209954 - T 76 -9 -3.96447 | opp_overlap 209958, overlap 209957 TCAGCAAAAAAGCAA TGATCGACGTC-GCGCCATCGGGACGGT TGATG ACCCTCCCGATGGCGCCGACAA-AATTA ACTTAAAGGCTCGGC TERM 149 210007 - 209957 - T 84 -13.4 -3.0166 | gap 2, opp_overlap 209958, overlap 209954 GCAAAAAAGCAATGA TCGACGTCGCGCCATCGGGACGGT TGATG ACCCTCCCGATGGCGC--CGACAA AATTAACTTAAAGGC Atu5213 211449 - 210448 - | zinc-binding dehydrogenase TERM 150 211472 - 211492 + r 95 -14.7 -3.44686 | opp_overlap 211469, overlap 211470 TCTCCATTAAGAGGT GGAGCGGCT GTC GGCCGCTCC TGTTATTGGGTTAGA Atu5214 212258 - 211503 - | dehydrogenase Atu5215 213367 - 212426 - | LysR family transcriptional regulator Atu5216 213526 - 213750 + | hypothetical protein Atu5217 213762 - 213995 + | hypothetical protein proV 214326 - 215417 + | ABC transporter, nucleotide binding/ATPase protein (glycine betaine/L-proline) proW 215410 - 216333 + | ABC transporter, membrane spanning protein (glycine betaine/L-proline) TERM 151 216690 - 216708 + G 70 -4.5 -4.57073 | opp_overlap 216701, overlap 216693 CAAAGTTAAGCTCAG CACGGTC AACAC GACCTTG TTTTTCCAGGCCGTG proX 216481 - 217518 + | glycine betaine transporter periplasmic subunit TERM 152 217554 - 217581 + F 100 -13.4 -5.17507 | opp_overlap 217547 217554 217555, overlap 217555 TATACCAAGTATGAA TGGCGGAGGTGC GCCG GAACCTCCGCCG TTTTTCTTGAGTTTT TERM 153 217581 - 217554 - f 74 -11.2 -3.2981 | opp_overlap 217554 217555, overlap 217547 217555 TATACCAAGTATGAA TGGCGGAGGTGC GCCG GAACCTCCGCCG TTTTTCTTGAGTTTT TERM 154 217555 - 217580 + F 95 -14.7 -3.68064 | opp_overlap 217554 217547 217555, overlap 217554 ATACCAAGTATGAAT GGCGGAGGTGC GCCG GAACCTCCGCC GTTTTTCTTGAGTTT TERM 155 217580 - 217555 - f 83 -14.7 -2.57404 | opp_overlap 217555 217554, overlap 217554 217547 ATACCAAGTATGAAT GGCGGAGGTGC GCCG GAACCTCCGCC GTTTTTCTTGAGTTT TERM 156 217941 - 217931 - g 74 -6.8 -4.41047 | overlap 217933 ATCTCGTAACGAAAA GACG GAT CGTC CATCCGCTGCATCAT Atu5221 217638 - 217994 + | hypothetical protein TERM 157 218066 - 218047 - T 100 -15 -4.35116 | GAGTTGACATCAAAA GTGCGGGC TTTC GCCCGCAC CGGAAATCCAGCTTT Atu5222 219201 - 218275 - | 2-hydroxyacid dehydrogenase TERM 158 218810 - 218795 - G 77 -8.2 -4.36914 | overlap 218796 CCGGCGCCCAGAAAA CCCACC CGCA GGCGGG AGGACGGATGAAAAC TERM 159 218888 - 218876 - G 74 -5.5 -4.49939 | ACATAATCCAGAAAA TGCCG GTG CAGCA GCATGACGGAAAGCG TERM 160 219222 - 219250 + r 86 -14.5 -2.87132 | overlap 219208 219225 GGGCCTTGAGGCTGT CTCGCCGACCCCT TCA AGGGGCCGGCTAG TATGTCGCAGGGACG TERM 161 219225 - 219247 + r 83 -14.8 -2.69151 | overlap 219222 219208 CCTTGAGGCTGTCTC GCCGACCCCT TCA AGGGGCCGGC TAGTATGTCGCAGGG TERM 162 219287 - 219307 + r 84 -8.9 -4.23615 | opp_overlap 219279 GAGATCAGGATGCCT TGGCGGCGG CAT CCTTCGCCA TTTCTTCCATGTCCT Atu5223 219884 - 219276 - | hypothetical protein TERM 163 219543 - 219525 - G 76 -5.9 -4.70879 | GGTAAAGCTCAAAAA GGCCGTG CCATT CACCGCC TCGCGGAACATGTTG Atu5224 220260 - 219946 - | hypothetical protein Atu5225 220646 - 220257 - | 4-carboxymuconolactone decarboxylase TERM 164 220543 - 220563 + g 82 -9 -4.36914 | gap 1, opp_overlap 220543 AGAATGTCCTGGAAA GGCCG-CGA GAAG TCGTCGGCC TTTTCTAGCGCGCGG pca 221451 - 220639 - | 3-oxoadipate enol-lactone hydrolase/4-carboxymuconolactone decarboxylase TERM 165 221043 - 221059 + g 71 -5.7 -4.34345 | TCAATGCCGCAAGAC GGCCTGC CAC GCGGTCC TTTTCCTCCTGTGTG TERM 166 221404 - 221427 + g 82 -12.5 -3.60792 | TTCGCCATCGAGCCG GTAGGCGAG TTGCAC CTCGCCTAC TTTCAAAGTTCCAAC Atu5227 222530 - 221454 - | flavin-dependent oxidoreductase dhaS 224072 - 222561 - | aldehyde dehydrogenase ntaB 225065 - 224094 - | nitrilotriacetate monooxygenase component B Atu8059 225600 - 225295 - | hypothetical protein Atu5230 225619 - 227424 + | hypothetical protein Atu5231 227586 - 228488 + | acetyltransferase Atu5232 229163 - 228771 - | translation initiation inhibitor dsd 229296 - 230567 + | D-serine deaminase TERM 167 230934 - 230955 + G 70 -10.1 -3.54424 | overlap 230935 230947 TTCCGCCGAGCCAGA TCGAGGCGG GCGT CTGCCTCGG TTTAACCCGCTGGCA Atu5234 230576 - 231244 + | ABC transporter, membrane spanning protein (amino acid) Atu5235 231254 - 231904 + | ABC transporter, membrane spanning protein (amino acid) TERM 168 232202 - 232187 - g 75 -2.4 -4.88736 | overlap 232189 GACGATCGAGAAAAA CGTCAC GCTT GCGCCG GTCCTGACTGGAAGG Atu5236 231891 - 232622 + | ABC transporter, nucleotide binding/ATPase protein (amino acid) TERM 169 232686 - 232708 + G 72 -11.2 -3.38046 | overlap 232684 232701 TTCAAGCGCATTATC GCTGCGGCCA CCA TTGCCGCGGC TCTTTCCGCTCCGGC Atu5237 232662 - 233441 + | ABC transporter, substrate binding protein (amino acid) TERM 170 233480 - 233453 - f 87 -8.2 -4.65916 | overlap 233454 GTGATCTGAATAAAA CCGGGGCTCGCC GGAA GGCGGGTCCCGC CCAGAATTGAGATTT TERM 171 233479 - 233454 - f 80 -11.7 -3.39068 | overlap 233453 TGATCTGAATAAAAC CGGGGCTCGCC GGAA GGCGGGTCCCG CCCAGAATTGAGATT Atu5238 233536 - 234543 + | hypothetical protein TERM 172 235102 - 235085 - g 70 -4.1 -4.68103 | overlap 235086 235087 CGAACTCGAACAAAA CCGCGAA ACAC TTCGCAA CCTCGGTATTCCGAT Atu5239 234570 - 235679 + | LacI family transcription regulator Atu8048 236096 - 236206 + | hypothetical protein adhP 237287 - 236265 - | alcohol dehydrogenase Atu5241 237445 - 238386 + | LysR family transcriptional regulator Atu5242 239824 - 238670 - | aminopeptidase Atu5243 240614 - 239853 - | DeoR family transcriptional regulator TERM 173 240174 - 240135 - G 78 -14.2 -3.23598 | gap 1 GAAGGAATTGAGGAA CGACACCGCGTGCGC-ACC GAC GGTCGCGCCCTCGGTGGCG TGATAATCGCCGGGA Atu5244 241105 - 240611 - | hypothetical protein Atu5245 241803 - 241102 - | amidase related to nicotinamidase potC 242620 - 241814 - | ABC transporter, membrane spanning protein (spermidine/putrescine) potB 243520 - 242624 - | ABC transporter, membrane spanning protein (spermidine/putrescine) potA 244652 - 243522 - | ABC transporter, nucleotide binding/ATPase protein (spermidine/putrescine) TERM 174 243891 - 243879 - G 84 -5.5 -5.0133 | opp_overlap 243881, overlap 243881 GACCTCGCCAAAAAA CTCCG CGA CGAAG CGCGTTGCCGGCTTG TERM 175 244143 - 244157 + g 74 -5.6 -4.56597 | opp_overlap 244134 244135, overlap 244136 244145 GGCAAAGGCGCGAGC GAGCGC CAC GCGCTG TTTTTCGCCGCCGGA potD 245821 - 244682 - | ABC transporter, substrate binding protein (spermidine/putrescine) TERM 176 246776 - 246794 + G 85 -5.9 -5.08824 | overlap 246779 GGGTATGCCGGCGGA CATCGCG AACGC CGCGCTG TTTTTTGCATCGGAG fabG 246126 - 246899 + | 3-ketoacyl-(acyl-carrier-protein) reductase TERM 177 246911 - 246933 + T 100 -16.3 -3.07622 | opp_overlap 246911 CTGAAATTGAAAGAA GCCGGGCGA CATCA TCGCCCGGC TTGCCTGCAATGTCT TERM 178 246933 - 246911 - T 100 -17 -4.05026 | opp_overlap 246911 CTGAAATTGAAAGAA GCCGGGCGAC ATC ATCGCCCGGC TTGCCTGCAATGTCT Atu5251 248286 - 246949 - | pyridoxal phosphate aminotransferase Atu5252 249286 - 248297 - | hypothetical protein TERM 179 249350 - 249335 - H 84 -3.3 -5.35721 | opp_overlap 249335, overlap 249323 ATACAACAATAAAAA TGTTG GAAATG CAACA TTAATCGCAAGCACT TERM 180 251065 - 251081 + G 74 -3.5 -4.77567 | overlap 251066 CCGCCTCCGGTCAGT GGCTCCC CAA GGGTGCG TTTTCTTATACGCCT Atu5253 250092 - 251651 + | ABC transporter, substrate binding protein (oligopeptide) Atu5254 251830 - 252774 + | ABC transporter, membrane spanning protein (oligopeptide) TERM 181 253249 - 253259 + G 73 -4.6 -4.6902 | CCTTGGTAAGAGCGT CGGC AAT GTCG TTTTTGCCATTGTCC Atu5255 252788 - 253675 + | ABC transporter, membrane spanning protein (oligopeptide) Atu5256 253672 - 254646 + | ABC transporter, nucleotide binding/ATPase protein (oligopeptide) Atu5257 254643 - 255632 + | ABC transporter, nucleotide binding/ATPase protein (oligopeptide) Atu5258 255668 - 256747 + | hypothetical protein Atu5259 257708 - 256758 - | LysR family transcriptional regulator TERM 182 257001 - 256987 - G 89 -10 -4.56775 | ACGGCTGCGGAAAAA TGCGGT ACG ACCGCA ACAACGCGCCGCTCC TERM 183 257796 - 257780 - R 100 -7.9 -5.23292 | CTAGATAAAATAAAA GCTTGCC GCT GGCGAGC AATCGTGCTGTCTCG TERM 184 257878 - 257897 + r 70 -9.2 -3.7511 | GAGAGATGCGGGCGA GCCCGGGT GCCG AACCGGGC TTATGTTCTGGCGGC Atu5260 259019 - 257898 - | amide hydrolase Atu5261 260716 - 259067 - | tannase TERM 185 259094 - 259117 + g 76 -6.6 -4.45168 | opp_overlap 259099, overlap 259095 GCAGCTGAAGCTTGA AGCGATTGCG ACGT CGCCATCGCC TTTATATTTTGGCCA TERM 186 260448 - 260465 + g 71 -6.3 -4.42062 | gap 1 CAGATGATGTCCGGG GCCT-TCG GAT CGACAGGC TTTATTTGCCCGATA Atu5262 260901 - 261128 + | hypothetical protein Atu5263 262268 - 261387 - | ABC transporter, membrane spanning protein (sugar) TERM 187 262014 - 261999 - G 73 -9 -3.88559 | overlap 262002 AAGCAGGGCGAGAAA CACGGT AACG ACCGTG ACCAGAACCGAATTG Atu5264 263353 - 262265 - | ABC transporter, membrane spanning protein (sugar) TERM 188 262908 - 262880 - G 71 -7.3 -4.20749 | overlap 262882 262902 CAACAGGGCAAGAAA TAGCGCCAGTGCA GCC TGAACAGGCGCGA CGACGACCACGAAGG TERM 189 262906 - 262882 - G 73 -9.9 -3.69469 | overlap 262880 262902 ACAGGGCAAGAAATA GCGCCAGTGCA GCC TGAACAGGCGC GACGACGACCACGAA Atu5265 264634 - 263366 - | sugar binding protein TERM 190 266405 - 266432 + G 70 -10.6 -3.53444 | overlap 266406 GGGCGGTCCTGCCCA TGACGGCCATGA AGGA TCATGGCCCTCG TTTGCAGGAGGCTGC Atu5266 265057 - 266454 + | two component sensor kinase TERM 191 266953 - 266941 - g 70 -3.3 -4.62069 | opp_overlap 266941, overlap 266945 TTGCCAGGGGAAAAA GCAAC CGC GATGC TGCTCTGGCCCTCGA Atu5267 266451 - 267083 + | two component response regulator TERM 192 267135 - 267094 - T 100 -21.7 -4.90778 | opp_overlap 267100, overlap 267096 CGTAGCCAAATAAAA GAGCAAGGCCCCGCAAATG TTGC CATCCGCGGGGCCTTGCTG TAGGTCACTCCGTCT TERM 193 267133 - 267096 - T 100 -24.3 -4.07285 | opp_overlap 267100, overlap 267094 TAGCCAAATAAAAGA GCAAGGCCCCGCAAATG TTGC CATCCGCGGGGCCTTGC TGTAGGTCACTCCGT TERM 194 267100 - 267129 + T 87 -13.5 -3.28119 | opp_overlap 267096 267094 CAAATAAAAGAGCAA GGCCCCGCAAATG TTGC CATCCGCGGGGCC TTGCTGTAGGTCACT dctP 268262 - 267150 - | ABC transporter, substrate binding protein Atu5269 269797 - 268325 - | permease component of C4 dicarboxylate transporter Atu5270 270396 - 269848 - | permease component of C4 dicarboxylate transporter TERM 195 270860 - 270850 - g 85 -5.4 -5.09895 | opp_overlap 270850 TATCTATCTAAAAAA GTGA AGC TCAC TTGGTCCGCCTTCGC Atu8049 270826 - 270972 + | hypothetical protein Atu5271 272027 - 271308 - | hypothetical protein Atu5272 272122 - 272733 + | glutathione S-transferase Atu5273 273308 - 272865 - | MarR family transcriptional regulator TERM 196 273268 - 273258 - G 70 -3.2 -4.62984 | TGAGTAGAGAGAAAA GCAC AGC ATGC TTCCAAGGCAAAATC Atu5274 274300 - 273401 - | AraC family transcriptional regulator TERM 197 273767 - 273739 - G 72 -11 -3.29144 | gap 1, overlap 273742 CCATTCCGCGCAGAA GACCGGGTGGTGC TGAA GCTCCACCCG-TC GAACGGAGCACCTCG TERM 198 273765 - 273742 - G 72 -13.8 -2.52623 | overlap 273739 TTCCGCGCAGAAGAC CGGGTGGTGC TGAA GCTCCACCCG TCGAACGGAGCACCT TERM 199 274135 - 274110 - G 76 -7.5 -4.51097 | opp_overlap 274109 274110 274113, overlap 274111 GGAACCAGCACAAAA TCACCGGTCGT CAAG ACGATCGGTGC CTTTCCGGCAACTGT TERM 200 274134 - 274111 - G 72 -11 -3.29935 | opp_overlap 274110 274109 274113, overlap 274110 GAACCAGCACAAAAT CACCGGTCGT CAAG ACGATCGGTG CCTTTCCGGCAACTG TERM 201 275123 - 275143 + G 74 -6.7 -4.30576 | overlap 275124 CCGATGCCTTCCACG ACGCTCCCG GGG CGGAAGCGC TTTTGATGCTGCACG Atu5275 274423 - 275367 + | hypothetical protein TERM 202 275419 - 275378 - T 95 -15.1 -3.23899 | opp_overlap 275376 275410, overlap 275373 275380 CCTGAACCAAGTGAA GACGGCGGCGATGGACAGC TTGC GCCATTCATCACCGCCGAC CGTCGTTGGCCGCGC TERM 203 275417 - 275380 - T 100 -16.3 -3.18134 | opp_overlap 275376 275410, overlap 275378 275373 TGAACCAAGTGAAGA CGGCGGCGATGGACAGC TTGC GCCATTCATCACCGCCG ACCGTCGTTGGCCGC TERM 204 275463 - 275445 - T 71 -10.2 -3.21099 | CGCGCTTATCATGAA GTCGACGG TGG CCGGCGAC CCAGGTCGGCGGCCG Atu5276 276278 - 275487 - | dehydrogenase Atu5277 276650 - 277057 + | hypothetical protein Atu5278 277424 - 277924 + | hypothetical protein TERM 205 277925 - 277975 + F 88 -9.7 -4.49556 | gap 1, opp_overlap 277916 277917 277952, overlap 277927 277934 TCCAAAGCAGCGTGA CCCGTCAT-ACGGACGTGCCGCTG AAAC CGGCGGCACGTCCGTTATGAAATA TTTCTTTCATGCGAG TERM 206 277927 - 277973 + F 100 -16.7 -3.85603 | gap 1, opp_overlap 277916 277917 277952, overlap 277925 277934 CAAAGCAGCGTGACC CGTCAT-ACGGACGTGCCGCTG AAAC CGGCGGCACGTCCGTTATGAAA TATTTCTTTCATGCG TERM 207 277934 - 277965 + F 100 -23.8 -3.3862 | opp_overlap 277916 277917 277952, overlap 277927 277925 GCGTGACCCGTCATA CGGACGTGCCGCTG AAAC CGGCGGCACGTCCG TTATGAAATATTTCT Atu5279 278068 - 278658 + | hypothetical protein Atu5280 278719 - 279297 + | hydrolase Atu5281 279707 - 279477 - | hypothetical protein Atu5282 279790 - 280029 + | hypothetical protein Atu5283 280321 - 280683 + | ECF family RNA polymerase sigma factor Atu5284 282552 - 280768 - | alpha-amylase glgA 284108 - 282579 - | glycogen synthase Atu5286 285031 - 284618 - | hypothetical protein Atu5287 285705 - 285106 - | hypothetical protein Atu5288 286134 - 285721 - | hypothetical protein TERM 208 285895 - 285913 + g 71 -8.8 -3.7732 | overlap 285896 AAAGCTATTGGCGCC TTCGACCG GTG CGGTCGGG TTCTTCGTGTCAGGG TERM 209 285940 - 285952 + g 78 -10.5 -3.95324 | opp_overlap 285936 AGGGGTAGCAACGGC CGGCG TAT CGCCG TTGTTGTTGGCGGTC TERM 210 286017 - 286030 + g 72 -2.3 -4.73388 | CGGAAAAGAGCGCGG CGGCA AAAA TGGCG TTTTTCATAGGGCTT Atu5289 286984 - 286361 - | TetR family transcriptional regulator TERM 211 287003 - 287017 + H 71 -7.2 -3.93868 | opp_overlap 287002 287003 287006, overlap 287002 GGCTCTCTTGCAAAT TTACAC TCA GTGTAA TATTTATTTTACACC TERM 212 287501 - 287479 - g 85 -2.7 -5.42259 | gap 1 CCACTGCTAAAAAAA GGAACGGACG CGCG CGTC-GTTAC CGTGTCTAGCGTCGC TERM 213 287738 - 287750 + G 70 -4.1 -4.65584 | GAAATAGCTTGCAGG GTTTG GCG CGAAC TTTTCTCTGGTTTCT Atu5290 287062 - 287967 + | dehydrogenase TERM 214 288422 - 288460 + G 74 -10.9 -3.46783 | gap 2, overlap 288433 TTGGATGGTCCCGCC GGGCAGGCCTGCAGGGCGG GTG CCCCCTCGC-GGCC-GCCC TGTTTGAGTTGGATG TERM 215 288433 - 288462 + G 85 -12.8 -3.77219 | overlap 288422 CGCCGGGCAGGCCTG CAGGGCGGGTGC CCCCTC GCGGCCGCCCTG TTTGAGTTGGATGAT Atu5291 288139 - 288771 + | TetR family transcriptional regulator Atu5292 288764 - 289126 + | hypothetical protein Atu5293 289123 - 289542 + | hypothetical protein Atu5294 289539 - 289754 + | hypothetical protein Atu5296 290716 - 291624 + | arylester hydrolase Atu5297 291725 - 292648 + | hydrolase Atu5299 292847 - 293941 + | hypothetical protein Atu5300 294510 - 294094 - | hypothetical protein Atu5301 295256 - 295017 - | hypothetical protein Atu5302 296709 - 295402 - | aminotransferase, class III TERM 216 297596 - 297616 + G 72 -12.6 -3.02263 | opp_overlap 297592, overlap 297576 GCTCGGAGAGAGCCG GCCTTCGC TAATT GCGAAGGC TCTTGCCAAACATGT dgdR 296811 - 297656 + | LysR family transcriptional regulator Atu5304 297755 - 298255 + | hypothetical protein Atu5305 298956 - 298516 - | hypothetical protein Atu5306 300536 - 299436 - | citrate synthase 2 TERM 217 301697 - 301711 + G 73 -4.2 -4.62069 | TGAAGCTGCCTCGCG GTGCGG CGC TTGCAC TTTTTGCCGTAGCAC Atu5307 300592 - 301812 + | related to citrate synthase Atu5308 302140 - 302478 + | hypothetical protein Atu5309 302720 - 303229 + | ECF family RNA polymerase sigma factor Atu5310 303316 - 304251 + | transmembrane sensor Atu5311 304372 - 306831 + | TonB-dependent receptor Atu5312 306832 - 307812 + | ABC transporter, substrate binding protein (iron) Atu5313 307812 - 308618 + | hypothetical protein fepD 308615 - 309700 + | ABC transporter, membrane spanning protein (iron) TERM 218 309920 - 309931 + G 70 -4.4 -4.57569 | GAAAGTTTCCGGTCC CATC TGCA GATG TTTTTAAGGCGCTGC TERM 219 310550 - 310591 + G 76 -9.3 -4.03234 | overlap 310547 310554 TCTGCGGTGTTGCGC TGACGGCGATTGTCACGGC AGCG GCTGGGCCGATCGCCTTCG TTTCTCTGGCCGCAC TERM 220 310554 - 310587 + G 77 -10.9 -3.65294 | overlap 310547 310550 CGGTGTTGCGCTGAC GGCGATTGTCACGGC AGCG GCTGGGCCGATCGCC TTCGTTTCTCTGGCC fepG 309820 - 310803 + | ABC transporter, membrane spanning protein (iron) TERM 221 311196 - 311217 + G 77 -11.5 -3.63782 | GTCGCATTGGCAATG GCTGCGACG CAGA CGACGCAGC TTTCCACTCGTCTTG fepC 310800 - 311645 + | ABC transporter, nucleotide binding/ATPase protein (iron-siderophore) Atu5317 312060 - 311755 - | hypothetical protein TERM 222 312135 - 312125 - H 70 -6.8 -4.10161 | overlap 312127 CATGAGCTTGGAAAA CACG CGG CGTG CCGGCCGACCGGCAA Atu5320 313421 - 313960 + | haloacid dehalogenase Atu5321 313965 - 314324 + | ArsR family transcriptional regulator TERM 223 314333 - 314385 + G 76 -9 -4.08767 | opp_overlap 314367, overlap 314327 TGTTTGATCTGCCCG CGGCATACGCGGCGCATTTGCGTC AACCA GACCAGGATGCGCTGCGTCCGTCG TTTTCCACGCATAAG Atu5322 314317 - 315024 + | hypothetical protein TERM 224 315913 - 315938 + G 73 -8.9 -3.88731 | overlap 315914 315931 TCCTGTTATTGACAG CGCCATCGACC ATGG GGGCGATGGCC TTTGCTGTCGTCTTC TERM 225 315914 - 315937 + G 70 -12.4 -2.92516 | overlap 315913 315931 CCTGTTATTGACAGC GCCATCGACC ATGG GGGCGATGGC CTTTGCTGTCGTCTT TERM 226 316049 - 316081 + G 75 -8.3 -4.27584 | opp_overlap 316048, overlap 316071 CCAGGGAAAGATGAT GGCGGCACGGCTGAT CCT GTCAGCGCTGGCGCC TTTTGCGTTGGCGCT Atu5323 315021 - 316274 + | hypothetical protein Atu5324 317294 - 316278 - | zinc-binding oxidoreductase TERM 227 316864 - 316854 - G 72 -2.4 -4.76644 | AAGATCGACCAAAAA CTGC CAG GCCG TCAATAGCGACATCG TERM 228 317025 - 317012 - G 72 -2.3 -4.82667 | overlap 317014 GTACCATAGCAAAAA CCTCG TCAC CGACG CTGAATGCCGAAACA Atu5325 317384 - 318286 + | LysR family transcriptional regulator TERM 229 318501 - 318452 - g 74 -11.3 -3.45945 | gap 1, opp_overlap 318451 318448 TTCATCTACAAGCAA GCTCGTCGGCTGGCGGGGCGGG AAGGTCG CCCGCCCCG-CTGACATCGAAC ATGGCTTGCATCGTT Atu5326 318322 - 318525 + | hypothetical protein Atu5327 319639 - 318758 - | LysR family transcriptional regulator TERM 230 319902 - 319879 - g 79 -9.6 -4.15106 | opp_overlap 319888 GAGCAAGCCGTAAAA CTGATAACCG ACAA CGGCTACCAG GTGTCTTACGTCCCC TERM 231 320696 - 320660 - g 70 -3.7 -4.67635 | gap 1, overlap 320661 320662 GGCAAAACCAGAAAA TCGT-CGTCACACCGC ATATCG GCGGCGTGACCCAGGA GGCCAACGTTCGCGT Atu5328 319765 - 320814 + | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding menG 320950 - 321534 + | hypothetical protein TERM 232 321579 - 321536 - f 71 -10.9 -3.20723 | opp_overlap 321541, overlap 321539 CGTCCACGAACTGAA CGATGCTGGCCGGCGCTCC GGAGGG GAAACGCCGGCCAGTCTCT AGCGCTCTGAACTAA TERM 233 321541 - 321574 + F 86 -14.6 -2.89191 | gap 1, opp_overlap 321539 321536 ACGAACTGAACGATG CTGGCCGGCG-CTCC GGAGG GGAAACGCCGGCCAG TCTCTAGCGCTCTGA TERM 234 321648 - 321663 + G 72 -2.4 -4.82901 | TTGATTAGAAATACC GCGCTG GTGA CGACGC TTTTTCTCGGCGCAG TERM 235 321986 - 321997 + G 75 -2.2 -4.91084 | TGCGCGTATCGTTGA GGAC CCAG GTTC TTTTATTGTTCAGTC Atu5330 321624 - 322580 + | hypothetical protein TERM 236 322656 - 322683 + G 82 -12.6 -3.57792 | overlap 322657 TATTCATTGGATTCG GCGCGCTCGGCC TCTG GGCTGGGCGCGA TTTGACCATGGGTAC TERM 237 322657 - 322682 + G 79 -16.1 -2.74461 | overlap 322656 ATTCATTGGATTCGG CGCGCTCGGCC TCTG GGCTGGGCGCG ATTTGACCATGGGTA Atu5331 322580 - 323044 + | hypothetical protein TERM 238 324425 - 324442 + G 72 -2.5 -4.82901 | opp_overlap 324404, overlap 324427 GGGCTCTGACGATCT CCCACGG AAAT CCGAGCG TTTTTGTGGAGCGGC Atu5332 323056 - 324564 + | hypothetical protein TERM 239 324582 - 324601 + F 91 -12.1 -4.15884 | opp_overlap 324560 CCGATCTTCGATGAG CGGCCGC TGGAAT GCGGCCG TTATTCTTTCCTTCA Atu5333 324634 - 325614 + | 2-hydroxyacid dehydrogenase Atu5334 325617 - 326882 + | hydroxypyruvate reductase TERM 240 327431 - 327407 - g 75 -7.8 -4.2018 | overlap 327409 AAACCGGGAAAACAA CATCCGGGCA GGATT TGCCCGGACC GGAAAGTTAATGCCA TERM 241 327429 - 327409 - g 82 -12.6 -3.68836 | overlap 327407 ACCGGGAAAACAACA TCCGGGCA GGATT TGCCCGGA CCGGAAAGTTAATGC Atu5335 326886 - 327545 + | dehydrogenase Atu5336 328049 - 327696 - | hypothetical protein Atu5337 328198 - 328590 + | hypothetical protein Atu5338 329389 - 328595 - | AraC family transcriptional regulator Atu5339 329487 - 330398 + | hypothetical protein TERM 242 330851 - 330885 + G 70 -3.5 -4.67697 | gap 1 TCGTCATCCATGGGG GCTGTTTCCACCGCTT GGTG GAGCGG-GAACACGGC TTTCTTGTTTTCCCC Atu5340 330813 - 331127 + | hypothetical protein Atu5341 332166 - 331198 - | AraC family transcriptional regulator Atu5342 332255 - 333142 + | hypothetical protein TERM 243 333497 - 333514 + G 78 -6.9 -4.62069 | overlap 333499 CATCTGGACCTTCAA GCTGCGG CAGA CCGCAAC TTTTTCCGATGGGCG Atu5343 333186 - 334739 + | ABC transporter, substrate binding protein (oligopeptide) TERM 244 335666 - 335680 + G 71 -5.7 -4.36914 | opp_overlap 335666 GGACAGACCGTGAAA GCGAT GGAAA ATCGC TTTTATGCCCGCAAC Atu5344 334736 - 336190 + | bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioesterase Atu5345 336187 - 337158 + | ABC transporter, membrane spanning protein (oligopeptide) TERM 245 337350 - 337370 + G 82 -11.1 -3.9392 | GCACGGATGCGCTCG GCCGCGACA TGC TCTCGCGGC TTATTTGGGGTGCAC Atu5346 337163 - 337990 + | ABC transporter, membrane spanning protein (oligopeptide) TERM 246 338413 - 338452 + G 73 -10.2 -3.60098 | gap 1, overlap 338395 GCGAGCATGCAGCTC CCTGATGCCGCAAATTTCG GGC TGAGATTTCCG-CATCAGG TTTCGGGTGGACAGT Atu5347 337996 - 339603 + | ABC transporter, nucleotide binding/ATPase protein (oligopeptide) TERM 247 339737 - 339771 + G 70 -10.1 -3.45054 | gap 1, opp_overlap 339737, overlap 339729 339742 CCTCGACCAGAGAAT GTCATCGTCGTTGATC GGTC GATCAGCGGCG-TGGC TTGTCGGTTATACGG Atu5348 339593 - 340501 + | lipase/esterase Atu5349 341446 - 340958 - | hypothetical protein Atu5350 341977 - 343083 + | hypothetical protein Atu5351 343108 - 343281 + | hypothetical protein tnp 344884 - 343376 - | TnpA family transposase tnp 345166 - 346704 + | IS3 family transposase Atu5354 350670 - 347092 - | autotransporting virulence factor family member Atu5355 351011 - 351286 + | hypothetical protein Atu8204 352187 - 352026 - | hypothetical protein TERM 248 352220 - 352237 + H 78 -6.9 -4.59853 | overlap 352221 GTCCCTGCCCATGGA TCGCACC AGCA GGTGCGC TTTTTGGACCGTTCG TERM 249 352221 - 352236 + H 73 -10.4 -3.3543 | overlap 352220 TCCCTGCCCATGGAT CGCACC AGCA GGTGCG CTTTTTGGACCGTTC TERM 250 352409 - 352432 + H 79 -11 -3.70076 | overlap 352396 GAACTCGGTCACCGA GCTTTCGGTG ATGA CACCGCAAGC TTTACCTCGCTTTGG TERM 251 352598 - 352633 + G 76 -10.3 -3.71527 | overlap 352607 TCCTTTATATTTTCG CGCGGTCGGTCGAGC AGGGCC GCTCCGCCGGCCTCG TTTCGATCCTTGGCA Atu5358 352498 - 353148 + | RhtB family transporter TERM 252 353273 - 353246 - T 100 -15.7 -3.37533 | opp_overlap 353246, overlap 353239 CCTGAAAACCAGCAA GGGATCGGGAA TTTGCG TTCCCGATCCC TTTTTTTAGTCAAAC TERM 253 353246 - 353273 + T 100 -16.4 -5.52384 | opp_overlap 353246 353239 CCTGAAAACCAGCAA GGGATCGGGAAT TTGC GTTCCCGATCCC TTTTTTTAGTCAAAC Atu5359 353486 - 353283 - | hypothetical protein TERM 254 353499 - 353522 + r 75 -11 -3.33696 | CATTTCTTTTCAGGG GGTCCTCTCC TCGT GGAGAGGAGC TTACTTGGCGACGAG Atu5360 353747 - 353523 - | hypothetical protein TERM 255 353859 - 353832 - R 74 -11.4 -3.29144 | TCACCCTCTCCACAA TGGTTTCCCTGA CCAT TCAGGGAAACAA ACCGATTTCGATCCG aqpZ 354595 - 353909 - | aquaporin Z Atu5362 355484 - 354753 - | hypothetical protein TERM 256 355537 - 355566 + r 100 -17.9 -3.55444 | gap 1, opp_overlap 355527 355526, overlap 355494 355493 GAAAGCCGGCTGTTG CCGGGGCGCA-GCT TTG GGCCTGCGCCCCGG TTTGGCCAATGACCA Atu8205 356303 - 355857 - | hypothetical protein TERM 257 356282 - 356272 - G 74 -3.2 -4.86385 | ATCCCCAAAAACAAA GCAA GCG CTGC AAGAATGTTTTTTGT Atu5364 359120 - 356355 - | autotransporting virulence factor family member TERM 258 357062 - 357023 - G 77 -3.4 -4.87273 | gap 1, opp_overlap 357034 357035, overlap 357024 357034 AATAGCCGACAAAAA GGCCGAAGCGATCGAAACC TCC GGCTTCGGTTTCA-CGGCC GAGCAGATCCTGCCC Atu5365 359156 - 359464 + | hypothetical protein Atu5366 359862 - 360248 + | hypothetical protein Atu5367 360245 - 360589 + | IS66 family orf2 TERM 259 360654 - 360634 - T 74 -6.8 -4.29432 | GAAAGGGCAGGAAAA CCGGAGCA AAATA TGCTCTGG TAGACGTCATGACGC Atu5368 360980 - 360609 - | hypothetical protein tnp 362597 - 361737 - | transposase tnp 362884 - 362594 - | transposase Atu5372 363152 - 364387 + | hypothetical protein Atu5373 364466 - 364681 + | hypothetical protein Atu8064 364811 - 364704 - | hypothetical protein TERM 260 364793 - 364774 - G 72 -2.8 -4.79752 | opp_overlap 364776 GGCAAGAACAGAAAA GATACCAC ATTG GTGATTTC GACCAGTTCGGCAAC Atu5374 365117 - 364875 - | hypothetical protein TERM 261 365234 - 365261 + H 71 -9.8 -3.59979 | GATCCGTTGACGTTT GGTCTCGCACGC CAGT GCGTTCGACACC TTTCCGATGCGGCAA Atu5375 365268 - 366593 + | two component sensor kinase Atu5376 366741 - 367064 + | hypothetical protein TERM 262 367655 - 367622 - g 71 -6.7 -4.17048 | gap 1, opp_overlap 367630 CTCGCTCGAAAAGAA CAGGAAATG-CGCCAG ATC CTGGAGGCGCTTCCTG CGGCCGTCTACACCA TERM 263 367874 - 367906 + G 70 -9.8 -3.53224 | gap 1, opp_overlap 367844 367866, overlap 367883 GAAGCGATTGCGCAA CGGCCGG-ACGGCAC AATG GTGCCTTTCCTGCCG TTTCCGACACCGATG Atu5377 367193 - 368593 + | two component sensor kinase Atu5378 368669 - 369049 + | two component response regulator Atu8206 369486 - 369193 - | hypothetical protein TERM 264 369535 - 369522 - R 77 -3.7 -4.99947 | overlap 369517 GTGAAGCAAAGAAAA CTGCG ATTT CGCGG CAGAGTTCCCGGGAT Atu5380 370293 - 369790 - | acetyltransferase TERM 265 370188 - 370216 + g 74 -11.7 -3.54459 | overlap 370173 370168 CCCTAAGCGTTTTGT CGCTGTGGGTATG CTG CATTGCCACAGCG TTTCCCAGGAATTCG Atu5381 374174 - 371016 - | AcrB/AcrD/AcrF family protein TERM 266 371051 - 371082 + g 76 -12.3 -3.34089 | opp_overlap 371057, overlap 371057 371066 371070 TGTCGCGATGCTCTT CGAAAAGCTCGCC CTGGCT GGCGGGCTTCTCG TCTTCCTTCTTCGCC TERM 267 373600 - 373577 - G 72 -2.3 -4.84761 | opp_overlap 373589 373593 AGACGTCGATAAAAA TCTTCTGCG GCTGGT CGCCGAGGA TGACGGCCTTTTCGA TERM 268 373829 - 373809 - G 71 -6.1 -4.4009 | gap 1, opp_overlap 373808 373809 GCGCACCTGATAAAA GGCGTCCG CCACGT CGG-CGCC GTTGGTATCACCCTT Atu5382 375354 - 374200 - | HlyD family secretion protein TERM 269 374381 - 374369 - G 70 -3.4 -4.62069 | CCGTCATCGGAAAAA TCGA CGACT TCGA CCGGCCGCGAGCTGA TERM 270 374488 - 374476 - G 71 -6.9 -4.18762 | opp_overlap 374468 374467 374476 374477, overlap 374477 AAGCGGCACCGAAAA CGCGG GAA CCGCA TTGTCGGCCTTTGCC TERM 271 375245 - 375256 + g 80 -3.6 -5.0916 | GGTCGCACCACGTCC GGTG CCTC CGCC TTTTTCTCTTCCGAG Atu5383 376013 - 375414 - | TetR family transcriptional regulator TERM 272 375946 - 375970 + g 73 -10.7 -3.63744 | opp_overlap 375941, overlap 375944 TGCTTGAACAGCCGC TCGGCCGCATC AAG GATGCGGGTGA TATTTTCCCGGCGGA Atu5384 379138 - 376775 - | hypothetical protein TERM 273 378744 - 378758 + g 73 -9.2 -3.96327 | opp_overlap 378731, overlap 378754 AAGGCACCGTCGGTC GCCGCG CAT TGCGGC TTTCTGGTCGAGGAT TERM 274 379560 - 379579 + G 85 -3.5 -5.4433 | opp_overlap 379560 GGACGGTATCACAAT GCTGCTG CCGAGA CAGGAGC TTTTTCTTTATATGT Atu5385 379378 - 380559 + | hypothetical protein Atu5386 381305 - 380703 - | TetR family transcriptional regulator Atu5387 381772 - 381308 - | hypothetical protein TERM 275 382181 - 382157 - g 100 -12.1 -5.05079 | ACAATCAGACAAAAA GCGGCGCCC GCAAAAT GGACGCCGC TCGATAGGAAGATCA Atu5388 381930 - 382283 + | hypothetical protein Atu5389 383099 - 382263 - | non-heme haloperoxidase TERM 276 383233 - 383220 - H 81 -6.7 -4.8048 | TCTCGACACGAAAAA CCGAT CTGT ATCGG AAGCCATTCAATTTC Atu5390 383329 - 384342 + | AraC family transcriptional regulator TERM 277 384566 - 384578 + T 71 -4.7 -4.63932 | opp_overlap 384558 384566, overlap 384567 CCATCAAGGCGAAGA CGCCG AAA CGGCA TTTTCTTGAGGGGTA Atu5391 385506 - 384757 - | short chain dehydrogenase TERM 278 386307 - 386276 - g 71 -8.7 -3.7104 | gap 1, opp_overlap 386275 ATTCAGAGTGAACAA CGGCGACATGCTGC GAGAT GCGGCA-ATCGCCG GTCTTGGCATCGCAC Atu5392 385617 - 386522 + | LysR family transcriptional regulator Atu5393 387812 - 386787 - | LacI family transcription regulator TERM 279 387927 - 387896 - H 72 -12.4 -2.68806 | opp_overlap 387923, overlap 387893 387892 387905 387923 CTCCAGAACAATTCA GATCGATAACGGGA ACGT TCCCATTAACGATC CCACTGCTGATCGAT dapA 387984 - 388925 + | dihydrodipicolinate synthase Atu5395 389105 - 390490 + | MFS permease TERM 280 390518 - 390553 + T 100 -16.2 -3.43492 | ATTCTTGGCCTATCT TACGACCGCTCCTTTG TTCA CCGAGGGGCGGTCGTA TTCTCATCACTGTGG Atu5396 390959 - 390744 - | hypothetical protein Atu5397 391565 - 391161 - | hypothetical protein TERM 281 391353 - 391320 - G 74 -5.9 -4.57837 | gap 1, overlap 391322 391341 391342 ACAGCGGGCGAAAAA CAGCCAGCCGGCGC AACAGAA GCGCCGGC-AACAG GCGGAGAGACCTCGG dapA 392921 - 391992 - | dihydrodipicolinate synthase Atu5399 393937 - 392984 - | putative phosphoglycerate dehydrogenase Atu5400 394889 - 393963 - | ABC transporter, nucleotide binding/ATPase protein (sugar) TERM 282 394579 - 394569 - G 74 -6.8 -4.36903 | CTCATCAAAGAGAAA GACC TTC GGTC CGCGCACCATGGCGC Atu5401 395868 - 395035 - | ABC transporter, membrane spanning protein (sugar) Atu5402 396779 - 395886 - | ABC transporter, membrane spanning protein (sugar) Atu5403 398306 - 396975 - | ABC transporter, substrate binding protein (sugar) TERM 283 398612 - 398627 + r 90 -8.2 -4.6902 | opp_overlap 398603 CCAGAACGGCGTCTA CCGTGC GAGT GCGCGG TTTTTGGCATTGTGA Atu5404 399316 - 398609 - | transcriptional regulator Atu5406 401496 - 400747 - | GntR family transcriptional regulator TERM 284 401515 - 401533 + r 79 -11 -3.74872 | CTGCTCCGCATCCAG TCGAGCGG CGG TCGCTCGA TTTGATCACATCCAT Atu5407 402772 - 401642 - | hypothetical protein TERM 285 402106 - 402088 - G 74 -11.6 -3.51232 | overlap 402084 GGGTCTGGAAATCAA GGCCGCCC GGT GCGCGGCC CACATAGGCGTCCTT TERM 286 402800 - 402823 + r 81 -2.4 -5.33921 | gap 1, overlap 402806 TTGATGTTTCCTGAT GGGATGCGCTG CGG TGGCG-ATCTC TTTTTTGGTTGATTT Atu5408 403730 - 402876 - | ABC transporter, membrane spanning protein (amino acid) Atu5409 404669 - 403734 - | ABC transporter, substrate binding protein (amino acid) Atu5410 405297 - 406412 + | ABC transporter, nucleotide binding/ATPase protein Atu5411 406432 - 407472 + | ABC transporter, substrate binding protein TERM 287 408022 - 408049 + G 76 -9.1 -4.12188 | overlap 408017 408003 CAGGTTTCGGGCGCC GGACCATGGCG CATTCT CGTCACGGTCC TTTTGCCGATGATGC Atu5412 407482 - 408309 + | ABC transporter, membrane spanning protein Atu5413 408302 - 409123 + | ABC transporter, membrane spanning protein Atu5414 409155 - 410579 + | Xaa-Pro dipeptidase Atu5415 410548 - 411255 + | hypothetical protein TERM 288 411729 - 411714 - T 71 -7.5 -3.9392 | CGGCAGCGGAAACAA CGCGC GGTCCA GCGCG ATCCCCACCTCCCGG TERM 289 411834 - 411850 + T 86 -6.5 -5.06414 | opp_overlap 411836, overlap 411836 TAATGACGCGGAATC GAGTGCA TTT TGCACAC TTTTTCTTGGCGGCA Atu5418 413358 - 412276 - | opine/octopine dehydrogenase Atu5419 413745 - 414725 + | LysR family transcriptional regulator TERM 290 415446 - 415436 - g 71 -6.8 -4.21194 | CCTGATCAGGCAAAA GGAC AAG GTCC GCAAATACTATGATG potF 414780 - 415880 + | ABC transporter, substrate binding protein (putrescine) potH 415965 - 416948 + | ABC transporter, membrane spanning protein (putrescine) TERM 291 417670 - 417684 + G 70 -10 -3.44051 | opp_overlap 417669 417668 CACCCGAGATCAATG CGATGG CGA CCATCG TTCTCATCGTCACCG potI 416958 - 417749 + | ABC transporter, membrane spanning protein (putrescine) potG 417753 - 418823 + | ABC transporter, nucleotide binding/ATPase protein (putrescine) Atu5424 418884 - 420362 + | oxidoreductase nahD 420373 - 420966 + | 2-hydroxychromene-2-carboxylate isomerase TERM 292 421379 - 421415 + G 71 -8.8 -3.72231 | gap 2, opp_overlap 421368 AAACTCTACGCCGTT GGCCTCGACGACCGTGAT ATC GTCACGCTCG-C-AGGCC TTATTGCCTATGTGA Atu5426 420974 - 421480 + | hypothetical protein Atu5427 421482 - 422060 + | hypothetical protein TERM 293 422691 - 422716 + G 71 -7.5 -4.19735 | opp_overlap 422691, overlap 422682 ACTCTGGTTGCAGAA GCTGTAACTGC TGTG GCAGGTGCGGC TTTAATTTTGGGCAA dinF 422061 - 423398 + | DNA-damage-inducible protein F Atu5429 423595 - 423428 - | transcriptional regulator TERM 294 423983 - 424015 + r 78 -13.5 -2.52676 | opp_overlap 423961 423994, overlap 423993 ACAGGGCGTGGGGTG CCTGACATCAACGCT CGA AGCGATGATCTCAGG TGGATTCGGCAAATG Atu5430 424433 - 424011 - | hypothetical protein TERM 295 424719 - 424729 + r 81 -8.2 -4.24711 | TCTCAACGGTTATGC CCGC TGA GCGG TTTCTTGAAGTTTTA Atu5431 425153 - 424764 - | hypothetical protein Atu5432 425640 - 425332 - | hypothetical protein TERM 296 425757 - 425775 + r 74 -7.5 -4.07568 | CGTCACTACATGGTC GAAAGTG CATAT CACTTTC TTTTACGCCAGGGCC Atu5433 427075 - 426065 - | LacI family transcription regulator TERM 297 427758 - 427787 + G 71 -7.1 -4.18018 | gap 1, opp_overlap 427779 GAGATTGCCCGTCTC GCCGCCGACATTCC ACA GGAA-GTCGCAGGC TTTTGCCTCGACACC Atu5434 427209 - 428132 + | hypothetical protein Atu5435 428152 - 429324 + | oxidoreductase iolH 429568 - 430470 + | myo-inositol catabolism protein TERM 298 430597 - 430636 + T 74 -10.6 -3.58726 | AGATGGCGAGCTCGA GACCGCCGAGGGCCCGGT GAGG ACTGGAAGCTCGGTGGTC TTCTCTGTCAGACCA Atu5437 431174 - 430782 - | hypothetical protein TERM 299 431487 - 431475 - g 73 -4.8 -4.58395 | GCGACTGTCGAAAAA GTGC GAAAG GCAC ACGGCCGTATCGACG fabG 431256 - 431987 + | 3-oxoacyl-(acyl-carrier protein) reductase TERM 300 432034 - 432001 - T 76 -10.3 -3.66654 | overlap 432004 GAGGTTAAGTCGAAA CGATGTACCCGATCT GAGC AGGTCGGGTACAGCA AACGCTCGATGACAG TERM 301 432031 - 432004 - T 79 -12.8 -2.94412 | overlap 432001 GTTAAGTCGAAACGA TGTACCCGATCT GAGC AGGTCGGGTACA GCAAACGCTCGATGA Atu5439 432804 - 432238 - | hypothetical protein TERM 302 432459 - 432478 + g 81 -13.6 -3.34013 | TGTCGCTGCTTTCCT GCGCCTGA AGTT TCAGGCGC TTGATTGGAAGCGTG TERM 303 433162 - 433139 - g 93 -11.7 -4.40993 | opp_overlap 433137 CAGAAACCAGCAAAA GCCCCAAGC AGGAAA GCTCGGGGC AGGTTCTGTTGTCGT Atu8060 433051 - 433362 + | hypothetical protein Atu5440 433621 - 433391 - | hypothetical protein TERM 304 433674 - 433692 + H 72 -2.4 -4.88918 | GTCGATCGGTTCGAT GTCCTT CGTCTTA AAGGGC TTTTATTTCACGTCC Atu5441 433888 - 434406 + | ABC transporter, substrate binding protein Atu5442 434584 - 436524 + | methyl-accepting chemotaxis protein TERM 305 436560 - 436529 - T 78 -12.3 -3.16921 | opp_overlap 436525 AGGAATTCTGACGAA CCTGCTCCGGAGC CTTCAT GCTCCGGAGCAAC CCGCTTCCTTCAGGA Atu5443 437171 - 436623 - | TetR family transcriptional regulator Atu5444 437282 - 438070 + | short-chain dehydrogenase Atu5445 438128 - 439222 + | oxidoreductase Atu5446 439334 - 440236 + | cultivar specificity protein W78 Atu5447 440268 - 441272 + | zinc-binding oxidoreductase TERM 306 441462 - 441437 - f 73 -10.5 -3.4178 | opp_overlap 441437 441441, overlap 441441 ATCACTTCACTAGAA TGAATCGGTTG GAGC CGACCGATTCA TAAGTTGCGTTGGAC TERM 307 441437 - 441462 + F 75 -12.7 -2.57013 | opp_overlap 441437 441441, overlap 441441 ATCACTTCACTAGAA TGAATCGGTTG GAGC CGACCGATTCA TAAGTTGCGTTGGAC Atu5448 441508 - 441768 + | hypothetical protein TERM 308 441981 - 442008 + F 77 -11.2 -3.61398 | overlap 441982 AACCAAATCGATATC CGCCAGCCGCTG AGGT CAGGGGCTGGCC TTGTTGGACGCGCCG TERM 309 441982 - 442007 + F 83 -14.7 -2.76696 | overlap 441981 ACCAAATCGATATCC GCCAGCCGCTG AGGT CAGGGGCTGGC CTTGTTGGACGCGCC hspAT2 442069 - 442545 + | heat-shock protein TERM 310 442576 - 442555 - f 90 -10.8 -4.25053 | overlap 442552 GCATAACAGAAACAA GGGCGCCG TTGCTG CGACGCCC GTCAACATTGCGGGT Atu5450 442608 - 442907 + | hypothetical protein Atu5451 443045 - 443251 + | hypothetical protein attE 443547 - 444206 + | ABC transporter, nucleotide binding/ATPase protein TERM 311 446579 - 446568 - g 70 -3.6 -4.62471 | GTCAATTGGCAAAAA CAGC GCCG GCCG ATCTGTTGAGGGTAT attG 444203 - 446611 + | ABC transporter, membrane spanning protein TERM 312 446825 - 446843 + G 82 -12.4 -3.65199 | opp_overlap 446824 446823 GGGTGGCGAACAACT GGGCGTCC AAT GGACGCTC TTTCGCTCGGCGCTT attH 446601 - 447665 + | hypothetical protein Atu5455 448336 - 447689 - | hypothetical protein Atu5456 449295 - 448384 - | hypothetical protein dapA 449411 - 450319 + | dihydrodipicolinate synthase Atu5458 450316 - 451482 + | isomerase/lactonizing enzyme TERM 313 451544 - 451527 - g 85 -5.5 -5.07971 | gap 1 CAAAAGAATGAAAAA GCTGGCGC TGG GCACC-GC GACCGCCGTTTTGAT TERM 314 451979 - 451965 - g 89 -4.2 -5.18726 | overlap 451959 GGCTTATAACAAAAA GCTTCT GGA AGACGC GGGCGTTGCGGTTCC TERM 315 452378 - 452360 - g 76 -8.9 -4.07687 | AGGGGTCGGCCAAAA GCGACAT CGTTT ATGTCGC GCCGCCGCTTCATCC Atu5459 451507 - 452778 + | ABC transporter, substrate binding protein (sugar) Atu5460 452862 - 453788 + | ABC transporter, membrane spanning protein Atu5461 453799 - 454629 + | ABC transporter, membrane spanning protein TERM 316 454801 - 454774 - g 84 -11.4 -4.12188 | gap 1 CGACGATGTTGAAAA TC-CTTGCCGGTC TCG AACCGGCAAGCGA AGGGCAGATTTTCAT Atu5462 454632 - 455714 + | ABC transporter, nucleotide binding/ATPase protein TERM 317 455730 - 455753 + G 90 -14.6 -3.63569 | gap 1 TCCTCGTCACCGGAT CGGCA-GGCCG TGT CGGCCGTGCCG TTGTTGCCGCCTTGC TERM 318 456068 - 456049 - g 80 -10.6 -4.11216 | GGTCTATCCGGAAAA CCGGCCGG AGTT CCTGCCGG TCACCGAGGACCATC TERM 319 456237 - 456247 + G 81 -8.2 -4.72272 | AGGACAGTTTCTTTT CCGG TCC CCGG TTTTTCCTGCGGCCG galE 455711 - 456694 + | putative UDP-glucose 4-epimerase Atu5464 456691 - 458373 + | IclR family transcriptional regulator fabG 458377 - 459138 + | 3-oxoacyl-(acyl-carrier-protein) reductase kup 461107 - 459194 - | potassium uptake protein TERM 320 460597 - 460583 - G 70 -3.4 -4.67011 | overlap 460585 AATCGGACCGAAAAA GACGGC GAC GGCGCC GGTACCCTTGGACTG TERM 321 460598 - 460585 - G 73 -9.5 -3.94812 | overlap 460583 TCGGACCGAAAAAGA CGGCG ACGG CGCCG GTACCCTTGGACTGG Atu5467 461363 - 461674 + | hypothetical protein Atu5468 461851 - 461654 - | hypothetical protein TERM 322 461741 - 461728 - G 72 -2.3 -4.81357 | ATATCAGAAAACAAA GATCG AGGG CGGTC GGCATCATGGTCGTG dinP 461941 - 463014 + | DNA polymerase IV Atu5470 463032 - 463238 + | hypothetical protein Atu5471 463508 - 463744 + | hypothetical protein TERM 323 464446 - 464463 + T 70 -9.1 -3.71848 | TTATCCATGATTGGC CCCGAGT GCCG GCTCGGG TTCTTGATAAGAACG dat 466146 - 465274 - | D-alanine aminotransferase Atu5474 467143 - 466208 - | 2-hydroxyacid dehydrogenase Atu5475 467588 - 467175 - | hypothetical protein pyrG 468851 - 467628 - | CTP synthase Atu5477 470047 - 468878 - | peptidase Atu5478 471141 - 470044 - | chloromuconate cycloisomerase argE 472301 - 471138 - | acetylornithine deacetylase TERM 324 471907 - 471896 - G 72 -2.2 -4.83615 | CATCCCCGACAAAAA CACC GAGA AGTG TGCCGGACCATGCCG Atu5480 473079 - 472315 - | ABC transporter, nucleotide binding/ATPase protein Atu5481 473804 - 473076 - | ABC transporter, membrane spanning protein Atu5482 474647 - 473838 - | ABC transporter, substrate binding protein (amino acid) Atu5483 474855 - 475853 + | GntR family transcriptional regulator Atu5484 476673 - 475927 - | hypothetical protein TERM 325 476670 - 476660 - G 74 -3.2 -4.84529 | TTATAAACGCAAAAA CCTG ATT CAAG CATAGCGGTTAGTCT Atu5485 477090 - 477392 + | hypothetical protein Atu5486 477768 - 477424 - | hypothetical protein Atu5487 477832 - 478152 + | hypothetical protein Atu5488 478166 - 478930 + | hypothetical protein Atu5489 479072 - 479299 + | hypothetical protein ecfR 479966 - 479424 - | ECF family RNA polymerase sigma factor Atu8052 480295 - 480158 - | hypothetical protein catE 482477 - 480336 - | catalase C Atu5492 483156 - 482554 - | hypothetical protein TERM 326 482705 - 482725 + g 70 -3.9 -4.66987 | opp_overlap 482705 GACCGTTTGAGGATA TCCTCTGCC TCC GGCACAAGA TTTTCTTCCACTCTG Atu5493 483498 - 483181 - | hypothetical protein TERM 327 483359 - 483373 + g 70 -3.4 -4.62336 | overlap 483360 CTATTGGCGCCTTCC ACCGGC GCA GTCGGA TTTTTGAGATCCGGT TERM 328 484525 - 484499 - g 73 -4.3 -4.64676 | CGACCGTCAATAAAA CCTCTGCCGCC AAGAA GGCTGCATAAG GTGACGTGTGGTTTT Atu5494 484030 - 484524 + | hypothetical protein TERM 329 484548 - 484572 + F 89 -9.2 -4.57073 | overlap 484549 GTGGTTTTTCTTAGC AGGTCTCCCC AGATC GGGGAGGCCA TTTTTAAAAGGGCTA TERM 330 484549 - 484571 + F 84 -12.7 -3.33922 | overlap 484548 TGGTTTTTCTTAGCA GGTCTCCCC AGATC GGGGAGGCC ATTTTTAAAAGGGCT Atu5495 485227 - 486087 + | hydrolase Atu5496 486867 - 486325 - | TetR family transcriptional regulator TERM 331 486986 - 486961 - H 71 -10.5 -3.22091 | opp_overlap 486967 486967 486971, overlap 486967 486971 ATCGCAAGTCATTAA GTTAAACGGAG GCGC CTCCGTTTATC GGTGCGCCCTTCGTT TERM 332 486980 - 486967 - H 71 -8.1 -3.78597 | opp_overlap 486967 486967 486971, overlap 486961 486971 AGTCATTAAGTTAAA CGGAG GCGC CTCCG TTTATCGGTGCGCCC TERM 333 486967 - 486980 + H 71 -8.1 -3.91897 | opp_overlap 486967 486961 486971, overlap 486967 486971 AGTCATTAAGTTAAA CGGAG GCGC CTCCG TTTATCGGTGCGCCC TERM 334 487893 - 487917 + G 78 -7 -4.66938 | opp_overlap 487884 487883, overlap 487894 GGAAATGCCGATCCT CGGCGCCGCA CTTGT TGCGACGCCC TTTTATATTGGGGCT TERM 335 488040 - 488064 + G 84 -10 -4.21462 | CGGACTTTTCGGACG GGCGAGAGAC GCGCA GTCTCTGGCC TTTTCGGTCGTCGCT Atu5497 487132 - 488121 + | hypothetical protein Atu5498 488249 - 488782 + | oxidoreductase with iron-sulfur subunit Atu5499 488779 - 489768 + | oxidoreductase TERM 336 491687 - 491699 + G 80 -10.5 -3.99898 | ACGCACCGGTGAGAC GCGCG TCT CGCGC TTTCTAGGTTCCTTC Atu5500 489765 - 492068 + | dehydrogenase TERM 337 492394 - 492410 + T 77 -7.9 -4.34263 | opp_overlap 492385 AGAAAGCAGCACCGC GTCCCCG CGC CGTGGAC TTTATGTTCTTAAAA Atu5501 493074 - 492412 - | hypothetical protein TERM 338 493146 - 493162 + r 71 -4.3 -4.57341 | overlap 493148 ATGTAAATCTGCGGC TTGCGGG CTA CACGCGA TTTTTCGGCAGAGTT Atu5502 493944 - 493189 - | hypothetical protein TERM 339 493905 - 493931 + g 71 -5.8 -4.32034 | opp_overlap 493908, overlap 493908 ACCAGGTTGTCGTAG CAATTACCGTCA GTG TGGCGGCAATGG TTTTGATGATCATGC Atu5503 495511 - 494054 - | hypothetical protein Atu5504 495697 - 496290 + | hypothetical protein Atu5505 496294 - 496959 + | two component response regulator Atu5506 496956 - 498314 + | two component sensor kinase TERM 340 498887 - 498875 - g 80 -3.3 -5.1101 | CTACCACGCAAAAAA CGGCA AGC TGACG ACGTTGGACGGCCGG ggt 498561 - 500318 + | gamma-glutamyltranspeptidase TERM 341 500518 - 500542 + G 70 -9.9 -3.50853 | opp_overlap 500517 500514 GGGGCGGAAAAGCAG CCGGTTGCCTT CAT GGGGCCACCGG TTCTGATTGACCGCG gst 500374 - 501072 + | glutathione S-transferase Atu5509 503415 - 501370 - | two component sensor kinase/response regulator hybrid Atu5510 504907 - 503399 - | hypothetical protein TERM 342 504780 - 504770 - G 70 -3.2 -4.64861 | TCCCTCCAAAAGAAA CTGC AAC GCAA TTGTCGTCTTGCCGG TERM 343 505076 - 505113 + r 95 -8.5 -5.03314 | gap 1, overlap 505105 CGTGGGTCAGAAGGT GGAGAGTAGGCC-CTGGA TTT TTTAGAGGCCTTCTTTCC TTTTTTGGAGGTAGG Atu5511 505505 - 505230 - | hypothetical protein Atu5512 505814 - 505590 - | hypothetical protein TERM 344 505847 - 505867 + r 91 -14 -3.09834 | opp_overlap 505847 GAGTCGAAACAAAAA GGCCAGGC AAACC GCCTGGCC TTAAATGATAACGTG TERM 345 505867 - 505847 - R 100 -14.7 -5.28942 | opp_overlap 505847 GAGTCGAAACAAAAA GGCCAGGCA AAC CGCCTGGCC TTAAATGATAACGTG cspA 506155 - 505931 - | cold shock protein TERM 346 506700 - 506743 + G 71 -8.1 -4.14193 | gap 2, opp_overlap 506700 GGACGGGTGTGAAAA GACCGGCGTTCACCGCGCGCC CGTG GGCGCG-GGTGCA-GAAGGTC TTTATCTCATGTTCT TERM 347 506743 - 506700 - g 71 -8.1 -4.08216 | gap 2, opp_overlap 506700 GGACGGGTGTGAAAA GACCGGCGTTCACCGCGCGCC CGTG GGCGCG-GGTGCA-GAAGGTC TTTATCTCATGTTCT dnaJ 506593 - 507198 + | DnaJ family molecular chaperone Atu5515 507599 - 507417 - | hypothetical protein Atu5516 508975 - 507596 - | hypothetical protein Atu5517 509603 - 509343 - | hypothetical protein Atu5518 511147 - 509639 - | hypothetical protein Atu5519 511234 - 511539 + | hypothetical protein TERM 348 511577 - 511542 - T 70 -6.7 -4.19817 | overlap 511545 CCGAGGTAGCTAAAA GAATGCGAGGCGGGC GCCTTT GCGCGCCCCGGGTTC CAAAAGTTTCTCAGC acd 512835 - 511588 - | acyl-CoA dehydrogenase TERM 349 512585 - 512598 + g 78 -2.3 -5.10497 | opp_overlap 512581, overlap 512594 GTTGCATAGGAGACC TCCGG ACCG CCGAA TTTTTTCGGTACGTT Atu5521 513641 - 512862 - | ABC transporter, nucleotide binding/ATPase protein (branched chain amino acid) TERM 350 513203 - 513221 + g 75 -3 -4.88407 | overlap 513204 CGCCGCCGGACGTGA GGCCGG ACAGAAC CCGGCG TTTTTCCTTAAGTCG Atu5522 515120 - 513714 - | hypothetical protein TERM 351 514287 - 514302 + g 70 -10.4 -3.55548 | overlap 514298 GCCGATGATGTGATC GACCGG GAAG CCGGTC TTTGCGGCCGTCTTC TERM 352 514417 - 514451 + g 75 -8.1 -4.15044 | gap 2, overlap 514419 TGCTCATTGCCCGGA TGTGGAACTTCGATCTG CTG CAGATCGAAG--CCATA TTTCTTAGCCAGCAG TERM 353 514650 - 514634 - G 78 -4.3 -4.75356 | overlap 514635 514636 AAACATAGGGAAAAA CGCGACC GTC GGTCGAA TCCGTGCGGCCATGG Atu5523 516211 - 515117 - | ABC transporter, membrane spanning protein (branched chain amino acid) Atu5524 517109 - 516213 - | ABC transporter, membrane spanning protein (branched chain amino acid) TERM 354 516639 - 516627 - G 72 -2.6 -4.78149 | overlap 516628 516637 GGTATAACGGAAAAA GGCC GAGAG AGCC GCCACCATGCCGGCC TERM 355 517106 - 517091 - G 77 -4 -4.99043 | gap 1 CCTCGATAAAGAAAA GCC-AGT CGA ACTCGGC CATCAGATCCCCTCC Atu5525 518026 - 517109 - | ABC transporter, nucleotide binding/ATPase protein (branched chain amino acid) Atu5526 519238 - 518135 - | monooxygenase TERM 356 518661 - 518632 - G 88 -13.5 -3.58522 | AGTACCAGTCGGAAA CGCGGGCGGCC ATATCGCG GGCCGCGCGCG AGGAACCGCCCTGGA Atu5527 519863 - 519261 - | NADH-dependent FMN reductase Atu5528 522531 - 520603 - | two component sensor kinase TERM 357 522809 - 522782 - H 76 -12 -3.02461 | overlap 522763 522784 GAACGGCGCCTAAGA GACGCGCTCATC GAAT GATGATCGCGCC GTCTACGCCAATACC TERM 358 522807 - 522784 - H 72 -11 -3.06815 | overlap 522763 522782 ACGGCGCCTAAGAGA CGCGCTCATC GAAT GATGATCGCG CCGTCTACGCCAATA TERM 359 522917 - 522942 + H 100 -12.5 -5.93252 | TCCACGAGCAGGGTA GCTCTCGACCG GAAA CGGGCGGGAGC TTTTTTATTTTTAGG amiC 522963 - 524114 + | two component sensor kinase TERM 360 524416 - 524436 + G 72 -11.1 -3.28712 | CGTTGCAGATCGTTC TGGAGAGCG GCG CGCTCGCCA TTGTCGAGAGACCGA amiR 524127 - 524735 + | two component response regulator TERM 361 524843 - 524869 + F 100 -10.2 -5.60689 | gap 1 GTGATGGCAAGGGTG CCCGC-AGGCT GTGACA AGCCTCGCGGG TTTTTTGTTATCTGC Atu5531 524983 - 526233 + | ABC transporter, substrate binding protein TERM 362 526252 - 526299 + F 86 -4 -5.39721 | gap 1, overlap 526244 CTCCCCGCGTGGTCC CGCCGAACCATGTTTGGCGGGAC AAA GTCTCGGCAAG-GCGGATCTGCG TTTTTTGTCTGCTCG Atu5532 526472 - 527281 + | ABC transporter, membrane spanning protein TERM 363 527459 - 527471 + G 90 -5.5 -5.27779 | AGGCATTCTCAATCT CGGTC AGG GACTG TTTTTTGGTCTTGGC Atu5533 527283 - 528422 + | ABC transporter, membrane spanning protein Atu5534 528424 - 529173 + | ABC transporter, nucleotide binding/ATPase protein Atu5535 529173 - 529868 + | ABC transporter, nucleotide binding/ATPase protein TERM 364 530963 - 530979 + G 70 -10.1 -3.43071 | opp_overlap 530952, overlap 530952 530944 CAGAGCCGCTCTCGG GACCGGC TGT GTCGGTC TTCGTTCGTCTGGCC Atu5536 529906 - 531645 + | amidohydrolase Atu5537 533507 - 532146 - | mercuric reductase Atu5538 533965 - 533504 - | hypothetical protein Atu5539 535066 - 534191 - | HlyD family secretion protein TERM 365 535046 - 535036 - G 71 -6.8 -4.22535 | overlap 535025 ATAAGGTCAAAAGAA CTCG ACC CGAG ATAAACACGAGGTTT Atu5540 535272 - 535063 - | hypothetical protein Atu5541 537218 - 535269 - | hypothetical protein Atu5542 537658 - 537281 - | hypothetical protein TERM 366 537588 - 537562 - G 72 -2.1 -4.7497 | CGGACGGAGGAAAAA CGCAGATTCGG TAAAG CCCTTTCTGCG GCAGGCGAATTTCAG Atu5543 537883 - 538530 + | AraC family transcriptional regulator Atu5544 538571 - 538945 + | hypothetical protein Atu5545 539111 - 539338 + | hypothetical protein Atu8053 539368 - 539553 + | hypothetical protein Atu5546 540579 - 539626 - | LysR family transcriptional regulator Atu5547 540651 - 541622 + | metallo-beta-lactamase superfamily protein Atu5548 541657 - 542226 + | hypothetical protein Atu5549 542289 - 542816 + | hypothetical protein SEQUENCE gi|159161952|ref|NC_003065.3| Agrobacterium tumefaciens str. C58 plasmid Ti, complete sequence (length 214233) torf6 1502 - 387 - | agrocinopine synthase TERM 1 1688 - 1673 - H 91 -4 -5.44721 | gap 1 AGTACCTGAAAAAAA CCG-GTT AAA AACTCGG AATGAACCGGAAATC TERM 2 1731 - 1718 - H 87 -2.4 -5.59962 | CAAAAGAAAGAAAAA GATG AACCTA CATC CATATTTCGAGAAAA TERM 3 1936 - 1954 + H 84 -5.8 -5.02074 | opp_overlap 1936, overlap 1937 1939 ATCATGATATAAGCA TGCGCGGG AAT CCCGCTCC TTTTTTGAAAGCTAA TERM 4 1939 - 1951 + H 73 -10.5 -3.37655 | opp_overlap 1936, overlap 1937 1936 ATGATATAAGCATGC GCGGG AAT CCCGC TCCTTTTTTGAAAGC TERM 5 2934 - 2955 + G 71 -6.6 -4.2558 | gap 1 TATCTATAGTTTCTT GGCA-CCGT CGCAA ACGGATGCC TTTTGCTGCGAAATA Atu6001 2389 - 3072 + | 5 protein TERM 6 3231 - 3247 + T 74 -2.9 -4.88495 | CTGCGTATTACGATC TGTACGC TGG GCGTTTA TTTTATTGTATGTCT Atu6002 5099 - 3528 - | C protein TERM 7 4992 - 5017 + g 74 -3.3 -4.85599 | GATGTAAGAGTAAGG TCCTCCC AAGAAGGGTGAA GGGAGGA TTTTTCTGACATGGA TERM 8 5233 - 5253 + H 81 -2.6 -5.40072 | gap 1, opp_overlap 5217, overlap 5234 TCAAAGCAGCGGCGT CGACTAGAC GATA GTC-AGTTG TTTTTTTAAAGGAAA rolB 6139 - 6870 + | C' protein Atu8061 7133 - 7399 + | hypothetical protein Atu6004 7578 - 8273 + | D protein TERM 9 8442 - 8458 + F 72 -3.7 -4.7908 | TAGCATCTTTCTAAG CGAAATA AAT TATCTCG TTTGTTTGTGTTTTT TERM 10 8874 - 8893 + G 70 -10.8 -3.5393 | opp_overlap 8874 CTATATCCGCGATAA TCTCCTGA TTTA TCAGGAGA TTTGGACGAAATACT TERM 11 8953 - 8943 - g 77 -3.2 -5.0133 | GAGCGCGCTAAAAAA CGAA ATT TCCG CGTTATATCTTCGTC TERM 12 9263 - 9288 + G 79 -8.9 -4.19817 | TGGCCTTCCTTCCCA CCACGGCTTTC CGGC GAGGGCCGCGG TTTTACCTGGGTGGC Atu6005 8752 - 9696 + | E protein mas1 11383 - 10349 - | mannopine synthase TERM 13 10988 - 11011 + g 70 -3.8 -4.58395 | opp_overlap 10982 10978 GTGAAGAGATTCATT CTGAAACCCA AAAG TGGCTTCCAG TTTTTCCACGCTACG acsx 12847 - 11591 - | agrocinopine synthase TERM 14 11790 - 11802 + g 74 -6.9 -4.3586 | TCTGTCTCATGACGT CGGGC CCT GCCTG TTTTAATGTCGATGG Atu6009 13461 - 14126 + | indole-3-lactate synthase TERM 15 14236 - 14223 - T 85 -6.7 -4.84492 | GTAATGATAATAAAA TGCTG TAGC CAGCA TTAAGATAATCAGCG tms2 16034 - 14631 - | indole acetimide hydrolase tms1 16372 - 18639 + | tryptophan 2-monooxygenase ipt 19337 - 20059 + | isopentenyl transferase Atu6013 20575 - 21135 + | 6a protein TERM 16 21469 - 21455 - T 70 -10 -3.40141 | opp_overlap 21454 21452 21451 21449 GAAAACTGCAAGCAA CACCCA TGA TGGGTG GTGATGTTTTCCGAA Atu6014 22241 - 21618 - | 6b protein Atu8062 22563 - 22258 - | hypothetical protein Atu8054 23223 - 23116 - | hypothetical protein nos 24472 - 23231 - | D-nopaline dehydrogenase TERM 17 24731 - 24751 + r 70 -9.7 -3.45118 | TCCCGCGTCATCGGC GGGGGTCAT AAC GTGACTCCC TTAATTCTCCGCTCA ocd 26095 - 24980 - | ornithine cyclodeaminase TERM 18 25042 - 25030 - G 70 -3.3 -4.63527 | GCAGCATTCCAAAAA GATCC CTT GGCTC GTCTGGGTCGGCTAG odh 27174 - 26092 - | NAD/NADP octopine/nopaline dehydrogenase arc 28225 - 27251 - | arginase noxA 29691 - 28273 - | D-nopaline dehydrogenase TERM 19 29216 - 29196 - G 76 -14 -2.98823 | overlap 29199 TCTGCTGCATATATA GCAGCGGG AGAGG CCCGCTGC CGACGACGGCAACGG TERM 20 29242 - 29199 - G 79 -16.1 -2.72799 | opp_overlap 29239, overlap 29196 GCTGCATATATAGCA GCGGGAGAGGC-CCGCTGCCG ACGA CGGCAACGGGGCCTCT-CGGC AACTGACCTGCCGTT Atu6020 29981 - 29688 - | hypothetical protein noxB 31096 - 29978 - | D-nopaline dehydrogenase TERM 21 30728 - 30769 + g 85 -2.9 -5.34365 | gap 1 CTCCAGCATCTCGAA GCGATAGTCAGGATGAATGG CAG CCAT-CTTCTCGCCGATCGC TTTTTCTTCTTCTGC TERM 22 30827 - 30813 - G 73 -9.2 -3.99275 | GCACAGAAGAGCAAA CCACCG TTG CGGCGG TACTCCACGTCGACA TERM 23 31881 - 31845 - g 70 -3.6 -4.62783 | gap 1, opp_overlap 31853 31855, overlap 31848 GAGGGATTCGAAAAA CTA-CTGGAACGGCTCG CGCC CGAGCCGGGCGAGGCAG CCTTCCTCATGCACG hyuA 31704 - 33740 + | N-methylhydantoinase A/acetone carboxylase, beta subunit hyuB 33744 - 35699 + | N-methylhydantoinase B/acetone carboxylase, alpha subunit TERM 24 35767 - 35789 + T 91 -11.3 -4.3255 | overlap 35779 AAAGTGCGGCTATTG GGATGCCTC CTCCA GGGGCATCC TTTGTTCATTCAGGA Atu6024 36739 - 35819 - | LysR family transcriptional regulator TERM 25 36161 - 36148 - G 76 -5.9 -4.62069 | GCTTCAGCGCAAAAA CACCG TGCC CGGCG AAATCTGACAATCTC TERM 26 36800 - 36759 - R 100 -12.5 -4.23674 | overlap 36760 36763 GCTCACCAATACAAA GCAACGTAACATTCAAACC CGAA GATTTGAATGCTACGTCGA CATTCGCCTGAGCGC TERM 27 36799 - 36760 - R 93 -16 -3.13722 | overlap 36759 36763 CTCACCAATACAAAG CAACGTAACATTCAAACC CGAA GATTTGAATGCTACGTCG ACATTCGCCTGAGCG TERM 28 36796 - 36763 - R 95 -14.1 -3.69943 | overlap 36760 36759 ACCAATACAAAGCAA CGTAACATTCAAACC CGAA GATTTGAATGCTACG TCGACATTCGCCTGA nocM 37579 - 36854 - | ABC transporter, membrane spanning protein (nopaline) nocQ 38291 - 37581 - | ABC transporter, membrane spanning protein (nopaline) TERM 29 38161 - 38146 - G 74 -3.2 -4.7497 | overlap 38153 38154 CGTAGTGACCAAAAA CGGGAA AGCT TTGCCG CAGCAAAGAGCGAAC nocT 39216 - 38365 - | ABC transporter, substrate binding protein (nopaline) nocP 40054 - 39281 - | ABC transporter, nucleotide binding/ATPase protein (nopaline) TERM 30 40951 - 40921 - g 88 -14.1 -3.6682 | gap 1, opp_overlap 40920, overlap 40922 TTCTACGGATGCAAA CGGACGCCGCA-CT GGAC AGCTGCGGCGTCCA CTGTAATCGCAGGAT TERM 31 40950 - 40922 - g 79 -15.4 -2.79878 | gap 1, opp_overlap 40920, overlap 40921 TCTACGGATGCAAAC GGACGCCGCA-CT GGAC AGCTGCGGCGTCC ACTGTAATCGCAGGA nocR 40362 - 41210 + | LysR family transcriptional regulator Atu6030 41573 - 41214 - | hypothetical protein TERM 32 41618 - 41593 - R 70 -6.9 -4.07687 | opp_overlap 41592 41596, overlap 41596 ATGCTCCCGGGAAAA CAATGTCCTGA TCGA CCAGCACATTG AATTTGTAACCAGGC trbI 42886 - 41570 - | conjugal transfer protein trbH 43375 - 42899 - | conjugal transfer protein TERM 33 43120 - 43136 + g 70 -10.1 -3.47227 | overlap 43130 GGGCAGCTTCCAACG CTTGCCC GAA GGGCGAG TTGTCCTGCTTCAGC trbG 44229 - 43375 - | conjugal transfer protein TERM 34 43655 - 43643 - G 93 -7.7 -4.88228 | ACGGAATAGGAAAAA CTGAG CTG CTCAG CCGGAACGCCGGCGC TERM 35 44204 - 44161 - G 71 -6.6 -4.2361 | gap 1, overlap 44153 AAGAGAAGCCGAAAA CGG-CACGATGACGGCGACGA TCG TTGCAGCAGTCAGCGTGGCCG AAAAACGTCTGAGTT trbF 44909 - 44247 - | conjugal transfer protein trbL 46120 - 44924 - | conjugal transfer protein trbK 46332 - 46114 - | entry-exclusion protein trbJ 47132 - 46329 - | conjugal transfer protein TERM 36 46463 - 46485 + gr 71 -6.2 -4.2349 | overlap 46461 CCATCATCGTCATCT GCTGCGAG ACGAGCC CGCGCAGC TTTTGCATCTGCGCC trbE 49572 - 47104 - | conjugal transfer protein TERM 37 48987 - 49011 + gr 81 -12.7 -3.14647 | opp_overlap 48975, overlap 48989 ACAGCTCGTCGTAGC GCGCGCGGCGG AAA CCGCCACGCTC TTGCGTCTCCTGGGT TERM 38 48989 - 49009 + gr 84 -13.9 -3.13299 | opp_overlap 48975, overlap 48987 AGCTCGTCGTAGCGC GCGCGGCGG AAA CCGCCACGC TCTTGCGTCTCCTGG trbD 49882 - 49583 - | conjugal transfer protein trbC 50276 - 49875 - | conjugal transfer protein trbB 51237 - 50266 - | conjugal transfer protein traI 51869 - 51234 - | autoinducer synthesis protein TERM 39 52221 - 52179 - H 76 -12.1 -3.09635 | overlap 52193 ACCCGCATTAGGTAA TCGTCACGGATAAATGGCA ATACG CGCCAATTAACCGTGACAA GAGATAACACCGTGA TERM 40 53014 - 53024 + G 70 -3.2 -4.70659 | TCATCGACTGCCCTC CTCA GCT TGGG TTTTTGACTCTCAGC repA 52233 - 53450 + | replication protein A TERM 41 53497 - 53476 - f 79 -13.1 -2.87132 | opp_overlap 53472 53470 TGCGTTCCTCACAGA TCTGTTGGG AGCT CCCAACAGA CAGGTGTTGATTCGC TERM 42 53659 - 53643 - g 74 -3.5 -4.86621 | overlap 53625 53644 ATTTGCAATCAAAAA TGCGACG CCA CGACGCC AAACCCAAGAGGCCG repB 53578 - 54690 + | replication protein TERM 43 54790 - 54752 - f 83 -9.6 -4.13767 | overlap 54758 GCTCTCACCGCAAAA GAAAAAGGCCCCCGAAAC GGC GTTCCGGAAGACCTTCTC TGTAGTCTCGCAGCT TERM 44 54784 - 54758 - f 100 -7.2 -5.46706 | overlap 54752 ACCGCAAAAGAAAAA GGCCCCCGAAAC GGC GTTCCGGAAGAC CTTCTCTGTAGTCTC TERM 45 55408 - 55393 - g 88 -3.2 -5.47399 | opp_overlap 55406 GCAAGCTGAAAAAAA GGCC TTCCGGGT GGCC AAGGAGCGCTTGACT repC 54905 - 56224 + | replication protein C Atu6046 57345 - 56233 - | DNA invertase TERM 46 56682 - 56695 + g 76 -9.5 -4.09685 | CGGTCATCCTTGCCA GCGCC TCCG GGCGC TTTTCCCGGATGCCC TERM 47 58180 - 58209 + G 77 -11.4 -3.64599 | opp_overlap 58194, overlap 58184 GTGAATTCATATTTC CGGGTGCGCGGA AAGGTG TCCTCGCACCTG TTTGGCATCTGCTCC Atu6047 57457 - 58566 + | hypothetical protein Atu6048 61257 - 58747 - | hypothetical protein TERM 48 60569 - 60553 - G 74 -6.5 -4.41616 | overlap 60549 60555 ATGCTGTGAAAGAAA TTCCCGA ACT TCGGGGA CCTTGGACAGCCAAG Atu6049 62647 - 61460 - | hypothetical protein Atu6050 62881 - 63597 + | hypothetical protein Atu6051 63606 - 64190 + | hypothetical protein Atu6052 64358 - 65185 + | hypothetical protein TERM 49 65338 - 65324 - g 75 -2.1 -4.99134 | gap 1, opp_overlap 65327 65329, overlap 65326 ATCTCAAATGAAAAA GTGCCG CTCG CGG-AC CTGGACGACTATGTA Atu6053 65282 - 65686 + | hypothetical protein Atu6054 66107 - 65715 - | hypothetical protein TERM 50 65929 - 65905 - G 74 -4.1 -4.75472 | overlap 65907 GGGACAGCAAGAAAA GTTCCCGTCAC GAT GCAACGGGTGC TGCCCCTTACAGTGG gcvA 67327 - 66431 - | LysR family transcriptional regulator TERM 51 66733 - 66746 + g 71 -9.5 -3.767 | GCAACCAGTCTGGTT CCGGC GAGG GCCGG TTTCGTCCGTCGATA phzF 67445 - 68317 + | phenazine biosynthesis protein Atu8055 68622 - 68359 - | hypothetical protein ssuC 68748 - 69689 + | ABC transporter, membrane spanning protein (nitrate/sulfonates) ssuB 69686 - 70489 + | ABC transporter, nucleotide binding/ATPase protein (nitrate/sulfonates) ssuA 70516 - 71478 + | ABC transporter, substrate binding protein (nitrate/sulfonate) TERM 52 71823 - 71800 - g 100 -18.2 -3.97307 | opp_overlap 71822 TGGATCCAACAACAA TCCTGGCCGC GCTG GCGGCCAGGA CCGAGCAGATCGGGC Atu6060 71649 - 72524 + | nitrilotriacetate monooxygenase TERM 53 72777 - 72789 + G 71 -9.1 -3.72576 | opp_overlap 72777 CGGTCGCTCAAGCAA CCGAG AAT CTCGG TTTCATCGCCACGGG TERM 54 72803 - 72844 + G 84 -10.1 -4.14392 | gap 1, overlap 72795 GGTTTCATCGCCACG GGCTC-GGCGATCTTCTCCG ATC CGGTTGAGATCGCCCGGGTC TTTTCGACCTTCGAC Atu6061 72521 - 73768 + | nitrilotriacetate monooxygenase TERM 55 74517 - 74480 - g 72 -13.5 -2.52635 | gap 1, opp_overlap 74493, overlap 74479 ACCTTCAGGACTAAG GGTCAATG-CCATAGCGC CCG GCGCTATGGTCACCGTCC TGACTGAAAAGCTGC kduD 73926 - 74696 + | 2-deoxy-D-gluconate 3-dehydrogenase Atu6063 74856 - 76481 + | GMC family oxidoreductase dha 77458 - 76616 - | haloalkane dehalogenase TERM 56 77023 - 76993 - G 71 -7 -4.18697 | gap 1 AAAACCAGGGGAAAA GCTCAGTCAGGAA GCGGTT TTCCTG-CTGAAC GAAGATTTCACCTTC TERM 57 77146 - 77126 - G 70 -4.5 -4.57073 | opp_overlap 77126, overlap 77128 CACTGGCTCGAAAAA GGCCACGGC TCG GACGCGGTC TGGATTCCGGCTGGC Atu6065 78150 - 77527 - | hypothetical protein acd 79495 - 78290 - | acyl-CoA dehydrogenase Atu6067 80118 - 79549 - | hypothetical protein TERM 58 80047 - 80030 - G 78 -9.9 -3.97042 | TGACGATCAACTAAA GCCTGAA TATC TTCAGGC AGTTCGGATTCGTCC rbsC 81309 - 80275 - | ABC transporter, membrane spanning protein (ribose) rbsA 82906 - 81320 - | ABC transporter, nucleotide binding/ATPase protein (ribose) TERM 59 82576 - 82586 + g 71 -6.8 -4.25104 | opp_overlap 82574 82575 TCAGCACCCCAAAGC GCGT GAA ACGC TTTTCATGGCCGAGG TERM 60 82693 - 82725 + g 72 -11.1 -3.28684 | opp_overlap 82690 CCTCGTAATAATTTT CCAGGGCGACCGGCG TGC CGCCGATCGCTACGG TTCCTCTGGATGGTT rbsB 84210 - 82903 - | ABC transporter, substrate binding protein (ribose) TERM 61 84064 - 84054 - G 74 -6.8 -4.30576 | opp_overlap 84061 TGCTCAGCAGCAAAA GCTG ATG CAGC GGAGCGGATTTAAAA aiiB 85174 - 84344 - | Zn-dependent hydrolases Atu6072 86468 - 85254 - | acyl-CoA dehydrogenase dfpA 88152 - 86557 - | ABC transporter, substrate binding protein (peptide) TERM 62 86732 - 86751 + g 78 -10.8 -3.88583 | TCTTTGCGCTTCGCC GGATCGAT TTCG ATCGATCC TTTCTCGAAGATTTC TERM 63 87972 - 87988 + g 72 -11.5 -3.30159 | opp_overlap 87972 TGACACGGGAACCGA CGCCGGC GTT GCCGGTG TTCTGGAACAATTCG dfpD 89877 - 88210 - | ABC transporter, nucleotide binding/ATPase protein (peptide) dfpC 90818 - 89877 - | ABC transporter, membrane spanning protein (peptide) dfpB 91819 - 90818 - | ABC transporter, membrane spanning protein (peptide) Atu6077 93288 - 91801 - | monooxygenase TERM 64 93074 - 93054 - G 79 -8.9 -4.18018 | overlap 93055 TGGCGGCATCGAAAA CCTGCACCC GTC GGATGCCGG CACGGCGCAGTCCAA Atu6078 94525 - 93299 - | hypothetical protein Atu6079 95814 - 94522 - | putative nitrilotriacetate monooxygenase TERM 65 96169 - 96155 - g 70 -10 -3.44229 | AGCGTACGACGAGAA CGGTCA GAT TGACCG AAGCTGGAAGTCGAT TERM 66 96294 - 96304 + G 71 -8.2 -4.03234 | overlap 96286 96300 TTGCGTCCCGCGTAT GCCG ATG CGGC TTTATATGGAACCGC Atu6080 95986 - 96948 + | LysR family transcriptional regulator Atu6081 97030 - 97623 + | hypothetical protein TERM 67 97815 - 97791 - f 75 -5.7 -4.64657 | CGAAAGTGCCAAAAA GTCACCGCG AGAGGGA CACGATGAC GCAAATGTGGACCAT Atu6082 97822 - 98859 + | AAA ATPase family protein TERM 68 101082 - 101055 - g 78 -13.4 -3.14132 | gap 1 CTTGCGTCGCATCAA TGCC-GCGGCCGG GGC CAGGCCGCCGGCA AGGGCGGCGGGAGAT Atu6083 98863 - 101373 + | hypothetical protein TERM 69 101718 - 101688 - f 74 -9.8 -3.61946 | overlap 101686 GATTGTATATAAATA GTCTTCCTGAGA ATGATTA TCTCAGGAAGGC GTACGGATGCATCTC Atu6084 101725 - 103077 + | nitrilotriacetate monooxygenase, component A Atu6085 103100 - 104032 + | ABC transporter, substrate binding protein (nitrate/sulfonate) TERM 70 104194 - 104245 + G 78 -15.9 -2.57344 | gap 2, overlap 104194 CCAAGGCATTCTTCC GTCGCCGCTCGCCGTCCTGGAGGCC GCCT GGTCTCT-GG-CGGCAAGCGGCGAG CTTGTGCAGCACATG TERM 71 104194 - 104246 + G 89 -15.7 -3.29144 | gap 3, overlap 104194 CCAAGGCATTCTTCC G-TCGCCGCTCGCCGTCCTGGAGGCC GCCT GGTCTCT-GG-CGGCAAGCGGCGAGC TTGTGCAGCACATGG nrtB 104051 - 104851 + | ABC transporter, membrane spanning protein (nitrate/sulfonate) nrtC 104900 - 105679 + | ABC transporter, nucleotide binding/ATPase protein (nitrate/sulfonate) Atu6088 105676 - 106623 + | LysR family transcriptional regulator Atu6089 106655 - 107842 + | hypothetical protein Atu6090 108998 - 107937 - | ATP-dependent DNA ligase TERM 72 108922 - 108974 + g 87 -10.4 -4.34402 | overlap 108924 GGTTGAGCTGGATTA CGCTTCCTGCGAGGCTTTGAGCGG ATCGG CGGCTCGGTGTCGCGCAGGAGGGG TTTTGATCTCGGAGG Atu6091 109282 - 110034 + | hypothetical protein TERM 73 111015 - 110993 - g 81 -7.7 -4.60487 | GAGGAGCGCCAAAAA TCCTCCTCG CTGGT CGAGGACGA GGTCACCGACGTCAC Atu6092 110048 - 111466 + | hypothetical protein TERM 74 111501 - 111532 + G 72 -13 -3.01712 | CACAACGCACTTTTC CTTCCTGCGCGGAG CAAG CTCGGCGCAGGAAC TGTTCGAGACCGCCA TERM 75 112387 - 112397 + G 71 -5.4 -4.39828 | opp_overlap 112387 ATCCGTACCATGAAA TACG CCC CGTA TTTTCTGACCGTCTT TERM 76 112671 - 112653 - g 89 -10.2 -4.5954 | CTATACCAGAGAAAA GGCAGCGC TCT GCGCCACC GTGACGCGCTACCGG dnaE 111463 - 114726 + | DNA polymerase III, alpha chain Atu6094 114961 - 116079 + | hypothetical protein TERM 77 116355 - 116335 - T 72 -11.9 -2.78384 | opp_overlap 116334, overlap 116340 CGGCCTCTGAGGAGA GCAGATCTC GGC GAGATCCGC ATTCGCTATAAGGTT Atu6095 116774 - 116361 - | hypothetical protein TERM 78 116766 - 116782 + g 79 -12.3 -3.44553 | GAATACGTTCCGGGC GGGTCTC ATT GAGACCC TTCTCGCCTTTTTGG Atu6096 116838 - 117917 + | hypothetical protein fic 118474 - 117878 - | cell filamentation protein Atu6098 118932 - 118471 - | transcriptional regulator Atu6099 119313 - 119915 + | hypothetical protein Atu6100 119927 - 120328 + | hypothetical protein TERM 79 123037 - 123051 + G 100 -12.8 -4.63048 | CATCTCAAACTTCCA GGCGCC TCA GGCGCC TTTGTTCTTTATGGA Atu6101 120457 - 125538 + | SNF2 family helicase TERM 80 127567 - 127541 - g 85 -12.2 -3.8211 | CTTGATGGAGAAGAA GGCCTCGCCGCC CCC GAAGACGAGGCC GATCTTCCAGACATC parB 125894 - 127651 + | plasmid partitioning protein TERM 81 127677 - 127717 + F 100 -15.5 -3.54424 | gap 2, opp_overlap 127680, overlap 127683 127684 CCTTCCCCTTCCGAA CGATTGTCCGCCGCCGGTG ATTTC CACCGGCGGCGG-CT-TCG TTTCCAGCCCTAAAG TERM 82 127715 - 127680 - f 79 -13.2 -2.70932 | gap 1, opp_overlap 127677 127683 127684 TCCCCTTCCGAACGA TTGTCCGCCGCCGGTGA TTT CCACCGGCGGCGG-CTT CGTTTCCAGCCCTAA TERM 83 127683 - 127713 + F 100 -19.7 -3.51411 | opp_overlap 127680, overlap 127677 127684 CCTTCCGAACGATTG TCCGCCGCCGGTG ATTTC CACCGGCGGCGGC TTCGTTTCCAGCCCT TERM 84 127684 - 127712 + F 100 -23.2 -2.70525 | opp_overlap 127680, overlap 127683 127677 CTTCCGAACGATTGT CCGCCGCCGGTG ATTTC CACCGGCGGCGG CTTCGTTTCCAGCCC Atu6104 127748 - 128221 + | hypothetical protein TERM 85 128255 - 128272 + G 95 -14.1 -4.13341 | ACACGCCCGACTGCA CCCCCGG ATTT CCGGGGG TTTCCTTTGGTCTGT Atu6105 128218 - 129105 + | hypothetical protein Atu6106 129102 - 129410 + | hypothetical protein Atu6107 129382 - 129606 + | hypothetical protein phnA 129931 - 129626 - | alkylphosphonate uptake protein TERM 86 129812 - 129841 + g 78 -4.9 -4.77757 | gap 1, opp_overlap 129811, overlap 129828 GCCATCGGCCAACAC GTTGCCGGAG-GCG TCG CGCACTTCTGCGGC TTTTGCTTTTTCGGC TERM 87 130108 - 130124 + H 74 -7.9 -4.1899 | GGACCAGTTTGCAGG TGCGGGC CTG GCGCGCA TTTTGAATGACCTCC TERM 88 130324 - 130275 - H 100 -13.5 -4.36914 | gap 1, opp_overlap 130274 130277 CCGCTCTCGACAAAA CAGGCACGCGGGCTTCGCAGAACC GTG GGTTCCGCTT-GCCCGCCCACCTG CTTCGCTCGATCAGG TERM 89 130361 - 130374 + H 83 -9.5 -4.17048 | CGGACCCTGAACCGC CCGGC TTGC GCCGG TTCTTTTCGACCGCA TERM 90 130416 - 130403 - H 71 -9.5 -3.60661 | CACCGAAGGACAGAA CGGCC AAGG GGCCG AACGCTTCGGGCAAA Atu6109 130449 - 131048 + | hypothetical protein TERM 91 131058 - 131078 + F 91 -14 -3.14132 | opp_overlap 131032 GGCTGAGACGTCTCC GGCGGAGC ATCCA GCTCCGCC TTCGTCGGGACGAGG TERM 92 131091 - 131115 + F 100 -12.8 -5.36441 | overlap 131092 GCCTTCGTCGGGACG AGGCCGCCTC ACTCC GAGGCGGCCA TTTTTTGTGTCGCCG TERM 93 131092 - 131114 + F 100 -16.3 -3.81141 | overlap 131091 CCTTCGTCGGGACGA GGCCGCCTC ACTCC GAGGCGGCC ATTTTTTGTGTCGCC TERM 94 131308 - 131352 + F 71 -9.9 -3.57144 | gap 2 GCTCCTGCTTTCGGC CCTCCGCGAC-GG-GGCCGCG ATGGG CGCGGCCTCCTGAAACGGAGG TTTGGAAATGAGCAG ardC 131360 - 132286 + | antirestriction protein Atu6111 132286 - 133200 + | hypothetical protein TERM 95 133779 - 133768 - g 71 -7.2 -4.15044 | overlap 133769 TCGCGGGCCAAGAAA GCCG CTCC CGGC CGTCCTCCACTTCGT Atu6112 133562 - 134212 + | hypothetical protein TERM 96 134223 - 134248 + T 100 -10.4 -5.02231 | opp_overlap 134225 CCTGATCACCCAGAG GAGCTCCGCT CGACAA GGCGGGGCTC TTTTTCGTCTTTTTC Atu6113 134882 - 134304 - | hypothetical protein TERM 97 134523 - 134537 + g 76 -10 -3.79668 | AACGTCGTGTCCACC CTTCGC AAC GCGAAG TTTGATACGTTCGAT Atu6114 135138 - 134896 - | hypothetical protein apeA 136625 - 135219 - | hypothetical protein ycf 137539 - 136688 - | hypothetical protein TERM 98 137513 - 137497 - G 71 -7.3 -4.16943 | GCTGAGATGCCAAAA TTCCCTC GGC AAGGGAA ACAGAAGTATGATGA Atu6117 137671 - 138156 + | MutT family NTP pyrophosphatase TERM 99 138422 - 138451 + F 70 -7.1 -4.1822 | gap 1, overlap 138423 GACGCCTTCGTCTCG ATCGCCT-TGGCCG CAA CGGCCATACGCGAC TTTCTTCCCCTGCAA TERM 100 138508 - 138497 - f 74 -7.2 -4.15044 | overlap 138498 TCGCGGGCCAAGAAA GCCG CTCC CGGC CGTCCTCCACTTCGT Atu6119 138585 - 138941 + | hypothetical protein TERM 101 138952 - 138975 + T 100 -16 -4.34402 | opp_overlap 138954 CCTGATCACCGCAAC GAGCTCCGCC GAAA GGCGGGGCTC TTTTCGTGTCGCGAG TERM 102 138996 - 139026 + T 100 -16.1 -4.14243 | GTGTCGCGAGGGAGA GCCGGGCGCAGGC ATCGA GCCTGCTTCCGGC TTTTCCGGTGCCATA TERM 103 139348 - 139314 - T 71 -12.1 -2.52933 | gap 1, overlap 139292 139313 GCCGAATTCAGGAAT GCCTGCGATCCGGCCG AGCG CCGCCGGATTGC-GGC GGAGCTGGAGATGGT TERM 104 139418 - 139435 + T 72 -11.3 -3.10715 | opp_overlap 139400, overlap 139400 ACGCATCAGCGCGGA GCCTCCT TTCT AGGAGGC TTCCATCATGCTGCC hupT 139750 - 139472 - | HNS-type DNA binding protein ych 140147 - 139890 - | hypothetical protein yci 140701 - 140387 - | nuclease Atu6123 141252 - 140854 - | hypothetical protein traG 143225 - 141249 - | conjugative transfer protein, coupling protein TERM 105 142039 - 142019 - G 73 -9.7 -3.87815 | opp_overlap 142019 142037, overlap 142029 CCGCATTGGCATAAA CACCGGAAA ACG TCTCCGGCG TCATGTTGACGAACA traD 143457 - 143212 - | conjugative transfer protein, Dtr system TERM 106 143249 - 143266 + gr 75 -11.3 -3.44284 | overlap 143248 GCCTCCGCGCCGATG GCGGTCA AGCG TGACCGC TCTTCTTCGTCGCCC traC 143728 - 143432 - | conjugal transfer protein, Dtr system TERM 107 143947 - 143976 + H 70 -7.1 -4.08767 | gap 1 CACTGTGGCCTCACC GCTCCCG-ACGAAC GAC GTTCAAACGGGAGC TTTTACCGCCGTGGC TERM 108 145419 - 145395 - g 100 -9.9 -4.77165 | TGCTCGACAATAAAA CCGTCTTCGTC ATG GACGAGGCCGG CATGGTGGCCTCGAA TERM 109 146788 - 146764 - g 78 -13.5 -3.14344 | TATTCTGGCCAGCAA GACGGAGCGCG AAG CGCGCCGCGTC GCAGAGGTCAATGTT traA 143987 - 147289 + | OriT nicking enzyme, Dtr system TERM 110 147677 - 147702 + G 74 -7.5 -4.40605 | gap 1, overlap 147680 147680 GGGCGATCGCGCCCT TCGCCGGCGGCG TCG TGCCGCCAG-GA TTTCTATTTCTCCAT traF 147286 - 147816 + | conjugative pilin processing protease traB 147905 - 149002 + | conjugal transfer protein TERM 111 149326 - 149314 - g 70 -4.7 -4.55826 | opp_overlap 149315, overlap 149315 GCGAAAACATCAAAA TGGGC ACG GCCCT GTTCGCCAAAGTCTA traH 149016 - 149645 + | hypothetical protein traM 150171 - 150479 + | TraR antiactivator mcpA 152377 - 150638 - | methyl-accepting chemotaxis protein TERM 112 150815 - 150833 + g 73 -4.4 -4.72029 | overlap 150817 150827 GCTGGCCGCCGTCTG CTCCTCGA CCA TCGCGGCG TTTTGTTGCGTTCCC Atu6133 152809 - 152480 - | hypothetical protein TERM 113 152740 - 152717 - G 70 -3.8 -4.66609 | CAGGCTATCGAAAAA CTGAACGG TGGTGTGC CCGTGCAG CCAGTGCGCCTGATC traR 153543 - 152839 - | transcriptional regulator TERM 114 153106 - 153143 + g 70 -10.7 -3.53012 | gap 2 GGCGCCCGCGGCTGC GGCC-GCG-TCGATCTC ACGGTC GAGGTCGATCGCCGGCC TTTCCGACGCCAGCG Atu6135 155218 - 153761 - | sucrose phosphorylase-like protein Atu6136 156922 - 155270 - | Na+/phosphate symporter TERM 115 156065 - 156041 - G 76 -9.2 -4.12599 | opp_overlap 156041 156040 156038 AAGAAGGCGGGAAAA CGGCATGGCC AGGAG AGCCAGGCCG ATATTTAACGCGAGA TERM 116 156155 - 156127 - G 80 -11.8 -3.76373 | gap 1, overlap 156142 156144 CCGGCAACATCGAAA GCCAGCTGGCCAA AATA TCGGCCA-CTGGC AGGATCAGCAGGCAG Atu6137 157232 - 156936 - | hypothetical protein TERM 117 157075 - 157113 + g 76 -14 -3.01791 | gap 1, opp_overlap 157100 TGCGGTTGATGAGGG TGCCGGTGGGCGAGC AGGGAGGAGA GCT-GCCCACCGGCA TCTTGCCCGCGCCGT accR 157464 - 158240 + | repressor of the acc and Arc operons TERM 118 158488 - 158509 + G 81 -5.1 -5.00616 | gap 1, opp_overlap 158487 TCGTCAACCAGATAT TCGACACGCT GAT AGCGCG-CGA TTTTTTCGCGAAGGG TERM 119 158724 - 158713 - g 81 -5.8 -4.731 | opp_overlap 158720 AAGCGATCAAGAAAA TCCC GCTT GGGA AATCCTATTCGCTTG accA 158298 - 159863 + | ABC transporter, substrate binding protein (agrocinopines A and B) TERM 120 159908 - 159880 - f 84 -13 -3.41878 | CTCGTTAATCGAGAA GGCGGCGCGCGC GAGAT GTGCGCGTCGCC CTGGAGGAGCCTAAG accb 159963 - 160862 + | ABC transporter, nucleotide binding/ATPase protein (agrocinopine) accC 160859 - 161878 + | ABC transporter, nucleotide binding/ATPase protein (agrocinopine) accD 161875 - 162801 + | ABC transporter, membrane spanning protein (agrocinopine) accE 162794 - 163654 + | ABC transporter, membrane spanning protein (agrocinopine) accF 163670 - 164470 + | agrocinopine phosphodiesterase accG 164463 - 165281 + | arabinose phosphate phosphatase TERM 121 165294 - 165264 - f 76 -9.7 -3.85698 | gap 2 CCGTTGCTCGATAAA GTGGCGCTGGCCGCA TAA TGCGGC--GCGCCTC TGACAATAACGGTCA TERM 122 165486 - 165460 - g 74 -3.6 -4.7373 | overlap 165485 GGAGGGCAGGAAAAA GCTTCATCGAGT CGC ACGGGAGGAAGC TTGGGAAGAAGCCGG Atu6146 165281 - 165739 + | hypothetical protein tnp 167382 - 166498 - | transposase Atu6147 165760 - 166743 + | hypothetical protein Atu6149 167545 - 167880 + | hypothetical protein virH1 167883 - 169142 + | P-450 monooxygenase virH2 169219 - 170394 + | P-450 monoxygenase tnp 170670 - 171593 + | transposase Atu6153 171946 - 171677 - | hypothetical protein TERM 123 173148 - 173116 - g 78 -10.6 -3.88232 | gap 1, opp_overlap 173116 173118, overlap 173118 GCTCGCATACAACAA GAGAGGAG-CAGCCG TCCG CGGCTGTCTCCCCTG TTTGGCCGAGCCATA TERM 124 173118 - 173146 + G 72 -11 -3.34398 | gap 1, opp_overlap 173116 173118, overlap 173116 TCGCATACAACAAGA GAGGAG-CAGCCG TCCG CGGCTGTCTCCCC TGTTTGGCCGAGCCA TERM 125 173146 - 173118 - g 86 -13.2 -3.52874 | gap 1, opp_overlap 173118 173116, overlap 173116 TCGCATACAACAAGA GAGGAG-CAGCCG TCCG CGGCTGTCTCCCC TGTTTGGCCGAGCCA virF 172489 - 173427 + | exported virulence protein TERM 126 173983 - 174005 + G 71 -6.2 -4.3586 | GCGATAGTGCAACGG CGCGGCCC GCCTCCG GGGTTGCG TTTTGCTGTCCGTGA Atu6155 173878 - 174306 + | hypothetical protein virK 174328 - 174762 + | virA/G regulated gene Atu6157 174806 - 175120 + | hypothetical protein Atu6158 175481 - 175161 - | hypothetical protein Atu6159 175895 - 175611 - | hypothetical protein ynh 176065 - 176244 + | hypothetical protein TERM 127 176491 - 176524 + F 90 -16.9 -2.76171 | overlap 176488 CCGTGTCAGCGATAC GCCCTGTCACCAA CTTAACCT TTGGTGACAGGGC TAATATTCAATAGAT Atu8063 176512 - 176823 + | hypothetical protein Atu6162 178117 - 177407 - | hypothetical protein Atu6163 178336 - 178764 + | hypothetical protein tzs 179993 - 179262 - | trans-zeatin secretion protein TERM 128 179909 - 179920 + g 74 -7.2 -4.33851 | opp_overlap 179900 179909 GATCAAGGGCAACCA CCGG CCAC CCGG TTTCTTGTGCGATTT Atu6165 180279 - 180470 + | hypothetical protein TERM 129 182931 - 182948 + G 78 -2.6 -5.02476 | opp_overlap 182930 182931, overlap 182933 CCTTCCTCGAAGAAG CCCGTC AGCCCG GACGCG TTTTTTGGGCCCTGT TERM 130 183244 - 183264 + G 72 -2.4 -4.82901 | AAATGTCACTTTCCA GCGATGAC ATGAC GTCCGCGC TTTTTCTGCCCAAAC virA 180831 - 183332 + | two component sensor kinase virB1 183877 - 184614 + | component of type IV secretion system virB2 184614 - 184979 + | component of type IV secretion system, pilin subunit virB3 184979 - 185305 + | component of type IV secretion system TERM 131 185466 - 185481 + G 71 -9 -3.76379 | opp_overlap 185460 TGCCGAAATGCGCAA TGCACG TTGC CGTGCA TTTAATACGCTCTTG TERM 132 186949 - 186966 + G 78 -2.6 -5.10461 | overlap 186950 CCCCACATGCGCTCA ATCGCG GGGTTA CGCGAA TTTTTGTTGCATGGA virB4 185305 - 187674 + | component of type IV secretion system virB5 187691 - 188353 + | component of type IV secretion system virB6 188454 - 189341 + | component of type IV secretion system virB7 189377 - 189544 + | component of type IV secretion system virB8 189531 - 190244 + | component of type IV secretion system virB9 190241 - 191122 + | component of type IV secretion system TERM 133 191304 - 191289 - g 81 -8.2 -4.67123 | TGAAAAGAAGGAAAA CGGGGA CGCA CCCCCG TCAACCATGATCGCC TERM 134 192147 - 192163 + G 72 -2.1 -4.82901 | opp_overlap 192147, overlap 192148 CCTGAAGAAGAATCA GGGCGAC ACG GTCTCCA TTTTTGTCGCACGGG virB10 191119 - 192252 + | component of type IV secretion system virB11 192293 - 193327 + | component of type IV secretion system TERM 135 193609 - 193627 + G 74 -11 -3.42078 | CTTGTCATCGATGAC GATGTCGC TAT GCGGCATC TTATAGTCGAGTATC TERM 136 193856 - 193874 + G 70 -3.9 -4.63218 | gap 1 ACAAAGTTATTGCGC TCGAGTTG GGAG CAAC-CGA TTTTATTGCCAAGCC virG 193546 - 194307 + | two component response regulator TERM 137 194419 - 194405 - T 73 -5.6 -4.63527 | opp_overlap 194405 GTACTATCCGAAAAA CTCAGC ACT GCGGAG TGATTGGATGGGTCC virC2 195057 - 194449 - | virA/G regulated protein virC1 195755 - 195060 - | virA/G regulated protein virD1 196026 - 196469 + | virA/G regulated topoisomerase virD2 196503 - 197846 + | endonuclease TERM 138 198175 - 198162 - g 90 -5.2 -5.40072 | opp_overlap 198141, overlap 198163 TTTTGCGGAAAAAAA GCGG TTCTTT CCGC ACCGGTATGCAGTAT TERM 139 199155 - 199140 - g 73 -4.7 -4.62471 | CCGAACTGGCAAAAA TCGAC GCACTA GTCGA ATCTCACTCCAACAG virD3 197861 - 199882 + | virA/G regulated protein TERM 140 200010 - 200020 + G 70 -4.6 -4.56597 | overlap 199988 AGCATCGTATGTTCG CTGG CAG CCGG TTTTTGCGCGGCAAG TERM 141 200519 - 200529 + G 75 -8.2 -4.21936 | opp_overlap 200515, overlap 200517 AGCACGCAAAGCGGG CGGC GAC GCCG TTTTCAAGTTCTCGC virD4 199956 - 201962 + | virA/G regulated protein TERM 142 203085 - 203069 - g 81 -13.7 -3.38316 | CTATGATGGAATGAA GCTCGGG GAA CCCGAGC ATGCTGCATACGAGA virD5 202074 - 204596 + | virA/G regulated protein virE3 204666 - 205232 + | virA/G regulated protein TERM 143 205272 - 205291 + F 71 -10 -3.60098 | GTCCGTGCCAATACG TCTCCGGC AAGA GCTGGAGA TTTGGCATGGCGGAT virE0 205684 - 205935 + | virA/G regulated protein virE1 206051 - 206242 + | protein secretion chaperone TERM 144 207010 - 207000 - g 74 -3.2 -4.85433 | AGAGAAATTCAAAAA CGCT ATG AGCA CCAGTTTCAAGCTGG virE2 206256 - 207926 + | exported virulence protein TERM 145 208143 - 208115 - g 70 -10.3 -3.54902 | overlap 208111 GGAGGCAACAAGGAA TCTAGCCCGGC TCGAAAC GCCGGACCAGA AGCGAAAATATGTCG TERM 146 209405 - 209393 - g 95 -4.8 -5.63374 | overlap 209382 GCAAGAGGAAAAAAA CCTC AGTGA GAGG CGGGGAAATCTCTTC virE3 207993 - 210047 + | virA/G regulated protein TERM 147 211073 - 211097 + T 72 -12.2 -2.72031 | overlap 211069 TAGGTTGATTGCCAC TCGCGGTGAT AGTTG GTCACCGCGA TGATATGCTTGTGCT Atu6193 211946 - 211215 - | hypothetical protein TERM 148 211634 - 211608 - G 91 -13.7 -3.85817 | ATCGGCGCGCAGAAA GCCCGCGTGCT GGACG AGAACGCGGGC GTCGATGCTGTCGCA Atu6194 212497 - 211970 - | hypothetical protein Atu6195 212684 - 212487 - | hypothetical protein accG 213429 - 212701 - | arabinose phosphate phosphatase accF 213755 - 213471 - | agrocinopine phosphodiesterase