TransTermHP v2.07 (built on Jan 21 2009) 25 bins; sample size is 20000000 --pval-conf=/fs/szasmg2/carlk/TTupdate2/expterm.dat --gc=-2.3 --au=-0.9 --gu=1.3 --mm=3.5 --gap=6 --max-len=59 --min-stem=4 --max-loop=13 --min-loop=3 --uwin-length=6 --uwin-require=3 --max-hp-score=-2 --max-tail-score=-2.5 --loop-penalty=1,2,3,4,5,6,7,8,9,10,11 --start-cut=0 --end-cut=25 Genes: 0.542223 %AT, 3700653 nt, 26497 terms. Intergenic: 0.597906 %AT, H2T: 443217 nt, 3610 terms; T2T: 133948 nt, 2902 terms; H2H: 213473 nt, 2900 terms. Each terminator entry starts in column 3 and is of the form: term # start - end +/- regionconf hp tail | notes Followed by the sequence of the 5' tail, 5' stem, loop, 3' stem, and 3' tail. Genes are interspersed, and start the first column. SEQUENCE gi|196154825|ref|NC_011138.1| Alteromonas macleodii 'Deep ecotype', complete genome (length 4412282) MADE_00001 689 - 552 - | hypothetical protein MADE_00002 759 - 2360 + | Chromosomal replication initiator protein dnaA TERM 1 2909 - 2921 + G 72 -9.1 -3.50335 | opp_overlap 2909, overlap 2903 CGTACCGTTGCAACA GACGG TCA CCGTC TTGCTCTTTGTCGCC MADE_00003 2393 - 3493 + | DNA polymerase III, beta subunit TERM 2 3595 - 3566 - g 74 -10.8 -3.2281 | opp_overlap 3566, overlap 3569 AAATTATCAATTCAA GAAGCGATGAGT GTTGAT ACTCCTCGCTTC TTTTCTTTCATCAGT TERM 3 3566 - 3595 + G 100 -11.5 -4.9448 | opp_overlap 3566 3569 AAATTATCAATTCAA GAAGCGATGAGTG TTGA TACTCCTCGCTTC TTTTCTTTCATCAGT MADE_00004 3509 - 3622 + | hypothetical protein TERM 4 3639 - 3625 - f 80 -10 -3.74693 | TGTGACCTCATGAAA CTGGAC CGC GTCCAG ATTACACAGTTTCGT MADE_00005 3691 - 4707 + | Recombinational DNA repair ATPase TERM 5 5922 - 5940 + G 70 -8.8 -3.30474 | opp_overlap 5918 GGCGCACTAGACTTA GCTGGCCT GCC AGGCAAGC TTGCTGATTGTCAGG MADE_00006 4716 - 7136 + | DNA gyrase subunit B TERM 6 7166 - 7181 + T 100 -10.4 -6.11644 | opp_overlap 7165 7164 AATCTTTTTCAAAGG CGACCC GACA GGGTCG TTTTTTTTTGCGTGA MADE_00007 7816 - 7346 - | hypothetical protein TERM 7 7829 - 7811 - G 100 -8.1 -5.28176 | opp_overlap 7806 7811 7817 TCCATTTATAAAAAA GCCCAAC GTGAA GCTGGGC TTTTCGTTTCTACGG TERM 8 7811 - 7829 + g 74 -5.9 -4.61873 | opp_overlap 7811, overlap 7806 7817 TCCATTTATAAAAAA GCCCAAC GTGAA GCTGGGC TTTTCGTTTCTACGG MADE_00008 9950 - 7872 - | hypothetical protein TERM 9 9468 - 9452 - G 71 -8 -3.85698 | CTTCGCTTCCATAAA GCACAC AAAGG GTGTGC ACAGGGCGAATAAAC TERM 10 9795 - 9785 - G 72 -8.2 -3.71378 | GACCTGACACGTAAA CCGC TAA GCGG CGAGGGGCTGCAAAC MADE_00009 10858 - 9953 - | glycyl-tRNA synthetase beta subunit TERM 11 11043 - 11033 - g 75 -3.2 -5.20633 | AAAAATAGAGAAAAA GCAG CCG CTAC ACCGGTGTGGATGGG MADE_00010 11004 - 11612 + | constitutive 3-methyl-adenine DNA glycosylase I TERM 12 11667 - 11643 - T 100 -10 -5.67283 | AATTCAAATAAAAAA GGCCGAGCAC ACTAA GTACTCAGCC TAAATCTTCTTCTAT MADE_00011 12166 - 11699 - | hypothetical protein MADE_00012 12688 - 12185 - | hypothetical protein TERM 13 12736 - 12719 - R 83 -6.3 -5.15381 | gap 1, opp_overlap 12719, overlap 12721 AAGAGAGTGAAAAAA CAGCGCTA TTA TAGCGC-G AATTCGTATCTACGT TERM 14 12735 - 12721 - R 89 -10 -4.19215 | opp_overlap 12719, overlap 12719 GAGAGTGAAAAAACA GCGCTA TTA TAGCGC GAATTCGTATCTACG MADE_00013 13517 - 12816 - | methyltransferase-related protein TERM 15 13518 - 13497 - G 86 -5.1 -5.61881 | opp_overlap 13497, overlap 13499 GCTGAAAAAGAAAAA GGTGATGGC TTTC ACCATCATC TTACATTGATTGAGT MADE_00014 14435 - 13812 - | cytochrome c4 cytochrome C, class I in atlantica MADE_00015 14610 - 15248 + | GTP-binding protein TERM 16 15314 - 15288 - T 100 -10.8 -5.24129 | overlap 15291 CTGTGTTAGAAAAAA GAACGCCTCGCA TAG TGCGAGGCGTAA ACTGAGAGAAAACAC TERM 17 15311 - 15291 - T 100 -16.9 -4.72201 | overlap 15288 TGTTAGAAAAAAGAA CGCCTCGCA TAG TGCGAGGCG TAAACTGAGAGAAAA TERM 18 15472 - 15453 - T 100 -13.6 -5.76633 | TCAGACATAAAAAAA CCCCGACA AAAC TGTCGGGG TTAAAGCAAAGGTTT MADE_00016 18424 - 15632 - | DNA polymerase I TERM 19 15896 - 15910 + g 83 -9.2 -4.36914 | AGGCGCATTGATAGC GGCGCG TTC TGCGCC TTTTCTACGGGCACC TERM 20 16606 - 16617 + g 87 -7.2 -5.14682 | CAGACGTTGATGGCG CGCC TTTA GGCG TTTTCTTTATTATGG TERM 21 18569 - 18581 + H 73 -7.7 -3.92522 | overlap 18561 18558 18575 AGTTTGGCGCACGAC GATCG TGG CGATC TTTGTCAAGTTAAAG MADE_00017 18846 - 19499 + | enhancing lycopene biosynthesis protein 2 TERM 22 19530 - 19555 + F 89 -11.9 -3.48036 | ATTTTTGTTTCGCGA TGTGGGGATAC AAAG GTTTCCCCACA TTCATTATAGTCCTA MADE_00018 19688 - 21139 + | Trk system potassium uptake protein TrkH TERM 23 21174 - 21220 + T 88 -9.1 -4.57353 | gap 1, opp_overlap 21186 AAAATTATCGGTTTA TTAAACTAGAAAGGGCGATA ACTTCAAC TATCGCCCTTTGT-GTTTAA TTTTCTGTGCTCAAA TERM 24 21209 - 21186 - T 89 -9.6 -4.15841 | opp_overlap 21174 TTATTAAACTAGAAA GGGCGATAAC TTCA ACTATCGCCC TTTGTGTTTAATTTT MADE_00019 22664 - 21285 - | Trk system; major constitutive K+ transport system; potassium transport inner membrane protein subunit; six MADE_00020 24049 - 22730 - | 16S rRNA m(5)C 967 methyltransferase TERM 25 24017 - 23995 - G 80 -9.8 -3.91984 | opp_overlap 23995 AGATTTGGTAAATAA CCCACGCGCA ATC TGCACGCAGG TTCTTTTGTTTGGGA MADE_00021 24990 - 24052 - | methionyl-tRNA formyltransferase MADE_00022 25520 - 25011 - | N-terminal methionine peptide deformylase MADE_00023 25707 - 26810 + | Peptidoglycan-binding LysM TERM 26 26818 - 26860 + F 73 -10 -2.882 | gap 1, overlap 26817 AACCTTAACGTTCCG AGTGC-CTCATTGTCGCTT AGTAAG GAGCGGCAATGAGCGCACA ATTTACATCTTTAGA MADE_00024 26850 - 27959 + | DNA protecting protein DprA MADE_00025 27961 - 28437 + | smg protein TERM 27 29046 - 29030 - g 84 -5.1 -5.4251 | TTGATAGATAAAAAA GGGCA AATTCAG TGCCC GCAGCCAACTTGTGG MADE_00026 28532 - 29074 + | putative DNA topoisomerase; C4 zinc finger domain protein MADE_00027 29097 - 29702 + | putative double-stranded RNA-binding protein with unique protein fold, with YrdC/RibB domain MADE_00028 29699 - 30631 + | coproporphyrinogen III oxidase TERM 28 30732 - 30708 - f 79 -5 -5.01546 | gap 1, opp_overlap 30702 30708 30709, overlap 30709 AAAGTCATACAAAAA CGCCGCATGAA GTCA CTC-TGCGGCA TTTCTTGTTGATCTA MADE_00029 30867 - 31541 + | outer membrane protein OmpW TERM 29 31623 - 31652 + TF 100 -11.6 -5.69793 | gap 1 AGTAACAGGGGACTT GCGCGTT-AAAGG TTATT CCTTTCAACGCGC TTTTTTATTTGGTGT MADE_00030 32088 - 31657 - | putative hemoglobin-like oxygen-binding protein TERM 30 31904 - 31888 - Gf 75 -2.9 -5.20783 | ACTTAAATATAAAAA GAACACG TGG CGAATTC TATCAAGCGGTTGAG MADE_00031 32087 - 32926 + | shikimate 5-dehydrogenase TERM 31 32934 - 32914 - TR 70 -9.8 -2.67803 | opp_overlap 32917, overlap 32910 TGTTGAGCAAAGTGA GAAGCGAA ACTAG TTCGCTTC TTCCAAGTATTCATC MADE_00032 33465 - 32923 - | putative carbonic anhydrase/acetyltransferase MADE_00033 33757 - 34653 + | CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase TERM 32 34811 - 34781 - T 75 -9.8 -3.33815 | ACCCTCCTGAAGTAA GTCTCTACTACCTT TAT AGGGCAGTAAAGAC GGGAGTTTAGAAAAA MADE_00034 36961 - 36845 - | hypothetical protein TERM 33 37514 - 37502 - R 85 -9.1 -4.2354 | GAAAGGCGAAAAGAA CCCCT GTG AGGGG AGTGAAATAGAACCT TERM 34 38302 - 38284 - R 74 -8.9 -3.54743 | overlap 38297 CATGAGTAACGATAA TGGGAGT GAAAA ACTCCCA CGCCGGAAGACCAAG TERM 35 40276 - 40261 - R 91 -11.8 -3.99374 | opp_overlap 40261 TCCTATTAAGAAGAA CCCGCC TAAC GGCGGG TTTTTTGCTTTATAT TERM 36 40261 - 40276 + r 100 -11.8 -5.4387 | opp_overlap 40261 TCCTATTAAGAAGAA CCCGCC TAAC GGCGGG TTTTTTGCTTTATAT TERM 37 40511 - 40540 + r 72 -10.1 -2.57132 | opp_overlap 40514 40519, overlap 40519 TGCCAGGTCCCATTA AAAGAAAACCGCC TACC GGCGGTTTTTTTG CTTCTGGAAGAAACA TERM 38 40537 - 40514 - R 89 -9.6 -4.2558 | opp_overlap 40511 40519, overlap 40519 CAGGTCCCATTAAAA GAAAACCGCC TACC GGCGGTTTTT TTGCTTCTGGAAGAA TERM 39 40519 - 40532 + r 100 -9.5 -5.68023 | opp_overlap 40514 40519, overlap 40511 CCCATTAAAAGAAAA CCGCC TACC GGCGG TTTTTTTGCTTCTGG TERM 40 40532 - 40519 - R 93 -9.5 -5.13722 | opp_overlap 40519 40511, overlap 40514 CCCATTAAAAGAAAA CCGCC TACC GGCGG TTTTTTTGCTTCTGG TERM 41 40592 - 40559 - R 90 -8.9 -5.09762 | opp_overlap 40562, overlap 40562 40564 CTGGAAGAAACAAAA TAATAGGGTCAGAGT CAGA ACTCTGCCCCCATTT AGTTAGAAGTGGTAG TERM 42 40589 - 40562 - R 91 -10.6 -4.62561 | opp_overlap 40562, overlap 40559 40564 GAAGAAACAAAATAA TAGGGTCAGAGT CAGA ACTCTGCCCCCA TTTAGTTAGAAGTGG TERM 43 40562 - 40589 + r 77 -8.4 -3.91084 | opp_overlap 40562 40559 40564 GAAGAAACAAAATAA TAGGGTCAGAGT CAGA ACTCTGCCCCCA TTTAGTTAGAAGTGG TERM 44 40587 - 40564 - R 86 -11 -3.87927 | opp_overlap 40562, overlap 40562 40559 AGAAACAAAATAATA GGGTCAGAGT CAGA ACTCTGCCCC CATTTAGTTAGAAGT MADE_00035 41125 - 40595 - | conserved protein of unknown function ; putative secreted protein MADE_00036 42041 - 41262 - | hypothetical protein MADE_00037 42864 - 42073 - | hypothetical protein MADE_00038 45964 - 43004 - | putative DNA polymerase III alpha chain MADE_00039 47576 - 46122 - | Nucleotidyltransferase/DNA polymerase involved in DNA repair MADE_00040 48283 - 47579 - | RecA/RadA recombinase TERM 45 48314 - 48299 - gR 80 -6.2 -4.70515 | opp_overlap 48299 48297 GACACTCAAAATAAA CTGTAT TTTT ATACAG TATTATAGTGCAGCA TERM 46 48353 - 48334 - gR 80 -6.5 -4.74132 | opp_overlap 48334 ATAGTGCAGCAAAAA GCCTTTT CAAGCC AAAAGGC TTTCGCCCCATTGTT MADE_00041 48282 - 48404 + | hypothetical protein MADE_00042 49045 - 48533 - | hypothetical protein TERM 47 48942 - 48964 + g 83 -9.9 -4.10179 | gap 1 TTCGTTTGCTTATTC GAGT-GGCGC AACA GCGCCAACTC TTTCTGTAAGTTCTG MADE_00043 50799 - 49048 - | hypothetical protein MADE_00044 51174 - 50839 - | hypothetical protein TERM 48 51057 - 51035 - G 79 -10.6 -3.49568 | overlap 51033 51036 GGATCGACAACAACA CTCGTGTGGG TAT CCCACACAAA GTCGCCTATCTCGAT TERM 49 51056 - 51036 - G 76 -11.9 -2.69259 | overlap 51035 51033 GATCGACAACAACAC TCGTGTGGG TAT CCCACACAA AGTCGCCTATCTCGA MADE_00045 51363 - 53000 + | probable aminopeptidase TERM 50 53026 - 53043 + F 91 -7.7 -5.21709 | opp_overlap 53026 GGTTAAATTAGGAAA GCAGCAT TTTT GTGCTGC TTTTTTCCTCTCAAG TERM 51 53877 - 53863 - g 78 -6.4 -4.65263 | ATGGCTGAAAAGAAA TTCGCC AAA GGCAAA AAGAGTTATGGAATA MADE_00046 53290 - 54057 + | putative lipopolysaccharide biosynthesis glycosyltransferase TERM 52 54136 - 54121 - T 78 -3.9 -5.29445 | CTGCAACAAGAAAAA GGCAC TTACAT GCGCC TTTCATTTTAGTAGC MADE_00047 54756 - 54169 - | nucleoid occlusion protein MADE_00048 56101 - 54878 - | DNA/pantothenate metabolism flavoprotein TERM 53 56669 - 56685 + G 72 -6.5 -4.3129 | ATTAAGAGACTGCCA GCGGGAA AAA TTCGCGC TTTTAATGCTAGATA MADE_00049 56307 - 56984 + | DNA repair protein RadC MADE_00050 57077 - 57436 + | hypothetycal protein TERM 54 57449 - 57482 + F 83 -9 -4.03413 | opp_overlap 57457, overlap 57457 TAAATTTAAGAGTAT TCGAAAAAGCCGCT TTTATT AGCGGCTTTTTTTA TTTGTATCGCAAAAT TERM 55 57474 - 57457 - f 87 -8.4 -4.63928 | opp_overlap 57457 57449 AGAGTATTCGAAAAA GCCGCT TTTATT AGCGGC TTTTTTTATTTGTAT TERM 56 57457 - 57474 + F 100 -8.4 -6.04953 | opp_overlap 57457, overlap 57449 AGAGTATTCGAAAAA GCCGCT TTTATT AGCGGC TTTTTTTATTTGTAT TERM 57 57492 - 57503 + F 70 -3 -5.1166 | overlap 57483 TTTTTATTTGTATCG CAAA ATAA TTTG TTTTTAGTTTTAGTC MADE_00051 57530 - 58219 + | putative lipoprotein MADE_00052 58219 - 58764 + | hypothetical protein MADE_00053 58788 - 58970 + | WbfC protein Wbf genes involved in EPS (not LPS) TERM 58 59135 - 59106 - g 75 -9.9 -3.64822 | opp_overlap 59134 ACGGTCTTATTCAAA CGCCTACCGCACG TATT CGTGAAGAAGGCG GCATGGCCATTAACT TERM 59 60225 - 60245 + G 70 -2.5 -5.00616 | overlap 60226 TATTGGAAGCGTATG ACCCTGA AAATACG TCAGGGC TTTTTTACAGCGCCG MADE_00054 58967 - 61069 + | Fusion of WbfC- and WbfB-like uncharacterized TERM 60 61104 - 61070 - f 75 -10.1 -3.21099 | opp_overlap 61070 61079, overlap 61079 CCTTTTTACGACTAA CGAAATAAACGCCAC TTCAT GTGGCGTTTTTTTAG TTTTTTCTGGGCACC TERM 61 61070 - 61104 + F 100 -10.1 -5.24129 | opp_overlap 61070 61079, overlap 61079 CCTTTTTACGACTAA CGAAATAAACGCCAC TTCAT GTGGCGTTTTTTTAG TTTTTTCTGGGCACC TERM 62 61095 - 61079 - f 91 -9.4 -4.58308 | opp_overlap 61070 61079, overlap 61070 GACTAACGAAATAAA CGCCAC TTCAT GTGGCG TTTTTTTAGTTTTTT TERM 63 61079 - 61095 + F 100 -9.4 -5.88061 | opp_overlap 61079 61070, overlap 61070 GACTAACGAAATAAA CGCCAC TTCAT GTGGCG TTTTTTTAGTTTTTT TERM 64 61466 - 61480 + G 80 -7.1 -4.57341 | opp_overlap 61466 61465 TCACACGCACGAAAT GCGAC TCGTC GTCGC TTTTTACCAAACCTT MADE_00055 61397 - 61633 + | ribosomal protein L28 MADE_00056 61645 - 61800 + | 50S ribosomal subunit protein L33 TERM 65 61842 - 61827 - f 89 -10.4 -4.25104 | opp_overlap 61827 TTGTCTCCACGAAAA CCCAGC CTTT GCTGGG TTTTTTGCTTTTTGA TERM 66 61827 - 61842 + F 100 -10.4 -5.54079 | opp_overlap 61827 TTGTCTCCACGAAAA CCCAGC CTTT GCTGGG TTTTTTGCTTTTTGA MADE_00057 62066 - 62530 + | hypothetical protein MADE_00058 62531 - 63340 + | formamidopyrimidine-DNA glycosylase TERM 67 63346 - 63370 + T 93 -10.1 -5.10461 | opp_overlap 63351, overlap 63347 CCAACGTTAATACCG ATAAATGCCTG TTA CAGGCATTTAG TTTTTCTTACCTAAC TERM 68 63347 - 63369 + T 95 -13.6 -3.65554 | opp_overlap 63351, overlap 63346 CAACGTTAATACCGA TAAATGCCTG TTA CAGGCATTTA GTTTTTCTTACCTAA TERM 69 63365 - 63351 - T 86 -10 -3.9777 | opp_overlap 63347 63346 GTTAATACCGATAAA TGCCTG TTA CAGGCA TTTAGTTTTTCTTAC MADE_00059 63855 - 63367 - | phosphopantetheine adenylyltransferase MADE_00060 64605 - 63961 - | 3-deoxy-D-manno-octulosonic-acid kinase TERM 70 64546 - 64536 - G 72 -5.4 -4.41494 | CATGCTCAATGAAAA TGGT TGT ACCA CGTCCTTTCGCTTGA TERM 71 64663 - 64649 - H 81 -5.6 -5.07652 | opp_overlap 64650, overlap 64650 TCGTCGAAAATAAAA TGGTGC CCA GCACCT ATGTCTCGTCGTATT TERM 72 64662 - 64650 - H 76 -9.1 -3.63868 | opp_overlap 64650, overlap 64649 CGTCGAAAATAAAAT GGTGC CCA GCACC TATGTCTCGTCGTAT MADE_00061 64664 - 64780 + | hypothetical protein MADE_00062 64780 - 65784 + | putative ADP-heptose:LPS heptosyltransferase MADE_00063 65874 - 66347 + | hypothetical protein MADE_00064 66344 - 67519 + | hypothetical protein TERM 73 68148 - 68135 - g 73 -2.3 -5.10933 | GCAGGGAAAACAAAA CTTGC TGTA GCTAG CCAAGTATCTGCGGC MADE_00065 67529 - 69973 + | GGDEF/EAL domain protein TERM 74 70668 - 70678 + G 72 -3.2 -5.08824 | CTTCAAAATCATTGC CACT GAC GGTG TTTTTTCAATGGACG MADE_00066 70132 - 71328 + | 2-amino-3-ketobutyrate coenzyme A ligase TERM 75 71386 - 71358 - g 74 -5.4 -4.62471 | overlap 71377 71384 GCGAAGGCGGAAAAA GGCATTTGGC-TGC AAG ACACGCCAAA-GCC GGAAGTCGGGCACAA MADE_00067 71325 - 72350 + | L-threonine 3-dehydrogenase MADE_00068 72350 - 72661 + | glpE protein TERM 76 72720 - 72696 - f 100 -17.3 -3.84389 | opp_overlap 72696 72700, overlap 72700 GACGTAAGAACATAA CAAAGGTGCAC ACG GTGCACCTTTG TTTTATGCTTTGCAG TERM 77 72696 - 72720 + F 100 -17.3 -4.61566 | opp_overlap 72696 72700, overlap 72700 GACGTAAGAACATAA CAAAGGTGCAC ACG GTGCACCTTTG TTTTATGCTTTGCAG TERM 78 72716 - 72700 - f 100 -12.3 -4.51763 | opp_overlap 72700 72696, overlap 72696 TAAGAACATAACAAA GGTGCAC ACG GTGCACC TTTGTTTTATGCTTT TERM 79 72700 - 72716 + F 100 -12.3 -4.84219 | opp_overlap 72696 72700, overlap 72696 TAAGAACATAACAAA GGTGCAC ACG GTGCACC TTTGTTTTATGCTTT TERM 80 73363 - 73377 + G 74 -8.6 -3.92485 | overlap 73326 AACGGACCCTTGGCA TGAGCA TGT TGCTCA TTGTGTTTATCGTAT MADE_00069 72834 - 73697 + | putative glpG protein TERM 81 73757 - 73791 + T 74 -4.4 -4.86621 | opp_overlap 73763 TTGAACCATTCATAC TAAAAAGCGAGC GCATTACACCG GCTCGCTTTCTA TTTTTACTTACCCGT MADE_00070 74231 - 73818 - | flagellar basal body-associated protein FilL MADE_00071 74380 - 74949 + | hypothetical chorismate pyruvate lyase TERM 82 75652 - 75662 + G 74 -6.8 -4.25074 | opp_overlap 75652 CCTGGCCTTACTATA CAGC CGT GCTG TTTTCCGCTTTGCTA MADE_00072 74946 - 75806 + | 4-hydroxybenzoate octaprenyltransferase MADE_00073 76025 - 76375 + | hypothetical protein MADE_00074 76377 - 76682 + | DNA-binding protein TERM 83 76692 - 76722 + T 75 -5.5 -4.80736 | gap 1 ATGTAACGTTTCTTT TGTTCTGC-GCCTT TGCA AAGGCAGAAGAGCA TTTCTTTATTTCATC TERM 84 76767 - 76753 - T 95 -8.5 -5.46657 | opp_overlap 76753 76752 GATCCCAACAAAAAA GCGCC GTAAA GGCGC ATTGTATTTTTGAAA TERM 85 76783 - 76796 + T 71 -5.3 -4.52703 | opp_overlap 76783 ATTGTATTTTTGAAA GTAGT AAGT ACTAC TTTTCTGCTAGTTTC MADE_00075 77044 - 76793 - | hypothetical protein MADE_00076 77156 - 79171 + | ATP-dependent DNA helicase Rep TERM 86 79229 - 79186 - T 74 -6.3 -4.3453 | gap 2, opp_overlap 79199 79201, overlap 79187 AAGTCTAAATATAAA GCGCTA-CC-GTTAAGAGTAA GCAC TTACTCTTAACTAGCTAGCGA CGTCATATCCAGCAC TERM 87 79228 - 79187 - T 73 -9.8 -3.19634 | gap 2, opp_overlap 79199 79201, overlap 79186 AGTCTAAATATAAAG CGCTA-CC-GTTAAGAGTAA GCAC TTACTCTTAACTAGCTAGCG ACGTCATATCCAGCA MADE_00077 81815 - 79215 - | Intracellular signaling protein (GAF,GGDEF,EAL domains) TERM 88 81119 - 81131 + g 74 -3.4 -5.01535 | CAAAAAGTGCTTGCT GTAG CGACT CTAC TTTTTGTCGTTCTAA TERM 89 81505 - 81538 + g 76 -11.7 -2.5547 | opp_overlap 81481 81504, overlap 81504 CCATCCATTAACGAC TCGGCGGGCAATTGG TGAA CCGTTTGCTCGTCGA ATTCATCTACAAAAT MADE_00078 82326 - 81919 - | cytochrome c5 MADE_00079 83693 - 82701 - | Amidophosphoribosyl transferase TERM 90 82943 - 82959 + g 74 -3.6 -4.96848 | GCAATACGTCGTAGG CTGGAG ATAAG CGCCAG TTTTTATCTGAGAAG MADE_00080 84108 - 83884 - | hypothetical protein TERM 91 84137 - 84147 + GH 79 -3.2 -5.27399 | GCTTGCTTTACGAGG TTGC CGA GCAG TTTTTTCGTGTATTC MADE_00081 84100 - 84213 + | hypothetical protein TERM 92 84291 - 84246 - fH 71 -7.3 -3.92625 | gap 2, opp_overlap 84247 84247, overlap 84217 84248 GACATGTCAATTAAA TA-GCCATAAATGGCG-TTTA GGGTCT TAAAGCACCATTTATGGCGTA TTAAGAGGAGGTTGT TERM 93 84288 - 84248 - fH 88 -11.5 -3.5486 | gap 1, opp_overlap 84247 84247, overlap 84217 84246 CATGTCAATTAAATA GCCATAAATGGCG-TTTA GGGTCT TAAAGCACCATTTATGGC GTATTAAGAGGAGGT MADE_00082 84477 - 85874 + | Na+/H+ antiporter NhaC TERM 94 85966 - 85931 - T 89 -12 -3.47349 | overlap 85961 CCCTTAAAGGGATAA TTACGACTTTATACCC ACTA GGGGATAAAGCCGCAA AGGCAGTTATGCTTT MADE_00083 86399 - 85980 - | protein of unknown function DUF395, YeeE/YedE MADE_00084 86848 - 86420 - | protein of unknown function DUF395, YeeE/YedE MADE_00085 87390 - 86938 - | YhdE (NsrR) TERM 95 86967 - 86985 + g 76 -8.9 -3.76289 | opp_overlap 86958 86961, overlap 86959 TAAAATCGATGGCAA GGTGCAT CGCTA ATGCACC TTCTCTGTCTTTTAC TERM 96 87719 - 87736 + G 80 -6.3 -4.88918 | opp_overlap 87713 TCAAAGAAGGTCTAG TAGACGT TAAA GCGTCTA TTTTATTTGCCGTGC TERM 97 87969 - 87952 - g 95 -7.7 -5.28176 | opp_overlap 87951 GTCATTGAGAAAAAA CAACCCA ACAT TGGGCTG ATAGTTATTGAAGGC TERM 98 88092 - 88080 - g 78 -6.2 -4.72986 | opp_overlap 88078 88080 CATGCCCATGAAAAA CGCG GTGGG CGCG TCTTTATTCATTATC MADE_00086 87520 - 88320 + | hypothetical protein MADE_00087 88331 - 89185 + | metallo-beta-lactamase family protein TERM 99 89577 - 89566 - g 71 -3.6 -4.82901 | GGTCTTTCACAAAAA GCCG GCTA CGAC CTAAGCGGGGTAGTG TERM 100 89624 - 89607 - g 74 -3.3 -5.03314 | gap 1, overlap 89608 89609 GCGACGCCTAAAAAA CGGCGGCG AAA CGCC-CAG TGATCATGCCGATCA TERM 101 89873 - 89860 - g 70 -5.2 -4.51196 | opp_overlap 89860 GTTAAATGGATAAAA GCCG GCGTAG CGGC CTTTGCGCCAAAAGA TERM 102 90076 - 90066 - g 82 -5.4 -5.2189 | GGAATTAGTAAAAAA CCTT AAA AAGG GAAAGGCCGTATTTA MADE_00088 89197 - 90870 + | uncharacterized NAD(FAD)-dependent dehydrogenase TERM 103 90894 - 90920 + F 100 -5.9 -5.79595 | opp_overlap 90894, overlap 90906 TAAATTCGACAGGAA GCTTTAGCC CGTTAGAAA GGCTAGAGC TTTTTTATTTTAGAA TERM 104 91202 - 91222 + F 89 -6.8 -5.22039 | overlap 91203 TGGTCGAAACTACCT GGCCACCT CTTAA AGGTGGCG TTTTTTCAATTTCAC TERM 105 91203 - 91221 + F 80 -10.3 -3.72139 | overlap 91202 GGTCGAAACTACCTG GCCACCT CTTAA AGGTGGC GTTTTTTCAATTTCA MADE_00089 91240 - 91503 + | putative outer membrane receptor protein MADE_00090 91567 - 92046 + | predicted membrane protein MADE_00091 92123 - 92608 + | hypothetical protein MADE_00092 94369 - 92705 - | cysteine transport (export) protein TERM 106 93535 - 93511 - G 80 -5.7 -5.0065 | overlap 93513 CACCGACAAACAAAA GTGCCAACA TGATAGC TGTTGGCCC CTCAATAATGTGGTG MADE_00093 96068 - 94377 - | MdlB protein TERM 107 95561 - 95549 - G 70 -4.8 -4.45399 | overlap 95558 ATACTAAGAGCAAAA TGGC GCAAA GCCA ATTCAAATAGGCAAC TERM 108 96051 - 96015 - G 74 -5.8 -4.56597 | gap 1, overlap 96016 96017 TTGCTCTTTTAAAAA CTGCGCGCCTGA-TACA GCTT TGTTGTCAGGCGCGCTT CGGGTACTACTAGTC TERM 109 96050 - 96016 - G 70 -9.3 -3.33744 | gap 1, overlap 96015 96017 TGCTCTTTTAAAAAC TGCGCGCCTGA-TACA GCTT TGTTGTCAGGCGCGCT TCGGGTACTACTAGT TERM 110 96049 - 96017 - G 78 -12.8 -2.60032 | gap 1, overlap 96016 96015 GCTCTTTTAAAAACT GCGCGCCTGA-TACA GCTT TGTTGTCAGGCGCGC TTCGGGTACTACTAG MADE_00094 97072 - 96071 - | ubiquinol oxidase subunit II, cyanide insensitive MADE_00095 98400 - 97075 - | putative transmembrane cytochrome bd-ii oxidase (subunit i) oxidoreductase protein TERM 111 98094 - 98109 + g 76 -4.7 -4.82901 | TAGCGGCAAAAAGGT GTACC CCTTGC GGTAC TTTTTCTCGACCAAA TERM 112 98251 - 98221 - G 73 -9.8 -3.46602 | overlap 98225 CGTGGCATACGAGAA GTTACTCCAGTTTG TGC CAAACTGGAACGAC ATAACAATACCGGAA TERM 113 98247 - 98225 - G 73 -11.4 -2.6252 | overlap 98221 GCATACGAGAAGTTA CTCCAGTTTG TGC CAAACTGGAA CGACATAACAATACC MADE_00096 99112 - 98714 - | Rhodanese-related sulfurtransferase MADE_00097 99981 - 99118 - | Zn-dependent hydrolase, glyoxylase family protein TERM 114 99773 - 99789 + g 73 -9.5 -3.40403 | TGATCAGCATGGGCA TGGGTTT CCA AAACCCA TTCTACTAACAAGCC MADE_00098 100694 - 100044 - | alkyl hydroperoxide reductase MADE_00099 100829 - 101275 + | hypothetical protein TERM 115 101329 - 101340 + T 76 -2.2 -5.52384 | TTCCGCTTAATCACT GCTG TTGA TAGC TTTTTTTCGTAAGGG MADE_00100 102153 - 101320 - | putative thiol:disulfide interchange protein MADE_00101 102849 - 102340 - | transcriptional regulator, LuxR family protein TERM 116 102603 - 102661 + g 80 -6.1 -4.87389 | gap 1, opp_overlap 102619, overlap 102605 102606 CTTTCACATTTCGCA GCTTGTTATTCATAGAGCTCAATCGTGC AGTG GCGGTATTGAGCTCGGCGAGTAACA-GC TTTGTTTTTCGGGTG MADE_00102 103020 - 104144 + | Outer membrane protein TERM 117 104644 - 104662 + G 95 -2.3 -6.02914 | overlap 104646 104651 CGATATCGGATATTT GGTTGCC CCAGA GGCAGGC TTTTTTTTATATGCA MADE_00103 104141 - 105160 + | hypothetical protein TERM 118 105509 - 105488 - g 73 -9.5 -3.40867 | gap 1, opp_overlap 105485 105489, overlap 105503 CCAGGCAGCAAGTAA GCGCACGCTT AGC AAGCGTG-GC CGATTTGCTGCCAGC MADE_00104 105196 - 108225 + | cation efflux system protein CzcA MADE_00105 108218 - 108535 + | hypothetical protein TERM 119 108575 - 108562 - f 71 -9.5 -2.80583 | opp_overlap 108562, overlap 108561 108559 TACTAAAAAAGATAC GCCGC TAAT GCGGC TTGCGTATAACATTG TERM 120 108562 - 108575 + F 73 -9.5 -3.13475 | opp_overlap 108562 108561 108559 TACTAAAAAAGATAC GCCGC TAAT GCGGC TTGCGTATAACATTG TERM 121 109661 - 109639 - g 78 -12 -3.04461 | TATTTATGGCCAATA CCGGCCTAGA CGC CCTAGGCCGA GTAATGAGTAACATC TERM 122 109697 - 109684 - g 70 -2.3 -4.98436 | GTAACATCATAAAAA TGGCC ACAT GGCTA GAACCCTTCGCCGAA MADE_00106 108738 - 110498 + | putative choline-glycine betaine transporter MADE_00107 110613 - 110488 - | hypothetical protein TERM 123 110544 - 110527 - G 81 -8.3 -4.41047 | opp_overlap 110527 ATGTGTTAAGCAAAA CGCTGCC AACT GGCGGCG TTTTTGTTTCATGAA TERM 124 110527 - 110544 + g 100 -10.5 -5.33405 | opp_overlap 110527 ATGTGTTAAGCAAAA CGCTGCC AACT GGCGGCG TTTTTGTTTCATGAA TERM 125 111163 - 111144 - g 82 -11.4 -3.49653 | AGCAGCTTTAGAGAA GCGCTAGC CTTT GCCAGCGC CACCTACAAAATAAA TERM 126 111184 - 111198 + G 77 -7 -4.42062 | opp_overlap 111184 ACAAAATAAAGAAAA GCCGGC TAA GCCAGC TTTATTTCGACAATG TERM 127 111198 - 111184 - g 100 -9.2 -5.28281 | opp_overlap 111184 ACAAAATAAAGAAAA GCCGGC TAA GCCAGC TTTATTTCGACAATG MADE_00108 110643 - 111272 + | putative orphan protein MADE_00109 111657 - 111409 - | hypothetical protein TERM 128 111701 - 111691 - H 81 -6.8 -4.75174 | opp_overlap 111690 111691 GATGTAATTCAAAAA CGGT TTA ACCG CTATTATAAACTCAA TERM 129 111866 - 111852 - g 78 -5.6 -4.90918 | ACAAAATCAAGAAAA GCCGAC TAA GCCAGC TTTATTTCGACAACG MADE_00110 111749 - 111913 + | hypothetical protein MADE_00111 113124 - 112096 - | RelA/SpoT MADE_00112 114167 - 113079 - | hypothetical protein MADE_00113 114629 - 114177 - | hypothetical protein TERM 130 114233 - 114244 + g 83 -4.4 -5.38348 | GCCAATCTGAGCTAT CTTG CTCC CAAG TTTTTTGATATTTTT MADE_00114 115117 - 114920 - | hypothetical protein TERM 131 115515 - 115505 - g 89 -4.6 -5.65496 | TAGTAAAAAGAAAAA GCCA GAA CGGC TATCGATATAGGCTT MADE_00115 115288 - 116145 + | putative orphan protein MADE_00116 116741 - 116259 - | hypothetical protein MADE_00117 118852 - 116738 - | ATPase involved in DNA repair TERM 132 117881 - 117892 + g 72 -3 -4.93296 | AAAATATTCTTTATA TTTG CGAC CAAA TTTTTCTAGTGATGG MADE_00118 119092 - 118859 - | hypothetical protein MADE_00119 121323 - 119089 - | Type III restriction enzyme, res subunit TERM 133 120008 - 120024 + g 78 -5.8 -4.86001 | GCTGAAAGTGCAATT CTCCGC TCGAT GTGGAG TTTTTCTAGAATCGT TERM 134 121850 - 121873 + G 73 -4.6 -4.87626 | opp_overlap 121841, overlap 121853 ATATGACTGCTATGC AGAGCTTTGA AAAA TCAAAGCTTA TTTTTGATATTGAAC TERM 135 121853 - 121870 + G 81 -8.5 -4.53398 | overlap 121850 TGACTGCTATGCAGA GCTTTGA AAAA TCAAAGC TTATTTTTGATATTG MADE_00120 121837 - 122397 + | hypothetical protein TERM 136 122662 - 122651 - g 78 -5.8 -4.7497 | opp_overlap 122652 122655, overlap 122653 CCTAGCTAGTAAAAA GCTG CTAG CAGC ACAAGCTGATAGTAC TERM 137 125078 - 125066 - g 74 -3.3 -5.05712 | AGAAATAACGAAAAA GGCGT CTG ACCCC AATGCTTACTTATTC TERM 138 125588 - 125575 - g 70 -2.3 -4.95547 | opp_overlap 125575 GTGAGAAGAAGAAAA CGCTA TTAG TTGCG CTTCTCGATGAGTTA MADE_00121 122394 - 125627 + | putative ATP-binding protein TERM 139 126607 - 126595 - g 77 -3.3 -5.10601 | opp_overlap 126595 AGAAAACCATAAAAA GCGTT ACG ACCGC TTTGTTAAAAAGCAG MADE_00122 125690 - 126742 + | putative phage-related protein MADE_00123 127865 - 126744 - | cysteine desulfurase TERM 140 126819 - 126842 + g 100 -10.4 -5.07275 | gap 1 TGTGTTGAAGTCGAA GCTGAGTCGAA TTG TTCG-CTCAGC TTTTTCTCTATCTAA TERM 141 127455 - 127465 + g 73 -4.6 -4.86133 | overlap 127454 127463 GAGTGCGGTGTCATC TCGC AAC GCGG TTTTTACTGTATCTG MADE_00124 129761 - 127893 - | hypothetical protein TERM 142 128487 - 128469 - G 72 -6 -4.3898 | opp_overlap 128469 128468, overlap 128470 ATCACTGCCATAAAA GTTTAGGC ACA GCCTAAAA GCTTTTTTCATGGTG TERM 143 128486 - 128470 - G 71 -9.5 -3.22906 | opp_overlap 128469 128468, overlap 128469 TCACTGCCATAAAAG TTTAGGC ACA GCCTAAA AGCTTTTTTCATGGT MADE_00125 130450 - 129761 - | hypothetical protein MADE_00126 130591 - 131442 + | predicted transcriptional regulator TERM 144 131496 - 131473 - T 82 -11.2 -3.20236 | overlap 131468 CAATTCAATAGTTAA TGGTATTTGT ATAT ACAAATACCA TTAGGGCGGAAAAAC MADE_00127 133721 - 131553 - | hypothetical protein MADE_00128 134836 - 134228 - | Methyltransferase type 11 TERM 145 134709 - 134719 + g 73 -4.6 -4.82678 | GCGCCTACATCTAGT GCGG TGC CTGC TTTTGATTTTTGTAG TERM 146 135421 - 135402 - g 74 -7.2 -4.20106 | gap 1 AAAGCCGAGCTAAAA GCAGC-TGA AGC TCATGCTGC CCGTACTAATGAATT TERM 147 135604 - 135588 - g 70 -9.4 -3.30441 | overlap 135575 TACTACTCGGCACAA GCAGCG GTCAG CGCTGC CAATGCCACTATTGC MADE_00129 135024 - 136076 + | probable membrane fusion protein (HlyD family of secretion proteins) linked to ABC efflux pumps TERM 148 139424 - 139414 - g 70 -2.4 -5.00895 | CTTATTAGAGAAAAA GAGC GTG GCAC TATAGAGCACCTGCT TERM 149 139438 - 139450 + G 72 -9.1 -3.54424 | ACTATAGAGCACCTG CTGGC TAT GCCAG TTTCAGACAGTGAAA MADE_00132 138811 - 139932 + | putative ABC transport protein TERM 150 140212 - 140198 - g 76 -8.5 -4.07568 | TGGCGTTCGTCAAAA CCGCG TAAGC CGCGG TGCTACGGGCTTAAC MADE_00133 140061 - 142154 + | FhuE receptor TERM 151 142169 - 142192 + F 95 -13.2 -3.64103 | ATTGACCTCCTTATA CGCTGCGCAA GCCT TTGTGCAGCG TTTACGCTATCCCTC MADE_00134 142572 - 143099 + | hypothetical protein TERM 152 143124 - 143158 + T 80 -10.1 -3.72743 | opp_overlap 143126 143133, overlap 143126 143133 AAATGAAGTAAAACC AACAAAAAATGCGGC ATTAA GCCGCATTTTTCGTA TTAGTTTTACTACTG TERM 153 143156 - 143126 - T 100 -14.9 -3.76321 | opp_overlap 143126 143124 143133, overlap 143133 ATGAAGTAAAACCAA CAAAAAATGCGGC ATTAA GCCGCATTTTTCG TATTAGTTTTACTAC TERM 154 143126 - 143156 + T 87 -12.7 -3.43546 | opp_overlap 143126 143133, overlap 143124 143133 ATGAAGTAAAACCAA CAAAAAATGCGGC ATTAA GCCGCATTTTTCG TATTAGTTTTACTAC TERM 155 143133 - 143149 + T 93 -9.4 -4.90136 | opp_overlap 143133 143126, overlap 143126 143124 AAAACCAACAAAAAA TGCGGC ATTAA GCCGCA TTTTTCGTATTAGTT TERM 156 143149 - 143133 - T 100 -9.4 -5.61689 | opp_overlap 143126 143124 143133, overlap 143126 AAAACCAACAAAAAA TGCGGC ATTAA GCCGCA TTTTTCGTATTAGTT MADE_00135 144388 - 143168 - | Acyl-CoA dehydrogenase TERM 157 143531 - 143554 + g 72 -5.2 -4.58395 | AACCCGTTCGTGACC GCGTTTAAGC GCAA GCTCTAACGC TTTTTCGGCCATGCC MADE_00136 144484 - 145419 + | transcriptional regulator, LysR family protein MADE_00137 145486 - 146268 + | metallo-beta-lactamase family protein TERM 158 147124 - 147134 + G 79 -2.4 -5.46657 | GGCATATCTTTACTT CAGC CGG GCAG TTTTTTGTTGGAATC MADE_00138 146410 - 147849 + | hypothetical protein TERM 159 148973 - 148955 - g 78 -11.7 -3.05384 | opp_overlap 148942 CGCTGGCGCACTTAA CGCCCGT TTAGG ACGGGCG CTGATCAAGCTGCTT MADE_00139 147846 - 148994 + | hypothetical protein MADE_00140 150230 - 149004 - | hypothetical protein TERM 160 150310 - 150284 - R 95 -6.5 -5.57729 | opp_overlap 150305 AAATAAGACAAAAAA GCCAGACGCAT AGGAA AAGAGTCTGGC TAAAATTTGGGCGGA MADE_00141 151957 - 150821 - | thiamine biosynthesis protein ThiH MADE_00142 152724 - 151954 - | thiazole synthase TERM 161 152618 - 152642 + g 74 -7.1 -4.32034 | opp_overlap 152617 152616, overlap 152619 GCCAGGGTCACAATG TTGCTTTGAGC AGC GCTCACAGCAC TTTTCATAGTGGTAG TERM 162 152619 - 152641 + g 74 -10.6 -3.18738 | opp_overlap 152617 152616, overlap 152618 CCAGGGTCACAATGT TGCTTTGAGC AGC GCTCACAGCA CTTTTCATAGTGGTA MADE_00143 152935 - 152726 - | sulfur carrier protein ThiS MADE_00144 153623 - 152922 - | Thiamine biosynthesis protein ThiF MADE_00145 155274 - 153694 - | Thiamine monophosphate synthase MADE_00146 157199 - 155271 - | thiamine biosynthesis protein ThiC TERM 163 155311 - 155321 + g 74 -6.8 -4.21631 | opp_overlap 155310 GCGGTATGATAAAGC TCGG CGC CCGA TTTATTAAATGCGTT TERM 164 155338 - 155354 + g 73 -2.2 -5.19819 | overlap 155340 TTATTAAATGCGTTC GCCATG TCCTT CATGCC TTTTTCCTTTTCTTT TERM 165 155751 - 155735 - G 74 -8.7 -3.88498 | GGGTTACATAGCAAA GCATGGC GCA GCCATAC CAGCCAATCATGGCG TERM 166 156885 - 156864 - G 75 -9.5 -3.53091 | ACGTTCTTTGGCAAA GCTTGATGA AACG CCATCAAGC TCACGGGTATCGCTG TERM 167 157341 - 157327 - R 73 -7.2 -4.09864 | ATTGAGTGGTGAAAA CTTATC GCA GATAAG AAGTAAATGTTTGCG MADE_00147 158866 - 157691 - | uncharacterized enzyme of heme biosynthesis MADE_00148 160035 - 158863 - | putative uroporphyrin-III C-methyltransferase MADE_00149 160767 - 160036 - | uroporphyrinogen-III synthetase TERM 168 160862 - 160815 - R 81 -5.6 -5.02476 | opp_overlap 160826 160860, overlap 160820 160826 ATACTGCTTAAAAAA GGGAAGGTAAACGGGATAAGAA AATA TCCCTATCCCGTTTAGCGTGCA TTTTAGCTATAAAGT TERM 169 160857 - 160820 - R 95 -12.9 -3.52177 | opp_overlap 160826, overlap 160815 160826 GCTTAAAAAAGGGAA GGTAAACGGGATAAGAA AATA TCCCTATCCCGTTTAGC GTGCATTTTAGCTAT TERM 170 160851 - 160826 - R 84 -10.5 -3.80083 | opp_overlap 160826, overlap 160820 160815 AAAAGGGAAGGTAAA CGGGATAAGAA AATA TCCCTATCCCG TTTAGCGTGCATTTT MADE_00150 161803 - 160865 - | porphobilinogen deaminase TERM 171 161856 - 161837 - H 72 -3.6 -5.15682 | gap 1, overlap 161838 161840 AAAAGATAAACAAAA CGACGTATC ACA GA-ACGTCA TACGAGATACGTTGT MADE_00151 161999 - 163060 + | Response regulator containing a CheY-like receiver domain and a GGDEF domain TERM 172 163146 - 163122 - T 83 -5 -5.31059 | gap 1, opp_overlap 163122 ACAGCAAGTAAAAAA CGCTGGTAGTA ATGG TACG-CCAGCG TTTCGAAAAAATTAG MADE_00152 163845 - 163174 - | putative phospholipase/carboxylesterase family protein TERM 173 164498 - 164508 + G 74 -5.4 -4.5774 | AAAGCTTATGCCAGA TACC TGT GGTA TTTTCATTCTTCCTC MADE_00153 164133 - 164774 + | guanylate kinase MADE_00154 164945 - 165217 + | DNA-directed RNA polymerase, omega subunit TERM 174 165246 - 165285 + F 90 -10 -4.43213 | overlap 165251 GGGCTTTTATCAGTT ATTTGGCGCCAGTGCTTT GAAA AAAGCACTGGCGCTTTAG TTTTGGTGTATTGGC TERM 175 165251 - 165280 + F 100 -20.9 -4.25388 | overlap 165246 TTTATCAGTTATTTG GCGCCAGTGCTTT GAAA AAAGCACTGGCGC TTTAGTTTTGGTGTA TERM 176 166122 - 166111 - g 76 -4.4 -5.02421 | AAAATGAAAAACAAA GAAC TGAT GTTC AACGAGGTAATGGAT MADE_00155 165361 - 167472 + | bifunctional (p)ppGpp synthetase II/guanosine-3,5-bis pyrophosphate 3-pyrophosphohydrolase MADE_00156 167497 - 167883 + | Endoribonuclease L-PSP family protein TERM 177 167956 - 167933 - g 91 -8.1 -5.00884 | ATGTGTTGGAAAAAA GGCAAACCG ACCTTA CGGTATGCC TTGAAAATGTGCATA MADE_00157 167887 - 168594 + | putative RNA methylase MADE_00158 168769 - 170841 + | ATP-dependent DNA helicase RecG TERM 178 170915 - 170927 + G 71 -6.9 -4.06419 | opp_overlap 170915, overlap 170916 AGTATTGGGAATAAG TGGGG CTT CCCCG TTGTTTCTCACAGCG MADE_00159 170834 - 171610 + | hypothetical protein MADE_00160 171620 - 172093 + | antioxidant, AhpC/Tsa family protein TERM 179 172147 - 172126 - f 100 -15.9 -4.07687 | opp_overlap 172126 ACGTTTCGTTCAAAA GCCCGCAAC CATT GTTGCGGGC TTTTTTCTTTTAGCT TERM 180 172126 - 172147 + F 100 -15.9 -5.80951 | opp_overlap 172126 ACGTTTCGTTCAAAA GCCCGCAAC CATT GTTGCGGGC TTTTTTCTTTTAGCT MADE_00161 172384 - 173250 + | putative orphan protein MADE_00162 173260 - 174294 + | putative ABC-type transport system, periplasmic component TERM 181 175025 - 175012 - g 79 -9.5 -3.6682 | TTCTATTTATTGAAA GCCGC ATCA GCGGC GCCTCAGAGCGTCCC MADE_00163 174291 - 175814 + | putative ABC-type transport system, permease component TERM 182 176339 - 176352 + G 70 -9.5 -2.94912 | opp_overlap 176339, overlap 176335 GATGCGCTTAAGAAA GCGGG TGTG CCCGC TATCTGGGTTACCCA TERM 183 176352 - 176339 - g 83 -9.5 -4.1552 | opp_overlap 176339 176335 GATGCGCTTAAGAAA GCGGG TGTG CCCGC TATCTGGGTTACCCA MADE_00164 175814 - 176848 + | putative ABC-type transport system, ATPase component TERM 184 176935 - 176900 - T 73 -7.1 -4.07746 | opp_overlap 176908, overlap 176908 GGCTTAAAAACAGAA TA-TAACAAGGGCAGCC GTTT GGCTGCCCTT-TCACTA ACTAAGACATTCTTT TERM 185 176927 - 176908 - T 100 -15 -4.02997 | opp_overlap 176908, overlap 176900 AACAGAATATAACAA GGGCAGCC GTTT GGCTGCCC TTTCACTAACTAAGA TERM 186 176908 - 176927 + T 100 -15 -3.6682 | opp_overlap 176908 176900 AACAGAATATAACAA GGGCAGCC GTTT GGCTGCCC TTTCACTAACTAAGA TERM 187 176959 - 176969 + T 76 -6.8 -4.4078 | opp_overlap 176957 176959 ATTCTTTATAACATA CGCA CTA TGCG TTTTCGTTAACCACA MADE_00165 177793 - 176963 - | mechanosensitive ion channel family protein TERM 188 178103 - 178119 + G 82 -5.7 -5.24129 | overlap 178105 TGTAATAGTGATTGG GGCCGGC GCA GCTGGGC TTTTTTGTGCAGCAC MADE_00166 178074 - 179255 + | predicted flavoprotein MADE_00167 179496 - 179624 + | hypothetical protein TERM 189 179943 - 179916 - f 91 -9.8 -4.4874 | opp_overlap 179916 179933 CCTAAAAAGCGAAAA CCCGAGAGGGAC TGTT GTCTGTCTCGGG TATCTAGATAGATTG TERM 190 179916 - 179943 + F 82 -12 -2.92389 | opp_overlap 179916, overlap 179933 CCTAAAAAGCGAAAA CCCGAGAGGGAC TGTT GTCTGTCTCGGG TATCTAGATAGATTG MADE_00168 180024 - 181058 + | hypothetical protein MADE_00169 181456 - 181106 - | HNH nuclease MADE_00170 181888 - 181736 - | hypothetical protein MADE_00171 182026 - 182145 + | hypothetical protein TERM 191 182701 - 182731 + F 70 -5.7 -4.38171 | gap 1 AACCGGCTTTAAGTT CAGT-ATTCTTATT ACTG AATAAGGATTACTG TTTTGCTCTGGTATA MADE_00172 182935 - 183963 + | Abi-like protein MADE_00173 184556 - 184089 - | hypothetical protein MADE_00174 184896 - 186530 + | Transposase, IS4 family protein TERM 192 187428 - 187414 - g 71 -10 -3.27994 | opp_overlap 187412 187416, overlap 187403 GTAAGGCTATAGCAA TAGCCC AAG GGGCTA AGTTACTCAACCCAT MADE_00175 186771 - 187943 + | hypothetical protein ycgF TERM 193 188003 - 188015 + T 72 -3.3 -5.11613 | AAATTCAGGTGAGTT GTGCC TTG GCCAC TTTTTTAACTGCTGT MADE_00176 188876 - 187992 - | chromosome replication initiation inhibitor protein MADE_00177 189069 - 189671 + | arginine exporter protein MADE_00178 189779 - 190096 + | putative exporter protein (SMR family) TERM 194 190165 - 190138 - g 100 -8.4 -5.43974 | opp_overlap 190138, overlap 190128 AAAAGCAAATAAAAA GCCCGTTCGC TTTTCATT GTGAACGGGC TTTTTTACCTTTCTA TERM 195 190138 - 190165 + G 100 -10.6 -5.24449 | opp_overlap 190128 190138 AAAAGCAAATAAAAA GCCCGTTCGC TTTTCATT GTGAACGGGC TTTTTTACCTTTCTA MADE_00179 190098 - 190214 + | hypothetical protein MADE_00180 190927 - 190211 - | hypothetical protein TERM 196 190905 - 190893 - G 72 -5.5 -4.49311 | ACCACCATGAGAAAA CCAAC TAT GCTGG TTAGGGCAATGAGTG MADE_00181 191092 - 191775 + | DnaJ-related protein MADE_00182 192087 - 193232 + | acriflavine resistance protein a precursor MADE_00183 193254 - 196355 + | acriflavine resistance protein B MADE_00184 196413 - 196910 + | hypothetical protein TERM 197 196980 - 196995 + F 93 -10.4 -4.75372 | opp_overlap 196980 TATGATATTCATAAA GCCCAC TTCG GTGGGC TTTTTGCTACCTGCT TERM 198 196995 - 196980 - f 84 -10.4 -3.95787 | opp_overlap 196980 TATGATATTCATAAA GCCCAC TTCG GTGGGC TTTTTGCTACCTGCT TERM 199 197582 - 197602 + G 77 -11.9 -2.76093 | overlap 197579 197596 CAAATTAACCCGCAA GTGCCTAGA ACA TCTGGGCAC TCCTATATTCACATT TERM 200 198570 - 198558 - g 70 -4.7 -4.53602 | opp_overlap 198558 CCCATACCAAAGAAA CGCTG AGG CTGCG TTATAACTACGACCC MADE_00185 197117 - 198964 + | fused 4-Hydroxybutyrate CoA-transferase/acetyltransferase domain of GNAT MADE_00186 198961 - 199941 + | Histone deacetylase/AcuC/AphA family protein MADE_00187 200727 - 199984 - | glutaredoxin TERM 201 200386 - 200400 + g 71 -7 -4.14739 | opp_overlap 200387, overlap 200387 AAACGGTTCTACATC AGCGGC TAG GCCGCC TTTTAGCATAAGTGC TERM 202 200387 - 200399 + g 73 -10.5 -3.08522 | opp_overlap 200387, overlap 200386 AACGGTTCTACATCA GCGGC TAG GCCGC CTTTTAGCATAAGTG TERM 203 200399 - 200387 - G 71 -10.5 -2.62515 | opp_overlap 200387 200386 AACGGTTCTACATCA GCGGC TAG GCCGC CTTTTAGCATAAGTG MADE_00188 201367 - 200849 - | Secreted protein, containing thioredoxin-like domain TERM 204 201330 - 201307 - G 81 -12.4 -3.22777 | overlap 201305 GGCCATACACTAACA GGGCGGTGAG CAGG CTTACCGCCC ATAATGCTAACAGTG MADE_00189 202881 - 201400 - | putative methyl-accepting chemotaxis protein TERM 205 202505 - 202494 - G 74 -5.8 -4.67038 | overlap 202495 202496 CTTCGAAAATGAAAA GTGG CGCG CCAC CCGCCTGTAAAAAGA MADE_00190 203047 - 203919 + | hypothetical protein TERM 206 203960 - 203933 - T 100 -12.8 -5.16206 | overlap 203927 203925 AAAGGAATACAAAAA GGGCTTGCAAAA CCTT CTCTGCAAGCCC TTAAAAATATCATCG MADE_00191 205383 - 204061 - | hypothetical protein TERM 207 204490 - 204504 + g 80 -7 -4.57569 | overlap 204491 AGACAGATGCTTTGC CCGGGC CAC GCCCGC TTTTTCAAAGCGTGA TERM 208 204491 - 204503 + g 77 -10.5 -3.3422 | overlap 204490 GACAGATGCTTTGCC CGGGC CAC GCCCG CTTTTTCAAAGCGTG TERM 209 205408 - 205421 + r 82 -8.1 -4.57073 | TTACATTGCCATTAG GCGGT TACG ACCGC TTTTTACGCGCAATG TERM 210 205513 - 205493 - R 93 -9.7 -4.6821 | opp_overlap 205493 205492 AACCTGAATAGAAAA CGCCCAC GTAGTTT GTGGGCG CTTTACGAGATTATT TERM 211 205493 - 205513 + r 73 -10.4 -2.75066 | opp_overlap 205493, overlap 205492 AACCTGAATAGAAAA CGCCCACG TAGTT TGTGGGCG CTTTACGAGATTATT MADE_00192 206166 - 205552 - | GTP cyclohydrolase II MADE_00193 209136 - 206299 - | predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain TERM 212 207385 - 207417 + g 74 -8.4 -3.85817 | opp_overlap 207385 GGTGTTCTCAATTAA GCGGGCGATGTCTT TTATC AACACGTCGCCGGC TTTATGGCCGCAGGT TERM 213 209269 - 209240 - R 100 -15.9 -3.78934 | opp_overlap 209238, overlap 209242 TTTTCTTTAGAATAA TACGAGTTTGGCT GAAA AGCCAAACTCGCA ACTCTGTGCAGTATG TERM 214 209267 - 209242 - R 100 -16.3 -3.4811 | opp_overlap 209238, overlap 209240 TTCTTTAGAATAATA CGAGTTTGGCT GAAA AGCCAAACTCG CAACTCTGTGCAGTA MADE_00194 209607 - 209290 - | hypothetical protein MADE_00195 209712 - 210380 + | Glutathione S-transferase-like protein MADE_00196 212236 - 210395 - | ATP-dependent DNA helicase TERM 215 211810 - 211792 - G 71 -3.9 -4.81551 | gap 1 CATCGATAGCAAAAA GCGCAATG TCGG CATTG-GC AAGCGACTGCTGAAA MADE_00197 212583 - 213920 + | putative Magnesium transporter TERM 216 214014 - 214041 + F 83 -10.6 -3.68024 | CCGCTTGCTATACTC CCTTTGCCGCAT AGGA AAGCGGTAAAGG TTGTGTATTGAACAA TERM 217 214174 - 214184 + G 72 -8.2 -3.81557 | overlap 214148 214172 GCATACAGTATGTGG GGCG TTG CGCC TGTTTATTTCAAGCA TERM 218 214527 - 214537 + G 71 -6.8 -4.02997 | TGGGCTTGCTGTTGT TGGC GTT GCCA TTCTTATCTTCTCTT MADE_00198 214090 - 215022 + | Conserved membrane protein RarD MADE_00199 216327 - 215047 - | response regulator/GGDEF domain protein MADE_00200 218541 - 216370 - | DNA helicase II MADE_00201 218970 - 219776 + | serine acetyltransferase TERM 219 219794 - 219822 + T 76 -7.5 -4.26076 | gap 1 CCCCTCTAATATTGG GGGGT-CAGTGT ACTTTA ACGCTGCACCCC TTTTGATGCGGGTAA MADE_00202 220608 - 219868 - | HAD-superfamily hydrolase, subfamily IA, variant MADE_00203 221550 - 220630 - | tyrosine recombinase TERM 220 220955 - 220965 + g 82 -6.8 -4.87665 | opp_overlap 220954 CGCACTTTAAGCCAT GCGT TTA ACGC TTTTTGTGCGTGACG MADE_00204 222251 - 221556 - | uncharacterized conserved protein, YigA-like protein MADE_00205 223057 - 222248 - | diaminopimelate epimerase TERM 221 223054 - 223004 - G 78 -4.8 -4.96848 | opp_overlap 223006 223006, overlap 223006 TTCTTTAGAGAAAAA TACGTTTTGAGTAACGTTATCA ATTACCA TGAAATCGTTACCCAAACCGTG CATTTTGGAAAATTG TERM 222 223052 - 223006 - G 73 -7.4 -4.11141 | opp_overlap 223006 223006, overlap 223004 CTTTAGAGAAAAATA CGTTTTGAGTAACGTTATCA ATTACCA TGAAATCGTTACCCAAACCG TGCATTTTGGAAAAT MADE_00206 224364 - 223114 - | putative diaminopimelate decarboxylase TERM 223 223832 - 223845 + g 70 -9.5 -3.09175 | TCATAAGTCGCCAGT GCGCG CTCG CGCGC TATTCCAAATTTATT MADE_00207 224594 - 224364 - | hypothetical protein MADE_00208 225656 - 224607 - | glycosyl transferase MADE_00209 226194 - 225676 - | phosphoesterase, PA-phosphatase related MADE_00210 226540 - 227025 + | ribonuclease activity regulator protein RraA TERM 224 227105 - 227067 - T 100 -26.4 -4.85782 | opp_overlap 227071 227077, overlap 227071 GCTTTGAAAAACAAA GAAATAGAAACGGAGGCA TCA TGCCTCCGTTTCTATTTC CGCCTACCACTATTT TERM 225 227071 - 227101 + T 100 -21.4 -3.57263 | opp_overlap 227067 227071, overlap 227077 TGAAAAACAAAGAAA TAGAAACGGAGGCA TCA TGCCTCCGTTTCTA TTTCCGCCTACCACT TERM 226 227101 - 227071 - T 100 -21.4 -4.94811 | opp_overlap 227071 227077, overlap 227067 TGAAAAACAAAGAAA TAGAAACGGAGGCA TCA TGCCTCCGTTTCTA TTTCCGCCTACCACT TERM 227 227077 - 227095 + T 100 -14.6 -4.33258 | opp_overlap 227071 227067, overlap 227071 ACAAAGAAATAGAAA CGGAGGCA TCA TGCCTCCG TTTCTATTTCCGCCT MADE_00211 227964 - 227158 - | putative S1/P1 Nuclease MADE_00212 228599 - 227967 - | 3-octaprenyl-4-hydroxybenzoate carboxy-lyase MADE_00213 230031 - 228673 - | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase TERM 228 230243 - 230263 + H 81 -11.2 -2.9732 | opp_overlap 230228 230242 230245, overlap 230241 230245 230247 CGGTTACAATCTAAC CACAGGTG ACTAC CACCTGTG TGCTTTCAGTTAAAA TERM 229 231077 - 231089 + G 80 -5.5 -5.04597 | ATTCACCGCTTGCTA TGTCG TGG CGGCA TTTTTATGTATCCGT MADE_00214 230345 - 231322 + | fructose-1,6-bisphosphatase TERM 230 231327 - 231352 + F 77 -6.1 -4.56597 | opp_overlap 231332, overlap 231332 ACGCGAAGTAATGGA AAAAATGGCCC TGAT GGGCCATTTGG TTTTTAAAAAGCAGC TERM 231 231347 - 231332 - f 100 -10.4 -5.1848 | opp_overlap 231332 231327 AAGTAATGGAAAAAA TGGCCC TGAT GGGCCA TTTGGTTTTTAAAAA TERM 232 231332 - 231347 + F 90 -10.4 -4.32046 | opp_overlap 231332, overlap 231327 AAGTAATGGAAAAAA TGGCCC TGAT GGGCCA TTTGGTTTTTAAAAA MADE_00215 231487 - 232017 + | inorganic pyrophosphatase TERM 233 232047 - 232067 + TF 100 -13.3 -5.04597 | opp_overlap 232047 AATTGATGATACAAA GGGCTGGTG TAA TACCAGCCC TTTTTGTATGTGGCT TERM 234 232067 - 232047 - Tf 93 -12.6 -4.09822 | opp_overlap 232047 AATTGATGATACAAA GGGCTGGT GTAAT ACCAGCCC TTTTTGTATGTGGCT MADE_00216 232181 - 232029 - | hypothetical protein MADE_00217 232180 - 232656 + | lipoprotein, putative TERM 235 232681 - 232662 - TR 95 -12.2 -4.63486 | AGGGTTCTAACAAAA GCTAGCCT TAGT AGGCTAGC TCTGCGTATAAATCT MADE_00218 233375 - 232677 - | 2OG-Fe(II) oxygenase TERM 236 232786 - 232811 + g 72 -8.3 -3.66178 | opp_overlap 232785 232786 GTGTGAGTAAAATAG GCAGGCGCAAT CACC ATTCTGCCTGC TTTAGGCTTAACCGC MADE_00219 233817 - 233398 - | thioesterase family protein MADE_00220 234003 - 235505 + | putative heat shock protein 70 family protein TERM 237 235568 - 235524 - Tf 93 -11.6 -4.59342 | opp_overlap 235530, overlap 235526 235530 CTTATTATAAATAAA CACTAAGCCTTAGCGTAGTA GCCTT TACTACGCTAAGGCTTTTTT GATCAGTGCTTAAGG TERM 238 235566 - 235526 - Tf 100 -14.2 -3.90309 | opp_overlap 235530, overlap 235524 235530 TATTATAAATAAACA CTAAGCCTTAGCGTAGTA GCCTT TACTACGCTAAGGCTTTT TTGATCAGTGCTTAA TERM 239 235562 - 235530 - Tf 100 -19.4 -3.58566 | opp_overlap 235530, overlap 235526 235524 ATAAATAAACACTAA GCCTTAGCGTAGTA GCCTT TACTACGCTAAGGC TTTTTTGATCAGTGC TERM 240 235530 - 235562 + TF 100 -20.1 -5.1675 | opp_overlap 235530 235526 235524 ATAAATAAACACTAA GCCTTAGCGTAGTAG CCT TTACTACGCTAAGGC TTTTTTGATCAGTGC MADE_00221 235711 - 235571 - | excinuclease ABC subunit A MADE_00222 235681 - 235797 + | hypothetical protein TERM 241 235797 - 235782 - TR 75 -2.6 -5.20633 | gap 1, opp_overlap 235785 AAAAATACACAAAAA TCAT-CG TAA CGTATGA TTTGCCAAAACAAGC TERM 242 235890 - 235866 - TR 100 -14.4 -3.30124 | GCGCACTTCTTACAA GCTGCTGTGT TAATT ACACAGCAGC AAAATAGAAAACGAG MADE_00223 238773 - 235942 - | excinuclease ABC subunit A MADE_00224 239224 - 239355 + | hypothetical protein TERM 243 240666 - 240641 - g 83 -8.9 -4.2651 | opp_overlap 240640 240657 240659 240661 240662 AAACAGTCAAAATAA CGCGGTATACC TTAA GGTTGACCGCG ACTTTGACGCGGTCA MADE_00225 239379 - 240707 + | transporter, putative MADE_00226 240776 - 241360 + | hypothetical phosphatase/phosphohexomutase MADE_00227 242028 - 241435 - | hypothetical protein TERM 244 241534 - 241554 + g 80 -6.9 -4.66163 | GGTTTTCATGGCATC GATAGCAAT CTG ATTGCTCTC TTTTTCACTGACACT MADE_00228 242261 - 243124 + | hypothetical protein TERM 245 243476 - 243494 + T 70 -8.8 -3.2981 | opp_overlap 243476 AATTAGCTAAAAAAA TACCCGCC GTC GGCAGGTA TTAATAATTGCTATA TERM 246 243494 - 243476 - T 100 -11 -5.49729 | opp_overlap 243476 AATTAGCTAAAAAAA TACCCGCC GTC GGCAGGTA TTAATAATTGCTATA MADE_00229 244611 - 243556 - | putative GalR repressor of contiguous operon, likely to bind a galactoside TERM 247 245537 - 245549 + G 70 -9.1 -3.39948 | TAAATTAGTGGACAT TGGCG GTA CGCCA TTCGATTTCTTATCA MADE_00230 244884 - 245906 + | aldose 1-epimerase TERM 248 245961 - 245926 - f 80 -7.9 -4.33274 | opp_overlap 245926 245932, overlap 245931 GCTACACTAGTAAAA GAAAATTAATTGTTA TTAATT TAACAATTATTTTTC TTTGTTACTTAATTG TERM 249 245926 - 245961 + F 80 -7.9 -4.36343 | opp_overlap 245926 245931, overlap 245932 GCTACACTAGTAAAA GAAAATTAATTGTTA TTAATT TAACAATTATTTTTC TTTGTTACTTAATTG TERM 250 245944 - 245931 - f 70 -2.5 -5.14626 | opp_overlap 245926 245932, overlap 245926 ACTAGTAAAAGAAAA TTAAT TGTT ATTAA TTTAACAATTATTTT TERM 251 245932 - 245955 + F 89 -5.5 -5.48514 | opp_overlap 245931 245926, overlap 245926 CTAGTAAAAGAAAAT TAATTGTTA TTAATT TAACAATTA TTTTTCTTTGTTACT TERM 252 246006 - 246026 + F 73 -6.9 -4.27316 | ATGCTATATTATTGT TAGGGTAAA CGT TTAACCCTA TTTTAAGTTGCGCAC TERM 253 247099 - 247084 - g 86 -9 -4.41353 | GCAGACAGATTAAAA GCACTG CCTA CAGTGC ACTATAAAAAACGTG MADE_00231 246142 - 247131 + | galactose-1-phosphate uridylyltransferase MADE_00232 247124 - 248263 + | galactokinase TERM 254 248355 - 248375 + T 100 -7.6 -5.82316 | gap 1 GTTTGTGTCCCTTAA GCCGC-ATC TTTG GATTGCGGC TTTTTTTTACATAAT MADE_00233 248608 - 248405 - | hypothetical protein MADE_00234 248631 - 250193 + | putative sodium/hexose cotransport protein TERM 255 250202 - 250224 + F 74 -9.2 -3.50995 | opp_overlap 250197 250196 GTGGTAAAATTGATA GGGCGTAT TTACTTC ATACGCCC TTATCATACTTTATG MADE_00235 250458 - 251048 + | single-strand binding protein TERM 256 251109 - 251090 - f 70 -7.8 -3.64164 | opp_overlap 251092, overlap 251092 TTAAAAATATTATAA GAGCCGCT TTAT AGCGGCTT TTTGTTTTGAGCTAA TERM 257 251107 - 251092 - f 77 -10.4 -3.38046 | opp_overlap 251092, overlap 251090 AAAAATATTATAAGA GCCGCT TTAT AGCGGC TTTTTGTTTTGAGCT TERM 258 251092 - 251107 + F 100 -10.4 -5.46706 | opp_overlap 251092 251090 AAAAATATTATAAGA GCCGCT TTAT AGCGGC TTTTTGTTTTGAGCT TERM 259 251717 - 251734 + G 79 -8.5 -4.22346 | overlap 251716 AGTCGCCGGGCATGC TAACCCA ATGT TGGGTTA TTTTGAGTCCGTTTC MADE_00236 251322 - 252221 + | hypothetical protein MADE_00237 255014 - 252438 - | membrane of secreted protein TERM 260 254214 - 254197 - G 73 -7.7 -4.1822 | overlap 254198 CTGTATTTTAATAAA CCAGTGG GATA CCACTGA TACGCGATACCATCT MADE_00238 256048 - 255032 - | UDP-glucose 4-epimerase MADE_00239 258350 - 256059 - | beta-galactosidase TERM 261 256545 - 256535 - GH 70 -8.2 -3.6502 | opp_overlap 256530, overlap 256536 GATCGTTGAGGTAAA GCGC GAC GCGC TCGGCATTTGAGAAA TERM 262 258506 - 258477 - gR 100 -14.4 -4.81249 | opp_overlap 258476, overlap 258502 GCTTAAACGCAAAAA GGCACTGCCCTT ATTTGA AAGAGCAGTGCC GATACAACACATTTA MADE_00240 258349 - 258549 + | hypothetical protein MADE_00241 261176 - 258519 - | TonB-dependent receptor TERM 263 261509 - 261556 + r 100 -17.5 -3.85698 | gap 1, opp_overlap 261509 261515, overlap 261515 GCGGTATGGGAGGAA GGAAAACGATAATGCCCTAATA ATAAA TATTAGGGT-TTATCGTTTTCC TTTGTGCCAAACAGG TERM 264 261556 - 261509 - R 100 -15.3 -3.16564 | gap 1, opp_overlap 261509 261515, overlap 261515 GCGGTATGGGAGGAA GGAAAACGATAATGCCCTAATA ATAAA TATTAGGGT-TTATCGTTTTCC TTTGTGCCAAACAGG TERM 265 261515 - 261550 + r 88 -9.3 -4.61873 | gap 1, opp_overlap 261515 261509, overlap 261509 TGGGAGGAAGGAAAA CGATAATGCCCTAATA ATAAA TATTAGGGT-TTATCG TTTTCCTTTGTGCCA TERM 266 261550 - 261515 - R 78 -7.1 -4.45544 | gap 1, opp_overlap 261509 261515, overlap 261509 TGGGAGGAAGGAAAA CGATAATGCCCTAATA ATAAA TATTAGGGT-TTATCG TTTTCCTTTGTGCCA TERM 267 261563 - 261585 + r 83 -9.2 -4.07885 | opp_overlap 261568 TCGTTTTCCTTTGTG CCAAACAGGA GAG TCCTATTTGG TTTTCAGGGACGCTC MADE_00242 263106 - 261622 - | probable carbohydrate kinase TERM 268 263182 - 263198 + H 79 -9.5 -3.78775 | opp_overlap 263182 CTATATTTTCGAAAA CGAACAT TTC ATGTTCG TTTAATCGTGGGAAC TERM 269 263198 - 263182 - H 86 -9.5 -4.10657 | opp_overlap 263182 CTATATTTTCGAAAA CGAACAT TTC ATGTTCG TTTAATCGTGGGAAC MADE_00243 263268 - 264026 + | Glycerol-3-phosphate regulon repressor TERM 270 264924 - 264938 + G 74 -5.6 -4.58308 | CGATTGTGAATGCGG CAGGCC CTT GGGCTG TTTCTTTCCTTGATC TERM 271 265083 - 265098 + G 72 -5.4 -4.40184 | overlap 265083 265084 GAATAGTGTTTGTGA TCCCTT ATGA AGGGGA TTTCTCTTTGGTTGG TERM 272 265290 - 265279 - g 88 -5.8 -5.58454 | overlap 265280 TTTAGAGGAAAAAAA TGCG TCTG CGCA AGAGCTCACCCGCGA MADE_00244 264290 - 265828 + | sn-glycerol-3-phosphate dehydrogenase FAD binding; dioxygen as acceptor TERM 273 265877 - 265847 - f 91 -11.9 -3.93057 | gap 1, opp_overlap 265844 265840, overlap 265839 TTTAAAATCACCAAA GCCGTGAAGCCCAC TTTT GTGG-CTACACGGC CTGATGCTTTTTTAG MADE_00245 265973 - 266557 + | hypothetical protein MADE_00246 266680 - 267183 + | hypothetical protein MADE_00247 267350 - 268264 + | putative Mannose-sensitive agglutinin (MSHA) biogenesis protein MshI (pilus type IV) MADE_00248 268261 - 268887 + | putative Mannose-sensitive agglutinin (MSHA) biogenesis protein MshI (pilus type IV) MADE_00249 268862 - 269509 + | putative Mannose-sensitive agglutinin (MSHA) biogenesis protein MshJ (pilus type IV) MADE_00250 269516 - 269845 + | putative Mannose-sensitive agglutinin (MSHA) biogenesis protein MshK (pilus type IV), lipoprotein TERM 274 271419 - 271405 - g 74 -7.1 -4.36729 | AGCAAGAATCTAAAA CGCCT TTATT AGGCG ACATCCCTTTTATTG MADE_00251 269868 - 271577 + | putative Mannose-sensitive agglutinin (MSHA) biogenesis protein MshL (pilus type IV) MADE_00252 271580 - 272482 + | putative Mannose-sensitive agglutinin (MSHA) biogenesis protein MshM (pilus type IV) TERM 275 272746 - 272732 - g 77 -3.5 -5.10208 | gap 1, overlap 272736 CAACGCTAACAAAAA CCGAGC GTGT GC-CGG GGCTCACCCAAACCG MADE_00253 272479 - 273735 + | putative Mannose-sensitive agglutinin (MSHA) biogenesis protein MshN (pilus type IV) TERM 276 275133 - 275121 - g 85 -6.2 -5.1963 | TGCAAGCAAGAAAAA GCGC CTTCT GCGC AAGAACAAGCCTGGG MADE_00254 273735 - 275447 + | putative Mannose-sensitive agglutinin (MSHA) biogenesis protein MshE (pilus type IV) MADE_00255 275447 - 276682 + | putative Mannose-sensitive agglutinin (MSHA) biogenesis protein MshG (pilus type IV) TERM 277 276723 - 276712 - g 74 -5.8 -4.63932 | TACTGGGGAATAAAA TGGC TGGC GCCA AAACAGGGTTATTGA MADE_00256 276711 - 277205 + | hypothetical protein TERM 278 277207 - 277228 + F 76 -6.7 -4.4715 | gap 1, opp_overlap 277210 AAGTAAACAGGTAAC TAAGCG-TTG GAA CAATCGCTTA TTTTGTAACTTAGGA MADE_002567 277250 - 277837 + | Pilin protein TERM 279 277893 - 277883 - g 80 -6.8 -4.66938 | AGTTTCAACACAAAA GGGT TTT ACCC TAATCGAGTTAATCA TERM 280 278252 - 278276 + G 73 -9.9 -3.39058 | opp_overlap 278239 278256, overlap 278250 TACTGGCGACTATGA TGAAGCGCCAG ATC CAGGCGCTGCA TGTTCTCTCTCGTAT MADE_00258 277860 - 278351 + | MSHA pilin protein MshA TERM 281 278405 - 278436 + GF 90 -10.8 -4.24342 | gap 1, overlap 278406 278409 TAACCATCTTGGTTA TTGGGGTGCTGGCGG TAA CCGCC-GCACCTCGC TTTCTTGGTAACGAC TERM 282 278406 - 278435 + GF 95 -14.3 -3.14284 | gap 1, overlap 278405 278409 AACCATCTTGGTTAT TGGGGTGCTGGCGG TAA CCGCC-GCACCTCG CTTTCTTGGTAACGA TERM 283 278409 - 278432 + GF 95 -14.6 -2.77283 | gap 1, overlap 278406 278405 CATCTTGGTTATTGG GGTGCTGGCGG TAA CCGCC-GCACC TCGCTTTCTTGGTAA MADE_00259 278353 - 278814 + | putative Mannose-sensitive agglutinin (MSHA) biogenesis protein MshC (pilus type IV) MADE_00260 278789 - 279397 + | putative Mannose-sensitive agglutinin (MSHA) biogenesis protein MshD (pilus type IV) MADE_00261 279397 - 280152 + | Tfp pilus assembly protein PilW MADE_00262 280142 - 280603 + | putative Mannose-sensitive agglutinin (MSHA) biogenesis protein MshP (pilus type IV) TERM 284 281601 - 281586 - g 77 -10.4 -3.39784 | opp_overlap 281594 281595, overlap 281584 TCACGCGGAAGAAGA CGCCAG TATT CTGGCG ATGACGTCAGAGTTT TERM 285 281594 - 281613 + G 75 -6.4 -4.37506 | opp_overlap 281586 281584, overlap 281595 AAGAAGACGCCAGTA TTCTGGCG ATGA CGTCAGAG TTTGTATTTAGTGGT TERM 286 282782 - 282770 - g 77 -3.3 -5.26119 | overlap 282772 TTTTGAAAAACAAAA TCGTC GAT GTCGA CCTGAACTATAGCTG TERM 287 283525 - 283538 + G 73 -4.5 -4.7629 | TATTTTGACCAGCCA CTCGC TGAT GTGAG TTTTTCGCTTACTGC TERM 288 284089 - 284067 - g 72 -5.4 -4.38712 | overlap 284068 GGTATCGTCAGAAAA CGGCAACCTC AGC GAGGGCGCCT ATGAGGTGGGTACGG MADE_00263 280783 - 284289 + | putative Mannose-sensitive agglutinin (MSHA) biogenesis protein MshQ (pilus type IV) MADE_00264 284644 - 285687 + | rod shape-determining protein MreB TERM 289 285713 - 285696 - f 90 -11.3 -4.07859 | opp_overlap 285696, overlap 285689 CGAATAAACAGGAAA GGCAACC GTAA GGTTGCC TTATTTGTATCATGG TERM 290 285696 - 285713 + F 93 -11.3 -4.16814 | opp_overlap 285696 285689 CGAATAAACAGGAAA GGCAACC GTAA GGTTGCC TTATTTGTATCATGG MADE_00265 285782 - 286615 + | Rod shape-determining protein MADE_00266 286626 - 287084 + | rod shape-determining protein MreD MADE_00267 287121 - 287711 + | septum formation protein Maf MADE_00268 287708 - 289174 + | cytoplasmic axial filament protein TERM 291 292920 - 292932 + G 82 -5.5 -5.13137 | TGCGCCAAACGTGAC GGGTA ATC TGCCC TTTTTAGTTTATTTC MADE_00269 289201 - 293196 + | putative protease MADE_00270 293189 - 294007 + | predicted amidohydrolase, nitrilase family protein TERM 292 294393 - 294368 - gT 74 -6.9 -4.23999 | gap 1 TTACAGCGAAAATAA CCCCATTCTTGC TAT GCAAGA-TGCGG AAAAGATTGGCTTAC TERM 293 295035 - 295021 - gT 79 -10 -3.5489 | overlap 295017 ACAATGCGAAACTAA TGGGTG TTG CACCCA CCGGTAACGGTCGTC TERM 294 295254 - 295241 - gT 73 -6.7 -4.1899 | TTACCTTATTGAAAA CGGTA AAAT TACCG CGCCAGTGAAAGGGG MADE_00271 293970 - 295442 + | putative suppressor of CsrA inhibitory activity; putative peptidase; involved in the control of DNA gyrase TERM 295 295513 - 295493 - T 100 -7.6 -5.63236 | gap 1, opp_overlap 295493 ATTCAAAAATAAAAA GGTTGG-GC AATT GCACCAACC TTTTTTGTATCTGGG TERM 296 295493 - 295513 + T 93 -7.6 -5.4251 | gap 1, opp_overlap 295493 ATTCAAAAATAAAAA GGTTGG-GC AATT GCACCAACC TTTTTTGTATCTGGG MADE_00272 296099 - 295542 - | hypothetical protein TERM 297 295853 - 295865 + g 80 -6.9 -4.62803 | TAAACTGAAGCTGGC GGCGG TAA CCGTC TTTCTTCTTATTTAC TERM 298 297457 - 297440 - g 70 -9.9 -3.08032 | overlap 297437 TGGTGCTGAAAAGGA TGTACGC GGCA GCGTACA GACGGGCTCAGTGCT MADE_00273 296172 - 297503 + | pmbA protein MADE_00274 298437 - 297583 - | transcriptional regulator, AraC family protein TERM 299 297611 - 297628 + g 74 -5.5 -4.61527 | opp_overlap 297611, overlap 297613 CAACGAAACGCAGAA GGCGACA GCCC TGTCGAC TTTTTAAAGCGTTTT TERM 300 297803 - 297820 + g 72 -6.2 -4.28432 | AGTCTGTGAAGGTGG GGCGCG GAATAG TGCGCC TTTTCGCTTAAGCTT TERM 301 299698 - 299710 + G 70 -9.1 -3.44051 | ACAACTTCAATGCGG TGCGC ACT GCGCA TTATCCTAATCACCC MADE_00275 298542 - 301667 + | beta-D-galactosidase TERM 302 301791 - 301770 - T 100 -14.5 -5.29782 | opp_overlap 301770 CATACCCACAAAAAA GCCGCTACA TTGT TGTAGCGGC TTTTTTAATTCTTGA TERM 303 301770 - 301791 + T 100 -14.5 -5.37865 | opp_overlap 301770 CATACCCACAAAAAA GCCGCTACA TTGT TGTAGCGGC TTTTTTAATTCTTGA MADE_00276 302556 - 301849 - | aerobic respiration control protein ArcA MADE_00277 304393 - 302711 - | Signal transduction histidine kinase (contains HAMP domain) TERM 304 303314 - 303324 + g 85 -6.8 -5.08255 | ACGCTTCATTGCGCT CGCT TTT AGCG TTTTATTTTCAAAAT TERM 305 304309 - 304290 - G 77 -9.4 -3.97636 | ACCGCAAGGGAGAAA GTGGTAAT TGAC ATTACCAC CCAAAGAAAAAGGCT MADE_00278 305890 - 304466 - | glycogen synthase TERM 306 305014 - 305026 + g 71 -6.9 -4.11216 | opp_overlap 305014 305012 AAACCATACCTAATA GCGGT ACT GCCGC TTTTGGCGGTAAACC TERM 307 305656 - 305644 - G 71 -3.3 -4.77775 | AGTCGATAAAATAAA CAGGG ATG CCGTG CCATAGCATATGGCG MADE_00279 307143 - 306061 - | ribosomal RNA small subunit methyltransferase C TERM 308 306721 - 306741 + g 89 -8.9 -4.64861 | TTGCTGCATTAATTT GGCGGCGCT TTT AATGCCGCC TTTGTTTTCACCAAC MADE_00280 307907 - 307143 - | tRNA (guanine-N(7)-)-methyltransferase TERM 309 307401 - 307416 + g 71 -3.9 -4.85599 | overlap 307387 307387 AGGCTGTACAATACG GCGCT TATGAT GGCGC TTTTTGTGCCATGGA MADE_00281 308652 - 307954 - | putative hydrolase TERM 310 308347 - 308357 + g 71 -6.8 -4.07678 | GGAAGTAAGCTGTTT TCGC TTG GCGA TTTCCTCTTTTGACA MADE_00282 308793 - 309860 + | A/G-specific adenine glycosylase MADE_00283 309914 - 310186 + | Fe(II) trafficking protein YggX MADE_00284 310215 - 310328 + | hypothetical protein TERM 311 310454 - 310472 + F 75 -2.5 -5.25803 | gap 1, opp_overlap 310454, overlap 310454 310455 AGCACTTCGATAAAG C-TTGCAA AGTT TTGCAAAG TTTTTTATAAAGCTT TERM 312 310622 - 310640 + F 75 -2.5 -5.25803 | gap 1, opp_overlap 310622, overlap 310622 310623 AGCACTTCGATAAAG C-TTGCAA AGTT TTGCAAAG TTTTTTATAAAGCTT TERM 313 310716 - 310700 - f 76 -10.9 -2.62616 | opp_overlap 310695 TCAGTTGGTAGAGCA GCGGATT GAA AATCCGC GTGTCCCTGGTTCGA TERM 314 310761 - 310784 + F 100 -13.2 -5.80951 | opp_overlap 310761 ACCACTTATAATGAA GCCCTGATCA TAAA TGATCGGGGC TTTTTTATTTTCAGT TERM 315 310784 - 310761 - f 82 -11 -3.46212 | opp_overlap 310761 ACCACTTATAATGAA GCCCTGATCA TAAA TGATCGGGGC TTTTTTATTTTCAGT TERM 316 311970 - 311981 + G 73 -4.4 -4.7923 | ACAAAGAGTGATAGG GACA AACT TGTC TTTATTTCTTTGGAT MADE_00285 311058 - 312155 + | hypothetical protein TERM 317 312784 - 312839 + G 71 -10.3 -2.75562 | gap 1, opp_overlap 312789 312790 312798 312801, overlap 312790 312790 312791 TTTTTAGAGTTTGGA GAAGAGCTTTT-AAATAAGTTTCACA TCAAT TATGAAACTTATTTAAAAAGTTTTTC GTTTGAAGACTTTGT TERM 318 312832 - 312790 - g 78 -12.5 -2.5294 | opp_overlap 312790 312790 312784 312791, overlap 312789 312798 312801 GAGTTTGGAGAAGAG CTTTTAAATAAGTTTCACA TCAAT TATGAAACTTATTTAAAAA GTTTTTCGTTTGAAG TERM 319 312790 - 312833 + G 88 -7.9 -4.98531 | gap 1, opp_overlap 312789 312790 312798 312801, overlap 312790 312784 312791 GAGTTTGGAGAAGAG CTTTT-AAATAAGTTTCACA TCAAT TATGAAACTTATTTAAAAAG TTTTTCGTTTGAAGA TERM 320 312791 - 312831 + G 76 -11.6 -2.74314 | opp_overlap 312790 312789 312798 312801, overlap 312790 312790 312784 AGTTTGGAGAAGAGC TTTTAAATAAGTTTCACA TCAAT TATGAAACTTATTTAAAA AGTTTTTCGTTTGAA MADE_00286 312148 - 313299 + | hypothetical protein MADE_00287 313553 - 313894 + | probable C-5 cytosine-specific DNA methylase MADE_00288 314996 - 313977 - | hypothetical protein TERM 321 315794 - 315766 - g 81 -3.8 -5.40625 | AGAGGAGATAAAAAA GACCACTTGCCC TAGGT GCGGAAGTGATC TTGTTGAACGGCAAG MADE_00289 315125 - 315883 + | putative transmembrane protein TERM 322 316144 - 316132 - g 72 -4.8 -4.63542 | TACAACGGGTAAAAA CGCA ACAGA TGCG TCGATGATTATTGAT TERM 323 316636 - 316607 - g 74 -5.7 -4.66057 | opp_overlap 316608, overlap 316608 AGACAGAAAGGAAAA GGGACGACACAAA TTAT CTTGTACCGTCCT ATCTTCGCGACCACT TERM 324 316635 - 316608 - g 70 -9.2 -3.38007 | opp_overlap 316608, overlap 316607 GACAGAAAGGAAAAG GGACGACACAAA TTAT CTTGTACCGTCC TATCTTCGCGACCAC MADE_00290 315905 - 316654 + | hypothetical protein MADE_00291 316949 - 316656 - | ribonuclease H-related protein MADE_00292 317415 - 317008 - | hypothetical protein MADE_00293 318149 - 317682 - | hypothetical protein TERM 325 317804 - 317790 - G 71 -10 -3.14344 | opp_overlap 317785 TACCGCGCTTATCAA GAGGTC GAT GACCTC GGGAAGCTTTTCTTT MADE_00294 320198 - 318168 - | ATPase, AAA family protein TERM 326 318995 - 319021 + g 70 -8.8 -3.46008 | overlap 318993 318992 318993 CGTGAGCGACATGTG TTGCGTTAGCAA CAA TTGCTGGCGTAA TGTTCTCTGTTTGAC TERM 327 319728 - 319716 - G 74 -3.3 -4.98255 | CTCGAAGGACAAAAA GTCTG TAT CAGGC AGAAAACCATAATGA MADE_00295 321104 - 320211 - | site-specific recombinase, phage integrase family protein MADE_00296 321858 - 321226 - | hypothetical protein TERM 328 321470 - 321490 + g 76 -8.3 -4.08216 | opp_overlap 321475, overlap 321475 AGCCGACATTTATTA GCAATGTCT AAC AGACTTTGC TTTTCCAAAAAGTCA MADE_00297 322181 - 324286 + | hypothetical Membrane Spanning Protein MADE_00298 324455 - 325678 + | UvrD/REP helicase MADE_00299 325983 - 326870 + | SMF protein TERM 329 326996 - 326972 - g 74 -8.7 -3.87373 | opp_overlap 326970 TATACCGCCTATAAA GATTGGTCT TTTAGTG AGACCAATC AGCTTATTAAAAACT MADE_00300 326867 - 327100 + | hypothetical protein MADE_00301 327385 - 327528 + | hypothetical protein TERM 330 328328 - 328303 - T 73 -7.8 -3.84451 | TGTTCGAAACTTAAA TTCTCATTAA TCGAAG TTAATGAGAA TGGCCATGACCTTTG MADE_00302 328585 - 328319 - | hypothetical protein MADE_00303 329208 - 328696 - | hypothetical protein MADE_00304 329927 - 329229 - | hypothetical protein TERM 331 329868 - 329853 - G 72 -9 -3.54129 | TACACCGTGTGCAAA GGCTTC AAAC GAAGCC ATTGCACACAGAGAT MADE_00305 333078 - 329932 - | Heavy metal efflux pump CzcA MADE_00306 334329 - 333091 - | Secretion protein HlyD MADE_00307 335528 - 334326 - | Outer membrane efflux protein TERM 332 335564 - 335592 + r 72 -9.7 -3.01247 | opp_overlap 335569 335571, overlap 335571 TAAGCATACCACTCA CAAAATACCGATT GAT GATCGGTTTTTTG CTTAATTTTTTTCCA TERM 333 335571 - 335585 + r 87 -6.4 -5.33921 | opp_overlap 335571 335569, overlap 335564 ACCACTCACAAAATA CCGATT GAT GATCGG TTTTTTGCTTAATTT TERM 334 335693 - 335667 - R 90 -11 -4.15106 | opp_overlap 335673 335690, overlap 335673 GACTAAGTTTGAAAA TAAAAACCGTTC ACC GATCGGTTTTTA GAATAAATTTTAATG TERM 335 335673 - 335687 + r 73 -5.6 -4.63184 | opp_overlap 335667 335673 GTTTGAAAATAAAAA CCGTTC ACC GATCGG TTTTTAGAATAAATT TERM 336 335687 - 335673 - R 89 -5.6 -5.45802 | opp_overlap 335673, overlap 335667 GTTTGAAAATAAAAA CCGTTC ACC GATCGG TTTTTAGAATAAATT MADE_00308 336647 - 335703 - | peptidase M56, BlaR1 MADE_00309 336826 - 336656 - | Penicillinase repressor TERM 337 337113 - 337066 - R 70 -2.7 -5.0133 | opp_overlap 337103, overlap 337099 CACCCTTTTAAAAAA CCGATTAACGATAGGTATTAT ACATAG AGAGTACCGACCGGCAATCGG TTTTTATCTCAGTTT TERM 338 337103 - 337113 + r 76 -4.6 -5.01546 | opp_overlap 337066 337099 CATAGAGAGTACCGA CCGG CAA TCGG TTTTTATCTCAGTTT MADE_00310 338476 - 337187 - | site-specific recombinase, phage integrase family protein TERM 339 337256 - 337275 + g 72 -5 -4.63932 | GTCGCGCTCTGCGGT CTTTGCAC GTCT GTTCAAAG TTTTCTTAGACAATG TERM 340 338621 - 338654 + H 100 -16.9 -4.13014 | opp_overlap 338627, overlap 338627 CGAGGCACCATTATT CAGAAAGCCCTGCAT GAAA ATGCGGGGCTTTTTG TTTTAGCAGTCTAAC TERM 341 338648 - 338627 - H 84 -10.1 -3.93963 | opp_overlap 338621 338627 ACCATTATTCAGAAA GCCCTGCAT GAAA ATGCGGGGC TTTTTGTTTTAGCAG TERM 342 338627 - 338648 + H 100 -12.3 -5.45802 | opp_overlap 338627, overlap 338621 ACCATTATTCAGAAA GCCCTGCAT GAAA ATGCGGGGC TTTTTGTTTTAGCAG MADE_00311 339940 - 340458 + | putative metal-binding protein MADE_00312 340702 - 341472 + | methionyl-tRNA formyltransferase MADE_00313 341952 - 341839 - | hypothetical protein TERM 343 342077 - 342092 + r 75 -5.4 -4.70659 | opp_overlap 342062 CAGATGTGCGTTTTC CATCTG GCTC CAGGTG TTTTTCACTGTGAGC MADE_00314 343814 - 342408 - | sensory histidine kinase in two-component region TERM 344 342596 - 342572 - G 78 -5.7 -4.79667 | opp_overlap 342573, overlap 342573 AAAAGCGATCAAAAA GTCTCTGAAGA TGG TCATCAGAGAT TTTCGGGCCTGGATT TERM 345 342595 - 342573 - G 70 -9.2 -3.46174 | opp_overlap 342573, overlap 342572 AAAGCGATCAAAAAG TCTCTGAAGA TGG TCATCAGAGA TTTTCGGGCCTGGAT TERM 346 342573 - 342595 + g 79 -9.2 -4.09864 | opp_overlap 342573 342572 AAAGCGATCAAAAAG TCTCTGAAGA TGG TCATCAGAGA TTTTCGGGCCTGGAT MADE_00315 344481 - 343798 - | probable two component response regulator transcription regulator protein MADE_00316 344929 - 344807 - | hypothetical protein TERM 347 345588 - 345576 - g 72 -5.5 -4.40572 | opp_overlap 345576 345578 ACAATTTTTAGAAAA CCCTC CTG AAGGG GTTTTAGGGTTGAGC MADE_00317 345394 - 345738 + | transcriptional regulator, MerR family protein TERM 348 346752 - 346727 - g 70 -5.3 -4.52589 | opp_overlap 346742, overlap 346729 346742 TCTTTTTACAGAAAA CCGCCAAGACC AAGA GGTTTCGGCTG CCGTAAGCCTATCTG MADE_00318 345738 - 347102 + | putative cation efflux protein TERM 349 347422 - 347402 - g 82 -11.1 -3.60792 | opp_overlap 347396, overlap 347403 GTTCGAACTGCGAAA GTGCAGCGC CGC GCGCTGCAT GTCCCTATTAGAACT TERM 350 347421 - 347403 - g 87 -14.6 -2.76261 | opp_overlap 347396, overlap 347402 TTCGAACTGCGAAAG TGCAGCGC CGC GCGCTGCA TGTCCCTATTAGAAC TERM 351 347978 - 347994 + G 81 -12.3 -3.21807 | opp_overlap 347976 347973, overlap 347976 347971 CTTGAACAGAGTACC CGCACAC TGC GTGTGCG TCTTCGCTTTGCTAA MADE_00319 347099 - 349117 + | putative cation efflux system protein MADE_00320 349114 - 352251 + | cation efflux system protein CusA MADE_00321 352369 - 352497 + | hypothetical protein MADE_00322 352696 - 352562 - | hypothetical protein TERM 352 352887 - 352874 - g 70 -2.3 -5.02439 | ACATAACGATAAAAA GCACG ACAG CACGC ACGGCAACCATTAGA MADE_00323 352788 - 352901 + | hypothetical protein MADE_00324 352910 - 353824 + | putative copper export protein MADE_00325 353836 - 354315 + | putative orphan protein MADE_00326 354350 - 354832 + | L-asparaginase TERM 353 355108 - 355120 + G 78 -5.5 -4.77216 | ATAGCGTTCTGGGCC GCGGT AAT ATCGC TTTTTACGTATTATT MADE_00327 354847 - 355545 + | hypothetical protein TERM 354 355539 - 355554 + F 73 -5.4 -4.55798 | TTGGTTTAGCTCATC GGTGTA ACTA TGCACC TTTTACTTTGCCATA TERM 355 355726 - 355678 - f 77 -10.4 -3.30214 | gap 1, opp_overlap 355689, overlap 355689 AAGGCAGCAGAGTAA TGC-TTGATACACGCATATGCGC TTGC GCGCAAATGCGTGTGTCGATACA CTCTCGATATCAACG TERM 356 355714 - 355689 - f 90 -13.3 -2.88579 | opp_overlap 355689, overlap 355678 GTAATGCTTGATACA CGCATATGCGC TTGC GCGCAAATGCG TGTGTCGATACACTC TERM 357 355689 - 355714 + F 90 -13.3 -2.91582 | opp_overlap 355689 355678 GTAATGCTTGATACA CGCATATGCGC TTGC GCGCAAATGCG TGTGTCGATACACTC MADE_00328 355694 - 355819 + | hypothetical protein MADE_00329 355965 - 355816 - | hypothetical protein MADE_00330 356804 - 356049 - | hypothetical protein MADE_00331 357095 - 356814 - | hypothetical protein TERM 358 357231 - 357211 - R 75 -9.9 -3.27215 | AAATCGTCACAGCAA TGACTAAAA GTT TTTTAGTCA GGGCGCAGAAGAGAG MADE_00332 359342 - 357225 - | FAD linked oxidase, N-terminal TERM 359 359462 - 359439 - H 71 -9.8 -2.8502 | opp_overlap 359433, overlap 359436 359431 AAATAAAGTTAATGA TTTGATTACA GAAA TGTAATCAAA CCGTAATCGATTCGT MADE_00333 359776 - 359949 + | hypothetical protein MADE_00334 360012 - 360173 + | hypothetical protein MADE_00335 360300 - 360482 + | nitric oxide reductase, cytochrome c-containing subunit MADE_00336 360579 - 361010 + | hypothetical protein TERM 360 361027 - 361055 + F 86 -9.5 -3.97674 | opp_overlap 361020, overlap 361028 GCTAATCACCACGTT ACGAGGCAGGAGG TGA CCTGCTGTCTCGC TTATTTCAATAATCA TERM 361 361028 - 361054 + F 91 -13 -2.98122 | opp_overlap 361020, overlap 361027 CTAATCACCACGTTA CGAGGCAGGAGG TGA CCTGCTGTCTCG CTTATTTCAATAATC TERM 362 361411 - 361432 + G 72 -2.9 -4.92777 | overlap 361412 AAATTACGCGTTATG ACATGGTCG AGTT TGACCGTGG TTTTTGATTAATATT MADE_00337 361173 - 361439 + | hypothetical protein TERM 363 361614 - 361596 - g 70 -2.4 -5.05442 | AGACAAAAAAAACAA TTCATCAG AAA CTAAAGAA ACTCAGCCTGAGTTA TERM 364 361626 - 361616 - g 74 -5.4 -4.65182 | CAGAAACTAAAGAAA CTCA GCC TGAG TTAAACGTTGATGAC TERM 365 361817 - 361807 - g 77 -6.8 -4.51224 | opp_overlap 361814, overlap 361809 AAGAGTAAGAATAAA GGCA TGA TGCC AATGCGCGGGAAATC MADE_00338 361513 - 362301 + | putative exported protein of unknown function MADE_00339 362303 - 362422 + | hypothetical protein TERM 366 362595 - 362584 - g 72 -5.8 -4.45517 | AAATGATGGAGAAAA TGGG TGCA CCCA AACCTAAAGATCTCT MADE_00340 362487 - 364244 + | putative NADH oxidoreductase; putative nitric oxide dioxygenase MADE_00341 364244 - 365002 + | hypothetical protein TERM 367 365125 - 365105 - g 70 -2.5 -5.0538 | overlap 365107 TTCCATGGGAAAAAA TGGTTGAAC CCG GTTCACTCA GTAAGGCACATGCCT TERM 368 365400 - 365412 + G 74 -5.5 -4.57073 | overlap 365401 GTTTGACGAGGGCGC TGCCA CCA TGGCG TTTTTGGAGAACATA MADE_00342 365002 - 365793 + | putative exported protein of unknown function with cytochrome Cfamily domain MADE_00343 365911 - 367029 + | hypothetical protein TERM 369 367055 - 367039 - f 73 -5.9 -4.56736 | AGCTAATAAGGAAAA TACCGAT GCT ATCAGTA GAAACTACACCACCA MADE_00344 367044 - 367598 + | hydrogenase 2 maturation protease MADE_00345 367595 - 368029 + | HupH hydrogenase expression protein MADE_00346 368007 - 369029 + | Ni-Fe hydrogenase, small subunit TERM 370 369504 - 369522 + G 70 -2.4 -4.91712 | TTGCAACCCAATATG TGCATGAT CAC GTGATGCA TTTTTATCACTTGCA TERM 371 370659 - 370646 - g 70 -9.5 -3.05816 | GTAGGCGTGATGGAA GCGCC TCGT GGCGC GTTGGGGCATTGGTT MADE_00347 369047 - 370924 + | Ni-Fe hydrogenase large chain MADE_00348 371176 - 371385 + | hydrogenase assembly chaperone hypC/hupF MADE_00349 371441 - 371764 + | hydrogenase expression/formation protein HypA MADE_00350 371754 - 372500 + | hydrogenase accessory protein HypB TERM 372 372596 - 372613 + G 71 -10.5 -2.64651 | overlap 372593 372592 TTGCGGTGGCCATGA GCGTGCG ATTA CGCGCGC TGGATTTAGAACGTT MADE_00351 372507 - 373640 + | Hydrogenase formation HypD protein MADE_00352 373640 - 375946 + | Hydrogenase maturation protein HypF MADE_00353 375946 - 376998 + | Hydrogenase expression/formation protein HypE MADE_00354 377117 - 377527 + | putative Zn(II)-responsive transcriptional regulator, regulates Zn export (MerR family) protein TERM 373 379811 - 379833 + G 71 -10.6 -2.65298 | opp_overlap 379811, overlap 379810 ATACTGCTTAACCCA GTCATTGCTG GTG CAGCGATGGC ATTCTCATCACTAAC MADE_00355 377552 - 379900 + | Cation transport ATPase MADE_00356 379913 - 380266 + | putative secreted protein containing plastocyanin domain MADE_00357 380417 - 380259 - | hypothetical protein MADE_00358 380475 - 380636 + | hypothetical protein TERM 374 380795 - 380820 + G 71 -10.5 -2.71011 | AAATGTATGGTTTCC CCCTGACAATA TACT TCTTGTCAGGG TGGTTAGCGGAAAGT MADE_00359 380626 - 381279 + | predicted protein-S-isoprenylcysteine methyltransferase MADE_00360 381290 - 381637 + | hypothetical protein MADE_00361 382016 - 381666 - | hypothetical protein MADE_00362 383610 - 382033 - | transposase TERM 375 382939 - 382965 + g 72 -2.8 -4.98522 | TTGCCACTGGGCTTT GGCGATGGGTCG AAG CAGCTCAATGCC TTTTTGTATCCAGTT MADE_00363 383969 - 383634 - | Transposase and inactivated derivative MADE_00364 384253 - 383969 - | hypothetical protein MADE_00365 384328 - 384456 + | hypothetical protein MADE_00366 384569 - 384874 + | hypothetical protein TERM 376 384916 - 384890 - f 77 -10.2 -3.36273 | TTGGTTCAATAGCAA CGATCAGACTTA CGT TACGCCTGATCG TACAGCCATAACAAA MADE_00367 384950 - 385132 + | hypothetical protein TERM 377 385148 - 385166 + T 70 -3 -5.0916 | overlap 385150 AAGCGTGGCAAGTTT TAGCCGCT GGA AGGGGCAA TTTTTCTATTACCGG MADE_00368 386031 - 385534 - | Transposase MADE_00369 387167 - 386409 - | hypothetical protein MADE_00370 388043 - 387228 - | hypothetical protein MADE_00371 388476 - 388105 - | hypothetical protein TERM 378 389714 - 389727 + H 80 -2.3 -5.55769 | opp_overlap 389708 AGCAAAAATCTAAAA GTGGT CTTA GCCGC TTTTTTGTTGTGCGC TERM 379 389735 - 389746 + H 75 -3 -5.2204 | TTAGCCGCTTTTTTG TTGT GCGC ACAA TTTTTGTTGATTGTG TERM 380 390706 - 390688 - gH 76 -7.4 -4.23104 | GCAAAGGTGAATAAA GAGATAGC CCT GCAATCTC TCACACTATTCTGGC MADE_00372 390076 - 391356 + | putative RND efflux system protein TERM 381 391511 - 391501 - gf 72 -8.2 -3.7791 | opp_overlap 391501 TAAGTATCGATGAAA GCCC CGA GGGC TCTGTAATTATTGCC TERM 382 391620 - 391608 - gf 77 -4.9 -4.87786 | opp_overlap 391598 TCAAGCTCAGAAAAA TTTGA GTT TCAAA CTTCAGAGGGGGTTT TERM 383 392272 - 392251 - gf 75 -10.1 -3.22924 | opp_overlap 392263, overlap 392249 392263 TTGAAATCACTAATA CCGAAGGAG AATT CTCCCCCGG CGATATGGTTACAGG MADE_00373 391308 - 392540 + | HelB protein TERM 384 392573 - 392594 + G 91 -7.3 -5.52807 | opp_overlap 392572, overlap 392574 392584 GATTGATAATATTAT TCGTCTTTC AGTA GAAAGACGC TTTTTGTTTCTTGTT TERM 385 392574 - 392593 + G 84 -10.8 -3.88024 | opp_overlap 392572, overlap 392573 392584 ATTGATAATATTATT CGTCTTTC AGTA GAAAGACG CTTTTTGTTTCTTGT TERM 386 393278 - 393251 - g 76 -4.9 -4.89852 | gap 1, overlap 393253 CTATATTGAGAAAAA TGGCGAGC-AAC TTCTT GTTCGCTCTCCA GGTCAATTGACAGGG TERM 387 394764 - 394752 - g 76 -7.7 -4.33274 | TCCATATTACCAAAA CGAGA TGC TCTCG CAAGGTACGGTCTTA MADE_00374 392556 - 395663 + | putative RND efflux system protein MADE_00375 395707 - 396585 + | cation diffusion facilitator family transporter MADE_00376 396893 - 397084 + | hypothetical protein TERM 388 397354 - 397336 - T 74 -4.6 -4.98531 | overlap 397339 397347 GTCTCAAATCAAAAA TATCTACA CAA TGTAGCTA ACCACAACAGTGATG MADE_00377 397739 - 397329 - | putative diacylglycerol kinase (DAGK) MADE_00378 398629 - 397727 - | putative sulfatase MADE_00379 398718 - 399335 + | transposase MADE_00380 399362 - 400126 + | transposase and inactivated derivative MADE_00381 400870 - 400142 - | lipid A phosphoethanolamine transferase, associated with polymyxin resistance MADE_00382 402733 - 400991 - | glycosyl transferase, family 39 TERM 389 401896 - 401870 - GR 73 -8 -3.8917 | TGGCAACCAGAATAA TGGAATAACCTC TAC GAGGTAATACCA GAACGGCTTTATGTG TERM 390 402228 - 402209 - GR 79 -4.2 -5.1356 | gap 1 TCCCATGAAGAAAAA GGCG-AGGT AAT ACCAACGCC ATCGCCTTTCAACTA TERM 391 402554 - 402533 - GR 77 -6.5 -4.4891 | TTTATCAGGATAAAA CTCTCCCGC TCTG GCTGGAAAG AACCACTGACCTGTT MADE_00383 403424 - 402708 - | hypothetical protein MADE_00384 404159 - 403425 - | glycosyl transferase, group 2 family protein TERM 392 404507 - 404536 + H 74 -3.8 -5.08824 | AGACTCCGTGTAACG CTTTAGAATATT TAGTTT AATGTTTTAAAG TTTTTTCGCTCAGCC MADE_00385 405096 - 405740 + | transcriptional regulator MADE_00386 405724 - 407163 + | putative sensor transduction kinase (copper resistance) TERM 393 408931 - 408921 - g 72 -3.2 -5.02074 | GGATGCTGCAAAAAA TGGA TAA CCCA TTTAGAAAACCAAGG MADE_00387 408753 - 409271 + | putative metal-binding protein MADE_00388 409352 - 409705 + | putative copper resistance (CopC-like) protein TERM 394 409867 - 409843 - g 70 -10.1 -3.06651 | overlap 409840 409845 409848 TAATAGCACAAATTA TACAACGCCAT CTT ATAGCGCTGTA TGGGTAAAGGTTTGT MADE_00389 409727 - 410614 + | putative copper export protein TERM 395 410978 - 410988 + G 74 -8.2 -3.97947 | GCAACACAGCAATCT CCGC ATC GCGG TTTCTGGTCAATGGG MADE_00390 410680 - 411105 + | putative orphan protein TERM 396 411516 - 411526 + G 78 -5.4 -4.85782 | CTTTCAACAAAACGG GGTT TCA AACC TTTCTTTTTAAAAAA MADE_00391 411353 - 411604 + | hypothetical protein MADE_00392 411863 - 412699 + | methionyl-tRNA formyltransferase TERM 397 412725 - 412735 + F 100 -6.8 -5.53436 | opp_overlap 412724 412725 CTTTAATGTTTAAAG GTGC TAA GCAC TTTTTTGTGTTGTGT MADE_00393 412806 - 413228 + | hypothetical protein MADE_00394 413494 - 413928 + | putative Zn(II)-responsive transcriptional regulator, regulates Zn export (MerR family) protein TERM 398 415786 - 415775 - g 78 -5.8 -4.73677 | GGGACAACAAAGAAA CTGC TGCT GCAG TGGCAAAGAAAGCGG MADE_00395 414004 - 416247 + | Cation transport ATPase TERM 399 416393 - 416378 - g 76 -2.5 -5.35354 | CATAGAAGTAAAAAA TGGCG TGTACT CACCA GCGTCTATTCAGGTA MADE_00396 416277 - 416612 + | putative secreted protein containing plastocyanin domain MADE_00397 416783 - 416959 + | hypothetical protein MADE_00398 416985 - 417617 + | predicted protein-S-isoprenylcysteine methyltransferase TERM 400 417908 - 417890 - g 75 -3 -5.18357 | TAATGCACGAAAAAA TGGAAGGG CAA CCCATGCA AAACCAAGTTGATAT MADE_00399 417646 - 418011 + | hypothetical protein MADE_00400 418164 - 418400 + | hypothetical protein MADE_00401 418614 - 418745 + | hypothetical protein MADE_00402 418847 - 419002 + | hypothetical protein TERM 401 419022 - 419045 + T 77 -11.1 -2.7623 | opp_overlap 419022, overlap 419021 419017 419025 TGCCACGAGTAAAAA TAACCGGCA CGCTAA TGCCGGTTA ATTCCTTTCCTATTC TERM 402 419045 - 419022 - T 100 -11.8 -4.77036 | opp_overlap 419022 419021 419017 419025 TGCCACGAGTAAAAA TAACCGGCAC GCTA ATGCCGGTTA ATTCCTTTCCTATTC TERM 403 419025 - 419042 + T 72 -8.4 -3.51202 | opp_overlap 419022, overlap 419022 419021 419017 CACGAGTAAAAATAA CCGGCA CGCTAA TGCCGG TTAATTCCTTTCCTA MADE_00403 420483 - 419158 - | Amino acid permease-associated region TERM 404 420200 - 420190 - G 86 -4 -5.49729 | AACCATGGAAAAAAA CATT AGC AATG CACAGGCACCAGTCA TERM 405 420590 - 420623 + r 73 -5.4 -4.62069 | opp_overlap 420591 420595, overlap 420591 CGAAGACGTGTAGAA AGAAATAACTGGCA ATGGCA TACCAGTTATTTCA TTTTTAGCGTAGGGC TERM 406 420591 - 420622 + r 72 -8.9 -3.3692 | opp_overlap 420591 420595, overlap 420590 GAAGACGTGTAGAAA GAAATAACTGGCA ATGGCA TACCAGTTATTTC ATTTTTAGCGTAGGG TERM 407 420622 - 420591 - R 86 -11.1 -3.89501 | opp_overlap 420590 420591, overlap 420595 GAAGACGTGTAGAAA GAAATAACTGGCA ATGGCA TACCAGTTATTTC ATTTTTAGCGTAGGG TERM 408 420618 - 420595 - R 77 -6.1 -4.55697 | opp_overlap 420591 420590, overlap 420591 ACGTGTAGAAAGAAA TAACTGGCA ATGGCA TACCAGTTA TTTCATTTTTAGCGT MADE_00404 421348 - 420641 - | hypothetical protein MADE_00405 423211 - 421397 - | Multicopper oxidase TERM 409 423181 - 423203 + g 71 -3.5 -4.88129 | gap 1 CAGCGAGCACAAATC TTCTG-CGAC CGTT GTCGATAGAA TTTTTCATAGTTTTT MADE_00406 424581 - 423877 - | hypothetical protein MADE_00407 425014 - 424601 - | hypothetical protein MADE_00408 426491 - 426300 - | site-specific recombinase, phage integrase family protein MADE_00409 426810 - 426926 + | hypothetical protein TERM 410 426985 - 427016 + F 89 -9.5 -4.23391 | gap 1 CAAGACTGCCTTTTA GCTTGGTGC-AGCG GCTAA CGCTAGCAGCAAGC TTTGTGATTTGTTTA TERM 411 427087 - 427099 + F 85 -4.1 -5.66684 | overlap 427088 CTGCCAGTTCGCGAT TTCTC AAG GAGAG TTTTTTTGTCAGTTA TERM 412 427376 - 427360 - g 77 -3.6 -5.21709 | opp_overlap 427360 GCTGATATCAAAAAA GCGAGC GACGA GCTAGC TTTGTCTTTAAGTAC MADE_00410 427105 - 428289 + | methyl-accepting chemotaxis protein MADE_00411 428346 - 428711 + | chemotaxis protein CheY TERM 413 428706 - 428722 + F 76 -10.9 -2.66183 | overlap 428705 ACGCGCCGCGTATTG GGTTAGG TCG CCTAACC ATTCCTATTATCTGG TERM 414 429377 - 429390 + G 78 -6.7 -4.69664 | opp_overlap 429377 429375 GCAAAGCTGAAGAGA GCCAA GGGT TTGGC TTTTTCGATGATGTG TERM 415 429588 - 429578 - g 76 -2.4 -5.40072 | opp_overlap 429579, overlap 429579 CTTCCGCTAAAAAAA GCGC AGT GCGT GAGTCTGCGTCTATT MADE_00412 428749 - 430773 + | probable two-component sensor (CheA) MADE_00413 430770 - 431078 + | purine-binding chemotaxis protein CheW TERM 416 431288 - 431270 - g 74 -6 -4.65747 | overlap 431271 CAAGCGTGAATAAAA CTGCCGAA GAG TTCGACAA AATGCAGGGGATGGC MADE_00414 431167 - 431676 + | CheD TERM 417 432109 - 432087 - g 78 -6.3 -4.62772 | gap 1, overlap 432088 432089 TCTAAAGTAAAGAAA GC-GACGCCT GCTA AGGCATCAGC GGTAAGCAAAGTGAA MADE_00415 431679 - 432725 + | chemotaxis-specific methylesterase TERM 418 433179 - 433169 - g 71 -6.8 -4.02719 | overlap 433162 TTATGAAACAGCAAA CGCT AGT AGCG CTATCGGCCTTAATG MADE_00416 433156 - 433416 + | hypothetical protein MADE_00417 433640 - 433413 - | hypothetical protein TERM 419 433467 - 433498 + g 79 -10.4 -3.53012 | opp_overlap 433469 433474, overlap 433474 TAGCGCTAATACGAA TAGAAAAGTCTTAC CTAG GTAAGACTTTTTTG TTTGCCCAGCGAAGC TERM 420 433474 - 433491 + g 100 -8.5 -5.63517 | opp_overlap 433474 433469, overlap 433467 AATACGAATAGAAAA GTCTTAC CTAG GTAAGAC TTTTTTGTTTGCCCA TERM 421 433491 - 433474 - G 84 -8.5 -4.73094 | opp_overlap 433467 433474, overlap 433469 AATACGAATAGAAAA GTCTTAC CTAG GTAAGAC TTTTTTGTTTGCCCA TERM 422 433560 - 433540 - G 70 -4.7 -4.42806 | overlap 433549 TCAGGTTGAAAGAAA CCTGAATCA CCC TGACTGAGG GGAAGATAATCCGAA MADE_00418 433845 - 433997 + | hypothetical protein MADE_00419 434236 - 434349 + | hypothetical protein TERM 423 435048 - 435025 - g 72 -5.4 -4.48877 | gap 1, opp_overlap 435028, overlap 435027 435029 TAAACACGGATAAAA CACACATCACT CAC AGTGATG-ATG GTGTGAAGTTCCTTG TERM 424 435045 - 435029 - g 75 -9.5 -3.49186 | opp_overlap 435028, overlap 435025 435027 CACGGATAAAACACA CATCACT CAC AGTGATG ATGGTGTGAAGTTCC TERM 425 435321 - 435311 - g 84 -8.2 -4.68424 | CAAGTTATGGAAAAA GGCG AGC CGCC TCCATCGCTGGCTAA MADE_00420 434502 - 435506 + | hypothetical maturase TERM 426 435618 - 435604 - T 88 -11.4 -3.61398 | TTTGTGCTGCAATAA CACGGG AAA CCCGTG CAGAATGAAACATTA MADE_00421 436356 - 435631 - | Cryptic haloacid dehalogenase 1 TERM 427 436505 - 436480 - R 100 -9 -5.64321 | opp_overlap 436474 436480 ATAAGAAAATAAAAA GCCGGCATAA AAAGAG TGATGCCGGC TTAGTATTTTACAAG TERM 428 436480 - 436505 + r 74 -9 -3.53779 | opp_overlap 436480, overlap 436474 ATAAGAAAATAAAAA GCCGGCATAA AAAGAG TGATGCCGGC TTAGTATTTTACAAG MADE_00422 438332 - 436533 - | GGDEF family protein TERM 429 437479 - 437500 + g 70 -2.3 -5.00895 | gap 1, overlap 437480 TCGGGCAGGGTGTAA GCCAAG-CTA GTA TAGTCTTGGG TTTTTCTATAATAAA TERM 430 438127 - 438111 - G 76 -4.3 -4.98531 | GCGGCAAATCAAAAA CTGCCCC TTT GCGACAG TCAGTGCGAAACGCT TERM 431 438212 - 438196 - G 75 -6.5 -4.49958 | opp_overlap 438198 AGTTGAGGAAACAAA GACTGGC TAG GACAGTC GTATGAAGGAGTGCG TERM 432 438422 - 438392 - R 82 -7.7 -4.51097 | overlap 438393 GGAAGTACTACAAAA GCCCCATAAAAAA AGCGG CTTTTTATGGGGG CGGGGGGAGAGGTTT TERM 433 438421 - 438393 - R 85 -11.2 -3.29935 | overlap 438392 GAAGTACTACAAAAG CCCCATAAAAAA AGCGG CTTTTTATGGGG GCGGGGGGAGAGGTT MADE_00423 439359 - 438475 - | predicted permease, DMT superfamily protein TERM 434 438829 - 438814 - G 74 -6 -4.67904 | opp_overlap 438814 438822, overlap 438805 CACTAAGCGTAAAAA CGCGGC ACTG GCAGCG TCAATTTCACCCGCG TERM 435 438997 - 438984 - G 73 -2.3 -5.23292 | overlap 438987 CGACAGAAAACAAAA CAACG GCTA CGCCG ACCCACTGTTGCCAG TERM 436 438997 - 438987 - G 84 -8.2 -4.66746 | overlap 438984 CAGAAAACAAAACAA CGGC TAC GCCG ACCCACTGTTGCCAG TERM 437 439220 - 439179 - G 81 -8.1 -4.44915 | gap 1, overlap 439181 439182 439212 CAAGCAGCCATAAAA CAGTGCTAGTGG-TAAGCCC TGT AGGCTGAACCACTAGCAGTA CTGCCGCTAAAATGG TERM 438 439218 - 439181 - G 72 -8.5 -3.82519 | gap 1, overlap 439179 439182 439212 AGCAGCCATAAAACA GTGCTAGTGG-TAAGCCC TGT AGGCTGAACCACTAGCAG TACTGCCGCTAAAAT TERM 439 439217 - 439182 - G 77 -12 -2.88788 | gap 1, overlap 439181 439179 439212 GCAGCCATAAAACAG TGCTAGTGG-TAAGCCC TGT AGGCTGAACCACTAGCA GTACTGCCGCTAAAA TERM 440 440067 - 440090 + G 73 -10.4 -2.99319 | gap 1, opp_overlap 440064, overlap 440087 440088 TGGTGGCGAACACCT GGCAG-CTTCA ACC TGAAGACTGCC TGTATGTAGGCGATT MADE_00424 439643 - 440161 + | putative hydrolase/phosphatase protein MADE_00425 440320 - 440165 - | hypothetical protein TERM 441 442313 - 442301 - g 81 -3.3 -5.28176 | opp_overlap 442301 TGGATGGATAAAAAA GGGCA GCA TGCAC TCTACTTACCCGAGA TERM 442 442850 - 442836 - g 75 -2.8 -5.24129 | overlap 442838 GCTCGTTAGAAAAAA TCTCTG ATA CAGATA TGGGGACGCGCAAAG TERM 443 443445 - 443431 - g 71 -7.2 -4.11216 | TTCGCACGCTGAAAA TTTGTC GCC GACAAA TGCTGAGACAAGCAA MADE_00426 440399 - 444241 + | putative two-component system sensor kinase/response regulator fusion protein MADE_00427 444583 - 444260 - | hypothetical protein TERM 444 444658 - 444645 - R 73 -6.7 -4.19506 | opp_overlap 444644 444645 444656, overlap 444656 ACGGTAAGGTCAAAA GCGTT AGCT AACGC CTTTATTAAGTGCGC MADE_00428 445652 - 444648 - | Twin-arginine translocation pathway signal MADE_00429 446660 - 445656 - | transcriptional repressor, LacI family protein MADE_00430 447058 - 448191 + | oxidoreductase, Gfo/Idh/MocA family protein MADE_00431 448228 - 449295 + | Xylose isomerase-like TIM barrel TERM 445 450062 - 450048 - g 73 -10 -3.40597 | overlap 450046 450059 TTTCTTACCGAAATA GGCGTT GAA AACGCC ACGGGCAAAATGACA MADE_00432 449346 - 450539 + | putative nucleoside permease protein MADE_00433 450532 - 451461 + | Twin-arginine translocation pathway signal MADE_00434 451506 - 453191 + | oxidoreductase MADE_00435 453191 - 453808 + | Twin-arginine translocation pathway signal MADE_00436 453796 - 454641 + | putative multi-domain protein MADE_00437 455786 - 454638 - | Iron-containing alcohol dehydrogenase TERM 446 454725 - 454706 - G 76 -9.3 -3.75738 | opp_overlap 454706 GATTATTACGAAGAA GGCGAGT TACTTT ACTCGCC TCTTCCGCTAACTCA TERM 447 455221 - 455248 + g 74 -3.4 -4.95155 | gap 1 AATGCGTCTATTCCG CTTG-CGGCCGTT ATA GACGGTGGGCAAG TTTTTGTCATCTCAG TERM 448 455523 - 455492 - G 71 -9.5 -3.14132 | overlap 455463 455494 CTTTTGCGCTATCAA TAGCACTACCGCC ACCAAG GGCGATAATGCCA TCTACCTTATTCTCG TERM 449 455521 - 455494 - G 71 -9.9 -3.13403 | overlap 455463 455492 TTTGCGCTATCAATA GCACTACCGCC ACCAAG GGCGATAATGC CATCTACCTTATTCT TERM 450 458778 - 458766 - H 85 -9.1 -4.2354 | GAAAGGCGAAAAGAA CCCCT GTG AGGGG AGTGAAATAGAACCT TERM 451 459566 - 459548 - H 74 -8.9 -3.54743 | overlap 459561 CATGAGTAACGATAA TGGGAGT GAAAA ACTCCCA CGCCGGAAGACCAAG TERM 452 461550 - 461565 + H 100 -11.8 -5.42514 | opp_overlap 461550 TCCCATTAAGAAGAA CCCGCC TAAC GGCGGG TTTTTTGCTTTCTGA TERM 453 461565 - 461550 - H 91 -11.8 -3.99374 | opp_overlap 461550 TCCCATTAAGAAGAA CCCGCC TAAC GGCGGG TTTTTTGCTTTCTGA MADE_00438 461725 - 462726 + | branched-chain amino acid aminotransferase TERM 454 462750 - 462777 + T 79 -11.4 -2.61888 | opp_overlap 462756, overlap 462756 462771 TAGTTAGATACCCAT AAAAAAGCCTGC TTCA GCAGGCTTTTTA GTATTTAAAAGGTTT TERM 455 462756 - 462771 + T 93 -10.4 -4.93696 | opp_overlap 462756, overlap 462750 GATACCCATAAAAAA GCCTGC TTCA GCAGGC TTTTTAGTATTTAAA TERM 456 462771 - 462756 - T 100 -10.4 -5.29782 | opp_overlap 462756 462750 GATACCCATAAAAAA GCCTGC TTCA GCAGGC TTTTTAGTATTTAAA MADE_00439 463543 - 462797 - | phosphoglyceromutase TERM 457 463423 - 463433 + g 71 -6.8 -4.02108 | opp_overlap 463404 463403 CATCTTTAAGAAGCT GACC TGC GGTC TTTGCTTGTGCTACA MADE_00440 464181 - 463720 - | hypothetical protein TERM 458 464142 - 464129 - G 70 -2.3 -4.91511 | ACCTGACGATAAAAA CCTCC CTCG GGATG AGGTTCAAGTTTGTA MADE_00441 464656 - 467373 + | aconitate hydratase 1 TERM 459 467399 - 467425 + T 100 -16.6 -5.09685 | opp_overlap 467399 TAAACATTAATTAAA GCGACGACTCGA AAA TCGAGGCGTCGC TTTTTATATGTATTA TERM 460 467425 - 467399 - T 100 -16.6 -4.02075 | opp_overlap 467399 TAAACATTAATTAAA GCGACGACTCGA AAA TCGAGGCGTCGC TTTTTATATGTATTA MADE_00442 467932 - 467438 - | hypothetical protein TERM 461 467576 - 467590 + g 90 -7.1 -5.37593 | opp_overlap 467576 TAGAGCAGTAATGTA GCCCT CAGGA AGGGC TTTTTTAATTTGACG TERM 462 467935 - 467946 + r 86 -4.4 -5.4492 | TAAGCTTTTTCATTG GGAA TCCC TTCC TTTTTTATCTATATA TERM 463 468041 - 468070 + r 77 -7.9 -4.30719 | TGGGAAAACTCGCAG CCACACTAACTAG CTAG CTAATAAGTGTGG TTTATTCTCCACCAA MADE_00443 470288 - 468072 - | Bacterial type II secretion system protein E:GAF domain TERM 464 468584 - 468595 + g 77 -7.2 -4.55295 | AAGACGCTTCTATAC CGGC GTGC GCCG TTTCTTTATCACGCA TERM 465 468666 - 468651 - G 74 -5.4 -4.65895 | gap 1 GTCGGCACGTAAAAA TGC-GCG CAA CGCTGCA GCAAAGTTAAAGCCA TERM 466 469150 - 469167 + g 89 -4 -5.65177 | CCATCAACTCGCATC CGCACC CGTGTT GGCGCG TTTTTTTCTGGGTCT TERM 467 469665 - 469679 + g 74 -5.7 -4.61199 | opp_overlap 469665 GTACTCAGATACTAA GCGTT GGATA AACGC TTTTATATCTGGCGT TERM 468 470609 - 470599 - H 85 -5.4 -5.24129 | opp_overlap 470604, overlap 470604 470605 GCGTGCTAGAAAAAA GAAC AGG GTTC CGATTGGGAACCATC MADE_00444 470706 - 471017 + | 30S ribosomal protein S10 TERM 469 471436 - 471414 - g 72 -8.5 -3.737 | gap 1, opp_overlap 471416 CAAGGTGCTATCAAA CGCTG-GAAC TTCA GTTCTCAGCG CATGACACATGGTAA MADE_00445 471036 - 471674 + | 50S ribosomal subunit protein L3 TERM 470 472008 - 471991 - g 78 -4.9 -4.91987 | gap 1, overlap 471995 AAGTTAACAAGAAAA TGTATCGC GGT GCGAT-CA AGAGCATCTTGTCTG MADE_00446 471693 - 472298 + | 50S ribosomal protein L4 TERM 471 472332 - 472318 - f 75 -10 -3.0701 | opp_overlap 472313 472313 AGAACGTCTACTGAA GGTGCT AGT AGCACC TCACGTTTCAGAAAA MADE_00447 472355 - 472594 + | 50S ribosomal protein L23 TERM 472 473389 - 473349 - g 70 -10.5 -2.50816 | overlap 473348 TCGTCACCCAGTAAC TCCTTGGGGTGTTCCTACC AAA GGTAAGAAAACCCGAAGCA ACAAGCGTACTGATA MADE_00448 472609 - 473433 + | 50S ribosomal protein L2 MADE_00449 473563 - 473724 + | 30S ribosomal protein S19 MADE_00450 473736 - 474068 + | ribosomal protein L22 MADE_00451 474078 - 474509 + | 30S ribosomal protein S3 TERM 473 474568 - 474555 - g 70 -9.5 -2.9818 | overlap 474554 GTAAGATGCACAAAG GCCGC AACC GCGGC TTCGCAGCGGGTAGC MADE_00452 474512 - 474922 + | 50S ribosomal protein L16 MADE_00453 474922 - 475113 + | ribosomal protein L29 MADE_00454 475113 - 475370 + | ribosomal protein S17 MADE_00455 475564 - 475367 - | hypothetical protein TERM 474 475393 - 475422 + g 95 -14.5 -3.53012 | opp_overlap 475400, overlap 475400 CTTTTTTCAAAGTCT TAAAAAAGCCGCT TTCG AGCGGCTTTTTTG TTTGCCCAGCGAAGC TERM 475 475415 - 475400 - G 100 -10.4 -5.07107 | opp_overlap 475400 475393 CAAAGTCTTAAAAAA GCCGCT TTCG AGCGGC TTTTTTGTTTGCCCA TERM 476 475400 - 475415 + g 100 -10.4 -5.63517 | opp_overlap 475400, overlap 475393 CAAAGTCTTAAAAAA GCCGCT TTCG AGCGGC TTTTTTGTTTGCCCA TERM 477 475484 - 475464 - G 70 -4.7 -4.42806 | overlap 475473 TCAGGTTGAAAGAAA CCTGAATCA CCC TGACTGAGG GGAAGATAATCCGAA MADE_00456 475769 - 475921 + | hypothetical protein TERM 478 476973 - 476950 - g 72 -5.4 -4.48877 | gap 1, opp_overlap 476953, overlap 476952 476954 TAAACACGGATAAAA CACACATCACT CAC AGTGATG-ATG GTGTGAAGTTCCTTG TERM 479 476970 - 476954 - g 75 -9.5 -3.49186 | opp_overlap 476953, overlap 476950 476952 CACGGATAAAACACA CATCACT CAC AGTGATG ATGGTGTGAAGTTCC TERM 480 477246 - 477236 - g 84 -8.2 -4.68424 | CAAGTTATGGAAAAA GGCG AGC CGCC TCCATCGCTGGCTAA MADE_00457 476160 - 477431 + | hypothetical maturase MADE_00458 478665 - 477574 - | glycosyl transferase, group 1 family protein TERM 481 478031 - 478042 + g 73 -2.2 -5.1675 | AACAGTAGGCAGGTT GCGT TTTT ATGC TTTTTTACTACGTCC TERM 482 478511 - 478472 - G 73 -8 -4.08945 | gap 1, opp_overlap 478480 478481, overlap 478481 AGCATTCGTTTAAAA CCCATTAAAT-CAGTATCG CCA CGATACCGAATTGTATGGG TGGTACAACGGTTAA TERM 483 478501 - 478481 - G 84 -10.5 -3.84284 | opp_overlap 478481 478480, overlap 478472 TTAAAACCCATTAAA TCAGTATCG CCA CGATACCGA ATTGTATGGGTGGTA MADE_00459 479773 - 478694 - | lipopolysaccharide heptosyltransferase-1, putative TERM 484 480057 - 480043 - g 76 -2.1 -5.40464 | CACCAGAAATAAAAA CTACA ACCGA CGTAG GTTTGAGCGCTTTGG MADE_00460 479903 - 481213 + | 3-deoxy-D-manno-octulosonic-acid transferase TERM 485 481427 - 481439 + T 71 -6.9 -4.07568 | CTTTTAAAAAGGGCA CTGCG TTA CGCGG TTTTCCAGGGAGAGG TERM 486 481454 - 481477 + T 100 -18.2 -4.36596 | GTTTTCCAGGGAGAG GCCTCCTGCC GGTG GGCAGGAGGC TTTCTTACTTATCAC MADE_00461 483202 - 481493 - | Na+/H+ antiporter MADE_00462 483620 - 484450 + | hypothetical protein MADE_00463 484696 - 485229 + | hypothetical protein MADE_00464 487238 - 485328 - | methyl-accepting chemotaxis protein TERM 487 487119 - 487102 - G 71 -7 -4.0825 | opp_overlap 487101 487094 487102 TGTTTAAGCAAAGAA GGAAGC TGAAGG GCTTCC ATGTTTTCTTTTACT TERM 488 487490 - 487528 + r 72 -8.8 -3.54602 | opp_overlap 487495, overlap 487495 TTGAAAAAGGGTATA AAAAAGGCGAGCGGTACA AGT TGTGTCGCTCGCCTGTCA TTGTAGTGTTACTTA TERM 489 487495 - 487523 + r 100 -17.5 -2.99188 | opp_overlap 487495, overlap 487490 AAAGGGTATAAAAAA GGCGAGCGGTACA AGT TGTGTCGCTCGCC TGTCATTGTAGTGTT TERM 490 487523 - 487495 - R 100 -13.1 -5.28826 | opp_overlap 487495 487490 AAAGGGTATAAAAAA GGCGAGCGGTACA AGT TGTGTCGCTCGCC TGTCATTGTAGTGTT MADE_00465 489730 - 487541 - | peptidyl-dipeptidase Dcp TERM 491 489639 - 489658 + g 87 -7.1 -5.18726 | GCAGTTTGTGTATCG GCGCCAG TTGTTT CTGGTGC TTTTTGTTCTGAACA MADE_00466 489977 - 490504 + | formyltetrahydrofolate deformylase TERM 492 490515 - 490566 + T 100 -13.1 -4.47271 | gap 1, opp_overlap 490519, overlap 490517 TCTAAAGCTAGATTT CAAACGCCCGACAGTAAAAGCTCA GCCGG TGGGCTTT-ACTGTCGGGCGCAGG TTTTACTTAAATTTA TERM 493 490517 - 490564 + T 93 -14.3 -2.55282 | gap 1, opp_overlap 490519, overlap 490515 TAAAGCTAGATTTCA AACGCCCGACAGTAAAAGCTCA GCCGG TGGGCTTT-ACTGTCGGGCGCA GGTTTTACTTAAATT TERM 494 490562 - 490519 - T 100 -19.1 -3.64371 | gap 1, opp_overlap 490517 490515 AAGCTAGATTTCAAA CGCCCGACAGTAAAAGCTCA GCCGG TGGGC-TTTACTGTCGGGCG CAGGTTTTACTTAAA MADE_00467 491416 - 490613 - | formyltetrahydrofolate deformylase MADE_00468 491459 - 491572 + | hypothetical protein MADE_00469 492343 - 491690 - | 2,5 RNA ligase TERM 495 492219 - 492236 + g 72 -2.6 -5.055 | overlap 492218 492217 TTGTTGCCAGACTTT CGAGAC CTGCTC GACTCG TTTTTTACCCATTGG MADE_00470 492587 - 495271 + | ATP-dependent helicase HrpB TERM 496 495376 - 495337 - T 80 -10.8 -3.34468 | overlap 495335 495333 CTTTAATTAAATATA TTCGCACTAGCGCGCTTT TAAC AAAGCGCGCTAAATCAAA AATTAGGACTGTGAA MADE_00471 496644 - 495379 - | membrane-bound lytic transglycolase-related protein TERM 497 495748 - 495728 - G 86 -8.9 -4.4715 | overlap 495730 TTGTAAGCGATAAAA GCCGGGCCA TTG TGACCCGCC GGTACAATCACATAG TERM 498 495788 - 495801 + g 70 -2.3 -5.03145 | TCGCCTTCACCTAAT GGCGA ACCA TCGGC TTTTTTCACACCTTG MADE_00472 497043 - 499271 + | penicillin-binding protein 1B MADE_00473 499533 - 499417 - | hypothetical protein MADE_00474 499835 - 499539 - | hypothetical protein MADE_00475 500146 - 500006 - | hypothetical protein MADE_00476 501177 - 500248 - | hypothetical protein TERM 499 500461 - 500449 - G 71 -3.3 -4.90266 | overlap 500451 500452 TCCACCAACTAAAAA CATGG CAA CCGTG CCCACAACAGCCAGC TERM 500 501334 - 501361 + H 93 -13.6 -3.11178 | opp_overlap 501340, overlap 501340 ATAGAAAGCGTGAGT TGAGAAGAGCAT CGTC GTGCTCTTCTCA TGTTGACCTTAATTA MADE_00477 501636 - 502271 + | AraC-type DNA-binding domain-containing protein MADE_00478 503135 - 502320 - | hypothetical protein TERM 501 503256 - 503272 + H 71 -5.1 -4.52873 | opp_overlap 503238 503256, overlap 503238 503251 GCATTTTTTTCAACA TGCACCA TTG TTGTGCA TTATTTTTGTGCAAG MADE_00479 503418 - 503756 + | nitrogen regulatory protein P-II TERM 502 503811 - 503827 + G 73 -2.3 -5.20781 | TCACTTTTGAACTTG GGTAT GCGCTAG ATACC TTTTATTTTCTAATC MADE_00480 503789 - 505036 + | putative ammonium transporter TERM 503 505097 - 505114 + F 100 -14.1 -5.27477 | ATTACTTCCTTTTAA GCCCCGC AATT GCGGGGC TTTTTTCGTTAAGGT TERM 504 505181 - 505163 - f 70 -3 -5.1615 | GGAATAGTGAAAAAA GGCACTGT AGA AAAGGGCC TAGGCGTAATGTGAC TERM 505 506345 - 506327 - g 83 -9.6 -4.19238 | opp_overlap 506316 CTGCTAAGCGCAAAA CGCTCATT GAT AACGAGCG GGCAGCAAACCGTGT MADE_00481 505270 - 506961 + | gamma-glutamyltranspeptidase MADE_00482 507123 - 508049 + | putative melanin biosynthesis protein TyrA MADE_00483 509195 - 508119 - | adenylate cyclase TERM 506 508746 - 508734 - G 72 -9.1 -3.62597 | TTGATGGTCGAATAA CGCCA TAA TGGCG TCACCCATAAACTTA TERM 507 509167 - 509179 + g 72 -9.1 -3.49475 | opp_overlap 509166 509165 509162 CTGTAAATTACAAGT GCGCA TAG TGCGC TTGTCTGCCAATCCA MADE_00484 510688 - 509372 - | Glutamate-1-semialdehyde aminotransferase TERM 508 509470 - 509451 - GR 86 -7.8 -4.86731 | opp_overlap 509436 509432 GCTTTTGAAACAAAA CCTGCTTC ATAA GAGGCAGG TGCCAGGTAGACGCC MADE_00485 511721 - 510657 - | aspartate carbamoyltransferase TERM 509 511062 - 511082 + gr 83 -8.9 -4.08767 | opp_overlap 511061 AATCGCATCAATGAT GGGCTGGGG CAT CGCCAGCTC TTTTGGCGAAATAAG MADE_00486 512476 - 511802 - | transcriptional regulator, TetR family protein TERM 510 513168 - 513185 + G 80 -5.5 -5.08824 | TATTTCTCCTTTTGA CGGCG TAGTCAAT CGCCG TTTTTTAGATGAAGG MADE_00487 512593 - 513732 + | efflux transporter, RND family, MFP subunit TERM 511 513768 - 513780 + G 74 -3.3 -5.00616 | opp_overlap 513764 513763 513762, overlap 513769 AAAGACAAATCGTAC CCGTG GTA CACGC TTTTTTACCGCCGAG TERM 512 515564 - 515539 - g 76 -2.5 -5.44119 | gap 1, overlap 515543 CCTACGTTAAAAAAA TTGAT-AGCGCG ATA CGCGCAGAGCAA AGTGTAAAGCAAGTA TERM 513 515950 - 515932 - g 74 -3.8 -4.93968 | overlap 515925 515936 AGCCAGAATTAAAAA TTAACGCT GAT AGCGACAA CTTATCGTATTTAGG TERM 514 516099 - 516115 + G 70 -10.1 -3.05844 | opp_overlap 516092 AGGCAAAATGTAACG GGCGTCG ATG CGATGCC TATTCCAGTGGCCGG MADE_00488 513732 - 516878 + | AcrB/AcrD/AcrF family protein MADE_00489 517043 - 517759 + | hypothetical protein MADE_00490 520884 - 517756 - | sensor protein BarA TERM 515 520574 - 520555 - G 74 -3.6 -4.99947 | TTTAACCAAATAAAA GTCAAC GCTATCTA GTTGAC TGAAGTTAATTGTAA MADE_00491 521065 - 521205 + | hypothetical protein TERM 516 522071 - 522056 - g 74 -5.4 -4.63184 | gap 1, overlap 522033 AATGCAGGCTAAAAA GCTG-CC TAT GGTCAGC GACCTTCGCGATGAA MADE_00492 521202 - 523487 + | DNA topoisomerase IV, subunit A MADE_00493 523551 - 524090 + | 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase MADE_00494 524100 - 526262 + | sensory box protein TERM 517 526366 - 526337 - T 78 -10.9 -3.08798 | opp_overlap 526345, overlap 526345 ATGGGTCAGCGAATA CAAAAAAAGCCCA ACAA TGGGCTTTTTTCA CCACCCGTGGTTTAT TERM 518 526358 - 526345 - T 100 -8.1 -5.80817 | opp_overlap 526345, overlap 526337 GCGAATACAAAAAAA GCCCA ACAA TGGGC TTTTTTCACCACCCG TERM 519 526345 - 526358 + T 86 -8.1 -5.00616 | opp_overlap 526345 526337 GCGAATACAAAAAAA GCCCA ACAA TGGGC TTTTTTCACCACCCG MADE_00495 527156 - 526383 - | hypothetical protein TERM 520 527281 - 527255 - g 95 -12.2 -4.09864 | opp_overlap 527256, overlap 527256 AGCTAGGTGCGAAAA TGGCCGAAGCGC ACG GTGCTTCGGCCT TTTTAGATAACGTGA TERM 521 527280 - 527256 - g 93 -15.7 -3.05597 | opp_overlap 527256, overlap 527255 GCTAGGTGCGAAAAT GGCCGAAGCGC ACG GTGCTTCGGCC TTTTTAGATAACGTG TERM 522 527256 - 527280 + G 100 -17.9 -4.66609 | opp_overlap 527256 527255 GCTAGGTGCGAAAAT GGCCGAAGCGC ACG GTGCTTCGGCC TTTTTAGATAACGTG MADE_00497 527188 - 527313 + | hypothetical protein MADE_00496 528774 - 527305 - | succinylglutamic semialdehyde dehydrogenase MADE_00498 529825 - 528788 - | arginine N-succinyltransferase MADE_00499 531054 - 529846 - | bifunctional N-succinyldiaminopimelate-aminotransferase/ acetylornithine transaminase protein MADE_00500 532741 - 531521 - | putative signal transduction protein TERM 523 531577 - 531602 + g 78 -5.5 -4.77165 | gap 1, overlap 531579 531580 TATCGATAGTTTTAA GT-TTCTCAAGG GCC CCTTGAGGGTAC TTTTGTTCTACAAAA TERM 524 531808 - 531858 + g 74 -7.1 -4.21812 | gap 2, opp_overlap 531821 531822, overlap 531822 TGATGTCGGCACTTA CTGCATCGGCAAA-C-TCTTGTTGC ATA GCAATAAGATGATTTGCTGAGGGAG TTATTTTAAGTAAGG MADE_00501 533566 - 532982 - | P-aminobenzoate synthetase, component II TERM 525 533609 - 533639 + r 95 -14 -3.72893 | opp_overlap 533604 533603 TAGGCGAAAGTGATG GCCACGAAGGGTGA TAC TTGCCCGTCGTGGC TTTCATAACAAACTG MADE_00502 534673 - 533666 - | tryptophanyl-tRNA synthetase MADE_00503 535458 - 534739 - | ribulose-phosphate 3-epimerase TERM 526 534942 - 534924 - G 73 -8 -4.09864 | AGCCACTTTCTAAAA CGCGCTGC TTA ACTGCGCG CACTTTATCTAGGGT TERM 527 535454 - 535440 - G 73 -4.3 -4.81249 | CTTTAAATCTAAAAA CAACA GGGTT TGTTG CCATTTACGTTTTAG MADE_00504 535723 - 536544 + | hypothetical protein TERM 528 536580 - 536547 - f 72 -9.9 -3.04144 | gap 1, opp_overlap 536557, overlap 536557 CTTCCAGCTGTAAGA CTTGTTCAAAGGCTAT TAG ATAGCCTTT-AACAAA ACGTTGAGTAGTAAA TERM 529 536571 - 536557 - f 72 -8.6 -3.55548 | opp_overlap 536557, overlap 536547 TAAGACTTGTTCAAA GGCTAT TAG ATAGCC TTTAACAAAACGTTG TERM 530 536557 - 536571 + F 72 -8.6 -3.53761 | opp_overlap 536557 536547 TAAGACTTGTTCAAA GGCTAT TAG ATAGCC TTTAACAAAACGTTG TERM 531 536592 - 536623 + F 72 -8.9 -3.33744 | opp_overlap 536597, overlap 536597 CAAAACGTTGAGTAG TAAAAGCCTAATG TCAGTT CATTAGGCTTTTC ATTTTTAAAGGCAAC TERM 532 536618 - 536597 - f 82 -8.8 -4.30576 | opp_overlap 536592 536597 CGTTGAGTAGTAAAA GCCTAATG TCAGTT CATTAGGC TTTTCATTTTTAAAG TERM 533 536597 - 536618 + F 88 -8.8 -4.77757 | opp_overlap 536597, overlap 536592 CGTTGAGTAGTAAAA GCCTAATG TCAGTT CATTAGGC TTTTCATTTTTAAAG MADE_00505 536715 - 537023 + | hypothetical protein MADE_00506 537032 - 537232 + | hypothetical protein TERM 534 537335 - 537347 + T 79 -3.3 -5.4505 | GCCTTCAATCCGAAG GCCGT TGC ACTGC TTTTTTCTTACGAGC MADE_00507 538205 - 537324 - | DNA adenine methylase MADE_00508 539943 - 538432 - | DamX-related protein TERM 535 540052 - 540042 - R 81 -5.4 -5.00884 | opp_overlap 540042 ATTGGGTGCAAAAAA TGAC CAT GTCA TCGCTTCTGGGGGCA MADE_00509 541167 - 540115 - | 3-dehydroquinate synthase TERM 536 541129 - 541104 - G 93 -8.9 -4.7497 | opp_overlap 541104, overlap 541071 541072 TGTAGGCACTAAAAA GGCCAGGTTGC GAAA GCAGCCCAGCC TCTATCTGTATAGGA MADE_00510 541729 - 541214 - | shikimate kinase TERM 537 541983 - 541951 - R 89 -9.4 -4.14615 | gap 1, opp_overlap 541959 541960, overlap 541959 AAAAAGGCCCTAAAA CGAAAAAACGCGCTT TAAA AAGCGCATTTTTT-G TTTATCAAACCAACA TERM 538 541976 - 541959 - R 93 -7.7 -5.46698 | opp_overlap 541959 541960, overlap 541951 CCTAAAACGAAAAAA CGCGCTT TAAA AAGCGCA TTTTTTGTTTATCAA TERM 539 541959 - 541976 + r 100 -5.5 -5.72622 | opp_overlap 541951 541959, overlap 541960 CCTAAAACGAAAAAA CGCGCTT TAAA AAGCGCA TTTTTTGTTTATCAA TERM 540 541960 - 541975 + r 83 -9 -4.01946 | opp_overlap 541959 541951, overlap 541959 CTAAAACGAAAAAAC GCGCTT TAAA AAGCGC ATTTTTTGTTTATCA MADE_00511 543643 - 542000 - | putative type IV pilus biogenesis protein PilQ (cytoplasmic ATPase) TERM 541 542320 - 542344 + g 75 -2.8 -5.1925 | CAGGGGTGATGTGCG GCGTTACTTT AAGCG ACAGTACCGC TTTTTTGAATTCTAC MADE_00512 544266 - 543775 - | putative Type IV pilus biogenesis protein PilP MADE_00513 544910 - 544299 - | type IV pilus biogenesis protein PilO TERM 542 544360 - 544390 + g 75 -9.9 -3.58343 | gap 1 GTCTTCGCCTGAAGT TTAAGCGATAGGCC GTTT GGC-TGTCGCTTAA TTTCGAAATCATGAA TERM 543 544633 - 544645 + g 75 -6.3 -4.44301 | opp_overlap 544630 544633, overlap 544630 544630 CTTTTAAGCATAGAA GAGAA ATC TTCTC TTATTTGTTTTAGCT MADE_00514 545491 - 544910 - | type IV pilus biogenesis protein PilN MADE_00515 546546 - 545479 - | putative Type IV pilus biogenesis protein PilM TERM 544 546911 - 546893 - g 79 -8.9 -4.08767 | opp_overlap 546892 CGGATCCCGGTAAAA CTTGAGG AAGTA CCTCAAG AATTAATTGACGCCA TERM 545 547243 - 547253 + G 77 -6.8 -4.41348 | GTATTACGGAAAGCC GCTC AAC GAGC TTTCTTTGGCGCAAA MADE_00516 546683 - 549346 + | bifunctional murein transglycosylase/transpeptidase TERM 546 549515 - 549499 - g 70 -9.5 -3.05715 | AACCCCCCTACTTAA TAAAGGC AGT GCCTTTA ACGCTCGCGAGCGGG TERM 547 550493 - 550480 - g 78 -6.7 -4.64676 | CGACTTTCAACAAAA GCTTC AGCA GAAGC AAGCCGATTTAGCTG MADE_00517 549425 - 551116 + | NAD-linked malate dehydrogenase TERM 548 551139 - 551153 + F 100 -11.4 -5.64274 | opp_overlap 551139 CGCAAGTTTTAAAAA GCAGGC TGA GCCTGC TTTTTTTGTACCTGC TERM 549 551153 - 551139 - f 93 -11.4 -4.62471 | opp_overlap 551139 CGCAAGTTTTAAAAA GCAGGC TGA GCCTGC TTTTTTTGTACCTGC TERM 550 551294 - 551273 - f 71 -5.1 -4.56775 | opp_overlap 551275, overlap 551275 AGCGCTTTGTAAAAA GGTGTTGCA GATG CGCAACATC TCATGGCCAAAACCT MADE_00518 551500 - 551691 + | hypothetical protein TERM 551 551842 - 551815 - f 78 -2.6 -5.47218 | opp_overlap 551815 TTTTATTCAAAAAAA CCGCACGTTGTA TTAA TGCAATGTGTGG TTTTTTTATGTCAGT TERM 552 551815 - 551842 + F 100 -9.2 -5.72616 | opp_overlap 551815 TTTTATTCAAAAAAA CCGCACGTTGTA TTAA TGCAATGTGTGG TTTTTTTATGTCAGT TERM 553 552068 - 552048 - g 72 -6.1 -4.19678 | overlap 552062 552063 GGAGACGGCAATAAA TGGGCGA GCATCAA CCGCCCA GTGTCTGGAGCAACG TERM 554 552167 - 552177 + G 71 -6.8 -4.18018 | GAAAGTTACTATTAT GCTC GAA GAGC TTTTAGCTGCCGGCG MADE_00519 551982 - 552839 + | putative Glutathione S-transferase TERM 555 552849 - 552885 + T 73 -6.6 -4.21676 | gap 1, opp_overlap 552852, overlap 552854 GCTTAAGCACCATAA GTAGTTGGGGGCAGGGT CGTT ACTCTGACCCC-ATTGC TTTTAAATGAGTTCT TERM 556 552854 - 552881 + T 89 -12 -3.69605 | opp_overlap 552852, overlap 552849 AGCACCATAAGTAGT TGGGGGCAGGGT CGTT ACTCTGACCCCA TTGCTTTTAAATGAG MADE_00520 553415 - 552888 - | hypothetical protein TERM 557 553156 - 553146 - G 79 -3.2 -5.36018 | overlap 553150 ATCAAAAAAAACAAA GCCA CGA TAGC TACCGCTTTGTGTAA MADE_00521 553439 - 553573 + | hypothetical protein MADE_00522 553791 - 555266 + | catalase MADE_00523 555921 - 555319 - | transcriptional regulator, TetR family protein TERM 558 555864 - 555854 - G 73 -4.6 -4.85782 | CCCTTTAAAAACAAA GCCG AAG CAGC CTCTAAAATTTTTTG MADE_00524 557067 - 556201 - | alpha/beta hydrolase-like protein TERM 559 556423 - 556460 + g 73 -10.7 -2.96405 | overlap 556422 556420 TGAAGGCATTTGAAT GGTGTCGTAGTGGTGTT GGTT AACATCACTACCAAACC CTGTTTTTACGTAGC MADE_00525 559162 - 557201 - | sensory box/GGDEF family protein TERM 560 558530 - 558545 + g 76 -4 -4.93898 | gap 1 CGCAGATAAATCGTG GCAG-TG GAT CAGCTGC TTTTTGTGATGCTCT TERM 561 558773 - 558755 - G 100 -8.8 -5.44119 | opp_overlap 558758 558762, overlap 558758 GTCATCGCAAAAAAA TGACGGCG TTC CGCCGTTA TTAAAAATTTCTTGA TERM 562 558758 - 558770 + g 83 -10.5 -3.67173 | opp_overlap 558755 558758, overlap 558762 ATCGCAAAAAAATGA CGGCG TTC CGCCG TTATTAAAAATTTCT TERM 563 558770 - 558758 - G 79 -10.5 -3.50569 | opp_overlap 558758 558762, overlap 558755 ATCGCAAAAAAATGA CGGCG TTC CGCCG TTATTAAAAATTTCT MADE_00526 559438 - 559190 - | diguanylate cyclase/phosphodiesterase MADE_00527 560938 - 559628 - | amino-acid N-acetyltransferase TERM 564 560853 - 560823 - G 73 -10.4 -3.09272 | overlap 560820 560849 ATATTCGGAAAATTA GGGTGTTCGATGGC TTC GCCACCGAACATCA AGACAAAGGTTTTTC MADE_00528 562336 - 560954 - | argininosuccinate lyase MADE_00529 563606 - 562401 - | argininosuccinate synthase MADE_00530 564555 - 563644 - | Ornithine carbamoyltransferase (OTCase) TERM 565 564566 - 564576 + r 75 -8.2 -4.07568 | overlap 564568 564569 TTCATTATATTTCTC CGGC ATT GCCG TTTTCAGCGGCAAGG MADE_00531 565358 - 564555 - | acetylglutamate kinase MADE_00532 566368 - 565355 - | N-acetyl-gamma-glutamyl-phosphate reductase TERM 566 565607 - 565621 + g 80 -10 -3.84719 | TTTCTCAAGTTGTGC GCTGGT GGT ACCAGC TTTAACTTTCACGGT TERM 567 567132 - 567116 - g 70 -5 -4.41548 | overlap 567118 TTACACGCTATAAAA GCGGCC CGCTT GGCGGC GACCAACAAATTGGG MADE_00533 566947 - 567357 + | methylglyoxal synthase TERM 568 567422 - 567440 + T 79 -6.7 -4.62783 | gap 1, opp_overlap 567422 567423, overlap 567422 567423 GTTGAATATAAAAAA G-GCTGGC CTAG GCCAGCAC TTTTTAGGGTGGGTA TERM 569 567439 - 567422 - T 93 -6.9 -5.47159 | opp_overlap 567422 567422 567423, overlap 567423 GTTGAATATAAAAAA GGCTGGC CTAG GCCAGCA CTTTTTAGGGTGGGT TERM 570 567438 - 567423 - T 84 -10.4 -3.87211 | opp_overlap 567422 567422 567423, overlap 567422 TTGAATATAAAAAAG GCTGGC CTAG GCCAGC ACTTTTTAGGGTGGG TERM 571 567423 - 567438 + T 72 -10.4 -2.61831 | opp_overlap 567423 567422, overlap 567422 567422 TTGAATATAAAAAAG GCTGGC CTAG GCCAGC ACTTTTTAGGGTGGG MADE_00534 568302 - 567475 - | hypothetical protein MADE_00535 568512 - 569255 + | Transcriptional regulatory protein CpxR TERM 572 569274 - 569264 - g 74 -6.8 -4.20696 | CCATTAATGGTAAAA CTGC TAC GCAG CGTAAGCCCAACGCG TERM 573 569283 - 569308 + G 70 -2.5 -5.09245 | gap 1, overlap 569287 569288 TACGCAGCGTAAGCC CAACGCGGGCCA TCA TGGGCCGA-TTG TTTTTATGGTTTTGG TERM 574 569417 - 569405 - g 70 -4.8 -4.42653 | ATTGTACCGATAAAA CCAC GTGAA GTGG CTGCTCTCAATCAAG TERM 575 569675 - 569699 + G 76 -4.1 -5.08824 | overlap 569657 569677 GGGCCGGTTTTCTTC GAGCGAGACGG CTC CCGATTTGCGC TTTTTTCAGTGAGAC MADE_00536 569255 - 570616 + | putative sensor histidine kinase protein TERM 576 570909 - 570919 + G 83 -4.6 -5.31855 | opp_overlap 570909, overlap 570903 CGATCTCTATCAAAA TGGC TTT GCCG TTTTTATTCTTGATC MADE_00537 570679 - 571647 + | lysophospholipase L2 MADE_00538 571778 - 572242 + | putative tRNA/rRNA methyltransferase TERM 577 572287 - 572302 + F 87 -6.1 -5.24531 | opp_overlap 572287 572286 572299 ATTCATTTTAAAAAC GCCCT GTTATA AGGGC TTTTTTATGCCCAAT MADE_00539 572414 - 572815 + | NAD(P)H-dependent glycerol-3-phosphate dehydrogenase TERM 578 572867 - 572843 - T 100 -10.1 -5.39681 | opp_overlap 572843 572844, overlap 572844 ATAACTAAATAAAAA TGAAGCGTAAT GTG ATTACGCTTCG TTTTTTAAATCTCGA TERM 579 572843 - 572867 + T 100 -12.3 -5.1287 | opp_overlap 572843 572844, overlap 572844 ATAACTAAATAAAAA TGAAGCGTAAT GTG ATTACGCTTCG TTTTTTAAATCTCGA TERM 580 572844 - 572866 + T 95 -13.6 -3.66999 | opp_overlap 572843 572844, overlap 572843 TAACTAAATAAAAAT GAAGCGTAAT GTG ATTACGCTTC GTTTTTTAAATCTCG TERM 581 572866 - 572844 - T 100 -13.6 -3.81369 | opp_overlap 572844 572843, overlap 572843 TAACTAAATAAAAAT GAAGCGTAAT GTG ATTACGCTTC GTTTTTTAAATCTCG MADE_00540 573880 - 572858 - | NAD(P)H-dependent glycerol-3-phosphate dehydrogenase TERM 582 573838 - 573807 - G 73 -4.2 -4.74103 | overlap 573811 CTGGCAAGGCAAAAA GCAAGGGCGGTGCC ATAA GACCCCGCCCCCAA TACTGAAACCGACGC TERM 583 573834 - 573811 - G 95 -11.6 -3.84648 | overlap 573807 CAAGGCAAAAAGCAA GGGCGGTGCC ATAA GACCCCGCCC CCAATACTGAAACCG MADE_00541 574409 - 573900 - | export protein SecB MADE_00542 574732 - 574472 - | glutaredoxin 3 GrxC MADE_00543 575170 - 574745 - | rhodanese domain protein TERM 584 574900 - 574916 + g 78 -5.9 -4.83169 | overlap 574901 GTTTGTCTTTACTGT TTTCAAG TTT CTTGAAG TTTTTCTCGCGCACT TERM 585 576507 - 576525 + G 73 -7.4 -4.08317 | GTTGGGCGAAGTGGC GGTCAGGA ATA TCCTAACC TTTACTTTGAAATTC MADE_00544 575421 - 576584 + | peptidase, M23/M37 family protein TERM 586 576715 - 576704 - f 80 -4.4 -5.2853 | opp_overlap 576704 GAGTTAAAAATAAAA CACA GCTA TGTG TATTGTGCGCTAAAT MADE_00545 576940 - 577701 + | hypothetical protein TERM 587 577999 - 578014 + G 76 -7.6 -4.2361 | TTTTTTGCGCAAGTG TGGTTC GAAA GAACCA TTTTAACCTTCTCTT MADE_00546 577951 - 578286 + | MerC-like membrane protein MADE_00547 579015 - 578326 - | glycerophosphoryl diester phosphodiesterase family protein MADE_00548 579922 - 579047 - | membrane protein MADE_00549 580903 - 579926 - | Phosphatidylserine decarboxylase MADE_00550 582113 - 581070 - | ribosome-associated GTPase MADE_00551 582200 - 582745 + | oligoribonuclease TERM 588 582889 - 582873 - f 76 -10.9 -2.62616 | TCAGTTGGTAGAGCA CGACCTT GCC AAGGTCG GGGTCGCGAGTTCGA TERM 589 583126 - 583110 - f 76 -10.9 -2.62616 | TCAGTTGGTAGAGCA CGACCTT GCC AAGGTCG GGGTCGCGAGTTCGA MADE_00552 583385 - 584179 + | hypothetical protein MADE_00553 584657 - 587743 + | TonB-dependent receptor TERM 590 587781 - 587764 - f 76 -7 -4.41956 | opp_overlap 587764 ACACAGATATCAAAA GCAGCT TTTTTT AGCTGC TTTTTTTATATCTCT TERM 591 587764 - 587781 + F 100 -7 -5.77988 | opp_overlap 587764 ACACAGATATCAAAA GCAGCT TTTTTT AGCTGC TTTTTTTATATCTCT MADE_00554 587927 - 588388 + | Thioesterase (4HBT) superfamily enzyme TERM 592 588409 - 588424 + F 100 -8.2 -5.76633 | GTCGCGTTATTTGAA GGTCGC TTTT GCGGCC TTTTTTTATGTCTGC TERM 593 588876 - 588857 - g 74 -3.5 -5.06816 | ACTTCTCAAGAAAAA GCGTGGT TAAAAT ACCAAGC GCGAATTAATAGACC MADE_00555 588605 - 588997 + | hypothetical protein MADE_00556 589271 - 590989 + | acetolactate synthase III large subunit TERM 594 591031 - 591021 - g 79 -8.2 -4.30416 | overlap 591022 AGTATTAATGGAAAA CGCC CCA GGCG CACTATCACGTATCG MADE_00557 590989 - 591486 + | acetolactate synthase III, small subunit TERM 595 591535 - 591519 - T 93 -10.9 -4.66264 | opp_overlap 591519 TAAAATGTTGAAAAA GCTGTCA ATC TGACAGC TTTTTTTGTTATCGC TERM 596 591519 - 591535 + T 100 -10.9 -5.88565 | opp_overlap 591519 TAAAATGTTGAAAAA GCTGTCA ATC TGACAGC TTTTTTTGTTATCGC MADE_00558 592624 - 591638 - | hypothetical protein TERM 597 592359 - 592324 - G 78 -12 -2.94416 | gap 1 GATCCGTATCAGATA GCATTCCGCTT-CTCGG CTC CCAAGCAAGCTGAATGC GGCCCTCTGCTCTGG MADE_00559 592776 - 592913 + | hypothetical protein MADE_00560 592883 - 593122 + | twin argininte translocase protein A MADE_00561 593122 - 593421 + | sec-independent translocase TERM 598 593984 - 594014 + G 71 -3.8 -4.79955 | ATGCTAAATCATTAC GCGCCAAGCGCCCC TAT GTGGTTGTTGGTGC TTTTGTTGTGGGTAT MADE_00562 593422 - 594177 + | Sec-independent periplasmic protein translocation protein TatC MADE_00563 594203 - 594739 + | hypothetical protein TERM 599 595470 - 595491 + G 79 -10.3 -3.51545 | AGACTGATAAATTGC GTATTAGCA GTTA TGCTAATAC TTGTGAGTTGTTTTC MADE_00564 594740 - 595516 + | Mg-dependent DNase MADE_00565 595540 - 597426 + | Signaling protein with a acyltransferase and GGDEF domains MADE_00566 597453 - 598433 + | delta-aminolevulinic acid dehydratase TERM 600 598501 - 598475 - T 100 -13.8 -5.1764 | opp_overlap 598480, overlap 598476 GACAGAAGACAAAAA GTAAAGGCGTGC TTA GCACGCCTTTAT TGCAATTACCTTGAT TERM 601 598500 - 598476 - T 100 -17.3 -3.68957 | opp_overlap 598480, overlap 598475 ACAGAAGACAAAAAG TAAAGGCGTGC TTA GCACGCCTTTA TTGCAATTACCTTGA TERM 602 598480 - 598496 + T 100 -13.7 -4.20918 | opp_overlap 598476 598475 AAGACAAAAAGTAAA GGCGTGC TTA GCACGCC TTTATTGCAATTACC MADE_00567 600033 - 598522 - | guanosine pentaphosphatase MADE_00568 601359 - 600070 - | ATP-dependent RNA helicase TERM 603 601293 - 601280 - G 72 -5.3 -4.6902 | overlap 601283 601284 GTACAATGTGAAAAA TTAGC TGCC GCTAA CGCGTCAACAACCTT MADE_00569 601448 - 601786 + | thioredoxin TERM 604 601805 - 601825 + F 86 -7.5 -5.06414 | opp_overlap 601805 ATAGCAAATTGAAAG CCGGTGC TAATTAT GCGCCGG TTTTTATTAACGCCA MADE_00570 602058 - 603323 + | transcription termination factor Rho TERM 605 603364 - 603349 - f 95 -11.8 -4.27259 | opp_overlap 603349 GATATACATTGAAAA GGCGCC TGTT GGCGCC TTTTTCGTTTCTTCT TERM 606 603349 - 603364 + F 100 -11.8 -5.10877 | opp_overlap 603349 GATATACATTGAAAA GGCGCC TGTT GGCGCC TTTTTCGTTTCTTCT MADE_00571 603550 - 604848 + | Peptidase M20D, amidohydrolase TERM 607 605530 - 605543 + G 72 -6.7 -4.2408 | GCAGCGTGTTGATGT GTTGG AGTT CCAAC TTTCTAATTTTATCC TERM 608 606305 - 606291 - g 74 -5.6 -4.56775 | opp_overlap 606292 606294 ATGTGGTGGCAAAAA TGGTGG GCG CCCCCA TTCGTCGGCTTATTC TERM 609 607568 - 607550 - g 74 -3.9 -4.91473 | gap 1, opp_overlap 607551, overlap 607552 GAAGGGAAAAATAAA GATGCGAT TATC ATCGCA-C TTACTGCCAACGTGT TERM 610 607567 - 607552 - g 73 -7.6 -4.05491 | opp_overlap 607551, overlap 607550 AGGGAAAAATAAAGA TGCGAT TATC ATCGCA CTTACTGCCAACGTG TERM 611 607619 - 607600 - g 100 -12.2 -5.1523 | overlap 607592 TGCAGAAGACAAAAA TGCCTGCT TAGC AGCAGGCA TGAATGCACATTTAA TERM 612 607639 - 607656 + G 70 -4.9 -4.48902 | gap 1, opp_overlap 607639 TGCACATTTAAGTAA GCCT-CTT AGT AAGCAGGC TTTATTTGACTGTAT MADE_00572 604937 - 607696 + | putative signal transduction histidine kinase two-component system with Protein-glutamate methylesterase domain MADE_00573 608932 - 607658 - | Na+/H+ antiporter, NhaA MADE_00574 609211 - 609705 + | phosphoribosylaminoimidazole carboxylase catalytic subunit MADE_00575 609702 - 610838 + | phosphoribosylaminoimidazole carboxylase TERM 613 610868 - 610888 + F 93 -11.1 -4.8048 | overlap 610869 TCGCTAGAATACGCA TCCGCTGCT CAA GGCAGCGGG TTTTTAGTGTGCCGA TERM 614 610869 - 610887 + F 90 -12.4 -3.47806 | overlap 610868 CGCTAGAATACGCAT CCGCTGCT CAA GGCAGCGG GTTTTTAGTGTGCCG MADE_00576 611040 - 611582 + | hypothetical protein MADE_00577 611769 - 612242 + | putative DNA-binding stress protein TERM 615 612349 - 612329 - f 90 -11.1 -4.31164 | opp_overlap 612329 TGGATATAACACAAA GGGTACAGC AGC GCTGTGCCC TTTTTTGTATACTAG TERM 616 612329 - 612349 + F 100 -13.3 -5.39721 | opp_overlap 612329 TGGATATAACACAAA GGGTACAGC AGC GCTGTGCCC TTTTTTGTATACTAG MADE_00578 612424 - 613593 + | Glucose dehydrogenase, putative TERM 617 613634 - 613611 - T 100 -15.4 -3.55866 | opp_overlap 613615, overlap 613615 TTATACCGAAACCAA TAAAGGCGCC CTTA GGCGCCTTTA AATGGTGAATGCACT TERM 618 613630 - 613615 - T 95 -11.8 -4.40298 | opp_overlap 613615, overlap 613611 ACCGAAACCAATAAA GGCGCC CTTA GGCGCC TTTAAATGGTGAATG TERM 619 613615 - 613630 + T 89 -11.8 -3.68827 | opp_overlap 613615 613611 ACCGAAACCAATAAA GGCGCC CTTA GGCGCC TTTAAATGGTGAATG MADE_00579 615762 - 613648 - | putative peptidase TERM 620 614704 - 614716 + g 70 -9.1 -3.34398 | opp_overlap 614704 614703, overlap 614702 AAGGTATGAAAACAT CAGCC CTC GGCTG TCTTTACGCCACACA TERM 621 615457 - 615473 + g 73 -2.1 -5.23644 | GTCTAAAGCGATAAA CGGGCGG TGT TCACCTG TTTTTATGTTTACTT MADE_00580 616285 - 615953 - | predicted membrane protein TERM 622 616664 - 616644 - g 78 -6.1 -4.58395 | overlap 616660 CCTATTTTGGAAAAA CTGGCCG GTGAATA CAGCCAG CATCTAATATTGGCG MADE_00581 616482 - 617351 + | Thioredoxin domain-containing protein MADE_00582 617832 - 617407 - | hypothetical protein MADE_00583 618096 - 619286 + | hypothetical protein MADE_00584 619320 - 619502 + | hypothetical protein MADE_00585 619809 - 621107 + | adenylosuccinate synthetase MADE_00586 621206 - 621084 - | hypothetical protein TERM 623 621133 - 621150 + g 100 -11.3 -5.3671 | opp_overlap 621133 GTAATACCTTTAAAA GCCCAGT GTTC ACTGGGC TTTTTTGATTCTCTT TERM 624 621150 - 621133 - G 89 -11.3 -4.14472 | opp_overlap 621133 GTAATACCTTTAAAA GCCCAGT GTTC ACTGGGC TTTTTTGATTCTCTT MADE_00587 621438 - 622844 + | NAD-dependent aldehyde dehydrogenase MADE_00588 622856 - 623284 + | predicted dioxygenase of extradiol dioxygenase family protein TERM 625 623690 - 623661 - g 100 -10.8 -5.27335 | opp_overlap 623668 GCGCTTAAAGAAAAA GGGAAAACCGTA ACTGTG TACGGTGTTCCC GCATTAACGGCTGAA MADE_00589 623292 - 623762 + | hypothetical protein TERM 626 623792 - 623814 + T 81 -12.1 -2.87132 | opp_overlap 623792 623797, overlap 623797 ACGTGTTAGCTAAGA GAAAAGGCG GTTAG CGCCTTTTC TGTGTAAAGCCAGAC TERM 627 623814 - 623792 - T 82 -12.1 -3.08798 | opp_overlap 623792 623797, overlap 623797 ACGTGTTAGCTAAGA GAAAAGGCG GTTAG CGCCTTTTC TGTGTAAAGCCAGAC TERM 628 623797 - 623809 + T 77 -6.2 -4.60797 | opp_overlap 623792 623797, overlap 623792 TTAGCTAAGAGAAAA GGCG GTTAG CGCC TTTTCTGTGTAAAGC TERM 629 623809 - 623797 - T 80 -6.2 -4.68724 | opp_overlap 623797 623792, overlap 623792 TTAGCTAAGAGAAAA GGCG GTTAG CGCC TTTTCTGTGTAAAGC MADE_00590 625563 - 623833 - | gamma-glutamyltranspeptidase MADE_00591 626928 - 625582 - | Na+/H+ antiporter family protein TERM 630 626575 - 626565 - G 74 -5.4 -4.7254 | AGCCTCTAGCAAAAA TACC TGC GGTA AGCACGCTGAGGTTC MADE_00592 627158 - 629179 + | Beta-hexosaminidase A precursor TERM 631 630126 - 630140 + G 72 -5.7 -4.40561 | opp_overlap 630116 630126, overlap 630123 CTAAACAAGAGGAAA CGTCT CCTGA AGACG TTATTTTTGACAAAG MADE_00593 629261 - 630331 + | MscS Mechanosensitive ion channel MADE_00594 631840 - 630491 - | putative lipoprotein MADE_00595 633034 - 632039 - | glucokinase regulatory-like protein TERM 632 634088 - 634075 - g 73 -2.3 -5.27023 | overlap 634057 ATTGTAAAAACAAAA CCCCA GTGA TGGTG CGTGGAAAACGGGCT MADE_00596 633225 - 634301 + | alanine racemase TERM 633 634631 - 634605 - T 100 -18 -5.53079 | opp_overlap 634605 AAAAGATACAAAAAA GCCCGGTGGGTG TGT CACTCACCGGGC TTTTTATTTGCGTTA TERM 634 634605 - 634631 + T 100 -20.2 -5.33026 | opp_overlap 634605 AAAAGATACAAAAAA GCCCGGTGGGTG TGT CACTCACCGGGC TTTTTATTTGCGTTA MADE_00597 635403 - 634699 - | hypothetical protein MADE_00598 635945 - 635625 - | hypothetical protein MADE_00599 636438 - 636052 - | Glyoxalase/bleomycin resistance protein/dioxygenase MADE_00600 636742 - 637860 + | hypothetical protein MADE_00601 637881 - 638678 + | probable ABC transporter, periplasmic substrate-binding protein TERM 635 639089 - 639077 - g 72 -5.5 -4.51743 | TTAGCACTAAACAAA CCCTA CAG CAGGG CTATCTAGTCATGGG MADE_00602 638848 - 640116 + | putative manganese transporter MADE_00603 640301 - 640708 + | hypothetical protein MADE_00604 641118 - 640789 - | PhnA protein MADE_00605 641598 - 641143 - | acetyltransferase, GNAT family protein MADE_00606 642017 - 641595 - | Histone acetyltransferase HPA2/related acetyltransferase MADE_00607 642237 - 642100 - | hypothetical protein MADE_00608 642281 - 642703 + | hypothetical protein TERM 636 642896 - 642878 - g 70 -2.4 -4.9792 | TACTGGAGACAAAAA GAAAGGTT TAG AACTTCTC GATAAGCTTGATTCA MADE_00609 642759 - 642926 + | hypothetical protein MADE_00610 643518 - 643255 - | hypothetical protein MADE_00611 643817 - 643680 - | Plasmid maintenance system antidote protein TERM 637 644155 - 644177 + H 80 -10.6 -3.35465 | GAATAGCTGCTAACT GCATGCGAAG TTT TTTCGCGTGC TTAGTCTGTATGCCT TERM 638 644481 - 644501 + G 73 -10.5 -3.06183 | overlap 644485 GTTGCGAGCAGTGCA TATGGCGAC CCT GTCGCTATA TTGAATAGGAATGAA MADE_00612 644424 - 644648 + | hypothetical protein MADE_00613 644638 - 644931 + | putative relE protein MADE_00614 645339 - 645043 - | Plasmid stabilization system MADE_00615 645561 - 645343 - | hypothetical protein TERM 639 645704 - 645653 - R 79 -9.3 -3.94 | opp_overlap 645665 CTAACTTTTAAATAA GGGGCGCAGGCGCGTGGGCTA TAATGCGAAG CAGCCCACGTGTATGCGACCC AGCGAACGAAGTGAG TERM 640 645766 - 645754 - R 73 -7.7 -3.87994 | opp_overlap 645756, overlap 645756 AGGTACGTTTATAAA CATCG GAG CGATG CCCGACTTTTATCAC MADE_00616 646163 - 645987 - | glucose-6-phosphate isomerase MADE_00617 646431 - 646261 - | hypothetical protein MADE_00618 646539 - 647528 + | ISGsu4, transposase MADE_00619 648223 - 647963 - | hypothetical protein MADE_00620 648446 - 648228 - | predicted transcriptional regulator MADE_00621 648668 - 648555 - | hypothetical protein TERM 641 648673 - 648694 + r 70 -8.1 -3.71284 | gap 1, overlap 648670 TTGTTATACATGTGA CGAG-AAAGC CTT GCTTTACTCG TTATCTTCATCGGAG MADE_00622 648939 - 648688 - | hypothetical protein TERM 642 648753 - 648769 + g 72 -2.9 -4.91511 | overlap 648746 648754 648756 GTGCACCAGACATTG TGTCTTC TAT GAAGTCG TTTTTATGGTCAGGT MADE_00623 649070 - 649312 + | predicted transcriptional regulator MADE_00624 650242 - 649979 - | hypothetical protein MADE_00625 651006 - 650527 - | hypothetical protein TERM 643 650940 - 650955 + g 84 -7.6 -4.8236 | ACGGGTCATTATCAT TTACGG AATC CCGTAA TTCTTTTTTTACGTC MADE_00626 651833 - 651120 - | hypothetical protein MADE_00627 652089 - 651838 - | hypothetical protein MADE_00628 652463 - 653179 + | ISGsu4, transposase MADE_00629 653588 - 653202 - | PilT protein domain protein MADE_00630 653818 - 653588 - | Prevent-host-death protein TERM 644 654121 - 654152 + r 73 -7.2 -4.07124 | overlap 654122 654125 AAATTGTGGGGATAC CTCAGGGGCAGTGT TGAT ACTCTGCCCCTCAA TTTCTATGGCTCCTA TERM 645 654122 - 654151 + r 78 -10.7 -3.03792 | overlap 654121 654125 AATTGTGGGGATACC TCAGGGGCAGTGT TGAT ACTCTGCCCCTCA ATTTCTATGGCTCCT TERM 646 654125 - 654148 + r 83 -12.4 -2.73797 | overlap 654122 654121 TGTGGGGATACCTCA GGGGCAGTGT TGAT ACTCTGCCCC TCAATTTCTATGGCT MADE_00631 655082 - 654192 - | regulatory protein, LysR:LysR, substrate-binding MADE_00632 655286 - 657004 + | toxin secretion ABC transporter ATP-binding protein TERM 647 657081 - 657098 + G 86 -4.9 -5.58074 | opp_overlap 657071 CAAAGCTACACCGGG TAGTCAC TGGC GTGATTA TTTTTTTAGTGCTTG MADE_00633 657005 - 658057 + | membrane fusion protein MADE_00634 658051 - 659481 + | outer membrane component of multidrug efflux pump TERM 648 659613 - 659640 + T 90 -10.6 -4.15698 | opp_overlap 659614, overlap 659614 AGCCGAAAAAGAAAA ACGGCGTATTGA ACTA TCAGTACGCCGC TTGTTTATATGGATA TERM 649 659639 - 659614 - T 100 -11.9 -5.61881 | opp_overlap 659613 659614 GCCGAAAAAGAAAAA CGGCGTATTGA ACTA TCAGTACGCCG CTTGTTTATATGGAT TERM 650 659614 - 659639 + T 95 -14.1 -3.08696 | opp_overlap 659614, overlap 659613 GCCGAAAAAGAAAAA CGGCGTATTGA ACTA TCAGTACGCCG CTTGTTTATATGGAT MADE_00635 660482 - 659670 - | hypothetical protein MADE_00636 660848 - 660720 - | hypothetical protein MADE_00637 661181 - 660900 - | hypothetical protein MADE_00638 661713 - 661249 - | CheC-like protein TERM 651 661369 - 661410 + g 72 -6.4 -4.27316 | opp_overlap 661367 661368, overlap 661409 CGACACGACAATAGG CGTGGCCATGCCGAACTC ATAACC GCGTTCAGCAAGGTCCCG TTTTGCGTTACCGCA MADE_00639 662676 - 662212 - | stationary-phase regulator of sigma D, the major sigma subunit of RNA polymerase TERM 652 663093 - 663110 + G 75 -6.3 -4.42235 | gap 1, overlap 663089 663096 AGCCTGGCTGGGAGC GCGTGTCG TTG CGACA-GC TTCTTTTTGCAGATT MADE_00640 662840 - 663673 + | NUDIX family pyrophosphohydrolase containing a Zn-finger TERM 653 663678 - 663693 + F 80 -10.4 -3.70076 | opp_overlap 663678 CAGACAAATAAAAAA CCCTGC CGAG GCAGGG TTTCAATACGTTTAG TERM 654 663693 - 663678 - f 100 -10.4 -5.76237 | opp_overlap 663678 CAGACAAATAAAAAA CCCTGC CGAG GCAGGG TTTCAATACGTTTAG TERM 655 663773 - 663759 - f 71 -7.2 -3.80573 | TCTATTATTAGCAAA CACTTA CTT TAAGTG CAAGCGTCTTTTTCA MADE_00641 663902 - 665044 + | uroporphyrinogen decarboxylase TERM 656 665504 - 665521 + G 72 -2.7 -4.93365 | gap 1, overlap 665505 GTCGGTGAGTACGAT G-GTTCTG AAA CGGAACTC TTTTTAGTTATCAAA MADE_00642 665069 - 665713 + | hypothetical protein MADE_00643 666899 - 665757 - | putative 4Fe-4S binding protein TERM 657 665827 - 665837 + g 100 -3.2 -6.22691 | CGGTTTTGTGCTTCA TAGG CCG CCTG TTTTTTTTGTTGTTG TERM 658 666420 - 666440 + g 74 -5.4 -4.58395 | CGTAAGACTATGTTT GCCGGT CCACCCTAT ACCGGC TTTTTCAGCGATAGC MADE_00644 666906 - 668405 + | carbohydrate kinase, YjeF related protein MADE_00645 668480 - 668962 + | ATP/GTP hydrolase MADE_00646 668947 - 670380 + | N-acetylmuramoyl-l-alanine amidase II, murein hydrolase TERM 659 670401 - 670413 + F 74 -6.2 -4.41047 | overlap 670401 CGCGGGCGTGGTTGA GGGG AAAGC CCCC TTTTGCTTACGCAAT TERM 660 670735 - 670745 + G 73 -4 -4.81359 | opp_overlap 670735 TACGACGCTAGATGA TTTG GAG CAAA TTTTATCTTTGGGTT TERM 661 670987 - 670977 - g 72 -3.2 -5.08824 | TGCGCACTGAAAAAA CCGA ATT TCAG CACATCGAAGAGGTA TERM 662 671511 - 671527 + G 83 -9.5 -4.05033 | opp_overlap 671510 671509 671506 GTATGGATAATAAGC GTCACTT AGA AAGTGAC TTTATGTCCCATGAA MADE_00647 670481 - 672307 + | DNA mismatch repair protein MADE_00648 672339 - 673244 + | tRNA delta(2)-isopentenylpyrophosphate transferase MADE_00649 673323 - 673571 + | RNA-binding protein Hfq MADE_00650 673589 - 674878 + | GTP-binding protein HflX MADE_00651 674946 - 676097 + | HflK complex with HflC TERM 663 676484 - 676469 - g 83 -4 -5.30616 | CTACTTAAACAAAAA GTAAAC AACG GTCTAC GTTCAGAGTTCGGTA MADE_00652 676103 - 676984 + | Membrane protease, stomatin/prohibitin family protein TERM 664 677035 - 677006 - f 84 -12.3 -3.05384 | opp_overlap 677011, overlap 677011 GCCGGTTTGATGTAA CAAAAGCCAGTCT TTTT AGACTGGCTTTTT TGTGCGCTAAAGAAA TERM 665 677030 - 677011 - f 100 -12.2 -4.67982 | opp_overlap 677011, overlap 677006 TTTGATGTAACAAAA GCCAGTCT TTTT AGACTGGC TTTTTTGTGCGCTAA TERM 666 677011 - 677030 + F 100 -12.2 -5.26316 | opp_overlap 677011 677006 TTTGATGTAACAAAA GCCAGTCT TTTT AGACTGGC TTTTTTGTGCGCTAA TERM 667 678404 - 678422 + G 74 -3.8 -5.08824 | TACTCTGGTATTTTT CGCAGC CCAGTTT GTTGCG TTTTTTAAGTGGACG MADE_00653 677304 - 678881 + | putative p-aminobenzoyl-glutamate transport protein (AbgT family) TERM 668 678961 - 678995 + F 100 -15.9 -4.81083 | overlap 678994 CGCGACTTATCTGAA GCGGTAGCTGTTC TTTAAAACT GAACAGCTACCGC TTTTTAATGGTTAAA MADE_00654 679114 - 680193 + | Protoheme ferro-lyase MADE_00655 680287 - 680694 + | hypothetical protein MADE_00656 680928 - 682568 + | thiamine pyrophosphate enzyme-like TPP-binding TERM 669 682760 - 682736 - g 80 -9.9 -3.94409 | GACACTATTGATAAA GCGATTGCTGC TGC GCAGCAGGCGC AACCTGCCATGGCCG TERM 670 683037 - 683024 - g 77 -3.7 -5.1861 | opp_overlap 683024 GGTATGACGAAAAAA GTGCC TATC GGCCC ATGTTCGTTTATATC MADE_00657 682601 - 684028 + | Aldehyde dehydrogenase TERM 671 684119 - 684094 - T 72 -8.9 -3.36251 | opp_overlap 684109, overlap 684092 684095 684108 ATCATTAAATGAAGA GTGGCGCGCTA AATC TGGCGCGCCAT ACGCGGCATCCTTAT TERM 672 684118 - 684095 - T 83 -12.4 -2.61027 | opp_overlap 684109, overlap 684094 684092 684108 TCATTAAATGAAGAG TGGCGCGCTA AATC TGGCGCGCCA TACGCGGCATCCTTA MADE_00658 684496 - 684131 - | hypothetical protein MADE_00659 684635 - 685387 + | 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4- benzoquinol methylase TERM 673 685447 - 685464 + F 75 -5.6 -4.82855 | opp_overlap 685445 GTATAGAAAGTCATA GCTAGA AACGAA TCTAGC TTTTTGAATTTGCTA TERM 674 685515 - 685499 - f 74 -5.1 -4.7629 | TTATTAACCGAAAAA GGACAAG CGG CTTACCC AGCTATCCTCACCGA TERM 675 685589 - 685606 + F 73 -9.9 -3.16039 | opp_overlap 685589 ACATAATAATAACAA TGGTCTG ACCA CAGACCA TTCCTAAACATAATT TERM 676 685606 - 685589 - f 89 -9.9 -4.14147 | opp_overlap 685589 ACATAATAATAACAA TGGTCTG ACCA CAGACCA TTCCTAAACATAATT MADE_00660 685636 - 686610 + | putative lactonizing lipase TERM 677 687563 - 687551 - g 70 -4.9 -4.37711 | CTATCAAAGCCAAAA GTTTA GTG TAAAC GAGATAAAACGCTTG MADE_00661 686610 - 687599 + | lipase chaperone MADE_00662 687778 - 688338 + | Glutathione S-transferase MADE_00663 688338 - 688997 + | Glutathione S-transferase MADE_00664 689967 - 689050 - | homocysteine S-methyltransferase family protein MADE_00665 691173 - 690001 - | transcriptional regulator, ROK family protein TERM 678 691328 - 691350 + H 78 -7.2 -4.32678 | opp_overlap 691327 TTCTTGCGCAAAATG TTAAATCAAT TGG GTTGATTTAA TTGTTTCTTTCGACA TERM 679 691402 - 691430 + H 73 -2.3 -5.28315 | overlap 691399 ACGATTCGTTAACCT TGTGCTTTTCGCG CAA CGTTAAATGCCCA TTTTTTGAATTTTGT MADE_00666 691459 - 692427 + | Sugar kinase, ribokinase family protein TERM 680 692479 - 692458 - T 90 -7.3 -5.18726 | opp_overlap 692469, overlap 692460 GTTGCACAATAAAAA GAGGGTTCA AATT TGAACCCTT CAGATTGATGGTAAA TERM 681 692477 - 692460 - T 89 -9.9 -4.22377 | opp_overlap 692469, overlap 692458 TGCACAATAAAAAGA GGGTTCA AATT TGAACCC TTCAGATTGATGGTA TERM 682 692491 - 692518 + T 100 -10.7 -5.31275 | opp_overlap 692495 CCTTCAGATTGATGG TAAACCCCTCT TTTTTC GGAGGGGTTTA TTTTTTCTAGTAACA MADE_00667 693191 - 692616 - | elongation factor P MADE_00668 695019 - 693289 - | DNA ligase TERM 683 694666 - 694678 + g 79 -7.7 -4.45544 | TAGATAATGGGCCAA GGTGT CAG ACACC TTTTGCTTACTCACC MADE_00669 696035 - 695019 - | exonuclease of the beta-lactamase fold involved in RNA processing-like protein TERM 684 695227 - 695242 + g 72 -9 -3.64703 | TCGGCATTTTTTTGT TTCGCG CGAG CGCGAA TTTGCATCCAACCAG TERM 685 697086 - 697099 + G 73 -2.4 -5.1356 | overlap 697085 AGCTATTGAAAATGC CCAA ACCACA TTGG TTTTTGTTAATACCC TERM 686 697232 - 697255 + G 79 -10.2 -3.60525 | opp_overlap 697225 697220 AAACCGAAGCCATGA TGGCCAGCGG CATG CTGCGGGCCA TTGTATGTACCTCGG TERM 687 697985 - 697964 - g 76 -5.1 -4.77986 | opp_overlap 697979, overlap 697966 CCAAAGAGCCAAAAA TACCCAGCT ACGC AGGTGGGCA GATGCCTTTGTCTAC MADE_00670 696196 - 698802 + | ATP-dependent RNA helicase, DEAD/DEAH box family protein TERM 688 699519 - 699503 - g 85 -7.3 -5.06451 | TACCACCCCAAAAAA CGAACAA CCA TTGCTCG CCGTCGTTATTCAGG TERM 689 699616 - 699653 + G 83 -6.3 -5.04325 | opp_overlap 699616 AGACATCGACGAAGA CGTCATGCTAACGCT ATTGCCCA AGCGTTTGCGTCACG TTTTTATGCTTTACG MADE_00671 698987 - 699691 + | metallophosphoesterase MADE_00672 700743 - 699850 - | glycosyl hydrolase, family 10 MADE_00673 701794 - 700730 - | Porphyromonas-type peptidyl-arginine deiminase MADE_00674 702517 - 701933 - | short chain dehydrogenase MADE_00675 702803 - 703486 + | GTP cyclohydrolase I TERM 690 703516 - 703531 + T 100 -10.4 -6.02919 | opp_overlap 703516 TAACATTAAAAAAAA CCGCTG GATT CAGCGG TTTTTTTATTTCTAA TERM 691 703531 - 703516 - T 100 -10.4 -5.94597 | opp_overlap 703516 TAACATTAAAAAAAA CCGCTG GATT CAGCGG TTTTTTTATTTCTAA TERM 692 704154 - 704117 - T 86 -12.2 -3.36492 | opp_overlap 704116 TCTGCAATGGGATAA CTCAGTCAATTACTGG ATAATG CCAGCAATCAACTGAG CGTATTATTAAGAAT MADE_00676 706120 - 704171 - | alpha-amylase, amylosucrase TERM 693 704245 - 704272 + g 79 -10 -3.76373 | overlap 704248 TATCAACGGTCTCGT CAGTTAGCAAGT CTTT ACTTGCTGATTG TTTAAGTGTTGCCAA TERM 694 704248 - 704269 + g 74 -8.1 -4.011 | overlap 704245 CAACGGTCTCGTCAG TTAGCAAGT CTTT ACTTGCTGA TTGTTTAAGTGTTGC TERM 695 705033 - 705021 - G 77 -9.1 -3.91798 | GAATTTGTAAGCAAA CGCGT TTT ACGCG TTGCCAGCGAGTTCC TERM 696 707605 - 707586 - g 72 -4.9 -4.64598 | CAACTATGTTAAAAA CCCGACG AAAGAG CGTCTGG CTGAGATTGAAGCAA MADE_00677 706420 - 707637 + | transporter, putative TERM 697 707689 - 707715 + F 70 -8.8 -3.34488 | gap 1, overlap 707689 707692 TCAGCCCTACATTCA CACGTGCCGGT CTTGCT ACCGGCAC-TG GTTTTTCCCCACGTT TERM 698 707689 - 707716 + F 79 -6.9 -4.58283 | overlap 707689 707692 TCAGCCCTACATTCA CACGTGCCGGT CTTGCT ACCGGCACTGG TTTTTCCCCACGTTG TERM 699 707692 - 707713 + F 82 -11.6 -3.23708 | overlap 707689 707689 GCCCTACATTCACAC GTGCCGGT CTTGCT ACCGGCAC TGGTTTTTCCCCACG MADE_00678 707779 - 708594 + | mechanosensitive ion channel family protein TERM 700 708609 - 708621 + T 70 -9.1 -3.14136 | GTTTCGTATTAACCG CGCGT TAA ACGCG TTCAATCATTAATAA TERM 701 708634 - 708673 + T 70 -8.9 -3.14026 | gap 1, opp_overlap 708634, overlap 708639 GCGTTCAATCATTAA TAAAGTGCCGAATGAACA GTTGA TGTTT-TTCGGCATTTTA TTACCTCTACCTGTA TERM 702 708639 - 708668 + T 81 -6.6 -4.70169 | gap 1, opp_overlap 708634, overlap 708634 CAATCATTAATAAAG TGCCGAATGAACA GTTGA TGTTT-TTCGGCA TTTTATTACCTCTAC MADE_00679 709077 - 708694 - | glyoxylase I family protein MADE_00680 710014 - 709109 - | oxidoreductase, aldo/keto reductase family protein MADE_00681 710313 - 710855 + | lipoprotein Blc TERM 703 711039 - 711058 + G 82 -11.4 -3.4811 | overlap 711032 711038 ACGGTCCCTGCGACT GCGCGTTG TTTT CAGCGCGC TATTGTTATGCCAAA TERM 704 711926 - 711944 + G 78 -5.2 -5.00616 | AGTAACCTTAGCTGA TGGCACCG ATA TGGTTCCA TTTTTTGCGGGGCAA MADE_00682 710952 - 711998 + | dihydroorotase MADE_00683 712119 - 713498 + | ATP-dependent RNA helicase DbpA MADE_00684 713534 - 713932 + | hypothetical protein TERM 705 714029 - 714083 + T 77 -6.5 -4.54047 | gap 1, opp_overlap 714042, overlap 714031 714042 ACTTTATTATCGTTA CCCAACAAAAAAAGCCCCA-GTTTGG TGAA CCAAACGTGGGGCTTTAGCTATTGTG TTTTATGTGCGCTAC TERM 706 714031 - 714081 + T 73 -7.7 -3.88029 | gap 1, opp_overlap 714042, overlap 714029 714042 TTTATTATCGTTACC CAACAAAAAAAGCCCCA-GTTTGG TGAA CCAAACGTGGGGCTTTAGCTATTG TGTTTTATGTGCGCT TERM 707 714070 - 714042 - T 100 -14 -5.8187 | gap 1, opp_overlap 714031 714029 714042 TACCCAACAAAAAAA GCCCCA-GTTTGG TGAA CCAAACGTGGGGC TTTAGCTATTGTGTT TERM 708 714042 - 714070 + T 100 -14 -3.80745 | gap 1, opp_overlap 714042, overlap 714031 714029 TACCCAACAAAAAAA GCCCCA-GTTTGG TGAA CCAAACGTGGGGC TTTAGCTATTGTGTT MADE_00685 716179 - 714113 - | metalloendopeptidase PepO TERM 709 714926 - 714908 - G 72 -9 -3.60475 | AATTTTTACGGTAAA CTTAGATA GCT TATCTAAG GCTTGGGCACGGGTT MADE_00686 716421 - 716215 - | hypothetical protein MADE_00687 716443 - 717066 + | Dimethylmenaquinone methyltransferase MADE_00688 717324 - 719165 + | multidrug resistance ABC transporter ATP-binding and permease protein MADE_00689 719529 - 719867 + | Preprotein translocase subunit SecE MADE_00690 719872 - 720423 + | transcription termination/antitermination factor NusG TERM 710 720472 - 720450 - f 100 -14.2 -3.57615 | opp_overlap 720450 CTAAGAGTTTCGAAA GAGCCCCTAC TAC ATAGGGGCTC TTTTATTTGCAGAAC TERM 711 720450 - 720472 + F 100 -13.5 -4.86731 | opp_overlap 720450 CTAAGAGTTTCGAAA GAGCCCCTA CTACA TAGGGGCTC TTTTATTTGCAGAAC TERM 712 720927 - 720894 - g 89 -8.9 -4.58773 | opp_overlap 720896, overlap 720896 CGCACTAAAGGAAAA CAGGCTTAGCATAGC ACAA GCCATGTTAAGCCTT GATAAAGGTGATAAA TERM 713 720925 - 720896 - g 87 -11.5 -3.90002 | opp_overlap 720896, overlap 720894 CACTAAAGGAAAACA GGCTTAGCATAGC ACAA GCCATGTTAAGCC TTGATAAAGGTGATA TERM 714 720896 - 720925 + G 77 -11.5 -3.15861 | opp_overlap 720894 720896 CACTAAAGGAAAACA GGCTTAGCATAGC ACAA GCCATGTTAAGCC TTGATAAAGGTGATA MADE_00691 720844 - 720957 + | hypothetical protein TERM 715 721097 - 721084 - g 75 -6.7 -4.45771 | ACGCGAAAACAGAAA GCCTT GAGA AAGGC GCTCCAGTACCAGTA MADE_00692 720942 - 721388 + | ribosomal protein L11 TERM 716 721832 - 721800 - g 78 -5.5 -4.74103 | TGCCTAACCCAAAAA CTGGCACTGTAACGC CTG ACGTTGCAACGGCAG TTAAGAACGCTAAAG MADE_00693 721376 - 722224 + | ribosomal protein L1 MADE_00694 722282 - 722659 + | ribosomal protein L7/L12 TERM 717 722680 - 722653 - f 72 -9.4 -3.05644 | gap 1, opp_overlap 722657 722660, overlap 722652 722656 722657 722660 722678 TGCAGAAGTAGAAAT CAAGTAATCTGAC GTA GTCAGATTA-TTG CCTGAGACGGCAAGG TERM 718 722678 - 722656 - f 70 -7.8 -3.66017 | opp_overlap 722657 722660, overlap 722653 722652 722657 722660 AGAAGTAGAAATCAA GTAATCTGAC GTA GTCAGATTAT TGCCTGAGACGGCAA TERM 719 722657 - 722677 + F 81 -11.3 -3.05384 | opp_overlap 722656 722653 722652 722657 722660, overlap 722660 GAAGTAGAAATCAAG TAATCTGAC GTA GTCAGATTA TTGCCTGAGACGGCA TERM 720 722677 - 722657 - f 80 -11.3 -2.78526 | opp_overlap 722657 722660, overlap 722656 722653 722652 722660 GAAGTAGAAATCAAG TAATCTGAC GTA GTCAGATTA TTGCCTGAGACGGCA TERM 721 722674 - 722660 - f 72 -8.6 -3.52317 | opp_overlap 722657 722660, overlap 722657 722656 722653 722652 GTAGAAATCAAGTAA TCTGAC GTA GTCAGA TTATTGCCTGAGACG TERM 722 722660 - 722674 + F 73 -8.6 -3.67597 | opp_overlap 722660 722657 722656 722653 722652, overlap 722657 GTAGAAATCAAGTAA TCTGAC GTA GTCAGA TTATTGCCTGAGACG TERM 723 722694 - 722720 + F 100 -17.4 -4.65838 | TGCCTGAGACGGCAA GGCTGGTGGTTT TTT GAACCACCAGCC TTTTTGCGCTGTATA TERM 724 725278 - 725251 - f 70 -7.8 -3.77206 | opp_overlap 725256 TACAACCTGACTAAA TACACGCGTTCT AACC AGAACACTTGTA TCAATCAGAAGCCTA TERM 725 727044 - 727061 + F 100 -14.1 -3.30243 | opp_overlap 727041 AATGTTATGAGATGG CCCGGCG CTTG CGCCGGG TTCTAGAGACTGACT TERM 726 728717 - 728698 - g 72 -2.9 -5.00765 | gap 1, overlap 728701 AATGAAGCAGAAAAA GCA-TACC GTACA GGTAATGC GGAGCTTCACTCACG TERM 727 730680 - 730666 - g 80 -7.1 -4.72486 | GAGAAAGTGGAAAAA GGCGA AGTTA TCGCC GACGGTCCAGAGTCT MADE_00697 727093 - 731265 + | RNA polymerase, beta prime subunit TERM 728 731299 - 731276 - f 91 -14 -2.78906 | overlap 731273 731266 731278 AATAAGGCAAGATCA TAGGAGTACG TTAA CGTACTCCTA ACAAATTGGCATGTC TERM 729 731297 - 731278 - f 82 -12.2 -2.93236 | overlap 731276 731273 731266 TAAGGCAAGATCATA GGAGTACG TTAA CGTACTCC TAACAAATTGGCATG TERM 730 731391 - 731440 + F 72 -4.4 -4.8048 | gap 3 ATGATCTTTAATATT CCGCGACCCGATTTTGGATAGCCAT CAA ATGGCT--CGATAAACGG-TCGCGG TTTTTCGTATCAGCG TERM 731 731495 - 731514 + F 70 -9.4 -2.55351 | opp_overlap 731493 731495 731507, overlap 731494 TGTTCACAAAGAAGA GCGATTAA TAGA TTAATCGC ATTAATATGGACCCA TERM 732 731514 - 731495 - f 79 -9.4 -3.62695 | opp_overlap 731495 731494, overlap 731493 731507 TGTTCACAAAGAAGA GCGATTAA TAGA TTAATCGC ATTAATATGGACCCA TERM 733 731526 - 731544 + F 78 -7.4 -4.45077 | TCGCATTAATATGGA CCCAGTCG CAG TGATTGGG TTTTCGTAGTTTTTA TERM 734 731642 - 731630 - g 80 -5.5 -5.00884 | overlap 731634 731635 AGCCCGTTGAAAAAA GCAAC GTA GCTGC TCTACAAGCTTGTCC MADE_00698 731575 - 731949 + | 30S ribosomal protein S12 MADE_00699 732025 - 732495 + | 30S ribosomal subunit protein S7 TERM 735 733826 - 733814 - g 86 -4.7 -5.5112 | overlap 733815 CTGACCAAGAAAAAA TGGGC ATT GCCCT AGGTAAACTTGCAGC TERM 736 733825 - 733815 - g 74 -8.2 -3.89587 | overlap 733814 TGACCAAGAAAAAAT GGGC ATT GCCC TAGGTAAACTTGCAG MADE_00700 732523 - 734088 + | elongation factor EF-2 MADE_00701 734184 - 734588 + | Translation elongation factor EF-Tu TERM 737 734611 - 734640 + T 90 -12.3 -3.53012 | opp_overlap 734618, overlap 734618 TTAGCAACATAAGCC AAAAAAAGCGCAC TTAG GTGCGCTTTTTTG TTTGCCCAGCGAAGC TERM 738 734633 - 734618 - T 100 -10.4 -5.55698 | opp_overlap 734618 734611 CATAAGCCAAAAAAA GCGCAC TTAG GTGCGC TTTTTTGTTTGCCCA TERM 739 734618 - 734633 + T 100 -10.4 -5.63517 | opp_overlap 734618, overlap 734611 CATAAGCCAAAAAAA GCGCAC TTAG GTGCGC TTTTTTGTTTGCCCA MADE_00702 734782 - 734624 - | hypothetical protein TERM 740 734702 - 734682 - G 70 -4.7 -4.42806 | overlap 734691 TCAGGTTGAAAGAAA CCTGAATCA CCC TGACTGAGG GGAAGATAATCCGAA TERM 741 736026 - 736010 - g 70 -10.1 -3.10112 | opp_overlap 736025, overlap 736013 ACTCAAGTTATGGAA GAAGGCG AGC CGCCTCC ATCGCTGGCTAAGAC TERM 742 736023 - 736013 - g 72 -8.2 -3.69283 | overlap 736010 CAAGTTATGGAAGAA GGCG AGC CGCC TCCATCGCTGGCTAA MADE_00703 735375 - 736208 + | probable reverse transcriptase/maturase family protein TERM 743 737585 - 737600 + G 71 -3.9 -4.77157 | GAGCTTTACAAAAAC GGCGC GGTTAA GCGTC TTTTTGGTGCATTCG TERM 744 737688 - 737673 - g 72 -4.8 -4.63486 | opp_overlap 737673 ACCGGGCTAAGAAAA TTCAAA GCAT TTTGAA TAATATCAATGATGC TERM 745 739014 - 739029 + G 71 -3.3 -4.7629 | overlap 739012 CTATGCTTGAACTGG CGAAA TTCGGC TTTCG TTTTTCAATTGATGA MADE_00704 736793 - 739351 + | sensory box/GGDEF/EAL domain protein MADE_00705 739549 - 740877 + | hypothetical protein TERM 746 740900 - 740928 + F 100 -14.7 -3.49924 | opp_overlap 740895 TCTCTAGAAGGTGTA GGAGCAGCGTT ATAAATA AACGCTGCTCC TTATAGTACTTTACA TERM 747 741381 - 741337 - f 82 -10.9 -3.46534 | opp_overlap 741351 741365, overlap 741335 741350 CAACCGTATTAAATA GCATAGAATATAACTAGGGGG GAA CGCCCTATTTGTATTCTATAC AGCTAGTTCAATACT TERM 748 741351 - 741367 + F 71 -6.5 -4.31164 | opp_overlap 741350 741337 741335, overlap 741365 AGCATAGAATATAAC TAGGGGG GAA CGCCCTA TTTGTATTCTATACA MADE_00706 741428 - 741565 + | hypothetical protein MADE_00707 741707 - 742711 + | methyl-accepting chemotaxis sensory transducer MADE_00708 742770 - 743822 + | putative NADPH-dependent aldose reductase TERM 749 743845 - 743871 + F 86 -7.3 -5.00895 | gap 1, opp_overlap 743845 ATAGCCCATTAGAAC TGGCGGGAG-GC ATGC GTACTCCCGTCA TTTTTGTGTAATACG MADE_00709 743930 - 745084 + | nptA protein TERM 750 745128 - 745098 - T 82 -12.1 -3.06302 | gap 1, opp_overlap 745107 745117, overlap 745101 745107 AGTACGTCGAGGGAA TGATGAAAACGGCG CAGG CGCCGTTTTCAT-A GGGTCTATTGAAAGG TERM 751 745126 - 745101 - T 100 -16.3 -2.75183 | opp_overlap 745107 745117, overlap 745098 745107 ACGTCGAGGGAATGA TGAAAACGGCG CAGG CGCCGTTTTCA TAGGGTCTATTGAAA TERM 752 745120 - 745107 - T 90 -9.5 -4.35742 | opp_overlap 745107 745117, overlap 745101 745098 AGGGAATGATGAAAA CGGCG CAGG CGCCG TTTTCATAGGGTCTA TERM 753 745107 - 745120 + T 89 -9.5 -4.27617 | opp_overlap 745107 745101 745098, overlap 745117 AGGGAATGATGAAAA CGGCG CAGG CGCCG TTTTCATAGGGTCTA MADE_00710 746312 - 745149 - | hypothetical protein TERM 754 745931 - 745917 - G 71 -10 -3.17194 | overlap 745920 ATTCTTGTAAGTTAA GTACGC GTG GCGTAC TCGCGGAGTGTAGGA TERM 755 746277 - 746292 + g 86 -3.2 -5.80951 | opp_overlap 746275 746274, overlap 746275 746274 CGCTAGGCACAATGC TACCGC GGTA GCCGTA TTTTTTATTTTAGCT TERM 756 746765 - 746741 - g 79 -4.4 -5.13016 | gap 1, opp_overlap 746741 AACCAAAATTAAAAA CACG-CATTTT GGTG AAAACGACGTG TCTATCAAATGGTTT MADE_00711 746571 - 748517 + | acetyl-coenzyme A synthetase (Acetate--CoA ligase) (Acyl-activating enzyme) MADE_00712 748535 - 749179 + | putative regulator in two-component regulatory system ; LuxR family protein MADE_00713 750059 - 749139 - | ABC-type amino acid transport/signal transduction system,periplasmic component/domain MADE_00714 750613 - 750179 - | aspartyl protease MADE_00715 751662 - 750631 - | Succinylglutamate desuccinylase/aspartoacylase MADE_00716 752616 - 751711 - | ribosomal protein S6 modification protein TERM 757 751781 - 751800 + g 74 -3.4 -5.00642 | TCAATGATCATGCTG GCCACATC TTTC GTGGTGGC TTTTTCTATACCTTC TERM 758 752694 - 752708 + G 79 -4.2 -5.15167 | AATATCACACTCTGT CGATGC GAG GTGTCG TTTTTATTGATGGTG MADE_00717 752663 - 752776 + | hypothetical protein MADE_00718 753006 - 753629 + | hypothetical protein MADE_00719 757102 - 753659 - | Multidomain protein contains Na+/proline symporter PutP-like domain, sensory histidine kinase and receiver domain TERM 759 754451 - 754468 + g 79 -2.7 -5.30616 | opp_overlap 754451 754450 754460 GCAGGGACGCATAAT GGCTT TAAAGCCC AAGCC TTTTTCTTTGGCTCG TERM 760 757152 - 757184 + H 74 -6.3 -4.37711 | opp_overlap 757151, overlap 757155 TGCTATTATAACCAT TTCGACCATGGTC TACCTAC GACCATGGTCTCA TTTTGAATTTCATGA TERM 761 757155 - 757181 + H 85 -12.4 -3.16093 | opp_overlap 757151, overlap 757152 TATTATAACCATTTC GACCATGGTC TACCTAC GACCATGGTC TCATTTTGAATTTCA MADE_00720 757360 - 757626 + | hypothetical protein MADE_00721 757630 - 759336 + | Na+/solute symporter, Ssf family protein TERM 762 759374 - 759403 + F 100 -7.9 -6.07374 | opp_overlap 759357 759346 759369 759374 CTTTAGCAAATAAAA CCAATCTACTGGC GAAA GTGAGTAGGTTGG TTTTTTCTTTTTTGT TERM 763 759403 - 759374 - f 70 -3.5 -4.93877 | opp_overlap 759374, overlap 759357 759346 759369 CTTTAGCAAATAAAA CCAATCTACTGGC GAAA GTGAGTAGGTTGG TTTTTTCTTTTTTGT TERM 764 761218 - 761201 - g 72 -2.7 -4.96848 | gap 1, opp_overlap 761203, overlap 761203 761204 761206 TCGTCCATAGAAAAA CATCAGCT TAA AGCTG-CG TTTAAAGCCATAGAT MADE_00722 759440 - 761281 + | Signaling protein with a cAMP-binding, CBS domains and predicted nucleotidyltransferase domain MADE_00723 761287 - 761967 + | putative DNA polymerase, exonuclease activity MADE_00724 762958 - 761969 - | putative response regulator MADE_00725 763504 - 763085 - | hypothetical protein MADE_00726 763786 - 764943 + | TPR domain protein TERM 765 764979 - 764961 - T 100 -11.7 -5.78622 | CGAGGGCAAAAAAAA GCCGCAG ACTAG CTGCGGC AAAGAATAACACTAC TERM 766 765798 - 765818 + T 77 -8.3 -3.95725 | opp_overlap 765788 AACACCGAACCCGGT TTCGCGAAG TGA CTTCACGAA TTCTTCTTGAGCGTT TERM 767 766024 - 765983 - T 71 -6.6 -4.09108 | opp_overlap 765986 765988, overlap 765984 766016 CGTAATGTACATAAA CCTGACCAGTTAGTCTAG TATTTT CTTGACCAACTGGTCTAA TTTAATGAAATTTAA TERM 768 765986 - 766021 + T 75 -10.5 -2.97439 | opp_overlap 765984 765983 766016, overlap 765988 AATGTACATAAACCT GACCAGTTAGTCTAG TATTTT CTTGACCAACTGGTC TAATTTAATGAAATT MADE_00729 767247 - 766036 - | putative Na+ dependent nucleoside transporter TERM 769 766865 - 766875 + g 73 -4.6 -4.82901 | GACTCAGGACGACTT GTGC CTA GCGC TTTTTGTAGAAAGCC MADE_00730 767883 - 767260 - | uridine kinase MADE_00731 769025 - 768072 - | hypothetical protein MADE_00732 769831 - 769025 - | hypothetical protein TERM 770 770095 - 770118 + H 83 -6 -5.02074 | opp_overlap 770086 770094 770098, overlap 770098 TAATAACAAGTAAAT TAACTTGACC ATGT GGTCAGGTAA TTTTTTGCAAACTCA MADE_00733 770304 - 773477 + | putative Outer membrane protein with a TonB box TERM 771 773514 - 773542 + F 100 -9.7 -5.28176 | gap 1 AAGTTGTAGTGTTAG GTGCCACTCTCC TTAACT GGA-AGTGGCAC TTTTTTATGCCTGCG MADE_00734 773682 - 774353 + | DJ-1/PfpI family protein TERM 772 774380 - 774404 + T 100 -13 -4.25859 | opp_overlap 774384, overlap 774384 TTTGTAATGTAGTTG GAAACCGCAT CATGT ATGCGGTTTC TTGTTTTCGGTTGCC TERM 773 774384 - 774400 + T 84 -8 -4.68601 | opp_overlap 774384, overlap 774380 TAATGTAGTTGGAAA CCGCAT CATGT ATGCGG TTTCTTGTTTTCGGT MADE_00735 774902 - 774438 - | arginine repressor TERM 774 774721 - 774733 + g 74 -10.5 -3.28712 | opp_overlap 774718 TAAACCATATCACCG CGCGC GTT GCGCG TTCTCACAGCCCCAA MADE_00736 775142 - 776080 + | malate dehydrogenase TERM 775 776135 - 776175 + T 100 -16.3 -4.46267 | gap 1 CCGTGAATACTTCCC TGTAGGCTTCGCCACCGC TTCTCT GCGGTGGAG-AGCCTACA TTTTAATTACGTTCT MADE_00737 777080 - 776271 - | methionine sulfoxide reductase A MADE_00738 777278 - 777102 - | hypothetical protein MADE_00739 777304 - 777705 + | catalase-peroxidase KatB TERM 776 778002 - 777992 - g 74 -5.4 -4.59773 | opp_overlap 777992 GCCGACCGGGAAAAA TAGC TAC GCTA TTGTCGACAGAGCGT MADE_00740 777702 - 778193 + | catalase MADE_00741 778321 - 778190 - | hypothetical protein TERM 777 778258 - 778236 - G 100 -13.4 -5.1963 | opp_overlap 778236 CTTAAGTAACAAAAA GCCCGCTTCA TGA TGACGCGGGC TTTTTTCGTTTTATT TERM 778 778236 - 778258 + g 100 -13.4 -5.52347 | opp_overlap 778236 CTTAAGTAACAAAAA GCCCGCTTCA TGA TGACGCGGGC TTTTTTCGTTTTATT MADE_00742 780968 - 778347 - | phosphoenolpyruvate carboxylase MADE_00743 781201 - 781821 + | FKBP-type 22KD peptidyl-prolyl cis-trans isomerase (rotamase) TERM 779 781825 - 781864 + F 70 -8.6 -3.39439 | opp_overlap 781825, overlap 781823 781822 781826 781858 GTTCTAGGTTAATGA TTTCTTCACAGGAGTGCC CAAT GGTACTCCTGTGAATACC TGTATTCTTCTTTGT TERM 780 781826 - 781863 + F 81 -12.1 -2.62037 | opp_overlap 781825, overlap 781825 781823 781822 781858 TTCTAGGTTAATGAT TTCTTCACAGGAGTGCC CAAT GGTACTCCTGTGAATAC CTGTATTCTTCTTTG MADE_00744 782153 - 783331 + | Short-chain alcohol dehydrogenase family enzyme (paraquat) TERM 781 783393 - 783376 - f 79 -8.4 -4.08767 | opp_overlap 783376 GCTATCTGTGCAAAA GCCGTC TGATTT GACGGC TTTTTTGTGCTTTAT TERM 782 783376 - 783393 + F 95 -8.4 -5.43621 | opp_overlap 783376 GCTATCTGTGCAAAA GCCGTC TGATTT GACGGC TTTTTTGTGCTTTAT TERM 783 783752 - 783740 - f 82 -7.7 -4.58644 | opp_overlap 783738 783740 AATCAACAACGAAAA GGTGT TTA ACACC TGTTAATAGTGCGTT TERM 784 783864 - 783849 - g 76 -4 -4.96762 | overlap 783840 783853 TACATATGATAAAAA TCAAGA AAGG TCTCGA CCTCCCAATTGAGGG MADE_00745 783839 - 785179 + | Na(+)-translocating NADH-quinone reductase subunit A MADE_00746 785183 - 786373 + | Na(+)-translocating NADH-quinone reductase subunit B TERM 785 786532 - 786514 - g 76 -8.2 -4.03995 | overlap 786495 CTCTTGATAAAAAGA GCAACATT CTT AATGCTGC AGGCCTTTACGAAAT TERM 786 786937 - 786923 - g 73 -7.8 -4.19238 | overlap 786924 TGGTGAAGTGCAAAA CCCTGC TTG GCAGGA CAAATGGGACGGCAA TERM 787 787011 - 786998 - g 72 -5.3 -4.65895 | TCGCGTAGTGAAAAA TGCTA ACCC TAGCA ATCCTCACACTATCG MADE_00747 786375 - 787139 + | Na(+)-translocating NADH-quinone reductase subunit C TERM 788 787190 - 787176 - g 100 -8.5 -5.13137 | TAAAGAAATGAAAAA GGCCC TCTTT GGGCC AATCCTGGACAACAA MADE_00748 787150 - 787782 + | NADH-ubiquinone oxidoreductase MADE_00749 787786 - 788394 + | Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrE MADE_00750 788415 - 789647 + | Na(+)-translocating NADH-quinone reductase subunit F TERM 789 789698 - 789675 - f 77 -9.6 -3.55783 | opp_overlap 789680, overlap 789680 AAAAGTTAAGCATAA TAAAAGGGGC GCAA GCCCCTTTTT TGTTGAAGCAAAACG TERM 790 789693 - 789680 - f 93 -9.5 -4.84492 | opp_overlap 789680, overlap 789675 TTAAGCATAATAAAA GGGGC GCAA GCCCC TTTTTTGTTGAAGCA TERM 791 789680 - 789693 + F 100 -9.5 -5.4505 | opp_overlap 789680 789675 TTAAGCATAATAAAA GGGGC GCAA GCCCC TTTTTTGTTGAAGCA TERM 792 789774 - 789786 + G 74 -3.4 -4.98758 | AACATCGTGATTCGT TTCG CAATT CGAA TTTTTCTCGCTTTTT MADE_00751 789738 - 790790 + | thiamin biosynthesis lipoprotein ApbE MADE_00752 790800 - 791033 + | uncharacterized conserved membrane TERM 793 791064 - 791094 + F 100 -5.5 -5.86609 | gap 1, opp_overlap 791066, overlap 791066 TGGCTTAAAATCTAA AAGCGCTGTTAGAT GCTA ATC-GACAGCGCTA TTTTTGTTTTTTTAA TERM 794 791066 - 791092 + F 82 -8.1 -4.51984 | gap 1, opp_overlap 791066, overlap 791064 GCTTAAAATCTAAAA GCGCTGTTAGAT GCTA ATC-GACAGCGC TATTTTTGTTTTTTT TERM 795 791092 - 791066 - f 70 -5.9 -4.4267 | gap 1, opp_overlap 791066 791064 GCTTAAAATCTAAAA GCGCTGTTAGAT GCTA ATCGA-CAGCGC TATTTTTGTTTTTTT TERM 796 792108 - 792081 - g 83 -6.3 -5.01535 | GGATAATCACAAAAA GCGAACGGGTA AACCGG TACGCATTCGC ACGCAGGGCGTGAAG MADE_00753 791269 - 792318 + | DNA polymerase IV MADE_00754 792401 - 792649 + | hypothetical protein MADE_00755 792713 - 793603 + | Zn-dependent hydrolase, glyoxylase family protein MADE_00756 793874 - 793653 - | hypothetical protein TERM 797 793928 - 793968 + r 77 -8.4 -3.87869 | gap 1, opp_overlap 793927 793929 793931 793934, overlap 793929 793930 TACCACGAACTTAAT AGA-TTATGGGGGCAGAGT GATT ACTCTGACCCCATAGCTCG TTTATACCAAATTAG TERM 798 793967 - 793929 - R 73 -9.7 -3.16944 | gap 1, opp_overlap 793929 793928 793930, overlap 793927 793931 793934 ACCACGAACTTAATA GA-TTATGGGGGCAGAGT GATT ACTCTGACCCCATAGCTC GTTTATACCAAATTA TERM 799 793929 - 793967 + r 82 -11.9 -2.924 | gap 1, opp_overlap 793927 793929 793931 793934, overlap 793928 793930 ACCACGAACTTAATA GA-TTATGGGGGCAGAGT GATT ACTCTGACCCCATAGCTC GTTTATACCAAATTA TERM 800 793930 - 793965 + r 81 -11.2 -3.01125 | opp_overlap 793927 793929 793931 793934, overlap 793929 793928 CCACGAACTTAATAG ATTATGGGGGCAGAGT GATT ACTCTGACCCCATAGC TCGTTTATACCAAAT TERM 801 793964 - 793931 - R 85 -12.5 -3.14234 | opp_overlap 793930 793929 793928, overlap 793927 793929 793934 CACGAACTTAATAGA TTATGGGGGCAGAGT GATT ACTCTGACCCCATAG CTCGTTTATACCAAA TERM 802 793961 - 793934 - R 93 -14.2 -2.77036 | opp_overlap 793930 793929 793928, overlap 793931 793927 793929 GAACTTAATAGATTA TGGGGGCAGAGT GATT ACTCTGACCCCA TAGCTCGTTTATACC MADE_00757 794927 - 793980 - | sterol desaturase family protein, putative MADE_00758 794962 - 795633 + | putative transcriptional regulator (Crp family) protein MADE_00759 796311 - 795637 - | transcriptional regulator, TetR family protein TERM 803 796583 - 796570 - H 84 -6.7 -4.87786 | GCAACCTGACAAAAA GCTGT TTAA ACAGC TCAAAACGCATACAA TERM 804 797041 - 797060 + G 71 -10.8 -2.72558 | overlap 797024 797030 TAATCGCTATGAGTA CCTTGATG AATA CATCAAGG TGGTTAAAGAGTTGT MADE_00760 796613 - 797701 + | putative enzyme MADE_00761 797701 - 798435 + | isochorismatase family protein MADE_00762 798573 - 798956 + | endoribonuclease L-PSP family protein MADE_00763 799015 - 799851 + | hydrolase, alpha/beta fold family protein TERM 805 800107 - 800130 + G 73 -2.4 -5.10461 | gap 1 TAGGCTCGACATCGG CAAACTGCAGC CCG GC-GCGCTTTG TTTTTATTACGTCAG MADE_00764 799902 - 800558 + | Nitroreductase TERM 806 801010 - 800997 - g 78 -6.7 -4.72846 | opp_overlap 801006 TCACAGATGTAAAAA GTGTG GCCA CACAC GATGTGCTTTTCTGC MADE_00765 800582 - 801112 + | NAD(P)H-flavin oxidoreductase TERM 807 801396 - 801379 - g 79 -9.8 -3.68292 | ATGCTGAAGAGATAA CCGCGC TAATTG GCGCGG AGCACGGAAAAATAA TERM 808 801424 - 801412 - g 77 -6.9 -4.4521 | opp_overlap 801419, overlap 801413 AGCACGGAAAAATAA GCCAC GAT GCGGC AGGAGAACTGCAGCG TERM 809 801464 - 801479 + G 70 -9 -3.33696 | GAACGTAGAGTTTGC CTGTGG TGCA CCACAG TTGCTTAAAGGCGAG MADE_00766 801132 - 802622 + | methylmalonate-semialdehyde dehydrogenase TERM 810 803366 - 803356 - g 74 -8.2 -3.85817 | ATTGTTTGGCAGAAA CGCC ACG GGCG GGCTGGTAAATACCA TERM 811 804700 - 804712 + G 72 -6.3 -4.28548 | opp_overlap 804699 TTACTATGACTACAG CGATT ACC AATCG TTTTCGTGGGTAAAT MADE_00767 802913 - 805231 + | TonB-dependent receptor TERM 812 805271 - 805245 - f 70 -9.5 -2.53012 | opp_overlap 805243 805241, overlap 805244 AATTTGAGTAGTAAT GCGCTTTATTC CAATT GAATGAAGCGC CAAATTTAGCTCCAA TERM 813 806217 - 806231 + G 72 -2.8 -5.02476 | overlap 806225 TGGCGCTAAAGAAGG GCAG TTTTGGT CTGC TTTTTTCGCAGGTCT MADE_00768 805522 - 807021 + | cytosine/purines, uracil, thiamine, allantoin transporter TERM 814 807052 - 807097 + T 80 -11.3 -2.90194 | gap 1, opp_overlap 807067 ACATTTCTTTAAGGC CGTGGG-GTCAGAGTACTTTTC TAC GAAATGTACTCTGACCCCCAAA TATACTTCAAGGGGT MADE_00769 807846 - 807112 - | protein containing HTH domain MADE_00770 807977 - 808381 + | hypothetical protein MADE_00771 808389 - 809198 + | hypothetical protein MADE_00772 809209 - 809679 + | YiaAB two helix protein MADE_00773 809865 - 810698 + | glutamine amidotransferase class-II domain protein MADE_00774 811687 - 810695 - | transcriptional regulator, LysR family protein TERM 815 812150 - 812165 + G 78 -5.4 -4.79756 | GAAAATAACTTTGAA TACTGG AAAA CCGGTA TTTTTCACTTCTGTG MADE_00775 811862 - 812377 + | glyoxalase family protein TERM 816 812501 - 812468 - T 74 -4.5 -4.946 | gap 1, opp_overlap 812469, overlap 812469 ACTAAATACGAAAAA GGCGAGG-GCGCTTCT GAT ATAAGCGTACCTCGCT TTTTAATACGCACTC TERM 817 812469 - 812500 + T 93 -10.2 -4.7254 | gap 1, opp_overlap 812469 812468 CTAAATACGAAAAAG GCGAGG-GCGCTTCT GAT ATAAGCGTACCTCGC TTTTTAATACGCACT MADE_00776 813170 - 812529 - | probable metallo-beta-lactamase MADE_00777 814481 - 813174 - | putative cationic amino acid transport protein MADE_00778 816141 - 814501 - | predicted metal-dependent amidohydrolase with the TIM-barrel fold protein TERM 818 814723 - 814741 + g 76 -7.4 -4.21954 | opp_overlap 814723 AGCCTCGTGAGCATA CCAGCC TTTTACT GGCTGG TTGTTTCTGTCTTGA MADE_00779 817229 - 816213 - | Threonine dehydratase TERM 819 817156 - 817172 + g 73 -2.2 -5.15634 | GATGATTCCACTATA GGCGTG TGTTT TACGTC TTTTTTGATCCGCTC TERM 820 818748 - 818734 - g 71 -7.2 -4.17556 | GATATGCTCAAGAAA CGTTTT GTA AAAACG AGCCTAAATACGTTC TERM 821 819953 - 819943 - g 74 -6.8 -4.36914 | TGGCGCTGCATAAAA TCGC GCA GCGA ATGCAAAGTACCACG MADE_00780 817536 - 820388 + | PAS sensor diguanylate cyclase and phophodiesterase MADE_00781 820401 - 820775 + | hypothetical protein TERM 822 820878 - 820854 - T 100 -9.4 -5.19261 | gap 1, opp_overlap 820854 AAACCCATTAAAAAA GCGATGCGCTT TCAC AAG-GCATCGC TTTTTTATTGCTTCA TERM 823 820854 - 820878 + T 100 -9.4 -5.5604 | gap 1, opp_overlap 820854 AAACCCATTAAAAAA GCGATGCGCTT TCAC AAG-GCATCGC TTTTTTATTGCTTCA MADE_00782 823131 - 820906 - | Dipeptidyl peptidase IV TERM 824 821235 - 821215 - G 77 -11.1 -3.28712 | GTGGGTGTCGTACAA GCGCCAGTC GGT GACTGGTGC GCCTGACACACCGGC TERM 825 822365 - 822382 + g 89 -9.1 -4.68384 | ACCAATACGTTTGGC GTGCCCG CTTT CGGGTAC TTTTGTTCAATAAGT TERM 826 822560 - 822584 + g 79 -7.7 -4.47183 | overlap 822559 CCGAATTTTATATTG CCGCCACCTTC TTT GGTGATGGCGG TTTCTTTACCTGATG TERM 827 822824 - 822834 + g 73 -2.4 -5.1356 | GATAAACGCATACGT TCGC GGC GCGC TTTTTCTTCGTCAGA TERM 828 823046 - 823061 + g 72 -9 -3.63968 | opp_overlap 823045 823046 GGGGAGGAGAAAATG CGCTCA ATAG TGAGCG TTTCAGCGTTTAAAG MADE_00783 823313 - 823810 + | nucleoside-diphosphate-sugar epimerase TERM 829 824002 - 823976 - g 90 -14.4 -3.16564 | GCCTTATTCTAGGAA GCTGGGCTGAGC CTA ACTCTGCCCAGC GCATAGTAGATATAG MADE_00784 823897 - 824658 + | putative RNA methyltransferase TERM 830 824781 - 824797 + G 71 -3.6 -4.81685 | overlap 824782 CGGCTTTTGCGCTAG CTGCGC TAAGT GCGCAC TTTTTCATGCTTGAT MADE_00785 824672 - 825166 + | hypothetical protein TERM 831 825284 - 825298 + F 71 -7.2 -3.8709 | overlap 825269 GGGAAATGCGCTATC CCTTAT TCT ATAAGG TTTATACCAAAGTTT MADE_00786 825446 - 826018 + | hypothetical protein TERM 832 826059 - 826080 + F 73 -5.8 -4.63218 | GTAGTACTCTTAGTT GCGTCTCT TTTTCT AGGGGCGC TTTTGTTAGCGCCCA MADE_00787 826095 - 828218 + | cellulose synthase catalytic subunit MADE_00788 828218 - 830494 + | celB protein MADE_00789 830488 - 831588 + | endoglucanase Y TERM 833 833279 - 833291 + G 71 -7.7 -3.90744 | TCTTACCAGTACGAC GGTTG CGG CAACC TTGTTTAGAAAAGCG MADE_00790 831585 - 834032 + | cellulose synthase operon protein C MADE_00791 835499 - 834084 - | Rhs family protein TERM 834 835629 - 835654 + r 80 -10.5 -3.71792 | opp_overlap 835634, overlap 835634 TAAGGTCCTATACGA AAAAAGCCACC CGAA GGTGGCTTTTC TTAATTTTCGCTTGG TERM 835 835649 - 835634 - R 100 -10.4 -5.21709 | opp_overlap 835629 835634 TCCTATACGAAAAAA GCCACC CGAA GGTGGC TTTTCTTAATTTTCG TERM 836 835634 - 835649 + r 93 -10.4 -4.89562 | opp_overlap 835634, overlap 835629 TCCTATACGAAAAAA GCCACC CGAA GGTGGC TTTTCTTAATTTTCG TERM 837 835664 - 835681 + r 70 -7.7 -3.72009 | overlap 835678 CTTTTCTTAATTTTC GCTTGGT TAAG ACCGAGC TTTAGCTGCTCTTCT MADE_00792 835877 - 835683 - | TonB system transport protein ExbD2 TERM 838 835952 - 835973 + r 79 -5.9 -4.91977 | overlap 835955 CTTGATTGTCTTCTG GACGGTTTA CGTC TAAACCTTC TTTTATCTTTTACTA TERM 839 835955 - 835970 + r 77 -6.2 -4.52747 | overlap 835952 GATTGTCTTCTGGAC GGTTTA CGTC TAAACC TTCTTTTATCTTTTA MADE_00793 837215 - 836130 - | phage-related DNA polymerase TERM 840 836460 - 836473 + g 72 -5.9 -4.52349 | AACCACTTCATACTG CGGCC CTTG GGCTG TTTGTATTTCTTTGT MADE_00794 837967 - 837212 - | DNA-directed DNA polymerase I MADE_00795 838290 - 838078 - | hypothetical protein TERM 841 838263 - 838238 - G 82 -11.1 -3.65351 | TCAGTGTGATCGAAA TGGTCAGCAGC GTCC GCAGCCGACCA GCCCATATCTTCGAG MADE_00796 839068 - 838370 - | hypothetical protein MADE_00797 839700 - 839065 - | hypothetical protein MADE_00798 840941 - 839775 - | gp25 TERM 842 840131 - 840105 - G 91 -8.1 -4.9792 | overlap 840107 CACTTCAGATAAAAA TGCTGTAACCA TCTCC TGGTTACAGTA AATAGACCCAGAGGT TERM 843 840129 - 840107 - G 71 -10.7 -2.74094 | overlap 840105 CTTCAGATAAAAATG CTGTAACCA TCTCC TGGTTACAG TAAATAGACCCAGAG TERM 844 840381 - 840400 + g 71 -7.2 -4.06562 | opp_overlap 840389 TTGAGCATCGCGAGC TGCAGTAA GCTG TTGCTGCA TTTCTAATTCGCGTT TERM 845 840971 - 840994 + r 77 -9.7 -3.47361 | opp_overlap 840987, overlap 840969 TTTGTTCTGTTTCGA TTGGCGTAA GATTAA TTACGCCAA TATTTAATCGGTGTA MADE_00799 842018 - 841014 - | ATPase MADE_00800 842188 - 842015 - | hypothetical protein MADE_00801 842619 - 842398 - | hypothetical protein MADE_00802 842819 - 842619 - | hypothetical protein MADE_00803 843359 - 843129 - | hypothetical protein MADE_00804 843942 - 844115 + | hypothetical protein MADE_00805 844687 - 844520 - | hypothetical protein MADE_00806 845386 - 845219 - | hypothetical protein TERM 846 845270 - 845290 + g 80 -9.7 -3.8709 | GTTTTCTACGTTACC CTTGGCGCA GCA TGCGACAAG TTTATCAAGGACTTT MADE_00807 845740 - 845531 - | hypothetical protein TERM 847 846143 - 846132 - g 76 -2.2 -5.37345 | TCCAACGAGAAAAAA CGAT TAGT ACCG GCCGTTTCGATTGTG TERM 848 846174 - 846164 - g 74 -5.4 -4.59773 | TTCGATTGTGAAAAA CAAC ACC GTTG GCTACAAGGTAATTA MADE_00808 846011 - 846220 + | hypothetical protein MADE_00809 846547 - 846281 - | hypothetical protein TERM 849 846851 - 846867 + r 75 -9.5 -3.28416 | TTCTCACTATTTTGA CACTATG TAC CATAGTG TTCCTATCACTACTG MADE_00810 847655 - 847473 - | hypothetical protein TERM 850 848088 - 848074 - R 79 -8.6 -4.08216 | GTATCTCGCTGAAAA GACACT CTC AGTGTC GAACCTATATAGCCA MADE_00811 848484 - 848329 - | hypothetical protein MADE_00812 848850 - 848683 - | hypothetical protein MADE_00813 849146 - 848850 - | hypothetical protein TERM 851 849330 - 849353 + r 81 -6.6 -4.72272 | opp_overlap 849331 849332, overlap 849332 CCTTTGGGTGCGAAA AGGGGGTGGG CACA TCCACCCCTA TTTTTAGTAACACAA TERM 852 849352 - 849331 - R 73 -7.2 -4.07568 | opp_overlap 849330 849332, overlap 849332 CTTTGGGTGCGAAAA GGGGGTGG GCACAT CCACCCCT ATTTTTAGTAACACA TERM 853 849351 - 849332 - R 78 -10.7 -3.04398 | opp_overlap 849330 849332, overlap 849331 TTTGGGTGCGAAAAG GGGGTGG GCACAT CCACCCC TATTTTTAGTAACAC TERM 854 849332 - 849351 + r 90 -11.4 -3.98256 | opp_overlap 849332 849331, overlap 849330 TTTGGGTGCGAAAAG GGGGTGGG CACA TCCACCCC TATTTTTAGTAACAC MADE_00814 849590 - 849447 - | hypothetical protein TERM 855 849479 - 849496 + g 75 -2.7 -5.11112 | overlap 849481 GTAATGCGCCAGCAT GAGGTAT ATTC ATACCTA TTTTTATTAGAATTT MADE_00815 849965 - 850096 + | hypothetical protein MADE_00816 850849 - 850517 - | hypothetical protein MADE_00817 851116 - 850868 - | hypothetical protein MADE_00818 851553 - 851344 - | hypothetical protein TERM 856 851901 - 851921 + r 76 -3.2 -5.24531 | opp_overlap 851898, overlap 851904 AGTAAAAATTAATTT TACCCCTA AAAAA TTGGGGTG TTTTTTCTGGAAACT TERM 857 852671 - 852705 + r 80 -10.6 -3.37056 | opp_overlap 852673, overlap 852673 TTCTAGGTTCTAGGA TATTCGCCCAGCAAGC GTA GCGCGCCGGGCGAATG TTCTAGATCCGTCAT TERM 858 852673 - 852703 + r 79 -11 -3.254 | opp_overlap 852673, overlap 852671 CTAGGTTCTAGGATA TTCGCCCAGCAAGC GTA GCGCGCCGGGCGAA TGTTCTAGATCCGTC TERM 859 852703 - 852673 - R 95 -15.4 -2.78816 | opp_overlap 852673 852671 CTAGGTTCTAGGATA TTCGCCCAGCAAGC GTA GCGCGCCGGGCGAA TGTTCTAGATCCGTC TERM 860 852763 - 852732 - R 93 -11.6 -4.55093 | opp_overlap 852759 852762, overlap 852733 TCATACAACAACAAA TGCCCTGCAACCAC CGAA GTGATTACAGGGCG GGCGATGGCTATACC TERM 861 852762 - 852733 - R 100 -15.1 -3.31971 | opp_overlap 852759, overlap 852732 CATACAACAACAAAT GCCCTGCAACCAC CGAA GTGATTACAGGGC GGGCGATGGCTATAC MADE_00819 853515 - 852772 - | hypothetical protein MADE_00820 853765 - 853562 - | hypothetical protein MADE_00821 853968 - 853756 - | hypothetical protein TERM 862 854235 - 854245 + GH 76 -8.2 -4.12738 | TACGGGAATCGGGGT CGGG AGT CCCG TTTCCTTTGATGTGG MADE_00822 854213 - 854917 + | hypothetical protein TERM 863 855037 - 855018 - gf 81 -3.4 -5.42259 | GCAGGGGCAAAAAAA CGCATGTC TGAC GACCAGCG CGAGATGCTCAAGCA TERM 864 855387 - 855399 + GF 93 -9.1 -4.7497 | CACGGCGACCTAGTA CCTGG GGA CCAGG TTTTTCATCCGTCGG TERM 865 855564 - 855553 - gf 84 -2.2 -5.74288 | overlap 855562 ACAAACAAGAAAAAA CGGT AGAA ACCA AATGGTTTCTGGAGA TERM 866 856156 - 856182 + GF 80 -10.2 -3.65522 | overlap 856157 856159 GAACTAAGCCATATT TCGTTGTGGGGT TTA ACCCTACAATGG TTATTCCCGTAGCTC TERM 867 856157 - 856181 + GF 80 -11.5 -2.78992 | overlap 856156 856159 AACTAAGCCATATTT CGTTGTGGGGT TTA ACCCTACAATG GTTATTCCCGTAGCT TERM 868 856159 - 856179 + GF 75 -10.5 -2.94045 | overlap 856157 856156 CTAAGCCATATTTCG TTGTGGGGT TTA ACCCTACAA TGGTTATTCCCGTAG TERM 869 856223 - 856210 - gf 76 -5.3 -4.77036 | CTCTATCACGAAAAA GAATC ACAA GATTC CCTACTGAAAGACGA MADE_00823 854889 - 857630 + | phage uncharacterized protein MADE_00824 857627 - 857815 + | hypothetical protein MADE_00825 857866 - 858105 + | gp24 TERM 870 858124 - 858108 - f 76 -6.7 -4.41047 | AGTTGTCAAGTAAAA TATAATC ATT GATTATA ACTAGAAAGTATTAT TERM 871 859573 - 859555 - gf 83 -5.3 -5.24129 | opp_overlap 859555 TGCTTGCAGAAAAAA TCCTAGA ACTTA TCCAGGA CTTCTACACCCAAGA MADE_00826 858138 - 860240 + | hypothetical genomic island protein TERM 872 860351 - 860312 - g 72 -9.3 -3.56821 | ATGACAGCGGTGAAA TCGATCGCGGGGATGTC ATCGAA GACACCCCAGAAATCGA AGACGTACAGCCAGA MADE_00827 860215 - 861240 + | hypothetical protein TERM 873 861248 - 861270 + F 77 -9.4 -3.53733 | overlap 861246 TTCTTTAGTTGCACC TATTATAATC ATT GATTATAATA TATTTATAAACTCGA TERM 874 861543 - 861527 - g 73 -10.9 -2.63596 | GGGGACTTCACATGA CTCGATG ATT CATCGAG TAACAGAACTTACTA MADE_00828 861408 - 862523 + | conserved hypothetical genomic island protein TERM 875 862542 - 862556 + F 77 -7.8 -4.16842 | TTGGGTCGTAAGGGC GGGGCA GGA TGCTCC TTTCTTACCACTACG MADE_00829 862664 - 862786 + | hypothetical protein MADE_00830 862797 - 863483 + | hypothetical protein MADE_00831 863483 - 864085 + | hypothetical protein TERM 876 864238 - 864255 + G 89 -5.5 -5.79595 | opp_overlap 864238 864240, overlap 864240 CTTTTAATATTAGAA GACTACG AATA CGTAGGC TTTTTTGTTTTACAC MADE_00832 864079 - 864498 + | hypothetical protein MADE_00833 864500 - 865141 + | hypothetical protein TERM 877 865599 - 865583 - f 71 -6.7 -4.08394 | ATATGCGTGTTAAAA TATAATC AAT GATTATA GTAAGGCCGAAAAAA TERM 878 865672 - 865683 + G 70 -2.2 -5.03314 | CTAGTCTAACAACAC CGTT GTCG AGCG TTTTTTCAGACTCGG MADE_00834 865653 - 866192 + | hypothetical protein TERM 879 867330 - 867316 - g 78 -5 -4.99638 | ACAGGTACAGAAAAA TACGAC ACT ATCGTA ACGAACCTGTCTAGC MADE_00835 866194 - 867987 + | hypothetical protein TERM 880 868459 - 868449 - g 74 -8.2 -3.92542 | opp_overlap 868449 GTCACTCGTAAACAA GCGC TTG GCGC TTTCAAAGCAGGGCT TERM 881 869449 - 869438 - g 71 -3.6 -4.87133 | AGCGCCGAAAGAAAA CACG TTAC CGCG CGACCAGATGCGCTC TERM 882 870572 - 870559 - g 76 -8.1 -4.09108 | overlap 870560 CTCAACTTACAGAAA TGGGG TTGC CCCCA CGCGCCGTGGATGAC TERM 883 871117 - 871104 - g 76 -2.3 -5.28826 | AAAGGCGATAAAAAA GCCCA AGAT CGAGC ACGCCAGGAAATCAC TERM 884 871354 - 871330 - g 75 -11.4 -3.10879 | overlap 871328 871320 871316 ACGAACTCGAAGATA CGTTTGCCGG GCCAA CCGGCAGACG CGACATCGATACGGA MADE_00836 867993 - 874442 + | hypothetical protein TERM 885 874461 - 874445 - f 73 -6.7 -4.25104 | TCTTTTCCAGTAAAA TATAATC AAT GATTATA TGAGGTTGATATGTC TERM 886 874964 - 874976 + G 70 -9.1 -3.40082 | TCTGTGCCTAGTCTG CCGAG CAA CTCGG TTGATGTGTATTTCC MADE_00837 874472 - 876115 + | hypothetical protein MADE_00838 876169 - 878508 + | hypothetical protein TERM 887 878837 - 878817 - g 79 -8.3 -4.22652 | opp_overlap 878798, overlap 878818 TTATACCATTGAAAA GTCGTTTGC GCG GCAAACGAA CGCTGGACTAGCATC TERM 888 878836 - 878818 - g 79 -11.8 -3.13109 | opp_overlap 878798, overlap 878817 TATACCATTGAAAAG TCGTTTGC GCG GCAAACGA ACGCTGGACTAGCAT MADE_00839 878578 - 880152 + | hypothetical protein TERM 889 881423 - 881451 + G 73 -4.5 -4.83169 | overlap 881427 CCTCAAATGGATAAT GCGGTATCAGTGC AAG GTACTGAGAATGC TTTTTCTAGCCAGAT MADE_00840 880145 - 883036 + | hypothetical protein TERM 890 886255 - 886285 + G 77 -9 -3.94002 | opp_overlap 886250 886264 ACGCTTGAAACCTCG GACCTAGAATCTGG AAC CCAGATCGTGGGTC TTTGGTTAGGTAGTA MADE_00841 883048 - 886344 + | PKD domain protein MADE_00842 886344 - 886781 + | hypothetical protein TERM 891 886817 - 886841 + G 73 -7.8 -4.14472 | overlap 886818 TTGAGCGTAGCATTA GGTTTGGCGC AGTAC GCGCCAGACA TTTTAAAGCTATTCG TERM 892 886818 - 886840 + G 75 -11.3 -3.08201 | overlap 886817 TGAGCGTAGCATTAG GTTTGGCGC AGTAC GCGCCAGAC ATTTTAAAGCTATTC MADE_00843 886787 - 887320 + | hypothetical protein MADE_00844 887666 - 888064 + | hypothetical protein TERM 893 888897 - 888883 - g 73 -2.1 -5.23292 | overlap 888887 CCATACAAAATAAAA TGAAC GACAA GTCCA TGCCGTTTAAATAAA MADE_00845 888264 - 888911 + | hypothetical protein TERM 894 888912 - 888940 + T 84 -8.2 -4.82855 | gap 1, opp_overlap 888915 888919, overlap 888916 888919 ATGCCGTTTAAATAA AAAGAAACCCCGC AAAT GCGGGG-TTCTTC TTTTTGGCTTTACTA TERM 895 888937 - 888915 - T 100 -9.9 -5.27335 | gap 1, opp_overlap 888912 888916 888919, overlap 888919 CCGTTTAAATAAAAA GAAACCCCGC AAAT GCGGGG-TTC TTCTTTTTGGCTTTA TERM 896 888916 - 888937 + T 91 -10.1 -4.50298 | opp_overlap 888915 888919, overlap 888912 888919 CGTTTAAATAAAAAG AAACCCCGC AAAT GCGGGGTTC TTCTTTTTGGCTTTA TERM 897 888934 - 888919 - T 100 -11.8 -5.12987 | opp_overlap 888919 888916 888912, overlap 888915 TTAAATAAAAAGAAA CCCCGC AAAT GCGGGG TTCTTCTTTTTGGCT TERM 898 888919 - 888934 + T 95 -11.8 -4.32491 | opp_overlap 888915 888919, overlap 888916 888912 TTAAATAAAAAGAAA CCCCGC AAAT GCGGGG TTCTTCTTTTTGGCT MADE_00846 889691 - 889107 - | Endodeoxyribonuclease MADE_00847 890042 - 890179 + | hypothetical protein MADE_00848 890584 - 891150 + | yecA family protein TERM 899 891478 - 891506 + G 79 -8.1 -4.3586 | ATTTGGCATGGTAAG CGCCTTGGTGCAG AGG CTGCATTAGCGCG TTTTAGTCTCGATGA MADE_00849 891205 - 892518 + | proline aminopeptidase P II MADE_00850 892694 - 894037 + | 2-octaprenyl-6-methoxyphenyl hydroxylase TERM 900 894546 - 894533 - g 76 -8.1 -4.15044 | TTCGTTTGTAAGAAA GCAGG CTGG CCTGC CAATTACCTTCAAAG MADE_00851 894024 - 895196 + | 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase TERM 901 895209 - 895245 + F 79 -6.8 -4.5442 | gap 2, opp_overlap 895198 895209, overlap 895222 TAAACCCAAAAATTA TGGGGTCAAAGTCTGAGG GAA CCTCA--TTTTGACTCCA TTTTGTGCTTACCCA TERM 902 895222 - 895234 + F 77 -7.7 -4.22948 | opp_overlap 895209, overlap 895209 TATGGGGTCAAAGTC TGAGG GAA CCTCA TTTTGACTCCATTTT MADE_00852 895263 - 895382 + | hypothetical protein MADE_00853 895413 - 896288 + | hypothetical protein MADE_00854 896388 - 897695 + | putative metal-dependent dipeptidase MADE_00855 897925 - 898857 + | exopolyphosphatase-related protein TERM 903 898876 - 898904 + T 90 -9.6 -4.3898 | opp_overlap 898877, overlap 898877 ATAGTCATTTAGTAA AGGGCAAGACAG TACCC TTGTCTTGCCCC TTTTGTAACACTCGT TERM 904 898877 - 898903 + T 91 -13.1 -3.22906 | opp_overlap 898877, overlap 898876 TAGTCATTTAGTAAA GGGCAAGACAG TACCC TTGTCTTGCCC CTTTTGTAACACTCG TERM 905 898903 - 898877 - T 90 -12.4 -3.767 | opp_overlap 898876 898877 TAGTCATTTAGTAAA GGGCAAGACA GTACCCT TGTCTTGCCC CTTTTGTAACACTCG MADE_00856 900569 - 898935 - | putative L-lactate permease, LctP TERM 906 898996 - 898982 - G 74 -7.1 -4.25848 | AACTGCCTACTAAAA TGGCG TATAT CGCCA GAATACCCGCCGCTT TERM 907 899238 - 899217 - G 82 -2.9 -5.47399 | overlap 899225 899226 CGAACCGGAAAAAAA GCTACCAAG CGCA CCAAGTAGC GGTGCGAAAAGGGGC TERM 908 899710 - 899728 + g 72 -5.9 -4.51477 | GCCTTGGCAAGTTCT CTGCCAC TGGGT GAGGCAG TCTTTTTTTGTGTAT MADE_00857 901752 - 900904 - | putative bacterial regulatory protein LysR Family MADE_00858 901901 - 901767 - | hypothetical protein TERM 909 902107 - 902093 - g 76 -8.6 -4.09243 | overlap 902096 GAGAGCTTGCTAAAA CATCCA TAA TGGATG GCGTAAACAAAGCTA TERM 910 902201 - 902225 + G 71 -10 -3.29325 | overlap 902199 CATCACAATGTATCG TTGGCGCCGG GCTTG CTGGCGCTAA TATTACTTCTGCAAA MADE_00859 901951 - 902865 + | ATPase, BadF/BadG/BcrA/BcrD type TERM 911 903174 - 903144 - g 73 -4.1 -4.78237 | gap 1, overlap 903145 903147 GAGTGCACAACAAAA TTATACCCGGGTTT GTAG ACACCCAGGTA-AA CGGTGGCGGTGGCGT MADE_00860 902987 - 904126 + | N-acetylglucosamine-6-phosphate deacetylase MADE_00861 904492 - 905571 + | aminomethyltransferase MADE_00862 905611 - 906000 + | glycine cleavage system protein H TERM 912 906068 - 906031 - f 71 -9.4 -2.79965 | gap 1, opp_overlap 906038, overlap 906027 906038 TAAAAGAACCATAAT TTGAAAAGGGGCATGAA GATAA TTCA-GCCCCTTTTTAA CTTAAAGATTTAACG TERM 913 906061 - 906038 - f 76 -7.5 -4.22338 | gap 1, opp_overlap 906038, overlap 906031 906027 ACCATAATTTGAAAA GGGGCATGAA GATAA TTCA-GCCCC TTTTTAACTTAAAGA TERM 914 906038 - 906061 + F 83 -7.5 -4.74103 | gap 1, opp_overlap 906038 906031 906027 ACCATAATTTGAAAA GGGGCATGAA GATAA TTCA-GCCCC TTTTTAACTTAAAGA MADE_00863 906107 - 909019 + | glycine dehydrogenase TERM 915 909069 - 909088 + F 100 -6.4 -5.75342 | opp_overlap 909069 TAATTTGAATTATAA GGCGAACT GGTT GGTTCGTC TTTTTTTTCAAAAAA TERM 916 909823 - 909813 - g 76 -8.2 -4.09739 | opp_overlap 909813 909811 CCAAGGTTCTCAAAA GCGC AAA GCGC TGTTATTGAGCAAGA MADE_00864 909171 - 910007 + | predicted transcriptional regulator i A1501 TERM 917 910190 - 910177 - g 73 -2.3 -5.22039 | GGTAAAGCTAAAAAA GACAG TGAG CAGTC GGGCGCAGATTATCA TERM 918 910375 - 910385 + G 71 -6.8 -4.1891 | GGGAAATTTGCTTCT GCCT TTC AGGC TTTGTATTCAAGCGA TERM 919 911341 - 911330 - g 71 -3.6 -4.74285 | ACGCAGAAGACAAAA CCGC ACTC GCAG AATGTCATAGATGGC TERM 920 911389 - 911377 - g 89 -6.2 -5.41143 | GACTCTCGAAAAAAA GCGC TGCTT GCGC CGGTAGGTGTCGGCA TERM 921 912829 - 912839 + G 82 -6.8 -4.83169 | CGCTTTGGTTACTCT CCAG TCT CTGG TTTTTATCAAAAAAT MADE_00865 910126 - 912873 + | CRISPR-associated helicase Cas3 MADE_00866 912870 - 914477 + | CRISPR-associated protein, Cse1 family MADE_00867 914477 - 915046 + | CRISPR-associated protein, Cse2 family MADE_00868 915182 - 916129 + | CRISPR-associated protein, Cse4 family MADE_00869 916179 - 916874 + | CRISPR-associated protein Cas5 family MADE_00870 916874 - 917542 + | CRISPR-associated protein, Cse3 family TERM 922 917677 - 917665 - g 71 -3.3 -4.85782 | opp_overlap 917649 917672 CGGTTCAAAAATAAA GACCG AAC CGGTG TGATAATCGGTAATT TERM 923 917789 - 917749 - g 91 -10.9 -4.26351 | gap 1, opp_overlap 917761 GAGCAACTCAATAAA TCTCTTTTTAAAGTCATC CAATTC GATGACTTTAAAAA-AGA AGGAGGGTTGAATAG TERM 924 917852 - 917840 - g 78 -6.3 -4.61199 | AGTGGATAGAGAAAA CCAAT GCG ATTGG ACTCATTTCAAAGGC MADE_00871 917563 - 918384 + | hypothetical protein MADE_00872 918387 - 919307 + | CRISPR-associated protein Cas1 MADE_00873 919436 - 919615 + | CRISPR-associated protein Cas2 TERM 925 920722 - 920755 + T 76 -10.9 -2.66912 | opp_overlap 920713 ACGGAATGGGCTTCG GCGGGTGTTCCCCGT GCCC ACGGGGATGAACCGC TCGTATAAATTAGCT MADE_00874 921432 - 921247 - | hypothetical protein TERM 926 921555 - 921565 + r 70 -5.4 -4.4767 | overlap 921546 ATGAACCGGTTATCT GAAG CCG CTTC TTTTGTCCTAAGTGG TERM 927 922369 - 922401 + r 71 -7 -4.12296 | gap 1, opp_overlap 922359 922369 922367 TAAACCATACCAAGA CGGTGTGTTCCCCGT GCCC ACGGGG-ATGAACCG TTATTTAGTTGTAGC TERM 928 922564 - 922553 - R 71 -7.2 -3.89822 | opp_overlap 922553, overlap 922554 CAGCGAGTGTACAAA GGGG TGTT CCCC GTGCCCACGGGGATG MADE_00875 923291 - 922839 - | hypothetical protein MADE_00876 924655 - 923312 - | filamentation induced by cAMP protein Fic TERM 929 923828 - 923841 + g 72 -6.7 -4.371 | GCCTTTAGCGGCCAT GGCAT CTAA ATGCC TTTTACTCTCGTCAG MADE_00877 924850 - 924984 + | hypothetical protein MADE_00878 925925 - 925029 - | two-component response regulator MADE_00879 929220 - 925918 - | two-component hybrid sensor and regulator TERM 930 926417 - 926437 + g 71 -7 -4.13767 | opp_overlap 926420 TGGTGACTTTCTAAT TGAGAAAA CGTTT TTTTCTCA TTTTCCGCTAGCAAC TERM 931 928252 - 928237 - G 74 -3.3 -5.02502 | TACACGAGAGAAAAA GTTAG ACCATG CTAAC GAGCCTGCATACGCA MADE_00880 929525 - 930526 + | phosphate-selective porin O and P MADE_00881 930625 - 931836 + | ABC-type branched-chain amino acid transport system, periplasmic component TERM 932 933182 - 933209 + G 72 -5.7 -4.42238 | gap 1, opp_overlap 933181 GGCGCCTGAATGGAT GACGGGATCTTG GGTTA TAA-ATCCCGTC TTTTCGTTAACCTAC MADE_00882 932067 - 933683 + | Branched-chain amino acid ABC-type transport system, permease component TERM 933 933859 - 933869 + G 71 -6.8 -4.19238 | TTTAGGAAAGTATTT GTGC TAT GCAC TTTTGGCCTTAGCCG MADE_00883 933683 - 934861 + | ABC-type branched-chain amino acid transport system, permease component MADE_00884 934858 - 935688 + | ABC transporter-like protein MADE_00885 935722 - 936417 + | putative branched-chain amino acid transport protein (ABC superfamily, ATP_bind) MADE_00886 936431 - 937393 + | putative urease accessory protein UreD MADE_00887 937419 - 937721 + | Urease MADE_00888 937753 - 938061 + | probable urease (beta subunit) protein MADE_00889 938061 - 939764 + | urease, alpha subunit MADE_00890 939777 - 940241 + | Urease accessory protein UreE MADE_00891 940314 - 940940 + | Urease accessory protein UreF MADE_00892 940992 - 941603 + | urease accessory protein UreG TERM 934 941846 - 941880 + T 73 -8.7 -3.69323 | opp_overlap 941846 941849, overlap 941849 ATTTTAGAGAGTTAA CAACCTACGAATAAT ATTGA AATAGTCGTAGGTTG TTTGAATAATCATAA TERM 935 942243 - 942231 - T 72 -3.4 -5.0133 | opp_overlap 942239 CAGTGCGGTAAAAAA CTCA CATTC TGAG AACACTTAGCTTTAC MADE_00893 943779 - 942265 - | putative non-ribosomal peptide synthetase TERM 936 943063 - 943053 - G 73 -4.6 -4.87133 | opp_overlap 943053 ATGGTTTAAACAAAA GCCG TTG CGAC ATAGTCGGCAGGGGC MADE_00894 944018 - 943899 - | hypothetical protein TERM 937 943956 - 943939 - G 74 -3.4 -5.00616 | overlap 943941 TTGCCTGTCAAAAAA TAGCCA GATAAA TGGCCA GTTAAAAAGAAAAAA TERM 938 943996 - 943972 - G 100 -6.5 -5.93252 | gap 1, opp_overlap 943972 GTTAAAAAGAAAAAA GCCGCATTCA GCAACG TG-ATGCGGC TTTCCGAGCCGGGCT MADE_00895 944319 - 944164 - | hypothetical protein TERM 939 944650 - 944630 - g 82 -6.9 -4.82901 | overlap 944631 GTTGCTTGATAAAAA TCAGCAAAA GCG TTTTGCTGT AAGCAATGTGCCAAG TERM 940 944649 - 944631 - g 79 -10.4 -3.49419 | overlap 944630 TTGCTTGATAAAAAT CAGCAAAA GCG TTTTGCTG TAAGCAATGTGCCAA TERM 941 944874 - 944891 + G 75 -11.3 -3.01924 | opp_overlap 944873 944874 CGCCAGTCGCCAAAG GTGACCG GGAA CGGTCAC TATTCACACCGCATG TERM 942 944891 - 944874 - g 73 -11.3 -2.73124 | opp_overlap 944874, overlap 944873 CGCCAGTCGCCAAAG GTGACCG GGAA CGGTCAC TATTCACACCGCATG MADE_00896 944376 - 945560 + | dehydrogenase TERM 943 946966 - 946952 - g 89 -6.4 -5.40474 | opp_overlap 946938 946952 ACTGTTTGAAAAAAA GCAGTA CTT TACCGC TTGGTTTAGAAAAGA MADE_00897 945651 - 948305 + | GAF:ATP-binding region, ATPase-like:Histidine kinase A, N-terminal TERM 944 948575 - 948565 - g 74 -5.4 -4.59853 | CCAAGGGGCTAAAAA GCTT TCA AAGC ACCTTCGCTAAGCTT MADE_00898 948426 - 948878 + | hypothetical protein MADE_00899 952153 - 948941 - | sensory box histidine kinase/response regulator MADE_00900 952374 - 952171 - | hypothetical protein MADE_00901 953218 - 952391 - | putative methylase MADE_00902 953395 - 953835 + | hypothetical protein MADE_00903 956045 - 954006 - | RecQ domain protein TERM 945 954125 - 954112 - G 75 -6.7 -4.5123 | AAGCGACTAAACAAA GGCAT AGTC ATGCC AGTTAGGAAGCGACA TERM 946 954831 - 954849 + g 76 -7.4 -4.34789 | overlap 954829 954843 TAAGCTATTTATTTG GGTTTCCC ATT GGTAAACC TTGTTTTCTGCATTG TERM 947 955355 - 955367 + g 73 -4.1 -4.82855 | TAACGTAAACAATCC CAGCA CCT TGTTG TTTTTGAATTTCGTC MADE_00904 956737 - 956192 - | putative secreted protein TERM 948 957174 - 957162 - g 71 -3.4 -4.84359 | CGATGCTGATAAAAA TGCA TTGGT TGCA CCGGTACACAAGCCT MADE_00905 956962 - 958086 + | possible NADH oxidoreductase TERM 949 958184 - 958197 + TF 74 -3.7 -5.0916 | opp_overlap 958185, overlap 958185 TTAAAGGTACATTAA AGGCC ACCG GGCCC TTTTTGTATTAAGCA TERM 950 958196 - 958185 - Tf 71 -7.2 -3.87354 | opp_overlap 958185 958184 TAAAGGTACATTAAA GGCC ACCG GGCC CTTTTTGTATTAAGC MADE_00906 959354 - 958275 - | major facilitator family protein TERM 951 958921 - 958904 - Gf 80 -7.7 -4.3534 | CCTTAACCACGAAAA GCGTAGC GGTG ACTACGC ACGCAATAGCCACAT TERM 952 958987 - 958977 - Gf 72 -8.2 -3.78597 | AGCCACTAATGTAAA CGCC ATT GGCG GGCCTACTACCCAGG MADE_00907 959353 - 959481 + | hypothetical protein MADE_00908 960296 - 959622 - | nitroreductase family protein TERM 953 960434 - 960408 - R 93 -9.5 -4.98531 | opp_overlap 960408 CGCGTAAACTAAAAA GCGACCCATTC AGGCA AAATGGATCGC TTTGGTGCAGTTTAT TERM 954 960489 - 960501 + r 86 -4.7 -5.36689 | GCGTTTAAATGGGGG GCGAG TAC CACGC TTTTGTTTTTCGTTT MADE_00909 960836 - 960468 - | secreted protein TERM 955 961031 - 961045 + H 70 -5.7 -4.3208 | overlap 961009 961007 GCGGGCTTAGGTTTT GCACT ATTTA AGTGC TTTTGACTTGTGACG TERM 956 961192 - 961177 - g 83 -2.4 -5.6473 | opp_overlap 961177 AGAATAGTAAAAAAA GCGGCG AAGG CGTCAC TTTTAACATCGCTAT MADE_00910 961138 - 961626 + | hypothetical protein TERM 957 961677 - 961660 - T 100 -11.3 -5.31456 | opp_overlap 961652 961660 CCAAGCTACAAAAAA GCGAACC CTAA GGTTCGC TTTGACGCTTTATGA TERM 958 961660 - 961677 + T 88 -11.3 -3.65426 | opp_overlap 961660, overlap 961652 CCAAGCTACAAAAAA GCGAACC CTAA GGTTCGC TTTGACGCTTTATGA MADE_00911 962119 - 961709 - | Late embryogenesis abundant protein TERM 959 961764 - 961774 + g 72 -3.2 -5.08824 | TTCATTTTTACGCAT GCTT CAT AGGC TTTTTTCGCTGCGGC MADE_00912 962626 - 962318 - | putative orphan protein MADE_00913 963174 - 962626 - | YaeQ TERM 960 963059 - 963038 - G 73 -4.5 -4.79352 | gap 1, opp_overlap 963042 963045, overlap 963042 963045 GCATTTACAATAAAA GCAATAATGC GCA GCATCAT-GC GCGCATCGTTTTCAG TERM 961 963064 - 963045 - G 76 -8.6 -4.0219 | gap 1, opp_overlap 963045 963042, overlap 963042 963038 CAATAAAAGCAATAA TGCGCAGCA TCA TGC-GCGCA TCGTTTTCAGACGGG MADE_00914 963327 - 963208 - | hypothetical protein MADE_00915 963485 - 963339 - | hypothetical protein MADE_00916 963672 - 963469 - | hypothetical protein MADE_00917 964776 - 963823 - | putative ribonuclease protein TERM 962 964472 - 964453 - G 80 -5.6 -5.08088 | overlap 964454 AAGGGTGAATAAAAA GCCCCACC CCAA GGTGGAGT TAGACTTCTCGATCA TERM 963 964471 - 964454 - G 72 -9.1 -3.63768 | overlap 964453 AGGGTGAATAAAAAG CCCCACC CCAA GGTGGAG TTAGACTTCTCGATC TERM 964 965254 - 965236 - g 76 -7.4 -4.27316 | TTGTTGAACCTAAAA CCTTGTTC ACC GAGCAAGG CGCTAAGGTAGACAT MADE_00918 965148 - 965699 + | protease MADE_00919 965856 - 966548 + | Short-chain alcohol dehydrogenase of unknown specificity MADE_00920 966895 - 967782 + | short-chain dehydrogenase/oxidoreductase TERM 965 968063 - 968052 - g 76 -4.4 -5.03201 | AATAATAATGAAAAA GCTT CTTA AAGC GGCAGTTGCTGTATC TERM 966 968128 - 968118 - g 70 -2.4 -4.99035 | CTACGCAGATAAAAA CGAC AAA GACG AAATATTTAGCAGCT MADE_00921 968044 - 971298 + | BNR/Asp-box repeat protein TERM 967 971305 - 971341 + F 72 -9.3 -3.30767 | opp_overlap 971312, overlap 971300 971305 971306 971308 AATAAATAGCGAAAC GGGCAAAGCGCATGGGG TTA CCTCATGCGCAATGTCA TCTTACCTTTTTATA TERM 968 971306 - 971340 + F 83 -12.8 -2.57375 | opp_overlap 971312, overlap 971305 971305 971300 971308 ATAAATAGCGAAACG GGCAAAGCGCATGGGG TTA CCTCATGCGCAATGTC ATCTTACCTTTTTAT TERM 969 971308 - 971338 + F 81 -11.8 -2.80922 | opp_overlap 971312, overlap 971306 971305 971305 971300 AAATAGCGAAACGGG CAAAGCGCATGGGG TTA CCTCATGCGCAATG TCATCTTACCTTTTT TERM 970 971334 - 971312 - f 95 -13.4 -3.64236 | opp_overlap 971308 971306 971305 971305 971300 AGCGAAACGGGCAAA GCGCATGGGG TTA CCTCATGCGC AATGTCATCTTACCT MADE_00922 971329 - 971451 + | hypothetical protein TERM 971 971725 - 971713 - g 79 -7.7 -4.43189 | ATCAATTTGATAAAA GTCAC CTG GTGAC GCCGCTACACACCAA MADE_00923 971544 - 973490 + | heme transport protein HutA MADE_00924 974033 - 973494 - | hypothetical protein TERM 972 974178 - 974154 - R 91 -12.9 -3.11687 | opp_overlap 974152 974154 GTAATGATGAGCGAA GAGACGGCCTT TAG AAAGCCGCCTC TATTTATCATTACTG TERM 973 974154 - 974178 + r 73 -8.5 -3.63241 | opp_overlap 974154, overlap 974152 GTAATGATGAGCGAA GAGACGGCCTT TAG AAAGCCGCCTC TATTTATCATTACTG MADE_00925 976413 - 974188 - | Xanthine dehydrogenase TERM 974 974796 - 974809 + g 80 -5.9 -5.0916 | overlap 974797 ATTCGCCTTGTTCCA TGCGC AGCC GCGCG TTTTTATATTCGCCC TERM 975 974855 - 974865 + g 72 -3.2 -5.00616 | ATTTTTTGCGTTAGC GCTT CAC AGGC TTTTTTCACCGCAGA MADE_00926 977425 - 976400 - | putative oxidoreductase subunit TERM 976 976584 - 976608 + g 71 -7.9 -3.92373 | gap 1 TCTTGAGAAAGCTCT GCGCC-TTCG AGTACA CGAATGGCGC TTTGTGGGTACCATG TERM 977 977460 - 977441 - R 82 -10.8 -3.55761 | opp_overlap 977445 TATTGACGCTCCAAA GCAATCAC ATCA GTGATTGC ATCTACGATATTGGG MADE_00927 977922 - 977425 - | putative oxidoreductase, iron-sulphur binding subunit TERM 978 977548 - 977573 + g 74 -5.5 -4.7078 | gap 1, overlap 977551 TGAGGCGCGGTTGCT GTAGGTGACC GCGCTAG GGTCACC-AC TTTTTAGCTCATTGA MADE_00928 978156 - 978836 + | hypothetical protein MADE_00929 978847 - 978966 + | hypothetical protein MADE_00930 978992 - 979540 + | Lactoylglutathione lyase MADE_00931 979516 - 979638 + | hypothetical protein TERM 979 979622 - 979657 + T 100 -16.4 -4.43844 | opp_overlap 979622 979627, overlap 979627 ACTATCAAACACAAC GAAAACAGGCAGCATA GTAA TATGCTGCCTGTTTTG TTTTATCGATGGTAA TERM 980 979657 - 979622 - T 100 -16.4 -2.91671 | opp_overlap 979622 979627, overlap 979627 ACTATCAAACACAAC GAAAACAGGCAGCATA GTAA TATGCTGCCTGTTTTG TTTTATCGATGGTAA TERM 981 979627 - 979652 + T 100 -16.3 -5.19275 | opp_overlap 979622 979627, overlap 979622 CAAACACAACGAAAA CAGGCAGCATA GTAA TATGCTGCCTG TTTTGTTTTATCGAT TERM 982 979652 - 979627 - T 100 -16.3 -4.58724 | opp_overlap 979627 979622, overlap 979622 CAAACACAACGAAAA CAGGCAGCATA GTAA TATGCTGCCTG TTTTGTTTTATCGAT MADE_00932 983182 - 979712 - | hypothetical protein TERM 983 979908 - 979927 + g 83 -9.2 -4.22652 | CGTAGTTTGTTGTAA CGCGCGAT GCTT AACGCGCG TTTTACGTCATCTCC TERM 984 980312 - 980326 + g 75 -10 -3.54129 | overlap 980300 TACGCGCAGGCCAGG GCGCTT GTT AAGCGC TTTAGCAAGGGTATC TERM 985 980448 - 980458 + g 72 -8.2 -3.81689 | AGTAGTGAGAAGGGG GCGG TTA CCGC TTTAGTAATAATATT TERM 986 981060 - 981075 + g 73 -4 -4.81523 | gap 1, opp_overlap 981048, overlap 981048 981059 GAAGCGGCTTCGCTT GT-CGAC GAT GTCGCAC TTTTACTTTTTGCTT TERM 987 981828 - 981840 + g 78 -6.2 -4.62471 | TCAGCATCTACTTCA GCGC TGGGT GCGC TTTTTGCCGCTTGCG MADE_00933 983867 - 983277 - | hypothetical protein TERM 988 983752 - 983762 + g 75 -3.2 -5.26316 | CTGCTGGTGGTAACA GTTG TAT CAGC TTTTTTATCGCCTAG TERM 989 984026 - 984042 + r 75 -8.1 -4.07568 | opp_overlap 984026 ATACTGTAGAGAAAA TGTAAAG GCG CTTTACA TTTTCGCGAAAAGAA TERM 990 984042 - 984026 - R 82 -8.1 -4.54449 | opp_overlap 984026 ATACTGTAGAGAAAA TGTAAAG GCG CTTTACA TTTTCGCGAAAAGAA TERM 991 984095 - 984124 + r 90 -12.3 -3.64915 | opp_overlap 984095 984097, overlap 984097 984103 GTCAATTAGACAAAA CACTAAAAGGAGC GATT GCTCCTTTTAGTA TTCTACTTTGTAACA TERM 992 984124 - 984095 - R 100 -14.5 -4.614 | opp_overlap 984095 984097 984103, overlap 984097 GTCAATTAGACAAAA CACTAAAAGGAGC GATT GCTCCTTTTAGTA TTCTACTTTGTAACA TERM 993 984097 - 984122 + r 100 -14.9 -3.39897 | opp_overlap 984097 984095, overlap 984095 984103 CAATTAGACAAAACA CTAAAAGGAGC GATT GCTCCTTTTAG TATTCTACTTTGTAA TERM 994 984122 - 984097 - R 100 -14.9 -3.91421 | opp_overlap 984095 984097 984103, overlap 984095 CAATTAGACAAAACA CTAAAAGGAGC GATT GCTCCTTTTAG TATTCTACTTTGTAA TERM 995 984103 - 984116 + r 80 -8.1 -4.47259 | opp_overlap 984097 984095, overlap 984097 984095 GACAAAACACTAAAA GGAGC GATT GCTCC TTTTAGTATTCTACT MADE_00934 984496 - 984221 - | hypothetical protein MADE_00935 985015 - 984623 - | transcriptional regulator, BlaI family protein MADE_00936 987123 - 985138 - | adenylate cyclase, class I TERM 996 986396 - 986406 + g 80 -6.8 -4.59511 | opp_overlap 986405, overlap 986405 AACCAATCTAGATCT GGTG AAC CACC TTTTTCAAGGCTGTT TERM 997 986538 - 986552 + g 71 -7 -4.05446 | TGAGAAATAACGCTT GGGCGG AAC CCGCAC TTTCTCCTTCGGCAA TERM 998 986568 - 986578 + g 73 -2.4 -5.22258 | overlap 986559 986571 TTTCTCCTTCGGCAA CGCC AAA GTCG TTTTGTTTTACTTTG TERM 999 987214 - 987226 + r 95 -9.1 -5.44119 | AGAGTGAAAGTTTAT CGGCT TTT AGCCG TTTTTTTACCATGCC MADE_00937 988586 - 987210 - | sensor histidine kinase MADE_00938 989310 - 988600 - | transcriptional regulatory protein CpxR TERM 1000 989823 - 989804 - g 90 -10 -4.45544 | overlap 989805 GCGCAGCAAGTAAAA GCGCGCTT TCTA AAACGCGC GGAGATTCGTGCAAA MADE_00939 989477 - 989926 + | hypothetical protein TERM 1001 990010 - 989975 - T 88 -8.3 -4.66535 | opp_overlap 989975 989977, overlap 989976 989977 AATGCTTAAAATAAA TGCCCCCTTCATTGA CAAAAC TCAACGAAGGGGGTG TTTTAATTCCCACGC TERM 1002 989975 - 990010 + T 90 -10.5 -4.4078 | opp_overlap 989975 989976 989977, overlap 989977 AATGCTTAAAATAAA TGCCCCCTTCATTGA CAAAAC TCAACGAAGGGGGTG TTTTAATTCCCACGC TERM 1003 990009 - 989976 - T 86 -11.8 -3.38836 | opp_overlap 989975 989977, overlap 989975 989977 ATGCTTAAAATAAAT GCCCCCTTCATTGA CAAAAC TCAACGAAGGGGGT GTTTTAATTCCCACG TERM 1004 990008 - 989977 - T 95 -15.3 -2.62579 | opp_overlap 989975 989977, overlap 989976 989975 TGCTTAAAATAAATG CCCCCTTCATTGA CAAAAC TCAACGAAGGGGG TGTTTTAATTCCCAC TERM 1005 989977 - 990008 + T 100 -13.1 -3.8125 | opp_overlap 989977 989976 989975, overlap 989975 TGCTTAAAATAAATG CCCCCTTCATTGA CAAAAC TCAACGAAGGGGG TGTTTTAATTCCCAC MADE_00940 990686 - 990084 - | hypothetical protein TERM 1006 990400 - 990422 + g 82 -11.3 -3.56594 | overlap 990401 990421 TATCCCACAGCGATA TCGGCGTCT TCTTC AGACGCCGG TTTAAGACCCTTTGC TERM 1007 990401 - 990421 + g 78 -12.6 -2.73635 | overlap 990400 ATCCCACAGCGATAT CGGCGTCT TCTTC AGACGCCG GTTTAAGACCCTTTG MADE_00941 990862 - 991017 + | hypothetical protein MADE_00942 991852 - 991163 - | hypothetical protein MADE_00943 992238 - 991852 - | hypothetical protein TERM 1008 992196 - 992208 + g 83 -9.1 -4.28067 | opp_overlap 992195 992193 992196 TTGCATTAGCAACAT GGGCA AAC TGCCC TTTGTCTGTTGTTGA MADE_00944 994152 - 992470 - | Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region TERM 1009 993277 - 993312 + g 79 -10.4 -3.64487 | GATGATCACCGGTAC GCCACGGCCTTCTTCA CCAA TTAAGTATGCCGTGGC TTCTTGAAACTCTAC TERM 1010 994453 - 994469 + G 82 -10.9 -3.65425 | opp_overlap 994449 994452 TCTGAAAATAACATT CGCGTTA CGC TAACGCG TTTACAGTCTATGCA MADE_00945 994315 - 995115 + | PaaX-like protein MADE_00946 995138 - 996115 + | hypothetical protein MADE_00947 996118 - 996831 + | Signal transduction histidine kinase TERM 1011 996853 - 996873 + F 100 -14.7 -5.5112 | overlap 996840 ATGACGTGGTTATCA GCCCCGGCT TTT AGTCGGGGC TTTTTTATTGCTCAC TERM 1012 997266 - 997284 + G 73 -7.4 -4.11216 | AAGGCGTTCGTCGTG CAGATGGT TCT ACCATCCG TTTTGACGGTAACGC MADE_00948 997052 - 997420 + | ribosomal protein L14 MADE_00949 997433 - 997747 + | ribosomal protein L24 TERM 1013 997889 - 997865 - g 83 -6.6 -5.08824 | gap 1 CTCGGATTGAAAAAA TCACTCTAAAC ATGG GTTTAG-GTGA AGCAGTTGCTGACAA MADE_00950 997765 - 998304 + | ribosomal protein L5 TERM 1014 998378 - 998352 - g 86 -13.8 -3.18274 | overlap 998337 GGCACGCGAAGCTAA GCGTACTAAGCT AGT AGCTAAGTACGC TGAGAAGCGCGCCGC MADE_00951 998317 - 998622 + | 30S ribosomal protein S14 MADE_00952 998636 - 999028 + | 30S ribosomal subunit protein S8 MADE_00953 999042 - 999575 + | 50S ribosomal protein L6 MADE_00954 999576 - 999941 + | 50S ribosomal protein L18 MADE_00955 999951 - 1000451 + | 30S ribosomal subunit protein S5 MADE_00956 1000458 - 1000637 + | 50S ribosomal protein L30 MADE_00957 1000641 - 1001075 + | 50S ribosomal protein L15 TERM 1015 1001422 - 1001459 + G 82 -12.9 -3.06969 | opp_overlap 1001421 1001422 1001424, overlap 1001424 1001429 1001434 AGGCCGTCGTAAAAT TAGTCAGTACACGCGTT ATCT AACGCTTGTATTGGCTA TCTTCCAATCAATTG TERM 1016 1001424 - 1001457 + G 75 -11.1 -3.08992 | opp_overlap 1001422 1001421 1001424, overlap 1001422 1001429 1001434 GCCGTCGTAAAATTA GTCAGTACACGCGTT ATCT AACGCTTGTATTGGC TATCTTCCAATCAAT MADE_00958 1001096 - 1002400 + | preprotein translocase SecY MADE_00959 1002439 - 1002555 + | 50S ribosomal protein L36 TERM 1017 1002588 - 1002625 + F 82 -6.4 -4.87803 | opp_overlap 1002591, overlap 1002589 1002591 ATTTACAAAGCTAAG TAAGCAGAACCTGA ATTATACTTG TCAGGTTCTGCTAG TTTTGTTTAAAAGTA TERM 1018 1002591 - 1002622 + F 77 -10.3 -3.32684 | opp_overlap 1002591, overlap 1002589 1002588 TACAAAGCTAAGTAA GCAGAACCTGA ATTATACTTG TCAGGTTCTGC TAGTTTTGTTTAAAA TERM 1019 1002622 - 1002591 - f 77 -10.3 -3.44289 | opp_overlap 1002591 1002589 1002588 TACAAAGCTAAGTAA GCAGAACCTGA ATTATACTTG TCAGGTTCTGC TAGTTTTGTTTAAAA MADE_00960 1002731 - 1003087 + | ribosomal protein S13 MADE_00961 1003102 - 1003494 + | 30S ribosomal protein S11 TERM 1020 1003500 - 1003483 - f 74 -4.1 -5.08824 | CGTCCACCGAAAAAA CGTCG CGTTTAAT CGACG GACAGTTGGAGAAAG TERM 1021 1003720 - 1003699 - g 86 -4.3 -5.61881 | CGTGAAAAACAAAAA GTTCGTCGT ATGT ACGGCGTAC TGGAAAAGCAATTCC MADE_00962 1003519 - 1004139 + | 30S ribosomal protein S4 TERM 1022 1005125 - 1005115 - g 74 -6.8 -4.3739 | TATGCGCCTAGAAAA CTGG CCG CCAG AGAGCATCGCTGAAA MADE_00963 1004240 - 1005148 + | DNA-directed RNA polymerase alpha subunit MADE_00964 1005190 - 1005591 + | 50S ribosomal protein L17 TERM 1023 1005637 - 1005612 - f 100 -19.1 -4.91511 | opp_overlap 1005612 ACTCGATTAGAAAAA GGGGCCTGAGT GAAA ACTCAGGCCCC TTTTTTTGTGCCCAA TERM 1024 1005612 - 1005637 + F 100 -19.1 -5.60993 | opp_overlap 1005612 ACTCGATTAGAAAAA GGGGCCTGAGT GAAA ACTCAGGCCCC TTTTTTTGTGCCCAA TERM 1025 1005943 - 1005930 - g 79 -8.1 -4.2558 | opp_overlap 1005917 CAGTGTTTAGTAAAA CGCTG TCTA CAGCG TATGAACGGCTAAGT MADE_00965 1005872 - 1007221 + | putative flagellin MADE_00966 1007366 - 1008826 + | phosphomannomutase TERM 1026 1008887 - 1008860 - f 93 -5.7 -5.6473 | gap 1, opp_overlap 1008860 ACAATACGAAAAAAA TAGGGCAAAAGT GATGA ACTTC-GCCCTA TTTTTATTGCTACCT TERM 1027 1008860 - 1008887 + F 72 -3.5 -5.14163 | gap 1, opp_overlap 1008860 ACAATACGAAAAAAA TAGGGCAAAAGT GATGA ACT-TCGCCCTA TTTTTATTGCTACCT MADE_00967 1009005 - 1010411 + | mannose-1-phosphate guanylyltransferase TERM 1028 1010428 - 1010454 + F 72 -8.9 -3.28924 | gap 1, opp_overlap 1010424 1010434, overlap 1010434 TTAGAATAAGACTTT GAAAAA-GCACC GTAA GGTGCTTTTTTC TTATCCAGAGCACTC TERM 1029 1010447 - 1010434 - f 82 -8.1 -4.62302 | opp_overlap 1010428 1010434 TAAGACTTTGAAAAA GCACC GTAA GGTGC TTTTTTCTTATCCAG TERM 1030 1010434 - 1010447 + F 100 -8.1 -5.55769 | opp_overlap 1010434, overlap 1010428 TAAGACTTTGAAAAA GCACC GTAA GGTGC TTTTTTCTTATCCAG MADE_00968 1010709 - 1012904 + | putative glycosyltransferase family 2 protein MADE_00969 1012926 - 1013891 + | hypothetical protein TERM 1031 1014093 - 1014082 - g 72 -3 -4.98531 | CTTTGAAATGAAAAA CTTT TTGA AAAG ATTAGGCCTTCTCAA TERM 1032 1015311 - 1015296 - g 89 -4 -5.7946 | overlap 1015307 CGCTGAAGAAAAAAA TAAGCA AAGA TGCTCA CAAGCGTGAACCTTG MADE_00970 1014074 - 1015387 + | hypothetical protein MADE_00971 1015588 - 1017264 + | iduronate-sulfatase and sulfatase 1 precursor MADE_00972 1017360 - 1018703 + | hypothetical protein TERM 1033 1020684 - 1020707 + G 87 -6.8 -5.16071 | gap 1, opp_overlap 1020684, overlap 1020688 AAAGCTACAGAATAT GGGA-GTAGAG GTG CTCTACGTTCC TTTTTATTACTCATT MADE_00973 1019056 - 1021638 + | glycosyltransferase MADE_00974 1021639 - 1022316 + | hypothetical protein TERM 1034 1023261 - 1023244 - g 75 -9.9 -3.54307 | opp_overlap 1023238 1023256 AAGATTGCCCCGAAA CAGGGAT CACT ATCCCTG ACTGGGATTTGCTTC MADE_00975 1022322 - 1023458 + | hypothetical protein MADE_00976 1023534 - 1024397 + | hypothetical protein TERM 1035 1024808 - 1024796 - f 77 -6.3 -4.63184 | overlap 1024787 1024783 1024807 AATTGACCCTAAAAA GGTTA ACC TAACC TACTGGAGAGTAGAG MADE_00977 1024824 - 1024973 + | hypothetical protein MADE_00978 1025029 - 1025817 + | hypothetical protein TERM 1036 1026343 - 1026353 + F 89 -5.4 -5.5208 | GAACTAGCACCACTC TCTC GAT GAGA TTTTTTATATTATGC MADE_00979 1026365 - 1026484 + | hypothetical protein TERM 1037 1026710 - 1026693 - T 76 -6.9 -4.37092 | AGTTGGCTGAGAAAA CGGGCGA CTTC TCGTCCG CTAATCGAAACTGAC MADE_00980 1027102 - 1026890 - | ISDet2, transposase orfB MADE_00981 1028045 - 1027359 - | hypothetical protein MADE_00982 1029190 - 1028045 - | putative lipopolysaccharide A protein TERM 1038 1028302 - 1028316 + g 86 -11.4 -3.68265 | opp_overlap 1028304 CCCAAGGCTCTAGAC CAGCGC ACA GCGCTG TTTCCCATTCGCTTT MADE_00983 1029866 - 1029183 - | hypothetical protein MADE_00984 1030273 - 1029869 - | hypothetical protein MADE_00985 1032612 - 1030666 - | hypothetical protein TERM 1039 1030728 - 1030708 - G 82 -7.6 -4.58663 | opp_overlap 1030708 1030709, overlap 1030686 1030709 ATTATTTTGTAAAAA CTCTTCCC AAGAG GGGAAGAA TTGTCCATCGTAGTT TERM 1040 1030727 - 1030709 - G 70 -8.9 -3.34716 | opp_overlap 1030709 1030708, overlap 1030686 1030708 TTATTTTGTAAAAAC TCTTCCC AAGAG GGGAAGA ATTGTCCATCGTAGT TERM 1041 1031923 - 1031907 - G 72 -6.7 -4.26189 | opp_overlap 1031907 CTATAAATCTTAAAA TATTAAC TCT GTTAATA TTATTGTTCGCACCA MADE_00986 1033510 - 1032599 - | glycosyl transferase, family 2 MADE_00987 1034192 - 1033560 - | hypothetical protein MADE_00988 1034371 - 1035252 + | glucose-1-phosphate thymidylyltransferase TERM 1042 1035287 - 1035273 - f 93 -11.4 -4.25074 | opp_overlap 1035273 TATCAAATTGTAAAA GGTGGC ACT GCCACC TTTCTTCTTATTTTA TERM 1043 1035273 - 1035287 + F 95 -11.4 -4.66418 | opp_overlap 1035273 TATCAAATTGTAAAA GGTGGC ACT GCCACC TTTCTTCTTATTTTA MADE_00989 1035328 - 1035873 + | dTDP-4-keto-6-deoxy-D-glucose-3,6-epimerase MADE_00990 1035898 - 1036764 + | dTDP-4-dehydrorhamnose reductase TERM 1044 1036769 - 1036753 - f 80 -10.1 -3.62275 | ATGGACGAGCTTAAA GCGGCTC AAT AAGCCGC AACACTCAATTCAAG TERM 1045 1037021 - 1037003 - g 91 -11 -4.32046 | TGCTGAAAAAGTAAA GCGCGTGT TCA ACACGCAC CGGCCAGATATCATT TERM 1046 1037611 - 1037631 + G 83 -9.1 -4.19704 | opp_overlap 1037610, overlap 1037613 AACAAAACATTGAAG TGGTGCAAA CTA TTTGCACTA TTTTGGATGAAGTTA TERM 1047 1037613 - 1037629 + G 79 -9.5 -3.69483 | opp_overlap 1037610, overlap 1037611 CAAAACATTGAAGTG GTGCAAA CTA TTTGCAC TATTTTGGATGAAGT MADE_00991 1036800 - 1037882 + | dTDP-glucose 4,6 dehydratase TERM 1048 1037904 - 1037930 + F 100 -15.2 -5.79595 | overlap 1037901 CTTATTAGTTTTTAG GCCTCAGCTTAC TTA GTATGCTGAGGC TTTTTTGTTTTCGAA TERM 1049 1038341 - 1038326 - g 85 -5.4 -5.29445 | GCTGAATAACAAAAA GTCTCC AATT GAAGAC AAAGAGATTTCTGAG MADE_00992 1038180 - 1039367 + | nucleotide sugar dehydrogenase MADE_00993 1039557 - 1039997 + | transposase TERM 1050 1040079 - 1040102 + T 70 -8.2 -3.68827 | opp_overlap 1040079, overlap 1040082 GTCATAAAAACAAAA TAAGGCCTGT AAAA ACAGACCTTA TTTACGTGCTGAATA TERM 1051 1040102 - 1040079 - T 100 -10.4 -5.35224 | opp_overlap 1040079 1040082 GTCATAAAAACAAAA TAAGGCCTGT AAAA ACAGACCTTA TTTACGTGCTGAATA MADE_00994 1040522 - 1040124 - | DNA-binding protein, H-NS family TERM 1052 1040603 - 1040589 - R 100 -11.4 -6.26417 | opp_overlap 1040589 TAGCACAAAAAAAAA GCGAGC TAC GCTCGC TTTTAAAAAATATCC TERM 1053 1040589 - 1040603 + r 90 -11.4 -4.10657 | opp_overlap 1040589 TAGCACAAAAAAAAA GCGAGC TAC GCTCGC TTTTAAAAAATATCC MADE_00995 1042279 - 1040645 - | electron transfer flavoprotein-ubiquinone oxidoreductase MADE_00996 1042666 - 1043418 + | electron transfer flavoprotein, beta subunit MADE_00997 1043415 - 1044341 + | electron transfer flavoprotein, alpha subunit TERM 1054 1044383 - 1044366 - T 80 -11.3 -2.85813 | opp_overlap 1044366, overlap 1044363 1044361 ATTGTAACAATATGA GGCTGCA TTTT TGCAGCC TTTTTTTTGGGCGTT TERM 1055 1044366 - 1044383 + T 100 -11.3 -5.77853 | opp_overlap 1044366 1044363 1044361 ATTGTAACAATATGA GGCTGCA TTTT TGCAGCC TTTTTTTTGGGCGTT MADE_00998 1044725 - 1044417 - | isoamylase protein-like protein TERM 1056 1044861 - 1044850 - H 75 -3 -5.32565 | opp_overlap 1044850 TAATCAACGAAAAAA TGAT AATT ATCA ATCTTACTTTGTATT TERM 1057 1045131 - 1045154 + G 79 -12.6 -2.77701 | opp_overlap 1045137, overlap 1045128 1045137 AAAACTCCATGTTAA TGAAAAGTGG ATTG CCACTTTTCA TCGTGTTAATCGCGT TERM 1058 1045148 - 1045137 - g 72 -5.8 -4.42238 | opp_overlap 1045137 1045131 1045128 CCATGTTAATGAAAA GTGG ATTG CCAC TTTTCATCGTGTTAA MADE_00999 1045124 - 1046356 + | Membrane-fusion protein TERM 1059 1046349 - 1046337 - f 72 -9.1 -3.34267 | overlap 1046335 AAGTGGAAAGCAATA CCTCC GAA GGAGG CCGTTAATGAGCCGG TERM 1060 1047954 - 1047979 + G 72 -6.1 -4.26076 | opp_overlap 1047960, overlap 1047955 TCTCGCTAAAGCGGT ACGCAATCGTT ATAC GACGGTTGCGG TTTTCATGGCGATGC TERM 1061 1047955 - 1047978 + G 71 -9.6 -3.15324 | opp_overlap 1047960, overlap 1047954 CTCGCTAAAGCGGTA CGCAATCGTT ATAC GACGGTTGCG GTTTTCATGGCGATG MADE_01000 1046356 - 1049490 + | RND family efflux transporter TERM 1062 1049499 - 1049516 + F 93 -8.4 -5.18726 | opp_overlap 1049499 AAGCTAAGTAGAGAA TGCCGG GTAACA CCGGCA TTTTTCTTATAAGGA TERM 1063 1049516 - 1049499 - f 72 -8.4 -3.61062 | opp_overlap 1049499 AAGCTAAGTAGAGAA TGCCGG GTAACA CCGGCA TTTTTCTTATAAGGA MADE_01001 1049538 - 1051697 + | Prolyl endopeptidase TERM 1064 1051741 - 1051724 - f 90 -11.3 -4.10552 | opp_overlap 1051724 CGTCACTAAACGAAA GCCGCTT GTTA AAGCGGC TTTTTTTGTTTGCAT TERM 1065 1051724 - 1051741 + F 100 -11.3 -5.96894 | opp_overlap 1051724 CGTCACTAAACGAAA GCCGCTT GTTA AAGCGGC TTTTTTTGTTTGCAT MADE_01002 1051846 - 1052208 + | hypothetical protein TERM 1066 1052224 - 1052249 + T 90 -10.5 -4.4767 | opp_overlap 1052224 AATGGCATAAAAAAA GCAGAAACGTT TTTC AACGCTTCTGC TTTTATACTAAATAA TERM 1067 1052249 - 1052224 - T 100 -12.7 -5.63504 | opp_overlap 1052224 AATGGCATAAAAAAA GCAGAAACGTT TTTC AACGCTTCTGC TTTTATACTAAATAA MADE_01003 1054583 - 1052307 - | TonB-dependent receptor MADE_01004 1055837 - 1054848 - | Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain TERM 1068 1055108 - 1055130 + g 76 -4 -4.99035 | overlap 1055111 TCTTGGCTAATTCTG CAAGCGTGGT TTT GCTGCGCATG TTTTTCTCTAAATAC TERM 1069 1056646 - 1056661 + G 72 -6.2 -4.24204 | GGTGGTCCTGCAGGC GTGAAA GGTA TTTCAC TTTTCGCTGTACCTA MADE_01005 1055947 - 1057782 + | Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region TERM 1070 1058601 - 1058613 + G 71 -7.7 -3.85698 | TGCCTGGTTATGTAG CGATG AAT CATCG TTTATGACGGGCCAG MADE_01006 1057894 - 1058661 + | short-chain alcohol dehydrogenase-like protein MADE_01007 1058817 - 1059578 + | short-chain alcohol dehydrogenase-like protein TERM 1071 1059663 - 1059686 + F 100 -12.4 -4.36903 | opp_overlap 1059667 AGATATACTTTTTAA GGCAGCTAGG CGTA CCAAGCTGCC TTTATCTTTGGTGGC MADE_01008 1059712 - 1060062 + | hypothetical protein TERM 1072 1060098 - 1060143 + T 93 -11.4 -4.24384 | opp_overlap 1060098, overlap 1060091 TTTCGCCTCTAATGA TGGGGTCAGAGTACTTTT ACATTGACAA AAATGTACTCTGACTCCA TTTGGTTTTAGTAAT MADE_01009 1062323 - 1060158 - | hypothetical protein TERM 1073 1061010 - 1061020 + g 81 -8.2 -4.41348 | overlap 1060998 1060994 GAAGCGGCGCTCTAT GCGC TCT GCGC TTTCTTTAAGACGAA TERM 1074 1061691 - 1061662 - G 79 -7.9 -4.43283 | gap 1, opp_overlap 1061665, overlap 1061665 CGATAGAAAGAGAAA TCACCGG-TGTGGC GAG GCCACATCCAGTTA TCTACATCGCCGCCG TERM 1075 1061688 - 1061665 - G 71 -9.6 -3.16835 | gap 1, opp_overlap 1061665, overlap 1061662 TAGAAAGAGAAATCA CCGG-TGTGGC GAG GCCACATCCAG TTATCTACATCGCCG TERM 1076 1062458 - 1062446 - R 74 -4.8 -4.72272 | TTGCCCTATGAAAAA GCAC CGGGC GTGC AACACAAATTTGTTA TERM 1077 1062573 - 1062554 - R 100 -12.2 -5.8901 | opp_overlap 1062554 AGACAAAACAAAAAA GGCAGAGT TTAA ACTCTGCC TTCTGAATTTTTAAA TERM 1078 1062554 - 1062573 + r 89 -12.2 -3.5616 | opp_overlap 1062554 AGACAAAACAAAAAA GGCAGAGT TTAA ACTCTGCC TTCTGAATTTTTAAA MADE_01010 1063794 - 1062604 - | aspartate aminotransferase MADE_01011 1064724 - 1063942 - | hypothetical protein TERM 1079 1064137 - 1064114 - G 73 -9.6 -3.35679 | gap 1, opp_overlap 1064133 TTCTCCCATTCATAA CCTAC-ACCCG TGT CGGGTAGCAGG GCATCCTCTGCTTTA TERM 1080 1064133 - 1064148 + g 80 -6.8 -4.72007 | opp_overlap 1064114 CACCCGTGTCGGGTA GCAGGG CATC CTCTGC TTTATTTTCGTGGCG TERM 1081 1064422 - 1064446 + g 73 -4.2 -4.86731 | opp_overlap 1064411, overlap 1064413 1064411 1064410 TAAATATGCTGACTG CTCGGCATAA TCTTT TTGGGCCGGG TTTTGTTTAAGCCAA TERM 1082 1064730 - 1064718 - G 76 -4.1 -4.99043 | TTGCGATAAATAAAA TACAC ATA GCGTA CCTAGTGTCCTTTTC TERM 1083 1065213 - 1065203 - g 95 -3.2 -5.96521 | ATTAATCAAAAAAAA GCCA TTT TAGC GGTAGCACCGCATAC TERM 1084 1065460 - 1065484 + G 77 -9.3 -3.9777 | AGAAGGCACTCGTAG CCCCATTTATC CAT GGAAAATGGGG TTTATGCATATTGCA MADE_01012 1065038 - 1065673 + | Acyltransferase family protein TERM 1085 1066544 - 1066532 - g 78 -4.8 -5.00388 | CAAATTAAAAAGAAA GGTC TGCGC GACC TAGGTGCTACATTAG MADE_01013 1065815 - 1067011 + | Cystathionine gamma-synthase TERM 1086 1067037 - 1067064 + T 83 -12.8 -2.73159 | opp_overlap 1067038 1067044, overlap 1067044 1067063 GCTATGTTAAAGTAC AGAAAAAGGGGC GAAA GCCCCTTTTTCA ATTTAAGCAAGTTGC TERM 1087 1067063 - 1067038 - T 100 -16.3 -3.01497 | opp_overlap 1067037 1067044, overlap 1067044 CTATGTTAAAGTACA GAAAAAGGGGC GAAA GCCCCTTTTTC AATTTAAGCAAGTTG TERM 1088 1067057 - 1067044 - T 93 -9.5 -5.06585 | opp_overlap 1067037 1067044, overlap 1067038 TAAAGTACAGAAAAA GGGGC GAAA GCCCC TTTTTCAATTTAAGC TERM 1089 1067044 - 1067057 + T 93 -9.5 -4.81249 | opp_overlap 1067044 1067038, overlap 1067037 TAAAGTACAGAAAAA GGGGC GAAA GCCCC TTTTTCAATTTAAGC MADE_01014 1069580 - 1067121 - | hypothetical protein TERM 1090 1068320 - 1068337 + g 74 -3.3 -4.91459 | CTAGTGATAGTACAC CCGTTTC GATA GCAGCGG TTTTTGTGCCTGTTG TERM 1091 1069698 - 1069726 + H 91 -11.9 -3.98107 | opp_overlap 1069700, overlap 1069691 ATGTTTACATGTCAA GACTTTGTTCTAT TAA ATAGAACAAAGCC TTCTTAATTTTGATA TERM 1092 1069724 - 1069700 - H 91 -13.1 -3.07962 | opp_overlap 1069698 1069691 GTTTACATGTCAAGA CTTTGTTCTAT TAA ATAGAACAAAG CCTTCTTAATTTTGA MADE_01015 1069807 - 1070409 + | (Acyl-carrier protein) phosphodiesterase MADE_01016 1070962 - 1070459 - | hypothetical protein TERM 1093 1070493 - 1070513 + g 100 -18.3 -5.63517 | TGAGTGTGCTTGATT GCCCCGCGT ATT ACGCGGGGC TTTTTTGTTTGCCCA TERM 1094 1070582 - 1070562 - G 70 -4.7 -4.42806 | overlap 1070571 TCAGGTTGAAAGAAA CCTGAATCA CCC TGACTGAGG GGAAGATAATCCGAA MADE_01017 1071033 - 1071149 + | hypothetical protein MADE_01018 1071223 - 1071573 + | hypothetical protein MADE_01019 1071717 - 1071950 + | hypothetical protein TERM 1095 1072099 - 1072113 + G 79 -11.4 -3.41693 | GAATCTCAACTTGTA CGGCCA CAA TGGCCG TTGGTTAATGGTGGA MADE_01020 1072082 - 1073404 + | metallo-beta-lactamase family protein TERM 1096 1075605 - 1075630 + G 79 -3.2 -5.28176 | opp_overlap 1075594 1075593 AGACGGGCGACTCGC CTACGGCTCT ACAAGC GGGGCTGTGG TTTTTTCTCCGTCAC TERM 1097 1076605 - 1076622 + G 71 -7.7 -3.87815 | opp_overlap 1076605 1076607 GCTCGTCACAATAAG CATCGCG TAGC CGTGATG TTTGTAGACCTAGAC MADE_01021 1073617 - 1077795 + | sensory box/GGDEF/EAL domain protein TERM 1098 1077887 - 1077874 - f 79 -9.5 -3.69699 | opp_overlap 1077873 1077870, overlap 1077870 AGAAAACTAAATTAA GGGGC TCAA GCCCC GTCATTCGTCGCATA MADE_01022 1078015 - 1079694 + | AMP-binding protein TERM 1099 1079748 - 1079730 - T 100 -13.2 -4.80882 | opp_overlap 1079730 AGTTCATAGTAAAAA GCTCTGCA ACT TGCAGAGC TTTTTTACATATAAG TERM 1100 1079730 - 1079748 + T 100 -13.2 -5.1287 | opp_overlap 1079730 AGTTCATAGTAAAAA GCTCTGCA ACT TGCAGAGC TTTTTTACATATAAG MADE_01023 1079917 - 1079780 - | hypothetical protein MADE_01024 1080539 - 1079886 - | Leucyl/phenylalanyl-tRNA--protein transferase MADE_01025 1080697 - 1080539 - | hypothetical protein TERM 1101 1080706 - 1080723 + H 90 -4.1 -6.00814 | overlap 1080708 GCACCATGGTGCAAC TGTGACC TATT GGTCATG TTTTTTTTGCTTCTT TERM 1102 1080708 - 1080721 + H 79 -6.7 -4.61485 | overlap 1080706 ACCATGGTGCAACTG TGACC TATT GGTCA TGTTTTTTTTGCTTC TERM 1103 1080883 - 1080919 + H 93 -7.3 -5.40474 | AGACCGTAAACCTTA CCCATACAGATTTTTCG TGT CCTGAGGTCTGTATGGG TTTTTTTACAACGGT MADE_01026 1080950 - 1081084 + | hypothetical protein TERM 1104 1083252 - 1083233 - g 75 -10 -3.53224 | opp_overlap 1083233 GAGTTTCCTCGTAAA TCAAGCCC GTTA GGGCTCGA TTTAATGGCAAGTGA MADE_01027 1081202 - 1084822 + | exodeoxyribonuclease V, gamma subunit TERM 1105 1087093 - 1087075 - g 72 -5.2 -4.58283 | GAAGTGCTGGAAAAA GCCAGTAC CAC GCACCAGC GACCCGAACAGCTAC TERM 1106 1087499 - 1087484 - g 95 -7.5 -5.37865 | opp_overlap 1087492 CTAATAACGAAAAAA GCGCG CTGGCC CGCGC CTTGGGCTTGAGTGG TERM 1107 1088162 - 1088178 + G 74 -3.6 -5.09259 | opp_overlap 1088162 TGACGTTAGAGCAAA CTCTGC GCGAG GCTGAG TTTTATTTTCCAATG MADE_01028 1084819 - 1088829 + | exodeoxyribonuclease V, beta subunit TERM 1108 1089036 - 1089048 + G 72 -4.7 -4.56597 | opp_overlap 1089032 1089030, overlap 1089032 TATTTGAAAGACGTG GCGGG AAC CACGC TTTTTGAAGACGCGG TERM 1109 1090107 - 1090090 - g 78 -5.5 -4.75308 | opp_overlap 1090102, overlap 1090102 ATGAACAGGCAAAAA GCTACGT AGCA ACGTTGC AAGCGCCGCAACGCT MADE_01029 1088838 - 1091033 + | exodeoxyribonuclease V, alpha subunit TERM 1110 1091020 - 1091066 + T 93 -13.2 -3.34242 | gap 1, opp_overlap 1091025, overlap 1091025 TAAGCCGATGCGCTG AAAAAGTACTCTGACC-CCCC AACTCG GGGGAGGGCAGAGTACTTTTC TTGATGATTATTCTA TERM 1111 1091061 - 1091025 - T 100 -14.5 -4.57569 | opp_overlap 1091020 1091025 CGATGCGCTGAAAAA GTACTCTGACCCCCC AACTCGG GGGAGGGCAGAGTAC TTTTCTTGATGATTA TERM 1112 1091025 - 1091061 + T 100 -13.1 -4.75219 | gap 1, opp_overlap 1091025, overlap 1091020 CGATGCGCTGAAAAA GTACTCTGACC-CCCC AACTCG GGGGAGGGCAGAGTAC TTTTCTTGATGATTA MADE_01030 1091481 - 1091074 - | hypothetical protein TERM 1113 1091105 - 1091126 + g 80 -7.3 -4.56736 | overlap 1091121 AATAGACAAAGGCCG CGCTTGTTG ATAT CAATAGGCG TTTTGCTTATTAAAT TERM 1114 1091639 - 1091629 - H 71 -4 -4.88895 | AAATAAAGAAATAAA TACT GAG AGTA ATAGTGACAGAATCC MADE_01031 1091664 - 1091960 + | hypothetical protein MADE_01032 1092992 - 1092120 - | Transporter involved in threonine and homoserine efflux TERM 1115 1092365 - 1092351 - G 75 -6.4 -4.38171 | overlap 1092353 TATAGCAGATGAAAA TATGCC TAC GGCACA GCCAATCAACACCGC TERM 1116 1092545 - 1092529 - G 74 -5.8 -4.57073 | TAGCCTGCCCAAAAA GCGCCT GCCGT AAGCGC CAAAAGCACGCCGAG TERM 1117 1092796 - 1092786 - G 83 -4.6 -5.40474 | AGCGCCGTAAAAAAA GACG TTT CGCC AACCTTTTGCGCTTA MADE_01033 1093270 - 1093383 + | hypothetical protein MADE_01034 1093657 - 1093884 + | hypothetical protein TERM 1118 1093886 - 1093906 + T 78 -7.5 -4.42851 | opp_overlap 1093885, overlap 1093888 ATAAAAACAGTTAAC CCGGTCGAA TTG TTCGGCCAG TTTTCGCTTTATTCA TERM 1119 1093931 - 1093948 + T 100 -12.7 -5.09426 | opp_overlap 1093931 TATTCAAACAAAAAA CCGGCGT AAAA ACGCCGG TTTTTTCAGGTTACG TERM 1120 1093948 - 1093931 - T 100 -12.7 -5.65927 | opp_overlap 1093931 TATTCAAACAAAAAA CCGGCGT AAAA ACGCCGG TTTTTTCAGGTTACG MADE_01035 1096818 - 1093978 - | TonB-dependent receptor TERM 1121 1094226 - 1094243 + g 76 -8.4 -4.15508 | TGTCGTAAAGGCTCG CGCGCT CAATGT AGCGCG TTTTCCAGCTTGCTT TERM 1122 1095774 - 1095742 - G 85 -6.2 -5.24796 | gap 1, opp_overlap 1095764 1095765, overlap 1095764 GCTATAGAAGAAAAA CGCTGGCTGCGCCAT TGAG ATAGCGC-GCGTGCG GGCGTATTTTGCCTG TERM 1123 1097093 - 1097108 + r 76 -7.6 -4.2109 | AGCATTGTTTTAATG TTGACC AGGC GGTCAA TTTGTATCTCTATTG TERM 1124 1097440 - 1097422 - R 91 -10.3 -4.59982 | opp_overlap 1097420, overlap 1097389 TCACAACTAAATAAA TGCCCAC GTAAA GTGGGCA AGTTGCGTAAATAAT MADE_01036 1098569 - 1097529 - | 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase TERM 1125 1098670 - 1098696 + r 70 -8.8 -3.30635 | opp_overlap 1098670 TGAACGCGTTGAACA TTGCAATTCGTA AGT TGCGAATTGCCA TTGTCAGAGAATTTA MADE_01037 1099698 - 1098709 - | hypothetical protein TERM 1126 1098838 - 1098853 + g 82 -5.4 -5.15969 | overlap 1098840 GTAGACGATGCGTGT TAGCGA GTGA TCGCTG TTTTTTAAGTTAGGC MADE_01038 1100233 - 1099970 - | hypothetical protein TERM 1127 1101161 - 1101136 - g 71 -9.7 -3.20164 | opp_overlap 1101135 TTAGATGCAATTGAA GCAGCGGTAAC TGAA GATACCACTGC GGTTTACGTGTGCAA MADE_01039 1100605 - 1101786 + | histidinol-phosphate aminotransferase TERM 1128 1101841 - 1101817 - T 100 -12.9 -5.26316 | opp_overlap 1101817 CTAGCGCAGAAAAAA GGCTGAGCACA AAT TGTGTTCAGCC TTTTTTTAAAATCTC TERM 1129 1101817 - 1101841 + T 100 -15.1 -5.45726 | opp_overlap 1101817 CTAGCGCAGAAAAAA GGCTGAGCACA AAT TGTGTTCAGCC TTTTTTTAAAATCTC MADE_01040 1103188 - 1102013 - | Saccharopine dehydrogenase MADE_01041 1104556 - 1103324 - | probable aspartate aminotransferase TERM 1130 1103962 - 1103951 - G 80 -5.8 -5.00339 | opp_overlap 1103951 ATCAACAATTAAAAA GCCA CCCT TGGC TTTGCAGTATTGTCC MADE_01042 1104736 - 1107183 + | predicted extracellular metal-dependent peptidase TERM 1131 1107273 - 1107251 - g 76 -12 -2.73203 | opp_overlap 1107252, overlap 1107250 1107247 1107246 CGAGTAACAAGCAAG TGCCGCAAAG AAC CTTTGCGGCT TTGATCACTCCCTTA TERM 1132 1107252 - 1107272 + G 100 -15.5 -3.76968 | opp_overlap 1107251 1107250 1107247 1107246 GAGTAACAAGCAAGT GCCGCAAAG AAC CTTTGCGGC TTTGATCACTCCCTT TERM 1133 1107430 - 1107445 + G 89 -9 -4.56597 | CTCATAGCGCTTTGC GCAGGT GTGT ACCTGC TTTTTACGCAGCACG MADE_01043 1107199 - 1107855 + | hypothetical protein MADE_01044 1108457 - 1108251 - | Antitoxin of toxin-antitoxin stability system, StbD family protein MADE_01045 1109976 - 1108858 - | Succinylglutamate desuccinylase/aspartoacylase TERM 1134 1109015 - 1109025 + g 70 -2.4 -5.07107 | TTTAAAATTTGCGCC AGCG GTT CGCC TTTTTTAACGCTTTG TERM 1135 1109073 - 1109090 + g 74 -5.5 -4.60713 | ATTCCACCATGCCAC CCCAGTT GGTG AACAGGG TTTTATAGTCTTTTA MADE_01046 1110838 - 1110068 - | molybdopterin biosynthesis protein MoeB TERM 1136 1110594 - 1110612 + g 83 -10.4 -3.75332 | TTATTTACCCCGACA TCTTGTTC GCT GAACAAGA TTTGCCTTGGAAGGT MADE_01047 1110963 - 1111469 + | molybdenum cofactor biosynthesis protein B TERM 1137 1111924 - 1111910 - g 85 -5.6 -5.36441 | overlap 1111912 1111920 GTGCTAGAGAAAAAA GGCGGT AAA ACCGGC CACTGGCAATCTGAT MADE_01048 1111466 - 1111954 + | molybdenum cofactor biosynthesis protein C MADE_01049 1112041 - 1112289 + | molybdopterin converting factor, small subunit MADE_01050 1112292 - 1112765 + | putative molybdenum cofactor biosynthesisprotein E TERM 1138 1112922 - 1112901 - g 86 -11.6 -3.63515 | TGGTAGTTTTAACAA GCGCTAGC GCCGTT GCTAGCGC TACAGAAACGGCCAG MADE_01051 1112765 - 1114153 + | molybdate-binding periplasmic protein precursor MADE_01052 1114150 - 1114890 + | molybdenum ABC transporter, permease protein TERM 1139 1115593 - 1115581 - g 72 -6.3 -4.19953 | TACGCAAGTTGAAAA TATGC ACG GCATA GCCCGAGTTATGGTT MADE_01053 1114892 - 1116037 + | molybdenum ABC transporter, ATP-binding protein MADE_01054 1117400 - 1116024 - | coproporphyrinogen III oxidase TERM 1140 1117063 - 1117051 - G 74 -3.3 -5.09225 | overlap 1117052 1117053 ACTTTATTTAAAAAA CTGGG CGA CCCAC CGCCTAAATGCAGCG MADE_01055 1117581 - 1118234 + | hypothetical protein MADE_01056 1118371 - 1119006 + | probable DSBA oxidoreductase TERM 1141 1119982 - 1119994 + G 74 -5.5 -4.56597 | opp_overlap 1119982 TTGTCTGTGATAGCA CAGTG CCA CGCTG TTTTTCACACGAAAC MADE_01057 1119037 - 1120029 + | putative xanthine dehydrogenase accessory factor MADE_01058 1122608 - 1120026 - | TonB-dependent receptor MADE_01059 1122953 - 1122828 - | hypothetical protein MADE_01060 1122961 - 1123629 + | Phosphoglycerate/bisphosphoglycerate mutase TERM 1142 1123816 - 1123804 - g 76 -9.1 -3.74224 | overlap 1123812 CTGAAATGATGCAAA CGCTG AAA CAGCG TGCCAAAGACGCCGG TERM 1143 1123817 - 1123840 + G 88 -8.2 -4.85782 | opp_overlap 1123812, overlap 1123819 AACGCTGAAACAGCG TGCCAAAGAC GCCG GTCTTTGGAA TTTGTTTTTACCAGA TERM 1144 1123819 - 1123838 + G 71 -10.8 -2.69725 | opp_overlap 1123812, overlap 1123817 CGCTGAAACAGCGTG CCAAAGAC GCCG GTCTTTGG AATTTGTTTTTACCA MADE_01061 1123641 - 1124876 + | putative acyl-CoA dehydrogenase TERM 1145 1125064 - 1125024 - g 71 -9.7 -3.18199 | opp_overlap 1125024, overlap 1125012 1125034 CAACGTTTAAGTTAA CGACGGATAACGGCGTA TATGTAC TACGCCGTCAACCTCCG GGCAAACTGTTAAAA TERM 1146 1125752 - 1125730 - g 74 -7.1 -4.23529 | gap 1, opp_overlap 1125732, overlap 1125724 ACAGGAATACATAAA TACCTACTGC CAGC GCAG-AGGTA TTGACGCTATCGATA MADE_01062 1124879 - 1125937 + | aminoglycoside phosphotransferase MADE_01063 1126012 - 1126986 + | Zinc-containing alcohol dehydrogenase superfamily protein TERM 1147 1127108 - 1127083 - T 95 -12 -4.57474 | opp_overlap 1127083 TTAATCTATAGAAAA GCCTAAACAC GACAGT GTGTTTAGGC TTTTTTGAACGTATC TERM 1148 1127083 - 1127108 + T 100 -12.7 -5.04385 | opp_overlap 1127083 TTAATCTATAGAAAA GCCTAAACACG ACAG TGTGTTTAGGC TTTTTTGAACGTATC MADE_01064 1127328 - 1127161 - | hypothetical protein MADE_01065 1128130 - 1127597 - | SEC-C motif domain protein MADE_01066 1128661 - 1128251 - | deoxyguanosinetriphosphate triphosphohydrolase-like protein MADE_01067 1128966 - 1129364 + | membrane protein-like protein MADE_01068 1130066 - 1129389 - | Ferric reductase-like transmembrane component MADE_01069 1131182 - 1130175 - | oxidoreductase, molybdopterin binding TERM 1149 1131347 - 1131332 - R 78 -3.9 -5.34555 | CGAGATTATAAAAAA GACCG AAGCAG CGGCC TTTTCATTTCAAAAA TERM 1150 1131386 - 1131373 - R 77 -5.3 -4.98758 | overlap 1131377 AAAAATTTATAAAAA GTAAG CTAG CTTAC ATGTGCAAACTATCT MADE_01070 1132726 - 1131383 - | deoxyguanosinetriphosphate triphosphohydrolase-like protein MADE_01071 1133405 - 1132806 - | metal dependent phosphohydrolase TERM 1151 1133221 - 1133207 - G 78 -6.4 -4.61633 | overlap 1133209 ACACATCGTGAAAAA TCGCCA TGG TGGCAA TACGATCAGGGTTTA MADE_01072 1134627 - 1133407 - | aminotransferase, class I TERM 1152 1135433 - 1135447 + G 72 -6.4 -4.25283 | opp_overlap 1135433, overlap 1135426 CTTTACATTAGCAAT GCTGTT CAT AACGGC TTTTACTCAACCAAT MADE_01073 1134900 - 1135694 + | putative cytochrome c oxidase, subunit I TERM 1153 1135784 - 1135799 + F 88 -8.2 -5.05228 | AAATTACAGTTTTGA GGCTCC GATA GGGGCC TTTTTATACTTTAGT TERM 1154 1136204 - 1136215 + G 74 -5.8 -4.57837 | opp_overlap 1136204 1136203 TTTTGTTGGTGAAAC CCAG TTCG CTGG TTTTTGCAAAGCTAT MADE_01074 1136094 - 1136423 + | hypothetical protein MADE_01075 1139608 - 1136528 - | AcrB/AcrD/AcrF family protein TERM 1155 1136669 - 1136643 - G 70 -5.2 -4.48713 | overlap 1136644 1136645 1136667 GGTACTAAGAATAAA CTGGTTAATGTT GAA AACACTAACCCA CCTATGATGGCAATG MADE_01076 1142973 - 1139605 - | AcrB/AcrD/AcrF family protein TERM 1156 1141587 - 1141572 - G 80 -6.8 -4.63592 | overlap 1141582 CCTCAACAAAAATAA GCGGTA CAAA CACCGC CATGGTGGTAAGGGT MADE_01077 1144128 - 1142998 - | HlyD family secretion protein TERM 1157 1143119 - 1143132 + g 81 -5.3 -5.22039 | TTATTTTCAAAGCCG GTAGA AATA TCTAC TTTTTTCACTTTGCC TERM 1158 1144283 - 1144265 - R 95 -8.9 -5.42514 | opp_overlap 1144265 GCACAAACGAAAAAA GCTAACC GATAG GGTTAGC TTTTTATACTAATGC TERM 1159 1144265 - 1144283 + r 90 -8.9 -4.93296 | opp_overlap 1144265 GCACAAACGAAAAAA GCTAACC GATAG GGTTAGC TTTTTATACTAATGC MADE_01078 1144776 - 1144342 - | putative inner membrane protein MADE_01079 1145725 - 1144808 - | hypothetical protein TERM 1160 1144865 - 1144877 + g 82 -6.9 -4.83169 | CTTTTGCTTGTACAG GGCGC CCA GTGCC TTTTTGTAGGCCGCT MADE_01080 1145758 - 1146495 + | LamB/YcsF family protein MADE_01081 1146552 - 1147286 + | Allophanate hydrolase, subunit 1 TERM 1161 1147395 - 1147410 + GF 73 -7.6 -4.06055 | overlap 1147369 CCAAGCTTATCATTG GGCTAA TTTT TTAGCC TTTAATTTAGACGGT MADE_01082 1147240 - 1148223 + | putative carboxylase MADE_01083 1148220 - 1149086 + | D-alanine transaminase TERM 1162 1149119 - 1149100 - T 93 -9.2 -5.30686 | opp_overlap 1149100 AATACCTACAAAAAA GCCCGCTT AATA ATGCGGGC TTTAGCACAGTAGCT TERM 1163 1149100 - 1149119 + T 74 -9.2 -3.54543 | opp_overlap 1149100 AATACCTACAAAAAA GCCCGCTT AATA ATGCGGGC TTTAGCACAGTAGCT MADE_01084 1149570 - 1149142 - | ferric uptake regulator TERM 1164 1150039 - 1150022 - g 79 -7.7 -4.50976 | TTGTAGAGCAGAAAA TGCCGGT GCAA ACCAGCA TGGTCAAGGTTAAAA MADE_01085 1149874 - 1151892 + | methyl-accepting chemotaxis protein TERM 1165 1152010 - 1151971 - T 77 -10.8 -2.75183 | opp_overlap 1151972 1151983, overlap 1151983 ATGCGCATTGAATTA CCCATAAAAAAACCGCTC AATT GAGCGGTTTTTTGAAGGT GTTAACGGGTCGAGC TERM 1166 1151972 - 1152009 + T 95 -14.3 -3.03124 | opp_overlap 1151971 1151983, overlap 1151983 TGCGCATTGAATTAC CCATAAAAAAACCGCTC AATT GAGCGGTTTTTTGAAGG TGTTAACGGGTCGAG TERM 1167 1151983 - 1151998 + T 93 -10.4 -5.04987 | opp_overlap 1151971 1151983, overlap 1151972 TTACCCATAAAAAAA CCGCTC AATT GAGCGG TTTTTTGAAGGTGTT TERM 1168 1151998 - 1151983 - T 100 -10.4 -5.64274 | opp_overlap 1151983 1151972, overlap 1151971 TTACCCATAAAAAAA CCGCTC AATT GAGCGG TTTTTTGAAGGTGTT MADE_01086 1152552 - 1152028 - | flavodoxin MADE_01087 1152797 - 1152579 - | hypothetical protein MADE_01088 1153614 - 1152922 - | hypothetical esterase/lipase ybfF TERM 1169 1153539 - 1153526 - G 73 -2.4 -5.21709 | TCTGACACTAAAAAA CCAT TGGTCC ATGG AGACTCGCCATGGTC MADE_01089 1153749 - 1153988 + | hypothetical protein TERM 1170 1155918 - 1155958 + F 90 -8.5 -5.0538 | opp_overlap 1155918 1155919, overlap 1155919 ACGTTGGACCCGAAA TCCTAATGAATATTTACTG TTT CAGTAAGCATTGATTAGGG TTTTTTACCCTGAGG TERM 1171 1155957 - 1155919 - f 71 -9.8 -2.75844 | opp_overlap 1155918 1155919, overlap 1155918 CGTTGGACCCGAAAT CCTAATGAATATTTACTG TTT CAGTAAGCATTGATTAGG GTTTTTTACCCTGAG TERM 1172 1155919 - 1155957 + F 79 -9.8 -3.62746 | opp_overlap 1155919 1155918, overlap 1155918 CGTTGGACCCGAAAT CCTAATGAATATTTACTG TTT CAGTAAGCATTGATTAGG GTTTTTTACCCTGAG TERM 1173 1156767 - 1156755 - f 85 -9.1 -4.2354 | GAAAGGCGAAAAGAA CCCCT GTG AGGGG AGTGAAATAGAACCT TERM 1174 1157558 - 1157540 - f 74 -8.9 -3.54743 | overlap 1157553 CATGAGTAACGATAA TGGGAGT GAAAA ACTCCCA CGCCGGAAGACCAAG TERM 1175 1159261 - 1159249 - f 71 -4.1 -4.87037 | overlap 1159240 AAGATAGAGTAAAAA GTAAG TTA CTCAC TGATTGAATTAATAT TERM 1176 1159529 - 1159544 + F 100 -11.8 -5.22039 | opp_overlap 1159529 TCCCATTAAGAAGAA CCCGCC TAAC GGCGGG TTTTTTGCGTTTGGC TERM 1177 1159544 - 1159529 - f 91 -11.8 -3.99374 | opp_overlap 1159529 TCCCATTAAGAAGAA CCCGCC TAAC GGCGGG TTTTTTGCGTTTGGC TERM 1178 1159832 - 1159820 - f 72 -3.3 -5.03314 | overlap 1159821 TGTAGTGTTAAAAAA TTGCC GTG GGCAG AGCTTTCGATAGACT MADE_01090 1159935 - 1160936 + | sensory box/GGDEF family protein MADE_01091 1161348 - 1160983 - | hypothetical protein MADE_01092 1164629 - 1161351 - | transcriptional regulator TERM 1179 1163609 - 1163621 + g 78 -4.7 -4.96773 | GGGAAACATCTATGT GAGCG CCG CGCCC TTTGTTTTTCATTAA TERM 1180 1164045 - 1164065 + g 100 -9.1 -5.14563 | opp_overlap 1164045 ACTAAGATGATCAGA GGCATAAAT ACC GTTTATGCC TTTTTTACTCAACAG TERM 1181 1164338 - 1164350 + g 72 -4.7 -4.64157 | opp_overlap 1164338 GTACTTCTGCAACAA CGCGG TAA CCACG TTTTCTGATTGTTTC MADE_01093 1164834 - 1165328 + | hypothetical protein TERM 1182 1165402 - 1165421 + F 83 -6.4 -5.00895 | ACGCTTAGCAAAAAA TGGCTGTC GAAT GATGGCCA TTTTTGTCTAATAAC MADE_01094 1165480 - 1166331 + | hypothetical protein TERM 1183 1166476 - 1166487 + G 71 -7.2 -4.18401 | ACAATTTCGTTAGTA CCGG GTTT CCGG TTTTAAAATCTATCG MADE_01095 1166328 - 1167092 + | hypothetical protein TERM 1184 1167429 - 1167452 + G 76 -5.3 -4.87803 | CAGTAGTGAAAACCG TACCTGACT ATCCAA AGCCAGGTA TTTTATTTAGAGATG TERM 1185 1167593 - 1167618 + G 75 -6.1 -4.38712 | TTCCTTTTTGGTGCG CCATTGGCCAT CGAA ATGGGCATTGG TTTTGTACCAGTAAG MADE_01096 1167392 - 1167928 + | adenine phosphoribosyltransferase TERM 1186 1168358 - 1168335 - g 74 -8.2 -3.85698 | opp_overlap 1168326 1168327 1168334 CGCGGGCGCTACAAA GTGTACCTTA TCGA TGAGGTACAC ATGCTTTCTAAACAT TERM 1187 1169692 - 1169676 - g 100 -4.3 -6.23545 | CTCAAACAAAAAAAA GCGCAAG ATG CTGACGC AAAAAGTAATAGTGC TERM 1188 1169831 - 1169801 - g 72 -6.7 -4.25256 | overlap 1169819 1169821 GGCTGATGAAAAGAA CAGCCCTGAGCCG ATTAA CAGCCCTGAGCCG ATTAACAGCCCTGAG MADE_01097 1167972 - 1170764 + | DNA polymerase III subunits gamma and tau TERM 1189 1171106 - 1171125 + G 74 -5.6 -4.62471 | overlap 1171088 GGAATGCCACTTCCC CCTGGCTT CAAA ATGCCGGG TTTTTAGACATTAAA MADE_01098 1170803 - 1171132 + | hypothetical protein TERM 1190 1171193 - 1171213 + F 89 -9 -4.71482 | opp_overlap 1171193 GTAAGTTCTTATAAA GCTCTGGT TCTAT ACCGGAGC TTTTTAACATTTGCT MADE_01099 1171624 - 1174092 + | bacteriophytochrome protein TERM 1191 1174367 - 1174315 - gf 76 -2.5 -5.32699 | gap 4, opp_overlap 1174326 1174335 1174340 TGAAATAGCAAAAAA CATCACAG-AA-AGGTA-TAAAGTGCC CGT GGTA-TTTAGTACCTCTTACTGTGATG ACACGACAATTTCTA TERM 1192 1175222 - 1175240 + GF 71 -6.6 -4.11371 | ACCGACGCTCTTACG GGTGCTGG GAA CCGGAACC TTTTGAACAGTATTG TERM 1193 1176143 - 1176163 + GF 73 -8.3 -3.75863 | ATTAAGGCTCTTGGC GTCATCGTT TCC ATCGATGAC TTTGGTACAGGTTTT MADE_01100 1174097 - 1176493 + | sensory box/GGDEF family protein MADE_01101 1176465 - 1176581 + | hypothetical protein MADE_01102 1176708 - 1177655 + | hypothetical protein MADE_01103 1177742 - 1178260 + | recombination protein RecR TERM 1194 1179825 - 1179809 - g 75 -10.9 -3.10343 | AGATTTACTATGTAA CTGCAGA CAG TCTGCAG GCCGCTAAATCTAGC MADE_01104 1178473 - 1180395 + | heat shock protein 90 TERM 1195 1180421 - 1180447 + F 79 -10.2 -3.52906 | opp_overlap 1180421 1180427, overlap 1180427 CCACAGTTTAATCAA TAAAAACGGGCG TAA TGCCCGTTTTTC TATTTATAAGGCTAA TERM 1196 1180447 - 1180421 - f 75 -9.5 -3.36785 | opp_overlap 1180421 1180427, overlap 1180427 CCACAGTTTAATCAA TAAAAACGGGC GTAAT GCCCGTTTTTC TATTTATAAGGCTAA TERM 1197 1180441 - 1180427 - f 93 -8.5 -5.1963 | opp_overlap 1180421 1180427, overlap 1180421 TTTAATCAATAAAAA CGGGC GTAAT GCCCG TTTTTCTATTTATAA TERM 1198 1180427 - 1180441 + F 93 -9.2 -5.24799 | opp_overlap 1180427 1180421, overlap 1180421 TTTAATCAATAAAAA CGGGCG TAA TGCCCG TTTTTCTATTTATAA MADE_01105 1180744 - 1181388 + | adenylate kinase(ATP-AMP transphosphorylase) TERM 1199 1181425 - 1181410 - f 74 -6 -4.40572 | opp_overlap 1181410, overlap 1181396 ACAACGTTTATAAAA GGTCGC TTGT GCGGCC TTTTTTGTTGCTTGT TERM 1200 1181410 - 1181425 + F 100 -8.2 -5.57396 | opp_overlap 1181396 1181410 ACAACGTTTATAAAA GGTCGC TTGT GCGGCC TTTTTTGTTGCTTGT MADE_01106 1181538 - 1181933 + | uncharacterized relative of glutathione S-transferase TERM 1201 1181972 - 1181988 + T 100 -10.1 -5.37345 | opp_overlap 1181972 CTTATAAAGAGATAA TGCCGGC TTA GCTGGCA TTTTTTATGGTTAAC TERM 1202 1181988 - 1181972 - T 73 -7.9 -3.80279 | opp_overlap 1181972 CTTATAAAGAGATAA TGCCGGC TTA GCTGGCA TTTTTTATGGTTAAC TERM 1203 1182178 - 1182222 + T 89 -9.4 -4.27686 | opp_overlap 1182185, overlap 1182185 CATTCAACAACACAA ATAAAAAGCCCTCGATGCAT ATTAA ATGCATTGAGGGCTTTGTCG TTTTAGCTACTTTTA TERM 1204 1182185 - 1182215 + T 100 -16.3 -4.21402 | opp_overlap 1182185, overlap 1182178 CAACACAAATAAAAA GCCCTCGATGCAT ATTAA ATGCATTGAGGGC TTTGTCGTTTTAGCT TERM 1205 1182215 - 1182185 - T 100 -14.1 -5.4659 | opp_overlap 1182185 1182178 CAACACAAATAAAAA GCCCTCGATGCAT ATTAA ATGCATTGAGGGC TTTGTCGTTTTAGCT MADE_01107 1184850 - 1182235 - | TonB-dependent receptor TERM 1206 1185139 - 1185153 + H 72 -4.3 -4.83169 | ATATTTAAGTTATCG TGTAG TACCT CTACA TTTTTATCCGCCGCT TERM 1207 1185163 - 1185178 + H 84 -10.4 -3.91908 | overlap 1185161 TCTACATTTTTATCC GCCGCT CAAC AGCGGC TATTTTTACAGATCT TERM 1208 1186139 - 1186112 - g 75 -2.6 -5.18355 | GTGAAAAACGAAAAA CGTCAACGCG TAGATAAT CGCGCCTACG GACACAACCAGTATG TERM 1209 1186361 - 1186345 - g 84 -8.1 -4.56597 | GTCTTGGGTTAAAAA GTATTTC GCT GAAATAC CGGCGGGAGAAACAA MADE_01108 1185581 - 1188445 + | peptidase, M16 family protein TERM 1210 1188516 - 1188488 - T 100 -17.6 -5.1356 | opp_overlap 1188478 1188476 TGCTATTAATAAAAA GGCCCGTATGAA AAGTG TTCATACGGGCC GTAGTAGCAATGTTG MADE_01109 1190767 - 1188536 - | methyl-accepting chemotaxis protein TERM 1211 1189874 - 1189890 + g 70 -9.5 -3.08471 | opp_overlap 1189877, overlap 1189877 AGTAGCGGCAACCAC TAAGCCA TTT TGGCTTA TTACATAAACTTCTG TERM 1212 1191535 - 1191547 + G 73 -4.1 -4.78237 | opp_overlap 1191523, overlap 1191523 CTACGCCGAATTCAG CGTTT CAG AAGCG TTTTCTTATGGCATA MADE_01110 1190984 - 1191844 + | putative transporter (formate/nitrite transporter family) protein TERM 1213 1191918 - 1191890 - T 70 -2.5 -5.01811 | gap 1 GCAGTAAATGAAAAA TGCCCTTA-CAC AAAGAA GCAATAAGGGCA TTTTCTAACACGGCT MADE_01111 1192566 - 1191949 - | phosphoribosyl-ATP pyrophosphatase/phosphoribosyl-AMP cyclohydrolase MADE_01112 1193375 - 1192563 - | imidazole glycerol phosphate synthase subunit HisF MADE_01113 1194094 - 1193357 - | phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase MADE_01114 1194723 - 1194094 - | imidazole glycerol phosphate synthase subunit HisH TERM 1214 1194125 - 1194143 + g 71 -10.2 -2.6176 | overlap 1194124 TTAGTCAGTAGTTGG GCTCCGGC TTC GCCAGAGC GTTCTGGGTGGAATT MADE_01115 1195793 - 1194723 - | imidazole glycerol-phosphate dehydratase/histidinol phosphatase TERM 1215 1195038 - 1195055 + g 74 -3.3 -5.03145 | opp_overlap 1195026 AAAGCGGCCAATACC GCGCTTG TCGC CTAGTGC TTTTTTAAGCGCTTC TERM 1216 1195422 - 1195439 + g 74 -8.5 -3.88291 | opp_overlap 1195421 1195417 AATTACAAATGAACG GGTAAAG TCGA CTTTACC TTTCTGCAAGTACTC TERM 1217 1195643 - 1195665 + g 72 -9.2 -3.53012 | overlap 1195640 TACTCACCATTACCA GCTTGAAGTC GCT GGCTTTAAGC TTTAGCAACACGGGA MADE_01116 1196869 - 1195790 - | histidinol-phosphate aminotransferase TERM 1218 1196026 - 1196047 + g 78 -6.6 -4.62471 | overlap 1196030 TACCGTCTAGCGCTT GAAGCGCT TCGGCT AGCGTTTC TTTTTCGCGGTTAAG TERM 1219 1196030 - 1196043 + g 71 -3.8 -4.86385 | overlap 1196026 GTCTAGCGCTTGAAG CGCT TCGGCT AGCG TTTCTTTTTCGCGGT MADE_01117 1198173 - 1196869 - | Histidinol dehydrogenase TERM 1220 1198117 - 1198134 + g 100 -9.1 -5.42265 | GCTATTGGCCATAGC CGGGCGT GCTA ACGCCTG TTTTTTCTCATTTAC MADE_01118 1199089 - 1198187 - | ATP phosphoribosyltransferase TERM 1221 1198701 - 1198711 + g 82 -5.4 -5.1925 | AGCAGGTATGGGTAG GTAG TTG CTAC TTTTTTACCTTCTAG TERM 1222 1199169 - 1199146 - H 100 -14.6 -5.0925 | opp_overlap 1199161 GCCTAAAACGAAAAA CCCCCGGAAG TTTC CTTCCGAGGG TCGAGAATTTTGCTA MADE_01119 1199491 - 1199736 + | hypothetical protein MADE_01120 1199934 - 1201652 + | iron-regulated outer membrane virulence protein MADE_01121 1202221 - 1201649 - | putative lipoprotein MADE_01122 1202631 - 1202386 - | Na(+)-translocating NADH-quinone reductase subunit B MADE_01123 1203325 - 1202780 - | hypothetical protein MADE_01124 1203414 - 1204322 + | hypothetical protein TERM 1223 1204831 - 1204817 - g 82 -11.4 -3.56837 | TGCCAAAGATTATAA GGGCGA CTT TCGCCC GTCACCCTGGTGGGA MADE_01125 1204407 - 1205711 + | alpha-amylase, putative TERM 1224 1205801 - 1205779 - f 76 -2 -5.39755 | opp_overlap 1205783, overlap 1205783 CAGAACTACAAAAAA CAAAGCAATA CAA TCTTGCTTCA TTTAACAAGTTCTAT TERM 1225 1205797 - 1205783 - f 70 -2.8 -5.1471 | opp_overlap 1205783, overlap 1205779 ACTACAAAAAACAAA GCAATA CAA TCTTGC TTCATTTAACAAGTT MADE_01126 1205830 - 1206048 + | putative orphan protein TERM 1226 1206378 - 1206342 - g 73 -9.5 -3.37796 | overlap 1206375 GCCGACTATGTAGAA GAGTTTTGTGTCTTTGC TAA GCAAAAACTCAAAGCCC ATCATGGCCACTGTT MADE_01127 1206288 - 1206581 + | putative orphan protein MADE_01128 1207298 - 1206696 - | hypothetical protein TERM 1227 1207108 - 1207093 - G 86 -4.6 -5.46657 | opp_overlap 1207091 1207093 GATTTCAACAAAAAA CGCTGA AGTT TCGGCG TGTTCGTTAGTTTTG TERM 1228 1207413 - 1207400 - R 79 -9.5 -3.63694 | opp_overlap 1207399 1207388 1207386 ATGGATGCGGAATAA GCCGC AGTG GCGGC CTATTCCAACAACTC MADE_01129 1208108 - 1207443 - | putative calcium binding protein MADE_01130 1208424 - 1208311 - | hypothetical protein MADE_01131 1208519 - 1210438 + | ATP-dependent helicase MADE_01132 1210517 - 1211227 + | peptidase M22, glycoprotease TERM 1229 1211281 - 1211252 - f 70 -9.9 -2.71712 | gap 1, overlap 1211235 1211251 GGGCGTGGTGGAAAC GGCGGGC-GATAGC CTA GCCTCCAGCCCGCC CATGGCCAGATTCGT MADE_01133 1211338 - 1211631 + | hypothetical protein MADE_01134 1211847 - 1211969 + | hypothetical protein TERM 1230 1212015 - 1212027 + F 70 -2.7 -5.13722 | TTCAGAGGAGCGCTT TAATG TCT CGTTA TTTTGTTTTACTAGC MADE_01135 1212017 - 1212673 + | Starvation-inducible outer membrane lipoprotein TERM 1231 1212689 - 1212708 + F 100 -10.7 -5.28983 | ACAATATTGCTTACA GGCGGCA TATTAT TGCCGCC TTTTTCTATTTTAAA TERM 1232 1213427 - 1213439 + G 75 -2.7 -5.14163 | CTTATGCGTGCTATT GTATG CCC TATAC TTTTTATTGGTGCAT MADE_01136 1212770 - 1213609 + | hydrolase, alpha/beta fold family protein TERM 1233 1215102 - 1215092 - g 74 -5.4 -4.62069 | opp_overlap 1215092 TGTTGACCGTAAAAA GGAT ATG ATCC TAGTCTCAGGCTTTA TERM 1234 1215251 - 1215239 - g 74 -5.5 -4.56597 | GTTTGTGGTTAAAAA CAACG ACG CGCTG ACTGAGAAAGACGTT MADE_01137 1213731 - 1215383 + | acyl-CoA synthetase (long-chain-fatty-acid-CoA ligase), acyl-adenylate activating enzyme TERM 1235 1215422 - 1215407 - f 89 -11.8 -3.55815 | opp_overlap 1215407 AAATAGTTTTTGAAA GCCGGC GTTA GCCGGC TTTTTTATTACTGTG TERM 1236 1215407 - 1215422 + F 100 -11.8 -5.5353 | opp_overlap 1215407 AAATAGTTTTTGAAA GCCGGC GTTA GCCGGC TTTTTTATTACTGTG TERM 1237 1215504 - 1215487 - g 80 -5.5 -4.91459 | overlap 1215488 GAACATCTAGAAAAA GTGTGCG AAGC CGCACAA CGTCAAGAGGCAGTC TERM 1238 1215503 - 1215488 - g 72 -9 -3.53791 | overlap 1215487 AACATCTAGAAAAAG TGTGCG AAGC CGCACA ACGTCAAGAGGCAGT MADE_01138 1215445 - 1216602 + | ribonuclease D TERM 1239 1216717 - 1216696 - g 79 -8.7 -4.36993 | AACGCGAAAAAAAGA GGGCATGTA CTTA TACTTGCCC AAAAAAGACAATTTT MADE_01139 1216661 - 1216957 + | hypothetical protein MADE_01140 1217069 - 1216932 - | hypothetical protein MADE_01141 1217056 - 1218027 + | putative transglycosylase TERM 1240 1218416 - 1218428 + G 72 -4.8 -4.67234 | TTTTGACAACAGTGC GCCT TTGTC AGGC TTTTTACCCTTAAGT MADE_01142 1218030 - 1218698 + | putative fumarylacetoacetate hydrolase family protein MADE_01143 1218695 - 1219189 + | hypothetical protein TERM 1241 1219247 - 1219286 + F 83 -12.4 -2.78395 | gap 1, opp_overlap 1219256 1219258, overlap 1219249 1219256 GATTGTTGTTTATCT TAGACTAAAGAGCATGAGT GCT GCTCATGCGC-TTAGTCTA TACTTCCGCTTTGTT TERM 1242 1219249 - 1219284 + F 78 -10.6 -2.9296 | gap 1, opp_overlap 1219256 1219258, overlap 1219247 1219256 TTGTTGTTTATCTTA GACTAAAGAGCATGAGT GCT GCTCATGCGC-TTAGTC TATACTTCCGCTTTG TERM 1243 1219256 - 1219278 + F 70 -8.4 -3.35278 | opp_overlap 1219256 1219258, overlap 1219249 1219247 TTATCTTAGACTAAA GAGCATGAGT GCT GCTCATGCGC TTAGTCTATACTTCC TERM 1244 1219278 - 1219256 - f 73 -7.7 -3.83998 | opp_overlap 1219256 1219249 1219247, overlap 1219258 TTATCTTAGACTAAA GAGCATGAG TGCTG CTCATGCGC TTAGTCTATACTTCC TERM 1245 1219276 - 1219258 - f 74 -8.9 -3.50588 | opp_overlap 1219256 1219249 1219247, overlap 1219256 ATCTTAGACTAAAGA GCATGAG TGCTG CTCATGC GCTTAGTCTATACTT MADE_01144 1219331 - 1220617 + | hypothetical protein MADE_01145 1221203 - 1220649 - | probable ribosomal-protein-serine acetyltransferase TERM 1246 1221132 - 1221104 - G 95 -13.1 -3.87815 | GCCCAGCCTCACAAA GCGCATAGCAGTG TTT CTCTGCGATGCGC TGAATGCTAATAGGG MADE_01146 1221727 - 1221200 - | disulfide bond formation protein B (Disulfide oxidoreductase) TERM 1247 1221689 - 1221667 - G 93 -9.9 -4.58663 | opp_overlap 1221670 1221685 AGGATGTGGCAAAAA GCACAAGCC ACGAA GACTTGTGC TCTGCCCATTGGCTA MADE_01147 1223293 - 1221731 - | Na+/H+ antiporter TERM 1248 1223167 - 1223156 - G 80 -5.8 -4.91473 | CAAGGTAAAAATAAA CTGG ATAA CCAG AGTCCAACCAGCAAT MADE_01148 1223737 - 1224447 + | fatty acid metabolism regulator TERM 1249 1224547 - 1224578 + TF 83 -5.1 -5.35222 | opp_overlap 1224547 GATATTTTAATAAAT GCGTCGCTTTG AATTGTATAG CCAAGCGGCGC TTTTTTATGCCTTTT MADE_01149 1224876 - 1224760 - | hypothetical protein TERM 1250 1225330 - 1225348 + GH 71 -6 -4.19746 | opp_overlap 1225330 TATTAGATGCAAATA TCATGTCT GAA GGGCATGA TTATTTTAGCATCGG TERM 1251 1225719 - 1225703 - gH 77 -8.7 -3.8512 | opp_overlap 1225703 1225700 CATTCATCACAATAA CACCGAT AAA ACCGGTG TAACTTTAGTCGACG MADE_01150 1224855 - 1227032 + | Protease II TERM 1252 1227100 - 1227068 - fH 72 -9.1 -3.406 | opp_overlap 1227070, overlap 1227069 GCAATATTTAACTAA TTGCCCGAGTAAGCA AAA TGCTTATTCGGGCTT TTTTATTTTTGTGTG TERM 1253 1227099 - 1227069 - fH 83 -12.6 -2.63878 | opp_overlap 1227070, overlap 1227068 CAATATTTAACTAAT TGCCCGAGTAAGCA AAA TGCTTATTCGGGCT TTTTTATTTTTGTGT TERM 1254 1227070 - 1227098 + FH 100 -18.3 -5.98675 | opp_overlap 1227069 1227068 AATATTTAACTAATT GCCCGAGTAAGCA AAA TGCTTATTCGGGC TTTTTTATTTTTGTG MADE_01151 1227204 - 1227563 + | hypothetical protein TERM 1255 1227570 - 1227606 + T 85 -11.6 -3.33483 | opp_overlap 1227565, overlap 1227586 AACAAGTAATTCCAT GTTCCTTATGGGCACC GGTTA GGTGCCCATGACGCAC TTAGTCATTTAGCTA MADE_01152 1227816 - 1227637 - | hypothetical protein MADE_01153 1228506 - 1227901 - | hypothetical protein MADE_01154 1229041 - 1228460 - | hypothetical protein TERM 1256 1228555 - 1228581 + gr 100 -13.1 -5.27335 | TAAATGTTGGGTACA GGCAGGTAGCT ATTAA AGCTACTTGCC TTTTTGTTTGCCCAG TERM 1257 1228649 - 1228629 - GR 70 -4.7 -4.42806 | overlap 1228638 TCAGGTTGAAAGAAA CCTGAATCA CCC TGACTGAGG GGAAGATAATCCGAA TERM 1258 1229399 - 1229437 + r 77 -5.3 -4.85782 | gap 1, overlap 1229400 1229401 CCGTACGTACGGTTC TGT-GAGAGGGATGAGGC GCAA GCCTCACCCTACTCGATA TTTGTTTTTAACCCA TERM 1259 1229401 - 1229434 + r 72 -9.5 -3.01668 | overlap 1229400 1229399 GTACGTACGGTTCTG TGAGAGGGATGAGGC GCAA GCCTCACCCTACTCG ATATTTGTTTTTAAC MADE_01155 1230868 - 1229423 - | hypothetical protein TERM 1260 1229646 - 1229665 + g 73 -2.2 -5.10877 | gap 1, overlap 1229646 TTCGGGATGACTTCT TGT-TCACC ACT GGTGACATA TTTTTGGTTTCTTGT MADE_01156 1232407 - 1230947 - | predicted esterase of the alpha-beta hydrolase superfamily protein MADE_01157 1232812 - 1234020 + | hypothetical protein TERM 1261 1234442 - 1234456 + G 71 -10 -3.25652 | overlap 1234441 TTCTGTTTGACTCGC TGTCCC AAC GGGACA TGTTAATTGCGTCAA MADE_01158 1234051 - 1234716 + | transcriptional regulator PhaD TERM 1262 1234984 - 1234961 - g 81 -3.9 -5.40072 | overlap 1234962 GCGCCGGTAAAAAAA CTGAACATG GACTAT CACGTTCAA ATTCACAAAGTAGCT TERM 1263 1235077 - 1235089 + G 78 -4.8 -4.91852 | CCCTGACAAACCGTT GTGG CAGTA CCAC TTTATTTTTGATGAA TERM 1264 1235976 - 1235996 + G 77 -11.1 -3.22789 | opp_overlap 1235980, overlap 1235971 ATATCACGCTGATGA CATACGCCG GAA CGGCGAATG TTGGCTTGGTGTGCT TERM 1265 1235992 - 1235980 - g 73 -10.5 -2.94416 | opp_overlap 1235976 1235971 CACGCTGATGACATA CGCCG GAA CGGCG AATGTTGGCTTGGTG MADE_01159 1234727 - 1236166 + | hypothetical protein TERM 1266 1236213 - 1236203 - T 79 -6.8 -4.55287 | opp_overlap 1236202 1236203 TTGACGTAGATAAAA GCGT AAA ACGC CTTCTTCTACCCGAA MADE_01160 1236910 - 1236185 - | hypothetical protein MADE_01161 1237125 - 1238777 + | hypothetical alcohol dehydrogenase MADE_01162 1239385 - 1238780 - | transcription regulator, TetR family protein TERM 1267 1239201 - 1239216 + g 82 -6.8 -4.79451 | CCTTTTGCCGCGATG GCGCTT AACA AGGCGC TTTTATCTTTAAAAT TERM 1268 1239435 - 1239476 + H 80 -10.3 -3.66497 | overlap 1239431 1239438 TAGATAACGTTTTAT CTTGACAGTGTCAACATAG CCTT TTATCTTGACGCTGTCTAG TTTGCAAATTTGTTA TERM 1269 1239438 - 1239473 + H 78 -10.6 -2.93381 | overlap 1239431 1239435 ATAACGTTTTATCTT GACAGTGTCAACATAG CCTT TTATCTTGACGCTGTC TAGTTTGCAAATTTG MADE_01163 1239523 - 1240362 + | enoyl-CoA hydratase/isomerase family protein MADE_01164 1240587 - 1242629 + | 2,4-dienoyl-CoA reductase TERM 1270 1242715 - 1242662 - T 89 -9.7 -4.15565 | gap 1, opp_overlap 1242679, overlap 1242679 GTTAGCAGTGTAAAA CGCTA-GCATAGTAGAAAGCGCTTCA GTA TGAAGCGCTTTTTTGTTTGCCCAGCG AAGCTGGCAAACCCG TERM 1271 1242679 - 1242697 + T 100 -13.2 -5.63517 | opp_overlap 1242679 1242662 CTAGCATAGTAGAAA GCGCTTCA GTA TGAAGCGC TTTTTTGTTTGCCCA TERM 1272 1242697 - 1242679 - T 100 -13.2 -4.03078 | opp_overlap 1242679, overlap 1242662 CTAGCATAGTAGAAA GCGCTTCA GTA TGAAGCGC TTTTTTGTTTGCCCA MADE_01165 1243158 - 1242664 - | hypothetical protein TERM 1273 1242766 - 1242746 - G 70 -4.7 -4.42806 | overlap 1242755 TCAGGTTGAAAGAAA CCTGAATCA CCC TGACTGAGG GGAAGATAATCCGAA MADE_01166 1243526 - 1243999 + | hypothetical protein TERM 1274 1244024 - 1244049 + T 79 -9.1 -3.93369 | opp_overlap 1244023 1244025, overlap 1244025 CAGTGTGGTTTAAAT AGGTGTACTTT GATG AAAGTACACCG TTTGGTTAAACTTAA TERM 1275 1244048 - 1244025 - T 87 -12.6 -3.34517 | opp_overlap 1244024 1244025, overlap 1244023 AGTGTGGTTTAAATA GGTGTACTTT GATG AAAGTACACC GTTTGGTTAAACTTA TERM 1276 1244025 - 1244048 + T 84 -12.6 -2.95539 | opp_overlap 1244025 1244023, overlap 1244024 AGTGTGGTTTAAATA GGTGTACTTT GATG AAAGTACACC GTTTGGTTAAACTTA MADE_01167 1245290 - 1244061 - | peptidase A2A, retrovirus, catalytic MADE_01168 1245700 - 1245278 - | thioesterase superfamily MADE_01169 1246510 - 1245791 - | hypothetical protein MADE_01170 1246656 - 1247279 + | hypothetical protein TERM 1277 1247442 - 1247426 - g 73 -2.2 -5.26316 | opp_overlap 1247439, overlap 1247439 GGAGCCGAGAAAAAA GCCAAT GAAAA AATGGC GAAAGCGCTCAGTAT TERM 1278 1247453 - 1247439 - g 76 -2.1 -5.29385 | gap 1, opp_overlap 1247439, overlap 1247426 1247447 AAGCCAATGAAAAAA TG-GCG AAAG CGCTCA GTATTCTTGAAGCGC TERM 1279 1247855 - 1247845 - g 79 -8.2 -4.3014 | opp_overlap 1247849 AGATATTGACGAAAA CGCG TTT CGCG AAGGGAAAGTTATTG TERM 1280 1248034 - 1248058 + G 74 -7.1 -4.2528 | TGTCATGGGGTCAGG CTCCACGGTAG GCG CTGTCATGGAG TTTCTTGGCTTAGAC MADE_01171 1247276 - 1248424 + | ATP-NAD/AcoX kinase MADE_01172 1248513 - 1248806 + | hypothetical protein TERM 1281 1248795 - 1248813 + F 86 -11.8 -3.36492 | CTTTGGGCACGACTA GTCGCAAT ATA ATTGCGAC TTCTAGCCTTGAGCC MADE_01173 1248953 - 1251745 + | Peptidase, M16 family protein TERM 1282 1251772 - 1251791 + T 100 -10.7 -5.5112 | opp_overlap 1251755 TTAAATTGAATTTTA GGGCCGA AAATAA TCGGCCC TTTTTTCTTACTCAC MADE_01174 1252146 - 1251799 - | Alkylhydroperoxidase TERM 1283 1251990 - 1252002 + g 86 -4.8 -5.61277 | opp_overlap 1251990 CTATACCAATAGCAA GAGC AAGGA GCTC TTTTGTTTTTTTATC MADE_01175 1252473 - 1256528 + | GGDEF domain protein MADE_01176 1256603 - 1257910 + | hypothetical Short chain fatty acid transporter MADE_01177 1259513 - 1258020 - | putative anion transport protein (ABC superfamily, ATP-binding protein) TERM 1284 1258570 - 1258558 - G 71 -7.7 -3.93026 | opp_overlap 1258568 AACATTTGAAGCAAA CAGGT TTT ACCTG ACCCGTTCGGGCCCG MADE_01178 1259992 - 1259918 - | hypothetical protein TERM 1285 1260489 - 1260474 - g 82 -5.4 -5.10526 | gap 1, overlap 1260483 1260486 ACAGCAAAAAAGAAA GCGC-AG CAA CTAGCGC TAAACATTACGCGCT MADE_01179 1260021 - 1261253 + | putative periplasmic protein TERM 1286 1262086 - 1262108 + G 73 -4 -4.88736 | TAAATTTAGCCGACA TGTCTATGGC GAT GCCGCCGACA TTTTTGTAGATAATG MADE_01180 1261268 - 1262335 + | hypothetical protein MADE_01181 1262466 - 1262981 + | hypothetical oxidoreductase protein TERM 1287 1262991 - 1263009 + F 72 -8.8 -3.57572 | opp_overlap 1262982, overlap 1262993 AGATAATTGGACTCC CCCAACTC AGT GAGCTGGG TTAATATTTTAGTTC MADE_01182 1263053 - 1264090 + | ISCps1, transposase TERM 1288 1264902 - 1264884 - g 70 -2.4 -4.98436 | overlap 1264886 GTAACAGCACAAAAA GATTTCTC TGA GAAAAAGC ACGTGGGTAAAATTG MADE_01183 1264392 - 1264979 + | hypothetical oxidoreductase protein TERM 1289 1265020 - 1265050 + T 100 -12.7 -4.81685 | opp_overlap 1265020 1265026, overlap 1265021 TTGTTTTAGATGACA TTAAAATGCCCGC TAAAT GCGGGCATTTTAC TTTTTGCTAGTTGCT TERM 1290 1265050 - 1265020 - T 83 -12.7 -2.85351 | opp_overlap 1265020 1265021, overlap 1265026 TTGTTTTAGATGACA TTAAAATGCCCGC TAAAT GCGGGCATTTTAC TTTTTGCTAGTTGCT TERM 1291 1265021 - 1265049 + T 100 -16.2 -3.47927 | opp_overlap 1265020 1265026, overlap 1265020 TGTTTTAGATGACAT TAAAATGCCCGC TAAAT GCGGGCATTTTA CTTTTTGCTAGTTGC TERM 1292 1265044 - 1265026 - T 95 -11.7 -4.38171 | opp_overlap 1265021 1265020, overlap 1265020 TAGATGACATTAAAA TGCCCGC TAAAT GCGGGCA TTTTACTTTTTGCTA MADE_01184 1265460 - 1265047 - | Transcriptional regulator, MerR family protein MADE_01185 1265552 - 1266037 + | hypothetical protein MADE_01186 1266124 - 1266561 + | CN5-related N-acetyltransferase MADE_01187 1266609 - 1266953 + | Lactoylglutathione lyase 2396 TERM 1293 1266986 - 1267003 + F 77 -7.7 -4.25104 | gap 1 GCTTTCTGTCCTAAG GCGGCAGG TCG CCT-CCGC TTTTCATGCACGGCC MADE_01188 1267288 - 1267953 + | hypothetical protein MADE_01189 1267958 - 1268722 + | lipoprotein, putative MADE_01190 1268733 - 1269473 + | hypothetical protein TERM 1294 1269470 - 1269451 - T 90 -9.3 -4.90778 | opp_overlap 1269448, overlap 1269446 TGGACTTAAACAAAA TGGCGAG GGCCGT CTCGCCA TAATCCTATCGAGTA MADE_01191 1271807 - 1269582 - | fused 5-methylaminomethyl-2-thiouridine-forming enzyme methyltransferase and FAD-dependent demodification enzyme TERM 1295 1270872 - 1270860 - G 71 -6.9 -4.08064 | AAGCTGGGGGTAAAA CCCAC CTT GCGGG TTGCCAGACGCACCA MADE_01192 1273016 - 1271811 - | kelch motif domain protein MADE_01193 1273240 - 1274874 + | acyl-CoA synthase MADE_01194 1275168 - 1276382 + | 3-oxoacyl-(acyl-carrier-protein) synthase TERM 1296 1276481 - 1276441 - T 100 -11.9 -5.45802 | opp_overlap 1276441 GCTTGAAAACAAAAA GGGCGTAAACCCGAACACC ACG AGTGTTTGTGTTTATGCCC TTTTTTATTGGTGTT TERM 1297 1276441 - 1276481 + T 100 -15.6 -5.54885 | opp_overlap 1276441 GCTTGAAAACAAAAA GGGCGTAAACCCGAACAC CACGA GTGTTTGTGTTTATGCCC TTTTTTATTGGTGTT MADE_01195 1278178 - 1276499 - | penicillin-binding protein TERM 1298 1276624 - 1276613 - G 76 -4.4 -5.08824 | TTGTGAGCTAAAAAA GTCA TCTT TGAC TGGCGCAATATAATG TERM 1299 1276868 - 1276889 + g 73 -4.5 -4.77036 | overlap 1276870 ATAAATCTCTCCCTC TACATTCAG CATC TTGAATGTG TTTTTGCTGATAGGA MADE_01196 1278704 - 1278934 + | helix-turn-helix protein, CopG MADE_01197 1279215 - 1279087 - | hypothetical protein MADE_01198 1280052 - 1279363 - | cyclic nucleotide-binding protein TERM 1300 1280705 - 1280688 - g 73 -2 -5.21236 | gap 1, overlap 1280690 AACCCAGAAGAAAAA GT-GCGA TTGGT TCGCGAC CTTGGCGATACCCAA MADE_01199 1280229 - 1280984 + | class II aldolase/adducin-like protein MADE_01200 1281014 - 1281142 + | hypothetical protein TERM 1301 1282400 - 1282426 + G 73 -8 -4.06361 | TTCAAAACACATTCA CCGAGCTTGGCT TTC AGGTAAGCTTGG TTTAGTTATATATAA MADE_01201 1281223 - 1282431 + | erythronate-4-phosphate dehydrogenase TERM 1302 1283031 - 1283021 - g 73 -4 -4.78149 | TCGAGAAGTTAAAAA TGAA GCG TTCA GCCGTCAGATTGCGT MADE_01202 1282461 - 1283477 + | Aspartate-semialdehyde dehydrogenase TERM 1303 1283487 - 1283506 + F 73 -8.6 -3.65046 | opp_overlap 1283487 CTATAGTTAGTAAAA GCGGTTAA TTTT TTAGCCGC TTGTTCGGCTAAGCA TERM 1304 1283506 - 1283487 - f 71 -6.4 -4.29738 | opp_overlap 1283487 CTATAGTTAGTAAAA GCGGTTAA TTTT TTAGCCGC TTGTTCGGCTAAGCA TERM 1305 1284807 - 1284785 - g 80 -9.8 -3.95456 | AAACGCAATAGCAAA CCGGAAGAAG AAC CTTCGCCCGG CCCTACGATTACTTC TERM 1306 1286065 - 1286029 - g 71 -7.9 -3.92746 | overlap 1286027 1286057 TTCAGCGGAAAAACA GCCTCTTACGTCTGACG CCC CGTCAGAAGAAAGCGCC CCTTCGGATGTGTCG MADE_01203 1283963 - 1288042 + | AAA ATPase containing von Willebrand factor type A (vWA) MADE_01204 1288198 - 1288992 + | tRNA pseudouridine synthase A MADE_01205 1289020 - 1289832 + | ABC-type amino acid transport/signal transduction system, periplasmic component/domain TERM 1307 1289891 - 1289876 - f 78 -7.6 -4.46267 | opp_overlap 1289875 1289870 1289876 ATAATTTAAGTAAAA GCTAAC AGCG GTTAGC ATTACTTATGTCGAC TERM 1308 1289990 - 1290000 + F 87 -3.2 -5.73978 | AGGTAGCTGTTCTAT TGTG TTA CGCA TTTTTTCTTTGTAAT TERM 1309 1290856 - 1290834 - g 81 -4.9 -5.09762 | gap 1, opp_overlap 1290834 ACGGTAAGAGAAAAA CTGC-CTGAA GGTT TCCAGCGCAG TGAATTCCTTGTTGA MADE_01206 1290114 - 1290959 + | acetyl-CoA carboxylase, carboxyl transferase, beta subunit MADE_01207 1290959 - 1292290 + | bifunctional folylpolyglutamate synthase/dihydrofolate synthase MADE_01208 1292339 - 1292950 + | dedD protein MADE_01209 1294523 - 1293927 - | bacteriocin production protein MADE_01210 1295761 - 1294910 - | site-specific recombinase, resolvase family protein TERM 1310 1296180 - 1296192 + r 75 -7.7 -4.13654 | overlap 1296188 GGGGGAGTAGGGACT TCGTC ACT GACGA TTTGTCCTTTCAGAG MADE_01211 1297068 - 1296202 - | bacteriocin production protein TERM 1311 1296973 - 1296961 - G 71 -7.7 -3.99806 | opp_overlap 1296961 1296960 ATAACCCACGATAAA CGAAG AGA CTTCG GTTTGTTCTCTATCC TERM 1312 1297387 - 1297398 + r 72 -4.4 -4.83169 | overlap 1297397 AGCGCATGAGATACT GCAA GACG TTGC TTTTTCTACAAAGCT MADE_01212 1298853 - 1297843 - | site-specific recombinase, resolvase family protein MADE_01213 1299165 - 1298929 - | probable epoxide hydrolase TERM 1313 1299134 - 1299150 + g 77 -3.7 -5.20222 | TGAAGTGCAACTACC CAATGCT CTC GGTATTG TTTTCTTTGTTTCAT MADE_01214 1300640 - 1299288 - | sensor histidine kinase MADE_01215 1302166 - 1300637 - | Response regulator TERM 1314 1301107 - 1301122 + g 78 -5.4 -4.82901 | overlap 1301118 TGGTGTCAATAAACT CTCTAC TCAT GTGGAG TTTTTCTGACAAAAA MADE_01216 1302490 - 1303161 + | putative oxidoreductase MADE_01217 1305109 - 1303217 - | putative diguanylate cyclase/phosphodiesterase domain 2 (EAL) TERM 1315 1304434 - 1304449 + g 73 -4.6 -4.8622 | GCTGCAAACCACTTT CTTCGC TCTC GCGCAG TTTTTCGTTAAACAA TERM 1316 1305261 - 1305234 - R 100 -14.3 -6.10489 | opp_overlap 1305236 1305238 AAGGTTAAAAAAAAA GACAGCAAAGC TCGTAG GCTTTGCTGTC TTAACGAGGTGCGTA TERM 1317 1305236 - 1305259 + r 82 -11.8 -3.02511 | opp_overlap 1305234, overlap 1305238 GGTTAAAAAAAAAGA CAGCAAAGCT CGTA GGCTTTGCTG TCTTAACGAGGTGCG MADE_01218 1306463 - 1305309 - | Iron-containing alcohol dehydrogenase MADE_01219 1306596 - 1307504 + | putative LysR-family transcriptional regulator TERM 1318 1307520 - 1307547 + T 90 -10.7 -4.26344 | gap 1, opp_overlap 1307515 1307509 1307520 ATAAGCAGAATCGAA GCGACGCCA-AT AAATA ATGTGGCGTCGC TTTTACTGCAAATGT TERM 1319 1307547 - 1307520 - T 80 -10.7 -3.26932 | gap 1, opp_overlap 1307520, overlap 1307515 1307509 ATAAGCAGAATCGAA GCGACGCCA-AT AAATA ATGTGGCGTCGC TTTTACTGCAAATGT MADE_01220 1307990 - 1307571 - | ABC-type phosphate transport system, periplasmic component MADE_01221 1308099 - 1308383 + | hypothetical protein TERM 1320 1309020 - 1309007 - g 81 -3.8 -5.27923 | TAACGTGATAAAAAA TGGC GAGCGT GCCA TAGGCACAAAGTTAG TERM 1321 1310262 - 1310227 - g 78 -5.4 -4.88786 | AGCAAAACAAAGAAA CAGCGTTTAAAACCGT GGAA ACGACTAAAAACGCCG GTGATTCGTTAAAGC MADE_01222 1308759 - 1310501 + | methyl-accepting chemotaxis protein MADE_01223 1310698 - 1310576 - | hypothetical protein TERM 1322 1310637 - 1310655 + g 100 -7.4 -5.64274 | opp_overlap 1310637 AAATAACGCCAAAAA GAGCGC CTGATGT GCGCTC TTTTTTTGTGCATAA TERM 1323 1310655 - 1310637 - G 82 -7.4 -4.7153 | opp_overlap 1310637 AAATAACGCCAAAAA GAGCGC CTGATGT GCGCTC TTTTTTTGTGCATAA TERM 1324 1310704 - 1310721 + H 76 -7.1 -4.26188 | opp_overlap 1310704 GATAAACCATTTAAA TGTTTCA ATTT TGAAACA TTTTAGATATGTGAC TERM 1325 1312658 - 1312645 - g 75 -9.5 -3.58343 | GGTACTACTTTCAAA CGGCG ATAC CGCCG ATGCAGACCGTAAAG TERM 1326 1314164 - 1314176 + G 70 -9.1 -3.43071 | overlap 1314168 GCGGTAGTTTCACTT CAGGG TAA CCCTG TTACTTCATCTAACG MADE_01224 1310918 - 1314958 + | extracellular ribonuclease/nuclease fusion protein TERM 1327 1315517 - 1315487 - g 71 -10.4 -2.74799 | opp_overlap 1315482 1315482 1315493 1315494, overlap 1315486 CACAAGCTTTGAAAT CGCCCAAGTACCTG CAC CAGGTACCTTTGCG CTATCTCTTTTAGCT TERM 1328 1315494 - 1315510 + G 74 -10.9 -2.79202 | opp_overlap 1315487 1315486, overlap 1315493 1315482 1315482 TTTGAAATCGCCCAA GTACCTG CAC CAGGTAC CTTTGCGCTATCTCT MADE_01225 1314975 - 1315574 + | hypothetical protein TERM 1329 1315615 - 1315597 - f 86 -11.7 -3.38683 | opp_overlap 1315597, overlap 1315592 ATACTTAAAAGCTAA GCCCAGC CAAGT GCTGGGC TTTTTTGTTTGCCCA TERM 1330 1315597 - 1315615 + F 100 -11.7 -5.63517 | opp_overlap 1315597 1315592 ATACTTAAAAGCTAA GCCCAGC CAAGT GCTGGGC TTTTTTGTTTGCCCA TERM 1331 1316449 - 1316487 + F 74 -5.3 -4.79053 | gap 1, overlap 1316450 1316451 CCGTACGTACGGTTC TGT-GAGAGGGATGAGGC GCAA GCCTCACCCTACTCGATA TTTCTTTTGCTATTT TERM 1332 1316451 - 1316484 + F 72 -9.5 -2.97205 | overlap 1316450 1316449 GTACGTACGGTTCTG TGAGAGGGATGAGGC GCAA GCCTCACCCTACTCG ATATTTCTTTTGCTA TERM 1333 1316561 - 1316571 + G 73 -4 -4.82901 | GTGCGCACCATGTTA GAAA CCA TTTC TTTTTCTCAACGCCA MADE_01226 1316555 - 1317442 + | hypothetical protein MADE_01227 1319588 - 1317489 - | two-component hybrid sensor and regulator TERM 1334 1319099 - 1319081 - G 79 -3.1 -5.28983 | GGGAAAAGATAAAAA CCGCTTC TATGC AAAGCAG TGCTAGCGTGGCTAA TERM 1335 1319688 - 1319668 - H 70 -8.4 -3.38966 | GATAATAGATACCAA GTAGTTAC GCAAT GTAACTAC TAAACTAAATAAAAG TERM 1336 1319715 - 1319698 - H 73 -7.1 -4.12225 | AACTACTAAACTAAA TAAAAGG TTCC CCTTTTA ACTCCAATATCGTGG TERM 1337 1320219 - 1320262 + G 71 -3.9 -4.87665 | gap 2, overlap 1320209 1320207 TACTGCGGGAACGCT TACCCGTATTGCTACGGTGCC CCTT GGCGCAGAAGTAA--CGGGTA TTTTTCTCACTGACG TERM 1338 1320619 - 1320631 + G 83 -4.1 -5.28176 | ATTTCAACAGCAGAA GGTGA GGG TTACC TTTTTTCTAACTGGG TERM 1339 1321447 - 1321430 - g 79 -10.5 -3.53012 | TCGCTTTCCTTGAAA GCCGCGC CGCA GCGCGAC TTAAAGGCGCAACGG MADE_01228 1320007 - 1321881 + | putative cell surface protein TERM 1340 1321905 - 1321926 + F 100 -11.5 -5.1925 | opp_overlap 1321904 1321902 1321905 TTTAATTTAAAATAC GCCGGGTGT TTAC GCGCCCGGC TTTTTTCCGTTGTGA TERM 1341 1322818 - 1322808 - g 72 -5.4 -4.42788 | GGTAAGCTCACAAAA TCAG TGA CTGA AATTGCCCGTTCCTC MADE_01229 1321947 - 1323689 + | hypothetical protein TERM 1342 1323718 - 1323751 + T 71 -9.7 -2.79968 | opp_overlap 1323713 1323712, overlap 1323717 GTCTGAAAATGAGCG TTTGCTCGTGAAC TAAAGTGT GTTCGCGGGCAAA ATTTCAAATTGGATA MADE_01230 1324323 - 1323730 - | hypothetical protein MADE_01231 1324970 - 1324341 - | hypothetical protein MADE_01232 1326022 - 1325039 - | glycosyl transferase, family 2 MADE_01233 1326116 - 1326238 + | hypothetical protein TERM 1343 1326230 - 1326218 - f 70 -2.7 -5.05301 | overlap 1326222 1326226 AAAGAAGGAGAAAAA TTTAC AAA GCAAA CGCAATAGCTTTGCC MADE_01234 1326456 - 1327004 + | hypothetical protein TERM 1344 1327021 - 1327008 - T 74 -5.3 -4.72272 | GGCTCTCACTAAAAA CAAAC AATA GTTTG GTTCGCGCTTATAGG MADE_01235 1328015 - 1327038 - | Endonuclease/exonuclease/phosphatase TERM 1345 1327811 - 1327796 - G 71 -7.6 -3.9243 | TAATTTGGTAAACAA GGCTTA TTGT TAAGCC ACCTACGGCGAGTGC MADE_01236 1328527 - 1328387 - | hypothetical protein MADE_01237 1328532 - 1329059 + | putative hyperosmotically inducible periplasmic protein TERM 1346 1329082 - 1329109 + TF 100 -15 -3.06915 | opp_overlap 1329089, overlap 1329089 TTTATTCGACTTAAT GGAAAAAGGGGC GCTC GCCCCTTTTTTC TTGCCTGACGTAAGT TERM 1347 1329089 - 1329102 + TF 100 -9.5 -5.4833 | opp_overlap 1329089, overlap 1329082 GACTTAATGGAAAAA GGGGC GCTC GCCCC TTTTTTCTTGCCTGA TERM 1348 1329102 - 1329089 - Tf 93 -9.5 -4.75174 | opp_overlap 1329089 1329082 GACTTAATGGAAAAA GGGGC GCTC GCCCC TTTTTTCTTGCCTGA MADE_01238 1330746 - 1329154 - | putative alginate lyase TERM 1349 1330495 - 1330530 + gF 73 -4.2 -4.77216 | gap 1 AAACACCATATTTCC CTCA-TCATCTAGAT AAAAGAA GTCTGGATGACTGAG TTTTTGAATATTCTT MADE_01239 1330746 - 1330862 + | hypothetical protein MADE_01240 1331156 - 1331533 + | hypothetical protein TERM 1350 1331539 - 1331556 + T 100 -12.7 -4.8622 | opp_overlap 1331539 1331534 AGCAATTTAACGAGA GGCCCCT AGCA AGGGGCC TTTTTCATTGCGAAA TERM 1351 1331556 - 1331539 - T 84 -12.7 -2.94258 | opp_overlap 1331539, overlap 1331534 AGCAATTTAACGAGA GGCCCCT AGCA AGGGGCC TTTTTCATTGCGAAA MADE_01241 1332344 - 1331589 - | putative MTA/SAH nucleosidase TERM 1352 1332640 - 1332657 + r 88 -11.3 -3.72893 | opp_overlap 1332640 TTTAGGCAAAAAAAA GCGAAGC ATTT GCTTCGC TTTAATACCCGAGTG TERM 1353 1332657 - 1332640 - R 100 -11.3 -5.81412 | opp_overlap 1332640 TTTAGGCAAAAAAAA GCGAAGC ATTT GCTTCGC TTTAATACCCGAGTG MADE_01242 1334112 - 1332676 - | pyruvate kinase II TERM 1354 1334251 - 1334287 + r 100 -16.8 -2.93335 | opp_overlap 1334256, overlap 1334256 GTGAATGAAATAAAG AAAAACGCCTAACTGG CTCGA CCAGTTAGGCGTTTTC GTTATATTTATAAGC TERM 1355 1334256 - 1334282 + r 100 -16.7 -4.58724 | opp_overlap 1334256, overlap 1334251 TGAAATAAAGAAAAA CGCCTAACTGG CTCGA CCAGTTAGGCG TTTTCGTTATATTTA TERM 1356 1334282 - 1334256 - R 100 -17.4 -5.5454 | opp_overlap 1334256 1334251 TGAAATAAAGAAAAA CGCCTAACTGGC TCG ACCAGTTAGGCG TTTTCGTTATATTTA MADE_01243 1335203 - 1334352 - | transcriptional regulator, RpiR family protein MADE_01244 1335488 - 1336981 + | glucose-6-phosphate 1-dehydrogenase MADE_01245 1336983 - 1337675 + | 6-phosphogluconolactonase TERM 1357 1337890 - 1337880 - g 77 -6.8 -4.5442 | opp_overlap 1337878 1337875 1337880, overlap 1337875 CGCTCAATGACAAAA GCCA ACG TGGC TATTGTGTCTGCATA TERM 1358 1338485 - 1338462 - g 72 -5.3 -4.72497 | gap 1, overlap 1338464 GATGCACTAACAAAA GC-CGCTGCT GTTCA AGCAACGCGC CTAACAGATCTTGGC MADE_01246 1337685 - 1339511 + | 6-phosphogluconate dehydratase MADE_01247 1339511 - 1340464 + | glucokinase TERM 1359 1340720 - 1340702 - g 76 -11.8 -2.60423 | opp_overlap 1340705, overlap 1340705 ACGGTAACTAATGCA CAACAGCT AAA AGCTGTTG TTGAAGCCGGTGCTA MADE_01248 1340468 - 1341112 + | keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase TERM 1360 1341136 - 1341165 + T 100 -12.3 -4.74706 | opp_overlap 1341143, overlap 1341143 TTGCTTCGACATTTT AAAAAAACCTGCC TTGC GGCAGGTTTTTTC TTTTTAGCTATTAAG TERM 1361 1341158 - 1341143 - T 100 -10.4 -5.45726 | opp_overlap 1341136 1341143 GACATTTTAAAAAAA CCTGCC TTGC GGCAGG TTTTTTCTTTTTAGC TERM 1362 1341143 - 1341158 + T 100 -10.4 -5.93252 | opp_overlap 1341143, overlap 1341136 GACATTTTAAAAAAA CCTGCC TTGC GGCAGG TTTTTTCTTTTTAGC TERM 1363 1341257 - 1341273 + T 70 -5.9 -4.43208 | overlap 1341258 ACTTTAGACGTTGGC TTATCGT GGA ACGATAG TTTGTTTCAGCGTGT MADE_01249 1342108 - 1341257 - | uncharacterized aldose 1-epimerase-like protein TERM 1364 1342273 - 1342251 - R 100 -8.5 -5.80951 | opp_overlap 1342251 ACTTAAAACAAAAAA GGTGCAAAC GCAGT GTTTACACC TTTAGATTAACTCAA TERM 1365 1342290 - 1342322 + r 82 -6.5 -4.85618 | opp_overlap 1342296 1342297 1342301 TTAGATTAACTCAAC TTTAAAGCAAATAGT TTA ACTATTTGATCTAAA TTTTATTAATTATTT MADE_01250 1343327 - 1342332 - | glyceraldehyde-3-phosphate dehydrogenase TERM 1366 1344778 - 1344764 - g 74 -7.1 -4.25056 | CAGGCGAGCAACAAA GCCAG TGATG CTGGC ATGACCATTGGCTTG MADE_01251 1343564 - 1345762 + | putative 4-alpha-glucanotransferase TERM 1367 1345808 - 1345782 - f 83 -3.1 -5.55664 | gap 1, opp_overlap 1345783 1345787, overlap 1345783 TCACTATTAAAAAAA TGTTAA-TAGGC AGTT GCCTAGTTAACT TAATCGAGTAAGATA TERM 1368 1345878 - 1345851 - f 73 -10 -2.87132 | opp_overlap 1345849, overlap 1345858 GGTGCTTTTGATAGA GCTTAAACACAT AAAG ACGTGCTTAAGC TCTCAATTCAACCCG TERM 1369 1345890 - 1345905 + F 83 -7.5 -4.72986 | opp_overlap 1345890 AAGCTCTCAATTCAA CCCGC TGCCAT GCGGG TTTTTACTAGGAGTA MADE_01252 1345925 - 1348117 + | glycogen branching enzyme TERM 1370 1348359 - 1348337 - g 88 -7.7 -5.0538 | opp_overlap 1348337 CGTTACCCGAAAAAA CAGGCGATG TGTGG CATGGCCTG TTTACTGGCGTAAGC TERM 1371 1348337 - 1348359 + G 72 -8.4 -3.74693 | opp_overlap 1348337 CGTTACCCGAAAAAA CAGGCGATGT GTG GCATGGCCTG TTTACTGGCGTAAGC TERM 1372 1348645 - 1348680 + G 84 -10.5 -3.85698 | gap 1, opp_overlap 1348644 AAAGGGCTTACCAAG CTTCACCCCGGTGTTC CTAAA GAGCACAGGGG-GAAG TTTATCGGGGCGGCG TERM 1373 1350039 - 1350028 - g 74 -5.8 -4.72272 | opp_overlap 1350028, overlap 1350034 GTGGGCGACCAAAAA CCAG AACA CTGG TTTTTATGCGTAAAT TERM 1374 1350028 - 1350039 + G 78 -5.8 -4.88067 | opp_overlap 1350028 1350034 GTGGGCGACCAAAAA CCAG AACA CTGG TTTTTATGCGTAAAT MADE_01253 1348147 - 1350234 + | glycogen debranching enzyme GlgX MADE_01254 1350292 - 1350420 + | hypothetical protein TERM 1375 1351955 - 1351969 + G 70 -10 -3.07307 | overlap 1351957 AGCTATTACGATTCG TACCGC ACT GCGGTA TTACCTGCAAATTTA MADE_01255 1350554 - 1352107 + | 6-phosphogluconate dehydrogenase TERM 1376 1352110 - 1352091 - f 72 -8.6 -3.53012 | CTGCGCGGCCTCAAA CCGCTATC AAAA GATAACGG CTGACGATTATTGCA TERM 1377 1352199 - 1352176 - f 100 -12.6 -4.64657 | opp_overlap 1352176 CGAAAGTTGGAAAAA GGTGTATTTG GTCT CAAATACACC TTTTTTAATGATAAG TERM 1378 1352176 - 1352199 + F 100 -12.6 -5.1861 | opp_overlap 1352176 CGAAAGTTGGAAAAA GGTGTATTTG GTCT CAAATACACC TTTTTTAATGATAAG MADE_01256 1352224 - 1352652 + | methionine sulfoxide reductase B TERM 1379 1352741 - 1352775 + T 86 -10.2 -3.96618 | opp_overlap 1352750, overlap 1352742 1352750 GCCTGTTTTGAATTT GTAAAAAAACCGCC CATAAAC GGCGGTTTTTTTAA TTATTTAGCATTAAA TERM 1380 1352742 - 1352774 + T 93 -13.7 -2.97489 | opp_overlap 1352750, overlap 1352741 1352750 CCTGTTTTGAATTTG TAAAAAAACCGCC CATAAAC GGCGGTTTTTTTA ATTATTTAGCATTAA TERM 1381 1352766 - 1352750 - T 91 -6.5 -5.43866 | opp_overlap 1352742 1352741 1352750 GAATTTGTAAAAAAA CCGCC CATAAAC GGCGG TTTTTTTAATTATTT TERM 1382 1352750 - 1352766 + T 100 -6.5 -5.73672 | opp_overlap 1352750, overlap 1352742 1352741 GAATTTGTAAAAAAA CCGCC CATAAAC GGCGG TTTTTTTAATTATTT MADE_01257 1353675 - 1352815 - | hypothetical protein TERM 1383 1353612 - 1353625 + g 76 -2.3 -5.4505 | opp_overlap 1353608 1353612, overlap 1353613 CCGATATTAAACCCA TCGCT GATA AGCGC TTTTTTGTTGGAAAC TERM 1384 1354724 - 1354702 - g 93 -9.2 -4.80882 | AGGCGACATCAAAAA CATCGTTCAC GGT GTTAACGATG AAGAAGTAACGCCAG MADE_01258 1353893 - 1355338 + | glyceraldehyde-3-phosphate dehydrogenase TERM 1385 1355401 - 1355433 + F 81 -12.2 -2.64375 | opp_overlap 1355409, overlap 1355409 AAGCGTTAAATTGTA TAAAAAAACCGACC CAAGT GGTCGGTTTTTTAA TGGTGTAAACATTTT TERM 1386 1355425 - 1355409 - f 100 -9.4 -5.63504 | opp_overlap 1355401 1355409 AATTGTATAAAAAAA CCGACC CAAGT GGTCGG TTTTTTAATGGTGTA TERM 1387 1355409 - 1355425 + F 100 -9.4 -5.20216 | opp_overlap 1355409, overlap 1355401 AATTGTATAAAAAAA CCGACC CAAGT GGTCGG TTTTTTAATGGTGTA MADE_01259 1355545 - 1356684 + | predicted carboxypeptidase, Zn dependent TERM 1388 1356738 - 1356719 - f 77 -6.4 -4.57341 | opp_overlap 1356719 1356713 AAGCTTCCGTAAAAA GGCCTC GACAAAAA GAGGCC TTTTAATTATTAAAA TERM 1389 1356719 - 1356738 + F 77 -6.4 -4.56133 | opp_overlap 1356719, overlap 1356713 AAGCTTCCGTAAAAA GGCCTC GACAAAAA GAGGCC TTTTAATTATTAAAA MADE_01260 1356824 - 1358455 + | Na(+)-linked D-alanine glycine permease TERM 1390 1358529 - 1358570 + T 85 -2.5 -5.79595 | gap 3, opp_overlap 1358529 GTCAACCCATTGAAA TGCGCGGAAGTG-T-ACTTT GTTCA AAAGTTAACACC-CCGCGCA TTTTTTGTTTTGCGG MADE_01261 1358688 - 1358515 - | hypothetical protein TERM 1391 1358772 - 1358753 - H 100 -5.7 -5.7946 | CGTGCAATAAAAAAA CGTCTGA TAAAGC CCAGACG TGCCCTCACTGCGGT MADE_01262 1358917 - 1359042 + | hypothetical protein MADE_01263 1359043 - 1359336 + | hypothetical protein TERM 1392 1359929 - 1359917 - g 77 -6.9 -4.37886 | GTAGCGGCGATAAAA GACGC TCA GCGCC GCCCCGTGGAGCTTA TERM 1393 1360478 - 1360462 - g 75 -6.5 -4.4727 | GCAATATGGACAAAA GCTGCTT ATT AAGCTGC AAACGTTAGAAGATA MADE_01264 1359326 - 1362232 + | hypothetical protein MADE_01265 1362233 - 1362451 + | putative orphan protein TERM 1394 1362498 - 1362477 - T 100 -15.9 -4.67563 | opp_overlap 1362477 1362495 TAACACAAACTAAAA GGGCCAGAC ATAT GTCTGGCCC TTTGGCGATAAAGTG TERM 1395 1362477 - 1362498 + T 100 -15.9 -3.57462 | opp_overlap 1362477, overlap 1362495 TAACACAAACTAAAA GGGCCAGAC ATAT GTCTGGCCC TTTGGCGATAAAGTG MADE_01266 1362712 - 1362518 - | hypothetical protein MADE_01267 1362927 - 1362751 - | hypothetical protein TERM 1396 1363373 - 1363357 - g 73 -10.9 -2.50966 | overlap 1363356 1363360 ATTTAACGAAGACAT CAACCCT GAT AGGGTTG CGGCAATGGCTATCT MADE_01268 1363184 - 1363837 + | hypothetical protein MADE_01269 1364448 - 1363873 - | hypothetical protein TERM 1397 1364084 - 1364104 + g 72 -9.1 -3.61894 | CATTGTCTATCAATT TGAAAAGCT GCC GGCTTTTCA TTATTAGCCACAATT MADE_01270 1364708 - 1364475 - | hypothetical protein TERM 1398 1364511 - 1364531 + g 74 -5.4 -4.564 | CGCGGTTCTGCCTAG CGCCATCA TGGCC TGATTGCG TTTTGCTTTAGGCTT MADE_01271 1365304 - 1364792 - | hypothetical protein MADE_01272 1365637 - 1365308 - | hypothetical protein MADE_01273 1367934 - 1365826 - | putative two-component sensor histidine kinase and response regulator hybrid TERM 1399 1366168 - 1366183 + g 75 -6.1 -4.431 | opp_overlap 1366155, overlap 1366177 AATGCGCTTATGTTT TGGCG CAGCCT CGCCA TTTTCTGGGTGAGTA TERM 1400 1367410 - 1367399 - G 71 -7.2 -4.07687 | AGCTCCTGTTGAAAA GCGC TGTT GCGC GCGTCATCAATAAGG MADE_01274 1368399 - 1367947 - | putative two-component response regulator MADE_01275 1369900 - 1368389 - | putative two-component sensor histidine kinase MADE_01276 1370129 - 1369905 - | putative orphan protein MADE_01277 1371480 - 1370149 - | putative sigma-54 interacting response regulator protein MADE_01278 1371995 - 1372573 + | probable exopolysaccharide synthesis protein MADE_01279 1373519 - 1372596 - | putative transcriptional regulator with periplasmic binding protein domain (LysR family) MADE_01280 1373924 - 1373571 - | hypothetical protein TERM 1401 1374261 - 1374251 - g 71 -6.8 -4.04209 | TTAAAGGAGGAGAAA TCGG TAA CCGA GCTGCTTGAGGTCGT MADE_01281 1374170 - 1374433 + | transcriptional regulator, ArsR family protein TERM 1402 1374487 - 1374454 - T 82 -11.1 -3.53012 | opp_overlap 1374455, overlap 1374455 TTCTTCCTTTCTAAA GTGCAATGTCCGCCT TAGC AAACGGACATTGCAT TATCTATCAGCATGA TERM 1403 1374486 - 1374455 - T 95 -14.6 -2.71712 | opp_overlap 1374455, overlap 1374454 TCTTCCTTTCTAAAG TGCAATGTCCGCCT TAGC AAACGGACATTGCA TTATCTATCAGCATG TERM 1404 1374455 - 1374486 + T 79 -10.3 -3.59202 | opp_overlap 1374455 1374454 TCTTCCTTTCTAAAG TGCAATGTCCG CCTTAGCAAA CGGACATTGCA TTATCTATCAGCATG MADE_01282 1375269 - 1374520 - | hypothetical protein TERM 1405 1375450 - 1375421 - R 100 -14.5 -4.11216 | opp_overlap 1375428, overlap 1375428 TTTCGAGTCGTAAAA CAAAAAAGCTCGC CGGA GCGAGCTTTTTTA AGAGGGTCAAATGAT TERM 1406 1375443 - 1375428 - R 100 -10.4 -5.79595 | opp_overlap 1375428, overlap 1375421 TCGTAAAACAAAAAA GCTCGC CGGA GCGAGC TTTTTTAAGAGGGTC TERM 1407 1375428 - 1375443 + r 93 -10.4 -5.0133 | opp_overlap 1375428 1375421 TCGTAAAACAAAAAA GCTCGC CGGA GCGAGC TTTTTTAAGAGGGTC MADE_01283 1376712 - 1375465 - | transposase TERM 1408 1376041 - 1376067 + g 72 -2.8 -4.98522 | TTGCCACTGGGCTTT GGCGATGGGTCG AAG CAGCTCAATGCC TTTTTGTATCCAGTT MADE_01284 1377071 - 1376736 - | Transposase and inactivated derivative MADE_01285 1377355 - 1377071 - | hypothetical protein MADE_01286 1378428 - 1377394 - | putative lipopolysaccharide modification acyltransferase MADE_01287 1379885 - 1378476 - | hypothetical transposase TERM 1409 1380272 - 1380287 + H 71 -4.8 -4.48987 | TGCCCAGATTAGTTG TTTTAG TTCG CTAAAA TTTTCATTATAAAGG TERM 1410 1380828 - 1380838 + G 72 -2.6 -5.06414 | TGCCGCGTCATTATG TATT TTC AATA TTTTTCTTGCACGGC MADE_01288 1380310 - 1381857 + | hypothetical protein MADE_01289 1381915 - 1382502 + | glycosyl transferase family protein MADE_01290 1382561 - 1382719 + | glycosyl transferase MADE_01291 1383089 - 1382961 - | hypothetical protein MADE_01292 1383124 - 1383306 + | hypothetical protein TERM 1411 1383625 - 1383641 + G 76 -4.4 -4.93547 | ATTGTTTATTATAGG CAGGAG TATTT CTTCTG TTTTTACTTCATTGG MADE_01293 1383296 - 1384903 + | hypothetical protein MADE_01294 1384998 - 1386239 + | hypothetical protein MADE_01295 1386425 - 1387582 + | secreted polysaccharide polymerase MADE_01296 1387744 - 1388808 + | glycosyltransferase TERM 1412 1389118 - 1389132 + G 82 -5.6 -5.17054 | TGTTTTTTGACGAGC CGCGAG TTG CTCCCG TTTTTTACATATTGT TERM 1413 1389506 - 1389518 + G 78 -4.8 -4.9725 | TAAGCTTGGAACCAC CGCA CAAGT TGCG TTTTTCTCTCGAGGT MADE_01297 1388805 - 1390256 + | Polysaccharide biosynthesis protein MADE_01298 1390259 - 1391344 + | predicted glycosyltransferase MADE_01299 1392440 - 1391313 - | putative glycosyltransferase TERM 1414 1391638 - 1391615 - G 71 -7.5 -4.00445 | opp_overlap 1391615 TACTAGGAATAAGAA CAGCATTTG ATGCAG CAAATGCCG GTTTTGTGTTAGTTA TERM 1415 1391680 - 1391690 + g 74 -5.4 -4.7173 | AAAATAAAGTATTCG GCTA ATT TAGC TTTTTCAATCTGCTC MADE_01300 1393752 - 1392448 - | hypothetical protein MADE_01301 1394783 - 1393752 - | hypothetical protein TERM 1416 1394045 - 1394034 - G 73 -4.4 -4.87592 | CCATAGATAATAAAA CCTT TGGT AAGG ATGACGAGTTACTGC TERM 1417 1394203 - 1394179 - G 74 -3.6 -5.00616 | gap 1, opp_overlap 1394183 1394183 TTGTTTGTTAAAAAA GAAGCCC-AGA CATC TCTTGGGTTTC GGTATAGGTGAATTA MADE_01302 1395859 - 1394780 - | glycosyl transferase, group 1 family protein TERM 1418 1395214 - 1395244 + g 70 -2 -5.03145 | gap 1, opp_overlap 1395215 1395218, overlap 1395214 1395215 1395218 CGTCACCTACGATAA G-TAATTTGGTGT CAGGGA ACTCCAAATTAAC TTTTTTAAAGGCTTC MADE_01303 1397781 - 1395883 - | Asparagine synthase, glutamine-hydrolyzing TERM 1419 1396161 - 1396180 + g 79 -2 -5.5604 | opp_overlap 1396161 GAATAAACGGAACGA GCGCTTCT TTCA AAATGCGC TTTTTTATTCCTTCG TERM 1420 1397320 - 1397347 + g 78 -6.4 -4.65895 | gap 1, opp_overlap 1397312 GGCAAACGCAAACCG GCCATCTTTACTA AAG TAGTAAAGC-GGC TTTTTGCCTAAGCGA MADE_01304 1398867 - 1397794 - | hypothetical protein MADE_01305 1399883 - 1398882 - | WalW protein MADE_01306 1400987 - 1399887 - | Glycosyl transferase, group 1 MADE_01307 1401973 - 1400993 - | dolichyl-phosphate mannose synthase related protein MADE_01308 1404459 - 1401955 - | hypothetical protein TERM 1421 1403248 - 1403259 + g 85 -7.2 -4.92757 | overlap 1403244 AAAAAAACTATTGTT GCCG TCAA CGGC TTTTCTTATTAATGA MADE_01309 1405562 - 1404456 - | hypothetical protein TERM 1422 1406411 - 1406429 + G 74 -6 -4.68655 | AAAGAGCTATATCGA GAAAGTTG AAG CACCTTTC TTTCTTTTCCCATTA TERM 1423 1407671 - 1407659 - g 72 -4.7 -4.60797 | GTCTTATATAGAAAA CCGCC TTT GGCTG AATACGCTAATCGAG TERM 1424 1408110 - 1408098 - g 72 -6.3 -4.2416 | CAACTTAATAAAGAA TCAGA ACC TCTGA CAGGACTAAATGCTC MADE_01310 1405908 - 1408589 + | TPR domain protein TERM 1425 1408759 - 1408747 - g 81 -3.4 -5.30575 | opp_overlap 1408747 GAAAAACGTAAAAAA TGCA TTATC TGCA CTTGCTCTAATGAGC TERM 1426 1408972 - 1408960 - g 76 -9.1 -3.66772 | opp_overlap 1408968 CGAAAGTTCTAACAA CGGTG TAA CACCG GGGCAAGGTGTACTT TERM 1427 1409107 - 1409124 + G 72 -2.7 -4.9218 | overlap 1409108 TGGCTTGGTACCTCA GCAAAAC GGTA GTTTTGA TTTTTCTAATGGCTG MADE_01311 1408730 - 1409566 + | hypothetical protein TERM 1428 1409588 - 1409573 - f 79 -9 -3.81027 | CGTAAGTAATGTAAA GCACTG CAGA CAGTGC GAAAGATGAAAGTGT TERM 1429 1409628 - 1409610 - f 100 -14.6 -3.7795 | opp_overlap 1409610, overlap 1409600 TGAAAGTGTATTAAA CGCCCAAC GGA GTTGGGCG TTTTTTTGTCAGTAG TERM 1430 1409610 - 1409628 + F 100 -14.6 -5.64274 | opp_overlap 1409610 1409600 TGAAAGTGTATTAAA CGCCCAAC GGA GTTGGGCG TTTTTTTGTCAGTAG MADE_01312 1410072 - 1410299 + | putative orphan protein; putative transposase (IS66 family element,Orf2-like) TERM 1431 1410477 - 1410462 - g 78 -5.4 -4.76041 | overlap 1410463 1410464 TATAGGCAGGAAAAA CTGGCT GTTT AGCCAA ACTGCCTCACGCGCA MADE_01313 1410376 - 1410642 + | putative transposase (IS66) MADE_01314 1411672 - 1410809 - | hypothetical protein MADE_01315 1412478 - 1411729 - | hypothetical protein TERM 1432 1411914 - 1411902 - G 71 -7.7 -3.87869 | opp_overlap 1411865 CTAACTCGTTAGAAA CACGT AGA ACGTG AGTGGCGCTTGTTAC TERM 1433 1412369 - 1412379 + g 73 -4 -4.86216 | GACGCACAAGCAAGC TTAG ACG CTAA TTTCTTATTTTTTAT MADE_01316 1412833 - 1413675 + | hypothetical protein MADE_01317 1413798 - 1413941 + | hypothetical protein MADE_01318 1414178 - 1414789 + | HPr kinase MADE_01319 1414786 - 1415871 + | hypothetical protein MADE_01320 1417502 - 1415865 - | FAD-binding protein TERM 1434 1415952 - 1415967 + g 72 -2.6 -4.93661 | overlap 1415954 1415963 TGTTGACCAGAATGC TTTTGA CGTA TCAAGA TTTTCTTGTTGCTCT MADE_01321 1417564 - 1418580 + | capsular polysaccharide biosynthesis protein I MADE_01322 1419504 - 1418614 - | Patatin MADE_01323 1419531 - 1419644 + | hypothetical protein TERM 1435 1419766 - 1419738 - T 93 -8.2 -5.5112 | gap 1, opp_overlap 1419738 TTGATTAATAAAAAA GCCCACCC-CTAT TTAA ACAGCGGGTGAGC TTGATTTGTGTGGTA MADE_01324 1422005 - 1419810 - | malate synthase TERM 1436 1420943 - 1420965 + g 79 -10.6 -3.53343 | CAAAAAGCATGGCGT CGTTGGTCAT AAG GTGACCGACG TTTCGAACGAACATT MADE_01325 1423048 - 1422104 - | transcriptional regulator, LysR family protein TERM 1437 1423282 - 1423265 - R 100 -12.7 -5.08011 | AAAAGGCGTAAAAAA GGGCACC CGAA GGTGCCC TGTAGGAAAGGTTGG MADE_01326 1424926 - 1423331 - | isocitrate lyase TERM 1438 1424661 - 1424679 + g 77 -3.9 -5.15634 | overlap 1424652 CTGGTTGTACCTTGG TGCTTTT TAACT GAAAGCA TTTTTTGCTGGCCTA TERM 1439 1425549 - 1425530 - g 73 -4.2 -4.85599 | GTCAGGCTATAAAAA TTCGAGGG GGAG CCACCGAA GACACCGCTAAGAAT MADE_01327 1425286 - 1426245 + | chemotaxis protein CheV TERM 1440 1426398 - 1426408 + F 72 -3.2 -5.1287 | opp_overlap 1426383 1426381 TCACAAAATTATTCG CGAT AGT GTCG TTTTTTGCATCTAGA MADE_01328 1426470 - 1427936 + | alkaline phosphatase TERM 1441 1428016 - 1428049 + F 86 -7.5 -5.10064 | opp_overlap 1428016 1428020 CTGTAATCGATTGAA TAAAGCGCCAATGTT TTTT AAAGCTGGCGCTTTA TTTTTATCTGTTGGG MADE_01329 1428085 - 1429005 + | glutaminase MADE_01330 1430406 - 1429054 - | predicted secreted hydrolase MADE_01331 1433192 - 1430403 - | hypothetical protein TERM 1442 1431177 - 1431131 - G 100 -16.1 -4.52589 | gap 1, opp_overlap 1431140 GTGTGGTAGATAAAA TGTCGGAAACCTCCTCCAAAGC GCCC GGTTTGGAGGAGGTTTGCG-CA AAGCTCGCAGAGGAA TERM 1443 1431140 - 1431169 + g 100 -15.1 -3.53444 | opp_overlap 1431131 ATAAAATGTCGGAAA CCTCCTCCAAAGC GCCC GGTTTGGAGGAGG TTTGCGCAAAGCTCG MADE_01332 1433940 - 1433248 - | ABC transporter, nucleotide binding/ATPase protein TERM 1444 1434100 - 1434086 - R 95 -8.5 -5.45652 | opp_overlap 1434086 ATTGGCAATAAAAAA GGGGC TTACC GCCCC TTATCATTATTTGAA TERM 1445 1434086 - 1434100 + r 73 -8.5 -3.65135 | opp_overlap 1434086 ATTGGCAATAAAAAA GGGGC TTACC GCCCC TTATCATTATTTGAA MADE_01333 1434818 - 1434117 - | Dihydroorotate dehydrogenase 2 MADE_01334 1435404 - 1434865 - | Rhomboid-like protein MADE_01335 1436582 - 1435425 - | putative glutathionylspermidine synthase MADE_01336 1437262 - 1436594 - | predicted integral membrane protein MADE_01337 1437689 - 1437273 - | hypothetical protein MADE_01338 1438350 - 1437706 - | hypothetical protein MADE_01339 1439418 - 1438363 - | Kef-type K+ transport system, predicted NAD-binding component TERM 1446 1439035 - 1439010 - G 73 -10.5 -2.99325 | gap 1, opp_overlap 1439010 1439013 1439022, overlap 1439009 1439013 CTTGCAGAATTAAAT CAAGCAGCAGCA TGG TGC-GCTGCTCG TTCCATCCTATTACT TERM 1447 1439533 - 1439559 + r 71 -5.1 -4.4959 | opp_overlap 1439528 1439537, overlap 1439535 1439537 TTGTAACAAGCATTA AAAATGGGAGC ACTGG GCTCCCATGTG TTTTACTTACTTGCC TERM 1448 1439535 - 1439557 + r 73 -7.7 -3.85043 | opp_overlap 1439528 1439537, overlap 1439533 1439537 GTAACAAGCATTAAA AATGGGAGC ACTGG GCTCCCATG TGTTTTACTTACTTG TERM 1449 1439537 - 1439555 + r 79 -10.3 -3.49321 | opp_overlap 1439528 1439537, overlap 1439535 1439533 AACAAGCATTAAAAA TGGGAGC ACTGG GCTCCCA TGTGTTTTACTTACT TERM 1450 1439555 - 1439537 - R 93 -10.3 -4.83593 | opp_overlap 1439537 1439535 1439533, overlap 1439528 AACAAGCATTAAAAA TGGGAGC ACTGG GCTCCCA TGTGTTTTACTTACT MADE_01340 1440246 - 1439566 - | Phage shock protein A (IM30), suppresses sigma54-dependent transcription TERM 1451 1439734 - 1439750 + g 81 -8.7 -4.45399 | opp_overlap 1439734 1439736, overlap 1439730 ATCTTGAATACGAGA CAGCGAC TCT GTTGCTG TTTTCATCTTACTAT MADE_01341 1440659 - 1440270 - | hypothetical protein MADE_01342 1440931 - 1441197 + | GMP synthase, PP-ATPase domain/subunit i MADE_01343 1441210 - 1441323 + | hypothetical protein TERM 1452 1441320 - 1441301 - f 100 -12.2 -5.71712 | GTGCAGATAAAAAAA TACCCAGC AAGT GCTGGGTA TGAATGATAAGGAAT TERM 1453 1442628 - 1442593 - g 83 -10.6 -3.72592 | opp_overlap 1442591 1442605 1442623 1442625 AATGCCTATCAAGAA GCGATAGCGAAAGAAT ACCG ATTCTTTAGCTATGGC GATGCTATGTTTATT MADE_01344 1441609 - 1442655 + | S-adenosylmethionine:tRNA ribosyltransferase-isomerase TERM 1454 1442754 - 1442715 - f 85 -6.6 -5.06451 | overlap 1442716 1442717 TACGACGTTAAAAAA CCGTTGCGATTTCG GTTAACTCGTTT CGAAATCGCAACAA ACCCATTGAGGTTTG TERM 1455 1442753 - 1442716 - f 70 -7.9 -3.63148 | overlap 1442715 1442717 ACGACGTTAAAAAAC CGTTGCGATTTCG GTTAACTCGTTT CGAAATCGCAACA AACCCATTGAGGTTT TERM 1456 1442991 - 1443001 + F 71 -6.8 -4.00532 | opp_overlap 1442982, overlap 1442982 ACCGAAGGCCGAGCA CGAC GCG GTCG TTTGGTGTTTGAACG TERM 1457 1443537 - 1443525 - g 73 -7.7 -4.08064 | AAGGCGTGGTGAAAA TTCGC AAT GCGAA ACACAGGAACGACAC MADE_01345 1443149 - 1443787 + | queuine tRNA-ribosyltransferase MADE_01346 1443812 - 1444150 + | putative preprotein translocase IISP family, membrane subunit TERM 1458 1444407 - 1444388 - g 88 -3.4 -5.72207 | opp_overlap 1444391, overlap 1444391 GCTAAACGAAAAAAA CATCTCGC CGAA GCGTGTTG AGTTTGAGAACGACC MADE_01347 1444251 - 1446050 + | protein export protein SecD MADE_01348 1446061 - 1447002 + | protein-export membrane protein SecF TERM 1459 1447070 - 1447041 - T 77 -9.4 -3.53298 | opp_overlap 1447047, overlap 1447047 ATTACGTTAAATGAA TAAAAAGCCGCA CAGTGT TGCGGCTTTTTT GTAGGTGTGAATCAC TERM 1460 1447047 - 1447064 + T 93 -8.4 -5.29782 | opp_overlap 1447041 1447047 TTAAATGAATAAAAA GCCGCA CAGTGT TGCGGC TTTTTTGTAGGTGTG TERM 1461 1447064 - 1447047 - T 93 -8.4 -5.24551 | opp_overlap 1447047, overlap 1447041 TTAAATGAATAAAAA GCCGCA CAGTGT TGCGGC TTTTTTGTAGGTGTG MADE_01349 1447998 - 1447114 - | regulatory protein TERM 1462 1448122 - 1448101 - H 71 -5.2 -4.57569 | gap 1, overlap 1448106 TCACGTTGCTAAAAA TTGAAGGCG CTTTT CGCCT-CAA TAAGGGACAAGATGA TERM 1463 1448845 - 1448884 + G 75 -10 -3.55889 | gap 1 GTGCAATTTTGGGGG TGGCTA-CGCGATAGGCGC GGG GCGCTGATTGCGTTCGCCA TTATACTTACTCTGT MADE_01350 1448242 - 1449351 + | hypothetical protein TERM 1464 1449417 - 1449453 + T 100 -15.3 -4.74653 | opp_overlap 1449417 1449423, overlap 1449423 ATGAGGTACAAAAAG CAAAAAGGCGCGAATTA AAA TAATTCGCGCCTTATCG TTTATTTGTTCGTTT TERM 1465 1449453 - 1449417 - T 100 -17.5 -3.52519 | opp_overlap 1449417 1449423, overlap 1449423 ATGAGGTACAAAAAG CAAAAAGGCGCGAATTA AAA TAATTCGCGCCTTATCG TTTATTTGTTCGTTT TERM 1466 1449423 - 1449447 + T 100 -17.3 -3.73146 | opp_overlap 1449423 1449417, overlap 1449417 TACAAAAAGCAAAAA GGCGCGAATTA AAA TAATTCGCGCC TTATCGTTTATTTGT TERM 1467 1449447 - 1449423 - T 100 -17.3 -5.2197 | opp_overlap 1449417 1449423, overlap 1449417 TACAAAAAGCAAAAA GGCGCGAATTA AAA TAATTCGCGCC TTATCGTTTATTTGT MADE_01351 1450311 - 1449544 - | inositol-1-monophosphatase TERM 1468 1449815 - 1449834 + g 71 -3.6 -4.85782 | gap 1 TTGTTCAGACTAAGT GC-GTATTC ACC GAATGCAGC TTTGTTTTTGAACGG TERM 1469 1450870 - 1450852 - g 71 -10.2 -2.60723 | opp_overlap 1450850 1450847, overlap 1450851 TGATGGCCAAGCAAG CGCGCTTG CTG CAGGCGCG GGTGATGTACTCGCG MADE_01352 1450712 - 1451497 + | putative tRNA/rRNA methyltransferase (trmH family) protein MADE_01353 1451503 - 1452327 + | serine acetyltransferase TERM 1470 1452692 - 1452676 - g 91 -8 -5.19879 | TTGGAAAGAGAAAAA GGCCAT TGCAG ATGGCC GCTCGATAAAAGCTT MADE_01354 1452449 - 1453924 + | putative aromatic-ring hydroxylase MADE_01355 1454070 - 1454555 + | transcriptional regulator, BadM/Rrf2 family MADE_01356 1454574 - 1455740 + | cysteine desulfurase MADE_01357 1456085 - 1457521 + | Cysteine desulfurase activator SufB MADE_01358 1457555 - 1458286 + | Cysteine desulfurase activator ATPase TERM 1471 1458426 - 1458399 - g 74 -8.4 -3.86897 | gap 1, overlap 1458404 GCCAGCGCGCAGAAA CGAAAGCTGGCGC TTT ACGCC-GCTTACG CCAATTGAAAAGCGT TERM 1472 1458685 - 1458697 + G 79 -4.1 -5.19251 | overlap 1458682 GTAAACGATGCGCTA TGCCA ACA TGGTA TTTTTATTAATGTTG MADE_01359 1458283 - 1459539 + | Cysteine desulfurase activator SufB MADE_01360 1459536 - 1460753 + | Selenocysteine lyase/Cysteine desulfurase MADE_01361 1460763 - 1461119 + | Fe-S cluster assembly scaffold protein MADE_01362 1461171 - 1461704 + | predicted metal-sulfur cluster enzyme MADE_01363 1461772 - 1462182 + | Cysteine desulfurase SufE subunit MADE_01364 1462462 - 1462893 + | nucleoside diphosphate kinase TERM 1473 1462907 - 1462940 + F 74 -9 -3.53012 | opp_overlap 1462915, overlap 1462915 AAGAATACGCTGGTA GGAAAAAACGAGGC CTTAGC GCCTCGTTTTTTTG TTTGCCCAGCGAAGC TERM 1474 1462915 - 1462932 + F 100 -8.4 -5.95539 | opp_overlap 1462915, overlap 1462907 GCTGGTAGGAAAAAA CGAGGC CTTAGC GCCTCG TTTTTTTGTTTGCCC TERM 1475 1462932 - 1462915 - f 90 -8.4 -5.14563 | opp_overlap 1462907 1462915 GCTGGTAGGAAAAAA CGAGGC CTTAGC GCCTCG TTTTTTTGTTTGCCC MADE_01365 1463287 - 1463448 + | hypothetical protein TERM 1476 1464489 - 1464466 - g 72 -5.4 -4.48877 | gap 1, opp_overlap 1464469, overlap 1464468 1464470 TAAACACGGAGAAAA CACACATCACT CAC AGTGATG-ATG GTGTGAAGTTCCTTG TERM 1477 1464486 - 1464470 - g 75 -9.5 -3.49186 | opp_overlap 1464469, overlap 1464466 1464468 CACGGAGAAAACACA CATCACT CAC AGTGATG ATGGTGTGAAGTTCC TERM 1478 1464762 - 1464752 - g 84 -8.2 -4.68424 | CAAGTTATGGAAAAA GGCG AGC CGCC TCCATCGCTGGCTAA MADE_01366 1463676 - 1464947 + | hypothetical maturase MADE_01367 1465007 - 1465126 + | hypothetical protein MADE_01368 1465384 - 1466502 + | putative FeS redox enzyme MADE_01369 1466581 - 1466778 + | hypothetical protein MADE_01370 1467762 - 1466833 - | uridylyltransferase TERM 1479 1467972 - 1468009 + r 85 -9.2 -4.24342 | gap 1, opp_overlap 1467978 1467979, overlap 1467975 1467979 AGGCGGGGGAGAGTA GAACAAG-GCGGTAGCC ATTAG GGCTACCGCTCATATTC TTTATTGATAAAGGA TERM 1480 1468002 - 1467978 - R 90 -11.4 -3.87104 | opp_overlap 1467975 1467972 1467979, overlap 1467979 GGGAGAGTAGAACAA GGCGGTAGCC ATTAG GGCTACCGCT CATATTCTTTATTGA TERM 1481 1468001 - 1467979 - R 95 -14.9 -2.9178 | opp_overlap 1467975 1467972 1467979, overlap 1467978 GGAGAGTAGAACAAG GCGGTAGCC ATTAG GGCTACCGC TCATATTCTTTATTG TERM 1482 1467979 - 1468001 + r 100 -14.9 -2.94103 | opp_overlap 1467979 1467978, overlap 1467975 1467972 GGAGAGTAGAACAAG GCGGTAGCC ATTAG GGCTACCGC TCATATTCTTTATTG MADE_01371 1468827 - 1468033 - | methionine aminopeptidase; contains a divalent metal, usually cobalt TERM 1483 1469709 - 1469694 - g 76 -7.6 -4.34223 | AAGCTAACTAAGAAA GAAGCA CTTA TGCTTC AGCGCGAAATGGACA MADE_01372 1469376 - 1470029 + | ribosomal protein S2 TERM 1484 1470093 - 1470108 + F 95 -11.8 -4.18197 | opp_overlap 1470087 CGAAACGTATTGAGA GGGGCG GCAT CGCCCC TTTTACCTAACGAAT MADE_01373 1470152 - 1471024 + | elongation factor Ts TERM 1485 1471089 - 1471072 - f 93 -11.3 -4.19307 | opp_overlap 1471072 TAGATAAACTACAAA GCACCTC TTTT GAGGTGC TTTTTTATAGCTGTA TERM 1486 1471072 - 1471089 + F 100 -11.3 -5.29782 | opp_overlap 1471072 TAGATAAACTACAAA GCACCTC TTTT GAGGTGC TTTTTTATAGCTGTA TERM 1487 1471237 - 1471180 - f 86 -10.1 -3.9941 | opp_overlap 1471170 1471180 1471180, overlap 1471181 TGCCTGACAACGAAA GCGCTTTGTCCTATGTTTTTTAACTCA GTAA TGTATTGAAAGACATAGGACAAAACGG GTTTACGAGGACATT TERM 1488 1471180 - 1471237 + F 72 -10.1 -2.72043 | opp_overlap 1471180 1471181, overlap 1471170 1471180 TGCCTGACAACGAAA GCGCTTTGTCCTATGTTTTTTAACTCA GTAA TGTATTGAAAGACATAGGACAAAACGG GTTTACGAGGACATT TERM 1489 1471236 - 1471181 - f 93 -13.6 -2.99325 | opp_overlap 1471170 1471180 1471180, overlap 1471180 GCCTGACAACGAAAG CGCTTTGTCCTATGTTTTTTAACTCA GTAA TGTATTGAAAGACATAGGACAAAACG GGTTTACGAGGACAT MADE_01374 1471323 - 1471526 + | uridylate kinase MADE_01375 1471529 - 1471996 + | uridylate kinase MADE_01376 1472020 - 1472577 + | ribosome releasing factor MADE_01377 1472587 - 1473372 + | undecaprenyl diphosphate synthase TERM 1490 1473470 - 1473484 + G 74 -7.1 -4.32402 | TAATTCTGGCGCCGC TGGCG CTCTA CGCCA TTCTTTTCCTTCCCA MADE_01378 1473427 - 1474290 + | phosphatidate cytidylyltransferase MADE_01379 1474290 - 1475477 + | 1-deoxy-D-xylulose 5-phosphate reductoisomerase MADE_01380 1475471 - 1476823 + | membrane-associated zinc metalloprotease, putative MADE_01381 1476882 - 1479359 + | outer membrane protein, OMP85 family MADE_01382 1479422 - 1479937 + | outer membrane protein, OmpH family TERM 1491 1479963 - 1480001 + F 85 -6.7 -5.09426 | opp_overlap 1479964 1479967, overlap 1479967 TAAACCGTTGAGAAA TTGATCAGGCCAACCCC CAAAA GGTGTTGGTCTGATTTG TTTTTTGCGCTTAAC TERM 1492 1479997 - 1479967 - f 72 -10.4 -2.70354 | opp_overlap 1479963 1479967, overlap 1479964 CCGTTGAGAAATTGA TCAGGCCAACCCCC AAA AGGTGTTGGTCTGA TTTGTTTTTTGCGCT TERM 1493 1479967 - 1479997 + F 100 -11.9 -5.05153 | opp_overlap 1479967 1479964, overlap 1479963 CCGTTGAGAAATTGA TCAGGCCAACCCC CAAAA GGTGTTGGTCTGA TTTGTTTTTTGCGCT MADE_01383 1480107 - 1480580 + | 3-hydroxymyristol acyl carrier protein dehydratase MADE_01384 1480582 - 1481352 + | UDP-N-acetylglucosamine acyltransferase TERM 1494 1481475 - 1481439 - g 72 -6.7 -4.2349 | gap 1, overlap 1481470 GTTGCAGAGCTAAAA CGCCAATACC-CAGAT GCTATA ATCGAAGGTATTGGCG GTCCAAATATGATAG TERM 1495 1481496 - 1481525 + G 77 -10.2 -3.45054 | gap 1, opp_overlap 1481492 1481490 AATATGATAGACGCA GGTTTCCATAGTC TTTTC GAC-ATGGAAACC TTGTCAGTTATGGGG TERM 1496 1482267 - 1482287 + G 80 -6.8 -4.67234 | opp_overlap 1482266, overlap 1482269 ACTTACAAAATTATG CAGCGCTT ATATA AAGCGCCG TTTTTCACCTTACCT MADE_01385 1481355 - 1482503 + | tetraacyldisaccharide-1-P synthase TERM 1497 1482644 - 1482634 - g 91 -2.4 -5.81412 | CTCAGTGAAAAAAAA CGCG TCG CGCT TGCCCAAGAAATTCG MADE_01386 1482496 - 1483068 + | ribonuclease HII TERM 1498 1484083 - 1484073 - g 71 -6.8 -4.02021 | AAGTAATTAACCAAA TGGG TTT CCCA GGCTACTTCCTAATC TERM 1499 1486309 - 1486294 - g 76 -4.6 -5.00895 | GGCACGAGAGAAAAA CGCGAG AGCG CTGGCG ATAAATGTTGATACC MADE_01387 1483073 - 1486537 + | DNA polymerase III subunit alpha MADE_01388 1486621 - 1487562 + | acetyl-CoA carboxylase, carboxyl transferase, alpha subunit TERM 1500 1487621 - 1487661 + F 100 -14.1 -3.30159 | opp_overlap 1487627, overlap 1487622 GGCTAGCTTTATTCA TATCAAGGGGTTGGTTACC GAA GGTAATCAGCCCCTTGGCG TTATAAGACAATTAA TERM 1501 1487622 - 1487660 + F 95 -15.4 -2.57881 | opp_overlap 1487627, overlap 1487621 GCTAGCTTTATTCAT ATCAAGGGGTTGGTTACC GAA GGTAATCAGCCCCTTGGC GTTATAAGACAATTA TERM 1502 1487655 - 1487627 - f 86 -11.7 -3.2794 | opp_overlap 1487622 1487621 CTTTATTCATATCAA GGGGTTGGTTACC GAA GGTAATCAGCCCC TTGGCGTTATAAGAC MADE_01389 1487699 - 1489024 + | cell cycle protein MesJ TERM 1503 1489066 - 1489049 - T 88 -11.3 -3.767 | TACGTACTTACTAAA GCGGCAA TACA TTGCCGC TCCCTACAGGTAACG MADE_01390 1489991 - 1489092 - | diguanylate cyclase TERM 1504 1490935 - 1490947 + G 72 -4.7 -4.59109 | overlap 1490936 CTTCGGGCTGTCTAT GGCGC TTG GCGCA TTTTTAGCGGGTATG MADE_01391 1490021 - 1492183 + | Kef-type K+ transport system, membrane component TERM 1505 1492207 - 1492180 - T 73 -9.8 -3.25072 | overlap 1492183 GTTACTAGAAGGCAA CTAGCGCGCTTA CGGA TTAGCGCGCTGG CGGTGGAACTAGTGT TERM 1506 1492204 - 1492183 - T 73 -10.1 -2.80779 | overlap 1492180 ACTAGAAGGCAACTA GCGCGCTTA CGGA TTAGCGCGC TGGCGGTGGAACTAG MADE_01392 1492458 - 1492231 - | hypothetical protein MADE_01393 1492868 - 1493539 + | cytidine/deoxycytidylate deaminase family protein MADE_01394 1493765 - 1493610 - | hypothetical protein TERM 1507 1493858 - 1493834 - R 86 -10.7 -3.87994 | opp_overlap 1493835 1493836 1493838, overlap 1493835 ACGTATGTCGAGAAA GCGAGTCAGCC TTT GGCTGACTCAT TCTTAGGGTAGGCTA TERM 1508 1493857 - 1493835 - R 95 -14.2 -2.92475 | opp_overlap 1493835 1493836 1493838, overlap 1493834 CGTATGTCGAGAAAG CGAGTCAGCC TTT GGCTGACTCA TTCTTAGGGTAGGCT TERM 1509 1493835 - 1493857 + r 89 -12 -3.65224 | opp_overlap 1493835 1493834, overlap 1493836 1493838 CGTATGTCGAGAAAG CGAGTCAGCC TTT GGCTGACTCA TTCTTAGGGTAGGCT TERM 1510 1493836 - 1493856 + r 95 -15.5 -2.78813 | opp_overlap 1493835 1493834, overlap 1493835 1493838 GTATGTCGAGAAAGC GAGTCAGCC TTT GGCTGACTC ATTCTTAGGGTAGGC TERM 1511 1493838 - 1493854 + r 84 -12.3 -2.94045 | opp_overlap 1493835 1493834, overlap 1493836 1493835 ATGTCGAGAAAGCGA GTCAGCC TTT GGCTGAC TCATTCTTAGGGTAG MADE_01395 1495239 - 1493926 - | transglycosylase, SLT family protein TERM 1512 1494032 - 1494043 + g 76 -2.2 -5.40474 | TAGCCATAGCGGGTA GTGC GGTA GTAC TTTTTTTGACGCAAT TERM 1513 1494094 - 1494105 + g 71 -7.2 -4.10144 | opp_overlap 1494093, overlap 1494094 GTCAACCCAAAGATC GGGG TTAC CCCC TTGTTGTTCTGTTAA TERM 1514 1495834 - 1495802 - g 72 -8.6 -3.66995 | gap 1, opp_overlap 1495812 TCTAAAAAATATCAA TCG-TATAGAACGCG GTTG CGCGTTTTATATCGA GACCGACGCTACATT TERM 1515 1495812 - 1495823 + G 77 -7.2 -4.52589 | opp_overlap 1495802 ATCAATCGTATAGAA CGCG GTTG CGCG TTTTATATCGAGACC MADE_01396 1495494 - 1499381 + | Phophoribosylformylglycinamidine synthase (FGAM synthetase) TERM 1516 1499404 - 1499419 + T 91 -10.4 -4.50159 | opp_overlap 1499404, overlap 1499417 GGCTATTGAGTAAAA CAGGGG GAAA CCCCTG TTTATTTACCTTAAA TERM 1517 1499419 - 1499404 - T 89 -10.4 -4.2828 | opp_overlap 1499404 1499417 GGCTATTGAGTAAAA CAGGGG GAAA CCCCTG TTTATTTACCTTAAA TERM 1518 1499834 - 1499794 - T 100 -16.3 -5.27938 | opp_overlap 1499800, overlap 1499795 1499796 AGTCTGAAAGAAAAA TTCTAACGCCCGTATCAAG TCA CTTGATACGGGCGTTAATC ATTGGGGCTATTAAA TERM 1519 1499833 - 1499795 - T 100 -19.8 -3.75678 | opp_overlap 1499800, overlap 1499794 1499796 GTCTGAAAGAAAAAT TCTAACGCCCGTATCAAG TCA CTTGATACGGGCGTTAAT CATTGGGGCTATTAA TERM 1520 1499832 - 1499796 - T 100 -23.3 -2.84684 | opp_overlap 1499800, overlap 1499795 1499794 TCTGAAAGAAAAATT CTAACGCCCGTATCAAG TCA CTTGATACGGGCGTTAA TCATTGGGGCTATTA TERM 1521 1499800 - 1499828 + T 100 -21.9 -3.27476 | opp_overlap 1499796 1499795 1499794 AAAGAAAAATTCTAA CGCCCGTATCAAG TCA CTTGATACGGGCG TTAATCATTGGGGCT MADE_01397 1500525 - 1499938 - | Smr domain (Small MutS Related) containing protein MADE_01398 1500811 - 1500686 - | hypothetical protein TERM 1522 1501184 - 1501207 + r 90 -12.5 -3.71649 | opp_overlap 1501184 CACAAGCAAAAAAAA GCCCTGATG CAATGA CATCAGGGC TTTAAGGTTTAAACG TERM 1523 1501207 - 1501184 - R 100 -13.2 -5.98781 | opp_overlap 1501184 CACAAGCAAAAAAAA GCCCTGATGC AATG ACATCAGGGC TTTAAGGTTTAAACG MADE_01399 1501552 - 1501232 - | hypothetical protein MADE_01400 1503380 - 1501560 - | RTX toxin, putative TERM 1524 1502137 - 1502158 + g 74 -10.9 -2.86343 | overlap 1502133 GCTAATGTCCAGGTA CCGTTACCA TTAT TGGTAGCGG TGTAGTCATTCCCGT TERM 1525 1504918 - 1504930 + G 72 -9.1 -3.53343 | overlap 1504929 GGGTTAGGCTTTTGG CTGCC TCG GGCAG TTTGGCGCAAACATT MADE_01404 1504914 - 1505570 + | Thrombospondin type 3 repeat:OmpA/MotB TERM 1526 1505615 - 1505602 - g 70 -2.3 -4.99861 | opp_overlap 1505603, overlap 1505603 TATGAAGGATAAAAA GGTCG TACA CGACG TATCTTATTTAGAGC MADE_01405 1505588 - 1507672 + | ABC transporter, ATP-binding/permease protein MADE_01406 1508061 - 1508864 + | Transposase Tn3 MADE_01407 1509471 - 1509034 - | putative mercuric resistance operon coregulator MADE_01408 1511024 - 1509585 - | mercuric reductase MerA MADE_01409 1511464 - 1511045 - | putative mercury transport protein MADE_01410 1511748 - 1511464 - | periplasmic mercuric ion binding protein MerP TERM 1527 1511671 - 1511681 + g 78 -5.4 -4.8622 | overlap 1511660 CATCGTTGGCACTTC CAGT GTA ACTG TTTTTACTTCAGCAA MADE_01411 1512115 - 1511795 - | putative mercuric transport protein MADE_01412 1512785 - 1512333 - | Transcriptional regulator MerR TERM 1528 1513154 - 1513130 - g 91 -6.6 -5.52986 | gap 1, opp_overlap 1513130 1513146 AGCTCATTAAAAAAA TTCGTTT-CTG GCTT CAGCAAACGAA TTGCTTCTTTTTATA MADE_01413 1513055 - 1513678 + | resolvase, putative MADE_01414 1514366 - 1514650 + | hypothetical protein MADE_01415 1514650 - 1514985 + | Transposase and inactivated derivative TERM 1529 1515680 - 1515654 - gf 72 -2.8 -4.98522 | AACTGGATACAAAAA GGCATTGAGCTG CTT CGACCCATCGCC AAAGCCCAGTGGCAA TERM 1530 1516422 - 1516434 + GF 70 -9.1 -3.1876 | CTGATGGTGACTTGC CGCCT GCA AGGCG TTAATCCCTACCATT MADE_01416 1515009 - 1516586 + | transposase MADE_01417 1516558 - 1516953 + | hypothetical protein MADE_01418 1516974 - 1518350 + | Transposase Tn3 MADE_01419 1518371 - 1519033 + | riboflavin synthase subunit alpha MADE_01420 1519054 - 1520154 + | 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II, putative TERM 1531 1520549 - 1520535 - g 70 -10 -3.09556 | overlap 1520534 1520543 AAGCGGGCAATAAAG GTGCAG AAG CTGCAC TGGGCGCGCTTGAAA MADE_01421 1520312 - 1520599 + | 6,7-dimethyl-8-ribityllumazine synthase(riboflavin) MADE_01422 1520612 - 1521034 + | transcription antitermination protein NusB TERM 1532 1521226 - 1521237 + G 76 -4.4 -5.02074 | TACTGATACCCTTGT TGCA GGCG TGCA TTTTTTAAAAGATGC TERM 1533 1522005 - 1521980 - g 79 -9.9 -3.69354 | overlap 1521981 GGTCACAATGGCAAA CTCTCATTACT TAAA AGTAATGAGAA GTATACGCCTGTCGC TERM 1534 1522004 - 1521981 - g 74 -11.2 -2.81291 | overlap 1521980 GTCACAATGGCAAAC TCTCATTACT TAAA AGTAATGAGA AGTATACGCCTGTCG MADE_01423 1521083 - 1522048 + | thiamine monophosphate kinase MADE_01424 1522088 - 1522588 + | phosphatidylglycerophosphatase A TERM 1535 1522662 - 1522696 + T 100 -16.7 -3.98282 | gap 1, opp_overlap 1522670, overlap 1522670 TATCCGAGAATTTCT CAC-AAAAAGCCCGCA TGTT TGCGGGCTTTTTCGTG TTTAATTGATGTGGC TERM 1536 1522670 - 1522687 + T 100 -12.7 -4.946 | opp_overlap 1522670, overlap 1522662 AATTTCTCACAAAAA GCCCGCA TGTT TGCGGGC TTTTTCGTGTTTAAT TERM 1537 1522687 - 1522670 - T 100 -12.7 -4.84017 | opp_overlap 1522670 1522662 AATTTCTCACAAAAA GCCCGCA TGTT TGCGGGC TTTTTCGTGTTTAAT MADE_01425 1524599 - 1522722 - | 1-deoxy-D-xylulose-5-phosphate synthase TERM 1538 1524282 - 1524294 + g 71 -3.3 -4.83615 | opp_overlap 1524282 CGGCGGCCACGGAAA CGGAT GTA AACCG TTTTTCTGGCGAATG MADE_01426 1525522 - 1524632 - | geranyltranstransferase TERM 1539 1525411 - 1525423 + g 72 -9.1 -3.53444 | opp_overlap 1525405 1525402, overlap 1525402 CAGCAAGCAGCGCGT GACGC ATA GCGTC TTTCAGGCGCGGTGC MADE_01427 1525914 - 1525552 - | exodeoxyribonuclease VII small subunit TERM 1540 1526086 - 1526056 - H 72 -10.5 -2.69649 | opp_overlap 1526056, overlap 1526055 ATAGGGTTATAGAAG GTGTAGCTAGCGT ATTTA ACGCCACCTACAC TTCATAAAAAACAAA MADE_01428 1526205 - 1526966 + | flagellar motor protein MADE_01429 1526966 - 1527895 + | flagellar motor protein MADE_01430 1528053 - 1527922 - | hypothetical protein TERM 1541 1527951 - 1527972 + gT 100 -17.3 -4.70107 | opp_overlap 1527951 TAAATATAAACAAAA GCGGCGCTG AATT CAGCGCCGC TTTATTGTTTTGCTG TERM 1542 1527972 - 1527951 - GT 100 -17.3 -5.13648 | opp_overlap 1527951 TAAATATAAACAAAA GCGGCGCTG AATT CAGCGCCGC TTTATTGTTTTGCTG MADE_01431 1529239 - 1528007 - | Cyclopropane-fatty-acyl-phospholipid synthase TERM 1543 1528372 - 1528400 + gr 70 -8.1 -3.63922 | opp_overlap 1528371 1528395, overlap 1528371 1528373 1528399 GTCTGTCATCAATAG TGATGGACTGAAG GAG CATCAGACCATCG TCTTTTAAAAGCGAT TERM 1544 1528373 - 1528399 + gr 71 -9.4 -2.78032 | opp_overlap 1528371 1528395, overlap 1528372 1528371 TCTGTCATCAATAGT GATGGACTGAAG GAG CATCAGACCATC GTCTTTTAAAAGCGA TERM 1545 1528652 - 1528642 - GR 75 -8.2 -3.99324 | overlap 1528643 GCTTAGCAGCATAAA CGGC AAG GCCG CCCCACCCAGTGCCG TERM 1546 1529122 - 1529138 + gr 88 -8.7 -4.69656 | opp_overlap 1529121 TTTCTGTGCCAAACT TGGCGAT ATC GTCGCCA TTTTCTTGAATAGTT MADE_01432 1530009 - 1529266 - | hypothetical protein MADE_01433 1531271 - 1530006 - | putative dehydrogenase MADE_01434 1532002 - 1531283 - | Short chain dehydrogenase family protein MADE_01435 1532439 - 1531999 - | hypothetical protein MADE_01436 1532759 - 1533274 + | hypothetical protein MADE_01437 1533395 - 1534006 + | RNA polymerase sigma-70 factor MADE_01438 1533999 - 1534739 + | Transcription negative regulator ChrR TERM 1547 1534838 - 1534811 - T 91 -12.2 -4.08853 | opp_overlap 1534811 1534811 1534818, overlap 1534818 GTTAATACCAAACAA CAAAAAACGCAC CTAG GTGCGTTTTTTA GTTTCTGGTGTTAGC TERM 1548 1534811 - 1534839 + T 86 -9.8 -4.06384 | gap 1, opp_overlap 1534811 1534818, overlap 1534811 1534818 GTTAATACCAAACAA C-AAAAAACGCAC CTAG GTGCGTTTTTTAG TTTCTGGTGTTAGCA TERM 1549 1534811 - 1534838 + T 75 -10 -3.03348 | opp_overlap 1534811 1534818, overlap 1534811 1534818 GTTAATACCAAACAA CAAAAAACGCAC CTAG GTGCGTTTTTTA GTTTCTGGTGTTAGC TERM 1550 1534818 - 1534831 + T 93 -8.1 -5.42514 | opp_overlap 1534811 1534818, overlap 1534811 1534811 CCAAACAACAAAAAA CGCAC CTAG GTGCG TTTTTTAGTTTCTGG TERM 1551 1534831 - 1534818 - T 100 -8.1 -5.72254 | opp_overlap 1534818 1534811 1534811, overlap 1534811 CCAAACAACAAAAAA CGCAC CTAG GTGCG TTTTTTAGTTTCTGG MADE_01439 1535626 - 1534862 - | Competence lipoprotein ComL TERM 1552 1535945 - 1535934 - g 73 -4.4 -4.74103 | GTTCTAAGTTAAAAA CTTG GATC CAAG ATGGGAATGTTGCTG TERM 1553 1536563 - 1536575 + G 71 -7.7 -3.86015 | ATTAAGCATCCTTTG CTTGG CGA CCAAG TTTATGGCGGGCGTC MADE_01440 1535813 - 1536796 + | ribosomal large subunit pseudouridine synthase D MADE_01441 1536813 - 1537568 + | hypothetical protein MADE_01442 1537920 - 1540394 + | ClpB protein TERM 1554 1540420 - 1540438 + F 100 -6 -5.77677 | opp_overlap 1540420 ATTAATCATTACAAA GGCACT TCACTCC AGTGCC TTTTTTATTGTTTTG MADE_01443 1540517 - 1542220 + | D-lactate dehydrogenase, FAD protein, NADH independent TERM 1555 1542250 - 1542232 - T 90 -11 -4.22927 | opp_overlap 1542234 TTAGCAAGAGATAAA GAGAGCCC TAT AGGCTCTC TAATAATGCTCTAGC MADE_01444 1545052 - 1542239 - | TPR repeat protein TERM 1556 1542628 - 1542613 - G 72 -9 -3.61398 | opp_overlap 1542611 1542606 TCGGCTCCTCAATAA GCGCTT TATA AAGCGC TATCGATTCGTCAAA TERM 1557 1544123 - 1544110 - G 76 -8.1 -4.0371 | GACCGCTTATATAAA GCAGC ATAG GCTGC GAGGTTATAAGCTCA TERM 1558 1544436 - 1544450 + g 73 -10 -3.32521 | AGTTGCCCTTTCAAG CGCCAT GTT ATGGCG TTCTCAGGCTCTAGT MADE_01445 1545189 - 1545073 - | hypothetical protein TERM 1559 1545120 - 1545105 - GR 100 -10.4 -5.70829 | opp_overlap 1545105 AATAGCATAAAAAAA GGTGGC CTAA GCCACC TTCTAAAGATACGTG TERM 1560 1545105 - 1545120 + gr 77 -10.4 -3.31461 | opp_overlap 1545105 AATAGCATAAAAAAA GGTGGC CTAA GCCACC TTCTAAAGATACGTG MADE_01446 1546009 - 1545158 - | hypothetical protein TERM 1561 1546126 - 1546149 + r 76 -11.1 -2.64243 | opp_overlap 1546126 AGGTAGTAAAAAAAA CTGACAGGT CGTACC ACCTGTCAG TGATCTAAAGTCTAA TERM 1562 1546149 - 1546126 - R 100 -11.1 -5.86965 | opp_overlap 1546126 AGGTAGTAAAAAAAA CTGACAGGT CGTACC ACCTGTCAG TGATCTAAAGTCTAA MADE_01447 1547108 - 1546170 - | hypothetical protein TERM 1563 1547143 - 1547127 - H 80 -8 -4.36914 | TGCTTTCCTATAAAA GAAGCG CTTTT CGCTTC TAGTACATACTAAGA MADE_01448 1547493 - 1548290 + | CDP-diacylglycerol--serine O-phosphatidyltransferase, putative TERM 1564 1548421 - 1548436 + T 100 -10.4 -5.90231 | opp_overlap 1548421 CGTTTAGATTAAAAA GCGACC GAAA GGTCGC TTTTTTTATGTTTAT TERM 1565 1548436 - 1548421 - T 93 -10.4 -4.8048 | opp_overlap 1548421 CGTTTAGATTAAAAA GCGACC GAAA GGTCGC TTTTTTTATGTTTAT TERM 1566 1551273 - 1551261 - T 85 -9.1 -4.2354 | GAAAGGCGAAAAGAA CCCCT GTG AGGGG AGTGAAATAGAACCT TERM 1567 1552061 - 1552043 - T 74 -8.9 -3.54743 | overlap 1552056 CATGAGTAACGATAA TGGGAGT GAAAA ACTCCCA CGCCGGAAGACCAAG TERM 1568 1554053 - 1554032 - T 100 -14.5 -4.11216 | opp_overlap 1554032 TCCTTATTTCGAAAA GCCCTTGTC TTAC GACAAGGGC TTTTTCGTTAGGAAG TERM 1569 1554032 - 1554053 + T 100 -14.5 -4.8622 | opp_overlap 1554032 TCCTTATTTCGAAAA GCCCTTGTC TTAC GACAAGGGC TTTTTCGTTAGGAAG TERM 1570 1554164 - 1554179 + T 100 -11.8 -5.56264 | opp_overlap 1554164 TTTTGCACCACTAAA CCCGCC TAAC GGCGGG TTTTTTGTGTTTGGG TERM 1571 1554179 - 1554164 - T 89 -11.8 -3.78775 | opp_overlap 1554164 TTTTGCACCACTAAA CCCGCC TAAC GGCGGG TTTTTTGTGTTTGGG MADE_01449 1555952 - 1554213 - | acyl-CoA synthase TERM 1572 1554365 - 1554378 + g 72 -5.3 -4.72497 | opp_overlap 1554365 CTAGCTTAGACTTAA GATAC TCAC GTATC TTTTCTTCATCAATG TERM 1573 1554385 - 1554399 + g 72 -2.8 -4.97824 | TCACGTATCTTTTCT TCATCA ATG TGACGA TTTTCTTTAGCTTTT TERM 1574 1555018 - 1555031 + g 73 -2.4 -5.1356 | ATAGTTGGAACCCCA TGCA ACGCGG TGCA TTTTTCTTCCTCCAC MADE_01450 1556143 - 1556274 + | DNA polymerase II TERM 1575 1556270 - 1556250 - T 100 -14 -5.65513 | TATTAAGCAAAAAAA GCCCCGCT TAGTT AGCGGGGC ATAAAATCGGGAAAC MADE_01451 1556863 - 1556306 - | hypothetical protein MADE_01452 1559511 - 1557139 - | DNA polymerase II MADE_01453 1559538 - 1559678 + | hypothetical protein TERM 1576 1560230 - 1560194 - g 79 -12.3 -2.93382 | opp_overlap 1560193 GCTGACAGCGACAGA GGGCAACGGCTACAGCA GTG TAGTGTCGCCGTTACCC ATTAGCTATACCAGG MADE_01454 1559757 - 1560788 + | metallo-beta-lactamase family protein MADE_01455 1562167 - 1560857 - | sensor histidine kinase TERM 1577 1561074 - 1561062 - G 78 -4.8 -5.08824 | overlap 1561070 TTTGTAGTGAAAAAA GGCT CAAAC AGCC GCTTTCGGTGCTTAA TERM 1578 1561365 - 1561379 + g 71 -3.6 -4.7416 | overlap 1561366 CGAACCCCTTCTGTA TTTTTC AAA GAAAAG TTTTTAAGGTTTTCA MADE_01456 1562751 - 1562167 - | hypothetical protein MADE_01457 1563113 - 1562748 - | response regulator TERM 1579 1563351 - 1563323 - R 75 -9.5 -3.34344 | opp_overlap 1563319, overlap 1563324 GTAGGGGGGAAGTAA GGGTGTGAACCGA CAC CCGGTACACACCA CAACATTTTAGGTAT TERM 1580 1563350 - 1563324 - R 90 -13 -2.60392 | opp_overlap 1563319, overlap 1563323 TAGGGGGGAAGTAAG GGTGTGAACCGA CAC CCGGTACACACC ACAACATTTTAGGTA MADE_01458 1564534 - 1563359 - | putative aminotransferase MADE_01459 1565379 - 1564558 - | membrane protein TERM 1581 1565273 - 1565259 - G 85 -7.1 -4.95854 | overlap 1565261 TAAAAAAGGGAAAAA CGGCA AGCAA TGCCG GCACAACCACAAACC TERM 1582 1565542 - 1565513 - R 100 -20.9 -4.44548 | opp_overlap 1565521 TACAGTTAATTAAAA CGCTAACACCGAC AACA GTCGGTGTTAGCG AGAGTGCATTAGAAG MADE_01460 1568145 - 1565551 - | TonB-dependent receptor, putative TERM 1583 1565943 - 1565957 + g 88 -8.6 -4.84492 | GGTATTCACTAGGGT CAGAGT CAA ACTCTG TTTTGTTGTAGTTCA TERM 1584 1568237 - 1568251 + H 71 -6.4 -4.15654 | overlap 1568227 CACGAGCACCACATT GATGCG TAT TGCATC TTGTTATTGTTGTTG TERM 1585 1568319 - 1568298 - H 71 -5.1 -4.62069 | overlap 1568299 GGTCTAGGCTAAAAA CTCTTTCGC GCTC GCGGAAGAA AGAAGAATATTCAGG TERM 1586 1569524 - 1569534 + G 71 -6.8 -4.16016 | GCACGCTAGAATTTG CGTC ATC GACG TTTATTGCCCAATCG MADE_01461 1568575 - 1569555 + | transcriptional regulator, LysR family protein MADE_01462 1570304 - 1569603 - | Endonuclease/exonuclease/phosphatase TERM 1587 1569912 - 1569929 + g 91 -6.3 -5.54894 | gap 1, opp_overlap 1569912 1569907, overlap 1569903 ATGAAGCAAAGAGAA CTGTGAGC GCC GCTC-CAG TTTTTTTAGTCCCTT TERM 1588 1570109 - 1570089 - G 73 -11.2 -2.62263 | overlap 1570075 AGCGTTGCCATACCA GCCATCAG CTTCT CTGATGGC TGGCGAAGGTATAAG MADE_01463 1572520 - 1570304 - | Phospholipase D/Transphosphatidylase TERM 1589 1570693 - 1570704 + g 73 -4.4 -4.82901 | overlap 1570686 1570685 CGACCGCCGCGACCT TAGG GCCG CCTA TTTTTCTAAGCCCAG TERM 1590 1572087 - 1572102 + g 75 -3.2 -5.1861 | opp_overlap 1572084 1572087 GAAAACACCAATTCA TCGTCG ATAA CCACGA TTTTTTGATGCTGGC TERM 1591 1572933 - 1572901 - R 100 -15.8 -4.06687 | opp_overlap 1572907, overlap 1572903 1572907 ATGGCTGACAAACAA CACAAAGCCTTTGC ACAGG GCAAAGGCTTTGTA ACTATTTAACTAAGT TERM 1592 1572931 - 1572903 - R 100 -16.2 -3.62695 | opp_overlap 1572907, overlap 1572901 1572907 GGCTGACAAACAACA CAAAGCCTTTGC ACAGG GCAAAGGCTTTG TAACTATTTAACTAA TERM 1593 1572907 - 1572927 + r 90 -11.2 -3.99957 | opp_overlap 1572903 1572901 1572907 GACAAACAACACAAA GCCTTTGC ACAGG GCAAAGGC TTTGTAACTATTTAA TERM 1594 1572927 - 1572907 - R 93 -11.2 -4.42743 | opp_overlap 1572907, overlap 1572903 1572901 GACAAACAACACAAA GCCTTTGC ACAGG GCAAAGGC TTTGTAACTATTTAA MADE_01464 1573568 - 1572972 - | putative outer membrane protein A TERM 1595 1573796 - 1573776 - H 71 -6.1 -4.21812 | overlap 1573778 1573779 TGCTATTGAAAACAA GACGGGAAA AAT TTTCCCAGC CTCTGAAAGAGATTC TERM 1596 1573842 - 1573855 + H 90 -5.3 -5.68039 | CTAATATGTACGCTT CGTTA GTCG TAACG TTTTTTTATCCGTTT TERM 1597 1573878 - 1573897 + H 76 -7.2 -4.24338 | opp_overlap 1573878 ATCCGTTTAAATAAA TCTGATAG TTAA CTGTCAGA TTTTAAAGTCTTTTT TERM 1598 1573916 - 1573936 + H 72 -9.1 -3.29386 | overlap 1573910 TAAAGTCTTTTTACA TTGATTGGA TTT TCCAATCAG TTGAATTCATTTTAT TERM 1599 1574226 - 1574209 - g 81 -8.5 -4.4648 | overlap 1574225 ACGGGCATGACAAAA GCTTTTC AACC GAAAAGC AACCAATTTTGGTGG MADE_01465 1574035 - 1576380 + | Catalase TERM 1600 1576420 - 1576445 + F 91 -8.2 -5.252 | opp_overlap 1576420 1576419 GATAGCTAACAAAAG GGGGCACTTC ACTTTA GGAGGGCCCC TTTTTTATGCAAATG MADE_01466 1576692 - 1577177 + | hypothetical protein MADE_01467 1578530 - 1577205 - | mechanosensitive ion channel family protein TERM 1601 1578132 - 1578154 + g 74 -3.4 -5.07652 | opp_overlap 1578131 AATCGGTAAACCTAC CCATCGCA TAAGCCC TGCAATGG TTTTATTTTCAACAA TERM 1602 1579120 - 1579145 + r 100 -14.9 -5.09259 | opp_overlap 1579120 ACCCTACAAAGCAAA CAGGCTTCTTA GAAA TAAGAAGCCTG TTTTATTTTACAATC TERM 1603 1579145 - 1579120 - R 100 -14.9 -4.14397 | opp_overlap 1579120 ACCCTACAAAGCAAA CAGGCTTCTTA GAAA TAAGAAGCCTG TTTTATTTTACAATC MADE_01468 1579908 - 1579177 - | putative regulatory protein, GntR family TERM 1604 1579668 - 1579687 + g 91 -6.4 -5.52986 | CAAATGCACTGATAG GCTTGGTT ACCT GACCAGGC TTTTTTTGATGCAGT TERM 1605 1582669 - 1582679 + G 79 -3.2 -5.28826 | overlap 1582665 GTCGCTTACCGCCAT GGAT ATG GTCC TTTTTTCTGGAATTT MADE_01471 1582301 - 1582762 + | putative ketodeoxygluconokinase MADE_01472 1583519 - 1582998 - | ISSod6, transposase MADE_01473 1583973 - 1584365 + | predicted membrane protein i A1501 MADE_01474 1584844 - 1584374 - | membrane protein-like protein MADE_01475 1584877 - 1585581 + | chain II protein of putative cytochrome c oxidase TERM 1606 1585784 - 1585797 + G 80 -6.7 -4.8048 | overlap 1585759 ACTCATTACTGCCGA CCTGT ATTC ACAGG TTTTTACTATGCACG TERM 1607 1586264 - 1586278 + G 82 -2.8 -5.55664 | GTTAGAGCTTGAGCG GGCA GCGCAAA TGCC TTTTTTTGATCCTAA TERM 1608 1588039 - 1588049 + G 78 -5.4 -4.87626 | TTATTTTTTGGCTAA GCTT CGC AAGC TTTTTGATCTTACCA MADE_01476 1585578 - 1588085 + | putative cytochrome c oxidase subunit I MADE_01477 1588172 - 1588423 + | hypothetical protein MADE_01478 1588414 - 1589217 + | membrane protein-like protein TERM 1609 1589297 - 1589282 - T 75 -8.2 -4.03413 | opp_overlap 1589282 ATCTTGTCATAGAAA GCGCGC CATT ACGCGC TTTCTCGTCACCAAA TERM 1610 1589282 - 1589297 + T 71 -7.5 -3.96148 | opp_overlap 1589282 ATCTTGTCATAGAAA GCGCG CCATTA CGCGC TTTCTCGTCACCAAA MADE_01479 1591006 - 1589327 - | dioxygenase, ferredoxin reductase component, putative TERM 1611 1589965 - 1589983 + g 84 -8.2 -4.57569 | CACGGAAATACTGCC CGATTTGG GTT CCAAATTG TTTTTCAAACGGTAC TERM 1612 1592973 - 1592986 + G 74 -3.8 -5.00616 | TAGGACATATAGACG CGGT ATGGGA ACCG TTTTTTGCAGGCGGG MADE_01480 1591340 - 1593814 + | DNA polymerase 3, epsilon subunit TERM 1613 1594143 - 1594131 - f 84 -10.5 -3.94188 | opp_overlap 1594131 AGGCATGGGAAATAA GCGCC ATT GGCGC TTTTTTTGTCTAAAC TERM 1614 1594131 - 1594143 + F 100 -10.5 -5.71712 | opp_overlap 1594131 AGGCATGGGAAATAA GCGCC ATT GGCGC TTTTTTTGTCTAAAC MADE_01481 1594238 - 1594495 + | suppressor of inhibitory function of ChpB MADE_01482 1594495 - 1594833 + | transcriptional modulator of MazE/toxin, MazF MADE_01483 1594847 - 1595143 + | hypothetical protein MADE_01484 1595134 - 1595319 + | hypothetical protein TERM 1615 1595450 - 1595437 - g 89 -6.7 -5.4182 | opp_overlap 1595437 1595436, overlap 1595449 AATGATAAAGAAAAA GCGTT GGTA AACGC GTTTTACACTGGTGC MADE_01485 1595344 - 1595580 + | hypothetical protein MADE_01486 1595878 - 1596258 + | hypothetical protein MADE_01487 1597381 - 1596314 - | hypothetical protein TERM 1616 1596859 - 1596879 + g 72 -5.4 -4.37734 | overlap 1596860 CATTAAACTCTATTA CCCCAGAA TTGTT TTCTGGGC TTTTGAGTTGTTCTG TERM 1617 1597760 - 1597735 - H 76 -7.6 -4.21922 | opp_overlap 1597738 1597740 1597742 1597744, overlap 1597730 1597736 TTATGCAAAACGAAA CCCTGTTTGG GACACA CCAAACAGGT GAGTCCTATATGTTT TERM 1618 1597759 - 1597736 - H 79 -11.1 -3.1243 | opp_overlap 1597738 1597740 1597742 1597744, overlap 1597730 1597735 TATGCAAAACGAAAC CCTGTTTGG GACACA CCAAACAGG TGAGTCCTATATGTT TERM 1619 1597738 - 1597772 + H 79 -3.5 -5.4505 | opp_overlap 1597730 1597736 1597735, overlap 1597740 1597742 1597744 TGCAAAACGAAACCC TGTTTGGGACACACC AAACA GGTGAGTCCTATATG TTTTTTCTTACACAA TERM 1620 1597740 - 1597770 + H 74 -6.1 -4.36592 | opp_overlap 1597730 1597736 1597735, overlap 1597738 1597742 1597744 CAAAACGAAACCCTG TTTGGGACACACC AAACA GGTGAGTCCTATA TGTTTTTTCTTACAC TERM 1621 1597742 - 1597768 + H 73 -8.7 -3.77157 | opp_overlap 1597730 1597736 1597735, overlap 1597740 1597738 1597744 AAACGAAACCCTGTT TGGGACACACC AAACA GGTGAGTCCTA TATGTTTTTTCTTAC TERM 1622 1597744 - 1597766 + H 72 -9.1 -3.4376 | opp_overlap 1597736 1597735, overlap 1597742 1597740 1597738 ACGAAACCCTGTTTG GGACACACC AAACA GGTGAGTCC TATATGTTTTTTCTT MADE_01488 1597822 - 1598157 + | hypothetical protein TERM 1623 1598205 - 1598175 - f 70 -7.7 -3.71607 | gap 1, opp_overlap 1598183 GCAAGATTATTTAAA CCCATCAGGGACAA AACA TTGTCCTT-ATGGG CTAGAGGTTGTTGAT MADE_01489 1598307 - 1598828 + | ISSod6, transposase MADE_01490 1599060 - 1599578 + | putative ketodeoxygluconokinase TERM 1624 1599826 - 1599814 - gf 83 -10.5 -3.73953 | ATTAGCGCTATTAAA GCGGC GTT GCCGC ACATGATTGTTAGTG MADE_01491 1599643 - 1600254 + | putative 4-hydroxy-2-oxoglutarate aldolase TERM 1625 1600318 - 1600280 - gf 85 -7 -4.94168 | gap 3, opp_overlap 1600290, overlap 1600284 1600290 ACAGAATAAAATAAA GCACGAAAAAGAGCCGGCA TCGT TGCCGGCTCTTTT--GT-C TAAAGTCTCTATTGT TERM 1626 1600318 - 1600284 - gf 100 -16.7 -2.57146 | gap 1, opp_overlap 1600290, overlap 1600280 1600290 AATAAAATAAAGCAC GA-AAAAGAGCCGGCA TCGT TGCCGGCTCTTTTGTC TAAAGTCTCTATTGT TERM 1627 1600290 - 1600311 + GF 100 -15.9 -4.54449 | opp_overlap 1600280 1600284 1600290 ATAAAGCACGAAAAA GAGCCGGCA TCGT TGCCGGCTC TTTTGTCTAAAGTCT TERM 1628 1600311 - 1600290 - gf 100 -15.9 -4.85267 | opp_overlap 1600290, overlap 1600280 1600284 ATAAAGCACGAAAAA GAGCCGGCA TCGT TGCCGGCTC TTTTGTCTAAAGTCT MADE_01492 1600218 - 1600427 + | hypothetical protein MADE_01493 1600462 - 1601628 + | hypothetical protein MADE_01494 1601628 - 1602047 + | hypothetical protein TERM 1629 1602086 - 1602067 - T 70 -9.3 -3.26449 | opp_overlap 1602064 CCTCATACAACGGAA GCGCCTT GCTTAT AAGGCGC GCCTTCGTGAGGTAG MADE_01495 1603446 - 1602076 - | sensory box/GGDEF family protein TERM 1630 1602237 - 1602251 + g 76 -4.3 -4.92783 | AGTTTAAGCTTTTTG CCATT TTTAT AATGG TTTTTGTGATGAGTT MADE_01496 1604294 - 1603443 - | hypothetical protein TERM 1631 1603502 - 1603512 + g 73 -4 -4.91109 | CCGTTTCTTCTACTT TTAC ATC GTAA TTTTTATCATCAACC MADE_01497 1604702 - 1606144 + | ATP-dependent RNA helicase RhlE TERM 1632 1606314 - 1606326 + T 70 -2.7 -5.02439 | GCGTTATTTCAGTTC GTTTT ACT AAGAC TTTTTGTAGTTCTGT MADE_01498 1606924 - 1606307 - | thiol-disulfide isomerase MADE_01499 1608472 - 1607024 - | 2-keto-4-pentenoate hydratase, putative MADE_01500 1609167 - 1608511 - | response regulator (activator) in two-component regulatory system wtih UhpB, regulates uhpT expression (LuxR/UhpA family) protein TERM 1633 1609279 - 1609302 + r 76 -10.9 -2.52015 | opp_overlap 1609280, overlap 1609278 GTAAGCGCACAAAAA AGCCGGCCC TTCCAT GGGCCGGCA GTTGCTCAATATGGG TERM 1634 1609301 - 1609280 - R 100 -14.4 -5.27923 | opp_overlap 1609279 1609278 TAAGCGCACAAAAAA GCCGGCCC TTCCAT GGGCCGGC AGTTGCTCAATATGG TERM 1635 1609388 - 1609366 - R 71 -7 -4.09243 | CATATCTCGCTAAAA CAGAAAACCT TAA AGGTTTACCG TCACTGGCGCAGAGC MADE_01501 1611897 - 1609375 - | putative secreted serine protease, subtilisin family, possibly excreted TERM 1636 1610804 - 1610784 - G 79 -7.5 -4.386 | opp_overlap 1610784 GAATTGTTGATAAAA TTGCCGAAC CCG GCGCGGCAA TATCTACGGTTTCAA TERM 1637 1612276 - 1612288 + H 70 -5.5 -4.3739 | AGTGATGGATTCTCG CGCTT TTA AGGCG TTTTATAGAAGGGTC MADE_01502 1612338 - 1612850 + | minor curlin subunit CsgB, putative MADE_01503 1612875 - 1614326 + | putative secreted major subunit of curlin, may bind calcium TERM 1638 1614334 - 1614356 + F 86 -9.9 -4.12188 | gap 1, opp_overlap 1614327, overlap 1614335 1614336 AAATGTAAGCGCGAG TA-GCCGGGC ACAA GCCCGGCCTA TTTTCAAAATAATGA TERM 1639 1614335 - 1614354 + F 83 -10.6 -3.6581 | opp_overlap 1614327, overlap 1614334 1614336 AATGTAAGCGCGAGT AGCCGGGC ACAA GCCCGGCC TATTTTCAAAATAAT TERM 1640 1614336 - 1614353 + F 93 -14.1 -2.79004 | opp_overlap 1614327, overlap 1614335 1614334 ATGTAAGCGCGAGTA GCCGGGC ACAA GCCCGGC CTATTTTCAAAATAA MADE_01504 1614368 - 1614760 + | curli production assembly/transport component TERM 1641 1614930 - 1614918 - g 72 -9.1 -3.55368 | opp_overlap 1614926 AGCTAATTCACAGAA TGCGC ATA GCGCA CCGCTAAGTGAGCGC MADE_01505 1614754 - 1615209 + | putative curli production assembly/transport component TERM 1642 1615808 - 1615794 - g 72 -2.8 -5.03314 | overlap 1615795 TCTACCTCTAAAAAA GTCTTG AGC CAAGAA GTAAGAGCTGGGCTC TERM 1643 1615930 - 1615920 - g 70 -2.4 -5.06585 | opp_overlap 1615920 CAAAGTATAGAAAAA GCGG TGA CCGA ATTGGTACTGCAGGG MADE_01506 1615218 - 1615979 + | putative transport protein for curli synthesis MADE_01507 1616485 - 1616006 - | putative transcriptional regulator, LuxR family protein MADE_01508 1616970 - 1616851 - | hypothetical protein MADE_01509 1617073 - 1616957 - | hypothetical protein TERM 1644 1617208 - 1617177 - g 77 -8.8 -3.84648 | gap 1, overlap 1617173 1617178 CAAGCGAAAAAGCAA CCGTACACCAAAGGG TTT CGCTTTGGTGCA-GG CGAGGCGCTTGCGGT TERM 1645 1617490 - 1617466 - g 71 -7 -4.1822 | overlap 1617467 TTGGATTGGAAGAAA CGCTAGCGCC TTACG GGCGCGAGCC TCACTCGGTGATTGG TERM 1646 1617489 - 1617467 - g 73 -10.5 -3.10611 | overlap 1617466 TGGATTGGAAGAAAC GCTAGCGCC TTACG GGCGCGAGC CTCACTCGGTGATTG TERM 1647 1617729 - 1617717 - g 73 -7.7 -4.09551 | AAACGTTACAAAGAA GCTGA CGT TCAGC ACCCTGACGCTCGTG MADE_01510 1617084 - 1618817 + | D-lactate dehydrogenase TERM 1648 1618845 - 1618881 + F 83 -12.4 -2.83249 | opp_overlap 1618845, overlap 1618842 1618842 CGTTAAATACGACAA GGCTGCTGATTTTTGT GTTAA ACAAAGGTCAGCCGCC TCATGTTCTATCAAC MADE_01511 1619005 - 1621035 + | putative high-affinity choline transport protein TERM 1649 1621087 - 1621066 - T 100 -13.1 -4.65263 | opp_overlap 1621066 ACCTTGTAAAATAAA GGGAAAGCA AACT TGCTTTCCC TTATTATCCCCTAGT TERM 1650 1621066 - 1621087 + T 100 -13.1 -3.81 | opp_overlap 1621066 ACCTTGTAAAATAAA GGGAAAGCA AACT TGCTTTCCC TTATTATCCCCTAGT TERM 1651 1621109 - 1621124 + T 72 -3.2 -5.11937 | TCCCCTAGTACCTGG GTGTTG ACCT CAGCGC TTTTTTCCCGTTATT MADE_01512 1622049 - 1621174 - | 3-hydroxyisobutyrate dehydrogenase TERM 1652 1621591 - 1621617 + g 77 -9.3 -3.86015 | overlap 1621592 GTGAACAATCTTTTT ACCCATGGCGC CAAGT GCGCCTTGGGC TTTATCGAACGCGTC TERM 1653 1621592 - 1621616 + g 79 -12.8 -2.91395 | overlap 1621591 TGAACAATCTTTTTA CCCATGGCGC CAAGT GCGCCTTGGG CTTTATCGAACGCGT TERM 1654 1621685 - 1621659 - G 70 -8.8 -3.34455 | gap 1, overlap 1621654 CCACCATAAAGGTAA GTGT-GCCGCT CGCAGC AGCGGCAACAC CACCTGATACAGGGG TERM 1655 1621699 - 1621719 + g 77 -3.9 -5.24129 | opp_overlap 1621685 ACCACCTGATACAGG GGCATCAAG CAT CTTAAGGCC TTTTTTCTCAGCGAG MADE_01513 1623563 - 1622064 - | methylmalonate-semialdehyde dehydrogenase, putative TERM 1656 1623495 - 1623507 + g 76 -7.7 -4.23054 | overlap 1623473 1623502 GGTATTAGGCGCGAA TACCG ATG CGGTA TTTTCACTGCTATCT TERM 1657 1624393 - 1624377 - g 73 -10.9 -2.64155 | opp_overlap 1624376 1624375 TTTTGCCTAAATTTA TGGCTGA AAC TCAGCCA GGTTTAGTTAGGCTA MADE_01514 1623677 - 1624546 + | transcriptional regulatory protein TERM 1658 1624582 - 1624619 + F 72 -9.4 -3.03771 | gap 2, opp_overlap 1624582 GTTCCACTATTTAAA GGGGC-A-TTTATCCTAC CTTG GTAGGATGAATTCGCCCC TATTGCAGGATGTGC MADE_01515 1624607 - 1625950 + | sensor histidine kinase MADE_01516 1625947 - 1626246 + | DNA-binding response regulator, LuxR family protein TERM 1659 1626269 - 1626236 - f 72 -9.7 -2.94804 | gap 1, overlap 1626235 AACTAAATCAAGAAG CGACGATCTGATCGGC TAC ACCCATCA-ATCGTCG TAGCCTCATGCCTAA MADE_01517 1626277 - 1627197 + | transposase TERM 1660 1627422 - 1627409 - f 73 -2.3 -5.2291 | opp_overlap 1627421 ATACGACAAGAAAAA TGCGC AGTG GCCCA CATCTTGTGATTAAT TERM 1661 1628005 - 1627983 - f 70 -8.4 -3.36655 | overlap 1627981 1627979 1627985 CGATAACCAAATACA CAGCGCGC GGGCCGA GCGCGCTA GAATGCCTTCCGTTT TERM 1662 1628001 - 1627985 - f 70 -9.3 -3.24058 | overlap 1627983 1627981 1627979 ATAACCAAATACACA GCGCGCG GGC CGAGCGC GCTAGAATGCCTTCC MADE_01521 1629358 - 1630476 + | S-adenosyl-L-homocysteine hydrolase TERM 1663 1630529 - 1630556 + F 85 -8.4 -4.47118 | opp_overlap 1630529, overlap 1630526 AAGAACTAAACGAAT TGTCGGGGGAGC GACT GCTATCTCGACA TTATTTTTGAGTGTT MADE_01522 1630617 - 1631822 + | putative metal-dependent dipeptidase TERM 1664 1631862 - 1631838 - T 89 -10.1 -4.17878 | opp_overlap 1631838, overlap 1631861 GTAAACTAAATTAAA GCTGCTCTT TATTACG AAGAGCAGC TGTAGTGTGCAACAC TERM 1665 1631838 - 1631862 + T 77 -10.8 -2.85351 | opp_overlap 1631838 1631861 GTAAACTAAATTAAA GCTGCTCTTT ATTAC GAAGAGCAGC TGTAGTGTGCAACAC MADE_01523 1633552 - 1631849 - | hypothetical protein TERM 1666 1635136 - 1635117 - g 72 -2.9 -5.03314 | gap 1 CGCATTTCGAAAAAA CACCGAAG ATATA CTT-GGTG CATGGTGAAGAGGGC TERM 1667 1635176 - 1635148 - g 73 -10.3 -3.04144 | GGTGCATGGTGAAGA GGGCGCTAAACAA ACC TTGTGTAGCGCCA TTAAAGAAAAGGGAT MADE_01524 1633868 - 1635235 + | Beta-lactamase-like:RNA-metabolising metallo-beta-lactamase MADE_01525 1635821 - 1635264 - | lipoprotein TERM 1668 1638397 - 1638385 - g 71 -3.3 -4.78149 | opp_overlap 1638396, overlap 1638377 1638386 GCCACAAGCGAAAAA TCCAC CCC GTGGC GCGACTTTCCGCTAT MADE_01526 1636100 - 1638895 + | glycosyl hydrolase, BNR repeat-containing protein MADE_01527 1638879 - 1639226 + | hypothetical protein TERM 1669 1639307 - 1639265 - T 80 -7.8 -4.4715 | opp_overlap 1639267 1639272, overlap 1639267 1639272 GCTGAAGCTATAAAA CCGAAAAGCCGGAAGTGT GATTAAG ACACTTCCGGCTTTTATT TACGGTTTTAAACCT TERM 1670 1639305 - 1639267 - T 95 -14.8 -2.56203 | opp_overlap 1639267 1639272, overlap 1639265 1639272 TGAAGCTATAAAACC GAAAAGCCGGAAGTGT GATTAAG ACACTTCCGGCTTTTA TTTACGGTTTTAAAC TERM 1671 1639267 - 1639305 + T 100 -14.8 -3.76413 | opp_overlap 1639267 1639265 1639272, overlap 1639272 TGAAGCTATAAAACC GAAAAGCCGGAAGTGT GATTAAG ACACTTCCGGCTTTTA TTTACGGTTTTAAAC TERM 1672 1639300 - 1639272 - T 100 -14.7 -4.4595 | opp_overlap 1639267 1639272, overlap 1639267 1639265 CTATAAAACCGAAAA GCCGGAAGTGT GATTAAG ACACTTCCGGC TTTTATTTACGGTTT TERM 1673 1639272 - 1639300 + T 100 -14.7 -4.91429 | opp_overlap 1639272 1639267 1639265, overlap 1639267 CTATAAAACCGAAAA GCCGGAAGTGT GATTAAG ACACTTCCGGC TTTTATTTACGGTTT MADE_01528 1641540 - 1639378 - | TonB-dependent receptor MADE_01529 1641827 - 1643701 + | putative orphan protein MADE_01530 1643775 - 1644257 + | hypothetical protein MADE_01531 1645139 - 1644276 - | putative MadN protein TERM 1674 1645116 - 1645104 - G 74 -5.5 -4.68645 | GAGCGAAAAGGAAAA TGCCC ACA GGACA GTAACTGTTATTAAA MADE_01532 1646080 - 1645211 - | glycerol uptake facilitator protein GlpF TERM 1675 1645691 - 1645675 - G 82 -3 -5.4588 | gap 1, overlap 1645676 1645677 GAAAAGTAGAAAAAA TGCTGGC GGTC GCCAG-A GCCTCTACACTATCG MADE_01533 1646571 - 1646440 - | hypothetical protein MADE_01534 1646806 - 1648749 + | Outer membrane receptor for ferrienterochelin and colicins TERM 1676 1648874 - 1648853 - f 87 -3.6 -5.76949 | overlap 1648854 1648867 1648869 CACTTTCAAAAAAAA CGGCCCCA AAAAAA TCGGGCCA AAAAAACGGCCCAAA TERM 1677 1648888 - 1648867 - f 89 -5.8 -5.40474 | overlap 1648854 1648853 1648869 ACGGCCCCAAAAAAA TCGGGCCA AAAAAA CGGCCCAA AAACTTAGGTTAAAA TERM 1678 1648970 - 1648950 - f 72 -3.2 -5.13527 | overlap 1648945 1648951 1648952 AACCAATAAATAAAA CCCGCTGC TTAAC ACAGCGAA TTTAAAATAAGGAAA MADE_01535 1648990 - 1650132 + | hypothetical protein TERM 1679 1650219 - 1650235 + G 82 -11.5 -3.53444 | overlap 1650213 AGTTTGTTTGCACTA GGGGCGT TTA GCGCCCC TTTGGAAGAGACTCA TERM 1680 1650652 - 1650642 - g 79 -4.6 -5.16841 | overlap 1650643 GTAGAGCAACAAAAA GCGC GGT ACGC CGATAAAACCTCTGC MADE_01536 1650135 - 1651091 + | ABC-type hemin transport system, periplasmic component MADE_01537 1651091 - 1652227 + | ABC-type hemin transport system, pemease component TERM 1681 1652762 - 1652776 + G 72 -5.7 -4.43681 | opp_overlap 1652762 1652757, overlap 1652771 GTGATCAGAACGAGA GCTTG GAAGG CAAGC TTTTGCTGTTAGATG MADE_01538 1652233 - 1653063 + | ABC-type hemin transport system, ATPase component TERM 1682 1653725 - 1653713 - g 83 -6.3 -4.96848 | opp_overlap 1653713 TGCGGTACAGAAAAA CAAAC GTG GTTTG TCCCTTTTGAGGCGC MADE_01539 1653101 - 1653832 + | uncharacterized metal-binding protein MADE_01540 1654103 - 1653807 - | hypothetical protein TERM 1683 1654100 - 1654114 + g 76 -4.3 -4.91473 | ACAGTATGCTTCCCC CCATA CTCCA TATGG TTTATTTTTGGCTTA MADE_01541 1654111 - 1654404 + | Stress responsive alpha-beta barrel MADE_01542 1654478 - 1655188 + | hypothetical protein MADE_01543 1655282 - 1655701 + | probable RTX (repeat in structural toxin) MADE_01544 1655807 - 1656313 + | hypothetical protein TERM 1684 1656323 - 1656341 + F 72 -8.8 -3.57572 | opp_overlap 1656314 AGATAATTGGACTCC CCCAACTC ATT GAGCTGGG TTAATATTTTAGTTC TERM 1685 1656680 - 1656653 - g 76 -4 -4.98758 | AAAAACTGATAAAAA CGATGCTTTAGC GGTT GCACAAGCAGCG CAACTCACCGATGTT MADE_01545 1656384 - 1657421 + | ISCps1, transposase MADE_01546 1657605 - 1659548 + | hypothetical protein TERM 1686 1659593 - 1659575 - f 81 -11.7 -2.66695 | opp_overlap 1659572 1659567 1659575, overlap 1659574 1659572 CTTCCTATGAAATAT GCAGCCC CTAGC GGGCTGC TGTTGTCGTTATTAG TERM 1687 1659575 - 1659593 + F 86 -11.7 -3.37831 | opp_overlap 1659575 1659574 1659572, overlap 1659572 1659567 CTTCCTATGAAATAT GCAGCCC CTAGC GGGCTGC TGTTGTCGTTATTAG TERM 1688 1662409 - 1662377 - g 84 -7.5 -4.89393 | opp_overlap 1662397, overlap 1662379 1662395 1662396 GAAAGCCGATAAAAA GTTGGCCAACAGCAG AAA CCGCGGACGGCCAGC CCGCTATTGCCCTAG TERM 1689 1662497 - 1662520 + G 83 -14 -2.62292 | opp_overlap 1662495 1662492, overlap 1662489 1662494 GGTTATTCAACGACC CGCTGTTATC TCGT GATAACAGCG TAAGTTGTGCTAGTT MADE_01549 1662355 - 1663347 + | cytochrome-c peroxidase TERM 1690 1665043 - 1665065 + G 85 -12.8 -3.35679 | opp_overlap 1665045 1665048, overlap 1665048 TAACCATATCTAGCA CACAATGGGG CTA TCCCATTGTG TTGTCGCTACACGCC MADE_01550 1663599 - 1665413 + | hypothetical protein MADE_01551 1666237 - 1665410 - | integrase TERM 1691 1666300 - 1666318 + r 76 -4.5 -5.08169 | overlap 1666290 TTACTTGGTTTCTTT GGCAAAG AAGAC CGTTGCC TTTTTTAAGATCTCT MADE_01552 1666578 - 1666285 - | transposase, IS911 MADE_01553 1666723 - 1667220 + | hypothetical protein MADE_01554 1667486 - 1669357 + | 1,4-alpha-glucan branching enzyme TERM 1692 1669462 - 1669431 - T 88 -8.1 -5.09762 | opp_overlap 1669431 ATGGCAATATAAAAA GGCCTAACGGA GTATAAAATG TCCATTAGGCC TTTATTGTTGATAAG TERM 1693 1669431 - 1669462 + T 81 -7.4 -4.48713 | gap 1, opp_overlap 1669431 ATGGCAATATAAAAA GGCCTAACGGAGTAT AAA ATG-TCCATTAGGCC TTTATTGTTGATAAG MADE_01555 1670425 - 1669535 - | transport protein MADE_01556 1670697 - 1670452 - | hypothetical protein TERM 1694 1671108 - 1671094 - g 72 -5.6 -4.47456 | opp_overlap 1671093 ACACCTAAGAAGAAA CTAGGC GTA GCCTTG CTTGGCTTAGGCAAT MADE_01557 1670995 - 1672083 + | glucose-fructose oxidoreductase MADE_01558 1672205 - 1672065 - | hypothetical protein MADE_01559 1673271 - 1672198 - | hypothetical protein MADE_01560 1674150 - 1673362 - | lipase-related protein MADE_01561 1674703 - 1674347 - | translation initiation inhibitor MADE_01562 1674974 - 1675150 + | Prevent-host-death protein MADE_01563 1675164 - 1675484 + | hypothetical protein TERM 1695 1675658 - 1675673 + F 73 -7.6 -4.02719 | opp_overlap 1675658 TCAGATACAAAAAAA CCAACT GAAA AGTTGG TTTAATGTTTGGTAC TERM 1696 1675673 - 1675658 - f 100 -7.6 -5.76633 | opp_overlap 1675658 TCAGATACAAAAAAA CCAACT GAAA AGTTGG TTTAATGTTTGGTAC TERM 1697 1675814 - 1675794 - f 72 -3.3 -5.16969 | overlap 1675795 CAGACAAAAAAGAAA CTTTGCAAA TTC TTTGCATAA CTACTTTGATTCTCA MADE_01564 1675944 - 1676204 + | predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain MADE_01565 1676191 - 1676484 + | Plasmid stabilization system A TERM 1698 1676586 - 1676600 + T 84 -7.8 -4.66814 | opp_overlap 1676586 ACAGGCACAAAAAAA CCGACT CAA GGTCGG TTTATTGTTTCTCTT TERM 1699 1676600 - 1676586 - T 100 -7.1 -5.65177 | opp_overlap 1676586 ACAGGCACAAAAAAA CCGAC TCAAG GTCGG TTTATTGTTTCTCTT TERM 1700 1676675 - 1676697 + T 72 -9 -3.33399 | overlap 1676671 TGGACCGACACTCGG ACGGCGCGCT TTA GGCGTGCCGA TTCAATTTCGTTCAG TERM 1701 1676724 - 1676738 + T 84 -7.8 -4.66814 | opp_overlap 1676724 TCAGGCACAAAAAAA CCGACT CAA GGTCGG TTTATTGTTTCTCTT TERM 1702 1676738 - 1676724 - T 100 -7.1 -5.64274 | opp_overlap 1676724 TCAGGCACAAAAAAA CCGAC TCAAG GTCGG TTTATTGTTTCTCTT MADE_01566 1678110 - 1677013 - | hypothetical protein MADE_01567 1679203 - 1678139 - | putative orphan protein; putative signal peptide TERM 1703 1678981 - 1678971 - G 76 -8.2 -4.11394 | opp_overlap 1678971 AGCCTATTTGTAAAA CGCG TCA CGCG TTCTCTTTCATCTCC TERM 1704 1678971 - 1678981 + g 74 -8.2 -3.88438 | opp_overlap 1678971 AGCCTATTTGTAAAA CGCG TCA CGCG TTCTCTTTCATCTCC MADE_01568 1679773 - 1679300 - | putative unknown lipoprotein MADE_01569 1681470 - 1679878 - | hypothetical protein TERM 1705 1681179 - 1681165 - G 70 -2.1 -4.92828 | AAAGTTAAAAACAAA GCTGA TATCT TCAAC CGCATCACCGTCGCT TERM 1706 1681603 - 1681588 - R 90 -10.4 -4.45765 | opp_overlap 1681588 GTTAAAAGCAAGAAA GGCCAC ATGC GTGGCC TTTATAAGTGTAAGA TERM 1707 1681588 - 1681603 + r 84 -10.4 -3.95073 | opp_overlap 1681588 GTTAAAAGCAAGAAA GGCCAC ATGC GTGGCC TTTATAAGTGTAAGA MADE_01570 1682366 - 1681632 - | hypothetical protein MADE_01571 1682896 - 1682363 - | putative RNA polymerase sigma factor (ECF family) protein TERM 1708 1683041 - 1683012 - R 87 -5 -5.42131 | CAATCACATAAAAAA TAACGGTACTCG AGAGTG CCAGCACCGCTA TGGCTATTGAATACT MADE_01572 1685126 - 1683066 - | TonB-dependent receptor, putative MADE_01573 1685469 - 1685912 + | RDD domain containing protein TERM 1709 1685975 - 1685958 - T 93 -5.5 -5.68039 | opp_overlap 1685958, overlap 1685950 AAAGTTATAAAAAAA GAGGCGT CAAC ATGCCTC TTTTTATAGGACTTG TERM 1710 1685958 - 1685975 + T 86 -7.7 -4.8543 | opp_overlap 1685958 1685950 AAAGTTATAAAAAAA GAGGCGT CAAC ATGCCTC TTTTTATAGGACTTG MADE_01574 1687084 - 1686023 - | predicted permease MADE_01575 1688185 - 1687085 - | permease YjgP/YjgQ TERM 1711 1687467 - 1687520 + g 87 -10.5 -4.13728 | CGGGTTTCATCAGCA GGCTTATCGGCAATTTGAATTTGGT ATTC ATCAAATTCAACTTTGCGGTAGGCC TTTTCAGACTGTATA TERM 1712 1688902 - 1688890 - g 85 -3.3 -5.46698 | CTTAAAACGAAAAAA GGCGA GCC TCGTC GTCCGCTGCGTAAAA MADE_01576 1688413 - 1689954 + | leucyl aminopeptidase MADE_01577 1689961 - 1690383 + | DNA polymerase III chi subunit TERM 1713 1691111 - 1691123 + G 71 -7.7 -3.85698 | TCACCCCGATGACGA GCGTT ATC AACGC TTTATCGGCAAAGAA TERM 1714 1691548 - 1691575 + G 82 -11.4 -3.63694 | opp_overlap 1691545 1691564 AAAGCGGTGAAATTC GTTTTGTGCCAG AGAA CTGGAACAAAAC TTATTACCAGTGGAT TERM 1715 1692536 - 1692524 - g 71 -6.9 -4.11692 | CACCGACGCTGAAAA GCGCG GTA CACGC CATACGCTTATCAAT TERM 1716 1693052 - 1693033 - g 70 -5 -4.42653 | overlap 1693034 AGGCCATGGAGAAAA TCGAGAAA GATG TTTCTCGT ACTCGTGGCAAATTA MADE_01578 1690419 - 1693193 + | valyl-tRNA synthetase TERM 1717 1693213 - 1693251 + T 75 -9.8 -3.40437 | gap 1, opp_overlap 1693222, overlap 1693222 TTACAGTGAAGTAAA CGCGAAAAA-GGTTGCC AACCAA GGCAACCTTTTTTTGTG CTTTGTTATTTTCCT TERM 1718 1693241 - 1693222 - T 89 -9.3 -4.71482 | opp_overlap 1693213 1693222 AGTAAACGCGAAAAA GGTTGCC AACCAA GGCAACC TTTTTTTGTGCTTTG TERM 1719 1693222 - 1693241 + T 100 -9.3 -5.75599 | opp_overlap 1693222, overlap 1693213 AGTAAACGCGAAAAA GGTTGCC AACCAA GGCAACC TTTTTTTGTGCTTTG MADE_01579 1696013 - 1693338 - | Response regulator receiver:ATP-binding region, ATPase-like protein TERM 1720 1694543 - 1694556 + g 70 -2.4 -5.07652 | opp_overlap 1694543 GGTTAACGTTAAAAT GAAC CGATAA GTTC TTTTCTTTTGCGCGC MADE_01580 1697347 - 1696064 - | signal peptide prediction TERM 1721 1696931 - 1696946 + g 83 -6.1 -4.95957 | ATGAGGCGCATCGCC TGCGC CCATGC GCGCA TTTTTGGTTAGTTTC TERM 1722 1697520 - 1697504 - H 73 -8.1 -3.96148 | TTTTTCTATTATAAA GATATCA AAA TGATATC AAAGGTAAGAGCTAT TERM 1723 1697768 - 1697779 + G 76 -4.4 -5.0133 | GATGTGGGTTTACGT TGGA CTAT TCCA TTTTTTCGCAAAGTA MADE_01581 1697534 - 1698382 + | SPFH domain/Band 7 family protein MADE_01582 1698390 - 1698671 + | hypothetical protein MADE_01583 1700209 - 1698776 - | Response regulator containing a CheY-like receiver domain and a GGDEF domain TERM 1724 1700233 - 1700244 + r 74 -4.4 -4.88067 | ACCAATTGAAAGCGT CAGT ATGT ACTG TTTTTATGGGTACAT TERM 1725 1700332 - 1700349 + r 82 -7.7 -4.56775 | opp_overlap 1700332 AAGAAATAGCCATAA GCTGTGT CTTG GCACAGC TTTTTAAAAAAACAT MADE_01584 1701196 - 1700384 - | hypothetical protein MADE_01585 1701708 - 1701310 - | hypothetical protein MADE_01586 1702409 - 1701741 - | 1-acyl-sn-glycerol-3-phosphate acyltransferase TERM 1726 1702091 - 1702107 + g 83 -4.4 -5.4492 | CAATATCCAGCGTAT TTCGGG CTTTA CCTGAA TTTTTTCTGTCTATC TERM 1727 1703201 - 1703184 - g 72 -5.5 -4.41616 | overlap 1703192 ACGTGTTCAAATAAA GCCACCA ACCT TAGCGGC TACGGGTATTCCAAA MADE_01587 1702672 - 1703811 + | HD-GYP domain protein TERM 1728 1703839 - 1703871 + T 77 -10 -3.32022 | opp_overlap 1703839 TCGCTGTGTACGTAA GCGCTAATGCAT AATGATTAA GTGCATTAGCGC TTGGTATATAAACGC MADE_01588 1705296 - 1703902 - | two-component system, response regulator MADE_01589 1706386 - 1705301 - | nitrogen regulation protein NR(II) TERM 1729 1705937 - 1705949 + g 78 -4.8 -5.01811 | opp_overlap 1705937 GGCTGCACCACGAAT TCCG CCTAA CGGA TTTTTAATTTCATGA MADE_01590 1707144 - 1706518 - | hypothetical protein TERM 1730 1706776 - 1706788 + g 85 -5.5 -5.4505 | GTTGCGGATGGTCGC TTCGG GGG CCGGA TTTTTTATTACCACC TERM 1731 1707384 - 1707398 + r 93 -12.8 -3.86283 | opp_overlap 1707384 AGCAGCCATAAAAAA GCCCGC AAA GCGGGC TTTAGTATAAGTTGC TERM 1732 1707398 - 1707384 - R 100 -12.8 -5.28778 | opp_overlap 1707384 AGCAGCCATAAAAAA GCCCGC AAA GCGGGC TTTAGTATAAGTTGC MADE_01591 1708837 - 1707428 - | glutamine synthetase TERM 1733 1708459 - 1708442 - G 70 -2 -5.0925 | gap 1 GTCGAAAAGGAAAAA TTCTGGC TCTGG GCC-GAA GAAACATGTGTCGCC TERM 1734 1708984 - 1709019 + H 86 -9.8 -4.04811 | overlap 1709016 CTTTTGATAGTTTAT GCACCAAAAATGTGCA ATCA TGCTTCTTTTTGGTGC TTTGTACTGGTTTGT MADE_01592 1709296 - 1711128 + | BipA protein TERM 1735 1711178 - 1711161 - f 93 -11.3 -4.16681 | opp_overlap 1711161, overlap 1711150 AATATCATTTTAAAA TGCCAGC TTAT GCTGGCA TTTTTTGTTGAGCTA TERM 1736 1711161 - 1711178 + F 100 -11.3 -5.46657 | opp_overlap 1711161 1711150 AATATCATTTTAAAA TGCCAGC TTAT GCTGGCA TTTTTTGTTGAGCTA MADE_01593 1711366 - 1711743 + | rteB, two-component system response regulator MADE_01594 1711885 - 1713060 + | Aminotransferase, class I and II TERM 1737 1713107 - 1713129 + T 95 -13.5 -3.46602 | opp_overlap 1713107 GAGCGTTGTTAAAAA GGGCCAAAG TATGC CTTTGGCCC TTCTCATATGCAGCG TERM 1738 1713129 - 1713107 - T 100 -13.5 -4.57073 | opp_overlap 1713107 GAGCGTTGTTAAAAA GGGCCAAAG TATGC CTTTGGCCC TTCTCATATGCAGCG TERM 1739 1713198 - 1713232 + T 75 -5.8 -4.68103 | opp_overlap 1713197 1713205, overlap 1713205 CTCACGACGATAACC CAAAAAAGGGGC TAAATTACTCT GCCCCTTTCTTG TTTTCTTGACGTTAG TERM 1740 1713225 - 1713205 - T 83 -5.3 -5.1925 | opp_overlap 1713198 1713205, overlap 1713197 CGATAACCCAAAAAA GGGGCTAAA TTA CTCTGCCCC TTTCTTGTTTTCTTG MADE_01595 1714440 - 1713244 - | putative manganese/divalent cation transport protein (NRAMP family) TERM 1741 1714580 - 1714602 + H 74 -9.3 -3.53012 | opp_overlap 1714600 CGTGCTTTACTTTAT GCCTTATAT GAATG ATATAAGGC TTTAAAAACGCCCCC TERM 1742 1714631 - 1714611 - H 71 -5.3 -4.60255 | overlap 1714600 ATAAGGCTTTAAAAA CGCCCCCTT GCA AAGTGGCCG CGCAGACTACCGTTT TERM 1743 1714999 - 1714987 - g 71 -7.7 -3.90097 | ACGTTAGAAATAGAA GGTAG CGC CTACC CATCCCCCGCACTAG TERM 1744 1715107 - 1715097 - g 72 -3.2 -4.99035 | overlap 1715099 GCACTTAGAGAAAAA CAGC ACT GCTA GTAAAGAAGTGCCTC MADE_01596 1714681 - 1715382 + | yecA family protein MADE_01597 1715610 - 1715422 - | hypothetical protein TERM 1745 1715665 - 1715644 - R 70 -5.8 -4.32651 | AACAATTCATTAAAA CCGAGAAG TGGGGT CTACTCGG CGACTATGTGTACAT MADE_01598 1716221 - 1715793 - | hypothetical protein MADE_01599 1717839 - 1716223 - | putative Voltage-gated ClC-type chloride channel clcA TERM 1746 1718294 - 1718282 - g 81 -3.3 -5.31877 | AGTGAGCAGAAAAAA GAGCT AGA AGCGC AGCAAGAGCTATTAG MADE_01600 1717982 - 1718713 + | hypothetical protein TERM 1747 1718811 - 1718788 - T 90 -11.6 -4.10612 | opp_overlap 1718784 AGTCATAATGATAAA GGCGCACCGG TTTA CTGGCGCGCC AACACGTTTTTACTA MADE_01601 1719276 - 1718827 - | azurin precursor TERM 1748 1719369 - 1719391 + H 83 -6.4 -5.15167 | opp_overlap 1719368 1719369 ACCACTAGATCAAAT CAAATGCTAA TGG TTATCATTTG TTTTTATTGGTGCTA MADE_01602 1719378 - 1719518 + | hypothetical protein TERM 1749 1720799 - 1720768 - g 71 -10.2 -2.71364 | opp_overlap 1720778, overlap 1720778 TGATGCTGCCAATGA TTGCGACCAACTTG CTTT CAAGTTTGTCGCTA ATGACCAACAGTGCA MADE_01603 1719690 - 1721063 + | Fumarase TERM 1750 1721120 - 1721084 - f 95 -13.1 -3.55815 | opp_overlap 1721086 1721093, overlap 1721085 1721093 AAACATGCCCCTAAA CGCGAAAAAGTGCGACC GAG AGTCGCACTTTTTCGTC TTAACGCCGCCGTAA TERM 1751 1721119 - 1721085 - f 100 -16.6 -2.73007 | opp_overlap 1721086 1721093, overlap 1721084 1721093 AACATGCCCCTAAAC GCGAAAAAGTGCGACC GAG AGTCGCACTTTTTCGT CTTAACGCCGCCGTA TERM 1752 1721086 - 1721118 + F 100 -19.4 -3.01791 | opp_overlap 1721085 1721084 1721093, overlap 1721093 ACATGCCCCTAAACG CGAAAAAGTGCGAC CGAGA GTCGCACTTTTTCG TCTTAACGCCGCCGT TERM 1753 1721093 - 1721111 + F 93 -10.3 -4.87626 | opp_overlap 1721085 1721084 1721093, overlap 1721086 CCTAAACGCGAAAAA GTGCGAC CGAGA GTCGCAC TTTTTCGTCTTAACG TERM 1754 1721111 - 1721093 - f 93 -11 -4.70879 | opp_overlap 1721093 1721086, overlap 1721085 1721084 CCTAAACGCGAAAAA GTGCGACC GAG AGTCGCAC TTTTTCGTCTTAACG TERM 1755 1721742 - 1721728 - g 82 -5.6 -5.24129 | TTCGTTCACAAAAAA CAGCGC AAA GTGCTG AGGTTAAAAGCGAAA MADE_01604 1721415 - 1722188 + | septum site-determining protein MinC MADE_01605 1722219 - 1723028 + | septum site-determining protein MinD MADE_01606 1723028 - 1723288 + | cell division topological specificity factor MinE MADE_01607 1724188 - 1723349 - | UDP-galactose-lipid carrier transferase MED92 TERM 1756 1723953 - 1723963 + g 80 -5.4 -5.0916 | AAAACAGAAACACCT CTAG GAT CTAG TTTTTCTGTTAGCCG MADE_01608 1724319 - 1725098 + | hypothetical protein MADE_01609 1725250 - 1725600 + | HesB protein family MADE_01610 1725749 - 1726321 + | putative glutathione S-transferase enzyme with thioredoxin-like domain MADE_01611 1727301 - 1726330 - | D-isomer specific 2-hydroxyacid dehydrogenase family protein TERM 1757 1726727 - 1726738 + g 72 -5.8 -4.41844 | GCTGTGATAGTGTCT GGTG TGTA CACC TTTTCTACCCCTTTT TERM 1758 1727854 - 1727879 + G 70 -4.7 -4.49958 | gap 1 CAAAGTTTATCAAGC GGA-AGTGGCTC TCA GGGGCACTATCC TTTATTTGATAACGT MADE_01612 1727428 - 1729296 + | homocysteine synthase TERM 1759 1729361 - 1729390 + F 100 -6.4 -5.72616 | AGGATGTTCTCCTTC TCCCGGGCCT TTCCTTACGC GGGCTCGGGA TTTTTTTATCTGCAT MADE_01613 1729497 - 1729943 + | hypothetical protein TERM 1760 1730018 - 1729999 - T 83 -9.3 -4.08394 | opp_overlap 1729999 ATAGCGTGTTTAAAA GGCAGAG GCGTTG CTCTGCC TTTTACATTAACGCT TERM 1761 1729999 - 1730018 + T 85 -9.3 -4.27584 | opp_overlap 1729999 ATAGCGTGTTTAAAA GGCAGAG GCGTTG CTCTGCC TTTTACATTAACGCT MADE_01614 1731168 - 1730047 - | xenobiotic reductase B TERM 1762 1731391 - 1731413 + r 95 -12.1 -4.63218 | opp_overlap 1731394 CGGTGATTACATTGA TAAGAGCGC TTAAT GCGCTCTTA TTTTATTGACGGGAA TERM 1763 1731410 - 1731394 - R 75 -9.4 -3.40299 | opp_overlap 1731391 TGATTACATTGATAA GAGCGC TTAAT GCGCTC TTATTTTATTGACGG MADE_01615 1732761 - 1731439 - | regulator of pathogenicity factors TERM 1764 1733297 - 1733267 - H 83 -7.6 -4.72272 | overlap 1733250 CGTTCTTATGAAAAA CAACGCCCCTTTGG TTT CCAAAGACACATTG CTCCCTTTTATATTG TERM 1765 1733466 - 1733481 + G 80 -6.2 -4.8048 | TGGCAATTCCTGCTG CGTTTA TCAA TAAACG TTTTTCGTATAAAAC MADE_01616 1733450 - 1734595 + | putative fucose permease TERM 1766 1734640 - 1734617 - T 100 -16.8 -2.83343 | opp_overlap 1734617 AGATGTACGACGATA GGGCCAATGG ATAA CCATTGGCCC TTTTTCTATGTCTTT TERM 1767 1734617 - 1734640 + T 100 -16.8 -5.1104 | opp_overlap 1734617 AGATGTACGACGATA GGGCCAATGG ATAA CCATTGGCCC TTTTTCTATGTCTTT MADE_01617 1735848 - 1734646 - | hypothetical protein TERM 1768 1735147 - 1735134 - G 72 -6.7 -4.25283 | ATTTGTCGAGTAAAA GTTGC TGAA GCAAC CCATTATGCGGGTTG TERM 1769 1735400 - 1735384 - G 90 -13.7 -3.3482 | opp_overlap 1735375 GAACGCTGGAACCAA GGGGGCA CCT TGCCCCC CTAGTGCGATATCTT TERM 1770 1735816 - 1735784 - G 80 -12.8 -3.04461 | gap 1, overlap 1735772 GAGGTATGCGTAATA TCGCATAGGACGGCG TCAA CGCCGTCC-ATGCTA GTGCCTGACATTAGG MADE_01618 1737181 - 1735856 - | Peptidase, M23/M37 family protein TERM 1771 1737389 - 1737362 - H 80 -10.5 -3.72893 | overlap 1737363 GAGGGCTGGAGCAAA CCCTCCACCGC AGGGAA GCGGTGGCGGA GCGCCCATGGATGGG TERM 1772 1737388 - 1737363 - H 81 -11.8 -2.83522 | overlap 1737362 AGGGCTGGAGCAAAC CCTCCACCGC AGGGAA GCGGTGGCGG AGCGCCCATGGATGG MADE_01619 1737400 - 1737540 + | hypothetical protein TERM 1773 1738582 - 1738566 - g 82 -7.3 -4.83169 | ACGCTTCCAGAAAAA TGCCATC CCT GATGACA TGCCCGAGCTTGAAA MADE_01620 1737610 - 1738809 + | tyrosyl-tRNA synthetase TERM 1774 1738835 - 1738854 + T 100 -13.6 -5.83822 | opp_overlap 1738835 AACTAGTATTTGAAA GCCCGCTT ATTT AAGCGGGC TTTTTTTTACCTATA TERM 1775 1738854 - 1738835 - T 95 -13.6 -3.6284 | opp_overlap 1738835 AACTAGTATTTGAAA GCCCGCTT ATTT AAGCGGGC TTTTTTTTACCTATA MADE_01621 1740347 - 1738989 - | putative oxidoreductase TERM 1776 1739341 - 1739355 + g 78 -4.9 -5.03994 | AAGCTTTTTACCATG GCGTC GTAAA GGCGC TTTTTCTCTGTCGCG TERM 1777 1740111 - 1740100 - G 80 -7.2 -4.64846 | overlap 1740102 CCAGAAAGGATAAAA CCGC CATT GCGG CCTGCACAGCCGAAC MADE_01622 1740943 - 1740374 - | acetyltransferase, GNAT family protein MADE_01623 1741382 - 1740981 - | hypothetical protein MADE_01624 1741947 - 1741537 - | putative phage shock protein E MADE_01625 1743037 - 1742111 - | ABC transporter, periplasmic substrate-binding protein, putative MADE_01626 1744057 - 1743113 - | adenosylcobinamide-phosphate synthase MADE_01627 1744760 - 1744059 - | 5-methylthioadenosine/S-adenosylhomocysteine nucleosidase TERM 1778 1744361 - 1744375 + g 72 -8.5 -3.76952 | AGACAATGCTTGCAG CCGCG GTACG CGCGG TTTCCATTAAGTGAG MADE_01628 1745512 - 1744925 - | hypothetical protein MADE_01629 1746164 - 1745724 - | hypothetical protein TERM 1779 1746309 - 1746331 + r 100 -16.4 -4.38154 | opp_overlap 1746309, overlap 1746328 GCCAAAACTAAAAAA GCTCGATAGC AGG GCTATCGAGC TTTTGTCAAAGGTCT TERM 1780 1746331 - 1746309 - R 100 -16.4 -5.46698 | opp_overlap 1746309 1746328 GCCAAAACTAAAAAA GCTCGATAGC AGG GCTATCGAGC TTTTGTCAAAGGTCT MADE_01630 1747774 - 1746359 - | glutamate synthase, small subunit TERM 1781 1747623 - 1747656 + g 100 -15.3 -3.6715 | opp_overlap 1747614 TCACAATACGGGTTG CCGCAGTCCAAGCAG CGGT CTGCTTGGCCTTCGG TTTGAGATTGGCTGA MADE_01631 1752170 - 1747788 - | glutamate synthase, large subunit TERM 1782 1750517 - 1750536 + g 72 -9.4 -3.55368 | GCGCGTATTGAAGCT CTACTACT TCTG AGTAGTAG TTGTCTGGGTTAAAT MADE_01632 1752929 - 1753876 + | N-acetylmuramoyl-L-alanine amidase, putative TERM 1783 1754175 - 1754194 + G 70 -5 -4.5123 | gap 1, overlap 1754176 ATTCTAACTATGCTG T-CGGCACC GTG GGTGCTGTA TTTCTTTAGTGAATT TERM 1784 1754176 - 1754192 + G 80 -10.1 -3.85603 | overlap 1754175 TTCTAACTATGCTGT CGGCACC GTG GGTGCTG TATTTCTTTAGTGAA MADE_01633 1753974 - 1756328 + | signal transduction histidine kinase TERM 1785 1756379 - 1756356 - f 70 -8.2 -3.68351 | opp_overlap 1756361, overlap 1756361 CCGTTAGCATTTAAA GAAAAGAGGG TTCG CCCTCTTTTT TGTTATTAGTCTTTT TERM 1786 1756374 - 1756361 - f 86 -8.1 -4.9138 | opp_overlap 1756361, overlap 1756356 AGCATTTAAAGAAAA GAGGG TTCG CCCTC TTTTTTGTTATTAGT TERM 1787 1756361 - 1756374 + F 100 -8.1 -5.66229 | opp_overlap 1756361 1756356 AGCATTTAAAGAAAA GAGGG TTCG CCCTC TTTTTTGTTATTAGT MADE_01634 1756416 - 1757015 + | hypothetical protein TERM 1788 1757219 - 1757230 + G 71 -3.6 -4.85267 | overlap 1757217 TCGCCAGAAGTATTA GCCG TTGC TGGC TTTTTGCTACTTTCT TERM 1789 1757537 - 1757525 - g 81 -3.3 -5.31275 | CTGTACGAGAAAAAA GCGCA CGA TTCGC CAAGCCCTGAACGAA MADE_01635 1757015 - 1758643 + | hypothetical protein TERM 1790 1758655 - 1758693 + T 77 -8.2 -4.20768 | gap 1, opp_overlap 1758644 1758659, overlap 1758659 GTAATGGCGTTTAAA TA-AAGCGCCACCGCCC ACAAAA GGGGGATGGCGCTTATA TTGTTTATTCACGCT TERM 1791 1758659 - 1758688 + T 86 -10.6 -3.96154 | opp_overlap 1758644 1758659, overlap 1758655 TGGCGTTTAAATAAA GCGCCACCGCCC ACAAAA GGGGGATGGCGC TTATATTGTTTATTC TERM 1792 1758688 - 1758659 - T 100 -12.8 -4.41348 | opp_overlap 1758659 1758655, overlap 1758644 TGGCGTTTAAATAAA GCGCCACCGCCC ACAAAA GGGGGATGGCGC TTATATTGTTTATTC MADE_01636 1759913 - 1758708 - | N-acylglucosamine 2-epimerase TERM 1793 1758774 - 1758784 + g 76 -4.6 -4.96762 | GTGATAATCGGTTTT GCCT ACA GGGC TTTTTGTGGTCTCTA TERM 1794 1759326 - 1759314 - G 72 -4.7 -4.56597 | overlap 1759299 1759316 GGCGCGTTCTAAAAA CGGAC CGT GACCG GTGGCCTCAAACGCC MADE_01637 1761227 - 1759926 - | hypothetical protein TERM 1795 1760311 - 1760295 - G 80 -7.2 -4.70266 | AAGACCAGCGAAAAA CGGCAG TAATC CCGCCG ATGTACGTGCTTTAC MADE_01638 1761966 - 1761322 - | hypothetical arginyl-tRNA:protein arginylyltransferase MADE_01639 1762709 - 1761963 - | leucyl/phenylalanyl-tRNA-protein transferase TERM 1796 1762739 - 1762720 - R 91 -7.8 -5.33848 | opp_overlap 1762720 ATCATAAGTAAAAAA GCCCCACA GTAA CGTAGGGC TTTCAAATAAGGTAC MADE_01640 1763687 - 1762755 - | thioredoxin reductase, FAD/NAD(P)-binding protein TERM 1797 1763740 - 1763752 + H 73 -10.5 -2.83747 | opp_overlap 1763737 1763734, overlap 1763737 CTCTCCAAATATTTC GCCCG AAT CGGGC TACTTATACAAATTC MADE_01641 1764299 - 1764748 + | hypothetical protein MADE_01642 1765263 - 1764808 - | hypothetical protein TERM 1798 1765162 - 1765150 - G 72 -4.7 -4.56597 | opp_overlap 1765150 1765151, overlap 1765151 GTTTTGTTGCAAAAA TGCGG TAC CCGCG TTTTTACCGGAACGT TERM 1799 1765150 - 1765162 + g 80 -6.9 -4.56775 | opp_overlap 1765150 1765151, overlap 1765151 GTTTTGTTGCAAAAA TGCGG TAC CCGCG TTTTTACCGGAACGT TERM 1800 1765279 - 1765241 - G 74 -10.5 -3.29471 | gap 1, opp_overlap 1765248, overlap 1765248 GCTTTATCATAGCAA CGAAAAACAGCGTCGGTA ATCA TA-CGACGCTGTTCTTGG GTTAAGTCATTTGAA TERM 1801 1765272 - 1765248 - G 100 -9.4 -4.91873 | gap 1, opp_overlap 1765248, overlap 1765241 CATAGCAACGAAAAA CAGCGTCGGTA ATCA TA-CGACGCTG TTCTTGGGTTAAGTC TERM 1802 1765248 - 1765272 + g 76 -9.4 -3.73783 | gap 1, opp_overlap 1765241 1765248 CATAGCAACGAAAAA CAGCGTCGGTA ATCA TA-CGACGCTG TTCTTGGGTTAAGTC MADE_01643 1767206 - 1765341 - | signal peptide peptidase SppA, 67K type TERM 1803 1765517 - 1765506 - G 72 -3 -5.00616 | opp_overlap 1765506 TGCTTGTCCAAAAAA TTCT TTCC AGAA TATTTCCTGAGCGGT MADE_01644 1767594 - 1767409 - | hypothetical protein MADE_01645 1767637 - 1768251 + | DoxX TERM 1804 1768287 - 1768304 + F 100 -7.7 -5.72622 | opp_overlap 1768287 ATTAACGCGCTAAAA GACCGGA TATT TCTGGTC TTTTTTGTTTATGGA MADE_01646 1768431 - 1768982 + | putative nitroreductase TERM 1805 1769056 - 1769092 + T 77 -10.3 -3.32844 | opp_overlap 1769054, overlap 1769060 AAATGCGAGTAGACC TTTAGACGTCACATAAT TCT AATATGTGACGTCTACG TTATAGCCTGCGAAC TERM 1806 1769060 - 1769088 + T 90 -13.3 -2.60079 | opp_overlap 1769054, overlap 1769056 GCGAGTAGACCTTTA GACGTCACATAAT TCT AATATGTGACGTC TACGTTATAGCCTGC MADE_01647 1769913 - 1769074 - | hypothetical protein TERM 1807 1769950 - 1769976 + r 75 -5.9 -4.70583 | gap 1, overlap 1769952 ACGTTGTCGTTTTAT TGCCTGCTAACG CAAA CGTT-GCAGGTG TTTTATGTTAATCGC TERM 1808 1769952 - 1769974 + r 77 -8.5 -3.9638 | gap 1, overlap 1769950 GTTGTCGTTTTATTG CCTGCTAACG CAAA CGTT-GCAGG TGTTTTATGTTAATC MADE_01648 1770991 - 1769984 - | cytoplasmic asparaginase I TERM 1809 1771229 - 1771214 - R 100 -9 -5.67967 | opp_overlap 1771214 ATGAGCACAAAAAAA GCGATG AAAT CATCGC TTTTTAAAATCTGCA TERM 1810 1771214 - 1771229 + r 88 -9 -4.64766 | opp_overlap 1771214 ATGAGCACAAAAAAA GCGATG AAAT CATCGC TTTTTAAAATCTGCA MADE_01649 1772251 - 1771289 - | Lipoyl synthase TERM 1811 1772046 - 1772066 + g 72 -5.5 -4.40963 | TTAGGGCAACTTGCT TCTTCAC ATACCGA GTGAAGA TTATTTTTGCGAAGT TERM 1812 1772088 - 1772100 + g 70 -4.9 -4.43844 | TTGCGAAGTGTTTTC TTGAT GTG ATCAA TTTTCTCGGTAGTAC MADE_01650 1772915 - 1772244 - | Lipoate-protein ligase B MADE_01651 1773179 - 1772916 - | hypothetical protein TERM 1813 1773242 - 1773217 - R 100 -13.4 -5.74122 | TATCATATAAAAAAA CGGCCAGATT GTAACA AATCTGGCCG CTTCACAACTAGCTT MADE_01652 1774483 - 1773299 - | D-alanyl-D-alanine carboxypeptidase MADE_01653 1774908 - 1774780 - | hypothetical protein MADE_01654 1775911 - 1774943 - | rare lipoprotein A MADE_01655 1776678 - 1775917 - | rod shape-determining protein RodA MADE_01656 1776899 - 1776678 - | Bacterial cell division membrane protein MADE_01657 1778812 - 1776899 - | cell elongation-specific transpeptidase of penicillin-binding protein 2 (peptidoglycan synthetase) TERM 1814 1778585 - 1778557 - G 74 -3.8 -4.98531 | CTTCCAAACTAAAAA CGGGGCGATTTT CTGCT AAAAGCACACCG TTACGATCGTAGATA MADE_01658 1779313 - 1778843 - | hypothetical protein MADE_01659 1779746 - 1779429 - | iojap domain protein MADE_01660 1780456 - 1779764 - | Nicotinic acid mononucleotide adenylyltransferase TERM 1815 1779955 - 1779965 + g 72 -3.2 -4.9218 | TACCTGCAGGTTCTG TGTG AAT CACG TTTTTGTCGTCGCTC MADE_01661 1781432 - 1780470 - | putative DNA polymerase III, delta subunit, probably ATP hydrolase MADE_01662 1782897 - 1781470 - | cell division protein FtsH MADE_01663 1783181 - 1782999 - | ribosomal RNA large subunit methyltransferase J MADE_01664 1783617 - 1783228 - | ribosomal RNA large subunit methyltransferase J (rRNA (uridine-2-O-)-methyltransferase) MADE_01665 1783713 - 1784006 + | RNA binding protein; ancient RNA-binding IF3-C fold TERM 1816 1784013 - 1784041 + F 90 -7.4 -5.3321 | overlap 1784014 1784016 1784017 CCAAAATAAGCGTTT TAATGGTGCCGA TCTTC TCGGCACCGTAG TTTTTCTTCTTACTT TERM 1817 1784014 - 1784040 + F 73 -8.7 -3.77486 | overlap 1784013 1784016 1784017 CAAAATAAGCGTTTT AATGGTGCCGA TCTTC TCGGCACCGTA GTTTTTCTTCTTACT TERM 1818 1784016 - 1784038 + F 88 -11.3 -3.44752 | overlap 1784014 1784013 1784017 AAATAAGCGTTTTAA TGGTGCCGA TCTTC TCGGCACCG TAGTTTTTCTTCTTA TERM 1819 1784017 - 1784037 + F 83 -12.6 -2.65224 | overlap 1784016 1784014 1784013 AATAAGCGTTTTAAT GGTGCCGA TCTTC TCGGCACC GTAGTTTTTCTTCTT MADE_01666 1784108 - 1784884 + | NAD-dependent epimerase/dehydratase:Short-chain dehydrogenase/reductase SDR MADE_01667 1785909 - 1784995 - | sensory box/GGDEF domain protein TERM 1820 1785750 - 1785776 + g 72 -5.8 -4.49377 | opp_overlap 1785750 1785748 AACTTTCGTAAAATA TCGAACTTGCCT TAG AGACGAGGTCGA TTATTTTCTTCTCAG MADE_01668 1786643 - 1785906 - | alpha/beta hydrolase MADE_01669 1786665 - 1786799 + | hypothetical protein MADE_01670 1789266 - 1786870 - | putative ATP-dependent protease TERM 1821 1787629 - 1787644 + g 80 -6.8 -4.62471 | gap 1, opp_overlap 1787628, overlap 1787632 TAGCGTTTGACTAAC GCGGCCG GTA CGG-CGC TTTTTCGCACTTAAC TERM 1822 1788923 - 1788942 + g 73 -7.8 -4.11216 | TCTTTTTGAAATGCC TTGCCGCC ACTT GGCGGAAA TTTTAGCGCTACGGG MADE_01671 1789552 - 1790187 + | hypothetical protein TERM 1823 1790194 - 1790210 + F 70 -9.5 -2.50859 | opp_overlap 1790192 1790190 1790194, overlap 1790193 1790190 1790188 AAGCGATAATAGAGA TGACCTA ATA TAGGTCA CTATGTATATTTTAC TERM 1824 1790210 - 1790194 - f 73 -9.5 -3.15861 | opp_overlap 1790194 1790193 1790190 1790188, overlap 1790192 1790190 AAGCGATAATAGAGA TGACCTA ATA TAGGTCA CTATGTATATTTTAC TERM 1825 1790397 - 1790383 - f 80 -10 -3.67792 | CTATATGTATGTAAA GTGGGA ATA TCCCAC GTGCGGTTAAATGGC TERM 1826 1790851 - 1790839 - g 71 -3.3 -4.82667 | opp_overlap 1790839 CGATTACATGAAAAA CCAGC TTC GCTCG TTGGGTTTTGGTTAC MADE_01672 1790507 - 1793110 + | leucyl-tRNA synthetase TERM 1827 1793286 - 1793245 - T 95 -13.8 -3.6502 | gap 1, opp_overlap 1793239 1793237, overlap 1793246 CAGTTGCCATTGAAA GTGC-TCGAGCACACGCGC CCCTT GCGCGTGCGCTCGATAAAC GCTTAAATGTTTACG TERM 1828 1793284 - 1793246 - T 95 -15.3 -2.78798 | opp_overlap 1793239 1793237, overlap 1793245 AGTTGCCATTGAAAG TGCTCGAGCACACGCGC CCCTT GCGCGTGCGCTCGATAA ACGCTTAAATGTTTA MADE_01673 1793882 - 1793304 - | Gamma-glutamyl phosphate reductase MADE_01674 1794988 - 1793879 - | gamma-glutamyl kinase MADE_01675 1796519 - 1795005 - | proline/sodium symporter TERM 1829 1795212 - 1795194 - G 75 -6.6 -4.39571 | GGCATAAATCCAAAA CAGCACGG TTA CCGCACCG CTCACCATACCTGCC TERM 1830 1795565 - 1795552 - G 85 -6.7 -5.14563 | GCGGCCATCAAAAAA CCACT AATA AGTGG ATGAAACAGCAATTG MADE_01676 1797983 - 1796961 - | DNA topoisomerase TERM 1831 1797635 - 1797614 - G 74 -5.7 -4.56159 | overlap 1797608 1797617 CTAATAAAAGACAAA CAAGCGCGC ATGC GCGCTCTAG CGTCCAGGAAGATTG TERM 1832 1797630 - 1797617 - G 87 -9.5 -4.34119 | overlap 1797614 1797608 ATAAAAGACAAACAA GCGCG CATG CGCGC TCTAGCGTCCAGGAA TERM 1833 1798367 - 1798357 - H 70 -2.6 -5.1166 | GATGAAAACGAAAAA TTTA AAC TAAA GTATAAAGCGTACAA MADE_01677 1798546 - 1799103 + | hypothetical protein TERM 1834 1799241 - 1799271 + F 79 -9.9 -3.72051 | opp_overlap 1799241 GCAATCATCTTAAGA GGCAATATACG AACCATTGG CGTATATTGCC TTTCGCGTTATTCAA TERM 1835 1799271 - 1799241 - f 72 -9.9 -3.08015 | opp_overlap 1799241 GCAATCATCTTAAGA GGCAATATACG AACCATTGG CGTATATTGCC TTTCGCGTTATTCAA TERM 1836 1800128 - 1800144 + G 72 -5.1 -4.71061 | opp_overlap 1800118 1800140, overlap 1800118 1800125 GAAGACGGCATAGCT CGCTTTT TAA GAGAGCG TTTTTCACTCTAGGT MADE_01678 1799327 - 1800157 + | haloacid dehalogenase-like hydrolase MADE_01679 1800998 - 1800270 - | 20-beta-hydroxysteroid dehydrogenase MADE_01680 1801525 - 1800995 - | hypothetical protein TERM 1837 1801057 - 1801045 - G 78 -4.8 -5.02777 | ATAGATAAAAACAAA GTGG GAACA CCAC GCTCCACACTAGGGC MADE_01681 1801668 - 1803305 + | methylglyoxal synthase MADE_01682 1803313 - 1804656 + | glutamate dehydrogenase TERM 1838 1805004 - 1805021 + G 73 -4.1 -4.84761 | overlap 1805006 GCTAGAGAGTCATGC TATCGCT GAAG AGCGACA TTTTTATACCCATCT MADE_01683 1804867 - 1805322 + | hypothetical protein TERM 1839 1805328 - 1805357 + F 72 -9.4 -3.04398 | opp_overlap 1805330 1805332 1805351, overlap 1805327 1805330 TACAGCCTAGTACTA GATAGCCTCACT GTCTAA AATGAGGCTATC GTTTTACGGCAACCA TERM 1840 1805405 - 1805377 - g 100 -10.4 -4.87291 | opp_overlap 1805382, overlap 1805351 1805382 TACGGCAACCAAAAA CAAAAGCCAGCT TTTAT AGCTGGCTTTTT TAATTTTTCACTTTG TERM 1841 1805400 - 1805382 - g 100 -10.3 -5.34655 | opp_overlap 1805382, overlap 1805351 1805377 CAACCAAAAACAAAA GCCAGCT TTTAT AGCTGGC TTTTTTAATTTTTCA TERM 1842 1805382 - 1805400 + G 100 -10.3 -5.54079 | opp_overlap 1805351 1805382 1805377 CAACCAAAAACAAAA GCCAGCT TTTAT AGCTGGC TTTTTTAATTTTTCA MADE_01684 1805347 - 1805475 + | hypothetical protein MADE_01685 1808021 - 1805832 - | predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain TERM 1843 1807997 - 1808010 + g 72 -5.3 -4.60041 | TTTCTGCTAACTGGA TATCG TGTT CGATA TTTTTAACCATAAGT TERM 1844 1808360 - 1808379 + r 93 -13.6 -3.08867 | opp_overlap 1808360 ATTTAAAGAAAAAAA GGCCAGCA TGCA TGCTGGCC TCTCTTCAAAGTTGG TERM 1845 1808379 - 1808360 - R 100 -13.6 -5.96894 | opp_overlap 1808360 ATTTAAAGAAAAAAA GGCCAGCA TGCA TGCTGGCC TCTCTTCAAAGTTGG MADE_01686 1808933 - 1808487 - | protein-export membrane protein secG(General Secretory Pathway) MADE_01687 1809642 - 1808944 - | triosephosphate isomerase TERM 1846 1809656 - 1809667 + r 70 -5.8 -4.32607 | ATTTTCCAATTACCA GCCA CGAA TGGC TTTCTTAGATTTTCA MADE_01688 1811127 - 1809784 - | PGM/PMM-family protein TERM 1847 1811172 - 1811183 + r 79 -5.8 -4.89063 | opp_overlap 1811172 TGTTCACGATATTAA CTGC ATCT GCAG TTTCTTTTTACGTCG MADE_01689 1812177 - 1811380 - | cytochrome c assembly protein TERM 1848 1811610 - 1811597 - G 76 -4.5 -4.98672 | overlap 1811598 TCTAAAAACACAAAA CCGCT GATT AGCGA CACAGTTAATAGTGA TERM 1849 1812211 - 1812223 + H 70 -9.1 -3.17051 | overlap 1812209 TGGGTGATGTGTTCA CCGAC TGA GTCGG TATTGATACTGCAAC TERM 1850 1813682 - 1813652 - g 74 -8.5 -3.84185 | gap 1, opp_overlap 1813660, overlap 1813647 1813654 GGTACGCAAATACAA GATGTAAACCGCTT GCTT AAGCAGTTTACA-C AAATGCAGAAAATGA TERM 1851 1813681 - 1813654 - g 88 -12.2 -3.50303 | opp_overlap 1813660, overlap 1813647 1813652 TACGCAAATACAAGA TGTAAACCGCTT GCTT AAGCAGTTTACA CAAATGCAGAAAATG MADE_01690 1812419 - 1813855 + | signal recognition particle protein TERM 1852 1813873 - 1813914 + F 93 -10.6 -5.10461 | gap 2, opp_overlap 1813882, overlap 1813882 AACCACGGTTACTCT TAATAAAAACCTCAACAGCA GCAA TGC-GTTGAGGTTTTT-TTA TTTTTGTTGCATCCA TERM 1853 1813882 - 1813906 + F 100 -9.4 -6.23317 | gap 1, opp_overlap 1813882, overlap 1813873 TACTCTTAATAAAAA CCTCAACAGCA GCAA TGC-GTTGAGG TTTTTTTATTTTTGT TERM 1854 1813906 - 1813882 - f 93 -9.4 -5.07486 | gap 1, opp_overlap 1813882 1813873 TACTCTTAATAAAAA CCTCAACAGCA GCAA TGC-GTTGAGG TTTTTTTATTTTTGT MADE_01691 1814026 - 1816104 + | putative serine rich repeat containing protein TERM 1855 1816228 - 1816196 - T 72 -8.4 -3.53597 | opp_overlap 1816192 1816196 1816211 1816214, overlap 1816194 1816219 ATAAGCATAATAAGA GCGGTACGCTTTCT CTAGT AAAAGGCGTGCCGC TTTTTAATATTAACT TERM 1856 1816196 - 1816228 + T 93 -10.6 -4.88228 | opp_overlap 1816196 1816194 1816219, overlap 1816192 1816211 1816214 ATAAGCATAATAAGA GCGGTACGCTTTCT CTAGT AAAAGGCGTGCCGC TTTTTAATATTAACT MADE_01692 1816455 - 1816258 - | hypothetical protein MADE_01693 1816722 - 1816510 - | hypothetical protein TERM 1857 1816683 - 1816671 - G 86 -4.1 -5.54079 | GTAAAAAGTAAAAAA GCACT TTA AGTAC TTCTACTAAGGGGGT TERM 1858 1818315 - 1818286 - g 71 -7.2 -4.16016 | TTACGCTGGAAGAAA TGTCTGCTGCTC GCCAAG AAGCAGCAGAAA ATAAAGCCGAGCAGC TERM 1859 1818636 - 1818621 - g 71 -10.4 -2.74515 | opp_overlap 1818621, overlap 1818620 AAAGAGTGTTCAAAT GCGCTC GATA GAGCGC GCGCTGCTTTCCAAC TERM 1860 1818659 - 1818687 + G 72 -8.9 -3.54424 | opp_overlap 1818657 1818662 1818680, overlap 1818662 TTTCCAACAAGAAGA GAAGGCCGTTAAT AAA ATTAACGGGCTAC TTTACCCCGGTGAAG TERM 1861 1818684 - 1818662 - g 77 -9.2 -3.90645 | opp_overlap 1818662 1818659, overlap 1818657 1818680 CCAACAAGAAGAGAA GGCCGTTAAT AAA ATTAACGGGC TACTTTACCCCGGTG TERM 1862 1819731 - 1819713 - g 71 -7.4 -3.95042 | overlap 1819714 1819729 AAAACCTTAAGTAAA TCGTTAGC TAA GCTAACGC TGCATGCAGGGGATG TERM 1863 1819730 - 1819714 - g 75 -10.9 -2.95941 | overlap 1819713 1819729 AAACCTTAAGTAAAT CGTTAGC TAA GCTAACG CTGCATGCAGGGGAT MADE_01694 1817085 - 1820795 + | hypothetical protein MADE_01695 1820792 - 1821427 + | hypothetical protein TERM 1864 1821619 - 1821601 - g 77 -11 -3.29211 | overlap 1821596 1821614 GAAGCGCAAAGTGAA CTGCGCCT TAA AAGCGCAG TGCGTACGCTTTTAG TERM 1865 1821760 - 1821730 - g 73 -7.7 -4.14977 | overlap 1821731 GAACATTATAAAGAA GCGCTTCATTACA ACAAA TATAATGAAGCGG CTGCGCACATGAGTG TERM 1866 1821759 - 1821731 - g 75 -11.2 -3.07902 | overlap 1821730 AACATTATAAAGAAG CGCTTCATTACA ACAAA TATAATGAAGCG GCTGCGCACATGAGT MADE_01696 1821424 - 1822641 + | hypothetical protein MADE_01697 1823048 - 1823374 + | hypothetical protein TERM 1867 1823429 - 1823448 + G 73 -11.4 -2.75252 | overlap 1823425 ATATTTAGTTTTTAT GCGGCACG TTTG TGTGCCGC TACTGTTGCCCTAAT MADE_01698 1823408 - 1824643 + | lipoprotein, putative TERM 1868 1824712 - 1824657 - T 81 -2.8 -5.68039 | gap 1, opp_overlap 1824657 AAAGCCATAAAAAAA CCTAAACCCTGGTTTCATCTATTTA TAACGAG CAAATAG-TGAGACATGGATTTAGG TTTTTCTGCATAGGG MADE_01699 1827867 - 1824751 - | RND family efflux transporter TERM 1869 1826363 - 1826375 + g 74 -5.5 -4.72188 | GTTTTGCTAAATAGG CCGGT TTT ACTGG TTTGTTTTACCTTCA TERM 1870 1826495 - 1826483 - G 70 -4.7 -4.42464 | AATTCTCTAAACAAA CGCCC TGC GGTCG AAGGCAAAAACGCAA MADE_01700 1828855 - 1827869 - | RND family efflux system membrane fusion protein MADE_01701 1830938 - 1829061 - | ABC transporter, ATP-binding/permease protein, putative TERM 1871 1829534 - 1829565 + g 73 -10.9 -2.66812 | overlap 1829531 CAAAGACCACGGGTT CTTGCGTGACCAC CGCAAT GTGGTGACGCAGG TGCTCTACTGGCATT MADE_01702 1831064 - 1831276 + | hypothetical protein MADE_01703 1831727 - 1831302 - | hypothetical protein MADE_01704 1831729 - 1831842 + | hypothetical protein TERM 1872 1832104 - 1832145 + F 79 -11.1 -3.17723 | gap 1 CCGTATAATTCGGCG GCCTTCCAATTGGCGTCTAA TTT TTAGACGTTAAAT-GAAGGC TTAAGTTAACGGTAA MADE_01705 1832185 - 1832436 + | 30S ribosomal protein S16 MADE_01706 1832460 - 1832981 + | 16S rRNA-processing protein MADE_01707 1832982 - 1833743 + | tRNA (guanine-N(1)-)-methyltransferase MADE_01708 1833759 - 1834121 + | 50S ribosomal subunit protein L19 TERM 1873 1834152 - 1834182 + F 100 -17.8 -2.73483 | opp_overlap 1834160, overlap 1834160 CGTTATTGTTAACTT CGAAAAAACCCGCT TCA AGCGGGTTTTTTTG TGCTTAAAATCCGAT TERM 1874 1834160 - 1834174 + F 100 -11.4 -5.71983 | opp_overlap 1834160, overlap 1834152 TTAACTTCGAAAAAA CCCGCT TCA AGCGGG TTTTTTTGTGCTTAA TERM 1875 1834174 - 1834160 - f 95 -11.4 -5.055 | opp_overlap 1834152 1834160 TTAACTTCGAAAAAA CCCGCT TCA AGCGGG TTTTTTTGTGCTTAA MADE_01709 1834251 - 1834901 + | hypothetical protein MADE_01710 1835690 - 1834974 - | putative enoyl-CoA hydratase TERM 1876 1835742 - 1835731 - H 72 -4.4 -4.79752 | TGCAATAATACAAAA TCCT TGAG AGGA ATGAGAAATTTAGCT MADE_01711 1836062 - 1837150 + | 3-deoxy-7-phosphoheptulonate synthase TERM 1877 1837244 - 1837273 + G 83 -12.9 -3.14132 | opp_overlap 1837245 ACGCTGCGTGAAGGT ATCGACGAGCTGG ACTC TCAGCTCGTCGAG TTACTCGCAAAACGC TERM 1878 1837272 - 1837245 - g 90 -15.7 -2.52464 | opp_overlap 1837244 CGCTGCGTGAAGGTA TCGACGAGCTG GACTCT CAGCTCGTCGA GTTACTCGCAAAACG TERM 1879 1838294 - 1838282 - g 76 -4.1 -5.06451 | GACTACGCGAAAAAA TGCCT GGT AGACA GCAAACAAATGTTGT MADE_01712 1837193 - 1838347 + | bifunctional chorismate mutase T/prephenate dehydrogenase TERM 1880 1838404 - 1838376 - T 89 -10.3 -4.26188 | opp_overlap 1838381, overlap 1838381 GCGACATAGGTAAAA CGAAAGGCGAGCT TAA AGCTCGCCTTTTT GTACTAGTCAGCTAA TERM 1881 1838381 - 1838399 + T 100 -14.6 -4.93296 | opp_overlap 1838381 1838376 ATAGGTAAAACGAAA GGCGAGCT TAA AGCTCGCC TTTTTGTACTAGTCA TERM 1882 1838399 - 1838381 - T 100 -14.6 -4.22524 | opp_overlap 1838381, overlap 1838376 ATAGGTAAAACGAAA GGCGAGCT TAA AGCTCGCC TTTTTGTACTAGTCA MADE_01713 1839589 - 1838408 - | chorismate mutase/prephenate dehydratase TERM 1883 1839635 - 1839650 + r 89 -10.4 -4.29738 | opp_overlap 1839635 TCTGCTAAAAAAAAA CCTCCC GGGT GGGAGG TTTTCATGCATGTAG TERM 1884 1839650 - 1839635 - R 100 -10.4 -6.06723 | opp_overlap 1839635 TCTGCTAAAAAAAAA CCTCCC GGGT GGGAGG TTTTCATGCATGTAG TERM 1885 1839782 - 1839796 + r 85 -5.8 -5.22006 | GTCAACCCATTTTTA CAATAA GTG TTATTG TTTTTGTTATGGTGC MADE_01714 1840530 - 1839901 - | chemotaxis protein CheY/response regulator receiver domain protein TERM 1886 1840541 - 1840551 + r 75 -8.2 -4.07568 | CTCATGATAAGGTCG GCGC CGT GCGC TTTTACAGCAGAACG MADE_01715 1841094 - 1840762 - | Sui1 family protein MADE_01716 1841266 - 1841571 + | putative anti-sigma factor antagonist MADE_01717 1841558 - 1843264 + | putative response regulator MADE_01718 1843486 - 1843866 + | hypothetical protein MADE_01719 1844092 - 1846113 + | diguanylate cyclase/phosphodiesterase TERM 1887 1846119 - 1846164 + F 88 -8.5 -4.67607 | gap 1, opp_overlap 1846162, overlap 1846101 1846120 1846162 GATGGCCTAGCACCG C-CTACTGTGAACCTTTAACAG CTA TTGTTATGGTTTCACAGTAGTG TTTCTTTATTGCAAC TERM 1888 1846120 - 1846162 + F 91 -12.2 -3.94772 | overlap 1846119 ATGGCCTAGCACCGC CTACTGTGAACCTTTAACAG CTA TTGTTATGGTTTCACAGTAG TGTTTCTTTATTGCA MADE_01720 1846419 - 1846697 + | calcium-binding EF-hand protein TERM 1889 1847623 - 1847597 - g 71 -7.2 -4.1822 | opp_overlap 1847602, overlap 1847598 GGCGAGCTGAACAAA GGGCAGCGAGAG GTT CTCTCGCTACTT ACAGCAAGTACCCAA TERM 1890 1847622 - 1847598 - g 73 -10.7 -3.10611 | opp_overlap 1847602, overlap 1847597 GCGAGCTGAACAAAG GGCAGCGAGAG GTT CTCTCGCTACT TACAGCAAGTACCCA TERM 1891 1847602 - 1847618 + G 78 -12.3 -2.71144 | opp_overlap 1847598 1847597 GCTGAACAAAGGGCA GCGAGAG GTT CTCTCGC TACTTACAGCAAGTA MADE_01721 1846748 - 1848157 + | two-component system sensor kinase MADE_01722 1848160 - 1848744 + | hypothetical protein MADE_01723 1848741 - 1850081 + | two-component system response regulator MADE_01724 1850243 - 1850425 + | Flagellin MADE_01725 1850912 - 1850610 - | two-component hybrid sensor and regulator TERM 1892 1851139 - 1851127 - R 70 -3.4 -4.93696 | opp_overlap 1851127 TCTAAATATGAAAAA CTAG ACCCA CTAG TTTACAGTTTAATTA MADE_01726 1852004 - 1851171 - | hypothetical protein TERM 1893 1851271 - 1851261 - G 72 -5.4 -4.4388 | ATATAAATCAATAAA TTGC TGG GCAA GCCAAGGGGCGTCTT MADE_01727 1852253 - 1854013 + | aspartyl-tRNA synthetase TERM 1894 1854038 - 1854080 + G 83 -10 -4.07568 | gap 1, opp_overlap 1854065, overlap 1854041 TATAAGAAGCCTGAA TCTGCACT-GGTAGTGTTG TTTGAT CAACACTACCAAGTGCTGC TTTTACAGCGACAAG TERM 1895 1854041 - 1854077 + G 88 -14.7 -3.08032 | gap 1, opp_overlap 1854065, overlap 1854038 AAGAAGCCTGAATCT GCACT-GGTAGTGTTG TTTGAT CAACACTACCAAGTGC TGCTTTTACAGCGAC MADE_01728 1854017 - 1854457 + | dATP pyrophosphohydrolase MADE_01729 1854457 - 1854897 + | Holliday junction resolvase TERM 1896 1856228 - 1856213 - g 72 -3.2 -5.04249 | opp_overlap 1856214 1856217 1856218, overlap 1856214 GCGCGAAAAAAGAAA TGGTTG AAGC CAACCT TCGTCTTGTAATCTC MADE_01730 1855084 - 1856919 + | RNA polymerase sigma factor TERM 1897 1856920 - 1856932 + T 71 -4.9 -4.55697 | opp_overlap 1856920 TTCTTAGACGAATAG GTTAA GGC TTAAC TTTATTTGTAAAAAT TERM 1898 1856947 - 1856964 + T 100 -11.3 -5.63504 | opp_overlap 1856947 CTTTATTTGTAAAAA TCCCCAG CTTG CTGGGGA TTTTTTTATGCGCTT TERM 1899 1856964 - 1856947 - T 93 -11.3 -4.59773 | opp_overlap 1856947 CTTTATTTGTAAAAA TCCCCAG CTTG CTGGGGA TTTTTTTATGCGCTT TERM 1900 1857048 - 1857063 + T 80 -10.4 -3.64487 | opp_overlap 1857048 TCTGCCCACAAAAAA GCCTCC TTGC GGAGGC TTGTTACGCATGTAA TERM 1901 1857063 - 1857048 - T 100 -10.4 -5.24129 | opp_overlap 1857048 TCTGCCCACAAAAAA GCCTCC TTGC GGAGGC TTGTTACGCATGTAA MADE_01731 1858766 - 1857147 - | Methyl-accepting chemotaxis protein TERM 1902 1858900 - 1858871 - R 93 -10.7 -4.6635 | overlap 1858873 AAATCTTTAATAAAA TTTGGCCTCGCAC TATC ACGCGAGGCCATA GTAGACACTTAGAAC TERM 1903 1858898 - 1858873 - R 90 -13.3 -2.62512 | overlap 1858871 ATCTTTAATAAAATT TGGCCTCGCAC TATC ACGCGAGGCCA TAGTAGACACTTAGA MADE_01732 1860063 - 1858909 - | gram negative topoisomerase IV, subunit B MADE_01733 1860531 - 1860124 - | ABC-type phosphate transport system, periplasmic component TERM 1904 1860285 - 1860302 + g 72 -2.7 -4.96388 | gap 1, opp_overlap 1860283, overlap 1860278 GTTTTGACCAAAACG CAGTAAGC TGA GCT-GCTG TTTTGTTTAATACTT MADE_01734 1860695 - 1860528 - | hypothetical protein TERM 1905 1861022 - 1860999 - R 73 -8.8 -3.64049 | overlap 1861001 1861002 CCAATAACGGGGAAA TACGCAGGGC TTAC GCCCTGCAAA AAACTTAATCTTCCC TERM 1906 1861020 - 1861001 - R 85 -11.4 -3.39429 | overlap 1860999 1861002 AATAACGGGGAAATA CGCAGGGC TTAC GCCCTGCA AAAAACTTAATCTTC TERM 1907 1861019 - 1861002 - R 83 -12.7 -2.62935 | overlap 1861001 1860999 ATAACGGGGAAATAC GCAGGGC TTAC GCCCTGC AAAAAACTTAATCTT MADE_01735 1864134 - 1861027 - | RND family efflux transporter TERM 1908 1862888 - 1862874 - G 73 -7.8 -4.08767 | opp_overlap 1862874, overlap 1862876 GGTACGCTGCCAAAA TAGGCG GCT CGCCCA TTTCGATGCGTCGGT MADE_01736 1865195 - 1864146 - | HlyD family secretion protein MADE_01737 1865558 - 1865992 + | MutT/nudix family protein MADE_01738 1866058 - 1866825 + | class II aldolase/adducin-like protein MADE_01739 1866894 - 1868078 + | mandelate racemase/muconate lactonizing enzyme family protein MADE_01740 1868970 - 1868095 - | amidohydrolase 2 TERM 1909 1868168 - 1868134 - G 100 -13.6 -4.41047 | opp_overlap 1868131 1868136, overlap 1868136 AGCGTTTAATGAAAA TAGCGCCGCCTTTTGA TGT TCACAAAGCGGCGCTG TCATATTAAGAAAGC TERM 1910 1868136 - 1868166 + g 84 -14 -2.9155 | opp_overlap 1868134 1868136, overlap 1868131 CGTTTAATGAAAATA GCGCCGCCTTTTGA TGT TCACAAAGCGGCGC TGTCATATTAAGAAA TERM 1911 1868166 - 1868136 - G 100 -16.2 -3.8125 | opp_overlap 1868136 1868131, overlap 1868134 CGTTTAATGAAAATA GCGCCGCCTTTTGA TGT TCACAAAGCGGCGC TGTCATATTAAGAAA TERM 1912 1868299 - 1868317 + g 86 -8.8 -4.39571 | overlap 1868313 AAGAGGTTGGGCACG CCGCCACT GCC AGTTGCGG TTTTGCATTTCTAGC MADE_01741 1869816 - 1868995 - | oxidoreductase, short-chain dehydrogenase/reductase family protein TERM 1913 1870078 - 1870088 + G 80 -5.4 -5.06816 | opp_overlap 1870078 ACCATGCCCCAACAA CTGA TTT TCAG TTTTTATTAAAAGAT MADE_01742 1870053 - 1871813 + | probable acyl-CoA dehydrogenase TERM 1914 1871907 - 1871852 - T 100 -15.8 -3.30243 | gap 1, opp_overlap 1871858 1871869, overlap 1871828 1871853 1871869 ATCTACTTCTGATAA GCCGAAGGC-ACAAAAAAGGTCACTTC ATT GAAGTGACCTTTTTTATTGCCTTAAGT CTCTGCTTGCAATGT TERM 1915 1871906 - 1871853 - T 100 -19.3 -2.57931 | gap 1, opp_overlap 1871858 1871869, overlap 1871828 1871852 1871869 TCTACTTCTGATAAG CCGAAGGC-ACAAAAAAGGTCACTTC ATT GAAGTGACCTTTTTTATTGCCTTAAG TCTCTGCTTGCAATG TERM 1916 1871858 - 1871901 + T 100 -17.8 -3.17685 | gap 1, opp_overlap 1871853 1871852 1871869, overlap 1871869 TTCTGATAAGCCGAA GGC-ACAAAAAAGGTCACTTC ATT GAAGTGACCTTTTTTATTGCC TTAAGTCTCTGCTTG TERM 1917 1871889 - 1871869 - T 100 -14.1 -5.31456 | opp_overlap 1871869 1871858, overlap 1871853 1871852 CGAAGGCACAAAAAA GGTCACTTC ATT GAAGTGACC TTTTTTATTGCCTTA TERM 1918 1871869 - 1871889 + T 100 -14.1 -5.5074 | opp_overlap 1871853 1871852 1871869, overlap 1871858 CGAAGGCACAAAAAA GGTCACTTC ATT GAAGTGACC TTTTTTATTGCCTTA MADE_01743 1872455 - 1871937 - | hypothetical protein MADE_01744 1872866 - 1872594 - | hypothetical protein TERM 1919 1873295 - 1873276 - H 79 -9.4 -3.63968 | CGTGAAATTTCTAAA CTTTCAGT ATTG ACTGAAAG TCCTAAAAGTTAGAT TERM 1920 1873433 - 1873416 - H 78 -4.1 -5.30155 | overlap 1873419 CTATGAATGAAAAAA TACCGGT AAAG ACCGTTA CGCCGGTAAAAGTGC TERM 1921 1873734 - 1873746 + G 71 -7.7 -3.95073 | opp_overlap 1873726 1873724 ACAAACATTCTTAAC GTCGT GGA ACGAC TTTATGCATATCGGC MADE_01745 1873528 - 1874826 + | hypothetical protein MADE_01746 1874918 - 1876372 + | D-mannonate oxidoreductase MADE_01747 1876411 - 1877391 + | IS5 transposase TERM 1922 1877410 - 1877394 - T 77 -9.4 -3.54307 | opp_overlap 1877393, overlap 1877404 AAGATCTGTCTGAAA TCCGGG AATAG CCCGGA ATTAGGTCGAAATCC TERM 1923 1877602 - 1877563 - T 95 -13.2 -3.44529 | opp_overlap 1877572, overlap 1877567 1877572 TTAGATACTAATTAA TAAATAAAAGGAGAGTTA ATAT TAACTCTCCTTTTTTTCA TCTTGAAAAGAAAAA TERM 1924 1877598 - 1877567 - T 95 -11.8 -4.35339 | opp_overlap 1877572, overlap 1877563 1877572 ATACTAATTAATAAA TAAAAGGAGAGTTA ATAT TAACTCTCCTTTTT TTCATCTTGAAAAGA TERM 1925 1877593 - 1877572 - T 100 -11.7 -5.13527 | opp_overlap 1877572, overlap 1877567 1877563 AATTAATAAATAAAA GGAGAGTTA ATAT TAACTCTCC TTTTTTTCATCTTGA TERM 1926 1877572 - 1877593 + T 100 -11.7 -5.63374 | opp_overlap 1877567 1877563 1877572 AATTAATAAATAAAA GGAGAGTTA ATAT TAACTCTCC TTTTTTTCATCTTGA TERM 1927 1877634 - 1877619 - T 100 -10.4 -5.79595 | opp_overlap 1877619 CTTGAAAAGAAAAAA GCGACC CGGA GGTCGC TTCTTAAAGTGCAGA TERM 1928 1877619 - 1877634 + T 80 -10.4 -3.65046 | opp_overlap 1877619 CTTGAAAAGAAAAAA GCGACC CGGA GGTCGC TTCTTAAAGTGCAGA MADE_01748 1878088 - 1877696 - | hypothetical protein TERM 1929 1878260 - 1878276 + r 86 -9.4 -4.08216 | opp_overlap 1878247 1878260 AAGCGCAATAAAAAA GCGCTC TGGGT GAGCGC TTTTAGGCAGGGTGG TERM 1930 1878276 - 1878260 - R 100 -9.4 -5.4756 | opp_overlap 1878260, overlap 1878247 AAGCGCAATAAAAAA GCGCTC TGGGT GAGCGC TTTTAGGCAGGGTGG MADE_01749 1879195 - 1878293 - | Transcriptional Regulator, LysR family protein MADE_01750 1879416 - 1879877 + | Acyl dehydratase TERM 1931 1879957 - 1879990 + T 83 -11.1 -3.75024 | opp_overlap 1879959, overlap 1879959 AAACTAAGCACAAAA AAGCCTGATGAAGAA CGCA TCCTTCATCAGGCTA TTGTTGATAGTAGAG TERM 1932 1879988 - 1879959 - T 100 -15.9 -5.38249 | opp_overlap 1879957 1879959 ACTAAGCACAAAAAA GCCTGATGAAGAA CGCA TCCTTCATCAGGC TATTGTTGATAGTAG TERM 1933 1879959 - 1879988 + T 95 -13.7 -3.45742 | opp_overlap 1879959, overlap 1879957 ACTAAGCACAAAAAA GCCTGATGAAGAA CGCA TCCTTCATCAGGC TATTGTTGATAGTAG MADE_01751 1880200 - 1880036 - | hypothetical protein MADE_01752 1881205 - 1880219 - | putative mechanosensitive channel protein (MscS family) TERM 1934 1882726 - 1882740 + G 80 -7.1 -4.56597 | CCGCAAAACCCGTTT GGCCA GTCTG TGGCC TTTTTCGGAAGAGCA MADE_01753 1881625 - 1884330 + | TonB-dependent receptor TERM 1935 1884353 - 1884384 + F 100 -10.2 -5.32565 | opp_overlap 1884353 CGTTGCACCTATAAA GTCGACCTAGTG AGTCACAA CGCTAGGTCGGC TTTTTTAATTGCTTG MADE_01754 1884521 - 1884823 + | putative pterin-4-alpha-carbinolamine dehydratase protein TERM 1936 1885373 - 1885388 + F 100 -10.4 -5.93252 | opp_overlap 1885373 CAACCACATTAAAAA CCCAGC ATTT GCTGGG TTTTTTCTTTTTCGC TERM 1937 1885388 - 1885373 - f 93 -10.4 -4.84274 | opp_overlap 1885373 CAACCACATTAAAAA CCCAGC ATTT GCTGGG TTTTTTCTTTTTCGC TERM 1938 1886426 - 1886412 - g 76 -4.2 -4.92783 | AAGGCATCATAAAAA CGGC TAACCCT GCCG TAGAACATATTTATG TERM 1939 1887142 - 1887112 - g 93 -8.8 -4.87133 | opp_overlap 1887112, overlap 1887121 AGCCGCGAAAGAAAA GGCAGAGCAGGCTG CCG CAGCCCGTACGGCC TTCTTAGCAAATATG TERM 1940 1887112 - 1887142 + G 72 -8.8 -3.63073 | opp_overlap 1887112 1887121 AGCCGCGAAAGAAAA GGCAGAGCAGGCTG CCG CAGCCCGTACGGCC TTCTTAGCAAATATG TERM 1941 1888286 - 1888264 - g 79 -7.6 -4.52703 | GAAAGTATCAGAAAA CGCGCTGCCA ACG CAGCATCGCG CATCTACACTCAGTG MADE_01755 1885532 - 1888867 + | putative two-component member protein MADE_01756 1888870 - 1889883 + | Response regulator CheB (receptor modification enzyme, protein-glutamate methylesterase) TERM 1942 1890083 - 1890100 + G 100 -9.8 -5.29716 | opp_overlap 1890083 AGAATTTTAATAAAA GCCCCG CTAGTC CGGGGC TTTTTGTTGTATTAA TERM 1943 1890100 - 1890083 - g 93 -9.8 -4.68705 | opp_overlap 1890083 AGAATTTTAATAAAA GCCCCG CTAGTC CGGGGC TTTTTGTTGTATTAA MADE_01757 1889921 - 1890115 + | hypothetical protein TERM 1944 1890155 - 1890167 + G 91 -6.9 -5.54079 | opp_overlap 1890154 CGGGTGATGACAGAT GGGCT TTA GGCCC TTTTTTCGTTTTTGG TERM 1945 1890638 - 1890624 - g 73 -4.2 -4.74706 | opp_overlap 1890629, overlap 1890629 GCGAATATCGAAAAA GGTAAC GTT GTTCCC ACGTTCGATTAACGG MADE_01758 1890153 - 1890650 + | hypothetical protein MADE_01759 1890696 - 1892192 + | transcription elongation factor NusA TERM 1946 1894196 - 1894181 - g 72 -6.2 -4.24404 | AGCGAAACTTGAAAA CATGTT TGCG AACATG GAATCAGGTGATGTT TERM 1947 1894371 - 1894345 - g 79 -9.5 -3.68351 | opp_overlap 1894359 1894368 GTGGTATCACTGAAA CTGACGCAACT CTTGC AGCTGCATCAG GTGCTATCGTACTTG MADE_01760 1892217 - 1894823 + | translation initiation factor IF-2 TERM 1948 1894847 - 1894877 + F 73 -10.5 -2.91264 | opp_overlap 1894853, overlap 1894853 GTTAATTCGGCATGT GAAAAACGGGGGC CGAGT GCTCCCGTTTTTG TCTGTACCTAAAGCG TERM 1949 1894871 - 1894853 - f 81 -7.3 -4.62069 | opp_overlap 1894847 1894853 TCGGCATGTGAAAAA CGGGGGC CGAGT GCTCCCG TTTTTGTCTGTACCT TERM 1950 1894853 - 1894871 + F 93 -9.5 -5.04597 | opp_overlap 1894853, overlap 1894847 TCGGCATGTGAAAAA CGGGGGC CGAGT GCTCCCG TTTTTGTCTGTACCT MADE_01761 1894941 - 1895342 + | ribosome-binding factor A MADE_01762 1895343 - 1896314 + | tRNA pseudouridine synthase B TERM 1951 1896378 - 1896358 - f 100 -16.9 -3.55071 | opp_overlap 1896358 TTATACTCGTTTAAA GCCTTGCGG TTA CCGCAAGGC TTTTTTATTGGCAGA TERM 1952 1896358 - 1896378 + F 100 -16.9 -5.4505 | opp_overlap 1896358 TTATACTCGTTTAAA GCCTTGCGG TTA CCGCAAGGC TTTTTTATTGGCAGA MADE_01763 1896509 - 1897795 + | hypothetical protein MADE_01764 1897907 - 1898176 + | 30S ribosomal protein S15 TERM 1953 1898187 - 1898217 + T 91 -13.4 -3.0246 | opp_overlap 1898195, overlap 1898195 GATAAGACTAGGTTT CAAGAAAAGCGCCC AAT GGGCGCTTTTTTTC TGTGTGAATTTTATT TERM 1954 1898195 - 1898209 + T 100 -12.8 -5.76633 | opp_overlap 1898195, overlap 1898187 TAGGTTTCAAGAAAA GCGCCC AAT GGGCGC TTTTTTTCTGTGTGA TERM 1955 1898209 - 1898195 - T 100 -12.8 -4.63932 | opp_overlap 1898187 1898195 TAGGTTTCAAGAAAA GCGCCC AAT GGGCGC TTTTTTTCTGTGTGA MADE_01765 1899111 - 1898365 - | RNA pseudouridine synthase family protein TERM 1956 1899205 - 1899181 - R 100 -12.9 -5.47431 | opp_overlap 1899181 1899182, overlap 1899182 CTAATACATAAAAAA TGAAAGGGGCA CAT TGCCCCTTTCG TTTCTTCGTTTAACA TERM 1957 1899181 - 1899205 + r 100 -15.1 -4.39696 | opp_overlap 1899181 1899182, overlap 1899182 CTAATACATAAAAAA TGAAAGGGGCA CAT TGCCCCTTTCG TTTCTTCGTTTAACA TERM 1958 1899182 - 1899204 + r 100 -16.4 -3.23094 | opp_overlap 1899181 1899182, overlap 1899181 TAATACATAAAAAAT GAAAGGGGCA CAT TGCCCCTTTC GTTTCTTCGTTTAAC TERM 1959 1899204 - 1899182 - R 100 -16.4 -3.86832 | opp_overlap 1899182 1899181, overlap 1899181 TAATACATAAAAAAT GAAAGGGGCA CAT TGCCCCTTTC GTTTCTTCGTTTAAC MADE_01766 1900074 - 1899265 - | hypothetical protein MADE_01767 1901846 - 1900290 - | predicted amidohydrolase TERM 1960 1900499 - 1900482 - G 72 -5.5 -4.49311 | opp_overlap 1900484 ATCACTAGGAGAAAA TACGGCC GTTT GCCCGTA CTGTATGTCTACATT TERM 1961 1901844 - 1901858 + g 72 -6.4 -4.23104 | TGTTTGATCTTGACT CATGGG TTA CTCATG TTTGTTACGCTTTAC MADE_01768 1902129 - 1902800 + | oxidoreductase, 2OG-Fe(II) oxygenase family protein TERM 1962 1903819 - 1903831 + G 72 -6.3 -4.36914 | TTTTAACGTACGATT TACTG GCG CAGTA TTTTATAGAAAAAGA TERM 1963 1903973 - 1903959 - g 76 -2.1 -5.33785 | gap 1, overlap 1903949 1903960 AATCACGACAAAAAA GGCCAG CTTT CTG-CC GTTCAAAACATGGCA MADE_01769 1903086 - 1904771 + | response regulator receiver protein TERM 1964 1904805 - 1904861 + T 95 -13.2 -3.4456 | gap 1, opp_overlap 1904803 1904824, overlap 1904824 AAATAGAAAATTATG GTGATGCGCCATTG-AAAAAGCTGCCT TTAA AGGCAGCTTTTTACGTTTGCGGGTCAC ATTTTGTTAATGTGA TERM 1965 1904824 - 1904841 + T 95 -11.3 -4.81249 | opp_overlap 1904824, overlap 1904805 TGCGCCATTGAAAAA GCTGCCT TTAA AGGCAGC TTTTTACGTTTGCGG TERM 1966 1904841 - 1904824 - T 93 -11.3 -4.65895 | opp_overlap 1904805 1904824 TGCGCCATTGAAAAA GCTGCCT TTAA AGGCAGC TTTTTACGTTTGCGG MADE_01770 1907491 - 1904900 - | predicted extracellular nuclease MADE_01771 1907543 - 1907728 + | hypothetical protein MADE_01772 1909140 - 1907812 - | hypothetical protein TERM 1967 1909057 - 1909030 - G 72 -6.4 -4.37092 | gap 1, opp_overlap 1909037 1909038, overlap 1909037 1909038 ACTTCCTCGATAAAA CACAAA-AGGGCT TGA AGCCATCTTTGTG TGCTTAGCTAGCTGT TERM 1968 1909049 - 1909037 - G 74 -3.3 -4.94487 | opp_overlap 1909037 1909038, overlap 1909030 1909038 CGATAAAACACAAAA GGGCT TGA AGCCA TCTTTGTGTGCTTAG MADE_01773 1909348 - 1909157 - | hypothetical protein MADE_01774 1909446 - 1910009 + | Peroxiredoxin TERM 1969 1910023 - 1910005 - f 76 -7.5 -4.21462 | overlap 1910010 ACCTAGTAGGTAAAA TCTAAGC GTCTT GCTTAGA GGCCGATAATGCCGT TERM 1970 1910074 - 1910102 + F 77 -10.4 -3.36581 | gap 1, opp_overlap 1910078, overlap 1910061 1910075 1910078 CATTGGCAACGTTTA TAT-AGGGAGCGG GTCT CCGCTCCCTGATG TTAATTCCCAATTTC TERM 1971 1910075 - 1910100 + F 79 -11.1 -3.24597 | opp_overlap 1910078, overlap 1910074 1910061 1910078 ATTGGCAACGTTTAT ATAGGGAGCGG GTCT CCGCTCCCTGA TGTTAATTCCCAATT TERM 1972 1910078 - 1910097 + F 95 -15 -2.80699 | opp_overlap 1910078, overlap 1910075 1910074 1910061 GGCAACGTTTATATA GGGAGCGG GTCT CCGCTCCC TGATGTTAATTCCCA TERM 1973 1910097 - 1910078 - f 95 -15 -2.89742 | opp_overlap 1910075 1910074 1910061 1910078 GGCAACGTTTATATA GGGAGCGG GTCT CCGCTCCC TGATGTTAATTCCCA TERM 1974 1911439 - 1911415 - g 93 -9.3 -4.78107 | CACTATTATTAAAAA TGCAGCGACCC GTC AGATCACTGCA GAAAATGGCAAAGTG MADE_01775 1910186 - 1911775 + | probable alkyl hydroperoxide reductase subunit F TERM 1975 1911809 - 1911833 + F 100 -15.1 -5.85244 | opp_overlap 1911809 CCTACCAATCAAAAA GCCGAACTGAC CAT GTTAGTTCGGC TTTTTTGTTTTCCTT TERM 1976 1911833 - 1911809 - f 100 -12.9 -4.90266 | opp_overlap 1911809 CCTACCAATCAAAAA GCCGAACTGAC CAT GTTAGTTCGGC TTTTTTGTTTTCCTT MADE_01776 1911993 - 1912640 + | hypothetical protein TERM 1977 1912685 - 1912673 - g 83 -6.3 -5.03713 | AATAACCAAACAAAA TGCAT TAA ATGCA CATACGTGGGTAGGC MADE_01777 1912650 - 1914143 + | Aspartate kinase MADE_01778 1914222 - 1914106 - | hypothetical protein TERM 1978 1914162 - 1914207 + g 100 -21.3 -5.80951 | GCGTTAACGTTAACC GCGCAGTTAGCGTCTGCCCGT GAGA ACGCGTAGGCGCTAATTGCGC TTTTTTCTTTTCCAT MADE_01779 1915045 - 1914467 - | Coq7 family protein MADE_01780 1915197 - 1916351 + | hypothetical protein TERM 1979 1917250 - 1917262 + G 80 -6.3 -4.73613 | opp_overlap 1917250 CCAAAGTGTTAAGCA TCAAC GGC GTTGA TTTTGTTAATGATAA TERM 1980 1918254 - 1918235 - g 70 -5 -4.4767 | GCAGGCAGGACAAAA GCTTATTG CCAT CGATAAGC CACAAACACGCAAAG MADE_01781 1916658 - 1918325 + | peptidase S41 MADE_01782 1918325 - 1918729 + | putative orphan protein; putative signal peptide TERM 1981 1918755 - 1918782 + T 100 -15.6 -5.10497 | opp_overlap 1918756, overlap 1918756 CTTTATAAATGCAAA ACGCCCAGCGTT GACT AACGCTGGGCGC TTTTTTAGCTGCGTT TERM 1982 1918756 - 1918781 + T 100 -19.1 -3.65214 | opp_overlap 1918756, overlap 1918755 TTTATAAATGCAAAA CGCCCAGCGTT GACT AACGCTGGGCG CTTTTTTAGCTGCGT TERM 1983 1918781 - 1918756 - T 100 -19.1 -4.39571 | opp_overlap 1918756 1918755 TTTATAAATGCAAAA CGCCCAGCGTT GACT AACGCTGGGCG CTTTTTTAGCTGCGT MADE_01783 1921178 - 1918803 - | hypothetical protein TERM 1984 1918969 - 1918986 + g 79 -4 -5.10461 | overlap 1918971 CCTTGCTGCTTATTG CTGCCG TTATTT CGGCTG TTTTTATTGCCTACA TERM 1985 1920477 - 1920497 + g 71 -7.5 -3.9281 | TGAGGTAGAGTCCAC GCCTTGCCA CTC TGGCAGTGC TTCTTTAACGATAAT TERM 1986 1920812 - 1920824 + g 77 -3.3 -5.26918 | overlap 1920811 CAGGCGTGTAGGCAT CGTCG TGG CGAAG TTTTTTATCCGATGT TERM 1987 1921163 - 1921146 - G 80 -6.9 -4.65916 | opp_overlap 1921148, overlap 1921148 TTTAGGGTAAGAAAA CAGGCCG CGGT CGGCCTT AATGGTGGCTTGCAT TERM 1988 1921148 - 1921161 + g 71 -9.5 -3.2327 | opp_overlap 1921146 1921148 TAGGGTAAGAAAACA GGCCG CGGT CGGCC TTAATGGTGGCTTGC TERM 1989 1921161 - 1921148 - G 80 -9.5 -3.94438 | opp_overlap 1921148, overlap 1921146 TAGGGTAAGAAAACA GGCCG CGGT CGGCC TTAATGGTGGCTTGC MADE_01784 1921412 - 1921960 + | hypothetical protein MADE_01785 1922456 - 1922046 - | hypothetical protein TERM 1990 1922103 - 1922093 - G 77 -6.8 -4.4261 | overlap 1922100 CGCGCAACAGGAAAA GTGC AAA GCAC GCGCCCCACATAGGC TERM 1991 1922652 - 1922631 - g 71 -3.7 -4.8622 | gap 1, overlap 1922633 1922636 1922637 CTCGTTAATGAAAAA GATAACCGGC CTT GCC-GTTAGC ACACTCACACTTGCA MADE_01786 1922623 - 1924962 + | putative TonB dependent receptor TERM 1992 1925064 - 1925088 + G 70 -10.8 -2.52464 | opp_overlap 1925052 1925050 ATAGCTATTTAACCC TCGAGGGAAT GAAAG GTTCCCTCGA TACGTTCAAAAGCCA TERM 1993 1925254 - 1925278 + G 100 -10.7 -4.80882 | overlap 1925255 1925256 TATTGTGTCGTTTGC TTCCAGCGTAG GGG CTACGCTGGCG TTTTTAGTATCCCGT TERM 1994 1925255 - 1925277 + G 86 -12 -3.47806 | overlap 1925254 1925256 ATTGTGTCGTTTGCT TCCAGCGTAG GGG CTACGCTGGC GTTTTTAGTATCCCG TERM 1995 1925256 - 1925276 + G 90 -15.5 -2.68202 | overlap 1925255 1925254 TTGTGTCGTTTGCTT CCAGCGTAG GGG CTACGCTGG CGTTTTTAGTATCCC TERM 1996 1926507 - 1926520 + G 74 -8.1 -3.92324 | overlap 1926496 1926495 CGGTGGGCCGTAAGG CCCGT TTAA ACGGG TTTGGTCTTGAAGAC MADE_01787 1924979 - 1927132 + | mercuric reductase (Hg(II) reductase) TERM 1997 1927222 - 1927268 + G 82 -8 -4.62069 | opp_overlap 1927229, overlap 1927224 GGTATTTCAGCATCG CGTAGAATTGCAGCAGGCAGCA TAG TGCTGTTTGCTGCAAGCGTAAG TTTTTACGCTAGCGC TERM 1998 1927261 - 1927229 - g 86 -13.5 -3.30441 | opp_overlap 1927224 1927222 CAGCATCGCGTAGAA TTGCAGCAGGCAGCA TAG TGCTGTTTGCTGCAA GCGTAAGTTTTTACG MADE_01788 1927162 - 1928043 + | hypothetical protein TERM 1999 1928133 - 1928168 + F 71 -4.8 -4.64591 | overlap 1928134 1928136 1928160 GCCCGTTGTTCTTTT CCACTATGCAGGTA TTCCTTTT TACCTGCATAGTCA TTTTGTCTGTGCTTG TERM 2000 1928134 - 1928167 + F 70 -8.3 -3.3767 | overlap 1928133 1928136 1928160 CCCGTTGTTCTTTTC CACTATGCAGGTA TTCCTTTT TACCTGCATAGTC ATTTTGTCTGTGCTT TERM 2001 1928136 - 1928165 + F 79 -10.9 -3.24281 | overlap 1928134 1928133 1928160 CGTTGTTCTTTTCCA CTATGCAGGTA TTCCTTTT TACCTGCATAG TCATTTTGTCTGTGC TERM 2002 1929245 - 1929233 - g 77 -3.3 -5.1101 | GCATTATTTAAAAAA GAGGC AGT GCATC CATCGGCACTCGATA MADE_01789 1928201 - 1929355 + | putative ABC-type transport system, periplasmic component TERM 2003 1930586 - 1930599 + G 71 -3.8 -4.8543 | TTTTACCACTATTAG TGCC CGGAGT GGCA TTTTTATACGGGTTA TERM 2004 1930672 - 1930698 + G 70 -2.2 -5.03994 | CACACCTACATTGCG CACATGGTGTAT GTT GTTCCCTATGTG TTTTTGTCTATGGCG MADE_01790 1929355 - 1931100 + | putative ABC-type transport system, permease component MADE_01791 1931090 - 1931728 + | putative ABC transporter ATP-binding protein MADE_01792 1931722 - 1932378 + | putative CDP-alcohol phosphatidyltransferase MADE_01793 1932572 - 1933369 + | putative C-5 sterol desaturase MADE_01794 1933435 - 1933343 - | hypothetical protein MADE_01795 1933604 - 1933437 - | endonuclease MADE_01796 1934305 - 1933730 - | Exopolysaccharide synthesis, ExoD MADE_01797 1934405 - 1934773 + | hypothetical protein MADE_01798 1934790 - 1935161 + | response regulator TERM 2005 1935267 - 1935318 + F 85 -5.4 -5.32599 | opp_overlap 1935270 1935298, overlap 1935270 1935283 1935289 TTACACCACTTTAAA TAGTCACATGTTATTTTGTGATTA AAAG TAATCACATTTTAATATGTGATTG TTTTTGTATTTTATG TERM 2006 1935270 - 1935315 + F 83 -7.1 -4.69512 | opp_overlap 1935270 1935298, overlap 1935267 1935283 1935289 CACCACTTTAAATAG TCACATGTTATTTTGTGATTA AAAG TAATCACATTTTAATATGTGA TTGTTTTTGTATTTT TERM 2007 1935283 - 1935302 + F 80 -8 -4.4084 | opp_overlap 1935270 1935298, overlap 1935270 1935267 1935289 AGTCACATGTTATTT TGTGATTA AAAG TAATCACA TTTTAATATGTGATT MADE_01799 1935403 - 1936161 + | hypothetical protein MADE_01800 1936225 - 1937067 + | hypothetical protein MADE_01801 1937605 - 1937147 - | hypothetical protein MADE_01802 1937762 - 1937923 + | hypothetical transcriptional regulator, LysR family protein MADE_01803 1937920 - 1938447 + | transcriptional regulator, LysR family protein TERM 2008 1938683 - 1938655 - g 79 -4 -5.24129 | TGTTTTCATAAAAAA GCTTC-AGCACGAA ATA TTC-TGCCCGAAGC GCAATAAGAGAAAAA TERM 2009 1938942 - 1938932 - g 82 -5.4 -5.17786 | opp_overlap 1938941 GAACAAAAGCAAAAA GTTG ATG CAAC AGGCGGCCCTGCTAT MADE_01804 1938596 - 1939927 + | hypothetical protein TERM 2010 1939957 - 1939979 + T 100 -15 -5.77853 | opp_overlap 1939959 AGTTTTAACGCGAGA GAGGCTTACT GTT AGTAAGCCTC TTTTTTTTACCCGTT TERM 2011 1939977 - 1939959 - T 81 -11.8 -2.91681 | opp_overlap 1939957 TTTTAACGCGAGAGA GGCTTACT GTT AGTAAGCC TCTTTTTTTTACCCG MADE_01805 1941324 - 1940014 - | hypothetical protein TERM 2012 1940850 - 1940862 + g 72 -4.8 -4.68645 | opp_overlap 1940845, overlap 1940845 GTAAATCAAAGCGGC GAGC TTCCC GCTC TTTTGCTTTTAAATC MADE_01806 1942763 - 1941321 - | Delta 1-pyrroline-5-carboxylate reductase MADE_01807 1943482 - 1942760 - | ABC transporter, ATP-binding protein TERM 2013 1943444 - 1943423 - G 71 -9.5 -3.13109 | gap 1, overlap 1943422 TAGATTATCTAAAAG CGTGCG-GTT TTC AACGCGCACG GTCAACGCATCTGCG TERM 2014 1943641 - 1943622 - H 100 -13.6 -3.89756 | opp_overlap 1943622 AGCTGAAACGAACAA GGCTTGCC GAGT GGCAAGCC TTTGAAAGTGGTGGA TERM 2015 1943622 - 1943641 + H 95 -13.6 -3.58343 | opp_overlap 1943622 AGCTGAAACGAACAA GGCTTGCC GAGT GGCAAGCC TTTGAAAGTGGTGGA MADE_01808 1944449 - 1945618 + | oxidoreductase, FMN-binding protein TERM 2016 1945702 - 1945744 + T 76 -7 -4.41633 | opp_overlap 1945714, overlap 1945699 1945714 ATTTATTTGCTACAG CGAATAGAAAAACACAGCGT TAA ACGCTGTGTTTCATCATCCG TTCTTTTTGGCGCTG TERM 2017 1945714 - 1945732 + T 100 -13.2 -3.80461 | opp_overlap 1945714, overlap 1945702 1945699 CAGCGAATAGAAAAA CACAGCGT TAA ACGCTGTG TTTCATCATCCGTTC TERM 2018 1945732 - 1945714 - T 100 -13.2 -5.10767 | opp_overlap 1945714 1945702 1945699 CAGCGAATAGAAAAA CACAGCGT TAA ACGCTGTG TTTCATCATCCGTTC MADE_01809 1946200 - 1945721 - | SsrA-binding protein MADE_01810 1946337 - 1946777 + | cyclase/dehydrase MADE_01811 1946774 - 1947121 + | hypothetical protein TERM 2019 1947152 - 1947172 + T 100 -14.1 -4.63218 | opp_overlap 1947152 CAACAGAAATAAAAA TGGCCTTCA AAT TGAAGGCCA TTTTGTTAAGAAGAA TERM 2020 1947172 - 1947152 - T 100 -14.1 -5.4659 | opp_overlap 1947152 CAACAGAAATAAAAA TGGCCTTCA AAT TGAAGGCCA TTTTGTTAAGAAGAA MADE_01812 1947670 - 1947194 - | transcriptional regulator, MarR family protein MADE_01813 1949673 - 1947703 - | Choline-glycine betaine transporter TERM 2021 1950184 - 1950203 + H 100 -11.4 -5.46629 | opp_overlap 1950184, overlap 1950199 GCTTCATAATAAAAA GCGCTGAC ATTC GTCGGCGC TTTTTTTCGCCTATT TERM 2022 1950203 - 1950184 - H 93 -9.2 -5.18726 | opp_overlap 1950184 1950199 GCTTCATAATAAAAA GCGCTGAC ATTC GTCGGCGC TTTTTTTCGCCTATT MADE_01814 1950254 - 1951201 + | MscS Mechanosensitive ion channel MADE_01815 1951802 - 1951248 - | restriction endonuclease MADE_01816 1952296 - 1953231 + | polyribonucleotide nucleotidyltransferase TERM 2023 1953455 - 1953473 + G 71 -7.4 -3.89346 | opp_overlap 1953453, overlap 1953456 AGTGAAGAAGAATTC CCGTACGT AGT ACGTGTGG TTTCTGAAATCACAG MADE_01817 1953245 - 1954306 + | Polynucleotide phosphorylase TERM 2024 1954343 - 1954371 + T 100 -14.7 -3.24879 | opp_overlap 1954350, overlap 1954350 GTTAGTTATGTTTAA GTAAAAAGGGAGC TTG GCTCCCTTTTTTC GTTTTAGGTTTTAAA TERM 2025 1954364 - 1954350 - T 95 -11.4 -4.86621 | opp_overlap 1954343 1954350 ATGTTTAAGTAAAAA GGGAGC TTG GCTCCC TTTTTTCGTTTTAGG TERM 2026 1954350 - 1954364 + T 100 -11.4 -5.46698 | opp_overlap 1954350, overlap 1954343 ATGTTTAAGTAAAAA GGGAGC TTG GCTCCC TTTTTTCGTTTTAGG MADE_01818 1954442 - 1954329 - | hypothetical protein TERM 2027 1954529 - 1954512 - g 79 -10.5 -3.55181 | opp_overlap 1954512 CAAACCGAAGTAGAA GCAGCGG TATT CCGCCGC TTAGTAGAACACCTA MADE_01819 1954482 - 1954775 + | Deoxycytidine triphosphate deaminase TERM 2028 1954812 - 1954797 - T 77 -10.4 -3.26947 | opp_overlap 1954797 TAATTTGTATATGAA GCCAGC GAAA GCTGGC TTTTTTGTGCTTGGC TERM 2029 1954797 - 1954812 + T 100 -10.4 -5.37345 | opp_overlap 1954797 TAATTTGTATATGAA GCCAGC GAAA GCTGGC TTTTTTGTGCTTGGC MADE_01820 1955313 - 1955176 - | hypothetical protein TERM 2030 1956684 - 1956706 + G 71 -7 -4.03234 | opp_overlap 1956688, overlap 1956688 CTATACGGGTTATAT TGAAGCCAGT AAT ACTGGCTTAG TTTATATGCAGGCAC TERM 2031 1956702 - 1956688 - g 71 -10 -3.1247 | opp_overlap 1956684 1956688 ACGGGTTATATTGAA GCCAGT AAT ACTGGC TTAGTTTATATGCAG TERM 2032 1956688 - 1956702 + G 75 -10 -3.65294 | opp_overlap 1956688, overlap 1956684 ACGGGTTATATTGAA GCCAGT AAT ACTGGC TTAGTTTATATGCAG MADE_01821 1955545 - 1956762 + | hypothetical protein TERM 2033 1957295 - 1957315 + G 80 -6.1 -4.7497 | opp_overlap 1957295 GAAATACACCAAAAG CACCTGATC GCC GATTTGGTG TTTTTAATAAATGAG MADE_01822 1957196 - 1957390 + | hypothetical protein TERM 2034 1957413 - 1957401 - f 81 -2.6 -5.64873 | opp_overlap 1957410 TGTAAGAAGAAAAAA GGAG AAGTG CCCC AAAATGGTGTGGATT MADE_01823 1957471 - 1958073 + | Methyltransferase type 11 MADE_01824 1958205 - 1958411 + | hypothetical protein MADE_01825 1958565 - 1959230 + | hypothetical protein MADE_01826 1960525 - 1959488 - | ISCps1, transposase TERM 2035 1960328 - 1960314 - G 87 -11.4 -3.83998 | opp_overlap 1960314 TTAGCTGATATTAAA CGGGCA TCA TGCCCG TATTCACGCGCACAT TERM 2036 1960314 - 1960328 + g 75 -11.4 -3.01791 | opp_overlap 1960314 TTAGCTGATATTAAA CGGGCA TCA TGCCCG TATTCACGCGCACAT MADE_01827 1960688 - 1961068 + | hypothetical protein MADE_01828 1961195 - 1962295 + | beta-lactamase precursor MADE_01829 1962323 - 1962703 + | Glyoxalase/dioxygenase superfamily protein MADE_01830 1963867 - 1963622 - | CcdA protein TERM 2037 1963680 - 1963693 + g 77 -3.7 -5.1285 | ATGAACTCGTTGTAC GCAGC TATG GCAGC TTTGTTTTCTTTTTT MADE_01831 1964824 - 1964009 - | hypothetical protein TERM 2038 1965266 - 1965235 - g 71 -9.6 -3.19192 | gap 1, overlap 1965237 GTTGAGGTAAGTGAA TACTGCCGGAAAAAG GGC CTTTTCCCGG-AGCA AATCCAGCAATGGAA TERM 2039 1965264 - 1965237 - g 71 -10 -3.1585 | gap 1, overlap 1965235 TGAGGTAAGTGAATA CTGCCGGAAAAAG GGC CTTTTCCCGG-AG CAAATCCAGCAATGG MADE_01832 1964989 - 1965480 + | transposase IS3/IS911 family protein MADE_01833 1965693 - 1966520 + | putative transposase TERM 2040 1967145 - 1967114 - g 71 -9.6 -3.19192 | gap 1, overlap 1967116 GTTGAGGTAAGTGAA TACTGCCGGAAAAAG GGC CTTTTCCCGG-AGCA AATCCAGCAATGGAA TERM 2041 1967143 - 1967116 - g 71 -10 -3.1585 | gap 1, overlap 1967114 TGAGGTAAGTGAATA CTGCCGGAAAAAG GGC CTTTTCCCGG-AG CAAATCCAGCAATGG MADE_01834 1966868 - 1967359 + | transposase IS3/IS911 family protein MADE_01835 1967572 - 1968399 + | putative transposase MADE_01836 1968436 - 1968654 + | hypothetical protein MADE_01837 1968709 - 1969092 + | hypothetical protein MADE_01838 1969195 - 1969425 + | hypothetical protein MADE_01839 1969440 - 1969691 + | hypothetical protein MADE_01840 1969737 - 1970273 + | hypothetical protein MADE_01841 1970364 - 1970639 + | hypothetical protein MADE_01842 1970736 - 1970852 + | hypothetical protein MADE_01843 1971008 - 1971319 + | hypothetical protein TERM 2042 1971421 - 1971387 - T 74 -4.3 -4.85433 | gap 2, opp_overlap 1971387 ATAGAAACGCAAAAA CGAGGCT--GGCTGGTT TGG AAGCGGCCTGAGCCTCG TTAAATGCAGAATAT MADE_01844 1971922 - 1971449 - | Cytidine deaminase MADE_01845 1972085 - 1972894 + | TPR domain protein TERM 2043 1972925 - 1972940 + G 77 -9 -3.9461 | CGAGGCTTATTTTTA GCAGTG TTCG CACTGC TTATTGTTGCGGGCG MADE_01846 1972907 - 1974496 + | hypothetical protein TERM 2044 1974565 - 1974527 - T 76 -7.4 -4.27796 | opp_overlap 1974528 1974529, overlap 1974528 1974530 TAACAAAGCTCAAAA TTACTCTGCACTTACCTA ATA CAGGTGAGTGCAGAGCGT TTCAGATACAACGCA TERM 2045 1974528 - 1974564 + T 90 -12.4 -3.59979 | opp_overlap 1974528 1974527 1974530, overlap 1974529 AACAAAGCTCAAAAT TACTCTGCACTTACCT AATAC AGGTGAGTGCAGAGCG TTTCAGATACAACGC TERM 2046 1974564 - 1974528 - T 79 -10.9 -3.15593 | opp_overlap 1974528 1974529, overlap 1974527 1974530 AACAAAGCTCAAAAT TACTCTGCACTTACCTA ATA CAGGTGAGTGCAGAGCG TTTCAGATACAACGC TERM 2047 1974529 - 1974563 + T 91 -13.7 -2.75844 | opp_overlap 1974528 1974527 1974530, overlap 1974528 ACAAAGCTCAAAATT ACTCTGCACTTACCT AATAC AGGTGAGTGCAGAGC GTTTCAGATACAACG TERM 2048 1974562 - 1974530 - T 100 -15.7 -3.1236 | opp_overlap 1974529 1974528, overlap 1974528 1974527 CAAAGCTCAAAATTA CTCTGCACTTACCTA ATA CAGGTGAGTGCAGAG CGTTTCAGATACAAC MADE_01847 1975320 - 1974583 - | putative sulfate transport protein CysZ TERM 2049 1975028 - 1975014 - G 73 -11.4 -2.69151 | overlap 1975011 CTTTTTCAGAGAGTA CGCCGT TAA ACGGCG CGGCAATCCAGTTCG TERM 2050 1975997 - 1976034 + G 79 -9.9 -3.6761 | gap 1, opp_overlap 1975985, overlap 1975995 AGAGCAAGGTATGAT CTCGCGGCTCATTGAGTC TAA GCCTCAA-GAGCTTCGAG TGTTTATTGAAGAGG TERM 2051 1976497 - 1976468 - g 78 -5.7 -4.77165 | overlap 1976472 1976493 TCGGCTAGAACAAAA TGCACTTCACGCT AAAC AGCGCAAAGCCCA AGTTGAGCAAGAGTT TERM 2052 1976971 - 1976951 - g 74 -6.9 -4.19953 | overlap 1976952 TAGCGAATTGGAAAA CGAACAAGA AAG CCTTGTTCA AGCACAACAATCAAA MADE_01848 1975551 - 1979138 + | Chromosome segregation ATPase, sms TERM 2053 1979443 - 1979406 - g 87 -10.5 -4.14739 | TTAGTCATGCTAAAA GCGCTTCCGACGAGCCG GCTA CGCCTCGTGACAAGCGC GCTATAGAAGAGACT TERM 2054 1979964 - 1979954 - g 76 -4.6 -5.05113 | CGTACAGAAACAAAA CGCG CCG CGCA AAAATTCTACGTAGA TERM 2055 1979992 - 1979969 - g 74 -5.4 -4.56597 | gap 1 CGCGCCGCGCAAAAA TTCTA-CGTAG ATC CCACGCTAGAA GAGGAAGAACACCAA MADE_01849 1979159 - 1980757 + | putative cell division protein ZipA TERM 2056 1980819 - 1980851 + F 79 -10.7 -3.13403 | opp_overlap 1980824, overlap 1980824 GTTGGCAGCGTTGTT AAAAAGGACTTGGCT TAT ACCCAAGTCCTTTTC TGTTAATAAGCGAAG TERM 2057 1980824 - 1980846 + F 93 -10.6 -4.70583 | opp_overlap 1980824, overlap 1980819 CAGCGTTGTTAAAAA GGACTTGGCT TAT ACCCAAGTCC TTTTCTGTTAATAAG TERM 2058 1980846 - 1980824 - f 91 -10.6 -4.57073 | opp_overlap 1980824 1980819 CAGCGTTGTTAAAAA GGACTTGGCT TAT ACCCAAGTCC TTTTCTGTTAATAAG TERM 2059 1981052 - 1981035 - gf 79 -2.7 -5.43866 | CAAGCTCGAAAAAAA GTTGC CGAACTGC GCAAC ACCTTAAACGAATAT MADE_01850 1981002 - 1981517 + | NAD-dependent DNA ligase MADE_01851 1981484 - 1983037 + | DNA ligase, NAD-dependent TERM 2060 1983121 - 1983103 - T 100 -13.2 -5.26875 | opp_overlap 1983103 CCGTGAATCAAAAAA CGCCACTT CAA AAGTGGCG TTTTTATTTTTACGA TERM 2061 1983103 - 1983121 + T 100 -13.2 -5.61881 | opp_overlap 1983103 CCGTGAATCAAAAAA CGCCACTT CAA AAGTGGCG TTTTTATTTTTACGA MADE_01852 1983731 - 1983207 - | flagellar biosynthesis protein FlhF MADE_01853 1983950 - 1983822 - | hypothetical protein TERM 2062 1984243 - 1984254 + GH 75 -5.8 -4.67011 | opp_overlap 1984240 1984242, overlap 1984240 1984240 TTACTTAACAATGAG CGCA CCGC TGCG TTTTTAAATAGGGTT TERM 2063 1984271 - 1984281 + GH 75 -3.2 -5.1675 | TTTTAAATAGGGTTC CGTT TTC AGCG TTTTTTAGTCAATAC TERM 2064 1984493 - 1984483 - gH 76 -2.4 -5.41746 | opp_overlap 1984483 1984490 AAGGCGCTAAAAAAA CCGG CTA CCTG TTTGCACAATGGTGA TERM 2065 1984909 - 1984930 + GH 82 -8.8 -4.15543 | opp_overlap 1984907 GCGTTAGGGAACATT CACGCAAT CTTTAA ATTGCGTG TTTTAAGCCTGTTTA MADE_01854 1983940 - 1986543 + | DNA internalization-related competence protein ComEC/Rec2 MADE_01855 1986796 - 1988004 + | ABC-type multidrug transport system, ATPase and permease component MADE_01856 1987992 - 1988381 + | transport ATP-binding protein MsbA MADE_01857 1988378 - 1989427 + | tetraacyldisaccharide 4-kinase MADE_01858 1989417 - 1989611 + | hypothetical protein TERM 2066 1990296 - 1990284 - g 76 -7.7 -4.30719 | opp_overlap 1990292 GTGCTTTAGAACAAA TCGAG TCA CTCGA GCAACTTCGGGCTAT MADE_01859 1989665 - 1990411 + | 3-deoxy-manno-octulosonate cytidylyltransferase TERM 2067 1990931 - 1990917 - g 70 -5 -4.48263 | CAGACAACAGTAAAA TTGCGA TGA TCACAA GTCGTATGGGATCGA MADE_01860 1990559 - 1991218 + | Short chain dehydrogenase family protein TERM 2068 1991319 - 1991292 - T 90 -7.1 -5.23292 | gap 1, opp_overlap 1991292 GTAGATAAAATAAAA CCCTATCG-TGA ATACG CCATCGATAGGG TTTCTAGACTAGCTT MADE_01861 1992823 - 1991366 - | MiaB-like tRNA modifying enzyme YliG TERM 2069 1992108 - 1992122 + g 72 -8.6 -3.71913 | overlap 1992107 ACCGGCATGCCGTTC CAGAAC CCT GTTCTG TGTTTTACATCTACA MADE_01862 1993213 - 1993683 + | hypothetical protein MADE_01863 1994134 - 1993721 - | hypothetical protein MADE_01864 1994223 - 1994336 + | hypothetical protein MADE_01865 1995128 - 1994352 - | HesA/MoeB/ThiF family protein TERM 2070 1995325 - 1995310 - H 71 -6.2 -4.16284 | ACATGTTTTAATAAA CTCATT TTTT AATGAG ATAGAAAAAAGGGGC MADE_01866 1995347 - 1996309 + | predicted glutathione S-transferase MADE_01867 1996346 - 1997209 + | Pirin-like protein TERM 2071 1997475 - 1997463 - f 72 -4.7 -4.7373 | opp_overlap 1997464, overlap 1997464 CGATGTCATCAAAAA GGCGC TTA GCGCT TTAAGGTCGTAAAAA TERM 2072 1997464 - 1997474 + F 70 -8.2 -3.62096 | opp_overlap 1997464 1997463 GATGTCATCAAAAAG GCGC TTA GCGC TTTAAGGTCGTAAAA TERM 2073 1998718 - 1998707 - g 70 -2.2 -5.04249 | GCGTGAAAAAACAAA CGCT AGCA AGCA TGGTTAAAGCGCGTA MADE_01868 1997539 - 1998999 + | phosphomannomutase TERM 2074 1999050 - 1999078 + T 95 -8.3 -5.37593 | gap 1, opp_overlap 1999049 ATGTGAAAACGATAG GGCGACAATACT TTTAAT AGT-TTGTCGCC TTTTTTGATTTGAGA MADE_01869 1999622 - 1999200 - | hypothetical protein TERM 2075 1999682 - 1999652 - R 100 -13.5 -4.18161 | opp_overlap 1999658, overlap 1999658 TACAAATTTCTAAAA CAAAAATAGCGCC ATAGA GGCGCTATTTTTA CTATCAAGGGTAATA TERM 2076 1999658 - 1999676 + r 93 -10.3 -4.8048 | opp_overlap 1999658 1999652 TTTCTAAAACAAAAA TAGCGCC ATAGA GGCGCTA TTTTTACTATCAAGG TERM 2077 1999676 - 1999658 - R 100 -10.3 -5.45802 | opp_overlap 1999658, overlap 1999652 TTTCTAAAACAAAAA TAGCGCC ATAGA GGCGCTA TTTTTACTATCAAGG MADE_01870 2000987 - 1999710 - | Citrate synthase MADE_01871 2001788 - 2002066 + | putative succinate dehydrogenase, hydrophobic subunit, cytochrome b556 with sdhD MADE_01872 2002060 - 2002407 + | putative succinate dehydrogenase, hydrophobic subunit, cytochrome b556 with sdhC MADE_01873 2002409 - 2004181 + | succinate dehydrogenase catalytic subunit(fumarrate reductase) MADE_01874 2004196 - 2004906 + | succinate dehydrogenase catalytic subunit TERM 2078 2004975 - 2004953 - f 89 -12.1 -3.63805 | opp_overlap 2004953 ATGCGATACGCTAAA TAGCCATCC AATAA GGATGGCTA TTTTTTTATATATTC TERM 2079 2004953 - 2004975 + F 100 -12.1 -5.80248 | opp_overlap 2004953 ATGCGATACGCTAAA TAGCCATCC AATAA GGATGGCTA TTTTTTTATATATTC TERM 2080 2005666 - 2005684 + G 71 -7.4 -3.99324 | opp_overlap 2005664, overlap 2005667 CAAAAGATAGAATCT GTTCAGGC CAA GCCTGAAA TTTCTCGTGATGAGA TERM 2081 2005667 - 2005683 + G 75 -10.9 -2.99273 | opp_overlap 2005664, overlap 2005666 AAAAGATAGAATCTG TTCAGGC CAA GCCTGAA ATTTCTCGTGATGAG TERM 2082 2006545 - 2006535 - g 75 -3.2 -5.25735 | CCAAAAAATTAAAAA GCAC CCT GTAC CGCGTGTGCTATATG TERM 2083 2007011 - 2007001 - g 70 -2.4 -4.96646 | TTACACAATCAAAAA GACG CAT CGAC GTATATGCCTCTGCA TERM 2084 2007744 - 2007732 - g 73 -7.7 -4.14874 | opp_overlap 2007732 AGAAGAGCCTCAAAA CCAAG GCG CTTGG TACTGTAGCCAACAC MADE_01875 2005081 - 2007900 + | 2-oxoglutarate decarboxylase MADE_01876 2007910 - 2009421 + | dihydrolipoyltranssuccinate transferase, component of the 2-oxoglutarate dehydrogenase complex TERM 2085 2009528 - 2009541 + F 75 -5.9 -4.70583 | opp_overlap 2009528 AGTCAAACTAATCAA GTCGC ATTT GCGGC TTTTGTCTTACTAAA MADE_01877 2009574 - 2010740 + | succinyl-CoA synthetase subunit beta MADE_01878 2010740 - 2011612 + | Succinyl-CoA synthetase, alpha subunit TERM 2086 2011606 - 2011627 + F 70 -5.9 -4.46212 | TCGCGAAACTACAGG TTGGTAAGC TAAC GCTTAACAA TTTTGTGATAAAAGC TERM 2087 2011657 - 2011641 - f 100 -13.7 -4.37658 | opp_overlap 2011641 2011649 AATTTTGTGATAAAA GCCCGCT TTA AGCGGGC TTTTTTGTGCGCGCT TERM 2088 2011641 - 2011657 + F 100 -13.7 -5.24531 | opp_overlap 2011641, overlap 2011649 AATTTTGTGATAAAA GCCCGCT TTA AGCGGGC TTTTTTGTGCGCGCT TERM 2089 2012150 - 2012119 - g 77 -6.8 -4.4959 | gap 1, overlap 2012120 2012121 2012123 CTCAAGCAATCAAAA TGGATAACACCTCAA TTG TTGAAGCGTTATC-A GCAGAAGATATTGGT TERM 2090 2012149 - 2012121 - g 76 -11.9 -2.56696 | overlap 2012119 2012120 2012123 CAAGCAATCAAAATG GATAACACCTCAA TTG TTGAAGCGTTATC AGCAGAAGATATTGG MADE_01879 2011941 - 2014757 + | TonB-dependent receptor TERM 2091 2015193 - 2015212 + G 80 -7 -4.68539 | overlap 2015198 ATCACACCTTTGGTG CGCCGGGC AAAA GCATGGCG TTTTGTCATTTTCAT MADE_01880 2014886 - 2016406 + | putative tryptophan halogenase TERM 2092 2016465 - 2016496 + F 100 -12.4 -4.60041 | opp_overlap 2016466 2016469 2016473, overlap 2016466 2016469 TAACTAAACAGGTAA AGGATAAAGCAGCC AAAA GGCTGCTTTATTCG TTTTTAAGGATGAAT TERM 2093 2016495 - 2016466 - f 100 -13.7 -3.82811 | opp_overlap 2016466 2016465 2016469, overlap 2016469 2016473 AACTAAACAGGTAAA GGATAAAGCAGCC AAAA GGCTGCTTTATTC GTTTTTAAGGATGAA TERM 2094 2016466 - 2016495 + F 100 -15.9 -3.35542 | opp_overlap 2016466 2016469 2016473, overlap 2016465 2016469 AACTAAACAGGTAAA GGATAAAGCAGCC AAAA GGCTGCTTTATTC GTTTTTAAGGATGAA TERM 2095 2016469 - 2016492 + F 100 -14 -3.81256 | opp_overlap 2016469 2016466 2016473, overlap 2016466 2016465 TAAACAGGTAAAGGA TAAAGCAGCC AAAA GGCTGCTTTA TTCGTTTTTAAGGAT TERM 2096 2016492 - 2016469 - f 93 -14 -2.98471 | opp_overlap 2016466 2016465 2016469, overlap 2016466 2016473 TAAACAGGTAAAGGA TAAAGCAGCC AAAA GGCTGCTTTA TTCGTTTTTAAGGAT TERM 2097 2016488 - 2016473 - f 89 -10.4 -4.14725 | opp_overlap 2016469 2016466 2016465, overlap 2016469 2016466 CAGGTAAAGGATAAA GCAGCC AAAA GGCTGC TTTATTCGTTTTTAA TERM 2098 2017379 - 2017391 + G 71 -6.9 -4.16016 | overlap 2017380 CGCTAGGTGTGTCAT TGGGC TAT GCCCG TTTATTCCAGCCTAG MADE_01881 2016697 - 2019747 + | TonB-dependent receptor TERM 2099 2021340 - 2021312 - g 73 -4.5 -4.78237 | TACCTCAGAAGAAAA CCGCGGTAAATAC TTA GCTTTTACCGAAG ACGGCACTGCACCTG MADE_01882 2019744 - 2024162 + | putative pullulanase TERM 2100 2024191 - 2024208 + F 100 -8.4 -5.83211 | opp_overlap 2024191 GAAAAAATGGTAAAA CCGCGA CATCGT TCGCGG TTTTTTATTTTGGTA TERM 2101 2024208 - 2024191 - f 85 -8.4 -4.33739 | opp_overlap 2024191 GAAAAAATGGTAAAA CCGCGA CATCGT TCGCGG TTTTTTATTTTGGTA MADE_01883 2024338 - 2025201 + | hypothetical protein TERM 2102 2025209 - 2025189 - f 85 -3.9 -5.60864 | opp_overlap 2025189 2025189 TAGACATCAAAAAAA GGTAGCGTT GTA AAAGCAACC TATCTTTATCAATTA TERM 2103 2025277 - 2025259 - f 83 -7.4 -4.76213 | opp_overlap 2025259, overlap 2025254 ACAAATCGAACAAAA GCCCAC GTTTCTA GTGGGC TTTTTTGTTAACGTT TERM 2104 2025259 - 2025277 + F 93 -7.4 -5.4756 | opp_overlap 2025259 2025254 ACAAATCGAACAAAA GCCCAC GTTTCTA GTGGGC TTTTTTGTTAACGTT MADE_01884 2025700 - 2025822 + | hypothetical protein MADE_01885 2025844 - 2026392 + | putative cold-shock RNA methyltransferase MADE_01886 2026486 - 2027382 + | Uvs051 TERM 2105 2027409 - 2027426 + F 100 -9.8 -5.46698 | opp_overlap 2027401 2027403 2027409 TATCTAACAGCAGAA GCCGCC TACACT GGCGGC TTTTTTAGTTTTGAA TERM 2106 2027426 - 2027409 - f 77 -9.8 -3.52787 | opp_overlap 2027409, overlap 2027401 2027403 TATCTAACAGCAGAA GCCGCC TACACT GGCGGC TTTTTTAGTTTTGAA TERM 2107 2028632 - 2028620 - g 87 -6.9 -5.20781 | opp_overlap 2028620 CAGCATAAAACAAAA GGCGC CAG ACGCC TTCCTGTTGGCTGAA MADE_01887 2027565 - 2029457 + | putative glycosidase TERM 2108 2029914 - 2029929 + G 72 -6.2 -4.2679 | CGAGTTAAGGCACTT GATAGT GAAA ACTATC TTTTCGTAACGCTTG MADE_01888 2029653 - 2031587 + | putative alpha-amylase TERM 2109 2032355 - 2032336 - g 82 -7 -4.75776 | opp_overlap 2032347 2032349, overlap 2032338 AACTGAAGGGAAAAA GGCGCCGC TAGG GCAGCGTC TGGCTGAGTTTTTTA TERM 2110 2032410 - 2032420 + G 75 -3.2 -5.16206 | CCATGAGGCAATTAG CTGT AGT GCAG TTTTTCTCTTGGTTT MADE_01889 2031626 - 2033107 + | sugar transporter TERM 2111 2033332 - 2033317 - g 72 -10.4 -2.77088 | overlap 2033316 2033313 ACCATGAGACACAAG GTGGGG AATA CCCCAC TTGGCAACTTCCGCT MADE_01890 2033109 - 2034803 + | cyclomaltodextrin glucanotransferase TERM 2112 2034864 - 2034882 + T 83 -11.8 -3.21099 | opp_overlap 2034863 2034861 2034864 TGCTTTAACGAACAT TCAGGTGA TAC TCACCTGA TTACTGATACAAAAA TERM 2113 2034882 - 2034864 - T 81 -11.8 -2.54098 | opp_overlap 2034864, overlap 2034863 2034861 TGCTTTAACGAACAT TCAGGTGA TAC TCACCTGA TTACTGATACAAAAA TERM 2114 2034899 - 2034922 + T 90 -8.8 -5.10767 | opp_overlap 2034899 TACTGATACAAAAAA GCCCCGATAG ACAT TTTTCGGGGC TTTTTATATTCGCTA TERM 2115 2034922 - 2034899 - T 93 -8.1 -5.38047 | opp_overlap 2034899 TACTGATACAAAAAA GCCCCGATA GACATT TTTCGGGGC TTTTTATATTCGCTA MADE_01891 2036012 - 2034981 - | putative sugar-binding protein TERM 2116 2035550 - 2035587 + g 76 -7.9 -4.3129 | gap 1, opp_overlap 2035550 2035555, overlap 2035546 2035554 GTGCACCCCAGCGAA CAAAG-TGCGTACCTTGA GAT TCAAGCTGTGCAACTTTG TTTTGGTAGTCGGTG TERM 2117 2035972 - 2035991 + g 79 -2.8 -5.33405 | opp_overlap 2035959 ACCCCTGCCAGATGG GCAATGTC AAAA GAGGTTGC TTTTTCTTTCATAAA TERM 2118 2037154 - 2037143 - g 78 -5.8 -4.77567 | ACTGGTAGAAGAAAA CCAC GTAA GTGG TTGGGATGACCCGCG MADE_01892 2036301 - 2037968 + | glutaminyl-tRNA synthetase TERM 2119 2038035 - 2038014 - T 100 -13.1 -5.76949 | opp_overlap 2038014 CATTGTTAAAAAAAA CCGCTTAAG CTAG CTTAAGCGG TTTTTATTTTTATAT TERM 2120 2038014 - 2038035 + T 100 -13.1 -5.71295 | opp_overlap 2038014 CATTGTTAAAAAAAA CCGCTTAAG CTAG CTTAAGCGG TTTTTATTTTTATAT MADE_01893 2038840 - 2038094 - | short chain dehydrogenase TERM 2121 2038879 - 2038927 + H 73 -5.5 -4.65895 | gap 1, overlap 2038880 TTTCATTCGCGAAAG TCGAAGC-TTGTTGCCCTTTAA TAAGTT TTAAAGGTCAGTAACGCTTCGC TTTTTAAGTCCCCAG TERM 2122 2038880 - 2038926 + H 72 -9 -3.39216 | gap 1, overlap 2038879 TTCATTCGCGAAAGT CGAAGC-TTGTTGCCCTTTAA TAAGTT TTAAAGGTCAGTAACGCTTCG CTTTTTAAGTCCCCA TERM 2123 2039024 - 2039006 - H 83 -3.2 -5.58209 | TCAAACGTAAAAAAA GTTAAC ATTAATA GTTAAC AAAACTTTGCAAAGT TERM 2124 2041625 - 2041609 - g 71 -10.1 -3.16421 | opp_overlap 2041608 GTAACAACGACTCAA GGGCCAG GTA CTGACCC AATTAGTGGCTTGGT MADE_01894 2039218 - 2041788 + | hypothetical protein TERM 2125 2041849 - 2041877 + F 100 -16.2 -5.4251 | opp_overlap 2041843 TTAAACAATGTTATA GCCGGTTTAAAG TGTTT CTTTAAACCGGC TTTTTTGTATATAAA TERM 2126 2042288 - 2042312 + G 87 -10.7 -4.11216 | opp_overlap 2042288 CCGATAATTTAGAGA GCATGGCCTAC GGT GTTGGCTATGC TTTTGCGCGTGACAA MADE_01895 2042041 - 2044566 + | penicillin acylase-like protein TERM 2127 2044597 - 2044629 + F 88 -11.4 -3.77087 | opp_overlap 2044597 2044599, overlap 2044599 ATAGCGCAATGAAAA CAGCGACTTTGCCA TTTAT TGGTAAAGTCGCTA TTTACGTGTTGGGTA TERM 2128 2044629 - 2044597 - f 93 -11.4 -4.42639 | opp_overlap 2044597 2044599, overlap 2044599 ATAGCGCAATGAAAA CAGCGACTTTGCCA TTTAT TGGTAAAGTCGCTA TTTACGTGTTGGGTA TERM 2129 2044599 - 2044627 + F 95 -14 -3.4647 | opp_overlap 2044599 2044597, overlap 2044597 AGCGCAATGAAAACA GCGACTTTGCCA TTTAT TGGTAAAGTCGC TATTTACGTGTTGGG TERM 2130 2044627 - 2044599 - f 91 -11.8 -3.81651 | opp_overlap 2044597 2044599, overlap 2044597 AGCGCAATGAAAACA GCGACTTTGCCA TTTAT TGGTAAAGTCGC TATTTACGTGTTGGG MADE_01896 2044685 - 2045707 + | protease (may metabolize cleaved signal peptides) MADE_01897 2045819 - 2046442 + | transcriptional regulator, TetR family protein TERM 2131 2046513 - 2046479 - T 70 -8.8 -3.2916 | GCGAAAAAGCCAAGA TTACACCTACAG TTTGTATCTGC CTGTAGGTGTAA AACCAATACACCCCG MADE_01898 2046856 - 2046542 - | hypothetical protein TERM 2132 2047047 - 2047063 + H 79 -5.1 -5.10077 | AATTTCATAAACGTT CGCTACA TTT TATAGCG TTTTTTAACCTATTT MADE_01899 2047103 - 2047864 + | NIF3 TERM 2133 2048286 - 2048276 - g 71 -6.8 -4.02742 | opp_overlap 2048283 CATAAGAATATGAAA CGTG GCG CACG CCTTAGCCTGAGTTT MADE_01900 2047880 - 2048623 + | SAM-dependent methyltransferase MADE_01901 2049645 - 2048620 - | D-lactate dehydrogenase TERM 2134 2048672 - 2048708 + g 78 -12.3 -2.52742 | overlap 2048671 2048701 GTGGTATTGGCAATT TCTTCTAGGGCTTCTTC GGT GAAGAAGCCCTGGTGGC CTGTTATCAACACAT MADE_01902 2050198 - 2049701 - | probable glutathione peroxidase MADE_01903 2050280 - 2051155 + | putative oxidoreductase MADE_01904 2052852 - 2051251 - | CheY-like receiver protein TERM 2135 2053710 - 2053690 - g 100 -7.5 -5.56673 | overlap 2053692 AGGCAGAAGAAAAAA TGGGCTGGA ATG CCCAGCCGA CCCGGATGATCACCT TERM 2136 2053708 - 2053692 - g 70 -10.1 -2.94342 | overlap 2053690 GCAGAAGAAAAAATG GGCTGGA ATG CCCAGCC GACCCGGATGATCAC MADE_01905 2053053 - 2054246 + | Acyl-CoA dehydrogenase family protein TERM 2137 2054492 - 2054508 + G 85 -12.3 -3.4072 | overlap 2054487 GCAATGGCAAGCGCG CAGCGAC ATT GTCGCTG TTGTCATAGACGCTG TERM 2138 2054832 - 2054845 + G 72 -5.9 -4.49364 | TTTCTTCCCCGTCTG CCCGG TAAA TCGGG TTTATTCTTAGGTTT MADE_01906 2054331 - 2055461 + | Enoyl-CoA hydratase/isomerase family protein TERM 2139 2055453 - 2055469 + F 73 -9.5 -3.14132 | GCACACCCGTTGGCT GCTTTGT AGT ACAAAGC TTACTAAACGCGAGC MADE_01907 2055656 - 2056528 + | rRNA (guanine-N1-)-methyltransferase TERM 2140 2056691 - 2056681 - f 73 -6.8 -4.18494 | opp_overlap 2056679 2056676 2056681 CAGTTTCAGTTAAAA GGCT ATC AGCC TGTTATTGTAACGAA TERM 2141 2056987 - 2056973 - g 73 -11.4 -2.75022 | overlap 2056972 GGCGTGACATACAAG CCGCTG ATG CAGCGG GCCTTAAACAAAGCA MADE_01908 2056891 - 2057106 + | Histidinol-phosphate phosphatase TERM 2142 2057183 - 2057210 + T 100 -16.4 -4.68994 | opp_overlap 2057183 AACATGATATGAAAA GGCTGCAGTAAC TTAT GTTGCTGCAGCC TTTTTGAATGCTAAT TERM 2143 2057210 - 2057183 - T 100 -14.2 -4.38774 | opp_overlap 2057183 AACATGATATGAAAA GGCTGCAGTAAC TTAT GTTGCTGCAGCC TTTTTGAATGCTAAT MADE_01909 2058747 - 2057221 - | Membrane-associated hydrolase of alkaline phosphatase superfamily protein TERM 2144 2057627 - 2057639 + g 72 -6.3 -4.25104 | opp_overlap 2057636, overlap 2057636 TTCTCTACATAACGT GCAAT ATC ATTGC TTTTCATAAACGCAA TERM 2145 2058573 - 2058553 - G 82 -5.5 -5.1848 | overlap 2058572 AACGAAGCCAAAAAA GGTCATA AACCCAA TATGACC AAACCAATTGGCTAG MADE_01910 2058974 - 2058756 - | hypothetical protein TERM 2146 2058968 - 2058985 + g 81 -3.3 -5.43621 | TATAGCGGCTCTGTT GGGGCAT TGCT ACGCCTC TTTTTTATGATTTCT MADE_01911 2059134 - 2060240 + | nucleoid-associated protein NdpA MADE_01912 2060386 - 2061231 + | hypothetical protein MADE_01913 2061273 - 2062190 + | metalloendopeptidase-like membrane protein TERM 2147 2062245 - 2062230 - T 90 -10.4 -4.40184 | opp_overlap 2062230 CGAAGTAAATAGAAA GGCTCC ACAA GGAGCC TTTTTTACTATGCCA TERM 2148 2062230 - 2062245 + T 100 -10.4 -5.21709 | opp_overlap 2062230 CGAAGTAAATAGAAA GGCTCC ACAA GGAGCC TTTTTTACTATGCCA MADE_01914 2064079 - 2062271 - | protease, putative TERM 2149 2062875 - 2062899 + g 82 -12.9 -2.80816 | opp_overlap 2062869, overlap 2062879 AGTAAAAGGTCCAGG CCAAGGGCG ATTACGC CGCCCTTGG TGTAATAGCTAACAA MADE_01915 2064266 - 2064949 + | hypothetical protein MADE_01916 2065046 - 2065483 + | putative PRS2 protein TERM 2150 2065752 - 2065762 + G 85 -6.8 -4.93296 | CCTACATGATGTGCG CCCA ATT TGGG TTTTTATCATCATGC MADE_01917 2065633 - 2066706 + | sensor histidine kinase MADE_01918 2066708 - 2067535 + | putative response regulator in two-component regulatory system TERM 2151 2067546 - 2067531 - T 74 -6.2 -4.41895 | AAGCGGCAATGAAAA TGTAAC GGGC GTTACA AAAACGAAAAGCCCT MADE_01919 2068704 - 2067610 - | 6-phosphofructokinase TERM 2152 2067969 - 2067989 + g 74 -8.3 -3.86194 | AACTAACAGGGCCTT TCAGCGTTC GCT GAGCGTTGA TTTGTGACACGAGTT MADE_01920 2068783 - 2069664 + | hypothetical protein TERM 2153 2069939 - 2069975 + T 71 -6.1 -4.1822 | gap 3, opp_overlap 2069924 2069943 2069946 CGAACGTTCTACGCC CAAAG-CAG-CG-ACAGC GTTA GCTGTCCGACTGACTTTG TTTGTTAGCCTCGAA MADE_01921 2070554 - 2070099 - | possible thioesterase protein MADE_01922 2070806 - 2070582 - | transcriptional regulator, MarR family with acetyltransferase activity MADE_01923 2072154 - 2071051 - | transposase TERM 2154 2071654 - 2071671 + g 73 -7.7 -4.1899 | GCAATGCATGGCATC GGCAGTG ACAA TACTGCC TTTTAACTCCAGTAA MADE_01924 2072420 - 2072274 - | transposase TERM 2155 2072430 - 2072454 + r 70 -2.8 -5.06414 | overlap 2072429 CGACAATGAACGACT GTGGTAACCA TATTT TCGTTTCCAC TTTTTGTTCGAACCA MADE_01925 2073884 - 2072871 - | quinone oxidoreductase MADE_01926 2074908 - 2073901 - | Zinc-containing alcohol dehydrogenase superfamily protein TERM 2156 2074961 - 2074929 - R 70 -9.1 -3.16177 | opp_overlap 2074923 2074932 2074933, overlap 2074924 ACCTCACATACTGAA TATTCAGCGGGTGGT TAA ATCACCCGCTGGTTA ATAGATCTTTTATTA TERM 2157 2074932 - 2074958 + r 100 -15.2 -3.24709 | opp_overlap 2074924 2074929, overlap 2074923 2074933 TCACATACTGAATAT TCAGCGGGTGGT TAA ATCACCCGCTGG TTAATAGATCTTTTA TERM 2158 2074933 - 2074957 + r 100 -16.5 -2.54103 | opp_overlap 2074924 2074929, overlap 2074932 2074923 CACATACTGAATATT CAGCGGGTGGT TAA ATCACCCGCTG GTTAATAGATCTTTT MADE_01927 2075741 - 2074983 - | putative oxidoreductase TERM 2159 2076108 - 2076092 - g 76 -5.2 -4.84359 | CTAGTTGGAGAAAAA TTTGCT TTGAT AGCAAA AGAACGCCTGCGCGC MADE_01928 2075888 - 2076790 + | transcriptional regulator, LysR family protein MADE_01929 2078271 - 2077852 - | hypothetical protein MADE_01930 2079060 - 2078437 - | possible peptidase TERM 2160 2079104 - 2079082 - H 82 -11.4 -3.14931 | opp_overlap 2079080 TTGAGGTTTTATCAA TACCCCATGA CCC TCATGAGGTA GATCAATTAAGTATT TERM 2161 2080277 - 2080252 - g 72 -9 -3.53012 | TTTGGTGGTCCTAAA CGCTGCAACT TCTCCC AGATGCAGCG GGCCTGCGAAGAGTT MADE_01931 2079643 - 2081127 + | probable transposase protein, Y4bF TERM 2162 2081186 - 2081157 - T 100 -15.3 -3.77953 | opp_overlap 2081162 2081166, overlap 2081162 TTAATAAGTTAAGAA GAGAATTAATCAC TTGC GTGATTAATTCTC ATGCACATATATAGT TERM 2163 2081181 - 2081162 - T 73 -8 -3.84992 | opp_overlap 2081162 2081166, overlap 2081157 AAGTTAAGAAGAGAA TTAATCAC TTGC GTGATTAA TTCTCATGCACATAT MADE_01932 2082712 - 2081915 - | putative DNA polymerase related protein TERM 2164 2082768 - 2082743 - R 70 -8.3 -3.38314 | opp_overlap 2082762, overlap 2082741 TTTAAGCGCTAAATA GTTCAAACTGC TTCG GCTGCTTGAAC TGAAGTTCAAAATTA MADE_01933 2083970 - 2082729 - | Radical SAM TERM 2165 2083205 - 2083185 - G 70 -9 -3.30124 | opp_overlap 2083184 GGGTATTGGCGAGAA CGCCGAAT AATAA ACTCGGCG AAGTTTTTGTTGGTT TERM 2166 2083812 - 2083793 - G 70 -5 -4.49556 | gap 1 TTTTTAGTAAAGAAA CACACC-GA CCA TCAGGCGTG AAGCTGTGACATATA MADE_01934 2084107 - 2084232 + | hypothetical protein MADE_01935 2085931 - 2084291 - | Response regulator with TPR repeat TERM 2167 2085651 - 2085663 + g 70 -9.1 -3.31144 | AGCACGATAGGTCGG GCGCT ATC AGCGC TTATAAGGATAAAAA MADE_01936 2086053 - 2086607 + | putative fumarate reductase flavoprotein subunit TERM 2168 2086721 - 2086731 + F 79 -6.8 -4.63928 | GAAGTTTTGTTATAT TGCG CGC CGCA TTTTTGCACTGGTCT MADE_01937 2086798 - 2087769 + | predicted sulfurtransferase MADE_01938 2087822 - 2088070 + | putative signal transduction protein with EFhand domain TERM 2169 2088153 - 2088174 + T 100 -8.1 -5.76633 | gap 1, opp_overlap 2088153 ACCGAAGCAAAAAAA CGAGTGACTT TTT AAG-CACTCG TTTTTTTATGTCTGC TERM 2170 2088174 - 2088153 - T 100 -8.1 -5.64006 | gap 1, opp_overlap 2088153 ACCGAAGCAAAAAAA CGAGTGACTT TTT AAG-CACTCG TTTTTTTATGTCTGC MADE_01939 2089637 - 2088312 - | ATP-dependent RNA helicase, DEAD box family protein MADE_01940 2090500 - 2089847 - | 3-oxoacid CoA-transferase subunit B family enzyme MADE_01941 2091207 - 2090500 - | putative succinyl-CoA transferase, alpha subunit MADE_01942 2091351 - 2092214 + | probable transcriptional regulator MADE_01943 2093037 - 2092285 - | hypothetical protein MADE_01944 2093843 - 2093139 - | Signal transduction histidine kinase MADE_01945 2094053 - 2095027 + | transcriptional regulator for cysteine regulon TERM 2171 2095078 - 2095051 - T 79 -11.4 -2.61094 | opp_overlap 2095051 2095058, overlap 2095058 AAAACAAGCATGAAT GAAAAAAGGGGC TGTT GCCCCTTTTTTG TATTTTAGTCTTTGT TERM 2172 2095051 - 2095078 + T 90 -11.4 -3.86037 | opp_overlap 2095051 2095058, overlap 2095058 AAAACAAGCATGAAT GAAAAAAGGGGC TGTT GCCCCTTTTTTG TATTTTAGTCTTTGT TERM 2173 2095058 - 2095071 + T 100 -9.5 -5.63645 | opp_overlap 2095051 2095058, overlap 2095051 GCATGAATGAAAAAA GGGGC TGTT GCCCC TTTTTTGTATTTTAG TERM 2174 2095071 - 2095058 - T 100 -9.5 -5.30155 | opp_overlap 2095058 2095051, overlap 2095051 GCATGAATGAAAAAA GGGGC TGTT GCCCC TTTTTTGTATTTTAG MADE_01946 2096484 - 2095111 - | L-serine dehydratase 1 MADE_01947 2097289 - 2096717 - | NTP pyrophosphohydrolase, NUDIX family protein MADE_01948 2098768 - 2097338 - | P-aminobenzoate synthetase, component I TERM 2175 2100356 - 2100340 - g 75 -10.1 -3.58343 | GGCATGATTGGTAAA GCAGAGC GCG GCCCTGC TACGGTTGACTCAAT MADE_01949 2099086 - 2100615 + | fumarate hydratase, class I MADE_01950 2100838 - 2100608 - | hypothetical protein TERM 2176 2100672 - 2100704 + g 95 -11.6 -3.9504 | gap 1, opp_overlap 2100679, overlap 2100673 2100679 TCATGCTCTAGTTCA TA-AAAAACAGGTGC GTAT GCACCTGTTTTTGTA TCTTTTATTAACCTT TERM 2177 2100673 - 2100702 + g 88 -12.3 -3.55261 | opp_overlap 2100679, overlap 2100672 2100679 CATGCTCTAGTTCAT AAAAAACAGGTGC GTAT GCACCTGTTTTTG TATCTTTTATTAACC TERM 2178 2100679 - 2100696 + g 100 -11.3 -5.186 | opp_overlap 2100679, overlap 2100673 2100672 CTAGTTCATAAAAAA CAGGTGC GTAT GCACCTG TTTTTGTATCTTTTA TERM 2179 2100696 - 2100679 - G 100 -11.3 -5.26316 | opp_overlap 2100679 2100673 2100672 CTAGTTCATAAAAAA CAGGTGC GTAT GCACCTG TTTTTGTATCTTTTA TERM 2180 2101632 - 2101617 - g 72 -3.2 -5.05601 | opp_overlap 2101630 GATGATACAGAAAAA GCCCAA CACC TTGCGC AACATGTTGCGTCTA MADE_01951 2100840 - 2102129 + | RmuC TERM 2181 2102134 - 2102152 + T 100 -14.6 -4.14056 | opp_overlap 2102134 AAGATGATTAAAAAA GGCCGCTT TAA AAGCGGCC TTTCTAGTTTAACGT TERM 2182 2102152 - 2102134 - T 100 -14.6 -5.2112 | opp_overlap 2102134 AAGATGATTAAAAAA GGCCGCTT TAA AAGCGGCC TTTCTAGTTTAACGT MADE_01952 2106139 - 2102174 - | serine protease, subtilase family protein TERM 2183 2106097 - 2106087 - G 71 -6.8 -4.11484 | overlap 2106094 GCTAACGCGCCAAAA GCAG AAC CTGC TAATGCCGTAGCAAC MADE_01953 2107137 - 2106388 - | ISSod6, transposase TERM 2184 2106442 - 2106421 - G 72 -6.7 -4.22652 | gap 1, opp_overlap 2106421 CCACATCATTGAAAA TGCCAGTGAT ACC AT-ACTGGCA TAGTTTCTCGCTAAC TERM 2185 2107491 - 2107476 - H 76 -4.6 -5.06414 | opp_overlap 2107476 GTTGGCGAATAAAAA GGACGC TCCT GCTTCC TCTCTACTAGCATAG TERM 2186 2107973 - 2107952 - g 74 -7.2 -4.2461 | ATGTTCAGCAATAAA GACGACCC AAATAA GGGACGTC AAATGCCTATCCATT TERM 2187 2108562 - 2108546 - g 70 -2.2 -4.93365 | GCCGACAATCAAAAA CGCG TAGAGAAAG CGCG TCAAGATGTATTGGC MADE_01954 2107556 - 2108743 + | Alpha keto acid dehydrogenase complex, E1 component, alpha subunit MADE_01955 2108743 - 2109720 + | 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit MADE_01956 2109738 - 2111399 + | Apha keto acid dehydrogenase complex, E2 component TERM 2188 2111458 - 2111498 + F 91 -10.1 -4.55689 | gap 1, opp_overlap 2111458 2111461 2111466, overlap 2111466 AGCAAATTGCATTAA CAACAAAAGGGTTGATAC ATAGGC GTATTAACCCTTTT-TTG TTTTGTGTACCTCGT TERM 2189 2111466 - 2111491 + F 100 -8.4 -5.8901 | opp_overlap 2111466 2111461 2111458, overlap 2111458 GCATTAACAACAAAA GGGTTGATAC ATAGGC GTATTAACCC TTTTTTGTTTTGTGT TERM 2190 2111491 - 2111466 - f 84 -6.9 -4.92757 | opp_overlap 2111458 2111466, overlap 2111461 2111458 GCATTAACAACAAAA GGGTTGATACA TAGG CGTATTAACCC TTTTTTGTTTTGTGT MADE_01957 2111568 - 2112446 + | hypothetical protein MADE_01958 2112540 - 2114414 + | Serine/threonine protein kinase MADE_01959 2114407 - 2115273 + | Acyl-CoA thioesterase II MADE_01960 2115421 - 2116842 + | amidophosphoribosyltransferase TERM 2191 2116893 - 2116866 - T 93 -11.4 -4.17556 | opp_overlap 2116871, overlap 2116871 GATATGCCTAATAAA GAAAAGCCGCTT TAAG AAGCGGCTTTTT TACAGGTATTAGTGA TERM 2192 2116888 - 2116871 - T 95 -11.3 -5.09762 | opp_overlap 2116871, overlap 2116866 GCCTAATAAAGAAAA GCCGCTT TAAG AAGCGGC TTTTTTACAGGTATT TERM 2193 2116871 - 2116888 + T 95 -11.3 -5.04987 | opp_overlap 2116866 2116871 GCCTAATAAAGAAAA GCCGCTT TAAG AAGCGGC TTTTTTACAGGTATT MADE_01961 2117501 - 2116902 - | hypothetical protein MADE_01962 2118490 - 2117708 - | tRNA-(MS 2)O6-A-hydroxylase TERM 2194 2117947 - 2117934 - G 76 -8.1 -4.08767 | opp_overlap 2117935, overlap 2117935 GCTAGCTTGGCAAAA CGCTC GCAT GAGCG CGCTTCGATATAGGC TERM 2195 2117975 - 2117986 + g 76 -4.4 -4.99861 | GGCACCACAAATGAG CTTG TCGA CAAG TTTTTCTGGTTCGTA TERM 2196 2118883 - 2118859 - g 79 -7.7 -4.40804 | overlap 2118861 CATTATTTCATAAAA GTCGCAGGCGC TTT GCGCCTGTAGC GCTGGATATCTATTT MADE_01963 2118657 - 2119262 + | hypothetical protein TERM 2197 2119966 - 2119989 + G 70 -9.6 -3.06796 | opp_overlap 2119954, overlap 2119956 2119954 AAACACGGGTTATAG CCGTGTGCTT CCTA AAGCAGACGG TTCAATGCCATCGCA TERM 2198 2120602 - 2120592 - g 74 -8.2 -3.92625 | TAGACGCGAAGCAAA GCGG TGA CCGC CCTGATTACTGGGCA MADE_01964 2119439 - 2121034 + | serine carboxypeptidase TERM 2199 2121111 - 2121140 + T 77 -6.3 -4.65838 | opp_overlap 2121110, overlap 2121113 AGGCTCAGAAATGAG CTAGCTGCGCTAA ACAT TCAGCGCAGCGCG TTTTTAACATGTCTC MADE_01965 2122008 - 2121100 - | transcriptional regulator, LysR family protein MADE_01966 2122031 - 2123122 + | oxidoreductase, zinc-binding protein TERM 2200 2123151 - 2123171 + F 95 -14.1 -3.18118 | opp_overlap 2123154, overlap 2123154 ACTATTGGCACTCAC TAAGCCCTC TCA GAGGGCTTA TATCTTATCGCGTCA TERM 2201 2123168 - 2123154 - f 82 -11.4 -3.18383 | opp_overlap 2123154 2123151 ATTGGCACTCACTAA GCCCTC TCA GAGGGC TTATATCTTATCGCG TERM 2202 2123154 - 2123168 + F 88 -11.4 -3.72788 | opp_overlap 2123154, overlap 2123151 ATTGGCACTCACTAA GCCCTC TCA GAGGGC TTATATCTTATCGCG TERM 2203 2123193 - 2123225 + F 78 -7.6 -4.42743 | opp_overlap 2123193 ATCGCGTCACTAAAA GCGGTTTAGGCGGC ATCGC GCTCCCTTGACCGC TTTGTCTTATTTGTA MADE_01967 2123402 - 2125471 + | Catalase MADE_01968 2125983 - 2125468 - | hypothetical protein TERM 2204 2125503 - 2125522 + g 100 -10 -5.63517 | opp_overlap 2125503 TTTTTAATGATAGAA GGACGCTT TTTG AGGCGTCC TTTTTTGTTTGCCCA TERM 2205 2125591 - 2125571 - G 70 -4.7 -4.42806 | overlap 2125580 TCAGGTTGAAAGAAA CCTGAATCA CCC TGACTGAGG GGAAGATAATCCGAA MADE_01969 2127391 - 2126402 - | alcohol dehydrogenase, zinc-containing TERM 2206 2127824 - 2127812 - g 88 -7.7 -5.08824 | GGGTGACGCAAAAAA TGCTG ACA CAGCA ACTTAGAGAGTTAGA MADE_01970 2127565 - 2127987 + | transcriptional regulator TERM 2207 2128020 - 2128055 + T 75 -10.4 -3.18511 | opp_overlap 2128020 CACATAAATAAAAAA GGCGAGCATTGAAAAG AGAC CCTCCCAATGCTCGCC TTCAATGTATATGTG TERM 2208 2128055 - 2128020 - T 100 -17 -5.76237 | opp_overlap 2128020 CACATAAATAAAAAA GGCGAGCATTGAAAAG AGAC CCTCCCAATGCTCGCC TTCAATGTATATGTG MADE_01971 2129586 - 2128090 - | sucrose phosphorylase TERM 2209 2128552 - 2128570 + g 82 -8 -4.62069 | opp_overlap 2128540 AAGGTCAACGTTGTT GGCTGCCG CGC CGGTTGCC TTTTTAGACTCGCCA MADE_01972 2130081 - 2129896 - | hypothetical protein TERM 2210 2130029 - 2130051 + g 76 -4.1 -5.03945 | gap 1 CAGCAAGCGCCGCCA CCGCAACAGT CATC AC-GTAGCGG TTTTTCTGGTTCTTC TERM 2211 2130161 - 2130143 - R 100 -13.2 -5.1356 | opp_overlap 2130143 GCGTACCAACAAAAA GCCCTGTT TAG AACAGGGC TGTATACTGATAGTC TERM 2212 2130143 - 2130161 + r 91 -13.2 -2.96692 | opp_overlap 2130143 GCGTACCAACAAAAA GCCCTGTT TAG AACAGGGC TGTATACTGATAGTC MADE_01973 2131959 - 2130190 - | band 7 protein MADE_01974 2132593 - 2131979 - | hypothetical protein MADE_01975 2133551 - 2132826 - | UDP-2,3-diacylglucosamine hydrolase TERM 2213 2133573 - 2133601 + r 78 -7.4 -4.31688 | opp_overlap 2133555 2133577, overlap 2133577 TCTTAACGTAGTTTA AAAAGCCGCGTT AAAAA AACGCGGCTTGC TTTTAGCTTAATATT TERM 2214 2133597 - 2133577 - R 100 -12.6 -4.63184 | opp_overlap 2133577 2133573, overlap 2133555 AACGTAGTTTAAAAA GCCGCGTT AAAAA AACGCGGC TTGCTTTTAGCTTAA TERM 2215 2133577 - 2133597 + r 90 -12.6 -3.71792 | opp_overlap 2133555 2133577, overlap 2133573 AACGTAGTTTAAAAA GCCGCGTT AAAAA AACGCGGC TTGCTTTTAGCTTAA MADE_01976 2134171 - 2133680 - | peptidyl-prolyl cis-trans isomerase B TERM 2216 2135193 - 2135207 + G 73 -4.3 -4.8048 | opp_overlap 2135183 AAAGAGCACGATTCA GAAAC CTTGC GTTTC TTTTTGATGTCGGCG MADE_01977 2134335 - 2135717 + | cysteinyl-tRNA synthetase TERM 2217 2135745 - 2135768 + T 100 -13.2 -4.87893 | opp_overlap 2135744 2135745 2135749 2135750, overlap 2135750 ACTTTTTAACAGAAT GAAAGCCCGC ATTT GCGGGTTTTC TTTTTAGTTAAGCTT TERM 2218 2135768 - 2135745 - T 77 -11 -2.79452 | opp_overlap 2135745 2135750, overlap 2135744 2135749 2135750 ACTTTTTAACAGAAT GAAAGCCCGC ATTT GCGGGTTTTC TTTTTAGTTAAGCTT TERM 2219 2135763 - 2135750 - T 72 -9.5 -3.04209 | opp_overlap 2135750 2135745, overlap 2135749 2135745 2135744 TTAACAGAATGAAAG CCCGC ATTT GCGGG TTTTCTTTTTAGTTA TERM 2220 2135750 - 2135763 + T 100 -9.5 -5.34655 | opp_overlap 2135749 2135745 2135744 2135750, overlap 2135745 TTAACAGAATGAAAG CCCGC ATTT GCGGG TTTTCTTTTTAGTTA MADE_01978 2136456 - 2136031 - | halomucin MADE_01979 2137614 - 2136577 - | hypothetical protein TERM 2221 2137173 - 2137162 - G 77 -3.6 -5.2696 | GTAAAACGCAAAAAA GCGA AAGA CCGC GGTTTGATTTAAGTC TERM 2222 2137542 - 2137506 - G 91 -11 -4.21812 | GCGCATCGAAAATAA GCCATGTTAGGTTCAC AAAAA GTATACCTAACATGAC TAAGTCTAAAATTAA MADE_01980 2139307 - 2137643 - | putative membrane-bound lytic murein transglycosylase TERM 2223 2139182 - 2139197 + g 72 -9 -3.59516 | opp_overlap 2139182 GTGAATTTCACTACA CGCTTC TAAT GAAGCG TTCTCGTTACTTTCT MADE_01981 2140163 - 2139372 - | Hydroxyacylglutathione hydrolase TERM 2224 2139742 - 2139727 - G 81 -8.2 -4.42062 | GAGCCTTCAAATAAA CGACCG CATC CGGCCG AAAACAGTGTATCGC MADE_01982 2140212 - 2141105 + | SAM-dependent methyltransferase TERM 2225 2141275 - 2141247 - T 95 -8.9 -5.46706 | opp_overlap 2141248 2141249 2141270 2141270, overlap 2141229 2141248 2141249 ACTTTAAAAGAAAAA TTGGAGATAGCTT AGA AAGCTATCTCCCT TTTGGGGGGTTAATC TERM 2226 2141274 - 2141248 - T 93 -12.4 -3.86397 | opp_overlap 2141248 2141249 2141270 2141270, overlap 2141229 2141247 2141249 CTTTAAAAGAAAAAT TGGAGATAGCTT AGA AAGCTATCTCCC TTTTGGGGGGTTAAT TERM 2227 2141248 - 2141274 + T 93 -12.4 -4.11751 | opp_overlap 2141229 2141248 2141247 2141249, overlap 2141249 2141270 2141270 CTTTAAAAGAAAAAT TGGAGATAGCTT AGA AAGCTATCTCCC TTTTGGGGGGTTAAT TERM 2228 2141249 - 2141273 + T 100 -15.9 -3.06569 | opp_overlap 2141229 2141248 2141247 2141249, overlap 2141248 2141270 2141270 TTTAAAAGAAAAATT GGAGATAGCTT AGA AAGCTATCTCC CTTTTGGGGGGTTAA TERM 2229 2141273 - 2141249 - T 100 -15.9 -2.90754 | opp_overlap 2141249 2141248 2141270 2141270, overlap 2141229 2141248 2141247 TTTAAAAGAAAAATT GGAGATAGCTT AGA AAGCTATCTCC CTTTTGGGGGGTTAA MADE_01983 2142124 - 2141285 - | MscS Mechanosensitive ion channel ei VT8 TERM 2230 2142441 - 2142405 - R 78 -3 -5.4505 | gap 1 CCGCTCAATAAAAAA GGTGACATCCTTTCGCT TTAT AACGTT-GAATGTCACC TTGCTTTAATGCGAA MADE_01984 2144566 - 2142470 - | methionyl-tRNA synthetase TERM 2231 2143008 - 2143028 + g 79 -9.7 -3.6682 | GCTTCTGCTTTTTCT GCCAGTACT GGC AGTACAGGC TTTAAGTAAATAACC TERM 2232 2143516 - 2143541 + g 72 -9.1 -3.54424 | TTGACATTTTCGCAC CGTTTACGGTT ACGA AACCGTGAATG TTTACGCCAGTGGGC TERM 2233 2144543 - 2144556 + g 77 -3.7 -5.16572 | opp_overlap 2144544, overlap 2144544 ATGGCTGCAAATACT AGCGG AAAA CCGCG TTTTTTGCATTACGT TERM 2234 2145107 - 2145079 - g 71 -7.4 -3.98114 | gap 1, opp_overlap 2145079 AAGCGAAGATAATAA GCACATGCAGCCG CTAT CGGC-ACATGGGC TGTTGGCTAACTCGA MADE_01985 2144606 - 2145712 + | ATP-binding protein, Mrp/Nbp35 family MADE_01986 2145902 - 2145738 - | hypothetical protein MADE_01987 2145870 - 2146463 + | deoxycytidine triphosphate deaminase TERM 2235 2147520 - 2147547 + G 78 -4.8 -5.03715 | opp_overlap 2147508, overlap 2147522 2147524 AATTAGCGATAGCAC TATTGCCGTAGC GGGC GTTGCGGCTATG TTTTTTACCAATAGT MADE_01988 2146633 - 2148069 + | Na+/dicarboxylate symporter MADE_01989 2149822 - 2148497 - | Chromosome segregation ATPase MADE_01990 2151018 - 2150005 - | hypothetical protein MADE_01991 2151139 - 2151288 + | hypothetical protein MADE_01992 2151388 - 2152218 + | short chain dehydrogenase MADE_01993 2152400 - 2153542 + | predicted aminoglycoside phosphotransferase TERM 2236 2153692 - 2153671 - g 80 -5.9 -4.93318 | GAGAACTTAGAAAAA CTGAAAGAA GAAT TACTTTCAG TTAACCCAAACATTG MADE_01994 2153599 - 2153991 + | short chain dehydrogenase MADE_01995 2154138 - 2154662 + | Carbonic anhydrases/acetyltransferase, isoleucine patch superfamily protein TERM 2237 2154723 - 2154700 - f 93 -8.8 -5.26316 | overlap 2154701 GTACCCCATAAAAAA TGCCCAGAAC AAAC GTTCCGGGCC TAGGGGAATGGCTCA TERM 2238 2154722 - 2154701 - f 90 -12.3 -3.75067 | overlap 2154700 TACCCCATAAAAAAT GCCCAGAAC AAAC GTTCCGGGC CTAGGGGAATGGCTC TERM 2239 2155051 - 2155068 + F 83 -6.3 -5.10208 | overlap 2155047 ATGTTATTTATCTTG GGAACAG GTGG TTGTTCC TTTTTATTAACATTG TERM 2240 2155573 - 2155563 - g 71 -6.8 -4.11371 | opp_overlap 2155568, overlap 2155568 GAAGATGCGTTAAAA GCAG ACC CTGC TATCAAGGTACTTGC MADE_01996 2155251 - 2156285 + | putative Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase TERM 2241 2156313 - 2156364 + T 87 -12.3 -3.37344 | overlap 2156314 CAGGCTTTTGTCTCG TAAGCTTAAGCGTCGGTGTTCAC CCGCTT GTGAACACCGACGCTAGGGCCAG TTGGTTGCCTAAGGG TERM 2242 2156314 - 2156363 + T 91 -13.6 -2.62192 | overlap 2156313 AGGCTTTTGTCTCGT AAGCTTAAGCGTCGGTGTTCAC CCGCTT GTGAACACCGACGCTAGGGCCA GTTGGTTGCCTAAGG TERM 2243 2156366 - 2156386 + T 82 -8.3 -4.30978 | overlap 2156368 GACGCTAGGGCCAGT TGGTTGCCT AAG GGGCAACTA TTTTCATCGCTTCCC TERM 2244 2156368 - 2156384 + T 73 -8.7 -3.75571 | overlap 2156366 CGCTAGGGCCAGTTG GTTGCCT AAG GGGCAAC TATTTTCATCGCTTC MADE_01997 2156720 - 2156589 - | hypothetical protein TERM 2245 2156669 - 2156685 + g 89 -10.9 -4.12532 | TAGCATCAGCGTTCT TGGCGTT ATC AACGCCA TTTGTCTGTGCGCAC MADE_01998 2156749 - 2157321 + | putative periplasmic immunogenic protein MADE_01999 2157334 - 2157789 + | GAF domain-containing protein MADE_02000 2157792 - 2158082 + | hypothetical protein MADE_02001 2158099 - 2158767 + | putative solute/DNA competence effector MADE_02002 2158770 - 2160812 + | carboxyl-terminal protease Prc TERM 2246 2160847 - 2160827 - f 100 -12.5 -4.37157 | opp_overlap 2160827 AATGATTAGAAGAAA GGGCTGGTC TAG GGCCAGCCC TTTTTTTGTGTCTAT TERM 2247 2160827 - 2160847 + F 100 -14.7 -5.77988 | opp_overlap 2160827 AATGATTAGAAGAAA GGGCTGGTC TAG GGCCAGCCC TTTTTTTGTGTCTAT TERM 2248 2162060 - 2162039 - g 74 -10.9 -2.81464 | opp_overlap 2162038 2162039, overlap 2162044 TTACCACCGAGTACA GCCAACCCT TACT AGGGTTAGC GCTTTGCATATTTGC MADE_02003 2160934 - 2162229 + | sodium-dependent symporter family protein MADE_02004 2162301 - 2163776 + | putative Na+/H+ antiporter NnaC TERM 2249 2163843 - 2163866 + G 82 -8 -4.65895 | opp_overlap 2163842 2163841, overlap 2163840 2163844 AGTTCAAGCTAAACG CCGGGCGGAT TATC AGCCGCCCGC TTTTTCAATAGCGAC TERM 2250 2163844 - 2163865 + G 79 -11.5 -3.39216 | opp_overlap 2163842 2163841, overlap 2163840 2163843 GTTCAAGCTAAACGC CGGGCGGAT TATC AGCCGCCCG CTTTTTCAATAGCGA MADE_02005 2163823 - 2166432 + | aminopeptidase N, a cysteinylglycinase TERM 2251 2166467 - 2166491 + G 90 -10.8 -4.22678 | opp_overlap 2166467 2166466 TACTTTTCAATAAAT GCACCTTACA AGCAA TGTGAGGTGC TTTATGTTCCATCTA MADE_02006 2166419 - 2166661 + | hypothetical protein TERM 2252 2166652 - 2166664 + F 83 -4.8 -5.24129 | opp_overlap 2166652 AAAATCCTTTGAAAG GCTC GCATA GAGC TTTTTTGTACGCGAA TERM 2253 2167427 - 2167443 + G 78 -12.3 -2.62396 | opp_overlap 2167427 ACGACTTTGAGCAAA TGGACGG CGA CCGTCCA TACTCTAACCCAATA TERM 2254 2167443 - 2167427 - g 93 -12.3 -3.73953 | opp_overlap 2167427 ACGACTTTGAGCAAA TGGACGG CGA CCGTCCA TACTCTAACCCAATA MADE_02007 2166994 - 2168361 + | hypothetical protein TERM 2255 2168919 - 2168903 - g 76 -4.4 -5.00616 | TGGGTTGCTAAAAAA CTCGAT TAATG ACCGAG AACGTTTGTTGTCTC TERM 2256 2170640 - 2170628 - g 71 -3.4 -4.76892 | overlap 2170630 ACAGCAAGTTAAAAA TACG GTTAT CGTA CCGGTTGGCGCAAAA TERM 2257 2171443 - 2171433 - g 83 -4 -5.28683 | ATTAAGAGCAAAAAA GAAT CGC ATTC TGAAGTAGGCGATCG TERM 2258 2172474 - 2172462 - g 71 -7.7 -4.00476 | GAAAGTGAGTACAAA CAGCT TGA AGCTG CCACCCAACAATATA MADE_02008 2168415 - 2172950 + | NAD-specific glutamate dehydrogenase TERM 2259 2172975 - 2172991 + F 100 -10.1 -5.75342 | opp_overlap 2172975 ACCTTAAAGATATAA GCCCTGT TTA GCAGGGC TTTTTTTTAGCGAGC TERM 2260 2172991 - 2172975 - f 79 -9.4 -3.76634 | opp_overlap 2172975 ACCTTAAAGATATAA GCCCTG TTTAG CAGGGC TTTTTTTTAGCGAGC MADE_02009 2173032 - 2174027 + | dihydroorotate dehydrogenase MADE_02010 2174099 - 2176198 + | putative RNA methylase TERM 2261 2176397 - 2176378 - g 70 -5 -4.53419 | GATGATAATAATAAA GAAATTGG TTGG CCATTTTC CGCCGCCGATTTAGA MADE_02011 2176297 - 2176428 + | thiol-disulfide isomerase and thioredoxin i MADE_02012 2176425 - 2178365 + | ABC transporter, ATP-binding protein MADE_02013 2180292 - 2178856 - | deoxyribodipyrimidine photolyase, putative TERM 2262 2179537 - 2179517 - G 75 -9.7 -3.60151 | overlap 2179520 GGGCTCAAACGAGAA CAAGCACGC CTT GCGTACTCG GGCTTAGAAATGTGT TERM 2263 2179534 - 2179520 - G 71 -7.8 -3.93216 | overlap 2179517 CTCAAACGAGAACAA GCACGC CTT GCGTAC TCGGGCTTAGAAATG TERM 2264 2181790 - 2181772 - g 71 -7.4 -3.95435 | overlap 2181767 TCGCGTAAAAGACAA CCCTGCAT TGA ATGCAGCG TGTGACATGGGAAAA TERM 2265 2182069 - 2182051 - g 84 -7.4 -4.78764 | CAAAGCCATTAAAAA GTCACTTC TAG GTAGTGAC TACGAGGCGCATAGC MADE_02016 2181716 - 2183140 + | DNA photolyase TERM 2266 2183523 - 2183536 + G 74 -3.8 -4.96848 | TACCCGTTACTATTT GCGA AGATAA TCGC TTTTTCTCTACCCCC MADE_02017 2183144 - 2184682 + | deoxyribodipyrimidine photolyase-related protein MADE_02018 2184861 - 2186168 + | predicted membrane protein MADE_02019 2186613 - 2186485 - | hypothetical protein TERM 2267 2186573 - 2186552 - G 86 -10.9 -3.75153 | overlap 2186538 CTGCTGTAAGCGAAA CGTTCACGC ACAA GCGTAAACG CCAACGCAGCAGCCA TERM 2268 2186761 - 2186735 - R 76 -2.3 -5.42605 | opp_overlap 2186736 2186739 2186740, overlap 2186740 CTAATAAAAAGAAAA TTAAAGCACTA TTAAT TAGTGCGTTAT TAGATGTAGATATTT TERM 2269 2186756 - 2186740 - R 76 -6.6 -4.4352 | opp_overlap 2186740 2186739 2186736, overlap 2186735 AAAAAGAAAATTAAA GCACTA TTAAT TAGTGC GTTATTAGATGTAGA TERM 2270 2187175 - 2187152 - R 70 -8.3 -3.31365 | opp_overlap 2187155, overlap 2187155 TACGATATTATAATA TAAGCCATT GATTAA AATGGCTTA ATATTACAAAAATTA MADE_02020 2190247 - 2187188 - | transposase TERM 2271 2189563 - 2189549 - G 72 -2.8 -5.07567 | TGATAGTTCAAAAAA GTGCTC GCC AAACAC CTGTAGTATTGCCGC MADE_02021 2190447 - 2190626 + | zinc metalloproteinase Mpr protein MADE_02022 2190692 - 2191246 + | zinc metalloproteinase Mpr protein TERM 2272 2191311 - 2191298 - gT 91 -2.3 -5.86965 | ACGCATTAAAAAAAA TGGCG ACAT CGCAA TACTCAACACTCTCT MADE_02023 2191219 - 2191335 + | hypothetical protein TERM 2273 2191484 - 2191462 - T 100 -11.4 -5.51046 | opp_overlap 2191465 TAAATAGACAAAAAA TAAGCAACAG GCT CTGTCGCTTA TAAACTAAGTAAACA MADE_02024 2191936 - 2191520 - | Cd(II)/Pb(II)-responsive transcriptional regulator TERM 2274 2192244 - 2192261 + G 80 -5.5 -5.0538 | TTACACAAAGCGAAT GCGGCTA GAAT TAGCGGC TTTTTTCAGATGGCA MADE_02025 2192019 - 2192636 + | Cation efflux protein MADE_02026 2193167 - 2193027 - | hypothetical protein TERM 2275 2193131 - 2193121 - Gf 83 -3.2 -5.60993 | TTGGGCATAAAAAAA GCTA GCT CAGC GTATCTGAAATTGAT MADE_02027 2193166 - 2194407 + | putative RND efflux system protein MADE_02028 2194404 - 2195357 + | putative RND efflux system protein, MFP subunit TERM 2276 2195674 - 2195705 + G 72 -8.8 -3.53012 | gap 1, opp_overlap 2195676 ATACCCGCTCGATAT CACG-CTATGGCTTG TCG CAAGTCACAGTCGTG TTTAAAGAGGGCACC TERM 2277 2196465 - 2196455 - g 85 -6.8 -5.02502 | opp_overlap 2196458 CACAGTACAGAAAAA CCTC GTC GAGG GCGCTTTACTTGTCA MADE_02029 2195418 - 2198552 + | putative RND efflux system protein TERM 2278 2198589 - 2198569 - f 75 -9.7 -3.37622 | opp_overlap 2198569 AATAGTTATGGAGAA GGTCGATTC CTA GTATCGACC TTTGAAATACAAACG TERM 2279 2198569 - 2198589 + F 77 -9.7 -3.59979 | opp_overlap 2198569 AATAGTTATGGAGAA GGTCGATTC CTA GTATCGACC TTTGAAATACAAACG MADE_02030 2198855 - 2199670 + | Co/Zn/Cd efflux system component MADE_02031 2199693 - 2200070 + | hypothetical protein MADE_02032 2200302 - 2201504 + | outer membrane protein, probably efflux family MADE_02033 2201509 - 2202816 + | Secretion protein HlyD MADE_02034 2202832 - 2206041 + | Heavy metal efflux pump CzcA MADE_02035 2206559 - 2208676 + | outer membrane iron(III) dicitrate receptor TERM 2280 2208699 - 2208731 + F 93 -12.9 -3.35327 | opp_overlap 2208698 2208697 2208701, overlap 2208705 2208729 TTTTAGACAGAAATG CACTAATTCCGCA TTATTGT TGCGGGATTAGTG TTATGCACCTTTGGT TERM 2281 2208925 - 2208941 + F 77 -10.9 -2.75535 | overlap 2208917 TCTCTCAGATTTACG CTCTAGC CAA GCTAGAG TGCTTAAACTATTGA MADE_02036 2209012 - 2209134 + | putative RND efflux system protein TERM 2282 2209249 - 2209275 + T 79 -10.2 -3.49048 | overlap 2209248 TTGTGTACTGAGCTG GGGCATTCGA TATGAGT TCGAGTGCCC TCTTATTAATTGCGC MADE_02037 2210246 - 2209533 - | hypothetical protein TERM 2283 2209616 - 2209605 - G 76 -4.4 -4.9725 | opp_overlap 2209605 ATTTTCATATAAAAA GGAT TTGA ATCC CTTTAAATTATTACC TERM 2284 2209691 - 2209707 + g 78 -5.2 -5.00616 | opp_overlap 2209685 CATCGACAATCCCTT CACTTT GAATG AAAGTG TTTTTTCCACACCAA MADE_02038 2211610 - 2210246 - | beta-lactamase domain protein MADE_02039 2212453 - 2211704 - | putative DNA-binding protein TERM 2285 2212518 - 2212477 - H 73 -7.4 -4.11394 | overlap 2212478 2212513 ATCCTATCTTTAAAA TCCTCCTATGTCTAATAC GGTTTA GTATTAGACATAGGGTGC AAGAGTAAGTATAGT TERM 2286 2212517 - 2212478 - H 78 -10.9 -3.06515 | overlap 2212477 2212513 TCCTATCTTTAAAAT CCTCCTATGTCTAATAC GGTTTA GTATTAGACATAGGGTG CAAGAGTAAGTATAG MADE_02040 2212565 - 2213803 + | site-specific recombinase, phage integrase family protein MADE_02041 2213935 - 2214285 + | Hg(II)-responsive transcriptional regulator MADE_02042 2214703 - 2214578 - | hypothetical protein TERM 2287 2214643 - 2214631 - G 72 -4.8 -4.65895 | overlap 2214640 CGGCCGATTGAAAAA TGCC AACCA GGCA GTGTCTGCGCAATTC MADE_02043 2214828 - 2215085 + | Mercury scavenger protein:Heavy-metal-associated domain MADE_02044 2215089 - 2216528 + | mercuric reductase MerA TERM 2288 2216558 - 2216571 + F 77 -5.3 -4.85599 | TTCACGAATTAACGC TACTC GACG GAGTA TTTTTATAAAGTCAG TERM 2289 2217142 - 2217086 - f 84 -12.8 -3.05816 | gap 2, opp_overlap 2217111, overlap 2217111 GCATTTTTCAGGCAA CGCTACGTGAAATCTAT-AGGC-ATA ATAAGGG TATTGCCTTATAGATTTCACACAGCG CACGCTTTTATCTGA TERM 2290 2217272 - 2217241 - f 100 -16.8 -2.73721 | opp_overlap 2217247, overlap 2217231 2217228 2217247 ACTAAGCGGGAATTA CCACAAGACTGTAT GTAA ATACAGCCTTGTGG TAAAGTGGCACCTAA TERM 2291 2217440 - 2217482 + F 75 -9.5 -3.41569 | gap 1, opp_overlap 2217433, overlap 2217438 TACAAGTATTACCTT GTTACTTCACGCATGATAAT TACA GTTATCATGCATGAA-TAAC TATTTAAATCAATAC MADE_02045 2217474 - 2218748 + | Site-specific recombinase XerD-like protein MADE_02046 2218968 - 2219318 + | hypothetical protein TERM 2292 2219317 - 2219305 - T 90 -4.9 -5.60993 | CGTGTGACAAAAAAA TAAAG TCG CTTTA GTAACCCCACGTATT MADE_02047 2219695 - 2219342 - | Diacylglycerol kinase TERM 2293 2219496 - 2219457 - G 73 -10.9 -2.62184 | opp_overlap 2219462 2219464 TCGGTTGTTATATGA TCGCAGAGCTTTTCAAT CGCGGT ATTGAGAAGCTCTGTGA TCAAGACAATAAACA TERM 2294 2219462 - 2219491 + g 72 -10.2 -2.78463 | opp_overlap 2219457, overlap 2219464 TGTTATATGATCGCA GAGCTTTTCAAT CGCGGT ATTGAGAAGCTC TGTGATCAAGACAAT MADE_02048 2219973 - 2219764 - | Universal stress protein UspA and related nucleotide-binding protein TERM 2295 2220798 - 2220780 - g 72 -5.4 -4.41494 | TACCTTCAACCAAAA TATAAAGT CTC ACCTTATA GAACCAGTGACTATC MADE_02049 2220381 - 2220854 + | cytochrome c family protein TERM 2296 2220908 - 2220862 - T 80 -4.4 -5.27779 | opp_overlap 2220862 TGGAATAGCAAAAAA GCACGTACACGCCTGGTC TTAGAGAAATT GGCCAGGAGTGTAAATGC CTTTTCATGAAATCA TERM 2297 2220950 - 2220963 + T 77 -5.3 -4.92828 | overlap 2220951 GCTAGTAGCGCTTTA CGAAA CGTC TTTCG TTTCTTTTTCAATTT TERM 2298 2220951 - 2220967 + T 81 -6.6 -4.81249 | overlap 2220950 CTAGTAGCGCTTTAC GAAACG TCTTT CGTTTC TTTTTCAATTTCAGC MADE_02050 2222578 - 2220947 - | glutamate synthase TERM 2299 2222505 - 2222495 - G 75 -3.2 -5.17744 | AGAGAGTAACAAAAA CCAC CAA ATGG GAGTCCAAAGCAAAC TERM 2300 2223403 - 2223393 - g 81 -8.2 -4.54727 | opp_overlap 2223392 2223395, overlap 2223395 GTGGTGAAAGCAAAA CCCG TCA CGGG CGTTTAGCTATTGGC TERM 2301 2224401 - 2224413 + G 71 -6.9 -4.07568 | CCGTAGAAATGCTGT CGTGC GAT GCGCG TTTTCAAAAAGAGCA MADE_02051 2222978 - 2224615 + | putative glutathione-regulated potassium-efflux system protein TERM 2302 2224795 - 2224785 - g 74 -6.8 -4.20516 | CGGTCACGCAACAAA GCTC ATA GAGC GCATGCTGTTTTTGG MADE_02052 2224615 - 2225082 + | bacterioferritin subunit 1 TERM 2303 2225138 - 2225105 - T 79 -8.3 -4.04355 | gap 1, opp_overlap 2225107 2225109 2225112, overlap 2225098 2225109 2225112 AAAAAACATAGTAAA GTA-ATAACGGCTGCA TCG CGCAGCCGTTATCTAT TGTGCTGCCATACTT TERM 2304 2225107 - 2225135 + T 86 -11.8 -3.27951 | opp_overlap 2225105 2225098 2225109 2225112, overlap 2225109 2225112 AAAACATAGTAAAGT AATAACGGCTGC ATCGC GCAGCCGTTATC TATTGTGCTGCCATA TERM 2305 2225133 - 2225109 - T 100 -15.1 -3.61075 | opp_overlap 2225107 2225109 2225112, overlap 2225105 2225098 2225112 AACATAGTAAAGTAA TAACGGCTGCA TCG CGCAGCCGTTA TCTATTGTGCTGCCA TERM 2306 2225109 - 2225133 + T 95 -14.4 -3.20322 | opp_overlap 2225109 2225105 2225098 2225112, overlap 2225107 2225112 AACATAGTAAAGTAA TAACGGCTGC ATCGC GCAGCCGTTA TCTATTGTGCTGCCA TERM 2307 2225112 - 2225130 + T 89 -11.7 -3.73859 | opp_overlap 2225109 2225105 2225098 2225112, overlap 2225109 2225107 ATAGTAAAGTAATAA CGGCTGC ATCGC GCAGCCG TTATCTATTGTGCTG TERM 2308 2225130 - 2225112 - T 93 -12.4 -3.92143 | opp_overlap 2225112 2225109 2225107, overlap 2225109 2225105 2225098 ATAGTAAAGTAATAA CGGCTGCA TCG CGCAGCCG TTATCTATTGTGCTG MADE_02053 2225553 - 2225152 - | hypothetical protein TERM 2309 2226049 - 2226059 + G 73 -4 -4.74103 | GCGTCCGTTGCACAC TAAC GCC GTTA TTTTTGCCTTCGGCG MADE_02054 2225861 - 2227294 + | Cytochrome c oxidase, cbb3-type, subunit I MADE_02055 2227310 - 2227915 + | cytochrome c oxidase, monoheme subunit, membrane-bound MADE_02056 2227917 - 2228078 + | cytochrome c oxidase, subunit CcoQ MADE_02057 2228101 - 2228577 + | cytochrome c oxidase, cbb3-type, subunit III MADE_02058 2228734 - 2229075 + | Cytochrome c oxidase, cbb3-type, subunit III TERM 2310 2229104 - 2229121 + F 100 -9.1 -5.60993 | opp_overlap 2229104 TAAATATCTCAAAAA GCCTCGT TACT ACGGGGC TTTTTTTATGAGAAA TERM 2311 2229121 - 2229104 - f 81 -6.9 -4.6856 | opp_overlap 2229104 TAAATATCTCAAAAA GCCTCGT TACT ACGGGGC TTTTTTTATGAGAAA MADE_02059 2229413 - 2229823 + | hypothetical protein TERM 2312 2230368 - 2230352 - g 79 -2.3 -5.56673 | overlap 2230345 2230354 2230355 AGCGAGAACAAAAAA CATTTTT AAA AAAACTG GGGCTTGCCGGCATC MADE_02060 2229823 - 2232213 + | copper-translocating P-type ATPase TERM 2313 2232258 - 2232275 + G 72 -2.7 -5.07652 | TCGCCATCATTATTG TGGCAGT CGCT ATTGTCA TTTTCTTTTGGGCGG MADE_02061 2232215 - 2232445 + | cytochrome oxidase maturation protein, cbb3-type MADE_02062 2232432 - 2233091 + | integral membrane protein MADE_02063 2233209 - 2233877 + | transcriptional regulator of aerobic, anaerobic respiration, osmotic balance (CAMP-binding family) protein TERM 2314 2233917 - 2233933 + F 88 -10.8 -4.00038 | opp_overlap 2233917 GTTATCTTCCTAAAA GCGCGC ATTCA GCGCGC TTTATACTCCTACTC TERM 2315 2233933 - 2233917 - f 88 -10.8 -4.08767 | opp_overlap 2233917 GTTATCTTCCTAAAA GCGCGC ATTCA GCGCGC TTTATACTCCTACTC MADE_02064 2234128 - 2235051 + | putative universal stress protein MADE_02065 2235166 - 2236119 + | ATPase of the PP-loop superfamily protein MADE_02066 2236120 - 2237145 + | Alpha-beta superfamily hydrolase MADE_02067 2237796 - 2237149 - | hypothetical protein MADE_02068 2238026 - 2237802 - | Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase MADE_02069 2238483 - 2238031 - | uncharacterized FlgJ-related protein MADE_02070 2239207 - 2238488 - | stress-induced protein UspE MADE_02071 2239916 - 2239290 - | Lysine exporter protein (LYSE/YGGA) TERM 2316 2239563 - 2239591 + g 78 -6.7 -4.62475 | overlap 2239566 2239586 GAGAAAGCCCATCCA CACCGCACGTTTC ACT GAAATTTGCGATG TTTTGCTTTCTGAGT MADE_02072 2240660 - 2239929 - | NAD-dependent deacetylase MADE_02073 2241587 - 2240757 - | rhodanese-related sulfurtransferase TERM 2317 2241082 - 2241067 - G 87 -10.4 -4.11394 | opp_overlap 2241074, overlap 2241068 ATTTCACCTTTAAAA CGCGCA CTAC TGCGCG CATCCACAAGCTGCG TERM 2318 2241625 - 2241604 - R 79 -10.2 -3.53444 | opp_overlap 2241604 TTATTTCTCCTGAAA GGCACTCA GTTAAT TGAGTGCC TTATCACAACTGCCG TERM 2319 2241604 - 2241625 + r 80 -10.9 -3.30124 | opp_overlap 2241604 TTATTTCTCCTGAAA GGCACTCAG TTAA TTGAGTGCC TTATCACAACTGCCG MADE_02074 2242160 - 2241660 - | Peroxiredoxin MADE_02075 2242927 - 2242235 - | hypothetical cytosolic protein TERM 2320 2242800 - 2242783 - G 81 -3.3 -5.32396 | opp_overlap 2242797 ACATTAAAAACAAAA CCGCCAC GTCT GTGCCAG CTTCAGGTTTAAATT TERM 2321 2243073 - 2243061 - R 72 -3.5 -5.08824 | opp_overlap 2243061 GCCGGAGTTAAAAAA TAAAT CCA ATTTA TTGATTTAGTTTGTA MADE_02076 2244000 - 2243212 - | hypothetical protein TERM 2322 2243333 - 2243345 + g 70 -9.1 -3.32765 | AGACAGTCTTTCTTT GCGCA TGT TGCGC TTACTATATCGGGTT TERM 2323 2244952 - 2244921 - R 79 -9.6 -3.68341 | opp_overlap 2244921 2244923, overlap 2244928 2244945 AATTGCATGGAACAA TACTAAACCTGTAT ATCT AAACAGGCTTAGTA TATTAAGCATCATCC MADE_02077 2247925 - 2244986 - | hypothetical protein MADE_02078 2248311 - 2247925 - | hypothetical protein MADE_02079 2248490 - 2248308 - | hypothetical protein TERM 2324 2248846 - 2248828 - g 76 -4.5 -5.08169 | overlap 2248833 AGAGATCTTAAAAAA GGCAACG GTCTT CTTTGCC AAAGAAACCAAGTAA MADE_02080 2248568 - 2248861 + | transposase, IS911 MADE_02081 2248909 - 2249736 + | Integrase MADE_02082 2250074 - 2249862 - | phage transcriptional regulator, AlpA TERM 2325 2250207 - 2250185 - R 93 -7.7 -5.52384 | opp_overlap 2250187, overlap 2250187 TGTTCAGCAAAAAAA TAGGGGGAA TCGCG TTCCCCCTT ATTTCTTGGGTACAT TERM 2326 2250187 - 2250205 + r 90 -11 -4.22554 | opp_overlap 2250187 2250185 TTCAGCAAAAAAATA GGGGGAAT CGC GTTCCCCC TTATTTCTTGGGTAC TERM 2327 2250205 - 2250187 - R 90 -10.3 -4.40552 | opp_overlap 2250187, overlap 2250185 TTCAGCAAAAAAATA GGGGGAA TCGCG TTCCCCC TTATTTCTTGGGTAC MADE_02083 2250982 - 2250230 - | hypothetical protein MADE_02084 2251513 - 2251049 - | hypothetical protein MADE_02085 2252794 - 2251556 - | prophage CP4-like integrase TERM 2328 2253053 - 2253073 + r 73 -10.5 -2.90714 | overlap 2253056 GCACGCTGTTACCAG CGAGGGATT TTA AATCCCTTG TGTCTACCAATTTCA TERM 2329 2253056 - 2253070 + r 72 -8.6 -3.5947 | overlap 2253053 CGCTGTTACCAGCGA GGGATT TTA AATCCC TTGTGTCTACCAATT MADE_02086 2254885 - 2253251 - | excinuclease ABC subunit C TERM 2330 2255936 - 2255916 - g 73 -7.7 -4.18018 | TGCCGCTATGGAAAA GTACTTTGA ACT TCAAAATAC GTTGGCGGAAATAGC MADE_02087 2254930 - 2256627 + | Periplasmic parvulin-like peptidyl-prolyl isomerase TERM 2331 2256681 - 2256706 + T 100 -9.8 -5.27923 | opp_overlap 2256681 CCAAGAAACGTTAAA GGCCAGTATT GTTTAA GATACTGGCC TTTTTTATGGGCTTG TERM 2332 2256706 - 2256681 - T 76 -9.1 -3.76534 | opp_overlap 2256681 CCAAGAAACGTTAAA GGCCAGTAT TGTTTAAG ATACTGGCC TTTTTTATGGGCTTG MADE_02088 2256987 - 2256820 - | succinyl-diaminopimelate desuccinylase MADE_02089 2257233 - 2258405 + | succinyl-diaminopimelate desuccinylase TERM 2333 2258469 - 2258496 + T 81 -5.5 -5.16151 | opp_overlap 2258473, overlap 2258471 2258473 CATCAATAAAGCGTA AAAAGGAGCGG AATTAA CCGCTCCTATC TTTTTATTCACTTTA TERM 2334 2258471 - 2258494 + T 77 -8.1 -4.18817 | opp_overlap 2258473, overlap 2258469 2258473 TCAATAAAGCGTAAA AAGGAGCGG AATTAA CCGCTCCTA TCTTTTTATTCACTT TERM 2335 2258492 - 2258473 - T 93 -10.7 -4.7339 | opp_overlap 2258473 2258471 2258469 AATAAAGCGTAAAAA GGAGCGG AATTAA CCGCTCC TATCTTTTTATTCAC TERM 2336 2258473 - 2258492 + T 83 -10.7 -3.6707 | opp_overlap 2258473, overlap 2258471 2258469 AATAAAGCGTAAAAA GGAGCGG AATTAA CCGCTCC TATCTTTTTATTCAC MADE_02090 2260286 - 2258535 - | acyltransferase family protein TERM 2337 2259373 - 2259395 + g 75 -6.3 -4.43832 | overlap 2259375 2259391 GTACCTAGGTGCTCA CATTCACGT ATTGC ACGTGAAAG TTCTTTTCTATCTTC TERM 2338 2259689 - 2259677 - G 83 -9.1 -4.23674 | opp_overlap 2259675 TGGCATCAATATAAA CCGGT AAA ACCGG CGCTTTGGCTTGCCT MADE_02091 2261220 - 2260423 - | metallophosphoesterase MADE_02092 2261516 - 2261316 - | regulatory protein, LysR:LysR, substrate-binding TERM 2339 2262245 - 2262261 + G 76 -4.4 -5.00138 | gap 1, overlap 2262248 GACATAGCTTAGCGT CGTCGCT TGAA AGCG-CG TTTTTGGTTTGCGTA MADE_02093 2261659 - 2262324 + | P3 protein MADE_02094 2264020 - 2262668 - | aminotransferase TERM 2340 2263287 - 2263307 + g 100 -11.1 -5.36364 | opp_overlap 2263286 2263285 2263281 CTGTTCAAATGAATC GCCCTCGGT AAA ACAGAGGGC TTTTTATATTTTTCC TERM 2341 2266369 - 2266396 + H 74 -4.2 -5.15634 | opp_overlap 2266369 2266366 2266370 2266373, overlap 2266371 TAGGTATTAAAAGAA TCGAGGAAATAA TTTT TTATTTCCTCTC TTTTTTGCTCGACTG TERM 2342 2266371 - 2266394 + H 93 -11.2 -4.20707 | opp_overlap 2266370 2266369 2266366 2266373, overlap 2266369 GGTATTAAAAGAATC GAGGAAATAA TTTT TTATTTCCTC TCTTTTTTGCTCGAC TERM 2343 2266790 - 2266804 + G 90 -7.1 -5.32699 | opp_overlap 2266790, overlap 2266783 AATCCATAAAAAAAA CCGCA ACATG TGCGG TTTTTTCGTATTTGG TERM 2344 2266804 - 2266790 - g 100 -7.1 -5.97575 | opp_overlap 2266783 2266790 AATCCATAAAAAAAA CCGCA ACATG TGCGG TTTTTTCGTATTTGG MADE_02097 2266771 - 2266923 + | hypothetical protein TERM 2345 2266957 - 2266985 + T 72 -10.4 -2.60496 | opp_overlap 2266963, overlap 2266963 TTTATTTGACCCATA AAAAAACCCGCA ACATG TGCGGGTTTTTC GTATTTGGCGGAGAG TERM 2346 2266979 - 2266963 - T 100 -9.4 -5.64274 | opp_overlap 2266957 2266963 TGACCCATAAAAAAA CCCGCA ACATG TGCGGG TTTTTCGTATTTGGC TERM 2347 2266963 - 2266979 + T 93 -9.4 -4.93696 | opp_overlap 2266963, overlap 2266957 TGACCCATAAAAAAA CCCGCA ACATG TGCGGG TTTTTCGTATTTGGC TERM 2348 2267237 - 2267265 + T 72 -10.4 -2.60496 | opp_overlap 2267243, overlap 2267243 TTTATTGAGCACATA AAAAAACCCGCA ACATG TGCGGGTTTTTC GTATTTGGCGGAGAG TERM 2349 2267259 - 2267243 - T 100 -9.4 -5.74122 | opp_overlap 2267243 2267237 GAGCACATAAAAAAA CCCGCA ACATG TGCGGG TTTTTCGTATTTGGC TERM 2350 2267243 - 2267259 + T 93 -9.4 -4.93696 | opp_overlap 2267243, overlap 2267237 GAGCACATAAAAAAA CCCGCA ACATG TGCGGG TTTTTCGTATTTGGC TERM 2351 2267411 - 2267439 + T 72 -10.4 -2.60496 | opp_overlap 2267393 2267417, overlap 2267417 TTTATTTGACCCATA AAAAAACCCGCA ACATG TGCGGGTTTTTC ATATTTGGCGGAGAG TERM 2352 2267433 - 2267417 - T 100 -9.4 -5.64274 | opp_overlap 2267411 2267417, overlap 2267393 TGACCCATAAAAAAA CCCGCA ACATG TGCGGG TTTTTCATATTTGGC TERM 2353 2267417 - 2267433 + T 93 -9.4 -4.93696 | opp_overlap 2267393 2267417, overlap 2267411 TGACCCATAAAAAAA CCCGCA ACATG TGCGGG TTTTTCATATTTGGC MADE_02098 2268540 - 2267680 - | LigB family enzyme TERM 2354 2268062 - 2268074 + g 76 -4.7 -4.86731 | opp_overlap 2268062, overlap 2268063 AAAGAAATGTGAAAT TGCGC ATC GCGCC TTTTGTTTGAGCCAG MADE_02099 2269007 - 2268552 - | putative membrane DoxD-like family protein MADE_02100 2268982 - 2269125 + | hypothetical protein MADE_02101 2269200 - 2270105 + | probable transcriptional regulator, LysR family protein TERM 2355 2270129 - 2270106 - T 83 -11.7 -3.12351 | TTTTGGGATAGGTAA GCGCGGCGT ATATCA ACGCCACGC TCCACAGATTTTTAA MADE_02102 2271620 - 2270154 - | xanthine/uracil/vitamin C permease TERM 2356 2271733 - 2271752 + r 71 -4.9 -4.49756 | opp_overlap 2271734, overlap 2271734 AAGAGGCATAAAAAA ACCCGCA ACAATG TGCGGGC TTTTCGTATTTGGCG TERM 2357 2271751 - 2271734 - R 100 -8.4 -5.65177 | opp_overlap 2271733 2271734 AGAGGCATAAAAAAA CCCGCA ACAATG TGCGGG CTTTTCGTATTTGGC TERM 2358 2271734 - 2271751 + r 70 -8.4 -3.2913 | opp_overlap 2271734, overlap 2271733 AGAGGCATAAAAAAA CCCGCA ACAATG TGCGGG CTTTTCGTATTTGGC MADE_02103 2271996 - 2271871 - | hypothetical protein TERM 2359 2272422 - 2272435 + G 73 -2.3 -5.16237 | CTCCCTTTGAGCAAG CTGGC TTAG GCGAG TTTTTTACTGCCCTT MADE_02104 2272109 - 2272480 + | sulfur relay protein TusB/DsrE MADE_02105 2272480 - 2272848 + | DsrE family protein TERM 2360 2272964 - 2272982 + G 72 -3 -5.0133 | overlap 2272954 TGATGGTGTTTACGC CCCAGCGT TAA ACACTGCG TTTTTTGAACAACTC MADE_02106 2272848 - 2273192 + | hypothetical protein TERM 2361 2273494 - 2273477 - g 75 -2.6 -5.1101 | opp_overlap 2273492, overlap 2273492 CGATTATTTAAAAAA GGCCCG GCTAAG CAAGCC ACAAAATTGGCTGGA MADE_02107 2273189 - 2273536 + | sulfite reductase, gamma subunit-related protein TERM 2362 2273562 - 2273583 + F 93 -5.8 -5.63517 | opp_overlap 2273538 2273562 GCATTATATTTAAAG CGCTAGCG CCCCTC TGCTGGCG TTTTTTCTTTCGCAC MADE_02108 2273917 - 2274327 + | hypothetical protein TERM 2363 2274351 - 2274381 + T 75 -5.5 -4.73635 | gap 1, opp_overlap 2274356, overlap 2274356 TTGGTACACCTATGA TTACAGGCGGCGGT CGTT AATGCCGCCT-TAA TTTTATTCGCTTGTC TERM 2364 2274356 - 2274377 + T 73 -7.9 -3.82864 | opp_overlap 2274356, overlap 2274351 ACACCTATGATTACA GGCGGCGGT CGTT AATGCCGCC TTAATTTTATTCGCT MADE_02109 2275150 - 2274404 - | hypothetical protein TERM 2365 2275217 - 2275244 + r 73 -9.9 -3.24422 | opp_overlap 2275218, overlap 2275215 2275214 2275218 GGAAGTAAAAGAAAA AGAGCCATCAC ATAAAA GTGATGGCTCA TAGTTTTTAGCAGTA TERM 2366 2275243 - 2275218 - R 100 -13.4 -5.54338 | opp_overlap 2275218 2275217 2275215 2275214 GAAGTAAAAGAAAAA GAGCCATCAC ATAAAA GTGATGGCTC ATAGTTTTTAGCAGT TERM 2367 2275218 - 2275243 + r 90 -13.4 -2.54171 | opp_overlap 2275218, overlap 2275217 2275215 2275214 GAAGTAAAAGAAAAA GAGCCATCAC ATAAAA GTGATGGCTC ATAGTTTTTAGCAGT MADE_02110 2277735 - 2275261 - | TonB-dependent receptor TERM 2368 2278034 - 2278050 + r 74 -3.8 -5.06414 | TTTTTAAGGCGCGTA TGAAAT TTGAT ATTTCA TTTTTGTTACGCGGC TERM 2369 2278117 - 2278104 - R 71 -5.3 -4.48902 | opp_overlap 2278104 AGATATGTAAAGAAA TGTCA GTAG TGACA TTAGTGCATGAAAAA TERM 2370 2278173 - 2278154 - R 72 -3.6 -5.01732 | overlap 2278142 AATTTTGCTAAAAAA CAAACCGT ATTT ACAATTTG AAACAACTTTCCTTA TERM 2371 2278342 - 2278314 - R 73 -9.6 -3.09878 | opp_overlap 2278314 2278312, overlap 2278317 GTTAGGGAGGTAAGA TGACCGACACCT TTCTT AGGTGCCGGTAA TACGTTTGATATCAT TERM 2372 2278339 - 2278317 - R 80 -11.3 -2.76171 | opp_overlap 2278314 2278312, overlap 2278314 AGGGAGGTAAGATGA CCGACACCT TTCTT AGGTGCCGG TAATACGTTTGATAT MADE_02111 2279718 - 2278426 - | seryl-tRNA synthetase TERM 2373 2279661 - 2279678 + g 81 -8.5 -4.42974 | GGTTAAAACCACGGG CAGCTAA TCGC TTAGCTG TTTGTTCTATATCGC MADE_02112 2280112 - 2279729 - | camphor resistance protein CrcB MADE_02113 2280622 - 2280215 - | ATPase, AAA family protein TERM 2374 2280267 - 2280277 + g 73 -4.6 -4.91109 | AGAAATTCTCGTTTG GCCT TAA GGGC TTTTTCTAATCCGCG MADE_02114 2281578 - 2280607 - | Alanine dehydrogenase A TERM 2375 2281104 - 2281125 + g 84 -7.9 -4.88736 | opp_overlap 2281085 2281101 2281104 GTACGCCACCAAGTA GCGTACCGC TTCC GCCGTGCGC TTTTTCTAAGTAATG TERM 2376 2281532 - 2281546 + g 76 -4.2 -4.91573 | overlap 2281533 GCTGGCGTTAGGCCA ACACGA TAT TCGTGG TTTTTAATCTCTTTT MADE_02115 2281816 - 2282250 + | leucine-responsive regulatory protein TERM 2377 2282684 - 2282703 + G 74 -5.7 -4.65819 | overlap 2282682 GTGCAACCGGGGCGT GGGTAGC CGACTT GCTACTC TTTTCATTTGGTTTT TERM 2378 2283262 - 2283246 - g 73 -4.3 -4.86731 | overlap 2283261 GCCGGTCAAAGAAAA CGCCCCG GTG CGAAACG AGCCAACGTTCGGCA TERM 2379 2284110 - 2284095 - g 79 -3.2 -5.27335 | opp_overlap 2284095 2284109 GCTGCCAAACAAAAA GCGG GAAATGGT CCGC TTAAGTGAAGTCATA TERM 2380 2284716 - 2284702 - g 76 -8.5 -4.05033 | opp_overlap 2284696 CGTATTGCACAGAAA GCCCG AGCGG CGGGC ATTCACCTTATTTTA MADE_02116 2282512 - 2285007 + | cell division protein FtsK MADE_02117 2285728 - 2285030 - | orotidine 5-phosphate decarboxylase MADE_02118 2286904 - 2285735 - | tetratricopeptide repeat family protein TERM 2381 2285854 - 2285864 + g 72 -5.4 -4.48072 | GGTACTTAGGGCGCT GCAA CAT TTGC TTTTCTACTAACTCT TERM 2382 2286108 - 2286126 + g 70 -2.4 -5.02074 | gap 1 TGAAAGCTATCCCAG TCGTCGG TTTCTT CCG-CGA TTTTTTCGAGACTCG MADE_02119 2287053 - 2286904 - | hypothetical protein MADE_02120 2287056 - 2288570 + | 30S ribosomal subunit protein S1 MADE_02121 2288733 - 2288557 - | phosphoserine aminotransferase TERM 2383 2288794 - 2288813 + r 100 -13.6 -4.07885 | opp_overlap 2288794 2288797, overlap 2288797 GGTCTATTAGGTAAA CAAGCGGC AAAA GCCGCTTG TTTTAAAGAACACTG TERM 2384 2288813 - 2288794 - R 95 -13.6 -3.68351 | opp_overlap 2288794 2288797, overlap 2288797 GGTCTATTAGGTAAA CAAGCGGC AAAA GCCGCTTG TTTTAAAGAACACTG TERM 2385 2288797 - 2288810 + r 89 -9.5 -4.17048 | opp_overlap 2288797 2288794, overlap 2288794 CTATTAGGTAAACAA GCGGC AAAA GCCGC TTGTTTTAAAGAACA TERM 2386 2288810 - 2288797 - R 86 -9.5 -3.97674 | opp_overlap 2288794 2288797, overlap 2288794 CTATTAGGTAAACAA GCGGC AAAA GCCGC TTGTTTTAAAGAACA MADE_02122 2290500 - 2288863 - | DNA gyrase, A subunit MADE_02123 2291564 - 2290731 - | DNA gyrase subunit A TERM 2387 2291770 - 2291746 - H 73 -2.1 -5.20534 | overlap 2291751 ATTAATCAACAAAAA GACAAGCGA TTATTTT TCGCTCACC CAGGCCTATAAAAAG MADE_02124 2291867 - 2292571 + | 3-demethylubiquinone-9 3-methyltransferase TERM 2388 2292741 - 2292726 - f 80 -6.2 -4.6902 | opp_overlap 2292719 2292732 GTAGAACGCTAAAAA GTTAGT TGTT ACTAAC ATAAATTTCATGCCA TERM 2389 2292867 - 2292854 - f 73 -8.1 -3.92522 | TCCCAACCGTAGAAA TCGGG ATCG CCCGA TCGCACAAAAAAGCA TERM 2390 2292965 - 2292955 - f 70 -3.2 -4.85195 | AAAAGAATTTAAAAA GCAG TCT CTAC TTTATACTTTTTAAG TERM 2391 2293085 - 2293068 - f 74 -4.9 -4.74084 | gap 1 AAATTAAAACGAAAA TGGGC-AT TAC ATAGCCCA CGCATCAAGCGCTAA MADE_02125 2293120 - 2295441 + | ribonucleotide-diphosphate reductase alpha subunit TERM 2392 2295680 - 2295701 + G 79 -3.1 -5.44721 | opp_overlap 2295680 2295693 TGCCATTTTCGAAAA GCTTATT GAGAAACA AATAAGC TTTTTTTGGCGTCCT MADE_02126 2295615 - 2296694 + | ribonucleotide-diphosphate reductase beta subunit TERM 2393 2296725 - 2296758 + G 77 -11.1 -3.15249 | gap 1, opp_overlap 2296725 2296727 AGCAGTGACGAAAAA TC-CGTCCGCATCGAT GTT GTCGATGTGGGCGCGA TTCATACCCCCTCTG TERM 2394 2296758 - 2296725 - g 78 -6 -4.75372 | gap 1, opp_overlap 2296725, overlap 2296727 AGCAGTGACGAAAAA TC-CGTCCGCATCGA TGTTG TCGATGTGGGCGCGA TTCATACCCCCTCTG MADE_02127 2296707 - 2296979 + | iron-sulfur cluster-binding protein MADE_02128 2297252 - 2297010 - | hypothetical protein MADE_02129 2297528 - 2297842 + | hypothetical protein MADE_02130 2298120 - 2299217 + | NADH-dependent flavin oxidoreductase, Oye family protein TERM 2395 2299240 - 2299271 + T 82 -10.9 -3.53761 | opp_overlap 2299241, overlap 2299241 GGCATATCGTGATCA ATTCACTAGCGCG TTAGGT CGCGCTAGTGAGC TTTCAGAAAAGCTTC TERM 2396 2299241 - 2299270 + T 93 -14.4 -2.72043 | opp_overlap 2299241, overlap 2299240 GCATATCGTGATCAA TTCACTAGCGCG TTAGGT CGCGCTAGTGAG CTTTCAGAAAAGCTT TERM 2397 2299270 - 2299241 - T 83 -12.2 -3.16191 | opp_overlap 2299240 2299241 GCATATCGTGATCAA TTCACTAGCGCG TTAGGT CGCGCTAGTGAG CTTTCAGAAAAGCTT MADE_02131 2301647 - 2299263 - | GGDEF domain-containing PAS signal transduction protein TERM 2398 2301785 - 2301801 + r 76 -2.2 -5.4477 | overlap 2301786 GCTTTATTACGGCGT GTCGCT ATCAC AGCGAA TTTTTTTACACCTTT MADE_02132 2302425 - 2301841 - | permease of the drug/metabolite transporter superfamily protein MADE_02133 2302532 - 2302750 + | phosphoribosylaminoimidazole-succinocarboxamide synthase TERM 2399 2302886 - 2302851 - T 95 -13.6 -3.53091 | gap 1, opp_overlap 2302859, overlap 2302852 2302859 AGTGTCGCGCTTAAA CGA-AAAAAGAGGACGT ATT ACGTCCTCTTTTTATCA ATAACGCTTTGTTCA TERM 2400 2302885 - 2302852 - T 95 -14.9 -2.71712 | gap 1, opp_overlap 2302859, overlap 2302851 2302859 GTGTCGCGCTTAAAC GA-AAAAAGAGGACGT ATT ACGTCCTCTTTTTATC AATAACGCTTTGTTC TERM 2401 2302877 - 2302859 - T 100 -13.2 -5.37593 | opp_overlap 2302859, overlap 2302852 2302851 GCTTAAACGAAAAAA GAGGACGT ATT ACGTCCTC TTTTTATCAATAACG TERM 2402 2302859 - 2302877 + T 100 -13.2 -4.87665 | opp_overlap 2302859 2302852 2302851 GCTTAAACGAAAAAA GAGGACGT ATT ACGTCCTC TTTTTATCAATAACG MADE_02134 2303619 - 2302906 - | phosphoribosylaminoimidazole-succinocarboxamide synthase MADE_02135 2304735 - 2303632 - | lipoprotein-34 NlpB MADE_02136 2305326 - 2304748 - | dihydrodipicolinate synthase MADE_02137 2305631 - 2305329 - | dihydrodipicolinate synthase TERM 2403 2306098 - 2306121 + G 70 -8.8 -3.34013 | opp_overlap 2306102, overlap 2306099 CTTTTTAATGTCGAA TTCAGTGGCG AAGA CGCCGCTGGG TTGATTAAAGCGGTA MADE_02138 2305810 - 2306373 + | glycine cleavage system transcriptional repressor MADE_02139 2306351 - 2306815 + | bacterioferritin comigratory protein TERM 2404 2306852 - 2306888 + T 100 -12.4 -4.21827 | opp_overlap 2306852 2306857, overlap 2306857 TGAATCGTTAAATAT CAAAAGCCCCGAAAAG GTAAA CTTTCCGGGGCTTTTC TTTTAGGGTCTTTGA TERM 2405 2306888 - 2306852 - T 95 -14.6 -2.62667 | opp_overlap 2306852 2306857, overlap 2306857 TGAATCGTTAAATAT CAAAAGCCCCGAAAAG GTAAA CTTTCCGGGGCTTTTC TTTTAGGGTCTTTGA TERM 2406 2306883 - 2306857 - T 100 -14.5 -4.49756 | opp_overlap 2306852 2306857, overlap 2306852 CGTTAAATATCAAAA GCCCCGAAAAG GTAAA CTTTCCGGGGC TTTTCTTTTAGGGTC TERM 2407 2306857 - 2306883 + T 100 -12.3 -5.09259 | opp_overlap 2306857 2306852, overlap 2306852 CGTTAAATATCAAAA GCCCCGAAAAG GTAAA CTTTCCGGGGC TTTTCTTTTAGGGTC MADE_02140 2308043 - 2306970 - | putative permease TERM 2408 2307992 - 2307980 - G 79 -9.1 -4.15654 | GAAGAATAAGAATAA GCAGC ATT GCTGC ATCAGGATCGGAAAA TERM 2409 2309039 - 2309049 + G 73 -2.4 -5.24531 | GGTTTTGATCCCAAC GCCG CAG CGTC TTTTTTCTCAACCAT TERM 2410 2309214 - 2309229 + G 71 -7.5 -3.89354 | TTGAGCTTGCTAAGG CGCGC ATAAAA GCGCG TTATTCCTTTGAGCC MADE_02141 2308373 - 2309836 + | peptidase M48, Ste24p MADE_02142 2310358 - 2309852 - | Thioredoxin related protein TERM 2411 2310584 - 2310571 - H 76 -4.5 -5.05505 | ATTAGAAACCAAAAA CGCAA TAGT TCGCG CCAATTGAAAAAACT MADE_02143 2310617 - 2310970 + | putative arsenate reductase ArsC MADE_02144 2310970 - 2311572 + | Flavodoxin/nitric oxide synthase TERM 2412 2312074 - 2312060 - g 74 -3.4 -5.03961 | overlap 2312055 2312061 AATGAAAGAAGAAAA GGCCCG TTT CGAGCA AAATCAGCAGTAAAA MADE_02145 2311665 - 2312087 + | hypothetical protein TERM 2413 2312137 - 2312125 - T 100 -4.9 -5.85737 | ATACCAAGAAAAAAA CTTTT ATT AAAAG GTGACAAGGGCACGT MADE_02146 2312980 - 2312243 - | Chromosomal replication initiator, DnaA like protein to DnaA protein Hda MADE_02147 2314384 - 2312987 - | hypothetical protein TERM 2414 2314641 - 2314611 - H 90 -9.8 -4.47485 | opp_overlap 2314613, overlap 2314613 AAAAAGCGCATAAAA TAGCCGTCACAAAT TGG ACTTGTGACGACTT GCTGGTAGAATCCGC TERM 2415 2314639 - 2314613 - H 93 -12.4 -3.82551 | opp_overlap 2314613, overlap 2314611 AAAGCGCATAAAATA GCCGTCACAAAT TGG ACTTGTGACGAC TTGCTGGTAGAATCC MADE_02148 2314689 - 2315729 + | phosphoribosylaminoimidazole synthetase MADE_02149 2315726 - 2316376 + | phosphoribosylglycinamide formyltransferase TERM 2416 2316977 - 2316963 - g 76 -4.2 -5.0538 | opp_overlap 2316963 CGGGACTCGAAAAAA CGAGAA ACC TTCGCG TGGTTTGCCCCTTCA MADE_02150 2316363 - 2317079 + | hypothetical protein TERM 2417 2317112 - 2317128 + F 100 -10.1 -5.65177 | opp_overlap 2317112 AAATTCCTCAAAAAA GCACGCT AAT GGCGTGC TTTTTTTATCGCTAT TERM 2418 2317128 - 2317112 - f 93 -9.4 -5.03747 | opp_overlap 2317112 AAATTCCTCAAAAAA GCACGC TAATG GCGTGC TTTTTTTATCGCTAT MADE_02151 2317319 - 2317432 + | hypothetical protein TERM 2419 2318257 - 2318276 + G 72 -8.6 -3.73224 | opp_overlap 2318257 2318256, overlap 2318258 GGAATGGTGAAGAAG TGTTAGGC ATGC GCCTAACG TTTAATAAGCGCTAC TERM 2420 2318852 - 2318830 - g 72 -2.7 -5.09225 | gap 1 ACCTTACCGAAAAAA TGCGTCAGGT CATT AAC-GACGCA ATGGACGTTCACGGC TERM 2421 2319039 - 2319025 - g 77 -7.2 -4.46514 | ATGTACTTAAAGAAA TTGAAG CTG CTTCAA TTGAAGATAAAAAAG MADE_02152 2317452 - 2319914 + | acyl-CoA dehydrogenase TERM 2422 2319934 - 2319949 + T 100 -11.8 -4.8622 | opp_overlap 2319934 ACGTTGAAACGTAAA GGCCGC GCTC GCGGCC TTTTTCATTACACAC TERM 2423 2319949 - 2319934 - T 91 -11.8 -3.84719 | opp_overlap 2319934 ACGTTGAAACGTAAA GGCCGC GCTC GCGGCC TTTTTCATTACACAC MADE_02153 2320048 - 2319911 - | hypothetical protein MADE_02154 2320084 - 2320599 + | hypothetical protein TERM 2424 2320613 - 2320580 - T 77 -8.4 -3.89524 | gap 1, opp_overlap 2320588, overlap 2320581 2320588 AGGTTATTTTACAAA CGA-AAAAACCGGAT GAATA ATCCGGTTTTTATCA AACAAAACGCGTTTA TERM 2425 2320612 - 2320581 - T 72 -9.7 -2.93393 | gap 1, opp_overlap 2320588, overlap 2320580 2320588 GGTTATTTTACAAAC GA-AAAAACCGGAT GAATA ATCCGGTTTTTATC AAACAAAACGCGTTT TERM 2426 2320604 - 2320588 - T 93 -8 -5.42514 | opp_overlap 2320588, overlap 2320581 2320580 TTACAAACGAAAAAA CCGGAT GAATA ATCCGG TTTTTATCAAACAAA TERM 2427 2320588 - 2320604 + T 84 -8 -4.82901 | opp_overlap 2320588 2320581 2320580 TTACAAACGAAAAAA CCGGAT GAATA ATCCGG TTTTTATCAAACAAA MADE_02155 2321261 - 2320626 - | putative regulator in two-component regulatory system ; LuxR family protein TERM 2428 2321939 - 2321929 - g 71 -6.8 -4.07687 | AGTGCTGTCGGAAAA GGTG AAA CACC CAACTCGGTCCGGCA TERM 2429 2322109 - 2322095 - g 72 -5.6 -4.41616 | opp_overlap 2322094 ACTCGCTTAAAGAAA GTAGGC TTT GCCGAC GTGGTTATGTGGTAC MADE_02156 2321435 - 2322166 + | putative methyltransferase TERM 2430 2322686 - 2322706 + G 73 -2.5 -5.10665 | overlap 2322687 GCGCAAACAGGGTTA TTGGTGTAG ACC CTACACAAC TTTTCTTTATTCAAT MADE_02157 2322226 - 2323224 + | putative methyltransferase with S-adenosyl-L-methionine-dependent methyltransferase domain TERM 2431 2323461 - 2323439 - g 71 -7.9 -3.91798 | GAAGGTGCAACCAAA CCATTTATT GTTGG AATAAATGG CAGCCAAGGGTCAGG MADE_02158 2323319 - 2324191 + | kinase-like protein TERM 2432 2324388 - 2324398 + G 72 -3.2 -5.06414 | ATTCATCATTGAAAA TGGC GCG GCTA TTTTTATTCCCCACG MADE_02159 2324188 - 2324997 + | HAD-superfamily hydrolase, subfamily IIB TERM 2433 2325080 - 2325099 + G 71 -7.2 -4.07568 | overlap 2325081 GTCCTACCGAAGAGC TTGAAGCA GAGT TGCTTCAG TTTTCACAAAAGCGC TERM 2434 2325124 - 2325111 - g 72 -5.9 -4.37886 | opp_overlap 2325111 TCAGTTTTCACAAAA GCGCC CGAT GGCAC TTATTTTACCGTCTC MADE_02160 2325010 - 2326233 + | glycosyltransferase involved in cell wall biogenesis MADE_02161 2326239 - 2327993 + | putative sucrose phosphorylase TERM 2435 2328013 - 2328036 + F 77 -9.6 -3.51825 | opp_overlap 2328013 2328011 2328015, overlap 2328015 ACTGGTCGATAAATA TACCGCGGTA CGGA TACTGCGGTG TTATGATTAACCTAC TERM 2436 2328015 - 2328034 + F 77 -10 -3.33214 | opp_overlap 2328015 2328013 2328011, overlap 2328013 TGGTCGATAAATATA CCGCGGTA CGGA TACTGCGG TGTTATGATTAACCT MADE_02162 2328068 - 2328745 + | phosphoglycolate phosphatase TERM 2437 2329309 - 2329293 - g 72 -5.1 -4.62904 | overlap 2329294 AAACATTCGTAAAAA GGCCAAT GAT ATTGGCT GTGACGATACGCTCG MADE_02163 2328874 - 2330097 + | putative molybdopterin biosynthesis protein MoeA TERM 2438 2331526 - 2331551 + G 76 -7.5 -4.21773 | gap 1 CGTAGGTTTAAGCGC GGCG-GCGATCA TGT TGGGCGCACGCC TTCTTTATGTTCAAC MADE_02164 2330228 - 2331601 + | multidrug efflux protein NorA MADE_02165 2332488 - 2331619 - | isoquinoline 1-oxidoreductase maturation factor MADE_02166 2333689 - 2332508 - | hypothetical protein TERM 2439 2332904 - 2332892 - G 85 -6.3 -5.13722 | opp_overlap 2332887 2332892 GTTATGAAAATAAAA GTACT CTA AGTAC TTAAATTCGGTTTGT MADE_02167 2334525 - 2333689 - | ATPase associated with various cellular activities, AAA_5 TERM 2440 2335375 - 2335365 - g 82 -5.4 -5.1287 | CCGATACCTAAAAAA TACC CAA GGTA AAGCTATTACGTCTA MADE_02168 2334796 - 2335761 + | cysteine synthase A TERM 2441 2335786 - 2335809 + F 100 -8.8 -5.65927 | opp_overlap 2335786 GTTTTAATTAGAGAA GCGAGGCATT TGTT GAAGCCTCGC TTTTTTGTTTCAATC TERM 2442 2336026 - 2336038 + G 82 -6.9 -4.7416 | opp_overlap 2336013 2336012, overlap 2336012 ACGCGTATGTGGTAC GCCCT TTT GGGGC TTTTTACAGTTTTGA MADE_02169 2336005 - 2336463 + | putative lipoprotein MADE_02170 2336703 - 2336885 + | hypothetical protein MADE_02173 2338808 - 2338951 + | hypothetical protein MADE_02174 2339106 - 2339954 + | hypothetical protein TERM 2443 2340693 - 2340683 - g 80 -5.4 -5.02074 | CTACGCTTTAAAAAA CATC GAA GATG GAGAAATCGAAAAAG MADE_02175 2340519 - 2340944 + | hypothetical protein TERM 2444 2340982 - 2341035 + T 83 -10.9 -3.63837 | opp_overlap 2340994 2341016, overlap 2340983 CTCACTCCGTTCGCT GGGGCGCATACACGCAGGGCC GCTTCGCTATTA AGCCCTGCGTGCCTGCGCCCG TTATTGAAAAGTTAT TERM 2445 2340983 - 2341034 + T 93 -14.4 -2.7782 | opp_overlap 2340994 2341016, overlap 2340982 TCACTCCGTTCGCTG GGGCGCATACACGCAGGGCC GCTTCGCTATTA AGCCCTGCGTGCCTGCGCCC GTTATTGAAAAGTTA TERM 2446 2341342 - 2341331 - T 73 -5.8 -4.65933 | CACCCTTAAAACAAA GAGC AATC GCTC TGTAAGTGAAAATAA MADE_02176 2342645 - 2341608 - | ISCps1, transposase TERM 2447 2342434 - 2342448 + g 75 -11.4 -3.01791 | opp_overlap 2342434 TTAGCTGATATTAAA CGGGCA TCA TGCCCG TATTCACGCGCACAT TERM 2448 2342448 - 2342434 - G 87 -11.4 -3.83998 | opp_overlap 2342434 TTAGCTGATATTAAA CGGGCA TCA TGCCCG TATTCACGCGCACAT TERM 2449 2343105 - 2343091 - g 72 -5.7 -4.38154 | ACAGGTTCCAGAAAA GCCAT TCGGT ATGGC TGCTGAGTTCATGGC MADE_02177 2342855 - 2343202 + | hypothetical protein MADE_02178 2343587 - 2343306 - | plasmid stabilization system protein TERM 2450 2343554 - 2343568 + g 76 -4.2 -5.0538 | overlap 2343556 CGAAAATAGCCTCAC GATCGT CCA ACGAAC TTTTTTCCCATAAGA MADE_02179 2343868 - 2343584 - | RelB protein TERM 2451 2344082 - 2344066 - H 79 -9.5 -3.72576 | CTCTCTTTGACCAAA GTAATCC AAT GGATTAC AATCAGCGTTATGCT MADE_02180 2344093 - 2344440 + | RelE-like Cytotoxic translational repressor of toxin-antitoxin stability system MADE_02181 2344789 - 2344667 - | hypothetical protein MADE_02182 2345037 - 2344828 - | hypothetical protein TERM 2452 2345026 - 2345040 + g 76 -2.1 -5.39755 | overlap 2345009 CATTAGTTCCTTAAC GGCTT TATCC AAGTC TTTTTTCTGATTCTG MADE_02183 2345278 - 2345111 - | hypothetical protein MADE_02186 2346529 - 2346786 + | Antitoxin of toxin-antitoxin stability system MADE_02187 2346813 - 2347076 + | toxin of toxin-antitoxin stability system MADE_02188 2347173 - 2347610 + | hypothetical protein MADE_02189 2347759 - 2347998 + | hypothetical protein MADE_02190 2348041 - 2348163 + | putative lipoprotein TERM 2453 2348241 - 2348227 - f 70 -8.6 -3.39595 | GCCAAGTACTTACAA TTGCAG GCG CTGCAA CGAAAACTTTTATGA MADE_02191 2348353 - 2349144 + | phenazine biosynthesis protein, PhzF family TERM 2454 2349191 - 2349179 - T 77 -6.3 -4.48823 | AACTAATCGATAAAA GAGAA TTC TTCTC TCGAGTGTTACCGCT TERM 2455 2349224 - 2349246 + T 75 -7.7 -4.03413 | opp_overlap 2349224 CCTCAAACAAAAAAA GCGGAAGAT ATTTA ACCTTCCGC TTTCTCTCACGCAAT TERM 2456 2349246 - 2349224 - T 100 -9.9 -5.95539 | opp_overlap 2349224 CCTCAAACAAAAAAA GCGGAAGAT ATTTA ACCTTCCGC TTTCTCTCACGCAAT MADE_02192 2351045 - 2349303 - | gamma-glutamyltranspeptidase MADE_02193 2351839 - 2351075 - | enoyl-CoA hydratase MADE_02194 2351953 - 2352537 + | membrane protein, Rhomboid family TERM 2457 2352663 - 2352616 - T 75 -10 -3.11568 | opp_overlap 2352627, overlap 2352627 CAAAGAAAAATATCA CACCAGAAAAAGGCCCGAACTC TTTT GAATTTGGGCCTTTTTATATTG ACTGTGCGATAACAA TERM 2458 2352652 - 2352627 - T 93 -9.7 -4.95758 | opp_overlap 2352627, overlap 2352616 ATCACACCAGAAAAA GGCCCGAACTC TTTT GAATTTGGGCC TTTTTATATTGACTG TERM 2459 2352627 - 2352652 + T 93 -9.7 -5.10767 | opp_overlap 2352616 2352627 ATCACACCAGAAAAA GGCCCGAACTC TTTT GAATTTGGGCC TTTTTATATTGACTG TERM 2460 2352701 - 2352680 - T 89 -9.4 -4.30719 | CTGTGCGATAACAAA CCCCGTGC ATTTAA ACACGGGG GAAATCGCTCGTTAA MADE_02195 2355219 - 2352724 - | Dipeptidyl peptidase IV TERM 2461 2353475 - 2353532 + g 72 -6.3 -4.20027 | gap 1, opp_overlap 2353479 2353481, overlap 2353476 TCGGTATGCGATGAC TCAATAGCGACGATGTTAG-GCACTGCC CAT GGTAGCGCGTTAAAATCGGCGCTAGTGC TTTGTGTAATTTGTT TERM 2462 2353476 - 2353531 + g 70 -9.8 -3.10389 | gap 1, opp_overlap 2353479 2353481, overlap 2353475 CGGTATGCGATGACT CAATAGCGACGATGTTAG-GCACTGCC CAT GGTAGCGCGTTAAAATCGGCGCTAGTG CTTTGTGTAATTTGT TERM 2463 2354475 - 2354459 - G 70 -2.1 -4.98531 | opp_overlap 2354460 2354466, overlap 2354460 TTGTCAAAGTAAAAA GGCGTTG GTG CTACGCT CTTGTTTTCGTTGGC MADE_02196 2355391 - 2355945 + | Glutathione peroxidase MADE_02197 2357004 - 2358626 + | response regulator receiver protein MADE_02198 2359190 - 2358672 - | GCN5-related N-acetyltransferase MADE_02199 2360214 - 2359330 - | molybdenum cofactor biosynthesis protein A MADE_02200 2360755 - 2362488 + | ABC transporter, ATP-binding protein TERM 2464 2362641 - 2362653 + G 76 -9.1 -3.83205 | opp_overlap 2362639 CAAACAATAAACTTG GCGAG CAG CTCGC TTTAATGTACGAAAT MADE_02201 2362505 - 2362720 + | hypothetical protein MADE_02202 2362788 - 2363111 + | hypothetical protein TERM 2465 2363182 - 2363202 + T 89 -8.9 -4.6644 | opp_overlap 2363161 2363182 CTATTCTTTAACTAA GCGGCACCG CAT TGATGCCGC TTTTTGCCATGTCTT TERM 2466 2363202 - 2363182 - T 77 -10.4 -3.34344 | opp_overlap 2363182, overlap 2363161 CTATTCTTTAACTAA GCGGCACC GCATT GATGCCGC TTTTTGCCATGTCTT MADE_02203 2364578 - 2363235 - | 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase TERM 2467 2363823 - 2363848 + g 70 -10.5 -2.54687 | overlap 2363822 GTCGTAAGGCTTACC CGTTAGCGTGT CTAC ACGCGTTAACG CTTGCTCGTAGTTAA TERM 2468 2364735 - 2364725 - R 70 -5.4 -4.46514 | opp_overlap 2364725 ATGGAGCTAAATAAA TGCT GAC AGCA CTTTATCACATTTAC MADE_02204 2365685 - 2364750 - | vitamin B12-transporter ATPase MADE_02205 2366661 - 2365690 - | putative hemin transport system permease transmembrane protein MADE_02206 2367150 - 2366677 - | phosphotyrosine protein phosphatase TERM 2469 2367502 - 2367492 - g 79 -4.6 -5.10208 | opp_overlap 2367492 TAATGCGAAGAAAAA CGGC CAG GCCA TTGTGGTGGGTGGGG MADE_02207 2367262 - 2367966 + | peptidase E MADE_02208 2368638 - 2367937 - | cobyrinic acid a,c-diamide synthase:dethiobiotin synthase MADE_02209 2369612 - 2368635 - | Biotin biosynthesis protein BioC TERM 2470 2369200 - 2369213 + g 70 -2.3 -5.00616 | overlap 2369193 GCGATGTCTACACCG GTTGC CGTT GCACC TTTTTTCACCAACGC TERM 2471 2369265 - 2369283 + g 79 -10.2 -3.59627 | overlap 2369255 ACAGCCTATATCGAG GGCCTCGC CCT GCAAGGCC TTTGGCAAGTTTGCT MADE_02210 2371012 - 2369612 - | 8-amino-7-oxononanoate synthase MADE_02211 2372136 - 2371012 - | Biotin synthase TERM 2472 2371813 - 2371842 + g 76 -8.7 -4.17762 | gap 1, opp_overlap 2371819, overlap 2371819 CCACGCCGCGCCCAT GCAAAAGCGGGTTG AGC CAACTTGCT-TTGC TTCTTTTGCGCGCTG TERM 2473 2371819 - 2371837 + g 76 -7.4 -4.20834 | opp_overlap 2371819, overlap 2371813 CGCGCCCATGCAAAA GCGGGTTG AGC CAACTTGC TTTGCTTCTTTTGCG MADE_02212 2372208 - 2373500 + | adenosylmethionine--8-amino-7-oxononanoate transaminase TERM 2474 2373770 - 2373745 - g 77 -10.5 -3.32993 | overlap 2373746 GCATTGAGAGACGAA GTTGCAAGCTC TTCT GAGCTTGCAAA GCAGCATGGCTTCTC TERM 2475 2373769 - 2373746 - g 83 -14 -2.59475 | overlap 2373745 CATTGAGAGACGAAG TTGCAAGCTC TTCT GAGCTTGCAA AGCAGCATGGCTTCT MADE_02213 2373619 - 2374140 + | hypothetical protein MADE_02214 2374511 - 2374792 + | hypothetical protein MADE_02215 2376125 - 2374836 - | CN5-related N-acetyltransferase TERM 2476 2375916 - 2375926 + g 77 -6.8 -4.46757 | GCTTAACCTATCGGT CGTG AAG CACG TTTTCTCAATATATT MADE_02216 2377609 - 2376122 - | glutathione synthase TERM 2477 2377868 - 2377882 + G 79 -8.6 -4.28361 | GAGTACGTATGTTAT TAGCCA GCC TGGCTA TTTTGATCGGATTAC MADE_02217 2377861 - 2378109 + | putative sodium/calcium exchange protein TERM 2478 2378679 - 2378692 + G 73 -2.3 -5.1287 | TGCTATATCACTAGG TGGCG CTGG CGCAA TTTTTTGGATGTGGA MADE_02218 2378410 - 2379816 + | putative amino acid permease TERM 2479 2379870 - 2379852 - T 95 -11.8 -4.29304 | opp_overlap 2379852 TCAGCACAACAGAAA GGCTAACT GCA AGTTAGCC TTTTTTAGTTTCTAA TERM 2480 2379852 - 2379870 + T 100 -11.8 -5.42514 | opp_overlap 2379852 TCAGCACAACAGAAA GGCTAACT GCA AGTTAGCC TTTTTTAGTTTCTAA TERM 2481 2379960 - 2379930 - T 79 -9.1 -3.88583 | gap 1 GAAACTTTTGATAAA TTG-CGGTGGCG AGTTACAA CGCCACCGGCAA GTGCCCTGTCTTCAC MADE_02219 2380599 - 2379943 - | predicted transcription negative regulator TERM 2482 2380334 - 2380315 - G 76 -9.2 -3.72576 | opp_overlap 2380296, overlap 2380298 2380296 GCCTTCGTTACTAAA CGGGCTGT GTTT ACTGCCCG GAGGATTTCGCAAAT MADE_02220 2381276 - 2380650 - | hypothetical protein TERM 2483 2381055 - 2381066 + g 75 -3 -5.1675 | GGTTTCCTGTACGTT GATT AGCG AATC TTTTTTACTGCCTAC MADE_02221 2381406 - 2381915 + | Thioesterase superfamily protein TERM 2484 2382051 - 2382029 - T 100 -7.7 -5.95539 | opp_overlap 2382029 CGCTAAACAAAAAAA GCAGGCCAA ATAGG TCAGCCTGC CTTTTGTTTTTATCC MADE_02222 2384644 - 2382083 - | putative TonB-dependent receptor TERM 2485 2382131 - 2382117 - G 79 -7.8 -4.52589 | TTGCCGTATACAAAA CGGCCT GTG AAGCCG TAAGGCGAGAAGCCT TERM 2486 2384715 - 2384729 + r 82 -8.6 -4.18213 | overlap 2384711 CAAGCGCTTTAGAGC GCACTT ACC AAGTGC TTCTTCTTTCTCGTT TERM 2487 2384851 - 2384841 - R 73 -5.4 -4.55491 | GAGTTAAGCACAAAA TAGC GGG GCTA TACAATACTAAAGTA TERM 2488 2385067 - 2385078 + r 72 -4.4 -4.78121 | TGCCAAAAAGCTTAC GCTT TTTT AAGC TTCTTTTTTAATTTT MADE_02223 2385399 - 2385229 - | hypothetical protein TERM 2489 2385348 - 2385367 + g 85 -3.6 -5.51353 | CTTCATCGTTAATCC GAATAATC ATTT GACTATTC TTTTTCTTCTTTTTG MADE_02224 2385589 - 2385771 + | hypothetical protein TERM 2490 2385800 - 2385773 - T 90 -11.4 -3.88559 | opp_overlap 2385778, overlap 2385778 AATTAGCCTCATAAA GAAAACGGAAGC CGAG GCTTCCGTTTTG CACATTTCGCTAATT TERM 2491 2385795 - 2385778 - T 95 -11.3 -4.99043 | opp_overlap 2385778, overlap 2385773 GCCTCATAAAGAAAA CGGAAGC CGAG GCTTCCG TTTTGCACATTTCGC TERM 2492 2385778 - 2385795 + T 93 -11.3 -4.17089 | opp_overlap 2385778 2385773 GCCTCATAAAGAAAA CGGAAGC CGAG GCTTCCG TTTTGCACATTTCGC MADE_02225 2386394 - 2385843 - | putative alkylhydroperoxidase AhpD family core domain protein MED92 MADE_02226 2386547 - 2387137 + | transcriptional regulator, TetR family protein TERM 2493 2387158 - 2387170 + T 76 -9.1 -3.63744 | opp_overlap 2387147 2387157 2387156, overlap 2387156 ATGACGGCTCAAAGG CGCTG AAA CAGCG TATTTTCACAACGAG MADE_02227 2387698 - 2387216 - | hypothetical protein TERM 2494 2387812 - 2387800 - R 82 -7.7 -4.57503 | TAAGAGAACAACAAA CGCAA TAA TTGCG CAATAAGCAATATCC MADE_02228 2387960 - 2387784 - | putative orphan protein MADE_02229 2389159 - 2387960 - | 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase TERM 2495 2389341 - 2389359 + H 76 -4.6 -5.02476 | TTGAACATCTTCTTG TAACTGAC ATT GTTAGTTG TTTTTTGCGGGCTAT TERM 2496 2390879 - 2390858 - g 74 -10.9 -2.77043 | overlap 2390857 2390860 TCTATTATGGCAAAG CATCAGGCA GATA TGCCCGATG AGCTTGGCGTGGGTC MADE_02230 2389478 - 2390911 + | tRNA-i(6)A37 thiotransferase enzyme MiaB TERM 2497 2391299 - 2391278 - g 86 -11.5 -3.75465 | GAATATCAAAACTAA GCGCGGCGT GATT AAGCCGCGC AACCCCAACCAGGCG TERM 2498 2391816 - 2391835 + G 70 -5 -4.49556 | opp_overlap 2391816, overlap 2391813 2391817 GAAGTATTAAGCGAA GTGAACGA TATA TCGTTCAA TTTCTTTCATGCAGA MADE_02231 2390949 - 2392061 + | putative ATP-binding protein in pho regulon MADE_02232 2392058 - 2392534 + | hypothetical protein MADE_02233 2392650 - 2393507 + | Mg/Co transporter MADE_02234 2393612 - 2395126 + | apolipoprotein N-acyltransferase MADE_02235 2395279 - 2395596 + | plasmid stabilization system MADE_02236 2395838 - 2395590 - | Antitoxin of toxin-antitoxin system Phd TERM 2499 2395991 - 2395970 - R 91 -10.1 -4.57569 | opp_overlap 2395969 TTACTTTTGGAAAAA CGGCGCC TTACATTT GGCGCCG CTCTCATTTAATGTA MADE_02237 2398108 - 2396030 - | phosphate acetyltransferase TERM 2500 2397864 - 2397876 + g 72 -4.8 -4.66537 | opp_overlap 2397864, overlap 2397874 TCGATAACGGTAACA GCGT CTTGT ACGC TTTTCTCTTCAAAGC TERM 2501 2398006 - 2398025 + g 71 -10 -3.28712 | GATGGGCTATGATTG CGGTGGAG CGTT CTTCACCG TTATCACCGCGGCGC MADE_02238 2399394 - 2398213 - | acetate/propionate kinase TERM 2502 2400081 - 2400070 - g 73 -4.4 -4.80487 | opp_overlap 2400070 GACAAGGAAAATAAA GAAC GCAA GTTC TTACATAAAGGCATT MADE_02239 2399803 - 2400258 + | small heat shock protein TERM 2503 2400294 - 2400311 + T 100 -14.1 -5.43866 | TTTCCCAACTTTTAG CGGCGCC TTAC GGCGCCG TTTTTTTGCGCGTTA MADE_02240 2400760 - 2400368 - | hypothetical protein MADE_02241 2401385 - 2400846 - | hypothetical protein TERM 2504 2401640 - 2401614 - R 83 -9.4 -3.90112 | opp_overlap 2401620, overlap 2401615 GCGGGCGGAAGGAAA GCGCCAGCAGTA TGC TACTGCTGGCTT GGCAACTTAAATATA TERM 2505 2401639 - 2401615 - R 91 -12.9 -2.93853 | opp_overlap 2401620, overlap 2401614 CGGGCGGAAGGAAAG CGCCAGCAGTA TGC TACTGCTGGCT TGGCAACTTAAATAT MADE_02242 2402108 - 2401647 - | Transcription elongation factor GreA TERM 2506 2402039 - 2402050 + g 79 -2.2 -5.49568 | CAATCGACTCGATTA TACG TGGG CGTG TTTTTGTTTTAAGTT TERM 2507 2402185 - 2402157 - R 89 -11.8 -3.46068 | opp_overlap 2402162, overlap 2402162 CTTGTAATTTAAACA GAAAAGTGCGCC GCAAA GGCGCACTTTTT ATTGATTCACACAAA TERM 2508 2402180 - 2402162 - R 100 -11.7 -4.81359 | opp_overlap 2402162, overlap 2402157 AATTTAAACAGAAAA GTGCGCC GCAAA GGCGCAC TTTTTATTGATTCAC TERM 2509 2402162 - 2402180 + r 100 -11.7 -5.1963 | opp_overlap 2402162 2402157 AATTTAAACAGAAAA GTGCGCC GCAAA GGCGCAC TTTTTATTGATTCAC TERM 2510 2402233 - 2402209 - R 79 -11.5 -2.53748 | opp_overlap 2402195 2402209, overlap 2402208 2402206 2402201 ACACAAATGTAATAT TGCTAGGATAC CTC GTATCCTAGCG TATGTCATCAGTGTT TERM 2511 2402209 - 2402233 + r 93 -13.7 -2.96042 | opp_overlap 2402209 2402208 2402206 2402201, overlap 2402195 ACACAAATGTAATAT TGCTAGGATAC CTC GTATCCTAGCG TATGTCATCAGTGTT MADE_02243 2405462 - 2402241 - | carbamoyl-phosphate synthase large subunit MADE_02244 2406798 - 2405476 - | carbamoyl-phosphate synthase small subunit TERM 2512 2406671 - 2406698 + g 74 -7 -4.21827 | opp_overlap 2406671 AAACCCCACAAAAAA CGGGAGTTATTG ATAA CAATACATCCCG TTTTACGATCTTTGC TERM 2513 2406698 - 2406671 - G 90 -7 -5.28826 | opp_overlap 2406671 AAACCCCACAAAAAA CGGGAGTTATTG ATAA CAATACATCCCG TTTTACGATCTTTGC MADE_02245 2407762 - 2406959 - | dihydrodipicolinate reductase TERM 2514 2408022 - 2407993 - H 83 -9.3 -4.07568 | opp_overlap 2407996 2408006, overlap 2407978 2407996 TTCGCTTGCTTAAAA CAAGGCGAACCTC GCGC AAAGTACGCCTTG TAAACGATTGCGCTT MADE_02246 2408172 - 2408867 + | cytochrome b561 family protein MADE_02247 2408908 - 2409075 + | hypothetical protein TERM 2515 2409054 - 2409067 + T 75 -9.5 -3.43151 | opp_overlap 2409054 ATTTATCAATAAAAA GGGGC TAAT GCCCC TTGATTAATACTTGA TERM 2516 2409067 - 2409054 - T 93 -9.5 -5.14163 | opp_overlap 2409054 ATTTATCAATAAAAA GGGGC TAAT GCCCC TTGATTAATACTTGA MADE_02248 2411026 - 2409116 - | Propionyl CoA synthase TERM 2517 2409323 - 2409309 - G 79 -9.2 -4.07687 | opp_overlap 2409308, overlap 2409295 ATTGCCCGCTTAAAA CAGGCC ACA GGCCCG ATAGTATCTCGCACT TERM 2518 2410023 - 2410013 - G 72 -8.2 -3.76492 | overlap 2410014 TCTAATCGCACGAAA CGCC GTG GGCG CAGCAAACAGCACAT TERM 2519 2410088 - 2410070 - G 73 -7.4 -4.10161 | opp_overlap 2410081 TATCATTCGCCAAAA TGCACCAG CGT CTGGTGTA CCTACCGGTTTTCCT MADE_02249 2413745 - 2411169 - | sensory box/GGDEF/EAL domain protein MADE_02250 2414083 - 2414196 + | hypothetical protein MADE_02251 2414705 - 2414193 - | cytochrome c TERM 2520 2414800 - 2414790 - R 79 -6.8 -4.63592 | opp_overlap 2414791 GCGCAATAAAAATAA CGGT GAA ACCG CCCTTTCAAGGGATT TERM 2521 2415090 - 2415106 + r 79 -9.4 -3.6869 | opp_overlap 2415090 CCTAGATACGAAAAA GCCCTC AATAA GAGGGC TTTCGCATTGGTCTC TERM 2522 2415106 - 2415090 - R 93 -9.4 -4.84527 | opp_overlap 2415090 CCTAGATACGAAAAA GCCCTC AATAA GAGGGC TTTCGCATTGGTCTC MADE_02252 2416303 - 2415134 - | Chaperone protein dnaJ TERM 2523 2416445 - 2416419 - R 100 -15.2 -4.39998 | TATTTACACAACAAA GGCGCAACAAGA AAT TCCTGCTGCGCC TGAACTGCTTAAACG TERM 2524 2416485 - 2416460 - R 70 -9.7 -2.74322 | overlap 2416459 CTGAACTGCTTAAAC GGCCCGCTACT TTGA ATTAACGGGCC TGACACAACAGTTTA MADE_02253 2418426 - 2416498 - | Chaperone protein dnaK TERM 2525 2417460 - 2417482 + g 80 -7.1 -4.57837 | CTGAATCAGCTAGTG CTTGCTTAA GTGGG TTAAGCGAG TTTTTCACAAGGTCT MADE_02254 2419179 - 2418544 - | heat shock protein GrpE TERM 2526 2418930 - 2418987 + g 95 -11.9 -4.04927 | opp_overlap 2418972 TTTCTACTTCACCTT CAGCACGACGACGTGCGTTGTCAGCGT CTGC ACGCGCACGAAGCACGCCATCTTGCTG TTCTTTGATGGTTGC MADE_02255 2419283 - 2419170 - | hypothetical protein MADE_02256 2419428 - 2422448 + | Multidomain protein, contains Na+/proline symporter PutP-like domain, sensory histidine kinase and receiver domain MADE_02257 2423272 - 2422445 - | putative transposase MADE_02258 2423976 - 2423485 - | transposase IS3/IS911 family protein TERM 2527 2423699 - 2423730 + g 71 -9.6 -3.19192 | gap 1, overlap 2423701 TTCCATTGCTGGATT TGCT-CCGGGAAAAG GCC CTTTTTCCGGCAGTA TTCACTTACCTCAAC TERM 2528 2423701 - 2423728 + g 71 -10 -3.1585 | gap 1, overlap 2423699 CCATTGCTGGATTTG CT-CCGGGAAAAG GCC CTTTTTCCGGCAG TATTCACTTACCTCA TERM 2529 2424094 - 2424073 - g 84 -8.1 -4.64861 | opp_overlap 2424063 TTTTTGGAAAACAAA CGTTTCCTA TTGG TAGAAAACG ATGAGCAAGTCGCGA MADE_02259 2424061 - 2424432 + | two-component sensor histidine kinase MADE_02260 2425141 - 2424473 - | Response regulator, LuxR family (CheY, HTH domains) TERM 2530 2425307 - 2425280 - R 75 -9.9 -3.36823 | overlap 2425275 2425282 TCGCGTAAAAGTGAA CACGCCTAAGC AGAAAA GCTTAGGCGTC ATGAACGTCGCTAAG TERM 2531 2425305 - 2425282 - R 85 -12.5 -3.25113 | overlap 2425280 2425275 GCGTAAAAGTGAACA CGCCTAAGC AGAAAA GCTTAGGCG TCATGAACGTCGCTA MADE_02261 2427720 - 2425342 - | putative TonB-dependent receptor TERM 2532 2427529 - 2427577 + g 76 -11.8 -2.50994 | overlap 2427528 CTTTCCTTTTTGCTC TTCGGCGTCGGTATTAGTTTGG CTATC CTGAGCAAATACCGGCGCTGAG CTTAGTACACTTGCC TERM 2533 2428163 - 2428181 + G 73 -7.5 -4.16284 | CAATAACATTGGCGT GTTCACA GGCGA TGTGAAC TTTGTTGAAACCTAT MADE_02262 2428044 - 2429330 + | GntP family permease MADE_02263 2429430 - 2429317 - | hypothetical protein TERM 2534 2429464 - 2429477 + GH 72 -9.5 -2.94232 | overlap 2429463 AGAAGAGTAACCGGT GGGCG CTTG CGCCC CTTGTTTAACGCGAA MADE_02264 2429395 - 2430828 + | homoserine O-acetyltransferase MADE_02265 2430825 - 2431886 + | poly (3-hydroxybutyrate) depolymerase TERM 2535 2432554 - 2432570 + G 85 -6.5 -5.21709 | opp_overlap 2432553 GTGAGTGTTGAAGAG CTTGCTG ATA CCGCAAG TTTTTTGATGTCGCC MADE_02266 2431879 - 2432646 + | putative 3-hydroxybutyrate dehydrogenase TERM 2536 2432704 - 2432736 + T 72 -3.3 -5.13722 | opp_overlap 2432705, overlap 2432705 2432722 CTAAGGGGCAACCAA AGCCTGATTTCGATA CTG TAACGGGCTCAGGCC TTTTATTTTCATAGC MADE_02267 2433927 - 2432767 - | alcohol dehydrogenase, iron-containing TERM 2537 2432904 - 2432887 - G 75 -2.6 -5.15969 | GGCTAAGGCAAAAAA GGCTTC TTTATC GATGCC AAAGTCAGCGGGCGT TERM 2538 2433073 - 2433061 - G 72 -4.7 -4.66938 | overlap 2433062 ACTGGGAATAGAAAA TGCGG TAA CCGCG GGTAACAACATAGCA TERM 2539 2434716 - 2434702 - g 73 -10 -3.38316 | overlap 2434698 TCAGCAGTGAACGAA GTGGTG CTT CACCAC GGGAAAGTTGCTCAC MADE_02268 2434264 - 2435139 + | NAD kinase TERM 2540 2435214 - 2435185 - f 79 -11.5 -2.62616 | GCATTTCTTACACTA GCCTGTAGCATTT TCTC AAGCGCTACAGGC TTGAAAAATAAAGAT MADE_02269 2435395 - 2435904 + | stress response DNA-binding protein Dps TERM 2541 2435885 - 2435911 + F 73 -6.7 -4.27474 | gap 1 ACATTGAATCAGGTA GCGGTGAATTAC AGCA GTAATTCGC-GC TTTGTTAATAGCTTT TERM 2542 2435992 - 2435975 - f 90 -11.3 -3.83026 | opp_overlap 2435975 GGTGGCCATAGTAAA GGAGAGC TAAC GCTCTCC TTTTTACTGTATAAA TERM 2543 2435975 - 2435992 + F 95 -11.3 -4.84527 | opp_overlap 2435975 GGTGGCCATAGTAAA GGAGAGC TAAC GCTCTCC TTTTTACTGTATAAA TERM 2544 2437447 - 2437434 - g 85 -6.7 -5.17576 | opp_overlap 2437434 GACGAATTCAAAAAA CCTGT TAGC ACAGG TTTAGATACCGTTGA MADE_02270 2436213 - 2437898 + | ATPase involved in DNA repair, RecN MADE_02271 2438158 - 2438379 + | SmpA/OmlA family protein TERM 2545 2438393 - 2438412 + F 90 -9.3 -5.00027 | opp_overlap 2438380 2438393 AAGTAACGTGAAGAA GGTAGCG CTCTCC CGCTACC TTTTCTGTTTTTACT TERM 2546 2438412 - 2438393 - f 76 -9.3 -3.69338 | opp_overlap 2438393, overlap 2438380 AAGTAACGTGAAGAA GGTAGCG CTCTCC CGCTACC TTTTCTGTTTTTACT MADE_02272 2438489 - 2439142 + | thiopurine S-methyltransferase family protein MADE_02273 2440618 - 2439308 - | HlyD family secretion protein MADE_02274 2442303 - 2440621 - | Type I secretion system ATPase, PrtD TERM 2547 2440893 - 2440881 - G 74 -3.3 -4.98531 | overlap 2440863 2440860 CGGGCAAACCAAAAA CTGCC CGC GCCAG CGCTATTCTCTGCCT MADE_02275 2443048 - 2442347 - | hypothetical protein TERM 2548 2443145 - 2443155 + r 89 -5.4 -5.45802 | AACCGCGTGACCTTA CTAC CTT GTAG TTTTTGTTTTAGCAA TERM 2549 2443240 - 2443221 - R 91 -12.2 -3.84648 | opp_overlap 2443220, overlap 2443217 TAAGCTAAAAATTAA GTTGGGTG TCGC CACCCAAC ATCTGTATAAAAATC MADE_02276 2462094 - 2443264 - | vcbs repeat-containing protein TERM 2550 2449914 - 2449870 - G 71 -7.7 -3.8709 | overlap 2449872 2449873 2449903 AAACTCTTGTACAAA CACGCCGTCGCCATTACCGTC GTT GCCGGTAAAGGCAATGGCAAA ACCACCGCCAGAGAG TERM 2551 2449912 - 2449872 - G 88 -12.5 -3.52113 | overlap 2449870 2449873 2449903 ACTCTTGTACAAACA CGCCGTCGCCATTACCGTC GTT GCCGGTAAAGGCAATGGCA AAACCACCGCCAGAG TERM 2552 2449911 - 2449873 - G 83 -13.8 -2.70946 | overlap 2449872 2449870 2449903 CTCTTGTACAAACAC GCCGTCGCCATTACCGTC GTT GCCGGTAAAGGCAATGGC AAAACCACCGCCAGA TERM 2553 2450386 - 2450372 - G 76 -7.8 -4.30576 | CCTGTACCATCAAAA CGCTGC ATG GCAACG CCCCAGCTACTGTTA TERM 2554 2451246 - 2451217 - G 79 -10.7 -3.61398 | gap 1 GTCTTGGGGGAAGAA GGGC-TGACGACCA AGC TGGTCGCCTTGCCC ATAAGAAGAGATACG TERM 2555 2455532 - 2455522 - G 72 -5.4 -4.48713 | overlap 2455523 TTCATTAACAATAAA TTGG TCG CCAA GGGCTTGACCAGAAG MADE_02277 2462267 - 2462139 - | hypothetical protein MADE_02278 2462924 - 2462787 - | hypothetical protein MADE_02279 2464628 - 2463489 - | hypothetical protein TERM 2556 2464909 - 2464898 - H 73 -2.2 -5.252 | CACGCTGAGAAAAAA CCAA GCAA TCGG TTTACTTCACGCCTT TERM 2557 2465079 - 2465069 - H 73 -5.4 -4.63089 | GAGTTTAAAAAAGAA CGTT TAA AACG GACACTCACTTTCTT TERM 2558 2465673 - 2465689 + G 86 -10.9 -3.71848 | opp_overlap 2465671 AAGTAACAATGCAGG TGCTGAC GAA GTCAGCA TTGTTAATGGCAACC MADE_02280 2465470 - 2466141 + | hypothetical protein TERM 2559 2466404 - 2466425 + G 76 -8.8 -3.77219 | GCGAAAACATTTATG TTGGCGAA AACTTC TTCGCCAA TTTCAATTGCGTGAT MADE_02281 2466178 - 2466750 + | Acetyltransferase (isoleucine patch superfamily) protein MADE_02282 2467740 - 2466937 - | 2,5-diketo-D-gluconate reductase B TERM 2560 2467366 - 2467389 + g 72 -6.6 -4.26903 | opp_overlap 2467356 GGAAACACCAATATG GCGGGTGAGC CCAA GCTCTTTCGC TTTTGCTAAGCTGCC TERM 2561 2467917 - 2467942 + r 85 -7.5 -5.00616 | opp_overlap 2467917 2467919, overlap 2467919 TAGAGGCACTAAAAA GGCGCTGGCTT TTAA AAGCGAGCGGC TTTTTTAGAAAGACG TERM 2562 2467942 - 2467917 - R 83 -7.5 -4.76041 | opp_overlap 2467917 2467919, overlap 2467919 TAGAGGCACTAAAAA GGCGCTGGCTT TTAA AAGCGAGCGGC TTTTTTAGAAAGACG TERM 2563 2467988 - 2468000 + r 79 -6.9 -4.63486 | overlap 2467987 2467985 TATTTGCGCTTTGCT GGGCG ACC CGCTC TTTTATTAAGGCCCT MADE_02283 2468868 - 2467972 - | pseudouridine synthase (makes pseudouridine2605 in 23 S RNA) MADE_02284 2469502 - 2468909 - | hypothetical protein TERM 2564 2469080 - 2469091 + g 72 -5.8 -4.41548 | CCCGGGCACTTCTTT GTGG CCTA CCAC TTTTATCCAGTCTCG MADE_02285 2470352 - 2469489 - | chromosome segregation and condensation protein ScpA MADE_02286 2471082 - 2470462 - | Sua5/YciO/YrdC/YwlC family protein TERM 2565 2470752 - 2470807 + g 86 -9 -4.50988 | gap 1, opp_overlap 2470754, overlap 2470754 GTTTTGGATTTTGCA AACGCTTTGGCACTTCACGCGT-TGCT TTA AGCACAAACGTGTAGTGCCCAGGCGTG TTGTTTTTAATCTGC TERM 2566 2470754 - 2470805 + g 95 -11.6 -3.8493 | gap 1, opp_overlap 2470754, overlap 2470752 TTTGGATTTTGCAAA CGCTTTGGCACTTCACGCGT-TGCT TTA AGCACAAACGTGTAGTGCCCAGGCG TGTTGTTTTTAATCT TERM 2567 2470805 - 2470754 - G 86 -11.6 -3.55444 | gap 1, opp_overlap 2470754 2470752 TTTGGATTTTGCAAA CGCTTTGGCACTTCACGCGT-TGCT TTA AGCACAAACGTGTAGTGCCCAGGCG TGTTGTTTTTAATCT MADE_02287 2472127 - 2471234 - | PHP domain protein TERM 2568 2471884 - 2471866 - G 72 -8.8 -3.52113 | opp_overlap 2471866 2471865, overlap 2471864 ATCGCGCTAGAAATA GTGGGCAG TGT CTGTCCAC ATTTAAGCCTACAAC TERM 2569 2471866 - 2471884 + g 73 -11 -2.74144 | opp_overlap 2471864 2471866, overlap 2471865 ATCGCGCTAGAAATA GTGGGCAG TGT CTGTCCAC ATTTAAGCCTACAAC TERM 2570 2472378 - 2472345 - H 76 -6.7 -4.4078 | opp_overlap 2472353, overlap 2472353 GTGCGTGAATGAAAA CACATAAAGGCCCGT TTAT ACGGGCCTTTTTTTT ATCTTTTTGCAGTTG TERM 2571 2472370 - 2472353 - H 100 -12.7 -4.34859 | opp_overlap 2472353, overlap 2472345 ATGAAAACACATAAA GGCCCGT TTAT ACGGGCC TTTTTTTTATCTTTT TERM 2572 2472353 - 2472370 + H 100 -12.7 -6.18768 | opp_overlap 2472345 2472353 ATGAAAACACATAAA GGCCCGT TTAT ACGGGCC TTTTTTTTATCTTTT TERM 2573 2473140 - 2473129 - g 76 -2.2 -5.33405 | overlap 2473131 TTTAGTAAACAAAAA TGCG GCTT CACA AAGTGGACAGACACT TERM 2574 2473597 - 2473577 - g 76 -2.5 -5.35815 | overlap 2473579 GACACCAAAGAAAAA TCCGAGCAT ATC ATGCTAGTA GACTTAGCGCGTAAT TERM 2575 2473850 - 2473832 - g 91 -7.4 -5.24416 | overlap 2473846 GAAGTAGAACAAAAA CGCCGT GGAAGTT ACGGCG GCGCGGTAGGCTACT MADE_02288 2472407 - 2474095 + | anthranilate synthase component I MADE_02289 2474092 - 2474724 + | glutamine amido-transferase TERM 2576 2475585 - 2475575 - g 74 -8.2 -4.0098 | opp_overlap 2475572 2475580 GGTGAAGGTAAAGAA GCGC ACC GCGC CGCTATTGCTATGAA MADE_02290 2474717 - 2475748 + | anthranilate phosphoribosyltransferase MADE_02291 2475741 - 2477150 + | bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase MADE_02292 2477172 - 2478353 + | tryptophan synthase, beta protein TERM 2577 2478419 - 2478397 - g 75 -2.7 -5.18726 | gap 1, opp_overlap 2478379 2478400 2478401, overlap 2478401 CCTTGATAAGAAAAA CCAAGGCGCA TTCG TGC-CCTTCG TCATGGTGGGCGACC MADE_02293 2478371 - 2479162 + | tryptophan synthase subunit alpha MADE_02294 2479177 - 2479467 + | hypothetical protein TERM 2578 2479505 - 2479489 - T 78 -7.2 -4.43477 | opp_overlap 2479489 CTTATTTAACTAAAA CGGCCC GAAAG GGACCG TTTAAAAATATTTAG TERM 2579 2479566 - 2479532 - T 77 -7.9 -4.1399 | opp_overlap 2479532 TTAGCTATACAGAAA GCCCTCAATGGTTGA TGAAT TTAACTATCGAGGGC TTTTTTGTTGCTAAG TERM 2580 2479532 - 2479566 + T 100 -10.1 -5.5112 | opp_overlap 2479532 TTAGCTATACAGAAA GCCCTCAATGGTTGA TGAAT TTAACTATCGAGGGC TTTTTTGTTGCTAAG MADE_02295 2480184 - 2479744 - | general stress protein TERM 2581 2480595 - 2480585 - H 93 -6.8 -5.41143 | TACCGCCGAAAAAAA GCTG TAA CAGC GAAGAGTCTACATTT TERM 2582 2481236 - 2481226 - g 79 -4 -5.12707 | GCAAACCTCAAAAAA TTAC CGG GTAA AAGTGCTGAAAAAGT MADE_02296 2481086 - 2481322 + | Propeptide, PepSY amd peptidase M4 MADE_02297 2481324 - 2481998 + | response regulator in two-component regulatory system with PhoQ TERM 2583 2482126 - 2482147 + G 79 -9.5 -3.81022 | AGCTAAAATGAGCGA GCTTAGGTT GATG AACCTAGGC TTATTATCAGCGTTT MADE_02298 2481995 - 2483326 + | sensor histidine kinase TERM 2584 2483352 - 2483365 + T 80 -2.4 -5.58074 | opp_overlap 2483352 2483353 AAAAATTAGTAATAA GGAA AGGGGC TTCC TTTTTTTACTGATTG MADE_02299 2484714 - 2483677 - | hypothetical protein MADE_02300 2484794 - 2485162 + | D-erythro-7,8-dihydroneopterin triphosphate epimerase MADE_02301 2485198 - 2486082 + | putative sugar nucleotide epimerase TERM 2585 2486126 - 2486159 + T 74 -3.9 -5.10461 | TAGTGGAGCATTAGC GGACAGACACT CGGAGTAAAGAA AGTGACTGTCC TTTTTATTAAATCGA MADE_02302 2488935 - 2486413 - | ABC-type transport system, permease component TERM 2586 2486519 - 2486493 - G 70 -9.4 -3.34233 | opp_overlap 2486509 CTAGAAGGCCTACAA CCACTGCCCCAA CAC TTGGGGCTATAG CCCAATATTCAGGAT MADE_02303 2489634 - 2488936 - | putative Lipoprotein releasing system ATP-binding component of ABC transporter MADE_02304 2489651 - 2490307 + | lipase/acylhydrolase, GDSL family protein MADE_02305 2490354 - 2490536 + | hypothetical protein TERM 2587 2490653 - 2490617 - f 95 -13.2 -3.5771 | gap 1, opp_overlap 2490617 AAAAATGTGCTTAAA GTGGACAGACAC-TTTC ATTC GACATGTGTCTGTCCAC TTTTTGATTACAATG TERM 2588 2490617 - 2490653 + F 100 -13.2 -4.87291 | gap 1, opp_overlap 2490617 AAAAATGTGCTTAAA GTGGACAGACAC-TTTC ATTC GACATGTGTCTGTCCAC TTTTTGATTACAATG MADE_02306 2490779 - 2491753 + | hypothetical protein MADE_02307 2492709 - 2491771 - | NifR3/Smm1 family protein TERM 2589 2492172 - 2492192 + g 72 -6.1 -4.35742 | TCCAATCCCAGTATG CTGGAGGCT TAT ACCCTTCAG TTTTAGTCCTTGCAT MADE_02308 2493391 - 2493170 - | hypothetical protein TERM 2590 2493417 - 2493394 - R 71 -9.6 -2.77729 | overlap 2493387 AAAATATATACATGA TGAGCCTCCC TAAT AAGAGGCTCA AATATACATCTAGAC MADE_02309 2494359 - 2493451 - | Zn-dependent enzyme from deacylase/carboxypeptidase superfamily protein TERM 2591 2494535 - 2494505 - R 70 -5.5 -4.36914 | TGCGGCTGCAGAAAA GTGTCTGTCCA CTTTGTCTT TGGACAGAAAC AAAAAAACCAGCCGA TERM 2592 2494566 - 2494535 - R 100 -16.8 -4.03234 | opp_overlap 2494543, overlap 2494543 GTCTTTGGACAGAAA CAAAAAAACCAGCC GAAT GGCTGGTTTTTTCG ATATGGCGTCCCCTA TERM 2593 2494558 - 2494543 - R 100 -10.4 -6.04953 | opp_overlap 2494543, overlap 2494535 ACAGAAACAAAAAAA CCAGCC GAAT GGCTGG TTTTTTCGATATGGC TERM 2594 2494543 - 2494558 + r 93 -10.4 -5.1287 | opp_overlap 2494543 2494535 ACAGAAACAAAAAAA CCAGCC GAAT GGCTGG TTTTTTCGATATGGC TERM 2595 2494879 - 2494901 + r 83 -9.2 -4.09685 | overlap 2494881 GGACTGAAAACTTTA TTTCGAAAGC TTG GCTTTCGATA TTTTAGCAAATCAAG TERM 2596 2494881 - 2494899 + r 89 -11.8 -3.64716 | overlap 2494879 ACTGAAAACTTTATT TCGAAAGC TTG GCTTTCGA TATTTTAGCAAATCA TERM 2597 2495096 - 2495118 + r 83 -9.2 -4.09685 | overlap 2495098 GGACTGAAAACTTTA TTTCGAAAGC TAG GCTTTCGATA TTTTAGCAAATCAAG TERM 2598 2495098 - 2495116 + r 89 -11.8 -3.64716 | overlap 2495096 ACTGAAAACTTTATT TCGAAAGC TAG GCTTTCGA TATTTTAGCAAATCA MADE_02310 2496448 - 2495609 - | glutamyl-tRNA synthetase MADE_02311 2496960 - 2496439 - | hypothetical protein MADE_02312 2497437 - 2498111 + | putative unknown enzyme MADE_02313 2498104 - 2499060 + | putative transcriptional regulator TERM 2599 2499116 - 2499152 + F 85 -5.9 -5.243 | opp_overlap 2499119 2499128 2499135, overlap 2499117 2499118 2499128 GAAAGTCGCTGAGAA AAAGCAAAAAAACAGTG AAG CGCTGTTTTTTTGCGCC TTTTTTGCTGCTTTA TERM 2600 2499117 - 2499151 + F 79 -9.4 -3.72953 | opp_overlap 2499119 2499128 2499135, overlap 2499116 2499118 2499128 AAAGTCGCTGAGAAA AAGCAAAAAAACAGTG AAG CGCTGTTTTTTTGCGC CTTTTTTGCTGCTTT TERM 2601 2499118 - 2499150 + F 90 -12.9 -2.82145 | opp_overlap 2499119 2499128 2499135, overlap 2499117 2499116 2499128 AAGTCGCTGAGAAAA AGCAAAAAAACAGTG AAG CGCTGTTTTTTTGCG CCTTTTTTGCTGCTT TERM 2602 2499149 - 2499119 - f 100 -14.2 -4.83169 | opp_overlap 2499118 2499117 2499116 2499128, overlap 2499128 2499135 AGTCGCTGAGAAAAA GCAAAAAAACAGTG AAG CGCTGTTTTTTTGC GCCTTTTTTGCTGCT TERM 2603 2499128 - 2499140 + F 89 -5.5 -5.4477 | opp_overlap 2499119 2499128 2499135, overlap 2499118 2499117 2499116 GAAAAAGCAAAAAAA CAGTG AAG CGCTG TTTTTTTGCGCCTTT TERM 2604 2499140 - 2499128 - f 87 -3.3 -5.85011 | opp_overlap 2499128 2499118 2499117 2499116, overlap 2499119 2499135 GAAAAAGCAAAAAAA CAGTG AAG CGCTG TTTTTTTGCGCCTTT TERM 2605 2499306 - 2499316 + F 85 -5.4 -5.32565 | TGAATGTTTTTTACT CAAC CTG GTTG TTTTTTAATTAGTTC MADE_02314 2499376 - 2499774 + | hypothetical protein TERM 2606 2499834 - 2499853 + F 93 -7.8 -5.46657 | ATAGCTGCATTCGAA GGCCCC ACTGCTAC GGGGCC TTTTTTATTGGGCTA TERM 2607 2499917 - 2499900 - f 77 -8.5 -3.84451 | opp_overlap 2499899 2499897 2499900, overlap 2499895 2499894 CCGCCCAAACCCAAA GGTATAC TTTG GTATACC CTGTTATTTTACAAC MADE_02315 2500018 - 2500416 + | hypothetical protein TERM 2608 2500723 - 2500677 - T 100 -8.3 -6.20267 | gap 2, opp_overlap 2500677 2500691 2500695 TCAAAAACAAAAAAA CCGAGCTAAATAACGTATCCAAA AAA CTTGGTTAC-CTATTT-GCTCGG CTTGTCGTGCGCACT TERM 2609 2500727 - 2500754 + T 81 -7 -4.76123 | overlap 2500728 2500751 CTATTTGCTCGGCTT GTCGTGCGCA CTTTTACC TGCGCACGAG TTTTATTGCTCGTTT TERM 2610 2500728 - 2500753 + T 77 -10.5 -3.44047 | overlap 2500727 2500751 TATTTGCTCGGCTTG TCGTGCGCA CTTTTACC TGCGCACGA GTTTTATTGCTCGTT MADE_02316 2502582 - 2500783 - | Acyl-CoA dehydrogenase TERM 2611 2501294 - 2501282 - G 72 -9.1 -3.54447 | overlap 2501280 TACATGGTACAAATA CGCGT ATC ACGCG CTAGCTGCTCCATGC MADE_02317 2503773 - 2502592 - | acetyl-CoA acetyltransferase TERM 2612 2503381 - 2503396 + g 72 -6.2 -4.31397 | overlap 2503377 AGGGTCAACGGCACG GAACAT ATTC ATGTTC TTGTTTTGTACCAGT TERM 2613 2503844 - 2503892 + r 79 -4.9 -5.02074 | gap 3, opp_overlap 2503861, overlap 2503849 2503852 2503854 2503855 ATTTCACGTTTTCTT TAGTG-TGCGTAA--CGTAAGCCG CTAA CGGCTTACGCCTTACTCATTACTA TTTTTTAAAAACTAG TERM 2614 2503855 - 2503878 + r 76 -11 -2.57404 | opp_overlap 2503861, overlap 2503854 2503852 2503849 2503844 TCTTTAGTGTGCGTA ACGTAAGCCG CTAA CGGCTTACGC CTTACTCATTACTAT MADE_02318 2506036 - 2503904 - | probable trifunctional enoyl-CoA hydratase/delta3-cis-delta2-trans-enoyl-CoA isomerase/3-hydroxyacyl-CoA dehydrogenase oxidoreductase protein TERM 2615 2506139 - 2506150 + H 71 -7.2 -3.95047 | AATAACACGCCCCAA CCCG TTAG CGGG TTCATTTTTGTGTTT MADE_02319 2506276 - 2507196 + | haloalkane dehalogenase MADE_02320 2507209 - 2507973 + | Short-chain dehydrogenase/reductase SDR MADE_02321 2508079 - 2507960 - | hypothetical protein TERM 2616 2508123 - 2508086 - H 93 -10.7 -5.09762 | gap 1, overlap 2508087 GGTGAACAAACAAAA CCGATTAAAGAGGCGAGT GCA AC-CGCCTCTGCAATCGA CCCGTCACTGCAAAA TERM 2617 2508122 - 2508087 - H 89 -12 -3.64772 | gap 1, overlap 2508086 GTGAACAAACAAAAC CGATTAAAGAGGCGAGT GCA AC-CGCCTCTGCAATCG ACCCGTCACTGCAAA TERM 2618 2508375 - 2508363 - g 78 -5.5 -4.74103 | opp_overlap 2508363 TCCTCAACGCAAAAA GCCAT CGA ACGGC TTGTTTCTCATTCAT MADE_02322 2508151 - 2508426 + | hypothetical protein MADE_02323 2508886 - 2508521 - | hypothetical protein TERM 2619 2509376 - 2509361 - g 75 -3.2 -5.1675 | CGATTTATTAAAAAA TGGCTT AACC ATGCCA CCACCTGCAGATGCA MADE_02324 2509020 - 2510840 + | zinc-dependent metallopeptidase TERM 2620 2510914 - 2510883 - f 80 -10.2 -3.76402 | opp_overlap 2510890, overlap 2510887 2510889 2510890 AGCGTACTGAGTAAA TAAATATGCCCCGA ATGT TCGGGGCTTTTTTA TACAATTTAAACTTT TERM 2621 2510910 - 2510887 - f 79 -6.6 -4.50627 | opp_overlap 2510890, overlap 2510883 2510889 2510890 TACTGAGTAAATAAA TATGCCCCGA ATGT TCGGGGCTTT TTTATACAATTTAAA TERM 2622 2510908 - 2510889 - f 79 -9.2 -3.85603 | opp_overlap 2510890, overlap 2510887 2510883 2510890 CTGAGTAAATAAATA TGCCCCGA ATGT TCGGGGCT TTTTTATACAATTTA TERM 2623 2510890 - 2510907 + F 100 -12.7 -5.28826 | opp_overlap 2510889 2510887 2510883 2510890 TGAGTAAATAAATAT GCCCCGA ATGT TCGGGGC TTTTTTATACAATTT TERM 2624 2510907 - 2510890 - f 83 -12.7 -2.90639 | opp_overlap 2510890, overlap 2510889 2510887 2510883 TGAGTAAATAAATAT GCCCCGA ATGT TCGGGGC TTTTTTATACAATTT MADE_02325 2511105 - 2513954 + | GGDEF domain protein MADE_02326 2514172 - 2514804 + | hypothetical protein TERM 2625 2514952 - 2514919 - T 72 -4.5 -4.73448 | gap 1, opp_overlap 2514919 AGAGATAGTTAAAAA GCCCTTTTGCTTAGTG TTT CGC-ATGCAACAGGGC TTTTTATTTGTGGTT TERM 2626 2514919 - 2514952 + T 93 -6.7 -5.4182 | gap 1, opp_overlap 2514919 AGAGATAGTTAAAAA GCCCTTTTGCTTAGTG TTT CGC-ATGCAACAGGGC TTTTTATTTGTGGTT MADE_02327 2515573 - 2515004 - | Pyridoxamine 5-phosphate oxidase-related, FMN-binding protein TERM 2627 2515518 - 2515530 + g 80 -6.3 -4.89339 | TCAGGTACGCTACGG GTTTG ATG CAAAC TTTTTGTCAGTCCTT MADE_02328 2516373 - 2515582 - | putative metallo-dependent hydrolase MADE_02329 2517321 - 2516434 - | DNA polymerase III subunit delta MADE_02330 2517989 - 2517321 - | thymidylate kinase MADE_02331 2519006 - 2518056 - | hypothetical protein MADE_02332 2520016 - 2519168 - | 4-amino-4-deoxychorismate lyase TERM 2628 2520134 - 2520118 - R 100 -9.4 -5.60993 | opp_overlap 2520118 GCCGGTACAAAAAAA GGCAGC GAGTT GCTGCC TTTATATTTGAAATT TERM 2629 2520118 - 2520134 + r 90 -10.1 -4.3453 | opp_overlap 2520118 GCCGGTACAAAAAAA GGCAGCG AGT TGCTGCC TTTATATTTGAAATT MADE_02333 2521374 - 2520172 - | 3-oxoacyl-(acyl-carrier-protein) synthase II MADE_02334 2522164 - 2521352 - | fatty acid/phospholipid synthesis protein TERM 2630 2521453 - 2521471 + g 93 -10.3 -4.4727 | opp_overlap 2521453 TAGGAGATACAAAAA CGGCTCT GTAGA AGAGCCG TTTTGTCGCTATTAA TERM 2631 2521471 - 2521453 - G 100 -10.3 -5.05601 | opp_overlap 2521453 TAGGAGATACAAAAA CGGCTCT GTAGA AGAGCCG TTTTGTCGCTATTAA TERM 2632 2522162 - 2522142 - G 70 -8.9 -3.39897 | opp_overlap 2522141, overlap 2522140 2522134 GCAGAAAGGATAACA GGGGGACCA TGA TCGCCCCCC ATGATATCTAACGCG MADE_02335 2522380 - 2522210 - | 50S ribosomal protein L32 MADE_02336 2523046 - 2522384 - | hypothetical protein MADE_02337 2523114 - 2523692 + | maf protein, putative TERM 2633 2523682 - 2523703 + T 76 -4.3 -5.07652 | opp_overlap 2523684 2523693 2523697 2523698, overlap 2523684 2523697 2523699 ACTTGCTGGCCATAG CAGCGCAAT AAGC AATGCGCCG TTTTATTTTAAAACA MADE_02338 2524415 - 2523711 - | putative phosphoglycolate phosphatase, contains a phosphatase-like domain MADE_02339 2525364 - 2524423 - | ribosomal large subunit pseudouridine synthase C (pseudouridylate synthase) (uracil hydrolyase MADE_02340 2525419 - 2525550 + | hypothetical protein MADE_02341 2525592 - 2525711 + | hypothetical protein TERM 2634 2527253 - 2527237 - g 73 -8 -4.19238 | GCGTGAAGTTGAAAA CCGCAT GAAAG ATGCGG TAAGAAGCGACAGAG TERM 2635 2527489 - 2527459 - g 72 -2.8 -4.96388 | gap 2, overlap 2527464 AAGTATTAAAGAAAA TACAGGGCAAATTG AAGCG CAATT-G-CCTGTA CCCGTAGCAACCTAC TERM 2636 2527956 - 2527942 - g 75 -10 -3.63515 | TCGCAGCCGCAATAA CGACGA CCG TCGTCG TAAGCCACGCAATAA TERM 2637 2528631 - 2528609 - g 100 -12 -4.66264 | opp_overlap 2528607, overlap 2528599 GAAAACGGGCAAAAA CGCGAAGGAC GTG GTCGTTCGCG CCGTTCTCCTCGTCA MADE_02342 2526167 - 2529562 + | RNase E TERM 2638 2529575 - 2529593 + F 83 -11.8 -3.20901 | TAGCTAACCCGTTTA CGCTAACA GTT TGTTAGCG TTCAATTAGTAAAAT TERM 2639 2529618 - 2529633 + F 93 -10.4 -4.88407 | opp_overlap 2529618 TAAAATGCATTAAAA GCCGCT TTCG AGCGGC TTTTTCATTAGCTAA TERM 2640 2529633 - 2529618 - f 90 -10.4 -4.34771 | opp_overlap 2529618 TAAAATGCATTAAAA GCCGCT TTCG AGCGGC TTTTTCATTAGCTAA TERM 2641 2530313 - 2530295 - g 95 -11.8 -4.11048 | ACAAGAGAAGAAGAA TATCAGGC AAT GCCTGATA GCCGACTTAAGCAAA TERM 2642 2530391 - 2530411 + G 72 -8.4 -3.73224 | GTAATTCACGGCGAT GCAAAAGT AGCGA ACTTTTGC TTTACTCCAGACTAC MADE_02343 2529695 - 2530789 + | hypothetical protein MADE_02344 2530989 - 2531360 + | Cryptic haloacid dehalogenase 1 TERM 2643 2531424 - 2531403 - T 73 -7.2 -4.0641 | opp_overlap 2531402 2531403 GTCTAGCTAGATAAA GCCAGGGG TTTATG CCCCTGCC CTTTTCATATCAATA MADE_02345 2531867 - 2531412 - | elaA protein MADE_02346 2532009 - 2531869 - | hypothetical protein TERM 2644 2533005 - 2532989 - g 72 -9.4 -3.53091 | overlap 2533001 AGTCGTTTGCTTAAA CCCGCT AAAAG AGCGGG GGCTAGAAAAGTTCC TERM 2645 2533374 - 2533345 - g 73 -11.5 -2.74019 | GAGAACGGGTAATCA TGTGCTGGGCTAT GGGA ATTACCCAGCACA AACACTCTGTTGCTA MADE_02347 2532252 - 2534591 + | putative formate dehydrogenase oxidoreductase protein MADE_02348 2534649 - 2534762 + | hypothetical protein MADE_02349 2535955 - 2535320 - | molybdopterin guanine dinucleotide synthase TERM 2646 2535592 - 2535572 - G 70 -2.5 -4.92239 | overlap 2535573 GTAAAAAGGCAAAAA GCGGTTTTT CAC ATAAACCGA CCGCTGGGCTTCCCG MADE_02350 2536856 - 2536047 - | putative zinc metalloendopeptidase MADE_02351 2537772 - 2537221 - | nucleoprotein/polynucleotide-associated enzyme TERM 2647 2537849 - 2537872 + r 100 -14 -5.47399 | opp_overlap 2537849 2537852 ATATTCAAGAAGTAA TAAGCCCGAA TAAA TTCGGGCTTA TTTTTTTACGCTTCA TERM 2648 2537872 - 2537849 - R 95 -14 -3.55304 | opp_overlap 2537849, overlap 2537852 ATATTCAAGAAGTAA TAAGCCCGAA TAAA TTCGGGCTTA TTTTTTTACGCTTCA TERM 2649 2537869 - 2537852 - R 90 -11.3 -3.89957 | opp_overlap 2537849, overlap 2537849 TTCAAGAAGTAATAA GCCCGAA TAAA TTCGGGC TTATTTTTTTACGCT MADE_02352 2540569 - 2537909 - | DNA topoisomerase I TERM 2650 2538131 - 2538111 - G 79 -9.9 -3.66784 | opp_overlap 2538111 2538113 2538116, overlap 2538116 GCATCTGCAAGATAA TAGAATTTC GGC GAAATTCTA TCTCTAAAGCGTGCC TERM 2651 2539393 - 2539381 - G 72 -9.1 -3.6288 | AAATCAACTCGTAAA GACGC TGA GCGTC ACGTTCCATATCACC TERM 2652 2540238 - 2540254 + g 70 -2.2 -5.07053 | GCGAGATAAATGGTG TCAGCG TCTTT CGCTAA TTTTTTAAGCTCGTT MADE_02353 2540895 - 2540713 - | hypothetical protein MADE_02354 2540967 - 2542307 + | Succinylarginine dihydrolase TERM 2653 2542346 - 2542321 - T 95 -14.1 -3.26834 | opp_overlap 2542321 AAATGATATTAGTAA GCCCGTTACTC GAGA GAATAACGGGC TTTTTTTATTTCCGA TERM 2654 2542321 - 2542346 + T 100 -11.9 -5.95539 | opp_overlap 2542321 AAATGATATTAGTAA GCCCGTTACTC GAGA GAATAACGGGC TTTTTTTATTTCCGA MADE_02355 2544900 - 2542363 - | invasin domain protein MADE_02356 2545015 - 2546361 + | putative proton/glutamate symporter TERM 2655 2546410 - 2546392 - T 100 -14.6 -3.38832 | opp_overlap 2546392, overlap 2546387 TATCAATAAACGTAA GGCCAGCA TAC TGCTGGCC TTTTTGTTGATGGCT TERM 2656 2546392 - 2546410 + T 100 -14.6 -5.14163 | opp_overlap 2546387 2546392 TATCAATAAACGTAA GGCCAGCA TAC TGCTGGCC TTTTTGTTGATGGCT TERM 2657 2546554 - 2546572 + T 71 -5.2 -4.57073 | overlap 2546555 AATGCAGCGCTGATG ACGGCGAA ATA TTCGCTGC TTTTTGCGCGGGATA TERM 2658 2546555 - 2546571 + T 70 -8.7 -3.33922 | overlap 2546554 ATGCAGCGCTGATGA CGGCGAA ATA TTCGCTG CTTTTTGCGCGGGAT MADE_02357 2547763 - 2546537 - | ABC transporter integral membrane subunit MADE_02358 2548478 - 2547750 - | ABC transporter ATP-binding subunit TERM 2659 2548686 - 2548670 - g 75 -6.5 -4.5442 | overlap 2548672 CGTTGAACTAGAAAA CGGTCAC GTA GTGACTG CACACATCTCTGGTA MADE_02359 2548587 - 2548805 + | translation initiation factor IF-1 TERM 2660 2548853 - 2548837 - T 100 -12.3 -5.66684 | opp_overlap 2548837 TAACGCATAAAAAAA GCCCGAT ATA ATCGGGC TTTTTCATATCTGTT TERM 2661 2548837 - 2548853 + T 100 -12.3 -4.87037 | opp_overlap 2548837 TAACGCATAAAAAAA GCCCGAT ATA ATCGGGC TTTTTCATATCTGTT MADE_02360 2550056 - 2548986 - | ATP-dependent specificity subunit of clpA-clpP serine protease TERM 2662 2549898 - 2549882 - G 72 -5.1 -4.56597 | TGTCTTGGCCAAAAA CAACCAT TTT AAGGTTG CGACCTAGGTTCTTA MADE_02361 2550555 - 2550091 - | ATP-dependent Clp protease, ATP-binding subunit ClpA MADE_02362 2551262 - 2550558 - | ATP-dependent Clp protease, ATP-binding subunit ClpA MADE_02363 2551607 - 2551287 - | ATP-dependent Clp protease adaptor protein ClpS TERM 2663 2551534 - 2551562 + g 93 -6.6 -5.67529 | gap 1 ACTTTATACATGGGA GGCG-GCTGCGGC TTTT GTCGCTGCGCGTC TTTTTGTTTTTCCTT MADE_02364 2551849 - 2552067 + | stress response protein CspD MADE_02365 2552145 - 2552023 - | hypothetical protein TERM 2664 2552085 - 2552104 + g 93 -9.3 -4.82678 | opp_overlap 2552085, overlap 2552078 2552102 AAAAGAATTTATAAA GCCTGAC CTTGCC GTCAGGC TTTTGCTTTTTATGC TERM 2665 2552104 - 2552085 - G 79 -9.3 -4.04764 | opp_overlap 2552078 2552085 2552102 AAAAGAATTTATAAA GCCTGAC CTTGCC GTCAGGC TTTTGCTTTTTATGC TERM 2666 2552520 - 2552497 - R 100 -14.6 -5.81032 | opp_overlap 2552497 GAAGGTTAAAAAAAA GCCCGCTCAC TTCA GTGAACGGGC TTTTTAATGTTCATA TERM 2667 2552497 - 2552520 + r 100 -12.4 -4.89233 | opp_overlap 2552497 GAAGGTTAAAAAAAA GCCCGCTCAC TTCA GTGAACGGGC TTTTTAATGTTCATA MADE_02366 2554823 - 2552604 - | isocitrate dehydrogenase, NADP-dependent TERM 2668 2554842 - 2554857 + H 74 -9 -3.48105 | ATACCTCAATTTTCT CGACAG GGTA CTGTCG TCTTTAGTCCATTAG MADE_02367 2555335 - 2555877 + | ribosomal large subunit pseudouridine synthase E TERM 2669 2557134 - 2557150 + G 71 -9.5 -3.14132 | overlap 2557112 GTGCCGACCACCCTC GCCTTTA CTC TAAAGGC TTGGTAGCAAAACAG TERM 2670 2557317 - 2557306 - g 77 -7.2 -4.43844 | opp_overlap 2557316 TGATGAGCCACAAAA GGCG GTAA CGCC GGGGCAATCTGCGGT MADE_02368 2556281 - 2557390 + | tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase MADE_02369 2557390 - 2558016 + | hypothetical protein TERM 2671 2558535 - 2558518 - g 76 -7.7 -4.2679 | TAAGCGCTATCAAAA CGTACCA ATGA TGGCACG TACCCACGGTCAGCC MADE_02370 2558030 - 2559397 + | adenylosuccinate lyase MADE_02371 2559537 - 2559388 - | hypothetical protein TERM 2672 2559425 - 2559444 + g 100 -8.6 -5.61596 | gap 1, opp_overlap 2559425 TCCATTACACTAAAA CGCGGTCGT AAA AC-ACCGCG TTTTTTTATGCCAGT TERM 2673 2559444 - 2559425 - G 79 -8.6 -4.371 | gap 1, opp_overlap 2559425 TCCATTACACTAAAA CGCGGTCGT AAA AC-ACCGCG TTTTTTTATGCCAGT TERM 2674 2559741 - 2559714 - g 73 -4.1 -4.74801 | opp_overlap 2559714 2559713 2559718, overlap 2559702 2559719 TAACCCCACTAAAAA CTAATGGCGAT CAATAT ATCGCCGTTGG GTTTTCGGCTCATCC MADE_02372 2559539 - 2560192 + | adenylate/guanylate cyclase MADE_02373 2560365 - 2561531 + | putative enzyme with RmlC-like domain TERM 2675 2561982 - 2561952 - g 83 -9.6 -4.10657 | overlap 2561953 CGACAGCGTTTAAAA TGCCCGGCAGAGCG ATT CCCTCTGCCAGACG TAACCCAATTGCATT TERM 2676 2561981 - 2561953 - g 82 -13.1 -3.06073 | overlap 2561952 GACAGCGTTTAAAAT GCCCGGCAGAGCG ATT CCCTCTGCCAGAC GTAACCCAATTGCAT MADE_02374 2561541 - 2561999 + | putative Glr3403 protein MADE_02375 2562432 - 2562016 - | hypothetical protein MADE_02376 2562593 - 2562453 - | hypothetical protein TERM 2677 2562919 - 2562908 - g 73 -2.2 -5.15381 | AATACAGTCAAAAAA CCAT GACC ACGG GGGCGCGAAAAATCG MADE_02377 2562751 - 2562966 + | integral membrane protein TerC MADE_02378 2563331 - 2563837 + | Ferredoxin/oxidoreductase MADE_02379 2563834 - 2566095 + | Twin-arginine translocation pathway signal TERM 2678 2566137 - 2566190 + T 93 -14.1 -2.68279 | opp_overlap 2566152, overlap 2566152 TTATTTCGGTATTGA TGCAGACAGAAAAAAGGGTAATCAC TGAA GTGATTACCCTTTTTTATAACTGCC TACGTTTAATAGCTA TERM 2679 2566175 - 2566152 - T 100 -14 -5.4251 | opp_overlap 2566137 2566152 TGCAGACAGAAAAAA GGGTAATCAC TGAA GTGATTACCC TTTTTTATAACTGCC TERM 2680 2566152 - 2566175 + T 100 -14 -5.28176 | opp_overlap 2566152, overlap 2566137 TGCAGACAGAAAAAA GGGTAATCAC TGAA GTGATTACCC TTTTTTATAACTGCC MADE_02380 2567495 - 2566458 - | ISCps1, transposase TERM 2681 2567557 - 2567539 - R 72 -8.8 -3.57572 | opp_overlap 2567553, overlap 2567536 GAACTAAAATATTAA CCCAGCTC ACT GAGTTGGG GGAGTCCAATTATCT MADE_02381 2568190 - 2568041 - | hypothetical protein TERM 2682 2568427 - 2568403 - R 100 -15.1 -5.84011 | opp_overlap 2568403 AACAAAAAAGAAAAA TGCCAGTCAGC TTA ACTGACTGGCA TTAATCGAAAGGTCT TERM 2683 2568403 - 2568427 + r 95 -14.4 -3.14683 | opp_overlap 2568403 AACAAAAAAGAAAAA TGCCAGTCAG CTTAA CTGACTGGCA TTAATCGAAAGGTCT MADE_02382 2570888 - 2568516 - | phosphoenolpyruvate synthase TERM 2684 2569541 - 2569557 + g 79 -2.9 -5.34555 | opp_overlap 2569541 CCTCTGCACAAGAAA CGGTAAT CTT GTCACCG TTTTTTATACTGTCA TERM 2685 2571337 - 2571350 + G 76 -2.3 -5.27923 | overlap 2571338 TTTTCAAGACACCGG AGAGC GGCC GCTCG TTTTTTATACAATTG MADE_02383 2571161 - 2571973 + | hypothetical protein TERM 2686 2571989 - 2572028 + T 76 -10.8 -2.67316 | opp_overlap 2571989 2571988 2571986, overlap 2571987 2572019 GCCAACCCTAAACAG CTCGTCTCACCAAGTTCT TCTT AGGATTTGGTGAGACACG TCACTTATTGGCTTA MADE_02384 2572260 - 2572048 - | hypothetical protein TERM 2687 2572463 - 2572490 + r 100 -14.2 -4.23647 | opp_overlap 2572464, overlap 2572464 GCTTTGGATAAAAAA AGGGCCTGGTTA AGAT TAACCAGGCCCC TTTATTCAATGATTT TERM 2688 2572489 - 2572464 - R 100 -17.7 -5.60993 | opp_overlap 2572463 2572464 CTTTGGATAAAAAAA GGGCCTGGTTA AGAT TAACCAGGCCC CTTTATTCAATGATT TERM 2689 2572464 - 2572489 + r 100 -17.7 -3.13104 | opp_overlap 2572464, overlap 2572463 CTTTGGATAAAAAAA GGGCCTGGTTA AGAT TAACCAGGCCC CTTTATTCAATGATT MADE_02385 2574488 - 2572530 - | TPR domain protein TERM 2690 2574583 - 2574603 + r 90 -12.6 -3.60818 | opp_overlap 2574583 CATTAGTAATGAAAA CGGCAGAC GTAAA GTCTGCCG TTTAAACGCTTTTAC TERM 2691 2574603 - 2574583 - R 100 -12.6 -4.46615 | opp_overlap 2574583 CATTAGTAATGAAAA CGGCAGAC GTAAA GTCTGCCG TTTAAACGCTTTTAC MADE_02386 2577313 - 2574653 - | TonB-dependent receptor TERM 2692 2577339 - 2577329 - R 71 -4 -4.87803 | TATGTCGAAATAAAA TTCA AAC TGAA CAAATTAGCGACGCT MADE_02387 2578876 - 2577380 - | hypothetical protein MADE_02388 2579670 - 2578951 - | DNA polymerase III, epsilon subunit TERM 2693 2579396 - 2579424 + g 75 -6.6 -4.42788 | opp_overlap 2579383 2579396 AACCCGACGTCAAAC GGGGCGTTGTGA ATAAC TAACTGCGCCCC TTTTATAAAGTTCAC MADE_02389 2579768 - 2580238 + | ribonuclease HI TERM 2694 2580303 - 2580276 - T 72 -9.1 -3.39856 | opp_overlap 2580275 2580279, overlap 2580277 TACATAGGCAATGAA CTGGGCGCGCA ACGCGA TGCGCGCCTAA CTTAATCGCTCTACC TERM 2695 2580302 - 2580277 - T 72 -10.4 -2.63432 | opp_overlap 2580275 2580279, overlap 2580276 ACATAGGCAATGAAC TGGGCGCGCA ACGCGA TGCGCGCCTA ACTTAATCGCTCTAC TERM 2696 2580279 - 2580300 + T 90 -13 -2.57423 | opp_overlap 2580277 2580276, overlap 2580275 ATAGGCAATGAACTG GGCGCGCA ACGCGA TGCGCGCC TAACTTAATCGCTCT MADE_02390 2581291 - 2580314 - | oxidoreductase, zinc-binding dehydrogenase family protein TERM 2697 2581664 - 2581653 - g 70 -2.2 -5.03314 | TGGACGTTCAAAAAA GACG AGAG CATC GACAATGGCTTTTTC MADE_02391 2581443 - 2582636 + | putative methyltransferase with S-adenosyl-L-methionine-dependent methyltransferase activity and a PUA domain TERM 2698 2582680 - 2582642 - T 100 -13.3 -4.44245 | opp_overlap 2582642 2582648, overlap 2582648 AGACGACTGACAAAA TCAAAAGCGCCTGTGTG AATGA CATACAGGCGCTTTTTA GTATTTATTTAAAGA TERM 2699 2582642 - 2582680 + T 95 -15.5 -2.88452 | opp_overlap 2582642 2582648, overlap 2582648 AGACGACTGACAAAA TCAAAAGCGCCTGTGTG AATGA CATACAGGCGCTTTTTA GTATTTATTTAAAGA TERM 2700 2582648 - 2582674 + T 100 -14.5 -4.97461 | opp_overlap 2582648 2582642, overlap 2582642 CTGACAAAATCAAAA GCGCCTGTGTG AATGA CATACAGGCGC TTTTTAGTATTTATT TERM 2701 2582674 - 2582648 - T 100 -12.3 -4.73108 | opp_overlap 2582642 2582648, overlap 2582642 CTGACAAAATCAAAA GCGCCTGTGTG AATGA CATACAGGCGC TTTTTAGTATTTATT MADE_02392 2582986 - 2582735 - | membrane protein-like protein TERM 2702 2582876 - 2582858 - G 70 -5.3 -4.4078 | TTCGTGGAAGTAAAA CGCAACA GTATT TATTGCG GGTTCTACAAGTGCC MADE_02393 2583457 - 2583257 - | membrane protein-like protein MADE_02394 2587737 - 2583781 - | helicase, ATP-dependent TERM 2703 2584151 - 2584161 + g 74 -6.8 -4.20288 | overlap 2584146 TTGATCATGGTTAAT GGCA CAT TGCC TTTCATTTGCTTTTG TERM 2704 2585773 - 2585743 - G 72 -2.6 -4.93696 | gap 1, opp_overlap 2585753, overlap 2585737 2585734 TGGAAAGATTAAAAA GCGAGAGT-TACG CGACCC CATATACTCGCGC TCTTTATCTTTAAAG TERM 2705 2587880 - 2587848 - R 84 -7.8 -4.81163 | gap 1 TAAACATCAATAAAA TTCGGGCGGTGATCC TAGA AGAT-ACCGCCCTAA AAAGCTAGCGTTGTA MADE_02395 2589181 - 2587910 - | NA+/H+ antiporter NHAC TERM 2706 2589132 - 2589116 - G 79 -2.9 -5.28778 | opp_overlap 2589128 AGCACTGATAAAAAA TGCCACT AAT ATCGGCA TTGCAGTTATATCGT MADE_02396 2590883 - 2589531 - | transcriptional regulator, AraC family protein TERM 2707 2589886 - 2589875 - G 71 -7.2 -4.09243 | GATAGCGTTCGAAAA GGCG ATAC CGCC CTAACTCTTTGTCAG MADE_02397 2591843 - 2590932 - | GGDEF domain protein TERM 2708 2591756 - 2591719 - G 72 -10.7 -2.9348 | TCTAAACCCGATATA TCAGCGCTTTGTTTTGG GTTA CCTAAAAAAAGCGCTAA AGATATGGCAATTGC MADE_02398 2592285 - 2594990 + | putative tonB-dependent receptor MADE_02399 2595133 - 2595014 - | hypothetical protein TERM 2709 2595415 - 2595436 + GH 72 -5.2 -4.56597 | AGCTAGATGCTGAAT TTATCGCT ACCACA GGCGATAA TTTTTACGACAACGG MADE_02400 2595132 - 2596178 + | putative acid phosphatase MADE_02401 2596193 - 2598409 + | putative phytase domain protein TERM 2710 2598480 - 2598426 - T 73 -8.1 -3.94409 | opp_overlap 2598444 2598448, overlap 2598434 2598444 TAGACTAGTTATAAA CCCATTAA-GCGTTGAAAAGGAGGGGG TAA CCCCTTTCCTTTCAACGCGTTAA-GAA AGGCTTTTATCCTGC TERM 2711 2598472 - 2598434 - T 100 -16.8 -3.26546 | opp_overlap 2598444 2598448, overlap 2598426 2598444 TTATAAACCCATTAA GCGTTGAAAAGGAGGGGG TAA CCCCTTTCCTTTCAACGC GTTAAGAAAGGCTTT TERM 2712 2598448 - 2598458 + T 75 -8.2 -4.05788 | opp_overlap 2598444 2598434 2598426, overlap 2598444 AGCGTTGAAAAGGAG GGGG TAA CCCC TTTCCTTTCAACGCG MADE_02402 2598933 - 2598487 - | CBS domain protein MADE_02403 2600114 - 2599071 - | Asparaginase family protein MADE_02404 2603944 - 2600234 - | putative sensor protein TERM 2713 2601706 - 2601720 + g 76 -4.2 -5.08824 | CGCGCTCAAGTGACG CTTCGG TAT CTGGAG TTTTTTCAGTAAGCG TERM 2714 2604130 - 2604145 + H 70 -9 -3.2655 | overlap 2604123 TGGTATTGTATTTTA CGCAGT GTAC ACTGCG TTCAATATTTCATTG TERM 2715 2604395 - 2604383 - g 73 -7.7 -4.16016 | TCACGCCTCAACAAA CCATC AGA GATGG CTCAAACGAAGCTGA MADE_02405 2604172 - 2605608 + | exodeoxyribonuclease I TERM 2716 2605993 - 2605974 - g 71 -3.5 -4.74103 | opp_overlap 2605974, overlap 2605976 TGGCGAACGTAAAAA CGCGGAA GTAGAA TTCCGTG TTCCTGATGACGGCA TERM 2717 2606421 - 2606401 - g 76 -7.6 -4.32607 | gap 1 GTAAAAGGCAATAAA CTC-CCTGC CGTC GCAGGCGAG TGGGTCGACTTTAAA MADE_02406 2605735 - 2607390 + | hypothetical protein MADE_02407 2609100 - 2607589 - | GGDEF domain protein MADE_02408 2610360 - 2609125 - | Kynureninase TERM 2718 2609602 - 2609588 - G 82 -5.6 -5.1417 | GGAGAAAATGAAAAA GGGGCA CTG TGTCCC ATCCATCCAGACAGG MADE_02409 2611492 - 2610353 - | putative lipase/esterase TERM 2719 2611550 - 2611518 - R 83 -10.7 -3.64703 | opp_overlap 2611512 2611510 2611520 2611541 TTTCTTTTATTGAAA CACAGAGCAACATTA AAG TGATGTCACTCTGTG ATTAAATCTTTTACA MADE_02410 2612836 - 2611586 - | acetyl-CoA acetyltransferase with thiolase domain MADE_02411 2613059 - 2613514 + | Transcriptional regulator, MerR family protein MADE_02412 2613511 - 2614680 + | isovaleryl-CoA dehydrogenase TERM 2720 2615422 - 2615434 + G 70 -9.1 -3.42346 | opp_overlap 2615421 2615420 TCGGCTAAAAATATT CCGCA AAT TGCGG TTGTAATGGGCTCTT MADE_02413 2614888 - 2616495 + | methylcrotonyl CoA carboxylase, beta subunit TERM 2721 2616834 - 2616854 + G 70 -8.9 -3.406 | opp_overlap 2616825 2616829 2616828 AGAGTACAAGGCGCA GCCTTCGGC GGA GCTGTAGGC TTGATTGCGTGTTGC MADE_02414 2616507 - 2617307 + | Enoyl-CoA hydratase/isomerase TERM 2722 2617406 - 2617379 - g 73 -4 -4.8667 | overlap 2617381 CACAGGGCATAAAAA CCGTCGCCGTAT ACTC AGACGCCGACCG CAACGCACTGCACGT TERM 2723 2617695 - 2617672 - g 71 -3.8 -4.79756 | gap 1, overlap 2617673 CACATAATGGAAAAA GCCGGCGTACC TCT AGTAC-CCGGT TACCATGGCGATGAC TERM 2724 2618092 - 2618060 - g 81 -3.3 -5.37043 | opp_overlap 2618060, overlap 2618062 ATGTTAGAGAAAAAA TGGGTGAGGCTGCAA TTC TTGCAGCCAAAGCAA TCAATTATGTTGGTG TERM 2725 2619257 - 2619267 + G 80 -6.8 -4.63486 | overlap 2619240 TTGACGGTGGGGCAA CGCT TTT AGCG TTTTCTTCGAAAGAT MADE_02415 2617297 - 2619297 + | methylcrotonyl-CoA carboxylase, alpha subunit MADE_02416 2619302 - 2620198 + | hydroxymethylglutaryl-CoA lyase TERM 2726 2620212 - 2620238 + T 84 -8.1 -4.83169 | AATTGATTTTTTTTG GAGCATGCT GCCCTTCCA AGCATGCTC TTTTTATCGAGCCAT MADE_02417 2620501 - 2620361 - | hypothetical protein TERM 2727 2620961 - 2620945 - g 74 -5.8 -4.56358 | opp_overlap 2620945 GATATTGAGATAAAA GCGGTC AAAGA AACCGC TGATATCTACAGGAA MADE_02418 2620585 - 2621571 + | hypothetical protein MADE_02419 2622733 - 2621579 - | permease of the major facilitator superfamily TERM 2728 2622016 - 2622027 + g 70 -2.2 -5.02074 | gap 1, overlap 2622016 TCGGAAGTAACTCTT G-GGC CTC GCCGC TTTTTTCAAGCATGA TERM 2729 2622265 - 2622249 - G 79 -4.3 -5.22006 | GTATTAGAAGAAAAA GCCCCCT CAT AGAGCGC TAAGGGTATAGCTAT MADE_02420 2623343 - 2622810 - | hypothetical protein TERM 2730 2623477 - 2623497 + H 70 -9.1 -3.18681 | TTACGGATGTTCGGC GCATTTTTC ATA GAAGAATGC TTCATGGCCTTGAAC TERM 2731 2623841 - 2623826 - H 89 -9 -4.7373 | opp_overlap 2623825 TTATGTTATCAAAAA GCCTGT TCAA ACAGGC CGTTCATATATAGCG MADE_02421 2623937 - 2625232 + | glucose-1-phosphate adenylyltransferase TERM 2732 2625261 - 2625236 - T 95 -11.9 -4.60255 | overlap 2625237 ATAACCCTCTAAAAA TGATTTGGCGC AACT GCGCCAAATCG TGCCCCACTATGTAT TERM 2733 2625260 - 2625237 - T 100 -15.4 -3.3543 | overlap 2625236 TAACCCTCTAAAAAT GATTTGGCGC AACT GCGCCAAATC GTGCCCCACTATGTA MADE_02422 2626072 - 2625269 - | acyltransferase 3 TERM 2734 2626125 - 2626101 - R 91 -10.1 -4.56367 | TATGTCACAAACAAA TAAGGGGCT TGAAATC AGCCCCTTA GCAATAAAGCACGAT MADE_02423 2627467 - 2626145 - | major facilitator family transporter TERM 2735 2626988 - 2626976 - G 79 -4.1 -5.1287 | TGCAGACGCAAAAAA CGCTA GCA TAACG CCAAAAGGGATACCT TERM 2736 2627017 - 2627032 + g 90 -6.8 -5.27335 | opp_overlap 2627016 2627014 2627017, overlap 2627016 CTAAAGAGTAAATAG CGAGTG CCCC CGCTCG TTTTTCTTTCGGAAA TERM 2737 2628067 - 2628090 + G 72 -8.2 -3.75629 | opp_overlap 2628067 CCGCAAATTCCTAAA GTAACGCCAA AATT TTTGCGTTAC TTTGACTTAGCCATC MADE_02424 2627638 - 2628453 + | putative acyl-CoA thioesterase, TesB family protein TERM 2738 2628468 - 2628489 + T 91 -13.1 -3.14931 | opp_overlap 2628468, overlap 2628473 AACCGGAAGGCTAAA CTGAAGCGT GTAT ACGCTTCAG TTAGTACAACATAAA TERM 2739 2628489 - 2628468 - T 95 -13.1 -3.66921 | opp_overlap 2628468 2628473 AACCGGAAGGCTAAA CTGAAGCGT GTAT ACGCTTCAG TTAGTACAACATAAA MADE_02425 2629335 - 2628490 - | putative signal transduction protein MADE_02426 2629834 - 2631105 + | putative glycosyltransferase MADE_02427 2631534 - 2631142 - | putative selenocysteine lyase TERM 2740 2631307 - 2631294 - G 72 -5.9 -4.4078 | overlap 2631296 CTTTTTCAAGTAAAA CGGCG AGTA CACCG CGTATTACCTTACTT MADE_02428 2631944 - 2631549 - | hypothetical protein TERM 2741 2632195 - 2632209 + G 72 -5.8 -4.46233 | TTATCCATTTTCGAT TTATCA CGA TGATAA TTTATTTAGCGTTAA MADE_02429 2632115 - 2632900 + | hypothetical protein TERM 2742 2632890 - 2632877 - f 71 -6.7 -4.00348 | opp_overlap 2632879 GTTCAATTAACCAAA GCTTC GCAA GAAGC GAATTTATAGCCACC TERM 2743 2633697 - 2633685 - g 75 -6.3 -4.4448 | opp_overlap 2633685 AAACCCTGAAACAAA CGAAA GGT TTTCG TGGTTTGATTATCGC MADE_02430 2633062 - 2633871 + | exodeoxyribonuclease III MADE_02431 2633939 - 2634550 + | hypothetical protein TERM 2744 2634860 - 2634880 + G 86 -4.7 -5.51046 | opp_overlap 2634867, overlap 2634832 ATAGCAAAACTGTTA GTGCAAAGT GCG ATCTTGCAC TTTTTTGTGTGTTTG TERM 2745 2635083 - 2635099 + G 72 -5.1 -4.58395 | overlap 2635085 GTTTGCCAGTGTGGT TGGGGAT CAG GTCCCTA TTTTTGGAGGGTCGA MADE_02432 2634640 - 2635815 + | hypothetical protein TERM 2746 2635907 - 2635893 - g 79 -2.8 -5.27923 | GAAGCGCACAAAAAA GAAAGC GAC GCTTTG TTAGAAGGAACACAG TERM 2747 2637217 - 2637232 + G 83 -10.4 -3.67792 | opp_overlap 2637217 TAGCGCATAAAAAAA CCGCAC AACA GTGCGG TTTCAATACGTCTGG TERM 2748 2637232 - 2637217 - g 100 -10.4 -5.626 | opp_overlap 2637217 TAGCGCATAAAAAAA CCGCAC AACA GTGCGG TTTCAATACGTCTGG MADE_02433 2635812 - 2637260 + | sensor histide kinase MADE_02434 2637772 - 2637272 - | putative hypoxanthine phosphoribosyltransferase MADE_02435 2639328 - 2637913 - | lipoprotein releasing system transmembrane protein LolE MADE_02436 2639503 - 2640102 + | hypothetical protein TERM 2749 2640220 - 2640210 - g 80 -5.4 -5.00616 | CCTGCGCCTAAAAAA GAAG CCG CTTC ACAAGACCACAAGCA TERM 2750 2640911 - 2640899 - g 73 -7.7 -4.08216 | GCAGTTTTTGGAAAA GTTCG ATG CGAAC AACGCGTCAGAAAGC TERM 2751 2643196 - 2643180 - g 72 -9.4 -3.55622 | GTTAATGCCCTTAAA GACGGC AGAGA GCCGTC GCTAGACGATGCGAT MADE_02437 2640165 - 2643662 + | transcription-repair coupling factor MADE_02438 2643664 - 2645193 + | hypothetical protein MADE_02439 2645341 - 2645856 + | putative vitamin B12 related Cobalamin adenosyltransferase TERM 2752 2645841 - 2645868 + T 75 -10 -3.17075 | gap 1, opp_overlap 2645845, overlap 2645845 AGAAGCCGGCGTAGA TGA-AGTACCGGT GTA ACCGGTACTATCG TTCACTTAACCGCGC TERM 2753 2645845 - 2645863 + T 91 -13.2 -2.93991 | opp_overlap 2645845, overlap 2645841 GCCGGCGTAGATGAA GTACCGGT GTA ACCGGTAC TATCGTTCACTTAAC TERM 2754 2645863 - 2645845 - T 91 -13.2 -3.25823 | opp_overlap 2645841 2645845 GCCGGCGTAGATGAA GTACCGGT GTA ACCGGTAC TATCGTTCACTTAAC MADE_02440 2646885 - 2645863 - | beta-hexosaminidase TERM 2755 2646211 - 2646183 - G 83 -9.7 -4.07885 | TATCGTTTTTCAAAA TGGTTTTTAGCCA CGT TGACGAAAAACCA GCCGGCTTGTCACAA TERM 2756 2647322 - 2647296 - g 76 -2.1 -5.29782 | GATATTGACAAAAAA GCGCGGTTCCA CCAGT TCGAGCAGCGC GCAAAAGCCGTATTT TERM 2757 2648155 - 2648170 + G 79 -10.4 -3.5594 | opp_overlap 2648154 2648153 GCTACGCCCTAAATT GGGTGG CCCA CCACCC TTTCGCCGCTAACTT MADE_02441 2646993 - 2649323 + | putative hydrolase TERM 2758 2649405 - 2649383 - g 79 -10.6 -3.55966 | overlap 2649385 GTATTAAAATATGAA CACGATGCCA ATG CGGCATCGTA CGGGCTAGAAGCCGT TERM 2759 2649403 - 2649385 - g 79 -11 -3.34486 | overlap 2649383 ATTAAAATATGAACA CGATGCCA ATG CGGCATCG TACGGGCTAGAAGCC MADE_02442 2649320 - 2649790 + | ybaK/ebsC protein TERM 2760 2649953 - 2649937 - T 77 -6.5 -4.61199 | opp_overlap 2649937 AGTCTATAGAGAAAA GCAGCCC TAA AAGCTGC TTATTTACTCGATTT MADE_02443 2650499 - 2649954 - | hypothetical protein TERM 2761 2650547 - 2650530 - R 79 -5.5 -4.9792 | overlap 2650531 CATTGCATATAAAAA TCAGTGC GAGT GCACTGT AAAAAAGAGGCAATA TERM 2762 2650546 - 2650531 - R 74 -9 -3.58029 | overlap 2650530 ATTGCATATAAAAAT CAGTGC GAGT GCACTG TAAAAAAGAGGCAAT TERM 2763 2650588 - 2650569 - R 100 -12.2 -5.10767 | opp_overlap 2650569 GAGGCAATACAAAAA GAGCGAGA AGCC TCTCGCTC TTTTTCAGTATTGTA TERM 2764 2650569 - 2650588 + r 100 -12.2 -4.76312 | opp_overlap 2650569 GAGGCAATACAAAAA GAGCGAGA AGCC TCTCGCTC TTTTTCAGTATTGTA TERM 2765 2650632 - 2650650 + r 78 -3.8 -5.18355 | overlap 2650633 TATTGGTCGACAGGC TCTGAGTT TTC AACTCGGC TTTTTAGTTTTTGAC MADE_02444 2650915 - 2650616 - | integration host factor alpha subunit MADE_02445 2653306 - 2650919 - | phenylalanyl-tRNA synthetase beta subunit TERM 2766 2650981 - 2650993 + g 71 -7.7 -3.83864 | CAGTATCTACGGCTT GCTGA ATT TCAGC TTCTTCTAAGGTTTT TERM 2767 2652974 - 2652985 + g 72 -5.8 -4.45765 | AAATGACGGCTCACC GCGA AGCT TCGC TTTCTTAATTTTAAA MADE_02446 2654301 - 2653321 - | phenylalanyl-tRNA synthetase alpha subunit TERM 2768 2654734 - 2654702 - g 91 -6.9 -5.47399 | overlap 2654703 CCAAGTTGAAAAAAA CCTCGCTTCGCAGCT AAA AGCAGCGAACAGAGA GTCGCGTAAAGAAAT TERM 2769 2654733 - 2654703 - g 74 -8.2 -3.87355 | overlap 2654702 CAAGTTGAAAAAAAC CTCGCTTCGCAGCT AAA AGCAGCGAACAGAG AGTCGCGTAAAGAAA TERM 2770 2654861 - 2654841 - g 70 -2.5 -5.07107 | opp_overlap 2654845 2654855 2654855, overlap 2654845 2654855 GAAAGTCGCAAAAAA GTAAGCCAT AGA ATGGCTTTT ATAAAGCGCTTTCTT TERM 2771 2654857 - 2654845 - g 71 -7.7 -3.93166 | opp_overlap 2654845 2654855 2654855, overlap 2654841 2654855 GTCGCAAAAAAGTAA GCCAT AGA ATGGC TTTTATAAAGCGCTT TERM 2772 2654845 - 2654857 + G 79 -7.7 -4.37658 | opp_overlap 2654841 2654845 2654855, overlap 2654855 2654855 GTCGCAAAAAAGTAA GCCAT AGA ATGGC TTTTATAAAGCGCTT MADE_02447 2654628 - 2655461 + | phenylalanyl-tRNA synthetase alpha subunit MADE_02448 2656957 - 2655812 - | glycosyl transferase, group 1 TERM 2773 2657091 - 2657101 + H 85 -5.4 -5.2166 | ATTTATTAAGCATAT GCAA TCT TTGC TTTTTTAAATTGTTA MADE_02449 2657126 - 2658256 + | Glycosyl transferase group 1 MADE_02450 2658728 - 2659546 + | hypothetical protein MADE_02451 2660223 - 2660035 - | phenylalanyl-tRNA synthetase alpha subunit MADE_02452 2660422 - 2662341 + | putative lipopolysaccharide modification acyltransferase MADE_02453 2662945 - 2663925 + | IS5 transposase TERM 2774 2663944 - 2663928 - f 77 -9.4 -3.54307 | opp_overlap 2663927, overlap 2663938 AAGATCTGTCTGAAA TCCGGG AATAG CCCGGA ATTAGGTCGAAATCC MADE_02454 2664078 - 2664692 + | acyltransferase 3 MADE_02455 2665147 - 2665893 + | glycosyltransferase TERM 2775 2666127 - 2666117 - g 81 -8.2 -4.4959 | CCTAATCAAGCAAAA CGCC AAT GGCG TACCAGACCCGATCC TERM 2776 2666200 - 2666215 + G 77 -9 -3.8381 | opp_overlap 2666199 ACAAGATGAATTGAT TACGCC GGTA GGCGTA TTTGATCATCTATGT TERM 2777 2666926 - 2666908 - g 77 -10.2 -3.42482 | overlap 2666906 2666909 TTACTCAATAGAATA TGTGCGCG TCT CGCGCACC AGCACTATCAATGTT TERM 2778 2666925 - 2666909 - g 83 -13.7 -2.65007 | overlap 2666908 2666906 TACTCAATAGAATAT GTGCGCG TCT CGCGCAC CAGCACTATCAATGT MADE_02456 2665964 - 2667457 + | putative orphan protein; putative transposase MADE_02457 2667477 - 2668199 + | putative transposase MADE_02458 2669576 - 2668479 - | Glycosyl transferase, group 1 TERM 2779 2669550 - 2669538 - G 83 -9.1 -4.25104 | GCCGCTTGATGAAAA CCCTG CCT CAGGG TGAATAACGGCTACT MADE_02459 2669988 - 2669854 - | hypothetical protein MADE_02460 2669990 - 2672377 + | hypothetical protein TERM 2780 2673220 - 2673236 + G 79 -2.9 -5.34365 | overlap 2673222 ATCTTTAGTAAGCGT TTCTGCT CCG GGCAGTA TTTTTATTCTTATGA MADE_02461 2672588 - 2673289 + | hypothetical protein TERM 2781 2673340 - 2673318 - f 93 -10.6 -5.1101 | opp_overlap 2673319, overlap 2673319 TCATCATTTAAAAAA GGGCCCTTTT AAT AAAAGGGCCT TTTTTTTGCATTGCT TERM 2782 2673339 - 2673319 - f 100 -14.1 -3.65883 | opp_overlap 2673319, overlap 2673318 CATCATTTAAAAAAG GGCCCTTTT AAT AAAAGGGCC TTTTTTTTGCATTGC TERM 2783 2673319 - 2673339 + F 100 -14.1 -5.86332 | opp_overlap 2673318 2673319 CATCATTTAAAAAAG GGCCCTTTT AAT AAAAGGGCC TTTTTTTTGCATTGC MADE_02462 2673456 - 2674202 + | hypothetical protein MADE_02463 2674409 - 2675668 + | putative glycosyl transferase in colanic acid gene cluster TERM 2784 2675725 - 2675685 - T 82 -7.8 -4.56597 | gap 1, opp_overlap 2675681 CTTTTTCCTGAAAAA TTCTAAGCTGACAGTTATT GTTT AGTAGCTGTCAGCTT-GAA CTAATAATTCATTGA MADE_02464 2677287 - 2675821 - | probable polysaccharide transport protein TERM 2785 2677158 - 2677147 - G 70 -2.2 -5.05606 | overlap 2677153 CTCAACAAAAAGAAA GCAA AAGC CTGC TAGGCCAAACTCTTC TERM 2786 2677163 - 2677153 - G 82 -6.8 -4.78512 | overlap 2677147 AAAAAGAAAGCAAAA GCCT GCT AGGC CAAACTCTTCTAATG TERM 2787 2677255 - 2677269 + g 88 -5.7 -5.5112 | TAATGATATCCATAT GCTAC CTCTC GTAGC TTTTTTCTTAATAGA MADE_02465 2678285 - 2677356 - | dolichyl-phosphate mannose synthase related protein MADE_02466 2679508 - 2678648 - | glycosyl transferase TERM 2788 2679392 - 2679415 + g 84 -8.2 -4.66057 | opp_overlap 2679395, overlap 2679395 GTATGAAATTTCAGA GCAGTCATTG ACGA CAATGACTTC TTTTGGTTTATATGT TERM 2789 2679395 - 2679412 + g 81 -8.5 -4.40882 | opp_overlap 2679395, overlap 2679392 TGAAATTTCAGAGCA GTCATTG ACGA CAATGAC TTCTTTTGGTTTATA MADE_02467 2680650 - 2679553 - | glycosyltransferase MADE_02468 2681977 - 2680655 - | hypothetical protein TERM 2790 2680954 - 2680942 - G 70 -4.9 -4.48176 | CATAAAAGTAAGAAA CATAA GTG TTATG TGCGTAATGCTTAAA TERM 2791 2681070 - 2681080 + g 74 -5.4 -4.67234 | AAATATACTCTTGAA GACA TAA TGTC TTTTTCAGCTTCAGT MADE_02469 2683119 - 2681980 - | putative glycosyltransferase TERM 2792 2683566 - 2683553 - g 81 -3.8 -5.4505 | TTGCCCAACAAAAAA CGGT TTTCAC ACCG CAAGTTTATGCACGT MADE_02470 2683417 - 2684145 + | periplasmic protein TERM 2793 2684714 - 2684701 - g 71 -3.9 -4.86731 | TTGTCGTAAACAAAA TTGAA GATA TTCAA AATCAAAAGTTTTCC TERM 2794 2685099 - 2685109 + G 74 -6.8 -4.23781 | TTTCTATTTAGGGTA TCGG GTG CCGA TTTCGTTTTGGTAAC TERM 2795 2685288 - 2685278 - g 74 -6.8 -4.26681 | overlap 2685256 AGAAATTATGGAAAA CGCT GAT AGCG CGCTTATGGCTGCCA MADE_02471 2684145 - 2686082 + | diguanylate cyclase/phosphodiesterase MADE_02472 2686239 - 2686784 + | hypothetical protein TERM 2796 2686846 - 2686874 + G 100 -17.7 -4.68705 | opp_overlap 2686840 2686851, overlap 2686851 TATATTCAATTCTCA GAAAACCGAAAAG TTT CTTTTCGGTTTTC TTTTGTTCACCTTAT TERM 2797 2686851 - 2686869 + G 100 -11.8 -5.27476 | opp_overlap 2686840 2686851, overlap 2686846 TCAATTCTCAGAAAA CCGAAAAG TTT CTTTTCGG TTTTCTTTTGTTCAC TERM 2798 2686869 - 2686851 - g 100 -11.8 -4.4017 | opp_overlap 2686846 2686851, overlap 2686840 TCAATTCTCAGAAAA CCGAAAAG TTT CTTTTCGG TTTTCTTTTGTTCAC MADE_02473 2686826 - 2688238 + | O-antigen polymerase TERM 2799 2688541 - 2688556 + G 71 -6.8 -4.15698 | overlap 2688537 AGGTAAGCTAGTGAT GGCAGC CGTC GTTGCC TTGTTTCTGTGCGTA MADE_02474 2688272 - 2688685 + | hypothetical protein MADE_02475 2689437 - 2688682 - | hypothetical protein TERM 2800 2688760 - 2688772 + g 72 -4.7 -4.71234 | CCTGCAAACGGTTTC GCTCG CAT CGTGC TTTTGTATTGAATTT MADE_02476 2690098 - 2689430 - | capsular polysaccharide biosynthesis protein, putative TERM 2801 2690145 - 2690118 - R 72 -8.4 -3.61536 | opp_overlap 2690120 2690138, overlap 2690120 AAGGCAATGTCTAAA GACCTGGCACCA TCGT CGATGCCAGGTA ATATATGGCTATGTA TERM 2802 2690143 - 2690120 - R 80 -11 -3.38314 | opp_overlap 2690120 2690138, overlap 2690118 GGCAATGTCTAAAGA CCTGGCACCA TCGT CGATGCCAGG TAATATATGGCTATG MADE_02477 2692396 - 2690180 - | putative Exopolysaccharide biosynthesis protein TERM 2803 2691752 - 2691735 - G 80 -6.9 -4.63218 | opp_overlap 2691737 CTTTCTGTAAGAAAA GACGTCG CTTT CGCCGTC ATATCCAGCTTGGCT TERM 2804 2691908 - 2691919 + g 76 -4.4 -5.02074 | opp_overlap 2691908 TCTCATTAGCAAGGA CGTA GCTT TACG TTTTTTAGCCGCTAA MADE_02478 2692884 - 2692423 - | Periplasmic protein involved in polysaccharide export TERM 2805 2692621 - 2692594 - G 73 -9.8 -3.35679 | overlap 2692610 TTTGTTTACCGACAA CCCTGGCTGATA AGCA TAACCGCCAGGG CGCTTAACTTCGCCA MADE_02479 2694143 - 2692968 - | hypothetical protein TERM 2806 2694711 - 2694739 + H 70 -3.1 -4.99638 | overlap 2694714 ATGCGCTGGCATACC CTAGCAATATTAG GCA CAACTATTGCTTG TTTTTATATAAATGT MADE_02480 2694853 - 2696307 + | Sugar transferase involved in lipopolysaccharide synthesis MADE_02481 2696337 - 2697746 + | mannose-1-phosphate guanylyltransferase TERM 2807 2697776 - 2697793 + T 95 -9.1 -5.4251 | opp_overlap 2697776 TTGGAATAAATACTA GCAGGGC TTCG GTCCTGC TTTTTTGTATCTAAC TERM 2808 2697852 - 2697818 - T 100 -22.4 -4.81083 | opp_overlap 2697826, overlap 2697826 TCTAACCACCAAAAA CGAAAAAAGGCGAGCA TCC TGCTCGCCTTTTTCCG AAAGAACTTAAACTT TERM 2809 2697844 - 2697826 - T 100 -14.6 -5.54079 | opp_overlap 2697826, overlap 2697818 CCAAAAACGAAAAAA GGCGAGCA TCC TGCTCGCC TTTTTCCGAAAGAAC TERM 2810 2697826 - 2697844 + T 100 -14.6 -4.56597 | opp_overlap 2697826 2697818 CCAAAAACGAAAAAA GGCGAGCA TCC TGCTCGCC TTTTTCCGAAAGAAC MADE_02482 2698237 - 2697881 - | 50S ribosomal protein L20 MADE_02483 2698453 - 2698256 - | ribosomal protein L35 MADE_02484 2699006 - 2698572 - | Translation initiation factor 3 TERM 2811 2698862 - 2698874 + g 70 -4.8 -4.42765 | TTTGTTTTTTCTTCT GCTC TTTTT GAGC TTTACTTTTTTCGAA MADE_02485 2701136 - 2699220 - | threonyl-tRNA synthetase TERM 2812 2700236 - 2700254 + g 75 -6.7 -4.46615 | TTTCCCACAAAGAGC GGTCCAT CATTA ATGGGCC TTTTACTTCGTCGTA TERM 2813 2701530 - 2701544 + H 71 -6.4 -4.18494 | opp_overlap 2701530 ATCTTTATACCAAAG CGTTTC AAG GGAACG TTTTAAATAGGCGTC MADE_02486 2701596 - 2702480 + | hypothetical protein MADE_02487 2702532 - 2703281 + | pteridine reductase MADE_02488 2703326 - 2704351 + | hypothetical protein MADE_02489 2705461 - 2704358 - | putative mechanosensitive channel protein (MscS family) MADE_02490 2706193 - 2705567 - | Abortive infection protein MADE_02491 2706590 - 2707441 + | putative rpiR-family transcriptional regulatory protein TERM 2814 2707787 - 2707748 - g 70 -9.2 -3.39784 | overlap 2707746 TTAGCTGCAACAAGA GGCGAACTATGGCCATGG CGTG CCACAGCAACAGGCCGCC TTGCAGAAATCATTC MADE_02492 2707616 - 2708158 + | hypothetical protein MADE_02493 2708190 - 2708363 + | hypothetical protein TERM 2815 2709410 - 2709396 - g 82 -5.7 -5.25772 | overlap 2709385 AAAGCACAACAAAAA GTGGT GATTG ACCAC ATCAATGCGCTATTT MADE_02494 2708406 - 2709677 + | amidase TERM 2816 2710038 - 2710028 - g 76 -8.2 -4.07568 | opp_overlap 2710027 2710032 2710036 GGTGTTGCCGCAAAA GGCG CGA CGCC GTCGTTTTACGAAGG TERM 2817 2710032 - 2710042 + G 71 -6.8 -4.0896 | opp_overlap 2710028, overlap 2710027 2710036 TTGCCGCAAAAGGCG CGAC GCC GTCG TTTTACGAAGGCTTT TERM 2818 2710036 - 2710054 + G 76 -8.8 -3.76492 | opp_overlap 2710028, overlap 2710027 2710032 CGCAAAAGGCGCGAC GCCGTCGT TTT ACGAAGGC TTTGATGCAATTCCA TERM 2819 2710310 - 2710300 - g 76 -8.2 -4.16016 | overlap 2710279 2710308 CCAGTTTTTAATAAA GGGC AAA GCCC TTAAAAAAGGTAAAA MADE_02495 2709797 - 2711374 + | gamma-glutamyltranspeptidase, putative TERM 2820 2712231 - 2712254 + G 71 -10.3 -2.69471 | overlap 2712231 2712233 GTTCTTATCATCACT GGCTTGCGC ATGTTA GCGCAAGTC CTTATCTAGGAGTGC MADE_02496 2711445 - 2712263 + | hypothetical protein MADE_02497 2712274 - 2713554 + | aminotransferase, class V TERM 2821 2714187 - 2714197 + G 79 -8.2 -4.21408 | TAAGTGCAATAGCGG GCGC GAA GCGC TTTAATTTTACGGTT TERM 2822 2714382 - 2714394 + G 89 -9.1 -4.67755 | GTGTCAATGTTATTT CGGGT CGC ACCCG TTTTTCACTCGATAT MADE_02498 2713547 - 2714782 + | N-carbamoyl-L-amino acid amidohydrolase TERM 2823 2714841 - 2714857 + F 100 -12.3 -4.45738 | overlap 2714839 AAGGCCTTTTATCGC GAGAGCG TTC CGCTCTC TTTCTTCTTAAGATA MADE_02499 2714901 - 2715266 + | hypothetical protein TERM 2824 2715295 - 2715311 + T 100 -10.9 -5.95539 | opp_overlap 2715295 ACTCACGTTAATAAA TGCGCTA ATT TAGCGCA TTTTTTTGTTTAGGC TERM 2825 2715311 - 2715295 - T 90 -10.9 -4.18488 | opp_overlap 2715295 ACTCACGTTAATAAA TGCGCTA ATT TAGCGCA TTTTTTTGTTTAGGC TERM 2826 2715318 - 2715346 + T 72 -8.9 -3.30635 | TTTAGCGCATTTTTT TGTTTAGGCACCA AAA TGGGGCTTAGACA TTCTCCGAACATTTC MADE_02500 2715415 - 2715299 - | hypothetical protein MADE_02501 2715775 - 2717328 + | xanthine/uracil permease family protein TERM 2827 2717549 - 2717535 - f 71 -7.1 -3.85698 | TGTTGCGTTGATAAA GCCCT AAAAA AGGGC AACTAAAAATAACGA MADE_02502 2717572 - 2720001 + | TonB-dependent receptor TERM 2828 2720012 - 2720063 + F 71 -6.8 -4.09822 | TCTAGGTAGCCAATG CTGTTA-AGGTTGTCGTGCGTAGC ATAGAC GTTA-GCGCGACAACCACTGACAG TTTGTCTCCTCACTT TERM 2829 2720087 - 2720128 + F 70 -2.9 -5.1361 | gap 1, opp_overlap 2720087, overlap 2720103 CTCACTTTTACTAGA GAGCCCAGCACACTGTCTGA AGG TCACTTCG-GTGCTTGGCTC TTTTTTAGGATTTCT MADE_02503 2720223 - 2720396 + | hypothetical protein MADE_02504 2722434 - 2720431 - | Signal transduction histidine kinase MADE_02505 2723516 - 2722596 - | putative response regulator TERM 2830 2723477 - 2723495 + g 70 -2.2 -4.94058 | opp_overlap 2723474 CGTCAACAATTAGTA CCCGGCAC GCT GAGTAGGG TTTTATTTCCATTCC MADE_02506 2723933 - 2723715 - | response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) MADE_02507 2724280 - 2723984 - | response regulator TERM 2831 2724408 - 2724384 - H 72 -4.4 -4.68593 | opp_overlap 2724384 2724386, overlap 2724386 TGCATTATGTAAAAA TATTAGTCAA AGCAA TTGACTAATG TTTTTTTAAAGCACA TERM 2832 2724384 - 2724408 + H 93 -6.6 -5.40072 | opp_overlap 2724384 2724386, overlap 2724386 TGCATTATGTAAAAA TATTAGTCAA AGCAA TTGACTAATG TTTTTTTAAAGCACA TERM 2833 2724386 - 2724406 + H 76 -7 -4.34482 | opp_overlap 2724384 2724386, overlap 2724384 CATTATGTAAAAATA TTAGTCAA AGCAA TTGACTAA TGTTTTTTTAAAGCA MADE_02508 2724469 - 2724831 + | probable sensor/response hybrid, putative MADE_02509 2725961 - 2724951 - | adenosine deaminase TERM 2834 2726611 - 2726621 + G 79 -4 -5.2291 | AGGTATCGTTTTTTG GAAT GGT ATTC TTTTTCTTATACTGT TERM 2835 2726808 - 2726831 + G 71 -3.8 -4.90906 | overlap 2726811 2726813 TTTCAGAACCCGCTG TTATGCTCGC CCTT GCGGGTATCA TTTTTACTATTGTAC MADE_02510 2726282 - 2727613 + | Xanthine/uracil/vitamin C permease TERM 2836 2727671 - 2727694 + T 100 -14 -5.47821 | opp_overlap 2727671 AATAAATACAAAAAA GGTGGCTAAT TTAA ATTAGCCACC TTTTTTTAGATAAAT TERM 2837 2727694 - 2727671 - T 100 -14 -5.61913 | opp_overlap 2727671 AATAAATACAAAAAA GGTGGCTAAT TTAA ATTAGCCACC TTTTTTTAGATAAAT MADE_02511 2728052 - 2727750 - | hypothetical protein TERM 2838 2727842 - 2727856 + g 73 -7.8 -4.10007 | TACCCCACGTACACG CCGTGG TTC CCATGG TTTTACCGCAATTGT MADE_02512 2728994 - 2728113 - | hypothetical protein TERM 2839 2728220 - 2728209 - G 74 -7.2 -4.2123 | TACGTACTCAATAAA GCGC TGTA GCGC CGCCATACGAGCAGG MADE_02513 2729670 - 2729026 - | transcriptional regulator, TetR family protein MADE_02514 2729827 - 2729943 + | hypothetical protein MADE_02515 2730051 - 2731493 + | putative xanthine dehydrogenase, XdhA subunit TERM 2840 2733658 - 2733645 - g 73 -2.4 -5.24531 | opp_overlap 2733645 ATTTGGCAGAAAAAA TGCT GAAGAT AGCA TTTATCATTCAAAAG MADE_02516 2731486 - 2733852 + | xanthine dehydrogenase, molybdopterin binding subunit MADE_02517 2733849 - 2734790 + | Xanthine and CO dehydrogenase maturation factor, XdhC/CoxF family protein TERM 2841 2734939 - 2734923 - g 75 -2.9 -5.17054 | overlap 2734924 AGAACAGGCAAAAAA CGCATGG GCG CAATGCA GTAACAGCGATTATT MADE_02518 2734864 - 2735280 + | uricase-like protein MADE_02519 2735327 - 2735659 + | Transthyretin TERM 2842 2735799 - 2735779 - g 81 -3.3 -5.3472 | AAAAAAGAAATAAAA GATATCG GCGATTT CGATACC ATTGCAGCGCGCTAT MADE_02520 2735665 - 2736972 + | guanine deaminase MADE_02521 2737004 - 2738284 + | predicted membrane protein TERM 2843 2738327 - 2738287 - T 71 -3.9 -4.95302 | opp_overlap 2738295, overlap 2738289 2738295 GCAAAGACAATAAAA CAGTGAAAGCGATGTAGGC TAT ACCTTCATCGCTTTATCAA TCACTACTTGCCCTT TERM 2844 2738325 - 2738289 - T 79 -8.7 -4.07559 | opp_overlap 2738295, overlap 2738287 2738295 AAAGACAATAAAACA GTGAAAGCGATGTAGGC TAT ACCTTCATCGCTTTATC AATCACTACTTGCCC TERM 2845 2738295 - 2738319 + T 84 -10 -3.92869 | opp_overlap 2738289 2738287 2738295 AATAAAACAGTGAAA GCGATGTAGG CTATA CCTTCATCGC TTTATCAATCACTAC TERM 2846 2738319 - 2738295 - T 86 -10.7 -3.87694 | opp_overlap 2738295, overlap 2738289 2738287 AATAAAACAGTGAAA GCGATGTAGGC TAT ACCTTCATCGC TTTATCAATCACTAC TERM 2847 2738328 - 2738353 + T 85 -3.9 -5.53991 | overlap 2738329 TCATCGCTTTATCAA TCACTACTTGC CCTT GCAGGTTGTGC TTTTTTTCGTACATA TERM 2848 2738329 - 2738352 + T 71 -7.4 -3.9131 | overlap 2738328 CATCGCTTTATCAAT CACTACTTGC CCTT GCAGGTTGTG CTTTTTTTCGTACAT MADE_02522 2739588 - 2738305 - | putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) and Response Regulator MADE_02523 2740178 - 2739819 - | hypothetical transcriptional regulator MADE_02524 2740370 - 2740870 + | putative aldehyde dehydrogenase subunit III TERM 2849 2741427 - 2741371 - g 75 -2.9 -5.26875 | TCGGGAAGTAAAAAA GTCAGCTATGGCGATATTGTCGCTAAT GGC AACATCGACAAAACCTACACGGCTGAC GAGCTTGGTGCCATG TERM 2850 2741840 - 2741854 + G 70 -2.1 -5.06414 | gap 1 GTATTTGCCGAGACC GCGATG AAGG CA-CGC TTTTTGTTGACGAAG TERM 2851 2742097 - 2742118 + G 71 -3.6 -4.81083 | overlap 2742100 CACCAATACTATCTA GGTGGCGG ATTTGG TCGCCGTC TTTTTGGTGATTGGG TERM 2852 2742942 - 2742931 - g 80 -5.8 -5.02357 | CACAACGAAATAAAA GACG GTTA CGTC GCAAAGAAAAACCTT MADE_02525 2740867 - 2743164 + | Membrane-bound aldehyde dehydrogenase, large subunit TERM 2853 2743199 - 2743242 + T 100 -14.8 -4.1721 | gap 1, opp_overlap 2743209, overlap 2743203 2743205 CGCTTTTGGCGAGTG CCATGAGTAACCATCCCGCCT ATG AAGCGGGATGGTTACT-ATCG TTTTGCCGTGTGGCT TERM 2854 2743203 - 2743239 + T 100 -16.7 -3.10545 | opp_overlap 2743209, overlap 2743199 2743205 TTTGGCGAGTGCCAT GAGTAACCATCCCGCCT ATG AAGCGGGATGGTTACTA TCGTTTTGCCGTGTG TERM 2855 2743205 - 2743237 + T 100 -19.3 -3.10537 | opp_overlap 2743209, overlap 2743203 2743199 TGGCGAGTGCCATGA GTAACCATCCCGCCT ATG AAGCGGGATGGTTAC TATCGTTTTGCCGTG TERM 2856 2743233 - 2743209 - T 100 -16.5 -3.21416 | opp_overlap 2743205 2743203 2743199 GAGTGCCATGAGTAA CCATCCCGCCT ATG AAGCGGGATGG TTACTATCGTTTTGC MADE_02526 2743833 - 2743339 - | hypothetical protein TERM 2857 2744480 - 2744469 - g 76 -2.2 -5.30616 | GGAGGCAAAGAAAAA GCCT ACCA AAGC GAGGGGTTTAACCAC MADE_02527 2744094 - 2744732 + | putative NADPH-quinone reductase TERM 2858 2745504 - 2745516 + G 72 -9.1 -3.61715 | TGTGGGCCTATCTCC TGCGC TTG GCGCA TTCTTAGCAGGGGTG MADE_02528 2744770 - 2746668 + | glutathione-regulated potassium-efflux system protein KefC TERM 2859 2747633 - 2747622 - g 77 -7.2 -4.4009 | GGGTATGCCAGAAAA GCGC TACG GCGC AATGTATAAAGACCA TERM 2860 2747854 - 2747842 - g 88 -7.7 -5.01535 | opp_overlap 2747841 GCACAACCAGAAAAA GCCAT TGT ATGGC GCTTTAAACCTAGCG MADE_02529 2746837 - 2748048 + | putative multidrug resistance protein (substrate binding lipoprotein) MADE_02530 2748052 - 2751099 + | acriflavin resistance protein ei VT8 TERM 2861 2751156 - 2751136 - f 95 -15.5 -2.7185 | opp_overlap 2751136 AGTACGTTGTAACGA GTAGCGCCA AAA TGGCGCTAC TTTCAACTGCCTAAA TERM 2862 2751136 - 2751156 + F 100 -15.5 -3.61178 | opp_overlap 2751136 AGTACGTTGTAACGA GTAGCGCCA AAA TGGCGCTAC TTTCAACTGCCTAAA TERM 2863 2751457 - 2751470 + G 79 -4.5 -5.27023 | TAATCAAACTAATTG GGGTA TTGT TGCCC TTTTGTTTTTAGCGT MADE_02531 2751431 - 2753365 + | diguanylate cyclase/phosphodiesterase TERM 2864 2754247 - 2754267 + G 70 -4.7 -4.42806 | overlap 2754246 TTCGGATTATCTTCC CCTCAGTCA GGG TGATTCAGG TTTCTTTCAACCTGA TERM 2865 2754316 - 2754333 + G 100 -12.7 -4.9725 | opp_overlap 2754316 TGGGCAAACAAAAAA GAGGCGC AAAA GCGCCTC TTTTTATATCAGGCT TERM 2866 2754333 - 2754316 - g 100 -12.7 -5.63517 | opp_overlap 2754316 TGGGCAAACAAAAAA GAGGCGC AAAA GCGCCTC TTTTTATATCAGGCT MADE_02532 2753855 - 2754388 + | hypothetical protein MADE_02533 2756069 - 2754348 - | putative diguanylate cyclase/phosphodiesterase domain 2 (EAL) TERM 2867 2755745 - 2755761 + g 89 -4.3 -5.75945 | opp_overlap 2755745 2755748, overlap 2755748 GAGACGAAAAAACAT GAATGGG TTG CCCGTCC TTTTTTTTCAGCACT TERM 2868 2756375 - 2756357 - H 70 -8.9 -3.12892 | opp_overlap 2756354 AAAAACATTTCAACA TGCGACA CTTTT TGTCGCA AGCTATCTCTATGCT MADE_02534 2756428 - 2757468 + | transcriptional factor MADE_02535 2758550 - 2757465 - | putative cell division protein FtsZ TERM 2869 2759073 - 2759085 + r 87 -6.3 -5.28983 | GTGACTAATTTCGCA GCAAT TCG ATTGC TTTTTGTCTTTTAAA MADE_02536 2760186 - 2759110 - | hypothetical protein TERM 2870 2760118 - 2760130 + g 88 -7.7 -4.95876 | opp_overlap 2760114 ATAACTGAACAGGTC TGGGT TAA ACCCA TTTTTCATTATAGTT MADE_02537 2760759 - 2760346 - | putative bacterial regulatory protein, MarR MADE_02538 2760934 - 2760761 - | hypothetical protein MADE_02539 2761057 - 2762421 + | Homogentisate 1,2-dioxygenase MADE_02540 2762533 - 2762898 + | glyoxalase family protein TERM 2871 2762941 - 2762975 + T 100 -16.7 -5.1167 | opp_overlap 2762945 AGGGCTTTTTTGAAG TAAAGGCAGTGCATC TTTGC GATGTACTGCCTTTA TTTTTATCTTAGGTT TERM 2872 2762971 - 2762945 - T 86 -10.9 -3.90112 | opp_overlap 2762941 CTTTTTTGAAGTAAA GGCAGTGCATC TTTGC GATGTACTGCC TTTATTTTTATCTTA MADE_02541 2764194 - 2763121 - | 4-hydroxyphenylpyruvate dioxygenase TERM 2873 2764341 - 2764380 + H 90 -9.4 -4.3129 | opp_overlap 2764342, overlap 2764342 TCAGCGGTACGTCAA ACATACGGTTAGGGGAGG CGTA TTTTTCCTAACCGTATGA TTTTAGTAGTCAATA TERM 2874 2764342 - 2764379 + H 91 -12.9 -3.18292 | opp_overlap 2764342, overlap 2764341 CAGCGGTACGTCAAA CATACGGTTAGGGGAGG CGTA TTTTTCCTAACCGTATG ATTTTAGTAGTCAAT MADE_02542 2764402 - 2764605 + | hypothetical protein MADE_02543 2764790 - 2765137 + | arsenate reductase TERM 2875 2765293 - 2765316 + G 74 -3.8 -5.07652 | gap 1 ACTAACTTGTGGTCT CGCCGAGGC AAAGAGG GCC-CGGTG TTTTGTTTTGCAGGG MADE_02544 2765131 - 2766267 + | succinyl-diaminopimelate desuccinylase TERM 2876 2766319 - 2766304 - g 80 -5.4 -4.9725 | gap 1, opp_overlap 2766306 2766309 ACCGTTACAGAAAAA GCGTGGC TGG GCCA-GC TTAATGAAGATTTAG MADE_02545 2766283 - 2766981 + | D-alanyl-D-alanine carboxypeptidase MADE_02546 2767014 - 2767277 + | hypothetical protein TERM 2877 2767492 - 2767507 + G 75 -6.1 -4.42386 | overlap 2767487 2767486 TTGCCATGATCATCG GCACC GCCGTA GGTGC TTTTATGGGTCACAG TERM 2878 2767534 - 2767551 + G 80 -5.5 -5.08601 | ACAGCGCCGCTATGT TTGCCCC CTTA GGCGCAA TTTTTATTAACCTCA MADE_02547 2767428 - 2768681 + | proton/glutamate symporter TERM 2879 2768710 - 2768727 + T 100 -12.7 -4.20868 | opp_overlap 2768710 AGCGGGCATAAAAAA GGTGGCC TATC GGCCACC TTGTTATTTTAGAGC TERM 2880 2768727 - 2768710 - T 100 -12.7 -5.24531 | opp_overlap 2768710 AGCGGGCATAAAAAA GGTGGCC TATC GGCCACC TTGTTATTTTAGAGC MADE_02548 2769136 - 2768810 - | hypothetical protein MADE_02549 2769530 - 2769195 - | putative HIT family hydrolase MADE_02550 2770641 - 2769598 - | succinylglutamate desuccinylase TERM 2881 2770209 - 2770199 - G 76 -2.4 -5.40072 | opp_overlap 2770199 2770199 GCCGCTTCAAAAAAA GACG CAA CGGC CTCTTCTAACTGCTT MADE_02551 2772220 - 2770856 - | sensory box/GGDEF domain/EAL domain protein TERM 2882 2771683 - 2771708 + g 74 -3.3 -4.94962 | overlap 2771686 CCTTATCTGTTTTGG TCAGTGCGAAG TAGT TTTCGTACTTA TTTTCTTTGGCTTGT TERM 2883 2771686 - 2771705 + g 70 -5 -4.5493 | overlap 2771683 TATCTGTTTTGGTCA GTGCGAAG TAGT TTTCGTAC TTATTTTCTTTGGCT TERM 2884 2772083 - 2772073 - G 72 -5.4 -4.51743 | opp_overlap 2772075, overlap 2772075 CCAGCATCAAAGAAA TAGC GCC GCTA CGAGACGCCTGTTTT TERM 2885 2772410 - 2772385 - R 93 -5.4 -5.59655 | gap 1 TAAAGCAATAAAAAA GCCCGACAAGT TTATC ACC-GCCGGGC TATTTCTTTCTCGTT MADE_02552 2774945 - 2772432 - | putative maltodextrin phosphorylase TERM 2886 2774187 - 2774209 + g 72 -6.3 -4.30014 | AGAAGATTCTGACTG CCATAAACG AAGCA CGTTTACGG TTTTACCTTCATAAC TERM 2887 2774543 - 2774558 + g 72 -9 -3.63073 | overlap 2774540 AACCGCCGTTACCCA GAGCCA TATC TGGCTC TTCTTCAAGGATATC TERM 2888 2774700 - 2774716 + g 77 -3.7 -5.2696 | GTGGACAGCACGGGT GTCATTG AGA TAGTGAC TTTTTTGAGTTTTGC TERM 2889 2775075 - 2775048 - R 95 -9.2 -5.4588 | opp_overlap 2775048 TAAAATTACAAAAAA TCGCATGAATTC GTAT GCACTCATGCGA TTTTTAACATTATTG TERM 2890 2775048 - 2775075 + r 81 -7 -4.70626 | opp_overlap 2775048 TAAAATTACAAAAAA TCGCATGAATTC GTAT GCACTCATGCGA TTTTTAACATTATTG MADE_02553 2776779 - 2775127 - | phosphoglucomutase, alpha-D-glucose phosphate-specific TERM 2891 2776320 - 2776304 - G 75 -10.1 -3.63627 | opp_overlap 2776303 2776304 GGGTTATATTTGAAA CCACCGT CTG ACGGCGG GTTATGAGAAGGGGT TERM 2892 2776549 - 2776537 - G 76 -7.7 -4.2461 | opp_overlap 2776536 ATCTTTACCAACAAA TAGCG GGC CGCTA ATGCCTTCTTGCTTG MADE_02554 2777643 - 2776825 - | SeqA protein TERM 2893 2778848 - 2778838 - g 74 -5.4 -4.69027 | AAACTGAGTCAAAAA CTGT TAG ACAG CGTTGACCCCCTTGC MADE_02555 2777923 - 2778870 + | MoxR protein MADE_02556 2778943 - 2780067 + | hypothetical protein TERM 2894 2780620 - 2780633 + G 76 -5.3 -4.77036 | TGCAAGCCTCTCCCA TAGCA TTGC TGCTA TTTTTACTGCTGCCC MADE_02557 2780064 - 2782127 + | transglutaminase family protein TERM 2895 2782641 - 2782585 - f 90 -10.2 -4.36366 | gap 1, opp_overlap 2782594, overlap 2782594 CACAAAATAGATAAA CAGGACAAAGGCGTCCCCAGCACTTTC TTTT GAGCGTGCTGCGGACGCCTTTTTT-TG ATCTTTAGGAACACT TERM 2896 2782594 - 2782633 + F 100 -18.6 -5.66989 | opp_overlap 2782594 2782585 GATAAACAGGACAAA GGCGTCCCCAGCACTTTC TTTT GAGCGTGCTGCGGACGCC TTTTTTTGATCTTTA TERM 2897 2782633 - 2782594 - f 100 -16.4 -4.12037 | opp_overlap 2782594, overlap 2782585 GATAAACAGGACAAA GGCGTCCCCAGCACTTTC TTTT GAGCGTGCTGCGGACGCC TTTTTTTGATCTTTA TERM 2898 2783521 - 2783509 - g 72 -4.8 -4.67353 | CCACTCACGTAAAAA CGCT ACCTA AGCG CACCATTCCTGTAAA MADE_02558 2782722 - 2783570 + | Formate/nitrite transporter TERM 2899 2783898 - 2783924 + G 76 -8 -4.21351 | opp_overlap 2783899, overlap 2783899 AGTACGGTAAGCCAA ATGGCGAGTG ATTTCGC CACTCGCCAA TTTATTAAGCTATTT TERM 2900 2783899 - 2783923 + G 75 -11.5 -3.11726 | opp_overlap 2783899, overlap 2783898 GTACGGTAAGCCAAA TGGCGAGTG ATTTCGC CACTCGCCA ATTTATTAAGCTATT TERM 2901 2783923 - 2783899 - g 93 -12.2 -3.76125 | opp_overlap 2783899 2783898 GTACGGTAAGCCAAA TGGCGAGTGA TTTCG CCACTCGCCA ATTTATTAAGCTATT TERM 2902 2784962 - 2784951 - g 74 -7.2 -4.27796 | opp_overlap 2784960, overlap 2784944 GAACAAATTGCAAAA GGCC TGCA GGCC ATGCATCGCCAAGGC MADE_02559 2783706 - 2785523 + | Serine/threonine protein kinase MADE_02560 2785554 - 2785829 + | cyanate hydratase MADE_02561 2786101 - 2786268 + | cyanate hydratase TERM 2903 2786312 - 2786295 - T 100 -12.7 -5.65177 | opp_overlap 2786295 ACAGGCATAAAAAAA GCCGGTC TATT GACCGGC TTTTTAGTGTATCTC TERM 2904 2786295 - 2786312 + T 100 -12.7 -4.86133 | opp_overlap 2786295 ACAGGCATAAAAAAA GCCGGTC TATT GACCGGC TTTTTAGTGTATCTC MADE_02562 2788459 - 2786372 - | elongation factor EF-2 TERM 2905 2788667 - 2788643 - R 86 -7.2 -5.16681 | TGAAAAATAACAAAA TCACACCTCA TCTTT TGAAGTGCGA ACAATTGTTACTGTA MADE_02563 2789740 - 2788643 - | methyltransferase MADE_02564 2790158 - 2789733 - | uncharacterized small membrane protein TERM 2906 2789855 - 2789842 - G 77 -3.7 -5.1471 | opp_overlap 2789843, overlap 2789843 ATGATAAAAAACAAA CCGCC TAGT GGCGT TATCGGTCCAAACCA TERM 2907 2790167 - 2790177 + r 75 -5.4 -4.74801 | CCAGCATGCCTCCTC TGAG ATT CTCA TTTTTCATCAAATTA MADE_02565 2790861 - 2790190 - | predicted hydrolase of the alpha/beta-hydrolase fold MADE_02566 2791775 - 2790873 - | putative transcriptional regulator, LysR family protein TERM 2908 2791391 - 2791371 - G 78 -6.7 -4.58395 | opp_overlap 2791371 GTCATCTTCCAAAAA GCCCTCGTC AAA GTCGACGGC TTTTATACGAACGTC TERM 2909 2791371 - 2791391 + g 72 -6.7 -4.3739 | opp_overlap 2791371 GTCATCTTCCAAAAA GCCCTCGTC AAA GTCGACGGC TTTTATACGAACGTC TERM 2910 2792154 - 2792141 - g 72 -6.7 -4.36914 | opp_overlap 2792141 TGTTTTGCCAGAAAA CGATG CGCA CATCG TTGTGAAAAAACAGT MADE_02567 2791986 - 2792279 + | hypothetical protein TERM 2911 2792334 - 2792292 - T 95 -14.3 -2.92389 | gap 1, opp_overlap 2792292 2792294 TAAGCTACTCACACA CCTGAT-ACGCATGCCGGTG CTTG CACCGGCATACGCCATCATG TTTTGCTTAGGTATT TERM 2912 2792292 - 2792334 + T 90 -9.9 -4.45151 | gap 1, opp_overlap 2792292, overlap 2792294 TAAGCTACTCACACA CCTGAT-ACGCATGCCGGTG CTTG CACCGGCATACGCCATCATG TTTTGCTTAGGTATT TERM 2913 2792294 - 2792332 + T 86 -11.1 -3.82321 | gap 1, opp_overlap 2792292, overlap 2792292 AGCTACTCACACACC TGAT-ACGCATGCCGGTG CTTG CACCGGCATACGCCATCA TGTTTTGCTTAGGTA MADE_02568 2793195 - 2792341 - | 2-dehydro-3-deoxyphosphooctonate aldolase MADE_02569 2793560 - 2793216 - | Invasion gene expression up-regulator, SirB TERM 2914 2793298 - 2793314 + g 72 -2.9 -5.00616 | opp_overlap 2793288, overlap 2793296 2793281 AAAAAGCCCCATTTA GCCAGGG CTG TTTTGGC TTTTTTAAGCGCAAA TERM 2915 2793544 - 2793534 - G 86 -4 -5.47159 | GCGGAAGATAAAAAA TAAG ATA CTTA AGCCTACAGCAGTCA TERM 2916 2793634 - 2793671 + H 73 -7.1 -4.05033 | opp_overlap 2793634 TATTACTGATATAAA TTGTGTCTTTATAAGGC GTAA GCCTAATGAAGTTACAA TTTATGTGCAGTCAG TERM 2917 2793695 - 2793723 + G 95 -13.3 -4.32678 | opp_overlap 2793700, overlap 2793700 CAGTCAGCTTCAAAT AAAAACAGGTGCT TTC AGCACCTGTTTTA TTGTTTGTTTAGCGC TERM 2918 2793718 - 2793700 - g 100 -13.2 -5.27938 | opp_overlap 2793695 2793700 AGCTTCAAATAAAAA CAGGTGCT TTC AGCACCTG TTTTATTGTTTGTTT TERM 2919 2793700 - 2793718 + G 100 -13.2 -5.10765 | opp_overlap 2793700, overlap 2793695 AGCTTCAAATAAAAA CAGGTGCT TTC AGCACCTG TTTTATTGTTTGTTT MADE_02570 2793660 - 2793776 + | hypothetical protein MADE_02571 2795373 - 2793808 - | response regulator MADE_02572 2796381 - 2795524 - | peptide release factor-glutamine N5-methyltransferase(HemK) TERM 2920 2795958 - 2795994 + g 80 -12.4 -3.06492 | gap 1, opp_overlap 2795969 CAATAACCGATGCTT GGGGTAATT-CACTGGC TAGC GCCAGTGCAATGGCCCC TGTTCCGGTCCCTAA MADE_02573 2797468 - 2796383 - | peptide chain release factor 1 MADE_02574 2798311 - 2797484 - | glutamyl-tRNA reductase TERM 2921 2797958 - 2797972 + g 71 -3.5 -4.85599 | CATCGGCATATTTCT GCGCT GTTTA AGTGC TTTTTCTACCATGCC TERM 2922 2798470 - 2798456 - g 72 -8.6 -3.76413 | TGTCAAAACTGGAAA GTTTCC TAT GGAAAC TACGGCAGCGTTAAA MADE_02575 2798324 - 2798599 + | outer membrane lipoprotein LolB precursor MADE_02576 2798587 - 2799504 + | 4-diphosphocytidyl-2C-methyl-D-erythritol kinase TERM 2923 2799781 - 2799809 + G 85 -12.6 -3.3514 | opp_overlap 2799781 2799787, overlap 2799787 CAGCGTAGAAATTCA TGAAAACGTCCG TGGCT CGGACGTTTTTA TTATCCAATCTACGT TERM 2924 2799809 - 2799781 - g 71 -10.4 -2.7083 | opp_overlap 2799781 2799787, overlap 2799787 CAGCGTAGAAATTCA TGAAAACGTCCG TGGCT CGGACGTTTTTA TTATCCAATCTACGT TERM 2925 2799803 - 2799787 - g 83 -9.4 -4.33767 | opp_overlap 2799781 2799787, overlap 2799781 AGAAATTCATGAAAA CGTCCG TGGCT CGGACG TTTTTATTATCCAAT TERM 2926 2799787 - 2799803 + G 100 -9.4 -5.19328 | opp_overlap 2799787 2799781, overlap 2799781 AGAAATTCATGAAAA CGTCCG TGGCT CGGACG TTTTTATTATCCAAT MADE_02577 2799647 - 2800594 + | ribose-phosphate pyrophosphokinase TERM 2927 2800657 - 2800619 - T 93 -11 -4.76312 | opp_overlap 2800619 GATAAGATTTAAAAA GCGAGTGAACTGGCACTT ATA ACGGACCACTTCACTCGC TTTTTTACATATGTC TERM 2928 2800619 - 2800657 + T 90 -8.8 -5.14477 | opp_overlap 2800619 GATAAGATTTAAAAA GCGAGTGAACTGGCACTT ATA ACGGACCACTTCACTCGC TTTTTTACATATGTC MADE_02578 2800947 - 2800711 - | hypothetical protein MADE_02579 2801562 - 2802071 + | ribose-phosphate pyrophosphokinase TERM 2929 2802721 - 2802731 + G 74 -5.4 -4.67353 | GCGGATTAGGACACC TTGC CCT GCAA TTTTTAAATGCATGG MADE_02580 2802186 - 2803187 + | zinc-containing alcohol dehydrogenase family protein TERM 2930 2803224 - 2803209 - f 89 -10.4 -4.15366 | opp_overlap 2803209 ATTGAAACAACTAAA GCACGC TTTG GCGTGC TTTTTTGTATTGGCA TERM 2931 2803209 - 2803224 + F 100 -10.4 -5.47159 | opp_overlap 2803209 ATTGAAACAACTAAA GCACGC TTTG GCGTGC TTTTTTGTATTGGCA TERM 2932 2803346 - 2803371 + F 71 -3.9 -4.88258 | GGTGGTGTTAGAATT CGCCGCCCT TGAATTTT GGGGTGGTG TTTTATTGTGCTTTT TERM 2933 2803469 - 2803445 - f 82 -11.5 -3.25539 | overlap 2803443 CAACGCCAATTAACA GTGGGTTTTGG TCG CAAAAACCCAC ACCATTAGACTTATA MADE_02581 2803500 - 2804132 + | ribosomal protein L25 TERM 2934 2804581 - 2804568 - g 70 -5.2 -4.52857 | ACCCTGGACATAAAA GCCG CGTTAC CGGC CATGTCTTAGGAAAA MADE_02582 2804138 - 2804719 + | peptidyl-tRNA hydrolase TERM 2935 2805213 - 2805188 - g 88 -7.5 -5.06585 | gap 1 GAAACCACAGAAAAA GCACTGCATCGC GTA GCGAAGC-GCGC TAAAGGTGGCGATGC MADE_02583 2804762 - 2805853 + | putative GTP-binding protein TERM 2936 2805844 - 2805877 + F 79 -5.5 -5.00616 | gap 1, overlap 2805847 TATTCACTTCCGCTT TAACGTGTAACTTCTG GTG TAGAAGTTA-ACGCTA TTTTTTGAAAGCCAC TERM 2937 2805888 - 2805903 + F 100 -10.4 -5.85425 | opp_overlap 2805888 CGCTATTTTTTGAAA GCCACC GCAA GGTGGC TTTTTTGTTTGTTTC TERM 2938 2805903 - 2805888 - f 79 -10.4 -3.54424 | opp_overlap 2805888 CGCTATTTTTTGAAA GCCACC GCAA GGTGGC TTTTTTGTTTGTTTC MADE_02584 2805979 - 2806776 + | peptidyl-prolyl cis-trans isomerase, cyclophilin-type MADE_02585 2807186 - 2806758 - | polysaccharide biosynthesis protein TERM 2939 2807280 - 2807294 + r 73 -7.1 -4.11692 | TATTCCAATGTTTTT CGCCT CAACT AGGCG TTTTAGCGGTAGATA MADE_02586 2808245 - 2807367 - | glycosyl transferase MADE_02587 2809527 - 2808274 - | Capsule polysaccharide biosynthesis TERM 2940 2808811 - 2808828 + g 74 -3.5 -5.08824 | gap 1, overlap 2808813 TTCGAATTGTTGCTC GCTAAAAC TCC GTTTT-GC TTTTTTCACTGCCAA MADE_02588 2810374 - 2809529 - | Glycosyl transferase, family 2 MADE_02589 2811743 - 2810532 - | Glycosyltransferase MADE_02590 2812730 - 2811744 - | Glycosyl transferase, family 2 TERM 2941 2811986 - 2811975 - G 79 -4.4 -5.25735 | opp_overlap 2811975, overlap 2811983 GTAAAAAATTAAAAA CCTA ACGA TAGG TATTAAACCTATTAG TERM 2942 2812149 - 2812169 + g 72 -2.6 -5.03145 | gap 1, overlap 2812151 GTTAGTCTCAACGGG TACAT-GCG TTAC CGCCATGTG TTTTTTACCCGATTG TERM 2943 2812530 - 2812542 + g 76 -4.1 -5.07486 | opp_overlap 2812525, overlap 2812525 TCTGAAAGTACGTGC TAGCC CAC GGTTA TTTTTGTTGCGAATG TERM 2944 2813334 - 2813308 - g 84 -5 -5.32882 | TAGCATTACAAAAAA GTGGCGCTACTC ACT GTTCAACGCCAC CCGCTATTCTCATTG MADE_02591 2813076 - 2814158 + | Glycosyl transferase, group 1 MADE_02592 2814155 - 2814733 + | O-acetyltransferase MADE_02593 2814730 - 2815767 + | hypothetical protein MADE_02594 2817202 - 2815721 - | possible polysaccharide export protein TERM 2945 2815957 - 2815935 - G 82 -7.8 -4.64861 | opp_overlap 2815934 2815935 TCTGCGGAAAATAAA CTAATGGC GAAAAAG GCCATTAG ATTAATCATTACGCC TERM 2946 2817142 - 2817111 - G 89 -11 -4.07618 | opp_overlap 2817115 CGCGCAACAACTAAA GTACTTAGCAAGCC CAAT AGCTTGCTAATTAC CTGAGCAGCACTTGA TERM 2947 2817115 - 2817138 + g 70 -9.7 -3.05384 | opp_overlap 2817111 CAACAACTAAAGTAC TTAGCAAGC CCAATA GCTTGCTAA TTACCTGAGCAGCAC MADE_02595 2818331 - 2817183 - | glycosyltransferase MADE_02596 2819754 - 2818324 - | eight transmembrane protein EpsH TERM 2948 2819301 - 2819289 - G 77 -9.1 -3.87994 | opp_overlap 2819288 2819287 2819289 AGCCATTTCTATAAA GTGGG ACG CCCAC CATTTTTAGCAACGT MADE_02597 2820590 - 2819778 - | Polysaccharide deacetylase MADE_02598 2822038 - 2820626 - | bacterial sugar transferase domain protein MADE_02599 2822268 - 2822819 + | polysaccharide biosynthesis/export protein TERM 2949 2823550 - 2823530 - g 89 -9.1 -4.66537 | AATAAAGCAAACAAA GAAAAAGCT AGA AGCCTTTTC CAAGCAACTCGCTAA MADE_02600 2822838 - 2824397 + | chain length determinant family protein MADE_02601 2824397 - 2825296 + | putative exopolysaccharide biosynthesis protein TERM 2950 2825961 - 2825971 + G 74 -6.8 -4.36914 | opp_overlap 2825960, overlap 2825959 GAACGCGGTGAAAGT TCGC AGA GCGA TTTTATGACGCGAAA MADE_02602 2825277 - 2827001 + | hypothetical protein MADE_02603 2828272 - 2827103 - | putative general secretion pathway protein A MADE_02604 2828576 - 2828331 - | ADP-heptose synthase MADE_02605 2829440 - 2828679 - | ADP-heptose synthase MADE_02606 2829760 - 2829473 - | ADP-heptose synthase MADE_02607 2829783 - 2830139 + | hypothetical URI domain endonuclease MADE_02608 2831049 - 2830144 - | putative ATP synthase F0, A subunit TERM 2951 2830783 - 2830794 + g 71 -7.2 -4.08948 | CCCGAATGTCACCAT GCCG ATAG CGGC TTCTTTATAGCCTTG MADE_02609 2831082 - 2831282 + | hypothetical protein TERM 2952 2832796 - 2832817 + G 77 -7.3 -4.41348 | gap 1, overlap 2832799 GATCAGCTTTTTATT GCATGCCAAG ACG CTTGGCG-GC TTTCTTTGCAAGAGG TERM 2953 2833739 - 2833751 + G 90 -10.5 -4.21141 | TGCGCCTGCGCCCCT CCGGC AAC GCCGG TTTGCTTTGTTGCCA MADE_02610 2831341 - 2834313 + | putative glutamate-ammonia-ligase adenylyltransferase TERM 2954 2834422 - 2834390 - T 100 -12.7 -4.52101 | opp_overlap 2834388 2834392, overlap 2834393 2834394 AATAATGAAGGAAAA CAAGCCGCTATCGCC TTA AGCGATAGCGGTGTG AATTCAGTACCAAAA TERM 2955 2834392 - 2834420 + T 76 -11 -2.54896 | opp_overlap 2834390 2834393 2834394, overlap 2834388 TAATGAAGGAAAACA AGCCGCTATCGC CTTAA GCGATAGCGGTG TGAATTCAGTACCAA TERM 2956 2834419 - 2834393 - T 100 -13 -4.34912 | opp_overlap 2834392 2834388, overlap 2834390 2834394 AATGAAGGAAAACAA GCCGCTATCGCC TTA AGCGATAGCGGT GTGAATTCAGTACCA TERM 2957 2834418 - 2834394 - T 100 -16.5 -3.19321 | opp_overlap 2834392 2834388, overlap 2834393 2834390 ATGAAGGAAAACAAG CCGCTATCGCC TTA AGCGATAGCGG TGTGAATTCAGTACC MADE_02611 2835086 - 2834469 - | hypothetical protein TERM 2958 2835142 - 2835132 - R 83 -3.2 -5.54894 | AACGCAGTAAAAAAA GTGA TAA CCAC GTCTTTATGTTGTTC MADE_02612 2836109 - 2835264 - | lipid A biosynthesis lauroyl acyltransferase MADE_02613 2836639 - 2836382 - | hypothetical protein MADE_02614 2837339 - 2836857 - | hypothetical protein MADE_02615 2837380 - 2837505 + | hypothetical protein TERM 2959 2839188 - 2839178 - g 80 -6.8 -4.59773 | opp_overlap 2839186 CTTTAGTGTTAAAAA TGCG TTC CGCA GCCTAGGTAAAGGCT TERM 2960 2839473 - 2839440 - g 72 -4.7 -4.68545 | gap 1, opp_overlap 2839441, overlap 2839441 ATTGAAGATAGAAAA CTTGCACTACCGTACT TCG AGTACGCTA-TGCAAT GGTCTTTACAACAAG MADE_02616 2837733 - 2839982 + | Acyl-coenzyme A dehydrogenase (ACDH) TERM 2961 2840019 - 2840038 + F 100 -10 -5.63517 | opp_overlap 2840001 2840019 TTACATACCTGTAAA GCCCTATC CTTC GATGGGGC TTTTTTATTTACAAG MADE_02617 2840133 - 2840690 + | hypothetical protein MADE_02618 2841457 - 2840687 - | putative transposase MADE_02619 2842217 - 2841726 - | transposase IS3/IS911 family protein TERM 2962 2841940 - 2841971 + g 71 -9.6 -3.19192 | gap 1, overlap 2841942 TTCCATTGCTGGATT TGCT-CCGGGAAAAG GCC CTTTTTCCGGCAGTA TTCACTTACCTCAAC TERM 2963 2841942 - 2841969 + g 71 -10 -3.1585 | gap 1, overlap 2841940 CCATTGCTGGATTTG CT-CCGGGAAAAG GCC CTTTTTCCGGCAG TATTCACTTACCTCA MADE_02620 2842335 - 2842502 + | hypothetical protein MADE_02621 2843600 - 2842596 - | hypothetical maturase TERM 2964 2842781 - 2842791 + g 84 -8.2 -4.68424 | TTAGCCAGCGATGGA GGCG GCT CGCC TTTTTCCATAACTTG TERM 2965 2843054 - 2843077 + g 72 -5.4 -4.48877 | gap 1, opp_overlap 2843056, overlap 2843054 2843057 CAAGGAACTTCACAC CAT-CATCACT GTG AGTGATGTGTG TTTTATCCGTGTTTA TERM 2966 2843057 - 2843073 + g 75 -9.5 -3.49186 | opp_overlap 2843056, overlap 2843054 2843054 GGAACTTCACACCAT CATCACT GTG AGTGATG TGTGTTTTATCCGTG MADE_02622 2843866 - 2843669 - | hypothetical protein MADE_02623 2844245 - 2844105 - | hypothetical protein TERM 2967 2844542 - 2844562 + G 70 -4.7 -4.42806 | overlap 2844541 TTCGGATTATCTTCC CCTCAGTCA GGG TGATTCAGG TTTCTTTCAACCTGA TERM 2968 2844632 - 2844612 - g 100 -14.1 -5.95539 | opp_overlap 2844612 GGGCAAACAAAAAAA TGCCCACAT AGA ATGTGGGCA TTTTTAATCTCTGCG TERM 2969 2844612 - 2844632 + G 100 -14.1 -4.84527 | opp_overlap 2844612 GGGCAAACAAAAAAA TGCCCACAT AGA ATGTGGGCA TTTTTAATCTCTGCG MADE_02624 2844462 - 2844704 + | hypothetical protein MADE_02625 2847191 - 2844681 - | TonB-dependent receptor TERM 2970 2848131 - 2848151 + G 100 -8.3 -5.79595 | ATGTCTTTATGCGCT CTTCTCGAT GAA AGCGAGAAG TTTTTTATTTTAGGG TERM 2971 2848721 - 2848695 - g 71 -7.2 -4.18401 | opp_overlap 2848714, overlap 2848687 GTAGACACGGCAAAA GCCGTTGCACAT GCC ATGCGAAGCGGC GTTACCGTTCCTATT MADE_02626 2847615 - 2849669 + | GGDEF/EAL domain protein MADE_02627 2849675 - 2850256 + | thymidine kinase TERM 2972 2850297 - 2850323 + F 83 -12.4 -2.69647 | TTTTAAATCTTCTTT CGTAGGCTAATA ACC TTTTAGCCTACG TCATCTAAATTTCTT TERM 2973 2851728 - 2851738 + G 82 -6.8 -4.73614 | opp_overlap 2851727 CCAATTTCAAATGAG TGCC GAT GGCA TTTATTTTACTGATA TERM 2974 2852427 - 2852443 + G 71 -9.5 -3.14132 | TGGTAACCAAGTTGT TGATGCA GAC TGCATCA TTACTGACGGAGACG TERM 2975 2852523 - 2852511 - g 70 -4.8 -4.42238 | opp_overlap 2852511 CGAGCTTAACGAAAA TCGC TACTT GCGA TTCGGTGCTTCAAAA TERM 2976 2853395 - 2853380 - g 71 -3.3 -4.78157 | ACGAAAAAGAAGAAA CCATT GATGGT AATGG CATCGTTACGTTGCG MADE_02628 2850559 - 2853462 + | TonB-dependent receptor TERM 2977 2853522 - 2853540 + T 76 -3.2 -5.28983 | opp_overlap 2853522 AGCGGCCCTCAACTA TTGAGA CAGTGAT TCTCAA TTTTTCTATTTTGAA MADE_02629 2854721 - 2853696 - | Transcriptional regulator TERM 2978 2853749 - 2853782 + g 89 -8.9 -4.59853 | TAGTTTTAGCCTCGA GGTTTTCAAGCAGCG CTTT TGTTGCTTGAACGCC TTTTTCAGAGCTTGA MADE_02630 2855531 - 2854902 - | uracil phosphoribosyltransferase TERM 2979 2856482 - 2856472 - g 70 -2.4 -4.94487 | GGATAAAAGACAAAA TGCG TAG CGCT CAGCTTAGCCCGAAC MADE_02631 2855877 - 2857160 + | putative lipoprotein MADE_02632 2857398 - 2857177 - | helix-turn-helix domain protein TERM 2980 2857432 - 2857456 + r 100 -14.3 -4.08692 | opp_overlap 2857418 2857432 ACGGGCATTAAAAAA GCCCAGATGGT GAT ACCTTCTGGGC TTTTGCAAAACGTTC TERM 2981 2857456 - 2857432 - R 100 -14.3 -5.14965 | opp_overlap 2857432, overlap 2857418 ACGGGCATTAAAAAA GCCCAGATGGT GAT ACCTTCTGGGC TTTTGCAAAACGTTC MADE_02633 2858331 - 2857789 - | hypothetical protein MADE_02634 2859346 - 2858441 - | hypothetical protein TERM 2982 2859318 - 2859298 - G 70 -4.7 -4.40804 | overlap 2859307 CATTAGCCGATAAAA CGCTAGCAA CGC TTGTTAACG CGATAAAAGCAATAA MADE_02635 2861631 - 2859358 - | hypothetical protein TERM 2983 2861711 - 2861693 - R 84 -6.8 -5.00616 | CGGCGCCCTAAAAAA TGTTAACA GCA CGTTAACA AGACGTATAAGAAAG TERM 2984 2861744 - 2861759 + r 70 -3.4 -4.84182 | opp_overlap 2861744 GCTTAGATGCAAAAA TTAAAA GTTT TTTTAA TTTCTTATTTTTTAC MADE_02636 2862735 - 2861764 - | GTP-binding protein TERM 2985 2861797 - 2861812 + g 75 -3.2 -5.24647 | GCGGCTTTGTTCTTG GCGC TTTTCCTC GCGC TTTTCTTTTCTATCT MADE_02637 2863586 - 2862801 - | rRNA methyltransferase TERM 2986 2863030 - 2863009 - G 80 -5.9 -5.03314 | gap 1, opp_overlap 2863015, overlap 2863015 2863024 TTCATGTCTAAAAAA GCAAAGCGCT CAA AGCG-TTCGC TTAGCGTATCTAACG TERM 2987 2863523 - 2863547 + g 72 -6.5 -4.35483 | opp_overlap 2863525, overlap 2863525 GCTCCCCCTCCACCA AATAGAAGCCA AAC TGGTTTCTATA TTTCTTCTGATGAAG TERM 2988 2863525 - 2863545 + g 76 -9.1 -3.78004 | opp_overlap 2863525, overlap 2863523 TCCCCCTCCACCAAA TAGAAGCCA AAC TGGTTTCTA TATTTCTTCTGATGA MADE_02638 2863878 - 2864534 + | Enoyl-CoA hydratase/carnithine racemase TERM 2989 2864601 - 2864644 + T 73 -9.8 -3.11316 | gap 1, opp_overlap 2864608 CATAGGCCCCCAGCA TTCGAAATGCGCGTTAACGTT GAT AATGTTAACGCGCATCT-GAC TATCTTACCTCGTGC TERM 2990 2864638 - 2864608 - T 100 -15.6 -3.62096 | opp_overlap 2864601 CCCCAGCATTCGAAA TGCGCGTTAACGTT GAT AATGTTAACGCGCA TCTGACTATCTTACC MADE_02639 2865174 - 2864659 - | hypothetical protein TERM 2991 2865251 - 2865234 - H 90 -9.9 -4.32951 | overlap 2865206 ACGTTAACGAACAAA CTGTCGT CTTC ACGACAG TAGTAACGCAAAGGT MADE_02640 2865326 - 2866150 + | probable secreted protein containing HslJ-like protein TERM 2992 2866185 - 2866214 + F 74 -9.3 -3.45134 | GGCAATTTGCCCTAA GGCGAGTGAGCGT ATCC ATTCTTACTCGCC TTCTCCCTTCCTTCG TERM 2993 2866731 - 2866700 - f 91 -8.2 -5.24799 | opp_overlap 2866700 2866702 TGAGAAAGAGAAAAA TAGTTTCAACACTA TTCA TCGTATTGAAACTA TAGTTATGTATTTAT TERM 2994 2866884 - 2866869 - g 84 -7.6 -4.88918 | overlap 2866864 CGATGGCAAACAAAA GCAAAG AAGC CTTTGC AGTAACCAACCCCGC TERM 2995 2867360 - 2867349 - g 71 -7.2 -4.15788 | AACCTTCTGAAGAAA CGCC GATG GGCG CACTTAAACTTGCCG TERM 2996 2868103 - 2868117 + G 70 -10 -2.9627 | GCACCGCGTTATTCA CCAGCT TGA AGCTGG TATCTGCTGGATTAA MADE_02641 2866814 - 2868280 + | NAD+-dependent betaine aldehyde dehydrogenase TERM 2997 2868440 - 2868423 - g 74 -7.1 -4.36914 | GTGGCTCTGATAAAA GCATTTT TATC AAAATGC CAACAGCGCTGTCTA MADE_02642 2868296 - 2869954 + | choline dehydrogenase TERM 2998 2870003 - 2869979 - f 91 -12.9 -3.14931 | opp_overlap 2869971 TCTATTTTGCACCAA TGCGCTTGTAG TTA CTTCAAGCGCA TCATCCACAGTGCCT MADE_02643 2870120 - 2871337 + | putative quaternary ammonium permease TERM 2999 2871364 - 2871402 + F 73 -9.7 -3.12327 | gap 1, overlap 2871362 TATCGCTTCCCACTT TTTGTTCCCATTGGCTCA GTAA TGAGCCAACGGGG-CAAG TCTTGCCTATCGGAA MADE_02644 2871480 - 2872202 + | putative periplasmic protein TERM 3000 2872262 - 2872291 + T 93 -10.8 -4.97402 | opp_overlap 2872261 AAGCATAAAGTTAAC GCGTGCGCAT GCCGTTATTA ATGCGCACGC TTTTTATGGCTTTTC MADE_02645 2873293 - 2872334 - | methyltransferase TERM 3001 2873052 - 2873040 - G 70 -4.7 -4.39998 | overlap 2873041 GATTGATATAATAAA TCGGC AAT GCCGT GAATATAGTCGGCTC MADE_02646 2873458 - 2873300 - | transcriptional regulator, MerR family TERM 3002 2874538 - 2874525 - g 88 -8.1 -4.84017 | AAGCCCGGAGAAAAA GACGC ACCA GCGTC ACTCAAAAATGCGCT MADE_02647 2873685 - 2874947 + | Xaa-Pro aminopeptidase family enzyme TERM 3003 2875093 - 2875038 - T 100 -15 -4.61868 | gap 1, overlap 2875040 2875046 GACTGAGAGATAAAA TTTGTAAAGTGTCA-GGCCTTTCGCCT TTT AAGCGAAAGGCCATGAAACTGTACATA GAATTAGCAGTAGGT TERM 3004 2875091 - 2875040 - T 100 -17.6 -2.61116 | gap 1, overlap 2875038 2875046 CTGAGAGATAAAATT TGTAAAGTGTCA-GGCCTTTCGCCT TTT AAGCGAAAGGCCATGAAACTGTACA TAGAATTAGCAGTAG TERM 3005 2875085 - 2875046 - T 100 -15.2 -3.67737 | gap 1, overlap 2875040 2875038 GATAAAATTTGTAAA GTGTCA-GGCCTTTCGCCT TTT AAGCGAAAGGCCATGAAAC TGTACATAGAATTAG MADE_02648 2875481 - 2875128 - | hypothetical protein MADE_02649 2875517 - 2876131 + | K+-dependent Na+/Ca+ exchanger related-protein TERM 3006 2876185 - 2876214 + T 86 -12.2 -3.31144 | opp_overlap 2876180 2876179, overlap 2876180 TTTAAGAAATGCCTG TCGAGGCTTGCC TTACCC GCCAAGCCTCGA TTATCAAACTCACAC MADE_02650 2876745 - 2876257 - | hypothetical protein MADE_02651 2876973 - 2876824 - | hypothetical protein TERM 3007 2876889 - 2876899 + g 90 -6.8 -5.27923 | TGGCGACATGTAATT CGCT TGA AGCG TTTTTTATAAACTTC MADE_02652 2877080 - 2878477 + | asparaginyl-tRNA synthetase TERM 3008 2878506 - 2878531 + F 100 -13.3 -5.76237 | opp_overlap 2878506 ACTAATGAAATGAAA GCTCGCTACAG TCTA CTGTCGCGAGC TTTTTTATTTCTCTA TERM 3009 2878531 - 2878506 - f 100 -13.3 -4.15201 | opp_overlap 2878506 ACTAATGAAATGAAA GCTCGCTACAG TCTA CTGTCGCGAGC TTTTTTATTTCTCTA MADE_02653 2878553 - 2878978 + | probable oxidoreductase yajO1 MADE_02654 2880072 - 2879029 - | hypothetical protein TERM 3010 2879115 - 2879129 + g 73 -2.1 -5.22039 | AGTAAACAAAGCCCT CATCG TTATC TGATG TTTTTTCAATTTGCA MADE_02655 2880227 - 2881369 + | integral membrane protein, PqiA family TERM 3011 2881963 - 2881938 - g 70 -9.7 -3.09671 | opp_overlap 2881938 2881961 AGGCGAATTTGAAGA CGCGACCTTCA ACAT TGAAGAGCGCG TGGTGTATTACGACG MADE_02656 2881351 - 2883018 + | putative paraquat-inducible protein B MADE_02657 2883198 - 2883806 + | hypothetical protein TERM 3012 2883912 - 2883870 - g 71 -6.8 -4.04579 | opp_overlap 2883886 GCTACAAAGATGAAA CCAACCGCCGCATTATGGTT GTT AACCTGTTTGCAGCGGTGGG GATGTCTATTACGTT TERM 3013 2884619 - 2884608 - g 71 -7.2 -4.14472 | overlap 2884609 CTAACATTTTCAAAA CCCG CTCG CGGG GTCAAGACGTCTTGG MADE_02658 2883809 - 2884909 + | GGDEF domain protein TERM 3014 2886161 - 2886151 - g 76 -8.2 -4.12456 | opp_overlap 2886130, overlap 2886142 AGAGTACCCGCAAAA CGGG ATG CCCG TGAAGGTAATTGAGA MADE_02659 2885072 - 2886211 + | putative multidrug resistance protein TERM 3015 2888648 - 2888606 - g 82 -5.4 -5.18726 | opp_overlap 2888604, overlap 2888608 GCCCTAGAAGAAAAA CCCGGCATTAGCTACATTCG CCG CGAAGGTGGCTACCGCAGCG TATACATTTGGGGCA MADE_02660 2886221 - 2889391 + | putative multidrug resistance protein, AcrB/AcrD/AcrF family TERM 3016 2889434 - 2889451 + F 100 -9.9 -5.62219 | opp_overlap 2889434 ACTGTTACGTAAAAA TGAGCCT TTGA AGGCTCA TTTTTTTCATGTATT TERM 3017 2889451 - 2889434 - f 93 -9.9 -4.66163 | opp_overlap 2889434 ACTGTTACGTAAAAA TGAGCCT TTGA AGGCTCA TTTTTTTCATGTATT TERM 3018 2889675 - 2889685 + G 73 -4.6 -4.7923 | opp_overlap 2889664 CAATGATGCCCCTAT TGGC TTC GCCG TTTATTTCTTTAACT MADE_02661 2889481 - 2889969 + | putative N-acetyltransferase TERM 3019 2890145 - 2890111 - T 73 -6.7 -4.20712 | gap 1, opp_overlap 2890118, overlap 2890112 2890114 2890118 TACAATACCCTAAAA TGAGAAAGCCATTC GCACACAG GAATGGCTTTCT-A TAAATATATCAATTG TERM 3020 2890143 - 2890114 - T 79 -10.9 -3.10946 | opp_overlap 2890118, overlap 2890111 2890112 2890118 AATACCCTAAAATGA GAAAGCCATTC GCACACAG GAATGGCTTTC TATAAATATATCAAT MADE_02662 2892254 - 2890173 - | putative TonB-dependent receptor MADE_02663 2893391 - 2892777 - | transcriptional regulator MADE_02664 2893590 - 2894669 + | putative multidrug resistance protein (substrate binding lipoprotein) TERM 3021 2897504 - 2897484 - g 73 -7.5 -4.03586 | opp_overlap 2897484, overlap 2897468 CTTCAAATAGAAGAA GGCTTAGCG ATA CGACAAGCC ATTGTTGAAGCGACG MADE_02665 2894673 - 2897714 + | transporter, AcrB/AcrD/AcrF family protein TERM 3022 2897772 - 2897728 - T 72 -8.6 -3.48395 | gap 1, opp_overlap 2897723, overlap 2897729 2897756 AGCGTTTGCACAGAA CGGGCCTCTCTGCTGGAATTT CCAT AAACTCCGGCAGGGAGGCT-G CTACCGTTATAGGGC TERM 3023 2897780 - 2897797 + T 77 -8.5 -3.92625 | GGAGGCTGCTACCGT TATAGGG CGTT CCCTATA TTTGATTGGCGTGTA MADE_02666 2898237 - 2897818 - | CBS domain containing membrane protein MADE_02667 2898865 - 2898368 - | hypothetical protein TERM 3024 2899548 - 2899530 - g 89 -5.2 -5.76633 | CTATATAGAAAAAAA CGGCGC GCCACAA ACGCCG GCCGATCTTAAAAAT MADE_02668 2899009 - 2899704 + | transcriptional regulator, LysR family protein MADE_02669 2899997 - 2901340 + | hypothetical protein MADE_02670 2901389 - 2901793 + | hypothetical protein MADE_02671 2901786 - 2903381 + | predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain TERM 3025 2903399 - 2903367 - T 95 -11.3 -4.87665 | opp_overlap 2903367 GCTCATTCAGAAAAA CCAAAAGCCGAGTAG ATT CAACTCGGCTCTCAG TATTAGCGCATACAT MADE_02672 2904099 - 2903533 - | cytochrome b561, putative TERM 3026 2904020 - 2904006 - G 73 -7.8 -4.03234 | TTTCCGCCATATAAA TGCCCG TTG CGAGCA TTCCAATAATGGTTA TERM 3027 2904048 - 2904030 - G 83 -10.4 -3.66018 | CGAGCATTCCAATAA TGGTTAGT CCA ACTAACCA ATGTAAAAATACAGT MADE_02673 2904643 - 2904452 - | probable oxidoreductase MED92 MADE_02674 2905084 - 2906208 + | aspartate-semialdehyde dehydrogenase TERM 3028 2906205 - 2906215 + T 79 -5.4 -4.89838 | opp_overlap 2906205, overlap 2906200 TGTGCTTGAGCAAAA CTAG TCG CTAG TTTTCTATTTATTAA TERM 3029 2906273 - 2906240 - T 83 -7.5 -4.80167 | gap 1, opp_overlap 2906240, overlap 2906235 TATTAAAAATTAAAA CGCCTTGCGCCGTG AATTGAA CACAA-GCAAGGCG TTTTTGTTGATGACG TERM 3030 2906240 - 2906273 + T 72 -3.1 -5.1356 | gap 1, opp_overlap 2906240 2906235 TATTAAAAATTAAAA CGCCTTGCGCCGTG AATTGAA CACAA-GCAAGGCG TTTTTGTTGATGACG MADE_02675 2906703 - 2906344 - | glyoxalase/dioxygenase superfamily protein TERM 3031 2907030 - 2907020 - g 74 -8.2 -3.8637 | opp_overlap 2907019 2907020, overlap 2907018 GTAGACGAGAAAAGA GCGG TCG CCGC CTTATATGTTCGCTA TERM 3032 2908060 - 2908039 - g 78 -6.7 -4.67641 | gap 1, opp_overlap 2908042 ACTCGAAAATGAAAA TAAGGCATTC GAA GAA-GCCTTA CTCCTGAAAAACGAA TERM 3033 2908128 - 2908148 + G 81 -12.7 -3.16636 | overlap 2908126 2908126 CCATCTTAGTTGCTT TGACAATGG TCA CCATTGTCA TCATTTTAATACTTT TERM 3034 2908229 - 2908213 - g 78 -5.7 -4.87133 | opp_overlap 2908213 ATCGGCCAAAGAAAA GGCCGAG CAA CACAGCC GTTTAAAGTCGGAAT MADE_02676 2906804 - 2909347 + | multi-sensor hybrid histidine kinase MADE_02677 2910577 - 2909357 - | Phosphate-selective porin O and P MADE_02678 2911710 - 2910691 - | 2-dehydropantoate 2-reductase TERM 3035 2912980 - 2912990 + G 76 -8.2 -4.15044 | AAACTTGGCCAGTAC GCCG GTG CGGC TTTCTTAGAAGCAGA MADE_02679 2912074 - 2913210 + | Patatin TERM 3036 2913206 - 2913194 - f 80 -7.7 -4.40526 | CAGACAAAAACGAAA GCAGA ATG TCTGC CTAGCACAATAGCTA TERM 3037 2913297 - 2913261 - f 77 -8.2 -4.14576 | gap 1 GTAAAAATACAACAA GCACTTAATGG-CTATC AAGC GTTAAACCATTAAGTGC CGAAAACGTAATGCA MADE_02680 2913402 - 2913836 + | adhesin-like protein TERM 3038 2913887 - 2913865 - T 91 -10.7 -4.32034 | opp_overlap 2913865, overlap 2913869 CTATTATTACCAAAA GAAACTCAC TTCAC GTGAGTTTC TTTTTTTTGCCCTGC TERM 3039 2913865 - 2913887 + T 100 -10.7 -5.78622 | opp_overlap 2913865 2913869 CTATTATTACCAAAA GAAACTCAC TTCAC GTGAGTTTC TTTTTTTTGCCCTGC TERM 3040 2913883 - 2913869 - T 75 -5.7 -4.73614 | opp_overlap 2913865, overlap 2913865 TATTACCAAAAGAAA CTCAC TTCAC GTGAG TTTCTTTTTTTTGCC TERM 3041 2913918 - 2913938 + T 76 -6.8 -4.32857 | opp_overlap 2913921, overlap 2913921 GAAGCTGGCACAAAA AAACCGGC GTAAA GCCGGTTC TTTGTATTTGGCGGA TERM 3042 2913921 - 2913935 + T 82 -8.5 -4.27843 | opp_overlap 2913921, overlap 2913918 GCTGGCACAAAAAAA CCGGC GTAAA GCCGG TTCTTTGTATTTGGC TERM 3043 2913935 - 2913921 - T 100 -8.5 -5.60993 | opp_overlap 2913921 2913918 GCTGGCACAAAAAAA CCGGC GTAAA GCCGG TTCTTTGTATTTGGC TERM 3044 2914158 - 2914176 + T 76 -7.4 -4.18018 | GCTTATAAAACGTGC GCTAAAGG CCA CCTTTTGC TTTTAACTCGGCCGA MADE_02681 2915196 - 2914159 - | quinolinate synthetase TERM 3045 2916031 - 2916015 - R 90 -5.1 -5.63645 | opp_overlap 2916015 CTAAAATATAAAAAA GCCTCTT TAA AAGANGC TTTGTTCATTACNAG TERM 3046 2916165 - 2916223 + r 76 -9 -3.73783 | AGCAATGACCCTAAT TTCAATAATGCATCTGGGCGCTTTGTCG AAT CGGTAAAGCGATTAGCTACAATATTGAA TTGTTCGCTTGCCTC MADE_02682 2916800 - 2916270 - | Tetratricopeptide TPR_2 TERM 3047 2916775 - 2916799 + g 82 -7 -4.88711 | opp_overlap 2916776, overlap 2916776 2916798 GCGGTAGAAACAGCA AGGGCGGCAC TTAAC GTGACGCCCA TTTTTAATGTCTTAT TERM 3048 2916798 - 2916776 - G 79 -10.5 -3.50335 | opp_overlap 2916775 2916776 CGGTAGAAACAGCAA GGGCGGCAC TTAAC GTGACGCCC ATTTTTAATGTCTTA TERM 3049 2916776 - 2916798 + g 79 -10.5 -3.516 | opp_overlap 2916776, overlap 2916775 CGGTAGAAACAGCAA GGGCGGCAC TTAAC GTGACGCCC ATTTTTAATGTCTTA MADE_02683 2917395 - 2916811 - | peptidoglycan-associated lipoprotein TERM 3050 2916885 - 2916897 + g 74 -3.3 -5.07486 | opp_overlap 2916885 CGTACTCAGTAGAAC CCATC ACT GCTGG TTTTTCTTCACCGTA MADE_02684 2918791 - 2917436 - | Periplasmic component of the Tol biopolymer transport system TERM 3051 2918264 - 2918252 - G 71 -6.9 -4.1552 | TATTTTGGTAAGAAA CGCGC CAC GCACG CCAGTAAGCTTTTCG MADE_02685 2919677 - 2918796 - | TolA-like protein TERM 3052 2919369 - 2919402 + g 76 -4.3 -4.91511 | CTTCTCTCGCTCTTC GGCCCGCGCCTGCGC TTCG GCTTGTGCTTGGGCC TTTTTCTGGTCGGCT MADE_02686 2920104 - 2919685 - | Biopolymer transport protein MADE_02687 2920823 - 2920134 - | tolQ protein TERM 3053 2920798 - 2920779 - G 70 -5 -4.4846 | overlap 2920780 2920781 CAATTGAACAATAAA GCTCGCTT GTAA AAACAAGC CAATAAAAGTGAGAT MADE_02688 2921211 - 2920837 - | 4-hydroxybenzoyl-CoA thioesterase TERM 3054 2921538 - 2921557 + H 100 -15 -5.86061 | ACACTTGTTGTTTTA GCCCGCTC ACTT GAGCGGGC TTTTTTTTGCTCAGC TERM 3055 2921689 - 2921670 - g 91 -7.1 -5.58454 | GCCATACCAAAAAAA GCCCAGC AATCCA GCTAGGC TTAAAAGATGAACGT MADE_02689 2921594 - 2921716 + | hypothetical protein MADE_02690 2922735 - 2921731 - | Holliday junction DNA helicase RuvB TERM 3056 2922798 - 2922815 + r 71 -6.3 -4.14392 | gap 1, overlap 2922811 AGCCACCTTCACTGT GC-GCCAT TAA ATGGCCGC TTTTAGCGCTTCGCG MADE_02691 2923424 - 2922804 - | Holliday junction DNA helicase motor protein TERM 3057 2924280 - 2924292 + G 70 -9.1 -3.40522 | opp_overlap 2924280 TTCCAAGCGGAAAAA GAGCG AAT CGCTC TTGTGGTGGACGAAT TERM 3058 2924292 - 2924280 - g 89 -9.1 -4.66833 | opp_overlap 2924280 TTCCAAGCGGAAAAA GAGCG AAT CGCTC TTGTGGTGGACGAAT MADE_02692 2923494 - 2924678 + | hypothetical protein MADE_02693 2924889 - 2924689 - | hypothetical protein MADE_02694 2925538 - 2925011 - | Phosphohistidine phosphatase SixA (RX6) TERM 3059 2926136 - 2926121 - g 82 -3.2 -5.5074 | opp_overlap 2926123 GAATTTAAGAAAAAA GATGAC CTCC GTCGTC TGTACCAAATTCACA TERM 3060 2927934 - 2927944 + G 90 -6.8 -5.28481 | TATTGGAGCAAATGC TGGC GGC GCCA TTTTTTAATTCACTA TERM 3061 2928228 - 2928240 + G 73 -7.7 -4.07568 | overlap 2928220 GGGTTAGTTTGGGAA CCCAA GAT TTGGG TTTTAACCGCAACAC MADE_02695 2925698 - 2928445 + | peptidase, M16 family protein MADE_02696 2928736 - 2928602 - | hypothetical protein TERM 3062 2928652 - 2928641 - Gf 79 -5.8 -4.89605 | TAAAAAAATAATAAA TGGC GTAA GCCA AAGGTGTTTAGGTGC TERM 3063 2932147 - 2932122 - gH 82 -7.6 -4.60487 | opp_overlap 2932121 2932131 CATTACGGGTAAAAA CGCCACCT GTTATCGCTT AGGTGGCG ATGAATTTAGTATAT MADE_02697 2928688 - 2933220 + | sensory box protein MADE_02698 2933519 - 2933686 + | hypothetical protein TERM 3064 2933716 - 2933731 + T 100 -9 -5.76633 | opp_overlap 2933716 GATTTTCAAAAAAAA GAGAGC CTCT GCTCTC TTTTTTTATATCTGG TERM 3065 2933731 - 2933716 - T 100 -9 -5.76949 | opp_overlap 2933716 GATTTTCAAAAAAAA GAGAGC CTCT GCTCTC TTTTTTTATATCTGG MADE_02699 2933985 - 2933788 - | hypothetical protein TERM 3066 2934174 - 2934160 - R 100 -12.8 -5.64274 | opp_overlap 2934160 TCAGGCACAAAAAAA CCGGGC TAA GCCCGG TTTTTAACATTTTAT TERM 3067 2934160 - 2934174 + r 100 -12.8 -4.75063 | opp_overlap 2934160 TCAGGCACAAAAAAA CCGGGC TAA GCCCGG TTTTTAACATTTTAT MADE_02700 2936353 - 2934194 - | Fatty oxidation complex, alpha subunit TERM 3068 2936054 - 2936044 - G 74 -6.8 -4.19704 | opp_overlap 2936050 CAATTCTATCGAAAA TGGC TTG GCCA CCAGCAGCAATGGTG MADE_02701 2937665 - 2936355 - | acetyl-CoA acetyltransferase TERM 3069 2937232 - 2937249 + g 80 -5.5 -5.03314 | overlap 2937233 GTTTTCTGTAAGTCT ACTAGCG CGCG CGCTAGA TTTTTTGACACTCCA TERM 3070 2937233 - 2937248 + g 72 -9 -3.61506 | overlap 2937232 TTTTCTGTAAGTCTA CTAGCG CGCG CGCTAG ATTTTTTGACACTCC TERM 3071 2938407 - 2938397 - g 76 -8.2 -4.08706 | GGCCGATGAGATAAA CCGG GCA CCGG CAAAAGTTCAGTCAG TERM 3072 2938553 - 2938565 + G 71 -3.3 -4.73388 | CCCTCTTCCTGAAGC GCAGT TAG ACCGC TTTTTAATGCACGTT MADE_02702 2938077 - 2939033 + | putative ATPase family protein TERM 3073 2939404 - 2939391 - g 70 -5.2 -4.386 | CAACTGCTGACAAAA GCGG TTCAAG CCGC TCACGTATCGTCGCT MADE_02703 2939037 - 2940011 + | hypothetical protein MADE_02704 2940011 - 2940679 + | hypothetical protein TERM 3074 2941373 - 2941385 + G 77 -3.4 -5.14965 | opp_overlap 2941373 GGGCGCCGATAAAAT GCTT ATTCA AAGC TTTTTTGGTAGCCGT TERM 3075 2941561 - 2941575 + G 77 -3.4 -5.14563 | opp_overlap 2941550 AAACCCGCAAGATGC GTCCGC TAA GCGCGC TTTTTTACTACCCAC MADE_02705 2940672 - 2941721 + | von Willebrand factor, type A TERM 3076 2942271 - 2942282 + G 71 -7.2 -4.07568 | opp_overlap 2942271 TTTTAGGTATCGAAA GCGC CGCA GCGC TTTTAACCAACGCGG MADE_02706 2941721 - 2943724 + | TPR domain protein MADE_02707 2943773 - 2945533 + | batD protein TERM 3077 2945592 - 2945645 + F 100 -22.9 -2.52543 | GCGTCACTACCACCA TGCTCCTTTTAACGGTAAAGCCTAA CTAC TTAAGGTTTACCGTTAAAAGGAGCA TGGCTTAAACAACAT TERM 3078 2945787 - 2945767 - g 75 -9.7 -3.64192 | opp_overlap 2945786, overlap 2945780 AAAAACACTGTTAAA GCTAACGCC AAT AGCGCTAGC CATTACCACTTTAAC TERM 3079 2945876 - 2945864 - g 74 -3.3 -4.93595 | overlap 2945865 ATAAAAACTGAAAAA CCTGC TGG GCAGT CTGAGTCTGAGCGGC MADE_02708 2945747 - 2947600 + | hypothetical protein TERM 3080 2947616 - 2947594 - f 78 -2.7 -5.47821 | opp_overlap 2947597, overlap 2947597 AGCCATGCAAAAAAA TAAGTAGCG CTATT CACTACTTT TTAGCTTTACCTAAA TERM 3081 2947613 - 2947597 - f 72 -4.4 -4.8236 | opp_overlap 2947597, overlap 2947594 CATGCAAAAAAATAA GTAGCG CTATT CACTAC TTTTTAGCTTTACCT TERM 3082 2947636 - 2947663 + F 100 -11.4 -5.26316 | gap 1, opp_overlap 2947636 CTTTACCTAAAAAAA CGCGTC-TTTCGT TTA GCGAAATGACGCG TTTTTTATGCCATAG TERM 3083 2947663 - 2947636 - f 100 -10.7 -5.47218 | gap 1, opp_overlap 2947636 CTTTACCTAAAAAAA CGCGTC-TTTCG TTTAG CGAAATGACGCG TTTTTTATGCCATAG MADE_02709 2947709 - 2948266 + | RNA polymerase sigma-70 factor MADE_02710 2948259 - 2948963 + | hypothetical protein TERM 3084 2949013 - 2948997 - f 79 -5.1 -5.00884 | opp_overlap 2948997 ATTCGTTCCAAAAAA GTGCTTA TCT TATGCAC TTCCCTTCTTCGGCC TERM 3085 2949023 - 2949040 + F 100 -12.7 -5.40072 | ATGCACTTCCCTTCT TCGGCCC ACTC GGGCCGA TTTTTTTACCCAAAA MADE_02711 2949311 - 2951128 + | response regulator receiver modulated diguanylate cyclase MADE_02712 2951268 - 2952749 + | proline/sodium symporter TERM 3086 2952810 - 2952785 - f 95 -11.9 -4.24326 | opp_overlap 2952785 AAACAGCATTTAAAA GCCCTGTTTAG GTAA CTAAGCAGGGC TTTTTTCTTTTTCCC TERM 3087 2952785 - 2952810 + F 100 -14.1 -5.93252 | opp_overlap 2952785 AAACAGCATTTAAAA GCCCTGTTTAG GTAA CTAAGCAGGGC TTTTTTCTTTTTCCC MADE_02713 2953034 - 2953918 + | 3-phosphoadenosine 5-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzyme TERM 3088 2954373 - 2954362 - g 73 -2.2 -5.24129 | gap 1, opp_overlap 2954370 GGCTTGTACAAAAAA GCACG TAG CG-GC GAAATCAAGGACTTC MADE_02714 2953918 - 2954514 + | adenylylsulfate kinase MADE_02715 2954514 - 2955305 + | putative PAP (3,5 adenosine diphosphate) 3 phosphatase MADE_02716 2955307 - 2956722 + | bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase protein TERM 3089 2956900 - 2956919 + G 76 -5 -4.89562 | opp_overlap 2956900 GCTAAATTTAACAAA CAAGGG CCTTATCA CCCTTG TTTTGTTGCTTTTAG TERM 3090 2958407 - 2958396 - g 73 -4.4 -4.8667 | opp_overlap 2958396 CACATTTCATAAAAA TAGG CCTG CCTA TTTCCATTGTATACA MADE_02717 2956739 - 2958463 + | putative transporter TERM 3091 2958464 - 2958507 + F 76 -6.8 -4.3586 | opp_overlap 2958474 2958477, overlap 2958474 2958477 GTGACTTACCTTTAG TTGCGATAAATAAGAGGAGC CAAG GCTCCTCTTATTCGTTGTGC TTTTCGTGTAGGTAC TERM 3092 2958474 - 2958497 + F 95 -14 -3.53814 | opp_overlap 2958474 2958477, overlap 2958464 2958477 TTTAGTTGCGATAAA TAAGAGGAGC CAAG GCTCCTCTTA TTCGTTGTGCTTTTC TERM 3093 2958497 - 2958474 - f 100 -14 -3.86897 | opp_overlap 2958464 2958474 2958477, overlap 2958477 TTTAGTTGCGATAAA TAAGAGGAGC CAAG GCTCCTCTTA TTCGTTGTGCTTTTC TERM 3094 2958477 - 2958494 + F 90 -11.3 -3.87584 | opp_overlap 2958474 2958477, overlap 2958474 2958464 AGTTGCGATAAATAA GAGGAGC CAAG GCTCCTC TTATTCGTTGTGCTT TERM 3095 2958494 - 2958477 - f 90 -11.3 -4.06687 | opp_overlap 2958477 2958474 2958464, overlap 2958474 AGTTGCGATAAATAA GAGGAGC CAAG GCTCCTC TTATTCGTTGTGCTT MADE_02718 2958685 - 2959422 + | hypothetical protein MADE_02719 2960449 - 2959556 - | probable putative transmembrane protein MADE_02720 2960520 - 2962187 + | putative Glutamate carboxypeptidase II TERM 3096 2962256 - 2962235 - T 79 -10.1 -3.54459 | opp_overlap 2962237, overlap 2962237 CTAACGCTCGCTAAA TAGGGCCTC AGAT GAGGCCCTT TTCATTCGTTCGGCT TERM 3097 2962237 - 2962254 + T 100 -12.7 -4.4959 | opp_overlap 2962235 2962237 AACGCTCGCTAAATA GGGCCTC AGAT GAGGCCC TTTTCATTCGTTCGG TERM 3098 2962254 - 2962237 - T 87 -12.7 -3.34894 | opp_overlap 2962237, overlap 2962235 AACGCTCGCTAAATA GGGCCTC AGAT GAGGCCC TTTTCATTCGTTCGG MADE_02721 2963070 - 2962288 - | hypothetical protein TERM 3099 2962667 - 2962687 + g 71 -3.9 -4.78753 | opp_overlap 2962658 2962669, overlap 2962669 GGTAAATGCGCATAG GACGCAATA GTT TCTTGCGCC TTTTCTTCATATTCA TERM 3100 2963054 - 2963042 - G 74 -3.3 -4.92757 | opp_overlap 2963043, overlap 2963043 2963044 TCAGGAATAATAAAA GCCGA CAC TCGGT CGTTAGAAATGTGCA TERM 3101 2964803 - 2964825 + G 76 -9.2 -3.72576 | GACGGTGTAGGTTAC TCGTGGATTG ACT CAATTCGCGA TTTCGTGGAAAACGA MADE_02722 2963420 - 2965090 + | asparagine synthetase B TERM 3102 2965117 - 2965146 + T 95 -13.7 -3.32867 | opp_overlap 2965124, overlap 2965124 GGTAAACATCTTCAT AAAAAAACGCGGC AGTT GCCGCGTTTTTTC TCTATTGGTTTTTTA TERM 3103 2965139 - 2965124 - T 100 -11.8 -5.61596 | opp_overlap 2965124 2965117 ATCTTCATAAAAAAA CGCGGC AGTT GCCGCG TTTTTTCTCTATTGG TERM 3104 2965124 - 2965139 + T 100 -11.8 -5.47431 | opp_overlap 2965124, overlap 2965117 ATCTTCATAAAAAAA CGCGGC AGTT GCCGCG TTTTTTCTCTATTGG MADE_02723 2966068 - 2965148 - | ABC-type amino acid transport/signal transduction system,periplasmic component/domain MADE_02724 2966743 - 2966069 - | radical activating enzyme TERM 3105 2967133 - 2967147 + G 74 -7.2 -4.27467 | CAGTTGTCCCTAATC GCAATA TGA TATTGC TTTCTCTTGCTGTTG MADE_02725 2966838 - 2967494 + | putative regulator protein MADE_02726 2968541 - 2967615 - | transcriptional regulator, LysR family protein TERM 3106 2968736 - 2968788 + r 81 -11.5 -2.94356 | gap 1, opp_overlap 2968735 2968738, overlap 2968734 ATACAGGGTAAAAGG TAGTGCTG-ATGTGGGTTATCCGT TTATAT ACGGATAGCCCACATACAGGGCGA TACTATTATTTTAAG TERM 3107 2968786 - 2968738 - R 71 -9.7 -2.75845 | gap 1, opp_overlap 2968736 2968734, overlap 2968735 ACAGGGTAAAAGGTA GTGCTG-ATGTGGGTTATCCGT TTATAT ACGGATAGCCCACATACAGGGC GATACTATTATTTTA MADE_02727 2970822 - 2968807 - | excinuclease ABC subunit B MADE_02728 2972312 - 2970930 - | MATE efflux family protein TERM 3108 2971032 - 2971001 - G 71 -3.8 -4.84602 | gap 1, overlap 2971003 2971005 AGACAAACAAAGAAA CACATGCCATTGCAA CAT TGGCAATGACA-GTA CCTGCGAATAATCCC TERM 3109 2971469 - 2971488 + g 70 -10.6 -2.53263 | TACCCACTCCCCACG CGGCGACG GCTT CGGCGCCG TAGCTTGCGACTACC MADE_02729 2973169 - 2973750 + | Na(+)-translocating NADH-quinone reductase subunit E TERM 3110 2973790 - 2973807 + G 79 -9.1 -4.17523 | TTGCCGTTATCGCTA TCGGGGC ACTT GCCCTGA TTTTCGGCCTTGTTT MADE_02730 2973750 - 2974331 + | electron transport complex protein RnfB TERM 3111 2975462 - 2975421 - g 73 -2.4 -5.1356 | TTCCAGTAATAAAAA CCACTAACTGTTTATTAG TTCCTG CAAAAAAAGAGTTAGTAG ACGACAATGCCGAGC TERM 3112 2976540 - 2976527 - g 83 -4.5 -5.31275 | gap 1 GCTGACGAGAAAAAA GCACGC ATT GCG-GC TGCCGTAGCGAAAGC TERM 3113 2976645 - 2976632 - g 83 -4.5 -5.31275 | gap 1 GCTGACGAGAAAAAA GCACGC ATT GCG-GC TGCCGTAGCGAAAGC MADE_02731 2974337 - 2976895 + | electron transport complex protein RnfC TERM 3114 2977436 - 2977424 - g 73 -7.7 -4.14739 | TTACTCAGCTTAAAA CCATC GCA GATGG GGTTACGATGGCGAC MADE_02732 2976952 - 2977980 + | putative RnfD-related protein MADE_02733 2977977 - 2978750 + | electron transport complex protein RnfG MADE_02734 2978753 - 2979445 + | NADH-ubiquinone oxidoreductase TERM 3115 2980043 - 2980026 - g 78 -6.3 -4.64861 | TGTTCCCAAAAGAAA GATGGAA CGAC CTCCATC TCCAAATAATCCTGT MADE_02735 2979491 - 2980204 + | Endonuclease III/Nth MADE_02736 2980238 - 2981653 + | aminopeptidase MADE_02737 2982206 - 2981937 - | hypothetical protein MADE_02738 2982467 - 2982255 - | putative Cold shock-like protein MADE_02739 2982946 - 2983347 + | glyoxalase I, nickel isomerase (Lactoylglutathione lyase) MADE_02740 2983452 - 2984636 + | putative glycerophosphoryl diester phosphodiesterase MADE_02741 2985602 - 2984730 - | sodium-type flagellar protein MotY TERM 3116 2986326 - 2986312 - g 90 -7.1 -5.4477 | AAAGGCGCAAAAAAA CGCTG GTTGT CAGCG CTCGGTGATTGTTGC MADE_02742 2985992 - 2986624 + | ribonuclease T TERM 3117 2986725 - 2986696 - T 80 -10.1 -3.69621 | opp_overlap 2986702, overlap 2986702 ATTTATAAGCTCAAA CAAAAACAGCGCC TAAA AGCGCTGTTTTTT CTACTCTTCAAGTAG TERM 3118 2986702 - 2986719 + T 95 -8.4 -5.36965 | opp_overlap 2986696 2986702 AAGCTCAAACAAAAA CAGCGC CTAAAA GCGCTG TTTTTTCTACTCTTC TERM 3119 2986719 - 2986702 - T 93 -9.1 -5.29846 | opp_overlap 2986702, overlap 2986696 AAGCTCAAACAAAAA CAGCGCC TAAA AGCGCTG TTTTTTCTACTCTTC MADE_02743 2987351 - 2986746 - | antioxidant, AhpC/Tsa family protein TERM 3120 2987409 - 2987389 - H 71 -7.5 -3.8372 | ATTGTAATAATAGAA GTGATTGCG TTG CGCGACCAC TTAAAATAGATATTG MADE_02744 2987639 - 2987821 + | bacterioferritin-associated ferredoxin MADE_02745 2990986 - 2987939 - | putative TonB-dependent outer membrane receptor MADE_02746 2992141 - 2991086 - | putative regulatory protein MADE_02747 2992775 - 2992143 - | putative RNA polymerase sigma-70 factor FecI TERM 3121 2992503 - 2992522 + g 71 -7.2 -4.13728 | gap 1 TTTAGCAACATGGTT CAGCGC-TA GGT TACGCGCTG TTTTAAGCATATATG TERM 3122 2992805 - 2992822 + r 85 -12.7 -3.17194 | opp_overlap 2992805 AATAAGAAAATAAAA GGGGAGC TAAT GCTCCCC TTCACTTCGAAACAT TERM 3123 2992822 - 2992805 - R 100 -12.7 -5.33124 | opp_overlap 2992805 AATAAGAAAATAAAA GGGGAGC TAAT GCTCCCC TTCACTTCGAAACAT MADE_02748 2995440 - 2992870 - | putative TonB-dependent outer membrane receptor TERM 3124 2993248 - 2993230 - G 71 -9.6 -3.19026 | CATGCGAATACGGAA GTCAGAGA TAT TCTCCGAC GCACGGTCTACTTCT TERM 3125 2995748 - 2995734 - R 100 -8.5 -5.63103 | opp_overlap 2995734 2995733 TTTTAATGAAAAAAA CCGGC ACAAG GCCGG CTTTCTAATCGTCAT MADE_02749 2996149 - 2995799 - | putative glutaredoxin like protein MADE_02750 2996498 - 2997079 + | iron superoxide dismutase TERM 3126 2997159 - 2997140 - f 91 -12.1 -4.02979 | opp_overlap 2997140, overlap 2997129 AAAATACGAACGAAA GCCCCGC ATATCA GCGGGGC TTTTTTTGTTGTGTT TERM 3127 2997140 - 2997159 + F 100 -12.1 -5.94214 | opp_overlap 2997129 2997140 AAAATACGAACGAAA GCCCCGC ATATCA GCGGGGC TTTTTTTGTTGTGTT MADE_02751 2997319 - 2999241 + | putative serine protein kinase, PrkA TERM 3128 2999772 - 2999719 - g 81 -4.7 -5.10208 | gap 1, opp_overlap 2999733, overlap 2999720 2999736 TAATTTGAAGAAAAA CCAATTTGATAAAGTCACGCAGTATG AAA CCTACCGCGCGGGTT-ATCAAACTGA TGGCGTGCCAAGTAA TERM 3129 3000493 - 3000473 - g 78 -5.4 -4.87626 | opp_overlap 3000473 CGTGAATACGAAAAA GTTGCCGC TACTC ACGACAAC TTTGTATGTAAGCAC MADE_02752 2999303 - 3000589 + | hypothetical protein TERM 3130 3001383 - 3001418 + G 71 -7 -4.03995 | gap 1, overlap 3001381 3001383 CTAGAGCCTTGGCAG C-GTGAAATTGTGCGTA TTG TGCGCAAAGTTTCACAG TATTTTTATCCGCAG MADE_02753 3000591 - 3002138 + | SpoVR TERM 3131 3002152 - 3002121 - T 82 -10.8 -3.60805 | opp_overlap 3002122 3002127, overlap 3002122 ATATCGGAGTGTAAA CGCACACCGCAGGC TTGA GCCTGCGGTTTACT TTTTTTCAATAGCTG TERM 3132 3002122 - 3002151 + T 100 -12.1 -5.47821 | opp_overlap 3002122 3002121, overlap 3002127 TATCGGAGTGTAAAC GCACACCGCAGGC TTGA GCCTGCGGTTTAC TTTTTTTCAATAGCT TERM 3133 3002151 - 3002122 - T 93 -14.3 -2.76162 | opp_overlap 3002122 3002127, overlap 3002121 TATCGGAGTGTAAAC GCACACCGCAGGC TTGA GCCTGCGGTTTAC TTTTTTTCAATAGCT TERM 3134 3002127 - 3002146 + T 100 -15 -4.5187 | opp_overlap 3002122 3002121, overlap 3002122 GAGTGTAAACGCACA CCGCAGGC TTGA GCCTGCGG TTTACTTTTTTTCAA MADE_02754 3003385 - 3002168 - | major facilitator superfamily MFS_1 TERM 3135 3002966 - 3002914 - G 71 -7.1 -4.04206 | gap 1, opp_overlap 3002919, overlap 3002919 CTACCGTCATACAAA TAAAACCAACGCTTCCCCACAGCC TTATTT GGCCGTA-GGTAGCCTTGGTTTTC GCCACCGTGTTCATG TERM 3136 3002961 - 3002919 - G 85 -7 -5.05113 | gap 1, opp_overlap 3002919, overlap 3002914 GTCATACAAATAAAA CCAACGCTTCCCCACAGCC TTATTT GGCCGTA-GGTAGCCTTGG TTTTCGCCACCGTGT TERM 3137 3003435 - 3003408 - R 88 -8.4 -4.70659 | gap 1 CTCCATATGCAAAAA CGCCACTAGCGCA AAA CGGGC-AGTGGCG AATAGTGAGAATATT MADE_02755 3004629 - 3003532 - | chorismate synthase TERM 3138 3003666 - 3003678 + g 76 -9.1 -3.74251 | opp_overlap 3003665 3003666 GAATACCCACACAAG GGTCG TGA CGACC TTTGGTAACAATATC TERM 3139 3004275 - 3004287 + g 71 -3.3 -4.77438 | CACCACCGCGATAGT CACGG CTA CCGTA TTTTTGATCGTAGGT MADE_02756 3005589 - 3004639 - | putative adenine-specific methylase MADE_02757 3005727 - 3006377 + | Smr protein/MutS2 MADE_02758 3006521 - 3006408 - | hypothetical protein MADE_02759 3007135 - 3006716 - | hypothetical protein MADE_02760 3007563 - 3007231 - | hypothetical protein MADE_02761 3007636 - 3007755 + | hypothetical protein TERM 3140 3007927 - 3007954 + T 100 -18.6 -5.66229 | TTGGCTTAGCGTCGC TGGGGGATAGAC GCCC GTCTATCCCCCA TTTTTTCTTATTCCT TERM 3141 3008025 - 3008065 + T 85 -8.4 -4.45168 | gap 1, opp_overlap 3008036, overlap 3008026 ATGCTTTTTATCAGT G-GCATAAAAAACGCGACT TCGA AGTCGCGCTTTGTGTGCTC TTTATCTTTTCAGCA TERM 3142 3008026 - 3008063 + T 91 -12.1 -3.82656 | opp_overlap 3008036, overlap 3008025 TGCTTTTTATCAGTG GCATAAAAAACGCGACT TCGA AGTCGCGCTTTGTGTGC TCTTTATCTTTTCAG TERM 3143 3008053 - 3008036 - T 100 -11.3 -5.252 | opp_overlap 3008026 3008025 CAGTGGCATAAAAAA CGCGACT TCGA AGTCGCG CTTTGTGTGCTCTTT MADE_02762 3008730 - 3008092 - | putative lipoprotein TERM 3144 3008785 - 3008804 + r 100 -12.2 -6.06723 | CCTGGAACCCTTCGA TGCCTGAC TTAT GTCAGGCA TTTTTTTTTGCAGGA MADE_02763 3010396 - 3008798 - | glutamate cysteine ligase TERM 3145 3010415 - 3010446 + r 70 -9.5 -2.52464 | opp_overlap 3010420, overlap 3010420 GGTGGTCCGTTATGT CAATATTGCCCCT GTTATG GGGGGCAATAGTG TAAATTCAACAAAAA MADE_02764 3013307 - 3010470 - | putative metallopeptidase, M16 family protein TERM 3146 3011370 - 3011390 + g 76 -8.9 -3.67634 | overlap 3011369 AATAAGATCTCGTGC CCGTCGTGC TAA GCTCGATGG TGTTTTCGCCTGCTG TERM 3147 3011490 - 3011474 - G 72 -5.2 -4.57341 | AAGCGGGGTTAAAAA GCTTTT CTTTT AAAAGC GCTAAGGTTTCATCT MADE_02765 3013488 - 3013616 + | hypothetical protein MADE_02766 3013643 - 3014203 + | histidine kinase TERM 3148 3014379 - 3014365 - g 73 -4.2 -4.84017 | AATGCTGCACAAAAA GAAAGC TCA GCTTGC AAAGGCGAAGATACG MADE_02767 3014203 - 3015042 + | tRNA pseudouridine synthase A TERM 3149 3015951 - 3015926 - g 100 -9.7 -5.29846 | opp_overlap 3015926 AATGGCAAAGAAAAA GGGTATCCCCG TTCC CGAGAACACCC TTTTGGTAGAGCGTG MADE_02768 3015045 - 3015986 + | 2-dehydropantoate 2-reductase MADE_02769 3017655 - 3016087 - | lysyl-tRNA synthetase TERM 3150 3017033 - 3017023 - G 74 -8.2 -3.91897 | GTGGTGAGTGACAAA CGGC TTC GCCG TCGCGCCACCTGGAA MADE_02770 3018527 - 3017679 - | Protein chain release factor B, RF-2 MADE_02771 3019080 - 3019331 + | hypothetical protein TERM 3151 3019542 - 3019593 + F 100 -14.8 -4.46432 | gap 1, opp_overlap 3019542 3019543, overlap 3019543 TCTTGACGCAGAAAA T-TTTAAGCTTACACTTGTGCGCTG AAT CAGCGTACAACTGTACGCTTAAATA TTTTGATCATTTTTT TERM 3152 3019592 - 3019542 - f 100 -14.2 -4.42386 | opp_overlap 3019542 3019543, overlap 3019543 TCTTGACGCAGAAAA TTTTAAGCTTACACTTGTGCGCTG AAT CAGCGTACAACTGTACGCTTAAAT ATTTTGATCATTTTT TERM 3153 3019591 - 3019543 - f 100 -17.7 -3.2511 | opp_overlap 3019542 3019543, overlap 3019542 CTTGACGCAGAAAAT TTTAAGCTTACACTTGTGCGCTG AAT CAGCGTACAACTGTACGCTTAAA TATTTTGATCATTTT TERM 3154 3019543 - 3019591 + F 100 -19.9 -3.80437 | opp_overlap 3019543 3019542, overlap 3019542 CTTGACGCAGAAAAT TTTAAGCTTACACTTGTGCGCTG AAT CAGCGTACAACTGTACGCTTAAA TATTTTGATCATTTT MADE_02772 3019726 - 3020709 + | putative Oxidoreductase TERM 3155 3021332 - 3021347 + G 72 -3.2 -5.00616 | gap 1, overlap 3021333 3021334 GTCGTACCACGAAAT GGC-CGC TGA GCGGGTC TTTTTTGGAAAAAAG MADE_02773 3020706 - 3021869 + | putative fatty acid desaturase MADE_02774 3022284 - 3021847 - | hypothetical protein MADE_02775 3022283 - 3022402 + | hypothetical protein MADE_02776 3022869 - 3022399 - | putative secreted protein TERM 3156 3023269 - 3023281 + G 74 -3.3 -4.95155 | CTGTGTTGAGCGAGA GTGCC CTT GGTGC TTTTTCTGGTATCGC MADE_02777 3023121 - 3023999 + | hypothetical protein TERM 3157 3024067 - 3024096 + T 76 -7.2 -4.16943 | overlap 3024080 ACTTATCGTTTATTA GAAAATGGTCAC TTGGTT GCGGCCATTTTC TTTTGCAGTATAAAG MADE_02778 3026904 - 3024064 - | GGDEF protein MADE_02779 3028236 - 3027022 - | putative orphan protein MADE_02780 3028646 - 3029689 + | putative Pyridoxal-phosphate dependent protein TERM 3158 3029706 - 3029685 - f 70 -8.1 -3.75295 | opp_overlap 3029685 TAGAAAGTATCGAAA GCTGAATTA AAAC TAACTCAGC TGGGTTTACACTATA TERM 3159 3029827 - 3029817 - f 89 -5.4 -5.45652 | ATTTGTAATAAAAAA GCTT ACG AAGC CATGATGAAAATAAA MADE_02781 3029829 - 3030992 + | hypothetical protein TERM 3160 3031050 - 3031023 - T 79 -9.9 -3.67121 | opp_overlap 3031027, overlap 3031019 GAGAAATCAAACCAA GCAAGCCGC ACTCAATTAA GCGGCTTGC TGTCGGCACCGAACA MADE_02782 3031303 - 3031100 - | hypothetical protein TERM 3161 3031362 - 3031341 - R 85 -8.7 -4.37871 | opp_overlap 3031344, overlap 3031344 TTAAATAAAACTAAA GAAGCAGGC CTAA GCCTGCTTT AATTACACTAAGGAA TERM 3162 3031359 - 3031344 - R 89 -10.4 -4.25231 | opp_overlap 3031344, overlap 3031341 AATAAAACTAAAGAA GCAGGC CTAA GCCTGC TTTAATTACACTAAG TERM 3163 3031344 - 3031359 + r 84 -10.4 -3.91911 | opp_overlap 3031344 3031341 AATAAAACTAAAGAA GCAGGC CTAA GCCTGC TTTAATTACACTAAG MADE_02783 3032082 - 3031516 - | redicted flavoprotein TERM 3164 3031588 - 3031621 + g 72 -9 -3.63266 | gap 1, opp_overlap 3031596, overlap 3031594 TATCGTTTTTTCATC GGTAATTACGC-CGT CTTCC ACGAGCGTATTTACC TTTGCGATAGCTTTT MADE_02784 3033560 - 3032289 - | hypothetical maturase TERM 3165 3032471 - 3032487 + g 70 -10.1 -3.10112 | opp_overlap 3032449, overlap 3032474 GTCTTAGCCAGCGAT GGAGGCG GCT CGCCTTC TTCCATAACTTGAGT TERM 3166 3032474 - 3032484 + g 72 -8.2 -3.69283 | overlap 3032471 TTAGCCAGCGATGGA GGCG GCT CGCC TTCTTCCATAACTTG TERM 3167 3034233 - 3034253 + G 70 -4.7 -4.42806 | overlap 3034232 TTCGGATTATCTTCC CCTCAGTCA GGG TGATTCAGG TTTCTTTCAACCTGA TERM 3168 3034302 - 3034326 + G 84 -8.6 -4.71061 | opp_overlap 3034302 TGGGCAAACAAAAAA GGCTGACACT TCATC AATGTCAGCC TTTTTCAATATCAAT TERM 3169 3034326 - 3034302 - g 100 -10.8 -5.63517 | opp_overlap 3034302 TGGGCAAACAAAAAA GGCTGACACT TCATC AATGTCAGCC TTTTTCAATATCAAT MADE_02785 3034153 - 3034359 + | hypothetical protein MADE_02786 3036093 - 3034363 - | arginyl-tRNA synthetase MADE_02787 3037696 - 3036107 - | peptide chain release factor 3 TERM 3170 3038060 - 3038014 - H 71 -9.8 -2.82623 | opp_overlap 3038014, overlap 3038011 3038041 TTCGCCCCATAACCA TTTACTTAGCATGCTAACCA AATAAAA TACTTAGCATGCTAAATAAA TTTACAAGTATTACG TERM 3171 3038058 - 3038041 - H 70 -3.5 -4.99947 | opp_overlap 3038014, overlap 3038014 3038011 GCTAACCAAATAAAA TACTTAG CATG CTAAATA AATTTACAAGTATTA MADE_02788 3038202 - 3038531 + | putative transcriptional regulator (MarR family) protein TERM 3172 3038866 - 3038830 - g 73 -4.4 -4.77165 | gap 1, overlap 3038842 TGTGGCACAAGAAAA TGCCCAAATTGACGCCC AGGT GGACG-CAATGAAGGCA AGAATAGCAGCCGCG MADE_02789 3038567 - 3039601 + | putative efflux pump protein TERM 3173 3039880 - 3039890 + G 89 -5.4 -5.79595 | ACACCATTAATCGCA GCAA CCT TTGC TTTTTTATTTTGGCA MADE_02790 3039610 - 3040641 + | hypothetical protein MADE_02791 3041705 - 3040770 - | alcohol dehydrogenase, zinc-containing MADE_02792 3042572 - 3041736 - | probable oxidoreductase MADE_02793 3043502 - 3042594 - | monooxygenase TERM 3174 3043384 - 3043403 + g 100 -13.6 -4.4009 | opp_overlap 3043384 TGCTGTGTCATATCA GGTACGCC AAAC GGCGTACC TTTTGTGGCGTCGAA TERM 3175 3043403 - 3043384 - G 83 -13.6 -2.62184 | opp_overlap 3043384 TGCTGTGTCATATCA GGTACGCC AAAC GGCGTACC TTTTGTGGCGTCGAA MADE_02794 3043776 - 3043513 - | putative drug efflux protein (perhaps for chloramphenicol) MADE_02795 3044711 - 3043758 - | Major facilitator superfamily MFS_1 MADE_02796 3044903 - 3045802 + | putative transcriptional regulator, LysR family protein MADE_02797 3046757 - 3045810 - | hypothetical protein MADE_02798 3047059 - 3046931 - | hypothetical protein MADE_02799 3047378 - 3047082 - | putative orphan protein TERM 3176 3047448 - 3047434 - R 72 -10 -2.60496 | opp_overlap 3047445, overlap 3047433 3047431 TCTTGCTTCAAACAC GCGCTT CGT AAGCGC CTAAATAAGGCACTT MADE_02800 3048129 - 3047641 - | ribosomal-protein-alanine N-acetyltransferase MADE_02801 3048761 - 3048129 - | ribosomal-protein-alanine N-acetyltransferase MADE_02802 3049973 - 3049251 - | Choline kinase involved in LPS biosynthesis MADE_02803 3050775 - 3050131 - | transporter, putative MADE_02804 3051038 - 3050775 - | hypothetical protein MADE_02805 3053146 - 3051056 - | TonB-dependent receptor TERM 3177 3052046 - 3052066 + g 74 -11.3 -2.79915 | overlap 3052028 AAGCAGTTGCTCTTC GGTGTTTTT GTA AAAAACACC TATAGTCCAGTCGGT MADE_02806 3053860 - 3053435 - | thioesterase family protein TERM 3178 3053562 - 3053580 + g 72 -3.1 -5.01553 | opp_overlap 3053563, overlap 3053563 TTTACGAAAACAATA TCGTCTG CAAAA CAGATGG TTTTCTTTGTAGCTT TERM 3179 3053630 - 3053641 + g 71 -7.2 -4.13995 | AACAGTAATAGACGT GCGG CCCA CCGC TTTGGTTTCTAAGCC TERM 3180 3053712 - 3053728 + g 73 -10.9 -2.71001 | opp_overlap 3053727, overlap 3053711 3053706 CTAATTTCGCCGATA TGCTTGG TAA CCAAGCA ATTAGTTTCCAACTG TERM 3181 3055408 - 3055420 + G 76 -4.7 -4.73677 | CCGAAAGGTCACTTA GGCGC ACA GCGAC TTTGTTTATTATCAG MADE_02807 3054010 - 3056196 + | hypothetical protein TERM 3182 3057138 - 3057158 + G 70 -4.7 -4.42806 | overlap 3057137 TTCGGATTATCTTCC CCTCAGTCA GGG TGATTCAGG TTTCTTTCAACCTGA TERM 3183 3057229 - 3057200 - g 100 -18.1 -3.53012 | opp_overlap 3057207, overlap 3057207 GCTTCGCTGGGCAAA CAAAAAAGCCTCC CGAA GGAGGCTTTTTTG GCTAAAACCGAATAT TERM 3184 3057207 - 3057222 + G 100 -10.4 -5.08824 | opp_overlap 3057207 3057200 TGGGCAAACAAAAAA GCCTCC CGAA GGAGGC TTTTTTGGCTAAAAC TERM 3185 3057222 - 3057207 - g 100 -10.4 -5.63517 | opp_overlap 3057207, overlap 3057200 TGGGCAAACAAAAAA GCCTCC CGAA GGAGGC TTTTTTGGCTAAAAC MADE_02808 3056746 - 3057234 + | hypothetical protein MADE_02809 3058515 - 3057244 - | TPR domain protein MADE_02810 3058907 - 3058512 - | TonB2 protein MADE_02811 3059523 - 3059125 - | Biopolymer transport protein TERM 3186 3059243 - 3059261 + g 72 -6.7 -4.21811 | ATTACGTAGTCAGTA GGCTGCT CGGTA AGCAGTC TTTCTATATTCGCTC MADE_02812 3060059 - 3059535 - | TonB system biopolymer transport component MADE_02813 3061092 - 3060061 - | TonB system biopolymer transport component TERM 3187 3061247 - 3061272 + r 86 -4.7 -5.36441 | gap 1, opp_overlap 3061230 GCTTGCTTATCAGCA CGTGCAGACTGG AAC TCAG-CTTCACG TTTTTTATCTAGACG MADE_02814 3061719 - 3061363 - | TonB system biopolymer transport component MADE_02815 3062330 - 3062857 + | Prolyl 4-hydroxylase, alpha subunit MADE_02816 3064668 - 3062854 - | TPR domain protein TERM 3188 3063850 - 3063865 + g 100 -7.6 -5.60993 | AAGAATTAAATCAGG CTTGTC TAAT GACAAG TTTTTTTCTAACAAA MADE_02817 3065660 - 3064668 - | Aspartyl/Asparaginyl beta-hydroxylase TERM 3189 3065589 - 3065575 - G 70 -5 -4.53036 | CTATAAAGACGAAAA GCATCA TTA TAATGC CCCGCGTTTATAGCG TERM 3190 3065688 - 3065668 - R 90 -9 -4.99035 | opp_overlap 3065668 TTAGTCATACAAAAA TGGGAAGC GTTTT GCCTCCCA TCTTAAACTAACATT MADE_02818 3065984 - 3065712 - | hypothetical protein MADE_02819 3067120 - 3065990 - | Prolyl 4-hydroxylase alpha subunit TERM 3191 3067159 - 3067146 - R 100 -8.1 -5.60689 | opp_overlap 3067146 CCACATAACAAAAAA GCCTC CGAA GAGGC TTTTTAAATTCTATC TERM 3192 3067146 - 3067159 + r 84 -8.1 -4.79756 | opp_overlap 3067146 CCACATAACAAAAAA GCCTC CGAA GAGGC TTTTTAAATTCTATC MADE_02820 3069993 - 3067186 - | TonB-dependent receptor TERM 3193 3070289 - 3070256 - R 77 -6.1 -4.56775 | gap 1 ACGCTTTGGTAAAAA GGGCG-GAATATAC ACCTAAA GTATACCCACGCCC TAACCTTAAATCTCT MADE_02821 3071776 - 3070319 - | OmpA-related protein MADE_02822 3073091 - 3072003 - | tryptophan 2,3-dioxygenase MADE_02823 3073414 - 3073695 + | putative orphan protein MADE_02824 3074952 - 3073894 - | leucine dehydrogenase TERM 3194 3075190 - 3075211 + H 100 -10.3 -5.92337 | opp_overlap 3075188 AATTGAATACAATTT TTCTAGGAT AGCT ATCCTAGAA TTTTTTTTGATATAT MADE_02825 3075387 - 3075728 + | transcriptional regulator, AsnC family protein MADE_02826 3076423 - 3075770 - | maleylacetoacetate isomerase MADE_02827 3077465 - 3076557 - | 2-keto-4-pentenoate hydratase MADE_02828 3077549 - 3077674 + | hypothetical protein TERM 3195 3078001 - 3077979 - T 72 -8.4 -3.53012 | overlap 3077995 3077996 3077999 GCTTGCGCCCGTAAA CCCCGCGTTA TTA TAACGCAGCG CAATAAACGCTCGCT MADE_02829 3079589 - 3078033 - | Transcriptional regulatory protein tyrR TERM 3196 3079131 - 3079111 - G 81 -12.7 -3.136 | overlap 3079107 3079109 GTAATAGGCAACATA TCAGCAAGA TAA TCTTGCTGA ATAAACTTAACCTTT TERM 3197 3079759 - 3079740 - R 100 -5.7 -6.06723 | opp_overlap 3079740 GGGCCTAAAAAAAAA TGCCACT ACAACG AGCGGCA TCCTATATAAAACAC MADE_02830 3080608 - 3079793 - | Phenylalanine-4-hydroxylase TERM 3198 3080762 - 3080744 - R 95 -8.8 -5.46706 | opp_overlap 3080744 ATTTTAAAAGAAAAA GCCGCTAT TAA AAAGCGGC TTTCATTGCTTATCG TERM 3199 3080744 - 3080762 + r 79 -8.8 -4.02535 | opp_overlap 3080744 ATTTTAAAAGAAAAA GCCGCTAT TAA AAAGCGGC TTTCATTGCTTATCG MADE_02831 3081242 - 3080796 - | phage shock protein C MADE_02832 3081478 - 3081239 - | phage shock protein B TERM 3200 3081533 - 3081546 + r 73 -2.3 -5.34365 | TGCGTTTGGCATACA AAGGG TACA CCCTA TTTTTCTTATTCTGA TERM 3201 3081568 - 3081585 + r 74 -4.8 -4.74084 | overlap 3081558 TTATTCTGATTTTTC GGTGCT TTTATT GGCACC TTTTACTTTTGCTTT MADE_02833 3082236 - 3081553 - | phage shock protein A TERM 3202 3081931 - 3081949 + g 86 -5.2 -5.50723 | overlap 3081932 CTCTTTACTTAACGT CTCTGCGG CTT CTGCAGAC TTTTTCTTTTCCTGC TERM 3203 3081932 - 3081948 + g 74 -8.7 -3.88807 | overlap 3081931 TCTTTACTTAACGTC TCTGCGG CTT CTGCAGA CTTTTTCTTTTCCTG TERM 3204 3083130 - 3083100 - g 84 -8.3 -4.65895 | GGCTTCACTGAAAAA GCCAAGCGTACTC TGCTT GATTACGATTGGC CCGGAAATATTCGAG MADE_02834 3082458 - 3083579 + | sigma-54 depedent transcriptional activator PspF TERM 3205 3083829 - 3083841 + G 70 -9.1 -3.37796 | ATTGTGCCAAGCTTA GCCAG TAG CTGGC TTGTAAGTAATGACG MADE_02835 3083583 - 3085319 + | putative ABC transporter, periplasmic peptide-binding protein MADE_02836 3085352 - 3086347 + | peptide transport protein (ABC superfamily, membrane) TERM 3206 3087128 - 3087152 + G 85 -5.7 -5.36965 | opp_overlap 3087132, overlap 3087130 CCTTGCACCTTGGAA TGTAGCCGTAC CGG GTATGGCAATA TTTTTTATGGTGTTA TERM 3207 3087130 - 3087150 + G 72 -6.1 -4.30057 | opp_overlap 3087132, overlap 3087128 TTGCACCTTGGAATG TAGCCGTAC CGG GTATGGCAA TATTTTTTATGGTGT MADE_02837 3086436 - 3087227 + | peptide transport protein (ABC superfamily, membrane) MADE_02838 3087229 - 3088224 + | putative peptide ABC transporter, ATP-binding protein TERM 3208 3088625 - 3088683 + G 74 -8.3 -3.99324 | opp_overlap 3088630, overlap 3088628 CAAGCCTATTATTGA GGATATGCTGGTAAAAGTAGGGCTGCT GCGCG AGCATTATTACTTTTACCGGCACATGC TTTCTGATGGTCAAC MADE_02839 3088224 - 3089027 + | peptide ABC transporter, ATP-binding protein TERM 3209 3089022 - 3089048 + T 100 -14.6 -3.1855 | opp_overlap 3089021 3089020 3089015, overlap 3089030 CCGCAAAACACAATT CGTTAAAGCCCA CCG TGGGTTTTAACG TTGGGTATTAAAAAG TERM 3210 3089030 - 3089040 + T 73 -6.8 -4.19953 | opp_overlap 3089021 3089020 3089015, overlap 3089022 CACAATTCGTTAAAG CCCA CCG TGGG TTTTAACGTTGGGTA TERM 3211 3089081 - 3089063 - T 100 -13.2 -4.72272 | opp_overlap 3089058 3089063 GTTGGGTATTAAAAA GGGGCAAA CCC TTTGCCCC TTACCTTATTAACTT TERM 3212 3089063 - 3089081 + T 93 -13.2 -3.29861 | opp_overlap 3089063, overlap 3089058 GTTGGGTATTAAAAA GGGGCAAA CCC TTTGCCCC TTACCTTATTAACTT MADE_02840 3090275 - 3089145 - | oxaloacetate decarboxylase, beta subunit TERM 3213 3089957 - 3089940 - G 76 -8.4 -4.0828 | opp_overlap 3089944 AGCGAAAATACCAAA CTGGGC TGCGGC GCCCAG TAGCAGCATTTTCGG MADE_02841 3092093 - 3090279 - | oxaloacetate decarboxylase MADE_02842 3092318 - 3092112 - | putative oxaloacetate decarboxylase subunit gamma MADE_02843 3092329 - 3092472 + | oxaloacetate decarboxylase TERM 3214 3092618 - 3092641 + T 79 -11 -3.1247 | opp_overlap 3092620, overlap 3092620 GAAGCAGAAATGAAA AAGCCCACCT AAAA AGGTGGGCTC TTCAATGTGGCGCGT TERM 3215 3092639 - 3092620 - T 100 -13.6 -5.05505 | opp_overlap 3092618 3092620 AGCAGAAATGAAAAA GCCCACCT AAAA AGGTGGGC TCTTCAATGTGGCGC TERM 3216 3092620 - 3092639 + T 93 -13.6 -3.12327 | opp_overlap 3092620, overlap 3092618 AGCAGAAATGAAAAA GCCCACCT AAAA AGGTGGGC TCTTCAATGTGGCGC MADE_02844 3093123 - 3092995 - | hypothetical protein TERM 3217 3093332 - 3093349 + r 76 -6.9 -4.34402 | opp_overlap 3093332 AACACAAACAAAAAA GGCCAGC ATAA GCTGACC TTTTCCTGTGAAGCG TERM 3218 3093349 - 3093332 - R 100 -9.1 -5.7827 | opp_overlap 3093332 AACACAAACAAAAAA GGCCAGC ATAA GCTGACC TTTTCCTGTGAAGCG MADE_02845 3093566 - 3093375 - | carbon storage regulator MADE_02846 3096298 - 3093701 - | alanyl-tRNA synthetase MADE_02847 3097055 - 3096594 - | Regulatory protein RecX TERM 3219 3098079 - 3098058 - g 77 -10.3 -3.41587 | opp_overlap 3098055 3098058 TTGTAGAAAATTTAA GTGACAATA TGCT TATTGTCAC TGCTTTTGAAAATGA TERM 3220 3098058 - 3098079 + G 73 -10.3 -3.09004 | opp_overlap 3098058, overlap 3098055 TTGTAGAAAATTTAA GTGACAATA TGCT TATTGTCAC TGCTTTTGAAAATGA MADE_02848 3097175 - 3098512 + | hypothetical protein TERM 3221 3098637 - 3098647 + G 71 -6.8 -4.14511 | opp_overlap 3098630, overlap 3098630 GCAAACGACGAAGCT GAGC TTG GCTC TTTTGGCGTAGACTT TERM 3222 3098823 - 3098813 - g 74 -5.4 -4.63928 | opp_overlap 3098813 AGAGCAGGTGAAAAA CATC ATT GATG GTTTAATGGAGAAGT MADE_02849 3098502 - 3100589 + | putative peptidase M13 family protein TERM 3223 3100603 - 3100627 + F 81 -12.1 -2.52464 | opp_overlap 3100595 3100602 AATTAAACAGGTAAC CTGGCCCCCCT TCA AGGCGGGTCAG TACGTTGCAAAAAGC TERM 3224 3100666 - 3100641 - f 91 -10.5 -4.58663 | gap 1, opp_overlap 3100642 3100643, overlap 3100642 3100643 AGTACGTTGCAAAAA GCGCGGTAGGCT ATG AACCTACCGC-C TTTTTTAACCTGCCG TERM 3225 3100666 - 3100642 - f 80 -10.7 -3.34716 | opp_overlap 3100642 3100643, overlap 3100641 3100643 GTACGTTGCAAAAAG CGCGGTAGGCT ATG AACCTACCGCC TTTTTTAACCTGCCG TERM 3226 3100642 - 3100666 + F 90 -8.5 -5.0538 | opp_overlap 3100641 3100642 3100643, overlap 3100643 GTACGTTGCAAAAAG CGCGGTAGGCT ATG AACCTACCGCC TTTTTTAACCTGCCG TERM 3227 3100665 - 3100643 - f 93 -14.2 -2.60508 | opp_overlap 3100642 3100643, overlap 3100641 3100642 TACGTTGCAAAAAGC GCGGTAGGCT ATG AACCTACCGC CTTTTTTAACCTGCC TERM 3228 3100643 - 3100665 + F 89 -12 -3.62746 | opp_overlap 3100643 3100641 3100642, overlap 3100642 TACGTTGCAAAAAGC GCGGTAGGCT ATG AACCTACCGC CTTTTTTAACCTGCC MADE_02850 3100653 - 3100772 + | hypothetical protein MADE_02851 3101313 - 3100753 - | putative transcriptional repressor for the cellular response to osmotic stress (TetR/AcrR family) protein TERM 3229 3100873 - 3100894 + g 71 -3.5 -4.82333 | opp_overlap 3100873 3100874 3100877, overlap 3100877 ATAGCCGTCAATCAA CGCAGCTGT CGAT GCCGCAGCG TTTTTCACTTGTTCT TERM 3230 3101360 - 3101390 + r 76 -11 -2.63631 | opp_overlap 3101362 TTAAATCAAATAATA AACCTGGGGCAGCG GTG CGCTGCCCAAGGCA TGATATCACGATTAG TERM 3231 3101388 - 3101362 - R 100 -18 -4.64024 | opp_overlap 3101360 AAATCAAATAATAAA CCTGGGGCAGCG GTG CGCTGCCCAAGG CATGATATCACGATT MADE_02852 3103828 - 3101402 - | TonB-dependent receptor TERM 3232 3104008 - 3103991 - R 100 -8.4 -5.82281 | AAAGACATAAAAAAA GCCCTC GCGAAG GAGGGC TAAAGAAGGGAAAGG MADE_02853 3105683 - 3104046 - | low affinity sulfate transporter TERM 3233 3105652 - 3105616 - G 75 -10.1 -3.57263 | overlap 3105623 3105625 AGCGCCAGTGGCAAA GCAACGATACCGGCGGT TAA ACCACCGGTAAAATCGC CACGTAAATTAGAAA TERM 3234 3105645 - 3105623 - G 84 -14.2 -2.89569 | overlap 3105616 3105625 GTGGCAAAGCAACGA TACCGGCGGT TAA ACCACCGGTA AAATCGCCACGTAAA TERM 3235 3105643 - 3105625 - G 80 -12.4 -2.99596 | overlap 3105623 3105616 GGCAAAGCAACGATA CCGGCGGT TAA ACCACCGG TAAAATCGCCACGTA TERM 3236 3105706 - 3105718 + r 72 -9.1 -3.33162 | AGCCTTATTCGGAGC GCGCA AGT TGCGC TTCTGCAGTAGACTC MADE_02854 3106348 - 3105695 - | carbonic anhydrase TERM 3237 3106873 - 3106889 + G 91 -7.9 -5.1244 | opp_overlap 3106873 3106872 CCCGATTTACACAAG CGCAAGC CTG GCCTGCG TTTTTATGTTCGTGA MADE_02855 3106507 - 3107475 + | transcriptional regulator, LysR family protein TERM 3238 3107674 - 3107717 + G 75 -9.6 -3.53012 | gap 1, opp_overlap 3107674, overlap 3107674 3107686 TAACGCTTACACAAG C-GGGGCAAAGTGTGCTGGGT TTG GCCCATCGTGTTTTGCCCCAG TTTGAACACACAGAG TERM 3239 3107821 - 3107831 + G 74 -5.4 -4.58283 | opp_overlap 3107819, overlap 3107819 AGTGGCTCTTAAAGG TGGT TGC ACCA TTTTTAAAAGCGTTC TERM 3240 3108335 - 3108318 - g 77 -7 -4.54047 | opp_overlap 3108318 TTAGGGCATAGAAAA GCCCAA GACGTG TTGGGC TTTGTTGACGATTTT TERM 3241 3108318 - 3108335 + G 74 -7 -4.19974 | opp_overlap 3108318 TTAGGGCATAGAAAA GCCCAA GACGTG TTGGGC TTTGTTGACGATTTT MADE_02856 3107493 - 3108380 + | Transcriptional regulator MADE_02857 3108726 - 3108442 - | hypothetical protein MADE_02858 3109341 - 3108751 - | hypothetical protein TERM 3242 3109100 - 3109090 - G 72 -8.2 -3.83026 | GCGTCCCACAGTAAA CGCC ACG GGCG CGCTTATGTTATCTA TERM 3243 3109275 - 3109300 + g 87 -10.4 -4.17316 | opp_overlap 3109267 3109281, overlap 3109278 3109296 TCGCAAACGTGCGTT CAAGCACGCC TAAAAT GGCGCGCTTG TTATTTTCACAGGCT TERM 3244 3109278 - 3109297 + g 72 -6.3 -4.20868 | opp_overlap 3109267 3109281, overlap 3109275 3109296 CAAACGTGCGTTCAA GCACGCC TAAAAT GGCGCGC TTGTTATTTTCACAG MADE_02859 3112004 - 3109380 - | B12-dependent methionine synthase MADE_02860 3113081 - 3112014 - | B12-dependent methionine synthase TERM 3245 3112679 - 3112691 + g 70 -4.7 -4.48743 | GGCCTAAAACGCCTG CCACG AAT CGCGG TTTGTTTGGCGTTTT MADE_02861 3114023 - 3113085 - | homoserine O-succinyltransferase TERM 3246 3114092 - 3114109 + r 82 -4.1 -5.47218 | ATGTCAACATCTTTA CGTCTAG ACGT CTAAACG TTTTTTTGAGTAACG MADE_02862 3114624 - 3114190 - | ATPase involved in DNA repair MADE_02863 3115175 - 3114684 - | chemotaxis protein CheW MADE_02864 3116008 - 3115193 - | CheW protein MADE_02865 3116780 - 3116016 - | putative ParA family protein MADE_02866 3117918 - 3116809 - | chemotaxis-specific methylesterase TERM 3247 3117709 - 3117720 + g 80 -7.2 -4.68593 | AGAGAACATGAGGAT CGGC GTAG GCCG TTTTTCCATGATAGC MADE_02867 3120223 - 3117968 - | chemotaxis protein cheA TERM 3248 3118276 - 3118295 + g 73 -4.2 -4.81551 | overlap 3118282 CTATCATTGTTAGTT GGCCATCA ACCG TGTTGGTC TTTTTGATGTCCATG TERM 3249 3119147 - 3119162 + g 80 -6 -5.00846 | overlap 3119148 GGTTTCAGCCGGTGG GGCTGC GGCA GCTGCC TTTTTATCATCTTTC MADE_02868 3120991 - 3120236 - | chemotaxis protein cheZ TERM 3250 3120813 - 3120842 + g 77 -9.4 -3.84246 | opp_overlap 3120810 3120813 3120818, overlap 3120814 TCAATTTGAAAATTA TTTAACGCGTCA TGGAGT TGACGCGTTAAC TTTCCTACTTCAGCA TERM 3251 3120814 - 3120841 + g 82 -12.9 -2.90227 | opp_overlap 3120813 3120810 3120818, overlap 3120813 CAATTTGAAAATTAT TTAACGCGTCA TGGAGT TGACGCGTTAA CTTTCCTACTTCAGC TERM 3252 3120912 - 3120944 + g 70 -9.4 -3.41704 | opp_overlap 3120900 3120911, overlap 3120900 3120911 AGAGCGTTAGCAGAC GCGTTGTCACCT-TCT TCC AGATAGGTGACAA-GC TGTTTGGCCTCTTCT MADE_02869 3121421 - 3121026 - | chemotaxis protein CheY MADE_02870 3122177 - 3121446 - | flagellar biosynthesis sigma factor FliA MADE_02871 3123040 - 3122174 - | flagellar biosynthetic protein FlhG MADE_02872 3124479 - 3123046 - | flagellar biosynthesis protein TERM 3253 3123212 - 3123190 - G 71 -10.6 -2.69449 | overlap 3123189 GGTGACATAACTAAC CGGCAGTTGA TAT TCAACTGCAG CGCTCAATACCTCTC MADE_02873 3126608 - 3124509 - | flagellar biosynthesis protein TERM 3254 3125412 - 3125401 - G 73 -4.4 -4.89477 | opp_overlap 3125405 GGGGGAATAAGAAAA CCAA GTTC TTGG GAGAGCTTTTTACGC TERM 3255 3125987 - 3125972 - G 74 -5.4 -4.56314 | gap 1, opp_overlap 3125975 3125976, overlap 3125975 TCAACATAATGAAAA GAC-CGG CGA CCGCGTC ACCCTTTACGAATTT MADE_02874 3127922 - 3126798 - | flagellar biosynthesis protein TERM 3256 3127844 - 3127856 + g 89 -6.2 -5.41143 | ATAGTTCACGGGAAC GGGC TAGCT GCCC TTTTTTTCGGGCATC MADE_02875 3128790 - 3128011 - | flagellar biosynthesis protein TERM 3257 3128166 - 3128141 - G 80 -6.1 -4.7629 | opp_overlap 3128160, overlap 3128146 TGAGCAATGGAAAAA CCAATGCTGAA AATG TTCAGCTGTGG CGCAGCTTTTGTCAT TERM 3258 3128160 - 3128172 + g 72 -5.5 -4.5442 | opp_overlap 3128146 3128141 TGCTGAAAATGTTCA GCTGT GGC GCAGC TTTTGTCATTACACC MADE_02876 3129072 - 3128803 - | flagellar biosynthesis MADE_02877 3129836 - 3129081 - | flagellar biosynthesis MADE_02878 3130191 - 3129829 - | polar flagellar assembly protein FliO TERM 3259 3130292 - 3130272 - R 84 -6.7 -4.86731 | opp_overlap 3130272 GCTGGCTAAATAAAA GGGGCAGCA AGG CGCAACCCC TTAGTATATAAGAAG MADE_02879 3130717 - 3130310 - | flagellar motor switch protein MADE_02880 3131793 - 3130735 - | flagellar motor switch protein MADE_02881 3132360 - 3131821 - | flagellar basal body-associated protein TERM 3260 3132168 - 3132200 + gH 79 -10.5 -3.5393 | TTCCTGGGCCAGCGG CTGGTGCGGTAGCGG CTG CGGCTGCAGCATCAG TTTCAGCAAGCTGCT TERM 3261 3132425 - 3132415 - gR 80 -6.8 -4.56775 | opp_overlap 3132409 3132415 AGGTTCCTTCAAAAA TGGC AAT GCCA TTGTTTGTATATGCT TERM 3262 3132415 - 3132425 + Gr 73 -6.8 -4.19276 | opp_overlap 3132415, overlap 3132409 AGGTTCCTTCAAAAA TGGC AAT GCCA TTGTTTGTATATGCT MADE_02882 3132359 - 3132496 + | hypothetical protein MADE_02883 3134888 - 3132582 - | polar flagellar hook-length control protein FliK TERM 3263 3132890 - 3132858 - G 77 -9.3 -3.9712 | gap 1 TGACTGCACCACAAA GCTAACGCTTGCGG CGTCTC CCGCAA-CGTTAAC GCGAACCTGCATACT MADE_02884 3135239 - 3135126 - | hypothetical protein MADE_02885 3135682 - 3135236 - | Flagellar biosynthesis chaperone TERM 3264 3135278 - 3135267 - G 79 -2.2 -5.52384 | TTGGCACGAAAAAAA CGCT GGGT AGCA AATTCATCCATCATT TERM 3265 3135322 - 3135332 + g 95 -3.2 -5.93809 | TTGCTTCTTTTTTCT GCTG AGC TAGC TTTTTTTTATCAAGC MADE_02886 3137089 - 3135755 - | flagellum-specific ATP synthase TERM 3266 3137075 - 3137103 + g 75 -9.5 -3.55203 | opp_overlap 3137066 3137067 3137070 TTCAAAGTGACTATG CCACGGGCTAGTC ATC GGATAGCCCTTGG TTTAGCAAAAATTTT MADE_02887 3137864 - 3137082 - | flagellar assembly protein MADE_02888 3138959 - 3137919 - | flagellar motor protein MADE_02889 3140666 - 3138972 - | flagellar M-ring protein TERM 3267 3139643 - 3139653 + g 81 -8.2 -4.42619 | TAGTTTGTTGACTAC CGCC CAC GGCG TTTTCTGGGATATTA TERM 3268 3140128 - 3140139 + g 78 -5.8 -4.87803 | GCTTTTTTCTCTCTG CGTG CAAA CACG TTTTCTTTGGGCGTG TERM 3269 3140515 - 3140504 - G 73 -2.2 -5.25772 | AAATCAGAATAAAAA TAGC GATA GCCA CACAAATAACGAGGA MADE_02890 3141047 - 3140679 - | Flagellar hook-basal body protein TERM 3270 3141018 - 3141028 + g 72 -5.4 -4.39696 | opp_overlap 3141018 TTTAACGTCCATAAC CACT CCT AGTG TTTCTTCATTTACCG TERM 3271 3141220 - 3141191 - R 100 -11.5 -5.52023 | opp_overlap 3141190 AGGAGCAACAAAAAA CCGCCGCCTTT TTAGTAGC AAAGGCGACGG GTAGGTTTGAGGGGA MADE_02891 3142597 - 3141260 - | flagellar regulatory protein C MADE_02892 3143756 - 3142614 - | putative sensory box sensor histidine kinase in two-component regulatory system TERM 3272 3142760 - 3142776 + gH 79 -3 -5.31275 | gap 1, opp_overlap 3142760 TAACCACCGCCAAAC CAA-GGC CGGT GCCGTTG TTTTTTGTGGTGAAA TERM 3273 3143266 - 3143287 + gH 72 -5.2 -4.56597 | gap 1 AGAGGCGTACGAATT TGGTGAGCA AGGGA TGC-CACCA TTTTTCCCAAAGAGG TERM 3274 3143438 - 3143408 - GH 73 -7.6 -4.03413 | ATGGCGTGATAGAAA GCTTCACTCGGCGA CCG TCAACAAGTGAAAC TTCGTGGCCATCGTC TERM 3275 3143816 - 3143832 + Gr 71 -6.6 -4.11304 | TAAAGCAGAAGATGT GCCAAT TCATC ATTGGC TTATTTATCAATTAG MADE_02893 3143733 - 3143876 + | hypothetical protein TERM 3276 3143871 - 3143898 + Tr 73 -8.5 -3.68073 | opp_overlap 3143871 GAATTTAAAAGAAAA GCGTAACGTCA ATTACC TGACATTACGC TTCTTCAGTGCGCTG TERM 3277 3143898 - 3143871 - TR 95 -11.4 -5.13343 | opp_overlap 3143871 GAATTTAAAAGAAAA GCGTAACGTCAA TTAC CTGACATTACGC TTCTTCAGTGCGCTG MADE_02894 3145356 - 3143893 - | polar flagellar protein FlaK TERM 3278 3144706 - 3144743 + g 79 -11.3 -3.43042 | gap 1, overlap 3144727 TTCGGCTAGCTCGAA GCGCCCTTTACGCGCGCT GAT GGCGCCAGTAAAGG-CGC CTTTTTCATGACCAA TERM 3279 3144727 - 3144744 + g 93 -9.8 -4.72272 | overlap 3144706 TTTACGCGCGCTGAT GGCGCC AGTAAA GGCGCC TTTTTCATGACCAAA TERM 3280 3145488 - 3145459 - R 70 -8.7 -3.42257 | opp_overlap 3145459 3145464 3145467, overlap 3145467 GCGGAAATATAGCAA TAAAAAAAGCAGG TTAC CCTGCTTCTTTTG GTTAATTTGTAGAAA TERM 3281 3145464 - 3145483 + r 77 -6.4 -4.53774 | opp_overlap 3145459 3145467, overlap 3145459 3145467 AATATAGCAATAAAA AAAGCAGG TTAC CCTGCTTC TTTTGGTTAATTTGT TERM 3282 3145467 - 3145480 + r 80 -8.1 -4.34912 | opp_overlap 3145467 3145459, overlap 3145464 3145459 ATAGCAATAAAAAAA GCAGG TTAC CCTGC TTCTTTTGGTTAATT TERM 3283 3145480 - 3145467 - R 100 -8.1 -5.85737 | opp_overlap 3145464 3145459 3145467, overlap 3145459 ATAGCAATAAAAAAA GCAGG TTAC CCTGC TTCTTTTGGTTAATT MADE_02895 3146358 - 3145561 - | hag; flagellin TERM 3284 3146915 - 3146905 - g 72 -5.4 -4.38154 | overlap 3146914 AGATGGTGCAGAAAA CGTT ATT AACG CCGCAATCGACAATA MADE_02896 3146585 - 3147583 + | polysaccharide biosynthesis protein TERM 3285 3147796 - 3147819 + G 80 -9.6 -3.92602 | GTGGGAGAAGGGGAT CGAGTTTGGA CATC TCCCAACTCG TTTGTAGCCTCTTCA TERM 3286 3148654 - 3148672 + G 71 -3.8 -4.84363 | opp_overlap 3148654 3148656, overlap 3148656 GAGCTATATTATCAA CAGGCAAT TAC GTTGCCTA TTTTTCCTAGTTTAA MADE_02897 3147583 - 3148752 + | putative DegT/DnrJ/EryC1/StrS aminotransferase MADE_02898 3148821 - 3149525 + | putative Acylneuraminate cytidylyltransferase TERM 3287 3149540 - 3149528 - T 70 -3.4 -4.88918 | overlap 3149523 CCATTTTAAATAAAA GGTT TAGTC AACC TGAAGATTATTTAAA MADE_02899 3150837 - 3150319 - | Methionyl-tRNA formyltransferase-like protein TERM 3288 3151187 - 3151162 - R 83 -11.1 -3.63744 | overlap 3151160 GCTGCCTTTAAAATA GTGGCTGGCGG CACA CCGCCAATCAC CGAGTTAGGCCTTTC MADE_02900 3151268 - 3151143 - | ISMca4, transposase, OrfAB TERM 3289 3151593 - 3151611 + r 79 -5.3 -5.13741 | ACACTCAGTGTGTCA GGCTTAT CTCGT ATGAGCC TTTTTCTTGGCTTGA MADE_02901 3151895 - 3151737 - | ISxcd1 transposase TERM 3290 3152323 - 3152335 + r 74 -6.3 -4.32233 | opp_overlap 3152323 CCATTAATGACACAA CTCTA AGT TAGAG TTTTCCAGTTTTTCT MADE_02902 3153153 - 3152350 - | Integrase, catalytic region MADE_02903 3153419 - 3153156 - | transposase ORF-A, IS-type MADE_02904 3153653 - 3153468 - | putative orphan protein; putative transposase (IS66 family element,Orf2-like) MADE_02905 3155590 - 3153956 - | Transposase, IS4 family protein MADE_02906 3157102 - 3156059 - | probable transposase TERM 3291 3156518 - 3156496 - G 72 -9.1 -3.61398 | opp_overlap 3156496 3156488 CTTCTTTCTCAATAA GCGTGTCGA GCGTA TCGACTCGC TCTTGGAGTTGCCTT MADE_02907 3158364 - 3157321 - | NeuB:Antifreeze-like protein MADE_02908 3158927 - 3158802 - | hypothetical protein MADE_02909 3159688 - 3159020 - | probable methionyl-tRNA formyltransferase MADE_02910 3160362 - 3159685 - | putative LmbE-like protein TERM 3292 3160382 - 3160402 + r 77 -8.3 -3.80516 | overlap 3160370 TTACTCGGCTTTTTT CGAGCTTTA TTG TAACGCTCG TTTAGTAAGTTACTT MADE_02911 3162752 - 3160650 - | Maf-1 TERM 3293 3161100 - 3161116 + g 95 -10.9 -4.62302 | overlap 3161113 3161114 AAACACTTTCGGGGT GCGAAGA ACG TCTTCGC TTTTTAGCGGTATTG TERM 3294 3162468 - 3162442 - G 83 -4.5 -5.41143 | GAGCGCCCAAAAAAA GCAGATTGA GTATAATGT TCAACCTGC GCTTCGCACTGTGCA TERM 3295 3162711 - 3162723 + g 82 -7.7 -4.62872 | CAACGCCGATTCTAT CTTGG CCT CCAAG TTTTTCAGCGTTAAT MADE_02912 3163060 - 3162764 - | hypothetical protein MADE_02913 3163481 - 3163062 - | Flagellin-specific chaperone FliS MADE_02914 3164933 - 3163518 - | Flagellar capping protein MADE_02915 3165477 - 3164962 - | FlaG TERM 3296 3165533 - 3165507 - R 100 -13.8 -4.54047 | opp_overlap 3165507 3165532 GTATTTTAGAGAAAA CATAAACGCCCT CAA AGGGCGCTCATG TTTTTTAAGCATTAA TERM 3297 3165507 - 3165533 + r 93 -9.4 -5.055 | opp_overlap 3165507, overlap 3165532 GTATTTTAGAGAAAA CATAAACGCCCT CAA AGGGCGCTCATG TTTTTTAAGCATTAA MADE_02916 3166510 - 3165551 - | flagellin TERM 3298 3166207 - 3166230 + g 83 -10.2 -3.80018 | CATCAGTATTTGAGC CGTTCGCAGC TTGT GCCGCGAGCG TTCTTACTCTCTGAA TERM 3299 3166297 - 3166310 + g 72 -6.7 -4.23794 | opp_overlap 3166297, overlap 3166293 TTTGCGCCACAGATA TGCCA TCGT TGGCA TTTCTATTACCTTGG TERM 3300 3166750 - 3166735 - R 70 -9 -3.19563 | overlap 3166726 3166733 TACAGACCATGAACA CGGCAA ACCA TTGCCG GAAAGCGTCTAAAAA TERM 3301 3166953 - 3166988 + r 79 -5.5 -4.91977 | gap 1 TGCTGTCCATTCTAA GCGCCCTTG-TTACTA CCCCT TACAAATCAAGGGCGC TTTTCTCTTTTACTG MADE_02917 3167957 - 3166998 - | flagellin MADE_02918 3169701 - 3168487 - | putative flagellar synthesis; flagellar regulon; hook-associated protein MADE_02919 3171751 - 3169709 - | Flagellar hook-associated protein TERM 3302 3170287 - 3170304 + g 73 -9.9 -3.42702 | opp_overlap 3170286 3170287, overlap 3170285 CTGCGCCGTCAAAAG CTGAGGT TCCC ACCTCAG TGTTATTCACTGATA TERM 3303 3170304 - 3170287 - G 70 -9.9 -3.04398 | opp_overlap 3170287 3170285, overlap 3170286 CTGCGCCGTCAAAAG CTGAGGT TCCC ACCTCAG TGTTATTCACTGATA MADE_02920 3172718 - 3171768 - | putative flagellar biosynthesis MADE_02921 3173891 - 3172779 - | flagellar P-ring protein precursor MADE_02922 3174592 - 3173912 - | flagellar L-ring protein FlgH MADE_02923 3175392 - 3174604 - | flagellar biosynthesis; cell-distal portion of basal-body rod MADE_02924 3176182 - 3175439 - | flagellar basal-body rod protein FlgF TERM 3304 3176330 - 3176301 - R 100 -14.5 -5.08178 | opp_overlap 3176307, overlap 3176307 ATATATATAGAAAAA TAAAAAGGTCGCA TTGT TGCGACCTTTCTA AATCGGGTCAAATAG TERM 3305 3176324 - 3176307 - R 100 -11.3 -5.71295 | opp_overlap 3176307, overlap 3176301 ATAGAAAAATAAAAA GGTCGCA TTGT TGCGACC TTTCTAAATCGGGTC TERM 3306 3176307 - 3176324 + r 90 -11.3 -3.92373 | opp_overlap 3176301 3176307 ATAGAAAAATAAAAA GGTCGCA TTGT TGCGACC TTTCTAAATCGGGTC TERM 3307 3176371 - 3176396 + r 70 -9.1 -3.15249 | gap 1, opp_overlap 3176369, overlap 3176369 CCGCGCCTAAAATTT GCCGC-TTAGCA ATC TGCTAATGTGGC TTACTGCAAACTATC MADE_02925 3177792 - 3176407 - | flagellar hook protein TERM 3308 3177602 - 3177592 - G 72 -5.4 -4.38712 | opp_overlap 3177587 3177592 GCTACCTTGAGAAAA TTGC TGT GCAA CTTCCTGAGTTAGTA MADE_02926 3178493 - 3177807 - | basal-body rod modification protein FlgD MADE_02927 3178908 - 3178525 - | flagellar basal-body rod protein FlgC TERM 3309 3178963 - 3178973 + r 73 -2.4 -5.19261 | GACTACTGACCTCCT GAGC TAA GCGC TTTTTTCATGCCTTT MADE_02928 3179384 - 3178950 - | flagellar basal-body rod protein FlgB MADE_02929 3180411 - 3179581 - | chemotaxis protein methyltransferase CheR MADE_02930 3181173 - 3180427 - | chemotaxis protein MADE_02931 3181222 - 3181338 + | flagellar basal body P-ring biosynthesis protein FlgA TERM 3310 3181445 - 3181471 + F 77 -5.3 -4.91109 | opp_overlap 3181445 3181451, overlap 3181451 GCAGGTCAAACGACA GAAAAATGACA CTTAA TGTCATTTTTG TTTTTGTAATAGCCA TERM 3311 3181451 - 3181465 + G 89 -4.3 -5.69262 | opp_overlap 3181445 3181451, overlap 3181445 CAAACGACAGAAAAA TGACA CTTAA TGTCA TTTTTGTTTTTGTAA TERM 3312 3181465 - 3181451 - g 78 -5 -5.06585 | opp_overlap 3181451 3181445, overlap 3181445 CAAACGACAGAAAAA TGACAC TTA ATGTCA TTTTTGTTTTTGTAA MADE_02932 3181450 - 3181587 + | hypothetical protein TERM 3313 3182065 - 3182076 + G 71 -7.2 -4.17089 | TGACGTTAGACGATT GCGG CATA CCGC TTTTACCGATTTAGA MADE_02933 3181694 - 3182344 + | putative flagellar basal-body P-ring formation protein FlgA MADE_02934 3182447 - 3182776 + | negative regulator of flagellin synthesis FlgM MADE_02935 3182807 - 3183238 + | putative flagellar protein FlgN MADE_02936 3183770 - 3183285 - | hypothetical protein MADE_02937 3183822 - 3183938 + | hypothetical protein MADE_02938 3184069 - 3185253 + | putative lipoprotein TERM 3314 3185507 - 3185489 - f 72 -10.4 -2.67694 | overlap 3185486 AGGATCACTATATTA TCGAGTTT CCA AAACTCGA ACAGGAAGTTAAAGA MADE_02939 3185625 - 3185909 + | GGDEF:EAL:Histidine kinase, HAMP region MADE_02940 3186480 - 3185884 - | putative LuxR-family transcriptional regulator MADE_02941 3187848 - 3186481 - | HlyD family secretion protein TERM 3315 3187439 - 3187458 + g 79 -10.8 -3.6142 | GACAGTCTTTGCACT TTTGCTGC GAGC GCAGCAAA TTGTGTGGTGTTCTC MADE_02942 3187958 - 3187845 - | putative toxin secretion ATP-binding protein TERM 3316 3188200 - 3188210 + G 72 -8.2 -3.68738 | overlap 3188205 CATTGAGGGATACCG CGGC GTT GCCG TTATCTCTTCAGATG MADE_02943 3187970 - 3188671 + | umuC protein MADE_02944 3191679 - 3188707 - | Tn5044 transposase MADE_02945 3192574 - 3191771 - | sterol desaturase-related protein TERM 3317 3191823 - 3191799 - G 74 -11.5 -2.83403 | opp_overlap 3191799, overlap 3191798 3191822 TGGGTCCGACGAAAT GGCTGAATCAG CAT CTGATCCAACC GGAGGTCCTGCGGCT MADE_02946 3193887 - 3192586 - | NADP-specific glutamate dehydrogenase TERM 3318 3192642 - 3192683 + g 74 -8.5 -3.84523 | overlap 3192634 GGGTCATGGCCTCGG CGATGCGGCCGATGGCCTG TGTA TAGGCCGCAGTCCGCAGCG TTATGTTATCTTCCT TERM 3319 3193513 - 3193496 - G 72 -6.2 -4.28762 | ATAAGGTCATGAAAA GCGCGG ATATAG CCACGC GACAGACGTTCCAGT TERM 3320 3194439 - 3194463 + r 71 -6.4 -4.21908 | gap 1, opp_overlap 3194437 3194434 GCATGGAAGACAACG GGACAGGA-GG CCGT CCGTCCTGACC TTTTGGGTAATAATG TERM 3321 3194539 - 3194549 + r 73 -5.4 -4.49937 | opp_overlap 3194539, overlap 3194545 TCGTTCGAGAAAGAT TTCG CGG CGAA TTTTGCTCTTCTTGG MADE_02947 3195003 - 3194680 - | DoxD-like membrane protein MADE_02948 3196583 - 3195948 - | organomercurial lyase MADE_02949 3198108 - 3196597 - | Mercuric ion reductase MADE_02950 3198544 - 3198149 - | Hg(II)-responsive transcriptional regulator MADE_02951 3199690 - 3198680 - | Phage integrase TERM 3322 3200248 - 3200219 - g 72 -4.9 -4.62069 | overlap 3200221 3200224 GTCCGATGCCAAAAA CACCATCGTGCAG CTAA CTGCCCGACAGCA AGACCTTGATAGCCA TERM 3323 3200246 - 3200221 - g 71 -7.5 -3.92746 | overlap 3200219 3200224 CCGATGCCAAAAACA CCATCGTGCAG CTAA CTGCCCGACAG CAAGACCTTGATAGC MADE_02952 3199896 - 3200945 + | chromosome segregation ATPases-like protein MADE_02953 3201315 - 3203810 + | Transposase Tn3 MADE_02954 3203823 - 3204293 + | transposase MADE_02955 3204903 - 3204517 - | Hg(II)-responsive transcriptional regulator TERM 3324 3204888 - 3204902 + g 72 -5 -4.63928 | CTTTGGCAACTTTGC TGATAC TTC GTGTCA TTTTTCACCTCCTCT MADE_02956 3205601 - 3205200 - | Phosphoribosyl-AMP cyclohydrolase TERM 3325 3205684 - 3205694 + r 81 -5.4 -5.06414 | CTCAAAGTACATTGC TTGC TGT GCAA TTTTTATTAGGCAAG MADE_02957 3206048 - 3205701 - | MerT mercuric transport protein TERM 3326 3206233 - 3206201 - R 77 -6.3 -4.59944 | opp_overlap 3206201 ATTATTACAAATAAA GACTTCAAGTGCCTT TGT AATGCGTTTGAAGTC TTCTGCTTTGGACGG TERM 3327 3206201 - 3206233 + r 82 -10.7 -3.60151 | opp_overlap 3206201 ATTATTACAAATAAA GACTTCAAGTGCCTT TGT AATGCGTTTGAAGTC TTCTGCTTTGGACGG MADE_02958 3206598 - 3206413 - | putative mercuric transport protein periplasmic binding protein MADE_02959 3207106 - 3206753 - | MerT mercuric transport protein TERM 3328 3207185 - 3207203 + r 76 -3.1 -5.30339 | opp_overlap 3207185, overlap 3207187 TTATTTGGGTTGAAA GTTCACT GCCAG AGTGACC TTTTTCTATTTTAAT MADE_02960 3207284 - 3207162 - | hypothetical protein MADE_02961 3208330 - 3207551 - | putative transposase MADE_02962 3209117 - 3209971 + | bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/5,10-methylene-tetrahydrofolate cyclohydrolase TERM 3329 3210044 - 3210025 - f 80 -6.4 -4.68209 | opp_overlap 3210025 AGCGTAACAAACAAA GGCAGAGA GTGA TGTCTGCC TTTTTGATAAGCCCA TERM 3330 3210025 - 3210044 + F 80 -6.4 -4.72272 | opp_overlap 3210025 AGCGTAACAAACAAA GGCAGAGA GTGA TGTCTGCC TTTTTGATAAGCCCA MADE_02963 3210036 - 3210680 + | hypothetical protein TERM 3331 3211105 - 3211116 + G 70 -2.2 -4.93177 | GAATAGAGCACTACA GTCA TTTA TGGC TTTTGTTCATTTTTC TERM 3332 3211412 - 3211428 + G 86 -4.4 -5.48825 | overlap 3211414 AGACGACATTAACCC TATCCC CCACC GGGATG TTTTTTTCGCTCCTA TERM 3333 3211414 - 3211426 + G 70 -4.8 -4.37763 | overlap 3211412 ACGACATTAACCCTA TCCC CCACC GGGA TGTTTTTTTCGCTCC TERM 3334 3211588 - 3211567 - g 73 -2.3 -5.22794 | gap 1, opp_overlap 3211569 3211571, overlap 3211569 3211571 ATAATGATGAAAAAA TC-TATCGCG TCA CGCTATATGA TATCGATGTGGGGTT MADE_02964 3210936 - 3211655 + | hypothetical protein TERM 3335 3212966 - 3212949 - g 76 -8.5 -4.11216 | GGCGCAGGCGGAAAA GTTAACG TCAA CGTTAAC TGGCCAGATGGTATC MADE_02965 3211827 - 3213545 + | prolyl-tRNA synthetase MADE_02966 3213585 - 3214427 + | beta-lactamase-like protein MADE_02967 3214463 - 3215482 + | Outer membrane phospholipase A TERM 3336 3215515 - 3215542 + T 93 -9.1 -5.30616 | opp_overlap 3215515 TATGAAGTAAATCAA GCGCGCTACGC TTACAT GTTTAGCGCGC TTTTTATTTAGCTAC MADE_02968 3216248 - 3215574 - | histone deacetylase family protein TERM 3337 3216557 - 3216542 - R 93 -9 -5.26875 | opp_overlap 3216542 TTGGCAATGAAAAAA GGAGCA TGGC TGCTCC TTTTTCAATAAATAG TERM 3338 3216542 - 3216557 + r 89 -9 -4.67353 | opp_overlap 3216542 TTGGCAATGAAAAAA GGAGCA TGGC TGCTCC TTTTTCAATAAATAG MADE_02969 3218185 - 3216596 - | Methyl-accepting chemotaxis protein TERM 3339 3217202 - 3217223 + g 85 -5.9 -5.43866 | ATTGGCGCTTTCGAA TGTGGCA TAACAGCT TGCCACA TTTTTTTCAGAATTA MADE_02970 3218825 - 3218529 - | Invasion associated locus B TERM 3340 3218629 - 3218610 - G 73 -2.1 -5.24531 | overlap 3218611 ATCTTCTATAAAAAA TGCAAAC ATCATA GTTTGCC CGCCCTTCATTTGTT TERM 3341 3219003 - 3219048 + r 79 -5.7 -4.90217 | gap 1, opp_overlap 3218988 3219010 3219011, overlap 3219011 TGACACTGTTAGTGT TAAAAAACCTTGGATACAACTT TTC AAGCTGTATCCAAG-TTTAATA TTTTTCGTATATTTA TERM 3342 3219042 - 3219010 - R 100 -12.9 -5.03314 | opp_overlap 3219003 3219011, overlap 3219011 GTTAGTGTTAAAAAA CCTTGGATACAACTT TTC AAGCTGTATCCAAGT TTAATATTTTTCGTA TERM 3343 3219041 - 3219011 - R 100 -16.4 -3.61506 | opp_overlap 3219003 3219011, overlap 3219010 TTAGTGTTAAAAAAC CTTGGATACAACTT TTC AAGCTGTATCCAAG TTTAATATTTTTCGT TERM 3344 3219011 - 3219041 + r 100 -14.2 -4.14652 | opp_overlap 3219011 3219010, overlap 3219003 TTAGTGTTAAAAAAC CTTGGATACAACTT TTC AAGCTGTATCCAAG TTTAATATTTTTCGT MADE_02971 3220299 - 3219079 - | Nidogen, extracellular region TERM 3345 3220547 - 3220560 + r 88 -3.8 -5.80003 | opp_overlap 3220547, overlap 3220540 CAATATTCAAAAAAA GAGC CCGAAA GCTC TTTTTTGTTTATTGC TERM 3346 3220560 - 3220547 - R 86 -4.5 -5.52909 | opp_overlap 3220547 3220540 CAATATTCAAAAAAA GAGCC CGAA AGCTC TTTTTTGTTTATTGC MADE_02972 3222164 - 3220587 - | bifunctional GMP synthase/glutamine amidotransferase protein TERM 3347 3221950 - 3221966 + g 71 -7.9 -3.88232 | overlap 3221959 TCAAATACATAATCT GGCGCTC GCG GAGAGCC TTCTTCTGTGACCGA TERM 3348 3222216 - 3222198 - R 93 -10.3 -4.78266 | AAATAAAAGAACAAA GGCTGGT GTAGT ACCAGCC TCGCAGTCGTCGGTC MADE_02973 3223575 - 3222235 - | inositol-5-monophosphate dehydrogenase TERM 3349 3223058 - 3223083 + g 72 -4.8 -4.69559 | CCAACACGAAGGCGG CCTAATTCAT CTTTAC ATGCATTAGG TTTATTTTCAGCTTT TERM 3350 3223598 - 3223610 + H 71 -6.9 -4.02132 | opp_overlap 3223587 3223598 TTAAGCGTTACATTA CGCGT AAG GCGCG TTTGTAAGTTTGCAG TERM 3351 3223992 - 3223979 - g 72 -5.9 -4.52143 | CTGAAAGACAATAAA GCGCA AGTT CGCGC CGCCATGTTTAAAGG TERM 3352 3224732 - 3224713 - g 72 -4.9 -4.60041 | opp_overlap 3224727 ACTGACCCTTAAAAA GCAGCGC TTAGAT GCTCTGC ACCCGCAAAGTCGTA MADE_02974 3223805 - 3225157 + | exonuclease VII, large subunit MADE_02975 3225173 - 3226423 + | hypothetical protein MADE_02976 3226600 - 3226478 - | exodeoxyribonuclease VII large subunit TERM 3353 3226589 - 3226604 + g 79 -3.2 -5.44721 | TTTGTATCTGTCATA CCAGTT ATAC ATCTGG TTTTTTTGAAGTGAT TERM 3354 3227090 - 3227117 + r 73 -8.5 -3.65199 | overlap 3227092 AAATAAAGGAAGGGG TTGCTACCTAG ATACAA CTAGGTAGCTA TTTAAATCGACGCTT TERM 3355 3227092 - 3227115 + r 80 -11.1 -3.40597 | overlap 3227090 ATAAAGGAAGGGGTT GCTACCTAG ATACAA CTAGGTAGC TATTTAAATCGACGC MADE_02977 3228576 - 3227131 - | GTP-binding protein EngA TERM 3356 3227369 - 3227349 - G 82 -11.1 -3.6216 | opp_overlap 3227343 CATGAATAACGATAA CAGGTGGGT TGT ACCCGCCTG CATGTGCGTATTTCA TERM 3357 3228848 - 3228822 - R 100 -16.7 -5.07652 | opp_overlap 3228822 CCCGCCAAAAGAAAA GGCGCTTCAAG TATGC CTTGAAGCGCC TTCGCTAAGCTTATT TERM 3358 3228822 - 3228848 + r 100 -16.7 -3.08738 | opp_overlap 3228822 CCCGCCAAAAGAAAA GGCGCTTCAAG TATGC CTTGAAGCGCC TTCGCTAAGCTTATT MADE_02978 3230094 - 3228886 - | PQQ enzyme repeat domain protein MADE_02979 3230810 - 3230190 - | putative membrane-associated protein with TPR-like domain TERM 3359 3230608 - 3230623 + g 72 -9 -3.55203 | ACTTTAGCATCGCTA CCTTCG CTTC CGAAGG TTTCAACCGCATTTT MADE_02980 3232106 - 3230823 - | histidine tRNA synthetase TERM 3360 3232155 - 3232138 - R 70 -5.5 -4.323 | opp_overlap 3232138 GCTAAATAGTGAAAA GCCCC GCATTATA GGGGC TTTGGGAGTAAACAA MADE_02981 3233308 - 3232190 - | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase MADE_02982 3234369 - 3233317 - | hypothetical protein MADE_02983 3236805 - 3234376 - | ATP-dependent protease La MADE_02984 3237892 - 3236852 - | ATP-dependent protease ATP-binding subunit MADE_02985 3238427 - 3237966 - | Protease subunit of ATP-dependent Clp protease MADE_02986 3238904 - 3238455 - | putative predicted transcriptional regulator TERM 3361 3238732 - 3238745 + g 72 -8.1 -3.72576 | TCGTTGAATGGTTCA CGCGA GCCA TCGCG TTTAATAACGCGGGG MADE_02987 3240264 - 3239008 - | serine hydroxymethyltransferase TERM 3362 3240410 - 3240381 - R 95 -12.2 -4.31 | overlap 3240402 CCAAATTAATATAAA TGGCGCAGGTTT AACGAA ATACCTGCGCCA GCGGGAGATCAGACC MADE_02988 3241447 - 3240419 - | UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase TERM 3363 3241481 - 3241496 + H 71 -4 -4.83615 | TATATGAATAGTGTT TGAGTG TTAA TACTCA TTTTTATGGACGCTA MADE_02989 3241751 - 3243418 + | ABC transporter related TERM 3364 3243456 - 3243444 - f 85 -4.1 -5.66338 | opp_overlap 3243444 AAAGATAATAAAAAA TAGGA TTA CCCTA TTTTGACCCACAATA TERM 3365 3243462 - 3243515 + F 100 -18.5 -4.4078 | gap 1, opp_overlap 3243476, overlap 3243463 3243476 GATTACCCTATTTTG ACCCAC-AATAAAAAGGGCTCTCATC TAC GATGAGGGCCCTTTTTATTTGTCGGC TTTTGATTGCGAACG TERM 3366 3243463 - 3243514 + F 100 -22 -3.24146 | gap 1, opp_overlap 3243476, overlap 3243462 3243476 ATTACCCTATTTTGA CCCAC-AATAAAAAGGGCTCTCATC TAC GATGAGGGCCCTTTTTATTTGTCGG CTTTTGATTGCGAAC TERM 3367 3243500 - 3243476 - f 100 -14.3 -5.20333 | opp_overlap 3243463 3243462 3243476 GACCCACAATAAAAA GGGCTCTCATC TAC GATGAGGGCCC TTTTTATTTGTCGGC TERM 3368 3243476 - 3243500 + F 100 -16.5 -5.38054 | opp_overlap 3243476, overlap 3243463 3243462 GACCCACAATAAAAA GGGCTCTCATC TAC GATGAGGGCCC TTTTTATTTGTCGGC MADE_02990 3243582 - 3243989 + | hypothetical protein MADE_02991 3245421 - 3244054 - | RadA TERM 3369 3248111 - 3248100 - g 82 -7.2 -4.75063 | ATAAAACGTTAAAAA GCGC TGTA GCGC AGAACGTTGTATCAA MADE_02992 3245612 - 3248137 + | type IV pilus assembly PilZ MADE_02993 3249217 - 3248234 - | SerB TERM 3370 3248575 - 3248564 - G 70 -2.2 -5.03715 | ATGATCGGCAAAAAA GGTA AAAC CACC GGAGGCAATAGCCAA TERM 3371 3249412 - 3249390 - H 75 -7.8 -4.09822 | opp_overlap 3249393 3249394, overlap 3249394 AAGCCACTACACAAA CAAAGAATGA CTC TCATTCATTG TATACGGCTCTGAAA TERM 3372 3249408 - 3249394 - H 81 -7.2 -4.64048 | opp_overlap 3249394 3249393, overlap 3249390 CACTACACAAACAAA GAATGA CTC TCATTC ATTGTATACGGCTCT MADE_02994 3249485 - 3250051 + | hypothetical protein MADE_02995 3250911 - 3250069 - | putative deoxyribonuclease TERM 3373 3250391 - 3250415 + g 80 -12.9 -2.53112 | opp_overlap 3250396, overlap 3250390 3250393 3250396 ACTTCCACACTGCCC GAGAAGGCGTG GAT CACCCCTTCTC CTTGATACCTTGCCT TERM 3374 3250963 - 3250949 - R 78 -7.1 -4.43681 | TATTCAAGATGAAAA CAGCG CTTAT CGCTG AACCGCAGAACGCTT MADE_02996 3251621 - 3250983 - | pyridoxine 5-phosphate oxidase MADE_02997 3252667 - 3251723 - | GTP-binding protein Era TERM 3375 3251819 - 3251834 + g 72 -6.2 -4.29981 | opp_overlap 3251818, overlap 3251809 3251812 TAGTTCTAGGAAGAC CTTGTT ATCG AACAAG TTTTCCATATCTTTA MADE_02998 3253340 - 3252654 - | ribonuclease III TERM 3376 3253242 - 3253215 - G 72 -4.8 -4.68593 | gap 1, opp_overlap 3253221 3253230, overlap 3253217 GGCATCACCTAAAAA CTCTAAGC-GCTC GTT GTGCTGCTTAGCG GCACTTCGGTGAGTA TERM 3377 3253230 - 3253246 + g 70 -10.1 -3.07816 | opp_overlap 3253217 3253215, overlap 3253221 CTCTAAGCGCTCGTT GTGCTGC TTA GCGGCAC TTCGGTGAGTAAGCG MADE_02999 3254242 - 3253340 - | signal peptidase I MADE_03000 3256038 - 3254242 - | GTP-binding protein LepA TERM 3378 3255617 - 3255635 + g 72 -5.2 -4.63932 | overlap 3255619 3255621 GCCACGCGGTCTGGT TCGGCCTG TGG CAGGTCAA TTTTGTTCAACACTG MADE_03001 3256683 - 3256237 - | sigma-E factor regulatory protein RseC TERM 3379 3256478 - 3256464 - G 72 -6.4 -4.19817 | opp_overlap 3256475 CTGAGGCACTTAAAA TACCCG CTT CAGGTA TACCTACGGTGACCT MADE_03002 3257681 - 3256695 - | putative anti sigma E (sigma 24) factor, negative regulator TERM 3380 3257498 - 3257477 - G 86 -11.7 -3.62096 | CGCCATGACGCCAAA GGTAAGGAA CCGT TTCCTTACC GGCAATTGTTTGAAC TERM 3381 3257846 - 3257822 - g 100 -13 -4.64861 | opp_overlap 3257824 3257826 CCGCCTTAAAACAAA CATACCAGCA GTATA TGCTGGTATG GTTAAAATATGAAAT MADE_03003 3257767 - 3257934 + | hypothetical protein MADE_03004 3258578 - 3257997 - | sigma E factor negative regulatory protein TERM 3382 3258421 - 3258437 + g 71 -7.3 -4.19238 | overlap 3258424 GTAATATCCAGCTGA GGAGCAA CAC TTGCTTC TTTTCGCATTGCACC MADE_03005 3258890 - 3258678 - | RNA polymerase sigma-70 factor MADE_03006 3259263 - 3258925 - | RNA polymerase sigma-70 factor MADE_03007 3259452 - 3261137 + | L-aspartate oxidase TERM 3383 3261217 - 3261199 - T 73 -9.6 -3.12668 | opp_overlap 3261199 CGGTAAACGCCAACA GGAGTAGA TGA CCTACTCC TTGGTAGTAAATGCG TERM 3384 3261199 - 3261217 + T 70 -8.9 -3.22298 | opp_overlap 3261199 CGGTAAACGCCAACA GGAGTAG ATGAC CTACTCC TTGGTAGTAAATGCG MADE_03008 3262086 - 3261211 - | MaoC domain protein dehydratase MADE_03009 3262453 - 3262091 - | hypothetical protein TERM 3385 3262287 - 3262297 + g 79 -8.2 -4.21812 | TGGTGAATTTTCATA GCGG TAC CCGC TTCTTTTGCCTCACG MADE_03010 3262832 - 3262632 - | TPR repeat protein MADE_03011 3263072 - 3263305 + | putative aminomethyltransferase TERM 3386 3264319 - 3264308 - T 76 -4.4 -5.08255 | ATCGGTAAAACAAAA GAAG ATAG CTTC AACGTTTCTGTTGAC TERM 3387 3264703 - 3264675 - T 75 -10.4 -3.05597 | opp_overlap 3264681, overlap 3264681 GTGATTTTTCAAAAC TAAAAAGGGAGC GTTCT GCTCCCTTTTTT AATGGAAAATGCTAA TERM 3388 3264697 - 3264681 - T 93 -9.4 -5.0925 | opp_overlap 3264681, overlap 3264675 TTTCAAAACTAAAAA GGGAGC GTTCT GCTCCC TTTTTTAATGGAAAA TERM 3389 3264681 - 3264697 + T 93 -10.1 -5.14563 | opp_overlap 3264681 3264675 TTTCAAAACTAAAAA GGGAGCG TTC TGCTCCC TTTTTTAATGGAAAA MADE_03014 3265069 - 3264731 - | GlnB MADE_03015 3265908 - 3265072 - | NAD synthetase MADE_03016 3266351 - 3266953 + | putative type IV pilus biogenesis protein MADE_03017 3267396 - 3267061 - | hypothetical protein TERM 3390 3267191 - 3267209 + g 76 -11.8 -2.66216 | opp_overlap 3267191, overlap 3267190 TTAATTTGACTAAAA CTGACGTT TTG AACGTCAG CTTGTGGTAGTGCAC TERM 3391 3267209 - 3267191 - G 95 -11.8 -4.28361 | opp_overlap 3267191 3267190 TTAATTTGACTAAAA CTGACGTT TTG AACGTCAG CTTGTGGTAGTGCAC TERM 3392 3267804 - 3267792 - gH 77 -7.7 -4.28049 | TGCAAAAGTGGAAAA TACGC ACT GCGTA ATAATAAGTGATGAC MADE_03018 3267532 - 3268086 + | hypothetical protein MADE_03019 3268047 - 3268709 + | putative prepilin peptidase dependent protein TERM 3393 3269187 - 3269205 + G 100 -10.2 -5.03314 | overlap 3269189 ATTCAATCGTGACGT GACAGCGC TGA GCGCTGAC TTTTTTCCCAGTAGC TERM 3394 3269189 - 3269203 + G 74 -11.4 -2.76422 | overlap 3269187 TCAATCGTGACGTGA CAGCGC TGA GCGCTG ACTTTTTTCCCAGTA MADE_03020 3268699 - 3269601 + | hypothetical protein MADE_03021 3269732 - 3269926 + | hypothetical protein TERM 3395 3269989 - 3269973 - T 70 -8.7 -3.40052 | opp_overlap 3269972 3269973 AGAGCGTTAACAAGA CCAGCAA TAT TCGCTGG ATTCTAGGCTACCAT MADE_03022 3270428 - 3269964 - | general secretion pathway protein H MADE_03023 3274498 - 3270431 - | Tfp pilus assembly protein tip-associated adhesin PilY1-like protein TERM 3396 3271238 - 3271226 - G 71 -7.7 -3.85698 | TTCCCCTTTGATAAA GTCTG CCC CAGAC TCACCATTGTAGATG TERM 3397 3271681 - 3271696 + g 81 -3.3 -5.31275 | GACCGCCTCGACGCA TACCT ACGTAA AGGTA TTTTTTATCATCGAC TERM 3398 3272533 - 3272511 - G 78 -5.4 -4.82901 | opp_overlap 3272511 3272514, overlap 3272514 3272515 TCTGCTTGATAAAAA CCACCGCCGC TTT GCAGCGCCAG TTGGTTTAGGAAGTT MADE_03024 3275070 - 3274507 - | hypothetical protein MADE_03025 3275918 - 3275067 - | pilin like competence factor TERM 3399 3275594 - 3275610 + g 75 -10.1 -3.62046 | CGCTAGACGTTTGCA CGCTGCC TAA GGTAGCG TTGTTAACAAAATCA MADE_03026 3276586 - 3275924 - | hypothetical protein TERM 3400 3276603 - 3276618 + r 71 -7.6 -3.86202 | opp_overlap 3276590, overlap 3276590 3276588 TACCTAGTGTTTCGC TTGGTG TTAT CACCAA TTTAGTATAGTAAGA TERM 3401 3276968 - 3276927 - R 95 -11.8 -4.58424 | opp_overlap 3276938, overlap 3276938 TACCAGTAGACAAAA GCATAAAAAAACACCGCA ACGAAG TGCGGTGTTTTTTTAAGT TCAAATAGGCTTTAT TERM 3402 3276938 - 3276957 + r 100 -9.3 -5.53288 | opp_overlap 3276927 3276938 AAAAGCATAAAAAAA CACCGCA ACGAAG TGCGGTG TTTTTTTAAGTTCAA TERM 3403 3276957 - 3276938 - R 100 -9.3 -5.77632 | opp_overlap 3276938, overlap 3276927 AAAAGCATAAAAAAA CACCGCA ACGAAG TGCGGTG TTTTTTTAAGTTCAA MADE_03027 3277934 - 3276990 - | 4-Hydroxy-3-methylbut-2-enyl diphosphate reductase MADE_03028 3278404 - 3277937 - | FKBP-type peptidyl-prolyl cis-trans isomerase (rotamase) TERM 3404 3278013 - 3277996 - G 71 -3.4 -4.87626 | opp_overlap 3278007 TTTCAACATCAAAAA TAACGG TTTGGC CCGCTA ACGGGTGGTTAAAAT MADE_03029 3278967 - 3278419 - | signal peptidase II TERM 3405 3278444 - 3278454 + g 71 -6.8 -4.18018 | GTTTCGCTACTATTT GCAG AGC CTGC TTTTGACTCCGCACC MADE_03030 3281731 - 3278960 - | isoleucyl-tRNA synthetase TERM 3406 3280360 - 3280348 - G 72 -9.1 -3.63059 | opp_overlap 3280346, overlap 3280344 GAACGTACAAAGGAA TGGGG ACA CCCCA CGTACGTTGGCGTGA TERM 3407 3280388 - 3280404 + g 70 -2.1 -5.09225 | opp_overlap 3280389, overlap 3280389 TGAAATACACCAATC AGGACGA CCT TCGACCA TTTTTTCAATGCGGT TERM 3408 3281229 - 3281239 + g 71 -6.8 -4.0641 | opp_overlap 3281219 GTACACCAATGTACT GGCT TAA AGCC TTTCTCTAAGTGACC MADE_03031 3282885 - 3282016 - | riboflavin biosynthesis protein RibF MADE_03032 3284562 - 3283045 - | MviN protein MADE_03033 3285078 - 3285236 + | 30S ribosomal protein S20 TERM 3409 3285239 - 3285223 - f 77 -8.7 -3.90729 | AAGAAGCTGCACAAA CGCCTAC ACT GTAGACG AACATACACATCGAC TERM 3410 3286249 - 3286266 + G 82 -5.5 -5.1287 | AATGAAACAGTTAGA CGTACCT ACCA AGGTCCG TTTTTTCAATATCAA MADE_03034 3285344 - 3286531 + | PII uridylyl-transferase MADE_03035 3286528 - 3287352 + | 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase TERM 3411 3287338 - 3287368 + T 83 -8.9 -4.07687 | opp_overlap 3287355 ATTAACGCTCTACTT CGCGGCGTTGAGT AAAAC GCTCACCGCAGCG TTTTAAAAAGCAAAT TERM 3412 3287418 - 3287383 - T 100 -13.4 -4.32046 | opp_overlap 3287385 3287392, overlap 3287385 3287392 GTTTTAAAAAGCAAA TACTAAAAAGAGGCGC TAAT GCGCCTCTTTTTTGTT TGTACTAACTTACAA TERM 3413 3287385 - 3287416 + T 100 -16 -3.99405 | opp_overlap 3287383 3287385 3287392, overlap 3287392 TTTAAAAAGCAAATA CTAAAAAGAGGCGC TAAT GCGCCTCTTTTTTG TTTGTACTAACTTAC TERM 3414 3287416 - 3287385 - T 100 -16 -3.7557 | opp_overlap 3287385 3287392, overlap 3287383 3287392 TTTAAAAAGCAAATA CTAAAAAGAGGCGC TAAT GCGCCTCTTTTTTG TTTGTACTAACTTAC TERM 3415 3287409 - 3287392 - T 100 -12.7 -4.946 | opp_overlap 3287392 3287385, overlap 3287385 3287383 AGCAAATACTAAAAA GAGGCGC TAAT GCGCCTC TTTTTTGTTTGTACT TERM 3416 3287392 - 3287409 + T 100 -12.7 -5.73978 | opp_overlap 3287385 3287383 3287392, overlap 3287385 AGCAAATACTAAAAA GAGGCGC TAAT GCGCCTC TTTTTTGTTTGTACT MADE_03036 3288029 - 3287580 - | flavodoxin MADE_03037 3288905 - 3288108 - | pseudouridylate synthase, 23S RNA-specific MADE_03038 3289240 - 3288902 - | hypothetical protein TERM 3417 3289480 - 3289449 - H 70 -3 -5.00895 | gap 1, overlap 3289451 3289454 CCTAGCATATAAAAA CACGAGGGCTTGTAG CAC CTA-AAGCCCAAGTA AATCAGCAGCCCCTA TERM 3418 3289662 - 3289647 - g 73 -4 -4.78848 | gap 1 TCTTGAAATAGAAAA CGC-TAG TGC CTATGCG CCCTACCCTCGCCAA MADE_03039 3289522 - 3290571 + | hypothetical protein MADE_03040 3290573 - 3290875 + | hypothetical protein TERM 3419 3290993 - 3290950 - T 100 -14 -4.17608 | opp_overlap 3290962, overlap 3290952 3290962 TGCACTTAAAAAACA CACCAAAAAAAAGGGGAACC TATG GGCTCCCCTTTTTCCTGGAA TTTTGAGTATCCTTC TERM 3420 3290991 - 3290952 - T 100 -18.8 -3.67773 | opp_overlap 3290962, overlap 3290950 3290962 CACTTAAAAAACACA CCAAAAAAAAGGGGAACC TATG GGCTCCCCTTTTTCCTGG AATTTTGAGTATCCT TERM 3421 3290962 - 3290981 + T 89 -9.2 -4.75404 | opp_overlap 3290962 3290952 3290950 ACACACCAAAAAAAA GGGGAACC TATG GGCTCCCC TTTTTCCTGGAATTT TERM 3422 3290981 - 3290962 - T 100 -11.4 -5.92337 | opp_overlap 3290962, overlap 3290952 3290950 ACACACCAAAAAAAA GGGGAACC TATG GGCTCCCC TTTTTCCTGGAATTT MADE_03041 3292497 - 3291850 - | predicted acetyltransferase, GNAT family MADE_03042 3293080 - 3292715 - | putative lipoprotein TERM 3423 3292806 - 3292818 + g 74 -3.4 -5.09225 | TCTTTTGTGGTAATC CCAT CTCCC ATGG TTTTTTGCGTACGGT MADE_03043 3293495 - 3293752 + | hypothetical protein MADE_03044 3294320 - 3293775 - | SecY interacting protein Syd MADE_03045 3294468 - 3295328 + | GTP cyclohydrolase I TERM 3424 3296302 - 3296291 - g 74 -5.8 -4.70107 | overlap 3296295 CATTAAAAGAACAAA CGCA GTTT TGCG TTGAAAAACTCGTCA TERM 3425 3296825 - 3296815 - g 83 -4 -5.38549 | overlap 3296823 TTCAAACAAGAAAAA GTAA AAA TTAC CGCCTCTTTTGGCGC MADE_03046 3295405 - 3296961 + | GGDEF domain protein MADE_03047 3296973 - 3298337 + | hypothetical protein TERM 3426 3298544 - 3298570 + G 78 -5 -5.01535 | overlap 3298548 3298551 TTCGCCTAATTTTAG CTGGCGTCGCGT TAT ACGCGGTGTTTG TTTTTATGGTTATCG TERM 3427 3298548 - 3298566 + G 100 -8.8 -5.00267 | overlap 3298544 3298551 CCTAATTTTAGCTGG CGTCGCGT TAT ACGCGGTG TTTGTTTTTATGGTT MADE_03048 3298513 - 3298887 + | SmpA/OmlA family lipoprotein TERM 3428 3299688 - 3299698 + G 70 -2.4 -5.07567 | opp_overlap 3299677 3299688 GCTAGGGTAAACCAA GGGG GCA CGCC TTTTTTACCCTCTAA MADE_03049 3298932 - 3300509 + | putative signal transduction protein MADE_03050 3300758 - 3301765 + | isocitrate dehydrogenase TERM 3429 3301824 - 3301809 - f 90 -10.4 -4.37527 | opp_overlap 3301809, overlap 3301775 3301774 CTATAACCACGAAAA CGGGCT CACT AGCCCG TTTTTTTGTCTAGAA TERM 3430 3301809 - 3301824 + F 100 -10.4 -5.71712 | opp_overlap 3301775 3301774 3301809 CTATAACCACGAAAA CGGGCT CACT AGCCCG TTTTTTTGTCTAGAA MADE_03051 3302149 - 3302466 + | late competence protein (DNA binding and uptake) TERM 3431 3302495 - 3302511 + T 93 -10.1 -5.10208 | opp_overlap 3302495 CCCACCCATAAAAAA TGCGCCT CTC GGGCGCA TTTTTCTTAAGCTTA TERM 3432 3302511 - 3302495 - T 100 -9.4 -5.28176 | opp_overlap 3302495 CCCACCCATAAAAAA TGCGCC TCTCG GGCGCA TTTTTCTTAAGCTTA MADE_03052 3303436 - 3302546 - | putative glucose-1-phosphate uridylyltransferase MADE_03053 3304605 - 3303727 - | Rhamnosyltransferase MADE_03054 3305489 - 3304602 - | glycosyltransferase TERM 3433 3305549 - 3305524 - R 93 -10.5 -5.13527 | opp_overlap 3305524 3305529, overlap 3305529 AAGTAACAAAGAAAA TAAAAGCGCTC ATAA GTGCGCTTTTA TTCGTCGGTATGTTA TERM 3434 3305524 - 3305549 + r 75 -10.5 -3.22068 | opp_overlap 3305524 3305529, overlap 3305529 AAGTAACAAAGAAAA TAAAAGCGCTC ATAA GTGCGCTTTTA TTCGTCGGTATGTTA TERM 3435 3305529 - 3305544 + r 80 -6 -4.72497 | opp_overlap 3305529 3305524, overlap 3305524 ACAAAGAAAATAAAA GCGCTC ATAA GTGCGC TTTTATTCGTCGGTA TERM 3436 3305544 - 3305529 - R 91 -6 -5.3689 | opp_overlap 3305524 3305529, overlap 3305524 ACAAAGAAAATAAAA GCGCTC ATAA GTGCGC TTTTATTCGTCGGTA MADE_03055 3306663 - 3305602 - | undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase TERM 3437 3306381 - 3306360 - G 70 -9.5 -2.95388 | opp_overlap 3306364, overlap 3306364 CACCGAACTGACACA TTAAGCGCC CTTT GGCACTTAA ATCAAAACGGTCGTC MADE_03056 3306899 - 3306657 - | hypothetical protein MADE_03057 3307258 - 3307554 + | hypothetical protein TERM 3438 3308020 - 3308045 + G 85 -6.9 -5.07486 | AAACTTTTCAGATGT TGTTACCGTGG ATAA TCAAGGTAACA TTTTTATTCCCAATA MADE_03058 3307559 - 3309388 + | capsular polysaccharide transport protein, putative TERM 3439 3309428 - 3309442 + G 76 -7.8 -4.2828 | TATATGCATGGAGAG GCGTGA TTT TCGCGC TTTTCCTGCGTGAGC TERM 3440 3309495 - 3309509 + G 72 -6.4 -4.34711 | GTTTGGGCTGGGATG GGCTTT TTT AGAGCC TTTTGCCTTCATTTT MADE_03059 3309391 - 3310170 + | KpsM protein MADE_03060 3310167 - 3310841 + | KpsT protein TERM 3441 3311878 - 3311897 + G 72 -5 -4.7268 | overlap 3311881 CGACAACGCTTATCC CACGGTTA TTTA TAACCTTG TTTTGTTCGGTGTTT TERM 3442 3311881 - 3311894 + G 70 -5.3 -4.44914 | overlap 3311878 CAACGCTTATCCCAC GGTTA TTTA TAACC TTGTTTTGTTCGGTG MADE_03061 3310853 - 3311971 + | putative capsule polysaccharide export system inner membrane protein TERM 3443 3311999 - 3312045 + F 76 -8.9 -3.78351 | gap 1, opp_overlap 3312002 3312003, overlap 3312002 GTACCTTAATAGCGA AAAG-GTCAATCGGCTACGT AGTTTAAG ACGTAGCCGATTGACACTGC TTTAATGAAGTTTAT TERM 3444 3312041 - 3312002 - f 100 -15.2 -4.28254 | opp_overlap 3311999 3312002, overlap 3312003 CCTTAATAGCGAAAA GGTCAATCGGCTACGT AGTTTAAG ACGTAGCCGATTGACA CTGCTTTAATGAAGT TERM 3445 3312002 - 3312042 + F 100 -15 -2.97439 | gap 1, opp_overlap 3312002 3312003, overlap 3311999 CCTTAATAGCGAAAA G-GTCAATCGGCTACGT AGTTTAAG ACGTAGCCGATTGACAC TGCTTTAATGAAGTT TERM 3446 3312040 - 3312003 - f 100 -18.7 -3.1647 | opp_overlap 3312002 3311999, overlap 3312002 CTTAATAGCGAAAAG GTCAATCGGCTACGT AGTTTAAG ACGTAGCCGATTGAC ACTGCTTTAATGAAG TERM 3447 3312343 - 3312331 - g 71 -7.7 -3.92522 | opp_overlap 3312327 3312331 CTGCAAGCTTACAAA CCCAA GGT TTGGG TTTTACTGTGGCAAC TERM 3448 3312331 - 3312343 + G 76 -7.7 -4.34402 | opp_overlap 3312331, overlap 3312327 CTGCAAGCTTACAAA CCCAA GGT TTGGG TTTTACTGTGGCAAC MADE_03062 3312261 - 3313712 + | putative proton-dependent peptide transporter TERM 3449 3313783 - 3313759 - f 100 -15.7 -3.79113 | opp_overlap 3313759 ATTCTTCTACAATAA CCGCCGCAACG TTA CGTTCCGGCGG TTTTTTATTAAGGGC TERM 3450 3313759 - 3313783 + F 100 -15.7 -5.4505 | opp_overlap 3313759 ATTCTTCTACAATAA CCGCCGCAACG TTA CGTTCCGGCGG TTTTTTATTAAGGGC MADE_03063 3313812 - 3314114 + | hypothetical protein TERM 3451 3314413 - 3314389 - g 79 -7.9 -4.4017 | TGAATCGGTACAAAA GCCGCTTTCGT ACT ACGAAAACAAC GTGTACGGTACGCTT MADE_03064 3314111 - 3315133 + | UDP-glucose 4-epimerase TERM 3452 3315227 - 3315208 - T 100 -12.2 -6.12328 | opp_overlap 3315208 AGAATATAAAAAAAA CGCTATGC AATT GCATAGCG TTTTTTTATAAATAC TERM 3453 3315208 - 3315227 + T 100 -12.2 -5.64274 | opp_overlap 3315208 AGAATATAAAAAAAA CGCTATGC AATT GCATAGCG TTTTTTTATAAATAC MADE_03065 3316201 - 3315287 - | Surface lipoprotein MADE_03066 3317490 - 3316204 - | putative cytochrome c-type biogenesis protein MADE_03067 3318017 - 3317487 - | Cytochrome c-type biogenesis protein CcmH TERM 3454 3318022 - 3318036 + r 70 -5.6 -4.4767 | AGTAGTTTCATTGCA GCCCTC CCT GAGCGC TTTTATCATCGCTCA MADE_03068 3318673 - 3318014 - | thiol:disulfide interchange protein dsbE (cytochrome c biogenesis protein ccmG) MADE_03069 3320730 - 3318673 - | Cytochrome c biogenesis factor MADE_03070 3321228 - 3320734 - | Cytochrome c-type biogenesis protein CcmE MADE_03071 3321496 - 3321275 - | heme exporter protein CcmD TERM 3455 3321326 - 3321340 + g 80 -7 -4.56597 | overlap 3321312 3321311 3321328 TCGCGCTTTTTTAAT GCGCGC TTT GCGCTC TTTTTCCACCACAAC TERM 3456 3321328 - 3321338 + g 74 -8.2 -3.90048 | overlap 3321312 3321311 3321326 GCGCTTTTTTAATGC GCGC TTT GCGC TCTTTTTCCACCACA MADE_03072 3322280 - 3321498 - | heme exporter protein C MADE_03073 3322945 - 3322280 - | ABC type heme exporter, permease subunit ccmB MADE_03074 3323655 - 3322945 - | ATP binding protein of heme exporter A TERM 3457 3324715 - 3324698 - g 82 -7.1 -4.88736 | CATGACTCATAAAAA TGTAAGT ACCA ACTTACA ACAACAGCTCACTTC MADE_03075 3323877 - 3326462 + | hypothetical protein TERM 3458 3326554 - 3326539 - g 79 -4 -5.18726 | gap 1 TGGCGATAAGAAAAA CAC-ACC GAA GGTCGTG TCCAAAGGCTATGGA MADE_03076 3326474 - 3326791 + | uncharacterized C-terminal FlhB domain-containing protein TERM 3459 3326912 - 3326893 - T 84 -10 -3.91911 | opp_overlap 3326866 3326893 TCTATTGTAACTAAA TAGCCCGC TATT ACGGGCTA TTTTTAAATGAGTGT TERM 3460 3326893 - 3326912 + T 89 -9.3 -4.67755 | opp_overlap 3326893, overlap 3326866 TCTATTGTAACTAAA TAGCCCG CTATTA CGGGCTA TTTTTAAATGAGTGT MADE_03077 3328142 - 3326946 - | putative ABC-type Na+ efflux pump, permease component MADE_03078 3328947 - 3328126 - | sodium ABC exporter ATP-binding protein TERM 3461 3329225 - 3329210 - R 100 -10.4 -5.76633 | opp_overlap 3329210 GCAGATACAAAAAAA CCCACC AAAG GGTGGG TTTTTAATCGCTATG TERM 3462 3329210 - 3329225 + r 93 -10.4 -4.76041 | opp_overlap 3329210 GCAGATACAAAAAAA CCCACC AAAG GGTGGG TTTTTAATCGCTATG MADE_03079 3330298 - 3329252 - | RecA protein (Recombinase A) MADE_03080 3330958 - 3330419 - | CinA-like protein TERM 3463 3331175 - 3331186 + G 74 -5.8 -4.64144 | TATTCTACTTTTTTA TCGC ATGG GCGA TTTTTACGAGTTATT MADE_03081 3331119 - 3333710 + | DNA mismatch repair protein(MutS) TERM 3464 3334442 - 3334432 - g 71 -6.8 -4.10161 | opp_overlap 3334430 3334432 CAGCACTCGGTAAAA GAGC TTC GCTC TATTGGTATTCAGCC TERM 3465 3335217 - 3335203 - g 70 -5 -4.47551 | overlap 3335211 3335213 ATTGAAGGGACAAAA GTACAC GAG ATGTAC GGCAACGCTGAGATT MADE_03082 3333847 - 3335478 + | CTP synthetase TERM 3466 3335515 - 3335491 - f 81 -7.1 -4.65747 | opp_overlap 3335490 TAATTTCTAATAAAA GGGGCGC TCTCTCCCGTT GCGCCCC ATTACATTGTTGAGG TERM 3467 3336349 - 3336334 - g 72 -4.7 -4.66537 | opp_overlap 3336334, overlap 3336329 CTGGCGAAGACAAAA GCTTC GATTCA GAAGC GTTTGGCGACTACCT MADE_03083 3335538 - 3336830 + | phosphopyruvate hydratase TERM 3468 3336856 - 3336873 + F 100 -8.4 -5.82281 | opp_overlap 3336855 3336856 TTAAAATGATGAAAG GCCGCT TAATAT AGCGGC TTTTTTTGTCTGTTT MADE_03084 3336975 - 3337715 + | hypothetical protein TERM 3469 3338118 - 3338090 - f 95 -14.7 -2.66451 | opp_overlap 3338096, overlap 3338096 AGCGATTCAAATTCA CAAAAACCCGTGC CAA GCACGGGTTTTTT TTTAACTATTTAACT TERM 3470 3338112 - 3338096 - f 100 -13.7 -4.94992 | opp_overlap 3338096, overlap 3338090 TCAAATTCACAAAAA CCCGTGC CAA GCACGGG TTTTTTTTTAACTAT TERM 3471 3338096 - 3338112 + F 100 -13.7 -6.13 | opp_overlap 3338096 3338090 TCAAATTCACAAAAA CCCGTGC CAA GCACGGG TTTTTTTTTAACTAT MADE_03085 3338157 - 3339704 + | 2-isopropylmalate synthase MADE_03086 3339705 - 3340802 + | 3-isopropylmalate dehydrogenase TERM 3472 3341775 - 3341761 - g 76 -4.2 -4.91473 | CAATTGAAAAAGAAA GCGC GGTAAAA GCGC TGGAGTACATGGGCT TERM 3473 3342166 - 3342181 + G 74 -6.8 -4.28361 | overlap 3342145 CAATGGCTGCGGCCG CGGCTA TCAC TGGCCG TTTTGCTGACGTTAG MADE_03087 3340812 - 3342212 + | isopropylmalate isomerase large subunit MADE_03088 3342216 - 3342821 + | isopropylmalate isomerase small subunit TERM 3474 3342844 - 3342879 + F 100 -14.2 -3.86202 | overlap 3342845 3342847 CTGCTTACCCCATAC CCAGGTGAATGCTATT ACCA AGTAGCATTCACCTGC TTTCCTCTACTGCAA TERM 3475 3342845 - 3342878 + F 100 -17.7 -2.914 | overlap 3342844 3342847 TGCTTACCCCATACC CAGGTGAATGCTATT ACCA AGTAGCATTCACCTG CTTTCCTCTACTGCA TERM 3476 3342847 - 3342876 + F 95 -14.5 -3.00585 | overlap 3342845 3342844 CTTACCCCATACCCA GGTGAATGCTATT ACCA AGTAGCATTCACC TGCTTTCCTCTACTG MADE_03089 3343099 - 3344286 + | metal-dependent phosphohydrolase domain MADE_03090 3345696 - 3344449 - | General secretion pathway protein B MADE_03091 3346462 - 3345689 - | putative ATPase and membrane protein TERM 3477 3346405 - 3346415 + g 71 -6.8 -4.1552 | TATTATCCGGCAGCT GCTG CAA CAGC TTTCTTGAAACCGTG TERM 3478 3346530 - 3346500 - H 79 -9.6 -3.71917 | opp_overlap 3346501 3346503 AGTCCAAATGTTAAA TGAGCCAACGCCTC TTT GTGTCGTGGGCTCA TATACAAATAATCGG TERM 3479 3347174 - 3347162 - g 72 -2.7 -5.0133 | TATGGTGGTAAAAAA GATTT AGA AAACC ACCTACTTCGCCACG TERM 3480 3347500 - 3347487 - g 73 -4.5 -4.81551 | TAGCCACATTAAAAA CAGCG GTAG CGCTA GAAAATGCCGCAAAA TERM 3481 3347591 - 3347568 - g 72 -5.4 -4.54727 | gap 1, overlap 3347570 CGCTTGAAACCAAAA TACCTGAA-AG CAG CTCTTCAGGCA CAACTACCCTCATAA TERM 3482 3347900 - 3347890 - g 80 -6.8 -4.62984 | GGAGCACATAGAAAA CGCT TTG AGCG CGGCCAACCAAGTAA MADE_03092 3346820 - 3348013 + | tRNA nucleotidyltransferase TERM 3483 3348601 - 3348587 - g 72 -5.6 -4.46215 | opp_overlap 3348586 CACATTGAAAAAGAA GCGGCA GAC TGTCGC GATATTGAATGTTTA MADE_03093 3348164 - 3349390 + | ATP-dependent RNA helicase SrmB TERM 3484 3349501 - 3349474 - f 100 -13.4 -4.0371 | overlap 3349475 CATTGCCGACACAAA CCCTCTGCCGCA GGGA TGCGGCAGCGGA GCGCACATGGATGTG TERM 3485 3349500 - 3349475 - f 100 -14.7 -3.01905 | overlap 3349474 ATTGCCGACACAAAC CCTCTGCCGCA GGGA TGCGGCAGCGG AGCGCACATGGATGT MADE_03094 3349601 - 3350203 + | putative deoxyribonucleotide triphosphate pyrophosphatase TERM 3486 3350656 - 3350646 - g 71 -6.8 -4.18164 | opp_overlap 3350655, overlap 3350647 AACGCGGTAAAACAA GCAC ATA GTGC GGGGTTGCCCACGTT MADE_03095 3350310 - 3351335 + | putative oxygen-independent coproporphyrinogen III oxidase TERM 3487 3351357 - 3351374 + T 82 -8.4 -4.28762 | opp_overlap 3351357 GTTAATACTAAAAAA GCCTGC GTTTTA GCAGGC TTTTCGTGAGGTTCT TERM 3488 3351374 - 3351357 - T 93 -8.4 -5.27779 | opp_overlap 3351357 GTTAATACTAAAAAA GCCTGC GTTTTA GCAGGC TTTTCGTGAGGTTCT MADE_03096 3352260 - 3351460 - | hypothetical protein TERM 3489 3352451 - 3352424 - R 93 -11.4 -4.19746 | opp_overlap 3352428, overlap 3352428 GCTAGCCTAAAACAA CAAAGCACGC ATTATAGA GCGTGCTTTG ATGATAAAAAGTCTT TERM 3490 3352447 - 3352428 - R 80 -6.4 -4.67697 | opp_overlap 3352428, overlap 3352424 GCCTAAAACAACAAA GCACGC ATTATAGA GCGTGC TTTGATGATAAAAAG MADE_03097 3353075 - 3352512 - | putative Fimh-like protein MADE_03098 3354853 - 3353078 - | putative orphan protein MADE_03099 3355435 - 3354944 - | sensory box/GGDEF protein TERM 3491 3355203 - 3355219 + g 73 -2.2 -5.14563 | overlap 3355204 GCGCGTGTTTTTAAG TCGAAG ACAGG CTTCGC TTTTTTCATAAACCA MADE_03100 3356430 - 3355435 - | response regulator MADE_03101 3357421 - 3356711 - | LrgB-like protein TERM 3492 3357402 - 3357420 + g 84 -10.4 -3.95153 | opp_overlap 3357398 CGTAAACTAAAGGCG TGATTGAG CGC CTCAATCA TTTGTACCTCCTTCG MADE_03102 3357827 - 3357414 - | LrgA MADE_03103 3358762 - 3358001 - | Response regulator of the LytR/AlgR family protein TERM 3493 3358884 - 3358862 - R 93 -9.8 -5.03314 | overlap 3358863 GTTAGCGTGAAAAAA GGGGCTACGC ATT ACGTAGCCCA ATTGCCAGGGCATAA TERM 3494 3358883 - 3358863 - R 95 -13.3 -3.61506 | overlap 3358862 TTAGCGTGAAAAAAG GGGCTACGC ATT ACGTAGCCC AATTGCCAGGGCATA MADE_03104 3359235 - 3358909 - | hypothetical protein MADE_03105 3359924 - 3359595 - | putative orphan protein MADE_03106 3360032 - 3360166 + | hypothetical protein MADE_03107 3361032 - 3360223 - | hypothetical protein MADE_03108 3361111 - 3361239 + | hypothetical protein MADE_03109 3361734 - 3361612 - | hypothetical protein MADE_03110 3361909 - 3362628 + | Zeta toxin MADE_03111 3362649 - 3362828 + | hypothetical protein MADE_03112 3363743 - 3363630 - | type I site-specific deoxyribonuclease, HsdR family TERM 3495 3364019 - 3364035 + G 71 -3.7 -4.81249 | ATTGAAAAAAGTGTA GCGAT TTTTCTT ATCGC TTTTTCCATTTCACA MADE_03113 3363896 - 3365044 + | probable transporter TERM 3496 3365173 - 3365153 - f 91 -6.1 -5.40072 | opp_overlap 3365156, overlap 3365154 TTGGTTTTAAAAAAA CCATCCCCA TTA TGGAGATGC TTCCGAAGTGGTTGG TERM 3497 3365172 - 3365154 - f 83 -9.6 -3.83561 | opp_overlap 3365156, overlap 3365153 TGGTTTTAAAAAAAC CATCCCCA TTA TGGAGATG CTTCCGAAGTGGTTG MADE_03114 3365221 - 3365799 + | Outer membrane protein, porin family TERM 3498 3365833 - 3365852 + T 100 -12.2 -5.14563 | opp_overlap 3365826 3365837, overlap 3365827 TGTGAACACTGTGAA GCCACGTT GTGT AACGTGGC TTTTTTGATGCCAAA TERM 3499 3365932 - 3365942 + T 80 -8.2 -4.35461 | overlap 3365921 GGCTTGCCTACGTTT GCCG TGG CGGC TTTTCCTGATATTGC MADE_03115 3367060 - 3365924 - | MscS Mechanosensitive ion channel TERM 3500 3367223 - 3367196 - R 100 -9.8 -5.31275 | opp_overlap 3367196 GTCGAGCATAAAAAA GCCCCATGCTGT TCAT ACGACACGGGGC TTAATAAACGTGTGT MADE_03116 3367787 - 3367674 - | hypothetical protein MADE_03117 3368083 - 3367871 - | hypothetical protein MADE_03118 3369088 - 3368162 - | FOG: TPR repeat 2396 protein TERM 3501 3369048 - 3369069 + g 79 -8.7 -4.23758 | opp_overlap 3369050, overlap 3369050 AAAAGTAACAGAGAA AAGCCTGCT AAAA AGCAGGCTC TTTTAAATATGGCAT TERM 3502 3369067 - 3369050 - G 95 -11.3 -4.70453 | opp_overlap 3369048 3369050 AAGTAACAGAGAAAA GCCTGCT AAAA AGCAGGC TCTTTTAAATATGGC TERM 3503 3369050 - 3369067 + g 86 -11.3 -3.71913 | opp_overlap 3369050, overlap 3369048 AAGTAACAGAGAAAA GCCTGCT AAAA AGCAGGC TCTTTTAAATATGGC MADE_03119 3369473 - 3369093 - | hypothetical protein MADE_03120 3369656 - 3369543 - | hypothetical protein TERM 3504 3370062 - 3370074 + G 71 -7.7 -3.93658 | TATCACCATGCAGTT TGGCT CTA AGCCA TTATTTGAAAATATT TERM 3505 3370537 - 3370513 - g 76 -4.1 -5.00616 | opp_overlap 3370513, overlap 3370515 GCCCCGGGTAAAAAA GTGCGTGTGCT TTT AGCCCAAGCGC TATTCGCTGAACCGG MADE_03121 3370030 - 3371622 + | ABC transporter ATP-binding protein TERM 3506 3371631 - 3371657 + T 83 -6.5 -5.01732 | opp_overlap 3371636, overlap 3371636 CGCGTAGATAACGAG AAAAAGGGGCG TTCAT CGCCCCTTTAG TTTTTTAAAGAACTT TERM 3507 3371636 - 3371652 + T 91 -10.8 -4.42765 | opp_overlap 3371636, overlap 3371631 AGATAACGAGAAAAA GGGGCG TTCAT CGCCCC TTTAGTTTTTTAAAG TERM 3508 3371652 - 3371636 - T 93 -10.8 -5.02439 | opp_overlap 3371636 3371631 AGATAACGAGAAAAA GGGGCG TTCAT CGCCCC TTTAGTTTTTTAAAG MADE_03122 3372616 - 3371702 - | hypothetical protein TERM 3509 3372503 - 3372515 + g 78 -4.8 -5.00412 | CATCTTTGTTCCTTT GTGC TTTTT GCAC TTTTTAATTATATTT TERM 3510 3373011 - 3373043 + G 72 -9.3 -3.53811 | overlap 3373012 GGGCACCGTTATGCA CTGGCTCAGTTTATT TGC AATAAAATGAGCCAA TTTACCGACCATAAA TERM 3511 3373012 - 3373042 + G 78 -12.8 -2.72144 | overlap 3373011 GGCACCGTTATGCAC TGGCTCAGTTTATT TGC AATAAAATGAGCCA ATTTACCGACCATAA MADE_03123 3372903 - 3373250 + | hypothetical protein TERM 3512 3374184 - 3374230 + G 71 -8 -3.88985 | gap 1 TGATGACAGTATTAG CGA-CAGCCCGCTTACCGACG ATGATA CGTCGTTGAGCGCGATGCTCG TTTATACCCGCTTTT MADE_03124 3373483 - 3374250 + | hypothetical protein TERM 3513 3374343 - 3374291 - T 76 -10.9 -2.55392 | gap 1, opp_overlap 3374307, overlap 3374278 3374287 3374307 AATGTAGCGAAGCTA CCTTGCAGCAT-AAAAATGCCCTC GGTCTT GAGGGCATTTTCGATAGTGCAAAG TAAATGTTTTTAAGC TERM 3514 3374307 - 3374326 + T 89 -10 -4.21194 | opp_overlap 3374307 3374291 CTTGCAGCATAAAAA TGCCCTCG GTCT TGAGGGCA TTTTCGATAGTGCAA TERM 3515 3374326 - 3374307 - T 90 -9.3 -4.91109 | opp_overlap 3374307, overlap 3374291 CTTGCAGCATAAAAA TGCCCTC GGTCTT GAGGGCA TTTTCGATAGTGCAA MADE_03125 3374865 - 3374353 - | creA protein MADE_03126 3376564 - 3374948 - | histidine ammonia-lyase TERM 3516 3375567 - 3375541 - G 77 -3.7 -5.1356 | opp_overlap 3375545 TGCTATCAACAAAAA CCAATGGGTTA TCACT TACCCCATTTG CCTCTACAACTAAAA MADE_03127 3378258 - 3376567 - | urocanate hydratase TERM 3517 3376701 - 3376725 + g 70 -9.2 -3.32498 | overlap 3376697 CAGGGTCGTTATGCA GCACCCGCGC TATAC GTGCGGCTGC TTCATCTGTACCGTC MADE_03128 3379063 - 3378323 - | histidine utilization repressor TERM 3518 3378512 - 3378526 + g 76 -5 -4.85599 | AGATTTGATAAGCAG GGCATT GGC AATGTC TTTTTCTACAATCAC TERM 3519 3378937 - 3378949 + g 72 -10.5 -2.79183 | CTACCATTTCACTTA GCGCG CGA CGCGC TGTCATACGACTAAC TERM 3520 3379144 - 3379121 - H 85 -12.6 -3.10876 | opp_overlap 3379113 3379111 3379110, overlap 3379111 AATAATATGCTAACA GCATACTTGT ATAT ACAAGTATGC ACAAGTACACTTCAT MADE_03129 3379224 - 3380483 + | imidazolonepropionase TERM 3521 3381410 - 3381442 + G 78 -6.1 -4.57569 | opp_overlap 3381407, overlap 3381411 3381413 CTTACTATGATATTG ACAGCCGCACAGCCA AAC TGGCTGCACGGCTAA TTTTTGAAGCGGTGG TERM 3522 3381411 - 3381441 + G 73 -9.6 -3.3422 | opp_overlap 3381407, overlap 3381410 3381413 TTACTATGATATTGA CAGCCGCACAGCCA AAC TGGCTGCACGGCTA ATTTTTGAAGCGGTG TERM 3523 3381413 - 3381439 + G 81 -12.2 -3.23708 | opp_overlap 3381407, overlap 3381411 3381410 ACTATGATATTGACA GCCGCACAGCCA AAC TGGCTGCACGGC TAATTTTTGAAGCGG MADE_03130 3380476 - 3381480 + | probable arginase family protein MADE_03131 3381605 - 3381477 - | hypothetical protein MADE_03132 3382801 - 3381581 - | sodium/dicarboxylate symporter MADE_03133 3383606 - 3382938 - | hypothetical protein MADE_03134 3384337 - 3383849 - | hypothetical protein TERM 3524 3384175 - 3384196 + g 83 -4.3 -5.37043 | AGATGGCATTATTGT GGGCGGAAT AAAG GTCCTGCCC TTTTTTCTCTACGCT TERM 3525 3384479 - 3384447 - R 81 -12 -2.50816 | opp_overlap 3384446 3384447, overlap 3384446 GTTTTAGCTACTAAT CCCTAAGCGGTGAG TTCAC CCCACCGCATAAGG CTTTTCTAGTGCACT MADE_03135 3388178 - 3384462 - | exonuclease SbcC TERM 3526 3385182 - 3385212 + g 78 -6.2 -4.61566 | gap 1, overlap 3385155 3385182 3385181 CTGTGCATGGTCACG CGCTGTTAGCGAT TGCTGT GTCGCTAGC-GCG TTTTCTAGTTTAAGG TERM 3527 3387729 - 3387717 - G 76 -9.1 -3.83169 | overlap 3387708 3387712 TAGAAAGGCAGCAAA GTCGC CCT GCGAC AACATCATAGATTTT MADE_03136 3389737 - 3388190 - | exonuclease SbcD TERM 3528 3388512 - 3388529 + g 73 -4.1 -4.78752 | overlap 3388513 TTACGCATGCGTTTT AGCTGAA GAAT TTCAGCG TTTTTACCTTCTAAT TERM 3529 3388617 - 3388633 + g 78 -5.9 -4.86621 | overlap 3388618 CACAACCACACGGGG TCTTTTG AGC CAAAAGG TTTTTCGTTAGAACT TERM 3530 3389942 - 3389930 - R 70 -3.3 -4.9138 | opp_overlap 3389930 AGTAGCCAAATAAAA CCGTT CAC ACCGG TTGATAAATATTGTC MADE_03137 3391226 - 3389934 - | putative orphan protein; putative membrane protein TERM 3531 3391386 - 3391408 + H 73 -9.8 -3.18366 | opp_overlap 3391385, overlap 3391383 3391382 CAAACAGCGAACGAG GGGCTGTTGA TAA TCACCGGCCC TCTGTTAGTTAACAC TERM 3532 3391534 - 3391522 - g 88 -3.4 -5.73563 | opp_overlap 3391522 ACGAAATTAAAAAAA GCAA ATTCA TTGC TTGTGCCGGCTTTGC MADE_03138 3391449 - 3392069 + | hypothetical protein TERM 3533 3392154 - 3392137 - T 70 -9.1 -3.09823 | opp_overlap 3392150, overlap 3392121 3392132 3392148 CTCGGTAAAACCACA GGCACTG GAAA CAGCGCC AGGTGAATCCCACCT TERM 3534 3392176 - 3392148 - T 89 -11.7 -3.61654 | opp_overlap 3392150, overlap 3392137 3392132 CACAGGCACTGGAAA CAGCGCCAGGTGA ATC CCACCTACCGCTG TTAAAACATCAAAAA MADE_03139 3392728 - 3392192 - | thioredoxin peroxidase TERM 3535 3392849 - 3392866 + r 86 -7.1 -5.1287 | CGTTCAGATCGCCTT TTTGAAC AATC GTTCAAA TTTTTTCGATGTAAA TERM 3536 3392955 - 3392937 - R 100 -11.7 -5.76633 | opp_overlap 3392937 CGAGAGATAAAAAAA GCAGCGC CGAAT GCGCTGC TTTTTTGTGTGGCAA TERM 3537 3392937 - 3392955 + r 100 -11.7 -5.36441 | opp_overlap 3392937 CGAGAGATAAAAAAA GCAGCGC CGAAT GCGCTGC TTTTTTGTGTGGCAA MADE_03140 3394930 - 3392999 - | putative cold-active aminopeptidase; secreted using a signal peptide TERM 3538 3393085 - 3393096 + g 71 -3.6 -4.7497 | opp_overlap 3393080 GCTTCGCAAACGCCT TGCC GTCG GGCG TTTTTGATAGCTCAC TERM 3539 3394766 - 3394786 + g 74 -3.9 -4.98255 | ATAGTCTACGCCAGA CGCAATGGT AGC ATCGTCGCG TTTTTCTGCTTCGAC TERM 3540 3395140 - 3395157 + r 71 -9.8 -2.77899 | opp_overlap 3395128 3395138 3395134 3395140, overlap 3395137 CTACGTAAATGAATA CGCCCG CTGTAA CGGGCG TGATTACTGAACCCG TERM 3541 3395157 - 3395140 - R 77 -10.5 -3.34609 | opp_overlap 3395140 3395137, overlap 3395128 3395138 3395134 CTACGTAAATGAATA CGCCCGC TGTA ACGGGCG TGATTACTGAACCCG MADE_03141 3395612 - 3395184 - | putative organic hydroperoxide resistance protein TERM 3542 3395983 - 3395972 - g 79 -4.4 -5.1615 | CTAATACTTAAAAAA CTTG AGGA CAAG GACTTCTTAATGGTT MADE_03142 3395750 - 3396190 + | putative OhrR transcriptional regulator, MarR/EmrR family protein MADE_03143 3396379 - 3397035 + | putative hemolysin III TERM 3543 3397472 - 3397491 + G 71 -7.2 -4.02817 | gap 1 ATTTGCACTGCGATG GCTCACAGC ACC GCTGT-AGC TTGTTATTCTACGCA MADE_03144 3397129 - 3397644 + | hypothetical protein TERM 3544 3397681 - 3397656 - T 89 -6.8 -5.26316 | opp_overlap 3397656 GTAGTCTATAAAAAA GCGGCTACAC GCAAGG GTTCAGCCGC TTTGAATAAAGACTA MADE_03145 3398593 - 3397721 - | Transcriptional regulator of lysR family protein TERM 3545 3399651 - 3399637 - g 70 -10 -3.05046 | overlap 3399636 GGACCTTGCGAAAAT TCACGC CGA GCGTGA GAAAGAATTAGAGAA MADE_03146 3398990 - 3399937 + | Universal stress protein, UspA TERM 3546 3400001 - 3399978 - T 100 -18.2 -5.4659 | opp_overlap 3399978 GAACACAAACAAAAA GGCCGCGCTT CAAG AAGCGCGGCC TTTTTTTATATCTAC TERM 3547 3399978 - 3400001 + T 100 -18.2 -5.76633 | opp_overlap 3399978 GAACACAAACAAAAA GGCCGCGCTT CAAG AAGCGCGGCC TTTTTTTATATCTAC MADE_03147 3401310 - 3400039 - | Phosphate permease MADE_03148 3402391 - 3401651 - | phosphate transport system regulatory protein PhoU TERM 3548 3401809 - 3401823 + g 73 -2.1 -5.24449 | CATCCAGCCAATCCT GCATA TCGTC TGTGC TTTTTTGCATTTCTG MADE_03149 3403258 - 3402452 - | phosphate ABC transporter, ATP-binding protein TERM 3549 3403195 - 3403175 - G 72 -9.1 -3.63251 | ACTACCAAACCATAA GTTGAGATT TTT AACCTCAAC GGCAGTTTGCTCTTC MADE_03150 3404835 - 3403276 - | phosphate ABC transporter, permease protein MADE_03151 3407011 - 3404828 - | putative phosphate ABC transporter, permease protein TERM 3550 3405115 - 3405087 - G 72 -6.7 -4.25848 | AACGCCCGACCAAAA CCCAGCATAATAG CCG CTACAATACCGGG CAGGGCTACGTGTAA TERM 3551 3405268 - 3405282 + g 76 -8.6 -4.11216 | opp_overlap 3405277 CGCCTAACGCCAATG CAACCA CAA TGGTTG TTTTACCAATAGGGC TERM 3552 3406437 - 3406414 - G 77 -6.8 -4.43477 | gap 1, opp_overlap 3406425, overlap 3406415 3406416 CCCATCTAACGAAAA CG-CTATCACC ATG GGTGATAGACA CCACCGCCCACTTTG TERM 3553 3406434 - 3406416 - G 76 -11.8 -2.54881 | opp_overlap 3406425, overlap 3406415 3406414 CATCTAACGAAAACG CTATCACC ATG GGTGATAG ACACCACCGCCCACT TERM 3554 3407599 - 3407611 + G 74 -5.5 -4.59773 | opp_overlap 3407589 3407588 3407599, overlap 3407588 GAAAGCGCGCCAAAT TGGGG CAG CCTCA TTTTTAAAGCTAAAG MADE_03152 3407221 - 3407727 + | ACT domain protein TERM 3555 3408478 - 3408463 - g 88 -7.6 -5.07486 | GAGCCGTAAGAAAAA GAGCAT TGTT ATGCTC GATGACATGATTCAG MADE_03153 3407870 - 3409942 + | polyphosphate kinase MADE_03154 3409959 - 3411521 + | putative exopolyphosphatase TERM 3556 3411568 - 3411592 + T 100 -15.9 -4.1822 | opp_overlap 3411575 AGCTCACCAGGTTTA GGGCAAATACA GAC TGTATTTGCCC TTTCTTGCAATGCCC TERM 3557 3411615 - 3411631 + T 78 -10.9 -2.93073 | overlap 3411612 CAATGCCCTACTTTT TGACAGC GTC GCTGTCA TACTTCTTGAACCAC MADE_03155 3413664 - 3411607 - | Acylaminoacyl-peptidase TERM 3558 3412485 - 3412497 + g 76 -9.1 -3.83026 | ACAAATCTGCAGGCC GGTCG GTA CGACC TTTGGTGTAGGCCAC MADE_03156 3413948 - 3414397 + | hypothetical protein TERM 3559 3414443 - 3414427 - T 100 -13.7 -5.33405 | opp_overlap 3414427 GTGACTAAATAAAAA GAGCGCC AAC GGCGCTC TTATAAGGTGTCAAT TERM 3560 3414427 - 3414443 + T 95 -13.7 -3.3514 | opp_overlap 3414427 GTGACTAAATAAAAA GAGCGCC AAC GGCGCTC TTATAAGGTGTCAAT MADE_03157 3415379 - 3414480 - | fructose-bisphosphate aldolase TERM 3561 3415705 - 3415721 + r 82 -8.7 -4.27316 | overlap 3415706 TTTTTCTTCTAGTAC TGCTACC GCT GGTAGCG TTTTGCCTTCCAAAA TERM 3562 3415706 - 3415720 + r 75 -10 -3.16068 | overlap 3415705 TTTTCTTCTAGTACT GCTACC GCT GGTAGC GTTTTGCCTTCCAAA MADE_03158 3416856 - 3415681 - | 3-phosphoglycerate kinase TERM 3563 3416211 - 3416197 - G 71 -7.2 -4.15044 | TTGCGCTGCAATAAA GGTATT GGC AATACC GCCACCAACAATAAG TERM 3564 3416957 - 3416926 - R 88 -11.5 -3.6288 | opp_overlap 3416921 AAATTAACTGTGAAA GCTGCGCGGGCTG TGCTAC CAGCCCTGGCAGC ATCAATGCGTTATTT MADE_03159 3417977 - 3416967 - | D-erythrose 4-phosphate dehydrogenase TERM 3565 3417526 - 3417536 + g 79 -4 -5.11063 | GTGGTGCACGAACCG TTAG AGA CTAA TTTTTGTTCACTGGT TERM 3566 3417831 - 3417808 - G 76 -8 -4.35518 | opp_overlap 3417806 3417808 3417816, overlap 3417813 AAGGCCACATCAAAA CGGAACCGCC CGTG GGCGGTGTCG TATTTAAGTAAATGT TERM 3567 3417808 - 3417831 + g 77 -10.2 -3.41836 | opp_overlap 3417808 3417813, overlap 3417806 3417816 AAGGCCACATCAAAA CGGAACCGCC CGTG GGCGGTGTCG TATTTAAGTAAATGT TERM 3568 3417826 - 3417813 - G 73 -9.5 -3.40592 | opp_overlap 3417808 3417806 3417816, overlap 3417808 CACATCAAAACGGAA CCGCC CGTG GGCGG TGTCGTATTTAAGTA TERM 3569 3417901 - 3417929 + g 70 -10.3 -2.52543 | ACGTTGAATTCGTTA TTGCGCCCACTTT CAT AAAGCGCGCGCAA TACGTTACGACCAAT MADE_03160 3419987 - 3417996 - | transketolase 1 (TK 1) TERM 3570 3418234 - 3418223 - G 73 -4.4 -4.77438 | overlap 3418209 3418233 ACTGACGATCAAAAA CATC AGTA GATG GCATAGATACTACGC TERM 3571 3418262 - 3418274 + g 73 -4.1 -4.8543 | overlap 3418258 CGCGAACCGCTTTAC CTTGC TCG GTAAG TTTTTCTGCCGCTTC TERM 3572 3419582 - 3419594 + g 82 -7.7 -4.56597 | CGTCTTTGTTGAATT GTGCT GCT AGCAC TTTTTCAGCAAGCGC MADE_03161 3420393 - 3421538 + | methionine adenosyltransferase 1 (AdoMet synthetase) TERM 3573 3421611 - 3421569 - f 95 -14.2 -3.08934 | gap 1, opp_overlap 3421569 GCACATAGTGCAAGA CGCCGCTCGGT-TGACGTT TTCATT ATCGTCGTACCGAGCGGCG TTTTTGTTTTTCTTC TERM 3574 3421569 - 3421611 + F 100 -16.4 -5.74684 | gap 1, opp_overlap 3421569 GCACATAGTGCAAGA CGCCGCTCGGT-TGACGTT TTCATT ATCGTCGTACCGAGCGGCG TTTTTGTTTTTCTTC MADE_03162 3421782 - 3422252 + | hypothetical protein MADE_03163 3422794 - 3422291 - | hypothetical protein MADE_03164 3423213 - 3423088 - | hypothetical protein MADE_03165 3423200 - 3424294 + | Extracellular ligand-binding receptor TERM 3575 3426225 - 3426206 - g 71 -7.2 -4.08767 | TGGACTTCTCTAAAA TTGAAGCC GGTC AGCTTCAA ATAGAAGAGAGCCCG MADE_03166 3424294 - 3427173 + | multi-sensor hybrid histidine kinase MADE_03167 3427258 - 3427464 + | hypothetical protein MADE_03168 3428484 - 3427441 - | permease of the drug/metabolite transporter TERM 3576 3428807 - 3428791 - g 95 -10.9 -4.61566 | GTTTAAACTAGAAAA TTCGTCG TTT CGACGAA GCACGTTAAGCATTG MADE_03169 3428774 - 3431167 + | TonB-dependent receptor TERM 3577 3431218 - 3431183 - T 95 -11.9 -4.258 | TTACGGATGAATAAA CGCTTTGCCTGGAGG TATGCG CCTTCAGGTAAAGCG CTCACCTGAAAGCTA TERM 3578 3431257 - 3431244 - T 76 -4.5 -5.011 | opp_overlap 3431244 AGCTAAATAACAAAA GCGTC AATA AACGC TATCTTGGAAAAGAG TERM 3579 3431462 - 3431439 - T 71 -9.6 -2.78596 | opp_overlap 3431438 3431439 CACTCTGTTACCAGA GGTGCGGT GCGCTCTT ACCGCACC CTTTCACCCTTACCG TERM 3580 3431439 - 3431462 + T 73 -10.3 -2.76261 | opp_overlap 3431439, overlap 3431438 CACTCTGTTACCAGA GGTGCGGTG CGCTCT TACCGCACC CTTTCACCCTTACCG MADE_03170 3433121 - 3431664 - | cell volume regulation protein CvrA TERM 3581 3432658 - 3432668 + g 79 -4 -5.13722 | GAGGCACTTTCTAAT TCTA AGG TAGA TTTTATTTTAGTCGG MADE_03171 3435814 - 3433283 - | Acriflavin resistance protein TERM 3582 3435961 - 3435979 + r 71 -6.6 -4.10855 | AACTCAGGATGGAAG GTGGGCCT CGC GGGCTCGC TTTTACCCACGTTTT MADE_03172 3436321 - 3435944 - | hypothetical protein MADE_03173 3436769 - 3437716 + | hypothetical protein MADE_03174 3437729 - 3438160 + | putative protozoan/cyanobacterial globin family protein TERM 3583 3438265 - 3438248 - T 95 -11.3 -5.14965 | opp_overlap 3438248 ACGTGTATTAAAAAA CCCTCGT ATAA ACGAGGG TTTTGAGCATCTACA TERM 3584 3438248 - 3438265 + T 90 -11.3 -4.13014 | opp_overlap 3438248 ACGTGTATTAAAAAA CCCTCGT ATAA ACGAGGG TTTTGAGCATCTACA MADE_03175 3439014 - 3438292 - | hypothetical protein TERM 3585 3438651 - 3438665 + g 73 -4.3 -4.83169 | CCGCGCCTTGCGCAC CTAAC TTGGC GTTAG TTTTTGTAAAGCAGT MADE_03176 3440339 - 3439242 - | ATPase, AFG1 family protein TERM 3586 3440051 - 3440070 + g 79 -9.4 -4.08767 | opp_overlap 3440046, overlap 3440046 GGTACATAAAGCGGT GAAAATGC ACAC GCATTTTC TTTTCAAACGGTAAG TERM 3587 3440387 - 3440371 - H 72 -10.1 -2.55657 | overlap 3440370 TACAAAAGTCAATAG CGGCGCA CGC TGCACCG ACCTGCTTGAATTTC MADE_03177 3440595 - 3441032 + | hypothetical protein MADE_03178 3441142 - 3442482 + | protease DO TERM 3588 3442536 - 3442518 - f 89 -11.7 -3.76968 | opp_overlap 3442518 AACTTATTGATCAAA CGGCGCT ATTAA AGCGCCG TTTTTATTTTTACCT TERM 3589 3442518 - 3442536 + F 100 -11.7 -5.63236 | opp_overlap 3442518 AACTTATTGATCAAA CGGCGCT ATTAA AGCGCCG TTTTTATTTTTACCT MADE_03179 3442780 - 3443850 + | serine protease DegS TERM 3590 3443892 - 3443869 - T 76 -3.1 -5.18357 | gap 1, opp_overlap 3443869 TAAGGTACGAAAAAA GCGCCTCG TGGGATATT CG-GGCGC TTTTTAGCATTCTTA MADE_03180 3445183 - 3443921 - | UDP-N-acetylglucosamine 1-carboxyvinyltransferase MADE_03181 3445453 - 3445196 - | BolA-like protein MADE_03182 3445791 - 3445483 - | STAS domain protein TERM 3591 3445733 - 3445771 + g 76 -9 -3.65902 | gap 1, opp_overlap 3445725, overlap 3445740 TTAGACAGCGTATCA CGGTCAAGGTGACCGTG AACAAC CACG-TCACCTTTATCG TTTACCTCAAATAGG MADE_03183 3446441 - 3445788 - | toluene tolerance family protein MADE_03184 3447045 - 3446572 - | mce family protein TERM 3592 3446705 - 3446695 - G 75 -3.2 -5.13722 | overlap 3446699 GCCATCAAAAGAAAA CCCA GGC TGGA AACCTACGTACTGCT MADE_03185 3447831 - 3447055 - | putative transport protein (ABC superfamily, membrane) TERM 3593 3447139 - 3447121 - G 71 -9.6 -3.20227 | opp_overlap 3447120 3447123, overlap 3447119 TGCTAATGATGAATA GACTACCG TTT CAGTAGTC GCTTTGCTGATCCCT MADE_03186 3448628 - 3447828 - | putative transport protein (ABC superfamily, atp-binding) TERM 3594 3449325 - 3449307 - g 79 -4.6 -5.1861 | GGCATTAGCAAAAAA CATTGG CATATCT CCAATG ATGATTGGGTTAACG MADE_03187 3449212 - 3450168 + | sodium-calcium exchanger TERM 3595 3450381 - 3450394 + G 79 -2.3 -5.60993 | overlap 3450382 GCCACGCTGGCTAGC ACAGG TACA CCTGC TTTTTTTATGCACCC TERM 3596 3450828 - 3450844 + G 72 -8.7 -3.75461 | opp_overlap 3450828 3450827, overlap 3450815 CTTATCGAGTTAAAC GCATCGG TGG CTGATGC TTTGCTCGAAATTTC MADE_03188 3450171 - 3451151 + | arabinose 5-phosphate isomerase MADE_03189 3451152 - 3451700 + | 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase MADE_03190 3451697 - 3452275 + | hypothetical protein MADE_03191 3452244 - 3452798 + | OstA-like protein MADE_03192 3452801 - 3453526 + | Unclassified ABC-type transport system, ATPase component MADE_03193 3453600 - 3455081 + | RNA polymerase sigma-54 factor TERM 3597 3455269 - 3455259 - g 76 -4.6 -5.05577 | AAATTAAATCAAAAA GCCG AAG CGAC CGTTCATTTAAGTGG MADE_03194 3455112 - 3455399 + | ribosomal subunit interface protein TERM 3598 3455437 - 3455463 + G 87 -14.5 -2.82516 | overlap 3455442 CAAGCCATCGTAAGT CTGGACCGCAC CGAGT GTGCGGTTCAG TGTAATAGTAAAAAG TERM 3599 3455530 - 3455520 - g 72 -5.4 -4.40561 | CGCTGCCAAAAATAA CGAT AAC ATCG ATCAGGCAACGGTAC MADE_03195 3455413 - 3455856 + | nitrogen regulatory IIA protein TERM 3600 3455897 - 3455861 - f 76 -11 -2.68034 | overlap 3455860 3455858 CACTAAGTTAAAGAT TTAAGCGCCTTAGCGA GGTCG TGACCAAGGCGCTTAA GACAATAAAGCGTAT MADE_03196 3455945 - 3456790 + | hypothetical protein MADE_03197 3456790 - 3457062 + | phosphocarrier protein NPR TERM 3601 3458535 - 3458551 + G 74 -7.3 -4.20696 | TATCTTAACCACTAT TACCGAT GTA GTCGGTA TTTTCGCCTTCCTAG MADE_03198 3457234 - 3458592 + | Mg/Co/Ni transporter MgtE (contains CBS domain) TERM 3602 3458948 - 3458961 + T 81 -6.7 -4.68593 | ATTTAATAACTTTAA GGGTA GGCT TACCC TTTTTAGGTGGTACA MADE_03199 3459395 - 3458931 - | stringent starvation protein B TERM 3603 3459381 - 3459364 - G 82 -7 -4.88067 | opp_overlap 3459364 ATCCACTCATAAAAA GCCCTA AGCAAA TAGGGC TGGTTTGACGTCATA MADE_03200 3460033 - 3459401 - | stringent starvation protein A TERM 3604 3460151 - 3460177 + r 76 -10.9 -2.54919 | opp_overlap 3460156, overlap 3460156 CACGAGTAAATACCA AAAAAGGGGGC GAGAA GCCCCCTTTTC ATATTATACATAAAT TERM 3605 3460156 - 3460172 + r 91 -10.8 -4.46656 | opp_overlap 3460156, overlap 3460151 GTAAATACCAAAAAA GGGGGC GAGAA GCCCCC TTTTCATATTATACA TERM 3606 3460172 - 3460156 - R 100 -10.8 -5.32699 | opp_overlap 3460156 3460151 GTAAATACCAAAAAA GGGGGC GAGAA GCCCCC TTTTCATATTATACA MADE_03201 3460524 - 3460201 - | putative ubiquinol--cytochrome c reductase, cytochrome c1 MADE_03202 3460530 - 3461408 + | phage integrase MADE_03203 3461426 - 3462409 + | Sugar kinase, ribokinase family protein TERM 3607 3463348 - 3463338 - g 72 -3.2 -4.91511 | overlap 3463324 AGTTGACCACAAAAA GCTG GAA CAAC TATTCGTAGACACCT MADE_03204 3462433 - 3463374 + | Inosine-uridine nucleoside N-ribohydrolase TERM 3608 3463384 - 3463405 + F 90 -8.8 -4.98531 | CTATGATATGTTTAA GGGATTGT TAATAT ACAATCCC TTTTTAATTTCAGCG MADE_03205 3463436 - 3465064 + | histidine kinase response regulator hybrid protein MADE_03206 3465098 - 3465787 + | 5-formyltetrahydrofolate cyclo-ligase MADE_03207 3465868 - 3466530 + | ribose-5-phosphate isomerase A MADE_03208 3466758 - 3468005 + | D-3-phosphoglycerate dehydrogenase TERM 3609 3468081 - 3468063 - T 100 -13.2 -5.95539 | opp_overlap 3468063 GCTTAAATAAAAAAA CGCTGCAT ATA ATGCAGCG TTTTTTTTAGATTAA TERM 3610 3468063 - 3468081 + T 100 -13.2 -5.86332 | opp_overlap 3468063 GCTTAAATAAAAAAA CGCTGCAT ATA ATGCAGCG TTTTTTTTAGATTAA MADE_03209 3468897 - 3468151 - | putative orphan protein TERM 3611 3468878 - 3468889 + g 73 -4.4 -4.8622 | opp_overlap 3468866 3468878 ATGGCAACTAAAGAT GCAA GCAC TTGC TTTTTCATTGAACAA MADE_03210 3468944 - 3469075 + | hypothetical protein TERM 3612 3469132 - 3469121 - T 80 -2.2 -5.54894 | AATTGACTAAAAAAA CTGG TACA CCAA AGCAACTGATGTTTC MADE_03211 3469915 - 3469112 - | putative salt-induced outer membrane protein MADE_03212 3470230 - 3470051 - | hypothetical protein MADE_03213 3470672 - 3470187 - | hypothetical protein TERM 3613 3470500 - 3470481 - GH 73 -4.2 -4.77438 | opp_overlap 3470482 3470483, overlap 3470482 3470483 ACCCATGACGAAAAA GCGTTCGG CTCC CCGAACAT TTAGCCGCATTGCAA TERM 3614 3470602 - 3470624 + gH 76 -10.6 -2.59431 | opp_overlap 3470600 3470599, overlap 3470599 AAGTGCTTGAAAGCG GTTGTGGCTG TCT CAGCGACAAC TAGGTTATAAAGGGC TERM 3615 3470716 - 3470700 - H 79 -9.5 -3.76125 | GGATGGGAAGCGAAA TAGCGAA CTG TTCGCTA AACGTAAAACTTTAG MADE_03214 3470767 - 3470880 + | hypothetical protein MADE_03215 3471163 - 3470897 - | Fe-S protein-like proteinEB3 MADE_03216 3472140 - 3471397 - | hypothetical protein TERM 3616 3471745 - 3471766 + g 76 -8 -4.23892 | AGTAACAGTTTGAAT GGCGCTAT AGCGAA ATGGCGCC TTTTCACTGCTTCCA TERM 3617 3472241 - 3472222 - R 100 -13.6 -5.75342 | TGGTGGCAAAAAAAA GGCCACTC AAAT GAGTGGCC TAAAGAGCCCCTTAA MADE_03217 3475407 - 3472285 - | RND multidrug efflux transporter MexF MADE_03218 3476693 - 3475407 - | Membrane-fusion protein TERM 3618 3476837 - 3476825 - g 82 -5.5 -5.15969 | opp_overlap 3476825, overlap 3476806 TGCGAATTGAAAAAA CGCCT CAA AAGCG TTAATGAAGTGATAA MADE_03219 3476816 - 3476992 + | hypothetical protein MADE_03220 3477157 - 3478200 + | Transcriptional regulator MADE_03221 3478364 - 3478197 - | dihydrolipoamide dehydrogenase MADE_03222 3478635 - 3478438 - | hypothetical protein TERM 3619 3478715 - 3478732 + r 90 -12.7 -3.64192 | opp_overlap 3478715, overlap 3478706 GCATAGTACAAAAAA GCCCGCT TAGA AGCGGGC TTTCAAAGTATTTTT TERM 3620 3478732 - 3478715 - R 100 -12.7 -5.34555 | opp_overlap 3478715 3478706 GCATAGTACAAAAAA GCCCGCT TAGA AGCGGGC TTTCAAAGTATTTTT MADE_03223 3480182 - 3478761 - | dihydrolipoamide dehydrogenase MADE_03224 3482354 - 3480315 - | pyruvate dehydrogenase complex, E2 component, dihydrolipoamide acetyltransferase TERM 3621 3481645 - 3481662 + g 79 -7.7 -4.37711 | CTACTTGCAGACGCC GCAGGAG CTGA CTCTTGC TTTTCGCTTTCCTGC TERM 3622 3481983 - 3482017 + g 72 -4.9 -4.58585 | gap 1, overlap 3481986 TTCAATCACTTCACT GC-CGCCAGACGCAGC TGGT GCTGCCTCTGACTTGC TTTCTTCTTTCGGTG TERM 3623 3481986 - 3482013 + g 79 -9.8 -3.78475 | overlap 3481983 AATCACTTCACTGCC GCCAGACGCAGC TGGT GCTGCCTCTGAC TTGCTTTCTTCTTTC MADE_03225 3485051 - 3482376 - | pyruvate dehydrogenase complex, E1 component, pyruvate dehydrogenase TERM 3624 3482643 - 3482655 + g 72 -9.1 -3.50722 | opp_overlap 3482642 3482643, overlap 3482641 GTCAGTGGCAGAAAT CGCAG GGC CTGCG TCTTTCGTAATTACC MADE_03226 3486007 - 3485261 - | transcriptional regulator of pyruvate dehydrogenase complex TERM 3625 3486316 - 3486278 - R 76 -9.1 -3.65902 | opp_overlap 3486270 GTGATGCGATGCAAA GCATTTGATCTACTTAC AGTTA ATAAATAGACCAAACGC TCACGAAGTCGTAAA MADE_03227 3487216 - 3486347 - | putative ampicillin resistance protein TERM 3626 3486738 - 3486724 - G 80 -5.6 -5.02074 | TTATGCTGTAAAAAA GTGCCC CTG GTGCAC CAAACGCGATAAACC MADE_03228 3487783 - 3487247 - | AmpD TERM 3627 3487490 - 3487455 - G 70 -9.8 -3.05844 | opp_overlap 3487466, overlap 3487459 3487460 3487466 CCTTCTAGCTCAATA CCAATGGAAAAGTCGT TGCA ACGGCTTTTCCCTTGA AACGACGACAGCCCG TERM 3628 3487485 - 3487460 - G 71 -10.5 -2.62026 | opp_overlap 3487466, overlap 3487459 3487455 3487466 TAGCTCAATACCAAT GGAAAAGTCGT TGCA ACGGCTTTTCC CTTGAAACGACGACA TERM 3629 3487496 - 3487466 - G 79 -8.3 -4.31688 | opp_overlap 3487466, overlap 3487460 3487459 3487455 AATACCAATGGAAAA GTCGTTGCAACGG CTTTT CCCTTGAAACGAC GACAGCCCGGCATGC TERM 3630 3488129 - 3488086 - g 70 -8.8 -3.46336 | overlap 3488084 AGGTTAACCCAAATA GCGAACCTAGGTCTGAACGC ATTG GCTCTCAAACCGAAGTGCGC TTAAAGCAGAATCGT MADE_03229 3487959 - 3488477 + | predicted aspartyl protease MADE_03230 3488491 - 3489351 + | Nicotinate-nucleotide pyrophosphorylase MADE_03231 3489887 - 3490312 + | type IV pilin TERM 3631 3490328 - 3490355 + F 100 -17.2 -5.28942 | opp_overlap 3490319 3490334, overlap 3490334 TCTAAACGAGTTGAA CAAAAACCCGAC TAAC GTCGGGTTTTTG TTTTTATTTCCCCTC TERM 3632 3490334 - 3490349 + F 100 -10.4 -5.77734 | opp_overlap 3490319 3490334, overlap 3490328 CGAGTTGAACAAAAA CCCGAC TAAC GTCGGG TTTTTGTTTTTATTT TERM 3633 3490349 - 3490334 - f 93 -10.4 -5.08601 | opp_overlap 3490334 3490328, overlap 3490319 CGAGTTGAACAAAAA CCCGAC TAAC GTCGGG TTTTTGTTTTTATTT MADE_03232 3490400 - 3491608 + | type IV pilus biogenesis protein PilC TERM 3634 3492554 - 3492572 + G 72 -5.2 -4.59773 | overlap 3492544 CCTTACCTTGCTGTA GCAGGGTG GCT TACGCTGC TTTTTAAAGCTGAAA MADE_03233 3491726 - 3492619 + | Type 4 prepilin-like proteins leader peptide processing enzyme MADE_03234 3492635 - 3493030 + | dephospho-CoA kinase MADE_03235 3493416 - 3494168 + | hypothetical protein MADE_03236 3494259 - 3494486 + | zinc-binding protein TERM 3635 3495156 - 3495111 - g 79 -7.8 -4.4261 | gap 2 GGTGGAAGACGAAAA GCCTTATCTTGACCATGGTTAC TTGT GTA-CCACGGGCAAAA-AAGGC GTGATGATAGAAGTG MADE_03237 3494680 - 3495552 + | aspartoacylase TERM 3636 3495683 - 3495657 - T 100 -15.3 -3.54741 | opp_overlap 3495657 TATTAGGTTTTGAAA TTGCCAGTCAG TGGAG CTGACTGGCAA TTTGACAGTAGTGAA TERM 3637 3495657 - 3495683 + T 100 -16 -3.58343 | opp_overlap 3495657 TATTAGGTTTTGAAA TTGCCAGTCAGT GGA GCTGACTGGCAA TTTGACAGTAGTGAA MADE_03238 3497072 - 3495783 - | chemotaxis sensory transducer TERM 3638 3495977 - 3495966 - G 76 -4.4 -4.91987 | overlap 3495968 AATGTAAGAAGAAAA CTGT CCAA ACAG ACTAACAATGGCATC TERM 3639 3496209 - 3496222 + g 72 -3.1 -5.03314 | overlap 3496192 CGTGTCATTTGCTCG TGTTG AGTT CAGCA TTTTTTCGCCCTGCA MADE_03239 3497450 - 3497082 - | Response regulator receiver domain protein (CheY) MADE_03240 3498202 - 3497468 - | Cobyrinic acid a,c-diamide synthase TERM 3640 3498145 - 3498156 + g 74 -5.8 -4.62069 | CATAGGCAAGATTTA CGAC CGTC GTCG TTTTTGCAGTACCGC MADE_03241 3498453 - 3498199 - | hypothetical protein MADE_03242 3501185 - 3498444 - | chemotaxis protein CheA MADE_03243 3501555 - 3501178 - | chemotaxis protein CheY MADE_03244 3502411 - 3501557 - | chemotaxis protein methyltransferase CheR MADE_03245 3503045 - 3502404 - | PBS lyase HEAT-like repeat MADE_03246 3504097 - 3503060 - | Two component CheB methylesterase TERM 3641 3503822 - 3503798 - G 79 -8.5 -4.30987 | overlap 3503800 AGTTTTTAGAACAAA GTCACTAGCAC CGA GCGCCAGTGCC TCTAACGTAATAGTC MADE_03247 3505664 - 3504117 - | CheW protein TERM 3642 3504458 - 3504472 + g 89 -11.4 -4.06179 | CTTTGAGATAATCTG GCGTGC TCG GCACGC TTTCTAGCTTTTCGG MADE_03248 3507608 - 3505701 - | chemotaxis sensory transducer TERM 3643 3507872 - 3507884 + r 70 -2.7 -5.03314 | GTCTAATAGGGTTAA CTTTA GGG TGAAG TTTTTTGGAGATAAA TERM 3644 3507942 - 3507956 + r 90 -11.4 -3.97088 | opp_overlap 3507942 AAGTATAGGAAAAAA GCGGCT ATT AGCCGC TTTGATATTATAACG TERM 3645 3507956 - 3507942 - R 100 -11.4 -5.2422 | opp_overlap 3507942 AAGTATAGGAAAAAA GCGGCT ATT AGCCGC TTTGATATTATAACG MADE_03249 3508423 - 3508040 - | mutator mutT protein MADE_03250 3511131 - 3508423 - | translocase TERM 3646 3510953 - 3510963 + g 70 -2.4 -4.96848 | ACAAGAATATTGTCT AGCG CTT CGCC TTTTTCTATACGGGC MADE_03251 3512191 - 3511313 - | peptidase, M23/M37 family protein TERM 3647 3512126 - 3512155 + g 78 -5.8 -4.85782 | gap 1, opp_overlap 3512125 3512126, overlap 3512125 GGTAGCACTAACAAG CG-TACGGACACG AATGC TGTGTCTGTAACG TTTATTTTTACCAGC TERM 3648 3512357 - 3512341 - R 100 -11.5 -5.58454 | opp_overlap 3512341 GCCATACGAAAAAAA GCCGCCC GTA AGGCGGC TTTTTAAAAATCTTA TERM 3649 3512341 - 3512357 + r 91 -10.8 -4.62302 | opp_overlap 3512341 GCCATACGAAAAAAA GCCGCC CGTAA GGCGGC TTTTTAAAAATCTTA MADE_03252 3513170 - 3512370 - | UDP-3-O-acyl-N-acetylglucosamine deacetylase TERM 3650 3512459 - 3512471 + g 70 -4.8 -4.44667 | opp_overlap 3512459 CTTTTTGCGCTAACA CTGC ATTAA GCAG TTTGTTATTCAGGCC MADE_03253 3514012 - 3513404 - | cell division protein FtsZ MADE_03254 3515618 - 3514200 - | cell division protein FtsA TERM 3651 3514818 - 3514796 - G 70 -4.8 -4.4017 | overlap 3514799 CCAACGCTGAGAAAA TCAGCTGATC GGC GTTCAGCTCA CAGCGCTCTACACAT MADE_03255 3516127 - 3515606 - | cell division protein MADE_03256 3517098 - 3516130 - | D-alanine-D-alanine ligase B MADE_03257 3518545 - 3517100 - | UDP-N-acetylmuramate--alanine ligase TERM 3652 3517317 - 3517290 - G 73 -10.7 -3.02144 | gap 1, overlap 3517264 3517292 CCACGCTGGCGAATA GAGCGGCATAGC GATTT GCTAT-CCGCTC CCTCAATAGGCTGCT TERM 3653 3517394 - 3517384 - G 72 -5.4 -4.42619 | overlap 3517386 CAACACTTGATAAAA CTTC CAC GAAG TCCTCATAGAGATCT MADE_03258 3519639 - 3518545 - | UDP-N-acetylglucosamine:N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine TERM 3654 3518705 - 3518749 + g 86 -2.7 -5.68438 | opp_overlap 3518702 3518715, overlap 3518706 TGTTTCAATACAGAT TGTGCAATCATTAGCGCTGCA TTT TGCTTCACTAACGACTGCGCG TTTTTTGTTTGATGA MADE_03259 3521044 - 3519632 - | cell division protein FtsW TERM 3655 3520557 - 3520570 + g 75 -6.7 -4.43272 | AAGAACACCACCAGC GGCTT TAAA AAGCC TTTTAGGTTTTCCGT TERM 3656 3520651 - 3520637 - G 79 -2.8 -5.39681 | ATAAGCAAAGAAAAA GAGC TTGGCTG GCTC AGCGGCTTGAATAGT MADE_03260 3522480 - 3521041 - | UDP-N-acetylmuramoylalanine--D-glutamate ligase MADE_03261 3523584 - 3522502 - | phospho-N-acetylmuramoyl-pentapeptide- transferase TERM 3657 3522588 - 3522552 - G 72 -6.6 -4.20797 | gap 1, opp_overlap 3522562 3522563, overlap 3522562 3522563 CCAAAATGATAGAAA TGATCCAAAAGCGCACG ATAA CGCGCGGTTCTGG-CCA GCCCTTTAATTCATA MADE_03262 3524987 - 3523578 - | D-alanine:D-alanine-adding enzyme MADE_03263 3526534 - 3524987 - | UDP-N-acetylmuramoylalanyl-D-glutamate--2,6- diaminopimelate ligase TERM 3658 3526441 - 3526413 - G 74 -3.8 -5.055 | overlap 3526415 3526418 TTAATGGCTAAAAAA GCTAACCGCG TGTTCACTT CGCGGCTATC TAAAGTAAGGCCTTC MADE_03264 3528296 - 3526539 - | peptidoglycan synthetase FtsI TERM 3659 3526936 - 3526960 + g 73 -4.3 -4.83169 | overlap 3526937 CAAGACGGTTGTTCC GGCGACTTAAT AAT ATTAAGTGGCG TTTTTATACCGCCGT TERM 3660 3528072 - 3528097 + g 82 -11.1 -3.65224 | opp_overlap 3528071 3528072, overlap 3528092 TCTATCGGTAATAAG CCCGCGATAGG TCGG CATGTCGCGGG TTCTTAGCGTGCGGT MADE_03265 3528628 - 3528293 - | cell division protein FtsL TERM 3661 3528558 - 3528541 - G 100 -11.3 -4.95302 | opp_overlap 3528541 TTAAATACAACAAAA CCCGCAA CTTG TTGCGGG TTAAATCTGAAACAA TERM 3662 3528541 - 3528558 + g 77 -11.3 -3.12351 | opp_overlap 3528541 TTAAATACAACAAAA CCCGCAA CTTG TTGCGGG TTAAATCTGAAACAA MADE_03266 3529566 - 3528625 - | S-adenosyl-methyltransferase MADE_03267 3529889 - 3529563 - | MraZ protein TERM 3663 3530402 - 3530375 - R 100 -10 -5.59564 | opp_overlap 3530375 ATAAATGCAAAAAAA TGAACTACCAAC CGAA GCTGATAGTTCA TTGTTAATTATTGCT MADE_03268 3531271 - 3530447 - | hypothetical protein TERM 3664 3531414 - 3531399 - R 100 -6.8 -5.9667 | opp_overlap 3531399 AAAAACATAAAAAAA CCCGCT GTTA AGCAGG TTTTTAAACTTCAGA TERM 3665 3531399 - 3531414 + r 72 -4.6 -4.66833 | opp_overlap 3531399 AAAAACATAAAAAAA CCCGCT GTTA AGCAGG TTTTTAAACTTCAGA MADE_03269 3532212 - 3531442 - | SapC TERM 3666 3533845 - 3533877 + r 77 -6.3 -4.59993 | opp_overlap 3533846 3533851, overlap 3533846 3533847 3533851 ATAAATAGCAATTTA ACCAAAGGGAAGC CATAAGC GCTTCCCTTTGCA TTTATTTATCACTTT TERM 3667 3533846 - 3533876 + r 75 -9.8 -3.34369 | opp_overlap 3533846 3533851, overlap 3533845 3533847 3533851 TAAATAGCAATTTAA CCAAAGGGAAGC CATAAGC GCTTCCCTTTGC ATTTATTTATCACTT TERM 3668 3533876 - 3533846 - R 73 -9.8 -3.2505 | opp_overlap 3533845 3533846 3533847 3533851, overlap 3533851 TAAATAGCAATTTAA CCAAAGGGAAGC CATAAGC GCTTCCCTTTGC ATTTATTTATCACTT TERM 3669 3533847 - 3533875 + r 90 -13.3 -2.59537 | opp_overlap 3533846 3533851, overlap 3533846 3533845 3533851 AAATAGCAATTTAAC CAAAGGGAAGC CATAAGC GCTTCCCTTTG CATTTATTTATCACT TERM 3670 3533851 - 3533871 + r 79 -8.3 -3.97446 | opp_overlap 3533846 3533851, overlap 3533847 3533846 3533845 AGCAATTTAACCAAA GGGAAGC CATAAGC GCTTCCC TTTGCATTTATTTAT TERM 3671 3533871 - 3533851 - R 77 -8.3 -3.96387 | opp_overlap 3533851 3533847 3533846 3533845, overlap 3533846 AGCAATTTAACCAAA GGGAAGC CATAAGC GCTTCCC TTTGCATTTATTTAT MADE_03272 3536834 - 3533886 - | cation efflux system protein CusA TERM 3672 3533954 - 3533939 - G 72 -5.4 -4.43012 | ATGGTAATACCAAAA GCGTTA ACAC CAACGC ACTTGCCATACCGCC TERM 3673 3535071 - 3535081 + g 81 -8.2 -4.4773 | CCCGGCGATTTTAAT CCCC ACC GGGG TTTTAATTCCTGTCG MADE_03273 3537141 - 3536872 - | Co/Zn/Cd efflux system membrane component MADE_03274 3537250 - 3537146 - | hypothetical protein TERM 3674 3537227 - 3537249 + g 79 -9.9 -3.75665 | overlap 3537238 GTTATGGCCGCTTGT TGCGTCATG CTCAC CGTGACGCA TTTCATGGGGTATGG MADE_03275 3537620 - 3537267 - | putative cation efflux protein MADE_03276 3538255 - 3537902 - | hypothetical protein MADE_03277 3538445 - 3538290 - | hypothetical protein MADE_03278 3539583 - 3538543 - | phospholipase/Carboxylesterase TERM 3675 3539614 - 3539637 + r 100 -12.5 -4.8543 | opp_overlap 3539614 AATTTCAATAAAAAA CGGGAGCAT ATTAAC ATGCTCCCG TTTTTGTGACGATTA TERM 3676 3539637 - 3539614 - R 100 -13.2 -5.4756 | opp_overlap 3539614 AATTTCAATAAAAAA CGGGAGCATA TTAA CATGCTCCCG TTTTTGTGACGATTA MADE_03279 3540407 - 3539667 - | putative peroxiredoxin/glutaredoxin family protein TERM 3677 3540859 - 3540849 - gH 75 -5.4 -4.67011 | opp_overlap 3540849 AACTTTATGGAAAAA TTCG CAA CGAA TTACTAAGTCTGCGT MADE_03280 3540644 - 3541339 + | parA family protein TERM 3678 3541522 - 3541482 - gf 73 -10 -2.83903 | gap 2, opp_overlap 3541494, overlap 3541488 3541494 CCGCTTAAAAAGCCA GACAAAGTACAAGGTATGCG TCA CGC-TACCTT-TACTTTGAC ACCACAATGTATTGA MADE_03281 3541293 - 3541628 + | RepA domain protein TERM 3679 3542502 - 3542485 - g 71 -6.9 -4.18018 | overlap 3542460 CCCTTTTACTTAAAA CTGGCGC CAGT GCGCAAG CAACAGTTGCCATCA TERM 3680 3542801 - 3542785 - g 70 -5 -4.43477 | TCGACGCAAGGAAAA GCCGGG ATTTA CGCGGC CAGCTCAGCTTTTTA TERM 3681 3543354 - 3543332 - g 79 -11.4 -3.37796 | opp_overlap 3543329 3543332, overlap 3543316 CCCTACTACCGATAA GGCAAAGCAA GAT TTACTTTGCC TCCTTATAGACATTG MADE_03282 3541752 - 3543890 + | hypothetical FOG: GGDEF domain protein MADE_03283 3543903 - 3544220 + | ADP-ribosylglycohydrolase family protein TERM 3682 3544214 - 3544235 + T 77 -5.2 -4.91852 | overlap 3544216 TCACTGCCAATTTGT TATCTAGC GACAAG GCTAGATG TTTGTTTTTAGTACC TERM 3683 3544236 - 3544284 + T 76 -8.9 -3.73914 | opp_overlap 3544280, overlap 3544237 3544277 3544278 3544280 CGACAAGGCTAGATG TTTGTTTTTAGTACCGGTGGAAG CTC CTCTCACCGGTACTACAAGCGGC TTGTTAGTCGCTGCT TERM 3684 3544237 - 3544283 + T 83 -12.4 -2.83867 | opp_overlap 3544280, overlap 3544236 3544277 3544278 3544280 GACAAGGCTAGATGT TTGTTTTTAGTACCGGTGGAAG CTC CTCTCACCGGTACTACAAGCGG CTTGTTAGTCGCTGC MADE_03284 3545649 - 3544288 - | sigma-54 dependent DNA-binding response regulator, Fis family protein TERM 3685 3544947 - 3544933 - G 80 -7.1 -4.57341 | opp_overlap 3544940 AATTTCGTCTAAAAA CAGGG TGCCG CCCTG CGCTGTTTCTATTTT MADE_03285 3547759 - 3545732 - | sensor histidine kinase TERM 3686 3547666 - 3547682 + g 79 -10.1 -3.74872 | opp_overlap 3547665 3547666 CCAGCACCAAAAGAT GCTTGGC CAC GCCAGGC TTTCGTACCGTAAAT MADE_03286 3549004 - 3547874 - | 3-oxoacyl-(acyl carrier protein) synthase MADE_03287 3549876 - 3550037 + | putative TonB-dependent receptor TERM 3687 3550074 - 3550054 - T 71 -6.7 -4.13814 | opp_overlap 3550054 3550055, overlap 3550055 AAAACGTACAAACAA TGCCTCGGC AAT GCTGAGGCG TTTGTGAAAAGCCAA TERM 3688 3550054 - 3550074 + T 86 -11.1 -3.85698 | opp_overlap 3550054 3550055, overlap 3550055 AAAACGTACAAACAA TGCCTCGGC AAT GCTGAGGCG TTTGTGAAAAGCCAA TERM 3689 3550073 - 3550055 - T 75 -10.2 -3.06662 | opp_overlap 3550054 3550055, overlap 3550054 AAACGTACAAACAAT GCCTCGGC AAT GCTGAGGC GTTTGTGAAAAGCCA TERM 3690 3550055 - 3550073 + T 83 -12.4 -2.91276 | opp_overlap 3550055 3550054, overlap 3550054 AAACGTACAAACAAT GCCTCGGC AAT GCTGAGGC GTTTGTGAAAAGCCA TERM 3691 3550122 - 3550090 - T 85 -11.6 -3.36823 | gap 1, opp_overlap 3550090 3550092 3550097, overlap 3550097 TTTGTGAAAAGCCAA TAA-AAAACCCGCTT CATG AAGCGGGTTTTCTTA TCTCGTTTAAGCGAC TERM 3692 3550090 - 3550122 + T 81 -11.6 -3.00525 | gap 1, opp_overlap 3550090 3550097, overlap 3550092 3550097 TTTGTGAAAAGCCAA TAA-AAAACCCGCTT CATG AAGCGGGTTTTCTTA TCTCGTTTAAGCGAC TERM 3693 3550092 - 3550119 + T 88 -11.4 -3.6471 | opp_overlap 3550090 3550097, overlap 3550090 3550097 TGTGAAAAGCCAATA AAAAACCCGCTT CATG AAGCGGGTTTTC TTATCTCGTTTAAGC TERM 3694 3550097 - 3550114 + T 95 -11.3 -4.86822 | opp_overlap 3550090 3550097, overlap 3550092 3550090 AAAGCCAATAAAAAA CCCGCTT CATG AAGCGGG TTTTCTTATCTCGTT TERM 3695 3550114 - 3550097 - T 100 -11.3 -5.52096 | opp_overlap 3550097 3550092 3550090, overlap 3550090 AAAGCCAATAAAAAA CCCGCTT CATG AAGCGGG TTTTCTTATCTCGTT MADE_03288 3551943 - 3550141 - | putative alkaline phosphatase TERM 3696 3550514 - 3550498 - G 72 -8.7 -3.73953 | ATCACCGTTATTAAA CTGCGCA CCA TGCACAG AAGCCGTAATACGCT TERM 3697 3551490 - 3551474 - G 75 -11.5 -3.02144 | TTATCTGTTTTAACA GCGGCGG GTA CCGCCAC CGCCATAAGGTCACC MADE_03289 3552425 - 3553192 + | Zn-dependent protease with chaperone function TERM 3698 3553208 - 3553230 + T 73 -5.7 -4.56597 | gap 1 GTTGAATACACTTAC GCGATATTGA CTCT TCAAT-TCGC TTTTTACACGCAAAA TERM 3699 3553267 - 3553250 - T 100 -8.4 -5.83822 | opp_overlap 3553250 3553266 TACACGCAAAAAAAA CGCTGC AAATTA GCAGCG TTTTTTTCGTGATAG TERM 3700 3553250 - 3553267 + T 100 -8.4 -5.55664 | opp_overlap 3553250, overlap 3553266 TACACGCAAAAAAAA CGCTGC AAATTA GCAGCG TTTTTTTCGTGATAG MADE_03290 3554135 - 3553293 - | MscS Mechanosensitive ion channel TERM 3701 3554675 - 3554663 - H 77 -6.3 -4.62475 | ACTGATAAAGGAAAA CATAC CAA GTATG CAAGAGCGGACTACC TERM 3702 3554813 - 3554800 - H 70 -8.1 -3.67188 | opp_overlap 3554800 3554799 AGTGATTCTAAAATA GGCAG CGTG CTGCC GTTTATGTAAATTCT TERM 3703 3555441 - 3555420 - g 70 -10.1 -2.94806 | overlap 3555415 TCAACCAATACCACA CGACTGGTG CTTG CACCAGGCG CTGAACAGCCGCTAG MADE_03291 3554919 - 3555647 + | hypothetical protein MADE_03292 3555828 - 3556817 + | glutathione synthetase MADE_03293 3556869 - 3557495 + | Transcription regulator MADE_03294 3557488 - 3557919 + | Holliday junction resolvase-like protein MADE_03295 3558335 - 3558009 - | uncharacterized conserved protein containing predicted Zn-ribbon like domain MADE_03296 3559473 - 3558361 - | twitching motility protein PilU (type IV pili) TERM 3704 3558952 - 3558967 + g 88 -7.6 -4.93898 | AATACCCACCTCACG CTGTGT AATC ACACAG TTTTTATGCTCGTGT TERM 3705 3559437 - 3559448 + g 76 -4.4 -5.06451 | overlap 3559435 ATAAATCTGACGCGT TGGT ATCA ACCA TTTTTTGAAGTAGTG MADE_03297 3560531 - 3559482 - | twitching motility protein PilT MADE_03298 3560643 - 3561251 + | alanine racemase domain protein MADE_03299 3561303 - 3562124 + | pyrroline-5-carboxylate reductase MADE_03300 3562145 - 3562681 + | hypothetical protein MADE_03301 3562685 - 3563206 + | hypothetical protein TERM 3706 3563307 - 3563335 + F 100 -10.3 -5.64304 | opp_overlap 3563300 3563307 AACTAAAATAGATAA GCGAGATAACCGT TAA ATGGGTGTCTCGC TTTTTTATTATGTTA MADE_03302 3563323 - 3563490 + | hypothetical protein TERM 3707 3565114 - 3565104 - g 72 -3.2 -4.99056 | CAAGACAAGGAAAAA TGGC TGG ACCA TTGGGGAATCGATAA MADE_03303 3563493 - 3565535 + | 2,4-dienoyl-CoA reductase MADE_03304 3565867 - 3565532 - | Glyoxalase/bleomycin resistance protein/dioxygenase TERM 3708 3565964 - 3565988 + r 80 -10.1 -3.71687 | opp_overlap 3565964, overlap 3565956 CGCAAAAACTAAAAA GCCAGTAAG GTCTATA CTTACTGGC TTTAAGATGTTTTAA TERM 3709 3565988 - 3565964 - R 100 -10.1 -5.18355 | opp_overlap 3565956 3565964 CGCAAAAACTAAAAA GCCAGTAAG GTCTATA CTTACTGGC TTTAAGATGTTTTAA MADE_03305 3567861 - 3566026 - | hypothetical protein TERM 3710 3567116 - 3567129 + g 76 -5.2 -4.77036 | opp_overlap 3567126, overlap 3567128 GCTTTCTCGTAGTCA GCGC TCAAAC GCGC TTTTTCCTCGTCGGA MADE_03306 3568571 - 3567939 - | putative glutathione S-transferase protein TERM 3711 3568743 - 3568753 + H 71 -6.8 -4.00124 | opp_overlap 3568743 ACTTTTTCATACACA GGGT ATA ACCC TTTCATTATGCGCTG MADE_03307 3568927 - 3569472 + | superoxide dismutase, Cu-Zn TERM 3712 3569563 - 3569519 - T 83 -12.3 -2.74799 | opp_overlap 3569524, overlap 3569509 3569524 CAGAAGCGTTTAAAC TAAAAGCCCCCGGTAATCAAA CAT CTCAATTACTGGGGGCTTTTT ACATCTAAATTTTTA TERM 3713 3569524 - 3569558 + T 93 -9.4 -4.71061 | opp_overlap 3569509 3569519 3569524 GCGTTTAAACTAAAA GCCCCCGGTAAT CAAACATCTCA ATTACTGGGGGC TTTTTACATCTAAAT TERM 3714 3569558 - 3569524 - T 95 -12.2 -4.54727 | opp_overlap 3569524, overlap 3569509 3569519 GCGTTTAAACTAAAA GCCCCCGGTAATCAAA CAT CTCAATTACTGGGGGC TTTTTACATCTAAAT TERM 3715 3569614 - 3569595 - T 88 -9.3 -4.62441 | opp_overlap 3569595 GCGGATATAAATAAA GCTCGCT AACAGA AGCGAGC TTTTTAAAATGTGTT TERM 3716 3569595 - 3569614 + T 89 -9.3 -4.6644 | opp_overlap 3569595 GCGGATATAAATAAA GCTCGCT AACAGA AGCGAGC TTTTTAAAATGTGTT MADE_03308 3570125 - 3569691 - | osmotically inducible protein TERM 3717 3570159 - 3570169 + H 71 -6.8 -4.08767 | TACTTAATTAAATCT GAGC CAA GCTC TTTTAGAGACCTGAA MADE_03309 3570558 - 3570893 + | Peptide methionine sulfoxide reductase msrA 2 MADE_03310 3571004 - 3571516 + | hypothetical protein MADE_03311 3571903 - 3571556 - | hypothetical protein TERM 3718 3571607 - 3571597 - G 84 -8.2 -4.63928 | overlap 3571588 ATATTACGCCAAAAA CGGC GAC GCCG AAGAATACAGGCAGG MADE_03312 3572615 - 3571893 - | putative amino acid transporter MADE_03313 3573139 - 3572612 - | transcriptional regulator, Cro/CI family protein TERM 3719 3572663 - 3572673 + g 72 -5.4 -4.38712 | AAGGCACGTTACCCA CTCA TCT TGAG TTTTGTAGACGTGAG TERM 3720 3573157 - 3573192 + H 79 -10 -3.59979 | opp_overlap 3573174 GGCGCCAACTTATAT TTGTTCTATTTATGGA ATGT TCTATATATAGAACAA TTTAAAGTCAAGAAG TERM 3721 3573598 - 3573566 - g 74 -10.7 -3.24232 | opp_overlap 3573571, overlap 3573552 3573571 TGGCTTTCAAACATA GAAAACCGGCAAACA TAC CATTTGCCGGTTTTT GTATTTTAATCTTGT TERM 3722 3573571 - 3573593 + G 100 -9.2 -5.30339 | opp_overlap 3573552 3573566 3573571 TTCAAACATAGAAAA CCGGCAAA CATACCA TTTGCCGG TTTTTGTATTTTAAT TERM 3723 3573593 - 3573571 - g 100 -10.6 -4.74013 | opp_overlap 3573571, overlap 3573552 3573566 TTCAAACATAGAAAA CCGGCAAACA TAC CATTTGCCGG TTTTTGTATTTTAAT MADE_03314 3573550 - 3573699 + | hypothetical protein TERM 3724 3574236 - 3574249 + G 78 -5.9 -4.85267 | TCGGGCAAATGTTTG GCTGG AGAA CCGGC TTTTTCATGATTTCT TERM 3725 3574623 - 3574657 + G 72 -4.9 -4.72986 | overlap 3574626 CCGCGTACGCCGCGT CTATGGGCCAGCCAT ATCTA ATGGCAGCCTCATTG TTTTTCATCGGCATC TERM 3726 3574626 - 3574654 + G 70 -5.2 -4.47707 | overlap 3574623 CGTACGCCGCGTCTA TGGGCCAGCCAT ATCTA ATGGCAGCCTCA TTGTTTTTCATCGGC MADE_03315 3573839 - 3574942 + | MFS permease TERM 3727 3574946 - 3574987 + T 83 -11.7 -3.2614 | overlap 3574935 3574950 3574957 GTATCTGGTTGAGCT ACCAGTTAGTGCTGACAAC CTCA GTTGTCAGCACTAACTCAA TTACTCTCAGAACTA TERM 3728 3574950 - 3574983 + T 100 -21.3 -2.58714 | overlap 3574946 3574957 CTGGTTGAGCTACCA GTTAGTGCTGACAAC CTCA GTTGTCAGCACTAAC TCAATTACTCTCAGA MADE_03316 3575254 - 3575000 - | hypothetical protein TERM 3729 3575079 - 3575108 + g 73 -2.1 -5.16206 | gap 1 ATATCTCTTTTAGGC GCAGGC-GCATC ATCTATC GCTGCAGCTTGC TTTTTCTCTTGATTT MADE_03317 3575444 - 3575557 + | hypothetical protein MADE_03318 3576416 - 3575637 - | hypothetical protein MADE_03319 3576694 - 3576813 + | transaldolase MADE_03320 3576887 - 3577069 + | hypothetical protein TERM 3730 3578008 - 3577990 - g 75 -3 -5.1356 | overlap 3577992 3578000 GCCGACCAAGAAAAA CTTGAAGC TAC GCTTCGCG AAAAACTAAGCGCAT MADE_03321 3577066 - 3578025 + | transaldolase TERM 3731 3578262 - 3578276 + G 72 -5.6 -4.46212 | opp_overlap 3578261, overlap 3578264 TGTAAGTTAGAAACC CTTCGC GAC GCGATG TTTTCTGGTGAGCAA MADE_03322 3578040 - 3579689 + | glucose-6-phosphate isomerase MADE_03323 3579786 - 3579664 - | hypothetical protein TERM 3732 3579771 - 3579736 - G 78 -6.1 -4.56978 | opp_overlap 3579741, overlap 3579732 3579741 GGTGCAAATAACAAA CTGAACGGCCAGCTT TTTCGG AAGCTGGCCGTTTTT TGTTGCGGTATTCAT TERM 3733 3579741 - 3579766 + g 100 -15.5 -5.46657 | opp_overlap 3579741 3579736 3579732 AAATAACAAACTGAA CGGCCAGCTTT TTCG GAAGCTGGCCG TTTTTTGTTGCGGTA TERM 3734 3579766 - 3579741 - G 93 -14.8 -3.42458 | opp_overlap 3579741, overlap 3579736 3579732 AAATAACAAACTGAA CGGCCAGCTT TTTCGG AAGCTGGCCG TTTTTTGTTGCGGTA MADE_03324 3580054 - 3580230 + | hypothetical protein TERM 3735 3580260 - 3580237 - T 86 -11.7 -3.39488 | opp_overlap 3580237, overlap 3580232 GAAAGATAAACTGAA GGCCGCCTG ATAAAA CAGACGGCC TTTTTACTTTCTGGC TERM 3736 3580237 - 3580260 + T 93 -9.5 -5.04601 | opp_overlap 3580237 3580232 GAAAGATAAACTGAA GGCCGCCTG ATAAAA CAGACGGCC TTTTTACTTTCTGGC MADE_03325 3581149 - 3580484 - | uracil-DNA glycosylase TERM 3737 3580940 - 3580930 - G 70 -2.4 -5.05037 | GAACAGAAAAACAAA GGCC GTG GGCT TGATTAGGGCCGTGA MADE_03326 3582432 - 3581149 - | threonine synthase TERM 3738 3581255 - 3581275 + g 81 -8.3 -4.45577 | overlap 3581257 AACGGCTTTGGCAAG CTTATTGGG TTA CCCAATACG TTTTCTACCGTTTCT TERM 3739 3582453 - 3582469 + r 70 -7.9 -3.67068 | GTTACCTTTTTTATT GGGCGAA TTC TCCGCCC TTTCAAACTTTTAAT MADE_03327 3583541 - 3582594 - | homoserine kinase TERM 3740 3582911 - 3582899 - G 72 -9.1 -3.52113 | overlap 3582897 ACGCGTGTACAAATA CGCCA AGC TGGCG GCCAAACGTAAGTGC MADE_03328 3586081 - 3583667 - | bifunctional aspartokinase I/homeserine dehydrogenase I TERM 3741 3584375 - 3584390 + g 72 -3.2 -5.07486 | ACGGTAATAAGCCAT GGCG CTGGTATT CGCC TTTTTGTTCGGCGTC TERM 3742 3586200 - 3586179 - R 100 -8 -5.75342 | gap 1, opp_overlap 3586179 3586197 CGTGTGTAAAAAAAA GCCCGCTCT GTGTT AG-GCGGGC TTTCGTTGTCTTTTG TERM 3743 3586179 - 3586200 + r 82 -8.7 -4.13911 | gap 1, opp_overlap 3586179, overlap 3586197 CGTGTGTAAAAAAAA GCCCGCTCTG TGT TAG-GCGGGC TTTCGTTGTCTTTTG MADE_03329 3589049 - 3586545 - | putative excinuclease ABC subunit A TERM 3744 3586577 - 3586588 + g 87 -7.2 -5.16681 | opp_overlap 3586576 3586577 CTTGCTTTAAAAAGG GCGC AGTT GCGC TTTTCTTATTTTTCG MADE_03330 3590049 - 3589171 - | putative transcriptional regulator TERM 3745 3589546 - 3589579 + g 78 -6.1 -4.56597 | gap 1 CTTAAAGTATTGCTC GCTTGCGCACACGT ATAAATG ACGTGTG-GAAAGC TTTTTAGCCACCAGC TERM 3746 3590642 - 3590653 + G 71 -7.2 -4.04206 | opp_overlap 3590628 AGGCCTAATGCCAGA CGGC ACAA GCCG TTTCTCTAAAGATGG MADE_03331 3590241 - 3591398 + | putative alcohol dehydrogenase TERM 3747 3591443 - 3591425 - f 84 -10.3 -3.85389 | opp_overlap 3591425 TTGTAAGAACGCAAA GGAGAGG TTAGG CCTCTCC TTTTTTTATTCTCTT TERM 3748 3591425 - 3591443 + F 100 -11 -5.94214 | opp_overlap 3591425 TTGTAAGAACGCAAA GGAGAGGT TAG GCCTCTCC TTTTTTTATTCTCTT TERM 3749 3592110 - 3592121 + G 74 -7.2 -4.20531 | overlap 3592108 CTGTAAACTGAATTG GCGG GGTG CCGC TTTTACCTACCTATA MADE_03332 3591622 - 3592308 + | hypothetical protein TERM 3750 3592433 - 3592392 - f 83 -12.7 -2.91582 | opp_overlap 3592392 3592394 3592409, overlap 3592363 3592361 3592359 3592394 3592399 3592413 3592415 TACCTTATTGACACA TATGAAATTTCATATACGA TACA TCACATACGAAATTTCATA TGTGATGGAACTTAT TERM 3751 3592431 - 3592394 - f 78 -10.9 -3.0094 | opp_overlap 3592394 3592392 3592409, overlap 3592363 3592361 3592359 3592392 3592399 3592413 3592415 CCTTATTGACACATA TGAAATTTCATATACGA TACA TCACATACGAAATTTCA TATGTGATGGAACTT TERM 3752 3592440 - 3592413 - f 81 -12.2 -2.89177 | opp_overlap 3592394 3592392 3592409, overlap 3592399 3592394 3592392 3592415 ATTTCATATACGATA CATCACATACGA AATT TCATATGTGATG GAACTTATGTCTACG MADE_03333 3592438 - 3592779 + | predicted transcriptional regulator MADE_03334 3592976 - 3593362 + | arsenate reductase MADE_03335 3593398 - 3594108 + | NADPH-dependent FMN reductase MADE_03336 3594121 - 3595176 + | arsenical pump membrane protein, putative TERM 3753 3595303 - 3595259 - T 100 -21.7 -3.23853 | opp_overlap 3595268, overlap 3595261 3595268 GCGCTTTAACGAAGA GATAACAAAGAAGGGCGAACC ATG GGTTCGCCCTTCTTTTTTAAC CAGTTACGCGGTTTT TERM 3754 3595301 - 3595261 - T 100 -22.9 -3.18366 | opp_overlap 3595268, overlap 3595259 3595268 GCTTTAACGAAGAGA TAACAAAGAAGGGCGAACC ATG GGTTCGCCCTTCTTTTTTA ACCAGTTACGCGGTT TERM 3755 3595294 - 3595268 - T 100 -21 -4.46254 | opp_overlap 3595268, overlap 3595261 3595259 CGAAGAGATAACAAA GAAGGGCGAACC ATG GGTTCGCCCTTC TTTTTTAACCAGTTA TERM 3756 3595268 - 3595294 + T 100 -21 -5.03145 | opp_overlap 3595261 3595259 3595268 CGAAGAGATAACAAA GAAGGGCGAACC ATG GGTTCGCCCTTC TTTTTTAACCAGTTA MADE_03337 3595721 - 3595323 - | putative response regulator with Chemotaxis-specific methylesterase domain TERM 3757 3596767 - 3596757 - g 70 -2.4 -5.06816 | opp_overlap 3596757 ACTTCCCAACAAAAA GCAC TTT GAGC TTTATATGTCGATGG MADE_03338 3595900 - 3597633 + | bifunctional isocitrate dehydrogenase kinase/phosphatase protein MADE_03339 3597853 - 3598533 + | Response regulator consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain MADE_03340 3598530 - 3599936 + | Signal transduction histidine kinase TERM 3758 3599959 - 3599944 - T 77 -10.4 -3.42621 | opp_overlap 3599944 AACGTTAACGTAGAA GCAGCC TTAA GGCTGC TTTTGCATAAATATG TERM 3759 3599944 - 3599959 + T 89 -10.4 -4.20531 | opp_overlap 3599944 AACGTTAACGTAGAA GCAGCC TTAA GGCTGC TTTTGCATAAATATG MADE_03341 3600507 - 3599950 - | lipoprotein MADE_03342 3601125 - 3600565 - | hypothetical protein TERM 3760 3600803 - 3600759 - G 84 -8 -4.8083 | gap 1, opp_overlap 3600773, overlap 3600752 TAACATCAGGAAAAA TATCTTCCATCAACGCC-AGC CATC GCTCGGCATTGTCCGAAGATA CATCGCCTTGCTTTT MADE_03343 3601233 - 3602156 + | putative D-cysteine desulfhydrase MADE_03344 3602330 - 3602575 + | hypothetical protein TERM 3761 3602593 - 3602613 + T 70 -8.2 -3.72576 | opp_overlap 3602577 3602576 TTACTTCTGATTAAG GGTGCAGC TCTAC GCAGCACC TTTAATCAAAACGAA MADE_03345 3603658 - 3602645 - | Adenosine deaminase MADE_03346 3604758 - 3603946 - | sterol desaturase protein TERM 3762 3604526 - 3604501 - G 79 -4 -5.2015 | overlap 3604502 CCAATAATACAAAAA GTCTTGCAGG ATGAAA CCTGCAAAAA GTGATAATGCCGTAA MADE_03347 3604975 - 3604745 - | putative orphan protein MADE_03348 3605222 - 3604983 - | hypothetical protein MADE_03349 3605261 - 3606304 + | putative transcriptional regulator TERM 3763 3606736 - 3606723 - g 86 -3.1 -5.77853 | gap 1, opp_overlap 3606723, overlap 3606724 AACCGGCAAAAAAAA GC-GAG AGT CTCAGC TTATAGAGCAGCTGC MADE_03350 3606553 - 3606963 + | hypothetical protein TERM 3764 3607502 - 3607520 + G 83 -10.2 -3.72893 | AGATGCAGGTATTAT GGCGCTGC TAG GCAGCGGC TTTGATCCAGGCGTA MADE_03351 3607104 - 3608306 + | Carboxynorspermidine dehydrogenase TERM 3765 3608318 - 3608337 + F 100 -13.6 -4.8622 | opp_overlap 3608318 ATAAGTAAGACATAA GGGCGCTT TATT AAGCGCCC TTTTTAATTGAAGCC TERM 3766 3608337 - 3608318 - f 95 -13.6 -3.73512 | opp_overlap 3608318 ATAAGTAAGACATAA GGGCGCTT TATT AAGCGCCC TTTTTAATTGAAGCC MADE_03352 3608459 - 3609589 + | Carboxynorspermidine decarboxylase TERM 3767 3609631 - 3609602 - T 100 -15.1 -3.93673 | opp_overlap 3609604 3609609, overlap 3609604 3609609 TAAACACGTTACAAA CACAAAACCCGCC AGTT GGCGGGTTTTGTT TGTCTAAGCTTTACG TERM 3768 3609629 - 3609604 - T 100 -17.7 -3.54848 | opp_overlap 3609604 3609609, overlap 3609602 3609609 AACACGTTACAAACA CAAAACCCGCC AGTT GGCGGGTTTTG TTTGTCTAAGCTTTA TERM 3769 3609604 - 3609629 + T 100 -17.7 -4.07562 | opp_overlap 3609602 3609604 3609609, overlap 3609609 AACACGTTACAAACA CAAAACCCGCC AGTT GGCGGGTTTTG TTTGTCTAAGCTTTA TERM 3770 3609624 - 3609609 - T 100 -11.8 -4.84918 | opp_overlap 3609604 3609609, overlap 3609604 3609602 GTTACAAACACAAAA CCCGCC AGTT GGCGGG TTTTGTTTGTCTAAG TERM 3771 3609609 - 3609624 + T 100 -11.8 -5.05113 | opp_overlap 3609609 3609604 3609602, overlap 3609604 GTTACAAACACAAAA CCCGCC AGTT GGCGGG TTTTGTTTGTCTAAG TERM 3772 3609673 - 3609653 - T 70 -8.2 -3.78953 | opp_overlap 3609658 AGCTTTACGACTAAA CCACGCCG CTTCC CGACGCGG TTTCAGAGTTATCAA MADE_03353 3609917 - 3609648 - | hypothetical protein MADE_03354 3610896 - 3610018 - | putative methyltransferase TERM 3773 3610085 - 3610095 + g 70 -2.4 -5.00884 | overlap 3610090 TAATGGCTGGCTACC ACGG CTG CCGC TTTTTTAAGCGGCAT TERM 3774 3610090 - 3610109 + g 80 -12.2 -3.08813 | overlap 3610085 GCTGGCTACCACGGC TGCCGCTT TTTT AAGCGGCA TATGTTCACATAACG TERM 3775 3611860 - 3611847 - g 72 -5.2 -4.59853 | opp_overlap 3611853 CCAAGTGGTGAAAAA CGGC ATTATG GCCG CATATTATACCGATG MADE_03355 3610996 - 3612996 + | putative lipoprotein MADE_03356 3613001 - 3613342 + | Sigma-54 factor MADE_03357 3613321 - 3613446 + | hypothetical protein MADE_03358 3613523 - 3614611 + | putative lipopolysaccharide core biosynthesis mannosyltransferase TERM 3776 3614774 - 3614745 - f 83 -6.5 -5.05782 | ATGCAGCGCAAAAAA TTTCACTAAATGG TCTG CCGTTTGGTGAAA ACAAAGAGATGACAC MADE_03359 3614790 - 3615386 + | phosphoheptose isomerase TERM 3777 3615568 - 3615556 - g 74 -6.9 -4.30576 | GCTTGACGATCAAAA CGCCG ATG CAGCG GTATCCTATCAATGG MADE_03360 3615473 - 3615985 + | transport-associated MADE_03361 3616002 - 3617390 + | MFS permease MADE_03362 3617580 - 3618203 + | hypothetical protein TERM 3778 3618189 - 3618178 - f 75 -5.8 -4.79352 | overlap 3618185 GCAGTGAGAAGAAAA GAGC AAAT GCTC AGATATCAATTTAAG MADE_03363 3618261 - 3618590 + | emrE protein MADE_03364 3618577 - 3619845 + | sensor histidine kinase, putative MADE_03365 3619842 - 3620459 + | DNA-binding response regulator, LuxR family protein MADE_03366 3620813 - 3620481 - | hypothetical protein MADE_03367 3621134 - 3620859 - | hypothetical protein TERM 3779 3621234 - 3621217 - R 100 -11.3 -6.00814 | opp_overlap 3621217 AATAAGCAAAAAAAA GCCAGTC GGAA GACTGGC TTTTTAATCATAACT TERM 3780 3621217 - 3621234 + r 95 -11.3 -4.77438 | opp_overlap 3621217 AATAAGCAAAAAAAA GCCAGTC GGAA GACTGGC TTTTTAATCATAACT MADE_03368 3623525 - 3621261 - | putative TonB-dependent receptor TERM 3781 3623700 - 3623671 - H 76 -2.3 -5.49234 | gap 1 ACAGGCAATAAAAAA GTAAG-TCGCAATA AAA CATTACAAACTTAC TTTCAATGAAACTCT MADE_03369 3624322 - 3624984 + | Transcriptional regulator, GntR family protein TERM 3782 3625366 - 3625356 - g 84 -8.2 -4.70659 | overlap 3625357 3625358 CGCGATATGGAAAAA GCCG GCG CGGC CGCGGTACATATGGA MADE_03370 3625050 - 3625925 + | putative methylisocitrate lyase TERM 3783 3626451 - 3626435 - g 78 -6.5 -4.60041 | opp_overlap 3626435, overlap 3626436 ACGCATTCCTAAAAA CGCCCAC CCT ATGGACG TGCTTCGCACTGGCT MADE_03371 3626163 - 3627284 + | citrate synthase TERM 3784 3627359 - 3627333 - g 73 -10.9 -2.7264 | opp_overlap 3627356, overlap 3627321 3627332 AAACCGCTTCCAAAT GCGGGTATCGA TTTTT TCGATACCCGT GAAGCGGTTGATGCC TERM 3785 3628450 - 3628435 - g 74 -8.2 -3.92869 | CCAGCGACTTAGAAA GCCGCG GTAT CGCAGC AAAATGGGAAGAGGA MADE_03372 3627300 - 3629891 + | aconitate hydratase 1 TERM 3786 3630097 - 3630068 - f 77 -9.9 -3.59979 | GCTTGTGATTTGAAA CCTTCCAGCCGCA TGGA TGCGGCTGGGGAG CGCACACGGACGTGT TERM 3787 3630290 - 3630276 - g 72 -2.7 -4.9218 | opp_overlap 3630283, overlap 3630277 GAGGCAGCACAAAAA CCGGG ACCAG CCCGT GATGCGCTGCTTCTT MADE_03373 3630120 - 3631349 + | putative AcnD-accessory protein PrpF TERM 3788 3631418 - 3631400 - f 77 -8.8 -3.88015 | opp_overlap 3631401, overlap 3631401 GACATAAGTATGAAA CGCCCTCT GTA AGAGGGCT TTTTTTTCTTTTATT TERM 3789 3631417 - 3631401 - f 83 -12.3 -2.92086 | opp_overlap 3631401, overlap 3631400 ACATAAGTATGAAAC GCCCTCT GTA AGAGGGC TTTTTTTTCTTTTAT TERM 3790 3631401 - 3631417 + F 100 -12.3 -6.37666 | opp_overlap 3631401 3631400 ACATAAGTATGAAAC GCCCTCT GTA AGAGGGC TTTTTTTTCTTTTAT TERM 3791 3631997 - 3631982 - g 79 -7.6 -4.39568 | ATCGAGATATTAAAA TGGTCA TTGC TGACCA CCGTATGCCTAATAT MADE_03374 3631471 - 3632730 + | Response regulator containing a CheY-like receiver domain and a GGDEF domain TERM 3792 3632759 - 3632745 - T 77 -5 -4.91511 | ACCCTATTACAAAAA CCAATC TCT AATTGG TAAGGTAGCTGCCCC MADE_03375 3633899 - 3632736 - | transcriptional regulator TERM 3793 3632825 - 3632837 + g 71 -10.5 -2.67705 | overlap 3632814 CTATTTCAGGCATGG GGCGC TTC GCGCC TCGTCTAAATTGTGC TERM 3794 3633237 - 3633213 - G 76 -8.7 -4.05033 | opp_overlap 3633216, overlap 3633216 GGCACTCGATACAAA GAAGTACACAA AGT TTTTGTACTTC CTGCCCACTCCAGCT MADE_03376 3635191 - 3633962 - | Hydroxypyruvate reductase TERM 3795 3635223 - 3635199 - R 70 -2.9 -5.1675 | opp_overlap 3635211, overlap 3635211 TTATTCATGAAAAAA CCTTTTATAAA AGC CCTCTAAAAGG GCTTTATGAAAACAG TERM 3796 3635211 - 3635225 + r 71 -7.1 -3.85698 | opp_overlap 3635199 3635211 AAACCTTTTATAAAA GCCCT CTAAA AGGGC TTTATGAAAACAGCG TERM 3797 3635225 - 3635211 - R 80 -7.8 -4.39002 | opp_overlap 3635211, overlap 3635199 AAACCTTTTATAAAA GCCCTC TAA AAGGGC TTTATGAAAACAGCG MADE_03377 3636798 - 3635227 - | sodium:solute symporter family protein TERM 3798 3636861 - 3636835 - R 100 -9.5 -5.63517 | TGGCGAAATAAAAAA CTGATAGCCCC TAATT GAGACTATCAG CGAGGGGGAGTGTCA MADE_03378 3639280 - 3636884 - | TonB-dependent receptor TERM 3799 3638131 - 3638121 - G 70 -2.4 -5.06816 | AGCTCTGAAGAAAAA TCGG TTG CCGG CCGGTCTCTGTCTAG TERM 3800 3638711 - 3638725 + g 78 -5.7 -4.88407 | ATAAAAACCGGACAT GGCAT AGTAC ATGCC TTTTTCATTCAGTGG TERM 3801 3639316 - 3639298 - R 86 -10.3 -4.07568 | CGTTTCCGGCTAAAA GCGACGA AATAG TCGTCGC AAGAAACCCAAGTCT MADE_03379 3639505 - 3639359 - | ubiquinol-cytochrome c reductase, cytochrome c1 MADE_03380 3640780 - 3639515 - | ubiquinol-cytochrome c reductase, cytochrome B MADE_03381 3641420 - 3640782 - | Ubiquinol-cytochrome C reductase iron-sulfur subunit TERM 3802 3641810 - 3641825 + r 91 -11.8 -4.13767 | opp_overlap 3641810 GCAGGCAATAAAAAA CCCGGC ATAA GCCGGG TTTTGCAATACAAAA TERM 3803 3641825 - 3641810 - R 100 -11.8 -5.4833 | opp_overlap 3641810 GCAGGCAATAAAAAA CCCGGC ATAA GCCGGG TTTTGCAATACAAAA MADE_03382 3642092 - 3641892 - | ribosomal protein S9 MADE_03383 3642533 - 3642105 - | 50S ribosomal protein L13 TERM 3804 3642925 - 3642941 + H 73 -5.9 -4.50976 | CCGCACAATAGAGTT CTTAAGG TTT TCTTAAG TTTTCTGGTATACAC MADE_03384 3642988 - 3643653 + | response regulator TERM 3805 3644576 - 3644561 - g 70 -2.5 -4.93812 | AAAATAGAAAATAAA GCACA GGAAAT TGCGC TGGAAGGAGATGAGG MADE_03385 3643709 - 3644944 + | sensor histidine kinase MADE_03386 3644928 - 3645287 + | hypothetical protein MADE_03387 3645277 - 3646038 + | iron permease, FTR1 family protein TERM 3806 3646030 - 3646045 + F 89 -5.4 -5.38249 | CCTCTCAAGGAGGCC GCATGT TAAA ACGTGC TTTTTTCTCCTTAAT MADE_03388 3646032 - 3646736 + | hypothetical protein MADE_03389 3646827 - 3647564 + | glycosyl transferase, group 2 family protein MADE_03390 3647554 - 3648231 + | hypothetical protein MADE_03391 3648237 - 3650039 + | glycosyl transferase, family 39 TERM 3807 3650184 - 3650209 + G 76 -11.9 -2.68823 | opp_overlap 3650188, overlap 3650183 TAGCTTCAGTTCCAA CCCAGGTTGCT AGTC AGCAACCTGCG ATTGTCTCAAAGGAA MADE_03392 3650144 - 3650899 + | hypothetical protein TERM 3808 3651249 - 3651239 - g 71 -6.8 -4.11692 | opp_overlap 3651238 TATTGATTGCGAAAA CGAC ATT GTCG CTCATTCACTCAAAC MADE_03393 3650889 - 3652403 + | putative long-chain-fatty-acid-CoA ligase MADE_03394 3652407 - 3653078 + | putative transcriptional activator, TenA family MADE_03395 3653144 - 3653989 + | short-chain alcohol dehydrogenase-like protein TERM 3809 3654630 - 3654608 - g 71 -6.8 -4.15788 | opp_overlap 3654609, overlap 3654587 AAGTTCGCCAAGAAA GCGCTCGACG CCC CAGCGCGCGC TGATCGTCCTATTGC MADE_03396 3654005 - 3654706 + | TPR repeats containing protein TERM 3810 3654754 - 3654725 - f 72 -9.4 -2.98088 | opp_overlap 3654725 3654726, overlap 3654731 CCCCAAAGGTATACA GGGAAAGGCAAT GCTCTT ATTGCCTTTCCA TTTTCAACAAGTATT TERM 3811 3654725 - 3654754 + F 86 -10.1 -4.09511 | opp_overlap 3654725 3654731, overlap 3654726 CCCCAAAGGTATACA GGGAAAGGCAATG CTCT TATTGCCTTTCCA TTTTCAACAAGTATT TERM 3812 3654726 - 3654753 + F 93 -13.6 -3.05224 | opp_overlap 3654725 3654731, overlap 3654725 CCCAAAGGTATACAG GGAAAGGCAATG CTCT TATTGCCTTTCC ATTTTCAACAAGTAT MADE_03397 3654895 - 3655542 + | TPR repeats containing protein TERM 3813 3656293 - 3656265 - g 71 -9.5 -3.12351 | overlap 3656232 3656230 CTGGCTTAGATTCAA CTTCACCTGCGGC GAT GCCGCTGGTCAAA ACATGGTGAGCAAAG MADE_03398 3655726 - 3656916 + | Hydroxymethylglutaryl-coenzyme A reductase MADE_03399 3657370 - 3657002 - | hypothetical protein MADE_03400 3658647 - 3657682 - | MazG protein TERM 3814 3658189 - 3658203 + g 73 -4.2 -4.75404 | overlap 3658191 ACGTTGCTCAGAACG CTGCTT TTT AAGCTG TTTTTCCTGCGCTTT MADE_03401 3660808 - 3658625 - | GTP pyrophosphokinase TERM 3815 3660320 - 3660337 + g 78 -4.8 -5.09173 | opp_overlap 3660320 TCGAGCCACCATAAC GCGGGT TTCTTC ATCCGC TTTTTTAACCTGTTG MADE_03402 3662269 - 3660821 - | RNA methyltransferase, TrmA family protein TERM 3816 3662370 - 3662358 - R 70 -7.7 -3.6869 | GAGACTAAGGCTAAA CCTAC CTT GTAGG TAAAAGCGCCGCGTA MADE_03403 3662800 - 3662420 - | 4-phosphopantetheinyl transferase TERM 3817 3662735 - 3662746 + g 71 -7.2 -4.07568 | TGCCAAACGTTCGTT GGCG GTAT CGCC TTTTCCAAGACGCGA MADE_03404 3663570 - 3662818 - | pyridoxal phosphate biosynthetic protein MADE_03405 3664445 - 3663741 - | DNA repair protein RecO MADE_03406 3664850 - 3664569 - | hypothetical protein MADE_03407 3666698 - 3664977 - | single-stranded-DNA-specific exonuclease RecJ TERM 3818 3666463 - 3666440 - G 70 -5.3 -4.45168 | gap 1 GCGCCAAAATACAAA CCGACG-TAC TAGTT GCACCGTCGG CATCAAAATCGCCAA TERM 3819 3666889 - 3666864 - R 100 -13.5 -4.8667 | opp_overlap 3666871, overlap 3666871 CATACCGCAGAAAAA GAAAAAACGCA CAAG TGCGTTTTTTC TATAAACTTAAGGCG TERM 3820 3666871 - 3666882 + r 89 -5.8 -5.37043 | opp_overlap 3666864 3666871 CAGAAAAAGAAAAAA CGCA CAAG TGCG TTTTTTCTATAAACT TERM 3821 3666882 - 3666871 - R 100 -5.8 -5.98675 | opp_overlap 3666871, overlap 3666864 CAGAAAAAGAAAAAA CGCA CAAG TGCG TTTTTTCTATAAACT MADE_03408 3667639 - 3666917 - | thiol:disulfide interchange protein DsbC MADE_03409 3668887 - 3667961 - | tyrosine recombinase MADE_03410 3669754 - 3668888 - | Dna-J like membrane chaperone protein TERM 3822 3670649 - 3670631 - g 76 -8.9 -3.79633 | opp_overlap 3670630 3670631, overlap 3670609 3670629 TAGAAATGCAAAACA CCCGTTA CCAGT TAACGGG CTTTGTTGGTCAAGG MADE_03411 3670225 - 3672477 + | organic solvent tolerance protein MADE_03412 3672537 - 3673820 + | survival protein surA TERM 3823 3674045 - 3674019 - g 83 -9.4 -4.32034 | opp_overlap 3674018 3674022, overlap 3674022 CGATTACGATGAAAA TAACCCGCAGGT ACA AGCTGCGGGTTC GTTGTTTATAAAGCA TERM 3824 3674042 - 3674022 - g 91 -11.1 -4.27443 | opp_overlap 3674018 3674022, overlap 3674019 TTACGATGAAAATAA CCCGCAGGT ACA AGCTGCGGG TTCGTTGTTTATAAA TERM 3825 3674022 - 3674042 + G 86 -11.1 -3.65699 | opp_overlap 3674022 3674019, overlap 3674018 TTACGATGAAAATAA CCCGCAGGT ACA AGCTGCGGG TTCGTTGTTTATAAA MADE_03413 3673834 - 3674820 + | 4-hydroxythreonine-4-phosphate dehydrogenase,(4-(phosphohydroxy)-L-threonine MADE_03414 3674886 - 3675644 + | dimethyladenosine transferase TERM 3826 3675693 - 3675671 - g 83 -9.9 -4.05033 | gap 1 TGTACTTGATATAAA GGT-GCGGGT GAAA ACCCGCCACC TTCCAGACCACCTTC MADE_03415 3675651 - 3676025 + | ApaG TERM 3827 3676544 - 3676560 + G 79 -7.9 -4.48713 | opp_overlap 3676541, overlap 3676545 CTGAAAAATGGACCG GCGAAGC GCG GCTGCGC TTTATTGTTAATGCC MADE_03416 3676033 - 3676860 + | diadenosinetetraphosphatase TERM 3828 3676894 - 3676870 - f 85 -5.7 -5.19879 | opp_overlap 3676870 GCTTAAAGACAAAAA GGCAGGCTT TGCGAGC AAGTCTGCC TTCCTTGCCCACCTT TERM 3829 3677496 - 3677479 - g 93 -9.9 -4.71061 | AGCCAGAGTTAAAAA GCACACT CAAC AGTGTGC GTGAGTCATACGAAA MADE_03417 3677148 - 3679172 + | methyl-accepting chemotaxis protein TERM 3830 3679199 - 3679219 + T 100 -15.5 -5.80817 | opp_overlap 3679199 TAATACAAACAAAAA CGGCCGATA TCA TATCGGCCG TTTTTTTATCTTACA TERM 3831 3679219 - 3679199 - T 100 -15.5 -5.4659 | opp_overlap 3679199 TAATACAAACAAAAA CGGCCGATA TCA TATCGGCCG TTTTTTTATCTTACA MADE_03418 3680589 - 3679240 - | aspartate kinase III TERM 3832 3680626 - 3680612 - R 80 -6.4 -4.78839 | AACTCCAGAATAAAA CTAGCC TAC AGCTAG CGAAACCGCGCGTTT TERM 3833 3680648 - 3680632 - R 83 -10.8 -3.67792 | CTACAGCTAGCGAAA CCGCGC GTTTT GCGCGG TCAATCAATCGTTAC MADE_03419 3681134 - 3680649 - | Exported protein TERM 3834 3681150 - 3681126 - G 85 -3.4 -5.60993 | opp_overlap 3681126 TTCGCCATAAAAAAA GCCGGTCATC TCAAG GGGAACCGGC TTTGTAGTTTATACA MADE_03420 3683837 - 3681171 - | aconitate hydratase TERM 3835 3682963 - 3682943 - G 71 -3.9 -4.86731 | overlap 3682945 TGGTGTTAAAGAAAA TAGGCGCAA CTT TTGAGCCGA TACATACACCACCGC TERM 3836 3683606 - 3683587 - G 74 -3.5 -5.09225 | opp_overlap 3683587, overlap 3683588 ATGGCACTTAAAAAA CCGGCTT TAACGT AAGCCGC TTCATCGACGCCAGG MADE_03421 3685099 - 3684146 - | DNA ligase TERM 3837 3684254 - 3684271 + g 72 -4.7 -4.56597 | opp_overlap 3684234 3684233, overlap 3684250 CCAGCTGCCAACAGC GGGCGGC GCTC GACGCTC TTTTTCAGAAAAGCC TERM 3838 3684863 - 3684876 + g 72 -3.1 -5.00467 | gap 1, opp_overlap 3684863, overlap 3684864 ATTGGCAGTAAACCA T-GCCG GAG CGGCTA TTTTGTTGTTATTGC TERM 3839 3684864 - 3684874 + g 76 -8.2 -4.10348 | opp_overlap 3684863, overlap 3684863 TTGGCAGTAAACCAT GCCG GAG CGGC TATTTTGTTGTTATT TERM 3840 3685162 - 3685196 + r 100 -16.6 -5.50499 | opp_overlap 3685162 3685166, overlap 3685166 ATAGAGACGTTAAAA CAGAGAAGGCAGAGTA AAT TACTCTGCCTTCTTGG TTTTTTTAACTGTAC TERM 3841 3685195 - 3685162 - R 100 -16.3 -4.18802 | gap 1, opp_overlap 3685162 3685166, overlap 3685166 ATAGAGACGTTAAAA CAGAGAAGGCAGAGTA AAT TACTCTGCCTTCT-TG GTTTTTTTAACTGTA TERM 3842 3685192 - 3685166 - R 100 -18.2 -3.41767 | opp_overlap 3685162 3685166, overlap 3685162 AGACGTTAAAACAGA GAAGGCAGAGTA AAT TACTCTGCCTTC TTGGTTTTTTTAACT TERM 3843 3685166 - 3685192 + r 100 -18.2 -4.04789 | opp_overlap 3685166 3685162, overlap 3685162 AGACGTTAAAACAGA GAAGGCAGAGTA AAT TACTCTGCCTTC TTGGTTTTTTTAACT MADE_03422 3685475 - 3685245 - | DNA ligase TERM 3844 3685803 - 3685785 - H 71 -6 -4.1552 | opp_overlap 3685785 3685784 3685781 CATCGCCCTAATAAA GTTGCTAA CAT TTAGCGAC CTTGTTGGCTCGAAC MADE_03423 3685933 - 3686937 + | phosphorylase family protein TERM 3845 3686952 - 3686998 + T 100 -14.1 -3.57792 | gap 1, opp_overlap 3686965, overlap 3686965 AATAATAAATGGGGT CAGAA-ATAAAAAAGCCCCAAC CTTG GTTGGGGCTTTTTAATGTTTTG TTTAGCGGTAAGTGC TERM 3846 3686984 - 3686965 - T 100 -13.6 -5.72622 | opp_overlap 3686952 3686965 GTCAGAAATAAAAAA GCCCCAAC CTTG GTTGGGGC TTTTTAATGTTTTGT TERM 3847 3686965 - 3686984 + T 100 -13.6 -4.99972 | opp_overlap 3686965, overlap 3686952 GTCAGAAATAAAAAA GCCCCAAC CTTG GTTGGGGC TTTTTAATGTTTTGT MADE_03424 3689824 - 3687014 - | aconitate hydratase MADE_03425 3691426 - 3690212 - | dehydrogenase with soluble quinoprotein glucose dehydrogenase domain TERM 3848 3690743 - 3690731 - G 79 -10.5 -3.53091 | opp_overlap 3690725 AGGCGCCTCTGGAAA GGCCG GTG CGGCC AGCGGCTTACCATTA MADE_03426 3691554 - 3692030 + | putative orphan protein; putative membrane protein TERM 3849 3692530 - 3692517 - g 71 -3.9 -4.78107 | TACTAGTATTAAAAA TGATA CGAG TATCA ATACGGTTATTACCA MADE_03427 3692140 - 3693708 + | long-chain-fatty-acid--CoA ligase TERM 3850 3693736 - 3693759 + F 77 -6.1 -4.62069 | gap 1, opp_overlap 3693731 3693736 3693750 GAAGTAATCAGAAAA CGCATAGTGA TAACT TC-CTATGCG TTTTTCACATAAAAA TERM 3851 3693759 - 3693736 - f 77 -6.1 -4.58213 | gap 1, opp_overlap 3693736, overlap 3693731 3693750 GAAGTAATCAGAAAA CGCATAGTGA TAACT TC-CTATGCG TTTTTCACATAAAAA TERM 3852 3693837 - 3693818 - f 74 -5.1 -4.66609 | TAGCTTATTGAAAAA GTTTTAG TTCTGG CTAAAAC TTAACCTTACACTTT TERM 3853 3694507 - 3694496 - g 71 -3.6 -4.77036 | GTTCACTATCAAAAA GGCG ACGG CACC CTTCTTAAAAGAGAG TERM 3854 3695902 - 3695884 - g 73 -9.6 -3.35088 | opp_overlap 3695874 3695883 3695881 3695884, overlap 3695874 AAAGTGGCGAACTAA GCGCCTAT TGA ATAAGCGC GTGTTAGTGGTCGAT MADE_03428 3693947 - 3696835 + | PAS signal transduction protein MADE_03429 3696819 - 3697895 + | two-component system response regulator (hybrid family) protein TERM 3855 3697970 - 3697999 + T 83 -12.3 -2.64107 | opp_overlap 3697976, overlap 3697976 CGGGTCAACGGCAAG AAAAAAGGGTCGA ATTC TCGACCCTTTTTA TCGTGTGAAGCTTTA TERM 3856 3697993 - 3697976 - T 100 -11.3 -5.4756 | opp_overlap 3697970 3697976 AACGGCAAGAAAAAA GGGTCGA ATTC TCGACCC TTTTTATCGTGTGAA TERM 3857 3697976 - 3697993 + T 95 -11.3 -4.95155 | opp_overlap 3697976, overlap 3697970 AACGGCAAGAAAAAA GGGTCGA ATTC TCGACCC TTTTTATCGTGTGAA MADE_03430 3699349 - 3698024 - | putative unknown membrane associated protein TERM 3858 3698052 - 3698066 + g 73 -7.8 -4.19238 | AGCTCGGAAGCCAGT GCGTCA GCT TGGCGC TTTTCGCCTTGAACA TERM 3859 3698095 - 3698112 + g 86 -9.1 -4.53607 | CAAACTGTTTCCACT GCTGTGC CATA GCACGGC TTTTCTGATGCTTTT MADE_03431 3699964 - 3699356 - | putative TonB2 protein MADE_03432 3700375 - 3699968 - | Biopolymer transport protein TERM 3860 3700131 - 3700151 + g 71 -9.7 -3.17714 | opp_overlap 3700135, overlap 3700135 TTCGCCTGTACTGCA CGAACGTCG ATG CGGCGTTTG TTAATCCAAATTTCG TERM 3861 3700135 - 3700147 + g 74 -6.9 -4.2461 | opp_overlap 3700135, overlap 3700131 CCTGTACTGCACGAA CGTCG ATG CGGCG TTTGTTAATCCAAAT MADE_03433 3700806 - 3700408 - | TonB system biopolymer transport component TERM 3862 3700886 - 3700859 - R 71 -9.8 -2.867 | opp_overlap 3700859 3700861, overlap 3700851 ACGAATATCAGCAGA CCGATGACCAGG AGAA CCTGGCCACCTG TTTCTGTGAAGTCGC MADE_03434 3702293 - 3700929 - | putative Tol protein MADE_03435 3703065 - 3702307 - | TonB system biopolymer transport component TERM 3863 3703206 - 3703223 + r 84 -12.7 -2.9627 | opp_overlap 3703206 ATTGCACATAAAAAA GGCCGCT GGTT AGCGGCC TCTGTAATAAGTTAA TERM 3864 3703223 - 3703206 - R 100 -12.7 -5.37043 | opp_overlap 3703206 ATTGCACATAAAAAA GGCCGCT GGTT AGCGGCC TCTGTAATAAGTTAA MADE_03436 3705812 - 3703242 - | TonB-dependent receptor TERM 3865 3705949 - 3705984 + r 74 -4.8 -4.70659 | opp_overlap 3705952, overlap 3705952 TGTCTTACAAACTTA AAAGCAAGTGCG CCACTGTTGCAA CGCACTTGCTTG TTTTTAGCTATGCGA TERM 3866 3705981 - 3705952 - R 100 -12.9 -4.39571 | opp_overlap 3705952 3705949 CTTACAAACTTAAAA GCAAGTGCGCCAC TGTT GCAACGCACTTGC TTGTTTTTAGCTATG TERM 3867 3705952 - 3705981 + r 74 -6.5 -4.46215 | opp_overlap 3705952, overlap 3705949 CTTACAAACTTAAAA GCAAGTGCG CCACTGTTGCAA CGCACTTGC TTGTTTTTAGCTATG MADE_03437 3708800 - 3706008 - | putative lipoprotein TERM 3868 3708968 - 3708980 + r 90 -4.9 -5.55664 | CTCCGTTCAAGCTTT TAGTT TTT AACTA TTTTTTTGATACTAG TERM 3869 3709086 - 3709097 + r 80 -4.4 -5.252 | overlap 3709077 ATAGATGCCATTGGG TGCA TGGC TGCA TTTTTTATGACGCTA MADE_03438 3710120 - 3709170 - | putative phosphate ABC transporter TERM 3870 3709780 - 3709760 - G 77 -3.9 -5.1356 | opp_overlap 3709759 3709760, overlap 3709754 3709762 GTCTATCAACAAAAA TTGCGATGG CAT CCATTGCCA CTTTTAATACTGTGG MADE_03439 3711541 - 3710240 - | phosphate regulon sensor protein PhoR TERM 3871 3710964 - 3710947 - G 74 -8.4 -3.92522 | overlap 3710961 CTTCAAGTTGAGAAA CCCGTG TTATAT CACGGG CAATAAGCAGCAAGT MADE_03440 3712330 - 3711641 - | putative DNA-binding response regulator PhoB TERM 3872 3713459 - 3713445 - g 71 -3.5 -4.77036 | TTGGAGCAGCAAAAA GACGA ACTTA TCGCC CATCAGCGGGAGTTG TERM 3873 3714247 - 3714227 - g 70 -9.1 -3.38768 | overlap 3714228 GCATATTATGTATAA CTTAGTGAC GCA GTCACTAAA CGGGCATATTGAAGC TERM 3874 3714246 - 3714228 - g 71 -10.4 -2.6294 | overlap 3714227 CATATTATGTATAAC TTAGTGAC GCA GTCACTAA ACGGGCATATTGAAG MADE_03441 3712824 - 3714323 + | Signal transduction histidine kinase TERM 3875 3714635 - 3714649 + G 78 -6.4 -4.66163 | opp_overlap 3714647 AGGCACCATGTTTCA CGTTGT TCA ACAGCG TTTTTGGATAACGCT MADE_03442 3714396 - 3715370 + | recombination associated protein TERM 3876 3715455 - 3715429 - T 83 -11 -3.77219 | opp_overlap 3715429 AGCATTTAATTCAAA GCCTAATCACTA TTA CAGTAATTAGGC TTTTCATAAATATCC TERM 3877 3715429 - 3715455 + T 77 -8.1 -4.29738 | opp_overlap 3715429 AGCATTTAATTCAAA GCCTAATCACT ATTAC AGTAATTAGGC TTTTCATAAATATCC TERM 3878 3715494 - 3715511 + T 70 -2.7 -5.00884 | overlap 3715496 CCGTTTCTAATTAGC TTGCTTT TGTA GAAGCGA TTTTTTACAAAGGCT TERM 3879 3715496 - 3715525 + T 71 -7.3 -3.86897 | opp_overlap 3715523, overlap 3715494 GTTTCTAATTAGCTT GCTTTTGTAGAAG CGAT TTTTTACAAAGGC TTTCTAGCCGCTCAA MADE_03443 3716186 - 3715560 - | transcriptional regulator, HTH_3 family protein TERM 3880 3716222 - 3716166 - G 100 -21.9 -3.0169 | opp_overlap 3716163 3716189, overlap 3716163 3716180 3716198 AATGTTGATAAAGCA GTTGTGCGCTATAACGCACAAATGGTA AGT TACCTATTGTACGTTATAGCGCACAAA AAGGTAGAGTAGCAC TERM 3881 3716245 - 3716259 + H 71 -4.2 -4.88067 | opp_overlap 3716245 3716247, overlap 3716247 AGTAGCACATAAATA GACGCT AAA AGCGTG TTTTTATCACTCAGT TERM 3882 3716247 - 3716257 + H 71 -6.8 -4.06182 | opp_overlap 3716247 3716245, overlap 3716245 TAGCACATAAATAGA CGCT AAA AGCG TGTTTTTATCACTCA MADE_03444 3716310 - 3717500 + | benzoate transport protein TERM 3883 3717583 - 3717547 - T 80 -4.4 -5.24796 | gap 1, opp_overlap 3717561 CTTACATAACAAAAA GGCCGATAC-GTTTTGA AGAT TCACTTCTGTATCGGCC TAACATTATTGTGTA MADE_03445 3718457 - 3717621 - | putative signal transduction protein MADE_03446 3718871 - 3720565 + | putative orphan protein TERM 3884 3720613 - 3720594 - T 100 -13.6 -4.93696 | opp_overlap 3720594 CTTAAATACCAAAAA GGCCGCTT TCTA AAGCGGCC TTTTTATATGACAGG TERM 3885 3720594 - 3720613 + T 100 -13.6 -4.96848 | opp_overlap 3720594 CTTAAATACCAAAAA GGCCGCTT TCTA AAGCGGCC TTTTTATATGACAGG MADE_03447 3721011 - 3720640 - | Diadenosine tetraphosphate (Ap4A) hydrolase MADE_03448 3721968 - 3721168 - | undecaprenyl pyrophosphate phosphatase TERM 3886 3721236 - 3721226 - G 72 -3.2 -5.00196 | overlap 3721227 3721230 CGGTAAATAACAAAA GGCA GCA TACC AATGCGTGCAATCCA MADE_03449 3722471 - 3721977 - | 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase TERM 3887 3722197 - 3722211 + g 76 -4.3 -5.08178 | opp_overlap 3722192 AGATCTAAATCAAGG GTTCT TGCAC AGAAC TTTTTGTCTGTGTGT MADE_03450 3722824 - 3722471 - | dihydroneopterin aldolase FolB, putative TERM 3888 3723314 - 3723304 - g 71 -6.8 -4.1721 | ATGGATATTTTAAAA GGGA CAA TCCC AGTCTACGGCAGCTA TERM 3889 3723673 - 3723648 - g 74 -8.3 -3.89695 | GCGTCACAAAGACAA CATTACCCGTC TAAT GGCAGGTAATG AAAGTAAAGTGTGGG MADE_03451 3723130 - 3723711 + | hypothetical protein MADE_03452 3725044 - 3723701 - | putative type I phosphodiesterase/nucleotide pyrophosphatase protein TERM 3890 3723935 - 3723951 + g 71 -7.9 -3.90586 | opp_overlap 3723935 ACCCGCGTTTTTAAA TCGCGCC GGC GGCGCAA TTTCTAAAATGATAT TERM 3891 3723951 - 3723935 - G 75 -10.1 -3.53091 | opp_overlap 3723935 ACCCGCGTTTTTAAA TCGCGCC GGC GGCGCAA TTTCTAAAATGATAT TERM 3892 3724290 - 3724305 + g 75 -3.2 -5.24129 | overlap 3724291 AGCGCATCGACGTTT TGCACT GCAT GGTGCG TTTTTTCTGAGAAGG TERM 3893 3725005 - 3724987 - G 79 -2.4 -5.48054 | overlap 3724990 AGCAAAATGAAAAAA TTAGCATC GTA AATGCGAA TAACGTGTTTTTCTG MADE_03453 3726131 - 3725106 - | putative O-sialoglycoprotein endopeptidase MADE_03454 3726632 - 3726847 + | ribosomal protein S21 TERM 3894 3726868 - 3726899 + F 75 -10.2 -2.94161 | opp_overlap 3726874, overlap 3726868 3726874 GGTTAAGTAACGAGT CTGAAAGGTGTTGC AATT GCAGCACCTTTCGC GTTTCTGGGCCTTTA TERM 3895 3726868 - 3726900 + F 84 -10 -3.91473 | gap 1, opp_overlap 3726874, overlap 3726868 3726874 GGTTAAGTAACGAGT C-TGAAAGGTGTTGC AATT GCAGCACCTTTCGCG TTTCTGGGCCTTTAT TERM 3896 3726874 - 3726893 + F 80 -10 -3.74347 | opp_overlap 3726874, overlap 3726868 3726868 GTAACGAGTCTGAAA GGTGTTGC AATT GCAGCACC TTTCGCGTTTCTGGG TERM 3897 3726964 - 3726981 + F 76 -7.1 -4.19238 | overlap 3726950 CCCGTTTGTTTCCCT TCAAATG GTTG CATTTGA TTTTCAACTTGGGGC TERM 3898 3727375 - 3727362 - g 79 -2.4 -5.45802 | opp_overlap 3727362 CGTGCAAAAGAAAAA GTAC GTCTTG GTAC TATTCGTATGGCTAT TERM 3899 3727446 - 3727426 - g 72 -6.2 -4.27474 | opp_overlap 3727426, overlap 3727441 AAATCGATGAACAAA TTACGCTA GACGA TAGCGCAA TCTTAGCGGTGTTAA MADE_03455 3727302 - 3727748 + | GatB/YqeY domain protein TERM 3900 3727798 - 3727822 + T 77 -8.6 -3.92963 | opp_overlap 3727792 3727798 AAGATTAAAGACGAA CGAGGGTGTG AATGC CATACCTTCG TTATTCTCATTGTTG TERM 3901 3728253 - 3728239 - T 81 -7.1 -4.56597 | GTCCCTCGTGAAAAA GGCAG TCGCC CTGCC ATGAGCGAAGAGAAA MADE_03456 3729262 - 3728447 - | 11-domain light and oxygen sensing his kinase TERM 3902 3729297 - 3729318 + r 70 -5.8 -4.35524 | opp_overlap 3729297 GACTGCAATAAAAAA GGCCAGTG CGTTAA CACTGACC TTTTAAATTTACGAA TERM 3903 3729318 - 3729297 - R 95 -8.7 -5.46657 | opp_overlap 3729297 GACTGCAATAAAAAA GGCCAGTGC GTTA ACACTGACC TTTTAAATTTACGAA MADE_03457 3730788 - 3729394 - | hypothetical protein TERM 3904 3730329 - 3730319 - G 76 -4 -4.99035 | overlap 3730322 3730324 TCACTCATATAAAAA TCAT AGG ATGA GTCATCCACCGCAAC TERM 3905 3731022 - 3731037 + r 80 -10.4 -3.76607 | opp_overlap 3731022 ACGGGGCGAAAAAAA GCCTGC ATAA GCAGGC TTTAACTGTGTCTTA TERM 3906 3731037 - 3731022 - R 100 -10.4 -5.40474 | opp_overlap 3731022 ACGGGGCGAAAAAAA GCCTGC ATAA GCAGGC TTTAACTGTGTCTTA MADE_03458 3732669 - 3731068 - | cold-active serine alkaline protease TERM 3907 3732367 - 3732381 + g 79 -4.2 -5.14563 | overlap 3732369 CGCCGCTACCATTTT GTGCTT TTT AAGCTC TTTTTTGATAGCGCC TERM 3908 3732601 - 3732615 + g 84 -5 -5.34381 | TTTGCCTATTGCTTG CTTCAA AGA TTGAGG TTTTTCTTTCACTTT MADE_03459 3733414 - 3733268 - | hypothetical protein TERM 3909 3733429 - 3733409 - G 88 -7.5 -5.04601 | opp_overlap 3733409 3733427, overlap 3733403 TTTATAAATGAAAAA GCCCATGCT ATA AGCGTAGGC TCGTTCGAGTCTTAT MADE_03460 3733750 - 3734190 + | hypothetical protein MADE_03461 3734321 - 3734416 + | hypothetical protein MADE_03462 3735153 - 3734413 - | Gm2251 methyltransferase of 23S rRNA MADE_03463 3737571 - 3735154 - | ribonuclease R TERM 3910 3735275 - 3735298 + g 73 -9.6 -3.34398 | overlap 3735274 CCACCTTTGCCTTTG CTCCCCTTCT TATC AGAACGGGAG TCTTTACCAGAGCGG TERM 3911 3735762 - 3735772 + g 74 -5.4 -4.57341 | GCTGCTCAATTTCCT CTAC TGT GTAG TTTTTAGCACCGCTT TERM 3912 3736296 - 3736314 + g 70 -2.2 -5.00616 | overlap 3736297 TTTCAAACTCAATAG CCCCGCGT TTG GCTCGGGC TTTTTTAAGCGCGCG TERM 3913 3737460 - 3737484 + g 72 -6.6 -4.2717 | gap 1, opp_overlap 3737464, overlap 3737464 AGTTACAAATATCAA GAA-ACGACAA AGGC TTGTCGTGTTC TTTTAGTAAACTCAT TERM 3914 3737479 - 3737464 - G 76 -7.6 -4.37337 | opp_overlap 3737460 3737464 ACAAATATCAAGAAA CGACAA AGGC TTGTCG TGTTCTTTTAGTAAA MADE_03464 3737686 - 3737856 + | hypothetical protein MADE_03465 3738242 - 3738036 - | putative plasmid maintenance system antidote protein, XRE family MADE_03466 3738661 - 3738374 - | hypothetical protein TERM 3915 3739100 - 3739119 + G 83 -10.8 -3.79687 | opp_overlap 3739099 3739098, overlap 3739098 GTTCCTACATCAAGC TCGGCTTT AGTT AAAGCCGA TATTTTGTGGGAAAT MADE_03467 3738899 - 3740593 + | Phosphodiesterase/alkaline phosphatase D TERM 3916 3740609 - 3740641 + T 100 -13 -4.56597 | gap 1, opp_overlap 3740612 3740613, overlap 3740613 CTTTCTACAATTTTA TAAGCGTGTATAGGC TTGA GCCTATACACG-TTA TTTTTACAAGAAGAA TERM 3917 3740639 - 3740612 - T 87 -12.8 -3.38291 | opp_overlap 3740609 3740613, overlap 3740613 TCTACAATTTTATAA GCGTGTATAGGC TTGA GCCTATACACGT TATTTTTACAAGAAG TERM 3918 3740638 - 3740613 - T 100 -16.3 -2.62653 | opp_overlap 3740609 3740613, overlap 3740612 CTACAATTTTATAAG CGTGTATAGGC TTGA GCCTATACACG TTATTTTTACAAGAA TERM 3919 3740613 - 3740638 + T 100 -16.3 -4.40561 | opp_overlap 3740613 3740612, overlap 3740609 CTACAATTTTATAAG CGTGTATAGGC TTGA GCCTATACACG TTATTTTTACAAGAA MADE_03468 3741244 - 3740996 - | transcriptional regulator, CopG family TERM 3920 3741379 - 3741369 - R 79 -5.4 -4.90266 | opp_overlap 3741371, overlap 3741371 TGCACCAACTAAAAA CAGA GTC TCTG ATACTCCTTCTTGTA MADE_03469 3743759 - 3741477 - | Outer membrane protein TERM 3921 3742529 - 3742542 + g 70 -5.3 -4.4078 | opp_overlap 3742527, overlap 3742527 TTTCTTCTAATGATG CATTG GTTG CAATG TTTTGGTTCAGCGGA TERM 3922 3742560 - 3742578 + g 70 -9.6 -3.09823 | overlap 3742555 TTGGTTCAGCGGAAT GTTTGAGG TGG CCTCAAGC TGTGCTTTTACCGCA MADE_03470 3743774 - 3743929 + | hypothetical protein TERM 3923 3744135 - 3744114 - f 73 -2.3 -5.31877 | gap 1, overlap 3744115 3744116 AGTTATCACAAAAAA CGCCCCTTTG AAT CAAAGAG-CA AACTAAGTACACTCA MADE_03471 3744190 - 3744483 + | hypothetical protein TERM 3924 3744551 - 3744531 - f 100 -12.6 -4.84017 | opp_overlap 3744531 AATGCTTGATAAAAA CGCTGCAG GGATA CTGCAGCG TTTTTTGTTTTAAAC TERM 3925 3744531 - 3744551 + F 100 -12.6 -5.79595 | opp_overlap 3744531 AATGCTTGATAAAAA CGCTGCAG GGATA CTGCAGCG TTTTTTGTTTTAAAC TERM 3926 3744692 - 3744702 + G 74 -8.2 -3.9712 | opp_overlap 3744677 CTACTTTATTGTAGA GCCG GGC CGGC TTTATCATGAAATAG MADE_03472 3744582 - 3745151 + | Cytochrome b561 family protein MADE_03473 3745909 - 3745265 - | sodium-type flagellar motor component MADE_03474 3746337 - 3746086 - | hypothetical protein MADE_03475 3746528 - 3747994 + | 3-octaprenyl-4-hydroxybenzoate carboxylyase TERM 3927 3748053 - 3748030 - f 89 -9.6 -4.2558 | overlap 3748033 3748048 TATTTTGTATTAAAA CATGCGCTTT TCTT AAAGCGCGTG TAAAGGCGACACGCT TERM 3928 3748050 - 3748033 - f 71 -9.9 -2.83504 | overlap 3748030 3748048 TTTGTATTAAAACAT GCGCTTT TCTT AAAGCGC GTGTAAAGGCGACAC MADE_03476 3748094 - 3748789 + | 2-polyprenylphenol hydroxylase TERM 3929 3748822 - 3748843 + T 100 -12.3 -4.77165 | CTTGTTAATACCTAG CGCCATCGA AATG TCGGTGGCG TTTTATTATCAGCAA MADE_03477 3749292 - 3748852 - | PilT-like protein MADE_03478 3749510 - 3749289 - | hypothetical protein TERM 3930 3749551 - 3749593 + H 77 -8 -4.14392 | opp_overlap 3749556 3749559, overlap 3749556 3749559 ACTGTTTGCTAAGCA TACAACAATCTTTACTTTTT ACC AAAAAGTAAAGATTGTATAA TTTTAGAGCTTGCGA TERM 3931 3749556 - 3749588 + H 100 -16.7 -3.10091 | opp_overlap 3749556 3749559, overlap 3749551 3749559 TTGCTAAGCATACAA CAATCTTTACTTTTT ACC AAAAAGTAAAGATTG TATAATTTTAGAGCT TERM 3932 3749588 - 3749556 - H 100 -16.7 -3.59946 | opp_overlap 3749551 3749556 3749559, overlap 3749559 TTGCTAAGCATACAA CAATCTTTACTTTTT ACC AAAAAGTAAAGATTG TATAATTTTAGAGCT TERM 3933 3749585 - 3749559 - H 93 -12.6 -3.93117 | opp_overlap 3749556 3749551 3749559, overlap 3749556 CTAAGCATACAACAA TCTTTACTTTTT ACC AAAAAGTAAAGA TTGTATAATTTTAGA TERM 3934 3749559 - 3749585 + H 90 -12.6 -3.68757 | opp_overlap 3749559 3749556, overlap 3749556 3749551 CTAAGCATACAACAA TCTTTACTTTTT ACC AAAAAGTAAAGA TTGTATAATTTTAGA TERM 3935 3750484 - 3750464 - g 91 -7.6 -5.20783 | gap 1, opp_overlap 3750481 ACTGAAACAGAAAAA GAAGCG-CG CATG CGTCGCTTC ACGGGCGGCGAAGTT MADE_03479 3749693 - 3751099 + | probable aminopeptidase fused to fibronectin type 3 domain TERM 3936 3751121 - 3751170 + F 74 -9 -3.5332 | gap 1, opp_overlap 3751126, overlap 3751126 TTAACGCTCGGGTTC TGAAACTTAAGCA-CTTCAATAT GCAAA ATATTGATGCTGCTTAAGTTTTG TTAATTTAAAGCTTT TERM 3937 3751165 - 3751126 - f 74 -8.9 -3.53012 | gap 1, opp_overlap 3751121 3751126 GCTCGGGTTCTGAAA CTTAAGCA-CTTCAATAT GCAAA ATATTGATGCTGCTTAAG TTTTGTTAATTTAAA TERM 3938 3751126 - 3751165 + F 90 -8.9 -4.84642 | gap 1, opp_overlap 3751126, overlap 3751121 GCTCGGGTTCTGAAA CTTAAGCA-CTTCAATAT GCAAA ATATTGATGCTGCTTAAG TTTTGTTAATTTAAA TERM 3939 3751491 - 3751501 + G 80 -6.8 -4.59853 | TTGAACTACGGGTTA TGCG CAG CGCA TTTTTAGGCAGTTCG TERM 3940 3752048 - 3752062 + G 74 -7 -4.2461 | opp_overlap 3752047 3752044 3752050 AAAGACGTAAACAAT GACGGC GCG GCCGAC TTTATTGGTCACAGT TERM 3941 3752287 - 3752253 - g 90 -9.5 -4.55287 | gap 2, opp_overlap 3752253 3752257, overlap 3752257 CGCAGTTAGACAAAA CCACCTACCAGCGGTTA TTG CAAC-GCTGGTA-GTGG TTGTTCGCGAATGTT TERM 3942 3752253 - 3752287 + G 72 -9.4 -3.63341 | gap 1, opp_overlap 3752253 3752257, overlap 3752257 CGCAGTTAGACAAAA CCACCTACCAGCGGT TATTGC AACGCTGGTAG-TGG TTGTTCGCGAATGTT MADE_03480 3751259 - 3752284 + | hypothetical protein MADE_03481 3755035 - 3752309 - | Multi-sensor Signal Transduction Histidine Kinase TERM 3943 3754765 - 3754780 + g 79 -9 -4.12198 | opp_overlap 3754764 TCCACTGATAAGCAT GGCGAA CACT TTCGCC TTTTAACGCATTGTG TERM 3944 3755070 - 3755057 - H 71 -5.3 -4.55697 | ACGCCGAGAAATAAA GAAAG CGTG CTTTC ATGGTTGGAGTGTTG MADE_03482 3755268 - 3755819 + | Helix-turn-helix, type 11 TERM 3945 3755898 - 3755920 + G 85 -3.5 -5.54338 | gap 1 ATATTTTATTTCCAA CCATCACTAT GGCA ATGG-GATGG TTTTTATTTTACTTC TERM 3946 3757004 - 3756993 - g 71 -7.2 -4.18018 | GCGGCGTATTGAAAA CCGC TGAT GCGG TAACCCAGCTACCGC MADE_03483 3755831 - 3757204 + | quinol oxidase, subunit I TERM 3947 3757334 - 3757350 + G 93 -13.7 -3.5882 | opp_overlap 3757331 TGGGCGTATTAATCC CGCCTCG TAC CGAGGCG TTTCGCGATGATATG MADE_03484 3757216 - 3758223 + | quinol oxidase, subunit II TERM 3948 3758344 - 3758310 - T 91 -13 -3.16039 | opp_overlap 3758312, overlap 3758312 3758317 AATCAGTTCTAGCAA TAGTGAACATCACTGA GAG TCAGTGGTGTTCACTT TCTCTTCAACGCTAT TERM 3949 3758342 - 3758312 - T 100 -15.6 -3.14051 | opp_overlap 3758312, overlap 3758310 3758317 TCAGTTCTAGCAATA GTGAACATCACTGA GAG TCAGTGGTGTTCAC TTTCTCTTCAACGCT TERM 3950 3758312 - 3758342 + T 100 -17.8 -4.19177 | opp_overlap 3758310 3758312 3758317 TCAGTTCTAGCAATA GTGAACATCACTGA GAG TCAGTGGTGTTCAC TTTCTCTTCAACGCT TERM 3951 3758818 - 3758840 + T 100 -9.8 -5.43621 | opp_overlap 3758816 ATCATTAAATTTATA TGGGGCCCGT AAA ACCGGCCTCA TTTTTTATGGTTTCT MADE_03485 3759351 - 3758869 - | regulatory protein, AsnC/Lrp MADE_03486 3760182 - 3759469 - | hypothetical protein TERM 3952 3760346 - 3760365 + r 100 -15 -4.8143 | opp_overlap 3760346 GAATAGAAAGAAAAA CGGCGGTC AAAT GACCGCCG TTTTTGAATTCTTAG TERM 3953 3760365 - 3760346 - R 100 -15 -5.4659 | opp_overlap 3760346 GAATAGAAAGAAAAA CGGCGGTC AAAT GACCGCCG TTTTTGAATTCTTAG MADE_03487 3760586 - 3760377 - | putative cold shock-like protein cspG MADE_03488 3762470 - 3760881 - | predicted protein kinase MADE_03489 3763168 - 3762533 - | hypothetical protein TERM 3954 3762629 - 3762649 + g 91 -7.5 -5.22006 | opp_overlap 3762625 3762622 AAAATGCATAACGGC CAGCTTGTG GGC CGCTAGCTG TTTTTCTTCTACTAC TERM 3955 3762721 - 3762732 + g 71 -7.2 -4.17491 | GCGCTTTTTCGTGCA CGGC TTTG GCCG TTTTCACCGTTTGAT TERM 3956 3762845 - 3762862 + g 78 -5.5 -4.84527 | GGCTACATTAAGCTC GCCCTCT AAAA ATAGGGC TTTTTGCTGTATGAG MADE_03490 3763953 - 3763168 - | ubiquinone/menaquinone biosynthesis methyltransferase TERM 3957 3764053 - 3764020 - R 74 -6 -4.43477 | opp_overlap 3764020, overlap 3764014 TGTAGCCAAGCAAAA GCTTTATGCCCCAC TTGTGC GTTAGGCATAGAGC TTTGCGTTGGGCCTC MADE_03491 3764769 - 3764068 - | 3-methyl-adenine DNA glycosylase TERM 3958 3764311 - 3764323 + g 80 -6.9 -4.56597 | CGTATTTCCGCCTAA GCGTG CGC CGCGC TTTTTCAAAAACGCC TERM 3959 3764699 - 3764670 - G 100 -15.1 -3.54424 | gap 1, opp_overlap 3764671 3764672, overlap 3764671 CTTCAGCTTTTGAAA GCGGCGCTTGAAGC ATA GCCTCAAGCGCC-C TTTCTCCGCCCTTGC TERM 3960 3764699 - 3764671 - G 90 -15.3 -2.72511 | opp_overlap 3764671 3764672, overlap 3764670 TTCAGCTTTTGAAAG CGGCGCTTGAAGC ATA GCCTCAAGCGCCC TTTCTCCGCCCTTGC TERM 3961 3764671 - 3764699 + g 95 -13.1 -3.87869 | opp_overlap 3764670 3764671, overlap 3764672 TTCAGCTTTTGAAAG CGGCGCTTGAAGC ATA GCCTCAAGCGCCC TTTCTCCGCCCTTGC TERM 3962 3764672 - 3764698 + g 100 -16.6 -2.924 | opp_overlap 3764670 3764671, overlap 3764671 TCAGCTTTTGAAAGC GGCGCTTGAAGC ATA GCCTCAAGCGCC CTTTCTCCGCCCTTG MADE_03492 3766812 - 3764776 - | oligopeptidase A TERM 3963 3765459 - 3765443 - G 72 -5.8 -4.49556 | TCGTGAGTAAATAAA GCAGGC TTGTC GCCTAC CGGCGCATTGAAGTT TERM 3964 3765550 - 3765561 + g 85 -7.2 -5.00616 | GCATTCGTCCATCCA CGCG CCGC CGCG TTTTTTCGCACGGGC TERM 3965 3766072 - 3766086 + g 71 -7.8 -3.93288 | CTTACCTGCATTTGG GCCTTG TTC CGAGGC TTTAGTTGAATAAGC TERM 3966 3766791 - 3766773 - G 72 -3.1 -5.03145 | opp_overlap 3766775, overlap 3766775 CAATCGCGGAAAAAA TAGGTAG TCCAT CTACCTT TTCAATTGCAGGGGT TERM 3967 3766889 - 3766869 - H 76 -7.6 -4.2828 | opp_overlap 3766869 3766861 CTTCACTGATTAAAA GCAAGCTA TTGTT TAGCCTGC TGTTGACCTATCTTG MADE_03493 3767116 - 3767676 + | response regulator TERM 3968 3767724 - 3767735 + G 79 -3 -5.3104 | AATACACCGCATTGT CATA ACGC TATG TTTTGTTTTTAGTAC MADE_03494 3767698 - 3768522 + | ABC-type phosphate/phosphonate transport system, periplasmic component TERM 3969 3769149 - 3769127 - g 81 -4.8 -5.1675 | opp_overlap 3769127 3769131 CGATGCAGTAAAAAA CAATGACTAC AGG GAAGTCTTTG TTCCTGTTCGCGGTA MADE_03495 3768534 - 3770207 + | Signal transduction histidine kinase MADE_03496 3770281 - 3771585 + | response regulator TERM 3970 3772770 - 3772747 - g 86 -11.8 -3.50393 | gap 1 CGGTAGGCGATATAA CCGGAG-AAGC AGA GCTTACTCCGG TGGCAGTTAAAGCGG MADE_03497 3771837 - 3773186 + | glutathione reductase TERM 3971 3773319 - 3773266 - T 100 -12.9 -5.1101 | gap 2, opp_overlap 3773280, overlap 3773267 3773280 TTATTAGGTAAAAAA TCGCATTTAAAAAACCGGCTTTTAC TTTGCG GTAAAAGCCGGTTTTTTA--TGCGC ACTAACTTACTTTTT TERM 3972 3773318 - 3773267 - T 100 -16.4 -3.65883 | gap 2, opp_overlap 3773280, overlap 3773266 3773280 TATTAGGTAAAAAAT CGCATTTAAAAAACCGGCTTTTAC TTTGCG GTAAAAGCCGGTTTTTTA--TGCG CACTAACTTACTTTT TERM 3973 3773280 - 3773307 + T 100 -15 -5.24531 | opp_overlap 3773267 3773266 3773280 ATCGCATTTAAAAAA CCGGCTTTTACT TTGC GGTAAAAGCCGG TTTTTTATGCGCACT TERM 3974 3773307 - 3773280 - T 100 -14.3 -5.09225 | opp_overlap 3773280, overlap 3773267 3773266 ATCGCATTTAAAAAA CCGGCTTTTAC TTTGCG GTAAAAGCCGG TTTTTTATGCGCACT MADE_03498 3775510 - 3773321 - | Anaerobic dehydrogenase TERM 3975 3773887 - 3773905 + g 75 -6.6 -4.46215 | GCTTTTTAAGCGTTA GGCCGTGC GCA GTACTGCC TTCTTTTTCCGTATC TERM 3976 3775388 - 3775405 + g 74 -5.5 -4.65078 | opp_overlap 3775388, overlap 3775381 GTGACCTTGGCTAAA GGGGTTA TCTT TATCCCC TTTTATTGACAGTAT TERM 3977 3775596 - 3775580 - H 71 -9.5 -2.80493 | overlap 3775579 3775582 GCTGTAATAGACAAG CATCACT TAA AGTGATG ATAGAAGCGTTAACC TERM 3978 3775814 - 3775789 - g 100 -10.5 -5.04733 | opp_overlap 3775803, overlap 3775813 TAACGACAAAGAAAA GCCTACTAGCA GTTA CGCTAGTAAGC GCTCTTGGCTTGGGC TERM 3979 3776432 - 3776446 + G 74 -7.1 -4.2349 | opp_overlap 3776431 3776432 CTTTACAGAAAACAC CGTGC CAGGC GCACG TTTTGAATATAACCG TERM 3980 3776658 - 3776641 - g 87 -6.9 -5.14985 | overlap 3776642 TTAAAGAGATAAAAA CCGGCGT AGAA ACGCCGC TTACCCTCGAACTAG TERM 3981 3776657 - 3776642 - g 83 -10.4 -3.67364 | overlap 3776641 TAAAGAGATAAAAAC CGGCGT AGAA ACGCCG CTTACCCTCGAACTA MADE_03499 3775770 - 3779105 + | amidohydrolase TERM 3982 3779152 - 3779178 + F 100 -11.7 -5.59534 | opp_overlap 3779152 TACCACTAGGAAAAA GCCGATAAAGC CCTGT GTTTTATCGGC TTTTTTATTCTGGTT TERM 3983 3779178 - 3779152 - f 93 -9.5 -4.78107 | opp_overlap 3779152 TACCACTAGGAAAAA GCCGATAAAGC CCTGT GTTTTATCGGC TTTTTTATTCTGGTT MADE_03500 3779330 - 3779881 + | hypothetical protein TERM 3984 3780787 - 3780777 - g 72 -3.2 -4.95618 | AATACCAAAAAGAAA CCCT TCC AGAG GCTAAGAAAATCAGA MADE_03501 3780014 - 3781159 + | lipoprotein, putative TERM 3985 3781144 - 3781170 + F 100 -14.6 -3.65991 | opp_overlap 3781143 3781142 3781140 AATGGAAGCAACACC TATGACTGCGCT TTA AGCGTAGTCATA TTCTGTTAAAACCGT TERM 3986 3782141 - 3782117 - g 87 -7.1 -5.19212 | ACCATTAGCAAAAAA CTTAACACGCT GGT AGCGAGTGAAG AGCAAAACAAGATTG TERM 3987 3782291 - 3782272 - g 75 -2.8 -5.10933 | GCAGGCAAAACAAAA TGCCGAAG CTAT CTTAAGCA CGGCAAAACGCCTAA TERM 3988 3782600 - 3782582 - g 73 -10.2 -3.06915 | opp_overlap 3782580 3782579, overlap 3782586 ACCTACCGGATTGAA GGAAGCCG TGA CGGCTACC GCTCTACTATTCGAG MADE_03502 3781223 - 3782680 + | hypothetical protein TERM 3989 3783980 - 3783966 - g 89 -5 -5.64006 | AGCTAACGAAAAAAA TCGTCA GCG TAACGA ACACCAAAGAGACGT MADE_03503 3782692 - 3784674 + | Secreted protein with uncharacterized domain MADE_03504 3784664 - 3784783 + | hypothetical protein TERM 3990 3785229 - 3785219 - g 77 -6.8 -4.37991 | opp_overlap 3785225 TAAAAACACCCAAAA CGTG CAG CACG CGGCCGATGCTATTC MADE_03505 3784800 - 3785570 + | Possible biopolymer transport protein, ExbB family TERM 3991 3786071 - 3786055 - g 75 -6.5 -4.42386 | TTCTCATCGATAAAA GCGCATC GAT GATGGGC GACAACTTGCTCGAT MADE_03506 3785586 - 3786644 + | Secreted protein, containing von Willebrand factor (vWF) type A domain MADE_03507 3786658 - 3787608 + | Secreted protein, containing von Willebrand factor (vWF) type A domain TERM 3992 3787633 - 3787616 - T 84 -10.5 -3.92075 | opp_overlap 3787610 ATTTTTAGGTATAAA GGGCGCC TACA AGCGCCC TTAAGATTAATTAAA MADE_03508 3789230 - 3787686 - | Hydroxymethylglutaryl-coenzyme A reductase TERM 3993 3788739 - 3788755 + g 72 -5.1 -4.64676 | overlap 3788740 CGGATCAATGGAGTA CTGACCA ACA TGGTCAA TTTTCTTACCCGTAG TERM 3994 3788782 - 3788794 + g 80 -5.5 -4.95806 | opp_overlap 3788782 GTAGCGCTTTCAAAA TACGC TTG GCGTG TTTTTATAATGCTTT MADE_03509 3789685 - 3790938 + | membrane-fusion protein MADE_03510 3790938 - 3793112 + | toxin secretion ABC transporter, ATP-binding subunit/permease protein, putative MADE_03511 3793109 - 3793420 + | putative transcriptional regulator, LuxR family protein MADE_03512 3793576 - 3793698 + | hypothetical protein TERM 3995 3793725 - 3793767 + F 77 -7.8 -4.27467 | gap 1 TATCCGTAAACACGG GCAGCGTATGTGCGAGCGA TTTGAC TCGCTA-CGCATGCGTTGC TTTGTTCCGTTCTAA MADE_03513 3793817 - 3794818 + | hypothetical protein MADE_03514 3795027 - 3795356 + | HtaR suppressor protein TERM 3996 3795482 - 3795470 - g 71 -3.3 -4.91109 | TCCTTACGAGAAAAA GACCC AAA GGGTT ACGTTAGAAAAAATG TERM 3997 3795517 - 3795496 - g 77 -3.7 -5.26316 | TTACGTTAGAAAAAA TGCCACTAA ACGT TTAGCTGCA ATTCAAAGGCTAACC TERM 3998 3795614 - 3795643 + G 76 -2.1 -5.32944 | AATAAACATTGGTTT CGAGCGAAGTTCT TCCA ACAATATCGCTTG TTTTTTCGTTATCAC MADE_03515 3795377 - 3795832 + | hypothetical protein TERM 3999 3795842 - 3795862 + T 76 -3.4 -5.19879 | overlap 3795843 TTATAAACGCCCGTC TTACTTTT CACTA AAAAGTAG TTTTTGTATTTCAAA TERM 4000 3795967 - 3796010 + T 75 -10.5 -3.07005 | opp_overlap 3795965, overlap 3795970 GGTAAGATAGTAATC GAAGCTTCCCT-TCGCATTGG ATAA CCAAT-CGTCGGGGAAGCTTC TATTCAACGTTAATT MADE_03516 3797352 - 3796024 - | ATP-dependent protease ATP-binding subunit MADE_03517 3797917 - 3797435 - | ATP-dependent protease peptidase subunit MADE_03518 3798865 - 3798287 - | Sporulation related MADE_03519 3801187 - 3798998 - | primosome assembly protein PriA TERM 4001 3800798 - 3800808 + g 90 -6.8 -5.44721 | GGCGCGAGATAGCGA CGCT GAC AGCG TTTTTTTACCCTCAT MADE_03520 3801542 - 3801754 + | 50S ribosomal subunit protein L31 TERM 4002 3801771 - 3801799 + T 75 -10.4 -3.17382 | opp_overlap 3801778, overlap 3801778 CCTGATATCGAGTTC GAAAAAAGCGCC TATAC GGCGCTTTTTTA TTGCCTGTCATTATT TERM 4003 3801778 - 3801792 + T 95 -8.5 -5.49234 | opp_overlap 3801778, overlap 3801771 TCGAGTTCGAAAAAA GCGCC TATAC GGCGC TTTTTTATTGCCTGT TERM 4004 3801792 - 3801778 - T 90 -8.5 -5.03314 | opp_overlap 3801778 3801771 TCGAGTTCGAAAAAA GCGCC TATAC GGCGC TTTTTTATTGCCTGT MADE_03521 3802239 - 3801922 - | hypothetical protein MADE_03522 3802790 - 3804025 + | NADP-dependent malic enzyme TERM 4005 3804169 - 3804129 - T 100 -17.1 -5.26918 | opp_overlap 3804129 ATATGCCATAAAAAA CGGCGCTATTATTGTGA GATCACT TCACACTAATAGCGCCG TTTTTTGTTAGCATG TERM 4006 3804129 - 3804169 + T 100 -17.8 -5.46657 | opp_overlap 3804129 ATATGCCATAAAAAA CGGCGCTATTATTGTGAG ATCAC TTCACACTAATAGCGCCG TTTTTTGTTAGCATG MADE_03523 3804531 - 3804199 - | transcriptional repressor protein MetJ TERM 4007 3805086 - 3805069 - g 77 -3.4 -5.252 | CAGGGTTAGAAAAAA CAGAGA TGTACG CCTCTG ACTTAGTTGCCTTGT MADE_03524 3804693 - 3805580 + | 5,10-methylenetetrahydrofolate reductase TERM 4008 3805633 - 3805649 + G 95 -7.9 -5.37043 | opp_overlap 3805633 3805631 TATGAATGCAGAACA GGCGCGT AAA AAGCGCC TTTTTTATATCACCT MADE_03525 3805586 - 3805723 + | hypothetical protein TERM 4009 3806350 - 3806361 + G 76 -4.4 -5.08088 | opp_overlap 3806346 3806345 GAAGAATACACTCCT GGTT TAGG AACC TTTTTATTAAGCCTT MADE_03526 3805819 - 3806703 + | tRNA processing exoribonuclease BN; required for maturation of tRNA encoded by bacteriophages; dimer TERM 4010 3806795 - 3806784 - T 73 -5.8 -4.50058 | opp_overlap 3806783 CAGGCAGAATTAAAA GGTG ACTA CACC ACTTCTGCCTACAAG TERM 4011 3806889 - 3806874 - T 100 -10.4 -5.5074 | opp_overlap 3806874 TAAGCCAATAAAAAA GGGAGC GTGC GCTCCC TTTTACATGAAATGT TERM 4012 3806874 - 3806889 + T 89 -10.4 -4.19258 | opp_overlap 3806874 TAAGCCAATAAAAAA GGGAGC GTGC GCTCCC TTTTACATGAAATGT MADE_03527 3807552 - 3806914 - | glutamine synthetase TERM 4013 3807017 - 3807040 + g 71 -7.5 -3.8802 | gap 1, opp_overlap 3807023 GTTGAAAGCTCGCCT TGCAAAGCGC CAATC GCGCT-TGCA TTTAAGTTGTGTTTT MADE_03528 3807791 - 3807549 - | hypothetical protein MADE_03529 3807973 - 3808950 + | proline iminopeptidase TERM 4014 3809067 - 3809057 - g 72 -8.2 -3.80746 | CGTTGAAAAAGAAGA CGGC GAT GCCG AGATTGAAAAGCTTG MADE_03530 3808947 - 3809384 + | D-tyrosyl-tRNA deacylase TERM 4015 3809754 - 3809770 + G 73 -11.5 -2.66272 | opp_overlap 3809746 3809745, overlap 3809752 TCGAAAGGGCGACAT CGTGGCC TGT GGCCGCG TACATTTGAATACCG MADE_03531 3809590 - 3810504 + | fused GNAT family acetyltransferase/PaaI-related uncharacterized conserved domain TERM 4016 3810551 - 3810577 + T 83 -9.5 -3.9642 | opp_overlap 3810557, overlap 3810557 TTGAAAGCAACCATA AAAAAAGCGCC GTTAA GGCGCTTTTTA TTTAATTCAGTCTTT TERM 4017 3810571 - 3810557 - T 100 -8.5 -5.71983 | opp_overlap 3810551 3810557 GCAACCATAAAAAAA GCGCC GTTAA GGCGC TTTTTATTTAATTCA TERM 4018 3810557 - 3810571 + T 95 -8.5 -5.38326 | opp_overlap 3810557, overlap 3810551 GCAACCATAAAAAAA GCGCC GTTAA GGCGC TTTTTATTTAATTCA MADE_03532 3811436 - 3810603 - | RNA polymerase sigma factor MADE_03533 3812069 - 3813295 + | EAL domain protein TERM 4019 3813375 - 3813396 + F 91 -13.1 -3.0263 | opp_overlap 3813367 3813372 TCATACACTAGAGCG TGGCTTAGG ATTT CCTAAGCCA TCTTAAAACCATCAT MADE_03534 3813450 - 3814685 + | diguanylate phosphodiesterase TERM 4020 3814694 - 3814672 - T 82 -11.2 -3.11634 | opp_overlap 3814669 3814672, overlap 3814674 CTTCACACTATCCAA GAGCGACGGC ATA GCTGCCGCTC TACATTACTTGGGCT TERM 4021 3814672 - 3814694 + T 79 -11.2 -2.60423 | opp_overlap 3814672 3814674, overlap 3814669 CTTCACACTATCCAA GAGCGACGGC ATA GCTGCCGCTC TACATTACTTGGGCT MADE_03535 3815679 - 3814699 - | cell division protein TERM 4022 3815449 - 3815467 + g 74 -3.8 -5.06451 | opp_overlap 3815428, overlap 3815429 3815451 GGCTTGATCCCAGCC TGCGGTAA TCT TTTCCGTA TTTTTTACCATAATA MADE_03536 3816389 - 3815676 - | FtsE MADE_03537 3818041 - 3816416 - | signal recognition particle GTPase TERM 4023 3818518 - 3818532 + G 72 -8.6 -3.76775 | CGCGGCAACAGGGGT GCATCA AGG TGATGC TTTGAATATATTAAA MADE_03538 3818129 - 3818779 + | putative methyltransferase MADE_03539 3819446 - 3818868 - | putative orphan protein TERM 4024 3819308 - 3819288 - G 73 -9.7 -3.35586 | opp_overlap 3819292, overlap 3819292 CCAAACTAAATTTAA GCAATTGCG CAG CGCACTTGC ATCACCACTTTCGGT MADE_03540 3820049 - 3819447 - | multiple antibiotic resistance (MarC)-related protein TERM 4025 3819843 - 3819821 - G 74 -5.4 -4.62561 | opp_overlap 3819823, overlap 3819823 TAAGAAACAAAATAA TACCGCCTGC TAT GCTGACGGTT TCCTGCTCAACGTTC TERM 4026 3819841 - 3819823 - G 71 -8 -3.87927 | opp_overlap 3819823, overlap 3819821 AGAAACAAAATAATA CCGCCTGC TAT GCTGACGG TTTCCTGCTCAACGT TERM 4027 3820435 - 3820448 + H 73 -2.3 -5.24531 | opp_overlap 3820435 GCTTTTGATGTAATA GCGCT CATT AGCCC TTTTTTATAGGGCGT MADE_03541 3820505 - 3820687 + | hypothetical protein TERM 4028 3820721 - 3820701 - Tf 73 -5.4 -4.5265 | gap 1, overlap 3820696 AAGTAGATGAGAAAA GC-GCGAGT TTTT ACCCGCCGC GCTTTTCAACCGTTA MADE_03542 3822100 - 3820817 - | aminopeptidase B MADE_03543 3822100 - 3822240 + | hypothetical protein TERM 4029 3822365 - 3822386 + G 82 -3 -5.52986 | CTTTACTACGCGGTA CGCTTATA AAAAGG TACAAGCG TTTTTTTGCTGACGT MADE_03544 3822334 - 3823050 + | sugar fermentation stimulation protein MADE_03545 3823262 - 3823720 + | putative DnaK suppressor protein TERM 4030 3823752 - 3823774 + F 90 -9.2 -5.10461 | opp_overlap 3823752 ATGTTAATTCAGAAA GCCTCATC CCACAAA GATGAGGC TTTTTATTAACTCCC TERM 4031 3823774 - 3823752 - f 88 -10.6 -3.97636 | opp_overlap 3823752 ATGTTAATTCAGAAA GCCTCATCCC ACA AAGATGAGGC TTTTTATTAACTCCC TERM 4032 3824579 - 3824566 - g 74 -3.7 -5.00851 | overlap 3824567 ATTAAGCAAACAAAA TCGGG CAGC CCCGG TCAACAACAGCATAC TERM 4033 3824609 - 3824623 + G 71 -3.5 -4.7416 | CCTATCGATAATATC GTGCG CGTAA TGCAC TTTTTGGGCTTTTCC MADE_03546 3823796 - 3824779 + | putative glutamyl-tRNA synthetase-relatedprotein MADE_03547 3824915 - 3824802 - | hypothetical protein TERM 4034 3826120 - 3826098 - gH 71 -9.9 -2.76453 | overlap 3826101 3826113 TGACAACGGCAAGCA GAAGGGCAT GTTAA ACGCCCTTC GCAAAAGCGAAGGTG TERM 4035 3826155 - 3826127 - gH 73 -7.4 -4.07687 | gap 2, overlap 3826113 ACGCCCTTCGCAAAA GCGAAGGTGGCGCC AAA GGCGGC-CCT-CGC AAACGCAAGCGTAAA MADE_03548 3824878 - 3826197 + | poly(A) polymerase I MADE_03549 3826190 - 3826687 + | 7,8-dihydro-6-hydroxymethylpterin- pyrophosphokinase MADE_03550 3826746 - 3827540 + | 3-methyl-2-oxobutanoate hydroxymethyltransferase MADE_03551 3827552 - 3828400 + | pantothenate synthetase TERM 4036 3828483 - 3828539 + T 100 -20 -2.62192 | gap 1, opp_overlap 3828499, overlap 3828488 3828499 CGCTTAATGACAAAA TGAAATT-AATAAAAAACGCCCGAGAC AGCA GTCTCGGGCGTTTTTTATTTGATTTAA ATTGGTTGCCTAACG TERM 4037 3828488 - 3828534 + T 100 -19.9 -3.81027 | gap 1, opp_overlap 3828499, overlap 3828483 3828499 AATGACAAAATGAAA TT-AATAAAAAACGCCCGAGAC AGCA GTCTCGGGCGTTTTTTATTTGA TTTAAATTGGTTGCC TERM 4038 3828499 - 3828522 + T 100 -18.2 -5.74086 | opp_overlap 3828499, overlap 3828488 3828483 GAAATTAATAAAAAA CGCCCGAGAC AGCA GTCTCGGGCG TTTTTTATTTGATTT TERM 4039 3828522 - 3828499 - T 100 -18.2 -5.59655 | opp_overlap 3828488 3828483 3828499 GAAATTAATAAAAAA CGCCCGAGAC AGCA GTCTCGGGCG TTTTTTATTTGATTT MADE_03552 3830243 - 3828609 - | Glutamate decarboxylase putative TERM 4040 3830358 - 3830382 + H 73 -8 -3.80858 | gap 1, overlap 3830379 TTCCTTTCAGCCATC TAGCGTGCACT TATC AGTGCA-GCTA TTTACTAGCTTATCC TERM 4041 3830614 - 3830586 - H 76 -7.3 -4.2074 | opp_overlap 3830594, overlap 3830587 GCTTTAATATACAAA CCGGCTAACCGTG GAA CTCGGTTTACCGA TAACAAGCGACCAGA MADE_03553 3830792 - 3831523 + | putative orphan protein; putative EAL domain TERM 4042 3831587 - 3831564 - T 78 -11 -3.07344 | TTATTCGCTAATAGA CGGCAGATGC CTTG GCATCTGCCT AGTGCATAAAAAAGC MADE_03554 3832285 - 3831617 - | putative methyltransferase SAM dependent TERM 4043 3832065 - 3832042 - G 74 -11 -2.82023 | opp_overlap 3832041, overlap 3832039 TATCCACACCAATCA CGCGGGCA TCGGGGTT TGCCCGCG CTATATGGGCCGTGC MADE_03555 3833100 - 3832285 - | ABC-type multidrug transport system, permease component MADE_03556 3834059 - 3833127 - | ABC transporter, ATP-binding protein TERM 4044 3833315 - 3833297 - G 72 -8.8 -3.61398 | opp_overlap 3833313, overlap 3833311 3833312 TGTGGTCGTCAATAA GCCGGTGT TCA AAACCGGC CAGTAAGCCACTGGC TERM 4045 3833313 - 3833331 + g 79 -10.3 -3.56594 | opp_overlap 3833297 3833312 3833311 CCGGTGTTCAAAACC GGCCAGT AAGCC ACTGGCC TTTGCGGCGGTTTCA TERM 4046 3834327 - 3834294 - H 76 -3.1 -5.27938 | overlap 3834295 AGGCTTAAACAAAAA CGCGCTGTGTACC GTTGGGGT AGCACACAGTGCA AAGGGTAGTTTTTTA MADE_03557 3834720 - 3835409 + | two component transcriptional regulator, winged helix family MADE_03558 3835522 - 3837690 + | putative sensor histidine kinase MADE_03559 3837973 - 3840258 + | putative outer membrane receptor for iron transport TERM 4047 3840268 - 3840293 + F 100 -17.7 -5.0916 | opp_overlap 3840253 TTTTAATGCTAGTAT GACCTAGGCAG GCAA CTGCCTAGGTC TTTTTATATTAAAAA TERM 4048 3840481 - 3840504 + G 74 -10.4 -3.18582 | gap 1, opp_overlap 3840479 GACGCCCAAGACAGT CGCGTTCAGCA GCT TGCT-AACGCG TTACTAAGTAAGCTG MADE_03560 3840331 - 3841011 + | putative hydroxylase MADE_03561 3841173 - 3841298 + | hypothetical protein MADE_03562 3841428 - 3842120 + | putative secreted protein TERM 4049 3842185 - 3842166 - T 72 -3.5 -5.15969 | CTTTAAGCTAAAAAA GCCGAAG CTTAAC CTTTGGC AACCTCGACTAGATC MADE_03563 3843352 - 3842174 - | TonB domain protein MADE_03564 3844487 - 3843405 - | hypothetical protein MADE_03565 3845812 - 3844637 - | permease TERM 4050 3844742 - 3844729 - G 79 -8.1 -4.29396 | AACCAGCGAGTAAAA CGGCA CAAA TGCCG TAAATAACTTGCACA TERM 4051 3845539 - 3845511 - G 77 -10.3 -3.46302 | opp_overlap 3845511, overlap 3845499 3845509 3845512 TAAGACACTGAAACA CTGTCTACGCCAG TTT CTGGTGTAGACAC AAGAAATGAAATGGT TERM 4052 3845538 - 3845512 - G 83 -13.8 -2.67058 | opp_overlap 3845511, overlap 3845499 3845511 3845509 AAGACACTGAAACAC TGTCTACGCCAG TTT CTGGTGTAGACA CAAGAAATGAAATGG TERM 4053 3845980 - 3845957 - R 91 -11 -4.58685 | opp_overlap 3845955 3845953, overlap 3845958 AAACGTGCGTAAAAA TGGCCAGTAC AAAT GTACTGGCCG AATGTTGACTGTCTC TERM 4054 3845979 - 3845958 - R 100 -14.5 -3.34488 | opp_overlap 3845955 3845953, overlap 3845957 AACGTGCGTAAAAAT GGCCAGTAC AAAT GTACTGGCC GAATGTTGACTGTCT MADE_03566 3847752 - 3846067 - | Carbon starvation regulatory protein TERM 4055 3846969 - 3846958 - G 79 -4.4 -5.21709 | CGGCATAGCAAAAAA TACG GCGC CGTA AAGTAAGAATAAGCC MADE_03567 3848051 - 3848548 + | membrane protein TERM 4056 3848565 - 3848590 + T 78 -10.6 -3.09516 | opp_overlap 3848561 TGAAAAATGTATAGC GTACGCATAT CTACAT ATATGCGTAC TTAGCTAGTCACAAG MADE_03568 3849618 - 3848599 - | esterase MADE_03569 3849956 - 3850843 + | GumN TERM 4057 3850898 - 3850871 - T 85 -7 -5.05116 | opp_overlap 3850876, overlap 3850876 TCAGAAACAATAAAA CTAAAGCTAGGC AAAT GCCTAGCTTTTT TATGGCGAGTAAAGG TERM 4058 3850893 - 3850876 - T 93 -11.3 -4.36716 | opp_overlap 3850876, overlap 3850871 AACAATAAAACTAAA GCTAGGC AAAT GCCTAGC TTTTTTATGGCGAGT TERM 4059 3850876 - 3850893 + T 100 -11.3 -5.24531 | opp_overlap 3850871 3850876 AACAATAAAACTAAA GCTAGGC AAAT GCCTAGC TTTTTTATGGCGAGT TERM 4060 3851037 - 3851073 + T 95 -14 -3.71998 | gap 1, opp_overlap 3851048, overlap 3851048 CGAACTAAATCGCAG GCATAAAAAAAGCGCAC CTGA GTGCGCTTTTTTTG-GC TTATGTTGCTAAGTC TERM 4061 3851063 - 3851048 - T 100 -10.4 -5.64274 | opp_overlap 3851037 3851048 GCAGGCATAAAAAAA GCGCAC CTGA GTGCGC TTTTTTTGGCTTATG TERM 4062 3851048 - 3851063 + T 100 -10.4 -5.55698 | opp_overlap 3851048, overlap 3851037 GCAGGCATAAAAAAA GCGCAC CTGA GTGCGC TTTTTTTGGCTTATG MADE_03570 3852277 - 3851093 - | elongation factor Tu TERM 4063 3852231 - 3852246 + g 72 -10.4 -2.87319 | overlap 3852217 3852230 ACGTGGCCGATTGTA CCCACG TTTA CGTGGG GTTTCGTACGTTCAA TERM 4064 3852324 - 3852301 - R 76 -7.4 -4.27316 | TTTCCTAAGTTAAAA GTCCGACCCA CCAA TAGACCGGAC CGAACCTTCATTTAG MADE_03571 3852685 - 3852341 - | elongation factor EF-2 MADE_03572 3853492 - 3852734 - | putative transcriptional acitvator, Baf family MADE_03573 3854615 - 3853629 - | putative BirA bifunctional protein TERM 4065 3854241 - 3854227 - G 76 -9.2 -3.81146 | opp_overlap 3854227 3854230 GGGGCTAACCAAGAA CGGCCG TGG CGACCG CGCCCATCGGTTTGA TERM 4066 3854261 - 3854280 + g 79 -9.2 -4.14472 | opp_overlap 3854270 CATCGGTTTGAATTT CGGCGAAG ACGA CATCGCCG TTTTCAAGATCTTCC MADE_03574 3855694 - 3854612 - | UDP-N-acetylenolpyruvoylglucosamine reductase (UDP-N-acetylmuramate dehydrogenase) TERM 4067 3855044 - 3855056 + g 72 -5.5 -4.45484 | TAAAACGTTTGGGTC GGGCA ACT TGCTC TTTCTTATCTCTATT TERM 4068 3855570 - 3855582 + g 71 -3.3 -4.88795 | CCTAATATGTAAACC GCGTT ATC GGCGC TTTGTTTTATTGAGT TERM 4069 3855765 - 3855754 - R 79 -5.8 -4.87133 | overlap 3855763 AGGGCCCAAATAAAA GCGT AAAG ACGC AATAATATTAGCGGT MADE_03575 3857364 - 3855787 - | methyl-accepting chemotaxis protein TERM 4070 3857220 - 3857231 + g 74 -5.8 -4.64676 | ACGCATTCGTTTTTC CGCT GCCT AGCG TTTTATTAAAAATGA TERM 4071 3857474 - 3857489 + H 89 -11.8 -3.78775 | opp_overlap 3857474 GCAGAAAGCAAAAAA CCCGCC GTTA GGCGGG TTTAGTGGTGCAAAA TERM 4072 3857489 - 3857474 - H 100 -11.8 -5.42514 | opp_overlap 3857474 GCAGAAAGCAAAAAA CCCGCC GTTA GGCGGG TTTAGTGGTGCAAAA TERM 4073 3857621 - 3857600 - H 100 -14.5 -4.8622 | opp_overlap 3857600 CTTCCTAACGAAAAA GCCCTTGTC GTAA GACAAGGGC TTTTCGAAATAAGGA TERM 4074 3857600 - 3857621 + H 100 -14.5 -4.11216 | opp_overlap 3857600 CTTCCTAACGAAAAA GCCCTTGTC GTAA GACAAGGGC TTTTCGAAATAAGGA MADE_03576 3857714 - 3857905 + | RNA-binding protein TERM 4075 3859497 - 3859515 + F 74 -8.9 -3.54743 | overlap 3859488 CTTGGTCTTCCGGCG TGGGAGT TTTTC ACTCCCA TTATCGTTACTCATG TERM 4076 3860285 - 3860297 + F 85 -9.1 -4.2354 | AGGTTCTATTTCACT CCCCT CAC AGGGG TTCTTTTCGCCTTTC TERM 4077 3861055 - 3861017 - f 100 -9.8 -5.44119 | opp_overlap 3861016 3861017 CTCAGGGTAAAAAAA CCTAATCAATGCTTACTG AAA CAGTAAATATTCATTAGG ATTTCGGGTCCAACG TERM 4078 3861017 - 3861055 + F 71 -9.8 -2.75844 | opp_overlap 3861017, overlap 3861016 CTCAGGGTAAAAAAA CCTAATCAATGCTTACTG AAA CAGTAAATATTCATTAGG ATTTCGGGTCCAACG TERM 4079 3863055 - 3863067 + F 100 -4.1 -6.11019 | CGATGAGAAAGATCA GCAGT TAA ATTGC TTTTTTTTGCTTTTT MADE_03577 3863248 - 3863712 + | RNA-binding protein TERM 4080 3863757 - 3863734 - T 79 -5.3 -5.08824 | gap 2, opp_overlap 3863717 3863734 TTCGCATGTAAAAAA GCCCGGTTAGC ATTT GCT--CCGGGC TTTTTCATATGAGGA TERM 4081 3863734 - 3863757 + T 74 -5.3 -4.8048 | gap 2, opp_overlap 3863734, overlap 3863717 TTCGCATGTAAAAAA GCCCGGTTAGC ATTT GCT--CCGGGC TTTTTCATATGAGGA MADE_03578 3865102 - 3863777 - | putative orphan protein TERM 4082 3865492 - 3865468 - g 70 -2.2 -4.95484 | GATCAGGAAACAAAA GAAAAATATC GCGTA GATAGTTTCC CTCCCGCGTGCAAAA TERM 4083 3865698 - 3865682 - g 71 -7.3 -4.10453 | CAAAGTCTCTTAAAA GTACGTT GGA AACGCAC TTCCCGAAAGTGAAT MADE_03579 3865255 - 3866364 + | tRNA (uracil-5-)-methyltransferase TERM 4084 3866347 - 3866376 + T 100 -13.8 -4.24948 | GAGGCAGGTGTTTTA CTTACACGCAAA GGCTAG TTTGCGTGTAAG TTTTCAGTATCATAA MADE_03580 3867007 - 3866414 - | putative transcriptional regulator, TetR family protein MADE_03581 3867349 - 3868476 + | hypothetical putative delta-9 fatty acid desaturase TERM 4085 3868511 - 3868534 + F 100 -10.4 -6.00086 | opp_overlap 3868511 TAAGTTTTGGAAAAA CCACATAAGT GCCT GCTTATGTGG TTTTTTTTATCCTAT TERM 4086 3868534 - 3868511 - f 91 -9.7 -4.58283 | opp_overlap 3868511 TAAGTTTTGGAAAAA CCACATAAG TGCCTG CTTATGTGG TTTTTTTTATCCTAT MADE_03582 3868681 - 3870102 + | soluble pyridine nucleotide transhydrogenase TERM 4087 3870136 - 3870116 - T 100 -14 -5.30686 | opp_overlap 3870116 AACAGGCACAAAAAA GCCGGCGA AATTG TCGCCGGC TTATATGCGTTAACT TERM 4088 3870116 - 3870136 + T 95 -14 -3.55368 | opp_overlap 3870116 AACAGGCACAAAAAA GCCGGCGA AATTG TCGCCGGC TTATATGCGTTAACT MADE_03583 3870462 - 3870157 - | soluble pyridine nucleotide transhydrogenase TERM 4089 3870890 - 3870870 - g 100 -8.9 -4.96848 | CCCGGGATACAAAAA CGGTGCGGA TGC TCCACCCCG AAAAGAGTGCGCGCC MADE_03584 3870577 - 3871164 + | uracil-DNA glycosylase TERM 4090 3871192 - 3871182 - T 79 -6.8 -4.56597 | overlap 3871190 GTGGTTCTCTAAAAA CGCT AAA AGCG CGTCAAACGGCATGG MADE_03585 3873386 - 3871161 - | response regulator/GGDEF/EAL domain protein TERM 4091 3873582 - 3873570 - g 72 -2.6 -4.91459 | CAAGAGGTAGAAAAA CCAC GGCAA GCGG GAAATGACAGCGCCA MADE_03586 3873528 - 3874433 + | hypothetical protein MADE_03587 3875176 - 3874430 - | phosphoadenosine phosphosulfate reductase TERM 4092 3874893 - 3874920 + g 71 -7.8 -3.85817 | opp_overlap 3874900, overlap 3874894 TTTAGGTTTAGCTTT TCTACAAGCTCA TCAA TGAACTTGTAGG TTTCTGGGAACAGAT TERM 4093 3874972 - 3874954 - G 73 -11 -2.72661 | overlap 3874957 CAGTATCGGTAAGCA CAACCGGA ATA TCCGGCTG TACCTGCGTAAGCAT TERM 4094 3874969 - 3874957 - G 72 -9.1 -3.51329 | overlap 3874954 TATCGGTAAGCACAA CCGGA ATA TCCGG CTGTACCTGCGTAAG MADE_03588 3876887 - 3875166 - | putative sulfite reductase (NADPH) hemoprotein beta-component TERM 4095 3876289 - 3876299 + g 74 -5.4 -4.61231 | TCAACAGGCTTTTCG GTTG TTT CAAC TTTTTCGCCGTCTAG MADE_03589 3878713 - 3876887 - | sulfite reductase, alpha subunit (flavoprotein) TERM 4096 3877875 - 3877855 - G 73 -7.5 -4.06502 | opp_overlap 3877857, overlap 3877857 CATTTTTAAACCAAA CACCAAGCG CAT CGCCTGGTT GGTAAGTAATGCCGC TERM 4097 3877873 - 3877857 - G 75 -10.1 -3.62354 | opp_overlap 3877857, overlap 3877855 TTTTTAAACCAAACA CCAAGCG CAT CGCCTGG TTGGTAAGTAATGCC TERM 4098 3877935 - 3877947 + g 76 -4.1 -5.03314 | opp_overlap 3877935 ATGTCTTTGATTGAA TCACG CCC TGTGA TTTTTTGAGACTCAA MADE_03590 3878854 - 3878720 - | hypothetical protein TERM 4099 3878890 - 3878862 - R 100 -15.4 -4.3586 | gap 1, opp_overlap 3878862 TTACTCATAGCAAAA GGGCGTGAACTGC AAAA GCAGT-CACGCCC TTTAAAATCAATACC TERM 4100 3878862 - 3878890 + r 100 -15.4 -3.61178 | gap 1, opp_overlap 3878862 TTACTCATAGCAAAA GGGCGTGAACTGC AAAA GCAGT-CACGCCC TTTAAAATCAATACC MADE_03591 3879667 - 3878912 - | hypothetical protein MADE_03592 3880663 - 3879671 - | hypothetical protein TERM 4101 3880626 - 3880615 - G 76 -2.2 -5.31072 | opp_overlap 3880621, overlap 3880623 AGAACAGAAGAAAAA TCAC CACA GCGA CAATCGCTATCCGTT MADE_03593 3881182 - 3880820 - | hypothetical protein TERM 4102 3880971 - 3880958 - G 71 -3.8 -4.86939 | TAATAAAGCTAAAAA CCCT GCGCTT AGGG CTAATAGTATTGTTC TERM 4103 3881108 - 3881077 - G 73 -8 -4.11484 | CCCAAGGGCTTAAAA GCTGGTCAGACATA ATAA TATGCATGCCCAGC CAGCTATCAACTAAG MADE_03594 3881394 - 3881182 - | phage shock protein C TERM 4104 3881436 - 3881459 + r 86 -11 -3.92746 | opp_overlap 3881440, overlap 3881434 3881437 ACGGGGCGGCGGTAC TCAAGGTCGC TTAA GCGACCTTGC TCTTTTTAAGCTCAG TERM 4105 3881437 - 3881458 + r 95 -14.5 -2.95166 | opp_overlap 3881440, overlap 3881436 3881434 CGGGGCGGCGGTACT CAAGGTCGC TTAA GCGACCTTG CTCTTTTTAAGCTCA TERM 4106 3881455 - 3881440 - R 75 -10.4 -3.05384 | opp_overlap 3881437 3881436 3881434 GGCGGCGGTACTCAA GGTCGC TTAA GCGACC TTGCTCTTTTTAAGC MADE_03595 3882114 - 3881446 - | phage shock protein A TERM 4107 3881664 - 3881683 + g 79 -2.8 -5.27477 | overlap 3881655 3881654 3881652 3881668 CCGCTTGCTTAACTT TTAAGCGT GTTT GCGCTGAA TTTTTTCGTTGAACT TERM 4108 3882412 - 3882425 + r 72 -9.5 -3.08992 | opp_overlap 3882412 ACAGGTACAAAAAAA GCGCC CTAT GGCGC TCTCTTAAACTAAGT TERM 4109 3882425 - 3882412 - R 100 -9.5 -5.65177 | opp_overlap 3882412 ACAGGTACAAAAAAA GCGCC CTAT GGCGC TCTCTTAAACTAAGT MADE_03596 3882692 - 3882447 - | major facilitator superfamily MFS_1 TERM 4110 3882612 - 3882624 + g 76 -9.1 -3.737 | AATTTCTTGCGTTGT TGCGG CTA CCGCA TTTGATACAACATTG TERM 4111 3882858 - 3882875 + r 73 -8.3 -3.68222 | opp_overlap 3882858 AAACTAAATAAAAAA GCCCGCC ATAA GGCGAGC TTCTTAAAATTGAAC TERM 4112 3882875 - 3882858 - R 100 -10.5 -5.74086 | opp_overlap 3882858 AAACTAAATAAAAAA GCCCGCC ATAA GGCGAGC TTCTTAAAATTGAAC MADE_03597 3883970 - 3882924 - | tRNA-dihydrouridine synthase A TERM 4113 3883619 - 3883632 + g 73 -2.3 -5.1675 | GCGCCATTAAACACG CGCCA AAGC TGCCG TTTTTTACTCGGTCA TERM 4114 3884012 - 3883994 - H 72 -9.6 -3.02371 | opp_overlap 3883993, overlap 3883998 TTCCTCAAATAATCA CCAATGCC AAA AGCATTGG ACTTTTCACGGTTTT MADE_03598 3884050 - 3885192 + | site-specific recombinase, phage integrase family protein TERM 4115 3885446 - 3885426 - g 78 -5.4 -4.74504 | AGTCCAAGTCAAAAA CTTTCGCT AGCAG AGCGGAAG CAGAAGCTTGGGCAG MADE_03599 3885317 - 3886216 + | site-specific recombinase, phage integrase MADE_03600 3886291 - 3887700 + | transposase and inactivated derivative TERM 4116 3888171 - 3888189 + T 100 -14.6 -3.93673 | opp_overlap 3888171 AGTCGTAAACAAGAA GGTGTGGC ATT GCCACACC TTTGTGCGCTATTTA TERM 4117 3888189 - 3888171 - T 100 -14.6 -4.08958 | opp_overlap 3888171 AGTCGTAAACAAGAA GGTGTGGC ATT GCCACACC TTTGTGCGCTATTTA MADE_03601 3889844 - 3888198 - | funZ protein TERM 4118 3888323 - 3888310 - G 76 -5.3 -4.8667 | GATAGGTTAGAAAAA TTTCG ATCT CGAAA ACTCCAGTGAATGAA TERM 4119 3889715 - 3889736 + g 76 -8.9 -3.65693 | opp_overlap 3889715 3889720, overlap 3889720 CATAGTTGTCAGAGA GAAAAGTTT TAGT AAACTTTTC TTTGAACTCTCTCCT MADE_03602 3890719 - 3889949 - | hypothetical protein MADE_03603 3890931 - 3891206 + | hypothetical protein TERM 4120 3891302 - 3891284 - T 90 -8.8 -5.0538 | opp_overlap 3891282 CTTTAGGCTAAAAAA TGCCCGTA CTT TGCGGGCA AAATTTTGAGGACAT MADE_03604 3891449 - 3891330 - | hypothetical protein MADE_03605 3891814 - 3891443 - | hypothetical protein MADE_03606 3892692 - 3893591 + | putative orphan protein TERM 4121 3893621 - 3893604 - T 100 -11.3 -5.59879 | TAGAAATAGAAAAAA GAGCACC ATTG GGTGCTC TAAATAATTACTTCT TERM 4122 3893931 - 3893959 + T 76 -7.3 -4.24294 | opp_overlap 3893936, overlap 3893934 3893952 GGAAAATTATGGCGA TAAAAGCGGGCAC TAA GTGCCCGCAATAA TTTTGCGTCATTCAT TERM 4123 3893934 - 3893956 + T 70 -9 -3.12324 | opp_overlap 3893936, overlap 3893931 3893952 AAATTATGGCGATAA AAGCGGGCAC TAA GTGCCCGCAA TAATTTTGCGTCATT TERM 4124 3893954 - 3893936 - T 100 -16 -4.3898 | opp_overlap 3893934 3893931 3893952 ATTATGGCGATAAAA GCGGGCAC TAA GTGCCCGC AATAATTTTGCGTCA MADE_03607 3894230 - 3893967 - | hypothetical protein TERM 4125 3894301 - 3894320 + r 95 -6.4 -5.63857 | opp_overlap 3894301, overlap 3894293 TAGACAAAAGAAAAA GCAAGCAT CGAA ATGCCTGC TTTTTTTCCATTTTT TERM 4126 3894320 - 3894301 - R 100 -8.6 -5.58522 | opp_overlap 3894301 3894293 TAGACAAAAGAAAAA GCAAGCAT CGAA ATGCCTGC TTTTTTTCCATTTTT MADE_03608 3895443 - 3894613 - | hypothetical protein MADE_03609 3898892 - 3895467 - | Type I site-specific restriction-modification system, R (restriction) subunit and related helicase TERM 4127 3896465 - 3896475 + g 81 -8.2 -4.5538 | overlap 3896464 TGTCCAGATTCATAC CCGC TAC GCGG TTTTGTAAATTTTCT TERM 4128 3896505 - 3896531 + g 79 -10.8 -3.54177 | overlap 3896503 TACCAGTGAGCGTTG CAGTTCTGCCCC GTC GGTGCCGAACTG TTCATTGCTTTTCAG TERM 4129 3897600 - 3897614 + g 72 -5 -4.59212 | overlap 3897596 CGATGTTTTGGGCAA GAGTTT AGA GAACTC TTTCTTTGCTTGATT TERM 4130 3898159 - 3898187 + g 74 -6 -4.67982 | overlap 3898150 3898147 TTATTGTTGGGCATT CCCAATACTTTG AATTC CACGGTGTTGGG TTTTGTTACGTCCCA TERM 4131 3898319 - 3898331 + g 95 -7.7 -5.43866 | CAACTTTAGCTTTAT GAGCT TCC AGCTC TTTTTTTAACGCTTC MADE_03610 3899998 - 3898916 - | type I site-specific deoxyribonuclease TERM 4132 3899328 - 3899342 + g 70 -10 -3.09272 | opp_overlap 3899326 3899320 GTCATAAGAACATCC CCAGCT TTC AGCTGG TACTTTTCAAAATCT MADE_03611 3901716 - 3900070 - | Type I restriction-modification system methyltransferase subunit TERM 4133 3901522 - 3901534 + g 83 -9.1 -4.37198 | overlap 3901523 3901530 GCTGTCTTGCTCAGT GCCGA AAA TCGGC TTTTCGATTTCGGTT MADE_03612 3902909 - 3901794 - | Plasmid maintenance system antidote protein MADE_03613 3903447 - 3903620 + | hypothetical protein TERM 4134 3903617 - 3903638 + F 86 -10.3 -4.05747 | opp_overlap 3903617 CGTAAGGAAAGAAAA GTAGATGAA TTAT TTCATCTAC TTTCTCTGAAGTGTG TERM 4135 3903638 - 3903617 - f 93 -10.3 -4.99947 | opp_overlap 3903617 CGTAAGGAAAGAAAA GTAGATGAA TTAT TTCATCTAC TTTCTCTGAAGTGTG TERM 4136 3903830 - 3903844 + F 70 -8.6 -3.3039 | CTCAACTCAAACGGC TACTCG TAA CGAGTA TTAGCTTAATTTTTA TERM 4137 3904284 - 3904255 - g 77 -9.3 -3.97444 | ATAGCAGTAAGCAAA TCAGGTTTGGCAC TTTA GTGTCAGACCTGA CCCTTCGGGGCAACA TERM 4138 3904459 - 3904449 - g 71 -6.8 -4.16016 | opp_overlap 3904449 3904456 TCATTTTCGAACAAA CCAC GCA GTGG TTATACTGACTACTA TERM 4139 3905086 - 3905046 - g 71 -6.9 -4.05446 | overlap 3905050 GTTGCTAATGACAAA TTAACAGGCATCCTAAGGA CAA CCCTCAGTACACCTGATAA AAATTCCCATGTTGA MADE_03614 3904128 - 3905306 + | uba/thif-type NAD/fad binding fold protein TERM 4140 3905421 - 3905406 - T 73 -5.4 -4.56775 | ATGTGGTTGTAAAAA CGAAGT TGTA ACTCCG CTAAGTCCGTCAGAC TERM 4141 3905697 - 3905668 - T 75 -7.9 -4.09685 | opp_overlap 3905669 3905670 3905673, overlap 3905670 3905673 TGTTAGTTTGTAAAA GATAAGCAACTCC AGTA GGAGTTGCTTAGT TTTATTTGAGAAGCT TERM 4142 3905669 - 3905696 + T 95 -11.4 -4.86731 | opp_overlap 3905668 3905670 3905673, overlap 3905670 3905673 GTTAGTTTGTAAAAG ATAAGCAACTCC AGTA GGAGTTGCTTAG TTTTATTTGAGAAGC TERM 4143 3905670 - 3905695 + T 100 -14.9 -3.51557 | opp_overlap 3905668 3905670 3905673, overlap 3905669 3905673 TTAGTTTGTAAAAGA TAAGCAACTCC AGTA GGAGTTGCTTA GTTTTATTTGAGAAG TERM 4144 3905695 - 3905670 - T 100 -14.9 -3.64716 | opp_overlap 3905670 3905669 3905673, overlap 3905668 3905673 TTAGTTTGTAAAAGA TAAGCAACTCC AGTA GGAGTTGCTTA GTTTTATTTGAGAAG TERM 4145 3905673 - 3905692 + T 91 -12.2 -3.88331 | opp_overlap 3905670 3905668 3905673, overlap 3905670 3905669 GTTTGTAAAAGATAA GCAACTCC AGTA GGAGTTGC TTAGTTTTATTTGAG TERM 4146 3905692 - 3905673 - T 91 -12.2 -3.95435 | opp_overlap 3905673 3905670 3905669, overlap 3905670 3905668 GTTTGTAAAAGATAA GCAACTCC AGTA GGAGTTGC TTAGTTTTATTTGAG MADE_03615 3905833 - 3905699 - | putative orphan protein MADE_03616 3906398 - 3906144 - | hypothetical protein TERM 4147 3906893 - 3906917 + H 86 -10.8 -3.91897 | opp_overlap 3906897, overlap 3906897 AAGACTTTGAACTAC TGAAGCCAGC TTTTC GCTGGCTTTA TTTATACCTAACAGG TERM 4148 3906897 - 3906913 + H 91 -9.4 -4.57482 | opp_overlap 3906897, overlap 3906893 CTTTGAACTACTGAA GCCAGC TTTTC GCTGGC TTTATTTATACCTAA TERM 4149 3906913 - 3906897 - H 73 -9.4 -3.13164 | opp_overlap 3906897 3906893 CTTTGAACTACTGAA GCCAGC TTTTC GCTGGC TTTATTTATACCTAA MADE_03617 3907250 - 3907795 + | hypothetical protein TERM 4150 3907925 - 3907941 + T 90 -12.3 -3.55548 | opp_overlap 3907925 CTTGCTGTATGAAAA GGGAAGC TTA GCTTCCC TTTCAACAACTATTA TERM 4151 3907941 - 3907925 - T 100 -12.3 -4.25104 | opp_overlap 3907925 CTTGCTGTATGAAAA GGGAAGC TTA GCTTCCC TTTCAACAACTATTA MADE_03618 3908091 - 3907954 - | hypothetical protein MADE_03619 3908228 - 3908091 - | hypothetical protein TERM 4152 3909006 - 3908991 - g 79 -4 -5.22039 | TCCAAATTCAAAAAA GAATAC GAGC GTATCC ACCATGAGGGCAAGA MADE_03620 3908307 - 3909437 + | hypothetical protein TERM 4153 3910100 - 3910089 - T 75 -5.8 -4.7254 | opp_overlap 3910089 ATGTTCGAGGAAAAA GAGC GATA GCTC TTACTAAACTTTCTA MADE_03621 3910572 - 3910324 - | hypothetical protein MADE_03622 3911444 - 3910758 - | hypothetical protein MADE_03623 3911727 - 3912317 + | hypothetical protein MADE_03624 3912321 - 3914084 + | OmpA/MotB MADE_03625 3914100 - 3914585 + | small GTP-binding protein MADE_03626 3914595 - 3916715 + | sensory box-containing diguanylate cyclase, putative TERM 4154 3916797 - 3916763 - T 100 -13.7 -5.72622 | gap 1, opp_overlap 3916763 3916771 TCTACAAATAAAAAA GCCGAAG-ACCGCGAT TTAC ATCGCCGTTCTTCGGC TTTCCACATTCGAAA TERM 4155 3916763 - 3916797 + T 95 -13.7 -3.60792 | gap 1, opp_overlap 3916763, overlap 3916771 TCTACAAATAAAAAA GCCGAAG-ACCGCGAT TTAC ATCGCCGTTCTTCGGC TTTCCACATTCGAAA MADE_03627 3917660 - 3916818 - | Carboxylesterase TERM 4156 3917893 - 3917907 + G 74 -7 -4.28187 | TAAACTCATCCCTAT CGCCCC GTG GCGGCG TTTCATTTCTTATTT MADE_03628 3917774 - 3918688 + | Acyltransferase family protein (Phospholipid/glycerol acyltransferase) MADE_03629 3918685 - 3919578 + | phospholipid/glycerol acyltransferase TERM 4157 3920484 - 3920468 - g 74 -5.9 -4.56775 | opp_overlap 3920468 ACCGCTTTTCAAAAA TTCGTTA TAT CAACGAA TATATCGATAAAAAG TERM 4158 3920805 - 3920824 + G 76 -8.6 -4.07568 | gap 1 CCTACGCGCCTACCA GCGAGACGG TCA CC-TCTCGC TTTTAGCCCACCGCG MADE_03630 3919582 - 3921012 + | mechanosensitive ion channel TERM 4159 3921070 - 3921035 - T 77 -10.6 -2.87881 | opp_overlap 3921045, overlap 3921024 3921045 TAACTGTTTTACAGA CGTAAAAAAACCGGCT TTGA AGCCGGTTTTTTCATA ACGCTTTTTGCTTAA TERM 4160 3921045 - 3921060 + T 93 -10.4 -5.14965 | opp_overlap 3921045 3921035 ACAGACGTAAAAAAA CCGGCT TTGA AGCCGG TTTTTTCATAACGCT TERM 4161 3921060 - 3921045 - T 100 -10.4 -5.51402 | opp_overlap 3921045, overlap 3921035 ACAGACGTAAAAAAA CCGGCT TTGA AGCCGG TTTTTTCATAACGCT MADE_03631 3921273 - 3921082 - | hypothetical protein TERM 4162 3921376 - 3921392 + H 73 -5.9 -4.57503 | opp_overlap 3921386 AGGCATAAATTGATC TTAGTCA AAA TGGCTAA TTTATTATTATATTC MADE_03632 3921609 - 3922421 + | putative secreted protein TERM 4163 3922457 - 3922485 + F 93 -10.3 -5.02074 | opp_overlap 3922457 ATTAACATCTATAAA GCCAATGATGGGT AAC GCCCATAGTTGGC TTTTTTCGCAAGTCC TERM 4164 3922485 - 3922457 - f 73 -7.4 -3.98172 | opp_overlap 3922457 ATTAACATCTATAAA GCCAATGATGGG TAACG CCCATAGTTGGC TTTTTTCGCAAGTCC MADE_03633 3922652 - 3923464 + | hypothetical enzyme of sugar metabolism TERM 4165 3923477 - 3923502 + T 93 -8.9 -5.31519 | opp_overlap 3923477 TAAATCAATAAAAAA CGGCAAGCCCG TTAC CAAGCTTGCCG TTTTTGTTTAGATGT TERM 4166 3923502 - 3923477 - T 100 -13.3 -5.59655 | opp_overlap 3923477 TAAATCAATAAAAAA CGGCAAGCCCG TTAC CAAGCTTGCCG TTTTTGTTTAGATGT MADE_03634 3924954 - 3923533 - | putative sodium-dependent transporter TERM 4167 3924441 - 3924453 + g 72 -4.7 -4.68424 | opp_overlap 3924430 3924441, overlap 3924431 3924434 3924433 AGAGTGCTGGCATAA GCAGC TTT GCCGC TTTTTCGATGCCTTC TERM 4168 3924644 - 3924621 - G 71 -3.8 -4.7889 | overlap 3924622 ACAAATAGCCAAAAA GCCACACGGT GATA ACCATGTAGA AAACGGCAATCATGA MADE_03635 3925017 - 3925166 + | hypothetical protein MADE_03636 3925948 - 3925223 - | oxidoreductase, short-chain dehydrogenase/reductase family protein TERM 4169 3925374 - 3925362 - G 73 -7.7 -4.08394 | opp_overlap 3925351 ACATTCTTTTGAAAA GGCTT TGA AAGCC CGGTATCAACGGTGC TERM 4170 3925726 - 3925707 - G 76 -4.2 -5.08824 | overlap 3925708 TCGTTATGCAAAAAA CCCGTGGT TATC ACCACAGC GCTTATCACTACCCC MADE_03637 3926333 - 3925938 - | Potential redox protein TERM 4171 3926235 - 3926224 - G 79 -4.4 -5.10767 | TAGCGAATAGAAAAA TCAG GCGA CTGA ATATCAACCAGCGTT MADE_03638 3926595 - 3927140 + | peptide methionine sulfoxide reductase MsrA TERM 4172 3927209 - 3927185 - T 85 -2.9 -5.7946 | opp_overlap 3927185 GTTTTAATAAAAAAA GGTTGCT TTATTGGTGCT AGCAACC TTTTTTATGTGTCAG TERM 4173 3927185 - 3927209 + T 78 -2.9 -5.4251 | opp_overlap 3927185 GTTTTAATAAAAAAA GGTTGCT TTATTGGTGCT AGCAACC TTTTTTATGTGTCAG MADE_03639 3928359 - 3927238 - | hypothetical protein MADE_03640 3928641 - 3929342 + | hypothetical protein TERM 4174 3930420 - 3930406 - g 74 -3.5 -4.98522 | AATTTCACATAAAAA CACCG ATGTG CAGTG CAAGGCTTTGTTGAG MADE_03641 3929366 - 3930478 + | peptide methionine sulfoxide reductase MADE_03642 3930496 - 3931032 + | flavodoxin MADE_03643 3931058 - 3931846 + | hypothetical protein TERM 4175 3931838 - 3931850 + F 74 -6.3 -4.43909 | opp_overlap 3931838, overlap 3931835 GCTATTTCACGCAAA CAAAC CTA GTTTG TTGTTTTATTACCGT TERM 4176 3932044 - 3932003 - g 100 -8.7 -5.83211 | gap 1, opp_overlap 3932008 3932041, overlap 3932006 3932021 GATGAAAAGAAAAAA GCA-TACCTCGGCTCAAGAC GAG GCCTTGGGCCGCGCTATTGC CATAAACGGCAGTAC TERM 4177 3932040 - 3932006 - g 72 -9.2 -3.59406 | opp_overlap 3932008, overlap 3932003 3932021 GAAAAGAAAAAAGCA TACCTCGGCTCAAGAC GAG GCCTTGGGCCGCGCTA TTGCCATAAACGGCA MADE_03644 3931955 - 3932071 + | hypothetical protein MADE_03645 3932162 - 3932767 + | aminoglycoside phosphotransferase TERM 4178 3932772 - 3932756 - f 71 -6.5 -4.2558 | opp_overlap 3932757, overlap 3932757 GAGCCTTCATTAAAA TTGGGCT ATT AGCCCAT TTAACACGTGCTTTT TERM 4179 3932757 - 3932771 + F 79 -10 -3.56836 | opp_overlap 3932756 3932757 AGCCTTCATTAAAAT TGGGCT ATT AGCCCA TTTAACACGTGCTTT TERM 4180 3932771 - 3932757 - f 75 -10 -3.15027 | opp_overlap 3932757, overlap 3932756 AGCCTTCATTAAAAT TGGGCT ATT AGCCCA TTTAACACGTGCTTT MADE_03646 3932989 - 3933147 + | hypothetical protein TERM 4181 3933261 - 3933245 - g 76 -7.9 -4.2008 | opp_overlap 3933244 3933243 ACATATTTTAATAAA GCAGCGC TAA GTGCTGC GGTTCTCTCGTGCTT TERM 4182 3933592 - 3933566 - g 73 -10.8 -3.0127 | opp_overlap 3933569 GTATCTAACGATATA GGCCAAGGCAGC CTG GTTGACTTGGCC CACTTAACCAGCGCC TERM 4183 3935108 - 3935122 + G 74 -11.4 -2.8585 | opp_overlap 3935110, overlap 3935107 3935110 GGCTACGCCGGTCAA GAGCGC CGG GCGCTC CTTTCAGTTAACTAC MADE_03647 3933224 - 3935146 + | TonB-dependent receptor TERM 4184 3935175 - 3935195 + F 100 -10.5 -5.45813 | opp_overlap 3935175 CGGCACAAGTATAAA GGCTATATC CAC GGTATAGCC TTTTATTTTTTGCTA TERM 4185 3935195 - 3935175 - f 79 -8.3 -4.1021 | opp_overlap 3935175 CGGCACAAGTATAAA GGCTATATC CAC GGTATAGCC TTTTATTTTTTGCTA TERM 4186 3935270 - 3935256 - f 71 -6.4 -4.18762 | opp_overlap 3935256, overlap 3935263 3935267 AAGCGCGATTGAAAA CACGTA AGC CACGTG TCATGTTGCCACGTG MADE_03648 3935581 - 3936213 + | thiol:disulfide interchange protein DsbA TERM 4187 3936267 - 3936250 - f 83 -12.7 -2.8335 | opp_overlap 3936250, overlap 3936247 3936245 3936243 CAATTAAACACATTA TGGGCGC TTAA GCGCCCA TTTTTATGTCTTGGA TERM 4188 3936250 - 3936267 + F 100 -12.7 -5.10064 | opp_overlap 3936250 3936247 3936245 3936243 CAATTAAACACATTA TGGGCGC TTAA GCGCCCA TTTTTATGTCTTGGA MADE_03649 3936290 - 3936880 + | predicted hydrolase MADE_03650 3938118 - 3936970 - | putative lipoprotein TERM 4189 3937635 - 3937619 - Gf 73 -8.7 -3.63627 | TCGTTAGAGTCCAAA TCTGCCG CTT CGGCAAA GATGCGATTGCGTTT MADE_03651 3938117 - 3938269 + | hypothetical protein TERM 4190 3938282 - 3938300 + Tr 80 -10.3 -3.65046 | TAGTTAAAATGCGTG GGCGGTA AGGTA TACCGCC TTATTCAGATGCCGG TERM 4191 3938305 - 3938335 + Tr 93 -8.4 -5.28755 | GGTATACCGCCTTAT TCAGATGCCG GCAGTGCTAAG CGGCATCTGA TTTTTTAGTGTCTTT MADE_03652 3939208 - 3938321 - | nitrate transport ATP-binding subunits C and D TERM 4192 3938408 - 3938421 + g 79 -8.1 -4.21885 | AGCAGAGTGCTTAGT CCGTG AAGG CACGG TTTCTACTTTCTTCT MADE_03653 3940274 - 3939225 - | putative nitrate ABC transporter, permease protein MADE_03654 3941719 - 3940310 - | ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component TERM 4193 3941784 - 3941746 - R 100 -6.9 -6.23209 | gap 3, opp_overlap 3941746 3941745 GTAACCAAAAAAAAA CCCACCA-GCTATCGACG TAATAC CGTCGA--GCATGGTGGG CTTCGTTGCCGTGTT TERM 4194 3942204 - 3942246 + r 70 -9.3 -3.11727 | overlap 3942203 3942206 CAAAAAAGGGGGTAC TG-TTCAACGGTGGTGCGTGT GAT ACGCGT-CCACCGCTGAATCA TGTGTTGGCCTTGTT TERM 4195 3942206 - 3942243 + r 81 -12.1 -2.76093 | gap 1, overlap 3942204 3942203 AAAAAGGGGGTACTG TTCAACGGTGGTGCGTGT GAT ACGCGT-CCACCGCTGAA TCATGTGTTGGCCTT MADE_03655 3943592 - 3942276 - | putative chemotaxis transducer TERM 4196 3942549 - 3942567 + g 72 -8.1 -3.80573 | overlap 3942541 3942550 TTGGTCGCCGGCCCG TGCCGCT TCAAT AGCGGCG TTTAATGCTAATAAG TERM 4197 3942785 - 3942775 - G 77 -6.8 -4.49756 | TGTGAAATATTAAAA GCGA CAT TCGC GGCTTCAGAAATAGC TERM 4198 3943689 - 3943671 - R 77 -11 -2.85402 | overlap 3943661 CAAATCACCACTACA GGCATGCC CGT AGCATGCC TCGGTAAGCGCAGTC MADE_03656 3944772 - 3943777 - | glycosyl transferase, family 3 MADE_03657 3945697 - 3944756 - | multifunctional protein TERM 4199 3945457 - 3945467 + g 74 -8.2 -3.84825 | opp_overlap 3945457 CTGCCTGTTGTAAGA GGCG AAG CGCC TTTAATGTAAGTAAC TERM 4200 3945587 - 3945573 - G 70 -2 -5.01732 | opp_overlap 3945574, overlap 3945574 3945575 AATTCGCTCAAAAAA CGCGAC GCC GTCGAA TTGTTCTTGGTTATG MADE_03658 3948562 - 3945734 - | nitrate reductase MADE_03659 3948992 - 3948621 - | putative nitrate reductase (electron transfer subunit) AND putative nitrite reductase (small subunit) TERM 4201 3949042 - 3949026 - R 86 -9.5 -4.07618 | TCTTTAATAACTAAA TCGCTAT ACC ATAGCGA CTGGAATAAACTGGT MADE_03660 3951578 - 3949029 - | nitrite reductase TERM 4202 3951529 - 3951517 - G 82 -7.7 -4.63486 | AGCTGTTCAACAAAA TGGTG CCC CACCA TGCCGTTGCCTACGA TERM 4203 3951609 - 3951636 + r 100 -15.6 -3.42274 | opp_overlap 3951609 TCGGGACAAAAAAAA GCCCGCTTCAAC TTTC GTTGATGCGGGC TTCGTTGCCTATTTT TERM 4204 3951636 - 3951609 - R 100 -15.6 -5.93809 | opp_overlap 3951609 TCGGGACAAAAAAAA GCCCGCTTCAAC TTTC GTTGATGCGGGC TTCGTTGCCTATTTT MADE_03661 3953471 - 3951906 - | Sulfate permease family protein MADE_03662 3953763 - 3953581 - | hypothetical protein MADE_03663 3953877 - 3954164 + | hypothetical protein TERM 4205 3954271 - 3954249 - gf 93 -14.2 -2.77161 | opp_overlap 3954248, overlap 3954246 AAAACGCCAACACCA GGTTGCACCA ATT TGGCGCAACC ATTCACTTCTCGCTA MADE_03664 3954137 - 3954295 + | hypothetical protein TERM 4206 3954792 - 3954806 + G 74 -7 -4.20783 | opp_overlap 3954791 3954788 GACTGATGAGATCAC CACGGG CAA CCCGCG TTTATTGAGTAGCAT TERM 4207 3955124 - 3955104 - g 89 -11.2 -4.13767 | GCGTTTATGCGAAAA GCTTGCTG CCCTT CAGCAAGC CCAAGAACATCACTT MADE_03665 3954490 - 3955830 + | nitrate-and nitrite-responsive positive regulator MADE_03666 3956532 - 3955903 - | hypothetical protein TERM 4208 3956151 - 3956170 + g 76 -4.2 -5.08824 | overlap 3956142 GCGCGTGCCCGTGAG CCAAATGC ATAC GCGCTTGG TTTTTTACCTGCCAG MADE_03667 3957227 - 3956535 - | phosphoesterase PA-phosphatase related TERM 4209 3956988 - 3957014 + g 85 -13.8 -3.03619 | opp_overlap 3956987 3956981, overlap 3956990 AACAAATATAAGCAC GGTGTTACTGCC AAG GGCGGTAACATC TCTTAACACATCGTT TERM 4210 3956990 - 3957012 + g 80 -12.8 -3.07344 | opp_overlap 3956987 3956981, overlap 3956988 CAAATATAAGCACGG TGTTACTGCC AAG GGCGGTAACA TCTCTTAACACATCG MADE_03668 3957580 - 3957260 - | BolA protein MADE_03669 3958229 - 3957588 - | alkylated DNA repair protein TERM 4211 3958935 - 3958906 - g 74 -3.5 -5.01845 | opp_overlap 3958927 3958930, overlap 3958908 3958927 CACAAGAACTAAAAA CGTCACCGGTTAA AACA TTAACCAGCGTTG AGAGCGCTAGTTTTA TERM 4212 3959248 - 3959236 - g 71 -6.9 -4.13767 | opp_overlap 3959242 3959243 GGTGGCAGTGTAAAA GCACC ATG GGCGC TGCGCTTATTATAGA MADE_03670 3958563 - 3959795 + | putative ribosomal RNA small subunit methyltransferase D MADE_03671 3959843 - 3960451 + | peptidyl-prolyl cis-trans isomerase A TERM 4213 3960530 - 3960494 - T 73 -10.4 -2.91264 | gap 1, opp_overlap 3960486 3960498, overlap 3960498 TTTTCGATTTAGATA TCAATGTGTCC-TTTTC TGGC GAAAACGGACACATTGC TTCAAGGTTTAGGTA TERM 4214 3960498 - 3960526 + T 75 -9.8 -3.36581 | gap 1, opp_overlap 3960498 3960494, overlap 3960486 CGATTTAGATATCAA TGTGTCC-TTTTC TGGC GAAAACGGACACA TTGCTTCAAGGTTTA TERM 4215 3960526 - 3960498 - T 75 -9.8 -3.32993 | gap 1, opp_overlap 3960486 3960498, overlap 3960494 CGATTTAGATATCAA TGTGTCC-TTTTC TGGC GAAAACGGACACA TTGCTTCAAGGTTTA MADE_03672 3961779 - 3960550 - | dipeptidase TERM 4216 3960906 - 3960931 + g 70 -10.4 -2.5409 | opp_overlap 3960905 3960904 TTTGCTTAAATAATT CCCCATACGC TTTCTT GCGTTTGGGG TCGCTTGGCAATTCT TERM 4217 3961321 - 3961303 - G 72 -8.1 -3.71924 | opp_overlap 3961310 GAAAGTATCTAACAA GCTGAGG TCTTC CCCCAGC GGGTAAGCATTTTCC MADE_03673 3964086 - 3961780 - | TonB-dependent receptor TERM 4218 3962792 - 3962810 + g 74 -5.8 -4.63218 | TCGTAAATAACGTCA CCGTCCGC ACT GCCGCCGG TTTTATTCAAACGCG TERM 4219 3963252 - 3963240 - G 71 -7.7 -3.98083 | opp_overlap 3963240 CATTGAAGTCATAAA CCTCA GGT TGAGG TTCGATACATCCTTC MADE_03674 3965072 - 3964548 - | Acetyltransferase, including N-acetylase of ribosomal protein TERM 4220 3964840 - 3964820 - G 72 -5.3 -4.60255 | overlap 3964809 AGAAGCGGTTAAAAA GACCGCATA CGC CAAGCGGCC GTCTAGCGTCGTTAT MADE_03675 3965766 - 3965143 - | hypothetical protein TERM 4221 3965844 - 3965824 - R 76 -6.8 -4.39571 | opp_overlap 3965824 3965820 TGTAGAAACGCAAAA GGCGGTGT GCAAT ATACCGCC TTCGTTTACTTGTGT TERM 4222 3965824 - 3965844 + r 79 -9.7 -3.64257 | opp_overlap 3965824, overlap 3965820 TGTAGAAACGCAAAA GGCGGTGTG CAA TATACCGCC TTCGTTTACTTGTGT MADE_03676 3968338 - 3965873 - | TonB-dependent receptor TERM 4223 3966058 - 3966083 + g 74 -6.9 -4.27443 | gap 1 CTAAGGTGTAGCCGT CGGTG-GTCGTT TCA AACGACGCAACG TTATTTTGCTCGTCA TERM 4224 3968356 - 3968386 + r 100 -13.6 -4.08767 | opp_overlap 3968364, overlap 3968354 GTATTCCTTGGTGGA TGTTATAACATCAT TTA GTGATGTTATAACA TTTTAAGGAAGTGAG MADE_03677 3969471 - 3968503 - | lysyl-tRNA synthetase TERM 4225 3969422 - 3969438 + g 90 -13.7 -3.322 | opp_overlap 3969407 3969417 GTGCGAAGTATTTCA GCACGGG CCA CCCGTGC TTCATGTGTCGCGGT TERM 4226 3969527 - 3969506 - R 100 -9.4 -5.49568 | opp_overlap 3969506 AAGCTAAAATAAAAA GCCGGTAC GCAAGG GCACCGGC TTTAACCTGAAACAC TERM 4227 3969561 - 3969542 - R 70 -8.6 -3.41222 | opp_overlap 3969542, overlap 3969540 CTTTAACCTGAAACA CTACGTGC CTAG GCACATAG TTATATTAGTGTTTA TERM 4228 3969613 - 3969596 - R 71 -9.9 -2.90763 | opp_overlap 3969598, overlap 3969598 TGTACACGTGACACA TACTCGC CAGA GCGAGTA TCTACGCGAATAACT MADE_03678 3970143 - 3969574 - | elongation factor P (EF-P) TERM 4229 3971117 - 3971127 + G 80 -6.8 -4.72272 | opp_overlap 3971116 3971111 AAGAAGCGATAAAGC GCCT GCC AGGC TTTTTAGTCCCCAAA MADE_03679 3970180 - 3971205 + | lysine 2,3-aminomutase YodO family protein MADE_03680 3971332 - 3971207 - | hypothetical protein TERM 4230 3971451 - 3971436 - H 100 -9 -5.73563 | AGCAAAGTAAAAAAA TGGGCA GAAT TGCCCA CCCTTACGGTATGTT MADE_03681 3971653 - 3971985 + | hypothetical protein MADE_03682 3973350 - 3972115 - | hypothetical protein MADE_03683 3974231 - 3973533 - | putative enzymatic protein TERM 4231 3974500 - 3974512 + G 71 -3.3 -4.77157 | TGTATTAGGCTTTGT GAGCG CAG CGCTG TTTTTACTGACTTGG TERM 4232 3974585 - 3974572 - g 72 -6.7 -4.25104 | opp_overlap 3974558 GTCGCGTTATCAAAA TGCGA TTAC TCGCA GCAGCAGTCTCGATG TERM 4233 3975125 - 3975146 + G 87 -10.2 -4.07618 | opp_overlap 3975125 ATGCACACACTAAAA CGCCAAGA ACAACG TCTTGGCG TTTAGTTATTCGGGC TERM 4234 3975146 - 3975125 - g 93 -10.2 -4.39568 | opp_overlap 3975125 ATGCACACACTAAAA CGCCAAGA ACAACG TCTTGGCG TTTAGTTATTCGGGC MADE_03684 3974474 - 3975151 + | hypothetical protein MADE_03685 3977078 - 3975183 - | DNA topoisomerase IV subunit B MADE_03686 3977778 - 3977197 - | predicted esterase MADE_03687 3978611 - 3977808 - | 3,5-cyclic-nucleotide phosphodiesterase TERM 4235 3978544 - 3978556 + g 70 -4.7 -4.41882 | overlap 3978537 TCGTAAGGTGCTATG CCCGC ATA GCCGG TTTCGTTTTTATCTT MADE_03688 3978958 - 3978608 - | putative cytoplasmic protein TERM 4236 3978694 - 3978705 + g 72 -5.8 -4.43012 | CCATATGCTTTTCGT TGCG TTGG CGCA TTTTAATATTGGGGT MADE_03689 3979611 - 3979045 - | ADP-ribose pyrophosphatase MADE_03690 3979968 - 3981356 + | outer membrane channel precursor protein TERM 4237 3981409 - 3981391 - f 79 -10.2 -3.54743 | opp_overlap 3981391 GATGATGAATTAGAA GGGTAGCG CAG CGCTGCCC TTTTTTGTGCGCCGC TERM 4238 3981391 - 3981409 + F 100 -12.4 -5.24129 | opp_overlap 3981391 GATGATGAATTAGAA GGGTAGCG CAG CGCTGCCC TTTTTTGTGCGCCGC TERM 4239 3982251 - 3982262 + G 75 -3 -5.1287 | CTTATGTCATGCTGC TGAT GTTT ATCA TTTTTTACATATACG MADE_03691 3981821 - 3982675 + | Kef-type K+ transport system, NAD-binding component TERM 4240 3982770 - 3982740 - T 100 -15.6 -4.60924 | opp_overlap 3982743 3982747, overlap 3982743 3982747 GAAACGCCCCAAAAA TAACAAAGGCCACT GTG AGTGGCCTTTGTTT TATAAAGTTTGGAGT TERM 4241 3982767 - 3982743 - T 100 -17.3 -4.40963 | opp_overlap 3982743 3982747, overlap 3982740 3982747 ACGCCCCAAAAATAA CAAAGGCCACT GTG AGTGGCCTTTG TTTTATAAAGTTTGG TERM 4242 3982743 - 3982767 + T 100 -17.3 -4.44974 | opp_overlap 3982743 3982740 3982747, overlap 3982747 ACGCCCCAAAAATAA CAAAGGCCACT GTG AGTGGCCTTTG TTTTATAAAGTTTGG TERM 4243 3982763 - 3982747 - T 100 -12.3 -4.76802 | opp_overlap 3982743 3982747, overlap 3982743 3982740 CCCAAAAATAACAAA GGCCACT GTG AGTGGCC TTTGTTTTATAAAGT TERM 4244 3982747 - 3982763 + T 100 -12.3 -4.77775 | opp_overlap 3982747 3982743 3982740, overlap 3982743 CCCAAAAATAACAAA GGCCACT GTG AGTGGCC TTTGTTTTATAAAGT MADE_03692 3985640 - 3982866 - | TPR domain protein TERM 4245 3983120 - 3983135 + g 72 -3.2 -5.02476 | CATCGGCATTCTCGC GCTGTA GTGA TACCGC TTTTTTGGCAAGTGT TERM 4246 3987513 - 3987476 - g 71 -8 -4.00348 | gap 2, opp_overlap 3987482, overlap 3987482 TGCGAACGAAGCAAA CATAAA-CTCGA-AGCAC ATTG GCGCTATCGAGATTTATG ATAACTTCAGTACTG TERM 4247 3987506 - 3987482 - g 77 -7.2 -4.40184 | gap 1, opp_overlap 3987482, overlap 3987476 CGAAGCAAACATAAA CTCGA-AGCAC ATTG GCGCTATCGAG ATTTATGATAACTTC MADE_03693 3985947 - 3987716 + | ATP-dependent RNA helicase TERM 4248 3987730 - 3987764 + F 80 -6.5 -4.68479 | AAATAGCAACACTTC CAGCCTTTATATAAC TAATT GCAATATGAAGGCTG TTTTCGTTGTTTTCT TERM 4249 3987789 - 3987814 + F 90 -4 -5.88197 | TTTTCTAATTAAAAA GAATTGGCGC AAAATA GTGTCAGTTC TTTTTTTGTATTTGA TERM 4250 3988233 - 3988243 + G 72 -8.2 -3.75571 | GCCATGAGCAGTGGT GGCG TTG CGCC TGTTTTACTGCGTTA MADE_03694 3987792 - 3989231 + | uroporphyrin-III C-methyltransferase MADE_03695 3989374 - 3990324 + | hypothetical protein TERM 4251 3990418 - 3990395 - T 79 -6.7 -4.60041 | opp_overlap 3990395 ATTTAGTGGGAAAAA GCGCCTTCA AATGAG TCAAGGCGC TTTTGGTATAAACCT TERM 4252 3990395 - 3990418 + T 76 -6.7 -4.3467 | opp_overlap 3990395 ATTTAGTGGGAAAAA GCGCCTTCA AATGAG TCAAGGCGC TTTTGGTATAAACCT MADE_03696 3991744 - 3990458 - | PhoH family protein MADE_03697 3994186 - 3992159 - | ABC-type sugar transport system, periplasmic component TERM 4253 3992453 - 3992473 + g 72 -6.7 -4.21631 | TCGAGTACCAGACGG GGCCGCGTA TTC TCCGCGGGC TTTCTTAAGTAAATT MADE_03698 3994374 - 3994520 + | hypothetical protein TERM 4254 3996557 - 3996545 - g 72 -5.5 -4.40358 | opp_overlap 3996551 ACGCATTTGAGAAAA CCTGC CCG ACAGG CTCTGGCGTATTCGA MADE_03699 3994681 - 3997524 + | RNA polymerase-associated protein HepA TERM 4255 3998020 - 3998040 + G 72 -9 -3.52192 | overlap 3998015 ACTGACGATGCAGCG CGCCGCTA TACCT TAGTGGCG TTATATCCCATTACA MADE_03700 3997564 - 3998280 + | pseudouridylate synthase for 23S rRNA (position 746) and tRNAphe(position 32), dual specificity MADE_03701 3998500 - 3999330 + | hypothetical protein TERM 4256 3999716 - 3999690 - g 77 -10.3 -3.36289 | opp_overlap 3999689 3999690 3999692, overlap 3999696 CATTACTGGAACGAA GAGAAACTGAC AAAAG ATCAGTTTCTC ATTGATGAACTTAAT MADE_03702 3999588 - 3999797 + | hypothetical protein TERM 4257 4000801 - 4000813 + G 71 -3.4 -4.9072 | TCGAAATTACTCAAC TGGT GGGTG ACCA TTGTTTTTTCTTTGT TERM 4258 4001002 - 4001012 + G 80 -6.8 -4.55689 | GCATGGAGTACGGTA GCGA TGG TCGC TTTTATCTCGCTGCT MADE_03703 3999895 - 4001241 + | putative muropeptide transport protein (mFS family), highly conserved in gamma-proteobacteria MADE_03704 4002247 - 4001270 - | GGDEF domain protein TERM 4259 4001477 - 4001448 - G 72 -8.5 -3.78775 | overlap 4001467 TGCTCGACCACCAAA CGCTGTGCGAGCT GACG AATTCGCTCAGCG ACAATACGCGCATCT MADE_03705 4003263 - 4002244 - | response regulator MADE_03706 4004157 - 4003324 - | thymidylate synthase TERM 4260 4003695 - 4003674 - G 71 -3.7 -4.79756 | gap 1, opp_overlap 4003674 4003685 CATAGAATTGAAAAA GCGTATGACA AGG TGGCA-ACGC CTGTTTACCCATGGC MADE_03707 4004979 - 4004176 - | prolipoprotein diacylglyceryl transferase MADE_03708 4005790 - 4004984 - | hypothetical protein TERM 4261 4005828 - 4005816 - R 72 -9.1 -3.28924 | opp_overlap 4005816 4005815 4005821 CACCTGCTCGGATAA GGCCT CCT AGGCC CTTGGTTTCAAGATA MADE_03709 4008114 - 4005796 - | phosphoenolpyruvate-protein phosphotransferase PtsP TERM 4262 4008342 - 4008374 + r 70 -2.5 -5.03145 | CGCGATACATCTTCA GCCTTGGCGTTGC GCCGTTA GCCACGCCTGCGC TTTTTTCCACGCTTA MADE_03710 4008847 - 4008359 - | dinucleoside polyphosphate hydrolase MADE_03711 4009015 - 4009692 + | methyl-directed mismatch repair MADE_03712 4010867 - 4009785 - | DNA mismatch repair protein MADE_03713 4012433 - 4010928 - | hypothetical protein TERM 4263 4012941 - 4012927 - gR 71 -7.1 -3.93963 | ATCATCAGCGAGAAA CTGGC AGAGA GCCAG AGCAGTCTGCAGACC MADE_03714 4012432 - 4013208 + | SH3, type 3 TERM 4264 4013268 - 4013232 - TR 100 -23.3 -4.20367 | opp_overlap 4013237 4013240, overlap 4013234 GCTTTTAAGAAACAA CACAACAACGCCGATGA CAA TCATCGGCGTTGTTGTA TAGGGTGTTGAGTAA TERM 4265 4013266 - 4013234 - TR 100 -23.7 -3.69841 | opp_overlap 4013237 4013240, overlap 4013232 TTTTAAGAAACAACA CAACAACGCCGATGA CAA TCATCGGCGTTGTTG TATAGGGTGTTGAGT TERM 4266 4013237 - 4013263 + Tr 100 -19.6 -3.52079 | opp_overlap 4013234 4013232, overlap 4013240 TAAGAAACAACACAA CAACGCCGATGA CAA TCATCGGCGTTG TTGTATAGGGTGTTG TERM 4267 4013240 - 4013260 + Tr 100 -15.5 -3.88946 | opp_overlap 4013234 4013232, overlap 4013237 GAAACAACACAACAA CGCCGATGA CAA TCATCGGCG TTGTTGTATAGGGTG MADE_03715 4013523 - 4013356 - | probable two-component sensor TERM 4268 4013740 - 4013709 - R 95 -13.8 -3.56594 | opp_overlap 4013714, overlap 4013714 GTAAAGTGGGCTAAA GAAAAGGGCCAGCA TAAT CGCTGGCCCTTTTT TATTTATGAATTTAC TERM 4269 4013714 - 4013735 + r 100 -13 -5.72622 | opp_overlap 4013709 4013714 GTGGGCTAAAGAAAA GGGCCAGC ATAATC GCTGGCCC TTTTTTATTTATGAA TERM 4270 4013735 - 4013714 - R 100 -13.7 -4.86731 | opp_overlap 4013714, overlap 4013709 GTGGGCTAAAGAAAA GGGCCAGCA TAAT CGCTGGCCC TTTTTTATTTATGAA MADE_03716 4017570 - 4013773 - | bifunctional putA protein TERM 4271 4015441 - 4015416 - G 70 -9.1 -3.33492 | gap 1, opp_overlap 4015415 CTACCGAGTGCATAA TATCGACTGCGC GCT GCGCAA-CGATA CTGGTTTGCTCTGCA TERM 4272 4016955 - 4016978 + g 71 -3.8 -4.73432 | opp_overlap 4016954 CTTCACCTAGCATAT CGTAAGAGTA CACA TACCCTTTCG TTTCTTTCTCTTTGG MADE_03717 4017990 - 4017838 - | hypothetical protein TERM 4273 4018791 - 4018803 + G 71 -10.5 -2.60813 | opp_overlap 4018787 4018783 4018791, overlap 4018790 4018788 GGCAAGATGAAGTGA CGCGC TTG GCGCG CTATTTCAACGAGTA TERM 4274 4018803 - 4018791 - g 71 -10.5 -2.60512 | opp_overlap 4018791 4018790 4018788, overlap 4018787 4018783 GGCAAGATGAAGTGA CGCGC TTG GCGCG CTATTTCAACGAGTA MADE_03718 4018058 - 4019680 + | putative chemotaxis sensory protein TERM 4275 4019790 - 4019756 - f 79 -11.6 -2.66964 | gap 1, opp_overlap 4019763 4019764, overlap 4019764 TTAGCGATGATACCA GCGAATAAGCTCTGG CAATGT CCAGAGCCT-TTCGC CTCCCTCCCTATACC TERM 4276 4019783 - 4019764 - f 76 -9.3 -3.70109 | opp_overlap 4019764 4019763, overlap 4019756 GATACCAGCGAATAA GCTCTGG CAATGT CCAGAGC CTTTCGCCTCCCTCC TERM 4277 4019809 - 4019825 + F 100 -12.3 -4.87803 | opp_overlap 4019809 CCTCCCTATACCGAA CGCCTAC GTT GTAGGCG TTTTATTTGACACTA TERM 4278 4019825 - 4019809 - f 85 -12.3 -3.12351 | opp_overlap 4019809 CCTCCCTATACCGAA CGCCTAC GTT GTAGGCG TTTTATTTGACACTA MADE_03719 4020094 - 4021809 + | hypothetical protein TERM 4279 4021854 - 4021874 + F 100 -12.6 -5.09426 | CATAATAGCCTACAC GCAGAGGC CTATT GCCTCTGC TTTTTTCCGCTTAAC MADE_03720 4021909 - 4022199 + | septum formation initiator family protein MADE_03721 4022196 - 4022921 + | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase MADE_03722 4022936 - 4023409 + | 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase TERM 4280 4024189 - 4024177 - g 70 -9.1 -3.41309 | opp_overlap 4024176 4024175 ACAGACGAACAGCAA GACGC CCA GCGTC GATTTGACGCTAAAG MADE_03723 4023406 - 4024491 + | Pseudouridylate synthase MADE_03724 4024570 - 4025205 + | protein-L-isoaspartate O-methyltransferase TERM 4281 4025331 - 4025343 + G 79 -10.5 -3.53012 | opp_overlap 4025326 CCTGACGTAATGCTA GCGCC AAT GGCGC TTTCGCAGCCAGAAA MADE_03725 4025229 - 4025780 + | membrane protein; member of the DedA of proteins TERM 4282 4026126 - 4026110 - g 72 -5.8 -4.39568 | overlap 4026100 4026112 AGCCACAGACCAAAA GGTCAG CAGGT CCGACC TCACCGAATGTAGAC MADE_03726 4025782 - 4026651 + | hypothetical lipoprotein NlpD TERM 4283 4026905 - 4026879 - g 73 -4.4 -4.7629 | CGACCAACCTAAAAA CCTAGATGCAAC ACA GCTTTATCTAGG CGAGATTGGATTTTC TERM 4284 4027130 - 4027140 + G 76 -8.2 -4.11216 | overlap 4027124 AGTTCGACCCTGAAC GCGG GTT CCGC TTTTCCACATACGCC TERM 4285 4027499 - 4027487 - g 70 -4.9 -4.39568 | ACTCAGACATCAAAA GTAAT ATT ATTAC CTGGCTTGAAGAACT MADE_03727 4026724 - 4027716 + | sigma S (sigma 38) factor of RNA polymerase, major sigma factor during stationary phase TERM 4286 4027800 - 4027744 - T 100 -21.2 -3.21785 | opp_overlap 4027749, overlap 4027749 TCATAAAAATGAAAC TAAAATGCCAGCGTTGCAATACCCGA TAGTC TAAGGTATCGCAACGCTGGCATTTTT TATTTTGTGCTGAAA TERM 4287 4027749 - 4027795 + T 100 -16.8 -5.86976 | opp_overlap 4027749 4027744 AAAATGAAACTAAAA TGCCAGCGTTGCAATACC CGATAGTCTAA GGTATCGCAACGCTGGCA TTTTTTATTTTGTGC TERM 4288 4027795 - 4027749 - T 100 -21.1 -4.65819 | opp_overlap 4027749, overlap 4027744 AAAATGAAACTAAAA TGCCAGCGTTGCAATACCCGA TAGTC TAAGGTATCGCAACGCTGGCA TTTTTTATTTTGTGC TERM 4289 4027829 - 4027819 - T 71 -4 -5.00616 | TTTGTGCTGAAAAAA GTTA AGC TAAC GACTCGAGTGCATTT TERM 4290 4027918 - 4027937 + T 78 -2.9 -5.52384 | CTCGACTAAGCGTGA CAAACGT ATAAGC ATGTTTG TTTTTTTCATCGGGG MADE_03728 4028398 - 4027895 - | dihydrofolate reductase type I, trimethoprim resistance TERM 4291 4028497 - 4028529 + r 73 -8.6 -3.63744 | gap 1, opp_overlap 4028502, overlap 4028502 TCGCTTCCACACAAA AAAAAGCTCGCAACT ATAA AGT-GCGAGCTTTTA TATTTTCAAAGCGAA TERM 4292 4028524 - 4028502 - R 100 -8.5 -6.02914 | gap 1, opp_overlap 4028502 4028497 TCCACACAAAAAAAA GCTCGCAACT ATAA AGT-GCGAGC TTTTATATTTTCAAA TERM 4293 4028502 - 4028524 + r 90 -8.5 -4.89567 | gap 1, opp_overlap 4028502, overlap 4028497 TCCACACAAAAAAAA GCTCGCAACT ATAA AGT-GCGAGC TTTTATATTTTCAAA MADE_03729 4029772 - 4028594 - | GTPase Obg TERM 4294 4029843 - 4029854 + r 81 -7.2 -4.60797 | opp_overlap 4029842 AGTTTACACCAAATC GCGC GTCG GCGC TTTTATGTGTAACCA TERM 4295 4029996 - 4029981 - R 100 -11.8 -5.86976 | opp_overlap 4029981 4029995 TCACAAAACAAAAAA CCCCGC TTGC GCGGGG TTTTTCTAAGCCTGT TERM 4296 4029981 - 4029996 + r 100 -11.8 -4.84761 | opp_overlap 4029981, overlap 4029995 TCACAAAACAAAAAA CCCCGC TTGC GCGGGG TTTTTCTAAGCCTGT MADE_03730 4030289 - 4030032 - | 50S ribosomal protein L27 MADE_03731 4030616 - 4030305 - | 50S ribosomal protein L21 TERM 4297 4032264 - 4032252 - g 72 -6.2 -4.27843 | opp_overlap 4032260 TCTAAATACAAAGAA GCGC TGATT GCGC TGGCGCATATTTCAA MADE_03732 4031322 - 4032296 + | Geranylgeranyl pyrophosphate synthase TERM 4298 4032319 - 4032340 + T 100 -14.5 -5.4505 | opp_overlap 4032319, overlap 4032313 TAAGTAAGGTACGAA GGCGTGTTG TAAT CAACACGCC TTTTTTGTTGGGGAG TERM 4299 4032340 - 4032319 - T 95 -14.5 -3.23598 | opp_overlap 4032313 4032319 TAAGTAAGGTACGAA GGCGTGTTG TAAT CAACACGCC TTTTTTGTTGGGGAG MADE_03733 4033217 - 4032501 - | ZIP zinc transporter family protein TERM 4300 4033462 - 4033444 - R 93 -9.6 -4.87291 | opp_overlap 4033444 4033447 GAGCTTAACGAAAAA GAACAGCT TTA AGCTGCTC TTTAATAACACTATG MADE_03734 4034864 - 4033518 - | Xaa-Pro proline dipeptidase TERM 4301 4034622 - 4034609 - G 70 -5.3 -4.53303 | overlap 4034612 CAGGGCGATAGAAAA TAAGC GTAG GCTTA TCTACACCGTTAACC MADE_03735 4036711 - 4034981 - | putative soluble lytic murein transglycosylase TERM 4302 4038231 - 4038212 - g 83 -4.3 -5.31519 | overlap 4038213 ACAGCTAAACAAAAA CGAAGCT ATGATG AGCTTCA GTACTGCTCAAGCCA MADE_03736 4037532 - 4039682 + | fatty oxidation complex, alpha subunit TERM 4303 4039955 - 4039933 - g 78 -5.4 -4.89339 | opp_overlap 4039951, overlap 4039935 AACTACTCACAAAAA TTCCACGCAC AAC GGGCGCGGTA ACGGTTAACCGTTTA TERM 4304 4040494 - 4040472 - g 72 -9.1 -3.55071 | GCAGACCGTGCGAAA GCACTTGGC CTAAC GCCACGTGC GAAAATTCGCTCGAT MADE_03737 4039701 - 4040864 + | fatty oxidation complex, beta subunit TERM 4305 4040903 - 4040916 + T 100 -9.5 -5.80951 | opp_overlap 4040903 GCTAAATTTTGAAAA GGGCC TTCG GGCCC TTTTTTGTTTTCCGT TERM 4306 4040916 - 4040903 - T 89 -9.5 -4.17089 | opp_overlap 4040903 GCTAAATTTTGAAAA GGGCC TTCG GGCCC TTTTTTGTTTTCCGT MADE_03738 4041910 - 4040942 - | putative integrase TERM 4307 4041542 - 4041574 + g 72 -5.5 -4.50058 | opp_overlap 4041546 4041549, overlap 4041546 AAGTGCTACTGCTAA GTAATGATGGGTAGG CAC CCTACCAAGCAATGC TTTTACTTCTAACTG MADE_03739 4042203 - 4042649 + | hypothetical protein TERM 4308 4042682 - 4042735 + G 74 -8.1 -3.94402 | opp_overlap 4042675 GGGCTAAAGCCCACT GGGACGCTAACACGCAGGGCC GCTTCGCTATTA TGCCCTACGTGTTATCGCCCC TTATTTAAAAGTTAT MADE_03740 4042627 - 4042743 + | hypothetical protein TERM 4309 4043004 - 4042994 - f 88 -4 -5.71983 | opp_overlap 4042994 GTAAGTACAAAAAAA CAAA CTA TTTG TTTTACATGGTTTTA MADE_03741 4043108 - 4043233 + | hypothetical protein TERM 4310 4043380 - 4043366 - f 79 -5 -5.02421 | AAAATTAAAAACAAA GCACTT GGA AAATGC CATACGAGAATCTCA MADE_03742 4043436 - 4043555 + | hypothetical protein MADE_03743 4043595 - 4044095 + | hypothetical protein MADE_03744 4046173 - 4045136 - | ISCps1, transposase TERM 4311 4045962 - 4045976 + g 75 -11.4 -3.01791 | opp_overlap 4045962 TTAGCTGATATTAAA CGGGCA TCA TGCCCG TATTCACGCGCACAT TERM 4312 4045976 - 4045962 - G 87 -11.4 -3.83998 | opp_overlap 4045962 TTAGCTGATATTAAA CGGGCA TCA TGCCCG TATTCACGCGCACAT MADE_03745 4046355 - 4046693 + | FOG: Transposon-encoded proteins with TYA, reverse transcriptase,integrase domains in various combinations (ISS) TERM 4313 4046746 - 4046799 + F 71 -7.3 -3.94402 | CTCACTCCGTTCGCT GGGACGCATACATGCGGGGCG GCTTCGCCATTA TGCCCCACATGCCTGCGCCCC TTATTTAAAAGTTAT MADE_03746 4046831 - 4047169 + | hypothetical protein TERM 4314 4047201 - 4047255 + F 70 -8.6 -3.38314 | opp_overlap 4047216, overlap 4047220 CTCGCTGCCGCTCGC TGGGACGCAAACACATGCGCGG CTTCGCCATTA TTGCACACGTGTTTGCGCCCCA TATTTGGAAGTTAGG MADE_03747 4047215 - 4047709 + | hypothetical protein TERM 4315 4047751 - 4047802 + F 100 -13.7 -3.94402 | opp_overlap 4047763 CTCACTTCGTTCGCT GGGACGCATACACGTGGGCTG CTTCGCATTA TAGCCCACGCGTCTGCGCCCC TTATTTACAAGTTAT MADE_03748 4047826 - 4048056 + | hypothetical protein MADE_03749 4048153 - 4048278 + | hypothetical protein MADE_03750 4048373 - 4048543 + | hypothetical protein MADE_03751 4049399 - 4048572 - | Integrase TERM 4316 4049462 - 4049480 + r 76 -4.5 -5.08169 | overlap 4049452 TTACTTGGTTTCTTT GGCAAAG AAGAC CGTTGCC TTTTTTAAGATCTCT MADE_03752 4049740 - 4049447 - | transposase, IS911 MADE_03753 4049883 - 4050197 + | hypothetical protein TERM 4317 4050229 - 4050280 + F 84 -10.1 -3.94402 | gap 1, opp_overlap 4050241 CTCACTTCGTTCGCT GGGACGCATACACGTGGGCTGCTA CGCAT TA-TAGCCCACGCGCCTGCGCCCC TTATTTAAAAGTTAT MADE_03754 4050708 - 4050866 + | hypothetical protein MADE_03755 4051046 - 4050927 - | hypothetical protein MADE_03756 4051276 - 4051389 + | hypothetical protein MADE_03757 4051720 - 4051601 - | hypothetical protein TERM 4318 4051843 - 4051825 - H 71 -6 -4.24432 | AAATGGAAAACTAAA TGCTCTTT TTA AAGGAGCA TAAAAATGGAAGAAA MADE_03758 4051849 - 4052262 + | transcriptional regulator, XRE family MADE_03759 4052308 - 4052736 + | hypothetical protein MADE_03760 4052886 - 4053671 + | hypothetical protein TERM 4319 4053711 - 4053764 + F 71 -7.3 -3.94 | CTCACTGCGTTCGCT GGGACGCATACACGCAGGGCG GCTTCGCCATTA TGCCCTACGTGCCTGCGCCCC TTATTTAAAAGTTAG TERM 4320 4054020 - 4054032 + G 100 -4.1 -6.25578 | TATGAAATAGTTGGC CCATT CGG GATGG TTTTTTTTGTTTGCT MADE_03761 4053786 - 4054334 + | hypothetical protein TERM 4321 4054376 - 4054427 + F 100 -16.7 -3.94 | opp_overlap 4054409 CTCACTTCGTTCGTT GGGACGCGTACACGTGGGCTG CTTCGCATTA TAGCCCATGTGTATGCGCCCC TTATTTAAAAGTTAG MADE_03762 4054452 - 4055159 + | hypothetical protein TERM 4322 4055413 - 4055426 + F 74 -5.3 -4.71828 | TCTTATTAATGTTTA TAGTG CTTC CACTA TTTTGTTCCTCAGCT MADE_03763 4055831 - 4056193 + | putative orphan protein TERM 4323 4056225 - 4056278 + F 71 -7.3 -3.94 | CCTGCTACGCAGGCT GGGACGCATACACGCGGGGCG GCTTCGCCATTA TGCCCCACATGTCTGCGCCCC TTATTTAAAAGTTAG MADE_03764 4056312 - 4056674 + | hypothetical protein TERM 4324 4056716 - 4056769 + F 71 -7.3 -3.94402 | opp_overlap 4056688 CTCACTTCGTTCGCT GGGACGCATACACGTGGGGCG GCTTCGCCATTA TGCCCCACATGCCTGCGCCCC TTATTTAAAAGTTAT TERM 4325 4056963 - 4056977 + F 73 -7.8 -3.83318 | CTCAACTTCTTGATT CCACCT GTT GGGTGG TTCTATTGTTACCGA TERM 4326 4057267 - 4057248 - g 72 -2.9 -4.93288 | AATACGTAAACAAAA GTTCGTT AGATAA AACAAAC TTCATTCATTTTGTT MADE_03765 4057169 - 4057768 + | hypothetical protein MADE_03766 4059067 - 4058030 - | ISCps1, transposase TERM 4327 4058870 - 4058856 - G 87 -11.4 -3.83998 | opp_overlap 4058856 TTAGCTGATATTAAA CGGGCA TCA TGCCCG TATTCACGCGCACAT TERM 4328 4058856 - 4058870 + g 75 -11.4 -3.01791 | opp_overlap 4058856 TTAGCTGATATTAAA CGGGCA TCA TGCCCG TATTCACGCGCACAT MADE_03767 4059875 - 4060111 + | hypothetical protein TERM 4329 4060156 - 4060214 + T 89 -11.7 -3.60792 | opp_overlap 4060169, overlap 4060158 4060177 CACTCGCTGCCGCTC GCTGGGACGCAAACACGTGCGCGGC TTCGCCATT GTTGCACACGTGTTTGCGCCCCATA TTTGGAAGTTAGGCG TERM 4330 4060158 - 4060212 + T 100 -18.7 -3.38314 | opp_overlap 4060169, overlap 4060156 4060177 CTCGCTGCCGCTCGC TGGGACGCAAACACGTGCGCGGC TTCGCCATT GTTGCACACGTGTTTGCGCCCCA TATTTGGAAGTTAGG MADE_03768 4062495 - 4061341 - | replicative DNA helicase TERM 4331 4062455 - 4062440 - G 78 -6.2 -4.64598 | opp_overlap 4062428 GAACGATTGTAAAAA TCGTTA TCGG TAACGA GCTCGGCAACCTTAT TERM 4332 4062552 - 4062565 + r 79 -6.7 -4.56597 | GAACCTTCAATTTTT CGACA TTAT TGTCG TTTTTAGACGCAGAC MADE_03769 4063240 - 4062701 - | hypothetical protein TERM 4333 4063249 - 4063263 + r 77 -7.8 -4.17448 | GGTTCATTTAACGTC GCGTGA ATA TCGCGC TTTCTCGTTTCCTTA TERM 4334 4063329 - 4063346 + r 88 -9.1 -4.51378 | opp_overlap 4063329, overlap 4063324 CGCCGACATAAAAAA GCTGCGT CTTC GCGCAGC TTTTCTACTATCACT TERM 4335 4063346 - 4063329 - R 95 -8.4 -5.36441 | opp_overlap 4063329 4063324 CGCCGACATAAAAAA GCTGCG TCTTCG CGCAGC TTTTCTACTATCACT MADE_03770 4064406 - 4063438 - | hypothetical protein MADE_03771 4064977 - 4064465 - | putative orphan protein MADE_03772 4065581 - 4064970 - | putative RNA polymerase sigma factor TERM 4336 4065501 - 4065542 + g 70 -10.3 -2.55085 | gap 1, opp_overlap 4065504, overlap 4065500 4065499 4065515 TTCGCTTTTGTTACC GAACAC-CACATTGGCGTGT ACA ACACGTTGTTGTGTGTGTTC CATTATTTTCTCTTT TERM 4337 4065515 - 4065527 + g 71 -7.7 -3.9679 | opp_overlap 4065504, overlap 4065501 4065500 4065499 CGAACACCACATTGG CGTGT ACA ACACG TTGTTGTGTGTGTTC MADE_03773 4065658 - 4066302 + | MOSC domain containing protein MADE_03774 4066591 - 4066289 - | hypothetical protein MADE_03775 4067868 - 4066816 - | putative hydrolase TERM 4338 4068197 - 4068181 - R 100 -13.7 -5.78622 | opp_overlap 4068181 TTAGGCCAAAAAAAA GCCGCTC GAA GAGCGGC TTTTTTCAAATACGT TERM 4339 4068181 - 4068197 + r 100 -13.7 -5.05782 | opp_overlap 4068181 TTAGGCCAAAAAAAA GCCGCTC GAA GAGCGGC TTTTTTCAAATACGT MADE_03776 4068671 - 4068219 - | 50S ribosomal subunit protein L9 MADE_03777 4068925 - 4068698 - | 30S ribosomal protein S18 MADE_03778 4069338 - 4068937 - | 30S ribosomal protein S6 MADE_03779 4070712 - 4069480 - | GAF:ATP-binding region, ATPase-like:Histidine kinase A, N-terminal MADE_03780 4070962 - 4071249 + | YebG family protein TERM 4340 4071493 - 4071466 - g 74 -7.1 -4.24183 | gap 1, overlap 4071463 4071468 TATAATAAATAATAA GAGCGCTCTTAC TCAGT GTAAAAGCGC-C ATTGAAGTTAGTCAT TERM 4341 4071492 - 4071468 - g 83 -10.8 -3.69154 | overlap 4071466 4071463 TAATAAATAATAAGA GCGCTCTTAC TCAGT GTAAAAGCGC CATTGAAGTTAGTCA MADE_03781 4071446 - 4072210 + | ABC transporter, ATP-binding protein MADE_03782 4072210 - 4073550 + | putative permease TERM 4342 4073583 - 4073566 - T 75 -7.7 -4.03078 | opp_overlap 4073566 4073564 TCACGACATTAGAAA GGGAGAA GTTA CTCTCCC TCTTTCTCGTTTGTA MADE_03783 4075157 - 4073574 - | Methyl-accepting chemotaxis protein (PAS/PAC and MSP doamins) TERM 4343 4074111 - 4074086 - G 72 -10.6 -2.91681 | CTGCAATTGTAGAGA TGATATTGGC TGCTTC GCCAATATCA CTGGTGGACTGAGCA TERM 4344 4074482 - 4074464 - G 88 -14.6 -3.05816 | CCAGTTCGCAGGCAA GCGCAAGC TTG GCTTGCGC AATATGCGTGGCGTC TERM 4345 4074698 - 4074674 - G 70 -4.9 -4.48987 | GCGCGACAACTAAAA GCGCACTTATT AAC AACGAGGGCGC CATATGCATAAGCAT TERM 4346 4075327 - 4075339 + r 80 -6.3 -4.72029 | TTTAGGCTATAGGGA GTATC ACC GATAC TTTTGTTCCCTTCCC MADE_03784 4076818 - 4075313 - | sensor histidine kinase TERM 4347 4075893 - 4075881 - G 84 -7.7 -4.74103 | TCTTTAAGCGAAAAA CGCTT TTC AAGCG CTGTAAATTGTTCTT TERM 4348 4076837 - 4076862 + r 70 -8.3 -3.27525 | gap 1, opp_overlap 4076834 GCAGCCTCAAGATTC AC-GCGTCACAC ATT GTGTGACGCCGC TTAAATTTACAGGGC TERM 4349 4076876 - 4076896 + r 71 -9.7 -2.76711 | opp_overlap 4076872 4076888, overlap 4076875 4076888 GCTTAAATTTACAGG GCCCGATAA TAC TTAACGGGC GTTAATTTATCAGTC MADE_03785 4077980 - 4076898 - | methyl-accepting chemotaxis protein TERM 4350 4077412 - 4077422 + g 77 -6.8 -4.40298 | opp_overlap 4077411, overlap 4077419 ACAAGCTCAGAAACT TCCG TGG CGGA TTTGTTCGTTTCCGT TERM 4351 4078700 - 4078714 + G 81 -3.4 -5.33866 | overlap 4078698 CAGGTGCGCTAGGCG GCCTAC TCG GCGGGC TTTTTTCTACGTTTG MADE_03786 4078276 - 4079028 + | putative integral membrane protein MADE_03787 4080037 - 4079075 - | Co/Zn/Cd efflux system component TERM 4352 4080359 - 4080370 + H 72 -4.4 -4.66163 | opp_overlap 4080351 4080369 GCGCAAATTGTAAGC GCTT ACAA AAGC TTTTTACGTGGCCGT TERM 4353 4080840 - 4080828 - H 71 -4.8 -4.58685 | AAATGCGTGCAAAAA TGCC TGAAG GGCA AGGAAGTTGGCCGGC TERM 4354 4083129 - 4083111 - H 73 -9.6 -3.26649 | opp_overlap 4083114 4083115 4083115 4083117, overlap 4083099 4083115 ATAGCCGCACAGTAA CAAAGCGG ATG CCGCTTTA GCACCCTAAAGCGGC TERM 4355 4083150 - 4083115 - H 100 -12.6 -4.29106 | opp_overlap 4083114 4083115 4083115 4083117, overlap 4083111 4083099 CCGCACAGTAACAAA GCGGATGCCGCTTTAG CACC CTAAAGCGGCACTCTC CATTTGATAAGAATT TERM 4356 4083115 - 4083151 + H 77 -11 -2.84527 | gap 1, opp_overlap 4083111 4083099 4083115, overlap 4083114 4083115 4083117 CCGCACAGTAACAAA GCGGA-TGCCGCTTTAG CACC CTAAAGCGGCACTCTCC ATTTGATAAGAATTA TERM 4357 4083117 - 4083148 + H 91 -13.8 -2.67803 | opp_overlap 4083111 4083099 4083115, overlap 4083115 4083115 4083114 GCACAGTAACAAAGC GGATGCCGCTTTAG CACC CTAAAGCGGCACTC TCCATTTGATAAGAA TERM 4358 4085050 - 4085030 - g 83 -8.9 -4.24342 | opp_overlap 4085046 TTCGCTACGAAGAAA CCGAGGTAC CTA GCACCGCGG AAGTTCGCGTTCCTA MADE_03790 4083178 - 4086126 + | TonB-dependent receptor TERM 4359 4086150 - 4086164 + F 85 -4.2 -5.64274 | opp_overlap 4086150 AGCACTTACGATAAC GGCCTT TTT AAGCCC TTTTTTTGTGCCTGC MADE_03791 4086170 - 4087483 + | glycosyl hydrolase, family 16 TERM 4360 4087502 - 4087484 - f 73 -9.6 -3.26649 | opp_overlap 4087487 4087488 4087488 4087490, overlap 4087472 4087488 ATAGCCGCACAGTAA CAAAGCGG ATG CCGCTTTA GCACCCTAAAGCGGC TERM 4361 4087488 - 4087524 + F 77 -11 -2.84527 | gap 1, opp_overlap 4087484 4087472 4087488, overlap 4087487 4087488 4087490 CCGCACAGTAACAAA GCGGA-TGCCGCTTTAG CACC CTAAAGCGGCACTCTCC ATTTGATAAGAATTA TERM 4362 4087523 - 4087488 - f 100 -12.6 -4.29106 | opp_overlap 4087488 4087487 4087488 4087490, overlap 4087484 4087472 CCGCACAGTAACAAA GCGGATGCCGCTTTAG CACC CTAAAGCGGCACTCTC CATTTGATAAGAATT TERM 4363 4087490 - 4087521 + F 91 -13.8 -2.67803 | opp_overlap 4087484 4087472 4087488, overlap 4087488 4087488 4087487 GCACAGTAACAAAGC GGATGCCGCTTTAG CACC CTAAAGCGGCACTC TCCATTTGATAAGAA TERM 4364 4089423 - 4089403 - g 83 -8.9 -4.24342 | opp_overlap 4089419 TTCGCTACGAAGAAA CCGAGGTAC CTA GCACCGCGG AAGTTCGCGTTCCTA MADE_03792 4087551 - 4090499 + | TonB-dependent receptor TERM 4365 4090522 - 4090538 + T 100 -12.3 -5.64274 | opp_overlap 4090509 4090522, overlap 4090509 AAGCACTTACGATAA GGGCCTT TTT AAGGCCC TTTTTTTGTGCCTGC TERM 4366 4090538 - 4090522 - T 87 -12.3 -3.43264 | opp_overlap 4090509 4090522, overlap 4090509 AAGCACTTACGATAA GGGCCTT TTT AAGGCCC TTTTTTTGTGCCTGC MADE_03793 4092163 - 4090676 - | Na+/H+ antiporter, NhaC family protein TERM 4367 4092137 - 4092147 + g 82 -3.2 -5.60689 | TGCGAGAAAGAGGTG TGGT GTA ACCG TTTTTTCTTCTGTCA TERM 4368 4092376 - 4092337 - R 100 -13.7 -5.0538 | opp_overlap 4092342, overlap 4092342 GTCGACCCCAAAAAA CAAAAGCGTCGCCAGTA TTTATG TGCTGGCGACGCTTTTT CGAAGGTTTAGGTTA TERM 4369 4092342 - 4092371 + r 100 -16.5 -4.60924 | opp_overlap 4092337 4092342 CCCCAAAAAACAAAA GCGTCGCCAGTAT TTAT GTGCTGGCGACGC TTTTTCGAAGGTTTA TERM 4370 4092371 - 4092342 - R 100 -13.6 -5.42198 | opp_overlap 4092342, overlap 4092337 CCCCAAAAAACAAAA GCGTCGCCAGTA TTTATG TGCTGGCGACGC TTTTTCGAAGGTTTA MADE_03794 4094961 - 4092409 - | glucan 1,4-beta-glucosidase TERM 4371 4094826 - 4094841 + g 75 -6.1 -4.48176 | CGATATCTAACTTGG GCCAG ATCTCA CTGGC TTTATTCGTTTTCTC MADE_03795 4096236 - 4094974 - | glucose/galactose transporter family protein MADE_03796 4096268 - 4096387 + | hypothetical protein TERM 4372 4096602 - 4096586 - g 72 -5.1 -4.63218 | overlap 4096588 CTGCGCCCAAGAAAA TACCATC GAG GACGGCA CTAACGGCGATGAAG MADE_03797 4096443 - 4097801 + | beta-glucosidase MADE_03798 4097822 - 4098823 + | galactose operon repressor TERM 4373 4099742 - 4099760 + G 76 -11.8 -2.59039 | overlap 4099741 TGTATTGATTGGGGT GGTAAACG TGG CGTTTACC CTTGTGGCCATGCTT MADE_03799 4098825 - 4100399 + | MFS transporter MADE_03800 4102056 - 4100389 - | MdlB protein TERM 4374 4100622 - 4100632 + g 81 -8.2 -4.41348 | AAATAGCCCGAGCTA GCGC GAC GCGC TTTCTTTCACCACCA MADE_03801 4103749 - 4102049 - | ABC transporter ATP-binding protein TERM 4375 4102837 - 4102855 + g 73 -4.5 -4.79223 | gap 1 GATATAGTTCGTCTT GCGC-GGC CTCT GCCTGTGC TTTTTGATGATATAC TERM 4376 4103094 - 4103115 + g 78 -5.1 -4.91852 | GCATTTAAGTTTTCA CTGGCTTGT TTCA GCAGGTCAG TTTGTTTTTGATGGG TERM 4377 4103981 - 4103954 - R 89 -12 -3.61715 | opp_overlap 4103973, overlap 4103955 GACTGGCTGCAAGAA CTCTCAGCGGCA GGGA TGCCGCTGCGAA GCCCCCACGGATGGG TERM 4378 4103980 - 4103955 - R 90 -13.3 -2.76815 | opp_overlap 4103973, overlap 4103954 ACTGGCTGCAAGAAC TCTCAGCGGCA GGGA TGCCGCTGCGA AGCCCCCACGGATGG MADE_03802 4104147 - 4104034 - | cyd operon protein YbgTEB3 MADE_03803 4105294 - 4104158 - | Cytochrome D ubiquinol oxidase subunit II (Cytochrome BD-I oxidase subunit II) TERM 4379 4105228 - 4105214 - G 77 -11.4 -3.28001 | CACCCCTAAATCGAA GCCGTC AGT GACGGC GAACCCAATTAGCAG MADE_03804 4106871 - 4105291 - | putative cytochrome d ubiquinol oxidase, subunit I TERM 4380 4107154 - 4107110 - R 77 -10.2 -3.38339 | overlap 4107111 AGGATCTAATATGAA TCTTGCGCCAATTTTGTCAC TATTG GCGACAAAATTGACACAAAT AAAAAGGAGACGGGG TERM 4381 4107153 - 4107111 - R 91 -13.7 -2.62522 | overlap 4107110 GGATCTAATATGAAT CTTGCGCCAATTTTGTCAC TATTG GCGACAAAATTGACACAAA TAAAAAGGAGACGGG MADE_03805 4107844 - 4107242 - | cytochrome c family protein, putative TERM 4382 4107524 - 4107508 - G 84 -7.9 -4.73448 | ATAGAGAGGCAAAAA GCGCTAG TTG CTCGCGC TCCCACTCGTCTGGC TERM 4383 4108892 - 4108909 + G 80 -5.5 -5.0133 | opp_overlap 4108891 AAGAAAGTCAGATAT TGCACTG ATTG CAGCGCA TTTTTTAGCCCAGTC MADE_03806 4107996 - 4109318 + | sigma-54 dependent transcriptional regulator MADE_03807 4109423 - 4109791 + | hypothetical protein TERM 4384 4110316 - 4110330 + G 76 -4.2 -5.00138 | opp_overlap 4110303 4110314, overlap 4110317 AACTGCGTATCAACG CCGATG CAG CATCGC TTTTTGCTTTAGATA TERM 4385 4111788 - 4111800 + G 71 -3.3 -4.77036 | TTATTTCATATCTCT GGGCT TTT AGCAC TTTTTGATAATGCGC MADE_03808 4109862 - 4111979 + | TonB-dependent receptor TERM 4386 4112020 - 4112053 + T 85 -6.7 -5.15969 | opp_overlap 4112021, overlap 4112021 4112023 TAAATGACAGAACTT ATTGAGCTTAAGAGG CAGG CCTCTTAAGCTCTCG TTTTTTCAATTAAAG TERM 4387 4112021 - 4112052 + T 80 -10.2 -3.68859 | opp_overlap 4112021, overlap 4112020 4112023 AAATGACAGAACTTA TTGAGCTTAAGAGG CAGG CCTCTTAAGCTCTC GTTTTTTCAATTAAA TERM 4388 4112052 - 4112021 - T 72 -10.2 -2.65166 | opp_overlap 4112020 4112021 4112023 AAATGACAGAACTTA TTGAGCTTAAGAGG CAGG CCTCTTAAGCTCTC GTTTTTTCAATTAAA TERM 4389 4112023 - 4112050 + T 100 -17.2 -3.41448 | opp_overlap 4112021, overlap 4112021 4112020 ATGACAGAACTTATT GAGCTTAAGAGG CAGG CCTCTTAAGCTC TCGTTTTTTCAATTA MADE_03809 4112833 - 4112063 - | putative orphan protein MADE_03810 4112859 - 4113125 + | hypothetical protein TERM 4390 4113306 - 4113321 + TF 83 -9 -4.03888 | ATACATACTGCTTTC TCAGCG TCTG CGCTGA TTATTATTCTCGCTA MADE_03811 4113458 - 4113339 - | hypothetical protein TERM 4391 4113385 - 4113401 + gF 100 -10.8 -5.4833 | opp_overlap 4113385 ATAGAATTCACTAAA CCCGCC GCAAA GGCGGG TTTTTTATTGGCTCG TERM 4392 4113401 - 4113385 - Gf 86 -10.8 -3.81259 | opp_overlap 4113385 ATAGAATTCACTAAA CCCGCC GCAAA GGCGGG TTTTTTATTGGCTCG TERM 4393 4113555 - 4113545 - gH 74 -6.8 -4.19817 | GCTACCGACGCAAAA GTGG TAG CCAC CCCCATGTCGACAGA MADE_03812 4113446 - 4113853 + | Ketosteroid isomerase like protein MADE_03813 4114067 - 4114864 + | acid phosphatase TERM 4394 4114912 - 4114877 - f 83 -9 -4.10178 | opp_overlap 4114887, overlap 4114879 TAACAACACCAGAAA TAGCGAGTCAGCGGAT CCTC ATTCGCTGACTTGCAA TACTCGCTCTACGTG TERM 4395 4114910 - 4114879 - f 88 -11.6 -3.62893 | opp_overlap 4114887, overlap 4114877 ACAACACCAGAAATA GCGAGTCAGCGGAT CCTC ATTCGCTGACTTGC AATACTCGCTCTACG MADE_03814 4115166 - 4115594 + | diguanylate cyclase TERM 4396 4116140 - 4116170 + F 70 -9.8 -2.61264 | opp_overlap 4116143, overlap 4116143 4116147 4116150 AGAACCATAGTGAGG ACACTGGTAACGTC GTC GACGTTATTAGTGA GTTGTCACTCGACGA TERM 4397 4116143 - 4116167 + F 72 -10.1 -2.6063 | opp_overlap 4116143, overlap 4116140 4116147 4116150 ACCATAGTGAGGACA CTGGTAACGTC GTC GACGTTATTAG TGAGTTGTCACTCGA TERM 4398 4116147 - 4116163 + F 73 -9.5 -3.23711 | opp_overlap 4116143, overlap 4116143 4116140 4116150 TAGTGAGGACACTGG TAACGTC GTC GACGTTA TTAGTGAGTTGTCAC TERM 4399 4116237 - 4116255 + F 100 -11.6 -5.76633 | overlap 4116238 CATACCTCTGATTTT GGCCCGCC TTT GGCGGGCA TTTTTTTATCTGTAC TERM 4400 4116238 - 4116254 + F 100 -15.1 -4.04353 | overlap 4116237 ATACCTCTGATTTTG GCCCGCC TTT GGCGGGC ATTTTTTTATCTGTA MADE_03815 4116320 - 4117540 + | putative mfs transporter TERM 4401 4117741 - 4117755 + F 95 -8.5 -5.42975 | GTTGTGGTTTTTTAA GGGGC TTCAT GCCCC TTTTTCTTTGTCTCG MADE_03816 4117911 - 4118684 + | putative siderophore utilization protein MADE_03817 4118879 - 4119070 + | protein YjbJ TERM 4402 4119205 - 4119168 - T 100 -16.5 -2.6924 | opp_overlap 4119174, overlap 4119174 GAAATAAGCTAGAAT TAGAAAGGGCCGCAACA TGAA TATTGCGGCCCTTTTTA CTGCCTATCGTTCGC TERM 4403 4119174 - 4119199 + T 100 -13.3 -4.76041 | opp_overlap 4119174 4119168 AGCTAGAATTAGAAA GGGCCGCAACA TGAA TATTGCGGCCC TTTTTACTGCCTATC TERM 4404 4119199 - 4119174 - T 100 -15.5 -4.10612 | opp_overlap 4119174, overlap 4119168 AGCTAGAATTAGAAA GGGCCGCAACA TGAA TATTGCGGCCC TTTTTACTGCCTATC MADE_03818 4119405 - 4119271 - | hypothetical protein TERM 4405 4119479 - 4119489 + r 70 -5.4 -4.31895 | CCACTTGTGTGTGAG CCAA GCG TTGG TTTATTGATGTGTGT MADE_03819 4120478 - 4119762 - | hypothetical protein TERM 4406 4120577 - 4120594 + r 88 -11.3 -3.671 | opp_overlap 4120577 GAAATAATAAAAAAA GCCCTGT AAAA ACAGGGC TTTCAAAATTTATTT TERM 4407 4120594 - 4120577 - R 100 -11.3 -6.01369 | opp_overlap 4120577 GAAATAATAAAAAAA GCCCTGT AAAA ACAGGGC TTTCAAAATTTATTT MADE_03820 4121257 - 4120604 - | hypothetical protein MADE_03821 4121824 - 4121408 - | hypothetical protein MADE_03822 4121963 - 4121850 - | hypothetical protein TERM 4408 4122092 - 4122078 - g 76 -9.2 -3.71672 | CCGCAGGAAAACTAA CGCCAG TGT CCGGCG GAATTATACACTGGC TERM 4409 4122539 - 4122510 - g 71 -3.6 -4.7373 | gap 1, opp_overlap 4122519 GTAGCGTAGCAAAAA CTATTGCCAGCCC ACTTA GGGCTAG-ATTAG GCCGTAAACAGGTAG MADE_03823 4121969 - 4122901 + | Alpha/beta hydrolase fold protein MADE_03824 4123554 - 4122919 - | hypothetical protein TERM 4410 4123566 - 4123531 - G 100 -15 -3.85817 | gap 1, opp_overlap 4123526 4123520 4123532, overlap 4123532 ACTGGTGGGCATAAA CTTTTTACTGCGCATGC CCA ACATGCGCAGTAAAA-G TATGGTTCAGTATTT TERM 4411 4123532 - 4123566 + g 100 -16.7 -2.9428 | opp_overlap 4123531 4123532, overlap 4123526 4123520 CTGGTGGGCATAAAC TTTTTACTGCGCATG CCCAA CATGCGCAGTAAAAG TATGGTTCAGTATTT TERM 4412 4123566 - 4123532 - G 93 -15.2 -2.91276 | opp_overlap 4123532 4123526 4123520, overlap 4123531 CTGGTGGGCATAAAC TTTTTACTGCGCATGC CCA ACATGCGCAGTAAAAG TATGGTTCAGTATTT MADE_03825 4124158 - 4123595 - | CBS domain protein MADE_03826 4124472 - 4124597 + | hypothetical protein TERM 4413 4124734 - 4124717 - f 87 -3.5 -5.75342 | TCGTTCTAAAAAAAA GAATAAA TGCT TTCATTC TATGCGATTTTTAGT MADE_03827 4124758 - 4125327 + | putative cytochrome b561 MADE_03828 4125351 - 4125917 + | YceI TERM 4414 4125950 - 4125965 + T 95 -11.8 -4.4891 | opp_overlap 4125950 TCACATTAAAATAAA GCCCCG TCCT CGGGGC TTTTCTGCTCATGCG TERM 4415 4125965 - 4125950 - T 100 -11.8 -4.75288 | opp_overlap 4125950 TCACATTAAAATAAA GCCCCG TCCT CGGGGC TTTTCTGCTCATGCG MADE_03829 4127276 - 4125984 - | Respiratory NADH dehydrogenase II TERM 4416 4127342 - 4127292 - R 82 -11.4 -3.20382 | gap 1, overlap 4127295 GGGTATACCTATTAA CAATCATTCCACGTATATCACCT GCTAGA AGG-GCTATACGTGGCATGACTG CACCCACGCTGACCT TERM 4417 4127339 - 4127295 - R 79 -9.5 -3.74361 | gap 1, overlap 4127292 TATACCTATTAACAA TCATTCCACGTATATCACCT GCTAGA AGG-GCTATACGTGGCATGA CTGCACCCACGCTGA MADE_03830 4129469 - 4127457 - | putative TonB-dependent receptor protein MADE_03831 4129471 - 4129560 + | hypothetical protein TERM 4418 4130077 - 4130094 + G 74 -3.3 -5.03314 | overlap 4130071 CAGGGCTTATGGTGT GCACCGT TATC ATGGCGC TTTTTTCAGGGTCAC MADE_03832 4129806 - 4130249 + | hypothetical protein MADE_03833 4130518 - 4131342 + | putative transcriptional regulator, LysR family protein TERM 4419 4131408 - 4131428 + T 100 -15.5 -5.16133 | opp_overlap 4131408 ACACGGAAACAAAAA TGGCAGCGT TAA ACGCTGCCA TTTTTCTATTGTACT TERM 4420 4131428 - 4131408 - T 100 -15.5 -5.31519 | opp_overlap 4131408 ACACGGAAACAAAAA TGGCAGCGT TAA ACGCTGCCA TTTTTCTATTGTACT MADE_03834 4132863 - 4131469 - | Long-chain fatty acid transport protein TERM 4421 4133846 - 4133836 - g 82 -6.8 -4.79352 | TGATTTAGAAGAAAA GCTC ACT GAGC TTACGCCAGACAAAA MADE_03835 4133216 - 4134214 + | predicted NADP-dependent oxidoreductase TERM 4422 4134225 - 4134267 + T 79 -8.4 -3.98804 | opp_overlap 4134228 4134230 4134232, overlap 4134227 TATAAAGGCTAAGCA TAAGATATAGCGCGCATTGC ATC GCGATGCGCGCTACATGCCA TTGTTTAACGTTTCA TERM 4423 4134227 - 4134266 + T 78 -10.8 -2.9856 | gap 1, opp_overlap 4134228 4134230 4134232, overlap 4134225 TAAAGGCTAAGCATA AG-ATATAGCGCGCATTGC ATC GCGATGCGCGCTACATGCC ATTGTTTAACGTTTC TERM 4424 4134264 - 4134228 - T 100 -14.5 -3.52941 | opp_overlap 4134227 4134225, overlap 4134230 4134232 AAAGGCTAAGCATAA GATATAGCGCGCATTGC ATC GCGATGCGCGCTACATG CCATTGTTTAACGTT TERM 4425 4134262 - 4134230 - T 100 -17.1 -3.33214 | opp_overlap 4134227 4134225, overlap 4134228 4134232 AGGCTAAGCATAAGA TATAGCGCGCATTGC ATC GCGATGCGCGCTACA TGCCATTGTTTAACG TERM 4426 4134260 - 4134232 - T 100 -17.5 -3.2302 | opp_overlap 4134227 4134225, overlap 4134230 4134228 GCTAAGCATAAGATA TAGCGCGCATTGC ATC GCGATGCGCGCTA CATGCCATTGTTTAA MADE_03836 4135357 - 4134293 - | diguanylate cyclase TERM 4427 4135392 - 4135407 + r 73 -7.6 -4.08317 | AGTTAAAATTGAACG TAAGCC CATT GGCTTA TTTGGTTTACGCTTG MADE_03837 4137301 - 4135430 - | Signal transduction histidine kinase MADE_03838 4138262 - 4137375 - | ABC transporter substrate binding protein MADE_03839 4139507 - 4138521 - | flavin dependent oxidoreductase TERM 4428 4138764 - 4138749 - G 72 -9 -3.53224 | CATCGGCTTGGCAAA GGGCTT GTTT AAGCCC CGGCGCATATTCATA TERM 4429 4139561 - 4139574 + H 76 -6.7 -4.36586 | overlap 4139550 4139558 GTATGAACGTGTCGT CCGTT TTAC AACGG TTGTTTTAGTTATGT TERM 4430 4139696 - 4139720 + G 100 -10 -4.85782 | opp_overlap 4139696 TCAATACACGAAAAA GCCTGCGATT TTGTC ATTCGCAGGC TTTGTTTTTAAGCAA TERM 4431 4139720 - 4139696 - g 100 -10 -4.87807 | opp_overlap 4139696 TCAATACACGAAAAA GCCTGCGATT TTGTC ATTCGCAGGC TTTGTTTTTAAGCAA MADE_03840 4139619 - 4139750 + | hypothetical protein MADE_03841 4140582 - 4140064 - | CBS domain pair, putative TERM 4432 4140429 - 4140446 + g 81 -8.5 -4.5442 | opp_overlap 4140429 4140432 TTTCATCAGATGCAA TAACTGG AGCA CCAGTTA TTTTATGCTTCGCAA MADE_03842 4140816 - 4140601 - | hypothetical protein MADE_03843 4141766 - 4140972 - | Parvulin-like peptidyl-prolyl isomerase MADE_03844 4142505 - 4141822 - | respiratory nitrate reductase, gamma subunit MADE_03845 4143248 - 4142508 - | nitrate reductase molybdenum cofactor assembly chaperone TERM 4433 4143115 - 4143128 + g 81 -8.1 -4.41302 | opp_overlap 4143114 4143115, overlap 4143107 CGCTGATCGACAAAT GCGAG CAGA CTCGC TTTGTTGGTTTCATC MADE_03846 4144561 - 4143248 - | nitrate reductase, beta subunit MADE_03847 4148208 - 4144783 - | nitrate reductase, alpha subunit TERM 4434 4145178 - 4145159 - G 71 -10 -3.21276 | gap 1, overlap 4145157 TCGTTGTCGACAATA CCTG-CGCG CTG CGCGTCAGG TTCAGAAATCCATAC TERM 4435 4149542 - 4149520 - g 80 -6.3 -4.84262 | GAACAATCAATAAAA TGAGCGGTA GCTTG TATCGCTCA AAATCTCAACTTGAA MADE_03848 4148916 - 4150682 + | Signal transduction histidine kinase, nitrate/nitrite-specific MADE_03849 4151765 - 4150707 - | molybdenum ABC transporter, ATP-binding protein MADE_03850 4152442 - 4151768 - | molybdenum ABC transporter, permease protein TERM 4436 4152313 - 4152301 - G 76 -9.1 -3.66288 | TAGGCGGCAAGATAA GTGGC ATT GCCAC CAGGGCAGTTAACAG MADE_03851 4153223 - 4152444 - | molybdenum ABC transporter, periplasmic molybdate-binding protein TERM 4437 4153244 - 4153280 + r 76 -7.4 -4.15998 | gap 1, opp_overlap 4153253, overlap 4153253 TCTAACCATGGTAAA ACGATA-AAAGGTGCGA GTAC TCGCACCTTGATATCGC TTGTTTGCTTTGCCT TERM 4438 4153270 - 4153253 - R 95 -11.3 -4.67635 | opp_overlap 4153244 4153253 GGTAAAACGATAAAA GGTGCGA GTAC TCGCACC TTGATATCGCTTGTT TERM 4439 4153253 - 4153270 + r 85 -11.3 -3.30854 | opp_overlap 4153253, overlap 4153244 GGTAAAACGATAAAA GGTGCGA GTAC TCGCACC TTGATATCGCTTGTT MADE_03852 4154934 - 4153294 - | Nitrate/nitrite transporter TERM 4440 4153453 - 4153441 - G 74 -5.5 -4.66537 | TTTGGGAATATAAAA GGCAC CGT ATGCC GCTACAGCTGACGTC TERM 4441 4154411 - 4154382 - G 71 -10.1 -3.15574 | opp_overlap 4154391, overlap 4154380 4154391 CGAATGTCATGAACA GTGGCACAACGAT TTGC ATCGTTGTAACAC CAAAGTTACCCAAAC TERM 4442 4155244 - 4155262 + G 76 -7.4 -4.20516 | opp_overlap 4155232, overlap 4155245 AACCCGCCACCATCA TGATGGTC GAC GACCATCC TTTATTGCGTAAAGG TERM 4443 4155245 - 4155261 + G 77 -10.9 -3.11988 | opp_overlap 4155232, overlap 4155244 ACCCGCCACCATCAT GATGGTC GAC GACCATC CTTTATTGCGTAAAG TERM 4444 4155358 - 4155345 - g 72 -6.7 -4.25658 | AGCTCAGGAAAAGAA GCCAT CGAA ATGGC AGTGCAGTTGGAGCC TERM 4445 4155834 - 4155807 - g 76 -4 -5.0133 | overlap 4155812 CACTTTCTCAAAAAA CTGAATCTACGC TCTC GCGTGGAAGCAG CGGTATGGATGGTTA MADE_03853 4155216 - 4155869 + | Nitrate/nitrite response regulator (CheY, HTH domain) TERM 4446 4155933 - 4155923 - g 74 -5.4 -4.60317 | ATAGAACAAGCAAAA CAGA TCA TCTG GGACACTATCACGCC MADE_03854 4155872 - 4157107 + | molybdopterin biosynthesis protein MADE_03855 4157328 - 4157489 + | hypothetical protein MADE_03856 4157499 - 4157942 + | hypothetical protein MADE_03857 4158384 - 4157920 - | molybdenum cofactor biosynthesis protein E TERM 4447 4158064 - 4158076 + g 77 -3.3 -5.12617 | AATAATGAACTCACA CGCCT CAA ATGCG TTTTTTCGATGCTTG MADE_03858 4158632 - 4158387 - | molybdopterin converting factor, subunit 1 MADE_03859 4159102 - 4158629 - | molybdenum cofactor biosynthesis protein C TERM 4448 4159033 - 4159045 + g 72 -4.7 -4.66609 | CCGCTTTTGCTATGC GCGTC GAT GCCGC TTTTTCGCTCACATC MADE_03860 4159665 - 4159120 - | molybdenum cofactor biosynthesis protein B MADE_03861 4160245 - 4159652 - | molybdopterin guanine dinucleotide synthase MADE_03862 4161089 - 4160247 - | molybdenum cofactor biosynthesis protein A TERM 4449 4160587 - 4160599 + g 71 -7.7 -3.85817 | CCTTGCTCAATGAGT CGATC CTT GATCG TTTGTCCGGCGACAT TERM 4450 4160615 - 4160633 + g 72 -6.1 -4.30987 | TTTGTCCGGCGACAT GGTTTTT ATCAA AAAAACC TTTGTTGTCACCGGT TERM 4451 4161451 - 4161431 - R 100 -13.3 -5.24531 | AGGGGGTATAAAAAA GCCGACCCA GAT TGAGTCGGC AACTAACGCGTGGAT MADE_03863 4162667 - 4161471 - | hypothetical protein TERM 4452 4162770 - 4162788 + H 91 -11.8 -4.12599 | opp_overlap 4162769 4162768 4162772 CGACACTTGAAAATT GAGGTAGT CGG ACTACCTC TTTTGGGGAATTGTT MADE_03864 4162885 - 4163619 + | molybdopterin biosynthesis protein MoeB MADE_03865 4164242 - 4163658 - | putative lipid carrier protein MADE_03866 4166095 - 4164293 - | thiamine pyrophosphate-binding domain protein TERM 4453 4165598 - 4165572 - G 85 -3.6 -5.54192 | opp_overlap 4165573, overlap 4165573 ACCAATTGAAAAAAA CGTTCAGCCG CCATATT CGGCTGACCT TTCGATCTTGCGCCT MADE_03867 4166280 - 4167278 + | putative protease MADE_03868 4167325 - 4168218 + | putative protease MADE_03869 4168428 - 4168571 + | acyl-CoA dehydrogenase-like protein MADE_03870 4168909 - 4169103 + | probable oxoisovalerate dehydrogenase alpha and beta subunits MADE_03871 4169837 - 4169148 - | regulator of cell morphogenesis and NO signaling TERM 4454 4169974 - 4169952 - H 72 -10 -2.73483 | overlap 4169966 ATTGTACCTTAATGA TTCAGGGTAA ATA TTACCCTAAA GGTATAAATCACCAT MADE_03872 4169988 - 4171508 + | anaerobic nitric oxide reductase transcription regulator MADE_03873 4171559 - 4171897 + | Invasion gene expression up-regulator, SirB MADE_03874 4173106 - 4171904 - | Heme/copper membrane protein TERM 4455 4172636 - 4172626 - G 74 -5.4 -4.72846 | GTAGATAGGTAAAAA GGTT CAT AACC GACATTAGTACTAAC TERM 4456 4172727 - 4172714 - G 76 -2.3 -5.4505 | TTGGCCAACAAAAAA TGCCG TTAA CGGTA AAAATACCAAATCGG TERM 4457 4172902 - 4172886 - G 85 -6.5 -5.14563 | overlap 4172887 GCGGTGAGTAAAAAA CCAGCGA TTA TCGCTGC CGTGAAGCCAAACAA TERM 4458 4172901 - 4172887 - G 79 -10 -3.68256 | overlap 4172886 CGGTGAGTAAAAAAC CAGCGA TTA TCGCTG CCGTGAAGCCAAACA MADE_03875 4174407 - 4173112 - | Nitrate/nitrite transporter TERM 4459 4173306 - 4173279 - GH 71 -3.4 -4.8048 | gap 1, overlap 4173282 CTGCGACACCAAAAA GAATTGGGAGTGT GCA AC-CGCCCAATGC GCCAAGCATGGCGAC TERM 4460 4173797 - 4173787 - GH 79 -2.4 -5.45652 | opp_overlap 4173787 AGGCTTAACAAAAAA CGCC AAC GGCC TTTGTTTATTCTGCT MADE_03876 4174359 - 4174502 + | hypothetical protein MADE_03877 4174862 - 4176328 + | Nitrate transporter TERM 4461 4176348 - 4176370 + F 70 -3.3 -4.87291 | opp_overlap 4176348 AACTCGTCAGTTAAA GGCTTCCCT AAAAC ACGGATGCC TTTTTCGTTAACCTA TERM 4462 4177560 - 4177576 + G 76 -8.7 -4.11216 | opp_overlap 4177560 4177559 TTGGTAAAACAAATC GCTGCTG CGC TAGCAGC TTTTCACAATACAGA MADE_03878 4176396 - 4178156 + | Serine/threonine protein kinase MADE_03879 4178162 - 4178602 + | Hemerythrin HHE cation binding domain protein MADE_03880 4179096 - 4179464 + | ABC transporter ATPase MADE_03881 4180198 - 4179806 - | hypothetical protein TERM 4463 4180062 - 4180075 + g 79 -2.3 -5.5208 | TCGACAACCATTTTA GGCTC AATA GAACC TTTTTTGTCTTCTCG TERM 4464 4180133 - 4180144 + g 78 -5.8 -4.82855 | opp_overlap 4180133 TTTTGCGAACAAGAA CAGC AAGC GCTG TTTTTCGCTTTGCTC MADE_03882 4182108 - 4180318 - | anaerobic ribonucleoside triphosphate reductase TERM 4465 4180935 - 4180918 - G 76 -4.9 -4.74706 | gap 1, opp_overlap 4180918, overlap 4180922 TTCAATACCTAAAAA CTCAGCAG CTT CTGCT-AG TCCGTTGACTCCCAG TERM 4466 4181270 - 4181254 - G 88 -3.7 -5.63517 | opp_overlap 4181254 TTGGTAAACAAAAAA TGAGTTA CCT TCACTCA TCGCTTTAGCGCATG MADE_03883 4182538 - 4182092 - | Radical enzyme activating protein TERM 4467 4182871 - 4182830 - R 76 -4.6 -5.12785 | gap 1, opp_overlap 4182839, overlap 4182837 4182839 TAACTAAAAAATAAA GTTAAAATAGTGGAAGCTC AATCA GAACTTCCACT-TTCCATC CTTGTTTATAACTTT TERM 4468 4182865 - 4182837 - R 80 -8.2 -4.46617 | opp_overlap 4182839, overlap 4182830 4182839 AAAATAAAGTTAAAA TAGTGGAAGCTC AATCA GAACTTCCACTT TCCATCCTTGTTTAT TERM 4469 4182863 - 4182839 - R 86 -10.8 -3.80537 | opp_overlap 4182839, overlap 4182837 4182830 AATAAAGTTAAAATA GTGGAAGCTC AATCA GAACTTCCAC TTTCCATCCTTGTTT TERM 4470 4182839 - 4182863 + r 73 -8.6 -3.74658 | opp_overlap 4182837 4182830 4182839 AATAAAGTTAAAATA GTGGAAGCTC AATCA GAACTTCCAC TTTCCATCCTTGTTT MADE_03884 4184766 - 4182934 - | Glucosamine-fructose-6-phosphate aminotransferase MADE_03885 4185578 - 4184769 - | transcriptional regulator, DeoR family protein TERM 4471 4185662 - 4185690 + Gr 100 -13.4 -4.13945 | opp_overlap 4185669 CTAACCGCAATATTG CTCATAACTTTC AAAAC GAAAGTTATGAG TTTTAAAGTGAAAGT MADE_03886 4185565 - 4185696 + | hypothetical protein MADE_03887 4186784 - 4185744 - | YvaA TERM 4472 4186430 - 4186451 + g 73 -2.3 -5.26119 | gap 1, opp_overlap 4186419 CAAAGCGCCTATTGT GATAAAC-GC AAA GCTGTTTTTC TTTTGTTTTTGCAAG TERM 4473 4186995 - 4187010 + r 75 -5.4 -4.67552 | overlap 4186997 CTAATACTCTGTGTG GATACG ACAA CGTGTC TTATTTTTTGGTAGG TERM 4474 4186997 - 4187013 + r 74 -3.7 -5.1675 | overlap 4186995 AATACTCTGTGTGGA TACGACA ACG TGTCTTA TTTTTTGGTAGGTCG MADE_03888 4188369 - 4187011 - | bifunctional N-acetyl glucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyl transferase TERM 4475 4187343 - 4187356 + g 74 -3.8 -4.91712 | TCATTTCTACAAAGT TGCC CACTTT GGCA TTTTTCTGCATTACC TERM 4476 4187887 - 4187899 + g 72 -10.5 -2.92449 | ATTAATTTCTTTAAT GGCGC GCT GCGCC TCTGTGGCATCTTTA TERM 4477 4189984 - 4189962 - g 85 -14.2 -3.04144 | TGCCCATGCTGAAGA CGCGCTTTAC CAA GCAAAGCGCG ACGGCAGCAACCTAG MADE_03889 4188637 - 4190022 + | diguanylate cyclase TERM 4478 4190046 - 4190067 + T 77 -10.9 -2.90075 | CAGGTTTAACTTTAA GGCGTTTTC GTTT GAGAACGCC TGTGGTTAACGCCAC MADE_03890 4190910 - 4190026 - | probable transmembrane protein MADE_03891 4191412 - 4190918 - | Methylated DNA-protein cysteine methyltransferase TERM 4479 4191376 - 4191387 + g 82 -7.2 -4.83615 | opp_overlap 4191376 CGCAGACTTCAACGA GCCC TTGG GGGC TTTTTATCGACGCTG MADE_03892 4192841 - 4191414 - | ada regulatory protein TERM 4480 4191670 - 4191660 - G 71 -6.8 -4.05491 | overlap 4191658 4191666 4191667 ATTCAAAAATAAACA GGCA AAC TGCC GCACAGCCTCTTTTC TERM 4481 4193830 - 4193849 + G 75 -10 -3.55444 | CCGTTTTTCTCCCGC TGCTGGCG TAAA CGCTAGCA TTTCAGACATGACCA MADE_03893 4193120 - 4194211 + | putative beta-lactamase TERM 4482 4194189 - 4194229 + T 75 -9.8 -3.33815 | opp_overlap 4194194, overlap 4194194 GGAAGCGCTACTTGA AAAAAGCCGACGCAGCTA ATTAA TAACTGCATCGGCTTTTA TTGGTTAAACCGGCT TERM 4483 4194194 - 4194224 + T 93 -9.7 -4.78572 | opp_overlap 4194194, overlap 4194189 CGCTACTTGAAAAAA GCCGACGCAGCTA ATTAA TAACTGCATCGGC TTTTATTGGTTAAAC TERM 4484 4194224 - 4194194 - T 100 -14.1 -5.0538 | opp_overlap 4194194 4194189 CGCTACTTGAAAAAA GCCGACGCAGCTA ATTAA TAACTGCATCGGC TTTTATTGGTTAAAC MADE_03894 4196171 - 4194252 - | arginine decarboxylase MADE_03895 4196749 - 4196321 - | arginine decarboxylase TERM 4485 4196902 - 4196882 - R 95 -9 -5.47159 | CTTAATAAAGAAAAA GGCCAGCA TTAGG TACTGGCC TTAAAAGACGGAGGT MADE_03896 4198298 - 4196949 - | NAD(P) transhydrogenase subunit beta MADE_03897 4198630 - 4198349 - | probable NAD(P) transhydrogenase subunit alpha MADE_03898 4199790 - 4198633 - | NAD(P) transhydrogenase subunit alpha TERM 4486 4200299 - 4200274 - H 90 -9.7 -4.41616 | ATGCTGCGAAATAAA GCCTTGTGGGG TGCA CACCACAAAGC ACACTAAAATTAACC TERM 4487 4201315 - 4201304 - g 74 -7.2 -4.26903 | CTTATTTGACGAAAA CGGC AATC GCCG CAGTCCGACAGTTGA MADE_03899 4200363 - 4203239 + | TonB-dependent receptor TERM 4488 4203279 - 4203302 + F 83 -11 -3.63367 | overlap 4203279 4203280 TGTTGGCCCCACATT CGTGGCTACC CTTT GGTAGCCACA GTTTTTATTCAGGAA TERM 4489 4203279 - 4203303 + F 93 -10.8 -5.06414 | gap 1, overlap 4203279 4203280 TGTTGGCCCCACATT C-GTGGCTACC CTTT GGTAGCCACAG TTTTTATTCAGGAAC TERM 4490 4203280 - 4203301 + F 93 -14.5 -2.77538 | overlap 4203279 4203279 GTTGGCCCCACATTC GTGGCTACC CTTT GGTAGCCAC AGTTTTTATTCAGGA TERM 4491 4203783 - 4203811 + G 77 -10.3 -3.4285 | opp_overlap 4203775 4203777 AAAAGCATACGCCAC GCAGAGTTTGCAG GCA CCGCAAACTATGC TTATCACTTAGATGC TERM 4492 4204182 - 4204197 + G 71 -6.8 -4.15044 | GGTTTGCAGTCGCGC CGTGGC GTAG GTCACG TTTATTCCAGCAGGC MADE_03900 4203324 - 4204892 + | putative tryptophan halogenase TERM 4493 4204874 - 4204887 + F 77 -9.5 -3.57144 | opp_overlap 4204873 4204872 TAAAATTCACCAATT CGGCC TGCA GGCCG TTTAACAGTAAAACA MADE_03901 4204929 - 4205663 + | SapC related protein TERM 4494 4205688 - 4205667 - g 87 -11.5 -3.84246 | opp_overlap 4205666 4205665 ACTACGAATTAATAA GGGTTGGCG AGAG CGCCACCCC CGTTGTTGTAATTGA TERM 4495 4206321 - 4206309 - g 95 -2.6 -5.81412 | TTGATGTAAAAAAAA GCAG ATTAA CCGC AAATGCCAGTGTTAT MADE_03902 4205642 - 4206343 + | hypothetical protein MADE_03903 4209786 - 4206562 - | TonB-dependent receptor TERM 4496 4209770 - 4209785 + g 72 -9 -3.52307 | overlap 4209784 TTTTGGGGGAGTTTT TGACGC GCCT GCGTCA TTCTACTCTCTGTTG MADE_03904 4209939 - 4210529 + | putative RNA polymerase sigma-70 factor FecI MADE_03905 4210522 - 4211628 + | putative regulatory protein TERM 4497 4212176 - 4212162 - g 90 -10 -4.39426 | GACAGCCCTAGAAAA GATGGC AAT GCCATC CAGCACGACTTCATG MADE_03906 4211805 - 4212551 + | hypothetical protein MADE_03907 4212959 - 4212660 - | peptidyl-prolyl cis-trans isomerase C TERM 4498 4212812 - 4212824 + g 72 -9.1 -3.60475 | GATCGCCGCCACGCT TGCCC GAC GGGCA TTTAGAATGACGCTT MADE_03908 4213921 - 4213025 - | protoheme IX farnesyltransferase (Heme O synthase) TERM 4499 4214093 - 4214074 - R 89 -10 -4.26019 | TAATCACATTGAAAA GCCTGACA TGAT CGTCAGGC TAGACCACGCATATA MADE_03909 4214490 - 4214119 - | cytochrome o ubiquinol oxidase protein (Ubiquinol oxidase chain D) TERM 4500 4214325 - 4214288 - G 81 -12.9 -2.6296 | opp_overlap 4214294, overlap 4214277 4214294 CAAATTTGAACCAAG CCCAAAGTTACCACGCT CCAA ATCGTGGTAACTTTAGA TAGGTCGCCATTCAT TERM 4501 4214294 - 4214319 + g 83 -10.5 -3.6682 | opp_overlap 4214288 4214294 TGAACCAAGCCCAAA GTTACCACGCT CCAA ATCGTGGTAAC TTTAGATAGGTCGCC TERM 4502 4214319 - 4214294 - G 83 -10.5 -3.69434 | opp_overlap 4214294, overlap 4214288 TGAACCAAGCCCAAA GTTACCACGCT CCAA ATCGTGGTAAC TTTAGATAGGTCGCC MADE_03910 4215107 - 4214490 - | cytochrome o ubiquinol oxidase subunit III (Ubiquinol oxidase chain C) MADE_03911 4217092 - 4215104 - | Ubiquinol oxidase polypeptide I MADE_03912 4218036 - 4217095 - | Ubiquinol oxidase polypeptide II (Cytochrome o subunit 2) (Oxidase BO(3) subunit 2) (Cytochrome o ubiquinol oxidase subunit MADE_03913 4218593 - 4218186 - | hypothetical protein TERM 4503 4218405 - 4218394 - G 76 -2.2 -5.27477 | overlap 4218395 AGTGCAATGAAAAAA GGCT CGAA AACC AAGCTTTCATTAAAT TERM 4504 4218515 - 4218531 + g 89 -10.9 -4.17556 | opp_overlap 4218506 ACCACAGCATAGCGC CTACACC ACT GGTGTAG TTTATTGCGGGTCTA TERM 4505 4219017 - 4219045 + H 76 -7.5 -4.17296 | opp_overlap 4219015 4219012, overlap 4219018 GCACGTATAACATCG CTTGGTATATGCC TTT GCCATATACCAAC TTTGTGTATGTAGAA TERM 4506 4219018 - 4219044 + H 79 -11 -3.09896 | opp_overlap 4219015 4219012, overlap 4219017 CACGTATAACATCGC TTGGTATATGCC TTT GCCATATACCAA CTTTGTGTATGTAGA MADE_03914 4219137 - 4219328 + | SpoVT/AbrB-like protein MADE_03915 4219417 - 4219722 + | predicted nucleic acid-binding protein,contains PIN domain TERM 4507 4219798 - 4219788 - T 71 -6.8 -4.06786 | ATGCAATAGGAGAAA GGCT GTT AGCC CATATCGAGAACAAG MADE_03916 4221151 - 4220342 - | hypothetical protein MADE_03917 4221554 - 4222282 + | hypothetical protein TERM 4508 4222607 - 4222577 - T 89 -12 -3.56594 | overlap 4222567 GGAAATGGTGTGAAA CTAACCGTGATACA AAA CGTACCACAGTTAG TCTCAGAAGGCTTGT MADE_03918 4224303 - 4222663 - | Chaperonin GroEL (HSP60 family) protein TERM 4509 4224104 - 4224125 + g 77 -7.3 -4.46112 | TGCGCGCCCATGTTT TCGAACTTG TCTT CAAGCTCGA TTTCTTTCGCTACAG MADE_03919 4224634 - 4224344 - | co-chaperonin GroES TERM 4510 4224877 - 4224854 - R 76 -7.5 -4.14764 | overlap 4224850 4224876 TCTTAAACAAGTAAA CGCCGTTTA TCGTGG TAAACGACG CTAATAACGTGAGTA MADE_03920 4225461 - 4224925 - | fxsA protein TERM 4511 4225050 - 4225040 - G 76 -8.2 -4.08216 | opp_overlap 4225040, overlap 4225041 GGACTCTGTCCAAAA GGGG ATT CCCC CTGATTGAAGCCTGC TERM 4512 4225190 - 4225178 - G 70 -4.8 -4.47456 | ATAGCTAATAAGAAA CCGA AAATG TCGG TAATAAAGCCCGGCG TERM 4513 4225539 - 4225520 - H 73 -7.2 -3.97307 | TGTACGTAATAACAA GAAAAGGT GCCC ACCCTTTC GCTTAATTAGCCACT MADE_03922 4225675 - 4225989 + | periplasmic divalent cation tolerance protein TERM 4514 4226078 - 4226058 - g 77 -8.9 -3.91798 | opp_overlap 4226058 4226059, overlap 4226059 CAATTTTCAAGTAAA TCGGCACCA CTT TGGCGCCGG TTTATTGCACTGATA TERM 4515 4226058 - 4226078 + G 79 -8.9 -4.18934 | opp_overlap 4226058 4226059, overlap 4226059 CAATTTTCAAGTAAA TCGGCACCA CTT TGGCGCCGG TTTATTGCACTGATA TERM 4516 4226059 - 4226077 + G 73 -10.2 -3.10878 | opp_overlap 4226059 4226058, overlap 4226058 AATTTTCAAGTAAAT CGGCACCA CTT TGGCGCCG GTTTATTGCACTGAT TERM 4517 4226077 - 4226059 - g 80 -12.4 -2.94597 | opp_overlap 4226058 4226059, overlap 4226058 AATTTTCAAGTAAAT CGGCACCA CTT TGGCGCCG GTTTATTGCACTGAT TERM 4518 4226980 - 4226967 - g 75 -3.1 -5.16071 | overlap 4226968 AAGTATCAAGAAAAA CTCAC TCAC ATGAG TAACAGCCAAACGCC TERM 4519 4227151 - 4227165 + G 73 -4.2 -4.88918 | TACTGAGTATTGGCA TGGGCG TAC CGCTTA TTTTGTTTGGCATGA MADE_03921 4226013 - 4227908 + | thiol:disulfide interchange protein precursor MADE_03923 4227910 - 4228791 + | peptidase M23B MADE_03924 4229010 - 4229450 + | 3-dehydroquinate dehydratase (3-dehydroquinase) (Type II DHQase) TERM 4520 4229886 - 4229868 - g 74 -10.4 -3.17075 | GTGTGGTTAAGGCAA TCTTGGTT GAA AACCAAGA CCCTGTAGAATTCGA MADE_03925 4229465 - 4229926 + | acetyl-CoA carboxylase MADE_03926 4229941 - 4231284 + | acetyl-CoA carboxylase TERM 4521 4231292 - 4231323 + F 95 -11.7 -4.51799 | TAGCCTAATCCCCCT TTGGGCTACACGG TGTTTT TTGTGTAGCCCAA TTTTCTCCCTTTCAT TERM 4522 4231708 - 4231725 + F 100 -12.7 -5.82388 | TCCCACTCCACTTGT GCCGGCA TCCC TGCCGGC TTTTTTTTGCAATTT MADE_03927 4231824 - 4232762 + | hypothetical protein TERM 4523 4232806 - 4232787 - f 100 -13.6 -5.80003 | TCAACAAATAAAAAA GGCCCATC AAAC GATGGGCC AAACAGCAAGAACGC MADE_03928 4233001 - 4233441 + | hypothetical protein MADE_03929 4233796 - 4233512 - | hypothetical protein TERM 4524 4233735 - 4233713 - G 75 -9.8 -3.54424 | opp_overlap 4233713 4233714 4233729, overlap 4233714 CTCGATTGCTTCAAA CGGCGTGCGA TCT TCCCACGCCA TTTCAATAATGCGTG TERM 4525 4233734 - 4233714 - G 73 -11.1 -2.72511 | opp_overlap 4233713 4233714 4233729, overlap 4233713 TCGATTGCTTCAAAC GGCGTGCGA TCT TCCCACGCC ATTTCAATAATGCGT TERM 4526 4233714 - 4233734 + g 74 -11.1 -2.80975 | opp_overlap 4233714 4233713, overlap 4233713 4233729 TCGATTGCTTCAAAC GGCGTGCGA TCT TCCCACGCC ATTTCAATAATGCGT MADE_03930 4236018 - 4233871 - | DNA polymerase III, epsilon subunit TERM 4527 4234754 - 4234775 + g 73 -10.2 -3.09581 | opp_overlap 4234752 TCTTTGCTATCAAGC GCATCGAG TAAAGT CTCGATGC TATCTTCAAACTTTG TERM 4528 4235033 - 4235044 + g 74 -3.6 -5.00846 | AGCATGTCGGTAACG GTGC TGGT GCGC TTTTTATGATATTTG MADE_03931 4236609 - 4236758 + | hypothetical protein MADE_03932 4236751 - 4237380 + | hypothetical protein TERM 4529 4237462 - 4237493 + F 70 -3.1 -5.00616 | opp_overlap 4237462, overlap 4237489 4237492 AGTTTATTTAATCTA GATCAAAGGAAAA TACGAC TTTTCGTTCGATC TTTTTTCAAAAAGAG TERM 4530 4237550 - 4237533 - f 88 -8.4 -4.70772 | opp_overlap 4237533, overlap 4237528 AGATATGTAATAAAA CCTGCC TCTTTG GGCAGG TTTTTGCGTTTAAAG TERM 4531 4237533 - 4237550 + F 89 -9.1 -4.81249 | opp_overlap 4237533 4237528 AGATATGTAATAAAA CCTGCCT CTTT GGGCAGG TTTTTGCGTTTAAAG MADE_03933 4237616 - 4237909 + | high-potential iron sulfur protein isozyme-2, HiPIP-2 TERM 4532 4237940 - 4237960 + T 100 -15.5 -5.5604 | opp_overlap 4237940 GATAGACGATTGAAA GCCCTCGAT ATT ATCGAGGGC TTTTTTATTGCTTGA TERM 4533 4237960 - 4237940 - T 100 -15.5 -3.70863 | opp_overlap 4237940 GATAGACGATTGAAA GCCCTCGAT ATT ATCGAGGGC TTTTTTATTGCTTGA MADE_03934 4239640 - 4238006 - | amidase TERM 4534 4238488 - 4238516 + g 84 -8.1 -4.56597 | ACTCTCTGGGTGTAG CCTGGTTGAACTC GAT GAGCTCAGACAGG TTTTTAGCGGGAAGC MADE_03935 4240470 - 4239781 - | ABC-type amino acid transport/signal transduction system TERM 4535 4240538 - 4240527 - H 81 -3 -5.62219 | AACACAGTAAAAAAA GTAT ACGC ATAC GGTTCCTATTGGGTT TERM 4536 4240569 - 4240584 + H 70 -2.5 -5.0538 | GAAAACCACACAGCC CGCTT CACTAT AGGCG TTTTTTAACATCGCA MADE_03936 4240756 - 4241634 + | methylation of 50S ribosomal subunit protein L11 (ribosomal protein L11 methyltransferase) TERM 4537 4241667 - 4241688 + F 73 -8.7 -3.65812 | opp_overlap 4241657 4241668, overlap 4241668 GCAAATTTTTACACT ACCGCCTTT TGCG AAAGGCGGC TTGTATTGAAAAAAA TERM 4538 4241668 - 4241687 + F 81 -12.2 -2.79273 | opp_overlap 4241657 4241668, overlap 4241667 CAAATTTTTACACTA CCGCCTTT TGCG AAAGGCGG CTTGTATTGAAAAAA TERM 4539 4241687 - 4241668 - f 81 -12.2 -2.64107 | opp_overlap 4241668 4241667, overlap 4241657 CAAATTTTTACACTA CCGCCTTT TGCG AAAGGCGG CTTGTATTGAAAAAA MADE_03937 4241983 - 4242981 + | tRNA-dihydrouridine synthase B MADE_03938 4243012 - 4243305 + | Factor for inversion stimulation Fis, transcriptional activator TERM 4540 4243348 - 4243331 - f 88 -11.3 -3.72576 | opp_overlap 4243331 GCTTCGCCCACCAAA GAGCACC AATC GGTGCTC TTTTTGTTTCAACAC TERM 4541 4243331 - 4243348 + F 100 -11.3 -5.27335 | opp_overlap 4243331 GCTTCGCCCACCAAA GAGCACC AATC GGTGCTC TTTTTGTTTCAACAC TERM 4542 4244816 - 4244826 + G 74 -6.8 -4.20918 | GCTGGTTCTGTTATG GCGT CTG ACGC TTTCTTCCCATTCCG MADE_03939 4243388 - 4244986 + | bifunctionalphosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase TERM 4543 4245032 - 4245069 + F 76 -7.1 -4.1711 | opp_overlap 4245033, overlap 4245033 4245035 TTAACGCTTTACTAA ACACGCAGTATGC CAATATTTTAAA GCATACTGCGTGC TTTATTCCCCCTCAT TERM 4544 4245068 - 4245033 - f 88 -11.3 -3.737 | opp_overlap 4245032 4245033 4245035 TAACGCTTTACTAAA CACGCAGTATGCC AATATTTTAA AGCATACTGCGTG CTTTATTCCCCCTCA TERM 4545 4245033 - 4245068 + F 79 -10.6 -3.09784 | opp_overlap 4245033, overlap 4245032 4245035 TAACGCTTTACTAAA CACGCAGTATGC CAATATTTTAAA GCATACTGCGTG CTTTATTCCCCCTCA MADE_03940 4245233 - 4246087 + | predicted O-methyltransferase MADE_03941 4246115 - 4247407 + | Phosphoribosylamine-glycine ligase TERM 4546 4247458 - 4247434 - f 80 -10 -3.65828 | opp_overlap 4247438, overlap 4247426 4247435 ATAGAAAGTGCTAAA TGAACGCAGC TTAAC GCTGCGTTCT TACACAATTACATAA TERM 4547 4247457 - 4247435 - f 91 -13.5 -2.78774 | opp_overlap 4247438, overlap 4247434 4247426 TAGAAAGTGCTAAAT GAACGCAGC TTAAC GCTGCGTTC TTACACAATTACATA TERM 4548 4247438 - 4247454 + F 79 -9.4 -3.63569 | opp_overlap 4247435 4247434 4247426 AAAGTGCTAAATGAA CGCAGC TTAAC GCTGCG TTCTTACACAATTAC TERM 4549 4247818 - 4247830 + F 70 -7.7 -3.64905 | overlap 4247816 4247813 TAAGCTCAGGTAGTC CGCTT AAA AAGCG TATTATTTCATTCTA TERM 4550 4247909 - 4247933 + G 76 -4.1 -5.00616 | GCTTGTAGCAGTAGT GGCGAGTACCG CAG CGTGGTTCGCC TTTTTTGCCAAAGAG TERM 4551 4247948 - 4247960 + G 71 -7.7 -3.86944 | opp_overlap 4247946 4247948 CTTTTTTGCCAAAGA GTCTG CTC CAGAC TTTACTGCTTATGCC MADE_03942 4247865 - 4248617 + | uncharacterized FlgJ-related protein TERM 4552 4248733 - 4248712 - T 88 -8.7 -4.80882 | opp_overlap 4248715 ATTGCAGATTAAAAA GGAGTGGCA TTTC TGCGACTCC TTCCAATTACGCGCA MADE_03943 4249549 - 4248788 - | hypothetical protein TERM 4553 4250034 - 4250023 - g 70 -2.2 -4.96848 | gap 1, overlap 4250004 GGGCTTATATAAAAA GC-CC TAT GGCGC TGGTCGATTTAATGG MADE_03944 4249707 - 4250642 + | putative potassium channel protein MADE_03945 4250753 - 4251658 + | phosphoribulokinase MADE_03946 4251797 - 4252915 + | hypothetical protein MADE_03947 4253129 - 4253851 + | osmolarity response regulator MADE_03948 4253950 - 4255284 + | osmolarity sensor protein MADE_03949 4256497 - 4255319 - | osmolarity sensor protein TERM 4554 4255425 - 4255409 - G 72 -6.5 -4.36729 | AGGAATAACCCAAAA CGCCG TGGTAAG CGGCG CAAAGTTTGCCCATA MADE_03950 4259061 - 4256596 - | glycosyl hydrolase, family 31 TERM 4555 4257180 - 4257166 - G 72 -5.6 -4.45117 | overlap 4257168 CACAGGTGAAACAAA CAGGGC ATC GCCCCA CATATAGCTTTTTGC TERM 4556 4257178 - 4257168 - G 72 -8.2 -3.82628 | overlap 4257166 CAGGTGAAACAAACA GGGC ATC GCCC CACATATAGCTTTTT TERM 4557 4258387 - 4258363 - G 72 -6.4 -4.36914 | GCCTTTGGCAGAAAA CAACAGTTCG TCGGG CGTACTGCTG CCCATATCAAGCTCA TERM 4558 4259251 - 4259232 - R 100 -10.7 -5.28176 | TTCAGCCATAAAAAA GCCCGCA ACACGG TGCGGGC AAAACATCAATCACG MADE_03951 4260867 - 4259305 - | phosphoenolpyruvate carboxykinase TERM 4559 4260431 - 4260441 + g 72 -8.2 -3.68265 | TTTAAGATTTGCCAC GGCG TAT CGCC TTTAACATTCCATTT TERM 4560 4260716 - 4260731 + g 72 -9 -3.53224 | opp_overlap 4260698 TCATTGGGAGAGCGA CCGGTA CGCT TACCGG TTTCAACAACAAGTG TERM 4561 4261122 - 4261112 - g 79 -2.6 -5.41746 | AAGCGGGCAAAAAAA TTTA AAA TAAA GAGTGAAAACTTTCA MADE_03952 4261073 - 4261195 + | hypothetical protein MADE_03953 4262256 - 4261357 - | Hsp33-like chaperonin MADE_03954 4262684 - 4262280 - | heat shock protein 15 TERM 4562 4262838 - 4262850 + G 73 -7.7 -4.03234 | opp_overlap 4262838 AATAGACCCAACCCA CAACC TCT GGTTG TTTATCTAAGCCAGC MADE_03955 4262814 - 4263737 + | general secretion pathway protein C TERM 4563 4263798 - 4263788 - f 75 -5.4 -4.7497 | GGTAGGCATTAAAAA TTGC AAC GCAA ACCAGCCATCGACAA MADE_03956 4263837 - 4265882 + | general secretion pathway protein D TERM 4564 4266084 - 4266069 - g 77 -6.8 -4.54047 | opp_overlap 4266069 4266078 GTATTTTACAGAAAA CACGCC GTTT GACGTG TTTGCAGAAGTGCGT TERM 4565 4267157 - 4267137 - g 72 -5.3 -4.64766 | overlap 4267139 CCCAGACTGTAAAAA GCCGCATAC GCC GGATGCGTC TGAACTTGAAATATT MADE_03957 4265884 - 4267443 + | Type II secretory pathway, ATPase PulE-like protein TERM 4566 4268199 - 4268215 + G 72 -6.5 -4.20354 | opp_overlap 4268192 4268190 AAAGCATATGAAGCT GCGCTAT CAC AAAGCGC TTTTAACCTTACCTT MADE_03958 4267444 - 4268670 + | general secretion pathway protein F MADE_03959 4268670 - 4269107 + | general secretion pathway protein G TERM 4567 4269581 - 4269571 - g 72 -3.2 -4.95167 | CAACGAAGAAGAAAA GAAG CTT CCTC CCCCACAAATTCTCA MADE_03960 4269113 - 4269739 + | putative general secretion pathway protein H precursor MADE_03961 4269736 - 4270215 + | general secretion pathway protein I MADE_03962 4270217 - 4270843 + | general secretion pathway protein J TERM 4568 4271865 - 4271878 + G 73 -9.5 -3.42459 | overlap 4271862 CGTGTTTCACGCTAG CGCCG ATAG CGGCG TTAATGTTGTGAATC MADE_03963 4270840 - 4271916 + | putative general secretion pathway protein MADE_03964 4271916 - 4273115 + | general secretion pathway protein L TERM 4569 4273252 - 4273277 + G 72 -5.3 -4.56914 | opp_overlap 4273247 4273252, overlap 4273256 TTTAGACAAACAGAA GCAGCTGCTTG ATAA CCAGCAGTCGC TTTTAGTTTGGGTAA MADE_03965 4273112 - 4273591 + | general secretion pathway protein M TERM 4570 4273615 - 4273629 + G 84 -4.9 -5.38549 | opp_overlap 4273615 GTTAGTTGGATAATA GGCGG CATTC TCGCC TTTTTATTGTTTGCC MADE_03966 4273588 - 4274352 + | putative general secretion pathway protein N MADE_03967 4274444 - 4275877 + | hypothetical protein TERM 4571 4275988 - 4275968 - T 100 -16.9 -5.95539 | opp_overlap 4275968 GCCTAAATAAAAAAA CGGGCACGT AAT ACGTGCCCG TTTTTAATTAACGAT TERM 4572 4275968 - 4275988 + T 100 -16.9 -4.86621 | opp_overlap 4275968 GCCTAAATAAAAAAA CGGGCACGT AAT ACGTGCCCG TTTTTAATTAACGAT MADE_03968 4277408 - 4276020 - | succinate-semialdehyde dehydrogenase TERM 4573 4276519 - 4276532 + g 76 -8.1 -4.05875 | TCGGTATTCTCATCG GTGGG GTCG CCCAC TTTAAGTTTTTTACA TERM 4574 4277662 - 4277636 - R 76 -4.4 -5.16151 | opp_overlap 4277636 TAAACCCAAGAAAAA CTCACCATTATC GAA GATGTTAGTGAG TTTTCGGTGAATTCC MADE_03969 4278320 - 4277739 - | hypothetical protein MADE_03970 4278966 - 4278298 - | HAD-superfamily hydrolase, subfamily IA, variant 3 family protein MADE_03971 4279083 - 4279646 + | NTP pyrophosphohydrolase, NUDIX family protein MADE_03972 4279649 - 4280494 + | 3-Phosphoadenosine 5-phosphosulfate (PAPS) 3-phosphatase MADE_03973 4280622 - 4281206 + | YceI family protein TERM 4575 4281332 - 4281302 - T 91 -13.5 -2.64472 | opp_overlap 4281302 4281309, overlap 4281309 TATTTCGTAAAGGTA CAAAAAACCGCAC TTTAT GTGCGGTTTTTTA ATTCTCGAAACAAAA TERM 4576 4281302 - 4281332 + T 79 -11.3 -2.57132 | opp_overlap 4281302 4281309, overlap 4281309 TATTTCGTAAAGGTA CAAAAAACCGCAC TTTAT GTGCGGTTTTTTA ATTCTCGAAACAAAA TERM 4577 4281325 - 4281309 - T 100 -9.4 -5.33866 | opp_overlap 4281302 4281309, overlap 4281302 TAAAGGTACAAAAAA CCGCAC TTTAT GTGCGG TTTTTTAATTCTCGA TERM 4578 4281309 - 4281325 + T 100 -9.4 -5.32944 | opp_overlap 4281309 4281302, overlap 4281302 TAAAGGTACAAAAAA CCGCAC TTTAT GTGCGG TTTTTTAATTCTCGA MADE_03974 4283347 - 4281353 - | putative glucosyltransferase for synthesis of periplasmic glucans TERM 4579 4281690 - 4281674 - G 76 -5.1 -4.86731 | overlap 4281653 TGGCGTGAAATAAAA CGTGG TTACGCC CCACG CCACTGCTAGACAAC TERM 4580 4283251 - 4283274 + g 73 -7.4 -4.13767 | gap 1, opp_overlap 4283251 CTTTTAATATGAAAT GTGAC-CCGCG TTT TGCGGTGTCGC TTTTAACCTGAGGCA MADE_03975 4284959 - 4283328 - | periplasmic glucans biosynthesis protein TERM 4581 4284959 - 4284947 - G 88 -3.3 -5.65496 | overlap 4284948 TATTAAAAATAAAAA CTGGC TTA GCCAT CCGTCCTCTCCTTAT MADE_03976 4285711 - 4286265 + | outer membrane protein, porin family TERM 4582 4286289 - 4286308 + T 100 -11.4 -5.25893 | CTCCTCAGGTAGGTT GCCGGGTT GCTC GACCCGGC TTTTTTGGTATCTAT MADE_03977 4286553 - 4286320 - | hypothetical protein MADE_03978 4287638 - 4286604 - | alpha/beta hydrolase fold TERM 4583 4286668 - 4286658 - G 74 -6.8 -4.24342 | GGCTTCACTAACAAA GCGT TTC ACGC GGTCATGCAGCCAAA TERM 4584 4286902 - 4286917 + g 72 -8.2 -3.77808 | opp_overlap 4286902 TGAGCGTCTGCGAAA CCGTGC AGTG GCGCGG TTATCTTCTCGTCAA TERM 4585 4287584 - 4287598 + g 86 -4.2 -5.51353 | TTTTCGCCCATCCCG GCACCT TAA AGCTGC TTTTTATTATTTTTC MADE_03979 4288161 - 4287658 - | hypothetical protein MADE_03980 4290100 - 4288148 - | ABC transporter ATP-binding protein TERM 4586 4288339 - 4288349 + g 74 -6.8 -4.20106 | CTACGTCTGCAAGTT GTGC ACT GCAC TTTTCCATGGCCTTT TERM 4587 4288630 - 4288614 - G 73 -2.2 -5.2015 | TCAACAAGATAAAAA TCTTCG CACAC CGATGA CAATAGGAAGCGGTC MADE_03981 4290219 - 4290425 + | predicted nucleic-acid-binding protein containing an-ribbon domain MADE_03982 4290606 - 4291715 + | hypothetical protein TERM 4588 4291736 - 4291766 + T 90 -12.6 -3.6959 | overlap 4291737 CTGAGGGGAATTTCA TCGGTTAGGCCTCT GCA AGAGCCCTAACCGC TTTAGATGGTACTAT TERM 4589 4291737 - 4291765 + T 100 -16.1 -2.81272 | overlap 4291736 TGAGGGGAATTTCAT CGGTTAGGCCTCT GCA AGAGCCCTAACCG CTTTAGATGGTACTA MADE_03983 4291936 - 4291778 - | hypothetical protein MADE_03984 4292201 - 4291953 - | SlyX MADE_03985 4293173 - 4292211 - | WD-40 repeat protein TERM 4590 4292688 - 4292702 + g 81 -5 -5.1356 | opp_overlap 4292688 TCCGTTAGGTGAAAT GTCGAT TGA ATTGAC TTTTTCTTGATGGCC TERM 4591 4293470 - 4293450 - g 72 -5.3 -4.64766 | overlap 4293453 CTGATAGTGCAAAAA CAACTGCTG TTG CAGCAGAAG AAATGACAGATACGC TERM 4592 4293467 - 4293453 - g 90 -10 -4.43351 | overlap 4293450 ATAGTGCAAAAACAA CTGCTG TTG CAGCAG AAGAAATGACAGATA TERM 4593 4293517 - 4293491 - g 100 -13 -4.73448 | opp_overlap 4293485, overlap 4293494 ACAGATACGCAAAAA CAAGCTTACGCC ATG GGCGCAAGCATG GGTCTGTTCGTAAGC TERM 4594 4293514 - 4293494 - g 100 -13.3 -4.46215 | opp_overlap 4293485, overlap 4293491 GATACGCAAAAACAA GCTTACGCC ATG GGCGCAAGC ATGGGTCTGTTCGTA TERM 4595 4293578 - 4293557 - g 83 -9.5 -4.15654 | overlap 4293548 GAACAACAAGAACAA CTTGGCCTA ACGC TAGACCAAG ACGCGCTACAACAAG MADE_03986 4293341 - 4294126 + | putative periplasmic peptidyl-prolyl cis-trans isomerase TERM 4596 4294150 - 4294168 + T 100 -16 -4.70107 | opp_overlap 4294150 TTTAGAAAAGAGAAA GCCGACGC ATA GCGTCGGC TTTGTTGTTTTAGTG TERM 4597 4294168 - 4294150 - T 100 -16 -4.51238 | opp_overlap 4294150 TTTAGAAAAGAGAAA GCCGACGC ATA GCGTCGGC TTTGTTGTTTTAGTG TERM 4598 4294401 - 4294413 + T 71 -6.9 -4.13648 | overlap 4294395 AGGTTTTAACGCTGA GGCGC ACG GCGTC TTTCTGTGTGCACTT MADE_03987 4294642 - 4294391 - | hypothetical protein TERM 4599 4294953 - 4294935 - g 72 -8.8 -3.52204 | overlap 4294918 TTACTCGCAAAGTAA CCTGGGCT GCC AGCCTAGG CGATAGAAGTGAGAA MADE_03988 4294835 - 4295320 + | transcription elongation factor GreB TERM 4600 4295384 - 4295402 + F 86 -10.3 -3.97622 | GACTTCCCCTACACC GCGGTGA TATAC TCACCGC TTCTGTTTTCACTAC TERM 4601 4296150 - 4296135 - g 70 -2.5 -4.98672 | GCGAAAAATATAAAA CGGTA CCCTCT CACCG CGCCCTTGCTATGTT MADE_03989 4295498 - 4297864 + | Transcriptional accessory protein TERM 4602 4297892 - 4297913 + F 100 -14.5 -5.63517 | opp_overlap 4297892 TTTTCTAATCAAAAA GAGCCTGCT TTAA AGCAGGCTC TTTTTTATTTCAAGC TERM 4603 4297913 - 4297892 - f 100 -14.5 -4.8622 | opp_overlap 4297892 TTTTCTAATCAAAAA GAGCCTGCT TTAA AGCAGGCTC TTTTTTATTTCAAGC MADE_03990 4298157 - 4299935 + | peptidase C1A, papain MADE_03991 4300985 - 4300002 - | hypothetical protein MADE_03992 4301314 - 4301000 - | hypothetical protein TERM 4604 4301477 - 4301453 - R 79 -8.6 -4.0031 | AGCTGTACGAAATAA GCTCCTGATT ATAAA AGTCAGGAGC GCAATTCATGCCAGT MADE_03993 4302306 - 4301497 - | putative bioH protein MADE_03994 4302406 - 4303119 + | ComF MADE_03995 4305847 - 4303190 - | Peptidase M14, carboxypeptidase A TERM 4605 4305963 - 4305941 - H 80 -10.7 -3.38088 | opp_overlap 4305940 4305939 4305943 AATTTATTTAATTAA TACCTGACT GTTTT AGTCAGGTA AATTTGTTACAATAA TERM 4606 4305943 - 4305961 + H 71 -9.6 -2.76093 | opp_overlap 4305941, overlap 4305940 4305939 TTTATTTAATTAATA CCTGACTG TTT TAGTCAGG TAAATTTGTTACAAT MADE_03996 4306009 - 4306587 + | yhgI protein TERM 4607 4306666 - 4306676 + G 77 -6.8 -4.48987 | opp_overlap 4306665 4306666 GCAACGATTTAAAAT GGGT CTC ACCC TTTTCGTTGTCGGCG MADE_03997 4306622 - 4306852 + | hypothetical protein MADE_03998 4307061 - 4307759 + | aspartate racemase TERM 4608 4307894 - 4307914 + G 72 -5.3 -4.72272 | overlap 4307895 4307896 ATGCCGTTTTAGGCG TACTGGGCT ACG AGCCCGGGG TTTTTGATGAACACG MADE_03999 4307821 - 4308204 + | glyoxalase/bleomycin resistance protein/dioxygenase TERM 4609 4308257 - 4308215 - T 73 -5.6 -4.62471 | gap 1, opp_overlap 4308217 4308218, overlap 4308217 4308218 4308221 TGTAACGGTTAAAAA TATTAAGCCTGCCGA-GGC TTCATT GCCATCTGCAGGCTTAGTT ATACGTTTTACTACC TERM 4610 4308255 - 4308217 - T 73 -8.2 -3.92577 | gap 1, opp_overlap 4308217 4308218, overlap 4308215 4308218 4308221 TAACGGTTAAAAATA TTAAGCCTGCCGA-GGC TTCATT GCCATCTGCAGGCTTAG TTATACGTTTTACTA TERM 4611 4308217 - 4308255 + T 79 -10.4 -3.53184 | gap 1, opp_overlap 4308217 4308215 4308218 4308221, overlap 4308218 TAACGGTTAAAAATA TTAAGCCTGCCGA-GGC TTCATT GCCATCTGCAGGCTTAG TTATACGTTTTACTA TERM 4612 4308254 - 4308218 - T 82 -11.7 -2.94823 | gap 1, opp_overlap 4308217 4308218, overlap 4308217 4308215 4308221 AACGGTTAAAAATAT TAAGCCTGCCGA-GGC TTCATT GCCATCTGCAGGCTTA GTTATACGTTTTACT TERM 4613 4308218 - 4308254 + T 81 -11.7 -2.71188 | gap 1, opp_overlap 4308218 4308217 4308215 4308221, overlap 4308217 AACGGTTAAAAATAT TAAGCCTGCCGA-GGC TTCATT GCCATCTGCAGGCTTA GTTATACGTTTTACT TERM 4614 4308251 - 4308221 - T 74 -9 -3.60925 | gap 1, opp_overlap 4308218 4308217, overlap 4308218 4308217 4308215 GGTTAAAAATATTAA GCCTGCCGA-GGC TTCATT GCCATCTGCAGGC TTAGTTATACGTTTT MADE_04000 4309542 - 4308268 - | Na(+) driven multidrug efflux pump TERM 4615 4308510 - 4308499 - G 71 -3.6 -4.86001 | ACCATCGTATAAAAA GCAC CAGT GCGC CAACAAGGGAAGTAA MADE_04001 4309739 - 4309623 - | hypothetical protein MADE_04002 4309765 - 4310940 + | Polysaccharide deacetylase family protein TERM 4616 4310999 - 4310967 - T 73 -8.5 -3.68024 | opp_overlap 4310942 4310970, overlap 4310951 4310964 4310970 TGTTTTAACATACAA CAAGGGCTGCTAT GTATATT AAAGCAGCCCTTA CATAACGAATGGTTT TERM 4617 4310996 - 4310970 - T 75 -8 -3.97043 | opp_overlap 4310942 4310970, overlap 4310964 4310967 TTTAACATACAACAA GGGCTGCTAT GTATATT AAAGCAGCCC TTACATAACGAATGG MADE_04003 4311604 - 4311017 - | GCN5-related N-acetyltransferase MADE_04004 4312250 - 4311606 - | uncharacterized secreted protein of SCO1/SenC/PrrC family TERM 4618 4311940 - 4311929 - G 72 -3 -5.07275 | overlap 4311934 CCACAGATACAAAAA CAAT GCGA ATTG GTTCGACGCTATTTA MADE_04005 4313164 - 4312247 - | protoheme IX farnesyltransferase MADE_04006 4314221 - 4313157 - | cytochrome oxidase assembly MADE_04007 4314877 - 4314374 - | hypothetical protein MADE_04008 4315610 - 4314906 - | transmembrane cytochrome oxidase complex biogenesis factor TERM 4619 4314962 - 4314942 - G 76 -8.9 -3.67976 | overlap 4314955 CTTACTAATTGCAAA GCCGCCAAT AGC AGCGGCGGC TATGGCTAAACCAAA MADE_04009 4315695 - 4315865 + | hypothetical protein TERM 4620 4315873 - 4315843 - T 81 -12 -2.71364 | opp_overlap 4315842 4315843 GTACCGGCTTAATTA CCCCAAACCCAA GGCCTTA TTGAGTTTGGGG CTTCTTGCTTTATAG TERM 4621 4315843 - 4315873 + T 72 -9.8 -2.95317 | opp_overlap 4315843, overlap 4315842 GTACCGGCTTAATTA CCCCAAACCCAA GGCCTTA TTGAGTTTGGGG CTTCTTGCTTTATAG MADE_04010 4316776 - 4315883 - | Cytochrome c oxidase subunit III MADE_04011 4317387 - 4316800 - | cytochrome C oxidase assembly protein TERM 4622 4317339 - 4317359 + g 70 -2.5 -5.05116 | opp_overlap 4317339 ACATGCCGATAACAA TGGCGATAA GCT TGATCACCA TTTTGTTGTTTGTAC MADE_04012 4319141 - 4317528 - | cytochrome c oxidase, subunit I MADE_04013 4320314 - 4319151 - | Cytochrome c oxidase, subunit II TERM 4623 4320874 - 4320859 - R 85 -3.9 -5.68039 | opp_overlap 4320859 AAAGGCACAAAAAAA GCGGC TAATGC ACCGC TTTTGATCAAAGAAG MADE_04014 4321524 - 4320898 - | LexA repressor TERM 4624 4322869 - 4322888 + G 71 -3.4 -4.7497 | opp_overlap 4322870, overlap 4322870 4322873 4322874 GGCCCGTAGGTAAAA TGTTCCGC CGTG GCGGTGCG TTTTTCCTGCGTCGC MADE_04015 4321833 - 4324289 + | glycerol-3-phosphate acyltransferase TERM 4625 4324326 - 4324345 + T 100 -13.6 -5.26918 | opp_overlap 4324326 ATCAAAACGTAAAAA GCCCATGC TGCT GCATGGGC TTTTTTGTGCACTCT TERM 4626 4324345 - 4324326 - T 100 -13.6 -4.88222 | opp_overlap 4324326 ATCAAAACGTAAAAA GCCCATGC TGCT GCATGGGC TTTTTTGTGCACTCT TERM 4627 4324516 - 4324497 - T 77 -7.8 -4.21936 | opp_overlap 4324497 4324490 4324503, overlap 4324489 GCGATAACTTGAAAA GCCAAGCG CCTG CGCTCAGC GTTTTAATTTAGGCG MADE_04016 4326072 - 4324525 - | threonine dehydratase MADE_04017 4327811 - 4326072 - | dihydroxy-acid dehydratase TERM 4628 4326109 - 4326142 + g 80 -12.5 -3.11768 | gap 1 ACATCGCGCACTGCA CCTTTGTCGGCACTGG TTG CCAGCGCTG-CAAAGG TCTTGAGTGATGTAG MADE_04018 4327914 - 4329113 + | dihydroxy-acid dehydratase MADE_04019 4329122 - 4329604 + | competence protein ComM MADE_04020 4330496 - 4329624 - | transcriptional regulator ilvY MADE_04021 4330654 - 4332132 + | ketol-acid reductoisomerase TERM 4629 4332184 - 4332204 + T 100 -16.9 -5.76237 | TAACTAAGCCCTCTT GCCCGACCA TTT TGGTCGGGC TTTTTTATTTCTATA MADE_04022 4333533 - 4332283 - | bicyclomycin resistance protein TERM 4630 4332407 - 4332395 - G 72 -2.7 -5.08824 | overlap 4332396 TTTCCATTCAAAAAA CTATC AAC GATAA GGGCAACGGGCACCG TERM 4631 4333591 - 4333573 - R 100 -11.7 -4.8622 | opp_overlap 4333573 GTGGGGAAGTAAAAA GGCGCGA AATAA TCGCGCC TATATAAGTGTACCT TERM 4632 4333573 - 4333591 + r 82 -11.7 -2.9356 | opp_overlap 4333573 GTGGGGAAGTAAAAA GGCGCGA AATAA TCGCGCC TATATAAGTGTACCT MADE_04023 4333859 - 4333674 - | peptidase S9, prolyl oligopeptidase active site region TERM 4633 4335836 - 4335868 + G 79 -10.6 -3.54129 | gap 1, opp_overlap 4335806, overlap 4335832 CCTATAGCGTTGGCC CGGGTGTCCATTGGC TTTC GCCAATCGGC-CCCG TTCGTCTTTATGTTG MADE_04024 4334110 - 4335948 + | surface antigen D15 TERM 4634 4337680 - 4337700 + G 89 -11.1 -4.0162 | opp_overlap 4337675 4337688 CTTGGCAAAACCCTC GCGCAAACG GCG CGTTAGCGC TTTCTGATATCACCG TERM 4635 4338177 - 4338165 - g 81 -3.3 -5.3658 | AGTATAAAAACAAAA GGGAG TTA CTCAC AGCAAGACCCTATAG MADE_04025 4335945 - 4339853 + | hypothetical protein TERM 4636 4339876 - 4339861 - T 70 -8.2 -3.66178 | opp_overlap 4339863 TGTTTTAAGCTGAAA CAGCGC CTCG GCGCCG CCTTTAGTGCTGCTG MADE_04026 4340500 - 4339880 - | hypothetical protein TERM 4637 4339907 - 4339930 + g 100 -8.2 -5.32599 | overlap 4339924 CGCCATAGCTTCCAG CGTTTTGAGT TGTC GCTCAAAGCG TTTTTGTCTTTTGTG MADE_04027 4341005 - 4340493 - | RNA polymerase sigma factor, sigma-70 family protein MADE_04028 4341320 - 4341541 + | hypothetical protein MADE_04029 4342490 - 4341588 - | membrane protein MADE_04030 4343430 - 4342498 - | 2-hydroxyacid dehydrogenase TERM 4638 4343563 - 4343535 - R 83 -3.1 -5.63517 | opp_overlap 4343539 4343544, overlap 4343536 TTTTGAAATAAAAAA GGAATCACATTGC CTC GCAAATTGATTCT AGGGCCGCTTTAACG TERM 4639 4343562 - 4343536 - R 71 -6.6 -3.97026 | opp_overlap 4343539 4343544, overlap 4343535 TTTGAAATAAAAAAG GAATCACATTGC CTC GCAAATTGATTC TAGGGCCGCTTTAAC MADE_04031 4343976 - 4343539 - | thioesterase family protein domain protein MADE_04032 4345207 - 4344110 - | gamma-glutamyl kinase MADE_04033 4345402 - 4347867 + | putative Zn-dependent aminopeptidase TERM 4640 4347877 - 4347921 + F 70 -9.3 -3.16151 | gap 1, overlap 4347875 4347873 4347879 4347881 GAGTAAGTTGTCTTT GACCCGCCTGCA-GCAGAGC CCTCGT GCTCTGCTTGCAAGCGTGTG TATGTTCATGCTTAC TERM 4641 4347879 - 4347919 + F 83 -11.9 -3.13565 | gap 1, overlap 4347877 4347875 4347873 4347881 GTAAGTTGTCTTTGA CCCGCCTGCA-GCAGAGC CCTCGT GCTCTGCTTGCAAGCGTG TGTATGTTCATGCTT TERM 4642 4347881 - 4347917 + F 91 -13.1 -3.11951 | gap 1, overlap 4347879 4347877 4347875 4347873 AAGTTGTCTTTGACC CGCCTGCA-GCAGAGC CCTCGT GCTCTGCTTGCAAGCG TGTGTATGTTCATGC MADE_04034 4347923 - 4348441 + | putative orphan protein MADE_04035 4348631 - 4349038 + | hypothetical protein MADE_04036 4349297 - 4350664 + | ABC-1 protein MADE_04037 4350987 - 4350679 - | Na(+)-translocating NADH-quinone reductase subunit B TERM 4643 4350916 - 4350897 - G 74 -5.8 -4.59089 | gap 1 CAATTGATAAATAAA CGAGATAGA CAT TC-ATCTCG TAAGACTGAACCTCT TERM 4644 4351116 - 4351100 - R 76 -6.6 -4.44211 | GGCAATATAAAACAA CGCTTA TACGC TAAGCG AGGTTTTCAGGTTCA MADE_04038 4351619 - 4351110 - | hypothetical protein TERM 4645 4351560 - 4351575 + g 75 -3.2 -5.15634 | opp_overlap 4351560, overlap 4351562 ACACCTCACGACAAA TTCGCT AAAA AGCGCA TTTTTTCGTGCAATA TERM 4646 4351721 - 4351706 - H 81 -7.6 -4.56597 | opp_overlap 4351697 4351706 4351705 4351708 TTTTCTCCCTAAAAA TAAGGG TTTC CCCTTA ATTGATGAATAAAAC MADE_04039 4351884 - 4352729 + | putative orphan protein TERM 4647 4353060 - 4353019 - g 84 -8.7 -4.67234 | opp_overlap 4353025, overlap 4352990 4353025 ACTCAATGGCAAAAA GAAAAAGGCGAACGCACCG ATGA CGACGTGTTCACCTTTACC ACGCAAACCGGTGAC TERM 4648 4353054 - 4353025 - g 100 -8.5 -5.61881 | opp_overlap 4353025, overlap 4352990 4353019 TGGCAAAAAGAAAAA GGCGAACGCACCG ATGA CGACGTGTTCACC TTTACCACGCAAACC MADE_04040 4352731 - 4353315 + | hypothetical protein MADE_04041 4353469 - 4354761 + | Xaa-Pro dipeptidase family enzyme TERM 4649 4355173 - 4355201 + G 74 -5.9 -4.64861 | TTGCCATGCTCGCAG CAGGGGCGACGAA ATT TTCGCTACCTCTG TTTCTTTTAGCGACC MADE_04042 4354788 - 4355375 + | DedA family protein BAL199 TERM 4650 4355773 - 4355744 - g 86 -4.2 -5.47159 | opp_overlap 4355772 TCGAATAAAGAAAAA GCCATACAAGAG GATGTG CTCGCGTTTGGC ACCATGGGCATGTAT TERM 4651 4355835 - 4355821 - g 100 -7.8 -5.6473 | ACAAGAGCAAAAAAA GCGTGA GGC CCACGC CATATTGCAAGAGTG MADE_04043 4355555 - 4355992 + | hypothetical protein MADE_04044 4356011 - 4356202 + | hypothetical protein TERM 4652 4356826 - 4356838 + G 76 -4.9 -4.86731 | overlap 4356833 TACCTATACCACCGA CTTTT TAG AAAAG TTTTCTTTACCCGCG MADE_04045 4356314 - 4357117 + | hypothetical protein TERM 4653 4357153 - 4357130 - T 88 -8.1 -5.12617 | opp_overlap 4357133, overlap 4357133 TAACGATTTAAAAAA GAAGGGCGC CTATTC GCGCCCTTT CTTTATAACGTATTG TERM 4654 4357150 - 4357133 - T 91 -9.8 -4.64763 | opp_overlap 4357133, overlap 4357130 CGATTTAAAAAAGAA GGGCGC CTATTC GCGCCC TTTCTTTATAACGTA TERM 4655 4357133 - 4357150 + T 91 -9.8 -4.56367 | opp_overlap 4357130 4357133 CGATTTAAAAAAGAA GGGCGC CTATTC GCGCCC TTTCTTTATAACGTA MADE_04046 4357399 - 4357139 - | sirA protein MADE_04047 4358030 - 4357389 - | orotate phosphoribosyltransferase MADE_04048 4358765 - 4358052 - | RNase PH (tRNA nucleotidyltransferase) MADE_04049 4358785 - 4358949 + | hypothetical protein TERM 4656 4359012 - 4359030 + F 81 -7.4 -4.61527 | opp_overlap 4359015 CGATTTTCACGTATA CAACACGA CGT TCGGGTTG TTTTTGCAGGCTTTT MADE_04050 4359066 - 4359929 + | hypothetical protein TERM 4657 4360409 - 4360372 - g 73 -11.3 -2.60763 | overlap 4360371 GGCAGACGCCAGAAT TGCCGCCGCATACTTTC GAAA GGAAGTACGTGACGGCA TAGATCCTCTTCTGG TERM 4658 4361005 - 4361020 + G 72 -9 -3.57561 | CATTTCCTTACCACG CCAAGC CATT GCTTGG TTTAACGAGTTGCAA MADE_04051 4360175 - 4361422 + | site-specific recombinase, phage integrase family protein TERM 4659 4361426 - 4361440 + T 70 -8.6 -3.31144 | opp_overlap 4361426 4361425 4361429 GGCTTTCGCTAAAAC TCACGT TCT ACGTGA TTGTCAGCCTAGGAC MADE_04052 4362756 - 4361554 - | HipA-like protein TERM 4660 4361824 - 4361853 + g 77 -9.3 -3.91897 | gap 1 CGAGACAAAGTCATA GGCAGGCGCGATCG ATG CGGT-GCGCTTGTC TTTGTAAATCACAGA MADE_04053 4363096 - 4362776 - | Transcriptional Regulator, XRE family protein TERM 4661 4363408 - 4363394 - H 89 -10 -4.17089 | GCCAAACTTGCAAAA GTCCCA AAT TGGGAC TAACATCTGTTTATG MADE_04054 4363421 - 4363723 + | hypothetical protein MADE_04055 4363753 - 4364124 + | Helix-turn-helix motif TERM 4662 4364231 - 4364212 - g 76 -8.6 -4.11394 | opp_overlap 4364224 AGCTGAGCTTGAAAA CGAAAAGC AGCA GCTTCTCG CATTAAGAGAGGCTT MADE_04056 4364150 - 4366540 + | DNA helicase of superfamily II MADE_04057 4366709 - 4366593 - | hypothetical protein MADE_04058 4367007 - 4367708 + | hypothetical protein TERM 4663 4367802 - 4367827 + T 73 -8.3 -3.68024 | TTGGCTCGTGGCTGC GCCTCAGTC GCCGTTAA GACTGGGGC TTATCTCTTACAAAC TERM 4664 4368057 - 4368082 + T 100 -16.3 -2.71268 | opp_overlap 4368055, overlap 4368054 TTTCCTGAAATTACC TGGTACCGACA TAAA TGTCGGTACCA TCCTCTATAATAAAA MADE_04059 4371363 - 4368106 - | DEAD/DEAH box helicase domain protein MADE_04060 4372151 - 4371360 - | hypothetical protein MADE_04061 4374287 - 4372176 - | type I restriction-modification system methyltransferase subunit TERM 4665 4373663 - 4373644 - G 75 -2.8 -5.26875 | gap 1, overlap 4373647 4373648 GCTTCAACCAAAAAA CCACCCGTG CCG CA-GGCTGG GTCCAATACGGACTC MADE_04062 4376728 - 4374338 - | type I site-specific restriction-modification system, R (restriction) subunit TERM 4666 4375485 - 4375460 - G 90 -9.9 -4.52589 | gap 1, opp_overlap 4375438 4375456 4375461 4375462, overlap 4375462 TTGGTCGACACAAAA CACGATCGTTTT TGC AAAACGATCG-G TTCGTTTCATAAAGT TERM 4667 4375461 - 4375485 + g 75 -10.1 -3.56972 | opp_overlap 4375460 4375462, overlap 4375438 4375456 4375462 TGGTCGACACAAAAC ACGATCGTTTT TGC AAAACGATCGG TTCGTTTCATAAAGT TERM 4668 4375484 - 4375462 - G 100 -13.6 -3.87627 | opp_overlap 4375438 4375461 4375456 4375462, overlap 4375460 GGTCGACACAAAACA CGATCGTTTT TGC AAAACGATCG GTTCGTTTCATAAAG TERM 4669 4375462 - 4375484 + g 83 -13.6 -2.73701 | opp_overlap 4375462 4375460, overlap 4375438 4375461 4375456 GGTCGACACAAAACA CGATCGTTTT TGC AAAACGATCG GTTCGTTTCATAAAG MADE_04063 4376927 - 4376730 - | VrlI like protein MADE_04064 4378919 - 4377177 - | inner membrane protein MADE_04065 4379148 - 4378906 - | phage transcriptional regulator, AlpA MADE_04066 4379687 - 4379941 + | predicted transcriptional regulator MADE_04067 4380382 - 4381554 + | SAM-dependent methyltransferase MADE_04068 4382685 - 4381564 - | hypothetical protein TERM 4670 4382526 - 4382501 - G 73 -4.1 -4.8048 | TCGGCATAGTAAAAA CCGATATCAAA GTAT TTTAACATCAG CTCAAAAGGCTCTGC MADE_04069 4384014 - 4382740 - | HipA domain protein TERM 4671 4383114 - 4383058 - G 72 -5.3 -4.56775 | gap 2, opp_overlap 4383051 4383060 ATCCGCTTGCAAAAA CGC-CCAGTTTTTA-CTGTGGTCGTCT TGATT AGACGACAGCAGATTAAAAATGGCGCG GCGAAATTGCAGCTG MADE_04070 4384369 - 4384079 - | transcriptional regulator MADE_04071 4385187 - 4385303 + | hypothetical protein MADE_04072 4385337 - 4385474 + | hypothetical protein TERM 4672 4385482 - 4385458 - f 100 -5.1 -5.9667 | opp_overlap 4385458, overlap 4385475 AAAAACAGAAAAAAA TCGACACAT GGAATTG ATATGTCGA TCTAATCGACATAAA TERM 4673 4385495 - 4385475 - f 79 -11.3 -2.56571 | opp_overlap 4385458, overlap 4385458 4385488 GACACATGGAATTGA TATGTCGAT CTA ATCGACATA AACTGACCCAATAGT TERM 4674 4385899 - 4385882 - g 70 -4.8 -4.46835 | ACAACTTGAAAGAAA GCCGCT TTGCAC AGCGAC AGCCATTGAAGTATG TERM 4675 4386539 - 4386504 - g 76 -8.5 -4.16943 | gap 1 CGTGACATTGCAAAA CGCCAAACTGCTTCAA CGTAT TTAAAGCAGT-TAGCG GGTATTGGTGTGCTG MADE_04073 4385544 - 4386635 + | filamentation induced by cAMP protein Fic MADE_04074 4386807 - 4386661 - | tryptophan halogenase MADE_04075 4386941 - 4387942 + | galactose operon repressor MADE_04076 4388355 - 4388801 + | hypothetical protein TERM 4676 4388806 - 4388825 + T 82 -6.3 -4.90381 | opp_overlap 4388807, overlap 4388807 TAGATAGATAAACAA AGCCCCG AACAAA CGGGGCC TTTTATTATATTCAA TERM 4677 4388824 - 4388807 - T 93 -9.8 -4.66625 | opp_overlap 4388806 4388807 AGATAGATAAACAAA GCCCCG AACAAA CGGGGC CTTTTATTATATTCA TERM 4678 4388807 - 4388824 + T 77 -9.8 -3.53144 | opp_overlap 4388807, overlap 4388806 AGATAGATAAACAAA GCCCCG AACAAA CGGGGC CTTTTATTATATTCA MADE_04077 4389475 - 4388858 - | Outer membrane protein and related peptidoglycan-associated (lipo)protein MADE_04078 4391061 - 4389865 - | metal dependent phosphohydrolase TERM 4679 4392090 - 4392075 - g 72 -5.4 -4.4009 | GCGCACTTCAGAAAA TGTGGC AGGG ACCACA ATCCCACCGACGAAA MADE_04079 4391531 - 4392115 + | DTW domain containing protein MADE_04080 4392733 - 4392134 - | probable glutathione S-transferase MADE_04081 4393812 - 4392826 - | hypothetical protein TERM 4680 4393377 - 4393365 - G 86 -4.1 -5.48028 | GAAATAAAAATAAAA TGGCT AAG AACCA AAACGGAACAGCGGT TERM 4681 4393794 - 4393765 - G 85 -6.5 -5.15117 | opp_overlap 4393774 TAAAAGCGGAAAAAA TCCAATTGACGCA CCAT TGTGTAAATTGGA GTAGGGGTTGAGCTT TERM 4682 4393999 - 4393970 - R 95 -13.7 -3.28712 | opp_overlap 4393977, overlap 4393977 CTTTTCGTTCGACAA TAAAAAACCCGCC ATTT GGCGGGTTTTTTC AAAGCTGTGCTTTTT TERM 4683 4393977 - 4393992 + r 100 -11.8 -5.02476 | opp_overlap 4393970 4393977 TTCGACAATAAAAAA CCCGCC ATTT GGCGGG TTTTTTCAAAGCTGT TERM 4684 4393992 - 4393977 - R 100 -11.8 -5.55769 | opp_overlap 4393977, overlap 4393970 TTCGACAATAAAAAA CCCGCC ATTT GGCGGG TTTTTTCAAAGCTGT MADE_04082 4394426 - 4394013 - | membrane-bound ATP synthase, F1 sector, epsilon-subunit TERM 4685 4394108 - 4394129 + g 71 -8 -3.87576 | overlap 4394093 CAGCGCCTGGGTTGG CGATGTGC TCTTCT GCACGTCG TTTGGCTTCTTGTGC TERM 4686 4394452 - 4394492 + r 100 -12.8 -4.30933 | gap 1 TGATTAGGTACGTTA GCATGATGCT-AGGCTAGC TCAC GCTAGCCTCACCATTATGC TTTCTTGGCTTTCTC MADE_04083 4395872 - 4394487 - | ATP synthase subunit B TERM 4687 4395176 - 4395158 - G 71 -7.4 -3.85505 | CTACGAAGAATAGAA CGTCACGA CCT TCGTCACG GAACTTCTCAGCCAT MADE_04084 4396766 - 4395906 - | ATP synthase subunit C MADE_04085 4398366 - 4396825 - | ATP synthase subunit A TERM 4688 4398308 - 4398320 + g 70 -4.9 -4.46587 | overlap 4398295 GCTTCACTGCTTACA TTGAA CTG TTCAA TTCTTTTCTTGATCA MADE_04086 4398571 - 4398380 - | ATP synthase F1, delta subunit MADE_04087 4399001 - 4398618 - | membrane-bound ATP synthase, F0 sector, subunit b MADE_04088 4399355 - 4399134 - | ATP synthase F0, C subunit MADE_04089 4400289 - 4399456 - | membrane-bound ATP synthase, F0 sector, subunit a, important for F0 assembly TERM 4689 4399523 - 4399513 - G 82 -6.8 -4.73614 | CATCATGAAAATAAA CGCT TGA AGCG GAAGTACCAGAATAT TERM 4690 4399718 - 4399707 - G 78 -5.8 -4.84359 | TCACCGGGATAAAAA TCGG GTGA CCGA AAGGCTGCATAGTGA TERM 4691 4400371 - 4400384 + r 71 -6.7 -4.03887 | overlap 4400372 4400373 CGTTATTTTCGTTAT CGCAA CGCG TTGCG TTGTCTTTATTCTTT TERM 4692 4400372 - 4400389 + r 77 -6.3 -4.56978 | gap 1, overlap 4400371 4400373 GTTATTTTCGTTATC G-CAACGC GTT GCGTTGTC TTTATTCTTTCGAAC TERM 4693 4400373 - 4400387 + r 84 -10 -3.89033 | overlap 4400371 4400372 TTATTTTCGTTATCG CAACGC GTT GCGTTG TCTTTATTCTTTCGA TERM 4694 4400440 - 4400415 - R 77 -8.3 -3.93369 | gap 1, opp_overlap 4400418 4400418, overlap 4400418 CGAACCGTAATGAAA CATC-GCTAGCC CGT GGCTAGCCGTTG TAATCACAAATGCCA MADE_04090 4400798 - 4400391 - | membrane-bound ATP synthase subunit, F1-F0-type proton-ATPase MADE_04091 4401862 - 4400984 - | ParB family protein MADE_04092 4402702 - 4401908 - | transcriptional regulator of chromosome partitioning protein; ParA family protein; could be a protein tyrosine kinase MADE_04093 4403371 - 4402736 - | glucose-inhibited division protein B TERM 4695 4402976 - 4403006 + g 80 -6.9 -4.65895 | overlap 4402979 CACTTCACCGTTGTG CGCTTCCACCCG-GC TTT GCACGGGTGTAA-CG TTTTTCAATCCAAGG TERM 4696 4403536 - 4403558 + r 71 -4 -4.84673 | opp_overlap 4403539, overlap 4403537 4403539 AGTCGTCTATTGATG CAAGCGCGTG TTT TACGCGCTAA TTTTGTCTTGTTTAC TERM 4697 4403555 - 4403539 - R 72 -9.4 -3.07816 | opp_overlap 4403537 4403536 4403539 CGTCTATTGATGCAA GCGCGT GTTTT ACGCGC TAATTTTGTCTTGTT TERM 4698 4403539 - 4403555 + r 77 -10.1 -3.28651 | opp_overlap 4403539, overlap 4403537 4403536 CGTCTATTGATGCAA GCGCGTG TTT TACGCGC TAATTTTGTCTTGTT MADE_04094 4405449 - 4403548 - | glucose inhibited division protein A TERM 4699 4404843 - 4404854 + g 71 -3.6 -4.7497 | GTGCATCCAGTCTTG CTGG TGTC CCGG TTTTTAATCGGTCAA TERM 4700 4406131 - 4406104 - R 100 -11.4 -5.72254 | opp_overlap 4406104 TCAAACAATAAAAAA GGGCAGTGAA GAAACGCT TTCACTGCCC TTAAATCAATCGTTT TERM 4701 4406104 - 4406131 + r 82 -12.1 -3.09208 | opp_overlap 4406104 TCAAACAATAAAAAA GGGCAGTGAAG AAACGC TTTCACTGCCC TTAAATCAATCGTTT MADE_04095 4406997 - 4406170 - | flavodoxin MADE_04096 4407672 - 4407004 - | flavodoxin MADE_04097 4408137 - 4407700 - | flavodoxin/nitric oxide synthase MADE_04098 4409580 - 4408192 - | tRNA modification GTPase TERM 4702 4409518 - 4409538 + g 85 -12.5 -3.34222 | opp_overlap 4409510 4409508 CACAATACCTACGCC GCCACGGCC AGG GGCCGTAGC TTGTGCGGTAATGGT MADE_04099 4410065 - 4409583 - | nucleotide-binding protein TERM 4703 4410088 - 4410107 + r 100 -15 -2.97613 | opp_overlap 4410088, overlap 4410083 4410090 TCCTCTAAGACAAAA CAGCCCGC GTAG GCGGGCTG TGTAATTAATTGCTC TERM 4704 4410107 - 4410088 - R 100 -15 -4.66537 | opp_overlap 4410088 4410083 4410090 TCCTCTAAGACAAAA CAGCCCGC GTAG GCGGGCTG TGTAATTAATTGCTC TERM 4705 4410090 - 4410105 + r 82 -11.8 -3.03554 | opp_overlap 4410088, overlap 4410088 4410083 CTCTAAGACAAAACA GCCCGC GTAG GCGGGC TGTGTAATTAATTGC MADE_04100 4410440 - 4410129 - | putative inner membrane protein translocase component YidC MADE_04101 4411783 - 4410458 - | inner membrane protein, 60 kDa MADE_04102 4412194 - 4412027 - | ribonuclease P