TransTermHP v2.07 (built on Jan 21 2009) 25 bins; sample size is 20000000 --pval-conf=/fs/szasmg2/carlk/TTupdate2/expterm.dat --gc=-2.3 --au=-0.9 --gu=1.3 --mm=3.5 --gap=6 --max-len=59 --min-stem=4 --max-loop=13 --min-loop=3 --uwin-length=6 --uwin-require=3 --max-hp-score=-2 --max-tail-score=-2.5 --loop-penalty=1,2,3,4,5,6,7,8,9,10,11 --start-cut=0 --end-cut=25 Genes: 0.574118 %AT, 5658080 nt, 34582 terms. Intergenic: 0.634518 %AT, H2T: 811794 nt, 6207 terms; T2T: 236443 nt, 4239 terms; H2H: 397675 nt, 6200 terms. Each terminator entry starts in column 3 and is of the form: term # start - end +/- regionconf hp tail | notes Followed by the sequence of the 5' tail, 5' stem, loop, 3' stem, and 3' tail. Genes are interspersed, and start the first column. SEQUENCE gi|75812284|ref|NC_007410.1| Anabaena variabilis ATCC 29413 plasmid A, complete sequence (length 366354) Ava_B0001 241 - 1380 + | transposase IS4 Ava_B0002 3214 - 1478 - | ankyrin TERM 1 3471 - 3484 + r 70 -3.1 -5.00027 | GCAAATATCAACATT GCGAT AGAA ATTGC TTTTATATTTTTACT Ava_B0003 4716 - 3787 - | hypothetical protein TERM 2 4320 - 4345 + g 77 -10.5 -3.14683 | opp_overlap 4309, overlap 4333 4335 GCAATTGGCGCTCAT TGGTCGGCA TTGGTATC TGCCGACCA TTGGTCGGCAAATGT TERM 3 4333 - 4359 + g 100 -11.6 -3.98842 | opp_overlap 4309, overlap 4320 4335 ATTGGTCGGCATTGG TATCTGCCGACC ATT GGTCGGCAAATG TTTCTGAATATTCTC TERM 4 4335 - 4357 + g 93 -12 -3.57639 | opp_overlap 4309, overlap 4320 4333 TGGTCGGCATTGGTA TCTGCCGACC ATT GGTCGGCAAA TGTTTCTGAATATTC TERM 5 4721 - 4741 + H 76 -9.7 -3.09987 | GGTTGGCTCATGCTC CCACCTCCA AAC TGTAGGTGG TTAAGTGGGTATTGA TERM 6 4792 - 4817 + H 83 -8.9 -4.26019 | opp_overlap 4792, overlap 4813 GTGTTTTACAATGTA CCCCCAGCCTC ACGA GAGTCTTGGGG TTTTCCATATCCTTA Ava_B0004 4990 - 5268 + | hypothetical protein Ava_B0005 5868 - 6371 + | glyoxalase/bleomycin resistance protein/dioxygenase TERM 7 6394 - 6423 + F 73 -5.9 -4.48741 | gap 1, opp_overlap 6394 6399, overlap 6397 6420 ATGATAAATATAGGA GCAGAGTATAGATA TTT TA-CTATACTCTAC TTTTCTAGTAGCTTA TERM 8 8342 - 8317 - g 74 -6.3 -4.46073 | gap 1 TGCGAACACAATAAA CATTAAC-TCTC AAG GAGAAGTTAACG CCACCACTACGATTG Ava_B0006 6452 - 8989 + | filamentous haemagglutinin-like Ava_B0007 8989 - 11457 + | TPR repeat-containing protein Ava_B0008 12395 - 11418 - | hypothetical protein TERM 9 12205 - 12220 + g 80 -2.6 -5.46698 | CATATAAATAAAGAT TCATTT TCTA AAGTGA TTTTTTCATTTTGAC Ava_B0009 14310 - 12448 - | TPR repeat-containing serine/threonin protein kinase TERM 10 14574 - 14595 + H 79 -10.3 -3.19178 | opp_overlap 14579, overlap 14572 14563 GCTTTTTAGTACCCA CCATACTTT TCCT AAAGTATGG TCTTGCTAAATTTCT Ava_B0010 14938 - 16479 + | hypothetical protein TERM 11 17015 - 16977 - f 79 -4.7 -5.12474 | gap 1, opp_overlap 17007, overlap 16978 16981 16989 GAGAACACATAAAAA TGTAGGCAAAAC-CTACT AAGG AGTAGAGCTTTGCCTGGA ATCCGGACAATTGAA TERM 12 17011 - 16981 - f 75 -9.9 -2.91457 | gap 1, opp_overlap 17007, overlap 16978 16977 16989 ACACATAAAAATGTA GGCAAAAC-CTACT AAGG AGTAGAGCTTTGCC TGGAATCCGGACAAT TERM 13 17167 - 17184 + F 74 -2.6 -5.41746 | opp_overlap 17167 AAAAGGGGAAGGTAA GGACAG GTTTTG CTGACC TTTTTTTGGCGAATT TERM 14 17465 - 17436 - g 75 -5.7 -4.60041 | opp_overlap 17436 17459, overlap 17439 ATCTACCGTGAAAAA TAACCAATACCCA CAGT CGGGTATTGGGGA TCAATTGCTGTCAAA TERM 15 17462 - 17439 - g 100 -11.8 -4.41633 | opp_overlap 17436 17459, overlap 17436 TACCGTGAAAAATAA CCAATACCCA CAGT CGGGTATTGG GGATCAATTGCTGTC TERM 16 19315 - 19288 - g 72 -6.4 -4.258 | opp_overlap 19296, overlap 19289 19296 CGATTTATTAAGAAA CTTGAAAAGTCA CTAT TGACTTTACAAA CTGTGGTACAGTCCG Ava_B0011 17428 - 21111 + | hypothetical protein TERM 17 21175 - 21144 - f 73 -6.1 -4.36914 | opp_overlap 21143 CCTTCTGCGAGAAAA TTACTTATGAGAA TTACAT TTCTGATAAGTAA ATGTCTCGCCCAAGA Ava_B0012 21176 - 22138 + | Phage integrase TERM 18 22536 - 22551 + F 90 -4 -5.88471 | overlap 22541 TTAGCAATATTATAC TAGTAC TTTC GTGCTA TTTTTTTTAGTACTA TERM 19 22638 - 22623 - f 82 -7.6 -4.42062 | TATCCCTCAAACAAA TCGTTC AGGA GAACGA GATGCGTACAAACTA Ava_B0013 22640 - 23176 + | hypothetical protein TERM 20 23198 - 23183 - f 72 -7.6 -3.75153 | TTCGTTTAACTGAAA CCAGTA GAAA TACTGG GGGATAGTTAGCTTG Ava_B0014 23644 - 25527 + | RNA-directed DNA polymerase TERM 21 25882 - 25924 + F 75 -9.1 -3.61103 | gap 1, opp_overlap 25867 25915 GACGCTACGTGTTAA GCGT-CGGCGCAGCCTCTCC GACA GGAGAAGCTATGCCGCAGGC TTTACGCTCCAATTC Ava_B0015 25998 - 26297 + | hypothetical protein Ava_B0016 26319 - 29135 + | hypothetical protein Ava_B0017 29139 - 29858 + | hypothetical protein Ava_B0018 30009 - 31109 + | hypothetical protein Ava_B0019 31213 - 32007 + | hypothetical protein Ava_B0020 32004 - 33542 + | hypothetical protein Ava_B0021 33539 - 34279 + | hypothetical protein TERM 22 35282 - 35254 - g 76 -9.5 -3.55622 | opp_overlap 35262, overlap 35236 35257 CTTAACGGTGGTAAA GAACCTACGGGGC GAA ACCCCTTTGGTTC CAGTTTTAAACAAGT Ava_B0022 34276 - 35475 + | hypothetical protein Ava_B0023 35478 - 37244 + | transfer complex protein TrsK-like Ava_B0024 37250 - 37741 + | hypothetical protein TERM 23 39435 - 39420 - g 75 -3.4 -5.13741 | GCAATGGAATAAAAA TAAATT TGAT AATTTA CGTTGCACTCTCAAG TERM 24 39929 - 39891 - g 75 -8.2 -3.81146 | opp_overlap 39891 TTTTGTAATTAAGAA TCATGGCGGCGACAAATA CAG TATCCATCGTCGTCATGA TCATGTAGAGTTAAT TERM 25 40054 - 40040 - g 73 -2.8 -5.21683 | AGCCAAAAAAACAAA TCAACA TTC TGCCGA TTGAAAGGCAAGAGT TERM 26 40253 - 40220 - g 70 -7.5 -3.87641 | opp_overlap 40220 AAGAGGTGTTACAAA TCCTGACCCAAACTA TCAC TAGTTTTGGACAAGA TGACTTAACTTTGGG Ava_B0025 37789 - 41373 + | hypothetical protein Ava_B0026 41400 - 42191 + | hypothetical protein Ava_B0027 42435 - 42193 - | hypothetical protein Ava_B0028 43180 - 42419 - | histidine kinase TERM 27 43906 - 43944 + G 82 -6.9 -4.91109 | gap 1 TGACGACCACTTAAC CCAGCGAGAAATTAGTGT TTTA GCATTAATTGCT-GCTGG TTTTTCTAATAAACA Ava_B0029 43448 - 44110 + | two component LuxR family transcriptional regulator Ava_B0030 44716 - 44123 - | hypothetical protein Ava_B0031 45402 - 44716 - | hypothetical protein Ava_B0032 46429 - 45407 - | hypothetical protein Ava_B0033 46802 - 46476 - | hypothetical protein Ava_B0034 47275 - 47931 + | hypothetical protein Ava_B0035 48630 - 48070 - | hypothetical protein Ava_B0036 50273 - 48627 - | ATPase TERM 28 48902 - 48919 + g 71 -9.9 -2.7264 | overlap 48901 48916 CGCCAATCTCAGCAC CCACACA GCGT TGTGTGG CTTTGAGCAACCTTT Ava_B0037 50890 - 50381 - | plasmid recombinant protein Ava_B0038 52014 - 50944 - | hypothetical protein Ava_B0039 53246 - 52059 - | plasmid recombination enzyme Ava_B0040 53349 - 53654 + | hypothetical protein Ava_B0041 53743 - 54306 + | hypothetical protein Ava_B0042 54329 - 55528 + | hypothetical protein Ava_B0043 55631 - 55879 + | putative multidrug resistance protein TERM 29 55890 - 55909 + F 79 -10.8 -2.86477 | opp_overlap 55890, overlap 55883 55880 GTTAGCAACAAAAAA CTTCTGGA ATAT TCCAGAAG TAATTGGTGTGTTTT TERM 30 55909 - 55890 - f 100 -10.8 -5.5112 | opp_overlap 55890 55883 55880 GTTAGCAACAAAAAA CTTCTGGA ATAT TCCAGAAG TAATTGGTGTGTTTT TERM 31 56423 - 56411 - g 71 -4.9 -4.67234 | ACCGAACCTGAAAAA TTCTT TCA AAGAA ATAACGGAATTGTAC Ava_B0044 56225 - 57427 + | hypothetical protein Ava_B0045 57429 - 57839 + | hypothetical protein TERM 32 57856 - 57904 + F 88 -8.4 -4.57073 | overlap 57859 ATATGTTTTCCGATT TTACTAGTTACTTTCGTACT CTTTTTTTC AGTACGAAAGTAGCTAGTTC TTTTTAAAAAAAATA TERM 33 57859 - 57901 + F 100 -14.5 -4.40561 | overlap 57856 TGTTTTCCGATTTTA CTAGTTACTTTCGTACT CTTTTTTTC AGTACGAAAGTAGCTAG TTCTTTTTAAAAAAA TERM 34 57957 - 57982 + F 80 -10.5 -3.4582 | opp_overlap 57956 57955, overlap 57948 57955 GATTTTCCAGAAATT GGTGTAGTTGA TTTC TCTACTACACC TGTTTCCTCAAGTAA Ava_B0046 58024 - 58404 + | hypothetical protein TERM 35 58457 - 58426 - T 95 -11.1 -4.61199 | opp_overlap 58426 ATGGGACATACAAAA GCTGAAAGTATTT GGAAAA AAACACTTTCAGC TTGTCTAAAATATTT TERM 36 58426 - 58457 + T 75 -8.9 -3.52481 | opp_overlap 58426 ATGGGACATACAAAA GCTGAAAGTATTT GGAAAA AAACACTTTCAGC TTGTCTAAAATATTT Ava_B0047 59029 - 58481 - | hypothetical protein Ava_B0048 59065 - 60807 + | hypothetical protein Ava_B0049 60800 - 62938 + | hypothetical protein Ava_B0050 63042 - 63422 + | hypothetical protein Ava_B0051 63559 - 64947 + | hypothetical protein TERM 37 65026 - 65012 - f 74 -4.2 -5.00616 | CTTTTTTTTAAAAAA TCTTCC GGG GGATGA TAAGGAAAAACTTGT Ava_B0052 65077 - 65694 + | hypothetical protein TERM 38 66041 - 66009 - g 72 -10 -2.79273 | overlap 66008 66031 TTTCCTCAACACAAC CCAAGCCCAAGT CAATCAAAT ACTTGAGCTTGG TCAACGAGCCAAGCA TERM 39 66318 - 66304 - g 70 -3.6 -4.87291 | CACGTTAACGAAAAA CTCAAT CAA ATTAAG AAGGTACAGCGAGAA TERM 40 66672 - 66660 - g 72 -6.3 -4.26079 | overlap 66650 CCAAATTAGCGAAAA GCTAA ATC TTAGC CGAGAGCGAGTGCGC Ava_B0053 65809 - 66759 + | sigma-28 Ava_B0054 66891 - 67349 + | acetyltransferase Ava_B0055 68222 - 67500 - | hypothetical protein TERM 41 69234 - 69290 + G 100 -35 -2.52543 | gap 1, opp_overlap 69234 AAAAAATCATCAAAA CCTCCCATTCCTTTCACCGCTTATCCT GGCA AGGA-AAGCGGTGAAAGGAATGGGAGG TGAATTGAGAAACGT TERM 42 69290 - 69234 - g 100 -35 -4.46432 | gap 1, opp_overlap 69234 AAAAAATCATCAAAA CCTCCCATTCCTTTCACCGCTTATCCT GGCA AGGA-AAGCGGTGAAAGGAATGGGAGG TGAATTGAGAAACGT Ava_B0056 68304 - 69293 + | hypothetical protein Ava_B0057 70654 - 69371 - | HNH endonuclease TERM 43 69786 - 69805 + g 73 -7.2 -4.10657 | CCGCCAGAACCAGTT TCTATTGG TAAG CCAGTAGA TTTTAAAGCATATAA TERM 44 70854 - 70891 + r 74 -8 -3.9693 | gap 3, opp_overlap 70839 70854 70853, overlap 70854 TTTGGGCTTTAAAAG CCC-CCACC-A-TATTGCT CTT AGCAATAATTGGTGGTGGG TTGTTTACCTGGATG Ava_B0058 71393 - 70938 - | glutathione-dependent formaldehyde-activating, GFA TERM 45 71420 - 71475 + H 76 -9.2 -3.43109 | opp_overlap 71427 71432, overlap 71419 71421 AGCAAGTGCCTTGTT AAGTTAAGTGAACTATGGTGATCG CCTTCTTA TGATCGCCATAGTTCACTTCACAG TGTTTGAATGATATG TERM 46 71421 - 71474 + H 85 -12.7 -2.65384 | opp_overlap 71427 71432, overlap 71420 71419 GCAAGTGCCTTGTTA AGTTAAGTGAACTATGGTGATCG CCTTCTTA TGATCGCCATAGTTCACTTCACA GTGTTTGAATGATAT TERM 47 71468 - 71427 - H 84 -11.8 -3.17075 | opp_overlap 71421 71420 71419, overlap 71432 GCCTTGTTAAGTTAA GTGAACTATGGTGATC GCCTTCTTAT GATCGCCATAGTTCAC TTCACAGTGTTTGAA TERM 48 71912 - 71881 - g 70 -5.2 -4.4261 | gap 1, overlap 71866 71882 71904 CTGGCAAGATGAAAA TTCTGCCAAGCTTTG GGA CAAAGC-TGCCAGAC AGATAGAACAGATAA TERM 49 71911 - 71882 - g 71 -8.7 -3.25084 | gap 1, overlap 71866 71881 71904 TGGCAAGATGAAAAT TCTGCCAAGCTTTG GGA CAAAGC-TGCCAGA CAGATAGAACAGATA Ava_B0059 71750 - 71941 + | hypothetical protein Ava_B0060 72343 - 72870 + | hypothetical protein Ava_B0061 73464 - 73015 - | glyoxalase/bleomycin resistance protein/dioxygenase Ava_B0062 75319 - 73631 - | dihydroxy-acid dehydratase TERM 50 74103 - 74116 + g 77 -4.5 -5.00884 | overlap 74110 AACACCCTTGCAGTT CCGGT AATT ACTGG TTTTTTCACGCCAGT TERM 51 74501 - 74490 - G 74 -4.4 -5.03314 | opp_overlap 74490 GCGATCGCTAAAAAA TGCA ACAC TGCA TTGGTCGAACCACCC TERM 52 75974 - 75961 - g 70 -3.8 -4.74706 | TTCAAGAGTTAAAAA TGGC GAGATT GCCA CTGACTCCATCTTTG Ava_B0063 75633 - 76268 + | hypothetical protein TERM 53 76504 - 76491 - g 71 -6.7 -4.21737 | ATCAAAACAATCAAA CTCTG GAAT CAGAG ATGAAAATATCCCAG Ava_B0064 76258 - 76662 + | hypothetical protein Ava_B0065 77218 - 76802 - | hypothetical protein Ava_B0066 78787 - 77309 - | ATPase TERM 54 77792 - 77824 + g 95 -12.9 -3.17688 | opp_overlap 77791 77794 AGTGGTATCCAAAGC CATACGTTCACATTG GGC TAGTGTGAGCGTATG TTCATGCAGTCGTTC Ava_B0067 81504 - 78787 - | integrase catalytic subunit TERM 55 79302 - 79314 + g 70 -7.7 -3.68265 | TGACTTTTATTCCCT GTCCA GGC TGGAC TTTAGCGTTGCCTTT Ava_B0068 81925 - 82821 + | LysR family transcriptional regulator TERM 56 82829 - 82850 + T 70 -8.9 -3.00138 | overlap 82826 82831 TTAGATGAACCCCTA CATTTTGTT AAAC AACAAAATG TCCTTTGATATCAGT Ava_B0069 84750 - 82861 - | Type III restriction enzyme, res subunit Ava_B0070 85133 - 84906 - | hypothetical protein Ava_B0071 86474 - 85248 - | IS891/IS1136/IS1341 transposase Ava_B0072 86623 - 86471 - | transposase Ava_B0073 86899 - 87282 + | transposase Ava_B0076 88092 - 87913 - | hypothetical protein Ava_B0077 89756 - 88095 - | IS891/IS1136/IS1341 transposase TERM 57 88146 - 88129 - G 73 -9.9 -2.97109 | opp_overlap 88119 88128, overlap 88128 TGAACGCAATCAAAG CTTGCTG AGTT CAGCAAG GTGGTATCCCACAAC TERM 58 88185 - 88161 - G 81 -10.7 -3.32844 | opp_overlap 88162, overlap 88162 GGTGGTATCCCACAA CGCCTTGAGGA AAT TCCCCAAGGCT CCATTCCAATCTCGC TERM 59 88162 - 88184 + g 81 -12 -2.54523 | opp_overlap 88161 88162 GTGGTATCCCACAAC GCCTTGAGGA AAT TCCCCAAGGC TCCATTCCAATCTCG TERM 60 88184 - 88162 - G 95 -14.2 -2.59564 | opp_overlap 88162, overlap 88161 GTGGTATCCCACAAC GCCTTGAGGA AAT TCCCCAAGGC TCCATTCCAATCTCG Ava_B0078 90632 - 90177 - | hypothetical protein Ava_B0079 90886 - 90632 - | hypothetical protein Ava_B0080 91098 - 90883 - | hypothetical protein TERM 61 91163 - 91130 - R 82 -11.3 -3.33171 | gap 1 CTTAATAAGTAGGAA TAGGAGCCATAAA-CA CTC TGATTTATGACTCCTA TAAATGTCCCTAAGC Ava_B0081 91625 - 91173 - | hypothetical protein Ava_B0082 91988 - 91821 - | hypothetical protein TERM 62 92055 - 92086 + r 75 -9.6 -3.20808 | gap 1, opp_overlap 92055, overlap 92054 CATGAATACTAGCAA TTGCCCGAATT-TTC AGT GATTAATTCGGGCAA GTTTCTTCTAATCAG TERM 63 92086 - 92055 - R 75 -9.6 -3.28637 | gap 1, opp_overlap 92055 92054 CATGAATACTAGCAA TTGCCCGAATT-TTC AGT GATTAATTCGGGCAA GTTTCTTCTAATCAG Ava_B0083 92291 - 92094 - | hypothetical protein Ava_B0084 92826 - 92503 - | hypothetical protein TERM 64 92928 - 92953 + r 100 -16.3 -2.52676 | opp_overlap 92928 TTCAGCTTCATTTAA GTTAGTGGGCA ATAC TGCCCACTAAC TCCCTTAAGCCGCTA TERM 65 92953 - 92928 - R 100 -16.3 -3.06183 | opp_overlap 92928 TTCAGCTTCATTTAA GTTAGTGGGCA ATAC TGCCCACTAAC TCCCTTAAGCCGCTA Ava_B0085 93953 - 92958 - | hypothetical protein TERM 66 93873 - 93907 + g 70 -5.6 -4.32046 | CTCCGAATAGGATAA GGCGATCGCAAACTTT CTC AGGGTGGGCGGTCGTC TTTGGTTTTTACGGG TERM 67 93945 - 93927 - G 73 -8.9 -3.57144 | GTTTTTACGGGCAAA GTTGTGG GGGAG CCACAAC GCACTCATGGAAATT Ava_B0086 94318 - 94653 + | hypothetical protein TERM 68 94983 - 94965 - g 89 -11.8 -3.27498 | CAGATGCGAGATCAA CAGCTTCA TCG TGAAGCTG GCTATAAAAGTTTTG TERM 69 95326 - 95268 - g 100 -12.1 -5.08824 | gap 2, opp_overlap 95283, overlap 95272 CTGCCACGTAAAAAA GCATCATCTCAGGAACCAATGGTTCCTAA AAT TCAAGAACCAATGGTTCCTGA-ATC-TGC AAGAGTCACCGTTAC TERM 70 95325 - 95272 - g 88 -12.7 -2.63182 | gap 1, opp_overlap 95283, overlap 95268 CACGTAAAAAAGCAT CA-TCTCAGGAACCAATGGTTCCTAA AAT TCAAGAACCAATGGTTCCTGAATCTG CAAGAGTCACCGTTA Ava_B0087 94830 - 96476 + | hypothetical protein TERM 71 96755 - 96782 + G 76 -9.2 -3.54012 | opp_overlap 96763, overlap 96756 ATTAAATCACCTGAG TTCAATCACCGG GATT CCGGTAATTGAG TTATATCAATCGTTT TERM 72 96756 - 96781 + G 74 -10.5 -2.71684 | opp_overlap 96763, overlap 96755 TTAAATCACCTGAGT TCAATCACCGG GATT CCGGTAATTGA GTTATATCAATCGTT Ava_B0088 96510 - 97340 + | KilA-like TERM 73 97749 - 97707 - g 100 -15 -4.09685 | opp_overlap 97715, overlap 97710 TCGGATTTGTCAAAA TCAGCAGATCGATGTGTCCA AAT TGCTCACATCGATCTGCTCA CAGCCGGCAGATCAT TERM 74 97746 - 97710 - g 100 -16.7 -3.08508 | opp_overlap 97715, overlap 97707 GATTTGTCAAAATCA GCAGATCGATGTGTCCA AAT TGCTCACATCGATCTGC TCACAGCCGGCAGAT Ava_B0089 97357 - 98460 + | hypothetical protein TERM 75 99976 - 99966 - g 73 -2.6 -5.16841 | TTATATTAACAAAAA TTTT TCC AAAA TCAGGTAATATAAAT Ava_B0090 98804 - 100924 + | hypothetical protein Ava_B0091 101878 - 100961 - | restriction endonuclease Ava_B0092 102274 - 102633 + | hypothetical protein Ava_B0093 103413 - 104357 + | hypothetical protein Ava_B0094 105056 - 104475 - | hypothetical protein TERM 76 105049 - 105062 + g 78 -2.3 -5.49809 | AATTTTCTGACTGCT GTGGT CATA ACCCC TTTTTTTACACTTTC Ava_B0095 106271 - 105243 - | WD-40 repeat-containing protein Ava_B0096 106845 - 106348 - | hypothetical protein Ava_B0097 107026 - 107334 + | HNH endonuclease TERM 77 107892 - 107866 - g 78 -9.5 -3.58505 | opp_overlap 107866, overlap 107864 TGAGGAAGAAGAAGA TTTGCTGGAAC CACCT GTTCCGGCAAA TTTAAAAAAACTACC TERM 78 107866 - 107892 + G 89 -11.7 -3.53811 | opp_overlap 107866 107864 TGAGGAAGAAGAAGA TTTGCTGGAAC CACCT GTTCCGGCAAA TTTAAAAAAACTACC Ava_B0098 107381 - 108499 + | hypothetical protein Ava_B0099 108889 - 108566 - | hypothetical protein TERM 79 108990 - 109025 + r 89 -10.7 -4.15703 | opp_overlap 108987 ATTTGGAATTGACAC TCTCACCGCTA-ATTGC TAAA GCAATGTAGCGG-GAGA TTCTTGTTTCTCAGA Ava_B0100 110210 - 109005 - | IS891/IS1136/IS1341 transposase TERM 80 110132 - 110166 + g 86 -12.2 -2.98607 | opp_overlap 110132 110131 110130, overlap 110128 110137 AATTCCAAACAAAGC GGGAACATCCAAAGCT TTT AGCTAAGGATGTTTCC TGGTCTTTGTTTGGA TERM 81 110166 - 110132 - G 70 -10 -2.55487 | opp_overlap 110128 110132 110137, overlap 110131 110130 AATTCCAAACAAAGC GGGAACATCCAAAGCT TTT AGCTAAGGATGTTTCC TGGTCTTTGTTTGGA TERM 82 110137 - 110161 + g 70 -7.1 -3.87438 | opp_overlap 110132 110131 110130, overlap 110132 110128 CAAACAAAGCGGGAA CATCCAAAGCT TTT AGCTAAGGATG TTTCCTGGTCTTTGT Ava_B0101 110257 - 110679 + | transposase IS200 Ava_B0102 111987 - 110785 - | hypothetical protein Ava_B0103 112700 - 112074 - | hypothetical protein TERM 83 112403 - 112426 + g 75 -9 -3.70902 | opp_overlap 112405 CGTTTTCATCTACAG CAGAAATTTC CGTG GAAGTTTCTG TTTCAATCTCGAAAC Ava_B0104 113310 - 115007 + | Sulfate transporter/antisigma-factor antagonist STAS Ava_B0105 115897 - 115079 - | hypothetical protein Ava_B0106 118734 - 115894 - | ATPase, E1-E2 type TERM 84 117922 - 117945 + g 93 -8.8 -4.57837 | opp_overlap 117922 CGATCCTGTAACCAA CGTATTGCCC AGTT GGGCCATGCG TTTTTGCAAAGGTGT TERM 85 119962 - 119974 + G 71 -4.8 -4.67635 | AAAGCCGGGTATCGA GTGG CATTA CCAC TTTTATCGTTTTGGC Ava_B0107 118894 - 120009 + | hypothetical protein TERM 86 120006 - 120019 + T 88 -3.1 -5.86061 | CAAACAACGCATTTT GTAGC TTTA GTTAC TTTTTTTTACTCACA TERM 87 120128 - 120180 + T 76 -9.2 -3.37796 | gap 2 AATTACTCACTCGTC GCT-CACCCCGTCGTCT-GTTACTGC TTT GCAGCAACTAGACTCAGGGGTGAAGC TTCTCGCTCGTCCCC TERM 88 120189 - 120245 + T 100 -34.8 -3.05715 | gap 1, overlap 120191 120204 GTGAAGCTTCTCGCT CGTCCCCATTCCTCTCGCCGCCACAGC GTTA GCT-TGGCGGCGAGAGGAATGGGGGTG TTGGATGAAAAAGTT TERM 89 120191 - 120243 + T 100 -33.8 -3.08679 | gap 1, overlap 120189 120204 GAAGCTTCTCGCTCG TCCCCATTCCTCTCGCCGCCACAGC GTTA GCT-TGGCGGCGAGAGGAATGGGGG TGTTGGATGAAAAAG TERM 90 120338 - 120312 - T 100 -11.7 -5.42265 | opp_overlap 120310 TTAAATTAGAAAAAA TAAGCCACTCT CTAAT AGAGTGGCTCA AATTACTAACCCAAA Ava_B0108 124666 - 120344 - | hypothetical protein TERM 91 120461 - 120409 - G 74 -9.4 -3.24329 | overlap 120407 CAGTGGGAATGAATA TCCGCTTGC-GCCACTGGATGATTTC CGT GAAA-CATCCAACAGCCACAAGCCGA TCAGCCAGGGAAAGA TERM 92 121183 - 121197 + g 72 -7.8 -3.87149 | opp_overlap 121182 121183 CAGCTTCAAAGATAC CTGCGG CGA TCGCAG TTTCGATTTGCTGAC TERM 93 121898 - 121873 - G 79 -11.2 -3.21416 | opp_overlap 121884 TACTGCGACCAGTAA CTTCAGCCAC TTGCTT GTGGCCGAAG TGCCATAGCAGTTGT TERM 94 124640 - 124650 + g 100 -8.2 -5.03994 | overlap 124636 TACATCACTTTGCTT CGGC GTA GCCG TTTTTCTCTGTGACA TERM 95 124709 - 124675 - R 100 -14.4 -4.45083 | GTGACATCCACAAAA GCGATCGCACCG TGAAGCGTAGT CGGTGCGATCGC TGGGGACTAAGCAGT Ava_B0109 125159 - 124716 - | hypothetical protein TERM 96 125252 - 125262 + H 86 -8.2 -4.39889 | overlap 125243 TCTCACGCTTTGCTT CGGC GTA GCCG TTTTCATCTAGTTGT Ava_B0110 125474 - 125725 + | hypothetical protein TERM 97 125784 - 125756 - f 82 -6.7 -4.90525 | overlap 125751 125757 TAACCCTAAACAAAA TGCTTCTGGTGAA TTA CTTACCAGAAGCC GAAGAGTGTGATTGA TERM 98 125783 - 125757 - f 80 -10.2 -3.5323 | overlap 125751 125756 AACCCTAAACAAAAT GCTTCTGGTGAA TTA CTTACCAGAAGC CGAAGAGTGTGATTG TERM 99 126906 - 126896 - g 73 -5.4 -4.68479 | ATAAAACAAGCAAAA GTTG GGA CAAC TCAAAAACAGGCGAT Ava_B0111 126026 - 126970 + | sigma-70 TERM 100 128590 - 128601 + G 75 -5.8 -4.74103 | CACAATTAGCCACAG TGCG CGAT CGCA TTTTTGAATTAGCGC Ava_B0112 127149 - 129368 + | fused recombination factor protein RarA/unknown domain-containing protein TERM 101 129400 - 129370 - T 70 -5.5 -4.46652 | TAAATAAAAAGTAAA CACTGCTAGTTAA TTTAC CCAACTAACAGCG AATTAAGAAATAGTA Ava_B0113 130554 - 129424 - | ParB family protein TERM 102 130468 - 130481 + g 93 -2.4 -6.38492 | TTGTTCTATTTCTGC TTGC AGTTGA GCAA TTTTTTTTTCTTGGT Ava_B0114 131352 - 130564 - | cobyrinic acid a,c-diamide synthase Ava_B0115 131691 - 132683 + | hypothetical protein Ava_B0116 132708 - 132989 + | hypothetical protein TERM 103 133043 - 133064 + F 73 -5.9 -4.52857 | TTTATATTCTTTGAA GGCTTTTAA ATAA TTAAATGCC TTTTCTCTAAAAACT TERM 104 133167 - 133151 - f 70 -6.5 -4.14764 | GCTTAAATAATTAAA TGCCGCT TTA AGCGGAA GTTGCACGTTTGTGA Ava_B0117 133198 - 135042 + | integrase catalytic subunit Ava_B0118 135048 - 135956 + | hypothetical protein Ava_B0119 136617 - 136075 - | hypothetical protein TERM 105 136311 - 136322 + g 71 -2.2 -5.2189 | TTTGAGTATTCATTT GTCG TTTT TGAC TTTTTTGCTGATTAC Ava_B0120 137734 - 137033 - | hypothetical protein Ava_B0121 138083 - 137817 - | hypothetical protein Ava_B0122 139317 - 138109 - | transposase TERM 106 139260 - 139275 + g 73 -2.6 -5.14563 | ATTCAATCCAATGTT CAAATG TAGC TATTTG TTTTTTGGTCAGACG Ava_B0123 139745 - 139353 - | hypothetical protein TERM 107 139884 - 139874 - g 70 -5.4 -4.50241 | opp_overlap 139874, overlap 139864 139868 AAATATGAACCAAAA CTTG CCT CAAG ATTTAGACAGAGAAA TERM 108 140149 - 140133 - g 70 -3.6 -4.89063 | CCACCGAAAAAGAAA CCAGGT GGGCA ACCAGG ACATCAAGGTAAAAC TERM 109 140284 - 140271 - g 71 -2.3 -5.09245 | overlap 140273 GTAAAAGTAGAAAAA CACGC GGTA GCGCA ACTAGTAGAATGTCC Ava_B0124 139863 - 141335 + | transposase IS66 Ava_B0125 142407 - 141652 - | hypothetical protein Ava_B0126 143048 - 142470 - | hypothetical protein TERM 110 143078 - 143136 + r 100 -17.6 -4.2803 | opp_overlap 143075 143078 143079 143082, overlap 143079 AATGATTAAGTAGAA GTCAGGAGTCAGGATTCAGGAGCCAGAA TTA TTCTGATTTCTGACTCCTGGCTCCTGGG TTTTGAGTTACGCTG TERM 111 143136 - 143078 - R 84 -11 -3.55145 | opp_overlap 143078 143079, overlap 143075 143079 143082 AATGATTAAGTAGAA GTCAGGAGTCAGGATTCAGGAGCCAGAA TTA TTCTGATTTCTGACTCCTGGCTCCTGGG TTTTGAGTTACGCTG TERM 112 143079 - 143135 + r 100 -21.1 -3.16336 | opp_overlap 143075 143078 143079 143082, overlap 143078 ATGATTAAGTAGAAG TCAGGAGTCAGGATTCAGGAGCCAGAA TTA TTCTGATTTCTGACTCCTGGCTCCTGG GTTTTGAGTTACGCT TERM 113 143135 - 143079 - R 95 -14.5 -2.72364 | opp_overlap 143079 143078, overlap 143075 143078 143082 ATGATTAAGTAGAAG TCAGGAGTCAGGATTCAGGAGCCAGAA TTA TTCTGATTTCTGACTCCTGGCTCCTGG GTTTTGAGTTACGCT TERM 114 143132 - 143082 - R 95 -14.8 -2.63614 | opp_overlap 143079 143078, overlap 143075 143079 143078 ATTAAGTAGAAGTCA GGAGTCAGGATTCAGGAGCCAGAA TTA TTCTGATTTCTGACTCCTGGCTCC TGGGTTTTGAGTTAC Ava_B0127 143809 - 143144 - | hypothetical protein TERM 115 143837 - 143870 + r 70 -3.1 -5.00267 | gap 1, overlap 143833 TATCAAAGGGTAAAA GGCGATCGCAATGTTT CTC AGGCAG-GCGGTCGTC TTTGTTTTTGTACTT Ava_B0128 144231 - 143890 - | hypothetical protein Ava_B0129 144480 - 146060 + | hypothetical protein TERM 116 146716 - 146765 + G 100 -16.2 -3.61398 | opp_overlap 146723 146734, overlap 146717 GTTTCTAACAACCCG TTAACTACC-TACCAACAACCAAC TAAT GTTGGT-GTTGGTATGGTAGTTAG TTCTTCCACGCCAAA TERM 117 146717 - 146764 + G 100 -17.5 -2.76696 | opp_overlap 146723 146734, overlap 146716 TTTCTAACAACCCGT TAACTACC-TACCAACAACCAAC TAAT GTTGGT-GTTGGTATGGTAGTTA GTTCTTCCACGCCAA TERM 118 146757 - 146723 - g 76 -10.9 -2.72558 | gap 1, opp_overlap 146717 146716, overlap 146734 ACAACCCGTTAACTA CCTACCAACAACCAAC TAAT GTTGGT-GTTGGTATG GTAGTTAGTTCTTCC TERM 119 146835 - 146804 - g 70 -9.4 -2.79183 | gap 1 TGCACGGTGAGGAGA CGGCTGACGCGCC TTTGGGG GGCGCGTC-GCCT CAGACCGTGGAAAGC TERM 120 146885 - 146871 - g 71 -8.6 -3.4959 | AGAACAAAAGCAAGA GTTACC TAC GGTAAC GGACTGCACGACGCT Ava_B0130 146149 - 147390 + | hypothetical protein Ava_B0131 148632 - 147535 - | hypothetical protein Ava_B0132 151089 - 149041 - | WD-40 repeat-containing serine/threonin protein kinase TERM 121 150118 - 150101 - G 72 -9.9 -2.76046 | opp_overlap 150092, overlap 150098 150090 150086 TCAATGCCAAGATTA TTGGTGC GTTC GCACCAA TAGCATTGACCATAG Ava_B0133 151884 - 151096 - | hypothetical protein Ava_B0134 152558 - 151902 - | von Willebrand factor, type A Ava_B0135 152967 - 153299 + | hypothetical protein Ava_B0136 153290 - 153718 + | hypothetical protein Ava_B0137 154055 - 154843 + | hypothetical protein Ava_B0138 155796 - 154912 - | hypothetical protein TERM 122 155715 - 155729 + g 70 -2.9 -5.01845 | opp_overlap 155706 CAATACTTGTTGGAA CAAAA TGCTC TTTTG TTTTTCCTTCTTCTG TERM 123 156116 - 156129 + r 76 -3.1 -5.40464 | CACAGAGAACAGAGG CGTAA CTTC TTGCG TTTTTCTTTATGCTC Ava_B0139 157183 - 156509 - | hypothetical protein Ava_B0140 157591 - 157241 - | hypothetical protein Ava_B0141 158214 - 157750 - | hypothetical protein Ava_B0142 159249 - 158218 - | Phage integrase TERM 124 158265 - 158252 - G 70 -8.1 -3.61517 | opp_overlap 158252 ATTGCTCTGTAATAA GCAGC GATC GCTGC TTCTTGTTCACTCCG TERM 125 158252 - 158265 + g 74 -8.1 -3.97307 | opp_overlap 158252 ATTGCTCTGTAATAA GCAGC GATC GCTGC TTCTTGTTCACTCCG Ava_B0143 159351 - 159659 + | hypothetical protein Ava_B0144 159646 - 159837 + | hypothetical protein Ava_B0145 161009 - 159858 - | di-haem cytochrome c peroxidase Ava_B0146 161990 - 161088 - | hypothetical protein Ava_B0147 162308 - 163228 + | TPR repeat-containing protein Ava_B0148 163395 - 165983 + | TonB-dependent siderophore receptor TERM 126 166199 - 166188 - g 71 -4.4 -4.83593 | AACAACCACCAAAAA GAGT AGTT ACTC TCAACCAACCTGCAA Ava_B0149 165995 - 167011 + | periplasmic binding protein TERM 127 167083 - 167113 + F 93 -12 -4.15029 | opp_overlap 167087 AAATCCTGTTGTTCA GATACCCGACTTCT CAA ATAAGTTGGGTATC TTGTTTCTCTCCCAT TERM 128 168491 - 168502 + G 73 -5.8 -4.56597 | overlap 168488 168486 168485 GAATCTTTGAGGCTT CCGA GAAG TCGG TTTTTAGGAGAGCCA Ava_B0150 167243 - 169774 + | TonB-dependent siderophore receptor Ava_B0151 169808 - 170818 + | periplasmic binding protein Ava_B0152 170916 - 171971 + | transport system permease protein Ava_B0153 171968 - 172750 + | ABC transporter-like Ava_B0154 173086 - 172757 - | hypothetical protein Ava_B0155 173411 - 173695 + | hypothetical protein Ava_B0156 173758 - 173997 + | hypothetical protein TERM 129 174036 - 174064 + T 95 -10.4 -4.50358 | opp_overlap 174033 TGAATAAATTCACTT GAAGTCTTGGCT ATAGC AACCAAGACTTC TTTTAGTATTTGGGT Ava_B0157 175217 - 174129 - | hypothetical protein Ava_B0158 175912 - 176322 + | hypothetical protein TERM 130 176345 - 176378 + F 78 -11.1 -2.72043 | opp_overlap 176345, overlap 176344 CCAGTAGTACATCAA GTTCGTAGTAAAGCC TTTA GTCCTTACTACGAAC CTTTGAAACAAGCTT TERM 131 176378 - 176345 - f 95 -13.3 -3.30443 | opp_overlap 176344 176345 CCAGTAGTACATCAA GTTCGTAGTAAAGCC TTTA GTCCTTACTACGAAC CTTTGAAACAAGCTT Ava_B0159 176534 - 178663 + | TonB-dependent receptor TERM 132 179432 - 179447 + G 82 -3.3 -5.46657 | TGTTTAGAAGTTTGT CAACT CGGCCC AGTTG TTTTTTATTCCAATG Ava_B0160 178703 - 179575 + | hypothetical protein TERM 133 179652 - 179671 + F 73 -9.2 -2.91582 | AACGGAGGAAACCTC CGCTCCGA CTTT TCGGTGCG TCTCTGCGTGAGATA Ava_B0161 179690 - 180892 + | periplasmic binding protein TERM 134 181163 - 181178 + G 82 -7.6 -4.42806 | CTTTGGGTGTGAGTG GTTTGC AAAT GCAAAC TTTGTTTAAAAATCC Ava_B0162 180892 - 181971 + | transport system permease protein Ava_B0163 182023 - 183024 + | ABC transporter-like TERM 135 183177 - 183135 - f 78 -10.7 -2.98823 | gap 1, opp_overlap 183113 183135 183167, overlap 183155 CGTGTCGTAGACAGA CGCTACGCGTACTCT-CAAG AGAA CTCGCAGAGTACCCGTAGGG TATTGTGAAATGGTA Ava_B0164 183477 - 183698 + | hypothetical protein Ava_B0165 184406 - 185653 + | aminotransferase Ava_B0166 185910 - 186953 + | deoxyhypusine synthase-like protein TERM 136 187573 - 187562 - g 82 -2.2 -5.59534 | overlap 187564 187566 AATTAGAAGAAAAAA CACC CAAA AGTG GCTCTTTTGTGAACA Ava_B0167 187459 - 187830 + | hypothetical protein Ava_B0168 188029 - 188361 + | hypothetical protein Ava_B0169 188358 - 190694 + | ferrous iron transport protein B Ava_B0170 190723 - 190950 + | hypothetical protein Ava_B0171 191981 - 191070 - | hydrogenase accessory protein HypB TERM 137 192074 - 192042 - H 88 -4.9 -5.75342 | overlap 192044 TCTCCTGAAAAAAAA GTTTGTTAAATGCAA ACA TAGCATTTAGCAAGC TAGTGAGGCACAGAG TERM 138 193065 - 193076 + G 71 -4.4 -4.88736 | CTTTCAAACTGGCTC TAGC TCTA GCTA TTTTTGTCACTCCTC Ava_B0172 192392 - 193822 + | cytochrome bd ubiquinol oxidase, subunit I TERM 139 194085 - 194109 + G 75 -5.8 -4.64861 | CAATGCCCTGTATAT TCCAATTAGC TGCAT GGTAATTGGA TTTATTTTGCGGGCG Ava_B0173 193822 - 194835 + | cytochrome bd ubiquinol oxidase, subunit II TERM 140 194909 - 194859 - T 78 -6.2 -4.84359 | opp_overlap 194866 194869 194871, overlap 194865 194866 194869 194876 TCAGTCTGAGAAAAA GTATAATTTAGCCATAATGCACCA ATT CGGTGCATTATGTCTTATTTTAAC TAACTTTGTAATCAC TERM 141 194903 - 194865 - T 74 -8.2 -3.78785 | opp_overlap 194866 194869 194871, overlap 194859 194866 194869 194876 TGAGAAAAAGTATAA TTTAGCCATAATGCACCA ATT CGGTGCATTATGTCTTAT TTTAACTAACTTTGT TERM 142 194902 - 194866 - T 82 -11.7 -2.86187 | opp_overlap 194866 194869 194871, overlap 194865 194859 194869 194876 GAGAAAAAGTATAAT TTAGCCATAATGCACCA ATT CGGTGCATTATGTCTTA TTTTAACTAACTTTG TERM 143 194866 - 194902 + T 90 -11 -4.22346 | opp_overlap 194866 194865 194859 194869 194876, overlap 194869 194871 GAGAAAAAGTATAAT TTAGCCATAATGCACC AATTC GGTGCATTATGTCTTA TTTTAACTAACTTTG TERM 144 194899 - 194869 - T 88 -13.4 -2.66478 | opp_overlap 194866 194869 194871, overlap 194866 194865 194859 194876 AAAAAGTATAATTTA GCCATAATGCACCA ATT CGGTGCATTATGTC TTATTTTAACTAACT TERM 145 194869 - 194899 + T 95 -12.7 -4.22214 | opp_overlap 194869 194866 194865 194859 194876, overlap 194866 194871 AAAAAGTATAATTTA GCCATAATGCACC AATTC GGTGCATTATGTC TTATTTTAACTAACT TERM 146 194871 - 194897 + T 100 -13.9 -3.70622 | opp_overlap 194869 194866 194865 194859 194876, overlap 194869 194866 AAAGTATAATTTAGC CATAATGCACC AATTC GGTGCATTATG TCTTATTTTAACTAA TERM 147 194892 - 194876 - T 73 -8.7 -3.38118 | opp_overlap 194871 194869 194866, overlap 194869 194866 194865 194859 ATAATTTAGCCATAA TGCACCA ATT CGGTGCA TTATGTCTTATTTTA TERM 148 195146 - 195113 - T 77 -8.3 -3.87373 | opp_overlap 195115, overlap 195118 CATACCTGCTATAAA GTTAAGGGATACAAA TTTC TTTGTATCCCTTATT TATTAATATTTGCGA TERM 149 195115 - 195144 + T 100 -15.3 -4.36433 | opp_overlap 195113 195118 TACCTGCTATAAAGT TAAGGGATACAAA TTTC TTTGTATCCCTTA TTTATTAATATTTGC TERM 150 195141 - 195118 - T 93 -12.6 -3.32997 | opp_overlap 195115, overlap 195113 CTGCTATAAAGTTAA GGGATACAAA TTTC TTTGTATCCC TTATTTATTAATATT Ava_B0174 196264 - 195251 - | cytochrome bd ubiquinol oxidase, subunit II Ava_B0175 197715 - 196273 - | cytochrome bd ubiquinol oxidase, subunit I TERM 151 196712 - 196702 - G 71 -2.4 -5.10461 | GCCAGCCAAGAAAAA GCCG ATA CCGC TCATGATGCGGAAGG Ava_B0176 199440 - 197890 - | glucose-methanol-choline oxidoreductase Ava_B0177 200164 - 199544 - | cytochrome c oxidase subunit III TERM 152 200254 - 200235 - R 74 -5 -4.86731 | opp_overlap 200239, overlap 200236 200239 CTCCTGGAAACAAAA TTAAGGAC TGGA GTCCTTAC TACGAACATCGCACT TERM 153 200253 - 200236 - R 72 -8.5 -3.51557 | opp_overlap 200239, overlap 200235 200239 TCCTGGAAACAAAAT TAAGGAC TGGA GTCCTTA CTACGAACATCGCAC Ava_B0178 201965 - 200286 - | cytochrome c oxidase, subunit I TERM 154 200412 - 200392 - G 100 -11.9 -4.09739 | GGAATCTCCTCAAAA TTCTCCACC GGC GGCGGAGAA GCCACCAGCCACTCC Ava_B0179 202894 - 201998 - | cytochrome c oxidase, subunit II Ava_B0180 203496 - 202891 - | hypothetical protein TERM 155 203032 - 203020 - G 71 -4.1 -4.81734 | AAACATGATGAAAAA TCCAG CCG CTAGA TAACTCCACTGCACT Ava_B0181 203993 - 203493 - | hypothetical protein TERM 156 204137 - 204147 + H 70 -5.4 -4.38637 | opp_overlap 204137 GTCAGAGATTAAAAT GACA AAC TGTC TTTTGACTTATTATT Ava_B0182 204682 - 205101 + | CopY family transcriptional regulator Ava_B0183 205101 - 205946 + | hypothetical protein Ava_B0184 207186 - 205996 - | major facilitator transporter TERM 157 207240 - 207211 - R 73 -6.4 -4.29656 | overlap 207212 TAGAAAAGGGCAAAA TGGCGACAGAAA TAATGT TTACTGTCGCCT CCAAAATCAAGATTA TERM 158 207239 - 207212 - R 77 -9.9 -3.16709 | overlap 207211 AGAAAAGGGCAAAAT GGCGACAGAAA TAATGT TTACTGTCGCC TCCAAAATCAAGATT Ava_B0185 209808 - 207253 - | TonB-dependent receptor TERM 159 207499 - 207482 - G 71 -9.1 -3.33969 | TAAGTTATTCCATAA CCGCGCA ATTC TGCACGG GCAAAAATACCACCG TERM 160 209062 - 209047 - G 71 -4.8 -4.58395 | TTGATTGGCTAAAAA GTTAAA GTTA TTTAAC CCCCGCACACTGTAG TERM 161 209715 - 209753 + g 71 -9.1 -3.28119 | gap 1, opp_overlap 209743 TTATCGGCTTCTCTT GTGC-ATTTGCTTTCTGA GTTA TCAGCAAGCAAATCGTAC TTGCTATACCTAGAT TERM 162 210253 - 210268 + r 72 -7.6 -3.77906 | opp_overlap 210253 AGCCCTATGCAATTA GGCTAA TACT TTAGCC TTGTATATTTCAGTT TERM 163 210548 - 210527 - R 78 -5.9 -4.86731 | GGTTTTTAAAGAAAA GGCATTTAA TTAT TTAAAAGCC TTCAAAGAATATAAG TERM 164 210724 - 210742 + r 72 -3.8 -4.98255 | overlap 210721 AGACATCCCTAACTT TTGCGCTC GCT GACTGCAA TTTTTGTAGTTGCGA Ava_B0186 210904 - 210704 - | hypothetical protein Ava_B0187 211723 - 211049 - | hypothetical protein Ava_B0188 212187 - 211720 - | hypothetical protein Ava_B0189 213222 - 212191 - | Phage integrase TERM 165 212238 - 212225 - G 70 -8.1 -3.61517 | opp_overlap 212225 ATTGCTCTGTAATAA GCAGC GATC GCTGC TTCTTGTTCACTCCG TERM 166 212225 - 212238 + g 74 -8.1 -3.97307 | opp_overlap 212225 ATTGCTCTGTAATAA GCAGC GATC GCTGC TTCTTGTTCACTCCG TERM 167 213058 - 213082 + g 72 -7.8 -3.87373 | overlap 213079 GTTAGGTGCAAGGTT GGTGCTGCGG AGAAA CTCCAGCACC TTTATCCAGCGTATG TERM 168 213079 - 213113 + g 71 -2.1 -5.08601 | overlap 213058 213082 GCGGAGAAACTCCAG CACCTTTATCCAGCG TATGT CTGTGGGTAAAGATG TTTTTCTTCCCCTGC TERM 169 213403 - 213373 - R 93 -12.1 -3.90112 | gap 1, opp_overlap 213373 GTTTGGGTAAGTAAA CTGTCCGTATTAAG CCGC CTTAAT-CGGACAG TTTTATCACTTTGAT TERM 170 213373 - 213403 + r 100 -12.1 -4.51799 | gap 1, opp_overlap 213373 GTTTGGGTAAGTAAA CTGTCCGTATTAAG CCGC CTTAAT-CGGACAG TTTTATCACTTTGAT Ava_B0190 214558 - 213437 - | osmosensitive K+ channel histidine kinase sensor subunit Ava_B0191 216410 - 214851 - | response regulator receiver hybrid histidine kinase TERM 171 216372 - 216359 - G 72 -8.1 -3.76224 | opp_overlap 216359 216357 TCTTCAGGGAGCAAA TCGCC AAAA GGCGA TCGTTTATATTGTCA TERM 172 216521 - 216549 + r 83 -9.1 -4.25283 | opp_overlap 216526 216529, overlap 216525 GATTCCTATATAAGT TAAATTTAGGTAT TAA ATACCTGAGTTTA TTTTAATAGCCCAGT TERM 173 216525 - 216545 + r 75 -5.5 -4.72007 | opp_overlap 216526 216529, overlap 216521 CCTATATAAGTTAAA TTTAGGTAT TAA ATACCTGAG TTTATTTTAATAGCC Ava_B0192 217092 - 216547 - | pentapeptide repeat-containing protein Ava_B0193 217526 - 217152 - | hypothetical protein Ava_B0194 218087 - 217542 - | hypothetical protein Ava_B0195 218422 - 218093 - | hypothetical protein TERM 174 218545 - 218518 - H 72 -8 -3.74781 | opp_overlap 218520 218525 218532, overlap 218513 218525 218532 AAATTAAACGCTAAA TAAAAAATAAAC ATCT GTTTATTTTCTA TCTAAACAGTCTATA TERM 175 218538 - 218525 - H 85 -3.9 -5.64421 | opp_overlap 218525 218520 218532, overlap 218518 218513 218532 ACGCTAAATAAAAAA TAAAC ATCT GTTTA TTTTCTATCTAAACA TERM 176 218789 - 218768 - H 93 -7.5 -5.24531 | AGGTTTTAGAAAAAA CTAATTTTT ATTT AAAAATTAG AAGTAGGCAGACCAA Ava_B0196 218970 - 219293 + | hypothetical protein Ava_B0197 220556 - 219366 - | osmosensitive K+ channel histidine kinase sensor subunit Ava_B0198 220969 - 220700 - | hypothetical protein TERM 177 221539 - 221560 + r 80 -5.9 -5.03314 | opp_overlap 221539, overlap 221526 221521 GATTCTCCTTGAAAA GAGGGAA TTTGATTC TTCCCTC TTTTTTAAGAATGAC Ava_B0199 223136 - 221676 - | hypothetical protein TERM 178 221739 - 221753 + g 78 -7.2 -4.54553 | TTGATTTTTAACTCT GATTTG AGG CAAATC TTTCTTGTCTTTGTG TERM 179 222497 - 222516 + g 95 -9.4 -4.54047 | TATTTAATACTCTTC CTCTTTGT AATA ACAAAGAG TTTTCTGTAAAGTAA Ava_B0200 224775 - 223174 - | hypothetical protein Ava_B0201 225156 - 224824 - | hypothetical protein Ava_B0202 226589 - 225219 - | Serine/threonine protein kinase Ava_B0203 226867 - 226619 - | hypothetical protein TERM 180 226837 - 226848 + g 71 -3 -5.02074 | opp_overlap 226833 226837, overlap 226833 TAAAGTTGAAACAAA TCAA GGTT TTGA TTTTTTCGAGCGTAA Ava_B0204 227528 - 226884 - | K+ transporting ATPase, KdpC subunit Ava_B0205 227800 - 227528 - | hypothetical protein Ava_B0206 229970 - 227823 - | potassium-transporting ATPase subunit B TERM 181 229320 - 229309 - G 75 -5.8 -4.63486 | overlap 229310 229311 ATCCGGTCAATAAAA CCCT GACC AGGG TCGGCGGTGATACGA TERM 182 229682 - 229670 - G 71 -3.4 -4.9448 | AGTTAGCAAACAAAA CTGT GAAAA ACAG AATTAAGGTAATGAT Ava_B0207 231802 - 230057 - | potassium-transporting ATPase subunit A TERM 183 232071 - 232081 + H 70 -2.6 -5.07275 | CTTATTTTTTCTTGA TAAA GCG TTTA TTTTTCTATATCTAG TERM 184 232854 - 232841 - g 71 -4.5 -4.68593 | overlap 232842 CCCATGATTTAAAAA CCCCA CTTT TGGGA GCAATTGAAACTATC Ava_B0208 232366 - 233505 + | periplasmic sensor Signal transduction histidine kinase Ava_B0209 233507 - 234178 + | two component LuxR family transcriptional regulator TERM 185 234960 - 234982 + T 86 -5.7 -5.38047 | ATCTACTGTATATTT TTAAGCTGA GTTAG TTAGCTTAA TTTTTTCTCTAGGTA TERM 186 235472 - 235451 - T 73 -5.9 -4.52857 | AGTTTTTAGAGAAAA GGCATTTAA TTAT TTAAAAGCC TTCAAAGAATACAAG Ava_B0210 236533 - 235601 - | hypothetical protein Ava_B0211 237264 - 236710 - | hypothetical protein Ava_B0212 238076 - 237447 - | ABC transporter-like Ava_B0213 238992 - 238063 - | oligopeptide/dipeptide ABC transporter, ATP-binding protein-like Ava_B0214 239885 - 239010 - | binding-protein dependent transport system inner membrane protein Ava_B0215 240874 - 239882 - | binding-protein dependent transport system inner membrane protein Ava_B0216 242595 - 240886 - | extracellular solute-binding protein TERM 187 242019 - 242035 + g 70 -5.1 -4.42765 | CTAAGCTAGCGAGTT TGTCAAC AAA GATGACA TTTGGTTTTTTGAGG Ava_B0217 245158 - 242606 - | TonB-dependent siderophore receptor TERM 188 244864 - 244881 + g 75 -8.5 -3.74347 | opp_overlap 244863 CACTCAGGATATTAC CTTCACT GTTG AGTGAAG TTTGCAGTTTGTCAG TERM 189 244918 - 244935 + g 73 -7.1 -4.08317 | opp_overlap 244918 TAGTTTCTAGAATGA CTTCTAA ACCA TTAGAAG TTTGGTTTAGGCTTA Ava_B0218 247803 - 245224 - | TonB-dependent siderophore receptor TERM 190 247009 - 246994 - G 71 -6.8 -4.08546 | ACCACGAATGATAAA GCCTGA TGAA CCAGGC CCTGCTCCACCGGTT TERM 191 248363 - 248399 + r 78 -10.9 -2.70298 | opp_overlap 248363 248365 248366, overlap 248362 248374 GACTTGTCTGAAAAA GAGTGTAGAGACGTAGC AGT GCTACGTCTCTACAAGG GTTCTGGTTAACACA TERM 192 248399 - 248363 - R 95 -10.9 -4.57073 | opp_overlap 248362 248363 248374, overlap 248365 248366 GACTTGTCTGAAAAA GAGTGTAGAGACGTAGC AGT GCTACGTCTCTACAAGG GTTCTGGTTAACACA TERM 193 248397 - 248365 - R 100 -17.9 -3.90048 | opp_overlap 248363 248362 248374, overlap 248363 248366 CTTGTCTGAAAAAGA GTGTAGAGACGTAGC AGT GCTACGTCTCTACAA GGGTTCTGGTTAACA TERM 194 248396 - 248366 - R 100 -21.4 -2.93708 | opp_overlap 248363 248362 248374, overlap 248365 248363 TTGTCTGAAAAAGAG TGTAGAGACGTAGC AGT GCTACGTCTCTACA AGGGTTCTGGTTAAC TERM 195 248374 - 248388 + r 75 -10 -2.87881 | opp_overlap 248366 248365 248363, overlap 248363 248362 AAAAGAGTGTAGAGA CGTAGC AGT GCTACG TCTCTACAAGGGTTC Ava_B0219 248674 - 248477 - | hypothetical protein Ava_B0220 249147 - 248770 - | zinc ABC transporter, permease protein Ava_B0221 249246 - 250316 + | hypothetical protein Ava_B0222 250774 - 250331 - | hypothetical protein Ava_B0223 251559 - 250795 - | ABC transporter-like Ava_B0224 252675 - 251569 - | periplasmic solute binding protein TERM 196 251979 - 251994 + g 88 -3.2 -5.75599 | overlap 251981 CAACAAAGGTTTTAC CCGCAA ATGG TTGCAG TTTTTTTGTGATTTC TERM 197 252228 - 252248 + g 71 -6.8 -4.08767 | CATGGTCATGCCCCT CGGTCGCT TCATT GGCGATCG TTTTCACGCCCTGAC TERM 198 252746 - 252724 - R 78 -9.2 -3.57971 | AGATCGATGCGTAAA GGAGTAAAGA AAC TCTTCACCCC ATTCCCCACTCCCTG Ava_B0225 253851 - 252781 - | delta-aminolevulinic acid dehydratase TERM 199 254548 - 254538 - g 70 -5.4 -4.41137 | TACAACGAGAAGAAA TTCG CAC CGAA ATTGCCCAATTAAAT TERM 200 255627 - 255652 + G 70 -9.9 -2.51871 | opp_overlap 255627, overlap 255626 255625 GGCAATGTTCAACTA TTCAGGTAGAT TTTA ATTTACCTGAA CGTTTTGATATGGAA Ava_B0226 254252 - 256096 + | threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase Ava_B0227 256149 - 256538 + | hypothetical protein TERM 201 257386 - 257409 + G 74 -6.2 -4.54343 | gap 1, opp_overlap 257385, overlap 257389 CATCACGAACATCAC TCACATCATTT AGA AAATGATG-GA TTTGTTTCAATTTCT Ava_B0228 256621 - 257682 + | cobalamin synthesis protein/P47K TERM 202 258465 - 258479 + G 73 -10 -3.05384 | TCGATTTTTCACAGC CCTCTG GTT CAGAGG TTGGATAGCAACAAA Ava_B0229 257794 - 258504 + | hypothetical protein Ava_B0230 258540 - 258890 + | phosphoribosyl-AMP cyclohydrolase TERM 203 259294 - 259257 - f 100 -18.6 -2.78384 | gap 1, opp_overlap 259293, overlap 259269 TTTTTCTCTACGAGA CGCTAACGCAAACGCCC ACCAG GGGCGTTCGCGT-AGCG GGACGCAAGTCCGGT TERM 204 259283 - 259269 - f 74 -8.5 -3.76393 | overlap 259257 AGACGCTAACGCAAA CGCCC ACCAG GGGCG TTCGCGTAGCGGGAC Ava_B0232 259520 - 260221 + | hypothetical protein Ava_B0233 260233 - 261027 + | hypothetical protein TERM 205 261667 - 261690 + G 76 -11 -2.62616 | CACAGTTACCGTTAC GCCACGCCAA GTAA TTGGCGTGGG TAATGTAGGACGTAC Ava_B0234 261074 - 261835 + | hypothetical protein Ava_B0235 263916 - 262414 - | secretion protein HlyD TERM 206 263793 - 263777 - G 73 -8.7 -3.55071 | TGATATCTTGTCAAA GCTGCGA CAC TCACAGC CATACCCACCACACC Ava_B0236 264200 - 263976 - | hypothetical protein Ava_B0237 266509 - 264362 - | bacteriocin-processing peptidase Ava_B0238 269758 - 266582 - | lanthionine synthetase C-like TERM 207 268752 - 268774 + g 75 -5.6 -4.70879 | CGCTGATAAAAACGC TGAATTTCCT CCA AGGAAGTACA TTTTTGCGCTTTGAC Ava_B0239 269867 - 271558 + | hypothetical protein Ava_B0240 272829 - 273155 + | hypothetical protein Ava_B0241 273829 - 273260 - | transposase Ava_B0242 274314 - 273859 - | transposase TERM 208 276217 - 276228 + G 70 -5.8 -4.25104 | GGTAGGCGAGTTTAT CCCA CGGC TGGG TTTTAATCCAGGCAC Ava_B0243 274535 - 276784 + | helicase RecD/TraA TERM 209 276866 - 276898 + G 93 -13.5 -2.80816 | CAGCAAAAGCCTTTC ACGATGCTCGACAGA CAT TCTGTCGAGCATCCC TCTCCTGCATCAGCC Ava_B0244 276799 - 277008 + | hypothetical protein Ava_B0245 277376 - 277143 - | hypothetical protein Ava_B0246 279679 - 277901 - | hypothetical protein TERM 210 278953 - 278913 - G 71 -8.3 -3.51825 | opp_overlap 278919, overlap 278916 GTAGGCGAAGTAGAA GAAGCAGGGGGAGAATT TACTAAC ATTTCCCCCCTTGCCTC CCCTGCTCTGATACT TERM 211 279627 - 279642 + g 78 -6 -4.90302 | opp_overlap 279584 279582, overlap 279634 ATGCTGGGGTAATCG CCACGC AGAA GCGCGG TTTCTTTTGTTCCTA Ava_B0247 280396 - 279692 - | hypothetical protein Ava_B0248 280810 - 280400 - | hypothetical protein TERM 212 280589 - 280600 + g 74 -4.4 -5.03314 | AGTATCTAAATAATT TTGC ATCC GCAA TTTTTTAAAGCTGGG Ava_B0249 280975 - 280820 - | hypothetical protein Ava_B0250 281705 - 281445 - | hypothetical protein TERM 213 281706 - 281696 - Gg 70 -5.4 -4.50241 | opp_overlap 281696, overlap 281686 281690 AAATATGAACCAAAA CTTG CCT CAAG ATTTAGACAGAGAAA TERM 214 281971 - 281955 - gR 70 -3.6 -4.89063 | CCACCGAAAAAGAAA CCAGGT GGGCA ACCAGG ACATCAAGGTAAAAC TERM 215 282106 - 282093 - gR 71 -2.3 -5.09245 | overlap 282095 GTAAAAGTAGAAAAA CACGC GGTA GCGCA ACTAGTAGAATGTCC Ava_B0251 281685 - 283157 + | transposase IS66 Ava_B0252 283713 - 283168 - | hypothetical protein Ava_B0253 284119 - 283706 - | hypothetical protein TERM 216 283804 - 283816 + g 82 -3.4 -5.47431 | TTGTTTCCACAATTG CCTT GACAA AAGG TTTTTTATCTATTCC Ava_B0254 285243 - 284173 - | hypothetical protein TERM 217 285454 - 285440 - R 100 -7.1 -5.55769 | CTTGATAATAAAAAA CCTGC ACACA GCAGG CAATTGACTAGGTAA Ava_B0255 285702 - 285493 - | hypothetical protein TERM 218 285753 - 285784 + H 89 -10.9 -4.16785 | overlap 285734 TGCCTTCGGGTGGGA GCGATCGCAGTTC TTTGCC GGAGTGCGATCGC TTTGATTTGTCATCT Ava_B0256 286118 - 286381 + | hypothetical protein Ava_B0257 286490 - 286774 + | hypothetical protein Ava_B0258 286771 - 287145 + | hypothetical protein TERM 219 287134 - 287145 + T 74 -3 -5.39221 | opp_overlap 287134, overlap 287131 ACAGAGCCGGAAGCA CTAA GTGC TTAG TTTTTTGGTTCTTGT Ava_B0259 287510 - 287142 - | hypothetical protein TERM 220 287556 - 287532 - R 81 -3.6 -5.53991 | opp_overlap 287536, overlap 287536 CAGGTATTAAAAAAA GAAAGACAGT ATAAA ACTGCCTTTG AGAAACAAATTGATA TERM 221 287552 - 287536 - R 76 -4.4 -5.23943 | opp_overlap 287536, overlap 287532 TATTAAAAAAAGAAA GACAGT ATAAA ACTGCC TTTGAGAAACAAATT Ava_B0260 287855 - 287583 - | hypothetical protein Ava_B0261 288587 - 287874 - | DNA polymerase III, epsilon subunit TERM 222 288627 - 288605 - R 95 -8.5 -5.00616 | opp_overlap 288608 TTCTCCTTGAAAAAA TAAGCAGCC GATAT AGCTGCTTA AATTAAATATCTACC Ava_B0262 289522 - 288638 - | hypothetical protein TERM 223 289381 - 289398 + g 95 -4.9 -5.86465 | gap 1, overlap 289391 TATATCCAGTCAATG CTC-TGTC TGC GACAAGAG TTTTTTTGTCTTGTT Ava_B0263 289782 - 289522 - | hypothetical protein TERM 224 289552 - 289562 + g 79 -6.8 -4.73432 | GTCATCATGAGTATT CTGC TTT GCAG TTTGTTTGTATTTAC Ava_B0264 290025 - 289828 - | hypothetical protein TERM 225 290087 - 290052 - R 100 -12.8 -5.08088 | opp_overlap 290050 290049, overlap 290055 290077 AATTTCTAACAAAAA TAAGCGGTTTGCTATT AACA AATAACAAACCGCTTG CGATTTAAATGGCAG TERM 226 290084 - 290055 - R 100 -14.5 -4.63592 | opp_overlap 290050 290049, overlap 290052 290077 TTCTAACAAAAATAA GCGGTTTGCTATT AACA AATAACAAACCGC TTGCGATTTAAATGG Ava_B0265 290657 - 290109 - | hypothetical protein TERM 227 290718 - 290679 - R 82 -10.9 -3.37499 | opp_overlap 290675 290672, overlap 290680 TAATATTTTAATTAA CTTGCGGGTGAATATCC TTGAGT AAATATTCACCCGCAAT AGACTATTTATTCAG TERM 228 290717 - 290680 - R 95 -14.4 -2.62018 | opp_overlap 290675 290672, overlap 290679 AATATTTTAATTAAC TTGCGGGTGAATATCC TTGAGT AAATATTCACCCGCAA TAGACTATTTATTCA Ava_B0266 290899 - 290726 - | hypothetical protein Ava_B0267 292608 - 290986 - | ATPase Ava_B0268 292856 - 292605 - | hypothetical protein TERM 229 292869 - 292893 + r 88 -10.8 -3.71672 | gap 1, overlap 292865 CATAATTTTTTGTGC CGGGGG-AAGT GTTC ACTTTCCCCCG TTAGTTTTACTGCCG Ava_B0269 293103 - 292900 - | hypothetical protein Ava_B0270 293550 - 293107 - | hypothetical protein TERM 230 293580 - 293608 + r 100 -11 -5.24129 | opp_overlap 293572 AATACTAGCATTAGC GTGATGCCCCGA AATTC TCAGGGCATCGC TTTTTTCTAACGGAA Ava_B0271 294676 - 293615 - | hypothetical protein Ava_B0272 294923 - 294735 - | ribosomal protein S7-like Ava_B0273 295191 - 294928 - | hypothetical protein TERM 231 295263 - 295284 + r 76 -2.3 -5.49579 | TCACATAACTGTTCA CGTAGAGTA TTGA TACTATATG TTTTGTTTTTTCTCA Ava_B0274 295517 - 295377 - | hypothetical protein TERM 232 295592 - 295566 - R 95 -5.2 -6.02546 | opp_overlap 295566 295568 CTAAATCAAAAAAAA CAGGAGAG TTTCTTCTTCG CTCTCCTG TTAGATAATGAGGTT Ava_B0275 296031 - 295639 - | hypothetical protein Ava_B0276 296267 - 296055 - | hypothetical protein TERM 233 296311 - 296289 - R 100 -10.6 -4.9792 | opp_overlap 296289 TACCTCATACAAAAA GCGGTCTGCT GTT AACAAACCGC TTACGTTTTTGATGT Ava_B0277 297225 - 296338 - | hypothetical protein Ava_B0278 297602 - 297330 - | hypothetical protein Ava_B0279 298234 - 297746 - | hypothetical protein TERM 234 298264 - 298298 + r 78 -5.6 -4.91852 | TTTACTTGGATAAAA GGCGATCGCGGAGTTT ACC AGACAGAGCGATTGCC TTTGTTTTTGCTGAC TERM 235 298310 - 298342 + r 85 -9.2 -4.06502 | TGCCTTTGTTTTTGC TGACTACGTTGTGG CTTCC CCACAACGCACTCA TTTGATTTCGGCGTA TERM 236 298351 - 298361 + r 81 -8.2 -4.34737 | GCACTCATTTGATTT CGGC GTA GCCG TTTCTTAATTGGTCA TERM 237 298454 - 298495 + r 83 -8.7 -4.32857 | opp_overlap 298451 298456 298458, overlap 298456 TTTCATAACCAACAG CACAGGGCTGTAGAGAGGA TTTG TCTTCTGTGCAGCCATGAG TTTCTGTTTAAAAAG TERM 238 298456 - 298493 + r 73 -9.9 -2.51057 | opp_overlap 298451 298456 298458, overlap 298454 TCATAACCAACAGCA CAGGGCTGTAGAGAGGA TTTG TCTTCTGTGCAGCCATG AGTTTCTGTTTAAAA TERM 239 298510 - 298536 + r 85 -9.4 -4.10552 | opp_overlap 298510 GTTTCTGTTTAAAAA GCGATCGCTACT AGG AGCAGCAATCGC TTTGATTTACTAGGA TERM 240 298536 - 298510 - R 100 -13.8 -4.56597 | opp_overlap 298510 GTTTCTGTTTAAAAA GCGATCGCTACT AGG AGCAGCAATCGC TTTGATTTACTAGGA Ava_B0280 299062 - 298772 - | hypothetical protein TERM 241 300749 - 300761 + G 72 -6.3 -4.30719 | opp_overlap 300748 TTGGGTAGCGAACAC GGTAA AAT TTACC TTTCTTCTGCCGACG Ava_B0281 299393 - 302590 + | hypothetical protein TERM 242 304194 - 304170 - g 74 -9.9 -3.16492 | opp_overlap 304169 304184, overlap 304168 TTAGAGCGAGTAATA GCCGCACGCCA GAG TGGAGTGCGTC ATCCATTGCTACTTA TERM 243 304844 - 304854 + G 75 -5.4 -4.76041 | opp_overlap 304844 TCAACTTTTAAAGGA TGGA TTT TCCA TTTTTACTGAGTCTA TERM 244 305521 - 305543 + G 80 -10 -3.58305 | opp_overlap 305525, overlap 305525 CTCGGTTTAACGTCT TAAAGCGTCA GGT TGATGCTTTA TTTCCACCATTGATT TERM 245 305525 - 305539 + G 74 -6.4 -4.42464 | opp_overlap 305525, overlap 305521 GTTTAACGTCTTAAA GCGTCA GGT TGATGC TTTATTTCCACCATT Ava_B0282 302724 - 306029 + | Type III restriction enzyme, res subunit Ava_B0283 306122 - 306457 + | hypothetical protein Ava_B0284 306457 - 306819 + | hypothetical protein TERM 246 306823 - 306853 + T 71 -9.1 -3.25823 | gap 1, opp_overlap 306824, overlap 306824 ATGAGTGCGTGAACT ACCTACACTG-ACC TGAC GGTACAGTGTAGGC TTCCTGTCCAACAGA TERM 247 306852 - 306824 - T 85 -12.6 -2.71364 | gap 1, opp_overlap 306823 306824 TGAGTGCGTGAACTA CCTACACTG-ACC TGAC GGTACAGTGTAGG CTTCCTGTCCAACAG TERM 248 306824 - 306852 + T 84 -12.6 -2.55351 | gap 1, opp_overlap 306824, overlap 306823 TGAGTGCGTGAACTA CCTACACTG-ACC TGAC GGTACAGTGTAGG CTTCCTGTCCAACAG Ava_B0285 308206 - 306821 - | IS891/IS1136/IS1341 transposase Ava_B0286 308855 - 308277 - | exonuclease Ava_B0287 309936 - 308926 - | hypothetical protein TERM 249 309925 - 309937 + g 77 -4.9 -4.92314 | ATTACGTGCTTTGTT TATGA AAT TCATA TTTTTGTAACTTGCT Ava_B0288 310546 - 310202 - | Excalibur Ava_B0289 311433 - 310618 - | hypothetical protein Ava_B0290 312189 - 311506 - | SNase-like nuclease Ava_B0291 313548 - 312370 - | glutathionylspermidine synthase-like TERM 250 313176 - 313189 + g 79 -6.7 -4.71418 | opp_overlap 313175, overlap 313188 TCTTACCAAAATGAT TGGCA ACTA TGCCA TTTATTTTGAATGTT Ava_B0292 314675 - 313545 - | hypothetical protein Ava_B0293 315256 - 314906 - | hypothetical protein TERM 251 315680 - 315656 - g 76 -7.9 -4.14472 | TTAACATCGCCAAAA TTGTCTTTGAC CAA GCCAAAGCCAA AAGGGTAAAGCAACC Ava_B0294 315460 - 316407 + | acid phosphatase class B TERM 252 316487 - 316509 + T 81 -8.6 -4.08767 | CCCAGTAATTATGGA GTTATTTTGA GAG TCAGAATAAC TTTTAGCAGGCTCAG Ava_B0295 316797 - 316591 - | helix-turn-helix protein, CopG Ava_B0296 317754 - 317206 - | hypothetical protein TERM 253 317869 - 317881 + H 71 -4.9 -4.56736 | opp_overlap 317852, overlap 317852 ATCTAGCTGTTTACC TAAGA TGG TCTTA TTTTGATTATTCCCT Ava_B0297 318216 - 318824 + | hypothetical protein Ava_B0298 318829 - 319224 + | hypothetical protein TERM 254 319989 - 319973 - gf 100 -3.8 -6.10295 | overlap 319979 TCAATACAAAAAAAA GAAATT GAAAA AATTTC CGCAATATTATATGT TERM 255 320804 - 320793 - gf 75 -3 -5.24515 | AAGAAATAAATAAAA TTGA AGAC TCAA ATAAAGATACAATAA TERM 256 320907 - 320897 - g 70 -5.4 -4.50241 | opp_overlap 320897, overlap 320887 320891 AAATATGAACCAAAA CTTG CCT CAAG ATTTAGACAGAGAAA Ava_B0299 319565 - 320941 + | TPR repeat-containing protein TERM 257 321172 - 321156 - gf 70 -3.6 -4.89063 | CCACCGAAAAAGAAA CCAGGT GGGCA ACCAGG ACATCAAGGTAAAAC TERM 258 321307 - 321294 - gf 71 -2.3 -5.09245 | overlap 321296 GTAAAAGTAGAAAAA CACGC GGTA GCGCA ACTAGTAGAATGTCC Ava_B0300 320886 - 322358 + | transposase IS66 Ava_B0301 322506 - 322838 + | hypothetical protein TERM 259 323044 - 323018 - T 81 -9.6 -3.75229 | overlap 323022 TAAACCATAGCTAAA TCAATCTTGTAG CGA CTACAAGACTAA CTCATACAACTGGCT TERM 260 323040 - 323022 - T 82 -10.4 -3.55866 | overlap 323018 CCATAGCTAAATCAA TCTTGTAG CGA CTACAAGA CTAACTCATACAACT Ava_B0303 323994 - 323644 - | hypothetical protein Ava_B0304 325228 - 324041 - | aminotransferase, class V Ava_B0305 326220 - 325261 - | hypothetical protein TERM 261 325908 - 325886 - G 76 -7.8 -4.22338 | ACGAGAATTTCAAAA TTAGGATGAT TAG ACCATCCCAA AGCTGATGCAGTTAG TERM 262 326171 - 326190 + g 74 -5 -4.88067 | GCAAGCAAAATATCT TTATGAGC TTCC GCACATAA TTTTTCTAACTGAAT Ava_B0306 328064 - 326238 - | hypothetical protein Ava_B0307 329818 - 328199 - | Type III restriction enzyme, res subunit Ava_B0308 332196 - 329890 - | hypothetical protein TERM 263 332071 - 332091 + g 76 -6.8 -4.43037 | AGCAAGCTCATTTTC CCAGGTTC CCTCA GAACCCGG TTTCATTTTTGTTAA Ava_B0309 332711 - 332199 - | hypothetical protein TERM 264 332609 - 332590 - G 78 -2.2 -5.47218 | TTTGATTTAAAAAAA TCTAAAAA AAAT TTATTAGA GTTAGCGATCGCCTC Ava_B0310 333704 - 332931 - | phosphoadenosine phosphosulfate reductase TERM 265 333184 - 333168 - G 90 -10.9 -4.0031 | AGCCTCAGCAAATAA CTCAGGA TGT TCCTGAG CCAGCATTACCCATT TERM 266 333243 - 333229 - G 73 -3.5 -5.02645 | opp_overlap 333238 AAGAAACAAAAGAAA CAGCC TGAGC GGCTA CGCCATTGGTAATAT Ava_B0311 337224 - 333718 - | hypothetical protein TERM 267 336295 - 336312 + g 84 -3.5 -5.46129 | gap 1, overlap 336296 336298 ATCCTTTATTTCATC TGG-TAGA TTT TCTATCCA TTTTTTCGTTTGTTC Ava_B0312 338165 - 337233 - | hypothetical protein Ava_B0313 338293 - 340533 + | hypothetical protein Ava_B0314 340897 - 340622 - | hypothetical protein Ava_B0315 342632 - 341103 - | hypothetical protein Ava_B0316 343676 - 342666 - | hypothetical protein TERM 268 343296 - 343285 - G 70 -5.8 -4.26903 | opp_overlap 343280 343285 GTTAGGTTATCAAAA TGCC ATTT GGCA TCTAGTCTTACCTTT Ava_B0317 344897 - 343956 - | hypothetical protein TERM 269 344485 - 344503 + g 100 -11.8 -3.89971 | opp_overlap 344484 344483 GATATGGGGAAAATT TGGGAACT ATT AGTTCCCA TTTCATCTGCTTGTG TERM 270 344530 - 344548 + g 100 -11.8 -4.00486 | overlap 344520 TGTGCTTCCTCAATT TGGGAACT ATT AGTTCCCA TTATTATGTTGTCAA Ava_B0318 345246 - 345004 - | XRE family transcriptional regulator Ava_B0319 345408 - 346436 + | hypothetical protein TERM 271 346461 - 346444 - f 88 -8.4 -4.55798 | opp_overlap 346444 346441 CAGTTTAAAGGAAAA GTGGGC TTCGTC GCCCAC TCAGTTTAACTGTTT Ava_B0320 346557 - 347060 + | hypothetical protein TERM 272 347100 - 347067 - f 73 -6.8 -4.35483 | overlap 347068 TGCGATTAGAAGAAA CTCGCCCGAATT GCCTGTGATT AATTCGGGCGAT CGCTAGTATTCAGAA TERM 273 347099 - 347068 - f 79 -10.3 -3.20808 | overlap 347067 GCGATTAGAAGAAAC TCGCCCGAATT GCCTGTGATT AATTCGGGCGA TCGCTAGTATTCAGA Ava_B0321 347166 - 347993 + | hypothetical protein Ava_B0322 348015 - 348473 + | hypothetical protein Ava_B0323 348500 - 349396 + | hypothetical protein Ava_B0324 349564 - 349788 + | hypothetical protein Ava_B0325 349785 - 350480 + | hypothetical protein TERM 274 350715 - 350737 + G 84 -11.4 -3.08133 | TGCTTAAACCCCTAG CTTGGACAGA CGC TCTGTCTAAG TTGCGTGACTCAATC Ava_B0326 350477 - 351076 + | DNA-N1-methyladenine dioxygenase TERM 275 351189 - 351160 - f 100 -8.6 -4.86385 | ATCCTTAAAAACAAA TTCCCCAGACTG TTAGAG CAGTCGGAGGAA TGGAGATTTTTAATT TERM 276 351452 - 351439 - g 90 -2.3 -5.96894 | opp_overlap 351439 AGGTAAACAAAAAAA TCCTG AAGG CTGGA TTTATAAATCTCAAG TERM 277 351882 - 351860 - g 86 -12.1 -2.99471 | opp_overlap 351859 CCATCTGGACATACA GTATTGCCC CATGT GGGCAATAC ATCTATATATACAAA TERM 278 352722 - 352708 - g 89 -7.2 -4.95484 | overlap 352703 CAGCATCAAAGAAAA GCTTTT TCA AAAAGC TAATGCTCAAAAAAC Ava_B0327 351305 - 352813 + | hypothetical protein Ava_B0328 352816 - 354165 + | DnaB-like helicase Ava_B0329 354173 - 354565 + | hypothetical protein Ava_B0330 354562 - 355323 + | C-5 cytosine-specific DNA methylase Ava_B0331 355320 - 355814 + | hypothetical protein Ava_B0332 355816 - 357081 + | hypothetical protein Ava_B0333 357117 - 357389 + | hypothetical protein Ava_B0334 357386 - 357766 + | hypothetical protein Ava_B0335 358188 - 357889 - | transcription regulator TERM 279 358155 - 358169 + g 85 -4.2 -5.42265 | CTACCATTTCTGGGG TCAGGG CAA CACTGA TTTTTTCTACTTTAG TERM 280 358555 - 358527 - H 71 -9.1 -3.15544 | opp_overlap 358507 358505 358527, overlap 358507 358505 GCTGATCGTCAGCAA CCCTAATTTTT TTAGAGG AAAAATTAGGG TTGATCGGGCAGGAG TERM 281 358527 - 358555 + H 79 -10.5 -3.14132 | opp_overlap 358507 358505 358527, overlap 358507 358505 GCTGATCGTCAGCAA CCCTAATTTTTTT AGA GGAAAAATTAGGG TTGATCGGGCAGGAG Ava_B0336 358661 - 359485 + | DNA/RNA non-specific endonuclease Ava_B0337 359901 - 359494 - | nuclease A inhibitor-like TERM 282 359957 - 359975 + H 78 -3.9 -5.29846 | GCTTCTTTATCTGCA TTTTGGT CAGAC ACCAGAA TTTTTATTTAGACTT Ava_B0338 360063 - 360467 + | hypothetical protein Ava_B0339 360476 - 360676 + | hypothetical protein Ava_B0340 361042 - 360695 - | hypothetical protein Ava_B0341 361482 - 361072 - | hypothetical protein Ava_B0344 362947 - 362276 - | hypothetical protein Ava_B0345 363724 - 363416 - | hypothetical protein Ava_B0346 364071 - 364580 + | NUDIX hydrolase TERM 283 364876 - 364833 - gT 75 -3.2 -5.18357 | gap 1 CAAGTGATTAAAAAA GTTACACGGCGGGAC-GAA CCAGTTT TTCTGTACCGTCGCATAAC TGCTGCATAAATCGG Ava_B0348 365112 - 364834 - | hypothetical protein Ava_B0347 364620 - 364886 + | hypothetical protein TERM 284 365018 - 365032 + gF 72 -8.5 -3.54109 | CAGTAACCACTTTTG CCCCG CAAGT CGGGG TTATCCTTGGGTTGA Ava_B0349 365204 - 365833 + | hypothetical protein Ava_B0350 366094 - 365903 - | hypothetical protein SEQUENCE gi|75812629|ref|NC_007411.1| Anabaena variabilis ATCC 29413 plasmid B, complete sequence (length 35762) Ava_A0001 957 - 10 - | hypothetical protein TERM 1 473 - 451 - G 85 -5.6 -5.10154 | opp_overlap 451 454, overlap 445 ATGTAAAATTAAAAA TTTTAGCTGA CAT CCAGCTATAA CTTTATTCCTTATTA Ava_A0002 2888 - 1035 - | protein serine/threonine phosphatase Ava_A0003 3545 - 2982 - | FHA domain-containing protein Ava_A0004 5078 - 3684 - | von Willebrand factor, type A Ava_A0005 5519 - 5136 - | hypothetical protein Ava_A0006 7369 - 5591 - | von Willebrand factor, type A Ava_A0007 8856 - 7414 - | hypothetical protein Ava_A0008 9773 - 8856 - | hypothetical protein Ava_A0009 10742 - 9870 - | hypothetical protein Ava_A0010 11968 - 10751 - | hypothetical protein Ava_A0011 13061 - 11976 - | hypothetical protein TERM 2 12523 - 12500 - G 93 -9 -4.43755 | opp_overlap 12500, overlap 12515 ACAACAAACCCAAAA TTGAAAATCC TAAA GGATCTTCAA TACCTTGAAACTCTG TERM 3 13090 - 13102 + r 71 -9.1 -3.25491 | ATTATCTTATTCTTG GGGGA TTT TCCCC TTGATAATCTGGGTT Ava_A0012 15289 - 13076 - | hypothetical protein TERM 4 14887 - 14873 - G 79 -8.6 -4.09455 | opp_overlap 14872 ATTAACATCAAATAA GTTAGG TTG CCTAAC AGTTTTAGAGTCAAA Ava_A0013 16199 - 15294 - | hypothetical protein Ava_A0014 17013 - 16189 - | hypothetical protein Ava_A0015 17781 - 17029 - | hypothetical protein Ava_A0016 19015 - 18629 - | hypothetical protein Ava_A0017 19615 - 19055 - | hypothetical protein TERM 5 19240 - 19260 + g 73 -2.6 -5.09204 | overlap 19243 TCTTAAGAAAATCTT CACTTCTA CTGGT TAGAATTG TTTTTGTTCCACTAT TERM 6 19492 - 19526 + g 77 -10.2 -3.22562 | opp_overlap 19491 19489, overlap 19489 19487 CGACCAACCCAATAC TTGCAATGTTGTGTAT TTG ATAAACAACATTGCCA TATATTAATGTTTTA Ava_A0019 21319 - 20471 - | hypothetical protein Ava_A0020 21736 - 21326 - | hypothetical protein TERM 7 21674 - 21692 + g 76 -10.4 -2.99273 | opp_overlap 21673 21672, overlap 21673 21676 GAGTTTTTGTAAATC TACCAAGA TAG TCTTGGTA ATTTCTACTCCTGAA TERM 8 21727 - 21738 + g 71 -3 -5.06816 | CTAAAACAGTCTGCT CAAT CTTC ATTG TTTTTCTTCGACAAT Ava_A0021 22882 - 21920 - | ParB family protein TERM 9 22350 - 22371 + g 100 -11.7 -5.01042 | AGCAGCGTTTGAGAG TTACCCGTA ACGT TACGGGTAA TTTTTCCTTTAGCTT TERM 10 22806 - 22840 + g 73 -2.7 -5.14563 | overlap 22807 CTGTCAGGCTGCGTA GCAGTGGTACTGCTG CCAAA CAGCAGTTCGACGGG TTTTTTAATGGCGGC Ava_A0022 23652 - 22879 - | cobyrinic acid a,c-diamide synthase TERM 11 23892 - 23852 - H 100 -15 -2.83271 | gap 1, opp_overlap 23852 23855 23856, overlap 23862 GGATTTGTACAAGGA CGTATTGAAACTTCGTGGC TTGC GCCACGAAGTTTCAA-ATG TTTGTTTTTCTCCAT TERM 12 23852 - 23892 + H 100 -17.2 -4.97405 | gap 1, opp_overlap 23852 23862, overlap 23855 23856 GGATTTGTACAAGGA CGTATTGAAACTTCGTGGC TTGC GCCACGAAGTTTCAA-ATG TTTGTTTTTCTCCAT TERM 13 23855 - 23890 + H 100 -17.8 -4.09508 | opp_overlap 23852 23862, overlap 23852 23856 TTTGTACAAGGACGT ATTGAAACTTCGTGGC TTGC GCCACGAAGTTTCAAA TGTTTGTTTTTCTCC TERM 14 23856 - 23889 + H 100 -21.3 -3.04078 | opp_overlap 23852 23862, overlap 23855 23852 TTGTACAAGGACGTA TTGAAACTTCGTGGC TTGC GCCACGAAGTTTCAA ATGTTTGTTTTTCTC TERM 15 23883 - 23862 - H 100 -14.5 -3.67564 | opp_overlap 23856 23855 23852, overlap 23852 AAGGACGTATTGAAA CTTCGTGGC TTGC GCCACGAAG TTTCAAATGTTTGTT Ava_A0023 24291 - 25388 + | hypothetical protein TERM 16 25448 - 25468 + F 100 -6.9 -5.5604 | opp_overlap 25451 TCAGGTATTTTTGAA TCAGGCT TTAAATT AGCCTGA TTTTTTATTACTTAC Ava_A0024 25676 - 25867 + | hypothetical protein Ava_A0025 25864 - 27399 + | resolvase Ava_A0026 27421 - 27804 + | hypothetical protein Ava_A0027 28407 - 27967 - | hypothetical protein TERM 17 28590 - 28578 - H 74 -4.1 -5.1634 | ACAAATACACAAAAA GCTTC CCA AAAGC AAATTTGATTTAGGT TERM 18 29120 - 29072 - g 70 -9.5 -2.79505 | opp_overlap 29079 29079, overlap 29071 29111 ACATTCTACCCAAAG GCTTGCACTGTTGCCTCAGCACA AGT TGTGCTGAGGCAACAAGTTGTGC TGAGGCAACAAGTTG TERM 19 29079 - 29132 + G 100 -20 -3.40403 | gap 2, opp_overlap 29072 29071 29111 29129, overlap 29079 ACCCAAAGGCTTGCA C-TGTTGCCTCAGCACAAGTTG-TGC TGAG GCAACAAGTTGTGCTGAGGCAACAAG TTGTGCTGAGGCAAC TERM 20 29079 - 29131 + G 100 -20.2 -2.64099 | gap 1, opp_overlap 29072 29071 29111 29129, overlap 29079 ACCCAAAGGCTTGCA CTGTTGCCTCAGCACAAGTTG-TGC TGAG GCAACAAGTTGTGCTGAGGCAACAA GTTGTGCTGAGGCAA Ava_A0028 28711 - 29751 + | hypothetical protein Ava_A0029 29751 - 31100 + | DnaB helicase Ava_A0030 31308 - 31826 + | hypothetical protein Ava_A0031 32042 - 33127 + | phage integrase Ava_A0032 35751 - 33628 - | TPR repeat-containing serine/threonin protein kinase SEQUENCE gi|75812661|ref|NC_007412.1| Anabaena variabilis ATCC 29413 plasmid C, complete sequence (length 300758) Ava_C0001 1703 - 399 - | major facilitator transporter TERM 1 1012 - 997 - G 80 -4.8 -5.14563 | overlap 982 GTTCCTACCAAAAAA TTTTTG ATAG CAAAAA ATATCAATAATGCCA TERM 2 1072 - 1085 + g 73 -3.8 -5.01422 | overlap 1070 1074 CAGCCAGACACCGCC TCCC CTAGCA GGGA TTTGTTTTTCTCTAC Ava_C0002 10321 - 1718 - | amino acid adenylation TERM 3 2805 - 2793 - G 72 -6.3 -4.32046 | overlap 2788 CGGGGAAAAATCAAA GTTTC TGT GAAAC GAGAACGTATTTGCT TERM 4 10201 - 10218 + g 74 -4.9 -4.76193 | overlap 10210 10211 10213 GACAAGGGCTTTGGT CTATTCT TTTC GGAATAG TTTTCTGTTCTGGTT Ava_C0003 11169 - 10345 - | phytanoyl-CoA dioxygenase Ava_C0004 12241 - 11297 - | phosphopantetheine-binding Ava_C0005 14536 - 12368 - | AMP-dependent synthetase and ligase TERM 5 13799 - 13787 - G 71 -2 -5.14645 | opp_overlap 13787 ACAAGTTAATAAAAA TTCA GAGGT TGAA GTTTTGCATTTTTGT Ava_C0006 15410 - 14595 - | hypothetical protein Ava_C0007 17849 - 15453 - | condensation domain-containing protein TERM 6 16286 - 16296 + g 73 -5.4 -4.67982 | ATAAAATTGCTCCAT GCTT TAA AAGC TTTTGTTCAATAAAA TERM 7 17366 - 17356 - G 70 -2.6 -4.93296 | TTACCATTACAAAAA TTTT CAT AAAA AGCAAACACTTCTTT TERM 8 17726 - 17740 + g 72 -7.2 -3.96483 | opp_overlap 17725 ATAAATTTAGATTAC CTTGTA AAA TACAAG TTGTTTGGCTAAAAT Ava_C0008 18292 - 17852 - | phosphopantetheine-binding Ava_C0009 26724 - 18349 - | amino acid adenylation TERM 9 19179 - 19198 + g 71 -5 -4.61199 | overlap 19162 19161 CTACAATTATAGTTT GTAGCGAT ATTA ATTGCTGC TTTTCTATATGCGCT TERM 10 24096 - 24126 + g 78 -5.5 -4.98255 | gap 1, overlap 24084 GCACTGGTAGTTCTC CTGCTAG-TTGCTG TTCC CAGTAAGCTTGCAG TTTTTCTCCTTGAGA TERM 11 28795 - 28814 + G 100 -10 -4.62069 | opp_overlap 28795 CACTTTTGATTATAA CTTTCCGC CAGA GCGGGAAG TTTTTCAACTACCAA Ava_C0010 27512 - 30106 + | TonB-dependent siderophore receptor Ava_C0011 30108 - 31712 + | extracellular solute-binding protein TERM 12 32261 - 32272 + G 70 -5.8 -4.2558 | CTATTTGTTGTGCTG CACC TATT GGTG TTTTGCTAGAAGATG Ava_C0012 31828 - 32730 + | binding-protein dependent transport system inner membrane protein Ava_C0013 32727 - 33605 + | binding-protein dependent transport system inner membrane protein Ava_C0014 33733 - 34662 + | oligopeptide/dipeptide ABC transporter, ATP-binding protein-like Ava_C0015 34649 - 35266 + | ABC transporter-like TERM 13 35761 - 35775 + F 73 -7.2 -4.05788 | TCTACCTTGACCATT TTCTAC GTT GTAGAA TTTAATTTAGAGAAA Ava_C0016 35898 - 36065 + | hypothetical protein TERM 14 36107 - 36138 + F 78 -5.9 -4.8048 | opp_overlap 36107 36108 36110, overlap 36108 CTTCCTAGTAAACAA GCAGTAGCAGGTA ACTAGG TAACTGCTACTGG TTTTTCATATCAAAA TERM 15 36137 - 36108 - f 74 -9.4 -2.99704 | opp_overlap 36107 36108, overlap 36107 36110 TTCCTAGTAAACAAG CAGTAGCAGGTA ACTAGG TAACTGCTACTG GTTTTTCATATCAAA TERM 16 36108 - 36137 + F 78 -9.4 -3.47806 | opp_overlap 36108 36107 36110, overlap 36107 TTCCTAGTAAACAAG CAGTAGCAGGTA ACTAGG TAACTGCTACTG GTTTTTCATATCAAA Ava_C0017 36162 - 36764 + | hypothetical protein TERM 17 36833 - 36856 + F 91 -4.7 -5.8096 | opp_overlap 36833 AAATATATCATCAAA TGGTTAAGA GTTAAA TCTTAATCA TTTTTATTTTTTCTA Ava_C0018 37195 - 37644 + | hypothetical protein Ava_C0019 37828 - 38196 + | hypothetical protein TERM 18 38240 - 38203 - f 86 -6.6 -5.22006 | opp_overlap 38209 TCAGCATAATAAAAA TATAAACTGATAGTAA TTAATT CTATTATCAGTTTATA TAAAATGGACAAGTA Ava_C0020 38245 - 38466 + | hypothetical protein TERM 19 38613 - 38635 + G 76 -9.9 -3.32844 | gap 1, opp_overlap 38597 38612 AATACGTTGACATAC TCCCCA-GCC TAAA GGCGTGGGGA TTCTAGGCTCAAACA Ava_C0021 38456 - 38641 + | hypothetical protein Ava_C0022 39768 - 38644 - | IS891/IS1136/IS1341 transposase TERM 20 39846 - 39828 - R 81 -8.8 -4.04394 | opp_overlap 39827 39828, overlap 39829 CCTAAATTAAGCAAA GTCGCCCT TCA AGGGCGAG GCTTTAAACCCATGT TERM 21 39845 - 39829 - R 85 -12.3 -3.01914 | opp_overlap 39827 39828, overlap 39828 CTAAATTAAGCAAAG TCGCCCT TCA AGGGCGA GGCTTTAAACCCATG Ava_C0023 41812 - 40106 - | major outer membrane protein Ava_C0024 42990 - 41839 - | major facilitator transporter Ava_C0025 43667 - 43044 - | NAD(P)H dehydrogenase (quinone) TERM 22 43250 - 43268 + g 82 -2.4 -5.63645 | CATAGCTTCCGCCTC GTGTTG TAATTAC CAGCAC TTTTTTATCTTTTAA Ava_C0026 44899 - 43760 - | major facilitator transporter TERM 23 44877 - 44866 - G 70 -5.8 -4.30576 | GGGTGATGAGGAAAA TGGC TACT GCCA CAATGAACTGGGGTC Ava_C0027 45982 - 45083 - | AraC family transcriptional regulator Ava_C0028 46157 - 46810 + | transcriptional regulator Ava_C0029 47442 - 46864 - | hypothetical protein Ava_C0030 47642 - 49279 + | ATPase Ava_C0031 49404 - 49970 + | hypothetical protein TERM 24 50079 - 50041 - f 100 -26.4 -3.32498 | opp_overlap 50041 TACCTCATATATCAA TGTTTGACCCCCGATATA GGC TATATCGGGGGTCAAACA TTATGAAATCAATCA TERM 25 50041 - 50079 + F 100 -26.4 -3.33492 | opp_overlap 50041 TACCTCATATATCAA TGTTTGACCCCCGATATA GGC TATATCGGGGGTCAAACA TTATGAAATCAATCA Ava_C0032 50342 - 50872 + | hypothetical protein TERM 26 50894 - 50879 - f 72 -7.6 -3.75153 | TTCGTTTAACTGAAA CCAGTA GAAA TACTGG GGGATAGTTAGCTTG Ava_C0033 51340 - 53223 + | RNA-directed DNA polymerase TERM 27 53463 - 53449 - f 89 -7.8 -5.02074 | overlap 53453 TCACTCGTCAAAAAA GCCACC ACG AGTGGC ACAATTCCACAAGTG Ava_C0034 53523 - 53858 + | hypothetical protein TERM 28 54354 - 54373 + G 74 -8 -4.02334 | opp_overlap 54353 ACTAAAGCAGGAACT CGTAAAAA TAAG TTTTTACG TTTCTGGTGTACCTA TERM 29 54909 - 54895 - g 90 -4.2 -5.65927 | opp_overlap 54895 TATCTAAAGAAAAAA TCTCCG ACA CTGAGA TTATCTGCCAGCTAT Ava_C0035 53901 - 56708 + | hypothetical protein TERM 30 56825 - 56806 - f 76 -6.4 -4.37886 | GCATCTTGTAGAAAA GCCTTACC GTAG GGTAACGC GAACAGTGTTTCTAC Ava_C0036 56905 - 58200 + | transposase IS605 TERM 31 58659 - 58649 - g 71 -6.8 -4.15854 | AAACTCAGCCGAAAA GCTC AAA GAGC AACTTAAGAGCAAGG Ava_C0037 58383 - 59114 + | hypothetical protein TERM 32 59128 - 59158 + F 100 -14.2 -3.00022 | opp_overlap 59128 AATTCACCCTAATTA GTTGGTCATCTC TGCAATT GAGATGACCAAC TCTCTATCAGGTACA TERM 33 59158 - 59128 - f 95 -14.2 -2.7386 | opp_overlap 59128 AATTCACCCTAATTA GTTGGTCATCTC TGCAATT GAGATGACCAAC TCTCTATCAGGTACA TERM 34 59693 - 59675 - g 70 -9.6 -2.7898 | overlap 59672 CGCAAGATTCAATCA CCTGCTTG CAA CAAGCAGA AGCAGAACTCAAAAC Ava_C0038 59185 - 60336 + | hypothetical protein Ava_C0039 60378 - 60743 + | S23 ribosomal TERM 35 61177 - 61155 - g 89 -3.5 -5.72254 | overlap 61169 TCAAACAACAAAAAA TAGTAGAAA AAAAA TTCCCACTA GAGCCTGGGAAGCTG TERM 36 61188 - 61169 - g 100 -3.6 -6.00086 | overlap 61155 61180 ATAGTAGAAAAAAAA TTCCCA CTAGAGCC TGGGAA GCTGCATTTGCACTA Ava_C0040 60778 - 61554 + | hypothetical protein Ava_C0041 61579 - 63408 + | hypothetical protein TERM 37 63462 - 63485 + G 70 -7.4 -3.76968 | gap 1 TGGGCGATTGCCTCT GGC-ACTGCGC TCC GCGCAATCGCC TTTGGTGGGTGCCTT TERM 38 63674 - 63692 + G 73 -3.8 -4.94262 | overlap 63675 TATCAAGAAAATCTG GCTGGATG ACC CATCTAGG TTTGTTTTTGATGTA Ava_C0042 63405 - 64256 + | hypothetical protein TERM 39 64570 - 64533 - g 71 -10.1 -2.62613 | opp_overlap 64543, overlap 64532 64530 CGGTAGCTCAAACAG TTTCATCGAAGTATTCA AATT TGAACACTTCGATAAAT AAGACAAAACAAACC Ava_C0043 64262 - 65674 + | hypothetical protein TERM 40 66281 - 66293 + G 72 -6.3 -4.24948 | ACCAAGATTTTGGTA TCGTA TTA TACGA TTTTAAGTATGCTAG TERM 41 67209 - 67195 - g 100 -7.8 -5.48623 | AAATATAAACAAAAA TCCCGC TCA ACGGGA GGGGGTAAAGCCAGC Ava_C0044 65758 - 67584 + | hypothetical protein TERM 42 68164 - 68152 - g 71 -3.4 -4.96501 | GTTCAGAAAAACAAA TCGT TATCT ACGA ACAAAATAGCGAAGG TERM 43 69175 - 69194 + G 72 -7.2 -3.96216 | GAGACACTGTTAGCA TTCATCGC CGCA GTGATGAA TTATTTGGGTGGGAG Ava_C0045 67671 - 70178 + | hypothetical protein TERM 44 70345 - 70335 - f 72 -4 -4.90013 | overlap 70338 CAATTTAACGAAAAA TTAC TAC GTAA AGCTCACGCAGATAC Ava_C0046 70477 - 71310 + | hypothetical protein Ava_C0047 71339 - 71488 + | hypothetical protein Ava_C0048 71562 - 72980 + | hypothetical protein Ava_C0049 73009 - 73851 + | hypothetical protein Ava_C0050 80961 - 74071 - | hemolysin-type calcium-binding region TERM 45 78815 - 78799 - G 70 -7.9 -3.67597 | overlap 78796 78800 CTGTCCACTCAAGAA GCCGTGG CGA CCACGGA AATCATGATGAGCGA TERM 46 78814 - 78800 - G 81 -11.4 -2.80344 | overlap 78796 78799 TGTCCACTCAAGAAG CCGTGG CGA CCACGG AAATCATGATGAGCG TERM 47 80406 - 80424 + g 75 -8.2 -3.87104 | ATACTATATTTGACT GCATCAAG CCA TTTGATGC TTCTTCTCCTCTCCA TERM 48 81330 - 81351 + r 76 -5.1 -5.01553 | opp_overlap 81330 81331, overlap 81331 GGACAATATTAGAAA CTTGTCTGG ATAT CCAGACGAC TTTTCTTTATGAATT TERM 49 81331 - 81350 + r 75 -8.6 -3.59305 | opp_overlap 81330 81331, overlap 81330 GACAATATTAGAAAC TTGTCTGG ATAT CCAGACGA CTTTTCTTTATGAAT Ava_C0051 82154 - 81444 - | hypothetical protein Ava_C0052 82994 - 82383 - | abortive infection protein TERM 50 82645 - 82632 - G 86 -6.7 -4.96848 | GCCGCGATACAAAAA CTCCT GTAC AGGAG AAGACACGCCCACAA TERM 51 82767 - 82790 + g 79 -6.8 -4.67353 | gap 1, overlap 82770 82771 GGTGGGTAGAGCGAT CGCTTTGAGAG AAG CTCTCA-AGTG TTTTTGAGTAAATCC TERM 52 82770 - 82788 + g 77 -8.2 -3.95214 | overlap 82767 82771 GGGTAGAGCGATCGC TTTGAGAG AAG CTCTCAAG TGTTTTTGAGTAAAT TERM 53 82771 - 82787 + g 71 -9.5 -2.96405 | overlap 82770 82767 GGTAGAGCGATCGCT TTGAGAG AAG CTCTCAA GTGTTTTTGAGTAAA TERM 54 82947 - 82931 - G 70 -5.9 -4.31043 | overlap 82933 ATACAACAGGCAAAA TATAGGT AAA ACCTACA ATCAGAATTACTTTC Ava_C0053 85249 - 82997 - | hypothetical protein Ava_C0054 86204 - 85263 - | hypothetical protein TERM 55 85449 - 85479 + g 83 -11.2 -3.51232 | opp_overlap 85457, overlap 85444 AAAACCACTTTCAAG TCGAACGATCACTG TAA CAGTGATCGCTCCA TTGCTTTGCGAAACA Ava_C0055 86862 - 86197 - | hypothetical protein Ava_C0056 87438 - 87025 - | hypothetical protein Ava_C0057 87474 - 87716 + | hypothetical protein TERM 56 87725 - 87758 + F 75 -9.9 -2.76404 | gap 1, opp_overlap 87724 87725 87728 87733, overlap 87733 ATTCTAATTAGAAAT TC-AGAAAATTGTTTG TAC CAGACAATTTTCTCGA TCAATTTTAACTCCA TERM 57 87754 - 87728 - f 72 -9.6 -2.7361 | opp_overlap 87725 87733, overlap 87724 87725 87733 CTAATTAGAAATTCA GAAAATTGTTTG TAC CAGACAATTTTC TCGATCAATTTTAAC TERM 58 87733 - 87749 + F 73 -5.9 -4.43501 | opp_overlap 87733 87728 87724 87725, overlap 87725 TAGAAATTCAGAAAA TTGTTTG TAC CAGACAA TTTTCTCGATCAATT TERM 59 88157 - 88146 - g 71 -3 -5.01535 | overlap 88156 TTAGAACCACAAAAA GATA TAGA TATC GTCCGCAGACAAAGT Ava_C0058 87780 - 88970 + | tetrahydrofolate dehydrogenase/cyclohydrolase TERM 60 89418 - 89435 + G 74 -7 -4.36914 | overlap 89417 TTTCGCCTAGCAATT GCTGCT CCTTAC AGCAGC TTTTATGGCAACAAG Ava_C0059 89006 - 89800 + | hypothetical protein Ava_C0060 89895 - 92615 + | DEAD/DEAH box helicase-like TERM 61 92648 - 92622 - f 80 -11 -3.16618 | opp_overlap 92622, overlap 92620 92625 AATCAATAGTTAAGA TAATCCTATCCA GCT TGGGTAGGATTA TTTTTTTAGTAATTC TERM 62 92622 - 92648 + F 100 -13.2 -5.58074 | opp_overlap 92622 92620 92625 AATCAATAGTTAAGA TAATCCTATCCA GCT TGGGTAGGATTA TTTTTTTAGTAATTC TERM 63 92645 - 92625 - f 74 -8.3 -3.71517 | opp_overlap 92622, overlap 92622 92620 CAATAGTTAAGATAA TCCTATCCA GCT TGGGTAGGA TTATTTTTTTAGTAA TERM 64 92905 - 92872 - g 71 -9.7 -2.64472 | gap 1, overlap 92868 92890 TATGCTGTAAATCTA GGGTATCAGG-TGAAA ATA TCTCATCCTGAAACCC AACAATATAATAAAT Ava_C0061 92716 - 93462 + | hypothetical protein Ava_C0062 93491 - 93715 + | hypothetical protein Ava_C0063 93783 - 94781 + | hypothetical protein TERM 65 95074 - 95058 - g 74 -9.5 -3.25758 | opp_overlap 95057 95056 AGATAATTAACTTAA CTGAGAT AAC ATCTCAG CCTTTCATAAATAAC Ava_C0064 94784 - 95266 + | hypothetical protein Ava_C0065 95272 - 95694 + | hypothetical protein TERM 66 95876 - 95861 - g 71 -4 -4.84359 | TTATTTCCAGAAAAA TGGTTA GAAT CAACCA TACCTATTAATAAAC Ava_C0066 95738 - 96466 + | hypothetical protein Ava_C0067 96463 - 97185 + | hypothetical protein Ava_C0068 97188 - 97784 + | hypothetical protein Ava_C0069 97772 - 98629 + | UBA/THIF-type NAD/FAD binding fold TERM 67 98640 - 98668 + F 100 -9.1 -4.89339 | opp_overlap 98640 AATAGCTTACGCAAA TATATCCCAAA AACTAAA TTTGGGATATA TTTTTATGAATCGTT TERM 68 98668 - 98640 - f 78 -9.1 -3.66646 | opp_overlap 98640 AATAGCTTACGCAAA TATATCCCAAA AACTAAA TTTGGGATATA TTTTTATGAATCGTT Ava_C0070 98674 - 99357 + | hypothetical protein Ava_C0071 100593 - 99406 - | IS891/IS1136/IS1341 transposase TERM 69 100218 - 100191 - G 79 -10.8 -3.11634 | gap 1 GCCTAGACCATTTAA TTGGCAAAG-GTT GAG AACACTTTGCCAA GTAGACTTGCCCATC Ava_C0072 100789 - 101136 + | hypothetical protein TERM 70 102057 - 102043 - g 77 -6.4 -4.66264 | overlap 102044 CAAAACCTTCAAAAA CTGGCT ACT AGCCAA TAATAGCTATGTAGA Ava_C0073 101213 - 102154 + | DNA-methyltransferase-like TERM 71 102603 - 102590 - f 70 -5.3 -4.49756 | TTCTAAACACCAAAA CTGAA ATTA TTCAG GAAGATACTTGCATT TERM 72 102689 - 102719 + F 76 -4.8 -5.00884 | overlap 102694 AGTATCAATCAATCT TTTAAGTCGTCT TAATAAC AGACGACTTTGA TTTTTTACAACGACT TERM 73 102694 - 102714 + F 79 -6.9 -4.42765 | overlap 102689 CAATCAATCTTTTAA GTCGTCT TAATAAC AGACGAC TTTGATTTTTTACAA Ava_C0074 102778 - 103770 + | hypothetical protein TERM 74 103816 - 103797 - f 73 -6.4 -4.28774 | opp_overlap 103798, overlap 103798 TCATGTAACCGAAAA GGGTGCTA GAAA TAGCACCT GTTAAAACATCATTT TERM 75 103815 - 103798 - f 77 -9.9 -3.16783 | opp_overlap 103798, overlap 103797 CATGTAACCGAAAAG GGTGCTA GAAA TAGCACC TGTTAAAACATCATT TERM 76 103798 - 103815 + F 76 -9.9 -3.03619 | opp_overlap 103797 103798 CATGTAACCGAAAAG GGTGCTA GAAA TAGCACC TGTTAAAACATCATT TERM 77 105098 - 105086 - g 72 -6.3 -4.2535 | AGATGATAGTGAAAA TTCTG AAA CAGAA ATACCATCTTTAGTA Ava_C0075 103851 - 105185 + | DNA polymerase III beta subunit family protein TERM 78 105408 - 105388 - g 78 -9.7 -3.53811 | TTTAGCGGCCCCAAA GGTACAGGT AAA ACCAGTACC GCCCGCATCATCGCT Ava_C0076 105250 - 106539 + | ATPase TERM 79 106547 - 106574 + F 74 -7.8 -3.99693 | opp_overlap 106549 106558, overlap 106545 106549 AAGCTTAACTTTAAG GAGGGTTATAAC TATA GTTATAGCCCTA TATTTCTTTATTTAA TERM 80 106549 - 106572 + F 82 -10.4 -3.5593 | opp_overlap 106549 106558, overlap 106547 106545 GCTTAACTTTAAGGA GGGTTATAAC TATA GTTATAGCCC TATATTTCTTTATTT TERM 81 106762 - 106750 - g 71 -4.9 -4.62163 | opp_overlap 106750 ACATAAAAATACAAA TCAAT GGA ATTGA TTATGATATTGAAGC Ava_C0077 106668 - 106976 + | hypothetical protein TERM 82 107073 - 107046 - g 84 -10.8 -3.68911 | overlap 107044 107039 AAGATAAACTAAACA TTTATTGGAAAG ACCC CTCTCCAATAAA ACCTTGGCAGCCCAA Ava_C0078 106973 - 107770 + | DNA polymerase I-like Ava_C0079 108148 - 107780 - | transposase IS4 Ava_C0080 108573 - 108190 - | transposase TERM 83 109486 - 109469 - g 82 -3.4 -5.48213 | TATCCAAAAGAAAAA CTTGCA ATTACA CGCAAG ATTAAAGAGGGCGAA Ava_C0081 108767 - 109702 + | DNA polymerase I-like TERM 84 110392 - 110380 - g 72 -6.3 -4.24606 | AAGCTATAGTCAAAA TTCTC TCA GAGAA ACAAGCCAGCTTAAA Ava_C0082 109791 - 110498 + | hypothetical protein TERM 85 110618 - 110639 + F 81 -4.5 -5.40072 | opp_overlap 110621, overlap 110621 ATACCAAGCAAGCAG AAAGAGTTA ATAC TAACTCTTC TTTTTTTAACCACCG TERM 86 110621 - 110636 + F 78 -6.2 -4.79949 | opp_overlap 110621, overlap 110618 CCAAGCAAGCAGAAA GAGTTA ATAC TAACTC TTCTTTTTTTAACCA Ava_C0083 110698 - 111657 + | DNA polymerase III subunit delta TERM 87 111813 - 111790 - g 73 -3.8 -4.98531 | opp_overlap 111790 TGGGCAAAGGAAAAA TTGCCTTGGC ATTC GCAAATGCAA TACTCTCAAGAGGAA Ava_C0084 111654 - 112577 + | DNA polymerase III subunit delta' TERM 88 112636 - 112601 - f 100 -9.8 -4.77438 | opp_overlap 112602 112604, overlap 112602 112604 ACTCATTATCAAAAA GCACTGCCAGTTAGAA GTAT TTCTAGCTGGCAGTAT TTGTTTACACATAAA TERM 89 112635 - 112602 - f 95 -13.3 -3.4574 | opp_overlap 112602 112604, overlap 112601 112604 CTCATTATCAAAAAG CACTGCCAGTTAGAA GTAT TTCTAGCTGGCAGTA TTTGTTTACACATAA TERM 90 112602 - 112635 + F 100 -13.3 -4.42806 | opp_overlap 112602 112601 112604, overlap 112604 CTCATTATCAAAAAG CACTGCCAGTTAGAA GTAT TTCTAGCTGGCAGTA TTTGTTTACACATAA TERM 91 112604 - 112633 + F 100 -15.9 -3.81958 | opp_overlap 112602 112601 112604, overlap 112602 CATTATCAAAAAGCA CTGCCAGTTAGAA GTAT TTCTAGCTGGCAG TATTTGTTTACACAT TERM 92 112633 - 112604 - f 100 -13.7 -3.29543 | opp_overlap 112604 112602, overlap 112602 112601 CATTATCAAAAAGCA CTGCCAGTTAGAA GTAT TTCTAGCTGGCAG TATTTGTTTACACAT Ava_C0085 112670 - 113341 + | hypothetical protein Ava_C0086 114193 - 113690 - | transposase (24) Ava_C0087 114621 - 114190 - | transposase family protein Ava_C0088 115262 - 114762 - | putative transposase Ava_C0089 115688 - 115299 - | hypothetical protein Ava_C0090 116083 - 115841 - | histone-like DNA-binding protein Ava_C0091 116616 - 116101 - | peptidoglycan binding domain-containing protein Ava_C0092 117283 - 116672 - | hypothetical protein Ava_C0093 117744 - 117280 - | endoribonuclease L-PSP Ava_C0094 118248 - 117871 - | hypothetical protein TERM 93 118132 - 118116 - G 84 -5.1 -5.39721 | TGAGGAGACAAAAAA TGTAGGA GGT TCCTGCA CTAATGAACAAGCTT Ava_C0095 118557 - 118270 - | hypothetical protein TERM 94 118602 - 118620 + r 81 -8.8 -4.10453 | opp_overlap 118601 118596 118604 GAGCATCAATTCAAG TAGTGGGC ATC GCCCACCA TTTTCAAAACCTTTC TERM 95 118618 - 118604 - R 82 -11.4 -2.79684 | opp_overlap 118602, overlap 118601 118596 GCATCAATTCAAGTA GTGGGC ATC GCCCAC CATTTTCAAAACCTT Ava_C0096 119492 - 118701 - | hypothetical protein Ava_C0097 120032 - 119646 - | hypothetical protein TERM 96 119809 - 119832 + g 91 -11.8 -3.40899 | opp_overlap 119788 119805 TCGTGACGATATCGA TCGTGACGAT ATCG ATCGTCGCGA TTGTACTGAGCGATT Ava_C0098 120904 - 120164 - | abortive infection protein Ava_C0099 121928 - 120969 - | abortive infection protein Ava_C0100 122653 - 121997 - | TetR family transcriptional regulator TERM 97 122702 - 122716 + r 79 -7.2 -4.431 | opp_overlap 122712 CTTTCGTGCCATATT TGTCAT TAA ATGACA TTTTGTCACTAAGTG Ava_C0101 124039 - 123098 - | hypothetical protein TERM 98 123733 - 123723 - G 73 -5.4 -4.58663 | ACCATTTGGTAAAAA TCTG CCA CAGA GCGAGGAGCCAGTGC Ava_C0102 125811 - 124255 - | glucose-methanol-choline oxidoreductase Ava_C0103 126220 - 125885 - | salicylate esterase Ava_C0104 126592 - 126224 - | cupin TERM 99 126917 - 126953 + r 88 -10.4 -3.88577 | overlap 126915 ACTAACGCTTGAGAC GGAGACAGTATTTT ATCTTTTTC AAAATGCTGTCTCC TATTTTACTTGTTGC Ava_C0106 127657 - 126992 - | isochorismatase hydrolase TERM 100 127312 - 127341 + g 71 -5 -4.68384 | gap 1, opp_overlap 127312 127313 ATATCTCGGTCCAAA GC-GCAGCAAGTA TAAGT TGCTTGCGGCCGC TTTTCTTCACTACAT Ava_C0107 128954 - 128094 - | Alpha/beta hydrolase fold TERM 101 129260 - 129287 + r 70 -8.4 -3.34895 | gap 1, opp_overlap 129259 CCTTCTCTACGAGAG GCTGCGC-CAACG GAA CGCTGCGCGTAGC TTGCTTCCCCGTAGG Ava_C0108 131342 - 129423 - | zinc-containing alcohol dehydrogenase superfamily protein TERM 102 130327 - 130341 + g 73 -7.2 -4.11216 | opp_overlap 130327 GTTGGTATGGGAACA GTTTGA ATC TCAAAC TTTTCAGCATCACCA Ava_C0109 132264 - 131509 - | short chain dehydrogenase Ava_C0110 133008 - 132427 - | hypothetical protein Ava_C0111 134356 - 133799 - | DSBA oxidoreductase TERM 103 134483 - 134496 + r 74 -8.1 -3.65046 | AGGCTGTAATTTGAT GGAGC AGCC GCTCC TTCTTAAGATAGAAG Ava_C0112 135325 - 134591 - | NAD-dependent epimerase/dehydratase TERM 104 135196 - 135230 + g 70 -7.8 -3.5936 | overlap 135197 CCTCAACAATCTTTT CGAGCTTTTCGGTGCG TCG TGCACCCAAAAGCACC TTTGCACCGTTTCGA TERM 105 135197 - 135229 + g 81 -11.3 -2.75294 | overlap 135196 CTCAACAATCTTTTC GAGCTTTTCGGTGCG TCG TGCACCCAAAAGCAC CTTTGCACCGTTTCG Ava_C0113 136027 - 135389 - | ketosteroid isomerase-like protein Ava_C0114 136934 - 136053 - | NAD-dependent epimerase/dehydratase TERM 106 137234 - 137212 - g 76 -7.6 -4.1711 | overlap 137213 ATCACCGCCAAGAAA TCGCCACACG GAT CGTGCGGCAT ACCAAATCCAGCGGC TERM 107 137233 - 137213 - g 79 -11.1 -3.09784 | overlap 137212 TCACCGCCAAGAAAT CGCCACACG GAT CGTGCGGCA TACCAAATCCAGCGG Ava_C0115 137160 - 138080 + | AraC family transcriptional regulator Ava_C0116 138905 - 138276 - | two component LuxR family transcriptional regulator Ava_C0117 146003 - 138918 - | serine/threonine protein kinase and signal transduction histidine kinase with GAF and PAS/PAC sensor TERM 108 142427 - 142439 + g 77 -6.3 -4.64657 | TGGTGTTGACGCAGT TTAGC AAA GCTAA TTTTTCAGAGTTTGA TERM 109 145710 - 145727 + g 75 -5.5 -4.83615 | opp_overlap 145709 CGGGCAGAAAATATC TGGACGC TTTT GCATCCA TTTTTCTAGGGACTC TERM 110 146351 - 146402 + r 71 -4.6 -4.82901 | gap 2, opp_overlap 146364 AGAATATTAATTATT GCTTTCCACTCAACCGGCCTGTTT GATAAA AATCAAGCAGGTT-AG-GGAAAGC TTTTTCTAGCAACCA Ava_C0118 147521 - 146346 - | hypothetical protein TERM 111 147728 - 147716 - H 72 -7.7 -3.68798 | overlap 147712 TCCTAAAAGAACTAA TGCTG ACG CAGCA ATAAGAGAAATATAT Ava_C0119 147757 - 148140 + | single-strand binding protein Ava_C0120 148214 - 148633 + | hypothetical protein TERM 112 148649 - 148690 + F 91 -5.9 -5.75945 | AACCAATTAACTGAA TAATGCTAGTCCAGGCAGG TTTA CTGGTTTGAACTAGCGTTA TTTTTTTTCAAAAAT Ava_C0121 148772 - 149566 + | cobyrinic acid a,c-diamide synthase Ava_C0122 149774 - 151057 + | HNH endonuclease Ava_C0123 151142 - 152128 + | ParB family protein Ava_C0124 153008 - 152436 - | hypothetical protein Ava_C0125 154171 - 153011 - | hypothetical protein Ava_C0126 156520 - 154229 - | xanthine dehydrogenase, molybdenum binding subunit apoprotein TERM 113 154400 - 154388 - G 76 -7.7 -4.15044 | GTCCTCCTCAACAAA GATCG TTT CGATC TCCAAGATATCGGCA TERM 114 154759 - 154770 + g 75 -5.8 -4.72986 | opp_overlap 154758 154759, overlap 154753 AGATATTGACGAAAC GCGA CGGG TCGC TTTTTAGTCGCAGTC Ava_C0127 157531 - 156539 - | molybdopterin dehydrogenase, FAD-binding Ava_C0128 158360 - 157518 - | ferredoxin TERM 115 157736 - 157758 + g 80 -6.2 -4.7629 | overlap 157737 157738 157755 TCGTCCGCAAATTGT TAGTGACGTG ACT CACGTCGCCG TTTTTGGCTTCCTGC TERM 116 157738 - 157756 + g 76 -11 -2.66307 | overlap 157737 157736 157755 GTCCGCAAATTGTTA GTGACGTG ACT CACGTCGC CGTTTTTGGCTTCCT TERM 117 158299 - 158317 + g 78 -8.8 -3.76952 | overlap 158316 AGTGTTTTTTCGTCC GCGCTGAG TTG CTCATCGC TTTCGGTTAGATCGA Ava_C0129 158727 - 158476 - | transposase TERM 118 158841 - 158854 + r 90 -3.8 -5.7946 | opp_overlap 158841 TCTCCAAGTGATACA CGGT AAATCC ACCG TTTTTTTGTTAAGCA Ava_C0130 159474 - 158920 - | hypothetical protein TERM 119 159608 - 159640 + r 86 -10.7 -3.77196 | ACTATTGCGTGCTAC GTTTGAGTTGGAG ATTTAGA CCCCAACTCAAAC TTTGATAACTGATAA Ava_C0131 160221 - 159661 - | hypothetical protein Ava_C0132 162948 - 160327 - | ATPase TERM 120 162600 - 162568 - G 72 -7.1 -3.92832 | overlap 162569 AAATTCTTGAAACAA CCCTTTACCAAAG CGATCGT CTTTGGCAAAGGC AAGTATTAAATGTTC TERM 121 162599 - 162569 - G 76 -10.6 -2.94976 | overlap 162568 AATTCTTGAAACAAC CCTTTACCAAAG CGATCGT CTTTGGCAAAGG CAAGTATTAAATGTT Ava_C0133 163310 - 162993 - | hypothetical protein Ava_C0134 164314 - 163307 - | heat shock protein DnaJ-like TERM 122 164409 - 164392 - R 79 -11.3 -2.88544 | opp_overlap 164394, overlap 164394 CCTCACTCTTATACA GACGCGA TTAA TCGCGTC TCCTGGCTTCTGCCC Ava_C0135 165442 - 164399 - | hypothetical protein TERM 123 165738 - 165768 + G 88 -9.8 -4.14392 | overlap 165736 165740 GCTGTAGAGAATTGT TGCCGATTTGGAAA CCT TATCCAAATCGGTG TTTTGCAAGTTGCCA TERM 124 165740 - 165766 + G 100 -12.4 -3.67 | overlap 165736 165738 TGTAGAGAATTGTTG CCGATTTGGAAA CCT TATCCAAATCGG TGTTTTGCAAGTTGC Ava_C0136 165540 - 165860 + | hypothetical protein Ava_C0137 166741 - 165839 - | hypothetical protein Ava_C0138 167769 - 166930 - | aldo/keto reductase TERM 125 166993 - 166973 - G 71 -8.3 -3.53444 | GGACCGGGCGGGAAA GCTTTATCG ATC CGATCAAGC TCGGCTTCGGTCAAC Ava_C0139 168590 - 167919 - | transport-associated protein TERM 126 168405 - 168435 + g 78 -10.3 -3.29144 | CAGTACGCCACGGAC GCGGTGGGCAGCT TCTTC GGCAGCCCAGCGC TTGTAAAAGGAATCG Ava_C0140 169396 - 168623 - | hypothetical protein TERM 127 168969 - 168950 - G 78 -5.6 -4.77036 | opp_overlap 168950 168952, overlap 168952 168954 CGCGACCAGTAAAAA CTCACCTG CTTT CAGGCGTG TTTCGTAAATAGTAG dnaK 171471 - 169582 - | molecular chaperone DnaK TERM 128 171572 - 171595 + r 72 -8.2 -3.53761 | opp_overlap 171566 AGGGCAGAACGGGAA TCCCCATAAA TAAA TTTAGGGGGA TTTAACAACGGCTTC Ava_C0142 172306 - 171716 - | DSBA oxidoreductase TERM 129 171817 - 171801 - G 71 -2.1 -5.14563 | CCGTTGATGAAAAAA GTCGGCG TGC CGTTGAC CCCGCTCTGGATTCC Ava_C0143 172822 - 172352 - | heat shock protein Hsp20 TERM 130 172891 - 172903 + r 73 -9.1 -3.29471 | opp_overlap 172899 CTGGGTTTTGTCAGT CGCTG AAA CAGCG TTGCTATCATGCCAG TERM 131 173265 - 173251 - R 83 -11.4 -3.07962 | CGTGAGACCCCAAGA CCGGAG TGG CTCCGG TTCCCGTCGAGTTGA groEL 175255 - 173618 - | chaperonin GroEL TERM 132 173658 - 173675 + g 71 -8.3 -3.45155 | opp_overlap 173658, overlap 173671 CCAGGGCCGACACCA GCTGGCG CTTT CGCCTGC TTGTCAGGTTTTTCT TERM 133 173671 - 173683 + g 74 -4.8 -4.82901 | opp_overlap 173658, overlap 173658 CAGCTGGCGCTTTCG CCTG CTTGT CAGG TTTTTCTACCACAAC groES 175720 - 175409 - | co-chaperonin GroES TERM 134 176196 - 176154 - H 78 -10 -3.34962 | overlap 176193 GGGCAGAGGGCAGAA GGTTTTGTTTAGAAGGGG ATTCAGA CCCCTCCTAAACAAGAGC CACCCTACGGGTGAA TERM 135 176213 - 176193 - H 74 -7.5 -3.90922 | overlap 176154 176196 ACCCCTCCTAAACAA GAGCCACCC TAC GGGTGAATC CTACGGATACGCTAC TERM 136 176328 - 176380 + H 86 -9.2 -4.24342 | opp_overlap 176334, overlap 176329 ACTCCCTACGGTCGT AGCAGAGGGCAGGAATCAGA TTTCCTTCTGCCT TCTGCCTCCTGCCCTCTGCC TTTCTTGATAAAACC TERM 137 176329 - 176379 + H 90 -12.7 -3.14284 | opp_overlap 176334, overlap 176328 CTCCCTACGGTCGTA GCAGAGGGCAGGAATCAGA TTTCCTTCTGCCT TCTGCCTCCTGCCCTCTGC CTTTCTTGATAAAAC Ava_C0146 176510 - 176959 + | hypothetical protein TERM 138 176995 - 177011 + F 95 -7.9 -5.26316 | GGCATCGAAAAATGG GCGGGGG CTA CTTCCGC TTTTTTGTCAAATAC Ava_C0147 177211 - 177381 + | hypothetical protein Ava_C0148 178535 - 177462 - | flavin oxidoreductase/NADH oxidase Ava_C0149 179228 - 179458 + | metallothionein, family protein TERM 139 179499 - 179477 - T 82 -11.4 -2.85216 | opp_overlap 179476 179475 CACGACCTAGAAGCA CCACTGAATC AAA AATTCAGTGG ATAATTTTAATGCAC TERM 140 179656 - 179640 - T 76 -5.9 -4.63479 | CAGTAGAAATGAAAA CCGATAA ATT TTATCAG GTCACTGTCGGGTTA Ava_C0150 179913 - 179653 - | hypothetical protein Ava_C0151 181675 - 180299 - | glucose-6-phosphate 1-dehydrogenase Ava_C0152 182787 - 181774 - | 6-phosphogluconate dehydrogenase-like protein Ava_C0153 183293 - 182802 - | hypothetical protein Ava_C0154 183590 - 184489 + | hypothetical protein TERM 141 184811 - 184821 + G 82 -8.2 -4.32034 | overlap 184810 AACTATCTCTGACGA CGCG TGG CGCG TTTTAGTAGTAGTCA Ava_C0155 184725 - 184994 + | hypothetical protein TERM 142 185139 - 185176 + F 72 -9.3 -2.6627 | opp_overlap 185167, overlap 185138 185167 TGATATTTGAAGGGT TTAACTGTCCCACTTTT GACT AAAAATGGGACAGTAGA GTTGTCCTAGCTTGA TERM 143 186270 - 186283 + G 70 -8.1 -3.60818 | overlap 186263 GATGGTGAGGATCAT CGGCT GATG AGCCG TTTAGCAGGTTTTAG TERM 144 187791 - 187774 - g 73 -7.1 -4.21343 | CGCAATATAGACAAA TAAAAGC CATC GCTTTTA CAGCTTATGCTGGTG Ava_C0156 185754 - 187916 + | multi-sensor hybrid histidine kinase TERM 145 188195 - 188211 + T 76 -9.5 -3.32562 | overlap 188185 TCGGTGTTTTCGATA TGCTCAT TTA ATGAGCA TTCTGAACACTTTAT TERM 146 188411 - 188384 - T 76 -5 -5.01546 | gap 1, overlap 188386 AAAGTTAGATAAAAA TAGCCCAAAA-TA TAG TATTTTTGGGCGA ATGATTAAAAGATAT TERM 147 188409 - 188386 - T 76 -7.6 -4.11744 | gap 1, overlap 188384 AGTTAGATAAAAATA GCCCAAAA-TA TAG TATTTTTGGGC GAATGATTAAAAGAT Ava_C0159 189754 - 189566 - | hypothetical protein Ava_C0160 189893 - 190123 + | putative transposase Ava_C0161 191278 - 190181 - | glycosyl transferase, group 1 Ava_C0162 192285 - 191902 - | response regulator receiver domain-containing protein Ava_C0163 195016 - 192839 - | multi-component transcriptional regulator TERM 148 193494 - 193530 + g 72 -9.5 -3.07935 | overlap 193504 AGGTCAGTGACGGTT TCCAGGTGAATGCTCCA GTT TGAAGCATTTGCCTGCA TTCGCTCAATCAAGT TERM 149 194075 - 194123 + g 84 -11 -3.60627 | gap 2, overlap 194076 194105 CGCATTCTCCACTTG GGGAGCCAC-CCCTGTAGG-CGGG TTT CCCGACTTGAGGGGAGTGGCTCCA TTTCCCGTCGAGTCC TERM 150 194076 - 194122 + g 100 -14.5 -2.76162 | gap 2, overlap 194075 194105 GCATTCTCCACTTGG GGAGCCAC-CCCTGTAGG-CGGG TTT CCCGACTTGAGGGGAGTGGCTCC ATTTCCCGTCGAGTC TERM 151 194525 - 194515 - G 76 -6.8 -4.56597 | TCCTTCGGTCAAAAA TCCG CCG CGGA TGTCGCAAAAATAGC Ava_C0164 195703 - 195191 - | flavodoxin FldA TERM 152 195355 - 195375 + g 73 -2.6 -5.21709 | GCCAATAGCCAACTG TTTCAGCA CCATT TTCTGAAA TTTTTTCCTCTAGAA TERM 153 195439 - 195427 - G 73 -9.1 -3.44622 | TATCTGGATAACCAA CCTGG TCT CCAGG ACCAAAATAAGCAAC Ava_C0165 197402 - 196233 - | zinc-containing alcohol dehydrogenase superfamily protein Ava_C0166 197824 - 197486 - | threonine dehydrogenase and related Zn-dependent dehydrogenase-like TERM 154 197540 - 197557 + g 88 -9.9 -4.11692 | overlap 197539 197543 TTGGTTGAACAGCTC GAAGCCA TGCT TGGCTTC TTTTAGGGGTAAGTG Ava_C0167 198376 - 197867 - | cyclase/dehydrase Ava_C0168 198650 - 198892 + | putative transposase Ava_C0169 199524 - 199907 + | transposase Ava_C0170 200222 - 199872 - | putative transposase Ava_C0171 201014 - 200241 - | hypothetical protein TERM 155 201023 - 201047 + H 71 -5 -4.61482 | overlap 201021 CCAGCATTATTATGA CGGTCTTG AGCAAATTA CGAGACCG TTCTTTTTTACCACG Ava_C0172 201228 - 201668 + | transposase IS4 Ava_C0174 203410 - 202385 - | phosphoenolpyruvate synthase Ava_C0173 201721 - 202452 + | hypothetical protein Ava_C0175 203939 - 204280 + | hypothetical protein TERM 156 204305 - 204333 + F 76 -4.6 -5.1101 | overlap 204309 ATCTGAGTTTTACAG AAAATCTCGCTC ATACG GAGTGGGATTTA TTTTTTGACTAATGC TERM 157 204309 - 204329 + F 78 -5.4 -5.0666 | overlap 204305 GAGTTTTACAGAAAA TCTCGCTC ATACG GAGTGGGA TTTATTTTTTGACTA Ava_C0176 204389 - 204832 + | hypothetical protein TERM 158 204842 - 204891 + T 76 -2.2 -5.54894 | opp_overlap 204856 TACTAAAATCTCAAA GAATCAGTTAGAAAGTACTGTT TTATGC AGCACTTCACTCTAGCTGATTC TTTTTTTACTACATT Ava_C0177 206169 - 204925 - | hypothetical protein TERM 159 206105 - 206052 - G 91 -10.5 -4.13767 | gap 1, opp_overlap 206058 206063, overlap 206058 206061 TTTCTGAGTCTAAAA GTAAAACAACAGGCTTTCCTTCTGGA TAC TCCTGAACGATAGCCT-TGGTTTTAC TCGCACCCATATCAA TERM 160 206097 - 206061 - G 74 -6.5 -4.43392 | opp_overlap 206058 206063, overlap 206058 206052 CTAAAAGTAAAACAA CAGGCTTTCCTTCTGGA TAC TCCTGAACGATAGCCTT GGTTTTACTCGCACC TERM 161 206063 - 206095 + g 75 -9.1 -3.71672 | opp_overlap 206061 206058 206052, overlap 206058 AAAAGTAAAACAACA GGCTTTCCTTCTGGA TAC TCCTGAACGATAGCC TTGGTTTTACTCGCA Ava_C0178 206979 - 206395 - | hypothetical protein TERM 162 207539 - 207529 - H 72 -4 -5.02287 | overlap 207522 TACAAAAATACAAAA TTGT AGT ACAA ATCTAATCTAATTAA TERM 163 207647 - 207664 + H 76 -3.5 -5.28176 | CACGATCGCACACTT GATTATT GACT GATAATC TTTTTTATAACTACA Ava_C0179 207865 - 208449 + | hypothetical protein TERM 164 208504 - 208479 - f 100 -13.5 -3.84915 | opp_overlap 208483 TATACTAATCAATAA CGAAGTATTCA AATT TGAATACTTCG ATACAAGTGCTGATA Ava_C0180 208746 - 210200 + | hypothetical protein Ava_C0181 210717 - 210463 - | hypothetical protein Ava_C0182 211061 - 210723 - | hypothetical protein TERM 165 211436 - 211416 - H 71 -6.9 -3.96148 | opp_overlap 211417, overlap 211419 TTTTGGGATCAGAAA CTACAGATA TTG TATCTGTGG GGAAGGGAAGCTCAC Ava_C0183 211805 - 212482 + | hypothetical protein Ava_C0184 212654 - 213010 + | hypothetical protein TERM 166 214964 - 214952 - g 70 -5.5 -4.44448 | ACGAGTGGAAAGAAA TCGCC ATT GGCAA GACGTTAACGTTTGA TERM 167 215160 - 215194 + G 100 -12.3 -3.53444 | gap 1, opp_overlap 215186 TCAACCTCTCGCTGG TGCGATCGC-TGTCTC GGAC GAAACAAGCGATCGCA TTTACAACCGCCTCA TERM 168 215913 - 215925 + G 70 -7.7 -3.5764 | opp_overlap 215912 215909 GTACCGTGAAATGAT TGCTG AGG CAGCA TTTCAAAATCAAATT TERM 169 217474 - 217495 + G 73 -7.3 -4.23674 | CAAGAAACTTTAGTT CGTGCATTT GATA AAAAGCACG TTTATATTGCTAAAA TERM 170 218519 - 218509 - g 75 -5.4 -4.77438 | AGTGAGTACCAAAAA GCTT TAC AAGC ACTTCCTAACCGTCC TERM 171 220607 - 220588 - g 73 -10 -2.91695 | overlap 220585 TTTATCGGTAAATCA GCTGCACC CCCT GGTACAGC TTCAAGCACACGAAA Ava_C0185 213811 - 221556 + | hypothetical protein TERM 172 221682 - 221666 - gf 74 -5.2 -4.74132 | ATACCTGATGAAAAA TTTGCA GAATA TGCAAA AAATCCTCCAACTGC TERM 173 222039 - 222029 - g 70 -5.4 -4.50241 | opp_overlap 222029, overlap 222019 222023 AAATATGAACCAAAA CTTG CCT CAAG ATTTAGACAGAGAAA Ava_C0186 221564 - 222073 + | hypothetical protein TERM 174 222304 - 222288 - gf 70 -3.6 -4.89063 | CCACCGAAAAAGAAA CCAGGT GGGCA ACCAGG ACATCAAGGTAAAAC TERM 175 222439 - 222426 - gf 71 -2.3 -5.09245 | overlap 222428 GTAAAAGTAGAAAAA CACGC GGTA GCGCA ACTAGTAGAATGTCC Ava_C0187 222018 - 223490 + | transposase IS66 TERM 176 223970 - 223928 - f 70 -6.4 -4.04319 | CGAGAAAGCTATAAA CCCCAAAACTAGCTTG TTATTAAAACT CAAGGGAGTTTTGGGG CAAATAACAACCGCA TERM 177 224664 - 224651 - g 70 -3.8 -4.74706 | TTCAAGAGTTAAAAA TGGC GAGATT GCCA CTGACTCCATCTTTG Ava_C0189 224323 - 224958 + | hypothetical protein TERM 178 225194 - 225181 - g 71 -6.7 -4.21737 | ATCAAAACAATCAAA CTCTG GAAT CAGAG ATGAAAATATCCCAG Ava_C0190 224948 - 225352 + | hypothetical protein Ava_C0191 225908 - 225492 - | hypothetical protein Ava_C0192 227477 - 225999 - | ATPase TERM 179 226482 - 226514 + g 95 -12.9 -3.17688 | opp_overlap 226481 226484 AGTGGTATCCAAAGC CATACGTTCACATTG GGC TAGTGTGAGCGTATG TTCATGCAGTCGTTC Ava_C0193 230194 - 227477 - | integrase catalytic subunit TERM 180 227992 - 228004 + g 70 -7.7 -3.68265 | TGACTTTTATTCCCT GTCCA GGC TGGAC TTTAGCGTTGCCTTT TERM 181 230559 - 230528 - H 70 -8.9 -3.02591 | gap 1 ATGATTCAAAGGACA GTCGGGTTA-ATAG GTAAT CTACCTAACCCGAC CAAACATAGCATTCC Ava_C0194 230888 - 231676 + | two component LuxR family transcriptional regulator Ava_C0195 232301 - 231681 - | hypothetical protein Ava_C0196 233163 - 232357 - | hypothetical protein TERM 182 232992 - 233007 + g 75 -3.3 -5.19275 | opp_overlap 232992, overlap 232987 TAGACAATCCCAAAT GGTTT ATTTCA AAACC TTTTGTTTTATACAT Ava_C0197 234094 - 233186 - | hypothetical protein Ava_C0198 234415 - 235356 + | hypothetical protein Ava_C0199 235707 - 235426 - | hypothetical protein Ava_C0200 238032 - 235831 - | hypothetical protein TERM 183 236505 - 236463 - G 93 -13.6 -2.71681 | CAAGTTGTTCAACTA CCT-CTGCTGACTCCAGCCC TTGGG GGGCTGTAG-CAGCAGGAGG TAAACACTTACAAAA TERM 184 237891 - 237875 - G 86 -10.1 -4.00042 | CCTTCTACTAAAGAA GGGGCAA CTA TCGCCCC AAATGGATGCCAAAA Ava_C0201 239774 - 238590 - | hypothetical protein TERM 185 239331 - 239356 + g 95 -11.3 -3.90112 | opp_overlap 239335 239352 GTTACTTTCATCTAT CGAAGTGTTCA AATT TGAATACTTCG TTTCATTCAAACGAC TERM 186 239368 - 239387 + g 70 -7.1 -3.8535 | opp_overlap 239352 239368 239371, overlap 239366 239371 TTCGTTTCATTCAAA CGACGGG CACTTT CCCGTTG TCTTTCTTTCGCTTG TERM 187 240164 - 240200 + H 89 -12.3 -3.33922 | opp_overlap 240173, overlap 240164 240167 AAGTGGGCTTGTTTT CTCCTCAAAGCCCTGTT TGC ACCAGGGCTTTGGGTGG GTTTTTAGAAAAAAT TERM 188 240164 - 240201 + H 100 -12.1 -4.57073 | gap 1, opp_overlap 240173, overlap 240164 240167 AAGTGGGCTTGTTTT CTC-CTCAAAGCCCTGTT TGC ACCAGGGCTTTGGGTGGG TTTTTAGAAAAAATG TERM 189 240167 - 240197 + H 100 -14.8 -2.83903 | opp_overlap 240173, overlap 240164 240164 TGGGCTTGTTTTCTC CTCAAAGCCCTGTT TGC ACCAGGGCTTTGGG TGGGTTTTTAGAAAA TERM 190 240191 - 240173 - H 75 -8.8 -3.53012 | opp_overlap 240167 240164 240164 TGTTTTCTCCTCAAA GCCCTGTT TGC ACCAGGGC TTTGGGTGGGTTTTT TERM 191 240494 - 240475 - g 80 -2.9 -5.49809 | gap 1, opp_overlap 240475 CAAAGTGGAAAAAAA GATGG-AC ATCAA GTACCATC TTGTCAGAAACCCAA Ava_C0202 240291 - 240743 + | hypothetical protein Ava_C0203 241341 - 240835 - | hypothetical protein TERM 192 241385 - 241429 + r 79 -7.2 -4.45083 | gap 2, overlap 241386 GGCGGCGTTATAGCG ACTTACCACCCAGTAGCGGGGG AAA CCCCCG-TACTGAGTGA-AAGA TTTTATACGTATCCC TERM 193 241386 - 241428 + r 79 -10.7 -3.26568 | gap 2, overlap 241385 GCGGCGTTATAGCGA CTTACCACCCAGTAGCGGGGG AAA CCCCCG-TACTGAGTGA-AAG ATTTTATACGTATCC Ava_C0204 242886 - 241621 - | hypothetical protein TERM 194 242814 - 242792 - G 71 -3.4 -5.04325 | overlap 242793 CCCAAACCAGAAAAA GTTGCTATAG TGC CTAAAGCAAT AGCAGTCAAAGACAC Ava_C0205 243637 - 243158 - | hypothetical protein Ava_C0206 244123 - 243659 - | hypothetical protein Ava_C0207 246290 - 244113 - | cell divisionFtsK/SpoIIIE TERM 195 245021 - 245006 - G 73 -9 -3.43564 | CAACTGAAGCTACAA GATGGG GAAG CCCATC AAATTTACCAAAGGT Ava_C0208 246328 - 247473 + | hypothetical protein Ava_C0209 248288 - 247464 - | hypothetical protein Ava_C0210 248965 - 248315 - | peptidase M23B Ava_C0211 249311 - 248970 - | hypothetical protein TERM 196 249268 - 249237 - G 95 -9.6 -4.42653 | overlap 249238 ACGCCAGTTATAAAA CTGCAAATATCCTG GTTG CAAGATATCTGCAA TCCACACCAGCAGTA TERM 197 249267 - 249238 - G 81 -10.9 -3.2511 | overlap 249237 CGCCAGTTATAAAAC TGCAAATATCCTG GTTG CAAGATATCTGCA ATCCACACCAGCAGT Ava_C0212 249799 - 249311 - | hypothetical protein Ava_C0213 250388 - 249822 - | hypothetical protein Ava_C0214 251235 - 250393 - | hypothetical protein TERM 198 251170 - 251182 + g 71 -4.1 -4.79752 | ACAAACCGTCCACAG GGTGA CAT TTACC TTTTGTCTTCTTCGA Ava_C0215 251464 - 251246 - | hypothetical protein Ava_C0216 251715 - 251467 - | hypothetical protein Ava_C0217 252275 - 251724 - | hypothetical protein Ava_C0218 252651 - 252298 - | hypothetical protein TERM 199 252431 - 252444 + g 70 -3.9 -4.87665 | AAAAAGTTATAAAGG GTTAA GCCA TTAAC TTTTTGTAAATAAGC TERM 200 252580 - 252591 + g 75 -7.2 -4.34402 | ATCAAAATATCCTCC CCGC TTTC GCGG TTTTACTATACCGGC TERM 201 253974 - 253956 - g 71 -4.5 -4.59846 | ACCATACAAAAAGAA CTGGGTA GCCTT TCCCCAG TGGTAGAGAAGAATT Ava_C0219 252687 - 255209 + | helicase-like Ava_C0220 255820 - 255206 - | hypothetical protein Ava_C0221 256490 - 255954 - | hypothetical protein TERM 202 256193 - 256210 + g 74 -4.1 -4.91459 | GAAGTAATCTATCTC TTGCAGT TTTT ACCGCAA TTTTTGTAGCTGTTC TERM 203 256414 - 256440 + g 75 -5.2 -4.78572 | opp_overlap 256416 256419, overlap 256416 256419 AACCATTTTTCATCA AACAATAAATCC ATT GGATTTACTGTA TTTTCTTGATTAAAA TERM 204 256438 - 256416 - G 80 -10 -3.73224 | opp_overlap 256414 256416 256419, overlap 256419 CCATTTTTCATCAAA CAATAAATCC ATT GGATTTACTG TATTTTCTTGATTAA TERM 205 256416 - 256438 + g 74 -7.8 -4.00694 | opp_overlap 256416 256419, overlap 256414 256419 CCATTTTTCATCAAA CAATAAATCC ATT GGATTTACTG TATTTTCTTGATTAA TERM 206 256435 - 256419 - G 74 -8.1 -4.00042 | opp_overlap 256416 256414 256419, overlap 256416 TTTTTCATCAAACAA TAAATCC ATT GGATTTA CTGTATTTTCTTGAT Ava_C0222 257063 - 256509 - | hypothetical protein TERM 207 257975 - 257996 + G 73 -3.7 -4.99134 | gap 1, overlap 257981 TTACGGTGGATTAAT CACTACGCTG ATG CGGC-TGGTG TTTTTGCTTTACGCT Ava_C0223 257154 - 261182 + | hypothetical protein TERM 208 261646 - 261664 + G 71 -8.2 -3.54543 | TAAACAACTGCTCCG TGCTGAAG GAT TTTCAGCA TTTGAACGAGTGGGT Ava_C0224 261179 - 262237 + | ATPase Ava_C0225 262296 - 263162 + | hypothetical protein TERM 209 263533 - 263551 + G 73 -5.3 -4.63527 | gap 1, opp_overlap 263525 AAAGCAACCCGACAG TGC-CTCC GCCC GGAGAGCA TTTTTCCCCTCATCA TERM 210 264182 - 264167 - g 86 -7.6 -4.63527 | GTAGTACCTGAAAAA GTTCCA GGCG TGGAAC TGGGAATGGAAGCAC TERM 211 264822 - 264806 - g 71 -2.1 -5.1104 | opp_overlap 264809, overlap 264807 264809 AAAGATACACAAAAA TTAGGCC CCT GGCCTTT TGAAATTGGACTATG TERM 212 264809 - 264819 + G 79 -8.2 -4.19506 | opp_overlap 264809 264807 264806 GATACACAAAAATTA GGCC CCT GGCC TTTTGAAATTGGACT TERM 213 264907 - 264878 - g 85 -4.1 -5.44119 | overlap 264886 CGTATGGGAAAAAAA GGCGACAACGATG AATA CACCGCCCGCGCC CGTACTATTGCCTTT Ava_C0226 263282 - 266677 + | helicase-like Ava_C0227 266674 - 268530 + | hypothetical protein Ava_C0228 268527 - 269330 + | phospholipase D/transphosphatidylase Ava_C0229 270011 - 269784 - | XRE family transcriptional regulator TERM 214 271198 - 271187 - g 82 -5.8 -5.04385 | CATATGCCCAAAAAA TGGC CCAA GCCA AGGAAGAAGTAGCTA Ava_C0230 270157 - 271707 + | hypothetical protein Ava_C0231 271841 - 272428 + | hypothetical protein Ava_C0232 272499 - 273746 + | C-5 cytosine-specific DNA methylase TERM 215 273800 - 273821 + T 78 -5.9 -4.86731 | CTTATATTCTTTGAA GGCTTTTAA ATAA TTAAATGCC TTTTCTTTAAAAACC TERM 216 274095 - 274080 - T 72 -7.6 -3.77906 | opp_overlap 274080 AACTGAAATATACAA GGCTAA AGTA TTAGCC TAATTGCATAGGGCT Ava_C0233 277003 - 274301 - | Type III restriction enzyme, res subunit TERM 217 274598 - 274584 - G 71 -10 -2.62184 | overlap 274586 GCTTGCCGTACATTA GACTGG ATA CCAGTC ACGCGGTCAATAATC TERM 218 275527 - 275557 + g 74 -7.6 -4.04318 | opp_overlap 275504 275527 275528 275531, overlap 275528 CGCCATATTGAGCAA CCAACGCAGACATT AGT AATGATTGCGTTGC TTTATACTCTGTGAA TERM 219 275528 - 275556 + g 79 -11.1 -3.02109 | opp_overlap 275504 275528 275527 275531, overlap 275527 GCCATATTGAGCAAC CAACGCAGACATT AGT AATGATTGCGTTG CTTTATACTCTGTGA Ava_C0234 282584 - 277023 - | hypothetical protein TERM 220 277261 - 277241 - G 71 -4.7 -4.58663 | opp_overlap 277232 277243, overlap 277243 AGCAGTGGTGAAAAA TTGGTTCAC CTT GTAAACCTA ATCTCTCAAATTCCC TERM 221 280099 - 280109 + g 78 -4 -5.15117 | TCTTGGCGAACCGAT TCTA ATA TAGA TTTTTTAACATTTTC TERM 222 281693 - 281707 + g 75 -7.2 -4.35483 | opp_overlap 281692 281693 281695 TTACTTGGCAATAAT TAGATG GTT CATCTA TTTCTTCTAATAAAA TERM 223 281812 - 281824 + g 71 -3.4 -5.055 | GATAGCATAGATAGT GTAG CATAA CTAC TTTTTTCGGACTTAA Ava_C0235 285070 - 282584 - | hypothetical protein Ava_C0236 289209 - 285538 - | helicase-like TERM 224 288990 - 288979 - G 70 -3.6 -4.8543 | TAAGCCGGATAAAAA CCCC TTTT GGAG AAAGAACACACTCCA Ava_C0237 292244 - 289206 - | hypothetical protein TERM 225 291078 - 291101 + g 79 -3.4 -5.28942 | gap 1, opp_overlap 291078 291081 291087, overlap 291081 AGCAAATATAAAATA GTA-TAAAAAT ATT ATTTTTAATAC TTTTTCTTTGAAATA TERM 226 291100 - 291087 - G 70 -2.5 -5.02201 | opp_overlap 291081 291078, overlap 291081 291078 AAAATAGTATAAAAA TATTA TTTT TAATA CTTTTTCTTTGAAAT Ava_C0238 293184 - 292690 - | hypothetical protein TERM 227 293809 - 293793 - g 75 -2.3 -5.27938 | ACGCGGAAAGAAAAA TACTTAT GGA ATTAGTA AAAATACTGCGGCTA Ava_C0239 293464 - 294546 + | Phage integrase Ava_C0240 294779 - 294979 + | hypothetical protein TERM 228 295539 - 295528 - g 71 -2.2 -5.2189 | GTAATCAGCAAAAAA GTCA AAAA CGAC AAATGAATACTCAAA Ava_C0241 295233 - 295775 + | hypothetical protein Ava_C0242 296802 - 295894 - | hypothetical protein Ava_C0243 298652 - 296808 - | integrase catalytic subunit TERM 229 298683 - 298699 + H 70 -6.5 -4.14764 | TCACAAACGTGCAAC TTCCGCT TAA AGCGGCA TTTAATTATTTAAGC TERM 230 298807 - 298786 - H 73 -5.9 -4.52857 | AGTTTTTAGAGAAAA GGCATTTAA TTAT TTAAAAGCC TTCAAAGAATATAAA Ava_C0244 298966 - 299259 + | hypothetical protein Ava_C0245 299464 - 299631 + | hypothetical protein Ava_C0246 299659 - 300222 + | hypothetical protein Ava_C0247 300219 - 300758 + | hypothetical protein SEQUENCE gi|75906225|ref|NC_007413.1| Anabaena variabilis ATCC 29413, complete genome (length 6365727) TERM 1 221 - 210 - g 70 -5.8 -4.27192 | AAACTTGGATTAAAA CTGC TAAT GCAG AACGCTTAGAAAATA dnaA 119 - 1501 + | chromosomal replication initiation protein Ava_0002 1919 - 3082 + | DNA polymerase III subunit beta Ava_0003 4118 - 3177 - | binding-protein dependent transport system inner membrane protein Ava_0004 5084 - 4122 - | binding-protein dependent transport system inner membrane protein TERM 2 5327 - 5292 - R 82 -7.6 -4.41348 | opp_overlap 5294 5295, overlap 5293 5295 GTTGCGCCAAATAAA TGATGTAGAGACGTTG CATG CAACGTCTCTACAGTT TCAGGGGAGAGGTAC TERM 3 5326 - 5293 - R 80 -11.1 -3.24488 | opp_overlap 5294 5295, overlap 5292 5295 TTGCGCCAAATAAAT GATGTAGAGACGTTG CATG CAACGTCTCTACAGT TTCAGGGGAGAGGTA TERM 4 5294 - 5325 + r 100 -14.6 -3.53091 | opp_overlap 5293 5292 5295, overlap 5295 TGCGCCAAATAAATG ATGTAGAGACGTTG CATG CAACGTCTCTACAG TTTCAGGGGAGAGGT TERM 5 5295 - 5324 + r 100 -18.1 -2.71712 | opp_overlap 5295 5293 5292, overlap 5294 GCGCCAAATAAATGA TGTAGAGACGTTG CATG CAACGTCTCTACA GTTTCAGGGGAGAGG TERM 6 5324 - 5295 - R 100 -18.1 -3.18452 | opp_overlap 5294 5295, overlap 5293 5292 GCGCCAAATAAATGA TGTAGAGACGTTG CATG CAACGTCTCTACA GTTTCAGGGGAGAGG TERM 7 5363 - 5353 - R 70 -8.2 -3.41602 | GGTACTCTACGAGAA GCGC TCC GCGC TATAGAGAGGGGTTT Ava_0005 6238 - 5435 - | methyltransferase Ava_0006 6463 - 6915 + | hypothetical protein Ava_0007 6923 - 7354 + | NUDIX hydrolase Ava_0008 7568 - 7861 + | hypothetical protein TERM 8 8064 - 8031 - T 76 -9.7 -2.98823 | opp_overlap 8036, overlap 8036 CTTCCTGTAGATAGA GAAAAGCACCGTGAA ATAT CTCACAGTGCTTTTT TATTTTTGAATCCTT TERM 9 8059 - 8036 - T 91 -9.6 -4.64844 | opp_overlap 8036, overlap 8031 TGTAGATAGAGAAAA GCACCGTGAA ATAT CTCACAGTGC TTTTTTATTTTTGAA TERM 10 8036 - 8059 + T 93 -6.7 -5.93252 | opp_overlap 8036 8031 TGTAGATAGAGAAAA GCACCGTGA AATATC TCACAGTGC TTTTTTATTTTTGAA Ava_0009 8645 - 8217 - | hypothetical protein Ava_0010 8850 - 9500 + | PadR family transcriptional regulator Ava_0011 9853 - 10281 + | hypothetical protein TERM 11 10320 - 10370 + T 75 -9.8 -2.90194 | opp_overlap 10313 10310 10322 10355, overlap 10322 TAAGACAATTTTACA GACGCGATTAATCGCGGCTATA ACAACTG TACAGACGAGATCAATCGCGTC TCTAATTACAAAACT TERM 12 10368 - 10322 - T 79 -11 -2.92921 | opp_overlap 10322 10320, overlap 10313 10310 10355 AGACAATTTTACAGA CGCGATTAATCGCGGCTATA ACAACTG TACAGACGAGATCAATCGCG TCTCTAATTACAAAA Ava_0012 11389 - 10376 - | Serine/threonine protein kinase Ava_0013 12634 - 11732 - | Alpha/beta hydrolase fold Ava_0014 12845 - 13366 + | hypothetical protein TERM 13 13463 - 13480 + F 77 -2.8 -5.51353 | GAGTGCATAAGTTTT TTGTAT TTTCAT ATACAA TTTTTGTTATTTTTA TERM 14 13551 - 13572 + F 73 -9.5 -2.83164 | opp_overlap 13551, overlap 13539 TCATGGGTAATGAAA TTCCTCATC TGTG GGTGAGGAA TCTGGTAATAGGTAA TERM 15 13572 - 13551 - f 71 -7.3 -3.91084 | opp_overlap 13539 13551 TCATGGGTAATGAAA TTCCTCATC TGTG GGTGAGGAA TCTGGTAATAGGTAA Ava_0015 13677 - 13877 + | hypothetical protein TERM 16 14248 - 14231 - g 74 -7 -4.40333 | opp_overlap 14230, overlap 14232 GCCAAAGAACATAAA GCCGAT GCCATT ATCGGC ATTGGTGGGGGTAAA Ava_0016 13928 - 15118 + | Iron-containing alcohol dehydrogenase Ava_0017 15115 - 16326 + | aspartate aminotransferase Ava_0018 16356 - 16682 + | ArsR family transcriptional regulator TERM 17 16787 - 16729 - T 100 -19.1 -2.81509 | gap 2, opp_overlap 16727 16726 16732, overlap 16726 GAAAATATCTAAGTA TCAGTAGGGTGGGCAATGCCCACCGTATC ATA GTTTTGGTGGGCATTGCCCACCCTACT-- TATATTTCAGAAATC TERM 18 16732 - 16786 + T 100 -32.4 -3.81755 | opp_overlap 16726 16729, overlap 16727 16726 AATATCTAAGTATCA GTAGGGTGGGCAATGCCCACCGTATC ATA GTTTTGGTGGGCATTGCCCACCCTAC TTATATTTCAGAAAT Ava_0019 17357 - 17049 - | hypothetical protein TERM 19 17366 - 17378 + H 76 -4.8 -4.93547 | TTAGCATAGTTTCAA TCCC GTAAG GGGA TTTTTAATTGGTTAA TERM 20 17443 - 17455 + H 72 -7.7 -3.71124 | TTTTGGGAGTTTTTT TCCCT AAT AGGGA TTGTATCTTGATACT Ava_0020 17810 - 18580 + | TPR repeat-containing protein Ava_0021 18581 - 19231 + | TenA family transcription regulator Ava_0022 20486 - 19248 - | glycosyl transferase family protein TERM 21 19644 - 19675 + g 78 -9.7 -3.55444 | opp_overlap 19643 19647 19651, overlap 19647 CAAACCAAAACGGAT GAATTTATCAAAG GGAAAG CTTTGATGAATTC TTTGCAGCCTGCCGG Ava_0023 20934 - 22625 + | dihydroxy-acid dehydratase TERM 22 22805 - 22819 + T 70 -8.5 -3.30124 | opp_overlap 22797 22790, overlap 22804 GAAGCCACTGCGTTG CGCGG ATTCC CCGCG TTGTAGCAAGTGGCG Ava_0024 24203 - 23031 - | periplasmic sensor Signal transduction histidine kinase TERM 23 23907 - 23919 + g 75 -3.3 -5.13722 | opp_overlap 23908, overlap 23908 TTTTAATTGAAATAA AGCTG ATT CAGCA TTTTCTTTTGCTGCG TERM 24 23918 - 23908 - G 76 -6.8 -4.50159 | opp_overlap 23907 23908 TTTAATTGAAATAAA GCTG ATT CAGC ATTTTCTTTTGCTGC TERM 25 24263 - 24251 - H 79 -4.9 -5.14985 | TGAAAGACAGAAAAA TTGAA GAA TTCAA CATAGTATTATTAAA Ava_0025 24781 - 25518 + | hypothetical protein TERM 26 25512 - 25498 - T 72 -3.6 -4.99043 | CTTCCAGAAATAAAA TTAACT CCC AGTCAA AATTAAAAAATCAGA Ava_0026 26658 - 25498 - | FAD dependent oxidoreductase TERM 27 25737 - 25721 - G 76 -9.5 -3.53761 | CAATTTCCTGGTAAA TTACCCA AGA TGGGTAA AATATGACTAATACT TERM 28 26693 - 26717 + r 82 -11.5 -2.84 | opp_overlap 26693, overlap 26690 26716 TGACTTACAAAAAAA GCAGATCAGTG AAT CACTAATCTGC TAATTATGGGATGAT TERM 29 26717 - 26693 - R 100 -13.7 -5.64274 | opp_overlap 26693 26690 26716 TGACTTACAAAAAAA GCAGATCAGTG AAT CACTAATCTGC TAATTATGGGATGAT Ava_0027 27077 - 26778 - | RNA-binding region RNP-1 Ava_0028 27447 - 27274 - | hypothetical protein Ava_0029 27873 - 27463 - | hypothetical protein TERM 30 28072 - 28058 - H 80 -10 -3.48657 | overlap 28050 28048 28056 TTAAAGATGGAAATA GCTGGA ATT TCCAGC AGCATTCTTCTAACA TERM 31 28221 - 28234 + H 78 -5.3 -4.96028 | CTCAATTTAACTGTT TAGCT TCAC AGCTA TTCTTTTTTTTGAAA TERM 32 30242 - 30214 - g 86 -6.6 -5.00616 | overlap 30215 TCCTGCGGCAAAAAA CTGTCGGCCCAG ACCAA CTAGGCCGCCAT CCGGAAACCGGCGAA TERM 33 30241 - 30215 - g 80 -10.1 -3.60048 | overlap 30214 CCTGCGGCAAAAAAC TGTCGGCCCAG ACCAA CTAGGCCGCCA TCCGGAAACCGGCGA TERM 34 30364 - 30354 - g 73 -8.2 -3.64703 | GCTTCTCTACCCAAA GGGG TTA CCCC AGAAAACATCTCCTT Ava_0030 28254 - 30899 + | DNA topoisomerase I TERM 35 30965 - 30922 - f 70 -9 -3.06261 | overlap 30927 GGTCAAGGGTCAAGA GTCAATAGTCAACAGTCCAA GATT TTCGACTATGGACTATGGAC TAGTGACCAATGACC Ava_0031 31205 - 31342 + | hypothetical protein Ava_0032 31362 - 31811 + | 3-dehydroquinate dehydratase Ava_0033 31992 - 32927 + | hypothetical protein TERM 36 32990 - 33041 + F 84 -7.5 -4.57569 | gap 1, opp_overlap 33003 CTTGAGTCAGGGCTG TCCATAGTCAAGAGTCCAGAGTTA AAGGC TAGCT-TGGACTGTGGACTTTGGA TTTTTGACAACCTGA Ava_0034 33198 - 35723 + | metal dependent phosphohydrolase Ava_0035 36249 - 35758 - | hypothetical protein TERM 37 36156 - 36146 - G 71 -4.6 -4.67048 | opp_overlap 36146 36153 TTAGGCGAAAATAAA GCAC CTG GCGC TGATTGTGCTTGTGC TERM 38 37367 - 37391 + G 85 -2.2 -5.86609 | CAGATACAATGAGCG TGGGAGAATT AATGC AGTTTTTCCA TTTTTATTTTTTTGG Ava_0036 36622 - 38565 + | UDP-galactopyranose mutase TERM 39 38609 - 38569 - T 100 -13.5 -4.70659 | opp_overlap 38570 38570 38572 38578, overlap 38570 38572 38574 TTGCAGATTTAAAAA TTAGAGATACCCGACTTTT TCA AAAAGTCGGGTATCTGCAT CTTTTGTAGTGCGCC TERM 40 38570 - 38608 + T 100 -14.8 -3.84183 | opp_overlap 38569 38570 38572 38574, overlap 38570 38572 38578 TGCAGATTTAAAAAT TAGAGATACCCGACTTTT TCA AAAAGTCGGGTATCTGCA TCTTTTGTAGTGCGC TERM 41 38608 - 38570 - T 100 -17 -3.41913 | opp_overlap 38570 38570 38572 38578, overlap 38569 38572 38574 TGCAGATTTAAAAAT TAGAGATACCCGACTTTT TCA AAAAGTCGGGTATCTGCA TCTTTTGTAGTGCGC TERM 42 38570 - 38610 + T 90 -8.6 -4.4648 | gap 2, opp_overlap 38569 38570 38572 38574, overlap 38570 38572 38578 TGCAGATTTAAAAAT TA-G-AGATACCCGACTTTT TCA AAAAGTCGGGTATCTGCATC TTTTGTAGTGCGCCT TERM 43 38606 - 38572 - T 100 -17.4 -3.27476 | opp_overlap 38572 38570 38570 38578, overlap 38570 38569 38574 CAGATTTAAAAATTA GAGATACCCGACTTTT TCA AAAAGTCGGGTATCTG CATCTTTTGTAGTGC TERM 44 38572 - 38607 + T 100 -17.2 -2.90028 | gap 1, opp_overlap 38570 38569 38572 38574, overlap 38570 38570 38578 CAGATTTAAAAATTA G-AGATACCCGACTTTT TCA AAAAGTCGGGTATCTGC ATCTTTTGTAGTGCG TERM 45 38604 - 38574 - T 100 -20 -3.19102 | opp_overlap 38572 38570 38570 38578, overlap 38572 38570 38569 GATTTAAAAATTAGA GATACCCGACTTTT TCA AAAAGTCGGGTATC TGCATCTTTTGTAGT TERM 46 38578 - 38600 + T 100 -15 -2.97709 | opp_overlap 38574 38572 38570 38569, overlap 38572 38570 38570 TAAAAATTAGAGATA CCCGACTTTT TCA AAAAGTCGGG TATCTGCATCTTTTG TERM 47 38611 - 38631 + T 84 -4.8 -5.28166 | TCGGGTATCTGCATC TTTTGTAG TGCGC CTACAGAA TTTTTCTTCATTTTG Ava_0037 39180 - 38890 - | hypothetical protein Ava_0038 39537 - 39920 + | hypothetical protein TERM 48 39941 - 39965 + T 100 -15.7 -3.14468 | opp_overlap 39942 TTGACCTCTCCCCAA ACCCCTCTCCG ACG CGGAGAGGGGC TTAAATATCCTGAAA TERM 49 39964 - 39942 - T 100 -19.2 -3.53444 | opp_overlap 39941 TGACCTCTCCCCAAA CCCCTCTCCG ACG CGGAGAGGGG CTTAAATATCCTGAA TERM 50 40007 - 40029 + T 100 -14.2 -3.5394 | overlap 39997 ATTAGGGTTTTGAAG CCTCTCTCCT TGC AGGGGAGAGG TTTGGAGAGGGGTTT Ava_0039 45126 - 40066 - | peptidase C14, caspase catalytic subunit p20 TERM 51 40909 - 40919 + g 79 -6.8 -4.7373 | ATAAATTGCTTTGTT CCCT GGT AGGG TTTTTAGTAAACTAC TERM 52 45417 - 45370 - H 70 -8.7 -2.9592 | overlap 45377 ATAGAAATCAACAAT CCTAAAATCTATCCCTTATGG CTTATT CCTTAAGAAATAGACTTTAGA TATAGTCAAGAATAC TERM 53 45505 - 45529 + H 74 -8.1 -3.71998 | AACGTTATGTAGCGC GTTGTTTTTTT TTG AAAAAAATAAC TTATATTACTAGATA TERM 54 46501 - 46465 - g 100 -9.5 -5.86976 | opp_overlap 46467, overlap 46467 TCAGAAAAGAAAAAA CACAGTCACTGGCGTGT GCA AGACACCAGTAACTGTT TCGTTAACTAAGTAT TERM 55 46467 - 46499 + G 74 -7.7 -3.93556 | opp_overlap 46465 46467 AGAAAAGAAAAAACA CAGTCACTGGCGTGT GCA AGACACCAGTAACTG TTTCGTTAACTAAGT TERM 56 46499 - 46467 - g 100 -12.1 -4.55111 | opp_overlap 46467, overlap 46465 AGAAAAGAAAAAACA CAGTCACTGGCGTGT GCA AGACACCAGTAACTG TTTCGTTAACTAAGT Ava_0040 45762 - 46496 + | hypothetical protein TERM 57 46519 - 46553 + T 79 -10.3 -3.16475 | gap 1, opp_overlap 46516 46513, overlap 46525 GTTAACTAAGTATGA CTAAAAGTTAGA-GCT ATTA AGCATCTAGCTTTTAG TTAACTATATACCTA TERM 58 46732 - 46758 + T 100 -13.2 -3.51825 | overlap 46735 TGCACATATTTTTGT GTTGACAGTTGA CGG TTAACTGTCAAC TTCTCATTAGAATAA Ava_0041 47752 - 46754 - | hypothetical protein TERM 59 47188 - 47175 - G 76 -8.1 -4.08767 | GCTATGCGTTCAAAA CCCCA AGGA TGGGG AGTAGGTAAAGTCTG Ava_0042 49103 - 47745 - | radical SAM family protein TERM 60 48084 - 48068 - G 70 -2.9 -4.93365 | overlap 48070 48071 CTGTACAATTAAAAA TATTGCC ATA GGCATCA ACTAATTCCGAATGG Ava_0043 49602 - 49261 - | hypothetical protein TERM 61 49958 - 49926 - H 73 -7 -4.08767 | CTCAGGTTGTCAAAA GTCCATAGTCCAAG CTAGC CCTTGACTCTGGAC TCTGGACTATGGACA Ava_0044 50145 - 51302 + | thiosulphate-binding protein Ava_0045 51352 - 52353 + | phosphate binding protein TERM 62 52501 - 52486 - g 77 -4.8 -5.01497 | ATCACTAGATAAAAA TATATC TGAA GATATA ATAGAAAGGATTGTG TERM 63 53277 - 53288 + G 71 -2.2 -5.18297 | TCAAGACTTTATATG CTGT GGGG GCAG TTTTGTTTGTTCTTA Ava_0046 52424 - 53365 + | phosphate ABC transporter permease Ava_0047 53372 - 54271 + | phosphate ABC transporter permease Ava_0048 54333 - 55160 + | phosphate ABC transporter permease Ava_0049 58002 - 55168 - | HEAT repeat-containing PBS lyase TERM 64 55533 - 55543 + g 78 -5.4 -5.01823 | TTTTTTCAGGTACAG GGTA AAG TACC TTTTGTTGTTGTTGT TERM 65 55983 - 56002 + g 74 -10 -3.10775 | opp_overlap 55981, overlap 55982 ATTGTTCTAAGCAGG CGATCGCT TTTA GGCGATCG GTTTTGAGTAAAGCT TERM 66 56038 - 56058 + g 73 -2.6 -5.1417 | gap 1 CGCACCTTCTACAAT TGGTGATGG GTAT CTA-CACCA TTTTTGCTTTTGTGA Ava_0050 58205 - 58576 + | hypothetical protein Ava_0051 58987 - 60417 + | hypothetical protein TERM 67 60464 - 60446 - f 75 -10.2 -2.75992 | overlap 60443 TTTTACTCAATAGTA GGGTGGGC ATT GCCCACCA AAAGCAAGCTACGTT Ava_0052 60546 - 61724 + | hypothetical protein TERM 68 61778 - 61794 + F 100 -13.7 -3.36518 | opp_overlap 61760 61774, overlap 61793 TACGGGAAGTAGTAG GGTGGGC ATT GCCCACC TTATCAAGGTTTTGG Ava_0053 61940 - 64375 + | filamentous haemagglutinin-like TERM 69 64958 - 64980 + G 70 -5.6 -4.2679 | ATGGCGGACACAAGG CTTTTATCGT CGG GCGGTGAAAG TTTTACTAGAAGTTA Ava_0054 64368 - 67025 + | TPR repeat-containing protein TERM 70 67089 - 67126 + F 74 -9.3 -3.05849 | opp_overlap 67082 67089, overlap 67088 67091 CATTAATACTAATAA CATCAGAAGTTCTTGTG GTAG CAGAAAAGCTTCTGATG ATTTAATTTGCTCGG TERM 71 67126 - 67089 - f 83 -9.3 -3.83155 | opp_overlap 67089 67088 67091, overlap 67082 CATTAATACTAATAA CATCAGAAGTTCTTGTG GTAG CAGAAAAGCTTCTGATG ATTTAATTTGCTCGG TERM 72 67292 - 67280 - g 80 -2.7 -5.42259 | TTATCGCTAAAAAAA TCTCT CAA AGAAA TAGCAGATATCAAAT TERM 73 67441 - 67462 + G 78 -7.3 -4.57073 | opp_overlap 67429 67441 TCATAGAATTATCAA TTCTGGGTA TCAC TCCCCAGAA TTTTTCCAACAAATG Ava_0055 67154 - 68929 + | PAS/PAC sensor Signal transduction histidine kinase Ava_0056 69448 - 68966 - | peptidoglycan binding domain-containing protein TERM 74 69514 - 69530 + H 91 -9.5 -4.65895 | opp_overlap 69513 69512 69514 AGCTCAATTAAAAGT TCACTCA ATC TGAGTGA TTTTTAACTACCCCA TERM 75 69530 - 69514 - H 71 -9.5 -2.54434 | opp_overlap 69514, overlap 69513 69512 AGCTCAATTAAAAGT TCACTCA ATC TGAGTGA TTTTTAACTACCCCA TERM 76 70303 - 70261 - g 76 -10.8 -2.70932 | gap 1, overlap 70263 70275 TTCTTCCCTGAATGA CATCGCTCAACAAACTCGC CAAGCC GCAAGTTTACTG-GCGATG CTGTCTACCGAGGCA Ava_0057 70214 - 71530 + | glutamate-5-semialdehyde dehydrogenase TERM 77 71546 - 71573 + F 77 -9.8 -3.26722 | opp_overlap 71551, overlap 71544 71547 71549 ACACAATTATCTGTA GGATAGGTGGCG ATAG CGCCACCCATCA TCTTGTAAATCTGGG TERM 78 71547 - 71572 + F 87 -13.3 -2.55712 | opp_overlap 71551, overlap 71546 71544 71549 CACAATTATCTGTAG GATAGGTGGCG ATAG CGCCACCCATC ATCTTGTAAATCTGG TERM 79 71549 - 71570 + F 75 -10.1 -2.81313 | opp_overlap 71551, overlap 71547 71546 71544 CAATTATCTGTAGGA TAGGTGGCG ATAG CGCCACCCA TCATCTTGTAAATCT TERM 80 71568 - 71551 - f 86 -12.7 -2.79302 | opp_overlap 71549 71547 71546 71544 ATTATCTGTAGGATA GGTGGCG ATAG CGCCACC CATCATCTTGTAAAT TERM 81 71839 - 71849 + F 70 -5.4 -4.4715 | opp_overlap 71831, overlap 71827 71826 TGTTAAATTAACAGT GCTA ATT TAGC TTTTATGAATTAAAA TERM 82 72720 - 72695 - g 70 -7.5 -3.76839 | opp_overlap 72698 CAACGCCAACCTAAA CCACCATCTGT AAAT ACGGGTGGTGG TTCACAAGTTTTGCC Ava_0058 72155 - 73198 + | response regulator receiver domain-containing protein Ava_0059 73215 - 73592 + | response regulator receiver domain-containing protein Ava_0060 73597 - 74106 + | CheW protein TERM 83 75392 - 75373 - g 76 -2.8 -5.27335 | overlap 75377 75390 GCGGTCAAACAAAAA GGATTTGT CGTG ACCAACCC TGACCAGGAATGGCA TERM 84 75695 - 75671 - g 78 -9.3 -3.68619 | CCCAAGCCACCGAAA TCAACCGCACC TTA GACGCAGTTGA TAAAATGACCCATTC Ava_0061 74149 - 76407 + | chemotaxis sensory transducer TERM 85 76661 - 76637 - g 76 -2.7 -5.28176 | overlap 76641 TTGACTTAGAAAAAA TTAACGGCGCA TTA CGCGCTGCTCA CTCAATTAAGGGCGG TERM 86 77087 - 77071 - g 74 -7.9 -4.02817 | TGTTTACAAGAAGAA GTCGCCA TCA TGGCGGC GGAATTGGGCGGTTT TERM 87 77696 - 77673 - g 71 -4.6 -4.58466 | overlap 77677 CCTAGAACGAGAAAA TCAAGAATTG CGGA CAATTCACGA GCGAAAAACCACCAA TERM 88 77986 - 77943 - g 82 -10.5 -3.66017 | gap 1, opp_overlap 77943 77942 ACAATTACAAACCAA GCTCAACCATATCCGA-ATG CGCCC CATGTCGGACTTAGTTGAGC GTTTCCCCAGAGCCA TERM 89 78564 - 78554 - g 75 -5.4 -4.87052 | opp_overlap 78554, overlap 78546 78545 TAGAAACCAACAAAA TGCT GTT AGCA TTTCCTACCGATGTG Ava_0062 76513 - 79437 + | CheA Signal transduction histidine Kinases (STHK) Ava_0063 80324 - 79620 - | serine/threonine protein kinase Ava_0064 85761 - 80617 - | Signal transduction histidine kinase TERM 90 86061 - 86078 + H 70 -8.5 -3.31322 | CACTTGTATGTTTTG TTGACTG GTGA CAGTCAA TTGTCAAGCATTAGC Ava_0065 86470 - 87060 + | response regulator receiver domain-containing protein Ava_0066 87086 - 88219 + | response regulator receiver sensor signal transduction histidine kinase Ava_0067 88691 - 91012 + | signal transduction protein TERM 91 91130 - 91100 - T 100 -19.8 -3.85698 | TTTCTGTCTTACAAA GTTCAGAGCGCCTG CTT CCGGCGCTCTGAAC TTGGGGCTAAATCGT Ava_0068 93052 - 91211 - | AAA ATPase, central region Ava_0069 95002 - 93095 - | anion-transporting ATPase Ava_0070 95723 - 95040 - | hypothetical protein Ava_0071 95876 - 96190 + | hypothetical protein TERM 92 96212 - 96199 - T 76 -9.5 -3.34629 | opp_overlap 96199, overlap 96192 ATATTAAACTATTAA CCCGC GAAA GCGGG TTTTTAATAGTTCAA TERM 93 96199 - 96212 + T 100 -9.5 -4.81083 | opp_overlap 96199 96192 ATATTAAACTATTAA CCCGC GAAA GCGGG TTTTTAATAGTTCAA Ava_0072 96692 - 96315 - | gas vesicle G TERM 94 96425 - 96413 - G 95 -7.7 -5.09762 | ATGCTAATATAAAAA GAGGT TTT ACCTC TAAATCATCATCTTC Ava_0073 97440 - 96706 - | gas vesicle synthesis GvpLGvpF Ava_0074 98019 - 97546 - | gas vesicle protein GVPa TERM 95 98102 - 98092 - R 70 -5.4 -4.45765 | opp_overlap 98092 TTTAAAATTAAGAAA GTGA GTA TCAC TTGATGTTAAAAAAT Ava_0075 98609 - 98163 - | gas vesicle protein GVPa Ava_0076 99862 - 98606 - | ATPase associated with various cellular activities TERM 96 100102 - 100142 + r 86 -8.4 -4.51363 | gap 1 TCATTGTTGAATCTG CCCCCTTGTCTGACCAGTT GTCT AACTG-TAAGATTAGGGGG TTTTACTATTTAGTC Ava_0077 100678 - 100289 - | gas vesicle protein GVPc TERM 97 100751 - 100715 - R 100 -15.5 -3.36135 | overlap 100704 ACAATCGTCAATTAA CTACATTTACTGGATAA TGG CTATCCAATAAATGTAG CTAAAACAATACTTA TERM 98 100863 - 100837 - R 76 -7.5 -4.09015 | opp_overlap 100837, overlap 100828 100826 AAAACAGATTACAAA TCAGAATTATT TAAGC AATAATCCTGA TTTTATTACACCTAC TERM 99 100837 - 100863 + r 73 -5.3 -4.64676 | opp_overlap 100828 100826 100837 AAAACAGATTACAAA TCAGAATTATT TAAGC AATAATCCTGA TTTTATTACACCTAC Ava_0078 101101 - 100886 - | gas vesicle synthesis protein GvpA Ava_0079 101421 - 101206 - | gas vesicle synthesis protein GvpA TERM 100 101559 - 101543 - H 73 -2.3 -5.37345 | TGCAAGTATAAAAAA CTTTAAA AAA TGTAAAG GCGAAAATATTTTAA TERM 101 101829 - 101868 + H 86 -8.2 -4.36914 | opp_overlap 101808 101832, overlap 101808 AATATTGCTATTACT TAATTCTTGAAGAAAT AACATAGG ATATCTTCAAGAATTA TTTTGTGACAAAAAC Ava_0080 101885 - 102151 + | hypothetical protein TERM 102 102180 - 102204 + F 75 -10.1 -2.93382 | opp_overlap 102185, overlap 102171 102183 TGTCAGCTTAGATTC ACAGACTAAGT TTT ACTTAGTCTGC TATATCAATCTCAGG TERM 103 102183 - 102201 + F 76 -10.4 -2.70826 | opp_overlap 102185, overlap 102171 102180 CAGCTTAGATTCACA GACTAAGT TTT ACTTAGTC TGCTATATCAATCTC TERM 104 102499 - 102474 - f 74 -9.7 -2.74515 | opp_overlap 102488, overlap 102473 102462 AAAGAGGCGGGAAAC TCCATCCCCTC GTGG GAGGAGAGGGA TAGCCGCCCCGCCGT TERM 105 103902 - 103889 - g 82 -4.5 -5.36314 | GAAAATAGTAAAAAA GCCTG CTAT CAAGC ACTCATCGAATCGCC Ava_0081 102908 - 104155 + | hypothetical protein Ava_0082 104299 - 106608 + | hypothetical protein TERM 106 106750 - 106705 - f 100 -18.7 -3.36273 | opp_overlap 106692 106689 106707 106709, overlap 106689 106707 106709 GCCCTGTAAGATGAA CACACATTTTTCAGGTCAGTT AATT AACTGACCTGAAAAATGTATT TATTATTTCGTAAAT TERM 107 106707 - 106748 + F 100 -19.1 -4.60258 | opp_overlap 106689 106705 106707 106709, overlap 106692 106689 106709 CCTGTAAGATGAACA CACATTTTTCAGGTCAGTT AATT AACTGACCTGAAAAATGTA TTTATTATTTCGTAA TERM 108 106748 - 106707 - f 100 -21.3 -3.25073 | opp_overlap 106692 106689 106707 106709, overlap 106689 106705 106709 CCTGTAAGATGAACA CACATTTTTCAGGTCAGTT AATT AACTGACCTGAAAAATGTA TTTATTATTTCGTAA TERM 109 106746 - 106709 - f 100 -21.7 -3.18768 | opp_overlap 106692 106689 106707 106709, overlap 106689 106707 106705 TGTAAGATGAACACA CATTTTTCAGGTCAGTT AATT AACTGACCTGAAAAATG TATTTATTATTTCGT TERM 110 106709 - 106746 + F 100 -21.7 -3.89937 | opp_overlap 106689 106709 106707 106705, overlap 106692 106689 106707 TGTAAGATGAACACA CATTTTTCAGGTCAGTT AATT AACTGACCTGAAAAATG TATTTATTATTTCGT TERM 111 108298 - 108312 + G 70 -7.2 -3.83705 | opp_overlap 108297, overlap 108308 TCGAGATAACGAAGT TGATGA CAG TCATCA TTTAATGCTGGTTTT TERM 112 110176 - 110164 - g 71 -3.4 -5.02074 | TCAGGCTGTAAAAAA TGCT GAATT AGCA CAGCAGTATGAAGTT TERM 113 112093 - 112117 + G 72 -7.2 -4.06562 | opp_overlap 112087 TACCATAGAGTGCAT TTCTACACCT GGGCA AGGTGCAGAA TTTATCATTCAAATT Ava_0083 106817 - 112159 + | Serine/threonine protein kinase and Signal transduction histidine kinase (STHK) with GAF sensor TERM 114 112681 - 112662 - g 70 -7.8 -3.72576 | opp_overlap 112657 TCGGTCGTTATCAAA TCCGCCAA ATGT TAGGCGGA GGTGGATTTGGTAAA Ava_0084 112628 - 114013 + | Serine/threonine protein kinase Ava_0085 114953 - 114051 - | sensor protein TERM 115 114522 - 114501 - G 81 -7.3 -4.66537 | CCTGGCAATATAAAA TACTGTGCC TTCA GGCAAAGTA CGAAAGCTAGCAATT Ava_0086 115396 - 115920 + | hypothetical protein TERM 116 116009 - 115972 - T 95 -11.5 -4.60487 | gap 1, opp_overlap 115972 CATCACTGCTAAAAA CCCTACCTCGTTTTAGCT GAT AGC-AAAATAAGGTAGGG TTTTGTGGTAATTTA TERM 117 115972 - 116009 + T 95 -11.5 -4.52703 | gap 1, opp_overlap 115972 CATCACTGCTAAAAA CCCTACCTCGTTTTAGCT GAT AGC-AAAATAAGGTAGGG TTTTGTGGTAATTTA Ava_0087 116459 - 116031 - | hypothetical protein Ava_0088 117380 - 116511 - | HtpX-2 peptidase TERM 118 117920 - 117862 - H 100 -19.1 -3.35597 | gap 2, opp_overlap 117865, overlap 117864 117865 TTGATTTTTGAAATA TACGTAGGGTGGGCATTGCCCACCAAAAC CAT GAGCCGGTGGGCAATGCCCACCCTAC-T- TGAATTTTGCGGAAA TERM 119 117920 - 117864 - H 100 -26.7 -3.24708 | opp_overlap 117865, overlap 117862 117865 GATTTTTGAAATATA CGTAGGGTGGGCATTGCCCACCAAAAC CAT GAGCCGGTGGGCAATGCCCACCCTACT TGAATTTTGCGGAAA TERM 120 117865 - 117919 + H 100 -27.5 -3.36823 | opp_overlap 117862 117864 117865 ATTTTTGAAATATAC GTAGGGTGGGCATTGCCCACC AAAACCATGAGCC GGTGGGCAATGCCCACCCTAC TTGAATTTTGCGGAA TERM 121 117919 - 117865 - H 100 -30.2 -2.54504 | opp_overlap 117865, overlap 117862 117864 ATTTTTGAAATATAC GTAGGGTGGGCATTGCCCACCAAAAC CAT GAGCCGGTGGGCAATGCCCACCCTAC TTGAATTTTGCGGAA TERM 122 118218 - 118253 + H 90 -9.1 -4.40601 | gap 1, opp_overlap 118204 CTAGAAGGCTGATGA CTCCTACTACTCTTGC TTGCT GCGGGAG-GGTAGGAG TTTGTTGTATACATT TERM 123 119037 - 119047 + G 78 -5.4 -4.92756 | GATACCGTAATTGCC GCTA GTT TAGC TTTATTTTTAGTAAT Ava_0089 118326 - 119957 + | Sodium/hydrogen exchanger Ava_0090 120064 - 121200 + | glycosyl transferase, group 1 TERM 124 121357 - 121367 + G 71 -6.8 -4.19177 | CGCTTTATTGCGTCG GGTC AAA GACC TTTCTGTTAACGAAT Ava_0091 121274 - 123853 + | adenylate/guanylate cyclase Ava_0092 124342 - 124058 - | hypothetical protein Ava_0093 125194 - 125931 + | phosphoribosylaminoimidazole-succinocarboxamide synthase Ava_0094 126211 - 128727 + | surface antigen variable number lpxC 128861 - 129703 + | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase fabZ 129780 - 130295 + | (3R)-hydroxymyristoyl-ACP dehydratase TERM 125 130445 - 130457 + F 72 -7.7 -3.68351 | TTCGCCCGACACTTT TGGTC ACT GACCA TTTACATACTCAGCA Ava_0097 130544 - 131362 + | UDP-N-acetylglucosamine acyltransferase lpxB 131492 - 132646 + | lipid-A-disaccharide synthase Ava_0099 133137 - 132913 - | hypothetical protein Ava_0100 133838 - 133254 - | hypothetical protein Ava_0101 134074 - 135369 + | C-5 cytosine-specific DNA methylase TERM 126 135426 - 135402 - T 72 -9.3 -2.62263 | overlap 135404 AGGTTTTTTACACTA CACCCCAAAAC ACG GGTTTAGGGTG TAGGGGTATAGGGGT Ava_0102 136359 - 135499 - | hypothetical protein Ava_0103 137841 - 136399 - | hypothetical protein TERM 127 137561 - 137575 + g 78 -4.2 -5.22312 | opp_overlap 137542 GCGGGAACGCCTAGT TCTGGC CCT GGCAGA TTTTTTGGTGTGCGT TERM 128 137751 - 137770 + g 76 -7.8 -4.11216 | CATTGTGGTCAATGT CTGGGCGA TCGC TCACCCAG TTTTCGGGATCGGGG Ava_0104 139547 - 138309 - | putative acyl-CoA dehydrogenase TERM 129 139085 - 139096 + g 70 -7.2 -3.82442 | opp_overlap 139078 TCAGACGATAGCCGT CGCC ATCG GGCG TTAATTTTGTATTCA Ava_0105 140966 - 139620 - | nitrilotriacetate monooxygenase component A Ava_0106 142233 - 141145 - | luciferase-like TERM 130 142802 - 142820 + G 74 -4.4 -5.00616 | overlap 142797 142804 TTTACCTGCTTTACG CTGGCGTA ACT TTCGCCTG TTTTTTGGCGGACAG Ava_0107 142731 - 144002 + | hypothetical protein TERM 131 144082 - 144049 - f 76 -6.8 -4.41348 | gap 2, overlap 144051 TTTCTGTGAAACAAA CATCTCCCGCTACACC GTGA GGT-TAGCGGG-GAAG CGTAATCAAAATATC TERM 132 144080 - 144051 - f 72 -8 -3.81557 | gap 2, overlap 144049 TCTGTGAAACAAACA TCTCCCGCTACACC GTGA GGT-TAGCGGG-GA AGCGTAATCAAAATA Ava_0108 144254 - 145258 + | aldo/keto reductase Ava_0109 146028 - 145357 - | HAD family hydrolase TERM 133 145751 - 145761 + g 71 -2.4 -5.22481 | AATACTTCGCTAATG CCTG GAA CTGG TTTTATTTCTTTCTC Ava_0110 147094 - 146216 - | sodium symporter TERM 134 147214 - 147248 + r 85 -10 -3.89614 | opp_overlap 147220, overlap 147219 147220 TCTGGAAAACCCCTC TCCAAACCTCTCCCCT GCA AGGAGAGAGGCTTTGA TTTCTCCCCCTTCCC TERM 135 147219 - 147243 + r 79 -8.5 -4.13995 | opp_overlap 147220, overlap 147214 147220 AAAACCCCTCTCCAA ACCTCTCCCCT GCA AGGAGAGAGGC TTTGATTTCTCCCCC TERM 136 147242 - 147220 - R 100 -14.2 -3.5394 | opp_overlap 147219 147214 147220 AAACCCCTCTCCAAA CCTCTCCCCT GCA AGGAGAGAGG CTTTGATTTCTCCCC TERM 137 147220 - 147242 + r 85 -12 -3.07915 | opp_overlap 147220, overlap 147219 147214 AAACCCCTCTCCAAA CCTCTCCCCT GCA AGGAGAGAGG CTTTGATTTCTCCCC Ava_0111 149697 - 147337 - | sulfatase TERM 138 147578 - 147591 + g 78 -5.3 -4.94902 | AACCGGATTGTAGAT TTACC GGAG GGTAA TTTTTCTGGTGATTG Ava_0112 150790 - 149795 - | hypothetical protein TERM 139 150217 - 150229 + g 100 -7.7 -5.252 | AGGGAAATATTCCTT GCCAA GTG TTGGC TTTTTTCTCCGAGTA Ava_0113 151856 - 151209 - | HAD family hydrolase TERM 140 151924 - 151894 - R 80 -9.8 -3.53444 | opp_overlap 151896, overlap 151895 TTATTCCGTTTCAAA TCGTTGACGGTTAA CAG TCAACCGTCAACAG CCAACTAACTTTGAT TERM 141 151923 - 151895 - R 88 -13.3 -2.71924 | opp_overlap 151896, overlap 151894 TATTCCGTTTCAAAT CGTTGACGGTTAA CAG TCAACCGTCAACA GCCAACTAACTTTGA Ava_0114 153078 - 152167 - | hypothetical protein ruvC 154227 - 153736 - | Holliday junction resolvase Ava_0116 154399 - 155769 + | hypothetical protein TERM 142 156018 - 156032 + T 76 -9.2 -3.30124 | overlap 156007 TGAGCCAGCGCGTTG CGGGGG TTC CCTCCG TTGTAGCGACTGGCG Ava_0117 156335 - 156111 - | hypothetical protein TERM 143 156507 - 156491 - H 76 -4.5 -5.07652 | GTGGGGAAAAGAAAA TCATTAG CAA CTAATAA CTGTACAGACGCGAT Ava_0118 156563 - 157021 + | hypothetical protein TERM 144 158229 - 158242 + T 76 -6.7 -4.4078 | opp_overlap 158229 TTAGCTTGAATAAAA GATGC GATC GCATC TTTTACTTGAGGCCC TERM 145 158242 - 158229 - T 78 -6.7 -4.64676 | opp_overlap 158229 TTAGCTTGAATAAAA GATGC GATC GCATC TTTTACTTGAGGCCC Ava_0119 159382 - 158210 - | patatin TERM 146 159185 - 159197 + g 88 -3.4 -5.75342 | CTGATACATTTGAAC TAGC TCACT GCTA TTTTTTTTCGCGGCA Ava_0120 160808 - 159489 - | dihydroorotase TERM 147 161491 - 161477 - g 84 -3.5 -5.5353 | overlap 161478 TATATCAATAAAAAA CCCCT GAATG AAGGG ACATATCTCGACTCC Ava_0121 161099 - 161746 + | thylakoidal processing peptidase TERM 148 162187 - 162177 - g 71 -6.8 -4.14243 | overlap 162178 TACCCTAGCGCAAAA CTCC CAA GGAG GATTCCCTGATGATT Ava_0122 161854 - 162642 + | MOSC Ava_0123 163484 - 165319 + | response regulator receiver modulated diguanylate cyclase/phosphodiesterase TERM 149 165582 - 165561 - f 72 -8 -3.64703 | opp_overlap 165559 165561 TTTTCCTTATTCAAA CTCCACCC ATAAAG GGATGGAG TATTCTGAATTCTGT Ava_0124 165708 - 167120 + | response regulator receiver Signal transduction histidine kinase Ava_0125 167223 - 168374 + | 4Fe-4S ferredoxin, iron-sulfur binding Ava_0126 168414 - 170153 + | single-stranded nucleic acid binding R3H TERM 150 170181 - 170212 + F 91 -9.5 -4.45544 | opp_overlap 170181 TGTCAAGTAAATCCA GCGATCGCTCT CCAGTATTTT AGGGCGATCGC TTTTAGTTGGTAAAA Ava_0127 170245 - 171285 + | arginase/agmatinase/formiminoglutamase TERM 151 171900 - 171871 - g 70 -5.7 -4.34488 | gap 1 CAGATGCAGAAGAAA CAGCCGCCATCGAG GGT CTTGATGGTG-CTG AGTGGATGGGTCGTG Ava_0128 171705 - 172016 + | RNA-binding region RNP-1 TERM 152 172051 - 172069 + T 95 -5.2 -6.02546 | overlap 172053 AGCTAAATTCTTGAG GTCAGGCA AGT TGTCTGCC TTTTTTTTCATTTAA Ava_0129 173285 - 172215 - | hypothetical protein Ava_0130 173505 - 175091 + | peptidase M48, Ste24p TERM 153 175920 - 175930 + G 71 -6.8 -4.21908 | CGATCTTTACAACTT GGGT AGC ACCC TTTTAGGTAATGGTA Ava_0131 175324 - 176103 + | hypothetical protein TERM 154 176170 - 176151 - T 80 -10 -3.53712 | gap 1, overlap 176147 176152 ATTCTCAATAAGCAA GTGGTGGGC AAT GCCCACC-C TACTAAATAATCAGC TERM 155 176170 - 176152 - T 74 -10.2 -2.71745 | overlap 176151 176147 TTCTCAATAAGCAAG TGGTGGGC AAT GCCCACCC TACTAAATAATCAGC TERM 156 176252 - 176276 + T 100 -12.9 -4.92828 | opp_overlap 176256 TATGTACATTTGTCA TAGAGTGAGCC AAA GGCCCACTCTA TTTATTTTTGAATTT TERM 157 176272 - 176256 - T 75 -10.1 -2.88249 | opp_overlap 176252 TACATTTGTCATAGA GTGAGCC AAA GGCCCAC TCTATTTATTTTTGA Ava_0132 177206 - 176397 - | hypothetical protein TERM 158 177288 - 177250 - R 86 -5.5 -5.27779 | gap 1, opp_overlap 177254, overlap 177254 TTTAACACCAAAAAA TAAAGACGCAA-AGCA GTTTTGTT TGCTGTTGCGTCTTTT TTAGTGATTTAAAAG TERM 159 177254 - 177284 + r 90 -7 -5.243 | gap 1, opp_overlap 177254 177250 ACACCAAAAAATAAA GACGCAA-AGCAG TTTTGT TTGCTGTTGCGTC TTTTTTAGTGATTTA TERM 160 177284 - 177254 - R 83 -6.3 -5.10526 | gap 1, opp_overlap 177254, overlap 177250 ACACCAAAAAATAAA GACGCAA-AGCA GTTTTGTT TGCTGTTGCGTC TTTTTTAGTGATTTA Ava_0133 178305 - 177310 - | ketol-acid reductoisomerase TERM 161 178122 - 178137 + g 86 -6.8 -4.92783 | CATTTTTTACGGTTA GCCCAG CTGC TTGGGC TTTTTCTGCTGACTT Ava_0134 179420 - 178566 - | aldo/keto reductase TERM 162 179568 - 179621 + r 100 -17.8 -4.08767 | gap 1, opp_overlap 179580 179582 TCTTGCGTCAGTGCT GTCCATAGTCAAGAGTCCAGAGTCA AAGGC TAGCT-TGGACTCTTGACTGTGGAC TTTTGACAACCTGAG TERM 163 179614 - 179582 - R 75 -9.2 -3.12327 | opp_overlap 179568, overlap 179580 TGTCCATAGTCAAGA GTCCAGAGTCAAAG GCTAG CTTGGACTCTTGAC TGTGGACTTTTGACA Ava_0135 180119 - 179691 - | nuclease (SNase-like) Ava_0136 180978 - 180184 - | hypothetical protein TERM 164 181103 - 181065 - R 73 -3.2 -5.14563 | gap 1, overlap 181067 GTTTTGAGTAAAAAA TTTCTGTAGAGACAGCG ATTGAA CGC-GTCTCTACCAAGA CTCAGCACGAGCAGA Ava_0137 181488 - 181150 - | nitrogen regulatory protein P-II Ava_0138 182473 - 181880 - | hypothetical protein TERM 165 182580 - 182568 - H 73 -3.3 -5.21506 | AGAATAATAGAAAAA TGCTC GGA GTGCA AAGATATCTAAATTT Ava_0139 182755 - 183192 + | glyoxalase I TERM 166 183624 - 183588 - f 73 -9.5 -2.82529 | TATAACCATTAATCA GGGCTGTTAGCTGTTAA GTG TCAACAGTCAACACCCC CCCACGATGGATTGT TERM 167 185009 - 184995 - g 80 -6.4 -4.8622 | overlap 185004 CCGCCCAATTAAAAA TGGAGA TTA CCTCCA AACCAGCAGACTTGG Ava_0140 183779 - 186409 + | ATPase TERM 168 186987 - 186950 - g 85 -2.2 -5.90231 | gap 2, overlap 186951 186952 ACAAAGATAAAAAAA CCCTGTCCATCACCGATA ACGG TATCGGT-ATG-ACAGCA GAGGAAGTCAAAAAA TERM 169 188119 - 188109 - g 78 -5.4 -5.04175 | CGAACTACACAAAAA CCAA GGC TTGG AAGTGCTGTTCCTCG Ava_0141 186736 - 188712 + | heat shock protein 90 rpmB 188991 - 189227 + | 50S ribosomal protein L28 TERM 170 189341 - 189369 + F 71 -9 -3.11291 | opp_overlap 189341 189338 189365 TTCTGCCTCAAAGAC CTATGTGGGT GAATCATAA ACCCACATAG TCTTAAGATTATGAA TERM 171 189493 - 189457 - f 71 -7.3 -3.87737 | overlap 189450 189454 CATAAATACTAACAA GGGCTGTTAACTGTCAA CGC TCAATGGTCAACAGCCC TTACGATGGATCTGG Ava_0143 190454 - 191647 + | hypothetical protein Ava_0144 192114 - 192797 + | cyclic nucleotide-binding domain-containing protein TERM 172 193673 - 193684 + G 73 -5.8 -4.56597 | opp_overlap 193666 193670, overlap 193670 193663 TGTCAGAAGTAACGG TGCG TTAC CGCA TTTTTGCAAACGAAC TERM 173 195125 - 195085 - g 72 -10 -2.75022 | gap 2, opp_overlap 195092 195095 195124, overlap 195084 195095 CTGGCGATACAGAAT CCTAACGCAACGCAGCAA GAAAACT TTGCTGCG-TG-GTTAGG TGCTGCCATCTCTAC TERM 174 195092 - 195120 + G 72 -9.6 -3.09834 | opp_overlap 195085 195084 195095, overlap 195095 TACAGAATCCTAACG CAACGCAGCAAG AAAAC TTTGCTGCGTGG TTAGGTGCTGCCATC TERM 175 195095 - 195117 + G 72 -9.9 -2.76263 | opp_overlap 195085 195084 195095, overlap 195092 AGAATCCTAACGCAA CGCAGCAAG AAAAC TTTGCTGCG TGGTTAGGTGCTGCC TERM 176 195117 - 195095 - g 72 -9.2 -3.19513 | opp_overlap 195095 195092, overlap 195085 195084 AGAATCCTAACGCAA CGCAGCAA GAAAACT TTGCTGCG TGGTTAGGTGCTGCC Ava_0145 193366 - 195150 + | peptidase M61 TERM 177 195541 - 195514 - T 82 -7.7 -4.43669 | opp_overlap 195514 ACTTAAAAAAGTAAA CGCACCTTGTC AATACA GCCAAAGTGCG TTGTTTGAAATCAGT Ava_0146 196154 - 195645 - | allophycocyanin subunit beta Ava_0147 196514 - 197938 + | L-glutamine synthetase TERM 178 197981 - 197996 + T 100 -10.4 -5.53436 | opp_overlap 197979 AGAGTCAAAATATTG CCACCC ATAA GGGTGG TTTTTTGTCTTCTGT Ava_0148 198304 - 198101 - | hypothetical protein Ava_0149 198560 - 199615 + | UbiE/COQ5 methyltransferase Ava_0150 200275 - 200042 - | hypothetical protein Ava_0151 202148 - 200361 - | hypothetical protein Ava_0152 202589 - 203386 + | hypothetical protein Ava_0153 204853 - 203396 - | Serine/threonine protein kinase Ava_0154 205069 - 206139 + | zinc-containing alcohol dehydrogenase superfamily protein TERM 179 207170 - 207193 + G 83 -9.6 -4.0641 | gap 1 ATGATGTGGGGAATG CGATCGCT-CC TTT GGCGGCGATCG TTTATATCAATCAAA Ava_0155 206209 - 207594 + | phosphate transporter TERM 180 207625 - 207635 + T 70 -6.8 -4.07618 | opp_overlap 207623 207625 GATATGAGTTAAATA TCGG AAT CCGA TTTGATTATTAAAAA TERM 181 207703 - 207687 - T 100 -13.7 -3.48684 | opp_overlap 207679 CTACAACCATGATAA GGTGGGC ATT GCCCACC CTACTACGTATATTT Ava_0156 208010 - 207795 - | hypothetical protein Ava_0157 208316 - 210571 + | hypothetical protein TERM 182 210950 - 210971 + F 75 -9.5 -3.25088 | gap 1, opp_overlap 210950 CTCGGCAGATAAGAA CGCTCCATTG ATT CAATGG-GCG TTAGTGAGTTTGGCG TERM 183 210971 - 210950 - f 83 -9.5 -3.88232 | gap 1, opp_overlap 210950 CTCGGCAGATAAGAA CGCTCCATTG ATT CAATGG-GCG TTAGTGAGTTTGGCG TERM 184 211341 - 211362 + F 72 -8.1 -3.50572 | opp_overlap 211348 TAAGATACAAGCAGT CTAGTAACA ACAC TGTTGCTAG TTATATGCCATAAAT hetR 211521 - 212420 + | heterocyst differentiation control protein Ava_0159 213924 - 212701 - | succinyldiaminopimelate transaminase TERM 185 213652 - 213663 + g 75 -3 -5.1356 | TGTTTCGGGATCGAC TTTG ACCC CAAA TTTTTGTTCATACCA TERM 186 213941 - 213998 + r 74 -9.4 -3.07355 | opp_overlap 213946 213948, overlap 213946 AGTCATTAGTCAGTA GTCAATAGTCAATAGTCGATGGTC GTTACTGATG GACTATGGACTATGGACTATGGAC TAATTATTATTTAAA Ava_0160 214333 - 213998 - | thioredoxin-related TERM 187 214480 - 214458 - R 78 -6.3 -4.8269 | gap 1, opp_overlap 214458, overlap 214449 GACAATGATTAAAAA TCCCACAACC AAGA GGC-GTGGGA TTAACTAAAAATTTG Ava_0161 215286 - 214510 - | phage shock protein A, PspA Ava_0162 216294 - 215449 - | phage shock protein A, PspA TERM 188 215737 - 215748 + g 79 -3 -5.27779 | TGAGCGAGCGCGAGC GATA TACA TATC TTTTTTAGTCTTCGC TERM 189 216066 - 216087 + g 72 -7.3 -4.00042 | overlap 216068 TTTCCATGACAGCTT GTTCCAGAA TTTT TTCTGGATC TTCTTTACTGGCCAC TERM 190 216068 - 216085 + g 73 -8.5 -3.59252 | overlap 216066 TCCATGACAGCTTGT TCCAGAA TTTT TTCTGGA TCTTCTTTACTGGCC Ava_0163 217713 - 216394 - | hypothetical protein TERM 191 217374 - 217390 + g 70 -3.6 -4.91109 | GTGAGGATAGATTTT CCCCAC TAGGT GTTGGG TTTTTGTCGTGAACA TERM 192 217507 - 217519 + g 72 -7.7 -3.8211 | CAATGGCTGAGTATG TGCCA TTG TGGCA TTCTTATCGGTCAAC TERM 193 218430 - 218416 - g 78 -4.2 -5.1417 | CCACAAAAGGAAAAA CCCCAC TCA ATAGGG TTACATAGCCAACAT Ava_0164 218107 - 218664 + | hypothetical protein TERM 194 219340 - 219305 - g 76 -6.9 -4.48741 | overlap 219277 TAACTCAGGAGAAAA CTGCCTCTACTTCTG AACAAG CAAAAGCTGAGACAG TACTTATTTAACCAT Ava_0165 219112 - 219351 + | hypothetical protein Ava_0166 220335 - 219502 - | naphthoate synthase Ava_0167 220430 - 221302 + | hypothetical protein Ava_0168 222933 - 221317 - | hypothetical protein Ava_0169 223490 - 224431 + | phosphoribulokinase TERM 195 224516 - 224496 - f 73 -6.9 -4.12188 | CGACTAGTCCGAAAA GACATATAG TAT CTAAATGTC AAGCACTCATACTGG TERM 196 224748 - 224766 + G 76 -6.8 -4.57341 | GAGCGATTTATTTCA TGAAGATG TGC CATTTTCA TTTTTACAAGAAATT Ava_0170 224512 - 225300 + | Phage Gp37Gp68 Ava_0171 225314 - 226186 + | hypothetical protein radC 226298 - 227029 + | DNA repair protein RadC Ava_0173 228119 - 227079 - | WD-40 repeat-containing protein Ava_0174 228529 - 228233 - | hypothetical protein TERM 197 228810 - 228776 - R 95 -13 -4.27467 | opp_overlap 228776, overlap 228783 CTATAAGTTAATAAA GTCAAAACCAGCTAGA TAC TCCAGCTGGCTCTAAC TCTGCTAATTACTAG TERM 198 228803 - 228783 - R 100 -11.9 -4.42851 | opp_overlap 228776, overlap 228776 TTAATAAAGTCAAAA CCAGCTAGA TAC TCCAGCTGG CTCTAACTCTGCTAA TERM 199 229056 - 229032 - R 84 -9.9 -3.77831 | opp_overlap 229033 229033, overlap 229033 GGAGTAAGATTCAAA GCCTCTCTCCG CTT CGGGGAGAGGT TTGGAGAGGGGTTTC TERM 200 229033 - 229055 + r 100 -15.6 -3.5394 | opp_overlap 229032 229033, overlap 229033 GAGTAAGATTCAAAG CCTCTCTCCG CTT CGGGGAGAGG TTTGGAGAGGGGTTT TERM 201 229055 - 229033 - R 90 -13.4 -2.86217 | opp_overlap 229033 229033, overlap 229032 GAGTAAGATTCAAAG CCTCTCTCCG CTT CGGGGAGAGG TTTGGAGAGGGGTTT Ava_0175 229366 - 229196 - | CAB/ELIP/HLIP-related protein Ava_0176 229675 - 230763 + | L-alanine dehydrogenase TERM 202 230814 - 230838 + T 100 -15.7 -3.55761 | overlap 230815 TGCTTCCCGCAGGGT ACCTCTCCCCG ACG CGGGGAGAGGC TTTAAAACGTCAATA TERM 203 230815 - 230837 + T 100 -19.2 -2.73243 | overlap 230814 GCTTCCCGCAGGGTA CCTCTCCCCG ACG CGGGGAGAGG CTTTAAAACGTCAAT TERM 204 230894 - 230922 + T 100 -18.9 -3.04398 | opp_overlap 230894 230895, overlap 230894 GCGTCGGAGCGAAAA GTCTGAGCGCCGG CTT CCGGCGCTCAGAA CTTTTCAAGAGAGAG TERM 205 230894 - 230923 + T 100 -18.7 -4.07568 | gap 1, opp_overlap 230894 230895, overlap 230894 GCGTCGGAGCGAAAA G-TCTGAGCGCCGG CTT CCGGCGCTCAGAAC TTTTCAAGAGAGAGG TERM 206 230922 - 230894 - T 100 -18.9 -4.18018 | opp_overlap 230894 230894, overlap 230895 GCGTCGGAGCGAAAA GTCTGAGCGCCGG CTT CCGGCGCTCAGAA CTTTTCAAGAGAGAG TERM 207 230921 - 230895 - T 100 -22.4 -3.10597 | opp_overlap 230894 230894, overlap 230894 CGTCGGAGCGAAAAG TCTGAGCGCCGG CTT CCGGCGCTCAGA ACTTTTCAAGAGAGA Ava_0177 231850 - 231056 - | phosphonate ABC transporter permease Ava_0178 232730 - 231996 - | ABC transporter-like TERM 208 232839 - 232859 + r 81 -6.9 -4.55491 | overlap 232840 GGGCTGAACGCCCTT GTTAGTGCT TAC AGCACTAAA TTTTATGGTTCGATG TERM 209 232840 - 232858 + r 80 -10.4 -3.32572 | overlap 232839 GGCTGAACGCCCTTG TTAGTGCT TAC AGCACTAA ATTTTATGGTTCGAT Ava_0179 233836 - 232862 - | phosphonate-binding periplasmic protein TERM 210 233623 - 233613 - G 88 -6.8 -5.24129 | opp_overlap 233613 TCCTTTGATAAAAAA GCTG CTA CAGC ATCTGCCTTAGATTG Ava_0180 234265 - 234672 + | hypothetical protein TERM 211 234738 - 234682 - T 100 -14.1 -3.43081 | opp_overlap 234685, overlap 234685 AGATAATTTTAAAGA TAATAGGTAATAGATAATGGGTAGTAG GCG CTCTTACCAATTACCTATCACCTATTA ATAAAAACCCATCCG TERM 212 234735 - 234685 - T 91 -11.4 -3.84017 | opp_overlap 234685, overlap 234682 TAATTTTAAAGATAA TAGGTAATAGATAATGGGTAGTAG GCG CTCTTACCAATTACCTATCACCTA TTAATAAAAACCCAT TERM 213 234685 - 234735 + T 75 -9.2 -3.14211 | opp_overlap 234685 234682 TAATTTTAAAGATAA TAGGTAATAGATAATGGGTAGTAG GCG CTCTTACCAATTACCTATCACCTA TTAATAAAAACCCAT TERM 214 234739 - 234772 + T 75 -5.3 -4.77036 | opp_overlap 234746, overlap 234741 234746 ACCTATCACCTATTA ATAAAAACCCATCCG CAAA TGGATGGGTTTTGGG TTTTTCGTGATAAAA TERM 215 234741 - 234770 + T 74 -10.1 -2.66962 | opp_overlap 234746, overlap 234739 234746 CTATCACCTATTAAT AAAAACCCATCCG CAAA TGGATGGGTTTTG GGTTTTTCGTGATAA TERM 216 234746 - 234765 + T 91 -10 -4.49644 | opp_overlap 234746, overlap 234741 234739 ACCTATTAATAAAAA CCCATCCG CAAA TGGATGGG TTTTGGGTTTTTCGT TERM 217 234765 - 234746 - T 100 -9.3 -5.14163 | opp_overlap 234746 234741 234739 ACCTATTAATAAAAA CCCATCC GCAAAT GGATGGG TTTTGGGTTTTTCGT Ava_0181 235070 - 234879 - | hypothetical protein TERM 218 236068 - 236056 - g 70 -7.7 -3.68222 | CTTTAATTTTAACAA GGGTT CCT AACCC TATAGAATTTGGTGT Ava_0182 235656 - 238184 + | phosphoglucomutase/phosphomannomutase alpha/beta/subunit Ava_0183 239629 - 238427 - | peptidase M23B Ava_0184 239911 - 241323 + | major facilitator transporter Ava_0185 242355 - 241405 - | acetyl-CoA carboxylase subunit beta Ava_0186 243218 - 243574 + | hypothetical protein TERM 219 243613 - 243583 - T 78 -9 -3.79849 | CAACTAGACTAAGAA TTGGCGATCGCCTA TGG TGAGCGATCGTCAA ACCAAACAAAGGCTC TERM 220 243680 - 243657 - T 100 -8.3 -5.63504 | opp_overlap 243655 243653 243649 243657 AACTTCATAAAAAAA GACAGAATA TCAATC TATTCTGTC TGTGTTAATATTTTT Ava_0187 244135 - 243809 - | thioredoxin TERM 221 244411 - 244376 - R 73 -6.2 -4.41348 | opp_overlap 244387, overlap 244379 GTTGCGCCAAATAAA TGATGTAGAGATGTTG CATG CAACGTCTCTACAGTA CAAAATAAATTGCAT TERM 222 244408 - 244379 - R 87 -12.3 -3.18452 | opp_overlap 244387, overlap 244376 GCGCCAAATAAATGA TGTAGAGATGTTG CATG CAACGTCTCTACA GTACAAAATAAATTG TERM 223 244546 - 244514 - R 71 -7.1 -3.9978 | gap 1, opp_overlap 244511, overlap 244517 TCATAAAATGAACAA TTAGCGCTCTA-GC AACAAA GCATAGAGCGCTGA GAGTATTTTAAGCTT TERM 224 244543 - 244517 - R 70 -8.8 -3.0274 | gap 1, opp_overlap 244511, overlap 244514 TAAAATGAACAATTA GCGCTCTA-GC AACAAA GCATAGAGCGC TGAGAGTATTTTAAG infC 244995 - 244561 - | translation initiation factor IF-3 TERM 225 245512 - 245523 + G 86 -3 -5.61881 | opp_overlap 245512 AATACAAAAAAACCA TAGA TGAT TCTA TTTTTGTTTTTGAGC Ava_0189 245295 - 245558 + | hypothetical protein Ava_0190 246035 - 245622 - | hypothetical protein TERM 226 245806 - 245837 + g 71 -4.5 -4.70534 | gap 1, opp_overlap 245806 245809, overlap 245809 ACAAAGCTTTCAAAG TCACGCATTACACA ATATC TGTGTAGCGCG-GA TTTTCTATCTATTTG TERM 227 245850 - 245869 + g 75 -5.8 -4.62471 | GGATTTTCTATCTAT TTGATGAA ATTT TTCGTCAA TTTTCTCTCTAGCTT TERM 228 246432 - 246418 - H 76 -3.5 -5.34309 | opp_overlap 246418, overlap 246428 ACGAGGAAAGAAAAA GAGCC ATAAG GACTC ATTTTGTGTCAATTG TERM 229 247122 - 247107 - g 88 -3.2 -5.80364 | opp_overlap 247107 ACGCCAACAAAAAAA CCGGAA CCTA TTCTGG TGGATTACGCAAACG Ava_0191 246710 - 247729 + | ABC transporter-like Ava_0192 247771 - 248658 + | hypothetical protein Ava_0193 248703 - 249092 + | hypothetical protein Ava_0194 249597 - 249160 - | Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen TERM 230 249685 - 249737 + G 100 -26 -3.11687 | opp_overlap 249681, overlap 249687 TCTTAGGAAACTGGG GATTGGGTATTGGTGACTGGGAAA AATGC TTTCCCAGTCACCAATACCCAGTA TTCAATCCTAATTAC TERM 231 249687 - 249735 + G 100 -28.6 -3.1154 | opp_overlap 249681, overlap 249685 TTAGGAAACTGGGGA TTGGGTATTGGTGACTGGGAAA AATGC TTTCCCAGTCACCAATACCCAG TATTCAATCCTAATT Ava_0195 249663 - 250169 + | hypothetical protein Ava_0196 250521 - 251996 + | cobyric acid synthase Ava_0197 252012 - 252251 + | ferredoxin Ava_0198 256571 - 252537 - | multi-sensor hybrid histidine kinase TERM 232 257101 - 257076 - R 86 -8.4 -4.46926 | opp_overlap 257095 GATTTTAGTAGAAAA TGCCGTGATA TTCCAC TATCACGACA TCCAAGGGTGGTCGC TERM 233 257321 - 257352 + r 71 -5.2 -4.59853 | gap 1, opp_overlap 257325 257327 257329 257331, overlap 257324 TTTCTCAGTTACTAC GTAATAGAGACGCAA TTG TCGCGTCTCTAC-AC TTTTTCAACGATTAA TERM 234 257349 - 257325 - R 100 -13.7 -3.10164 | opp_overlap 257324 257321, overlap 257327 257329 257331 TCAGTTACTACGTAA TAGAGACGCAA TTG TCGCGTCTCTA CACTTTTTCAACGAT TERM 235 257347 - 257327 - R 85 -11.9 -3.10975 | opp_overlap 257324 257321, overlap 257325 257329 257331 AGTTACTACGTAATA GAGACGCAA TTG TCGCGTCTC TACACTTTTTCAACG TERM 236 257345 - 257329 - R 71 -8.7 -3.11316 | opp_overlap 257324 257321, overlap 257327 257325 257331 TTACTACGTAATAGA GACGCAA TTG TCGCGTC TCTACACTTTTTCAA Ava_0199 257812 - 257357 - | cyclase/dehydrase TERM 237 257769 - 257747 - G 74 -9.2 -3.33969 | opp_overlap 257764 257766 TAAGTCAGCCCATAA CCCCCATA CTAAATC TATGGGGG CTTCCACTTCTACCT Ava_0200 259295 - 257856 - | zeta-carotene desaturase TERM 238 258985 - 258963 - G 89 -7.1 -5.02476 | gap 1, overlap 258965 AGAGGTGGTAAAAAA CGC-CTTCAA CCCG TTGAAGGGCG CACCTGTGAAGAAAC Ava_0201 259766 - 259590 - | helix-turn-helix protein, CopG TERM 239 260874 - 260892 + r 73 -2.4 -5.39755 | overlap 260876 ATTAAGTGGTCGTTG TATGGCTA TTA TATCCATG TTTTTTATACTTGTA Ava_0202 263338 - 261698 - | hypothetical protein TERM 240 262478 - 262461 - G 70 -2.7 -4.92314 | overlap 262474 ATGAAGCGACAAAAA CTTTCTA AAGC TAGGAAG ACAACAGCTGCTTCC TERM 241 263701 - 263689 - g 76 -10.5 -3.05935 | ATACTGTTGAGCGAA GCCGC TTT GCGGC AAGTAAAGTCCCTCC Ava_0203 263641 - 263997 + | HesB/YadR/YfhF Ava_0204 264076 - 264498 + | TPR repeat-containing protein TERM 242 264632 - 264579 - f 70 -6.7 -4.09864 | ACTCAGGTGTCAAAA GTCCACAGTCCACAGTCCAAGCTAG CCTT CAATTCTGGACTCTTGACTATGGAC AGCCCTGAAGCAAGA Ava_0205 264743 - 265000 + | hypothetical protein Ava_0206 265937 - 265017 - | hypothetical protein Ava_0207 267223 - 266087 - | hypothetical protein TERM 243 267666 - 267682 + G 71 -3 -4.94962 | gap 1 GACTATACCCAGGAT TTG-GCC GATT GGCGCAA TTTTGTTTAACTTGT Ava_0208 267637 - 268176 + | filament integrity protein Ava_0209 268225 - 269256 + | hypothetical protein Ava_0210 269291 - 270064 + | hypothetical protein Ava_0211 270725 - 270066 - | pentapeptide repeat-containing protein TERM 244 270131 - 270142 + g 78 -4.4 -5.2204 | TGGTATCGTGTAACT TAGC TAAA GCTA TTTTTGTTCCTTCTA TERM 245 271076 - 271041 - R 100 -12 -4.41348 | opp_overlap 271052, overlap 271044 GTTGCGCCAAATAAA TGATGTAGAGACGTTG TGTG CAACGTCTCTACAGTA CAGAATAAATGGCAT TERM 246 271073 - 271044 - R 100 -18.1 -3.18452 | opp_overlap 271052, overlap 271041 GCGCCAAATAAATGA TGTAGAGACGTTG TGTG CAACGTCTCTACA GTACAGAATAAATGG TERM 247 271262 - 271249 - R 81 -5.3 -5.14563 | TTTTTCACCAAAAAA TATGC TGTG GCATA TTCAGGTAACTGCCG Ava_0212 272594 - 271230 - | hypothetical protein Ava_0213 272922 - 272770 - | hypothetical protein TERM 248 273431 - 273448 + G 70 -2.7 -5.01732 | opp_overlap 273414 273431 TCGATATTACACCAA GCGAT CGCTCATC ATCGC TTTTTTAGGCGCATT Ava_0214 272988 - 274283 + | 4-aminobutyrate aminotransferase Ava_0215 275091 - 274312 - | hypothetical protein Ava_0216 275278 - 276219 + | hypothetical protein Ava_0217 276421 - 276179 - | hypothetical protein TERM 249 276409 - 276392 - G 90 -11.3 -3.6003 | opp_overlap 276392, overlap 276382 TAAACCATCTGTAAA GACGCGA TAAA TCGCGTC TTCTTCACCCAAGGA TERM 250 276392 - 276409 + g 90 -11.3 -3.61398 | opp_overlap 276382 276392 TAAACCATCTGTAAA GACGCGA TAAA TCGCGTC TTCTTCACCCAAGGA Ava_0218 277981 - 276464 - | hypothetical protein Ava_0219 278110 - 279801 + | Serine/threonine protein kinase TERM 251 280973 - 280960 - g 71 -3.1 -4.99134 | overlap 280961 280962 ACCCCAAAGGAAAAA CTGGT TGAT ACCAA CCGCCGCATTCTTAT TERM 252 281610 - 281633 + G 88 -6.6 -5.14163 | overlap 281625 AAACAGTCAGTGGCA CTCTCCAGCC TGCT GGCGGTAGAG TTTTTATTGCTGACT Ava_0220 279866 - 281974 + | Serine/threonine protein kinase TERM 253 282131 - 282152 + T 74 -10.1 -2.70774 | opp_overlap 282146 282147, overlap 282130 282147 TTTTGATCCCCCCTA ACCCCCCTT AAAA AAGGGGGGA ATTATAATTAAAGTC TERM 254 282185 - 282165 - T 86 -9.7 -4.04295 | opp_overlap 282147 282166, overlap 282147 282146 282166 GGAATTATAATTAAA GTCCCCCTT TTG AAGGGGGAT TTAGGGGGATCGAAC TERM 255 282166 - 282184 + T 100 -13.2 -3.54424 | opp_overlap 282147 282146 282166 282165, overlap 282147 GAATTATAATTAAAG TCCCCCTT TTG AAGGGGGA TTTAGGGGGATCGAA TERM 256 282184 - 282166 - T 93 -13.2 -3.01854 | opp_overlap 282147 282166, overlap 282147 282146 282165 GAATTATAATTAAAG TCCCCCTT TTG AAGGGGGA TTTAGGGGGATCGAA Ava_0221 283464 - 282262 - | hypothetical protein TERM 257 282638 - 282623 - G 75 -3.2 -5.12707 | CGAAAGGGGAAAAAA CCGAAG TATG CTTTGG CGGAATGATCTGGTG TERM 258 284314 - 284280 - g 100 -10.8 -4.64766 | overlap 284284 GCTATACGTCAAAAA TCAACGATCGCCGATT GTC AAACAGCGATCGCTAA TGCTCCTGTGGAAGC TERM 259 284310 - 284284 - g 95 -11.6 -3.81926 | overlap 284280 TACGTCAAAAATCAA CGATCGCCGATT GTC AAACAGCGATCG CTAATGCTCCTGTGG Ava_0222 283647 - 284342 + | hypothetical protein Ava_0223 285043 - 284381 - | hypothetical protein TERM 260 285210 - 285181 - R 81 -9.3 -3.80622 | ATACAAATTCAATAA TGGCCGTTGACAG TTAA CCGTCAACAGTCA ACAAACCATGCAAGT TERM 261 285435 - 285423 - R 70 -3.5 -4.95167 | CAATGAATAATAAAA TTTTA AAA TAAAA CGTGGAAAATTCTAC Ava_0224 286893 - 285895 - | diguanylate cyclase TERM 262 286116 - 286138 + g 71 -9.8 -2.71745 | overlap 286115 286118 GTTCACCTACTATCC GATTGAGGCG TTC CGCCACGATC ATTGCTTCTTCACCG Ava_0225 287883 - 287680 - | heavy metal transport/detoxification protein TERM 263 289588 - 289566 - g 77 -6.2 -4.64334 | overlap 289569 AATCGCCGAAGAAAA CAACCTCACC GTT GATGAGGACG ACTTTAATGTCGAGA TERM 264 289585 - 289569 - g 93 -8.7 -4.43307 | overlap 289566 CGCCGAAGAAAACAA CCTCACC GTT GATGAGG ACGACTTTAATGTCG alaS 288328 - 290970 + | alanyl-tRNA synthetase TERM 265 291207 - 291229 + T 100 -19.2 -3.53761 | opp_overlap 291199 AATGAAGGTTTTAAG CCTCTCCCCG ACG CGGGGAGAGG TTTGGAGAGGGGTTC Ava_0227 291735 - 291286 - | HNH endonuclease Ava_0228 292017 - 291751 - | hypothetical protein Ava_0229 294133 - 292064 - | tetratricopeptide TPR_3 Ava_0230 294669 - 294238 - | hypothetical protein Ava_0231 295655 - 294813 - | hypothetical protein Ava_0232 295974 - 295690 - | hypothetical protein Ava_0233 296260 - 296553 + | transposase TERM 266 297305 - 297292 - g 74 -6.7 -4.3129 | opp_overlap 297292 GATTTAGTAGGAAAA GTTCC CCCC GGAAC TAGTTGGCAAGCAAC Ava_0234 296554 - 297828 + | transposase IS4 TERM 267 298012 - 298044 + T 91 -9.9 -4.64844 | overlap 298013 298014 ATAAGGTGCGATATT TTTAACCCCTTCCCG TGT TGGAAAGGGGTTAGG TTTTATATATCTCAC TERM 268 298013 - 298043 + T 82 -11.2 -3.38183 | overlap 298012 298014 TAAGGTGCGATATTT TTAACCCCTTCCCG TGT TGGAAAGGGGTTAG GTTTTATATATCTCA TERM 269 298014 - 298042 + T 85 -12.5 -2.62187 | overlap 298013 298012 AAGGTGCGATATTTT TAACCCCTTCCCG TGT TGGAAAGGGGTTA GGTTTTATATATCTC TERM 270 298163 - 298132 - T 76 -5.1 -4.93968 | gap 1, overlap 298137 AGGGATAATCAAAAA CCAC-ACGACCGCC TGGCC GCCAGTCGCAGTGG ATGAAACCTCGGTGC Ava_0235 298882 - 298115 - | hypothetical protein Ava_0236 299443 - 299931 + | hypothetical protein Ava_0237 299970 - 300206 + | hypothetical protein TERM 271 302004 - 301953 - g 100 -13.2 -3.65294 | gap 1, opp_overlap 301963, overlap 301962 TGCTACATAAAGTAA GTGAGAGTAGGGGTATAGGGGAAAA AAA TTCTCCCCCAT-CCCCTAGCTTCAC AGATTGGCGCACTAT TERM 272 301995 - 301962 - g 93 -13.3 -2.67477 | gap 1, opp_overlap 301963, overlap 301953 AAGTAAGTGAGAGTA GGGGTATAGGGGAAAA AAA TTCTCCCCCAT-CCCC TAGCTTCACAGATTG Ava_0238 300431 - 305320 + | multi-component transcriptional regulator Ava_0239 305373 - 305771 + | response regulator receiver domain-containing protein Ava_0240 311969 - 305820 - | hypothetical protein TERM 273 307366 - 307385 + g 70 -3.5 -4.89009 | opp_overlap 307366 307367, overlap 307367 GCGTAACTAAAACTA GCTGTGG CTGATT CCACAGG TTTTTGGTTGAGTGT TERM 274 310073 - 310051 - G 74 -10.6 -2.62983 | GCTAGGCGGACATTA TTCGCCACCA ACT TGGCGGCAAA GGCTTGATCTTGCAG TERM 275 310769 - 310802 + g 71 -8.2 -3.56325 | opp_overlap 310769 TACCTGAGAGAATAG GCTGATTTGCGGCT CCTACC ACCTGCAAATCGGC TTGTAATTGTCCAGC Ava_0241 312306 - 312740 + | hypothetical protein TERM 276 313020 - 313035 + G 74 -6.1 -4.45115 | GACAGCCGATCGCCT GCGTC AAGGAG GACGC TTGTTTTATGTTGGT murQ 312832 - 313755 + | N-acetylmuramic acid-6-phosphate etherase TERM 277 313790 - 313840 + F 81 -8.5 -4.28375 | opp_overlap 313797 GGTCAGTTGTCATTA GTCAATAGTCCATAGTCAAAAAT CTTGC AATGTTGACTATTGACCATTGAC TTTTAAGTATATTCG TERM 278 313870 - 313901 + F 91 -11.8 -4.08557 | opp_overlap 313878 313879 GCTAATTTGTTGTCA TCTACCAACCTTTT GCGT AAAAAGTTGGTAGA TTATTATTTGAAGCC TERM 279 313997 - 313975 - f 100 -15.6 -3.53761 | overlap 313963 GAACCCCTCTCCAAA CCTCTCCCCG ACG CGGAGAGAGG CTTAAAACTCTGATT TERM 280 314034 - 314068 + F 100 -15.8 -3.19192 | opp_overlap 314033 TACTCAGTTATAGAT TTTCAGCCCCTTCCCT TGT AGGGAAGGGGTTGGGG TTAGGTTCCGTCGAA TERM 281 314386 - 314409 + G 75 -5.2 -4.75174 | opp_overlap 314386 TTTTCGGGAAAAACG GCCCTATGGG GAAA CTGATGGGGC TTTTTGACTTCAGTA Ava_0243 314175 - 315980 + | molybdate ABC transporter permease Ava_0244 316078 - 317271 + | major facilitator transporter Ava_0245 317599 - 317336 - | hypothetical protein Ava_0246 317826 - 317596 - | hypothetical protein TERM 282 317915 - 317880 - R 85 -9.2 -4.18018 | opp_overlap 317880 317883, overlap 317883 CCTCTGCATTGAAAA TAAGATACCGGAATTC TCAA AAATCCAGGTATCTTA TTTCTCATCCCTAAG TERM 283 317880 - 317915 + r 71 -7.1 -3.97947 | gap 1, opp_overlap 317880 317883, overlap 317883 CCTCTGCATTGAAAA TAAGATACC-GGAATT CTCAA AAATCCAGGTATCTTA TTTCTCATCCCTAAG TERM 284 317912 - 317883 - R 73 -6.5 -4.21812 | opp_overlap 317880 317883, overlap 317880 CTGCATTGAAAATAA GATACCGGAATTC TCAA AAATCCAGGTATC TTATTTCTCATCCCT aspS 319770 - 317926 - | aspartyl-tRNA synthetase Ava_0248 320069 - 319875 - | hypothetical protein Ava_0249 320350 - 320120 - | hypothetical protein Ava_0250 320586 - 320347 - | hypothetical protein TERM 285 320948 - 320962 + r 93 -12.8 -3.30124 | overlap 320931 TGAGCCAGCGCGTTG CGGGGG TTC CCCCCG TTGTAGCGACTGGCG TERM 286 321087 - 321072 - R 100 -10.4 -5.55664 | opp_overlap 321072 CCATCATTAAAAAAA GTCCGC AAAG GCGGAC TTTAAAATCACCTAA TERM 287 321072 - 321087 + r 82 -10.4 -3.60627 | opp_overlap 321072 CCATCATTAAAAAAA GTCCGC AAAG GCGGAC TTTAAAATCACCTAA Ava_0251 323565 - 321106 - | hypothetical protein TERM 288 322712 - 322699 - G 71 -4.5 -4.67943 | opp_overlap 322699 GTTGAAGACATAAAA CACGC GATC GCGTA TTCCTCCATTTTGCC TERM 289 323776 - 323765 - H 70 -3 -5.15167 | overlap 323759 GATGATCAATAAAAA TCAT TCTT ATGA GCATTATCGTCTTCG Ava_0252 323773 - 324696 + | ribokinase Ava_0253 324795 - 325400 + | hypothetical protein Ava_0254 325570 - 327417 + | von Willebrand factor, type A TERM 290 328187 - 328176 - g 73 -3.6 -5.03145 | GAACCTTTGAAAAAA GGCA TTCT CGCC AGGATTCCCACCTGA Ava_0255 327810 - 328202 + | hypothetical protein Ava_0256 328205 - 328942 + | cobalt-precorrin-6x reductase Ava_0257 329981 - 328980 - | cyanophycin synthetase-like TERM 291 330186 - 330170 - H 83 -9.5 -3.83816 | opp_overlap 330165, overlap 330173 AGAAATTAACTCAAA CAATCTC AGC GAGATTG AATGATTATTCTATA TERM 292 330592 - 330557 - H 100 -9.2 -5.69473 | opp_overlap 330556 330557, overlap 330559 CAGATCATAAAAAAA GAGTTAGTAAATCTCT GCTC AGATATTTACTAACAC CTTACTGAAACTTTA TERM 293 330557 - 330592 + H 71 -9.2 -2.50307 | opp_overlap 330557 330559, overlap 330556 CAGATCATAAAAAAA GAGTTAGTAAATCTCT GCTC AGATATTTACTAACAC CTTACTGAAACTTTA TERM 294 330590 - 330559 - H 95 -10.4 -4.47611 | opp_overlap 330557 330556, overlap 330557 GATCATAAAAAAAGA GTTAGTAAATCTCT GCTC AGATATTTACTAAC ACCTTACTGAAACTT Ava_0258 330624 - 330860 + | hypothetical protein TERM 295 331646 - 331673 + G 71 -9.2 -3.03798 | gap 1, overlap 331645 ACTTAACTTCACTAC TGCGGCTAC-TCG TGG TGATGTGGCCGCA ATTATTTATCAAGCT Ava_0259 331137 - 333146 + | hypothetical protein Ava_0260 333521 - 333255 - | hypothetical protein TERM 296 334176 - 334149 - H 85 -7.1 -5.02201 | opp_overlap 334147 AAAAGATGAGAAAAA TAGCCCAAGAT ATGTTA ATTTTGGGCTA GGTATTACAATATTT TERM 297 334769 - 334759 - g 71 -4 -4.81814 | opp_overlap 334759 ACTAGTACAAGAAAA CAAA TAT TTTG TTCTGCGGATAAAAA Ava_0261 334202 - 335224 + | transposase IS4 TERM 298 335559 - 335586 + G 72 -9.3 -3.15677 | overlap 335551 CGCCGCTTCCGTAAT TCTAGATACAG CACTTT CTGTATCTGGA TTAACTGATTATCTC TERM 299 335964 - 336017 + G 86 -11.8 -3.01791 | gap 1, opp_overlap 335975, overlap 335968 GCGATCGCTTCCTAT TCATCCCCAAACCATCGCCGTTG TCACTTCAC CGACGGCGGCGGCTTGGGG-TGA TATTCAAAAAACCCT TERM 300 335968 - 336014 + G 93 -13.7 -2.73875 | opp_overlap 335975, overlap 335964 TCGCTTCCTATTCAT CCCCAAACCATCGCCGTTG TCACTTCAC CGACGGCGGCGGCTTGGGG TGATATTCAAAAAAC xseA 335485 - 336768 + | exodeoxyribonuclease VII large subunit Ava_0263 336783 - 337067 + | exodeoxyribonuclease VII small subunit TERM 301 337100 - 337065 - f 100 -12 -4.46514 | opp_overlap 337076, overlap 337068 ATTGAGCCAAAGAAA TGATGTAGAGACGTTG CATG CAACGTCTCTACAGTA CACAATAAAGTGCAT TERM 302 337097 - 337068 - f 100 -18.1 -3.19523 | opp_overlap 337076, overlap 337065 GAGCCAAAGAAATGA TGTAGAGACGTTG CATG CAACGTCTCTACA GTACACAATAAAGTG TERM 303 337351 - 337336 - f 72 -4 -5.04987 | opp_overlap 337328 AAGATTTTGAAAAAA TTCAGT ATTT ACCGAA AAATCTCAAAACTTA TERM 304 337443 - 337473 + F 70 -8.4 -3.41878 | opp_overlap 337443, overlap 337440 TATATATAAATTTAA TTATGCCTCTAGAT AAA ATCTGTGGGCATAA TTGTCGATTGCAAAA TERM 305 340004 - 339994 - g 75 -5.4 -4.81852 | TTACAACGAACAAAA CTCT TCT AGAG AGACAAGCCAGGTTA TERM 306 340098 - 340075 - g 75 -6 -4.73388 | opp_overlap 340081 340092, overlap 340092 AAGCCTTAGGAAAAA TAGGGACTGC TACT ACAGTACCTA GTACTGGGTTACAGT Ava_0264 337530 - 342569 + | hypothetical protein TERM 307 342579 - 342611 + F 100 -13.5 -5.31275 | opp_overlap 342572, overlap 342580 GCCTAAAGTTTGACA CTTGTAGGGTAGGCA AGA TGCCCACCCTACAAA TTTTTTGTAGTAAGG TERM 308 342580 - 342610 + F 100 -17 -3.78042 | opp_overlap 342572, overlap 342579 CCTAAAGTTTGACAC TTGTAGGGTAGGCA AGA TGCCCACCCTACAA ATTTTTTGTAGTAAG TERM 309 342670 - 342612 - f 80 -9 -3.89346 | opp_overlap 342622 342625, overlap 342572 342613 342625 TGCCCACCCTACAAA TTTTTTGTAGTAAGGACTTTAGTCCTGA TTT TGAGGACTGAAGTCCTCACCACGAAATT AAACTAAATCATTTC TERM 310 342669 - 342613 - f 86 -12.5 -2.93393 | opp_overlap 342622 342625, overlap 342572 342612 342625 GCCCACCCTACAAAT TTTTTGTAGTAAGGACTTTAGTCCTGA TTT TGAGGACTGAAGTCCTCACCACGAAAT TAAACTAAATCATTT TERM 311 342657 - 342625 - f 87 -12.1 -3.14463 | opp_overlap 342625 342622, overlap 342613 342612 AATTTTTTGTAGTAA GGACTTTAGTCCTGA TTT TGAGGACTGAAGTCC TCACCACGAAATTAA Ava_0265 342733 - 343419 + | hypothetical protein TERM 312 343885 - 343901 + G 73 -8.7 -3.44622 | overlap 343887 GAAACGGGAATTTGT CGCCAAC AGT GTTGGTG TTGGTTCTGCAACTG Ava_0266 343463 - 344443 + | hypothetical protein TERM 313 344581 - 344606 + G 79 -6.9 -4.58773 | opp_overlap 344581 AAGCACCTTTATATA CTTGAATCTAG GAAA CTAGATGCAGG TTTTAGTTTGGTAGA Ava_0267 344482 - 345159 + | hypothetical protein TERM 314 345411 - 345389 - f 78 -8.6 -3.6796 | opp_overlap 345389 AAGAGATGCCAAGAA GTCACAAAAA TGT TTTTTATGAC TTATATTTACCATCT Ava_0268 345546 - 346517 + | glycosyl transferase family protein Ava_0269 346535 - 347542 + | glycosyl transferase family protein Ava_0270 347535 - 348536 + | glycosyl transferase family protein Ava_0271 348559 - 349116 + | hypothetical protein Ava_0272 349149 - 349799 + | hypothetical protein Ava_0273 350049 - 350891 + | hypothetical protein TERM 315 350901 - 350937 + F 73 -9.6 -2.90723 | gap 1, overlap 350911 CGTTAATTTCAGGTA GGGCTAGGCAGTGCT TGTTACTT AGCACT-CTTAGCCC TGTAGTTAGCCGTAG Ava_0274 351037 - 351933 + | glycosyl transferase family protein TERM 316 353114 - 353102 - g 81 -4.1 -5.32599 | CATAAAATAGAAAAA TCCCT GCA AGAGA TGAAGCAGATATAGA Ava_0275 352376 - 353128 + | hypothetical protein TERM 317 353880 - 353894 + G 77 -8.6 -3.91352 | overlap 353892 TAAACGTTACAGTGG CGATGA AGG TCATCG TTTCATTAACGGTGT nusB 353317 - 353952 + | transcription antitermination protein NusB Ava_0277 354230 - 355870 + | signal recognition particle-docking protein FtsY TERM 318 356458 - 356422 - g 86 -10.1 -4.03888 | overlap 356424 CACGGACAACAATAA TAGTGCTGCGACAGATG TCA CACCAGTCGTAGCACTC AAAGAACTTGTGTCA TERM 319 356456 - 356424 - g 100 -12.7 -3.60364 | overlap 356422 CGGACAACAATAATA GTGCTGCGACAGATG TCA CACCAGTCGTAGCAC TCAAAGAACTTGTGT Ava_0278 356378 - 357769 + | Serine phosphatase Ava_0279 357886 - 358788 + | cell division protein FtsX TERM 320 359057 - 359079 + G 78 -5.6 -4.8543 | overlap 359035 TCCTTGGCAAGAACT GTGCTGTTTT TTG AAAATGGCGC TTTTTCTCAAGGTTC TERM 321 359202 - 359188 - g 70 -3.5 -4.86001 | overlap 359189 ATTATTTGATAAAAA CGGTC AGTTA GACCA AATTACTCTAATTCG Ava_0280 358853 - 359668 + | hypothetical protein Ava_0281 359744 - 360142 + | hypothetical protein Ava_0282 360220 - 360810 + | dephospho-CoA kinase Ava_0283 362210 - 360816 - | peptidase U62, modulator of DNA gyrase TERM 322 362555 - 362530 - R 93 -11.9 -3.737 | opp_overlap 362528 362526 362531 362534 CAATCCGTCATGAAA GCTGTTGACTG TTGG CGGTCAACAGC CAATCTGTATTTCAA Ava_0284 363058 - 362567 - | hypothetical protein TERM 323 362654 - 362642 - G 71 -3.4 -5.01732 | AACGTGTTCAAAAAA TTGG GATAT CCAA GGTAGAGCCATTAAA TERM 324 362708 - 362693 - G 73 -2.6 -5.19251 | TAACACCAACAAAAA TATAGA AATG CCTATA ATTTGGTCACGATTA TERM 325 364301 - 364288 - g 71 -3.1 -4.92239 | overlap 364289 CGAAAAACGCAAAAA CGAAC TAGT GTTCA TCGGTCGCAATTTAG TERM 326 364330 - 364350 + G 82 -8.3 -4.4078 | opp_overlap 364333 AGATGAAGCCCAACT CAAGCAAGA TTT TCTCGCTTG TTTTGCTTAAAAGAC Ava_0285 363389 - 364360 + | cobalamin synthesis protein/P47K Ava_0286 364353 - 365513 + | WD-40 repeat-containing protein Ava_0287 365592 - 365864 + | hypothetical protein TERM 327 365885 - 365911 + F 100 -16 -3.96068 | opp_overlap 365882, overlap 365889 AAAAGCATAAATTTT TAGAGGCACAGC ATT GCTGTGCCTTTA TTCTTATTGCACTCC TERM 328 365889 - 365907 + F 100 -14.6 -4.57882 | opp_overlap 365882, overlap 365885 GCATAAATTTTTAGA GGCACAGC ATT GCTGTGCC TTTATTCTTATTGCA Ava_0288 366134 - 367114 + | periplasmic solute binding protein Ava_0289 367351 - 367701 + | hypothetical protein TERM 329 367732 - 367761 + T 72 -9.3 -2.71712 | gap 1, opp_overlap 367732 367730 367734 367735 367737, overlap 367731 CTAGCTATGAAAATA CAGGAGGCAGTTGT TCA ACGACTGCC-CCAG ATTTGGAAACACAAA TERM 330 367759 - 367734 - T 70 -8.3 -3.45073 | gap 1, opp_overlap 367732 367731, overlap 367732 367730 367735 367737 AGCTATGAAAATACA GGAGGCAGTTGT TCA ACGACTGCC-CC AGATTTGGAAACACA TERM 331 367759 - 367735 - T 76 -10.7 -2.66321 | opp_overlap 367732 367731, overlap 367734 367732 367730 367737 GCTATGAAAATACAG GAGGCAGTTGT TCA ACGACTGCCCC AGATTTGGAAACACA TERM 332 367757 - 367737 - T 75 -9.7 -2.86656 | opp_overlap 367732 367731, overlap 367734 367735 367732 367730 TATGAAAATACAGGA GGCAGTTGT TCA ACGACTGCC CCAGATTTGGAAACA TERM 333 367906 - 367929 + T 88 -10.4 -3.87562 | opp_overlap 367915, overlap 367901 GGAAGTCCCTTATTA GGGTAACAAG AGTA TTTGTTACCC TTGTGTATTTTGTCT Ava_0290 368496 - 367948 - | pentapeptide repeat-containing protein Ava_0291 368704 - 369360 + | glutathione S-transferase-like protein Ava_0292 370979 - 369588 - | parallel beta-helix repeat-containing protein TERM 334 371581 - 371525 - R 78 -6.8 -4.65895 | overlap 371527 TTTCTGATCTAAAAA TAGGGTGTAAAGGTATGAGAGTCT AGGTGTTGA ACAATCTCATACTTTTACACCCTG GGAGAACAAAAAAGC TERM 335 371579 - 371527 - R 83 -9.4 -3.94812 | overlap 371525 TCTGATCTAAAAATA GGGTGTAAAGGTATGAGAGTCT AGGTGTTGA ACAATCTCATACTTTTACACCC TGGGAGAACAAAAAA Ava_0293 372771 - 371617 - | UDP-sulfoquinovose synthase TERM 336 372739 - 372720 - G 72 -6.4 -4.33928 | overlap 372721 GATTGGAAAGATAAA GTGCGGTT GCCC AACCGCAG TATCCATCGCCACCA TERM 337 372738 - 372721 - G 74 -9.9 -3.19634 | overlap 372720 ATTGGAAAGATAAAG TGCGGTT GCCC AACCGCA GTATCCATCGCCACC Ava_0294 373266 - 374255 + | protochlorophyllide oxidoreductase TERM 338 374290 - 374306 + T 75 -9.5 -3.17219 | overlap 374279 ACGGTTGATAGTTGA CAGTTGA TGG TCAACTG TTAATACCAATTCTC TERM 339 374377 - 374346 - T 100 -14.6 -4.22554 | opp_overlap 374355, overlap 374347 GCACCCAATAAATAA TTGTAGAGACGTTG CCTG CAACGTCTCTACAG TCCAGAATAAAGCAC TERM 340 374376 - 374347 - T 100 -18.1 -3.12809 | opp_overlap 374355, overlap 374346 CACCCAATAAATAAT TGTAGAGACGTTG CCTG CAACGTCTCTACA GTCCAGAATAAAGCA TERM 341 374492 - 374463 - T 93 -6.4 -5.88197 | opp_overlap 374463 374465, overlap 374465 CTAAACATAAAAAAA TTCCCACTCAAG TCAACG CTTGGGTGGGTA ATATTGAGTAGGTAC TERM 342 374465 - 374490 + T 84 -11.9 -2.76171 | opp_overlap 374465 374463, overlap 374463 AAACATAAAAAAATT CCCACTCAAGT CAAC GCTTGGGTGGG TAATATTGAGTAGGT TERM 343 374490 - 374465 - T 70 -9 -3.03847 | opp_overlap 374463 374465, overlap 374463 AAACATAAAAAAATT CCCACTCAAG TCAACG CTTGGGTGGG TAATATTGAGTAGGT dnaK 376439 - 374538 - | molecular chaperone DnaK TERM 344 375700 - 375717 + g 72 -7.7 -3.81279 | overlap 375699 GCTTGTTTGTCTTTG CGGAGGT CAAT ACCTTCG TCTTTTCTGAACTGT Ava_0296 376954 - 379467 + | peptidase U32 TERM 345 379601 - 379622 + T 78 -5.9 -4.86731 | CTTATATTCTTTGAA GGCTTTTAA ATAA TTAAATGCC TTTTCTTTAAAAACC TERM 346 379896 - 379881 - T 72 -7.6 -3.77906 | opp_overlap 379881 AACTGAAATATACAA GGCTAA AGTA TTAGCC TAATTGCATAGGGCT Ava_0297 380592 - 380167 - | hypothetical protein TERM 347 380799 - 380772 - R 81 -8.6 -4.1585 | gap 1, overlap 380777 380779 TCATAATCCTCAAAA CACTATACTTGAC GCT GTCAAGTA-AGCG ATTAAAAAAACTTAT TERM 348 380795 - 380777 - R 78 -10.4 -2.93891 | overlap 380772 380779 ATCCTCAAAACACTA TACTTGAC GCT GTCAAGTA AGCGATTAAAAAAAC TERM 349 380793 - 380779 - R 70 -8.6 -3.01785 | overlap 380777 380772 CCTCAAAACACTATA CTTGAC GCT GTCAAG TAAGCGATTAAAAAA TERM 350 380950 - 380914 - R 85 -3.6 -5.64421 | opp_overlap 380924, overlap 380924 ATGCCAAATAAAAAA GCCGGTAAACCTCGCA AAAAA TGCAAGTTTGCCCAGC TCTGTTTTTATAGTT TERM 351 381512 - 381481 - R 100 -13.3 -3.56325 | TTCTCACAATTATAA GGTAGTAGAAATA GCTATA TATTTCTACTACC CGACTACGATAACCT Ava_0298 382402 - 381704 - | hypothetical protein Ava_0299 382768 - 384063 + | C-terminal processing peptidase-2 TERM 352 384598 - 384619 + G 73 -5.9 -4.42386 | GTCCCCAACCCCAAT GGCTGAATT CACT AATTCAACC TTTTGTCAATCCAGA Ava_0300 384252 - 385220 + | glycosyl transferase family protein Ava_0301 385286 - 385981 + | two component LuxR family transcriptional regulator Ava_0302 386792 - 386511 - | hypothetical protein Ava_0303 387484 - 387840 + | NADH dehydrogenase I subunit M TERM 353 388969 - 388953 - g 76 -9.5 -3.53091 | opp_overlap 388946 388945 388952 388951 388967 ATTGGCTGTGGCAAA TTGCCAA TCT TTGGCAA CCTTTCAAGAGTGAA Ava_0304 388478 - 390754 + | protein serine/threonine phosphatase Ava_0305 391127 - 392704 + | FHA domain-containing protein Ava_0306 393041 - 393685 + | hypothetical protein Ava_0307 395279 - 393945 - | FHA domain-containing protein TERM 354 395724 - 395735 + H 76 -4.4 -5.08015 | AGTTCCTACATCCCA CATC CCTT GATG TTTATTTTTTAAATT TERM 355 396241 - 396266 + H 81 -4 -5.52384 | opp_overlap 396241 396244, overlap 396244 AGTATTTTACTTAAA CAACCGTAGT TCTCCC GCTACGGTTA TTTTTTTGCTAAAAG TERM 356 396244 - 396263 + H 75 -5.7 -4.8487 | opp_overlap 396244 396241, overlap 396241 ATTTTACTTAAACAA CCGTAGT TCTCCC GCTACGG TTATTTTTTTGCTAA TERM 357 396309 - 396293 - H 72 -3.7 -5.0707 | opp_overlap 396293 AAAGACAAAAAGAAA TCACGAT TGT ATCTTGA ATTTAACAATTTCCC Ava_0308 396394 - 396804 + | hypothetical protein TERM 358 396855 - 396827 - f 79 -11.1 -2.87136 | opp_overlap 396828 TTACTAATCACTATA GTCCCAGACTTAT CGA ACAAGTCTGGGAT TTTTTTTGAAACTTT TERM 359 396828 - 396854 + F 100 -12.4 -5.77853 | opp_overlap 396827 TACTAATCACTATAG TCCCAGACTTAT CGA ACAAGTCTGGGA TTTTTTTTGAAACTT TERM 360 397299 - 397289 - g 70 -5.4 -4.43714 | opp_overlap 397291, overlap 397291 ATAAATTAGAACAAA TTGC GCC GCAA GTGCGCTATGTCACC Ava_0309 396919 - 398346 + | hypothetical protein Ava_0310 398643 - 399404 + | hypothetical protein TERM 361 399447 - 399437 - f 70 -5.4 -4.43272 | ATTCAAAATTCAAAA TCTC TAC GAGA AGCAAGCTACAAAAT TERM 362 399481 - 399469 - f 82 -7.7 -4.4595 | opp_overlap 399478, overlap 399472 CTACAAAATTCAAAA TACCC TAC GGGTA GGCGTAAGCCTACGT Ava_0311 399517 - 400305 + | Short-chain dehydrogenase/reductase SDR Ava_0312 400903 - 400535 - | hypothetical protein TERM 363 401297 - 401278 - H 70 -8.6 -3.01712 | TGTTGGGTGTTAATA GTTGACAG TTAA CCGTCAAC CGTCAAAAAATTATA TERM 364 401463 - 401477 + H 84 -7.8 -4.59207 | opp_overlap 401446 401462 401463 GTTTGGTACCCAAAG CCTGCT ACT GGCAGG TTTTATCGTCTTTAT TERM 365 402309 - 402288 - g 70 -2.9 -5.00884 | AGTTGTTGCAAAAAA TGGGTTTTC GGGT GAATTCCCA GCATCAACTTTGCCA ligA 401525 - 403555 + | NAD-dependent DNA ligase LigA TERM 366 404445 - 404457 + F 70 -5.5 -4.49644 | opp_overlap 404430 404431 GGCGTTCTCGAAGAG TACCC GTA GGGTG TTTTGAATTTTTAAT Ava_0314 404547 - 408746 + | Signal transduction histidine kinase (STHK) with CheB and CheR activity Ava_0315 409755 - 408793 - | phosphoesterase, PA-phosphatase related TERM 367 409945 - 409935 - H 79 -8.2 -4.11295 | TTAAACCCATATAAA GCCC AGT GGGC AAGTTCAGCAGATGG Ava_0316 410094 - 412691 + | peptidase M1, membrane alanine aminopeptidase Ava_0317 413885 - 412794 - | hypothetical protein TERM 368 414169 - 414158 - H 70 -3 -5.2204 | TATAATTAATAAAAA GATA GAAA TATC TGGGCAGTTCAATAA TERM 369 415518 - 415488 - g 77 -10.6 -3.11289 | opp_overlap 415495 415501, overlap 415485 TTAACTTTAAAACCA TCACAGATCAGTTC TCG GAACTGATGTATGA GTATCCATTCCGAGT TERM 370 415495 - 415511 + G 71 -9.5 -2.9356 | opp_overlap 415488 415485, overlap 415501 TAAAACCATCACAGA TCAGTTC TCG GAACTGA TGTATGAGTATCCAT Ava_0318 414272 - 416050 + | hypothetical protein Ava_0319 416107 - 416484 + | hypothetical protein TERM 371 416536 - 416550 + F 85 -11.4 -3.4252 | GGAGCCAGTGCGTTG CGGAGG TTC CCTCCG TTGTAGTAACTGGCG Ava_0320 416997 - 417767 + | hypothetical protein Ava_0321 418746 - 417820 - | hypothetical protein Ava_0322 419752 - 418757 - | hypothetical protein Ava_0323 420768 - 419794 - | glycosyl transferase Ava_0324 421994 - 420792 - | glycosyl transferase, group 1 Ava_0325 424269 - 422029 - | ABC transporter, transmembrane region Ava_0326 425562 - 424366 - | glycosyl transferase, group 1 Ava_0327 425965 - 425735 - | hypothetical protein TERM 372 426996 - 426971 - g 77 -4.7 -4.98857 | overlap 426965 ACTGAATTACAAAAA CGCTTTGAC GAAGTTAA GACAAAGCG CAGTCAAGGAATAGC Ava_0328 426380 - 427153 + | Beta-lactamase-like TERM 373 427632 - 427622 - g 73 -5.4 -4.62069 | overlap 427607 TTGGCAGCTTAAAAA TTGC CAA GCAA GTTGGTGAAAACGAA rplI 427372 - 427830 + | 50S ribosomal protein L9 Ava_0330 427954 - 429306 + | DnaB helicase TERM 374 429375 - 429318 - T 75 -9.3 -3.26473 | opp_overlap 429327 429329, overlap 429320 429322 TTAAATGATGATGAA TACAGTCAACAGTCAACAGTCATGAGT TTTT ACCTTTGACTGTGGACTATTGACTATG GACTATTCCCCTACT TERM 375 429373 - 429320 - T 87 -11.9 -3.19138 | opp_overlap 429327 429329, overlap 429318 429322 AAATGATGATGAATA CAGTCAACAGTCAACAGTCATGAGT TTTT ACCTTTGACTGTGGACTATTGACTA TGGACTATTCCCCTA TERM 376 429371 - 429322 - T 87 -12.3 -3.14961 | opp_overlap 429327 429329, overlap 429320 429318 ATGATGATGAATACA GTCAACAGTCAACAGTCATGAGT TTTT ACCTTTGACTGTGGACTATTGAC TATGGACTATTCCCC Ava_0331 429883 - 429386 - | peptidylprolyl isomerase, FKBP-type Ava_0332 430315 - 429992 - | hypothetical protein Ava_0333 430446 - 430760 + | hypothetical protein Ava_0334 430840 - 431970 + | phospho-2-dehydro-3-deoxyheptonate aldolase TERM 377 432115 - 432151 + T 81 -7.3 -4.58395 | overlap 432117 432122 432124 TGTTCCTTGTTGTAA TTTTGTGGAGACGTTGC AAT GCAACGTCTCTATGGTG TTTTTAGAGGATGGA TERM 378 432117 - 432149 + T 93 -12.1 -3.90762 | overlap 432115 432122 432124 TTCCTTGTTGTAATT TTGTGGAGACGTTGC AAT GCAACGTCTCTATGG TGTTTTTAGAGGATG TERM 379 432122 - 432144 + T 100 -16.4 -3.05832 | overlap 432117 432115 432124 TGTTGTAATTTTGTG GAGACGTTGC AAT GCAACGTCTC TATGGTGTTTTTAGA TERM 380 432124 - 432142 + T 93 -13.2 -3.07414 | overlap 432122 432117 432115 TTGTAATTTTGTGGA GACGTTGC AAT GCAACGTC TCTATGGTGTTTTTA Ava_0335 434065 - 432155 - | cyanophycin synthetase TERM 381 433027 - 433037 + g 77 -4.6 -5.01553 | GACTATCTAAACGCG CTGC TTT GCGG TTTTCTTTCTGAATT TERM 382 434370 - 434312 - H 84 -11.3 -3.5697 | gap 2, opp_overlap 434314 434315, overlap 434302 434300 434310 434314 434315 ATACACCTAGAAATA TAGGTAGGGTGGGCAATACCCACCACA ACTATCA TACGGTGGGCATTGCTCACCCTAC--A GATACTTAGATATTT TERM 383 434370 - 434314 - H 100 -18.9 -3.3539 | opp_overlap 434314 434315, overlap 434302 434300 434310 434312 434315 ACACCTAGAAATATA GGTAGGGTGGGCAATACCCACCACA ACTATCA TACGGTGGGCATTGCTCACCCTACA GATACTTAGATATTT TERM 384 434369 - 434315 - H 100 -22.4 -2.60511 | opp_overlap 434315 434314, overlap 434300 434310 434312 434314 CACCTAGAAATATAG GTAGGGTGGGCAATACCCACCACA ACTATCA TACGGTGGGCATTGCTCACCCTAC AGATACTTAGATATT Ava_0336 434559 - 434786 + | hypothetical protein TERM 385 434888 - 434939 + F 95 -10.4 -4.47271 | gap 1, opp_overlap 434896 434898 434909, overlap 434892 TTTACTAAACTGCTA GTGAGATATACTATCCCCAAATTTC AGA GAAAAT-GGGGATAGTATACCTGGC TTTTACTTAGATTTA TERM 386 434892 - 434935 + F 84 -12 -2.80479 | gap 1, opp_overlap 434896 434898 434909, overlap 434888 CTAAACTGCTAGTGA GATATACTATCCCCAAATTTC AGA GAAAAT-GGGGATAGTATACC TGGCTTTTACTTAGA TERM 387 434931 - 434896 - f 82 -11.4 -2.91383 | gap 1, opp_overlap 434892 434888, overlap 434898 434909 ACTGCTAGTGAGATA TACTATCCCCAAATTTC AGA GAAAAT-GGGGATAGTA TACCTGGCTTTTACT TERM 388 434929 - 434898 - f 74 -9.6 -3.0094 | gap 1, opp_overlap 434892 434888, overlap 434896 434909 TGCTAGTGAGATATA CTATCCCCAAATTTC AGA GAAAAT-GGGGATAG TATACCTGGCTTTTA Ava_0337 435128 - 435994 + | cyanophycinase. Serine peptidase. MEROPS family S51 Ava_0338 436670 - 436092 - | thioredoxin-related Ava_0339 436810 - 437214 + | 4Fe-4S ferredoxin, iron-sulfur binding Ava_0340 438278 - 437211 - | hypothetical protein TERM 389 438009 - 437995 - G 78 -10 -3.4252 | opp_overlap 437995 437992 TTGTAGCTATGAGAA CCTGTG AAC CACAGG TAATTATCAGCATAA TERM 390 437995 - 438009 + g 72 -10 -2.83271 | opp_overlap 437995, overlap 437992 TTGTAGCTATGAGAA CCTGTG AAC CACAGG TAATTATCAGCATAA TERM 391 438730 - 438708 - g 75 -5.6 -4.68424 | GAAGCCATTCAAAAA CACTTTAAGA AAA CCTTGAAGTG GGAAAAAGCTGTTAA TERM 392 438981 - 438970 - g 79 -3 -5.38348 | opp_overlap 438970 AAAAAGAGCAAAAAA CTTT ACAA AAAG CTTTTGACGCTTTAG Ava_0341 438642 - 439610 + | CHAD Ava_0342 440273 - 439635 - | hypothetical protein Ava_0343 440866 - 441306 + | hypothetical protein Ava_0344 442696 - 441503 - | MltA Ava_0345 442979 - 443509 + | general secretion pathway protein H TERM 393 443557 - 443587 + F 89 -12 -3.3334 | CACATAATTTTCTGT GTTGGGTAGTGTTT TTA GGACATTACCCAAC TTCTGCGATCAACTT Ava_0346 443655 - 445874 + | TPR repeat-containing protein Ava_0347 446400 - 445924 - | hypothetical protein TERM 394 446599 - 446616 + r 76 -9.9 -3.05844 | opp_overlap 446574 446566 446562, overlap 446563 ACTTGTTGTTAGTAG TGAGGAC TTCA GTCCTCA TCTTAGAATCAGCAC Ava_0348 448334 - 446643 - | TPR repeat-containing protein TERM 395 447386 - 447373 - GR 70 -6.7 -4.06491 | TCAATTGTAGATAAA CCAGT TGTC ACTGG ATGTCCCCAAGCTAC Ava_0349 451438 - 448307 - | glycosyl transferase, group 1 TERM 396 451312 - 451326 + gr 76 -5.8 -4.68846 | opp_overlap 451311 451312 CTCCCGAAGATGAAC CAATTT CTA AAATTG TTTTAATTTCTTCAT Ava_0350 451872 - 451474 - | hypothetical protein Ava_0351 452389 - 452640 + | hypothetical protein Ava_0352 453391 - 452990 - | hypothetical protein Ava_0353 454809 - 453526 - | serine/threonine kinase protein TERM 397 454754 - 454772 + g 87 -5.3 -5.4756 | opp_overlap 454754, overlap 454741 GAGGAGTTTTCAAAG CACCATT GCTTG AGTGGTG TTTTTTGTTGCGGTT Ava_0354 456982 - 454940 - | protein serine/threonine phosphatase TERM 398 455652 - 455634 - G 73 -8.2 -3.64882 | overlap 455632 CCATCACAAAGAATA TACAAGCC ACG AGCTTGTA AAATGCGGTTTCTCG Ava_0355 458668 - 457289 - | PAS/PAC sensor Signal transduction histidine kinase Ava_0356 459423 - 458809 - | pseudouridine synthase, Rsu Ava_0357 459886 - 461259 + | thiamine biosynthesis protein ThiC TERM 399 461319 - 461348 + F 74 -9.3 -2.95942 | opp_overlap 461324, overlap 461324 CTTTTCAGCCCATAT AAAAACAGCCCTC TTTC GTGGGCTGTTTTG TAATTTCAATCTAAA TERM 400 461343 - 461324 - f 100 -9.2 -4.9792 | opp_overlap 461319 461324 CAGCCCATATAAAAA CAGCCCTC TTTC GTGGGCTG TTTTGTAATTTCAAT TERM 401 461324 - 461343 + F 91 -9.2 -4.62168 | opp_overlap 461324, overlap 461319 CAGCCCATATAAAAA CAGCCCTC TTTC GTGGGCTG TTTTGTAATTTCAAT TERM 402 461519 - 461547 + G 82 -4.8 -5.33405 | opp_overlap 461543, overlap 461543 ACACTCAGTATGTAT TTTTCTTTTAGT AAATG GTTAAAAGAAAA TTTTTCTTTAGTAGC Ava_0358 461513 - 462286 + | hypothetical protein Ava_0359 463345 - 462497 - | hypothetical protein TERM 403 463262 - 463250 - G 84 -6.2 -5.05079 | ATAATGATAGAAAAA GCCC AAGAG GGGC ATAATAGATGTAATA TERM 404 463388 - 463377 - H 74 -4.4 -4.93968 | ACTGAGAATTAAAAA GGTA CTAG TACC GCAAGGCGGAATTCA ddl 463721 - 464824 + | D-alanyl-alanine synthetase A TERM 405 464885 - 464862 - f 76 -4.7 -5.05037 | gap 1 CAACAGAAAAATAAA TTTTGTAGCC TAAAT GGC-ACAAAA AGACTACTAAAATAG Ava_0361 464980 - 465636 + | hypothetical protein TERM 406 468934 - 468946 + G 70 -5.5 -4.41348 | opp_overlap 468934 ACAAGTACGATTAGA GCGTG GTC TACGC TTTCTTTCGGAAACA TERM 407 469031 - 469019 - g 71 -9.1 -3.29461 | opp_overlap 469009 GAACGCTTGGCACAA CTGGC AGT GCCAG AGTTAGCTGATTGGT Ava_0362 467060 - 470614 + | PAS/PAC sensor hybrid histidine kinase TERM 408 470955 - 470926 - T 91 -11.5 -4.07568 | gap 1, opp_overlap 470927 470928, overlap 470927 CCTCTCTCTTGAAAA GTTCTGATCGGAGG AAA CCTCCGCTCAGA-C TTTTCGCTCCGACAC TERM 409 470955 - 470927 - T 83 -11.7 -3.04398 | opp_overlap 470927 470928, overlap 470926 CTCTCTCTTGAAAAG TTCTGATCGGAGG AAA CCTCCGCTCAGAC TTTTCGCTCCGACAC TERM 410 470927 - 470955 + T 91 -11.7 -4.18018 | opp_overlap 470926 470927, overlap 470928 CTCTCTCTTGAAAAG TTCTGATCGGAGG AAA CCTCCGCTCAGAC TTTTCGCTCCGACAC TERM 411 470928 - 470954 + T 100 -15.2 -3.10597 | opp_overlap 470926 470927, overlap 470927 TCTCTCTTGAAAAGT TCTGATCGGAGG AAA CCTCCGCTCAGA CTTTTCGCTCCGACA Ava_0363 472667 - 471099 - | transposase IS4 TERM 412 471622 - 471635 + g 74 -6.7 -4.3129 | opp_overlap 471622 GTTGCTTGCCAACTA GTTCC GGGG GGAAC TTTTCCTACTAAATC TERM 413 472836 - 472812 - R 72 -9.3 -2.72511 | opp_overlap 472801 472814, overlap 472811 TCCACTGTTCCAAAC TCTTGAGGGGC TTA ACCCCTCAATA ATTCGCCAACAGTAT TERM 414 472814 - 472834 + r 78 -11.2 -2.71011 | opp_overlap 472812 472811, overlap 472801 CACTGTTCCAAACTC TTGAGGGG CTTAA CCCCTCAA TAATTCGCCAACAGT Ava_0364 473388 - 472912 - | hypothetical protein TERM 415 472978 - 473000 + g 71 -4 -4.86731 | TTCCCCTAACTGTTC CGCCAGAGTT TTT AACCCCGGTG TTTTCTTTGCAGCCG TERM 416 473895 - 473950 + H 84 -7.6 -4.58395 | gap 1, opp_overlap 473894, overlap 473898 CAATGTGAATTATAG GTA-GGGTGGGCAATGCCCACCAAAAC CAG GATATGGTGAGCATTGCCTACAGATAC TTTTTAAAAGATGGG TERM 417 473898 - 473946 + H 71 -9.5 -2.53903 | opp_overlap 473894, overlap 473895 TGTGAATTATAGGTA GGGTGGGCAATGCCCACCAAAAC CAG GATATGGTGAGCATTGCCTACAG ATACTTTTTAAAAGA TERM 418 474593 - 474605 + G 70 -7.7 -3.59247 | opp_overlap 474590, overlap 474592 CTTGATAATAATGGT CATGG AAC CCATG TTTCCGGGATTATTG Ava_0365 474080 - 475543 + | peptidase S8 and S53, subtilisin, kexin, sedolisin TERM 419 475636 - 475653 + T 76 -6.3 -4.57882 | opp_overlap 475636 475638 AATGACTCATATACA GACGTTG TATG TAACGTC TTTATTCTTCTTCAG Ava_0366 476017 - 475655 - | hypothetical protein TERM 420 476304 - 476328 + H 73 -7.1 -4.07687 | opp_overlap 476319 476320 TTCTGCTAACTGTCG CCTACCTCC TGACAAT GGCGGTAGG TTTTCCCGCCCACCT TERM 421 476475 - 476439 - H 78 -9.7 -3.2963 | opp_overlap 476443 476446, overlap 476443 ATTAGTTTCCTAGAA GAAATAAGCCACATA TTTGATT TATGTGCCTTATTTC TGTCACTAATTGGGC Ava_0367 476497 - 476694 + | Mn-containing catalase-like TERM 422 476708 - 476728 + T 77 -10.4 -2.86539 | opp_overlap 476708, overlap 476705 476727 GAATAATCAGCCAAA CCGGAGGC GGATA GTCTCCGG TGGTTGTACCTTGAG TERM 423 476728 - 476708 - T 74 -8.2 -3.74056 | opp_overlap 476708 476705 476727 GAATAATCAGCCAAA CCGGAGGC GGATA GTCTCCGG TGGTTGTACCTTGAG TERM 424 476795 - 476823 + T 71 -5.2 -4.63218 | gap 1 ATTCTTGGTGTACTT CGCGGTG-GGAGT TGTG ACCCCTCACCCCG TTTTCTTACCCCACG TERM 425 476879 - 476856 - T 100 -9.6 -4.78933 | TTAAAATAGAGAAAA CGACCACAGT GATT ACCGTGATCG TAGACGAATTAACTA TERM 426 476937 - 476950 + T 100 -9.5 -5.81032 | overlap 476938 CGTCTATTACCCTAT CCCCC AAAA GGGGG TTTTTTTTGGGGTTA Ava_0368 478591 - 477080 - | amine oxidase TERM 427 479332 - 479346 + G 72 -6.4 -4.29396 | CCGGAACTAACACCT TACCCG CAA TGGGTA TTTTCGTGACTGGTT Ava_0369 478887 - 479510 + | exopolysaccharide synthesis, ExoD TERM 428 479582 - 479551 - T 90 -3.6 -5.80951 | gap 1, overlap 479553 ATTCAAAATAAAAAA GTGCTGAA-GCGCGG TAG CAGGGCATTCAGCCC CTAGTCCCCAATCCC Ava_0370 482834 - 479610 - | phosphorylase kinase alphabeta TERM 429 479727 - 479688 - G 100 -11.5 -4.17425 | AGAAGTATTGTAAAA CGATCGCCACGCTGAAG CCTTAT CCTCATCATAGCGATCG CCCCGTTCTGGATGT TERM 430 483012 - 483033 + r 91 -11.7 -4.32804 | opp_overlap 483016 AGGATGATTCTTACA TGAATAGGC GATC GCCTATTCA TTTTCCGTTGCTTGT Ava_0371 483611 - 483027 - | hypothetical protein TERM 431 484334 - 484370 + G 72 -8 -3.745 | gap 1, overlap 484332 ATGACTTTATTCCTT CCGTAGCCAGACAGTTT ATTC AATCTGGCTGGC-GCGG TGTTTTGGTAGATGC Ava_0372 484012 - 485016 + | hypothetical protein Ava_0373 485638 - 485084 - | hypothetical protein Ava_0374 486907 - 485684 - | type II secretion system protein TERM 432 486348 - 486322 - G 74 -4.5 -4.75404 | AAATCTTAGCAAAAA TGGGGATAA GAAAAACAG TCATCCCCA CGAAAATGGCGGTTG TERM 433 487004 - 486965 - R 100 -15.6 -5.18355 | opp_overlap 486965 GTCAAAAATCAAAAA TAGTTATTATTTATTATT TCTG AATAATAAATAATAACTA TTTTTTAGTGTGCTT TERM 434 486965 - 487004 + r 100 -15.6 -5.2422 | opp_overlap 486965 GTCAAAAATCAAAAA TAGTTATTATTTATTATT TCTG AATAATAAATAATAACTA TTTTTTAGTGTGCTT Ava_0375 488127 - 487009 - | pilus retraction protein PilT TERM 435 487549 - 487561 + g 70 -7.7 -3.57309 | opp_overlap 487548 ATCTTCCCGTAAAGC CGCTT TTA AAGCG TTTGCAAAACTTTTG Ava_0376 490187 - 488175 - | type II secretion system protein E TERM 436 489326 - 489352 + g 90 -5.8 -5.47218 | opp_overlap 489330, overlap 489329 489330 AATTGGAGATAATTT TAAATCTGGCTG TTA CAGCCGGAATAA TTTTTTTCGGTAAGG TERM 437 489348 - 489330 - G 75 -8.8 -3.70811 | opp_overlap 489329 489326 489330 GGAGATAATTTTAAA TCTGGCTG TTA CAGCCGGA ATAATTTTTTTCGGT TERM 438 489330 - 489348 + g 76 -11 -2.69859 | opp_overlap 489330, overlap 489329 489326 GGAGATAATTTTAAA TCTGGCTG TTA CAGCCGGA ATAATTTTTTTCGGT TERM 439 490765 - 490747 - g 70 -7.5 -3.89614 | GGCAATCCCCACAAA TGTAGTG GGAGA CACTACA GCTACAGAAGATAAT Ava_0377 490595 - 491341 + | GrpE protein TERM 440 493112 - 493094 - g 72 -6.1 -4.39998 | CAGGCAGAGAACAAA GTATTAG AATTA CTAATAC TGGTGGATTAAGTAC dnaK 491617 - 493578 + | molecular chaperone DnaK TERM 441 493795 - 493814 + F 84 -10 -3.80573 | overlap 493790 AATCGTGCGGCTAGC CCCTCTAG TTCA CTAGGGGG TTTCCTCGTAGTACG TERM 442 494441 - 494425 - g 70 -7.9 -3.59653 | ACGCAGCAAAGAAGA CGCGGTG GGC CAGCGCG GGGTGATGATTTACG Ava_0379 494089 - 495219 + | heat shock protein DnaJ TERM 443 495314 - 495303 - g 70 -5.8 -4.36914 | opp_overlap 495294 TTCGTGCGGACAAAA CTCC GTTT GGAG AAAATGCCCCCAGGA Ava_0380 495219 - 495476 + | SirA-like TERM 444 495970 - 495982 + G 76 -7.7 -4.21438 | TCGCCTATTAGCTTG GGGTT ATC AACCC TTATTTATTAGCGTC Ava_0381 495473 - 496585 + | ribosome-associated GTPase Ava_0382 496720 - 498309 + | glycoside hydrolase family protein TERM 445 498357 - 498389 + T 81 -8.6 -4.07868 | gap 1, opp_overlap 498357 498362, overlap 498362 TTTTATCATGAAAAG CAAAACCCCCAA-CA TCAA TGATTGGGGGTTTTA TTTGTATGAGTGTAA TERM 446 498389 - 498357 - T 80 -10.8 -3.18024 | gap 1, opp_overlap 498357 498362, overlap 498362 TTTTATCATGAAAAG CAAAACCCCCAA-CA TCAA TGATTGGGGGTTTTA TTTGTATGAGTGTAA TERM 447 498362 - 498384 + T 95 -8.5 -5.05113 | gap 1, opp_overlap 498357 498362, overlap 498357 TCATGAAAAGCAAAA CCCCCAA-CA TCAA TGATTGGGGG TTTTATTTGTATGAG TERM 448 498384 - 498362 - T 88 -8.5 -4.70319 | gap 1, opp_overlap 498362 498357, overlap 498357 TCATGAAAAGCAAAA CCCCCAA-CA TCAA TGATTGGGGG TTTTATTTGTATGAG Ava_0383 498644 - 498417 - | hypothetical protein TERM 449 498542 - 498555 + g 80 -4.5 -5.1523 | CAGAACGCCAGTTAC GCTCA TGGA TGGGC TTTTTCTGTTCTCCC TERM 450 498867 - 498850 - R 100 -11.3 -5.47431 | opp_overlap 498863 TTAAGACATAAAAAA GACAGGC GATC GCCTGTC TGAAAAGTATTGATT Ava_0384 499848 - 498895 - | apocytochrome f TERM 451 499995 - 499937 - R 77 -9.7 -3.1577 | AGTCAAGAGTCAATA GTCAGTGGTCAGTGGTCAGTGGTCAGT GGCAA ATTCACAACTAACAACTGACTACTGAC ACAGAACGAAATCAT Ava_0385 500549 - 500010 - | cytochrome b6-f complex iron-sulfur subunit TERM 452 500943 - 500925 - g 71 -9 -3.29591 | opp_overlap 500927 ATGAGTGAAACCGAA TATCAAGA GCA TCTTGATA GTGTCGCCAATTACC Ava_0386 500778 - 501086 + | hypothetical protein Ava_0387 502144 - 501350 - | Sec-independent protein translocase TatC Ava_0388 502527 - 502784 + | hypothetical protein TERM 453 503038 - 503023 - T 72 -7.6 -3.65671 | overlap 503013 GACAAGTAGATATAA CACCTA CTTT TAGGTG ACAAAAAACTGGGTA Ava_0389 503572 - 503075 - | HNH endonuclease TERM 454 503274 - 503287 + g 70 -9.5 -2.80796 | overlap 503273 CAGCTATCACCACCG CCGCG CGAT CGCGG ATTTACATGATCCAA TERM 455 505121 - 505109 - g 93 -4.1 -5.85244 | overlap 505112 AAGGAAAAGAAAAAA TCACC GCC GATGA TTGGGCAGAAGAGTT alr 504016 - 505203 + | alanine racemase Ava_0391 506926 - 505598 - | hypothetical protein Ava_0392 508440 - 507151 - | hypothetical protein Ava_0393 509940 - 508594 - | hypothetical protein Ava_0394 510047 - 510367 + | hypothetical protein TERM 456 510377 - 510400 + F 74 -4.5 -4.93877 | opp_overlap 510377, overlap 510372 510385 AAATAGTTTCAAAAA TCTCCATCC CCCTGT GGCTGGGGA TTTTGTTTAGTAGAC TERM 457 510711 - 510698 - f 72 -3.8 -4.9792 | opp_overlap 510681 GAGTTTATACAAAAA CTCC GCTTTA GGAG ATACAGGTAACGAAA TERM 458 510840 - 510827 - f 74 -2.5 -5.40464 | overlap 510836 GATGATAAATAAAAA TAATA CACA TATTA AATTAATAGCTTTGA TERM 459 511335 - 511323 - f 70 -3.3 -5.00388 | overlap 511324 TAAAGCAAAAATAAA GGCCA TTT TGGCA GGTATTAGTAAATGA TERM 460 512008 - 512023 + G 91 -7.6 -4.74801 | opp_overlap 512007 GCACAAGGAATAAGT TCTCTG AATC CAGAGA TTTTTGGTAGAATTC Ava_0395 511486 - 512721 + | aminoglycoside phosphotransferase TERM 461 513353 - 513337 - g 84 -6.5 -5.03747 | opp_overlap 513339, overlap 513339 AAACCCGGTAAAAAA TCCGCCA CTG TGGGGGA ATCAGTAGCGATTTG Ava_0396 512869 - 513957 + | hypothetical protein TERM 462 513988 - 514008 + F 100 -11.9 -5.99154 | TAATATGATTTTGTA GAGCGGACT TCT AGTCTGCTC TTTTTTTATTTGGTA Ava_0397 514033 - 514479 + | thioesterase superfamily protein Ava_0398 515389 - 514535 - | histidine triad (HIT) protein Ava_0399 515470 - 516261 + | hypothetical protein Ava_0400 516377 - 516598 + | hypothetical protein Ava_0401 516834 - 516613 - | ferredoxin thioredoxin reductase, alpha chain Ava_0402 519180 - 517237 - | protein serine/threonine phosphatase Ava_0403 519447 - 519878 + | hypothetical protein TERM 463 519945 - 519980 + F 83 -11.4 -3.02144 | gap 1, overlap 519950 TGTCAAGGGTCAAGG GTCAACAGT-CAAAATC AAG GTTTTTGGACTGTTGAC TATTGACCGCCCTCA TERM 464 519990 - 520001 + F 89 -5.8 -5.28481 | GTTGACTATTGACCG CCCT CAGA AGGG TTTTTTGGTTCAGTG TERM 465 520791 - 520779 - g 70 -7.7 -3.60151 | GTTCTCAAAGCACAA GCTGA ACG TCAGC AACAAGTTCTCAGAG Ava_0404 520074 - 521042 + | SPFH domain-containing protein/band 7 family protein Ava_0405 521453 - 521049 - | ferric uptake regulator family protein TERM 466 521535 - 521514 - H 86 -6.6 -5.1963 | opp_overlap 521514 CCTAACTAATAAAAA CTCTACCC ACAAGG GGATAGAG TTTTGTCAGTAGTCA Ava_0406 521751 - 522029 + | phosphoribosylformylglycinamidine synthase subunit PurS Ava_0407 522165 - 522839 + | phosphoribosylformylglycinamidine synthase I TERM 467 522902 - 522872 - f 77 -8.3 -3.99315 | opp_overlap 522878, overlap 522878 ATCATAGTTAAACAA GATAGAGGCACAG TCAGG CTGTGCCTTTCTC CGTTGCTATTAAAGT TERM 468 522878 - 522896 + F 89 -11 -3.99228 | opp_overlap 522872 522878 GTTAAACAAGATAGA GGCACAGT CAG GCTGTGCC TTTCTCCGTTGCTAT TERM 469 522896 - 522878 - f 79 -10.3 -3.23555 | opp_overlap 522878, overlap 522872 GTTAAACAAGATAGA GGCACAG TCAGG CTGTGCC TTTCTCCGTTGCTAT TERM 470 523181 - 523169 - g 71 -3.3 -4.93877 | opp_overlap 523170, overlap 523170 TGTTATTAAACAAAA TGCTG AAA CAGCT TTAATCATTGCTATA TERM 471 523825 - 523790 - g 72 -9.2 -3.17075 | CGCTTTTGAAGTTAA TCTAGGTCAAACAACA GTTA TATTGTCTGACTTAGA AACAGCAGACTTGTG Ava_0408 522936 - 524852 + | hypothetical protein Ava_0409 526076 - 524913 - | hypothetical protein TERM 472 526019 - 525997 - G 79 -7.6 -4.36596 | opp_overlap 526018 TTGAGAACTAATAAA GGAGCGAACA GAG CGATCGCCCC AATTCTCGCTATTGG Ava_0410 526185 - 526580 + | hypothetical protein TERM 473 526715 - 526701 - f 84 -5 -5.33921 | overlap 526690 AAATCAATTAAAAAA TTGCCA CAA TGACAA AAAATCCTGCTATAA Ava_0411 526860 - 528278 + | cell envelope-like transcriptional attenuator Ava_0412 529245 - 528394 - | penicillin-binding protein, transpeptidase TERM 474 529204 - 529186 - G 71 -4.6 -4.58395 | GCTAGTTGTTAAAAA TATCACAA AGG TAGTGATA GCGACGATTATTGCC Ava_0413 529667 - 531814 + | PAS/PAC sensor Signal transduction histidine kinase TERM 475 531897 - 531876 - f 100 -9.5 -5.38047 | opp_overlap 531875 531876 TAGTTACACAAAAAA GCATGGAAT AATT ATCCCATGC CTTTCTGATAATCAA TERM 476 532346 - 532334 - f 74 -4.9 -4.74504 | ATTTTAACCTAAAAA TTTCT ATG AGAAA AGGTGAAAAACCAAG Ava_0414 532624 - 534003 + | nicotinate phosphoribosyltransferase nadD 534023 - 534625 + | nicotinic acid mononucleotide adenylyltransferase TERM 477 534770 - 534808 + GF 89 -11.8 -3.28712 | opp_overlap 534778 534783, overlap 534778 TTCCTGGTACTTTAG TGCGAGAAGGAGAGTCTT TAG AAGACGCTGCTTATCGCA TTATGGCAGAAAAAA Ava_0416 534586 - 535332 + | NUDIX hydrolase TERM 478 535497 - 535532 + F 71 -9 -3.27525 | gap 1, overlap 535491 AGAGAGGCTTTGAAT CTTGC-GCCCCTTCCCT GCA AGGGAAGGGGTTGGGGG TTAGGTTTGAGAGAA TERM 479 535768 - 535789 + G 78 -5.9 -4.82901 | overlap 535769 TGTGGCTATCCACCA CGGGATTTA TTAT TAAATCCCA TTTTTGTAGAGGCAA TERM 480 535769 - 535788 + G 76 -9.4 -3.49419 | overlap 535768 GTGGCTATCCACCAC GGGATTTA TTAT TAAATCCC ATTTTTGTAGAGGCA TERM 481 536222 - 536210 - g 74 -7.7 -3.93288 | GTTTAGGTAAGCAAA GCTTC CGA GAAGC AATGCTTAGACATAG TERM 482 537052 - 537034 - g 70 -7.4 -3.75332 | AGCGCCGAACTCAAA CCCGGTCA AGT TGACCAAG ATTCCCTACCCCCCT nadE 535621 - 537321 + | NAD synthetase TERM 483 537782 - 537815 + G 75 -9 -3.65812 | gap 1 GGATATGATGTAGTA CGCCAA-CCTTTGCT AGCTA AGCAAAGTATTGGCG TTGTCTTGCAGCAAA Ava_0418 537575 - 538477 + | ABC transporter-like Ava_0419 539159 - 538485 - | TPR repeat-containing protein TERM 484 539154 - 539186 + g 84 -2.8 -5.74288 | opp_overlap 539147 GAATGATATGTGTTT GTACACAGTAATTT TCCCT AAATTATAGTGAAC TTTTTTCTTGTTTAT Ava_0420 539422 - 539748 + | hypothetical protein Ava_0421 540108 - 540743 + | hypothetical protein TERM 485 540820 - 540845 + T 85 -11.9 -3.01684 | overlap 540822 AAATATTAATTTTCT TAGGGACGCAC TTTT GTACGTCCCTA TCTGTATAACTCATT TERM 486 540822 - 540843 + T 76 -10.1 -3.05993 | overlap 540820 ATATTAATTTTCTTA GGGACGCAC TTTT GTACGTCCC TATCTGTATAACTCA Ava_0422 541203 - 540943 - | hypothetical protein Ava_0423 541994 - 541311 - | transcriptional regulator Ava_0424 542220 - 543659 + | cysteine desulfurase activator complex subunit SufB Ava_0425 543735 - 544523 + | FeS assembly ATPase SufC TERM 487 545701 - 545687 - g 70 -5.6 -4.3208 | overlap 545689 GCCGACAACGTAAAA TGCGCC CAC GGTGCA ACCGTTAGCCAGTTA Ava_0426 544523 - 545887 + | FeS assembly protein SufD Ava_0427 545922 - 547184 + | cysteine desulphurases, SufS TERM 488 547185 - 547212 + F 75 -5.6 -4.83169 | gap 1, overlap 547190 547211 GGGATCTTTGGATGA TTGA-GGGTGGGC ATT GCCCACCTTTTGA TTTTTATGAAAAAAT TERM 489 547190 - 547206 + F 100 -13.7 -4.82678 | overlap 547185 CTTTGGATGATTGAG GGTGGGC ATT GCCCACC TTTTGATTTTTATGA TERM 490 547540 - 547527 - g 85 -2.4 -5.79595 | TTTCAAAAGAAAAAA CCAA TCAGAT TTGG TGAAATAGGTAGTGG Ava_0428 547218 - 547667 + | hypothetical protein Ava_0429 548916 - 547804 - | UDP-N-acetylglucosamine 2-epimerase Ava_0430 549944 - 548976 - | N-acetyl-gamma-glutamyl-phosphate reductase TERM 491 550078 - 550095 + H 72 -4.1 -4.90917 | overlap 550024 550080 TCTATCGCACTGACG CACCCTA CATT TAGGGTA TTTTTGATTACCTTT TERM 492 550080 - 550093 + H 70 -6.7 -4.06004 | overlap 550024 550078 TATCGCACTGACGCA CCCTA CATT TAGGG TATTTTTGATTACCT Ava_0431 550205 - 550390 + | hypothetical protein TERM 493 550403 - 550421 + T 70 -8.9 -3.08312 | TAAGTTTAGGGAATG TGGGGAA ATTTA TTCCCCA TTCACTAACTGCCTT Ava_0432 551721 - 550435 - | C-terminal processing peptidase-2 TERM 494 551407 - 551448 + g 70 -8.1 -3.63968 | gap 1 CTGCATATTCTTGAA CTCCTGAG-GGTCCATAAAC CGA GTGTATGGATCATTCAGGCG TTTGAGCATTTCCCG ispG 553149 - 551923 - | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase TERM 495 552604 - 552588 - G 76 -9.5 -3.57185 | overlap 552586 CGTAGGTAAATAACA TTCTCTC AGC GAGAGAA CCATGATTGACACCA TERM 496 553407 - 553372 - H 76 -10 -3.04263 | gap 1, overlap 553377 ACCCTACGGTCAATA GTCAATAGTCCAAAAAC CTT GATTTTG-ACTATTGAC AATTGACAAAAAAGC Ava_0434 553560 - 555584 + | Serine/threonine protein kinase TERM 497 555770 - 555741 - f 84 -11.6 -3.21806 | opp_overlap 555741 555741, overlap 555736 GGAAGTAAGATTCAA CGTAGAGACGTT CCATGC AACGTCTCTACA GTTTCAGGAGAGGTA TERM 498 555741 - 555770 + F 72 -9.4 -2.71924 | opp_overlap 555736 555741, overlap 555741 GGAAGTAAGATTCAA CGTAGAGACGTT CCATGC AACGTCTCTACA GTTTCAGGAGAGGTA TERM 499 555741 - 555771 + F 78 -9.2 -3.53444 | gap 1, opp_overlap 555736 555741, overlap 555741 GGAAGTAAGATTCAA C-GTAGAGACGTT CCATGC AACGTCTCTACAG TTTCAGGAGAGGTAC Ava_0435 555944 - 556423 + | Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen Ava_0436 556556 - 557182 + | hypothetical protein TERM 500 557751 - 557775 + G 72 -7.2 -3.91196 | opp_overlap 557770, overlap 557770 TTGGCAAAATTCCTC TCGATGTGCA AGCGA TGAACATCGA TTTGATGTCTCTGAC TERM 501 558322 - 558285 - g 74 -6.6 -4.38273 | gap 1, opp_overlap 558293 ATACAGCAGAAGAAA TTGATATAGTAGCGA AATATGCGA TCGCTACTAT-TCAA AGTTTACGTAAACAA Ava_0437 557186 - 558352 + | aromatic amino acid beta-eliminating lyase/threonine aldolase Ava_0438 559349 - 558378 - | peptidase S51, dipeptidase E TERM 502 559265 - 559284 + g 77 -10.8 -2.85351 | CCTCGACAGTGTTGC CCTGAAAC AAGA GTTTCAGG TATGCTGTAAGACGG Ava_0439 560701 - 559514 - | glycosyl transferase, group 1 TERM 503 561151 - 561169 + r 74 -10.2 -2.68381 | overlap 561150 561149 561160 561160 ATTTATATTTAAGCC CCTCTCCG CGT CGGAGCGG ATGTTTCCTCCGTTC TERM 504 561319 - 561275 - R 100 -14.8 -4.77157 | opp_overlap 561280 561283, overlap 561277 561280 TGAAGTGATTAAAAA TAC-AAGAATGTAGAAGGTACA TTC TGT-CCTTCTACATTCTTGGTA AGCATGAATTTAATT TERM 505 561316 - 561277 - R 100 -19 -3.9993 | gap 1, opp_overlap 561280 561283, overlap 561275 561280 AAGTGATTAAAAATA CAAGAATGTAGAAGGTACA TTC TGT-CCTTCTACATTCTTG GTAAGCATGAATTTA TERM 506 561280 - 561313 + r 100 -14.9 -3.15663 | gap 1, opp_overlap 561277 561275 561280, overlap 561283 TGATTAAAAATACAA GAATGTAGAAGGTACA TTC TGT-CCTTCTACATTC TTGGTAAGCATGAAT TERM 507 561313 - 561280 - R 100 -14.9 -4.11027 | gap 1, opp_overlap 561280 561283, overlap 561277 561275 TGATTAAAAATACAA GAATGTAGAAGGTACA TTC TGT-CCTTCTACATTC TTGGTAAGCATGAAT TERM 508 561283 - 561310 + r 88 -10.8 -3.72324 | gap 1, opp_overlap 561280 561277 561275, overlap 561280 TTAAAAATACAAGAA TGTAGAAGGTACA TTC TGT-CCTTCTACA TTCTTGGTAAGCATG Ava_0440 563242 - 561431 - | GTP-binding protein LepA TERM 509 563525 - 563545 + r 72 -8.3 -3.60098 | CCCTTTCGGCAGTTC CTTCTCCTT GCA GAGGAGAGG TTTGCCCTACACCCT Ava_0441 566454 - 563563 - | PEP-utilising enzyme, mobile region TERM 510 564240 - 564255 + g 73 -2.6 -5.1925 | gap 1 CAGTCCCCCGTTTGC GTT-TCG GGG CGACAAC TTTTTTGGCTTCTAA Ava_0442 567227 - 568177 + | hypothetical protein Ava_0443 568980 - 568366 - | hypothetical protein TERM 511 568421 - 568400 - G 78 -9.3 -3.5944 | ATCCACAGCGCCAAA CCGCCCCCG CGTC CACGGGCGG CAATAAAATCCTGTG TERM 512 568759 - 568770 + g 80 -3.6 -5.31059 | overlap 568758 TAAAATTATTCCCCC GCGT TTTT GCGC TTTTTTCGTTCCTGT TERM 513 569094 - 569076 - R 75 -7.4 -4.31549 | overlap 569073 569079 CAAAATTTAAAACAA TTATGGGC AAT GCCCATCA TACGAAATAGTAGGC TERM 514 569091 - 569079 - R 71 -9.1 -3.12253 | overlap 569076 569073 AATTTAAAACAATTA TGGGC AAT GCCCA TCATACGAAATAGTA TERM 515 569226 - 569212 - R 78 -3.6 -5.39755 | GATAATTATAAAAAA TTAACC GCC GATTAA TAATAGTAATTTGAG Ava_0444 570884 - 569295 - | XRE family transcriptional regulator TERM 516 569764 - 569784 + g 71 -7 -4.16943 | opp_overlap 569764 569783, overlap 569759 GGTTTAATTCCTAAA TGATTTAG TACTT CTAAATCA TTTTCAAATGTCCGC Ava_0445 571714 - 572007 + | 4Fe-4S ferredoxin, iron-sulfur binding TERM 517 572232 - 572220 - f 70 -2.7 -5.2204 | GAGAATCAACAAAAA GTTCA CGG TAAAC AAACTCGTAAATCAC Ava_0446 572556 - 573530 + | cytochrome C oxidase subunit II, transmembrane region Ava_0447 573578 - 575257 + | cytochrome c oxidase, subunit I TERM 518 575297 - 575258 - f 100 -13.6 -3.16177 | gap 1 AGTGTACAGACCTAA CCCCCTAGCCCCCTTCCCT CGT AGGGAAGGGGGA-AGCAGG GAAAGCAGGGGGTGC Ava_0448 575458 - 576051 + | cytochrome c oxidase subunit III Ava_0449 576148 - 576633 + | hypothetical protein TERM 519 576665 - 576682 + F 72 -8.3 -3.57561 | overlap 576666 ATAGTGCATTCCTGA GCCGCCC CCGT GGGCGGG TTTCCCGACTTGAGG TERM 520 576666 - 576681 + F 81 -11.8 -2.74322 | overlap 576665 TAGTGCATTCCTGAG CCGCCC CCGT GGGCGG GTTTCCCGACTTGAG Ava_0450 576962 - 577573 + | cupin region TERM 521 577716 - 577676 - f 100 -14.7 -4.09805 | GGAGCAAGAATTAAA GCTACCCTGCGGGTACTCC TAC GGAGAACTCGTAGAGTAGC AAGCTATGGATAGGG TERM 522 577943 - 577958 + G 71 -3.2 -5.03314 | overlap 577944 AGAACCTTGGACTGT GGAACG TCTG CGTTCA TTTTTTGGCGATCGC TERM 523 577974 - 577988 + G 84 -10 -3.84246 | TTTTTTGGCGATCGC CCAGTC ACC GACTGG TTTAATCGTTCCGCG TERM 524 578072 - 578053 - g 81 -9.4 -3.83066 | AACTAGACGAGCAAA CAGCATTA CTTT TAATGCTG AGAGAGCCTTTATTA Ava_0451 577821 - 578336 + | nitrogenase-associated protein TERM 525 578371 - 578357 - T 75 -10 -2.89935 | overlap 578347 578345 AAACACTTGTAGAGA CGTAGC GGT GCTACG TCTCCAACTCCAACA Ava_0452 579362 - 578403 - | cysteine synthase Ava_0453 580356 - 580781 + | hypothetical protein Ava_0454 580861 - 581136 + | hypothetical protein Ava_0455 581139 - 581450 + | hypothetical protein TERM 526 581495 - 581451 - f 100 -15.3 -3.52192 | opp_overlap 581453 581458, overlap 581453 581458 CGCAAGTCTAGATAA GATAAAATATCCCCGACCTCT TTA ACAAGTCGGGGATATTTTATT TCAATTTGTATGGAA TERM 527 581453 - 581493 + F 100 -15.7 -3.91402 | opp_overlap 581453 581451 581458, overlap 581458 CAAGTCTAGATAAGA TAAAATATCCCCGACCTCT TTA ACAAGTCGGGGATATTTTA TTTCAATTTGTATGG TERM 528 581493 - 581453 - f 100 -17.9 -3.33412 | opp_overlap 581453 581458, overlap 581451 581458 CAAGTCTAGATAAGA TAAAATATCCCCGACCTCT TTA ACAAGTCGGGGATATTTTA TTTCAATTTGTATGG TERM 529 581458 - 581488 + F 100 -11.2 -4.96468 | opp_overlap 581458 581453 581451, overlap 581453 CTAGATAAGATAAAA TATCCCCGACCTCT TTA ACAAGTCGGGGATA TTTTATTTCAATTTG TERM 530 581488 - 581458 - f 100 -13.4 -4.76963 | opp_overlap 581453 581458, overlap 581453 581451 CTAGATAAGATAAAA TATCCCCGACCTCT TTA ACAAGTCGGGGATA TTTTATTTCAATTTG TERM 531 581592 - 581570 - f 80 -2.1 -5.61913 | overlap 581580 AATAAATAGAAAAAA TAATACTGA ATTTG TCAACATTA TATGACAAAAATATG Ava_0456 581652 - 581987 + | hypothetical protein Ava_0457 582009 - 583010 + | luciferase-like Ava_0458 583003 - 583374 + | hypothetical protein TERM 532 583411 - 583432 + T 100 -7.3 -5.92399 | opp_overlap 583411 ATTAAATTTCAGTAA CCCAGTTTT TCCC AAGGCTGGG TTTTTTCTTTTATTC Ava_0459 584142 - 583456 - | hypothetical protein TERM 533 583852 - 583835 - G 71 -4.1 -4.83169 | opp_overlap 583834 583837 ACTTTCTTATAAAAA TAGGGGT CGAA ACCTCTA GCTTTCATTTCAATG TERM 534 584934 - 584951 + r 88 -11.3 -3.71255 | opp_overlap 584936 TAAACCATTTGTAGA GACGCGA TTAA TCGCGTC TTCTTGACTAATTAT Ava_0460 585599 - 585093 - | dinitrogenase iron-molybdenum cofactor biosynthesis Ava_0461 586038 - 586943 + | binding-protein dependent transport system inner membrane protein Ava_0462 589178 - 587109 - | prolyl oligopeptidase TERM 535 589792 - 589752 - g 86 -5.7 -5.28176 | gap 1, opp_overlap 589759, overlap 589753 589755 589759 CGTAGCTACAAAAAA GTAGATA-CCATGCTAAT TAAACT ATTAGCATGGTTATCCAA AAAGTTTGGTTCAGA TERM 536 589791 - 589753 - g 81 -9.2 -3.76182 | gap 1, opp_overlap 589759, overlap 589752 589755 589759 GTAGCTACAAAAAAG TAGATA-CCATGCTAAT TAAACT ATTAGCATGGTTATCCA AAAAGTTTGGTTCAG TERM 537 589789 - 589755 - g 76 -9.6 -3.45403 | gap 1, opp_overlap 589759, overlap 589753 589752 589759 AGCTACAAAAAAGTA GATA-CCATGCTAAT TAAACT ATTAGCATGGTTATC CAAAAAGTTTGGTTC TERM 538 589784 - 589759 - g 77 -10.6 -3.18764 | opp_overlap 589759, overlap 589755 589753 589752 ACAAAAAAGTAGATA CCATGCTAAT TAAACT ATTAGCATGG TTATCCAAAAAGTTT TERM 539 589759 - 589784 + G 78 -10.6 -3.2964 | opp_overlap 589755 589753 589752 589759 ACAAAAAAGTAGATA CCATGCTAAT TAAACT ATTAGCATGG TTATCCAAAAAGTTT Ava_0463 589398 - 589991 + | Crp/FNR family transcriptional regulator Ava_0464 590336 - 589998 - | hypothetical protein TERM 540 590765 - 590746 - H 79 -10.8 -3.02186 | opp_overlap 590745 590743 590742, overlap 590743 ACAGTTCAGAAACGA CTTTCTCC CAAA GGAGAAAG ATGATTTAATAAAAC Ava_0465 590811 - 592061 + | extracellular ligand-binding receptor Ava_0466 592154 - 593104 + | inner-membrane translocator TERM 541 593341 - 593315 - g 76 -9.6 -3.43848 | overlap 593313 ACATAGTCAACAATA CAGCAGTTTT TAGAACT AAAACTGCTG ATGGCATAGAACAAG Ava_0467 593116 - 593718 + | hypothetical protein Ava_0470 594665 - 595444 + | ABC transporter-like Ava_0471 595707 - 595426 - | hypothetical protein Ava_0472 596833 - 595763 - | hypothetical protein TERM 542 596915 - 596897 - H 83 -8.9 -4.29304 | opp_overlap 596893, overlap 596910 TCAGTATAACACAAA GCTAGCA AAAAA TGCTAGC AATGATTCTCTAGCG Ava_0473 597150 - 597932 + | ABC transporter-like TERM 543 598410 - 598399 - g 73 -5.8 -4.57073 | opp_overlap 598399 598401, overlap 598400 598401 GATTTTGCCGAAAAA GCCA GCAC TGGC TGTCTGATTATTCCT Ava_0474 598012 - 598848 + | dihydrodipicolinate reductase Ava_0475 598874 - 599557 + | hypothetical protein TERM 544 599661 - 599646 - T 71 -9 -3.28924 | TACTCCTGCGGAGAA CCCGTA CCCC TACGGG GAAGCAAGCTACGCG Ava_0476 600345 - 599725 - | precorrin-8X methylmutase Ava_0477 601266 - 600457 - | hypothetical protein Ava_0478 602060 - 601515 - | hypothetical protein Ava_0479 602495 - 602145 - | hypothetical protein Ava_0480 602956 - 602636 - | hypothetical protein Ava_0481 604099 - 603098 - | hypothetical protein TERM 545 603984 - 603953 - G 75 -7.4 -4.25056 | CAGTTCATCAAGAAA TAACTTACCGAC TTCTCTTT GACGGTAAGTTA CAACCTCGGCATGAC Ava_0482 604798 - 604139 - | hypothetical protein Ava_0483 605485 - 605222 - | LuxR family transcriptional regulator Ava_0484 606011 - 607252 + | hypothetical protein TERM 546 607335 - 607384 + T 95 -13.1 -3.30474 | opp_overlap 607332, overlap 607338 TTGCACAATCTATTG TGAGGCCTGTTAGCTGTTGAC CGTTGAGA GTCAACAGTTAACAGTCCTGA TTAGTAGTTATGCAA TERM 547 607338 - 607381 + T 100 -14.8 -2.82529 | opp_overlap 607332, overlap 607335 CACAATCTATTGTGA GGCCTGTTAGCTGTTGAC CGTTGAGA GTCAACAGTTAACAGTCC TGATTAGTAGTTATG Ava_0485 608095 - 607538 - | Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen Ava_0486 608485 - 608183 - | hypothetical protein TERM 548 608897 - 608884 - g 75 -5.3 -4.81644 | TAAAGAAAAGTAAAA TTCTG AAAT CAGAA AAAGATGATTTCCAG Ava_0487 608841 - 609302 + | hypothetical protein TERM 549 610204 - 610191 - g 85 -2.4 -5.82036 | opp_overlap 610198 AGAAGAAACAAAAAA CTTG ATACTG CAAG TTCACAATGAAGGTG Ava_0488 609400 - 610314 + | hypothetical protein Ava_0489 610301 - 611260 + | hypothetical protein Ava_0490 612466 - 611249 - | acetate kinase TERM 550 612012 - 612033 + g 77 -3.7 -5.10497 | gap 1, overlap 612013 GTATCAAACACTGCT ACTTGGG-GA ACA TCACCCAAGC TTTTTTCGATAGCTT Ava_0491 613044 - 612778 - | hypothetical protein Ava_0492 613227 - 613571 + | hypothetical protein TERM 551 613777 - 613832 + T 72 -7.9 -3.6471 | gap 1, opp_overlap 613780, overlap 613783 613786 TTGAAGTTGCACAAT CTATT-GTGAGGGCTGTTGACTGT CAGCAGTCA ACAGTTAACAGCCCTGATTAGTAG TTATGTAATTTAGGC TERM 552 613783 - 613825 + T 85 -11.5 -3.31931 | opp_overlap 613780, overlap 613777 613786 TTGCACAATCTATTG TGAGGGCTGTTGACTGT CAGCAGTCA ACAGTTAACAGCCCTGA TTAGTAGTTATGTAA TERM 553 613786 - 613822 + T 90 -13.2 -2.82529 | opp_overlap 613780, overlap 613783 613777 CACAATCTATTGTGA GGGCTGTTGACTGT CAGCAGTCA ACAGTTAACAGCCC TGATTAGTAGTTATG Ava_0493 614881 - 613883 - | transaldolase B TERM 554 614920 - 614974 + r 71 -7.3 -3.89756 | gap 2, opp_overlap 614952, overlap 614922 614923 GTTAAGACTTACTTG CT--TGGTTGCTAGATCCCCGACTTCT TCA ATAAGTCGGGGATCTGACCACCGTTAG TTATTGCTTTGGACT TERM 555 614922 - 614970 + r 100 -16.1 -3.59936 | opp_overlap 614952, overlap 614920 614923 TAAGACTTACTTGCT TGGTTGCTAGATCCCCGACTTCT TCA ATAAGTCGGGGATCTGACCACCG TTAGTTATTGCTTTG TERM 556 614923 - 614969 + r 100 -17.4 -2.74877 | opp_overlap 614952, overlap 614922 614920 AAGACTTACTTGCTT GGTTGCTAGATCCCCGACTTCT TCA ATAAGTCGGGGATCTGACCACC GTTAGTTATTGCTTT Ava_0494 616605 - 615175 - | pyruvate kinase TERM 557 615303 - 615323 + g 88 -9.9 -4.18702 | CCGTTCTCACTGCGG TGTTTATGA GAT TCATAAACA TTTCTTCCGCATTGT Ava_0495 617767 - 616736 - | glyceraldehyde-3-phosphate dehydrogenase Ava_0496 620352 - 617971 - | putative phosphoketolase TERM 558 618908 - 618898 - G 75 -8.2 -3.89291 | GTAACAGGAGAAGAA GCCG TGA CGGC CTGTCAGCAGATATC TERM 559 620279 - 620290 + g 70 -7.2 -3.75517 | overlap 620275 AAATAGTTAGCTGCA CGCC AGTA GGCG TTGATTTTATACAGT TERM 560 620633 - 620649 + r 76 -4.5 -5.22312 | opp_overlap 620633 ATGTAATTCAAAATA CAAATAG TAG TTATTTG TTTTTTGGTATGACT TERM 561 620836 - 620797 - R 100 -10.1 -5.27923 | overlap 620798 620799 CAACGCCATAAAAAA TTGTCAGGGGTATAAGT ATTCAA ACTTACACCCCTGACTC AAACCCTAGTTGTTT TERM 562 620835 - 620798 - R 100 -13.6 -3.75669 | overlap 620797 620799 AACGCCATAAAAAAT TGTCAGGGGTATAAGT ATTCAA ACTTACACCCCTGACT CAAACCCTAGTTGTT TERM 563 620834 - 620799 - R 100 -17.1 -2.84317 | overlap 620798 620797 ACGCCATAAAAAATT GTCAGGGGTATAAGT ATTCAA ACTTACACCCCTGAC TCAAACCCTAGTTGT Ava_0497 621666 - 620929 - | 2-phosphosulfolactate phosphatase TERM 564 621237 - 621258 + g 70 -3.8 -4.83615 | gap 1, opp_overlap 621240 621241, overlap 621241 CCCAGCCTGAGCCGA CAATCCAGA CTGTC TCTGG-TTG TTTTTCTAGAAGATA TERM 565 621241 - 621255 + g 73 -5.7 -4.52873 | opp_overlap 621241 621240, overlap 621237 GCCTGAGCCGACAAT CCAGA CTGTC TCTGG TTGTTTTTCTAGAAG TERM 566 621462 - 621474 + g 100 -9.1 -4.82901 | CACCACCACGCTCTC CGGCT CGT AGCCG TTTTTGTGGAGGCCA Ava_0498 621942 - 622361 + | CopY family transcriptional regulator TERM 567 622453 - 622466 + G 81 -5.3 -5.13648 | TTGGGATACGCGGTG GCAAA GAAC TTTGC TTTTCTTTCTGTTTC TERM 568 623144 - 623157 + G 77 -3.8 -5.08255 | CCAGAAGCCCAATTC CCGT CTTGGC ACGG TTTTATTTTGGCGCT Ava_0499 622358 - 623206 + | hypothetical protein TERM 569 623233 - 623214 - T 70 -2.8 -5.09204 | gap 1 ACACTTGAACAAAAA TGTTG-CGC GCA GCGTCAGCA TTCGACTTATACCAA TERM 570 623379 - 623399 + T 100 -9.8 -5.14563 | opp_overlap 623379 TTCAGCAATCACCAA CAGGACTT AGATA AAGTCCTG TTTTTTAATAAAAAA TERM 571 623399 - 623379 - T 78 -9.8 -3.29096 | opp_overlap 623379 TTCAGCAATCACCAA CAGGACTT AGATA AAGTCCTG TTTTTTAATAAAAAA TERM 572 623546 - 623581 + T 76 -7.6 -4.15044 | opp_overlap 623557, overlap 623550 ATGCACTTCATTCTG TACTGTAGAGACGTTG CATG CAACGTCTCTACTTCA TTTATTGGGCGCAAC TERM 573 623550 - 623577 + T 100 -17.2 -3.68738 | opp_overlap 623557, overlap 623546 ACTTCATTCTGTACT GTAGAGACGTTG CATG CAACGTCTCTAC TTCATTTATTGGGCG Ava_0500 624110 - 623661 - | transport-associated protein Ava_0501 624826 - 626328 + | histidine kinase Ava_0502 626990 - 626421 - | hypothetical protein TERM 574 626926 - 626916 - G 78 -5.4 -4.98616 | overlap 626919 GGAAAACATCAAAAA CAAC AGT GTTG GTATCACTGCTATCA TERM 575 626935 - 626919 - G 70 -5.1 -4.54753 | overlap 626916 AAACATCAAAAACAA CAGTGTT GGT ATCACTG CTATCACACCTAACC TERM 576 627297 - 627269 - R 86 -8.3 -4.42619 | overlap 627270 GAAGACTCCATAAAA CTACGAGTACCTA AAA TAGATACTCATAA GGTAATACGCACCTA TERM 577 627296 - 627270 - R 75 -9.6 -3.24848 | overlap 627269 AAGACTCCATAAAAC TACGAGTACCTA AAA TAGATACTCATA AGGTAATACGCACCT TERM 578 627427 - 627398 - R 91 -10.1 -4.35958 | overlap 627395 627399 GCACCAAATAAATAA CGTAGAGACTTTG TATA CAACGTCTCTACA GTCCAAAGTAAAGCA TERM 579 627426 - 627399 - R 84 -11.4 -3.20491 | overlap 627398 627395 CACCAAATAAATAAC GTAGAGACTTTG TATA CAACGTCTCTAC AGTCCAAAGTAAAGC TERM 580 627605 - 627626 + r 93 -6.6 -5.44837 | opp_overlap 627605 TGACCACTGACAAAA CTCTATCC CCTTAT GGGTAGAG TTTTTATATTTTTTT Ava_0503 628466 - 627630 - | hypothetical protein Ava_0504 628799 - 629002 + | hypothetical protein TERM 581 629075 - 629111 + T 87 -12.4 -3.12351 | opp_overlap 629077, overlap 629077 CACTCAGGTTGTCAA AAGTCCAGAGTCCAAG CTAGC CTTTGACTCTGGACTC TTGACTATGGACAGC TERM 582 629109 - 629077 - T 100 -15 -4.08767 | opp_overlap 629077 629075 CTCAGGTTGTCAAAA GTCCAGAGTCCAAG CTAGC CTTTGACTCTGGAC TCTTGACTATGGACA TERM 583 629077 - 629109 + T 100 -15 -3.12327 | opp_overlap 629077, overlap 629075 CTCAGGTTGTCAAAA GTCCAGAGTCCAAG CTAGC CTTTGACTCTGGAC TCTTGACTATGGACA Ava_0505 636220 - 629243 - | CheA Signal transduction histidine Kinases (STHK) TERM 584 630338 - 630361 + g 76 -9.6 -3.48668 | TAGGTCATAAATTTC CAGGCGAGAA ATAG TTCTAGCCTG TTCTGGTGTCATAAT TERM 585 636198 - 636222 + g 73 -3.5 -5.02074 | overlap 636201 AAGTAACCTAAAATC CTCTGTTGTTG TTC CGGCAGCATAG TTTTTTAGCCAATAG Ava_0506 639280 - 636332 - | chemotaxis sensory transducer TERM 586 638953 - 638970 + g 84 -9.9 -3.78229 | opp_overlap 638952 CGTTGTTGTGAAGAT TCGCTGA CTGC TCAGCGA TTGATTTTGATTGTT Ava_0507 639807 - 639277 - | CheW protein TERM 587 639844 - 639874 + r 70 -5.4 -4.39166 | GCAGTAGTTGTTTGA CTGTTCCCACCAAT TCG GTTGGTTGAAACGG TTTTGCTATGTAAGC Ava_0508 640186 - 639821 - | response regulator receiver domain-containing protein TERM 588 640458 - 640430 - R 93 -12.6 -3.32333 | opp_overlap 640432, overlap 640423 ATAGATAATTACGAA TGGGTAATAGGC CTATT ACCTATTACCCA TTACCCATTACCAAA Ava_0509 641697 - 640459 - | response regulator receiver domain-containing protein TERM 589 642543 - 642524 - g 74 -4.2 -4.98255 | CTGGAAGCACAAAAA CAGGAGGT GGAC ACATCCCG TGAACAAATTGAGCA TERM 590 643652 - 643641 - g 78 -5.8 -4.78107 | TATTATCATTAAAAA CAGC AACT GCTG AATGCTGGGGTCGGA Ava_0510 642104 - 643855 + | hypothetical protein Ava_0511 644900 - 643872 - | PP-loop Ava_0512 645247 - 644936 - | hypothetical protein TERM 591 645405 - 645378 - R 83 -11.4 -3.05914 | ATTTAATCAGATAGA TTCTCCTCTCCA AGAA CGAAGAGGAGAA CAACGGATAAGTTGT Ava_0513 646476 - 645421 - | cytochrome c assembly protein Ava_0514 648358 - 646646 - | hypothetical protein TERM 592 647889 - 647905 + g 73 -3.7 -4.95896 | GGGTTTTTTGGTTGA GCGAAAA TAC TTTTGGC TTTTTGTGGGTTTCT Ava_0515 649648 - 649019 - | hypothetical protein TERM 593 649834 - 649890 + H 90 -12.6 -3.14647 | opp_overlap 649836 649843, overlap 649843 TCTCCTCCAGCCAAT AATTAGAAAGGTCAGTAGTCAAAAAT TTATC ACTTTTGACCACTGACCTTTCTAAGA TTGACTATAGTCACT TERM 594 649888 - 649836 - H 100 -24 -3.67597 | opp_overlap 649834 649843, overlap 649843 TCCTCCAGCCAATAA TTAGAAAGGTCAGTAGTCAAAAAT TTATC ACTTTTGACCACTGACCTTTCTAA GATTGACTATAGTCA TERM 595 649843 - 649881 + H 93 -11.9 -3.9279 | opp_overlap 649836 649843, overlap 649834 GCCAATAATTAGAAA GGTCAGTAGTCAAAAAT TTATC ACTTTTGACCACTGACC TTTCTAAGATTGACT TERM 596 649881 - 649843 - H 100 -16.3 -4.14257 | opp_overlap 649843 649834, overlap 649836 GCCAATAATTAGAAA GGTCAGTAGTCAAAAAT TTATC ACTTTTGACCACTGACC TTTCTAAGATTGACT Ava_0516 650392 - 651735 + | acetyl-CoA carboxylase biotin carboxylase subunit Ava_0517 652257 - 651964 - | hypothetical protein Ava_0518 652524 - 652643 + | photosystem II protein PsbX TERM 597 652966 - 652930 - f 88 -10.9 -3.74693 | opp_overlap 652926 652932 652940, overlap 652932 GCGTAGCGCAGTAAA TAGCTTCAGAGCTTCTG GGT CAGATGCTTTGAAGCTT AAATATTATATTGTG TERM 598 652964 - 652932 - f 95 -13.5 -3.4582 | opp_overlap 652926 652932 652940, overlap 652930 GTAGCGCAGTAAATA GCTTCAGAGCTTCTG GGT CAGATGCTTTGAAGC TTAAATATTATATTG TERM 599 652932 - 652964 + F 100 -15.7 -3.24255 | opp_overlap 652932 652930, overlap 652926 652940 GTAGCGCAGTAAATA GCTTCAGAGCTTCTG GGT CAGATGCTTTGAAGC TTAAATATTATATTG Ava_0519 653046 - 653951 + | Ycf66-like TERM 600 654029 - 654060 + G 86 -8.1 -4.74103 | gap 1, opp_overlap 654042, overlap 654031 ATTTACTTCTCAGTT CT-GGCTCCAAAGA CCAAT TCATTGGAGCCTAG TTTTTGGCTTGGCGA TERM 601 654031 - 654057 + G 81 -10.9 -3.28592 | opp_overlap 654042, overlap 654029 TTACTTCTCAGTTCT GGCTCCAAAGA CCAAT TCATTGGAGCC TAGTTTTTGGCTTGG Ava_0520 654006 - 654566 + | WD-40-like beta propeller repeat-containing protein TERM 602 654676 - 654712 + F 88 -12.6 -3.02471 | opp_overlap 654675 654676 654686, overlap 654686 ATCTGAAAATTAAAT TTGGGAAAGATGAAAC TAGGT GTTTCATTTTTCTCAA TATCTATGATAAGAA TERM 603 654686 - 654702 + G 75 -5.2 -4.90455 | opp_overlap 654676 654675 654686, overlap 654676 TAAATTTGGGAAAGA TGAAAC TAGGT GTTTCA TTTTTCTCAATATCT TERM 604 654915 - 654944 + G 95 -9.4 -4.45517 | overlap 654916 TGAGCGATTAGCTAT TTACCGCTTCAA CAGTGA TTGGAGCGGTAG TTTTATCAATCGTTT TERM 605 654916 - 654943 + G 81 -10.7 -3.26226 | overlap 654915 GAGCGATTAGCTATT TACCGCTTCAA CAGTGA TTGGAGCGGTA GTTTTATCAATCGTT TERM 606 655085 - 655065 - g 73 -5.4 -4.64766 | opp_overlap 655065 655063 655068, overlap 655068 GCGATATCGCAAAAA TGAGCCGT TTGCT ACGGCTGA TATTTACGATGCAGG TERM 607 656586 - 656603 + G 70 -2.7 -4.93296 | AGTCGGCATCTTTCG CTTTGAT TCTG ATCAGGG TTTTTGTAGTGGTGA Ava_0521 654685 - 657903 + | multi-sensor Signal transduction histidine kinase Ava_0522 657981 - 658499 + | WD-40-like beta propeller repeat-containing protein TERM 608 658563 - 658530 - T 85 -3.8 -5.75945 | overlap 658531 AGTGGTGAAAAAAAA TCCCTACTCCCT ATGTTTTTTG AGGGTGTAGGGG TGTAGGGGTGTAGGG TERM 609 658562 - 658531 - T 73 -7.3 -4.04482 | overlap 658530 GTGGTGAAAAAAAAT CCCTACTCCCT ATGTTTTTTG AGGGTGTAGGG GTGTAGGGGTGTAGG Ava_0523 659631 - 658639 - | succinate dehydrogenase iron-sulfur subunit TERM 610 659573 - 659593 + g 75 -5.4 -4.89477 | opp_overlap 659573 GTCTCCATAAGGTAA TTCTGCAC AATAG GAGCAGAA TTTTGTTGTTGACGA Ava_0524 661505 - 661939 + | AbrB family transcriptional regulator TERM 611 662082 - 662056 - f 80 -10.2 -3.53012 | TGTCGGCTGTTGAAA GTTGACGGTTAA CTG TCAGCCGTCAAC TGTCAACAAACTATA TERM 612 663053 - 663041 - g 100 -6.2 -5.93252 | GGGAAAAATAAAAAA CCCC TAGCT GGGG TAACAGGAATTATAT Ava_0525 662312 - 663133 + | abortive infection protein Ava_0526 664198 - 663242 - | protoheme IX farnesyltransferase TERM 613 664065 - 664043 - G 80 -9.1 -3.99775 | AGTGACTAACAATAA CACAGGGTC TACCT GTCCCTGTG CCGCAATCCACATAC Ava_0527 665359 - 664358 - | cytochrome oxidase assembly TERM 614 665044 - 665027 - G 71 -6.9 -4.16182 | overlap 665029 665032 CCAGGATAAACCAAA CAGAGCG ATCG CGCTCAG GCCGATCAAACTCGC TERM 615 665042 - 665029 - G 70 -8.1 -3.67003 | overlap 665027 665032 AGGATAAACCAAACA GAGCG ATCG CGCTC AGGCCGATCAAACTC TERM 616 665078 - 665095 + g 72 -9.9 -2.76399 | opp_overlap 665078, overlap 665077 TAGTCGGTGGAACCA CTCCAAG AACA CTTGGAG ATTCATTTGCTTGGC TERM 617 665095 - 665078 - G 71 -9.9 -2.71144 | opp_overlap 665077 665078 TAGTCGGTGGAACCA CTCCAAG AACA CTTGGAG ATTCATTTGCTTGGC TERM 618 666248 - 666236 - g 86 -7.7 -4.60924 | opp_overlap 666235 666229 CAAATCCCCCAAAAA CAGGA TGC TCCTG GTTTAGGTATTGTGG Ava_0528 665708 - 666775 + | cytochrome C oxidase subunit II, transmembrane region TERM 619 668088 - 668099 + G 73 -5.8 -4.43012 | CAGTGGTGTCATGTT GGCA GCCG TGCC TTTTGATATTCACGT TERM 620 668130 - 668152 + G 71 -3.4 -4.95484 | overlap 668131 668131 CCACGATACTTATTT TGTGGTGG CTCACCT CCACTACG TTTTGTTTGGTGGTA Ava_0529 666961 - 668688 + | cytochrome c oxidase, subunit I Ava_0530 668813 - 669436 + | cytochrome c oxidase subunit III TERM 621 669487 - 669499 + F 100 -10.5 -5.84381 | opp_overlap 669484 ACATAGAATTTAGCC CCCCC TCT GGGGG TTTTTTTATTGGTGC Ava_0531 669663 - 670082 + | hypothetical protein Ava_0532 671026 - 670115 - | K+ channel, inward rectifier Ava_0533 672075 - 671335 - | dienelactone hydrolase TERM 622 671932 - 671911 - G 74 -8.1 -3.94002 | overlap 671923 TACTACGTAACCAAA TCCAGCTAA GTAG TTAGCTAGA CGAATTATTGGGCTA TERM 623 672473 - 672457 - g 74 -7.9 -4.04206 | GCAGCCGTACAGAAA TGCTGCG TTA CGCTGCA TCAGCCACCAGAATG Ava_0534 672298 - 672573 + | hypothetical protein Ava_0535 673994 - 672612 - | Rieske (2Fe-2S) region Ava_0536 674697 - 675146 + | ferric uptake regulator family protein TERM 624 675168 - 675189 + T 73 -8.7 -3.38966 | opp_overlap 675163 675172, overlap 675170 TGGGAGAAAATTGTA CAGACGCGA TTAA TCGCGTCTC TTATAACTCACTTTT TERM 625 675170 - 675187 + T 80 -11.3 -3.25668 | opp_overlap 675163 675172, overlap 675168 GGAGAAAATTGTACA GACGCGA TTAA TCGCGTC TCTTATAACTCACTT Ava_0537 678069 - 675190 - | pentapeptide repeat-containing protein Ava_0538 678203 - 679969 + | response regulator receiver domain-containing protein Ava_0539 681767 - 680088 - | transposase IS4 TERM 626 680611 - 680624 + g 74 -6.7 -4.3129 | opp_overlap 680611 GTTGCTTGCCAACTA GTTCC GGGG GGAAC TTTTCCTACTAAATC TERM 627 681825 - 681801 - R 72 -9.3 -2.72511 | opp_overlap 681790 681803, overlap 681800 TCCACTGTTCCAAAC TCTTGAGGGGC TTA ACCCCTCAATA ATTCGCCAACAGTAT TERM 628 681803 - 681823 + r 78 -11.2 -2.71011 | opp_overlap 681801 681800, overlap 681790 CACTGTTCCAAACTC TTGAGGGG CTTAA CCCCTCAA TAATTCGCCAACAGT TERM 629 681923 - 681899 - R 100 -15.7 -3.19175 | opp_overlap 681900 TTCCAAGATATTTAA GCCCCTCTCCG TGT CGGAGAGGGGT TTGGGGAGAGGTCAT TERM 630 681900 - 681922 + r 100 -19.2 -3.53444 | opp_overlap 681899 TCCAAGATATTTAAG CCCCTCTCCG TGT CGGAGAGGGG TTTGGGGAGAGGTCA Ava_0540 682518 - 681895 - | molybdopterin-guanine dinucleotide biosynthesis protein A TERM 631 682580 - 682597 + r 84 -11.3 -3.6279 | opp_overlap 682582 TAAACCATCCGTAGA GACGCGA TTTA TCGCGTC TTCTTCACCCAATTT Ava_0541 682958 - 682725 - | hypothetical protein Ava_0542 683075 - 686059 + | TPR repeat-containing protein TERM 632 686266 - 686246 - f 86 -9.7 -4.14945 | opp_overlap 686247, overlap 686229 686247 GGAACAAGAATCAAA GTCCCCCTT TTG AAGGGGGAT TTAGGGGGATCAAAC TERM 633 686247 - 686265 + F 100 -13.2 -3.54424 | opp_overlap 686229 686246 686247 GAACAAGAATCAAAG TCCCCCTT TTG AAGGGGGA TTTAGGGGGATCAAA TERM 634 686265 - 686247 - f 93 -13.2 -3.07882 | opp_overlap 686247, overlap 686229 686246 GAACAAGAATCAAAG TCCCCCTT TTG AAGGGGGA TTTAGGGGGATCAAA Ava_0543 686447 - 686791 + | hypothetical protein Ava_0544 686788 - 688233 + | hypothetical protein Ava_0545 690389 - 688254 - | hypothetical protein Ava_0546 691031 - 690705 - | hypothetical protein Ava_0547 691037 - 691651 + | ATP-dependent Clp protease proteolytic subunit ClpP TERM 635 691710 - 691665 - T 74 -9.3 -3.03619 | opp_overlap 691665, overlap 691670 AATCATTGGTCAATA GTCAATAGTCAATAGTCAA TTTACTTG CTAACTATGGACTATTGAC TTTGGACTATTGACT Ava_0548 692562 - 691729 - | hypothetical protein TERM 636 695780 - 695811 + G 70 -7.4 -3.90112 | overlap 695782 AGTTAAAAATTTAGG TGTCGGTAATGTCA ATGG TGATATTTCCGATA TTTACTTACCAAACG Ava_0549 693519 - 695870 + | 3'-5' exoribonuclease, VacB and RNase II Ava_0550 695888 - 696511 + | aromatic acid decarboxylase TERM 637 696567 - 696550 - f 79 -11.3 -2.90075 | opp_overlap 696545 696552, overlap 696552 GCTCCGCGAACGAGA GACGCGA TTAA TCGCGTC TGTACAATTGTTGAA TERM 638 696622 - 696599 - f 74 -9.6 -3.02144 | gap 1, opp_overlap 696591 GGATCTGGTCTAATA CCCCAACCTGC ACA AC-GGTTGGGG TATAGGGATATAATT Ava_0551 696687 - 697352 + | hypothetical protein Ava_0552 697675 - 697481 - | hypothetical protein aroK 698769 - 699314 + | shikimate kinase TERM 639 699558 - 699568 + G 71 -4 -4.9041 | CCTCAAAGACCAAGT TATC CGC GATA TTGTTTTTTTATCCT Ava_0554 699400 - 700293 + | acetylglutamate kinase Ava_0555 700537 - 701058 + | hypothetical protein Ava_0556 701136 - 701996 + | hypothetical protein Ava_0557 702852 - 702208 - | pyridoxamine 5'-phosphate oxidase TERM 640 702345 - 702329 - G 70 -7.9 -3.58343 | opp_overlap 702341 GGGATCACTCGCAAA CCCCCCC AGT GGGAAGG TCTAGGAATCTCCTG Ava_0558 702876 - 703964 + | hypothetical protein Ava_0559 704622 - 703978 - | hypothetical protein TERM 641 704490 - 704470 - G 80 -4.7 -5.15526 | ATAGAAAACTAAAAA TCCTAGCCA CCA TAGCCAAGA GCGTCCGCTTCTGGT Ava_0560 705582 - 705103 - | hypothetical protein TERM 642 705662 - 705625 - R 80 -10.8 -3.16981 | opp_overlap 705625 705633, overlap 705633 GACAATCATAGCTAA TAAAAAAACCCAGTTG TTGGCT CATCTGGGTTTTTCTA ATTATCAAAATTATG TERM 643 705654 - 705633 - R 93 -5.8 -5.8187 | opp_overlap 705625 705633, overlap 705625 TAGCTAATAAAAAAA CCCAGTTG TTGGCT CATCTGGG TTTTTCTAATTATCA TERM 644 705633 - 705654 + r 80 -5.8 -5.01535 | opp_overlap 705633 705625, overlap 705625 TAGCTAATAAAAAAA CCCAGTTG TTGGCT CATCTGGG TTTTTCTAATTATCA Ava_0561 706456 - 705740 - | hypothetical protein TERM 645 706200 - 706215 + g 78 -4 -5.08255 | AGCTTTACTGTTATT GTAGAA GCGT TTCTGC TTTTGTTTTCAAACT Ava_0562 707805 - 706750 - | phospholipid/glycerol acyltransferase TERM 646 707321 - 707337 + g 100 -12.3 -3.55946 | overlap 707319 GACCCCTCTGCTATT GGTTGGG CTA CCCAACC TCTTGTTTGACCTAA Ava_0563 708853 - 707969 - | binding-protein dependent transport system inner membrane protein TERM 647 708949 - 708998 + H 100 -15.4 -2.72829 | gap 2, opp_overlap 708962 708963 708975 708976 708980 708981, overlap 708963 708981 TTGATCCCCCCTCAC CCCCCTTAAAAAGGGGGGAACT AAAATCAA AGT--CCCCCTTTTTAAGGGGG ATTTAGGGGGATCTA TERM 648 709005 - 708975 - H 76 -6.8 -4.41047 | opp_overlap 708963 708949 708981 709000, overlap 708962 708963 708976 708980 708981 AGGGGGGAACTAAAA TCAAAGTCCCCCTT TTT AAGGGGGATTTAGG GGGATCTAAAATATT TERM 649 709004 - 708976 - H 79 -10.3 -3.24146 | opp_overlap 708963 708949 708981 709000, overlap 708962 708963 708975 708980 708981 GGGGGGAACTAAAAT CAAAGTCCCCCTT TTT AAGGGGGATTTAG GGGGATCTAAAATAT TERM 650 709000 - 708980 - H 86 -9.7 -4.27062 | opp_overlap 708963 708949 708981, overlap 708962 708963 708976 708975 708981 GGAACTAAAATCAAA GTCCCCCTT TTT AAGGGGGAT TTAGGGGGATCTAAA TERM 651 708981 - 708999 + H 100 -13.2 -3.55071 | opp_overlap 708962 708963 708980 708976 708975 708981, overlap 708963 708949 GAACTAAAATCAAAG TCCCCCTT TTT AAGGGGGA TTTAGGGGGATCTAA TERM 652 708999 - 708981 - H 95 -13.2 -3.15152 | opp_overlap 708963 708949 708981, overlap 708962 708963 708980 708976 708975 GAACTAAAATCAAAG TCCCCCTT TTT AAGGGGGA TTTAGGGGGATCTAA purN 709168 - 709824 + | phosphoribosylglycinamide formyltransferase Ava_0565 710567 - 709986 - | abortive infection protein Ava_0566 711686 - 710652 - | hypothetical protein TERM 653 711130 - 711144 + g 74 -6.4 -4.51097 | overlap 711125 711131 ATGGGGTCTACGCCT TTACCG TGG CGGTAG TTTTGTGCTGCTTCC Ava_0567 712117 - 711935 - | hypothetical protein TERM 654 712263 - 712206 - R 85 -12.5 -2.72263 | gap 1, opp_overlap 712227, overlap 712205 712225 ATAGTTGGTGTAAAC GGTAATGGGTAATAGCGAATAGGTAA TTGTTTT TTA-CTATTACCTATTACCCATTACC AATTACCAAAATTAT Ava_0568 712594 - 712280 - | ferredoxin (2Fe-2S) TERM 655 713730 - 713750 + G 73 -5.4 -4.58663 | gap 1 GGGGGGTATATTTTA GGTGGG-GC GATC GCTCCCATC TTTTTCAACACTGCT Ava_0569 712881 - 715511 + | bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase Ava_0570 717441 - 715576 - | hypothetical protein TERM 656 715622 - 715633 + g 82 -3 -5.4182 | ATTGCTTTTTGCCTC TCTT TTGA AAGA TTTTTATTTGTGATT TERM 657 716970 - 716986 + g 71 -4.5 -4.67353 | opp_overlap 716982 716984 CTGGTTTCTTGTCTC GTGTATT TAT AATATAC TTTTTAAGTAAATAA Ava_0571 717735 - 718136 + | hypothetical protein TERM 658 718270 - 718289 + T 76 -6.5 -4.3739 | opp_overlap 718269 CCAAACTAATTTAAC TCAACTG TGCCAC CAGTTGA TTTTCTAGCAAAGTA Ava_0572 719863 - 718265 - | heat shock protein Hsp70 TERM 659 719162 - 719190 + g 73 -3.8 -4.9251 | gap 1, opp_overlap 719161 TGTACCCCCTAAATT CTGCCCG-GCTTT CGCC AATACACGGGCAG TTTTGGTTTTTTGTT TERM 660 719383 - 719364 - G 70 -7.8 -3.60151 | opp_overlap 719364 TCTGCTAAACCATAA CCCAAAGC GGCG GCTGTGGG TTCATCTAACATCCG uvsE 720870 - 719923 - | putative UV damage endonuclease TERM 661 720194 - 720219 + g 70 -5.5 -4.57341 | gap 1, opp_overlap 720185, overlap 720197 CAAATATGATGATGG GCATCAAAGACC ATT GGTATTTGA-GC TTTTTGGCACACGTT TERM 662 720758 - 720771 + g 75 -2.3 -5.26918 | CGTGTGCGCGTCATT GTCCG AAAT CGCAC TTTTTTATCAAATGT Ava_0574 721198 - 721416 + | hypothetical protein TERM 663 721473 - 721498 + T 100 -14.9 -5.58209 | opp_overlap 721473 TTCATTTATAAAAAA GGTAACTCTGA AAAC TCAGAGTTACC TTTTTTTGGCTTTGA TERM 664 721498 - 721473 - T 100 -14.9 -5.28176 | opp_overlap 721473 TTCATTTATAAAAAA GGTAACTCTGA AAAC TCAGAGTTACC TTTTTTTGGCTTTGA Ava_0575 723369 - 721528 - | FtsH peptidase TERM 665 722678 - 722648 - G 70 -5.3 -4.41348 | overlap 722649 722650 GCTTGTTCAAATAAA TCGCGGACGCGGG ACGCA CCCACACCAACGA ACATTTCTACAAACT Ava_0576 724248 - 723457 - | aminotransferase, class IV TERM 666 723716 - 723704 - G 73 -9.1 -3.53091 | ATTCCCTCTGTTAAA GGTGG TGT CCACC AACTCCCATTTTGCC Ava_0577 725203 - 724418 - | hypothetical protein Ava_0578 725541 - 726020 + | photosystem II 11 kD protein TERM 667 726387 - 726417 + F 78 -7.7 -4.18693 | opp_overlap 726388, overlap 726383 726388 TAAAATTTGATACAT ATTCATCCCAGTT ACTTA AATTGGGATGAAG TTTGATTTGTCCTTT TERM 668 726416 - 726388 - f 70 -9 -3.02109 | opp_overlap 726387 726383 726388 AAAATTTGATACATA TTCATCCCAGTT ACTTA AATTGGGATGAA GTTTGATTTGTCCTT TERM 669 726388 - 726416 + F 79 -11.2 -3.09589 | opp_overlap 726388, overlap 726387 726383 AAAATTTGATACATA TTCATCCCAGTT ACTTA AATTGGGATGAA GTTTGATTTGTCCTT Ava_0579 726435 - 727940 + | hypothetical protein Ava_0580 728933 - 727962 - | hypothetical protein TERM 670 728215 - 728229 + g 70 -3.6 -4.90869 | TCCCAAGCATATTCA TCTTGA TAT TTAAGA TTTTTCGTTAATCGT TERM 671 728875 - 728863 - G 82 -7.7 -4.51174 | CCAGTATAAGGAAAA GGTTC ATC GAACC AATAGCGATCGCCAT Ava_0581 732040 - 729107 - | DNA polymerase I TERM 672 729383 - 729395 + g 74 -4.9 -4.83759 | CAATAAACCAGCATC TTTAG CAC CTAAA TTTTTCAATTTGCTT TERM 673 729508 - 729523 + g 75 -3.2 -5.12617 | opp_overlap 729508 TCGTCTCAACATAAC CAAGAG ATAT CGCTTG TTTTTTCACTCCTTC TERM 674 730014 - 730027 + g 70 -5.3 -4.56914 | opp_overlap 730014 AATGCTGGCAAAGCA TCTAC ATAA GTAGA TTTTAATTTCGATAA Ava_0582 732608 - 735667 + | Integrins alpha chain TERM 675 735731 - 735758 + F 80 -11.2 -3.15544 | opp_overlap 735723 AGGAAGATTTTTGCC CCTCTCCCCGAC CCCC GACGCGGAGAGG TTCATCAAACTCACG TERM 676 735808 - 735826 + F 80 -11 -3.16743 | TTTTTTTTGCGATGA GGAGGGTT AAA AGCCCTCC TTCAATATCTGCGTT TERM 677 736926 - 736885 - g 83 -9 -4.09685 | overlap 736919 CTTGACCCCGTAAAA GGCTTCACTATTAGTTTT GATGTG AAAATTAACAGTGAAACC CACACCAGTGATGAT Ava_0583 735883 - 739050 + | putative Ig Ava_0584 739549 - 739106 - | cyclase/dehydrase Ava_0585 739757 - 739569 - | hypothetical protein Ava_0586 741548 - 739914 - | radical SAM family protein Ava_0587 741995 - 741570 - | hypothetical protein TERM 678 741981 - 741963 - G 100 -8.8 -5.14645 | overlap 741976 ATAAGGCAAGAAAAA CCCCCCTA ACG TAGGGTGG GCATTGCCCACCAAA TERM 679 741994 - 741976 - G 73 -10.2 -2.52795 | overlap 741963 AACCCCCCTAACGTA GGGTGGGC ATT GCCCACCA AAACCTGTATACAAT Ava_0588 743875 - 742091 - | hypothetical protein TERM 680 742165 - 742177 + g 77 -6.2 -4.60143 | overlap 742148 GTAGTAAATATTCTG CGGC TTCAT GCCG TTTTATCTCATCTCT TERM 681 742198 - 742210 + g 71 -3.3 -4.95484 | TCTCATCTCTTGTAC CGCGT AAT ACTCG TTTTATTTCATCATC TERM 682 743964 - 743944 - R 91 -6.8 -5.28176 | TTTACCCAGAAAAAA GGGCGAGT CAGAC ACCCACCC AGTAAAAAAGTACTA Ava_0589 745089 - 744001 - | chorismate synthase Ava_0590 745376 - 745618 + | BolA-like protein TERM 683 745955 - 745971 + G 76 -6.6 -4.43911 | opp_overlap 745957 TATCAATGGTGAATT TATCGG TGGTT CCGATA TTTTGATTGAACTTT Ava_0591 745713 - 746036 + | glutaredoxin-like protein TERM 684 746209 - 746223 + T 74 -4.2 -4.90778 | opp_overlap 746208 GCGGGACAACACACC CTACCC ACT GAGTAG TTTTATTTACGTACC Ava_0592 746726 - 746226 - | molybdopterin binding domain-containing protein Ava_0593 747206 - 746871 - | photosystem II reaction center protein Psb28 Ava_0594 750536 - 747405 - | hypothetical protein Ava_0595 751105 - 752382 + | Signal transduction histidine kinase (STHK), LytS Ava_0596 752478 - 752939 + | transport-associated protein TERM 685 753133 - 753165 + F 76 -6.4 -4.41047 | overlap 753134 ACGTAAGTCCTATTT GTATCAGTAGTTAG GTGTA CTAACTACTGAGAA TTTTCGTTGACAACT TERM 686 753134 - 753164 + F 77 -9.9 -3.24146 | overlap 753133 CGTAAGTCCTATTTG TATCAGTAGTTAG GTGTA CTAACTACTGAGA ATTTTCGTTGACAAC Ava_0597 753256 - 753690 + | hypothetical protein TERM 687 753760 - 753737 - f 70 -5.3 -4.50993 | opp_overlap 753735 753737 GTAAACAAATAGAAA CCCGATTTA TGAAAT TAAGTCGGG TATTTGCTATTCTTG Ava_0598 753914 - 754321 + | hypothetical protein TERM 688 754378 - 754356 - T 100 -12 -4.7871 | opp_overlap 754356 AACTATCATTAAAAA CCCGGTTTGT TGG ACAATCCGGG TTTTTTAGAATGTAC TERM 689 754356 - 754378 + T 100 -12 -5.07567 | opp_overlap 754356 AACTATCATTAAAAA CCCGGTTTGT TGG ACAATCCGGG TTTTTTAGAATGTAC TERM 690 754500 - 754485 - T 100 -6.8 -6.02914 | opp_overlap 754485 GCGACATAAAAAAAA GGCAGG AAGC CCTACC TTTAAACCCAAAAAG Ava_0599 755340 - 754600 - | ABC transporter-like Ava_0600 756632 - 755466 - | DevC protein Ava_0601 757953 - 756733 - | secretion protein HlyD Ava_0602 758307 - 758924 + | TetR family transcriptional regulator Ava_0603 759014 - 759355 + | hypothetical protein Ava_0604 759355 - 760053 + | hypothetical protein TERM 691 760083 - 760066 - T 95 -11.3 -4.57569 | opp_overlap 760068 TGATTGGGTGAAAAA GACGCGA TAAA TCGCGTC TCTAAAGTTGGTTTA Ava_0605 762374 - 760191 - | pentapeptide repeat-containing protein Ava_0606 762761 - 762435 - | hypothetical protein TERM 692 763568 - 763553 - g 79 -6.8 -4.64334 | AATTTCCCAAGAAAA GCTGCC CAAC AGCAGC AAAAGTATCCAGTCT Ava_0607 763128 - 763589 + | hypothetical protein TERM 693 763757 - 763735 - T 80 -9.8 -3.48593 | opp_overlap 763727 TATCCTCGCACATAA CGCACCGCCT CAT AGAAGGTGCG TTACGGCTAAATTTT TERM 694 763890 - 763852 - T 77 -10.5 -2.79749 | opp_overlap 763861, overlap 763851 763861 TAGCCGTAACACAAC GGCAATAAAGCGG-GAAGA AAA TCTACACCGCTTT-TTGCC TCCCCTACTTAAGAT TERM 695 763861 - 763882 + T 71 -5.1 -4.66609 | gap 1, opp_overlap 763861 763852 763851 CACAACGGCAATAAA GCGG-GAAGA AAA TCTACACCGC TTTTTGCCTCCCCTA Ava_0608 764343 - 764143 - | hypothetical protein TERM 696 764339 - 764327 - G 70 -7.7 -3.61404 | TGATTAAGTACATAA TCTCC TGT GGAGA ACATAACAGTATTAC Ava_0609 765527 - 766978 + | neutral invertase TERM 697 767022 - 767041 + T 88 -5.6 -5.60993 | ATTTTATATGCGTAA CCCCTTGT AATT GCCAGGGG TTTTTTTATGAGAAA Ava_0610 768239 - 767190 - | hypothetical protein Ava_0611 768500 - 768859 + | hypothetical protein Ava_0612 770300 - 768978 - | GAF sensor Signal transduction histidine kinase TERM 698 770246 - 770228 - G 73 -5.3 -4.58303 | gap 1, overlap 770230 TTAAAGATGATAAAA GAGCGATC GCCA GA-CGCTC ACGTTGCCACATTTG Ava_0613 770956 - 772374 + | periplasmic sensor Signal transduction histidine kinase Ava_0614 773250 - 772747 - | hypothetical protein TERM 699 773484 - 773499 + H 70 -3.2 -5.01732 | overlap 773485 TGACAGTTTATGTTA GCCTGA TCAA TCAGGA TTTTTTAGCAAAATT Ava_0615 773994 - 774680 + | two component transcriptional regulator Ava_0616 774871 - 775143 + | hypothetical protein TERM 700 775224 - 775244 + F 84 -9.8 -3.67823 | overlap 775222 TAGTTGTACGTTAGG GTGTGCTT TATTT AAGCACAC TATTTCTCGTTTATG TERM 701 775354 - 775344 - f 81 -5.4 -5.18726 | opp_overlap 775348 TTGGTATAATAAAAA GTGT TTG ACAC TCAATGGTGTAGTAA TERM 702 775587 - 775606 + G 78 -10 -3.5394 | overlap 775575 CTTGCGGGCATTTTA GGAGCAGT TATC GCTGCTCC TTTGAAGCCAGATTT Ava_0617 775401 - 776417 + | MscS mechanosensitive ion channel Ava_0618 776576 - 777352 + | hypothetical protein Ava_0619 777364 - 778161 + | metallophosphoesterase Ava_0620 778294 - 779046 + | hypothetical protein TERM 703 779588 - 779599 + F 76 -5.8 -4.67234 | TGAATAAATCTTTAT GCCA GATT TGGC TTTTTAAGATTCCCT TERM 704 779822 - 779783 - f 73 -5.6 -4.56969 | opp_overlap 779782 779796, overlap 779772 779796 AATGCGACAAATAAA CCATTTGTAGAGACGCGA TGAA TCGCGTCTTCACCCAAGG ATGTGTTGCAATCAT TERM 705 780090 - 780044 - f 74 -4.2 -5.02074 | overlap 780046 CGACGGCTGAAAAAA CCCCTCTCCGCTAGATGCGGAG CGA CTTCCCCCGAAACGGAGAGAGG CTTGAAAACATTTAT Ava_0621 780749 - 782881 + | secretion protein HlyD TERM 706 785163 - 785203 + G 78 -5.6 -4.89852 | gap 1, opp_overlap 785163 TACAACTGCAAGGTA CTTTAGAAGATTTCC-TGT CCCA ACAAGGAGAGCATCTAAAG TTTTTATCACTGTAA Ava_0622 783050 - 785218 + | bacteriocin-processing peptidase TERM 707 785409 - 785438 + F 76 -5.1 -5.05782 | opp_overlap 785408 785406 785409 785413, overlap 785411 ATTTAATAAAATTAT CATAGGGATATAA TTAA TCATATCCCTATA TTTTTTAGCCTGAAT TERM 708 785438 - 785409 - f 71 -9.5 -2.55242 | opp_overlap 785409 785411, overlap 785408 785406 785413 ATTTAATAAAATTAT CATAGGGATATAA TTAA TCATATCCCTATA TTTTTTAGCCTGAAT TERM 709 785411 - 785436 + F 76 -7.7 -4.15748 | opp_overlap 785409 785408 785406 785413, overlap 785409 TTAATAAAATTATCA TAGGGATATAA TTAA TCATATCCCTA TATTTTTTAGCCTGA Ava_0623 785618 - 785806 + | hypothetical protein TERM 710 785904 - 785926 + F 85 -9.2 -4.16284 | opp_overlap 785904 GCTAAATTTTATGAA GCTAGGTACT TTT ATTACCTAGC TTTCTTCACGGGTAT TERM 711 785926 - 785904 - f 75 -9.2 -3.2048 | opp_overlap 785904 GCTAAATTTTATGAA GCTAGGTACT TTT ATTACCTAGC TTTCTTCACGGGTAT Ava_0624 786177 - 786437 + | hypothetical protein TERM 712 786625 - 786590 - f 79 -10.6 -3.14132 | opp_overlap 786576 GGTTGGGTGGAGGAA CGGAACCCAACA TTCTCAAGACTT TGTTGGGTTCCG CTATCGCTCCACCCA TERM 713 786768 - 786746 - f 88 -12.8 -3.01924 | opp_overlap 786746 GATGTTTGCTCAACA GCCAGTTCCT CGG AGAAACTGGC TTTTTTGAGTTTAAA TERM 714 786746 - 786768 + F 100 -10.6 -5.22039 | opp_overlap 786746 GATGTTTGCTCAACA GCCAGTTCCT CGG AGAAACTGGC TTTTTTGAGTTTAAA Ava_0625 787111 - 787317 + | hypothetical protein TERM 715 787357 - 787390 + T 100 -13.5 -4.86133 | gap 1, opp_overlap 787362 CTTATTGATTATGAT GACAAGTCTTGATTTA TCT TAAATCA-GACTTGTC TTTTTGCTATCTATA Ava_0626 788342 - 787416 - | Alpha/beta hydrolase fold Ava_0627 789103 - 789657 + | hypothetical protein TERM 716 789867 - 789891 + GF 72 -9.3 -2.65772 | opp_overlap 789867, overlap 789866 789865 CCACCGGCGTTCAAA TTGCCATCGTC GTT GGCGGTGGTAA CATTTTTCGTGGCGT TERM 717 790080 - 790109 + GF 79 -7.2 -4.49314 | gap 1, overlap 790077 ATATTCGCCGTCGAG CCATCCGTCATCT AGAAA AGG-GACGGGTGG TTATTTTTGGTGCTG pyrH 789728 - 790456 + | uridylate kinase frr 790428 - 790991 + | ribosome recycling factor TERM 718 791002 - 791028 + F 100 -11.7 -5.28778 | TCTAAACAGTTTTCA GGCTGAAGAAT CTCAT GTTCTTCAGCC TTTTTTATCAGTAAT TERM 719 791107 - 791078 - f 77 -10.1 -3.18452 | opp_overlap 791086, overlap 791075 791080 GCGCCAAATAAATGA TATGGAGACGTTG AATG CAACGTCTCTACA GTACAGAATAAAGTG TERM 720 791105 - 791080 - f 79 -10.5 -3.14807 | opp_overlap 791086, overlap 791078 791075 GCCAAATAAATGATA TGGAGACGTTG AATG CAACGTCTCTA CAGTACAGAATAAAG Ava_0630 791228 - 792349 + | geranylgeranyl reductase TERM 721 792444 - 792390 - T 100 -31.8 -3.83375 | overlap 792416 792417 792418 TCAAAATGAAGAGAA GTAGGGTGGGCATTGCCCACCAAA AACCGGA TATGGTGGGCAATGCCCACCCTAC ACCCATACACCCATA TERM 722 792449 - 792416 - T 71 -4.5 -4.7254 | gap 1, overlap 792390 792417 792418 ATTGCCCACCAAAAA CCGG-ATATGGTGGGC AAT GCCCACCCTACACCCA TACACCCATACACCC TERM 723 792446 - 792418 - T 72 -9.5 -2.65504 | overlap 792390 792417 792416 TGCCCACCAAAAACC GGATATGGTGGGC AAT GCCCACCCTACAC CCATACACCCATACA Ava_0631 795231 - 792511 - | hypothetical protein Ava_0632 796663 - 795323 - | hypothetical protein uppP 797882 - 796920 - | undecaprenyl pyrophosphate phosphatase Ava_0634 798128 - 798907 + | hypothetical protein TERM 724 799226 - 799195 - f 83 -9.6 -3.85698 | opp_overlap 799191 799195 799197, overlap 799197 799204 TTGGCTTCTCATAAA CAGTAGAAACCTTG TACG CAAAGTCTCTACTA TATATTGTTGAAGGC TERM 725 799224 - 799197 - f 80 -10 -3.51934 | opp_overlap 799195 799191 799197, overlap 799195 799204 GGCTTCTCATAAACA GTAGAAACCTTG TACG CAAAGTCTCTAC TATATATTGTTGAAG Ava_0635 799271 - 799720 + | photosystem II complex extrinsic protein precursor U TERM 726 801380 - 801394 + G 76 -2.8 -5.27206 | CAGGATTTTGCTGCG TTGCCT TTA AGCCAA TTTTTCTTATCTCTA Ava_0636 799817 - 801646 + | L-aspartate oxidase Ava_0637 802104 - 801868 - | hypothetical protein TERM 727 802759 - 802742 - R 71 -4.9 -4.65916 | opp_overlap 802742, overlap 802743 GCTACGCCAACAAAA CTCCAAA ATGA TTTGGAA GTTCCCTGCTCAGGA Ava_0638 804982 - 802769 - | diguanylate cyclase TERM 728 802839 - 802849 + g 78 -2.4 -5.42862 | TTGGCGCGGTACATG GCTG CAT CCGC TTTTTTTAGCAATGT TERM 729 803488 - 803503 + g 71 -4.7 -4.70659 | CATCAGTAAATTCTT CCTCA TTTTCC TGAGG TTTTTGAGTGTCAAA TERM 730 803882 - 803870 - G 72 -6.3 -4.34737 | opp_overlap 803865, overlap 803866 GCAGCAAGCAACAAA TATCG CCA CGATA TTGGGAATTTTTCCC TERM 731 805632 - 805598 - R 85 -3.7 -5.72622 | gap 1, opp_overlap 805591 805587, overlap 805591 CGCATAAATAAAAAA GTCAACAGGT-GAT TTATGCTT ATCAACCAGTTGAC TGTTTTATTTGTCAT Ava_0639 806672 - 805689 - | thioredoxin domain-containing protein TERM 732 806549 - 806527 - G 100 -16.4 -3.07233 | opp_overlap 806520 GTACAACTCTTAACA CCAGCTTGTG CTA CACAAGCTGG GCTACCTCCTGTTAA Ava_0640 807679 - 806750 - | photosystem I assembly BtpA TERM 733 807452 - 807472 + g 74 -7.6 -4.02817 | gap 1 AATACCGTCCACTCC GCCACTAGC CAGT GCT-GTGGC TTCTTGTTCTGCCCG Ava_0641 808329 - 809651 + | hypothetical protein TERM 734 810717 - 810669 - g 83 -11.8 -2.62192 | gap 1, overlap 810668 810671 TCTCACGTAATCAAC TACGACCTACCCGATAG-CGTCG AAAC CTACGTCCACCGGATCGGTCGTA CTGGTCGTGCTGGTA TERM 735 810715 - 810671 - g 72 -10 -2.8507 | gap 1, overlap 810669 810668 TCACGTAATCAACTA CGACCTACCCGATAG-CGTCG AAAC CTACGTCCACCGGATCGGTCG TACTGGTCGTGCTGG Ava_0642 809721 - 811262 + | DEAD/DEAH box helicase-like TERM 736 811616 - 811604 - g 73 -5.5 -4.61199 | AGCTGATATAGAAAA GCGAA ATC TCCGC GCTCCTGATGTATCT Ava_0643 811356 - 811934 + | hypothetical protein Ava_0644 812993 - 812046 - | aldo/keto reductase Ava_0645 814174 - 813122 - | dihydrouridine synthase TIM-barrel protein nifR3 TERM 737 814211 - 814261 + r 74 -9.2 -3.07935 | overlap 814209 ATCAATCTTAACTGT TGACTGTTGACTGTTAACTGTTGA ATG TTAAAAGTTGACGCTCATCAGTCA TTAGCTCAATACACT Ava_0646 815120 - 814224 - | Beta-lactamase-like TERM 738 815400 - 815419 + H 84 -12.2 -2.93348 | overlap 815395 815408 ATTATTTGTGGGATG GGTAGAGC GATC GCTCTACC TGTGATCTTAATAAA TERM 739 815687 - 815673 - H 78 -8.6 -3.79482 | opp_overlap 815670 815673 AATATTAGAAGATAA CAACAG TAT CTGTTG TAGTTAATGATTATC TERM 740 819340 - 819364 + G 93 -10.8 -4.183 | gap 1 CTTGGCGGGGTGAAG TGGCCAT-GCG ATCG CGCGATGGCCA TTTATTACAAGTTGA Ava_0647 815727 - 820952 + | multi-sensor Signal transduction histidine kinase TERM 741 821233 - 821220 - g 71 -6.7 -4.19238 | opp_overlap 821220 TTCCTAACGGCAAAA TCTGC CAAG GCAGA TTTCCGCCAAGGTAT TERM 742 821411 - 821377 - g 88 -9.4 -4.30034 | overlap 821378 AAAATGGTATTAAAA TCTCATCTCCAAAAAC GCA GTTGTTAGAGATGAGT CTACATAAAGTTATT TERM 743 821410 - 821378 - g 95 -12.9 -3.16936 | overlap 821377 AAATGGTATTAAAAT CTCATCTCCAAAAAC GCA GTTGTTAGAGATGAG TCTACATAAAGTTAT Ava_0648 820968 - 822179 + | diguanylate phosphodiesterase TERM 744 822610 - 822599 - g 71 -4.4 -4.8543 | TAAGTCTGATAAAAA TGAC TTCC GTCA AGGTATGGAGATGGG Ava_0649 822336 - 823499 + | response regulator receiver Signal transduction histidine kinase Ava_0650 824045 - 826450 + | signal transduction protein Ava_0651 827081 - 826809 - | hypothetical protein Ava_0652 827451 - 827104 - | Mo-dependent nitrogenase-like Ava_0653 830689 - 828128 - | abortive infection protein TERM 745 829809 - 829822 + g 71 -2.3 -5.20783 | opp_overlap 829799 ATATACCAACCCGCT TGCCC GGCT GGGGA TTTTTCTATTTCCCT TERM 746 829979 - 829953 - G 87 -4.5 -5.44119 | gap 1, overlap 829956 CGCACGCGAAAAAAA TCACTGGGAC AGGAGGAA GTCCCAG-GA CAAAACGGTGACGCA TERM 747 830657 - 830674 + g 80 -4.8 -5.10154 | CGTCTTCTGTTGCAA CCGTTG TTTGTT CGACGG TTTTTCGTTTTGCAT Ava_0654 831465 - 832664 + | major facilitator transporter TERM 748 832730 - 832781 + F 85 -9.6 -4.09685 | gap 1, opp_overlap 832739 832743 832744, overlap 832732 832738 832741 AGAACTAGTATTTGA TTTCTGAAATATACGTAGGGTGGGC ATT GCCCACCCTACAGATACTT-AGATA TTTTCAAAAATCAAA TERM 749 832732 - 832779 + F 93 -12.2 -3.64716 | gap 1, opp_overlap 832739 832743 832744, overlap 832730 832738 832741 AACTAGTATTTGATT TCTGAAATATACGTAGGGTGGGC ATT GCCCACCCTACAGATACTT-AGA TATTTTCAAAAATCA TERM 750 832738 - 832774 + F 87 -12.3 -3.28785 | opp_overlap 832739 832743 832744, overlap 832732 832730 832741 TATTTGATTTCTGAA ATATACGTAGGGTGGGC ATT GCCCACCCTACAGATAC TTAGATATTTTCAAA TERM 751 832773 - 832739 - f 100 -18 -3.55563 | opp_overlap 832738 832732 832730 832741, overlap 832743 832744 ATTTGATTTCTGAAA TATACGTAGGGTGGGC ATT GCCCACCCTACAGATA CTTAGATATTTTCAA TERM 752 832741 - 832771 + F 100 -14 -2.81509 | opp_overlap 832739 832743 832744, overlap 832738 832732 832730 TTGATTTCTGAAATA TACGTAGGGTGGGC ATT GCCCACCCTACAGA TACTTAGATATTTTC TERM 753 832769 - 832743 - f 100 -18.8 -3.24708 | opp_overlap 832741 832738 832732 832730, overlap 832739 832744 GATTTCTGAAATATA CGTAGGGTGGGC ATT GCCCACCCTACA GATACTTAGATATTT TERM 754 832768 - 832744 - f 100 -20.1 -2.54504 | opp_overlap 832741 832738 832732 832730, overlap 832743 832739 ATTTCTGAAATATAC GTAGGGTGGGC ATT GCCCACCCTAC AGATACTTAGATATT TERM 755 833471 - 833486 + G 78 -4 -5.1356 | opp_overlap 833454 CTTGGATAATTGATC CTAGAG ATAA CTTTAG TTTTTATTCCTCGAC Ava_0655 833032 - 835764 + | hypothetical protein TERM 756 836083 - 836062 - T 100 -8 -5.47821 | opp_overlap 836062 836075 ACCTACGGAAAAAAA GACCAGCT TCCCAC AGCTGGCC TAGTTGATTCTTTTA TERM 757 836237 - 836219 - T 70 -2.5 -5.10497 | gap 1, overlap 836223 AATTTACCGAAAAAA GATATACC CGGA GGTA-ATC AGCTTCTATCTTTCA Ava_0656 837203 - 836304 - | Alpha/beta hydrolase fold TERM 758 838150 - 838180 + G 70 -5.5 -4.51799 | gap 1, opp_overlap 838168 TAATACTTTATTATC GGTCACAG-TTGAG AACA TTCACTCTGTGACC TTTTGTGCATTTGAT Ava_0657 837632 - 838234 + | hypothetical protein Ava_0658 838511 - 839281 + | hypothetical protein Ava_0659 840221 - 839475 - | cell division ATP-binding protein FtsE TERM 759 840378 - 840344 - R 77 -10 -3.19192 | CTCGACGGAACCTAA CCCCAATCCCTTCCCT ACA AGGGAAGGGGCTGAAA ATCTATAACTGAGTA TERM 760 840415 - 840437 + r 100 -19.2 -3.53761 | opp_overlap 840407, overlap 840403 AATCAGAGTTTTAAG CCTCTCCCCG CGT CGGGGAGAGG TTTGGAGAGGGGTTC TERM 761 840519 - 840487 - R 75 -5.6 -4.74504 | overlap 840490 ACGTTAACTTAAAAA TAAGGATTCCCAAA TCATG CCTGGGAATCCCAA AACCGAAACTCAAAA TERM 762 840516 - 840490 - R 91 -9.5 -4.47888 | overlap 840487 TTAACTTAAAAATAA GGATTCCCAAA TCATG CCTGGGAATCC CAAAACCGAAACTCA Ava_0660 841345 - 840593 - | N-acetylmannosaminyltransferase Ava_0661 841973 - 842692 + | two component LuxR family transcriptional regulator TERM 763 843353 - 843370 + G 72 -9.9 -2.73875 | opp_overlap 843349, overlap 843349 AGATTATGAGAGTAT GCTGCAA AAAA TTGCAGC TACTATTGGACAAAC TERM 764 843768 - 843753 - g 71 -4.7 -4.63592 | CTGCAAGAAAAACAA CAGCA AATTAG TGCTG AGTTAGAAGTGGCGC Ava_0662 842862 - 844535 + | response regulator receiver (CheY) and GAF modulated Serine phosphatase Ava_0663 844539 - 844967 + | putative anti-sigma regulatory factor (Ser/Thr protein kinase) Ava_0664 845262 - 846431 + | hypothetical protein Ava_0665 847525 - 846530 - | hypothetical protein TERM 765 846694 - 846721 + g 100 -9.8 -5.0133 | gap 1, opp_overlap 846678 CACGGGGGCCACCAC CGCCG-CCGCCTT TAA ACGGTGGTCGGCG TTTTTTGGGCAAGTC TERM 766 847551 - 847564 + H 73 -6.7 -4.2558 | opp_overlap 847551 TGCGGCGGAGACACA TCCCA ATTA TGGGA TTTTACTAAAGCATC Ava_0666 847904 - 848785 + | TPR repeat-containing protein Ava_0667 849552 - 848851 - | hypothetical protein TERM 767 849406 - 849429 + g 75 -10.4 -2.83449 | opp_overlap 849402 849405, overlap 849403 CATTGCCAAGATCAT GGCGATGAAA AAAG TTTTATCGCC TAGTTCTGAAACTGT TERM 768 849622 - 849649 + H 70 -6.4 -4.07885 | gap 1, overlap 849612 TGAACCAGGCTCATC GCCAGTATGT-TG ATC CAGATGTACTGGC TTTTGCCAGCAGCTA Ava_0668 849761 - 850669 + | 3'-5' exonuclease Ava_0669 850898 - 852361 + | peptidase S13, D-Ala-D-Ala carboxypeptidase C Ava_0670 852743 - 853213 + | hypothetical protein TERM 769 853284 - 853313 + T 70 -8.7 -3.08798 | gap 1, opp_overlap 853283 CTTAATTAAAACAGG GTCAACGA-TGAGC AAA GCTGAATCGTTGAC TATTGGCTGGGAACT argJ 854512 - 853349 - | bifunctional ornithine acetyltransferase/N-acetylglutamate synthase protein Ava_0672 854623 - 854826 + | hypothetical protein TERM 770 855409 - 855378 - g 71 -4.6 -4.65895 | TGTCTCAGGGAAAAA TTTTGGTTTTGTGA TTCA TGACAAAATCAAAA TGAAAGTTCATAGTT Ava_0673 854890 - 856353 + | AAA ATPase, central region Ava_0674 856459 - 856776 + | hypothetical protein Ava_0675 856776 - 857168 + | hypothetical protein Ava_0676 858774 - 857263 - | threonine dehydratase TERM 771 857618 - 857630 + g 79 -7.7 -4.37092 | CATTCTGCAAAAGTC TCCAC CAT GTGGA TTTTGTCAGCACGGT TERM 772 858990 - 858946 - H 76 -7.9 -4.08692 | CAAGGGTTTGGAAAA GGCTGTAGTGGTGTAAATGTT TGA AACCCTTACACCCCTATACCC TTACACCCAGTCTCG TERM 773 859764 - 859787 + G 77 -3.7 -5.23316 | overlap 859766 ACTAGAATAAATGCG TACGGCGCG ACTAAC CCCGCCGAA TTTTTTGCTGTAGTG Ava_0677 859083 - 859901 + | hypothetical protein Ava_0678 860457 - 859960 - | hypothetical protein TERM 774 860081 - 860061 - G 87 -4.7 -5.56372 | overlap 860075 860076 AAAGGAAAATAAAAA CAACAGAAA ATA TACCTGTTG AACAGATGCAACTAC TERM 775 860592 - 860604 + H 78 -5.5 -4.9138 | CCTACTCATTCTTTT CTTGC ATC GCAGG TTTTCTTTGGATCAT TERM 776 861010 - 861034 + G 71 -4.9 -4.58395 | opp_overlap 861010 861008, overlap 861012 ACTCAACAAAAATTA CACCGCCAAAA TTA TGTTGGTGGCG TTTTTAGGGACTCAC Ava_0679 860942 - 862672 + | diguanylate cyclase/phosphodiesterase Ava_0680 862995 - 862669 - | hypothetical protein TERM 777 862756 - 862777 + g 100 -6.7 -5.86061 | gap 1, opp_overlap 862752 862754 862758 CACAAAAAATGTATA GATGCCATAT TGA AT-TGGCATC TTTTTTTTGCTACGA Ava_0681 864167 - 863130 - | twin-arginine translocation pathway signal TERM 778 864425 - 864415 - R 74 -4 -5.14965 | ATCTTCATCAAAAAA TTGT ATC ACAA CAAAGGTTTTAACAA cls 865745 - 864420 - | cardiolipin synthetase Ava_0683 865787 - 867412 + | hypothetical protein Ava_0684 868405 - 867569 - | hypothetical protein Ava_0685 868678 - 869541 + | Alpha/beta hydrolase fold Ava_0686 869853 - 870311 + | pentapeptide repeat-containing protein TERM 779 870470 - 870494 + F 95 -11.5 -4.65933 | TATAGCTAAAGGCGA GACGTAGTGAT ATT GTCACTGCGTC TTTGTTTTGAGCATC TERM 780 870601 - 870584 - f 70 -2.8 -5.07567 | overlap 870590 TGAGATGTCAAAAAA TGTAAA GTAATA TTTACA ACCAATATGAAACCT TERM 781 870697 - 870711 + G 73 -7.2 -4.09739 | CAAATCCTGTTAGCT GATAGT CTG ACTATC TTTTGGGGAGATTGG Ava_0687 870628 - 871455 + | hypothetical protein Ava_0688 871550 - 872008 + | hypothetical protein Ava_0689 872152 - 872619 + | acetyltransferase Ava_0690 873179 - 872691 - | NADH dehydrogenase I subunit N TERM 782 873613 - 873601 - H 76 -6.3 -4.63179 | opp_overlap 873601 AAAGAACAAGCAAAA CCTTA AGC TAAGG TTGAATTTGTTTAGT rplC 874067 - 874702 + | 50S ribosomal protein L3 TERM 783 874872 - 874849 - g 75 -7.4 -4.32678 | gap 1, overlap 874846 874850 874851 TTGCCAAAGAAACAA CGGCGGCGCAC ATC GTACACCGC-G CCCTAGTTAGACAAC TERM 784 874871 - 874851 - g 76 -11.1 -2.50607 | overlap 874849 874850 874846 GCCAAAGAAACAACG GCGGCGCAC ATC GTACACCGC GCCCTAGTTAGACAA rplD 874767 - 875399 + | 50S ribosomal protein L4 TERM 785 875657 - 875641 - g 74 -6.5 -4.46073 | overlap 875637 875643 CCCCAATATAAGAAA GCGATCG TCA CTATCGC CCCTGGGGACGTAGA rplW 875392 - 875706 + | 50S ribosomal protein L23 rplB 875713 - 876576 + | 50S ribosomal protein L2 TERM 786 876760 - 876744 - g 75 -3 -5.2197 | GACAAAAATGAAAAA CAAGTC ATTAA AACTTG GTCAAGAGCTTCCAC rpsS 876660 - 876938 + | 30S ribosomal protein S19 TERM 787 876999 - 876949 - f 79 -11.2 -3.04322 | GGTAAGTTGTCAATA GTCAGTAGTCGGCTGTCAGTAGGT GAA AACAACTGACAACGAACAACTGAC AACTGACAAAATTGG rplV 877023 - 877382 + | 50S ribosomal protein L22 rpsC 877435 - 878217 + | 30S ribosomal protein S3 rplP 878316 - 878744 + | 50S ribosomal protein L16 TERM 788 878840 - 878826 - g 100 -8.6 -5.00884 | ACTGCTGTCAAAAAA CAACTG TTT CAGTTG CGCTTGCAAAAGGCC rpmC 878748 - 878972 + | 50S ribosomal protein L29 rpsQ 878985 - 879230 + | 30S ribosomal protein S17 TERM 789 879230 - 879249 + F 74 -8 -3.85698 | CAACACCAAAGCTTA GTTGTTAT AAAA ATAACAAC TTTATAAGGGAGACC rplN 879269 - 879637 + | 50S ribosomal protein L14 rplX 879637 - 879990 + | 50S ribosomal protein L24 rplE 880097 - 880645 + | 50S ribosomal protein L5 rpsH 880666 - 881067 + | 30S ribosomal protein S8 rplF 881164 - 881712 + | 50S ribosomal protein L6 rplR 881715 - 882077 + | 50S ribosomal protein L18 rpsE 882156 - 882680 + | 30S ribosomal protein S5 rplO 882749 - 883195 + | 50S ribosomal protein L15 TERM 790 883481 - 883510 + G 70 -7.9 -3.66666 | overlap 883486 GGATATATTTTCAGG GCGAGGACTTTCA ACTT TGGGAGTCTTTGC TTTAGGGATTTTGCC secY 883266 - 884579 + | preprotein translocase subunit SecY adk 884579 - 885133 + | adenylate kinase TERM 791 885337 - 885324 - f 81 -5.3 -5.18357 | opp_overlap 885324 GAATTGAGGAAAAAA CTTGT CTAA ACAAG ATTTGATTGAAATGG infA 885325 - 885549 + | translation initiation factor IF-1 TERM 792 885586 - 885598 + F 76 -7.7 -4.0075 | opp_overlap 885577 885585 885582 ATAAAACAAATTATT TGGGT GTT ACCCA TTTACTTAATTGCAT rpmJ 885666 - 885779 + | 50S ribosomal protein L36 rpsM 885893 - 886273 + | 30S ribosomal protein S13 Ava_0714 886328 - 886723 + | 30S ribosomal protein S11 TERM 793 886739 - 886770 + F 93 -13.2 -3.03159 | gap 1, overlap 886719 GTCAAGACTTTTGTT CTCACCTGCAATTGC TTG GCAATTG-GGGTGAG TGTTCAAGAACTTCC Ava_0715 887014 - 887961 + | DNA-directed RNA polymerase subunit alpha rplQ 887997 - 888347 + | 50S ribosomal protein L17 truA 888431 - 889279 + | tRNA pseudouridine synthase A rplM 889353 - 889808 + | 50S ribosomal protein L13 rpsI 889808 - 890224 + | 30S ribosomal protein S9 rpmE 890325 - 890564 + | 50S ribosomal protein L31 TERM 794 890582 - 890616 + F 81 -5.7 -5.14563 | gap 1, opp_overlap 890588, overlap 890587 890588 GTTTGGCTCTGCTGT TAACGA-CGACCCTGC ATTT GCTGGGTCGATTGTCA TTTTTTGCTGAGCCA TERM 795 890587 - 890610 + F 74 -8 -3.82478 | opp_overlap 890588, overlap 890582 890588 GCTCTGCTGTTAACG ACGACCCTGC ATTT GCTGGGTCGA TTGTCATTTTTTGCT TERM 796 890609 - 890588 - f 81 -11.5 -2.70932 | opp_overlap 890587 890582 890588 CTCTGCTGTTAACGA CGACCCTGC ATTT GCTGGGTCG ATTGTCATTTTTTGC TERM 797 890588 - 890609 + F 82 -11.5 -2.8786 | opp_overlap 890588, overlap 890587 890582 CTCTGCTGTTAACGA CGACCCTGC ATTT GCTGGGTCG ATTGTCATTTTTTGC prfA 890667 - 891767 + | peptide chain release factor 1 TERM 798 891795 - 891815 + F 100 -9 -5.48213 | opp_overlap 891795 TAAATTATGTTTAAA CCGTCTGT GGGTA ACAGGCGG TTTTTGTTTTGACTC TERM 799 892300 - 892280 - f 71 -4.8 -4.62772 | gap 1, opp_overlap 892278 892280 TGCAAATCAAACAAA CAGCACTCA GGAT TGA-TGCTG TGTTTGTGCCTACAG TERM 800 893751 - 893763 + G 76 -7.7 -4.15044 | opp_overlap 893748 893750 893751 TCTTAATTGAAAGAG GCGAT CGC ATCGC TTTCTTAGGCCCCAA TERM 801 893912 - 893890 - g 70 -5.6 -4.26076 | TTACTTTGAGCAAAA TCAAGCCGAA GCT TTGGACTTGA AAAAAACTGTTATGG Ava_0722 892703 - 894397 + | ABC transporter-like Ava_0723 894644 - 896245 + | phosphoglyceromutase TERM 802 896294 - 896246 - f 89 -12 -3.34344 | gap 1, opp_overlap 896255, overlap 896260 GTAGGTCTTAATTAA GCT-ATGAGAGAATAGTTAACTG TTAA CCGTCAACTGTTCTCTCATCAGC AAACCCTCCTTTTTT secG 896338 - 896571 + | preprotein translocase subunit SecG Ava_0725 896592 - 897356 + | peptidase, metallopeptidase Ava_0726 898021 - 897395 - | hypothetical protein Ava_0727 899201 - 898053 - | glycosyl transferase, group 1 TERM 803 899327 - 899352 + r 72 -9.2 -2.7035 | opp_overlap 899338 899351, overlap 899300 899325 TTTGAGCCGCGTACT GAGTTTAAAG ATTAAC CTTTAAACTC TAGTCTCTAAATGCC Ava_0728 901264 - 899633 - | major facilitator transporter recO 902141 - 901251 - | DNA repair protein RecO Ava_0730 903014 - 902334 - | deoxyribose-phosphate aldolase Ava_0731 904362 - 903205 - | C-5 cytosine-specific DNA methylase Ava_0732 905963 - 904518 - | hypothetical protein TERM 804 904834 - 904805 - G 73 -8.7 -3.48696 | opp_overlap 904804 904805 TGAGAACAATACCAA TGGCTTTAGTAGA AAGT TCCACTAAACCCA ATTTCAGCATCAAAC TERM 805 906051 - 906016 - R 100 -16.4 -5.16132 | opp_overlap 906021, overlap 906021 TAGATCAAAATAAAA CAAAACCCCACAATCT TCAA AGATTGTGAGGTTCTG CTGCTTATAAGTTGG TERM 806 906021 - 906046 + r 82 -10.5 -3.48684 | opp_overlap 906016 906021 CAAAATAAAACAAAA CCCCACAATCT TCAA AGATTGTGAGG TTCTGCTGCTTATAA TERM 807 906046 - 906021 - R 100 -12.7 -5.40279 | opp_overlap 906021, overlap 906016 CAAAATAAAACAAAA CCCCACAATCT TCAA AGATTGTGAGG TTCTGCTGCTTATAA Ava_0733 907143 - 906190 - | L-asparaginase II Ava_0734 907723 - 907223 - | hypothetical protein Ava_0735 908178 - 907720 - | Iojap-related protein TERM 808 908685 - 908652 - R 70 -3.1 -5.04597 | overlap 908654 ATTCAGACACAAAAA TAGGGCTAAGGAGAT ACAA ATATCCTCAACCCCC AGAACTTACAACTAA TERM 809 908683 - 908654 - R 76 -7.9 -4.14422 | overlap 908652 TCAGACACAAAAATA GGGCTAAGGAGAT ACAA ATATCCTCAACCC CCAGAACTTACAACT Ava_0736 910004 - 908733 - | glycosyl transferase, group 1 TERM 810 909734 - 909721 - G 75 -3.1 -5.09225 | overlap 909722 AGGGCAGGTAAAAAA CTCGT AACT ACGAA ACTAGCATCTAGTAA TERM 811 909772 - 909813 + g 71 -2.4 -5.1764 | opp_overlap 909782, overlap 909782 TCTAATAATTTCGGT TGGGGACG-AATCCACACGT AACT ACGT-TGGATTTTGACACCA TTTTTATATTCTGTA TERM 812 910607 - 910588 - R 74 -7.9 -3.94333 | AATTCAAAATTCAAA GTAGCCT ACGGCA AGGCTAC ACCAACAAAATTCAA Ava_0737 911575 - 910835 - | ABC transporter-like Ava_0738 912741 - 911596 - | amino acid ABC transporter permease TERM 813 912071 - 912057 - G 74 -4.3 -4.99043 | GTGCGAGAAATAAAA TTCCA ATTAG TGGAA CTCCCCGAATAATTT Ava_0739 913705 - 912779 - | amino acid ABC transporter permease TERM 814 913649 - 913638 - G 71 -4.4 -4.89063 | overlap 913646 GCAGCTAAAAATAAA GCAA TCAA TTGC CCAGCAATATACCAG Ava_0740 914837 - 913767 - | extracellular solute-binding protein Ava_0741 915329 - 915886 + | hypothetical protein Ava_0742 916073 - 916711 + | hypothetical protein Ava_0743 917740 - 916946 - | radical SAM family protein TERM 815 918241 - 918202 - g 71 -9.4 -2.97768 | gap 1, opp_overlap 918201, overlap 918201 TAAAGAAAAAGGAAT TGTCATGATCCTGCGGAAT GTC ACTCCTCAGG-TCATGGCA GTATTAAACCTCACC TERM 816 918605 - 918593 - g 87 -6.3 -5.15969 | GCGGAAGCGAAAAAA TCTCA AGT TGAGA ACCAGGTACAGGGGG Ava_0744 917927 - 918982 + | anti-sigma-factor antagonist (STAS) and sugar transfersase TERM 817 919057 - 919090 + F 100 -8.3 -5.45652 | opp_overlap 919053 919060 919063, overlap 919060 919088 ATTTTGTAAAATCAC CAAGAATCTCTGATG AGAA TATCAGGGATTCTTA TTTTTTATTAAAAAT TERM 818 919060 - 919087 + F 100 -10 -4.81306 | opp_overlap 919053 919060 919063, overlap 919057 TTGTAAAATCACCAA GAATCTCTGATG AGAA TATCAGGGATTC TTATTTTTTATTAAA Ava_0745 919360 - 920253 + | hypothetical protein TERM 819 921999 - 922030 + G 93 -8.8 -4.56978 | gap 1 AATTTATTTTTTGGT GCATTAGCCA-GTCA AGT TGGCGTGGCAAATGC TTTATTGTTTGGCGG Ava_0746 920841 - 922136 + | hypothetical protein TERM 820 922202 - 922175 - T 100 -7.1 -5.86465 | AATAATATAAAAAAA GCTCACAAG TCATAAACAT CTTGTGAGC GAATAAATTATTCAG Ava_0747 923604 - 922282 - | CO2 hydration Ava_0748 925173 - 923671 - | NAD(P)H-quinone oxidoreductase subunit M TERM 821 925302 - 925290 - R 75 -5.5 -4.82855 | overlap 925282 CATCAAATCCAAAAA CTGGA ATC CCCAG AAAGGCCAAGTCACC Ava_0749 927131 - 925269 - | NAD(P)H-quinone oxidoreductase subunit F TERM 822 927639 - 927629 - g 78 -5.4 -5.0133 | overlap 927610 TATCGCTTTAAAAAA CGTT TAG AACG AGCGCGGATATATTC Ava_0750 927545 - 928378 + | SWIM Zn-finger TERM 823 928542 - 928563 + T 74 -5.1 -4.86939 | gap 1, opp_overlap 928533 928529, overlap 928533 CACAAAGGCAATCAA GCGG-GAAGA ATA TCTACACCGC TTTTTGCCTTTATTG Ava_0751 928758 - 928573 - | hypothetical protein Ava_0752 929021 - 928911 - | sporulation-control protein Spo0M-like TERM 824 929148 - 929164 + H 72 -8.1 -3.55487 | opp_overlap 929143 929154 929155, overlap 929154 929155 TTAAAAAAATGTTCA GTAAAAC CAA GTTTTAC TTGTACTTGGTGTAA Ava_0753 929258 - 930610 + | pentapeptide repeat-containing protein Ava_0754 931392 - 930622 - | methionine aminopeptidase TERM 825 931319 - 931343 + g 85 -4.1 -5.56264 | overlap 931320 931321 TGTTGCAGAAGTTTA GCCGCCAAGCG TCC CGCTTGCCGCA TTTTTTCTATTTCCC TERM 826 931320 - 931342 + g 74 -7.6 -3.92132 | overlap 931319 931321 GTTGCAGAAGTTTAG CCGCCAAGCG TCC CGCTTGCCGC ATTTTTTCTATTTCC TERM 827 931321 - 931341 + g 79 -11.1 -2.93652 | overlap 931320 931319 TTGCAGAAGTTTAGC CGCCAAGCG TCC CGCTTGCCG CATTTTTTCTATTTC Ava_0755 932387 - 931398 - | homoserine dehydrogenase, NAD-binding Ava_0756 932780 - 933079 + | ferredoxin (2Fe-2S) TERM 828 933099 - 933146 + T 88 -3.4 -5.95166 | gap 1, opp_overlap 933101 933103 933105, overlap 933105 CAAGTTAGCTTTAAA AATAGAGGCTAGAGGCTAG-CAG CTA CAGACTAGTCCCTAGCCTTTCTA TTTTTTTTCATTAGG TERM 829 933123 - 933101 - T 71 -4.8 -4.60041 | opp_overlap 933099 933105, overlap 933103 933105 AGTTAGCTTTAAAAA TAGAGGCTAG AGG CTAGCAGCTA CAGACTAGTCCCTAG TERM 830 933140 - 933105 - T 75 -9 -3.54256 | gap 1, opp_overlap 933099 933105, overlap 933101 933103 AGCTTTAAAAATAGA GGCTAGAGGCTAG-CAG CTA CAGACTAGTCCCTAGCC TTTCTATTTTTTTTC TERM 831 933105 - 933140 + T 100 -9 -4.77795 | gap 1, opp_overlap 933101 933105 933103, overlap 933099 AGCTTTAAAAATAGA GGCTAGAGGCTAG-CAG CTA CAGACTAGTCCCTAGCC TTTCTATTTTTTTTC Ava_0757 935067 - 933400 - | amidase enhancer Ava_0758 935182 - 935445 + | sulfiredoxin Ava_0759 935566 - 936057 + | Ferritin and Dps TERM 832 936561 - 936504 - g 77 -8.6 -3.94811 | opp_overlap 936512 936516 936517, overlap 936506 936515 936517 AACAGCAGCGAGAAA TATTACAGCAACAGTTCCAGCAGTCG AGTTTA CAACTGCTGGAACCTTTGTTATTACA ATGGCCGACAGCTGC TERM 833 936559 - 936506 - g 73 -9 -3.55824 | opp_overlap 936512 936516 936517, overlap 936504 936515 936517 CAGCAGCGAGAAATA TTACAGCAACAGTTCCAGCAGTCG AGTTTA CAACTGCTGGAACCTTTGTTATTA CAATGGCCGACAGCT TERM 834 936512 - 936553 + G 82 -10.2 -3.65046 | opp_overlap 936506 936504 936515 936517, overlap 936516 936517 CGAGAAATATTACAG CAACAGTTCCAGCAGTCG AGTTTA CAACTGCTGGAACCTTTG TTATTACAATGGCCG TERM 835 936550 - 936515 - g 78 -10.5 -3.33798 | opp_overlap 936512 936516 936517, overlap 936506 936504 936517 GAAATATTACAGCAA CAGTTCCAGCAGTCG AGTTTA CAACTGCTGGAACCT TTGTTATTACAATGG TERM 836 936516 - 936549 + G 95 -9.6 -4.45738 | opp_overlap 936515 936506 936504 936517, overlap 936512 936517 AAATATTACAGCAAC AGTTCCAGCAGTCG AGTTTA CAACTGCTGGAACC TTTGTTATTACAATG TERM 837 936548 - 936517 - g 100 -15.3 -3.22516 | opp_overlap 936516 936512 936517, overlap 936515 936506 936504 AATATTACAGCAACA GTTCCAGCAGTCG AGTTTA CAACTGCTGGAAC CTTTGTTATTACAAT TERM 838 936517 - 936548 + G 100 -13.1 -3.2672 | opp_overlap 936517 936515 936506 936504, overlap 936516 936512 AATATTACAGCAACA GTTCCAGCAGTCG AGTTTA CAACTGCTGGAAC CTTTGTTATTACAAT Ava_0760 936194 - 936838 + | hypothetical protein Ava_0761 937066 - 937635 + | hypothetical protein Ava_0762 938846 - 937704 - | Serine/threonine protein kinase Ava_0763 939135 - 940925 + | small GTP-binding protein domain-containing protein TERM 839 940970 - 940955 - f 87 -11.8 -3.58269 | opp_overlap 940955 TAATTGATTTGGAAA GCCCGC TAAT GCGGGC TTTTTTAGTTGACGA TERM 840 940955 - 940970 + F 100 -11.8 -5.26875 | opp_overlap 940955 TAATTGATTTGGAAA GCCCGC TAAT GCGGGC TTTTTTAGTTGACGA Ava_0764 941060 - 941815 + | hypothetical protein Ava_0765 941990 - 942211 + | hypothetical protein TERM 841 942498 - 942510 + G 70 -7.7 -3.69354 | opp_overlap 942498 CATCATCACACGCAA CGATG GGA CATCG TTTAAAATTGTGCCG Ava_0766 942406 - 942633 + | prevent-host-death protein TERM 842 942717 - 942707 - g 79 -3.2 -5.24989 | TGACACAGCAAAAAA CCTC ATT GAAG ATCAGCGAAATCAAA Ava_0767 942630 - 943016 + | PilT protein-like Ava_0768 943185 - 943406 + | hypothetical protein TERM 843 943713 - 943701 - g 72 -6.3 -4.31688 | overlap 943702 AACATCAAGTTAAAA TGACT GAT AGTCA GCCTGATGAAAGGCT Ava_0769 943592 - 943852 + | hypothetical protein Ava_0770 943849 - 944259 + | hypothetical protein Ava_0771 944755 - 944348 - | hypothetical protein TERM 844 945263 - 945253 - g 74 -4 -5.03145 | GAATTTGCTAAAAAA TTAG CTG CTAA TGCTGATTTCTACGT pgk 944845 - 946047 + | phosphoglycerate kinase Ava_0773 946156 - 946773 + | NUDIX hydrolase Ava_0774 946843 - 947754 + | extracellular solute-binding protein Ava_0775 948986 - 947811 - | FO synthase subunit 2 TERM 845 949864 - 949878 + G 73 -5.7 -4.45664 | TTAGACCGGAGTTTC TTGCC CTAGT GGCAA TTTTAATTCCCTTAG Ava_0776 949242 - 950828 + | hypothetical protein TERM 846 951084 - 951094 + F 72 -4 -4.9725 | CTTGCCGCGCCACTA TATC TTT GATA TTTTTATCTGGAAAT TERM 847 951921 - 951932 + G 78 -5.8 -4.84274 | TGTGGACAACACTCA GTGC TGCT GCAC TTTTTCATCTGATTA TERM 848 952031 - 952042 + G 78 -2.2 -5.48028 | GGTTCCATAGCTGCT GGTT TGTT GACC TTTTATTTTTATTTA TERM 849 952204 - 952184 - g 82 -10.5 -3.72576 | opp_overlap 952188, overlap 952188 TGGGGGGGTATCAAA CAAATCCGC AGT GCAGATTTG CAAAGATTTGGTAGT TERM 850 952200 - 952188 - g 70 -5.5 -4.49556 | opp_overlap 952188, overlap 952184 GGGGTATCAAACAAA TCCGC AGT GCAGA TTTGCAAAGATTTGG Ava_0777 951365 - 953059 + | hypothetical protein Ava_0778 953878 - 955122 + | glycosyl transferase family protein Ava_0779 955322 - 956995 + | hypothetical protein Ava_0780 958340 - 957078 - | S-adenosylmethionine synthetase TERM 851 958576 - 958557 - R 100 -12.2 -5.4251 | CGTAGATACAAAAAA GGGGTACT CGTA AGTACCCC AGAAGTTTTGACACA Ava_0781 959608 - 958604 - | phosphoribulokinase TERM 852 958713 - 958692 - G 74 -4.4 -5.04987 | opp_overlap 958710, overlap 958710 AATACTTGGAAAAAA CCAGTTCC GTTGTT AGAACCGG GATATTCACGGTGTT TERM 853 960279 - 960269 - H 72 -8.2 -3.53012 | opp_overlap 960268 GCTGGGTGCTGTAAA GCCC TGT GGGC CTAGTTGTGCTTAGA Ava_0782 960777 - 962099 + | oxidoreductase FAD/NAD(P)-binding TERM 854 962183 - 962217 + F 91 -10 -4.61868 | opp_overlap 962185 962186, overlap 962186 CTAACAAAATTGATG AATTTGTAGGGTGGGC AGT GCCGACCCTACAATTG TTTTGTATATAAATA TERM 855 962215 - 962185 - f 93 -12.6 -3.2946 | opp_overlap 962183 962186, overlap 962186 AACAAAATTGATGAA TTTGTAGGGTGGGC AGT GCCGACCCTACAAT TGTTTTGTATATAAA TERM 856 962186 - 962214 + F 100 -16.1 -4.41422 | opp_overlap 962185 962186, overlap 962183 ACAAAATTGATGAAT TTGTAGGGTGGGC AGT GCCGACCCTACAA TTGTTTTGTATATAA TERM 857 962214 - 962186 - f 100 -16.1 -2.56591 | opp_overlap 962186 962183, overlap 962185 ACAAAATTGATGAAT TTGTAGGGTGGGC AGT GCCGACCCTACAA TTGTTTTGTATATAA Ava_0783 962323 - 963612 + | homoserine dehydrogenase TERM 858 963705 - 963671 - T 100 -14.4 -4.49556 | opp_overlap 963682, overlap 963672 963674 GTTGCACCAAATAAA TGATGTAGAGACGTTG ATG CAACGTCTCTACAGCC CAGAATAAAACACAT TERM 859 963704 - 963672 - T 100 -17.9 -3.29252 | opp_overlap 963682, overlap 963671 963674 TTGCACCAAATAAAT GATGTAGAGACGTTG ATG CAACGTCTCTACAGC CCAGAATAAAACACA TERM 860 963702 - 963674 - T 100 -19.1 -3.20639 | opp_overlap 963682, overlap 963672 963671 GCACCAAATAAATGA TGTAGAGACGTTG ATG CAACGTCTCTACA GCCCAGAATAAAACA TERM 861 963792 - 963768 - T 100 -13 -5.52986 | opp_overlap 963768 AGCGCAGTAAAAAAA TGACCAAGCA GACTA TGCTTGGTCA TTTCTCTTATAAAAC TERM 862 963768 - 963792 + T 95 -13 -4.27117 | opp_overlap 963768 AGCGCAGTAAAAAAA TGACCAAGCA GACTA TGCTTGGTCA TTTCTCTTATAAAAC Ava_0784 964271 - 963840 - | hypothetical protein TERM 863 964493 - 964471 - H 76 -4.8 -4.93318 | opp_overlap 964465, overlap 964458 964456 TAGAAGTCAGAAAAA TGCGGAATGT AAT ACAATCAGCA CCTTTCTAAATTCTG Ava_0785 965144 - 965683 + | hypothetical protein Ava_0786 966161 - 967396 + | hypothetical protein Ava_0787 967441 - 968145 + | peptidase M15D, vanX D-ala-D-ala dipeptidase Ava_0788 968627 - 968154 - | TspO and MBR related proteins Ava_0789 969190 - 968717 - | TspO and MBR related proteins Ava_0790 969404 - 970021 + | hypothetical protein Ava_0791 970127 - 970504 + | response regulator receiver domain-containing protein Ava_0792 970501 - 971931 + | periplasmic sensor Signal transduction histidine kinase murD 973315 - 971948 - | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase glyS 975550 - 973400 - | glycyl-tRNA synthetase subunit beta TERM 864 976697 - 976719 + G 76 -10 -3.27382 | opp_overlap 976697, overlap 976695 976702 AAATGAATGAAGTTA TGAAACTACT GAC AGTGGTTTCA TCTATCTTTATTCCC Ava_0795 975784 - 976926 + | magnesium/cobalt transporter CorA TERM 865 977394 - 977380 - g 74 -4.2 -5.01732 | AATTGTTCCAAAAAA GACACT AAC AGAGTC AATTACAGCCGAAGA TERM 866 977476 - 977456 - g 75 -3.4 -5.09895 | gap 1 TATTCAGCGAAAAAA CCCT-TAAT TAAT ATTACAGGG TTACAAAAAGGCGGG TERM 867 977496 - 977486 - g 74 -4.6 -4.84761 | overlap 977487 977488 ACAGGGTTACAAAAA GGCG GGC CACC CCAGAAAAAATTGCA Ava_0796 976988 - 977695 + | hypothetical protein TERM 868 977899 - 977933 + F 73 -8.9 -3.30441 | opp_overlap 977899 977900, overlap 977897 977900 977906 ATTCAAAATTCAAAA TTCAAAATTCAAAAT GAATA ATTTTGGATTTTGAG TCTTAGTTATGAATT TERM 869 977900 - 977932 + F 73 -10.2 -2.57541 | opp_overlap 977900 977899, overlap 977899 977897 977906 TTCAAAATTCAAAAT TCAAAATTCAAAAT GAATA ATTTTGGATTTTGA GTCTTAGTTATGAAT TERM 870 977988 - 977970 - f 75 -8.8 -3.57561 | TGGTAAGGGTGCAAA GGTGCGGT AAG AGCGCACC AGCAGTATCGAGAGG Ava_0797 978356 - 979084 + | ribonuclease III TERM 871 979245 - 979291 + F 76 -10.3 -2.72511 | opp_overlap 979250 979252, overlap 979252 TCAGGGCTGTCCATA GTCAAGAGTCCAGAGTCAAAG GCTAG CTTTAACTGTGGACTTTGGAC CTTTGACAACCTGAG TERM 872 979284 - 979252 - f 77 -10 -3.12327 | opp_overlap 979245 979252, overlap 979250 TGTCCATAGTCAAGA GTCCAGAGTCAAAG GCTAG CTTTAACTGTGGAC TTTGGACCTTTGACA TERM 873 980268 - 980251 - g 71 -6.9 -4.14257 | overlap 980254 TTGAATAATGATAAA CAGCGCC GTCT GGCGGTG GTAGGAAGCCTTGGC Ava_0798 979441 - 980568 + | semialdehyde dehydrogenase, NAD - binding Ava_0799 981518 - 980703 - | histidine kinase TERM 874 981482 - 981500 + g 73 -9 -3.45054 | overlap 981485 TTTCATCTGCACGCT GAAGAAAT TCT ATTTCTTC TTCTCGATTATCACA Ava_0800 981653 - 982036 + | transposase Ava_0801 982078 - 982446 + | transposase IS4 Ava_0802 983669 - 982443 - | histidine kinase, HAMP region TERM 875 984509 - 984530 + G 71 -4.5 -4.59773 | opp_overlap 984506, overlap 984505 984510 TTTTGGCAAGGACGC TCAGAATTT GAGC GAATTCTGG TTTTTGAAACTCCAA Ava_0803 984143 - 984826 + | bifunctional deaminase-reductase-like TERM 876 984967 - 984929 - g 73 -5.2 -4.71426 | opp_overlap 984931 984937, overlap 984930 984931 984940 TTTGGATTAACAAAA TCGCTGAAGTACCCCAAG ATG CTTGGGATGCTTTAGCTT TACCACTCAAAACTC TERM 877 984966 - 984930 - g 73 -8.7 -3.42374 | opp_overlap 984931 984937, overlap 984929 984931 984940 TTGGATTAACAAAAT CGCTGAAGTACCCCAAG ATG CTTGGGATGCTTTAGCT TTACCACTCAAAACT TERM 878 984965 - 984931 - g 83 -12.2 -2.64942 | opp_overlap 984931 984937, overlap 984930 984929 984940 TGGATTAACAAAATC GCTGAAGTACCCCAAG ATG CTTGGGATGCTTTAGC TTTACCACTCAAAAC TERM 879 984931 - 984965 + G 100 -14.4 -3.57144 | opp_overlap 984931 984930 984929 984940, overlap 984937 TGGATTAACAAAATC GCTGAAGTACCCCAAG ATG CTTGGGATGCTTTAGC TTTACCACTCAAAAC TERM 880 984937 - 984959 + G 75 -8.4 -3.84719 | opp_overlap 984931 984930 984929 984940, overlap 984931 AACAAAATCGCTGAA GTACCCCAAG ATG CTTGGGATGC TTTAGCTTTACCACT TERM 881 985226 - 985239 + G 70 -3.8 -4.86621 | CACCATTCACCCCAG CCGA AGGTTA TCGG TTTTTAATTGCCGAT Ava_0804 984880 - 986055 + | hypothetical protein Ava_0805 986243 - 986626 + | hypothetical protein Ava_0806 987450 - 986713 - | hypothetical protein Ava_0807 988505 - 987612 - | LysR family transcriptional regulator Ava_0808 988964 - 989158 + | hypothetical protein TERM 882 989227 - 989264 + T 100 -10.1 -5.36364 | opp_overlap 989238 CCATAGTTGAAACTT GAGTTGGTAAATACATT AAAA AATGTATTTATCCGCTC TTTTTGTATTTTTGA Ava_0809 989940 - 989284 - | HAD family hydrolase TERM 883 989667 - 989653 - G 73 -2.8 -5.15634 | TAGTTCACCAAAAAA GCTG GAAAAAT CAGC AAATTGGGTCAGAAC Ava_0810 991252 - 990023 - | FAD-dependent pyridine nucleotide-disulphide oxidoreductase TERM 884 990949 - 990973 + g 70 -7.1 -3.74361 | GATCGTAAGGGATTT CTGGTCCATCT TGC AGATGTACCCG TTGTTGGTCGATATC Ava_0811 991866 - 991294 - | GCN5-related N-acetyltransferase Ava_0812 992310 - 992065 - | ChaB TERM 885 992102 - 992115 + g 74 -4.5 -4.90525 | GATTTATGATGTATT GCTGA GTCT TCGGC TTTTCTTTGCCATTG TERM 886 993418 - 993404 - g 73 -5.6 -4.42206 | opp_overlap 993403 AAGGAAATTAATAAA GCCTAC CAA GAAGGC GATTTAGCAAGACTT TERM 887 993601 - 993586 - g 86 -7.6 -4.66163 | opp_overlap 993585 ACGTGTAGTGAAAAA TACACC TGAA GGTGTA ATGGTTTCCGACGCG Ava_0813 992807 - 993850 + | heat shock protein DnaJ-like Ava_0814 994028 - 995305 + | peptidase S41 Ava_0815 995447 - 996220 + | hypothetical protein Ava_0816 997763 - 996234 - | Mg chelatase-related protein TERM 888 996496 - 996509 + g 78 -5.9 -4.89393 | TGAAAGCGATTAATG GCGCG ATCG CGTGC TTTTTGTACCCTTTC TERM 889 997057 - 997081 + g 71 -4.9 -4.62069 | AAAGGTGGTAAAATC CCAGGTAAGCG CCT TGCTAACATGG TTTTTCCACTACCAG Ava_0817 997813 - 998181 + | histidine triad (HIT) protein TERM 890 998213 - 998196 - T 80 -11.3 -3.21622 | opp_overlap 998196 ATATACAGTTATTAA TCGCGTC ACTA GACGCGA TTAATAGATAAAAAT TERM 891 998196 - 998213 + T 80 -11.3 -3.18383 | opp_overlap 998196 ATATACAGTTATTAA TCGCGTC ACTA GACGCGA TTAATAGATAAAAAT TERM 892 998340 - 998367 + T 100 -17.2 -3.86252 | opp_overlap 998347 ACTTTACCCTGTACT GTAGAGACGTTG CATA CAACGTCTCTAC TTATATTTGGTGCAA Ava_0818 998907 - 998416 - | hypothetical protein TERM 893 998488 - 998507 + g 74 -8 -3.91084 | opp_overlap 998488 ATAATTTTTACACGA TGACAAAA TATC TTTTGTCA TTTGATTAGCGATAC Ava_0819 999067 - 999732 + | endonuclease V Ava_0820 999861 - 1000442 + | FHA domain-containing protein Ava_0821 1000495 - 1002453 + | FHA domain-containing protein TERM 894 1002877 - 1002863 - T 85 -2.8 -5.92399 | CAAGAAAATAAAAAA CACC AGGCTGA GGTG GATAAAGAGCAGTCA TERM 895 1003965 - 1003979 + T 75 -5.6 -4.8622 | GGTTAAGTCCCGCAA CGAGCG CAA CCCTCG TTTTTAGTTGCCAGC TERM 896 1005423 - 1005412 - T 75 -7.2 -4.2354 | GAAAGGTGAAAAGAA CCCC GCAA GGGG AGTGAAATAGAACAT TERM 897 1006243 - 1006215 - T 75 -9.5 -3.23274 | opp_overlap 1006236, overlap 1006198 1006210 TTGGTGAGAATCCAA TGCCCCGAAACCC TAA GGGTTCCAGAGCC AGGTTCGTCCACTCT TERM 898 1007610 - 1007598 - T 71 -9.1 -3.1634 | GCTGAAAGCATCTAA GTGGG AAG CCCAC CTCAAGATGAGTGCT TERM 899 1007969 - 1007925 - T 74 -10.2 -2.57931 | opp_overlap 1007925 1007936, overlap 1007936 GCCAGGTTCTATAAT TTAAGCAAAAACCCCCTTTT CGTAC AGAAGGGGGTTTTTGTTTTA TCTTATTGTGATTTC TERM 900 1007925 - 1007969 + T 100 -14.6 -3.54602 | opp_overlap 1007925 1007936, overlap 1007936 GCCAGGTTCTATAAT TTAAGCAAAAACCCCCTTTT CGTAC AGAAGGGGGTTTTTGTTTTA TCTTATTGTGATTTC TERM 901 1007958 - 1007936 - T 89 -7.7 -4.90013 | opp_overlap 1007925 1007936, overlap 1007925 TAATTTAAGCAAAAA CCCCCTTTT CGTAC AGAAGGGGG TTTTTGTTTTATCTT TERM 902 1007936 - 1007958 + T 100 -9.9 -5.60556 | opp_overlap 1007936 1007925, overlap 1007925 TAATTTAAGCAAAAA CCCCCTTTT CGTAC AGAAGGGGG TTTTTGTTTTATCTT Ava_0822 1008494 - 1007985 - | hypothetical protein Ava_0823 1009355 - 1008573 - | cyclopropane-fatty-acyl-phospholipid synthase Ava_0824 1009463 - 1010350 + | LysR family transcriptional regulator Ava_0825 1012665 - 1010347 - | exonuclease RecJ Ava_0826 1013327 - 1012686 - | GCN5-related N-acetyltransferase Ava_0827 1014248 - 1013400 - | hypothetical protein Ava_0828 1014355 - 1016559 + | diguanylate cyclase/phosphodiesterase with GAF sensor Ava_0829 1016944 - 1016741 - | hypothetical protein def 1017520 - 1016957 - | peptide deformylase Ava_0831 1018619 - 1017615 - | hypothetical protein Ava_0832 1018862 - 1018749 - | hypothetical protein TERM 903 1019080 - 1019116 + r 73 -6 -4.49556 | gap 1, opp_overlap 1019092, overlap 1019081 1019084 ATGTGCTTTATTTGT GGACTGTAGAGACATTG CATA CAACGTCTCTACA-TCA TTTATTTGGTGCAAC TERM 904 1019081 - 1019115 + r 76 -9.5 -3.29252 | gap 1, opp_overlap 1019092, overlap 1019080 1019084 TGTGCTTTATTTGTG GACTGTAGAGACATTG CATA CAACGTCTCTACA-TC ATTTATTTGGTGCAA TERM 905 1019084 - 1019113 + r 87 -12.3 -3.20639 | opp_overlap 1019092, overlap 1019081 1019080 GCTTTATTTGTGGAC TGTAGAGACATTG CATA CAACGTCTCTACA TCATTTATTTGGTGC Ava_0833 1019278 - 1019114 - | hypothetical protein Ava_0834 1019412 - 1020011 + | photosystem II oxygen evolving complex protein PsbP TERM 906 1020135 - 1020104 - T 100 -8.3 -5.252 | gap 1, opp_overlap 1020104 1020108, overlap 1020108 GATTGGCACAAAAAA TAAACTCCTTCAAT AATTA ATTGAAGGAG-TTA CTTTAAGCCTTTATT TERM 907 1020108 - 1020132 + T 87 -11.6 -3.5332 | opp_overlap 1020108 1020104, overlap 1020104 GGCACAAAAAATAAA CTCCTTCAAT AATTA ATTGAAGGAG TTACTTTAAGCCTTT TERM 908 1020132 - 1020108 - T 100 -11.6 -5.13354 | opp_overlap 1020104 1020108, overlap 1020104 GGCACAAAAAATAAA CTCCTTCAAT AATTA ATTGAAGGAG TTACTTTAAGCCTTT Ava_0835 1020769 - 1020158 - | hypothetical protein TERM 909 1020896 - 1020908 + G 82 -10.5 -3.73402 | TAGCTTCTGCTTCTC CGGCG CGT CGCCG TTTGCTCCAAACTGT TERM 910 1021373 - 1021355 - g 75 -2.4 -5.38047 | overlap 1021357 TATTTATAGAAAAAA TCGCTG GTTGTCA CAGCAA TGTTATTGGGTTGAG maf 1020859 - 1021452 + | Maf-like protein lpxD 1022687 - 1021638 - | UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase TERM 911 1022552 - 1022536 - G 78 -7.3 -4.42386 | opp_overlap 1022536 GTCTTAGCGATAAAA GATGCAA ACT TTGCACC TTCTATATAGCTGAG Ava_0838 1023727 - 1022753 - | glycosyl transferase family protein Ava_0839 1025128 - 1023857 - | polysaccharide biosynthesis protein Ava_0840 1026138 - 1025182 - | glycosyl transferase family protein TERM 912 1025445 - 1025465 + g 70 -2.5 -5.0133 | GCAAGTATAGTAGTT CTGTTGGGA CAG TCTCAAAGG TTTTTTCAAAAACTC Ava_0841 1027134 - 1026178 - | glycosyl transferase family protein TERM 913 1026827 - 1026837 + g 78 -5.4 -5.05228 | TGATTTTCATCTAAG CAAG ATA CTTG TTTTTCTAGTTTGCT Ava_0842 1028339 - 1027158 - | glycosyl transferase, group 1 Ava_0843 1029519 - 1028569 - | glycosyl transferase family protein Ava_0844 1030518 - 1029574 - | glycosyl transferase family protein Ava_0845 1031691 - 1030561 - | polysaccharide pyruvyl transferase TERM 914 1031077 - 1031117 + g 85 -5.7 -5.16132 | opp_overlap 1031078 1031083, overlap 1031078 ACCAGCTTGATTTAA ATTTAATTCTTTATCGTTT CTA AAATGATAAAGAATAGAAC TTTTATTTTGATATG TERM 915 1031078 - 1031116 + g 78 -9.2 -3.68052 | opp_overlap 1031078 1031083, overlap 1031077 CCAGCTTGATTTAAA TTTAATTCTTTATCGTTT CTA AAATGATAAAGAATAGAA CTTTTATTTTGATAT TERM 916 1031111 - 1031083 - G 71 -9.1 -3.29324 | opp_overlap 1031078 1031077, overlap 1031078 TTGATTTAAATTTAA TTCTTTATCGTTT CTA AAATGATAAAGAA TAGAACTTTTATTTT Ava_0846 1032967 - 1031702 - | polysaccharide biosynthesis protein TERM 917 1032056 - 1032070 + g 70 -2.8 -5.03715 | overlap 1032058 TAGAATTAAAGGTGT GATTAC AAA GTAAGC TTTTTTCAGGCTGCT TERM 918 1032607 - 1032617 + g 75 -5.4 -4.84359 | opp_overlap 1032598 1032607, overlap 1032598 1032594 TACAGATTGGCAAAA CCAA CTG TTGG TTTTTATAAAACTGA Ava_0847 1034366 - 1032954 - | glycosyl transferase, group 1 Ava_0848 1035355 - 1034363 - | glycosyl transferase family protein Ava_0849 1036355 - 1035390 - | glycosyl transferase family protein Ava_0850 1037544 - 1036465 - | acyltransferase 3 TERM 919 1037271 - 1037259 - G 80 -4.8 -5.08601 | TTAGGCTAAGAAAAA CCCA ATATA TGGG GTAGATACGTAAAAA TERM 920 1037303 - 1037315 + g 71 -4.9 -4.65078 | opp_overlap 1037303 CTTTTGAATAAAAAT GTAAA TGT TTTAC TTTTGTTAGCGATAT TERM 921 1037446 - 1037423 - G 75 -5.4 -4.86621 | overlap 1037409 ATTTTGAACCAAAAA TTTTGACCAA AATT TTGGTTAAAA ATCAAGTCTCCATGT Ava_0851 1039126 - 1037717 - | O-antigen polymerase TERM 922 1038555 - 1038536 - G 70 -7.9 -3.65828 | AGACAAAGGTGCAAA CTGGGAT GGCAAA ATCCCAG GCACAAACATTTGTA Ava_0852 1041312 - 1039129 - | lipopolysaccharide biosynthesis TERM 923 1040711 - 1040726 + g 77 -8.2 -3.92869 | overlap 1040723 CTGGTCTGATCATCT GTGGCG ACAA CGCCGC TTTGCTGTCTGTATT Ava_0853 1042614 - 1041418 - | glycosyl transferase, group 1 TERM 924 1042673 - 1042655 - R 78 -7.5 -4.25388 | opp_overlap 1042653 1042655 CACACTAAAATTAAA GACAGTT GGGAA AACTGTC TGTTTGTCAGCTAAT Ava_0854 1043894 - 1042680 - | glycosyl transferase, group 1 TERM 925 1044461 - 1044500 + r 87 -12.2 -3.18582 | gap 1, opp_overlap 1044466, overlap 1044452 1044467 GCGTAGCGTCCCGTA GGGAAGTTCGTCGGGAGGG AAA CCCTCCTTGCG-ACTTCTC TTCCTGCCTCCCCTA Ava_0855 1045808 - 1044513 - | histidinol dehydrogenase TERM 926 1045061 - 1045077 + g 73 -7.3 -4.11216 | overlap 1045064 ATAATAAATCCCAGG CGATCCA TTC TGGATTG TTTTGGCGATCGGCG TERM 927 1045472 - 1045511 + g 82 -8 -4.47707 | gap 1, overlap 1045477 AATTTAAGCCTAGTT TTACGCCTACGGTGTCGGT GTA ACCGATATCCTGGG-GTAA TTGTTTTTGATGAAA TERM 928 1045968 - 1045992 + r 95 -12.9 -3.77831 | opp_overlap 1045963, overlap 1045969 1045981 ATGCAATACACTTTG ACCTCTCTCCT GCG AGGAGAGAGGC TTTGAGTCTTACTCC TERM 929 1045969 - 1045991 + r 100 -16.4 -2.86217 | opp_overlap 1045963, overlap 1045968 1045981 TGCAATACACTTTGA CCTCTCTCCT GCG AGGAGAGAGG CTTTGAGTCTTACTC mutL 1047758 - 1046067 - | DNA mismatch repair protein TERM 930 1047853 - 1047814 - H 100 -13.6 -3.29096 | gap 1, opp_overlap 1047819, overlap 1047819 GGCATGAAGCAGGAA GAGAAGT-CGCAAGGAGGG TTT CCCTCCGGGCGAACTTCCC TACGGGACGCTACGC TERM 931 1047847 - 1047819 - H 78 -8.7 -3.73813 | opp_overlap 1047819, overlap 1047814 GAAGCAGGAAGAGAA GTCGCAAGGAGGG TTT CCCTCCGGGCGAA CTTCCCTACGGGACG TERM 932 1049907 - 1049894 - g 82 -6.7 -4.84492 | overlap 1049901 TGAACCAGAAGAAAA TAGCG AAGT CGCTA ACAACTGGATAGCCC Ava_0857 1048113 - 1051220 + | putative phosphate transport system substrate-binding protein Ava_0858 1051728 - 1051432 - | hypothetical protein Ava_0859 1052629 - 1051847 - | hypothetical protein TERM 933 1052038 - 1052027 - G 84 -3.6 -5.43974 | AAAAGTAAAGAAAAA GCGA TAAG CCGC AGGATAAGCCACCAT Ava_0860 1052678 - 1053088 + | DoxX TERM 934 1053211 - 1053185 - T 91 -9.4 -4.40601 | opp_overlap 1053187, overlap 1053187 AAGCCACACAACAAA TAGGGGTAGGCT TGA AACCCACCCCTT TTGTTTCTGATATAG TERM 935 1053209 - 1053187 - T 93 -12 -3.79864 | opp_overlap 1053187, overlap 1053185 GCCACACAACAAATA GGGGTAGGCT TGA AACCCACCCC TTTTGTTTCTGATAT TERM 936 1053187 - 1053209 + T 89 -7.6 -5.03227 | opp_overlap 1053187 1053185 GCCACACAACAAATA GGGGTAGGCT TGA AACCCACCCC TTTTGTTTCTGATAT Ava_0861 1054040 - 1053168 - | 3-deoxy-7-phosphoheptulonate synthase TERM 937 1054205 - 1054182 - H 100 -14.6 -5.63517 | opp_overlap 1054175 GTTGCAAACAAAAAA GCCCAGAACC TTTG GGTTCCGGGC GCGTATGATTTATCG TERM 938 1054348 - 1054329 - H 100 -13.6 -5.75538 | opp_overlap 1054329 CTGAAAAAACAAAAA CCGCAGAG TTAG CTCTGCGG TTCACTGGGCGGTTT TERM 939 1054329 - 1054348 + H 100 -13.6 -3.06312 | opp_overlap 1054329 CTGAAAAAACAAAAA CCGCAGAG TTAG CTCTGCGG TTCACTGGGCGGTTT TERM 940 1054806 - 1054781 - g 71 -4 -4.87133 | opp_overlap 1054781 ATGGCGTAAATAAAA TTTCTCACCC ACAAGG GGATGAGGAA TTTGGTAGTAGGTCA TERM 941 1054822 - 1054857 + G 79 -10.7 -3.1855 | overlap 1054824 1054829 TTTGGTAGTAGGTCA TGGGTAATGGGTAAT TGGACT ATTACCTATTACCTA TTAACTATTACCAAA TERM 942 1054824 - 1054855 + G 79 -11.1 -3.15503 | overlap 1054822 1054829 TGGTAGTAGGTCATG GGTAATGGGTAAT TGGACT ATTACCTATTACC TATTAACTATTACCA Ava_0862 1054744 - 1055040 + | hypothetical protein Ava_0863 1055105 - 1055599 + | hypothetical protein TERM 943 1055877 - 1055825 - f 95 -13.5 -3.29461 | overlap 1055841 CAAGGGTTTGGACAA GGGTGTAGGGGTATAAGGGTATAAA TGC TTGAAACCCTTACACCCCCGTACCC TTGAACCCTTACACC TERM 944 1056326 - 1056315 - g 81 -4.4 -5.35224 | GCCACAAAAACAAAA CTCA GACT TGAG TGGCAAAGATTTTAG Ava_0864 1056025 - 1056678 + | heat shock protein DnaJ-like TERM 945 1056787 - 1056808 + F 78 -8 -4.21462 | opp_overlap 1056787 1056785 GATTGATACGAAAGA CTCCATCC CCCTGT GGGTGGAG TTTTCGGTAATAGGT TERM 946 1057403 - 1057422 + G 70 -3.6 -4.88736 | GATAGCAAATCAATT TCAACG TAAATGGT CGTTGA TTTTTATAGATGGTC Ava_0865 1056933 - 1057877 + | hypothetical protein Ava_0866 1058548 - 1058057 - | hypothetical protein TERM 947 1059198 - 1059184 - g 73 -2.8 -5.10163 | AATCTCAAAATAAAA CAGCAC CTG ATACTG CACAAAAGTGGCATT Ava_0867 1058850 - 1060367 + | monooxygenase, FAD-binding TERM 948 1060411 - 1060385 - T 74 -5.2 -4.88067 | ATTCATGCAGAAAAA TACCCGACCT CGCTAAC AAATCGGGTA TTGATGCTGTGATTT Ava_0868 1060755 - 1060552 - | high light inducible protein Ava_0869 1061003 - 1060800 - | high light inducible protein TERM 949 1061711 - 1061735 + G 70 -10 -2.5655 | overlap 1061706 1061710 ACCAACCTCTCTGTA GCCGCAGGTA TTTCC TACCTGGGGC GTTCATCTGACTCAG TERM 950 1062436 - 1062407 - g 95 -13 -3.23152 | opp_overlap 1062406 1062400 1062410, overlap 1062410 ACAGTAACTCAGCAA CAACCCACCCAA GACCGT TTGGGTGAGTTG GTCGATTATCTGAAA TERM 951 1062433 - 1062410 - g 78 -8.9 -3.75105 | opp_overlap 1062410 1062406 1062400, overlap 1062407 GTAACTCAGCAACAA CCCACCCAA GACCGT TTGGGTGAG TTGGTCGATTATCTG TERM 952 1063304 - 1063291 - g 79 -6.7 -4.64766 | overlap 1063293 GTTAGAGTCGAAAAA CTTGG CAGA CCAAG CCAGATATCAAGCAG TERM 953 1064013 - 1063982 - g 70 -7.5 -3.80858 | gap 2 CCAGAAGGCATTAAA CGTG-A-CATGCAGT TATT ACTGCATGATCCACG CGTTGGGGTAGAAAG Ava_0870 1061516 - 1064638 + | hypothetical protein TERM 954 1064669 - 1064687 + F 100 -10.3 -5.47821 | CCGCTAAATTTCTCA CCTCCCA CACAT TGGGAGG TTTTTTTAGGTAGGT TERM 955 1064783 - 1064798 + F 74 -2.6 -5.2696 | AAGTCCTGTTGTGTC TAGGTT GCAT AATCTA TTTTTTGAATTTTGA Ava_0871 1064881 - 1066419 + | amine oxidase Ava_0872 1067395 - 1066445 - | hypothetical protein Ava_0873 1068717 - 1067527 - | histidine kinase Ava_0874 1069397 - 1070248 + | nitrate transport permease TERM 956 1070508 - 1070522 + G 70 -2.8 -5.02476 | GCGCCATTTGCGATC GCCT GGAAAAA AGGC TTTTTTCGCAAGTAT TERM 957 1071094 - 1071116 + G 73 -8.4 -3.63991 | opp_overlap 1071094 1071093 CCCAAGGTAAAGAAG TCTGGCTGGG ACA CCCAGATAGA TTATTGGGAGTAATG Ava_0875 1070286 - 1071728 + | twin-arginine translocation pathway signal TERM 958 1072031 - 1072020 - g 78 -5.8 -4.82901 | opp_overlap 1072007 1072007 1072020 GCGGGCTTAGAAAAA GCCA CTTC TGGC TCAGTTAGGCTTGAC Ava_0876 1071792 - 1072628 + | nitrate transport ATP-binding subunits C and D Ava_0877 1072923 - 1073630 + | hypothetical protein TERM 959 1073667 - 1073705 + F 76 -9.9 -3.03124 | opp_overlap 1073667 1073670 1073677, overlap 1073677 TATCTAAATGAAAAT GCAGAGAAAAGTCACC-TA TTA TAGGGTGACTTTTTTC-GC TATTACAAAATAACA TERM 960 1073696 - 1073677 - f 76 -5.8 -4.59984 | gap 1, opp_overlap 1073667 1073677, overlap 1073670 1073667 AAAATGCAGAGAAAA GTCACC-TA TTA TAGGGTGAC TTTTTTCGCTATTAC TERM 961 1073677 - 1073696 + F 83 -5.8 -5.1615 | gap 1, opp_overlap 1073677 1073670 1073667, overlap 1073667 AAAATGCAGAGAAAA GTCACC-TA TTA TAGGGTGAC TTTTTTCGCTATTAC Ava_0878 1073740 - 1075077 + | arsenical pump membrane protein TERM 962 1075171 - 1075197 + F 80 -6.7 -4.89233 | opp_overlap 1075171 GCTATTATTTAGAAT GATATGCAGGA ATAAA TCTTGTATATC TTTTTAGTATTAATC TERM 963 1075749 - 1075737 - g 74 -4.1 -5.01422 | TGATAGAAAAAGAAA CTCAG CAA CTAAG TCATGATAAAGCTGA Ava_0879 1075226 - 1075819 + | hypothetical protein TERM 964 1076257 - 1076236 - g 71 -8.7 -3.31144 | opp_overlap 1076222 CGCTTACTTCCAGAA GCTGTGATC TTAA GATCGCAGC AAGATAAACAACTAA Ava_0880 1076029 - 1077822 + | OmpA/MotB Ava_0881 1077838 - 1078335 + | small GTP-binding protein domain-containing protein TERM 965 1078335 - 1078322 - f 72 -3.9 -5.00616 | TTTTGGCTCAAAAAA TTATG GAGA CATAA ATGCTAAATATACCT Ava_0882 1078336 - 1078746 + | hypothetical protein TERM 966 1078878 - 1078859 - f 74 -3.6 -5.16472 | AAAAATGGCAAAAAA CTGATAAA GTTC TGTATCAG CCTGGATTTGCATCA Ava_0883 1078916 - 1080010 + | TRAP dicarboxylate transporter- DctP subunit Ava_0884 1081586 - 1080249 - | TRAP dicarboxylate transporter, DctM subunit TERM 967 1081519 - 1081507 - G 82 -7.7 -4.56914 | CCACCCAAAGCAAAA GCTAC TGG GTAGC CTGAAGATAATAGAA Ava_0885 1082124 - 1081570 - | tripartite ATP-independent periplasmic transporter DctQ Ava_0886 1082262 - 1082498 + | hypothetical protein Ava_0887 1082593 - 1083087 + | acetyltransferase Ava_0888 1083128 - 1083703 + | hypothetical protein TERM 968 1083866 - 1083880 + G 70 -2.8 -4.95155 | AACTGCCTTTTGCCT TAGTTG CAG CTACTA TTTTTGTGGTCTCGA Ava_0889 1083841 - 1084290 + | hypothetical protein Ava_0890 1085539 - 1084547 - | MscS mechanosensitive ion channel Ava_0891 1085747 - 1085628 - | potassium channel protein Ava_0892 1087064 - 1085775 - | hypothetical protein Ava_0893 1088178 - 1087495 - | Phage SPO1 DNA polymerase-related protein Ava_0894 1089444 - 1088350 - | TPR-related region Ava_0895 1089625 - 1090287 + | UbiE/COQ5 methyltransferase Ava_0896 1090633 - 1090280 - | hypothetical protein Ava_0897 1090826 - 1091191 + | glyoxalase/bleomycin resistance protein/dioxygenase TERM 969 1091226 - 1091250 + F 76 -6.6 -4.37763 | gap 1, opp_overlap 1091229, overlap 1091241 CTTACTCAGGTTAAG TGATTGCAATC TCAA GAT-GCAATCA TCTTTTTTTCAATGA TERM 970 1091241 - 1091252 + F 84 -4.4 -5.47821 | opp_overlap 1091229, overlap 1091226 TGATTGCAATCTCAA GATG CAAT CATC TTTTTTTCAATGAAT TERM 971 1091870 - 1091848 - g 100 -12 -4.7629 | opp_overlap 1091840 1091848 GGATTAATTGAAAAA GCTGCTCCCA CTT TGGCAGCAGC TTATGAAATTTCTCG TERM 972 1091848 - 1091870 + G 91 -12 -3.41126 | opp_overlap 1091848, overlap 1091840 GGATTAATTGAAAAA GCTGCTCCCA CTT TGGCAGCAGC TTATGAAATTTCTCG Ava_0898 1091332 - 1092075 + | hypothetical protein TERM 973 1092230 - 1092264 + T 100 -15.8 -3.19192 | opp_overlap 1092229 TACTCAGTTATAGAT TTTCAGCCCCTTCCCT TGT AGGGAAGGGGTTGGGG TTAAGTTCCGTCGAA TERM 974 1092359 - 1092323 - T 100 -9.6 -4.90013 | opp_overlap 1092323 1092330 CAATCCAAGGAAAAA GTCAAAAGGTACAAGA TTTTT TCTTTTGCCTTTTGAC TTTTGACTTTCTACT TERM 975 1092323 - 1092359 + T 95 -11.8 -4.40173 | opp_overlap 1092323, overlap 1092330 CAATCCAAGGAAAAA GTCAAAAGGTACAAGA TTTTT TCTTTTGCCTTTTGAC TTTTGACTTTCTACT Ava_0899 1093539 - 1092391 - | Cys/Met metabolism pyridoxal-phosphate-dependent enzyme Ava_0900 1093805 - 1094581 + | hypothetical protein Ava_0901 1094640 - 1096481 + | TPR repeat-containing protein Ava_0902 1097413 - 1096616 - | CBS TERM 976 1097569 - 1097532 - R 100 -15.7 -3.54935 | opp_overlap 1097533 1097538, overlap 1097533 CAAACCCTCTTCAAA CTTCAAGCGCCCAGACT AAAC AGCCTGAGCGCTTGAAT ATTAGGTTGCAGGGG TERM 977 1097568 - 1097533 - R 100 -19.2 -2.7264 | opp_overlap 1097533 1097538, overlap 1097532 AAACCCTCTTCAAAC TTCAAGCGCCCAGACT AAAC AGCCTGAGCGCTTGAA TATTAGGTTGCAGGG TERM 978 1097533 - 1097568 + r 100 -14.8 -3.14878 | opp_overlap 1097533 1097532, overlap 1097538 AAACCCTCTTCAAAC TTCAAGCGCCCAGACT AAAC AGCCTGAGCGCTTGAA TATTAGGTTGCAGGG TERM 979 1097538 - 1097563 + r 71 -8.9 -3.20236 | opp_overlap 1097533 1097532, overlap 1097533 CTCTTCAAACTTCAA GCGCCCAGACT AAAC AGCCTGAGCGC TTGAATATTAGGTTG Ava_0903 1097970 - 1097605 - | hypothetical protein TERM 980 1098409 - 1098455 + H 100 -14.4 -2.90392 | overlap 1098402 CGTCAGTATTTGTAG GGTGGGCAATGCCCACCATATC CGG GTTTTGGTGGGCAATGCCTACG TATAATTCAAAAATC TERM 981 1098907 - 1098918 + G 85 -4.4 -5.47431 | opp_overlap 1098907 TCATCCTATTAAGTA TTCG TTCC CGAA TTTTTTCTCTCTTAG Ava_0904 1098621 - 1099376 + | TspO and MBR related proteins TERM 982 1099595 - 1099537 - T 100 -23.5 -3.35597 | gap 2, overlap 1099539 1099540 1099565 TTGATTTCTGAAATA TACGTAGGGTGGGCATTGCCCACCACAAC CAT GATACGGTGGGCAATGCCCACCCTAC--A GATACTAATATATTG TERM 983 1099595 - 1099539 - T 100 -33.3 -3.24708 | overlap 1099537 1099540 1099565 GATTTCTGAAATATA CGTAGGGTGGGCATTGCCCACCACAAC CAT GATACGGTGGGCAATGCCCACCCTACA GATACTAATATATTG TERM 984 1099594 - 1099540 - T 100 -34.6 -2.54504 | overlap 1099537 1099539 1099565 ATTTCTGAAATATAC GTAGGGTGGGCATTGCCCACCACAAC CAT GATACGGTGGGCAATGCCCACCCTAC AGATACTAATATATT Ava_0905 1099989 - 1099624 - | hypothetical protein Ava_0906 1100258 - 1099986 - | hypothetical protein TERM 985 1100151 - 1100163 + g 71 -3.4 -4.96657 | TATGTCAATAATTAC CATC TTACC GATG TTTTCTTCTGTTTCT Ava_0907 1100602 - 1100402 - | hypothetical protein Ava_0908 1101060 - 1100878 - | hypothetical protein TERM 986 1101453 - 1101426 - g 74 -6.6 -4.29176 | opp_overlap 1101449 ACATTCAATTCAAAA TAATAAAATTTT AAAT AAAATTTCATTA AATGGTAATGTTTAC TERM 987 1101482 - 1101508 + G 73 -7.5 -4.21812 | gap 1, opp_overlap 1101489, overlap 1101482 ACTGTTTTTCTCTAT CT-GAAGATGAT GAGC ATCATCTTCAAG TTGTTTTAGCTAAAA Ava_0909 1101310 - 1102287 + | hypothetical protein TERM 988 1102311 - 1102352 + T 100 -9 -5.27938 | gap 1, opp_overlap 1102320, overlap 1102315 1102320 AATAAATGTAAGTAA TAAGAAAAACGGTAGAGGA TAAAT TCCTTTACCG-TTTTCTAA TTTTTATTTGAGACT TERM 989 1102315 - 1102349 + T 82 -10.9 -3.45131 | opp_overlap 1102320, overlap 1102311 1102320 AATGTAAGTAATAAG AAAAACGGTAGAGGA TAAAT TCCTTTACCGTTTTC TAATTTTTATTTGAG TERM 990 1102344 - 1102320 - T 100 -8.6 -5.3321 | opp_overlap 1102320 1102315 1102311 AAGTAATAAGAAAAA CGGTAGAGGA TAAAT TCCTTTACCG TTTTCTAATTTTTAT TERM 991 1102320 - 1102344 + T 100 -10.8 -4.73912 | opp_overlap 1102320, overlap 1102315 1102311 AAGTAATAAGAAAAA CGGTAGAGGA TAAAT TCCTTTACCG TTTTCTAATTTTTAT Ava_0910 1104855 - 1102384 - | UvrB/UvrC protein TERM 992 1104046 - 1104081 + g 70 -7.6 -3.68222 | AAGTATTACATTACC CGCTTGACGAATCTCA TCCA TGATTTTCTTCAAGCG TTCTTCAAATTCACC TERM 993 1104160 - 1104174 + g 79 -8.6 -4.16842 | opp_overlap 1104144 1104162 ACGCTTATCTTCAAG GATGTC GGG GACATC TTTGTTAGCGATGCG Ava_0911 1105883 - 1105329 - | ribosomal-protein-alanine acetyltransferase Ava_0912 1105976 - 1107370 + | diaminopimelate decarboxylase Ava_0913 1107550 - 1108515 + | hypothetical protein TERM 994 1108935 - 1108971 + G 83 -8.8 -4.11484 | gap 1 AATCGCGGTATTCGG TTTTCTGTCG-CCACCA ATTA TGGGGGACGACAGGAGA TTTTACAAGCTTGCC Ava_0914 1108512 - 1109261 + | undecaprenyl pyrophosphate synthetase Ava_0915 1109614 - 1109342 - | hypothetical protein Ava_0916 1110147 - 1109635 - | heat shock protein DnaJ-like TERM 995 1109807 - 1109795 - G 71 -4.1 -4.8743 | CCCAAAATAAATAAA GCAAA GAT TTCGC CGGAAGACAGGGGGC Ava_0917 1110331 - 1111224 + | hypothetical protein Ava_0918 1112244 - 1111243 - | heat shock protein DnaJ-like dnaK 1114504 - 1112438 - | molecular chaperone DnaK Ava_0920 1114903 - 1115751 + | peptidases M20 and M28 Ava_0921 1116324 - 1115758 - | hypothetical protein Ava_0922 1117269 - 1116346 - | hypothetical protein TERM 996 1117308 - 1117287 - R 70 -2.9 -5.17576 | overlap 1117289 CATTAACCTAAAAAA TACTGGGCG AACT CATCCAGCA AATGTCTGAATAACT Ava_0923 1118086 - 1117436 - | hypothetical protein TERM 997 1117692 - 1117702 + g 73 -5.4 -4.70515 | opp_overlap 1117692 AAAACTTGCTCAACA TCTG ACA CAGA TTTCTTTTGCCTATC Ava_0924 1118883 - 1118167 - | orotidine 5'-phosphate decarboxylase Ava_0925 1120182 - 1118986 - | tyrosyl-tRNA synthetase Ava_0926 1120359 - 1122281 + | penicillin-binding protein 1A Ava_0927 1122698 - 1122375 - | hypothetical protein Ava_0928 1123773 - 1122811 - | heat shock protein DnaJ-like Ava_0929 1123999 - 1124373 + | hypothetical protein Ava_0930 1124481 - 1125014 + | hypothetical protein TERM 998 1125061 - 1125107 + T 100 -19 -2.82516 | TTGAGGCTGGGTGTA AGGGTATAGGGGTATAAGGGTT GCA AACATTTATACCCCTATACCCC TGTACTCATACACCC Ava_0931 1125738 - 1125166 - | thylakoidal processing peptidase TERM 999 1125827 - 1125864 + r 100 -7.1 -5.85011 | gap 1, overlap 1125830 1125833 CTTTATTTTAGGAGT GTTTAAGGGTGTCAGGAT TAT ATCCTCACACCCT-GATC TTTTTTTACTTTTTC TERM 1000 1125830 - 1125862 + r 100 -12.1 -4.51121 | overlap 1125827 1125833 TATTTTAGGAGTGTT TAAGGGTGTCAGGAT TAT ATCCTCACACCCTGA TCTTTTTTTACTTTT TERM 1001 1125833 - 1125859 + r 100 -13.8 -3.1595 | overlap 1125830 1125827 TTTAGGAGTGTTTAA GGGTGTCAGGAT TAT ATCCTCACACCC TGATCTTTTTTTACT Ava_0932 1126487 - 1125870 - | hypothetical protein glk 1127561 - 1126533 - | glucokinase Ava_0934 1128252 - 1127605 - | phosphoglycerate/bisphosphoglycerate mutase Ava_0935 1128564 - 1128881 + | hypothetical protein TERM 1002 1128918 - 1128939 + F 100 -10.9 -5.61596 | TTTGAATTTTGTAAG TTCCCTGTC TACT GGCAGGGAA TTTTTTTGTAAAAAT sdhA 1129011 - 1130747 + | succinate dehydrogenase flavoprotein subunit TERM 1003 1130802 - 1130762 - f 78 -9.1 -3.78736 | overlap 1130763 GATACATCTAGTAAA TTGAGACGAGAAACGCA AAACTAA TACGCTTCTCGTCCCAC CCAATAAGCTTAATT TERM 1004 1130801 - 1130763 - f 86 -12.6 -2.8676 | overlap 1130762 ATACATCTAGTAAAT TGAGACGAGAAACGCA AAACTAA TACGCTTCTCGTCCCA CCCAATAAGCTTAAT TERM 1005 1131488 - 1131498 + G 81 -4 -5.26875 | TATTGGCAAATGGAG GAAA AAT TTTC TTTTTTAGTTCAGAC Ava_0937 1130951 - 1132606 + | hypothetical protein TERM 1006 1133012 - 1133054 + T 74 -7.9 -3.91473 | opp_overlap 1133017, overlap 1133017 TAGGCAATTTGAATT AAAAATTAACGTGAGTCTT CAACA AGGGCGCACGTTAATTTTA TTTATAGAGATTTAT TERM 1007 1133017 - 1133049 + T 89 -7.8 -4.99043 | opp_overlap 1133017, overlap 1133012 AATTTGAATTAAAAA TTAACGTGAGTCTT CAACA AGGGCGCACGTTAA TTTTATTTATAGAGA aksA 1134235 - 1133099 - | trans-homoaconitate synthase TERM 1008 1134317 - 1134352 + r 82 -7.7 -4.41348 | opp_overlap 1134328, overlap 1134320 ATGCACTTTATTCTG TACTGTAGAGACGTT ACATAC AACGTCTCTACATCA TTTATTTGGCGCAAA TERM 1009 1134320 - 1134349 + r 100 -13.8 -3.18452 | opp_overlap 1134328, overlap 1134317 CACTTTATTCTGTAC TGTAGAGACGTT ACATAC AACGTCTCTACA TCATTTATTTGGCGC Ava_0939 1135101 - 1134685 - | hypothetical protein Ava_0940 1136000 - 1135164 - | deoxyribodipyrimidine photo-lyase family protein Ava_0941 1136221 - 1136709 + | hypothetical protein TERM 1010 1136744 - 1136797 + F 80 -2 -5.63236 | gap 2, overlap 1136749 CGAGTCTCTTTGATT TGACGGGGTATAAGGATGTGATGGTT TTCA AAAC-TTACATCCTCATACCCT-TTA TTTTTATTTTTGGAT TERM 1011 1136749 - 1136793 + F 100 -8.8 -5.21459 | gap 1, overlap 1136744 CTCTTTGATTTGACG GGGTATAAGGATGTGATGGTT TTCA AAAC-TTACATCCTCATACCC TTTATTTTTATTTTT Ava_0942 1136985 - 1138310 + | FAD-dependent pyridine nucleotide-disulphide oxidoreductase Ava_0943 1138447 - 1139328 + | Short-chain dehydrogenase/reductase SDR Ava_0944 1140257 - 1139388 - | hypothetical protein Ava_0945 1141600 - 1140254 - | ATPase TERM 1012 1140574 - 1140584 + g 71 -4 -4.83246 | AAATAAAACCTTTTT CTTT ACT AAAG TTTATTTCTTTATAA Ava_0946 1141817 - 1141590 - | hypothetical protein Ava_0947 1143400 - 1141853 - | hypothetical protein TERM 1013 1143538 - 1143494 - R 91 -10.2 -4.39954 | gap 1, opp_overlap 1143495, overlap 1143497 CAATAAGAATACAAA TAATTTAGTAGGGGCGCACAA ATAA CTGTACGCCCCCACTAAAA-A TCTATCTATATCAGC TERM 1014 1143536 - 1143497 - R 100 -18.8 -4.27463 | opp_overlap 1143495, overlap 1143494 TAAGAATACAAATAA TTTAGTAGGGGCGCACAA ATAA CTGTACGCCCCCACTAAA AATCTATCTATATCA Ava_0948 1144111 - 1143563 - | NUDIX hydrolase Ava_0949 1144751 - 1144197 - | 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase TERM 1015 1144869 - 1144839 - H 100 -14.2 -3.64703 | opp_overlap 1144838 1144836 1144841 TGGCTTCTAGCTAAA GATCCCCAACTTCT CTA AAAAATTGGGGATC ATGTTGCTCAAAAAT Ava_0950 1145225 - 1147555 + | penicillin-binding protein 1A Ava_0951 1147827 - 1149380 + | Type III restriction enzyme, res subunit Ava_0952 1149310 - 1150530 + | hypothetical protein TERM 1016 1150859 - 1150808 - T 100 -14 -3.54424 | gap 1, opp_overlap 1150821, overlap 1150809 1150821 1150839 1150840 TCTGATCCCCCTAAA TCCCCCTTAA-AAAGGGGGACTT AAAGAAA AATTCCCCCTTTTTTAAGGGGGG CTAGGGGGGATCAAA TERM 1017 1150858 - 1150809 - T 100 -17.5 -2.72511 | gap 1, opp_overlap 1150821, overlap 1150808 1150821 1150839 1150840 CTGATCCCCCTAAAT CCCCCTTAA-AAAGGGGGACTT AAAGAAA AATTCCCCCTTTTTTAAGGGGG GCTAGGGGGGATCAA TERM 1018 1150821 - 1150845 + T 78 -5.7 -5.00616 | opp_overlap 1150809 1150808 1150821 1150839 1150840 AATCCCCCTTAAAAA GGGGGACTT AAAGAAA AATTCCCCC TTTTTTAAGGGGGGC TERM 1019 1150845 - 1150821 - T 73 -5.7 -4.57341 | opp_overlap 1150821, overlap 1150809 1150808 1150839 1150840 AATCCCCCTTAAAAA GGGGGACTT AAAGAAA AATTCCCCC TTTTTTAAGGGGGGC TERM 1020 1150860 - 1150839 - T 81 -4.3 -5.30616 | opp_overlap 1150821, overlap 1150821 1150809 1150808 1150840 GGACTTAAAGAAAAA TTCCCCCTT TTTT AAGGGGGGC TAGGGGGGATCAAAA TERM 1021 1150859 - 1150840 - T 72 -7.8 -3.77285 | opp_overlap 1150821, overlap 1150821 1150809 1150808 1150839 GACTTAAAGAAAAAT TCCCCCTT TTTT AAGGGGGG CTAGGGGGGATCAAA TERM 1022 1150968 - 1151002 + T 100 -15.8 -3.19192 | opp_overlap 1150967 TACTCAGTTATAGAT TTTCAGCCCCTTCCCT ACA AGGGAAGGGGTTGGGG TTAGGTTCCGTCGAA Ava_0953 1153221 - 1151026 - | hypothetical protein TERM 1023 1152016 - 1151984 - G 70 -10 -2.54523 | opp_overlap 1151984 GTATATTCTAATTGA TTTGCATCAGCAAC TTGCT GTTGCTGACGGAAA TTCTGCCCCAAATTT Ava_0954 1154226 - 1153234 - | zinc-containing alcohol dehydrogenase superfamily protein TERM 1024 1154017 - 1154003 - G 70 -5.6 -4.25104 | TCCCCCGCACCAAAA CTCTGG ACA CCAGCG CCCACCGCTTCCACA TERM 1025 1154304 - 1154292 - R 78 -7.7 -4.31085 | overlap 1154294 TATACCAATTCAAAA TTCCC TGC GGGAA CGCCAAGGGCGAACA Ava_0955 1154930 - 1154499 - | hypothetical protein TERM 1026 1155150 - 1155094 - R 100 -19.5 -3.52966 | overlap 1155091 AAAACGAAAGATCAA GGGTGTGAGGGTATAGGGGTAACTTGA AAC CCCTTACACCCCTATACCCTCACACCC TTACACCCAGTCTCA TERM 1027 1155227 - 1155206 - R 86 -5.7 -5.35815 | opp_overlap 1155207, overlap 1155207 CATATCAAATAAAAA GCCCCCGGA AAAT CCCAGGGGT GTTTAAGTATGCCAT TERM 1028 1155226 - 1155207 - R 81 -9.2 -3.79862 | opp_overlap 1155207, overlap 1155206 ATATCAAATAAAAAG CCCCCGGA AAAT CCCAGGGG TGTTTAAGTATGCCA Ava_0956 1156596 - 1155493 - | hypothetical protein TERM 1029 1156631 - 1156664 + r 93 -7.5 -5.08088 | gap 1, opp_overlap 1156631 1156633, overlap 1156636 1156637 TTTGAAAAATATAAG TATGTGTAGGGTGGGT AAT GCCCACCCTAT-CTTA TTTTTGTTGAGCATT TERM 1030 1156636 - 1156661 + r 95 -10.5 -4.63592 | gap 1, opp_overlap 1156631 1156633, overlap 1156631 1156637 AAAATATAAGTATGT G-TAGGGTGGGT AAT GCCCACCCTATC TTATTTTTGTTGAGC TERM 1031 1156637 - 1156659 + r 100 -14.2 -3.91737 | opp_overlap 1156631 1156633, overlap 1156636 1156631 AAATATAAGTATGTG TAGGGTGGGT AAT GCCCACCCTA TCTTATTTTTGTTGA TERM 1032 1156798 - 1156854 + r 100 -23.1 -3.24708 | overlap 1156798 1156799 AAAATTCTCATTATC TGTAGGGTGGGCATTGCCCACAGGCTC ATG GTTTTGGTGGGCAATGCCCACCCTACG TATATTTCAAAAATC TERM 1033 1156798 - 1156856 + r 95 -13.3 -3.35597 | gap 2, overlap 1156798 1156799 AAAATTCTCATTATC T--GTAGGGTGGGCATTGCCCACAGGCTC ATG GTTTTGGTGGGCAATGCCCACCCTACGTA TATTTCAAAAATCAA TERM 1034 1156799 - 1156853 + r 100 -24.4 -2.54504 | overlap 1156798 1156798 AAATTCTCATTATCT GTAGGGTGGGCATTGCCCACAGGCTC ATG GTTTTGGTGGGCAATGCCCACCCTAC GTATATTTCAAAAAT Ava_0957 1158441 - 1157008 - | bifunctional orotidine 5'-phosphate decarboxylase/orotate phosphoribosyltransferase protein TERM 1035 1158528 - 1158584 + r 100 -18.2 -2.64472 | AACATTCTCAGTATC TGTAGGGTGGGCAATGCCCACC AAAACCATGAGCC TGTGGGCATTGCCCACCCTACC TAAATTTCAAAAATA Ava_0958 1159344 - 1158622 - | oxidoreductase, molybdopterin binding Ava_0959 1159969 - 1159370 - | hypothetical protein Ava_0960 1160358 - 1162085 + | peptidoglycan binding domain-containing protein Ava_0961 1163038 - 1162352 - | PHP-like TERM 1036 1163497 - 1163442 - R 100 -16.6 -3.79021 | opp_overlap 1163452, overlap 1163434 1163443 1163446 CAAAAGTTTACTAAA TTTATAGTAAGCACTTTAGTACTCAA ACAT TTAAGCACTAAAGTGCTTACTAATAA CACGCTTATTTGTAA TERM 1037 1163497 - 1163443 - R 100 -18.5 -2.86689 | gap 1, opp_overlap 1163452, overlap 1163434 1163442 1163446 AAAAGTTTACTAAAT TTA-TAGTAAGCACTTTAGTACTCAA ACAT TTAAGCACTAAAGTGCTTACTAATAA CACGCTTATTTGTAA TERM 1038 1163493 - 1163446 - R 100 -21.8 -2.67981 | opp_overlap 1163452, overlap 1163434 1163442 1163443 AGTTTACTAAATTTA TAGTAAGCACTTTAGTACTCAA ACAT TTAAGCACTAAAGTGCTTACTA ATAACACGCTTATTT TERM 1039 1163452 - 1163487 + r 79 -10.6 -3.21099 | opp_overlap 1163446 1163442 1163443 CTAAATTTATAGTAA GCACTTTAGTACTCAA ACAT TTAAGCACTAAAGTGC TTACTAATAACACGC Ava_0962 1163828 - 1163622 - | hypothetical protein TERM 1040 1164042 - 1164072 + r 73 -5.4 -4.63218 | opp_overlap 1164046, overlap 1164045 1164046 AAATAACTAGAGAGC AAAACAGCCACGAT TCC ATCGTGACTGCTTG TTTTGTTGAAGAAAA TERM 1041 1164045 - 1164069 + r 79 -7.1 -4.43307 | opp_overlap 1164046, overlap 1164042 1164046 TAACTAGAGAGCAAA ACAGCCACGAT TCC ATCGTGACTGC TTGTTTTGTTGAAGA TERM 1042 1164046 - 1164068 + r 79 -10.6 -3.25261 | opp_overlap 1164046, overlap 1164045 1164042 AACTAGAGAGCAAAA CAGCCACGAT TCC ATCGTGACTG CTTGTTTTGTTGAAG TERM 1043 1164068 - 1164046 - R 100 -12.8 -4.4084 | opp_overlap 1164046 1164045 1164042 AACTAGAGAGCAAAA CAGCCACGAT TCC ATCGTGACTG CTTGTTTTGTTGAAG Ava_0963 1164744 - 1164142 - | manganese and iron superoxide dismutase TERM 1044 1164516 - 1164503 - G 74 -6.7 -4.33248 | GAATTCCAGAAGAAA GTGTG GTTC CACAC TTGAGCAGCGTTGTT TERM 1045 1165171 - 1165204 + r 100 -16.9 -2.52543 | opp_overlap 1165172 ATAGCTTCCTAAAAA ATAGGGAGTCAGTGT TGCA ACACTGACTCCCTAA TAAATTGAAAAAAAT TERM 1046 1165203 - 1165172 - R 100 -20.4 -5.0133 | opp_overlap 1165171 TAGCTTCCTAAAAAA TAGGGAGTCAGTGT TGCA ACACTGACTCCCTA ATAAATTGAAAAAAA Ava_0964 1166850 - 1165246 - | bifunctional pantoate ligase/cytidylate kinase TERM 1047 1166155 - 1166187 + g 75 -5.5 -4.83169 | opp_overlap 1166140 TGCAGCCTCAGCTTG CAGCAAGCCACGATA CAA TACTGCTGCTTGCTG TTTTTCTGGAGCAGT Ava_0965 1168128 - 1167013 - | rare lipoprotein A TERM 1048 1167808 - 1167789 - G 84 -11.4 -3.21218 | opp_overlap 1167785 ATTTCTCAGTATTAA GGGCGTAC GATT GCACGCCC TCAGTATCTCCAATT Ava_0966 1168954 - 1169958 + | glutaminase Ava_0967 1171222 - 1169987 - | MltA Ava_0968 1171477 - 1171223 - | hypothetical protein Ava_0969 1173712 - 1171766 - | putative amino acid transporter TERM 1049 1173409 - 1173420 + g 70 -5.8 -4.26076 | overlap 1173387 TGGCAATAGATCCTT GTCC ATGT GGAC TTTTACTAGCAATGC Ava_0970 1174317 - 1173841 - | hypothetical protein Ava_0971 1174394 - 1174858 + | glyoxalase/bleomycin resistance protein/dioxygenase TERM 1050 1174953 - 1174908 - f 78 -9.1 -3.74872 | gap 1, opp_overlap 1174917 ATTGATGTTAGTAAA GGCGCAGAAGTCAGCCTAA-CT GTT AGATTGGGCTAACTTCTGCTAC ACTCCTTGCATATAT Ava_0972 1175382 - 1175750 + | cyclic nucleotide-binding domain-containing protein Ava_0973 1175779 - 1176573 + | twin-arginine translocation pathway signal Ava_0974 1176746 - 1177057 + | RNA-binding region RNP-1 TERM 1051 1177191 - 1177166 - T 82 -11.9 -2.51256 | opp_overlap 1177167, overlap 1177165 1177163 1177154 ACATATTACTAATAT CGGCTCAAGCA AGAA TGCTTGAGCCT TTTTGATGTAACATC TERM 1052 1177167 - 1177190 + T 100 -15.4 -4.80882 | opp_overlap 1177166 1177165 1177163 1177154 CATATTACTAATATC GGCTCAAGCA AGAA TGCTTGAGCC TTTTTGATGTAACAT Ava_0975 1177722 - 1177264 - | peptidase Ava_0976 1178480 - 1177791 - | hypothetical protein TERM 1053 1178510 - 1178524 + r 74 -10 -2.62613 | opp_overlap 1178510, overlap 1178509 1178506 GGAATTTGACATAGA CGCGAT CGC ATCGCG CTGTTTCCACTCCCG TERM 1054 1178524 - 1178510 - R 76 -10 -3.00994 | opp_overlap 1178510 1178509 1178506 GGAATTTGACATAGA CGCGAT CGC ATCGCG CTGTTTCCACTCCCG Ava_0977 1178969 - 1178487 - | GCN5-related N-acetyltransferase Ava_0978 1179626 - 1179219 - | glyoxalase/bleomycin resistance protein/dioxygenase Ava_0979 1180243 - 1179644 - | tRNA--hydroxylase Ava_0980 1181448 - 1180732 - | Short-chain dehydrogenase/reductase SDR TERM 1055 1181534 - 1181544 + H 70 -8.2 -3.29511 | opp_overlap 1181541 1181542 GAACGCTACCGCGTT CGCC AAA GGCG TTCTCGCAGAGTACC Ava_0981 1182118 - 1182486 + | ferredoxin (2Fe-2S) TERM 1056 1182574 - 1182539 - g 93 -12.6 -3.1372 | gap 1, overlap 1182542 CAGGGGGCAGGAAGA GAAGT-CGCAAGGAGGG TTT CCCTCCGGGCGAACTTC GGGGGCAGGGGGCAG TERM 1057 1182570 - 1182542 - g 75 -8.7 -3.71284 | overlap 1182539 GGGGCAGGAAGAGAA GTCGCAAGGAGGG TTT CCCTCCGGGCGAA CTTCGGGGGCAGGGG TERM 1058 1182630 - 1182595 - g 93 -12.6 -3.1372 | gap 1, overlap 1182598 CAGGGGGCAGGAAGA GAAGT-CGCAAGGAGGG TTT CCCTCCGGGCGAACTTC GGGGGCAGGGGGCAG TERM 1059 1182626 - 1182598 - g 75 -8.7 -3.71284 | overlap 1182595 GGGGCAGGAAGAGAA GTCGCAAGGAGGG TTT CCCTCCGGGCGAA CTTCGGGGGCAGGGG Ava_0982 1182476 - 1183225 + | nuclease (SNase-like) Ava_0983 1183305 - 1184117 + | inositol monophosphatase Ava_0984 1184374 - 1185324 + | heat shock protein DnaJ-like hisZ 1185509 - 1186723 + | ATP phosphoribosyltransferase regulatory subunit Ava_0986 1186905 - 1187129 + | 4Fe-4S ferredoxin, iron-sulfur binding TERM 1060 1187166 - 1187195 + F 100 -11.5 -4.99638 | opp_overlap 1187166 ACATACTTAAGCAAA CAGGCATCTTTCA AACT TGAAGGTTGCCTG TTTTTCTGTAAATGT TERM 1061 1187195 - 1187166 - f 83 -9.3 -3.95148 | opp_overlap 1187166 ACATACTTAAGCAAA CAGGCATCTTTCA AACT TGAAGGTTGCCTG TTTTTCTGTAAATGT Ava_0987 1187371 - 1188156 + | hypothetical protein TERM 1062 1188190 - 1188208 + F 73 -5.3 -4.67635 | opp_overlap 1188190, overlap 1188185 1188182 TGAGTTTTTGTAAAA CATAGGT TGAAT GCCTATG TTTTGTGATTTTCAG Ava_0988 1188237 - 1188980 + | ABC transporter-like TERM 1063 1189238 - 1189216 - g 70 -2.6 -4.93365 | overlap 1189217 CCTGACAATCAAAAA TCCCTAGTCG TAG CTACTAGAGC TATTCCCCCCTTCGT Ava_0989 1189057 - 1190214 + | ionotropic glutamate receptor TERM 1064 1190329 - 1190293 - f 100 -19.7 -3.87075 | opp_overlap 1190296, overlap 1190296 ATCATTCGTGAGAAA CAAGATACCCGAATTCT ACA AGAAGTCGGGTATCTTG ATAAATCAATTAAAA TERM 1065 1190326 - 1190296 - f 100 -15.6 -4.06687 | opp_overlap 1190296, overlap 1190293 ATTCGTGAGAAACAA GATACCCGAATTCT ACA AGAAGTCGGGTATC TTGATAAATCAATTA TERM 1066 1190296 - 1190326 + F 100 -15.6 -3.19389 | opp_overlap 1190296 1190293 ATTCGTGAGAAACAA GATACCCGAATTCT ACA AGAAGTCGGGTATC TTGATAAATCAATTA TERM 1067 1190358 - 1190346 - f 89 -7.7 -4.95957 | opp_overlap 1190354 1190354 TAAATCAATTAAAAA TACCC TAC GGGTA CTCTGCGAGAACGCC TERM 1068 1190380 - 1190370 - f 70 -8.2 -3.29511 | opp_overlap 1190354 1190354 GGTACTCTGCGAGAA CGCC TTT GGCG AACGCGGTAGCGTTC TERM 1069 1190617 - 1190643 + F 100 -16.6 -3.5525 | overlap 1190642 ACCTAACCCCCCTAG CCCCCCTTCCCT ACA AGGGAATGGGGG TTTCAAAGCCTCTCT TERM 1070 1190675 - 1190651 - f 80 -9.9 -3.53343 | opp_overlap 1190642 1190652 1190652, overlap 1190652 AATGGGGGTTTCAAA GCCTCTCTCCG CTT CGGGGAGAGGT TTGGAGAGGGGTCTT TERM 1071 1190674 - 1190652 - f 88 -13.4 -2.71791 | opp_overlap 1190642 1190652 1190652, overlap 1190651 ATGGGGGTTTCAAAG CCTCTCTCCG CTT CGGGGAGAGG TTTGGAGAGGGGTCT TERM 1072 1190652 - 1190674 + F 100 -15.6 -3.53563 | opp_overlap 1190651 1190652, overlap 1190642 1190652 ATGGGGGTTTCAAAG CCTCTCTCCG CTT CGGGGAGAGG TTTGGAGAGGGGTCT TERM 1073 1190719 - 1190740 + F 86 -10.3 -3.77087 | opp_overlap 1190718 1190715 AACTTTTCAAACATT CTCTAAAAC ACTA GTTTTAGAG TTTGACTATTAACTA Ava_0990 1190855 - 1191586 + | twin-arginine translocation pathway signal Ava_0991 1191961 - 1192695 + | twin-arginine translocation pathway signal TERM 1074 1192771 - 1192820 + F 74 -10.1 -2.72829 | gap 1, opp_overlap 1192802 1192803 1192806, overlap 1192803 ATTGATCCCCCTAAC CCCCCTTAAAAAGGAGGGAAAATG AAT CAAAGTCAC-CCTTTTTAAGGGGG ATTTAGGGGGATATA TERM 1075 1193086 - 1193050 - f 73 -6.5 -4.24745 | overlap 1193075 CATTACCAAGATAAA TCCCACTCATTACGTCG CTA CACCATCATGAGGGGGA AATCATGACGATCGC TERM 1076 1193469 - 1193454 - g 76 -7.6 -4.07885 | opp_overlap 1193442 1193453 GATGCTGGTGTAAAA TTGCCA GCTT TGGCAA CCATTTTAGCTTTAT TERM 1077 1193715 - 1193687 - g 75 -10.3 -2.85078 | overlap 1193686 GACATTGCATGAAAT TGGCGATATGATC CGC GATCGCACCGCCA GAGTTACGGAAAATC Ava_0992 1193091 - 1195304 + | Cd/Co/Hg/Pb/Zn-translocating P-type ATPase Ava_0993 1195522 - 1196019 + | Mov34/MPN/PAD-1 TERM 1078 1196197 - 1196185 - g 71 -3.3 -4.98255 | GTGGAAGGACAAAAA CGGCT CAA AGCTG CCAGTGTACTGTGTA Ava_0994 1196083 - 1197255 + | hypothetical protein TERM 1079 1197287 - 1197314 + T 95 -10.7 -4.6468 | opp_overlap 1197284 1197281 1197287 TGTAGAGAAGAAGCA GGGGAAATTCA GAGTTG TGGATTTCCCC TTTTCTGTAATTTAA Ava_0995 1199356 - 1197572 - | transposase IS4 TERM 1080 1198095 - 1198108 + g 74 -6.7 -4.3129 | opp_overlap 1198095 GTTGCTTGCCAACTA GTTCC GGGG GGAAC TTTTCCTACTAAATC Ava_0996 1202707 - 1199375 - | HEAT repeat-containing PBS lyase TERM 1081 1200824 - 1200835 + g 71 -2.2 -5.11937 | opp_overlap 1200819 CAGTGAATCAGCTTC GTTG TAGC CAGC TTTTTTGAGGTTGTT TERM 1082 1202877 - 1202897 + H 76 -7.5 -4.14945 | overlap 1202879 1202891 CCGCCCAACGCAGTG GCTCCCCTT AAA AAGGGGGAC TTTAATTCTTGTTCC TERM 1083 1203275 - 1203260 - H 72 -7.6 -3.74158 | opp_overlap 1203260, overlap 1203241 TTAACGAGATGTAAA TACTCG CTCA CGAGTA TTAAATATTCCTCAA TERM 1084 1203417 - 1203361 - H 100 -18.2 -3.28791 | opp_overlap 1203353 1203376, overlap 1203366 1203376 ACCTCTCTCCTACAA GGATACTGTTCCAAACTCTTGAGGGG TTAAG CCCCTCAAGAGTTTGGAACAGTGGAA AAAAGAGAATAAGTA TERM 1085 1203412 - 1203366 - H 100 -31.3 -2.96274 | opp_overlap 1203376, overlap 1203361 1203376 TCTCCTACAAGGATA CTGTTCCAAACTCTTGAGGGG TTAAG CCCCTCAAGAGTTTGGAACAG TGGAAAAAAGAGAAT TERM 1086 1203402 - 1203376 - H 100 -16.7 -3.55071 | opp_overlap 1203376, overlap 1203366 1203361 GGATACTGTTCCAAA CTCTTGAGGGG TTAAG CCCCTCAAGAG TTTGGAACAGTGGAA TERM 1087 1203376 - 1203402 + H 100 -17.4 -3.54424 | opp_overlap 1203376 1203366 1203361 GGATACTGTTCCAAA CTCTTGAGGGGT TAA GCCCCTCAAGAG TTTGGAACAGTGGAA TERM 1088 1204591 - 1204578 - g 74 -6.7 -4.3129 | opp_overlap 1204578 GATTTAGTAGGAAAA GTTCC CCCC GGAAC TAGTTGGCAAGCAAC Ava_0997 1203546 - 1205114 + | transposase IS4 Ava_0998 1205240 - 1205809 + | hypothetical protein Ava_0999 1206025 - 1207197 + | major facilitator transporter Ava_1000 1208025 - 1207207 - | NAD-dependent epimerase/dehydratase TERM 1089 1208136 - 1208106 - R 100 -14 -2.97747 | opp_overlap 1208111, overlap 1208111 GGGGGATATCACAGA CAAAAGCCCGGTGG TTA CGTCCGGGCTTTTG TAAATGCAGTGGGGA TERM 1090 1208111 - 1208131 + r 86 -8.1 -4.42653 | opp_overlap 1208106 1208111 ATATCACAGACAAAA GCCCGGTGG TTA CGTCCGGGC TTTTGTAAATGCAGT TERM 1091 1208131 - 1208111 - R 88 -8.1 -4.63586 | opp_overlap 1208111, overlap 1208106 ATATCACAGACAAAA GCCCGGTGG TTA CGTCCGGGC TTTTGTAAATGCAGT TERM 1092 1208484 - 1208454 - R 100 -9.8 -5.40625 | opp_overlap 1208457 AGAGGAGATAAAAAA GGGGTGTAAAGGTT TTA AACATTTATACCCC TATACCCATTCGGCT Ava_1001 1209019 - 1208609 - | heterocyst formation protein HetP-like TERM 1093 1209662 - 1209674 + H 93 -3.3 -5.97575 | opp_overlap 1209663, overlap 1209663 TCCTACGATTAATTC AGCCA ATT TGGCA TTTTTTTTGTCCATT TERM 1094 1209663 - 1209673 + H 70 -6.8 -4.16105 | opp_overlap 1209663, overlap 1209662 CCTACGATTAATTCA GCCA ATT TGGC ATTTTTTTTGTCCAT Ava_1002 1210128 - 1211030 + | cation efflux protein TERM 1095 1213144 - 1213158 + G 70 -7.8 -3.61988 | CGCTGCTGCATTTTT CCCGTT TGG GACGGG TTGATTTATCCATGC Ava_1003 1211370 - 1213625 + | multi-sensor Signal transduction histidine kinase Ava_1004 1213708 - 1214163 + | response regulator receiver domain-containing protein Ava_1005 1214166 - 1216106 + | multi-sensor Signal transduction histidine kinase Ava_1006 1216453 - 1216262 - | hypothetical protein Ava_1007 1217332 - 1216559 - | imidazole glycerol phosphate synthase subunit HisF ruvB 1217486 - 1218586 + | Holliday junction DNA helicase B TERM 1096 1218922 - 1218908 - g 73 -5.7 -4.56969 | AAGGCCACAAATAAA GGTGA TTTTG TCACC GCAGAAAAGTATTGG Ava_1009 1218752 - 1219561 + | TPR repeat-containing protein Ava_1010 1221198 - 1219702 - | hypothetical protein Ava_1011 1221383 - 1222159 + | Short-chain dehydrogenase/reductase SDR Ava_1012 1223174 - 1222395 - | RNA-binding S4 Ava_1013 1223759 - 1223253 - | hypothetical protein Ava_1014 1224397 - 1224020 - | hypothetical protein Ava_1015 1226660 - 1224465 - | Outer membrane efflux protein TERM 1097 1226094 - 1226123 + g 81 -4.3 -5.36441 | GTGATTTGCTGTTGC CTGTAAAACCATT GGTA ACTGGGTTTGCAG TTTTTTCTGTGGCGC TERM 1098 1226197 - 1226210 + g 79 -6.7 -4.731 | opp_overlap 1226196, overlap 1226197 1226201 AGCAGCGTAGTAGAG GTAGC AGAA GCTAC TTTTGTTACTAACTT TERM 1099 1226476 - 1226493 + g 70 -2.7 -5.00895 | ATCTGGACTGTAGCA TTAGGCA GTTG TGTCTGA TTTTTGTCTACTAGC Ava_1016 1228324 - 1226765 - | circadian clock protein KaiC Ava_1017 1228725 - 1228399 - | circadian clock protein KaiB Ava_1018 1228979 - 1229362 + | transposase Ava_1019 1229404 - 1229772 + | transposase IS4 Ava_1020 1230051 - 1229782 - | circadian oscillation regulator TERM 1100 1229930 - 1229945 + g 95 -4.8 -5.83211 | GCACAAAATACTGCA TTGATA AATT TATCAA TTTTTTCTTTTAATG TERM 1101 1231809 - 1231797 - g 74 -7.7 -3.90922 | ATGTTGGTCAAAGAA GTACC ACA GGTAC AAATCATATTCAAGG TERM 1102 1231995 - 1232011 + G 70 -9.5 -2.79452 | overlap 1231994 ACGGACAGGAGCGAG TTTGGCA GTT TGCCAAA ATTCTGTTAGACAAT TERM 1103 1232864 - 1232877 + G 70 -3.8 -4.87665 | TTGTTACCACCTAGC CCAC CCAGCA GTGG TTTTTCTGAGTCGGA TERM 1104 1233248 - 1233237 - g 74 -4.4 -4.96501 | GGGCAGAAAAAGAAA TAGC CTTT GCTA ACCGCGCCGATGGTT Ava_1021 1230959 - 1234288 + | histidine kinase TERM 1105 1234585 - 1234573 - T 93 -7.7 -5.1963 | TTTAATTAACAAAAA TCCCT ATC AGGGA TTGAAACTGGTTTTT TERM 1106 1234656 - 1234644 - T 93 -7.7 -5.1963 | TTTAATTAACAAAAA TCCCT ATC AGGGA TTGAAACAACGTTAT TERM 1107 1234727 - 1234715 - T 93 -7.7 -5.1963 | TTTAATTAACAAAAA TCCCT ATC AGGGA TTGAAACCTGCGGTC TERM 1108 1234796 - 1234784 - T 93 -7.7 -5.1963 | TTTAATTAACAAAAA TCCCT ATC AGGGA TTGAAACCTAACATC TERM 1109 1234867 - 1234855 - T 93 -7.7 -5.1963 | TTTAATTAACAAAAA TCCCT ATC AGGGA TTGAAACTAAGGTTG TERM 1110 1234943 - 1234931 - T 93 -7.7 -5.1963 | TTTAATTAACAAAAA TCCCT ATC AGGGA TTGAAACTAACTTAT TERM 1111 1235014 - 1235002 - T 93 -7.7 -5.1963 | TTTAATTAACAAAAA TCCCT ATC AGGGA TTGAAACCAATAATT TERM 1112 1235085 - 1235073 - T 93 -7.7 -5.1963 | TTTAATTAACAAAAA TCCCT ATC AGGGA TTGAAACCAGTACAA TERM 1113 1235156 - 1235144 - T 93 -7.7 -5.1963 | TTTAATTAACAAAAA TCCCT ATC AGGGA TTGAAACAAGCGTAA TERM 1114 1235233 - 1235221 - T 93 -7.7 -5.1963 | TTTAATTAACAAAAA TCCCT ATC AGGGA TTGAAACAGGAACAA TERM 1115 1235303 - 1235291 - T 93 -7.7 -5.1963 | TTTAATTAACAAAAA TCCCT ATC AGGGA TTGAAACCGAATCCC TERM 1116 1235376 - 1235364 - T 93 -7.7 -5.1963 | opp_overlap 1235373 TTTAATTAACAAAAA TCCCT ATC AGGGA TTGAAACCAAACCCT TERM 1117 1235449 - 1235437 - T 93 -7.7 -5.1963 | TTTAATTAACAAAAA TCCCT ATC AGGGA TTGAAACCAATTAAT TERM 1118 1235522 - 1235510 - T 93 -7.7 -5.1963 | TTTAATTAACAAAAA TCCCT ATC AGGGA TTGAAACATGCTTAG TERM 1119 1235593 - 1235581 - T 93 -7.7 -5.1963 | TTTAATTAACAAAAA TCCCT ATC AGGGA TTGAAACTTAGTTTT TERM 1120 1235668 - 1235656 - T 93 -7.7 -5.1963 | TTTAATTAACAAAAA TCCCT ATC AGGGA TTGAAACAGACTAGT TERM 1121 1235739 - 1235727 - T 93 -7.7 -5.1963 | TTTAATTAACAAAAA TCCCT ATC AGGGA TTGAAACTGCGGCAA TERM 1122 1235813 - 1235801 - T 93 -7.7 -5.1963 | TTTAATTAACAAAAA TCCCT ATC AGGGA TTGAAACTCTTTGGC TERM 1123 1235883 - 1235871 - T 93 -7.7 -5.1963 | TTTAATTAACAAAAA TCCCT ATC AGGGA TTGAAACGAAGCATC TERM 1124 1235955 - 1235943 - T 93 -7.7 -5.1963 | TTTAATTAACAAAAA TCCCT ATC AGGGA TTGAAACACTAGTAC TERM 1125 1236028 - 1236016 - T 93 -7.7 -5.1963 | TTTAATTAACAAAAA TCCCT ATC AGGGA TTGAAACAATTATTT TERM 1126 1236099 - 1236087 - T 93 -7.7 -5.1963 | TTTAATTAACAAAAA TCCCT ATC AGGGA TTGAAACAAGTCGGT TERM 1127 1236173 - 1236161 - T 93 -7.7 -5.1963 | TTTAATTAACAAAAA TCCCT ATC AGGGA TTGAAACTTAGCTTA TERM 1128 1236252 - 1236240 - T 93 -7.7 -5.1963 | TTTAATTAACAAAAA TCCCT ATC AGGGA TTGAAACAGCAGATG TERM 1129 1236323 - 1236311 - T 93 -7.7 -5.1963 | TTTAATTAACAAAAA TCCCT ATC AGGGA TTGAAACCAGGAATT TERM 1130 1236393 - 1236381 - T 93 -7.7 -5.1963 | TTTAATTAACAAAAA TCCCT ATC AGGGA TTGAAACCTATATAG TERM 1131 1236464 - 1236452 - T 93 -7.7 -5.1963 | TTTAATTAACAAAAA TCCCT ATC AGGGA TTGAAACTAGAAAAG TERM 1132 1236536 - 1236524 - T 93 -7.7 -5.1963 | TTTAATTAACAAAAA TCCCT ATC AGGGA TTGAAACCATTAAAA TERM 1133 1236607 - 1236595 - T 93 -7.7 -5.1963 | TTTAATTAACAAAAA TCCCT ATC AGGGA TTGAAACCAGAAAAA TERM 1134 1236678 - 1236666 - T 93 -7.7 -5.1963 | TTTAATTAACAAAAA TCCCT ATC AGGGA TTGAAACCGCCTACG TERM 1135 1236749 - 1236737 - T 93 -7.7 -5.1963 | TTTAATTAACAAAAA TCCCT ATC AGGGA TTGAAACATCGCTTA TERM 1136 1236821 - 1236809 - T 93 -7.7 -5.1963 | TTTAATTAACAAAAA TCCCT ATC AGGGA TTGAAACAGCGCCTC TERM 1137 1236890 - 1236878 - T 93 -7.7 -5.1963 | TTTAATTAACAAAAA TCCCT ATC AGGGA TTGAAACCATTAAAA TERM 1138 1236961 - 1236949 - T 93 -7.7 -5.1963 | TTTAATTAACAAAAA TCCCT ATC AGGGA TTGAAACCAGAAAAA TERM 1139 1237032 - 1237020 - T 93 -7.7 -5.1963 | TTTAATTAACAAAAA TCCCT ATC AGGGA TTGAAACCGCCTACG TERM 1140 1237103 - 1237091 - T 93 -7.7 -5.1963 | TTTAATTAACAAAAA TCCCT ATC AGGGA TTGAAACATCGCTTA TERM 1141 1237175 - 1237163 - T 93 -7.7 -5.1963 | TTTAATTAACAAAAA TCCCT ATC AGGGA TTGAAATGGCGCAGC TERM 1142 1237280 - 1237246 - T 89 -12.2 -3.30701 | overlap 1237242 TTCGACGAAACCTAA CCCCAACCCCTTCCCT ACA AGGGAAGGGGCTAAAA ATCCACAACCAAGTA TERM 1143 1237317 - 1237339 + T 100 -19.2 -3.53761 | overlap 1237305 AATCAGGGTTTTAAG CCTCTCCCCG CGT CGGGGAGAGG TTTGGAGAGGGGTTA TERM 1144 1237408 - 1237396 - T 93 -7.7 -5.1963 | TTTAACTAACAAAAA TCCCT ATC AGGGA CTGAACAAACTCTTA Ava_1022 1238118 - 1237486 - | exopolysaccharide synthesis, ExoD TERM 1145 1237570 - 1237549 - G 72 -7.3 -3.93864 | ACCAATAAATGCAAA TACGGCTGT AATG ACAGCAGTA ACGACATAGCTGAGG TERM 1146 1237649 - 1237635 - G 85 -7.2 -4.89477 | TCGCTAATAATAAAA TACCTA CAG TAGGTA TCGGGTTAGTTAAGG Ava_1023 1239115 - 1238240 - | putative lipid kinase TERM 1147 1239415 - 1239373 - R 100 -16.7 -4.37092 | gap 2, opp_overlap 1239377 1239380 1239382, overlap 1239375 1239378 1239380 1239382 ATTGTCGCCATAAAA TACTATAGATCCCCGACTTCT CAA AGAAGTCGGGGATCTA--GTA TCTCACAAATTATTG TERM 1148 1239416 - 1239375 - R 100 -16.9 -3.79419 | gap 1, opp_overlap 1239377 1239380 1239382, overlap 1239373 1239378 1239380 1239382 TGTCGCCATAAAATA CTA-TAGATCCCCGACTTCT CAA AGAAGTCGGGGATCTAGTAT CTCACAAATTATTGA TERM 1149 1239377 - 1239413 + r 100 -21.1 -2.88758 | opp_overlap 1239373 1239375 1239378 1239380 1239382, overlap 1239380 1239382 TCGCCATAAAATACT ATAGATCCCCGACTTCT CAA AGAAGTCGGGGATCTAG TATCTCACAAATTAT TERM 1150 1239412 - 1239378 - R 100 -24.6 -2.98387 | opp_overlap 1239377 1239380 1239382, overlap 1239373 1239375 1239380 1239382 CGCCATAAAATACTA TAGATCCCCGACTTCT CAA AGAAGTCGGGGATCTA GTATCTCACAAATTA TERM 1151 1239410 - 1239380 - R 100 -22.8 -3.03972 | opp_overlap 1239377 1239380 1239382, overlap 1239378 1239373 1239375 1239382 CCATAAAATACTATA GATCCCCGACTTCT CAA AGAAGTCGGGGATC TAGTATCTCACAAAT TERM 1152 1239380 - 1239410 + r 100 -22.8 -2.6927 | opp_overlap 1239380 1239378 1239373 1239375 1239382, overlap 1239377 1239382 CCATAAAATACTATA GATCCCCGACTTCT CAA AGAAGTCGGGGATC TAGTATCTCACAAAT TERM 1153 1239382 - 1239408 + r 100 -19.6 -2.88999 | opp_overlap 1239382 1239380 1239378 1239373 1239375, overlap 1239380 1239377 ATAAAATACTATAGA TCCCCGACTTCT CAA AGAAGTCGGGGA TCTAGTATCTCACAA TERM 1154 1239408 - 1239382 - R 100 -19.6 -3.0641 | opp_overlap 1239380 1239377 1239382, overlap 1239380 1239378 1239373 1239375 ATAAAATACTATAGA TCCCCGACTTCT CAA AGAAGTCGGGGA TCTAGTATCTCACAA TERM 1155 1239501 - 1239452 - R 100 -9.5 -5.81412 | opp_overlap 1239459 1239466 GCTATTTAAAAAAAA GGTAGAAGATAAGTGGTAAAATC GGGT GATGTTACCTTTTATCTTTTACC TAAGTGCTAACAGTC TERM 1156 1239459 - 1239494 + r 75 -7 -4.20084 | opp_overlap 1239452, overlap 1239466 AAAAAAAAGGTAGAA GATAAGTGGTAAAATC GGGT GATGTTACCTTTTATC TTTTACCTAAGTGCT TERM 1157 1239466 - 1239487 + r 80 -5.9 -4.90471 | opp_overlap 1239452, overlap 1239459 AGGTAGAAGATAAGT GGTAAAATC GGGT GATGTTACC TTTTATCTTTTACCT Ava_1024 1240401 - 1239535 - | nitrate transport ATP-binding subunits C and D Ava_1025 1242539 - 1240536 - | nitrate transport ATP-binding subunits C and D Ava_1026 1243460 - 1242621 - | nitrate transport permease TERM 1158 1243512 - 1243502 - R 70 -5.4 -4.43477 | opp_overlap 1243508 CTTATGGAAGGAAAA CTTG ACT CAAG AGTGTAGCGATTCTC Ava_1027 1244950 - 1243574 - | bicarbonate transport system substrate-binding protein TERM 1159 1245068 - 1245089 + H 70 -8.9 -3.08464 | opp_overlap 1245061 1245060 AGTAAAACGATCCCC TCTATTTCT ATGC AGAAATAGA TTGAATCACTACTGA TERM 1160 1245276 - 1245259 - H 70 -3.5 -4.96646 | TTATATAAGTAAAAA TTTATCT TCGC AGACAAA AGTAGATATATTCAT Ava_1028 1245530 - 1246987 + | hypothetical protein TERM 1161 1247219 - 1247179 - f 84 -12.6 -2.52464 | gap 1 CTTTTTTCCAAGGTA GGCTTCGGCGTGAGCGCTC AGTC GAACGCTCACGCCGGA-CG AAATCGGAACGGTAG TERM 1162 1247639 - 1247661 + F 95 -8.5 -5.0133 | gap 1, opp_overlap 1247638 TAAAAACTACTTAAC TCAGGTGAGG ATTT CC-CACCTGA TTTTTTCGAGAAATA TERM 1163 1248050 - 1248020 - g 73 -8.4 -3.72989 | gap 1, overlap 1248022 AAACGTATAGGTAAA CACTGGGAAATGC ACGGCA GCATTCCCCAG-G CACAATGGGAACTAG TERM 1164 1248049 - 1248022 - g 91 -12.1 -3.4404 | overlap 1248020 ACGTATAGGTAAACA CTGGGAAATGC ACGGCA GCATTCCCCAG GCACAATGGGAACTA TERM 1165 1249031 - 1249058 + G 71 -8.4 -3.55084 | opp_overlap 1249035, overlap 1249028 1249032 GTAGTGGAAGTTGAT GGAACTCCCGTA ATGC TGCGGGGGTTCA TGTTTGATATTACCG TERM 1166 1249032 - 1249057 + G 83 -11.9 -2.72568 | opp_overlap 1249035, overlap 1249031 1249028 TAGTGGAAGTTGATG GAACTCCCGTA ATGC TGCGGGGGTTC ATGTTTGATATTACC TERM 1167 1251137 - 1251126 - g 70 -7.2 -3.82665 | overlap 1251118 TATTAGAGCAGGAAA CCCG CCAA CGGG AAGAACTCACTATCA TERM 1168 1251178 - 1251157 - g 70 -3.8 -4.77438 | ACTCACTATCAAAAA TTTTGCCT TAGAAC AAGCAAAA AGGGCAGCAGAAGCC Ava_1029 1247780 - 1253242 + | multi-sensor hybrid histidine kinase Ava_1030 1253239 - 1254231 + | response regulator receiver modulated diguanylate cyclase Ava_1031 1255279 - 1254275 - | glycerate kinase Ava_1032 1255641 - 1255309 - | hypothetical protein TERM 1169 1255792 - 1255816 + H 95 -14.3 -2.72829 | opp_overlap 1255783, overlap 1255792 ACTTAACCCCCCTAG CCCCCTTCCCT ACG AGGGAATGGGG GTTTCAAAGCCTCTC TERM 1170 1255792 - 1255817 + H 100 -14.1 -3.55071 | gap 1, opp_overlap 1255783, overlap 1255792 ACTTAACCCCCCTAG CCCCC-TTCCCT ACG AGGGAATGGGGG TTTCAAAGCCTCTCG TERM 1171 1255908 - 1255926 + H 85 -10.2 -3.84463 | opp_overlap 1255889, overlap 1255902 CTCTAAGTATCTGTA GGGTGGGC AAT GCCCAACC TTGTATATTTCTTGT Ava_1033 1256419 - 1257030 + | hypothetical protein TERM 1172 1257356 - 1257322 - f 100 -13 -4.41348 | opp_overlap 1257333, overlap 1257325 GTTGCGCCAAATAAA TGATGTAGAGACGTTG CAT CAACGTCTCTACAGTA CAGAATAAAGTGCAT TERM 1173 1257353 - 1257325 - f 100 -19.1 -3.18452 | opp_overlap 1257333, overlap 1257322 GCGCCAAATAAATGA TGTAGAGACGTTG CAT CAACGTCTCTACA GTACAGAATAAAGTG TERM 1174 1257651 - 1257670 + G 81 -7.2 -4.68593 | gap 1 GGCAAATGTTAGTTA CGG-GTGAT TGG ATCACGCCG TTTTTCAATGGTCAA TERM 1175 1258324 - 1258338 + G 85 -4.3 -5.50499 | TTGGCGTAATGGTGA GAGTT ATATC AACTC TTTTTTTGGATATCA TERM 1176 1258867 - 1258883 + G 73 -2.9 -5.20606 | overlap 1258870 1258880 GATCGGCGGCTGGCT TTGGCTC GCC GGGGCAA TTTTTGTTGCTGTTT TERM 1177 1258967 - 1258983 + G 70 -2.9 -4.91852 | GCGGCCTTTTTGCTA GTTGTCA CCA TGCCAGC TTTGTTTTTGATGGA Ava_1034 1257449 - 1259344 + | glycosyl transferase family protein TERM 1178 1259369 - 1259395 + F 100 -15.4 -5.00642 | opp_overlap 1259362 ATTGAAAGCTTCATA TCCCTAACTTTT CCA AAAAGTTAGGGA TTTTTATATGAATTC TERM 1179 1260299 - 1260271 - g 100 -12.5 -3.58269 | opp_overlap 1260256 1260274 1260280, overlap 1260275 GAACCTATTGTTAAA CCCAGAGAAGCTT CAA AAGCTTCTCCTGG TTCAACGGCTGGTAC TERM 1180 1260295 - 1260275 - g 88 -12.7 -2.64803 | opp_overlap 1260274 1260256 1260280, overlap 1260271 CTATTGTTAAACCCA GAGAAGCTT CAA AAGCTTCTC CTGGTTCAACGGCTG Ava_1035 1259665 - 1260969 + | hypothetical protein TERM 1181 1261516 - 1261529 + G 71 -6.7 -4.23213 | opp_overlap 1261515 GGTTCTTCAGCACAG GCACT GGTA AGTGC TTTATTGGGTCTAGC Ava_1036 1261177 - 1261794 + | hypothetical protein TERM 1182 1261858 - 1261831 - f 71 -9.2 -2.53581 | opp_overlap 1261834, overlap 1261834 CAGAGGTGCAATTGA CAATCCTTTGGC TAAA GCCAGAGGATTA TTGTTTTCAAAATCT TERM 1183 1261834 - 1261855 + F 90 -10.9 -4.20868 | opp_overlap 1261834 1261831 AGGTGCAATTGACAA TCCTTTGGC TAAA GCCAGAGGA TTATTGTTTTCAAAA TERM 1184 1261855 - 1261834 - f 73 -8.7 -3.42056 | opp_overlap 1261834, overlap 1261831 AGGTGCAATTGACAA TCCTTTGGC TAAA GCCAGAGGA TTATTGTTTTCAAAA Ava_1037 1261886 - 1262452 + | hypothetical protein Ava_1038 1263530 - 1262463 - | glycosyl transferase family protein Ava_1039 1264312 - 1263527 - | glycosyl transferase family protein Ava_1040 1265689 - 1264373 - | hypothetical protein TERM 1185 1265187 - 1265170 - G 76 -7.7 -4.16397 | TTGCAAAATAAAAGA CTGCTCC AGTA AGAGCAG GACTAATTTCGTTTA Ava_1041 1266956 - 1265694 - | glycosyl transferase, group 1 TERM 1186 1266763 - 1266744 - G 77 -5 -5.04385 | GATATGTCTAAAAAA TAGTTTCG GTAA CGAATCTA AATGGGGTTTAAGTT Ava_1042 1268704 - 1267052 - | methyltransferase FkbM Ava_1043 1269410 - 1268706 - | methyltransferase FkbM TERM 1187 1268829 - 1268814 - G 74 -4 -5.0133 | opp_overlap 1268814 TATTTCTTCAAAAAA TCTTGC TTCC ACAAGA ATATATTTAGGTTGA Ava_1044 1270753 - 1269431 - | polysaccharide biosynthesis protein Ava_1045 1273358 - 1271148 - | lipopolysaccharide biosynthesis TERM 1188 1272440 - 1272452 + g 79 -7.7 -4.26693 | overlap 1272434 CTCTTCCTTCTAGCT GCTCT TTG AGAGC TTGTTCTTTATTTAA TERM 1189 1273587 - 1273563 - H 85 -9.3 -4.09805 | opp_overlap 1273561 1273564, overlap 1273564 GGAGTAAGAATCAAA GCCTCTCTCCT TGT AGGAGAAAGGT ACTCTATGAGAAGAA TERM 1190 1273586 - 1273564 - H 88 -12.8 -3.0516 | opp_overlap 1273561 1273564, overlap 1273563 GAGTAAGAATCAAAG CCTCTCTCCT TGT AGGAGAAAGG TACTCTATGAGAAGA TERM 1191 1273564 - 1273586 + H 76 -10.6 -2.69151 | opp_overlap 1273564 1273563, overlap 1273561 GAGTAAGAATCAAAG CCTCTCTCCT TGT AGGAGAAAGG TACTCTATGAGAAGA TERM 1192 1274285 - 1274315 + H 83 -7 -4.74285 | overlap 1274286 AAAAGTTTTTGTCTA TCGAATTTACATAG ATT TTGTGTAAATTCGC TTTTATCTTGTGACT TERM 1193 1274286 - 1274314 + H 80 -10.5 -3.43486 | overlap 1274285 AAAGTTTTTGTCTAT CGAATTTACATAG ATT TTGTGTAAATTCG CTTTTATCTTGTGAC TERM 1194 1274391 - 1274369 - H 74 -9.2 -3.10112 | overlap 1274371 ATGTAAGGTAGGCAA CATCTAGGCA TTG TGCTTAGATG ACAGTCATTACACAA TERM 1195 1274427 - 1274443 + H 77 -8.1 -3.9243 | opp_overlap 1274426 1274427 GCTTATTTCAAAAAC CAGATAT TGT ATATCTG TTATTTAAAAAATTG TERM 1196 1274443 - 1274427 - H 70 -8.1 -3.3692 | opp_overlap 1274427, overlap 1274426 GCTTATTTCAAAAAC CAGATAT TGT ATATCTG TTATTTAAAAAATTG Ava_1046 1274851 - 1276260 + | sugar transferase Ava_1047 1276257 - 1277267 + | UDP-galactose 4-epimerase Ava_1048 1277582 - 1278655 + | metallophosphoesterase Ava_1049 1280008 - 1278788 - | hypothetical protein TERM 1197 1278902 - 1278891 - G 75 -2.2 -5.26316 | gap 1, overlap 1278892 CCACCGCAGAAAAAA CCACC TAC GG-GG ACATCTTGAATGTAA TERM 1198 1280269 - 1280235 - H 73 -8.6 -3.33708 | opp_overlap 1280231 1280228 1280245 1280247, overlap 1280227 1280236 TAATCGATACATCAA GCTACCCAACTAGCTG ATG CAGCTCATTAGGTAGA ATGGTGATTGATAGA TERM 1199 1280268 - 1280236 - H 83 -12.1 -2.59743 | opp_overlap 1280231 1280228 1280245 1280247, overlap 1280227 1280235 AATCGATACATCAAG CTACCCAACTAGCTG ATG CAGCTCATTAGGTAG AATGGTGATTGATAG TERM 1200 1280308 - 1280294 - H 85 -2.8 -5.9218 | opp_overlap 1280294, overlap 1280296 GATAGAACAAAAAAA TAGCAA CTT TTGCAA CTTTTCTATACTGTT TERM 1201 1280306 - 1280296 - H 73 -5.4 -4.57921 | opp_overlap 1280294, overlap 1280294 TAGAACAAAAAAATA GCAA CTT TTGC AACTTTTCTATACTG Ava_1050 1280352 - 1280588 + | hypothetical protein Ava_1051 1281039 - 1281632 + | hypothetical protein Ava_1052 1281673 - 1281969 + | hypothetical protein cbiD 1281999 - 1283111 + | cobalt-precorrin-6A synthase TERM 1202 1283624 - 1283635 + G 70 -5.8 -4.26589 | overlap 1283632 CAGAAATTTGGAATT TGGG AGTT CCCA TTTTGGGTGTCTGCT guaA 1283341 - 1284963 + | bifunctional GMP synthase/glutamine amidotransferase protein TERM 1203 1284985 - 1285007 + T 100 -12 -5.09426 | opp_overlap 1284980, overlap 1284988 TTTTAGACCATTAGG TGGGGTGGGC ATT GCCCACCTTA TTTTTTGAGATTCCG TERM 1204 1284988 - 1285004 + T 100 -13.7 -4.63993 | opp_overlap 1284980, overlap 1284985 TAGACCATTAGGTGG GGTGGGC ATT GCCCACC TTATTTTTTGAGATT TERM 1205 1285116 - 1285059 - T 85 -12.4 -3.03124 | opp_overlap 1285067, overlap 1285071 GTTTAGGCGGTAATA GGTAATAGCTAATGGGTAATTAGT TTTTACCATT ACCAATTACCCATCACCCATTACC AATCCTTAAAACTAT Ava_1055 1285829 - 1285143 - | alternative oxidase Ava_1056 1287481 - 1285982 - | Rieske (2Fe-2S) region Ava_1057 1288062 - 1287685 - | hypothetical protein TERM 1206 1288233 - 1288251 + r 74 -10.2 -2.6704 | opp_overlap 1288233 1288234, overlap 1288230 AGCAAAAATCAAAAA TGGTGGGC ATT GCCCACCC TACATTTGGACTTTA TERM 1207 1288251 - 1288233 - R 100 -10.2 -5.1971 | opp_overlap 1288230 1288233, overlap 1288234 AGCAAAAATCAAAAA TGGTGGGC ATT GCCCACCC TACATTTGGACTTTA TERM 1208 1288250 - 1288234 - R 100 -13.7 -3.69386 | opp_overlap 1288233 1288230, overlap 1288233 GCAAAAATCAAAAAT GGTGGGC ATT GCCCACC CTACATTTGGACTTT TERM 1209 1288296 - 1288310 + r 73 -8.6 -3.40611 | opp_overlap 1288286 1288285, overlap 1288294 TAAAGCCCAATTATT TGGGAA ATA TTCCCA TGTTATTAAACTAGA Ava_1058 1289086 - 1288316 - | hypothetical protein TERM 1210 1288368 - 1288355 - G 75 -3.1 -5.11033 | TACAATGGGAAAAAA GGCAT ACTC ATACC AAGCAGTCCAGATAA TERM 1211 1289532 - 1289494 - R 95 -8.2 -4.9448 | overlap 1289498 ATTGAGCAAACAAAA TGAATTCAGCCATGAG GACATCG CCCACGGCTGAACACA TTGAGAAATCATCCC TERM 1212 1289528 - 1289498 - R 85 -9.8 -3.89235 | overlap 1289494 AGCAAACAAAATGAA TTCAGCCATGAG GACATCG CCCACGGCTGAA CACATTGAGAAATCA Ava_1059 1290719 - 1289541 - | peptidase M20D, amidohydrolase TERM 1213 1289677 - 1289648 - G 81 -10.9 -3.37975 | gap 1 AGGGATGATTGATAA TTCGCTCAGG-GTA GCC TACACCTAAGCGAA ACATAGAACCAGGAA Ava_1060 1291492 - 1290899 - | hypothetical protein TERM 1214 1292245 - 1292270 + G 76 -7.6 -4.21314 | TGGCTATCCAGTTTT CTCGCGGTTG CCCCTT TAACTGCGAG TTTTGCGATATTATT Ava_1061 1291725 - 1293314 + | cobalamin B12-binding Ava_1062 1294319 - 1293696 - | NAD(P)H dehydrogenase (quinone) TERM 1215 1294819 - 1294779 - g 77 -8.3 -3.92641 | AAGTTTATGCACAAA TCCCCCCAAAGGTAGAATA TTC TTTAACACCTTTGGGGGAA AGCTTACAGCCAATT Ava_1063 1294550 - 1294882 + | transcriptional regulator Ava_1064 1295287 - 1294907 - | hypothetical protein Ava_1065 1295895 - 1295290 - | von Willebrand factor, type A Ava_1066 1296522 - 1295917 - | von Willebrand factor, type A Ava_1067 1296714 - 1297391 + | hypothetical protein Ava_1068 1297396 - 1297947 + | hypothetical protein Ava_1069 1299504 - 1297951 - | Na+/H+ antiporter TERM 1216 1299580 - 1299567 - H 70 -6.7 -4.11692 | overlap 1299569 CAGCCAGTTTGAAAA CATCC CAAG GGATG AGACGTTTTCATGAG Ava_1070 1299855 - 1301336 + | peptidase M50 Ava_1071 1302281 - 1301397 - | hypothetical protein TERM 1217 1302357 - 1302398 + r 100 -13.1 -4.40894 | opp_overlap 1302364, overlap 1302358 1302359 1302361 1302364 GCAATTTTTTGCAGC CCCATAAGCCACAGAAGAC TTAA GGCTTCTGTGGCTTATGAC TTTTACTATGGTTTC TERM 1218 1302358 - 1302397 + r 100 -16.6 -3.23452 | opp_overlap 1302364, overlap 1302357 1302359 1302361 1302364 CAATTTTTTGCAGCC CCATAAGCCACAGAAGAC TTAA GGCTTCTGTGGCTTATGA CTTTTACTATGGTTT TERM 1219 1302359 - 1302396 + r 100 -20.1 -2.52986 | opp_overlap 1302364, overlap 1302358 1302357 1302361 1302364 AATTTTTTGCAGCCC CATAAGCCACAGAAGAC TTAA GGCTTCTGTGGCTTATG ACTTTTACTATGGTT TERM 1220 1302361 - 1302394 + r 100 -16.9 -2.79239 | opp_overlap 1302364, overlap 1302359 1302358 1302357 1302364 TTTTTTGCAGCCCCA TAAGCCACAGAAGAC TTAA GGCTTCTGTGGCTTA TGACTTTTACTATGG TERM 1221 1302391 - 1302364 - R 100 -14.2 -3.31144 | opp_overlap 1302361 1302359 1302358 1302357 1302364 TTTGCAGCCCCATAA GCCACAGAAGAC TTAA GGCTTCTGTGGC TTATGACTTTTACTA TERM 1222 1302364 - 1302391 + r 100 -14.2 -3.53184 | opp_overlap 1302364, overlap 1302361 1302359 1302358 1302357 TTTGCAGCCCCATAA GCCACAGAAGAC TTAA GGCTTCTGTGGC TTATGACTTTTACTA Ava_1072 1303654 - 1302404 - | hypothetical protein TERM 1223 1303693 - 1303683 - H 73 -5.4 -4.63932 | CATCTGCTAAGAAAA CATG AAG CATG ACTGTAATAGTTAAG TERM 1224 1303724 - 1303771 + H 81 -8.6 -4.08317 | opp_overlap 1303748 CAGAAGTTGCACCAT TTTGTTAGCTTTTAGTGGTCAG AAGC CTTGCCATAAAAGGCTGACAAA TTTGCTTTAAACTTA TERM 1225 1303915 - 1303880 - H 73 -6.2 -4.41348 | overlap 1303883 GCTGCGCCAAATAAA TGATGTAGAGAAGTTG CATA CAACGTCTCTACAGTA CAGAACAAAGTGCAT TERM 1226 1303912 - 1303883 - H 87 -12.3 -3.18452 | overlap 1303880 GCGCCAAATAAATGA TGTAGAGAAGTTG CATA CAACGTCTCTACA GTACAGAACAAAGTG Ava_1073 1304190 - 1304687 + | WD repeat-containing protein TERM 1227 1304949 - 1304894 - f 80 -11.3 -3.14132 | gap 1, opp_overlap 1304891 1304890 CCCGGCTTGGAGCAA GTGGCGTTGGGCAATGCCCACC GGCTCATGGTTTT GGTGGGCATTGCCCACC-CTAC AAATACTTACTTTTT TERM 1228 1305245 - 1305258 + F 88 -8.1 -4.66938 | ATACTGAACTCTAGA CGCTG ATGT CAGCG TTTTATCTTAGGAAT Ava_1074 1305275 - 1307086 + | hypothetical protein TERM 1229 1307160 - 1307200 + F 100 -14.3 -4.32049 | opp_overlap 1307188 CACAAGTTCCTCATG TTTCTCGTTGAGAATAATT TGC AGTTAATCTCAGCGAGAAA TTTTGATGGATTGTC Ava_1075 1307206 - 1307826 + | small GTP-binding protein domain-containing protein Ava_1076 1307852 - 1309315 + | ferrous iron transport B-like Ava_1077 1309317 - 1309541 + | hypothetical protein Ava_1078 1310534 - 1309542 - | cyclopropane-fatty-acyl-phospholipid synthase TERM 1230 1310638 - 1310696 + H 100 -19.9 -2.70932 | gap 2, overlap 1310652 TAACTGTATGTAGTA --TGTAGGGTGGGCAATGCCCACCATATC CGG GTTTTGGTGGGCATTGCCTACCCTACAGA TACTTAGGAACACCA TERM 1231 1310652 - 1310680 + H 83 -11.7 -3.06796 | overlap 1310638 ATGTAGGGTGGGCAA TGCCCACCATATC CGG GTTTTGGTGGGCA TTGCCTACCCTACAG Ava_1079 1310919 - 1311362 + | hypothetical protein TERM 1232 1315132 - 1315114 - g 75 -5.2 -4.81685 | opp_overlap 1315126 ATGAACCAGCAAAAA GCCCTGGT AGA ATCAGGAC GCTGGTTATTGTATC Ava_1080 1311787 - 1315359 + | ferredoxin (flavodoxin) oxidoreductase TERM 1233 1315356 - 1315401 + F 73 -7.1 -4.04397 | overlap 1315353 1315357 1315360 1315362 ATATTTGGCAAATAG GTAATGGGTAATGGGTAATGG GTTG TTATTGCCTATTACCTATTAA TATTTTTGTCAGACT TERM 1234 1315357 - 1315400 + F 78 -10.6 -3.01915 | overlap 1315356 1315353 1315360 1315362 TATTTGGCAAATAGG TAATGGGTAATGGGTAATGG GTTG TTATTGCCTATTACCTATTA ATATTTTTGTCAGAC TERM 1235 1315362 - 1315395 + F 70 -8.3 -3.38068 | overlap 1315360 1315357 1315356 1315353 GGCAAATAGGTAATG GGTAATGGGTAATGG GTTG TTATTGCCTATTACC TATTAATATTTTTGT Ava_1081 1315483 - 1315866 + | hypothetical protein Ava_1082 1315881 - 1316255 + | hypothetical protein Ava_1083 1316364 - 1316618 + | hypothetical protein TERM 1236 1316930 - 1316912 - T 100 -10.3 -5.58074 | TAATTACCAAAAAAA GGGGTAG TATAT CTACCCC TCTACCGAACCAGGA Ava_1084 1319174 - 1316961 - | Alpha-glucan phosphorylase TERM 1237 1318071 - 1318061 - G 71 -6.8 -4.11216 | TCCGCAGGGCTAAAA CGGT CAT ACCG AAGGGTTCCCAAGGG Ava_1085 1319720 - 1320136 + | hypothetical protein TERM 1238 1320215 - 1320188 - T 77 -10 -3.2327 | opp_overlap 1320209, overlap 1320208 TTAATTGAGCATTAA TGTCCCAAAGTT TTTA AAATTTGGGACA TTCCCATTCACTAAT Ava_1086 1324622 - 1320327 - | multi-sensor hybrid histidine kinase TERM 1239 1321447 - 1321457 + g 75 -8.2 -3.84406 | TCTTTAATCCGGTTT GCCG CTT CGGC TTCTTCTCGTGAGGC Ava_1087 1325858 - 1325022 - | putative esterase Ava_1088 1326033 - 1326662 + | hypothetical protein Ava_1089 1327836 - 1326727 - | zinc-containing alcohol dehydrogenase superfamily protein avtA 1328115 - 1329398 + | valine--pyruvate transaminase rimM 1329402 - 1330103 + | 16S rRNA-processing protein Ava_1092 1330100 - 1330237 + | hypothetical protein Ava_1093 1330867 - 1330214 - | TetR family transcriptional regulator TERM 1240 1330935 - 1330893 - H 73 -5.8 -4.36914 | opp_overlap 1330893 1330895 1330914, overlap 1330895 TCGCCCTTGACAAAA CATGAACATTGTTCGTATAT TTT AAATATGAATAATGTTCATA TTTAATCAATTTTAT TERM 1241 1330893 - 1330935 + H 74 -8 -3.84887 | opp_overlap 1330893 1330895, overlap 1330895 1330914 TCGCCCTTGACAAAA CATGAACATTGTTCGTATAT TTT AAATATGAATAATGTTCATA TTTAATCAATTTTAT TERM 1242 1330895 - 1330933 + H 82 -10.6 -3.49778 | opp_overlap 1330893 1330895, overlap 1330893 1330914 GCCCTTGACAAAACA TGAACATTGTTCGTATAT TTT AAATATGAATAATGTTCA TATTTAATCAATTTT Ava_1094 1330968 - 1331666 + | hypothetical protein Ava_1095 1331699 - 1331932 + | hypothetical protein Ava_1096 1332051 - 1334465 + | hypothetical protein TERM 1243 1334533 - 1334557 + F 79 -8.5 -4.09805 | overlap 1334534 TAAAACCCCTCTCCA ACCTCTCCCCT GCA AGGAGAGAGGC TTTAATTATTACTCC TERM 1244 1334534 - 1334556 + F 85 -12 -3.0516 | overlap 1334533 AAAACCCCTCTCCAA CCTCTCCCCT GCA AGGAGAGAGG CTTTAATTATTACTC TERM 1245 1334676 - 1334641 - f 77 -9.8 -3.27298 | opp_overlap 1334638, overlap 1334644 1334645 GGCGTTAACTACTAA TAAGGGCTGTTAACAG TTGA CAGTTAACAGCCTTCA CGATGGATTTTGCAA TERM 1246 1334673 - 1334644 - f 81 -9.3 -3.77722 | opp_overlap 1334638, overlap 1334641 1334645 GTTAACTACTAATAA GGGCTGTTAACAG TTGA CAGTTAACAGCCT TCACGATGGATTTTG TERM 1247 1334672 - 1334645 - f 86 -12.8 -2.86151 | opp_overlap 1334638, overlap 1334644 1334641 TTAACTACTAATAAG GGCTGTTAACAG TTGA CAGTTAACAGCC TTCACGATGGATTTT TERM 1248 1335240 - 1335213 - f 90 -3.6 -5.95539 | opp_overlap 1335213 1335227 1335238, overlap 1335238 TTGCAAATAAAAAAA TAATTTTCCTGA TTTT TTAAGAAAATTA CTGTTGTAATAAATT TERM 1249 1336362 - 1336377 + G 73 -9 -3.41745 | opp_overlap 1336362 TATCAACCAATAGAA CCACCT GTAG AGGTGG TTAATGTTATCCCGA TERM 1250 1336377 - 1336362 - g 78 -9 -3.77119 | opp_overlap 1336362 TATCAACCAATAGAA CCACCT GTAG AGGTGG TTAATGTTATCCCGA TERM 1251 1337755 - 1337743 - g 76 -7.7 -4.08216 | opp_overlap 1337742 1337743 TGATGGGTGGGAAAA TGTCC TTG GGACA GTTTGTGGCTTTCAA Ava_1097 1335528 - 1338656 + | bacteriocin-processing peptidase TERM 1252 1339093 - 1339111 + F 70 -8.8 -3.09516 | opp_overlap 1339091, overlap 1339096 CAAACGCACAGTAGG CGAGGGGT CTA ACCCCTCA TTACCTAGTAAAAAA Ava_1098 1339687 - 1340166 + | heterocyst differentiation protein Ava_1099 1340747 - 1340190 - | hypothetical protein Ava_1100 1341951 - 1340857 - | hypothetical protein Ava_1101 1342450 - 1343088 + | hypothetical protein Ava_1102 1344610 - 1343237 - | response regulator receiver domain-containing protein Ava_1103 1345216 - 1345890 + | von Willebrand factor, type A Ava_1104 1345933 - 1346715 + | hypothetical protein TERM 1253 1347454 - 1347495 + G 100 -13.7 -4.45577 | GATTTATTTGGTTTA GGGGTGCTAATCTTCCAAC TGCT GATGGAAGGTACGCACCCC TTTTCTGGCATTTAT Ava_1105 1346818 - 1349016 + | TPR repeat-containing protein TERM 1254 1349129 - 1349146 + F 84 -11.3 -3.61398 | opp_overlap 1349119 1349121 1349131 TGAACCATCTGTAGA GACGCGA TTCA TCGCGTC TTCTTCACCCAAGGA TERM 1255 1349254 - 1349278 + F 71 -8.6 -3.25192 | opp_overlap 1349243, overlap 1349240 1349239 1349235 TATAGGGTGTGTTAT CACTTAGGGT AACGC ACCCTACGTG TATTGTAAAATTCCA TERM 1256 1350028 - 1350015 - g 71 -3.1 -4.92757 | TCATCAAGAACAAAA GAGTT TAGC AACCC TGACAGCAGTCCAAC Ava_1106 1349578 - 1350351 + | nucleotidyl transferase TERM 1257 1350339 - 1350327 - f 74 -7.7 -3.97307 | overlap 1350332 GTTATGGAAGAATAA CCAAG CTC CTTGG AAGGTTTGGTAATTA TERM 1258 1350583 - 1350565 - g 73 -3.9 -4.93296 | gap 1 TTAGTATTAGAAAAA GAAA-GCC AGTG GGCATTTC ACCAAACTGGTAATA TERM 1259 1351134 - 1351115 - g 77 -6.4 -4.68506 | opp_overlap 1351115 AACCAAGCGCAAAAA TTGTCCCC TTCC GGGGAGAA TATTACGAACTCACC Ava_1107 1350463 - 1351677 + | hypothetical protein Ava_1108 1351753 - 1352781 + | 3-beta hydroxysteroid dehydrogenase/isomerase Ava_1109 1353009 - 1354046 + | glycosyl transferase family protein Ava_1110 1354061 - 1354903 + | hypothetical protein Ava_1111 1354996 - 1356009 + | glycosyl transferase family protein Ava_1112 1356017 - 1356829 + | hypothetical protein Ava_1113 1356914 - 1357483 + | dTDP-4-dehydrorhamnose 3,5-epimerase Ava_1114 1357553 - 1358866 + | 3-hydroxyacyl-CoA dehydrogenase, NAD-binding TERM 1260 1359146 - 1359119 - f 100 -9.8 -4.82855 | overlap 1359120 TACCAAACTCAAAAA CGCCCCCCTTTT CATC AACAGGGGGGCT GAAGCTATCTGAAAA TERM 1261 1359145 - 1359120 - f 100 -13.3 -3.48629 | overlap 1359119 ACCAAACTCAAAAAC GCCCCCCTTTT CATC AACAGGGGGGC TGAAGCTATCTGAAA Ava_1115 1359383 - 1360471 + | glycosyl transferase, group 1 TERM 1262 1361363 - 1361329 - g 85 -4.4 -5.50723 | overlap 1361331 TTAGCAAAACAAAAA TCTTTAGAAGAGCAAT TAA ATCGTTCTCCCAAAAA TGCTTTAGTTACTTC TERM 1263 1362213 - 1362192 - g 70 -3.7 -4.87665 | overlap 1362195 TCTGATTTACAAAAA TATCGAGCT GTTA AACTCGGTA TCTAGCTTAAAGTCC Ava_1116 1360588 - 1362813 + | lipopolysaccharide biosynthesis TERM 1264 1362863 - 1362905 + F 76 -6.4 -4.39828 | overlap 1362864 CTTAGCTATATTTTT TGAT-TGTGCGATCGCACCC CATAA GAG-GCGATCGCACACATCC TTTTGTACCCATATT TERM 1265 1362864 - 1362904 + F 77 -9.9 -3.23174 | overlap 1362863 TTAGCTATATTTTTT GAT-TGTGCGATCGCACCC CATAA GAG-GCGATCGCACACATC CTTTTGTACCCATAT TERM 1266 1363292 - 1363280 - f 89 -7.7 -4.9725 | ATTTTTATAGAAAAA TCAGC GTT GCTGA ATCAGAGTATGAAAT Ava_1117 1363669 - 1364442 + | sugar transferase Ava_1118 1364894 - 1366714 + | ABC transporter, transmembrane region TERM 1267 1367007 - 1367029 + G 70 -5.5 -4.42386 | overlap 1367011 AATGCGGGGTTTGCG GCGGCGACT GGCGA AGTCGTAGC TTTTCTGGATGCAGA TERM 1268 1367606 - 1367635 + G 70 -3.6 -4.8048 | overlap 1367601 TCTCCGGGAGGTGTG GGCTATCTCA CGCTTAATAC TGGGATGGCC TTTTTACTCTGGGAA Ava_1119 1366773 - 1367741 + | glycosyl transferase family protein Ava_1120 1367861 - 1368835 + | glycosyl transferase family protein TERM 1269 1368846 - 1368872 + F 100 -16 -2.89191 | opp_overlap 1368830 1368848, overlap 1368848 TTTAATTCAGTCAGA TACCCGGCTTCT CTA AGAAGTCGGGTA TCTCTGGGGATCTAA TERM 1270 1368848 - 1368870 + F 100 -14.2 -2.99649 | opp_overlap 1368830 1368848, overlap 1368846 TAATTCAGTCAGATA CCCGGCTTCT CTA AGAAGTCGGG TATCTCTGGGGATCT TERM 1271 1368870 - 1368848 - f 84 -12 -2.92389 | opp_overlap 1368848 1368846, overlap 1368830 TAATTCAGTCAGATA CCCGGCTTCT CTA AGAAGTCGGG TATCTCTGGGGATCT Ava_1121 1368916 - 1369803 + | glycosyl transferase family protein Ava_1122 1370196 - 1371341 + | glycosyl transferase, group 1 Ava_1123 1371341 - 1372288 + | glycosyl transferase family protein Ava_1124 1372313 - 1373740 + | hypothetical protein Ava_1125 1376169 - 1373914 - | Cd/Co/Hg/Pb/Zn-translocating P-type ATPase TERM 1272 1374047 - 1374037 - G 71 -4 -4.87626 | TCCTAACAGTAAAAA CAAA GCT TTTG TGACTAGGGAAAATA Ava_1126 1376301 - 1376696 + | ArsR family transcriptional regulator TERM 1273 1376712 - 1376749 + F 85 -9.3 -4.17491 | gap 1 TTGTCTTAGTCCATG TGGC-TACGGCTATATTT ATC AAATTCAGCCGTAAGCCA TTTTCAGGCTTTAAT Ava_1127 1376956 - 1377333 + | hypothetical protein Ava_1128 1380293 - 1377432 - | ABC transporter, transmembrane region TERM 1274 1379434 - 1379455 + g 71 -4.3 -4.84359 | ACTCGCTGGAGATTT TCCGAACTC AATG GAGGGCGGA TTTTTATCCCCATAG TERM 1275 1380387 - 1380422 + r 90 -12.6 -3.1552 | gap 1, overlap 1380391 TCCCCCTGCTTCCCC GAAGTTCGCCCGGAGGG AAA CCCTCCTTGCG-ACTTC TCTTCCTGCCTCCCC TERM 1276 1380391 - 1380419 + r 78 -8.7 -3.71998 | overlap 1380387 CCTGCTTCCCCGAAG TTCGCCCGGAGGG AAA CCCTCCTTGCGAC TTCTCTTCCTGCCTC Ava_1129 1382705 - 1380459 - | ABC transporter, transmembrane region TERM 1277 1381801 - 1381775 - G 75 -2.2 -5.31456 | opp_overlap 1381778, overlap 1381776 1381778 CCAAGGCATAAAAAA GCACCATCAATG TAT CAATGATGGTTG TTGCTAATTGTCCCG TERM 1278 1381778 - 1381798 + g 75 -8.3 -3.78793 | opp_overlap 1381776 1381775 1381778 AGGCATAAAAAAGCA CCATCAATG TAT CAATGATGG TTGTTGCTAATTGTC TERM 1279 1381798 - 1381778 - G 71 -8.3 -3.45403 | opp_overlap 1381778, overlap 1381776 1381775 AGGCATAAAAAAGCA CCATCAATG TAT CAATGATGG TTGTTGCTAATTGTC TERM 1280 1382301 - 1382313 + g 74 -10.5 -2.73364 | opp_overlap 1382293 TGATACATGACGCGG CCCCG TAG CGGGG TCATTGAGATAAACC Ava_1130 1384137 - 1382692 - | secretion protein HlyD TERM 1281 1384380 - 1384363 - H 76 -2.1 -5.47218 | gap 1, opp_overlap 1384363 TTGTAGCTAAAAAAA CAACAGTA ATA TACT-TTG TGCTGTTAGCTTTAC Ava_1131 1384411 - 1384761 + | nitrile hydratase-like TERM 1282 1384806 - 1384847 + F 79 -8.3 -4.13437 | gap 1 GAGATATAAATTCTA TCTTAGTGAACTGCAA-ATA GAA TATATTGTGGTTCGCTAGGA TTCTCTTTTTGCTTG Ava_1132 1384929 - 1386434 + | hypothetical protein Ava_1133 1386495 - 1388465 + | radical SAM family protein Ava_1134 1389672 - 1388578 - | cyclic nucleotide-binding domain-containing protein Ava_1135 1390898 - 1389741 - | hypothetical protein Ava_1136 1391694 - 1390903 - | cell division inhibitor Ava_1137 1393121 - 1391745 - | histidine kinase, HAMP region TERM 1283 1393149 - 1393139 - R 88 -5.4 -5.68438 | TGACCAAATAAAAAA GGAT ACA ATCC CCTGAATTTATTTAT TERM 1284 1393197 - 1393222 + r 78 -7.5 -4.24432 | opp_overlap 1393194 1393199, overlap 1393194 1393199 1393200 AAACAACATTAATTC AAGCCCACGGA TAAA TCCGTGGGGTC TTTAATTTTGAATTT TERM 1285 1393220 - 1393199 - R 77 -10.1 -3.24381 | opp_overlap 1393199 1393197 1393194 1393200, overlap 1393194 ACAACATTAATTCAA GCCCACGGA TAAA TCCGTGGGG TCTTTAATTTTGAAT TERM 1286 1393199 - 1393220 + r 84 -10.1 -3.70102 | opp_overlap 1393194 1393199, overlap 1393197 1393194 1393200 ACAACATTAATTCAA GCCCACGGA TAAA TCCGTGGGG TCTTTAATTTTGAAT TERM 1287 1393200 - 1393219 + r 100 -13.6 -2.80977 | opp_overlap 1393199 1393194, overlap 1393199 1393197 1393194 CAACATTAATTCAAG CCCACGGA TAAA TCCGTGGG GTCTTTAATTTTGAA Ava_1138 1394182 - 1393352 - | AraC family transcriptional regulator Ava_1139 1395825 - 1394725 - | glycosyl transferase, group 1 TERM 1288 1395910 - 1395946 + r 100 -23.3 -3.40073 | opp_overlap 1395917, overlap 1395911 AGATCCCGGACTTCT TCAGATACCCGACTTCT TGA AGAAGTCGGGTATCTGG TTAATTCATCCAGGT TERM 1289 1395911 - 1395945 + r 100 -24.6 -2.63723 | opp_overlap 1395917, overlap 1395910 GATCCCGGACTTCTT CAGATACCCGACTTCT TGA AGAAGTCGGGTATCTG GTTAATTCATCCAGG TERM 1290 1395939 - 1395917 - R 100 -16.4 -2.87564 | opp_overlap 1395911 1395910 GGACTTCTTCAGATA CCCGACTTCT TGA AGAAGTCGGG TATCTGGTTAATTCA Ava_1140 1398183 - 1395952 - | hypothetical protein TERM 1291 1396243 - 1396258 + g 75 -3.2 -5.23943 | overlap 1396245 ATTATAAGGAAGCAC TATCCG CCAC CGGAGA TTTCTTTTTTTACTC TERM 1292 1398603 - 1398642 + r 91 -9.4 -4.43272 | gap 1, opp_overlap 1398603, overlap 1398606 1398607 1398610 ACGCTAAAAAACCTA TTA-TTTCGTAGGGTGGGC AAT GCCCACCCTACTAGCTTAA TTTTGAATTTTGAAT TERM 1293 1398606 - 1398638 + r 95 -12.7 -3.74303 | opp_overlap 1398603, overlap 1398603 1398607 1398610 CTAAAAAACCTATTA TTTCGTAGGGTGGGC AAT GCCCACCCTACTAGC TTAATTTTGAATTTT TERM 1294 1398607 - 1398637 + r 100 -16.2 -2.82955 | opp_overlap 1398603, overlap 1398606 1398603 1398610 TAAAAAACCTATTAT TTCGTAGGGTGGGC AAT GCCCACCCTACTAG CTTAATTTTGAATTT TERM 1295 1398610 - 1398634 + r 100 -20.1 -2.66118 | opp_overlap 1398603, overlap 1398607 1398606 1398603 AAAACCTATTATTTC GTAGGGTGGGC AAT GCCCACCCTAC TAGCTTAATTTTGAA Ava_1141 1399273 - 1398734 - | hypothetical protein Ava_1142 1400388 - 1399270 - | aminoglycoside phosphotransferase TERM 1296 1400498 - 1400457 - H 100 -13.3 -3.65581 | gap 1, opp_overlap 1400467, overlap 1400461 1400465 1400467 AGTAACTCGTAATAA GTCATAGATACCCGACTTTT TTA AAAAGTCGGGTATCTGC-AC ACCTGCAACCCGTGA TERM 1297 1400495 - 1400461 - H 100 -17.4 -2.65808 | opp_overlap 1400467, overlap 1400457 1400465 1400467 ACTCGTAATAAGTCA TAGATACCCGACTTTT TTA AAAAGTCGGGTATCTG CACACCTGCAACCCG TERM 1298 1400491 - 1400465 - H 100 -16.8 -2.98169 | opp_overlap 1400467, overlap 1400461 1400457 1400467 GTAATAAGTCATAGA TACCCGACTTTT TTA AAAAGTCGGGTA TCTGCACACCTGCAA TERM 1299 1400467 - 1400489 + H 100 -15 -2.87564 | opp_overlap 1400467 1400465 1400461 1400457 AATAAGTCATAGATA CCCGACTTTT TTA AAAAGTCGGG TATCTGCACACCTGC TERM 1300 1400489 - 1400467 - H 100 -15 -3.03854 | opp_overlap 1400467, overlap 1400465 1400461 1400457 AATAAGTCATAGATA CCCGACTTTT TTA AAAAGTCGGG TATCTGCACACCTGC Ava_1143 1400667 - 1402421 + | surface antigen (D15) Ava_1144 1402731 - 1402429 - | hypothetical protein TERM 1301 1402495 - 1402477 - G 79 -6.6 -4.60255 | opp_overlap 1402492 AGAACTCTGCAAAAA CTGGGGCG ACT CACCCAAG TCCTGGACTTCTCCA TERM 1302 1402499 - 1402510 + g 74 -4.4 -5.00196 | overlap 1402492 GACTCACCCAAGTCC TGGA CTTC TCCA TTTTGTTCTTTCAGC TERM 1303 1402901 - 1402922 + H 76 -4.4 -5.09762 | overlap 1402906 TGACCACTGACAAAA CTCTATCC CCCTGT GGGTGGAG TTTTTATCTTCCAGT Ava_1145 1403022 - 1403258 + | hypothetical protein Ava_1146 1403287 - 1403553 + | hypothetical protein TERM 1304 1403587 - 1403629 + T 78 -7.6 -4.24606 | opp_overlap 1403584 1403583 1403594 AAGCTGAAATACGCG TAGGCAATGCCCACCAAAGC CAT GATACGGTTGGCATTGCCCA TTTTACATATCCCTT murE 1405133 - 1403643 - | UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase TERM 1305 1404946 - 1404932 - G 73 -10 -2.94416 | overlap 1404935 CAGCTTGAGGAGAGA CGATCG CCG CGATCG CTCCTGAGGCGATCG Ava_1148 1405453 - 1405166 - | glutaredoxin 2 TERM 1306 1405705 - 1405674 - H 100 -14 -3.01712 | overlap 1405679 GGGGGTTTGGTAATA GGTAATTGGTAACA GGTC TATTACCAATTACC ACAGCGCCAGGGTGG TERM 1307 1405711 - 1405721 + H 76 -6.8 -4.42386 | ACCAATTACCACAGC GCCA GGG TGGC TTTTCTCCCTACCAA TERM 1308 1406364 - 1406354 - g 74 -6.8 -4.32067 | opp_overlap 1406354, overlap 1406351 GATGGGATAAAACAA GAGG TTA CCTC TGAATTAAAGCCCAT Ava_1149 1405817 - 1407232 + | histidine kinase TERM 1309 1407318 - 1407274 - f 77 -10.1 -3.28712 | opp_overlap 1407280 CCTGTTGGTTGACAA CTGCACTTGTAGAGCGACAAA TAA TTTGTCGTTCTACAATTGTCG ATTGCCAAATTATAT TERM 1310 1407280 - 1407312 + F 100 -17.3 -3.41878 | opp_overlap 1407274 GGTTGACAACTGCAC TTGTAGAGCGACAAA TAA TTTGTCGTTCTACAA TTGTCGATTGCCAAA TERM 1311 1407373 - 1407399 + F 100 -18.2 -4.19746 | opp_overlap 1407378, overlap 1407378 TCAAAATATTATCCT CAAAACCCTTGC CAA GCAAGGGTTTTG TTATTTTAGGCTCAA TERM 1312 1407394 - 1407378 - f 93 -12.3 -4.12456 | opp_overlap 1407373 1407378 ATATTATCCTCAAAA CCCTTGC CAA GCAAGGG TTTTGTTATTTTAGG TERM 1313 1407378 - 1407394 + F 100 -12.3 -5.093 | opp_overlap 1407378, overlap 1407373 ATATTATCCTCAAAA CCCTTGC CAA GCAAGGG TTTTGTTATTTTAGG Ava_1150 1407584 - 1409266 + | integrase catalytic subunit Ava_1151 1409270 - 1410106 + | hypothetical protein Ava_1152 1410106 - 1410609 + | hypothetical protein Ava_1153 1412056 - 1410992 - | Serine/threonine protein kinase TERM 1314 1411601 - 1411623 + g 76 -9.2 -3.4493 | opp_overlap 1411599 TTGATCGAGTGAATC TGATTGCCCA AAA TCGGCAATCA TTGGTTGATCTGTGT Ava_1154 1412527 - 1412057 - | hypothetical protein TERM 1315 1412542 - 1412566 + r 76 -5.9 -4.71418 | opp_overlap 1412546 TAGATTCTATTTCAC TTAACTTTATT TTT AATTAAGTTAA TTTCTTTTACATATT TERM 1316 1412573 - 1412596 + r 72 -4 -4.96106 | TTAAGTTAATTTCTT TTACATATTT TGAT AAATTTGTAA TTTTTGCTCTTTCTC Ava_1155 1412908 - 1412573 - | metal-dependent hydrolase-like Ava_1156 1415916 - 1412992 - | Type I site-specific deoxyribonuclease HsdR Ava_1157 1418001 - 1415938 - | transcriptional regulator Ava_1158 1419383 - 1418019 - | restriction modification system DNA specificity subunit TERM 1317 1418394 - 1418419 + g 100 -9.1 -4.65895 | opp_overlap 1418394, overlap 1418396 TTCAAAGTCAGGTAA TGCGACCTTAT TTAA ATAAGGTCGGA TTTTTGAATAAAGAA TERM 1318 1418396 - 1418417 + g 80 -11.7 -2.63208 | opp_overlap 1418394, overlap 1418394 CAAAGTCAGGTAATG CGACCTTAT TTAA ATAAGGTCG GATTTTTGAATAAAG Ava_1159 1420930 - 1419380 - | N-6 DNA methylase Ava_1160 1421402 - 1420950 - | MerR family transcriptional regulator Ava_1161 1421472 - 1423400 + | hypothetical protein TERM 1319 1423503 - 1423520 + F 72 -8.5 -3.60798 | overlap 1423499 AATGTGGGTTAGTTT GACTGTT GGAA AACAGTC TTGCTTTCTGACCCT Ava_1162 1424494 - 1425369 + | lipoyl synthase TERM 1320 1425819 - 1425843 + G 70 -3.5 -4.76075 | gap 1, opp_overlap 1425779, overlap 1425823 TAGTCGTATAGCTAC TGCC-GCCGC TACAGT GCAGCTGGCA TTTTCTTCATCTCGT Ava_1163 1425421 - 1426344 + | NAD-dependent glycerol-3-phosphate dehydrogenase-like Ava_1164 1426867 - 1428117 + | RNA polymerase sigma factor SigC TERM 1321 1429032 - 1429012 - g 77 -6.1 -4.67234 | ATTCAATCTTAAAAA TTGGGGCAA AAA CTGCCCAAA AAGAAGGTTTTCACC Ava_1165 1428660 - 1429115 + | ferric uptake regulator family protein TERM 1322 1429263 - 1429231 - T 80 -6.4 -4.84274 | gap 2, opp_overlap 1429238, overlap 1429233 1429234 1429238 GAATCATAGTAAAAA CATGGAAGCGGATGCT AAA AGCGTCCGCTTC--TG ACATCAGTTAGACTG TERM 1323 1429263 - 1429233 - T 79 -8.2 -4.02905 | opp_overlap 1429238, overlap 1429231 1429234 1429238 ATCATAGTAAAAACA TGGAAGCGGATGCT AAA AGCGTCCGCTTCTG ACATCAGTTAGACTG TERM 1324 1429262 - 1429234 - T 83 -11.7 -3.00658 | opp_overlap 1429238, overlap 1429231 1429233 1429238 TCATAGTAAAAACAT GGAAGCGGATGCT AAA AGCGTCCGCTTCT GACATCAGTTAGACT TERM 1325 1429238 - 1429258 + T 95 -13.3 -3.33969 | opp_overlap 1429234 1429231 1429233 1429238 AGTAAAAACATGGAA GCGGATGCT AAA AGCGTCCGC TTCTGACATCAGTTA TERM 1326 1429258 - 1429238 - T 82 -11.1 -3.33434 | opp_overlap 1429238, overlap 1429234 1429231 1429233 AGTAAAAACATGGAA GCGGATGCT AAA AGCGTCCGC TTCTGACATCAGTTA Ava_1166 1430483 - 1429245 - | peptidoglycan binding domain-containing protein TERM 1327 1430018 - 1430028 + g 79 -3.2 -5.38249 | TTCTGACTTGAGTAG CAGT TGT GCTG TTTTTTCTCGTTGAT cobN 1434368 - 1430502 - | cobaltochelatase TERM 1328 1434116 - 1434087 - G 71 -9.3 -3.01269 | overlap 1434082 AACTTCTAAACCATA CGCCCAATAGGAA CGTC CTCCTAGTAGGCG CAAAATAATTACCTG Ava_1168 1434453 - 1436483 + | multi-sensor Signal transduction histidine kinase Ava_1169 1437492 - 1436584 - | hypothetical protein Ava_1170 1437625 - 1438527 + | metallophosphoesterase TERM 1329 1439353 - 1439316 - g 80 -11.3 -2.57344 | opp_overlap 1439323, overlap 1439304 1439315 TATTGGGTGGAGAAG CCCAGCACGGTGTGA TTGTCCTC TCACCCCGTGCTGTG GAAAGACTCCAAACT Ava_1171 1438715 - 1439893 + | phosphoserine aminotransferase TERM 1330 1439913 - 1439953 + F 100 -16.6 -4.11484 | opp_overlap 1439915 1439920 ATTCGTAATTGCTAA TACGTAATTCGTAATTAA CACTC TTAATTACGAATTGCGTA TTTTAAACAATTGAG TERM 1331 1439951 - 1439915 - f 88 -12.6 -3.06261 | opp_overlap 1439913, overlap 1439920 TCGTAATTGCTAATA CGTAATTCGTAATTAA CACTC TTAATTACGAATTGCG TATTTTAAACAATTG TERM 1332 1439946 - 1439920 - f 77 -9.7 -3.18728 | opp_overlap 1439913, overlap 1439915 ATTGCTAATACGTAA TTCGTAATTAA CACTC TTAATTACGAA TTGCGTATTTTAAAC TERM 1333 1441560 - 1441583 + G 71 -8.2 -3.53563 | opp_overlap 1441560 AGATACTATGAAAAT CTTGCGGAAA GAAA TTTTCGCAGG TTTAGGGACGGCTGT Ava_1172 1440517 - 1441869 + | divalent cation transporter Ava_1173 1442040 - 1443110 + | hypothetical protein TERM 1334 1443921 - 1443906 - g 74 -4.6 -4.84359 | opp_overlap 1443905 1443906 1443908 TTACGCTTACAAAAA GAGCGG ATGA CTGCTC ATTTATTACCCAGTT pyrB 1443153 - 1444154 + | aspartate carbamoyltransferase catalytic subunit TERM 1335 1444364 - 1444344 - T 78 -9 -3.70102 | gap 1, opp_overlap 1444344 1444353, overlap 1444342 1444345 ATTCAAAATTAAAGA CCCCACGGA TAAA TCCG-GGGG ATTGAATTAATGTTG TERM 1336 1444364 - 1444345 - T 73 -9.2 -2.80977 | opp_overlap 1444344 1444353, overlap 1444344 1444342 TTCAAAATTAAAGAC CCCACGGA TAAA TCCGGGGG ATTGAATTAATGTTG TERM 1337 1444460 - 1444409 - T 90 -8.8 -4.55295 | gap 1, opp_overlap 1444420, overlap 1444413 1444424 TTCGCCATAAATAAA TTTAGCGCGAAG-TCAGATCGGAGG TTT CCTCCGATCTGAACTTCGTAAGAGA GGGGCTTGTATCCTT TERM 1338 1444456 - 1444413 - T 100 -14 -2.82776 | gap 1, opp_overlap 1444420, overlap 1444409 1444424 CCATAAATAAATTTA GCGCGAAG-TCAGATCGGAGG TTT CCTCCGATCTGAACTTCGTAA GAGAGGGGCTTGTAT TERM 1339 1444420 - 1444449 + T 100 -15.9 -3.14132 | gap 1, opp_overlap 1444413 1444409 1444424 TAAATTTAGCGCGAA G-TCAGATCGGAGG TTT CCTCCGATCTGAAC TTCGTAAGAGAGGGG TERM 1340 1444444 - 1444424 - T 100 -15.5 -2.53263 | opp_overlap 1444420, overlap 1444413 1444409 TTTAGCGCGAAGTCA GATCGGAGG TTT CCTCCGATC TGAACTTCGTAAGAG TERM 1341 1444531 - 1444496 - T 93 -12 -4.15044 | opp_overlap 1444507, overlap 1444499 GTTCGGTCGAATAAA TGATGTAGAGACGTTG CATG CAACGTCTCTACAGTA CAGAATGAAGTGCAT TERM 1342 1444528 - 1444499 - T 100 -18.1 -3.10244 | opp_overlap 1444507, overlap 1444496 CGGTCGAATAAATGA TGTAGAGACGTTG CATG CAACGTCTCTACA GTACAGAATGAAGTG Ava_1175 1445683 - 1444565 - | histidine kinase Ava_1176 1446097 - 1446351 + | hypothetical protein TERM 1343 1447735 - 1447756 + G 83 -8.8 -4.18494 | GCGGCTGCAAGCTTC TTCCCAGT TATTGT ACTGGGAA TTTTCGATAAGCGTA Ava_1177 1446361 - 1448040 + | Na+/solute symporter Ava_1178 1448951 - 1448109 - | TPR repeat-containing protein TERM 1344 1449431 - 1449482 + G 100 -14.6 -4.56775 | gap 1, overlap 1449434 AAGTTATCTGTTGAG AC-TGGGTGTAGGGGTGTAAGGGTT TTA AACATTTACACCCCTACACCCTTGA TTTTTCCAAGCCCAT TERM 1345 1449434 - 1449478 + G 100 -25.3 -3.80855 | overlap 1449431 TTATCTGTTGAGACT GGGTGTAGGGGTGTAAGGGTT TTA AACATTTACACCCCTACACCC TTGATTTTTCCAAGC Ava_1179 1449389 - 1449565 + | hypothetical protein TERM 1346 1449673 - 1449685 + T 78 -7.7 -4.33808 | GTTGTTCCCTAAGCG TACCC ACA GGGTA TTTTGAATTGATTTC Ava_1180 1450374 - 1449706 - | methionine sulfoxide reductase A Ava_1181 1452755 - 1450461 - | hypothetical protein Ava_1182 1452843 - 1454246 + | proton extrusion protein PcxA TERM 1347 1454285 - 1454298 + F 74 -3.9 -5.20216 | ATGATCTCTGCCTCA CTATA TTTG TATAG TTTTTTACTCATCTC TERM 1348 1454449 - 1454470 + F 93 -6.6 -5.48213 | opp_overlap 1454449 TAACTACTGACAAAA CTCTATCC CCTTGT GGGTAGAG TTTTTATTTTAGCTA TERM 1349 1455334 - 1455348 + G 71 -8.6 -3.57161 | AACGGATGTTGGGTT GCAGAA AGT TTCTGC TTATACTTACTGTTT Ava_1183 1455200 - 1455649 + | hypothetical protein Ava_1184 1456174 - 1456521 + | XRE family transcriptional regulator TERM 1350 1456549 - 1456578 + T 74 -9.5 -3.09925 | gap 1, overlap 1456547 1456546 AATTATCACCTCCGA CCAATTACT-GGCA TTA TGCTTAGTAATTGG TAATTGTTTATCTGT Ava_1185 1457310 - 1456600 - | polysaccharide deacetylase TERM 1351 1457228 - 1457204 - G 77 -8.6 -3.92659 | overlap 1457198 1457219 TCGTCAAAAGTCAAA GCGATCGC TTGACAATG GCGATCGC CACTCCAAAGACAGC Ava_1186 1458616 - 1457333 - | glycosyl transferase, group 1 TERM 1352 1458264 - 1458239 - G 74 -6.1 -4.45083 | overlap 1458242 1458244 GGGACACTTATAAAA CAATCCCAGCA GAGT TGCTGGTAGTG AAACTAAAAGTGGCG TERM 1353 1458261 - 1458242 - G 72 -6.4 -4.33785 | overlap 1458239 1458244 ACACTTATAAAACAA TCCCAGCA GAGT TGCTGGTA GTGAAACTAAAAGTG TERM 1354 1458333 - 1458321 - G 74 -7.7 -4.07568 | CTTTCGCCGTTAAAA GCTTG TGG CAAGC TAGTGAAGATAAAAC Ava_1187 1459777 - 1459538 - | hypothetical protein TERM 1355 1459963 - 1459996 + H 100 -17.7 -3.75292 | opp_overlap 1459942 1459958 1459956 ACATAAAATCTTTCG GGGGTTAACTTCTGT GTAA ATAGAAGTTAACCCC TTATTAATACTCAGT TERM 1356 1463427 - 1463413 - g 74 -10 -3.07113 | overlap 1463424 TATGAGCTTACCCAA CGGGTA TAA TACCCG CGTCGGCGAGCGTGG Ava_1188 1460750 - 1463761 + | cyclic nucleotide-regulated ABC bacteriocin/lantibiotic exporters TERM 1357 1463991 - 1464011 + G 78 -9.7 -3.5518 | opp_overlap 1463990 GTCACGCACAATTAT GCTCACCCT GAT AGGGTTAGC TTGTGTAGGTATTGG TERM 1358 1465060 - 1465029 - g 75 -7.4 -4.4078 | opp_overlap 1465029 1465028 1465052 CGTCCCTAATGAAAA CTTTATTGCTGAGG TTTT CATCACCAATAAAG ATATTGGTTTTGTCC TERM 1359 1465052 - 1465067 + G 72 -6.2 -4.36914 | opp_overlap 1465029, overlap 1465029 1465028 CTGAGGTTTTCATCA CCAATA AAGA TATTGG TTTTGTCCGCAAAGG Ava_1189 1463809 - 1465380 + | secretion protein HlyD Ava_1190 1465544 - 1466038 + | hypothetical protein TERM 1360 1466051 - 1466066 + T 70 -2.5 -5.08824 | TGAAACGTTTTTTAG CGCCT GGCTGA AGGTG TTTTTTCAGTAGCAA Ava_1191 1467180 - 1466047 - | osmosensitive K+ channel histidine kinase sensor subunit Ava_1192 1467849 - 1467250 - | K+ transporting ATPase, KdpC subunit TERM 1361 1467954 - 1468000 + r 75 -8.8 -3.5393 | overlap 1467955 AAATGTTCTATTGGG ATTGTTGACCGTTGACGGTTCA CCG TTAACAGGTAACGGTCAACAAC TTTAAACAGAATAAT TERM 1362 1467955 - 1467999 + r 83 -12.3 -2.72144 | overlap 1467954 AATGTTCTATTGGGA TTGTTGACCGTTGACGGTTCA CCG TTAACAGGTAACGGTCAACAA CTTTAAACAGAATAA Ava_1193 1468425 - 1468129 - | K+-transporting ATPase, F subunit Ava_1194 1470687 - 1468510 - | potassium-transporting ATPase subunit B Ava_1195 1472472 - 1470787 - | potassium-transporting ATPase subunit A TERM 1363 1472082 - 1472062 - G 82 -6.9 -4.87626 | opp_overlap 1472071 1472073 GGTGAACATCAAAAA TCCCAAG GCTGCTA CTTGGGA GAAGTAACTGAGGGT Ava_1196 1472953 - 1474479 + | monooxygenase, FAD-binding Ava_1197 1477014 - 1474465 - | primosome assembly protein PriA TERM 1364 1476557 - 1476577 + g 70 -2.5 -4.91977 | opp_overlap 1476560, overlap 1476558 1476560 GCTGGGGGGCTTAAA AAAGCAACT GAT AGTTGCTCA TTTTGTCTTTTGATC TERM 1365 1476574 - 1476560 - G 100 -8.6 -5.00616 | opp_overlap 1476558 1476557 1476560 GGGGGGCTTAAAAAA GCAACT GAT AGTTGC TCATTTTGTCTTTTG TERM 1366 1477526 - 1477514 - H 70 -3.3 -4.92756 | opp_overlap 1477514 1477515, overlap 1477515 ATTATTAAAAATAAA GGGGA CTT TTCCC ATGTTTTTTTCTAAT TERM 1367 1477645 - 1477634 - H 70 -3 -5.19275 | ACTGAGAAAATAAAA TTTG GGTG CAAA ACTAAATATTTTCGA TERM 1368 1478551 - 1478541 - g 75 -2.4 -5.25805 | AACAAACTCAAAAAA GCCC AAC GGGA ACTCAAACAAAAATT Ava_1198 1477851 - 1478987 + | sigma 28 (flagella/sporulation) TERM 1369 1479384 - 1479397 + G 75 -3.1 -5.2189 | overlap 1479377 1479375 CCGCAGGTCAAGCCG TAGGG TTTG CCTTA TTTTTTCATAATTAC Ava_1199 1479185 - 1479679 + | GCN5-related N-acetyltransferase Ava_1200 1479934 - 1480269 + | cytochrome c6 TERM 1370 1480302 - 1480323 + T 100 -10.2 -4.91109 | opp_overlap 1480300 1480298 1480291 1480290 1480302 AAACTGACTAACAGA TAGCGGGA CAATAA TCCCGCTA TTTTTGTCATCAGAG TERM 1371 1480323 - 1480302 - T 80 -10.9 -3.14982 | opp_overlap 1480302, overlap 1480300 1480298 1480291 1480290 AAACTGACTAACAGA TAGCGGGAC AATA ATCCCGCTA TTTTTGTCATCAGAG Ava_1201 1481701 - 1480577 - | oxidoreductase-like TERM 1372 1480689 - 1480669 - G 71 -6.9 -4.18702 | ATAACTGGGAATAAA TACCTTCTT TTA AAGATGGTA CTACTGGCTTTTGCT Ava_1202 1482297 - 1482022 - | hypothetical protein Ava_1203 1483678 - 1482503 - | hypothetical protein TERM 1373 1482934 - 1482952 + g 71 -6.7 -4.14147 | TGGCAAACTCTTGTT GCACTGT CTGGC GCAGTGC TTGTTGTTCTTCTAT TERM 1374 1483595 - 1483615 + g 78 -5.3 -4.98857 | overlap 1483598 CTCCGCAGCTAGCCG CTTGCGCCA AAA TTGCGCTAG TTTTTCTGCTTCCGT Ava_1204 1484249 - 1485538 + | glutamate dehydrogenase (NADP) TERM 1375 1485777 - 1485734 - f 100 -16.2 -3.12749 | opp_overlap 1485737 1485737 1485739 1485766, overlap 1485736 1485739 TTAATAATGGCAACA CATCATCTGTAGAGACGCGA TTTA TCGCGTCTCTACAGATAGTT TATTTGTCGCCTTCT TERM 1376 1485775 - 1485736 - f 100 -18.8 -3.11727 | opp_overlap 1485737 1485737 1485739 1485766, overlap 1485734 1485739 AATAATGGCAACACA TCATCTGTAGAGACGCGA TTTA TCGCGTCTCTACAGATAG TTTATTTGTCGCCTT TERM 1377 1485737 - 1485775 + F 100 -19.9 -4.56969 | gap 1, opp_overlap 1485736 1485734 1485739, overlap 1485737 1485739 1485766 ATAATGGCAACACAT C-ATCTGTAGAGACGCGA TTTA TCGCGTCTCTACAGATAG TTTATTTGTCGCCTT TERM 1378 1485737 - 1485774 + F 100 -20.1 -3.33097 | opp_overlap 1485736 1485734 1485739, overlap 1485737 1485739 1485766 ATAATGGCAACACAT CATCTGTAGAGACGCGA TTTA TCGCGTCTCTACAGATA GTTTATTTGTCGCCT TERM 1379 1485739 - 1485772 + F 100 -22.7 -3.22499 | opp_overlap 1485736 1485734 1485739, overlap 1485737 1485737 1485766 AATGGCAACACATCA TCTGTAGAGACGCGA TTTA TCGCGTCTCTACAGA TAGTTTATTTGTCGC TERM 1380 1485772 - 1485739 - f 100 -22.7 -2.76093 | opp_overlap 1485739 1485737 1485737 1485766, overlap 1485736 1485734 AATGGCAACACATCA TCTGTAGAGACGCGA TTTA TCGCGTCTCTACAGA TAGTTTATTTGTCGC Ava_1205 1485865 - 1486935 + | hypothetical protein TERM 1381 1487001 - 1487031 + T 95 -10.6 -4.50859 | gap 1 CTCTCCTCAATTTTC GGTGCGTTA-GGA CTAATT TCCATAACGCACC TTTGTATTTTAATTA Ava_1206 1489017 - 1487044 - | acetyl-CoA synthetase TERM 1382 1487923 - 1487949 + g 74 -4.5 -4.75174 | gap 1, overlap 1487925 GCGAATTGCGGTGGG TGCGGTGTAGAA AATG TTC-ACGCCGTA TTTTTCAATTACATC TERM 1383 1488256 - 1488267 + g 85 -7.2 -4.88736 | TTCGGCGGGACAGTC GGCG GATG CGCC TTTTTGTAAATCGTG TERM 1384 1489236 - 1489294 + H 78 -11.3 -2.6836 | gap 2 AGGGCTGTGTTAGTA GGGTGCGTCAGTAT-GAATAATTTCG-TG GTA CAGCTAAATTTTCCCGTACTGACGCACCC TACATTTGGATATTT TERM 1385 1489978 - 1489966 - g 70 -7.7 -3.60364 | overlap 1489964 CCCAGAAGAACAACA GGCAA AAT TTGCC CAGATGACTGCTAAT Ava_1207 1489721 - 1490431 + | hypothetical protein Ava_1208 1490503 - 1490955 + | hypothetical protein Ava_1209 1491406 - 1490969 - | hypothetical protein TERM 1386 1491565 - 1491543 - R 72 -9.2 -2.69151 | opp_overlap 1491543 TCTTCTCATAGAGTA CCTCTCTCCT TGT AGAAAAGAGG CTTTAAGGTTTTAGG TERM 1387 1491714 - 1491724 + r 88 -5.4 -5.4505 | CATCTTTCCGGATTT TCTC TAG GAGA TTTTTTCTTCAGCAC Ava_1210 1494873 - 1491763 - | multi-sensor Signal transduction histidine kinase TERM 1388 1491878 - 1491894 + g 72 -6.5 -4.35042 | opp_overlap 1491877, overlap 1491875 ATAGACAAACCTAAG CCAGTAC CTT GTCCTGG TTCTTTTGTAGTAAA TERM 1389 1494107 - 1494076 - G 70 -6 -4.35646 | AGATTCAAAGACAAA TTCACCACTCCAAT CTGG ATTGAAGCGATAAA TAGCTACGCGGTCAG TERM 1390 1495133 - 1495103 - R 88 -7.6 -4.84761 | overlap 1495107 ACAGGGCCATAAAAA TTTAGGGACACGAT ATA ATCATGTCCCTGGA AGAAGATTTTTGTAA TERM 1391 1495129 - 1495107 - R 86 -12.8 -2.88667 | overlap 1495103 GGCCATAAAAATTTA GGGACACGAT ATA ATCATGTCCC TGGAAGAAGATTTTT Ava_1211 1495337 - 1495176 - | hypothetical protein petN 1495434 - 1495345 - | cytochrome b6f complex subunit PetN Ava_1212 1495571 - 1496032 + | hypothetical protein Ava_1213 1496590 - 1496060 - | MgtC/SapB transporter TERM 1392 1497459 - 1497449 - g 71 -6.8 -4.11371 | GAATATGCTTTAAAA CCCA TAT TGGG TGAACTAGGAGCCAG Ava_1214 1497080 - 1497646 + | NADPH-dependent FMN reductase TERM 1393 1497887 - 1497923 + F 91 -11.8 -3.92625 | opp_overlap 1497895, overlap 1497885 1497895 TCCTAACCTCTGCTA GTAGTAAATAGTGGGA TTTAC TCCTACTATTTTCTAC TTTACTTAAAATATC TERM 1394 1497895 - 1497915 + F 76 -6.2 -4.64076 | opp_overlap 1497895, overlap 1497885 1497887 TCTGCTAGTAGTAAA TAGTGGGA TTTAC TCCTACTA TTTTCTACTTTACTT Ava_1215 1498050 - 1498379 + | hypothetical protein Ava_1216 1499092 - 1498400 - | hypothetical protein TERM 1395 1499307 - 1499317 + G 73 -5.4 -4.74504 | ATTGAGTATTCGTGG CTGA CTG TCAG TTTTTGGATTGCCGT TERM 1396 1501550 - 1501571 + G 70 -8.1 -3.65353 | GGGTGCAATGCTGGC GTTACTCTT TACC AAGAGTGAC TTTGGCATGATTTCC Ava_1217 1499232 - 1501931 + | acriflavin resistance protein Ava_1218 1501931 - 1502914 + | 3-beta hydroxysteroid dehydrogenase/isomerase Ava_1219 1503002 - 1504018 + | radical SAM family protein TERM 1397 1504093 - 1504147 + F 84 -10.1 -3.81755 | opp_overlap 1504118 AAAATCCAAGTATCT GTAGGGTGGGCAATGCCCACC AAAACCATGACAC GGTTGGCAATGCCTACTCTAC TTATATTTCAGAAAT Ava_1220 1504211 - 1504585 + | hypothetical protein TERM 1398 1504724 - 1504712 - f 72 -4.1 -5.02074 | TTATTTCCCAAAAAA TTCGC TTG GCAAA AATCGGCATGAGTGA TERM 1399 1504806 - 1504827 + G 73 -5.1 -4.72986 | overlap 1504808 ATCGTTTTTGGTTAT TTTCCTGGT TTCT ACCTGGAGA TTTTTGCTGGCACTA TERM 1400 1505185 - 1505152 - g 80 -11.7 -2.73364 | overlap 1505161 TTGGCATCTCAACCA GTGACGACAGAAGCG CGAT CGCTCCTAGCGCCAC CGCCACCACCAGAAC Ava_1221 1504732 - 1505475 + | hypothetical protein Ava_1222 1506683 - 1505553 - | dihydroorotate dehydrogenase 2 TERM 1401 1508468 - 1508452 - g 70 -9.5 -2.81584 | overlap 1508451 AGAGTATCCAAGAAT GTCTACA GAT TGTAGAC GGAACTGAGAGCGAA Ava_1223 1506822 - 1509713 + | ATP-binding region, ATPase-like Ava_1224 1509979 - 1510314 + | hypothetical protein Ava_1225 1510345 - 1510647 + | PadR family transcriptional regulator Ava_1226 1511966 - 1510707 - | 2-octaprenyl-6-methoxyphenyl hydroxylase Ava_1227 1512312 - 1513124 + | hypothetical protein Ava_1228 1513937 - 1513179 - | hypothetical protein Ava_1229 1514019 - 1515404 + | extracellular solute-binding protein TERM 1402 1515636 - 1515618 - f 75 -10.2 -2.77416 | overlap 1515615 ATTAGGAAGACAGTA GGGTGGGC ATT GCCCACCA TGTAAATGCTTGGCT Ava_1230 1515855 - 1516721 + | polysaccharide deacetylase Ava_1231 1517700 - 1516831 - | TetR family transcriptional regulator Ava_1232 1517885 - 1519219 + | heterocyst specific ABC-transporter, membrane fusion protein DevB Ava_1233 1519263 - 1520441 + | DevC protein Ava_1234 1520450 - 1521163 + | ABC transporter-like TERM 1403 1521197 - 1521161 - T 91 -11.8 -4.16842 | gap 1, opp_overlap 1521172, overlap 1521164 GTGAGTGTCAATAAA TGA-TGTAGAGACGTTG CATA CAACGTCTCTACAGTCC AGAATAAAGCACATC TERM 1404 1521193 - 1521164 - T 100 -18.1 -3.10512 | opp_overlap 1521172, overlap 1521161 AGTGTCAATAAATGA TGTAGAGACGTTG CATA CAACGTCTCTACA GTCCAGAATAAAGCA Ava_1235 1521972 - 1521217 - | creatininase Ava_1236 1523529 - 1521997 - | retinal pigment epithelial membrane protein Ava_1237 1525039 - 1523621 - | biopterin transport-related protein BT1 TERM 1405 1524266 - 1524254 - G 79 -3.3 -5.30348 | overlap 1524255 ACTGAAGAAGAAAAA GGCTG AGT CAGCA GTTGGGGTGGCTTGC Ava_1238 1526411 - 1525179 - | 3-oxoacyl-(acyl carrier protein) synthase II Ava_1239 1527045 - 1526512 - | GCN5-related N-acetyltransferase Ava_1240 1527932 - 1527144 - | peptidyl-prolyl cis-trans isomerase, cyclophilin type TERM 1406 1528112 - 1528140 + r 79 -10.4 -3.19449 | opp_overlap 1528112, overlap 1528104 1528102 GGATTTAGGAGGACA GGGGGAAAACTT TCTCT AACTTTTCCCCC TTGCTCCCCTGTTTC TERM 1407 1528140 - 1528112 - R 77 -10.4 -2.83164 | opp_overlap 1528112 1528104 1528102 GGATTTAGGAGGACA GGGGGAAAACTT TCTCT AACTTTTCCCCC TTGCTCCCCTGTTTC Ava_1241 1528800 - 1528204 - | photosystem I assembly protein Ycf4 TERM 1408 1528763 - 1528773 + g 74 -6.8 -4.4078 | GAACTGTCACCGTTA GGTG AAT CACC TTTGTTAATTGTTGT Ava_1242 1529297 - 1530352 + | photosystem II reaction centre protein PsbD/D2 TERM 1409 1530943 - 1530958 + G 71 -9 -3.29013 | opp_overlap 1530940 ATTTGCTTAAATCTC CCTTCG GTGG CGAAGG TTGGATTGTTAGCGT TERM 1410 1531256 - 1531279 + G 71 -9 -3.28712 | gap 1, opp_overlap 1531260, overlap 1531260 CTTCTTGGTTCGTGA CCAACGCTTAG GTG CTAA-CGTTGG TTCTGCCCAAGGCCC Ava_1243 1530336 - 1531715 + | photosynthetic II protein PsbC TERM 1411 1531759 - 1531780 + T 100 -8.8 -5.96521 | opp_overlap 1531750, overlap 1531750 TCAAACGCTTTTTAA GCTCTTGT GTAATA ACAAGAGC TTTTTTTTAATTCCT TERM 1412 1531888 - 1531856 - T 78 -9.1 -3.80733 | opp_overlap 1531872, overlap 1531860 1531863 1531883 TCGATTTCAGAAGAA CCAAGACTTGGGGGA TTC TCCCCCAAACCCCCG ATTGGGGGACGGTTG TERM 1413 1531884 - 1531860 - T 95 -12.9 -3.58208 | opp_overlap 1531872, overlap 1531856 1531863 1531883 TTTCAGAAGAACCAA GACTTGGGGGA TTC TCCCCCAAACC CCCGATTGGGGGACG TERM 1414 1531881 - 1531863 - T 88 -13.2 -2.61042 | opp_overlap 1531872, overlap 1531860 1531856 CAGAAGAACCAAGAC TTGGGGGA TTC TCCCCCAA ACCCCCGATTGGGGG TERM 1415 1531896 - 1531883 - T 78 -9.5 -3.53444 | opp_overlap 1531872, overlap 1531860 1531856 GGATTCTCCCCCAAA CCCCC GATT GGGGG ACGGTTGCGTCCCCC Ava_1244 1532763 - 1532194 - | hypothetical protein TERM 1416 1532404 - 1532427 + g 74 -6.7 -4.28762 | GATGGATACTGTTCT GGTGTGACG ATTATC CGTCGCATC TTTTAATCCAATTCT TERM 1417 1532897 - 1532883 - H 76 -5.8 -4.68994 | ATTATTACTTAAAAA TACAAA TGA TTTGTA AAAGATAATTGATAT Ava_1245 1532973 - 1533464 + | hypothetical protein TERM 1418 1533751 - 1533720 - T 100 -16 -2.63555 | opp_overlap 1533720, overlap 1533716 1533725 TAGTCATATAATTTA TTGAAGGCTGACGG TTAA CTGTCAGCCTTCAA TTGTTAAAAATACTG TERM 1419 1533720 - 1533751 + T 100 -18.2 -3.63991 | opp_overlap 1533720 1533716 1533725 TAGTCATATAATTTA TTGAAGGCTGACGG TTAA CTGTCAGCCTTCAA TTGTTAAAAATACTG TERM 1420 1533746 - 1533725 - T 76 -10.1 -3.11173 | opp_overlap 1533720, overlap 1533720 1533716 ATATAATTTATTGAA GGCTGACGG TTAA CTGTCAGCC TTCAATTGTTAAAAA Ava_1246 1535281 - 1533755 - | peptidoglycan binding domain-containing protein TERM 1421 1535194 - 1535177 - G 74 -6.3 -4.4891 | opp_overlap 1535177 1535178, overlap 1535178 TGCACTACTAGAAAA CTTTGGC CATT GCCAAAA TTTTAGATTAACTTT Ava_1247 1536389 - 1535910 - | hypothetical protein Ava_1248 1538026 - 1536515 - | AAA ATPase, central region TERM 1422 1537258 - 1537245 - G 70 -5.2 -4.48713 | opp_overlap 1537254 CCTACTAATAATAAA CCCC GTGGGT GGGG TAATCCATATTGGCG Ava_1249 1538866 - 1538210 - | hypothetical protein TERM 1423 1539247 - 1539219 - R 100 -14.1 -2.7728 | overlap 1539210 TGTAAATGCGAAGCA TCTCTGTAGTTAA TTT TTAACCACAGAGA TGCAAAAGTAAAATA Ava_1250 1540737 - 1539274 - | hypothetical protein TERM 1424 1540651 - 1540620 - G 73 -3.7 -4.96106 | opp_overlap 1540620, overlap 1540622 GATAAATACCAAAAA TCTGCCCCGGA TTAATGAATT TCCGAGGCATA GCTGCAATAATTCGC Ava_1251 1542713 - 1540740 - | hypothetical protein TERM 1425 1541714 - 1541731 + g 70 -7.7 -3.62291 | overlap 1541712 TTGAAACTCTATTTG GCGTACC ACCC GGTATGC TGTTTATACTATTAG TERM 1426 1542071 - 1542054 - G 71 -8.5 -3.56273 | opp_overlap 1542051 1542054 CTCATCACCAGACAA CCATTTG ATTG CAAATGG TGATTTAGTTTCTGA TERM 1427 1542150 - 1542171 + g 89 -6.7 -5.30348 | TGTTGTCAGAACTGG TTTGATGAG CGCG TTCATCAAA TTTTTGTTATTCGCT Ava_1252 1543428 - 1542763 - | hypothetical protein Ava_1253 1543851 - 1544108 + | hypothetical protein Ava_1254 1544792 - 1544151 - | pentapeptide repeat-containing protein TERM 1428 1544474 - 1544461 - G 71 -2.3 -5.08824 | GCGCCACTCAAAAAA GCCCC AGCC AAGGC TACACCACTGAGTCT Ava_1255 1546183 - 1544789 - | sensor protein Ava_1256 1546364 - 1547587 + | hypothetical protein Ava_1257 1548128 - 1547727 - | hypothetical protein TERM 1429 1548262 - 1548282 + r 80 -11.1 -3.18912 | TTTGAATTCCCCATA CCCCTTCCC GCA GGGAAAGGG TTGATACCTGAATAC TERM 1430 1548397 - 1548339 - R 100 -16.3 -2.72855 | gap 2, opp_overlap 1548336 1548342 1548367, overlap 1548369 GAAATGCTCTAAGTA TCTGTAGGGTGGGCAATGCCCACCATA TGATGAT TGTGGTGGGCATTGCCCACCCTACT-- TATATTTCAAAAATC TERM 1431 1548342 - 1548396 + r 100 -34 -3.81755 | opp_overlap 1548339 1548369, overlap 1548336 1548367 ATGCTCTAAGTATCT GTAGGGTGGGCAATGCCCACCATA TGATGAT TGTGGTGGGCATTGCCCACCCTAC TTATATTTCAAAAAT Ava_1258 1550018 - 1548429 - | radical SAM family protein Ava_1259 1550514 - 1550912 + | hypothetical protein TERM 1432 1550962 - 1550935 - f 81 -11.4 -2.64322 | opp_overlap 1550940, overlap 1550940 ATTTTAGTCAAATAT TAAAAGCTGCTG AATT CAGCAGCTTTTT TGTTTGGTTAATTGT TERM 1433 1550957 - 1550940 - f 95 -11.3 -4.50358 | opp_overlap 1550940, overlap 1550935 AGTCAAATATTAAAA GCTGCTG AATT CAGCAGC TTTTTTGTTTGGTTA TERM 1434 1550940 - 1550957 + F 100 -11.3 -5.72053 | opp_overlap 1550940 1550935 AGTCAAATATTAAAA GCTGCTG AATT CAGCAGC TTTTTTGTTTGGTTA Ava_1260 1551132 - 1551593 + | hypothetical protein Ava_1261 1551677 - 1552231 + | hypothetical protein Ava_1262 1552309 - 1553064 + | ABC transporter-like Ava_1263 1553915 - 1553145 - | two component transcriptional regulator Ava_1264 1554452 - 1554694 + | hypothetical protein Ava_1265 1555695 - 1555258 - | hypothetical protein TERM 1435 1555806 - 1555820 + H 73 -5.8 -4.45083 | AGCGGCGGGATACGC CTATTA CCG TAATAG TTTTGTAAATATACC Ava_1266 1555949 - 1557322 + | xenobiotic compound monooxygenase A subunit TERM 1436 1557366 - 1557391 + T 90 -4 -5.95539 | opp_overlap 1557366 CCACTCATAAAAAAA CAACCCTCTT CATTTA GAGAAGGTTG TTTTTTTGTTTGCAA TERM 1437 1557391 - 1557366 - T 88 -5.5 -5.64274 | opp_overlap 1557366 CCACTCATAAAAAAA CAACCCTCT TCATTTAG AGAAGGTTG TTTTTTTGTTTGCAA TERM 1438 1557443 - 1557430 - T 70 -8.1 -3.39327 | GCGGGAGATTCAGAA TGGCG CGAT CGCCA AACAGATAACAGCTA mraY 1558527 - 1557424 - | phospho-N-acetylmuramoyl-pentapeptide-transferase TERM 1439 1558066 - 1558039 - G 82 -5.7 -5.04733 | gap 1 TAACCATAAACAAAA GGCTGCTGCAAA ACAGA TTTGCAA-AGCC AATTTCATCCGTGGG TERM 1440 1558403 - 1558379 - G 72 -10.1 -2.87529 | opp_overlap 1558397, overlap 1558378 GTACATAGCAACAAG GGCAAGGTA AGCGATG TACCTTGCC AGGGATTTCTGTTTG Ava_1268 1558842 - 1558606 - | hypothetical protein Ava_1269 1559086 - 1559670 + | PAP fibrillin Ava_1270 1559979 - 1560194 + | photosystem I reaction center subunit IV Ava_1271 1560432 - 1561265 + | formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase Ava_1272 1561395 - 1561607 + | hypothetical protein Ava_1273 1561765 - 1562739 + | malate dehydrogenase (NAD) Ava_1274 1563672 - 1562842 - | abortive infection protein TERM 1441 1563650 - 1563617 - G 70 -3.9 -4.81863 | overlap 1563619 AAAGCGAGAATAAAA TAGCCCAGCCT AATTGGGGCTGG ACGCTGGGCTA AAAAAGCAAGTCTGT TERM 1442 1563641 - 1563619 - G 77 -8.4 -4.01115 | overlap 1563617 AGCGAGAATAAAATA GCCCAGCC TAATTGG GGCTGGAC GCTGGGCTAAAAAAG clpS 1564073 - 1563792 - | ATP-dependent Clp protease adaptor protein ClpS Ava_1276 1564334 - 1564702 + | hypothetical protein Ava_1277 1565904 - 1564732 - | aspartate aminotransferase TERM 1443 1565057 - 1565070 + g 91 -8.1 -4.788 | TCATCGGTGTTGTAA GCTGC GATC GCAGC TTTTTGAATTGCTTT TERM 1444 1565363 - 1565347 - G 71 -3 -5.03145 | TAATTCCTCAAAAAA CTCTAG TGTTG CTAAAG CCCCAGTAGGGTTGT Ava_1278 1566328 - 1566122 - | hypothetical protein Ava_1279 1566802 - 1567140 + | anti-sigma-factor antagonist domain-containing protein TERM 1445 1568474 - 1568456 - g 100 -8.8 -4.62302 | TAAGAGGTGTAAAAA CAGCCTGG GAA CAAGGCTG GGATAAAATCAAGTT Ava_1280 1567291 - 1569930 + | radical SAM family protein TERM 1446 1570275 - 1570292 + F 73 -5.6 -4.56702 | opp_overlap 1570275 GTATCACATCAGAAA TCAACC ACGGAC GGTTGA TTTATTTGCTTAGAC Ava_1281 1570487 - 1572550 + | ribonuclease E and G TERM 1447 1573211 - 1573198 - g 73 -3.8 -5.00884 | ACGGTCTGTAAAAAA GCTG AAATTA CAGC CCATACTCTGTTTGG Ava_1282 1572821 - 1573498 + | RNase HII Ava_1283 1574164 - 1573577 - | hypothetical protein TERM 1448 1573787 - 1573767 - G 71 -6.8 -4.12532 | opp_overlap 1573766, overlap 1573770 GGTGTTAGAGAGAAA GGAGGTGG TAAAT CCACCTGC ACTTGTAAATCAGCC Ava_1284 1574588 - 1575475 + | prephenate dehydratase Ava_1285 1576166 - 1575516 - | peptidase S16, lon TERM 1449 1575590 - 1575616 + g 72 -9.4 -3.16217 | opp_overlap 1575588, overlap 1575588 1575613 TGGTAGTTAAAATTT CTGCTTCTCGTT CTA GGCGAGCAGCAG TATCTTGCATTTCCA TERM 1450 1576289 - 1576264 - R 100 -12 -4.86731 | TCTGGCTAAATAAAA TGCCCTGAAA AAATTA TTTCAGGGCA GCATAAATATTTTTA rpsJ 1576685 - 1576368 - | 30S ribosomal protein S10 TERM 1451 1576832 - 1576868 + r 72 -8 -3.65046 | opp_overlap 1576836, overlap 1576836 TATTTAAGTTCAGAT AAAAGAGCAGAGATGC CGCAA GCTTCTCTGCTCTTAG TTATTAGGGTGAAAA TERM 1452 1576864 - 1576836 - R 100 -13.9 -4.55118 | opp_overlap 1576832 1576836 TAAGTTCAGATAAAA GAGCAGAGATGCC GCA AGCTTCTCTGCTC TTAGTTATTAGGGTG TERM 1453 1576836 - 1576864 + r 100 -13.2 -3.54158 | opp_overlap 1576836, overlap 1576832 TAAGTTCAGATAAAA GAGCAGAGATGC CGCAA GCTTCTCTGCTC TTAGTTATTAGGGTG tuf 1578117 - 1576888 - | elongation factor Tu Ava_1288 1580218 - 1578140 - | elongation factor G TERM 1454 1579164 - 1579180 + g 84 -2.9 -5.66229 | overlap 1579167 GCTTTCATGAGAACT AAACGGG AAA TCCGTTC TTTTTTGTTCTTAGT TERM 1455 1579167 - 1579177 + g 74 -4.6 -4.86954 | overlap 1579164 TTCATGAGAACTAAA CGGG AAA TCCG TTCTTTTTTGTTCTT Ava_1289 1580829 - 1580359 - | 30S ribosomal protein S7 TERM 1456 1580582 - 1580601 + g 73 -5.6 -4.51174 | gap 1, overlap 1580585 GGTACTTGGTAGGTT GCACCACCG ACA CGGCGG-GC TTTTACTTCTACTAA rpsL 1581700 - 1581317 - | 30S ribosomal protein S12 Ava_1291 1582136 - 1581798 - | HesB/YadR/YfhF Ava_1292 1583035 - 1582613 - | mannose-6-phosphate isomerase type II Ava_1293 1585296 - 1583314 - | hypothetical protein TERM 1457 1589030 - 1589048 + G 74 -9.6 -3.34398 | overlap 1589028 AGTCGCATCAGGACG CTTTGGTG TTA CACCAGAG TATTTAGCCAGCGCC Ava_1294 1586052 - 1590740 + | glutamate synthase (ferredoxin) TERM 1458 1590828 - 1590862 + T 75 -9.5 -3.11988 | gap 1, overlap 1590827 1590831 ATGTGCTTTACTCTG GACTGTAGAGACGTTG CATG CAAAGTCTCTACA-TC ATTTATTGGGTGGAA TERM 1459 1590831 - 1590860 + T 87 -12.3 -3.11702 | overlap 1590828 1590827 TGCTTTACTCTGGAC TGTAGAGACGTTG CATG CAAAGTCTCTACA TCATTTATTGGGTGG TERM 1460 1590949 - 1590966 + T 70 -5.6 -4.51196 | overlap 1590963 TAAATTTTGTTGGCG TAGCCT TGCCGT AGGCTA TTTTGTAGCTTTAGC TERM 1461 1591145 - 1591118 - T 91 -11.4 -3.68908 | opp_overlap 1591123, overlap 1591123 AAATATTTATTTAAA CAAAAGACGCGA GATA TCGCGTCTTTTT TCATGACGAATTACT TERM 1462 1591123 - 1591140 + T 100 -11.3 -5.14563 | opp_overlap 1591118 1591123 TTTATTTAAACAAAA GACGCGA GATA TCGCGTC TTTTTTCATGACGAA TERM 1463 1591140 - 1591123 - T 100 -11.3 -4.90778 | opp_overlap 1591123, overlap 1591118 TTTATTTAAACAAAA GACGCGA GATA TCGCGTC TTTTTTCATGACGAA Ava_1295 1592073 - 1591156 - | polysaccharide deacetylase TERM 1464 1594864 - 1594830 - g 78 -4.4 -5.22258 | opp_overlap 1594836 GAAACTAAAAGAAAA TTGAAATCTTTAGTGG AAT CTTCTAAAGATTTAAA ATTACAGGATGAGTG TERM 1465 1595626 - 1595639 + G 74 -4.5 -4.84602 | AAAATCCCTATGTGT GGCTG TATC TAGCC TTTGTTTATTTGTAT Ava_1296 1593348 - 1595783 + | hypothetical protein TERM 1466 1595864 - 1595874 + G 73 -5.4 -4.68424 | TTGCTGCTTTGGCTT TGTG GCT CACA TTTTTAGGTAACTTA Ava_1297 1595806 - 1597353 + | glycosyl transferase family protein Ava_1298 1598610 - 1597414 - | hypothetical protein Ava_1299 1600115 - 1598811 - | hypothetical protein TERM 1467 1598903 - 1598887 - G 75 -5.2 -4.81863 | AAACCTAGAACAAAA TATCCT TGACG AGGATA GCGAGATAACAGCAC TERM 1468 1600450 - 1600440 - H 70 -8.2 -3.41602 | GGTACTCTACGAGAA GCGC TCC GCGC TATGGAGAGAGGTTT Ava_1300 1600648 - 1601844 + | 1-deoxy-D-xylulose 5-phosphate reductoisomerase Ava_1301 1602323 - 1602520 + | hypothetical protein Ava_1302 1602830 - 1602570 - | thiamineS TERM 1469 1604283 - 1604312 + G 72 -7.3 -4.01137 | opp_overlap 1604289, overlap 1604284 1604289 1604308 GGACTTTACTCCTGG CTAAAATTTTGGC TGGT GCCGAAATTTTAC TTTGTAGATTATGTC TERM 1470 1604284 - 1604311 + G 79 -10.8 -2.99959 | opp_overlap 1604289, overlap 1604283 1604289 1604308 GACTTTACTCCTGGC TAAAATTTTGGC TGGT GCCGAAATTTTA CTTTGTAGATTATGT TERM 1471 1604289 - 1604306 + G 77 -6.3 -4.62475 | opp_overlap 1604289, overlap 1604284 1604283 TACTCCTGGCTAAAA TTTTGGC TGGT GCCGAAA TTTTACTTTGTAGAT Ava_1303 1603011 - 1604342 + | Rieske (2Fe-2S) region Ava_1304 1605130 - 1604507 - | heat shock protein DnaJ-like clpP 1605953 - 1605360 - | ATP-dependent Clp protease proteolytic subunit Ava_1306 1606694 - 1606032 - | ATP-dependent Clp protease-like protein TERM 1472 1607356 - 1607346 - g 78 -4 -5.09426 | GCCAAGGGGAAAAAA GAAA CGA TTTC TCAAGCTTTTTTGTT Ava_1307 1606944 - 1608200 + | von Willebrand factor, type A Ava_1308 1608197 - 1609480 + | von Willebrand factor, type A Ava_1309 1609485 - 1609871 + | glyoxalase/bleomycin resistance protein/dioxygenase Ava_1310 1609861 - 1610181 + | hypothetical protein Ava_1311 1610162 - 1610443 + | plasmid stabilization system protein Ava_1312 1611032 - 1610448 - | hypothetical protein Ava_1313 1611639 - 1611025 - | heat shock protein DnaJ-like TERM 1473 1611498 - 1611509 + g 78 -4.4 -5.15117 | TGATGCGTTCTTCTG GCTT CATC AAGC TTTTTTGCGCTTTTG Ava_1314 1614382 - 1611653 - | peptidase M, neutral zinc metallopeptidase, zinc-binding site TERM 1474 1612216 - 1612228 + g 71 -4.1 -4.89009 | GTTTAATTCTCTCTA GTTCT TTA AGAGC TTTTTGCTTAGATAT Ava_1315 1614828 - 1614382 - | peptidoglycan-binding LysM Ava_1316 1617038 - 1614825 - | heat shock protein Hsp70 Ava_1317 1617657 - 1617235 - | hypothetical protein Ava_1318 1618365 - 1617874 - | hypothetical protein Ava_1319 1618504 - 1619064 + | RDD rpmG 1619109 - 1619303 + | 50S ribosomal protein L33 rpsR 1619306 - 1619521 + | 30S ribosomal protein S18 TERM 1475 1619567 - 1619590 + F 74 -8.3 -3.70149 | GGATAAACGGAAGTG GCTACATAA ACAGTG TTATGTAGC TTTAAATCGTCTGAG TERM 1476 1620581 - 1620565 - g 71 -9.5 -2.94354 | CGACAGACTTAGACA CAAATCG CCT CGATTTG ACTCACCTGAAGGTC TERM 1477 1620672 - 1620654 - g 73 -5.2 -4.58395 | overlap 1620655 TTGAGTTGGGAAAAA CTCCCCGA TAG CCGGGAAA GATTGTGGGTGCATA TERM 1478 1621110 - 1621091 - g 74 -5 -4.82855 | opp_overlap 1621091 1621084, overlap 1621084 1621094 GATTAAAGTCAAAAA TGACGATA TCAG TATCGACA TTTTAGATGATTCCC Ava_1322 1619736 - 1621796 + | ribonuclease II TERM 1479 1621971 - 1621954 - T 84 -11.3 -3.61398 | opp_overlap 1621941 1621956 TCGTTGGGTGAAGAA GACGCGA TTCA TCGCGTC TCTACAAACAAATGG TERM 1480 1622117 - 1622145 + T 88 -7.5 -4.79451 | opp_overlap 1622117 1622115, overlap 1622144 AACACCTGGTAAATA TAGAGGCTGAAAT GTT ATTCAAGCCTCTA TTTTATATTTAAAAT TERM 1481 1622145 - 1622117 - T 78 -9.7 -3.36341 | opp_overlap 1622117 1622144, overlap 1622115 AACACCTGGTAAATA TAGAGGCTGAAAT GTT ATTCAAGCCTCTA TTTTATATTTAAAAT TERM 1482 1622308 - 1622328 + T 95 -7.6 -5.4251 | CACAGCAATTATCGA GGTTTGGT GTTGA ACCAAGCC TTTTTTGTATGTAAA TERM 1483 1622476 - 1622458 - T 89 -11 -4.12532 | opp_overlap 1622458 CTTGGTATACATAAA GGCTTGGC CCG ACCAAGCC TTTTTTGTTGGTTAT TERM 1484 1622458 - 1622476 + T 100 -10.3 -5.57396 | opp_overlap 1622458 CTTGGTATACATAAA GGCTTGG CCCGA CCAAGCC TTTTTTGTTGGTTAT Ava_1323 1625309 - 1623402 - | hypothetical protein TERM 1485 1623937 - 1623951 + g 72 -6.4 -4.36914 | opp_overlap 1623937, overlap 1623930 ACAACATCCACTACA GCTAGT GTT ACTGGC TTTTCTAGACCAAAA TERM 1486 1624811 - 1624826 + g 81 -4 -5.32608 | GAAAAAGTGAAGATT TCTGTA ACTT TGCAGA TTTTTTAGCTTTTTT TERM 1487 1624843 - 1624854 + g 71 -2.2 -5.22006 | TTTTTAGCTTTTTTG CTCT TTCT AGGG TTTTTATTCTGGTCG Ava_1324 1625764 - 1625462 - | hypothetical protein TERM 1488 1627864 - 1627842 - g 88 -9.8 -4.14627 | opp_overlap 1627847 1627853 1627854, overlap 1627854 GGTTCAGATAAAGAA CGCGATAGCG AAG CGCTACGGCG AAACGCCGAACGCAT TERM 1489 1627877 - 1627854 - g 79 -11 -3.13475 | gap 1, opp_overlap 1627854 1627853 1627847, overlap 1627842 GAACGCGATAGCGAA GCGCTACGGCG AAA CGCCG-AACGC ATTGATGTATTTCAT Ava_1325 1626204 - 1629452 + | SNF2-related helicase TERM 1490 1631830 - 1631818 - g 80 -4.8 -5.19212 | AGTATTAGTAAAAAA CTGC GGCAA GCAG ATAAACCTGTGAAAC Ava_1326 1629466 - 1633431 + | hypothetical protein TERM 1491 1633515 - 1633533 + F 82 -11.8 -2.78463 | opp_overlap 1633510, overlap 1633517 AGCGCACCAACCCGC CAGGGAAT GTA ATTCCCTG TCTAATAGCGAAAGT TERM 1492 1633517 - 1633531 + F 70 -8.6 -2.94099 | opp_overlap 1633510, overlap 1633515 CGCACCAACCCGCCA GGGAAT GTA ATTCCC TGTCTAATAGCGAAA TERM 1493 1633563 - 1633547 - f 88 -10.9 -3.76373 | TGTCTAATAGCGAAA GTCCTCT ATA AGAGGAC TGAGAAAATTAAGAA TERM 1494 1633656 - 1633638 - f 90 -13.2 -2.80935 | overlap 1633640 ACTTCAGCTATCAGA CAGGGGTT TTG AACCCCTG GCTGAGTAGGTGGTA TERM 1495 1633654 - 1633640 - f 76 -10 -2.95298 | overlap 1633638 TTCAGCTATCAGACA GGGGTT TTG AACCCC TGGCTGAGTAGGTGG TERM 1496 1633696 - 1633713 + F 76 -3.5 -5.31519 | AATCAAACAAATCCG GTATAAA TACA TTTATGC TTTTTCTTTAAATAT Ava_1327 1633768 - 1634172 + | transposase IS200 TERM 1497 1634222 - 1634200 - f 78 -10.6 -2.94354 | opp_overlap 1634202 1634204 CCAGATAGCCAGATA GTCAGGGATT GAA AATCCCTGTC TGATAGCTAAAGTCC TERM 1498 1634202 - 1634220 + F 82 -11.8 -2.80935 | opp_overlap 1634200, overlap 1634204 AGATAGCCAGATAGT CAGGGATT GAA AATCCCTG TCTGATAGCTAAAGT TERM 1499 1634204 - 1634218 + F 70 -8.6 -2.95298 | opp_overlap 1634200, overlap 1634202 ATAGCCAGATAGTCA GGGATT GAA AATCCC TGTCTGATAGCTAAA TERM 1500 1634250 - 1634234 - f 88 -10.9 -3.70902 | opp_overlap 1634234 1634242 TGTCTGATAGCTAAA GTCCTCT TCC AGAGGAC TGGTTAATTTAAGTA TERM 1501 1634234 - 1634250 + F 79 -10.9 -2.90283 | opp_overlap 1634234, overlap 1634242 TGTCTGATAGCTAAA GTCCTCT TCC AGAGGAC TGGTTAATTTAAGTA TERM 1502 1634930 - 1634919 - g 71 -3 -4.91712 | GCCAATCTACAAAAA CTAT TCCT ATAG CTGATAGCAACGGTT TERM 1503 1636249 - 1636284 + G 71 -4 -4.87592 | gap 1, opp_overlap 1636261, overlap 1636252 1636253 TCCTTTACCAATAGT CACCGTAGACGAGCC ACTATAC GGC-CGTCTACCTTG TTTTATTATCTCTAC Ava_1328 1634348 - 1637827 + | helicase-like TERM 1504 1638466 - 1638494 + G 73 -7.3 -4.17048 | overlap 1638463 1638493 GGTAAAGTCTTAGGC CCATGTCAGGGAC ATC GCCCTTGGCTTGG TTCTTTTGCCCAAGA Ava_1329 1637824 - 1639686 + | hypothetical protein TERM 1505 1639782 - 1639739 - f 70 -8.3 -3.38604 | gap 1, opp_overlap 1639753 1639775, overlap 1639744 1639752 TACTAAAACTAGCAA CAGCACTAGAAAACGGCAGG CTATC CCCGCC-TTTTCTAGTATCG ACTATTGCTAACTAC TERM 1506 1639777 - 1639744 - f 79 -11.2 -2.7961 | gap 1, opp_overlap 1639753 1639775, overlap 1639739 1639752 AAACTAGCAACAGCA CTAGAAAACGGCAGG CTATC CCCGCC-TTTTCTAG TATCGACTATTGCTA TERM 1507 1642437 - 1642425 - g 70 -7.7 -3.68265 | AAAGGCAACGCTAAA GTCCA GCC TGGAC AGGGAATAAAAGTCA Ava_1330 1640235 - 1642952 + | integrase catalytic subunit TERM 1508 1643947 - 1643915 - g 95 -12.9 -3.17688 | opp_overlap 1643914 1643917 GAACGACTGCATGAA CATACGCTCACACTA GCC CAATGTGAACGTATG GCTTTGGATACCACT Ava_1331 1642952 - 1644430 + | ATPase Ava_1332 1644521 - 1644937 + | hypothetical protein Ava_1333 1645481 - 1645077 - | hypothetical protein TERM 1509 1645235 - 1645248 + g 71 -6.7 -4.21737 | CTGGGATATTTTCAT CTCTG ATTC CAGAG TTTGATTGTTTTGAT Ava_1334 1646106 - 1645471 - | hypothetical protein TERM 1510 1645765 - 1645778 + g 70 -3.8 -4.74706 | CAAAGATGGAGTCAG TGGC AATCTC GCCA TTTTTAACTCTTGAA Ava_1335 1646343 - 1646990 + | phospholipase D/transphosphatidylase Ava_1336 1647294 - 1647034 - | hypothetical protein TERM 1511 1647482 - 1647449 - g 89 -7.4 -5.01422 | opp_overlap 1647449 GTAGACAAAAACAAA TGCGATCGCCCTCC GGGAAG AGACTGCGATCGCA TTTTGTACAACCCCA TERM 1512 1647449 - 1647482 + G 74 -6.7 -4.36914 | opp_overlap 1647449 GTAGACAAAAACAAA TGCGATCGCCCTC CGGGAAGA GACTGCGATCGCA TTTTGTACAACCCCA Ava_1337 1647431 - 1647817 + | hypothetical protein TERM 1513 1647838 - 1647860 + F 100 -8.5 -5.72622 | gap 1 TTTTTCCATCGCCTG GAGACGTGGT TCAT ACC-CGTCTC TTTTTTATTTATGAG Ava_1338 1648234 - 1649403 + | hypothetical protein Ava_1339 1649421 - 1650935 + | WD-40 repeat-containing protein Ava_1340 1651717 - 1651205 - | hypothetical protein Ava_1341 1652553 - 1651747 - | hypothetical protein Ava_1342 1654548 - 1652557 - | integrase catalytic subunit TERM 1514 1655247 - 1655269 + H 74 -4.2 -4.93333 | overlap 1655250 TAAATTTTTAATCTG TTTCTGAATT TGA GATTCAGTAA TTTTCTGTTTTAGTT Ava_1343 1655324 - 1657054 + | PAS/PAC sensor hybrid histidine kinase Ava_1344 1657146 - 1658189 + | adenosine deaminase Ava_1345 1659208 - 1658321 - | hypothetical protein Ava_1346 1659788 - 1659459 - | hypothetical protein TERM 1515 1659509 - 1659521 + g 72 -7.7 -3.79906 | GCTGGACTTTTTGAC CACCT AGC AGGTG TTGTTCTACCAATAG Ava_1347 1660986 - 1660012 - | cysteine synthase A Ava_1348 1661569 - 1661931 + | hypothetical protein TERM 1516 1661969 - 1661989 + F 73 -6.9 -4.09511 | overlap 1661959 AGGCTGTTAACTGTT GACTGTTGA TTG TTGACAGTC TTTTAAGAGGGTGTT TERM 1517 1662042 - 1662066 + F 80 -9.9 -3.53343 | opp_overlap 1662031 1662043, overlap 1662043 GAAACCCCTCTCCAA ACCTCTCCCCG AAA CGGAGAGAGGC TTTGAAACCCCCATT TERM 1518 1662065 - 1662043 - f 100 -15.6 -3.5394 | opp_overlap 1662043 1662042, overlap 1662031 AAACCCCTCTCCAAA CCTCTCCCCG AAA CGGAGAGAGG CTTTGAAACCCCCAT TERM 1519 1662043 - 1662065 + F 88 -13.4 -2.71791 | opp_overlap 1662031 1662043, overlap 1662042 AAACCCCTCTCCAAA CCTCTCCCCG AAA CGGAGAGAGG CTTTGAAACCCCCAT TERM 1520 1662100 - 1662074 - f 100 -16.6 -3.5525 | opp_overlap 1662074 AGAGAGGCTTTGAAA CCCCCATTCCCT CGC AGGGAAGGGGGG CTAGGGGGGTTAAGT TERM 1521 1662361 - 1662338 - f 71 -4.7 -4.55697 | ATTGTTACAAAGAAA TTCTACATA ACAAAA TATGCAGAA TGTAAGATGTGTCAG Ava_1349 1662583 - 1662897 + | hypothetical protein TERM 1522 1663396 - 1663383 - g 78 -2.4 -5.55695 | opp_overlap 1663383 GAACAAGAGAAAAAA TCAG CTTTTC CTGA TGTTGATTATGCAGT Ava_1350 1662921 - 1665002 + | dynamin TERM 1523 1665063 - 1665089 + F 74 -4.4 -4.96501 | GGCGCAGAGATGTAA GAGGGGAGGGGA GTT TTTTCTTCTCTC TTTATTTTTATGAAA TERM 1524 1666937 - 1666921 - g 71 -2.3 -5.16151 | CAAACTCAACAAAAA TCTTG GCAAAAA CAAGA ACGCATATATACTCG Ava_1351 1665202 - 1667427 + | heat shock protein DnaJ-like TERM 1525 1667451 - 1667475 + T 71 -4.2 -4.76193 | opp_overlap 1667454, overlap 1667452 1667454 GGGTTTAGGGGAAGG AAATACCGGG ATAGA CCCGGTATAA TTTTGTATTATGCTT TERM 1526 1667472 - 1667454 - T 88 -10.3 -3.91911 | opp_overlap 1667454 1667452 1667451 TTTAGGGGAAGGAAA TACCGGG ATAGA CCCGGTA TAATTTTGTATTATG TERM 1527 1667454 - 1667472 + T 79 -10.3 -3.27747 | opp_overlap 1667454, overlap 1667452 1667451 TTTAGGGGAAGGAAA TACCGGG ATAGA CCCGGTA TAATTTTGTATTATG Ava_1352 1669942 - 1667483 - | von Willebrand factor, type A TERM 1528 1670448 - 1670419 - g 100 -11 -4.44046 | opp_overlap 1670427 TGCATTTGAAATAAA TTTAGATAGAGA AGATTA TCTCTATCTAAA TGATGAGGATACTAA Ava_1353 1670036 - 1671274 + | hypothetical protein Ava_1354 1671823 - 1671335 - | hypothetical protein Ava_1355 1672065 - 1671820 - | hypothetical protein Ava_1356 1672162 - 1673640 + | NB-ARC Ava_1357 1674303 - 1673689 - | hypothetical protein TERM 1529 1674344 - 1674325 - R 100 -7.9 -5.88197 | opp_overlap 1674323 1674325 GTAAATACAAAAAAA CGCAAAG ATAAAG CTTTGCG TCTTGTAAACAAATT TERM 1530 1674375 - 1674392 + r 74 -8.5 -3.8211 | opp_overlap 1674374 1674372 1674371 GACTTAAAAATTTAT CTACTCA ATAT TGAGTAG TTATTCTCACTCGGC Ava_1358 1675051 - 1674413 - | 1-Cys peroxiredoxin TERM 1531 1676582 - 1676570 - g 71 -3.3 -5.0133 | opp_overlap 1676570 1676570 GAGGCTTCTAAAAAA CCATC TTT GGTGG TGGTTGTGGTGGATT Ava_1359 1675409 - 1677121 + | von Willebrand factor, type A Ava_1360 1677181 - 1677906 + | hypothetical protein Ava_1361 1677937 - 1679049 + | hypothetical protein Ava_1362 1680289 - 1679117 - | glycosyl transferase, group 1 Ava_1363 1680801 - 1680433 - | transposase IS4 Ava_1364 1681226 - 1680843 - | transposase Ava_1365 1682449 - 1681262 - | glycosyl transferase, group 1 Ava_1366 1683531 - 1682536 - | glycosyl transferase family protein TERM 1532 1683667 - 1683687 + r 85 -9.7 -3.95893 | opp_overlap 1683668, overlap 1683668 TTTCGATCCCCCTAA ATCCCCCTT AAA AAGGGGGAC TTTGATATGTGTTTT TERM 1533 1683668 - 1683686 + r 93 -13.2 -2.95909 | opp_overlap 1683668, overlap 1683667 TTCGATCCCCCTAAA TCCCCCTT AAA AAGGGGGA CTTTGATATGTGTTT TERM 1534 1683686 - 1683668 - R 100 -13.2 -3.54424 | opp_overlap 1683668 1683667 TTCGATCCCCCTAAA TCCCCCTT AAA AAGGGGGA CTTTGATATGTGTTT Ava_1367 1685437 - 1683776 - | hypothetical protein Ava_1368 1686943 - 1685603 - | FAD linked oxidase-like TERM 1535 1687044 - 1687030 - R 85 -11.4 -3.40403 | opp_overlap 1687015 TCTCCGTCAGGAGAA GGAGGG TTT CCCTCC GTAGAAAACTTTTCA TERM 1536 1687213 - 1687163 - R 90 -7.1 -5.10767 | gap 1, opp_overlap 1687171, overlap 1687164 TACTTAATATAAAAA CTTACGTAGCCTAACGCACC TTGTTATGTGGC GGTGCGTTAGGCT-CTTAAA ATATAATTCTGTTGT TERM 1537 1687212 - 1687164 - R 74 -8.4 -3.65375 | gap 1, opp_overlap 1687171, overlap 1687163 ACTTAATATAAAAAC TTACGTAGCCTAACGCACC TTGTTATGTGGC GGTGCGTTAGGCT-CTTAA AATATAATTCTGTTG TERM 1538 1687171 - 1687206 + r 85 -12 -3.08706 | opp_overlap 1687164 1687163 ATAAAAACTTACGTA GCCTAACGCACC TTGTTATGTGGC GGTGCGTTAGGC TCTTAAAATATAATT Ava_1369 1689141 - 1687414 - | flavin reductase-like, FMN-binding Ava_1370 1689707 - 1689210 - | hypothetical protein TERM 1539 1690018 - 1690050 + r 88 -11.3 -3.76952 | overlap 1690019 1690023 ACTCAGTTATAGATT TTCAGCCCCTTCCCT TGT AGGGAAGAGGTTGGG TTTAGGTTCCGTCGA TERM 1540 1690019 - 1690049 + r 86 -12.6 -2.8585 | overlap 1690018 1690023 CTCAGTTATAGATTT TCAGCCCCTTCCCT TGT AGGGAAGAGGTTGG GTTTAGGTTCCGTCG TERM 1541 1690023 - 1690045 + r 89 -12 -3.30781 | overlap 1690019 1690018 GTTATAGATTTTCAG CCCCTTCCCT TGT AGGGAAGAGG TTGGGTTTAGGTTCC Ava_1371 1691808 - 1690078 - | flavin reductase-like, FMN-binding Ava_1372 1692017 - 1692940 + | 1-aminocyclopropane-1-carboxylate deaminase TERM 1542 1693243 - 1693207 - g 71 -8.2 -3.54382 | gap 1, opp_overlap 1693204, overlap 1693203 GGCAATAAATACGAA TTTTCCGTT-GCAGCAA TTAG CTGCTGCCAAAGGAAAA CGCTATGGTGCAGCA TERM 1543 1693738 - 1693755 + G 88 -9.9 -4.1711 | opp_overlap 1693733 CTCCATTGAAGGTGA TACCTGG AAAT CCAGGTA TTTCTTAAAAATGAT TERM 1544 1693846 - 1693864 + G 72 -6.1 -4.38843 | opp_overlap 1693846 GTTTTCTACCAATTA TCCTTTT GATGA AAAAGGA TTTGTTGGTGTTTTA Ava_1373 1693076 - 1694224 + | glycoside hydrolase family protein TERM 1545 1694397 - 1694370 - T 93 -12.8 -3.36671 | opp_overlap 1694370 1694369 ACCCCAATTTGAGAA GGGTGTAAGCGT TTTA ACACCTACACCC CTTATTCAGAACCTT Ava_1374 1695857 - 1694427 - | sugar transferase TERM 1546 1695321 - 1695341 + g 77 -4.7 -5.07486 | overlap 1695323 ATTCTCTCGTTCCAG TAGCTTTAC ATG GTAAGGCTC TTTTTCTTCACCATC TERM 1547 1695323 - 1695339 + g 73 -7.3 -4.16307 | overlap 1695321 TCTCTCGTTCCAGTA GCTTTAC ATG GTAAGGC TCTTTTTCTTCACCA Ava_1375 1696887 - 1696114 - | glycosyl transferase WecB/TagA/CpsF Ava_1376 1698187 - 1697036 - | hypothetical protein Ava_1377 1699200 - 1698307 - | glycosyl transferase family protein TERM 1548 1698533 - 1698544 + g 74 -4.4 -5.07486 | GTATCTACCCAGCTA TTCC GGAA GGAA TTTTTATTACAAGTA Ava_1378 1700295 - 1699279 - | hypothetical protein TERM 1549 1699454 - 1699467 + g 80 -3.9 -5.25893 | opp_overlap 1699454 TTATCAGAAGTAATA TTGAA TTTT TTCAA TTTTTTAATCTGTGT Ava_1379 1701584 - 1700331 - | glycosyl transferase, group 1 TERM 1550 1700419 - 1700435 + g 70 -2.9 -4.96762 | CTTTCAGCTTTTTCT CTGGCGT AAA ATGACAG TTTTTGTAGTCTCTG TERM 1551 1700570 - 1700554 - G 76 -10.9 -2.53015 | opp_overlap 1700549, overlap 1700543 ATATCTTTTAAGCCA GTGGCAT TAA ATGCCAC AACGGGAGTACCACA TERM 1552 1700849 - 1700873 + g 78 -2.1 -5.47159 | TTCTGTCACTGGTTG CTTGTATTGCT CCG AACAGTACCAG TTTTTTATCTTGGGG Ava_1380 1702529 - 1701588 - | O-antigen polymerase Ava_1381 1704211 - 1702739 - | transposase IS66 TERM 1553 1703790 - 1703803 + g 71 -2.3 -5.09245 | overlap 1703790 GGACATTCTACTAGT TGCGC TACC GCGTG TTTTTCTACTTTTAC TERM 1554 1703925 - 1703941 + g 70 -3.6 -4.89063 | GTTTTACCTTGATGT CCTGGT TGCCC ACCTGG TTTCTTTTTCGGTGG TERM 1555 1704190 - 1704200 + g 70 -5.4 -4.50241 | opp_overlap 1704190, overlap 1704184 1704192 TTTCTCTGTCTAAAT CTTG AGG CAAG TTTTGGTTCATATTT Ava_1382 1704417 - 1704271 - | hypothetical protein TERM 1556 1704305 - 1704329 + g 70 -5.7 -4.30987 | AAAGTATCTAGCTTG TCGCCACCT AAAGGAG AGGTGGAGA TTTCTTGTGCAGGAT Ava_1383 1705380 - 1704454 - | hemolytic protein HlpA-like TERM 1557 1704518 - 1704534 + g 73 -3.7 -4.9725 | opp_overlap 1704509 AAAATATCTAAAGCT GTTGCTT TAT AAACAAC TTTTTGTGTAAAAGT TERM 1558 1705017 - 1705029 + g 77 -4.9 -4.94902 | opp_overlap 1705002, overlap 1705002 TACTAGAAATTCTCG TATCA TTT TGATA TTTTTCTAGTAATTC Ava_1384 1706742 - 1705420 - | polysaccharide biosynthesis protein TERM 1559 1706256 - 1706243 - G 78 -2.4 -5.4833 | GTATTTAATAAAAAA GCTA TATTTT TAGC AATAACAGCATATTT Ava_1385 1707771 - 1706818 - | glycosyl transferase family protein Ava_1386 1710183 - 1707979 - | lipopolysaccharide biosynthesis TERM 1560 1709463 - 1709487 + g 75 -8.7 -3.58854 | opp_overlap 1709468, overlap 1709468 GAGCGCGTAACTGTT CTAAACGAC CCGTAAC GTCGTTTAG TTGTGCTTGTGCTTC TERM 1561 1709535 - 1709549 + g 71 -10 -2.64726 | opp_overlap 1709529 1709530, overlap 1709534 1709530 GTTTGGAAACGGTAT CAACCG CTA CGGTTG CTTCCTGTTCTAGAG TERM 1562 1709732 - 1709711 - G 73 -8.9 -3.52192 | opp_overlap 1709711 1709710 TTTAAGGCTATATAA TTGTCAATA ACTT TATTGACAA CTTTGGCAGCTAGTG TERM 1563 1710582 - 1710598 + H 79 -5.1 -5.15634 | opp_overlap 1710582 CTGATTGGTGCTAAA TTACCGA TAA TCGGCAA TTTTTTCCTAGAATA Ava_1387 1712020 - 1712961 + | BNR repeat-containing glycosyl hydrolase TERM 1564 1713252 - 1713213 - f 95 -13 -3.59247 | gap 1, overlap 1713214 TAATAAGCGCCTAAA GCCGAATGGCTGCGGCAAA GAG TTTGA-GCAGCCATTCGGA AAGCATTGGCAGCAC TERM 1565 1713251 - 1713214 - f 100 -16.5 -2.75066 | gap 1, overlap 1713213 AATAAGCGCCTAAAG CCGAATGGCTGCGGCAAA GAG TTTGA-GCAGCCATTCGG AAAGCATTGGCAGCA Ava_1389 1713494 - 1713952 + | hypothetical protein Ava_1390 1717244 - 1714143 - | filamentous haemagglutinin-like TERM 1566 1716660 - 1716674 + g 70 -10 -2.52156 | overlap 1716659 1716656 1716662 ATTGCCTTCAACTTG CAGCCT ACT AGGCTG ATGTATTGATTCTCC TERM 1567 1717520 - 1717497 - R 81 -4.6 -5.29445 | opp_overlap 1717492 1717480 1717497 GTGTAATAAGAAAAA TCCTCACC AACAAGGA GATGAGGA TTTTGTTAATTGCAC Ava_1391 1718406 - 1717618 - | hypothetical protein Ava_1392 1718757 - 1719998 + | hypothetical protein Ava_1393 1721127 - 1720009 - | hypothetical protein TERM 1568 1720174 - 1720200 + g 74 -9.4 -3.36492 | ATTTGGTGCTATGTT GCTGGTGGCG ATCGCTA CGTCGCCAGC TTCTGCACTTCCACC TERM 1569 1720675 - 1720695 + g 88 -6.8 -5.09225 | opp_overlap 1720655 1720675 AGGAGTGCTAACAGA CCTCTGAG CGCCC CTCTGAGG TTTTTTGGCTGGACT TERM 1570 1721173 - 1721196 + r 76 -6 -4.67755 | gap 1 CAATTCTGGAGTTGA GGGGTCTG-AT TGA ATACAGTCCCC TTTTTAGCTAAGTCT Ava_1394 1721997 - 1721392 - | hypothetical protein TERM 1571 1721616 - 1721604 - G 75 -3.3 -5.24531 | overlap 1721607 ATGTCCGAGAAAAAA CAGGG CCG CGCTG ACCAGCAAAAAAGTA TERM 1572 1722875 - 1722888 + H 76 -3.1 -5.33405 | ATATTCAGTATTGTG GATGC GATC GTATC TTTTTGTTTACTGGA Ava_1395 1723759 - 1724001 + | hypothetical protein TERM 1573 1724530 - 1724499 - f 76 -9.8 -2.96656 | gap 1, opp_overlap 1724510, overlap 1724510 CACACATTCAAACCA GTTACAGAATATTTA TTG TAAAT-TTCTGTAAC ATACCGAGTAAATTT TERM 1574 1724645 - 1724613 - f 74 -10.1 -2.63073 | opp_overlap 1724612 1724615, overlap 1724612 1724615 CGCGTTCAATAACAT CAGAGACATAACA GAATTGA TGTTATATCTCTG CCTTACTTATATGTA Ava_1396 1724789 - 1725109 + | hypothetical protein Ava_1397 1725183 - 1726526 + | Band 7 protein Ava_1398 1726595 - 1727863 + | Band 7 protein TERM 1575 1728773 - 1728783 + G 100 -8.2 -4.88163 | TGATGCAGTACCAGT CGCC CTT GGCG TTTATTTTGTCTTCC Ava_1399 1728291 - 1729754 + | hypothetical protein Ava_1400 1729806 - 1731314 + | signal transducer ampG1 Ava_1401 1731299 - 1731715 + | hypothetical protein TERM 1576 1731968 - 1731984 + G 70 -5.9 -4.33928 | overlap 1731970 AATACATCGCCCCCT TACTAGT AGT ACTAGTG TTTATATTTGCCCTA Ava_1402 1731922 - 1732110 + | hypothetical protein Ava_1403 1732177 - 1732704 + | GCN5-related N-acetyltransferase Ava_1404 1732872 - 1733630 + | HEAT repeat-containing PBS lyase Ava_1405 1734151 - 1733744 - | mannose-6-phosphate isomerase type II Ava_1406 1735749 - 1734403 - | L-sorbosone dehydrogenase Ava_1407 1735919 - 1736650 + | RNA methyltransferase TrmH, group 1 TERM 1577 1737381 - 1737392 + G 75 -5.8 -4.5954 | opp_overlap 1737381 CTAGATTAAAGCCAA TGGC CAGA GCCA TTTTGTATGCTATAC Ava_1408 1737005 - 1738519 + | penicillin-binding protein, transpeptidase Ava_1409 1738985 - 1739647 + | Beta-Ig-H3/fasciclin TERM 1578 1739719 - 1739760 + F 72 -8.1 -3.54638 | opp_overlap 1739718 1739715 1739719, overlap 1739720 ATAACTACTAACAAG GGCTGTTAACTGTTGACTG TTAA CGGTCAACAGTTAACAAAA TTTACGAGGGATTAT TERM 1579 1739720 - 1739759 + F 81 -11.6 -2.72461 | opp_overlap 1739719 1739718 1739715, overlap 1739719 TAACTACTAACAAGG GCTGTTAACTGTTGACTG TTAA CGGTCAACAGTTAACAAA ATTTACGAGGGATTA TERM 1580 1740034 - 1740046 + F 85 -2.7 -5.93809 | CTGCCAAGTATATTA TACGA ATA TTGTA TTTTTTTTATCAGGC TERM 1581 1742363 - 1742336 - g 74 -4 -4.91459 | opp_overlap 1742356 GAAGATTTAGAAAAA GTCCTCGATAGC CTTA GCCCTCGTGAAC GCGATGTTCTCCGCC Ava_1410 1741364 - 1742536 + | RNA polymerase sigma factor RpoD TERM 1582 1742582 - 1742630 + T 84 -3.4 -5.60689 | gap 1, opp_overlap 1742593, overlap 1742593 TTGACCACTGACAAA T-AACTTAAAAACCTGGCAGT ACTAATAC ACTGTCAGGTTTTTTCGTTTA TTTTTTATTATCTAC TERM 1583 1742618 - 1742593 - T 78 -6.1 -4.8384 | opp_overlap 1742582 1742593 CAAATAACTTAAAAA CCTGGCAGTAC TAAT ACACTGTCAGG TTTTTTCGTTTATTT TERM 1584 1742593 - 1742618 + T 100 -6.9 -5.48163 | opp_overlap 1742593, overlap 1742582 CAAATAACTTAAAAA CCTGGCAGT ACTAATAC ACTGTCAGG TTTTTTCGTTTATTT Ava_1411 1742835 - 1742656 - | high light inducible protein Ava_1412 1743884 - 1743327 - | hypothetical protein Ava_1413 1745077 - 1743887 - | hypothetical protein TERM 1585 1744288 - 1744278 - G 80 -4.6 -5.19212 | AGCAGTACGAAAAAA CCGC CCC GCGA ACCATCTAAAGAACC Ava_1414 1746535 - 1745375 - | aldo/keto reductase Ava_1415 1747213 - 1746716 - | hypothetical protein Ava_1416 1747552 - 1748211 + | riboflavin synthase subunit alpha Ava_1417 1749868 - 1748297 - | peptidase M23B TERM 1586 1749392 - 1749422 + g 71 -9 -3.31183 | TACTTCTGGGTCTTT GGTAGGGGTAACTC GTG GAGTTTCTGCTACC TTGGGTTTAACTTCT TERM 1587 1749855 - 1749867 + g 70 -5.5 -4.5002 | TTATGGGCAGAGTTA TGGCG CTG CGTCA TTTGTTCTCTCTTTT Ava_1418 1750776 - 1749952 - | biotin--acetyl-CoA-carboxylase ligase TERM 1588 1750984 - 1750974 - g 74 -6.8 -4.34737 | overlap 1750976 CCACGAATTAACAAA GGTG CTG CACC CAGAAGCATCAGCAT Ava_1419 1750849 - 1751628 + | hypothetical protein Ava_1420 1752561 - 1751665 - | sodium symporter Ava_1421 1753894 - 1752659 - | hypothetical protein ubiE 1754719 - 1754030 - | ubiquinone/menaquinone biosynthesis methyltransferase TERM 1589 1754847 - 1754823 - R 95 -11.6 -4.43844 | opp_overlap 1754820 1754816 GTATGAGCGACAAAA TTCGCAGTTA TCAAG TAACTGCGAA CTGTGAATTGGCTTG Ava_1423 1755823 - 1754876 - | response regulator receiver (CheY) and GAF domain-containing protein Ava_1424 1756144 - 1757229 + | hypothetical protein TERM 1590 1757980 - 1757960 - g 72 -6.1 -4.30014 | overlap 1757954 1757962 TTCATGAAGCCAAAA GTTCTGGTA TAT CACCAGAGC AACTACGGCAATGGA Ava_1425 1757323 - 1759824 + | UvrD/REP helicase Ava_1426 1761306 - 1759819 - | glycoside hydrolase family protein TERM 1591 1761145 - 1761159 + g 73 -8.6 -3.61517 | CTCTAATACGGACTT GACTGT ATT ACAGTC TTCTTGGGGGGAGAT Ava_1427 1764151 - 1761383 - | Alpha amylase, catalytic region TERM 1592 1761581 - 1761601 + g 73 -3.9 -4.96848 | overlap 1761577 GAAGCGGGGGGTGAT GGCGATCAA TGT TTGCTCACC TTTTTGTCTGGCAAA TERM 1593 1761777 - 1761789 + g 71 -4.8 -4.61284 | opp_overlap 1761777 AGTTCGGAAATTAAG CCGA GAATA TCGG TTTTGCTTTGCTCTT TERM 1594 1762631 - 1762663 + g 73 -2.7 -5.15381 | opp_overlap 1762634, overlap 1762634 CATGACTTTTTCTAT AAAGTTCATCTCGTG ATG TAGGAGAGGAACTTG TTTTTTAGCTGTCTT TERM 1595 1763747 - 1763733 - G 70 -2.8 -4.9218 | overlap 1763734 1763746 GATTCACCATAAAAA TCCCCT AGC AAAGGA GCAAGGATACGCTCT Ava_1428 1766038 - 1764218 - | glycoside hydrolase family protein TERM 1596 1765432 - 1765418 - G 71 -8.6 -3.53091 | ACCTTCTGGGCCAAA GTGGTT ATA AACCAC ATCCAGCACTACAGC Ava_1429 1766415 - 1768343 + | glycoside hydrolase, starch-binding TERM 1597 1768399 - 1768374 - T 100 -12 -5.75478 | opp_overlap 1768373 1768372 AAGTAGATAAAAAAA TGGGGAAGAT TTGTTT ATCTTCCCCA CCTTGATTATTCTGC TERM 1598 1768490 - 1768505 + T 70 -9 -3.09897 | overlap 1768489 AGTTGTCGCTTTCTT GCAGAG CCGC CTCTGC CTTTGTCGTTTCTCC TERM 1599 1768794 - 1768829 + T 100 -12 -4.41348 | opp_overlap 1768805, overlap 1768797 ATGCACTTTATTCTG TACTGTAGAGACGTTG CATA CAACGTCTCTACATCA TTTATTTGGCGCAGC TERM 1600 1768797 - 1768826 + T 100 -18.1 -3.18452 | opp_overlap 1768805, overlap 1768794 CACTTTATTCTGTAC TGTAGAGACGTTG CATA CAACGTCTCTACA TCATTTATTTGGCGC Ava_1430 1769962 - 1768862 - | FMN-dependent alpha-hydroxy acid dehydrogenase Ava_1431 1770482 - 1771567 + | secretion protein HlyD TERM 1601 1772544 - 1772560 + G 84 -2.9 -5.58522 | overlap 1772546 TTTTATTTTGATTAT TGCTGTC GTT GTCAGTA TTTTTATTTTATATC Ava_1432 1771681 - 1772889 + | hypothetical protein TERM 1602 1772992 - 1772980 - g 95 -4.9 -5.88565 | GGCAGAAGAAAAAAA CAAAT TCT ATTTG GCATTAATCTTGAAA TERM 1603 1773884 - 1773898 + G 75 -5.8 -4.58395 | CGGCAAGTGACACTC CTATAA AAG TTATAG TTTTTGAACAATCAG TERM 1604 1774078 - 1774046 - g 77 -4.8 -5.05712 | overlap 1774036 AGAAAGAATTAAAAA TCCTTGAGGAATAC TGTAG GGAAGCCTCAAGGA CTGAAATTGATGTGT Ava_1433 1772917 - 1774143 + | cyclic nucleotide-binding domain-containing protein Ava_1434 1775050 - 1774175 - | peptidase M48, Ste24p Ava_1435 1776582 - 1775239 - | UDP-N-acetylglucosamine 1-carboxyvinyltransferase TERM 1605 1776063 - 1776077 + g 73 -10 -2.92656 | TCAAGGTTTCTGTCG CTCCCA CAC TGGGAG TATCTAGGTAAATTT TERM 1606 1777245 - 1777227 - H 78 -6.6 -4.55295 | CGGTCGATAAATAAA CCGCAAGC GGA ACTGGCGG AATTGGCAGACGCGC Ava_1436 1777382 - 1778164 + | tRNA/rRNA methyltransferase (SpoU) Ava_1437 1778440 - 1778198 - | hypothetical protein TERM 1607 1778772 - 1778757 - R 93 -6.8 -5.7946 | opp_overlap 1778757 TGTGCAATAAAAAAA GCCTGC CAAA GCAAGC TTAGTTTGTATAGAT Ava_1438 1780607 - 1778814 - | flavin reductase-like, FMN-binding TERM 1608 1780399 - 1780411 + g 72 -7.7 -3.87641 | opp_overlap 1780395 ATTACATAAGAGTTA GAGGT AGT ACCTC TTTCTAAAGCATATT Ava_1439 1782451 - 1780712 - | flavin reductase-like, FMN-binding TERM 1609 1782078 - 1782068 - G 73 -5.4 -4.60924 | opp_overlap 1782068, overlap 1782058 TAAACCTTCCAAAAA TTGC AAA GCAA TCTTAGAAGCCAAGA Ava_1440 1782730 - 1783119 + | transposase Ava_1441 1783089 - 1783529 + | transposase IS4 TERM 1610 1783744 - 1783773 + T 77 -10.1 -3.18452 | overlap 1783742 CACTTTATTCCGCAC TGTAGAGATGCTG CATG CAACGTCTCTACA TCATTTATTTGGCGC Ava_1442 1784499 - 1783906 - | hypothetical protein Ava_1443 1784697 - 1785371 + | hypothetical protein TERM 1611 1785792 - 1785735 - T 72 -7.7 -3.80573 | opp_overlap 1785758, overlap 1785737 1785756 1785779 CCCATGAGTATCAAA GACTCTCGCGTGAATATCAAAGACTCG CCCA CGAGTATTAAACACTCTCGCGTGAGTA TCAAAGACTCGCCCA TERM 1612 1785790 - 1785737 - T 82 -10.3 -3.48738 | opp_overlap 1785758, overlap 1785735 1785756 1785779 CATGAGTATCAAAGA CTCTCGCGTGAATATCAAAGACTCG CCCA CGAGTATTAAACACTCTCGCGTGAG TATCAAAGACTCGCC Ava_1444 1786471 - 1785926 - | TPR repeat-containing protein TERM 1613 1786210 - 1786231 + g 73 -5.1 -4.58946 | overlap 1786211 GCAAAGTCGCCGCTT TGCCTTGGA CATT TCCAATGCG TTCTTTTATTTCTAA Ava_1445 1787397 - 1786585 - | manganese and iron superoxide dismutase Ava_1446 1788197 - 1787616 - | hypothetical protein Ava_1447 1788408 - 1789082 + | two component transcriptional regulator Ava_1448 1789205 - 1789996 + | HAD family hydrolase TERM 1614 1790369 - 1790328 - f 76 -7.5 -4.09321 | gap 1, opp_overlap 1790328 1790332, overlap 1790335 1790338 TACGTAAGTAAATAA CTATCAATAAGGGCTGTTAA CAT TTAACAGCCCTCAC-AATGG ATTGTGCAACTTAAA TERM 1615 1790363 - 1790335 - f 100 -15.5 -3.35358 | opp_overlap 1790332 1790328, overlap 1790328 1790338 GTAAATAACTATCAA TAAGGGCTGTTAA CAT TTAACAGCCCTCA CAATGGATTGTGCAA TERM 1616 1790360 - 1790338 - f 100 -15 -3.79396 | opp_overlap 1790332 1790328, overlap 1790335 1790328 AATAACTATCAATAA GGGCTGTTAA CAT TTAACAGCCC TCACAATGGATTGTG Ava_1449 1790609 - 1791574 + | glycosyl transferase family protein TERM 1617 1792683 - 1792705 + G 71 -4.8 -4.72986 | opp_overlap 1792682 1792685, overlap 1792685 CAGCACCGAACAAGC CATTCCCTTG GGA CTAGGGAATA TTTTTAGTAACCGTC TERM 1618 1792685 - 1792703 + G 72 -7.4 -3.98256 | opp_overlap 1792682 1792685, overlap 1792683 GCACCGAACAAGCCA TTCCCTTG GGA CTAGGGAA TATTTTTAGTAACCG Ava_1450 1791703 - 1793178 + | surface antigen (D15) TERM 1619 1793241 - 1793263 + F 79 -4.9 -5.1971 | opp_overlap 1793241 CTTCCCCCAATCTAA GGCAAAAGA AAAAA TCTTTTACC TTTTTACTTTTTACT TERM 1620 1793812 - 1793822 + G 73 -8.2 -3.72532 | overlap 1793810 CAATTCTTTGGTAGC CGCC TTT GGCG TTCCTTTATTAATTC Ava_1451 1793291 - 1794067 + | hypothetical protein TERM 1621 1794369 - 1794352 - g 75 -5.6 -4.63932 | opp_overlap 1794343 1794351 GACTTGTGAAGAAAA TCTCCA GTTTTT TGGAGA AATTTATGGCTTAAG TERM 1622 1794800 - 1794782 - g 84 -5.3 -5.25699 | gap 1, overlap 1794785 ACTACACAAGAAAAA GAG-GCGA TCGC TCGCGCTC AAACCTACGGTTTTA Ava_1452 1794080 - 1794973 + | ABC transporter-like Ava_1453 1795148 - 1795690 + | hypothetical protein TERM 1623 1795840 - 1795884 + F 100 -16.7 -3.29461 | TGAGACCGGGTGTAA GGGTATAGGGGTGTAAGGGTT TCA AACATTTATACCTCTATACCC TTCTCCAAACCCTTG Ava_1454 1795951 - 1797186 + | esterase/lipase/thioesterase Ava_1455 1797404 - 1797790 + | putative 6-pyruvoyl tetrahydropterin synthase TERM 1624 1797803 - 1797839 + F 86 -8.2 -4.43877 | opp_overlap 1797794 1797810, overlap 1797806 1797808 TAAAATTAAATTGTT TATGAGAGTGCATTAT TACTC ATAATGCACTCTATTA TTTATTTGCGAGTTA TERM 1625 1797806 - 1797836 + F 86 -9.9 -4.32678 | opp_overlap 1797810, overlap 1797803 1797808 AATTAAATTGTTTAT GAGAGTGCATTAT TACTC ATAATGCACTCTA TTATTTATTTGCGAG TERM 1626 1797808 - 1797834 + F 95 -12.5 -3.75911 | opp_overlap 1797810, overlap 1797806 1797803 TTAAATTGTTTATGA GAGTGCATTAT TACTC ATAATGCACTC TATTATTTATTTGCG TERM 1627 1797832 - 1797810 - f 73 -9.3 -2.79312 | opp_overlap 1797808 1797806 1797803 AAATTGTTTATGAGA GTGCATTAT TACTC ATAATGCAC TCTATTATTTATTTG Ava_1456 1798225 - 1798443 + | hypothetical protein TERM 1628 1798503 - 1798462 - T 77 -8.1 -3.97834 | opp_overlap 1798461 1798460, overlap 1798463 1798465 TAATTCCACGATAAA TTAGTCCATAGTCAATGGC GATC GCTATTGGCTATGAACTAC CATTTATGGGTTTAG TERM 1629 1798502 - 1798463 - T 83 -11.6 -2.98219 | opp_overlap 1798461 1798460, overlap 1798462 1798465 AATTCCACGATAAAT TAGTCCATAGTCAATGGC GATC GCTATTGGCTATGAACTA CCATTTATGGGTTTA TERM 1630 1798500 - 1798465 - T 76 -9.8 -3.04122 | opp_overlap 1798461 1798460, overlap 1798463 1798462 TTCCACGATAAATTA GTCCATAGTCAATGGC GATC GCTATTGGCTATGAAC TACCATTTATGGGTT Ava_1457 1799697 - 1798507 - | diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase TERM 1631 1799448 - 1799436 - G 74 -4.8 -4.8048 | CCCTGAGAGCAAAAA CCTC TGCAT GAGG CTCACCTGCGCGGGG Ava_1458 1799875 - 1800252 + | fdxN element excision controlling factor XisI Ava_1459 1800991 - 1800389 - | hypothetical protein TERM 1632 1800929 - 1800958 + g 74 -6.4 -4.564 | gap 2, opp_overlap 1800928, overlap 1800930 ACGCGACAAAGGCAT ACGCCGGACGCTGA ATCT TC-GCG-CCGGCGG TTTTGATTTACCATT TERM 1633 1800930 - 1800957 + g 76 -9.9 -3.32756 | gap 2, opp_overlap 1800928, overlap 1800929 CGCGACAAAGGCATA CGCCGGACGCTGA ATCT TC-GCG-CCGGCG GTTTTGATTTACCAT Ava_1460 1801837 - 1801016 - | rod shape-determining protein MreC Ava_1461 1802975 - 1801932 - | rod shape-determining protein MreB TERM 1634 1802034 - 1802012 - G 70 -7.7 -3.65812 | overlap 1802026 CTGTTCCCAACACAA CACAGCTGA GAGGA TCAGCCGCG ATGTGGGTGACAATT Ava_1462 1803310 - 1803672 + | single-strand DNA-binding protein Ava_1463 1804482 - 1803736 - | hypothetical protein TERM 1635 1805443 - 1805471 + G 76 -9.5 -3.55444 | overlap 1805442 TTATTTGGCATCGAT GCTGTACCCGCAA TCT TTGCTGGGGCAGC TTTAACGGCTACCAG Ava_1464 1804930 - 1806387 + | Sodium/hydrogen exchanger Ava_1465 1806996 - 1808879 + | cell wall hydrolase/autolysin TERM 1636 1809603 - 1809593 - g 71 -6.8 -4.19624 | CATCGCCAAGAGAAA CTGC ACA GCAG CCAGTACCGACCATT Ava_1466 1809178 - 1811061 + | cell wall hydrolase/autolysin TERM 1637 1811131 - 1811176 + F 79 -7.1 -4.4261 | TAAACTGCGTGTAGA TACAGAATTGGGTAGTCAATT GGTA AATTGTCTGTTAAATTCTGTA TTTTAATATTCCAAA TERM 1638 1811394 - 1811413 + G 72 -6.4 -4.26189 | TAGACTACCTTACGG TATCCGCT CGCA AGCGGAGA TTTTAACGTTTGTGC Ava_1467 1811212 - 1812090 + | glutamate racemase Ava_1468 1812527 - 1812318 - | hypothetical protein TERM 1639 1813451 - 1813439 - H 72 -4.1 -4.93877 | overlap 1813448 TCCCAGTAAAGAAAA TGAGA ATA TCCCA AGCAAAACCTTGCAC Ava_1469 1813539 - 1814510 + | polyprenyl synthetase TERM 1640 1814560 - 1814600 + T 100 -15.7 -5.41143 | TGTTGACATTTGCGA TTTTGGATGTGGGATGTAT TGA AGAAATCCCACATCCAAAA TTTTTTTAGGCAATA Ava_1470 1815079 - 1814606 - | hypothetical protein Ava_1471 1815287 - 1816492 + | hypothetical protein TERM 1641 1816901 - 1816880 - g 75 -10.3 -2.7439 | opp_overlap 1816881, overlap 1816879 1816877 ACCTACCAGAAAGAG TTTTCCAAG AAAT CTTGGAAAA GTGCCAGCAGATGGT Ava_1472 1816681 - 1817457 + | hypothetical protein TERM 1642 1817719 - 1817678 - f 95 -14.6 -2.75081 | opp_overlap 1817678 1817682, overlap 1817675 1817674 TACTCCCAAAATTTA CTTTCGGGGAGTTCCTGT TTTCTT AGAGGAACTTCCCGAAAG TTTGTATCTATAAGC TERM 1643 1817678 - 1817719 + F 100 -16.8 -4.17296 | opp_overlap 1817678 1817675 1817674, overlap 1817682 TACTCCCAAAATTTA CTTTCGGGGAGTTCCTGT TTTCTT AGAGGAACTTCCCGAAAG TTTGTATCTATAAGC Ava_1473 1817849 - 1820110 + | transglutaminase-like TERM 1644 1820137 - 1820181 + F 73 -8.7 -3.38812 | opp_overlap 1820136, overlap 1820138 1820142 TTTTTCTAAATTTAC CTGGGGCGAGTGAAGCA AAAAGTCACAC TGCTTCACTCGCTTCAA TCTTATTAAGCACAC TERM 1645 1820138 - 1820180 + F 83 -12.2 -2.63073 | opp_overlap 1820136, overlap 1820137 1820142 TTTTCTAAATTTACC TGGGGCGAGTGAAGCA AAAAGTCACAC TGCTTCACTCGCTTCA ATCTTATTAAGCACA TERM 1646 1820142 - 1820176 + F 84 -11.6 -3.24423 | opp_overlap 1820136, overlap 1820138 1820137 CTAAATTTACCTGGG GCGAGTGAAGCA AAAAGTCACAC TGCTTCACTCGC TTCAATCTTATTAAG Ava_1474 1821150 - 1821416 + | hypothetical protein gmk 1821603 - 1822202 + | guanylate kinase TERM 1647 1822340 - 1822312 - T 100 -15.4 -3.69702 | TATTACCTAATACAA GGGGAACCACTA TAATG CAGTGGTTCCCC AATGATCAAAAACTA Ava_1476 1822876 - 1822358 - | photosystem I reaction center protein subunit XI TERM 1648 1822998 - 1823024 + r 80 -8.9 -3.88559 | gap 1, opp_overlap 1822998 CTTAAAATTATAAAA CTCGT-AAGCTA ATTC TAGCTTTACGAG TTTCTAGAAATAATT TERM 1649 1823024 - 1822998 - R 90 -8.9 -4.67635 | gap 1, opp_overlap 1822998 CTTAAAATTATAAAA CTCGT-AAGCTA ATTC TAGCTTTACGAG TTTCTAGAAATAATT Ava_1477 1823296 - 1823147 - | photosystem I reaction center subunit IX Ava_1478 1823828 - 1823334 - | photosystem I reaction center protein PsaF, subunit III Ava_1479 1824112 - 1825152 + | O-sialoglycoprotein endopeptidase TERM 1650 1825148 - 1825177 + T 91 -13.7 -2.57132 | opp_overlap 1825149 1825154, overlap 1825154 TGATGAAGTTATATC AGTAAAGACGCGA TTAA TCGCGTCTTTACA ATTATCAGAGACACG TERM 1651 1825176 - 1825149 - T 100 -17.2 -2.67209 | opp_overlap 1825148 1825154, overlap 1825154 GATGAAGTTATATCA GTAAAGACGCGA TTAA TCGCGTCTTTAC AATTATCAGAGACAC TERM 1652 1825171 - 1825154 - T 88 -11.3 -3.82218 | opp_overlap 1825154 1825148, overlap 1825149 AGTTATATCAGTAAA GACGCGA TTAA TCGCGTC TTTACAATTATCAGA TERM 1653 1825154 - 1825171 + T 88 -11.3 -3.69354 | opp_overlap 1825149 1825154, overlap 1825148 AGTTATATCAGTAAA GACGCGA TTAA TCGCGTC TTTACAATTATCAGA Ava_1480 1826138 - 1825224 - | Alpha/beta hydrolase fold Ava_1481 1826989 - 1826270 - | hypothetical protein Ava_1482 1827371 - 1827922 + | GCN5-related N-acetyltransferase TERM 1654 1827977 - 1827961 - f 83 -5.9 -5.1615 | overlap 1827941 CCAATATCTAAAAAA TCAGCTA TGA TAGCTAA AGCTTGTGTGAATAA TERM 1655 1828138 - 1828081 - f 100 -15.5 -3.41051 | gap 1, opp_overlap 1828098, overlap 1828098 TCATCCCGATTAGAA TTACTGATAAGAAAAAACCATACCTC TGAAAAC GAGGTATGGTTTTTTCTTATGA-TAA AAATCAGAACAATTA TERM 1656 1828122 - 1828098 - f 100 -10.1 -5.56673 | opp_overlap 1828098, overlap 1828081 ACTGATAAGAAAAAA CCATACCTC TGAAAAC GAGGTATGG TTTTTTCTTATGATA TERM 1657 1828098 - 1828122 + F 100 -10.1 -5.58179 | opp_overlap 1828098 1828081 ACTGATAAGAAAAAA CCATACCTC TGAAAAC GAGGTATGG TTTTTTCTTATGATA TERM 1658 1828899 - 1828884 - g 95 -7.6 -5.04601 | opp_overlap 1828883 GTTACAAATGAAAAA GGCTTA CCAT TAAGCC GTCCTTTACCAAACG Ava_1483 1828725 - 1829555 + | hypothetical protein Ava_1484 1829558 - 1830484 + | modification methylase HemK Ava_1485 1830712 - 1831296 + | SUA5/yciO/yrdC-like Ava_1486 1831415 - 1832332 + | histidine kinase Ava_1487 1832765 - 1832295 - | GCN5-related N-acetyltransferase TERM 1659 1832784 - 1832801 + r 73 -6.3 -4.37971 | overlap 1832773 1832772 TAGTTGCTCCGATAG GGCAGTA TTTT TACTGTC TTTTAGTCCTATTTT Ava_1488 1833284 - 1832871 - | hypothetical protein secF 1834328 - 1833351 - | preprotein translocase subunit SecF secD 1835749 - 1834325 - | preprotein translocase subunit SecD TERM 1660 1835394 - 1835404 + g 79 -3.2 -5.27335 | GCTAGTAGTTGGGTT TCAG TCC CTGG TTTTTGTTTACGGAA Ava_1491 1836899 - 1835916 - | transketolase Ava_1492 1837637 - 1837011 - | hypothetical protein TERM 1661 1837688 - 1837726 + H 100 -15.4 -5.54079 | opp_overlap 1837692, overlap 1837689 1837692 CCTAAATTATTCATG AGAAGATGCCCGACTTGT TGC ATAAGTCGGGCATCTGCA TTTTTTGCTTTTTGA TERM 1662 1837689 - 1837725 + H 100 -18.9 -3.90007 | opp_overlap 1837692, overlap 1837688 1837692 CTAAATTATTCATGA GAAGATGCCCGACTTGT TGC ATAAGTCGGGCATCTGC ATTTTTTGCTTTTTG TERM 1663 1837722 - 1837692 - H 100 -17 -3.43264 | opp_overlap 1837689 1837688 1837692 AATTATTCATGAGAA GATGCCCGACTTGT TGC ATAAGTCGGGCATC TGCATTTTTTGCTTT TERM 1664 1837692 - 1837722 + H 100 -19.2 -2.96808 | opp_overlap 1837692, overlap 1837689 1837688 AATTATTCATGAGAA GATGCCCGACTTGT TGC ATAAGTCGGGCATC TGCATTTTTTGCTTT Ava_1493 1837892 - 1841215 + | small GTP-binding protein domain-containing protein Ava_1494 1841510 - 1841220 - | XRE family transcriptional regulator Ava_1495 1842770 - 1841754 - | sulphate transport system permease protein 1 Ava_1496 1843387 - 1842875 - | hypothetical protein TERM 1665 1843441 - 1843458 + H 76 -9.9 -3.06261 | opp_overlap 1843439 1843435 1843443, overlap 1843443 AGTAGTTAATGTACA GACGTTG TATA CAACGTC TCTTAAACATTGGCA TERM 1666 1844667 - 1844654 - g 71 -2.4 -5.24129 | CGCTGGGATAAAAAA TACG GACTCA CGTA CAAAGTACTGGACAT Ava_1497 1843622 - 1844878 + | geranylgeranyl reductase TERM 1667 1844921 - 1844899 - T 95 -8.4 -4.93898 | opp_overlap 1844899 AGATGATCATAAAAA CTCCACCCAT AAT AGGGATGGAG TTTGTCAGTGGTCAG TERM 1668 1845038 - 1845020 - T 74 -3.8 -5.09685 | opp_overlap 1845023, overlap 1845023 1845024 GAAGACACATAAAAA CCACCC ATTCTTA GGATGG AGTATTAAACCACCT TERM 1669 1845098 - 1845129 + T 100 -12.4 -4.43879 | opp_overlap 1845090 1845098 AAATTAATTGTCAAA TGGCACTCCCTG AATACCAA TAGGGAGTGCCA TTTTGATTACCTAGT TERM 1670 1845129 - 1845098 - T 87 -11.7 -3.6288 | opp_overlap 1845098, overlap 1845090 AAATTAATTGTCAAA TGGCACTCCCT GAATACCAAT AGGGAGTGCCA TTTTGATTACCTAGT Ava_1498 1846091 - 1845348 - | two component transcriptional regulator TERM 1671 1846183 - 1846173 - H 78 -4 -5.31275 | CTTGATTATAAAAAA GATT TTA AATC TAACATAAACCTTAA TERM 1672 1846668 - 1846691 + G 70 -6 -4.4078 | overlap 1846659 GCTGCTATGGGATGT CCCAGTAAAT TTTG GTTTACAGGG TTTTCCTTAGGAGGA Ava_1499 1846248 - 1847309 + | Alpha/beta hydrolase fold TERM 1673 1847373 - 1847410 + T 100 -14.5 -3.19246 | opp_overlap 1847384 TGTACATATTTCATT TTATTCACAAAGCCT ATAAAAGC AGGCTTTGTGAATAA TTCAGTTGACATTAA Ava_1500 1848169 - 1847549 - | hypothetical protein TERM 1674 1848318 - 1848333 + H 78 -7.6 -4.2704 | AAAAAGCTTTAATTC GCCTAT ACTA ATAGGC TTTGTTGATAATAGC TERM 1675 1848421 - 1848383 - H 70 -3.2 -4.95167 | opp_overlap 1848415, overlap 1848375 1848384 1848415 GAATTAATAACAAAA TTGGTGTTGTTAGACATT CAT AATGTCTAAAACCACTAG GGGGAATTTTATCAT Ava_1501 1848876 - 1850198 + | hypothetical protein TERM 1676 1850282 - 1850266 - T 77 -3 -5.4505 | gap 1, opp_overlap 1850245 GCTGGCAATAAAAAA TG-AGGC GATC GCCTTCA TCATGACTTCTTGAC Ava_1502 1850867 - 1850283 - | hypothetical protein Ava_1503 1851513 - 1850932 - | hypothetical protein Ava_1504 1852355 - 1851606 - | HAD family hydrolase TERM 1677 1852375 - 1852389 + r 86 -10 -4.18763 | opp_overlap 1852375 AGTCAAAATAAAAAA GAGGGA AAA TCCCTC TTTTAAAAATTTCTT TERM 1678 1852389 - 1852375 - R 100 -10 -5.80951 | opp_overlap 1852375 AGTCAAAATAAAAAA GAGGGA AAA TCCCTC TTTTAAAAATTTCTT Ava_1505 1853463 - 1852432 - | 30S ribosomal protein S1 TERM 1679 1853247 - 1853263 + g 83 -9.3 -3.91473 | ATTGTAAAACTTCTT CCGGGGC ATC GACCCGG TTTATAGACATTTCT TERM 1680 1853714 - 1853757 + r 100 -20 -3.54408 | opp_overlap 1853719, overlap 1853701 1853700 1853719 AGGGATGTATTCATC GAAAATATCCGTTGCTTTTC TTGA GAAAAACAACGGATATTTTC TTCATTTGACTGAGA TERM 1681 1853752 - 1853719 - R 100 -16.3 -4.19817 | opp_overlap 1853701 1853700 1853714 1853719 TGTATTCATCGAAAA TATCCGTTGCTTTTC TTGA GAAAAACAACGGATA TTTTCTTCATTTGAC TERM 1682 1853719 - 1853752 + r 100 -14.1 -4.84642 | opp_overlap 1853719, overlap 1853701 1853700 1853714 TGTATTCATCGAAAA TATCCGTTGCTTTTC TTGA GAAAAACAACGGATA TTTTCTTCATTTGAC TERM 1683 1853769 - 1853799 + r 76 -4.7 -4.97383 | overlap 1853778 TTTCTTCATTTGACT GAGAAAGTGGGCA TTAGC TGCCTTATTTCTC TTCTTTTTTTTCAAT psbT 1853898 - 1853791 - | photosystem II reaction center protein T TERM 1684 1853933 - 1853955 + r 76 -9.2 -3.36515 | overlap 1853931 GTATTGGGTATTGGG TACTGGGTAC TAG GTACTCGGTA TATTTCCCAGTCCCC Ava_1507 1855518 - 1853989 - | photosystem antenna protein-like TERM 1685 1854955 - 1854943 - G 70 -7.7 -3.58343 | overlap 1854952 GCCACCAGGGTTAAA TGGGT TAA ACCCA TCTGGACCCCATTCG Ava_1508 1856289 - 1855966 - | hypothetical protein Ava_1509 1856924 - 1858543 + | extracellular solute-binding protein TERM 1686 1858576 - 1858629 + F 100 -17.1 -3.80855 | opp_overlap 1858572 ATAGTAAACAGTCCA TAGTCATTAGTGATTAGTCCGTAAT CTAA ATAACTGACTAATCACTAACGACTA TTGATTTTTGACCGA Ava_1510 1858707 - 1859732 + | binding-protein dependent transport system inner membrane protein TERM 1687 1860458 - 1860442 - g 75 -7.2 -4.32049 | overlap 1860433 1860454 TACAATCGAGGAAAA CCCGCC GGAAA AGCGGG TGGAACAACTCCGCA Ava_1511 1859789 - 1860697 + | ribonuclease H Ava_1512 1861951 - 1860761 - | glycosyl transferase family protein TERM 1688 1861642 - 1861654 + g 86 -9.1 -4.2828 | GAAAGCGCGGGTCTT GCTGC TGT GCAGC TTTTACTAAGTCGGG Ava_1513 1863094 - 1862186 - | hypothetical protein TERM 1689 1863050 - 1863038 - G 74 -4.1 -5.06451 | TACTAGTCCAAAAAA CATCG AGA CGATA TGACCAATAAGGCAT TERM 1690 1863688 - 1863698 + G 73 -2.6 -5.1356 | TCTGGGGTATTCTTG TATT AGC AATA TTTTTCTTGATAGGA Ava_1514 1863654 - 1864019 + | hypothetical protein TERM 1691 1864091 - 1864065 - T 86 -10.2 -4.08546 | opp_overlap 1864064 1864068, overlap 1864068 AGTATTAACTACAAA CAAGGTGAGC GGATAAT GCCCACCTTG GTAATTTAGCCTGCT rpmA 1864378 - 1864097 - | 50S ribosomal protein L27 rplU 1864798 - 1864406 - | 50S ribosomal protein L21 TERM 1692 1864534 - 1864548 + g 82 -4.9 -5.27023 | overlap 1864525 TTTCCTGGCGATGCC CCCGT TTTTT GCGGG TTTTCTTTTTCGGCT TERM 1693 1865066 - 1865092 + H 73 -5.9 -4.46854 | gap 1, opp_overlap 1865065 1865066 AACAGCACCAACAAG TCTGAGCAAAGG ATCT CCTG-GCTCAGA TTTTCCCTTTTCTAT Ava_1517 1865572 - 1866666 + | hypothetical protein TERM 1694 1866689 - 1866672 - T 79 -11.3 -2.95521 | opp_overlap 1866674 1866686, overlap 1866667 1866674 GGGAGAGTAATTAGA GACGCGA TTAA TCGCGTC TGTACAATTGTCAGA Ava_1518 1867035 - 1866739 - | hypothetical protein TERM 1695 1867086 - 1867126 + r 81 -11.4 -2.70932 | opp_overlap 1867089 GTACTGAATTTGAAT TTATCAGTGAACAGTTGT TAATT ATTACTGTTCACTGATGA TAATTACCGGACACC Ava_1519 1868254 - 1867130 - | protoporphyrin IX magnesium-chelatase TERM 1696 1868623 - 1868636 + G 82 -8.1 -4.55128 | opp_overlap 1868623 TCCGAATGGGATAAA CCAGG CTCT CCTGG TTTTGCTTTAGCCAT TERM 1697 1868636 - 1868623 - g 74 -8.1 -3.92522 | opp_overlap 1868623 TCCGAATGGGATAAA CCAGG CTCT CCTGG TTTTGCTTTAGCCAT TERM 1698 1870038 - 1870020 - g 71 -8.2 -3.53563 | overlap 1870029 AGAGTTGCTGCTAAA TCGAAGAA ATT CTCTTCGA GAAACCCTCAAGCCA TERM 1699 1870041 - 1870029 - g 72 -6.3 -4.29326 | overlap 1870020 GCTAAATCGAAGAAA TTCTC TTC GAGAA ACCCTCAAGCCAATT Ava_1520 1868569 - 1870182 + | Beta-lactamase Ava_1521 1871464 - 1870274 - | cell cycle protein TERM 1700 1870925 - 1870939 + g 83 -11.4 -2.93991 | opp_overlap 1870920, overlap 1870920 TAGCCAGATAGTCAT GCCGCA GAG TGCGGC TGTACTTAAGTTAGG TERM 1701 1871319 - 1871303 - G 70 -7.3 -3.80094 | CTTAAAGTAATACAA TCCATCA CCT TGACGGA CATCAGCCACTACGT TERM 1702 1871404 - 1871390 - G 70 -9.2 -2.77994 | opp_overlap 1871390 GAGAAATGTTAACCA GCGCAG CAA CCGCGC TTCTAATGCCCAGGT Ava_1522 1872677 - 1871664 - | hypothetical protein Ava_1523 1873379 - 1872762 - | forkhead-associated Ava_1524 1874051 - 1873383 - | hypothetical protein Ava_1525 1874956 - 1874054 - | hypothetical protein TERM 1703 1875141 - 1875160 + G 80 -5 -5.11112 | CCAGCACCAAAAGGG GCATCAAT TCAT ATTGAGGC TTTTTCTTCGGCTTT Ava_1526 1875084 - 1876277 + | glycosyl transferase, group 1 Ava_1527 1877414 - 1876260 - | glycosyl transferase, group 1 Ava_1528 1878439 - 1877420 - | aldo/keto reductase Ava_1529 1878801 - 1878466 - | cytochrome c6 Ava_1530 1879248 - 1880048 + | hypothetical protein TERM 1704 1880059 - 1880101 + T 86 -10 -4.10429 | opp_overlap 1880065, overlap 1880065 AGTAATCGGATAGAT GAAAAATAGCCCAGGCTTAT CAG ATAAGTCTGGGCTATTTAAA TTTTGGAGAATAATT TERM 1705 1880065 - 1880095 + T 100 -17.8 -3.92659 | opp_overlap 1880065, overlap 1880059 CGGATAGATGAAAAA TAGCCCAGGCTTAT CAG ATAAGTCTGGGCTA TTTAAATTTTGGAGA TERM 1706 1880095 - 1880065 - T 100 -15.6 -4.84527 | opp_overlap 1880059 1880065 CGGATAGATGAAAAA TAGCCCAGGCTTAT CAG ATAAGTCTGGGCTA TTTAAATTTTGGAGA TERM 1707 1880178 - 1880166 - T 74 -4.8 -4.88918 | opp_overlap 1880147 1880166 TTATCGTAAATAAAA GGGT TTAAG ACCC CTCTCTTACAAAGTT TERM 1708 1880220 - 1880191 - T 95 -12.9 -3.85698 | gap 1, opp_overlap 1880192 1880193, overlap 1880192 CCCCTCTCTTACAAA GTTCTGATCGCCGG AAG CCGGCGCTCAGA-C TTTGCGCTACGTCTA TERM 1709 1880192 - 1880220 + T 100 -13.1 -3.61654 | opp_overlap 1880191 1880192, overlap 1880193 CCCTCTCTTACAAAG TTCTGATCGCCGG AAG CCGGCGCTCAGAC TTTGCGCTACGTCTA TERM 1710 1880220 - 1880192 - T 90 -13.1 -2.91276 | opp_overlap 1880192 1880193, overlap 1880191 CCCTCTCTTACAAAG TTCTGATCGCCGG AAG CCGGCGCTCAGAC TTTGCGCTACGTCTA TERM 1711 1880193 - 1880219 + T 100 -16.6 -2.76671 | opp_overlap 1880191 1880192, overlap 1880192 CCTCTCTTACAAAGT TCTGATCGCCGG AAG CCGGCGCTCAGA CTTTGCGCTACGTCT TERM 1712 1880244 - 1880284 + T 81 -8.3 -4.24432 | overlap 1880246 ACGTCTATACGTAGT ATCATTTTCAGGCGGGGTT TAA ATTCCCGTCTGAAAATGTC TTTAATTTTGAATTT TERM 1713 1880246 - 1880282 + T 100 -15.3 -3.70102 | overlap 1880244 GTCTATACGTAGTAT CATTTTCAGGCGGGGTT TAA ATTCCCGTCTGAAAATG TCTTTAATTTTGAAT TERM 1714 1880409 - 1880388 - T 85 -7.3 -5.03994 | gap 1, opp_overlap 1880388 1880390 GGCTATATATAAAAA TAGG-CGGGA ATT CCCCGACCTA TCTAATTCAAAAAGG Ava_1531 1880617 - 1880441 - | hypothetical protein Ava_1532 1881105 - 1880695 - | membrane protein of unknown function Ava_1533 1881693 - 1881373 - | ferredoxin (2Fe-2S) Ava_1534 1883867 - 1881708 - | RNA binding S1 TERM 1715 1881994 - 1882010 + g 77 -5 -4.98857 | overlap 1881994 TACTTAAATTCTGCA CGGGGG TCTCT CCCCGG TTTTTCTAATTCGCT TERM 1716 1881994 - 1882009 + g 73 -8.2 -3.5823 | overlap 1881994 TACTTAAATTCTGCA CGGGGG TCTC TCCCCG GTTTTTCTAATTCGC TERM 1717 1882250 - 1882287 + g 73 -5.5 -4.58395 | CCTGTTCAAAAGCTT TCGGCCCCAACTTGGGA ACCT TCAAAAGTTGGCGACGA TTTTTAAAAGCTCCA Ava_1535 1884106 - 1884312 + | hypothetical protein TERM 1718 1884407 - 1884424 + F 83 -2.1 -5.80817 | GCACCTTACTGACAA TAAATTG GGAA TAATTTA TTTTTTTGTGTTCCC Ava_1536 1884746 - 1885378 + | cobyrinic acid a,c-diamide synthase TERM 1719 1885741 - 1885724 - g 90 -4.1 -5.73563 | opp_overlap 1885735, overlap 1885735 ACGAAACCAAAAAAA CTGCC CTACAACT GGCAG AAGCTAACTCCCAGC Ava_1537 1885378 - 1886001 + | hypothetical protein TERM 1720 1887798 - 1887810 + G 76 -2.6 -5.28176 | TCGGAGCTACATTTT GGCT TGTGC GGCC TTTTTTATCCCTAAC Ava_1538 1886315 - 1888012 + | hypothetical protein Ava_1539 1888305 - 1888838 + | Dual specificity protein phosphatase TERM 1721 1889381 - 1889367 - g 71 -8.6 -3.42503 | CTGTAATATTCATAA TCCTGA CTT TCAGGA AATGATCCTCACTTC Ava_1540 1889023 - 1889985 + | hypothetical protein TERM 1722 1891178 - 1891164 - g 87 -8.6 -4.57218 | ACAAGACAATTAAAA TCTGGA ATC TCCAGA CATTCAAGTTAAAAA Ava_1541 1890053 - 1891822 + | WD-40 repeat-containing protein Ava_1542 1892736 - 1891825 - | hypothetical protein TERM 1723 1892367 - 1892349 - G 75 -7.4 -4.30809 | opp_overlap 1892349 TAATAGTGAGTAAAA TTCCACAC CAA GCGCGGAA ATTTAACTGTTCTTG Ava_1543 1892987 - 1893337 + | hypothetical protein TERM 1724 1893968 - 1893933 - f 79 -10.6 -3.14132 | opp_overlap 1893919 GGTTGGGTGGAGGAA CGGAACCCAACA TTCTCAAGACTT TGTTGGGTTCCG CTATCGCTCCACCCA TERM 1725 1894258 - 1894273 + G 77 -6.1 -4.72127 | TGATTGTCCTCATTG GCTGC TTAGTT GCAGC TTTTGTCTATTATGT Ava_1544 1894101 - 1895654 + | small GTP-binding protein domain-containing protein TERM 1726 1895702 - 1895755 + F 86 -9.8 -4.08767 | gap 1, opp_overlap 1895716 TCTTGCGTCAGGGCT GTCCATAGTCAAGAGTCCAGAGTTA AAGAC TAGCT-TGGACTGTGGACTTTGGAC TTTTGACAACCTGAG Ava_1545 1895836 - 1896528 + | hypothetical protein TERM 1727 1896683 - 1896694 + G 89 -7.2 -5.03145 | overlap 1896685 ATTTTTTGTACTCAC GCCG ATAG CGGC TTTTTTAGCGGCTTC TERM 1728 1896925 - 1896895 - g 76 -2.7 -5.28683 | gap 1, overlap 1896896 1896897 AGGAATATGAAAAAA CCCGTC-AATCAGT GCAA ACTAATTTGACGAA AACTCAAAACCAACT TERM 1729 1897065 - 1897037 - g 77 -4.5 -5.04733 | overlap 1897062 TAATGACAAAGAAAA GCAATTACAGAAG TCT CTCCAGGAACTGC AAAAATTTGCGGCTG Ava_1546 1896645 - 1898231 + | abortive infection protein TERM 1730 1898379 - 1898429 + F 100 -16.2 -3.55071 | opp_overlap 1898393 1898410 1898411, overlap 1898380 1898393 ATTGATCCCCCCTAA CCCCCCTTAAAAAGGGGGGAAATG AAT CAAAGTCCCCCTTTTTAAGGGGGA TTTAGGGGGATCTAA TERM 1731 1898380 - 1898428 + F 100 -19.7 -2.72829 | opp_overlap 1898393 1898410 1898411, overlap 1898379 1898393 TTGATCCCCCCTAAC CCCCCTTAAAAAGGGGGGAAATG AAT CAAAGTCCCCCTTTTTAAGGGGG ATTTAGGGGGATCTA TERM 1732 1898430 - 1898410 - f 86 -9.7 -4.04394 | opp_overlap 1898393 1898380 1898379, overlap 1898393 1898411 GGGAAATGAATCAAA GTCCCCCTT TTT AAGGGGGAT TTAGGGGGATCTAAA TERM 1733 1898429 - 1898411 - f 93 -13.2 -3.01914 | opp_overlap 1898393 1898380 1898379, overlap 1898393 1898410 GGAAATGAATCAAAG TCCCCCTT TTT AAGGGGGA TTTAGGGGGATCTAA TERM 1734 1898741 - 1898717 - f 87 -12.1 -3.27704 | opp_overlap 1898714, overlap 1898712 ATTTTTGAAATTTAA GTAGGGCGGGC ATT GCCTACCCTAC AGATACTTATATCAT Ava_1547 1899236 - 1899511 + | hypothetical protein Ava_1548 1899974 - 1902415 + | copper-translocating P-type ATPase TERM 1735 1902471 - 1902429 - f 76 -9.8 -2.97779 | opp_overlap 1902429, overlap 1902428 AGCAAAATTAAGAAC CCCTCTCCAACCTCTCCCCG ACG CGGGGAGAGGCTTAAAACCG TTATGGTTAAAGCTA TERM 1736 1903072 - 1903058 - g 74 -4.4 -5.03314 | GCGACTGCCAAAAAA TAATAA TAG TTATTA TTACCGGATTGTTGA Ava_1549 1902882 - 1903310 + | FHA domain-containing protein Ava_1550 1903747 - 1903400 - | hypothetical protein Ava_1551 1904727 - 1904032 - | rhomboid-like protein Ava_1552 1904892 - 1907015 + | TPR repeat-containing serine/threonin protein kinase Ava_1553 1907464 - 1908399 + | hypothetical protein TERM 1737 1908461 - 1908420 - T 79 -10.3 -3.1855 | opp_overlap 1908423 1908426, overlap 1908430 TTGGTCAATAGTCAA TGGTAATGTAGAGACGTTG CATG CAACGTCTCTACATTATTT ATTGGGTGCAACTTC TERM 1738 1908423 - 1908458 + T 100 -20.8 -4.20516 | opp_overlap 1908420 1908430, overlap 1908426 GTCAATAGTCAATGG TAATGTAGAGACGTTG CATG CAACGTCTCTACATTA TTTATTGGGTGCAAC TERM 1739 1908426 - 1908455 + T 100 -18.1 -4.22554 | opp_overlap 1908420 1908430, overlap 1908423 AATAGTCAATGGTAA TGTAGAGACGTTG CATG CAACGTCTCTACA TTATTTATTGGGTGC TERM 1740 1908451 - 1908430 - T 87 -13.1 -2.55074 | opp_overlap 1908426 1908423, overlap 1908420 GTCAATGGTAATGTA GAGACGTTG CATG CAACGTCTC TACATTATTTATTGG Ava_1554 1909991 - 1908495 - | aldehyde dehydrogenase TERM 1741 1908597 - 1908613 + g 73 -5.8 -4.41348 | GGTGGTGCCTGCTTC CCGGTG TCCGT TACCGG TTTGTTTGACACCAC Ava_1555 1910765 - 1910052 - | putative cyclase Ava_1556 1915910 - 1910952 - | ribosome assembly protein 4 (RSA4) TERM 1742 1913963 - 1913951 - G 72 -6.3 -4.38322 | GCAACGATAAAATAA CTTTC ACT GAAAG AACGTGCAGACATTC TERM 1743 1914172 - 1914218 + g 76 -9.6 -3.5241 | opp_overlap 1914178 1914182, overlap 1914175 GAATGTTGAGGTTCT GAAGGAGAACGTTGAGGTTCTG AAC TAGAATGTTGAGGTTCTCCTTC TCTTTGTCCCCCATC TERM 1744 1915055 - 1915039 - G 70 -8.1 -3.57808 | overlap 1915037 GCTAACTTATAAAGA GATTTAG CAA CTAAATC TGCACGTTGAATCTG Ava_1557 1917344 - 1915992 - | hypothetical protein TERM 1745 1917585 - 1917619 + r 77 -10 -3.19192 | TAATCAGTTATAGAT TTTCAGACCCTTCCCT ACA AGGGAAGGGGTTGGGG TTAGGTTCCGTCGAA Ava_1558 1918460 - 1917738 - | two component LuxR family transcriptional regulator TERM 1746 1918311 - 1918321 + g 71 -8.2 -3.56594 | TACCACCGCTACATC CGGC TTC GCCG TTTCCAAAAGTTTCA TERM 1747 1918828 - 1918878 + H 88 -7.6 -4.83615 | opp_overlap 1918821 1918826 1918825, overlap 1918838 TATATATACGAAGTC TGATTACTCAGATCCCCGACTTCT TGA AGAAGTCGGGGATCTTGTTTAGAA TTTTTATGAGGGATG TERM 1748 1918838 - 1918868 + H 100 -22.8 -4.01315 | opp_overlap 1918821 1918826 1918825, overlap 1918828 AAGTCTGATTACTCA GATCCCCGACTTCT TGA AGAAGTCGGGGATC TTGTTTAGAATTTTT Ava_1559 1918899 - 1920425 + | PAS/PAC sensor Signal transduction histidine kinase TERM 1749 1920625 - 1920596 - f 82 -11.7 -2.80988 | opp_overlap 1920584 1920600, overlap 1920593 1920600 GTATAGTACTAATTA CTAATTCATGAAT AACT ATTCACGAATTAG CTAGCCTCCTATAAA Ava_1560 1920663 - 1921094 + | response regulator receiver domain-containing protein Ava_1561 1921346 - 1922677 + | response regulator receiver Signal transduction histidine kinase TERM 1750 1923700 - 1923688 - g 71 -4.8 -4.69214 | opp_overlap 1923688 CAGGGAAGAAATAAA CGCT CAGGT AGCG GTTTAGGTTTGCATT Ava_1562 1922707 - 1923816 + | response regulator receiver Signal transduction histidine kinase TERM 1751 1924068 - 1924083 + T 72 -7.6 -3.79906 | TACGGTCTTGACCCC CAGCAA GAAG TTGCTG TTCTTCTGCGGATAA TERM 1752 1924257 - 1924219 - T 93 -13.5 -3.05561 | opp_overlap 1924214, overlap 1924214 1924224 AGATATTAAATTATA CTCAAGCTATAAATTAA AAAAA TTAATTTATAGCTGGAG ATCGATGTAATAAGT TERM 1753 1924252 - 1924224 - T 79 -10.6 -3.17725 | opp_overlap 1924214, overlap 1924219 1924214 TTAAATTATACTCAA GCTATAAATTAA AAAAA TTAATTTATAGC TGGAGATCGATGTAA Ava_1563 1926056 - 1924290 - | extracellular solute-binding protein TERM 1754 1924543 - 1924569 + g 70 -3.8 -4.84017 | GGATTACAGTAACGT GAATGATTGG ATTTTGA CCAGTTATTC TTTTTCTGGGGAATT TERM 1755 1926147 - 1926193 + r 73 -3.2 -5.14698 | opp_overlap 1926144 1926147 1926149, overlap 1926144 1926150 1926152 GAATGTAATAAATAG TACTACTATTTCTGAATGTTGT TTT AAAATACTCAGAAATAGCATTA TTTTATTTTGCATTT TERM 1756 1926150 - 1926190 + r 71 -4.9 -4.6313 | opp_overlap 1926144 1926149 1926147, overlap 1926144 1926147 1926152 TGTAATAAATAGTAC TACTATTTCTGAATGTTGT TTT AAAATACTCAGAAATAGCA TTATTTTATTTTGCA TERM 1757 1926539 - 1926556 + r 100 -8.4 -5.76949 | opp_overlap 1926552 CTTTCAAGCTACTTC GACGGG GTAAAA CCCGTC TTTTTTTTGGCAATC TERM 1758 1926756 - 1926736 - R 73 -6.9 -4.05033 | opp_overlap 1926736 TGGATTTTATAGAAA GGTTTGG TGGTGAG CCAAACC TTTTTTTTTGCACTG TERM 1759 1926736 - 1926756 + r 100 -7.6 -6.09133 | opp_overlap 1926736 TGGATTTTATAGAAA GGTTTGGT GGTGA GCCAAACC TTTTTTTTTGCACTG Ava_1564 1931703 - 1927051 - | multi-sensor hybrid histidine kinase TERM 1760 1930444 - 1930432 - G 72 -7.7 -3.75015 | opp_overlap 1930441, overlap 1930421 1930440 ACAAGCTTGATTAAA GCGAA CGA TTCGC CCTTGGGAATCTAGG Ava_1565 1932156 - 1931740 - | putative anti-sigma regulatory factor (Ser/Thr protein kinase) Ava_1566 1932306 - 1933496 + | response regulator receiver (CheY) modulated Serine phosphatase Ava_1567 1933859 - 1933521 - | anti-sigma-factor antagonist domain-containing protein Ava_1568 1936587 - 1934590 - | cellulose synthase catalytic subunit Ava_1569 1939462 - 1936643 - | hypothetical protein Ava_1570 1941188 - 1939704 - | hypothetical protein TERM 1761 1940768 - 1940752 - G 72 -7.9 -3.77196 | CTAGCACTTACCAAA GCAGCGA TCG CCGCCGC CTGATCCCACATAGT Ava_1571 1942569 - 1941268 - | hypothetical protein Ava_1572 1943251 - 1944042 + | Short-chain dehydrogenase/reductase SDR TERM 1762 1944117 - 1944069 - T 75 -9.2 -3.2218 | gap 1, opp_overlap 1944076, overlap 1944076 GTCAATAGTCATTAA TAGTTAAGTGTTGAGTTGAAAAT TATT ACTTCCAACCCAACACTTC-CTA ATTTTCTTGAGACTT TERM 1763 1944111 - 1944076 - T 90 -12.8 -3.20348 | opp_overlap 1944076, overlap 1944069 GTCATTAATAGTTAA GTGTTGAGTTGAAAAT TATT ACTTCCAACCCAACAC TTCCTAATTTTCTTG Ava_1573 1944700 - 1944149 - | hypothetical protein TERM 1764 1944892 - 1944864 - R 100 -8.3 -5.28778 | opp_overlap 1944864 ATTAGTTATAAAAAA TCGGACATTAA CAAAAAT TTAATGCCCGA TTTATCACTTCAATT hemH 1946140 - 1944974 - | ferrochelatase Ava_1575 1946234 - 1946857 + | UbiE/COQ5 methyltransferase TERM 1765 1947081 - 1947119 + G 83 -11.2 -3.48063 | ATTTCCTGCTTTAAT TTTTGAGCTTGTTGATGA CCG TCCTGAACAAGCTCAGAA TTATCGATTTGAGTC Ava_1576 1947028 - 1947864 + | hypothetical protein Ava_1577 1949405 - 1948005 - | amidohydrolase Ava_1578 1949489 - 1950283 + | isochorismatase hydrolase TERM 1766 1950615 - 1950595 - g 82 -6.9 -4.88407 | CCATTTAATCAAAAA TACAGGC TCTAGTC GCCTGTA CACATTAACAATTAT Ava_1579 1950284 - 1950739 + | TonB box-like TERM 1767 1950963 - 1950989 + F 100 -13.8 -4.17701 | TTTGAATTGGTATTA TCCCTGGCTTCT CCA AGAAGTCGGGGA TTTATAGTTTGTGAG Ava_1580 1951222 - 1951980 + | hypothetical protein Ava_1581 1952089 - 1953786 + | FAD dependent oxidoreductase Ava_1582 1953910 - 1954272 + | ArsR family transcriptional regulator TERM 1768 1954319 - 1954300 - T 100 -12.2 -4.69214 | opp_overlap 1954300 CATCTAATAAATAAA GCACCCTA AAAT TAGGGTGC TATCTACTAAGCAGT TERM 1769 1954300 - 1954319 + T 85 -12.2 -2.94218 | opp_overlap 1954300 CATCTAATAAATAAA GCACCCTA AAAT TAGGGTGC TATCTACTAAGCAGT Ava_1583 1955431 - 1954349 - | photosystem II reaction centre protein PsbA/D1 TERM 1770 1954972 - 1954954 - G 72 -7.4 -3.92522 | overlap 1954955 1954963 GCCCAATGGGATAAA TCAACAGC ACG GCTGTTGC GGCCGCAACGGGAGC TERM 1771 1954971 - 1954955 - G 79 -10.9 -2.95192 | overlap 1954954 1954963 CCCAATGGGATAAAT CAACAGC ACG GCTGTTG CGGCCGCAACGGGAG Ava_1584 1955630 - 1956757 + | 2-nitropropane dioxygenase, NPD TERM 1772 1956827 - 1956799 - f 76 -4.8 -4.92812 | gap 1, opp_overlap 1956799 1956810 TCAGAAGAAAAGAAA TTTAAAGAGT-TG GTAT CATACCCTTTAAA TTTATTAATTATTGA TERM 1773 1957496 - 1957482 - g 79 -8.6 -4.19735 | TTTGCGAAAAGCAAA TCTGCA AGG TGCAGA CTTAACAGGAGCAAT Ava_1585 1956856 - 1957569 + | pentapeptide repeat-containing protein obgE 1958731 - 1957703 - | GTPase ObgE Ava_1587 1959623 - 1958949 - | Mo-dependent nitrogenase-like Ava_1588 1960308 - 1959724 - | hypothetical protein TERM 1774 1960364 - 1960353 - H 71 -4.4 -4.7373 | overlap 1960361 GTAGTTTATGAAAAA CTCA TAAT TGAG GACGCTGCTCATCGC Ava_1589 1960525 - 1961853 + | hypothetical protein TERM 1775 1962850 - 1962840 - g 71 -4.6 -4.58395 | TGCATCCGGCAAAAA CGAC TTT GCCG AAGCAGTCCGCACCG Ava_1590 1961920 - 1963002 + | fructose-bisphosphate aldolase TERM 1776 1963079 - 1963113 + T 73 -8.6 -3.29461 | GGTTTAGGGGTTTAG GGGTGTAGGGGTTTTA AAT TGACAGCCCTACACTC TTGTCCAAACCCTTG TERM 1777 1963180 - 1963226 + T 100 -17.5 -4.08767 | opp_overlap 1963185 1963187 TGTCCATAGTCTATA GTCAAGAGTCCAGAGTCAAAG GCTAG CTTGGACTCTGGACTTTGGAC TTTTGACAACCTGAG TERM 1778 1963221 - 1963185 - T 87 -12.4 -3.13177 | opp_overlap 1963180, overlap 1963187 ATAGTCTATAGTCAA GAGTCCAGAGTCAAAG GCTAG CTTGGACTCTGGACTT TGGACTTTTGACAAC TERM 1779 1963219 - 1963187 - T 100 -15 -3.12505 | opp_overlap 1963180, overlap 1963185 AGTCTATAGTCAAGA GTCCAGAGTCAAAG GCTAG CTTGGACTCTGGAC TTTGGACTTTTGACA Ava_1591 1964511 - 1963273 - | TPR repeat-containing protein Ava_1592 1966343 - 1964625 - | Serine/threonine protein kinase TERM 1780 1964889 - 1964906 + g 95 -7.7 -5.18726 | TCTAATTTGTTTTTT CTGGTTG TATT CAGCCAG TTTTTGTTGTACCAA TERM 1781 1966459 - 1966490 + r 90 -8.8 -4.38472 | opp_overlap 1966468, overlap 1966455 ACTGCGTATGTCATT TTTTAGAGACGCGA TTAA TCGCGTCTGTACAA TTGTTTTAGTTTCCC Ava_1593 1969112 - 1966536 - | metallophosphoesterase TERM 1782 1967497 - 1967514 + g 73 -5.5 -4.66987 | CAAACAACCACAATA GCGCGTG AACC CATGTGC TTTTCTTCGCATATA Ava_1594 1970557 - 1969172 - | hypothetical protein Ava_1595 1971102 - 1970686 - | hypothetical protein Ava_1596 1971160 - 1971738 + | TetR family transcriptional regulator TERM 1783 1971836 - 1971857 + T 77 -2.8 -5.5074 | opp_overlap 1971836 CTCCAAAGCAAAAAA GCGCCCCC GGTTAA GGAGACGC TTTTTTGTTGAGTTA TERM 1784 1971857 - 1971836 - T 95 -7.2 -5.37593 | opp_overlap 1971836 CTCCAAAGCAAAAAA GCGCCCCC GGTTAA GGAGACGC TTTTTTGTTGAGTTA Ava_1597 1972966 - 1971884 - | photosystem II reaction centre protein PsbA/D1 TERM 1785 1973042 - 1973080 + H 87 -12.1 -3.18383 | AACAGTAATTATTTC GTTTTGTAAAGTGTTTT GAGAA AAAAAACTTTACAAAAC TTGGTCACTAACGCT cofG 1973194 - 1974216 + | FO synthase subunit 1 Ava_1599 1975063 - 1974218 - | hypothetical protein TERM 1786 1975153 - 1975170 + r 84 -11.3 -3.62046 | opp_overlap 1975143 1975142 1975155, overlap 1975142 TAAACCGTCTGTAGA GACGCGA TTTA TCGCGTC TTCTTCACCCAATGA Ava_1600 1976113 - 1975316 - | ABC transporter-like TERM 1787 1975811 - 1975837 + g 72 -9.5 -3.18264 | overlap 1975802 GTCAATTTGGCTACG TTGGGGAACGT AAGCA ACTTTCCCCAA TTGCTGCATCAGGGG Ava_1601 1976206 - 1977183 + | periplasmic solute binding protein Ava_1602 1977366 - 1977716 + | hypothetical protein TERM 1788 1977773 - 1977743 - T 100 -15.6 -2.85999 | opp_overlap 1977747, overlap 1977745 1977747 TTATCTTAGATGATA GATACCCGACTTTT TAA AAACGTCGGGTATC TGAACACACTATAAA TERM 1789 1977771 - 1977745 - T 85 -12.4 -2.97925 | opp_overlap 1977747, overlap 1977743 1977747 ATCTTAGATGATAGA TACCCGACTTTT TAA AAACGTCGGGTA TCTGAACACACTATA TERM 1790 1977769 - 1977747 - T 78 -10.6 -3.04269 | opp_overlap 1977747, overlap 1977745 1977743 CTTAGATGATAGATA CCCGACTTTT TAA AAACGTCGGG TATCTGAACACACTA TERM 1791 1977747 - 1977769 + T 77 -10.6 -2.87344 | opp_overlap 1977747 1977745 1977743 CTTAGATGATAGATA CCCGACTTTT TAA AAACGTCGGG TATCTGAACACACTA TERM 1792 1977822 - 1977846 + T 100 -15.7 -3.14468 | opp_overlap 1977823 ATGACCTCTCCCCAA ACCCCTCTCCG ACG CGGAGAGGGGC TTAAATATCCTGAAA TERM 1793 1977845 - 1977823 - T 100 -19.2 -3.53444 | opp_overlap 1977822 TGACCTCTCCCCAAA CCCCTCTCCG ACG CGGAGAGGGG CTTAAATATCCTGAA TERM 1794 1977889 - 1977911 + T 100 -14.2 -3.5394 | ATTAGAGTTTTGAAG CCTCTCTCCT TGC AGGGGAGAGG TTTGGAGAGGGGTTT TERM 1795 1978016 - 1977999 - T 84 -11.3 -3.61398 | TCCTTGGGTGAAGAA GACGCGA TTCA TCGCGTC CCTACAAATGGTTTA Ava_1603 1980693 - 1978060 - | DNA polymerase III subunit alpha TERM 1796 1978433 - 1978452 + g 71 -2.2 -5.16071 | TTCTTGACACCATTT TTTGTTGA ACCA TCGATAAA TTTTTCTTGCTGCTT TERM 1797 1978944 - 1978958 + g 73 -2.9 -5.1101 | AGCCGTGTTTTTCTT CAATT AAATC AATTG TTTTTTGAATCATCG TERM 1798 1980584 - 1980612 + g 79 -11.1 -3.18582 | opp_overlap 1980584, overlap 1980571 CCGTGATCGGTAACA GCGATCGCTTT CATACCC AAGGCGATCGC TTGATCAATCAACTC TERM 1799 1980722 - 1980732 + H 73 -6.8 -4.30719 | opp_overlap 1980721 CCCTAGCCCACAATC TCCC CCT GGGA TTTCTTGTGAACCAG TERM 1800 1982139 - 1982126 - g 74 -6.7 -4.3129 | opp_overlap 1982126 GATTTAGTAGGAAAA GTTCC CCCC GGAAC TAGTTGGCAAGCAAC Ava_1604 1981094 - 1982662 + | transposase IS4 TERM 1801 1982782 - 1982804 + F 100 -19.2 -3.53761 | overlap 1982770 AATCAGGGTTTTAAG CCTCTCCCCG CGT CGGGGAGAGG TTTGGAGAGGGGTTC Ava_1605 1982993 - 1984063 + | hypothetical protein Ava_1606 1984624 - 1984196 - | hypothetical protein Ava_1607 1985898 - 1984735 - | hypothetical protein Ava_1608 1987199 - 1986024 - | hypothetical protein TERM 1802 1990682 - 1990664 - g 71 -6.8 -4.22883 | CATCATGGAAAAGAA GATGTTAT TAC ACAACATC AAAAAGCTTACCAAG TERM 1803 1991758 - 1991738 - g 72 -7.7 -3.88182 | TTAATGAAAAATGAA TATGCCATT GCT AATGACATA GCAGAAGAATATGAA Ava_1609 1987529 - 1991788 + | AMP-dependent synthetase and ligase TERM 1804 1994030 - 1993983 - g 83 -11.4 -2.95942 | opp_overlap 1993983, overlap 1993980 1994001 GGGACACCCAAAGGA GTTGTTGTTGACCACAAAGCAG TGAA CCGCTTGGTGATCAACACAAAC TATATCAACATCAAA Ava_1610 1991901 - 1995329 + | amino acid adenylation TERM 1805 1999053 - 1999019 - g 76 -10.8 -2.62616 | GGATTGGGGATAGTA TCAGTTGTGGATTTGC AGC ACTTATCCACAACTGA AAAGGAAATTGCCAC TERM 1806 1999558 - 1999569 + G 70 -5.8 -4.33675 | TACTTTGTTTATGAC GCTG TTGG CAGC TTTTGATACTCTGCT TERM 1807 1999707 - 1999719 + G 77 -4.7 -4.92314 | TGCGTGCTAATTTGG CAGGG AAT CCCAG TTTTTGTGAGTTGCT Ava_1611 1995332 - 2005258 + | amino acid adenylation TERM 1808 2006176 - 2006154 - g 88 -9.8 -4.07678 | TTTGAAAAGATTAAA GGACGCAATC AGC GATCGCGACC ACATTTGTGCAATCA TERM 1809 2007317 - 2007328 + G 71 -2.2 -5.08824 | AGTATGTAGCTGCAA CCTT AGCA GAGG TTTTTTCCCTAGAAG TERM 1810 2009406 - 2009390 - g 70 -5.1 -4.49344 | AAATTGAGCAGAAAA TTGCCGA TAT TTGGCAA GAATCATTGGGAATT Ava_1612 2005366 - 2009640 + | Beta-ketoacyl synthase TERM 1811 2010218 - 2010199 - g 95 -9.4 -4.56775 | ATTGCTTGCCAAAAA TTAGCTTC CCAA GAAGCTAA TCACCCCTTTGACCT TERM 1812 2017334 - 2017354 + G 74 -10.5 -2.71003 | opp_overlap 2017321, overlap 2017333 AGGAGCAATTACGGG CAATTCCTC ATC GGGGAATTG GTTATGGTATATTGC TERM 1813 2018232 - 2018242 + G 75 -5.4 -4.78149 | GAGTACACCTCTCAT CTTC CAG GAAG TTTTTGCGTTATACA TERM 1814 2019880 - 2019862 - g 74 -9.6 -3.34947 | opp_overlap 2019862, overlap 2019853 GAAGAACTGCGACAA TTTGCCCC AGA GGAGCAAA TAACTTATGTCGTGG Ava_1613 2009692 - 2020188 + | non-ribosomal peptide synthase TERM 1815 2020251 - 2020275 + F 84 -9.9 -3.77831 | opp_overlap 2020240 2020252, overlap 2020252 GAAACCCCTCTCCAA ACCTCTCCCCG AAG CGGAGAGAGGC TTTGAATCTTGCTCC TERM 1816 2020252 - 2020274 + F 90 -13.4 -2.86217 | opp_overlap 2020240 2020252, overlap 2020251 AAACCCCTCTCCAAA CCTCTCCCCG AAG CGGAGAGAGG CTTTGAATCTTGCTC TERM 1817 2020274 - 2020252 - f 100 -15.6 -3.5394 | opp_overlap 2020252 2020251, overlap 2020240 AAACCCCTCTCCAAA CCTCTCCCCG AAG CGGAGAGAGG CTTTGAATCTTGCTC TERM 1818 2020400 - 2020367 - f 73 -3.4 -5.17353 | gap 2, opp_overlap 2020370 2020370, overlap 2020370 2020371 ATATCTACTAAAAAA CAAC-TGGAAAC-GTA AATT TACTGTTTCCAAGTTA TCAACCAATATCACC TERM 1819 2020396 - 2020370 - f 73 -5.3 -4.67552 | gap 1, opp_overlap 2020370 2020370, overlap 2020367 2020371 TCTACTAAAAAACAA CTGGAAAC-GTA AATT TACTGTTTCCAA GTTATCAACCAATAT Ava_1614 2020454 - 2021251 + | hypothetical protein TERM 1820 2022233 - 2022244 + G 71 -4.4 -4.86001 | overlap 2022237 CGGTACTTGGGGCAT TGAC TTTA GTCA TTTTTATAGAATGAT Ava_1615 2021307 - 2022413 + | zinc-containing alcohol dehydrogenase superfamily protein TERM 1821 2022472 - 2022450 - f 100 -14.2 -3.53761 | GAACCCCTCTCCAAA CCTCTCCCCT GCA AGGAGAGAGG CTTCAAAACTCTAAT Ava_1616 2022581 - 2023525 + | pyrroline-5-carboxylate reductase Ava_1617 2023613 - 2025622 + | ABC transporter-like TERM 1822 2025972 - 2025985 + F 86 -4.5 -5.74122 | TTAATTTTCTATTAG TCCGT GTAG GCGGA TTTTTTTGTGTGGTG TERM 1823 2026544 - 2026494 - f 100 -13.6 -3.28712 | opp_overlap 2026498, overlap 2026498 TGTTTCTTGGCAGAA TAAATTGCTGAACATCCATACTAA AAT TTAGTAGAGATGATCAGCGATTTA AGATAACAACTTTAG TERM 1824 2026540 - 2026498 - f 86 -10 -4.30719 | opp_overlap 2026498, overlap 2026494 TCTTGGCAGAATAAA TTGCTGAACATCCATACTAA AAT TTAGTAGAGATGATCAGCGA TTTAAGATAACAACT TERM 1825 2026498 - 2026540 + F 80 -10 -3.60098 | opp_overlap 2026498 2026494 TCTTGGCAGAATAAA TTGCTGAACATCCATACTAA AAT TTAGTAGAGATGATCAGCGA TTTAAGATAACAACT TERM 1826 2026593 - 2026554 - f 85 -10.2 -3.97511 | opp_overlap 2026563, overlap 2026555 GATTTAAGATAACAA CTTTAGATACCCGACT GATTAGAA AGTCGGGTATCTAGAA AAAATTTTAAAAGCG TERM 1827 2026592 - 2026555 - f 83 -11.5 -2.97784 | opp_overlap 2026563, overlap 2026554 ATTTAAGATAACAAC TTTAGATACCCGACT GATTAGAA AGTCGGGTATCTAGA AAAAATTTTAAAAGC TERM 1828 2026652 - 2026663 + G 74 -4.4 -5.03314 | opp_overlap 2026648, overlap 2026649 2026648 TGTTTTATTAATCAC TCAC AGTG GTGA TTTTTTCACAATAGA Ava_1618 2026617 - 2027600 + | hypothetical protein Ava_1619 2027608 - 2028585 + | hypothetical protein TERM 1829 2028842 - 2028828 - g 71 -2.1 -5.16206 | AAATTAACAGAAAAA TCCAC TAGCT ATGGA ACGCGGAATGTATTT TERM 1830 2028993 - 2029014 + G 75 -5.9 -4.72986 | opp_overlap 2028993 2028996 GAATTAACTATAGGA CAATGGC ACTTTTTC GCCATTG TTTTTAATAGCGGTC Ava_1620 2028672 - 2030732 + | patatin Ava_1621 2030870 - 2031277 + | hypothetical protein TERM 1831 2031389 - 2031344 - f 74 -9.3 -3.08314 | opp_overlap 2031350, overlap 2031325 2031350 TTTAATCTCTAAAAG TAAAAATGGCCTCTGAG TTTGATCTAATT CTCAAAGGCCATTTTCA AATTACTAGTCTAAT TERM 1832 2031383 - 2031350 - f 83 -6.1 -5.0925 | opp_overlap 2031350, overlap 2031325 2031344 CTCTAAAAGTAAAAA TGGCCTCTGAG TTTGATCTAATT CTCAAAGGCCA TTTTCAAATTACTAG TERM 1833 2032242 - 2032230 - g 74 -4.8 -4.88388 | ATAATGTTATAAAAA CTGC TGAAC GCAG ATTGAATTGGGAGAG Ava_1622 2031428 - 2033263 + | ABC transporter-like TERM 1834 2033307 - 2033273 - f 82 -7.8 -4.4267 | overlap 2033277 2033278 TTGTAAAATTTAAAA TATACGTTTGGTGGGC ATT GCCCACCCTACAGATA ATAAGAATTTTTTAG TERM 1835 2033303 - 2033277 - f 75 -8.6 -3.47303 | overlap 2033273 2033278 AAAATTTAAAATATA CGTTTGGTGGGC ATT GCCCACCCTACA GATAATAAGAATTTT TERM 1836 2033302 - 2033278 - f 74 -9.9 -2.66755 | overlap 2033277 2033273 AAATTTAAAATATAC GTTTGGTGGGC ATT GCCCACCCTAC AGATAATAAGAATTT TERM 1837 2033598 - 2033627 + G 100 -9.5 -5.4756 | opp_overlap 2033607 TCAAATCATTGATTC CTTGGATAACTAT AAAG ATAGTTATCAAAG TTTTTTATTAAAATT TERM 1838 2034001 - 2033987 - g 82 -8.6 -4.34811 | AAGAAATAGCGAAAA TAGCTG AAA CAGCTA TGAATGTTGAAAACT TERM 1839 2034427 - 2034413 - g 73 -7.2 -4.13945 | ATTCCCATGCTAAAA TTGCTT CTG AAGCAA CAGTAGCAACTGAAC Ava_1623 2033335 - 2035023 + | GUN4-like Ava_1624 2038550 - 2035020 - | WD-40 repeat-containing protein TERM 1840 2038474 - 2038453 - G 80 -3.6 -5.28561 | overlap 2038454 AAGACATAACAAAAA TCACCAGC TTTGAG GCTGGCGT AGAGTTGTTTGTCCG TERM 1841 2038473 - 2038454 - G 70 -7.1 -3.74697 | overlap 2038453 AGACATAACAAAAAT CACCAGC TTTGAG GCTGGCG TAGAGTTGTTTGTCC TERM 1842 2038662 - 2038712 + r 82 -10.4 -3.55071 | opp_overlap 2038676 2038693 2038694, overlap 2038663 2038676 CGTTGATCCCCCCAA CCCCCCTTAAAAAGGGGGGAAATG AAT CAAAGTCCCCCTTTTTAAGGGAGA TTTAGGGGGATCTAA TERM 1843 2038663 - 2038711 + r 93 -13.9 -2.72829 | opp_overlap 2038676 2038693 2038694, overlap 2038662 2038676 GTTGATCCCCCCAAC CCCCCTTAAAAAGGGGGGAAATG AAT CAAAGTCCCCCTTTTTAAGGGAG ATTTAGGGGGATCTA TERM 1844 2038712 - 2038694 - R 74 -9.6 -3.01914 | opp_overlap 2038676 2038663 2038662, overlap 2038676 2038693 GGAAATGAATCAAAG TCCCCCTT TTT AAGGGAGA TTTAGGGGGATCTAA TERM 1845 2038867 - 2038809 - R 100 -14.7 -2.81509 | gap 2, opp_overlap 2038809 2038810 2038811 2038811 2038812 2038815 GAAAATATTTAAGTA TCTGTAGGGTGGGCATTGCCCACCGTATC ATG GTTTTGGTGGGCAATGCCCACCCTACT-- ACATATATTTCAGAA TERM 1846 2038811 - 2038838 + r 75 -9.2 -3.13504 | gap 1, opp_overlap 2038809, overlap 2038810 2038809 2038811 2038812 2038815 AAATATTTAAGTATC TG-TAGGGTGGGC ATT GCCCACCGTATCA TGGTTTTGGTGGGCA TERM 1847 2038811 - 2038869 + r 100 -21.3 -2.54504 | gap 2, opp_overlap 2038809, overlap 2038811 2038810 2038809 2038812 2038815 AAATATTTAAGTATC -T-GTAGGGTGGGCATTGCCCACCGTATC ATG GTTTTGGTGGGCAATGCCCACCCTACTAC ATATATTTCAGAAAT TERM 1848 2038815 - 2038833 + r 75 -10.2 -2.9244 | opp_overlap 2038809, overlap 2038811 2038810 2038809 2038811 2038812 ATTTAAGTATCTGTA GGGTGGGC ATT GCCCACCG TATCATGGTTTTGGT TERM 1849 2039207 - 2039169 - R 95 -11.4 -4.59982 | opp_overlap 2039167 2039198 TTATAATCAAAGAAA TATTCAAGTAGATTTA TTACTTT TAAATCCACTTGAATA GGTGATTTCATGAAG Ava_1625 2040615 - 2039215 - | hypothetical protein TERM 1850 2040563 - 2040579 + g 78 -9.5 -3.57523 | overlap 2040562 CGTTTTAGTCCCTTG GGAGTTA AGA TAACTCC TCTTCTTCTCTTCGT Ava_1626 2041782 - 2041378 - | response regulator receiver domain-containing protein TERM 1851 2041880 - 2041858 - R 100 -19.2 -3.53761 | opp_overlap 2041850 2041849 GAACCCCTCTCCAAA CCTCTCCCCG ACG CGGGGAGAGG CTTCAAAACCTTTAT TERM 1852 2042031 - 2042084 + r 74 -8.3 -3.67296 | gap 1, opp_overlap 2042030 2042036 2042037, overlap 2042032 TTATAAGGATAAAAG GATAATTG-GTAGATCCCCGACTTTT TTA AAAAGTCGGGGATCTGCACACTGAGA TTTACCTAACTAATC TERM 1853 2042032 - 2042083 + r 82 -11.8 -2.80056 | gap 1, opp_overlap 2042030 2042036 2042037, overlap 2042031 TATAAGGATAAAAGG ATAATTG-GTAGATCCCCGACTTTT TTA AAAAGTCGGGGATCTGCACACTGAG ATTTACCTAACTAAT TERM 1854 2042078 - 2042036 - R 100 -15 -3.73008 | opp_overlap 2042032 2042031, overlap 2042030 2042037 AGGATAAAAGGATAA TTGGTAGATCCCCGACTTTT TTA AAAAGTCGGGGATCTGCACA CTGAGATTTACCTAA TERM 1855 2042078 - 2042037 - R 100 -18.3 -2.8272 | gap 1, opp_overlap 2042032 2042031, overlap 2042036 2042030 GGATAAAAGGATAAT TG-GTAGATCCCCGACTTTT TTA AAAAGTCGGGGATCTGCACA CTGAGATTTACCTAA Ava_1627 2042471 - 2042094 - | response regulator receiver domain-containing protein Ava_1628 2045548 - 2042468 - | multi-sensor Signal transduction histidine kinase TERM 1856 2042521 - 2042507 - G 70 -2.8 -4.96468 | CAAAGTGAAATAAAA GGTG CTGCCTT CACC AAGGGTACTTTCTGC TERM 1857 2042666 - 2042683 + g 71 -9.1 -3.38361 | TGTTTCTAGTTTGTT GGCAGGG ATAC CTCTGCC TTGGTCTTGGACTTT TERM 1858 2044026 - 2044004 - G 71 -9.8 -2.61264 | opp_overlap 2044004 2044004, overlap 2044003 TTGGTTAGTGATAAC CGACGGTCGG TCG CAGACCATCG TCACTTCCTTGGCTG TERM 1859 2045370 - 2045346 - G 70 -5.8 -4.35044 | TTACTTAAATATAAA TGAATGCGAT CGCTC ATCTCATTCA TCAACTGATATGCCA Ava_1629 2047407 - 2045566 - | multi-component transcriptional regulator TERM 1860 2046657 - 2046668 + g 70 -5.8 -4.39092 | overlap 2046656 TGGTTTTATTTATGG CAGC AATT GCTG TTTGATTTTTGGTTT Ava_1630 2047966 - 2048631 + | hypothetical protein Ava_1631 2049878 - 2048634 - | MscS mechanosensitive ion channel TERM 1861 2050711 - 2050697 - H 83 -5.8 -5.17576 | opp_overlap 2050696 2050708 TAGCAACTCAAAAAA TTAAGT GGA ACTTAA AATTTAATATCTCAT TERM 1862 2050753 - 2050739 - H 71 -7.2 -3.90309 | opp_overlap 2050738 CATCACAAATAAACA TTCTCT TCT AGAGAA ATTACGTAAAATATA Ava_1632 2050979 - 2053150 + | Sodium/hydrogen exchanger Ava_1633 2053155 - 2053637 + | hypothetical protein Ava_1634 2053719 - 2054429 + | hypothetical protein TERM 1863 2054452 - 2054470 + F 83 -8.8 -4.22226 | opp_overlap 2054441 2054450 2054451, overlap 2054453 GAATGGGATACAAGC CCCGTCCT TAT AGGACGGC TTTAATTTGTGTTAT TERM 1864 2054453 - 2054469 + F 87 -12.3 -3.11709 | opp_overlap 2054450 2054451, overlap 2054452 AATGGGATACAAGCC CCGTCCT TAT AGGACGG CTTTAATTTGTGTTA Ava_1635 2054516 - 2055727 + | IS891/IS1136/IS1341 transposase TERM 1865 2055735 - 2055713 - f 93 -12 -3.83844 | TCTATGAATGAAGAA TCTTCGCCCT TAT AGGGCGGAGA GTGTCAACAATTAAG TERM 1866 2055801 - 2055845 + F 78 -10.4 -3.08869 | opp_overlap 2055807 2055837, overlap 2055807 2055835 TCTAAAAATATTGCG CTACAAGTATATTAAAAATT GTAAA AATTACTAATATACTTGTAG TATGTGGTTTCTACT Ava_1636 2055930 - 2058332 + | peptidase Ava_1637 2059912 - 2058737 - | permease YjgP/YjgQ Ava_1638 2060752 - 2060024 - | ABC transporter-like Ava_1639 2061278 - 2060781 - | hypothetical protein TERM 1867 2061541 - 2061512 - R 78 -3.7 -5.4251 | gap 1, opp_overlap 2061512 CGCACACATAAAAAA TTAGGGAA-GAAGA AGT TTTTCGTTCCCCAA ATTTTTATTACTATC Ava_1640 2061947 - 2061567 - | hypothetical protein TERM 1868 2061826 - 2061838 + g 79 -3.4 -5.37345 | opp_overlap 2061826 GCAATTTGTAAGATA CCTT GATAG AAGG TTTTTTCTGGTTCGC Ava_1641 2062321 - 2061956 - | ferredoxin thioredoxin reductase, beta chain TERM 1869 2062386 - 2062404 + r 75 -5.3 -4.87389 | gap 1, overlap 2062370 2062386 2062387 CTCAGTAGAGTATTG CT-GGGGA TTTT TCCCCAAG TTTATTTTTGGGATA Ava_1642 2063702 - 2062542 - | hypothetical protein Ava_1643 2063855 - 2064373 + | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase Ava_1644 2066403 - 2064595 - | HTTM TERM 1870 2066442 - 2066488 + r 79 -11.1 -2.93367 | gap 1, opp_overlap 2066442, overlap 2066432 2066453 GTTATTGGTCAGAGA CGCGATTAATCGCGTCTGT-AC AATT GTCAGAGATGGGATTAATCGCG TCTGTACAATTGTTA Ava_1645 2067495 - 2066554 - | hypothetical protein Ava_1646 2068967 - 2067504 - | membrane bound O-acyl transferase, MBOAT TERM 1871 2068482 - 2068496 + g 71 -3.4 -5.03715 | opp_overlap 2068482, overlap 2068483 ATTAACGTAATCTAA TGCGCC AAT GGCACG TTTTTTGCGGCTGGT TERM 1872 2069042 - 2069003 - R 76 -9.6 -3.30741 | opp_overlap 2069003, overlap 2068996 ATTGATAATTACTAA TTCGTAATTCGTAGTT GAGCCTGT AATTACGAATTACGAA TTACATAGGCGTTAG TERM 1873 2069003 - 2069042 + r 88 -12.5 -3.06831 | opp_overlap 2069003 2068996 ATTGATAATTACTAA TTCGTAATTCGTAGTTG AGCCTG TAATTACGAATTACGAA TTACATAGGCGTTAG Ava_1647 2069470 - 2069084 - | phosphopantetheine-binding Ava_1648 2071247 - 2069439 - | Acyl-CoA dehydrogenase TERM 1874 2069551 - 2069528 - GR 72 -7.5 -3.71745 | overlap 2069526 GAACGATGGAAAACA TCCGATTGT CGGTAT ACAACCGGA CTAACTCTTGGGCAA Ava_1649 2073066 - 2071258 - | AMP-dependent synthetase and ligase TERM 1875 2071983 - 2071997 + g 71 -4.2 -4.81212 | overlap 2071985 CTCCATCGTCCCAGG TAGTGG CTT CCACAA TTTTGTTCTGCTCAA Ava_1650 2073927 - 2073592 - | hypothetical protein Ava_1651 2074060 - 2075043 + | glycine cleavage T protein (aminomethyl transferase) TERM 1876 2075095 - 2075045 - T 74 -7.6 -3.98172 | opp_overlap 2075037, overlap 2075037 2075047 2075048 ATGAATACCCATAAA TAGGGGTTTAGGGGTGCAAATGTT TAA AACCCTTACACCCTTACACCCTCA TACCCTCACACCCTC TERM 1877 2075092 - 2075048 - T 81 -11.5 -2.7386 | opp_overlap 2075037, overlap 2075037 2075047 2075045 AATACCCATAAATAG GGGTTTAGGGGTGCAAATGTT TAA AACCCTTACACCCTTACACCC TCATACCCTCACACC Ava_1652 2075834 - 2075160 - | O-methyltransferase family protein Ava_1653 2076879 - 2076007 - | 5'-methylthioadenosine phosphorylase TERM 1878 2076454 - 2076439 - G 71 -9 -3.27704 | overlap 2076434 ATCTGGTAAATTTAA GGATGC GATC GCATCC GCTAAAACCCCAGCT Ava_1654 2077063 - 2077266 + | hypothetical protein TERM 1879 2077357 - 2077321 - f 95 -11.8 -4.49556 | gap 1, opp_overlap 2077332, overlap 2077322 2077324 GTTGCACCAAATAAA TGA-TGTAGAGACGTTG CATA CAACGTCTCTACAGTCC AAAATAAAGCAAATC TERM 1880 2077356 - 2077322 - f 100 -15.3 -3.29252 | gap 1, opp_overlap 2077332, overlap 2077321 2077324 TTGCACCAAATAAAT GA-TGTAGAGACGTTG CATA CAACGTCTCTACAGTC CAAAATAAAGCAAAT TERM 1881 2077353 - 2077324 - f 100 -18.1 -3.20639 | opp_overlap 2077332, overlap 2077322 2077321 GCACCAAATAAATGA TGTAGAGACGTTG CATA CAACGTCTCTACA GTCCAAAATAAAGCA TERM 1882 2079468 - 2079448 - g 95 -14.1 -2.83677 | opp_overlap 2079448, overlap 2079439 AACGAAGGCATTACA GTACGCATC ATC GATGCGTAC TCCGTTAAACCCATT TERM 1883 2079448 - 2079468 + G 93 -14.1 -2.52795 | opp_overlap 2079448 2079439 AACGAAGGCATTACA GTACGCATC ATC GATGCGTAC TCCGTTAAACCCATT Ava_1655 2077885 - 2079774 + | transketolase Ava_1656 2079891 - 2080736 + | hypothetical protein TERM 1884 2080806 - 2080788 - f 76 -10.2 -2.94293 | opp_overlap 2080785, overlap 2080785 TCTGGAATAGAATTA TGGTGGGC AAT GCCCACCT ACACATATTTTAAAA Ava_1657 2081102 - 2082037 + | hypothetical protein Ava_1658 2082176 - 2082721 + | hypothetical protein TERM 1885 2082753 - 2082776 + T 71 -8.9 -3.192 | opp_overlap 2082752, overlap 2082752 GACGTATTACCAGAC TCCTCATCC CCTTGT GGGTGAGGA ATTTTAACTTACTTT Ava_1659 2083943 - 2082936 - | glutathione S-transferase-like protein Ava_1660 2084635 - 2083955 - | hypothetical protein hrcA 2085747 - 2084650 - | heat-inducible transcription repressor TERM 1886 2084795 - 2084835 + g 74 -9.8 -3.16965 | gap 1, overlap 2084792 2084788 2084827 GAAATTAAGGAGCAG GTGCGTATCGGTTCTAGGG GGTT TTCT-GCGCCGATACGCAC TGTTACCTTGGATTT TERM 1887 2085034 - 2085046 + g 74 -6.3 -4.57837 | ACTGCGGTGGGCTAG TTCTG CTA CAGAA TTTTTCAGAAACTCT Ava_1662 2086523 - 2086164 - | rhodanese-like protein TERM 1888 2086643 - 2086608 - H 90 -12.6 -3.20227 | gap 1, overlap 2086611 GGGGAAGCAGGAAGA GAAGT-CGCAAGGAGGG TTT CCCTCCGGGCGAACTTC GGGGAAGCAGGGGGG TERM 1889 2086639 - 2086611 - H 78 -8.7 -3.73813 | overlap 2086608 GAAGCAGGAAGAGAA GTCGCAAGGAGGG TTT CCCTCCGGGCGAA CTTCGGGGAAGCAGG Ava_1663 2086734 - 2088389 + | hypothetical protein Ava_1664 2088705 - 2089298 + | hypothetical protein Ava_1665 2089332 - 2090375 + | KWG Ava_1666 2090424 - 2090618 + | hypothetical protein Ava_1667 2090746 - 2091234 + | hypothetical protein Ava_1668 2091352 - 2092113 + | Serine O-acetyltransferase TERM 1890 2092232 - 2092220 - T 70 -3.3 -4.98531 | overlap 2092222 GTCCTAAATTAAAAA TAGCC TAT GGCAA GGCTGCGCCAACAAG Ava_1669 2092940 - 2092356 - | pyridoxamine 5'-phosphate oxidase-related, FMN-binding Ava_1670 2093335 - 2095632 + | RP ribonucleotide reductase-like TERM 1891 2095675 - 2095647 - f 79 -10.5 -3.12505 | opp_overlap 2095647, overlap 2095652 2095654 ATTCCAGAGTCAATA GTCAATAGTCA ACAGTAA TGACTATTGAC TTCTCTGAAAACCTA TERM 1892 2095647 - 2095675 + F 82 -10.5 -3.48593 | opp_overlap 2095647 2095652 2095654 ATTCCAGAGTCAATA GTCAATAGTCA ACAGTAA TGACTATTGAC TTCTCTGAAAACCTA Ava_1671 2095759 - 2095977 + | hypothetical protein TERM 1893 2096979 - 2096994 + G 71 -4.8 -4.58395 | CTACAGTGTGCGGGG GTTAAA TAAC TTTAAC TTTTTAGCCAATCAA TERM 1894 2098542 - 2098559 + G 71 -9.1 -3.33969 | CGGTGGTATTTTTGC CCGTGCA GAAT TGCGCGG TTATGGAATAACTTA Ava_1672 2096227 - 2098788 + | TonB-dependent receptor TERM 1895 2098801 - 2098830 + F 73 -6.4 -4.29656 | overlap 2098802 TAATCTTGATTTTGG AGGCGACAGTAA ACATTA TTTCTGTCGCCA TTTTGCCCTTTTCTA TERM 1896 2098802 - 2098829 + F 77 -9.9 -3.16709 | overlap 2098801 AATCTTGATTTTGGA GGCGACAGTAA ACATTA TTTCTGTCGCC ATTTTGCCCTTTTCT Ava_1673 2098855 - 2100045 + | major facilitator transporter TERM 1897 2100096 - 2100125 + F 100 -13.8 -2.8507 | opp_overlap 2100104, overlap 2100091 TGCTTGATTCTGAAC TGTAGAGACGTT GCATGA AACGTCTCTACA TCATTGATTGGGTGC Ava_1674 2100330 - 2101772 + | cytochrome bd ubiquinol oxidase, subunit I Ava_1675 2102011 - 2103024 + | cytochrome bd ubiquinol oxidase, subunit II Ava_1677 2103684 - 2104184 + | hypothetical protein Ava_1678 2104388 - 2105110 + | TPR repeat-containing protein TERM 1898 2105192 - 2105154 - f 70 -8.3 -3.38208 | opp_overlap 2105158 2105161, overlap 2105151 2105158 CAAAAGTAAAAAGCA CAAAGTG-GACGGTGTCGG TTT CCGTCAC-GTCTCACTTTA CAAGGAGGAAAAAAT TERM 1899 2105188 - 2105158 - f 75 -6.9 -4.27774 | opp_overlap 2105158 2105161, overlap 2105154 2105151 AGTAAAAAGCACAAA GTG-GACGGTGTCGG TTT CCGTCAC-GTCTCAC TTTACAAGGAGGAAA Ava_1679 2105883 - 2106167 + | RNA-binding region RNP-1 TERM 1900 2106491 - 2106534 + F 70 -3.4 -4.90778 | gap 2, opp_overlap 2106491 AAATTCAATAATAAA TCCGACTAGT-GG-TGATTT CCCCAA AAATTATCCTACTAGCCGGA TTTTCTTTACCTCCG TERM 1901 2106986 - 2106966 - f 78 -9 -3.68024 | opp_overlap 2106977 CTTTCTAAGATAGAA GCAGCAAC TATGT GTTGCCGC GCAAACTTGATCCAA TERM 1902 2107590 - 2107604 + G 75 -8.6 -3.89822 | ACATTTTATATGGGC CTAGCA CGA TGCTAG TTTATACAATGGGTA Ava_1680 2107031 - 2108080 + | fructose-1,6-bisphosphatase Ava_1681 2108287 - 2109432 + | transaldolase TERM 1903 2109626 - 2109595 - g 71 -6.7 -4.07885 | gap 1, overlap 2109623 TAGTCTCCTGGAAAA TCCCTTGCGCGTTG GTCTG CAACA-ACAAGGGA TGCCCGAACCCCAAA TERM 1904 2110567 - 2110594 + G 82 -7 -4.8622 | AGTTGATCCCAATTC CTCCACACCTAC TTAT GTAGGTATGAAG TTTTTAGTTGACAAC Ava_1682 2109575 - 2111104 + | glucose-6-phosphate 1-dehydrogenase TERM 1905 2111869 - 2111884 + G 75 -10.4 -2.89824 | opp_overlap 2111867, overlap 2111868 CATTGGAAAGAATTG GCGGGA TGAT TCCCGC ATTGTTGATTGGTGG Ava_1683 2111262 - 2112638 + | OpcA TERM 1906 2112727 - 2112702 - f 100 -14.1 -3.90588 | opp_overlap 2112702 TATGGCTGAATTAAA CCCCGGTTTCT TCAA AAAAACCGGGG TTTTGAGTTGAAAAT TERM 1907 2112702 - 2112727 + F 93 -11.9 -4.27584 | opp_overlap 2112702 TATGGCTGAATTAAA CCCCGGTTTCT TCAA AAAAACCGGGG TTTTGAGTTGAAAAT Ava_1684 2112928 - 2113989 + | hypothetical protein TERM 1908 2114174 - 2114141 - T 95 -12.5 -3.95148 | opp_overlap 2114145, overlap 2114145 ACACACTGAATTAAA TGAACCCCGGTTTTC TTAA GAAAACCGGGGTTTT AAATTTAAGCTGGGT TERM 1909 2114145 - 2114170 + T 100 -17.7 -4.35926 | opp_overlap 2114141 2114145 ACTGAATTAAATGAA CCCCGGTTTTC TTAA GAAAACCGGGG TTTTAAATTTAAGCT TERM 1910 2114170 - 2114145 - T 100 -17.7 -3.6187 | opp_overlap 2114145, overlap 2114141 ACTGAATTAAATGAA CCCCGGTTTTC TTAA GAAAACCGGGG TTTTAAATTTAAGCT Ava_1685 2115448 - 2114192 - | hypothetical protein Ava_1686 2116023 - 2115637 - | hypothetical protein Ava_1687 2116939 - 2116148 - | hypothetical protein TERM 1911 2117409 - 2117420 + G 71 -2.2 -5.14985 | CCTTATGTTTAATCG GTGG TGTG CTAC TTTTTCTATCTTTAG Ava_1688 2117321 - 2117626 + | hypothetical protein Ava_1689 2118288 - 2119109 + | signal peptide peptidase A Ava_1690 2119222 - 2119635 + | chorismate mutase Ava_1691 2120444 - 2119674 - | Short-chain dehydrogenase/reductase SDR TERM 1912 2120294 - 2120308 + g 73 -8.6 -3.69618 | overlap 2120292 TTTCAGCATTCCGTC CAGTGA TTA TCACTG TATTTTGCGCTTGCA Ava_1692 2121111 - 2120521 - | cyclic nucleotide-binding protein Ava_1693 2122049 - 2121129 - | Fatty acid desaturase TERM 1913 2121632 - 2121621 - G 81 -4.4 -5.27335 | CCTTTGAAAGAAAAA TACC TCAT GGTA CAAAAACCGCACAGC TERM 1914 2121649 - 2121639 - G 74 -4.6 -4.85599 | CTCATGGTACAAAAA CCGC ACA GCGA TTAACCACAGTGGCC TERM 1915 2122391 - 2122373 - H 83 -8.8 -4.20516 | TTTTGATGTAAGAAA CCTCCTCC ACG GGAGGATG GAACCCAGATTAGTG TERM 1916 2122608 - 2122572 - g 91 -7.9 -4.83615 | TACGCCGGACAAAAA TCGTCGCTACAATTGGC CCT GCCACTAGTAGCCCCGA AATGCTGAAAGCCAT Ava_1694 2122538 - 2124307 + | pyruvate kinase TERM 1917 2124430 - 2124403 - T 100 -15.8 -3.90922 | opp_overlap 2124410 AGTTGCGCCAAATAA GTAGAGACGTTT CATG AAACGTCTCTAC AGTAAAGAATAAAGT TERM 1918 2124632 - 2124586 - T 72 -8 -3.64716 | opp_overlap 2124592 2124596 2124597, overlap 2124584 2124591 2124594 TGATTTTTGAAAATA TTTAAGTATCTGTAGGGTGGGC AAT GCCCACCCTACGTATATTTCAG AAATCAAATACTAGT TERM 1919 2124627 - 2124591 - T 87 -12.3 -3.28785 | opp_overlap 2124592 2124596 2124597, overlap 2124586 2124584 2124594 TTTGAAAATATTTAA GTATCTGTAGGGTGGGC AAT GCCCACCCTACGTATAT TTCAGAAATCAAATA TERM 1920 2124592 - 2124626 + T 100 -18 -3.55563 | opp_overlap 2124591 2124586 2124584 2124594, overlap 2124596 2124597 TTGAAAATATTTAAG TATCTGTAGGGTGGGC AAT GCCCACCCTACGTATA TTTCAGAAATCAAAT TERM 1921 2124624 - 2124594 - T 100 -14 -2.81509 | opp_overlap 2124592 2124596 2124597, overlap 2124591 2124586 2124584 GAAAATATTTAAGTA TCTGTAGGGTGGGC AAT GCCCACCCTACGTA TATTTCAGAAATCAA TERM 1922 2124596 - 2124622 + T 100 -18.8 -3.24708 | opp_overlap 2124594 2124591 2124586 2124584, overlap 2124592 2124597 AAATATTTAAGTATC TGTAGGGTGGGC AAT GCCCACCCTACG TATATTTCAGAAATC TERM 1923 2124597 - 2124621 + T 100 -20.1 -2.54504 | opp_overlap 2124594 2124591 2124586 2124584, overlap 2124596 2124592 AATATTTAAGTATCT GTAGGGTGGGC AAT GCCCACCCTAC GTATATTTCAGAAAT Ava_1695 2125701 - 2125003 - | peptidase M23B Ava_1696 2126257 - 2126643 + | hypothetical protein Ava_1697 2127301 - 2126720 - | hypothetical protein TERM 1924 2127116 - 2127104 - G 70 -2.7 -4.99035 | opp_overlap 2127105 2127106 2127108, overlap 2127105 2127106 GCAGCCATACAAAAA TCTAG CGC CTAAA GGTGCTAATATTTCC Ava_1698 2127549 - 2127304 - | hypothetical protein Ava_1699 2129009 - 2127750 - | hypothetical protein TERM 1925 2128721 - 2128707 - G 73 -2.8 -5.23316 | GACTACAGGAAAAAA CTGG TCACCTC CCAG GAAAATAACTACGCC TERM 1926 2129093 - 2129129 + r 100 -14.6 -3.25515 | overlap 2129091 GTCTACACGTAGTAT CGGTTGGAGTTGGG TATTTAAAC CCCAACTCCAACTG TCTTGAATTTTGAAT Ava_1700 2130740 - 2129250 - | Serine/threonine protein kinase TERM 1927 2129961 - 2129987 + g 78 -8.7 -3.89524 | TCTAGCGGTGGCATA GCGATCGCGTG GATGG TAGGCGATCGC TTTATCCAGTACACT Ava_1701 2131389 - 2130844 - | hypothetical protein Ava_1702 2132803 - 2131538 - | glutamate-5-semialdehyde dehydrogenase TERM 1928 2132742 - 2132766 + g 90 -13 -2.52543 | opp_overlap 2132748, overlap 2132737 2132748 AACTTCAGGGACGCT TGAAAAGCGC GTTTG GCGCTTTTCA TAGGTTCGGGACAAT TERM 1929 2132748 - 2132760 + g 72 -6.2 -4.30978 | opp_overlap 2132748, overlap 2132737 2132742 AGGGACGCTTGAAAA GCGC GTTTG GCGC TTTTCATAGGTTCGG Ava_1703 2133215 - 2132808 - | hypothetical protein TERM 1930 2134124 - 2134158 + r 73 -8.6 -3.29461 | opp_overlap 2134124 GGTGTAAGGGTATAA GGGTGTAGGGGTTTTA AAT TGACAGCCCTACACTC TTGTCCAAACCCTTG ribH 2134779 - 2134207 - | riboflavin synthase subunit beta Ava_1705 2135163 - 2134975 - | photosystem II reaction center protein Z TERM 1931 2135223 - 2135238 + H 74 -4.6 -4.9445 | AATAGAATATCGTAA CTGGCG ACAC CGACAG TTTTTCCTTAATTGT TERM 1932 2136050 - 2136028 - g 70 -7.1 -3.79747 | gap 1, opp_overlap 2136024, overlap 2136029 GGACTCACTATCAAA GC-GAAAGCA TTGT TGCTTTCAGC ATTAAAGAAATCAAG TERM 1933 2137014 - 2136980 - g 71 -3.1 -4.95155 | gap 2 TTTAGATTATAAAAA CTTTCTCTGGCATATTG CGC CAACA-G-CAAAGAAAG AAGCAATTATTCAAC TERM 1934 2137227 - 2137207 - g 93 -12.7 -3.11922 | opp_overlap 2137206 2137205, overlap 2137204 2137205 CAGCAGCGAAAATGA TTTCAGCAC GCG GTGCTGAAA AATTAGTAATTCAAT TERM 1935 2137900 - 2137915 + G 82 -3.3 -5.52023 | TGCCATATTTATTCA TGTCT ATCTTG AGACA TTTTTTATTAATGCT Ava_1706 2135694 - 2138372 + | hypothetical protein TERM 1936 2138401 - 2138418 + T 73 -6.3 -4.5032 | TTGAAATTTATGTTT GGCTAAA TATG TTTGGCC TTTATTATTCATCTG Ava_1707 2138875 - 2138618 - | hypothetical protein Ava_1708 2139221 - 2141935 + | phosphoesterase, RecJ-like Ava_1709 2145249 - 2142223 - | exonuclease SbcC TERM 1937 2144624 - 2144634 + g 79 -8.2 -4.07678 | TCCGCTTCTAATTCT GCCC GTT GGGC TTTGGTGTTTTCCCG Ava_1710 2145895 - 2146338 + | hypothetical protein TERM 1938 2146940 - 2146927 - g 70 -3.8 -4.74706 | TTCAAGAGTTAAAAA TGGC GAGATT GCCA CTGACTCCATCTTTG Ava_1711 2146599 - 2147234 + | hypothetical protein TERM 1939 2147470 - 2147457 - g 71 -6.7 -4.21737 | ATCAAAACAATCAAA CTCTG GAAT CAGAG ATGAAAATATCCCAG Ava_1712 2147224 - 2147628 + | hypothetical protein Ava_1713 2148184 - 2147768 - | hypothetical protein Ava_1714 2149753 - 2148275 - | ATPase TERM 1940 2148758 - 2148790 + g 95 -12.9 -3.17688 | opp_overlap 2148757 2148760 AGTGGTATCCAAAGC CATACGTTCACATTG GGC TAGTGTGAGCGTATG TTCATGCAGTCGTTC Ava_1715 2152470 - 2149753 - | integrase catalytic subunit TERM 1941 2150268 - 2150280 + g 70 -7.7 -3.68265 | TGACTTTTATTCCCT GTCCA GGC TGGAC TTTAGCGTTGCCTTT TERM 1942 2154679 - 2154655 - g 100 -11.5 -4.7497 | TCCAGTTATTAAAAA TTGTTGCCACC CTG GCTGGCAACAA CTCGAATTGAAAGAA Ava_1716 2152803 - 2154689 + | PAS/PAC sensor hybrid histidine kinase TERM 1943 2154739 - 2154714 - f 73 -6.2 -4.4773 | opp_overlap 2154714 GCAGAGGAATTAAAA TTCCTCACCC ACAAAG GGATGAGAAA TCTGGTAATGGGTAA TERM 1944 2154743 - 2154774 + F 79 -10.4 -3.1577 | opp_overlap 2154741, overlap 2154742 2154751 AGGGATGAGAAATCT GGTAATGGGTAATA GTCC TATTACTTATTACC TATTACCTATTACCT Ava_1717 2154860 - 2155555 + | hypothetical protein Ava_1718 2155891 - 2157135 + | S-layer region-like Ava_1719 2158548 - 2157184 - | histidine kinase TERM 1945 2158218 - 2158199 - G 71 -8.6 -3.54902 | TTATCTAACAAGTAA TCATCACC AAAA GGCGATGA CGTTCCACCTACTGT TERM 1946 2158877 - 2158854 - g 82 -3.1 -5.48213 | opp_overlap 2158856, overlap 2158855 2158856 GACGTAAAAGAAAAA GTCGTCGTC GCCAGG AAGGACGAC GTATTTTAGAACACG Ava_1720 2158829 - 2159146 + | hypothetical protein Ava_1721 2160199 - 2159669 - | hypothetical protein Ava_1722 2160600 - 2160253 - | PadR family transcriptional regulator Ava_1723 2161399 - 2161977 + | hypothetical protein TERM 1947 2162110 - 2162100 - g 71 -6.8 -4.11039 | ATATTAAGCAAATAA GGGA AAA TCCC CAACTAATTCAGGAA TERM 1948 2163228 - 2163212 - g 73 -3.6 -5.03145 | overlap 2163213 GAAGCGGGTAAAAAA GGGACG CAGTT CGTCCA TACCCTCAACGGTTC Ava_1724 2162078 - 2163358 + | seryl-tRNA synthetase TERM 1949 2163414 - 2163450 + F 79 -10.3 -3.20307 | opp_overlap 2163414 2163415, overlap 2163412 2163415 ATTTTTTACGAATAA CCTCCATATAATCACTT CAA GAGAGATTATATGGAGA TATTGATACTGTTAC TERM 1950 2163450 - 2163414 - f 91 -11.8 -3.72027 | opp_overlap 2163414 2163412 2163415, overlap 2163415 ATTTTTTACGAATAA CCTCCATATAATCACT TCAAG AGAGATTATATGGAGA TATTGATACTGTTAC TERM 1951 2163415 - 2163449 + F 91 -13.8 -2.51702 | opp_overlap 2163414 2163415, overlap 2163414 2163412 TTTTTTACGAATAAC CTCCATATAATCACTT CAA GAGAGATTATATGGAG ATATTGATACTGTTA TERM 1952 2163449 - 2163415 - f 90 -13.1 -2.82895 | opp_overlap 2163415 2163414 2163412, overlap 2163414 TTTTTTACGAATAAC CTCCATATAATCACT TCAAG AGAGATTATATGGAG ATATTGATACTGTTA Ava_1725 2163521 - 2163832 + | hypothetical protein Ava_1726 2163833 - 2164183 + | hypothetical protein Ava_1727 2164299 - 2164481 + | hypothetical protein Ava_1728 2164486 - 2164731 + | hypothetical protein TERM 1953 2164903 - 2164922 + G 75 -7.2 -4.40561 | TAAGCAGATTCTCTT TCATCTCA ATCT TGAGGTGA TTCTTTTTAACCAAG Ava_1729 2164724 - 2165107 + | PilT protein-like TERM 1954 2165582 - 2165593 + G 75 -7.2 -4.33153 | TATATGCTGCTGGTA GCCC AGGT GGGC TTTGTTGGTATTGGA Ava_1730 2165249 - 2166343 + | hypothetical protein Ava_1731 2166340 - 2167011 + | DNA-(apurinic or apyrimidinic site) lyase / endonuclease III TERM 1955 2167136 - 2167118 - f 70 -3.1 -5.00642 | TAAGTCACACAAAAA TAGAGGC GATTA GCCTTTA GTAAATGTAGAATGG rpsN 2167182 - 2167484 + | 30S ribosomal protein S14 Ava_1733 2167869 - 2167540 - | hypothetical protein aat 2167977 - 2168552 + | leucyl/phenylalanyl-tRNA--protein transferase Ava_1735 2168703 - 2168942 + | hypothetical protein TERM 1956 2169052 - 2169022 - T 100 -9 -4.88736 | opp_overlap 2169016 2169029, overlap 2169026 TACTATTCATAAAAA TTAGTAGGGTGGGC ATT GCCCACCTTATCAA TATCAATTTTCTATG TERM 1957 2169048 - 2169026 - T 83 -12 -2.59069 | opp_overlap 2169016 2169029, overlap 2169022 ATTCATAAAAATTAG TAGGGTGGGC ATT GCCCACCTTA TCAATATCAATTTTC TERM 1958 2169029 - 2169045 + T 100 -13.7 -3.40071 | opp_overlap 2169026 2169022, overlap 2169016 CATAAAAATTAGTAG GGTGGGC ATT GCCCACC TTATCAATATCAATT TERM 1959 2169117 - 2169088 - T 71 -8.7 -3.20639 | overlap 2169085 GCATCAAATAAATGA TCTAGAGACGTTG CATA CAACATCTCTACA GTACAGAATAAAGTG Ava_1736 2170011 - 2169154 - | hypothetical protein TERM 1960 2169309 - 2169321 + g 78 -4.1 -5.15381 | CCTGATATTTTTGTA CATCA TCC TGGTG TTTTTTGGCTATATT Ava_1737 2170117 - 2171544 + | phosphoglucomutase/phosphomannomutase TERM 1961 2171551 - 2171586 + F 76 -7.6 -4.08546 | opp_overlap 2171549, overlap 2171553 2171555 TTAGGATAAGAATCT CAAGCGCAGATGAACG CCTG TGTTCATCTGCGTGTA TTTGTGGTTCGTGGT TERM 1962 2171553 - 2171584 + F 80 -10.2 -3.63241 | opp_overlap 2171549, overlap 2171551 2171555 AGGATAAGAATCTCA AGCGCAGATGAACG CCTG TGTTCATCTGCGTG TATTTGTGGTTCGTG TERM 1963 2171555 - 2171582 + F 100 -15 -3.38415 | opp_overlap 2171549, overlap 2171553 2171551 GATAAGAATCTCAAG CGCAGATGAACG CCTG TGTTCATCTGCG TGTATTTGTGGTTCG Ava_1738 2171560 - 2171877 + | hypothetical protein Ava_1739 2172002 - 2173981 + | hypothetical protein Ava_1740 2174046 - 2174246 + | hypothetical protein Ava_1741 2174256 - 2174486 + | hypothetical protein Ava_1742 2175207 - 2174527 - | hypothetical protein TERM 1964 2175368 - 2175339 - R 100 -14.5 -4.55128 | gap 1, opp_overlap 2175333 2175332 ATGGTCAAATTAAAA CTCACGCA-CAGAT AAA ATCTGATGCGTGAG TATAAGCTTACTTGA Ava_1743 2176204 - 2175467 - | hypothetical protein TERM 1965 2175606 - 2175625 + g 95 -7.8 -4.93365 | AAAATACGTTCCTCT GGGGTAAG CAAC CTTTCCCC TTTTTCGTTATACCA TERM 1966 2176593 - 2176573 - g 100 -9 -5.40072 | opp_overlap 2176575 TGCGTGGTAAAAAAA GAGCAGGT ACACA ACCCGCTC CTTCAAGAATATAAG Ava_1744 2176353 - 2176607 + | hypothetical protein TERM 1967 2176649 - 2176622 - T 73 -8.6 -3.35869 | gap 1, opp_overlap 2176648, overlap 2176615 AGTAGAAATGATGAA GCACCAGTTAATT ACC AATTA-CTGGCGC ACTTAAGGAAACTTT Ava_1745 2178206 - 2176629 - | NAD(P)H-quinone oxidoreductase subunit 4 TERM 1968 2177707 - 2177724 + g 71 -4.7 -4.65895 | TACAAAATAAATTTG GTGGCTG CGTA CTGCCGC TTTTTACCTCCCCAA TERM 1969 2177837 - 2177817 - G 73 -8.3 -3.66356 | ATCCTGAACGGCAAA TACGGCGAT TTG ACCGCCATA CATAGCCAGGAGCAA TERM 1970 2177893 - 2177862 - G 70 -3.6 -4.80167 | overlap 2177864 GAGCAAAAAGTAAAA TAGCCTGGGCTTTA AGGT CACAGGCCAGGCTG CTAAGGTGGCTAGGG TERM 1971 2178356 - 2178321 - R 75 -5.7 -4.72277 | gap 3 AACAACATAAAGAAA GATGAAGG-C-GGGT-TA AGC TATACCCAGTCCTTCATC CCCATACAATATACT Ava_1746 2180559 - 2178469 - | NAD(P)H-quinone oxidoreductase subunit F TERM 1972 2178606 - 2178589 - G 71 -4.9 -4.68506 | gap 1, overlap 2178590 2178591 AACCAAGGTGAAAAA GCCTGTCA AGT TGACAG-C ACCATCAACAACCCG TERM 1973 2180022 - 2180002 - G 84 -9.7 -3.86916 | opp_overlap 2180012 CAGCAGTAGACCAAA GTCACCTAC ACG GTTGGTGAC AAACGCTTTTTGGGC TERM 1974 2180446 - 2180458 + g 71 -6.9 -4.17448 | opp_overlap 2180436 CAACACAGCGTTTAG CTGCC GCA GGCGG TTTGTCGTTTGATTG TERM 1975 2180668 - 2180639 - R 100 -15.9 -4.46212 | opp_overlap 2180631 2180641 CCCTTGAGGATAAAA TACCCCACCCAAT AACA ATTGAGTGGGGTA TTAAGCATGGTTTTA TERM 1976 2180641 - 2180666 + r 85 -11.9 -3.05536 | opp_overlap 2180639, overlap 2180631 CTTGAGGATAAAATA CCCCACCCAAT AACA ATTGAGTGGGG TATTAAGCATGGTTT Ava_1747 2181142 - 2180756 - | thioredoxin-related Ava_1748 2182237 - 2181521 - | NnrU TERM 1977 2182218 - 2182206 - G 74 -6.3 -4.4891 | overlap 2182209 CCCAGCATGACAAAA TGACT CGG AGTCA ACCAAGGATTCAGCA TERM 1978 2182429 - 2182458 + H 71 -4.9 -4.59853 | gap 1 ATTCCTCTGGGAACG TTGGCCGGTGTCGG TTT CCGTC-TCGCCCAA TTTTTACAAAATTCA TERM 1979 2182492 - 2182478 - H 74 -4.3 -4.89729 | opp_overlap 2182478 TACAAAATTCAAAAA GCTTA TATTT TAAGC TTTCCCTGATTTAGA Ava_1749 2182610 - 2183623 + | LysR family transcriptional regulator TERM 1980 2184182 - 2184154 - T 77 -10.5 -2.78463 | opp_overlap 2184147 2184157, overlap 2184157 ACTTGCCCGATTACA CAATCTGTTTG TGGTGGT CAAACAGATTG ATGAGACTGAGCAGT Ava_1750 2185072 - 2184353 - | Crp/FNR family transcriptional regulator TERM 1981 2185206 - 2185184 - H 73 -5.5 -4.67353 | opp_overlap 2185178 2185184 TCAGCCATCCAAAAA GCAGAGGGC TATTT GCGCTCTAC TATTTTGTTATACTT Ava_1751 2185383 - 2186258 + | arginyl tRNA synthetase anticodon binding Ava_1752 2187412 - 2186597 - | HAD family hydrolase TERM 1982 2187155 - 2187180 + g 73 -2.6 -5.15634 | overlap 2187155 TTGTTCAGCCGTCTT TCTATCTACA GGTAGA TGTTGATGGA TTTTTTGGTCAGATG Ava_1753 2188170 - 2187478 - | ABC transporter-like Ava_1754 2188935 - 2188285 - | cobalt transport protein Ava_1755 2189848 - 2188928 - | cobalamin (vitamin B12) biosynthesis CbiM protein Ava_1756 2190951 - 2190127 - | cobalt transport protein ATP-binding subunit Ava_1757 2191872 - 2191072 - | cobalt transport protein Ava_1758 2192171 - 2191869 - | cobalt transport protein CbiN Ava_1759 2192844 - 2192158 - | cobalt transport protein CbiM TERM 1983 2193670 - 2193690 + G 83 -11.1 -3.54459 | GGTTGGGTAGTGTTG GCGTGGCTG GTG CAGCTGCGC TTTGGCAGACATTGA Ava_1760 2193591 - 2194607 + | multicopper oxidase, types 2 and 3 Ava_1761 2194803 - 2195840 + | hypothetical protein Ava_1762 2195993 - 2196427 + | Ferritin and Dps Ava_1763 2196530 - 2197477 + | Iron permease FTR1 Ava_1764 2198450 - 2197527 - | periplasmic binding protein TERM 1984 2197642 - 2197664 + g 74 -4.2 -5.00616 | overlap 2197646 TTATTCTTAGTCGCG GGTAGTTTTT GCC AAAAACTCTC TTTTTTGAAGGAAGC TERM 1985 2198556 - 2198611 + r 100 -14.8 -3.76224 | gap 1, opp_overlap 2198585 GGTATTTAAGTATCT GTAG-GGTGGGCAATGCTCACCGTATC ATA GTTGTGGTGGGCATTGCCCAACGCCAC TTTCGTGACTGCCGG Ava_1765 2200662 - 2199205 - | FAD-dependent pyridine nucleotide-disulphide oxidoreductase Ava_1766 2201874 - 2200771 - | threonine-phosphate decarboxylase Ava_1767 2202185 - 2201901 - | nucleoid protein Hbs Ava_1768 2204241 - 2202733 - | cobyrinic acid a,c-diamide synthase Ava_1769 2204397 - 2206679 + | hypothetical protein Ava_1770 2207483 - 2206788 - | hypothetical protein Ava_1771 2208486 - 2207815 - | rhomboid-like protein Ava_1772 2211917 - 2208798 - | hypothetical protein TERM 1986 2208925 - 2208943 + g 78 -2.4 -5.43414 | overlap 2208927 ATGACTTCATCTCGC TGTTGCCA AAC TGGAAATA TTTTTTGTCTATCAT Ava_1773 2212418 - 2212729 + | penicillin amidase TERM 1987 2212962 - 2212927 - f 100 -14 -3.19255 | gap 1 CCAATACAGACCTAA CCCCCAACCCCTTCCCT TGT AGGGAAGGGGA-GTGGG ACTCAAAGCCTCTCT TERM 1988 2212994 - 2212970 - f 95 -12.9 -3.65351 | opp_overlap 2212971, overlap 2212971 GGAGTGGGACTCAAA GCCTCTCTCCT GCG AGGAGAGAGGT TTGGAGAGAGGTCAA TERM 1989 2212993 - 2212971 - f 100 -16.4 -2.78996 | opp_overlap 2212971, overlap 2212970 GAGTGGGACTCAAAG CCTCTCTCCT GCG AGGAGAGAGG TTTGGAGAGAGGTCA TERM 1990 2212971 - 2212993 + F 100 -16.4 -3.53444 | opp_overlap 2212971 2212970 GAGTGGGACTCAAAG CCTCTCTCCT GCG AGGAGAGAGG TTTGGAGAGAGGTCA Ava_1774 2213239 - 2213400 + | hypothetical protein Ava_1775 2213465 - 2214421 + | asparaginase TERM 1991 2214468 - 2214439 - T 74 -3.7 -5.24531 | opp_overlap 2214434 2214439 ATTGGGGACAAAAAA GTAAAAAGTAAAA AGGT TTTTTCTTTTGAC TTTTGCCTTTTGACT Ava_1776 2215917 - 2214562 - | glucosamine-1-phosphate N-acetyltransferase / UDP-N-acetylglucosamine pyrophosphorylase Ava_1777 2217283 - 2216039 - | metal dependent phosphohydrolase, HD region with response regulator receiver modulation Ava_1778 2218813 - 2217902 - | hypothetical protein Ava_1779 2218912 - 2219730 + | rhodanese-like protein Ava_1780 2221132 - 2219777 - | hypothetical protein Ava_1781 2221328 - 2222491 + | hypothetical protein Ava_1782 2224659 - 2222788 - | hypothetical protein TERM 1992 2224200 - 2224190 - G 75 -5.4 -4.81083 | GCTAAGGATGAAAAA GATG CTG CATC CTCGTCTTCTTGATC TERM 1993 2224351 - 2224382 + g 70 -5.2 -4.42974 | opp_overlap 2224354, overlap 2224347 2224353 CTGATAAGGTGGTAA TGATTGCAGTGCTT CCTC AAGTACTGCAAAAA TTTCTTGTGTATCAA TERM 1994 2226286 - 2226267 - g 70 -3.6 -4.82901 | opp_overlap 2226270, overlap 2226270 GGCTGCTGACAAAAA TACTCAAG TGAT CTTGATTA ACTTGCTAGGAAGTA Ava_1783 2225359 - 2226585 + | succinyl-CoA synthetase (ADP-forming) beta subunit Ava_1784 2226713 - 2227594 + | succinyl-CoA synthetase (ADP-forming) alpha subunit TERM 1995 2227583 - 2227612 + T 73 -7.3 -4.18018 | opp_overlap 2227583 CAATTATTAAAAAAG GCAATTCATTAAT CAAA ATTTATGAGTTGC TTTTCGGTGAACAGC Ava_1785 2228472 - 2227591 - | aspartoacylase TERM 1996 2228680 - 2228651 - R 100 -17.3 -4.07568 | gap 1, opp_overlap 2228652 2228653, overlap 2228652 2228668 2228669 CCTCTCTCTTGAAAA GTTCTGAGCGGAGG AAA CCTCCGCTCAGA-C TTTTCGCTCCGACGC TERM 1997 2228680 - 2228652 - R 100 -17.5 -3.04398 | opp_overlap 2228652 2228653, overlap 2228651 2228668 2228669 CTCTCTCTTGAAAAG TTCTGAGCGGAGG AAA CCTCCGCTCAGAC TTTTCGCTCCGACGC TERM 1998 2228652 - 2228680 + r 100 -17.5 -4.18018 | opp_overlap 2228651 2228652 2228668 2228669, overlap 2228653 CTCTCTCTTGAAAAG TTCTGAGCGGAGG AAA CCTCCGCTCAGAC TTTTCGCTCCGACGC TERM 1999 2228653 - 2228679 + r 100 -21 -3.10597 | opp_overlap 2228651 2228652 2228668 2228669, overlap 2228652 TCTCTCTTGAAAAGT TCTGAGCGGAGG AAA CCTCCGCTCAGA CTTTTCGCTCCGACG TERM 2000 2228748 - 2228770 + r 100 -14.2 -3.5394 | ATAAAGGTTTTAACG CCTCTCTCCT TGC AGGGGAGAGG TTTGGAGAGGGGTTT TERM 2001 2228865 - 2228878 + r 78 -9.5 -3.55801 | opp_overlap 2228865 GCCATACAGACAAAA CCCGC GCAG GCGGG TTTAAAAAGCTTGAT TERM 2002 2228878 - 2228865 - R 91 -9.5 -4.64844 | opp_overlap 2228865 GCCATACAGACAAAA CCCGC GCAG GCGGG TTTAAAAAGCTTGAT Ava_1786 2231021 - 2228955 - | oligopeptidase B Ava_1787 2231817 - 2231059 - | hypothetical protein TERM 2003 2231609 - 2231594 - G 71 -4.6 -4.67011 | overlap 2231596 AATTTTACCCAAAAA CTCCAG GTTT CTGGTG CAGAGGCAAAAGCAT hemE 2232090 - 2233142 + | uroporphyrinogen decarboxylase TERM 2004 2233146 - 2233203 + F 100 -21.7 -3.80697 | overlap 2233144 2233147 GTTTTGGTGTAGTCA GTTGTCAGCTGACAGTTGACAGTTGAC GATG GTCAGTTGTTAACTGTCAGTTGACAAA TTCTCTTAATTTCCT TERM 2005 2233147 - 2233202 + F 100 -25.2 -2.87334 | overlap 2233144 2233146 TTTTGGTGTAGTCAG TTGTCAGCTGACAGTTGACAGTTGAC GATG GTCAGTTGTTAACTGTCAGTTGACAA ATTCTCTTAATTTCC Ava_1789 2233368 - 2234327 + | NAD-dependent epimerase/dehydratase Ava_1790 2234914 - 2234336 - | hypothetical protein TERM 2006 2234391 - 2234370 - G 73 -2.9 -5.14698 | AAATTTAAAATAAAA CCAGGAAGA ACAT TTTCCCCGG ATAAACTTGTAGGAG Ava_1791 2235846 - 2234998 - | hypothetical protein TERM 2007 2235578 - 2235565 - G 71 -6.7 -4.16842 | GGTATCGGTAATAAA TGGCA GAGT TGCCA ACCTAGCACCGAAAA Ava_1792 2236382 - 2235849 - | rhodanese-like protein Ava_1793 2237129 - 2236428 - | Beta-lactamase-like TERM 2008 2236834 - 2236855 + g 93 -4.3 -5.7946 | ACAATTGACCCGAAT TGCAGCACG TCAC CAGGCTGCA TTTTTTTGTTAGCAC Ava_1794 2237251 - 2237625 + | ArsR family transcriptional regulator TERM 2009 2238298 - 2238263 - g 75 -8.4 -3.89614 | gap 1, overlap 2238291 2238293 2238295 TGCAACGGGGAGAAA CATCTGGGACTTTCCGC ACC GCAGAAAAGCC-AGATG TGACAAGCACACCCG Ava_1795 2237851 - 2239440 + | cobalamin B12-binding TERM 2010 2239451 - 2239505 + T 85 -9.6 -4.07246 | gap 1, opp_overlap 2239453 2239455, overlap 2239455 2239459 GTTAAATAGATAGAA AATAGTAAGCGATCGCTTTCTAATT ATCACA GATTAGAAGGCGATCGCTTTC-ATC TTTAATTTGACCTAA TERM 2011 2239503 - 2239453 - T 91 -9.3 -4.70534 | gap 1, opp_overlap 2239451 2239455 2239459, overlap 2239455 TAAATAGATAGAAAA TAGTAAGCGATCGCTTTCTAAT TATCACAG ATTAGAAGGCGATCGCTTTC-A TCTTTAATTTGACCT TERM 2012 2239502 - 2239455 - T 100 -14.4 -3.94184 | opp_overlap 2239451 2239455 2239459, overlap 2239453 AATAGATAGAAAATA GTAAGCGATCGCTTTCTAAT TATCACAG ATTAGAAGGCGATCGCTTTC ATCTTTAATTTGACC TERM 2013 2239455 - 2239502 + T 100 -17.3 -2.7693 | opp_overlap 2239455 2239453, overlap 2239451 2239459 AATAGATAGAAAATA GTAAGCGATCGCTTTCTAATT ATCACA GATTAGAAGGCGATCGCTTTC ATCTTTAATTTGACC TERM 2014 2239459 - 2239498 + T 100 -16.7 -4.05229 | opp_overlap 2239455 2239453, overlap 2239455 2239451 GATAGAAAATAGTAA GCGATCGCTTTCTAATT ATCACA GATTAGAAGGCGATCGC TTTCATCTTTAATTT Ava_1796 2240038 - 2239544 - | methionine sulfoxide reductase B Ava_1797 2241498 - 2240305 - | peptidase M50 TERM 2015 2241537 - 2241553 + H 91 -5.9 -5.71712 | opp_overlap 2241536 2241534, overlap 2241537 TTTTAGTGAATACAT CACATAT ACT ATGTGTG TTTTTTTGTATAGGA TERM 2016 2241537 - 2241551 + H 79 -7.2 -4.50122 | opp_overlap 2241536 2241534, overlap 2241537 TTTTAGTGAATACAT CACATA TAC TATGTG TGTTTTTTTGTATAG TERM 2017 2242126 - 2242148 + G 74 -9.2 -3.39895 | opp_overlap 2242128 2242131, overlap 2242131 CCAGTATCATCCCAA TACTATCCGA TGG TCGGATTGTA TTAATTCGTAGACGA TERM 2018 2242131 - 2242143 + G 72 -7.7 -3.77119 | opp_overlap 2242131 2242128, overlap 2242126 ATCATCCCAATACTA TCCGA TGG TCGGA TTGTATTAATTCGTA Ava_1798 2242005 - 2242499 + | NUDIX hydrolase TERM 2019 2242594 - 2242583 - f 89 -5.8 -5.28481 | CACTGAACCAAAAAA CCCT TCTG AGGG TGGTCAATAGTCCAC TERM 2020 2243151 - 2243192 + G 80 -4.7 -5.09225 | opp_overlap 2243154, overlap 2243141 2243140 2243151 2243154 2243188 AATGCGGCGGTTGAG C-AAGCGATCGCCATTATT ATTTAA AATAATG-CGATCGCTCAG TTTTTTAACTAAGAT TERM 2021 2243188 - 2243154 - g 79 -11 -3.14132 | gap 1, opp_overlap 2243141 2243140 2243151 2243151 2243154 GCGGCGGTTGAGCAA GCGATCGCCATTATT ATTTAA AATAATG-CGATCGC TCAGTTTTTTAACTA TERM 2022 2243154 - 2243188 + G 79 -11 -2.93182 | gap 1, opp_overlap 2243154, overlap 2243141 2243140 2243151 2243151 GCGGCGGTTGAGCAA GCGATCGCCATTATT ATTTAA AATAATG-CGATCGC TCAGTTTTTTAACTA Ava_1799 2242723 - 2243550 + | Alpha/beta hydrolase fold Ava_1800 2244362 - 2243538 - | Short-chain dehydrogenase/reductase SDR Ava_1801 2245343 - 2244456 - | pantothenate kinase TERM 2023 2246787 - 2246770 - g 80 -4.7 -5.13473 | ATCACAGCCAAAAAA GGCGACG TTTC CAGCGCC ATGTTAGCCTCATGG Ava_1802 2245453 - 2247177 + | flavin reductase-like, FMN-binding Ava_1803 2247841 - 2249553 + | flavin reductase-like, FMN-binding Ava_1804 2250436 - 2249693 - | hypothetical protein TERM 2024 2249776 - 2249766 - G 71 -6.8 -4.18197 | ACTGTGTATTTAAAA GGTG ATG CACC AGAACAATTCATGTG TERM 2025 2250187 - 2250177 - G 74 -6.8 -4.31692 | AACCCATTATCAAAA CGGA TAA TCCG TGGGTCTTTGTTGTT Ava_1805 2250849 - 2250977 + | hypothetical protein Ava_1806 2250991 - 2251197 + | hypothetical protein TERM 2026 2251238 - 2251264 + T 93 -8 -5.1361 | overlap 2251241 TAAGTGTTTTATTTT TTAGGGTGTACG TCT TGTACACCCTTG TTTTTTAGGCTTTGT TERM 2027 2251241 - 2251261 + T 100 -11.9 -4.63993 | overlap 2251238 GTGTTTTATTTTTTA GGGTGTACG TCT TGTACACCC TTGTTTTTTAGGCTT Ava_1807 2252750 - 2251365 - | argininosuccinate lyase Ava_1808 2253088 - 2252882 - | hypothetical protein Ava_1809 2253975 - 2253187 - | phosphoribosylaminoimidazole carboxylase catalytic subunit Ava_1810 2255851 - 2254064 - | extracellular solute-binding protein TERM 2028 2254306 - 2254321 + g 77 -4.6 -4.94902 | CCCACGGTGCTACTT CCCAAC CTGT GATGGG TTTTTGTCCTGCTTG ispF 2256430 - 2255933 - | 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase trmD 2257189 - 2256455 - | tRNA (guanine-N(1)-)-methyltransferase Ava_1813 2257753 - 2258616 + | cyanophycinase TERM 2029 2258725 - 2258709 - f 73 -2.3 -5.36364 | opp_overlap 2258709 GTAAAAAGATAAAAA CTGTT TTTCATG AACAG TTTAGCGATCAATTC Ava_1814 2258789 - 2261494 + | cyanophycin synthetase Ava_1815 2261735 - 2261565 - | twin-arginine translocation protein TatA/E TERM 2030 2261648 - 2261662 + g 100 -5.7 -5.75342 | TTTTACCTAGTGCGC TTCCC AGTTC GGGAA TTTTTTTTGGGCCGA Ava_1816 2263335 - 2261938 - | Serine/threonine protein kinase Ava_1817 2263406 - 2264008 + | precorrin-6B methylase TERM 2031 2264389 - 2264406 + G 70 -2.7 -5.00923 | overlap 2264381 GCTGTCATGCCTATT GCAGGTA CATT TATTTGC TTTTATTTACTATTT Ava_1818 2264032 - 2265030 + | phosphatidate cytidylyltransferase Ava_1819 2265837 - 2265124 - | hypothetical protein Ava_1820 2266035 - 2266901 + | ribosomal large subunit pseudouridine synthase B Ava_1821 2266980 - 2267780 + | hypothetical protein TERM 2032 2267847 - 2267793 - T 100 -20.9 -3.96291 | TAGAAAGGGTATAAA GGTATGGGGGTATAGGGGTGTAGGT ATTAA ATCTACACCCCTACACCCTCAAACC GAATGTCACTAAGAA Ava_1822 2269518 - 2268001 - | glycoside hydrolase family protein Ava_1823 2269721 - 2270152 + | NUDIX hydrolase Ava_1824 2270237 - 2270635 + | YjgF-like protein TERM 2033 2270670 - 2270644 - T 100 -14.6 -4.8066 | opp_overlap 2270644 AAGATAATTCAAAAA TCCCCGACTTTT CCA AAAAATCGGGGA TTTCAATCTTTGTTC TERM 2034 2270644 - 2270670 + T 93 -12.4 -3.84931 | opp_overlap 2270644 AAGATAATTCAAAAA TCCCCGACTTTT CCA AAAAATCGGGGA TTTCAATCTTTGTTC Ava_1825 2272194 - 2270785 - | hypothetical protein Ava_1826 2273649 - 2272276 - | cysteine desulphurase-like protein TERM 2035 2274344 - 2274310 - g 70 -5.8 -4.28774 | opp_overlap 2274309 2274310 TTATTTAATTGAAAA CCTGATGGATATGT ATCATGG ACATTTACATCAGG ATTTACAAGCTTGGG Ava_1827 2273810 - 2274853 + | Rieske (2Fe-2S) region Ava_1828 2275089 - 2274841 - | hypothetical protein TERM 2036 2275254 - 2275276 + r 80 -11.3 -3.15544 | gap 1 TAGAAATTGACATCC TCCCCG-CCG TGAA CGGTCGGGGA TTCCTAAGCCTCACG TERM 2037 2275279 - 2275298 + r 76 -6.4 -4.43283 | GAACGGTCGGGGATT CCTAAGCC TCAC GACTTAGG TTTCTGTTTCTGTCC Ava_1829 2276498 - 2275287 - | IS891/IS1136/IS1341 transposase TERM 2038 2275423 - 2275409 - G 72 -7.8 -3.74077 | CTCCACAGACTGAAA CTGCGA GTC CCGCAG CCAAAATATTCTTAC TERM 2039 2276434 - 2276461 + g 100 -15 -3.06915 | overlap 2276427 GTACATCCCATTGTT CTTCTGAGCAAG GTTT CTTGCTCAGGAG TTGGATAGAATCGGT TERM 2040 2276544 - 2276564 + H 76 -7.5 -4.10855 | opp_overlap 2276545 2276546, overlap 2276545 2276561 2276562 ATCCAAATTAATTAA ATCCGTGCT ACA AGCACGGGG TTTTAAACCCATTTT TERM 2041 2276545 - 2276563 + H 79 -11 -3.0579 | opp_overlap 2276545 2276546, overlap 2276544 2276561 2276562 TCCAAATTAATTAAA TCCGTGCT ACA AGCACGGG GTTTTAAACCCATTT TERM 2042 2276563 - 2276545 - H 81 -8.8 -4.04394 | opp_overlap 2276545 2276544 2276561 2276562, overlap 2276546 TCCAAATTAATTAAA TCCGTGCT ACA AGCACGGG GTTTTAAACCCATTT TERM 2043 2276562 - 2276546 - H 85 -12.3 -3.01914 | opp_overlap 2276545 2276544 2276561, overlap 2276545 CCAAATTAATTAAAT CCGTGCT ACA AGCACGG GGTTTTAAACCCATT TERM 2044 2276561 - 2276575 + H 74 -4.2 -4.91109 | opp_overlap 2276546 2276545, overlap 2276545 2276544 2276562 CCGTGCTACAAGCAC GGGGTT TTA AACCCA TTTTTCTGATAAAAC Ava_1830 2276596 - 2277582 + | GTP cyclohydrolase subunit MoaA TERM 2045 2278054 - 2278075 + G 70 -7.4 -3.80893 | opp_overlap 2278053 GGGAGTTACAGAAGT CTGGTTTT GGGAGA AAAACCAG TTTAAGTTGTACCAT Ava_1831 2277617 - 2278285 + | hypothetical protein Ava_1832 2279540 - 2278350 - | hypothetical protein Ava_1833 2280442 - 2279657 - | hypothetical protein TERM 2046 2280018 - 2280033 + g 70 -5.4 -4.4874 | ATATATAACTTGACT TCACTG GCAA CGGTGA TTTTCAGTTTTTCAA TERM 2047 2282233 - 2282221 - g 86 -7.7 -4.63218 | TTGCTTTTAACAAAA TCGAC CAA GTCGA TAGCACCACTCTAGC Ava_1834 2280780 - 2282366 + | GTP-binding protein, HSR1-related TERM 2048 2282415 - 2282393 - f 100 -12 -4.62069 | opp_overlap 2282393 TTTCCATGTGAAAAA GCAGGGGGAA ATC TTCTCCCTGC TTCTTAATAAATCTC TERM 2049 2282393 - 2282415 + F 100 -14.2 -3.74361 | opp_overlap 2282393 TTTCCATGTGAAAAA GCAGGGGGAA ATC TTCTCCCTGC TTCTTAATAAATCTC Ava_1835 2282553 - 2282813 + | glutaredoxin GrxC Ava_1836 2282935 - 2283909 + | glutathione synthetase Ava_1837 2285472 - 2284186 - | cell division protein FtsZ Ava_1838 2285940 - 2285548 - | hypothetical protein Ava_1839 2287515 - 2286670 - | cell division protein FtsQ TERM 2050 2288473 - 2288461 - g 75 -5.5 -4.89393 | GAAATCTTAGAAAAA GCCGT AGA ACAGC TAAAGCGGCGGGGTC Ava_1840 2287867 - 2289198 + | hypothetical protein TERM 2051 2290455 - 2290467 + G 71 -4.9 -4.68908 | opp_overlap 2290453 2290455 GAAGAAAAGACAAGA TTTAG TAG CTAAA TTTATTTTACCTGCG Ava_1841 2289469 - 2294454 + | WD-40 repeat-containing protein Ava_1842 2294939 - 2294577 - | hypothetical protein TERM 2052 2295956 - 2295978 + G 76 -9.2 -3.45023 | opp_overlap 2295952, overlap 2295952 2295959 ACTTCCACAGACTTT GAAGGTACAT TCA AAGTACCTTC TTATCGTGGTGCTGC Ava_1843 2295446 - 2296267 + | photosystem II manganese-stabilizing protein PsbO TERM 2053 2296530 - 2296518 - f 70 -9.1 -3.10389 | opp_overlap 2296518, overlap 2296517 AGAAATGATACAAAG GGGCT TCT AGCCC TTTTTTTATTAGGTT TERM 2054 2296518 - 2296530 + F 100 -9.1 -5.83226 | opp_overlap 2296518 2296517 AGAAATGATACAAAG GGGCT TCT AGCCC TTTTTTTATTAGGTT Ava_1844 2297176 - 2297952 + | RNA polymerase sigma factor SigF TERM 2055 2298066 - 2298076 + F 76 -6.8 -4.42386 | opp_overlap 2298049 2298064 2298066, overlap 2298049 CCTGAAATACAAACA GGCA TTT TGCC TTTTATCAATAACAG Ava_1845 2298118 - 2298963 + | hypothetical protein Ava_1846 2298966 - 2299214 + | hypothetical protein TERM 2056 2300412 - 2300382 - g 72 -10 -2.8978 | opp_overlap 2300382, overlap 2300381 AGGGGGAGAGGAAAC TTGTCTAGTTAA TCCTTAT TTAACTAGACAA TTATGGCTACCTGGA TERM 2057 2300382 - 2300412 + G 76 -10 -3.36878 | opp_overlap 2300382 2300381 AGGGGGAGAGGAAAC TTGTCTAGTTAA TCCTTAT TTAACTAGACAA TTATGGCTACCTGGA Ava_1847 2299669 - 2300814 + | hypothetical protein Ava_1848 2300833 - 2304090 + | hypothetical protein Ava_1849 2304259 - 2305833 + | hypothetical protein TERM 2058 2306051 - 2306022 - g 85 -5.9 -5.22006 | gap 1 TTATCACAACAAAAA CAGAATAAT-GATG CAC CACCAATCATTCTG ATTAAAGATGAAGGT Ava_1850 2305878 - 2306525 + | hypothetical protein Ava_1851 2306717 - 2309323 + | hypothetical protein psaI 2309433 - 2309573 + | photosystem I reaction center subunit VIII TERM 2059 2309799 - 2309761 - T 82 -7.5 -4.42788 | opp_overlap 2309768, overlap 2309766 2309768 TTTAAGTTCACAAAA CAGAATACCGCCTATCT TTTGG AGACAGGCGGTTTTTTA ATGCTGTTTTCTAAA TERM 2060 2309794 - 2309766 - T 85 -9.6 -4.02581 | opp_overlap 2309768, overlap 2309761 2309768 GTTCACAAAACAGAA TACCGCCTATCT TTTGG AGACAGGCGGTT TTTTAATGCTGTTTT TERM 2061 2309792 - 2309768 - T 90 -12.2 -3.59658 | opp_overlap 2309768, overlap 2309766 2309761 TCACAAAACAGAATA CCGCCTATCT TTTGG AGACAGGCGG TTTTTTAATGCTGTT TERM 2062 2309768 - 2309792 + T 100 -10.7 -5.2112 | opp_overlap 2309768 2309766 2309761 TCACAAAACAGAATA CCGCCTATCTT TTG GAGACAGGCGG TTTTTTAATGCTGTT Ava_1852 2309986 - 2309840 - | photosystem II reaction center protein J TERM 2063 2310001 - 2309988 - R 70 -5.3 -4.44667 | TCCCTTAACAACAAA TCAAC ACAG GTTGA ATAAATGAAAATTCA Ava_1853 2310151 - 2310032 - | photosystem II reaction center L Ava_1854 2310309 - 2310172 - | cytochrome b559 subunit beta TERM 2064 2310330 - 2310345 + r 70 -2.6 -5.15969 | overlap 2310325 CAAACTACTTTTGGA TAAGTT GTTC AACTTG TTTTTTCGCTTCAAA Ava_1855 2310567 - 2310319 - | cytochrome b559 subunit alpha Ava_1856 2311692 - 2310673 - | Ycf48-like protein Ava_1857 2312186 - 2311851 - | rubredoxin-type Fe(Cys)4 protein Ava_1858 2312382 - 2312744 + | NADH dehydrogenase subunit A Ava_1859 2312735 - 2313472 + | NADH dehydrogenase subunit B Ava_1860 2313465 - 2313992 + | NADH dehydrogenase subunit J TERM 2065 2314036 - 2314070 + F 100 -10.1 -5.00616 | gap 1, overlap 2314039 2314042 ATTTTCATATCTCAT CTTTAACCCCTTTCCG GCGG CGGAGAGGGGT-AATG TTTTTTAAACGCAAA TERM 2066 2314039 - 2314068 + F 95 -12.9 -4.13561 | overlap 2314036 2314042 TTCATATCTCATCTT TAACCCCTTTCCG GCGG CGGAGAGGGGTAA TGTTTTTTAAACGCA TERM 2067 2314042 - 2314065 + F 100 -14.6 -3.08977 | overlap 2314039 2314036 ATATCTCATCTTTAA CCCCTTTCCG GCGG CGGAGAGGGG TAATGTTTTTTAAAC Ava_1861 2314171 - 2314404 + | kinesin light chain-like Ava_1862 2314675 - 2315517 + | hypothetical protein Ava_1863 2315626 - 2316435 + | glucose 1-dehydrogenase TERM 2068 2316908 - 2316952 + G 100 -15.9 -2.52896 | opp_overlap 2316893 2316909 2316912, overlap 2316912 TCCTACGCCCAACGT AGAAGTTGACGGAGAGCGTTT GGG AAATGCTTACCGTCAACTTCG TAGCTTACAAGCTAG TERM 2069 2316951 - 2316909 - g 100 -15 -2.53263 | opp_overlap 2316908 2316912, overlap 2316893 2316912 CCTACGCCCAACGTA GAAGTTGACGGAGAGCGTTT GGG AAATGCTTACCGTCAACTTC GTAGCTTACAAGCTA TERM 2070 2316912 - 2316948 + G 100 -15.3 -3.21912 | opp_overlap 2316909 2316912, overlap 2316908 ACGCCCAACGTAGAA GTTGACGGAGAGCGTTT GGG AAATGCTTACCGTCAAC TTCGTAGCTTACAAG TERM 2071 2316948 - 2316912 - g 83 -10.9 -3.42056 | opp_overlap 2316912 2316908, overlap 2316909 ACGCCCAACGTAGAA GTTGACGGAGAGCGTTT GGG AAATGCTTACCGTCAAC TTCGTAGCTTACAAG Ava_1864 2316462 - 2316992 + | hypothetical protein Ava_1865 2317186 - 2316989 - | hypothetical protein Ava_1866 2317804 - 2317193 - | hypothetical protein infB 2321112 - 2317996 - | translation initiation factor IF-2 TERM 2072 2318708 - 2318727 + g 95 -7.8 -4.93365 | overlap 2318711 TTGTCGGCACGATCT GATGCCAG CGCT CTGGCTTC TTTTTCGTTGTCGAA TERM 2073 2318711 - 2318724 + g 82 -8.1 -4.56187 | overlap 2318708 TCGGCACGATCTGAT GCCAG CGCT CTGGC TTCTTTTTCGTTGTC TERM 2074 2318878 - 2318866 - G 72 -7.7 -3.74693 | CCGGACTTTACCAAA TGCTG AAC CAGCA AGCAGTATATCTCCT TERM 2075 2320317 - 2320329 + g 74 -4.8 -4.91109 | TGACGGGGCCTTGGG CAGG GCGAG CCTG TTTTTGTACTGGAGC TERM 2076 2321026 - 2321052 + g 70 -5.8 -4.31835 | overlap 2321036 TTTGACCGCAATATT GAGCTGGTCGCA AAT TGCTAGTAGCTC TTTGTTATCCAAATT Ava_1868 2321409 - 2321251 - | hypothetical protein Ava_1869 2321874 - 2321605 - | hypothetical protein nusA 2323300 - 2322023 - | transcription elongation factor NusA Ava_1871 2323920 - 2323459 - | hypothetical protein TERM 2077 2323956 - 2323941 - R 93 -6.8 -5.94214 | opp_overlap 2323941 AATACAATAAAAAAA GTGGGC ATCA ACCCAC TTCCTGCGATAGGGA Ava_1872 2325549 - 2324131 - | hypothetical protein TERM 2078 2325160 - 2325181 + g 84 -6.5 -5.05712 | TTTGGCTGAATCATT GCCGATGCG ATCG CGCATTCGC TTTTTGATTCTTTCT Ava_1873 2325804 - 2326589 + | peptidoglycan binding domain-containing protein TERM 2079 2326693 - 2326644 - T 76 -9.3 -3.30474 | opp_overlap 2326641, overlap 2326647 TTGCATAACTACTAA TAAGGGCTGTTAACTGTTGGCTG TTAA CGGTCAACGGTCAAAAGCCCTCA CGATGGATTATGTAG TERM 2080 2326690 - 2326647 - T 78 -8.8 -3.78793 | opp_overlap 2326641, overlap 2326644 CATAACTACTAATAA GGGCTGTTAACTGTTGGCTG TTAA CGGTCAACGGTCAAAAGCCC TCACGATGGATTATG Ava_1874 2327630 - 2326737 - | hypothetical protein TERM 2081 2326885 - 2326915 + g 79 -8.3 -4.10781 | gap 1, opp_overlap 2326885, overlap 2326895 2326910 AGTTCGTAGATAGAA TGGGGCAGTCC-TA CAGT TATGGGCAGCCCCA TTTCTGTGGCTTCTT Ava_1875 2328524 - 2327724 - | hypothetical protein Ava_1876 2328681 - 2328535 - | hypothetical protein TERM 2082 2328738 - 2328762 + r 71 -7.1 -3.84246 | TCGGTTAGCTTGTAA TCATCAGGGAG TTT TTCCCAGGTGA TTTGGTAGTTGGGGC Ava_1877 2330395 - 2328872 - | DNA repair protein RadA TERM 2083 2329488 - 2329514 + g 100 -9.4 -4.71061 | opp_overlap 2329487 2329486 2329512 ACCATTTCAAAGATG CCGATTTCGTGC GTT GCACCAAAGCGG TTTTTCACTGTGCGT Ava_1878 2330572 - 2331300 + | two component transcriptional regulator Ava_1879 2331361 - 2332008 + | hypothetical protein TERM 2084 2332463 - 2332473 + G 71 -4 -4.86621 | opp_overlap 2332463 ATAGTAGTTATTATA TTCA GAA TGAA TTTTTAATTAGAGAT Ava_1880 2332165 - 2332818 + | hypothetical protein Ava_1881 2332863 - 2333381 + | hypothetical protein TERM 2085 2333557 - 2333567 + F 100 -3.2 -6.14618 | opp_overlap 2333548 2333544 TACTAACAATTCAAT TGTC AGG GGCA TTTTTTTATTTTGTA TERM 2086 2334019 - 2334051 + F 80 -8.6 -3.91196 | gap 1, opp_overlap 2334018 GGTTCTCATAATTAT TTGGCCCTAGACTTC AGAT GAAGTCTAGG-CAAA TTTGATGTATGTAAA TERM 2087 2334798 - 2334811 + F 70 -5.3 -4.41616 | overlap 2334794 CCAGGTTAGGTGATA CAAGT ATGA ACTTG TTTCTTTGCCAGAAT TERM 2088 2335905 - 2335883 - g 70 -5.6 -4.2803 | overlap 2335886 GACTTTAATTGAAAA CAACATTGTT TTT AACAACGGTG GCAGAGGCATCCATA TERM 2089 2335902 - 2335886 - g 70 -5.9 -4.25859 | overlap 2335883 TTTAATTGAAAACAA CATTGTT TTT AACAACG GTGGCAGAGGCATCC Ava_1882 2335095 - 2336381 + | parallel beta-helix repeat-containing protein TERM 2090 2336453 - 2336422 - f 72 -9.5 -2.75268 | gap 2, overlap 2336421 TAAAACCGACAGAAG CCCCACGCCTGACCC GATA GGG-CAG-CGTGGGA TGAATGGAGGAGTCG Ava_1883 2336773 - 2337015 + | hypothetical protein TERM 2091 2337902 - 2337939 + G 79 -7.7 -4.35926 | gap 1, opp_overlap 2337903, overlap 2337903 CTTCTTTACTAATGT ATGTGGCAGGTGC-GGAA AGA TTCCTGAACCAGCCACAA TTTTGGGTTTGGGAT TERM 2092 2337938 - 2337903 - g 76 -11.2 -2.56596 | gap 1, opp_overlap 2337902 2337903 TTCTTTACTAATGTA TGTGGCAGGTGC-GGAA AGA TTCCTGAACCAGCCACA ATTTTGGGTTTGGGA TERM 2093 2337903 - 2337938 + G 79 -11.2 -3.20832 | gap 1, opp_overlap 2337903, overlap 2337902 TTCTTTACTAATGTA TGTGGCAGGTGC-GGAA AGA TTCCTGAACCAGCCACA ATTTTGGGTTTGGGA Ava_1884 2337267 - 2338004 + | hypothetical protein Ava_1885 2338689 - 2339357 + | hypothetical protein TERM 2094 2339391 - 2339415 + T 90 -8.7 -4.614 | opp_overlap 2339391, overlap 2339386 CCTAAATTCAAAAAA GTTGCTTTTAA AAA TAAAAAGCAAC TTTTATATAATTCCC TERM 2095 2339415 - 2339391 - T 100 -8.7 -5.22039 | opp_overlap 2339391 2339386 CCTAAATTCAAAAAA GTTGCTTTTAA AAA TAAAAAGCAAC TTTTATATAATTCCC TERM 2096 2339501 - 2339514 + T 88 -5.3 -5.53991 | TGCGTGAGTTTCACA TACCA AAGT TGGTA TTTTTTTAATCAATC Ava_1886 2342016 - 2339533 - | peptidase TERM 2097 2342477 - 2342499 + r 100 -13.6 -5.85178 | opp_overlap 2342477 GTTAGCAGCAAAAAA GACTTGGATA AAC TATCCAAGTC TTTTTTTTCAATATT TERM 2098 2342499 - 2342477 - R 100 -13.6 -5.1861 | opp_overlap 2342477 GTTAGCAGCAAAAAA GACTTGGATA AAC TATCCAAGTC TTTTTTTTCAATATT TERM 2099 2342621 - 2342635 + r 81 -2.8 -5.76633 | opp_overlap 2342621 AAATAATTAAAAAAC CTGTGA TTT TCAGAG TTTTTTTGTGTCTAC Ava_1887 2344595 - 2343027 - | transposase IS4 TERM 2100 2343550 - 2343563 + g 74 -6.7 -4.3129 | opp_overlap 2343550 GTTGCTTGCCAACTA GTTCC GGGG GGAAC TTTTCCTACTAAATC TERM 2101 2344764 - 2344740 - R 72 -9.3 -2.72511 | opp_overlap 2344729 2344742, overlap 2344739 TCCACTGTTCCAAAC TCTTGAGGGGC TTA ACCCCTCAATA ATTCGCCAACAGTAT TERM 2102 2344742 - 2344762 + r 78 -11.2 -2.71011 | opp_overlap 2344740 2344739, overlap 2344729 CACTGTTCCAAACTC TTGAGGGG CTTAA CCCCTCAA TAATTCGCCAACAGT Ava_1888 2345530 - 2344868 - | HEAT repeat-containing PBS lyase Ava_1889 2346073 - 2345615 - | signal transduction protein Ava_1890 2346595 - 2346167 - | Mutator MutT TERM 2103 2346741 - 2346703 - R 74 -8.3 -3.75506 | opp_overlap 2346708, overlap 2346708 ACAACTGACCAATAA CAAAACTCGGCAGATTT ATTGG ATATCTACCGAGTTTTT ACTTATTAAAAATAT TERM 2104 2346708 - 2346736 + r 80 -6 -4.99435 | opp_overlap 2346703 2346708 TGACCAATAACAAAA CTCGGCAGATTT ATTGG ATATCTACCGAG TTTTTACTTATTAAA TERM 2105 2346736 - 2346708 - R 95 -8.2 -4.92757 | opp_overlap 2346708, overlap 2346703 TGACCAATAACAAAA CTCGGCAGATTT ATTGG ATATCTACCGAG TTTTTACTTATTAAA Ava_1891 2347379 - 2346906 - | hypothetical protein TERM 2106 2347446 - 2347490 + r 100 -22.6 -2.62184 | opp_overlap 2347446 AGTCCATATTAAAAA GTCAGTAGTCAGATGTAAAT CCTGT GTTTACATCTGACTACTGAC TACTGTACAGACGCA TERM 2107 2347490 - 2347446 - R 100 -21.9 -4.80882 | opp_overlap 2347446 AGTCCATATTAAAAA GTCAGTAGTCAGATGTAAA TCCTGTG TTTACATCTGACTACTGAC TACTGTACAGACGCA Ava_1892 2348521 - 2347523 - | RNA polymerase sigma factor SigD carB 2352675 - 2349382 - | carbamoyl phosphate synthase large subunit TERM 2108 2353240 - 2353268 + r 88 -5.4 -5.57729 | gap 1, opp_overlap 2353240 ATATAAACAAAAAAA TGGCAGATAAGTA TCAA TACTC-TCTGCCA TTTTTTATATTCTTT TERM 2109 2353268 - 2353240 - R 100 -7.6 -6.04953 | gap 1, opp_overlap 2353240 ATATAAACAAAAAAA TGGCAGATAAGTA TCAA TACTC-TCTGCCA TTTTTTATATTCTTT Ava_1894 2353907 - 2353353 - | Ferritin and Dps TERM 2110 2353431 - 2353447 + g 77 -3.7 -5.14965 | ATGATAAGCTCTTTC TTCGGTT TTT AACAGAA TTTTTTCGTAGAGGT TERM 2111 2353843 - 2353857 + g 71 -8.6 -3.41051 | GCAGTTACACTCCGA TCCAGT AGC ACTGGA TTGTCGTAAACCTGA fabG 2354372 - 2355067 + | 3-ketoacyl-(acyl-carrier-protein) reductase Ava_1896 2356278 - 2355127 - | deoxyhypusine synthase-like protein Ava_1897 2357034 - 2356633 - | hypothetical protein TERM 2112 2356741 - 2356727 - G 82 -5.7 -4.93296 | TGACCACTACAAAAA CGTTC TTTAC GAACG TGGCTAGTCAATAAT TERM 2113 2357169 - 2357202 + H 77 -2.5 -5.58522 | opp_overlap 2357172 2357174, overlap 2357171 2357172 GCCAAGTATCAAAAT CAATAGGTGAAAAAA CTAA TTTTTTCACCAAGTC TTTTTCTTTTCTCTG TERM 2114 2357199 - 2357172 - H 78 -8.6 -3.73345 | opp_overlap 2357171 2357169 2357172, overlap 2357174 AAGTATCAAAATCAA TAGGTGAAAAAA CTAA TTTTTTCACCAA GTCTTTTTCTTTTCT TERM 2115 2357172 - 2357199 + H 71 -8.6 -3.21407 | opp_overlap 2357172 2357174, overlap 2357171 2357169 AAGTATCAAAATCAA TAGGTGAAAAAA CTAA TTTTTTCACCAA GTCTTTTTCTTTTCT TERM 2116 2357197 - 2357174 - H 82 -11.2 -3.43546 | opp_overlap 2357172 2357171 2357169, overlap 2357172 GTATCAAAATCAATA GGTGAAAAAA CTAA TTTTTTCACC AAGTCTTTTTCTTTT Ava_1898 2357303 - 2357995 + | cob(I)yrinic acid a,c-diamide adenosyltransferase Ava_1899 2358498 - 2358055 - | hypothetical protein Ava_1900 2359322 - 2359140 - | hypothetical protein TERM 2117 2359909 - 2359890 - g 78 -9.3 -3.67597 | TTGCGGACTCAAGAA GCTGCTC TGACAG GAGCAGC CGAACCAGTAGATAA Ava_1901 2359401 - 2362145 + | ATPase, E1-E2 type TERM 2118 2362194 - 2362215 + F 76 -7.9 -4.0174 | opp_overlap 2362184 TATAGCCTATTTCTA GGGGCGTAC AGAT GTTCGCCTC TTTATGAATTCTATT Ava_1902 2362322 - 2363191 + | phosphate ABC transporter permease Ava_1903 2363408 - 2363695 + | hypothetical protein TERM 2119 2363776 - 2363761 - f 70 -3.3 -4.89852 | GTACAGGTATAAAAA TGCAA TTTTTT TTGCA AGATGGGTGAAATAT TERM 2120 2363778 - 2363796 + F 89 -6 -5.32699 | CAATTTTTTTTGCAA GATGGGTG AAA TATCCATC TTTTTTAGTATTTAA TERM 2121 2366018 - 2366040 + G 100 -10.6 -4.60041 | ATATGTTCAGTATGT TGGGAGCAAG TGC CTTGCTACCA TTTTTACCAATGAAT Ava_1904 2363836 - 2366574 + | magnesium-translocating P-type ATPase TERM 2122 2366795 - 2366768 - T 100 -12 -5.4477 | overlap 2366769 AAACCCCTAAAAAAA TCGCCCCCTGAA TGAG TTCAGGAGGCGC GGAGATTTGTACAGA TERM 2123 2366794 - 2366769 - T 100 -15.5 -3.85235 | overlap 2366768 AACCCCTAAAAAAAT CGCCCCCTGAA TGAG TTCAGGAGGCG CGGAGATTTGTACAG TERM 2124 2366802 - 2366834 + T 74 -8.5 -3.64822 | opp_overlap 2366811, overlap 2366809 AGGAGGCGCGGAGAT TTGTACAGACGTAGC GGT GCTACGTCTTGATAA TTTAGCTGGCGACGT TERM 2125 2366809 - 2366827 + T 95 -13.2 -3.33483 | opp_overlap 2366811, overlap 2366802 GCGGAGATTTGTACA GACGTAGC GGT GCTACGTC TTGATAATTTAGCTG TERM 2126 2366825 - 2366811 - T 75 -10 -2.89191 | opp_overlap 2366809 2366802 GGAGATTTGTACAGA CGTAGC GGT GCTACG TCTTGATAATTTAGC Ava_1905 2367819 - 2366836 - | RNA polymerase sigma factor TERM 2127 2367261 - 2367273 + g 85 -4.1 -5.52347 | CCAAGGTTTGAGCTA GTTCG CGT TGAAC TTTTTTGATTTTGTT Ava_1906 2370121 - 2368382 - | hypothetical protein TERM 2128 2368655 - 2368671 + g 76 -10.9 -2.62757 | overlap 2368648 TAAGGCGGTGATGCG TGTCCCA ATT TGGGACA TAACTTCATTATCTA TERM 2129 2369013 - 2369031 + g 71 -8.8 -3.24411 | opp_overlap 2369011 2369010, overlap 2369011 TTATTAATATAATTT TGGGGGCA AAC TGCCCGCA TATATTTAAGACCAT TERM 2130 2369916 - 2369897 - G 70 -9.2 -2.75708 | overlap 2369896 2369895 GTCCCGTAAAAAAGT GTCCTCCC AACT GGGGGGAC TAGCAATAATGCGCG Ava_1907 2371023 - 2370232 - | glutathione S-transferase-like protein TERM 2131 2370260 - 2370273 + g 70 -8.1 -3.60792 | overlap 2370256 ATAGACGTAGGCGCG CCACC GGTG GGTGG TTTACCAATTAGGGG Ava_1908 2371642 - 2372427 + | Beta-Ig-H3/fasciclin TERM 2132 2372509 - 2372535 + T 100 -14.6 -2.90941 | overlap 2372511 AGGTTATTCTCCTGA TAGCCGACTTTT TTA AAAGGTCGGCTA TCTATGACCTATCAT TERM 2133 2372511 - 2372533 + T 88 -12.8 -3.00498 | overlap 2372509 GTTATTCTCCTGATA GCCGACTTTT TTA AAAGGTCGGC TATCTATGACCTATC TERM 2134 2372580 - 2372609 + T 81 -8.6 -4.1421 | opp_overlap 2372580 2372581, overlap 2372581 ACTAATAGTAAAAAA TCCCCCTTCAAA AGTTAC TGTGAAGGGGGG TTATTATTTAATGTC TERM 2135 2372609 - 2372580 - T 95 -7.1 -5.28683 | opp_overlap 2372580 2372581, overlap 2372581 ACTAATAGTAAAAAA TCCCCCTTCAAAA GTTA CTGTGAAGGGGGG TTATTATTTAATGTC TERM 2136 2372608 - 2372581 - T 86 -10.6 -3.75583 | opp_overlap 2372580 2372581, overlap 2372580 CTAATAGTAAAAAAT CCCCCTTCAAAA GTTA CTGTGAAGGGGG GTTATTATTTAATGT TERM 2137 2372581 - 2372608 + T 76 -9.9 -3.07441 | opp_overlap 2372581 2372580, overlap 2372580 CTAATAGTAAAAAAT CCCCCTTCAAA AGTTAC TGTGAAGGGGG GTTATTATTTAATGT Ava_1909 2372818 - 2372660 - | hypothetical protein Ava_1910 2373260 - 2372913 - | translation initiation factor Sui1 Ava_1911 2373469 - 2374710 + | tryptophan synthase subunit beta TERM 2138 2374714 - 2374729 + F 71 -4.8 -4.6635 | opp_overlap 2374712 2374714, overlap 2374712 ATCCCACAATAAATC TATCTA AAGA TAGATA TTTTGTTAAAGATTT TERM 2139 2374812 - 2374836 + F 93 -12.2 -3.72324 | overlap 2374815 ATCAGACTTATAGGG GAGGGCGATC TGTGC GATCGCCTTC TTATTGATGAAAATC TERM 2140 2374815 - 2374833 + F 88 -10.3 -3.99374 | overlap 2374812 AGACTTATAGGGGAG GGCGATC TGTGC GATCGCC TTCTTATTGATGAAA Ava_1912 2374998 - 2375792 + | Allergen V5/Tpx-1 related TERM 2141 2375969 - 2375979 + F 73 -5.4 -4.57353 | GGTGACGAATTTTAA CCAT AAG ATGG TTTTATATGCTACAA TERM 2142 2376251 - 2376277 + G 76 -2.8 -5.31275 | opp_overlap 2376252, overlap 2376252 2376259 ACTCTTCTACAAAAC ACGCCACTGGTG ATT CACCGTTGTCGA TTTTTTCTCATCAGG Ava_1913 2376214 - 2376705 + | Allergen V5/Tpx-1 related Ava_1914 2376788 - 2377417 + | 3'-5' exonuclease TERM 2143 2377460 - 2377402 - T 72 -9.2 -2.74741 | opp_overlap 2377423 2377426, overlap 2377393 2377419 2377420 2377423 2377426 ATTACAGTTCAAGGA TTTGTTTGAACATTAAATTAATCACTAG TCA CTAGTCATTAGTCAAATGTCCAAACCAA TGACCAATGACCAAT TERM 2144 2377477 - 2377423 - T 75 -8.9 -3.61589 | opp_overlap 2377423 2377426, overlap 2377420 2377419 2377402 2377426 TGAACATTAAATTAA TCACTAGTCACTAGTCATTAGTC AAATGTCCA AACCAATGACCAATGACCAATGA CCAATGACTACTAAA Ava_1915 2377943 - 2377488 - | rhodanese-like protein Ava_1916 2380334 - 2378034 - | signal transduction protein TERM 2145 2380413 - 2380426 + H 80 -2.3 -5.66684 | opp_overlap 2380393 GACAAATACTCATAT CTCCC CGTA GGTAG TTTTTTTATGAGTTA Ava_1917 2380889 - 2381605 + | two component transcriptional regulator pdxA 2382930 - 2381842 - | 4-hydroxythreonine-4-phosphate dehydrogenase petM 2383211 - 2383315 + | cytochrome b6-f complex subunit PetM Ava_1920 2383580 - 2384566 + | 3-beta hydroxysteroid dehydrogenase/isomerase TERM 2146 2384751 - 2384741 - g 75 -8.2 -3.89971 | opp_overlap 2384738 2384741 TACAACGACATTAAA CCGG TAG CCGG TCGTGTTGCTATCGA ppnK 2384636 - 2385622 + | inorganic polyphosphate/ATP-NAD kinase Ava_1922 2385705 - 2386391 + | two component transcriptional regulator TERM 2147 2386541 - 2386524 - f 88 -11.3 -3.71848 | opp_overlap 2386526 TCTTTGGATGAAGAA GACGCGA TTAA TCGCGTC TCTACGGATGGTTAT Ava_1923 2386763 - 2387284 + | hypothetical protein Ava_1924 2387788 - 2388015 + | hypothetical protein TERM 2148 2388127 - 2388175 + T 86 -10.6 -3.79623 | gap 1, opp_overlap 2388127 2388128 2388132 2388133, overlap 2388133 2388138 CTCATTTAAATACAA GC-AAACTAGAAGAGCGAGTTGG ATGA TTAACTCGCTCTTTTAATTTAGC TTTCATGAACTTTTT TERM 2149 2388175 - 2388127 - T 83 -9.2 -3.84185 | gap 1, opp_overlap 2388127 2388133 2388138, overlap 2388128 2388132 2388133 CTCATTTAAATACAA GC-AAACTAGAAGAGCGAGTT GGATGATT AACTCGCTCTTTTAATTTAGC TTTCATGAACTTTTT TERM 2150 2388173 - 2388128 - T 73 -9.3 -2.90029 | opp_overlap 2388127 2388133 2388138, overlap 2388127 2388132 2388133 TCATTTAAATACAAG CAAACTAGAAGAGCGAGTT GGATGATT AACTCGCTCTTTTAATTTA GCTTTCATGAACTTT TERM 2151 2388169 - 2388132 - T 76 -7.9 -4.11501 | opp_overlap 2388127 2388133 2388138, overlap 2388128 2388127 2388133 TTAAATACAAGCAAA CTAGAAGAGCGAGTT GGATGATT AACTCGCTCTTTTAA TTTAGCTTTCATGAA TERM 2152 2388168 - 2388133 - T 74 -9.2 -3.05816 | opp_overlap 2388127 2388133 2388138, overlap 2388132 2388128 2388127 TAAATACAAGCAAAC TAGAAGAGCGAGTT GGATGATT AACTCGCTCTTTTA ATTTAGCTTTCATGA TERM 2153 2388133 - 2388168 + T 86 -12.8 -2.91807 | opp_overlap 2388133 2388132 2388128 2388127, overlap 2388127 2388138 TAAATACAAGCAAAC TAGAAGAGCGAGTTGG ATGA TTAACTCGCTCTTTTA ATTTAGCTTTCATGA TERM 2154 2388138 - 2388163 + T 95 -10.5 -4.59424 | opp_overlap 2388133 2388132 2388128 2388127, overlap 2388133 2388127 ACAAGCAAACTAGAA GAGCGAGTTGG ATGA TTAACTCGCTC TTTTAATTTAGCTTT Ava_1925 2388546 - 2388268 - | hypothetical protein trpC 2389751 - 2388861 - | indole-3-glycerol-phosphate synthase TERM 2155 2389570 - 2389552 - G 71 -3.1 -5.01732 | opp_overlap 2389565 AAGGCGGCGAAAAAA TCGCG GGTGGGTGG CGCGA TACGTGCTTTCTTTT TERM 2156 2389565 - 2389577 + g 79 -6.9 -4.68655 | opp_overlap 2389552 AATCGCGGGTGGGTG GCGCG ATA CGTGC TTTCTTTTGCAATTC TERM 2157 2389779 - 2389835 + r 79 -11 -3.09327 | overlap 2389784 TGTCAGTGGTCAGTT GTCATTAGTCCATAGTCAATGGTCAT TAGTT ATAGCCGTGGACTATGGACTATGGAC TGTTGACTAAACTAA Ava_1927 2391274 - 2389847 - | dihydrolipoamide dehydrogenase Ava_1928 2391463 - 2393304 + | SWIM Zn-finger Ava_1929 2393483 - 2393674 + | hypothetical protein TERM 2158 2393829 - 2393862 + T 95 -12.5 -4.15508 | opp_overlap 2393832, overlap 2393832 TCCAATCAATTTAGT AAATGGGGGTGGAAA AAGT TTTCCACCCCCATAA TTTTGGCAATTAATT TERM 2159 2393832 - 2393859 + T 100 -18.6 -3.09718 | opp_overlap 2393832, overlap 2393829 AATCAATTTAGTAAA TGGGGGTGGAAA AAGT TTTCCACCCCCA TAATTTTGGCAATTA TERM 2160 2393859 - 2393832 - T 100 -18.6 -3.80516 | opp_overlap 2393829 2393832 AATCAATTTAGTAAA TGGGGGTGGAAA AAGT TTTCCACCCCCA TAATTTTGGCAATTA Ava_1930 2395455 - 2393872 - | hypothetical protein TERM 2161 2395677 - 2395689 + r 76 -7.7 -4.14013 | GCAGAATCATTTTAA TCCCT GAT AGGGA TTTTAGAGGGTTTTA TERM 2162 2395750 - 2395762 + r 76 -7.7 -4.14013 | TATATTGGGTTTCAA TCCCT GAT AGGGA TTTTAGAGGGTTTTA TERM 2163 2395820 - 2395832 + r 76 -7.7 -4.14013 | AATACGTGGTTTCAA TCCCT GAT AGGGA TTTTAGAGGGTTTTA TERM 2164 2395891 - 2395903 + r 76 -7.7 -4.14013 | GGGAAGAAGTTTCAA TCCCT GAT AGGGA TTTTAGAGGGTTTTA TERM 2165 2395962 - 2395974 + r 76 -7.7 -4.14013 | CTCGCCCAGTTTCAA TCCCT GAT AGGGA TTTTAGAGGGTTTTA TERM 2166 2396031 - 2396043 + r 76 -7.7 -4.14013 | GCACCAGTGTTTCAA TCCCT GAT AGGGA TTTTAGAGGGTTTTA TERM 2167 2396101 - 2396113 + r 76 -7.7 -4.14013 | TTAGCATCGTTTCAA TCCCT GAT AGGGA TTTTAGAGGGTTTTA TERM 2168 2396172 - 2396184 + r 76 -7.7 -4.14013 | CCGTTTCGGTTTCAA TCCCT GAT AGGGA TTTTAGAGGGTTTTA TERM 2169 2396246 - 2396258 + r 76 -7.7 -4.14013 | GGATTCTTGTTTCAA TCCCT GAT AGGGA TTTTAGAGGGTTTTA TERM 2170 2396317 - 2396329 + r 76 -7.7 -4.14013 | GATGCTCTGTTTCAA TCCCT GAT AGGGA TTTTAGAGGGTTTTA TERM 2171 2396389 - 2396401 + r 76 -7.7 -4.14013 | ATAATTACGTTTCAA TCCCT GAT AGGGA TTTTAGAGGGTTTTA TERM 2172 2396460 - 2396472 + r 76 -7.7 -4.14013 | ACAATGAAGTTTCAA TCCCT GAT AGGGA TTTTAGAGGGTTTTA TERM 2173 2396531 - 2396543 + r 76 -7.7 -4.14013 | TGGTCGGAGTTTCAA TCCCT GAT AGGGA TTTTAGAGGGTTTTA TERM 2174 2396602 - 2396614 + r 76 -7.7 -4.14013 | opp_overlap 2396588 2396586 AGGGTTTGGTTTCAA TCCCT GAT AGGGA TTTTAGAGGGTTTTA TERM 2175 2396672 - 2396684 + r 76 -7.7 -4.14013 | CCGAGTTAGTTTCAA TCCCT GAT AGGGA TTTTAGAGGGTTTTA TERM 2176 2396744 - 2396756 + r 76 -7.7 -4.14013 | opp_overlap 2396735 2396733 2396732 AAAGCAGGGTTTCAA TCCCT GAT AGGGA TTTTAGAGGGTTTTA TERM 2177 2396817 - 2396829 + r 76 -7.7 -4.14013 | TTGAGAGTGTTTCAA TCCCT GAT AGGGA TTTTAGAGGGTTTTA TERM 2178 2396888 - 2396900 + r 76 -7.7 -4.14013 | TTCAAAATGTTTCAA TCCCT GAT AGGGA TTTTAGAGGGTTTTA TERM 2179 2396963 - 2396975 + r 76 -7.7 -4.14013 | CTTCCCCGGTTTCAA TCCCT GAT AGGGA TTTTAGAGGGTTTTA TERM 2180 2397036 - 2397048 + r 76 -7.7 -4.14013 | TCATATATGTTTCAA TCCCT GAT AGGGA TTTTAGAGGGTTTTA TERM 2181 2397108 - 2397120 + r 76 -7.7 -4.14013 | ATAACGTTGTTTCAA TCCCT GAT AGGGA TTTTAGAGGGTTTTA TERM 2182 2397179 - 2397191 + r 76 -7.7 -4.14013 | AGAAAGTAGTTTCAA TCCCT GAT AGGGA TTTTAGAGGGTTTTA TERM 2183 2397249 - 2397261 + r 76 -7.7 -4.14013 | TTTTGCGTGTTTCAA TCCCT GAT AGGGA TTTTAGAGGGTTTTA TERM 2184 2397320 - 2397332 + r 76 -7.7 -4.14013 | CCTCTTTAGTTTCAA TCCCT GAT AGGGA TTTTAGAGGGTTTTA TERM 2185 2397393 - 2397405 + r 76 -7.7 -4.14013 | GAGGGATTGTTTCAA TCCCT GAT AGGGA TTTTAGAGGGTTTTA TERM 2186 2397463 - 2397475 + r 76 -7.7 -4.14013 | AAATACTCGTTTCAA TCCCT GAT AGGGA TTTTAGAGGGTTTTA TERM 2187 2397533 - 2397545 + r 76 -7.7 -4.14013 | GATTCTCTGTTTCAA TCCCT GAT AGGGA TTTTAGAGGGTTTTA TERM 2188 2397607 - 2397619 + r 76 -7.7 -4.14013 | CTCAGAAAGTTTCAA TCCCT GAT AGGGA TTTTAGAGGGTTTTA TERM 2189 2397679 - 2397691 + r 76 -7.7 -4.14013 | AATCGGCGGTTTCAA TCCCT GAT AGGGA TTTTAGAGGGTTTTA TERM 2190 2397750 - 2397762 + r 76 -7.7 -4.14013 | CTAGTTTTGTTTCAA TCCCT GAT AGGGA TTTTAGAGGGTTTTA TERM 2191 2397821 - 2397833 + r 76 -7.7 -4.14013 | AATCATGTGTTTCAA TCCCT GAT AGGGA TTTTAGAGGGTTTTA TERM 2192 2397891 - 2397903 + r 76 -7.7 -4.14013 | ATTGAGTAGTTTCAA TCCCT GAT AGGGA TTTTAGAGGGTTTTA TERM 2193 2397960 - 2397972 + r 76 -7.7 -4.14013 | ATGGGAAAGTTTCAA TCCCT GAT AGGGA TTTTAGAGGGTTTTA TERM 2194 2398031 - 2398043 + r 76 -7.7 -4.14013 | CCGCGGACGTTTCAA TCCCT GAT AGGGA TTTTAGAGGGTTTTA TERM 2195 2398095 - 2398073 - R 80 -11.4 -2.53012 | opp_overlap 2398073, overlap 2398072 2398075 AACCCTATCACTAAG CAGGGAAAAA CAT TTTTCCCCTG TTTCAATCCCTGATA TERM 2196 2398073 - 2398095 + r 81 -9.2 -3.67296 | opp_overlap 2398073 2398072 2398075 AACCCTATCACTAAG CAGGGAAAAA CAT TTTTCCCCTG TTTCAATCCCTGATA TERM 2197 2398102 - 2398114 + r 76 -7.7 -4.14013 | TTTCCCCTGTTTCAA TCCCT GAT AGGGA TTTTAGAGGGTTTTA TERM 2198 2398174 - 2398186 + r 76 -7.7 -4.14013 | TCCAAGAAGTTTCAA TCCCT GAT AGGGA TTTTAGAGGGTTTTA TERM 2199 2398246 - 2398258 + r 76 -7.7 -4.14013 | GTGTACTCGTTTCAA TCCCT GAT AGGGA TTTTAGAGGGTTTTA TERM 2200 2398320 - 2398332 + r 76 -7.7 -4.14013 | CTGATTACGTTTCAA TCCCT GAT AGGGA TTTTAGAGGGTTTTA TERM 2201 2398389 - 2398401 + r 76 -7.7 -4.14013 | CTAATGATGTTTCAA TCCCT GAT AGGGA TTTTAGAGGGTTTTA TERM 2202 2398460 - 2398472 + r 76 -7.7 -4.14013 | AGTCTCGCGTTTCAA TCCCT GAT AGGGA TTTTAGAGGGTTTTA TERM 2203 2398531 - 2398543 + r 76 -7.7 -4.14013 | AGCGTCAGGTTTCAA TCCCT GAT AGGGA TTTTAGAGGGTTTTA TERM 2204 2398602 - 2398614 + r 76 -7.7 -4.14013 | GTACACTTGTTTCAA TCCCT GAT AGGGA TTTTAGAGGGTTTTA TERM 2205 2398674 - 2398686 + r 76 -7.7 -4.14013 | GTCTTTAAGTTTCAA TCCCT GAT AGGGA TTTTAGAGGGTTTTA Ava_1931 2400780 - 2398960 - | S-layer region-like TERM 2206 2399058 - 2399044 - G 76 -2.8 -5.31275 | GGTGACGAGAAAAAA GCCA GGGGTAA TGGC GATGTTGTCGTTGAC TERM 2207 2400559 - 2400524 - G 79 -8.4 -4.1466 | gap 1, opp_overlap 2400531, overlap 2400525 2400530 2400531 AGGGAAGTGGGAAAA TTCAAAGCCTCTCTCCT TTT AGGGGAGAGG-TTTGGA GAGGGGTTTTCCAGA TERM 2208 2400559 - 2400525 - G 74 -10 -3.08314 | opp_overlap 2400531, overlap 2400524 2400530 2400531 GGGAAGTGGGAAAAT TCAAAGCCTCTCTCCT TTT AGGGGAGAGGTTTGGA GAGGGGTTTTCCAGA TERM 2209 2400554 - 2400530 - G 77 -8.5 -3.92659 | opp_overlap 2400531, overlap 2400524 2400525 2400531 GTGGGAAAATTCAAA GCCTCTCTCCT TTT AGGGGAGAGGT TTGGAGAGGGGTTTT TERM 2210 2400553 - 2400531 - G 86 -12 -2.95113 | opp_overlap 2400531, overlap 2400530 2400524 2400525 TGGGAAAATTCAAAG CCTCTCTCCT TTT AGGGGAGAGG TTTGGAGAGGGGTTT TERM 2211 2400531 - 2400553 + g 100 -14.2 -3.5394 | opp_overlap 2400531 2400530 2400524 2400525 TGGGAAAATTCAAAG CCTCTCTCCT TTT AGGGGAGAGG TTTGGAGAGGGGTTT Ava_1932 2402232 - 2400940 - | hypothetical protein Ava_1933 2403863 - 2402391 - | GntR family transcriptional regulator TERM 2212 2404204 - 2404192 - g 73 -5.5 -4.62069 | opp_overlap 2404192 GCCGGATGTTAAAAA CCCTG CAA CAAGG TCTTGATATCTGCGT Ava_1934 2403972 - 2404643 + | hypothetical protein Ava_1935 2406358 - 2404790 - | transposase IS4 TERM 2213 2405313 - 2405326 + g 74 -6.7 -4.3129 | opp_overlap 2405313 GTTGCTTGCCAACTA GTTCC GGGG GGAAC TTTTCCTACTAAATC TERM 2214 2406608 - 2406594 - H 76 -9.2 -3.30124 | overlap 2406595 CGCCACTTGCTACAA CGCGGG GAA CCCGCA CAACACAGTGGCTCC TERM 2215 2406607 - 2406595 - H 76 -10.5 -2.57931 | overlap 2406594 GCCACTTGCTACAAC GCGGG GAA CCCGC ACAACACAGTGGCTC Ava_1936 2406729 - 2407283 + | pyridoxamine 5'-phosphate oxidase-related, FMN-binding Ava_1937 2407860 - 2407675 - | hypothetical protein Ava_1938 2408081 - 2407860 - | hypothetical protein Ava_1939 2408515 - 2408760 + | hypothetical protein TERM 2216 2408816 - 2408782 - T 72 -8 -3.71998 | overlap 2408785 TATTTAGCAATACAA TAACCTATCCATTC GCTTGTG GAGTGGATAGGCTA TGAGACCAAAGTAAA TERM 2217 2408813 - 2408785 - T 74 -7.5 -3.98627 | overlap 2408782 TTAGCAATACAATAA CCTATCCATTC GCTTGTG GAGTGGATAGG CTATGAGACCAAAGT Ava_1940 2412671 - 2409009 - | hydrogenobyrinic acid a,c-diamide cobaltochelatase TERM 2218 2412868 - 2412893 + H 91 -5.4 -5.82388 | gap 1, opp_overlap 2412870 2412871, overlap 2412871 CATACAGACTTGCAG AACCCCTCGGT TAACC ACCG-GGGGTC TTTTTTTTAACCTTT TERM 2219 2412871 - 2412891 + H 95 -10.4 -4.53853 | opp_overlap 2412870 2412871, overlap 2412868 ACAGACTTGCAGAAC CCCTCGGT TAACC ACCGGGGG TCTTTTTTTTAACCT Ava_1941 2412985 - 2414763 + | ABC transporter, transmembrane region TERM 2220 2415557 - 2415581 + G 71 -4.9 -4.63184 | TCGTGATGCCAACGT TGAAGCCGTAG CAA TTACGGCGGCA TTTTTACCATCAATT Ava_1942 2414808 - 2416592 + | ABC transporter, transmembrane region TERM 2221 2416724 - 2416695 - f 100 -8 -5.60864 | gap 1 GATATATGAAAAAAA TCACCTCTG-GAT TTTCT ACCTCAGAGGTGA TTAGCAAAGACATCT TERM 2222 2416984 - 2416950 - f 100 -13.6 -3.19192 | opp_overlap 2416949 TTTGACGGAACCTAA CCCCAACCCCTTCCCT ACA AGGGAAGGGGCTGACA ATCTATAACTGAGTA TERM 2223 2417021 - 2417043 + F 100 -13.4 -3.53761 | overlap 2417009 AATCAGGTTTTTAAG CCTCTACCCG CGT CGGGGAGAGG TTTGGAGAGGGGTTC Ava_1943 2417779 - 2418489 + | hypothetical protein Ava_1944 2418915 - 2419631 + | two component transcriptional regulator TERM 2224 2420675 - 2420654 - g 70 -7.3 -3.82031 | TTAACTATCACTAAA CACCTAGTA GAAC TACAAGGTG GCGAAATTCACTTAG Ava_1945 2419628 - 2420743 + | periplasmic sensor Signal transduction histidine kinase TERM 2225 2420760 - 2420784 + F 85 -11.5 -3.33737 | opp_overlap 2420759 2420762 CAATAGTTTATAGAT CACCGACTTTT TAA AAAAGTCGGGG TTCTGAGCGTTCATA TERM 2226 2420782 - 2420762 - f 85 -12.7 -2.69977 | opp_overlap 2420760, overlap 2420759 ATAGTTTATAGATCA CCGACTTTT TAA AAAAGTCGG GGTTCTGAGCGTTCA Ava_1946 2420860 - 2421870 + | delta-aminolevulinic acid dehydratase Ava_1947 2422022 - 2422204 + | threonyl-tRNA synthetase Ava_1948 2422350 - 2423399 + | cobalamin synthesis protein/P47K folE 2423498 - 2424148 + | GTP cyclohydrolase I Ava_1950 2424912 - 2424607 - | hypothetical protein TERM 2227 2425708 - 2425723 + G 70 -7.6 -3.67296 | TTTTCGGGGTCGTCC CTTCCA AATT TGGAAG TTTCGCTCGATGGTG Ava_1951 2425469 - 2426146 + | sugar transferase TERM 2228 2426216 - 2426237 + T 100 -13 -4.93696 | opp_overlap 2426216 ACCTATTACCGAAAA CACCGCCC ACAAGG GGGCGGTG TTTTTCATCTTTGCC TERM 2229 2426237 - 2426216 - T 95 -13 -4.21462 | opp_overlap 2426216 ACCTATTACCGAAAA CACCGCCC ACAAGG GGGCGGTG TTTTTCATCTTTGCC Ava_1952 2427558 - 2426278 - | DEAD/DEAH box helicase-like TERM 2230 2427824 - 2427781 - R 100 -14.2 -3.4072 | gap 1, opp_overlap 2427791, overlap 2427785 2427789 2427791 2427810 2427812 TACGTCTGATGACAA GTCATAGATACCCGACTTTTT CAA AAAAAGTCGGGTATCTG-AAC ACCCACAACCTGGGA TERM 2231 2427821 - 2427785 - R 100 -18.3 -2.61548 | opp_overlap 2427791, overlap 2427781 2427789 2427791 2427810 2427812 TCTGATGACAAGTCA TAGATACCCGACTTTTT CAA AAAAAGTCGGGTATCTG AACACCCACAACCTG TERM 2232 2427817 - 2427789 - R 100 -17.7 -2.96979 | opp_overlap 2427791, overlap 2427785 2427781 2427791 2427810 2427812 ATGACAAGTCATAGA TACCCGACTTTTT CAA AAAAAGTCGGGTA TCTGAACACCCACAA TERM 2233 2427815 - 2427791 - R 100 -15.9 -3.03453 | opp_overlap 2427791, overlap 2427789 2427785 2427781 2427810 2427812 GACAAGTCATAGATA CCCGACTTTTT CAA AAAAAGTCGGG TATCTGAACACCCAC TERM 2234 2427791 - 2427815 + r 100 -15.9 -2.87132 | opp_overlap 2427789 2427785 2427781 2427791 2427810 2427812 GACAAGTCATAGATA CCCGACTTTTT CAA AAAAAGTCGGG TATCTGAACACCCAC TERM 2235 2427830 - 2427810 - R 74 -2.6 -5.40474 | gap 1, opp_overlap 2427791 2427826, overlap 2427791 2427789 2427785 2427781 2427812 2427826 ACTTTTTCAAAAAAA GTCGGGTAT CTGA ACACCC-AC AACCTGGGATATTTC Ava_1953 2428494 - 2427844 - | hydrogenase accessory protein TERM 2236 2428172 - 2428161 - G 71 -4.4 -4.88228 | opp_overlap 2428161 AGCCAATAGTAAAAA TAGC GATC GCTA TCTCTGCACCTGGTA TERM 2237 2428713 - 2428678 - R 86 -8.4 -4.41348 | opp_overlap 2428689, overlap 2428681 GTTGTGCCAAATAAA TGATGTAGAAACGTTG TATG CAACGTCTCTACAGTA CAGAATAAAGTGCAT TERM 2238 2428710 - 2428681 - R 100 -14.5 -3.18452 | opp_overlap 2428689, overlap 2428678 GTGCCAAATAAATGA TGTAGAAACGTTG TATG CAACGTCTCTACA GTACAGAATAAAGTG Ava_1954 2430169 - 2428763 - | periplasmic sensor Signal transduction histidine kinase Ava_1955 2432077 - 2430254 - | ABC transporter, transmembrane region Ava_1956 2432903 - 2432238 - | hypothetical protein Ava_1957 2433225 - 2434223 + | UDP-galactose 4-epimerase TERM 2239 2434289 - 2434338 + T 100 -10.3 -5.06414 | gap 1, opp_overlap 2434293 2434294 2434296, overlap 2434294 2434295 2434297 2434301 2434303 AGGAGTACAAAATTC AAAATTACTAGATACCCGACTTCT TGA AGAAGTCGGGTATCTA-TGGCTTG TTTTTATTGCGCCAA TERM 2240 2434334 - 2434293 - T 95 -11.1 -4.4595 | gap 1, opp_overlap 2434289 2434294 2434295 2434297 2434301 2434303, overlap 2434294 2434296 GTACAAAATTCAAAA TTACTAGATACCCGACTTCT TGA AGAAGTCGGGTATCTA-TGG CTTGTTTTTATTGCG TERM 2241 2434294 - 2434335 + T 100 -12.5 -4.63592 | gap 1, opp_overlap 2434294 2434293 2434296, overlap 2434289 2434295 2434297 2434301 2434303 TACAAAATTCAAAAT TAC-TAGATACCCGACTTCT TGA AGAAGTCGGGTATCTATGGC TTGTTTTTATTGCGC TERM 2242 2434333 - 2434294 - T 100 -14.6 -3.26486 | gap 1, opp_overlap 2434289 2434294 2434295 2434297 2434301 2434303, overlap 2434293 2434296 TACAAAATTCAAAAT TACTAGATACCCGACTTCT TGA AGAAGTCGGGTATCTA-TG GCTTGTTTTTATTGC TERM 2243 2434295 - 2434334 + T 100 -16 -3.3707 | gap 1, opp_overlap 2434294 2434293 2434296, overlap 2434294 2434289 2434297 2434301 2434303 ACAAAATTCAAAATT AC-TAGATACCCGACTTCT TGA AGAAGTCGGGTATCTATGG CTTGTTTTTATTGCG TERM 2244 2434332 - 2434296 - T 100 -19.7 -3.17699 | opp_overlap 2434295 2434294 2434289 2434297 2434301 2434303, overlap 2434294 2434293 CAAAATTCAAAATTA CTAGATACCCGACTTCT TGA AGAAGTCGGGTATCTAT GGCTTGTTTTTATTG TERM 2245 2434297 - 2434331 + T 100 -23.2 -2.82422 | opp_overlap 2434296 2434294 2434293, overlap 2434295 2434294 2434289 2434301 2434303 AAAATTCAAAATTAC TAGATACCCGACTTCT TGA AGAAGTCGGGTATCTA TGGCTTGTTTTTATT TERM 2246 2434301 - 2434327 + T 100 -18.2 -2.99842 | opp_overlap 2434296 2434294 2434293, overlap 2434297 2434295 2434294 2434289 2434303 TTCAAAATTACTAGA TACCCGACTTCT TGA AGAAGTCGGGTA TCTATGGCTTGTTTT TERM 2247 2434303 - 2434325 + T 100 -16.4 -3.03854 | opp_overlap 2434296 2434294 2434293, overlap 2434301 2434297 2434295 2434294 2434289 CAAAATTACTAGATA CCCGACTTCT TGA AGAAGTCGGG TATCTATGGCTTGTT Ava_1958 2434967 - 2434329 - | hypothetical protein Ava_1959 2436261 - 2434990 - | hypothetical protein Ava_1960 2436436 - 2437437 + | peptidases M20 and M28 Ava_1961 2437725 - 2438168 + | hypothetical protein Ava_1962 2438375 - 2439010 + | thymidylate kinase TERM 2248 2439620 - 2439594 - f 91 -6 -5.50774 | TAGAATAAATAAAAA TAGACAAAACGT CTT AAATTTTGTCTA AAATATATCTTTACC TERM 2249 2440119 - 2440106 - g 70 -5.9 -4.41047 | opp_overlap 2440106 AGCTGTTAAGCAAAA CCGAG TAGC CCCGG CTTATCTATTTGCGG Ava_1963 2440029 - 2440991 + | DNA polymerase III subunit delta' Ava_1964 2441067 - 2441600 + | pyridoxamine 5'-phosphate oxidase-related, FMN-binding TERM 2250 2441732 - 2441761 + T 84 -12.3 -2.89569 | overlap 2441729 CACTTTATTCTGTAC TGTAGAGACGTTG CATA CAAAGTCTCTACA TCATTCATTTGGCGC Ava_1965 2442319 - 2441876 - | hypothetical protein coaD 2443092 - 2442454 - | phosphopantetheine adenylyltransferase Ava_1967 2443192 - 2444040 + | prolipoprotein diacylglyceryl transferase TERM 2251 2444165 - 2444142 - f 100 -7.4 -5.95286 | overlap 2444143 ACCAAAAATAAAAAA TGCCCCAGAA TGAT TTCTAGGGCT TAACCAGGGTGCATC TERM 2252 2444164 - 2444143 - f 89 -10.9 -4.13511 | overlap 2444142 CCAAAAATAAAAAAT GCCCCAGAA TGAT TTCTAGGGC TTAACCAGGGTGCAT TERM 2253 2444238 - 2444253 + F 88 -4.8 -5.76633 | ATACCGAGCAAATTC TCAAAA AATT TTTTGA TTTTTTTCTGTCTAC TERM 2254 2444407 - 2444395 - g 77 -6.3 -4.70879 | GTTAAAGCCCAAAAA CTACT GTC AGTAG CAGATGTGATTTTAT Ava_1968 2444302 - 2445087 + | precorrin-4 C11-methyltransferase Ava_1969 2445141 - 2445779 + | PAP fibrillin Ava_1970 2446250 - 2445837 - | hypothetical protein TERM 2255 2446309 - 2446272 - R 86 -10.6 -3.82218 | opp_overlap 2446272 2446272 ATGTATAGCATTAAA GGGGCGATCGCCTCTG GTTGCT CAAAGACAATCGCCTC TAAATTACTTCTGCT Ava_1971 2446613 - 2446314 - | hypothetical protein TERM 2256 2446568 - 2446546 - G 100 -12.8 -3.76373 | GCTTCAATACGCAAA TCTTCCTCGG TTT CCAAGGAAGA TAAGTCTACATGGCT Ava_1972 2446798 - 2447259 + | adenylate cyclase TERM 2257 2447303 - 2447323 + T 78 -9 -3.70102 | gap 1, opp_overlap 2447303 2447302, overlap 2447301 2447303 AAAAAAGTATACAAG CCCC-CGGA TTTA TCCGTGGGG TATTTAATTTTGAAT TERM 2258 2447322 - 2447303 - T 73 -9.2 -2.83042 | opp_overlap 2447301 2447303 2447303, overlap 2447302 AAAAAAGTATACAAG CCCCCGGA TTTA TCCGTGGG GTATTTAATTTTGAA TERM 2259 2447303 - 2447322 + T 73 -9.2 -2.80977 | opp_overlap 2447303 2447302, overlap 2447303 2447301 AAAAAAGTATACAAG CCCCCGGA TTTA TCCGTGGG GTATTTAATTTTGAA TERM 2260 2447386 - 2447412 + T 100 -13.8 -3.4149 | opp_overlap 2447380, overlap 2447384 GCGAAGCGACTTGAC TCCCCGACTTCT TCA AGAAATCGGGGA TATTTAGCATTAGAT Ava_1973 2447922 - 2447422 - | hypothetical protein Ava_1974 2449785 - 2448511 - | hypothetical protein TERM 2261 2448918 - 2448932 + g 80 -2.8 -5.53991 | TAGCAATGAGTTTAC CAATGC CTA GAATTG TTTTTTTACTGGCTA TERM 2262 2449680 - 2449662 - G 80 -8.9 -3.98083 | opp_overlap 2449662, overlap 2449654 TAGTTAAGCTATAAA CTAGCCA AACAG TGGCTAG TTGTGTCATCCAAGT TERM 2263 2449662 - 2449680 + g 73 -8.9 -3.54653 | opp_overlap 2449654 2449662 TAGTTAAGCTATAAA CTAGCCA AACAG TGGCTAG TTGTGTCATCCAAGT TERM 2264 2449947 - 2449922 - R 73 -6.9 -4.13225 | overlap 2449923 AAAAAAAGCTAGAAA TTTCTTCACCC CGTC GGATGAAGAAT AATAAGACTTAAGAG TERM 2265 2449946 - 2449923 - R 78 -10.4 -3.05495 | overlap 2449922 AAAAAAGCTAGAAAT TTCTTCACCC CGTC GGATGAAGAA TAATAAGACTTAAGA Ava_1975 2450423 - 2449956 - | MarR family transcriptional regulator Ava_1976 2452180 - 2450555 - | glycosyl transferase family protein Ava_1977 2452282 - 2452935 + | hypothetical protein TERM 2266 2453308 - 2453292 - g 71 -2.2 -5.10767 | overlap 2453293 2453294 TACCCAAGAGAAAAA GGGCTT TGCTG AAGCCA AGCTGAAAAAAGATG Ava_1978 2453059 - 2453568 + | hypothetical protein Ava_1979 2453669 - 2454556 + | hypothetical protein TERM 2267 2454598 - 2454562 - f 80 -11.1 -3.20164 | opp_overlap 2454564 2454569, overlap 2454564 2454569 GGAGATTTAAGCTAA GAGGTAATAGCAAAAAT TCT ACCTTTGCTATTACCTG TTAAGTAACTCACTG TERM 2268 2454564 - 2454596 + F 74 -9.4 -3.09878 | opp_overlap 2454562 2454564 2454569, overlap 2454569 AGATTTAAGCTAAGA GGTAATAGCAAA AATTCTACC TTTGCTATTACC TGTTAAGTAACTCAC TERM 2269 2454596 - 2454564 - f 100 -13.7 -3.16117 | opp_overlap 2454564 2454569, overlap 2454562 2454569 AGATTTAAGCTAAGA GGTAATAGCAAAAAT TCT ACCTTTGCTATTACC TGTTAAGTAACTCAC TERM 2270 2456479 - 2456505 + G 74 -8 -3.98256 | opp_overlap 2456484 2456491, overlap 2456497 TGCCGCGCCTCCTGT GGAAACCAAAGA GAA TCTCTGGATTCC TGTTTTTAATGGAGA TERM 2271 2457669 - 2457657 - g 73 -3.5 -4.99435 | TTGAACAAGTAAAAA TTTAT GAA ATAAA AATTCAGGCTTATGG TERM 2272 2457709 - 2457727 + G 77 -6.1 -4.70626 | opp_overlap 2457702 2457707 TCAAGCGATTGAAGC TGTCAAT ACTGC ATTGACA TTTTTAAAATTATTA TERM 2273 2458119 - 2458100 - g 76 -8 -4.22927 | CGACTAACAGATAAA TTCAATTC TGAA GAATTGAA AGCTAAAATAACAGA Ava_1980 2454971 - 2460676 + | Serine/threonine protein kinase and Signal transduction histidine kinase (STHK) with GAF sensor Ava_1981 2462099 - 2460693 - | cytochrome P450 Ava_1982 2463089 - 2462121 - | Terpene synthase, metal-binding Ava_1983 2465019 - 2464249 - | hypothetical protein TERM 2274 2465330 - 2465303 - R 93 -6.4 -5.72053 | gap 1, overlap 2465306 TAAGCAAACAAAAAA TAATCCAGCAGAT TTA ATCTGCTGGAG-A TTCGACTATCTAAAG TERM 2275 2465328 - 2465306 - R 100 -15 -4.88687 | overlap 2465303 GCAAACAAAAAATAA TCCAGCAGAT TTA ATCTGCTGGA GATTCGACTATCTAA Ava_1984 2465696 - 2465367 - | RNA-binding region RNP-1 TERM 2276 2465773 - 2465763 - R 73 -5.4 -4.61873 | TTTTATAAATCAAAA TGAG TCA CTCA ACCGAAAATAATTCT Ava_1985 2466791 - 2465919 - | inositol monophosphatase Ava_1986 2467648 - 2466788 - | PfkB TERM 2277 2467649 - 2467681 + H 81 -8.6 -4.07568 | gap 1, opp_overlap 2467659 2467668, overlap 2467657 2467659 AGAGTGATTTGTCAT TTGTTAGAGACGCGA TTAA TCGCGTCTGT-ACAA TTTTCAGAAACGCGA TERM 2278 2467657 - 2467707 + H 100 -15.8 -2.83701 | gap 2, opp_overlap 2467659 2467668 2467692, overlap 2467649 2467659 TTGTCATTTGTTAGA GACGCGATTAATCGCG--TCTGTA CAATT TTCAGAAACGCGATTAATCGCGTC TGTACTAAATATTTA TERM 2279 2467705 - 2467659 - H 100 -16.8 -2.87931 | opp_overlap 2467649 2467657 2467659, overlap 2467668 2467692 GTCATTTGTTAGAGA CGCGATTAATCGCGTCTGTACA ATT TTCAGAAACGCGATTAATCGCG TCTGTACTAAATATT TERM 2280 2467659 - 2467705 + H 88 -12.6 -2.96042 | gap 2, opp_overlap 2467659 2467668 2467692, overlap 2467649 2467657 GTCATTTGTTAGAGA CGCGATTAATCGCG--TCTGTA CAATT TTCAGAAACGCGATTAATCGCG TCTGTACTAAATATT TERM 2281 2467705 - 2467692 - H 77 -8.1 -3.90328 | opp_overlap 2467659 2467657, overlap 2467668 2467659 TACAATTTTCAGAAA CGCGA TTAA TCGCG TCTGTACTAAATATT Ava_1987 2467743 - 2468600 + | hypothetical protein TERM 2282 2468658 - 2468646 - T 73 -3.3 -5.1356 | overlap 2468649 GTTCACTAAGAAAAA GAACG CAG CGATC GCTTGAGGGCGAAGC TERM 2283 2468677 - 2468649 - T 78 -6.7 -4.66002 | gap 1, overlap 2468646 CACTAAGAAAAAGAA CGCAGCGATCGC TTGAGG GCGAA-GCTGCG AGAATTAAATACAGA Ava_1988 2468992 - 2468795 - | hypothetical protein trmE 2469195 - 2470586 + | tRNA modification GTPase TrmE Ava_1990 2471981 - 2471052 - | metallophosphoesterase TERM 2284 2471247 - 2471257 + g 82 -8.2 -4.24606 | opp_overlap 2471246 GTTTAGGTAAACTAT GCCC TCT GGGC TTTTAAATATGGGTT TERM 2285 2472487 - 2472459 - g 86 -8.9 -4.25283 | AGTTGTCCACCAAAA GAATTTGCCGCTT TTA AAGCAGCACATCC CGATCATTTAGTAGT TERM 2286 2472788 - 2472802 + G 73 -5.6 -4.41548 | opp_overlap 2472784 ATGTGAAAGCAGTGT CTTGCG TCA CGCTAG TTTTATCGGCTCTAC Ava_1991 2472129 - 2473103 + | quinolinate synthetase TERM 2287 2473156 - 2473136 - T 89 -10.5 -4.13995 | opp_overlap 2473136 TTTTTACAAATTAAA TGGGGAAAC GTG ATTTCCCCA TTTTCCATATCATCT TERM 2288 2473136 - 2473156 + T 86 -9.8 -4.2535 | opp_overlap 2473136 TTTTTACAAATTAAA TGGGGAAA CGTGA TTTCCCCA TTTTCCATATCATCT Ava_1992 2474184 - 2473246 - | hypothetical protein TERM 2289 2473512 - 2473524 + g 78 -4.1 -5.10029 | TATTAAAAGCCTTGT TCAGT ACT GCTGA TTTTTTCCCGTTAGT TERM 2290 2474343 - 2474364 + H 80 -8.7 -3.91028 | opp_overlap 2474347, overlap 2474345 AGTTGTCAGTTGTTA GAGACGCGA TTAA TCGCGTCTG TTGTTAATTTCAGTT TERM 2291 2474345 - 2474362 + H 84 -11.3 -3.53094 | opp_overlap 2474347, overlap 2474343 TTGTCAGTTGTTAGA GACGCGA TTAA TCGCGTC TGTTGTTAATTTCAG Ava_1993 2474571 - 2475152 + | metal dependent phosphohydrolase Ava_1994 2476248 - 2475232 - | ribose-phosphate pyrophosphokinase TERM 2292 2476186 - 2476199 + g 71 -6.7 -4.14392 | TTCAGTCAGTCCTGT TGCAG TTGG CTGCA TTTTAAAAGTTGCAG TERM 2293 2476609 - 2476592 - H 76 -4.2 -5.10968 | opp_overlap 2476592 ATTAACAGACAAAAA CCTTAA CGAATT TTAAGG GTTCATTCAATATTC TERM 2294 2476869 - 2476845 - H 73 -8.7 -3.29096 | CCCAGCAAGCAGTAA TTTACTCTGAA GGT TACAGAGTAAA GATGCGACGATGCTC Ava_1995 2477637 - 2479319 + | Serine/threonine protein kinase TERM 2295 2479567 - 2479533 - g 78 -9.4 -3.61983 | opp_overlap 2479533 2479557 GGAACTGATACAGAA GCTGGCAAAACTGC TTTGACT ACAGTTTTGGCAGC TTACTGTCAGAAATA TERM 2296 2479533 - 2479567 + G 71 -8.7 -3.2614 | opp_overlap 2479533, overlap 2479557 GGAACTGATACAGAA GCTGGCAAAACTG CTTTGACTA CAGTTTTGGCAGC TTACTGTCAGAAATA bioD 2479494 - 2480171 + | dithiobiotin synthetase Ava_1997 2480380 - 2480754 + | hypothetical protein Ava_1998 2481259 - 2482353 + | DRTGG Ava_1999 2482479 - 2482982 + | hypothetical protein TERM 2297 2483073 - 2483084 + G 81 -7.2 -4.65153 | overlap 2483072 TCTTATATTCTATTG CCGC AGCT GCGG TTTTAATTTATCTGC Ava_2000 2483048 - 2483443 + | hypothetical protein TERM 2298 2483627 - 2483617 - g 71 -6.8 -4.18401 | overlap 2483607 TCAGAGACCTGAAAA GTCG TTA CGAC CTCAAAGATACTCAG Ava_2001 2483526 - 2484017 + | nucleotide-binding protein TERM 2299 2484203 - 2484180 - T 78 -6 -4.84527 | gap 1, opp_overlap 2484180 TCCAGACATGAAAAA GCGGGTGAGAT ATC ATATC-CCCGC TTTTTTGTTTGACAA TERM 2300 2484180 - 2484203 + T 91 -6 -5.63517 | gap 1, opp_overlap 2484180 TCCAGACATGAAAAA GCGGGTGAGAT ATC ATATC-CCCGC TTTTTTGTTTGACAA Ava_2002 2484972 - 2484415 - | glutathione S-transferase-like protein TERM 2301 2484717 - 2484738 + g 100 -12.3 -3.64609 | overlap 2484704 2484702 GGGCGAGTATCCCTC GCTCCTCTG GTGA CAGGGGAGC TTTACCGTACTTATC Ava_2003 2485449 - 2484985 - | hypothetical protein TERM 2302 2485018 - 2485029 + g 75 -5.8 -4.74215 | GTGGGAGTGCTGTTT GACG TTAT CGTC TTTTGTTACTACTCT TERM 2303 2485592 - 2485616 + H 84 -9.9 -3.77831 | opp_overlap 2485581 2485593, overlap 2485593 GAAACCCCTCTCCAA ACCTCTCCCCG AAG CGGAGAGAGGC TTTGAATCTTGCTCC TERM 2304 2485615 - 2485593 - H 100 -15.6 -3.5394 | opp_overlap 2485592 2485593, overlap 2485581 AAACCCCTCTCCAAA CCTCTCCCCG AAG CGGAGAGAGG CTTTGAATCTTGCTC TERM 2305 2485593 - 2485615 + H 90 -13.4 -2.86217 | opp_overlap 2485593 2485581, overlap 2485592 AAACCCCTCTCCAAA CCTCTCCCCG AAG CGGAGAGAGG CTTTGAATCTTGCTC Ava_2004 2486012 - 2486722 + | TPR repeat-containing protein Ava_2005 2487289 - 2486879 - | hypothetical protein TERM 2306 2487572 - 2487586 + r 74 -5 -4.78933 | opp_overlap 2487572, overlap 2487582 GTAAAGCACAACTTA CTGTAT GAT GTACAG TTTTGTATGTTTTGA TERM 2307 2487921 - 2487891 - R 100 -16.4 -5.24515 | opp_overlap 2487891 2487893 2487896 2487899 AACAAACAAACAAAA CACAACAATCCAAA GTA TCTGGATTGTTGTG TTCAGTAATAAGAAG TERM 2308 2487891 - 2487921 + r 100 -14.2 -3.09516 | opp_overlap 2487891, overlap 2487893 2487896 2487899 AACAAACAAACAAAA CACAACAATCCAAA GTA TCTGGATTGTTGTG TTCAGTAATAAGAAG TERM 2309 2487893 - 2487919 + r 79 -11 -3.10796 | opp_overlap 2487891, overlap 2487891 2487896 2487899 CAAACAAACAAAACA CAACAATCCAAA GTA TCTGGATTGTTG TGTTCAGTAATAAGA psaM 2488144 - 2488022 - | photosystem I reaction center subunit XII TERM 2310 2489009 - 2488999 - g 71 -6.8 -4.08767 | opp_overlap 2489006, overlap 2489000 GCGAGTGGGGCAAAA TCCC CAG GGGA AGCGGTGACTTCCCT Ava_2006 2488306 - 2489547 + | carbohydrate kinase, FGGY Ava_2007 2490787 - 2489825 - | ATPase, BadF/BadG/BcrA/BcrD type Ava_2008 2492060 - 2490789 - | putative transmembrane permease TERM 2311 2491936 - 2491947 + g 71 -4.4 -4.84017 | GCAATTTGTGTATTA GCTA TTCC TAGC TTTTTGTAGAAAATT Ava_2009 2492283 - 2492558 + | transglycosylase-associated protein TERM 2312 2492663 - 2492635 - T 88 -5.4 -5.49568 | gap 1, overlap 2492637 AATTTAAAACAAAAA TACTCCACT-CTT TTAC AAGTAGTGGAGTT AAAAAATACAAAATA TERM 2313 2492661 - 2492637 - T 82 -8 -4.3613 | gap 1, overlap 2492635 TTTAAAACAAAAATA CTCCACT-CTT TTAC AAGTAGTGGAG TTAAAAAATACAAAA Ava_2010 2493061 - 2492879 - | CsbD-like Ava_2011 2493248 - 2494132 + | hypothetical protein TERM 2314 2494169 - 2494150 - g 71 -2 -5.24416 | opp_overlap 2494166 GAAGCAGAACAAAAA TCAGCACG TTCT CTAGCTGA GTGGGTAACATTCGG Ava_2012 2494129 - 2494527 + | hypothetical protein TERM 2315 2494572 - 2494541 - T 100 -13.2 -4.81523 | opp_overlap 2494546, overlap 2494546 AATTAAAAAGCAAAA CAAAACCCTAACCA CAAA TGGTTAGGGTTTCA GTTAAATATTATATA TERM 2316 2494567 - 2494546 - T 100 -13.1 -5.24291 | opp_overlap 2494546, overlap 2494541 AAAAGCAAAACAAAA CCCTAACCA CAAA TGGTTAGGG TTTCAGTTAAATATT TERM 2317 2494546 - 2494567 + T 100 -13.1 -3.78067 | opp_overlap 2494541 2494546 AAAAGCAAAACAAAA CCCTAACCA CAAA TGGTTAGGG TTTCAGTTAAATATT Ava_2013 2495102 - 2494737 - | hypothetical protein Ava_2014 2495660 - 2495121 - | hypothetical protein Ava_2015 2496046 - 2495810 - | DNA-directed RNA polymerase subunit omega Ava_2016 2496225 - 2496644 + | Beta-Ig-H3/fasciclin Ava_2017 2498290 - 2496824 - | Alpha amylase, catalytic region TERM 2318 2497932 - 2497898 - G 82 -2.3 -5.63236 | gap 2 ATGGAAAAAGAAAAA TCCTCGACTGGAATGAT TAA AT-ACGCCA-TCGAGGA CAACTTTAATATTGC TERM 2319 2498536 - 2498478 - H 100 -16.4 -3.91191 | gap 2, opp_overlap 2498480, overlap 2498480 2498507 2498508 CAAAAAATACAAATA TATGTAGGGTGGGCATTGCCCACC GAAAACCGGATAT GGTGGGCAATGCCCACCCTACA-- GATACTTACTCTTAT TERM 2320 2498536 - 2498480 - H 100 -28.4 -3.49387 | opp_overlap 2498480, overlap 2498478 2498507 2498508 AAAAATACAAATATA TGTAGGGTGGGCATTGCCCACC GAAAACCGGATAT GGTGGGCAATGCCCACCCTACA GATACTTACTCTTAT TERM 2321 2498480 - 2498538 + H 100 -18.5 -2.87252 | gap 2, opp_overlap 2498478 2498480 2498507 2498508 AAAAATACAAATATA --TGTAGGGTGGGCATTGCCCACCGAA AACCGGA TATGGTGGGCAATGCCCACCCTACAGA TACTTACTCTTATTC TERM 2322 2500484 - 2500495 + G 73 -7.2 -4.17023 | TCCTGGTACATTTGA CCCC AAAT GGGG TTTTGGGCTGATTAA Ava_2018 2498796 - 2500532 + | peptidase S8 and S53, subtilisin, kexin, sedolisin Ava_2019 2500559 - 2500888 + | hypothetical protein TERM 2323 2501595 - 2501619 + G 72 -7.2 -4.07568 | opp_overlap 2501593 2501595 TTGGTTTAATGAAGA TCGATAACTC TGGAC GAGTCATCGA TTTTAGCGAAAAACC TERM 2324 2501619 - 2501595 - g 74 -9.4 -3.23853 | opp_overlap 2501595, overlap 2501593 TTGGTTTAATGAAGA TCGATAACTC TGGAC GAGTCATCGA TTTTAGCGAAAAACC TERM 2325 2502261 - 2502247 - g 78 -5.6 -4.88736 | CATCATCGATAAAAA TGCCCG CAT CGGTCA CGATGTCAAAATTAT glgC 2501099 - 2502388 + | glucose-1-phosphate adenylyltransferase TERM 2326 2502498 - 2502457 - f 72 -9.6 -2.64912 | gap 3, overlap 2502453 2502456 2502488 CCGTGAACGGAGAAC GGCAGTTCGCAATC--GACGC AAA GCGCCAAGACTGCGA-CTGCC TCACAGTCAACAGTC TERM 2327 2502674 - 2502631 - g 91 -11.8 -3.45737 | gap 1, opp_overlap 2502630 2502628 CAATTAGTAGCACAA TGCCCCCAGATG-CAGCTG ATTTCCA CAGATGCCATCAGGGGGCA ACTGTTTGGCTCAGA Ava_2021 2502556 - 2503107 + | hypothetical protein Ava_2022 2503228 - 2504229 + | heat shock protein DnaJ-like TERM 2328 2504338 - 2504282 - T 70 -6.6 -4.11394 | opp_overlap 2504282 2504282 2504299, overlap 2504283 ACTTGATTTTTAAAA CGTAGGGTGGGCATTGCCCATC GGCTCATGGTTTT AGTGGGCATTGCTCACCCTACA GATGTTGATAATTTT TERM 2329 2504469 - 2504452 - T 84 -11.3 -3.62046 | opp_overlap 2504454 TCATTGGGTGAAGAA GACGCGA TTCA TCGCGTC TCTACAAGGGTTCTT Ava_2023 2505060 - 2504524 - | putative thiol-specific antioxidant protein Ava_2024 2505973 - 2505362 - | Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen TERM 2330 2505736 - 2505752 + g 71 -8.7 -3.38162 | opp_overlap 2505734 2505738 CGCTATCAACGGACA CACCGAG AAT TTCGGTG TTAAGTTTCTTGAAT TERM 2331 2507260 - 2507246 - g 72 -6.4 -4.3534 | opp_overlap 2507246 TTTGAATTAGCAAAA GGTCTG TTG CAAACC TTTGGGCGTTATTGC TERM 2332 2508040 - 2508051 + G 73 -5.8 -4.56597 | overlap 2508039 TGGGCCTTTTATCCG CGCT TGGC AGCG TTTTTACCCAGAACA Ava_2025 2506172 - 2508232 + | glycogen debranching protein TERM 2333 2508752 - 2508739 - T 95 -8.1 -4.83759 | AACCAAATCTAAAAA CTGGC GTAG GCCAG GAGTTGAAATAGTGG Ava_2026 2509334 - 2508789 - | hypothetical protein TERM 2334 2510213 - 2510199 - g 75 -8.6 -3.82191 | overlap 2510204 GCAACTCTAGAAGAA CGCAAT CGC ATTGCG CGGGAAATTCACGAC Ava_2027 2509590 - 2510795 + | periplasmic sensor Signal transduction histidine kinase TERM 2335 2511322 - 2511312 - g 75 -5.4 -4.82212 | opp_overlap 2511312 CAAATAACAAAGAAA TTGC CCA GCAA CTCTATATTTCCGAG Ava_2028 2510792 - 2511451 + | two component LuxR family transcriptional regulator Ava_2029 2511893 - 2511468 - | cytidine/deoxycytidylate deaminase, zinc-binding region TERM 2336 2511835 - 2511845 + g 82 -2.4 -5.63103 | ATTACCGCACCGTAT GGCG CAT CTCC TTTTTTTGCTTCGGC Ava_2030 2511959 - 2512750 + | Ion transport protein Ava_2031 2512848 - 2513081 + | hypothetical protein TERM 2337 2513156 - 2513126 - T 76 -6.8 -4.47456 | opp_overlap 2513129, overlap 2513127 2513129 AGATTGAAGAATAAA CCAGCGATCGCCAT TTT ACTGCGATCGCTTA CCTCATCCCCACCAA TERM 2338 2513153 - 2513129 - T 79 -10.7 -3.19055 | opp_overlap 2513129, overlap 2513127 2513126 TTGAAGAATAAACCA GCGATCGCCAT TTT ACTGCGATCGC TTACCTCATCCCCAC TERM 2339 2513129 - 2513153 + T 70 -8.6 -3.09516 | opp_overlap 2513129 2513127 2513126 TTGAAGAATAAACCA GCGATCGC CATTTTACT GCGATCGC TTACCTCATCCCCAC Ava_2032 2514716 - 2513154 - | FAD dependent oxidoreductase TERM 2340 2515195 - 2515219 + H 76 -10.1 -3.02144 | opp_overlap 2515213 TGTAGGGGTGTAGGG GTGTAAGGGTT TTA AACACTTACAC TCTTAGACAAACTGG TERM 2341 2515688 - 2515705 + H 75 -7.1 -4.20696 | opp_overlap 2515688 GAATATGTCTTCAAA CTATATC CAAG GATATAG TTTTCAGCTTACTGA Ava_2033 2515982 - 2516368 + | hypothetical protein TERM 2342 2516434 - 2516403 - T 95 -7.5 -5.28561 | AAGATATAAGAAAAA GGTAATAGATAAT ATAACA ATTACCCATTACC AAATTATCATACCTT Ava_2034 2517420 - 2516473 - | hypothetical protein TERM 2343 2518000 - 2517980 - R 77 -9.7 -3.12319 | overlap 2517979 ACAAAATAATGAAAT TTCCCAGTC AGA GACTGGGAG TGAGGGGACAAATCT ilvH 2518563 - 2518015 - | acetolactate synthase 3 regulatory subunit Ava_2036 2518815 - 2519180 + | hypothetical protein Ava_2037 2520129 - 2519221 - | Alpha/beta hydrolase fold infC 2520574 - 2521107 + | translation initiation factor IF-3 TERM 2344 2521561 - 2521587 + G 71 -2.2 -5.1383 | CTTGGATGTATATTG CCAGTGCGGT TATGGGT ATGGCGCTGG TTTTTGTCTATTCTT Ava_2039 2521347 - 2524355 + | hypothetical protein Ava_2040 2525389 - 2524394 - | hypothetical protein TERM 2345 2526386 - 2526396 + G 93 -4 -5.87996 | TTTAGCCTTTTTTGT CAAT TCG ATTG TTTTTTTATTAATTG Ava_2041 2525520 - 2527082 + | Sodium/hydrogen exchanger Ava_2042 2527931 - 2527131 - | pathogenesis related protein-like TERM 2346 2528538 - 2528525 - g 82 -2.3 -5.67967 | overlap 2528526 AGTACGACAAAAAAA CGGGT TACA ACCCC TACAAAATAACGTCA Ava_2043 2528289 - 2528879 + | Allergen V5/Tpx-1 related Ava_2044 2528942 - 2529418 + | TspO and MBR related proteins Ava_2045 2531465 - 2529582 - | ABC transporter-like TERM 2347 2530406 - 2530435 + g 70 -7.9 -3.73224 | overlap 2530408 GTAATAAAGGTTGCT TTTCCTCCAGATT TTCT AATCTGGCGGATA TTTCCTCAGAGGTAA TERM 2348 2530408 - 2530433 + g 80 -10.5 -3.45027 | overlap 2530406 AATAAAGGTTGCTTT TCCTCCAGATT TTCT AATCTGGCGGA TATTTCCTCAGAGGT Ava_2046 2532222 - 2531680 - | single-strand binding protein TERM 2349 2532423 - 2532410 - H 79 -3.1 -5.45652 | opp_overlap 2532412, overlap 2532412 ATCTCTAATAAAAAA CTCTC TAAT AAGAG TCTGTTTTAGCATAA TERM 2350 2532460 - 2532478 + H 72 -8.2 -3.57144 | opp_overlap 2532441 AGCGACAGTTTTGAA CAGCATTT TTT AGATGCTG TTTGCCACTCCCGCC Ava_2047 2533158 - 2535455 + | retinal pigment epithelial membrane protein TERM 2351 2535538 - 2535498 - T 100 -22.7 -5.36441 | opp_overlap 2535521 CTTCCAGATAAAAAA GGGCATTGCCCACCATATC CGG GTTTTGGTGGGCAATGCCC ACCCTACATATACTT TERM 2352 2535616 - 2535573 - T 91 -9.8 -4.36914 | gap 1, overlap 2535574 2535576 TTGTTCTCTATAAAA CCATCTATATCCCCGACTTTT GCA AAAAGTCGGGGATAT-GAAAC TCTAGATATTCATAA TERM 2353 2535615 - 2535574 - T 95 -13.3 -3.21934 | gap 1, overlap 2535573 2535576 TGTTCTCTATAAAAC CATCTATATCCCCGACTTTT GCA AAAAGTCGGGGATAT-GAAA CTCTAGATATTCATA TERM 2354 2535613 - 2535576 - T 100 -18.1 -3.1733 | gap 1, overlap 2535574 2535573 TTCTCTATAAAACCA TCTATATCCCCGACTTTT GCA AAAAGTCGGGGATAT-GA AACTCTAGATATTCA Ava_2048 2536410 - 2535646 - | Fatty acid desaturase TERM 2355 2536977 - 2536967 - R 71 -4.6 -4.89233 | opp_overlap 2536967 CATGAACAGGAAAAA CGCC CAA GGCA ATTAATCTGGCTGGT Ava_2049 2538173 - 2536944 - | hypothetical protein TERM 2356 2539265 - 2539287 + G 71 -4.9 -4.65916 | CGCTTTGTAGCTGAA TTCATTGGT ACACC ACCCATGAA TTTTATTCCCGTAGA Ava_2050 2538362 - 2539681 + | ABC transporter-like Ava_2051 2540206 - 2539832 - | hypothetical protein TERM 2357 2540094 - 2540116 + g 70 -2.7 -5.06816 | opp_overlap 2540094 GCAGCTGCATAATCA GCATCAAAA TCAAC TTTCGGTGC TTTTTCTTCACCACT Ava_2052 2540426 - 2540956 + | hypothetical protein TERM 2358 2541302 - 2541329 + F 100 -17.2 -3.90922 | opp_overlap 2541309 ACTTTATTCTTTACT GTAGAGACGTTG CGTG CAACGTCTCTAC TTATTTGGCGCAACT Ava_2053 2541482 - 2542825 + | adenylosuccinate synthetase TERM 2359 2542914 - 2542884 - f 78 -7.7 -4.24786 | gap 1, opp_overlap 2542892, overlap 2542888 2542892 GTGACAACAGACAAA TGT-ACAGACGCGA TTAA TCGCGTCTCTAACA ACTAACAACCGACAA TERM 2360 2542979 - 2542967 - g 79 -3.3 -5.37593 | opp_overlap 2542970, overlap 2542968 2542969 GTCGAAACTAAAAAA CGCCC AGA AGGCA GCAAGCCTAAAGCTT Ava_2054 2542940 - 2543239 + | 50S ribosomal protein L25 TERM 2361 2543314 - 2543297 - f 78 -11.3 -2.58758 | opp_overlap 2543297, overlap 2543296 ATAATTGCTGATAAG CCAGGGT TAAA ACCCTGG TTTTTTGTTGTTTGC TERM 2362 2543297 - 2543314 + F 100 -11.3 -5.72254 | opp_overlap 2543297 2543296 ATAATTGCTGATAAG CCAGGGT TAAA ACCCTGG TTTTTTGTTGTTTGC Ava_2055 2543433 - 2544188 + | dienelactone hydrolase Ava_2056 2544346 - 2545878 + | hypothetical protein TERM 2363 2546369 - 2546335 - g 71 -5 -4.71708 | opp_overlap 2546341 2546353, overlap 2546343 AAGAAGAAACGAAAA CTCAATTACCTGTGAA TGC TTCACAAGAAGTTGTG AGTGAAGAGTCGAGC Ava_2057 2545974 - 2546495 + | hypothetical protein Ava_2058 2549039 - 2546571 - | ATP-dependent DNA helicase RecG TERM 2364 2548628 - 2548600 - G 89 -10.3 -4.05033 | opp_overlap 2548595 CGCACTGTATACAAA CGCAAAGCCGCTA ATT TATCTGCTTTGCG AATGCCTATTTCTGG Ava_2059 2549977 - 2549135 - | hypothetical protein TERM 2365 2549502 - 2549515 + g 70 -5.3 -4.45083 | opp_overlap 2549502, overlap 2549506 TGCAGCAAAACATTA GTTTC ATGA GAAAC TTTTCTCAGTGTCCG TERM 2366 2550104 - 2550076 - R 80 -6.6 -4.78572 | overlap 2550077 TCTGAATTAATAAAA TGCAGGCCAGGC TATTT GCTTGACCTGCT GCATAAAAGTCAAAA TERM 2367 2550103 - 2550077 - R 78 -10.1 -3.4642 | overlap 2550076 CTGAATTAATAAAAT GCAGGCCAGGC TATTT GCTTGACCTGC TGCATAAAAGTCAAA tsf 2551134 - 2550193 - | elongation factor Ts rpsB 2552251 - 2551454 - | 30S ribosomal protein S2 TERM 2368 2551840 - 2551855 + g 71 -3.2 -5.02074 | overlap 2551838 TCGCCAGTTCCCGCC GTAGCA TGGA TGCTTC TTTTTTCGGCAGTAA Ava_2062 2552944 - 2552381 - | hypothetical protein TERM 2369 2552796 - 2552820 + g 78 -10.2 -3.34715 | opp_overlap 2552810, overlap 2552794 TCATTTTTTATATCG TCTGTCATAA CAATT TTATGACAGA TATTTAAAACAGCTA Ava_2063 2554313 - 2552934 - | hypothetical protein Ava_2064 2555527 - 2554559 - | glycosyl transferase family protein Ava_2065 2555976 - 2558156 + | twin-arginine translocation pathway signal TERM 2370 2558152 - 2558162 + T 85 -4 -5.66868 | GCGTGATTGGCGGTC TGTA ATT TACA TTTTTTTGATTAATT TERM 2371 2558213 - 2558183 - T 90 -13.4 -2.85896 | opp_overlap 2558183, overlap 2558180 TTGATTAATTAACTA TGTAGAGACGTTGT ATT ACAGCGCCTCTACA TTTTTATATTTTGAT TERM 2372 2558183 - 2558213 + T 100 -13.4 -5.30339 | opp_overlap 2558183 2558180 TTGATTAATTAACTA TGTAGAGACGTTGT ATT ACAGCGCCTCTACA TTTTTATATTTTGAT TERM 2373 2558252 - 2558235 - T 95 -7.7 -5.252 | TATTTTGATAAAAAA GACAGGT ACAC ACCTGCC CGGCTAGCAATATTC TERM 2374 2558288 - 2558298 + T 79 -3.2 -5.4756 | AATGGTTTCTAGCTT GCTA CTG TGGC TTTTTTCTTACGCTT Ava_2066 2558820 - 2558281 - | hypothetical protein TERM 2375 2559060 - 2559042 - R 100 -10.3 -5.48213 | opp_overlap 2559040 CACTCAAAATAAAAA CCCCACT GTTGA AGTGGGG AGTGATTCAATCAGG Ava_2067 2559705 - 2559148 - | hypothetical protein TERM 2376 2559946 - 2559958 + H 74 -4.9 -4.7261 | opp_overlap 2559946 TGTAGTTAGATATAA TAATG ACT CATTA TTTGTTTTCCTAACT Ava_2068 2559984 - 2561186 + | argininosuccinate synthase Ava_2069 2561896 - 2561267 - | hypothetical protein TERM 2377 2561433 - 2561414 - G 70 -2.8 -5.03314 | overlap 2561416 CTTACCTGCAAAAAA GGCTAATG TCAC CATCAGGC TAGCCCAAGCAGTTG TERM 2378 2562551 - 2562569 + G 71 -8.8 -3.24747 | AGGACTTACTTCAGC GCGCCAAC TTG GTTGTCGC TTGATACTATGCAAC Ava_2070 2562306 - 2562707 + | anti-sigma-factor antagonist domain-containing protein Ava_2071 2563865 - 2563305 - | hypothetical protein rpsF 2564458 - 2564132 - | 30S ribosomal protein S6 Ava_2073 2564633 - 2565406 + | fumarylacetoacetate (FAA) hydrolase Ava_2074 2565885 - 2565409 - | hypothetical protein Ava_2075 2566164 - 2565967 - | hypothetical protein glyA 2566699 - 2567982 + | serine hydroxymethyltransferase TERM 2379 2568024 - 2567991 - f 70 -8.9 -3.07935 | opp_overlap 2567997, overlap 2567993 AGCTTAGGGATTGAA GAGGGATGAGGGAAA AATT CTTCTCTCATTCCTC ACCCCTCAAGAGTTT Ava_2077 2568276 - 2569322 + | glycosyl transferase family protein Ava_2078 2569378 - 2570628 + | competence damage-inducible protein A TERM 2380 2570675 - 2570624 - f 100 -20.6 -3.28712 | opp_overlap 2570633 GGCGCTTGTTGACAA GGTGATATACTCCCACACTT GGTGCAAACTGT AAGTGTGGGAGTATATCACC GAATCCGGGTATCTC TERM 2381 2570633 - 2570666 + F 77 -10.3 -2.87564 | opp_overlap 2570624 TGACAAGGTGATATA CTCCCACACTTGGTG CAAA CTGTAAGTGTGGGAG TATATCACCGAATCC TERM 2382 2571116 - 2571092 - g 71 -9.3 -2.95223 | overlap 2571080 GAAGCCTACGACAGA GGCGGCAAATT CCG AATGTACCGCC AAAACCCAGCTTTGA Ava_2079 2570660 - 2571316 + | hypothetical protein TERM 2383 2571432 - 2571400 - f 76 -7.7 -4.14615 | opp_overlap 2571408 AAAAAGCTTTCAAAA CCCATAAGATTGCCG TAG CGGTAAAGTTATGGG TAAAGTCATAGTAAC Ava_2080 2572170 - 2572382 + | inorganic carbon transport Ava_2081 2572408 - 2572725 + | hypothetical protein trpA 2572862 - 2573662 + | tryptophan synthase subunit alpha Ava_2083 2573906 - 2574553 + | heterocyst differentiation related protein Ava_2084 2576557 - 2574626 - | Serine/threonine protein kinase TERM 2384 2575523 - 2575511 - G 72 -6.3 -4.39426 | overlap 2575477 2575515 CACATTGGGATAAAA GTTAG CTA CTAAC GCAGCCGCGCCACCC TERM 2385 2576754 - 2576742 - g 70 -5.5 -4.52415 | overlap 2576750 ACCCAGAATAACAAA CCAAG ATA CCTGG CACCAGGCCGAACTC Ava_2085 2576722 - 2577210 + | hypothetical protein TERM 2386 2577236 - 2577259 + T 80 -6.1 -4.89519 | ATCGCCTAGCGTAGC CCAATAAGT CATAGA ACTTGTTGG TTTATTTTCTCTTGT Ava_2086 2577778 - 2577482 - | hypothetical protein TERM 2387 2577817 - 2577828 + H 81 -3 -5.75822 | AAGTAACTTTTACTA CTTT TTCA AAAG TTTTTTTACTTTATC TERM 2388 2577996 - 2577938 - H 100 -19.1 -3.35597 | gap 2, opp_overlap 2577940 2577945, overlap 2577940 2577941 TTGATTTCTGAAATA TACGTAGGGTGGGCATTGCCCACCTTATC ATG GTTGTGGTGGGCAATGCCCACCCTAC--A GATACTTAGATATTT TERM 2389 2577940 - 2577998 + H 100 -22.7 -2.81509 | gap 2, opp_overlap 2577938 2577940 2577941, overlap 2577945 GATTTCTGAAATATA -C-GTAGGGTGGGCATTGCCCACCTTATC ATG GTTGTGGTGGGCAATGCCCACCCTACAGA TACTTAGATATTTTC TERM 2390 2577996 - 2577940 - H 100 -28.9 -3.24708 | opp_overlap 2577940 2577945, overlap 2577938 2577941 GATTTCTGAAATATA CGTAGGGTGGGCATTGCCCACCTTATC ATG GTTGTGGTGGGCAATGCCCACCCTACA GATACTTAGATATTT TERM 2391 2577995 - 2577941 - H 100 -30.2 -2.54504 | opp_overlap 2577940 2577945, overlap 2577938 2577940 ATTTCTGAAATATAC GTAGGGTGGGCATTGCCCACCTTATC ATG GTTGTGGTGGGCAATGCCCACCCTAC AGATACTTAGATATT TERM 2392 2577945 - 2577961 + H 100 -13.7 -3.48684 | opp_overlap 2577941 2577938 2577940, overlap 2577940 CTGAAATATACGTAG GGTGGGC ATT GCCCACC TTATCATGGTTGTGG Ava_2087 2578320 - 2578607 + | prevent-host-death protein Ava_2088 2578617 - 2578949 + | addiction module toxin, Txe/YoeB Ava_2089 2580866 - 2578953 - | small GTP-binding protein domain-containing protein TERM 2393 2581696 - 2581715 + G 72 -10 -2.88434 | overlap 2581695 ATGAGATCCATGAGT CTAGCAGC AATG GCTGCTGG CTTTACTGCCTTGTT Ava_2090 2581207 - 2582511 + | Cl- channel, voltage gated TERM 2394 2583023 - 2582965 - f 73 -8.9 -3.35597 | gap 2, opp_overlap 2582965 2582967 2582967 2582971 2582987 2582989, overlap 2582967 2582968 TTGATTTCTGAAATA TACGTAGGGTGGGCATTGCCCACCGTATC ATG GTTTTGGTGGGCATTGCCCACCGTAC--A GATACTTAGATATTT TERM 2395 2583023 - 2582967 - f 100 -18.7 -3.24708 | opp_overlap 2582965 2582967 2582967 2582971 2582987 2582989, overlap 2582965 2582968 GATTTCTGAAATATA CGTAGGGTGGGCATTGCCCACCGTATC ATG GTTTTGGTGGGCATTGCCCACCGTACA GATACTTAGATATTT TERM 2396 2582967 - 2583025 + F 86 -12.5 -2.81509 | gap 2, opp_overlap 2582965 2582967 2582968, overlap 2582965 2582967 2582971 2582987 2582989 GATTTCTGAAATATA -C-GTAGGGTGGGCATTGCCCACCGTATC ATG GTTTTGGTGGGCATTGCCCACCGTACAGA TACTTAGATATTTTC TERM 2397 2583022 - 2582968 - f 100 -20 -2.54504 | opp_overlap 2582967 2582965 2582967 2582971 2582987 2582989, overlap 2582965 2582967 ATTTCTGAAATATAC GTAGGGTGGGCATTGCCCACCGTATC ATG GTTTTGGTGGGCATTGCCCACCGTAC AGATACTTAGATATT TERM 2398 2582971 - 2582989 + F 75 -10.2 -2.9244 | opp_overlap 2582968 2582965 2582967, overlap 2582967 2582965 2582967 2582987 TCTGAAATATACGTA GGGTGGGC ATT GCCCACCG TATCATGGTTTTGGT TERM 2399 2584045 - 2584024 - g 73 -10.1 -3.03012 | overlap 2584021 ATTATTGATAAATTA GGCTGGGGT GTTA AACCCAGCC CTCAAGAAACTTATG TERM 2400 2584319 - 2584331 + G 73 -9.1 -3.53012 | opp_overlap 2584319 AAATATATGTAGATA GCCTG CTT CAGGC TTTAGAAAAAGAACG Ava_2091 2583298 - 2584356 + | hypothetical protein TERM 2401 2584548 - 2584519 - T 78 -8.6 -3.76232 | overlap 2584521 TCCTGAAAGAGATAA CAGTAGGGGCGC ACAGCA ACACCCCTACTA GCTCGTATCCTATGA TERM 2402 2584546 - 2584521 - T 73 -9 -3.46008 | overlap 2584519 CTGAAAGAGATAACA GTAGGGGCGC ACAGCA ACACCCCTAC TAGCTCGTATCCTAT Ava_2092 2585846 - 2584572 - | penicillin-binding protein, transpeptidase Ava_2093 2586572 - 2587279 + | sugar transferase Ava_2094 2588119 - 2587280 - | binding-protein dependent transport system inner membrane protein TERM 2403 2588127 - 2588153 + r 70 -8.8 -3.05844 | overlap 2588132 CAATTCATTCTGTTC GTTGACGGTTGA CAG TTAGCCGTTAAC TATTAACATGAAAAG Ava_2095 2588805 - 2588149 - | 5-formyltetrahydrofolate cyclo-ligase TERM 2404 2588251 - 2588263 + g 71 -3.3 -5.06103 | opp_overlap 2588251, overlap 2588252 AAAATCAAAGACAAT TCCGA TAG TCGGC TTTTTTGACCATTCT Ava_2096 2589767 - 2588823 - | 3-beta hydroxysteroid dehydrogenase/isomerase Ava_2097 2590826 - 2589792 - | GDP-mannose 4,6-dehydratase TERM 2405 2590008 - 2589988 - G 72 -6.1 -4.34737 | TCACCAATTAATAAA TCTACTTCC GCC GGACGCAGA TAACGCTCATCAAAC TERM 2406 2590878 - 2590868 - g 70 -5.4 -4.50241 | opp_overlap 2590868, overlap 2590858 2590862 AAATATGAACCAAAA CTTG CCT CAAG ATTTAGACAGAGAAA TERM 2407 2591143 - 2591127 - g 70 -3.6 -4.89063 | CCACCGAAAAAGAAA CCAGGT GGGCA ACCAGG ACATCAAGGTAAAAC TERM 2408 2591278 - 2591265 - g 71 -2.3 -5.09245 | overlap 2591267 GTAAAAGTAGAAAAA CACGC GGTA GCGCA ACTAGTAGAATGTCC Ava_2098 2590857 - 2592329 + | transposase IS66 TERM 2409 2592642 - 2592661 + T 74 -4.4 -5.06414 | gap 1, opp_overlap 2592656 GCACTTTACCCTTTT TCTTAGGTA TAT TACC-AAGA TTTTTCTTGGCCAAA Ava_2099 2593721 - 2592963 - | sugar transferase Ava_2100 2594977 - 2593832 - | glycosyl transferase, group 1 TERM 2410 2595114 - 2595098 - H 78 -9.5 -3.60627 | opp_overlap 2595097 2595096 2595098 TTACTCTATGGGAAA CTGACTT TTA AAGTCAG GATTTTTTCAGGTCA TERM 2411 2595098 - 2595114 + H 73 -9.5 -2.77166 | opp_overlap 2595098, overlap 2595097 2595096 TTACTCTATGGGAAA CTGACTT TTA AAGTCAG GATTTTTTCAGGTCA Ava_2101 2595421 - 2596362 + | 3-beta hydroxysteroid dehydrogenase/isomerase Ava_2102 2597809 - 2596511 - | Sodium/hydrogen exchanger TERM 2412 2597290 - 2597278 - G 71 -4.1 -4.87626 | CTTTAATAGCAAAAA GTCCA AAA TAGAC AAAAGGAAACGCTAA Ava_2103 2597964 - 2599331 + | cytochrome P450 Ava_2104 2604045 - 2599387 - | WD-40 repeat-containing protein TERM 2413 2602275 - 2602263 - G 71 -4.9 -4.60924 | CAAATTGGTCAAAAA TTAAC ACT GTTAA CAGATGGCGCTCAGA TERM 2414 2603779 - 2603751 - G 76 -9.7 -3.25719 | TCAGCACAGTATCAA TGTCTTTAGCTGA CTC TAAGCCAAAGACA ATCAATGCGGGTGGT TERM 2415 2603967 - 2603953 - G 77 -5 -4.99568 | TAATATTAAAGAAAA TTCTCC CTG GGAAAA AGTAATTGCCCTGAC Ava_2105 2605370 - 2604066 - | hypothetical protein Ava_2106 2606130 - 2605510 - | hypothetical protein Ava_2107 2606316 - 2606792 + | hypothetical protein TERM 2416 2606852 - 2606835 - f 88 -11.3 -3.73872 | opp_overlap 2606826 2606837 2606849 ACCAACAGTGAAGAA GACGCGA TGAA TCGCGTC TCTACAGATGGTTTA Ava_2108 2607018 - 2607737 + | rhomboid-like protein Ava_2109 2610091 - 2607758 - | Serine/threonine protein kinase with Chase2 sensor TERM 2417 2607785 - 2607824 + g 100 -10.2 -4.34402 | overlap 2607774 2607770 TGCGGTCGGAAAATC TGACTCATCTATGGATAT GATT GTGTTCATTGATGAGTCA TTTTGCTGTCCGAAG Ava_2110 2610897 - 2611418 + | hypothetical protein TERM 2418 2611515 - 2611501 - f 71 -5 -4.59982 | GTACAACTAAACAAA TAGCCA AAA TGACTA CTAAACCAGAGAGAA Ava_2111 2611509 - 2613104 + | 2-isopropylmalate synthase TERM 2419 2613142 - 2613114 - f 100 -11.9 -4.4595 | opp_overlap 2613114 2613118, overlap 2613118 GCATAAAACTTAAAA TAAACCCAACTCA CTA CAAGTTGGGTTTA TTTATTTCTCCTAAT TERM 2420 2613114 - 2613142 + F 95 -10.5 -4.59944 | opp_overlap 2613114 2613118, overlap 2613118 GCATAAAACTTAAAA TAAACCCAACT CACTACA AGTTGGGTTTA TTTATTTCTCCTAAT TERM 2421 2613138 - 2613118 - f 95 -8.3 -4.75954 | opp_overlap 2613114 2613118, overlap 2613114 AAAACTTAAAATAAA CCCAACTCA CTA CAAGTTGGG TTTATTTATTTCTCC TERM 2422 2613118 - 2613138 + F 83 -6.9 -4.83246 | opp_overlap 2613118 2613114, overlap 2613114 AAAACTTAAAATAAA CCCAACT CACTACA AGTTGGG TTTATTTATTTCTCC dapF 2613173 - 2614030 + | diaminopimelate epimerase TERM 2423 2614981 - 2614993 + G 74 -7.7 -4.04318 | AGCCAAGTGGTTAGG GGGAA AAA TTCCC TTTGTGGTCTGTACC Ava_2113 2614097 - 2615542 + | ATP-dependent DNA helicase RecQ Ava_2114 2616017 - 2615544 - | hypothetical protein TERM 2424 2616128 - 2616170 + r 75 -8.8 -3.54717 | gap 1, opp_overlap 2616130 2616137 ATTATATTTTTAGAG GAGTTAAAAGTT-GGAATT TAGATT AATTCCTAACTCTTAACTC TTGATTATGATTTTT pheS 2617177 - 2616185 - | phenylalanyl-tRNA synthetase subunit alpha TERM 2425 2616239 - 2616225 - G 73 -7.1 -4.10164 | opp_overlap 2616224 2616225 TCACTAGCATATAAA CGACG GATAT CGTCG ATTTGGTGTAACACC TERM 2426 2617748 - 2617785 + G 79 -8.5 -4.14739 | gap 1 GGTACGGTTTCTGCG GCGATGGAGGGAATGATC GAA GGT-ATTCCCAGCATCGC TTTTAGCCTAACTAG surE 2617403 - 2618200 + | stationary phase survival protein SurE Ava_2117 2618603 - 2619499 + | Beta-lactamase-like Ava_2118 2619659 - 2620717 + | bifunctional riboflavin kinase/FMN adenylyltransferase TERM 2427 2620772 - 2620782 + F 74 -2.6 -5.36441 | ACATCTACGCCCTAG TATT CTG AATA TTTTTTATCTGGAAG TERM 2428 2620895 - 2620934 + F 82 -8 -4.38927 | opp_overlap 2620886 2620895 2620897, overlap 2620897 GGAACACTGTAAATA CAGGAGTGGGGAATAA GGCATAGG TTATTCTCCATTCCAG TTTCTTATATGAGGA TERM 2429 2620897 - 2620932 + F 71 -9.2 -2.53243 | opp_overlap 2620895 2620897, overlap 2620895 AACACTGTAAATACA GGAGTGGGGAATAA GGCATAGG TTATTCTCCATTCC AGTTTCTTATATGAG Ava_2119 2621072 - 2621980 + | magnesium chelatase, ChlI subunit Ava_2120 2622035 - 2622292 + | hypothetical protein Ava_2123 2622747 - 2623289 + | hypothetical protein secA 2623599 - 2626391 + | preprotein translocase subunit SecA TERM 2430 2626420 - 2626461 + F 100 -16.8 -4.58283 | opp_overlap 2626426 AGATAAAATGTTTCA CGCAAAGGCGCTAAGACG CAAAGT TGTCTTAGTGCCTTTGTG TTTTTGAACGCATTC TERM 2431 2626455 - 2626426 - f 72 -7.9 -3.65199 | opp_overlap 2626420 AATGTTTCACGCAAA GGCGCTAAGAC GCAAAGTT GTCTTAGTGCC TTTGTGTTTTTGAAC TERM 2432 2629134 - 2629110 - g 74 -10.1 -3.14468 | opp_overlap 2629112 2629115, overlap 2629112 2629115 CTGGAGTATATTCAA GATAAGCTTGG TCG CCAAGCTTATA ATATTGTGGTCACTA TERM 2433 2629132 - 2629112 - g 93 -12.7 -3.13299 | opp_overlap 2629112 2629115, overlap 2629110 2629115 GGAGTATATTCAAGA TAAGCTTGG TCG CCAAGCTTA TAATATTGTGGTCAC TERM 2434 2629112 - 2629132 + G 89 -12.7 -2.81872 | opp_overlap 2629110 2629112 2629115, overlap 2629115 GGAGTATATTCAAGA TAAGCTTGG TCG CCAAGCTTA TAATATTGTGGTCAC TERM 2435 2629115 - 2629129 + G 78 -10 -3.55173 | opp_overlap 2629115 2629112 2629110, overlap 2629112 GTATATTCAAGATAA GCTTGG TCG CCAAGC TTATAATATTGTGGT TERM 2436 2629129 - 2629115 - g 80 -10 -3.70446 | opp_overlap 2629112 2629115, overlap 2629112 2629110 GTATATTCAAGATAA GCTTGG TCG CCAAGC TTATAATATTGTGGT Ava_2125 2626632 - 2629160 + | Type III restriction enzyme, res subunit TERM 2437 2629180 - 2629170 - f 73 -5.4 -4.67256 | opp_overlap 2629170 GAATAAATCATAAAA TCTG AAA CAGA ATGTATTTGGCACAA Ava_2126 2629259 - 2629942 + | hypothetical protein TERM 2438 2630116 - 2630071 - g 84 -11.3 -3.1085 | gap 1, overlap 2630081 GTAAGTCAGGTAACA CCTTCGATAACCTTAGCGATCG CAG CGAAAGCTAAGGCCAT-GAAGG CAGAGGGTATAGACG TERM 2439 2630107 - 2630081 - g 74 -9.4 -3.31248 | overlap 2630071 TAACACCTTCGATAA CCTTAGCGATCG CAG CGAAAGCTAAGG CCATGAAGGCAGAGG Ava_2127 2630038 - 2631204 + | aspartate aminotransferase TERM 2440 2631253 - 2631286 + F 74 -8.3 -3.6834 | gap 1, overlap 2631256 2631278 AAATATCATACATCT TCTTATAGGGTGGGCA TCT TGCCTACCCTA-AATA TTTGGGAGTTTTATT TERM 2441 2631256 - 2631284 + F 93 -12.5 -3.40843 | overlap 2631253 2631278 TATCATACATCTTCT TATAGGGTGGGCA TCT TGCCTACCCTAAA TATTTGGGAGTTTTA Ava_2128 2631368 - 2631946 + | hypothetical protein Ava_2129 2632362 - 2631982 - | transcription regulator containing HTH Ava_2130 2632668 - 2632375 - | hypothetical protein Ava_2131 2633870 - 2632683 - | glycosyl transferase family protein TERM 2442 2633334 - 2633347 + g 71 -2.3 -5.15634 | overlap 2633335 GGCATATTTGTTATT TTGCG CGAT CGCAC TTTTTTGATAACCTG Ava_2132 2635436 - 2634426 - | hypothetical protein Ava_2133 2635941 - 2635687 - | hypothetical protein Ava_2134 2639081 - 2636010 - | phosphoenolpyruvate carboxylase TERM 2443 2638254 - 2638244 - G 78 -5.4 -4.93877 | TCCCATCAAATAAAA CTTC TTG GAAG TAGTGCAAAGCATAA Ava_2135 2639420 - 2639187 - | hypothetical protein TERM 2444 2639907 - 2639893 - g 89 -7 -5.41143 | overlap 2639894 TACGGGCGAAAAAAA GGGGAG TAC CGCCCC CAATGGTGCCACAAA TERM 2445 2639963 - 2639924 - g 73 -10 -2.91772 | overlap 2639923 2639934 AATGGTGCCACAAAG TCCACTTAAACCAGTTGG AACG CCATCTGGAACAAGTGGA ACAAGCCCTACTAGA TERM 2446 2639953 - 2639934 - g 70 -7.8 -3.67588 | overlap 2639924 2639923 CAAAGTCCACTTAAA CCAGTTGG AACG CCATCTGG AACAAGTGGAACAAG TERM 2447 2640005 - 2639992 - g 78 -9.5 -3.68506 | opp_overlap 2639990 GAAGACGCAGCTAAA GCCCC TGGT GGGGC AATGATTCTCTCTAA Ava_2136 2639638 - 2642634 + | hypothetical protein Ava_2137 2642756 - 2644255 + | membrane bound O-acyl transferase, MBOAT TERM 2448 2644404 - 2644368 - f 73 -6 -4.49556 | gap 1, overlap 2644369 2644371 GTTGCACCAAATAAA TGA-TGTAGAGACTTTG TATG CAACGTCTCTACAGTCC AGAATAAAGCACATC TERM 2449 2644403 - 2644369 - f 76 -9.5 -3.29252 | gap 1, overlap 2644368 2644371 TTGCACCAAATAAAT GA-TGTAGAGACTTTG TATG CAACGTCTCTACAGTC CAGAATAAAGCACAT TERM 2450 2644400 - 2644371 - f 87 -12.3 -3.20639 | overlap 2644369 2644368 GCACCAAATAAATGA TGTAGAGACTTTG TATG CAACGTCTCTACA GTCCAGAATAAAGCA Ava_2138 2644730 - 2645812 + | photosystem II reaction centre protein PsbA/D1 TERM 2451 2645838 - 2645866 + T 100 -12.5 -5.1675 | opp_overlap 2645838 CAGTTAATTAAAAAA GCGCTCTTCCA TGCAAAT TGGAAGGGCGC TTTTTTGGTGGCTAA TERM 2452 2645866 - 2645838 - T 100 -10.3 -5.28481 | opp_overlap 2645838 CAGTTAATTAAAAAA GCGCTCTTCCA TGCAAAT TGGAAGGGCGC TTTTTTGGTGGCTAA TERM 2453 2645974 - 2645943 - T 80 -10.2 -3.53811 | opp_overlap 2645945, overlap 2645944 TCCATTCCCCTGAAA CTGTAGAGACGTTG CATG CAACGTCTCTACTT TGAATCTTGCTCCCC TERM 2454 2645973 - 2645944 - T 93 -13.7 -2.72144 | opp_overlap 2645945, overlap 2645943 CCATTCCCCTGAAAC TGTAGAGACGTTG CATG CAACGTCTCTACT TTGAATCTTGCTCCC TERM 2455 2645945 - 2645972 + T 100 -17.2 -3.77831 | opp_overlap 2645944 2645943 CATTCCCCTGAAACT GTAGAGACGTTG CATG CAACGTCTCTAC TTTGAATCTTGCTCC Ava_2139 2646860 - 2646282 - | hypothetical protein Ava_2140 2647036 - 2649147 + | peptidase S8 and S53, subtilisin, kexin, sedolisin Ava_2141 2650077 - 2649148 - | phospholipid/glycerol acyltransferase Ava_2142 2650634 - 2650191 - | tRNA-adenosine deaminase Ava_2143 2651035 - 2650724 - | glutaredoxin GrxC TERM 2456 2651185 - 2651225 + r 93 -14.3 -2.53382 | opp_overlap 2651197, overlap 2651197 TCTTTCTGGATTTTG TAATCGGGAATAGGTAATA AAT TATTACCTATTCCCCATCA TCCATTACCAATCCT Ava_2144 2651941 - 2651264 - | NAD-dependent epimerase/dehydratase Ava_2145 2652953 - 2651967 - | hypothetical protein TERM 2457 2653571 - 2653559 - g 70 -2.7 -5.04597 | ATTTACACACAAAAA TCCAA CGT TTAGA TGCTGATAATCCTTC Ava_2146 2653333 - 2653629 + | hypothetical protein TERM 2458 2655171 - 2655157 - g 70 -7.2 -3.87373 | opp_overlap 2655148 GATATTCTGCACAAA CACAAT GGG ATTGTG AGGTGTGCGGCTTTT Ava_2147 2654014 - 2655783 + | WD-40 repeat-containing protein TERM 2459 2655881 - 2655859 - f 74 -9.2 -3.07994 | opp_overlap 2655859, overlap 2655861 TCTAACCCCACTCAA CAGCGCTAAT CAA ATTAGCGTTG TTTTTTGGCATATCT TERM 2460 2655859 - 2655881 + F 100 -11.4 -5.08169 | opp_overlap 2655859 2655861 TCTAACCCCACTCAA CAGCGCTAAT CAA ATTAGCGTTG TTTTTTGGCATATCT TERM 2461 2657830 - 2657814 - g 71 -2.3 -5.16572 | overlap 2657815 ATTGAAGCTAAAAAA CTAGAAT TAT ATCCTAA AGAATTTGATTTAAG Ava_2148 2656206 - 2659019 + | Cache sensor hybrid histidine kinase TERM 2462 2659976 - 2659993 + G 72 -7.1 -3.94002 | opp_overlap 2659976 TATTCATATTATCAA GGAATAT GGTG ATATTCC TTTGGTTGAGTGCTA Ava_2149 2659158 - 2660381 + | response regulator receiver Signal transduction histidine kinase Ava_2150 2660863 - 2662194 + | response regulator receiver Signal transduction histidine kinase TERM 2463 2663115 - 2663093 - g 71 -3.4 -5.06585 | overlap 2663085 2663096 CAAAGTAGATAAAAA TATCGTCTAT GAG ATTGACGGTA AACCAGCTTTAGAAT TERM 2464 2663383 - 2663393 + G 75 -3.2 -5.1764 | CAGGAACGGAACCAG CAGG TGT TCTG TTTTTCTCTTGTGTA TERM 2465 2663475 - 2663465 - g 70 -2.6 -4.93696 | TCTAAATACTAAAAA TATT TCT AATA AATATTTACCATCTT TERM 2466 2663484 - 2663494 + G 75 -3.2 -5.22006 | TCTAATAAATATTTA CCAT CTT GTGG TTTTTATTGTAATGG Ava_2151 2662440 - 2663591 + | hypothetical protein TERM 2467 2663638 - 2663626 - g 82 -7.7 -4.45068 | ATTGTGAACAAGAAA TCCAG AGG CTGGA AAAAGCTAATAGAAT Ava_2152 2663607 - 2664635 + | histidine kinase TERM 2468 2664677 - 2664647 - T 100 -16.4 -5.82316 | opp_overlap 2664645 ATGATTTAAAAAAAA TATCCCCGACTTTT GGG AAAAATCGGGGATA AATGGATTGAGATAG Ava_2153 2666258 - 2664696 - | NAD(P)H-quinone oxidoreductase subunit 2 TERM 2469 2665631 - 2665610 - G 70 -3.7 -4.91109 | gap 1, overlap 2665613 CCGCGATGACAAAAA CCAGG-GCAA TAA CTGCACCTAG TGATTGACCAACGTT TERM 2470 2666187 - 2666177 - G 71 -4.6 -4.58644 | overlap 2666178 AATCAACAATCAAAA CCCC CAT GAGG GTGACAATTACAATT TERM 2471 2666538 - 2666548 + r 73 -3.2 -5.1848 | AAGAGAAATACTAAT GGTT AAT GACC TTTTTTGAATTGATT Ava_2154 2668095 - 2666563 - | hypothetical protein TERM 2472 2666744 - 2666771 + g 75 -10.6 -2.76162 | gap 1, opp_overlap 2666745, overlap 2666743 TGTAAGTAACGATAA ACGCGATCGC-CA TAT TGAGCGATCGCGG ATTTAAGATCAGATG TERM 2473 2666770 - 2666745 - G 100 -14.1 -4.10331 | gap 1, opp_overlap 2666744 2666743 GTAAGTAACGATAAA CGCGATCGC-CA TAT TGAGCGATCGCG GATTTAAGATCAGAT TERM 2474 2667197 - 2667207 + g 81 -5.4 -5.10461 | GGGAAATTGTATTTA TCCT CCA AGGA TTTTTCTTGGATGAC Ava_2155 2669179 - 2668304 - | hypothetical protein TERM 2475 2669001 - 2669015 + g 79 -7.8 -4.386 | CGGGAACGGGGTATA GGTGCA GCT TGCGCC TTTTGTGCCACATTA Ava_2156 2669730 - 2669272 - | hypothetical protein TERM 2476 2669322 - 2669307 - G 75 -9 -3.65693 | AGTATATAGGGGAAA TCTGGC GCAG GCCAGA GATCAGGCTTAACCC TERM 2477 2669763 - 2669805 + r 85 -12.2 -3.02461 | opp_overlap 2669767, overlap 2669767 AGCAATAGATTCCAA TGAACTACCCTTGGCTAA CTTCGTT TGAGCTAGGGGTAGTTCA TCTTACAGAAAATTA Ava_2157 2671369 - 2669903 - | arginine decarboxylase TERM 2478 2671700 - 2671747 + G 100 -32.2 -3.18264 | opp_overlap 2671686 AGCCCTGCCCTTCTA GGGCGCTTGACCGGGGCGGAGT ACAA GCTCCGTCTCGGTCAAGCGCCC TTGCTCCCTGCCCCC Ava_2158 2671499 - 2671783 + | hypothetical protein Ava_2159 2671846 - 2672706 + | hypothetical protein Ava_2160 2672972 - 2673157 + | hypothetical protein Ava_2161 2673212 - 2674282 + | peptidase U62, modulator of DNA gyrase TERM 2479 2676240 - 2676229 - g 78 -5.8 -4.74801 | CAACTCTATTAAAAA TGGC AGCT GCCA TTGCCCGCGATCGCC TERM 2480 2676939 - 2676958 + G 76 -10 -3.25341 | overlap 2676937 ATTCAAGGTAATATT CCAGAGGC GATC GCTTCTGG TGTTGATATTACCGT Ava_2162 2674416 - 2677004 + | Cl- channel, voltage gated TERM 2481 2677294 - 2677258 - f 70 -6.6 -4.08692 | gap 1 CAAGGGTTGGGAAAA GGGTGCAGGGGTATGAA TATT TGCA-ACCCTTACACCC CTATACCCTTACACC TERM 2482 2678164 - 2678184 + G 75 -10.5 -2.76743 | overlap 2678163 TTAGCTAAATTTATC GGTATTTCC CAA GGAAATGCC CTCTTGTTTGCTGTT Ava_2163 2677390 - 2678367 + | hypothetical protein Ava_2164 2678371 - 2678664 + | nitrogen regulatory protein P-II (GlnB, GlnK) TERM 2483 2679407 - 2679394 - g 73 -5.3 -4.6526 | AGAAACTGTTAAAAA TTGCT ATTG AGCAA AACGTTCTTACACAG Ava_2165 2678940 - 2679614 + | carbonic anhydrase Ava_2166 2681162 - 2679792 - | hypothetical protein TERM 2484 2681118 - 2681101 - G 70 -9.9 -2.53715 | opp_overlap 2681101 2681100, overlap 2681100 CTTAGTACCAGTAAT TGCAACC GAGG GGTTGCA GTTGGTGAGTTAGAA TERM 2485 2681101 - 2681118 + g 70 -9.9 -2.52933 | opp_overlap 2681100 2681101, overlap 2681100 CTTAGTACCAGTAAT TGCAACC GAGG GGTTGCA GTTGGTGAGTTAGAA TERM 2486 2681212 - 2681198 - R 70 -8.6 -3.07307 | opp_overlap 2681194 2681193 TAAAGCTCTAGTTAA TTCCAC TAG GTGGAA GTAAGTTATGTATCC TERM 2487 2681402 - 2681365 - R 95 -10.6 -4.61747 | opp_overlap 2681365 2681364 2681362 2681360, overlap 2681357 2681368 TGAAGAATTATAAAA TAATGGGGCAGCGACT GTAGTT AATCGCTGCCCCAAAA ATGTGTTATTTATGC TERM 2488 2681399 - 2681368 - R 100 -16.7 -4.39226 | opp_overlap 2681365 2681364 2681362 2681360, overlap 2681365 AGAATTATAAAATAA TGGGGCAGCGACT GTAGTT AATCGCTGCCCCA AAAATGTGTTATTTA Ava_2167 2681853 - 2681428 - | Beta-Ig-H3/fasciclin Ava_2168 2683370 - 2681952 - | retinal pigment epithelial membrane protein TERM 2489 2683730 - 2683743 + G 81 -5.3 -5.17353 | TCATCGCCCACTACG GTAGT CCTG ACTAC TTTTTTACTGAGTAT TERM 2490 2683823 - 2683834 + G 73 -5.8 -4.57569 | opp_overlap 2683821 2683823 TCACCGAAAATGATA CAGG TCGC CCTG TTTTTGCCCAAATGA Ava_2169 2683612 - 2684748 + | dihydrouridine synthase, DuS Ava_2170 2685883 - 2684783 - | LacI family transcription regulator TERM 2491 2685913 - 2685880 - G 90 -7.5 -5.19879 | overlap 2685851 2685881 2685883 GTGCAAAGATAAAAA GCATAGGTTATGCAC ACCT GTGCATAACCTAAAA AAAATTCTTGTGGAC TERM 2492 2685912 - 2685881 - G 84 -11 -3.70843 | overlap 2685851 2685880 2685883 TGCAAAGATAAAAAG CATAGGTTATGCAC ACCT GTGCATAACCTAAA AAAAATTCTTGTGGA TERM 2493 2685910 - 2685883 - H 100 -15.8 -3.41652 | overlap 2685851 2685881 2685880 CAAAGATAAAAAGCA TAGGTTATGCAC ACCT GTGCATAACCTA AAAAAAATTCTTGTG TERM 2494 2686270 - 2686247 - g 70 -7.4 -3.82202 | opp_overlap 2686247 GATGTCTAAAGACAA GCTGCTACGC GTCT ACGCAGCAAC TTTATTAAGTATTGT Ava_2171 2686212 - 2687243 + | periplasmic binding protein/LacI transcriptional regulator TERM 2495 2687859 - 2687885 + G 78 -7.2 -4.44448 | opp_overlap 2687855 2687857 GGATGAACCAACAGC CGCACTGTCTGA CCG TGAGACGGAGCG TTTGTTTGAGGTGAT Ava_2172 2687311 - 2688864 + | ABC transporter-like Ava_2173 2688861 - 2689859 + | inner-membrane translocator Ava_2174 2690203 - 2691795 + | S-layer region-like TERM 2496 2691817 - 2691837 + T 78 -9.8 -3.35088 | opp_overlap 2691782 2691817 TACTGACAAAACAAA TGCACCTA ACGAG TAGGTGCA TTGATTAGGCAATTT TERM 2497 2691837 - 2691817 - T 100 -9.8 -4.7878 | opp_overlap 2691817, overlap 2691782 TACTGACAAAACAAA TGCACCTA ACGAG TAGGTGCA TTGATTAGGCAATTT TERM 2498 2692096 - 2692061 - T 100 -13.4 -3.90112 | opp_overlap 2692072, overlap 2692064 GTTGCCCCAAGTAAA TGATGTAGAGACGTTG CATA CAACGTCTCTACAGCG CAGAATAAAGTGCAT TERM 2499 2692093 - 2692064 - T 100 -18.1 -3.02166 | opp_overlap 2692072, overlap 2692061 GCCCCAAGTAAATGA TGTAGAGACGTTG CATA CAACGTCTCTACA GCGCAGAATAAAGTG TERM 2500 2692156 - 2692106 - T 73 -6.5 -4.32579 | opp_overlap 2692112 2692114 2692119 ACAGCGCAGAATAAA GTGCATCAGTCAATAGT-CAAAATC AAG GTTTTTGGACTATTGACTATTG-AC TATTGACCACACTCA TERM 2501 2692114 - 2692149 + T 77 -10 -3.15503 | gap 1, opp_overlap 2692106, overlap 2692112 2692119 GAATAAAGTGCATCA GTCAATAGT-CAAAATC AAG GTTTTTGGACTATTGAC TATTGACTATTGACC Ava_2175 2692926 - 2692222 - | mobilization protein MobD-like TERM 2502 2694913 - 2694931 + G 78 -5.3 -4.91459 | TTGGTAGAATGTTAT CCTGGTT TACTC AATCAGG TTTTTATGAATATTC Ava_2176 2693647 - 2695302 + | periplasmic sensor Signal transduction histidine kinase Ava_2177 2696043 - 2695405 - | phosphoglycerate/bisphosphoglycerate mutase Ava_2178 2696424 - 2696206 - | hypothetical protein Ava_2179 2696598 - 2696972 + | hypothetical protein TERM 2503 2697529 - 2697519 - f 85 -4 -5.68023 | opp_overlap 2697519 GTATAACTAAAAAAA TTAG CTA CTAA TCTTACATAACGAGG Ava_2180 2697553 - 2697798 + | hypothetical protein Ava_2181 2698875 - 2697805 - | hypothetical protein TERM 2504 2699313 - 2699323 + G 76 -6.8 -4.5442 | GGTTTGCTGGTGATT GCTG TCT CAGC TTTTGTGGTTCAAAG Ava_2182 2699109 - 2700014 + | hypothetical protein TERM 2505 2700600 - 2700630 + G 100 -9.1 -4.75219 | gap 1, overlap 2700603 TTACAGAAGCTGACC CAGGCGATCGCG GCAATACA CGCGATCGC-TG TTTTATTGCTGCTTC TERM 2506 2700603 - 2700628 + G 100 -11.9 -3.98016 | overlap 2700600 CAGAAGCTGACCCAG GCGATCGCG GCAATACA CGCGATCGC TGTTTTATTGCTGCT Ava_2183 2700119 - 2704792 + | peptidase C14, caspase catalytic subunit p20 Ava_2184 2704789 - 2708511 + | peptidase C14, caspase catalytic subunit p20 TERM 2507 2709041 - 2709053 + G 76 -7.7 -4.08064 | opp_overlap 2709026 GCGATAACTCAAGCC TTGCG TCA CGCAA TTTTACCGAAAAGTT Ava_2185 2708819 - 2709493 + | transposase TERM 2508 2709958 - 2709940 - g 82 -6 -5.03747 | AAAGGTCTTAAAAAA GGTGAGTA TCC TAGTCACC AGTCAATTTATAGAA TERM 2509 2711031 - 2711045 + G 82 -8.6 -4.36914 | opp_overlap 2711030 GATTTTAGAGGCAAT GCTTGA CCG TCAAGC TTTTGTAGAGCAAAC Ava_2186 2709496 - 2711241 + | integrase catalytic subunit TERM 2510 2711540 - 2711551 + G 73 -5.8 -4.43309 | TTTCCAAAAACTGTG GCTC AAGA GAGC TTTTCGTTAAAATTC Ava_2187 2711251 - 2712078 + | hypothetical protein Ava_2188 2712080 - 2712601 + | hypothetical protein TERM 2511 2713600 - 2713624 + G 84 -6.5 -5.00616 | TTTGGTGATTTGTGA TGAAGCTCATA AAA TGTCAGCTTCA TTTTTTGGCGGAGAA Ava_2189 2712908 - 2716426 + | type III restriction enzyme, res subunit TERM 2512 2716584 - 2716573 - f 83 -5.8 -5.08824 | TTTTTAGTTAAAAAA GGCT AATT AGCC CATCAAGACCCTATA Ava_2190 2716683 - 2719061 + | hypothetical protein TERM 2513 2719167 - 2719188 + F 78 -5.9 -4.86731 | CTTATATTCTTTGAA GGCTTTTAA ATAA TTAAATGCC TTTTCTTTAAAAACC TERM 2514 2719462 - 2719447 - f 72 -7.6 -3.77906 | opp_overlap 2719447 AACTGAAATATACAA GGCTAA AGTA TTAGCC TAATTGCATAGGGCT Ava_2191 2719617 - 2719982 + | hypothetical protein TERM 2515 2720020 - 2720043 + F 82 -11.8 -2.80492 | opp_overlap 2720018, overlap 2720017 TAAAAACACATTATG GCTGGCTCTA AACA TAGAGTCAGC TGCTTCCTCATGGTA Ava_2192 2720098 - 2723427 + | hypothetical protein TERM 2516 2723643 - 2723624 - T 100 -13.6 -3.97088 | opp_overlap 2723624 CTTTATAAGACTAAA CCCGTCAG GTAT CTGACGGG TTTTTTGGAATTTTA TERM 2517 2723624 - 2723643 + T 100 -13.6 -5.15117 | opp_overlap 2723624 CTTTATAAGACTAAA CCCGTCAG GTAT CTGACGGG TTTTTTGGAATTTTA Ava_2193 2723971 - 2723714 - | hypothetical protein TERM 2518 2724102 - 2724136 + H 82 -7.8 -4.36914 | opp_overlap 2724102 GAGTAACAAAACAAA GGCGATCGCTTGTC TCTGGCC GGAGGGCGATCGCC TTTTGTAAAACCCCA Ava_2194 2724169 - 2724474 + | hypothetical protein TERM 2519 2724498 - 2724517 + T 71 -5 -4.5528 | opp_overlap 2724498 CTCCTATCACCTAAA GACGTG GCTAGCTG CACGTC TTTTCCTTGCTTTTA Ava_2195 2724850 - 2724599 - | XRE family transcriptional regulator Ava_2196 2724972 - 2726903 + | hypothetical protein Ava_2197 2728483 - 2729403 + | ornithine carbamoyltransferase TERM 2520 2729415 - 2729473 + F 81 -5.6 -5.21506 | opp_overlap 2729421 2729428, overlap 2729421 2729428 GTGAACAGTTAAAAG TCAAAAGTAGAAAGGCAAAAGAAAATTA ACT TATCTTTCTTTTGCCTTTTAAATTTTTA TTTTTATCTTGTTAT TERM 2521 2729466 - 2729421 - f 76 -6.5 -4.43272 | gap 1, opp_overlap 2729415 2729421 2729428, overlap 2729428 AGTTAAAAGTCAAAA GTAGAAAGGCAAAAGAAAATTA ACT TATCTTTCTTTTGCCTTT-TAA ATTTTTATTTTTATC TERM 2522 2729421 - 2729467 + F 86 -4.6 -5.71295 | opp_overlap 2729421 2729428, overlap 2729415 2729428 AGTTAAAAGTCAAAA GTAGAAAGGCAAAAGAAAATTA ACT TATCTTTCTTTTGCCTTTTAAA TTTTTATTTTTATCT TERM 2523 2729428 - 2729460 + F 91 -9.3 -4.52505 | opp_overlap 2729421 2729428, overlap 2729421 2729415 AGTCAAAAGTAGAAA GGCAAAAGAAAATTA ACT TATCTTTCTTTTGCC TTTTAAATTTTTATT TERM 2524 2729460 - 2729428 - f 91 -11.5 -4.21402 | opp_overlap 2729428 2729421 2729415, overlap 2729421 AGTCAAAAGTAGAAA GGCAAAAGAAAATTA ACT TATCTTTCTTTTGCC TTTTAAATTTTTATT Ava_2198 2729550 - 2730155 + | SOS-response transcriptional repressor, LexA Ava_2199 2730267 - 2731745 + | Type III restriction enzyme, res subunit Ava_2200 2732073 - 2732246 + | hypothetical protein Ava_2201 2732243 - 2734315 + | hypothetical protein Ava_2202 2734390 - 2735043 + | hypothetical protein TERM 2525 2736196 - 2736228 + G 81 -11.5 -2.76267 | opp_overlap 2736199, overlap 2736193 AATAATGAGGGCGAA GGAGAGGAATTTAAT CTC AGTAAATTTCTCTCC TAAATTATTTTACAT Ava_2205 2735770 - 2736231 + | hypothetical protein Ava_2206 2738281 - 2736287 - | hypothetical protein Ava_2207 2738967 - 2738287 - | hypothetical protein TERM 2526 2739062 - 2739074 + r 73 -6.3 -4.4078 | GTTAGAGAGTAGCTG GAAGT CCT ACTTC TTTTGGTTCAACAAA Ava_2208 2740646 - 2739048 - | hypothetical protein Ava_2209 2740804 - 2742504 + | hypothetical protein TERM 2527 2743825 - 2743810 - g 87 -6.2 -5.11613 | ATATCACTTAAAAAA TGCTAA AGTT TTAGCA AAGCAGCAATTAGCT Ava_2210 2742623 - 2744611 + | hypothetical protein Ava_2211 2744623 - 2745024 + | hypothetical protein Ava_2212 2748992 - 2745162 - | TPR repeat-containing protein TERM 2528 2747645 - 2747675 + g 76 -7.6 -4.08485 | GCCCCAAAGTCCCGC CCCGATTATACCAA GCC TTGTAGTAATCGGG TTTAATTTCAATAGC TERM 2529 2749192 - 2749202 + r 70 -8.2 -3.38072 | overlap 2749191 TTCAATTTTGCATCC CCGC AGC GCGG TTGATATTAACTAAA Ava_2213 2749499 - 2749254 - | hypothetical protein TERM 2530 2749592 - 2749631 + r 100 -13.6 -3.27774 | gap 1, opp_overlap 2749597, overlap 2749598 GCGTAGCGTCCCGTA GGGAAGTTCGCCCGGAGGG AAA CCCTCCTTGCG-ACTTCTC TTCCTGCTTCCCCTG TERM 2531 2749598 - 2749626 + r 78 -8.7 -3.73813 | opp_overlap 2749597, overlap 2749592 CGTCCCGTAGGGAAG TTCGCCCGGAGGG AAA CCCTCCTTGCGAC TTCTCTTCCTGCTTC Ava_2214 2750357 - 2749680 - | hypothetical protein Ava_2215 2750635 - 2752587 + | AAA ATPase, central region TERM 2532 2752682 - 2752662 - T 71 -6.9 -3.91947 | AAAACGAAAAATCAA TGGTTTAAG GAA CTAAAACCA TCAGTCAATAACTCT Ava_2216 2753055 - 2752744 - | hypothetical protein TERM 2533 2753222 - 2753189 - R 100 -10.5 -6.28631 | opp_overlap 2753189 GAAATGAAAAAAAAA TGCAAAATCCCAAAA TACG CTTTCGGATTTTGCA TTTTGAATTTCCTGT TERM 2534 2753189 - 2753222 + r 91 -9.8 -4.38313 | opp_overlap 2753189 GAAATGAAAAAAAAA TGCAAAATCCCAAA ATACGC TTTCGGATTTTGCA TTTTGAATTTCCTGT Ava_2217 2754649 - 2753243 - | glycosyl transferase family protein TERM 2535 2753591 - 2753606 + g 79 -6.8 -4.59773 | CATATCCCAAGTTTT CCGCGT ACCC ATGCGG TTTTTGAGAATCAAA TERM 2536 2753889 - 2753916 + g 70 -7.8 -3.5936 | overlap 2753863 CCCAGGGCGGTACGC TGTTGCTGGA ACCAAATA TCCAGCGACA TTTCCGCCATTTGCC TERM 2537 2754343 - 2754333 - G 73 -5.4 -4.67354 | AATATAGATACAAAA GGTA AAC TACC CTGCATCTCTTTTTG TERM 2538 2754681 - 2754671 - H 79 -3.2 -5.47218 | CTTGATCCAAAAAAA GCTA ATG CAGC CCTATTTTAACCGAG Ava_2218 2754855 - 2756072 + | peptidase M20D, amidohydrolase TERM 2539 2756097 - 2756076 - T 76 -4.4 -5.1963 | TTTAATGAATAAAAA CTCCACCC ACAAGG GGATAGAG TTTTGTCAGTAGTCA TERM 2540 2756346 - 2756309 - T 85 -7.1 -5.06414 | CTCGCGCAATAAAAA TAAGCAACAAGCCAG AGTTTCAA CTCGCTTGCTGCTCA TCATCAAAAATTATT Ava_2219 2758533 - 2756380 - | hypothetical protein TERM 2541 2759279 - 2759250 - R 100 -18.1 -4.20367 | opp_overlap 2759258 GCGCCCAATAAATAA TGTAGAGACGTTG CATG CAACGTCTCTACA GTACAGAATAAAGTG TERM 2542 2759464 - 2759486 + r 79 -11.3 -3.05816 | opp_overlap 2759457 ACAATTTAGCTGTAA CGCACCATC CCTGA GGTGGTGCG TTAGGTGCGAGGTAC Ava_2220 2759777 - 2759508 - | YciI-like protein TERM 2543 2759809 - 2759841 + r 100 -11.6 -4.88407 | gap 1, opp_overlap 2759806 2759802 2759809 2759812 ATTCAAAATTAATCA TAAGTGATGAGTTGA CACA TCA-CTCATCACTTA TTTTTAGTTAACTGC TERM 2544 2759841 - 2759809 - R 83 -11.6 -2.94735 | gap 1, opp_overlap 2759809, overlap 2759806 2759802 2759812 ATTCAAAATTAATCA TAAGTGATGAGTTGA CACA TCA-CTCATCACTTA TTTTTAGTTAACTGC TERM 2545 2759838 - 2759812 - R 75 -8.9 -3.6052 | gap 1, opp_overlap 2759809, overlap 2759809 2759806 2759802 CAAAATTAATCATAA GTGATGAGTTGA CACA TCA-CTCATCAC TTATTTTTAGTTAAC pheT 2762281 - 2759849 - | phenylalanyl-tRNA synthetase subunit beta TERM 2546 2760070 - 2760084 + g 77 -6.4 -4.59773 | overlap 2760072 TAATGGCTTTTTCGA TTTCCG AGA CGGAGA TTTTTACAGGTGCAA TERM 2547 2760550 - 2760562 + g 72 -7.7 -3.85879 | TTTCAAAACCATTCA GGGAA CCA TTCCC TTGTTCTAGGTTGTA TERM 2548 2762515 - 2762573 + r 85 -12.7 -2.75349 | gap 2, overlap 2762538 AATTGACGGTTAGTA GGGTGCGTCAGTATGAATAAATTCCTGGT ACA GCTAGGT-TTTAT-CGCACTGACGCACCC TGCATTTTAGACATT TERM 2549 2762659 - 2762637 - R 100 -7.7 -5.4833 | CTAGCTAATAAAAAA TCGGTGTAG GTTGA CTGCACCGA TAACTGCGCCGACGC Ava_2222 2763795 - 2762719 - | PilT protein-like TERM 2550 2764067 - 2764079 + G 70 -7.7 -3.59023 | AAAAAGTTAATGTTC CTAGC CTC GCTAG TTCTGCTTATGTACA TERM 2551 2764324 - 2764312 - g 70 -7.7 -3.59935 | overlap 2764310 CAATTAGCACAAATA CTAGG AAC CCTAG ATAAGCGGTTTGGGA Ava_2223 2764048 - 2765238 + | coproporphyrinogen III oxidase TERM 2552 2765233 - 2765243 + F 73 -3.2 -5.15969 | TTGTTTAGTCAGTTG GGTT AAT GACC TTTTTTGAATTCACA Ava_2224 2765480 - 2767294 + | ABC transporter-like Ava_2225 2767446 - 2769014 + | metallophosphoesterase Ava_2226 2769023 - 2769778 + | hypothetical protein Ava_2227 2769967 - 2770245 + | hypothetical protein TERM 2553 2770380 - 2770357 - T 84 -3.2 -5.68438 | gap 1, opp_overlap 2770364 2770366 2770366, overlap 2770365 2770366 TGACCAAAGAAAAAA GGATACAAGCC CCC GGATT-TATCC GTGGGGTATTTAATT TERM 2554 2770385 - 2770366 - T 73 -9.2 -2.83042 | opp_overlap 2770364 2770366 2770366, overlap 2770357 2770365 AAAAAAGGATACAAG CCCCCGGA TTTA TCCGTGGG GTATTTAATTTTGAA TERM 2555 2770366 - 2770386 + T 78 -9 -3.70102 | gap 1, opp_overlap 2770357 2770366 2770365, overlap 2770364 2770366 AAAAAAGGATACAAG CCCC-CGGA TTTA TCCGTGGGG TATTTAATTTTGAAT TERM 2556 2770366 - 2770385 + T 73 -9.2 -2.80977 | opp_overlap 2770357 2770366 2770365, overlap 2770366 2770364 AAAAAAGGATACAAG CCCCCGGA TTTA TCCGTGGG GTATTTAATTTTGAA TERM 2557 2770442 - 2770462 + T 81 -5.4 -5.24129 | GAGAAGCGACTTGAC GCACCCAA CCTAA TTGGATGC TTTTTTATCGAACAG Ava_2228 2771318 - 2770680 - | HAD family hydrolase Ava_2229 2772267 - 2771293 - | 4Fe-4S cluster binding Ava_2230 2772484 - 2772999 + | hypothetical protein TERM 2558 2773073 - 2773038 - f 72 -9.2 -2.64794 | opp_overlap 2773038 2773040 2773040 2773071, overlap 2773072 CTCAATGTCATACTA GTTTTAGTTCCTAGAT ATTT ATTTAGGAACTAAATC TTACTTAAGTAAGAG TERM 2559 2773038 - 2773073 + F 85 -11.4 -3.37344 | opp_overlap 2773038 2773072, overlap 2773040 2773040 2773071 CTCAATGTCATACTA GTTTTAGTTCCTAGAT ATTT ATTTAGGAACTAAATC TTACTTAAGTAAGAG TERM 2560 2773040 - 2773071 + F 90 -12.6 -3.25652 | opp_overlap 2773038, overlap 2773038 2773040 CAATGTCATACTAGT TTTAGTTCCTAGAT ATTT ATTTAGGAACTAAA TCTTACTTAAGTAAG TERM 2561 2773455 - 2773443 - g 72 -7.7 -3.794 | opp_overlap 2773447 GCCCAAGGTATCAAA GCTGA CCC TCAGC AGGGATTGCTGGAAA Ava_2231 2773170 - 2773643 + | steroid delta-isomerase Ava_2232 2774099 - 2773659 - | hypothetical protein TERM 2562 2774292 - 2774325 + r 70 -8.2 -3.38072 | opp_overlap 2774292 AGGAGATAGAACAAA GCGATCGCCTATCA TAAAAC TAATAAGCGATCGC TTCATATTAGCTGAA TERM 2563 2774325 - 2774292 - R 100 -12.6 -4.43576 | opp_overlap 2774292 AGGAGATAGAACAAA GCGATCGCCTATCA TAAAAC TAATAAGCGATCGC TTCATATTAGCTGAA Ava_2233 2775484 - 2774345 - | hypothetical protein TERM 2564 2776734 - 2776724 - g 75 -3.2 -5.17576 | GAGCAAGCCAAAAAA CAAG CTC CCTG TATCGTCTTCATCGA Ava_2234 2775932 - 2777869 + | FtsH-2 peptidase TERM 2565 2777982 - 2778034 + T 100 -16.6 -4.36778 | gap 1, opp_overlap 2777983, overlap 2777983 AGCGCACCCTTACTA ACTT-TTGTCCCCCACTGAATTTGT TACT ACGAATTCAGTGGGGGACATTAAGC TTTTAACTTCTCTTT TERM 2566 2778033 - 2777983 - T 100 -17.9 -3.15544 | gap 1, opp_overlap 2777982 2777983 GCGCACCCTTACTAA CTT-TTGTCCCCCACTGAATTTGT TACT ACGAATTCAGTGGGGGACATTAAG CTTTTAACTTCTCTT TERM 2567 2777983 - 2778033 + T 100 -20.1 -3.2044 | gap 1, opp_overlap 2777983, overlap 2777982 GCGCACCCTTACTAA CTT-TTGTCCCCCACTGAATTTGT TACT ACGAATTCAGTGGGGGACATTAAG CTTTTAACTTCTCTT TERM 2568 2778099 - 2778085 - T 74 -3.6 -5.0916 | overlap 2778067 TGGGTAATAGAAAAA CCAATT ACC AATTAG CCATTACCCATCATC Ava_2235 2780147 - 2778147 - | hypothetical protein TERM 2569 2779953 - 2779931 - G 74 -4 -4.98616 | overlap 2779932 CCAAAACAGCAAAAA TCCGCCGCAA AAC TTGCAGTGGT CGATGACGATAATGC TERM 2570 2781422 - 2781412 - g 78 -4 -5.1287 | overlap 2781417 CCTACAGCGAAAAAA TTCA AGC TGAA TTGGCAGCCCTCAAC Ava_2236 2780403 - 2782151 + | DNA repair protein RecN Ava_2237 2782781 - 2782167 - | hypothetical protein Ava_2238 2784150 - 2782930 - | hypothetical protein Ava_2239 2787674 - 2784204 - | adenylate/guanylate cyclase TERM 2571 2784329 - 2784313 - G 70 -7.3 -3.90744 | TCGTCTTGTAAATAA TCTGCTA CAG CAGCAGA AACCAAGATTGTACC TERM 2572 2785762 - 2785793 + g 75 -6 -4.73448 | gap 1, opp_overlap 2785772, overlap 2785769 GTAAATTTCATGGCA TTTGAT-AGGAGGTT ATA AACCACCTTGTCAAA TTTTTCCATGTCTAT Ava_2240 2788191 - 2788904 + | GCN5-related N-acetyltransferase TERM 2573 2789847 - 2789865 + G 82 -6 -4.9218 | TCGGACGTTCTGACA CTTCTGCA CAG TGGAGAAG TTTTTATCGTCAATA Ava_2241 2789718 - 2790257 + | hypothetical protein Ava_2242 2791454 - 2790312 - | histidinol-phosphate aminotransferase Ava_2243 2792206 - 2791553 - | hypothetical protein TERM 2574 2791838 - 2791850 + g 73 -5.5 -4.64334 | opp_overlap 2791838 ACCATAATGGTAAAC CGGGT AAT ATCCG TTTTGTTGCCAACTT TERM 2575 2791921 - 2791911 - G 79 -3.2 -5.27923 | CAATGGGATAAAAAA CCAA ATG CTGG CGCTAATAAAACTAA Ava_2244 2793813 - 2792437 - | glutathione reductase TERM 2576 2793129 - 2793154 + g 76 -10.5 -3.04122 | overlap 2793120 2793126 CAACTGCTGTGACTA CGGTATTTGGG ATAA TCCGAATACCG TGATTTGTCATGCCA Ava_2245 2795544 - 2793988 - | hydantoinase B/oxoprolinase Ava_2246 2797725 - 2795629 - | hydantoinase/oxoprolinase Ava_2247 2798244 - 2797822 - | hypothetical protein TERM 2577 2798350 - 2798335 - R 95 -10.4 -4.62441 | GCTGATATAAATAAA GTCCGC TTGC GCGGAC TACGGACATTGGATA Ava_2248 2799238 - 2798687 - | PadR family transcriptional regulator Ava_2249 2799363 - 2800562 + | secretion protein HlyD Ava_2250 2800579 - 2801736 + | DevC protein Ava_2251 2801765 - 2802442 + | ABC transporter-like Ava_2252 2802629 - 2804197 + | alkaline phosphatase recR 2804453 - 2805010 + | recombination protein RecR TERM 2578 2805075 - 2805039 - T 100 -17.5 -4.64591 | opp_overlap 2805045, overlap 2805045 TAACTATAGATAAAA CAAAAAGGCGCTCTC TAATAAC GAGAGCGCCTTTTCG TAAAAATAGAACCTG TERM 2579 2805045 - 2805069 + T 95 -12.9 -4.26076 | opp_overlap 2805045 2805039 TAGATAAAACAAAAA GGCGCTCTC TAATAAC GAGAGCGCC TTTTCGTAAAAATAG TERM 2580 2805069 - 2805045 - T 100 -12.9 -5.58522 | opp_overlap 2805045, overlap 2805039 TAGATAAAACAAAAA GGCGCTCTC TAATAAC GAGAGCGCC TTTTCGTAAAAATAG TERM 2581 2805392 - 2805404 + T 71 -9.1 -3.1634 | AGCACTCATCTTGAG GTGGG CTT CCCAC TTAGATGCTTTCAGC TERM 2582 2806759 - 2806787 + T 75 -9.5 -3.23274 | opp_overlap 2806756, overlap 2806755 2806786 AGAGTGGACGAACCT GGCTCTGGAACCC TTA GGGTTTCGGGGCA TTGGATTCTCACCAA TERM 2583 2807579 - 2807590 + T 75 -7.2 -4.2354 | ATGTTCTATTTCACT CCCC TTGC GGGG TTCTTTTCACCTTTC TERM 2584 2808196 - 2808224 + T 70 -9 -3.10481 | gap 1, overlap 2808195 TGGCTAGGTTTTCAC CCAGCAGTCTAAC TTCC GTTAG-TTGCTGG ATTGTTTCTATCTAG TERM 2585 2808821 - 2808807 - T 75 -5.6 -4.8622 | GCTGGCAACTAAAAA CGAGGG TTG CGCTCG TTGCGGGACTTAACC Ava_2254 2810862 - 2810188 - | LuxR family transcriptional regulator TERM 2586 2810950 - 2810933 - H 83 -6.3 -5.1166 | CAGCAAAACTAAAAA GCGACTA TAAC TAATCGC GCTAGGAGAAGCACA Ava_2255 2810965 - 2811618 + | hypothetical protein TERM 2587 2811647 - 2811703 + T 87 -13.4 -2.53263 | opp_overlap 2811655 2811659 2811663, overlap 2811654 2811659 2811663 GATATTAACGAGTGC AATCATAATAAATAAAGGGGATACCT AATTA AGGTGTTCCCTTTATTTAATGTGATA TACATTCGGAATAAG TERM 2588 2811654 - 2811696 + T 84 -12.3 -2.87522 | opp_overlap 2811655 2811659 2811663, overlap 2811647 2811659 2811663 ACGAGTGCAATCATA ATAAATAAAGGGGATACCT AATTA AGGTGTTCCCTTTATTTAA TGTGATATACATTCG TERM 2589 2811695 - 2811655 - T 87 -11.4 -3.51825 | opp_overlap 2811654 2811647 2811659 2811663, overlap 2811659 2811663 CGAGTGCAATCATAA TAAATAAAGGGGATACCT AATTA AGGTGTTCCCTTTATTTA ATGTGATATACATTC TERM 2590 2811691 - 2811659 - T 82 -7.8 -4.3953 | opp_overlap 2811654 2811647 2811659 2811663, overlap 2811655 2811663 TGCAATCATAATAAA TAAAGGGGATACCT AATTA AGGTGTTCCCTTTA TTTAATGTGATATAC TERM 2591 2811659 - 2811691 + T 93 -12.2 -3.8766 | opp_overlap 2811659 2811655 2811663, overlap 2811654 2811647 2811663 TGCAATCATAATAAA TAAAGGGGATACCT AATTA AGGTGTTCCCTTTA TTTAATGTGATATAC TERM 2592 2811687 - 2811663 - T 71 -4.2 -4.7458 | opp_overlap 2811659 2811654 2811647 2811663, overlap 2811659 2811655 ATCATAATAAATAAA GGGGATACCT AATTA AGGTGTTCCC TTTATTTAATGTGAT TERM 2593 2811663 - 2811687 + T 90 -8.6 -4.54205 | opp_overlap 2811663 2811659 2811655, overlap 2811659 2811654 2811647 ATCATAATAAATAAA GGGGATACCT AATTA AGGTGTTCCC TTTATTTAATGTGAT Ava_2256 2812154 - 2811759 - | hypothetical protein Ava_2257 2812802 - 2813554 + | red chlorophyll catabolite reductase TERM 2594 2813625 - 2813613 - f 80 -9.1 -3.87075 | AGCAGTTGCTACAAA TCGGG CAA CCCGA CGACAGTCGCTTCAA Ava_2258 2813704 - 2815125 + | aldehyde dehydrogenase TERM 2595 2815184 - 2815159 - f 73 -9.7 -2.54504 | gap 1, opp_overlap 2815158 2815157, overlap 2815158 2815156 ATTTCTGAAATATAC GTAG-GGTGGGC ATT GCCCACCACAAC CATTTCCTGATATAT Ava_2259 2815323 - 2816603 + | 3-phosphoshikimate 1-carboxyvinyltransferase hisS 2816637 - 2818025 + | histidyl-tRNA synthetase Ava_2261 2818139 - 2818540 + | hypothetical protein Ava_2262 2819049 - 2818588 - | hypothetical protein Ava_2263 2819160 - 2820050 + | binding-protein dependent transport system inner membrane protein Ava_2264 2820162 - 2820365 + | hypothetical protein TERM 2596 2820400 - 2820424 + F 70 -6.5 -4.03078 | opp_overlap 2820400 CCAAATGGGTAATTA TCGTCAGCT CAATCAA AGCTGATGA TTTCTGCTGTGGTGG Ava_2265 2820421 - 2821356 + | ROK Ava_2266 2821821 - 2821399 - | hypothetical protein TERM 2597 2821636 - 2821652 + g 73 -5.9 -4.50583 | overlap 2821638 CACAGTAGTCACTTG TTCTAGA TAT TCTAGGA TTTTGTGATAGTCTT Ava_2267 2823717 - 2822080 - | CTP synthetase TERM 2598 2822249 - 2822221 - G 100 -8.9 -5.47431 | opp_overlap 2822227 GCAAGAGATAAAAAA TGGATGTTGTGGA TAT TCCACAATTTCCA CTAGGCGGCCATCAG TERM 2599 2822227 - 2822243 + g 78 -9.5 -3.59979 | opp_overlap 2822221 GATAAAAAATGGATG TTGTGGA TAT TCCACAA TTTCCACTAGGCGGC TERM 2600 2823284 - 2823259 - G 71 -4.8 -4.59511 | gap 1 AATAGCTTCTAAAAA CGGT-AGTGAT TCAAT ATCACCCACCG TCCCACCAATTTCGG Ava_2268 2823814 - 2825571 + | cell wall hydrolase/autolysin Ava_2269 2826031 - 2825687 - | XisI protein-like Ava_2270 2826435 - 2826019 - | fdxN element excision controlling factor XisH Ava_2271 2826804 - 2826553 - | hypothetical protein Ava_2272 2827378 - 2826875 - | hypothetical protein Ava_2273 2829522 - 2827411 - | hypothetical protein Ava_2274 2830129 - 2829929 - | hypothetical protein Ava_2275 2830630 - 2830181 - | NUDIX hydrolase Ava_2276 2832142 - 2830931 - | TetR family transcriptional regulator TERM 2601 2832167 - 2832151 - H 100 -9.5 -5.06089 | overlap 2832156 AAACCATAAACAAAA TGCAAGT GCT ACTTGCA CAAAAAGAAAGTGAA Ava_2277 2832413 - 2833270 + | Delta-9 acyl-phospholipid desaturase Ava_2278 2833767 - 2833261 - | methylated-DNA-(protein)-cysteine S-methyltransferase TERM 2602 2833405 - 2833429 + g 77 -8.5 -4.0257 | overlap 2833398 AAGTGAATTTGCCAA GCCGACAGC GCGATAA GCAGTCGGC TTATTAATTTTTGCC Ava_2279 2834085 - 2836364 + | glycoside hydrolase family protein Ava_2280 2836574 - 2837254 + | hypothetical protein TERM 2603 2837341 - 2837311 - T 86 -6.8 -5.08088 | opp_overlap 2837311 AATTCTCAATAAAAA GCGATCGCCTAATT TGG AGTTGTGCGATCGC TTAATAATGGGAGTT TERM 2604 2837311 - 2837341 + T 80 -11.2 -3.21595 | opp_overlap 2837311 AATTCTCAATAAAAA GCGATCGCCTAATT TGG AGTTGTGCGATCGC TTAATAATGGGAGTT Ava_2281 2837608 - 2837384 - | hypothetical protein Ava_2282 2837891 - 2838841 + | LysR family transcriptional regulator TERM 2605 2838855 - 2838886 + F 90 -13.3 -2.87344 | opp_overlap 2838853 2838852, overlap 2838860 2838864 GATATTGAGGAATCT GGTAATAGGTAAT TGGATT ATTACCTATTACC TATATCGGCAGGGTA TERM 2606 2839042 - 2839019 - f 82 -6.8 -5.05601 | opp_overlap 2839019 TACGACAGATAAAAA CACAGATATA TTCA TCTATCTGTG TTTTTTTGCGTTTGT TERM 2607 2839019 - 2839042 + F 93 -6.8 -5.59564 | opp_overlap 2839019 TACGACAGATAAAAA CACAGATATA TTCA TCTATCTGTG TTTTTTTGCGTTTGT TERM 2608 2840768 - 2840755 - g 74 -6.7 -4.33674 | AAGACAGAATAGAAA GCGAT CGCG ATCGC CTAGAGGAAATGCTG Ava_2283 2839134 - 2841554 + | sucrose synthase, glycosyl transferase, group 1 TERM 2609 2841654 - 2841689 + T 79 -10.6 -3.14132 | opp_overlap 2841679 TGGGTGGAGCGATAG CGGAACCCAACA AAGTCTTGAGAA TGTTGGGTTCCG TTCCTCCACCCAACC Ava_2284 2842375 - 2841779 - | peptidoglycan binding domain-containing protein TERM 2610 2842439 - 2842426 - R 74 -2.5 -5.29742 | ACAGAAAAAAATAAA TTATT CCGG AATAA CGTCTACTTAAATCT Ava_2285 2843412 - 2843068 - | hypothetical protein Ava_2286 2844966 - 2843485 - | hypothetical protein Ava_2287 2845119 - 2845616 + | pyridoxamine 5'-phosphate oxidase-related, FMN-binding Ava_2288 2845631 - 2846521 + | Alpha/beta hydrolase fold TERM 2611 2846585 - 2846612 + T 76 -10 -2.93435 | opp_overlap 2846587 2846592, overlap 2846587 TTGCGGGTGTTCAGA TACCCAACTTTT TTAA AAAAGTCGGGTA TCTATGACTGATTAG TERM 2612 2846610 - 2846587 - T 77 -10.4 -2.87132 | opp_overlap 2846587 2846585, overlap 2846592 GCGGGTGTTCAGATA CCCAACTTTT TTAA AAAAGTCGGG TATCTATGACTGATT Ava_2289 2847123 - 2846650 - | hypothetical protein TERM 2613 2847096 - 2847083 - G 95 -8.1 -4.97402 | overlap 2847086 2847092 GAAAAGTTAGAAAAA CAGCC ATAA GGCTG CCAAACCTTATAAAA TERM 2614 2847219 - 2847255 + H 70 -9 -2.96321 | opp_overlap 2847218, overlap 2847216 GGGATTGAAAGCTAT TATTTGTCTGAAGATA GAGGA TATTTTCAGACAAAAA TCATATTTTGGTGAA Ava_2290 2847293 - 2847781 + | hypothetical protein Ava_2291 2847821 - 2848426 + | hypothetical protein Ava_2292 2848423 - 2849508 + | hypothetical protein TERM 2615 2849669 - 2849611 - f 70 -8.4 -3.35597 | gap 2, overlap 2849613 2849614 TTGATTTTTGAAATA CACGTAGGGTGGGCATTGCCCACA GGCTCATGGTTGT GGTGGGCAATGCCCACCCTACA-- GATACTGAGAATTTT TERM 2616 2849669 - 2849613 - f 100 -20.4 -3.24708 | overlap 2849611 2849614 GATTTTTGAAATACA CGTAGGGTGGGCATTGCCCACA GGCTCATGGTTGT GGTGGGCAATGCCCACCCTACA GATACTGAGAATTTT TERM 2617 2849668 - 2849614 - f 100 -21.7 -2.54504 | overlap 2849611 2849613 ATTTTTGAAATACAC GTAGGGTGGGCATTGCCCACA GGCTCATGGTTGT GGTGGGCAATGCCCACCCTAC AGATACTGAGAATTT Ava_2293 2850002 - 2850952 + | ATPase associated with various cellular activities TERM 2618 2851991 - 2851977 - g 75 -7.2 -4.24342 | GGGCGCAGTAACAAA TGTTGT CAG ACAACA AACTCGTCGCGCATT Ava_2294 2851015 - 2852325 + | hypothetical protein TERM 2619 2852418 - 2852383 - T 73 -6.2 -4.41348 | opp_overlap 2852385 2852394, overlap 2852386 GTTGCGCTAAATAAA TGATGTAGAGACGTTG TATG CAATGTCTCTACAGTA CTCTCACACCCGATC TERM 2620 2852385 - 2852416 + T 78 -11 -2.62184 | opp_overlap 2852383 2852386, overlap 2852394 TGCGCTAAATAAATG ATGTAGAGACGTTG TATG CAATGTCTCTACAG TACTCTCACACCCGA TERM 2621 2852415 - 2852386 - T 87 -12.3 -3.18452 | opp_overlap 2852385 2852394, overlap 2852383 GCGCTAAATAAATGA TGTAGAGACGTTG TATG CAATGTCTCTACA GTACTCTCACACCCG Ava_2295 2854015 - 2852492 - | TonB-like TERM 2622 2853968 - 2853957 - G 71 -2.2 -5.15969 | CTGTAAGTTAAAAAA GACT GGAG AGCC TTAACTTCCTTGGAA Ava_2296 2854997 - 2854212 - | hypothetical protein TERM 2623 2854252 - 2854269 + g 72 -7.7 -3.90291 | TTAGCTAATTGTAAT TCTAGGC GATC GCCTGGA TTTGGTTCCAACACT TERM 2624 2855124 - 2855104 - R 88 -7.5 -4.79949 | TGCCCAAAAAAAGAA GGATGAGCA AAT CGCCCACCC TAAATAATTTTGCTT atpC 2855560 - 2855147 - | F0F1 ATP synthase subunit epsilon TERM 2625 2855651 - 2855615 - R 79 -11.1 -3.03124 | TGCCAGTTGCCAATA GTCAGTAGTCAGT CATACAAATCT ACTGACTACTGAC TACTGACTACTAACA Ava_2298 2857117 - 2855669 - | F0F1 ATP synthase subunit beta TERM 2626 2856365 - 2856325 - G 76 -7.8 -4.20696 | GTACGAACCGGAAAA TGTTGTCAATAAACAACA GTACG TCTTGCTTATTGACATCA CGGAAGTATTCAGCC TERM 2627 2857399 - 2857374 - R 100 -8.3 -6.01725 | opp_overlap 2857379, overlap 2857392 AACAAAAACAAAAAA GAAGCGACTCT CTAC AGAGCCTCTTC CCTCGGAAAAATCAA Ava_2299 2858309 - 2857497 - | hypothetical protein Ava_2300 2859351 - 2859118 - | hypothetical protein Ava_2301 2860836 - 2859943 - | binding-protein dependent transport system inner membrane protein Ava_2302 2861965 - 2860883 - | extracellular solute-binding protein Ava_2303 2863110 - 2861965 - | spermidine/putrescine ABC transporter ATP-binding subunit Ava_2304 2863716 - 2865548 + | peptidoglycan glycosyltransferase TERM 2628 2865565 - 2865607 + T 91 -9.3 -4.41895 | opp_overlap 2865566 2865569, overlap 2865566 ACTAATTCCCAATAA AGAAGCTTAGGGGTAAG ACCGTTTAC CTTACCCCTAAACTTCC TTTTAATTACAAATT TERM 2629 2865566 - 2865606 + T 90 -12.8 -3.24414 | opp_overlap 2865566 2865569, overlap 2865565 CTAATTCCCAATAAA GAAGCTTAGGGGTAAG ACCGTTTAC CTTACCCCTAAACTTC CTTTTAATTACAAAT TERM 2630 2865606 - 2865566 - T 100 -16.4 -4.183 | opp_overlap 2865566 2865565, overlap 2865569 CTAATTCCCAATAAA GAAGCTTAGGGGTAAGAC CGTTT ACCTTACCCCTAAACTTC CTTTTAATTACAAAT TERM 2631 2865603 - 2865569 - T 93 -12.3 -4.20768 | opp_overlap 2865566 2865565, overlap 2865566 ATTCCCAATAAAGAA GCTTAGGGGTAAGAC CGTTT ACCTTACCCCTAAAC TTCCTTTTAATTACA Ava_2305 2866045 - 2865641 - | biopolymer transport protein ExbD/TolR Ava_2306 2866682 - 2866029 - | MotA/TolQ/ExbB proton channel TERM 2632 2866220 - 2866237 + g 71 -4 -4.87665 | AAGCTTCACTAATAC CCGCCG TCACAC CTGCGG TTTTTGTCCCTCCCA Ava_2307 2867348 - 2867842 + | hypothetical protein TERM 2633 2868474 - 2868486 + G 75 -3.3 -5.12172 | ATGGCAAGTTAATCT CAAGC CTC GCCTG TTTTATTTCTTAATG Ava_2308 2868142 - 2869827 + | NAD(P)H-quinone oxidoreductase subunit 4 TERM 2634 2869854 - 2869878 + F 100 -10 -5.74086 | AGATAATAAGTTAGG CGATCGCTTC TTTGT GGGGCGATCG TTTTTTCTTTGGTTT Ava_2309 2869947 - 2870522 + | hypothetical protein Ava_2310 2871930 - 2870554 - | phospholipid/glycerol acyltransferase TERM 2635 2873270 - 2873252 - g 70 -5.4 -4.41616 | ATTGCTGCAAATAAA CAAATTCA TCC TAAATTTG TCCGGTTCGTTGATA TERM 2636 2873330 - 2873308 - g 71 -2.1 -5.08824 | gap 1 CGTTGATTTAAAAAA CTTCA-TTAC AGGT GCAAATGAAG CTGGTTATCACGTTG TERM 2637 2873565 - 2873552 - g 71 -2.3 -5.10208 | opp_overlap 2873552 CAAGGTGAAGAAAAA CCCCT GGTG ATGGG TTGCTACGGTGTGGG Ava_2311 2872157 - 2873971 + | prolyl-tRNA synthetase TERM 2638 2874012 - 2873976 - f 75 -9.6 -3.15161 | opp_overlap 2873977 2873979 2873984, overlap 2873973 2873974 AGAAAAATTAAATTA TGAGGAAATGAGACTA TTTAT TACTCTCATTTCCTCT GTATCTCTCATTCAA TERM 2639 2873977 - 2874011 + F 93 -13.1 -3.08278 | opp_overlap 2873976 2873973 2873974, overlap 2873979 2873984 GAAAAATTAAATTAT GAGGAAATGAGACTA TTTAT TACTCTCATTTCCTC TGTATCTCTCATTCA TERM 2640 2873979 - 2874009 + F 76 -9.9 -3.09313 | opp_overlap 2873976 2873973 2873974, overlap 2873977 2873984 AAAATTAAATTATGA GGAAATGAGACTA TTTAT TACTCTCATTTCC TCTGTATCTCTCATT Ava_2312 2874566 - 2875180 + | hypothetical protein Ava_2313 2875574 - 2875230 - | ArsR family transcriptional regulator Ava_2314 2876327 - 2875779 - | biotin carboxyl carrier protein Ava_2315 2877091 - 2876534 - | elongation factor P TERM 2641 2877613 - 2877597 - g 75 -8.7 -3.71991 | CACAAATCCTAACAA GCGTTCC GGA AGAACGC CAAACTCAAGCTGAA TERM 2642 2877749 - 2877701 - g 76 -7.8 -4.22749 | gap 1, opp_overlap 2877710, overlap 2877702 AAAGATAAAGAACAA GTTCTACTAGAGAGAGCTAAATT ACTT AATTTAG-TCTCTCTTATAGAAG AATCAATGGTGAAGG TERM 2643 2877748 - 2877702 - g 84 -11.3 -3.11209 | gap 1, opp_overlap 2877710, overlap 2877701 AAGATAAAGAACAAG TTCTACTAGAGAGAGCTAAATT ACTT AATTTAG-TCTCTCTTATAGAA GAATCAATGGTGAAG TERM 2644 2877710 - 2877740 + G 74 -9.3 -3.29511 | gap 1, opp_overlap 2877702 2877701 GAACAAGTTCTACTA GAGAGAGCTAAATT ACTT AATTTAG-TCTCTC TTATAGAAGAATCAA Ava_2316 2877284 - 2878390 + | peptidyl-prolyl cis-trans isomerase, cyclophilin type TERM 2645 2878458 - 2878423 - f 100 -12 -4.41348 | opp_overlap 2878434, overlap 2878426 GTTGCGCCAAATAAA TGATGTAGAGACGTTG CCTA CAACGTCTCTACAGTA CAGAATAAGGTTCAT TERM 2646 2878455 - 2878426 - f 100 -18.1 -3.18452 | opp_overlap 2878434, overlap 2878423 GCGCCAAATAAATGA TGTAGAGACGTTG CCTA CAACGTCTCTACA GTACAGAATAAGGTT TERM 2647 2879261 - 2879239 - g 71 -4.9 -4.63932 | gap 1 TACCCCCGAAGAAAA GGC-GGCTTT AATT AAAGCCCACC AGCGTCCCCAGCCAC TERM 2648 2879659 - 2879628 - g 100 -8.8 -5.20783 | opp_overlap 2879628 2879646 ATCGAAACACAAAAA TCCCTGACCAAG TACTCACC CTCAGTCAGGGA TTTCAACATTTTAGT Ava_2317 2878682 - 2879680 + | thiamine monophosphate kinase Ava_2318 2880764 - 2879751 - | glyceraldehyde-3-phosphate dehydrogenase TERM 2649 2880910 - 2880873 - R 93 -3.5 -6.13 | opp_overlap 2880878 2880879, overlap 2880880 AGATCCAAAAAAAAA CACATATTTTATTCAGA ATCT TCTGAGTAAAGCTTGTG ATCAGCGATGTAGGA Ava_2319 2881507 - 2880881 - | nicotinate-nucleotide adenylyltransferase TERM 2650 2881261 - 2881283 + g 76 -2.6 -5.40072 | CGGTCAAGGTGTTAA TCGCGTAAGA AAC TCCTGAGCGA TTTTTTTCCACAGAG murC 2881914 - 2883398 + | UDP-N-acetylmuramate--L-alanine ligase Ava_2321 2883519 - 2884514 + | UDP-N-acetylmuramate dehydrogenase TERM 2651 2884642 - 2884629 - f 76 -3.1 -5.40072 | gap 1, overlap 2884631 GTTTTGGTAAAAAAA GAGGCA AAC TGCC-C ACCACATCTATAATT TERM 2652 2884641 - 2884631 - f 73 -6.8 -4.34482 | overlap 2884629 TTTGGTAAAAAAAGA GGCA AAC TGCC CACCACATCTATAAT Ava_2322 2884699 - 2885046 + | hypothetical protein Ava_2323 2885261 - 2885734 + | protein tyrosine phosphatase Ava_2324 2886510 - 2885773 - | two component LuxR family transcriptional regulator smpB 2887118 - 2887585 + | SsrA-binding protein Ava_2326 2887807 - 2888094 + | hypothetical protein Ava_2327 2889692 - 2888265 - | O-antigen polymerase TERM 2653 2889709 - 2889697 - R 82 -7.7 -4.51799 | ACTAAATTCATAAAA CAAGC TGC GCTTG ATTAGCAAGCCCCTA Ava_2328 2891416 - 2889860 - | GAF sensor Signal transduction histidine kinase TERM 2654 2891789 - 2891801 + H 72 -7.7 -3.78775 | ATCTTCTACAGTTTA TCTGC TAT GCAGA TTTAATAGTAGAGAA TERM 2655 2891954 - 2891988 + H 82 -10.3 -3.57971 | opp_overlap 2891954 2891959, overlap 2891959 TCTTGACGGACAAAA TAAAACTCTCAAGTT CGAGA AAATTGAGAGTTTTA TTTGGCGATCGCTCT TERM 2656 2891988 - 2891954 - H 95 -11 -4.42386 | opp_overlap 2891954 2891959, overlap 2891959 TCTTGACGGACAAAA TAAAACTCTCAAGTTC GAG AAAATTGAGAGTTTTA TTTGGCGATCGCTCT TERM 2657 2891983 - 2891959 - H 86 -6.5 -5.19275 | opp_overlap 2891954 2891959, overlap 2891954 ACGGACAAAATAAAA CTCTCAAGTTC GAG AAAATTGAGAG TTTTATTTGGCGATC TERM 2658 2891959 - 2891983 + H 78 -5.8 -4.87803 | opp_overlap 2891959 2891954, overlap 2891954 ACGGACAAAATAAAA CTCTCAAGTT CGAGA AAATTGAGAG TTTTATTTGGCGATC TERM 2659 2892130 - 2892120 - H 76 -6.8 -4.43283 | overlap 2892116 TGAGATAAATACAAA CCCA ATT TGGG AATACTAACTAAAGT Ava_2329 2892214 - 2893614 + | hypothetical protein TERM 2660 2893648 - 2893631 - T 100 -7 -5.85737 | opp_overlap 2893630 ATATCAATAAAAAAA GCGAAC TTTCGG GTTCGC CTTCAATCATTCTCT Ava_2330 2895087 - 2893684 - | light-independent protochlorophyllide reductase subunit N TERM 2661 2894558 - 2894575 + g 71 -3.4 -5.05079 | overlap 2894559 AAATTTAACAGTTTT TGAACG GCATTA CGTTCG TTTTTCTCTGCTTCT TERM 2662 2894982 - 2894971 - G 71 -4.4 -4.81083 | opp_overlap 2894971 TCCAATTACCAAAAA GAAG CTAT CTTC AATTTTTTGGTATAA Ava_2331 2895995 - 2895237 - | hypothetical protein chlL 2896948 - 2896025 - | protochlorophyllide reductase iron-sulfur ATP-binding protein TERM 2663 2897082 - 2897064 - R 81 -9 -4.07678 | opp_overlap 2897059 2897070, overlap 2897067 TGCTAAAAGACTAAA TAATGCTT TTT AAGCATTA AAAATATTTAAAAAC TERM 2664 2897431 - 2897387 - R 75 -10.1 -2.80464 | opp_overlap 2897387 2897389, overlap 2897386 2897389 GGATCAATGCCAAAT TATTCACCCTATGGTTGTGGC TGA ACCACAATCATAGAGAGGATA TTAGCTAAACAAAAT TERM 2665 2897387 - 2897431 + r 83 -11.6 -3.05463 | opp_overlap 2897386 2897387 2897389, overlap 2897389 GGATCAATGCCAAAT TATTCACCCTATGGTTGTGG CTGAA CCACAATCATAGAGAGGATA TTAGCTAAACAAAAT TERM 2666 2897389 - 2897429 + r 76 -9.8 -3.08679 | opp_overlap 2897389 2897387 2897386, overlap 2897387 ATCAATGCCAAATTA TTCACCCTATGGTTGTGG CTGAA CCACAATCATAGAGAGGA TATTAGCTAAACAAA Ava_2333 2897778 - 2897482 - | hypothetical protein Ava_2334 2898635 - 2898009 - | hypothetical protein TERM 2667 2899048 - 2899038 - g 71 -3.2 -5.00642 | CAATTTACAGAAAAA GCCT GGG AAGC GATCGCCCACACTCC Ava_2335 2899002 - 2901620 + | ATPase TERM 2668 2901640 - 2901667 + T 100 -13.5 -5.75599 | opp_overlap 2901646 2901647 ATCCAGATTGGTTCG CGCAAAGGCGC AAAGGC GCGTCTTTGCG TTTTTTTGTAATTTA TERM 2669 2901784 - 2901726 - T 100 -19.4 -2.83715 | opp_overlap 2901736 2901742 2901779 2901782, overlap 2901742 GTTACTACTAGTACA TTGAGATTGAT-AGAAAGGCGATCGCCT AACTG ATGCGATCGCCTTTCTCATCA-TCTCAA GCATGGAGATTTGCT TERM 2670 2901736 - 2901775 + T 88 -13.1 -2.62616 | gap 1, opp_overlap 2901726 2901742, overlap 2901742 GTACATTGAGATTGA T-AGAAAGGCGATCGCCT AACTG ATGCGATCGCCTTTCTCA TCATCTCAAGCATGG TERM 2671 2901768 - 2901742 - T 93 -12.3 -4.07868 | opp_overlap 2901742 2901736, overlap 2901726 TGAGATTGATAGAAA GGCGATCGCCT AACTG ATGCGATCGCC TTTCTCATCATCTCA TERM 2672 2901742 - 2901768 + T 93 -12.3 -4.00782 | opp_overlap 2901726 2901742, overlap 2901736 TGAGATTGATAGAAA GGCGATCGCCT AACTG ATGCGATCGCC TTTCTCATCATCTCA Ava_2336 2902041 - 2901781 - | hypothetical protein Ava_2337 2902428 - 2902802 + | hypothetical protein Ava_2338 2902876 - 2903109 + | hypothetical protein Ava_2340 2904421 - 2903558 - | aminoglycoside phosphotransferase Ava_2339 2903267 - 2903617 + | hypothetical protein TERM 2673 2904503 - 2904471 - TR 77 -10 -3.13163 | overlap 2904465 2904469 2904467 TAGGATTAACACATA GGGTATGAGAAACT TACGT ATTTTCTCACACCC AATTCCCAATCTACG Ava_2341 2905794 - 2904514 - | peptidase M16-like Ava_2342 2905961 - 2907478 + | amine oxidase Ava_2343 2907610 - 2907969 + | hypothetical protein TERM 2674 2908006 - 2907976 - T 100 -14.9 -3.10017 | overlap 2907978 2907997 AATTTTTAATAGAGA TATCCCCGACTCT TCTAG AAAGTCGGGGATA TAAAGATAATCGCCA TERM 2675 2908004 - 2907978 - T 93 -13.1 -3.10493 | overlap 2907976 2907997 TTTTTAATAGAGATA TCCCCGACTCT TCTAG AAAGTCGGGGA TATAAAGATAATCGC Ava_2344 2908641 - 2908030 - | hypothetical protein Ava_2345 2909047 - 2909709 + | hypothetical protein TERM 2676 2910310 - 2910320 + G 74 -6.8 -4.26344 | GCCGTTAAATTTGAA CGAG ATC CTCG TTTTGCTGGCGATGT Ava_2346 2909722 - 2910705 + | glycosyl transferase family protein Ava_2347 2911772 - 2910747 - | zinc-containing alcohol dehydrogenase superfamily protein TERM 2677 2911079 - 2911101 + g 70 -7.6 -3.6692 | opp_overlap 2911078 CTTCAATCACTACAT CCGCACCCCA GCC TTGGGTGAGG TCTTTTACCGTACCA Ava_2348 2912107 - 2913873 + | surface antigen variable number TERM 2678 2915407 - 2915425 + G 81 -4.4 -5.28778 | overlap 2915408 AATCTTGGATGGGGG AGCAGTGG CCA CCACAGCA TTTTTTGTAGGTAGT TERM 2679 2915408 - 2915424 + G 72 -7.9 -3.76182 | overlap 2915407 ATCTTGGATGGGGGA GCAGTGG CCA CCACAGC ATTTTTTGTAGGTAG TERM 2680 2915646 - 2915628 - g 81 -11 -3.39529 | overlap 2915632 CTAAGCTAACATTAA CCAACGGT GGA ACCGTCGG TGTCACAAATCAAGG TERM 2681 2916217 - 2916198 - g 79 -7.8 -4.39329 | overlap 2916199 ACCCGACACAAGAAA TCAGGAGC GATC GCTCCTGG TCAGACACCCGCGAC TERM 2682 2916216 - 2916199 - g 84 -11.3 -3.22874 | overlap 2916198 CCCGACACAAGAAAT CAGGAGC GATC GCTCCTG GTCAGACACCCGCGA Ava_2349 2913995 - 2916409 + | filamentous haemagglutinin-like TERM 2683 2916820 - 2916836 + G 74 -6.5 -4.57073 | opp_overlap 2916823, overlap 2916823 CAACTTATTCTTACT CAACCCC GCA GGGGTTA TTTTTGGGCAAAATG TERM 2684 2916823 - 2916833 + G 82 -8.2 -4.40561 | opp_overlap 2916823, overlap 2916820 CTTATTCTTACTCAA CCCC GCA GGGG TTATTTTTGGGCAAA Ava_2350 2916476 - 2918926 + | filamentous haemagglutinin-like Ava_2351 2918993 - 2921485 + | filamentous haemagglutinin-like Ava_2352 2921564 - 2924026 + | filamentous haemagglutinin-like Ava_2353 2924091 - 2926565 + | filamentous haemagglutinin-like TERM 2685 2926653 - 2926669 + T 73 -9.4 -2.76093 | opp_overlap 2926649, overlap 2926651 AAATTTCAATAGCTG GCTGGG AATTA CCCAGC TCCATTTCTTAGAGT Ava_2354 2927913 - 2926678 - | L,L-diaminopimelate aminotransferase TERM 2686 2926899 - 2926920 + g 75 -5.9 -4.58663 | gap 1, opp_overlap 2926899 TCACACCACCATATA CTGATAAGCC GGC GGCT-GTCAG TTTTTCGCGGATAAT Ava_2355 2928324 - 2929022 + | glycosyl transferase family protein Ava_2356 2931546 - 2929258 - | penicillin-binding protein 1C TERM 2687 2931547 - 2931560 + H 72 -8.1 -3.55622 | AGATATGAATTGCAT CAGGG AGTA CCCTG TTTAAGAAACTTGAC TERM 2688 2931780 - 2931733 - H 72 -9.2 -2.64803 | gap 1, opp_overlap 2931740, overlap 2931740 TGATTTTTAAACGCA GCGAAAAGTTCCTCGAAGCCGGG TTT CCCGGCGTAG-GAAACTTTTCAA GACAGAGGAGTGCGG TERM 2689 2931773 - 2931740 - H 81 -8.1 -4.22346 | gap 1, opp_overlap 2931740, overlap 2931733 TAAACGCAGCGAAAA GTTCCTCGAAGCCGGG TTT CCCGGCGTAG-GAAAC TTTTCAAGACAGAGG TERM 2690 2933315 - 2933304 - g 75 -3 -5.11063 | ATCAGGTAAGAAAAA TCAA TCAG TTGA TATCACTGTTCCTCT TERM 2691 2935489 - 2935477 - g 70 -5.5 -4.4296 | CAAGATATAGCAAAA CCCAA AGG CTGGG GTTACGGCGGTGGTT TERM 2692 2935825 - 2935791 - g 70 -7.8 -3.72027 | opp_overlap 2935802 ATCCGTCACTAATAA CACCGGAAATCGAGGG AAT CTCTCAATTAACGGTG AACTTAGCGGGACTG Ava_2357 2931934 - 2937654 + | Alpha-2-macroglobulin-like pyrE 2938303 - 2937683 - | orotate phosphoribosyltransferase TERM 2693 2938428 - 2938404 - H 81 -5.7 -5.1861 | opp_overlap 2938403 2938423, overlap 2938407 TTGAGGAGTAAAAAA GATGGGTATAA AAT TTAGACCCCTC AGTGGTTTTTTAGTG TERM 2694 2938423 - 2938433 + G 71 -2.4 -5.2112 | opp_overlap 2938407 2938404, overlap 2938403 GGTATAAAATTTAGA CCCC TCA GTGG TTTTTTAGTGCTATT Ava_2359 2938405 - 2938839 + | hypothetical protein TERM 2695 2938861 - 2938894 + F 70 -8.4 -3.36823 | opp_overlap 2938861 AGAGTTCATAACTAA TAGTTAAAAGTCAG CCCTTA TTGACTTTTGACTA TTGACTTTTAACAAA TERM 2696 2939650 - 2939664 + G 74 -4.2 -5.01546 | ATGCAGAACAAAGGC GCTGAT TCT ATCCGC TTTTTGTATAGCTTT Ava_2360 2939188 - 2939889 + | hypothetical protein TERM 2697 2939947 - 2939889 - f 90 -11.9 -3.61232 | gap 2, overlap 2939887 2939890 TCCTGTAGATAAATA GGGACTAGGGACTAGGAAGCAGGGGATAA ATT CCATCCCCAG-TCCCCAATCCCCAGTC-C CCAATCCCCAGTCCC TERM 2698 2939947 - 2939890 - f 100 -17.9 -2.76418 | gap 1, overlap 2939887 2939889 CCTGTAGATAAATAG GGACTAGGGACTAGGAAGCAGGGGATAA ATT CCATCCCCAG-TCCCCAATCCCCAGTCC CCAATCCCCAGTCCC Ava_2361 2940067 - 2941365 + | hypothetical protein Ava_2362 2942249 - 2941566 - | ExsB Ava_2363 2942982 - 2944046 + | oxidoreductase-like Ava_2364 2944423 - 2945040 + | hypothetical protein TERM 2699 2945033 - 2945050 + F 80 -2.1 -5.63517 | gap 1, opp_overlap 2945036, overlap 2945036 AGCGTAGAAACACCA GAA-TTTG AAG CAAAGTTC TTTTTTGTTTACAAC Ava_2365 2945263 - 2946414 + | hypothetical protein Ava_2366 2946420 - 2946908 + | hypothetical protein TERM 2700 2946953 - 2946976 + F 89 -11.2 -3.88641 | overlap 2946944 AACTACGGCTATCAG TCCTTAATAG TATT CTATTAAGGA TTATTAATATTTATT TERM 2701 2947336 - 2947358 + G 74 -7 -4.2828 | overlap 2947337 TGCTGTCGCCGATGC TGTCACATCC GTG GGATTTGACG TTTTGCTCAGTGAAG Ava_2367 2947121 - 2948557 + | phosphoglucomutase/phosphomannomutase TERM 2702 2949087 - 2949101 + G 100 -8.6 -5.47159 | GTGGTAGCGGTGGTT TCGGAT ATG ATCCGA TTTTTTATGTTACCG Ava_2368 2948648 - 2949238 + | putative deoxyribonucleotide triphosphate pyrophosphatase TERM 2703 2949274 - 2949241 - T 84 -7.6 -4.64334 | overlap 2949243 AAGTTCTGAATAAAA TATAGACTTACCAT AATGGG ATGGTAAGCCTAAA ATAGTCGAATAGAAA TERM 2704 2949272 - 2949243 - T 85 -10.2 -3.93367 | overlap 2949241 GTTCTGAATAAAATA TAGACTTACCAT AATGGG ATGGTAAGCCTA AAATAGTCGAATAGA Ava_2369 2949970 - 2949350 - | putative transposase Ava_2370 2950407 - 2950096 - | transposase Ava_2371 2951134 - 2950766 - | transposase TERM 2705 2951730 - 2951684 - H 100 -15.3 -4.08767 | opp_overlap 2951689 2951691 CTCAGGTTGTCAAAA GTCCACAGTCCAGAGTCCAAG CTAGC CTTTGACTCTGGACTCTTGAC TATGGACAGCCCTGA TERM 2706 2951689 - 2951725 + H 87 -12.4 -3.12351 | opp_overlap 2951684, overlap 2951691 GTTGTCAAAAGTCCA CAGTCCAGAGTCCAAG CTAGC CTTTGACTCTGGACTC TTGACTATGGACAGC TERM 2707 2951691 - 2951723 + H 100 -15 -3.12327 | opp_overlap 2951684, overlap 2951689 TGTCAAAAGTCCACA GTCCAGAGTCCAAG CTAGC CTTTGACTCTGGAC TCTTGACTATGGACA TERM 2708 2951824 - 2951788 - H 70 -8.9 -3.09327 | opp_overlap 2951785 2951783 TCACCTTAGCTAATA GGTAATTGGTTTTCA CTGTTGC CGATAACCAATTACC AAGTATCTGTAGGTT Ava_2372 2951943 - 2954135 + | exonuclease RecJ TERM 2709 2954119 - 2954164 + F 85 -11.4 -3.42861 | gap 1, overlap 2954120 AAGCATTGTCAATGC TGAGTGCTGAGTGCTGAGT ATAAATTTC AC-CATCACTCAGCACTCA TTAGTCTTATAGGTT Ava_2373 2954420 - 2954770 + | hypothetical protein Ava_2374 2955013 - 2954807 - | transcriptional regulator Ava_2375 2955573 - 2955244 - | hypothetical protein Ava_2376 2956395 - 2955892 - | pentapeptide repeat-containing protein TERM 2710 2956546 - 2956509 - R 84 -4.2 -5.4505 | CTTTCCAAGAAAAAA GAACTCGTTGCGAC TCATGCAATC GCGGCAACAAGTTC GGTCTACTGAGCGTG Ava_2377 2957002 - 2956811 - | hypothetical protein Ava_2378 2957137 - 2957553 + | hypothetical protein Ava_2379 2957574 - 2957876 + | hypothetical protein Ava_2380 2959175 - 2957937 - | molybdopterin molybdochelatase Ava_2381 2961458 - 2959305 - | peptidase C14, caspase catalytic subunit p20 TERM 2711 2959726 - 2959708 - G 71 -3 -4.98255 | opp_overlap 2959709 2959712, overlap 2959709 2959712 TGCCAAGGATAAAAA GCGATCGC AGT GCGATTGT TCTTTAATCCCAATA TERM 2712 2959709 - 2959725 + g 80 -8.7 -4.0031 | opp_overlap 2959709 2959708 2959712, overlap 2959712 GCCAAGGATAAAAAG CGATCGC AGT GCGATTG TTCTTTAATCCCAAT TERM 2713 2959712 - 2959722 + g 71 -6.8 -4.12603 | opp_overlap 2959709 2959708 2959712, overlap 2959709 AAGGATAAAAAGCGA TCGC AGT GCGA TTGTTCTTTAATCCC TERM 2714 2961230 - 2961242 + g 74 -4.1 -4.98255 | GAAAGCCAAACCGAT GGACT AAA AGTTC TTTTTGTAGTTCCAC TERM 2715 2961505 - 2961455 - G 82 -6.9 -4.83615 | overlap 2961456 2961458 2961459 GACGTTTCATAAAAA CCATCAGTCCTCAGCTC-GTCAGCT AAC AGCTTATAGGGCTGAGGACTGG-GG TGTAAACATAATTTG TERM 2716 2961502 - 2961459 - R 81 -11.8 -2.58667 | gap 1, overlap 2961458 2961455 2961456 TTTCATAAAAACCAT CAGTCCTCAGCTC-GTCAGCT AAC AGCTTATAGGGCTGAGGACTG GGGTGTAAACATAAT sat 2962789 - 2961611 - | sulfate adenylyltransferase TERM 2717 2962192 - 2962223 + g 82 -10.2 -3.5947 | GGTGAATGGGATTAC GGGTTTGAAAGCCG ACTA TGGTTTTCCAACCC TTGTCTCTAAACATT TERM 2718 2962408 - 2962420 + g 77 -6.3 -4.68424 | TGGCTTCACGGGTTT TATCG TAG CGATA TTTTTGCGTGAGTTG Ava_2383 2963352 - 2963594 + | hypothetical protein Ava_2384 2963762 - 2963998 + | hypothetical protein Ava_2385 2964166 - 2964402 + | hypothetical protein Ava_2386 2964565 - 2964807 + | hypothetical protein Ava_2387 2964902 - 2965177 + | hypothetical protein TERM 2719 2965449 - 2965426 - T 93 -14 -2.71731 | opp_overlap 2965426 TTCACTCCGTAATTA CTGGAACATC ATCT GATGTTCCAG TTTTTCTGATACAAC TERM 2720 2965426 - 2965449 + T 100 -14 -4.91109 | opp_overlap 2965426 TTCACTCCGTAATTA CTGGAACATC ATCT GATGTTCCAG TTTTTCTGATACAAC Ava_2388 2968772 - 2965749 - | glycosyl transferase family protein TERM 2721 2966867 - 2966879 + g 73 -2.7 -5.15167 | AGTGAGCAGTTCCTT CTAGT TTA ATTAG TTTTTCTTGATAATG TERM 2722 2967788 - 2967802 + g 74 -5 -4.82548 | TTTTATCATTAATGC TATTCC TGA GGAGTA TTTTGTGTATTTTTC Ava_2389 2970722 - 2968932 - | glycosyl transferase family protein TERM 2723 2969652 - 2969673 + g 86 -3.2 -5.73339 | GTCAAGTTTACCGAC TAAAAATA CATTAA TATTTTTA TTTTTTTCTAATTGT Ava_2390 2971957 - 2970734 - | DegT/DnrJ/EryC1/StrS aminotransferase Ava_2391 2972569 - 2972024 - | hypothetical protein Ava_2392 2973862 - 2972576 - | putative carbamoylphosphate synthase large subunit short form Ava_2394 2976868 - 2974646 - | hypothetical protein Ava_2395 2977455 - 2977721 + | hypothetical protein TERM 2724 2977889 - 2977912 + F 100 -10.4 -6.01187 | TTCAAAGTATAGTGA CTGGAACATC TTTG GATGTTTCAG TTTTTTTATTTAATT TERM 2725 2978112 - 2978167 + F 85 -9.2 -4.04174 | opp_overlap 2978124 2978127, overlap 2978113 2978124 AGAACAATAGGATTG AGTTCGTAGTAAGGACTTTAGTCCTT TTTC GAGAACTAAAGTTCTCACTACAAACC TTTCATTATCTACCA TERM 2726 2978113 - 2978166 + F 88 -12.7 -3.02023 | opp_overlap 2978124 2978127, overlap 2978112 2978124 GAACAATAGGATTGA GTTCGTAGTAAGGACTTTAGTCCTT TTTC GAGAACTAAAGTTCTCACTACAAAC CTTTCATTATCTACC TERM 2727 2978124 - 2978135 + F 76 -5.8 -4.57569 | opp_overlap 2978124 2978127, overlap 2978113 2978112 TTGAGTTCGTAGTAA GGAC TTTA GTCC TTTTTCGAGAACTAA TERM 2728 2978561 - 2978531 - f 76 -3.2 -5.31275 | opp_overlap 2978533, overlap 2978533 CTTCACGAGAAAAAA GACCCCTGACTTCT CAA AAAAGTTGGGGGTT TAAGTCTTTTGCTTC TERM 2729 2978533 - 2978559 + F 74 -8 -3.85786 | opp_overlap 2978531 2978533 TCACGAGAAAAAAGA CCCCTGACTTCT CAA AAAAGTTGGGGG TTTAAGTCTTTTGCT Ava_2396 2978861 - 2979169 + | hypothetical protein TERM 2730 2979274 - 2979299 + F 100 -14.9 -3.21099 | opp_overlap 2979266 2979274 ATTGAAATTCCTAAA TACTGGAGCAT AACA ATGCTCCAGTA TTCATCCTAAAAACA TERM 2731 2979299 - 2979274 - f 100 -14.9 -3.64236 | opp_overlap 2979274, overlap 2979266 ATTGAAATTCCTAAA TACTGGAGCAT AACA ATGCTCCAGTA TTCATCCTAAAAACA Ava_2397 2979352 - 2979600 + | hypothetical protein TERM 2732 2979689 - 2979713 + F 86 -9.9 -4.08216 | opp_overlap 2979711, overlap 2979690 GCGAACCCGCAGGGT ACCTCTCCCCG AAA CGGAGAGAGGC TTTTAAAACCCATAA TERM 2733 2979690 - 2979712 + F 93 -13.4 -3.04715 | opp_overlap 2979711, overlap 2979689 CGAACCCGCAGGGTA CCTCTCCCCG AAA CGGAGAGAGG CTTTTAAAACCCATA TERM 2734 2979745 - 2979731 - f 71 -5 -4.54477 | TTAAAACCCATAAAA TTCCCT ACA AGAGAA CGGGGAATTGGGGGG TERM 2735 2981919 - 2981901 - g 74 -10.2 -2.57132 | opp_overlap 2981916, overlap 2981900 TCTCTGGTGGACAAC GCCAACGC TTA GCGATGGC TAGAGCCATTGTTAC Ava_2398 2980031 - 2982181 + | bacteriocin-processing peptidase Ava_2399 2982297 - 2983700 + | secretion protein HlyD TERM 2736 2983828 - 2983788 - f 100 -28.7 -4.29176 | opp_overlap 2983796 ATACCCAACTTAAAA CTTAAGAACCCCGACTTCT TTG AGAAGTCGGGGTTCTTAAG CTGTCGATATCTACT TERM 2737 2983796 - 2983820 + F 100 -18.7 -3.66844 | opp_overlap 2983788 CTTAAAACTTAAGAA CCCCGACTTCT TTG AGAAGTCGGGG TTCTTAAGCTGTCGA Ava_2400 2984041 - 2984700 + | hypothetical protein Ava_2401 2984846 - 2985523 + | response regulator receiver domain-containing protein Ava_2402 2985628 - 2987487 + | sensor protein TERM 2738 2988044 - 2988032 - g 71 -4.7 -4.62069 | CGCGTAGCCGAAAAA GACCG AGC CGGAC GCTTTGATATAGAAA Ava_2403 2987510 - 2988547 + | ribonuclease Z Ava_2404 2990183 - 2988714 - | FHA domain-containing protein TERM 2739 2991268 - 2991254 - g 71 -8.6 -3.5394 | AAACGCGCTCCCAAA CTGGAA TGG TTCCAG AATGTGGAGTCGATG TERM 2740 2991751 - 2991766 + G 74 -4.7 -4.77896 | TTGGCACGCTCAATT GGCAA CAAACC TTGCC TTTTTGGGTTCCTTG psaA 2990693 - 2992951 + | photosystem I P700 chlorophyll a apoprotein A1 TERM 2741 2993026 - 2992971 - f 77 -10.6 -2.90511 | TAGTTATAAAGAGTA CTGAGTATTGAGTGCTGAGTACTG GGTAATAA CAGGACTTAGGACTCAAAACTCAG AACTCTGGAATCTGA TERM 2742 2993214 - 2993191 - g 74 -9.8 -3.09834 | opp_overlap 2993196, overlap 2993196 GATGGCATGACCGAA GAAAATCTTT ACCA AAAGATTTTC GCTACTCACTTCGGT psaB 2993074 - 2995299 + | photosystem I P700 chlorophyll a apoprotein A2 TERM 2743 2995354 - 2995333 - f 88 -5.7 -5.64006 | opp_overlap 2995333 AGGTAATTAAAAAAA TCCCCTGCC GCAA GGTGGGGGA TTTTTTTAACTGATA TERM 2744 2995333 - 2995354 + F 100 -10.1 -5.48825 | opp_overlap 2995333 AGGTAATTAAAAAAA TCCCCTGCC GCAA GGTGGGGGA TTTTTTTAACTGATA Ava_2407 2995441 - 2996220 + | hypothetical protein Ava_2408 2996495 - 2996845 + | hypothetical protein Ava_2409 2997006 - 2998028 + | hypothetical protein Ava_2410 2998956 - 2998069 - | peptidoglycan-binding LysM TERM 2745 2999122 - 2999108 - H 93 -12.8 -3.30441 | CACCAGTCGCTACAA CGGGGG GAA CCCCCG CAACGCGCTGGCTCA Ava_2411 2999314 - 3000519 + | peptidase S1 and S6, chymotrypsin/Hap Ava_2412 3000935 - 3000591 - | hypothetical protein Ava_2413 3001646 - 3001113 - | condensin subunit ScpB ispD 3002693 - 3002007 - | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase Ava_2415 3002882 - 3003841 + | glycosyl transferase family protein Ava_2416 3004446 - 3003973 - | hypothetical protein TERM 2746 3004146 - 3004196 + g 71 -6.9 -4.17657 | gap 2, overlap 3004146 GAATGCCTTCTTTGG C-GCTGAACTGGTGCGGTACA-AGC ATA GCGGTGTAACGCCCCAGTTCACCAG TTTTCCAATCTAGTA Ava_2417 3004911 - 3004615 - | Mo-dependent nitrogenase-like Ava_2418 3005345 - 3004908 - | hypothetical protein TERM 2747 3005478 - 3005492 + r 93 -12.8 -3.30441 | TGAGCCAGCGCGTTG CGGGGG TTC CCCCCG TTGTAGCGACTGGTG Ava_2419 3006064 - 3005690 - | response regulator receiver domain-containing protein Ava_2420 3008902 - 3006101 - | PAS/PAC sensor hybrid histidine kinase TERM 2748 3006955 - 3006941 - G 87 -6.4 -5.15969 | TGGCAAGGTAAAAAA GAAGGT GCT ACCCTC GCCCAAGGTGCTTTC TERM 2749 3008752 - 3008764 + g 75 -3.4 -5.09521 | opp_overlap 3008752 TGGCACTGTTTAAAA TTGC CTGTT GCAA TTTTTGATTTGTTGC Ava_2421 3011123 - 3009069 - | response regulator receiver modulated diguanylate cyclase TERM 2750 3011424 - 3011446 + r 83 -12 -2.62184 | opp_overlap 3011424 3011423, overlap 3011424 ATGGGGTTTTCAAAG CTTCTCTCCG TTC CGGGGAGAGG TACTCTACGAGAAGC TERM 2751 3011836 - 3011789 - R 93 -11.9 -4.07746 | gap 1, overlap 3011784 TTGCCAAAAATATAA CCTTTTTATTATTAATT-AGTC TCAAC AACTTAATTAATAATAAAAAGG CTGCTAGACAACGGT Ava_2422 3012260 - 3011859 - | hypothetical protein Ava_2423 3012869 - 3012423 - | molybdenum-pterin binding protein TERM 2752 3013296 - 3013282 - g 73 -2.8 -5.1523 | overlap 3013274 TTTAGAACAGAAAAA CCTG CTCGTTC CAGG TACACGAGGCATTGT Ava_2424 3012968 - 3013765 + | molybdenum ABC transporter periplasmic-binding protein Ava_2425 3014328 - 3014840 + | hypothetical protein Ava_2426 3014846 - 3015124 + | hypothetical protein Ava_2427 3015982 - 3015281 - | O-methyltransferase family protein TERM 2753 3016349 - 3016302 - H 100 -14.4 -4.2679 | opp_overlap 3016308 3016313, overlap 3016303 CAAGTGGGAGCAAAA GCACAATTAAACCTTGGGTTGA TCTA TCGATCCAAGGTTTAATTGTGT GGATGAAAATTTAAT TERM 2754 3016348 - 3016303 - H 100 -17.9 -3.15592 | opp_overlap 3016308 3016313, overlap 3016302 AAGTGGGAGCAAAAG CACAATTAAACCTTGGGTTGA TCTA TCGATCCAAGGTTTAATTGTG TGGATGAAAATTTAA TERM 2755 3016308 - 3016343 + H 100 -15 -3.51924 | opp_overlap 3016303 3016302, overlap 3016313 GGAGCAAAAGCACAA TTAAACCTTGGGTTGA TCTA TCGATCCAAGGTTTAA TTGTGTGGATGAAAA TERM 2756 3016313 - 3016338 + H 89 -10.5 -4.04576 | opp_overlap 3016303 3016302, overlap 3016308 AAAAGCACAATTAAA CCTTGGGTTGA TCTA TCGATCCAAGG TTTAATTGTGTGGAT TERM 2757 3016991 - 3017003 + G 72 -7.7 -3.86776 | opp_overlap 3016991 3016990 TTCTGCAACAAAAGG GGCAA TTG TTGCC TTTACTCGTTCCTTA Ava_2428 3016407 - 3017264 + | Short-chain dehydrogenase/reductase SDR Ava_2429 3017424 - 3017681 + | hypothetical protein Ava_2430 3019093 - 3017693 - | divalent cation transporter Ava_2431 3020741 - 3019212 - | mercuric reductase Ava_2432 3021286 - 3022557 + | hypothetical protein TERM 2758 3023593 - 3023609 + G 70 -7.3 -3.75015 | overlap 3023595 AGGTGTTTCAATTAG TACAGCA GGC TGCTGTG TTTGCTGCGCCTTAT Ava_2433 3022695 - 3023948 + | glycosyl transferase, group 1 Ava_2434 3023951 - 3025111 + | glycosyl transferase, group 1 Ava_2435 3025112 - 3026914 + | ABC transporter, transmembrane region Ava_2436 3026970 - 3027950 + | hypothetical protein Ava_2437 3028114 - 3029640 + | hypothetical protein Ava_2438 3030264 - 3029797 - | hypothetical protein Ava_2439 3031890 - 3030277 - | periplasmic sensor Signal transduction histidine kinase TERM 2759 3031961 - 3031925 - R 72 -8.2 -3.61774 | overlap 3031918 3031955 TATAATACTGCTAAA GTTTTGAATTTCGGCT CTAAC ATCCAAAATCCAAAAC CTTGCATTCAAAATT Ava_2440 3032784 - 3032116 - | two component transcriptional regulator TERM 2760 3032753 - 3032741 - G 71 -4.7 -4.63218 | opp_overlap 3032741, overlap 3032742 CCCTTCTCAATAAAA GCCGC TAT GCGGG GTTCATCTTCAGCTA TERM 2761 3033623 - 3033591 - R 76 -6.6 -4.42653 | gap 2, opp_overlap 3033589 3033592 3033598, overlap 3033598 ATGCCAGCGAGAAAA GGCATAACTAGGAAAA ATC TTTTCCTAG-TAT-CC TGTTTCTAATTTACT TERM 2762 3033618 - 3033598 - R 84 -11.3 -3.543 | opp_overlap 3033592 3033589 3033598, overlap 3033591 CGAGAAAAGGCATAA CTAGGAAAA ATC TTTTCCTAG TATCCTGTTTCTAAT TERM 2763 3033598 - 3033618 + r 79 -11.3 -3.00121 | opp_overlap 3033598 3033591, overlap 3033592 3033589 CGAGAAAAGGCATAA CTAGGAAAA ATC TTTTCCTAG TATCCTGTTTCTAAT Ava_2443 3034174 - 3033629 - | NADPH-dependent FMN reductase TERM 2764 3035222 - 3035234 + G 72 -7.7 -3.89501 | ACCATTTTTCAGCAT TTCCG GTT CGGAA TTTGTGGAAATGTTC TERM 2765 3035248 - 3035278 + G 78 -7.5 -4.41348 | AATTTGTGGAAATGT TCGTGGGTGTGGG TGCTT CTCGCGTCCGCGA TTTGTTTAAGAAAGC Ava_2444 3034506 - 3036407 + | FtsH peptidase TERM 2766 3036463 - 3036515 + T 100 -7.1 -5.83211 | overlap 3036464 3036467 CTGCTGAGACCGGGT GTAAGGGTGTAAGGGTGTAAGGGTT TCA ATCATTTATACCCCTATACCCTTAA TTTTTTGTTTTCATG TERM 2767 3036464 - 3036514 + T 89 -10.6 -4.07486 | overlap 3036463 3036467 TGCTGAGACCGGGTG TAAGGGTGTAAGGGTGTAAGGGTT TCA ATCATTTATACCCCTATACCCTTA ATTTTTTGTTTTCAT TERM 2768 3036467 - 3036511 + T 76 -7.9 -4.09805 | overlap 3036464 3036463 TGAGACCGGGTGTAA GGGTGTAAGGGTGTAAGGGTT TCA ATCATTTATACCCCTATACCC TTAATTTTTTGTTTT TERM 2769 3036609 - 3036590 - T 100 -8.6 -5.45652 | opp_overlap 3036589 ATTCGTAAGAAAAAA CCAGAGAA ATTA CTCTCTGG CTGATTACAGACACA Ava_2445 3037020 - 3036760 - | photosystem I reaction center subunit X Ava_2446 3037234 - 3038157 + | glutaminase Ava_2447 3038914 - 3038333 - | hypothetical protein TERM 2770 3039292 - 3039277 - g 71 -4.6 -4.61231 | overlap 3039279 TCACAGTTGCAAAAA CAGCGA GCGA TCGCAG TCATCCGCGCCCCGA Ava_2448 3039241 - 3039882 + | keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase Ava_2449 3040080 - 3040592 + | ErfK/YbiS/YcfS/YnhG TERM 2771 3040610 - 3040635 + T 91 -9.8 -4.4267 | opp_overlap 3040610 CATACAAACAAAAAA TCGTTACGGG CTATAA CCTGTAACGA TTTTAAGTTTTCAAC TERM 2772 3040635 - 3040610 - T 100 -8.3 -5.76237 | opp_overlap 3040610 CATACAAACAAAAAA TCGTTACGGGC TATA ACCTGTAACGA TTTTAAGTTTTCAAC Ava_2450 3041250 - 3040711 - | hypothetical protein TERM 2773 3041359 - 3041380 + H 73 -5.9 -4.52857 | TTTATATTCTTTGAA GGCTTTTAA ATAA TTAAATGCC TTTTCTCTAAAAACT TERM 2774 3041483 - 3041467 - H 70 -6.5 -4.14764 | GCTTAAATAATTAAA TGCCGCT TTA AGCGGAA GTTGCACGTTTGTGA Ava_2451 3041514 - 3043358 + | integrase catalytic subunit Ava_2452 3043364 - 3044272 + | hypothetical protein Ava_2453 3044933 - 3044391 - | hypothetical protein TERM 2775 3044627 - 3044638 + g 71 -2.2 -5.2189 | TTTGAGTATTCATTT GTCG TTTT TGAC TTTTTTGCTGATTAC Ava_2454 3045551 - 3045210 - | hypothetical protein TERM 2776 3045817 - 3045802 - H 79 -4.8 -5.10064 | opp_overlap 3045802 GCTAATATATAAAAA TTAGTA TTGT TACTAA TAGTTATTCAACCGA Ava_2455 3046232 - 3046747 + | ErfK/YbiS/YcfS/YnhG Ava_2456 3046830 - 3047333 + | hypothetical protein Ava_2457 3049716 - 3047395 - | hypothetical protein TERM 2777 3048884 - 3048874 - G 71 -8.2 -3.53012 | overlap 3048875 TTTTCCTGGGGGAAA GGCC TCC GGCC AGCACACAGGAGACC TERM 2778 3050194 - 3050174 - R 90 -9 -4.48449 | CCATTAAAATATAAA GGATGGAC TAATC GCCCATCC TTAAGCAAAAGAACT Ava_2458 3051636 - 3050245 - | amino acid-binding ACT TERM 2779 3051902 - 3051858 - H 75 -9.3 -3.23274 | overlap 3051853 GTTTGGACAAGGGAA GGGTATAGGGGCGTAAATGTT TAA AACCCTTACACCCCCTTACAC TCACTCTCAACAGAC Ava_2459 3052072 - 3053376 + | Tudor TERM 2780 3053584 - 3053547 - T 100 -12.1 -4.66833 | opp_overlap 3053548 3053555, overlap 3053548 3053555 CCTGAATTGCAAAAA GCAAAAAAGCGCCTCCC GTTA AGGAGACGCTTTCTTGT TGAATTAAGACTTCA TERM 2781 3053583 - 3053548 - T 100 -15.6 -3.39618 | opp_overlap 3053548 3053555, overlap 3053547 3053555 CTGAATTGCAAAAAG CAAAAAAGCGCCTCCC GTTA AGGAGACGCTTTCTTG TTGAATTAAGACTTC TERM 2782 3053548 - 3053583 + T 79 -10.5 -3.18199 | opp_overlap 3053547 3053548 3053555, overlap 3053555 CTGAATTGCAAAAAG CAAAAAAGCGCCTCC CGTTAA GGAGACGCTTTCTTG TTGAATTAAGACTTC TERM 2783 3053555 - 3053576 + T 79 -7.2 -4.4846 | opp_overlap 3053555 3053548 3053547, overlap 3053548 GCAAAAAGCAAAAAA GCGCCTCC CGTTAA GGAGACGC TTTCTTGTTGAATTA TERM 2784 3053576 - 3053555 - T 100 -10.1 -5.54079 | opp_overlap 3053548 3053555, overlap 3053548 3053547 GCAAAAAGCAAAAAA GCGCCTCCC GTTA AGGAGACGC TTTCTTGTTGAATTA Ava_2460 3054685 - 3053603 - | photosystem II reaction centre protein PsbA/D1 Ava_2461 3055135 - 3056187 + | isopentenyl pyrophosphate isomerase Ava_2462 3056252 - 3058081 + | peptidase S49, protease IV Ava_2463 3058786 - 3058190 - | hypothetical protein Ava_2464 3059294 - 3059088 - | hypothetical protein Ava_2465 3060105 - 3059464 - | MotA/TolQ/ExbB proton channel TERM 2785 3059965 - 3059977 + g 79 -7.7 -4.4078 | AAGTCTAAGAACTTC CCGTA CTA TACGG TTTTGCTTGCCCGAA Ava_2466 3062259 - 3060193 - | periplasmic sensor Signal transduction histidine kinase Ava_2467 3063144 - 3062266 - | phosphate transport system substrate-binding protein Ava_2468 3063680 - 3063399 - | hypothetical protein Ava_2469 3064745 - 3063708 - | binding-protein dependent transport system inner membrane protein Ava_2470 3065475 - 3064957 - | adenine phosphoribosyltransferase TERM 2786 3065219 - 3065229 + g 71 -3.2 -5.00616 | overlap 3065216 GAGTGAACTGCTGCG GGTA ACT TGCC TTTTTTGCGGACAGG Ava_2471 3065930 - 3066556 + | hypothetical protein Ava_2472 3066553 - 3068019 + | hypothetical protein TERM 2787 3068010 - 3067994 - T 70 -6.5 -4.13654 | overlap 3067997 GTGGCAAATTAGAAA TCACTCC TTG GGAGGGA TATAGGTAACTGGGG TERM 2788 3068064 - 3068041 - T 78 -6.8 -4.55016 | ACAAAAAAGTCAAAA GGTAAAAGTC AAAA GATTTTTACC AAGAAGCGGAGGGGT Ava_2473 3070403 - 3068133 - | glycosyl transferase/transpeptidase TERM 2789 3070556 - 3070577 + H 83 -5.9 -5.10461 | gap 1, opp_overlap 3070556, overlap 3070561 TGACTACTGACAAAA CTCCATC-AC CTC GTAGGTGGAG TTTTTATTAGCTCAG TERM 2790 3071051 - 3071067 + G 70 -5.2 -4.4261 | GGTACAGCTTTGACT TTAGCT CTCAC AGCTAA TTTTGCTGTTGCACA Ava_2474 3071009 - 3071668 + | hypothetical protein TERM 2791 3071743 - 3071708 - T 77 -8.4 -3.99315 | opp_overlap 3071708 3071714, overlap 3071714 ACTATAGTTAAATAA GAGAAAGGCTAGGA AGAATTGA CCCTAGCCTTTTTC TCTATCTAGACCTGT TERM 2792 3071708 - 3071743 + T 76 -9.9 -2.99649 | opp_overlap 3071708 3071714, overlap 3071714 ACTATAGTTAAATAA GAGAAAGGCTAGG AAGAATTGAC CCTAGCCTTTTTC TCTATCTAGACCTGT TERM 2793 3071714 - 3071737 + T 81 -5.3 -5.07275 | opp_overlap 3071714 3071708, overlap 3071708 GTTAAATAAGAGAAA GGCTAGG AAGAATTGAC CCTAGCC TTTTTCTCTATCTAG TERM 2794 3071737 - 3071714 - T 73 -6 -4.40333 | opp_overlap 3071708 3071714, overlap 3071708 GTTAAATAAGAGAAA GGCTAGGA AGAATTGA CCCTAGCC TTTTTCTCTATCTAG lspA 3072221 - 3071745 - | lipoprotein signal peptidase Ava_2476 3072927 - 3072337 - | BioY protein TERM 2795 3073436 - 3073454 + H 73 -3.2 -5.1675 | TATTTGCCAGTTTGT TTGTATAG TTC CTGTATAA TTTTTTGCTCAGTGC Ava_2477 3073605 - 3074786 + | periplasmic phosphate binding protein TERM 2796 3074814 - 3074799 - f 74 -4.8 -4.77896 | overlap 3074787 3074784 TAATCAATCCAAAAA TTGATT GACT AATCAA ATCACTTGGTCACCG Ava_2478 3074949 - 3075899 + | phosphate ABC transporter permease Ava_2479 3075920 - 3076801 + | phosphate ABC transporter permease Ava_2480 3076867 - 3077673 + | phosphate ABC transporter permease TERM 2797 3077696 - 3077728 + F 100 -13.7 -5.75945 | opp_overlap 3077687 3077701 TAATAACTTAATTTC TAAAATTAGGTATGC GCT GCATTCCTAATTTTA TTTTTTTTGGGGGGT TERM 2798 3077723 - 3077701 - f 85 -9.2 -4.1466 | opp_overlap 3077696, overlap 3077687 ACTTAATTTCTAAAA TTAGGTATGC GCT GCATTCCTAA TTTTATTTTTTTTGG TERM 2799 3077958 - 3077974 + F 70 -6.5 -4.09739 | AATGATGGCAACGTT GCTGATG AAG CAGCAGC TTTTCAACAGCTTAA Ava_2481 3078137 - 3079102 + | taurine catabolism dioxygenase TauD/TfdA TERM 2800 3079152 - 3079107 - T 70 -5.5 -4.36914 | gap 1, opp_overlap 3079110, overlap 3079108 3079109 TGCTTTCCTAGAAAA CTTGAGTGCTGAGTAAAAAAGC CCA GCTACTT-ACTCAGCACTCTTA ATTTAAATTATGTTT TERM 2801 3079150 - 3079109 - T 75 -10.3 -2.52946 | gap 1, opp_overlap 3079110, overlap 3079108 3079107 CTTTCCTAGAAAACT TGAGTGCTGAGTAAAAAAGC CCA GCTACTT-ACTCAGCACTCT TAATTTAAATTATGT TERM 2802 3079110 - 3079149 + T 87 -11.6 -3.58177 | gap 1, opp_overlap 3079109 3079108 3079107 TTTCCTAGAAAACTT GAGTGCTGAGTAAAAAAGC CCA GCTACTT-ACTCAGCACTC TTAATTTAAATTATG Ava_2482 3080466 - 3079150 - | tRNA (uracil-5-)-methyltransferase Gid Ava_2483 3081275 - 3080637 - | glutathione S-transferase-like protein Ava_2484 3081779 - 3081339 - | hypothetical protein TERM 2803 3081829 - 3081852 + r 77 -9.8 -3.17714 | opp_overlap 3081829, overlap 3081833 TTTCTGCACAAAAAA TAAACTATCT TTGA AGATAGTTTA TTCATGAAACTTTAA TERM 2804 3081852 - 3081829 - R 100 -9.8 -5.24129 | opp_overlap 3081829 3081833 TTTCTGCACAAAAAA TAAACTATCT TTGA AGATAGTTTA TTCATGAAACTTTAA Ava_2485 3082052 - 3081864 - | 4-oxalocrotonate tautomerase Ava_2486 3082642 - 3082253 - | transposase IS4 Ava_2487 3083052 - 3082663 - | transposase Ava_2488 3083757 - 3083152 - | TetR family transcriptional regulator Ava_2489 3085053 - 3083899 - | Iron-containing alcohol dehydrogenase Ava_2490 3085406 - 3085684 + | hypothetical protein Ava_2491 3086953 - 3085772 - | Crp/FNR family transcriptional regulator TERM 2805 3086880 - 3086905 + g 88 -9.9 -4.16814 | gap 1, opp_overlap 3086876 ATCCAAGGCAACACG CTAGCAG-TTTG GTA CAAATCTGCTAG TTGTTTATGTAATGC Ava_2492 3088010 - 3089089 + | fructose-1,6-bisphosphate aldolase TERM 2806 3089157 - 3089180 + F 100 -8.1 -5.252 | opp_overlap 3089157 ATTGATATAAATAAA CCGGGAAAC TTCAGT GTTACCCGG TTTTTTGTGGAAATG TERM 2807 3089180 - 3089157 - f 88 -8.1 -4.63044 | opp_overlap 3089157 ATTGATATAAATAAA CCGGGAAAC TTCAGT GTTACCCGG TTTTTTGTGGAAATG Ava_2493 3089335 - 3089565 + | hypothetical protein Ava_2494 3089562 - 3089930 + | hypothetical protein TERM 2808 3090030 - 3090014 - g 75 -5.1 -4.76193 | AACGAGAATATAAAA CCTACGC CAT ACGTAAG AAGACCAAATCATAT Ava_2495 3089996 - 3090751 + | hypothetical protein Ava_2496 3090920 - 3091120 + | hypothetical protein Ava_2497 3091117 - 3091380 + | plasmid stabilization system protein Ava_2498 3091753 - 3091535 - | hypothetical protein Ava_2499 3094132 - 3091796 - | WD-40 repeat-containing protein Ava_2500 3094630 - 3095709 + | Rieske (2Fe-2S) region TERM 2809 3095802 - 3095784 - f 100 -13.2 -4.87665 | opp_overlap 3095782 3095781 TTGCACTCATAAAAA GAAGTGGC AAA GCCACTTC AGATTTCCCAGGTAG Ava_2501 3096027 - 3096191 + | rubredoxin-type Fe(Cys)4 protein TERM 2810 3096446 - 3096463 + G 72 -7.7 -3.87815 | opp_overlap 3096433 3096446 AAGCCAGTCGTCAAA CACTGGC GAAA GTCAGTG TTTCTGGCGGTGGGC Ava_2502 3096328 - 3097569 + | fumarate reductase/succinate dehydrogenase flavoprotein-like TERM 2811 3097634 - 3097678 + F 100 -8.2 -5.46276 | gap 1, opp_overlap 3097633 3097634 3097637, overlap 3097635 CTACCTAACGACAAG CTAGAAGGAGAAAG-GCTAAA AATC TTTAGTATTTTCTCCTTCTAC TTTTTTATCTATATT TERM 2812 3097635 - 3097677 + F 91 -11.7 -3.85325 | gap 1, opp_overlap 3097633 3097634 3097637, overlap 3097634 TACCTAACGACAAGC TAGAAGGAGAAAG-GCTAAA AATC TTTAGTATTTTCTCCTTCTA CTTTTTTATCTATAT TERM 2813 3098928 - 3098941 + G 71 -2.3 -5.14965 | TTTTGTATATAGTTA GCAAC CAGC GTAGC TTTTTTAATGAAGAT Ava_2503 3097985 - 3099037 + | hypothetical protein TERM 2814 3099048 - 3099100 + T 89 -5.8 -5.26907 | opp_overlap 3099056 3099058, overlap 3099056 3099058 CCTAGTAGCAAACTC TGAATAAACATGAGTCTCCAAC GAAGGCGAA GTTGGAGACTCATCTTACTTTA TTTTGTTTTGTATTC TERM 2815 3099092 - 3099056 - T 86 -9.6 -4.19371 | opp_overlap 3099056 3099048 3099058, overlap 3099058 CAAACTCTGAATAAA CATGAGTCTCCAAC GAAGGCGAA GTTGGAGACTCATC TTACTTTATTTTGTT TERM 2816 3099056 - 3099092 + T 83 -9.6 -3.85719 | opp_overlap 3099056 3099058, overlap 3099048 3099058 CAAACTCTGAATAAA CATGAGTCTCCAAC GAAGGCGAA GTTGGAGACTCATC TTACTTTATTTTGTT TERM 2817 3099058 - 3099090 + T 90 -12.2 -3.47652 | opp_overlap 3099056 3099058, overlap 3099056 3099048 AACTCTGAATAAACA TGAGTCTCCAAC GAAGGCGAA GTTGGAGACTCA TCTTACTTTATTTTG TERM 2818 3099090 - 3099058 - T 93 -12.2 -3.68725 | opp_overlap 3099058 3099056 3099048, overlap 3099056 AACTCTGAATAAACA TGAGTCTCCAAC GAAGGCGAA GTTGGAGACTCA TCTTACTTTATTTTG Ava_2504 3100030 - 3099158 - | putative 6-pyruvoyl tetrahydropterin synthase Ava_2505 3100595 - 3100152 - | PilT protein-like Ava_2506 3100843 - 3100598 - | hypothetical protein Ava_2507 3101605 - 3100898 - | heat shock protein DnaJ-like Ava_2508 3102583 - 3101621 - | cysteine synthase TERM 2819 3101979 - 3102001 + g 73 -8.4 -3.71527 | overlap 3101981 GGCTCAACTGCGATC GCCTGAAAAC TTG GTTTACGGGC TTTCAGTACTTCCGC Ava_2509 3103144 - 3102707 - | BadM/Rrf2 family transcriptional regulator TERM 2820 3103265 - 3103282 + r 95 -12.7 -3.85509 | opp_overlap 3103265 AAAGACAGCAAAAAA CCCCGCT ACTG AGCGGGG TTTCAATTATATTCA TERM 2821 3103282 - 3103265 - R 100 -12.7 -5.28755 | opp_overlap 3103265 AAAGACAGCAAAAAA CCCCGCT ACTG AGCGGGG TTTCAATTATATTCA Ava_2510 3105045 - 3103321 - | S-layer region-like TERM 2822 3104910 - 3104924 + g 75 -8.6 -3.79043 | GTTGTTGAGCTAGTT CAGTAG GTA CTACTG TTTCGGTTACTGATA phhB 3105693 - 3105412 - | pterin-4-alpha-carbinolamine dehydratase TERM 2823 3105932 - 3105886 - R 100 -13.3 -5.28176 | gap 1, opp_overlap 3105889, overlap 3105889 3105890 CGTACCCATAAAAAA CTA-TCCGCTCTGATTTAGATT GGAT AATCTAAGTCAGAGCGGTCTAG CGGGTCTTCAGGTTG TERM 2824 3105928 - 3105889 - R 100 -15.2 -3.45403 | opp_overlap 3105889, overlap 3105886 3105890 ACCCATAAAAAACTA TCCGCTCTGATTTAGATT GGAT AATCTAAGTCAGAGCGGT CTAGCGGGTCTTCAG TERM 2825 3105927 - 3105890 - R 100 -18.7 -2.66157 | opp_overlap 3105889, overlap 3105889 3105886 CCCATAAAAAACTAT CCGCTCTGATTTAGATT GGAT AATCTAAGTCAGAGCGG TCTAGCGGGTCTTCA TERM 2826 3106020 - 3106000 - R 70 -9.1 -3.05463 | opp_overlap 3105978 3105977 AGCTTTTGGAGCTAA CTTAGTCTC GAA AAGACTAAG GCTAACTTTTAGAGA TERM 2827 3106263 - 3106244 - R 100 -9.2 -5.69262 | opp_overlap 3106244 CCACAAAAAGAAAAA CCCCCGCC AAAA AGCGGAGG TTTGAACACAATGGC Ava_2512 3107357 - 3106302 - | photosystem II reaction centre protein PsbD/D2 TERM 2828 3107461 - 3107435 - H 79 -7.4 -4.40003 | opp_overlap 3107440 3107443 TCTTACAAACAGAAA GTTAACCAGATT GTC AATCTAGTTTAC AAATTTTTACCGTCT Ava_2513 3107758 - 3108030 + | hypothetical protein TERM 2829 3108355 - 3108336 - g 74 -4.2 -5.06414 | TTGGTGGAAGAAAAA CTGCCAAC ATCG GCTGTCAG AGCGAGAGTAGAAGA Ava_2514 3108045 - 3108722 + | ABC transporter-like TERM 2830 3108841 - 3108858 + F 100 -12.7 -4.62803 | opp_overlap 3108836 3108835 TTTTGACAACTGCAA CGCGCCA TTAA TGGCGCG TTTGTTATTATTTGG Ava_2515 3109009 - 3109557 + | hypothetical protein Ava_2516 3110452 - 3110775 + | hypothetical protein TERM 2831 3111046 - 3111013 - T 100 -14.1 -4.56597 | opp_overlap 3111013 3111016 TTTGTCTTGTAAAAA CAATGGGTAATTGTT CAAT ATCAATTACCCATTG TTATATCAAATATTC TERM 2832 3111013 - 3111046 + T 100 -14.1 -3.52079 | opp_overlap 3111013, overlap 3111016 TTTGTCTTGTAAAAA CAATGGGTAATTGTT CAAT ATCAATTACCCATTG TTATATCAAATATTC TERM 2833 3111016 - 3111043 + T 85 -10 -3.88946 | opp_overlap 3111013, overlap 3111013 GTCTTGTAAAAACAA TGGGTAATTGTT CAAT ATCAATTACCCA TTGTTATATCAAATA gyrB 3113012 - 3111075 - | DNA gyrase subunit B TERM 2834 3112058 - 3112071 + g 75 -3.1 -5.08483 | GGACGTGTTCACCAC TGAGG TTTG CTTCA TTTTCTTTAATTTTA TERM 2835 3112577 - 3112598 + g 79 -3.1 -5.36441 | opp_overlap 3112576, overlap 3112576 TAACAGGGATACCAC GTTCATA ACGTTGAA TATGAAC TTTTTTATCTCGCCA TERM 2836 3113100 - 3113090 - H 78 -6.8 -4.6821 | opp_overlap 3113090 3113077 3113076 AATTCTAACACAAAA GCCT TAA AGGC GACTGTAGGGCATTT miaA 3113389 - 3114273 + | tRNA delta(2)-isopentenylpyrophosphate transferase Ava_2519 3114398 - 3115699 + | Serine/threonine protein kinase Ava_2520 3115941 - 3117419 + | glycolate oxidase subunit GlcD TERM 2837 3117456 - 3117473 + F 100 -9.9 -5.40474 | opp_overlap 3117459, overlap 3117469 3117470 AATATTTATTTGTAG TAAGGGC TAAA GCCCTTA TTTTTTTAAAGAACT Ava_2521 3117574 - 3118236 + | hypothetical protein TERM 2838 3118339 - 3118369 + F 100 -14.2 -4.41047 | opp_overlap 3118333 3118341 3118343, overlap 3118341 AAATCAAGAGGATCA GATATCCGACTTCT TTA AGAAGTCGGATATA TTTTGGTTCACGAAT TERM 2839 3118341 - 3118367 + F 100 -16.8 -3.8125 | opp_overlap 3118333 3118341 3118343, overlap 3118339 ATCAAGAGGATCAGA TATCCGACTTCT TTA AGAAGTCGGATA TATTTTGGTTCACGA TERM 2840 3118367 - 3118341 - f 100 -16.8 -2.867 | opp_overlap 3118341 3118339, overlap 3118333 3118343 ATCAAGAGGATCAGA TATCCGACTTCT TTA AGAAGTCGGATA TATTTTGGTTCACGA TERM 2841 3118365 - 3118343 - f 100 -15 -2.97902 | opp_overlap 3118341 3118339, overlap 3118333 3118341 CAAGAGGATCAGATA TCCGACTTCT TTA AGAAGTCGGA TATATTTTGGTTCAC Ava_2522 3118508 - 3119770 + | hypothetical protein Ava_2523 3119809 - 3120375 + | hypothetical protein TERM 2842 3121072 - 3121088 + G 79 -10.9 -2.9348 | opp_overlap 3121068, overlap 3121068 ATGCGGCTAAAGTGC GTCAGCA CTA TGCTGAC TGTGTACGCTTTGGC TERM 2843 3121892 - 3121879 - g 75 -2.3 -5.40625 | overlap 3121880 ATATTACAGAAAAAA CCCGT GATT ACGGC GAGGAAACGCAAGTT Ava_2524 3120786 - 3123041 + | multi-sensor Signal transduction histidine kinase Ava_2525 3124132 - 3123263 - | hypothetical protein Ava_2526 3125113 - 3124358 - | hypothetical protein Ava_2527 3125432 - 3126862 + | 6-phosphogluconate dehydrogenase TERM 2844 3126899 - 3126921 + T 100 -11.4 -5.27923 | opp_overlap 3126896 GAACTTAATTTATTA GTGGCTCTAA ATA TTAGAGTCAC TTTTTTATCAAGTTA Ava_2528 3128105 - 3126975 - | Serine/threonine protein kinase Ava_2529 3128266 - 3129297 + | hypothetical protein Ava_2530 3131655 - 3129325 - | filamentous haemagglutinin-like TERM 2845 3131182 - 3131209 + g 74 -10 -3.17195 | opp_overlap 3131182, overlap 3131180 3131179 3131184 AATTGATAAAGGAGA TGGTACAAGGGA TAAC TCTCTTGTACTA TAATTTCTTCTATCA TERM 2846 3131184 - 3131207 + g 77 -10.4 -3.1355 | opp_overlap 3131182, overlap 3131182 3131180 3131179 TTGATAAAGGAGATG GTACAAGGGA TAAC TCTCTTGTAC TATAATTTCTTCTAT Ava_2531 3132251 - 3132006 - | hypothetical protein Ava_2532 3133220 - 3132393 - | binding-protein dependent transport system inner membrane protein TERM 2847 3133050 - 3133024 - G 71 -9.4 -2.9756 | opp_overlap 3133024 3133045, overlap 3133011 3133023 AATGCCAACAAGAAC TTACCTCGTTGC CAA GCATCGTGGTAA TTAGCTAATGACCAA TERM 2848 3133024 - 3133050 + g 72 -9.4 -3.09516 | opp_overlap 3133011 3133023 3133024, overlap 3133045 AATGCCAACAAGAAC TTACCTCGTTGC CAA GCATCGTGGTAA TTAGCTAATGACCAA TERM 2849 3133136 - 3133124 - G 77 -4.8 -4.94222 | AAGAAGTGAGAAAAA CCAC AAACA GTGG CAACAGCACAATCAA Ava_2533 3133398 - 3134093 + | hypothetical protein TERM 2850 3134398 - 3134386 - g 75 -9.1 -3.65046 | GCGGTAGCTCAAGAA CTGGG ATA CCCAG AATACGCCGACCAAG Ava_2534 3134326 - 3135345 + | hypothetical protein Ava_2535 3135469 - 3136449 + | acetyl-CoA carboxylase carboxyltransferase subunit alpha TERM 2851 3136608 - 3136641 + F 70 -3.2 -4.9792 | overlap 3136616 GCTAATTAACTGTAG TAACATGGGCTAGT CTCTAA ACTAGCGTTTGTTA TTTTTGTGTAAACTA TERM 2852 3136888 - 3136869 - g 70 -7.8 -3.60971 | AGTGGAATTGGCAAA GCAACGGC ATTA GCCTTTGC AAAAGCAGGAATAGA Ava_2536 3136809 - 3137534 + | short chain dehydrogenase TERM 2853 3137516 - 3137531 + F 77 -10.4 -2.82082 | opp_overlap 3137506, overlap 3137518 ATTGACGCTCATGCC CAGCGC AGGT GCGCTG TAATTCGTAATTCGT folE 3137698 - 3138405 + | GTP cyclohydrolase I TERM 2854 3138409 - 3138466 + T 71 -4.9 -4.57569 | opp_overlap 3138410, overlap 3138410 3138412 3138426 TCATTCTTTTAGGGA ATGGGGAGTGGGGAATGGGGAAT ATCCCTTCTTCC ACTCCCTAATTCCTACTCCCCAA TTTTTCAAAAAGTAG TERM 2855 3138410 - 3138465 + T 70 -8.4 -3.3422 | opp_overlap 3138410, overlap 3138409 3138412 3138426 CATTCTTTTAGGGAA TGGGGAGTGGGGAATGGGGAAT ATCCCTTCTTCC ACTCCCTAATTCCTACTCCCCA ATTTTTCAAAAAGTA TERM 2856 3138412 - 3138449 + T 77 -10.5 -2.80016 | opp_overlap 3138410, overlap 3138410 3138409 3138426 TTCTTTTAGGGAATG GGGAGTGGGGAATGGGG AATA TCCCTTCTTCCACTCCC TAATTCCTACTCCCC Ava_2538 3139081 - 3138449 - | N-(5'-phosphoribosyl)anthranilate isomerase TERM 2857 3138900 - 3138915 + g 76 -6.8 -4.49781 | overlap 3138902 TCCGCAATACTGCTA TTGGCG AAAA CGCCGA TTTTATCAATATTTT TERM 2858 3138929 - 3138957 + g 88 -11.1 -3.88787 | GATTTTATCAATATT TTTGGGTAGTGGT GCT ACTGCTGCCCAAA TTTGTGCGGCTGTAA Ava_2539 3139210 - 3139464 + | hypothetical protein Ava_2540 3139658 - 3139990 + | photosystem I reaction center subunit X-like protein Ava_2541 3140417 - 3142195 + | alkaline phosphatase-like TERM 2859 3142237 - 3142280 + T 100 -14 -2.90392 | gap 1, overlap 3142244 TAAGTATCTGTAGGG TG-GGCAATGCCCACCAAAAC CCG GATATGGTGGGCATTGCTACA TATAATTCACCAATC TERM 2860 3142244 - 3142272 + T 84 -11.7 -3.21126 | overlap 3142237 CTGTAGGGTGGGCAA TGCCCACCAAAAC CCG GATATGGTGGGCA TTGCTACATATAATT Ava_2542 3142843 - 3142307 - | hypothetical protein TERM 2861 3142517 - 3142506 - G 73 -7.2 -4.10657 | TTAGATGTGGCAAAA CCGC GATC GCGG TACAAGGTGTTTCCT TERM 2862 3142657 - 3142627 - G 100 -6.2 -5.60864 | opp_overlap 3142627 CACAGATCAAAAAAA CTGACTCAGCTA ATTCATG TATCTGAGCCAG TTCTTGTAATTCATC TERM 2863 3143918 - 3143894 - g 74 -9.2 -3.38088 | AACCCAGGTAAGTAA TGCCCGCACC CAAGT GGAACGGGCA AGACTCGAAGTAGTA Ava_2543 3143388 - 3144803 + | secretion protein HlyD TERM 2864 3146375 - 3146388 + G 77 -4.5 -5.00339 | overlap 3146376 CGAGTACAAACTTAG TGGCA GTGT TGCCG TTTTTACTTATTGGT Ava_2544 3144922 - 3148185 + | acriflavin resistance protein TERM 2865 3148231 - 3148203 - f 85 -12.6 -2.72839 | gap 1, opp_overlap 3148199 AATTAGCTGTAATCA CGTTGACGGTTGA CTGT TCA-CCGTCAACG AAACTCATATATGAT Ava_2545 3148431 - 3149690 + | ATPase-like TERM 2866 3149670 - 3149710 + F 77 -10 -3.22298 | gap 1, opp_overlap 3149671 3149672, overlap 3149672 GGGGCAATTGAAAGA AGCCTTTCTCATAGTGAAT AATT ATTC-CTATGAGAAAGGTA TTGCTCATCGATACA TERM 2867 3149709 - 3149671 - f 89 -11.3 -4.0098 | gap 1, opp_overlap 3149670 3149672, overlap 3149672 GGGCAATTGAAAGAA GCCTTTCTCATAGTGAAT AATT ATTC-CTATGAGAAAGGT ATTGCTCATCGATAC TERM 2868 3149708 - 3149672 - f 100 -14.8 -3.00106 | gap 1, opp_overlap 3149672 3149670, overlap 3149671 GGCAATTGAAAGAAG CCTTTCTCATAGTGAAT AATT ATTC-CTATGAGAAAGG TATTGCTCATCGATA TERM 2869 3149672 - 3149708 + F 100 -14.8 -3.17527 | gap 1, opp_overlap 3149671 3149672, overlap 3149670 GGCAATTGAAAGAAG CCTTTCTCATAGTGAAT AATT ATTC-CTATGAGAAAGG TATTGCTCATCGATA Ava_2546 3149699 - 3150217 + | hypothetical protein Ava_2547 3151267 - 3150263 - | 3-beta hydroxysteroid dehydrogenase/isomerase TERM 2870 3151060 - 3151038 - G 76 -2.6 -5.41143 | opp_overlap 3151045, overlap 3151040 TACTCCCGAAAAAAA GCTGCCGTGT GAA ACACCACATC TACTCCCTTTAATGC TERM 2871 3151934 - 3151920 - g 72 -6.4 -4.36914 | GCGCGGGTGACAAAA GCCCTT TAT AAAGGC ATGAGCTATTTAATC Ava_2548 3151356 - 3152066 + | TetR family transcriptional regulator rplS 3152228 - 3152620 + | 50S ribosomal protein L19 TERM 2872 3152658 - 3152671 + F 72 -9.5 -2.75064 | opp_overlap 3152655, overlap 3152656 AATCTCAGTGAATCG GCGGC ATCT GCCGC TAGTTAACTCGACAA TERM 2873 3152742 - 3152730 - f 91 -6.3 -5.72207 | GTTAAACTAAAAAAA GTTTG ACA CAAAC TAAAATCAAGCCAGC TERM 2874 3152887 - 3152873 - f 73 -8.6 -3.32268 | opp_overlap 3152882, overlap 3152882 GAACCAGTGGTACAA CTGCTA AGA TAGCAG GAAGTGCTATTGATT secE 3153032 - 3153253 + | preprotein translocase subunit SecE nusG 3153253 - 3153885 + | transcription antitermination protein NusG rplK 3153893 - 3154318 + | 50S ribosomal protein L11 TERM 2875 3154566 - 3154540 - g 74 -9.4 -3.24232 | overlap 3154538 GCCTGTTGAAAGAGA CAGCCACAGCAA AAT TTGCCGAAGCTG CGGAAGCGCATATCC rplA 3154443 - 3155159 + | 50S ribosomal protein L1 TERM 2876 3155350 - 3155378 + F 100 -14.7 -3.81 | opp_overlap 3155354, overlap 3155354 TCAGAGTCTTGAGAC TAAACCCCGGCTG AGA TAGTCGGGGTTTA TTGTTATACCCTGGT TERM 2877 3155374 - 3155354 - f 77 -8.2 -3.83205 | opp_overlap 3155354 3155350 AGTCTTGAGACTAAA CCCCGGCT GAGAT AGTCGGGG TTTATTGTTATACCC TERM 2878 3155354 - 3155374 + F 95 -11.1 -4.51812 | opp_overlap 3155354, overlap 3155350 AGTCTTGAGACTAAA CCCCGGCTG AGA TAGTCGGGG TTTATTGTTATACCC rplJ 3155449 - 3155994 + | 50S ribosomal protein L10 rplL 3156095 - 3156481 + | 50S ribosomal protein L7/L12 TERM 2879 3156546 - 3156529 - T 100 -7 -5.67063 | opp_overlap 3156529 CTTACTATAAAAAAA GGAGTC TAATTG GACTCC TTTTTTGTTGGCAAT TERM 2880 3156529 - 3156546 + T 100 -7.7 -5.45652 | opp_overlap 3156529 CTTACTATAAAAAAA GGAGTCT AATT GGACTCC TTTTTTGTTGGCAAT TERM 2881 3156612 - 3156601 - T 89 -5.8 -5.28481 | opp_overlap 3156604 CACTGAACCAAAAAA CCCT TCTG AGGG TGGTCAACAGTCAAC Ava_2556 3157840 - 3156770 - | hypothetical protein Ava_2557 3159400 - 3157904 - | secretion protein HlyD Ava_2558 3160373 - 3159498 - | 3-beta hydroxysteroid dehydrogenase/isomerase TERM 2882 3159713 - 3159686 - G 70 -9.3 -2.8007 | opp_overlap 3159686, overlap 3159683 3159690 3159693 GCAATCCATCAATTA CCAATAATGGT GAGTTA ACCACTATTGG TTCTTTCTTAAAGAT TERM 2883 3159686 - 3159713 + g 73 -7.1 -4.20768 | opp_overlap 3159683 3159686 3159690 3159693 GCAATCCATCAATTA CCAATAATGGT GAGTTA ACCACTATTGG TTCTTTCTTAAAGAT TERM 2884 3160089 - 3160073 - G 84 -5.1 -5.31519 | ATACGGAAATAAAAA CAAAGTG CTG CACTCCG TTAGCTTTCGCTTGG TERM 2885 3160150 - 3160174 + g 84 -11.5 -3.07192 | AGGGTGAGTGCATCG TTATCAGAGCC GTG GGCGCTGATAA TATATTGAACACCTT Ava_2559 3161360 - 3160578 - | exodeoxyribonuclease III TERM 2886 3162274 - 3162262 - g 95 -7.7 -5.04175 | opp_overlap 3162262, overlap 3162254 TCAACTATATAAAAA CCGTT TAT AACGG TATTGAGCCAAAAGA Ava_2561 3161811 - 3162878 + | glycosyl transferase, group 1 Ava_2561a 3162930 - 3163121 + | hypothetical protein Ava_2562 3164788 - 3163475 - | response regulator receiver Signal transduction histidine kinase TERM 2887 3164274 - 3164289 + g 95 -7.6 -5.22039 | opp_overlap 3164273 ATACCAGCAACAAGT TGTCCA AGGG TGGACA TTTTTTCACTTTGGA Ava_2563 3167592 - 3164785 - | periplasmic sensor hybrid histidine kinase TERM 2888 3165842 - 3165852 + g 71 -4.6 -4.72986 | AAATTGATCAACACT TGCC TTA GGCG TTTTTCATCCACCTC TERM 2889 3167634 - 3167685 + r 80 -10.3 -3.45366 | TTGATGAGCATTGGG GATTAGGGATTGGGTTTGAGGAA TAAATT TTTCTGGTTCCCAATCCCTAATC TTGATTAATTAGCAG Ava_2564 3168742 - 3167690 - | hypothetical protein Ava_2565 3171486 - 3168931 - | TPR repeat-containing protein TERM 2890 3169322 - 3169310 - G 91 -6.3 -5.5074 | CAAGTCAATAAAAAA GTATC TTC GATAC GGGAGCTGAACTGTC TERM 2891 3170130 - 3170113 - G 71 -4.1 -4.86731 | overlap 3170114 TTCGCGGAAAGAAAA TTGAACC TCCG GGTTCAC TGCAACCATATCTCC Ava_2566 3172284 - 3172499 + | hypothetical protein TERM 2892 3172528 - 3172542 + F 70 -6.4 -4.1711 | GGAACCAATTAGTTA GTTTGC ACA GCAGAC TTTGTTGAGAATAGT TERM 2893 3172833 - 3172849 + F 71 -9.5 -2.53213 | GTTCATGAATTGCAC CATTCTG CCT CAGAATG TAAGTTCAAAAATTA TERM 2894 3172978 - 3172953 - f 70 -2.5 -5.16572 | opp_overlap 3172953, overlap 3172954 ATTCAATTGAAAAAA TTTGCTGGCTC ATGA GAACTAGCAAC TTGGATTAGCGTTTC TERM 2895 3173288 - 3173298 + G 74 -6.8 -4.25104 | ATTGCCCATGCCATT TGGG ACC CCCA TTTTGGTGAACCAGC TERM 2896 3174252 - 3174235 - g 78 -5.6 -4.79352 | CGACCCAGAACAAAA TCAAGG TAACGT CCTTGA CCGTGTACTGAAGCA psaB 3173015 - 3175243 + | photosystem I P700 chlorophyll a apoprotein A2 TERM 2897 3175276 - 3175306 + T 100 -6.9 -5.63504 | gap 1 TGACCTTAGCCATTG TCCCCCTTGATACC GTTA GGTGA-AAGGGGGA TTTTTTTCTAAAATT Ava_2568 3176100 - 3175804 - | hypothetical protein TERM 2898 3176553 - 3176525 - R 100 -14.7 -4.11304 | opp_overlap 3176525 GCAAGGCACAAAGAA GCCAACACCTGTT GCT AACAAGTGCTGGC TTTACGTAAATGTCA TERM 2899 3176525 - 3176553 + r 86 -10.3 -3.67792 | opp_overlap 3176525 GCAAGGCACAAAGAA GCCAACACCTGTT GCT AACAAGTGCTGGC TTTACGTAAATGTCA Ava_2569 3178714 - 3176621 - | virulence-associated E TERM 2900 3178717 - 3178740 + r 76 -4.5 -5.14698 | opp_overlap 3178722, overlap 3178722 TAATAGATTTCATGA GTTAACCGC CTCCCT GCGGTTTGC TTTTGTTTTGGATTT TERM 2901 3178759 - 3178790 + r 85 -9.5 -4.14598 | gap 1 TGTTTTGGATTTCTA GAGCCGTCATGTGT TCGCT GCAC-TGGCGGCTC TTTGGTTTGCTTAGA Ava_2570 3179099 - 3178863 - | hypothetical protein Ava_2571 3179899 - 3179717 - | hypothetical protein Ava_2572 3181053 - 3180223 - | hypothetical protein TERM 2902 3181081 - 3181109 + r 100 -11.7 -5.04222 | opp_overlap 3181081 TAATTTGTCTGATAA GCCAGCTTAGGTT CGC AGCCTTGGCTGGC TTTTTGCTTTCCTTA Ava_2573 3181425 - 3181165 - | hypothetical protein Ava_2574 3182241 - 3181984 - | hypothetical protein TERM 2903 3182276 - 3182257 - R 78 -5.8 -4.84311 | gap 1, opp_overlap 3182257 3182259, overlap 3182259 CCGCAGATAACAAAA GC-CTGTAA AGC TTACAGTGC TTAAGTTCCAGGCTC TERM 2904 3182619 - 3182629 + r 70 -5.4 -4.48741 | opp_overlap 3182622 AAGCTCTTTCAGAGC GAAC GAA GTTC TTTTGTACTAACTTC Ava_2575 3183537 - 3183094 - | Phage integrase TERM 2905 3183608 - 3183656 + H 100 -10.2 -4.7871 | opp_overlap 3183600 3183615, overlap 3183611 TAAGAATGATAATCG TATCGAAGGGGAAGGGTGCGAG AGACG CTCGCACCCTTCCACACCCCTA TTTTTGATGATCATT TERM 2906 3183611 - 3183653 + H 85 -11.9 -2.99543 | opp_overlap 3183615, overlap 3183608 GAATGATAATCGTAT CGAAGGGGAAGGGTGCGAG AGACG CTCGCACCCTTCCACACCC CTATTTTTGATGATC TERM 2907 3183649 - 3183615 - H 100 -20.1 -3.08471 | opp_overlap 3183611 3183608 GATAATCGTATCGAA GGGGAAGGGTGCGAG AGACG CTCGCACCCTTCCAC ACCCCTATTTTTGAT Ava_2576 3183812 - 3185131 + | transposase IS4 Ava_2577 3185778 - 3185128 - | integrase TERM 2908 3186024 - 3186014 - H 77 -2.6 -5.53288 | GTTAAGTTAAAAAAA TATA AGT TATA AACTAGTCTTATGAG Ava_2578 3186328 - 3187128 + | metallophosphoesterase Ava_2579 3187835 - 3187236 - | hypothetical protein Ava_2580 3188025 - 3189251 + | TPR repeat-containing protein TERM 2909 3189258 - 3189312 + T 81 -9.5 -3.75051 | overlap 3189256 AGTATTTAATATTGG TGATTGGTAATTGGTAATTGGTGAT CGAGC ATTACCCATTACCCATTACCCACCA TATTTTCAGTTAGTA Ava_2581 3190606 - 3189341 - | glycosyl transferase, group 1 Ava_2582 3191923 - 3190694 - | hypothetical protein Ava_2583 3193270 - 3192011 - | glycosyl transferase family protein TERM 2910 3192062 - 3192051 - G 75 -3 -5.08824 | GGTTGATCCAAAAAA TCAT AGGC ATGA TACTCAACTAAGCGG TERM 2911 3193277 - 3193291 + r 74 -5 -4.74767 | overlap 3193286 CTCTTTCATCACATC TTTGTC TCC GGCAAA TTTTGTCTTGCTTGT Ava_2584 3193840 - 3193373 - | hypothetical protein Ava_2585 3194955 - 3193954 - | NAD-dependent epimerase/dehydratase TERM 2912 3193983 - 3193994 + g 79 -3 -5.33026 | TTTGAATGTCGGTAT TTTG CAAC CAAA TTTTTGTTTGACTTA TERM 2913 3195048 - 3195032 - R 70 -6.5 -4.13963 | opp_overlap 3195046 ACTCCCTAAAAAATA TCAGCCG GGT CAGCCGA ACGAAGTTTGTTAAT Ava_2586 3196200 - 3195022 - | DevC protein TERM 2914 3195880 - 3195892 + g 82 -3.3 -5.46698 | GATGGAATATTTTTC TCCAG TTT CCGGA TTTTTTAATTTTGCA TERM 2915 3196001 - 3195983 - G 85 -7.5 -4.84359 | opp_overlap 3195983 3195982 CGAGTGCGAGAAAAA CTTTGAC TTGCC GTCAAAG ATTTATATTGTGAAC TERM 2916 3196098 - 3196074 - G 88 -10.7 -3.86916 | TAGCACTAGAGTAAA GCGCATCTTGG AAA CCAAGCTGCAC AAACATCAGTAAGAC TERM 2917 3196224 - 3196252 + r 70 -6.8 -4.16943 | gap 1, opp_overlap 3196232, overlap 3196228 3196230 3196232 TGTCAATTGATAGTT GTCAGAGACGCGA TCAA TCGCGTCTGT-AC TTTTCAGATATGCGG TERM 2918 3196228 - 3196249 + r 70 -8.7 -3.10545 | opp_overlap 3196232, overlap 3196224 3196230 3196232 AATTGATAGTTGTCA GAGACGCGA TCAA TCGCGTCTG TACTTTTCAGATATG TERM 2919 3196230 - 3196247 + r 79 -11.3 -3.10537 | opp_overlap 3196232, overlap 3196228 3196224 3196232 TTGATAGTTGTCAGA GACGCGA TCAA TCGCGTC TGTACTTTTCAGATA Ava_2587 3197516 - 3196314 - | secretion protein HlyD TERM 2920 3197059 - 3197069 + g 73 -5.4 -4.60041 | opp_overlap 3197059 3197065, overlap 3197010 3197009 TGCGACTCTAAACGA GCAA CAG TTGC TTTTTGAGCATCAAT TERM 2921 3198770 - 3198748 - g 100 -15 -3.60948 | CAACATACTTTTAAA GGTGGTGAAA TGG TTTCACCACC TAAAAGAACAATAGA Ava_2588 3198373 - 3199716 + | ParB family protein TERM 2922 3199832 - 3199793 - f 73 -5.6 -4.56969 | opp_overlap 3199806, overlap 3199806 AATGTGATAAATAAA CCATCTGTAGAGACGCGA TTCA TCGCGTCTTCACCCAAGG ATGTGCTGCAATCAT Ava_2589 3200672 - 3200950 + | hypothetical protein TERM 2923 3201131 - 3201111 - f 85 -9.7 -3.95893 | opp_overlap 3201112, overlap 3201112 AAAACACATATCAAA GTCCCCCTT AAA AAGGGGGAT TTAGGGGGATCGAAA TERM 2924 3201112 - 3201130 + F 100 -13.2 -3.54424 | opp_overlap 3201111 3201112 AAACACATATCAAAG TCCCCCTT AAA AAGGGGGA TTTAGGGGGATCGAA TERM 2925 3201130 - 3201112 - f 93 -13.2 -2.95909 | opp_overlap 3201112, overlap 3201111 AAACACATATCAAAG TCCCCCTT AAA AAGGGGGA TTTAGGGGGATCGAA TERM 2926 3201469 - 3201438 - f 75 -8.8 -3.54459 | gap 1, opp_overlap 3201438 TGAATTTTGCGGAAA GTTCTGTA-GGCGGG TTT CCCGCCGTAGAAAAC TTTCCAAGACGAATT TERM 2927 3203360 - 3203378 + G 72 -9.6 -3.14132 | opp_overlap 3203360 3203370 CTTTGTCGCGGAGAA CTTGCAGG AAG CTTGCAAG TTCATGCAAACCAGC TERM 2928 3203438 - 3203448 + G 71 -6.8 -4.15788 | opp_overlap 3203429 3203438 AGCAAATTGGGAACA TCCC CAA GGGA TTTATTACCGCGCTT Ava_2590 3201618 - 3206912 + | Beta-ketoacyl synthase TERM 2929 3207020 - 3206987 - g 76 -8.1 -4.20531 | gap 1, opp_overlap 3206987 GAGACGCAGCGAAAA GTTCCTCGAAGCCGGG TTT CCCGGCGTAG-GAAAC TTTTCAAGACAGAGG TERM 2930 3208692 - 3208681 - g 85 -5.8 -5.14698 | opp_overlap 3208688 AAATCGAAAACAAAA CACC ATCT GGTG TCACAGCTGATATCA Ava_2591 3206952 - 3208787 + | Short-chain dehydrogenase/reductase SDR TERM 2931 3208934 - 3208918 - f 74 -8.1 -3.68674 | opp_overlap 3208918, overlap 3208916 AAAACCCTCAAAATA TCCTAAA TGA TTTAGGA TTGCTATAGTAGGCC TERM 2932 3208918 - 3208934 + F 70 -8.1 -3.29471 | opp_overlap 3208916 3208918 AAAACCCTCAAAATA TCCTAAA TGA TTTAGGA TTGCTATAGTAGGCC TERM 2933 3210392 - 3210372 - g 76 -10.5 -2.94099 | opp_overlap 3210369 CTTTGTTAGGAGATA CGACGGAAT TTA ATTCCATCG AAAGCTTTTTTGGAG Ava_2592 3209345 - 3210706 + | Beta-ketoacyl synthase Ava_2593 3210892 - 3214221 + | Beta-ketoacyl synthase Ava_2594 3214353 - 3216011 + | 2-nitropropane dioxygenase, NPD TERM 2934 3216759 - 3216744 - g 74 -4 -4.98531 | CTGGTAAAGCAAAAA TCCAAA CTAA TCTGGA AGGTTACGCGATTTG Ava_2595 3216212 - 3217732 + | thioester reductase TERM 2935 3217899 - 3217921 + F 100 -9.2 -4.88228 | opp_overlap 3217903, overlap 3217909 ATTTCATGCGTGTAA CCCAGTTTCT CAG AAAAACTGGG TTTTTCCTGTTGCAT Ava_2596 3218306 - 3219169 + | Short-chain dehydrogenase/reductase SDR TERM 2936 3219239 - 3219221 - T 80 -10.4 -3.33315 | overlap 3219212 TCAATACTGCCAGAA TTTTGGCT GCC AGCCAAAA CCCGCCACGGCAACA Ava_2597 3219919 - 3219206 - | 4'-phosphopantetheinyl transferase TERM 2937 3219294 - 3219306 + g 70 -7.7 -3.61983 | opp_overlap 3219294 ACTAGCTCTAGGAGA CTCCA CGC TGGAG TTGTCTGTAACTTAG TERM 2938 3221028 - 3221000 - g 75 -2.4 -5.27023 | opp_overlap 3221002, overlap 3221002 ACTTTAAAAATAAAA CAGGAAATTGTC GATCA GACAATCACCTT TGTAACTTGTCAGGA Ava_2598 3220031 - 3221080 + | basic membrane lipoprotein TERM 2939 3221638 - 3221648 + G 73 -2.6 -5.15167 | ATTGGCGGCGGCTGG TAAT ACG ATTA TTTTTATTAGTCATA Ava_2599 3221081 - 3222556 + | ABC transporter-like TERM 2940 3222809 - 3222797 - g 80 -4.9 -5.10877 | opp_overlap 3222797 AGAAGAAATGAAAAA TTTAC ATA GTAAA ATTGATGTTGGAGTT Ava_2600 3222774 - 3222953 + | hypothetical protein TERM 2941 3223016 - 3223029 + G 82 -6.7 -4.89063 | opp_overlap 3223015 3223016 AAAATCAAAAAATAT CCTGA TTTA TCAGG TTTGTTTTTAGATGC Ava_2601 3222953 - 3223618 + | hypothetical protein Ava_2602 3223643 - 3224695 + | inner-membrane translocator TERM 2942 3224762 - 3224776 + F 85 -11.4 -3.40403 | opp_overlap 3224753 TGAAAAGTTTCCTAC GGAGGG AAA CCCTCC TTCTCCTAACGGAGA Ava_2603 3224830 - 3225768 + | inner-membrane translocator Ava_2604 3226227 - 3225772 - | hypothetical protein TERM 2943 3226933 - 3226910 - g 76 -2.5 -5.33785 | overlap 3226920 AATTAGTAGAAAAAA GTTTTAACC ATGTAG AGCTAAAAC GCTTTACACCTGAGA Ava_2605 3226387 - 3227007 + | UbiE/COQ5 methyltransferase TERM 2944 3227059 - 3227005 - T 78 -9.2 -3.55478 | gap 2, opp_overlap 3227010 3227014 3227016 3227025 3227056, overlap 3227009 3227010 3227013 3227056 ACTAAAAAAGCAATA TAAATTCATGATCAAGGAAATCAATT TTATG AGTTGATTTCCTTGATC-T-AATTTA AGTCTTAAATATCTC TERM 2945 3227055 - 3227010 - T 75 -9.4 -3.18419 | gap 1, opp_overlap 3227010 3227014 3227016 3227025, overlap 3227009 3227005 3227013 AAAAGCAATATAAAT TCATGATCAAGGAAATCAATT TTATG AGTTGATTTCCTTGATC-TAA TTTAAGTCTTAAATA TERM 2946 3227010 - 3227055 + T 84 -10.1 -3.77087 | gap 1, opp_overlap 3227009 3227005 3227010 3227013, overlap 3227014 3227016 3227025 AAAAGCAATATAAAT TCATGATCAAGGAAATCAATTT TAT GAGTTGATTTCCTTGATC-TAA TTTAAGTCTTAAATA TERM 2947 3227053 - 3227013 - T 82 -11.4 -2.76629 | opp_overlap 3227010 3227014 3227016 3227025, overlap 3227010 3227009 3227005 AGCAATATAAATTCA TGATCAAGGAAATCAATT TTATG AGTTGATTTCCTTGATCT AATTTAAGTCTTAAA TERM 2948 3227014 - 3227052 + T 100 -17.8 -2.974 | opp_overlap 3227013 3227010 3227009 3227005, overlap 3227010 3227016 3227025 GCAATATAAATTCAT GATCAAGGAAATCAATTT TAT GAGTTGATTTCCTTGATC TAATTTAAGTCTTAA TERM 2949 3227016 - 3227050 + T 100 -14.6 -3.03439 | opp_overlap 3227013 3227010 3227009 3227005, overlap 3227014 3227010 3227025 AATATAAATTCATGA TCAAGGAAATCAATTT TAT GAGTTGATTTCCTTGA TCTAATTTAAGTCTT Ava_2606 3227449 - 3227057 - | alkylhydroperoxidase AhpD core TERM 2950 3227583 - 3227561 - R 82 -7.8 -4.4836 | opp_overlap 3227561, overlap 3227556 TAATAAAAGGCAAAA TCTCTCAG TTCATCG CTGAGAGA TTTTTATTCAAAATA TERM 2951 3227561 - 3227583 + r 100 -8.5 -5.07486 | opp_overlap 3227556 3227561 TAATAAAAGGCAAAA TCTCTCAGT TCATC GCTGAGAGA TTTTTATTCAAAATA Ava_2607 3229076 - 3227847 - | hypothetical protein Ava_2608 3229876 - 3229139 - | hypothetical protein TERM 2952 3230080 - 3230102 + H 78 -9.3 -3.61652 | opp_overlap 3230084, overlap 3230084 GGCAGGTTATATGTT CAAAGTCAT ACACC ATGACTTTG TTAATTGTTTGAAAA TERM 2953 3230235 - 3230245 + H 76 -3.2 -5.33848 | GAGCTTTTTTGTCGG TGCT AAT AGCG TTTTTTAGTTATGAT TERM 2954 3230357 - 3230378 + H 73 -8.9 -3.44146 | opp_overlap 3230356 3230350 3230361, overlap 3230361 CTTTACAATAAGTAT GTAACATTT TTTA AAATGTTAC TTGATTATCGAAGAA TERM 2955 3230870 - 3230895 + H 100 -16.3 -3.5399 | opp_overlap 3230870 ATCGAATGTTCATAA CCCCGACTTTT TCAA AAAAGTCGGGG TTCTATGACTGTAAT TERM 2956 3230895 - 3230870 - H 100 -16.3 -3.3344 | opp_overlap 3230870 ATCGAATGTTCATAA CCCCGACTTTT TCAA AAAAGTCGGGG TTCTATGACTGTAAT TERM 2957 3230945 - 3230966 + H 78 -8.7 -3.73904 | opp_overlap 3230945 TCCATAAATCACAAA GTCCACCTC ATAG GAAGTGGAC TTGTTAACTATATTT TERM 2958 3230966 - 3230945 - H 89 -10.9 -4.17701 | opp_overlap 3230945 TCCATAAATCACAAA GTCCACCTC ATAG GAAGTGGAC TTGTTAACTATATTT Ava_2609 3231418 - 3232047 + | hypothetical protein TERM 2959 3232126 - 3232088 - T 83 -6.2 -5.0925 | TCTCAAAAGCAAAAA TAGCTAATCGCTAG ATTTAAAGTCA CCAGCAATTAGCTA TTTATTACAGTTAAC Ava_2610 3233102 - 3232155 - | F0F1 ATP synthase subunit gamma TERM 2960 3232527 - 3232513 - G 71 -8.6 -3.53012 | opp_overlap 3232505 TCGGCTGCTTCTAAA CCTTGA GTG TCAAGG GGTAGCAAGGTTTGG Ava_2611 3234711 - 3233191 - | F0F1 ATP synthase subunit alpha Ava_2612 3235426 - 3234875 - | F0F1 ATP synthase subunit delta Ava_2613 3235986 - 3235423 - | F0F1 ATP synthase subunit B Ava_2614 3236587 - 3236096 - | F0F1 ATP synthase subunit B' TERM 2961 3236641 - 3236687 + r 86 -9.6 -4.18197 | overlap 3236643 TGAGTTGTGAGTTAT GAGTTATGAGTTATGGGTTAAA GGC TTAAACCCTTAACTCCTAACTA TTTTCACTCAACACT TERM 2962 3236643 - 3236685 + r 93 -12.2 -3.69216 | overlap 3236641 AGTTGTGAGTTATGA GTTATGAGTTATGGGTTAAA GGC TTAAACCCTTAACTCCTAAC TATTTTCACTCAACA TERM 2963 3236702 - 3236732 + r 77 -9.8 -3.29043 | opp_overlap 3236701 ATTTTCACTCAACAC TCAGCACTCAGTAC CCA GTACTCAGTACTGA TTATGCGAAGGGGTT Ava_2615 3236978 - 3236733 - | F0F1 ATP synthase subunit C Ava_2616 3237890 - 3237135 - | F0F1 ATP synthase subunit A TERM 2964 3237620 - 3237604 - G 78 -5.1 -5.06961 | overlap 3237617 ATGAACAAAAACAAA GTGCC AACGAAA GGCAC CCAGGGGCGATATTC Ava_2617 3238446 - 3237943 - | hypothetical protein Ava_2618 3240144 - 3238945 - | hypothetical protein Ava_2620 3241015 - 3244413 + | phycobilisome protein TERM 2965 3244430 - 3244476 + F 75 -8.9 -3.55444 | gap 1, opp_overlap 3244430 3244466 TTGTAGGACAGGAGA CTGGGAACTAGGTACTGGGAAA AAAT TTTTCCAATACCCAG-TCTCAG TTTAGGGACTGGGGA Ava_2621 3244850 - 3245335 + | phycobilisome protein Ava_2622 3245401 - 3245889 + | allophycocyanin subunit beta Ava_2623 3246105 - 3246311 + | CpcD phycobilisome linker-like TERM 2966 3246351 - 3246368 + F 95 -7.7 -5.35354 | opp_overlap 3246351 AGTTAAGTTATGAGA GGGGTCT GTTT AGACCTC TTTTTTCATTCTCTG Ava_2624 3246478 - 3247293 + | hypothetical protein Ava_2625 3247741 - 3247301 - | hypothetical protein Ava_2626 3248167 - 3247943 - | hypothetical protein Ava_2627 3248490 - 3248245 - | hypothetical protein TERM 2967 3248551 - 3248522 - R 100 -9.3 -4.90917 | gap 1, opp_overlap 3248522 AAACCTAAGCAAAAA GCCCGTCAGTGCTG AAT CA-CACTACCGGGC TTGTAAACTTCTCAT Ava_2628 3249073 - 3248678 - | hypothetical protein TERM 2968 3249313 - 3249296 - H 76 -4.9 -4.98255 | TCCCAATCACAAAAA TTCATCC CCAG GGATAAA ATAGAGGACTTTAAT TERM 2969 3249431 - 3249445 + H 84 -4.2 -5.44119 | CAGTATGAATATTTC CTTGGC ACA GCTAGG TTTTTTTGGACTGAC TERM 2970 3250410 - 3250397 - g 71 -2.3 -5.09895 | opp_overlap 3250375 TATTTATTTAAAAAA GTAGC CGAA GCTTC TCACGAAAGTTGCTT TERM 2971 3251459 - 3251484 + G 72 -7.7 -3.76224 | gap 1 TCAGTGAGATTTAGT CCTGATGGCAAA TAC TTTGCTA-CAGG TTTGATGAATGGAGA TERM 2972 3251915 - 3251897 - g 70 -7.4 -3.86916 | GATCAGCATATCAAA CTGTGGGA TGT TGCCACAG GTAAGTGTCTGAAGA Ava_2629 3249644 - 3253309 + | Fis family transcriptional regulator TERM 2973 3253356 - 3253321 - f 82 -10.6 -3.54459 | gap 1, opp_overlap 3253319, overlap 3253322 TTAAGTTTCTTCAAA CCAGATCCCTGACTTCT TCC AGAAGTT-GGGATCTGA AACTTTGCAAATGTT TERM 2974 3253355 - 3253322 - f 83 -11.9 -2.72461 | gap 1, opp_overlap 3253319, overlap 3253321 TAAGTTTCTTCAAAC CAGATCCCTGACTTCT TCC AGAAGTT-GGGATCTG AAACTTTGCAAATGT TERM 2975 3254788 - 3254774 - g 79 -7.8 -4.30177 | opp_overlap 3254773 CAGGATATGAATAAA GCTGGA TTA CCCAGC AGTTACTTTTTGATT TERM 2976 3254853 - 3254841 - g 71 -4.8 -4.73864 | opp_overlap 3254841, overlap 3254847 TGAATGAAGATAAAA CCGA AATTA TCGG TTATGAACCAACAAC Ava_2630 3253559 - 3255331 + | cobalamin B12-binding TERM 2977 3256345 - 3256361 + G 74 -9.5 -3.2827 | CGGTATTGATTACGA TTTCTGG AAC CCAGAAA TTGATCGTTACATCC TERM 2978 3256523 - 3256505 - g 89 -7.4 -4.96646 | TTAGATAATCAAAAA GGTGTACA TCT TGTCCACC ACGCCATTTATCATT TERM 2979 3256865 - 3256853 - g 74 -4.1 -4.93296 | TTACCACCAGAAAAA CGCAA TGG TTACG TATTTTATCAATCTG glgA 3255569 - 3257047 + | glycogen synthase TERM 2980 3257064 - 3257094 + T 93 -6.3 -5.93809 | gap 2, opp_overlap 3257068 3257071, overlap 3257072 TGAATAATTTGTAAT TCAAGTAGGGTGGGC AAT GCCCACC-T-TTTGA TTTTTTTTGTAGGAG TERM 2981 3257089 - 3257071 - T 75 -10.2 -2.78712 | opp_overlap 3257064 3257072, overlap 3257068 TTTGTAATTCAAGTA GGGTGGGC AAT GCCCACCT TTTGATTTTTTTTGT TERM 2982 3257072 - 3257088 + T 100 -13.7 -4.99665 | opp_overlap 3257071 3257068, overlap 3257064 TTGTAATTCAAGTAG GGTGGGC AAT GCCCACC TTTTGATTTTTTTTG Ava_2632 3258664 - 3257249 - | menaquinone-specific isochorismate synthase TERM 2983 3258042 - 3258052 + g 78 -4 -5.16237 | TTATATCTTTCTCCA TTAG TCA CTAA TTTTTTACTGAGATT TERM 2984 3258190 - 3258206 + g 73 -3.7 -5.04987 | overlap 3258191 TAACTGCATTCATCA CCAATGT ACA ACATTGA TTTTTTACAGATATT Ava_2633 3258945 - 3259850 + | 1,4-dihydroxy-2-naphthoate octaprenyltransferase TERM 2985 3259909 - 3259933 + F 72 -9.3 -2.72511 | opp_overlap 3259897 3259911, overlap 3259908 ATACTGTTGGCGAAT TATTGAGGGGT TAA GCCCCTCAAGA GTTTGGAACAGTGGA TERM 2986 3259931 - 3259911 - f 78 -11.2 -2.71011 | opp_overlap 3259909 3259908, overlap 3259897 ACTGTTGGCGAATTA TTGAGGGG TTAAG CCCCTCAA GAGTTTGGAACAGTG TERM 2987 3261123 - 3261110 - g 74 -6.7 -4.3129 | opp_overlap 3261110 GATTTAGTAGGAAAA GTTCC CCCC GGAAC TAGTTGGCAAGCAAC Ava_2634 3260078 - 3261646 + | transposase IS4 TERM 2988 3261766 - 3261788 + F 100 -15.6 -3.53761 | overlap 3261757 CATAAGGGTTTTAAG CCTTTCCCCG TGT CGGGGAGAGG TTTGGAGAGGGGTTC Ava_2635 3261934 - 3262896 + | O-succinylbenzoate synthase Ava_2636 3262881 - 3264272 + | O-succinylbenzoic acid--CoA ligase Ava_2637 3265701 - 3264346 - | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase TERM 2989 3265493 - 3265515 + g 75 -10.6 -2.87344 | opp_overlap 3265491 3265490 3265488 TCATCAACAATAGCC GCGATCGC ACCATTA GCGATCGC TGTCTGGACAAACTC TERM 2990 3265893 - 3265906 + r 78 -9.5 -3.53444 | opp_overlap 3265889, overlap 3265901 3265905 GGGGGACGCAACCGT CCCCC AATC GGGGG TTTGGGGGAGAATCC TERM 2991 3265901 - 3265933 + r 78 -9.1 -3.80733 | opp_overlap 3265889, overlap 3265893 3265905 3265908 CAACCGTCCCCCAAT CGGGGGTTTGGGGGA GAA TCCCCCAAGTCTTGG TTCTTCTGAAATCGA TERM 2992 3265905 - 3265929 + r 95 -12.9 -3.58208 | opp_overlap 3265889, overlap 3265893 3265901 3265908 CGTCCCCCAATCGGG GGTTTGGGGGA GAA TCCCCCAAGTC TTGGTTCTTCTGAAA TERM 2993 3265908 - 3265926 + r 88 -13.2 -2.61042 | opp_overlap 3265889, overlap 3265905 3265901 CCCCCAATCGGGGGT TTGGGGGA GAA TCCCCCAA GTCTTGGTTCTTCTG TERM 2994 3266074 - 3266044 - R 93 -12 -3.91798 | opp_overlap 3266039, overlap 3266046 TAAGTTCTAACTAAA CATGCCAAAGAAGT TAA ACTCCTTTGGCACA CTTAGTATATAAGTA TERM 2995 3266072 - 3266046 - R 100 -14.6 -3.54414 | opp_overlap 3266039, overlap 3266044 AGTTCTAACTAAACA TGCCAAAGAAGT TAA ACTCCTTTGGCA CACTTAGTATATAAG Ava_2638 3266584 - 3266138 - | hypothetical protein TERM 2996 3266218 - 3266228 + g 71 -4 -4.78597 | opp_overlap 3266218 AAGCTTGATATAAAT CTTT TAA AAAG TTTGTTTCTTCTTCA TERM 2997 3266918 - 3266930 + H 78 -4.1 -5.38054 | CACCTGTTGAATTCT GTGCT GCT AGTAC TTTTTGTTTCTCCAC Ava_2639 3267459 - 3268529 + | dTDP-glucose 4,6-dehydratase TERM 2998 3268934 - 3268922 - g 74 -4.1 -5.0133 | CATCGTGTCAAAAAA CTAGC CTT ACTAG ATATTGCACCCACCC Ava_2640 3268553 - 3269137 + | putative hydrolase Ava_2641 3269211 - 3269594 + | transposase Ava_2642 3269636 - 3270004 + | transposase IS4 Ava_2644 3272664 - 3270607 - | hypothetical protein TERM 2999 3271352 - 3271338 - G 73 -5.7 -4.46581 | opp_overlap 3271338 3271337 GAAAATTCGATAAAA CCCAA TTTGC TTGGG ATTTCATTTTTAAAT TERM 3000 3271601 - 3271591 - G 81 -5.4 -5.15167 | opp_overlap 3271570 GAGCATTAAGAAAAA TGCT ACT AGCA ATATATCACTTTGGT TERM 3001 3272085 - 3272073 - G 79 -7.7 -4.28548 | ATGCAGCGATGAAAA CCTCA GGG TGAGG CCATCGCAGATAAAA Ava_2645 3273210 - 3273419 + | hypothetical protein Ava_2646 3273459 - 3273845 + | hypothetical protein TERM 3002 3273929 - 3273942 + G 71 -6.7 -4.08064 | opp_overlap 3273935 3273936 TTTTTGCGGGATGCC CCAGA ACGT TCTGG TTTTGAACCAGAATT Ava_2647 3273845 - 3274303 + | ferredoxin TERM 3003 3274370 - 3274313 - T 84 -4.5 -5.49569 | gap 1, opp_overlap 3274318 3274320 3274322 3274328, overlap 3274327 3274328 3274333 TATTAACATAAAAAA TTAAATCTATAAAAGTAAAAGGACTGTT AAT AACAGCCCTTTTATTTTTGT-GATTTTT TTTAAGTCTCGATTT TERM 3004 3274318 - 3274365 + T 100 -11 -5.83822 | gap 1, opp_overlap 3274313 3274327 3274328 3274333, overlap 3274320 3274322 3274328 ACATAAAAAATTAAA TCTATAAAAGTAAAAGGACTGTT AAT AACAGCCCTTTTATTTTTGT-GA TTTTTTTTAAGTCTC TERM 3005 3274320 - 3274364 + T 95 -12.5 -4.08666 | opp_overlap 3274313 3274327 3274328 3274333, overlap 3274318 3274322 3274328 ATAAAAAATTAAATC TATAAAAGTAAAAGGACTGTT AAT AACAGCCCTTTTATTTTTGTG ATTTTTTTTAAGTCT TERM 3006 3274322 - 3274362 + T 95 -12.9 -3.61589 | opp_overlap 3274313 3274327 3274328 3274333, overlap 3274320 3274318 3274328 AAAAAATTAAATCTA TAAAAGTAAAAGGACTGTT AAT AACAGCCCTTTTATTTTTG TGATTTTTTTTAAGT TERM 3007 3274357 - 3274327 - T 95 -10.6 -4.51799 | opp_overlap 3274322 3274320 3274318 3274328, overlap 3274313 3274328 3274333 ATTAAATCTATAAAA GTAAAAGGACTGTT AAT AACAGCCCTTTTAT TTTTGTGATTTTTTT TERM 3008 3274328 - 3274356 + T 100 -11.9 -5.14894 | opp_overlap 3274327 3274313 3274328 3274333, overlap 3274322 3274320 3274318 TTAAATCTATAAAAG TAAAAGGACTGTT AAT AACAGCCCTTTTA TTTTTGTGATTTTTT TERM 3009 3274356 - 3274328 - T 100 -14.1 -3.29995 | opp_overlap 3274328 3274322 3274320 3274318, overlap 3274327 3274313 3274333 TTAAATCTATAAAAG TAAAAGGACTGTT AAT AACAGCCCTTTTA TTTTTGTGATTTTTT TERM 3010 3274351 - 3274333 - T 100 -9.6 -4.73108 | opp_overlap 3274328 3274322 3274320 3274318, overlap 3274328 3274327 3274313 TCTATAAAAGTAAAA GGACTGTT AAT AACAGCCC TTTTATTTTTGTGAT TERM 3011 3274498 - 3274511 + T 73 -5.3 -4.68539 | overlap 3274497 GGTTCAAAGGATCAT GTTGT GACA ACAAC TTTTCTACTTTTGCT Ava_2648 3274759 - 3274475 - | YiaAB two helix TERM 3012 3275091 - 3275071 - R 93 -7.6 -5.10004 | opp_overlap 3275071 AAAAATAAGTAAAAA CTGGCACA GGAAA TGTACCAG TTTTAGGATTGTCAT Ava_2649 3276724 - 3275144 - | hypothetical protein Ava_2650 3277355 - 3276750 - | hypothetical protein TERM 3013 3277513 - 3277474 - R 100 -15.8 -3.15861 | gap 1, opp_overlap 3277479, overlap 3277479 GAGGAGGGGCAGGAA GAGAAG-TCGCCAAGAGGG TCT CCCTCCGGGCGAACTTCCC TACGGGATGCTACGC TERM 3014 3277507 - 3277479 - R 88 -10.9 -3.71284 | opp_overlap 3277479, overlap 3277474 GGGGCAGGAAGAGAA GTCGCCAAGAGGG TCT CCCTCCGGGCGAA CTTCCCTACGGGATG TERM 3015 3277928 - 3277961 + r 100 -12.7 -4.41047 | gap 1, opp_overlap 3277928 3277931, overlap 3277932 ATAAAATTCATTAAA GAAGGGTAGAGAA-CA GGA TGATTCTCTACCTTTC TTTTCATTAGGAGGT TERM 3016 3277961 - 3277928 - R 88 -10.5 -3.84887 | gap 1, opp_overlap 3277928 3277932, overlap 3277931 ATAAAATTCATTAAA GAAGGGTAGAGAA-CA GGA TGATTCTCTACCTTTC TTTTCATTAGGAGGT TERM 3017 3277958 - 3277931 - R 70 -6.4 -4.03174 | gap 1, opp_overlap 3277928 3277932, overlap 3277928 AAATTCATTAAAGAA GGGTAGAGAA-CA GGA TGATTCTCTACCT TTCTTTTCATTAGGA TERM 3018 3277932 - 3277957 + r 100 -9.9 -4.78077 | gap 1, opp_overlap 3277931 3277928, overlap 3277928 AATTCATTAAAGAAG GGTAGAGAA-CA GGA TGATTCTCTACC TTTCTTTTCATTAGG Ava_2651 3280566 - 3278170 - | recombination and DNA strand exchange inhibitor protein TERM 3019 3279333 - 3279291 - G 87 -8.5 -4.45544 | overlap 3279292 CTTCATCAAGTAAAA CTAGGGATTGGGGACGA TATTCTTCT TTGTCCCCAGTCCCTAA AGCATTTAAAATCCG TERM 3020 3279332 - 3279292 - G 76 -9.8 -3.26844 | overlap 3279291 TTCATCAAGTAAAAC TAGGGATTGGGGACGA TATTCTTCT TTGTCCCCAGTCCCTA AAGCATTTAAAATCC TERM 3021 3280658 - 3280674 + r 79 -8.1 -4.09276 | opp_overlap 3280646 3280658, overlap 3280662 TAAGTTGACAGTAGA CTGTTAA CAG TTAACAG TTGTTATATTTATTA Ava_2652 3281698 - 3280697 - | hypothetical protein TERM 3022 3280788 - 3280798 + g 70 -5.4 -4.51812 | ATTGCTAGTGATTGT TCTG CCT CAGA TTTATTATTATCAAA TERM 3023 3281781 - 3281799 + H 76 -4.6 -5.24129 | CCTGACAGCTATTCA TCAATAAG TTA CTGATTGA TTTTTTATGCAGGAA TERM 3024 3282590 - 3282576 - g 70 -10 -2.54896 | TTTTTATTCAAGCTA CGGTAG TTT CTACCG CCCACTTGTCACCAG Ava_2653 3282092 - 3283255 + | inositol-5-monophosphate dehydrogenase TERM 3025 3283464 - 3283487 + F 100 -16 -3.54503 | opp_overlap 3283462 TCCTCACACCACACT CCGCCCGGAC TACT GTTCGGGCGG TTCCTTATGTATTAC TERM 3026 3283793 - 3283777 - g 81 -5.1 -5.13343 | GAAGGTAAAATAAAA GTGGTGA AAG TCAACAC TGATGAGAATCCGCA Ava_2654 3283615 - 3283938 + | thioredoxin TERM 3027 3284009 - 3284041 + F 75 -7.2 -4.30719 | gap 1, opp_overlap 3284008, overlap 3284010 ATATTTGTCCAATAC T-TTATGAGGTGCAA ATTC TAGCACCTCATAATA TTTCTTATGGACGAA TERM 3028 3284010 - 3284039 + F 93 -12.3 -3.75817 | opp_overlap 3284008, overlap 3284009 TATTTGTCCAATACT TTATGAGGTGCAA ATTC TAGCACCTCATAA TATTTCTTATGGACG Ava_2655 3284211 - 3285281 + | hypothetical protein Ava_2656 3285444 - 3286763 + | peptidase S13, D-Ala-D-Ala carboxypeptidase C TERM 3029 3286868 - 3286913 + F 89 -10.7 -4.08144 | gap 1, overlap 3286869 3286909 TTAAGCAGGTACTTC GCTGAAGCATGGGTGATTGTGA TGA TTACAGTCAC-CATGCTTTAGA TTTCTAATTCATGCG TERM 3030 3286869 - 3286912 + F 100 -14.2 -3.04404 | gap 1, overlap 3286868 3286909 TAAGCAGGTACTTCG CTGAAGCATGGGTGATTGTGA TGA TTACAGTCAC-CATGCTTTAG ATTTCTAATTCATGC TERM 3031 3287552 - 3287568 + G 91 -3.6 -5.88565 | opp_overlap 3287552 CTCAGCAACATTATA GGCTGG TACAC CCATCC TTTTTTTGTTCTAAC TERM 3032 3287863 - 3287877 + G 80 -10 -3.68292 | TTTTGACACTATCTG GAACGG TAT CCGTTC TTCTCTATTGAAACT TERM 3033 3288076 - 3288090 + G 79 -8.6 -4.20367 | overlap 3288075 TTCTTATCCTGGTGT GCAACT TGC AGTTGC TTATTTATTAGGAAC Ava_2657 3286940 - 3288583 + | hypothetical protein Ava_2658 3288735 - 3289097 + | DOPA-dioxygenase-like Ava_2659 3289098 - 3289268 + | hypothetical protein TERM 3034 3289338 - 3289360 + G 77 -4.8 -5.00884 | opp_overlap 3289336, overlap 3289340 TAGAAGCTGCAAATG CTCCAAAGCA ACA TGATTTGGTG TTTTTTGAACCCCGT TERM 3035 3289401 - 3289418 + G 100 -14.1 -4.31166 | ATACCGCCATTTTAG CCGCCGG ATTT CCGGCGG TTTGTGTATTTGTAC Ava_2660 3289277 - 3290302 + | D-lactate dehydrogenase Ava_2661 3292564 - 3290510 - | hypothetical protein TERM 3036 3291643 - 3291675 + g 72 -6.5 -4.31815 | gap 2, opp_overlap 3291637 3291646 CCACTAAATTTGGAT CAACTCC--AACCAG TTGTC CTGGTTCTGGAGTTG TTTCTGTTCTAATTT TERM 3037 3293481 - 3293464 - R 100 -11.3 -5.74122 | GATTATACAAAAAAA GACGCGA TTGC TCGCGTC TCCACAAGGTTGATT Ava_2662 3293800 - 3293513 - | hypothetical protein TERM 3038 3293882 - 3293898 + r 73 -9.5 -2.81966 | opp_overlap 3293882 3293881, overlap 3293894 AAGTATGTGTAAAAT TTGAGGA ACT TCCTCAA TATACTGAGCTTTAC TERM 3039 3293898 - 3293882 - R 74 -9.5 -3.07259 | opp_overlap 3293882 3293894, overlap 3293881 AAGTATGTGTAAAAT TTGAGGA ACT TCCTCAA TATACTGAGCTTTAC Ava_2663 3295093 - 3294260 - | DNA adenine methylase TERM 3040 3295038 - 3295068 + g 73 -6 -4.4448 | AACCTACTTTTACCC CCAGCCCACTTTAA AAA TGGACGTGGGCAGG TTTCTTTAGGGATTT Ava_2664 3295254 - 3295460 + | hypothetical protein rbfA 3295640 - 3296041 + | ribosome-binding factor A TERM 3041 3296201 - 3296223 + F 85 -9.9 -3.93864 | opp_overlap 3296197 CTCACCAACAGTTGA CAGACGTGA CTCAA TCGCGTCTG TTTAAATTTATTAGT Ava_2666 3297227 - 3297463 + | hypothetical protein TERM 3042 3297703 - 3297732 + T 100 -15.2 -3.6053 | overlap 3297699 TGTAAAATCTCTGTT CGGGGTAGTTTA CCGTGT TAAACTACCCCG TTAATTTCTCAGGGA Ava_2667 3298191 - 3297841 - | hypothetical protein TERM 3043 3298170 - 3298149 - G 71 -8.8 -3.34803 | overlap 3298147 3298145 AAAAACTGAAAGACA CTGAACCT TCAACT AGGTTCAG CACAAGAGGAGTAGA TERM 3044 3298362 - 3298352 - R 72 -4 -4.93365 | TCCCAGAATCAAAAA CTAA ACT TTAG CCAGAGTCACCTTCT dcd 3298951 - 3298352 - | deoxycytidine triphosphate deaminase Ava_2669 3299530 - 3298994 - | cob(I)yrinic acid a,c-diamide adenosyltransferase Ava_2670 3299845 - 3300399 + | adenylate kinase rph 3300639 - 3301382 + | ribonuclease PH Ava_2672 3302961 - 3301420 - | amine oxidase TERM 3045 3301509 - 3301499 - G 73 -8.2 -3.6249 | opp_overlap 3301503, overlap 3301500 CATAAAATACCAGAA GCGG CTA CCGC CGGGACACCAATGCC TERM 3046 3302304 - 3302291 - G 71 -4.5 -4.68724 | gap 1 TCACCCAACATAAAA GCCACC TCT GG-GGC AATTGTGCCGTGTGC TERM 3047 3302676 - 3302642 - G 84 -11.6 -3.07962 | CTGTACACTGCAACA GTTCCCTCAGGAAAAT GGT ATTTTCCTAAAGGATC ATACGGTACAACTGG Ava_2673 3303026 - 3303808 + | ABC transporter-like TERM 3048 3304905 - 3304891 - g 75 -5.7 -4.652 | overlap 3304895 AAATGATCCGAAAAA TGCAG TGTTG CTGCA ACAGACTTTAGATTC Ava_2674 3303878 - 3305290 + | hypothetical protein Ava_2675 3307445 - 3305319 - | PAS/PAC sensor hybrid histidine kinase TERM 3049 3306504 - 3306514 + g 74 -4 -4.92756 | CAACAGACGCGCCCG TTCT TCG AGAA TTTGTTTTTGCTCAT Ava_2676 3309611 - 3308328 - | phosphoesterase, RecJ-like TERM 3050 3308615 - 3308649 + g 100 -10 -4.90381 | opp_overlap 3308624 GCTCATCATCTTCAT CGTGAACAATGCCGTA AAC TACGGCAGTGTGGACG TTTTCTTCTGTTACC TERM 3051 3308640 - 3308624 - G 84 -10.9 -3.63515 | opp_overlap 3308615 CTTCATCGTGAACAA TGCCGTA AAC TACGGCA GTGTGGACGTTTTCT TERM 3052 3310536 - 3310516 - R 81 -5.3 -5.1963 | opp_overlap 3310516 3310514 3310517, overlap 3310517 GCTAATTAAGAAAAA TCCCCGG TGGGTAG CCGGGGG TGTTGATAATTAATT TERM 3053 3310517 - 3310535 + r 71 -9.5 -2.52082 | opp_overlap 3310516 3310517, overlap 3310516 3310514 CTAATTAAGAAAAAT CCCCGGT GGGTA GCCGGGG GTGTTGATAATTAAT TERM 3054 3310535 - 3310517 - R 78 -8.8 -3.70694 | opp_overlap 3310517 3310516 3310514, overlap 3310516 CTAATTAAGAAAAAT CCCCGG TGGGTAG CCGGGG GTGTTGATAATTAAT Ava_2677 3312254 - 3310650 - | virulence factor MVIN-like Ava_2678 3312849 - 3312343 - | pentapeptide repeat-containing protein TERM 3055 3312468 - 3312520 + g 73 -2.8 -5.22039 | opp_overlap 3312469 3312481 AATCAGCACCAGTAA TGTCAGCATCATAGAAGCGACT ACGGGTTAA AGTTGCTTCTGTGAAAATGGCA TTTTTTAAATTTGCA TERM 3056 3312616 - 3312606 - G 79 -6.8 -4.63932 | TAGCCTTTAATAAAA CACC TTT GGTG AGAATAGCATTAGTT Ava_2679 3314534 - 3313023 - | cell envelope-like transcriptional attenuator Ava_2680 3314651 - 3315715 + | mannose-1-phosphate guanylyltransferase (GDP) TERM 3057 3316989 - 3317014 + G 89 -6.3 -5.28826 | ATACTATAACGTTAG TTTGACTGAGA TGAA TTTTAGTCAAA TTTTTTATGAAATTT Ava_2681 3315898 - 3317541 + | hypothetical protein Ava_2682 3317667 - 3318647 + | ABC transporter-like Ava_2683 3318665 - 3319453 + | putative ABC-2 type transport system permease protein Ava_2684 3321225 - 3319564 - | Serine/threonine protein kinase Ava_2685 3322182 - 3321328 - | Alpha/beta hydrolase fold Ava_2686 3322589 - 3323170 + | hypothetical protein Ava_2687 3323610 - 3323257 - | hypothetical protein Ava_2688 3323902 - 3325233 + | hypothetical protein Ava_2689 3326190 - 3325264 - | hypothetical protein Ava_2690 3326697 - 3327272 + | hypothetical protein Ava_2691 3327329 - 3327862 + | hypothetical protein TERM 3058 3328000 - 3328021 + T 93 -6.6 -5.60556 | gap 1, opp_overlap 3327998 3328000 TGACTACTGACAAGA CTCCA-CCC ACAAG GGGATGGAG TTTTTATTTTGTATT Ava_2692 3329314 - 3328025 - | hypothetical protein TERM 3059 3328079 - 3328092 + g 82 -6.7 -4.78848 | CGCCAGTTGCTGAAT TTCCC GCCA GGGAA TTTTGTGTTTACGGG TERM 3060 3328348 - 3328360 + g 80 -4.8 -5.17353 | opp_overlap 3328348 TCACAGTTAGTAGAA TCCC TGGAC GGGA TTTTTTCATGCCTAT Ava_2693 3329576 - 3330235 + | translation factor SUA5 Ava_2694 3330607 - 3331821 + | hypothetical protein Ava_2695 3332090 - 3332569 + | hypothetical protein Ava_2696 3332686 - 3334842 + | ATP-dependent DNA helicase RecQ TERM 3061 3334878 - 3334921 + T 86 -10.4 -3.66028 | opp_overlap 3334903, overlap 3334879 CACAATCCATCGTGA AGGCTGTTGACAGTTGAC TGTTAAAT GTCAACAGTTAACAGCCC TTATTGGAAGTTATC TERM 3062 3334879 - 3334920 + T 100 -13.9 -2.79135 | opp_overlap 3334903, overlap 3334878 ACAATCCATCGTGAA GGCTGTTGACAGTTGAC TGTTAAAT GTCAACAGTTAACAGCC CTTATTGGAAGTTAT Ava_2697 3335143 - 3334961 - | hypothetical protein TERM 3063 3335422 - 3335364 - R 100 -19.1 -2.60065 | gap 2, opp_overlap 3335362 3335366 3335370, overlap 3335363 ACTTGAGAAAGATAC GTTGTAGGGTGGGCAATGCCCACCGTATC ATG GTTGTGGTGGGCATTGCCCACCCTACA-- AATACTTAGATATTT TERM 3064 3335366 - 3335424 + r 100 -23.5 -2.81509 | gap 2, opp_overlap 3335363 3335364, overlap 3335362 3335370 TTGAGAAAGATACGT --TGTAGGGTGGGCAATGCCCACCGTATC ATG GTTGTGGTGGGCATTGCCCACCCTACAAA TACTTAGATATTTTC TERM 3065 3335370 - 3335388 + r 75 -10.2 -2.88231 | opp_overlap 3335363 3335364, overlap 3335362 3335366 GAAAGATACGTTGTA GGGTGGGC AAT GCCCACCG TATCATGGTTGTGGT Ava_2698 3337138 - 3335540 - | twin-arginine translocation pathway signal Ava_2699 3337487 - 3338038 + | hypothetical protein Ava_2700 3339221 - 3338100 - | hypothetical protein Ava_2701 3339785 - 3339342 - | NUDIX hydrolase Ava_2702 3340197 - 3339817 - | hypothetical protein Ava_2703 3340436 - 3341335 + | methenyltetrahydrofolate cyclohydrolase TERM 3066 3341352 - 3341340 - f 80 -6.3 -4.99134 | ATGTTAAATGAAAAA TTACG AAT CGTAA CATAAATCATCATTT Ava_2704 3341484 - 3342413 + | farnesyl-diphosphate synthase Ava_2705 3342558 - 3343028 + | acid phosphatase/vanadium-dependent haloperoxidase related Ava_2706 3343795 - 3343061 - | hypothetical protein Ava_2707 3344249 - 3343920 - | hypothetical protein Ava_2708 3345100 - 3344381 - | pathogenesis related protein-like Ava_2709 3345959 - 3345213 - | pyridoxal phosphate biosynthetic protein PdxJ Ava_2710 3347847 - 3346090 - | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) TERM 3067 3347572 - 3347549 - G 83 -9.6 -4.07568 | opp_overlap 3347541 3347547 TCTTTGCGTCGAAAA CGCGACTCTA CTAG TACAGTCGCG CCTAAATTTTGGATT Ava_2711 3348894 - 3348160 - | isopentenyl transferase Ava_2712 3349160 - 3349654 + | phosphohistidine phosphatase, SixA Ava_2713 3349921 - 3351057 + | methylcitrate synthase Ava_2714 3351461 - 3352579 + | NADH dehydrogenase subunit H TERM 3068 3352589 - 3352623 + F 79 -10.9 -3.06261 | overlap 3352594 GGGTAATCGGTGATC GGTAATCGGTAATGG AAAAA TCATTACCAATTACC TGTTACCAATTACCA Ava_2715 3352668 - 3353252 + | NADH dehydrogenase subunit I Ava_2716 3353353 - 3353961 + | NADH dehydrogenase subunit J Ava_2717 3353998 - 3354303 + | NADH dehydrogenase subunit K ppnK 3354310 - 3355230 + | inorganic polyphosphate/ATP-NAD kinase TERM 3069 3355254 - 3355293 + F 83 -8.9 -4.2828 | TTTTGTAATTTTTAA TTCGTAATTCGTAAT TAATCATGAT ATTACGAGTTACGAA TTTTACTGAATCAGA Ava_2719 3355679 - 3356482 + | ornithine-acyl[acyl carrier protein] N-acyltransferase TERM 3070 3356541 - 3356531 - g 76 -6.8 -4.52857 | opp_overlap 3356531 ATGCGGCATATAAAA CTCG TGC CGAG TTGGTTGCGGTTTTT TERM 3071 3356782 - 3356755 - g 71 -2 -5.10208 | opp_overlap 3356762 CAATTTGAATAAAAA TATTAGTGACAC AGTG ATGTCTCTCATA ATTGAAAGTCCAGAG TERM 3072 3357383 - 3357408 + G 91 -5.5 -5.72207 | overlap 3357384 ATACCCCTAATTCCT TTCTTACTCGT ACAG ATGAGTAGGAG TTTTTTTGATTTAAA Ava_2720 3356516 - 3358123 + | hypothetical protein Ava_2721 3359297 - 3358140 - | hypothetical protein TERM 3073 3359443 - 3359414 - R 70 -6.4 -4.11027 | opp_overlap 3359411 3359415, overlap 3359415 CTATCAAAAACAGAA GCGGGGGGAA GTTTTGTTGG TTCCCCCCGT TGGTTTAAGTTTATA TERM 3074 3359415 - 3359442 + r 80 -9.9 -3.59895 | opp_overlap 3359415 3359414, overlap 3359411 TATCAAAAACAGAAG CGGGGGGAA GTTTTGTTGG TTCCCCCCG TTGGTTTAAGTTTAT TERM 3075 3359442 - 3359415 - R 76 -9.9 -3.05531 | opp_overlap 3359411 3359415, overlap 3359414 TATCAAAAACAGAAG CGGGGGGAA GTTTTGTTGG TTCCCCCCG TTGGTTTAAGTTTAT Ava_2722 3360119 - 3359490 - | hypothetical protein metG 3361887 - 3360295 - | methionyl-tRNA synthetase TERM 3076 3362431 - 3362443 + G 74 -6.3 -4.51174 | overlap 3362422 TAATGGCGGCTTTAT CGAAT CCG ATTCG TTTTGCTTGTCATCA Ava_2724 3362268 - 3362993 + | phospholipid/glycerol acyltransferase Ava_2725 3363368 - 3364198 + | Alpha/beta hydrolase fold TERM 3077 3364471 - 3364445 - g 70 -6 -4.39318 | overlap 3364446 TAAGCAAACGCAAAA CTTATTTGAGCA AGG TACTCAAATAAC AGGTAACTTCATCAA TERM 3078 3364470 - 3364446 - g 72 -9.5 -3.22506 | overlap 3364445 AAGCAAACGCAAAAC TTATTTGAGCA AGG TACTCAAATAA CAGGTAACTTCATCA Ava_2726 3364344 - 3365390 + | hypothetical protein TERM 3079 3366700 - 3366730 + G 74 -9.8 -3.07876 | overlap 3366697 3366704 CCACCCTCACCGGTG CCAATGTCATTGCC TTA GGTGATGACATTGC TGGTTTGTATACTCC TERM 3080 3366704 - 3366726 + G 74 -9.2 -3.36538 | overlap 3366700 3366697 CCTCACCGGTGCCAA TGTCATTGCC TTA GGTGATGACA TTGCTGGTTTGTATA TERM 3081 3366888 - 3366869 - g 74 -4.9 -4.8048 | opp_overlap 3366868 3366871 3366880 TGCCGACATGAAAAA CACCGGG CCTCGT CCTGGTG GTTCCATCACGGCTG Ava_2727 3365580 - 3367055 + | leucyl aminopeptidase TERM 3082 3367830 - 3367840 + G 74 -6.8 -4.254 | opp_overlap 3367830, overlap 3367827 GGGACAGGGGAACCA CCCA AGG TGGG TTTGTTGAATATTGG Ava_2728 3367296 - 3368324 + | putative glycerol-3-phosphate acyltransferase PlsX TERM 3083 3368554 - 3368564 + G 71 -8.2 -3.57144 | ACCAGAACGGGAATC CGCC AAC GGCG TTTAGCCCTACCGAC Ava_2729 3368428 - 3369420 + | 3-oxoacyl-(acyl carrier protein) synthase III TERM 3084 3369432 - 3369472 + F 100 -9.3 -5.10154 | opp_overlap 3369432 ATAATCAATTAAAAA TTCAAAATGCAAAATTCAA AAA TTGGATTGTTCATTTTGAA TTTTTAATTTTGAAT TERM 3085 3369472 - 3369432 - f 85 -7.1 -4.9445 | opp_overlap 3369432 ATAATCAATTAAAAA TTCAAAATGCAAAATTCAA AAA TTGGATTGTTCATTTTGAA TTTTTAATTTTGAAT TERM 3086 3370380 - 3370365 - g 83 -9 -4.17355 | TAATTTTAAAAAACA TCCGCA ACGC TGCGGA ACTACTAAATTAGAT Ava_2730 3369515 - 3370393 + | acyl-carrier-protein S-malonyltransferase TERM 3087 3370558 - 3370608 + G 100 -11.5 -5.27769 | opp_overlap 3370558 3370572, overlap 3370565 CAATTCCCAATTCAA GGCAAAAGTAAAAAGGCAAAAGA AAAAA TCTTTTACCTTTTTACTTTTTAC TTTTTACTTTTTTAT TERM 3088 3370608 - 3370558 - g 100 -13.7 -3.18199 | opp_overlap 3370558 3370565, overlap 3370572 CAATTCCCAATTCAA GGCAAAAGTAAAAAGGCAAAAGA AAAAA TCTTTTACCTTTTTACTTTTTAC TTTTTACTTTTTTAT TERM 3089 3370565 - 3370615 + G 73 -2.9 -5.24531 | opp_overlap 3370558 3370572, overlap 3370558 CAATTCAAGGCAAAA GTAAAAAGGCAAAAGAAAAAA TCTTTTACC TTTTTACTTTTTACTTTTTAC TTTTTTATCCCCACT TERM 3090 3370594 - 3370572 - g 90 -7.1 -5.10154 | opp_overlap 3370558 3370565, overlap 3370558 AGGCAAAAGTAAAAA GGCAAAAGA AAAAA TCTTTTACC TTTTTACTTTTTACT Ava_2731 3370475 - 3371281 + | 1-acyl-sn-glycerol-3-phosphate acyltransferase TERM 3091 3371315 - 3371326 + F 74 -4.4 -4.97957 | TCTGCTGAAAGTAGG TAGC GATC GCTA TTTTATTGTTGTATG TERM 3092 3371523 - 3371533 + G 75 -3.2 -5.15634 | ATTTTTACGTTTGCA GCTA TTT TGGC TTTTTTACTGAGCTA TERM 3093 3371986 - 3371955 - g 79 -6.6 -4.60255 | ATAATCCCGCAAAAA CGCCGCATTAGATT TACA AATATTATGCGACG CAGTTTTCTAGGATT Ava_2732 3371379 - 3372416 + | hypothetical protein Ava_2733 3372558 - 3372851 + | hypothetical protein Ava_2734 3373421 - 3372918 - | hypothetical protein Ava_2735 3374887 - 3373811 - | tocopherol cyclase TERM 3094 3375320 - 3375309 - g 71 -2.2 -5.14563 | GCCTCCACCAAAAAA GCCT GTGA AAGC ATCGGTTAATCGTTG Ava_2736 3375040 - 3375645 + | heat shock protein DnaJ-like Ava_2737 3376001 - 3376657 + | hypothetical protein TERM 3095 3377292 - 3377333 + T 77 -8.1 -3.83868 | gap 1, opp_overlap 3377292, overlap 3377288 CGTATATTTACCAAA CCGCCATTTGCTAATG-AGA TTT TCTATCTTAGCTGATGGCGG TTAATTTTATTAGTA Ava_2738 3378261 - 3377434 - | metallophosphoesterase TERM 3096 3377624 - 3377638 + g 77 -5 -4.93296 | CGCAGTTTTCGGGGG GCTTTT TTG AGAAGC TTTTTATAATGATAA TERM 3097 3377830 - 3377856 + g 70 -9.5 -2.81547 | opp_overlap 3377834, overlap 3377827 3377834 ATGAAATTCTTTTGA CCAATAGTCAG CCAGT CCGACTATTGG TAATTCATGTCCCAA Ava_2739 3379332 - 3378502 - | metallophosphoesterase TERM 3098 3380225 - 3380235 + G 70 -5.4 -4.55023 | overlap 3380204 ATCGACCCAGTGGGA GCTA TTT TAGC TTTTGTGGTGTTGGA Ava_2740 3379733 - 3381622 + | Sodium/hydrogen exchanger Ava_2741 3382264 - 3381626 - | cytochrome b/b6-like Ava_2742 3383133 - 3382438 - | hypothetical protein TERM 3099 3383677 - 3383693 + G 71 -8.7 -3.25356 | overlap 3383676 TGCAATAGCCTCTCT TGGCATC CAC GGTGCCA TTGCGTTGATTGTGC TERM 3100 3384683 - 3384667 - g 79 -3 -5.26918 | gap 1, overlap 3384649 3384669 ATATTTTACAAAAAA TG-CTCC TAAG GGAGACA GACAAATTAGTCGTT Ava_2743 3383600 - 3385075 + | hypothetical protein Ava_2744 3385598 - 3385233 - | cytochrome c, class I TERM 3101 3385844 - 3385858 + r 70 -6.4 -4.07568 | TATTAATTATGGGTT CTGGCT CTT AGCTAG TTTTGCAGGGGAGCC Ava_2745 3386325 - 3385906 - | plastocyanin Ava_2746 3387310 - 3386819 - | cytochrome c-550 TERM 3102 3386980 - 3386999 + g 72 -7.8 -3.78778 | CGGAAATTTCCTCTA CCCCATCG TAGG TGGTGGGG TTCTTCATATAGTCC Ava_2747 3387458 - 3387303 - | hypothetical protein Ava_2748 3388574 - 3387654 - | binding-protein dependent transport system inner membrane protein Ava_2749 3389560 - 3388571 - | serine/threonine dehydratase TERM 3103 3389333 - 3389344 + g 78 -4.4 -5.1244 | opp_overlap 3389333 CGAAGAAAAAGTCAA CACA CCTT TGTG TTTTTGTGTTGGTGA Ava_2750 3390867 - 3389665 - | hypothetical protein TERM 3104 3391023 - 3390999 - H 73 -10 -2.54504 | opp_overlap 3390997 3390994 3391018, overlap 3390998 3390996 ATTTCTGAAATATAC GTACGGTGGG TAATG CCTACCGTAC CATGGTTTTGGTGGG Ava_2751 3391972 - 3392427 + | response regulator receiver domain-containing protein TERM 3105 3392683 - 3392698 + G 79 -3.2 -5.34309 | TACTCTAACATCATT GGTGGT AGCG ATCGCC TTTTTCTTTCATACT Ava_2752 3392639 - 3393358 + | hypothetical protein Ava_2753 3393769 - 3393879 + | putative transposase TERM 3106 3394038 - 3393997 - T 95 -13.1 -3.38281 | opp_overlap 3394000, overlap 3394000 TGAGCCAAAACTTAA TAAGGGTGCAAGGGTTTTG AAAA CTACACCCCTACACCCTTA TACCCCTACACCCCT TERM 3107 3394035 - 3394000 - T 86 -10.4 -3.81879 | opp_overlap 3394000, overlap 3393997 GCCAAAACTTAATAA GGGTGCAAGGGTTTTG AAAA CTACACCCCTACACCC TTATACCCCTACACC Ava_2754 3395173 - 3394058 - | ferrochelatase TERM 3108 3394476 - 3394494 + g 71 -9.6 -2.91276 | opp_overlap 3394475, overlap 3394475 TGACTTTCGACAATT CCAGAGGT GAA ACCTTTGG CTTTGTGAGGACAAC TERM 3109 3395287 - 3395254 - H 87 -11.9 -3.18264 | TTGCCCACCTAGTAA GTTATTATCCTATCC CCCT GGATGGGATAACAAC AAAAGTGACAATAAT Ava_2755 3395450 - 3396022 + | hypothetical protein Ava_2756 3396288 - 3397550 + | major facilitator transporter Ava_2757 3397712 - 3399610 + | acetolactate synthase 3 catalytic subunit TERM 3110 3399643 - 3399665 + T 100 -10.6 -5.75342 | AATTGATTGTGATGA CGCAGGGT TTTATGT ACCCTGCG TTTTTTTTCAACACA TERM 3111 3399787 - 3399837 + T 85 -9.9 -3.91897 | gap 1, opp_overlap 3399786 3399785 ATATTATTCCAAATT TTGAATGGATTCC-CCTCCCGCTT CCTC AAGCAGTACGAGGAATCCGTTCAA TTTCTGCGTAGCCAC Ava_2758 3400606 - 3399812 - | hypothetical protein Ava_2759 3401379 - 3400885 - | pentapeptide repeat-containing protein gcvT 3401547 - 3402677 + | glycine cleavage system aminomethyltransferase T Ava_2761 3402866 - 3403258 + | glycine cleavage system protein H TERM 3112 3403419 - 3403399 - f 91 -9.8 -4.42619 | opp_overlap 3403399 CAAGAGTTTATAAAA TACCCCTA ACAGG TAGGGGTA TTTGTTGCAAAATAT TERM 3113 3403399 - 3403419 + F 86 -9.8 -4.16284 | opp_overlap 3403399 CAAGAGTTTATAAAA TACCCCTA ACAGG TAGGGGTA TTTGTTGCAAAATAT TERM 3114 3404160 - 3404150 - g 73 -5.4 -4.59773 | TTCGATTTCCAAAAA CCAA TTT TTGG TGCAGTCTTACAATA TERM 3115 3404547 - 3404507 - g 70 -5.5 -4.56775 | overlap 3404508 ATCCGCCGCGAAAAA GCTACCAGTAATATTTGTA CAG CACAGGTATTACTGGCAGT GATGGCGAGTATGTA TERM 3116 3404546 - 3404508 - g 71 -9 -3.33744 | overlap 3404507 TCCGCCGCGAAAAAG CTACCAGTAATATTTGTA CAG CACAGGTATTACTGGCAG TGATGGCGAGTATGT TERM 3117 3405448 - 3405428 - g 77 -4.6 -4.91712 | opp_overlap 3405428, overlap 3405432 GCTAAGGCAGAAAAA CACAGCCA TGAAC TGGCGGCG TTGATGGTGACTTAT Ava_2762 3403463 - 3406387 + | glycine dehydrogenase TERM 3118 3406459 - 3406493 + F 80 -10.8 -3.12402 | opp_overlap 3406458 3406459, overlap 3406461 3406463 AGCCAAAAATAAAGT TCTTTTGGGGTGGGTA GGA TACCCACCCTAATATA TTGGCTAGTAATTTA TERM 3119 3406461 - 3406491 + F 95 -13.4 -3.1154 | opp_overlap 3406459 3406458, overlap 3406459 3406463 CCAAAAATAAAGTTC TTTTGGGGTGGGTA GGA TACCCACCCTAATA TATTGGCTAGTAATT TERM 3120 3406463 - 3406489 + F 100 -16 -3.11316 | opp_overlap 3406459 3406458, overlap 3406461 3406459 AAAAATAAAGTTCTT TTGGGGTGGGTA GGA TACCCACCCTAA TATATTGGCTAGTAA Ava_2763 3406896 - 3408368 + | microcin-processing peptidase 2 TERM 3121 3409475 - 3409516 + G 89 -10.3 -4.0044 | gap 1, opp_overlap 3409491, overlap 3409486 AAAGCTTATCTACTC CCGATGATTTAGGC-AAGCA AAT TGCTTCGCCTTTATTATCGG TTTATGATGATGCTT TERM 3122 3409486 - 3409505 + G 75 -7.2 -4.37211 | gap 1, opp_overlap 3409491, overlap 3409475 ACTCCCGATGATTTA GGC-AAGCA AAT TGCTTCGCC TTTATTATCGGTTTA TERM 3123 3409667 - 3409652 - g 86 -7.6 -4.62069 | CTGGGACGGCAAAAA GGTTGA ATAC TCAACC TACAGGTAATGCTAG Ava_2764 3408685 - 3410025 + | peptidase U62, modulator of DNA gyrase Ava_2765 3410858 - 3410274 - | hypothetical protein TERM 3124 3411141 - 3411127 - R 85 -10 -3.85567 | AATTCCAAATGCAAA CACTCC TGG GGAGTG GGGATCGGTAAATTT Ava_2766 3412505 - 3411177 - | hypothetical protein TERM 3125 3412458 - 3412448 - G 75 -3.2 -5.1287 | CGGACATGGAAAAAA TGCC GTT AGCA ATAATTAGTACCAAA Ava_2767 3412791 - 3416357 + | transcription-repair coupling factor TERM 3126 3416913 - 3416932 + G 71 -3 -4.98531 | gap 1, opp_overlap 3416913 TTGGAATGGTGAAGA TTCTATTCT CAA AGAA-AGAA TTTTTGGTTTAACGG TERM 3127 3418683 - 3418697 + G 78 -10 -3.48395 | AAACCGTCCAGATTT GCGACA AAA TGTCGC TTGTATGGAAACAAT Ava_2768 3416647 - 3419307 + | hypothetical protein TERM 3128 3419292 - 3419343 + T 79 -11 -3.02649 | opp_overlap 3419299 3419301 AATTCAGCATCTGGG TGAAAAATCTTTGTAGAGACGCGA TAAA TCGCGTCTCTACAAACATGAATCG TGTCTGTACTAGAAT TERM 3129 3419336 - 3419299 - T 100 -18.7 -4.57073 | opp_overlap 3419292, overlap 3419301 CATCTGGGTGAAAAA TCTTTGTAGAGACGCGA TAAA TCGCGTCTCTACAAACA TGAATCGTGTCTGTA TERM 3130 3419334 - 3419301 - T 100 -21.3 -2.60032 | opp_overlap 3419292, overlap 3419299 TCTGGGTGAAAAATC TTTGTAGAGACGCGA TAAA TCGCGTCTCTACAAA CATGAATCGTGTCTG Ava_2769 3419937 - 3419419 - | DoxX Ava_2770 3421354 - 3419942 - | FAD-dependent pyridine nucleotide-disulphide oxidoreductase TERM 3131 3421663 - 3421653 - H 81 -4 -5.5353 | TACATTAAGAAAAAA TTAG CAT CTAA CCAAAAGAAGTTTTT TERM 3132 3424497 - 3424485 - g 74 -7.7 -4.03234 | CCGTTTCGAGATAAA CTCCT CAA AGGAG CATCGGCTTTCTATC Ava_2771 3421785 - 3426458 + | multi-sensor hybrid histidine kinase Ava_2772 3426863 - 3426474 - | pentapeptide repeat-containing protein Ava_2773 3427559 - 3427026 - | hypothetical protein TERM 3133 3427426 - 3427454 + g 71 -3.1 -5.0065 | TTTTGCGAAATTTGA GCAGCAGCATCTA AAA TACGTGATGTTGC TTTTATTTGTACCTC Ava_2774 3428270 - 3427572 - | hypothetical protein Ava_2775 3428542 - 3429294 + | hypothetical protein Ava_2776 3430100 - 3429540 - | nuclease (SNase-like) TERM 3134 3430203 - 3430189 - R 93 -12.8 -3.30441 | CACCAGTCGCTACAA CGGGGG GAA CCCCCG CAACGCGCCGGCTCA Ava_2777 3431567 - 3430257 - | aminopeptidase P TERM 3135 3431766 - 3431781 + H 90 -2.6 -6.11392 | TTTTATTAAAAATTG CTGATA TAAC TATTAG TTTTTTTCTTTGTTT TERM 3136 3431853 - 3431823 - H 89 -12 -3.45634 | opp_overlap 3431825, overlap 3431816 3431814 AAACAAGAGCCATAA GATCACCAATTTCT TAA AGAAGTCGGTGATC TATAGATATCAGGAC Ava_2778 3432126 - 3433355 + | Integrins alpha chain Ava_2779 3434203 - 3433436 - | twin-arginine translocation pathway signal TERM 3137 3434176 - 3434154 - G 77 -6.2 -4.61199 | AGGGTAGAGACAAAA GCTGTGGC TAATCCC GCCCCAGC ATAGCCTAGCAACTG Ava_2780 3434806 - 3434207 - | aminodeoxychorismate synthase, glutamine amidotransferase subunit Ava_2781 3435457 - 3435002 - | diacylglycerol kinase Ava_2782 3436127 - 3435597 - | putative metalloprotease Ava_2783 3436326 - 3436171 - | hypothetical protein prfB 3437368 - 3436490 - | peptide chain release factor 2 TERM 3138 3437195 - 3437180 - G 83 -9 -4.23674 | opp_overlap 3437180 TCTCAGCAACATAAA TGCCCA ATCT TGGGCA TCTGTTCCGCCAGCA TERM 3139 3437566 - 3437547 - R 71 -8.6 -3.26031 | gap 1, overlap 3437548 GGTACGTCAAAGATA GTCCTGGGT TTT ACCCAGG-C GGCTAGACAACGTTT TERM 3140 3437779 - 3437752 - R 84 -3.5 -5.60993 | gap 1 CGTCTCACAAAAAAA CCTGAAC-AGTT ACGAG AACAAGTTCAGG ATGGAATTTGTAACA Ava_2785 3438182 - 3437844 - | hypothetical protein Ava_2786 3438738 - 3438421 - | hypothetical protein TERM 3141 3439838 - 3439824 - g 75 -8.6 -3.81 | AGCACCTTAGAACAA TTCCTG CAA CAGGAA CAGCTCAAGCGTGGT TERM 3142 3440801 - 3440785 - g 70 -3.7 -4.87328 | CAGAGAAAGATAAAA TACCC GTAATGG GGGTA GTGGGAGCCAAGGAA thrS 3439086 - 3440933 + | threonyl-tRNA synthetase TERM 3143 3440966 - 3440937 - f 71 -8.7 -3.18429 | gap 1, overlap 3440940 GAAAACTTTTAGTAA TTACTCAGCTGGGT ATG ACCCAGCT-AGAAA AACTCAATCTATTAA TERM 3144 3440963 - 3440940 - f 77 -10.4 -2.78395 | gap 1, overlap 3440937 AACTTTTAGTAATTA CTCAGCTGGGT ATG ACCCAGCT-AG AAAAACTCAATCTAT Ava_2788 3441135 - 3442325 + | hypothetical protein Ava_2789 3443215 - 3442322 - | hypothetical protein Ava_2790 3444595 - 3443282 - | dicarboxylate symporter TERM 3145 3444193 - 3444207 + g 82 -5.6 -5.0065 | opp_overlap 3444191 TATCTTGCAGTAATC CCCAAG GGT CTAGGG TTTTGTTTGTCGGTG TERM 3146 3447256 - 3447232 - g 78 -5.7 -4.87318 | opp_overlap 3447232 GCCAAAATGGAAAAA TTACGATGGTA AGA TTCCAGCGTAA TTGTGATGATAATGG Ava_2791 3444972 - 3447314 + | Serine/threonine protein kinase Ava_2792 3447667 - 3447428 - | hypothetical protein Ava_2793 3448099 - 3447731 - | hypothetical protein TERM 3147 3448946 - 3448959 + G 74 -4.5 -4.78107 | opp_overlap 3448946 ACCAACAGAATATAG TCGCG CAGA TGCGA TTTTTAATACTGCTC Ava_2794 3448371 - 3449279 + | homoserine kinase Ava_2795 3449266 - 3449835 + | hypothetical protein TERM 3148 3449888 - 3449905 + F 100 -9.1 -5.4756 | TACAAAGATTTGTAA CGGTGGT TGGA GCCACCG TTTTTTATTGACGTT TERM 3149 3450436 - 3450467 + G 86 -8.8 -4.34789 | overlap 3450433 ACACACTCGCAATCT TCGCGGCTTG GAAAGTAACCAA CAAGCCGCGA TTATTTTATGGATTG Ava_2796 3450126 - 3451739 + | NAD(P)H-quinone oxidoreductase subunit 4 TERM 3150 3451767 - 3451746 - T 72 -9.5 -2.60199 | overlap 3451745 3451743 3451741 TCTAAGTAAATATAT CTCTCAGCA ATGG TGCTGAAAG TAAATCCTAAATATG TERM 3151 3451790 - 3451817 + T 71 -9.2 -2.53422 | opp_overlap 3451790 3451791, overlap 3451789 3451788 TAAATATGACGGAAA CTAGGGGTGGTT GCCA AACTACCCCTAA AATTTTGTAAAAGTG TERM 3152 3451817 - 3451790 - T 81 -9.2 -3.72678 | opp_overlap 3451789 3451788 3451790, overlap 3451791 TAAATATGACGGAAA CTAGGGGTGGTT GCCA AACTACCCCTAA AATTTTGTAAAAGTG TERM 3153 3451816 - 3451791 - T 77 -10.5 -2.82884 | opp_overlap 3451790 3451789 3451788, overlap 3451790 AAATATGACGGAAAC TAGGGGTGGTT GCCA AACTACCCCTA AAATTTTGTAAAAGT TERM 3154 3451925 - 3451894 - T 70 -8.9 -3.09878 | opp_overlap 3451884 TCGATGCAGGTAATA GGTAATGGGTAAT AGTTCA ATTACCTATTACC AGATTCCTCACCCAC Ava_2797 3452373 - 3451957 - | hypothetical protein Ava_2798 3452765 - 3453481 + | hypothetical protein Ava_2799 3454162 - 3453602 - | hypothetical protein TERM 3155 3453734 - 3453719 - G 75 -6 -4.62669 | CAACGAAATAATAAA GGGGGG TAAG CCACCC AGGAGAGGCGTGATA TERM 3156 3454190 - 3454214 + r 85 -12.9 -2.66106 | opp_overlap 3454193, overlap 3454187 TAATCAGAGTGGAAG TAAGGACGCAC GGT GTGCGTCCCTA TAGATTATTGAGGTG TERM 3157 3454211 - 3454193 - R 100 -14.6 -3.36785 | opp_overlap 3454190 3454187 TCAGAGTGGAAGTAA GGACGCAC GGT GTGCGTCC CTATAGATTATTGAG Ava_2800 3455197 - 3454280 - | hypothetical protein Ava_2801 3455950 - 3455204 - | Short-chain dehydrogenase/reductase SDR Ava_2802 3456036 - 3456953 + | LysR family transcriptional regulator TERM 3158 3458447 - 3458473 + G 79 -6.6 -4.63218 | opp_overlap 3458451, overlap 3458451 AGTCAACGAAGTTCA TAAACCCATTGT TCG ACAACGGGGTTA TTTTATTAAAGGCAA TERM 3159 3458469 - 3458451 - g 83 -9.6 -3.93638 | opp_overlap 3458447 3458451 AACGAAGTTCATAAA CCCATTGT TCG ACAACGGG GTTATTTTATTAAAG Ava_2803 3457416 - 3462833 + | Serine/threonine protein kinase and Signal transduction histidine kinase (STHK) with GAF sensor TERM 3160 3463018 - 3463004 - T 93 -12.8 -3.30124 | CGCCAGTCGCTACAA CGGGGG GAG CCCCCG CAACGCGCTGGCTCA Ava_2804 3464155 - 3463088 - | hypothetical protein Ava_2805 3464513 - 3465382 + | response regulator receiver domain-containing protein TERM 3161 3465746 - 3465726 - g 77 -4.7 -5.07567 | TGATATTGTAAAAAA TGTCCCAAT AGA ACCAGGACA TCAAGAACTTATCAA Ava_2806 3465403 - 3467304 + | sensor protein Ava_2807 3467590 - 3468336 + | hypothetical protein Ava_2808 3471148 - 3468497 - | TPR repeat-containing protein TERM 3162 3471877 - 3471890 + H 91 -9.5 -4.65446 | GCTGAAATCTCTTAA CCCGC ACAG GCGGG TTTTATCTGTATAGT Ava_2809 3471998 - 3473698 + | Serine/threonine protein kinase TERM 3163 3473735 - 3473720 - f 76 -6.2 -4.55721 | opp_overlap 3473720 3473719 AAACCTTATATAAAA TTTGCT TGAA AGCAAA ATTGTGATTAAACGA Ava_2810 3473739 - 3477197 + | filamentous haemagglutinin-like TERM 3164 3477305 - 3477295 - g 71 -6.8 -4.20367 | TGTGGCAACAAATAA CCGA ACT TCGG CACAAGTCACAGCCG Ava_2811 3477221 - 3480643 + | filamentous haemagglutinin-like TERM 3165 3480870 - 3480827 - T 86 -10.4 -3.66874 | opp_overlap 3480842, overlap 3480831 3480834 TGAAGTTGAGCCAAA TCAATGATGTAGAGACGTTG CATG CAACGTCTCTACAGTACAGA ATAAAGTGCATCTTC TERM 3166 3480866 - 3480831 - T 90 -12 -3.54408 | opp_overlap 3480842, overlap 3480827 3480834 GTTGAGCCAAATCAA TGATGTAGAGACGTTG CATG CAACGTCTCTACAGTA CAGAATAAAGTGCAT TERM 3167 3480863 - 3480834 - T 100 -18.1 -2.90283 | opp_overlap 3480842, overlap 3480831 3480827 GAGCCAAATCAATGA TGTAGAGACGTTG CATG CAACGTCTCTACA GTACAGAATAAAGTG TERM 3168 3481239 - 3481275 + T 74 -8.2 -3.73072 | gap 1, opp_overlap 3481244, overlap 3481241 3481244 GGTTCTCCGCAGGAG TACAATTAGTGGCGAGT CCAA GCTC-CCACTAATTGTC TTTAATGCGCGAATT TERM 3169 3481241 - 3481273 + T 82 -10.8 -3.44848 | gap 1, opp_overlap 3481244, overlap 3481239 3481244 TTCTCCGCAGGAGTA CAATTAGTGGCGAGT CCAA GCTC-CCACTAATTG TCTTTAATGCGCGAA Ava_2812 3482715 - 3481516 - | hypothetical protein TERM 3170 3481897 - 3481879 - G 80 -10.4 -3.50893 | opp_overlap 3481883, overlap 3481883 AATCACAGACCACAA TAAAGCTG TCC CAGCTTTA CGTAATGGTGGTAGA TERM 3171 3481893 - 3481883 - G 74 -6.8 -4.38273 | opp_overlap 3481883, overlap 3481879 ACAGACCACAATAAA GCTG TCC CAGC TTTACGTAATGGTGG TERM 3172 3482211 - 3482198 - G 82 -2.3 -5.72118 | opp_overlap 3482198, overlap 3482199 AAAAAACACAAAAAA CCAGC GATC GCTGC TAATATGTATACTCC Ava_2813 3483226 - 3482744 - | MarR family transcriptional regulator TERM 3173 3483407 - 3483377 - R 71 -7 -3.91352 | gap 1 ATAGTGCCAAGTAAA GCATCAACCTCAT AAATTA ACG-GGTTGATGC GAGAAAGGAACTTTA Ava_2814 3484108 - 3483680 - | hypothetical protein TERM 3174 3484354 - 3484339 - H 74 -7.6 -3.91028 | opp_overlap 3484339 AAGGCAAATGAATAA GCAAAC TCCG GTTTGC TTGCTGAATCTACTG TERM 3175 3484416 - 3484401 - H 74 -7.6 -3.94051 | opp_overlap 3484401, overlap 3484394 AAAGCAAATGAATAA GCAAAC TCCG GTTTGC TTGCTAAATTTATGG TERM 3176 3484895 - 3484934 + H 70 -8.1 -3.31792 | gap 1, overlap 3484897 CAGGTATTTATTTAG TTG-TACTACCTCAAACC TTAAT GGTTTGAGGTAGGAGTAA TTCTAGCGATCATAC TERM 3177 3484897 - 3484931 + H 75 -10.1 -2.83271 | overlap 3484895 GGTATTTATTTAGTT GTACTACCTCAAACC TTAAT GGTTTGAGGTAGGAG TAATTCTAGCGATCA Ava_2815 3485092 - 3485862 + | hypothetical protein Ava_2816 3485866 - 3486144 + | hypothetical protein TERM 3178 3486313 - 3486275 - T 77 -10.5 -2.79749 | opp_overlap 3486284, overlap 3486274 3486284 TAGCCGTAACACAAC GGCAATAAAGCGG-GAAGA ACA TCTACACCGCTTT-TTGCC TCCCCTACTTAATAT TERM 3179 3486284 - 3486305 + T 71 -5.1 -4.66609 | gap 1, opp_overlap 3486284 3486275 3486274 CACAACGGCAATAAA GCGG-GAAGA ACA TCTACACCGC TTTTTGCCTCCCCTA Ava_2817 3489995 - 3486405 - | WD-40 repeat-containing protein Ava_2818 3490709 - 3490398 - | hypothetical protein Ava_2819 3491880 - 3490720 - | 8-amino-7-oxononanoate synthase ruvA 3492644 - 3492003 - | Holliday junction DNA helicase motor protein Ava_2821 3493390 - 3492641 - | sucrose-phosphate phosphatase TERM 3180 3493580 - 3493609 + H 82 -11.6 -2.77899 | opp_overlap 3493588, overlap 3493575 CACTTGATTCTGTAC TGTAGAGACGTT ACATGC AACGTCTCTACG TCATTCCTAAACCCC Ava_2822 3493737 - 3494144 + | hypothetical protein Ava_2823 3495587 - 3494379 - | Na+ dependent nucleoside transporter TERM 3181 3495729 - 3495764 + H 79 -10.6 -3.14132 | opp_overlap 3495754 TGGGTGGAGCGATAG CGGAACCCAACA AAGTCTTGAGAA TGTTGGGTTCCG TTCCTCCACCCAACC TERM 3182 3496233 - 3496216 - g 71 -4.1 -4.78107 | overlap 3496217 TATTATTACTAAAAA CCTCTGC CCTC ACAGAGA TTGGGGAATACCGTT cobS 3495846 - 3496604 + | cobalamin synthase Ava_2825 3497736 - 3496819 - | rhodanese-like protein TERM 3183 3497563 - 3497553 - G 71 -4 -4.76963 | overlap 3497546 GTAGATAAGATAAAA CATT ATC AATG CTTAGACGCGAACCA Ava_2826 3498589 - 3497957 - | hypothetical protein TERM 3184 3499861 - 3499871 + G 75 -8.2 -3.86835 | AGTGCAGACAGATTT GCCG AGA CGGC TTTACTAATGTTTGA TERM 3185 3500020 - 3500010 - g 71 -8.2 -3.41795 | AAAGGTGCATGATAA CCGC CAA GCGG CTAAAAAGGCTGTGA Ava_2827 3498673 - 3500085 + | phospholipid/glycerol acyltransferase TERM 3186 3500135 - 3500118 - T 89 -11.3 -3.9461 | opp_overlap 3500120 TTGGGTGAAGAAGAA GACGCGA TGAA TCGCGTC TCTACAAGGTGGTTT Ava_2828 3502170 - 3500236 - | iron-hydroxamate transporter permease subunit Ava_2829 3503184 - 3502282 - | twin-arginine translocation pathway signal Ava_2830 3503987 - 3503181 - | ABC transporter-like Ava_2831 3505272 - 3504277 - | hypothetical protein TERM 3187 3504588 - 3504609 + g 75 -5.1 -4.75372 | opp_overlap 3504588 AACCACGATAAAAGG GGCGAAGTT GACT AATATCGCC TTTTTGATAGATAAT Ava_2832 3506381 - 3505377 - | esterase/lipase/thioesterase TERM 3188 3505488 - 3505468 - G 79 -7 -4.66318 | overlap 3505482 ATCATCCGAATAAAA CTATGAAT AAAGG ATTCATAG TGAAGGATTTTAACT TERM 3189 3506286 - 3506311 + g 95 -2.5 -6.19302 | overlap 3506290 TTTTAATTCAGATAT GGGAGGATG TCCTAACT CATCCATCC TTTTTTTTATTGTCT Ava_2833 3508940 - 3506499 - | IucA/IucC TERM 3190 3508499 - 3508515 + g 71 -10.1 -2.63715 | GGTGTCCTTCCATTT CCCCTTC TAA GGAGGGG TAGTCTAAGGTCAGT TERM 3191 3508982 - 3509016 + r 100 -13.6 -3.08314 | opp_overlap 3508988, overlap 3508982 3508987 3508988 TCTGGATAACCCCTC TCCAAACCTCTCTCCG TGT CGGGGAGAGGCTTTGA ATTTTCCCCCTTCCC TERM 3192 3508982 - 3509017 + r 93 -12 -4.1466 | gap 1, opp_overlap 3508988, overlap 3508982 3508987 3508988 TCTGGATAACCCCTC TCCAAA-CCTCTCTCCG TGT CGGGGAGAGGCTTTGAA TTTTCCCCCTTCCCT TERM 3193 3508987 - 3509011 + r 93 -12.1 -3.92659 | opp_overlap 3508988, overlap 3508982 3508982 3508988 ATAACCCCTCTCCAA ACCTCTCTCCG TGT CGGGGAGAGGC TTTGAATTTTCCCCC TERM 3194 3508988 - 3509010 + r 100 -15.6 -2.95113 | opp_overlap 3508988, overlap 3508987 3508982 3508982 TAACCCCTCTCCAAA CCTCTCTCCG TGT CGGGGAGAGG CTTTGAATTTTCCCC TERM 3195 3509010 - 3508988 - R 100 -13.4 -3.53761 | opp_overlap 3508987 3508982 3508982 3508988 TAACCCCTCTCCAAA CCTCTCTCCG TGT CGGGGAGAGG CTTTGAATTTTCCCC TERM 3196 3509095 - 3509115 + r 86 -9.7 -4.04295 | opp_overlap 3509096, overlap 3509096 3509110 TTTTGATCCCCCTAA ATCCCCCTT AAA AAGGGGGAC TTTGATTCTAGTTCC TERM 3197 3509114 - 3509096 - R 100 -13.2 -3.54424 | opp_overlap 3509095 3509096 3509110 TTTGATCCCCCTAAA TCCCCCTT AAA AAGGGGGA CTTTGATTCTAGTTC TERM 3198 3509096 - 3509114 + r 93 -13.2 -3.01854 | opp_overlap 3509096, overlap 3509095 3509110 TTTGATCCCCCTAAA TCCCCCTT AAA AAGGGGGA CTTTGATTCTAGTTC Ava_2834 3510503 - 3509286 - | major facilitator transporter TERM 3199 3510104 - 3510116 + g 71 -3.3 -5.06414 | CTTGGTATGTGCCGG CGATC GCA GTTCG TTTTTCTTCCCCACC Ava_2835 3511783 - 3510500 - | monooxygenase TERM 3200 3511750 - 3511740 - G 71 -4.6 -4.59424 | AAACCTAAATTAAAA GGCC CAA GACC AATACCAATCAAGTC Ava_2836 3512358 - 3511780 - | hypothetical protein TERM 3201 3511988 - 3511966 - G 75 -3.4 -5.22039 | overlap 3511968 3511985 TTCAAATTGAAAAAA TACCATCGCC CGC AACAATGGCA AAGCATAACCTTTAC Ava_2837 3514250 - 3512430 - | IucA/IucC TERM 3202 3514286 - 3514325 + r 88 -5.7 -5.52384 | gap 1, overlap 3514288 GAAAGTTATTTAATG TTGGGGAGTGAGGAGAGT TGTTC GCTCTCC-CTCTCTCCTA TTTTTTTGCTCACGC TERM 3203 3514288 - 3514323 + r 86 -8.3 -4.40552 | gap 1, overlap 3514286 AAGTTATTTAATGTT GGGGAGTGAGGAGAGT TGTTC GCTCTCC-CTCTCTCC TATTTTTTTGCTCAC Ava_2838 3515939 - 3514371 - | aromatic amino acid beta-eliminating lyase/threonine aldolase TERM 3204 3515576 - 3515556 - G 73 -9.9 -2.98169 | CCAAGAATCCAGAGA TTGATTAGT CCC ACTAATCAA CACCTCAGCCGCCAC Ava_2839 3517420 - 3515939 - | diaminobutyrate--2-oxoglutarate aminotransferase TERM 3205 3518445 - 3518408 - g 93 -10.7 -4.20531 | gap 1, opp_overlap 3518411 3518413, overlap 3518411 CACATTCAGCCAAAA TAACC-CAGTCACAGGCG TAA CTACTGTGACTGTGGTTA ATCAAAATGACAATA TERM 3206 3518441 - 3518411 - g 79 -8.2 -4.22214 | opp_overlap 3518411 3518413, overlap 3518408 ATTCAGCCAAAATAA CCCAGTCACAGGCG TAA CTACTGTGACTGTG GTTAATCAAAATGAC TERM 3207 3518413 - 3518439 + G 70 -9.4 -2.78216 | opp_overlap 3518411 3518408, overlap 3518411 TCAGCCAAAATAACC CAGTCACAGGCG TAA CTACTGTGACTG TGGTTAATCAAAATG TERM 3208 3519594 - 3519574 - g 71 -6.9 -4.12532 | GCTTGCAGATAGAAA CACCTTTAT TTA ATCAAGGTG CAGCCAAACTACTTT Ava_2840 3518094 - 3520643 + | TonB-dependent siderophore receptor TERM 3209 3520730 - 3520710 - f 86 -5.4 -5.27938 | opp_overlap 3520710, overlap 3520704 ACTCCCAAATAAAAA CCCCAC GGGTGCAGT GTGGGG TTTATAAAGTTAGAA Ava_2841 3521196 - 3521528 + | hypothetical protein Ava_2842 3521929 - 3521600 - | hypothetical protein TERM 3210 3521645 - 3521682 + g 100 -16.5 -4.3208 | gap 1, opp_overlap 3521655, overlap 3521647 TGCTTCTAGTGTATC CTGTGCAAGAGGTG-TCA AGA TGAACACCTCTTGCACTG TTTTGCCTTGTCGGG TERM 3211 3521647 - 3521680 + g 100 -17.7 -3.76167 | gap 1, opp_overlap 3521655, overlap 3521645 CTTCTAGTGTATCCT GTGCAAGAGGTG-TCA AGA TGAACACCTCTTGCAC TGTTTTGCCTTGTCG clpS 3522261 - 3521935 - | ATP-dependent Clp protease adaptor Ava_2844 3524494 - 3522416 - | hypothetical protein TERM 3212 3522601 - 3522579 - G 80 -9 -4.05446 | TTTTTTAAGGAGAAA GCGGCTACAG TTC CCGCCGCCGC ACCAGCAGACCACTC Ava_2845 3531007 - 3525203 - | Serine/threonine protein kinase and Signal transduction histidine kinase (STHK) with GAF and PAS/PAC sensor TERM 3213 3526720 - 3526708 - G 77 -6.3 -4.67982 | TTGCATCCAACAAAA CAACA GTG TGTTG ACTATGCTTGACTTT TERM 3214 3527130 - 3527140 + g 74 -6.8 -4.27192 | CGTCTTTCTAAATCG GCGA CTT TCGC TTTTGCTCCCCATTT TERM 3215 3528841 - 3528874 + g 71 -3.3 -4.99435 | gap 1 GAGATAAATTTTGCC GTAGTAATTC-TCCAA TTT TTAGATGAGTTACTGC TTTTTGATTATTAGG TERM 3216 3530745 - 3530715 - G 91 -6.8 -5.43866 | opp_overlap 3530717 3530719, overlap 3530717 3530719 TAATTCTTAAAAAAA TAGTCCTTGAGGGA AAT TCCCCCAAAGTCTT CCATTACCAAGATAT TERM 3217 3530743 - 3530717 - G 88 -9.4 -4.35085 | opp_overlap 3530717 3530719, overlap 3530715 3530719 ATTCTTAAAAAAATA GTCCTTGAGGGA AAT TCCCCCAAAGTC TTCCATTACCAAGAT TERM 3218 3530741 - 3530719 - G 73 -10.6 -2.51257 | opp_overlap 3530717 3530719, overlap 3530717 3530715 TCTTAAAAAAATAGT CCTTGAGGGA AAT TCCCCCAAAG TCTTCCATTACCAAG Ava_2846 3533943 - 3531115 - | hypothetical protein TERM 3219 3532555 - 3532594 + g 100 -25.2 -3.29096 | gap 1, opp_overlap 3532560, overlap 3532561 GCGTAGCGTCCCGTA GGGAAGTTCGCCCGGAGGG AAA CCCTCCGGGCGA-CTTCTC TTCCTGCTTCCTGCC TERM 3220 3532589 - 3532560 - G 100 -20.1 -3.05384 | gap 1, opp_overlap 3532555 3532561 GCGTCCCGTAGGGAA GTTCGCCCGGAGGG AAA CCCTCCGGGCGA-C TTCTCTTCCTGCTTC TERM 3221 3532561 - 3532589 + g 100 -20.3 -3.73813 | opp_overlap 3532560, overlap 3532555 CGTCCCGTAGGGAAG TTCGCCCGGAGGG AAA CCCTCCGGGCGAC TTCTCTTCCTGCTTC TERM 3222 3533798 - 3533752 - G 81 -9.5 -3.83169 | GACAAACTCACGAAA TCGCCGAAAATCTTCCTGTGG TTTCT CCCCAAGATTATTTTCGGCAA CAGTTAAGTTTTCTA TERM 3223 3535034 - 3535009 - R 88 -10.5 -3.89524 | overlap 3535011 ATTCTATGTCATAAA TACCCGACTTT TTGA AAAGTCGGGGA TCTGAACGTCCGCAG TERM 3224 3535032 - 3535011 - R 100 -13.1 -3.53733 | overlap 3535009 TCTATGTCATAAATA CCCGACTTT TTGA AAAGTCGGG GATCTGAACGTCCGC TERM 3225 3535130 - 3535142 + r 73 -3.4 -5.07486 | opp_overlap 3535130 AAAGTATTCACATAA CTAG TTAAT CTAG TTTTTCTTCGCAATA TERM 3226 3535242 - 3535219 - R 70 -6.7 -4.08064 | opp_overlap 3535219 3535219 AACTCCTCTGCAAAA CCCTACGTC TAGACG GACGCAAGG GTTTCATTTTTAAAT TERM 3227 3535485 - 3535534 + r 100 -15.9 -2.72829 | gap 1, opp_overlap 3535498 3535516 3535517, overlap 3535498 3535517 TTGATCCCCCCTAGC CCCCCTTAAAAAGGGGGGAAAATG AAT CAAAGT-CCCCCTTTTTAAGGGGG ATTTAGGGGGATCTA TERM 3228 3535536 - 3535516 - R 86 -9.7 -4.07675 | opp_overlap 3535498 3535485 3535517, overlap 3535498 3535517 GGAAAATGAATCAAA GTCCCCCTT TTT AAGGGGGAT TTAGGGGGATCTAAA TERM 3229 3535517 - 3535535 + r 100 -13.2 -3.55071 | opp_overlap 3535498 3535516 3535517, overlap 3535498 3535485 GAAAATGAATCAAAG TCCCCCTT TTT AAGGGGGA TTTAGGGGGATCTAA TERM 3230 3535535 - 3535517 - R 93 -13.2 -3.0352 | opp_overlap 3535498 3535485 3535517, overlap 3535498 3535516 GAAAATGAATCAAAG TCCCCCTT TTT AAGGGGGA TTTAGGGGGATCTAA Ava_2847 3535970 - 3535638 - | hypothetical protein Ava_2848 3536356 - 3535970 - | hypothetical protein TERM 3231 3536432 - 3536419 - H 76 -3.1 -5.39755 | TATAACGATAAAAAA TTGAG TATT CCCAA GCTATTTATCTGGAA Ava_2849 3536587 - 3538011 + | hypothetical protein TERM 3232 3538057 - 3538039 - T 100 -14.6 -3.63394 | overlap 3538033 AATAAAATATGACAA GCGTAGGC CTA GCCTACGC CCAAACTTACTTACC Ava_2850 3538369 - 3538064 - | hypothetical protein Ava_2851 3540710 - 3538677 - | WD-40 repeat-containing serine/threonin protein kinase TERM 3233 3540640 - 3540620 - G 91 -10.5 -4.10429 | AACGATTCCTCAAAA GCGGTACTA AGG TAGTACCAC AACTTTGACACGACT Ava_2852 3541772 - 3541014 - | ABC transporter-like TERM 3234 3542209 - 3542189 - g 100 -15.5 -3.97368 | opp_overlap 3542183 TTGGCAATTTACAAA CGGCTGCTA CCT TAGCAGCCG CAGGGATTCATCAAG Ava_2853 3542038 - 3543723 + | TrkA-N Ava_2854 3546448 - 3543941 - | DNA topoisomerase IV subunit A TERM 3235 3544966 - 3544984 + g 70 -5.2 -4.54727 | overlap 3544968 TAGCGCCTAACTTTG TGCGTCGA GGA TCGCCGTA TTTTCGTTTGAGCGA Ava_2855 3546675 - 3547079 + | response regulator receiver domain-containing protein TERM 3236 3547097 - 3547140 + T 90 -9 -4.50976 | opp_overlap 3547104 3547123, overlap 3547099 GCTTTATAAATTTTT TCAGGAACCATCACTCAA AAAAAAGA TTGGGTGATGGTTCCCAA TTTTATAGTATAAAC TERM 3237 3547099 - 3547138 + T 80 -11.6 -2.5758 | opp_overlap 3547104 3547123, overlap 3547097 TTTATAAATTTTTTC AGGAACCATCACTCAA AAAAAAGA TTGGGTGATGGTTCCC AATTTTATAGTATAA TERM 3238 3547468 - 3547444 - T 72 -8.5 -3.55815 | opp_overlap 3547435 3547445, overlap 3547445 AAATAGGGTTTTAAA GCCTCTCTCCT TGC AGGGGAGAGGT TTGGAGAGGGGTTTT TERM 3239 3547467 - 3547445 - T 83 -12 -2.73007 | opp_overlap 3547435 3547445, overlap 3547444 AATAGGGTTTTAAAG CCTCTCTCCT TGC AGGGGAGAGG TTTGGAGAGGGGTTT TERM 3240 3547445 - 3547467 + T 100 -14.2 -3.5394 | opp_overlap 3547445 3547444, overlap 3547435 AATAGGGTTTTAAAG CCTCTCTCCT TGC AGGGGAGAGG TTTGGAGAGGGGTTT Ava_2856 3548491 - 3547598 - | TPR repeat-containing protein TERM 3241 3547828 - 3547801 - G 70 -9.2 -2.87132 | opp_overlap 3547794 3547804, overlap 3547803 CGCCTTTGGTATACA GAGCCACTGCTA GAGC TAGCAATGGTTC TGCGGCTTGTTTATC Ava_2857 3549164 - 3549526 + | hypothetical protein TERM 3242 3549588 - 3549555 - f 76 -9.8 -2.9665 | opp_overlap 3549556 3549563, overlap 3549554 3549558 TTAAAGTCTAGAAAC CTACAGAACTAGTA TTGATT TACTAGTTCTGTAT TAAATTTTTTAACAA TERM 3243 3549556 - 3549587 + F 100 -13.3 -3.52177 | opp_overlap 3549555 3549554 3549558, overlap 3549563 TAAAGTCTAGAAACC TACAGAACTAGTA TTGATT TACTAGTTCTGTA TTAAATTTTTTAACA TERM 3244 3549585 - 3549558 - f 81 -11.5 -2.71097 | opp_overlap 3549556 3549563, overlap 3549555 3549554 AAGTCTAGAAACCTA CAGAACTAGTA TTGATT TACTAGTTCTG TATTAAATTTTTTAA TERM 3245 3550420 - 3550409 - g 72 -7.2 -4.07568 | overlap 3550410 TTGGCGCTGCTAAAA GCGG GGAA CCGC CGAGAAGATATTGAT Ava_2858 3549614 - 3551167 + | secretion protein HlyD Ava_2859 3551239 - 3552510 + | hypothetical protein Ava_2860 3552536 - 3553210 + | ABC transporter-like TERM 3246 3553329 - 3553317 - f 73 -9.1 -3.40403 | TTGCCTGTACTAGAA GGGCT AGA AGCCC ATCCCATAAGAGAAC Ava_2861 3553608 - 3555077 + | secretion protein HlyD TERM 3247 3556182 - 3556218 + G 71 -3 -5.05153 | gap 1, overlap 3556179 3556182 3556182 3556185 CCATTTCTCCTGTAG CC-ATTGCCACAGCAGT GGGT ATTTCTGGGGCGATCGG TTTATTTTTTGGCGT Ava_2862 3555074 - 3556291 + | hypothetical protein TERM 3248 3556348 - 3556331 - T 100 -7.7 -5.4505 | opp_overlap 3556331 TTCGGCAATAAAAAA TGCCTGC ATAT GCAGACA TTTATGAGGCTTTCT TERM 3249 3556715 - 3556739 + T 91 -9.4 -4.4959 | gap 1, opp_overlap 3556714 TGGTCAGGTTAATAG CCCCAGAAACT TCCC AGTT-CTGGGG TTTTACTTCGTTCAC Ava_2863 3558596 - 3556872 - | precorrin-3 methyltransferase TERM 3250 3557538 - 3557563 + g 73 -9.9 -2.93991 | gap 1, opp_overlap 3557522 3557519 3557518 3557540 3557544, overlap 3557519 3557540 3557544 ATAGGTTTTGTAACC TAC-CAAGTCAG TTG CTGACTTGAGTA TGTCCTTGACTTCCG TERM 3251 3557560 - 3557540 - G 73 -10.5 -2.52543 | opp_overlap 3557519 3557538 3557540 3557544, overlap 3557522 3557519 3557518 3557544 AGGTTTTGTAACCTA CCAAGTCAG TTG CTGACTTGA GTATGTCCTTGACTT Ava_2864 3559632 - 3558673 - | transcriptional regulator Ava_2865 3560518 - 3559814 - | precorrin-2 C20-methyltransferase / cobalt-factor II C20-methyltransferase Ava_2866 3562719 - 3560521 - | precorrin-8X methylmutase TERM 3252 3560621 - 3560634 + g 70 -5.9 -4.4078 | ATATTACGGCTATCT GCTGC CAAT GCGGC TTTTGATTCAGCCGC TERM 3253 3560945 - 3560934 - G 75 -5.8 -4.63007 | GACAATCACACAAAA TCGG TGCG CCGA CTGCTAGTGCTGCCC TERM 3254 3561881 - 3561920 + g 89 -12.2 -3.28745 | gap 1, opp_overlap 3561861, overlap 3561865 3561877 GGGGAGAAATGCTTT GTCTTCT-CCCCCTTCCCT ACG AGGGAAGGGGGTAGGGGGG TTAGGTTCTTCCCCC TERM 3255 3562940 - 3562905 - R 100 -12 -4.41348 | opp_overlap 3562916, overlap 3562908 GTTGCGTCAAATAAA TGATGTAGAGACGTTG CATA CAACGTCTCTACAGTA CAGAATAAAGTGCAT TERM 3256 3562937 - 3562908 - R 100 -18.1 -3.18452 | opp_overlap 3562916, overlap 3562905 GCGTCAAATAAATGA TGTAGAGACGTTG CATA CAACGTCTCTACA GTACAGAATAAAGTG TERM 3257 3563052 - 3563026 - R 100 -9.6 -5.2189 | opp_overlap 3563024 3563029 TTAATTAGCAAAAAA TAACCGACTTAC TTA ATAAATCGGTTA TCTCAGTTTTTAGCT Ava_2867 3563869 - 3563102 - | hypothetical protein TERM 3258 3563712 - 3563738 + g 72 -8 -3.87994 | opp_overlap 3563712 CTTTTGGTGATAAAA CCTGCAATCCGA GTT TCGGATTGAAAG TTTCTACCCATGACT TERM 3259 3563738 - 3563712 - G 100 -10.2 -4.36914 | opp_overlap 3563712 CTTTTGGTGATAAAA CCTGCAATCCGA GTT TCGGATTGAAAG TTTCTACCCATGACT TERM 3260 3564007 - 3564018 + r 76 -5.8 -4.67563 | opp_overlap 3564007 ACTAAAAGCATTACA CACC AACA GGTG TTTTAGTTTCTGTTG Ava_2868 3564541 - 3564002 - | Ferritin and Dps Ava_2869 3564914 - 3564750 - | hypothetical protein Ava_2870 3566170 - 3564944 - | hypothetical protein Ava_2873 3567959 - 3567804 - | hypothetical protein Ava_2874 3569455 - 3568112 - | oxidoreductase FAD/NAD(P)-binding TERM 3261 3570265 - 3570223 - R 100 -13.2 -4.00532 | gap 1, opp_overlap 3570226, overlap 3570226 CTCCCAAATACTAAA TAATAGGTAATAGGT-GTT TTGAGC AACTACCTATTACCTATTA TCAAAAGCTTATCTT TERM 3262 3570226 - 3570262 + r 80 -10.5 -3.30338 | gap 1, opp_overlap 3570226 3570223 CCAAATACTAAATAA TAGGTAATAGGT-GTT TTGAGC AACTACCTATTACCTA TTATCAAAAGCTTAT TERM 3263 3570262 - 3570226 - R 89 -10.5 -4.12133 | gap 1, opp_overlap 3570226, overlap 3570223 CCAAATACTAAATAA TAGGTAATAGGT-GTT TTGAGC AACTACCTATTACCTA TTATCAAAAGCTTAT Ava_2875 3570672 - 3570313 - | low temperature-induced protein TERM 3264 3570488 - 3570504 + g 74 -6.6 -4.31166 | GGAGGTGCGGATCTG GCAACT TCATC AGTTGC TTTCTGTGTTTCTAA Ava_2876 3571470 - 3571715 + | hypothetical protein Ava_2877 3571696 - 3571986 + | hypothetical protein Ava_2878 3577650 - 3572161 - | hypothetical protein TERM 3265 3574745 - 3574730 - G 71 -3.2 -5.02074 | overlap 3574731 TTATTCGGTAAAAAA CCACTC ACTA GAGCGA TGGGGAACTGTTGAG Ava_2879 3578350 - 3577811 - | hypothetical protein Ava_2880 3579893 - 3578370 - | hypothetical protein Ava_2881 3580611 - 3579919 - | hypothetical protein Ava_2882 3581495 - 3580683 - | hypothetical protein Ava_2883 3582621 - 3581569 - | hypothetical protein TERM 3266 3582190 - 3582161 - G 73 -8.7 -3.452 | gap 1, opp_overlap 3582168 GTTAAAGATTGACAA GGACGAAGTAG-TG AAC CAGCTACTTCTTCC GCAATGCTCATGTTT Ava_2884 3583486 - 3582698 - | hypothetical protein Ava_2885 3586169 - 3583512 - | hypothetical protein TERM 3267 3585324 - 3585335 + g 73 -5.8 -4.56775 | GGCAAATTTATTCGG CCAG CCAC CTGG TTTTTCCAAAAAAGT Ava_2886 3586584 - 3586207 - | hypothetical protein Ava_2887 3587230 - 3586613 - | hypothetical protein Ava_2888 3588846 - 3588073 - | Short-chain dehydrogenase/reductase SDR TERM 3268 3588192 - 3588172 - G 76 -2.5 -5.40072 | opp_overlap 3588188, overlap 3588174 3588175 CGTGGCGCAAAAAAA GATGACATC AGC AACGTCCTC TGGTGTCAGTGGGTT TERM 3269 3588903 - 3588870 - R 78 -10.5 -3.0644 | opp_overlap 3588875 3588877, overlap 3588861 3588877 AGTCAATGGTCAATA GTCAACAGTCAAC AGTCTGTA GTTGACTATTGAC CCACCTACTACTATC Ava_2889 3589738 - 3588914 - | hypothetical protein TERM 3270 3590444 - 3590469 + G 73 -9 -3.56562 | overlap 3590438 3590437 TTAGTGCGTCAAGCG GCTCCAGCTT GGTTTG AGGCTGGGGC TTATGTGGTACATTT Ava_2890 3589823 - 3590896 + | UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase Ava_2891 3596076 - 3590932 - | WD-40 repeat-containing protein TERM 3271 3593032 - 3593045 + g 71 -4.5 -4.63048 | overlap 3593028 TGAACGATTGAGCTT GGCTT GGCT GAGCC TTTGTTGTTTCTGGC TERM 3272 3595716 - 3595704 - G 73 -2.7 -5.09895 | CATTCACCCAAAAAA TCATC GGA AATGA ATGACGTTTGGGAAA TERM 3273 3595815 - 3595800 - G 79 -7.6 -4.35926 | opp_overlap 3595799 3595800 ATTCTAAACCCAAAA CCATCA AGGC TGATGG CTGTTGCTGTTGGGG Ava_2892 3597383 - 3596052 - | hypothetical protein TERM 3274 3596175 - 3596157 - G 70 -3.8 -4.89063 | opp_overlap 3596163, overlap 3596161 GTATTCAAAAACAAA CAAACTCC GCA GAAGTGTG TGGTATTCAATATCA TERM 3275 3596171 - 3596161 - G 71 -3.2 -4.94811 | opp_overlap 3596163, overlap 3596157 TCAAAAACAAACAAA CTCC GCA GAAG TGTGTGGTATTCAAT TERM 3276 3596248 - 3596225 - G 75 -6 -4.63527 | GCACCACTTGAAAAA TTAACTCCCA TTCG TGGGGGTCAA TGGCGTTAGCACGGT Ava_2893 3597575 - 3598399 + | 3-beta hydroxysteroid dehydrogenase/isomerase Ava_2894 3599036 - 3598473 - | cyclase/dehydrase TERM 3277 3599283 - 3599247 - H 100 -13.9 -5.14563 | CTCCTCAGTAAAAAA CCAGATCCCGAACTTCT CCA AGAAGTCCGAAATCTAG ACAACTCGAATTGCA TERM 3278 3599459 - 3599476 + G 80 -4.9 -5.22104 | overlap 3599474 TTGGTATTCTCACCT TTATTCC TGGC GGAGTAA TTTTATTATTTTTTC TERM 3279 3599474 - 3599484 + G 73 -2.6 -5.24129 | overlap 3599459 TTATTCCTGGCGGAG TAAT TTT ATTA TTTTTTCTGGCGGCG Ava_2895 3599356 - 3599550 + | hypothetical protein engA 3599776 - 3601137 + | GTP-binding protein EngA Ava_2897 3601258 - 3602184 + | cobalt transport protein Ava_2898 3602697 - 3602975 + | hypothetical protein TERM 3280 3603024 - 3603068 + G 78 -8.8 -3.7614 | gap 2, overlap 3603022 GGGCTTCCCTACCGC CTTCAGTCAGGCTAATTGCTGT CAC AAAGCAAAT-GCC-GACTGAAG TTATTCGTGCTGCTT Ava_2899 3602972 - 3603640 + | hypothetical protein Ava_2900 3604015 - 3604611 + | hypothetical protein TERM 3281 3604627 - 3604681 + F 80 -10.3 -3.34344 | opp_overlap 3604622 AGTTAAATTAGTCAT TAGTCCATAGTCAAGAGTCCAAATT AGAAA ATTTTTGACTATTGACTATTGACTA TTGATTAACGAATAA TERM 3282 3604737 - 3604770 + G 82 -10.3 -3.61398 | gap 1 TTTGGTTTAATTGGT GGCGGGGTAATGGGAG AAG CGCTC-TTATCCCGCC TTATTGCGCGGGGAA Ava_2901 3604710 - 3605522 + | pyrroline-5-carboxylate reductase TERM 3283 3605753 - 3605773 + G 74 -9.7 -3.22182 | opp_overlap 3605744, overlap 3605751 CAAAAAGATGCGATC GCGTCCC TTAACGC GGGACGC TCTGTTGTCGTGTGT TERM 3284 3608210 - 3608188 - g 79 -8.5 -4.09739 | opp_overlap 3608190 3608193 TGAACTTTGCCAAAA CACCACCTT AGATG AAGGTGATG TAGTGCGAATTTTAC Ava_2902 3605669 - 3608350 + | Type III restriction enzyme, res subunit Ava_2903 3608459 - 3609130 + | hypothetical protein Ava_2904 3609459 - 3610445 + | glycosyl transferase family protein Ava_2905 3610781 - 3611884 + | polysaccharide pyruvyl transferase TERM 3285 3612006 - 3611961 - T 76 -5.8 -4.64598 | gap 3, opp_overlap 3611963, overlap 3611962 3611963 TAATGATCTCAAAAA TGCGACGTAGAGCTGATTCTCAC ATA GT-AGAATCATCTCTACGT-G-A GTCTATCAGTCTGGA TERM 3286 3612005 - 3611963 - T 78 -10.9 -2.62098 | gap 2, opp_overlap 3611963, overlap 3611961 3611962 ATGATCTCAAAAATG CGACGTAGAGCTGATTCTCAC ATA GT-AGAATCATCTCTACGT-G AGTCTATCAGTCTGG Ava_2906 3612282 - 3612028 - | hypothetical protein Ava_2907 3612990 - 3612310 - | acyl-phosphate glycerol-3-phosphate acyltransferase Ava_2908 3615249 - 3613066 - | lipopolysaccharide biosynthesis TERM 3287 3613772 - 3613750 - G 70 -5.6 -4.386 | TAATTTCTCATAAAA CTCTAAATAC AAA GAATCTAGAG AAAGGATGACAGGTA Ava_2909 3616864 - 3615524 - | polysaccharide export protein TERM 3288 3616572 - 3616556 - G 70 -8 -3.64236 | ACTCAAATCTGGAAA GCGTTG GACAA CAACGC TAACTGCATCTCCCG Ava_2910 3617637 - 3616909 - | hypothetical protein Ava_2911 3618869 - 3617949 - | hypothetical protein TERM 3289 3618606 - 3618594 - G 74 -4.1 -4.9138 | ACCAGTCAAATAAAA CACTG CCC CAATG ACGAGTAAAGTTGCT TERM 3290 3619099 - 3619041 - R 77 -10.3 -2.84417 | gap 2, opp_overlap 3619040 3619041 GAACAAACGTAAGTA TCTGTAGGGTGGGCAATGCCCACCATATC CGG GTTTTGCTGGGCAATGCCCACCC--CAGT ACGTATGATTCACAA Ava_2912 3620359 - 3619172 - | DegT/DnrJ/EryC1/StrS aminotransferase TERM 3291 3620484 - 3620507 + H 78 -9.8 -3.34344 | opp_overlap 3620497 CTTTTATGAATTCTG CACTTAAATA AATC TATTTAAGTG TTAATTAGGGAATAG TERM 3292 3620809 - 3620793 - H 95 -7.2 -5.27923 | opp_overlap 3620793 TAAGGTTACAAAAAA GCCGCC ACGAG GACGGC TTTCTTCATATATGG TERM 3293 3621127 - 3621168 + G 73 -3.7 -5.05782 | TGGGTTGATGTTCGG CCCCGATTTAGATATTTAC TCGC GTCAATATCAGCGTTGGGG TTTTTTGCGCTGGAT Ava_2913 3620987 - 3621583 + | hypothetical protein TERM 3294 3622348 - 3622324 - g 100 -9.2 -5.25803 | opp_overlap 3622325, overlap 3622325 AACGGTTACAAAAAA TGGAGGCGGT AGTTG ACCGCCCCCT TTCTGATTACAGTTT TERM 3295 3622347 - 3622325 - g 100 -12.7 -3.74397 | opp_overlap 3622325, overlap 3622324 ACGGTTACAAAAAAT GGAGGCGGT AGTTG ACCGCCCCC TTTCTGATTACAGTT TERM 3296 3622325 - 3622347 + G 89 -10.5 -4.06562 | opp_overlap 3622324 3622325 ACGGTTACAAAAAAT GGAGGCGGT AGTTG ACCGCCCCC TTTCTGATTACAGTT mazG 3621612 - 3622418 + | nucleoside triphosphate pyrophosphohydrolase Ava_2915 3622971 - 3622408 - | hypothetical protein TERM 3297 3623051 - 3623076 + r 100 -9.7 -5.14645 | opp_overlap 3623050 3623049 3623053, overlap 3623053 AATATCTCATAAATT TAGAGGCGGAA AAAT TCCCGCCTCTG TTTTTGTTAAGTTAT TERM 3298 3623053 - 3623074 + r 86 -10.1 -4.18817 | opp_overlap 3623053 3623050 3623049, overlap 3623051 TATCTCATAAATTTA GAGGCGGAA AAAT TCCCGCCTC TGTTTTTGTTAAGTT TERM 3299 3623074 - 3623053 - R 83 -12.3 -2.7083 | opp_overlap 3623051 3623053, overlap 3623050 3623049 TATCTCATAAATTTA GAGGCGGAA AAAT TCCCGCCTC TGTTTTTGTTAAGTT Ava_2916 3623334 - 3623116 - | high light inducible protein Ava_2917 3623508 - 3624230 + | thymidylate synthase complementing protein ThyX TERM 3300 3624268 - 3624288 + F 91 -6.1 -5.50499 | GTGTAATTTTATCGA CCCTCGG CTAGCCA TCGAGGG TTTTTTTAGGTGTAA Ava_2918 3624486 - 3624656 + | hypothetical protein TERM 3301 3624713 - 3624733 + F 88 -5.3 -5.4505 | TACTTCTTCTATAAA CCTCGGTTA GTT TCGCCGGGG TTTTTTGTTGCGCGG TERM 3302 3625570 - 3625586 + G 70 -5.1 -4.41956 | opp_overlap 3625573, overlap 3625573 TGCTTAGGTGAGAAT GAAGGTA AAA TACCTGC TTTTGCTGTCTCTGT Ava_2919 3624841 - 3625818 + | PfkB TERM 3303 3625825 - 3625859 + F 83 -11.4 -3.09933 | opp_overlap 3625818 3625815 3625827 AAAATCTAGCTGAAC TACCCACATCTGACCC GTC GAGTCAGATGTGGGGC TTCCGTCGGTTCAAG TERM 3304 3625857 - 3625827 - f 100 -20.6 -2.7386 | opp_overlap 3625825, overlap 3625818 3625815 AATCTAGCTGAACTA CCCACATCTGACCC GTC GAGTCAGATGTGGG GCTTCCGTCGGTTCA Ava_2920 3626241 - 3626624 + | hypothetical protein Ava_2921 3626704 - 3627417 + | cobalamin (vitamin B12) biosynthesis CbiX protein Ava_2922 3627414 - 3628196 + | uroporphyrin-III C-methyltransferase TERM 3305 3628273 - 3628308 + T 73 -6.2 -4.49556 | opp_overlap 3628284, overlap 3628276 ATGCACTTTATTCTG TACTGTAGAGACGTTG CATA CAACATCTCTACATCA TTTATTTGGTGCAAC TERM 3306 3628276 - 3628305 + T 87 -12.3 -3.20639 | opp_overlap 3628284, overlap 3628273 CACTTTATTCTGTAC TGTAGAGACGTTG CATA CAACATCTCTACA TCATTTATTTGGTGC Ava_2923 3629513 - 3628368 - | response regulator receiver domain-containing protein Ava_2924 3630341 - 3631279 + | ribosomal large subunit pseudouridine synthase D TERM 3307 3631579 - 3631555 - f 72 -8 -3.69216 | opp_overlap 3631554 3631555, overlap 3631553 TTGTTATTTAAAACA CAGACTTTTT TTGAC AAAAAGCCTG CTTTAGCTTTTTTTA Ava_2925 3632020 - 3632538 + | phycobilisome protein Ava_2926 3632613 - 3633101 + | phycobilisome protein Ava_2927 3633249 - 3634085 + | CpcD phycobilisome linker-like TERM 3308 3634091 - 3634133 + F 86 -9.4 -4.35524 | gap 1, opp_overlap 3634090 3634102, overlap 3634092 CCAAGTGTAGAAATG GTTGCT-AGATACCCGACT CCTTCA AGTCGGGTATCTGAGTAAA TTTTAAATTTCGGAG TERM 3309 3634092 - 3634132 + F 90 -12.9 -3.20832 | gap 1, opp_overlap 3634090 3634102, overlap 3634091 CAAGTGTAGAAATGG TTGCT-AGATACCCGACT CCTTCA AGTCGGGTATCTGAGTAA ATTTTAAATTTCGGA TERM 3310 3634121 - 3634102 - f 75 -10 -2.87463 | opp_overlap 3634092 3634091, overlap 3634090 AATGGTTGCTAGATA CCCGACTC CTTC AAGTCGGG TATCTGAGTAAATTT Ava_2928 3634158 - 3634919 + | HEAT repeat-containing PBS lyase Ava_2929 3635012 - 3635653 + | HEAT repeat-containing PBS lyase Ava_2930 3636213 - 3636734 + | phycocyanin, beta subunit Ava_2931 3636824 - 3637315 + | phycocyanin, alpha subunit TERM 3311 3637561 - 3637579 + G 73 -7.3 -4.10429 | opp_overlap 3637560 3637559 GTAGAGTTAGTAATT CGCGCCG TCTAT CGGCACG TTTTGGGCAATGATT Ava_2932 3637453 - 3638313 + | CpcD phycobilisome linker-like Ava_2933 3638444 - 3638686 + | CpcD phycobilisome linker-like Ava_2934 3638700 - 3639530 + | HEAT repeat-containing PBS lyase TERM 3312 3639882 - 3639904 + G 72 -9.8 -2.85583 | overlap 3639881 3639884 TTCGATTCGCACACT CGCGGCGATC GCT GATCCCCGTG CTTTAGATGTATTAA Ava_2935 3639625 - 3640227 + | HEAT repeat-containing PBS lyase TERM 3313 3640207 - 3640227 + F 71 -9.1 -3.22448 | opp_overlap 3640221 GTCCGCGCCCGCATT CTATTGGCT CAA AGTCAATAG TTGAATTGAGTTTCA TERM 3314 3640894 - 3640882 - g 86 -7.7 -4.65916 | GGCACTTTAACAAAA GACGA TAT TCGTC GCGCCATTCCCGCCA Ava_2936 3640264 - 3641103 + | phycobilisome linker polypeptide Ava_2937 3641197 - 3641940 + | phycobilisome linker polypeptide TERM 3315 3642385 - 3642358 - g 84 -2.9 -5.66229 | gap 2 ACGAAGAAGAAAAAA TTGCTTGGTCAAT TCAA ATTG-CCA-GCAA AGGTTGGGGAGGATT Ava_2938 3641979 - 3642692 + | phycobilisome linker polypeptide Ava_2939 3642802 - 3643563 + | phycobilisome linker polypeptide Ava_2940 3644537 - 3643725 - | protein-L-isoaspartate(D-aspartate) O-methyltransferase Ava_2941 3645258 - 3644548 - | hypothetical protein TERM 3316 3644582 - 3644609 + g 70 -9.3 -2.80438 | opp_overlap 3644578, overlap 3644578 3644571 CACCCAATAAATGAT GTAGAGACGTT GCATGG AATGTCTCTAC TCATTAAATGTTTAA TERM 3317 3645979 - 3645968 - g 85 -2.2 -5.83211 | overlap 3645970 TACGAAAAGAAAAAA TGGC CTTC ACCA TTGACTTACTTGGTG Ava_2942 3645529 - 3648510 + | L-proline dehydrogenase / delta-1-pyrroline-5-carboxylate dehydrogenase TERM 3318 3648515 - 3648550 + F 93 -12 -3.93984 | opp_overlap 3648512 3648521 3648523, overlap 3648519 3648547 GAGCAGAATAAGCTA TAAAAATAGGTGGGGC AAAT GCCCTACCTGTGTTTA TTTATAAATAAATTT TERM 3319 3648519 - 3648546 + F 88 -8.4 -4.57482 | opp_overlap 3648512 3648521 3648523, overlap 3648515 AGAATAAGCTATAAA AATAGGTGGGGC AAAT GCCCTACCTGTG TTTATTTATAAATAA TERM 3320 3648544 - 3648521 - f 82 -6.6 -4.94222 | opp_overlap 3648519 3648515, overlap 3648512 3648523 AATAAGCTATAAAAA TAGGTGGGGC AAAT GCCCTACCTG TGTTTATTTATAAAT TERM 3321 3648542 - 3648523 - f 85 -9.2 -4.07789 | opp_overlap 3648519 3648515, overlap 3648521 TAAGCTATAAAAATA GGTGGGGC AAAT GCCCTACC TGTGTTTATTTATAA Ava_2943 3648533 - 3649003 + | GCN5-related N-acetyltransferase Ava_2944 3650790 - 3649069 - | multi-sensor Signal transduction histidine kinase TERM 3322 3649770 - 3649791 + g 85 -9.5 -4.23732 | gap 1, overlap 3649781 GGCTACCAGCTTCGG CTGCG-GCTT GGG AAGCACGCAG TTTCATTTCTGTTTG TERM 3323 3650875 - 3650896 + H 83 -2.3 -5.7946 | ACAATTACGAGATAA GGTTTTACA TATC TGGAAAATC TTTTTTTCTTAAAGG Ava_2945 3651234 - 3652160 + | putative iron transport system substrate-binding protein Ava_2946 3652481 - 3652155 - | hypothetical protein TERM 3324 3652544 - 3652530 - R 76 -4.3 -5.08601 | CCAGTTTAACAAAAA TGAGT CATTC ACTCA GGCATAATTATTGGG Ava_2947 3653697 - 3652615 - | peptidase M4, thermolysin TERM 3325 3653235 - 3653251 + g 74 -6.5 -4.49756 | CATAAACCATCTGGT CGCCATT CCA AAAGGCG TTTTCATATTTAACA Ava_2948 3654664 - 3654209 - | hypothetical protein TERM 3326 3654864 - 3654829 - R 93 -12 -4.20516 | opp_overlap 3654840, overlap 3654832 GTTGCACCGAATAAA TGATGTAGAGACGTTG CGTG CAACGTCTCTACAGTA CAGAATAAAGTGCAT TERM 3327 3654861 - 3654832 - R 100 -18.1 -3.11702 | opp_overlap 3654840, overlap 3654829 GCACCGAATAAATGA TGTAGAGACGTTG CGTG CAACGTCTCTACA GTACAGAATAAAGTG TERM 3328 3654987 - 3655007 + r 70 -5.5 -4.42653 | TCTAAACTACTGCTG TTGTTGCTT TCA AAGCAAAAA TTTTCTCAATCACAT Ava_2949 3656181 - 3654973 - | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase TERM 3329 3655083 - 3655093 + g 82 -6.8 -4.80656 | CAACAATTTTTCCTG CTGG TAA CCAG TTTTCTGTTGTTACT TERM 3330 3655654 - 3655665 + g 84 -3.6 -5.4588 | GCCATGAATAATTGA GGTG TGAT CGCC TTTTTTGTGCTTTTC TERM 3331 3656809 - 3656825 + G 81 -11.5 -2.84919 | overlap 3656809 CTGGATACTTACGAT GCGGCGG CGA TCGCCGC TACTTATGGCTCGAT Ava_2950 3656521 - 3657489 + | hypothetical protein Ava_2951 3657494 - 3657805 + | nitrogen regulatory protein P-II (GlnB, GlnK) Ava_2952 3659035 - 3657836 - | N-acetylglucosamine 6-phosphate deacetylase Ava_2953 3659166 - 3659693 + | phosphoribosylaminoimidazole carboxylase catalytic subunit TERM 3332 3659945 - 3659930 - f 91 -4.8 -5.95539 | GTTTAAACAAAAAAA TGTATT AACC AATACA GAATTAATGTTTAGG Ava_2954 3660210 - 3661676 + | ammonium transporter TERM 3333 3662466 - 3662476 + G 73 -5.4 -4.58395 | overlap 3662470 ATCGTCTTCGCCTTG GCAA CCG TTGC TTTTTGGGCAATCGG TERM 3334 3662524 - 3662539 + G 90 -4 -5.71712 | overlap 3662525 GTGATGGTAATGATT TCATTG GCTT CAATGG TTTTTTTCTCTCAGG TERM 3335 3663401 - 3663387 - g 71 -10 -2.72344 | opp_overlap 3663387 3663386 3663385 TGGTATGGTGAAGGA CTTGGC CCA GCCAAG GGTTTGTTTGCTGGT TERM 3336 3663387 - 3663401 + G 71 -10 -2.57471 | opp_overlap 3663387, overlap 3663386 3663385 TGGTATGGTGAAGGA CTTGGC CCA GCCAAG GGTTTGTTTGCTGGT Ava_2955 3662100 - 3663656 + | ammonium transporter TERM 3337 3663704 - 3663726 + F 100 -10.6 -5.58454 | TCTATAGTCCATGAC CCCGGTTTCT CGT GGAAATCGGG TTTTTTTCATCTAGA TERM 3338 3665020 - 3665032 + G 74 -4.1 -5.02357 | CGTCAATTTTGATAG GTTGT ATC ACAGC TTTTGTTTGCTTCTA Ava_2956 3663990 - 3665402 + | ammonium transporter TERM 3339 3665422 - 3665406 - f 81 -7.3 -4.62336 | opp_overlap 3665406 ATCGTACCGTAAAAA TTTAGGC ATA GCCCAAA TTTGACAACTGACTA TERM 3340 3665760 - 3665789 + G 78 -9.3 -3.58869 | opp_overlap 3665760 3665759 3665758 CGCTGCCGAAAAACG TCCCCAGCGCTTA AGCA TAATGGCTGGGGA TTCTCTAAGTTTGTG Ava_2957 3665494 - 3666321 + | lipolytic protein Ava_2958 3667180 - 3666461 - | phytochelatin synthase Ava_2959 3668119 - 3667211 - | substrate-binding region of ABC-type glycine betaine transport system TERM 3341 3668015 - 3668032 + g 72 -9.9 -2.74937 | overlap 3668014 3668011 CGTAAAGTCTTTTGA GGCGATA ATAA TATCGCC ATTAGTTGTATTTGT Ava_2960 3668795 - 3668163 - | binding-protein dependent transport system inner membrane protein Ava_2961 3669659 - 3668895 - | ABC transporter-like TERM 3342 3669962 - 3669939 - R 86 -6.7 -5.16237 | AATCTCAGTAAAAAA CGCACCG TGTTATGTGG CGGTGCG TGATAACAAAGCTAA Ava_2962 3671681 - 3669987 - | hypothetical protein TERM 3343 3671113 - 3671099 - G 73 -2.8 -5.23316 | CACTATAGTAAAAAA TGCTAG ATA CTATCA AAACTCCATAAAAAC Ava_2963 3672672 - 3671722 - | ABC transporter-like TERM 3344 3673051 - 3673040 - H 86 -4.4 -5.60689 | opp_overlap 3673040 TGAGAGAATAAAAAA GCAA ACAC TTGC TTTATGGTGTAAATA TERM 3345 3673631 - 3673641 + G 71 -4.6 -4.62168 | overlap 3673633 TACAGACCGATTCCC GCCG CAA TGGC TTTTATGCTTTGCGT Ava_2964 3673294 - 3674925 + | hypothetical protein TERM 3346 3674963 - 3674974 + F 86 -4.4 -5.67063 | AGTTGATGTCCAGAT GTTG GATA CAAC TTTTTTTCTAATGAC Ava_2965 3675528 - 3676409 + | Short-chain dehydrogenase/reductase SDR TERM 3347 3676435 - 3676459 + F 89 -7.9 -5.0133 | opp_overlap 3676435 TAATTATTTCCCAAA TTCCCTCAGTT ACA AGCTGATGGAA TTTTTTGGCGACATC TERM 3348 3676935 - 3676950 + G 72 -6.2 -4.37886 | CCCCGTGTGATGTTG GATTAC TCTG GTAATC TTTTGTGGGGACTCC Ava_2966 3676581 - 3678068 + | hypothetical protein TERM 3349 3678199 - 3678154 - f 88 -4.7 -5.76633 | gap 1, opp_overlap 3678153, overlap 3678158 TGAGAGACAAAAAAA TTTAGC-CGTAACGCACCATCT GTG AGGCGGTGCGTTAGGCGCGAGA ATAGTTATTTTGTAA TERM 3350 3678193 - 3678158 - f 93 -13.4 -3.03441 | gap 1, opp_overlap 3678153, overlap 3678154 AGACAAAAAAATTTA GCCGTAACGCACCATCT GTG AGGCGGTGCGTTA-GGC GCGAGAATAGTTATT Ava_2967 3678356 - 3680425 + | hypothetical protein TERM 3351 3680501 - 3680525 + F 72 -9.3 -2.72511 | opp_overlap 3680489 3680503, overlap 3680500 ATACTGTTGGCGAAT TATTGAGGGGT TAA GCCCCTCAAGA GTTTGGAACAGTGGA TERM 3352 3680523 - 3680503 - f 78 -11.2 -2.71011 | opp_overlap 3680501 3680500, overlap 3680489 ACTGTTGGCGAATTA TTGAGGGG TTAAG CCCCTCAA GAGTTTGGAACAGTG Ava_2968 3680670 - 3681488 + | hypothetical protein TERM 3353 3681714 - 3681701 - g 74 -6.7 -4.3129 | opp_overlap 3681701 GATTTAGTAGGAAAA GTTCC CCCC GGAAC TAGTTGGCAAGCAAC Ava_2969 3681566 - 3682237 + | transposase Ava_2970 3682644 - 3682384 - | hypothetical protein Ava_2971 3686830 - 3682727 - | WD-40 repeat-containing protein TERM 3354 3683456 - 3683466 + g 76 -6.8 -4.46212 | ACCCTGTAAGTCCCA CAGC CGC GCTG TTTTGTCATCGGAGG Ava_2972 3688596 - 3686983 - | hypothetical protein TERM 3355 3688415 - 3688403 - G 71 -3.3 -4.93296 | opp_overlap 3688403, overlap 3688404 CCATGACCAGAAAAA TGCAC AAT GTGCG GTTCATAGTCTAAAA TERM 3356 3688441 - 3688431 - G 79 -8.2 -4.16943 | overlap 3688432 GTTCATAGTCTAAAA GCGC CCT GCGC AAATCTTCAGGACGC TERM 3357 3689164 - 3689150 - g 73 -5.7 -4.4727 | opp_overlap 3689150 TCAAGACTCACAAAA TACCG CTTAT CGGTA TAGTATTATCAAAAA TERM 3358 3689310 - 3689300 - g 71 -3.2 -4.93296 | TGACGATTATAAAAA GGCT CGT AACC TTTCTCGCAATCTTT Ava_2973 3688881 - 3689759 + | hypothetical protein TERM 3359 3689956 - 3690014 + F 100 -32 -2.75238 | overlap 3689955 3689957 3689983 ATAGCTTTAAAGTGT CTGTAGGGTGGGCAATGCCCACCGTATC ATG GTTGTGGTGGGCATTGCCCACCCTACAC GTATTTCTAATAATT TERM 3360 3689957 - 3690015 + F 100 -23.5 -3.59935 | gap 2, overlap 3689955 3689956 3689983 TAGCTTTAAAGTGTC --TGTAGGGTGGGCAATGCCCACCGTATC ATG GTTGTGGTGGGCATTGCCCACCCTACACG TATTTCTAATAATTA TERM 3361 3690614 - 3690601 - g 70 -5.9 -4.3898 | ATTACGTGCAGAAAA GAGCG ATCG CGCCC AAATTCAAGCTGATT Ava_2975 3690422 - 3692572 + | TPR repeat-containing protein Ava_2976 3692805 - 3692602 - | hypothetical protein TERM 3362 3693070 - 3693060 - g 70 -5.4 -4.50241 | opp_overlap 3693060, overlap 3693050 3693054 AAATATGAACCAAAA CTTG CCT CAAG ATTTAGACAGAGAAA TERM 3363 3693335 - 3693319 - g 70 -3.6 -4.89063 | CCACCGAAAAAGAAA CCAGGT GGGCA ACCAGG ACATCAAGGTAAAAC TERM 3364 3693470 - 3693457 - g 71 -2.3 -5.09245 | overlap 3693459 GTAAAAGTAGAAAAA CACGC GGTA GCGCA ACTAGTAGAATGTCC Ava_2977 3693049 - 3694521 + | transposase IS66 TERM 3365 3694912 - 3694900 - T 70 -5.5 -4.46212 | TTGTTTACCACAAAA GCGGT AAG ACCAC AAATTAATTATTTAT Ava_2978 3696321 - 3694924 - | hypothetical protein Ava_2979 3696445 - 3696966 + | GCN5-related N-acetyltransferase TERM 3366 3696992 - 3696972 - T 89 -11.2 -3.91084 | CCATGTTTAAGTAAA TAGGTGGG TAATG CCCACCTA AGAGAACATTAACCC Ava_2980 3697402 - 3697001 - | Beta-Ig-H3/fasciclin TERM 3367 3697442 - 3697456 + H 71 -4.4 -4.83169 | opp_overlap 3697442 GAATTTTAAATTATA TTAAAA CTG TTTTAA TTTTTATCACAAAGT Ava_2981 3697566 - 3698525 + | 2-dehydropantoate 2-reductase TERM 3368 3699658 - 3699672 + G 73 -5.7 -4.41114 | TAGCGATCGCGGTAA GGTTC CTGTC GAACC TTTATTATCTACTCA TERM 3369 3699779 - 3699748 - g 70 -3.6 -4.91109 | overlap 3699750 TCTTGACGAGAAAAA TAGCCCAGAGTTTG TTCC CCAACGCTGGACAA AGGTTTATCGTGACT TERM 3370 3700374 - 3700364 - g 71 -3.2 -5.06451 | overlap 3700370 3700371 TATGACCGTAAAAAA GATG AAT CACC CTCGGTGGAAGCATC TERM 3371 3701098 - 3701080 - g 84 -5.2 -5.25803 | overlap 3701084 AACGGTGACAAAAAA GAAACCCC AAA GGGGCTTA AAAACTATCGGCTTA TERM 3372 3701094 - 3701084 - g 100 -8.2 -5.13354 | overlap 3701080 GTGACAAAAAAGAAA CCCC AAA GGGG CTTAAAAACTATCGG valS 3698600 - 3701608 + | valyl-tRNA synthetase TERM 3373 3701673 - 3701642 - f 70 -9 -3.05343 | gap 1, opp_overlap 3701642 GGCATATTTGCAAGA GGTAATGAGA-AATT TAT AACTATCTCATTACC TTTTGCAAAGTCAAA TERM 3374 3701642 - 3701673 + F 73 -7.4 -4.09685 | opp_overlap 3701642 GGCATATTTGCAAGA GGTAATGAGAAATT TATA ACTATCTCATTACC TTTTGCAAAGTCAAA Ava_2983 3701760 - 3702203 + | hypothetical protein Ava_2984 3702420 - 3704051 + | hypothetical protein Ava_2985 3704880 - 3704071 - | type 4 prepilin peptidase 1. Aspartic peptidase. MEROPS family A24A Ava_2986 3705245 - 3704979 - | hypothetical protein Ava_2987 3706422 - 3705334 - | 3-isopropylmalate dehydrogenase Ava_2988 3707250 - 3706528 - | hypothetical protein TERM 3375 3707587 - 3707557 - H 86 -8.5 -4.43879 | opp_overlap 3707557 AGCATTCAAGCAAAA TGAGAAAGTAAAA TGCCT TTTTGCTTTCTCA TTTCAGTAGATCGCG TERM 3376 3707557 - 3707587 + H 86 -10.7 -3.6682 | opp_overlap 3707557 AGCATTCAAGCAAAA TGAGAAAGTAAAA TGCCT TTTTGCTTTCTCA TTTCAGTAGATCGCG Ava_2989 3707882 - 3708904 + | Serine/threonine protein kinase Ava_2990 3708967 - 3710295 + | Serine/threonine protein kinase TERM 3377 3710505 - 3710488 - f 85 -4.1 -5.65496 | opp_overlap 3710488, overlap 3710490 CAGTAAAAATAAAAA CATCACT CTAT AGTGAGG TGGATTATGGGAAAA TERM 3378 3710503 - 3710490 - f 70 -5.3 -4.43511 | opp_overlap 3710488, overlap 3710488 GTAAAAATAAAAACA TCACT CTAT AGTGA GGTGGATTATGGGAA Ava_2991 3710512 - 3710745 + | hypothetical protein TERM 3379 3710770 - 3710812 + T 93 -12.3 -3.85704 | gap 1, opp_overlap 3710774, overlap 3710772 3710773 GATCGCCATTTCCCA TAA-ACTTGTAGAGACGTTG CACG CAACGTCTCTACAGGAATTA TTTGGTGATTGGTAA TERM 3380 3710772 - 3710809 + T 93 -12.1 -4.04927 | opp_overlap 3710774, overlap 3710770 3710773 TCGCCATTTCCCATA AACTTGTAGAGACGTTG CACG CAACGTCTCTACAGGAA TTATTTGGTGATTGG TERM 3381 3710773 - 3710808 + T 100 -15.6 -3.02233 | opp_overlap 3710774, overlap 3710772 3710770 CGCCATTTCCCATAA ACTTGTAGAGACGTTG CACG CAACGTCTCTACAGGA ATTATTTGGTGATTG TERM 3382 3710807 - 3710774 - T 100 -16.9 -3.86897 | opp_overlap 3710773 3710772 3710770 GCCATTTCCCATAAA CTTGTAGAGACGTTG CACG CAACGTCTCTACAGG AATTATTTGGTGATT Ava_2992 3711926 - 3710853 - | methylenetetrahydrofolate reductase TERM 3383 3711121 - 3711132 + g 78 -5.8 -4.82901 | AACAGAAAAATTCCT GCCA AAAC TGGC TTTTTATGAACAGAA Ava_2993 3712954 - 3711947 - | tryptophanyl-tRNA synthetase TERM 3384 3713952 - 3713974 + G 91 -7.8 -4.78149 | opp_overlap 3713951 TTGCCCGGATTGAAT GCCATTATTT TAT AAATAAAGGC TTTTTAAATTCTGAC Ava_2994 3713261 - 3714211 + | prolyl aminopeptidase TERM 3385 3714784 - 3714765 - g 85 -4.2 -5.56264 | gap 1, overlap 3714766 CTTAAATATAAAAAA GGGCGCATC AGT GA-GCGCCG CTTAGAATTAATCAA TERM 3386 3714783 - 3714766 - g 74 -7.7 -3.92132 | gap 1, overlap 3714765 TTAAATATAAAAAAG GGCGCATC AGT GA-GCGCC GCTTAGAATTAATCA Ava_2995 3714309 - 3715049 + | hypothetical protein Ava_2996 3717633 - 3715069 - | Alpha-glucan phosphorylase TERM 3387 3717863 - 3717894 + r 83 -12.4 -2.70932 | opp_overlap 3717858 3717855, overlap 3717865 TTAAAGATTATCTTA GATCCCCGACTTCT TTGA AAAAGTTGGGGATC TAATTAGCACCAAGG TERM 3388 3717865 - 3717892 + r 73 -9.2 -2.90075 | opp_overlap 3717858 3717855, overlap 3717863 AAAGATTATCTTAGA TCCCCGACTTCT TTGA AAAAGTTGGGGA TCTAATTAGCACCAA Ava_2997 3718220 - 3717894 - | hypothetical protein Ava_2998 3718369 - 3718211 - | hypothetical protein TERM 3389 3718385 - 3718349 - G 86 -8.8 -4.24606 | gap 1, opp_overlap 3718353 AACTGACACCCAAAA CACATCCCCCAAT-TGG CTCA CCTGATTGGGGGATTTG CACATTTTTGGCTAT TERM 3390 3718353 - 3718381 + g 93 -11.8 -3.68853 | opp_overlap 3718349 GACACCCAAAACACA TCCCCCAATTGG CTCAC CTGATTGGGGGA TTTGCACATTTTTGG Ava_2999 3719009 - 3719227 + | hypothetical protein TERM 3391 3719685 - 3719671 - f 76 -5.8 -4.57073 | TATCTCTTGGAAAAA TTACAA ACG TTGTAA ACCTGGATTCTTATT Ava_3000 3719863 - 3720558 + | hexapaptide repeat-containing transferase TERM 3392 3720707 - 3720692 - f 73 -3.2 -5.24129 | CTCCGCCAGAAAAAA CTGAGC ATTA GCTAAG GAAACTGAACATGGT Ava_3001 3720824 - 3720955 + | photosystem II reaction center I protein I TERM 3393 3721047 - 3721011 - f 100 -9.6 -4.7173 | gap 1, opp_overlap 3721013 CACCAGATTGAAAAA CACTAC-CTGCCAAAGA TTTT TCCTTTGCAGTGTAGTG TCTCCCTCAGGGAGT TERM 3394 3721049 - 3721061 + F 78 -9.1 -3.72576 | TTTGCAGTGTAGTGT CTCCC TCA GGGAG TTTACTCAAGCACAG TERM 3395 3722651 - 3722641 - g 70 -5.4 -4.52703 | overlap 3722645 TAAATCAGCAGAAAA TCGA CCG TCGA GAACGGGATAGCACA Ava_3002 3721131 - 3723788 + | hypothetical protein Ava_3003 3725315 - 3723819 - | PAS/PAC sensor hybrid histidine kinase TERM 3396 3724703 - 3724715 + g 74 -6.3 -4.43501 | AATAAACTACTTTTT GTTCT CTG AGAAC TTTTGTAACTGGATT Ava_3004 3728162 - 3725337 - | Signal transduction histidine kinase TERM 3397 3726758 - 3726743 - G 71 -4.8 -4.60255 | opp_overlap 3726745, overlap 3726749 ATAACTCTGCAAAAA TATCAA GGGT TTGATA ATCTCTCAAACTCCA TERM 3398 3728246 - 3728282 + r 81 -9.5 -3.78793 | CACAATCCATCGTCA GTGCTGTTGATTGTTGA CTG TTAACTGTCAACAGCCC TTATTAGTAGTTATG TERM 3399 3728568 - 3728543 - R 78 -7.6 -4.19215 | overlap 3728544 GATACTTAAAAAACA GTAGCCTACG GCAAAG CGTAGGCTAG ATAGGAAATAACTCT TERM 3400 3728567 - 3728544 - R 79 -11.1 -3.10444 | overlap 3728543 ATACTTAAAAAACAG TAGCCTACG GCAAAG CGTAGGCTA GATAGGAAATAACTC Ava_3005 3729450 - 3728812 - | response regulator receiver domain-containing protein TERM 3401 3729384 - 3729371 - G 71 -6.7 -4.1964 | opp_overlap 3729370 TCTAATACCTCAAAA TTGCC AGGG GGCAA CATTTCACGTACTTT Ava_3006 3729775 - 3730692 + | lipoyl synthase Ava_3007 3730972 - 3731106 + | photosystem I 4.8K protein Ava_3008 3732129 - 3731263 - | inner-membrane translocator TERM 3402 3732712 - 3732701 - g 71 -2.2 -5.10077 | AAAGACGGGAAAAAA CTGC GGTT GCAA TTGCAAGAAGCGATC TERM 3403 3732957 - 3732945 - g 80 -2.7 -5.45726 | CACATCTCAAAAAAA TACAA TCT TTGCA GCAGAAATCTCAAAA Ava_3009 3732320 - 3734131 + | histidine kinase Ava_3010 3734255 - 3735085 + | hypothetical protein TERM 3404 3735122 - 3735103 - T 74 -5 -4.81685 | overlap 3735104 ACCAATGATCAAAAA GTCTCTGC TTCC ACAGAAAC GAGAATACAACCATT Ava_3011 3735458 - 3735096 - | hypothetical protein TERM 3405 3735380 - 3735370 - G 76 -6.8 -4.51174 | opp_overlap 3735369 3735376 GTAGCACAAGCAAAA GCAC TTG GTGC ATCATCTTGTTGAAA TERM 3406 3735548 - 3735584 + r 82 -7.5 -4.49556 | gap 1, opp_overlap 3735560, overlap 3735549 3735552 GATGTGCTTTGTTCT CGACTGTAGAGACGTT GCACGG AACGTCTCTACA-TCA TTTATTTGGTGCAAC TERM 3407 3735549 - 3735583 + r 82 -11 -3.29252 | gap 1, opp_overlap 3735560, overlap 3735548 3735552 ATGTGCTTTGTTCTC GACTGTAGAGACGTT GCACGG AACGTCTCTACA-TC ATTTATTTGGTGCAA TERM 3408 3735552 - 3735581 + r 100 -13.8 -3.20639 | opp_overlap 3735560, overlap 3735549 3735548 TGCTTTGTTCTCGAC TGTAGAGACGTT GCACGG AACGTCTCTACA TCATTTATTTGGTGC Ava_3012 3736768 - 3735617 - | lipolytic protein TERM 3409 3737327 - 3737306 - g 83 -8.8 -4.22927 | overlap 3737300 TTAGCAATAGATAAA CTTGACGA TCAAGG TCGTCAAG AGTTAGCAGACAAGG Ava_3013 3737162 - 3737374 + | hypothetical protein Ava_3014 3738425 - 3737520 - | DNA methylase N-4/N-6 Ava_3015 3738898 - 3738458 - | cyanate hydratase Ava_3016 3739447 - 3739019 - | hypothetical protein Ava_3017 3741294 - 3739486 - | ABC transporter, transmembrane region TERM 3410 3741202 - 3741180 - G 76 -9.2 -3.55973 | overlap 3741176 3741181 GAATTGAACAACCAA CCGCCAACAA CAT TTGTTGACGA TACTGGTATCCATAG TERM 3411 3741201 - 3741181 - G 74 -10.5 -2.72861 | overlap 3741180 3741176 AATTGAACAACCAAC CGCCAACAA CAT TTGTTGACG ATACTGGTATCCATA TERM 3412 3742177 - 3742165 - g 75 -9.1 -3.65426 | opp_overlap 3742164 3742163 GCAGAAACTCTCAAA GCCCA AGG TGGGC AATTAGTACTGCAAA Ava_3018 3741532 - 3742317 + | SPFH domain-containing protein/band 7 family protein Ava_3019 3742366 - 3742782 + | hypothetical protein TERM 3413 3742800 - 3742829 + F 75 -9.4 -3.21925 | GTTTAGATTTAATCT GAGGTACGCT ACACTCAATA AGCGTACCTC TTCCTCCTCAAATCT Ava_3020 3742895 - 3744835 + | ABC transporter-like Ava_3021 3745084 - 3745587 + | pentapeptide repeat-containing protein purT 3745640 - 3746815 + | phosphoribosylglycinamide formyltransferase 2 Ava_3023 3746949 - 3747401 + | hypothetical protein Ava_3024 3747417 - 3748076 + | hypothetical protein Ava_3025 3748254 - 3748832 + | GCN5-related N-acetyltransferase TERM 3414 3749173 - 3749196 + F 74 -3.9 -5.14477 | opp_overlap 3749173, overlap 3749175 ATCGCTCGACAATCA TCCTCAACA TTCTGT TGTTGAGAA TTTTTTGAGTGTCTG Ava_3026 3749310 - 3749417 + | hypothetical protein Ava_3027 3749675 - 3750784 + | hypothetical protein Ava_3028 3750870 - 3751202 + | plasma membrane protein of unknown function TERM 3415 3751338 - 3751280 - f 79 -10.3 -3.14564 | gap 1, opp_overlap 3751299, overlap 3751268 3751285 3751291 3751298 3751299 CGACTGTTGCATCAA GAGGACACAGAC-CCCAAAGGCCGAGGT CATA ACCTCGGCTTTTGAGTGACCGTGTTTCC TGTCCGCACTACCTT TERM 3416 3751333 - 3751285 - f 100 -15.4 -2.77523 | gap 1, opp_overlap 3751299, overlap 3751280 3751291 3751298 3751299 GTTGCATCAAGAGGA CACAGAC-CCCAAAGGCCGAGGT CATA ACCTCGGCTTTTGAGTGACCGTG TTTCCTGTCCGCACT TERM 3417 3751326 - 3751291 - f 88 -12.6 -3.05727 | opp_overlap 3751299, overlap 3751285 3751280 3751298 3751299 TCAAGAGGACACAGA CCCCAAAGGCCGAGGT CATA ACCTCGGCTTTTGAGT GACCGTGTTTCCTGT TERM 3418 3751319 - 3751298 - f 84 -10.1 -3.66139 | opp_overlap 3751299, overlap 3751291 3751285 3751280 3751299 GACACAGACCCCAAA GGCCGAGGT CATA ACCTCGGCT TTTGAGTGACCGTGT TERM 3419 3751318 - 3751299 - f 100 -13.6 -2.79202 | opp_overlap 3751299, overlap 3751298 3751291 3751285 3751280 ACACAGACCCCAAAG GCCGAGGT CATA ACCTCGGC TTTTGAGTGACCGTG TERM 3420 3751299 - 3751318 + F 100 -13.6 -4.18494 | opp_overlap 3751298 3751291 3751285 3751280 3751299 ACACAGACCCCAAAG GCCGAGGT CATA ACCTCGGC TTTTGAGTGACCGTG TERM 3421 3752206 - 3752218 + G 71 -4.9 -4.63932 | AGTGCTACGGCATTC TTGAT TGG ATCAA TTTTATTGGGGGGTG Ava_3029 3751480 - 3752841 + | Sodium/hydrogen exchanger TERM 3422 3752907 - 3752943 + T 100 -31.1 -5.12068 | opp_overlap 3752912 ATTATTATAGGGGAA GGGAAGTCAGGGCTGCC GAT GGCAGCCCTGACTTCCC TTTTTATTGAATATA TERM 3423 3752938 - 3752912 - T 100 -22.4 -3.1875 | opp_overlap 3752907 TATAGGGGAAGGGAA GTCAGGGCTGCC GAT GGCAGCCCTGAC TTCCCTTTTTATTGA TERM 3424 3753175 - 3753198 + T 80 -6.8 -4.87318 | gap 1, opp_overlap 3753175 AAAAAACTTTCACAA CTCCCC-TATT AGA AGTAAGGGGAG TTTTTGGATTTTACA Ava_3030 3753498 - 3753226 - | hypothetical protein Ava_3031 3753747 - 3754559 + | hypothetical protein Ava_3032 3755379 - 3755615 + | hypothetical protein TERM 3425 3756013 - 3756032 + G 73 -7.2 -4.20516 | opp_overlap 3756013, overlap 3756014 TAATGGACAGGAAAT TTTTGTCC CACT GGACAAAG TTTCTTACATGAAGA Ava_3033 3755798 - 3757555 + | GAF sensor Signal transduction histidine kinase Ava_3034 3757926 - 3758156 + | nitrogen-fixing NifU-like Ava_3035 3758292 - 3760526 + | glycoside hydrolase family protein Ava_3036 3760762 - 3761844 + | Serine/threonine protein kinase Ava_3037 3762009 - 3763373 + | tRNA-i(6)A37 modification enzyme MiaB Ava_3038 3763423 - 3763647 + | hypothetical protein Ava_3039 3763644 - 3763985 + | hypothetical protein Ava_3040 3764791 - 3764018 - | hypothetical protein Ava_3041 3765471 - 3765064 - | hypothetical protein TERM 3426 3765633 - 3765650 + G 84 -9.9 -3.8186 | TTTTGGGATTAGTGA TGGCGAT CGCG ATCGCCA TTGTTGCTTACCATA TERM 3427 3765696 - 3765732 + G 100 -14.5 -3.36492 | opp_overlap 3765716, overlap 3765699 GTTCGCCTTCAGCAT CTGCCCCAGTCACTG TTAAACT CAGTGGCTGGGGTGG TTCTCCGGTTGAGCA TERM 3428 3765699 - 3765729 + G 100 -14.8 -2.84794 | opp_overlap 3765716, overlap 3765696 CGCCTTCAGCATCTG CCCCAGTCACTG TTAAACT CAGTGGCTGGGG TGGTTCTCCGGTTGA TERM 3429 3766510 - 3766487 - g 100 -3.9 -5.96521 | gap 1, opp_overlap 3766487 ATTAATCAAAAAAAA GGC-ACAATG GTATT CACTGTTGCC TATGTCATGAGTAAG Ava_3042 3765632 - 3766852 + | extracellular solute-binding protein TERM 3430 3768624 - 3768606 - g 71 -9.6 -3.04263 | AGTCCATCCTGAAGA CCGAGAGA AGT TCTCTCAG TCTGCCAAGAACAGC TERM 3431 3768764 - 3768748 - g 78 -9.5 -3.60074 | GACAAAGCGGGTAAA CCAATCA GGA TGATTGG CACTACTAGAGATAT Ava_3043 3767386 - 3770754 + | multi-sensor hybrid histidine kinase pfkA 3771873 - 3770800 - | 6-phosphofructokinase TERM 3432 3772040 - 3772060 + r 86 -9.7 -4.04394 | opp_overlap 3772041 3772042 3772054, overlap 3772041 3772054 TTTAGATCCCCCTAA ATCCCCCTT AAA AAGGGGGAC TTTGATTCATTTCCC TERM 3433 3772041 - 3772059 + r 93 -13.2 -3.01914 | opp_overlap 3772041 3772042 3772054, overlap 3772040 3772054 TTAGATCCCCCTAAA TCCCCCTT AAA AAGGGGGA CTTTGATTCATTTCC TERM 3434 3772091 - 3772041 - R 100 -16.2 -3.55071 | opp_overlap 3772040 3772041 3772054, overlap 3772042 3772054 TTAGATCCCCCTAAA TCCCCCTTAAAAAGGGGGACTTTG ATT CATTTCCCCCCTTTTTAAGGGGGG TTAGGGAGGATCAAT TERM 3435 3772090 - 3772042 - R 100 -19.7 -2.72829 | opp_overlap 3772041 3772040 3772054, overlap 3772041 3772054 TAGATCCCCCTAAAT CCCCCTTAAAAAGGGGGACTTTG ATT CATTTCCCCCCTTTTTAAGGGGG GTTAGGGAGGATCAA Ava_3045 3773277 - 3772246 - | dihydroorotate dehydrogenase 2 TERM 3436 3772492 - 3772508 + g 73 -5.1 -4.58663 | CAACATAGTAATATT TGCTCCT GCC ATGAGCA TTTTTAAGACATCAT Ava_3046 3777102 - 3773530 - | ferredoxin (flavodoxin) oxidoreductase TERM 3437 3774379 - 3774401 + g 71 -4.9 -4.65722 | CGTTGCCAGTTCTTG CAGTAATTG GCTGG CAATTTCTG TTTGTTTATCTATAG Ava_3047 3777676 - 3778059 + | hypothetical protein Ava_3048 3779298 - 3778117 - | chromate transporter Ava_3049 3779435 - 3779860 + | hypothetical protein Ava_3050 3780256 - 3780023 - | hypothetical protein TERM 3438 3781201 - 3781184 - g 73 -5.5 -4.6645 | TATATAGACACAAAA CAAGGCC AAAA AGCCCTG GAACTACTCACGGGT TERM 3439 3781679 - 3781656 - g 71 -4.6 -4.64657 | gap 1 CCAAAGCGCCAAAAA CAGCCC-GTAA TCT CTACCGGACTG CGCGGGGATGGCAAG Ava_3051 3780878 - 3783073 + | lytic transglycosylase, catalytic TERM 3440 3783097 - 3783153 + T 72 -9.6 -2.71791 | gap 1, overlap 3783097 GGACGAGGAATTTTA TGGTTGTTGATTGTTGACGGTTAACTG TCAA CTGTCAACCGTCAACAAATTAC-ACCA ATTTGAAAAAAGAAT TERM 3441 3783191 - 3783208 + T 88 -11.3 -3.65046 | ATAAACCATTTGTAG GACGCGA TGAA TCGCGTC TTCTTCACCTACGCC Ava_3052 3786753 - 3783217 - | methionine synthase (B12-dependent) TERM 3442 3783424 - 3783438 + g 70 -7.8 -3.61398 | opp_overlap 3783420 3783423, overlap 3783420 TTGTGCCAAAATATC CCGGAT ATT GTCCGG TTCTTCAGCACCGAA TERM 3443 3783555 - 3783534 - G 71 -4.5 -4.66535 | opp_overlap 3783539, overlap 3783536 AACCGTGAAAATAAA GATAATCAG TGTA CTGATTATT CGCAAACAGTTTTTG TERM 3444 3783553 - 3783536 - G 72 -7.1 -3.93868 | opp_overlap 3783539, overlap 3783534 CCGTGAAAATAAAGA TAATCAG TGTA CTGATTA TTCGCAAACAGTTTT TERM 3445 3786640 - 3786668 + g 80 -9 -3.99898 | gap 1, opp_overlap 3786647 3786648, overlap 3786648 TTCATACTGCACACC CCCGAAATCCTCA GCCG TGAGG-TTTTGGG TTTGTAGATTAGTTC TERM 3446 3786648 - 3786661 + g 74 -6.7 -4.39571 | opp_overlap 3786648 3786647, overlap 3786640 GCACACCCCCGAAAT CCTCA GCCG TGAGG TTTTGGGTTTGTAGA TERM 3447 3786720 - 3786708 - G 73 -9.1 -3.52073 | CGTCGAAGACGATAA CCGGA AAT TCCGG ACTGTGCAGGCGTTT Ava_3053 3787382 - 3787726 + | hypothetical protein TERM 3448 3789494 - 3789481 - g 74 -6.7 -4.3129 | opp_overlap 3789481 GATTTAGTAGGAAAA GTTCC CCCC GGAAC TAGTTGGCAAGCAAC Ava_3055 3788449 - 3790017 + | transposase IS4 Ava_3056 3793257 - 3790192 - | TPR repeat-containing protein TERM 3449 3790714 - 3790695 - G 76 -9.4 -3.49618 | GCCGCAGATAATTAA CTTGAATG ATGC CATTCAAG AAGTGTAGATAAAGC TERM 3450 3793247 - 3793217 - G 100 -9.8 -4.51378 | overlap 3793218 AGGGAGACTACAAAA CCGGTGCCAACAAT CAC ATTATTGACACCGC GAATTTGCACAGTAA TERM 3451 3793246 - 3793218 - G 100 -13.3 -3.30104 | overlap 3793217 GGGAGACTACAAAAC CGGTGCCAACAAT CAC ATTATTGACACCG CGAATTTGCACAGTA Ava_3057 3793609 - 3793265 - | hypothetical protein Ava_3058 3794472 - 3793744 - | hypothetical protein Ava_3059 3795950 - 3794703 - | hypothetical protein Ava_3060 3796107 - 3796949 + | hypothetical protein Ava_3061 3797946 - 3796966 - | aldo/keto reductase Ava_3062 3799217 - 3798051 - | periplasmic polyamine-binding protein of ABC transporter TERM 3452 3798947 - 3798959 + g 79 -7.7 -4.33151 | ATCGAGTCCATTCTT GCTCA TTG TGAGC TTTTGGGTTATGCTG Ava_3063 3799701 - 3800075 + | hypothetical protein Ava_3064 3801322 - 3800165 - | hypothetical protein Ava_3065 3802210 - 3801437 - | hypothetical protein Ava_3066 3802921 - 3802223 - | Crp/FNR family transcriptional regulator TERM 3453 3803876 - 3803887 + G 73 -5.8 -4.57353 | opp_overlap 3803868 ACAGCAATGGCAAGC GCCT GTCT AGGC TTTTGTCTAGTCAGG TERM 3454 3805120 - 3805130 + G 73 -5.4 -4.67692 | opp_overlap 3805120 GTATGGTTTGATCAA TCAG ATA CTGA TTTGTTTGATTTTAG TERM 3455 3806068 - 3806086 + G 70 -5.2 -4.41348 | overlap 3806069 TCATTCCAGCAATCG TTCCGGCT ACC AGCCGAAG TTTATTTGCCGACGG Ava_3067 3803803 - 3807798 + | hypothetical protein Ava_3068 3807990 - 3808592 + | hypothetical protein Ava_3069 3808869 - 3809333 + | hypothetical protein Ava_3070 3809550 - 3810413 + | GCN5-related N-acetyltransferase Ava_3071 3811655 - 3810486 - | inosine/uridine-preferring nucleoside hydrolase Ava_3072 3812448 - 3811819 - | two component LuxR family transcriptional regulator Ava_3073 3813490 - 3812501 - | PDZ/DHR/GLGF Ava_3074 3814284 - 3813616 - | HAD family hydrolase TERM 3456 3814241 - 3814221 - G 71 -9.1 -3.27476 | ATGCCCAACGAGCAA TGCTTTCTG TAT CAAAAAGCA AACCATCCATATCAA Ava_3075 3814354 - 3815184 + | uroporphyrinogen-III synthase TERM 3457 3815218 - 3815185 - T 84 -11.8 -3.1875 | opp_overlap 3815185 3815184 GATAGTCCAACGTAA TGCGATCGCCTATG TAATAT CGTAAGCGATCGCA GTTCATCAAATATTT TERM 3458 3815185 - 3815218 + T 80 -11.8 -2.51187 | opp_overlap 3815185, overlap 3815184 GATAGTCCAACGTAA TGCGATCGCCTATG TAATAT CGTAAGCGATCGCA GTTCATCAAATATTT Ava_3076 3815791 - 3815270 - | heat shock protein Hsp20 Ava_3077 3816079 - 3816399 + | small multidrug resistance protein TERM 3459 3816424 - 3816403 - f 73 -2.2 -5.30616 | TCAGGGAAATAAAAA CTCTACCC ACAAGG GGATCGAG TTTTGTCAGTGGTCA TERM 3460 3816573 - 3816547 - f 100 -12.5 -5.11112 | AAAGCGCAATAAAAA TACCTCATACA TAATT TGTATGAGGTA AAAACAGAGGAAATC TERM 3461 3816755 - 3816726 - f 71 -4.3 -4.83169 | opp_overlap 3816729, overlap 3816727 3816729 ATGGTGTTAGAAAAA TTAGCAGACTAAT CAAC ATCAGTCTGCTTT ATATGCTCTTGAAAA TERM 3462 3816752 - 3816729 - f 80 -10.4 -3.31915 | opp_overlap 3816729, overlap 3816727 3816726 GTGTTAGAAAAATTA GCAGACTAAT CAAC ATCAGTCTGC TTTATATGCTCTTGA TERM 3463 3816729 - 3816752 + F 79 -8.2 -4.13591 | opp_overlap 3816729 3816727 3816726 GTGTTAGAAAAATTA GCAGACTAAT CAAC ATCAGTCTGC TTTATATGCTCTTGA TERM 3464 3816842 - 3816858 + F 88 -5.1 -5.4593 | overlap 3816843 AGCGAATTGCTTTTT GTAGCCA GTT TGGCTAA TTTTTATTATTTTCC TERM 3465 3816843 - 3816857 + F 80 -8.6 -3.85118 | overlap 3816842 GCGAATTGCTTTTTG TAGCCA GTT TGGCTA ATTTTTATTATTTTC TERM 3466 3816979 - 3817001 + F 100 -14.2 -3.72152 | overlap 3816972 3816982 AAATCTCAGCATCTG TAGGGTGGGC ATT GCCCACCTTA TTATGGTTTTAGTTG TERM 3467 3816982 - 3816998 + F 100 -13.7 -3.96497 | overlap 3816979 3816972 TCTCAGCATCTGTAG GGTGGGC ATT GCCCACC TTATTATGGTTTTAG Ava_3078 3817350 - 3822485 + | peptidase C14, caspase catalytic subunit p20 TERM 3468 3823576 - 3823596 + G 86 -11.3 -3.28712 | opp_overlap 3823574 TCAAGCCGGAACATT TGAGTTAGA ATA TCTAACTCA TTCTGCAACAACAAC TERM 3469 3826190 - 3826167 - g 82 -6 -5.06451 | overlap 3826170 CAGCATCCCAAAAAA GAGTAACAGC GATC GCTGTTAGCC GAAATGGTAAATATT Ava_3079 3822590 - 3827872 + | peptidase C14, caspase catalytic subunit p20 Ava_3080 3827879 - 3828658 + | hypothetical protein TERM 3470 3828766 - 3828730 - T 78 -7.5 -4.20516 | gap 1, opp_overlap 3828741, overlap 3828731 3828733 GTTGCACCCAATAAA TGA-TGTAGAGACGTT TCATGC AACGTCTCTACAGTCC AGAATAAAACACATC TERM 3471 3828765 - 3828731 - T 80 -11 -3.11988 | gap 1, opp_overlap 3828741, overlap 3828730 3828733 TTGCACCCAATAAAT GA-TGTAGAGACGTT TCATGC AACGTCTCTACAGTC CAGAATAAAACACAT TERM 3472 3828762 - 3828733 - T 100 -13.8 -3.11702 | opp_overlap 3828741, overlap 3828731 3828730 GCACCCAATAAATGA TGTAGAGACGTT TCATGC AACGTCTCTACA GTCCAGAATAAAACA Ava_3081 3829546 - 3828860 - | ribonuclease III TERM 3473 3828906 - 3828925 + g 100 -4.9 -5.93252 | overlap 3828908 GCTAAAGCATTTTCG GCGGCTG CTTTCT CAGCCTC TTTTTTATTTTTACC TERM 3474 3828908 - 3828923 + g 77 -6.1 -4.585 | overlap 3828906 TAAAGCATTTTCGGC GGCTG CTTTCT CAGCC TCTTTTTTATTTTTA TERM 3475 3829644 - 3829630 - R 91 -5.6 -5.88197 | opp_overlap 3829630 TTAAACATAAAAAAA CCGCAA TAG TGGCGG TTTTAGATAAACTCA Ava_3082 3830479 - 3829694 - | hypothetical protein Ava_3083 3831475 - 3830888 - | hypothetical protein Ava_3084 3831583 - 3833619 + | protoporphyrin IX magnesium-chelatase Ava_3085 3834483 - 3833698 - | RNA polymerase sigma factor SigF TERM 3476 3833951 - 3833963 + g 70 -7.7 -3.5944 | GGACAGGGTAGGGCT TCACC TAA GGTGA TTTGGCAATCTACAT TERM 3477 3834341 - 3834359 + g 75 -3.1 -5.1356 | GGTTCATTACATTGA TGGCTAA ATTTA TGAGCCA TTTTTCTTACTAAGC TERM 3478 3834872 - 3834924 + H 100 -16.3 -3.57561 | overlap 3834867 3834873 AGGGGAGCCACTGCG TTGGTGAGGCAGTTCCTTCTGGGGG TTT CCCCCAGAAGGAACTGCCGAAAGGG TTTCCCGGCTTAGAG TERM 3479 3834873 - 3834923 + H 100 -17.6 -2.74322 | overlap 3834867 3834872 GGGGAGCCACTGCGT TGGTGAGGCAGTTCCTTCTGGGGG TTT CCCCCAGAAGGAACTGCCGAAAGG GTTTCCCGGCTTAGA TERM 3480 3834945 - 3834967 + H 78 -9 -3.70546 | opp_overlap 3834943 CGGCTTAGAGCAAGT GGCGTTGGGC ATT GCCCACCGGC TTATGGTTTTGATGG TERM 3481 3835573 - 3835607 + H 75 -9.5 -3.11988 | gap 1, overlap 3835572 3835576 ATGTGCTTTATTTTG GACTGTAGAGACGTTG TATG CAAAGTCTCTACA-TC ATTTATTGGGTGCAA TERM 3482 3835576 - 3835605 + H 87 -12.3 -3.11702 | overlap 3835573 3835572 TGCTTTATTTTGGAC TGTAGAGACGTTG TATG CAAAGTCTCTACA TCATTTATTGGGTGC TERM 3483 3836613 - 3836625 + G 74 -4.1 -5.06816 | AGCGATTGGGATGCT CATTG ACC CAGTG TTTTTGTTGCAAAAT Ava_3086 3835753 - 3838074 + | Sodium/hydrogen exchanger Ava_3087 3838356 - 3838138 - | hypothetical protein dapF 3838451 - 3839299 + | diaminopimelate epimerase TERM 3484 3839484 - 3839444 - f 100 -16.6 -2.91383 | gap 1, opp_overlap 3839445 3839448 3839455, overlap 3839455 AGTTTGATTTACAGA TGTATACCAAAGAGCTAGT CACC ACTAGCTCTTTGGTATA-A CTTCCTCCGTAATTG TERM 3485 3839445 - 3839485 + F 100 -18 -3.20435 | gap 1, opp_overlap 3839444 3839455, overlap 3839448 3839455 GTTTGATTTACAGAT G-TATACCAAAGAGCTAGT CACC ACTAGCTCTTTGGTATAAC TTCCTCCGTAATTGG TERM 3486 3839448 - 3839481 + F 100 -19.9 -2.57244 | opp_overlap 3839444 3839455, overlap 3839445 3839455 TGATTTACAGATGTA TACCAAAGAGCTAGT CACC ACTAGCTCTTTGGTA TAACTTCCTCCGTAA TERM 3487 3839455 - 3839474 + F 89 -10.8 -3.86283 | opp_overlap 3839444 3839455, overlap 3839448 3839445 CAGATGTATACCAAA GAGCTAGT CACC ACTAGCTC TTTGGTATAACTTCC TERM 3488 3839474 - 3839455 - f 89 -10.8 -3.85539 | opp_overlap 3839455 3839448 3839445, overlap 3839444 CAGATGTATACCAAA GAGCTAGT CACC ACTAGCTC TTTGGTATAACTTCC Ava_3089 3839529 - 3839993 + | response regulator receiver domain-containing protein TERM 3489 3839999 - 3840049 + T 100 -15 -2.87548 | opp_overlap 3840001, overlap 3840001 3840010 TAGTCATTAGCCAGA GACGTGATTAATCGCGTCTGTA CAGTTGT TAGAGATGCGATTAATCCCGTC TGTACTGCTATTGTT TERM 3490 3840001 - 3840047 + T 83 -11.8 -2.97902 | opp_overlap 3840001, overlap 3839999 3840010 GTCATTAGCCAGAGA CGTGATTAATCGCGTCTGTA CAGTTGT TAGAGATGCGATTAATCCCG TCTGTACTGCTATTG TERM 3491 3840047 - 3840001 - T 73 -9.6 -2.92463 | opp_overlap 3839999 3840001 3840010 GTCATTAGCCAGAGA CGTGATTAATCGCGTCTGTA CAGTTGT TAGAGATGCGATTAATCCCG TCTGTACTGCTATTG Ava_3090 3841694 - 3840057 - | hypothetical protein Ava_3091 3841838 - 3843619 + | gamma-glutamyltransferase 1 TERM 3492 3844408 - 3844424 + G 87 -6.5 -5.19275 | opp_overlap 3844408 GTTACATTGGGCAAA CGTACAC CAA GAGTACG TTTTATTTTGTGAGT Ava_3092 3843677 - 3844837 + | Phage integrase Ava_3093 3845089 - 3845706 + | hypothetical protein TERM 3493 3845747 - 3845713 - f 72 -3.6 -5.02323 | gap 1, overlap 3845715 GGACGATAAACAAAA TAGGTCTGGGA-AGC GACCAA ACTACCCCAGACCAA AGATACCAAAACACA Ava_3094 3845802 - 3847790 + | virulence-associated E TERM 3494 3847818 - 3847846 + F 78 -3.9 -5.3798 | gap 1 GTTAACCCAACAATA CACCATGACTCT CTAAGT AGGG-CGTGGTG TTTTTGTTGTTGTTG TERM 3495 3848300 - 3848269 - f 71 -7.3 -3.88438 | gap 1, opp_overlap 3848269 TTATAGTAAACATAA GCCAGAG-CGTTGT AATAA ACAGCGTCCCTGGC TTTATAAATGTCACG TERM 3496 3848269 - 3848300 + F 71 -7.3 -3.95073 | gap 1, opp_overlap 3848269 TTATAGTAAACATAA GCCAGAG-CGTTGT AATAA ACAGCGTCCCTGGC TTTATAAATGTCACG TERM 3497 3848899 - 3848860 - f 100 -11.6 -5.01732 | gap 1, opp_overlap 3848868 AATTTCCCCAAAAAA CGACAAAGGACGCTGAGAC TAT GCCCCAACGTC-TTTATCG GTGTTAGTAAGGTGT Ava_3095 3849463 - 3849978 + | hypothetical protein Ava_3096 3850251 - 3851186 + | tyrosine recombinase XerD subunit Ava_3097 3851314 - 3851607 + | hypothetical protein Ava_3098 3852065 - 3851802 - | hypothetical protein Ava_3099 3852989 - 3852408 - | hypothetical protein TERM 3498 3853625 - 3853615 - g 71 -3.2 -5.01535 | CGACAAGTAGAAAAA GATG CAG CACC TTACTGTGTGGAAAA Ava_3100 3853069 - 3854028 + | aldo/keto reductase TERM 3499 3854448 - 3854393 - f 75 -8.6 -3.64049 | gap 1, opp_overlap 3854401 3854411, overlap 3854403 3854411 TTAACAATTTTGAAA CCTGTGAATATTGAAAAACCTGGT-CA ACC TGCACCAGGTTTTTCAATATTTTAATG CTTTTCAACATAAAG TERM 3500 3854401 - 3854440 + F 100 -17.6 -4.42667 | gap 1, opp_overlap 3854393 3854403 3854411, overlap 3854411 TTTGAAACCTGTGAA TATTGAAAAACCTGGT-CA ACC TGCACCAGGTTTTTCAATA TTTTAATGCTTTTCA TERM 3501 3854438 - 3854403 - f 100 -15.8 -3.05294 | gap 1, opp_overlap 3854401 3854411, overlap 3854393 3854411 TGAAACCTGTGAATA TTGAAAAACCTGGT-CA ACC TGCACCAGGTTTTTCAA TATTTTAATGCTTTT TERM 3502 3854430 - 3854411 - f 83 -7.2 -4.74706 | gap 1, opp_overlap 3854401 3854411, overlap 3854403 3854393 GTGAATATTGAAAAA CCTGGT-CA ACC TGCACCAGG TTTTTCAATATTTTA TERM 3503 3854411 - 3854430 + F 83 -7.2 -4.80396 | gap 1, opp_overlap 3854411 3854403 3854393, overlap 3854401 GTGAATATTGAAAAA CCTGGT-CA ACC TGCACCAGG TTTTTCAATATTTTA TERM 3504 3854619 - 3854638 + F 100 -7.8 -6.11243 | opp_overlap 3854621, overlap 3854621 TTAAATAGTATAGAC AAGCCCAC ATTT GTGGGCTA TTTTTTTTATTCACT TERM 3505 3854621 - 3854636 + F 95 -10.4 -4.69435 | opp_overlap 3854621, overlap 3854619 AAATAGTATAGACAA GCCCAC ATTT GTGGGC TATTTTTTTTATTCA TERM 3506 3854636 - 3854621 - f 86 -10.4 -3.65034 | opp_overlap 3854621 3854619 AAATAGTATAGACAA GCCCAC ATTT GTGGGC TATTTTTTTTATTCA TERM 3507 3854807 - 3854830 + F 88 -3.2 -5.8187 | gap 1, opp_overlap 3854801 3854802, overlap 3854801 AATTAAAGACCTCGC GGATTT-ATCC GGG GGCTTAAATCC TTTTTTTGTTCGGTC TERM 3508 3855483 - 3855495 + G 71 -4.8 -4.67982 | opp_overlap 3855483 TATCGTAAACAAGAT GGTG CAAGT CACC TTTTATTAAATAAGA Ava_3101 3855183 - 3855902 + | hypothetical protein Ava_3102 3857003 - 3856065 - | Alpha/beta hydrolase fold Ava_3104 3857430 - 3859154 + | ankyrin TERM 3509 3859248 - 3859264 + F 79 -5 -5.14698 | GTTTTGCCCTGATTT CCTGGC TACCT GCCTGG TTTTATTTTAAATTT TERM 3510 3860480 - 3860490 + G 74 -6.8 -4.39828 | opp_overlap 3860475 3860480 TTGGGATTAACATTA GCTG GTA CAGC TTTTGTAGGAGTATT Ava_3105 3859418 - 3861469 + | TrkA-N aroE 3862024 - 3862893 + | shikimate 5-dehydrogenase Ava_3107 3863557 - 3862955 - | hypothetical protein Ava_3108 3863709 - 3864212 + | hypothetical protein TERM 3511 3864229 - 3864263 + T 74 -8 -3.92641 | opp_overlap 3864229 TTGGAAATGAGGAGA CTTGTAGAGACTTG TTTACCT TACGTCTCTACAAG TTTATGGCTCAGGTT Ava_3109 3864559 - 3864281 - | hypothetical protein Ava_3110 3865100 - 3864750 - | hypothetical protein upp 3865815 - 3865165 - | uracil phosphoribosyltransferase TERM 3512 3866050 - 3866084 + H 88 -5.7 -5.49569 | gap 1, overlap 3866053 CTTTAAGGATCGGCA GACGGGATTAGTCGGC GGTA GCAGGCTCATCCC-TC TTTTTTGTATTGGTA TERM 3513 3866053 - 3866082 + H 86 -8.5 -4.36863 | overlap 3866050 TAAGGATCGGCAGAC GGGATTAGTCGGC GGTA GCAGGCTCATCCC TCTTTTTTGTATTGG TERM 3514 3866199 - 3866220 + H 73 -2.2 -5.28942 | TGACAACTGACAAAA CTCTATCC CCTTGT GGGTCGAG TTTTTATTTACGATA Ava_3112 3866325 - 3867845 + | FAD dependent oxidoreductase TERM 3515 3867963 - 3868019 + T 100 -15.4 -3.01329 | gap 1, opp_overlap 3867963 3867966 AGCTGTACCAAGAAA TCATTCACA-CTGACGCACCCTACTAT TGGG ACAGTAGGGTGCGTCAGATGTGGAAAA TCCTTTAATGTGTAC TERM 3516 3868019 - 3867963 - T 100 -17.6 -4.2461 | gap 1, opp_overlap 3867963, overlap 3867966 AGCTGTACCAAGAAA TCATTCACA-CTGACGCACCCTACTAT TGGG ACAGTAGGGTGCGTCAGATGTGGAAAA TCCTTTAATGTGTAC TERM 3517 3868016 - 3867966 - T 100 -21.5 -3.12942 | gap 1, opp_overlap 3867963, overlap 3867963 TGTACCAAGAAATCA TTCACA-CTGACGCACCCTACTAT TGGG ACAGTAGGGTGCGTCAGATGTGGA AAATCCTTTAATGTG Ava_3113 3869062 - 3868127 - | Alpha/beta hydrolase fold Ava_3114 3869536 - 3869159 - | hypothetical protein Ava_3115 3870587 - 3869622 - | ribonuclease BN TERM 3518 3870074 - 3870046 - G 70 -3.8 -4.78121 | AAAACTAAAAAAGAA GCCAGTACCAAC AGCAA GATAGTACCGAC TGTTAAGCCTAAGGA TERM 3519 3870654 - 3870702 + H 75 -6.9 -4.30995 | gap 1, opp_overlap 3870654 3870657, overlap 3870650 3870657 CGTTGTATTGACACA GTACTGAGCCAAAATGTGCAAC GCGGAA GTTGTGCATTTCGGCTCAC-AC TTGTTTTATACAGAG TERM 3520 3870657 - 3870700 + H 73 -9.7 -2.50387 | opp_overlap 3870657 3870654, overlap 3870654 3870650 TGTATTGACACAGTA CTGAGCCAAAATGTGCAAC GCGGAA GTTGTGCATTTCGGCTCAC ACTTGTTTTATACAG Ava_3116 3870822 - 3871295 + | hypothetical protein Ava_3117 3872490 - 3871399 - | threonine synthase TERM 3521 3872876 - 3872899 + H 100 -11 -5.32565 | GCACCCTGATGATCT GGAGAGCTGC CCAA GTGGCTCTCC TTTTTTACTTGATTG TERM 3522 3873017 - 3872985 - H 91 -11.4 -4.08767 | opp_overlap 3872983 3872985 CTCAGGTTGTCAAAA GTCCAAAGTCCAAG CTAGC CTTTGACTCTGGAC TCTTGACTATGGACA TERM 3523 3872985 - 3873017 + H 75 -9.2 -3.12327 | opp_overlap 3872985, overlap 3872983 CTCAGGTTGTCAAAA GTCCAAAGTCCAAG CTAGC CTTTGACTCTGGAC TCTTGACTATGGACA TERM 3524 3873743 - 3873765 + G 71 -4.8 -4.70169 | opp_overlap 3873726, overlap 3873744 TCAGGGATGATTCAT CCCAACATGG CGA CAATGTTGGC TTTTGTTACCTGTGA TERM 3525 3873744 - 3873764 + G 71 -8.3 -3.41378 | opp_overlap 3873726, overlap 3873743 CAGGGATGATTCATC CCAACATGG CGA CAATGTTGG CTTTTGTTACCTGTG argJ 3873185 - 3874426 + | bifunctional ornithine acetyltransferase/N-acetylglutamate synthase protein TERM 3526 3874867 - 3874895 + G 82 -6 -4.96848 | opp_overlap 3874860 3874873, overlap 3874873 ACAGACAACCCCAAC GAAAAATGGGGA CGTAA TCCCCATATTGC TTTTTCTGTCACCGA TERM 3527 3874889 - 3874873 - g 100 -8.7 -4.87893 | opp_overlap 3874873 3874867, overlap 3874860 AACCCCAACGAAAAA TGGGGAC GTA ATCCCCA TATTGCTTTTTCTGT Ava_3119 3874624 - 3875034 + | glyoxalase/bleomycin resistance protein/dioxygenase Ava_3120 3875098 - 3876390 + | recombinase Ava_3121 3876674 - 3878293 + | glycosyl transferase family protein Ava_3122 3878835 - 3878470 - | hypothetical protein Ava_3123 3879666 - 3879418 - | hypothetical protein TERM 3528 3879474 - 3879497 + g 84 -11.2 -3.61404 | opp_overlap 3879479, overlap 3879479 TTTTAGCTACAGATT GTAAATTTGG TAAA CCAAATTTAC TTGTCTGGTTGATAA TERM 3529 3880981 - 3880956 - g 95 -11.3 -3.86283 | opp_overlap 3880941 CTAATTTACAGCAAA TTGGTCTTTCA ATTC CGAAAGACCAA AAAGTAGAAATTTTG TERM 3530 3881424 - 3881403 - g 72 -9.5 -3.20747 | AGCAAATCGCATTAA CGTGTAACT TGGC AGTCACACG CCAGACACTTTACCG Ava_3124 3879698 - 3881488 + | Cl- channel, voltage gated Ava_3125 3881930 - 3881517 - | transcriptional regulator AbrB TERM 3531 3882538 - 3882526 - g 71 -4.1 -4.8269 | GAGAACCAGCAAAAA TATCC ATA GGACA AATTTTAGAGGCAGT Ava_3126 3882306 - 3882749 + | BadM/Rrf2 family transcriptional regulator cobD 3882786 - 3883748 + | cobalamin biosynthesis protein Ava_3128 3883875 - 3884417 + | pyrimidine regulatory protein PyrR Ava_3129 3885577 - 3884609 - | hypothetical protein Ava_3130 3886487 - 3885570 - | hypothetical protein TERM 3532 3886587 - 3886617 + r 100 -21.4 -3.09208 | opp_overlap 3886591, overlap 3886589 3886591 TTGACATCACCGCCA GATACCCGACTTCT CTA AGAAGTCGGGTATC TTAAATCGCTACTTT TERM 3533 3886589 - 3886615 + r 100 -18.2 -3.10056 | opp_overlap 3886591, overlap 3886587 3886591 GACATCACCGCCAGA TACCCGACTTCT CTA AGAAGTCGGGTA TCTTAAATCGCTACT TERM 3534 3886613 - 3886591 - R 100 -16.4 -2.88861 | opp_overlap 3886591 3886589 3886587 CATCACCGCCAGATA CCCGACTTCT CTA AGAAGTCGGG TATCTTAAATCGCTA TERM 3535 3886591 - 3886613 + r 100 -16.4 -3.1082 | opp_overlap 3886591, overlap 3886589 3886587 CATCACCGCCAGATA CCCGACTTCT CTA AGAAGTCGGG TATCTTAAATCGCTA Ava_3131 3888320 - 3886626 - | hypothetical protein TERM 3536 3888434 - 3888420 - H 81 -7.2 -4.60041 | ATTTATGTGTAAAAA TTAGCA ATT TGCTAA CAATAAGTAATTAAA Ava_3132 3888835 - 3889146 + | RNA-binding region RNP-1 TERM 3537 3889212 - 3889233 + T 95 -10.9 -4.45068 | opp_overlap 3889211 TTGCAATTAATAATG GCTCAGGCA GAAA TGCTTGAGC TTTCTTATTGGGAAT Ava_3133 3890129 - 3889260 - | polyphosphate:AMP phosphotransferase TERM 3538 3890026 - 3890036 + g 82 -6.8 -4.79223 | GCCTGTAATTTTTGG GCTG CTT CAGC TTTTTCGTGATATCC Ava_3134 3890684 - 3890202 - | hypothetical protein TERM 3539 3891173 - 3891158 - g 70 -7.6 -3.68726 | AATATTTTAATAGAA GGTAGT GGAA ACTACC TCAGCCGTACTTTTG Ava_3135 3890921 - 3892795 + | hypothetical protein Ava_3136 3893762 - 3892899 - | nicotinate-nucleotide pyrophosphorylase TERM 3540 3894034 - 3894020 - H 85 -2.8 -5.92399 | CAAGAAAATAAAAAA CACC AGGCTGA GGTG GATAAAGAGCAGTCA TERM 3541 3895122 - 3895136 + H 75 -5.6 -4.8622 | GGTTAAGTCCCGCAA CGAGCG CAA CCCTCG TTTTTAGTTGCCAGC TERM 3542 3896580 - 3896569 - H 75 -7.2 -4.2354 | GAAAGGTGAAAAGAA CCCC GCAA GGGG AGTGAAATAGAACAT TERM 3543 3897400 - 3897372 - H 75 -9.5 -3.23274 | opp_overlap 3897393, overlap 3897355 3897367 TTGGTGAGAATCCAA TGCCCCGAAACCC TAA GGGTTCCAGAGCC AGGTTCGTCCACTCT TERM 3544 3898767 - 3898755 - H 71 -9.1 -3.1634 | GCTGAAAGCATCTAA GTGGG AAG CCCAC CTCAAGATGAGTGCT TERM 3545 3899093 - 3899115 + H 100 -9.9 -5.45802 | opp_overlap 3899093 TAATTTAAGCAAAAA CCCCCTTTT CATAC AGAAGGGGG TTTTTGTTTTGGGCA TERM 3546 3899115 - 3899093 - H 89 -7.7 -4.90013 | opp_overlap 3899093 TAATTTAAGCAAAAA CCCCCTTTT CATAC AGAAGGGGG TTTTTGTTTTGGGCA Ava_3137 3899394 - 3900686 + | hypothetical protein Ava_3138 3900840 - 3902489 + | pseudouridine synthase Ava_3139 3903097 - 3902597 - | 4-hydroxybenzoyl-CoA thioesterase Ava_3140 3903211 - 3903465 + | hypothetical protein TERM 3547 3904052 - 3904039 - g 76 -6.7 -4.5287 | overlap 3904034 GCAAAGTAACTAAAA CCGTA GCTT TACGG CAAGCTCAAACAGCT Ava_3141 3903600 - 3904178 + | hypothetical protein Ava_3142 3904779 - 3904435 - | hypothetical protein Ava_3143 3905018 - 3904770 - | hypothetical protein TERM 3548 3905412 - 3905430 + r 79 -3.1 -5.45726 | overlap 3905414 3905415 AACTAAAGATAAGTG TGTTGCC ATTTC GGCAGTA TTTTTTTAGGCTCTA Ava_3144 3905970 - 3905755 - | hypothetical protein Ava_3145 3907652 - 3906096 - | hypothetical protein Ava_3146 3907801 - 3908763 + | peptidase M48, Ste24p Ava_3147 3909012 - 3909440 + | hypothetical protein TERM 3549 3909673 - 3909716 + T 100 -22.2 -2.53715 | gap 1, opp_overlap 3909682, overlap 3909682 GTGTGGTTTTCCACC TC-TAATTAACGTGAGTCTCC GAC GGAGACTCACGTTAATTACGA ATTAGTAATGATGGC TERM 3550 3909706 - 3909682 - T 100 -18.7 -3.34895 | opp_overlap 3909673 3909682 TCCACCTCTAATTAA CGTGAGTCTCC GAC GGAGACTCACG TTAATTACGAATTAG TERM 3551 3909682 - 3909706 + T 100 -18.7 -3.35867 | opp_overlap 3909682, overlap 3909673 TCCACCTCTAATTAA CGTGAGTCTCC GAC GGAGACTCACG TTAATTACGAATTAG Ava_3148 3911235 - 3909754 - | hemolysin-type calcium-binding region TERM 3552 3911361 - 3911339 - R 75 -5.6 -4.72272 | opp_overlap 3911344 3911349, overlap 3911344 CGGTTTCATTAAAAA TAAAACCCTG CAA CAGAGTTTTT CTGATGTTCAATACT TERM 3553 3911356 - 3911344 - R 86 -5.5 -5.3104 | opp_overlap 3911344 3911349, overlap 3911339 TCATTAAAAATAAAA CCCTG CAA CAGAG TTTTTCTGATGTTCA TERM 3554 3911344 - 3911356 + r 70 -3.3 -4.98436 | opp_overlap 3911344 3911339, overlap 3911349 TCATTAAAAATAAAA CCCTG CAA CAGAG TTTTTCTGATGTTCA Ava_3149 3912053 - 3911496 - | hypothetical protein TERM 3555 3912692 - 3912706 + G 79 -8.6 -4.07618 | TGCCAAGCGCTACCG TCAACG CTA CGTTGA TTTAATTGTTAACCC lysS 3912207 - 3913892 + | lysyl-tRNA synthetase TERM 3556 3913918 - 3913951 + F 100 -9.1 -5.24551 | gap 1, opp_overlap 3913916, overlap 3913920 AGAAAATAAAATTTC AAGGGTGATTTAGGTA AAA TA-CTAAATCACCCTA TTTTTATTAATTTGG TERM 3557 3913920 - 3913949 + F 91 -11.7 -4.23353 | gap 1, opp_overlap 3913916, overlap 3913918 AAAATAAAATTTCAA GGGTGATTTAGGTA AAA TA-CTAAATCACCC TATTTTTATTAATTT Ava_3151 3914100 - 3914366 + | hypothetical protein Ava_3152 3914363 - 3914599 + | hypothetical protein TERM 3558 3914644 - 3914617 - f 85 -7.1 -5.02201 | opp_overlap 3914615 AAAAGATGAGAAAAA TAGCCCAAGAT ATGTTA ATTTTGGGCTA GGTATTACAATATTT TERM 3559 3915237 - 3915227 - g 71 -4 -4.81814 | opp_overlap 3915227 ACTAGTACAAGAAAA CAAA TAT TTTG TTCTGCGGATAAAAA Ava_3153 3914670 - 3915692 + | transposase IS4 TERM 3560 3916027 - 3915994 - T 95 -7.6 -5.35224 | gap 1, opp_overlap 3915994 3915997 TTCACAAAAACAAAA TAAGGTGCGTTATGG TTTTG CCA-AACCCACCTTA TTTCTCACAAATGAC TERM 3561 3915994 - 3916027 + T 77 -8.3 -3.86897 | gap 1, opp_overlap 3915994, overlap 3915997 TTCACAAAAACAAAA TAAGGTGCGTTATGGT TTT GCCA-AACCCACCTTA TTTCTCACAAATGAC Ava_3154 3916649 - 3916056 - | hypothetical protein Ava_3155 3916835 - 3917476 + | hypothetical protein TERM 3562 3917670 - 3917683 + G 70 -9.5 -2.77523 | overlap 3917667 3917666 CTATTGCATCCTGTA GCCGC CAGT GCGGC TGATATTACTCAACA TERM 3563 3918532 - 3918496 - g 72 -9.6 -3.11341 | gap 1, opp_overlap 3918497 3918498, overlap 3918495 3918498 3918500 3918523 AATCCTACGCAAAAT TATACGAGCAGCTAGGT AACT ACCCAACCGCTCGTA-A TTTTTACGAAAGAGC TERM 3564 3918531 - 3918498 - g 100 -14.7 -3.11208 | opp_overlap 3918497 3918498, overlap 3918496 3918495 3918500 3918523 TCCTACGCAAAATTA TACGAGCAGCTAGGT AACT ACCCAACCGCTCGTA ATTTTTACGAAAGAG TERM 3565 3918529 - 3918500 - g 95 -12.9 -3.11281 | opp_overlap 3918498 3918497, overlap 3918498 3918496 3918495 3918523 CTACGCAAAATTATA CGAGCAGCTAGGT AACT ACCCAACCGCTCG TAATTTTTACGAAAG Ava_3156 3917574 - 3918647 + | tetratricopeptide TPR_4 Ava_3157 3919502 - 3918669 - | hypothetical protein Ava_3158 3920297 - 3919818 - | hypothetical protein Ava_3159 3921915 - 3920488 - | periplasmic sensor Signal transduction histidine kinase Ava_3160 3922446 - 3924017 + | hemolysin-type calcium-binding region TERM 3566 3924106 - 3924124 + F 84 -11 -3.48395 | ATATAGCTCTTGTGG GATGGGCT TCT AGCCCGTC TTGTGTCGGCAAGAT TERM 3567 3924290 - 3924273 - f 79 -8.5 -4.07568 | opp_overlap 3924276, overlap 3924256 3924276 TTTTGGTTCCCAAAA TAAGGAC TAAA GTCCTTA CTACGAGCTTATTCA TERM 3568 3924398 - 3924383 - f 79 -4.8 -5.20735 | GTAAGAAAAAAGAAA TAAGTA CTAT TACTTA TCATGAATATAGTAA Ava_3161 3924527 - 3925111 + | hypothetical protein Ava_3162 3925401 - 3925946 + | hypothetical protein TERM 3569 3926029 - 3926048 + G 72 -7.8 -3.83154 | GGGCTGAGTATCTTA GCAACAGC GAGC GCAGTTGC TTTAGCTTGTAATTC Ava_3163 3925969 - 3926940 + | hypothetical protein TERM 3570 3926938 - 3926964 + F 73 -2.2 -5.33921 | opp_overlap 3926938 3926940, overlap 3926940 CCCAGACGCACAAGA TAGCATTTGTTG GTA CATCAACTGCGA TTTTTTAATTGATTT TERM 3571 3927657 - 3927646 - g 75 -5.8 -4.65153 | overlap 3927640 CTACAGAAATCAAAA CACC TCTA GGTG CTGTGAAACTAGCGT TERM 3572 3927752 - 3927735 - g 71 -2 -5.22006 | opp_overlap 3927742, overlap 3927742 TTATTACAAGAAAAA CTCAAT ACCACA ATCGAG TTGAGGTCTTTAGAA TERM 3573 3929724 - 3929734 + G 71 -8.2 -3.57263 | opp_overlap 3929713 GATAGTGCAGGTCTG CCCG TAC CGGG TTTAGCGGTAGAACT Ava_3164 3927057 - 3929999 + | Cna B-type TERM 3574 3930057 - 3930038 - f 76 -5.8 -4.5774 | opp_overlap 3930038, overlap 3930043 TATGAATAAGGAAAA GCAAAGAT AAAA ATCTTTAC CTTTTGGGAAAATTT TERM 3575 3931308 - 3931335 + G 79 -7.8 -4.24342 | opp_overlap 3931307 3931309, overlap 3931309 TAGAGGAAGGTAAAG ACTTTTTCTCGG TCAT TCGAGAAAAAGA TTTGTTCGTACACCA TERM 3576 3931309 - 3931334 + G 84 -11.3 -3.14284 | opp_overlap 3931309 3931307, overlap 3931308 AGAGGAAGGTAAAGA CTTTTTCTCGG TCAT TCGAGAAAAAG ATTTGTTCGTACACC TERM 3577 3931334 - 3931309 - g 80 -10.6 -3.47928 | opp_overlap 3931308 3931309, overlap 3931307 AGAGGAAGGTAAAGA CTTTTTCTCG GTCATT CGAGAAAAAG ATTTGTTCGTACACC Ava_3165 3930224 - 3932434 + | polyphosphate kinase Ava_3166 3932593 - 3933003 + | response regulator receiver domain-containing protein Ava_3167 3933306 - 3933124 - | hypothetical protein TERM 3578 3933756 - 3933725 - g 90 -7.4 -5.10933 | opp_overlap 3933735 TCACCCAAAATAAAA TCCGTAAAGATATC ACTC GATATTGTTACGGA CAGAATGCTCACTTA Ava_3168 3933475 - 3934050 + | hypothetical protein Ava_3169 3934327 - 3934067 - | hypothetical protein TERM 3579 3934183 - 3934232 + g 100 -14.5 -4.51699 | AATCTAATTTTTGTA GCTCAAGGGGTAAATCCGAAAAA TTAA TTTTTTGTAATTCCCCCTTGAGC TTTTCTAGTAATTCT Ava_3170 3935211 - 3936245 + | response regulator receiver modulated diguanylate cyclase Ava_3171 3937494 - 3936289 - | adaptive-response sensory kinase Ava_3172 3937619 - 3939118 + | hypothetical protein TERM 3580 3939211 - 3939190 - f 74 -5.1 -4.72007 | TGTTACTAAAACAAA CTCCACCCC CAAA GGAATAGAG TTTTTTATTTGGTAA TERM 3581 3939269 - 3939303 + F 71 -8.7 -3.14344 | opp_overlap 3939269, overlap 3939274 AGTACCAGTTATTAA TTTAATGTGAGTCTC CAACA GAGGCGCACGTTAAA TTAATAACCGAGGTG TERM 3582 3939489 - 3939515 + F 71 -4.4 -4.85782 | overlap 3939490 GCCGGGAAGGGATTT TGTACTCTTGGA TAA TCTTAGAGTGCG TTTGTTTTTAGGAGC TERM 3583 3939930 - 3939878 - f 80 -10.3 -3.31054 | gap 1, opp_overlap 3939878 3939878, overlap 3939879 AAACAATAGGATTAA TTGCGTAGTGAGAATTTTAGTCCT TTTTTG AGAACTAAAGTTCTCACTACA-AA CATTTAATTATTTAC TERM 3584 3939930 - 3939879 - f 82 -11.9 -2.57548 | opp_overlap 3939878 3939878, overlap 3939878 AACAATAGGATTAAT TGCGTAGTGAGAATTTTAGTCCT TTTTTG AGAACTAAAGTTCTCACTACAAA CATTTAATTATTTAC Ava_3173 3940014 - 3941990 + | AMP-dependent synthetase and ligase Ava_3174 3942033 - 3942485 + | hypothetical protein Ava_3175 3943066 - 3942542 - | hypothetical protein TERM 3585 3943569 - 3943557 - g 74 -7.7 -3.93136 | opp_overlap 3943556 ATATGGATGTAGAAA CCTTC TAC GAAGG GTATCTCGCTCACAT Ava_3176 3943406 - 3944704 + | branched-chain alpha-keto acid dehydrogenase subunit E2 TERM 3586 3944763 - 3944706 - f 75 -8.6 -3.63627 | gap 3, overlap 3944707 CTTTGACACTGTAAA GGCGGTA-GGGGTGTAAGGGTGA-ATTTC TGT GTATTCTCACCCCTACGCCCCATACC-CC TATACCCCCAACCTC Ava_3177 3944819 - 3945517 + | TPR repeat-containing protein TERM 3587 3945591 - 3945608 + F 79 -8.5 -4.08692 | opp_overlap 3945585 3945593 CTTTCAAGATGTGAA CATCCTT CACA AAGGATG TTTTCGCCCAGATTC Ava_3178 3945844 - 3947502 + | hypothetical protein TERM 3588 3947521 - 3947576 + T 100 -8.6 -5.53288 | opp_overlap 3947527, overlap 3947522 3947523 GCAAGGGGAAGTTAT TA-GAAATTCCAAGCGCCAGACCAAG AATATA CTTG-TCTGGCGCTTGAAATATCGTG TTTTTTTAACTTAGG TERM 3589 3947522 - 3947574 + T 95 -11.5 -4.40173 | gap 1, opp_overlap 3947527, overlap 3947521 3947523 CAAGGGGAAGTTATT AGAAATTCCAAGCGCCAGACCAAG AATATA CTTG-TCTGGCGCTTGAAATATCG TGTTTTTTTAACTTA TERM 3590 3947523 - 3947573 + T 100 -15 -3.22477 | gap 1, opp_overlap 3947527, overlap 3947522 3947521 AAGGGGAAGTTATTA GAAATTCCAAGCGCCAGACCAAG AATATA CTTG-TCTGGCGCTTGAAATATC GTGTTTTTTTAACTT TERM 3591 3947569 - 3947527 - T 100 -16.6 -3.99405 | gap 1, opp_overlap 3947523 3947522 3947521 GGAAGTTATTAGAAA TTCCAAGCGCCAGACCAAG AATATA CTTG-TCTGGCGCTTGAAA TATCGTGTTTTTTTA Ava_3179 3948148 - 3947882 - | hypothetical protein TERM 3592 3948223 - 3948207 - R 72 -9.5 -2.62983 | CTCAGTGGTAGAGCA GCTGATT CGT AATCAGC AGGCCGTGGGTTCAA Ava_3180 3949278 - 3948331 - | type II site-specific deoxyribonuclease Ava_3181 3950726 - 3949278 - | site-specific DNA-methyltransferase (cytosine-specific) Ava_3182 3951977 - 3950937 - | peptidases M20 and M42 TERM 3593 3952125 - 3952098 - R 91 -11.5 -4.20817 | CATATTTTAAAATAA TTGCTCATTCA ATTATG TGAATGAGCAA GAGACAGCTAATAAT Ava_3183 3953206 - 3952157 - | lipolytic protein Ava_3184 3955119 - 3953782 - | S-layer region-like Ava_3185 3956110 - 3955262 - | hypothetical protein TERM 3594 3955834 - 3955818 - G 71 -6.6 -4.12188 | overlap 3955798 3955797 TGATGAGGTTCAAAA GGTAAG GGTAA CTTACC AAAACCAATGACTGG Ava_3186 3956580 - 3959144 + | DNA mismatch repair protein Ava_3187 3959852 - 3959157 - | Crp/FNR family transcriptional regulator Ava_3188 3960116 - 3961750 + | hydroxylamine reductase Ava_3189 3962951 - 3961881 - | hypothetical protein TERM 3595 3963057 - 3963068 + r 89 -5.8 -5.28481 | ATTGACTATTGACCA CCCT CAGA AGGG TTTTTTAATTCAGTG TERM 3596 3963135 - 3963114 - R 100 -10.2 -6.17669 | opp_overlap 3963111 3963109 3963114 AACAAAACAAAAAAA GGGGATGA TTTTTG TCATCCCC TGCTATTTGCTGATA TERM 3597 3963114 - 3963135 + r 79 -10.9 -2.88215 | opp_overlap 3963114, overlap 3963111 3963109 AACAAAACAAAAAAA GGGGATGAT TTTT GTCATCCCC TGCTATTTGCTGATA Ava_3190 3965048 - 3963162 - | FtsH peptidase Ava_3191 3965862 - 3965368 - | hypothetical protein TERM 3598 3965969 - 3965982 + H 76 -3.1 -5.26875 | GTGTGGAAATTGATT TTGGT CGCA ACCGA TTTTTTAATTGAAGG Ava_3192 3966194 - 3967111 + | histone deacetylase superfamily protein Ava_3193 3967627 - 3968766 + | glutamate--cysteine ligase, putative Ava_3194 3968996 - 3969457 + | RNA methyltransferase TrmH, group 2 TERM 3599 3969610 - 3969597 - f 86 -5.3 -5.252 | overlap 3969606 TATTTTGATAAAAAA CAGTA TAAA TACTG AAAAGTACCCTAAAA TERM 3600 3969686 - 3969713 + F 76 -9.4 -3.34398 | opp_overlap 3969688 3969690, overlap 3969685 AACCGCAACTGGAAT GATAGATTTTGA TGAA TTAAAATCTATC TATTTCGGGAAACAA Ava_3195 3970284 - 3972548 + | peptidoglycan-binding LysM TERM 3601 3972588 - 3972611 + T 100 -12.5 -5.47846 | ATTTCTTTATTTATG GAGGGGGTT TACTTT AACCCCCTC TTTTATTTTTTAGTT mraW 3973538 - 3972621 - | S-adenosyl-methyltransferase MraW TERM 3602 3973186 - 3973174 - G 72 -6.2 -4.37711 | opp_overlap 3973174 TGACGAAAGCTAAAA CCCC GTTCT GGGG TATCTAGGTGATAAG Ava_3197 3975595 - 3973691 - | Zn-dependent protease with chaperone function-like Ava_3198 3976067 - 3977251 + | NAD(P)H-quinone oxidoreductase subunit H Ava_3199 3979024 - 3977354 - | hypothetical protein Ava_3200 3979926 - 3979021 - | putative esterase Ava_3201 3980878 - 3979940 - | putative esterase Ava_3202 3981715 - 3980891 - | Alpha/beta hydrolase fold Ava_3203 3981853 - 3982788 + | hypothetical protein TERM 3603 3982923 - 3982958 + F 79 -11.3 -2.8763 | gap 2, opp_overlap 3982933, overlap 3982921 3982918 AATAACTATCTTCGT GCC-TAACGCACCG-CC TTAC GGATGGTGCGTTACGGC TAAATTTTCTTGTCT TERM 3604 3983047 - 3983009 - f 77 -10.5 -2.83163 | opp_overlap 3983018, overlap 3983008 3983018 TAGCAGTAACACAAG GGCAATAAAGCGG-GAAGA ACA TCTACACCGCTTT-TTGCC TCCCCTACTTAATAT TERM 3605 3983018 - 3983039 + F 71 -5.1 -4.66609 | gap 1, opp_overlap 3983018 3983009 3983008 CACAAGGGCAATAAA GCGG-GAAGA ACA TCTACACCGC TTTTTGCCTCCCCTA Ava_3204 3983240 - 3983779 + | sensor protein TERM 3606 3984810 - 3984796 - g 71 -4.2 -4.82901 | TGTGGCCTAGAAAAA CTCGGT TTT ACCCAG CAAGCTCTATTTTTA Ava_3205 3983821 - 3985035 + | hypothetical protein TERM 3607 3985271 - 3985287 + F 73 -7.3 -4.07568 | GGCATCTTGCTTTCA GTTGTCA TTA TGGCAAC TTTTGCCGCAGGAGG Ava_3206 3985463 - 3986311 + | 6-phosphogluconate dehydrogenase, NAD-binding Ava_3207 3987714 - 3986356 - | histidine kinase TERM 3608 3987546 - 3987534 - G 72 -6.3 -4.25104 | opp_overlap 3987535 3987538, overlap 3987535 3987537 CCTGTTCTAGCAAAA TTACC CCT GGTAA CAAGGGATATTTATC TERM 3609 3988709 - 3988725 + G 71 -2.1 -5.14563 | opp_overlap 3988700, overlap 3988710 ATGCAAGGAGTACCT ACACCCG TAG CGGTTGG TTTTTTACTAGCAGC Ava_3208 3988460 - 3989512 + | permease Ava_3209 3989602 - 3990360 + | hypothetical protein TERM 3610 3990910 - 3990898 - g 75 -3.3 -5.1523 | opp_overlap 3990902, overlap 3990902 TCTAGAACAGAAAAA GGTAC TTA GTCCC AAAGACTTAGTTGTG Ava_3210 3990410 - 3991900 + | hypothetical protein Ava_3211 3992400 - 3992017 - | hypothetical protein Ava_3212 3992973 - 3994529 + | hypothetical protein TERM 3611 3994573 - 3994534 - T 80 -11 -3.18728 | gap 1, opp_overlap 3994536 3994544 ATGGTCAATAGCTAA TAGTCCACAGTCCAAAAAC CTG GATTTTG-ACTATGGACTA TTGACAAAAAAGCCA Ava_3213 3995950 - 3994814 - | phosphoribosylformylglycinamidine cyclo-ligase TERM 3612 3995249 - 3995263 + g 91 -7.8 -4.84311 | CGCTGCCCATAACTC CTGCCC ACT GGGTAG TTTTGTTCTGTAGCC Ava_3214 3998306 - 3996129 - | hypothetical protein TERM 3613 3998667 - 3998633 - g 74 -9.4 -3.25719 | opp_overlap 3998641, overlap 3998641 3998645 3998648 CTAGCAGATGACCAA TTACTAGACCAACAAC AAC GTCGTTGGTTAAGTAA ACTCGTGACCCAGGT TERM 3614 3998659 - 3998641 - g 70 -9.6 -2.87136 | opp_overlap 3998641, overlap 3998633 3998645 3998648 TGACCAATTACTAGA CCAACAAC AAC GTCGTTGG TTAAGTAAACTCGTG Ava_3215 3998468 - 3998701 + | hypothetical protein TERM 3615 3998802 - 3998756 - T 70 -8.9 -2.95339 | gap 1, opp_overlap 3998789 3998800, overlap 3998780 AGAAAATTGTACAGA CGCGATTAATCACATCTCTGAC AATT GT-ACAGACGCGATTTATCGCG TCTCTAACCAGACGC TERM 3616 3998800 - 3998817 + T 75 -7 -4.2558 | opp_overlap 3998756 3998780, overlap 3998789 CAGACGCGATTTATC GCGTCT CTAACC AGACGC TTTTACTGCCGCCTC Ava_3216 4000539 - 3998806 - | alpha-isopropylmalate/homocitrate synthase family transferase TERM 3617 4000146 - 4000132 - G 78 -4.2 -5.1287 | opp_overlap 4000144, overlap 4000134 TTGAGAGCGAAAAAA CTCGAT AGT ATCGCG GATCATCGCTAAGTT Ava_3217 4000615 - 4000953 + | ferredoxin Ava_3218 4000974 - 4001444 + | hypothetical protein thiG 4001598 - 4003556 + | thiazole synthase Ava_3220 4003745 - 4003924 + | hypothetical protein TERM 3618 4003961 - 4003986 + F 100 -9.1 -5.58522 | TATTTATTATTACTT CAGGTTCTAAA TTTT TTGAGAACCTG TTTTTATTTTGTATG TERM 3619 4006177 - 4006197 + G 74 -7 -4.25256 | CTTGGGACTCGCCCA TTATCAGT TAGTC ACTGATAA TTATTTTAGTGGAGA Ava_3221 4004216 - 4006429 + | hypothetical protein Ava_3222 4007194 - 4008108 + | hypothetical protein Ava_3223 4009213 - 4008311 - | Alpha/beta hydrolase fold Ava_3224 4009667 - 4009233 - | Fe-S metabolism associated SufE TERM 3620 4009731 - 4009777 + r 73 -8.9 -3.29511 | gap 1, opp_overlap 4009748, overlap 4009735 4009738 TTGGTCAATGGTCAG TTGTCAGTTGTCAGAGACGCGA TTAA TCGCGTCTGT-ACAATTGTCAG TTGTGAAGCAGTGCG TERM 3621 4009735 - 4009773 + r 76 -10.5 -2.59431 | gap 1, opp_overlap 4009748, overlap 4009731 4009738 TCAATGGTCAGTTGT CAGTTGTCAGAGACGCGA TTAA TCGCGTCTGT-ACAATTG TCAGTTGTGAAGCAG TERM 3622 4009738 - 4009770 + r 73 -8.6 -3.45054 | gap 1, opp_overlap 4009748, overlap 4009735 4009731 ATGGTCAGTTGTCAG TTGTCAGAGACGCGA TTAA TCGCGTCTGT-ACAA TTGTCAGTTGTGAAG Ava_3225 4010278 - 4009913 - | dihydroneopterin aldolase family protein Ava_3226 4012331 - 4010379 - | multi-sensor Signal transduction histidine kinase TERM 3623 4010480 - 4010470 - G 78 -5.4 -5.01042 | AAGTCAAACCAAAAA GTAG TAC CTAC CCCTACTTCACTGAC TERM 3624 4011765 - 4011746 - G 100 -10 -5.11112 | AAATCGTAATAAAAA CCGCAATG GTGA CATCGCGG GTAAAATTGGTGGAG Ava_3227 4013753 - 4012476 - | phosphoribosylamine--glycine ligase TERM 3625 4013575 - 4013563 - G 84 -5.5 -5.34309 | ACCACCAAAGAAAAA CCCTG ATT CAAGG CATATTGGCTAATTC TERM 3626 4014194 - 4014140 - H 82 -12.2 -2.54504 | opp_overlap 4014167, overlap 4014165 4014168 4014171 ATTTTTGAAATATAG GTATGGTGGTCAATGTCCACCAAA ATAATGA TACGGTGGGCATTGCCCACCCTAC AAATACTTAGATTTG TERM 3627 4014199 - 4014165 - H 73 -6.4 -4.2679 | opp_overlap 4014167, overlap 4014140 4014168 4014171 CAATGTCCACCAAAA TAATGATACGGTGGGC ATT GCCCACCCTACAAATA CTTAGATTTGTTCAA TERM 3628 4014195 - 4014168 - H 86 -9.2 -4.25256 | gap 1, opp_overlap 4014167, overlap 4014140 4014165 4014171 TGTCCACCAAAATAA TGATACGGTGGGC ATT GCCCACCCTA-CA AATACTTAGATTTGT TERM 3629 4014193 - 4014171 - H 87 -12 -3.12766 | opp_overlap 4014167, overlap 4014140 4014168 4014165 CCACCAAAATAATGA TACGGTGGGC ATT GCCCACCCTA CAAATACTTAGATTT Ava_3228 4014268 - 4015218 + | 3-beta hydroxysteroid dehydrogenase/isomerase Ava_3229 4015586 - 4015248 - | hypothetical protein Ava_3230 4016245 - 4015661 - | HAD family hydrolase Ava_3231 4017269 - 4016289 - | phosphoribose diphosphate:decaprenyl-phosphate phosphoribosyltransferase TERM 3630 4017858 - 4017831 - g 100 -10.6 -4.9792 | overlap 4017832 TACGGCAGAGAAAAA GGAGATGAGAGC GATC GCCCTCATCTCA AAGAACTAATCATGG TERM 3631 4017857 - 4017832 - g 100 -14.1 -3.58029 | overlap 4017831 ACGGCAGAGAAAAAG GAGATGAGAGC GATC GCCCTCATCTC AAAGAACTAATCATG Ava_3232 4017540 - 4017950 + | hypothetical protein Ava_3233 4021837 - 4017956 - | hypothetical protein TERM 3632 4020106 - 4020093 - G 71 -3.1 -5.01845 | CACAATAACCAAAAA CTAAC AACA GCTAG TCCTAAACCGATATA TERM 3633 4021656 - 4021672 + g 73 -8.7 -3.41125 | ACTACCCTTTCTGGT TCCCGGA CAG TCTGGGA TTGTAACTCTATCCG TERM 3634 4022372 - 4022391 + r 93 -7.8 -5.243 | opp_overlap 4022372 GACTTCTCCTAATCA CCTCGGTT ACGT AGCCGGGG TTTTTTCGTCATTTA Ava_3234 4023301 - 4022414 - | diguanylate cyclase TERM 3635 4023977 - 4023952 - H 93 -11.9 -4.13767 | opp_overlap 4023952 GCTTTCATCTTAAAA CCCTTGTGAGG TAAG CCTTACAAGGG TTTTTTGTGTTTATA TERM 3636 4023952 - 4023977 + H 100 -14.1 -5.59879 | opp_overlap 4023952 GCTTTCATCTTAAAA CCCTTGTGAGG TAAG CCTTACAAGGG TTTTTTGTGTTTATA Ava_3235 4024118 - 4025305 + | Phage integrase Ava_3236 4025355 - 4026089 + | hypothetical protein Ava_3237 4026140 - 4026406 + | hypothetical protein TERM 3637 4026769 - 4026756 - g 72 -8.1 -3.83324 | GCACAAACAGGCAAA GGAGC AAAT GCTCC TACAATTGACGTAGC TERM 3638 4027646 - 4027635 - g 70 -3.6 -4.83169 | overlap 4027641 ATCGCTCCAGAAAAA CACC AACA GGCG ATCGCCCAACCATCA Ava_3238 4026735 - 4029578 + | hypothetical protein Ava_3239 4029657 - 4029812 + | hypothetical protein TERM 3639 4030207 - 4030193 - g 77 -6.4 -4.66163 | overlap 4030194 ACTGCTACGGAAAAA CTGCTG GTG CAGCAA GTGGCAATGGGGTGG Ava_3240 4029980 - 4030567 + | hypothetical protein Ava_3241 4031218 - 4030787 - | hypothetical protein Ava_3242 4031436 - 4031720 + | plasmid maintenance system killer Ava_3243 4031735 - 4032043 + | plasmid maintenance system antidote protein Ava_3244 4034471 - 4032072 - | signal transduction protein Ava_3245 4034906 - 4034628 - | hypothetical protein Ava_3246 4034959 - 4035888 + | peptidase C14, caspase catalytic subunit p20 TERM 3640 4035953 - 4035939 - f 76 -4.4 -5.24129 | overlap 4035921 TTTGTTTATAAAAAA TAAAAA TGA TTTTTA GAGATATGTAATTAT TERM 3641 4037312 - 4037299 - g 80 -3.9 -5.38958 | AGCTACAAAGAAAAA TTCAA CAGA TTGAA TTAGAAATAGAGAGT Ava_3247 4036083 - 4039481 + | superfamily I DNA/RNA helicase Ava_3248 4040728 - 4039478 - | hypothetical protein Ava_3249 4040956 - 4041675 + | hypothetical protein Ava_3250 4041672 - 4042106 + | hypothetical protein TERM 3642 4042619 - 4042608 - g 70 -3.6 -4.84529 | opp_overlap 4042618 TGAGAAACTCAAAAA GCAG AAAG CCGC TTTGGAAAAAGCTAT Ava_3251 4042372 - 4046496 + | chromosome segregation ATPase-like Ava_3252 4046496 - 4047422 + | hypothetical protein TERM 3643 4053176 - 4053163 - g 74 -6.7 -4.4017 | TCAACGTTTACAAAA CTTGC GATC GCAAG CTCGACCTGTAGAGG Ava_3253 4047419 - 4053700 + | DEAD/DEAH box helicase-like Ava_3254 4054812 - 4053718 - | RNA-directed DNA polymerase (Reverse transcriptase) Ava_3255 4056107 - 4055043 - | TPR repeat-containing protein TERM 3644 4056923 - 4056942 + G 84 -10.8 -3.68619 | TTCTTCCTATGATGC CCAAACTC CGTC GAGTTTGG TTTGAGTCACTTGAC Ava_3256 4056742 - 4057503 + | hypothetical protein Ava_3257 4057548 - 4058144 + | hypothetical protein Ava_3258 4058163 - 4058714 + | hypothetical protein Ava_3259 4059371 - 4058985 - | HNH endonuclease Ava_3260 4060107 - 4059466 - | hypothetical protein Ava_3261 4060642 - 4060448 - | hypothetical protein TERM 3645 4060707 - 4060682 - R 90 -8.9 -4.66938 | ATTTCCAAGACAAAA GCCAGCCTACT GTGA AGGTGGCTGGC AAGAAATATCATTTT Ava_3262 4061106 - 4060774 - | hypothetical protein Ava_3263 4061660 - 4061106 - | hypothetical protein Ava_3264 4061778 - 4061993 + | hypothetical protein TERM 3646 4062106 - 4062057 - f 75 -10.2 -2.8294 | gap 1, opp_overlap 4062056 4062055 CATTTTTCACAAGCA GTAGGGGCGGGTTAAC-CA AGATAGTGGTGAA TGAGTAAACCCGCCCCTAC AATCTTTAGACTCCA TERM 3647 4065616 - 4065604 - g 74 -7.7 -4.02253 | CTAATAATGTACAAA CTGCT ACT AGCAG CAACACCACCATTCA Ava_3265 4062912 - 4072541 + | Ig family protein TERM 3648 4072813 - 4072827 + T 70 -8.6 -3.10545 | overlap 4072809 CTATGATGTCTTCAT GATGTC AAT GACATC TGCTTTTACGGTGTA Ava_3266 4073201 - 4072857 - | hypothetical protein Ava_3267 4074991 - 4073318 - | restriction modification system DNA specificity subunit TERM 3649 4074289 - 4074307 + g 80 -4.6 -5.18726 | TTGAGAGGAGGCGAT CGCATT TCTCTAC AATGCG TTTTTGTTCTGCAAG Ava_3268 4075327 - 4075109 - | hypothetical protein Ava_3269 4075744 - 4075343 - | PilT protein-like Ava_3270 4076001 - 4075741 - | hypothetical protein TERM 3650 4076046 - 4076076 + r 100 -13.4 -3.89957 | opp_overlap 4076041 TAGCAAACGATTTCA GATCCCCGACTTCT TTA AGAAGTTGGGAATC TTGTTAATTATTACC Ava_3271 4077519 - 4076080 - | putative RNA methylase Ava_3272 4078519 - 4077527 - | hypothetical protein Ava_3273 4080875 - 4078545 - | hypothetical protein Ava_3274 4081370 - 4081122 - | AbrB family transcriptional regulator Ava_3275 4085862 - 4081438 - | pentapeptide repeat-containing protein TERM 3651 4086334 - 4086359 + H 100 -12.7 -4.81083 | opp_overlap 4086334 GCTTTCATCTTAAAA CCCTTGTGAGT TAAC ACTTACAAGGG TTTTTCGTAGTTAGA TERM 3652 4086359 - 4086334 - H 89 -10.5 -4.13767 | opp_overlap 4086334 GCTTTCATCTTAAAA CCCTTGTGAGT TAAC ACTTACAAGGG TTTTTCGTAGTTAGA Ava_3276 4086415 - 4086723 + | hypothetical protein Ava_3277 4090032 - 4086796 - | SNF2-related helicase TERM 3653 4089695 - 4089669 - G 93 -8.8 -4.42464 | opp_overlap 4089677 AAGGTTGTAAATAAA CTTCAGAGTCTG CAT CAGATTCTAAAG CGGCAGAATGCACAG Ava_3278 4090159 - 4090707 + | GCN5-related N-acetyltransferase Ava_3279 4090876 - 4093032 + | polynucleotide phosphorylase/polyadenylase TERM 3654 4093070 - 4093038 - f 72 -9.3 -2.65279 | opp_overlap 4093036 4093035, overlap 4093035 4093034 4093064 4093065 GAATCGTTAAATCGA TTGGGGATTTTAGAT ATT ATCTAAAATCCGCGA TGCCTCTTTACGTAG TERM 3655 4093094 - 4093065 - f 75 -9.3 -3.13109 | opp_overlap 4093036 4093035 4093076, overlap 4093038 4093035 4093034 4093064 GATATTATCTAAAAT CCGCGATGCCT CTTTACGT AGGCATCGCCG TAAAGTTTTTCATTA TERM 3656 4093076 - 4093099 + F 72 -3.8 -5.01845 | opp_overlap 4093065 4093064 AAATCCGCGATGCCT CTTTACGTAG GCAT CGCCGTAAAG TTTTTCATTATTGTG Ava_3280 4093260 - 4093523 + | hypothetical protein Ava_3281 4094018 - 4093569 - | resolvase, RNase H-like fold Ava_3282 4095826 - 4094336 - | hypothetical protein Ava_3283 4096825 - 4096154 - | Crp/FNR family transcriptional regulator TERM 3657 4096211 - 4096223 + g 71 -4.1 -4.82901 | AATCTTCTTTTTGTG GATGG AAA TCATC TTTTTCTCCCGCAGA Ava_3284 4097487 - 4098281 + | enoyl-(acyl carrier protein) reductase hisB 4098424 - 4099053 + | imidazoleglycerol-phosphate dehydratase TERM 3658 4099398 - 4099414 + G 73 -5.1 -4.58773 | GGCTGTTCTTTGACG GTTTACC AGG GGGAAAC TTTTGGTTTACTAGG Ava_3286 4099251 - 4100243 + | ABC transporter-like Ava_3287 4100694 - 4102172 + | polysaccharide export protein TERM 3659 4102179 - 4102212 + F 89 -10.3 -4.12279 | GGACTTTAATCTTTC TCTGGGGACGTAAGT AATT AGTTTCGTCCCCGGA TTTCCTTTGAATTTA TERM 3660 4102239 - 4102258 + F 73 -3.5 -5.10526 | overlap 4102240 TTTATCAGAGCAGTT GGGCGAT AGTGCG ATCGCCA TTTATTTTTTAATAT TERM 3661 4102401 - 4102381 - f 70 -2.6 -5.14965 | AGCGTCAGCAAAAAA GTAATTGT GTTTT ACCATTAC CAGTTACCGTTCGGC TERM 3662 4102524 - 4102504 - f 74 -9.7 -2.67512 | opp_overlap 4102504, overlap 4102500 ATAGACTTAAATGTA GGGCATGGT AGT ACCATGTCC TTTAAACTAAAATTG TERM 3663 4102504 - 4102524 + F 90 -11.9 -3.61103 | opp_overlap 4102504 4102500 ATAGACTTAAATGTA GGGCATGGT AGT ACCATGTCC TTTAAACTAAAATTG Ava_3288 4102564 - 4103400 + | SPFH domain-containing protein/band 7 family protein Ava_3289 4104296 - 4103433 - | dihydropteroate synthase TERM 3664 4103910 - 4103893 - G 71 -7 -4.13945 | opp_overlap 4103893 4103892 ATTGGTACGCCAAAA GTTGCC ACTGTG GGCAAC ATTTGGGGGTCAAAT TERM 3665 4104272 - 4104244 - G 72 -7.3 -4.01902 | overlap 4104247 ACACCCATTAAATAA GTACGCTGTCCCC AGT GGAAACAGCGATC GCCTATGATCAATTT TERM 3666 4104269 - 4104247 - G 86 -12 -3.05069 | overlap 4104244 CCCATTAAATAAGTA CGCTGTCCCC AGT GGAAACAGCG ATCGCCTATGATCAA TERM 3667 4104324 - 4104378 + r 74 -10.2 -2.72559 | opp_overlap 4104331 4104333, overlap 4104331 4104362 TTGGTCATTAGTCAT TAGTCAATAGTCATTAGTCAACAGTT TTG GACTATGGACTACGGACTATTGACTG TAGATTATTTACTGA tpiA 4105112 - 4104387 - | triosephosphate isomerase Ava_3291 4105336 - 4106814 + | small GTP-binding protein domain-containing protein Ava_3292 4107265 - 4106882 - | hypothetical protein Ava_3293 4108094 - 4107453 - | hypothetical protein TERM 3668 4108367 - 4108341 - R 100 -13.2 -5.44721 | opp_overlap 4108340 4108339 ATGACGTGAAAAAAA TTGGAGTGATAA ATA TTACCACTCCAA GATTCTGAATAGAGG Ava_3294 4110444 - 4108402 - | elongation factor G TERM 3669 4110075 - 4110057 - G 70 -7.4 -3.90766 | opp_overlap 4110059 TATTCACAAAGACAA GATGGGGA ATT TCCCAATC GTCTAGGAATTTAAA TERM 3670 4110235 - 4110215 - G 76 -6.9 -4.41548 | GGACAGTCTATAAAA GTAAAACGA ATG TCGTTATAC TCAGCGCAGGCGGTG TERM 3671 4111140 - 4111150 + G 71 -6.8 -4.1585 | opp_overlap 4111140 GCATTGGAATTAGAA CCCA GGC TGGG TTTTGCACATTATAA Ava_3295 4110711 - 4111646 + | TPR repeat-containing protein Ava_3296 4111711 - 4112271 + | hypothetical protein TERM 3672 4112345 - 4112287 - T 72 -8.2 -3.58396 | TTGGAAATCAAAAAT CTCACGCATAGACACAAAAACCCAAA TAAAAAC TCTGCGCCTCCGCGCCTCTGCGTGAG ATAGCCTACCCTACT Ava_3297 4113336 - 4112359 - | delta-aminolevulinic acid dehydratase TERM 3673 4113631 - 4113644 + H 80 -6.7 -4.78149 | opp_overlap 4113631 TGAGATTTGACGAAA TAGGC GATC GCCTA TTTTTAAATTCTCAA TERM 3674 4113824 - 4113834 + H 84 -3.2 -5.75342 | opp_overlap 4113813, overlap 4113813 ATGAGCAACTGATTT GCTG ATT TAGC TTTTTTTTAAACACC TERM 3675 4113920 - 4113944 + H 80 -9.9 -3.53343 | opp_overlap 4113909 4113921 4113942, overlap 4113921 AAGACCCCTCTCCAA ACCTCTCCCCG AAG CGGAGAGAGGC TTTGAAACCCCCATT TERM 3676 4113943 - 4113921 - H 100 -15.6 -3.53563 | opp_overlap 4113920 4113921, overlap 4113909 4113942 AGACCCCTCTCCAAA CCTCTCCCCG AAG CGGAGAGAGG CTTTGAAACCCCCAT TERM 3677 4113921 - 4113943 + H 88 -13.4 -2.71791 | opp_overlap 4113909 4113921 4113942, overlap 4113920 AGACCCCTCTCCAAA CCTCTCCCCG AAG CGGAGAGAGG CTTTGAAACCCCCAT TERM 3678 4113978 - 4113952 - H 100 -16.6 -3.5525 | opp_overlap 4113944, overlap 4113942 AGAGAGGCTTTGAAA CCCCCATTCCCT TGT AGGGAAGGGGGG CTAGGGGGTTTAGGT TERM 3679 4115142 - 4115169 + G 70 -2.8 -4.95484 | gap 1, overlap 4115143 GAATTAGATTTAGAT TTGGTG-CATC AAGGCAA GATGACACCAG TTTTCTTTGGTAGTG TERM 3680 4115289 - 4115302 + G 82 -6.7 -4.81359 | opp_overlap 4115288 GTCGCCCCCACATAC CCAGA GTTT TCTGG TTTTGTCTTTAAATT prfC 4114401 - 4116023 + | peptide chain release factor 3 TERM 3681 4116601 - 4116578 - g 73 -3.8 -4.97888 | AAAAAAACGCAAAAA GCCGCAAAAT CCTG ATCATGCAGC CGCAGATACATCTCC Ava_3299 4116303 - 4118477 + | hypothetical protein TERM 3682 4118507 - 4118524 + F 79 -11.3 -3.07344 | opp_overlap 4118509, overlap 4118509 AGCGCAGCCTTTACA GACGCGA TTAA TCGCGTC TATATTAGCCAATGG TERM 3683 4118716 - 4118702 - f 81 -11.4 -2.69042 | opp_overlap 4118702, overlap 4118699 ACAGCAGCAAATCGA CCAGCC ACA GGCTGG TTTTTGTTTCTTTTA TERM 3684 4118702 - 4118716 + F 100 -11.4 -5.59962 | opp_overlap 4118702 4118699 ACAGCAGCAAATCGA CCAGCC ACA GGCTGG TTTTTGTTTCTTTTA Ava_3300 4119130 - 4119630 + | RNA-binding region RNP-1 TERM 3685 4119655 - 4119683 + F 88 -7.7 -4.81685 | opp_overlap 4119655, overlap 4119662 CTGAGAAATTAAAAA TTAAAAGTCAGAA TTT TTTTGATTTTTAA TTTTTAATCGTTAGT TERM 3686 4119683 - 4119655 - f 70 -3.3 -5.04601 | opp_overlap 4119655 4119662 CTGAGAAATTAAAAA TTAAAAGTCAGAA TTT TTTTGATTTTTAA TTTTTAATCGTTAGT TERM 3687 4119662 - 4119676 + F 74 -3.6 -5.1971 | opp_overlap 4119655, overlap 4119655 ATTAAAAATTAAAAG TCAGAA TTT TTTTGA TTTTTAATTTTTAAT TERM 3688 4120024 - 4120013 - f 76 -5.8 -4.66163 | AGTCGCACGGAAAAA GGCT TAAA AGCC ACCTGTTACCGGGGT TERM 3689 4120142 - 4120181 + F 85 -7.2 -4.98255 | gap 1, opp_overlap 4120140 TGAATAAAATTTATA CCCCTTGAGTCT-CAATGA ACA TCAGACTAGACTCAAGGGG TTTTTGTAGTTAGGG TERM 3690 4120391 - 4120412 + F 78 -8 -4.21194 | TTACTATTCTCTTAA CTCCATCC CCTTGT GGGTGGAG TTTTCGGTAATAGGG Ava_3301 4121245 - 4122513 + | glycosyl transferase, group 1 Ava_3302 4122768 - 4123559 + | hypothetical protein Ava_3303 4123726 - 4125465 + | hypothetical protein Ava_3304 4126102 - 4125572 - | hypothetical protein TERM 3691 4126267 - 4126241 - H 71 -5.2 -4.64676 | opp_overlap 4126241 4126246 GGATTGGGAAGAAAA GTTGACAGTTGA CAG TTAACTGTTAAC TAATGACCAAGTTAA TERM 3692 4127022 - 4127034 + G 76 -7.7 -4.13995 | AGAGCGGGTTATGCA CCATC GGC GATGG TTTCCTTTATGCAGA Ava_3305 4126377 - 4127213 + | peptidase M48, Ste24p TERM 3693 4127271 - 4127226 - T 78 -9.2 -3.51699 | gap 1, opp_overlap 4127254 4127256, overlap 4127224 4127247 TAAAAACAGACAACA GACGCGATTAATCGCTAAC AACTGTACA GAC-GCGATTAATCGCGTC TCTAACAAAACACAT TERM 3694 4127328 - 4127349 + T 70 -6.5 -4.02119 | GAATTTTTTAGGCGC GCTGTTTGC TACT GCGAACCGC TATTTTCTTATGATC Ava_3306 4128075 - 4127320 - | metallophosphoesterase TERM 3695 4128340 - 4128316 - H 74 -8.5 -3.70102 | opp_overlap 4128319 4128335, overlap 4128319 ATTCAAAATTAAAGA CAACCACCCAC AAG GGGGGTGCTTG AACCCAACAAGCATT TERM 3696 4128335 - 4128353 + H 81 -4.6 -5.39681 | opp_overlap 4128316 CACCCACAAGGGGGG TGCTTG AACCCAA CAAGCA TTTTTCTTTCCTTCT Ava_3307 4128479 - 4128763 + | hypothetical protein Ava_3308 4130677 - 4128872 - | Serine/threonine protein kinase TERM 3697 4130763 - 4130774 + H 71 -4.4 -4.79955 | ATGCAAGATATCCCA TTGC TATG GCAA TTTTGTTGTAGCTAT TERM 3698 4130849 - 4130836 - H 70 -8.1 -3.33151 | opp_overlap 4130836, overlap 4130834 4130830 TGGGTGAAATGAAGA CGCGA TTAA TCGCG TATCTACAGATGGTT TERM 3699 4130963 - 4131002 + H 76 -8 -4.08767 | gap 1, opp_overlap 4130968 4130970 TCAGGGCTGTCCATA GTCAAGAGTCCAGAGTTAG AGG CTAGCT-TGGACTGTGGAC TTTTGACAACCTGAG Ava_3309 4131150 - 4131716 + | hypothetical protein Ava_3310 4133550 - 4131859 - | Serine/threonine protein kinase TERM 3700 4133622 - 4133651 + H 74 -7.9 -3.86015 | opp_overlap 4133622 4133630, overlap 4133626 4133627 4133630 4133646 TTGCGGGTGTAATTA TTTAGAGACGCGA TTAA TCGCGTCTGTACA TTTGTAAGAGACGTG TERM 3701 4133627 - 4133679 + H 100 -14.4 -3.36128 | gap 1, opp_overlap 4133622 4133630 4133661 4133663, overlap 4133626 4133622 4133630 4133646 4133654 GGTGTAATTATTTAG AGACGCGATTAATCGCGTCT-GTAC ATTT GTAAGAGACGTGATTAGTCGCGTCC TTACATTTGTCATTT TERM 3702 4133676 - 4133630 - H 78 -10.3 -2.93435 | gap 1, opp_overlap 4133626 4133622 4133627 4133630 4133646 4133654, overlap 4133622 4133661 4133663 GTAATTATTTAGAGA CGCGATTAATCGCGTCT-GTAC ATTT GTAAGAGACGTGATTAGTCGCG TCCTTACATTTGTCA TERM 3703 4133630 - 4133676 + H 100 -14.7 -2.83346 | gap 1, opp_overlap 4133622 4133630 4133661 4133663, overlap 4133626 4133622 4133627 4133646 4133654 GTAATTATTTAGAGA CGCGATTAATCGCGTCT-GTAC ATTT GTAAGAGACGTGATTAGTCGCG TCCTTACATTTGTCA TERM 3704 4133654 - 4133684 + H 86 -9.9 -4.24747 | gap 1, opp_overlap 4133630 4133661 4133663, overlap 4133630 4133627 4133646 TCGCGTCTGTACATT TGTAAGAGACGTGA TTAG TCGCGTC-CTTACA TTTGTCATTTGTTTT TERM 3705 4133937 - 4133925 - H 90 -9.1 -4.57209 | opp_overlap 4133924 4133923, overlap 4133918 AGATGAACGACAAAA TGCCC ATT GGGCA AGCTTTTTCTGATAA TERM 3706 4134511 - 4134501 - g 75 -2.4 -5.34381 | opp_overlap 4134506 AAACGCAAAGAAAAA TCCG GTG CGGG ATTCCAAGATGGGAT TERM 3707 4135689 - 4135673 - g 86 -7.9 -4.63486 | ACGCCTGGAAGAAAA CTGGGGG CCG CCACCAG GGAACCTCAACAGCG TERM 3708 4137868 - 4137850 - g 77 -8.2 -3.98683 | overlap 4137851 AGGACACCAACGAAA CCTTCATC AAA GATGAAGA AATGCAGAAACGGTT TERM 3709 4137867 - 4137851 - g 71 -9.5 -2.98487 | overlap 4137850 GGACACCAACGAAAC CTTCATC AAA GATGAAG AAATGCAGAAACGGT Ava_3311 4134048 - 4138034 + | magnesium chelatase TERM 3710 4138071 - 4138042 - f 89 -12.3 -3.34242 | opp_overlap 4138044, overlap 4138035 4138044 TAGAATAACCATCAA GATAGAGACGTTC TGTA GAACGTCTCTATT TTTTTATGCGTGTTT TERM 3711 4138044 - 4138069 + F 100 -14.9 -5.65177 | opp_overlap 4138042 4138035 4138044 GAATAACCATCAAGA TAGAGACGTTC TGTA GAACGTCTCTA TTTTTTTATGCGTGT TERM 3712 4138069 - 4138044 - f 100 -14.9 -3.22756 | opp_overlap 4138044, overlap 4138042 4138035 GAATAACCATCAAGA TAGAGACGTTC TGTA GAACGTCTCTA TTTTTTTATGCGTGT Ava_3312 4138140 - 4138559 + | fdxN element excision controlling factor protein Ava_3313 4138547 - 4138882 + | fdxN element excision controlling factor protein TERM 3713 4139115 - 4139073 - f 71 -4.2 -4.82128 | opp_overlap 4139084, overlap 4139066 4139080 TGAGTAAATATAAAA CTTATAATATAGCCGTAGCT AGA AGCTATGGCTATATAAACAA TGTGACCTAAAAATC TERM 3714 4139108 - 4139080 - f 100 -13.3 -3.54903 | opp_overlap 4139084, overlap 4139073 ATATAAAACTTATAA TATAGCCGTAGCT AGA AGCTATGGCTATA TAAACAATGTGACCT TERM 3715 4139084 - 4139104 + F 84 -11.9 -2.88249 | opp_overlap 4139080 4139073 AAAACTTATAATATA GCCGTAGCT AGA AGCTATGGC TATATAAACAATGTG TERM 3716 4139146 - 4139161 + F 95 -10.4 -4.66609 | opp_overlap 4139146 4139143 AACTGAAGAAATTTA GCCTGC TTAT GCAGGC TTTTTACGTGAAGTC TERM 3717 4139161 - 4139146 - f 77 -10.4 -2.76941 | opp_overlap 4139146, overlap 4139143 AACTGAAGAAATTTA GCCTGC TTAT GCAGGC TTTTTACGTGAAGTC Ava_3315 4139371 - 4140591 + | hypothetical protein TERM 3718 4140772 - 4140813 + F 73 -9.5 -2.75993 | opp_overlap 4140772 4140771 4140768 4140775, overlap 4140771 4140768 4140775 TTCAGCGTAAATAAC TGATGGCACTCTACACATT CATG AGTGTGGAGAGTGCGATCC CTTATCTCTCCATAC TERM 3719 4140775 - 4140810 + F 74 -9.8 -2.64877 | opp_overlap 4140772 4140771 4140768 4140775, overlap 4140772 4140771 4140768 AGCGTAAATAACTGA TGGCACTCTACACATT CATG AGTGTGGAGAGTGCGA TCCCTTATCTCTCCA TERM 3720 4140877 - 4140925 + F 78 -9.7 -3.31983 | gap 1, opp_overlap 4140865 4140861 4140885 4140886 4140889, overlap 4140861 4140878 4140885 4140924 CAATCGCTTATCTCT CCATACAAGCGATCGC-CTTTG GCAATA CGGAGTGCGATCGCTTGTACGA TTAGTATAATCTATC TERM 3721 4140878 - 4140924 + F 88 -13.2 -2.58708 | gap 1, opp_overlap 4140865 4140861 4140885 4140886 4140889, overlap 4140861 4140877 4140885 AATCGCTTATCTCTC CATACAAGCGATCGC-CTTTG GCAATA CGGAGTGCGATCGCTTGTACG ATTAGTATAATCTAT TERM 3722 4140885 - 4140917 + F 70 -8.5 -3.37732 | gap 1, opp_overlap 4140865 4140861 4140885 4140886 4140889, overlap 4140861 4140878 4140877 TATCTCTCCATACAA GCGATCGC-CTTTG GCAATA CGGAGTGCGATCGC TTGTACGATTAGTAT Ava_3316 4140963 - 4141154 + | fdxN element excision controlling factor XisH Ava_3317 4141228 - 4141611 + | transposase Ava_3318 4141653 - 4142021 + | transposase IS4 Ava_3319 4142076 - 4142291 + | fdxN element excision controlling factor XisH Ava_3320 4142279 - 4142620 + | XisI protein-like Ava_3321 4142761 - 4143027 + | hypothetical protein Ava_3322 4143011 - 4143223 + | hypothetical protein Ava_3323 4143511 - 4143278 - | hypothetical protein Ava_3324 4144161 - 4143718 - | PilT protein-like Ava_3325 4144370 - 4144149 - | hypothetical protein TERM 3723 4144881 - 4144871 - g 75 -5.4 -4.77983 | AACAGACGAACAAAA GGAA AAG TTCC CCCCTATTTGTCCTG Ava_3326 4144551 - 4145126 + | hypothetical protein Ava_3327 4145835 - 4145347 - | GCN5-related N-acetyltransferase TERM 3724 4145405 - 4145421 + g 70 -5.1 -4.56597 | TCCAAGTCTGCAACT TGGGG TAAATAT CCCCA TTTTTGAAAGCCGAA TERM 3725 4145492 - 4145482 - G 77 -4.6 -4.91852 | opp_overlap 4145491 GTGAGCAAAAATAAA CCCC AAT AGGG TTTTTAAACCTAAAT TERM 3726 4145893 - 4145916 + H 88 -7.6 -4.87389 | opp_overlap 4145893 AATACATCTTTAATA GTAATAATTC TATG GGATTATTAC TTTATTTTTACAATG Ava_3328 4146350 - 4147273 + | hypothetical protein Ava_3329 4148239 - 4147295 - | Ap4A phosphorylase II TERM 3727 4148338 - 4148289 - H 84 -11.2 -3.56844 | gap 1, opp_overlap 4148294 4148295 4148302, overlap 4148302 CCGAGGAATTAAACA CAAAACTTA-AAAACTCCACTCA TAAAC TGAGCGGAGTTTTGTAAATTTTA TTTGCCTAAATTGTT TERM 3728 4148294 - 4148333 + H 74 -4.5 -4.90778 | gap 1, opp_overlap 4148289 4148302, overlap 4148295 4148302 GAATTAAACACAAAA CTTA-AAAACTCCACTCA TAAAC TGAGCGGAGTTTTGTAAA TTTTATTTGCCTAAA TERM 3729 4148302 - 4148324 + H 84 -7.7 -4.5538 | opp_overlap 4148289 4148302, overlap 4148295 4148294 CACAAAACTTAAAAA CTCCACTCA TAAAC TGAGCGGAG TTTTGTAAATTTTAT TERM 3730 4148324 - 4148302 - H 100 -9.9 -4.89729 | opp_overlap 4148302 4148295 4148294, overlap 4148289 CACAAAACTTAAAAA CTCCACTCA TAAAC TGAGCGGAG TTTTGTAAATTTTAT Ava_3330 4148853 - 4149578 + | phosphoadenylylsulfate reductase (thioredoxin) TERM 3731 4149578 - 4149556 - f 74 -4.9 -4.80178 | opp_overlap 4149561 GAGGAAGCAATAAAA CTGAATGTG GGATT CACATTTAG TCAGTGGTCAGTAGT Ava_3331 4149701 - 4150939 + | exonuclease SbcD Ava_3332 4151058 - 4152503 + | PUCC protein Ava_3333 4152590 - 4153396 + | inositol monophosphatase TERM 3732 4153417 - 4153466 + F 100 -8.7 -4.89852 | opp_overlap 4153420, overlap 4153418 4153420 TACATACTTTTTTAT CAACCCAGGTTGCCTGTAA TCACAAAAAATT TTACAGGCGACCTGGGTAA TTTTTCTGGATATGA TERM 3733 4153418 - 4153465 + F 90 -12.2 -3.53188 | opp_overlap 4153420, overlap 4153417 4153420 ACATACTTTTTTATC AACCCAGGTTGCCTGTAA TCACAAAAAATT TTACAGGCGACCTGGGTA ATTTTTCTGGATATG TERM 3734 4153463 - 4153420 - f 90 -12.6 -3.14683 | opp_overlap 4153420 4153418 4153417 ATACTTTTTTATCAA CCCAGGTTGCCTGTAA TCACAAAAAATT TTACAGGCGACCTGGG TAATTTTTCTGGATA TERM 3735 4153420 - 4153463 + F 100 -14.8 -3.32986 | opp_overlap 4153420, overlap 4153418 4153417 ATACTTTTTTATCAA CCCAGGTTGCCTGTAA TCACAAAAAATT TTACAGGCGACCTGGG TAATTTTTCTGGATA TERM 3736 4153639 - 4153649 + F 86 -5.4 -5.30686 | GTCATTGTTAAAGTC CTTG ATA CAAG TTTTTTCTAAATATT Ava_3334 4153678 - 4154229 + | hypothetical protein Ava_3335 4154571 - 4155134 + | hypothetical protein TERM 3737 4155382 - 4155393 + G 70 -3.6 -4.82901 | overlap 4155374 AATTAATGCTGTCTG CGGC TATT GTCG TTTTTGTCGGCGAGG Ava_3336 4155137 - 4156093 + | zinc-containing alcohol dehydrogenase superfamily protein Ava_3337 4156399 - 4156112 - | hypothetical protein Ava_3338 4157317 - 4156514 - | tropinone reductase Ava_3339 4158352 - 4157591 - | enoyl-CoA hydratase/isomerase Ava_3340 4159095 - 4158472 - | Crp/FNR family transcriptional regulator Ava_3341 4160170 - 4159157 - | bacteriochlorophyll/chlorophyll a synthase Ava_3342 4161493 - 4160393 - | anion-transporting ATPase TERM 3738 4161178 - 4161193 + g 70 -7.6 -3.63515 | AGGCGCTGTCCATCC CTGGTA ATAC TACCAG TTCTTGACCGTACAC Ava_3343 4161772 - 4161578 - | hypothetical protein Ava_3344 4161965 - 4162735 + | hypothetical protein Ava_3345 4162759 - 4163070 + | hypothetical protein Ava_3346 4163271 - 4164077 + | hypothetical protein TERM 3739 4164159 - 4164126 - g 74 -9.8 -3.17075 | opp_overlap 4164124 4164126 4164129, overlap 4164129 4164156 TGGCGGCGAACCCAA GAAGAGTTTTCTTA TGACCT CAAGAAAACTCTCC TGTCTTTGATAGAAG TERM 3740 4164156 - 4164129 - g 70 -7.9 -3.73068 | opp_overlap 4164129 4164126 4164124, overlap 4164126 CGGCGAACCCAAGAA GAGTTTTCTTA TGACCT CAAGAAAACTC TCCTGTCTTTGATAG Ava_3347 4164078 - 4164818 + | ABC transporter-like TERM 3741 4165316 - 4165327 + G 85 -4.4 -5.5208 | TCCATATGAACCTTT GGAA GCAA TTCC TTTTTTCTATTCTAA TERM 3742 4166420 - 4166430 + G 76 -6.8 -4.56597 | TAAGCTTGCCTTTAA CAGG TTG CCTG TTTTTCAGAAAAAAA TERM 3743 4168074 - 4168057 - g 74 -4.1 -5.00196 | GCGCAAATAATAAAA GAGGCTT AGTT AACCCTC ATGCTCGCGCATTTT Ava_3348 4164993 - 4168217 + | glycosyl transferase family protein Ava_3349 4168201 - 4169421 + | glycosyl transferase, group 1 TERM 3744 4169859 - 4169869 + G 70 -5.4 -4.48221 | CAGTTAATTTTCTAA TCTC ATC GAGA TTTTCTAAGTTAATC Ava_3350 4169531 - 4170838 + | hypothetical protein TERM 3745 4171173 - 4171187 + G 77 -6.4 -4.62904 | CTCTTTATCATGTTT CTGCTG GAC TAGCAG TTTTTACGCGTGTTT Ava_3351 4170932 - 4172236 + | glycosyl transferase family protein Ava_3352 4172229 - 4173296 + | 3-beta hydroxysteroid dehydrogenase/isomerase TERM 3746 4173633 - 4173605 - g 93 -12.5 -2.92463 | CTCATTATCCATACA GCAGCGCAACCAT CCC ATGATTGGGCTGC AAAAGACCCCCACAC Ava_3353 4173332 - 4174414 + | NAD-dependent epimerase/dehydratase Ava_3354 4174450 - 4174995 + | dTDP-4-dehydrorhamnose 3,5-epimerase TERM 3747 4175775 - 4175795 + G 71 -6.9 -4.10161 | opp_overlap 4175789 CCTATTCTGTCCTAG CTTGTGAGA AAA TGTCACAAG TTTTGGGAACTGCTC Ava_3355 4174988 - 4175878 + | 3-beta hydroxysteroid dehydrogenase/isomerase Ava_3356 4175875 - 4176951 + | glucose-1-phosphate thymidylyltransferase, short form Ava_3357 4177123 - 4178151 + | glycosyl transferase family protein TERM 3748 4178882 - 4178861 - g 93 -4.3 -5.86061 | overlap 4178863 CTCTATGAAAAAAAA TGCCAACGC TACG GCGATGGAA TATAGACGTAGCCAA Ava_3358 4178154 - 4179038 + | glycosyl transferase family protein Ava_3359 4179079 - 4179798 + | hypothetical protein Ava_3360 4180002 - 4181069 + | glycosyl transferase, group 1 Ava_3361 4183524 - 4181206 - | ATP-dependent DNA helicase Rep Ava_3362 4185342 - 4183615 - | periplasmic sensor Signal transduction histidine kinase TERM 3749 4184336 - 4184352 + g 80 -8.7 -4.04773 | overlap 4184348 ATACTTTTTGCTTTG CTGGCTG CTT CAGCTAG TTCTTTAGCTTGTTC Ava_3363 4186372 - 4185770 - | hypothetical protein TERM 3750 4185959 - 4185971 + g 70 -7.7 -3.65529 | AGCAACTTTGATCGC TGCTG TGT CAGCA TTTAACTCAGACTCT TERM 3751 4186264 - 4186280 + g 71 -4.4 -4.86902 | opp_overlap 4186264, overlap 4186259 AGGGCAAAGGAAAAA TCGGGT CAATT ACCTGA TTTTGTTCTGGTTTG Ava_3364 4186611 - 4186871 + | hypothetical protein TERM 3752 4186895 - 4186877 - T 93 -6.7 -5.7946 | opp_overlap 4186877 TTTGCAATAAAAAAA GCCCTCT TGTAT AGAGAGC TTTGGTTAACATTAA Ava_3365 4188547 - 4186928 - | S-layer region-like TERM 3753 4187471 - 4187458 - G 82 -6.7 -4.75404 | AAACCTGACCAAAAA TGGCA TTGT TGCCA TCAAATAAACCATTT Ava_3366 4189304 - 4188678 - | Crp/FNR family transcriptional regulator TERM 3754 4189535 - 4189561 + r 73 -6.8 -4.3129 | opp_overlap 4189535 4189539, overlap 4189539 AAAATAAACAATAAA TAAAGTATTTTT AGT AAACATACTTTA TTTTAATAGTCCATC TERM 3755 4189561 - 4189535 - R 80 -6.8 -4.73617 | opp_overlap 4189535 4189539, overlap 4189539 AAAATAAACAATAAA TAAAGTATTTTT AGT AAACATACTTTA TTTTAATAGTCCATC TERM 3756 4190020 - 4189998 - R 93 -4 -6.09888 | opp_overlap 4189998 CTTTAATAAAAAAAA TCCCGCTCCT GGG AGGGATGGGA TTCGCTAAAAAATAC Ava_3367 4190715 - 4190047 - | phosphate uptake regulator, PhoU TERM 3757 4190468 - 4190450 - G 70 -7.4 -3.77014 | opp_overlap 4190446 4190441, overlap 4190441 ATAAAAGCACTCAAA CAGCGCAA ATC TTGGGCTG TAGGTGCTTGTAATG Ava_3368 4192069 - 4190765 - | histidine kinase Ava_3369 4192880 - 4192128 - | two component transcriptional regulator TERM 3758 4193054 - 4193015 - H 75 -9.5 -3.25472 | gap 1, opp_overlap 4193022, overlap 4193022 ACACTGCCAAATATA CCATAAATCGCTCT-AGC TACAC GCTCAGAGCAATTTCTGG AGTGCAATAGCTCTA Ava_3370 4193429 - 4194412 + | hypothetical protein TERM 3759 4195020 - 4195009 - g 85 -5.8 -5.24291 | AAAATCAAAATAAAA CTCG ACAA CGAG ATAATGCAGAGTACA Ava_3371 4194465 - 4195544 + | hypothetical protein TERM 3760 4195597 - 4195566 - T 100 -11.9 -5.11254 | opp_overlap 4195572, overlap 4195572 AATAATAAAAATAAA TAAAAAGACGTAA TTTTCG TTACGTCTTTTTA AAATGTAAACACATT TERM 3761 4195572 - 4195591 + T 81 -7.2 -4.64766 | opp_overlap 4195572 4195566 AAAAATAAATAAAAA GACGTAAT TTTC GTTACGTC TTTTTAAAATGTAAA TERM 3762 4195591 - 4195572 - T 93 -6.5 -5.63012 | opp_overlap 4195572, overlap 4195566 AAAAATAAATAAAAA GACGTAA TTTTCG TTACGTC TTTTTAAAATGTAAA TERM 3763 4195650 - 4195663 + T 88 -3.1 -5.86465 | GTTTTATCTGGTTTT CCATT ATTG AGTGG TTTTTTTCTATTCTT TERM 3764 4195860 - 4195833 - T 90 -7.1 -5.16132 | opp_overlap 4195835 4195837 CATAGTAAAATAAAA TAGAGACGTTA TAATAT TTACGTCTCTA TGTCCAAGGAAACCC Ava_3372 4196940 - 4196167 - | 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase Ava_3373 4197287 - 4196997 - | hypothetical protein Ava_3374 4197671 - 4197363 - | hypothetical protein Ava_3375 4197856 - 4198902 + | polysaccharide pyruvyl transferase Ava_3376 4200019 - 4199021 - | FAD-dependent pyridine nucleotide-disulphide oxidoreductase Ava_3377 4200642 - 4200106 - | cytochrome b6-f complex iron-sulfur subunit Ava_3378 4200930 - 4202219 + | sulfide-quinone reductase Ava_3379 4202243 - 4202407 + | hypothetical protein TERM 3765 4202615 - 4202596 - f 71 -5 -4.62772 | overlap 4202597 GGCAAACTAAATAAA CCTAACAG CACA CTGTCAGA AGGAAGCCGCAAAGC Ava_3380 4202678 - 4203010 + | hypothetical protein Ava_3381 4203221 - 4204957 + | hypothetical protein TERM 3766 4205046 - 4205062 + G 91 -7.9 -4.77438 | opp_overlap 4205029 4205046 AGGATGATTACTATA TCGACCC TGA GGGGCGA TTTTTCATCGTCGCT Ava_3382 4204976 - 4205698 + | protein serine/threonine phosphatase TERM 3767 4205775 - 4205789 + F 76 -5 -4.93696 | ATATACTCAGCAATT TGTTCA ACC TGAGCA TTTTTCCTATTTGCA Ava_3383 4206261 - 4206458 + | phycobilisome degradation protein; NblA Ava_3384 4208480 - 4206918 - | Serine/threonine protein kinase TERM 3768 4206997 - 4207011 + g 80 -6.4 -4.84363 | overlap 4206998 TTAAGTTTTTCATAT TCTCCT TTG AGGAGG TTTTTACTCATTTGG TERM 3769 4207475 - 4207502 + g 95 -7.6 -4.98103 | opp_overlap 4207469 TGTAAATAGTGTTAT CCTGAGGTGCGG ATAA CAGCACATCGGG TTTTATCTTTTGTTC TERM 3770 4208497 - 4208487 - R 73 -5.4 -4.60797 | opp_overlap 4208487, overlap 4208482 GTCTGACATAGAAAA TTGG ACT CCAA TATTCAACAATGGTG Ava_3385 4209363 - 4208920 - | hypothetical protein TERM 3771 4209464 - 4209494 + r 100 -15.6 -3.29511 | opp_overlap 4209466, overlap 4209466 GTGGTCAATAGAGAC AATAGAGACGTTGC ACT GCAACGTCTCTATA TTGTCCCCAAATCCC TERM 3772 4209492 - 4209466 - R 100 -18.2 -3.68962 | opp_overlap 4209466 4209464 GGTCAATAGAGACAA TAGAGACGTTGC ACT GCAACGTCTCTA TATTGTCCCCAAATC TERM 3773 4209466 - 4209492 + r 100 -18.2 -3.21593 | opp_overlap 4209466, overlap 4209464 GGTCAATAGAGACAA TAGAGACGTTGC ACT GCAACGTCTCTA TATTGTCCCCAAATC anmK 4210699 - 4209521 - | anhydro-N-acetylmuramic acid kinase TERM 3774 4211287 - 4211275 - g 70 -7.7 -3.65522 | TATTGATTTCAACAA TGGTG TAG CACCA ACCACAGGTTTTGCT TERM 3775 4211822 - 4211812 - g 81 -5.4 -5.09762 | ACGTCAACACAAAAA GCAA AAA TTGC AAAGTGCTAGCAAAT Ava_3387 4211081 - 4211842 + | hypothetical protein TERM 3776 4211896 - 4211931 + T 74 -2.7 -5.4182 | gap 1, overlap 4211899 TAAATAGAGATTATT TTTTCTCCATGATGCT TTTAC AGTGTC-TGGAGATAA TTTTTATTTATAGTT TERM 3777 4211974 - 4211988 + T 76 -6.4 -4.37886 | CAGTATGAGTAATTT CCTGGT ACA ACTAGG TTTTCTCGCAAGTAG Ava_3388 4214417 - 4212090 - | phosphoenolpyruvate synthase TERM 3778 4214846 - 4214788 - H 100 -22.7 -3.35597 | gap 2, opp_overlap 4214790, overlap 4214790 4214791 4214816 4214817 TTGATTTCTGAAATA TACGTAGGGTGGGCATCGCCCACCAAAAC CAT GATACGGTGGGCGATGCCCACCCTAC--A GATACTTAAATATTT TERM 3779 4214846 - 4214790 - H 100 -32.5 -3.24708 | opp_overlap 4214790, overlap 4214788 4214791 4214816 4214817 GATTTCTGAAATATA CGTAGGGTGGGCATCGCCCACCAAAAC CAT GATACGGTGGGCGATGCCCACCCTACA GATACTTAAATATTT TERM 3780 4214790 - 4214848 + H 100 -21.9 -2.81509 | gap 2, opp_overlap 4214788 4214790 4214791 4214816 4214817 GATTTCTGAAATATA -C-GTAGGGTGGGCATCGCCCACCAAAAC CAT GATACGGTGGGCGATGCCCACCCTACAGA TACTTAAATATTTTC TERM 3781 4214845 - 4214791 - H 100 -33.8 -2.54504 | opp_overlap 4214790, overlap 4214788 4214790 4214816 4214817 ATTTCTGAAATATAC GTAGGGTGGGCATCGCCCACCAAAAC CAT GATACGGTGGGCGATGCCCACCCTAC AGATACTTAAATATT TERM 3782 4215028 - 4215018 - H 81 -2.6 -5.63517 | CTTTTAAATAAAAAA TATA CAA TATA AATAGAATGTTTTTC TERM 3783 4215146 - 4215159 + G 74 -4.5 -4.75309 | AGACGATTTTTTCAA GCTGA TCTT TCGGC TTTTCTTAGCTTTAC Ava_3389 4215105 - 4215560 + | MgtC/SapB transporter Ava_3390 4215985 - 4215557 - | hypothetical protein recF 4217209 - 4216079 - | recombination protein F Ava_3392 4220203 - 4217342 - | ATPase, E1-E2 type Ava_3393 4220633 - 4222312 + | transglutaminase-like TERM 3784 4222462 - 4222412 - f 72 -8.5 -3.49951 | gap 1, opp_overlap 4222424 TACACTGTCAGATAA TTAAGGGTAATC-GATTGTCGAAG TCTG CATCGATAACCTGATTTCCCTTAA AACAAAGTCAAATTT Ava_3394 4222478 - 4223125 + | hypothetical protein Ava_3395 4224189 - 4223251 - | hypothetical protein Ava_3396 4224196 - 4224900 + | NLP/P60 Ava_3397 4224915 - 4225928 + | glycosyl transferase family protein TERM 3785 4225954 - 4225965 + F 91 -4.4 -5.7946 | opp_overlap 4225954 TTAATCAAGAAGAAA TCAG AATT CTGA TTTTTTTGTTAACAA TERM 3786 4226498 - 4226509 + G 81 -4.4 -5.3104 | ATCTACAAGCTTCAA TTGG TTAT CCAA TTTTATTTTTAATAG TERM 3787 4227064 - 4227074 + G 73 -5.4 -4.71426 | ATTGCGATCGCTGCC CCTA TTT TAGG TTTTATTGCTGAAGC Ava_3398 4226008 - 4227243 + | general substrate transporter TERM 3788 4227255 - 4227285 + F 100 -17.2 -2.87132 | opp_overlap 4227255 4227260, overlap 4227260 CTAGTCAGGCAAAAA TAAAAGCAGAGAAA ATG TTTCTCTGCTTTTA TCTCTAAAACGGGCG TERM 3789 4227285 - 4227255 - f 100 -17.2 -4.67353 | opp_overlap 4227255 4227260, overlap 4227260 CTAGTCAGGCAAAAA TAAAAGCAGAGAAA ATG TTTCTCTGCTTTTA TCTCTAAAACGGGCG TERM 3790 4227260 - 4227280 + F 100 -12.7 -4.60797 | opp_overlap 4227260 4227255, overlap 4227255 CAGGCAAAAATAAAA GCAGAGAAA ATG TTTCTCTGC TTTTATCTCTAAAAC TERM 3791 4227280 - 4227260 - f 100 -12.7 -5.2853 | opp_overlap 4227255 4227260, overlap 4227255 CAGGCAAAAATAAAA GCAGAGAAA ATG TTTCTCTGC TTTTATCTCTAAAAC TERM 3792 4227904 - 4227872 - g 100 -12.2 -4.28994 | GATTAGTTAGTAAAA CTGGTGGAAAATCA GGAGA TTATTTTCCACCAG CACCATAATTTAATC moaC 4227406 - 4227912 + | molybdenum cofactor biosynthesis protein C Ava_3400 4228111 - 4227914 - | hypothetical protein Ava_3401 4228410 - 4229597 + | hypothetical protein TERM 3793 4229888 - 4229911 + G 73 -5.2 -4.71426 | opp_overlap 4229889, overlap 4229889 TTATTTGGACGAATT AGCTTCATCC TTGG GGGTGGAGCA TTTTATTCATAAACC TERM 3794 4229889 - 4229910 + G 73 -8.7 -3.42374 | opp_overlap 4229889, overlap 4229888 TATTTGGACGAATTA GCTTCATCC TTGG GGGTGGAGC ATTTTATTCATAAAC Ava_3402 4229604 - 4229987 + | response regulator receiver domain-containing protein Ava_3403 4230299 - 4230556 + | hypothetical protein TERM 3795 4230639 - 4230652 + F 80 -2.3 -5.71712 | AATGATTATTAGCCT GAGAG TTCG CGCTC TTTTTTTATATGGGG Ava_3404 4230676 - 4230984 + | hypothetical protein Ava_3405 4231309 - 4231527 + | hypothetical protein TERM 3796 4231544 - 4231574 + T 100 -18.6 -3.76373 | opp_overlap 4231544 TCTTTTGATAAAAAA TATCCCCGATTTTT TAG AAAAATCGGGGATA TTTGGCTATTAACAG TERM 3797 4231574 - 4231544 - T 100 -18.6 -5.24129 | opp_overlap 4231544 TCTTTTGATAAAAAA TATCCCCGATTTTT TAG AAAAATCGGGGATA TTTGGCTATTAACAG Ava_3406 4232077 - 4231607 - | hypothetical protein Ava_3407 4233215 - 4232175 - | cobalamin synthesis protein/P47K TERM 3798 4234107 - 4234118 + G 71 -3 -5.06414 | ACCTCAATTTTATTT TCTA TCGG TAGA TTTTTATTAGGACAA Ava_3408 4233438 - 4234337 + | ribonuclease BN Ava_3409 4234391 - 4234909 + | hypothetical protein TERM 3799 4235087 - 4235076 - g 82 -5.8 -5.04601 | TTTATAAACTAAAAA CCTG GCTT CAGG TGGAAATTGCAGTCT TERM 3800 4235758 - 4235748 - g 84 -5.4 -5.31456 | GCAATCTACAAAAAA CAGA CGT TCTG GAAGTAGAGGAATTT TERM 3801 4236262 - 4236237 - g 89 -10.5 -3.96148 | opp_overlap 4236228 4236227 TGTCTCCAGCAGAAA TTGCTGTGTGT TTTG ACCCACAGCAA CATCTCAAGCATTTG Ava_3410 4235012 - 4236307 + | adenylosuccinate lyase TERM 3802 4236487 - 4236505 + T 74 -9.6 -3.01854 | opp_overlap 4236487 4236500, overlap 4236486 4236499 4236500 TTTGATCCCCCTAAA TTCCCCTT CAA AAGGGGGA CTTTAATTCTAATTC TERM 3803 4236655 - 4236689 + T 77 -10 -3.17075 | opp_overlap 4236660 TTCAGGCTATTTATA TTTAAGCCCCTTCCCT TGT AGGGAAGGGGTTGGGG TTAGGTTCAACCAAA TERM 3804 4236684 - 4236660 - T 100 -14.3 -3.1355 | opp_overlap 4236655 GCTATTTATATTTAA GCCCCTTCCCT TGT AGGGAAGGGGT TGGGGTTAGGTTCAA Ava_3411 4237988 - 4236711 - | glycosyl transferase, group 1 TERM 3805 4238604 - 4238640 + r 95 -11.8 -4.49556 | gap 1, opp_overlap 4238616, overlap 4238605 4238608 GATGTGCTTGATTCT GGACTGTAGAGACGTTG CATG CAACGTCTCTACA-TCA TTTATTTGGTGCAAC TERM 3806 4238605 - 4238639 + r 100 -15.3 -3.29252 | gap 1, opp_overlap 4238616, overlap 4238604 4238608 ATGTGCTTGATTCTG GACTGTAGAGACGTTG CATG CAACGTCTCTACA-TC ATTTATTTGGTGCAA TERM 3807 4238608 - 4238637 + r 100 -18.1 -3.20639 | opp_overlap 4238616, overlap 4238605 4238604 TGCTTGATTCTGGAC TGTAGAGACGTTG CATG CAACGTCTCTACA TCATTTATTTGGTGC TERM 3808 4239080 - 4239095 + r 100 -10.4 -5.56673 | GACCCTTCTACGCTA GTCCGC TCAG GCGGAC TTTTTTGTTGTCAAT TERM 3809 4239393 - 4239427 + r 95 -13.1 -3.15758 | gap 1, opp_overlap 4239386 TTTATCAAGCGACGG GTTTTGTGA-CGGGGT CTCA ATCCCGGTCACAAAAC TTAATGGCCGATTGT Ava_3412 4239682 - 4239455 - | hypothetical protein TERM 3810 4240890 - 4240900 + G 73 -8.2 -3.67792 | overlap 4240889 GATTTGACTTTCTAT CCCC TGG GGGG TTTGGATGAGTGTAC TERM 3811 4241974 - 4241957 - g 73 -5.6 -4.56133 | CGGCAATAATGAAAA CGTAAC GTTGAT GTTACG AGAAGCAGAAGCCGG Ava_3413 4240074 - 4242425 + | TPR repeat-containing protein TERM 3812 4242497 - 4242532 + T 79 -10.6 -3.14132 | opp_overlap 4242522 TGGGTGTAGCGATAG CGGAACCCAACA AAGTCTTGAAAA TGTTGGGTTCCG TTCCTCCACCCAACC TERM 3813 4242654 - 4242619 - T 79 -10.4 -3.20326 | gap 1, overlap 4242614 4242612 TAAATACAGACCTAA CCCCCGACCCCTTCCCT ACA AGGGAAGGGGA-GTAGG AATTAAAGCCCCTCT Ava_3414 4243192 - 4242791 - | hypothetical protein TERM 3814 4243299 - 4243316 + r 89 -11.3 -3.9461 | opp_overlap 4243301 TAAACCATTTGTAGA GACGCGA TGAA TCGCGTC TTCTTCTTCACCCAA Ava_3415 4244220 - 4243366 - | hypothetical protein TERM 3815 4246281 - 4246268 - g 74 -6.7 -4.3129 | opp_overlap 4246268 GATTTAGTAGGAAAA GTTCC CCCC GGAAC TAGTTGGCAAGCAAC Ava_3416 4245236 - 4246804 + | transposase IS4 TERM 3816 4246967 - 4246987 + F 86 -9.7 -4.14945 | opp_overlap 4246968, overlap 4246968 GTTTGATCCCCCTAA ATCCCCCTT CAA AAGGGGGAC TTTGATTCTTGTTCC TERM 3817 4246968 - 4246986 + F 93 -13.2 -3.07882 | opp_overlap 4246968, overlap 4246967 TTTGATCCCCCTAAA TCCCCCTT CAA AAGGGGGA CTTTGATTCTTGTTC TERM 3818 4246986 - 4246968 - f 100 -13.2 -3.54424 | opp_overlap 4246968 4246967 TTTGATCCCCCTAAA TCCCCCTT CAA AAGGGGGA CTTTGATTCTTGTTC TERM 3819 4247200 - 4247246 + F 93 -11.9 -4.07687 | opp_overlap 4247208 4247215, overlap 4247203 4247208 4247215 TTTATTTACTGTGAT CTTTCAAATGAGAAAGCATTT AAACC AAATGCTTTCTCATTTCAGTG TTTTCCGCAAACAAT TERM 3820 4247203 - 4247243 + F 100 -14.4 -2.78032 | opp_overlap 4247208 4247215, overlap 4247200 4247208 4247215 ATTTACTGTGATCTT TCAAATGAGAAAGCATTT AAACC AAATGCTTTCTCATTTCA GTGTTTTCCGCAAAC TERM 3821 4247208 - 4247238 + F 100 -14.3 -3.85184 | opp_overlap 4247208 4247215, overlap 4247203 4247200 4247215 CTGTGATCTTTCAAA TGAGAAAGCATTT AAACC AAATGCTTTCTCA TTTCAGTGTTTTCCG TERM 3822 4247238 - 4247208 - f 100 -15 -3.55444 | opp_overlap 4247203 4247200 4247208 4247215, overlap 4247215 CTGTGATCTTTCAAA TGAGAAAGCATTTA AAC CAAATGCTTTCTCA TTTCAGTGTTTTCCG Ava_3417 4247527 - 4247955 + | hypothetical protein TERM 3823 4247959 - 4248010 + T 78 -9.4 -3.53811 | opp_overlap 4247963, overlap 4247962 GGGAAAATTTAGCTA GAAATTGGGGGGGGGTAGGAAGTG TTAG CACTTATTGATCCCCCCCAACTCC TTTAAAAAAGCTCAC TERM 3824 4247962 - 4248007 + T 75 -9.7 -2.90615 | opp_overlap 4247963, overlap 4247959 AAAATTTAGCTAGAA ATTGGGGGGGGGTAGGAAGTG TTAG CACTTATTGATCCCCCCCAAC TCCTTTAAAAAAGCT Ava_3418 4249203 - 4248022 - | hypothetical protein TERM 3825 4249476 - 4249435 - H 87 -11.6 -3.53444 | overlap 4249436 4249440 CGACTTTCTCTCAAA CCTAACCCCCAACCCCTT CCCTGC AAGGGAATGGGGGTAAGA TTCAAAGTAGAGACA TERM 3826 4249475 - 4249436 - H 85 -12.9 -2.71924 | overlap 4249435 4249440 GACTTTCTCTCAAAC CTAACCCCCAACCCCTT CCCTGC AAGGGAATGGGGGTAAG ATTCAAAGTAGAGAC TERM 3827 4249471 - 4249440 - H 87 -12.3 -3.27525 | overlap 4249436 4249435 TTCTCTCAAACCTAA CCCCCAACCCCTT CCCTGC AAGGGAATGGGGG TAAGATTCAAAGTAG TERM 3828 4249510 - 4249483 - H 84 -10 -3.76373 | opp_overlap 4249482 GGGGTAAGATTCAAA GTAGAGACATTG TATG CAACATCTCTAC AGTTTCAGGGGAGAG TERM 3829 4249778 - 4249763 - g 73 -5.4 -4.60041 | ATCGATTGGGAAAAA GAAAGC GATC GCTTCC GCAGAACAGATGTGA Ava_3419 4249652 - 4250551 + | UbiE/COQ5 methyltransferase Ava_3420 4250548 - 4251276 + | HAD family hydrolase Ava_3421 4251795 - 4252619 + | condensin subunit ScpA Ava_3422 4253007 - 4254176 + | nucleotidyl transferase TERM 3830 4254234 - 4254181 - T 79 -11.2 -3.10112 | overlap 4254183 ACGCAATTTAGTCAA TAGTCATTAGTCAGTTGTCAGTTG CAATTT CTACTGACAACTGACAACTAACCA CTGACCACTAACTAT TERM 3831 4254239 - 4254183 - T 100 -17 -3.1085 | gap 1, overlap 4254181 GCAATTTAGTCAATA GTCATTAGTCAGTTGTCAGTTG-CAAT TTCT ACTGACAACTGACAACTAACCACTGAC CACTAACTATTTAAG Ava_3423 4256257 - 4254242 - | arginine decarboxylase TERM 3832 4256883 - 4256867 - g 70 -5.1 -4.53475 | ACCGCACAAAAAGAA GTAAGCC TAT GGTTTAC AGATGCAGAATTAGT Ava_3424 4256489 - 4256938 + | nucleoside diphosphate kinase TERM 3833 4256982 - 4256992 + T 73 -5.4 -4.55128 | ACTGAATGAAATATT CTAG TCA CTAG TTTTCATTTCCCAGT Ava_3425 4257755 - 4257033 - | hypothetical protein TERM 3834 4257628 - 4257650 + g 74 -10.6 -2.73443 | overlap 4257627 TCTTCTAACCCTTGG GCGATCGC AGCGAGG GCGATCGC GTTATCTGCTGATAG Ava_3426 4259092 - 4258157 - | hypothetical protein Ava_3427 4259330 - 4260427 + | pentapeptide repeat-containing protein TERM 3835 4260483 - 4260451 - T 89 -7.7 -5.0133 | TAGTCTCTGAAAAAA CTTGCCTCAGAAGCA TCA CACCCCCAAGGCAAG TAAACCTAGAAATTA Ava_3428 4261913 - 4260510 - | NAD(P) transhydrogenase, beta subunit TERM 3836 4260687 - 4260677 - G 71 -6.8 -4.15106 | opp_overlap 4260677 TATCAACTTCCAAAA TGGG CAT CCCA TAAATTGGGCTAGCG Ava_3429 4262203 - 4261910 - | nicotinamide nucleotide transhydrogenase, subunit alpha Ava_3430 4263442 - 4262285 - | alanine dehydrogenase/PNT-like protein Ava_3431 4264174 - 4264686 + | hypothetical protein TERM 3837 4264729 - 4264717 - f 74 -7.7 -3.93583 | overlap 4264700 TAATTTAGGGAGAAA TGCTG ACT CAGCA CCTACTACTCCCTAA TERM 3838 4264885 - 4264872 - g 71 -2.4 -5.09762 | overlap 4264876 ACCGTAAGAGAAAAA GAAC TTCTGG GTTC CGTGCCAGAATGCGG rpmH 4264832 - 4264966 + | 50S ribosomal protein L34 TERM 3839 4265279 - 4265244 - g 82 -7.6 -4.42788 | gap 1, opp_overlap 4265254 4265255 CGTAACCGCATAAAA CGGCAAATTACGGCTGC CAT GCAGCAATTATT-GCCG AGATTAGCACCAGGG rnpA 4264992 - 4265414 + | ribonuclease P Ava_3434 4265401 - 4265784 + | hypothetical protein Ava_3435 4265991 - 4267133 + | putative inner membrane protein translocase component YidC Ava_3436 4267137 - 4267655 + | single-stranded nucleic acid binding R3H TERM 3840 4267785 - 4267756 - f 76 -5.1 -5.01042 | opp_overlap 4267763, overlap 4267760 AAGCTAAACTAAAAA TGGATTATCAGCA GAAT TGCTGATAATTGA CATAAATTCTTGTAA TERM 3841 4267781 - 4267760 - f 77 -10.3 -2.90395 | opp_overlap 4267763, overlap 4267756 TAAACTAAAAATGGA TTATCAGCA GAAT TGCTGATAA TTGACATAAATTCTT Ava_3437 4267819 - 4268328 + | hypothetical protein TERM 3842 4268480 - 4268446 - T 79 -7.2 -4.41348 | overlap 4268449 GCTGCGCCAAATAAA TGATGTAGAGAAGTTG ATG CAACGTCTCTACAGTA CAGAATAAAGTGCAT TERM 3843 4268477 - 4268449 - T 95 -13.3 -3.18452 | overlap 4268446 GCGCCAAATAAATGA TGTAGAGAAGTTG ATG CAACGTCTCTACA GTACAGAATAAAGTG Ava_3438 4270050 - 4268575 - | peptidase M50 TERM 3844 4268759 - 4268749 - G 71 -4 -4.8048 | TGCCCATACGAAAAA TTCA GAT TGAA CTAAAGACAGTAACA Ava_3439 4270421 - 4271107 + | Beta-lactamase-like Ava_3440 4272403 - 4271150 - | C-terminal processing peptidase-2 TERM 3845 4272729 - 4272709 - H 70 -2.6 -5.07652 | CCTCTTAAAAGAAAA TCCCAA AATTGCCAA TTGGGA GATTGAATCAACCGC Ava_3441 4272772 - 4273419 + | cytochrome b6 Ava_3442 4273590 - 4274072 + | cytochrome b6-f complex subunit IV Ava_3443 4274396 - 4274839 + | putative anti-sigma regulatory factor (Ser/Thr protein kinase) Ava_3444 4275283 - 4276287 + | Short-chain dehydrogenase/reductase SDR TERM 3846 4276664 - 4276677 + G 74 -6.7 -4.39828 | opp_overlap 4276664 4276666 TTTTATTGCAGAGAA GACCA CAGA TGGTC TTTTGTGGACATATT TERM 3847 4277236 - 4277249 + G 74 -6.7 -4.2573 | overlap 4277239 GATGCCTATATTATG CCTTC ACAA GAAGG TTTTGGGATTGTTTA TERM 3848 4277473 - 4277491 + G 78 -6 -4.82128 | opp_overlap 4277475, overlap 4277475 4277480 4277482 GCACTTTTCGGAATG GATGCTTT ACA AAAGCAGC TTTTGTCTTTAGTCC Ava_3445 4276351 - 4277520 + | glycosyl transferase, group 1 TERM 3849 4277560 - 4277536 - f 71 -7.1 -3.85704 | opp_overlap 4277535 4277532 TGACTAATGACCAAA CTCGCTATCCT AGA AGGAGAGCCAG ATAGTATTTAAAATG Ava_3446 4277573 - 4277944 + | hypothetical protein rpmI 4278028 - 4278225 + | 50S ribosomal protein L35 TERM 3850 4278428 - 4278413 - g 86 -3.2 -5.61881 | gap 1, overlap 4278414 4278415 TCGCAAAAAGAAAAA GC-GCGA CTT CCGCCGC CTGTGGATTACCCGC TERM 3851 4278519 - 4278507 - g 78 -4.1 -5.09426 | GGTAACTTGAAAAAA GCTGA CAT TCAAC TTAATCGGAAAATGT rplT 4278252 - 4278608 + | 50S ribosomal protein L20 Ava_3449 4278621 - 4279436 + | extracellular solute-binding protein Ava_3450 4279566 - 4280090 + | TPR repeat-containing protein TERM 3852 4280118 - 4280156 + F 100 -15.4 -3.20637 | overlap 4280112 4280113 4280120 4280122 CTAGATCCCCTAGAT TCTAGATCCCCGACTTCT CAA AGAAGTCGGGGATCTGTC TTAACTATTCGGTTT TERM 3853 4280120 - 4280154 + F 100 -22.4 -3.1577 | overlap 4280118 4280112 4280113 4280122 AGATCCCCTAGATTC TAGATCCCCGACTTCT CAA AGAAGTCGGGGATCTG TCTTAACTATTCGGT TERM 3854 4280122 - 4280152 + F 100 -22.8 -3.136 | overlap 4280120 4280118 4280112 4280113 ATCCCCTAGATTCTA GATCCCCGACTTCT CAA AGAAGTCGGGGATC TGTCTTAACTATTCG TERM 3855 4281007 - 4280995 - g 74 -6.3 -4.42639 | ATACTGCAACCAAAA GGAAA GAG TTTCC AAATACAGGGTAATG tynA 4280227 - 4282209 + | tyramine oxidase Ava_3452 4283797 - 4282325 - | periplasmic sensor Signal transduction histidine kinase Ava_3453 4284468 - 4283794 - | two component transcriptional regulator Ava_3454 4284615 - 4285193 + | proline/alanine-rich repeat-containing protein Ava_3455 4285969 - 4285229 - | undecaprenyl pyrophosphate synthetase TERM 3856 4285851 - 4285823 - G 74 -10.3 -2.63631 | CCAATCTTTACAGCA GCGCAAGAGTTCT TTG AGAGTTCTTGCGC CTTGGCGATGTCCGG TERM 3857 4286051 - 4286023 - R 83 -8.7 -4.18494 | opp_overlap 4286023 4286023, overlap 4286024 GAGGCGCAGCGAAAA GTCGGAGCGCCGG CTT CCGGCGATCTGAA CTTTTCAAGACAGAG TERM 3858 4286023 - 4286052 + r 89 -10.7 -4.07568 | gap 1, opp_overlap 4286023 4286024, overlap 4286023 GAGGCGCAGCGAAAA G-TCGGAGCGCCGG CTT CCGGCGATCTGAAC TTTTCAAGACAGAGA TERM 3859 4286023 - 4286051 + r 79 -10.9 -3.04398 | opp_overlap 4286023 4286024, overlap 4286023 GAGGCGCAGCGAAAA GTCGGAGCGCCGG CTT CCGGCGATCTGAA CTTTTCAAGACAGAG TERM 3860 4286050 - 4286024 - R 85 -12.2 -3.10775 | opp_overlap 4286023 4286023, overlap 4286023 AGGCGCAGCGAAAAG TCGGAGCGCCGG CTT CCGGCGATCTGA ACTTTTCAAGACAGA Ava_3456 4287019 - 4286090 - | hypothetical protein Ava_3457 4287466 - 4287879 + | hypothetical protein TERM 3861 4288153 - 4288139 - f 73 -5.7 -4.61147 | overlap 4288152 GAACACGATATAAAA GGTAG ATAAG CTACC TGAGCGAGCAATCAG Ava_3458 4288316 - 4289140 + | Alpha/beta hydrolase fold Ava_3459 4289256 - 4290005 + | Short-chain dehydrogenase/reductase SDR Ava_3460 4290114 - 4291490 + | FAD-dependent pyridine nucleotide-disulphide oxidoreductase Ava_3461 4292375 - 4292046 - | hypothetical protein TERM 3862 4292564 - 4292520 - H 89 -12.2 -3.29461 | opp_overlap 4292525 4292527 CAAGGGTTTGGACAA GGGTGTAGGGGTGTAAGGGT TTTAT ACCCCTATATCCTTACACCC AGTCTCAACAGACAA TERM 3863 4292525 - 4292551 + H 79 -11 -2.90075 | opp_overlap 4292520, overlap 4292527 GTTTGGACAAGGGTG TAGGGGTGTAAG GGT TTTATACCCCTA TATCCTTACACCCAG TERM 3864 4292527 - 4292549 + H 74 -9.2 -3.00298 | opp_overlap 4292520, overlap 4292525 TTGGACAAGGGTGTA GGGGTGTAAG GGT TTTATACCCC TATATCCTTACACCC TERM 3865 4294910 - 4294893 - g 73 -2.7 -5.18357 | TAACTTATCAAAAAA TGGCA AAATCCGA TGCCA GCCAAAAGTATTTTG Ava_3462 4292627 - 4295002 + | TPR repeat-containing protein Ava_3463 4295240 - 4295034 - | hypothetical protein Ava_3464 4295622 - 4295245 - | excinuclease ABC subunit C Ava_3465 4295831 - 4295640 - | hypothetical protein Ava_3466 4295958 - 4297484 + | light-independent protochlorophyllide reductase subunit B TERM 3866 4297810 - 4297787 - g 74 -9.6 -3.39895 | opp_overlap 4297774 4297789 TTGCTGATGAAGTAA CAGCTTTACG ACAA CGTATAGCTG AATTAGAACAACTAG Ava_3467 4297741 - 4300338 + | PAS/PAC sensor hybrid histidine kinase Ava_3468 4300375 - 4302519 + | anthranilate synthase, component II Ava_3469 4302589 - 4303578 + | DNA polymerase III subunit delta Ava_3470 4303679 - 4304152 + | hypothetical protein TERM 3867 4304542 - 4304490 - T 88 -8.3 -4.64766 | gap 1, opp_overlap 4304490 4304491 4304533, overlap 4304491 TTGACACTGCAAAAA CCTTAATTCATAAGTAAAA-AATT GGATAA AATAATTTTACTTATGAATTAAGA TTTTCATTGATTCAT TERM 3868 4304490 - 4304542 + T 73 -6.1 -4.50193 | gap 1, opp_overlap 4304490 4304491, overlap 4304491 4304533 TTGACACTGCAAAAA CCTTAATTCATAAGTAAAA-AATT GGATAA AATAATTTTACTTATGAATTAAGA TTTTCATTGATTCAT TERM 3869 4304491 - 4304541 + T 75 -9.6 -3.29031 | gap 1, opp_overlap 4304491 4304490, overlap 4304490 4304533 TGACACTGCAAAAAC CTTAATTCATAAGTAAAA-AATT GGATAA AATAATTTTACTTATGAATTAAG ATTTTCATTGATTCA TERM 3870 4304541 - 4304491 - T 76 -9.6 -3.38378 | gap 1, opp_overlap 4304490 4304491 4304533, overlap 4304490 TGACACTGCAAAAAC CTTAATTCATAAGTAAAA-AATT GGATAA AATAATTTTACTTATGAATTAAG ATTTTCATTGATTCA Ava_3471 4305141 - 4304554 - | LuxR family transcriptional regulator ubiA 4305709 - 4306665 + | tocopherol phytyltransferase Ava_3473 4306670 - 4307137 + | TPR repeat-containing protein TERM 3871 4308527 - 4308549 + G 75 -5.7 -4.67011 | gap 1 TAGATATCATCACCT TTGC-CAGTT CTAA AACTGTGCAA TTTTTCCATCAACTT Ava_3474 4307191 - 4308744 + | uroporphyrinogen-III synthase / uroporphyrinogen-III C-methyltransferase Ava_3475 4308886 - 4309551 + | hypothetical protein Ava_3476 4309660 - 4310985 + | hypothetical protein minC 4311273 - 4312166 + | septum formation inhibitor Ava_3478 4312212 - 4313018 + | septum site-determining protein MinD Ava_3479 4313052 - 4313345 + | cell division topological specificity factor MinE TERM 3872 4313458 - 4313432 - T 72 -8 -3.7104 | opp_overlap 4313432 ATTTATACCCAACAA TGGTTTTAGGTG ATT CCCCGAAAACCA TAATATATACCTAAA TERM 3873 4313553 - 4313523 - T 100 -8.4 -5.40072 | opp_overlap 4313523 CCCTTGGCAAAAAAA TTCCCGTCATCA ACAGTAG TGACAACGGGAA TTCGTTATATTTGCT Ava_3480 4314848 - 4313574 - | hypothetical protein TERM 3874 4315091 - 4315069 - H 81 -4.1 -5.45652 | opp_overlap 4315071, overlap 4315071 ATTGCCAACAAAAAA CATCAGCAG ATTTA CTGCCGATT TATGACTTAGAATAG TERM 3875 4315089 - 4315071 - H 76 -6.7 -4.36592 | opp_overlap 4315071, overlap 4315069 TGCCAACAAAAAACA TCAGCAG ATTTA CTGCCGA TTTATGACTTAGAAT fmt 4315748 - 4316752 + | methionyl-tRNA formyltransferase Ava_3482 4317103 - 4316735 - | hypothetical protein TERM 3876 4317657 - 4317669 + G 72 -7.7 -3.77722 | opp_overlap 4317657 TGACCAACCCCAAGA CCCAT TTT ATGGG TTGTTGATGCTTAGG Ava_3483 4317292 - 4320456 + | TPR repeat-containing protein TERM 3877 4320516 - 4320494 - f 100 -19.2 -3.53761 | overlap 4320482 GAACCCCTCTCCAAA CCTCTCCCCG ACG CGGGGAGAGG CTTAAAACCCTGATT TERM 3878 4320553 - 4320587 + F 100 -15.8 -3.19192 | opp_overlap 4320552 TACTCAGTTATAGAT TTTCAGCCCCTTCCCT TGT AGGGAAGGGGTTGGGG TTAGGTTCCGTCGAA TERM 3879 4321227 - 4321216 - f 71 -4.4 -4.74767 | ACAATGAACAGAAAA CAGT TATC ACTG AATATTTAAAAATTC Ava_3484 4321578 - 4321823 + | photosystem I subunit VII TERM 3880 4321996 - 4321982 - f 80 -10 -3.55761 | opp_overlap 4321982 TACCTAGTGGTTAAA GGAGCA ATC TGCTCC TTTTTTCTTGGGTGT TERM 3881 4321982 - 4321996 + F 100 -10 -5.49234 | opp_overlap 4321982 TACCTAGTGGTTAAA GGAGCA ATC TGCTCC TTTTTTCTTGGGTGT Ava_3485 4322126 - 4324027 + | D-fructose-6-phosphate amidotransferase Ava_3486 4324161 - 4324979 + | Tn7-like transposition protein A TERM 3882 4326545 - 4326563 + G 75 -5.3 -4.84761 | overlap 4326556 GGGGTATCGCCAATC GTTCTGG CAGAC TCAGAAC TTTTTCTGAAGATAT Ava_3487 4325002 - 4327230 + | HMG-I and HMG-Y, DNA-binding Ava_3488 4327217 - 4328887 + | Tn7-like transposition protein C Ava_3489 4328895 - 4329845 + | Tn7-like transposition protein D Ava_3490 4330014 - 4330697 + | hypothetical protein Ava_3491 4330715 - 4332253 + | hypothetical protein TERM 3883 4332705 - 4332684 - g 82 -4.5 -5.32882 | GATGAGGACAAAAAA CTTTCTC AAGGTAAG GAGAAAG AAACTGCAAAACGTA Ava_3492 4332312 - 4333286 + | CRISPR-associated negative autoregulator TERM 3884 4333564 - 4333552 - g 91 -7.7 -4.76802 | opp_overlap 4333551 TCTAAAAATAATAAA CCTGA TTA TCAGG AGTTATTAACTAATA Ava_3493 4333288 - 4333920 + | fruiting body developmental protein S-like protein Ava_3494 4334604 - 4334446 - | hypothetical protein TERM 3885 4336854 - 4336868 + G 77 -8.6 -3.94188 | opp_overlap 4336853 ACATCTCGACCAGAT GCCTTT AAC AAAGGC TTATTTGGAATCAGT Ava_3495 4335160 - 4337070 + | Tn7-like transposition protein D TERM 3886 4337085 - 4337062 - T 95 -11.1 -4.43624 | AAAGCATACAAGAAA GAGAGGTGA TTCAAT TCACCTCTC CAAGTGATGGGATAA Ava_3496 4337415 - 4337113 - | hypothetical protein TERM 3887 4337448 - 4337483 + r 100 -9.7 -4.99134 | opp_overlap 4337448 TGGGGTTTAACAAAA GGCGATCGCATTTCT CTTCCC GGAGGGGCGATCGCC TTTTTGATTTCAGAT Ava_3497 4337841 - 4337548 - | hypothetical protein Ava_3498 4338039 - 4340123 + | N-6 DNA methylase Ava_3499 4340130 - 4341347 + | restriction modification system DNA specificity subunit Ava_3500 4341373 - 4341618 + | hypothetical protein Ava_3501 4341615 - 4342112 + | hypothetical protein TERM 3888 4342872 - 4342894 + G 73 -2.6 -5.12617 | opp_overlap 4342868 AAACCAAAATTGGCA GTTTTACCGC AGA GTGGGAACAC TTTTTTAACTGGTTA TERM 3889 4344935 - 4344919 - g 70 -7.3 -3.75718 | overlap 4344915 TTTAAGCAAAATTAA CTTCGAG CAA CTCAAAG CCGAATTTAGCTACA Ava_3502 4342244 - 4345483 + | Type I site-specific deoxyribonuclease HsdR TERM 3890 4346046 - 4346022 - g 73 -7.1 -4.14013 | opp_overlap 4346022 4346021 4346023, overlap 4346023 GAAAACTCTTTAAAA GCTTCTCTCGC AAC GAGAGAGAAGA GTTTTTGGCTGCGGC TERM 3891 4346023 - 4346045 + G 74 -10.6 -2.63208 | opp_overlap 4346022 4346023, overlap 4346022 4346021 AAAACTCTTTAAAAG CTTCTCTCGC AAC GAGAGAGAAG AGTTTTTGGCTGCGG TERM 3892 4346045 - 4346023 - g 77 -10.6 -3.07685 | opp_overlap 4346023 4346022 4346021, overlap 4346022 AAAACTCTTTAAAAG CTTCTCTCGC AAC GAGAGAGAAG AGTTTTTGGCTGCGG Ava_3503 4345985 - 4347031 + | AAA ATPase, central region TERM 3893 4348248 - 4348232 - g 79 -6.7 -4.71222 | opp_overlap 4348232 ATACCAAAACCAAAA CAAAAAT ATT ATTTTTG TGATTTCAGCAGGAA Ava_3504 4347015 - 4349498 + | peptidase S8 and S53, subtilisin, kexin, sedolisin Ava_3505 4351513 - 4350164 - | hypothetical protein Ava_3506 4352003 - 4351581 - | hypothetical protein Ava_3507 4355023 - 4352000 - | protein prenyltransferase, alpha subunit TERM 3894 4352571 - 4352584 + g 71 -3.1 -5.00642 | overlap 4352558 4352557 TAGCTTTGGGGCAAA GCATT TATC AGTGC TTTTTGTGTGGCTTG TERM 3895 4353353 - 4353365 + g 74 -7.7 -4.04997 | TAGTTGTTTTTTACT TCGCT CAG AGCGA TTTGGTTCATTTAAT TERM 3896 4354573 - 4354598 + g 70 -7.8 -3.69883 | CTGCTTCGTCACTCG TCAATTCAAT AGCATC ATTGAATTGA TTACTTGTTTCTTCT TERM 3897 4355425 - 4355462 + r 100 -9.5 -5.81032 | gap 1, opp_overlap 4355427, overlap 4355427 TAGAGTAGATAAGAT AATTTCTAGATGTGACTA CTA TA-TCACATCTAGAAATA TTTTTTTTGGCATTG TERM 3898 4355427 - 4355460 + r 100 -12.1 -4.53853 | gap 1, opp_overlap 4355427, overlap 4355425 GAGTAGATAAGATAA TTTCTAGATGTGACTA CTA TA-TCACATCTAGAAA TATTTTTTTTGGCAT TERM 3899 4355460 - 4355427 - R 93 -12.1 -3.80945 | gap 1, opp_overlap 4355425 4355427 GAGTAGATAAGATAA TTTCTAGATGTGACTA CTA TA-TCACATCTAGAAA TATTTTTTTTGGCAT Ava_3508 4358977 - 4355531 - | signal transduction protein TERM 3900 4357687 - 4357697 + g 84 -5.4 -5.34309 | TACGCGCTAGTAATT TGAG ACG CTCA TTTTTATTTAATGCT Ava_3509 4359379 - 4359954 + | hypothetical protein Ava_3510 4361283 - 4360024 - | hypothetical protein Ava_3511 4362365 - 4361319 - | hypothetical protein Ava_3512 4363401 - 4362349 - | mandelate racemase/muconate lactonizing protein TERM 3901 4363083 - 4363064 - G 70 -7.2 -3.87373 | CAGATTTGCCACAAA GGTAAACC CACA GATTTACC CAGCCAGTCGTGCAT Ava_3513 4363675 - 4364229 + | NUDIX hydrolase TERM 3902 4364350 - 4364296 - f 100 -23.8 -3.95836 | opp_overlap 4364295, overlap 4364322 ATTTTTAAAATATAA GTAGGGTGGGCAATTCCCACCACA AACATGA TAAGGTGGGCATTGCCCACCCTAC AGATAATTAGAGAAA TERM 3903 4364352 - 4364322 - f 74 -7.7 -3.96892 | gap 2, opp_overlap 4364295, overlap 4364296 AATTCCCACCACAAA CATGATAAGGTGGGC ATT GCCCACCCTA-CA-G ATAATTAGAGAAATT Ava_3514 4364396 - 4364866 + | acetyltransferase Ava_3515 4366530 - 4364875 - | bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II protein TERM 3904 4365441 - 4365459 + g 75 -10.2 -2.84693 | overlap 4365440 AGCCGTATCCCTTAA CCCCGGCA ATT TTCCGGGG ATTGTTGGTAATCAG TERM 3905 4366795 - 4366839 + H 71 -8.7 -3.16881 | overlap 4366799 CTTGTATATCTTTTC GTGTTGGCTGTTCACAGTTGA CGG TTAACTGTGAACAAACCATAC TTACTAGAGTCCCTG TERM 3906 4366799 - 4366836 + H 75 -10.1 -2.78547 | gap 1, overlap 4366795 TATATCTTTTCGTGT TGG-CTGTTCACAGTTGA CGG TTAACTGTGAACAAACCA TACTTACTAGAGTCC argC 4367045 - 4368103 + | N-acetyl-gamma-glutamyl-phosphate reductase eno 4369479 - 4368190 - | phosphopyruvate hydratase TERM 3907 4369285 - 4369295 + g 100 -8.2 -4.84918 | overlap 4369277 GAGTACCCCTTTACC GCCG TAA CGGC TTTTATCTTTGTCCC Ava_3518 4369744 - 4370586 + | hypothetical protein Ava_3519 4371514 - 4370687 - | phosphomethylpyrimidine kinase Ava_3520 4373158 - 4371524 - | hypothetical protein Ava_3521 4373762 - 4373331 - | hypothetical protein Ava_3522 4373889 - 4375736 + | peptidase S8 and S53, subtilisin, kexin, sedolisin TERM 3908 4375848 - 4375896 + G 89 -11.8 -3.3482 | gap 1, opp_overlap 4375848 ACAGGCAAAATCGAA CGCCGTAATCTTGGCACTGGCGC ATGG GCGTTAGTCTCA-GATGACGGCG TTACTTACGAAATTC Ava_3523 4375818 - 4376054 + | hypothetical protein Ava_3524 4376435 - 4376118 - | hypothetical protein TERM 3909 4377155 - 4377129 - H 100 -8.8 -5.45652 | gap 1, opp_overlap 4377128 4377127 ATTTCCAATAAAAAA CCCCTAG-TGG TGGCAG CCAGCTAGGGG AGTTAGTTATCAGGG TERM 3910 4377272 - 4377258 - H 80 -2.1 -5.60993 | gap 1, opp_overlap 4377259, overlap 4377236 4377237 4377259 4377268 TTTTTCACAAAAAAA GCC-CT TACA AGTGGC AGCCACTGGGGAGAG TERM 3911 4377425 - 4377396 - H 84 -3.4 -5.76633 | overlap 4377397 CTACACATAAAAAAA GCCCCCAGTCGG TGTTAG CCAGCTAGGGGA GTTAGTTATCAGGGT TERM 3912 4377424 - 4377397 - H 73 -6.9 -4.04353 | overlap 4377396 TACACATAAAAAAAG CCCCCAGTCGG TGTTAG CCAGCTAGGGG AGTTAGTTATCAGGG TERM 3913 4377558 - 4377529 - H 88 -3.4 -5.82172 | overlap 4377530 ATGAACATAAAAAAA GCCCCCAGTCGG TGTTAG CCAGCTAGGGGA GTTAGTTATCAGGGT TERM 3914 4377557 - 4377530 - H 73 -6.9 -4.06863 | overlap 4377529 TGAACATAAAAAAAG CCCCCAGTCGG TGTTAG CCAGCTAGGGG AGTTAGTTATCAGGG TERM 3915 4377691 - 4377662 - H 88 -3.4 -5.82172 | overlap 4377663 ATGAACATAAAAAAA GCCCCCAGTCGG TGTTAG CCAGCTAGGGGA GTTAGTTATCAGGGT TERM 3916 4377690 - 4377663 - H 73 -6.9 -4.06863 | overlap 4377662 TGAACATAAAAAAAG CCCCCAGTCGG TGTTAG CCAGCTAGGGG AGTTAGTTATCAGGG TERM 3917 4377824 - 4377795 - H 88 -3.4 -5.82172 | overlap 4377796 ATGAACATAAAAAAA GCCCCCAGTCGG TGTTAG CCAGCTAGGGGA GTTAGTTATCAGGGT TERM 3918 4377823 - 4377796 - H 73 -6.9 -4.06863 | overlap 4377795 TGAACATAAAAAAAG CCCCCAGTCGG TGTTAG CCAGCTAGGGG AGTTAGTTATCAGGG TERM 3919 4377957 - 4377928 - H 88 -3.4 -5.82172 | overlap 4377929 ATGAACATAAAAAAA GCCCCCAGTCGG TGTTAG CCAGCTAGGGGA GTTAGTTATCAGGGT TERM 3920 4377956 - 4377929 - H 73 -6.9 -4.06863 | overlap 4377928 TGAACATAAAAAAAG CCCCCAGTCGG TGTTAG CCAGCTAGGGG AGTTAGTTATCAGGG TERM 3921 4378090 - 4378061 - H 88 -3.4 -5.82172 | overlap 4378062 ATGAACATAAAAAAA GCCCCCAGTCGG TGTTAG CCAGCTAGGGGA GTTAGTTATCAGGGT TERM 3922 4378089 - 4378062 - H 73 -6.9 -4.06863 | overlap 4378061 TGAACATAAAAAAAG CCCCCAGTCGG TGTTAG CCAGCTAGGGG AGTTAGTTATCAGGG TERM 3923 4378223 - 4378194 - H 88 -3.4 -5.82172 | overlap 4378195 ATGAACATAAAAAAA GCCCCCAGTCGG TGTTAG CCAGCTAGGGGA GTTAGTTATCAGGGT TERM 3924 4378222 - 4378195 - H 73 -6.9 -4.06863 | overlap 4378194 TGAACATAAAAAAAG CCCCCAGTCGG TGTTAG CCAGCTAGGGG AGTTAGTTATCAGGG TERM 3925 4378510 - 4378483 - H 100 -9.2 -5.38047 | gap 1 TAGTTATAGAAAAAA CCCCCAGT-GGCT ATC AACCAACTAGGGG AGTTAAAGATCAAGG TERM 3926 4380126 - 4380139 + G 91 -8.1 -4.89521 | opp_overlap 4380125 GATGACCCAAGTTAT GCCGA AGAT TCGGC TTTTGTTTCCGATAT TERM 3927 4380210 - 4380196 - g 72 -6.4 -4.25056 | TAGGGGATGAAGAAA CTGAAG TAC CTCCAG AAGTTAGACAACCTT Ava_3525 4378716 - 4381223 + | heterocyst differentiation protein TERM 3928 4381286 - 4381263 - f 88 -3.2 -5.8187 | gap 1, opp_overlap 4381272 4381272, overlap 4381271 4381272 GACCGAACAAAAAAA GGATACAAGCC CCC GGATT-TATCC GTGAGGTCTTTAATT Ava_3526 4381571 - 4382947 + | histidine kinase Ava_3527 4383032 - 4383487 + | hypothetical protein Ava_3528 4384816 - 4383647 - | peptidoglycan binding domain-containing protein Ava_3529 4386304 - 4385234 - | hypothetical protein Ava_3530 4388161 - 4386509 - | Ppx/GppA phosphatase TERM 3929 4386866 - 4386886 + g 72 -9.7 -2.7898 | overlap 4386862 GGCAATGATTTCGAT CTCGGTTTC GTT GTAACCGAG TAGTTCACTATTGCG TERM 3930 4387985 - 4387995 + g 78 -5.4 -5.01422 | overlap 4387975 AATATTGCGATCGCC CAGT CGC ACTG TTTCTTTTTCTCTGG ubiA 4388541 - 4389413 + | prenyltransferase TERM 3931 4389528 - 4389546 + F 73 -10.2 -2.56164 | overlap 4389528 GCTAATTATTTCGTA GGGTGGGC AAT GCCCACCA CTTGCTGATTGAGAA TERM 3932 4389528 - 4389547 + F 77 -10 -3.27298 | gap 1, overlap 4389528 GCTAATTATTTCGTA G-GGTGGGC AAT GCCCACCAC TTGCTGATTGAGAAG TERM 3933 4389642 - 4389668 + F 80 -5.8 -4.91459 | overlap 4389645 ATAAATTCACACTCA GAGGGACAAAGC AAT GCTGTGTCCTTA TTTTTCTACGTATTC TERM 3934 4389645 - 4389665 + F 91 -9.7 -4.5448 | overlap 4389642 AATTCACACTCAGAG GGACAAAGC AAT GCTGTGTCC TTATTTTTCTACGTA Ava_3532 4389839 - 4390441 + | hypothetical protein TERM 3935 4390923 - 4390887 - T 74 -2.9 -5.33785 | overlap 4390888 4390891 AATCATGATAAAAAA CTAATTTTATGGTGGGC ATT GCCCACCCTACGACTAC GAGGATAAAAAATAA TERM 3936 4391190 - 4391132 - T 74 -9.2 -2.97212 | gap 1 AAGCCAAGAAAATAG TGTTTGTAGTCAGCACTTCAGTGCTGA GAGAAA TTAGAAATAAAGTGCTGACTACAAAC- TAAAACATTTCTAGA Ava_3533 4392855 - 4391212 - | acetolactate synthase Ava_3534 4394308 - 4392941 - | aldehyde dehydrogenase TERM 3937 4393549 - 4393590 + g 100 -16.7 -3.86346 | opp_overlap 4393544 4393546 CGTTATTTAACATCC GTGCTGATGTAGCTGTAGC GGCG GCTGCTTCTACATCAGCAC TTTCTAACACAATAA Ava_3535 4399849 - 4394435 - | Serine/threonine protein kinase and Signal transduction histidine kinase (STHK) with GAF sensor TERM 3938 4396645 - 4396661 + g 74 -9.5 -3.25823 | CTGTTGTTATTTGAT TGAGTTG CTC CAACTCA TTGCTGTAGGCGCGA Ava_3536 4402796 - 4400271 - | cyclic nucleotide-binding domain-containing protein TERM 3939 4400674 - 4400658 - G 71 -9.5 -3.01217 | opp_overlap 4400656 TAAAATAATAGCAGA TGGCATT AAT AATGCCA AAATTGATATTCCCA TERM 3940 4401675 - 4401687 + g 75 -3.4 -5.12617 | TGCTTGGACAATTGC CCTT TCTAC AAGG TTTTTTAGCTCCTTG Ava_3537 4403098 - 4403655 + | hypothetical protein Ava_3538 4404622 - 4403780 - | hypothetical protein TERM 3941 4404731 - 4404783 + H 100 -22.9 -3.02096 | opp_overlap 4404727, overlap 4404727 4404733 4404745 AGTCAATAGTATCTG TAGGGTGGGCATTGCCCACCATATC TGG GTTTTGCTGGGCAATGCTCACCCTA TATATAATTCATAAA TERM 3942 4404733 - 4404781 + H 100 -21.1 -3.06361 | opp_overlap 4404727, overlap 4404727 4404731 4404745 TCAATAGTATCTGTA GGGTGGGCATTGCCCACCATATC TGG GTTTTGCTGGGCAATGCTCACCC TATATATAATTCATA Ava_3539 4404865 - 4406787 + | tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA Ava_3540 4407112 - 4408500 + | hypothetical protein Ava_3541 4410462 - 4408495 - | multi-sensor Signal transduction histidine kinase TERM 3943 4410480 - 4410499 + r 73 -7.2 -4.00532 | GAGTCTTACCAACTT CACCTATA CGAT TGTAGGTG TTTCCTCTTTGCAGA Ava_3542 4411982 - 4410588 - | PAS/PAC sensor Signal transduction histidine kinase TERM 3944 4412565 - 4412579 + G 74 -4.2 -5.00616 | CAGCCAAGCCTAGTT CTGAGT TCT ACACAG TTTTTTCAGAAGCAG Ava_3543 4412486 - 4413535 + | hypothetical protein TERM 3945 4413588 - 4413605 + T 88 -11.3 -3.67597 | opp_overlap 4413590 TTAACCATTTGTAGA GACGCGA TGAA TCGCGTC TTCTTCACTAAACCA mtnA 4414656 - 4413613 - | methylthioribose-1-phosphate isomerase Ava_3545 4416774 - 4414729 - | Sodium/hydrogen exchanger Ava_3546 4417799 - 4416900 - | hypothetical protein Ava_3547 4418194 - 4417811 - | aspartate alpha-decarboxylase TERM 3946 4417841 - 4417859 + g 86 -3 -5.58454 | CAGGTCATCGTAGCG CCGCACTT CTA AAGGTCGG TTTTTTTCATCTACA Ava_3548 4418882 - 4418373 - | inorganic pyrophosphatase TERM 3947 4419047 - 4419023 - H 88 -5 -5.52384 | CTCCTATGAAAAAAA GCGCTGTG GAAAAATAT CACAACGC TGCTAGAGTTATTAA TERM 3948 4419094 - 4419128 + H 78 -10.3 -3.06312 | opp_overlap 4419101, overlap 4419079 4419101 TGAAAAGAAGCTTTT CCTTAAATTTGAGTA ATACA TACTCAAATTTAAGC TTAGATCGCAGATTT TERM 3949 4419884 - 4419871 - H 72 -3.9 -4.91357 | AAAGATATAAGAAAA TCTAA GCAA TTAGA TGGATCATAATTTTG TERM 3950 4419947 - 4419959 + H 70 -3.4 -4.94109 | TAAATTGTGAATGTG CTGA GTGTG TCAG TTATTTTTTATTTTC Ava_3550 4420559 - 4421056 + | hypothetical protein TERM 3951 4421109 - 4421087 - T 76 -4.9 -4.91046 | opp_overlap 4421079 4421087, overlap 4421079 CATAAAATAAAGAAA GCATCTTTT TTTTC AGAAGATGC TTTTTTATTACTTTA TERM 3952 4421087 - 4421109 + T 100 -7.1 -5.59655 | opp_overlap 4421087 4421079, overlap 4421079 CATAAAATAAAGAAA GCATCTTTT TTTTC AGAAGATGC TTTTTTATTACTTTA Ava_3551 4422070 - 4421204 - | hypothetical protein TERM 3953 4421382 - 4421392 + g 86 -3.2 -5.71983 | ACTATTGTTTCTTCT GGTT CTG AGCC TTTTTTTATACTTAA TERM 3954 4421521 - 4421535 + g 73 -8.6 -3.5812 | opp_overlap 4421520, overlap 4421510 TCCATTCCAACTCAC CTTGGA ATT TCCAAG TCTTTCTAATCACTC Ava_3552 4422848 - 4422075 - | hypothetical protein TERM 3955 4422927 - 4422948 + r 100 -8.7 -5.65927 | opp_overlap 4422927 TGAACCAAACAAAAA TACCCCCCA TCTC TGGAGGGTA TTTTTTATTTAACTA TERM 3956 4422948 - 4422927 - R 100 -10.9 -5.38326 | opp_overlap 4422927 TGAACCAAACAAAAA TACCCCCCA TCTC TGGAGGGTA TTTTTTATTTAACTA Ava_3553 4424069 - 4422987 - | photosystem II reaction centre protein PsbA/D1 Ava_3554 4424434 - 4424613 + | high light inducible protein TERM 3957 4424649 - 4424705 + T 81 -9.6 -3.65046 | gap 1 TTCCAAGCTTAGTAG GGTGCGTCAGTGTGAATAATTTCTAAG TATA TTTAGGTTCTAT-CGCACTGACGCACC TTATTGGACTGAACA TERM 3958 4424833 - 4424852 + T 100 -8.6 -5.65513 | gap 1, opp_overlap 4424833 GATTGCTTAACCAGA CCGCC-CTA ATC TAGTGGCGG TTTTTTTGGTTACTG Ava_3555 4425833 - 4424862 - | hypothetical protein aspA 4427389 - 4425974 - | aspartate ammonia-lyase Ava_3557 4430199 - 4427461 - | ATPase, E1-E2 type Ava_3558 4430418 - 4431629 + | precorrin-6Y C5,15-methyltransferase (decarboxylating) TERM 3959 4431873 - 4431907 + F 100 -15.8 -3.19192 | opp_overlap 4431872 TACTCAGTTATAGAT TTTCAGCCCCTTCCCT TGT AGGGAAGGGGTTGGGG TTAGGTTCCGTCGAA Ava_3559 4432168 - 4432362 + | heavy metal transport/detoxification protein TERM 3960 4432374 - 4432414 + T 74 -7.6 -3.9392 | opp_overlap 4432376 4432401 4432402, overlap 4432376 ATAAATTTCTGGAAC CACGGGATACCTGAATGT ATAGA AAAGTCGGGTATCCCGTA TTCTTTCCACTCAAC TERM 3961 4432376 - 4432412 + T 80 -10.2 -3.55946 | opp_overlap 4432376 4432401 4432402, overlap 4432374 AAATTTCTGGAACCA CGGGATACCTGAATGT ATAGA AAAGTCGGGTATCCCG TATTCTTTCCACTCA Ava_3560 4432996 - 4432607 - | hypothetical protein argS 4433368 - 4435134 + | arginyl-tRNA synthetase Ava_3562 4435181 - 4436365 + | ATPase-like Ava_3563 4436367 - 4437086 + | hypothetical protein Ava_3564 4437104 - 4437388 + | hypothetical protein TERM 3962 4437430 - 4437400 - T 100 -21.4 -3.14683 | opp_overlap 4437400 4437402 4437404 ATAGTTTTCTATCAA GATACCCGACTTCT TTG AGAAGTCGGGTATC TGTAGTCGGGTATCT TERM 3963 4437400 - 4437430 + T 100 -21.4 -2.80622 | opp_overlap 4437400, overlap 4437402 4437404 ATAGTTTTCTATCAA GATACCCGACTTCT TTG AGAAGTCGGGTATC TGTAGTCGGGTATCT TERM 3964 4437402 - 4437428 + T 100 -18.2 -2.94925 | opp_overlap 4437400, overlap 4437400 4437404 AGTTTTCTATCAAGA TACCCGACTTCT TTG AGAAGTCGGGTA TCTGTAGTCGGGTAT TERM 3965 4437404 - 4437426 + T 100 -16.4 -3.02649 | opp_overlap 4437400, overlap 4437402 4437400 TTTTCTATCAAGATA CCCGACTTCT TTG AGAAGTCGGG TATCTGTAGTCGGGT Ava_3565 4440207 - 4437460 - | ATPase, E1-E2 type TERM 3966 4438267 - 4438281 + g 78 -7.1 -4.48987 | opp_overlap 4438256 4438253 ACCATCCCCAGTCAT GGCGA CGACT TCGCC TTTTGATTGTAAGGC TERM 3967 4440408 - 4440434 + H 100 -16.6 -3.5525 | overlap 4440433 ACCTAACCCCCCTAG CCCCCCTTCCCT ACA AGGGAATGGGGG TTTCAAAGCCTCTCT TERM 3968 4440466 - 4440442 - H 80 -9.9 -3.53343 | opp_overlap 4440433 4440443 4440443, overlap 4440443 AATGGGGGTTTCAAA GCCTCTCTCCG CTT CGGGGAGAGGT TTGGAGAGGGGTCTT TERM 3969 4440465 - 4440443 - H 88 -13.4 -2.71791 | opp_overlap 4440433 4440443 4440443, overlap 4440442 ATGGGGGTTTCAAAG CCTCTCTCCG CTT CGGGGAGAGG TTTGGAGAGGGGTCT TERM 3970 4440443 - 4440465 + H 100 -15.6 -3.53563 | opp_overlap 4440443 4440442, overlap 4440433 4440443 ATGGGGGTTTCAAAG CCTCTCTCCG CTT CGGGGAGAGG TTTGGAGAGGGGTCT Ava_3566 4440548 - 4441630 + | hypothetical protein Ava_3567 4442820 - 4441642 - | N-acylglucosamine 2-epimerase Ava_3568 4443770 - 4443135 - | hypothetical protein Ava_3569 4445146 - 4444037 - | glycosyl transferase, group 1 Ava_3570 4446060 - 4445263 - | LmbE-like protein TERM 3971 4445351 - 4445365 + g 75 -2.1 -5.31072 | gap 1, opp_overlap 4445351 ATCTGAGAAGAATAT GAG-GC GATC GCTCTC TTTTTCTTATCTTGT TERM 3972 4446092 - 4446076 - R 74 -3.8 -5.1356 | CTTTATCAATAAAAA TAAATG CTCAT CATTTA AAATATCAATAATTA TERM 3973 4446394 - 4446449 + r 100 -14 -3.14132 | gap 1, opp_overlap 4446391 4446420 4446427 AATATCTAAATATTT GTAGGG-TGGGCATTGCCCACCAAAAC TAT GATACGGTGGGCAATGCCCAACGCCAC TTACTCCAAGCCGGG TERM 3974 4446445 - 4446427 - R 75 -10.2 -2.9244 | opp_overlap 4446394, overlap 4446391 4446420 ACCAAAACTATGATA CGGTGGGC AAT GCCCAACG CCACTTACTCCAAGC TERM 3975 4446736 - 4446716 - R 86 -9.7 -4.04394 | opp_overlap 4446699 4446717, overlap 4446717 GGGAAATGAATCAAA GTCCCCCTT TTT AAGGGGGAT TTAGGGGGATCTAAA TERM 3976 4446735 - 4446717 - R 93 -13.2 -3.01914 | opp_overlap 4446699 4446717, overlap 4446716 GGAAATGAATCAAAG TCCCCCTT TTT AAGGGGGA TTTAGGGGGATCTAA TERM 3977 4446717 - 4446735 + r 100 -13.2 -3.55071 | opp_overlap 4446717 4446716, overlap 4446699 GGAAATGAATCAAAG TCCCCCTT TTT AAGGGGGA TTTAGGGGGATCTAA TERM 3978 4447035 - 4447021 - R 83 -11.4 -3.05963 | AGGCTTACGCCAACA TGGGGG AAA CCCCCA AGACCGCGCTGCCTC TERM 3979 4447045 - 4447096 + r 100 -13.2 -3.69256 | gap 1, opp_overlap 4447065, overlap 4447047 4447049 4447049 CCCCCAAGACCGCGC TGCCT-CACCAGTCGCCAGAATTCA GTA TGAATTCTGGCGACTGACGCATGTA TTCTGTTCGATAAAT TERM 3980 4447047 - 4447094 + r 100 -13.6 -3.42482 | gap 1, opp_overlap 4447065, overlap 4447045 4447049 4447049 CCCAAGACCGCGCTG CCT-CACCAGTCGCCAGAATTCA GTA TGAATTCTGGCGACTGACGCATG TATTCTGTTCGATAA TERM 3981 4447049 - 4447091 + r 100 -16.4 -2.55947 | opp_overlap 4447065, overlap 4447047 4447045 4447049 CAAGACCGCGCTGCC TCACCAGTCGCCAGAATTCA GTA TGAATTCTGGCGACTGACGC ATGTATTCTGTTCGA TERM 3982 4447049 - 4447092 + r 100 -14.8 -3.27784 | gap 1, opp_overlap 4447065, overlap 4447049 4447047 4447045 CAAGACCGCGCTGCC T-CACCAGTCGCCAGAATTCA GTA TGAATTCTGGCGACTGACGCA TGTATTCTGTTCGAT Ava_3571 4449147 - 4447156 - | hypothetical protein Ava_3572 4450065 - 4451234 + | glycosyl transferase, group 1 Ava_3573 4451259 - 4452395 + | glycosyl transferase, group 1 Ava_3574 4453791 - 4452424 - | FAD-dependent pyridine nucleotide-disulphide oxidoreductase Ava_3575 4454583 - 4453915 - | cytochrome c oxidase subunit III Ava_3576 4456445 - 4454784 - | cytochrome c oxidase, subunit I Ava_3577 4457370 - 4456435 - | cytochrome C oxidase subunit II, transmembrane region TERM 3983 4457173 - 4457163 - G 73 -5.4 -4.63218 | GTGCGCGGAAGAAAA GTAC CGA GTAC ACCATCATGCCTACA Ava_3578 4457996 - 4457391 - | hypothetical protein TERM 3984 4457765 - 4457749 - G 74 -4.3 -5.03314 | opp_overlap 4457759, overlap 4457733 4457734 4457751 GCGACTGTGAAAAAA GTCACAG CAG CTGCGCC TAGCAGGTTGTACCA TERM 3985 4457866 - 4457855 - G 71 -4.4 -4.8048 | TTTCTAGAGGAAAAA TAGC TCCT GCTA TGTCAAACAAGATGG Ava_3579 4458487 - 4457993 - | hypothetical protein TERM 3986 4458740 - 4458718 - R 72 -4 -5.0538 | opp_overlap 4458731 4458731, overlap 4458719 4458721 4458722 TTCTATTGGAAAAAA CTAGGTACCC TAC GGGTACTCTG CGAGAACGCCTTTGG TERM 3987 4458736 - 4458722 - R 74 -10 -2.62513 | opp_overlap 4458731 4458731, overlap 4458719 4458721 4458718 ATTGGAAAAAACTAG GTACCC TAC GGGTAC TCTGCGAGAACGCCT TERM 3988 4458757 - 4458747 - R 70 -8.2 -3.29511 | opp_overlap 4458731 4458731 GGTACTCTGCGAGAA CGCC TTT GGCG AACGCGGTAGCGTTC Ava_3580 4459875 - 4459066 - | M15B family D-Ala-D-Ala carboxypeptidase VanY TERM 3989 4460676 - 4460636 - g 88 -10 -4.14598 | gap 2, overlap 4460648 CTTAAGCAAACTAAA TTCCTTAGCT-A-ACCTACC GCA GGTAGGTATCAGCTTAGGAA TCAAAATGCTGATAG TERM 3990 4460662 - 4460648 - g 73 -10 -3.06312 | overlap 4460636 AAATTCCTTAGCTAA CCTACC GCA GGTAGG TATCAGCTTAGGAAT Ava_3581 4459977 - 4460903 + | auxin efflux carrier Ava_3582 4461478 - 4460960 - | phosphoribosyltransferase TERM 3991 4461812 - 4461823 + G 85 -4.4 -5.42605 | TGCTTTATGGGGCAA TTCC CTTT GGAA TTTTCTTTTTCTTAC TERM 3992 4462402 - 4462418 + G 72 -6.5 -4.35663 | CCCACAACGATGATT GCAGTGC AAG GGACTGC TTTATTGATGTTATT Ava_3583 4461544 - 4462971 + | galactoside symporter TERM 3993 4463321 - 4463355 + F 73 -9.4 -2.89 | overlap 4463326 4463329 TGGGGTAACAAATTT TGTAACAGCTGTGGCG CGG TGCTACAGTTGTTAGA TCGTTATGTGCCACT TERM 3994 4463326 - 4463350 + F 75 -9.3 -3.15677 | overlap 4463321 4463329 TAACAAATTTTGTAA CAGCTGTGGCG CGG TGCTACAGTTG TTAGATCGTTATGTG TERM 3995 4464035 - 4464047 + G 72 -6.2 -4.2803 | opp_overlap 4464034, overlap 4464035 CCAGAGTTGGAAGAT CCCC AGACG GGGG TTTTGCATTGGCGTA Ava_3584 4463339 - 4464976 + | Serine/threonine protein kinase TERM 3996 4465113 - 4465070 - f 79 -6.9 -4.46072 | gap 2, opp_overlap 4465075, overlap 4465074 4465076 TCTAACAAACACAAA TTAAGACCCCCTGACTGGTTA TTTA TATCTAGTCAGGGGG-C-TAA TATAGGTGATAGACT TERM 3997 4465110 - 4465074 - f 84 -10.2 -3.73525 | gap 1, opp_overlap 4465075, overlap 4465070 4465076 ACAAACACAAATTAA GACCCCCTGACTGGTTA TTTA TATCTAGTCAGGGGG-C TAATATAGGTGATAG TERM 3998 4465075 - 4465110 + F 85 -12.6 -2.65264 | opp_overlap 4465074 4465070 4465076 CAAACACAAATTAAG ACCCCCTGACTGGTTA TTTA TATCTAGTCAGGGGGC TAATATAGGTGATAG TERM 3999 4465109 - 4465076 - f 100 -13.9 -3.42613 | opp_overlap 4465075, overlap 4465074 4465070 AAACACAAATTAAGA CCCCCTGACTGGTTA TTTA TATCTAGTCAGGGGG CTAATATAGGTGATA TERM 4000 4466167 - 4466152 - g 78 -4 -5.22006 | gap 1 TCAGCAGAACAAAAA CAGCACA TTT TG-GCTG GACAACACAATTACT Ava_3585 4465555 - 4466292 + | phycocyanobilin:ferredoxin oxidoreductase TERM 4001 4466340 - 4466305 - f 83 -12 -2.60555 | opp_overlap 4466312, overlap 4466301 4466309 TAACCTGACAAGTCA TAGATCACCGACTTTT TTGA AACAGTCGGTGATCTG AACACCTGCAAAACT TERM 4002 4466336 - 4466309 - f 83 -11.4 -2.96711 | opp_overlap 4466312, overlap 4466305 4466301 CTGACAAGTCATAGA TCACCGACTTTT TTGA AACAGTCGGTGA TCTGAACACCTGCAA Ava_3586 4467191 - 4468615 + | secretion protein HlyD Ava_3587 4468656 - 4469813 + | DevC protein Ava_3588 4469941 - 4470675 + | ABC transporter-like Ava_3589 4471492 - 4470692 - | hypothetical protein Ava_3590 4471598 - 4472410 + | HAD family hydrolase TERM 4003 4474622 - 4474604 - g 75 -7.4 -4.28713 | opp_overlap 4474606, overlap 4474607 AACACGACGAAGAAA CAATCCGC GCT GCGGACTA TCTAGTTGATATTGG TERM 4004 4474619 - 4474607 - g 86 -9.1 -4.25016 | opp_overlap 4474606, overlap 4474604 ACGACGAAGAAACAA TCCGC GCT GCGGA CTATCTAGTTGATAT uvrA 4472899 - 4475796 + | excinuclease ABC subunit A Ava_3592 4476123 - 4477331 + | hypothetical protein Ava_3593 4477338 - 4477874 + | hypothetical protein TERM 4005 4477934 - 4477957 + T 73 -5.4 -4.68724 | TTCATAGTTAATACT GGTAATTAAT CGGT ATTTATTACC TTTTATATTGAATAC TERM 4006 4478387 - 4478355 - T 70 -2.9 -5.08601 | gap 1, opp_overlap 4478358, overlap 4478358 CTAGCGCAAGAAAAA GAAGACATATC-CA GTAAAT TGAGATATGTCTTT ATTATCGCATATCTA Ava_3594 4479267 - 4478407 - | MscS mechanosensitive ion channel TERM 4007 4478709 - 4478727 + g 70 -9.6 -2.8474 | opp_overlap 4478712, overlap 4478688 4478712 TTGCATCCGTAGGAT CAACTGCG TGA TGCAGTTG TGCTTGTAAGTCAAC TERM 4008 4479101 - 4479077 - G 75 -10.3 -2.82635 | opp_overlap 4479076 4479081, overlap 4479081 ATTTTCAGGATTACA TTAACTATATT CAC AATATAGTTAA CTAGTGTAGGCTCAA TERM 4009 4479503 - 4479481 - R 91 -6.3 -5.59879 | opp_overlap 4479499 TATAAACACAAAAAA GGTAAGCCA GAGAA TGACCTACC TTGTAGTTAATCCTT Ava_3595 4480418 - 4479564 - | MscS mechanosensitive ion channel TERM 4010 4480410 - 4480424 + g 70 -5.8 -4.25052 | CTGTCCAATTTGTGG GAAATT CAT AATTTC TTCTTATTTTAGTGT TERM 4011 4481629 - 4481612 - g 80 -9.9 -3.66666 | opp_overlap 4481611 4481610 4481608 TGCAAAATTGCCAAA TGGGGAA ACCA TTCCCCA AGTTGTTGGTGAGAT TERM 4012 4483086 - 4483066 - g 84 -5.3 -5.32882 | overlap 4483067 TACTACTACAAAAAA TCTCCCCCG CAG CGAGAGAGG AGCATATCTTTGAAA TERM 4013 4483085 - 4483067 - g 78 -8.8 -3.78644 | overlap 4483066 ACTACTACAAAAAAT CTCCCCCG CAG CGAGAGAG GAGCATATCTTTGAA TERM 4014 4483204 - 4483194 - g 74 -4.6 -4.84017 | opp_overlap 4483200 AATGCGGCACAAAAA GCCA GAG CGGC AACAGCTTATCAAGC TERM 4015 4483861 - 4483845 - g 72 -10.1 -2.78725 | overlap 4483842 ATAGCTTACCAACTA GCCTCCG AGC CAGAGGC GAAAAACGTTCGCGC Ava_3596 4480827 - 4486880 + | Serine/threonine protein kinase and Signal transduction histidine kinase (STHK) with GAF sensor TERM 4016 4486926 - 4486892 - T 74 -3.7 -5.1523 | overlap 4486899 TTGATAAGATAAAAA GACA-AAAGGGCATCTA AAA TAGATGCCCGTCATG-C AGGGAAAACTTTTAA TERM 4017 4486919 - 4486899 - T 100 -14.1 -5.02287 | overlap 4486892 GATAAAAAGACAAAA GGGCATCTA AAA TAGATGCCC GTCATGCAGGGAAAA Ava_3597 4488556 - 4487240 - | O-antigen polymerase Ava_3598 4489647 - 4488805 - | hypothetical protein Ava_3599 4489802 - 4490842 + | FAD dependent oxidoreductase TERM 4018 4491101 - 4491043 - f 100 -16.4 -2.8084 | gap 2, opp_overlap 4491043 4491044 4491045 4491071 ATAAATATCTAAGTA TCTGTAGGGTGGGCAATGCCCACC GTATCATATTTGT GGTGGGCATTGCCCACCCTA-AG- TATATTTTACGTTGA TERM 4019 4491044 - 4491101 + F 100 -26.7 -3.44792 | gap 1, opp_overlap 4491043, overlap 4491043 4491045 4491071 TAAATATCTAAGTAT CTGTAGGGTGGGCAATGCCCACCGTA TCATATT TGTGGTGGGCATTGCCCACCCTA-AG TATATTTTACGTTGA TERM 4020 4491045 - 4491103 + F 100 -17.1 -3.75051 | gap 2, opp_overlap 4491043, overlap 4491043 4491044 4491071 AAATATCTAAGTATC TG--TAGGGTGGGCAATGCCCACCGTA TCATATT TGTGGTGGGCATTGCCCACCCTAAGTA TATTTTACGTTGATC TERM 4021 4491071 - 4491105 + F 83 -8.6 -4.30014 | opp_overlap 4491043, overlap 4491043 4491044 4491045 CAATGCCCACCGTAT CATATTTGTGGTGGGC ATT GCCCACCCTAAGTATA TTTTACGTTGATCCC Ava_3600 4491438 - 4491818 + | hypothetical protein Ava_3601 4492381 - 4492148 - | hypothetical protein Ava_3602 4493406 - 4492486 - | Alpha/beta hydrolase fold TERM 4022 4493481 - 4493437 - R 100 -13.9 -3.6707 | opp_overlap 4493442, overlap 4493416 AGTCAATAGTCCAAA GTCGATAGTCAATAGTCAACA GTC TATTAACTATTGACCATTGAC TCATGACTACTAAGC clpX 4494831 - 4493491 - | ATP-dependent protease ATP-binding subunit Ava_3604 4495539 - 4494841 - | ATP-dependent Clp protease proteolytic subunit ClpP tig 4497296 - 4495881 - | trigger factor Ava_3606 4498293 - 4499336 + | aspartate-semialdehyde dehydrogenase TERM 4023 4499452 - 4499462 + F 72 -8.2 -3.5771 | opp_overlap 4499444 4499443, overlap 4499459 CTCAAACGCAGCTAT GCCC ACA GGGC TTTACAGCACTTTTT dapA 4499594 - 4500478 + | dihydrodipicolinate synthase Ava_3608 4500796 - 4502565 + | hypothetical protein TERM 4024 4502605 - 4502631 + T 83 -8.7 -4.35116 | opp_overlap 4502596 4502603 4502605 GCAAAGGCGCAAAGA CGCAAAGGCTC GTAAG GTGTCTTTGCG TTTTGCTGTGGGATA Ava_3609 4504053 - 4502851 - | arsenical pump membrane protein TERM 4025 4504352 - 4504366 + H 70 -3.5 -5.00616 | CAATTAACGTTATAT CGCTT TTTAT GAGCG TTTTTTCCCGACAAG Ava_3610 4504447 - 4504824 + | Mo-dependent nitrogenase-like TERM 4026 4504838 - 4504894 + T 100 -14.2 -5.40474 | opp_overlap 4504845 AGTCAATAGTCAACG GTCAATAGTCAATAGTTAAAAGCT AAAAATGAA GGTTTTGAACTATTGACTATTGAC TTTTTTTCCGCGCCT Ava_3611 4506836 - 4504887 - | peptidase C14, caspase catalytic subunit p20 TERM 4027 4504998 - 4505032 + g 73 -2.9 -5.10497 | gap 1, overlap 4505022 4505025 TGCAGCACTAAAATT TTCTTGATCGGCGCGA TTTT TAGCGA-GGTCAAGAA TTTTTTGACTCCATT TERM 4028 4506877 - 4506907 + H 70 -9.1 -3.0371 | CTTGCCTAAAATTGC GGTTGGCTTTGCT GAAAA AACAAAGCTAACC TATGTCTAATAGTCT Ava_3612 4507034 - 4507588 + | hypothetical protein rpmF 4507758 - 4507931 + | 50S ribosomal protein L32 TERM 4029 4507977 - 4507937 - f 100 -11.3 -5.97979 | opp_overlap 4507939, overlap 4507939 AGAAGAATAAAAAAA TAGGTAATGAGTAATTGGC AGA ACCTATTACCCATTACCTT TCACCCATGACTGAT TERM 4030 4507939 - 4507975 + F 84 -11 -3.55761 | opp_overlap 4507937 4507939 AAGAATAAAAAAATA GGTAATGAGTAATTGG CAGAA CCTATTACCCATTACC TTTCACCCATGACTG TERM 4031 4507975 - 4507939 - f 100 -13.9 -4.59954 | opp_overlap 4507939, overlap 4507937 AAGAATAAAAAAATA GGTAATGAGTAATTGGC AGA ACCTATTACCCATTACC TTTCACCCATGACTG Ava_3614 4508165 - 4508755 + | oxidoreductase, molybdopterin binding TERM 4032 4508751 - 4508806 + T 71 -4.3 -4.87665 | overlap 4508753 4508757 AAGAGGAAAGATACA GTTGATGGGAT-TGGTAATGGGTAATG GGAA TATTAGCCGTTACCAGATTCC-TCATC TTTTTGTGGGTGAGA TERM 4033 4508864 - 4508907 + T 86 -8.4 -4.43272 | opp_overlap 4508871, overlap 4508866 CAATCCCTAGTTCAA GGTAAAAGTCAAAAGGAAAA ATCT TTTACCTTTTAACTTTTAAC TTTTAACTTTTAACT TERM 4034 4508866 - 4508905 + T 71 -9.6 -2.54204 | opp_overlap 4508871, overlap 4508864 ATCCCTAGTTCAAGG TAAAAGTCAAAAGGAAAA ATCT TTTACCTTTTAACTTTTA ACTTTTAACTTTTAA TERM 4035 4508900 - 4508871 - T 75 -7.3 -4.2803 | opp_overlap 4508866 4508864 TAGTTCAAGGTAAAA GTCAAAAGGAAAA ATCT TTTACCTTTTAAC TTTTAACTTTTAACT Ava_3615 4510327 - 4508945 - | aldehyde dehydrogenase Ava_3616 4511561 - 4510380 - | response regulator receiver Signal transduction histidine kinase Ava_3617 4512121 - 4511861 - | hypothetical protein ureC 4513880 - 4512174 - | urease subunit alpha Ava_3619 4514001 - 4514378 + | hypothetical protein ureB 4514772 - 4514446 - | urease subunit beta ureA 4515086 - 4514784 - | urease subunit gamma Ava_3622 4515939 - 4515100 - | urease accessory protein UreD Ava_3623 4518740 - 4516074 - | hypothetical protein TERM 4036 4516196 - 4516183 - G 71 -2.4 -5.09225 | ATTTCACGTAAAAAA GAAG TAAATT CTTC AAAATCTGCTATGTC TERM 4037 4518123 - 4518153 + g 70 -5.6 -4.37199 | overlap 4518124 AGGTATTCTCACTTC ACCAAATATTTC TGCAATT GAAATATTTGGC TTTATTCCTTCTGGT Ava_3624 4519193 - 4518753 - | hypothetical protein Ava_3625 4520105 - 4519818 - | hypothetical protein TERM 4038 4520195 - 4520221 + r 91 -5.1 -5.87688 | opp_overlap 4520195 GAGTTAACAAAAAAA TAGCCACTTCC ACTAG GGAAGCAGCTA TTTTTTTTAACTTAT TERM 4039 4520221 - 4520195 - R 100 -9.5 -5.8187 | opp_overlap 4520195 GAGTTAACAAAAAAA TAGCCACTTCC ACTAG GGAAGCAGCTA TTTTTTTTAACTTAT groEL 4521885 - 4520251 - | chaperonin GroEL TERM 4040 4520367 - 4520385 + g 72 -9.6 -3.14878 | opp_overlap 4520366, overlap 4520355 4520364 CAGCGATGGAAGCAG CGTTTTGC AGT GCAGAACG TGTTACCTTCGCGGG TERM 4041 4520768 - 4520799 + g 79 -3 -5.40464 | opp_overlap 4520771 4520778, overlap 4520774 TTAACTACAGCTACA CCACCAGAAAGTTT AGCC AAACGTTCTTGTAG TTTTTCTTTGTCGTA TERM 4042 4520936 - 4520956 + g 74 -6.2 -4.4715 | gap 1, overlap 4520930 4520937 ATGCGGCGAGCTTTA C-CCAAGCT TTCC AGCTTGGTG TTTTCTAGCTTCAGA TERM 4043 4520937 - 4520954 + g 84 -9.9 -3.84304 | overlap 4520930 4520936 TGCGGCGAGCTTTAC CCAAGCT TTCC AGCTTGG TGTTTTCTAGCTTCA groES 4522293 - 4521982 - | co-chaperonin GroES Ava_3628 4523232 - 4523909 + | two component LuxR family transcriptional regulator TERM 4044 4523970 - 4523913 - T 100 -15.8 -3.37283 | opp_overlap 4523913 4523945, overlap 4523949 CAAATGGCTTAAATA GCTATCAGCATTCAGCCGTCAGCT TTGAAAAATT AACTGACAGCTGACAGCTGATAGC TTAAATTATTTGTTT TERM 4045 4523913 - 4523970 + T 85 -11.4 -3.38207 | opp_overlap 4523913 4523949, overlap 4523945 CAAATGGCTTAAATA GCTATCAGCATTCAGCCGTCAGCT TTGAAAAATT AACTGACAGCTGACAGCTGATAGC TTAAATTATTTGTTT Ava_3629 4525852 - 4524083 - | hemolysin-type calcium-binding region TERM 4046 4524951 - 4524969 + g 75 -7.5 -4.36127 | CCGACAATAATGTCA TCATAGG CTGTA CCTATGA TTTTCAATTGTTCGA asnC 4528168 - 4526777 - | asparaginyl-tRNA synthetase Ava_3631 4528533 - 4528171 - | hypothetical protein Ava_3632 4528623 - 4528919 + | hypothetical protein Ava_3633 4529419 - 4528970 - | putative anti-sigma regulatory factor (Ser/Thr protein kinase) TERM 4047 4529401 - 4529388 - G 70 -8.1 -3.66286 | ATAGTACCCCAATAA CGTCC AACT GGACG GAGCGAAATGGTTAT Ava_3634 4531209 - 4529827 - | 23S rRNA methyltransferase/RumA Ava_3635 4531329 - 4531814 + | phycobilisome protein TERM 4048 4531995 - 4532041 + F 78 -6.7 -4.57837 | gap 1, opp_overlap 4532012, overlap 4531985 4531996 4531999 4532002 TTTATTGCGCTTTGC GTGTCAGTTGTTAGAGACGCGA TTAA TCGCGTCTGT-ACAATTGTCAG TTTTTGAGAGGATCT TERM 4049 4531996 - 4532040 + F 78 -10.2 -3.3422 | gap 1, opp_overlap 4532012, overlap 4531985 4531995 4531999 4532002 TTATTGCGCTTTGCG TGTCAGTTGTTAGAGACGCGA TTAA TCGCGTCTGT-ACAATTGTCA GTTTTTGAGAGGATC TERM 4050 4531999 - 4532037 + F 77 -10.5 -2.83903 | gap 1, opp_overlap 4532012, overlap 4531996 4531995 4532002 TTGCGCTTTGCGTGT CAGTTGTTAGAGACGCGA TTAA TCGCGTCTGT-ACAATTG TCAGTTTTTGAGAGG TERM 4051 4532002 - 4532034 + F 75 -8.6 -3.5616 | gap 1, opp_overlap 4532012, overlap 4531999 4531996 4531995 CGCTTTGCGTGTCAG TTGTTAGAGACGCGA TTAA TCGCGTCTGT-ACAA TTGTCAGTTTTTGAG TERM 4052 4532136 - 4532157 + F 81 -4.4 -5.34309 | TGACTACTGACAAAA CTCTATCC CCTTGT GGGTGGAG TTTTTATTTAATCAT TERM 4053 4532225 - 4532198 - f 100 -10 -5.63517 | gap 1 TTCCCAAACAAAAAA CCGACAA-CTTCT TGT AGAAGACTGTCGG CAATTAGTGTGTTCC TERM 4054 4532326 - 4532341 + F 76 -6.2 -4.5448 | overlap 4532316 4532324 TTAATCATAGACCTA TGTGAT TGTT ATCACA TTATTTTTCTGAATA Ava_3636 4532770 - 4535103 + | phosphoribosylformylglycinamidine synthase II TERM 4055 4535939 - 4535976 + G 74 -9.2 -3.25719 | CTTAGTTATTGGCAC TCCCGTTGGTGTGATG GGGGTG CGTGACACCAACGGCA TTCGTCCTCTGGTCA Ava_3637 4535343 - 4536842 + | amidophosphoribosyltransferase Ava_3638 4537797 - 4537045 - | ABC transporter-like Ava_3639 4539036 - 4537870 - | DevC protein Ava_3640 4540428 - 4539124 - | heterocyst specific ABC-transporter, membrane fusion protein DevB TERM 4056 4539162 - 4539186 + g 81 -4.3 -5.27399 | opp_overlap 4539180, overlap 4539156 4539163 4539182 CAATTGCTGCTTGTA CTTGCAAGTTT GTG AAACCTGCAAC TTTTTTGCTGTCTTC TERM 4057 4539163 - 4539185 + g 72 -7.8 -3.74813 | opp_overlap 4539180, overlap 4539156 4539162 4539182 AATTGCTGCTTGTAC TTGCAAGTTT GTG AAACCTGCAA CTTTTTTGCTGTCTT TERM 4058 4539916 - 4539941 + g 100 -10.5 -4.53419 | GATTCTGTCACCTTG CCATTGCGC TTCTATCC GCGCAATGG TTTGTTGTTGTCCTG Ava_3641 4541072 - 4540470 - | TetR family transcriptional regulator TERM 4059 4540570 - 4540586 + g 73 -5.1 -4.58395 | overlap 4540571 TCTTGAAAATTAATT GTCTGGT TGC ACCAGAG TTTTTCCAAAATCAA TERM 4060 4541211 - 4541196 - R 74 -7.6 -3.86897 | opp_overlap 4541199 4541204 4541205 GTGACTTTGCATAAA CCAGAA TTTT TTCTGG TTGCACCAAAAAGCT TERM 4061 4541242 - 4541224 - R 78 -6 -4.72272 | opp_overlap 4541199 4541205, overlap 4541225 TGGTTGCACCAAAAA GCTTCTTG TTG CAAGAAGA AATATTAAATCAATA TERM 4062 4541241 - 4541225 - R 76 -9.5 -3.43042 | opp_overlap 4541199 4541205, overlap 4541224 GGTTGCACCAAAAAG CTTCTTG TTG CAAGAAG AAATATTAAATCAAT TERM 4063 4541363 - 4541384 + r 87 -11.7 -3.63837 | GCGTGCAGAGAGTGC GATCGCTAT ATGT ATAGCGATC TTCTTCAGAGATTGT Ava_3642 4543249 - 4541435 - | aspartate kinase TERM 4064 4542293 - 4542325 + g 100 -14.3 -3.23598 | TTTTAATATAGGTGT GGTAACAGTAAAGGC GAT GTCGTTACTGTTACC TTCATGGATTGATTG TERM 4065 4543519 - 4543498 - H 76 -4.3 -5.0916 | TGTTGAACAGAAAAA TTGTGGGCG CGAT CGCCTGCAA TATCGACATATTAGG TERM 4066 4543581 - 4543611 + H 100 -11.3 -6.28967 | opp_overlap 4543585 ATATCCAGAGGCTCA GATACCGGACT TCTTGAAAT AGTCCGGTATC TTTTTTTTGTTTGTA Ava_3643 4543785 - 4547327 + | Na-Ca exchanger/integrin-beta4 TERM 4067 4547332 - 4547369 + T 100 -18.1 -4.57569 | gap 1, opp_overlap 4547336 4547338 4547340, overlap 4547336 4547365 TAATTGCCTAGCCAT CATAGATACCCGACTTTT TTG AAAAGTCGGGTATCT-TG TTTTTCACAAGGTAA TERM 4068 4547366 - 4547336 - T 100 -20 -2.80816 | opp_overlap 4547332 4547336 4547365, overlap 4547338 4547340 TGCCTAGCCATCATA GATACCCGACTTTT TTG AAAAGTCGGGTATC TTGTTTTTCACAAGG TERM 4069 4547336 - 4547366 + T 100 -20 -4.40561 | opp_overlap 4547336 4547338 4547340, overlap 4547332 4547365 TGCCTAGCCATCATA GATACCCGACTTTT TTG AAAAGTCGGGTATC TTGTTTTTCACAAGG TERM 4070 4547364 - 4547338 - T 100 -16.8 -2.95298 | opp_overlap 4547336 4547332, overlap 4547336 4547340 CCTAGCCATCATAGA TACCCGACTTTT TTG AAAAGTCGGGTA TCTTGTTTTTCACAA TERM 4071 4547362 - 4547340 - T 100 -15 -3.02947 | opp_overlap 4547336 4547332, overlap 4547338 4547336 TAGCCATCATAGATA CCCGACTTTT TTG AAAAGTCGGG TATCTTGTTTTTCAC Ava_3644 4548446 - 4547424 - | curli production assembly/transport component CsgG TERM 4072 4548195 - 4548179 - G 71 -8.7 -3.3785 | opp_overlap 4548179 CTAACCTATTTACAA GGATGTC ACT GACACCC TTACTACCTGCGGGA TERM 4073 4548637 - 4548610 - R 78 -8.6 -3.64755 | ATATATGCGGAAGAA TGAAAAATTCAC ATAT GAGAATTTTTCA TGAAGTTAATTATCT TERM 4074 4548826 - 4548806 - R 100 -11.1 -5.46657 | opp_overlap 4548806 CAGCGCAATAAAAAA GGGCAGGCA TTA TGCCCACCC TATAGTTAATGTAAG Ava_3645 4550871 - 4548859 - | transketolase TERM 4075 4550021 - 4550002 - G 73 -5.7 -4.44667 | overlap 4550004 TTCGGGAACAACAAA TGGGTCG TGTGAC CAACCCA GATTTTGACGAGTTA TERM 4076 4550774 - 4550787 + g 70 -3.7 -4.84033 | overlap 4550775 GCGCCCATCGGTAGT CCGGG GTGT CCCGA TTTTGCTTTTTCTAT TERM 4077 4551046 - 4551071 + r 84 -11.9 -2.85446 | TCCTCATCATCCCAT TCCCGATTGTC CGTG GACAAGCGGGA TCTCCTGAGTTTGTG Ava_3646 4552502 - 4551252 - | 3-oxoacyl-(acyl carrier protein) synthase II TERM 4078 4552642 - 4552607 - R 90 -12.6 -3.1552 | gap 1, overlap 4552610 GGGGAGGCAGGAAGA GAAGT-CGCAAGGAGGG TTT CCCTCCGGGCGAACTTC GGGGAGGCAGGGGGA TERM 4079 4552638 - 4552610 - R 78 -8.7 -3.71998 | overlap 4552607 GAGGCAGGAAGAGAA GTCGCAAGGAGGG TTT CCCTCCGGGCGAA CTTCGGGGAGGCAGG Ava_3647 4553029 - 4552775 - | Acyl carrier protein (ACP) Ava_3648 4553466 - 4554371 + | succinate dehydrogenase subunit C Ava_3649 4554947 - 4554459 - | camphor resistance protein CrcB Ava_3650 4556268 - 4554961 - | dihydroorotase Ava_3651 4557667 - 4556318 - | phosphoglycerate/bisphosphoglycerate mutase TERM 4080 4556367 - 4556352 - G 77 -10.4 -3.10344 | opp_overlap 4556349 4556348 4556352 GTTTTATCTAATACA CCACCC AAAT GGGTGG TAATATTCATGGCTT TERM 4081 4556352 - 4556367 + g 75 -10.4 -2.78266 | opp_overlap 4556352, overlap 4556349 4556348 GTTTTATCTAATACA CCACCC AAAT GGGTGG TAATATTCATGGCTT Ava_3652 4558184 - 4557840 - | hypothetical protein Ava_3653 4559464 - 4558580 - | 3-beta hydroxysteroid dehydrogenase/isomerase Ava_3654 4559578 - 4560399 + | nitrate transport permease Ava_3655 4560610 - 4561401 + | nitrate transport ATP-binding subunits C and D Ava_3656 4561489 - 4562772 + | twin-arginine translocation pathway signal Ava_3657 4562805 - 4563389 + | pentapeptide repeat-containing protein Ava_3658 4565635 - 4563467 - | DEAD/DEAH box helicase-like TERM 4082 4564365 - 4564342 - G 77 -11 -2.78679 | overlap 4564341 4564344 CCTGTTTAGCTAAAT CAGCAGGGGA AATT TCCCCCACTG CAACTAAAATACTCA TERM 4083 4565266 - 4565276 + g 74 -6.8 -4.386 | opp_overlap 4565266 GTGTAATTTGGAGAA TCCC TTG GGGA TTTTGTAGAAGCTTA TERM 4084 4565644 - 4565701 + r 100 -13.7 -3.32698 | gap 1, opp_overlap 4565686, overlap 4565638 4565638 4565655 4565682 TAGTCATTATTTGGA GACGCGATTCATCGCGTCTGTA-CAA TTGTTTT TTGTTAGAGACGCGATTTATCGCGTC TGTTGTCTCCAATCC TERM 4085 4565682 - 4565703 + r 75 -8.7 -3.50393 | opp_overlap 4565686, overlap 4565655 4565644 AATTGTTTTTTGTTA GAGACGCGA TTTA TCGCGTCTG TTGTCTCCAATCCCA TERM 4086 4565751 - 4565737 - R 100 -9.2 -5.25893 | ATAGACATGAAAAAA CCCGGC TTG ACCGGG CAGATGTACTGTTTG Ava_3659 4566161 - 4565787 - | hypothetical protein TERM 4087 4566742 - 4566720 - H 73 -2.1 -5.252 | GATGGTTATAAAAAA TACAAAG TAGAAAGGG CTTTGTA ATGAAGTGTTACTTA Ava_3660 4566866 - 4568161 + | pilus retraction protein PilT Ava_3661 4568332 - 4569096 + | KaiB Ava_3662 4569247 - 4569489 + | hypothetical protein Ava_3663 4570205 - 4569486 - | hypothetical protein Ava_3664 4571781 - 4570351 - | hypothetical protein TERM 4088 4571545 - 4571521 - G 75 -2.2 -5.38958 | opp_overlap 4571526, overlap 4571525 4571526 ACTCACAAAGAAAAA TAAACTCATC ATCAA GATGAATTTG ACTTCCCGTGACCAA TERM 4089 4571541 - 4571525 - G 75 -3 -5.1502 | opp_overlap 4571526, overlap 4571521 4571526 ACAAAGAAAAATAAA CTCATC ATCAA GATGAA TTTGACTTCCCGTGA TERM 4090 4572603 - 4572588 - g 70 -2.6 -5.07107 | CAAATCGCCAAAAAA GAATCA TCGC TAATTC TGCACAAATTGTTGC Ava_3665 4571951 - 4572919 + | Fmu (Sun)/nucleolar NOL1/Nop2p TERM 4091 4572981 - 4572953 - T 95 -13.3 -3.11303 | opp_overlap 4572952 4572951, overlap 4572950 4572958 TGAATATACAAATTA TCAAAGGACACAA TAT TTGCGTCCCTTGA GGTTGTATTAGAGGA TERM 4092 4572976 - 4572958 - T 83 -9.6 -3.918 | opp_overlap 4572952 4572951, overlap 4572953 4572950 ATACAAATTATCAAA GGACACAA TAT TTGCGTCC CTTGAGGTTGTATTA Ava_3666 4573379 - 4573005 - | hypothetical protein TERM 4093 4573592 - 4573618 + H 100 -15.2 -2.78935 | TTATCAGTGGCCACA TCCCCGACTTCT TCA AGAAGTCGGGGC TATAGTCGGGGATGT Ava_3667 4573731 - 4574111 + | hypothetical protein Ava_3668 4574668 - 4574108 - | hexapaptide repeat-containing transferase Ava_3669 4576011 - 4574713 - | response regulator receiver modulated diguanylate cyclase with PAS/PAC sensor Ava_3670 4576335 - 4577846 + | NHL repeat-containing protein TERM 4094 4578754 - 4578771 + G 77 -3.5 -5.2166 | gap 1 AATATAGTGGAAGAT TTTAG-CG ATT CGACTAAA TTTTTTCAATTATTA Ava_3671 4578115 - 4578810 + | haloacid dehalogenase-like hydrolase Ava_3672 4578814 - 4579161 + | hypothetical protein Ava_3673 4579162 - 4579356 + | hypothetical protein Ava_3674 4579353 - 4580747 + | amidase TERM 4095 4580844 - 4580868 + F 72 -9.3 -2.72511 | opp_overlap 4580832 4580846, overlap 4580843 ATACTGTTGGCGAAT TATTGAGGGGT TAA GCCCCTCAAGA GTTTGGAACAGTGGA TERM 4096 4580866 - 4580846 - f 78 -11.2 -2.71011 | opp_overlap 4580844 4580843, overlap 4580832 ACTGTTGGCGAATTA TTGAGGGG TTAAG CCCCTCAA GAGTTTGGAACAGTG TERM 4097 4582058 - 4582045 - g 74 -6.7 -4.3129 | opp_overlap 4582045 GATTTAGTAGGAAAA GTTCC CCCC GGAAC TAGTTGGCAAGCAAC Ava_3675 4581013 - 4582581 + | transposase IS4 TERM 4098 4582762 - 4582748 - T 93 -12.8 -3.30124 | overlap 4582728 CGCCAGTCGCTACAA CGGGGG GAA CCCCCG CAACGCGCTGGCTCA Ava_3676 4583647 - 4582820 - | methionine aminopeptidase Ava_3677 4584255 - 4583782 - | hypothetical protein TERM 4099 4584376 - 4584390 + r 93 -12.8 -3.30124 | overlap 4584359 TGAGCCAGCGCGTTG CGGGGG TTC CCCCCG TTGTAGCGACTGGCG Ava_3678 4587327 - 4584490 - | peptidase M16-like TERM 4100 4587309 - 4587296 - G 75 -3.1 -5.1383 | overlap 4587297 AATAACACATAAAAA CGGTA TCGA TACCA GATAGATAATGCAGA Ava_3679 4587869 - 4587441 - | glyoxalase/bleomycin resistance protein/dioxygenase TERM 4101 4587964 - 4587979 + r 75 -5.4 -4.88918 | gap 1, overlap 4587961 4587964 GAGTGCAGCCATTCG CC-CACC AGG GGTGAGG TTTTGTTTCCCGTAG TERM 4102 4588026 - 4588079 + r 78 -9 -3.66018 | gap 1, overlap 4588028 CTATAAAGTTTTCGC TTGT-AGTGGTCAGTAGTCAGTTGT GGATA ACTACTGACCACTGACCACTGACTC TTATTCAAATAATCG TERM 4103 4588028 - 4588077 + r 100 -16 -3.40878 | gap 1, overlap 4588026 ATAAAGTTTTCGCTT GT-AGTGGTCAGTAGTCAGTTGT GGATA ACTACTGACCACTGACCACTGAC TCTTATTCAAATAAT Ava_3680 4588592 - 4588080 - | hypothetical protein Ava_3681 4588754 - 4589362 + | hexapaptide repeat-containing transferase pbsY 4589552 - 4589677 + | photosystem II protein Y TERM 4104 4589705 - 4589733 + F 95 -12.6 -4.3467 | gap 1 AATTTTAACTTTGCA CCGACTGTTCTCT TTAC AGAGA-CAGTCGG TTTTAGTATGGGGAT Ava_3683 4589809 - 4591059 + | folylpolyglutamate synthetase Ava_3684 4591462 - 4592250 + | methyltransferase FkbM TERM 4105 4592372 - 4592398 + T 84 -12.4 -2.86185 | ACAACCTTTAAGCCT CTTGGGGTTTAC GGA GTAAACCCCAAA TCATTACTTGACTTT Ava_3685 4593815 - 4592517 - | extracellular solute-binding protein TERM 4106 4592672 - 4592690 + g 77 -4.5 -4.95155 | CTTGTTGTAATTGCT GCGCG CTGACAACT CGCGC TTTTTCTACTGTGGA TERM 4107 4593899 - 4593889 - H 95 -8.2 -4.89521 | ATAGGCTAAATAAAA CCGC GTT GCGG AGTCATTAGTCTTTA TERM 4108 4594319 - 4594282 - g 87 -5.5 -5.48054 | opp_overlap 4594285, overlap 4594285 AGCAAAATCAAAAAA GTATCTCGTGTGGCTAC TGGT GTACCCGGACGAGATTC CATTGTCCGCATCAT Ava_3686 4594048 - 4595157 + | Type IV pilus assembly protein PilM Ava_3687 4595260 - 4596027 + | fimbrial assembly Ava_3688 4596024 - 4596785 + | type IV pilus assembly protein PilO TERM 4109 4598745 - 4598735 - g 76 -6.8 -4.42386 | GGCTCAGGTACAAAA TGGC AAC GCCA AAGTTTTGACTGATC Ava_3689 4596903 - 4599338 + | type II and III secretion system protein Ava_3690 4599798 - 4599472 - | XRE family transcriptional regulator Ava_3691 4600166 - 4599795 - | hypothetical protein Ava_3692 4600745 - 4600305 - | cyclic nucleotide-binding domain-containing protein TERM 4110 4600885 - 4600905 + H 86 -9.7 -4.14945 | opp_overlap 4600886, overlap 4600886 4600899 TTTTGATCCCCCTAA ATCCCCCTT TTT AAGGGGGAC TTTGATTCTTGTTCC TERM 4111 4600904 - 4600886 - H 100 -13.2 -3.54424 | opp_overlap 4600885 4600886 4600899 TTTGATCCCCCTAAA TCCCCCTT TTT AAGGGGGA CTTTGATTCTTGTTC TERM 4112 4600886 - 4600904 + H 93 -13.2 -3.07882 | opp_overlap 4600886, overlap 4600885 4600899 TTTGATCCCCCTAAA TCCCCCTT TTT AAGGGGGA CTTTGATTCTTGTTC Ava_3693 4601220 - 4604210 + | hypothetical protein Ava_3694 4604363 - 4604611 + | hypothetical protein TERM 4113 4605069 - 4605083 + G 76 -7.8 -4.21631 | TTTATATAAAGCTGT GGAGGG TAT TCCTCC TTTGTTGAATGCGTT Ava_3695 4604878 - 4606053 + | aspartate aminotransferase TERM 4114 4606172 - 4606207 + F 100 -12 -4.41348 | opp_overlap 4606183, overlap 4606175 ATGCACTTTATTCTG TACTGTAGAGACGTTG CATG CAACGTCTCTACATCA TTTATTTGAGGCAGC TERM 4115 4606175 - 4606204 + F 100 -18.1 -3.18452 | opp_overlap 4606183, overlap 4606172 CACTTTATTCTGTAC TGTAGAGACGTTG CATG CAACGTCTCTACA TCATTTATTTGAGGC Ava_3696 4606359 - 4606796 + | hypothetical protein TERM 4116 4607132 - 4607111 - g 71 -6.7 -4.2354 | gap 1 TAAAGGCGAAAAGAA TACTGCTGAC CAA GT-AGCAGTA GAAGCAATGCGGGAG glpX 4607022 - 4608059 + | fructose 1,6-bisphosphatase II hemA 4608288 - 4609574 + | glutamyl-tRNA reductase Ava_3700 4609911 - 4609567 - | hypothetical protein TERM 4117 4609595 - 4609653 + g 71 -8.3 -3.40566 | gap 1 GGTATAGGGGTATAG GGGTGTAAGGGTATAGGGGAAAGAGT AAAACTAA ATTCTTCCCTC-ACACCCTCACACCC TTCTAAATCTCCTCT TERM 4118 4610048 - 4610006 - R 100 -17.3 -4.59342 | gap 1, opp_overlap 4610004 4610003 TGTACTATAAATAAA TGAGCGATCGCCACACGATA TTAT CATC-TATGGCGATCGCTCA AACTTATTGCCTAAA Ava_3701 4610240 - 4610067 - | hypothetical protein Ava_3702 4610455 - 4611045 + | ArsR family transcriptional regulator Ava_3703 4611139 - 4612050 + | hypothetical protein TERM 4119 4612115 - 4612153 + T 77 -10.5 -2.79749 | opp_overlap 4612123, overlap 4612114 4612123 ATATTAAGTAGGGGA GGCAA-AAAGCGGTGTAGA TGT TCTTC-CCGCTTTATTGCC GTTGTGTTACGGCTA TERM 4120 4612144 - 4612123 - T 71 -5.1 -4.66609 | gap 1, opp_overlap 4612115 4612114 4612123 TAGGGGAGGCAAAAA GCGGTGTAGA TGT TCTTC-CCGC TTTATTGCCGTTGTG TERM 4121 4612239 - 4612204 - T 79 -11.3 -2.8763 | gap 2, overlap 4612201 4612200 AGACAAGAAAATTCA GCCGTAACGCACCATCC ATGA GG-CGGTGCGTTA-GGC GCGAGGATAGTTATT TERM 4122 4612322 - 4612308 - T 85 -11.4 -3.30124 | overlap 4612293 4612312 CGCCAGTTGCTACAA CGGAGG GAA CCTCCG CAACGCACTGGCTCC Ava_3704 4613226 - 4612444 - | ABC transporter-like Ava_3705 4614349 - 4613216 - | inner-membrane translocator TERM 4123 4613775 - 4613764 - G 70 -5.8 -4.40003 | CCCCAGAAATATAAA TGGC TGTT GCCA ATAACCCTAAAATAA Ava_3706 4614585 - 4614782 + | hypothetical protein Ava_3707 4614816 - 4615154 + | hypothetical protein TERM 4124 4615761 - 4615772 + G 70 -5.8 -4.33274 | TGCGGAATAATCTTG CCAG CACC CTGG TTTTAGTCATCTCCA TERM 4125 4615875 - 4615838 - g 71 -2.2 -5.20154 | gap 2, overlap 4615840 ATAGAAGTTAAAAAA GCCTACGCTGGACAAAAT TTAG ATTTTGCCCAG--TATGC AGTAGCTATTACTAG TERM 4126 4616511 - 4616537 + G 70 -8.1 -3.65294 | opp_overlap 4616515, overlap 4616506 TGACGATTCCCCAAG TTAACGCCC GTACCGTTG GGGCGTTAA TTGCTTTGTATGAAC pgi 4615259 - 4616845 + | glucose-6-phosphate isomerase TERM 4127 4616917 - 4616960 + T 88 -7.6 -4.83615 | opp_overlap 4616917 4616924, overlap 4616919 GGGGACTGGGTAATA GGCAAAAGTCAGAAGAAAAA ATCT TTTACCTTTTGACTTTTGAC TTTTTGTCCCCAATC Ava_3709 4618486 - 4616978 - | 3-octaprenyl-4hydroxybenzoate decarboxylase TERM 4128 4618177 - 4618201 + g 73 -5.7 -4.56133 | overlap 4618178 CTTTACCAAAATCTA TCGCCTGAGAA ATT TTCTTAGGGGG TTTTGGTTGTTGCAA Ava_3710 4618705 - 4620096 + | retinal pigment epithelial membrane protein TERM 4129 4620121 - 4620097 - f 85 -10.1 -3.83318 | opp_overlap 4620102 TTTGGAAGAATATAA TTACAGGTAGC TTT GCTACCTTTAA AGCTTTTCATCTGTG TERM 4130 4620102 - 4620116 + F 84 -10 -3.67068 | opp_overlap 4620097 AAGAATATAATTACA GGTAGC TTT GCTACC TTTAAAGCTTTTCAT TERM 4131 4620236 - 4620222 - g 73 -7.2 -4.15833 | overlap 4620234 ACTACTAGTTTAAAA GAGTTT TTA AAACTC CCATACATAGATGAG Ava_3711 4620186 - 4620752 + | hypothetical protein Ava_3712 4621160 - 4620765 - | protein tyrosine phosphatase Ava_3713 4622338 - 4621208 - | arsenical-resistance protein ACR3 TERM 4132 4621353 - 4621333 - G 100 -9.7 -4.43309 | GAACTTCAATTAAAA CACCCACCA CTG TGGCGAGTG CAGCGCCAGAGTTCA TERM 4133 4621824 - 4621814 - G 75 -5.4 -4.83169 | AGGTGCGTACAAAAA TAGC ATT GCTA GAGAATTAACAGCCA Ava_3714 4623603 - 4622344 - | major facilitator transporter TERM 4134 4623774 - 4623808 + r 100 -15.8 -3.19192 | opp_overlap 4623773 TACTCAGTTATAGAT TTTCAGCCCCTTCCCT TGT AGGGAAGGGGTTGGGG TTAGGTTCCGTCGAA Ava_3715 4624864 - 4623851 - | glyceraldehyde-3-phosphate dehydrogenase Ava_3716 4626016 - 4624958 - | phosphate binding protein TERM 4135 4626081 - 4626070 - R 85 -3 -5.78622 | TCATTTCAAAAAAAA TTGA TATG TCAA CCAAGGTGGGGCTAC Ava_3717 4627414 - 4626275 - | cobalamin synthesis protein/P47K TERM 4136 4628180 - 4628160 - g 81 -4 -5.26875 | opp_overlap 4628160 CTCCGAACCAAAAAA GCAACATC CTTTT GATTTTGC CTTGTGGAAAGCAGC cysS 4627621 - 4629081 + | cysteinyl-tRNA synthetase Ava_3719 4629189 - 4630625 + | peptidase U62, modulator of DNA gyrase TERM 4137 4630816 - 4630806 - g 71 -4 -4.76171 | overlap 4630813 TAAAAAATTAGAAAA TGAA CAA TTCA CTGTGAAACTTAGCA Ava_3720 4630726 - 4632072 + | hypothetical protein Ava_3721 4632332 - 4633738 + | histidine kinase TERM 4138 4633914 - 4633903 - f 80 -5.8 -5.02074 | opp_overlap 4633886 4633883, overlap 4633886 4633883 TTAGTTCTCAAAAAA GGAC TAAA GTCC TTACTACAAAACTAA Ava_3722 4634527 - 4634916 + | anti-sigma-factor antagonist domain-containing protein Ava_3723 4636049 - 4634913 - | response regulator receiver (CheY) modulated Serine phosphatase Ava_3724 4636897 - 4636130 - | hypothetical protein Ava_3725 4637786 - 4637061 - | hypothetical protein TERM 4139 4637501 - 4637488 - G 78 -2.3 -5.49569 | CAGTAATATAAAAAA GTCTG TGTA CTGAC AACACCTAAAAAACT TERM 4140 4637865 - 4637877 + H 79 -4.9 -5.2015 | CTGAGGTTGCTGTGA TTTTG TCT CAAAA TTTTTATATTATTAA Ava_3726 4637923 - 4638207 + | hypothetical protein TERM 4141 4638765 - 4638754 - g 70 -5.8 -4.38712 | GGCACCTTTAGAAAA TCGG ATTG CCGA ATTGGAACAGCAGTT Ava_3727 4638197 - 4638835 + | pyridoxamine 5'-phosphate oxidase-related, FMN-binding Ava_3728 4638956 - 4639324 + | photosystem II protein PsbW, class I Ava_3729 4640419 - 4639397 - | TPR-related region Ava_3730 4642057 - 4640774 - | acetylornithine aminotransferase Ava_3731 4642256 - 4643272 + | hypothetical protein Ava_3732 4644404 - 4643496 - | SSU ribosomal protein S1P Ava_3733 4645292 - 4644546 - | dienelactone hydrolase TERM 4142 4644586 - 4644612 + g 86 -11.7 -3.35679 | gap 1, opp_overlap 4644595, overlap 4644578 AGTTGTTGCACCTGC TCC-CAAGCAGC AGCT GCTGCTTGAGGA TTATAGCTGGCACGA Ava_3734 4645494 - 4646477 + | GntR family transcriptional regulator TERM 4143 4646628 - 4646617 - T 89 -5.8 -5.28481 | CACTGAACCAAAAAA CCCT TCTG AGGG TGGTCAATAGTCCAC Ava_3735 4649276 - 4646694 - | adenylate/guanylate cyclase TERM 4144 4646764 - 4646799 + g 80 -10.6 -3.54 | gap 1, opp_overlap 4646761 4646774, overlap 4646763 4646771 GATTGTAGCCAATGC TGACAACGTAGCAGATG CAA CATC-GCTGCTTTGTCA TGTTTATCAACTGCT TERM 4145 4648095 - 4648108 + g 78 -2.3 -5.48028 | overlap 4648095 ATCTGGATTATAAGG CGGGA ACTC TCCGG TTTTCTTTTTATTTA Ava_3736 4649883 - 4650245 + | hypothetical protein TERM 4146 4650770 - 4650780 + G 100 -6.8 -5.75342 | opp_overlap 4650770 TTTGTTTGTGATTAA TCCC AAT GGGA TTTTTTTTGGGCCGA Ava_3737 4650372 - 4652789 + | filamentous haemagglutinin-like TERM 4147 4652989 - 4653026 + T 80 -8.7 -3.86346 | opp_overlap 4652989, overlap 4653002 TTTGCCGTTTTGAAA TTGTTGATATAAACTGA ATTC TCGGTTTATATCAAGGA TTTATCCAAAAATGA Ava_3738 4653787 - 4653215 - | hypothetical protein Ava_3739 4654653 - 4654318 - | hypothetical protein Ava_3740 4655102 - 4654650 - | pyridoxamine 5'-phosphate oxidase-related, FMN-binding TERM 4148 4655511 - 4655476 - R 100 -12 -4.41348 | opp_overlap 4655487, overlap 4655479 GCTGCGCCAAATAAA TGATGTAGAGACGTTG CTTG CAACGTCTCTACAGTA CAGAATAAAGTGCAT TERM 4149 4655508 - 4655479 - R 100 -18.1 -3.18452 | opp_overlap 4655487, overlap 4655476 GCGCCAAATAAATGA TGTAGAGACGTTG CTTG CAACGTCTCTACA GTACAGAATAAAGTG Ava_3741 4657201 - 4655609 - | twin-arginine translocation pathway signal TERM 4150 4657266 - 4657246 - H 79 -3.3 -5.52096 | opp_overlap 4657247, overlap 4657247 AAAGGGAATAAAAAA GCTAGATAA TGG TCATCTAGT TGTTAAGAAAATTGA TERM 4151 4657401 - 4657378 - H 100 -9.6 -5.33026 | TAATGGAAATAAAAA TACCCCCATA TTTT TGTGGGGGTA GGAAGGTTTTTAATG TERM 4152 4658653 - 4658639 - g 73 -10 -3.0264 | AAATTTGGGTGAATA CTTCCG AGG CGGAAG CCTCTCCGGCGCTGA Ava_3742 4657711 - 4658973 + | bifunctional sterol desaturase/short chain dehydrogenase TERM 4153 4659057 - 4659045 - f 76 -3.5 -5.26875 | overlap 4659050 GTTTTAATCAAAAAA TAAAT TAA ATTTA AACAATTTATTCAAA Ava_3743 4659090 - 4659638 + | hypothetical protein TERM 4154 4660180 - 4660148 - g 100 -9.8 -4.87626 | TTTTAATACCAAAAA TCCCGACCCCGACG ATTCG CGTTGGAGTCGTGA TGATCCACATACAAC Ava_3744 4659756 - 4660646 + | hypothetical protein TERM 4155 4660765 - 4660786 + T 95 -8 -5.38958 | opp_overlap 4660765 TGACTACTGACAAAA CTCCATCC CCTTGT GGGTGGAG TTTTTATTTCTAGCT TERM 4156 4660786 - 4660765 - T 76 -6.6 -4.43844 | gap 1, opp_overlap 4660765 TGACTACTGACAAAA CTCCATCCC CTTGT GGG-TGGAG TTTTTATTTCTAGCT TERM 4157 4660797 - 4660852 + T 100 -14.4 -3.89131 | gap 1 TGGAGTTTTTATTTC TAGCTTTTTAGTCAGCACTTTAGTACT AAA AGAAATAAAGTGCTGACTAC-AAGCTA TTTAATAATTATTCA Ava_3745 4662039 - 4660870 - | glycerophosphoryl diester phosphodiesterase TERM 4158 4661614 - 4661630 + g 70 -2.9 -5.01845 | overlap 4661628 GATACCAGGAATTCT CTCTATG GCG CGGAGAG TTTTTAATTCTTCTA Ava_3746 4662517 - 4663398 + | hypothetical protein gatA 4664935 - 4663475 - | aspartyl/glutamyl-tRNA amidotransferase subunit A TERM 4159 4663680 - 4663695 + g 79 -3.2 -5.33785 | opp_overlap 4663680 TCGTTTAAGTACATA CTGATG GGGT CAGCAG TTTTTTCTCCTGCTT TERM 4160 4665080 - 4665094 + H 85 -11.4 -3.30124 | CTTGAAGCGACTGTC GTCGGG TTC CCCGAC TTGTAGCAACTGCCG TERM 4161 4665112 - 4665122 + H 70 -8.2 -3.45945 | GTAGCAACTGCCGTT CCCC GGA GGGG TTAGTTGTCAATAGA Ava_3748 4665452 - 4666804 + | DNA polymerase III subunit alpha TERM 4162 4666972 - 4666942 - f 81 -9.2 -3.70417 | opp_overlap 4666942 4666943 4666945, overlap 4666931 4666929 4666943 ATCATATTAGTTAAA CTACTACGTCAACA GTA TATTGACATAGTAA TTCTTGGGCTTCACA TERM 4163 4666971 - 4666943 - f 77 -10.5 -2.81768 | opp_overlap 4666942 4666943 4666945, overlap 4666931 4666929 4666942 TCATATTAGTTAAAC TACTACGTCAACA GTA TATTGACATAGTA ATTCTTGGGCTTCAC Ava_3749 4667091 - 4667636 + | hypothetical protein Ava_3750 4667984 - 4668424 + | hypothetical protein TERM 4164 4668661 - 4668673 + G 72 -6.3 -4.37527 | opp_overlap 4668660 4668661 AGAGGTTAAGAGAAG GTGTT AAG AACAC TTTTAGTAATTGTCA Ava_3751 4668661 - 4669002 + | hypothetical protein Ava_3752 4672077 - 4669141 - | HAD family hydrolase TERM 4165 4671070 - 4671054 - G 75 -3 -5.09762 | overlap 4671056 AGGGCAAGATAAAAA TCTCTG TATCC CAGAAA ATATGTCCACGATAA Ava_3753 4674518 - 4672101 - | sucrose synthase, glycosyl transferase, group 1 TERM 4166 4674461 - 4674473 + g 73 -5.5 -4.73388 | AGGCAATGATCAACT GTTGC AGG GCAGC TTTTTCCTCACCATT Ava_3754 4675223 - 4675675 + | hypothetical protein tgt 4675839 - 4677002 + | queuine tRNA-ribosyltransferase TERM 4167 4677042 - 4677066 + T 84 -9.9 -3.77831 | opp_overlap 4677031 4677043, overlap 4677043 GAAACCCCTCTCCAA ACCTCTCCCCG AAG CGGAGAGAGGC TTTGAATCTTGCTCC TERM 4168 4677065 - 4677043 - T 100 -15.6 -3.5394 | opp_overlap 4677042 4677043, overlap 4677031 AAACCCCTCTCCAAA CCTCTCCCCG AAG CGGAGAGAGG CTTTGAATCTTGCTC TERM 4169 4677043 - 4677065 + T 90 -13.4 -2.86217 | opp_overlap 4677043 4677031, overlap 4677042 AAACCCCTCTCCAAA CCTCTCCCCG AAG CGGAGAGAGG CTTTGAATCTTGCTC Ava_3756 4678306 - 4677179 - | hypothetical protein TERM 4170 4678566 - 4678580 + H 71 -7.2 -3.97659 | GTTTTAATGATGGCT GTTAAC TGT GTTAAC TTTCCTTGCATTCTT Ava_3757 4678897 - 4679775 + | hypothetical protein TERM 4171 4679841 - 4679891 + T 87 -12 -3.2794 | opp_overlap 4679837 4679844, overlap 4679844 TTTGAAAAAATCGTA TAACTATTGAAGCGGAAGCGGCTG ATT CAATCAGATCCGCTTCAATAGTTA TTAATGTGACTGCCA TERM 4172 4679844 - 4679888 + T 81 -9.3 -3.78034 | opp_overlap 4679844 4679837, overlap 4679841 GAAAAAATCGTATAA CTATTGAAGCGGAAGCGGCTG ATT CAATCAGATCCGCTTCAATAG TTATTAATGTGACTG TERM 4173 4679888 - 4679844 - T 85 -11.5 -3.4616 | opp_overlap 4679841 4679844, overlap 4679837 GAAAAAATCGTATAA CTATTGAAGCGGAAGCGGCTG ATT CAATCAGATCCGCTTCAATAG TTATTAATGTGACTG Ava_3758 4680106 - 4679939 - | hypothetical protein TERM 4174 4680280 - 4680330 + H 100 -16.2 -4.10657 | opp_overlap 4680294 4680306 4680307 4680312, overlap 4680281 4680294 GTTGATCCCCCCTAA CCCCCCTTAAAAAGGGGGGAAATG AAT CAAAATCCCCCTTTTTAAGGGGGA TTTTGGGGGATCTAA TERM 4175 4680281 - 4680329 + H 100 -19.7 -3.06073 | opp_overlap 4680294 4680306 4680307 4680312, overlap 4680280 4680294 TTGATCCCCCCTAAC CCCCCTTAAAAAGGGGGGAAATG AAT CAAAATCCCCCTTTTTAAGGGGG ATTTTGGGGGATCTA TERM 4176 4680336 - 4680306 - H 100 -15.6 -3.51976 | opp_overlap 4680294 4680281 4680280 4680331, overlap 4680294 4680307 4680312 AAGGGGGGAAATGAA TCAAAATCCCCCTT TTT AAGGGGGATTTTGG GGGATCTAAAATGTT TERM 4177 4680335 - 4680307 - H 100 -19.1 -2.70704 | opp_overlap 4680294 4680281 4680280 4680331, overlap 4680294 4680306 4680312 AGGGGGGAAATGAAT CAAAATCCCCCTT TTT AAGGGGGATTTTG GGGGATCTAAAATGT TERM 4178 4680330 - 4680312 - H 100 -13.2 -4.5287 | opp_overlap 4680294 4680281 4680280, overlap 4680294 4680307 4680306 GGAAATGAATCAAAA TCCCCCTT TTT AAGGGGGA TTTTGGGGGATCTAA TERM 4179 4682150 - 4682133 - g 72 -7.7 -3.8901 | gap 1, overlap 4682108 4682136 GCGGAAATCACCAAA GTACCCGG CAT CCGGG-AC GCGTACACAGTAACA TERM 4180 4682148 - 4682136 - g 76 -10.5 -3.01022 | overlap 4682108 4682133 GAAATCACCAAAGTA CCCGG CAT CCGGG ACGCGTACACAGTAA Ava_3759 4680591 - 4682171 + | D-3-phosphoglycerate dehydrogenase TERM 4181 4682181 - 4682233 + F 95 -12.9 -3.52113 | opp_overlap 4682182 4682183 4682185 4682188, overlap 4682182 CTATAGGAGTCAGTA ATCAGAACTCAGAAGTCAGCAGAAA TAG TTTCTCCTGACTCCTGAATTCTGGA TTCTCAATTTTCAAC TERM 4182 4682182 - 4682232 + F 100 -16.4 -2.70786 | opp_overlap 4682182 4682183 4682185 4682188, overlap 4682181 TATAGGAGTCAGTAA TCAGAACTCAGAAGTCAGCAGAAA TAG TTTCTCCTGACTCCTGAATTCTGG ATTCTCAATTTTCAA TERM 4183 4682232 - 4682182 - f 100 -18.6 -3.1994 | opp_overlap 4682182 4682181, overlap 4682183 4682185 4682188 TATAGGAGTCAGTAA TCAGAACTCAGAAGTCAGCAGAAA TAG TTTCTCCTGACTCCTGAATTCTGG ATTCTCAATTTTCAA TERM 4184 4682231 - 4682183 - f 100 -22.1 -2.51642 | opp_overlap 4682182 4682181, overlap 4682182 4682185 4682188 ATAGGAGTCAGTAAT CAGAACTCAGAAGTCAGCAGAAA TAG TTTCTCCTGACTCCTGAATTCTG GATTCTCAATTTTCA TERM 4185 4682229 - 4682185 - f 100 -18.9 -2.79276 | opp_overlap 4682182 4682181, overlap 4682183 4682182 4682188 AGGAGTCAGTAATCA GAACTCAGAAGTCAGCAGAAA TAG TTTCTCCTGACTCCTGAATTC TGGATTCTCAATTTT TERM 4186 4682226 - 4682188 - f 100 -14.8 -3.54297 | opp_overlap 4682182 4682181, overlap 4682185 4682183 4682182 AGTCAGTAATCAGAA CTCAGAAGTCAGCAGAAA TAG TTTCTCCTGACTCCTGAA TTCTGGATTCTCAAT prmA 4682250 - 4683170 + | ribosomal protein L11 methyltransferase Ava_3761 4683385 - 4683711 + | hypothetical protein Ava_3762 4683711 - 4684052 + | hypothetical protein TERM 4187 4684142 - 4684108 - T 72 -8.1 -3.62255 | gap 1, opp_overlap 4684105 4684111 4684111 4684114, overlap 4684085 4684104 4684101 4684110 4684111 CCTAATAATAATTAA TATGT-AGAGATGCAA ATAT TTGCATCTCTAACTTA ATATTTACTAAACAA TERM 4188 4684138 - 4684110 - T 70 -8.4 -3.37882 | gap 1, opp_overlap 4684105 4684111 4684111 4684114, overlap 4684085 4684108 4684104 4684101 4684111 TAATAATAATTAATA TGTAGAGATGCAA ATAT TTGCATCTCTA-A CTTAATATTTACTAA TERM 4189 4684111 - 4684139 + T 80 -9.8 -3.48269 | gap 1, opp_overlap 4684085 4684110 4684108 4684104 4684101 4684111, overlap 4684111 4684105 4684114 AATAATAATTAATAT GT-AGAGATGCAA ATAT TTGCATCTCTAAC TTAATATTTACTAAA TERM 4190 4684111 - 4684138 + T 74 -10 -2.68479 | opp_overlap 4684085 4684110 4684108 4684104 4684101 4684111, overlap 4684105 4684111 4684114 AATAATAATTAATAT GTAGAGATGCAA ATAT TTGCATCTCTAA CTTAATATTTACTAA TERM 4191 4684138 - 4684111 - T 74 -10 -2.61645 | opp_overlap 4684111 4684111 4684105 4684114, overlap 4684085 4684110 4684108 4684104 4684101 AATAATAATTAATAT GTAGAGATGCAA ATAT TTGCATCTCTAA CTTAATATTTACTAA TERM 4192 4684114 - 4684135 + T 81 -11.7 -2.6197 | opp_overlap 4684085 4684110 4684111 4684108 4684104 4684101, overlap 4684111 4684111 4684105 AATAATTAATATGTA GAGATGCAA ATAT TTGCATCTC TAACTTAATATTTAC Ava_3763 4684467 - 4684150 - | thioredoxin fabG 4684840 - 4685595 + | 3-ketoacyl-(acyl-carrier-protein) reductase Ava_3765 4686777 - 4685695 - | glycosyl transferase family protein TERM 4193 4687036 - 4687022 - g 76 -10 -3.23975 | overlap 4687020 ATGCTGTAAAAATTA CCTTGG GTC CCAAGG GTCGCAACGTGCTTT groEL 4686937 - 4688619 + | chaperonin GroEL TERM 4194 4688779 - 4688722 - T 100 -17 -2.87239 | opp_overlap 4688722 AATAGCCAAACATTA GGGGCAACTTCACTGCGATCGCCTGC TGTTGT GCAGGTAAACCCAGGGAAGCTGCCCC TTTAAGTTACAAAGA TERM 4195 4688722 - 4688779 + T 100 -14.8 -3.75153 | opp_overlap 4688722 AATAGCCAAACATTA GGGGCAACTTCACTGCGATCGCCTGC TGTTGT GCAGGTAAACCCAGGGAAGCTGCCCC TTTAAGTTACAAAGA TERM 4196 4688834 - 4688810 - T 75 -9.5 -3.22521 | opp_overlap 4688809 4688815, overlap 4688805 4688815 TTTACACTAATTGAA CAAAATTCAAA AAT CTTGAATTTTG CATTGGTATTACTCA Ava_3767 4689559 - 4688843 - | Heme oxygenase TERM 4197 4689122 - 4689140 + g 81 -7.4 -4.6526 | opp_overlap 4689121 4689120 4689124 CCCGTCATTCAAATT CATCGCTG TCA CAGCAATG TTTTTGAGAATTTGT Ava_3768 4689876 - 4689718 - | hypothetical protein Ava_3769 4690375 - 4691847 + | phosphoglucosamine mutase TERM 4198 4692735 - 4692725 - g 79 -6.8 -4.63527 | opp_overlap 4692732 4692734 GCATTACGTGAAAAA GGTG TTG CACC AGGGGCGGGTATTTT Ava_3770 4692020 - 4693066 + | RNA 3'-terminal-phosphate cyclase TERM 4199 4695449 - 4695435 - g 91 -8.6 -4.73094 | AACATCAAGATAAAA TCAGCA TGG TGCTGA TGGATATAATGATGC Ava_3771 4693523 - 4695667 + | multi-sensor hybrid histidine kinase Ava_3772 4695861 - 4696775 + | cobyrinic acid a,c-diamide synthase TERM 4200 4696938 - 4696921 - T 89 -11.3 -3.9461 | opp_overlap 4696923 TTGGGTGAAGAAGAA GACGCGA TGAA TCGCGTC TCTACAAATGCTTTA Ava_3773 4697603 - 4696998 - | hypothetical protein TERM 4201 4697663 - 4697634 - R 93 -12.3 -4.0492 | opp_overlap 4697634 4697635, overlap 4697635 CAATTCCTACATAAA CGTAGAGACGTTT AATC AAACGTCCCTACA TTCATGTTAAACCTG TERM 4202 4697635 - 4697662 + r 81 -11.4 -2.61728 | opp_overlap 4697634 4697635, overlap 4697634 AATTCCTACATAAAC GTAGAGACGTTT AATC AAACGTCCCTAC ATTCATGTTAAACCT TERM 4203 4697662 - 4697635 - R 100 -13.6 -3.0247 | opp_overlap 4697635 4697634, overlap 4697634 AATTCCTACATAAAC GTAGAGACGTTT AATC AAACGTCCCTAC ATTCATGTTAAACCT ileS 4700617 - 4697681 - | isoleucyl-tRNA synthetase TERM 4204 4702348 - 4702362 + G 88 -10 -4.15044 | GTACGTGCTAAGGTC GTCGGT TCT ACCGAC TTTCTTACAAAACCA Ava_3775 4701292 - 4702476 + | response regulator receiver domain-containing protein Ava_3776 4702753 - 4703115 + | response regulator receiver domain-containing protein Ava_3777 4703164 - 4703637 + | CheW protein TERM 4205 4704495 - 4704469 - g 73 -2.5 -5.10497 | opp_overlap 4704469 AAGTGATGGAAAAAA TCTTA-CGGCTAT CAA ATA-CCGATAAGA TTTTCCAAAGCACCA TERM 4206 4705524 - 4705506 - g 77 -4.6 -5.0065 | CAGGTACAAATAAAA TCTGAG AAAATAG CTCAGA TAGCAGAACAGGAAA TERM 4207 4706589 - 4706575 - g 74 -4.2 -5.01732 | AATCTTCGCAAAAAA TCTCCA AAG TGGTGA ACTTGATTAGTAGTT Ava_3778 4703790 - 4707092 + | chemotaxis sensory transducer, phytochrome sensor TERM 4208 4707312 - 4707290 - f 75 -9.8 -2.86217 | overlap 4707289 GAGTAAGATTCAAAG CCTCTCTCCG CTT CGGGGAAAGG TACCCTACGGAAAGC TERM 4209 4710169 - 4710189 + G 93 -12.7 -3.07043 | overlap 4710171 ACTATGCTTAGTCTG CATCAACTC TCA GAGTTGATG TATTACAATGGTGGC TERM 4210 4710171 - 4710187 + G 72 -9.5 -3.09289 | overlap 4710169 TATGCTTAGTCTGCA TCAACTC TCA GAGTTGA TGTATTACAATGGTG Ava_3779 4707454 - 4710996 + | CheA Signal transduction histidine Kinases (STHK) Ava_3780 4711472 - 4711035 - | protein tyrosine phosphatase Ava_3781 4712496 - 4711612 - | Pirin-like TERM 4211 4713038 - 4713048 + G 71 -3.2 -5.03314 | AAGGAGAACAGTACA GGTC TGT GATC TTTTTTCACAATGAG Ava_3782 4712719 - 4713216 + | methionine sulfoxide reductase A TERM 4212 4713403 - 4713370 - f 70 -5.4 -4.43272 | gap 2, opp_overlap 4713370 4713377, overlap 4713377 4713378 ATTCAAAATTCAAAA TTAAAGACCCCACGGA TTTA TCCG-GGGG-CTTGAA TTAATGTTGTTTCAC TERM 4213 4713397 - 4713377 - f 78 -9 -3.70102 | gap 1, opp_overlap 4713377 4713370, overlap 4713370 4713378 ATTCAAAATTAAAGA CCCCACGGA TTTA TCCG-GGGG CTTGAATTAATGTTG TERM 4214 4713397 - 4713378 - f 73 -9.2 -2.80977 | opp_overlap 4713377 4713370, overlap 4713377 4713370 TTCAAAATTAAAGAC CCCACGGA TTTA TCCGGGGG CTTGAATTAATGTTG TERM 4215 4713493 - 4713442 - f 95 -11.6 -4.55295 | gap 1, opp_overlap 4713453, overlap 4713446 4713457 TTCGCCATAAATAAA TTTAGCGCGAAG-TCAGAGCGCCGG TCT CCGGCGCTCTGAACTTCGTAAGAGA GGGGCTTGTATCCTT TERM 4216 4713489 - 4713446 - f 100 -16.8 -2.82776 | gap 1, opp_overlap 4713453, overlap 4713442 4713457 CCATAAATAAATTTA GCGCGAAG-TCAGAGCGCCGG TCT CCGGCGCTCTGAACTTCGTAA GAGAGGGGCTTGTAT TERM 4217 4713453 - 4713482 + F 100 -18.7 -3.14132 | gap 1, opp_overlap 4713446 4713442 4713457 TAAATTTAGCGCGAA G-TCAGAGCGCCGG TCT CCGGCGCTCTGAAC TTCGTAAGAGAGGGG TERM 4218 4713477 - 4713457 - f 100 -18.3 -2.53263 | opp_overlap 4713453, overlap 4713446 4713442 TTTAGCGCGAAGTCA GAGCGCCGG TCT CCGGCGCTC TGAACTTCGTAAGAG Ava_3783 4713702 - 4715948 + | oxidoreductase alpha (molybdopterin) subunit Ava_3784 4716879 - 4719065 + | DNA topoisomerase I TERM 4219 4719099 - 4719068 - f 81 -8.2 -4.30977 | gap 1, opp_overlap 4719068 4719070, overlap 4719064 AATAAATAAATGAAA GACTATCCCT-CTCA ACG TAAATAGGGATAGTC TAGTTTTACCAATCG Ava_3785 4719128 - 4719964 + | hypothetical protein Ava_3786 4719966 - 4720520 + | hypothetical protein TERM 4220 4720551 - 4720565 + T 72 -3.6 -4.93547 | opp_overlap 4720551 AGTCCTGGTCAATTA TCATTA CTA TGATGA TTTTTGATTGCTTGA Ava_3787 4721150 - 4720557 - | hypothetical protein Ava_3788 4722247 - 4721456 - | hypothetical protein TERM 4221 4721812 - 4721785 - G 71 -9.9 -2.58861 | opp_overlap 4721788, overlap 4721784 TATCACCCTTATAAC CCCGGAAAACT TCCTTG AGTGTTCCGGG ACTACCAATTCCCGC Ava_3789 4723998 - 4722430 - | transposase IS4 TERM 4222 4722953 - 4722966 + g 74 -6.7 -4.3129 | opp_overlap 4722953 GTTGCTTGCCAACTA GTTCC GGGG GGAAC TTTTCCTACTAAATC dnaG 4726202 - 4724280 - | DNA primase TERM 4223 4724954 - 4724942 - G 72 -6.3 -4.29106 | CTGCACAGTAAGAAA CGTAA TAG TTACG GGTATCGCTATTAAC TERM 4224 4726029 - 4726061 + g 70 -3.5 -4.77036 | overlap 4726032 AAAGCAATAATACAT TTGCTTAGTTTGGCT GAC AGTAAAACTAGGTGA TTTTTCATCATGGAA TERM 4225 4727034 - 4727003 - g 70 -9.6 -2.74563 | opp_overlap 4727003 CGCAGACCCGAATTA TCCACCCATCAATA TTAA TATTAATGGGCAGA ATTATGCAGAGCAAG Ava_3791 4726407 - 4727759 + | cell wall hydrolase/autolysin Ava_3792 4728910 - 4727792 - | SMF protein Ava_3793 4729682 - 4729014 - | hypothetical protein Ava_3794 4730547 - 4729747 - | hypothetical protein Ava_3795 4730659 - 4730814 + | hypothetical protein TERM 4226 4730853 - 4730866 + F 100 -9.5 -5.4505 | TTTTGTTGTGTTCAT CCCGC TCAG GCGGG TTTTTTGTTGGAAAC Ava_3796 4731561 - 4732016 + | hypothetical protein TERM 4227 4732148 - 4732170 + F 100 -12.1 -4.57837 | opp_overlap 4732138 TCTAAGTTTTTATCA TCCCCATTG TCTGT CAATGGGGA TTTTTAACACAATAT TERM 4228 4732454 - 4732427 - g 72 -7.8 -3.767 | opp_overlap 4732434 4732435, overlap 4732448 TATCCATGCAGGAAA TGAACTATGGTT GTGG AACCACCGTTCA TCCTACGGAACTTGG TERM 4229 4733200 - 4733180 - g 72 -6.1 -4.4009 | overlap 4733182 CCGTATGCGATAAAA CTGCTGCTA AAC TAGCAACGG TAAAGCCAAAAGAAG Ava_3797 4732213 - 4733265 + | hypothetical protein TERM 4230 4733364 - 4733399 + G 76 -11.2 -2.52946 | overlap 4733354 4733357 4733363 4733362 TAAGGGTGTAGCGAC GCTGTTTGGTAGTCGG ACAA CAAGCTACCAAACAGC AATTTTGTGGGCAAC Ava_3798 4733281 - 4734240 + | phosphate transporter TERM 4231 4735013 - 4735003 - g 75 -3.2 -5.1925 | TTAGAACGGAAAAAA CTAG AGA CCAG TTATTTGCACTTTTT Ava_3799 4734283 - 4735290 + | radical SAM family protein Ava_3800 4735420 - 4735803 + | transposase Ava_3801 4735845 - 4736213 + | transposase IS4 TERM 4232 4736510 - 4736475 - f 100 -12 -4.49556 | opp_overlap 4736486, overlap 4736478 GCTGCACCAAATAAA TGATGTAGAGACGTTG TATG CAACGTCTCTACAGTA AAGAATAAAGTGCAT TERM 4233 4736507 - 4736478 - f 100 -18.1 -3.20639 | opp_overlap 4736486, overlap 4736475 GCACCAAATAAATGA TGTAGAGACGTTG TATG CAACGTCTCTACA GTAAAGAATAAAGTG TERM 4234 4736708 - 4736684 - f 100 -12.2 -4.38171 | opp_overlap 4736684 CACACCACACGAAAA GCCGCAAAAC AAATA GTTTCGCGGC TTTTTCTATAGTTGT TERM 4235 4736684 - 4736708 + F 100 -10 -5.05079 | opp_overlap 4736684 CACACCACACGAAAA GCCGCAAAAC AAATA GTTTCGCGGC TTTTTCTATAGTTGT TERM 4236 4736787 - 4736827 + F 72 -8.4 -3.49475 | opp_overlap 4736796, overlap 4736788 4736796 TTTTTTATGTAGGGG AGGCAA-AAAGCGGTGTGGA TTT TCCTC-CCGCTTTATTGCCG TTGTGTGACGCTGCG TERM 4237 4736788 - 4736826 + F 83 -11.9 -2.69471 | opp_overlap 4736796, overlap 4736787 4736796 TTTTTATGTAGGGGA GGCAA-AAAGCGGTGTGGA TTT TCCTC-CCGCTTTATTGCC GTTGTGTGACGCTGC TERM 4238 4736817 - 4736796 - f 78 -6.5 -4.66609 | gap 1, opp_overlap 4736788 4736787 4736796 TAGGGGAGGCAAAAA GCGGTGTGGA TTT TCCTC-CCGC TTTATTGCCGTTGTG TERM 4239 4736796 - 4736817 + F 73 -6.5 -4.21989 | gap 1, opp_overlap 4736796, overlap 4736788 4736787 TAGGGGAGGCAAAAA GCGGTGTGGA TTT TCCTC-CCGC TTTATTGCCGTTGTG Ava_3802 4737055 - 4737267 + | hypothetical protein Ava_3803 4737473 - 4738717 + | GCN5-related N-acetyltransferase Ava_3804 4738796 - 4739251 + | Holliday junction resolvase-like protein Ava_3805 4739392 - 4739970 + | hypothetical protein TERM 4240 4740208 - 4740220 + F 72 -7.7 -3.76815 | overlap 4740201 TTTGTAGGTGTAGTA TTGCC TTG GGCAA TTTCACATTTTAAGT TERM 4241 4740258 - 4740268 + G 73 -5.4 -4.58663 | AAGGATAGAGTATGA CTTG GCA CAAG TTTTTACAGCCTGAT Ava_3806 4740254 - 4740793 + | HAD family hydrolase TERM 4242 4740929 - 4740970 + F 88 -12.5 -3.10975 | gap 1, opp_overlap 4740929 4740926, overlap 4740934 AGTAACTATAAATCA GTAAAGCGTCAG-CCTTC ACTTATA GAGGGACTGGCGCTTTAC TATTGAGTAGTGAGT Ava_3807 4741088 - 4742197 + | gamma-glutamyl kinase TERM 4243 4742267 - 4742250 - T 95 -6.9 -5.28983 | opp_overlap 4742250 CTTAAAAGAGAAAAA CCCCGAT ACCT AACGGGG TTAATGTTACTTTAG TERM 4244 4742352 - 4742337 - T 76 -6.8 -4.37991 | opp_overlap 4742337, overlap 4742331 GAAAAATAGGTAAAA GGTAGG AGAA CCCACC TTTGTACAGAGCTTA Ava_3808 4742934 - 4742467 - | hypothetical protein Ava_3809 4743381 - 4743572 + | hypothetical protein Ava_3810 4744465 - 4743641 - | hypothetical protein TERM 4245 4744659 - 4744683 + r 95 -14.3 -2.72829 | opp_overlap 4744651, overlap 4744659 AACCTAACCCCCCAG CCCCCTTCCCT GCG AGGGAATGGGG GTTTCAAAGCCTCTC TERM 4246 4744659 - 4744684 + r 100 -14.1 -3.5525 | gap 1, opp_overlap 4744651, overlap 4744659 AACCTAACCCCCCAG CCCCC-TTCCCT GCG AGGGAATGGGGG TTTCAAAGCCTCTCT TERM 4247 4744716 - 4744692 - R 80 -9.9 -3.53343 | opp_overlap 4744693 4744693, overlap 4744693 AATGGGGGTTTCAAA GCCTCTCTCCG TTT CGGGGAGAGGT TTGGAGAGGGGTTTC TERM 4248 4744693 - 4744715 + r 100 -15.6 -3.5394 | opp_overlap 4744692 4744693, overlap 4744693 ATGGGGGTTTCAAAG CCTCTCTCCG TTT CGGGGAGAGG TTTGGAGAGGGGTTT TERM 4249 4744715 - 4744693 - R 88 -13.4 -2.71791 | opp_overlap 4744693 4744693, overlap 4744692 ATGGGGGTTTCAAAG CCTCTCTCCG TTT CGGGGAGAGG TTTGGAGAGGGGTTT Ava_3811 4746011 - 4744779 - | bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase Ava_3812 4746344 - 4746132 - | hypothetical protein TERM 4250 4746293 - 4746313 + g 70 -2.5 -5.04249 | overlap 4746294 CCAGTTCCTCCACCT CTGCTGC GGTCATG GCAGCAA TTTCTTTTTTGGAAA TERM 4251 4746382 - 4746421 + r 71 -8.6 -3.18912 | overlap 4746384 4746386 AGCATTTGCACCCAG CACGGGTTGAGTGGCGCT ATAA AGTGCCACTCAATCTATC TTACTCACTAGATGG TERM 4252 4746384 - 4746419 + r 80 -11.2 -3.15699 | overlap 4746382 4746386 CATTTGCACCCAGCA CGGGTTGAGTGGCGCT ATAA AGTGCCACTCAATCTA TCTTACTCACTAGAT TERM 4253 4746386 - 4746417 + r 100 -16 -3.13867 | overlap 4746384 4746382 TTTGCACCCAGCACG GGTTGAGTGGCGCT ATAA AGTGCCACTCAATC TATCTTACTCACTAG Ava_3813 4747191 - 4746499 - | phospholipase/carboxylesterase Ava_3814 4748136 - 4747351 - | hypothetical protein TERM 4254 4748201 - 4748215 + r 77 -10 -3.1247 | opp_overlap 4748196 AACTATTTAACGTGA GCCTTC AAG GAAGGC TTACCTGTGAGAAGT Ava_3815 4749462 - 4748368 - | hypothetical protein Ava_3816 4749984 - 4749577 - | hypothetical protein Ava_3817 4750320 - 4749994 - | hypothetical protein TERM 4255 4751477 - 4751465 - g 71 -2 -5.11033 | overlap 4751456 CAGAAGCGCAAAAAA TTCT GGCGA AGAA ATCTAATGTGCGGGT purH 4750459 - 4751979 + | bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase TERM 4256 4752272 - 4752311 + T 73 -5.6 -4.56367 | opp_overlap 4752271 4752285, overlap 4752285 ATGATTGCAACACAT CCTTGGGTGAAGACGCGA TTCA TCGCGTCTCTACAGATGG TTTATTTGTCGGATG Ava_3819 4756206 - 4752313 - | PAS/PAC sensor hybrid histidine kinase TERM 4257 4753859 - 4753834 - G 74 -6.9 -4.27316 | gap 1, opp_overlap 4753839 4753848 CTGGGTAATCCAAAA CATTTGCGG-CA TGG TGTCCGCTAATG TGCGGAACATCAATT TERM 4258 4755588 - 4755600 + g 71 -9.1 -3.31461 | opp_overlap 4755586 TTACCCAAAGTGACG CGCCA TCG TGGCG TTGTAAACGTAAATC TERM 4259 4756689 - 4756641 - R 75 -5.4 -4.7629 | gap 1, opp_overlap 4756647, overlap 4756647 GGAGCAAGTTAAAAA TAGAAAGCGCCTGGG-GTG GAAACACGGCAA CACTCCCAGGCGCTTTTTT ATGGTGCTGTGCGTA TERM 4260 4756683 - 4756647 - R 90 -8.8 -4.56791 | gap 1, opp_overlap 4756647, overlap 4756641 AGTTAAAAATAGAAA GCGCCTGGG-GTG GAAACACGGCAA CACTCCCAGGCGC TTTTTTATGGTGCTG TERM 4261 4756647 - 4756683 + r 100 -8.8 -5.32882 | gap 1, opp_overlap 4756641 4756647 AGTTAAAAATAGAAA GCGCCTGGG-GTG GAAACACGGCAA CACTCCCAGGCGC TTTTTTATGGTGCTG TERM 4262 4756889 - 4756853 - R 100 -8.8 -5.63236 | gap 1, opp_overlap 4756853 AGTTAAAAATAAAAA GCGCCTGGG-GTG GAAACACGGCAA CACTCCCAGGCGC TTTTTAATTGAGGCT TERM 4263 4756853 - 4756889 + r 100 -8.8 -4.86621 | gap 1, opp_overlap 4756853 AGTTAAAAATAAAAA GCGCCTGGG-GTG GAAACACGGCAA CACTCCCAGGCGC TTTTTAATTGAGGCT TERM 4264 4757057 - 4757009 - R 83 -7 -4.7629 | gap 1, opp_overlap 4757015 GGAGCAAGTTAAAAA TAAAAAGCATCTGGG-GTG GAAACACGGCAA CACTCCCAGGTGCTTTTTA GTTATTGGCAAATTG TERM 4265 4757015 - 4757051 + r 72 -3.8 -4.99435 | gap 1, opp_overlap 4757009 AGTTAAAAATAAAAA GCATCTGGG-GTG GAAACACGGCAA CACTCCCAGGTGC TTTTTAGTTATTGGC Ava_3820 4757801 - 4757073 - | hypothetical protein Ava_3821 4758732 - 4758040 - | manganese containing catalase Ava_3822 4759175 - 4758903 - | transglycosylase-associated protein TERM 4266 4759419 - 4759438 + H 74 -8 -3.98716 | AACAGAAATATTGGC TATCTTTC TAGA GAAAGATA TTTAATTACTAGTTT Ava_3823 4759735 - 4760475 + | cytochrome c biogenesis protein, transmembrane region TERM 4267 4760894 - 4760914 + G 80 -10.5 -3.45366 | overlap 4760899 AACTCGCTTTAAGTG CAGAACTAG ACG CTGGTTCTG TTAATTCCTTAAGCC Ava_3824 4760479 - 4761864 + | ResB-like Ava_3825 4762280 - 4761945 - | XisI protein-like Ava_3826 4762684 - 4762268 - | fdxN element excision controlling factor protein TERM 4268 4763736 - 4763725 - g 71 -2.2 -5.24531 | ATCCCTGACAAAAAA GCCT TCAA AGAC CAGTATCGTCAGGCA Ava_3827 4763227 - 4763940 + | Heme oxygenase Ava_3828 4764292 - 4765674 + | coproporphyrinogen III oxidase Ava_3829 4766774 - 4765866 - | hypothetical protein Ava_3830 4767242 - 4767030 - | hypothetical protein Ava_3831 4767428 - 4767664 + | hypothetical protein Ava_3832 4768641 - 4767727 - | succinoglycan biosynthesis ketolase TERM 4269 4768832 - 4768800 - R 81 -9.2 -3.76413 | overlap 4768793 TGTCAAAAGTCTAAA GTCCACAGTCTAAG CTAGC CTTTGACTCTGGAC AGCCCTGACGCAAGA Ava_3833 4770282 - 4769014 - | polynucleotide adenylyltransferase region TERM 4270 4769303 - 4769292 - G 70 -5.8 -4.37711 | overlap 4769285 GTACTAAAGCTAAAA CAGC GATC GCTG CAAATACCATACCTG Ava_3834 4770368 - 4770616 + | hypothetical protein TERM 4271 4770708 - 4770676 - f 73 -6.4 -4.30809 | gap 2, overlap 4770666 4770664 4770679 4770684 CAATACCCACCAAAA TCATGATACGGTGGGC ATT GCCCACCCTA-CA-GA GACTCAGATTTGTTC TERM 4272 4770706 - 4770679 - f 75 -9.2 -3.14218 | gap 1, overlap 4770666 4770664 4770676 4770684 TACCCACCAAAATCA TGATACGGTGGGC ATT GCCCACCCTA-CA GAGACTCAGATTTGT TERM 4273 4770702 - 4770684 - f 75 -10.2 -2.9244 | overlap 4770666 4770664 4770679 4770676 ACCAAAATCATGATA CGGTGGGC ATT GCCCACCC TACAGAGACTCAGAT Ava_3835 4770768 - 4771424 + | peptidase M22, glycoprotease surE 4771528 - 4772208 + | stationary phase survival protein SurE TERM 4274 4772479 - 4772503 + F 100 -8.6 -6.07969 | opp_overlap 4772483, overlap 4772480 CCATAACTCTTTTAC CCAAGCGTCA GTACA TGACGCTTGC TTTTTTTTGATTTTA TERM 4275 4772480 - 4772502 + F 93 -12.1 -4.21121 | opp_overlap 4772483, overlap 4772479 CATAACTCTTTTACC CAAGCGTCA GTACA TGACGCTTG CTTTTTTTTGATTTT TERM 4276 4773961 - 4773976 + G 75 -3.2 -5.08824 | TTTTGTATTTACCTT CTGTGG AACA CAACAG TTTTTTCAATCACCA TERM 4277 4774544 - 4774528 - g 91 -8.1 -4.89233 | CACTAAGACTAAAAA TTTGCAA AAT TTGCAAA TACGCATTGTTGCGT Ava_3837 4773410 - 4774777 + | hypothetical protein Ava_3838 4778060 - 4774887 - | hydrophobe/amphiphile efflux-1 HAE1 TERM 4278 4775030 - 4775012 - G 70 -7.4 -3.75817 | opp_overlap 4775010, overlap 4775010 4775014 TGGGGACAACAAATA GACTCAAC ACA GTTGAGAC AATCATTCCCCCTGC TERM 4279 4775028 - 4775014 - G 71 -8.6 -3.45784 | opp_overlap 4775010, overlap 4775012 4775010 GGGACAACAAATAGA CTCAAC ACA GTTGAG ACAATCATTCCCCCT TERM 4280 4776236 - 4776225 - G 70 -5.8 -4.24384 | ACCACTAAAACTAAA GCCA CCAA TGGC AAAGGTTCCTGTAAC TERM 4281 4776476 - 4776440 - G 70 -7.4 -3.90645 | gap 1, overlap 4776432 4776461 4776464 4776466 4776467 GGAATAATAAGACAA CGATCGCCCTAACCTTC ACAA GAATATT-GAGCGATCG CTCATATCCCCGGCG TERM 4282 4776560 - 4776544 - G 70 -9.3 -2.84098 | overlap 4776541 TTGCCTAACCAACCA CGGGGGC GCT GTCCCCG ACGTAATAATAAGGC Ava_3839 4779527 - 4778208 - | secretion protein HlyD TERM 4283 4779435 - 4779476 + g 74 -10.1 -3.14463 | opp_overlap 4779438 GATGGCAGCCAACAA TAACCTGAGCCACCGCC TTTGTTTT GGTGGTGGCTCAGGGGG TTCCTGGGGAAGATT TERM 4284 4779473 - 4779438 - G 100 -16.2 -3.97307 | opp_overlap 4779435 GGCAGCCAACAATAA CCTGAGCCACCGCC TTTGTTTT GGTGGTGGCTCAGG GGGTTCCTGGGGAAG Ava_3840 4780622 - 4780263 - | hypothetical protein TERM 4285 4783517 - 4783502 - g 70 -3.9 -4.79949 | overlap 4783503 TCTGCAAAAAAACAA CGCCG CAAAAT CGGCA TCTGTGGGCAGGCAC Ava_3841 4781195 - 4783654 + | phosphoenolpyruvate synthase Ava_3842 4784076 - 4783750 - | hypothetical protein TERM 4286 4784150 - 4784123 - R 73 -9.2 -2.87146 | overlap 4784122 TTTGCTCAGAATAAT TGAGCGCCCT TGGTTAAG AGAGCGCTCA CCGCGATAATCAATT Ava_3843 4785148 - 4784189 - | steroid delta-isomerase TERM 4287 4785450 - 4785392 - H 95 -13.3 -3.35597 | gap 2, opp_overlap 4785408, overlap 4785394 4785395 TTGATTTTTGAAATA TACGTAGGGTGGGCAATGCCCACCAAAAC CAT GAGCCGGTGGGCATTGTCCACCCTAC--A GGTACTACAGATACT TERM 4288 4785450 - 4785394 - H 100 -23.1 -3.24708 | opp_overlap 4785408, overlap 4785392 4785395 GATTTTTGAAATATA CGTAGGGTGGGCAATGCCCACCAAAAC CAT GAGCCGGTGGGCATTGTCCACCCTACA GGTACTACAGATACT TERM 4289 4785449 - 4785395 - H 100 -24.4 -2.54504 | opp_overlap 4785408, overlap 4785392 4785394 ATTTTTGAAATATAC GTAGGGTGGGCAATGCCCACCAAAAC CAT GAGCCGGTGGGCATTGTCCACCCTAC AGGTACTACAGATAC Ava_3844 4785400 - 4785525 + | hypothetical protein TERM 4290 4785910 - 4785935 + G 93 -9.1 -4.56597 | TACATGATTGCTGTG GGAATGTGGCT GAGT AGCTATATTCC TTTTTGGCAAGAGGG Ava_3845 4785715 - 4787178 + | glycosyl transferase family protein Ava_3846 4787845 - 4787237 - | K+ transporting ATPase, KdpC subunit TERM 4291 4787461 - 4787481 + g 70 -7.6 -3.62864 | TATAGACTAAATCGG CAGTTGGT TGGAT ACCAGCTG TTTGCAGTCGATTTA Ava_3847 4788057 - 4787845 - | potassium-dependent ATPase G chain TERM 4292 4788219 - 4788205 - R 93 -12.8 -3.30124 | CGGCAGTCGCTACAA CGGGGG AAA CCCCCG CAACGCGCTGCCTCC Ava_3848 4790378 - 4788252 - | potassium-transporting ATPase subunit B Ava_3849 4792141 - 4790402 - | potassium-transporting ATPase subunit A TERM 4293 4791926 - 4791908 - G 71 -4.6 -4.58297 | CAGCAAAAACACAAA CAATCCCA TCA TGAAATTG CTATACAAAATGGCT TERM 4294 4792395 - 4792348 - H 77 -10 -3.25896 | gap 1, opp_overlap 4792353 4792354 4792358, overlap 4792346 4792353 4792356 TGATTATTGAGAATA CCTAAG-TATCTGTAGGGTGGGC AAT GCCCACCCTACGTATATCTTATA AATCAAATATGAGTT TERM 4295 4792389 - 4792353 - H 87 -12.3 -3.21993 | opp_overlap 4792353 4792354 4792358, overlap 4792348 4792346 4792356 ATTGAGAATACCTAA GTATCTGTAGGGTGGGC AAT GCCCACCCTACGTATAT CTTATAAATCAAATA TERM 4296 4792353 - 4792390 + H 100 -14.3 -3.36505 | gap 1, opp_overlap 4792353 4792348 4792346 4792356, overlap 4792354 4792358 ATTGAGAATACCTAA G-TATCTGTAGGGTGGGC AAT GCCCACCCTACGTATATC TTATAAATCAAATAT TERM 4297 4792354 - 4792388 + H 100 -18 -3.25102 | opp_overlap 4792353 4792348 4792346 4792356, overlap 4792353 4792358 TTGAGAATACCTAAG TATCTGTAGGGTGGGC AAT GCCCACCCTACGTATA TCTTATAAATCAAAT TERM 4298 4792386 - 4792356 - H 100 -14 -2.79694 | opp_overlap 4792354 4792353 4792358, overlap 4792353 4792348 4792346 GAGAATACCTAAGTA TCTGTAGGGTGGGC AAT GCCCACCCTACGTA TATCTTATAAATCAA TERM 4299 4792358 - 4792384 + H 100 -18.8 -3.15459 | opp_overlap 4792356 4792353 4792348 4792346, overlap 4792354 4792353 GAATACCTAAGTATC TGTAGGGTGGGC AAT GCCCACCCTACG TATATCTTATAAATC Ava_3850 4792438 - 4793553 + | periplasmic sensor Signal transduction histidine kinase Ava_3851 4793543 - 4794226 + | two component LuxR family transcriptional regulator TERM 4300 4795225 - 4795213 - gf 74 -4.1 -5.06816 | ATCGCGGAAGAAAAA CTAGA CAG CCTAG AACCATACTTAGGAC TERM 4301 4795353 - 4795334 - gf 71 -9.4 -2.53263 | overlap 4795338 CTCAGGCTCAAGCTA TACAGATG ATAC CATCTGTA AATCCAGTGAGCGAT TERM 4302 4796474 - 4796461 - gf 86 -6.7 -5.02439 | opp_overlap 4796461 ACAGAAGTAGAAAAA GCCTT AGAT AAGGC TTTGGGTAATTTGCG Ava_3852 4794640 - 4796937 + | multi-sensor Signal transduction histidine kinase Ava_3853 4796891 - 4797337 + | response regulator receiver domain-containing protein TERM 4303 4798601 - 4798613 + G 72 -7.7 -3.88731 | TAATAGTGAGGTTGG GGTTG GTA CAACC TTTACTATCATCTTG Ava_3854 4797486 - 4798646 + | response regulator receiver Signal transduction histidine kinase TERM 4304 4798689 - 4798700 + T 71 -4.4 -4.85599 | TGGTAAAAAGTTGTT GTCT AGGG AGAC TTTTTATAAAATAAA Ava_3855 4801566 - 4798900 - | amino acid adenylation TERM 4305 4801620 - 4801596 - R 80 -2.2 -5.64873 | gap 1, opp_overlap 4801607, overlap 4801598 4801611 CTCAATAATAAAAAA TTTCTC-ACGC AGAG ACGCAGAGAAA ACACACTCCGCGTCC Ava_3856 4803099 - 4801723 - | hypothetical protein Ava_3857 4803953 - 4803114 - | O-methyltransferase family protein Ava_3858 4805360 - 4804128 - | 3-dehydroquinate synthase Ava_3859 4808495 - 4806570 - | Cd/Co/Hg/Pb/Zn-translocating P-type ATPase Ava_3860 4808605 - 4809717 + | ATPase-like Ava_3861 4809905 - 4810249 + | hypothetical protein Ava_3862 4810316 - 4811422 + | precorrin-8X methylmutase Ava_3863 4812511 - 4811468 - | hypothetical protein TERM 4306 4813100 - 4813083 - H 74 -2.7 -5.28778 | ACTAGCGACAAAAAA CCAATAT TTAT ATCTTGG GAAAACCACTGGCGA Ava_3864 4813219 - 4813596 + | hypothetical protein Ava_3865 4814864 - 4813602 - | periplasmic sensor Signal transduction histidine kinase TERM 4307 4814708 - 4814722 + g 91 -4.9 -5.626 | CTGACTTCACACTTG CCGCC ATTAC GGTGG TTTTTTTATACAGTA TERM 4308 4815361 - 4815325 - g 71 -4.6 -4.63089 | opp_overlap 4815336 4815337, overlap 4815337 GAGTTGAAAAAAGAA CTCGAATCCAAA-CACTG GAT CAGTGATTTAGAT-CGCG TCGAATTGCTCAATA TERM 4309 4815349 - 4815337 - g 72 -7.7 -3.76839 | opp_overlap 4815337 4815336, overlap 4815325 GAACTCGAATCCAAA CACTG GAT CAGTG ATTTAGATCGCGTCG Ava_3866 4815181 - 4815480 + | hypothetical protein TERM 4310 4815531 - 4815486 - T 83 -11.4 -3.05596 | gap 1 TAGCGCTTGATTTAA TGAT-GCTAGTGCAGGAAGGC GTTAA GCCTTCATACACTAACCATCA TAAAAAACTTTAGGG TERM 4311 4815551 - 4815539 - T 84 -4.9 -5.33785 | AACCATCATAAAAAA CTTTA GGG TAAAG GGTAGTATTGTTACT Ava_3867 4817333 - 4815603 - | WD-40 repeat-containing serine/threonin protein kinase TERM 4312 4815782 - 4815793 + g 71 -4.4 -4.77165 | TTTTATCCCAACTGG CACT AATC AGTG TTTTGTTATCGGCGG TERM 4313 4817462 - 4817472 + H 78 -6.8 -4.70266 | opp_overlap 4817461 4817462, overlap 4817449 4817469 CTGCTTGGGAAAAAT CCCA CCC TGGG TTTTTAGCTCATATT Ava_3868 4817864 - 4820929 + | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) TERM 4314 4821521 - 4821506 - T 72 -7.6 -3.67296 | TATTAGGGATTGAAA CTTTGC TAAA GCAAAG ACTCAACAAGAAAGT TERM 4315 4821549 - 4821535 - T 76 -6.4 -4.47456 | AGACTCAACAAGAAA GTGCTG TTG CAACAC CACATAATCCCTATT Ava_3869 4824756 - 4823842 - | AraC family transcriptional regulator TERM 4316 4824763 - 4824777 + H 73 -6.4 -4.3467 | CGACATCATTCTCAC CCCAAG GTT TTTGGG TTTTGGTGTAACAGT Ava_3870 4824933 - 4825346 + | hypothetical protein TERM 4317 4825469 - 4825438 - T 80 -11 -3.14136 | opp_overlap 4825439, overlap 4825430 CTACTAACTACTTAA GGGGTAATAGGTAA TTGC TTACCCATTACCCA TTACCATAATTAATT Ava_3871 4825915 - 4825484 - | hypothetical protein cobU 4826599 - 4826045 - | adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase Ava_3873 4826810 - 4827607 + | hypothetical protein Ava_3874 4827757 - 4828698 + | glycosyl transferase family protein Ava_3875 4828719 - 4829660 + | glycosyl transferase family protein Ava_3876 4829695 - 4830258 + | putative colanic acid biosynthesis acetyltransferase WcaF TERM 4318 4830332 - 4830297 - T 90 -12.6 -3.1552 | gap 1, overlap 4830300 GGGGAGGCAGGAAGA GAAGT-CGCAAGGAGGG TTT CCCTCCGGGCGAACTTC GGGGAGGCAGGGGAG TERM 4319 4830328 - 4830300 - T 78 -8.7 -3.71998 | overlap 4830297 GAGGCAGGAAGAGAA GTCGCAAGGAGGG TTT CCCTCCGGGCGAA CTTCGGGGAGGCAGG Ava_3877 4831226 - 4830423 - | hypothetical protein Ava_3878 4833679 - 4831331 - | sensor protein Ava_3879 4834812 - 4833844 - | hypothetical protein TERM 4320 4835640 - 4835620 - g 70 -5.5 -4.46854 | GGACTGAAGAAGAAA CTACATCTT TGG AAAATGCAG TGCGGCAGTTAGGTG gidB 4835055 - 4835792 + | glucose-inhibited division protein B Ava_3881 4835881 - 4836342 + | Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen Ava_3882 4837093 - 4836452 - | SSU ribosomal protein S30P / sigma 54 modulation protein lipB 4837737 - 4838345 + | lipoyltransferase Ava_3884 4838439 - 4838693 + | hypothetical protein Ava_3885 4839094 - 4838690 - | hypothetical protein Ava_3886 4839222 - 4840727 + | amino acid ABC transporter permease TERM 4321 4840752 - 4840740 - f 78 -7.7 -4.32201 | overlap 4840743 TGAATCAATTCAAAA TACCC TAC GGGTA GGCTGCGCCAACAAA Ava_3887 4840914 - 4841702 + | ADP-ribosylation/crystallin J1 Ava_3888 4842189 - 4842965 + | Fatty acid desaturase TERM 4322 4843282 - 4843299 + T 75 -7.1 -4.31815 | AAGAGAAAGATATTC GAGAAAA TATT TTTTCTC TTTATCTTGTGATTT Ava_3889 4844135 - 4843611 - | hypothetical protein gatC 4844747 - 4844457 - | aspartyl/glutamyl-tRNA amidotransferase subunit C Ava_3891 4845555 - 4844965 - | photosystem I assembly protein Ycf3 Ava_3892 4846271 - 4845570 - | hypothetical protein TERM 4323 4846324 - 4846334 + H 81 -2.6 -5.75538 | opp_overlap 4846324 AAATTCAGAATTAAT TAAT ACT ATTA TTTTTATTTTTTCAG Ava_3893 4846475 - 4847107 + | glutathione S-transferase-like protein Ava_3894 4847470 - 4847243 - | hypothetical protein TERM 4324 4847414 - 4847424 + g 91 -5.4 -5.72254 | TAGACTCCCATCATC TTGC TCG GCAA TTTTTTGTTGTTTGG TERM 4325 4847445 - 4847459 + g 80 -2.8 -5.47218 | opp_overlap 4847445 TGTTGTTTGGAATTA GGTTTA ACC TTAACC TTTTTTTGCATAACC TERM 4326 4847468 - 4847478 + g 78 -4 -5.14965 | CTTAACCTTTTTTTG CATA ACC TATG TTTTTTAGTACCAAT TERM 4327 4847594 - 4847574 - R 79 -8.3 -4.08216 | GTATCTTCTTGAAAA GTTCTTCCT TTT AGGTAGAAC CCAAGACGCACTTTT TERM 4328 4847650 - 4847671 + r 100 -8 -5.49568 | opp_overlap 4847650 TGACCACTGACAAAA CTCCATCC CTTTAT GGGTGGAG TTTTTATTTTGAATT TERM 4329 4847671 - 4847650 - R 76 -6.6 -4.43844 | gap 1, opp_overlap 4847650 TGACCACTGACAAAA CTCCATCCC TTTAT GGG-TGGAG TTTTTATTTTGAATT Ava_3895 4848295 - 4847735 - | hypothetical protein Ava_3896 4849053 - 4848307 - | hypothetical protein TERM 4330 4849937 - 4849918 - g 79 -10.8 -3.16217 | overlap 4849916 TATGAATATCCAAGA TGTGATCC GTAT GGATCACA ATAAGGTAAATATCT Ava_3897 4849313 - 4850368 + | hemerythrin HHE cation binding region TERM 4331 4850406 - 4850444 + F 100 -17.4 -4.75219 | overlap 4850408 ACATAATTGTTTTTG TTGCCCGCCCACTCCTTG CTT TATGGAGTGGGCGGGCTG TTTTGTTGATCATTG TERM 4332 4850408 - 4850442 + F 100 -22.2 -3.98016 | overlap 4850406 ATAATTGTTTTTGTT GCCCGCCCACTCCTTG CTT TATGGAGTGGGCGGGC TGTTTTGTTGATCAT Ava_3898 4850457 - 4850699 + | hypothetical protein TERM 4333 4851480 - 4851465 - g 80 -6.2 -4.90778 | opp_overlap 4851460 GCTATTCAAAGAAAA GAGTTT ACTA AAACTC GCTTCTACTTCTCCC Ava_3899 4850835 - 4851521 + | Mg-protoporphyrin IX methyl transferase Ava_3900 4851666 - 4852592 + | inosine/uridine-preferring nucleoside hydrolase Ava_3901 4852782 - 4853270 + | hypothetical protein TERM 4334 4853506 - 4853477 - g 70 -9.3 -2.75963 | opp_overlap 4853477, overlap 4853476 AGTCGCACCCCAAAC CCACCCACCACCT TGTT AGCTAGTGGATGG TTATTCATCATCGGT TERM 4335 4853597 - 4853608 + G 85 -7.2 -4.88407 | overlap 4853596 GCAATCACTCCCCTC GGCG GTGT CGCC TTTTTGCTTGGCTGG Ava_3902 4853282 - 4853662 + | hypothetical protein TERM 4336 4853831 - 4853874 + T 76 -9.6 -3.34005 | ATATTTTTTTATCTG GAAGTCCCTTACCTCACTCA GGGC TGAGTGAGGTAAGATACCAC TTCTACAGCTTAGTT Ava_3903 4855128 - 4853884 - | ribulose 1,5-bisphosphate carboxylase small subunit Ava_3904 4856321 - 4855671 - | lipolytic protein TERM 4337 4855779 - 4855790 + g 74 -4.4 -4.93296 | CTTAGCTTCATGTAG CCAA ACAC TTGG TTTTTCTAATAATGG TERM 4338 4856429 - 4856394 - R 93 -12 -4.15044 | opp_overlap 4856405, overlap 4856397 GTTGCGCCGAATAAA TGATGTAGAGACGTTG TATG CAACGTCTCTACAGTA CAGAATAAAGAGCAT TERM 4339 4856426 - 4856397 - R 100 -18.1 -3.10244 | opp_overlap 4856405, overlap 4856394 GCGCCGAATAAATGA TGTAGAGACGTTG TATG CAACGTCTCTACA GTACAGAATAAAGAG TERM 4340 4856555 - 4856532 - R 100 -10.4 -5.60993 | opp_overlap 4856534 CCTGTTATAAAAAAA GAGAGGTAAA CTCA TCTACCTCTC CTTAACGGATAAATT Ava_3905 4856919 - 4856590 - | ribulose 1,5-bisphosphate carboxylase small subunit Ava_3906 4857374 - 4856976 - | chaperonin-like RbcX rbcL 4858899 - 4857469 - | ribulose bisophosphate carboxylase Ava_3908 4859733 - 4860893 + | periplasmic ligand-binding sensor protein panB 4861020 - 4861793 + | 3-methyl-2-oxobutanoate hydroxymethyltransferase Ava_3910 4862729 - 4862070 - | hypothetical protein TERM 4341 4862538 - 4862566 + g 78 -9.5 -3.66028 | opp_overlap 4862537 4862540, overlap 4862540 4862543 TGTCGGCACATAAGG CACATCCGCAGGA CGT TCTTGCGGTTGGG TTGTTGGAGCTTGTG TERM 4342 4862543 - 4862561 + g 81 -11 -3.28745 | opp_overlap 4862537 4862540, overlap 4862540 4862538 GCACATAAGGCACAT CCGCAGGA CGT TCTTGCGG TTGGGTTGTTGGAGC Ava_3911 4864114 - 4862756 - | amino acid permease-associated region TERM 4343 4864261 - 4864245 - H 80 -2.3 -5.61596 | opp_overlap 4864253 ATGGGCATAAAAAAA TGACT GCTTTTG AGTCA CAGATTCAGATTGTC TERM 4344 4864967 - 4864995 + H 76 -6.2 -4.65895 | gap 2 GAATTTCGCACGTAT CTGGAGTAG--TAC AAC GTAATCTACTCCAG TTTTTCCCTCCCAAA TERM 4345 4865750 - 4865721 - g 72 -9.3 -3.22917 | gap 1, overlap 4865719 4865718 ACCAAAGCAAAATCA GGTGGTTGCGGATG CGA CACCAGCA-CCACC GTGGAAATGGACGAA TERM 4346 4866788 - 4866774 - g 71 -9.2 -3.04263 | opp_overlap 4866772 ATCTTAGTTGCAATA GCCACC AAA GGCGGC GGATTAGTTAACCAA TERM 4347 4867011 - 4866999 - g 79 -3.3 -5.27335 | overlap 4866957 TCTCCCAAAGAAAAA CTGCT CCA AGCCG GTATACAGACTGTTG Ava_3912 4865661 - 4867088 + | nitrogenase cofactor biosynthesis protein NifB Ava_3913 4867199 - 4867549 + | 4Fe-4S ferredoxin, iron-sulfur binding Ava_3914 4867552 - 4868754 + | aromatic amino acid beta-eliminating lyase/threonine aldolase Ava_3915 4868874 - 4869776 + | Fe-S cluster assembly protein NifU Ava_3916 4870039 - 4870926 + | nitrogenase reductase TERM 4348 4871125 - 4871107 - g 74 -4.6 -4.75288 | GTAGATGAAAATAAA GAACTTAT TAA AGAAGTTC TGAAAGCTTATCCCG TERM 4349 4871740 - 4871721 - g 71 -2 -5.09762 | overlap 4871723 4871726 GCTGAAGAAAGAAAA CAGACTCG ACTT CGAGCCAA GCCCCTATGATGTAG TERM 4350 4871738 - 4871723 - g 71 -6.8 -4.16668 | overlap 4871721 4871726 TGAAGAAAGAAAACA GACTCG ACTT CGAGCC AAGCCCCTATGATGT Ava_3917 4871065 - 4872507 + | nitrogenase molybdenum-iron protein alpha chain TERM 4351 4872675 - 4872715 + T 76 -7.5 -4.02396 | ATTTGGGACGGTTGG GCGATCACACTCGCTTAAT GAG ATGATGAGGGTGCGATCGC TTTGAATTTTATTTC Ava_3918 4873376 - 4872729 - | hypothetical protein TERM 4352 4872881 - 4872893 + g 86 -3.3 -5.59655 | CAGCTTTTGTGATTA GTCGG AAT CCAAC TTTTTTATTGATTTC Ava_3919 4873909 - 4873721 - | hypothetical protein TERM 4353 4874285 - 4874305 + G 79 -8.3 -4.11216 | opp_overlap 4874285 ACTCACACCGGAACA GTCAGCCTT GTT AAGGGTGAC TTTTGAGGGTAGACG Ava_3920 4874037 - 4874420 + | hypothetical protein Ava_3921 4876221 - 4874842 - | cytochrome P450 Ava_3922 4876828 - 4876250 - | hypothetical protein Ava_3923 4878330 - 4877176 - | hypothetical protein Ava_3924 4879251 - 4878586 - | hypothetical protein TERM 4354 4879248 - 4879258 + g 70 -5.4 -4.49337 | TTTTTTCCGTAAGCG CCAT TTA ATGG TTTTCTCCCTTGTCC Ava_3925 4879485 - 4880051 + | hypothetical protein Ava_3926 4880632 - 4880072 - | hypothetical protein Ava_3927 4881887 - 4880865 - | hypothetical protein Ava_3928 4883372 - 4881954 - | Phage integrase TERM 4355 4882411 - 4882399 - G 70 -7.7 -3.6502 | opp_overlap 4882399 CATTCTTTATGTAAA GGCAA TGC TTGCC TTTCACCAGTTTTAC TERM 4356 4882399 - 4882411 + g 70 -7.7 -3.60818 | opp_overlap 4882399 CATTCTTTATGTAAA GGCAA TGC TTGCC TTTCACCAGTTTTAC Ava_3929 4883546 - 4883632 + | nitrogenase molybdenum-iron protein alpha chain Ava_3930 4883832 - 4885370 + | nitrogenase molybdenum-iron protein beta chain Ava_3931 4885510 - 4885836 + | Mo-dependent nitrogenase-like TERM 4357 4885860 - 4885883 + F 83 -6 -5.1764 | opp_overlap 4885854 AGTTAGAGACTAGGG GCTAGGGAAA GGAT TTTCTCTTGC TTTTTGTGTTATCTA Ava_3932 4886154 - 4887596 + | nitrogenase MoFe cofactor biosynthesis protein NifE TERM 4358 4888297 - 4888277 - g 76 -6.8 -4.53034 | GTCACACAACTAAAA GAAGTCGG TCGTT CCGCCTTC ACCATCGCCTTGGGT Ava_3933 4887596 - 4888930 + | nitrogenase molybdenum-iron cofactor biosynthesis protein TERM 4359 4889295 - 4889285 - g 75 -2.4 -5.33921 | AAATTAATCAAAAAA GGTG TCA CTCC TGTAAAGGCGCGATC Ava_3934 4889036 - 4889449 + | dinitrogenase iron-molybdenum cofactor biosynthesis TERM 4360 4889626 - 4889614 - g 71 -3.3 -4.98352 | ACCAAACAAAAGAAA CGGGA AAT TTCCG TGCAAGGAGAAGTTG Ava_3935 4889446 - 4889922 + | hypothetical protein TERM 4361 4889987 - 4889940 - f 72 -9.2 -2.64803 | gap 1, opp_overlap 4889947, overlap 4889947 GGAGTTTTAAACGCA GCGAAAAGTTCCTCGAAGCCGGG TTT CCCGGCGTAG-GAAACTTTTCAA GACAGAGGGGCGCGG TERM 4362 4889980 - 4889947 - f 81 -8.1 -4.22346 | gap 1, opp_overlap 4889947, overlap 4889940 TAAACGCAGCGAAAA GTTCCTCGAAGCCGGG TTT CCCGGCGTAG-GAAAC TTTTCAAGACAGAGG Ava_3936 4890161 - 4890376 + | hypothetical protein Ava_3937 4890373 - 4890690 + | nitrogen fixation protein NifW Ava_3938 4890701 - 4891504 + | MoeZ/MoeB Ava_3939 4891584 - 4891955 + | HesB/YadR/YfhF Ava_3940 4892147 - 4892446 + | ferredoxin (2Fe-2S) TERM 4363 4892497 - 4892524 + F 90 -8.6 -4.39998 | opp_overlap 4892497, overlap 4892523 CAAGTGTAGCTTAAA TCAGGATGAA CTATATCC TTCATCCTGA TTTCTTATATAAATC TERM 4364 4892524 - 4892497 - f 75 -8.6 -3.61103 | opp_overlap 4892497 4892523 CAAGTGTAGCTTAAA TCAGGATGAA CTATATCC TTCATCCTGA TTTCTTATATAAATC Ava_3941 4892502 - 4892813 + | hypothetical protein TERM 4365 4892887 - 4892923 + T 81 -8.2 -4.20516 | gap 1, overlap 4892888 4892891 GATGTACTTTATTCT GGACTGTAGAGACTTTG CACA CAAGGTCTCTACA-TCA TTTCTTGGGTACAAC TERM 4366 4892888 - 4892922 + T 84 -11.7 -3.11988 | gap 1, overlap 4892887 4892891 ATGTACTTTATTCTG GACTGTAGAGACTTTG CACA CAAGGTCTCTACA-TC ATTTCTTGGGTACAA TERM 4367 4892891 - 4892920 + T 100 -14.5 -3.11702 | overlap 4892888 4892887 TACTTTATTCTGGAC TGTAGAGACTTTG CACA CAAGGTCTCTACA TCATTTCTTGGGTAC TERM 4368 4893038 - 4893004 - T 100 -10.3 -4.9138 | opp_overlap 4893008, overlap 4893008 ATTAGGGAAATAAAA TAAATAGAGACTTTA ATATA TAACGTCTCTATTTA GGGAATAAAGGTAAG TERM 4369 4893034 - 4893008 - T 82 -6.7 -4.96996 | opp_overlap 4893008, overlap 4893004 GGGAAATAAAATAAA TAGAGACTTTA ATATA TAACGTCTCTA TTTAGGGAATAAAGG Ava_3942 4893282 - 4893073 - | molybdenum-pterin binding protein Ava_3943 4894000 - 4894593 + | CBS domain-containing protein TERM 4370 4894643 - 4894670 + F 86 -10 -4.18762 | gap 1, opp_overlap 4894647, overlap 4894644 4894647 ATAGCATTGTGTTTA G-TAATGGTGGGC AAT GTCCACCATTATC TTTTCCATGCAAATT TERM 4371 4894644 - 4894668 + F 100 -13.7 -3.69216 | opp_overlap 4894647, overlap 4894643 4894647 TAGCATTGTGTTTAG TAATGGTGGGC AAT GTCCACCATTA TCTTTTCCATGCAAA TERM 4372 4894647 - 4894665 + G 90 -11 -3.97622 | opp_overlap 4894647, overlap 4894644 4894643 CATTGTGTTTAGTAA TGGTGGGC AAT GTCCACCA TTATCTTTTCCATGC Ava_3944 4894646 - 4895170 + | ankyrin Ava_3945 4895157 - 4896443 + | hypothetical protein Ava_3946 4896461 - 4896835 + | hypothetical protein Ava_3947 4897372 - 4896911 - | peptidase M52, hydrogen uptake protein TERM 4373 4897512 - 4897547 + r 100 -12 -4.41348 | opp_overlap 4897523, overlap 4897515 ACTTACTTCATTCTG TACTGTAGAGACGTTG CATG CAACGTCTCTACATCA TTTATTTGGCGCAAC TERM 4374 4897515 - 4897544 + r 100 -18.1 -3.18452 | opp_overlap 4897523, overlap 4897512 TACTTCATTCTGTAC TGTAGAGACGTTG CATG CAACGTCTCTACA TCATTTATTTGGCGC Ava_3948 4898514 - 4897900 - | hypothetical protein TERM 4375 4898576 - 4898610 + H 90 -7.3 -5.14965 | gap 1, overlap 4898577 4898578 TGTGCTTTATTCTGG AC-TGTAGAGATGTTG TATG CAACGTCTCTACATGA TTTTTTGATGCAACT TERM 4376 4898577 - 4898609 + H 88 -10.8 -3.68256 | gap 1, overlap 4898576 4898578 GTGCTTTATTCTGGA C-TGTAGAGATGTTG TATG CAACGTCTCTACATG ATTTTTTGATGCAAC TERM 4377 4898578 - 4898607 + H 100 -14.5 -3.41701 | overlap 4898577 4898576 TGCTTTATTCTGGAC TGTAGAGATGTTG TATG CAACGTCTCTACA TGATTTTTTGATGCA Ava_3949 4898776 - 4899768 + | hypothetical protein Ava_3950 4900253 - 4899831 - | hypothetical protein Ava_3951 4901028 - 4900510 - | topology modulation protein gatB 4901292 - 4902767 + | aspartyl/glutamyl-tRNA amidotransferase subunit B TERM 4378 4902886 - 4902909 + F 79 -7.4 -4.52502 | opp_overlap 4902884 4902886 GCACCCTAATAAACA GGAGAGTTAC GCAA GTTGCTCTCC TTATTTCTTTTTAAC TERM 4379 4903042 - 4903020 - f 100 -19.2 -3.53761 | overlap 4903008 GAACCTCTCTCCAAA CCTCTCCCCG CGT CGGGGAGAGG CTTAAAACCCTGATT TERM 4380 4903079 - 4903113 + F 87 -12.2 -3.19192 | TACTCAGTTATAGGT TTTTAGCCCCTTCCCT TGT AGGGAAGGGGTTGGGG TTAGGTTCCGTCGAA TERM 4381 4903339 - 4903377 + F 77 -10.4 -2.78935 | opp_overlap 4903339 4903338 TTTTAACATCGAAAT TTTAGATCCCAGACTTCT TTA AGAAGTTGGGGATCTAGC TATGCTAAAAAGTAT TERM 4382 4903667 - 4903638 - f 81 -7.3 -4.56597 | CCCCTCGTCTAAAAA TACTAGTACCCTG CACA CAAAATACTAGTA CCTATATCCCAAGAG Ava_3953 4903837 - 4904589 + | Serine O-acetyltransferase Ava_3954 4904592 - 4904831 + | hypothetical protein TERM 4383 4904984 - 4904964 - f 81 -2.6 -5.67063 | TTGATTATAAAAAAA TGCAGTTC ACCAA AAACTACA GCTTCATGATTTCCA Ava_3955 4905028 - 4905231 + | hypothetical protein TERM 4384 4906725 - 4906711 - g 80 -2.8 -5.4833 | overlap 4906712 TCAGTTAAGAAAAAA CGCAGT TTG ACTACA GAAGAACTGTTGAAC aksA 4905646 - 4906779 + | trans-homoaconitate synthase Ava_3957 4906766 - 4907053 + | NifZ Ava_3958 4907028 - 4907231 + | NifT/FixU TERM 4385 4907301 - 4907263 - f 90 -11.2 -4.3586 | opp_overlap 4907269, overlap 4907265 4907267 TCAGCCACATGAAAA TCTAGATTCCCGACTTTT CCA AGAAATCGGGAATCTATA ACTCAACCATGCTCG TERM 4386 4907299 - 4907265 - f 91 -13.8 -2.52138 | opp_overlap 4907269, overlap 4907263 4907267 AGCCACATGAAAATC TAGATTCCCGACTTTT CCA AGAAATCGGGAATCTA TAACTCAACCATGCT TERM 4387 4907297 - 4907267 - f 84 -12 -2.79239 | opp_overlap 4907269, overlap 4907265 4907263 CCACATGAAAATCTA GATTCCCGACTTTT CCA AGAAATCGGGAATC TATAACTCAACCATG TERM 4388 4907788 - 4907776 - g 93 -9.1 -4.56775 | ACTGGTTGTCAAAAA CGCTG TAG CAGCG CCCCTAACTGTGTTC Ava_3959 4907341 - 4907907 + | hypothetical protein Ava_3960 4908317 - 4907946 - | hypothetical protein TERM 4389 4908392 - 4908340 - R 76 -5 -5.00884 | gap 2, opp_overlap 4908352 4908354 4908356, overlap 4908342 4908343 4908356 ATCTTCCTCAAAAAA TACTTTTCCCTAGATACCCGACTTCT TAA AGAAGTCGGGTATCT-GTGTAC-GTC AAGCTAACTTTGCAA TERM 4390 4908390 - 4908342 - R 76 -7.6 -4.13561 | gap 2, opp_overlap 4908352 4908354 4908356, overlap 4908340 4908343 4908356 CTTCCTCAAAAAATA CTTTTCCCTAGATACCCGACTTCT TAA AGAAGTCGGGTATCT-GTGTAC-G TCAAGCTAACTTTGC TERM 4391 4908352 - 4908382 + r 100 -21.4 -2.91383 | opp_overlap 4908342 4908343 4908340 4908356, overlap 4908354 4908356 AAATACTTTTCCCTA GATACCCGACTTCT TAA AGAAGTCGGGTATC TGTGTACGTCAAGCT TERM 4392 4908354 - 4908380 + r 100 -18.2 -3.0094 | opp_overlap 4908342 4908343 4908340 4908356, overlap 4908352 4908356 ATACTTTTCCCTAGA TACCCGACTTCT TAA AGAAGTCGGGTA TCTGTGTACGTCAAG TERM 4393 4908356 - 4908378 + r 100 -16.4 -3.05993 | opp_overlap 4908342 4908343 4908340 4908356, overlap 4908354 4908352 ACTTTTCCCTAGATA CCCGACTTCT TAA AGAAGTCGGG TATCTGTGTACGTCA TERM 4394 4908378 - 4908356 - R 100 -16.4 -2.87211 | opp_overlap 4908356 4908354 4908352, overlap 4908342 4908343 4908340 ACTTTTCCCTAGATA CCCGACTTCT TAA AGAAGTCGGG TATCTGTGTACGTCA TERM 4395 4908447 - 4908475 + r 73 -8.7 -3.31792 | overlap 4908448 CCTTCTCCCCCGAAG TTCGCCCGGAGGG AAA CCCTCCTTGCGAC TTCTCCCCATGCTCC TERM 4396 4908448 - 4908474 + r 83 -12.2 -2.58861 | overlap 4908447 CTTCTCCCCCGAAGT TCGCCCGGAGGG AAA CCCTCCTTGCGA CTTCTCCCCATGCTC Ava_3961 4908822 - 4908559 - | hypothetical protein Ava_3962 4910580 - 4908964 - | MscS mechanosensitive ion channel Ava_3963 4910980 - 4912257 + | S-adenosyl-L-homocysteine hydrolase TERM 4397 4912287 - 4912310 + T 100 -11.1 -5.72622 | overlap 4912281 GTTACTTATGTTTTG GGGATAAGC CCGAAA GCTTATCCC TTTTTTGTTTCTCGC Ava_3964 4914514 - 4912352 - | hypothetical protein Ava_3965 4915002 - 4914811 - | hypothetical protein leuD 4916009 - 4915401 - | isopropylmalate isomerase small subunit TERM 4398 4916059 - 4916049 - R 70 -2.6 -5.21709 | TTCCAGATCAAAAAA TATT CAA AATA TAGGGTGCGTCAGTA Ava_3967 4917642 - 4916239 - | isopropylmalate isomerase large subunit TERM 4399 4917760 - 4917774 + r 85 -11.4 -3.40403 | opp_overlap 4917751 4917770 TGAAAAGTTTCCTAC GGAGGG AAA CCCTCC TTCTCCTGACGGAGA Ava_3968 4918705 - 4917896 - | short chain dehydrogenase TERM 4400 4918671 - 4918686 + g 71 -3.2 -4.99043 | ATTCCAGCCGATGCA CCAGTG AGAA CAATGG TTTTATTTCTAAAGC Ava_3969 4918861 - 4919835 + | 50S ribosomal protein L11P methyltransferase TERM 4401 4920516 - 4920574 + T 100 -19.1 -3.67 | gap 2, opp_overlap 4920511 4920517, overlap 4920516 4920517 ATTATTAAATTACCA -A-GTAGGGTGGGCAATGCCCACCAAAAC CGG GATACGGTGGGCATTGCCCACCCTACGTA TATTTTAGAAATTAA TERM 4402 4920516 - 4920572 + T 100 -26.7 -3.41023 | opp_overlap 4920511 4920517, overlap 4920516 4920517 ATTATTAAATTACCA AGTAGGGTGGGCAATGCCCACCAAAAC CGG GATACGGTGGGCATTGCCCACCCTACG TATATTTTAGAAATT TERM 4403 4920571 - 4920517 - T 100 -32.4 -3.34227 | opp_overlap 4920516 4920516 4920517, overlap 4920511 TTATTAAATTACCAA GTAGGGTGGGCAATGCCCACCAAAAC CGG GATACGGTGGGCATTGCCCACCCTAC GTATATTTTAGAAAT TERM 4404 4920517 - 4920571 + T 100 -30.2 -2.63891 | opp_overlap 4920511 4920517, overlap 4920516 4920516 TTATTAAATTACCAA GTAGGGTGGGCAATGCCCACCAAAAC CGG GATACGGTGGGCATTGCCCACCCTAC GTATATTTTAGAAAT Ava_3970 4921395 - 4920625 - | Short-chain dehydrogenase/reductase SDR Ava_3971 4921648 - 4921436 - | XRE family transcriptional regulator TERM 4405 4921740 - 4921703 - H 84 -7.7 -4.57353 | gap 1 TTGTATCATATAAAA CGATCGC-CCCCCAGCCT AGA AAACAGAGAGAGCGATCG TAGTACTCAAATGTA Ava_3972 4921847 - 4922332 + | hypothetical protein TERM 4406 4922557 - 4922592 + T 77 -9.9 -3.24708 | gap 1, opp_overlap 4922556 4922553 4922548, overlap 4922554 4922559 AAAATATCTAAGTAT CT-GTATGCTGGGCAA GGGTA TTGCCCACCATACTAG TATATTTCAGAAATC TERM 4407 4922559 - 4922589 + T 86 -12.7 -2.80821 | opp_overlap 4922556 4922553 4922548, overlap 4922557 4922554 AATATCTAAGTATCT GTATGCTGGGCAA GGGTA TTGCCCACCATAC TAGTATATTTCAGAA TERM 4408 4923134 - 4923156 + T 100 -14.2 -3.00774 | overlap 4923136 ATATTTAGGTATTTG TAGGGTGGGC AAT GCCCATCCTA TATCTAATTCAAATA TERM 4409 4923136 - 4923154 + T 85 -12.4 -3.05647 | overlap 4923134 ATTTAGGTATTTGTA GGGTGGGC AAT GCCCATCC TATATCTAATTCAAA Ava_3973 4923516 - 4923352 - | hypothetical protein TERM 4410 4923748 - 4923692 - R 100 -15.6 -3.4314 | gap 1, opp_overlap 4923702, overlap 4923690 4923695 TAAATGGTAATAATA TCAGTG-GTAATTGGTAATAGCCCATA AGTA TATGTGCTATTACCAATTACTCACCCA CATTTGATGATTTAG TERM 4411 4923745 - 4923695 - R 100 -19.5 -2.85813 | gap 1, opp_overlap 4923702, overlap 4923690 4923692 ATGGTAATAATATCA GTG-GTAATTGGTAATAGCCCATA AGTA TATGTGCTATTACCAATTACTCAC CCACATTTGATGATT TERM 4412 4923702 - 4923737 + r 100 -15 -3.14463 | opp_overlap 4923695 4923690 4923692 TAATATCAGTGGTAA TTGGTAATAGCCCATA AGTA TATGTGCTATTACCAA TTACTCACCCACATT Ava_3974 4926528 - 4923760 - | hypothetical protein TERM 4413 4924412 - 4924398 - G 71 -4.2 -4.91084 | CACTCAACAATAAAA CAGCAT CAT AAGCTG TATCGCCACGCAAAT TERM 4414 4929302 - 4929320 + G 73 -3.8 -5.0133 | overlap 4929303 4929306 TAGCCAGACAATTTG ACGAGGAT GCA ATCCTTGA TTTTTTGACACAATA Ava_3975 4926919 - 4929354 + | Cache sensor hybrid histidine kinase Ava_3976 4929351 - 4930646 + | response regulator receiver Signal transduction histidine kinase TERM 4415 4930668 - 4930717 + F 74 -4.5 -5.03994 | opp_overlap 4930662 4930695 4930697, overlap 4930697 TGCTATAAATAAAAG TTTTAGTGAGAACTTTAGTTATA ACAA TAGGACTAAAGTCCTTACTACGA TTTTTCTCTATAAAG Ava_3977 4931051 - 4931533 + | hypothetical protein Ava_3978 4931625 - 4932293 + | hypothetical protein TERM 4416 4932300 - 4932290 - T 81 -4 -5.49579 | TGACAAAAAACAAAA CTAA TTA TTAG AAAATGTCAATTTTT Ava_3979 4932740 - 4932360 - | hypothetical protein TERM 4417 4932837 - 4932895 + r 77 -9.9 -3.14344 | gap 1 AGTCGCCCCGTCGCT -TCGGTAATGGGTAATGGGTAATAGCTA CTCT TACCAATTACCAATTACCAATTACCGAA TTCCTCAGAAGCATA Ava_3980 4934234 - 4933158 - | 3-deoxy-7-phosphoheptulonate synthase TERM 4418 4933622 - 4933636 + g 76 -2.8 -5.41143 | TCAGTAGCACTGGCT TAGTAG TAG CTCCTA TTTTTTTGAGAAGTG TERM 4419 4934455 - 4934420 - R 76 -7.6 -4.15044 | opp_overlap 4934431, overlap 4934423 GTTGTGTCCAATAAA TGATGTAGAGACGTTG CATG CAACGTCTCTACCGTA CAGAATAAAGTGCAT TERM 4420 4934452 - 4934423 - R 100 -13.7 -3.10244 | opp_overlap 4934431, overlap 4934420 GTGTCCAATAAATGA TGTAGAGACGTTG CATG CAACGTCTCTACC GTACAGAATAAAGTG Ava_3981 4935709 - 4934756 - | NAD-dependent epimerase/dehydratase Ava_3982 4936514 - 4935771 - | hypothetical protein Ava_3983 4937647 - 4936667 - | hypothetical protein TERM 4421 4937732 - 4937761 + r 91 -9.5 -4.65168 | gap 1, opp_overlap 4937737, overlap 4937737 CAAGGCTTGATTTTG TATAACCTCAGACT GGC GGTCTGAGG-TATA TTTTTGGCCTGTGCT TERM 4422 4937757 - 4937737 - R 82 -11.2 -3.30124 | opp_overlap 4937732 4937737 CTTGATTTTGTATAA CCTCAGAC TGGCG GTCTGAGG TATATTTTTGGCCTG TERM 4423 4937737 - 4937757 + r 90 -11.9 -3.54926 | opp_overlap 4937737, overlap 4937732 CTTGATTTTGTATAA CCTCAGACT GGC GGTCTGAGG TATATTTTTGGCCTG Ava_3984 4942722 - 4937791 - | amino acid adenylation TERM 4424 4941226 - 4941237 + g 71 -3 -4.95618 | ATAATCGATGACATC TATG GGGC CATA TTTGTTTTTAATATT TERM 4425 4943006 - 4942985 - R 91 -6.6 -5.29846 | opp_overlap 4942985 AATTCCAAACAAAAA CTCTACCC ACAAGG AGGTAGAG TTTTTCATGCTAATT TERM 4426 4942985 - 4943006 + r 78 -5.9 -4.7871 | opp_overlap 4942985 AATTCCAAACAAAAA CTCTACC CACAAGGA GGTAGAG TTTTTCATGCTAATT TERM 4427 4943112 - 4943090 - R 100 -19.2 -3.53761 | overlap 4943078 GAACCCCTCTCCAAA CCTCTCCCCG ACG CGGGGAGAGG CTTAAAACCCTGATT TERM 4428 4943149 - 4943183 + r 100 -15.8 -3.19192 | opp_overlap 4943148 TACTCAGTTATAGAT TTTCAGCCCCTTCCCT TGT AGGGAAGGGGTTGGGG TTAGGTTCAGTCGAA Ava_3985 4950899 - 4943244 - | Short-chain dehydrogenase/reductase SDR TERM 4429 4945514 - 4945501 - G 71 -6.7 -4.12474 | overlap 4945512 AAGGAAGAAGAACAA GCAGT ACTA ACTGC CATACTTGGCCCCTT TERM 4430 4948144 - 4948120 - G 100 -12.9 -3.80625 | opp_overlap 4948121, overlap 4948121 GGGGGAGAATTCAAA GCCTCTCTCCT CGT AGGAGAGAGGT TTGGAGAGAGGTTTT TERM 4431 4948121 - 4948143 + g 100 -16.4 -3.5394 | opp_overlap 4948120 4948121 GGGGAGAATTCAAAG CCTCTCTCCT CGT AGGAGAGAGG TTTGGAGAGAGGTTT TERM 4432 4948143 - 4948121 - G 100 -16.4 -2.88054 | opp_overlap 4948121, overlap 4948120 GGGGAGAATTCAAAG CCTCTCTCCT CGT AGGAGAGAGG TTTGGAGAGAGGTTT TERM 4433 4949253 - 4949275 + g 71 -8.5 -3.53444 | overlap 4949248 GACTGACGTGCTGGT CTGCTTTTG GCTAG CAAAAGCGG TTAGTTGTTCGCGCA TERM 4434 4950813 - 4950832 + g 81 -7.2 -4.65933 | gap 1 TTTGGCATTCTCCAC TGCGT-CCA ACT TGGCACGCA TTTCTTTTAAGGCTA TERM 4435 4950954 - 4950933 - R 81 -7.3 -4.68132 | opp_overlap 4950934, overlap 4950934 TAATAGACAAAGAAA TTGAGTCTG AAGC CAGACTCAT TTAGCTGTGTAAGTA TERM 4436 4950953 - 4950934 - R 82 -10.8 -3.39252 | opp_overlap 4950934, overlap 4950933 AATAGACAAAGAAAT TGAGTCTG AAGC CAGACTCA TTTAGCTGTGTAAGT TERM 4437 4950934 - 4950953 + r 88 -10.8 -3.74345 | opp_overlap 4950934 4950933 AATAGACAAAGAAAT TGAGTCTG AAGC CAGACTCA TTTAGCTGTGTAAGT Ava_3986 4956667 - 4951043 - | Short-chain dehydrogenase/reductase SDR TERM 4438 4954123 - 4954135 + g 76 -7.7 -4.07885 | ACTTACGACCCATTC CCAGT AAA ACTGG TTTTGGCCCGACCTC TERM 4439 4956382 - 4956372 - G 71 -2.4 -5.09225 | ACCTCATTTAAAAAA CCGC CGT GCTG GGTGTACATTTTCCC Ava_3987 4958652 - 4956664 - | AMP-dependent synthetase and ligase TERM 4440 4957786 - 4957802 + g 81 -9.5 -3.85698 | TTTACCAAACTTGTC TTGCCAA CGT TTGGCAA TTTCTACAGGCAAAC TERM 4441 4958780 - 4958736 - R 79 -7.3 -4.44461 | opp_overlap 4958737 4958739 4958744, overlap 4958737 4958739 4958744 AATAAGTGGATAAAA TTAGTAAACAGTCAACAGT TCAATTG ACTGCCGACTGTTTACTGT TGACTATTGACTATT TERM 4442 4958737 - 4958779 + r 75 -9.3 -3.19789 | opp_overlap 4958736 4958737 4958739 4958744, overlap 4958739 4958744 ATAAGTGGATAAAAT TAGTAAACAGTCAACAGTT CAATT GACTGCCGACTGTTTACTG TTGACTATTGACTAT TERM 4443 4958779 - 4958737 - R 80 -10.8 -3.25592 | opp_overlap 4958737 4958739 4958744, overlap 4958736 4958739 4958744 ATAAGTGGATAAAAT TAGTAAACAGTCAACAGT TCAATTG ACTGCCGACTGTTTACTG TTGACTATTGACTAT TERM 4444 4958739 - 4958777 + r 77 -9.7 -3.1577 | opp_overlap 4958737 4958736 4958739 4958744, overlap 4958737 4958744 AAGTGGATAAAATTA GTAAACAGTCAACAGTT CAATT GACTGCCGACTGTTTAC TGTTGACTATTGACT TERM 4445 4958777 - 4958739 - R 95 -13.4 -3.18446 | opp_overlap 4958739 4958737 4958744, overlap 4958737 4958736 4958744 AAGTGGATAAAATTA GTAAACAGTCAACAGT TCAATTG ACTGCCGACTGTTTAC TGTTGACTATTGACT TERM 4446 4958772 - 4958744 - R 74 -7.5 -3.94664 | opp_overlap 4958744 4958739 4958737, overlap 4958739 4958737 4958736 GATAAAATTAGTAAA CAGTCAACAGT TCAATTG ACTGCCGACTG TTTACTGTTGACTAT Ava_3988 4960511 - 4958808 - | histidine ammonia-lyase TERM 4447 4959596 - 4959608 + g 70 -7.7 -3.64103 | opp_overlap 4959589 GAATCAACTCGTGAT CACGA TAA TCGTG TTTACCATCTAACTC TERM 4448 4960838 - 4960851 + r 74 -2.5 -5.27779 | TATGCAAATATTCCC TAAAT TGGA ATTTA TTTTTTGGTGTTCCC TERM 4449 4960905 - 4960927 + r 71 -4.8 -4.57341 | opp_overlap 4960905 4960921 4960922, overlap 4960922 TGTCCTTGAAAAAGG GGGGGAAT GAATGAA AGTCCCCC TTTTTAAGGGGGATT TERM 4450 4960941 - 4960921 - R 86 -9.7 -4.00348 | opp_overlap 4960905 4960922, overlap 4960905 4960922 GGGGAATGAATGAAA GTCCCCCTT TTT AAGGGGGAT TTAGGGGGATCTAAA TERM 4451 4960940 - 4960922 - R 93 -13.2 -2.99727 | opp_overlap 4960905 4960922, overlap 4960905 4960921 GGGAATGAATGAAAG TCCCCCTT TTT AAGGGGGA TTTAGGGGGATCTAA TERM 4452 4960922 - 4960940 + r 100 -13.2 -3.55071 | opp_overlap 4960905 4960922 4960921, overlap 4960905 GGGAATGAATGAAAG TCCCCCTT TTT AAGGGGGA TTTAGGGGGATCTAA Ava_3989 4962323 - 4961091 - | major facilitator transporter TERM 4453 4961442 - 4961430 - G 75 -3.3 -5.14985 | TGAAAGAGATAAAAA CGACA ATA TGACG ATAAACACACTCATA TERM 4454 4962227 - 4962211 - G 76 -2.9 -5.40625 | overlap 4962226 ATACCAGACAAAAAA GCTATGC TAT ACAAAGC TGGTAATCCAGTAGA TERM 4455 4962314 - 4962345 + g 82 -6.6 -4.77165 | opp_overlap 4962342, overlap 4962316 GATAAATTACGTGGT TTGAGTGCATCGTA TAAA TACGATGCAAGCGA TTTTGTTATCGCAAA Ava_3990 4963244 - 4962468 - | thioesterase TERM 4456 4963181 - 4963226 + g 76 -10 -3.26933 | gap 2, opp_overlap 4963181, overlap 4963179 AACAGAATAAGCGAA GTTGGGCCTTTGGATTAGGCTG AGGG CAGC-TAATCC-AAGGATCAAC TATTAGTCTTGCTGT Ava_3991 4964117 - 4963755 - | hypothetical protein Ava_3992 4964493 - 4965515 + | hypothetical protein TERM 4457 4965540 - 4965560 + F 89 -7.6 -4.99134 | gap 1 TAAATTTGTTATCCA CCCTCAGCT ACCC AGC-GAGGG TTTTTCGTTTGAACT Ava_3993 4965906 - 4966076 + | hypothetical protein TERM 4458 4966133 - 4966153 + T 93 -7.5 -5.23316 | opp_overlap 4966133 TACTTCTCCTATCAA CCCCAGTTA GTT TCGCTGGGG TTTTTTGCTATCGTC TERM 4459 4966319 - 4966354 + T 91 -9.8 -4.41348 | opp_overlap 4966330, overlap 4966320 4966322 CAATCTCTCGTTGAG TACTGTAGAGACGTTG TATG CAACGTCTCTACATCG TTTATTTAGCGCAAC TERM 4460 4966320 - 4966353 + T 80 -11.1 -3.24488 | opp_overlap 4966330, overlap 4966319 4966322 AATCTCTCGTTGAGT ACTGTAGAGACGTTG TATG CAACGTCTCTACATC GTTTATTTAGCGCAA TERM 4461 4966322 - 4966351 + T 100 -18.1 -3.18452 | opp_overlap 4966330, overlap 4966320 4966319 TCTCTCGTTGAGTAC TGTAGAGACGTTG TATG CAACGTCTCTACA TCGTTTATTTAGCGC Ava_3994 4966923 - 4966396 - | GCN5-related N-acetyltransferase TERM 4462 4967190 - 4967162 - H 100 -13.3 -4.42386 | TTGCTATTTATAAAA CGCCAATCCCTAT TCA ATAGAGATTGACG CAAGACTCATTCGAT TERM 4463 4967506 - 4967541 + H 77 -10.5 -2.8763 | gap 1, opp_overlap 4967500, overlap 4967504 AATAAATATCCTCGC GCC-TAACGCACCATC CGTGA GGCGGTGCGTTACGGC TAAATTTTCTTGTCT TERM 4464 4969779 - 4969769 - g 75 -3.2 -5.10029 | AGCAATTGCAAAAAA TGCC AGA AGCA ACGCAAGAGATTTTA TERM 4465 4970067 - 4970053 - g 71 -4.2 -4.77036 | opp_overlap 4970056, overlap 4970055 4970056 CTTGATGACCAAAAA CAGGTG ACA CACCTC ACTATTGGAAAATTG TERM 4466 4970437 - 4970418 - g 81 -7.2 -4.64992 | TCTAAAAAACACAAA TGACCTGT TGGA ACAAGTCA AAGTTTATGAAATAA Ava_3995 4967923 - 4973307 + | Serine/threonine protein kinase and Signal transduction histidine kinase (STHK) with GAF sensor Ava_3996 4975049 - 4973544 - | metallophosphoesterase Ava_3997 4975866 - 4975381 - | hypothetical protein Ava_3998 4976184 - 4977011 + | hypothetical protein Ava_3999 4982738 - 4977204 - | phytase TERM 4467 4977460 - 4977447 - G 74 -6.7 -4.30416 | ATTAGCAATCCAAAA CTGGT CAGC ACCAG CGCCACCACTCAGAC TERM 4468 4982330 - 4982296 - G 74 -6.4 -4.42667 | opp_overlap 4982328 GGAAAACTACCAAAA CCAAAGGCATCATCAC CAT ATCCTGATGCCCCTGG AGTGGTCACAGCTAC TERM 4469 4982829 - 4982808 - H 83 -5.9 -5.13722 | opp_overlap 4982812, overlap 4982812 GGCATCAAAAGAAAA TCAACTGCA AAGA TGCAGTTTA CAGTTAGAGCAATCA TERM 4470 4983388 - 4983402 + H 83 -8.6 -4.20797 | overlap 4983401 GCTATATTACAATCG CTCAGT TTG ACTGAG TTTCTGTAATTTTAA Ava_4000 4983460 - 4984305 + | DNA/RNA non-specific endonuclease TERM 4471 4984357 - 4984333 - T 73 -7.1 -4.01411 | CACTAAAAACTTAAA GCCTGTCTGTA AAT TATGGACAGGC TAAGGTGATACGCAC TERM 4472 4984408 - 4984454 + T 100 -17.5 -4.08767 | opp_overlap 4984413 4984415 TCAGGGCCGTCCATA GTCAAGAGTCCAGAGTCAAAG GCTAG CTTGGACTCTGGACTTTGGAC TTTTGACAACCTGAG TERM 4473 4984449 - 4984413 - T 87 -12.4 -3.12351 | opp_overlap 4984408, overlap 4984415 GCCGTCCATAGTCAA GAGTCCAGAGTCAAAG GCTAG CTTGGACTCTGGACTT TGGACTTTTGACAAC TERM 4474 4984447 - 4984415 - T 100 -15 -3.12327 | opp_overlap 4984408, overlap 4984413 CGTCCATAGTCAAGA GTCCAGAGTCAAAG GCTAG CTTGGACTCTGGAC TTTGGACTTTTGACA Ava_4001 4984917 - 4984516 - | sugar-non-specific nuclease inhibitor NuiA-like Ava_4002 4985391 - 4984945 - | hypothetical protein TERM 4475 4985655 - 4985671 + r 73 -8.7 -3.39142 | overlap 4985665 ATTTACAATCAATCC CCCTTGT ACT GCAAGGG TTGCTTGCCTATCAG Ava_4003 4986077 - 4985718 - | hypothetical protein Ava_4004 4987417 - 4986176 - | hypothetical protein Ava_4005 4988914 - 4987448 - | hypothetical protein Ava_4006 4990397 - 4989270 - | hypothetical protein TERM 4476 4990171 - 4990157 - G 71 -5 -4.63932 | CATCTGGTAACAAAA CAATAC TTG GTACTG GTACAGATTTAAAAC Ava_4007 4990575 - 4991009 + | hypothetical protein Ava_4008 4992417 - 4991164 - | hypothetical protein Ava_4009 4994600 - 4992612 - | peptidase S8 and S53, subtilisin, kexin, sedolisin TERM 4477 4993441 - 4993405 - G 86 -11.6 -3.32294 | opp_overlap 4993403 4993433 4993435 CCAAAGTCGTTACAA GCCGCGACAGCTATGA CCTTT TCATAGCTGGCGTAGC CGTCATTATCTACGC TERM 4478 4994228 - 4994256 + g 81 -7.5 -4.61199 | GGCAGAAACTAACGT CTTCTTCGTGG TCAAACT TCACGAAGAGG TTTTCTGTGTAAACT TERM 4479 4994436 - 4994422 - G 71 -8.6 -3.53012 | opp_overlap 4994421 CCTGCTTGGCTGAAA CGAGTT GAT AACTCG AATTGATTGAGGATA Ava_4010 4994941 - 4995519 + | hypothetical protein TERM 4480 4995782 - 4995804 + T 81 -9.3 -3.7282 | opp_overlap 4995782 AATTAATGGCAGCAA TTCCCAATA GCAAG TATTGGGAA TTATTAATCACCTAA TERM 4481 4995804 - 4995782 - T 75 -9.3 -3.19425 | opp_overlap 4995782 AATTAATGGCAGCAA TTCCCAATA GCAAG TATTGGGAA TTATTAATCACCTAA TERM 4482 4995956 - 4995932 - T 82 -11.5 -2.91912 | opp_overlap 4995933, overlap 4995947 TTAGTCATTGACATA CTCACTGCTCT GAA AGAGCAGTGAT TCTTGACGGCTCACA TERM 4483 4995933 - 4995955 + T 100 -15 -3.62597 | opp_overlap 4995932 4995947 TAGTCATTGACATAC TCACTGCTCT GAA AGAGCAGTGA TTCTTGACGGCTCAC Ava_4011 4996570 - 4996067 - | hypothetical protein TERM 4484 4996300 - 4996286 - G 100 -8.6 -4.90136 | opp_overlap 4996285 AACTAATAGTAAAAA GCCATT GAC AATGGC GTAATTACCAAAACG TERM 4485 4996699 - 4996716 + r 79 -11.3 -3.04334 | opp_overlap 4996701, overlap 4996693 4996701 TTGTCAGTTGTCAGA GACGCGA TTAA TCGCGTC TGTACTTGTATTTAG Ava_4012 4997516 - 4996728 - | creatininase Ava_4013 4998472 - 4997636 - | hypothetical protein Ava_4014 4998677 - 4999396 + | polyphosphate glucokinase TERM 4486 4999592 - 4999545 - T 85 -12.4 -2.96274 | gap 1, opp_overlap 4999546, overlap 4999540 GGTTCTAGAATTATA GCT-ATTGACAGTTGATAGTTGA CTG TCAACTATCAACTATCAACCATC AACTGTCAATCAAGG Ava_4015 5000966 - 4999602 - | hypothetical protein Ava_4016 5001753 - 5001241 - | hypothetical protein hisH 5001812 - 5002447 + | imidazole glycerol phosphate synthase subunit HisH Ava_4018 5002532 - 5003086 + | hypothetical protein petG 5003373 - 5003260 - | cytochrome b6-f complex subunit PetG TERM 4487 5003659 - 5003669 + G 75 -2.4 -5.27779 | opp_overlap 5003659 TGATACTGCTAGCAA TCCC TTT GGGC TTTTTTGGTGTTCAG Ava_4020 5003583 - 5003957 + | cytochrome c, class I TERM 4488 5003986 - 5004020 + T 83 -11.6 -3.00774 | opp_overlap 5003991, overlap 5003991 AGATGCGCGCAGACC TAAAACCCCAATTTCT TCG AGAAATCGGGGTTTTC TGTATCATTAACGTG TERM 4489 5003991 - 5004015 + T 95 -11.5 -4.64591 | opp_overlap 5003991, overlap 5003986 CGCGCAGACCTAAAA CCCCAATTTCT TCG AGAAATCGGGG TTTTCTGTATCATTA TERM 4490 5004015 - 5003991 - T 100 -13.7 -4.2349 | opp_overlap 5003991 5003986 CGCGCAGACCTAAAA CCCCAATTTCT TCG AGAAATCGGGG TTTTCTGTATCATTA Ava_4021 5005704 - 5004136 - | transposase IS4 TERM 4491 5004659 - 5004672 + g 74 -6.7 -4.3129 | opp_overlap 5004659 GTTGCTTGCCAACTA GTTCC GGGG GGAAC TTTTCCTACTAAATC TERM 4492 5005873 - 5005849 - R 72 -9.3 -2.72511 | opp_overlap 5005838 5005851, overlap 5005848 TCCACTGTTCCAAAC TCTTGAGGGGC TTA ACCCCTCAATA ATTCGCCAACAGTAT TERM 4493 5005851 - 5005871 + r 78 -11.2 -2.71011 | opp_overlap 5005849 5005848, overlap 5005838 CACTGTTCCAAACTC TTGAGGGG CTTAA CCCCTCAA TAATTCGCCAACAGT TERM 4494 5005947 - 5006005 + r 88 -10.8 -3.67173 | opp_overlap 5005983, overlap 5005938 5005947 AATCAAGGTTTTAAG CCTCTCTCCGCGTCGGGGAGAGGTACTC TAC GAGAAGCGCTCCGCGCTATGGAGAGGGG TTCTTCCGAATTTAT TERM 4495 5005947 - 5005969 + r 100 -15.6 -2.62184 | overlap 5005938 5005947 AATCAAGGTTTTAAG CCTCTCTCCG CGT CGGGGAGAGG TACTCTACGAGAAGC TERM 4496 5005993 - 5005983 - R 70 -8.2 -3.41602 | opp_overlap 5005947 GGTACTCTACGAGAA GCGC TCC GCGC TATGGAGAGGGGTTC Ava_4022 5007037 - 5006036 - | TPR repeat-containing protein Ava_4023 5007307 - 5008089 + | PpiC-type peptidyl-prolyl cis-trans isomerase Ava_4024 5008950 - 5008114 - | twin-arginine translocation pathway signal TERM 4497 5009737 - 5009706 - H 70 -8.8 -3.00106 | gap 1, opp_overlap 5009705 5009705 5009706, overlap 5009705 TGTAAGTGAAATAAT GCAGGTGGAATTGCA GTT TGCA-CTCCATCTGC CATTTATTTTCTACG Ava_4025 5009815 - 5010612 + | hypothetical protein TERM 4498 5012594 - 5012607 + G 70 -8.1 -3.57462 | opp_overlap 5012593 ACGGTTATCACAATG GCCCA TACA TGGGC TTTGAAGGTGCGGTG Ava_4026 5011312 - 5013075 + | nitrogenase vanadium-iron protein, alpha chain Ava_4027 5013399 - 5014790 + | oxidoreductase/nitrogenase, component 1 Ava_4028 5014923 - 5016452 + | oxidoreductase/nitrogenase, component 1 Ava_4029 5016498 - 5017898 + | oxidoreductase/nitrogenase, component 1 TERM 4499 5017904 - 5017940 + T 86 -9.5 -4.2828 | gap 1, overlap 5017906 TTGGACTTAGATGGA GTGCGATCGCTCTCTA AGAAGG TAGGG-GCGATCGCTC TTTTGGTCAGTGCAG TERM 4500 5017906 - 5017938 + T 86 -10.7 -3.745 | gap 1, overlap 5017904 GGACTTAGATGGAGT GCGATCGCTCTCTA AGAAGG TAGGG-GCGATCGC TCTTTTGGTCAGTGC Ava_4030 5018461 - 5017967 - | hypothetical protein Ava_4031 5018706 - 5018458 - | hypothetical protein Ava_4032 5019701 - 5019057 - | hypothetical protein Ava_4033 5019851 - 5020081 + | hypothetical protein Ava_4034 5020078 - 5020464 + | PilT protein-like TERM 4501 5020554 - 5020528 - T 100 -9.4 -4.91573 | overlap 5020517 5020529 AAAACATAGCAAAAA GTTGAGCGCAGG AAA CCCACGCTCAAG ACTTTTCAAAGCAGA TERM 4502 5020553 - 5020529 - T 95 -12.9 -3.52503 | overlap 5020528 5020517 AAACATAGCAAAAAG TTGAGCGCAGG AAA CCCACGCTCAA GACTTTTCAAAGCAG Ava_4035 5021411 - 5020590 - | nitroreductase Ava_4036 5022485 - 5021811 - | prolyl 4-hydroxylase, alpha subunit TERM 4503 5022538 - 5022523 - g 81 -4 -5.36689 | AAACTAAAAACAAAA CGTAAA TCTG TCTACG ATCGCATTTTGCAAA Ava_4037 5022502 - 5023104 + | TetR family transcriptional regulator Ava_4038 5024293 - 5023139 - | ABC transporter-like Ava_4039 5025042 - 5024290 - | binding-protein dependent transport system inner membrane protein TERM 4504 5025104 - 5025080 - R 95 -8.5 -4.80453 | opp_overlap 5025081, overlap 5025081 GGAGTAGAAAATAAA GCCTCTCTCCT TGT AGGGGAGAGGT TTGGAGAGGGGTTTT TERM 4505 5025081 - 5025103 + r 100 -14.2 -3.5394 | opp_overlap 5025080 5025081 GAGTAGAAAATAAAG CCTCTCTCCT TGT AGGGGAGAGG TTTGGAGAGGGGTTT TERM 4506 5025103 - 5025081 - R 90 -12 -3.47187 | opp_overlap 5025081, overlap 5025080 GAGTAGAAAATAAAG CCTCTCTCCT TGT AGGGGAGAGG TTTGGAGAGGGGTTT Ava_4040 5026014 - 5025133 - | tungstate ABC transporter permease TERM 4507 5025728 - 5025759 + g 74 -4.6 -4.91109 | gap 1 TTGCGTTCGGCTTTG GGTGAA-TTGACA AATAGCA TGTCAACTTCGCC TTTTTCTGCTAAGGC aksA 5027361 - 5026243 - | trans-homoaconitate synthase Ava_4042 5028519 - 5027389 - | molybdate metabolism transcriptional regulator Ava_4043 5029291 - 5028908 - | PilT protein-like Ava_4044 5029524 - 5029288 - | prevent-host-death protein Ava_4045 5029945 - 5029592 - | hypothetical protein Ava_4046 5030841 - 5030014 - | nitrogenase iron protein Ava_4047 5031968 - 5030955 - | cytochrome bd ubiquinol oxidase, subunit II Ava_4048 5033408 - 5031990 - | cytochrome bd ubiquinol oxidase, subunit I Ava_4049 5034904 - 5034197 - | hypothetical protein TERM 4508 5035119 - 5035092 - R 75 -5.6 -4.7339 | opp_overlap 5035093, overlap 5035093 AACAAAGTCGAAAAA GGTTGGGTTG CGCGCGTT CAACCCAACT TACTTTTCAGCCTCA TERM 4509 5035093 - 5035118 + r 78 -9.1 -3.67622 | opp_overlap 5035092 5035093 ACAAAGTCGAAAAAG GTTGGGTTG CGCGCGTT CAACCCAAC TTACTTTTCAGCCTC TERM 4510 5035118 - 5035093 - R 73 -9.1 -3.42407 | opp_overlap 5035093, overlap 5035092 ACAAAGTCGAAAAAG GTTGGGTTG CGCGCGTT CAACCCAAC TTACTTTTCAGCCTC Ava_4050 5035569 - 5035372 - | helix-turn-helix protein, CopG Ava_4051 5036448 - 5037818 + | nitrogenase MoFe cofactor biosynthesis protein NifE TERM 4511 5037819 - 5037801 - f 71 -8.8 -3.12021 | overlap 5037789 AAACAAGTTAGGCAA CCTGCTCC TTG GGAGTAGG AAAAATTAAGGGTGT Ava_4052 5037881 - 5038282 + | dinitrogenase iron-molybdenum cofactor biosynthesis TERM 4512 5038304 - 5038326 + T 100 -13.6 -4.96773 | opp_overlap 5038304 TTTTTAATTATTTAA GCGATACTAA ACT TTAGTATCGC TTTGTTTTTGGTTGG TERM 4513 5038326 - 5038304 - T 100 -13.6 -3.13164 | opp_overlap 5038304 TTTTTAATTATTTAA GCGATACTAA ACT TTAGTATCGC TTTGTTTTTGGTTGG TERM 4514 5039053 - 5039018 - T 100 -2.6 -6.20267 | opp_overlap 5039034, overlap 5039019 5039035 TTAAAAATAAAAAAA TTAGGGAATAGGAA GCAGGAAT TCCCAATTCCCTAT GTAACAAAAAACCAA Ava_4054 5040256 - 5039282 - | nitrogenase iron protein subunit NifH Ava_4055 5041677 - 5040544 - | molybdate metabolism transcriptional regulator Ava_4056 5041826 - 5042110 + | hypothetical protein TERM 4515 5042299 - 5042243 - T 70 -6.8 -4.17296 | opp_overlap 5042248, overlap 5042237 CCTCACACACACAAA GTTTGTAGTAAGCACTTTAGTGCTTA GAAAT TTAGGAATAAAGTCCTTACTACCAAC AGATTCAACTGCAAA Ava_4057 5043093 - 5042317 - | hypothetical protein TERM 4516 5042795 - 5042782 - G 75 -3.1 -5.19212 | AGCACCACCAAAAAA GAGAT TTTT ACCTC TGTCATCTGGGCCAG Ava_4058 5044119 - 5043175 - | hypothetical protein Ava_4059 5044434 - 5046179 + | S-layer region-like TERM 4517 5046279 - 5046244 - f 76 -7.7 -4.03234 | opp_overlap 5046255, overlap 5046247 GTTGCGCCAGATAAA TGATGTAGAGACGTT TCATGC AACGTCTCTACAGTA AAGAATAAAGTGCAT TERM 4518 5046276 - 5046247 - f 100 -13.8 -3.06418 | opp_overlap 5046255, overlap 5046244 GCGCCAGATAAATGA TGTAGAGACGTT TCATGC AACGTCTCTACA GTAAAGAATAAAGTG TERM 4519 5046737 - 5046758 + G 76 -8.1 -4.08216 | opp_overlap 5046710 5046707 ACAATATTATTCATG GAGTTACTA GCAA TGGTAACTC TTTTCCAGAACATAA Ava_4060 5046694 - 5048577 + | peptidase S8 and S53, subtilisin, kexin, sedolisin TERM 4520 5048776 - 5048786 + T 78 -4 -5.40474 | overlap 5048777 TGACTCCTGAATTCT GTTT GAT AAAC TTTTTTTACCAAAAT TERM 4521 5048865 - 5048851 - T 73 -2.2 -5.31275 | opp_overlap 5048856 TTTTAGTATAAAAAA TTACTT TTA AAATAA AGTTGATTACATATC Ava_4061 5049688 - 5048945 - | hypothetical protein Ava_4062 5050733 - 5049777 - | molybdenum ABC transporter periplasmic-binding protein TERM 4522 5050824 - 5050782 - H 73 -6.4 -4.33105 | opp_overlap 5050796 5050802, overlap 5050785 TAAGCATTAGGAAAA CAATACCAAAAAAGTTGGAA TAT TACCAATATTTTTGGTAATG CAAGATATTCTGACC TERM 4523 5050821 - 5050785 - H 73 -6.7 -4.27443 | opp_overlap 5050796 5050802, overlap 5050782 GCATTAGGAAAACAA TACCAAAAAAGTTGGAA TAT TACCAATATTTTTGGTA ATGCAAGATATTCTG Ava_4063 5051177 - 5052730 + | cytochrome P450 Ava_4064 5053707 - 5052958 - | hypothetical protein trmU 5054098 - 5055156 + | tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase TERM 4524 5055260 - 5055281 + F 100 -14.5 -4.88405 | opp_overlap 5055264 CCAGATCATTTTGTA GAGACGCGA TTAA TCGCGTCTC TTTTCTTTAAAAGTT Ava_4066 5055470 - 5056540 + | ABC transporter, substrate-binding protein, aliphatic sulphonates Ava_4067 5056725 - 5058434 + | putative oxidoreductase TERM 4525 5058468 - 5058504 + F 73 -9.3 -2.91912 | opp_overlap 5058469 ATTCGACGGAACCTA ACCCCAACCCCTTCCCT ACA AGGGAAGGGGCTGGAAA TCTATAACTGAGTAC TERM 4526 5058503 - 5058469 - f 100 -19.4 -3.19192 | opp_overlap 5058468 TTCGACGGAACCTAA CCCCAACCCCTTCCCT ACA AGGGAAGGGGCTGGAA ATCTATAACTGAGTA TERM 4527 5058540 - 5058562 + F 100 -19.2 -3.53761 | overlap 5058528 AATCAGGGTTTTAAG CCTCTCCCCG ATG CGGGGAGAGG TTTGGAGAGGGGTTC Ava_4068 5058663 - 5059187 + | GCN5-related N-acetyltransferase Ava_4069 5059217 - 5059912 + | HAD family hydrolase Ava_4070 5059940 - 5060722 + | MerR family transcriptional regulator Ava_4071 5060738 - 5061199 + | GCN5-related N-acetyltransferase Ava_4072 5061216 - 5061458 + | 4Fe-4S ferredoxin, iron-sulfur binding Ava_4073 5061519 - 5062496 + | HEAT repeat-containing PBS lyase TERM 4528 5062678 - 5062692 + G 72 -10 -2.79574 | overlap 5062675 5062691 TTAGTTTGGGAATGG TGCGGA ATC TCCGCA TAGTTGATGACTATG TERM 4529 5062819 - 5062845 + G 89 -10.2 -3.99324 | opp_overlap 5062819 TTCAAATTTGTACAA TTCCTGGGGTGA AAA TCACTCTGGGAA TTTCTAGTGGTAAAG Ava_4074 5062575 - 5063585 + | hypothetical protein Ava_4075 5064486 - 5063587 - | 6-phosphogluconate dehydrogenase, NAD-binding TERM 4530 5063653 - 5063666 + g 74 -6.7 -4.40181 | GATGTCTTTCAATCG GCGAT CGCG ATCGC TTTCTTCTGGTGTTT Ava_4076 5065732 - 5064653 - | homoserine O-acetyltransferase Ava_4077 5067080 - 5065776 - | O-acetylhomoserine/O-acetylserine sulfhydrylase Ava_4078 5068466 - 5067276 - | YeeE/YedE TERM 4531 5068540 - 5068517 - R 91 -11.8 -4.35742 | opp_overlap 5068517 AGGTAAGCAGGAAAA CCCAACACCT GTTT AAGTGTTGGG TTATTTCTTGAAGCT TERM 4532 5068517 - 5068540 + r 86 -9.6 -4.20768 | opp_overlap 5068517 AGGTAAGCAGGAAAA CCCAACACCT GTTT AAGTGTTGGG TTATTTCTTGAAGCT Ava_4079 5069845 - 5068880 - | rhodanese-like protein TERM 4533 5070653 - 5070667 + G 71 -4.2 -4.82901 | overlap 5070655 TTGGTTAGATGATTC TGGGCG TAT TGCCTA TTTTTCTGGCAAAGA Ava_4080 5070549 - 5070959 + | hypothetical protein Ava_4081 5070968 - 5071636 + | dienelactone hydrolase Ava_4082 5071895 - 5072464 + | pentapeptide repeat-containing protein TERM 4534 5072568 - 5072541 - f 72 -7.6 -3.74347 | gap 1, overlap 5072542 CCCATAAAGCGCAAA GTCGGAGCGGCGG CTT CCGCCGTTCCC-C GAAGGGGTTGCCGCA TERM 4535 5072570 - 5072542 - f 73 -9.6 -2.84126 | gap 2, overlap 5072541 CCATAAAGCGCAAAG TCGGAG--CGGCGG CTT CCGCCGTTCCCCGA AGGGGTTGCCGCAGG TERM 4536 5072792 - 5072775 - f 79 -8.5 -4.04474 | opp_overlap 5072774 AGACTTTTATACAAA GCAGAAT ATTG ATTCTGC CCTTTGGGAACGCTT TERM 4537 5075336 - 5075306 - g 74 -4.6 -4.82901 | overlap 5075312 TTGGGTGCAGAAAAA GCAGAAGTTGGTAC AAT GCACCAACCACCTC GGAAAAAATCGCGAT TERM 4538 5075330 - 5075312 - g 81 -9.6 -3.78785 | overlap 5075306 GCAGAAAAAGCAGAA GTTGGTAC AAT GCACCAAC CACCTCGGAAAAAAT Ava_4083 5072930 - 5075845 + | ATPase, E1-E2 type TERM 4539 5076131 - 5076075 - T 80 -9.7 -3.49864 | opp_overlap 5076080 5076082, overlap 5076077 5076079 5076082 5076093 GTTATAGAAGAAAAT GAGAGTATCAAGCAAAAAGTTGTCTGT TAT AAAGACAACTTTTTGCTTGATGTTTTT TATTTAGACAAGGTT TERM 4540 5076129 - 5076077 - T 89 -12.3 -3.31191 | opp_overlap 5076080 5076082, overlap 5076075 5076079 5076082 5076093 TATAGAAGAAAATGA GAGTATCAAGCAAAAAGTTGTCTGT TAT AAAGACAACTTTTTGCTTGATGTTT TTTATTTAGACAAGG TERM 4541 5076127 - 5076079 - T 100 -14.9 -3.2024 | opp_overlap 5076080 5076082, overlap 5076077 5076075 5076082 5076093 TAGAAGAAAATGAGA GTATCAAGCAAAAAGTTGTCTGT TAT AAAGACAACTTTTTGCTTGATGT TTTTTATTTAGACAA TERM 4542 5076080 - 5076126 + T 100 -20.6 -5.63517 | opp_overlap 5076079 5076077 5076075 5076082 5076093, overlap 5076082 AGAAGAAAATGAGAG TATCAAGCAAAAAGTTGTCTGT TAT AAAGACAACTTTTTGCTTGATG TTTTTTATTTAGACA TERM 4543 5076124 - 5076082 - T 100 -21 -2.77512 | opp_overlap 5076080 5076082, overlap 5076079 5076077 5076075 5076093 AAGAAAATGAGAGTA TCAAGCAAAAAGTTGTCTGT TAT AAAGACAACTTTTTGCTTGA TGTTTTTTATTTAGA TERM 4544 5076082 - 5076124 + T 100 -21 -4.45696 | opp_overlap 5076082 5076079 5076077 5076075 5076093, overlap 5076080 AAGAAAATGAGAGTA TCAAGCAAAAAGTTGTCTGT TAT AAAGACAACTTTTTGCTTGA TGTTTTTTATTTAGA TERM 4545 5076113 - 5076093 - T 85 -6.9 -4.90869 | opp_overlap 5076082 5076080, overlap 5076082 5076079 5076077 5076075 AGTATCAAGCAAAAA GTTGTCTGT TAT AAAGACAAC TTTTTGCTTGATGTT Ava_4084 5076935 - 5076330 - | PepSY-associated TM helix TERM 4546 5076894 - 5076878 - G 91 -7.9 -4.80178 | GAGGAATGAATAAAA TCGGCGC AAT GCGACGA TGGAGTTTACGAAAT Ava_4085 5077184 - 5077861 + | two component transcriptional regulator TERM 4547 5078007 - 5078021 + G 82 -5 -5.33848 | ATGGGACTGTCATCG GTGGTA GTG TATCAC TTTTTTGCTTATAGT Ava_4086 5077980 - 5079218 + | histidine kinase TERM 4548 5080147 - 5080176 + G 70 -7.9 -3.64912 | TAACTCGTCGCATCC CTGTAGTGGAAAC ACTG GGTTCTACTACGG TTCTGTGTGTCGATA TERM 4549 5081207 - 5081193 - g 78 -4.3 -5.11033 | GACAACCTGAAAAAA GGTAT GGCTT ATACC TTGGCGGTTCATATC TERM 4550 5081682 - 5081695 + G 78 -2.3 -5.54907 | TATTTTCCTGTATTG CGGCA TCTA TTCCG TTTTTCTTTTCTGCA Ava_4087 5079219 - 5081822 + | ATPase, E1-E2 type Ava_4088 5083222 - 5082056 - | hypothetical protein Ava_4090 5084332 - 5083766 - | cold-shock DNA-binding protein family protein TERM 4551 5085467 - 5085514 + H 100 -13.8 -5.46706 | gap 1, opp_overlap 5085467 AGGTTAGGTAACAAA TTTGAGAAAGTTGTGAGGAAAGT TAA ACTA-CTTCACAACTTTCTCGAA TTTTTCTTTTAGCAT TERM 4552 5085514 - 5085467 - H 86 -9.4 -4.20783 | gap 1, opp_overlap 5085467 AGGTTAGGTAACAAA TTTGAGAAAGTTGTGAGGAAAGT TAA ACTA-CTTCACAACTTTCTCGAA TTTTTCTTTTAGCAT Ava_4093 5085609 - 5086040 + | pentapeptide repeat-containing protein TERM 4553 5087168 - 5087178 + G 82 -3.2 -5.52986 | GAAGAAGCATTGAAA GTTG GCG CAGC TTTTTTTGATCGGGT Ava_4094 5086055 - 5087233 + | peptidase M20D, amidohydrolase TERM 4554 5087529 - 5087491 - f 76 -10.5 -2.59191 | opp_overlap 5087490 5087504, overlap 5087490 5087514 TCATATCTTCACAAC TTTTGCCTATATACTAC AAGAA GTAGTATATAGGCTACA CTAAATTTATTCGAT Ava_4095 5087557 - 5088561 + | metallophosphoesterase Ava_4096 5088991 - 5089704 + | two component LuxR family transcriptional regulator Ava_4097 5091094 - 5089916 - | hypothetical protein TERM 4555 5091004 - 5091015 + g 95 -3 -6.15828 | opp_overlap 5090999 5090998, overlap 5090999 AGGAAAAAGCTTGGC TTTG CTGC CAAA TTTTTTTTTGCTCAG Ava_4098 5092311 - 5091103 - | hypothetical protein TERM 4556 5091145 - 5091161 + g 70 -9.5 -2.77235 | opp_overlap 5091148, overlap 5091141 ATAGTAAGTTTGTAA CCATTCT TCG AGAATGG TGCTTACATAGTTGA TERM 4557 5092441 - 5092429 - H 72 -7.7 -3.72374 | overlap 5092427 TGCTAGGAAGAAATA TTGGC TTT GCCAA AAAAATAAGTGGGAC TERM 4558 5093955 - 5093945 - g 76 -6.8 -4.4874 | opp_overlap 5093944 CTTAAAAATCGAAAA TCGC ACA GCGA AATTTGATCTGGCGC TERM 4559 5096712 - 5096726 + G 75 -8.6 -3.76402 | GATGTCTTGTTAACT GCTTTG GTA CAAAGC TTTGCTCAATGGACT TERM 4560 5097698 - 5097684 - g 76 -2.8 -5.31855 | overlap 5097678 GAGCAACAAGAAAAA CTGACA GCT TTTCAG GAAGCAGATAGAAAC TERM 4561 5098761 - 5098749 - g 71 -3.3 -4.946 | overlap 5098742 ATTAAAGACCAAAAA CTGGC AGC GACAG CAATTAATAAATTGC Ava_4099 5092701 - 5098802 + | non-ribosomal peptide synthase TERM 4562 5099378 - 5099391 + G 71 -3.1 -5.03994 | ACTCTCCCGTTTATC CCATG AAGA TATGG TTTTTCTGTGTGAAA TERM 4563 5099445 - 5099407 - g 100 -13.4 -3.53012 | gap 1, opp_overlap 5099415, overlap 5099410 TTTTTCTGTGTGAAA GC-ATCAGAGATTGGCG GAGAAA CACCAATCTCTGATAGC CGTAAAGTGTTTGAA TERM 4564 5099441 - 5099410 - g 100 -13.9 -2.90496 | opp_overlap 5099415, overlap 5099407 TTCTGTGTGAAAGCA TCAGAGATTGGCG GAGAAA CACCAATCTCTGA TAGCCGTAAAGTGTT Ava_4100 5098966 - 5099988 + | SyrP protein, putative TERM 4565 5100023 - 5100055 + F 100 -15.1 -5.29846 | ACCCTACTTATTATG CTCCCAAATGCTTAT TCA GTAAGTATTTGGGAG TTTTTATTTAAAATT TERM 4566 5103219 - 5103233 + G 70 -2.8 -5.05782 | overlap 5103221 AATGTCCATCCTATA GGTATC AAA GATAGC TTTTTTGAACTCGGT TERM 4567 5103371 - 5103351 - g 71 -4 -4.78149 | CCCACAATCGAAAAA TTGGCTAA TCTGC TTCGCCAA ACATCAGAAATCTCA Ava_4101 5100210 - 5104247 + | amino acid adenylation TERM 4568 5104888 - 5104872 - g 71 -3 -5.00884 | opp_overlap 5104884, overlap 5104873 ATCGCGCGGAAAAAA CTCCTT GGTTG AAGGAA GCATCTTCCGGTTTG Ava_4102 5104259 - 5105575 + | major facilitator transporter TERM 4569 5106100 - 5106090 - g 71 -4 -4.84642 | CGCAAACCAATAAAA TTTG ATC CAAA ATCCAAAAAATTGAC TERM 4570 5106895 - 5106885 - g 70 -5.4 -4.48987 | GTTTTAGAAGCAAAA GCTA ATT TAGC CCTAGCTTATGTGCG TERM 4571 5107130 - 5107120 - g 71 -3.2 -5.03145 | GAACTGTGGAAAAAA TCGG TGT CCAA ATAGGTAAGAGAAAT Ava_4103 5106063 - 5107289 + | heterocyst specific ABC-transporter, membrane fusion protein DevB TERM 4572 5108013 - 5108002 - g 78 -4.4 -5.19212 | opp_overlap 5108002 AGTATCATCAAAAAA GTCT CACA AGAC TTACCTCAAGAACTA TERM 4573 5108438 - 5108458 + G 100 -9.7 -4.68424 | opp_overlap 5108437 5108435, overlap 5108452 CGATGAATAAACTAC GTTCTGCTG ATC CAGCCGAAC TTTTTGGCTAAATTC Ava_4104 5107312 - 5108469 + | DevC protein Ava_4105 5108865 - 5109560 + | ABC transporter-like Ava_4106 5109651 - 5111141 + | Serine/threonine protein kinase TERM 4574 5111246 - 5111199 - f 100 -11.6 -5.1101 | opp_overlap 5111200, overlap 5111200 TTACCAGCCAAAAAA CCACGGGTAAATACAGATAA GTCTATGT TTATCTGTATTTACCTGTGT TTCTTTCTAGATGTA TERM 4575 5111200 - 5111245 + F 100 -18.7 -4.58085 | opp_overlap 5111199 5111200 TACCAGCCAAAAAAC CACGGGTAAATACAGATAAGT CTAT GTTTATCTGTATTTACCTGTG TTTCTTTCTAGATGT TERM 4576 5111245 - 5111200 - f 100 -15.1 -3.65883 | opp_overlap 5111200, overlap 5111199 TACCAGCCAAAAAAC CACGGGTAAATACAGATAA GTCTATGT TTATCTGTATTTACCTGTG TTTCTTTCTAGATGT TERM 4577 5113817 - 5113806 - g 75 -2.2 -5.29782 | CACAGGTAGAAAAAA CAGT CAAT ACCG AAGCAGTTGCAACTT TERM 4578 5114903 - 5114888 - g 72 -7.6 -3.76224 | TTGGCAGTGATTAAA GGTTCA GCCG TGAACC AAGACGGACGCAGCA TERM 4579 5116910 - 5116924 + G 73 -8.6 -3.68222 | opp_overlap 5116910 5116909 TTGCGTACTCATAAT TTGACC AAA GGTCAA TTCTTGCCATTGCAA Ava_4108 5112020 - 5116990 + | Beta-ketoacyl synthase TERM 4580 5117194 - 5117229 + F 79 -10.6 -3.14132 | opp_overlap 5117219 TGGGTGGAGCGATAG CGGAACCCAACA AAGTCTTGAGAA TGTTGGGTTCCG TTCCTCCACCCAACC TERM 4581 5117350 - 5117330 - f 76 -9.8 -2.9914 | CATTCTTGAGACACA GGGTTGAA CATTT TTCAACCC CTACCTACATATTTA TERM 4582 5117639 - 5117628 - f 74 -3 -5.35354 | opp_overlap 5117628 CACACAATCAAAAAA TATG AACA CATA TACTATTGACAATCA TERM 4583 5120507 - 5120518 + G 70 -5.8 -4.39568 | TTATGACGCTGTTAT CTGC ATAC GCAG TTTTACTCTATCGCT Ava_4109 5117629 - 5122989 + | amino acid adenylation Ava_4110 5125300 - 5123111 - | peptidase C14, caspase catalytic subunit p20 TERM 4584 5123620 - 5123653 + g 100 -3.9 -6.13503 | AGGTAGTAGAGGGAA TTTCTGTCACATCAT CAAG ATGGTGAGATGGGAA TTTTTTTTGTTGCTC TERM 4585 5124906 - 5124920 + g 70 -3.5 -4.85918 | overlap 5124898 5124910 5124915 TTTTGCACAGGTAAT CCTGT ATCTG GCAGG TTTTCTTGTCTGGTA TERM 4586 5125660 - 5125614 - H 90 -8.9 -4.61566 | gap 1, overlap 5125616 5125620 TGTTAAAGGATAAAA CATCAACGGAAGGGTCTAGTTG CGTT CAACCAGACCCTTCAGCC-ATA ACTGCCTATTCTATA TERM 4587 5125659 - 5125616 - H 83 -9.6 -3.9151 | overlap 5125614 5125620 TTAAAGGATAAAACA TCAACGGAAGGGTCTAGTTG CGTT CAACCAGACCCTTCAGCCAT AACTGCCTATTCTAT TERM 4588 5125655 - 5125620 - H 100 -17 -3.58428 | overlap 5125616 5125614 AGGATAAAACATCAA CGGAAGGGTCTAGTTG CGTT CAACCAGACCCTTCAG CCATAACTGCCTATT Ava_4111 5126038 - 5126640 + | PBP family phospholipid-binding protein Ava_4112 5126663 - 5126899 + | hypothetical protein TERM 4589 5126895 - 5126912 + F 71 -7.1 -3.96216 | AGATAAATATTGACG TTTGACT AAAT AGTCAAA TTGTTTAAGTAAGGA Ava_4113 5126937 - 5128100 + | hypothetical protein TERM 4590 5128209 - 5128176 - f 70 -5.4 -4.43272 | gap 2, opp_overlap 5128176 5128183, overlap 5128183 5128184 ATTCAAAATTCAAAA TTAAAGACCCCACGGA TAAA TCCG-GGGG-CTTGAA TTAATGTTGTTTCAC TERM 4591 5128203 - 5128183 - f 78 -9 -3.70102 | gap 1, opp_overlap 5128176 5128183, overlap 5128176 5128184 ATTCAAAATTAAAGA CCCCACGGA TAAA TCCG-GGGG CTTGAATTAATGTTG TERM 4592 5128203 - 5128184 - f 73 -9.2 -2.80977 | opp_overlap 5128183 5128176, overlap 5128183 5128176 TTCAAAATTAAAGAC CCCACGGA TAAA TCCGGGGG CTTGAATTAATGTTG TERM 4593 5128434 - 5128383 - f 95 -11.6 -4.55295 | gap 1, opp_overlap 5128394, overlap 5128387 5128398 TTCGCCATAAATAAA TTTAGCGCGAAG-TCAGAGCGCCGG TCT CCGGCGCTCTGAACTTCGTAAGAGA GGGGCTTGTATCCTC TERM 4594 5128430 - 5128387 - f 100 -16.8 -2.82776 | gap 1, opp_overlap 5128394, overlap 5128383 5128398 CCATAAATAAATTTA GCGCGAAG-TCAGAGCGCCGG TCT CCGGCGCTCTGAACTTCGTAA GAGAGGGGCTTGTAT TERM 4595 5128394 - 5128423 + F 100 -18.7 -3.14132 | gap 1, opp_overlap 5128387 5128383 5128398 TAAATTTAGCGCGAA G-TCAGAGCGCCGG TCT CCGGCGCTCTGAAC TTCGTAAGAGAGGGG TERM 4596 5128418 - 5128398 - f 100 -18.3 -2.53263 | opp_overlap 5128394, overlap 5128387 5128383 TTTAGCGCGAAGTCA GAGCGCCGG TCT CCGGCGCTC TGAACTTCGTAAGAG TERM 4597 5128547 - 5128575 + F 79 -8.1 -4.09511 | opp_overlap 5128546 5128547 TTGTTGGAAGAAAAT CTGACAATCGGCG ATC TGCGGATAGTCAG TTTTGGGAAAATATT Ava_4114 5128608 - 5130233 + | thiamine pyrophosphate enzyme Ava_4115 5130291 - 5131388 + | glutamate dehydrogenase (NADP) Ava_4117 5132364 - 5131960 - | hypothetical protein Ava_4118 5132908 - 5132480 - | hypothetical protein Ava_4119 5134168 - 5133095 - | hypothetical protein TERM 4598 5133235 - 5133253 + g 71 -3.2 -5.07567 | ATGGTTTGAATAAGT TTTGACAA TAC TTATCAAA TTTTTTACCATCTAA TERM 4599 5133402 - 5133428 + g 79 -3 -5.26316 | overlap 5133403 GCAATGTTATACTTT TCCTCTAAATCT ATA AAATCTAGAGGG TTTTTTCTCAAATCG Ava_4120 5134796 - 5135077 + | hypothetical protein Ava_4121 5136140 - 5135070 - | photosystem II reaction centre protein PsbA/D1 Ava_4122 5136862 - 5137644 + | hypothetical protein Ava_4123 5137647 - 5138579 + | ribose-phosphate pyrophosphokinase Ava_4124 5138592 - 5139254 + | phosphoribosyltransferase TERM 4600 5139273 - 5139296 + T 91 -11.8 -3.81414 | gap 1 GAGGTTCGTTGACAC TCCATCGCCGT AGA ACGGCGA-GGA TTCTTGGTTCACAGT Ava_4125 5140099 - 5139305 - | transposase TERM 4601 5140221 - 5140211 - g 70 -5.4 -4.50241 | opp_overlap 5140211, overlap 5140201 5140205 AAATATGAACCAAAA CTTG CCT CAAG ATTTAGACAGAGAAA TERM 4602 5140486 - 5140470 - g 70 -3.6 -4.89063 | CCACCGAAAAAGAAA CCAGGT GGGCA ACCAGG ACATCAAGGTAAAAC TERM 4603 5140621 - 5140608 - g 71 -2.3 -5.09245 | overlap 5140610 GTAAAAGTAGAAAAA CACGC GGTA GCGCA ACTAGTAGAATGTCC Ava_4126 5140200 - 5141672 + | transposase IS66 Ava_4127 5142101 - 5141655 - | transposase TERM 4604 5142137 - 5142091 - G 100 -27 -4.00042 | opp_overlap 5142093 5142096, overlap 5142093 5142105 TTTGGTATCAAATAA TATAATAGCATAAAGCCGCCCT TCT AGGGCGGCTTTATGCTATTATT TTCGGTCATCTGAGC TERM 4605 5142135 - 5142093 - G 100 -29.6 -3.59252 | opp_overlap 5142093 5142096, overlap 5142091 5142105 TGGTATCAAATAATA TAATAGCATAAAGCCGCCCT TCT AGGGCGGCTTTATGCTATTA TTTTCGGTCATCTGA TERM 4606 5142093 - 5142135 + g 100 -29.6 -4.22652 | opp_overlap 5142091 5142093 5142105, overlap 5142096 TGGTATCAAATAATA TAATAGCATAAAGCCGCCCT TCT AGGGCGGCTTTATGCTATTA TTTTCGGTCATCTGA TERM 4607 5142096 - 5142132 + g 100 -26.9 -4.22883 | opp_overlap 5142093 5142091 5142105, overlap 5142093 TATCAAATAATATAA TAGCATAAAGCCGCCCT TCT AGGGCGGCTTTATGCTA TTATTTTCGGTCATC TERM 4608 5142123 - 5142105 - H 100 -16 -4.09173 | opp_overlap 5142096 5142093, overlap 5142093 5142091 ATATAATAGCATAAA GCCGCCCT TCT AGGGCGGC TTTATGCTATTATTT Ava_4128 5142171 - 5142503 + | hypothetical protein Ava_4129 5142745 - 5143272 + | hypothetical protein TERM 4609 5143336 - 5143367 + F 83 -6 -5.07275 | ACACTCTTAGGATAA TGGAGAATGAGTAA TGGA TAATTCATTCTTCA TTTTTATGTATCTGA Ava_4130 5143696 - 5145288 + | alkaline phosphatase TERM 4610 5145389 - 5145347 - T 100 -13.6 -3.30474 | opp_overlap 5145344, overlap 5145350 5145351 TTGCATAACTACTAA TAAGGGCTGTTAACTGTTGA ATG TCAACGGTCAACAGCCATCA AGATTGGATTATGTA TERM 4611 5145386 - 5145350 - T 100 -13.1 -3.78793 | opp_overlap 5145344, overlap 5145347 5145351 CATAACTACTAATAA GGGCTGTTAACTGTTGA ATG TCAACGGTCAACAGCCA TCAAGATTGGATTAT TERM 4612 5145385 - 5145351 - T 100 -16.6 -2.86553 | opp_overlap 5145344, overlap 5145350 5145347 ATAACTACTAATAAG GGCTGTTAACTGTTGA ATG TCAACGGTCAACAGCC ATCAAGATTGGATTA Ava_4131 5148009 - 5145463 - | filamentous haemagglutinin-like TERM 4613 5148090 - 5148052 - R 81 -6.9 -4.68724 | gap 2 TTATGTAATATAAAA TCCC-CTTGCAAACA-TCA ATT CGACTGTTAGCAAGTGGGA CAAATGAGATTGATT Ava_4132 5149762 - 5148212 - | hypothetical protein Ava_4133 5151065 - 5149845 - | hypothetical protein TERM 4614 5150814 - 5150843 + g 71 -8.7 -3.35679 | CCCTTCAGTCATCTC GACATGGATGTTG ACCA CAACATCTATATC TTGTAAGTAAGCAGA Ava_4134 5151640 - 5152359 + | hypothetical protein TERM 4615 5153558 - 5153582 + G 75 -5.8 -4.67982 | CAGCGCAAACAGTCT TTACCAGGAT GGCCG ATTCTGGTGA TTTTATTGAGTACAA TERM 4616 5153787 - 5153774 - g 95 -8.1 -5.09204 | ACATTGGAAGAAAAA GTGCG CGAT CGCAC CCAAGAGTTAGAAAC Ava_4135 5152475 - 5155243 + | periplasmic sensor hybrid histidine kinase TERM 4617 5155669 - 5155659 - g 86 -3.2 -5.64421 | ACTGCAAATAAAAAA CCAA GAA CTGG ATAAATTAGTAGAAG Ava_4136 5155240 - 5156562 + | response regulator receiver Signal transduction histidine kinase Ava_4137 5156632 - 5159238 + | TPR repeat-containing protein Ava_4138 5160117 - 5159350 - | ABC transporter-like Ava_4139 5161048 - 5160221 - | binding-protein dependent transport system inner membrane protein Ava_4140 5163398 - 5161596 - | S-layer region-like TERM 4618 5163374 - 5163356 - G 78 -5.9 -4.85177 | AAAGCACATTAAAAA GGGCTGG GACAA CTAGCCC ACAATTCCATAAAAT Ava_4141 5164114 - 5164935 + | putative methyltransferase TERM 4619 5165280 - 5165310 + G 73 -8.2 -3.64984 | opp_overlap 5165286 ACACAAAAACGCAAT GGGAAACTTGCTCA TTT TGAGCCAGTCACCC TCTTTTCAGCGCTGT TERM 4620 5165336 - 5165347 + G 71 -4.4 -4.88918 | GCTGTCCTCTGTCAC CCAA AACA TTGG TTTTATTTCCACTGC Ava_4142 5165061 - 5166425 + | monooxygenase-like TERM 4621 5166701 - 5166684 - f 86 -9.9 -4.28254 | CTTGAAGATCCAAAA TCAGGAC TACA GTCCTGA CTACAAACAAAGGAG Ava_4143 5166886 - 5168415 + | amidohydrolase 2 TERM 4622 5168462 - 5168432 - f 82 -11.2 -3.35934 | TCAGATAGTTGACAA GATCCCTGACTTCT TGA AGAAGTTGGGGATC TGACCACCACACAAA TERM 4623 5168602 - 5168566 - g 79 -7.9 -4.329 | overlap 5168568 GAAGAGACCAACAAA CCCGCACCCCTCGTA TTGTTTC TACATGGGGCGCGCG ATCGCGGTACAGATA Ava_4144 5168497 - 5169150 + | phospholipase/carboxylesterase TERM 4624 5169781 - 5169763 - g 73 -8.2 -3.61239 | GAGATTGAGAGAGAA CTTTTGCC CCT AGCAAAAG AAGAAAGTCTGGGTG Ava_4145 5169172 - 5170170 + | aldo/keto reductase TERM 4625 5170372 - 5170360 - g 75 -5.5 -4.82901 | CTCTGGCGATAAAAA CGAAG GTT CTCCG CATGGGGTATCAAAG Ava_4146 5170224 - 5171264 + | ABC transporter, substrate-binding protein, aliphatic sulphonates TERM 4626 5171299 - 5171323 + F 72 -8.5 -3.55815 | opp_overlap 5171300 5171321, overlap 5171300 AAAACCCCTCTCCAA ACCTCTCCCCT GCA AGGAGAGAGGC TTTAAAACCCTATTT TERM 4627 5171300 - 5171322 + F 83 -12 -2.73007 | opp_overlap 5171300 5171321, overlap 5171299 AAACCCCTCTCCAAA CCTCTCCCCT GCA AGGAGAGAGG CTTTAAAACCCTATT TERM 4628 5171322 - 5171300 - f 100 -14.2 -3.5394 | opp_overlap 5171300 5171299, overlap 5171321 AAACCCCTCTCCAAA CCTCTCCCCT GCA AGGAGAGAGG CTTTAAAACCCTATT TERM 4629 5171389 - 5171418 + F 91 -11.5 -4.07568 | gap 1, opp_overlap 5171389 5171390, overlap 5171370 5171369 5171389 GCGTCGGAGCGAAAA G-TCTGAGCGGAGG TTT CCTCCGATCAGAAC TTTTCAAGAGAGAGG TERM 4630 5171417 - 5171389 - f 91 -11.7 -4.18018 | opp_overlap 5171370 5171369 5171389 5171389, overlap 5171390 GCGTCGGAGCGAAAA GTCTGAGCGGAGG TTT CCTCCGATCAGAA CTTTTCAAGAGAGAG TERM 4631 5171389 - 5171417 + F 83 -11.7 -3.04398 | opp_overlap 5171389 5171390, overlap 5171370 5171369 5171389 GCGTCGGAGCGAAAA GTCTGAGCGGAGG TTT CCTCCGATCAGAA CTTTTCAAGAGAGAG TERM 4632 5171416 - 5171390 - f 100 -15.2 -3.10597 | opp_overlap 5171370 5171369 5171389 5171389, overlap 5171389 CGTCGGAGCGAAAAG TCTGAGCGGAGG TTT CCTCCGATCAGA ACTTTTCAAGAGAGA TERM 4633 5171647 - 5171658 + F 89 -5.8 -5.28481 | ATTGACTATTGACCA CCCT CAGA AGGG TTTTTTGCTTCAGTG TERM 4634 5171711 - 5171732 + F 100 -7.9 -5.45802 | overlap 5171712 TTAGTTTAACGCCAC CGGGCGGCT GAGT AGCCGTCCA TTTTTATTTTACAGA TERM 4635 5171712 - 5171731 + F 91 -11.4 -3.86397 | overlap 5171711 TAGTTTAACGCCACC GGGCGGCT GAGT AGCCGTCC ATTTTTATTTTACAG TERM 4636 5173013 - 5173035 + G 79 -8.4 -4.13014 | opp_overlap 5173013, overlap 5173030 5173034 TCACCATCCAACCAA GCCAGCGAGT GGG ACTGGTTGGC TTTTCCGGCTCTGGA Ava_4147 5171854 - 5173755 + | ABC transporter-like TERM 4637 5173905 - 5173848 - f 100 -8.8 -5.13722 | gap 2, opp_overlap 5173862, overlap 5173854 5173856 5173862 TGTACTAAAATAAAA TAGAACCATCAAAATGGAGTAGCTTTGC GATC GCAAGGCTACTCCATTTTGA--GTTAAA AATGACTTTGAACCA TERM 4638 5173900 - 5173854 - f 100 -19.1 -3.07871 | gap 1, opp_overlap 5173862, overlap 5173848 5173856 5173862 AAAATAAAATAGAAC CATCAAAATGGAGTAGCTTTGC GATC GCAAGGCTACTCCATTTTGA-G TTAAAAATGACTTTG TERM 4639 5173899 - 5173856 - f 100 -22.8 -3.05614 | opp_overlap 5173862, overlap 5173854 5173848 5173862 AATAAAATAGAACCA TCAAAATGGAGTAGCTTTGC GATC GCAAGGCTACTCCATTTTGA GTTAAAAATGACTTT TERM 4640 5173893 - 5173862 - f 100 -16 -4.38129 | opp_overlap 5173862, overlap 5173856 5173854 5173848 ATAGAACCATCAAAA TGGAGTAGCTTTGC GATC GCAAGGCTACTCCA TTTTGAGTTAAAAAT TERM 4641 5173862 - 5173893 + F 100 -18.2 -4.27584 | opp_overlap 5173862 5173856 5173854 5173848 ATAGAACCATCAAAA TGGAGTAGCTTTGC GATC GCAAGGCTACTCCA TTTTGAGTTAAAAAT Ava_4148 5174066 - 5175046 + | ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like TERM 4642 5175903 - 5175892 - g 79 -3 -5.30348 | ATTGAATAATAAAAA GTTA CATT TAAC TACTACTTTGTCAAC Ava_4149 5175056 - 5176831 + | diguanylate cyclase Ava_4150 5177726 - 5176941 - | hypothetical protein Ava_4151 5178579 - 5177752 - | ABC transporter-like TERM 4643 5177906 - 5177888 - G 75 -8.8 -3.59649 | AAAGAAGCTTTTAAA TCACTGGG TTC CCCTGTGA TCACAACTTGACCTT Ava_4152 5178897 - 5179652 + | dienelactone hydrolase TERM 4644 5179700 - 5179727 + T 100 -17.2 -5.00884 | opp_overlap 5179707 TTCTTTGTCTTGGTA GTAGAAACGCGA TTAA TCGCGTTTCTAC TTTTTTAGCGCAACT TERM 4645 5179720 - 5179707 - T 77 -8.1 -3.96148 | opp_overlap 5179700 TCTTGGTAGTAGAAA CGCGA TTAA TCGCG TTTCTACTTTTTTAG Ava_4153 5180553 - 5179732 - | nitroreductase Ava_4154 5181680 - 5180577 - | ABC transporter, substrate-binding protein, aliphatic sulphonates TERM 4646 5181932 - 5181942 + r 70 -8.2 -3.41602 | AGACCCCTCTCCATA GCGC GGA GCGC TTCTCGTAGAGTACC Ava_4155 5183344 - 5182208 - | cystathionine gamma-lyase TERM 4647 5182666 - 5182649 - G 78 -9.1 -3.86776 | overlap 5182653 TAACCAACTATCAAA GGGACTG GGAA CAGCCCC AATTGCGTTTTGATA Ava_4156 5184719 - 5183334 - | cystathionine beta-synthase TERM 4648 5183418 - 5183447 + g 76 -9.5 -3.45742 | opp_overlap 5183425, overlap 5183417 GGTAATTAATCCTGC GGGAATATTATTA CGAG TAATAATAATCCC TGTTGTTCCTGATAA Ava_4157 5185385 - 5184771 - | aminotransferase TERM 4649 5185517 - 5185503 - H 70 -5.7 -4.48987 | GGCGGACAAGGAAAA TCAGG AAACA CCTGA GCTAGATTCATTGCA Ava_4158 5185982 - 5186455 + | hypothetical protein Ava_4159 5187947 - 5187009 - | hypothetical protein Ava_4160 5207745 - 5188000 - | VCBS TERM 4650 5193828 - 5193853 + g 74 -9.9 -3.14211 | gap 1 TAAATGTATTTTCTC TATTGCC-ACCT TTC AGGTTGGCAATA TTACTGAAACCACCT TERM 4651 5197205 - 5197229 + g 95 -12.9 -3.08867 | CCTGTAACTATTGTG CCGTCAACATC GCT GATGGTGACGG TATCTTCAGGATTAC TERM 4652 5198585 - 5198603 + g 76 -10.4 -2.9953 | opp_overlap 5198581, overlap 5198580 CCTGTAATGTAGCCA TCTTCATC GAG GATGAAGA TATCATTGTCATTGC TERM 4653 5198913 - 5198926 + g 71 -6.7 -4.20712 | opp_overlap 5198912, overlap 5198923 TATTCTCGACATCAC CACCT TGTA AGGTG TTTTCGCCTGTTCTA TERM 4654 5207969 - 5207950 - R 73 -5.8 -4.36127 | GGGAACAACCTAAAA TTCCAGTA ATTT TACTGAAA AACTCACACGAAGAT Ava_4161 5209141 - 5208395 - | hypothetical protein TERM 4655 5210094 - 5210136 + H 78 -10.1 -3.30474 | overlap 5210097 TTGCACAATCCGTCG TGAGGGCTGTTGACTGT CAACGGCCA ACAGTTAACAGTCCTTA TTAGTAGTTATGCAA TERM 4656 5210097 - 5210133 + H 81 -9.6 -3.78793 | overlap 5210094 CACAATCCGTCGTGA GGGCTGTTGACTGT CAACGGCCA ACAGTTAACAGTCC TTATTAGTAGTTATG Ava_4162 5210341 - 5211216 + | hypothetical protein TERM 4657 5211273 - 5211223 - f 100 -14.8 -2.85668 | CATGCTTAGATGATA GTCATTGGTCATTGGTCATTGGTC ATT GACAACCGACCACTGACCACTGAC ACCAGACAAAAGGCA Ava_4163 5211297 - 5212415 + | binding-protein dependent transport system inner membrane protein TERM 4658 5212454 - 5212426 - T 76 -9.7 -3.07043 | GCTAGTACCCCAAGA CTTTACCCAGG TTATTGT CCTGGGTAAAA GGCGATCGCAGATTT Ava_4164 5213358 - 5212492 - | hypothetical protein TERM 4659 5214540 - 5214555 + G 87 -4.8 -5.54079 | CAATTGATGTCGGGG TTGATT TTAA AATCAA TTTTTTAATTTTTGA Ava_4165 5213459 - 5215636 + | DEAD/DEAH box helicase-like TERM 4660 5215645 - 5215657 + F 84 -7.7 -4.59414 | TGCTTGAGGTTTCAA TCCCT GAT AGGGA TTTTGGTTATTGTGA TERM 4661 5215718 - 5215730 + F 78 -7.7 -4.30719 | ACGTATTTGTTTCAA TCCCT GAT AGGGA TTTGTTCTCACCAAG Ava_4166 5215892 - 5216170 + | hypothetical protein TERM 4662 5216228 - 5216214 - f 100 -8.6 -4.80455 | overlap 5216207 CATGTAAACAGAAAA TCTCTG AAT CAGAGA GGGAAGCTCTTAATA Ava_4167 5216398 - 5216643 + | hypothetical protein Ava_4168 5216646 - 5217005 + | hypothetical protein TERM 4663 5217362 - 5217344 - g 100 -9.6 -5.10154 | AGCCAAAATGAAAAA CTGCAACC ATT AGTTGCAG AAATTGGATGGACTC Ava_4169 5217053 - 5218072 + | hypothetical protein Ava_4170 5218091 - 5221366 + | hypothetical protein TERM 4664 5222384 - 5222369 - g 70 -7.6 -3.64103 | opp_overlap 5222368 GATGTAGAGGCTAAA GCTTAC GCAA GTAAGC ATATTAGTAAAAAGA Ava_4171 5221412 - 5222428 + | hypothetical protein Ava_4172 5222428 - 5223135 + | hypothetical protein Ava_4173 5223246 - 5223857 + | hypothetical protein Ava_4174 5223900 - 5224772 + | CRISPR-associated Cas5e family protein Ava_4175 5224857 - 5225447 + | hypothetical protein Ava_4176 5225621 - 5226622 + | hypothetical protein Ava_4177 5226684 - 5226956 + | hypothetical protein TERM 4665 5227242 - 5227230 - g 76 -7.7 -4.23674 | TTCTATTAACACAAA TCCCT ATC AGGGA TTGAAAGTCTCTGCG TERM 4666 5227314 - 5227302 - g 76 -7.7 -4.23674 | TTCTATTAACACAAA TCCCT ATC AGGGA TTGAAAGTATATATT Ava_4178 5226976 - 5227356 + | hypothetical protein TERM 4667 5227389 - 5227377 - T 78 -7.7 -4.23674 | TTCTATTAACACAAA TCCCT ATC AGGGA TTGAAAGATTCCTAT TERM 4668 5227466 - 5227454 - T 78 -7.7 -4.23674 | TTCTATTAACACAAA TCCCT ATC AGGGA TTGAAAGCCTAACTT TERM 4669 5227539 - 5227527 - T 78 -7.7 -4.23674 | TTCTATTAACACAAA TCCCT ATC AGGGA TTGAAAGGATAGAGA TERM 4670 5227615 - 5227603 - T 78 -7.7 -4.23674 | TTCTATTAACACAAA TCCCT ATC AGGGA TTGAAAGCACTTTAG TERM 4671 5227696 - 5227684 - T 78 -7.7 -4.23674 | TTCTATTAACACAAA TCCCT ATC AGGGA TTGAAAGCTAAAACA TERM 4672 5227768 - 5227756 - T 78 -7.7 -4.23674 | TTCTATTAACACAAA TCCCT ATC AGGGA TTGAAAGTTAATTTT TERM 4673 5227842 - 5227830 - T 78 -7.7 -4.23674 | TTCTATTAACACAAA TCCCT ATC AGGGA TTGAAAGCTTGCATT TERM 4674 5227912 - 5227900 - T 78 -7.7 -4.23674 | TTCTATTAACACAAA TCCCT ATC AGGGA TTGAAAGAGGAACAA TERM 4675 5227984 - 5227972 - T 78 -7.7 -4.23674 | TTCTATTAACACAAA TCCCT ATC AGGGA TTGAAAGGGCAGATA TERM 4676 5228056 - 5228044 - T 78 -7.7 -4.23674 | TTCTATTAACACAAA TCCCT ATC AGGGA TTGAAAGTACTCGCG TERM 4677 5228126 - 5228114 - T 78 -7.7 -4.23674 | TTCTATTAACACAAA TCCCT ATC AGGGA TTGAAAGGTGGCTGG TERM 4678 5228198 - 5228186 - T 78 -7.7 -4.23674 | TTCTATTAACACAAA TCCCT ATC AGGGA TTGAAAGTGGCAATA TERM 4679 5228270 - 5228258 - T 78 -7.7 -4.23674 | TTCTATTAACACAAA TCCCT ATC AGGGA TTGAAAGATCCAGTA TERM 4680 5228342 - 5228330 - T 78 -7.7 -4.23674 | TTCTATTAACACAAA TCCCT ATC AGGGA TTGAAAGCGGCGGCG TERM 4681 5228413 - 5228401 - T 78 -7.7 -4.23674 | TTCTATTAACACAAA TCCCT ATC AGGGA TTGAAAGCTTGCCAT TERM 4682 5228486 - 5228474 - T 78 -7.7 -4.23674 | TTCTATTAACACAAA TCCCT ATC AGGGA TTGAAAGACCTCAGT TERM 4683 5228555 - 5228543 - T 78 -7.7 -4.23674 | TTCTATTAACACAAA TCCCT ATC AGGGA TTGAAAGATTTTAAA TERM 4684 5228626 - 5228614 - T 78 -7.7 -4.23674 | TTCTATTAACACAAA TCCCT ATC AGGGA TTGAAAGGAGAGGCA TERM 4685 5228697 - 5228685 - T 78 -7.7 -4.23674 | TTCTATTAACACAAA TCCCT ATC AGGGA TTGAAAGAAAAGATG TERM 4686 5228772 - 5228760 - T 78 -7.7 -4.23674 | TTCTATTAACACAAA TCCCT ATC AGGGA TTGAAAGTAAGAAGG TERM 4687 5228846 - 5228834 - T 78 -7.7 -4.23674 | TTCTATTAACACAAA TCCCT ATC AGGGA TTGAAAGAAAGACTT TERM 4688 5228918 - 5228906 - T 78 -7.7 -4.23674 | TTCTATTAACACAAA TCCCT ATC AGGGA TTGAAAGAGCTTCAA TERM 4689 5228988 - 5228976 - T 78 -7.7 -4.23674 | TTCTATTAACACAAA TCCCT ATC AGGGA TTGAAAGAAAAGAAA TERM 4690 5229058 - 5229046 - T 78 -7.7 -4.23674 | TTCTATTAACACAAA TCCCT ATC AGGGA TTGAAAGGCGTAAAC TERM 4691 5229130 - 5229118 - T 78 -7.7 -4.23674 | TTCTATTAACACAAA TCCCT ATC AGGGA TTGAAAGGGAAGCGT TERM 4692 5229201 - 5229189 - T 78 -7.7 -4.23674 | TTCTATTAACACAAA TCCCT ATC AGGGA TTGAAACGTGCTAGC TERM 4693 5229275 - 5229263 - T 78 -7.7 -4.23674 | TTCTATTAACACAAA TCCCT ATC AGGGA TTGAAACCTAATAAA Ava_4179 5230259 - 5229675 - | hypothetical protein Ava_4180 5231006 - 5230269 - | hypothetical protein TERM 4694 5230864 - 5230845 - G 71 -5 -4.70659 | TTGGATACGCAAAAA GTCAGCTT CGCT AATCTGAC TAGCACCCCCTACAA TERM 4695 5231308 - 5231298 - H 81 -4 -5.54192 | opp_overlap 5231298 ATTAATCTAAAAAAA TTAC TAT GTAA ATTCTTGACAAAGTG TERM 4696 5233327 - 5233303 - g 70 -7.9 -3.66999 | opp_overlap 5233314 AGGTAGCGATTGAAA CCCTGAGCA TTGACCC TACTCAGGG GCTAGTTGAATTGCC TERM 4697 5233610 - 5233586 - g 70 -8 -3.59315 | overlap 5233588 GCAATTATCGTCAAA TACTTCTACT CCGTT AGTAGAAGCA GTGGGGATGGTTCAC Ava_4181 5231460 - 5233739 + | filamentous haemagglutinin-like Ava_4182 5233736 - 5235562 + | surface antigen variable number TERM 4698 5235895 - 5235865 - g 100 -11.8 -4.10925 | AGAGAGGCTTTAAAA TTTCCCCCCTCCCT AGT AGGGAAGGGGGTTA GGGGGTTAGGTTTCG TERM 4699 5237370 - 5237353 - g 73 -7.1 -4.1585 | opp_overlap 5237364, overlap 5237364 TTACAAGTGGCAAAA TTGCAAA ACTA TTTGCAA CAAACTTGTCAAGAT Ava_4183 5235601 - 5238435 + | tetratricopeptide TPR_4 TERM 4700 5238900 - 5238886 - g 72 -7.2 -4.0044 | AAGCAGGACTAGAAA TTTGGT TTG ACCAAA ACGATATTCCTTTAG Ava_4184 5238786 - 5241932 + | sensor protein Ava_4185 5241956 - 5242732 + | hypothetical protein TERM 4701 5243114 - 5243104 - f 81 -4 -5.44721 | opp_overlap 5243113, overlap 5243113 AGCAGTCTAAAAAAA CATT AAT AATG CGTGTATTCCACACA TERM 4702 5244409 - 5244388 - g 71 -8.8 -3.3579 | overlap 5244386 AAAGCCTTTGAAACA GGTAGAGT TCATGT ACTCTACC AAGCAGTGGCTTATA TERM 4703 5245145 - 5245155 + G 71 -6.8 -4.08945 | opp_overlap 5245145 5245144 GCTACGTATACAAAG GTGG AAA CCAC TTTTCGGGAACTCAT Ava_4186 5243542 - 5245386 + | glucose-methanol-choline oxidoreductase Ava_4187 5245550 - 5246650 + | hypothetical protein Ava_4188 5246698 - 5247174 + | hypothetical protein Ava_4189 5247270 - 5247938 + | pentapeptide repeat-containing protein TERM 4704 5248101 - 5248138 + F 74 -7.9 -3.94402 | AGTCTACTCCCATGT TTAGCAATGAGTTTTAT ATAT ATTTGACTCATTGCTAA TTATTTGAGAATTCT TERM 4705 5248579 - 5248569 - g 80 -2.6 -5.41746 | AATTTCCGAAAAAAA TAAA GGA TTTA AAAAAAGAGTTAAAA Ava_4190 5248193 - 5249308 + | xylose isomerase-like TIM barrel Ava_4191 5249541 - 5251211 + | multicopper oxidase, types 2 and 3 Ava_4192 5251208 - 5251597 + | hypothetical protein TERM 4706 5251661 - 5251650 - g 71 -3 -4.9725 | overlap 5251655 ATGGCTACAGAAAAA TATC ATGA GATA CTCAAAAAATACTTT Ava_4193 5251635 - 5252024 + | hypothetical protein TERM 4707 5252127 - 5252099 - f 73 -8.7 -3.31792 | overlap 5252100 GGAGCAGGGGGAGAA GTCGCAAGGAGGG TTT CCCTCCGGGCGAA CTTCGGGGGAGAAAG TERM 4708 5252126 - 5252100 - f 83 -12.2 -2.58861 | overlap 5252099 GAGCAGGGGGAGAAG TCGCAAGGAGGG TTT CCCTCCGGGCGA ACTTCGGGGGAGAAA Ava_4194 5252222 - 5253226 + | xylose isomerase-like TIM barrel Ava_4195 5253233 - 5255185 + | hypothetical protein Ava_4196 5255246 - 5256655 + | peroxidase Ava_4197 5256875 - 5257903 + | hypothetical protein TERM 4709 5258070 - 5258057 - g 70 -3.9 -4.8236 | CACTCAAAAAAACAA TTCAT TCAT ATGAA ACGTTGGTTATTAGC Ava_4198 5257970 - 5260552 + | glucan 1,4-alpha-glucosidase Ava_4199 5262781 - 5260727 - | hypothetical protein TERM 4710 5262073 - 5262059 - G 74 -7.8 -3.99806 | opp_overlap 5262059 AGAAGCGACCATAAA CGCTGA TTG CCAGCG TTGTTGCCGCAATTC TERM 4711 5262744 - 5262756 + g 74 -7.7 -3.91144 | GGTTTTCTTCCTCTG GTTGG ATG CCAAC TTTCTGGGATATCCC hslO 5263839 - 5262934 - | Hsp33-like chaperonin Ava_4201 5264070 - 5264450 + | hypothetical protein Ava_4202 5265059 - 5264463 - | hypothetical protein Ava_4203 5265534 - 5265109 - | hypothetical protein hisD 5267057 - 5265756 - | histidinol dehydrogenase TERM 4712 5266764 - 5266720 - G 72 -10 -2.81872 | opp_overlap 5266762, overlap 5266717 5266731 CCCAGTACAATATCA TCATCGCCAAAGTGTACCCA GCTTT TGGGGACTCGCTGACGATGA AAAGCTTCAATTTGG TERM 4713 5267882 - 5267861 - g 73 -7.4 -4.08689 | AACAAAACCTACAAA TCATCAGT TAAGAC ACTGATGA AAAATTACCTAAGCG rpsT 5267786 - 5268079 + | 30S ribosomal protein S20 TERM 4714 5268101 - 5268142 + F 84 -11.7 -3.18264 | opp_overlap 5268082 5268133 GTTGTCAGTGGCTAG TTGTCAGTGGTTGTTTGAC TACT GACAAGCGACAACTGACAA TTGATAACTAACAAA Ava_4206 5268159 - 5268944 + | Sec-independent protein translocase TatD TERM 4715 5271341 - 5271319 - g 73 -9.8 -3.01712 | opp_overlap 5271319 TCCCTTCTTGGAACA TGACGACGCG AAC CGCGCCCTCA TGGGTTCCAATATGC TERM 4716 5272245 - 5272233 - g 70 -5.5 -4.41206 | AAGTAGGGGATAAAA TGGCA GGT CGCCA CGGTAATAAAGGGAT rpoB 5269721 - 5273074 + | DNA-directed RNA polymerase subunit beta TERM 4717 5273358 - 5273379 + G 70 -5.9 -4.3739 | TAATTACCGGACTCT CAAGCCA GAAATGGA TGGCTTG TTTTGTGAGCGCATC TERM 4718 5274175 - 5274156 - g 71 -8.6 -3.41878 | gap 1, opp_overlap 5274156 CGCTTTAATTGACAA CGGT-CGTC GCG GACGCACCG TAGTTGGGGCGAACA Ava_4208 5273209 - 5275086 + | DNA-directed RNA polymerase subunit gamma TERM 4719 5275143 - 5275100 - f 95 -12.7 -3.6707 | opp_overlap 5275105 5275107 AGTTAAGAGTCCAAA GTCAATAGTCCATAGTTAT ATAGCA AAAACTAGGGACTATTGAC TAAGCGCAAAGTCGA TERM 4720 5276083 - 5276058 - g 81 -5.5 -5.09259 | gap 1, overlap 5276061 5276065 CATCCCAAAACAAAA GAAGTGATTGCG GCA CGCAAT-ACCCC CATTTCTGATGACTT TERM 4721 5276080 - 5276061 - g 75 -5.8 -4.6313 | gap 1, overlap 5276058 5276065 CCCAAAACAAAAGAA GTGATTGCG GCA CGCAAT-AC CCCCATTTCTGATGA TERM 4722 5276583 - 5276553 - g 84 -11.2 -3.68261 | opp_overlap 5276556, overlap 5276556 GGACAACAGGTCAAA CAAGGTCAACTACT AGC AGAAGTTGCCCTTG GTGGACGTACCACCC TERM 4723 5276580 - 5276556 - g 72 -7.1 -3.96449 | opp_overlap 5276556, overlap 5276553 CAACAGGTCAAACAA GGTCAACTACT AGC AGAAGTTGCCC TTGGTGGACGTACCA Ava_4209 5275281 - 5279348 + | DNA-directed RNA polymerase subunit beta' TERM 4724 5279378 - 5279401 + T 100 -12.6 -4.79683 | opp_overlap 5279378 CATCTAAATTAAAAA GGCAAAAGAA TTAC TTCTTTTGCC TTTATTTTATGGATT TERM 4725 5279401 - 5279378 - T 100 -12.6 -5.00138 | opp_overlap 5279378 CATCTAAATTAAAAA GGCAAAAGAA TTAC TTCTTTTGCC TTTATTTTATGGATT TERM 4726 5279552 - 5279519 - T 70 -9.1 -3.04144 | opp_overlap 5279519 GTTTGATTGGTAATA GCTAATAGGCAAT TTTTTACT ATTACCTATTAGC TATTACCAAACACCG Ava_4210 5280693 - 5279614 - | Fatty acid desaturase TERM 4727 5280081 - 5280096 + g 70 -2.6 -4.92783 | gap 1 TCCACAGTACAGTGC TGGTGAT GAC ATC-CCA TTTTTCTGATGGCTT Ava_4211 5282118 - 5281066 - | Fatty acid desaturase TERM 4728 5281104 - 5281094 - G 71 -6.8 -4.16921 | opp_overlap 5281096 TAATAATCTTTAAAA GGCT GAT AGCC AACATCAGTTCGATA TERM 4729 5282333 - 5282299 - R 82 -11 -3.4158 | opp_overlap 5282295, overlap 5282292 GCGAAAAATTACTAA GTCATTAGTCATTTTT TAG ACAAATAACTAATGAC ACATAATAAACTAAT Ava_4212 5283166 - 5282348 - | Delta-9 acyl-phospholipid desaturase Ava_4213 5283253 - 5284482 + | Cys/Met metabolism pyridoxal-phosphate-dependent enzyme Ava_4214 5285680 - 5284487 - | coenzyme F420 hydrogenase/dehydrogenase beta subunit-like TERM 4730 5284772 - 5284792 + g 70 -9.7 -2.56231 | opp_overlap 5284772, overlap 5284771 5284770 AGGTTGAGTATCTAA CTGGTCTTG CAC CAAGTCCAG CATTTCTTTACCTGT TERM 4731 5284792 - 5284772 - G 74 -9.7 -3.09635 | opp_overlap 5284772 5284771 5284770 AGGTTGAGTATCTAA CTGGTCTTG CAC CAAGTCCAG CATTTCTTTACCTGT TERM 4732 5285974 - 5285958 - g 85 -4.3 -5.53991 | GAGCCATGAAAAAAA CGGTTGA AGT CCTACCG GATCAAACAGCGCTA TERM 4733 5286496 - 5286515 + G 70 -2.8 -4.98255 | opp_overlap 5286499, overlap 5286499 CACATACCCATTCAT TAACGCTG CTCA CAGTGTAA TTTTTGTGGTTGCAG Ava_4215 5285948 - 5286670 + | 6-phosphogluconolactonase Ava_4216 5286842 - 5287705 + | FHA domain-containing protein TERM 4734 5287731 - 5287766 + F 71 -9 -3.13177 | GGTATGGGGGTGTAA GGGTGTAGGGGTATCA GTGT TTAAAACCCTACACCC TTACATCTGAAATAT Ava_4217 5287821 - 5288564 + | hypothetical protein Ava_4218 5288712 - 5289866 + | sporulation protein SpoIID-like Ava_4219 5291299 - 5290004 - | hypothetical protein Ava_4220 5291533 - 5292012 + | hypothetical protein TERM 4735 5292004 - 5292017 + T 70 -5.3 -4.49556 | GCTTTAAAGTCACCA GACAA ATAA TTGTC TTTATTTCCTCACAG Ava_4221 5293120 - 5292413 - | phosphatidate cytidylyltransferase TERM 4736 5292800 - 5292784 - G 70 -5.7 -4.31379 | ACCAAGCCACTAAAA CGCCGAC ACT GACAGCG TAAAAAAATGTGCCT TERM 4737 5292971 - 5292949 - G 75 -7.1 -4.31379 | gap 1, opp_overlap 5292948 ACCAAGCCAGTAAAA TCACA-TGGC CAGC GCCAATGTGA ACTATTTTTCGGACT Ava_4222 5293222 - 5293431 + | hypothetical protein TERM 4738 5293749 - 5293734 - g 77 -4.7 -5.00616 | opp_overlap 5293734 5293747 TTCGCTCCTAAAAAA CTGCT TACCCC AGCAG GTGTGTTTCATGCTT Ava_4223 5293641 - 5294438 + | hypothetical protein Ava_4224 5294696 - 5295454 + | PpiC-type peptidyl-prolyl cis-trans isomerase TERM 4739 5296533 - 5296563 + G 80 -9.8 -3.68506 | overlap 5296537 ACCAACTCTCGATGT TATGGCGATCGC ACTTTTG GCGATCGCTGTA TTTGAATCAATATTG TERM 4740 5296537 - 5296559 + G 78 -10.6 -3.27676 | overlap 5296533 ACTCTCGATGTTATG GCGATCGC ACTTTTG GCGATCGC TGTATTTGAATCAAT TERM 4741 5297188 - 5297167 - g 74 -4.5 -4.7497 | opp_overlap 5297177 GTCATCGACCAAAAA CTAACAATT GGGC AATTGGTAG CCTTTCAAATGCTTT Ava_4225 5295487 - 5298084 + | Type I secretion system ATPase, HlyB TERM 4742 5298140 - 5298162 + F 100 -10.7 -5.86061 | opp_overlap 5298144 CATAATACTTTTGGA CGAATAGAG CAAAA CTCTATTCG TTTTTTTTGCTCAAA TERM 4743 5300804 - 5300768 - g 72 -7.4 -4.04394 | gap 1 GTGAAAGCAACGAAA GCAACAA-TGTCACCGC CAAA GCGATTACAATTGCTGC ACCAGATTTAATTGT Ava_4226 5298424 - 5302788 + | peptidase S8 and S53, subtilisin, kexin, sedolisin Ava_4227 5303793 - 5303107 - | hypothetical protein TERM 4744 5303305 - 5303332 + g 71 -4.8 -4.66938 | opp_overlap 5303297, overlap 5303307 CTCAATACTAGCTGT CATGCTGGCGCT AGAA AGTGCCAACATC TTTTCTGTTGGGGGT TERM 4745 5303307 - 5303330 + g 72 -7.4 -3.94773 | opp_overlap 5303297, overlap 5303305 CAATACTAGCTGTCA TGCTGGCGCT AGAA AGTGCCAACA TCTTTTCTGTTGGGG TERM 4746 5303845 - 5303863 + r 70 -5.4 -4.45544 | opp_overlap 5303836 CAAGAGTTTTATGAC TAAAAAGC AGT GTTTTTTA TTTTACTTGGTCAAC Ava_4228 5305955 - 5303874 - | hypothetical protein TERM 4747 5304230 - 5304216 - G 72 -9.2 -3.21551 | opp_overlap 5304218, overlap 5304205 AAAACCACTGACGAA GCCGCC ACT AGCGGC GATTTGTAAGGCTTT Ava_4229 5306726 - 5306157 - | hypothetical protein TERM 4748 5306836 - 5306864 + H 79 -10.9 -3.04398 | opp_overlap 5306836 5306837, overlap 5306836 GAGACGCAGCGAAAA GTCGGAGCGCCGG CTT CCGGCGATCTGAA CTTTTCAAGACAGAG TERM 4749 5306836 - 5306865 + H 89 -10.7 -4.07568 | gap 1, opp_overlap 5306836 5306837, overlap 5306836 GAGACGCAGCGAAAA G-TCGGAGCGCCGG CTT CCGGCGATCTGAAC TTTTCAAGACAGAGG TERM 4750 5306864 - 5306836 - H 83 -8.7 -4.20531 | opp_overlap 5306836 5306836, overlap 5306837 GAGACGCAGCGAAAA GTCGGAGCGCCGG CTT CCGGCGATCTGAA CTTTTCAAGACAGAG TERM 4751 5306863 - 5306837 - H 87 -12.2 -3.11836 | opp_overlap 5306836 5306836, overlap 5306836 AGACGCAGCGAAAAG TCGGAGCGCCGG CTT CCGGCGATCTGA ACTTTTCAAGACAGA TERM 4752 5307344 - 5307375 + G 74 -10.2 -2.57876 | opp_overlap 5307344, overlap 5307316 5307343 5307342 GTTATTTACCAGAAA CGCCGCCGTTATAT ACAG ATATGACGGTGGAG GGTTTTCTGCATTTT TERM 4753 5308001 - 5307987 - g 70 -9.2 -2.83403 | overlap 5307986 TGGTTTGCACGAAAT GCGCCG TGT CAGCGC TACCCTAGAAGATGT Ava_4230 5307100 - 5308095 + | ABC transporter-like Ava_4231 5308096 - 5308908 + | putative ABC-2 type transport system permease protein TERM 4754 5309044 - 5309055 + G 70 -3.6 -4.77036 | TGGAAATATCTGTTT TGGC TGGG GCCG TTTTTGATAATGGCG Ava_4232 5309002 - 5310894 + | hypothetical protein Ava_4233 5310898 - 5311512 + | hypothetical protein purU 5311721 - 5312575 + | formyltetrahydrofolate deformylase TERM 4755 5313351 - 5313334 - g 74 -9.9 -3.19602 | overlap 5313332 CCTTCTACATCAACA GCTGGAA AGCT TTCCAGC GCCATGCTGCCACAA Ava_4235 5312877 - 5315138 + | copper-translocating P-type ATPase Ava_4236 5315153 - 5315554 + | hypothetical protein TERM 4756 5315580 - 5315599 + F 80 -8.6 -3.83998 | GATCCAAGTTGTTGA CTCTCTAG TTAG CTGGAGAG TTTAGTATAAGATCA TERM 4757 5315689 - 5315674 - g 74 -4.7 -4.80487 | CAGAAGCAAAACAAA TTGGC GTAGTT GCCAA AGAAAGCGGCGTACC TERM 4758 5316022 - 5315976 - g 73 -9 -3.50447 | opp_overlap 5315965 5315976 5315979, overlap 5315979 CTAATTTTGAGACAA GAATTATCAGGATTACTTTC TGGCTGG GAAATCAAGCCTGATAATTC TTCTACAACTATTTG Ava_4237 5315646 - 5316056 + | MerR family transcriptional regulator Ava_4238 5317113 - 5316160 - | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding Ava_4239 5318440 - 5317442 - | hypothetical protein Ava_4240 5319915 - 5318542 - | twin-arginine translocation pathway signal TERM 4759 5318892 - 5318882 - G 70 -5.4 -4.56914 | opp_overlap 5318882 GCAGTTAAATCAAAA GTGA TAA TCAC CTGATTGCTCACTTG Ava_4241 5320282 - 5321025 + | hypothetical protein TERM 4760 5321202 - 5321222 + T 74 -4.6 -4.98911 | GTGCTAGTTTAAGGT GCGTTTGC CTTGA GCGATCGC TTTATTTTTCTGCTA Ava_4242 5321483 - 5321280 - | NifT/FixU Ava_4243 5321746 - 5321480 - | NifZ TERM 4761 5322891 - 5322838 - H 78 -10.6 -3.00017 | opp_overlap 5322831 5322838, overlap 5322886 CCGAAAGTCAAACCA TTTTGGATTTTAGATTTGTGATTC TCGATG GAATCACCAATCCACAATCCAACA TTGGTAACGTAGGCA TERM 4762 5322838 - 5322891 + H 71 -9.1 -3.16564 | opp_overlap 5322838 5322886, overlap 5322831 CCGAAAGTCAAACCA TTTTGGATTTTAGATTTGTGATTCT CGAT GGAATCACCAATCCACAATCCAACA TTGGTAACGTAGGCA TERM 4763 5323897 - 5323876 - g 70 -10.1 -2.5031 | overlap 5323875 5323873 CAATATGAAAATGAT GCGCCACTG TCGC CAGTGCCGC GCGGATGCGGTAGGG Ava_4244 5322983 - 5324437 + | nitrogenase cofactor biosynthesis protein NifB Ava_4245 5324521 - 5325717 + | aromatic amino acid beta-eliminating lyase/threonine aldolase Ava_4246 5325795 - 5326724 + | Fe-S cluster assembly protein NifU TERM 4764 5326866 - 5326837 - f 81 -8.7 -4.07687 | gap 1 AGGCCGTTCTCAAAA GCGATCGC-CTA GTTATTT TAGAGCGATCGC CGCCATCAAACACAA Ava_4247 5326926 - 5327816 + | nitrogenase iron protein subunit NifH Ava_4248 5327904 - 5329379 + | nitrogenase molybdenum-iron protein alpha chain Ava_4249 5329452 - 5330990 + | nitrogenase molybdenum-iron protein beta chain Ava_4250 5331063 - 5331350 + | Mo-dependent nitrogenase-like TERM 4765 5331536 - 5331552 + G 74 -6.6 -4.2558 | overlap 5331549 GCCCAACCTGGTGCA GCACAA GGAGG TTGTGC TTTTGATGGCGCATC TERM 4766 5331878 - 5331867 - g 75 -5.8 -4.67982 | CCGCAGCCAAGAAAA CAGG TATA CCTG TAATCCCTGTCAATT Ava_4251 5331416 - 5334133 + | nitrogenase MoFe cofactor biosynthesis protein NifE Ava_4252 5334162 - 5334566 + | dinitrogenase iron-molybdenum cofactor biosynthesis Ava_4253 5334563 - 5335039 + | hypothetical protein Ava_4254 5335088 - 5335336 + | hypothetical protein Ava_4255 5335320 - 5335637 + | nitrogen fixation protein NifW Ava_4256 5335650 - 5336447 + | MoeZ/MoeB Ava_4257 5336471 - 5336842 + | HesB/YadR/YfhF Ava_4258 5336877 - 5337176 + | ferredoxin (2Fe-2S) Ava_4259 5337247 - 5337543 + | 4Fe-4S ferredoxin, iron-sulfur binding TERM 4767 5338797 - 5338814 + G 71 -7 -4.18197 | TCCAGAACTTTTTGC GGATGG GAAAAG CCATCC TTTTGCATCAGCGAT Ava_4260 5338552 - 5340147 + | XRE family transcriptional regulator Ava_4261 5340883 - 5340332 - | hypothetical protein TERM 4768 5340399 - 5340411 + g 80 -2.7 -5.48514 | GCTTGTATTAATGGA TGTTG TTG CAATA TTTTTATTTCTTCCT Ava_4262 5341431 - 5340880 - | hypothetical protein Ava_4263 5343158 - 5341704 - | hypothetical protein Ava_4264 5345455 - 5343242 - | transketolase, central region TERM 4769 5343979 - 5344001 + g 77 -10.6 -3.14211 | CCATTGCTTGGATGA CGGTTTGCCA GAT TGGTAAGCCG TTGATGGCGAAAGAT Ava_4265 5345596 - 5346432 + | hypothetical protein Ava_4266 5346601 - 5348262 + | peptidase S15 Ava_4267 5351067 - 5348305 - | multi-sensor Signal transduction histidine kinase TERM 4770 5350365 - 5350352 - G 79 -8.1 -4.35461 | opp_overlap 5350352, overlap 5350346 CCAACACCATCAAAA GCAGC AACT GCTGC TTCTAAAGTCGGCTG TERM 4771 5351351 - 5351318 - R 81 -8.3 -4.33754 | opp_overlap 5351325, overlap 5351320 5351325 AATTAGAATTTAAAA TAGAAAAGACACG AAGTTAAG CGTGTCTTTTCTC AGGCATAATTTAGGT TERM 4772 5351349 - 5351320 - R 88 -10.9 -3.76167 | opp_overlap 5351325, overlap 5351318 5351325 TTAGAATTTAAAATA GAAAAGACACG AAGTTAAG CGTGTCTTTTC TCAGGCATAATTTAG TERM 4773 5351344 - 5351325 - R 76 -5 -4.90471 | opp_overlap 5351325, overlap 5351320 5351318 ATTTAAAATAGAAAA GACACG AAGTTAAG CGTGTC TTTTCTCAGGCATAA Ava_4268 5352592 - 5351405 - | anion-transporting ATPase TERM 4774 5352930 - 5352895 - R 73 -6.2 -4.41348 | opp_overlap 5352906, overlap 5352898 GTCGCGCCAAATAAA TGATGTACAGACGTTG TATG CAACGTCTCTACAGTA CAGAATAAAGTGCAT TERM 4775 5352927 - 5352898 - R 87 -12.3 -3.18452 | opp_overlap 5352906, overlap 5352895 GCGCCAAATAAATGA TGTACAGACGTTG TATG CAACGTCTCTACA GTACAGAATAAAGTG Ava_4269 5353373 - 5352987 - | hypothetical protein Ava_4270 5353968 - 5353399 - | hypothetical protein Ava_4271 5354820 - 5354023 - | hypothetical protein Ava_4272 5355763 - 5354831 - | hypothetical protein TERM 4776 5354870 - 5354858 - G 70 -2.7 -5.04601 | overlap 5354860 CTTATAAATTAAAAA TACTG AAC CAATA GGGCCAGGATTTTCT TERM 4777 5355670 - 5355690 + g 89 -6.9 -5.41143 | AAACTTTTGCAGCTT TTGGTGCTG AAC TAGCATCAA TTTTTTTACAACCTG TERM 4778 5355800 - 5355776 - R 100 -7.1 -5.58522 | opp_overlap 5355777, overlap 5355777 CATATAAAATAAAAA TCCGCTACAGC ATG ACTATAGCGGT TAATAATTCAAAATT TERM 4779 5355799 - 5355777 - R 88 -10.6 -3.92673 | opp_overlap 5355777, overlap 5355776 ATATAAAATAAAAAT CCGCTACAGC ATG ACTATAGCGG TTAATAATTCAAAAT Ava_4273 5357139 - 5355889 - | Rho termination factor-like Ava_4274 5358519 - 5357530 - | auxin efflux carrier Ava_4275 5361081 - 5358685 - | heat shock protein DnaJ-like TERM 4780 5362377 - 5362387 + G 71 -6.8 -4.11692 | GGAATTCCTGTAGCA GCTG GTG CAGC TTTTCAAAGTAAATA Ava_4276 5361963 - 5362997 + | dehydrogenase, E1 component Ava_4277 5363099 - 5363968 + | aldose 1-epimerase Ava_4278 5364638 - 5364291 - | hypothetical protein Ava_4279 5364884 - 5365672 + | hypothetical protein Ava_4280 5365674 - 5366912 + | hypothetical protein Ava_4281 5367225 - 5368238 + | hypothetical protein Ava_4282 5368783 - 5368556 - | hypothetical protein Ava_4283 5369420 - 5368776 - | hypothetical protein TERM 4781 5369590 - 5369566 - R 76 -10.7 -2.67364 | opp_overlap 5369565, overlap 5369565 5369564 ATATCACTAAAAATT TGGGCAGACCA ATT TGGTCTACCCC CGAAGTTACTTGGCT Ava_4284 5370183 - 5369596 - | hypothetical protein TERM 4782 5369857 - 5369877 + g 72 -7.6 -3.79906 | opp_overlap 5369856 5369857 ACTGATGGGGATAAT TTCTGCGG CTTTA CCGTAGAA TTCTTGTACCCGTGA Ava_4285 5370381 - 5371724 + | hypothetical protein Ava_4286 5371805 - 5372623 + | CobB/CobQ-like glutamine amidotransferase TERM 4783 5372695 - 5372653 - f 100 -15.8 -2.64973 | opp_overlap 5372657 5372658, overlap 5372658 5372693 ACTAATTTGATATCA TTAAATTAACGTGCGCCTCC GTT GGAGACTCACGTTAAATTAA TTAAAGCAGCATTAA TERM 4784 5372657 - 5372691 + F 78 -10 -3.33696 | opp_overlap 5372653 5372658, overlap 5372658 ATTTGATATCATTAA ATTAACGTGCGCCTCC GTT GGAGACTCACGTTAAA TTAATTAAAGCAGCA TERM 4785 5372658 - 5372690 + F 88 -13.5 -2.60075 | opp_overlap 5372653 5372658, overlap 5372657 TTTGATATCATTAAA TTAACGTGCGCCTCC GTT GGAGACTCACGTTAA ATTAATTAAAGCAGC TERM 4786 5372690 - 5372658 - f 100 -15.7 -3.81951 | opp_overlap 5372658 5372657, overlap 5372653 TTTGATATCATTAAA TTAACGTGCGCCTCC GTT GGAGACTCACGTTAA ATTAATTAAAGCAGC TERM 4787 5372714 - 5372758 + F 74 -3.6 -5.1848 | gap 1, opp_overlap 5372719, overlap 5372716 5372717 5372718 AAGCAGCATTAATTA TGA-AAGGCTCACAGTGAGGC TTAT GCCTTACTATGAGCCAGATTA TTTTTTAGCTTAATT TERM 4788 5372716 - 5372755 + F 73 -5.6 -4.67173 | opp_overlap 5372719, overlap 5372714 5372717 5372718 GCAGCATTAATTATG AAAGGCTCACAGTGAGGC TTAT GCCTTACTATGAGCCAGA TTATTTTTTAGCTTA TERM 4789 5372717 - 5372754 + F 73 -9.1 -3.38677 | opp_overlap 5372719, overlap 5372716 5372714 5372718 CAGCATTAATTATGA AAGGCTCACAGTGAGGC TTAT GCCTTACTATGAGCCAG ATTATTTTTTAGCTT TERM 4790 5372718 - 5372753 + F 85 -12.6 -2.61579 | opp_overlap 5372719, overlap 5372717 5372716 5372714 AGCATTAATTATGAA AGGCTCACAGTGAGGC TTAT GCCTTACTATGAGCCA GATTATTTTTTAGCT TERM 4791 5372752 - 5372719 - f 100 -16.1 -3.85704 | opp_overlap 5372718 5372717 5372716 5372714 GCATTAATTATGAAA GGCTCACAGTGAGGC TTAT GCCTTACTATGAGCC AGATTATTTTTTAGC TERM 4792 5373038 - 5373028 - g 70 -5.4 -4.50627 | TACCCATTAAAGAAA TTCC AGG GGAA CTACAATTATCAGCC Ava_4287 5372844 - 5373920 + | glycosyl transferase, group 1 Ava_4288 5374728 - 5373985 - | hypothetical protein Ava_4289 5376182 - 5374782 - | extracellular solute-binding protein TERM 4793 5375146 - 5375134 - G 73 -2.7 -5.1523 | opp_overlap 5375105 TTCATAACATAAAAA TTACT GCC AGCAA TTGCTGTAGCTGATT TERM 4794 5376068 - 5376082 + g 75 -8.6 -3.77831 | GGAAAAATTGTGTGA TTTGGG ATA CCCAAA TTTGGATATTCATCA Ava_4290 5376297 - 5377196 + | peptidase U61, LD-carboxypeptidase A Ava_4291 5377747 - 5377199 - | hypothetical protein TERM 4795 5379054 - 5379042 - g 71 -9.1 -3.34522 | AGATTTGTTAATTAA TCCCC AAT GGGGA GAAAAATACTTTATG Ava_4292 5377942 - 5379381 + | deoxyribodipyrimidine photo-lyase type I TERM 4796 5379590 - 5379534 - f 70 -5.7 -4.36433 | overlap 5379536 5379538 5379539 5379570 CGAAAGATCAATAAA TATACGTAGGGCATCGCCCACCACAAC CAT GATAAAGTAGGCGATGCCCACCCTATT GGCGATCGCAACATT TERM 4797 5379588 - 5379536 - f 74 -8.3 -3.77071 | overlap 5379534 5379538 5379539 5379570 AAAGATCAATAAATA TACGTAGGGCATCGCCCACCACAAC CAT GATAAAGTAGGCGATGCCCACCCTA TTGGCGATCGCAACA TERM 4798 5379585 - 5379538 - f 70 -8.4 -3.44527 | gap 1, overlap 5379536 5379534 5379539 5379570 AGATCAATAAATATA CGTAGGGCATCGCCCACCACAAC CAT GATAAAGTAGGCGATGCCC-ACC CTATTGGCGATCGCA TERM 4799 5379584 - 5379539 - f 83 -11.9 -2.65632 | gap 1, overlap 5379538 5379536 5379534 5379570 GATCAATAAATATAC GTAGGGCATCGCCCACCACAAC CAT GATAAAGTAGGCGATGCCC-AC CCTATTGGCGATCGC TERM 4800 5379584 - 5379570 - f 76 -7.8 -4.03093 | overlap 5379539 5379538 5379536 5379534 CACAACCATGATAAA GTAGGC GAT GCCCAC CCTATTGGCGATCGC TERM 4801 5379704 - 5379718 + F 100 -11.4 -5.77853 | opp_overlap 5379704 ATAAATTTCAGCAAA GGGGCT AAT AGCCCC TTTTTTTTACCCATT TERM 4802 5379718 - 5379704 - f 91 -11.4 -3.78351 | opp_overlap 5379704 ATAAATTTCAGCAAA GGGGCT AAT AGCCCC TTTTTTTTACCCATT Ava_4293 5380076 - 5380498 + | response regulator receiver domain-containing protein Ava_4294 5380689 - 5380510 - | hypothetical protein uvrC 5381332 - 5383215 + | excinuclease ABC subunit C TERM 4803 5384617 - 5384651 + F 75 -9.5 -3.14284 | gap 1, opp_overlap 5384628, overlap 5384616 5384620 ACACCATTTATTCTG GATTTTAGAGACGTTG TATG CAACGTCTCTAC-ATC ATTTATTGGTGCAAC TERM 4804 5384620 - 5384649 + F 87 -12.3 -3.12942 | opp_overlap 5384628, overlap 5384617 5384616 CCATTTATTCTGGAT TTTAGAGACGTTG TATG CAACGTCTCTACA TCATTTATTGGTGCA TERM 4805 5385500 - 5385514 + G 71 -4.2 -4.8543 | opp_overlap 5385509, overlap 5385506 5385509 GGTGGAATATGTTTG TGGCAA CGA TCGCCA TTTTTGTGGCGATTA TERM 4806 5385506 - 5385529 + G 70 -3.8 -4.78764 | opp_overlap 5385509, overlap 5385500 5385509 ATATGTTTGTGGCAA CGATCGCCAT TTTT GTGGCGATTA TTTTTGGTCAGTTTG TERM 4807 5385509 - 5385526 + G 82 -7.7 -4.4831 | opp_overlap 5385509, overlap 5385500 5385506 TGTTTGTGGCAACGA TCGCCAT TTTT GTGGCGA TTATTTTTGGTCAGT Ava_4296 5385325 - 5385825 + | hypothetical protein Ava_4297 5385822 - 5386427 + | hypothetical protein Ava_4298 5386452 - 5387366 + | cytochrome C oxidase subunit II, transmembrane region TERM 4808 5387768 - 5387781 + G 70 -8.1 -3.71998 | CGCCTTCTGGATGGT TCCCG TAGT CGGGA TTCTCTTGATGGCTA TERM 4809 5387991 - 5388007 + G 71 -4.3 -4.78326 | overlap 5387979 CGTGCGCCAGGAATG GGCTTCT TTC GGATGCC TTTGTTTGTTTGGGC TERM 4810 5388474 - 5388495 + G 71 -2.3 -5.10033 | gap 1, overlap 5388474 5388476 CTCAACACCCCCATG TT-GTTCGCC TTG GGTGGACTAA TTTTATTTGTCTTCG Ava_4299 5387391 - 5389058 + | cytochrome c oxidase, subunit I TERM 4811 5389470 - 5389457 - g 71 -6.7 -4.08692 | opp_overlap 5389456 5389457 5389467, overlap 5389467 GAACTTGCCCTAAAA CGCAA AAAC TTGCG GTTATTTCGCATCTT Ava_4300 5389169 - 5389783 + | cytochrome c oxidase subunit III TERM 4812 5389857 - 5389830 - f 78 -11.3 -2.62332 | opp_overlap 5389830, overlap 5389822 5389826 AAATTAACCAATTCA GCAGAGCCAGC GTATTG GGTGGCTCTGC TTTATGCTTGTCTTG TERM 4813 5389830 - 5389857 + F 89 -11.3 -4.14004 | opp_overlap 5389822 5389830 5389826 AAATTAACCAATTCA GCAGAGCCAGC GTATTG GGTGGCTCTGC TTTATGCTTGTCTTG Ava_4301 5390012 - 5390644 + | hypothetical protein TERM 4814 5390690 - 5390652 - T 77 -9.8 -3.17146 | gap 1, opp_overlap 5390652 5390655, overlap 5390650 5390655 TTTCCTGAGAACAGA TAAGTGCTGAATA-GGC TAAAGC GCCACACTCAGCACTTA TTACTCACTTACTAG Ava_4302 5391315 - 5390695 - | hypothetical protein rpsD 5391503 - 5392111 + | 30S ribosomal protein S4 TERM 4815 5392558 - 5392569 + F 81 -3 -5.71712 | TTGGGTGGAACGCTA TCAT CTGC ATGA TTTTTTTATCTACAG Ava_4304 5392788 - 5393834 + | phosphonate-binding periplasmic protein Ava_4305 5393831 - 5395615 + | periplasmic sensor Signal transduction histidine kinase TERM 4816 5395718 - 5395688 - T 71 -4.7 -4.64766 | TGTACATTTTAAAAA CTGCCCTTGGA TGAAGAAAT TCCCAGAGCAG TAATAAATCAATTCA Ava_4306 5396072 - 5395752 - | hypothetical protein TERM 4817 5395850 - 5395840 - G 70 -5.4 -4.46926 | CACCGGAGTACAAAA GTTG AAA CAAC CGCTAAAACTGTGCT Ava_4307 5396660 - 5397208 + | pentapeptide repeat-containing protein TERM 4818 5398253 - 5398237 - g 80 -8.7 -3.96506 | overlap 5398232 TACGGCAAAACAGAA TCTCGCC CAG GGCGAAA ACTCGGACACGTCAC Ava_4308 5397205 - 5398347 + | phosphoribosylaminoimidazole carboxylase ATPase subunit TERM 4819 5398619 - 5398605 - f 71 -8.6 -3.16068 | opp_overlap 5398605 5398610, overlap 5398604 CGGTGAACTCAAAAT CTTTGG CTC CCAAAG TTTAGTTAAAACTCT TERM 4820 5398605 - 5398619 + F 80 -8.6 -3.91352 | opp_overlap 5398605 5398604, overlap 5398610 CGGTGAACTCAAAAT CTTTGG CTC CCAAAG TTTAGTTAAAACTCT TERM 4821 5398610 - 5398640 + F 95 -12.7 -4.20454 | opp_overlap 5398605 5398604, overlap 5398605 5398622 5398625 AACTCAAAATCTTTG GCTCCCAAAGTTT AGTTA AAACTCTGGGAGC TTTAATTATTTATTA Ava_4309 5398919 - 5400160 + | peptidase M16-like TERM 4822 5401320 - 5401308 - g 82 -4.9 -5.26119 | opp_overlap 5401308 CTGCTAAAAACAAAA TATTG GGA CAATA TGCCTTAGGTAAACA Ava_4310 5400248 - 5401531 + | peptidase M16-like TERM 4823 5401685 - 5401668 - f 80 -11.3 -3.14683 | opp_overlap 5401670 5401682 ACATCCTTGGATGAA GACGCGA TTCA TCGCGTC TCTACAGATGGTTTA TERM 4824 5402562 - 5402592 + G 70 -2.7 -5.02074 | opp_overlap 5402562 AGAATTCCGAAGTTA CCAAGCT-ACAGCAA AGA TTGA-GTCAGCTTGG TTTTTTAAAGGGTGG Ava_4311 5401829 - 5402746 + | peptidoglycan binding domain-containing protein Ava_4312 5402908 - 5403261 + | membrane protein of unknown function TERM 4825 5403440 - 5403430 - T 73 -5.4 -4.62069 | CCGGTAGGCGAAAAA TCCT TTT AGGA ACCAACAACTTCACC Ava_4314 5405892 - 5404612 - | ankyrin Ava_4315 5406096 - 5406566 + | hypothetical protein TERM 4826 5406578 - 5406618 + T 100 -14.3 -3.18467 | opp_overlap 5406585 5406587, overlap 5406573 5406578 TTAGTCATTAGTCAT TAGTCAATAGTCATTAGTC ATT GGTTATTGACTATTGACTA TTAACTTACCGCTTT Ava_4316 5407289 - 5406624 - | hypothetical protein Ava_4317 5407465 - 5408121 + | 3-beta hydroxysteroid dehydrogenase/isomerase TERM 4827 5408205 - 5408169 - f 85 -11.7 -3.42366 | overlap 5408161 TGGAAAAGGGTATAA GGGTATAGGGGTATAAA TCT TTTAAACCCTTACACCC AGCCTCAACAGAAAA TERM 4828 5408749 - 5408762 + G 70 -5.3 -4.45399 | opp_overlap 5408749, overlap 5408743 GCTATCACCCTAAAC CATCA CAAA TGATG TTTTGGTCTTCCTAT Ava_4318 5408283 - 5409014 + | glycoside hydrolase family protein Ava_4319 5409848 - 5409015 - | Alpha/beta hydrolase fold Ava_4320 5410502 - 5409963 - | hypothetical protein Ava_4321 5410667 - 5411185 + | bifunctional deaminase-reductase-like TERM 4829 5411226 - 5411192 - T 100 -7.2 -5.86965 | opp_overlap 5411192, overlap 5411194 ACTTACTAAAAAAAA TCGATTCTCGACTTAT TAT AAAAGTCGGGAATCCA TATAAAAACTAAGGT TERM 4830 5411224 - 5411194 - T 76 -9.8 -3.05247 | opp_overlap 5411192, overlap 5411192 TTACTAAAAAAAATC GATTCTCGACTTAT TAT AAAAGTCGGGAATC CATATAAAAACTAAG Ava_4322 5411636 - 5411235 - | hypothetical protein TERM 4831 5411922 - 5411869 - H 100 -13.9 -3.30124 | CTTGATTTTTGATAA GTAGGGTGGGCAATGCCCACCAA GGTCATGA TAGGGTGGCATTGCCCATCCTAC AGATACTCAGACTTT Ava_4323 5412073 - 5413290 + | peptidase S1 and S6, chymotrypsin/Hap TERM 4832 5413315 - 5413342 + F 100 -12.2 -5.48514 | opp_overlap 5413319 AGGTTAATCCATGAG TATAGGGGTGTT TTTT AATACCCCTATA TTTTTATTTGTTAGT TERM 4833 5413744 - 5413764 + G 71 -8.3 -3.53012 | opp_overlap 5413743 5413740 AGTTCGGAAATGCAG TTGGGGAAA ATA TTACCCCAA TTTCCCCGCGAAAAA TERM 4834 5414475 - 5414450 - g 71 -6.8 -4.20918 | opp_overlap 5414450 5414452 CTCAATGGGAACAAA CCCCCGGACA AGTAAA TATCCGGGTG ATTTTATGGCTGTTA Ava_4324 5413534 - 5414715 + | aldo/keto reductase TERM 4835 5414991 - 5415017 + F 100 -13.8 -5.1963 | opp_overlap 5414989 TCACACCATACCATC TCCCTCTGTTTG TTC CACACAGAGGGA TTTTTCTTGGTTGGA TERM 4836 5415948 - 5415926 - g 73 -8.5 -3.72027 | overlap 5415946 ATTTTTCAGCAATAA GCACTTGTG GTTGT CACAAGTAC ACCCTGACGATGTAG TERM 4837 5419705 - 5419690 - g 76 -7.6 -4.1822 | TCTTACTGCAAGAAA TTCACC ATCG GGTGAA AAACAATTTAGGAAT TERM 4838 5420024 - 5420067 + G 75 -9 -3.6053 | gap 1, opp_overlap 5420033 ACTGGTATCTAATGC CTTGAAATACGCTTTTCCCGA TAA TCGGG-AAGGTGAAGTTCAAG TTCGTTTATACCAAC Ava_4325 5415312 - 5420276 + | Signal transduction histidine kinase Ava_4326 5420279 - 5421994 + | PAS/PAC sensor hybrid histidine kinase TERM 4839 5422121 - 5422099 - T 81 -9.2 -3.78793 | overlap 5422100 5422102 CATAACTACTAATAA GGACTGTTGA CTG TCAACAGTCA TAGCTGAAATTGATA TERM 4840 5422120 - 5422100 - T 86 -12.7 -2.86553 | overlap 5422099 5422102 ATAACTACTAATAAG GACTGTTGA CTG TCAACAGTC ATAGCTGAAATTGAT TERM 4841 5422118 - 5422102 - T 74 -9.5 -2.97365 | overlap 5422100 5422099 AACTACTAATAAGGA CTGTTGA CTG TCAACAG TCATAGCTGAAATTG TERM 4842 5422283 - 5422311 + T 89 -6.1 -5.37345 | gap 1, opp_overlap 5422283, overlap 5422286 AAATTAAAATCTAAA TCTTCCCATTGC TACAAT GCAA-GGGGAGA TTTTTTATGATTAAA TERM 4843 5422434 - 5422404 - T 86 -9.9 -4.13037 | gap 1, opp_overlap 5422410, overlap 5422410 ATAAATACTAAATAA CTAATAGCCCGATT GCCC AACCGGGCT-TTAG CTCCATACTCCCCCC TERM 4844 5422429 - 5422410 - T 78 -10 -3.38738 | opp_overlap 5422410, overlap 5422404 ACTAAATAACTAATA GCCCGATT GCCC AACCGGGC TTTAGCTCCATACTC TERM 4845 5422410 - 5422429 + T 72 -7.8 -3.67296 | opp_overlap 5422410 5422404 ACTAAATAACTAATA GCCCGATT GCCC AACCGGGC TTTAGCTCCATACTC TERM 4846 5422443 - 5422472 + T 76 -7.8 -4.15222 | GCTTTAGCTCCATAC TCCCCCCATGTT TTACCT GGCAAGGGGGGA TTTATTACACAAAAT Ava_4327 5423413 - 5422550 - | hypothetical protein TERM 4847 5423572 - 5423541 - H 83 -11.8 -3.02739 | opp_overlap 5423542 5423548, overlap 5423548 CCGAAGTCAGATATA GCAAAAACTATGCT AATT AGCATAGTTTTTGT GTTGACAGTTAACTG TERM 4848 5423542 - 5423571 + H 100 -15.3 -3.0644 | opp_overlap 5423541 5423548, overlap 5423548 CGAAGTCAGATATAG CAAAAACTATGCT AATT AGCATAGTTTTTG TGTTGACAGTTAACT TERM 4849 5423565 - 5423548 - H 95 -8.5 -4.86133 | opp_overlap 5423542 5423548, overlap 5423541 CAGATATAGCAAAAA CTATGCT AATT AGCATAG TTTTTGTGTTGACAG TERM 4850 5423548 - 5423565 + H 100 -8.5 -5.0916 | opp_overlap 5423548 5423541, overlap 5423542 CAGATATAGCAAAAA CTATGCT AATT AGCATAG TTTTTGTGTTGACAG Ava_4328 5424019 - 5424903 + | Short-chain dehydrogenase/reductase SDR TERM 4851 5425308 - 5425292 - g 75 -8.7 -3.64822 | AGTGCTGGATTTAAA CTACGGC AAA ACCGTAG CGCGGGCGAATAACT TERM 4852 5425597 - 5425628 + G 70 -5.8 -4.25016 | gap 1, overlap 5425598 CTTTACACCCAGTTG TCCGCGTCCATCCTG AAT CAGGG-GAACGTGGG TTATTTATTGGTGGT Ava_4329 5425029 - 5425946 + | taurine catabolism dioxygenase TauD/TfdA TERM 4853 5426123 - 5426088 - f 79 -10.6 -3.12432 | opp_overlap 5426090, overlap 5426086 5426084 AAAGGAGTGAATACA GGGAGAAAAGCAGAAA TTTT TCTCTAATTTTCTCCC CATCTCCTCATCCCC TERM 4854 5426695 - 5426715 + G 86 -7.6 -4.65933 | AAGATGACGCTTTTA TCCTCGAT AAAGA ATCGGGGA TTTATTTTGAGCATG Ava_4330 5426157 - 5427530 + | xenobiotic compound monooxygenase A subunit TERM 4855 5427846 - 5427860 + G 77 -3.6 -5.2112 | TGGATATGTGAAACC GGATTT GCC AAATTC TTTTTTGCTGATGTT Ava_4331 5427730 - 5428680 + | hypothetical protein Ava_4332 5428821 - 5429540 + | ThiJ/PfpI Ava_4333 5429587 - 5430243 + | HAD family hydrolase Ava_4334 5431479 - 5430427 - | histidinol phosphate aminotransferase Ava_4335 5431520 - 5432284 + | trans-aconitate 2-methyltransferase TERM 4856 5432356 - 5432311 - f 74 -9.3 -2.94747 | gap 1, opp_overlap 5432320, overlap 5432320 CTATTGGATTAGAGA TACTAAAAAGGCGCTCTC TAATAAATAAC GAGAGCGCCTTTTC-GTA AAAATAGAACCTGGC TERM 4857 5432320 - 5432348 + F 83 -8.9 -4.26076 | opp_overlap 5432320 5432311 TAGAGATACTAAAAA GGCGCTCTC TAATAAATAAC GAGAGCGCC TTTTCGTAAAAATAG TERM 4858 5432348 - 5432320 - f 100 -8.9 -4.86133 | opp_overlap 5432320, overlap 5432311 TAGAGATACTAAAAA GGCGCTCTC TAATAAATAAC GAGAGCGCC TTTTCGTAAAAATAG TERM 4859 5432671 - 5432683 + F 71 -9.1 -3.1634 | AGCACTCATCTTGAG GTGGG CTT CCCAC TTAGATGCTTTCAGC TERM 4860 5434038 - 5434066 + F 75 -9.5 -3.23274 | opp_overlap 5434035, overlap 5434034 5434065 AGAGTGGACGAACCT GGCTCTGGAACCC TTA GGGTTTCGGGGCA TTGGATTCTCACCAA TERM 4861 5434858 - 5434869 + F 75 -7.2 -4.2354 | ATGTTCTATTTCACT CCCC TTGC GGGG TTCTTTTCACCTTTC TERM 4862 5436316 - 5436302 - f 75 -5.6 -4.8622 | GCTGGCAACTAAAAA CGAGGG TTG CGCTCG TTGCGGGACTTAACC TERM 4863 5437404 - 5437418 + F 85 -2.8 -5.92399 | TGACTGCTCTTTATC CACC TCAGCCT GGTG TTTTTTATTTTCTTG TERM 4864 5438224 - 5438240 + G 70 -3.7 -4.82901 | overlap 5438226 TCATTGGACAGATGA TATTACC TAT GGTGATG TTTTTCTGCAAAACG glyQ 5437679 - 5438563 + | glycyl-tRNA synthetase subunit alpha TERM 4865 5438882 - 5438895 + G 86 -3.1 -5.61881 | TTGCTCATCGACAAT TAGCA CCGT TGCTG TTTTTATTTTTAGCG Ava_4337 5438668 - 5439153 + | hypothetical protein TERM 4866 5439178 - 5439201 + F 100 -13.2 -4.04206 | opp_overlap 5439177 5439182, overlap 5439182 ACAACATTTATAATT CAAAGCCTGC ACAC GCGGGCTTTG TTTGTATAAACCTGA TERM 4867 5439182 - 5439197 + F 88 -8.2 -4.62441 | opp_overlap 5439182 5439177, overlap 5439178 CATTTATAATTCAAA GCCTGC ACAC GCGGGC TTTGTTTGTATAAAC TERM 4868 5440731 - 5440746 + G 71 -6.8 -4.19258 | ATTTTCAGCCAGTTA CCAGGG AATT CCTTGG TTTTGGGTAGCATCT Ava_4338 5439216 - 5441612 + | ComEC/Rec2-related protein Ava_4339 5442601 - 5441651 - | glucokinase Ava_4340 5443686 - 5444663 + | hypothetical protein Ava_4341 5445286 - 5444774 - | hypothetical protein Ava_4342 5447273 - 5445393 - | ABC transporter, transmembrane region TERM 4869 5447215 - 5447232 + g 71 -3.4 -4.99645 | opp_overlap 5447208, overlap 5447216 GAAAACAGCCGCCAG TCGTTG TTACGC CAACGG TTTTGTTTATAAGAT Ava_4343 5449909 - 5447630 - | PAS/PAC sensor hybrid histidine kinase Ava_4344 5450355 - 5449915 - | response regulator receiver domain-containing protein Ava_4345 5453030 - 5450358 - | multi-sensor Signal transduction histidine kinase TERM 4870 5450704 - 5450739 + g 93 -12.6 -3.1372 | gap 1, overlap 5450708 GCCTCCCCTGCCCCC GAAGTTCGCCCGGAGGG AAA CCCTCCTTGCG-ACTTC TCTTCCTGCCCCCTG TERM 4871 5450708 - 5450736 + g 75 -8.7 -3.71284 | overlap 5450704 CCCCTGCCCCCGAAG TTCGCCCGGAGGG AAA CCCTCCTTGCGAC TTCTCTTCCTGCCCC TERM 4872 5451474 - 5451486 + g 73 -9.1 -3.52906 | overlap 5451472 TACTATGGCACTGAC TCGCC CTT GGCGA TATTTATCGACGTAA hisG 5453994 - 5453338 - | ATP phosphoribosyltransferase catalytic subunit TERM 4873 5454214 - 5454236 + G 72 -9.2 -3.08522 | opp_overlap 5454216, overlap 5454213 5454216 GTAGTGAAATGGCAA CAGTAGGTAA TTA TGACCTACTG ATTTTAGACTGGATG Ava_4347 5454075 - 5454785 + | two component transcriptional regulator TERM 4874 5454818 - 5454795 - T 100 -9.6 -4.95167 | opp_overlap 5454793 5454805, overlap 5454797 GAATGAATAAGAAAA TACCCTGGTA TTTC TACCAGGGTG GAAATTTTCTCTAGC TERM 4875 5454816 - 5454797 - T 93 -12.2 -4.07486 | opp_overlap 5454793 5454805, overlap 5454795 ATGAATAAGAAAATA CCCTGGTA TTTC TACCAGGG TGGAAATTTTCTCTA TERM 4876 5454805 - 5454822 + T 71 -4.9 -4.59984 | opp_overlap 5454797 5454795, overlap 5454793 GAAAATACCCTGGTA TTTCTAC CAGG GTGGAAA TTTTCTCTAGCTTTT Ava_4348 5457348 - 5454904 - | UvrB/UvrC protein TERM 4877 5456016 - 5456028 + g 76 -7.7 -4.18161 | TTTCTAGGGCAATTT CTTCG TCA CGAAG TTTTGCGGCTTTATC TERM 4878 5457382 - 5457401 + H 71 -5 -4.70613 | TGCTGCTTGGACTTT GGGTGA TAGAAAAT TCACCC TTTTGTTAAACTTTT Ava_4349 5457581 - 5457877 + | hypothetical protein Ava_4350 5458640 - 5457918 - | biotin/lipoate A/B protein ligase Ava_4351 5459137 - 5458658 - | hypothetical protein Ava_4352 5460331 - 5459546 - | hypothetical protein TERM 4879 5460514 - 5460545 + r 79 -5.2 -5.09259 | gap 1 TGTCGAGTTAAAGTT GTACTGGCAAAGGTT CCC AAACTTCGCC-GTAC TTTTCTTTTAAAGTG Ava_4353 5460910 - 5460506 - | hypothetical protein TERM 4880 5460780 - 5460800 + g 71 -3.4 -4.98672 | gap 1, opp_overlap 5460785 GCATATTTACCTTTA GCTAATTCT GCAT AGAAT-AGC TTTTCTATTTTTCCC Ava_4354 5461944 - 5460991 - | PhoH-like protein TERM 4881 5462210 - 5462187 - R 75 -9.6 -3.23638 | opp_overlap 5462187 TTAAATATTTATCAA GTAGAGACGC AATA ACGTCTCCAC TTTTTCCAGGTTTGA TERM 4882 5462187 - 5462210 + r 78 -6.7 -4.64657 | opp_overlap 5462187 TTAAATATTTATCAA GTAGAGACG CAATAA CGTCTCCAC TTTTTCCAGGTTTGA rpsU 5462480 - 5462304 - | 30S ribosomal protein S21 TERM 4883 5462332 - 5462360 + g 74 -4.5 -4.90217 | overlap 5462326 5462333 5462336 CCCTTGCGTGCAGCT TCTGCTTTGCGCT TGC GGCGCAAACTGGG TTTTTCGTATCTTTC TERM 4884 5462718 - 5462728 + r 80 -6.8 -4.87318 | ATATGTGAAAAGCTT GCTG AAT CAGC TTTTTGAATTTTGAA Ava_4356 5463096 - 5462758 - | hypothetical protein rpsP 5463415 - 5463155 - | 30S ribosomal protein S16 Ava_4358 5465057 - 5463585 - | signal recognition particle subunit FFH/SRP54 (srp54) TERM 4885 5464765 - 5464788 + g 73 -5.3 -4.63932 | ACAATTGTGGGCTTT TGTTCCACT TCCGCC AGAGGAACA TTTTCTTCCCCCATC TERM 4886 5465345 - 5465287 - H 73 -8.9 -3.44924 | gap 2, opp_overlap 5465289 5465289 5465290, overlap 5465288 GAAATTATTTAAATA TCTGTAGGGTGGGCATTGCCCACCAAAGC CAT GATACGGTAGGCGATGCCCATCCTAC-G- TATATTTCAAAAATC TERM 4887 5465345 - 5465288 - H 95 -14.9 -2.66232 | gap 1, opp_overlap 5465289 5465289 5465290, overlap 5465287 AAATTATTTAAATAT CTGTAGGGTGGGCATTGCCCACCAAAGC CAT GATACGGTAGGCGATGCCCATCCTAC-G TATATTTCAAAAATC TERM 4888 5465289 - 5465345 + H 100 -17.3 -3.24708 | opp_overlap 5465287 5465288, overlap 5465289 5465290 AATTATTTAAATATC TGTAGGGTGGGCATTGCCCACCAAAGC CAT GATACGGTAGGCGATGCCCATCCTACG TATATTTCAAAAATC TERM 4889 5465290 - 5465344 + H 100 -18.6 -2.54504 | opp_overlap 5465287 5465288, overlap 5465289 5465289 ATTATTTAAATATCT GTAGGGTGGGCATTGCCCACCAAAGC CAT GATACGGTAGGCGATGCCCATCCTAC GTATATTTCAAAAAT TERM 4890 5466453 - 5466443 - g 85 -4 -5.52986 | AGGGCAGGAAAAAAA GAAT ACT ATTC CCTCATCTTTCCTTA Ava_4359 5465456 - 5466733 + | hypothetical protein TERM 4891 5467049 - 5467036 - g 77 -3.8 -5.23316 | GAGTATATGAAAAAA TGCG TCTCTT CGCA AGCTCTTTAGTAGAT Ava_4360 5466801 - 5467793 + | hypothetical protein TERM 4892 5467864 - 5467876 + F 76 -3.5 -5.27335 | CACTCTGAGTTTTAG TTAAT TAG ATTAA TTTTTATTTAAAGGA Ava_4361 5468018 - 5469334 + | extracellular ligand-binding receptor Ava_4362 5469452 - 5470612 + | inner-membrane translocator Ava_4363 5470652 - 5471770 + | inner-membrane translocator Ava_4364 5471745 - 5472485 + | ABC transporter-like Ava_4365 5472587 - 5473285 + | ABC transporter-like Ava_4366 5474785 - 5473418 - | peptidase M24 TERM 4893 5474096 - 5474079 - G 79 -7.7 -4.24342 | TCGGCTAGTAATAAA TCCCCTG GTTG CAGAGGA TGGTGATATTGTTCG TERM 4894 5475165 - 5475196 + G 74 -8 -3.99324 | gap 1, opp_overlap 5475193 TGATGGTTTTAATCT GCGGTGGTTCACGCC GAC GGTG-GAAGTACCGC TTTGTGGTCATGCAA Ava_4367 5474989 - 5475783 + | phenazine biosynthesis PhzC/PhzF protein TERM 4895 5475797 - 5475854 + F 95 -14.9 -2.52291 | opp_overlap 5475805 5475812, overlap 5475806 AACGCAAAGGGGCGC AGAGGTAAGCGCAAAGGTACGCAAAGA AAAT TCTCCGCGTTCCCTTGCGTTTACCTCC GTGTTCCTCTGCGTT TERM 4896 5475846 - 5475805 - f 87 -12.3 -3.12351 | opp_overlap 5475797 5475806, overlap 5475812 GGGGCGCAGAGGTAA GCGCAAAGGTACGCAAAGA AAAT TCTCCGCGTTCCCTTGCGT TTACCTCCGTGTTCC TERM 4897 5475806 - 5475845 + F 81 -9.2 -3.68506 | opp_overlap 5475805 5475812, overlap 5475797 GGGCGCAGAGGTAAG CGCAAAGGTACGCAAAGA AAAT TCTCCGCGTTCCCTTGCG TTTACCTCCGTGTTC TERM 4898 5475839 - 5475812 - f 74 -8.4 -3.67417 | opp_overlap 5475806 5475797, overlap 5475805 AGAGGTAAGCGCAAA GGTACGCAAAGA AAAT TCTCCGCGTTCC CTTGCGTTTACCTCC Ava_4368 5475918 - 5476361 + | hypothetical protein Ava_4369 5477109 - 5476495 - | TetR family transcriptional regulator TERM 4899 5477290 - 5477320 + G 80 -10.4 -3.54653 | CGTTCAATATCGCGT CGGCTGTTGGCAAC CTT GATGGCAACAGTCG TTATATGGTGGGGAT Ava_4370 5477260 - 5478846 + | peptidase M16-like Ava_4371 5478863 - 5480401 + | peptidase M16-like TERM 4900 5480438 - 5480475 + F 100 -14.5 -4.25104 | opp_overlap 5480435 5480441 5480444, overlap 5480441 ATTCCTATAAATGGA TAATAATCCCAGTTTTT CTAG AGAAACTGGGATTATTG TTTTGCTGAGGACAA TERM 4901 5480472 - 5480441 - f 87 -11.8 -3.50047 | opp_overlap 5480438 5480441, overlap 5480435 5480444 CCTATAAATGGATAA TAATCCCAGTTTTT CTAG AGAAACTGGGATTA TTGTTTTGCTGAGGA TERM 4902 5480441 - 5480472 + F 100 -14 -4.25256 | opp_overlap 5480435 5480441 5480444, overlap 5480438 CCTATAAATGGATAA TAATCCCAGTTTTT CTAG AGAAACTGGGATTA TTGTTTTGCTGAGGA TERM 4903 5480469 - 5480444 - f 80 -9.1 -3.87597 | opp_overlap 5480441 5480438, overlap 5480435 5480441 ATAAATGGATAATAA TCCCAGTTTTT CTAG AGAAACTGGGA TTATTGTTTTGCTGA Ava_4372 5480683 - 5480940 + | hypothetical protein TERM 4904 5480974 - 5481011 + F 100 -10.9 -5.4505 | overlap 5480952 CTAATATTTAGGATG TCGTGTATTTTGATG AAAACTAA TATCAAAATACACGA TTTTTTATTGCGCGA Ava_4373 5481577 - 5481819 + | hypothetical protein Ava_4374 5481965 - 5482207 + | hypothetical protein Ava_4375 5482353 - 5482589 + | hypothetical protein Ava_4376 5482703 - 5482939 + | hypothetical protein Ava_4377 5483049 - 5483285 + | hypothetical protein TERM 4905 5483324 - 5483351 + F 76 -9.3 -3.4285 | AAGATTATGGCATCA GCGATTAAGCA ATATCA TGTTTAATCGC TTGTAAATTCCATCA Ava_4378 5484232 - 5485404 + | hypothetical protein Ava_4379 5485630 - 5486712 + | hypothetical protein Ava_4380 5486864 - 5487145 + | HepP protein, formation of heterocysts-like Ava_4381 5488101 - 5487319 - | hypothetical protein TERM 4906 5488344 - 5488389 + r 71 -6.9 -3.82486 | gap 1, opp_overlap 5488355 5488356, overlap 5488356 ACAAGGAAAGGGAAG TAATTGTCAAAGCCTCTCCCCG CGT CGGGGAGAGG-TTTGAAGAGGG TTGTTGGTATTACCT TERM 4907 5488379 - 5488355 - R 100 -15.7 -3.62478 | opp_overlap 5488344 5488356, overlap 5488356 GAAGTAATTGTCAAA GCCTCTCCCCG CGT CGGGGAGAGGT TTGAAGAGGGTTGTT TERM 4908 5488356 - 5488378 + r 100 -19.2 -3.54638 | opp_overlap 5488355 5488356, overlap 5488344 AAGTAATTGTCAAAG CCTCTCCCCG CGT CGGGGAGAGG TTTGAAGAGGGTTGT TERM 4909 5488378 - 5488356 - R 100 -19.2 -2.77005 | opp_overlap 5488356 5488344, overlap 5488355 AAGTAATTGTCAAAG CCTCTCCCCG CGT CGGGGAGAGG TTTGAAGAGGGTTGT Ava_4382 5489964 - 5488417 - | secretion protein HlyD TERM 4910 5489063 - 5489093 + g 84 -9.8 -3.80862 | overlap 5489064 CGGAGTTTTGCTTGT TCAATGTCAGCTAA GGT TTGGCTGACAGTGG TTTGATAATGGCTTT TERM 4911 5489064 - 5489092 + g 77 -11.1 -2.87794 | overlap 5489063 GGAGTTTTGCTTGTT CAATGTCAGCTAA GGT TTGGCTGACAGTG GTTTGATAATGGCTT Ava_4383 5493269 - 5490234 - | bacteriocin-processing peptidase TERM 4912 5492943 - 5492933 - G 71 -6.8 -4.09739 | TCAACTCTTGTAAAA TCCC TTG GGGA AGGTAACCCACTTTC TERM 4913 5493232 - 5493208 - G 75 -8.6 -3.85698 | opp_overlap 5493210, overlap 5493210 TCCCGTCCTGACAAA GACTCACCCA GTATA TGGGTGAGTT GTTCCGCTAAATATT TERM 4914 5493210 - 5493230 + g 84 -11.2 -3.65522 | opp_overlap 5493208 5493210 CCGTCCTGACAAAGA CTCACCCA GTATA TGGGTGAG TTGTTCCGCTAAATA TERM 4915 5493230 - 5493210 - G 83 -11.2 -3.51934 | opp_overlap 5493210, overlap 5493208 CCGTCCTGACAAAGA CTCACCCA GTATA TGGGTGAG TTGTTCCGCTAAATA TERM 4916 5493414 - 5493449 + r 90 -12 -3.51232 | opp_overlap 5493425, overlap 5493410 5493417 ACGCACTTTATTCTT TACTGTAGAGACGTTG CATG CAACGTCTCTACATCA TTCATTTGGCGCAAC TERM 4917 5493417 - 5493446 + r 100 -18.1 -2.89569 | opp_overlap 5493425, overlap 5493414 5493410 CACTTTATTCTTTAC TGTAGAGACGTTG CATG CAACGTCTCTACA TCATTCATTTGGCGC Ava_4384 5494150 - 5493560 - | hypothetical protein TERM 4918 5494447 - 5494433 - R 83 -7.2 -4.75309 | opp_overlap 5494433 5494435 GCAAACCTAACAAAA TATGCT GAT AGCATA TATGTCGTCTCTCCT Ava_4385 5496268 - 5495510 - | hypothetical protein TERM 4919 5496564 - 5496532 - R 100 -7.8 -5.47431 | opp_overlap 5496531 5496530 5496521 5496559 TTAACACATAAAAAA GCTGGAGGCTAA TTAATCGGG TTAGCTTCCAGC AGTTTTAAGAGTTGC aroB 5498173 - 5497082 - | 3-dehydroquinate synthase Ava_4387 5498847 - 5498245 - | hypothetical protein petL 5499029 - 5499124 + | cytochrome b6-f complex subunit PetL TERM 4920 5499241 - 5499212 - T 95 -12.9 -4.07568 | gap 1, opp_overlap 5499213 5499214, overlap 5499213 CCTCTCTCTTGAAAA GTTCTGATCGCCGG AAG CCGGCGCTCAGA-C TTTTCGCTCCGACGC TERM 4921 5499213 - 5499241 + T 100 -13.1 -4.18018 | opp_overlap 5499212 5499213, overlap 5499214 CTCTCTCTTGAAAAG TTCTGATCGCCGG AAG CCGGCGCTCAGAC TTTTCGCTCCGACGC TERM 4922 5499241 - 5499213 - T 93 -13.1 -3.04398 | opp_overlap 5499213 5499214, overlap 5499212 CTCTCTCTTGAAAAG TTCTGATCGCCGG AAG CCGGCGCTCAGAC TTTTCGCTCCGACGC TERM 4923 5499214 - 5499240 + T 100 -16.6 -3.10597 | opp_overlap 5499212 5499213, overlap 5499213 TCTCTCTTGAAAAGT TCTGATCGCCGG AAG CCGGCGCTCAGA CTTTTCGCTCCGACG TERM 4924 5499310 - 5499330 + T 93 -11.9 -4.08064 | TAAAGGTTCTGAAGC CTCTCTCCT TGC AGGGGAGAG TTTTGGAGAGGGGTT Ava_4389 5500400 - 5499393 - | biotin synthase Ava_4390 5501225 - 5500485 - | hypothetical protein Ava_4391 5501515 - 5503155 + | Serine/threonine protein kinase TERM 4925 5503284 - 5503262 - f 74 -5 -4.74706 | TTCAAGATTTAAAAA TAAAAATTAC TGA GTATTTTTTA TATACAAAACTACTA Ava_4392 5503567 - 5503890 + | hypothetical protein TERM 4926 5503935 - 5503893 - f 100 -11.4 -5.00851 | opp_overlap 5503901, overlap 5503894 ACTAAGCAAATAAAA CGTGAACTGTTGACTGTTAA CTG TTGACAGTCAACAGCCCTCA TGATGGATTGTGCAA TERM 4927 5503934 - 5503894 - f 95 -12.7 -3.58884 | opp_overlap 5503901, overlap 5503893 CTAAGCAAATAAAAC GTGAACTGTTGACTGTTAA CTG TTGACAGTCAACAGCCCTC ATGATGGATTGTGCA Ava_4393 5504186 - 5505604 + | coproporphyrinogen III oxidase Ava_4394 5505674 - 5506828 + | saccharopine dehydrogenase TERM 4928 5507182 - 5507172 - f 70 -8.2 -3.29511 | opp_overlap 5507156 5507156 GGTACTCTGCGAGAA CGCC TTT GGCG AACGCGGTAGCGTTC TERM 4929 5507336 - 5507348 + F 75 -10.5 -2.55668 | overlap 5507335 AGTCCCGTAGAGTGC GCCGG CTG CCGGC CTTAGTGTAGCGGTA TERM 4930 5507423 - 5507435 + F 74 -4.8 -4.88918 | opp_overlap 5507422 AACTTTGTCAGAGAG GGGT CTTAA ACCC TTTTATTTACGATAA Ava_4395 5507586 - 5508203 + | hypothetical protein Ava_4396 5509225 - 5508284 - | peptidoglycan binding domain-containing protein Ava_4397 5510558 - 5509704 - | arogenate dehydrogenase TERM 4931 5511865 - 5511852 - g 95 -8.1 -5.1356 | CCTTAGGAATAAAAA CACCC CATC GGGTG AAGGAATTAACAAGT Ava_4398 5510609 - 5512174 + | pentapeptide repeat-containing protein Ava_4399 5512413 - 5512994 + | hypothetical protein TERM 4932 5513084 - 5513027 - f 81 -8.5 -4.23528 | GAACTCAAAATCAAA GGGTTCAGGGGTATAGGGGTATC GGGGTATTGTTT GAAACCCTTACACCCCTATACCC TTACACCCAGTCTCA Ava_4400 5513198 - 5514070 + | hypothetical protein TERM 4933 5514134 - 5514098 - T 76 -6 -4.64598 | gap 2, opp_overlap 5514100 5514101, overlap 5514100 TAAGGACTGGAAAAA CATCTGAGTAGGGTGGGC ATT GCCCACCATA-TCAAA-G TTTACGTCGGCATCA TERM 4934 5514133 - 5514100 - T 85 -9.7 -3.93148 | gap 1, opp_overlap 5514100 5514101, overlap 5514098 AGGACTGGAAAAACA TCTGAGTAGGGTGGGC ATT GCCCACCATA-TCAAA GTTTACGTCGGCATC Ava_4401 5516079 - 5514154 - | multi-sensor Signal transduction histidine kinase Ava_4402 5516586 - 5519129 + | hypothetical protein TERM 4935 5519157 - 5519133 - f 78 -10.9 -2.73735 | overlap 5519137 AAATATCCGTAATTA GTAATTAGTAG CCA CCACTAATTAC GACTGCATAGGAAAC Ava_4403 5519179 - 5522568 + | hypothetical protein TERM 4936 5522790 - 5522770 - f 71 -6.9 -3.84105 | overlap 5522768 TAAAAAAAGGAAATA CTAATGCAG CAC CTACATCAG CTACTAACAACGAAA TERM 4937 5523277 - 5523294 + G 70 -2.7 -5.03715 | AATGCTCAAGGTTTA TGCTTAT CACA AAAAGCA TTTTTTCACAATAAT Ava_4404 5522773 - 5523867 + | hypothetical protein TERM 4938 5523935 - 5523925 - T 70 -8.2 -3.29511 | opp_overlap 5523909 5523909 GGTACTCTGCGAGAA CGCC TTT GGCG AACGCGGTAGCGTTC Ava_4405 5524502 - 5524014 - | hypothetical protein TERM 4939 5524541 - 5524572 + r 91 -9.4 -4.43859 | TTTTTAAATATTGCA GCGATGATCGACGG TCGG TCGTAGAGCATCGC TTTTCTAGACTTATA Ava_4406 5525418 - 5524627 - | hypothetical protein Ava_4407 5525504 - 5526355 + | D12 class N6 adenine-specific DNA methyltransferase TERM 4940 5526382 - 5526395 + TF 73 -5.3 -4.66609 | TATTTCAACCTCGCT TTGAC GACA GTCAA TTTTTCGGTAGGATA Ava_4409 5528552 - 5527464 - | hypothetical protein trpD 5526446 - 5527534 + | anthranilate phosphoribosyltransferase Ava_4410 5528955 - 5530121 + | carbamoyl phosphate synthase small subunit Ava_4411 5530269 - 5530670 + | anti-sigma-factor antagonist domain-containing protein TERM 4941 5530684 - 5530716 + F 80 -8.7 -3.86822 | gap 1, opp_overlap 5530684 5530688 GACCTCATAGAGAGA TTAAGCTAT-CCGA TATTTT TCGGCATAGCTTAA TTTATAGAAAGGTTG TERM 4942 5530716 - 5530684 - f 70 -8.7 -3.05498 | gap 1, opp_overlap 5530684, overlap 5530688 GACCTCATAGAGAGA TTAAGCTAT-CCGA TATTTT TCGGCATAGCTTAA TTTATAGAAAGGTTG TERM 4943 5530760 - 5530740 - f 78 -6.8 -4.57341 | opp_overlap 5530723 AAGGTTGGCGAAAAA CCTCTCTC TGTCT GGGAGAGG TACAAAAGCCAACGA Ava_4412 5531211 - 5531696 + | ribonuclease III Ava_4413 5531795 - 5532778 + | RNA methyltransferase TrmH, group 3 TERM 4944 5532839 - 5532822 - f 81 -2.7 -5.64873 | overlap 5532824 TGTAACAACAAAAAA TAGCAAT CTCT ATTGCTG AACATTCAGTACCAC TERM 4945 5532837 - 5532824 - f 70 -5.3 -4.45127 | overlap 5532822 TAACAACAAAAAATA GCAAT CTCT ATTGC TGAACATTCAGTACC Ava_4414 5532876 - 5533178 + | hypothetical protein Ava_4415 5534158 - 5533271 - | Alpha/beta hydrolase fold Ava_4416 5534627 - 5534217 - | 7-cyano-7-deazaguanine reductase Ava_4417 5535100 - 5534705 - | hypothetical protein Ava_4418 5535637 - 5535257 - | hypothetical protein Ava_4419 5536063 - 5535797 - | hypothetical protein Ava_4420 5536204 - 5536755 + | 2',5' RNA ligase Ava_4421 5536855 - 5537586 + | glycoside hydrolase family protein Ava_4422 5538333 - 5537617 - | Pirin-like TERM 4946 5537882 - 5537895 + g 77 -3.7 -5.19328 | opp_overlap 5537882 5537880 TTAGCAGCTACAAGA CGCAG TTGA CCGCG TTTTTCTTCTGGGGT TERM 4947 5538521 - 5538487 - R 81 -7.3 -4.67608 | gap 1, opp_overlap 5538496, overlap 5538493 TATGGCAATATAAAA TGAAAAGTACG-CACT AAAA AGTGGCGTACTTACCA AAAAGATACTATGAA TERM 4948 5538515 - 5538493 - R 83 -7.1 -4.76874 | gap 1, opp_overlap 5538496, overlap 5538487 AATATAAAATGAAAA GTACG-CACT AAAA AGTGGCGTAC TTACCAAAAAGATAC Ava_4423 5539132 - 5538566 - | DNA starvation/stationary phase protection protein Dps Ava_4424 5539529 - 5540242 + | rubrerythrin Ava_4425 5543247 - 5540605 - | diguanylate cyclase/phosphodiesterase with FHA and GAF sensor TERM 4949 5541036 - 5541062 + g 86 -10.2 -3.87869 | opp_overlap 5541036 5541035 ACTCTGGTGCTAAAC TTGTTTCGGCTA AAA TTGCCGAGACAA TTTCTAGCAAATTGG TERM 4950 5542861 - 5542843 - G 77 -4.6 -4.9792 | CAGCTCAGATAAAAA CGTTGA TAAGTCT TCAACG TCAGCAGATGCAAAA TERM 4951 5543633 - 5543660 + r 86 -10.1 -4.05322 | overlap 5543623 5543641 ATATCTTGCGTTTAT TTACGCAATTT GTGTGA AAATTGCGTAA TTTATATACAAATTT Ava_4426 5545496 - 5543709 - | surface antigen variable number TERM 4952 5543753 - 5543765 + g 71 -9.1 -3.35679 | opp_overlap 5543746 5543742 ATAATCCATTCTCTT GCCAG GTT CTGGC TTGTGAATCAACGGA TERM 4953 5544820 - 5544803 - G 71 -9.9 -2.64099 | overlap 5544802 TCCCTGGACGAGAAC CTGCTGA AAGT TCAGCAG AAAGATTTTGAATCA Ava_4427 5546758 - 5545751 - | zinc-containing alcohol dehydrogenase superfamily protein TERM 4954 5546651 - 5546667 + g 79 -10.9 -3.20858 | opp_overlap 5546645 GTTGAGAACTTCACC TTCCCCA AGT TGGGGAA TTGGTGACTCTACTA TERM 4955 5546779 - 5546766 - H 72 -3.9 -4.99035 | TCAGCCATAGAAAAA TTACT CCAT AGTAA AACTGATGGCCAAAG Ava_4428 5546990 - 5548339 + | Fmu, rRNA SAM-dependent methyltransferase Ava_4429 5548397 - 5548819 + | hypothetical protein TERM 4956 5548887 - 5548909 + T 75 -5.5 -4.76802 | opp_overlap 5548887, overlap 5548906 AATAACTAATTAAGA CTTCGGTTC GCCCA GACCCGGAG TTTCTTCTTTTTCCA Ava_4430 5549108 - 5548881 - | hypothetical protein Ava_4431 5549641 - 5549264 - | response regulator receiver domain-containing protein Ava_4432 5552712 - 5549704 - | PAS/PAC sensor hybrid histidine kinase TERM 4957 5551912 - 5551890 - G 72 -7.8 -3.90744 | TTGTTCCCCAAACAA TTTGGGAACT AGC AGTTACCAAA GAGCGATATCGTTCC Ava_4433 5554747 - 5552705 - | GAF sensor Signal transduction histidine kinase TERM 4958 5552962 - 5552943 - G 74 -7.8 -3.93288 | GTCGAGGGAATGAAA CCATCTGC ATCA GCAGTTGG GGATAATTCGCTTGT TERM 4959 5553838 - 5553885 + g 100 -8.6 -5.22039 | gap 1 TGAAGTTAACTGGAT TGTTGATTTCGTGGGCAACTC CGGCCAT GAGTTGCCC-CAAACTCGACA TTTTTTCGCTTTGGA Ava_4434 5554904 - 5554734 - | hypothetical protein TERM 4960 5554987 - 5554958 - R 93 -6.4 -5.75342 | overlap 5554959 TCTTCCCAAAAAAAA TGGCAGCATAAC GGTAAA GTTAAGCTGCCG TAAAGTAGAAAGTAG TERM 4961 5554986 - 5554959 - R 86 -9.9 -4.04482 | overlap 5554958 CTTCCCAAAAAAAAT GGCAGCATAAC GGTAAA GTTAAGCTGCC GTAAAGTAGAAAGTA Ava_4435 5556116 - 5555049 - | flavin oxidoreductase/NADH oxidase TERM 4962 5555273 - 5555285 + g 83 -9.1 -4.1413 | opp_overlap 5555272 GTTCGGCAAACTGAG CCTGG TAT CCAGG TTTTACAGGTATATT TERM 4963 5557202 - 5557182 - R 100 -9.8 -4.85782 | TTTGCCAAAAATAAA GGACAAGA TTTAC TCTTGTCC TAAATCACAAAAATA TERM 4964 5557312 - 5557322 + r 70 -6.8 -4.05788 | opp_overlap 5557303 5557302 5557312 ACCAACGCTGAGACA CTGC CCA GCAG TTTGCTTTCCAGAAG TERM 4965 5557801 - 5557776 - R 74 -4.7 -4.84529 | GGATAAACTTAAAAA CCCTGTAAACT CTAT AGCTTTCAAGG TTTTCAGTAAGTGCC Ava_4436 5558846 - 5557962 - | hypothetical protein TERM 4966 5559174 - 5559188 + G 75 -5.7 -4.58663 | opp_overlap 5559165, overlap 5559165 AAATCACAGCGCATG GCTGA TTTTT TCAGC TTTTTAGGCGATGCT Ava_4437 5559072 - 5559434 + | ArsR family transcriptional regulator Ava_4438 5560265 - 5559492 - | ABC transporter-like Ava_4439 5561445 - 5560426 - | periplasmic solute binding protein TERM 4967 5561980 - 5561960 - g 71 -4.8 -4.72486 | CAGAAACCTCAAAAA TAGCTAAT GCAGA ACTAGCTA CTCAACAAGAGGTAA Ava_4440 5561827 - 5563422 + | S-layer region-like TERM 4968 5563477 - 5563433 - T 100 -13.8 -3.55622 | opp_overlap 5563433 5563444, overlap 5563444 TCTAATTTCTCTAAA CTCACCAAAAAGACGCAAAG TGATT CTTTGCGTCTTTTTTATGGG TAATTGGTAATAGGT TERM 4969 5563433 - 5563477 + T 100 -13.8 -2.80195 | opp_overlap 5563433 5563444, overlap 5563444 TCTAATTTCTCTAAA CTCACCAAAAAGACGCAAAG TGATT CTTTGCGTCTTTTTTATGGG TAATTGGTAATAGGT TERM 4970 5563444 - 5563466 + T 100 -12.1 -5.28778 | opp_overlap 5563433 5563444, overlap 5563433 TAAACTCACCAAAAA GACGCAAAG TGATT CTTTGCGTC TTTTTTATGGGTAAT TERM 4971 5563466 - 5563444 - T 100 -12.1 -4.78764 | opp_overlap 5563444 5563433, overlap 5563433 TAAACTCACCAAAAA GACGCAAAG TGATT CTTTGCGTC TTTTTTATGGGTAAT Ava_4441 5564018 - 5563545 - | hypothetical protein Ava_4442 5564906 - 5564313 - | hypothetical protein Ava_4443 5566078 - 5565158 - | histone deacetylase superfamily protein Ava_4444 5566395 - 5567465 + | hypothetical protein TERM 4972 5568389 - 5568361 - g 78 -2.4 -5.53991 | opp_overlap 5568341, overlap 5568348 GACTGAGGAAAAAAA CCTCAGCATCGA CTTTC TGGATGATGAAG TACCTAATTTTTATC Ava_4445 5567468 - 5570020 + | hypothetical protein Ava_4446 5570297 - 5570079 - | hypothetical protein Ava_4447 5570730 - 5570906 + | 30S ribosomal protein S21 Ava_4448 5571792 - 5571151 - | peptidyl-tRNA hydrolase Ava_4449 5572101 - 5571829 - | Sec-independent protein translocase TatA TERM 4973 5572483 - 5572469 - R 100 -8.5 -5.71983 | CTAACTACAAAAAAA CCCGG ATAGG CCGGG TGTAGACTAACTAAT Ava_4450 5572716 - 5572528 - | photosystem II reaction center protein H psbN 5572802 - 5572933 + | photosystem II reaction center protein N Ava_4452 5576197 - 5573021 - | glycoside hydrolase family protein TERM 4974 5573615 - 5573626 + g 75 -5.8 -4.63479 | opp_overlap 5573601 5573614 AGCCCAACGTAAAGC TGGG ACTT CCCA TTTTGCTTTATCCTG Ava_4453 5576465 - 5578003 + | hypothetical protein Ava_4454 5579091 - 5578147 - | phospholipid/glycerol acyltransferase Ava_4455 5579232 - 5580077 + | Alpha/beta hydrolase fold TERM 4975 5580361 - 5580341 - T 86 -8.5 -4.45175 | overlap 5580336 TACTAAAAAATTAAA TTTAAACTT TCT AAGTTTAAA GACCTATACTAATCT TERM 4976 5580411 - 5580374 - T 100 -17.3 -3.30028 | opp_overlap 5580374 5580380, overlap 5580380 AAAGACCTATACTAA TCTAAACCCCTTCAAGA ATAA TCCTGAAGGGGTTTAAA TTTGCACCTAGAGAC TERM 4977 5580374 - 5580411 + T 95 -12.9 -3.57144 | opp_overlap 5580374 5580380, overlap 5580380 AAAGACCTATACTAA TCTAAACCCCTTCAAGA ATAA TCCTGAAGGGGTTTAAA TTTGCACCTAGAGAC TERM 4978 5580405 - 5580380 - T 100 -14.1 -3.79787 | opp_overlap 5580374 5580380, overlap 5580374 CTATACTAATCTAAA CCCCTTCAAGA ATAA TCCTGAAGGGG TTTAAATTTGCACCT TERM 4979 5580380 - 5580405 + T 93 -11.9 -3.84719 | opp_overlap 5580380 5580374, overlap 5580374 CTATACTAATCTAAA CCCCTTCAAGA ATAA TCCTGAAGGGG TTTAAATTTGCACCT Ava_4456 5581027 - 5580419 - | cyclase/dehydrase Ava_4457 5583020 - 5580996 - | GAF sensor Signal transduction histidine kinase TERM 4980 5581505 - 5581517 + gr 78 -9.1 -3.72324 | TTAAATTGATGTTTT CCACC CGT GGTGG TTCTTGCTCAGACTC TERM 4981 5582858 - 5582870 + gr 71 -9.1 -3.13522 | overlap 5582859 AGTGGGCTATCTCTT GCAGC ATT GCTGC TGTTGCTGGACGACT TERM 4982 5582934 - 5582948 + gr 78 -8.6 -3.6682 | CTGGGCTGTTTCTTC CTGATG TTG CATCAG TTTGACTGGGTAGGG TERM 4983 5583700 - 5583651 - R 100 -15.9 -3.21466 | opp_overlap 5583660 5583662, overlap 5583632 5583629 5583646 5583653 AACTTATTAAGCTAA TAGCGAATACAGCCTAGTTACTC ATCA GGGCAACTAGGCTGTATTCGGAA AAATGTAAAACTAGC TERM 4984 5583698 - 5583653 - R 100 -18.5 -3.16676 | opp_overlap 5583660 5583662, overlap 5583629 5583651 5583646 CTTATTAAGCTAATA GCGAATACAGCCTAGTTACTC ATCA GGGCAACTAGGCTGTATTCGG AAAAATGTAAAACTA TERM 4985 5583660 - 5583691 + r 100 -13.8 -3.02263 | opp_overlap 5583653 5583651 5583646, overlap 5583662 AGCTAATAGCGAATA CAGCCTAGTTACTC ATCA GGGCAACTAGGCTG TATTCGGAAAAATGT TERM 4986 5583662 - 5583689 + r 78 -10.6 -3.06815 | opp_overlap 5583653 5583651 5583646, overlap 5583660 CTAATAGCGAATACA GCCTAGTTACTC ATCA GGGCAACTAGGC TGTATTCGGAAAAAT Ava_4458 5584046 - 5583711 - | hypothetical protein Ava_4459 5584116 - 5584367 + | hypothetical protein TERM 4987 5584396 - 5584425 + F 100 -12.2 -5.4505 | opp_overlap 5584413 ACGGTCTATTTCTCA CCCCCGCTTC AACCAAACCA GAAGCGGGGG TTTTTTATTAAGGAG TERM 4988 5584916 - 5584898 - g 75 -5.9 -4.58773 | opp_overlap 5584906 5584906 CGTACTAAACCAAAA CCACCAG TCCAC CCGGCGG TAGCTTTTGCAGTCA Ava_4460 5584448 - 5584993 + | HNH endonuclease Ava_4461 5585010 - 5585399 + | hypothetical protein Ava_4462 5585774 - 5585439 - | hypothetical protein lnt 5587387 - 5585801 - | apolipoprotein N-acyltransferase TERM 4989 5587301 - 5587284 - G 90 -11.3 -3.67564 | overlap 5587274 AACCATGCAGCGAAA GGGGCTA CAGT TAGCCCC ATGAAGATGCCACTA Ava_4464 5589986 - 5587368 - | DNA gyrase subunit A Ava_4465 5592114 - 5590477 - | hypothetical protein TERM 4990 5591721 - 5591735 + g 70 -2.8 -5.0538 | GCGATAGGCTTTGGG CAAAAG GTT CTTCTG TTTTTTCCCGTAAAC Ava_4466 5593248 - 5592298 - | LysR family transcriptional regulator TERM 4991 5593468 - 5593482 + r 76 -5.8 -4.55287 | ATTTCTGACTGTTTG TAGTTT TGA AAACTA TTTTATATAGATAAA Ava_4467 5594463 - 5593681 - | microcompartments protein TERM 4992 5594231 - 5594196 - G 74 -7.7 -3.98826 | gap 1, opp_overlap 5594197 5594209, overlap 5594192 TCACCAAGCTAGAAA CCAGTTGTCCAAACTG TTCAG CAGTTTGCAC-ACCGG ATTCTACAGCCAAAC Ava_4468 5595243 - 5594497 - | hexapaptide repeat-containing transferase TERM 4993 5595038 - 5595023 - G 80 -4.6 -5.2189 | CCAACCATCAAAAAA CCTGCT CCTA AGCTGG CTCCTGCTTCTACTT Ava_4469 5597133 - 5595463 - | ribulose bisphosphate carboxylase, small chain TERM 4994 5597224 - 5597234 + r 70 -8.2 -3.29511 | TGAACAACTGGCGTT CCCC GGA GGGG TTCTCGGAGAGTACC Ava_4470 5597609 - 5597304 - | ethanolamine utilization protein EutN/carboxysome structural protein Ccml Ava_4471 5597960 - 5597616 - | microcompartments protein Ava_4472 5598450 - 5598142 - | microcompartments protein TERM 4995 5598617 - 5598606 - H 74 -3 -5.31275 | opp_overlap 5598606 GTTTATGATAAAAAA GTTT AAAA AAAC TTAATAAAAATTTAT Ava_4473 5599109 - 5600965 + | NAD(P)H-quinone oxidoreductase subunit F TERM 4996 5601001 - 5600984 - f 78 -9.9 -3.41024 | opp_overlap 5600982 5600979 5600978 5600986, overlap 5600982 GTTGTCAATAGAAGA GACGTTG TATG CAACGTC TGTACATTAATTCTT TERM 4997 5602028 - 5602016 - g 71 -9.1 -3.24747 | opp_overlap 5602016 5602014 CGGCTACACCATTAA GCACC TTG GGTGC TGTTATGCAGATGAT TERM 4998 5602061 - 5602071 + G 80 -4.6 -5.1356 | GCCACGGTTTAATTT CGGC ACT GCTG TTTTTGTTGGTGGGG TERM 4999 5602113 - 5602102 - g 77 -3.6 -5.24129 | GTTGTGTATAAAAAA GCAG GTAG CCGC GATTTAGATGTACTC TERM 5000 5602394 - 5602409 + G 78 -10.4 -3.26141 | overlap 5602392 5602391 TACCACGGATTTATT GGAGCG ATCG CGCTCC TGCTTTTATCTTAGC Ava_4474 5601055 - 5602557 + | NAD(P)H-quinone oxidoreductase subunit D4 Ava_4475 5602677 - 5603807 + | CO2 hydration Ava_4476 5607593 - 5603880 - | signal transduction protein Ava_4477 5607750 - 5607995 + | hypothetical protein Ava_4478 5609023 - 5609916 + | nitrogenase reductase TERM 5001 5609942 - 5609980 + T 77 -8.4 -3.85567 | gap 1, opp_overlap 5609949, overlap 5609949 GCAGTTCTGATAGGG T-TTATAACCCCGACTT TTAGAC AAGTCGGGGTTATACCA TTTGACTTTAGAATT TERM 5002 5609949 - 5609972 + T 93 -12.5 -3.39936 | opp_overlap 5609949, overlap 5609942 TGATAGGGTTTATAA CCCCGACTT TTAGAC AAGTCGGGG TTATACCATTTGACT TERM 5003 5609972 - 5609949 - T 93 -12.5 -3.30771 | opp_overlap 5609949 5609942 TGATAGGGTTTATAA CCCCGACTT TTAGAC AAGTCGGGG TTATACCATTTGACT TERM 5004 5610099 - 5610052 - T 76 -10.6 -2.64651 | gap 1, opp_overlap 5610048, overlap 5610048 AATTGTTGAAATCTA GGTAGGGCATTGCCTAACACATC ATG GTTTTGGTGGGCAATGCCC-ACC CTACAGATACTTAGA Ava_4479 5611827 - 5610169 - | glycoside hydrolase family protein TERM 5005 5610230 - 5610212 - G 74 -10.4 -2.62933 | TAAGGCCCGATATCA GTGATGAT ACC ATCATCAC CAGCTTCAACATCAT TERM 5006 5611221 - 5611245 + g 78 -2.1 -5.47218 | overlap 5611222 TAATGATGCGAATAC CTCGTTGATGG CAT TCATCAACCAA TTTTTTTAAATCAGC TERM 5007 5612109 - 5612066 - R 90 -9.1 -4.4009 | TTTTACTGTATAAAA GCAAATATTCGGGTAAATA TAATCT TAATCAACCGAATATTTGC CAAAATGTATTATTT Ava_4480 5612496 - 5612119 - | hypothetical protein TERM 5008 5612336 - 5612356 + g 70 -7.5 -3.83262 | overlap 5612347 TCTGGATACTCATCA CGCCATTCT GAT GGAACGGCG TTGTTGTCCCATTTC Ava_4481 5612603 - 5612908 + | acylphosphatase Ava_4482 5613946 - 5612960 - | alcohol dehydrogenase TERM 5009 5613357 - 5613332 - G 93 -12.7 -3.06831 | CCAATTTGCACCTAA TTGACGGGCAA ATTC TTGCCCATCAA TATCCCCAGGACGAG TERM 5010 5613462 - 5613450 - G 73 -5.5 -4.70879 | CCGAAACCGTAAAAA CCGAG TTT CTCAG CATCTCCAGTCATAT Ava_4483 5614787 - 5614089 - | hypothetical protein TERM 5011 5614912 - 5614897 - H 70 -9 -3.04144 | opp_overlap 5614890 GTGTCATGTCTAATA GTACCC TGGA GGGTAC CATAAGATGTCGTAA TERM 5012 5614976 - 5614999 + H 75 -10.4 -2.57132 | opp_overlap 5614976, overlap 5614975 AATTTTCAGAAAAGA GTCAAAATCG ATGG CGATTTTGGC ATTATGGCAGGGCGA TERM 5013 5614999 - 5614976 - H 74 -8.2 -3.80535 | opp_overlap 5614976 5614975 AATTTTCAGAAAAGA GTCAAAATCG ATGG CGATTTTGGC ATTATGGCAGGGCGA Ava_4484 5615080 - 5617188 + | oligopeptidase A Ava_4485 5617593 - 5617330 - | hypothetical protein Ava_4486 5618461 - 5619381 + | hypothetical protein TERM 5014 5619556 - 5619533 - T 100 -11 -4.8048 | opp_overlap 5619533 TTTCGACATGAAAAA CCCCTCTACC ATCG GGTACAGGGG TTTCTTATTTTATAC TERM 5015 5619533 - 5619556 + T 100 -11 -4.72617 | opp_overlap 5619533 TTTCGACATGAAAAA CCCCTCTACC ATCG GGTACAGGGG TTTCTTATTTTATAC psbM 5619697 - 5619581 - | photosystem II reaction center protein M Ava_4487 5620093 - 5619797 - | ferredoxin TERM 5016 5620235 - 5620211 - R 100 -15.9 -5.71983 | opp_overlap 5620218 GTAATTACAAAAAAA TAGGACAGGTA AAC TACCTGTCCTA GAAATTGACTATAGT Ava_4488 5620393 - 5620256 - | photosystem II reaction center protein K Ava_4489 5626223 - 5620671 - | serine/threonine protein kinase and signal transduction histidine kinase with GAF sensor TERM 5017 5621144 - 5621160 + g 73 -5.9 -4.47271 | TTTGTTTGACGGCTA TAGGTAA AGA TTGCCTA TTTTGCTTAAATTTC TERM 5018 5622010 - 5622041 + g 100 -8.8 -5.18355 | overlap 5622013 5622014 GTTGATATGGGAATT TGATTGATTGAGGC GATC GCCTCAATCACTAA TTTTTCATTTTTGAG TERM 5019 5622013 - 5622038 + g 78 -10.5 -3.39564 | overlap 5622010 5622014 GATATGGGAATTTGA TTGATTGAGGC GATC GCCTCAATCAC TAATTTTTCATTTTT TERM 5020 5622014 - 5622037 + g 95 -14 -2.61298 | overlap 5622013 5622010 ATATGGGAATTTGAT TGATTGAGGC GATC GCCTCAATCA CTAATTTTTCATTTT TERM 5021 5625776 - 5625764 - G 70 -7.7 -3.61398 | TTTCTCTGGGAAGAA GGGAT GCA ATCCC AAAGTCAATTAATCT Ava_4490 5627055 - 5626516 - | hypothetical protein TERM 5022 5627256 - 5627282 + r 71 -9.4 -2.55351 | opp_overlap 5627251, overlap 5627255 GTGCATTAGATGTAG GTTGGGTTAAGC AAA GCGCAACCCAAC ATTGATCTCGAAAAC TERM 5023 5627378 - 5627338 - R 77 -10.4 -2.75844 | gap 2, opp_overlap 5627362, overlap 5627337 TTCCTTACGTCAAAC GCCACTCGCCCCAAGCCGGG AGA CCCGTC-CAAGGCG-GTGGC TTCCCAACCTACAAT Ava_4491 5628210 - 5627500 - | ribose-5-phosphate isomerase A Ava_4492 5630334 - 5628517 - | TPR repeat-containing protein Ava_4493 5630624 - 5630818 + | hypothetical protein TERM 5024 5630937 - 5630910 - T 79 -10.7 -3.24021 | overlap 5630905 5630903 TTTTTAAATACTTAA GGGTGAATTCT TTAAAT AGAATCCACCC ACAAATCGCACTTTT Ava_4494 5631449 - 5631060 - | hypothetical protein TERM 5025 5631728 - 5631738 + H 70 -5.4 -4.45544 | ATTTGAATCTTACTT TCGA CCA TCGA TTTTCATTAGTGGAG TERM 5026 5632159 - 5632125 - g 72 -6.5 -4.27441 | gap 1, opp_overlap 5632125 ATGATTATGAAGAAA TGTTCGGTACATCACC CACT GGTGAAGTACC-AGCA TAATTACCAAGTTGA Ava_4495 5631761 - 5632162 + | hypothetical protein Ava_4496 5632206 - 5633300 + | peptidase C56, PfpI Ava_4497 5633425 - 5634123 + | cyclase/dehydrase Ava_4498 5634209 - 5635378 + | zinc-containing alcohol dehydrogenase superfamily protein Ava_4499 5635668 - 5636075 + | hypothetical protein TERM 5027 5636102 - 5636128 + F 100 -14.6 -2.89881 | overlap 5636090 CTGCGGGTGTTTAGA TCCCCGATTTTT TTA AAAAGTCGGGGA TATATGACCTGAATA Ava_4500 5636180 - 5637358 + | zinc-containing alcohol dehydrogenase superfamily protein Ava_4501 5637361 - 5637699 + | hypothetical protein TERM 5028 5637719 - 5637702 - T 82 -11.3 -3.44051 | opp_overlap 5637693 5637691 5637704 CCGGGATGAGTAGAA GACGCGA TGAA TCGCGTC TCTACAGATGGTTTA Ava_4502 5638303 - 5637974 - | hypothetical protein Ava_4503 5638461 - 5643854 + | Serine/threonine protein kinase and Signal transduction histidine kinase (STHK) with GAF sensor Ava_4504 5644071 - 5649458 + | Serine/threonine protein kinase and Signal transduction histidine kinase (STHK) with GAF sensor Ava_4505 5649758 - 5650612 + | hypothetical protein Ava_4506 5651438 - 5650692 - | DSBA oxidoreductase Ava_4507 5652551 - 5651691 - | rhodanese-like protein Ava_4508 5653771 - 5652695 - | hypothetical protein TERM 5029 5653426 - 5653456 + g 100 -14.2 -3.30474 | opp_overlap 5653429 5653440, overlap 5653429 CATTATGACCCCAAG GAATTTGTGCAACA GCT TGTTGCACAAACTC TTCATCATTATAAGC TERM 5030 5653429 - 5653453 + g 100 -14.5 -2.52529 | opp_overlap 5653429 5653440, overlap 5653426 TATGACCCCAAGGAA TTTGTGCAACA GCT TGTTGCACAAA CTCTTCATCATTATA TERM 5031 5653453 - 5653429 - G 100 -14.5 -3.36289 | opp_overlap 5653426 5653429, overlap 5653440 TATGACCCCAAGGAA TTTGTGCAACA GCT TGTTGCACAAA CTCTTCATCATTATA Ava_4509 5653857 - 5655230 + | small GTP-binding protein domain-containing protein Ava_4510 5655563 - 5655841 + | hypothetical protein TERM 5032 5655955 - 5655921 - T 78 -10.2 -3.39803 | overlap 5655922 CATTTATACCCATAA CGGCTAACTGGTAA AACACAA TTACCAATTAGCCA TTACCAATTTCTTGA TERM 5033 5655954 - 5655922 - T 81 -11.5 -2.6356 | overlap 5655921 ATTTATACCCATAAC GGCTAACTGGTAA AACACAA TTACCAATTAGCC ATTACCAATTTCTTG Ava_4511 5656796 - 5655978 - | hemolysin A Ava_4512 5657675 - 5656890 - | ABC transporter-like TERM 5034 5658189 - 5658234 + r 100 -12 -4.40333 | opp_overlap 5658189 5658219 TAAGATGTATTAAAA GTCTTGGTAAACTCATTCGC CCATAA GCGATAAAGTTTACCAAGAC TTTATATTATTTAGA TERM 5035 5658234 - 5658189 - R 100 -14.9 -4.30809 | opp_overlap 5658189, overlap 5658219 TAAGATGTATTAAAA GTCTTGGTAAACTCATTCGCC CATA AGCGATAAAGTTTACCAAGAC TTTATATTATTTAGA Ava_4513 5659224 - 5658442 - | phosphate ABC transporter permease Ava_4514 5660402 - 5659521 - | phosphate ABC transporter permease Ava_4515 5661453 - 5660425 - | phosphate ABC transporter permease Ava_4516 5662539 - 5661496 - | periplasmic phosphate binding protein era 5663583 - 5664596 + | GTP-binding protein Era Ava_4519 5665592 - 5665356 - | hypothetical protein Ava_4518 5664716 - 5665426 + | two component LuxR family transcriptional regulator Ava_4520 5666108 - 5665686 - | transposase IS200 TERM 5036 5665842 - 5665856 + g 73 -8.6 -3.64822 | opp_overlap 5665842 5665841 5665855 TTGTTGTCTCAAAAT TCTGCT AGA AGCAGA TTTAAGTGAAGCCAT Ava_4521 5666172 - 5668901 + | transposase TERM 5037 5668903 - 5668924 + T 72 -7.9 -3.73224 | opp_overlap 5668903 ATTATAACGCTTAAA TCCCCACTC ACAA GGGCGGGGA TTTGGTAACGGGTAA Ava_4522 5669355 - 5669005 - | Rieske (2Fe-2S) region Ava_4523 5669852 - 5670652 + | hypothetical protein TERM 5038 5670740 - 5670780 + T 87 -11.4 -3.58533 | gap 1, opp_overlap 5670745, overlap 5670742 5670743 5670745 AATTGCATAACTACT AATA-AGGTCTGTTGACTG TCAA CGGTCAACAGACCTATATC TTTACCCCCTTATAC TERM 5039 5670742 - 5670778 + T 100 -14 -3.36837 | gap 1, opp_overlap 5670745, overlap 5670740 5670743 5670745 TTGCATAACTACTAA TA-AGGTCTGTTGACTG TCAA CGGTCAACAGACCTATA TCTTTACCCCCTTAT TERM 5040 5670743 - 5670776 + T 100 -14.7 -3.24976 | opp_overlap 5670745, overlap 5670742 5670740 5670745 TGCATAACTACTAAT AAGGTCTGTTGACTG TCAA CGGTCAACAGACCTA TATCTTTACCCCCTT TERM 5041 5670774 - 5670745 - T 100 -15.1 -3.78793 | opp_overlap 5670745 5670743 5670742 5670740 CATAACTACTAATAA GGTCTGTTGACTG TCAA CGGTCAACAGACC TATATCTTTACCCCC TERM 5042 5670745 - 5670774 + T 100 -17.3 -3.18571 | opp_overlap 5670745, overlap 5670743 5670742 5670740 CATAACTACTAATAA GGTCTGTTGACTG TCAA CGGTCAACAGACC TATATCTTTACCCCC Ava_4524 5672421 - 5670907 - | hypothetical protein Ava_4525 5672742 - 5674145 + | amidase Ava_4526 5674595 - 5674299 - | hypothetical protein Ava_4527 5676001 - 5675141 - | hypothetical protein TERM 5043 5676055 - 5676037 - R 81 -4.5 -5.30155 | CGACGAACTAAAAAA CGGTAGG TAACT CTTACCG TGGCGATCATCTACT Ava_4528 5677064 - 5676279 - | hypothetical protein TERM 5044 5676856 - 5676867 + g 74 -4.4 -4.9448 | CTTTGAAGTTGTCTA GCTT TCTC AAGC TTTTCTTTGATGCGT TERM 5045 5677289 - 5677266 - R 81 -9.6 -3.81146 | gap 1 CTGTCTAAGTAATAA GGGGTG-GACA AAA TGCCCCACCCC AAAAAATGAATCATT Ava_4529 5678037 - 5677378 - | hypothetical protein TERM 5046 5678003 - 5677987 - G 75 -7.3 -4.31837 | overlap 5677974 AACAAATTCAATAAA TCTGCCT TCA AGGCAAA ACTCTGATACATCTT Ava_4530 5678361 - 5678104 - | hypothetical protein TERM 5047 5678275 - 5678261 - G 70 -7.2 -3.7732 | GCTTCACACCAACAA GGAATT TCT AATTCC TGTAAGCGCTGATAT TERM 5048 5678798 - 5678774 - g 70 -5.7 -4.32201 | overlap 5678776 CCAAGGAACCGAAAA TACTGGGAATG TGG CATCCACAGCA ATTCAACAGGTAATT Ava_4531 5678679 - 5679374 + | S-layer region-like TERM 5049 5679725 - 5679751 + F 73 -8.8 -3.30124 | CTTAGTGAACACATT TTAGGCTGCTAC TTA GTAACAGTCTAA TTCTCCGGGCTACCC TERM 5050 5680925 - 5680897 - g 70 -5.4 -4.50661 | gap 1, overlap 5680898 AAGCTACAAGCAAAA CTGCCCA-ATCAA TATA TTGATGTGGGCAT TGCGGAACAACACGC TERM 5051 5680924 - 5680898 - g 71 -8.9 -3.29312 | gap 1, overlap 5680897 AGCTACAAGCAAAAC TGCCCA-ATCAA TATA TTGATGTGGGCA TTGCGGAACAACACG Ava_4532 5679823 - 5681730 + | 1-deoxy-D-xylulose-5-phosphate synthase TERM 5052 5681774 - 5681790 + F 100 -12.3 -5.37345 | ACAAATTGAGCATCA GGTGGGT ATT ACCCACC TTTTTTATGCTTCAA TERM 5053 5681943 - 5681927 - f 73 -9.5 -2.84013 | overlap 5681926 GAACTAGATTTAAAT CTATGGA TGA TCCATAG GAAATAGGAATGATG Ava_4533 5682164 - 5682652 + | hypothetical protein TERM 5054 5682670 - 5682707 + T 100 -10.9 -5.30575 | gap 1, opp_overlap 5682678, overlap 5682674 AAGAAATATCAAGGG TGCAGATATCCGATTTCT TGA AGAAATCGGGTATCT-TA TTTTTTGAGTTTTTA TERM 5055 5682674 - 5682704 + T 100 -16.4 -4.68528 | opp_overlap 5682678, overlap 5682670 AATATCAAGGGTGCA GATATCCGATTTCT TGA AGAAATCGGGTATC TTATTTTTTGAGTTT TERM 5056 5682700 - 5682678 - T 73 -9.2 -2.88579 | opp_overlap 5682674 5682670 TCAAGGGTGCAGATA TCCGATTTCT TGA AGAAATCGGG TATCTTATTTTTTGA Ava_4534 5683842 - 5682763 - | hypothetical protein TERM 5057 5684016 - 5684026 + r 70 -8.2 -3.29511 | opp_overlap 5684023 5684024 GAACGCTACCGCGTT CGCC AAA GGCG TTCTCGCAGAGTACC Ava_4535 5685089 - 5684151 - | LysR family transcriptional regulator Ava_4536 5687219 - 5685345 - | S-layer region-like TERM 5058 5687198 - 5687182 - G 81 -4.4 -5.4111 | opp_overlap 5687187, overlap 5687183 AATAACCATAAAAAA CCTGCT CCACC AGCAGA GGCTAGTAGATATTT Ava_4537 5688753 - 5687551 - | HEAT repeat-containing PBS lyase TERM 5059 5688801 - 5688791 - R 72 -8.2 -3.54741 | TATGAGTGCTGTAAA GCCC TGT GGGC ATAGCTGCGGCGTTT Ava_4538 5689300 - 5688890 - | Rieske (2Fe-2S) region TERM 5060 5689724 - 5689748 + H 84 -9.9 -3.77831 | opp_overlap 5689713 5689725, overlap 5689725 GAAACCCCTCTCCAA ACCTCTCCCCG AAG CGGAGAGAGGC TTTGAATCTTACTCC TERM 5061 5689747 - 5689725 - H 100 -15.6 -3.5394 | opp_overlap 5689724 5689725, overlap 5689713 AAACCCCTCTCCAAA CCTCTCCCCG AAG CGGAGAGAGG CTTTGAATCTTACTC TERM 5062 5689725 - 5689747 + H 90 -13.4 -2.86217 | opp_overlap 5689713 5689725, overlap 5689724 AAACCCCTCTCCAAA CCTCTCCCCG AAG CGGAGAGAGG CTTTGAATCTTACTC TERM 5063 5689763 - 5689804 + H 84 -10.9 -3.61536 | gap 1 CTTTGAATCTTACTC CCCTTCCCTGCGTTCG-CGT AGC GTGTCGAAGACAGGGAAGGG TTTGGGGGTTAGGTT TERM 5064 5690016 - 5689990 - H 93 -12.2 -3.65827 | overlap 5689978 5689991 GAAGGGGGAGCCAAA CTCCCCTCTCCG CGT CGGAGAGGGGTT GGGGGAGAGGTTCTT TERM 5065 5690015 - 5689991 - H 100 -15.7 -2.79175 | overlap 5689978 5689990 AAGGGGGAGCCAAAC TCCCCTCTCCG CGT CGGAGAGGGGT TGGGGGAGAGGTTCT TERM 5066 5690208 - 5690194 - g 100 -10 -4.70879 | TTCAAAGCCGAAAAA GATGGC CTT GCCATC AAGTCAGAGATTGAA nirA 5690128 - 5691738 + | ferredoxin-nitrite reductase Ava_4540 5691895 - 5693217 + | twin-arginine translocation pathway signal Ava_4541 5693253 - 5694092 + | nitrate transport permease Ava_4542 5694274 - 5696247 + | nitrate transport ATP-binding subunits C and D Ava_4543 5696374 - 5697207 + | nitrate transport ATP-binding subunits C and D TERM 5067 5698026 - 5698010 - g 80 -3.7 -5.39721 | opp_overlap 5698010 GTACCACAGAAAAAA CCATC AGGTAAA GATGG TTGTGGTTGATCCTC TERM 5068 5698973 - 5698987 + G 72 -10 -2.74038 | opp_overlap 5698972, overlap 5698971 GTTTGCCCAACTGAC CAAGGG TCG CCCTTG TGATATGTCTGGTAT Ava_4544 5697402 - 5699585 + | assimilatory nitrate reductase (ferredoxin) precursor TERM 5069 5699637 - 5699621 - f 72 -3.7 -4.94147 | AATAATAGAATAAAA CCAATAG TTA CCATTAG TATTTAATATGTAAT TERM 5070 5699759 - 5699780 + F 81 -3.7 -5.48213 | opp_overlap 5699747 AGAGAGAACTTTTAA TCCTCTAGA TTAA TCTACGGGA TTTTTATTTTGACTG Ava_4545 5699828 - 5700286 + | hypothetical protein Ava_4546 5700376 - 5700828 + | hypothetical protein TERM 5071 5701009 - 5700997 - T 70 -5.5 -4.35958 | CGACTAAAGAAATAA TCAGC AAC GCCGA AAAATAAAACCCCGT TERM 5072 5701037 - 5701019 - T 100 -10.3 -5.26119 | opp_overlap 5701016 5701019 CGCCGAAAAATAAAA CCCCGTT TATTC AACGGGG TAATATCTGCGGCAA TERM 5073 5701019 - 5701037 + T 76 -10.3 -2.69151 | opp_overlap 5701019, overlap 5701016 CGCCGAAAAATAAAA CCCCGTT TATTC AACGGGG TAATATCTGCGGCAA TERM 5074 5701220 - 5701250 + T 84 -9.9 -3.71792 | opp_overlap 5701220, overlap 5701216 TTGAGATTGGACAAA GGGGAAAAGAT ACTTACAAC ATCTTTTCCCC TTGCTTTTACCTTAG TERM 5075 5701250 - 5701220 - T 100 -14.2 -3.91144 | opp_overlap 5701216 5701220 TTGAGATTGGACAAA GGGGAAAAGATACT TAC AACATCTTTTCCCC TTGCTTTTACCTTAG Ava_4547 5701836 - 5701285 - | hypothetical protein Ava_4548 5702073 - 5702753 + | HEAT repeat-containing PBS lyase Ava_4549 5702825 - 5703391 + | hypothetical protein TERM 5076 5703587 - 5703552 - g 77 -8.4 -4.04174 | overlap 5703547 5703553 CCTCAGACAAGGAAA GTTTGCAACCTTACAC TCAG GTGCAAGGCTACAAAA AAGGAGAGATTATTC TERM 5077 5703586 - 5703553 - g 86 -11.9 -3.02023 | overlap 5703547 5703552 CTCAGACAAGGAAAG TTTGCAACCTTACAC TCAG GTGCAAGGCTACAAA AAAGGAGAGATTATT Ava_4550 5703482 - 5704198 + | cyclic nucleotide-binding domain-containing protein Ava_4551 5704718 - 5704215 - | hypothetical protein TERM 5078 5704288 - 5704298 + g 79 -6.8 -4.70626 | opp_overlap 5704287 AAAACTAAACACAGC GCTG CAA CAGC TTTTTGCCATTCTTG Ava_4552 5705119 - 5704745 - | cupin region Ava_4553 5705916 - 5705131 - | methyltransferase TERM 5079 5706116 - 5706102 - H 93 -12.8 -3.30124 | CGCCACTTGCTACAA CGCGGG TAA CCCGCG CAACGCAGTGGCTCC Ava_4554 5706227 - 5707870 + | TPR repeat-containing protein TERM 5080 5707966 - 5707933 - T 79 -10.3 -3.22738 | gap 1, opp_overlap 5707928, overlap 5707931 5707938 AACAGAAGCAAGATA TTCAAGCCCCTCTCCG CGT CGGAGAGGGG-TTGGG GTGAGGTCTATCGAA TERM 5081 5707962 - 5707938 - T 100 -15.7 -3.2029 | opp_overlap 5707928, overlap 5707933 5707931 AAGCAAGATATTCAA GCCCCTCTCCG CGT CGGAGAGGGGT TGGGGTGAGGTCTAT Ava_4555 5709345 - 5707993 - | hypothetical protein Ava_4556 5710677 - 5709382 - | FAD linked oxidase-like Ava_4557 5711553 - 5710864 - | thiopurine S-methyltransferase TERM 5082 5711359 - 5711385 + g 81 -11 -3.35996 | overlap 5711362 TTTTTGTCCAGATGG GAATGGTTGATG ATT TGTCAACCATTC TTGTAGATAAGGGTG TERM 5083 5711462 - 5711484 + g 71 -4.3 -4.8543 | gap 1, opp_overlap 5711467, overlap 5711467 TCAGCATATACAACT TCA-AACCAT GCTA ATGGTTCTGA TTTTTGTACGGCTTC TERM 5084 5711635 - 5711593 - R 100 -9.2 -4.96848 | TTTTCCAGATAAAAA GCGATCGCTCTCTATTTACT AGT AACAGATTCAGAGCGATCGC TGTAAAATTTACCTT Ava_4558 5712752 - 5711661 - | calcium/proton exchanger TERM 5085 5712146 - 5712158 + g 72 -7.7 -3.76586 | overlap 5712138 TATTTGGCTTCGGGT GAGGA TTT TCCTC TGTTTCTATTTCCGC TERM 5086 5712539 - 5712555 + g 73 -8.7 -3.5393 | TGATTAATTCTGTGG CGTTACC AAA GGTAGCG TTTAACAAGCCTCCT TERM 5087 5714405 - 5714379 - g 75 -2.2 -5.34555 | GGACACCACAAAAAA GGCACAGAAAAA ACT CTCGCCTATGCC TTTATCAAGGAGTTT TERM 5088 5715144 - 5715111 - g 83 -9 -4.14257 | gap 1 TTCAACAATCACAAA CAGGTAGAGACACTG CATAC CAA-GCCTCTACCTG GCACAAAACAACCCC Ava_4559 5713371 - 5716094 + | glycoside hydrolase family protein TERM 5089 5716149 - 5716119 - T 100 -19.2 -4.15201 | opp_overlap 5716109 5716121 ACTAACCAAAGCAAA GATCCCCAACTTCT TAA AGAAGTCGGGGATC TTAAACTGGGTATCT TERM 5090 5716121 - 5716147 + T 100 -13.8 -3.06671 | opp_overlap 5716119, overlap 5716109 TAACCAAAGCAAAGA TCCCCAACTTCT TAA AGAAGTCGGGGA TCTTAAACTGGGTAT Ava_4560 5716417 - 5716169 - | hypothetical protein Ava_4561 5716702 - 5716457 - | HNH endonuclease Ava_4562 5717085 - 5716699 - | hypothetical protein Ava_4563 5717736 - 5717347 - | hypothetical protein Ava_4564 5718599 - 5717835 - | hypothetical protein TERM 5091 5719319 - 5719309 - g 70 -5.4 -4.50241 | opp_overlap 5719309, overlap 5719299 5719303 AAATATGAACCAAAA CTTG CCT CAAG ATTTAGACAGAGAAA TERM 5092 5719584 - 5719568 - g 70 -3.6 -4.89063 | CCACCGAAAAAGAAA CCAGGT GGGCA ACCAGG ACATCAAGGTAAAAC TERM 5093 5719719 - 5719706 - g 71 -2.3 -5.09245 | overlap 5719708 GTAAAAGTAGAAAAA CACGC GGTA GCGCA ACTAGTAGAATGTCC Ava_4566 5719298 - 5720770 + | transposase IS66 Ava_4567 5721987 - 5720767 - | transposase TERM 5094 5720942 - 5720955 + g 74 -6.7 -4.3129 | opp_overlap 5720942 GTTGCTTGCCAACTA GTTCC GGGG GGAAC TTTTCCTACTAAATC TERM 5095 5722156 - 5722132 - R 72 -9.3 -2.72511 | opp_overlap 5722121 5722134, overlap 5722131 TCCACTGTTCCAAAC TCTTGAGGGGC TTA ACCCCTCAATA ATTCGCCAACAGTAT TERM 5096 5722134 - 5722154 + r 78 -11.2 -2.71011 | opp_overlap 5722132 5722131, overlap 5722121 CACTGTTCCAAACTC TTGAGGGG CTTAA CCCCTCAA TAATTCGCCAACAGT Ava_4568 5723063 - 5722542 - | hypothetical protein Ava_4569 5725615 - 5723150 - | phosphoenolpyruvate synthase TERM 5097 5724828 - 5724840 + g 73 -9.1 -3.55122 | ATAATTGAACGGTAT CCCTG TTT CAGGG TTGGTTTAAATACTA TERM 5098 5726034 - 5726054 + G 78 -4 -5.1356 | overlap 5726036 5726037 TGGTTTTGTCGCCAC TGTTGGCA AGATA TGCCAGTA TTTTTGTTCATCACC Ava_4570 5725911 - 5726207 + | hypothetical protein TERM 5099 5726282 - 5726300 + T 83 -7.4 -4.76644 | opp_overlap 5726282 ATCTATATTTTCAAA CCCTCG ATCCTTA CGAGGG TTTTTCATGAATATT TERM 5100 5726363 - 5726351 - T 74 -4.8 -4.88918 | TTATCGTAAATAAAA GGGT TTAAG ACCC CTACGTCTATACGTA TERM 5101 5726431 - 5726404 - T 78 -9.2 -3.53224 | gap 1, opp_overlap 5726410, overlap 5726423 CAGGCGGGGTTTAAA TTCCCCGAAGTTG CCA CAACG-CGGGGAA CCCGCGCAAGGCACT TERM 5102 5726437 - 5726423 - T 93 -12.8 -3.31322 | opp_overlap 5726410 5726435, overlap 5726404 CCGAAGTTGCCACAA CGCGGG GAA CCCGCG CAAGGCACTTCTCTT Ava_4571 5726811 - 5726590 - | hypothetical protein Ava_4572 5728742 - 5727102 - | ABC transporter, transmembrane region Ava_4573 5729273 - 5728974 - | hypothetical protein Ava_4574 5729611 - 5730330 + | MotA/TolQ/ExbB proton channel Ava_4575 5730587 - 5731240 + | biopolymer transport protein ExbD/TolR TERM 5103 5731496 - 5731480 - f 74 -9.5 -3.09933 | opp_overlap 5731475 TTGCAATTCAGGGAA GTTATGG AAT CCATAAC ACGCCTTAGATGTTT Ava_4576 5731619 - 5731984 + | membrane protein of unknown function TERM 5104 5732037 - 5731992 - T 70 -3.3 -4.98911 | opp_overlap 5731993, overlap 5731993 5731994 GATTATAAAAATAAA TTTGTCAGTTGTCAGTTGT TGGTTTTT ACTACTGACAACTGACCGC TAGCTACTGACAATT TERM 5105 5732035 - 5731994 - T 76 -10.3 -2.73005 | opp_overlap 5731993, overlap 5731993 5731992 TTATAAAAATAAATT TGTCAGTTGTCAGTTGT TGGTTTTT ACTACTGACAACTGACC GCTAGCTACTGACAA Ava_4577 5732763 - 5732062 - | Thf1-like protein TERM 5106 5733357 - 5733300 - g 70 -8 -3.72152 | gap 1, opp_overlap 5733309 5733356, overlap 5733309 GAAGCAAAAGCAGAA GCAACAAAAGAGCAGTTTCTCAAAG TAAATGAAG CTTTGAGGA-CTGCTCTTTTTGTGC GTAATTCTTGCTTGC TERM 5107 5733309 - 5733348 + G 100 -8.8 -4.89339 | gap 1, opp_overlap 5733300 5733309 GCAGAAGCAACAAAA GAGCAGTTTCTCAAAGT AAATGAA GCTTTGAGGA-CTGCTC TTTTTGTGCGTAATT TERM 5108 5733348 - 5733309 - g 78 -5.9 -4.81852 | gap 1, opp_overlap 5733309, overlap 5733300 GCAGAAGCAACAAAA GAGCAGTTTCTCAAAG TAAATGAAG CTTTGAGGA-CTGCTC TTTTTGTGCGTAATT TERM 5109 5733959 - 5733932 - g 95 -7.8 -5.17353 | gap 1 ACAGGCACTAAAAAA GGTACAACGCAGA TTA TCT-CGTTGTGCC AAAGGTTCTACAAAT TERM 5110 5733989 - 5733974 - g 78 -9 -3.88583 | CAAAGGTTCTACAAA TCGTGC CAGA GCACGA AACAGATTAGGGAGA Ava_4578 5733273 - 5734496 + | IS891/IS1136/IS1341 transposase Ava_4579 5734587 - 5735183 + | hypothetical protein Ava_4580 5735737 - 5735369 - | anti-sigma-factor antagonist domain-containing protein Ava_4581 5737195 - 5736152 - | coproporphyrinogen III oxidase TERM 5111 5737261 - 5737231 - H 76 -4.8 -5.03145 | overlap 5737232 CAATTTCCTAAAAAA GCCACAAATCTCTA GTT TAAAAACTTGTGGG TCAAACGAGCCAAAA TERM 5112 5737260 - 5737232 - H 72 -8.3 -3.61164 | overlap 5737231 AATTTCCTAAAAAAG CCACAAATCTCTA GTT TAAAAACTTGTGG GTCAAACGAGCCAAA TERM 5113 5737436 - 5737419 - H 74 -9.9 -2.64144 | opp_overlap 5737418 5737425, overlap 5737418 5737416 5737432 TCTTGATGGAAACAT TCTGGTG TTAA CACCAGA CTCTGGTGAACTAGT Ava_4582 5737703 - 5738227 + | hypothetical protein TERM 5114 5738544 - 5738528 - f 72 -9.5 -2.68493 | opp_overlap 5738524 5738528, overlap 5738527 5738525 TCCATGAGGAAATAC TCAGCAA CTT TTGCTGA TTGATTTTGCAGCTG TERM 5115 5738528 - 5738544 + F 81 -9.5 -3.67622 | opp_overlap 5738528 5738527 5738525, overlap 5738524 TCCATGAGGAAATAC TCAGCAA CTT TTGCTGA TTGATTTTGCAGCTG TERM 5116 5738849 - 5738835 - g 77 -6.4 -4.59511 | AAGAGCCGTGAAAAA GCTACC TGG GGTAAC AGATGTCAGTGTAGA Ava_4583 5738629 - 5739699 + | hypothetical protein Ava_4584 5739913 - 5741229 + | cell cycle protein Ava_4585 5741326 - 5741523 + | hypothetical protein TERM 5117 5741587 - 5741529 - f 88 -12.6 -3.11158 | overlap 5741531 5741564 AGGAAAATAATTAGA TAGTTAGTAGTCAGTTGTCAGTAGCTAG TAG CAAACAACTGACAATTGACAACTAACAA CTGACAAATAATAAT TERM 5118 5741585 - 5741531 - f 100 -15.2 -3.09965 | overlap 5741529 5741564 GAAAATAATTAGATA GTTAGTAGTCAGTTGTCAGTAGCTAG TAG CAAACAACTGACAATTGACAACTAAC AACTGACAAATAATA Ava_4586 5741604 - 5742260 + | hypothetical protein TERM 5119 5743922 - 5743894 - g 78 -10.3 -3.31144 | opp_overlap 5743894 GCCTTAGGTGTAGAA GCATCGCCATTAC TCC GCATTGACGATGC TTCTGCACCGGGAAT Ava_4587 5742406 - 5744544 + | Sodium/hydrogen exchanger Ava_4588 5744889 - 5745824 + | 3-beta hydroxysteroid dehydrogenase/isomerase TERM 5120 5746040 - 5746059 + G 84 -10.8 -3.6682 | AGGAGCTTGCTTGGC TCACATCG GACA CGATGTGA TTTGCATAGATAACA TERM 5121 5746429 - 5746414 - g 71 -2.4 -5.11033 | opp_overlap 5746420 5746423 CAGAACGGCAAAAAA CCCTCG TAAC CGCAGG TGGCGGTAGTGTTGA TERM 5122 5746705 - 5746719 + G 70 -7.2 -3.82261 | ATGCGGCAAACGCTT TCTTAG CCA CTAAGA TTAGTTTTATTAACG Ava_4589 5745981 - 5747369 + | UDP-glucose/GDP-mannose dehydrogenase TERM 5123 5747410 - 5747444 + T 86 -6.5 -5.15969 | opp_overlap 5747417, overlap 5747415 TGTAATTAAATAACT CTCAATACCGCTTAG TATTT CTAGGCGGTATTTAA TTTTTTGACTTACAG TERM 5124 5747415 - 5747439 + T 95 -10.8 -4.43669 | opp_overlap 5747417, overlap 5747410 TTAAATAACTCTCAA TACCGCTTAG TATTT CTAGGCGGTA TTTAATTTTTTGACT Ava_4590 5747944 - 5747474 - | hypothetical protein Ava_4591 5748095 - 5747949 - | hypothetical protein Ava_4592 5748217 - 5748504 + | hypothetical protein Ava_4593 5748537 - 5748866 + | hypothetical protein TERM 5125 5749138 - 5749153 + G 76 -2.6 -5.26316 | gap 1, opp_overlap 5749127, overlap 5749135 5749141 ACGATCATCAGCCTT GATGACT TCA AGTC-TC TTTTTTATCAACTCA Ava_4594 5749069 - 5750082 + | hypothetical protein Ava_4595 5751841 - 5750246 - | nickel-dependent hydrogenase, large subunit TERM 5126 5751454 - 5751478 + g 91 -3.5 -5.80003 | overlap 5751456 5751457 AGCGGCGGACGGCTT CATCGTAGAAG CGG CTACTACGGTA TTTTTTGTTTGTTAA TERM 5127 5751456 - 5751476 + g 74 -6.1 -4.51345 | overlap 5751454 5751457 CGGCGGACGGCTTCA TCGTAGAAG CGG CTACTACGG TATTTTTTGTTTGTT Ava_4596 5752879 - 5751917 - | NADH ubiquinone oxidoreductase, 20 kDa subunit TERM 5128 5752858 - 5752829 - G 72 -7.1 -3.97413 | overlap 5752827 5752832 GGCATTAAGAAAAGA CATGGTGTTGCCT GAAC AAGCACCACCTTG CAGCCAGAGTACGTT Ava_4597 5753349 - 5753615 + | hypothetical protein Ava_4598 5753624 - 5753848 + | hypothetical protein TERM 5129 5753941 - 5753968 + F 100 -10 -5.03994 | opp_overlap 5753940 TTGCCTAGAGATTAG GGGCTGAAAAAT ATTG ATTTTTCATCCC TTTTTGTCTGTAAAC TERM 5130 5754106 - 5754093 - g 73 -5.9 -4.43681 | overlap 5754095 GATTCAACAGTAAAA GCCGC ATTG GCAGC CATTGCATCGGAATC Ava_4599 5754060 - 5755037 + | hypothetical protein TERM 5131 5755039 - 5755056 + F 84 -11.3 -3.62046 | opp_overlap 5755041 TAAGCCACTTGTAGA GACGCGA TTCA TCGCGTC TTCTTCAGCCAATGA Ava_4600 5755094 - 5755570 + | nitrogen-fixing NifU-like Ava_4601 5755596 - 5756768 + | NHL repeat-containing protein Ava_4602 5756792 - 5759152 + | hydrogenase maturation protein HypF Ava_4603 5759242 - 5759502 + | hydrogenase expression/formation protein (HUPF/HYPC) Ava_4604 5759737 - 5760888 + | hydrogenase formation HypD protein Ava_4605 5760942 - 5761157 + | 4-oxalocrotonate tautomerase TERM 5132 5761195 - 5761174 - f 76 -4.4 -5.14163 | ATTTACCAATAAAAA CTCCACCC GCAAAG GAATGGAG TTTTGTCAGTGGTCA TERM 5133 5761264 - 5761298 + F 100 -13.6 -3.55563 | opp_overlap 5761263 5761266, overlap 5761266 5761268 5761269 TTGAAAATATCTAAG TATCTGTGGGGTGGGC AAT GCCCACCCTACGTATG TTTCAAAAATCAAAT TERM 5134 5761296 - 5761266 - f 73 -9.6 -2.81509 | opp_overlap 5761264 5761266 5761268 5761269, overlap 5761263 GAAAATATCTAAGTA TCTGTGGGGTGGGC AAT GCCCACCCTACGTA TGTTTCAAAAATCAA TERM 5135 5761266 - 5761296 + F 100 -14 -3.35597 | opp_overlap 5761266 5761263, overlap 5761264 5761268 5761269 GAAAATATCTAAGTA TCTGTGGGGTGGGC AAT GCCCACCCTACGTA TGTTTCAAAAATCAA TERM 5136 5761268 - 5761294 + F 100 -16.6 -3.24708 | opp_overlap 5761266 5761263, overlap 5761266 5761264 5761269 AAATATCTAAGTATC TGTGGGGTGGGC AAT GCCCACCCTACG TATGTTTCAAAAATC TERM 5137 5761269 - 5761293 + F 100 -17.9 -2.54504 | opp_overlap 5761266 5761263, overlap 5761268 5761266 5761264 AATATCTAAGTATCT GTGGGGTGGGC AAT GCCCACCCTAC GTATGTTTCAAAAAT TERM 5138 5762321 - 5762332 + G 70 -5.8 -4.35044 | AATTTGTGAAATTTT GGGT TTAG ACCC TTTATATTTAGCTAA Ava_4606 5761449 - 5762552 + | hydrogenase expression/formation protein HypE Ava_4607 5762571 - 5762912 + | hydrogenase expression/synthesis, HypA Ava_4608 5762903 - 5763748 + | hydrogenase accessory protein HypB Ava_4609 5764048 - 5763788 - | hypothetical protein TERM 5139 5764039 - 5764027 - G 82 -7.7 -4.4959 | TGCAATTAACTAAAA TCCCT ATC AGGGA TTGAAACATACCTAG TERM 5140 5764109 - 5764097 - H 82 -7.7 -4.4959 | TGCAATTAACTAAAA TCCCT ATC AGGGA TTGAAACAATTCATT TERM 5141 5764183 - 5764171 - H 82 -7.7 -4.4959 | TGCAATTAACTAAAA TCCCT ATC AGGGA TTGAAACGATGAGCT TERM 5142 5764264 - 5764252 - H 82 -7.7 -4.4959 | TGCAATTAACTAAAA TCCCT ATC AGGGA TTGAAACAGCAATTC TERM 5143 5764335 - 5764323 - H 82 -7.7 -4.4959 | TGCAATTAACTAAAA TCCCT ATC AGGGA TTGAAACGTCAATTG TERM 5144 5764407 - 5764395 - H 82 -7.7 -4.4959 | TGCAATTAACTAAAA TCCCT ATC AGGGA TTGAAACATCGCAAG TERM 5145 5764479 - 5764467 - H 82 -7.7 -4.4959 | TGCAATTAACTAAAA TCCCT ATC AGGGA TTGAAACGTAAAAAT TERM 5146 5764523 - 5764494 - H 74 -5.1 -4.81851 | opp_overlap 5764487, overlap 5764487 5764486 5764519 ATTGAAACGTAAAAA TCATGATTTTTAC TATT GAAAAAATCCTGA TTGCAATTAACTAAA TERM 5147 5764552 - 5764540 - H 82 -7.7 -4.4959 | overlap 5764519 TGCAATTAACTAAAA TCCCT ATC AGGGA TTGAAACCAATTTAA TERM 5148 5764628 - 5764616 - H 82 -7.7 -4.4959 | TGCAATTAACTAAAA TCCCT ATC AGGGA TTGAAACAAAGAAGT TERM 5149 5764700 - 5764688 - H 82 -7.7 -4.4959 | TGCAATTAACTAAAA TCCCT ATC AGGGA TTGAAACACTATGTA TERM 5150 5764778 - 5764766 - H 82 -7.7 -4.4959 | TGCAATTAACTAAAA TCCCT ATC AGGGA TTGAAACACTATTCT TERM 5151 5764849 - 5764837 - H 82 -7.7 -4.4959 | TGCAATTAACTAAAA TCCCT ATC AGGGA TTGAAACCAACTTAC TERM 5152 5764921 - 5764909 - H 82 -7.7 -4.4959 | TGCAATTAACTAAAA TCCCT ATC AGGGA TTGAAACGAGTTGGT TERM 5153 5764991 - 5764979 - H 82 -7.7 -4.4959 | TGCAATTAACTAAAA TCCCT ATC AGGGA TTGAAACGCACCTGA TERM 5154 5765061 - 5765049 - H 82 -7.7 -4.4959 | TGCAATTAACTAAAA TCCCT ATC AGGGA TTGAAACAAAGTTGG TERM 5155 5765130 - 5765118 - H 82 -7.7 -4.4959 | TGCAATTAACTAAAA TCCCT ATC AGGGA TTGAAACGGGAACGC TERM 5156 5765201 - 5765189 - H 82 -7.7 -4.4959 | TGCAATTAACTAAAA TCCCT ATC AGGGA TTGAAACTAAATCGG TERM 5157 5765271 - 5765259 - H 82 -7.7 -4.4959 | TGCAATTAACTAAAA TCCCT ATC AGGGA TTGAAACAGTGGTAT TERM 5158 5765342 - 5765330 - H 82 -7.7 -4.4959 | TGCAATTAACTAAAA TCCCT ATC AGGGA TTGAAACCGAGTTAC TERM 5159 5765412 - 5765400 - H 82 -7.7 -4.4959 | TGCAATTAACTAAAA TCCCT ATC AGGGA TTGAAACGGAATCAG TERM 5160 5765482 - 5765470 - H 82 -7.7 -4.4959 | TGCAATTAACTAAAA TCCCT ATC AGGGA TTGAAACAGCGAATT TERM 5161 5765554 - 5765542 - H 82 -7.7 -4.4959 | opp_overlap 5765551 TGCAATTAACTAAAA TCCCT ATC AGGGA TTGAAACTAAATTCC TERM 5162 5765626 - 5765614 - H 82 -7.7 -4.4959 | TGCAATTAACTAAAA TCCCT ATC AGGGA TTGAAACTATGGAAT TERM 5163 5765696 - 5765684 - H 82 -7.7 -4.4959 | TGCAATTAACTAAAA TCCCT ATC AGGGA TTGAAACAGAAGACG TERM 5164 5765769 - 5765757 - H 82 -7.7 -4.4959 | TGCAATTAACTAAAA TCCCT ATC AGGGA TTGAAACCTGGATAT TERM 5165 5765840 - 5765828 - H 82 -7.7 -4.4959 | TGCAATTAACTAAAA TCCCT ATC AGGGA TTGAAACAGCTGCGC TERM 5166 5765910 - 5765898 - H 82 -7.7 -4.4959 | TGCAATTAACTAAAA TCCCT ATC AGGGA TTGAAACCTAGCGAT TERM 5167 5765981 - 5765969 - H 82 -7.7 -4.4959 | TGCAATTAACTAAAA TCCCT ATC AGGGA TTGAAACCCTATACA TERM 5168 5766054 - 5766042 - H 82 -7.7 -4.4959 | overlap 5766022 TGCAATTAACTAAAA TCCCT ATC AGGGA TTGAAACAAAAAATC TERM 5169 5766133 - 5766121 - H 82 -7.7 -4.4959 | TGCAATTAACTAAAA TCCCT ATC AGGGA TTGAAACAAGTAAGC TERM 5170 5766204 - 5766192 - H 82 -7.7 -4.4959 | TGCAATTAACTAAAA TCCCT ATC AGGGA TTGAAACCAACCCAG TERM 5171 5766276 - 5766264 - H 82 -7.7 -4.4959 | TGCAATTAACTAAAA TCCCT ATC AGGGA TTGAAACTCCTTAAT TERM 5172 5766350 - 5766338 - H 82 -7.7 -4.4959 | TGCAATTAACTAAAA TCCCT ATC AGGGA TTGAAACGCAACATT TERM 5173 5766421 - 5766409 - H 82 -7.7 -4.4959 | TGCAATTAACTAAAA TCCCT ATC AGGGA TTGAAACGTAGGAAA TERM 5174 5766804 - 5766773 - g 100 -8.8 -4.8543 | gap 1 CAATTGGCACAAAAA GCATCTGACTTGGCC GTG AGCCGAGT-AGATGC AGCACCGCCATTAGG Ava_4610 5766563 - 5767849 + | peptidase S1 and S6, chymotrypsin/Hap Ava_4611 5768342 - 5767971 - | hypothetical protein Ava_4612 5769389 - 5768415 - | acetamidase/formamidase Ava_4613 5770590 - 5769520 - | hypothetical protein Ava_4614 5772658 - 5770736 - | hypothetical protein TERM 5175 5771359 - 5771384 + g 85 -4.1 -5.42862 | gap 1 GCTTCATGGAGGTTT CCAAATCAGCTA AAG TA-CGGATTTGG TTTTTTTGCCAATCT Ava_4615 5773570 - 5772671 - | hypothetical protein TERM 5176 5773690 - 5773670 - R 83 -9 -4.26881 | overlap 5773665 CTTGACAAAAGTAAA GGATGAGC GCCTA GCCCATCC CTAAGATAAAAACAA Ava_4616 5776013 - 5773719 - | glycogen branching enzyme Ava_4617 5776714 - 5776376 - | hypothetical protein Ava_4618 5777535 - 5777347 - | hypothetical protein Ava_4619 5778117 - 5778692 + | hypothetical protein Ava_4620 5778863 - 5780692 + | penicillin-binding protein, transpeptidase Ava_4621 5780840 - 5781946 + | hypothetical protein TERM 5177 5782102 - 5782126 + G 71 -4.3 -4.77165 | overlap 5782103 GTCCTGAAGAGTCTA ATTTCTACTCA AAC TGCGTAGAAAA TTTTATTCTCAGGAA Ava_4622 5782068 - 5782760 + | hypothetical protein Ava_4623 5783993 - 5782890 - | hypothetical protein Ava_4624 5784162 - 5785082 + | hypothetical protein TERM 5178 5785084 - 5785101 + T 80 -11.3 -3.27476 | opp_overlap 5785086, overlap 5785098 ATAACGTTTTGTAGA GACGCGA CGAA TCGCGTC TTGATAATTAGACGT Ava_4625 5786200 - 5785109 - | translation-associated GTPase Ava_4626 5786431 - 5786222 - | hypothetical protein TERM 5179 5786666 - 5786680 + G 87 -8.6 -4.51743 | CATTTTGTGGATAGT GTTCCT TTT AGGAAC TTTATTTCATACTCA Ava_4627 5786622 - 5787071 + | hypothetical protein TERM 5180 5787088 - 5787115 + T 81 -7 -4.66625 | TTTATCAAAGTTTAT TGGTCAGTTGTC GGTT GCCAACTAACCA TTTCTTTGTATGTGT Ava_4628 5788710 - 5787136 - | hypothetical protein TERM 5181 5787205 - 5787225 + g 75 -3.3 -5.24003 | AGATTTTTCTTGATA TTTTGCCAA TTC TTGGGGAAA TTTTTCATTTTTCTT nagB 5789830 - 5789054 - | glucosamine-6-phosphate deaminase TERM 5182 5789674 - 5789697 + g 71 -4.6 -4.57921 | TTAGTTGAGAATTTC CTGTTGCT AGCAACAC AGCAGCAG TCTTTTTTTCTTCTA Ava_4630 5789966 - 5790643 + | HAD family hydrolase TERM 5183 5790713 - 5790751 + T 73 -9.7 -2.50982 | gap 1, overlap 5790712 5790711 5790715 5790721 CAATCCTTTCCTAGC TAGCC-TAACGCACATCT ATGA AGCGGTGCGTTATGGCTA AATTTAATTTTTAAT TERM 5184 5790755 - 5790765 + T 70 -2.6 -5.1971 | opp_overlap 5790755, overlap 5790762 GCGTTATGGCTAAAT TTAA TTT TTAA TTTTTAATTTTTAAT Ava_4631 5795865 - 5790847 - | multi-sensor hybrid histidine kinase TERM 5185 5795969 - 5795949 - H 77 -9.8 -3.28188 | ATGAAAAGTCAGCAA TTTGGCGA AAATA TCGCCAAA AAAACTCAATTAGTA Ava_4632 5796187 - 5796999 + | radical SAM family protein Ava_4633 5797098 - 5797721 + | anaerobic ribonucleoside-triphosphate reductase activating protein ureE 5797875 - 5798318 + | urease accessory protein UreE Ava_4635 5798296 - 5798985 + | urease accessory protein UreF TERM 5186 5798981 - 5799021 + F 76 -9.9 -3.06261 | opp_overlap 5799000 5799002 5799007 5799009, overlap 5798986 5798988 5798993 5798996 5798999 CAAGGTTGTTTAGGA GTTGACAGTTGACAGTTAA CAG TTAACAGTTAACAGTTAAC TGTTAACAGTTAACA TERM 5187 5798988 - 5799042 + F 100 -19 -3.42124 | opp_overlap 5799000 5799002 5799007 5799009, overlap 5798986 5798981 5798993 5798996 5798999 GTTTAGGAGTTGACA GTTGACAGTTAACAGTTAACAGTTAA CAG TTAACTGTTAACAGTTAACAGTTGAC TTATGAATGCTTTTC TERM 5188 5799037 - 5799000 - f 90 -12.9 -3.13177 | opp_overlap 5798986 5798981 5798988 5798996 5798993 5798999, overlap 5799002 5799007 5799009 ACAGTTGACAGTTAA CAGTTAACAGTTAACAG TTAA CTGTTAACAGTTAACAG TTGACTTATGAATGC TERM 5189 5799035 - 5799002 - f 100 -14.1 -3.12505 | opp_overlap 5798986 5798981 5798988 5798996 5798993 5798999, overlap 5799000 5799007 5799009 AGTTGACAGTTAACA GTTAACAGTTAACAG TTAA CTGTTAACAGTTAAC AGTTGACTTATGAAT TERM 5190 5799042 - 5799009 - f 77 -9.7 -3.1577 | opp_overlap 5798986 5798981 5798988 5798996 5798993 5798999, overlap 5799002 5799000 5799007 AGTTAACAGTTAACA GTTAACAGTTAACTG TTAA CAGTTAACAGTTGAC TTATGAATGCTTTTC Ava_4636 5799045 - 5799647 + | urease accessory protein UreG TERM 5191 5799704 - 5799740 + T 84 -7.5 -4.67607 | gap 1, opp_overlap 5799716, overlap 5799705 5799708 GATGTGCTTTATTCT GGACTGTAGAGACGTT CCATGC AACGTCTCTACA-TCA TTTATTTGTTACAAC TERM 5192 5799705 - 5799739 + T 82 -11 -3.39841 | gap 1, opp_overlap 5799716, overlap 5799704 5799708 ATGTGCTTTATTCTG GACTGTAGAGACGTT CCATGC AACGTCTCTACA-TC ATTTATTTGTTACAA TERM 5193 5799708 - 5799737 + T 100 -13.8 -3.25779 | opp_overlap 5799716, overlap 5799705 5799704 TGCTTTATTCTGGAC TGTAGAGACGTT CCATGC AACGTCTCTACA TCATTTATTTGTTAC Ava_4637 5801179 - 5799809 - | thioredoxin reductase TERM 5194 5799963 - 5799975 + g 76 -7.7 -4.14511 | TGGTCAATGTCGATT TCCAC AAA GTGGA TTTTGCCGTCAAATT TERM 5195 5800179 - 5800193 + g 70 -7.2 -3.90559 | TTCTGCGCTACTGGC TGAGTT TCT AACTCA TTATTGATTGTTGGT Ava_4638 5801380 - 5802306 + | binding-protein dependent transport system inner membrane protein TERM 5196 5802675 - 5802689 + F 70 -8.6 -3.09635 | overlap 5802677 AGGTTTACTATTGGT CATCAC CAG GTGATG TTCAATAGTAGCAGT Ava_4639 5802963 - 5803511 + | phosphotransferase KptA/Tpt1 Ava_4640 5803521 - 5804102 + | hypothetical protein Ava_4641 5804139 - 5805677 + | SPFH domain-containing protein/band 7 family protein Ava_4642 5805884 - 5806192 + | RNA-binding region RNP-1 TERM 5197 5806479 - 5806456 - g 80 -4.6 -5.08824 | gap 1, overlap 5806470 5806471 CGCCTATTGAAAAAA GCAAGCGCAAA AAA CTCGC-CTTGC ACAAACAAAGCAAAA TERM 5198 5806493 - 5806470 - g 71 -2.4 -5.10029 | overlap 5806456 5806471 AGCAAGCGCAAAAAA CTCGCCTTGC ACAA ACAAAGCAAA AGACGTTTCCGTACC Ava_4643 5806323 - 5806511 + | 30S ribosomal protein S21 TERM 5199 5806524 - 5806570 + F 100 -17.6 -2.78679 | opp_overlap 5806527 5806532 5806537, overlap 5806532 5806537 TAAAGGATGACATAG AGACAAAAGAAAACCCTCATAG TGC TTATGAGGGTTTTCTTTTGGCG ATTTAGCTCAGAAGA TERM 5200 5806567 - 5806527 - f 100 -21.6 -3.07088 | opp_overlap 5806524 5806532 5806537, overlap 5806532 5806537 AGGATGACATAGAGA CAAAAGAAAACCCTCATA GTGCT TATGAGGGTTTTCTTTTG GCGATTTAGCTCAGA TERM 5201 5806532 - 5806562 + F 100 -16.4 -4.17089 | opp_overlap 5806527 5806532 5806537, overlap 5806524 5806537 GACATAGAGACAAAA GAAAACCCTCATAG TGC TTATGAGGGTTTTC TTTTGGCGATTTAGC TERM 5202 5806562 - 5806532 - f 100 -15.7 -4.6645 | opp_overlap 5806532 5806524 5806537, overlap 5806527 5806537 GACATAGAGACAAAA GAAAACCCTCATA GTGCT TATGAGGGTTTTC TTTTGGCGATTTAGC TERM 5203 5806557 - 5806537 - f 100 -9.8 -5.24647 | opp_overlap 5806532 5806524 5806537, overlap 5806532 5806527 AGAGACAAAAGAAAA CCCTCATA GTGCT TATGAGGG TTTTCTTTTGGCGAT TERM 5204 5806537 - 5806557 + F 100 -10.5 -5.08255 | opp_overlap 5806537 5806532 5806527, overlap 5806532 5806524 AGAGACAAAAGAAAA CCCTCATAG TGC TTATGAGGG TTTTCTTTTGGCGAT Ava_4644 5806871 - 5807293 + | hypothetical protein Ava_4645 5809287 - 5807647 - | adenylate/guanylate cyclase TERM 5205 5811075 - 5811098 + G 70 -5.4 -4.45544 | ATAGTGGAATTCTGA TACCTTCT TTGATGTT AGAAGGTA TTTTAGTTAGTGAAA Ava_4646 5809736 - 5811220 + | hypothetical protein rbgA 5812164 - 5811283 - | ribosomal biogenesis GTPase Ava_4648 5812642 - 5812259 - | glyoxalase/bleomycin resistance protein/dioxygenase Ava_4649 5813817 - 5812759 - | 3-deoxy-7-phosphoheptulonate synthase TERM 5206 5812863 - 5812878 + g 75 -3.2 -5.09426 | GTGTGAGGGATTGCG GCCC GTCGGATA GGGC TTTTTTGGGATTGGG TERM 5207 5813921 - 5813947 + r 100 -21 -3.5525 | opp_overlap 5813912, overlap 5813946 ACCTAACCCCCCTAG CCCCCATTCCCT ACA AGGGAATGGGGG TTTCAAAGCCTCTCT TERM 5208 5813979 - 5813955 - R 80 -9.9 -3.53343 | opp_overlap 5813946 5813956 5813956, overlap 5813912 5813956 AATGGGGGTTTCAAA GCCTCTCTCCG CTT CGGGGAGAGGT TTGGAGAGGGGTCTT TERM 5209 5813978 - 5813956 - R 88 -13.4 -2.71791 | opp_overlap 5813946 5813956 5813956, overlap 5813955 ATGGGGGTTTCAAAG CCTCTCTCCG CTT CGGGGAGAGG TTTGGAGAGGGGTCT TERM 5210 5813956 - 5813978 + r 100 -15.6 -3.53563 | opp_overlap 5813956 5813955, overlap 5813946 5813956 ATGGGGGTTTCAAAG CCTCTCTCCG CTT CGGGGAGAGG TTTGGAGAGGGGTCT Ava_4650 5814718 - 5814248 - | hypothetical protein rpsO 5815000 - 5814731 - | 30S ribosomal protein S15 Ava_4652 5815298 - 5815840 + | hypothetical protein TERM 5211 5816035 - 5816004 - g 72 -8.1 -3.86897 | gap 1 CCCAGTGGTGATAAA CGCTTGA-AGATGC TGGAT GCAGCTATCAAGCG TCACCAGTATCAGCA Ava_4653 5815959 - 5816453 + | bidirectional hydrogenase complex protein HoxE Ava_4654 5816664 - 5818271 + | respiratory-chain NADH dehydrogenase domain-containing protein Ava_4655 5818633 - 5818352 - | hypothetical protein Ava_4656 5818911 - 5818642 - | prevent-host-death protein TERM 5212 5819029 - 5819010 - H 74 -4.2 -5.04249 | TTGCGAAAAAATAAA CGCGAACT GACT AGTCAGCG CTTCACAATCGCACA Ava_4657 5819229 - 5819945 + | bidirectional hydrogenase complex protein HoxU Ava_4658 5820060 - 5820656 + | hypothetical protein Ava_4659 5820729 - 5821274 + | NADH ubiquinone oxidoreductase, 20 kDa subunit Ava_4660 5821356 - 5821955 + | CBS domain-containing protein Ava_4661 5822034 - 5823497 + | nickel-dependent hydrogenase, large subunit Ava_4662 5824130 - 5823573 - | endoribonuclease L-PSP Ava_4663 5825127 - 5824252 - | hypothetical protein Ava_4664 5827996 - 5825240 - | GCN5-related N-acetyltransferase TERM 5213 5825710 - 5825720 + g 73 -8.2 -3.5891 | overlap 5825708 TTGGACGGATGGTTA CGGG AGT CCCG TCTTTCATTGTCCAC TERM 5214 5827182 - 5827201 + g 76 -9.2 -3.51924 | GCACCAGTATGAGAG GCGGCTGC TTTG GCGGCTGC TTCTGTACGTCCGGC Ava_4665 5828895 - 5828419 - | hypothetical protein TERM 5215 5828741 - 5828721 - G 74 -4.8 -4.89339 | gap 1 AAGCATCGATAAAAA TAGCC-ATG TTAA CATTGGCTA ATGAATCCGCTAAAT Ava_4666 5830092 - 5829058 - | 4-hydroxyphenylpyruvate dioxygenase Ava_4667 5830912 - 5830208 - | Short-chain dehydrogenase/reductase SDR Ava_4668 5832158 - 5831541 - | UbiE/COQ5 methyltransferase TERM 5216 5832240 - 5832269 + H 85 -12.3 -3.10244 | opp_overlap 5832248, overlap 5832237 CACTTTATTCTGTAC TGTAGAGACATTG TATG CAACGTCTCTACA TCATTTATTAGGCGC Ava_4669 5832680 - 5832967 + | Mo-dependent nitrogenase-like Ava_4670 5833193 - 5833651 + | response regulator receiver domain-containing protein Ava_4671 5835744 - 5833831 - | Terpene synthase Ava_4672 5835906 - 5837105 + | glycosyl transferase family protein Ava_4673 5838560 - 5837232 - | proteinase inhibitor I4, serpin Ava_4674 5840560 - 5838971 - | hypothetical protein Ava_4675 5840748 - 5841455 + | ribulose-phosphate 3-epimerase TERM 5217 5841483 - 5841504 + T 100 -15.9 -5.9873 | opp_overlap 5841483 TCGTTAACAAAAAAA GGCGATCGC TTGT GCGATCGCC TTTTTTTTATGATGG TERM 5218 5841504 - 5841483 - T 100 -15.9 -5.7946 | opp_overlap 5841483 TCGTTAACAAAAAAA GGCGATCGC TTGT GCGATCGCC TTTTTTTTATGATGG Ava_4676 5842059 - 5841538 - | hypothetical protein Ava_4677 5842534 - 5842094 - | hypothetical protein TERM 5219 5842666 - 5842637 - R 95 -10.9 -4.58685 | AAACTTTTTGAAAAA TGTAGAGATATGA CGAA TCAAATCTCTACA ACAGCCTTATAGATT Ava_4678 5842939 - 5842757 - | CsbD-like TERM 5220 5843103 - 5843139 + r 83 -9.5 -3.91144 | opp_overlap 5843106, overlap 5843106 5843108 AACGAAAGCAAAACA AAAGATCCCCGACTTTT TAG AAAAATCGGGGATCTAA TTTATCACCTATAAA TERM 5221 5843136 - 5843106 - R 100 -17.8 -5.22258 | opp_overlap 5843106 5843103 5843108 GAAAGCAAAACAAAA GATCCCCGACTTTT TAG AAAAATCGGGGATC TAATTTATCACCTAT TERM 5222 5843106 - 5843136 + r 100 -15.6 -3.02186 | opp_overlap 5843106, overlap 5843103 5843108 GAAAGCAAAACAAAA GATCCCCGACTTTT TAG AAAAATCGGGGATC TAATTTATCACCTAT TERM 5223 5843108 - 5843134 + r 85 -12.4 -3.06265 | opp_overlap 5843106, overlap 5843106 5843103 AAGCAAAACAAAAGA TCCCCGACTTTT TAG AAAAATCGGGGA TCTAATTTATCACCT Ava_4679 5843658 - 5843176 - | hypothetical protein Ava_4680 5843981 - 5845978 + | excinuclease ABC subunit B Ava_4681 5846083 - 5846568 + | Serine/threonine protein kinase Ava_4682 5846562 - 5847893 + | WD-40 repeat-containing protein Ava_4683 5848014 - 5848169 + | hypothetical protein TERM 5224 5848242 - 5848260 + F 74 -10.2 -2.72344 | ACCGTATCATGGTTG TGGTGGGC AAT GCCCACCC TACTTGGGAATGCGC Ava_4684 5848264 - 5848578 + | hypothetical protein TERM 5225 5848644 - 5848627 - T 86 -5.5 -5.3658 | ACTATAAAAACAAAA TTTGCCC GTGT GGGCTAA AAAAATTTGTAGGGA TERM 5226 5848694 - 5848672 - T 76 -9.2 -3.42083 | opp_overlap 5848673, overlap 5848670 5848673 GGAATATATATAAGA GGGACACAAA AAT TTTGTGTCCT TATCTCAATCATTGG TERM 5227 5848693 - 5848673 - T 85 -12.7 -2.64527 | opp_overlap 5848673, overlap 5848672 5848670 GAATATATATAAGAG GGACACAAA AAT TTTGTGTCC TTATCTCAATCATTG TERM 5228 5848673 - 5848693 + T 95 -12.7 -3.5361 | opp_overlap 5848673 5848672 5848670 GAATATATATAAGAG GGACACAAA AAT TTTGTGTCC TTATCTCAATCATTG Ava_4685 5849204 - 5848731 - | hypothetical protein TERM 5229 5849427 - 5849373 - R 100 -20.5 -3.794 | gap 2, opp_overlap 5849365 5849375 5849376 5849378, overlap 5849375 5849376 TGGCAATGTATCAAA TACTTTTAGCTCCCCTAAATCACCCTT TTT AAGGGTGATTTAGGGGAGCTAAT-G-A CTTGTGTGTACACCG TERM 5230 5849426 - 5849375 - R 100 -25.6 -3.48105 | gap 1, opp_overlap 5849375 5849376 5849378, overlap 5849373 5849376 GCAATGTATCAAATA CTTTTAGCTCCCCTAAATCACCCTT TTT AAGGGTGATTTAGGGGAGCTAAT-G ACTTGTGTGTACACC TERM 5231 5849375 - 5849428 + r 100 -22.9 -3.58905 | gap 1, opp_overlap 5849375 5849373 5849376, overlap 5849376 5849378 GCAATGTATCAAATA CTT-TTAGCTCCCCTAAATCACCCTT TTT AAGGGTGATTTAGGGGAGCTAATGAC TTGTGTGTACACCGT TERM 5232 5849376 - 5849427 + r 100 -26.4 -2.75022 | gap 1, opp_overlap 5849375 5849373 5849376, overlap 5849375 5849378 CAATGTATCAAATAC TT-TTAGCTCCCCTAAATCACCCTT TTT AAGGGTGATTTAGGGGAGCTAATGA CTTGTGTGTACACCG TERM 5233 5849426 - 5849376 - R 100 -25.8 -2.68381 | opp_overlap 5849376 5849375 5849378, overlap 5849375 5849373 CAATGTATCAAATAC TTTTAGCTCCCCTAAATCACCCTT TTT AAGGGTGATTTAGGGGAGCTAATG ACTTGTGTGTACACC TERM 5234 5849378 - 5849424 + r 100 -32.8 -2.64877 | opp_overlap 5849375 5849376 5849373, overlap 5849376 5849375 ATGTATCAAATACTT TTAGCTCCCCTAAATCACCCTT TTT AAGGGTGATTTAGGGGAGCTAA TGACTTGTGTGTACA Ava_4686 5849731 - 5849498 - | signal transduction protein Ava_4687 5849918 - 5850487 + | hypothetical protein TERM 5235 5850640 - 5850623 - T 89 -11.3 -3.97645 | opp_overlap 5850616 5850615 5850625 ACCAATACAGAAGAA GACGCGA TTCA TCGCGTC TCTACATGGTTATTT Ava_4688 5851667 - 5850690 - | PRC-barrel TERM 5236 5851607 - 5851624 + g 73 -9.1 -3.53018 | overlap 5851605 ACCGTTTGCCGTTGT CGCGGGT AATT ACCTGCG TGTTTAATATGTCGG Ava_4689 5855352 - 5851726 - | condensin subunit Smc TERM 5237 5855520 - 5855536 + H 77 -10.9 -2.54166 | opp_overlap 5855523, overlap 5855519 5855518 TTGGTATAGTTTCAA TCAGCTG AGT CAGCTGA GATTTTAGTTACCAA Ava_4690 5855976 - 5857337 + | FAD-dependent pyridine nucleotide-disulphide oxidoreductase TERM 5238 5857391 - 5857425 + F 73 -6.4 -4.25283 | opp_overlap 5857396 5857397 5857400, overlap 5857397 5857400 GTGTGACCGAAGAAA TAAAAGTAGGGTGGGC AAT GCCCACCTTATTATGG TTTTGGTGGGGCAAT TERM 5239 5857420 - 5857396 - f 100 -8.5 -5.10665 | opp_overlap 5857391 5857397 5857400, overlap 5857397 5857400 ACCGAAGAAATAAAA GTAGGGTGGGC AAT GCCCACCTTAT TATGGTTTTGGTGGG TERM 5240 5857419 - 5857397 - f 93 -12 -3.64772 | opp_overlap 5857391 5857397 5857400, overlap 5857396 5857400 CCGAAGAAATAAAAG TAGGGTGGGC AAT GCCCACCTTA TTATGGTTTTGGTGG TERM 5241 5857397 - 5857419 + F 100 -14.2 -3.70546 | opp_overlap 5857397 5857396 5857400, overlap 5857391 5857400 CCGAAGAAATAAAAG TAGGGTGGGC AAT GCCCACCTTA TTATGGTTTTGGTGG TERM 5242 5857400 - 5857416 + F 100 -13.7 -3.96497 | opp_overlap 5857397 5857396 5857400, overlap 5857397 5857391 AAGAAATAAAAGTAG GGTGGGC AAT GCCCACC TTATTATGGTTTTGG TERM 5243 5857416 - 5857400 - f 93 -13.7 -2.61398 | opp_overlap 5857400 5857397 5857391, overlap 5857397 5857396 AAGAAATAAAAGTAG GGTGGGC AAT GCCCACC TTATTATGGTTTTGG TERM 5244 5857546 - 5857529 - f 88 -11.3 -3.71848 | opp_overlap 5857520 5857531 CCTTTGGATGAAGAA GACGCGA TGAA TCGCGTC TCTACAAATGGTTTA TERM 5245 5857712 - 5857766 + F 100 -11 -4.78149 | opp_overlap 5857714 5857715, overlap 5857715 TACTTATTAGCCTGA AATTTGTGGAATAGGTATCTTGCTTT ATG GAGGCAAAATACTTATTCCACAATTA TTTTTAGCTTATAAG TERM 5246 5857764 - 5857714 - f 82 -10.7 -3.58343 | opp_overlap 5857712 5857715, overlap 5857715 CTTATTAGCCTGAAA TTTGTGGAATAGGTATCTTGCTT TATGG AGGCAAAATACTTATTCCACAAT TATTTTTAGCTTATA TERM 5247 5857715 - 5857763 + F 100 -17.1 -4.48792 | opp_overlap 5857714 5857715, overlap 5857712 TTATTAGCCTGAAAT TTGTGGAATAGGTATCTTGCTTT ATG GAGGCAAAATACTTATTCCACAA TTATTTTTAGCTTAT TERM 5248 5857763 - 5857715 - f 95 -14.2 -2.74792 | opp_overlap 5857715 5857712, overlap 5857714 TTATTAGCCTGAAAT TTGTGGAATAGGTATCTTGCTT TATGG AGGCAAAATACTTATTCCACAA TTATTTTTAGCTTAT Ava_4691 5858107 - 5859468 + | FAD-dependent pyridine nucleotide-disulphide oxidoreductase TERM 5249 5859488 - 5859520 + T 93 -12.2 -3.7732 | gap 1, opp_overlap 5859485 TCCATGATTAATTCC GTCGTAGGGTTGTGC AAGT GTACAACCCTAC-AC TTATTGATATAAAAA TERM 5250 5859557 - 5859591 + T 85 -10 -3.89903 | opp_overlap 5859554 5859557 TCTGTATAGAAATTA TGCGATCGCCTAAC TATCCAT GAGAGGCGATCGCA TTTATAAAAATATTT TERM 5251 5859591 - 5859557 - T 76 -10 -3.06418 | opp_overlap 5859557, overlap 5859554 TCTGTATAGAAATTA TGCGATCGCCTAAC TATCCAT GAGAGGCGATCGCA TTTATAAAAATATTT Ava_4692 5859997 - 5859614 - | hypothetical protein Ava_4693 5860115 - 5860813 + | glutathione S-transferase-like protein Ava_4694 5860951 - 5861442 + | hypothetical protein TERM 5252 5861518 - 5861482 - f 80 -11 -3.15257 | opp_overlap 5861486, overlap 5861478 5861474 5861486 TTTGAAATACAGATA GCAATGCCCACC TTATTATGGTATT GGTGGGCATTGC CTACCCTACGTACTG Ava_4695 5861663 - 5862151 + | hypothetical protein Ava_4696 5867953 - 5862200 - | GAF sensor hybrid histidine kinase TERM 5253 5866127 - 5866142 + g 84 -5.4 -5.26875 | GTTGAGTTGATCTAC CATCGT GTTG ACGGTG TTTTTTAATTCGAGA TERM 5254 5866400 - 5866418 + g 75 -6 -4.62069 | GGAACTCAGTTGATC CACCATGA TAT TGATGGTG TTTTTCAACTCCAAA TERM 5255 5866676 - 5866694 + g 71 -2.4 -5.08824 | GGAATTAAGTTGATC CACCATTG TAT TAATAGTG TTTTTTAACTCCAAA TERM 5256 5867881 - 5867905 + g 72 -6.5 -4.26019 | overlap 5867876 AATCACCTTTTTTGA CAGCAGTTAAA GTT TTTAATAGCTG TTTTAAGTCTAATTC Ava_4697 5868645 - 5869412 + | hypothetical protein TERM 5257 5869506 - 5869546 + G 86 -2.5 -5.86061 | overlap 5869508 TTGGTTTACGGTTGA CAGGTCTGTTGCAGTTA CTAGAGT TAGCAGCATTAGACCAG TTTTTTTTACTGCGA TERM 5258 5870802 - 5870820 + G 75 -9 -3.58343 | overlap 5870790 CCCCTGAACAGGTGG TACAGATT CTC AATCTGTA TTTGGGGGTGATGAC TERM 5259 5871536 - 5871546 + G 73 -5.4 -4.59342 | opp_overlap 5871536 AAGGTGATGAAACAA TCTG ATG CAGA TTTGTTTATCATCCG Ava_4698 5869409 - 5871616 + | adenylate/guanylate cyclase Ava_4699 5872849 - 5871620 - | glycosyl transferase, group 1 Ava_4700 5873029 - 5873979 + | hypothetical protein TERM 5260 5875031 - 5875020 - g 74 -4.4 -5.055 | opp_overlap 5875020, overlap 5875022 CCAACCCCCAAAAAA TTCC GGTG GGAA TTGTCACCGAGCGGG TERM 5261 5875915 - 5875904 - g 71 -4.4 -4.75372 | ACTACCCACCAAAAA TTGC AGGA GCAA CTAATCGCCCTTCAG TERM 5262 5877916 - 5877932 + G 73 -5.1 -4.63218 | TTCTAGCTACCTCAG TGCCAAA GGC TATGGCA TTTTGTTAGCAACAA Ava_4701 5874401 - 5878225 + | multi-sensor hybrid histidine kinase Ava_4702 5878222 - 5879367 + | response regulator receiver Signal transduction histidine kinase TERM 5263 5879416 - 5879427 + T 78 -5.8 -4.79949 | CGTCTAATTGTAGAG GGCT TGAA AGCC TTGTTTTTTTCAGGG Ava_4703 5880304 - 5879543 - | hypothetical protein TERM 5264 5880307 - 5880297 - G 76 -2.6 -5.33405 | opp_overlap 5880297 TCTACTAAAGAAAAA TTAA TCA TTAA TTCACTCCTATATTG Ava_4704 5881686 - 5880304 - | hypothetical protein TERM 5265 5881913 - 5881882 - R 75 -8.8 -3.54543 | gap 1 AGTGACTTTTGGAAA TCTCCCACTACATCC GCA GGGT-TAGCGGGAGA AGATGTCAAGAAGTT Ava_4705 5882290 - 5881919 - | hypothetical protein Ava_4706 5882503 - 5884266 + | 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylic acid synthase/2-oxoglutarate decarboxylase Ava_4707 5884701 - 5884369 - | hypothetical protein Ava_4708 5885905 - 5885018 - | Alpha/beta hydrolase fold Ava_4709 5886121 - 5886432 + | microcompartments protein Ava_4710 5886521 - 5886874 + | microcompartments protein TERM 5266 5887044 - 5887010 - T 100 -17.4 -3.01511 | opp_overlap 5887015, overlap 5887015 AATTAAACATTAAAG CAAAACCCCGATTTCT TAG AGAAATCGGGGTTTTT AGATCGAACATTGTT TERM 5267 5887015 - 5887039 + T 100 -17.3 -4.65895 | opp_overlap 5887010 5887015 AACATTAAAGCAAAA CCCCGATTTCT TAG AGAAATCGGGG TTTTTAGATCGAACA TERM 5268 5887039 - 5887015 - T 100 -17.3 -4.61284 | opp_overlap 5887015, overlap 5887010 AACATTAAAGCAAAA CCCCGATTTCT TAG AGAAATCGGGG TTTTTAGATCGAACA Ava_4711 5887327 - 5887061 - | hypothetical protein Ava_4712 5888287 - 5887412 - | Sulfate ABC transporter, permease protein CysW Ava_4713 5889326 - 5888274 - | Sulfate ABC transporter, permease protein CysT TERM 5269 5889235 - 5889249 + g 74 -4.3 -4.91473 | CTCAAAAATTTTACC CATAG GATTA CTATG TTTATTTTTGAGTTA TERM 5270 5889324 - 5889297 - G 76 -10.6 -2.92038 | gap 1, opp_overlap 5889296 GCCAAAAGTATCAGA GTGT-TGGTGGGC GAT GCCCACCCTACAC ATACTTAAGTATCTA Ava_4714 5890531 - 5889386 - | thiosulphate-binding protein TERM 5271 5890888 - 5890902 + H 90 -2.8 -6.11243 | opp_overlap 5890888 TTCATAGTTCAAAGA TTCGTA TAT TCCGAA TTTTTTTTCTTGACT TERM 5272 5891014 - 5890975 - H 93 -6.7 -5.63103 | gap 2, opp_overlap 5890989, overlap 5890976 5890977 TTCTAAGTAAAAAAA CGGGGCAATAAGTTGTATT TTCT AATACT-CTTATTGCCC-G AAGTTCATATTGTCT TERM 5273 5891014 - 5890976 - H 71 -6.9 -3.96777 | gap 1, opp_overlap 5890989, overlap 5890975 5890977 TCTAAGTAAAAAAAC GGGGCAATAAGTTGTATT TTCT AATACT-CTTATTGCCCG AAGTTCATATTGTCT TERM 5274 5891013 - 5890977 - H 78 -10.4 -2.96982 | gap 1, opp_overlap 5890989, overlap 5890975 5890976 CTAAGTAAAAAAACG GGGCAATAAGTTGTATT TTCT AATACT-CTTATTGCCC GAAGTTCATATTGTC Ava_4715 5891084 - 5892220 + | thiosulphate-binding protein TERM 5275 5892286 - 5892245 - T 95 -13.3 -3.39595 | opp_overlap 5892245 5892251, overlap 5892251 TTGAACTACTTATAA GACAAAGCTGTTTATGA TTGTCATT TCATAGACAGCTTTGTC TTTTGCTTAAGTAGA TERM 5276 5892245 - 5892286 + T 100 -15.5 -4.43477 | opp_overlap 5892245 5892251, overlap 5892251 TTGAACTACTTATAA GACAAAGCTGTTTATGA TTGTCATT TCATAGACAGCTTTGTC TTTTGCTTAAGTAGA TERM 5277 5892251 - 5892280 + T 79 -7.3 -4.50859 | opp_overlap 5892251 5892245, overlap 5892245 TACTTATAAGACAAA GCTGTTTATGA TTGTCATT TCATAGACAGC TTTGTCTTTTGCTTA Ava_4716 5897799 - 5892373 - | Serine/threonine protein kinase and Signal transduction histidine kinase (STHK) with GAF sensor TERM 5278 5892847 - 5892819 - G 80 -9 -4.07568 | opp_overlap 5892810 5892826 GCCTTTGCTGCAAAA TCATGAGGGTAT TATCG ATACCTTCATGA ATATCAACTTCTTTA TERM 5279 5894296 - 5894279 - G 76 -9.9 -3.26814 | overlap 5894277 5894275 5894290 5894292 TAAAAGTAGAAGATA GGCACAA CAAA TTGTGCC GTAGCACCACTAATA TERM 5280 5897612 - 5897573 - G 83 -10.9 -3.56092 | TGATGAGTTTCCAAA CTGATAACCTTGACAAT ATTTGG ATGGTCAAGGTTAGCAG AGATAGAATATTCGT Ava_4717 5899478 - 5898135 - | FAD linked oxidase-like TERM 5281 5899764 - 5899822 + r 72 -3.8 -4.9725 | opp_overlap 5899767, overlap 5899773 5899774 TAAATTATCCGGAAT TGACGATTTGGTAGGGTGCGTCAGTA CGATATA TACTGACGCACCCTACATTTTGGATA TTTTTATCTGGAAGT TERM 5282 5899818 - 5899767 - R 75 -10.3 -2.53382 | gap 1, opp_overlap 5899764 5899773 5899774 ATTATCCGGAATTGA CGATTTGGTAGGGTGCGTCAGTAC GATAT ATACTGACGCACCCTAC-ATTTTG GATATTTTTATCTGG TERM 5283 5899773 - 5899813 + r 100 -18.5 -4.37991 | opp_overlap 5899767, overlap 5899764 5899774 CGGAATTGACGATTT GGTAGGGTGCGTCAGTA CGATATA TACTGACGCACCCTACA TTTTGGATATTTTTA TERM 5284 5899774 - 5899812 + r 100 -22 -3.21168 | opp_overlap 5899767, overlap 5899773 5899764 GGAATTGACGATTTG GTAGGGTGCGTCAGTA CGATATA TACTGACGCACCCTAC ATTTTGGATATTTTT Ava_4718 5900575 - 5899841 - | hypothetical protein Ava_4719 5901302 - 5900613 - | hypothetical protein Ava_4720 5902313 - 5901534 - | glutamine amidotransferase, class-II TERM 5285 5901824 - 5901851 + g 74 -4.9 -4.82901 | overlap 5901825 TTGCCGCTAATGTTT TTGTAACCTGT TGCAAT ACAGGATACAG TTTTTCTAGGGAGGG Ava_4721 5904195 - 5902681 - | anthranilate synthase, component I TERM 5286 5903554 - 5903567 + g 75 -2.4 -5.252 | overlap 5903545 GCTGCCTGGGGGTGT CCAT TCTAAT ATGG TTTTTTGTGGCGATA Ava_4722 5904762 - 5904343 - | photosystem I protein PsaD Ava_4723 5906877 - 5904865 - | GAF sensor Signal transduction histidine kinase TERM 5287 5905253 - 5905267 + g 75 -8.6 -3.78962 | overlap 5905251 CAATCACCGTCTGCT CTTACC AAG GGTAAG TTTCCGTCTATTTGG TERM 5288 5907359 - 5907372 + H 87 -2.4 -6.01187 | CGTAGTTGAATATTC GCTA CTCTGC TAGC TTTTTTTGTTTGATT TERM 5289 5907963 - 5907973 + G 82 -6.8 -4.75288 | CTGAATGATGGCAAC CCCA GTA TGGG TTTATTTTGCTGTGA TERM 5290 5909158 - 5909142 - g 70 -8.1 -3.62275 | ACCTACCACCGCAAA TCTAAAC GCG GTTTAGA TAACCAAGGGTGGAA Ava_4724 5907759 - 5910041 + | Amylo-alpha-1,6-glucosidase TERM 5291 5910104 - 5910061 - T 90 -9 -4.58395 | opp_overlap 5910064 5910065 5910068, overlap 5910045 5910044 5910065 5910068 CTGATTTCTCAAAAA TCAAGACTGTAGAGACGTTG CACG CAACGTCTCTACATCGTTTA TTAGTGCAATTTCAT TERM 5292 5910064 - 5910100 + T 91 -11.8 -4.25458 | gap 1, opp_overlap 5910045 5910044 5910061 5910065 5910068, overlap 5910065 5910068 ATTTCTCAAAAATCA AGACTGTAGAGACGTTG CACG CAACGTCTCTACA-TCG TTTATTAGTGCAATT TERM 5293 5910099 - 5910065 - T 100 -15.3 -3.80855 | gap 1, opp_overlap 5910064 5910065 5910068, overlap 5910044 5910061 5910068 TTTCTCAAAAATCAA GACTGTAGAGACGTTG CACG CAACGTCTCTACA-TC GTTTATTAGTGCAAT TERM 5294 5910065 - 5910099 + T 100 -15.3 -3.14552 | gap 1, opp_overlap 5910044 5910065 5910061 5910068, overlap 5910064 5910068 TTTCTCAAAAATCAA GACTGTAGAGACGTTG CACG CAACGTCTCTACA-TC GTTTATTAGTGCAAT TERM 5295 5910097 - 5910068 - T 100 -18.1 -2.6838 | opp_overlap 5910065 5910064 5910068, overlap 5910065 5910061 CTCAAAAATCAAGAC TGTAGAGACGTTG CACG CAACGTCTCTACA TCGTTTATTAGTGCA TERM 5296 5910068 - 5910097 + T 100 -18.1 -3.12942 | opp_overlap 5910068 5910065 5910061, overlap 5910065 5910064 CTCAAAAATCAAGAC TGTAGAGACGTTG CACG CAACGTCTCTACA TCGTTTATTAGTGCA Ava_4725 5913261 - 5910148 - | polymorphic membrane protein TERM 5297 5911770 - 5911790 + g 70 -3.9 -4.84642 | overlap 5911773 CGGCTATAGTATCGC CTCTCACCG CAA CAGTGATAG TTTTGTTGGTTTCCC TERM 5298 5913630 - 5913595 - R 79 -10.6 -3.14132 | opp_overlap 5913581 GGTTGGGTGGAGGAA CGGAACCCAACA TTCTCAAGACTT TGTTGGGTTCCG CTATCGCTCCACCCA Ava_4726 5916175 - 5913695 - | Na-Ca exchanger/integrin-beta4 TERM 5299 5914156 - 5914143 - G 71 -3.1 -4.92757 | opp_overlap 5914143, overlap 5914138 CTATTAACAACAAAA TCAGC TTTT ACTGA TTGTGTCACCCCTCG TERM 5300 5916526 - 5916506 - R 100 -11.9 -5.37043 | opp_overlap 5916504 ACTTTATATAAAAAA CGAGGGAAT ATA ATCCCCTCG CATATTCACTAAAAC Ava_4727 5919647 - 5916564 - | glycerophosphoryl diester phosphodiesterase TERM 5301 5919802 - 5919785 - H 85 -2.7 -5.85737 | opp_overlap 5919785, overlap 5919788 AGATTAAGAAAAAAA TAAGTTC AAAA GAACTAA TGGTTAAAATACTGT TERM 5302 5919799 - 5919788 - H 74 -4.4 -4.96435 | opp_overlap 5919785, overlap 5919785 TTAAGAAAAAAATAA GTTC AAAA GAAC TAATGGTTAAAATAC TERM 5303 5925125 - 5925141 + G 73 -7.3 -4.07687 | GGGTGGCGATACCGT TGCTAGT ATC ACTGGCA TTTTAGACCACCGCT Ava_4728 5920029 - 5927069 + | endonuclease/exonuclease/phosphatase TERM 5304 5927080 - 5927116 + T 100 -14.8 -3.55444 | gap 1, opp_overlap 5927087, overlap 5927087 5927115 CTTAAACTTTCTTTC CAAACAACCCCAGTTTT TCAA AAAACTGGGGTT-TTTG TTTAGGGAATACCAA TERM 5305 5927087 - 5927110 + T 100 -14 -5.27335 | opp_overlap 5927087, overlap 5927080 TTTCTTTCCAAACAA CCCCAGTTTT TCAA AAAACTGGGG TTTTTGTTTAGGGAA TERM 5306 5927110 - 5927087 - T 100 -14 -3.90744 | opp_overlap 5927087 5927080 TTTCTTTCCAAACAA CCCCAGTTTT TCAA AAAACTGGGG TTTTTGTTTAGGGAA Ava_4729 5927351 - 5927160 - | hypothetical protein Ava_4730 5928325 - 5927567 - | thioesterase TERM 5307 5928393 - 5928360 - R 73 -5.5 -4.63218 | gap 1, overlap 5928363 5928383 TTTTTCTCAATAAAA CTA-TTGTAGAGAAGT TAA ACCTATCTACAAATAG AAAATGGGAAATTAT Ava_4731 5931500 - 5928453 - | hypothetical protein TERM 5308 5929752 - 5929742 - G 71 -4.6 -4.58395 | TTGATTGGCTAAAAA GCCC AGT GAGC AGCAATATCCCAATT TERM 5309 5930130 - 5930142 + g 71 -4.1 -4.81082 | GAAAAATTTATTGAG TAGCT TTT GGCTA TTTTCTTGATTAATT Ava_4732 5934319 - 5931587 - | hypothetical protein Ava_4733 5936166 - 5934340 - | von Willebrand factor, type A TERM 5310 5936182 - 5936197 + r 78 -6.2 -4.8543 | GGATAGATGTCTCCA GTCATA AATT TATGAC TTTTTCTAGAAATTA Ava_4734 5936474 - 5936226 - | XRE family transcriptional regulator Ava_4735 5940106 - 5937017 - | acriflavin resistance protein TERM 5311 5937435 - 5937409 - G 70 -5.2 -4.43501 | overlap 5937411 AACCCATCGATAAAA TAGCAACCACTA GAA TAATGCTTGCCA ACCGAAAAGAACTAA TERM 5312 5939299 - 5939315 + g 74 -4.4 -4.98531 | AGGCTAATTCTCTAG GGGGAT CTAAA ATTCCC TTTTTAATTTGGGCA TERM 5313 5940100 - 5940112 + g 70 -2.7 -4.92783 | TTTGATAAAAAAGAT TATTC ATA GGATA TTTTTATCGTAAATT Ava_4736 5941852 - 5940320 - | secretion protein HlyD Ava_4737 5942933 - 5941950 - | hypothetical protein TERM 5314 5942008 - 5941992 - G 70 -8 -3.71378 | GAGGCGAGAGCCAAA GGCTAG TAAAC CTAGCC CCAAAAAGCCAATGG Ava_4738 5944168 - 5943185 - | hypothetical protein Ava_4739 5945172 - 5944423 - | hypothetical protein TERM 5315 5944977 - 5944967 - G 82 -6.8 -4.75174 | GACCCAATGGAAAAA CCTG GAG CAGG AAGTGCGGTATTCTC TERM 5316 5945433 - 5945447 + H 91 -5 -5.82316 | CAATATTTATCATTG GTAACT TCA GGTTAC TTTTTTTTGAATGCT TERM 5317 5945804 - 5945826 + H 70 -6.5 -4.06864 | opp_overlap 5945804 5945802, overlap 5945782 5945781 TTTTTTATCGAAATA CAAAAATAA ATCAC TTATTTTTG TTATTGTTATATAAG Ava_4740 5946354 - 5947187 + | AraC family transcriptional regulator Ava_4741 5947324 - 5947581 + | phosphopantetheine-binding TERM 5318 5947720 - 5947747 + F 73 -9.8 -2.52543 | overlap 5947724 CTGAAATATAGGTAG GGAAGCCATTGC GTTA GCGGAGGCTTCC TCCCTTGGGGGAGCT TERM 5319 5950964 - 5950946 - g 75 -5.4 -4.82154 | AATCTACAGCAAAAA TTACTCAA GAT TTAAGTAA TGCCCGTTATGGAAT Ava_4742 5948134 - 5951568 + | Beta-ketoacyl synthase Ava_4743 5953103 - 5951535 - | transposase IS4 TERM 5320 5952058 - 5952071 + g 74 -6.7 -4.3129 | opp_overlap 5952058 GTTGCTTGCCAACTA GTTCC GGGG GGAAC TTTTCCTACTAAATC TERM 5321 5953836 - 5953869 + G 72 -9.5 -3.1371 | overlap 5953835 ATACAGTTAAATTCT CCCAAGTTGCGTGGA ATTA TTCACGCAGCCGGGG TATTAAATGATTGTT Ava_4744 5953329 - 5954804 + | Short-chain dehydrogenase/reductase SDR TERM 5322 5955014 - 5955004 - g 79 -3.2 -5.30155 | overlap 5955005 GCATCAAGGAAAAAA TGGC ATT ACCA CAGTACCGCCCCAAC Ava_4745 5954819 - 5959582 + | Beta-ketoacyl synthase TERM 5323 5960794 - 5960810 + G 70 -5.8 -4.30833 | TGATGCACTTTGTTC CTTCCC TGTTT GGGGAG TTTATTAGTGCTTTA TERM 5324 5961688 - 5961700 + G 73 -5.5 -4.62984 | overlap 5961689 CTCCTTATCAGTGGT TGGGT TAT ACCCG TTTTCTCTATCATCA Ava_4746 5959995 - 5962946 + | amino acid adenylation TERM 5325 5963004 - 5962969 - f 76 -9.2 -3.40907 | GTACACTAAGAGGAA CGAAACCCAACA TCTACAGGCTTT TGTTGGGTTTCG CTATCGCTCCACCCA TERM 5326 5963148 - 5963134 - f 77 -2.8 -5.48213 | overlap 5963128 TAGGGAAAACAAAAA TGTCCA TCT TTGACA AAGAATAATCTATGG TERM 5327 5963544 - 5963527 - g 71 -4.9 -4.67234 | ATTGAACCCCAAAAA GTCTGTT TTGC AACAAAC ACCCATTGCCATTAT TERM 5328 5964305 - 5964293 - g 70 -2.7 -5.00616 | opp_overlap 5964278 GCTTTTTCTAAAAAA GACTA TCT TAATC CCTTTGATGCCACAT TERM 5329 5964687 - 5964699 + G 75 -9.1 -3.73224 | ACACCAAAGCTGCTG CTGGC GCT GCCAG TTTAATCAAAGCTAC Ava_4747 5963498 - 5967316 + | Beta-ketoacyl synthase Ava_4748 5967376 - 5968083 + | hypothetical protein TERM 5330 5968188 - 5968212 + F 72 -8.5 -3.64371 | opp_overlap 5968189, overlap 5968189 AAAACCCCTCTCCAA ACCTCTCCCCT ACA AGGAGAGAGGC TTTAAAATCTCCATT TERM 5331 5968189 - 5968211 + F 84 -12 -2.7814 | opp_overlap 5968189, overlap 5968188 AAACCCCTCTCCAAA CCTCTCCCCT ACA AGGAGAGAGG CTTTAAAATCTCCAT TERM 5332 5968211 - 5968189 - f 100 -14.2 -3.5394 | opp_overlap 5968189 5968188 AAACCCCTCTCCAAA CCTCTCCCCT ACA AGGAGAGAGG CTTTAAAATCTCCAT Ava_4749 5968612 - 5970366 + | Short-chain dehydrogenase/reductase SDR Ava_4750 5970419 - 5975236 + | Beta-ketoacyl synthase Ava_4751 5975417 - 5976994 + | 2-nitropropane dioxygenase, NPD TERM 5333 5977186 - 5977158 - g 78 -5.4 -4.93877 | opp_overlap 5977164 TCTGATGAAACAAAA TAACATCAATGA TATTG TCATTGGTGCTA ACTCTACACTCTACT Ava_4752 5977033 - 5978199 + | major facilitator transporter TERM 5334 5978419 - 5978444 + F 72 -8.3 -3.60925 | overlap 5978414 TCATTTTCCGCGATT GGGGTGCTTGT TATT ACAGGTATCCC TTCGTCTTTTTGCGG TERM 5335 5978697 - 5978687 - f 78 -6.8 -4.62712 | overlap 5978689 AAAAAATACAATAAA CTCC TTC GGAG TAAAGGTTTGTCAAG Ava_4753 5978948 - 5980840 + | PAS/PAC sensor hybrid histidine kinase Ava_4754 5980930 - 5981433 + | molybdopterin synthase subunit MoaE TERM 5336 5981511 - 5981480 - T 90 -8.8 -4.65895 | overlap 5981481 TCGTCTAGGTAAAAA CTTACCCCACAGCT TCTA AACTATGGGGTAAT GGCAACGATTTTCGC TERM 5337 5981510 - 5981481 - T 89 -12.3 -3.39216 | overlap 5981480 CGTCTAGGTAAAAAC TTACCCCACAGCT TCTA AACTATGGGGTAA TGGCAACGATTTTCG Ava_4755 5982344 - 5981535 - | peptidoglycan binding domain-containing protein TERM 5338 5981725 - 5981738 + g 72 -8.1 -3.75718 | CTTAGTGTTACAGGG CCACC GATT GGTGG TTGGTTTTGGTTCCC Ava_4756 5983560 - 5982559 - | peptidase M23B Ava_4757 5984855 - 5983992 - | 2,3-dimethylmalate lyase TERM 5339 5984943 - 5984929 - R 74 -2.8 -5.2696 | opp_overlap 5984929 5984930, overlap 5984930 TCAAAATTTAAAAAA TCAGAT GCT ATCTGG GTTTTACTTGAATTC Ava_4758 5985692 - 5985003 - | Short-chain dehydrogenase/reductase SDR Ava_4759 5986634 - 5985969 - | nitroreductase Ava_4760 5987834 - 5986737 - | flavin oxidoreductase/NADH oxidase TERM 5340 5987237 - 5987210 - G 79 -7 -4.64676 | gap 1, overlap 5987211 5987212 TTACTTCTAATAAAA GTCGGGCGCGATT CTC AATCGCACCCC-C ATACTCGTCTGTACG TERM 5341 5987236 - 5987212 - G 76 -10.7 -2.62512 | overlap 5987210 5987211 ACTTCTAATAAAAGT CGGGCGCGATT CTC AATCGCACCCC CATACTCGTCTGTAC Ava_4761 5988301 - 5987969 - | thioredoxin Ava_4762 5988379 - 5988717 + | ArsR family transcriptional regulator Ava_4763 5988786 - 5989085 + | hypothetical protein Ava_4764 5989196 - 5991436 + | Serine/threonine protein kinase with Chase2 sensor Ava_4765 5991476 - 5992501 + | hypothetical protein TERM 5342 5992548 - 5992517 - T 91 -6.5 -5.4111 | opp_overlap 5992517, overlap 5992518 AAGAAGTATAAAAAA GCGGGCTAACCGC TATGAT GTGGTTAACCCGT GCAGCTTTGGGAACG TERM 5343 5992547 - 5992518 - T 84 -10 -3.82226 | opp_overlap 5992517, overlap 5992517 AGAAGTATAAAAAAG CGGGCTAACCGC TATGAT GTGGTTAACCCG TGCAGCTTTGGGAAC Ava_4766 5992927 - 5992577 - | hypothetical protein TERM 5344 5992984 - 5993006 + r 86 -5.4 -5.31877 | opp_overlap 5992984 TTTTTTTTCAGGGAA GCCGCGCATA ATG TGGGAGCGGC TTTTTTCTCGTAACT TERM 5345 5993103 - 5993076 - R 79 -8.5 -4.12942 | gap 1 GGAAAGCTTTTAAAA CTCCATGCGCTG GTATT CAGCG-ACGGAG GCTGCGGCGGGTCTT Ava_4767 5994581 - 5993070 - | AAA ATPase, central region Ava_4768 5995018 - 5994671 - | hypothetical protein Ava_4769 5995211 - 5995786 + | hypothetical protein Ava_4770 5997511 - 5995943 - | transposase IS4 TERM 5346 5996466 - 5996479 + g 74 -6.7 -4.3129 | opp_overlap 5996466 GTTGCTTGCCAACTA GTTCC GGGG GGAAC TTTTCCTACTAAATC TERM 5347 5997680 - 5997656 - R 72 -9.3 -2.72511 | opp_overlap 5997645 5997658, overlap 5997655 TCCACTGTTCCAAAC TCTTGAGGGGC TTA ACCCCTCAATA ATTCGCCAACAGTAT TERM 5348 5997658 - 5997678 + r 78 -11.2 -2.71011 | opp_overlap 5997656 5997655, overlap 5997645 CACTGTTCCAAACTC TTGAGGGG CTTAA CCCCTCAA TAATTCGCCAACAGT TERM 5349 5997748 - 5997726 - R 76 -6.2 -4.5774 | GAGTAATAATTAAAA CCTCTGTCCT TGC AGGGGAGAGG TTGGGAGAGGGGTTT Ava_4771 5999342 - 5997786 - | metallophosphoesterase Ava_4772 6000369 - 5999398 - | putative lipid kinase Ava_4773 6000619 - 6001026 + | hypothetical protein hemC 6001201 - 6002211 + | porphobilinogen deaminase glgA 6002332 - 6003750 + | glycogen synthase TERM 5350 6003899 - 6003855 - T 81 -11.5 -2.57931 | opp_overlap 6003854, overlap 6003863 TTGATTTTGGAGAAT TGGTATAAGGGTGTGAGGGTT TTT AACTCTTACACCCCTACACCC CTATTAAAGAACTGT TERM 5351 6003891 - 6003863 - T 80 -10.3 -3.34233 | opp_overlap 6003854, overlap 6003855 GGAGAATTGGTATAA GGGTGTGAGGGTT TTT AACTCTTACACCC CTACACCCCTATTAA Ava_4776 6004979 - 6003903 - | magnesium-protoporphyrin IX monomethyl ester cyclase Ava_4777 6005828 - 6005184 - | Allergen V5/Tpx-1 related TERM 5352 6005895 - 6005929 + r 100 -14.4 -3.36803 | opp_overlap 6005901 6005915, overlap 6005900 6005901 6005920 6005923 ACATTGTGACCTCTC TCCAAACCTCTCTCCT ACA AGGAGAGAGGCTTTGA TTCTCACTCCCCTTC TERM 5353 6005900 - 6005924 + r 95 -12.9 -4.00868 | opp_overlap 6005901 6005915, overlap 6005895 6005901 6005920 6005923 GTGACCTCTCTCCAA ACCTCTCTCCT ACA AGGAGAGAGGC TTTGATTCTCACTCC TERM 5354 6005901 - 6005923 + r 100 -16.4 -3.00039 | opp_overlap 6005901 6005915, overlap 6005900 6005895 6005920 TGACCTCTCTCCAAA CCTCTCTCCT ACA AGGAGAGAGG CTTTGATTCTCACTC TERM 5355 6005923 - 6005901 - R 100 -16.4 -3.53444 | opp_overlap 6005901 6005900 6005895 6005920, overlap 6005915 TGACCTCTCTCCAAA CCTCTCTCCT ACA AGGAGAGAGG CTTTGATTCTCACTC TERM 5356 6005932 - 6005967 + r 79 -10.4 -3.20326 | gap 1, opp_overlap 6005915, overlap 6005923 6005920 AGAGAGGCTTTGATT CTCAC-TCCCCTTCCCT TGT AGGGAAGGGGTTGGGGG TTAGGTCTGTATTTG Ava_4778 6006759 - 6006058 - | Allergen V5/Tpx-1 related Ava_4779 6007086 - 6010673 + | multi-sensor hybrid histidine kinase Ava_4780 6011460 - 6010777 - | Short-chain dehydrogenase/reductase SDR TERM 5357 6011413 - 6011399 - G 77 -6.4 -4.63218 | CCTTCTTGAATAAAA CGCTCT GTC AAAGCG TAACCCAGACCTCGG TERM 5358 6011655 - 6011681 + H 78 -9.4 -3.54181 | opp_overlap 6011638 6011653 6011654, overlap 6011657 TACCTTCCTAGAAGT TTTCCCCCTGAA TAA TTCAGGGGGATC TTACTGTTTTCAGCT TERM 5359 6011657 - 6011679 + H 100 -16.4 -3.33884 | opp_overlap 6011638 6011653 6011654, overlap 6011655 CCTTCCTAGAAGTTT TCCCCCTGAA TAA TTCAGGGGGA TCTTACTGTTTTCAG TERM 5360 6011873 - 6011898 + H 77 -8.5 -3.87412 | gap 1, opp_overlap 6011879 6011881, overlap 6011879 6011881 CTCCAATCAATAGCT GAAAA-ACTCAC TCT GTGAGTGTTTTC TTAATTTTTAATGTT TERM 5361 6011879 - 6011891 + H 76 -7.7 -4.04459 | opp_overlap 6011879 6011881, overlap 6011873 6011881 TCAATAGCTGAAAAA CTCAC TCT GTGAG TGTTTTCTTAATTTT TERM 5362 6011891 - 6011879 - H 84 -7.7 -4.66953 | opp_overlap 6011879 6011873 6011881, overlap 6011881 TCAATAGCTGAAAAA CTCAC TCT GTGAG TGTTTTCTTAATTTT TERM 5363 6011881 - 6011893 + H 89 -7.7 -4.93177 | opp_overlap 6011879 6011881, overlap 6011879 6011873 AATAGCTGAAAAACT CACTC TGT GAGTG TTTTCTTAATTTTTA TERM 5364 6012611 - 6012622 + G 74 -4.4 -5.01732 | opp_overlap 6012610 6012611 6012601 AGATACTGCAAAAAC GTGT ACAC ACAC TTTTTTACAACAGTT Ava_4781 6011923 - 6012753 + | MCP methyltransferase, CheR-type Ava_4782 6012753 - 6013325 + | CheB methylesterase Ava_4783 6013330 - 6015372 + | PAS/PAC sensor hybrid histidine kinase trmB 6016071 - 6015424 - | tRNA (guanine-N(7))-methyltransferase Ava_4785 6016505 - 6017626 + | peptidase M50 TERM 5365 6017660 - 6017680 + F 100 -14.1 -5.89827 | opp_overlap 6017660 GCTCCTTCTCTCAAA TCCCTCAGA AAT TCTGAGGGA TTTTTTTTAATCATT TERM 5366 6017680 - 6017660 - f 100 -14.1 -3.53012 | opp_overlap 6017660 GCTCCTTCTCTCAAA TCCCTCAGA AAT TCTGAGGGA TTTTTTTTAATCATT Ava_4786 6018013 - 6018348 + | putative monovalent cation/H+ antiporter subunit C TERM 5367 6018803 - 6018818 + G 74 -4 -4.93877 | CTATCTGTTTATCAG CAACGT AGCC ATGTTG TTTTATTTGGTAGGC Ava_4787 6018345 - 6019772 + | putative monovalent cation/H+ antiporter subunit D Ava_4788 6019769 - 6020158 + | hypothetical protein TERM 5368 6020257 - 6020240 - g 78 -5.5 -5.02476 | opp_overlap 6020240 ATATCTGGCAAAAAA TGTTGGC ATTA GCCAGCA TCTGCTCCAAATCTG Ava_4789 6020155 - 6020406 + | hypothetical protein TERM 5369 6020958 - 6020989 + G 78 -7.4 -4.56775 | opp_overlap 6020957 TGATGCGGGAAGTAG TTTTGGGCAACTCA TGGA TGAGTTACGCAAAA TTTTTGGCAAACGCT Ava_4790 6020674 - 6021243 + | hypothetical protein Ava_4791 6021240 - 6021902 + | putative monovalent cation/H+ antiporter subunit B Ava_4792 6022008 - 6022868 + | hypothetical protein Ava_4793 6024319 - 6022994 - | extracellular ligand-binding receptor TERM 5370 6023301 - 6023311 + g 80 -4.6 -5.15969 | GGTGCGAATTCTCCT GGCG CAC TGCC TTTTTTCGATTGCCA TERM 5371 6024162 - 6024180 + g 76 -10.3 -3.0094 | ATTTTTAGCCCTGAC CCACCAC TGGCT GTGGTGG TATCTGTGGCTGGGG Ava_4794 6025662 - 6024730 - | phytoene synthase Ava_4795 6027085 - 6025646 - | zeta-carotene desaturase / three-step phytoene desaturase Ava_4796 6027318 - 6028037 + | lipolytic protein TERM 5372 6028163 - 6028176 + G 71 -2.3 -5.1675 | overlap 6028164 AAATCTCTTGGCGTG ATGGC GATC GCCAC TTTTTTGGTAACTGG Ava_4797 6028121 - 6028954 + | polysaccharide deacetylase TERM 5373 6029457 - 6029471 + G 71 -5 -4.67234 | TTTGTGTTTTGTGGA GCTAAA CTT TTTGGC TTTTTACCATTACCT Ava_4798 6029190 - 6029624 + | hypothetical protein TERM 5374 6029650 - 6029705 + T 74 -9.8 -2.73159 | opp_overlap 6029656 6029677 6029679 6029681 6029684, overlap 6029649 6029704 ATTAAACAAATGATC AGTAGAGTCGGCAATGCCCATC AAGAAGATATAC GGTGGGCATTGCCCACCCTACA ATTTAGACAAGTTGA TERM 5375 6029705 - 6029679 - T 85 -11.6 -3.44284 | opp_overlap 6029650 6029649 6029704, overlap 6029656 6029677 6029681 6029684 TGCCCATCAAGAAGA TATACGGTGGGC ATT GCCCACCCTACA ATTTAGACAAGTTGA TERM 5376 6029703 - 6029681 - T 89 -12 -3.29142 | opp_overlap 6029650 6029649, overlap 6029656 6029679 6029677 6029684 CCCATCAAGAAGATA TACGGTGGGC ATT GCCCACCCTA CAATTTAGACAAGTT TERM 5377 6029700 - 6029684 - T 91 -13.7 -2.51625 | opp_overlap 6029650 6029649, overlap 6029656 6029681 6029679 6029677 ATCAAGAAGATATAC GGTGGGC ATT GCCCACC CTACAATTTAGACAA Ava_4799 6029974 - 6029726 - | hypothetical protein Ava_4800 6030072 - 6030527 + | hypothetical protein Ava_4801 6031307 - 6030813 - | hypothetical protein TERM 5378 6031184 - 6031171 - G 70 -8.1 -3.7108 | opp_overlap 6031170 ACCCTCAGAGTTAAA CTGGC ATTT GCCAG ATAGTATAGGTATTC TERM 5379 6031267 - 6031306 + g 88 -9.3 -4.33248 | overlap 6031268 GATTGGTATCCCGGT AGGGTAAATGCCCCCGT CTTTGC ATGGGGGAGTTTACCCA TTTATTATCAAATTG TERM 5380 6031268 - 6031305 + g 95 -12.8 -3.19226 | overlap 6031267 ATTGGTATCCCGGTA GGGTAAATGCCCCCGT CTTTGC ATGGGGGAGTTTACCC ATTTATTATCAAATT queA 6031425 - 6032651 + | S-adenosylmethionine:tRNA ribosyltransferase-isomerase TERM 5381 6032862 - 6032872 + F 91 -6.8 -5.27779 | TTGGGTGTTCTCTGC GCTG CAT CAGC TTTTTTGGTGTTGGC TERM 5382 6033431 - 6033419 - g 71 -9.1 -3.25515 | overlap 6033417 AGGTAAAATGGAAGA GGCGA TCG TCGCC TATAGAGAAGTTTTG Ava_4803 6032895 - 6033917 + | tetratricopeptide TPR_3 TERM 5383 6034195 - 6034219 + T 100 -13.7 -5.46698 | opp_overlap 6034179 GCCATAAAATTTTTG TATGACGGGTA ATT TGCCCGTCATA TTTTTTGGTTTTAAA Ava_4804 6034925 - 6034230 - | TrkA-N Ava_4805 6036366 - 6035098 - | K+ transporter Trk Ava_4806 6036651 - 6037493 + | cyclopropane-fatty-acyl-phospholipid synthase Ava_4807 6041396 - 6037533 - | multi-sensor hybrid histidine kinase TERM 5384 6038367 - 6038339 - G 75 -10.3 -2.8372 | opp_overlap 6038350, overlap 6038338 CATTTGTGAGTAAAT TCCAGATCACCTG CTG CAAGCGTTCTGGA TCACCGGAAACCTGG TERM 5385 6040441 - 6040417 - G 80 -10.1 -3.58329 | overlap 6040409 6040418 TAAATATCTGCGAAA GCAATGCCAAT AAT ATTGGCATTGA CAAGGCTTTTCAGTT TERM 5386 6040440 - 6040418 - G 93 -13.6 -2.74515 | overlap 6040409 6040417 AAATATCTGCGAAAG CAATGCCAAT AAT ATTGGCATTG ACAAGGCTTTTCAGT TERM 5387 6042344 - 6042357 + H 73 -2.3 -5.28778 | TAAATAATGATTTAT CAGTG TGTC CACAG TTTTTTCTAACTGAT TERM 5388 6042897 - 6042914 + G 71 -9.9 -2.64735 | AGAGGCAGTCGCGTC CGCATAC TTGT GTATGCG TGCTATCGATGAAAT Ava_4808 6042793 - 6043623 + | farnesyl-diphosphate farnesyltransferase Ava_4809 6044487 - 6043702 - | RDD Ava_4810 6045408 - 6044554 - | hypothetical protein Ava_4811 6045490 - 6046455 + | hypothetical protein Ava_4812 6046676 - 6047143 + | heat shock protein Hsp20 TERM 5389 6047155 - 6047210 + T 73 -10.1 -2.52676 | opp_overlap 6047157 6047160 TTAAAGCTAGGGGAA TAGTATTGAGTGCTGAGTGGA-TGTCT TAAT AGACAATTCACTCAGCACTCGACG-TA TGAGTTCAGACGATG TERM 5390 6047206 - 6047160 - T 95 -14.7 -2.75074 | gap 1, opp_overlap 6047155, overlap 6047157 GCTAGGGGAATAGTA TTGAGTGCTGAGTGGA-TGTCT TAAT AGACAATTCACTCAGCACTCGA CGTATGAGTTCAGAC Ava_4813 6051676 - 6047243 - | WD-40 repeat-containing protein TERM 5391 6049701 - 6049685 - G 72 -7.3 -3.9941 | opp_overlap 6049685 6049686, overlap 6049686 CTCTTCAGAATCAAA CTGTTGC ATT GCAACAA TTCCTGACTGCTCTA TERM 5392 6050549 - 6050532 - G 75 -5.5 -4.82901 | GCTTCCGCATAAAAA GACGGAC GCAA ATCCGCC AATGCCCTATCTACC Ava_4814 6053292 - 6051688 - | hypothetical protein TERM 5393 6053787 - 6053799 + H 76 -7.7 -4.14652 | TTCTCGTGTGTTCTG TGCCA AGT TGGCA TTTAGTGTTTTTCCT Ava_4815 6053912 - 6054163 + | hypothetical protein Ava_4816 6054172 - 6055200 + | hypothetical protein Ava_4817 6056755 - 6055253 - | glycerol kinase Ava_4818 6057247 - 6056879 - | pentapeptide repeat-containing protein Ava_4819 6057551 - 6057237 - | hypothetical protein TERM 5394 6057718 - 6057700 - R 74 -10.2 -2.68799 | overlap 6057680 6057672 ACCAAACCTATATTA TGGTGGGC AAT GCCCACCC TACCAAATCAAATAG Ava_4820 6058347 - 6057778 - | hypothetical protein Ava_4821 6058677 - 6059108 + | hypothetical protein Ava_4822 6059745 - 6059098 - | hypothetical protein TERM 5395 6059883 - 6059902 + H 81 -5.7 -5.2189 | ATATAGCTTTCTCTA TGTCCCG CAAGTA TGGGACA TTTTTTGGTGGTTGG Ava_4823 6060195 - 6060350 + | hypothetical protein Ava_4824 6060462 - 6062138 + | Beta-Ig-H3/fasciclin TERM 5396 6062201 - 6062165 - T 91 -9.5 -4.50841 | opp_overlap 6062171, overlap 6062166 6062168 AGAATAATAGCAAAA CCAGAACCCCGATGTTT TGA AGAAATCGGGGTTCTAA AATTAATTAAAAATA TERM 5397 6062200 - 6062166 - T 80 -10.8 -3.28878 | opp_overlap 6062171, overlap 6062165 6062168 GAATAATAGCAAAAC CAGAACCCCGATGTTT TGA AGAAATCGGGGTTCTA AAATTAATTAAAAAT TERM 5398 6062198 - 6062168 - T 80 -11.2 -3.18991 | opp_overlap 6062171, overlap 6062166 6062165 ATAATAGCAAAACCA GAACCCCGATGTTT TGA AGAAATCGGGGTTC TAAAATTAATTAAAA TERM 5399 6062171 - 6062195 + T 76 -9.3 -3.38178 | opp_overlap 6062168 6062166 6062165 ATAGCAAAACCAGAA CCCCGATGTTT TGA AGAAATCGGGG TTCTAAAATTAATTA TERM 5400 6062269 - 6062327 + T 100 -15.5 -2.75536 | gap 2, opp_overlap 6062267, overlap 6062270 6062289 AAACATCTAAGTATT T--GTAGGGTGGTCATTGCCCACCGTATC ACG GTTTTGGTGGGCAATGCCCACCCTACTGA ATTTGCGAATCGTTT TERM 5401 6062270 - 6062324 + T 100 -26.6 -2.64803 | opp_overlap 6062267, overlap 6062269 6062289 AACATCTAAGTATTT GTAGGGTGGTCATTGCCCACCGTATC ACG GTTTTGGTGGGCAATGCCCACCCTAC TGAATTTGCGAATCG TERM 5402 6062289 - 6062299 + T 73 -6.8 -4.2558 | opp_overlap 6062267, overlap 6062270 6062269 GGTGGTCATTGCCCA CCGT ATC ACGG TTTTGGTGGGCAATG Ava_4825 6065389 - 6062360 - | tetratricopeptide TPR_3 TERM 5403 6062781 - 6062802 + g 70 -8.1 -3.58533 | CCATGAGTTGCCAGA TGGACGATT TTGT AATCGTTCA TTTGGGGGATTGTAA Ava_4826 6065458 - 6066039 + | hypothetical protein Ava_4827 6066051 - 6066506 + | hypothetical protein Ava_4828 6067100 - 6066549 - | hypothetical protein Ava_4829 6068233 - 6067133 - | ABC transporter-like TERM 5404 6067201 - 6067181 - G 71 -3.4 -4.92756 | gap 1 AGGATCAAAAATAAA CAACT-GAT TTAA ATCGAGTTG TAAAGAAAGGCGATC TERM 5405 6067507 - 6067485 - G 88 -9.2 -4.3586 | CCATTGACATCAAAA CCTGCAAGTT GAT AAGTTGCAGG CAGAATATTCATCGG Ava_4830 6069152 - 6068313 - | GUN4-like TERM 5406 6069976 - 6069966 - g 74 -6.8 -4.31692 | AACCCATCAGCAAAA CTGG TTC CCAG CGCCTAGTACGTCGC Ava_4831 6069341 - 6070762 + | isocitrate dehydrogenase TERM 5407 6070849 - 6070815 - f 100 -15.8 -3.14344 | opp_overlap 6070820 6070823, overlap 6070818 6070820 6070823 CATTCTCTTTATTAA TGAGACAAGGGTGAGC AAT GCTCACCCTTGTCTTC CCCTAACTATACGAT TERM 5408 6070846 - 6070818 - f 100 -21.9 -2.77899 | opp_overlap 6070820 6070823, overlap 6070815 6070820 6070823 TCTCTTTATTAATGA GACAAGGGTGAGC AAT GCTCACCCTTGTC TTCCCCTAACTATAC TERM 5409 6070844 - 6070820 - f 100 -18.7 -2.93723 | opp_overlap 6070820 6070823, overlap 6070818 6070815 6070823 TCTTTATTAATGAGA CAAGGGTGAGC AAT GCTCACCCTTG TCTTCCCCTAACTAT TERM 5410 6070820 - 6070844 + F 100 -18.7 -3.06671 | opp_overlap 6070820 6070818 6070815 6070823, overlap 6070823 TCTTTATTAATGAGA CAAGGGTGAGC AAT GCTCACCCTTG TCTTCCCCTAACTAT TERM 5411 6070841 - 6070823 - f 100 -14.6 -3.61404 | opp_overlap 6070820 6070823, overlap 6070820 6070818 6070815 TTATTAATGAGACAA GGGTGAGC AAT GCTCACCC TTGTCTTCCCCTAAC TERM 5412 6070823 - 6070841 + F 100 -14.6 -3.67611 | opp_overlap 6070823 6070820 6070818 6070815, overlap 6070820 TTATTAATGAGACAA GGGTGAGC AAT GCTCACCC TTGTCTTCCCCTAAC TERM 5413 6071625 - 6071649 + F 80 -2.2 -5.60993 | gap 2 CTTTAATATTTAGAT GCGGTCGCCCTA CCG TA-GGC-ATCGC TTTTTTTATCCGACC TERM 5414 6072510 - 6072496 - f 74 -2.9 -5.36441 | overlap 6072475 TTTTGACACAAAAAA TTAGT GAAGT ACTAA AATTGACCATTACAC TERM 5415 6072601 - 6072580 - f 80 -5.9 -4.99035 | opp_overlap 6072582, overlap 6072583 GTATTGATATAAAAA GATTTTTGC CGGG GCAAAAGTC TATCAAGCATCCGTT Ava_4832 6072713 - 6074134 + | sugar transferase TERM 5416 6075638 - 6075648 + G 71 -6.8 -4.208 | TACCAGACTATATGT TGCC ATC GGCA TTTATGGTTTTAGAA Ava_4833 6074194 - 6076077 + | amino acid adenylation TERM 5417 6077326 - 6077309 - g 78 -9.9 -3.406 | TCAACACGCAATTAA CTCCTTG GCCG CAAGGAG AAACGCCCAGGCGTG TERM 5418 6080056 - 6080038 - g 89 -3.8 -5.60993 | CGTGGTACAAAAAAA CTGCGA TCGATTC CCGCAG CCCCTGGTATCCCCC Ava_4834 6076081 - 6081021 + | Beta-ketoacyl synthase Ava_4835 6081152 - 6081979 + | hypothetical protein TERM 5419 6082082 - 6082116 + G 81 -5.1 -5.16841 | overlap 6082074 6082083 6082086 CCTCTGACTTCTATA CGAGGTATTGCAGCT TTATC AGTTGTAATACTTCA TTTTTCTTACTATGC TERM 5420 6082083 - 6082115 + G 73 -8.6 -3.6902 | overlap 6082074 6082082 6082086 CTCTGACTTCTATAC GAGGTATTGCAGCT TTATC AGTTGTAATACTTC ATTTTTCTTACTATG Ava_4836 6082040 - 6083191 + | acyltransferase 3 Ava_4837 6083299 - 6086580 + | amino acid adenylation Ava_4838 6086577 - 6090887 + | amino acid adenylation TERM 5421 6090920 - 6090888 - g 72 -7.1 -4.01158 | opp_overlap 6090895 6090903 AATGTTAGTAAATAA GTTAACACAAGGGAT TAC AACCTTTGTATTAAC TGCGGCTATAGCTCG TERM 5422 6091871 - 6091893 + G 70 -7.8 -3.5936 | TTTCGGGAATATTTG GCTATTTGTT GAT AGCAAATGGC TTTGAAAAATTTAAC Ava_4839 6090874 - 6092271 + | polysaccharide biosynthesis protein Ava_4840 6092280 - 6093293 + | glycosyl transferase family protein TERM 5423 6093963 - 6093985 + G 74 -6.3 -4.43877 | overlap 6093962 CAGCGAATTAACGTC CTACCTCAC GGAGA GTTAGGTAG TTTGTTTCAAAGTTG Ava_4841 6093465 - 6094589 + | glycosyl transferase, group 1 Ava_4842 6094586 - 6095887 + | O-antigen polymerase TERM 5424 6096280 - 6096313 + G 70 -7.7 -3.67389 | gap 1, opp_overlap 6096280 GCAACATATCAAGAA TTTTTTGCCG-ATCTT CCT AAGATACTGCAAAAAA TTATATCTAATTTAT TERM 5425 6096313 - 6096280 - g 72 -7.7 -3.82205 | gap 1, opp_overlap 6096280 GCAACATATCAAGAA TTTTTTGCCG-ATCTT CCT AAGATACTGCAAAAAA TTATATCTAATTTAT TERM 5426 6096752 - 6096763 + G 85 -4.4 -5.49568 | opp_overlap 6096739, overlap 6096743 GAGATGCTCTGATAG CATC AGCA GATG TTTTTGTTTTACCTT Ava_4843 6095926 - 6097113 + | glycosyl transferase, group 1 Ava_4844 6097194 - 6097979 + | glycosyl transferase WecB/TagA/CpsF Ava_4845 6098040 - 6099410 + | parallel beta-helix repeat-containing protein TERM 5427 6100900 - 6100885 - g 70 -7.6 -3.60884 | opp_overlap 6100891, overlap 6100879 CTGAAAAGACCAGAA TGCTGA TTGC TCAGCA ATTAAATCAACCCAA TERM 5428 6101311 - 6101293 - g 70 -2.5 -4.98911 | gap 1, overlap 6101297 TATTACAAAAACAAA CTAACCAA ATTA TTGGT-AG TCAAGTAAAACTACC Ava_4846 6100353 - 6102581 + | lipopolysaccharide biosynthesis Ava_4847 6104079 - 6102994 - | glycoside hydrolase family protein TERM 5429 6104291 - 6104267 - H 79 -8.5 -4.11664 | opp_overlap 6104268, overlap 6104268 GGCATAATAATTAAA GCCTCTCTCCT TGC AGGGGAGAGGT TTGGAGAGGGGTTTT TERM 5430 6104268 - 6104290 + H 100 -14.2 -3.5394 | opp_overlap 6104267 6104268 GCATAATAATTAAAG CCTCTCTCCT TGC AGGGGAGAGG TTTGGAGAGGGGTTT TERM 5431 6104290 - 6104268 - H 85 -12 -3.06276 | opp_overlap 6104268, overlap 6104267 GCATAATAATTAAAG CCTCTCTCCT TGC AGGGGAGAGG TTTGGAGAGGGGTTT TERM 5432 6104431 - 6104442 + H 71 -4.4 -4.73613 | TCTCTTAACAAGATG CTGA TTAA TCAG TTTTATTAATCATGA TERM 5433 6104503 - 6104535 + G 71 -7 -4.08992 | CATGAGTCTTTTATT CTCGTGAGCGAG TATCAAAAC CTCGCCCATGAG TCTTTTATTCTTGTA Ava_4848 6104464 - 6104781 + | hypothetical protein TERM 5434 6104892 - 6104858 - T 81 -11.4 -2.62158 | opp_overlap 6104852 6104864 6104887, overlap 6104857 CCAAAGAATCAAGAT TTTAAGCCTCTCCCCG CGT CGGGGAGAGGTTTGGA GAGGGGTTCTTCCAA TERM 5435 6104864 - 6104886 + T 100 -19.2 -3.53761 | opp_overlap 6104858 6104857, overlap 6104852 AATCAAGATTTTAAG CCTCTCCCCG CGT CGGGGAGAGG TTTGGAGAGGGGTTC Ava_4849 6107962 - 6105041 - | pentapeptide repeat-containing protein TERM 5436 6106265 - 6106285 + g 73 -7.5 -4.21194 | opp_overlap 6106260 6106265, overlap 6106274 CTGCACAACACAAAC CGCAGCTTC CAT GAGGATGCG TTTTAAATCCTCAGG TERM 5437 6107231 - 6107241 + g 73 -5.4 -4.71382 | CTCAAAAGGTTTCTG CTCA ATA TGAG TTTTTAAATAATTAT TERM 5438 6108123 - 6108101 - R 100 -19.2 -3.53761 | overlap 6108089 GAACCCCTCTCCAAA CCTCTCCCCG ACG CGGGGAGAGG CTTAAAACCCTGATT TERM 5439 6108160 - 6108194 + r 100 -15.8 -3.19192 | opp_overlap 6108159 TACTCAGTTATAGAT TTTCAGCCCCTTCCCT TGT AGGGAAGGGGTTGGGG TTAGGTTCCGTCGAA Ava_4850 6110090 - 6108360 - | pentapeptide repeat-containing protein TERM 5440 6110843 - 6110826 - g 76 -2.7 -5.28826 | AAAGGCCAGAAAAAA TTTGGGT AATT AACCAAA ATCAACAGGTCAAGG TERM 5441 6110910 - 6110896 - g 71 -3.4 -4.94902 | GAATGATCATAAAAA GGCAGC ACA GCAACC ATTTCTACAAGTTGG Ava_4851 6110564 - 6113596 + | hypothetical protein Ava_4852 6114408 - 6113671 - | hypothetical protein TERM 5442 6114472 - 6114460 - R 88 -7.7 -4.7373 | TCAGTTTATGAAAAA TAGCG CCT CGCTA ACTAGCTAAAGCTCA Ava_4853 6114885 - 6114625 - | hypothetical protein Ava_4854 6116407 - 6115184 - | peptidase-like TERM 5443 6118090 - 6118105 + G 74 -7.6 -3.93695 | AAATTCCGTTGCTTT TTCTCC TAAT GGAGAA TTTCTAGCTAGTGGC Ava_4855 6116894 - 6118924 + | WD-40 repeat-containing serine/threonin protein kinase Ava_4856 6120110 - 6118941 - | aromatic amino acid beta-eliminating lyase/threonine aldolase Ava_4857 6120266 - 6121852 + | phospholipase D/transphosphatidylase Ava_4858 6122420 - 6121953 - | gluconate kinase Ava_4859 6123169 - 6122444 - | sugar fermentation stimulation protein A TERM 5444 6123104 - 6123116 + g 73 -9.1 -3.54424 | opp_overlap 6123104 TACATCAGCGAAAAA GCGCT TAT AGCGC TTTAGCAAAATGCCA TERM 5445 6123116 - 6123104 - G 100 -9.1 -4.69664 | opp_overlap 6123104 TACATCAGCGAAAAA GCGCT TAT AGCGC TTTAGCAAAATGCCA Ava_4860 6123641 - 6124309 + | hypothetical protein TERM 5446 6124334 - 6124382 + T 74 -9.8 -2.59742 | gap 1, opp_overlap 6124344 6124368, overlap 6124333 6124337 GTATCAATTGCATAA CTATTGATAAGGGCTGTTAACTG TCAA CAGTCAACAACCCTTA-CGATGG ATTGTGCAACTTAAA TERM 5447 6124373 - 6124344 - T 100 -13.7 -3.40309 | opp_overlap 6124337 6124334 6124333, overlap 6124368 CATAACTATTGATAA GGGCTGTTAACTG TCAA CAGTCAACAACCC TTACGATGGATTGTG gltX 6125838 - 6124393 - | glutamyl-tRNA synthetase TERM 5448 6126235 - 6126191 - R 78 -8.7 -3.71107 | opp_overlap 6126198 CATGAAAATGAAACA TCAAGGGTATAGGGGTATAAA TGT TTGAAACCCCTACATCCTTAA ACCCTTACACCCCCA TERM 5449 6126362 - 6126310 - R 75 -9.4 -3.25459 | gap 1, overlap 6126313 AGTAAGGGGAGAAGA GAAGCAGGGGAAGAGA-AAAATTAT GAAA ATAACCTCCTTTCCTCCCCTGCCTC CTCTGCTTCCCCTGC TERM 5450 6126359 - 6126313 - R 72 -7.5 -3.76226 | gap 1, overlap 6126310 AAGGGGAGAAGAGAA GCAGGGGAAGAGA-AAAATTAT GAAA ATAACCTCCTTTCCTCCCCTGC CTCCTCTGCTTCCCC Ava_4862 6127983 - 6126457 - | Serine/threonine protein kinase TERM 5451 6126952 - 6126963 + g 75 -3 -5.24449 | GTTTAGTGGTAGAGG GAAA ACAA TTTC TTTTTTGGGTTTATC Ava_4863 6129643 - 6128039 - | Serine/threonine protein kinase TERM 5452 6129341 - 6129360 + g 71 -2.1 -5.1675 | opp_overlap 6129341, overlap 6129333 TTTTCCTTGGAGATA CTCCATT ACATAA AAAGGAG TTTTTTCATCAGTCA TERM 5453 6129742 - 6129752 + r 81 -4 -5.47431 | ATGTACCTGTATCCG CTAA AAA TTAG TTTTTTGTGTATTGA Ava_4864 6131161 - 6129977 - | hypothetical protein Ava_4865 6132865 - 6131381 - | hypothetical protein Ava_4866 6132915 - 6134120 + | aminotransferase, class V TERM 5454 6134592 - 6134579 - g 91 -3.9 -5.89827 | overlap 6134584 AACCAGGAAAAAAAA TTGAA GAAA TTCAA TCTCAAATTAACAAT Ava_4867 6134485 - 6135573 + | HEAT repeat-containing PBS lyase Ava_4868 6135836 - 6136450 + | hypothetical protein Ava_4869 6137041 - 6136595 - | transcriptional modulator of MazE/toxin, MazF Ava_4870 6137277 - 6137035 - | transcriptional regulator/antitoxin MazE TERM 5455 6137395 - 6137351 - H 75 -8.7 -3.62224 | overlap 6137393 ACACCTTTTTAATAA TCGTTGGTCTGACGTATATAC TTT GAAGATACATCAGACAAACAA GGGGTGTCAACACCC TERM 5456 6137397 - 6137410 + H 72 -8.1 -3.53811 | opp_overlap 6137396 6137393 6137397 CATCAGACAAACAAG GGGTG TCAA CACCC TTTAGAAAAAGTGAC Ava_4871 6137698 - 6138780 + | hypothetical protein Ava_4872 6138806 - 6139129 + | hypothetical protein Ava_4873 6139300 - 6139617 + | hypothetical protein Ava_4874 6139648 - 6140061 + | hypothetical protein TERM 5457 6140576 - 6140597 + G 100 -9.5 -4.74012 | opp_overlap 6140574 6140575, overlap 6140574 CTCAGTTAAAGAATT TCCCAGGAA ATAT TTTCTGGGA TTTTGATTTTATGGT Ava_4875 6140359 - 6141108 + | hypothetical protein TERM 5458 6141746 - 6141757 + G 72 -7.2 -4.02108 | opp_overlap 6141746 6141745 TCAGTTTCAAGAAAG CCGC GATC GCGG TTTAATTCTCATCGA Ava_4876 6141108 - 6141899 + | hypothetical protein Ava_4877 6142203 - 6142418 + | hypothetical protein Ava_4878 6142562 - 6142720 + | hypothetical protein Ava_4879 6142936 - 6143247 + | hypothetical protein TERM 5459 6143305 - 6143266 - T 87 -12.2 -3.15579 | gap 1, opp_overlap 6143271, overlap 6143271 6143300 GTAAGGGGGCAGGAA GAGAAGTT-GCAAGGAGGG TTT CCCTCCGGGCAAACTTCCC TACGGGACGCTACGC TERM 5460 6143423 - 6143456 + T 89 -10.5 -4.14627 | opp_overlap 6143420, overlap 6143424 CCACAGACCACATCC TGAATCCTGAGTA ATACGTCC TACTCAGGATTCG TTATTTATATACAGA TERM 5461 6143424 - 6143455 + T 83 -11.8 -3.08294 | opp_overlap 6143420, overlap 6143423 CACAGACCACATCCT GAATCCTGAGTA ATACGTCC TACTCAGGATTC GTTATTTATATACAG Ava_4880 6145304 - 6143637 - | Beta-lactamase-like TERM 5462 6146099 - 6146066 - H 76 -7.7 -4.0802 | opp_overlap 6146090 6146092, overlap 6146092 ATTTTAATAATGAAA CATCTAAATTTTTAA ATGT TCAAAAATCTAGACG TTAGAAACTAAATCG Ava_4881 6146124 - 6146762 + | cobyrinic acid a,c-diamide synthase Ava_4882 6146798 - 6147085 + | helix-turn-helix protein, CopG Ava_4883 6147607 - 6147086 - | hypothetical protein Ava_4884 6147820 - 6149274 + | site-specific recombinase (xisC)-like TERM 5463 6150775 - 6150787 + G 91 -6.3 -5.4505 | opp_overlap 6150774 ACGCTCTGAAGAATC TCCAT ATT ATGGA TTTTTTCTTCCCAGA Ava_4885 6149364 - 6152279 + | PAS/PAC sensor Signal transduction histidine kinase ksgA 6153128 - 6153943 + | dimethyladenosine transferase Ava_4887 6154069 - 6155022 + | 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase Ava_4888 6155026 - 6155343 + | hypothetical protein Ava_4889 6156206 - 6155340 - | two component AraC family transcriptional regulator TERM 5464 6156167 - 6156144 - G 71 -4.6 -4.60889 | gap 1, opp_overlap 6156144 6156145 6156150, overlap 6156146 AAGCACCGCTAAAAA GA-GATTGCGA CTA TCGCTATCATC TTCAATAACAAGAAT TERM 5465 6156164 - 6156146 - G 72 -7.4 -3.91506 | opp_overlap 6156145 6156144 6156150, overlap 6156144 GCACCGCTAAAAAGA GATTGCGA CTA TCGCTATC ATCTTCAATAACAAG Ava_4890 6158073 - 6160259 + | anthranilate synthase Ava_4891 6160405 - 6160650 + | heterocyst formation protein HetP-like TERM 5466 6160759 - 6160723 - f 76 -5.1 -4.90266 | opp_overlap 6160757 GGGAGTAACGAAAAA CCCCCTACCAACTCACA GCT TGTTAGTAAATATGGGG TATAAGAACATAGGG TERM 5467 6160947 - 6160964 + F 76 -9.9 -2.96031 | overlap 6160946 TGCTACAGACTTTGC GCTACGT CAAT ACGTAGC ATTATTTCCAGTCGG TERM 5468 6161172 - 6161161 - g 81 -4.4 -5.40072 | TGTTTGGCAAAAAAA GCAA GAAG TTGC ACAACTACACCAACA trpC 6161090 - 6161932 + | indole-3-glycerol-phosphate synthase TERM 5469 6162081 - 6162099 + T 100 -11.7 -5.54338 | opp_overlap 6162093 6162094 6162096, overlap 6162092 6162094 TCAGCGAAACCCTGA CCCCTGG ACAAA CCAGGGG TTTTTATTTTACTTA TERM 5470 6162094 - 6162126 + T 81 -9.3 -3.81651 | opp_overlap 6162093 6162094 6162096, overlap 6162081 6162092 GACCCCTGGACAAAC CAGGGGTTTTTAT TTTACTT ATAAAATCCCCTG TATTTTGCTTGGGGT TERM 5471 6162126 - 6162094 - T 73 -9.3 -2.91593 | opp_overlap 6162081 6162094 6162092, overlap 6162093 6162096 GACCCCTGGACAAAC CAGGGGTTTTTAT TTTACTT ATAAAATCCCCTG TATTTTGCTTGGGGT Ava_4893 6162314 - 6162108 - | hypothetical protein Ava_4894 6162855 - 6162385 - | TPR repeat-containing protein TERM 5472 6163097 - 6163087 - H 88 -5.4 -5.61881 | opp_overlap 6163087 TTTTAAAAACAAAAA CTGA CTA TCAG TGATTGGCAAATTCT TERM 5473 6163490 - 6163518 + H 72 -8.3 -3.58343 | opp_overlap 6163486 6163483 6163512 ACTACTAACCAGGGC TGTTGACTGTTAA CGG TCAACAGTTAACA TTTAACAGTCCTCAC TERM 5474 6164434 - 6164416 - g 72 -6.1 -4.3739 | GATTTCTTTAGAAAA TTCAGTT ACCCA AACTGAA CGAACACTGTTGGAT Ava_4895 6164276 - 6164680 + | hypothetical protein Ava_4896 6165044 - 6164643 - | response regulator receiver domain-containing protein Ava_4897 6165660 - 6166697 + | transport system permease protein Ava_4898 6166853 - 6167644 + | ABC transporter-like Ava_4899 6168856 - 6167672 - | S-adenosylmethionine synthetase TERM 5475 6168778 - 6168764 - G 100 -10 -4.56597 | GTCTTGTTGTAAAAA GCGATC GAC GATCGC ATCACTAATCTGATC Ava_4900 6171975 - 6168967 - | ATPase, E1-E2 type TERM 5476 6170628 - 6170654 + g 77 -3.8 -5.10933 | gap 1 CTTTAATTTCTCGCG TGTTGGT-GTG AATTTC CACCACCGACA TTTTATTTTCCGTAA TERM 5477 6171832 - 6171814 - G 82 -4.6 -5.40072 | TTTTGGTGAAAAAAA TACAAGCA CAT TACCTGTA GAGATATTAGCAGAA Ava_4901 6172845 - 6173303 + | pyridoxamine 5'-phosphate oxidase-related, FMN-binding Ava_4902 6173575 - 6173913 + | hypothetical protein TERM 5478 6173937 - 6173993 + F 90 -10.4 -4.26622 | gap 1, opp_overlap 6173940 6173943 6173946, overlap 6173943 6173946 CATCGTTCTTGACAG CA-ATATCAACAGACGGAGGTATACAA CATA TTGTGTCCCTCTGTCTGTTGTTAGCTG TTTTGGATCTGGTTT TERM 5479 6173989 - 6173940 - f 87 -12.3 -3.25823 | opp_overlap 6173937 6173943 6173946, overlap 6173943 6173946 CGTTCTTGACAGCAA TATCAACAGACGGAGGTATACAA CATA TTGTGTCCCTCTGTCTGTTGTTA GCTGTTTTGGATCTG TERM 5480 6173943 - 6173986 + F 100 -18.4 -3.29187 | opp_overlap 6173943 6173940 6173946, overlap 6173937 6173946 TCTTGACAGCAATAT CAACAGACGGAGGTATACAA CATA TTGTGTCCCTCTGTCTGTTG TTAGCTGTTTTGGAT TERM 5481 6173986 - 6173943 - f 91 -14 -2.51547 | opp_overlap 6173937 6173943 6173946, overlap 6173940 6173946 TCTTGACAGCAATAT CAACAGACGGAGGTATACAA CATA TTGTGTCCCTCTGTCTGTTG TTAGCTGTTTTGGAT TERM 5482 6173983 - 6173946 - f 78 -9.9 -3.40907 | opp_overlap 6173943 6173937 6173946, overlap 6173943 6173940 TGACAGCAATATCAA CAGACGGAGGTATACAA CATA TTGTGTCCCTCTGTCTG TTGTTAGCTGTTTTG TERM 5483 6173946 - 6173983 + F 100 -14.3 -3.77264 | opp_overlap 6173946 6173943 6173940, overlap 6173943 6173937 TGACAGCAATATCAA CAGACGGAGGTATACAA CATA TTGTGTCCCTCTGTCTG TTGTTAGCTGTTTTG Ava_4903 6174291 - 6175484 + | putative ammonia monooxygenase Ava_4904 6175602 - 6175811 + | hypothetical protein TERM 5484 6176426 - 6176413 - g 79 -8.1 -4.25104 | TGCCTTGGATGAAAA TGGGC GATC GCCCA GGTAATCTTATCTAT Ava_4905 6175833 - 6176648 + | hypothetical protein Ava_4906 6176711 - 6177694 + | Short-chain dehydrogenase/reductase SDR Ava_4907 6177919 - 6177713 - | RNA-binding S4 TERM 5485 6177976 - 6177950 - R 72 -3.7 -5.03314 | gap 1, overlap 6177951 6177953 TTTATCCCTAAAAAA CGAGGACAGGTG CAAA CACCCATCC-CA CAAATATACAACACC TERM 5486 6177974 - 6177953 - R 73 -8.7 -3.38056 | overlap 6177951 6177950 ATCCCTAAAAAACGA GGACAGGTG CAAA CACCCATCC CACAAATATACAACA Ava_4908 6178370 - 6177999 - | hypothetical protein TERM 5487 6178695 - 6178655 - R 75 -8.9 -3.55444 | overlap 6178657 CCCGCATCGGTGAAA GATACCCTGCGGGTACTCC TGC GGAGAACTCGTAGAGTAGC AAGCTATGGAGAAAG TERM 5488 6178693 - 6178657 - R 78 -10.1 -3.35597 | overlap 6178655 CGCATCGGTGAAAGA TACCCTGCGGGTACTCC TGC GGAGAACTCGTAGAGTA GCAAGCTATGGAGAA Ava_4909 6179416 - 6178754 - | cadmium resistance transporter TERM 5489 6179462 - 6179441 - R 77 -2.9 -5.54079 | gap 1, opp_overlap 6179439 TTAAAAATTAAAAAA GGCAGTAGCC TAT GACTTC-GCC GAAGGCTAGGCGGGA TERM 5490 6179901 - 6179915 + r 73 -8.6 -3.45033 | opp_overlap 6179901 GATAAAAGTCAAAAA GCCTAT AGA ATAGGC TTCTCATCGATTGTC TERM 5491 6179915 - 6179901 - R 100 -8.6 -4.89729 | opp_overlap 6179901 GATAAAAGTCAAAAA GCCTAT AGA ATAGGC TTCTCATCGATTGTC Ava_4910 6180765 - 6179959 - | pentapeptide repeat-containing protein Ava_4911 6181417 - 6180776 - | hypothetical protein Ava_4912 6181619 - 6182314 + | haloacid dehalogenase-like hydrolase TERM 5492 6182344 - 6182323 - T 100 -10.1 -5.01042 | AATCTAAATTAAAAA CCCCTACCT ATCC AGGAAGGGG TCAGATTTGGAAATA Ava_4913 6183019 - 6182393 - | hypothetical protein TERM 5493 6183439 - 6183428 - H 71 -4.4 -4.82855 | CACTAAACTTAAAAA CACA CTGC TGTG GCTAAAACCCAAAGA Ava_4914 6183679 - 6184395 + | two component transcriptional regulator TERM 5494 6184726 - 6184693 - T 95 -4.6 -5.96894 | overlap 6184694 ATTTAAATAAAAAAA TTCTCATGGACACG ATATAG CGTATCCATGACAG GAATAAGTAATCATA TERM 5495 6184725 - 6184694 - T 79 -8.1 -4.15696 | overlap 6184693 TTTAAATAAAAAAAT TCTCATGGACACG ATATAG CGTATCCATGACA GGAATAAGTAATCAT Ava_4915 6185014 - 6184817 - | hypothetical protein TERM 5496 6184860 - 6184877 + g 70 -5.5 -4.46212 | opp_overlap 6184851 TAAACACGGGCAGCA CGGCGAT CGCT ATCTCCG TTTTGTAGTAAAAAC Ava_4916 6185231 - 6184998 - | hypothetical protein TERM 5497 6185450 - 6185437 - H 85 -3.9 -5.73339 | overlap 6185429 AGAATTACAAAAAAA TTATC TTTT GATAA CAATTAATCCGATGA TERM 5498 6185514 - 6185525 + G 70 -5.8 -4.30576 | TATCTCCGATACATC CCCA AATT TGGG TTTTAGTGATCGCCA TERM 5499 6186632 - 6186653 + G 77 -10.3 -3.12327 | opp_overlap 6186637, overlap 6186637 CCCCAAGCAATTACC CAAAACCTA TGGT TAGGTTTTG TCTTGAGTGTAGCGA Ava_4917 6185462 - 6186721 + | major facilitator transporter Ava_4918 6187422 - 6186772 - | bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase protein Ava_4919 6187705 - 6187511 - | ChaB TERM 5500 6187700 - 6187712 + g 91 -4.9 -5.68023 | TTCGTTGGACTTGTA TAACA TAT TGTTA TTTTTTTGGTTCTGC TERM 5501 6188433 - 6188417 - g 72 -6.5 -4.3898 | opp_overlap 6188417 6188419, overlap 6188419 ATTATTTGCAGAAAA CCGCGAT CAA ATCGCTG GTGTCATTCTCGAAC Ava_4920 6187815 - 6189113 + | glutamate-1-semialdehyde aminotransferase TERM 5502 6189154 - 6189125 - g 100 -15.2 -3.47955 | opp_overlap 6189115, overlap 6189115 CTAAATACTAAGTAA TGAGTGCTGAGT ATCATA ACTCAGCACTCA AAAATCAGAACTTTT Ava_4921 6189124 - 6189357 + | hypothetical protein Ava_4922 6189935 - 6189450 - | hypothetical protein Ava_4923 6190355 - 6191929 + | Serine/threonine protein kinase Ava_4924 6192272 - 6192976 + | FHA domain-containing protein TERM 5503 6193245 - 6193224 - T 91 -9.5 -4.62475 | opp_overlap 6193226 ATCCATAAATTAAAA GATTACCCC ATAT GGAGTAATC TTCAGATGAATCATA recA 6194422 - 6193346 - | recombinase A TERM 5504 6194321 - 6194294 - G 71 -9.8 -2.71712 | opp_overlap 6194317, overlap 6194293 CGCTCCTGTGGAAAT CGTTTCTACCCG CATC CGGGTAGCATCG CCCAGGCGCATGATT Ava_4926 6194807 - 6195892 + | twin-arginine translocation pathway signal Ava_4927 6196869 - 6195988 - | UDP-glucose pyrophosphorylase TERM 5505 6196410 - 6196424 + g 90 -2.1 -6.02914 | CGTAAATCTCTACAA CTTGT TGCGC GCAAG TTTTTTTTATGTCGG TERM 5506 6196832 - 6196845 + g 75 -5.2 -4.87052 | opp_overlap 6196826 GTACCAAAACCAGCA GCCG GAATCA CGGC TTTTCTTACTTTATG Ava_4928 6199551 - 6196882 - | multi-sensor hybrid histidine kinase TERM 5507 6200059 - 6200069 + G 73 -5.4 -4.59993 | AAACGCAATCATTTT TTGC CAG GCAA TTTATTTATAGGTTT Ava_4929 6199978 - 6200916 + | peptidase M23B Ava_4930 6201036 - 6201584 + | hypothetical protein Ava_4931 6202473 - 6201655 - | ErfK/YbiS/YcfS/YnhG Ava_4932 6202704 - 6202898 + | hypothetical protein TERM 5508 6203852 - 6203876 + G 73 -5.7 -4.57474 | overlap 6203854 GCCGAGCTATTGCGC CGCTATCAAAC CCA GGTTGATAGAG TTTTGTATCACTTAG Ava_4933 6203699 - 6204355 + | RNA polymerase sigma factor RpoE Ava_4934 6204511 - 6205116 + | transmembrane transcriptional regulator (anti-sigma factor) Ava_4935 6205547 - 6205113 - | hypothetical protein TERM 5509 6205555 - 6205541 - G 79 -3.4 -5.27335 | TGCCGTAAACAAAAA CCCGCA CTC CGCCGG AAAATTTTGTTTTTA TERM 5510 6207377 - 6207392 + G 73 -8.2 -3.71321 | opp_overlap 6207376 GTTTTTTACTAAAGT GCTGCG CGAT CGCGGC TTGTTGAACTTTGAT leuS 6205668 - 6208286 + | leucyl-tRNA synthetase TERM 5511 6208371 - 6208400 + T 100 -11.6 -5.95946 | gap 1 TCAGTTCATCATGAC TGCCGTAATACCC ACCAA GGG-ATTACGGCA TTTTTTTATTGTTAA TERM 5512 6208417 - 6208442 + T 71 -4.7 -4.58466 | opp_overlap 6208417 TTTTTTATTGTTAAA CACAGAGGTTT GACG AAAGCTCCGTG TTTTGTGGTTATGAA Ava_4937 6208895 - 6208464 - | cytidine/deoxycytidylate deaminase, zinc-binding region Ava_4938 6208912 - 6209835 + | inosine/uridine-preferring nucleoside hydrolase TERM 5513 6209934 - 6209919 - T 76 -2.4 -5.45726 | opp_overlap 6209919, overlap 6209921 GACATCCTAAAAAAA GTCCGC TTAA GCAGGC TTCATGAATGGAAAT Ava_4939 6210972 - 6210100 - | AmpD TERM 5514 6210569 - 6210587 + g 73 -8.2 -3.72576 | opp_overlap 6210564 6210561 AAAAAGTTAACTGCG CTAGTAGC AGA GTTACTAG TTTCATGGAGAACGA TERM 5515 6211089 - 6211066 - H 70 -3.2 -5.06414 | TTTTGGCAATAAAAA GTATTTCTCC AGGG AGATAAATAC GGAGATTTAATATTG Ava_4940 6211639 - 6212211 + | binding-protein dependent transport system inner membrane protein Ava_4941 6214752 - 6212215 - | hypothetical protein TERM 5516 6215330 - 6215317 - g 70 -3.8 -4.74706 | TTCAAGAGTTAAAAA TGGC GAGATT GCCA CTGACTCCATCTTTG Ava_4942 6214989 - 6215624 + | hypothetical protein TERM 5517 6215860 - 6215847 - g 71 -6.7 -4.21737 | ATCAAAACAATCAAA CTCTG GAAT CAGAG ATGAAAATATCCCAG Ava_4943 6215614 - 6216018 + | hypothetical protein Ava_4944 6216574 - 6216158 - | hypothetical protein Ava_4945 6218143 - 6216665 - | ATPase TERM 5518 6217148 - 6217180 + g 95 -12.9 -3.17688 | opp_overlap 6217147 6217150 AGTGGTATCCAAAGC CATACGTTCACATTG GGC TAGTGTGAGCGTATG TTCATGCAGTCGTTC Ava_4946 6220860 - 6218143 - | integrase catalytic subunit TERM 5519 6218658 - 6218670 + g 70 -7.7 -3.68265 | TGACTTTTATTCCCT GTCCA GGC TGGAC TTTAGCGTTGCCTTT Ava_4947 6221876 - 6221184 - | hypothetical protein Ava_4948 6225779 - 6221943 - | hypothetical protein TERM 5520 6225617 - 6225648 + g 95 -9.5 -4.42653 | opp_overlap 6225616 6225617 GGGGAATATTCAAAG CCTCTCTCTTGAT AGAGAG GTCAGGAGAGGGG TTTTCTAAATCAGGT Ava_4949 6227305 - 6225776 - | hypothetical protein TERM 5521 6227023 - 6227010 - G 77 -3.8 -5.09762 | ACGCTAACAGAAAAA CCAG TATAGT CTGG TAATAGCGTTCCTGC Ava_4950 6228002 - 6227460 - | hypothetical protein TERM 5522 6228083 - 6228037 - R 78 -11.1 -2.73771 | gap 1, opp_overlap 6228037 6228035, overlap 6228034 CTATTAGATATATGA TTCCCATGTTTGTAATCAGGAC TTAA GTCCTGACTACAAAC-TGTGCA GAACTTAGTTAACCT Ava_4951 6230661 - 6228088 - | hypothetical protein TERM 5523 6231167 - 6231189 + H 76 -9.2 -3.43511 | opp_overlap 6231169, overlap 6231165 TAAGCCCCCGGCAGA TACCCGACAA AAA TTATCGGGTA TGTTTGACTAGTGTT TERM 5524 6231187 - 6231169 - H 73 -9.6 -2.87211 | opp_overlap 6231167 6231165 AGCCCCCGGCAGATA CCCGACAA AAA TTATCGGG TATGTTTGACTAGTG Ava_4952 6231200 - 6232564 + | threonine synthase Ava_4953 6232638 - 6232913 + | thiamineS TERM 5525 6232926 - 6232953 + T 91 -11.4 -3.77437 | overlap 6232918 TGAGGTTTATCCATA CTTTTTCCCCTA ATTG TGGGGGAGAAAG TTATATATTATTAAT Ava_4954 6233314 - 6232970 - | hypothetical protein Ava_4955 6233462 - 6234502 + | L-threonine aldolase Ava_4956 6234715 - 6235332 + | hypothetical protein TERM 5526 6235367 - 6235347 - T 74 -9.7 -2.62184 | opp_overlap 6235335 6235329 6235347 GGTTTTTTTAGATTA CCGACTTCT TCA AGCAGTCGG TAATCTGAGTCCTAG TERM 5527 6235347 - 6235367 + T 74 -9.7 -2.65264 | opp_overlap 6235347, overlap 6235335 6235329 GGTTTTTTTAGATTA CCGACTTCT TCA AGCAGTCGG TAATCTGAGTCCTAG TERM 5528 6235401 - 6235434 + T 81 -8.9 -4.14243 | AGTTCATAAAAGTGA TAGGTGACGGCTCCA GTAA TGGGGTCGTTGTCTA TTTTGACGTAACCTG Ava_4957 6235873 - 6235379 - | TM2 Ava_4958 6236307 - 6237383 + | magnesium-protoporphyrin IX monomethyl ester cyclase TERM 5529 6237409 - 6237433 + F 100 -10.8 -5.71712 | TTTTTTCAATGCTCA GTGGTTCTGT TTTAC ACAGAGCCAC TTTTTTTATGTCAAA TERM 5530 6237478 - 6237461 - f 84 -11.3 -3.4745 | opp_overlap 6237463, overlap 6237451 AAAAATCTACTAGAA GACGCGA TTCA TCGCGTC TCTACAAATGGTTTA Ava_4959 6237594 - 6238427 + | hypothetical protein Ava_4960 6238439 - 6239146 + | hypothetical protein Ava_4961 6239140 - 6240126 + | hypothetical protein Ava_4962 6240149 - 6241531 + | hypothetical protein Ava_4963 6243895 - 6242426 - | pentapeptide repeat-containing protein TERM 5531 6243036 - 6243050 + g 72 -7.2 -4.05788 | TTTGCGCCTTGTATG TTTGCA CCT TGCAAA TTTGCTTTCAAAAAA Ava_4964 6244897 - 6244145 - | pentapeptide repeat-containing protein TERM 5532 6244774 - 6244790 + g 75 -2.1 -5.40072 | overlap 6244776 GGGTGATGCTATTCC GCTCACC ACA GGCGATC TTTTTTTGACCAGAA Ava_4965 6245229 - 6246413 + | ankyrin Ava_4966 6246610 - 6246915 + | hypothetical protein Ava_4967 6249129 - 6247033 - | TonB-dependent receptor TERM 5533 6247248 - 6247234 - G 73 -5.6 -4.56597 | opp_overlap 6247233, overlap 6247235 TGGTCGGTTGAAAAA GGCTCT ACG AGCGCC ACTATTGTAGGTAAC TERM 5534 6248486 - 6248499 + g 71 -2.4 -5.19212 | opp_overlap 6248486 CTACTCGTCAATTTA GGTT GTGCAA AACC TTTTTTGGTGATGAT TERM 5535 6249358 - 6249405 + r 73 -7.2 -4.11664 | gap 1, opp_overlap 6249364, overlap 6249360 6249364 6249364 TCTGTTGAGACTGGG TATAAAGGG-GTAAGGGTTTTAA AAA TTTACACCCTTACACCCTTGATG TTTGGTTGTTATGCG TERM 5536 6249398 - 6249364 - R 80 -8.6 -3.87373 | opp_overlap 6249360 6249358 6249364 6249364 GAGACTGGGTATAAA GGGGTAAGGGTTTTAA AAA TTTACACCCTTACACC CTTGATGTTTGGTTG TERM 5537 6249364 - 6249399 + r 72 -8.4 -3.51058 | gap 1, opp_overlap 6249364, overlap 6249360 6249358 6249364 GAGACTGGGTATAAA GGG-GTAAGGGTTTTAA AAA TTTACACCCTTACACCC TTGATGTTTGGTTGT Ava_4968 6250832 - 6249465 - | hypothetical protein Ava_4969 6251707 - 6250829 - | hypothetical protein TERM 5538 6252256 - 6252240 - g 78 -5.2 -5.00616 | overlap 6252243 GTTTTGGCTAAAAAA TTAGCA GATTA TGCTAA TCGCTCCAATGTGTT TERM 5539 6252413 - 6252425 + G 78 -10.5 -3.2534 | opp_overlap 6252395 6252410, overlap 6252405 6252415 GGCGTTAGCGAAGCT CCCCG GAA CGGGG TTCGCTTCTGGTGGT Ava_4970 6252192 - 6252881 + | phosphoribosyltransferase Ava_4971 6252906 - 6253115 + | hypothetical protein TERM 5540 6253149 - 6253170 + F 100 -10.2 -4.89233 | AAATACTGCTTGATT CCCTATCC TCTTGT GGATAGGG TTTTTAATATTAATG TERM 5541 6254615 - 6254585 - g 71 -9.1 -3.25823 | gap 1, opp_overlap 6254583 6254586, overlap 6254586 TCTGCTGGACAGGAA GCCTACACTGTACC GCAA GGT-CAGTGTAGGT AGTTCACTGAAAGCT TERM 5542 6254614 - 6254586 - g 86 -12.6 -2.55351 | gap 1, opp_overlap 6254583 6254586, overlap 6254585 CTGCTGGACAGGAAG CCTACACTGTACC GCAA GGT-CAGTGTAGG TAGTTCACTGAAAGC TERM 5543 6254586 - 6254614 + G 89 -12.6 -2.75064 | gap 1, opp_overlap 6254586 6254585, overlap 6254583 CTGCTGGACAGGAAG CCTACACTGTACC GCAA GGT-CAGTGTAGG TAGTTCACTGAAAGC Ava_4972 6253409 - 6254617 + | IS891/IS1136/IS1341 transposase TERM 5544 6254964 - 6254941 - f 76 -9.8 -3.04715 | opp_overlap 6254941 6254945, overlap 6254940 CATTTCTGTCAAAAG TTAATACTGA TAAA TCAGTATTAA TACGTTAAATAAATC TERM 5545 6254941 - 6254964 + F 73 -9.8 -2.55213 | opp_overlap 6254941 6254940, overlap 6254945 CATTTCTGTCAAAAG TTAATACTGA TAAA TCAGTATTAA TACGTTAAATAAATC Ava_4973 6255130 - 6255960 + | hypothetical protein TERM 5546 6256064 - 6256090 + T 100 -13.2 -4.3453 | opp_overlap 6256052 AATGGTAAATGCGTT TTCACCCATATT TAT GATATGGGTGAA TTTATGTTTAAAATT Ava_4974 6257445 - 6256177 - | TPR repeat-containing protein TERM 5547 6257726 - 6257752 + H 72 -8.2 -3.63805 | opp_overlap 6257725 6257728 CAAGAAGCTATATAT TATCCTTAAATT GCC AATTTAAGGAAA TTTAACCTATGAGAT TERM 5548 6257750 - 6257728 - H 78 -10.8 -2.7159 | opp_overlap 6257726, overlap 6257725 AGAAGCTATATATTA TCCTTAAATT GCC AATTTAAGGA AATTTAACCTATGAG Ava_4975 6257761 - 6258195 + | hypothetical protein TERM 5549 6258548 - 6258559 + G 79 -3 -5.34365 | TATGGAATAAGAATT TAAC CCAA GTTA TTTTTATTCTTATCA Ava_4976 6258271 - 6258990 + | hypothetical protein TERM 5550 6260023 - 6260041 + G 91 -10.4 -4.1711 | GCTTTCAAATCCTGC TGTCCAAA GTT TTTGGACA TTTATTGCCAATCAT Ava_4977 6259304 - 6260491 + | GCN5-related N-acetyltransferase Ava_4978 6260564 - 6261481 + | hypothetical protein Ava_4979 6261523 - 6261990 + | cupin region Ava_4980 6262086 - 6262472 + | peptidoglycan binding domain-containing protein Ava_4981 6263387 - 6262632 - | glutaredoxin-like region TERM 5551 6262774 - 6262786 + g 72 -6.3 -4.28111 | overlap 6262771 CGAGTTGTAATTCCT TTACC CAA GGTAA TTTCTTCGTACTCTA Ava_4982 6263962 - 6263591 - | hypothetical protein TERM 5552 6263695 - 6263658 - G 80 -9.9 -3.64703 | gap 1, opp_overlap 6263646 TGTGCTTTAGTCAAA GCT-GCTTGGTGGTCACT ATA AGCGCGCACCAAGCGAGC TAGACCACTTACACC TERM 5553 6264039 - 6264049 + H 76 -3.2 -5.29208 | CAAAAACACTAACCC CTAG TCT CTGG TTTATTTTTTATTTT truB 6264084 - 6264965 + | tRNA pseudouridine synthase B Ava_4984 6265144 - 6265512 + | hypothetical protein Ava_4985 6265655 - 6266038 + | steroid delta-5-3-ketosteroid isomerase TERM 5554 6266196 - 6266165 - f 72 -3.7 -5.055 | opp_overlap 6266165, overlap 6266154 CCAATTCGCAAAAAA GCCTCTGGTGATT GTATTA ATTTACCAAAGGC TTTTTCTGCAATAGT Ava_4986 6266773 - 6267285 + | hypothetical protein Ava_4987 6268028 - 6267354 - | ABC transporter-like TERM 5555 6268696 - 6268683 - g 71 -4.5 -4.66318 | overlap 6268684 ATTACGGCAAGAAAA CCCTG GAAA CAGGA CAGAAATTAGTTGCA Ava_4988 6268349 - 6269287 + | TPR repeat-containing protein Ava_4989 6271646 - 6269391 - | (p)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA Ava_4990 6271932 - 6272291 + | hypothetical protein Ava_4991 6272543 - 6272815 + | hypothetical protein Ava_4992 6272816 - 6273280 + | hypothetical protein Ava_4993 6273399 - 6275051 + | ABC transporter-like TERM 5556 6275097 - 6275114 + T 79 -11.3 -3.11192 | opp_overlap 6275099, overlap 6275099 ATTCTGGACTGTAGA GACGCGA CTCA TCGCGTC TTCACTAATGATGTG Ava_4994 6276484 - 6275165 - | FAD-dependent pyridine nucleotide-disulphide oxidoreductase TERM 5557 6276645 - 6276634 - H 70 -3 -5.1166 | CATGAAAACGAAAAA TCAA GAAC TTGA ACAAACCCTAAATCC TERM 5558 6277131 - 6277115 - g 100 -9.5 -4.63932 | CACGTCGGAATAAAA CTCAATC AGC GATTGAG AAAATTCTCACACTT TERM 5559 6277306 - 6277318 + G 73 -5.5 -4.65494 | opp_overlap 6277306 ATCATATTGATTGAA TGGCG AAT TGCCA TTTTATATCTGATTT Ava_4995 6276775 - 6278592 + | ABC transporter, transmembrane region TERM 5560 6278651 - 6278679 + T 86 -8.2 -4.4715 | gap 1, overlap 6278651 6278652 ACTTAGTCGTTCTTG CT-GGGGCGAAGT ACAA GCTTCGTCCCAAG TTTTCTCCCTTGCCC TERM 5561 6278652 - 6278677 + T 82 -11.9 -2.56203 | overlap 6278651 6278651 CTTAGTCGTTCTTGC TGGGGCGAAGT ACAA GCTTCGTCCCA AGTTTTCTCCCTTGC TERM 5562 6278909 - 6278947 + T 86 -10.7 -3.68619 | CCGGCCCACCTTCAA TTTTAGATTTTGAATTA TAACC TAGTTCAAAATCTAAGA TTTAAATAACTTCCG TERM 5563 6279003 - 6278987 - T 78 -10.9 -2.62983 | overlap 6278989 CTCAGTGGTAGAGCA CACCCTT GGT AAGGGTG AGGTCACGAGTTCAA TERM 5564 6279391 - 6279426 + T 79 -10.6 -3.16564 | TGGGTGGAGCGATAG CGGAACCCAACA AAGTCTTGAGAA TGTTGGGTTCCG TTCCTCCACTCAACC Ava_4996 6280638 - 6279595 - | coproporphyrinogen III oxidase Ava_4997 6281763 - 6281089 - | cadmium resistance transporter TERM 5565 6281190 - 6281176 - G 72 -6.4 -4.26463 | ATATATTAAGATAAA CGGAAA CAC CTTCCG ACCATAGCGAATTAG TERM 5566 6281943 - 6281963 + r 75 -6.9 -4.34402 | opp_overlap 6281943 TTATTGAATAAAAAA CCAGGTA ATTCTCA TACCTGG TTTTGATCTAAGGAA TERM 5567 6281963 - 6281943 - R 100 -6.9 -5.4833 | opp_overlap 6281943 TTATTGAATAAAAAA CCAGGTA ATTCTCA TACCTGG TTTTGATCTAAGGAA Ava_4998 6283081 - 6282410 - | glutathione S-transferase-like protein Ava_4999 6283358 - 6284107 + | Asp/Glu racemase Ava_5000 6286020 - 6284413 - | glucose-inhibited division protein A TERM 5568 6285137 - 6285159 + g 70 -2.7 -4.95484 | gap 1, opp_overlap 6285137, overlap 6285139 GGAACAAAGAAGTTA GGCTGAGATG CGCG CATC-CAGGC TTTTGTTTGCTCATC Ava_5001 6286351 - 6286055 - | 4Fe-4S ferredoxin, iron-sulfur binding TERM 5569 6286905 - 6286880 - H 76 -6.3 -4.65916 | opp_overlap 6286879 6286875 6286880 6286882 6286885 TCTATTTTAATAAAA TACAGTAAATC GATA GATTTATTGTA GTTAATATTTATTGG TERM 5570 6286940 - 6286959 + H 74 -8 -3.93136 | opp_overlap 6286940 6286943, overlap 6286943 CAGGTAATCATAGAA TAAGTGTT GTTT AACACTTA TTTGTCACTGGATAT TERM 5571 6287194 - 6287168 - H 90 -8.7 -4.56969 | opp_overlap 6287175, overlap 6287173 AATGCGACAAATAAA GTAGAGACGCG ATTCA CGCGTCTTCAC CCAATGATGTGTTGC TERM 5572 6287189 - 6287173 - H 75 -9.4 -3.16414 | opp_overlap 6287175, overlap 6287168 GACAAATAAAGTAGA GACGCG ATTCA CGCGTC TTCACCCAATGATGT TERM 5573 6287873 - 6287857 - g 76 -2.9 -5.252 | CATTGTCAGAAAAAA CTCACCT ATT AAGAGAG TTGCAGACCTCAAAG Ava_5002 6287435 - 6288478 + | ABC transporter, substrate-binding protein, aliphatic sulphonates Ava_5003 6288550 - 6289593 + | ABC transporter, substrate-binding protein, aliphatic sulphonates Ava_5004 6289793 - 6291613 + | twin-arginine translocation pathway signal Ava_5005 6291806 - 6292462 + | hypothetical protein Ava_5006 6292465 - 6293688 + | glutathione S-transferase-like protein TERM 5574 6294745 - 6294721 - g 70 -9.3 -2.88663 | opp_overlap 6294727 6294730, overlap 6294724 6294727 ATTGACCCCTATACA GAACGAGTGCC TGT GACACTGGTTC TGGAAGGGACAGTCC Ava_5007 6293752 - 6295443 + | fumarate reductase/succinate dehydrogenase flavoprotein-like Ava_5008 6295456 - 6295797 + | 4Fe-4S ferredoxin, iron-sulfur binding Ava_5009 6296826 - 6295834 - | 2OG-Fe(II) oxygenase TERM 5575 6297459 - 6297441 - g 83 -11.8 -2.80291 | opp_overlap 6297439 6297438 6297436 AAGCAGTGGATGATA GTCTGCAA AGA TTGCAGAC AGATTATATTGATTT Ava_5010 6297095 - 6298132 + | aldo/keto reductase TERM 5576 6298172 - 6298135 - f 100 -18.1 -4.4891 | gap 1, opp_overlap 6298140 6298142 6298147, overlap 6298138 TCCAGCACCATAAAA CA-AGATACCCAACTTCT CGA AGAAGTTGGGTATCTCTG AATAAAGCAAAGGTG TERM 5577 6298168 - 6298138 - f 100 -20 -4.35644 | opp_overlap 6298140 6298142 6298147, overlap 6298135 AGCACCATAAAACAA GATACCCAACTTCT CGA AGAAGTTGGGTATC TCTGAATAAAGCAAA TERM 5578 6298140 - 6298166 + F 100 -16.8 -2.91264 | opp_overlap 6298138 6298135, overlap 6298142 6298147 CACCATAAAACAAGA TACCCAACTTCT CGA AGAAGTTGGGTA TCTCTGAATAAAGCA TERM 5579 6298142 - 6298164 + F 100 -15 -3.0094 | opp_overlap 6298138 6298135, overlap 6298140 6298147 CCATAAAACAAGATA CCCAACTTCT CGA AGAAGTTGGG TATCTCTGAATAAAG TERM 5580 6298693 - 6298722 + G 73 -5.9 -4.45517 | gap 1 GGCCCCTACTGGTTT GGTGA-ATCAATTA GTC TGGTTGATTTCACC TTTTATCCCTGGTTT TERM 5581 6298828 - 6298816 - g 74 -4.1 -5.00616 | overlap 6298825 CGTCGCTGGAAAAAA GCTGT AAA ACAAC GTGATTCAGTTGTGG Ava_5011 6298246 - 6298911 + | glutathione S-transferase-like protein TERM 5582 6299927 - 6299904 - f 84 -4.6 -5.44721 | opp_overlap 6299904 ATTATTTGAAAAAAA GCTATAAGTA CATT TTCCTATAGC TCCTTAATGTCATAG TERM 5583 6300265 - 6300285 + F 86 -9.8 -4.07675 | overlap 6300268 CTCTCATCGGTTGCG TAAGGTGG TTTAT CCACCTTA TTTACTTAATTTTAC TERM 5584 6300268 - 6300282 + F 73 -7.1 -4.12947 | overlap 6300265 TCATCGGTTGCGTAA GGTGG TTTAT CCACC TTATTTACTTAATTT TERM 5585 6301176 - 6301163 - g 86 -8.1 -4.70626 | GAAGAACTGCAAAAA GCCCA AAAT TGGGC AAAAAATAACCCCAA Ava_5012 6300326 - 6301435 + | ABC transporter, substrate-binding protein, aliphatic sulphonates TERM 5586 6301551 - 6301572 + F 85 -3.7 -5.62045 | AATTACTAACAAAAA CTCTATTCG CTTT TGGGTAGAG TTTTTTATTATGTCT Ava_5013 6301683 - 6302057 + | hypothetical protein Ava_5014 6302054 - 6302854 + | ABC-type phosphate/phosphonate transport system periplasmic component-like Ava_5015 6304143 - 6302893 - | hypothetical protein TERM 5587 6304691 - 6304713 + G 100 -12 -4.29432 | TTGATGTCACCGGGA GTTGCAGCCA GAA TGGCAGCAAC TTTTGATCGCATTTC Ava_5016 6304439 - 6305584 + | aliphatic sulfonate monooxygenase Ava_5017 6306421 - 6305702 - | Serine O-acetyltransferase TERM 5588 6306805 - 6306788 - g 74 -4.1 -5.04987 | overlap 6306777 AATATGTTCAAAAAA CACCCAC AACC ATGAGTG ACATCTCTGCTAAGC Ava_5018 6306676 - 6307146 + | BadM/Rrf2 family transcriptional regulator Ava_5019 6307165 - 6308127 + | cysteine synthase Ava_5020 6308648 - 6308223 - | hypothetical protein Ava_5021 6309752 - 6308952 - | hypothetical protein TERM 5589 6310126 - 6310146 + r 91 -9.7 -4.62441 | opp_overlap 6310126 AAATTGACAACAAAA GAGCCGGAA GAA TTCCGACTC TTTATTTCTGTGCAA TERM 5590 6310146 - 6310126 - R 100 -11.9 -4.81863 | opp_overlap 6310126 AAATTGACAACAAAA GAGCCGGAA GAA TTCCGACTC TTTATTTCTGTGCAA Ava_5022 6310825 - 6310202 - | hypothetical protein TERM 5591 6310407 - 6310417 + g 71 -6.8 -4.07885 | overlap 6310405 GTGGCTGCTTGTTCT GCTG TAG CAGC TTTTCCAGGAAGATA Ava_5023 6311685 - 6310933 - | cadmium resistance transporter Ava_5024 6312055 - 6312990 + | LysR family transcriptional regulator Ava_5025 6313673 - 6312987 - | cadmium resistance transporter Ava_5026 6314518 - 6313727 - | hypothetical protein Ava_5027 6314950 - 6315717 + | phosphoesterase, PA-phosphatase related TERM 5592 6315943 - 6315954 + G 71 -2.2 -5.16071 | ACATTATTACAGAGG CTCA GAGG TGGG TTTTTCTTAGTAATT Ava_5028 6315865 - 6316293 + | hypothetical protein Ava_5029 6317131 - 6316328 - | SPFH domain-containing protein/band 7 family protein TERM 5593 6316556 - 6316566 + g 70 -5.4 -4.50159 | TGCTCTTCTAGCATC TTGC TCT GCAA TTTGTTTGGCTTCAA TERM 5594 6317365 - 6317387 + r 85 -9.2 -4.02535 | opp_overlap 6317363, overlap 6317367 AATATAGTTAAACTT TCTTGTCGTG AAG CACGACAATA TTTGCTTAATTATCA TERM 5595 6317367 - 6317385 + r 87 -11.8 -3.59634 | opp_overlap 6317363, overlap 6317365 TATAGTTAAACTTTC TTGTCGTG AAG CACGACAA TATTTGCTTAATTAT Ava_5030 6318548 - 6317724 - | Alpha/beta hydrolase fold TERM 5596 6318140 - 6318120 - G 70 -9.7 -2.54687 | opp_overlap 6318117, overlap 6318119 GGAACCAGCACGAAG CCCGTCGAA CAC TTCGATGGG TAGTCCATTAGGATT TERM 5597 6318583 - 6318601 + r 71 -7.4 -3.92963 | opp_overlap 6318583 6318584, overlap 6318577 6318584 GGTTGAACAGAAAGA TGGCTTGG CGT TCAAGCCG TTGTTCTCATTCTTC TERM 5598 6318584 - 6318600 + r 70 -8.7 -2.94694 | opp_overlap 6318583 6318584, overlap 6318583 6318577 GTTGAACAGAAAGAT GGCTTGG CGT TCAAGCC GTTGTTCTCATTCTT Ava_5031 6318974 - 6318744 - | hypothetical protein TERM 5599 6319965 - 6319979 + G 78 -10 -3.53012 | GGACTCACACCCGAT GATGGC CGC GCCATC TTTCGAGAAAAGGGA TERM 5600 6320743 - 6320714 - g 72 -10.1 -2.79831 | gap 1, overlap 6320718 TGAACTCGTAGTACA GC-AAGCCGACCTG CGC CAGGTCAACTTAGC AGGAGTCAATTTTCA TERM 5601 6320738 - 6320718 - g 76 -9.7 -3.29471 | overlap 6320714 CTCGTAGTACAGCAA GCCGACCTG CGC CAGGTCAAC TTAGCAGGAGTCAAT Ava_5032 6319113 - 6322685 + | pentapeptide repeat-containing protein Ava_5033 6322985 - 6323620 + | isochorismatase hydrolase Ava_5034 6323683 - 6324276 + | hypothetical protein Ava_5035 6324763 - 6324335 - | hypothetical protein TERM 5602 6324996 - 6324986 - H 76 -2.4 -5.50499 | TTATACTCAAAAAAA GCTG TTA CTGC ATCCTTTGGAGAAAA TERM 5603 6325287 - 6325264 - g 75 -10.4 -2.85657 | gap 1, overlap 6325261 6325266 GAGAAAATTCAAGGA TACGCGCCTGA TAT TCAGGC-CGTA CGCGATCGCGCGGAC Ava_5036 6325132 - 6325599 + | hypothetical protein Ava_5037 6325736 - 6326818 + | FAD dependent oxidoreductase Ava_5038 6326955 - 6327803 + | Alpha/beta hydrolase fold Ava_5039 6328458 - 6327808 - | lipase, class 2 Ava_5040 6328853 - 6329305 + | hypothetical protein Ava_5041 6330390 - 6329302 - | hypothetical protein TERM 5604 6330108 - 6330119 + g 73 -5.8 -4.49838 | GTTCTGCTGTTGCTT GAGC GATC GCTC TTTGTCTTTCTTCTT Ava_5042 6331256 - 6330549 - | hypothetical protein TERM 5605 6331318 - 6331342 + r 91 -11.5 -4.08689 | overlap 6331319 ATGCCATACACTTTG ACCTATCTCCT ACG AGGAGATAGGC TTTCATTCTTACCTC TERM 5606 6331319 - 6331341 + r 100 -15 -3.0449 | overlap 6331318 TGCCATACACTTTGA CCTATCTCCT ACG AGGAGATAGG CTTTCATTCTTACCT TERM 5607 6331417 - 6331459 + r 90 -12.8 -3.19192 | opp_overlap 6331414, overlap 6331420 CTCAATTGCAAACCT GAAGCGGGAGACAGGGGAAA TCT TTTTCTATGTCTCCTGCTGC TTCAATTCCCTAACC TERM 5608 6331420 - 6331456 + r 90 -13.1 -2.79188 | opp_overlap 6331414, overlap 6331417 AATTGCAAACCTGAA GCGGGAGACAGGGGAAA TCT TTTTCTATGTCTCCTGC TGCTTCAATTCCCTA Ava_5043 6333432 - 6331480 - | sulfite reductase subunit beta TERM 5609 6333671 - 6333699 + r 95 -13.3 -3.14881 | opp_overlap 6333668, overlap 6333674 TTGCAAAATCCATCG TGAGGGCTGTTGA CAG TTAACAGCCCTTA TTAGTAGAGACGTTG TERM 5610 6333674 - 6333696 + r 95 -12.8 -3.71848 | opp_overlap 6333668, overlap 6333671 CAAAATCCATCGTGA GGGCTGTTGA CAG TTAACAGCCC TTATTAGTAGAGACG TERM 5611 6333700 - 6333734 + r 91 -9.5 -4.41348 | gap 1, opp_overlap 6333668 6333708 6333710, overlap 6333702 6333703 AGTTAACAGCCCTTA TTA-GTAGAGACGTTG CATG CAACGTCTCTACATCA TTTATTTGGCGCAAC TERM 5612 6333702 - 6333731 + r 100 -13.7 -3.18452 | opp_overlap 6333708 6333710, overlap 6333700 6333703 TTAACAGCCCTTATT AGTAGAGACGTTG CATG CAACGTCTCTACA TCATTTATTTGGCGC TERM 5613 6333703 - 6333730 + r 100 -17.2 -2.50589 | opp_overlap 6333708 6333710, overlap 6333702 6333700 TAACAGCCCTTATTA GTAGAGACGTTG CATG CAACGTCTCTAC ATCATTTATTTGGCG TERM 5614 6333725 - 6333708 - R 75 -9.9 -2.82516 | opp_overlap 6333703 6333702 6333700, overlap 6333710 GCCCTTATTAGTAGA GACGTTG CATG CAACGTC TCTACATCATTTATT Ava_5044 6334755 - 6333778 - | hypothetical protein TERM 5615 6334659 - 6334669 + g 73 -8.2 -3.72576 | TGCGAGCTGCTAACG CGCC ATC GGCG TTTCCTAACGCCAAC Ava_5045 6335812 - 6337059 + | glycosyl transferase, group 1 Ava_5046 6337287 - 6337075 - | hypothetical protein Ava_5047 6338525 - 6337386 - | thiamine-phosphate pyrophosphorylase Ava_5048 6338889 - 6340601 + | hypothetical protein Ava_5049 6341456 - 6340806 - | hypothetical protein TERM 5616 6342038 - 6342019 - g 100 -10 -5.1101 | opp_overlap 6342019 TCAGCACCCAAAAAA GGATCAGC AAGT GCCGATCC TCCATTATCAGGGGC Ava_5050 6341963 - 6342622 + | hypothetical protein TERM 5617 6343106 - 6343123 + G 73 -2.7 -5.1287 | ATAGGTATGATTTCT TATTTCC TGGG GGGGATA TTTTTTGGCTATACA Ava_5051 6342806 - 6343663 + | hypothetical protein TERM 5618 6344057 - 6344042 - g 86 -10.4 -3.76125 | GGACGGCAAGCTAAA CCGGCA CCTC TGCCGG AAGAGAACCTCCAAC TERM 5619 6344805 - 6344818 + G 74 -6.7 -4.36914 | opp_overlap 6344816 TATTTGATAATCACC GCGTT GCCA AACGC TTTTCTACCAAGCGC Ava_5052 6343682 - 6344953 + | hypothetical protein Ava_5053 6346015 - 6345074 - | ADP-ribosylation/crystallin J1 Ava_5054 6348018 - 6346168 - | Serine/threonine protein kinase TERM 5620 6347593 - 6347558 - G 71 -4.1 -4.89562 | TGAAAATGAATAAAA TCGAGAACTGGTAAT AAATCA ATTAACAGTTGCCGA ATTTTTTCTTCATTA Ava_5055 6349200 - 6348406 - | binding-protein dependent transport system inner membrane protein TERM 5621 6348485 - 6348471 - G 70 -2.8 -5.03994 | overlap 6348456 TTGCAGATAGAAAAA TCAGCA AAA CACTGA GAGCATTAATATCAG TERM 5622 6349378 - 6349353 - R 73 -3.2 -5.1287 | overlap 6349357 TGCATACGCAAAAAA GAAAGGGAGT GTAACA ACTCCCTAAC GCTTCACCCGCTTTA TERM 5623 6349374 - 6349357 - R 85 -7 -5.0666 | overlap 6349353 TACGCAAAAAAGAAA GGGAGT GTAACA ACTCCC TAACGCTTCACCCGC Ava_5056 6351202 - 6349781 - | Phage integrase TERM 5624 6351301 - 6351272 - H 100 -20.9 -3.51137 | opp_overlap 6351272 6351276, overlap 6351276 AAGCATTGTACATAA TAAACCGCCTGCG TATA CGCAGGCGGTTTA TTGTGAAATGGAGAA TERM 5625 6351272 - 6351301 + H 100 -20.9 -3.32844 | opp_overlap 6351272 6351276, overlap 6351276 AAGCATTGTACATAA TAAACCGCCTGCG TATA CGCAGGCGGTTTA TTGTGAAATGGAGAA TERM 5626 6351297 - 6351276 - H 100 -17.3 -4.39329 | opp_overlap 6351272 6351276, overlap 6351272 ATTGTACATAATAAA CCGCCTGCG TATA CGCAGGCGG TTTATTGTGAAATGG TERM 5627 6351276 - 6351297 + H 100 -17.3 -4.32177 | opp_overlap 6351276 6351272, overlap 6351272 ATTGTACATAATAAA CCGCCTGCG TATA CGCAGGCGG TTTATTGTGAAATGG TERM 5628 6351311 - 6351325 + H 74 -4.2 -4.97666 | opp_overlap 6351311 6351321, overlap 6351321 GGTTTATTGTGAAAT GGAGAA ATA TTCACC TTTTTGTGATCTATT TERM 5629 6351532 - 6351478 - H 84 -10.9 -3.55563 | gap 2, opp_overlap 6351505, overlap 6351483 6351504 ATTTGATTTCTGAAA TAGACTTAGGGCAATGCCCACCACAAC CAT GATACGGTGGGCATTGCCC-AC-CCTA CAGATACTTAGATAT TERM 5630 6351528 - 6351483 - H 91 -14.1 -2.54504 | gap 1, opp_overlap 6351505, overlap 6351478 6351504 ATTTCTGAAATAGAC TTAGGGCAATGCCCACCACAAC CAT GATACGGTGGGCATTGCCC-AC CCTACAGATACTTAG TERM 5631 6352390 - 6352371 - g 82 -5 -5.32944 | CTGACAACGAAAAAA TGTTTAGG TATG CCAAAACA GAGCCTTTTGTGAGT Ava_5057 6351998 - 6353077 + | glycosyl transferase, group 1 TERM 5632 6353934 - 6353944 + G 79 -8.2 -4.15453 | CTAGGTTGTTCTCCT GGCG CTT CGCC TTTTACCATGAGTTC Ava_5058 6353289 - 6354434 + | alanine-glyoxylate aminotransferase TERM 5633 6354554 - 6354599 + F 76 -7.7 -4.15832 | opp_overlap 6354561, overlap 6354558 6354561 AATTCTGATAACTGC GACATAAGTACTGGGCGAGTT TCCT AATTCACTCAGTACTTATTAC TTATTTATGCTTACT TERM 5634 6354558 - 6354595 + F 91 -11.5 -3.66301 | opp_overlap 6354561, overlap 6354554 6354561 CTGATAACTGCGACA TAAGTACTGGGCGAGTT TCCT AATTCACTCAGTACTTA TTACTTATTTATGCT TERM 5635 6354561 - 6354592 + F 80 -8.8 -3.94141 | opp_overlap 6354561, overlap 6354558 6354554 ATAACTGCGACATAA GTACTGGGCGAGTT TCCT AATTCACTCAGTAC TTATTACTTATTTAT Ava_5059 6354733 - 6355383 + | hypothetical protein Ava_5060 6356217 - 6355624 - | multiple antibiotic resistance (MarC)-related proteins Ava_5061 6356465 - 6357280 + | Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase TERM 5636 6357384 - 6357401 + T 85 -7 -4.95758 | CGCCAATACCTATTC CCCAGT TTCAGT ACTGGG TTTTTGTGGTGTAAT Ava_5062 6357965 - 6357378 - | hypothetical protein TERM 5637 6358242 - 6358196 - R 85 -9.5 -4.08767 | opp_overlap 6358201 6358203 CTCAGGTTGTCAAAA GTCCACAGTCCACAGTCCAAG CTAGC CTTTGACTCTGGACTCTTGAC TATGGACAGCCCTCA TERM 5638 6358203 - 6358235 + r 75 -9.2 -3.12327 | opp_overlap 6358196, overlap 6358201 TGTCAAAAGTCCACA GTCCACAGTCCAAG CTAGC CTTTGACTCTGGAC TCTTGACTATGGACA TERM 5639 6358714 - 6358736 + r 76 -10.6 -2.59475 | opp_overlap 6358718, overlap 6358713 6358716 AGCGAGGAAATTTTA GAGATGGGAA AAT TACCCATCTC ATTAATATCTAGATA Ava_5063 6359090 - 6358788 - | hypothetical protein Ava_5064 6361477 - 6359165 - | Cd/Co/Hg/Pb/Zn-translocating P-type ATPase TERM 5640 6361111 - 6361088 - G 71 -9.6 -2.96395 | overlap 6361093 AGCTATCATCAGACA GCCAAGACGC GATC GCATCTTAGC ATCAGTTACAGCACT Ava_5065 6362288 - 6361581 - | hypothetical protein Ava_5066 6363481 - 6362324 - | hypothetical protein TERM 5641 6363557 - 6363569 + r 88 -4.9 -5.58522 | overlap 6363561 ACTTGTTGGTTCTCA TTCTT AAG AAGAA TTTTTATTTTGTATC Ava_5067 6364112 - 6363573 - | formylmethionine deformylase Ava_5068 6365676 - 6364426 - | peptidase S1 and S6, chymotrypsin/Hap TERM 5642 6365355 - 6365342 - G 71 -3.1 -5.03747 | AAACGGCGGAAAAAA GGATC ATTA AATCC ATCTGGAACTCTGGA