TransTermHP v2.07 (built on Jan 21 2009) 25 bins; sample size is 20000000 --pval-conf=/fs/szasmg2/carlk/TTupdate2/expterm.dat --gc=-2.3 --au=-0.9 --gu=1.3 --mm=3.5 --gap=6 --max-len=59 --min-stem=4 --max-loop=13 --min-loop=3 --uwin-length=6 --uwin-require=3 --max-hp-score=-2 --max-tail-score=-2.5 --loop-penalty=1,2,3,4,5,6,7,8,9,10,11 --start-cut=0 --end-cut=25 Genes: 0.501572 %AT, 998942 nt, 7099 terms. Intergenic: 0.506284 %AT, H2T: 158149 nt, 1179 terms; T2T: 60529 nt, 751 terms; H2H: 60718 nt, 680 terms. Each terminator entry starts in column 3 and is of the form: term # start - end +/- regionconf hp tail | notes Followed by the sequence of the 5' tail, 5' stem, loop, 3' stem, and 3' tail. Genes are interspersed, and start the first column. SEQUENCE gi|56416370|ref|NC_004842.2| Anaplasma marginale str. St. Maries, complete genome (length 1197687) TERM 1 333 - 317 - g 70 -8.7 -3.60798 | opp_overlap 317 319 ATGTCCAGAAAGTAA CAGCACC CGT AGTGCTG TGTGTCATGGTGCTG AM1359 1 - 1905 + | hypothetical protein purE 2362 - 1862 - | phosphoribosylaminoimidazole carboxylase catalytic subunit TERM 2 1994 - 1979 - G 73 -11.8 -2.61144 | opp_overlap 1967, overlap 1978 1976 GGATGCCGCAAACAC GGCGGC ATTT GCCGCC CCCGCTACTCCGATA AM002 2957 - 2355 - | hypothetical protein rodA 3113 - 4183 + | rod shape determining protein AM006 4258 - 4554 + | hypothetical protein AM007 4551 - 4925 + | hypothetical protein AM008 6119 - 5187 - | hypothetical protein AM009 6619 - 6209 - | hypothetical protein murC 6921 - 7544 + | UDP-N-acetylmuramate-alanine ligase murC 7532 - 8368 + | UDP-N-acetylmuramate-alanine ligase trpS 9384 - 8395 - | tryptophanyl-tRNA synthetase TERM 3 9099 - 9081 - G 79 -12.4 -3.25223 | GAGTCATACGATTAA GCCACCCC ATG GGGGTGAC ACATCCGAGTATCCA grpE 9875 - 9381 - | GRPE protein ribD 10097 - 11212 + | riboflavin biosynthesis protein pyrG 13168 - 11486 - | CTP synthetase secG 13510 - 13181 - | preprotein translocase subunit SecG AM020 13686 - 13946 + | hypothetical protein TERM 4 14444 - 14434 - g 71 -6.8 -4.19953 | overlap 14426 GAGTCAATGCTAAAA GAGC AGC GCTC AGATGTGGGGCATTT xerD 13939 - 14877 + | integrase/recombinase phnL 15749 - 15075 - | ATP transporter ATP-binding protein maeB 16020 - 18272 + | malic enzyme TERM 5 18307 - 18344 + F 73 -12 -2.66711 | overlap 18306 GGGCTAAACTGCATG GCTCTACGCGCTGTCA TGGCCC TGGTGGCGCGTGGGGC ATTATGCGTTCTGGC AM025 18446 - 21166 + | hypothetical protein TERM 6 21298 - 21308 + F 86 -8.2 -4.61633 | AGGTTGTAATTATCG CCGC CAT GCGG TTTTTCAAAGTATGT AM026 21386 - 22900 + | putative monovalent cation/H+ antiporter subunit D AM027 23301 - 22915 - | hypothetical protein TERM 7 23028 - 23041 + g 70 -9.5 -3.2396 | opp_overlap 23026 23027 TATATGGCGAAAACT GCCGC TGAG GCGGC TTAGTACTACTGGTT orfX 23882 - 23496 - | ORF X orfY 24188 - 23955 - | ORF Y AM034 27445 - 25004 - | hypothetical protein TERM 8 27837 - 27810 - g 73 -5.6 -4.67353 | GTATGCACTCAAAAA TGGGGATGCTAT AGAC ATAGTATACCCA ATGCAAGGTGGTTAG AM035 27643 - 27852 + | hypothetical protein thiG 27915 - 28709 + | thiazole synthase AM038 29247 - 28807 - | hypothetical protein gltX 29429 - 30754 + | glutamyl-tRNA synthetase TERM 9 31890 - 31879 - g 71 -5.8 -4.32436 | overlap 31884 ATATCACTAGTAAAA GCCA AGGT TGGC CAAGTGATTGGCCCA AM041 31186 - 32391 + | hypothetical protein AM042 32410 - 32967 + | hypothetical protein orfX 33541 - 33143 - | ORF X orfY 33847 - 33614 - | ORF Y rho 38125 - 36761 - | transcription termination factor Rho TERM 10 36946 - 36972 + g 71 -5.8 -4.39166 | opp_overlap 36946 ATTTAGAAATATCAA TCGCAGGGTAGA TTC TCTTGTCTGCGA TTTTCCTGTCTAGGA AM052 38851 - 38234 - | hypothetical protein rpmI 39269 - 39469 + | 50S ribosomal protein L35 TERM 11 39609 - 39585 - gf 73 -6.3 -4.56775 | overlap 39595 AGGGCGCTCTAAAAA CTGCTACAGAG CTG CGCTGCAGCGG CTGGAGAAGGCTTTG rplT 39496 - 39882 + | 50S ribosomal protein L20 pheS 39845 - 40900 + | phenylalanyl tRNA synthetase alpha subunit AM056 40991 - 41749 + | hypothetical protein TERM 12 41903 - 41878 - f 70 -3.3 -4.86033 | overlap 41879 41896 AAATCCCTAGAAAAA GCTCCAAAATT GATG AATCCTGGAGT CCCAAGTCCACGTAT TERM 13 42837 - 42821 - g 74 -2.2 -5.21709 | gap 1, overlap 42822 TGCCACATCAAAAAA GGAGCCA TTGT CGGC-CC ATTTGCCAGGGTTAG glmU 41930 - 43216 + | UDP-N-acetylglucosamine pyrophosphorylase rpsP 43638 - 43369 - | 30S ribosomal protein S16 proP1 43929 - 45215 + | proline/betaine transport protein orfY 47834 - 48067 + | ORF Y orfX 48140 - 48535 + | ORF X fpbA 49429 - 50469 + | iron binding protein FbpA precursor AM070 50470 - 50649 + | hypothetical protein AM071 54888 - 50899 - | hypothetical protein TERM 14 53042 - 53056 + g 71 -5.6 -4.58395 | GCCTCGCTATCACTC GGCAGC TCA GCTACC TTTTTGCCCCCTGGC TERM 15 53302 - 53315 + g 74 -2.3 -5.06816 | opp_overlap 53302 AACATATTCTGAATA TGCCG CCCC CAGCA TTTTTGTTCGCACAT TERM 16 53763 - 53800 + g 71 -7.7 -4.11216 | gap 1, opp_overlap 53775, overlap 53766 GTACTCCAATGTGCC CAACCGGGGAAAGGGTTG TTA CAATCCCT-CCTCGGCTG TTTTCAAGGTGCGCA AM072 55153 - 61272 + | hypothetical protein AM073 61898 - 61443 - | transcriptional regulator NrdR AM074 62431 - 62886 + | hypothetical protein omp14 63055 - 64269 + | outer membrane protein 14 orfX 65242 - 64841 - | ORF X orfX 67571 - 67978 + | ORF X recA 68810 - 69889 + | recombinase A pyrE 69984 - 70586 + | orotate phosphoribosyltransferase thiF 70620 - 71426 + | thiamine biosynthesis protein TERM 17 71767 - 71734 - T 79 -12.7 -3.11999 | gap 1, overlap 71766 ACCAAAGTGACGCAA CATGTGGCAAAGA-CT TTT AGATCTTTACCACATG TGAAAAGCCCACAAT msp4 72630 - 71782 - | major surface protein 4 TERM 18 73079 - 73061 - R 83 -9.6 -4.17023 | TCAAGGACCTGAAAA TCATCGGC GAA ACCGATGA GGATGAAATGGATGT AM092 76326 - 75388 - | hypothetical protein TERM 19 76006 - 75994 - G 83 -5.5 -5.15969 | opp_overlap 75997 75999 TGGCAAGCCAAAAAA CCCCA TGC TGGAG CTTCCGGAACTGAAG AM093 76731 - 76411 - | hypothetical protein AM094 76781 - 76984 + | hypothetical protein TERM 20 77334 - 77314 - T 83 -8.9 -4.35742 | ATGCAATGACCAAAA TGGAGCCCC GCT GCGGCCCCA AAGCTGCGAACGCGC TERM 21 77402 - 77391 - T 82 -7.2 -4.66609 | CAGCCGAGTGAAAAA GCGC TAAC GCGC AGCCCCAAAAAGGAC TERM 22 77433 - 77414 - T 76 -6.4 -4.59773 | gap 1, overlap 77415 GCGCAGCCCCAAAAA GGACGCTAC TGT GCAGCG-CC TCCAACAGCACTGTC trxA 77766 - 77419 - | thioredoxin trbG 78587 - 77775 - | conjugal transfer protein trbG precursor TERM 23 78547 - 78535 - G 79 -9.1 -4.25104 | overlap 78513 TCCTGCTTACCAAAA GCAGC CGA GCTGC ACAACAGCGCTACAG pdhA 79956 - 78838 - | pyruvate dehydrogenase E1 component, alpha subunit precursor TERM 24 79507 - 79478 - GR 73 -3 -5.00616 | gap 1 TGCCCGCCGAAAAAA TTCTTTGCTACAT TAAAC ATGT-GCATAGAA CCACCCTTACCCTTG rrf 80869 - 79928 - | hypothetical protein TERM 25 83217 - 83244 + r 74 -7 -4.34263 | gap 1 CCCGGGCGCCAGCCT GGGTGGAGTCGTC CTT GA-GATACCACCC TTTGTGTTCTTGGCA guaB 85998 - 84517 - | inosine monophosphate dehydrogenase ppnK 86820 - 86056 - | inorganic polyphosphate/ATP-NAD kinase rpmE 87094 - 86873 - | 50S ribosomal protein L31 fabD 87396 - 88415 + | malonyl CoA-acyl carrier protein transacylase tmk 88417 - 89052 + | thymidylate kinase AM112 89107 - 90375 + | hypothetical protein AM113 91186 - 90533 - | hypothetical protein TERM 26 91031 - 91011 - G 77 -9.7 -3.7511 | opp_overlap 91011 TCCGCCACAACAGAA CTCACAGGA ATG TCCTGGGAG TTAATGGAGCCGTCA secB 91268 - 91795 + | preprotein translocase subunit SecB AM116 91749 - 92567 + | hypothetical protein mpp 94131 - 92821 - | mitochondrial processing protease AM118 94178 - 95500 + | hypothetical protein AM119 95806 - 97209 + | hypothetical protein ribA 97923 - 97306 - | riboflavin synthase subunit alpha AM122 97418 - 98149 + | hypothetical protein msp1B-2 100475 - 98205 - | major surface protein 1B-2 msp1bpg2 101902 - 100706 - | major surface protein 1B mfd 105338 - 101880 - | transcription repair coupling factor TERM 27 102972 - 102987 + g 80 -3.2 -5.24129 | overlap 102974 CCCCATGGGTGGGGT CCTGAG AACG CTCAAG TTTTTTATCCCGGAA TERM 28 104156 - 104140 - G 77 -10.1 -3.68988 | GCGGAGTTAATATAA TCCGCGG CCA CCGCGAA TACGTCAGCCTTTTG rnhA 105394 - 105909 + | ribonuclease H TERM 29 108329 - 108312 - g 95 -11.3 -4.57353 | GGTGAGCACAGAAAA CGCAGGA AACT TCCTGCG ATCCATCGACGTTTT AM127 105919 - 108918 + | hypothetical protein pyrH 109082 - 109843 + | uridylate kinase frr 109852 - 110403 + | ribosome recycling factor uppS 110416 - 111114 + | putative undecaprenyl diphosphate synthase cdsA 111068 - 111952 + | phosphatidate cytidylyltransferase msp1Bpg3 114160 - 112247 - | major surface protein 1B AM136 117225 - 114304 - | hypothetical protein TERM 30 116149 - 116169 + g 72 -4 -4.8543 | opp_overlap 116137, overlap 116137 AACCCCGCGCAACAG TGGGACAA TCTCC TTGTGCCA TTTTTGTGCGGCTTC TERM 31 117310 - 117283 - R 73 -5.1 -4.72272 | GTGTTCTATTAAAAA GTCAATAAATA TTAACT TATTTATTAAC GTACACGAGAAGTGC purC 118097 - 117369 - | phosphoribosoylaminoimidazole-succinocarboxamide synthase hisS 118215 - 119507 + | histidyl-tRNA synthetase AM139 120272 - 119517 - | hypothetical protein TERM 32 119862 - 119836 - G 71 -6.4 -4.36914 | opp_overlap 119848 TCCGGGTTGATAAAA TGCACCGCAAGC GCT GCACGCGCCGCA AGCGTGGAAGCTTCT TERM 33 120420 - 120402 - H 71 -6.7 -4.1899 | gap 1, opp_overlap 120417, overlap 120404 GTATCTCATCGAAAA CACGCTCC CCTC GGAGCG-G ATACAGCCTTGTGAC TERM 34 120419 - 120404 - H 80 -10.4 -3.69483 | opp_overlap 120417, overlap 120402 ATCTCATCGAAAACA CGCTCC CCTC GGAGCG GATACAGCCTTGTGA TERM 35 121068 - 121103 + G 71 -5.2 -4.58085 | overlap 121070 AAGTGGGCTTGTTGA TACCCCGCGTGTCAGT CACT ACAGGCTAGCGGGGCA TTTGTTTCTCACTAT TERM 36 121376 - 121386 + G 76 -6.8 -4.57073 | TTCTGCACGATGTTA CTGC AGT GCAG TTTTTGCACAGACTA coxW 120631 - 121656 + | cytochrome C oxidase assembly protein panB 121691 - 122524 + | 3-methyl-2-oxobutanoate hydroxymethyltransferase ccmA 123292 - 122666 - | cytochrome c biogenesis protein CcmA murA 124611 - 123325 - | UDP-N-acetylglucosamine 1-carboxyvinyltransferase dcd 125170 - 124613 - | deoxycytidine triphosphate deaminase AM148 126114 - 125269 - | hypothetical protein cspA 126498 - 126776 + | cold shock protein ntrY 126818 - 128905 + | nitrogen regulation protein rnd 128874 - 130079 + | ribonuclease D TERM 37 130079 - 130096 + T 72 -4.1 -4.81852 | gap 1, overlap 130082 TAGCGGTGAATCCTA GATGCGGT CCT GCCGC-TC TTTTGTTGGTTATGC ligA 132183 - 130162 - | DNA ligase grxC2 132524 - 132192 - | glutaredoxin-like protein GRLA AM154 132750 - 132514 - | hypothetical protein AM156 133445 - 132894 - | hypothetical protein TERM 38 133119 - 133136 + gr 72 -4.1 -4.89009 | overlap 133120 GTCAAGATATGCCAC GCCATAC ACAC GTATGGG TTTTTCATTGGCTAT TERM 39 133149 - 133162 + gr 71 -5.3 -4.4891 | GGGTTTTTCATTGGC TATGG ACAT CCATA TTTTGTGCTCCTCAA radA 134763 - 133393 - | DNA repair protein RadA TERM 40 133954 - 133914 - GH 80 -2.6 -5.40474 | overlap 133917 ACTGGCCCAAAAAAA GCATGGAT-GGATCTTGCAC AGG GAGCA-GACCCGATCCAGAC ATTTCAAAAACTCCC TERM 41 136075 - 136061 - g 76 -2.7 -5.1675 | opp_overlap 136073 CCACTGAGGAAAAAA CCGGC CATCC GTCGG GGAGCAGGCTGCTAT AM159 135010 - 137652 + | hypothetical protein AM160 137659 - 138246 + | hypothetical protein rpsF 138257 - 138640 + | 30S ribosomal protein S6 rpsR 138716 - 138943 + | 30S ribosomal protein S18 rplI 138963 - 139625 + | 50S ribosomal protein L9 TERM 42 139898 - 139909 + G 70 -4.4 -4.71061 | ACCTAGCCGTTGAGC GTCT CTGC AGAC TTTTTGGGTGTAAAT glyA 139651 - 140943 + | glycine/serine hydroxymethyltransferase AM166 141074 - 141415 + | hypothetical protein msbA2 141396 - 143144 + | ABC efflux transporter sdhA 143415 - 145214 + | succinate dehydrogenase flavoprotein subunit sdhB 145239 - 146027 + | succinate dehydrogenase iron-sulfur subunit TERM 43 146550 - 146525 - g 79 -13.3 -2.77999 | overlap 146529 CATGTATGAAGATTA CGAAGCCCTGC TGGA GCAGGGCTTAG CGCGGGAGCTTGCCA TERM 44 146546 - 146529 - g 81 -12.7 -3.28637 | overlap 146525 TATGAAGATTACGAA GCCCTGC TGGA GCAGGGC TTAGCGCGGGAGCTT thyX 146028 - 146903 + | FAD-dependent thymidylate synthase bcr2 147040 - 148221 + | bicyclomycin resistance protein ruvB 149358 - 148363 - | Holliday junction DNA helicase B ruvA 149927 - 149355 - | holliday junction DNA helicase ccmc 150676 - 149924 - | heme exporter protein C TERM 45 150375 - 150360 - G 71 -6.8 -4.16279 | CACACCATGGTAAAA CACCCG CCCA CAGGTG CCATCGCCCTGGACA TERM 46 151126 - 151136 + G 73 -5.4 -4.72272 | AGGGTGAGGTTAACG GTAG GGA CTAC TTTTTCCTCAGCGAA TERM 47 151143 - 151157 + G 76 -5.6 -4.79223 | AGGGACTACTTTTTC CTCAGC GAA GCGGAG TTTTTGCTGATGTGC gmk 150861 - 151595 + | guanylate kinase AM178 151721 - 152833 + | hypothetical protein folD 152987 - 153886 + | methylenetetrahydrofolate dehydrogenase msp1B-1 154357 - 156576 + | major surface protein 1B-1 TERM 48 156983 - 156973 - f 74 -8.2 -4.08216 | TCACTTGGGTGAAAA GCCG TAC CGGC GGGGCTGCAGCTTAG AM185 157060 - 159456 + | hypothetical protein msp1Bpg1 159944 - 159495 - | major surface protein 1B AM189 160817 - 160185 - | hypothetical protein cycM 161598 - 161059 - | cytochrome C nuoL2 163518 - 161998 - | NADH dehydrogenase I chain L TERM 49 162310 - 162286 - G 71 -7.2 -4.08692 | gap 1 GAACTTTCCCCAAAA GGTTGAGGCTG GCGG CA-CCCCAACC ATCGCCAAAGCCCCG ppdK 166542 - 163888 - | pyruvate phosphate dikinase TERM 50 164549 - 164560 + g 78 -5.8 -4.83169 | CTGCAACCTCTGTGA CCCA GCAT TGGG TTTTTCTCAGACAAT AM197 167347 - 166838 - | hypothetical protein AM198 167973 - 167350 - | hypothetical protein aspS 169142 - 168165 - | asparaginyl-tRNA synthetase TERM 51 168940 - 168922 - GR 91 -5.2 -5.52384 | opp_overlap 168930 TTGTCATCAAAAAAA CTCCTCGG CTT CCCAGAAG TGTTGGGAGCAGGAA aspS 169944 - 169054 - | asparaginyl-tRNA synthetase AM202 170363 - 170950 + | hypothetical protein TERM 52 171128 - 171143 + G 74 -6.8 -4.32607 | CCGAGGCGTTTTCTG TCCGCG TGGG TGCGGA TTTGTTACATTTTCA gshB 170965 - 171891 + | glutathione synthetase ddlB 172027 - 173031 + | D-alanine--D-alanine ligase TERM 53 173536 - 173556 + G 76 -7.5 -4.37092 | overlap 173540 GTCAATTTATGGCGA TGAGGCCCT GGA AGGGCTACA TTTTGTGCGCGAAGT ftsQ 173024 - 173797 + | cell division protein ntrX 174038 - 175438 + | nitrogen assimilation regulatory protein orfX 175825 - 176214 + | ORF X TERM 54 177212 - 177241 + T 73 -11.6 -2.87647 | gap 1, opp_overlap 177211 177208, overlap 177214 177218 177221 TCTTACCTAAAGCAG CAGCAAGACGGTC TACCT GACC-TCTTGCTG TATCATATGCTAACT gor 179011 - 177599 - | glutathione reductase TERM 55 178529 - 178542 + g 74 -2.3 -5.14563 | overlap 178525 178530 TAGCATTGCGTCTCT GGCTG TCCA CAGCA TTTTTTCGTCCAAGC TERM 56 179197 - 179166 - H 76 -4.8 -4.96848 | TTTCTGATAGAAAAA TTAATATTTTAA TGCTCTTG TTAAAATATTAA GGATTATTTAAGATG AM216 179210 - 181738 + | hypothetical protein TERM 57 181763 - 181803 + F 74 -4 -4.98522 | opp_overlap 181768, overlap 181768 181771 ACGTTTTTTAGCCTA CACTA-CCGGCCGGGCAGGT CTA ATCTGC-CGGCTGCTTAGAG TTTTTGTGTCCGGTT AM217 181807 - 183273 + | hypothetical protein TERM 58 183464 - 183476 + G 70 -4.8 -4.60797 | CGAACATGAGACTCA GCTG AACAA CAGC TTTTCTGTCTGGCGG AM218 183273 - 183896 + | hypothetical protein AM219 183893 - 184429 + | hypothetical protein TERM 59 185422 - 185407 - g 91 -6.8 -5.10933 | opp_overlap 185413 TTACGTAAAAGAAAA GCTCCC GGGC GGGAAC GTCCTTGTTGCCTAT AM220 184598 - 185461 + | hypothetical protein glnA 186283 - 185456 - | glutamine synthetase TERM 60 185996 - 186015 + g 80 -2 -5.40072 | opp_overlap 185983, overlap 185997 185998 ATTGCCGCCAAAAGA TTCGGCAG TGCG CTGCAGGG TTTTTTTCACGGAAA pstC 187388 - 186261 - | ABC-type phosphate transport system, permease component TERM 61 187153 - 187137 - G 85 -7.3 -4.86033 | overlap 187139 AAAGGTGGATAAAAA CATTGCG CAC CGCAATA TGGCAAACTTTTTAT TERM 62 187151 - 187139 - G 71 -7.7 -4.04397 | overlap 187137 AGGTGGATAAAAACA TTGCG CAC CGCAA TATGGCAAACTTTTT TERM 63 189914 - 189936 + G 77 -9.8 -3.68936 | overlap 189917 TGCGATAGCTACAGC TGTGGACGGC AAG GCTGTCCTCA TTATTGGAGTTGGTG alaS 187473 - 190121 + | alanyl-tRNA synthetase sucD 191712 - 190828 - | succinyl-CoA ligase chain A sucC 192887 - 191721 - | succinyl-CoA synthetase beta chain rpsU 193253 - 192990 - | 30S ribosomal protein S21 pstS 194377 - 193361 - | phosphate ABC transporter, periplasmic phosphate-binding protein msp5 195069 - 194437 - | major surface protein 5 TERM 64 195244 - 195224 - R 91 -7.5 -5.10029 | AGTAACCCGAAAAAA GCGTGTAGC CAC ACAACACGC AGTGAGGCTAACGGT AM237 196268 - 195252 - | hypothetical protein cybB 196813 - 196271 - | cytochrome b561 TERM 65 197312 - 197334 + G 82 -12.8 -3.41581 | opp_overlap 197324, overlap 197324 GTCGGAGCCGTGGTG GCGCTCATAG GAG TTATGAGCGC TTGGTTCATAACTTA AM240 197126 - 198754 + | hypothetical protein aprE 200487 - 198949 - | alkaline protease secretion protein AM242 201231 - 200575 - | hypothetical protein TERM 66 200607 - 200632 + g 74 -2.5 -5.1925 | gap 1, opp_overlap 200607 CAAAAACCTTCAACA CTCTCGGCAGCA TGT TTCTGGCG-GAG TTTTTTAACTTCTGC murD 201697 - 203013 + | UDP-N-acetylmuramoylalanine--D-glutamate ligase tolB 204363 - 203038 - | translocation protein TolB AM245 205998 - 204370 - | hypothetical protein TERM 67 205138 - 205156 + g 73 -8.8 -3.69216 | overlap 205136 GTACAGCACGTTTTT GGCTGGTA TAC TCCCAGCC TGTTTTGCATCGAGA TERM 68 205336 - 205317 - G 76 -6.4 -4.65895 | gap 1, opp_overlap 205317 TGTTTGAGGCAAAAA GCGCAACGG CCA CC-CTGCGC TTGCTCGCTTTCACT TERM 69 205642 - 205613 - G 73 -5.7 -4.56093 | gap 1 AACTCAAGCACAAAA GGCCCCAGC-TCCA ACT TAGATGCTGGATCC ACCTCTTCAATTGGG TERM 70 206309 - 206319 + G 79 -8.2 -4.29829 | overlap 206303 CTCCACCTTTTGCAG GCCG CTG CGGC TTTGTTACTGCTTAT AM247 206240 - 206812 + | hypothetical protein AM248 206845 - 208338 + | hypothetical protein rpsL 208523 - 208897 + | 30S ribosomal protein S12 rpsG 208915 - 209397 + | 30S ribosomal protein S7 TERM 71 210120 - 210136 + G 71 -6.5 -4.24397 | opp_overlap 210118 AGCCATGAATCTATA TCTCGAC GGT GGCGAGA TTTCTGTTCCGTTAT TERM 72 210234 - 210260 + G 91 -6.5 -5.07567 | overlap 210230 CAAGAATAAGGGTGT TCAGCCGCTGC TGGAC GCTGTGGTTGA TTTTTTACCATCTCC fusA 209431 - 211503 + | elongation factor G tuf 211515 - 212696 + | elongation factor Tu secE 212796 - 213008 + | preprotein translocase subunit SecE nusG 212992 - 213558 + | transcription antitermination protein rplK 213562 - 214005 + | 50S ribosomal protein L11 rplA 214002 - 214676 + | 50S ribosomal protein L1 rplJ 214712 - 215203 + | 50S ribosomal protein L10 rplL 215328 - 215732 + | 50S ribosomal protein L7/L12 TERM 73 217327 - 217358 + G 70 -4.4 -4.63527 | overlap 217328 CCTGTGATTTCGTCA ATCCTAAGGTGCTG GCTA CAGTACTTAAGGAC TTTTTCAGCTCATCG rpoB 215769 - 219917 + | DNA-directed RNA polymerase subunit beta TERM 74 220918 - 220906 - g 70 -3.3 -4.83615 | CATGGGCTACAAAAA GTCTC TTA GTGAC ATGCTTAAGGGAAAG rpoC 219929 - 224176 + | DNA-directed RNA polymerase beta' chain rnhB 225192 - 224173 - | ribonuclease HII AM265 225409 - 228828 + | hypothetical protein AM266 229526 - 229023 - | hypothetical protein AM268 230915 - 229773 - | hypothetical protein TERM 75 231004 - 231022 + H 80 -11.7 -3.41051 | opp_overlap 230996 230999 ACCAAACCCACCCAT GCACCGC AATGC GCGGTGC TTATGCTACCAGTAC AM270 231322 - 231849 + | hypothetical protein TERM 76 231926 - 231947 + T 74 -2.2 -5.19261 | gap 1, overlap 231925 CACAAACATGACAGG CGCGGCGGC CCTCA GCC-TTGCG TTTTTTCGTAAATTT AM271 232710 - 231937 - | pantothenate kinase TERM 77 232333 - 232349 + g 71 -5.1 -4.56597 | opp_overlap 232323, overlap 232334 AATTACCAACAGGTC GCTTGTG GGC CACAAGG TTTTTGCAGCGACCA pyrD 233886 - 232717 - | dihydroorotate dehydrogenase 2 AM275 234047 - 234637 + | hypothetical protein AM276 234769 - 235521 + | hypothetical protein AM279 235885 - 236751 + | hypothetical protein TERM 78 237028 - 237014 - g 77 -9.2 -4.11216 | TTGCGATGTTCAAAA CAGGCC ATC GGCCCG GGTCGTACTGCTCAA pdxH 236889 - 237488 + | pyridoxamine 5-phosphate oxidase murE 238911 - 237493 - | UDP-N-acetylmuramoylalanyl-D-glutamate 2,6-diaminopimelate ligase AM283 238895 - 239110 + | hypothetical protein metC 240358 - 239132 - | cystathionine beta-lyase bolA 240785 - 240312 - | bolA like protein AM286 240922 - 241857 + | hypothetical protein TERM 79 242849 - 242861 + G 84 -4.8 -5.28176 | overlap 242844 CATCCCCCTGGTCGC CACG AACGA CGTG TTTTTTGTACGTAGG TERM 80 245434 - 245416 - g 80 -4.6 -5.1101 | CCATGACTCAAAAAA TGAAAAAC ATA GTTATTCA CTTCAGTCAAGGTCA dnaE 242268 - 245651 + | DNA polymerase III alpha subunit rrs 245891 - 247279 + | 3-phosphoshikimate 1-carboxyvinyltransferase TERM 81 247547 - 247574 + TF 79 -12.8 -3.14132 | opp_overlap 247547 TGCAAGTCGAACGGA CCGTATACGCAG CTTG CTGCGTGTATGG TTAGTGGCAGACGGG TERM 82 248065 - 248049 - Tf 72 -10.1 -3.43919 | overlap 248047 GTTAAAGGTGAAATA CCAGGGC TTA ACCCTGG GGCTGCTTTTAATAC TERM 83 249150 - 249160 + GT 70 -4.6 -4.64361 | CTCCATCACTCATAG GGCT TCG GGCC TTTTCCTCTTTTTTG AM291 249686 - 249312 - | hypothetical protein TERM 84 249401 - 249429 + Gg 91 -8.9 -4.88687 | gap 1, overlap 249396 249395 GCGCTTTTGTGCTGC TGCTGACGGCCG CGTTCT CGGTCGTC-GCA TTCTTTTTTGTTTGG sdhC 249067 - 249450 + | succinate dehydrogenase cytochrome b556 subunit sdhD 249441 - 249791 + | succinate dehyrdrogenase subunit D pep1 249942 - 251312 + | hypothetical protein thiD 252638 - 251856 - | phosphomethylpyrimidine kinase AM296 253311 - 252646 - | hypothetical protein perM 254664 - 253312 - | permease perM-like AM299 255290 - 254937 - | hypothetical protein rpsD 255537 - 256073 + | 30S ribosomal protein S4 TERM 85 256067 - 256083 + T 76 -6.5 -4.45083 | overlap 256068 CGTTGAGTTCTTTTC CGGGTAG TGG CTACCCC TTTTGTCCATGTGGC TERM 86 256068 - 256082 + T 70 -10 -3.26568 | overlap 256067 GTTGAGTTCTTTTCC GGGTAG TGG CTACCC CTTTTGTCCATGTGG AM302 257638 - 256490 - | hypothetical protein AM303 258471 - 257698 - | hypothetical protein pgpA 259010 - 258486 - | phosphatidylglycerophosphatase A TERM 87 258873 - 258861 - G 70 -3.3 -4.8269 | TACAACCACCAAAAA GGCAC CAC ACGCC GCACTAGAAACTATC TERM 88 258922 - 258900 - G 74 -2 -5.17576 | gap 1, overlap 258903 TATCAAGGGAAAAAA CACGAGAGC TGCTGC GCTCCC-TG CAGTGCCCGGAGCCA AM306 259331 - 259077 - | hypothetical protein TERM 89 259294 - 259262 - G 93 -9 -4.95806 | AAACCACCACAAAAA CCCACCGAGAGGCG AGAGA CCCCTCACGCTGGG CCACGCGCCATGCAA TERM 90 261081 - 261069 - g 70 -4.8 -4.68209 | AGGCCAAGAAAGAAA GGCA GAATG TGCC CGCCGGAGATCTAAA tig 259718 - 261118 + | trigger factor clpP 261123 - 261770 + | ATP-dependent Clp protease proteolytic subunit clpX 261780 - 262997 + | ATP-dependent protease ATP-binding subunit TERM 91 263323 - 263338 + G 74 -4 -5.00616 | overlap 263323 CCAAGGTTCTGAATT TCATCG ATGG TGATGA TTTTTTGAGCGCGGA TERM 92 263474 - 263464 - g 83 -3.2 -5.52986 | AGCTCAGCAAAAAAA CCCA GTC TGAG GTTGTTGCCTCCGCA lon 263016 - 265442 + | ATP-dependent protease LA TERM 93 265620 - 265640 + F 70 -8.2 -3.78436 | GGATCTTTGTGTTGT GGGTCCGG GGATG CCGGAGCC TTGTTCGTGTAGGTT fmt 265965 - 266870 + | methionyl-tRNA formyltransferase AM315 267028 - 267861 + | hypothetical protein AM316 268029 - 268904 + | hypothetical protein thiE 269317 - 270339 + | thiamin monophosphate synthase AM320 271899 - 270586 - | hypothetical protein TERM 94 271367 - 271377 + g 74 -4 -4.98255 | ATGGCTTCCGCCGCC GAAA CTA TTTC TTTTTGTCCTTGCAC TERM 95 271867 - 271857 - G 70 -4.6 -4.70169 | CTACAGGGAACAAAA CCCA CTC CGGG CCGACTATACACAAT AM321 272040 - 272318 + | hypothetical protein ftsK 272293 - 274566 + | cell division protein AM324 275893 - 274841 - | hypothetical protein TERM 96 274976 - 274991 + g 82 -7.5 -4.60797 | CACAAGTGAGGACTG GGGCG ATTCGG CGCCC TTTTCTGTGTACACC TERM 97 275180 - 275195 + g 80 -3.2 -5.26316 | CAGGAATAAGCCAGA CTGGAA GCAG TACCAG TTTTTTCTGCGCTGC TERM 98 275250 - 275261 + g 70 -4.4 -4.60317 | GAATCTCCCCTGCGG GCTA CATC TAGC TTTTCCTTCTTGTAT TERM 99 275585 - 275558 - G 70 -10.6 -2.96546 | overlap 275557 GAGAATACAGGAAAG CGCGGCGTATAA TGCA TAATACGCCACG ACGACTTTGGCTTTG TERM 100 275754 - 275778 + g 73 -5.6 -4.71708 | AACCGCGACGCTCTG CCTATACGGC CCCTT GCCGAGTGGG TTTTACTTTCTTCTT argD 277298 - 276120 - | bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein barA 277480 - 278886 + | histidine kinase sensor protein AM328 279751 - 278900 - | hypothetical protein TERM 101 279428 - 279448 + gT 75 -8.9 -3.86816 | overlap 279429 CTCCCTTTCCATGGC CTTCCTCCC CGG GGGCGGAGG TATTCTTTTTATCGG TERM 102 279429 - 279450 + gT 71 -5.1 -4.53475 | gap 1, overlap 279428 TCCCTTTCCATGGCC TTCCTCC-CC GGG GGCGGAGGTA TTCTTTTTATCGGCT tolR 280193 - 279717 - | TolR protein tolQ 280866 - 280174 - | TolQ protein TERM 103 280984 - 281000 + H 72 -3.7 -4.84918 | overlap 280980 CGTTGTTTGCTTTCC CTAGTAC AGG GTAGTAG TTTTCTCTTTGTGCG mutL 281043 - 282227 + | DNA mismatch repair protein TERM 104 282254 - 282264 + F 87 -4.6 -5.42198 | opp_overlap 282244 AAAACCCCCCACGCG CGGC GGA GCTG TTTTCTTTTTTGGGA mutL 282274 - 282939 + | DNA mismatch repair protein smf 284086 - 282953 - | DNA processing protein, chain A TERM 105 283460 - 283445 - G 73 -5.4 -4.65895 | gap 1, overlap 283447 GCGTTGAGGGAAAAA GCTCGCC TTC GGC-AGC GACGAAAATGGCAGC trmU 285728 - 284565 - | tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase TERM 106 285459 - 285477 + g 73 -8.8 -3.70863 | overlap 285465 GTAATGCGGGAACCC GAGCGTTG ATG CAACGCGC TTTGCGTCATATATA AM336 286938 - 285916 - | hypothetical protein fabB 288522 - 287239 - | 3-oxoacyl-(acyl-carrier-protein) synthase II acpP 288974 - 288627 - | acyl carrier protein rpmG 289743 - 289573 - | 50S ribosomal protein L33 AM342 289888 - 290631 + | hypothetical protein AM343 290619 - 291137 + | hypothetical protein TERM 107 291138 - 291150 + F 91 -9.1 -4.77567 | opp_overlap 291138 291137 291135 GCCAAAGGCAAATAG CCGCA GGG TGCGG TTTTATTGTCAAACT AM345 291311 - 291622 + | hypothetical protein AM346 292131 - 292970 + | hypothetical protein TERM 108 293019 - 293040 + T 76 -12.9 -2.67188 | overlap 293019 CTAACCTACCTTTGT CCGCCCCCC GGCG GGGGGGGGG GTTGTAGTGCTCTCG TERM 109 293019 - 293041 + T 80 -11.9 -3.45849 | overlap 293019 CTAACCTACCTTTGT CCGCCCCCC GGCGG GGGGGGGGG TTGTAGTGCTCTCGG TERM 110 293066 - 293118 + T 77 -11.3 -3.40403 | gap 3, overlap 293062 293092 293096 TCTCGGGCTGAGGCC CCCGCTTGAGCCGCGGAGGCCTGTTG CCGG CGGC-GGCCCCCGCGGCT--GGTGGG TTGTGGTGCGCCGCG TERM 111 293092 - 293114 + T 76 -12.6 -2.61548 | overlap 293066 293096 CGCGGAGGCCTGTTG CCGGCGGCGG CCC CCGCGGCTGG TGGGTTGTGGTGCGC AM347 296737 - 293135 - | hypothetical protein AM348 296823 - 297086 + | hypothetical protein coq7 297076 - 297588 + | ubiquinone biosynthesis protein TERM 112 298029 - 298046 + G 70 -3.4 -4.75776 | overlap 298031 GCTTCCCAGGCATTT TACCTG GGGCTA CAGGTG TTTTTGGGTTGGATT TERM 113 298120 - 298100 - g 74 -9.7 -3.55084 | overlap 298098 298101 TTGGAAGAGGAAATA TTGCGGACT GCA AGTCCGCAG GCCGTGGTAGGGGAT TERM 114 298119 - 298101 - g 79 -13.2 -2.72568 | overlap 298100 298098 TGGAAGAGGAAATAT TGCGGACT GCA AGTCCGCA GGCCGTGGTAGGGGA AM351 297645 - 298130 + | hypothetical protein TERM 115 298201 - 298224 + T 77 -8.8 -4.08692 | opp_overlap 298184, overlap 298202 CTACGCTGGCCGCGC TCTCCCGCAC CAGT GTGTGGGGGG TTTTAACCAAAATTG AM354 300946 - 298247 - | hypothetical protein TERM 116 298494 - 298504 + g 76 -3.2 -5.20783 | AATTTTGGGAAGAAA GAGG TGT TCTC TTTTTGTGTTTCAGT TERM 117 298708 - 298729 + g 91 -4.3 -5.58209 | overlap 298709 AGCGCGATTGTGGCT TCTCTTCCG AGTG CGGGAGCGG TTTTTTTACGTTTGA TERM 118 300031 - 299996 - G 86 -6.1 -5.10064 | opp_overlap 299997, overlap 299998 TTCAATAGACAAAAA CACGCGTTTAAGGCA TTGCTT TGCCTTCCACGCGCA TTCGTTAGAGCTGTT TERM 119 300029 - 299998 - G 79 -8.7 -4.16832 | opp_overlap 299997, overlap 299996 CAATAGACAAAAACA CGCGTTTAAGGCA TTGCTT TGCCTTCCACGCG CATTCGTTAGAGCTG TERM 120 301042 - 301060 + r 73 -8.8 -3.76226 | opp_overlap 301025, overlap 301045 TATCCCGGCGGCGTA CGTTCCCG CTC CGGGAGTG TTATGTTGTCACATT AM356 305679 - 301069 - | hypothetical protein TERM 121 302375 - 302390 + g 76 -6.1 -4.62783 | opp_overlap 302354 302373 TTGATGTTCAAAGGC GCGTC AGTAAC GACGC TTTTTGCGCTGAATG AM357 305917 - 305687 - | hypothetical protein TERM 122 305983 - 305996 + r 72 -3.8 -4.86226 | opp_overlap 305983 TTCGGGAGCGACATA TGCC GATGTA GGCA TTATTTTTTTGATGT AM359 310316 - 306198 - | hypothetical protein TERM 123 308939 - 308928 - G 71 -5.8 -4.29073 | CAACAATGCAACAAA GCTG GCGT CAGC GCGCTCTAAACTTTC AM360 310893 - 310609 - | hypothetical protein AM366 319747 - 311228 - | hypothetical protein TERM 124 312012 - 312027 + g 76 -3.2 -5.0916 | overlap 312004 312014 TCCTGCTGTAGATCT GAGAAG TCTA CTTCGC TTTTTATGTTACCCA TERM 125 313114 - 313130 + g 72 -8 -3.93695 | overlap 313106 AGACAGCGTGCACAT TGCCCA TATTT TGGGCA TTTCTGGCTGCTGCG TERM 126 313737 - 313747 + g 71 -6.8 -4.13037 | TGAGGCGGATGTTGC CGTG ACA CACG TTCTTTGGTGTTTAT TERM 127 314617 - 314628 + g 74 -4.4 -4.85822 | ATTTTATATTGACCG TCAG ATTG CTGA TTTTATATTTATCCT TERM 128 315630 - 315641 + g 76 -5.8 -4.67353 | overlap 315620 AATGTTACACTTGGT GTGC TTAT GCAC TTTTTCAGTGCATCC TERM 129 319675 - 319685 + g 84 -4.6 -5.24531 | overlap 319671 CCATTCGCAAGCGGA GCTG CTT CGGC TTTTTTCTGAACAAT AM368 323076 - 320035 - | hypothetical protein TERM 130 320392 - 320410 + g 70 -2.5 -4.9448 | gap 1, overlap 320392 320394 GGCTGCGCAGATTCC G-ACCAAA ATTT TTTGGTGC TTTTCTTTGGTGGGT TERM 131 320573 - 320593 + g 79 -8.3 -4.3767 | TGTTCTGGATCAGTC CCCAACACT GAA AGTTTTGGG TTTGTTATCCTGTAC uvrD 325534 - 323519 - | DNA helicase II AM371 325806 - 327449 + | hypothetical protein TERM 132 328025 - 328041 + F 82 -7.3 -4.65747 | GTACTTGGACAGTTA CCAAGTG AAA TACTTGG TTTTGTTGAGAATTA TERM 133 331211 - 331229 + G 71 -6 -4.41348 | overlap 331219 TCAGAGTTGTCGGGC GTAGCACT CAG GGTGTTAC TTTGTTTAAGACCGA gyrA 328606 - 331332 + | DNA gyrase subunit A nth 331332 - 331964 + | endonuclease III AM375 332283 - 332888 + | hypothetical protein TERM 134 333149 - 333137 - g 73 -9.1 -3.72576 | TTTGCTCTGACCAAA GCCTC ATG GAGGC GGGAGAAGAGCTGAG TERM 135 333892 - 333906 + G 71 -7.1 -4.17556 | AACGTGCAGGTTATT CCGCA GTATA TGCGG TTTCTTAGGGGTGTG htpG 332974 - 334890 + | heat shock protein 90 AM378 335136 - 335516 + | hypothetical protein AM380 335631 - 336011 + | hypothetical protein AM382 337396 - 336686 - | hypothetical protein purB 339428 - 338112 - | adenylosuccinate lyase TERM 136 338592 - 338604 + g 100 -3.3 -5.93809 | opp_overlap 338587, overlap 338593 GCCAGTCAAATTCTC ACCCA GAA TGGGA TTTTTTTTGTGAGGC TERM 137 338593 - 338603 + g 71 -6.8 -4.15201 | opp_overlap 338587, overlap 338592 CCAGTCAAATTCTCA CCCA GAA TGGG ATTTTTTTTGTGAGG TERM 138 338622 - 338633 + g 78 -5.8 -4.83169 | TTTTTTGTGAGGCAT GGCA GAGC TGCC TTTTTGTCCGGACGT TERM 139 339907 - 339927 + H 74 -3.9 -5.0133 | overlap 339908 339910 GGTCTGTCTGCCTGG TTGCACGGT GTG GCCGTGTGG TTTTTTGCGGGAGTA uvrC 340263 - 342104 + | excinuclease ABC subunit C AM387 346690 - 342230 - | hypothetical protein TERM 140 342673 - 342687 + g 74 -4.2 -4.78107 | overlap 342669 CACCATATTCTGCTT CCGC GGCAGGG GCGG TTTTTGGTCGTGCTG TERM 141 344021 - 344036 + g 74 -4 -4.96762 | overlap 344022 CCTAAAACTCTCTAC TGACTT CTTC AAGTCG TTTTTCTGCTGTCTG birA 347878 - 347150 - | biotin-(acetyl-CoA carboxylase) gst 348555 - 347887 - | glutathione S-transferase TERM 142 348625 - 348594 - R 76 -12.4 -2.93348 | gap 1, opp_overlap 348599, overlap 348589 348599 TGCATCAATACCACA CTCAAGCCAGAAGCA CAA CGCC-CTGGCTTGAG TACTGAGCCAACTTA AM391 349180 - 348638 - | hypothetical protein TERM 143 349935 - 349902 - g 100 -6.5 -5.38326 | opp_overlap 349908 GCAAGGAAAGAAAAA CCCAGCGCGCGCTAC ACAT GCTGCGCTTGCTAGG TATGGATAGCCACAG AM392 349511 - 350587 + | hypothetical protein recR 350796 - 351437 + | recombination protein AM395 351706 - 351434 - | hypothetical protein znuA 352710 - 351826 - | high-affinity zinc uptake system protein znuC 352690 - 353427 + | zinc uptake system ATP-binding protein TERM 144 354270 - 354252 - g 70 -10.4 -2.89683 | opp_overlap 354250 354246, overlap 354256 ACCTCATGGTAGACA GCAACAAT CGG ATTGTTGC GGTGGATTTCGGCAT TERM 145 354535 - 354548 + G 70 -4.5 -4.63218 | GTTTAACATGAAAGT GCAGC CACA GTTGC TTTTGTTGCAGAAAA TERM 146 354805 - 354817 + G 74 -4.7 -4.8269 | overlap 354787 GCAGACCACGCAACT CGGCG CTG CCCCG TTTTTGATGCTTGTC ubiB 353420 - 354871 + | ubiquinone biosynthesis protein TERM 147 355328 - 355338 + G 72 -8.2 -3.84266 | opp_overlap 355328 355327 CGGGCTTGCCCAAAT GGCC CAC GGCC TTTCGTATGCGCTGT TERM 148 355751 - 355737 - g 84 -4.2 -5.31275 | opp_overlap 355737 355748 TTGCAGGATAAAAAA CGCG TCCTTTT CGCG TTTTGCGTATTTCAA AM400 354909 - 356114 + | hypothetical protein AM401 357644 - 356277 - | hypothetical protein AM402 360423 - 357781 - | hypothetical protein TERM 149 359930 - 359948 + g 76 -11 -3.18582 | CGGTATGCGGGGGTG TGTTCCCC TGC GGGGGACA TTAGTGGATCGGGTG AM404 361549 - 360719 - | hypothetical protein TERM 150 361733 - 361752 + G 78 -3.6 -5.14163 | gap 1, overlap 361735 TTAGAGTGGTCGCGA TTCTC-CAC ACT GTGCGAGGA TTTTTGTTGCTGCGT kgd 361688 - 364480 + | alpha-ketoglutarate decarboxylase TERM 151 365040 - 365006 - T 95 -15.1 -3.73224 | opp_overlap 365005 TTACCGCGCACTAAA TGCACAATGGGGCGT GATGA ACGCCCCACCGTACA GGTTGTCGAGTTTTT AM406 366205 - 365054 - | hypothetical protein TERM 152 366087 - 366107 + g 71 -6.1 -4.30576 | ATCTCCTCTATATGT CTGACTTTC AAG GGGAGTCGG TTTTCCTCATGAGGG dapA 367327 - 366422 - | dihydrodipicolinate synthase TERM 153 367508 - 367529 + r 85 -7.3 -4.87665 | gap 1 ACGGTGAGCTAAGTT CCCTGAATGG CTA CCGT-CAGGG TTTTTGTGCCTCAGG pkcI 367895 - 367524 - | protein kinase C inhibitor 1 AM410 369142 - 367892 - | hypothetical protein TERM 154 368080 - 368102 + g 73 -3.2 -5.02074 | opp_overlap 368085 368088, overlap 368085 CCTTGCTGATATCCT GAGAAGCAGC CGC GCCGCTGCAC TTTTTTAGGAACTCA TERM 155 369066 - 369091 + g 79 -9 -4.1673 | overlap 369090 GTAGTGGCGAAATCG GCGGCAGTTG CGGCAC CAACTCCCGC TTTCTTGAGAGCTTC TERM 156 371845 - 371860 + G 84 -4.7 -5.24129 | GTTTCCCAAAAATGT TCTGG AGAGAG CCAGA TTTTTTATGGGGGAG mutS 369479 - 371938 + | DNA mismatch repair protein AM413 371919 - 372203 + | hypothetical protein TERM 157 372972 - 372983 + G 74 -4.4 -4.86621 | ATGCACGAGTGGGGG TGGA GGAT TCCA TTTTTGGTTGCGGGT AM414 372351 - 373721 + | hypothetical protein TERM 158 374413 - 374424 + G 84 -4.4 -5.24129 | ATGCACGAGTGGGGG TGGA GGAT TCCA TTTTTTATCGCAGCC AM415 373831 - 375153 + | hypothetical protein nadE 376663 - 375143 - | NH3-dependent NAD+ synthetase protein TERM 159 376029 - 376042 + g 71 -6.7 -4.14257 | opp_overlap 376028 376038 TCTTCGGACCAAAGG GCACA CAAG TGTGC TTTGTCGTTGTTACA hemB 377710 - 376670 - | delta-aminolevulinic acid dehydratase TERM 160 377607 - 377637 + g 82 -8.3 -4.58395 | gap 1 ACGATATTGCGCATC CAAGCGTG-GGCGC GCCT GCGCCGCATTCTTG TTTTTGGAAACTGCA TERM 161 378294 - 378278 - g 74 -2.3 -5.06414 | GTCGCCGAAGAAAAA GTTTATT TGG ATTAAAC GTGACATAACTTCCA pbpA2 377907 - 379496 + | penicillin-binding protein AM419 379536 - 382376 + | hypothetical protein AM420 382538 - 384001 + | hypothetical protein ssb 384912 - 384373 - | single-strand binding protein mcd 385083 - 386465 + | malonyl-CoA decarboxylase TERM 162 386580 - 386596 + G 74 -2.1 -5.06414 | overlap 386581 AATAGCAAGCTATTC TCCGGGG CCT CTACGGG TTTTTGTTCCGAGCC gatB 386478 - 387935 + | aspartyl/glutamyl-tRNA amidotransferase subunit B fabI 388435 - 389283 + | enoyl-[acyl-carrier-protein] reductase TERM 163 389391 - 389414 + F 71 -11 -2.79796 | gap 1, opp_overlap 389388 389378 AATGTGCAGCAATTG GCGC-GCATGG GTG CCGTGCTGCGC TCTACTGCCGTCAAA TERM 164 390549 - 390530 - g 72 -3.6 -4.79752 | gap 1 GCCAAGAACATAAAA TCCAACATC AGG GA-GCTGGA GGGTGCGCTGAACAA dnaA 389525 - 390940 + | chromosomal replication initiation protein AM431 392039 - 391044 - | hypothetical protein TERM 165 391385 - 391403 + g 100 -8.8 -5.39221 | opp_overlap 391387, overlap 391387 GTTCGGGACACACCA CATCCGAG CTC CTCGGAGG TTTTTTAGTTCTTAT TERM 166 392800 - 392777 - g 79 -8.9 -4.2349 | TCGTCAGAGGGAAAA TTTGCGCCG CATCTT CGACGCAAA TCAGGAATGCAATGC AM432 392119 - 392823 + | hypothetical protein TERM 167 392827 - 392839 + F 75 -9.1 -3.86346 | opp_overlap 392813 ATGCCCGTGTAGCGG CGAGC ACG GCTCG TTTGTCGAGGCCTGG pdxJ 393003 - 393764 + | pyridoxal phosphate biosynthetic protein PdxJ TERM 168 394037 - 394022 - T 72 -8.2 -3.84825 | overlap 394023 CCGAGCCACATTAAA CGCCGC CCAC GCGGCA CACCTCCCACACTGC TERM 169 394917 - 394931 + T 73 -2.8 -4.95155 | CTGGTAGCGCATTTG GGAATA TAT TAATCC TTTTTATCCTATAGA AM435 395825 - 394935 - | hypothetical protein TERM 170 395762 - 395774 + g 74 -4.7 -4.83615 | CAGCGCTGCTATTCG CGAGC AGA GCGCG TTTTTGTGCGGCGTG AM436 396400 - 395807 - | hypothetical protein TERM 171 396477 - 396467 - H 74 -2.4 -5.14563 | TTGTCCACGAAAAAA CCAG CCA CGGG TACAGCACTTTAGTG TERM 172 397809 - 397796 - g 76 -3.1 -5.14563 | gap 1, overlap 397798 GTTGCGAGGAAAAAA CT-CGC GAT GCGCAG TGCGCTGGACCGGCG coaE 397133 - 397849 + | dephospho-CoA kinase thiC 399700 - 397898 - | thiamine biosynthesis protein ThiC TERM 173 398921 - 398936 + g 74 -4.6 -4.82333 | GTCCGCTCCGTACGC GACGGC GAGC GCCATC TTTTTCACTTCTTCT TERM 174 399740 - 399750 + r 76 -8.2 -4.24183 | opp_overlap 399738 399740, overlap 399737 GTTTAGGATAGAACA GGCG TCA CGCC TTCTTGTTTGTTCTC AM441 400409 - 399744 - | hypothetical protein TERM 175 400427 - 400417 - R 79 -8.2 -4.30014 | CCTAGCAATGGAAAA GGGC GAA GCCC AACAGCAGCTATATA rpoZ 400860 - 400474 - | DNA-directed RNA polymerase omega subunit AM445 401518 - 401195 - | hypothetical protein TERM 176 401807 - 401823 + H 74 -3.7 -5.03994 | CCGGTGCAGAGTTTG TATGCTA TGA TTGCATA TTTTTATGTGTCAGG TERM 177 402115 - 402137 + G 80 -10.6 -3.67976 | overlap 402116 ATGGGCTCAAAGTTC TGCATCCCAT AGG GTGGGATGCG TTTGGGCTTCCTGCA TERM 178 402116 - 402136 + G 74 -11.9 -2.80464 | overlap 402115 TGGGCTCAAAGTTCT GCATCCCAT AGG GTGGGATGC GTTTGGGCTTCCTGC TERM 179 403209 - 403229 + G 72 -9.7 -3.34398 | overlap 403208 403224 403225 GGTATAGTGCCGGTG GATAGGCAG GAT CTGCCCATC TCTTTGCCCGAGGAG TERM 180 403725 - 403703 - g 80 -4.8 -5.10208 | CAAGTCGAAGAAAAA TGTTGTGGAT CCC AGCCACATCA TAAAAAAATACGGGG leuS 401901 - 404390 + | leucyl-tRNA synthetase TERM 181 405299 - 405315 + GF 76 -4.4 -4.96848 | overlap 405300 GGGACAGGGTCTTGG TGGAGA CAGAC TCTCCG TTTTTGTGTCCGGAG AM447 404701 - 405489 + | hypothetical protein TERM 182 406058 - 406047 - gT 70 -2.2 -4.98758 | AAAAACGGACAAAAA CACC CATG GATG CGCTGTCAGATGGAG pyrF 405446 - 406165 + | orotidine 5'-phosphate decarboxylase TERM 183 406220 - 406234 + T 73 -5.6 -4.61231 | overlap 406213 406222 GGATGTTGTGGTCGC GGCCCA TTT TGGGGC TTTTTGGCCGTATGG ccmE 406680 - 406258 - | cytochrome c-type biogenesis protein CcmE surE 407587 - 406802 - | stationary-phase survival protein nuoC1 408879 - 408316 - | NADH-ubiquinone oxidoreductase subunit TERM 184 408903 - 408913 + r 74 -8.2 -4.01089 | CGCCCCCCTCACTCC GGGG TTA CCCC TTATTATCTTCTGCT nuoB 409412 - 408885 - | NADH dehydrogenase subunit B nuoA 409824 - 409417 - | NADH dehydrogenase I chain A uvrA 413011 - 410141 - | excinuclease ABC subunit A TERM 185 410536 - 410555 + g 76 -4.2 -4.93877 | gap 1, overlap 410537 CATAGCCCATGCCGA CCTCC-CGC AAG GCGTGGAGC TTTTCTTTGATCAAC nusB 413578 - 413045 - | N utilization substance protein B ribH 414020 - 413571 - | riboflavin synthase subunit beta yidC 415770 - 414052 - | putative inner membrane protein translocase component YidC TERM 186 415054 - 415065 + g 78 -5.8 -4.75356 | overlap 415040 CGTTGCGCCAACTCT GGCA CCAC TGCC TTTTTGCATGTCTTT pssA 416928 - 416086 - | CDP-diacylglycerol--serine O-phosphatidyltransferase TERM 187 416863 - 416838 - G 100 -14.1 -4.16016 | gap 1, opp_overlap 416837 416836, overlap 416839 TGAGCCCTGAACAAA GCCCCAGCATGG TGA CCATGCTGG-GC AGCAATCTTGTTATT TERM 188 416863 - 416839 - G 86 -14.3 -3.09288 | opp_overlap 416837 416836, overlap 416838 GAGCCCTGAACAAAG CCCCAGCATGG TGA CCATGCTGGGC AGCAATCTTGTTATT psd 417693 - 416989 - | phosphatidylserine decarboxylase AM465 421353 - 417952 - | hypothetical protein TERM 189 419444 - 419462 + g 86 -3.1 -5.68489 | overlap 419444 CAGGCTTGTAGAAGT GGCAG AAAATCTGG CTGCC TTTTTTCTTGTTGTG TERM 190 420986 - 420999 + g 80 -2.3 -5.41143 | GTTAAGTTCAACCCT TCCGG GCTA CCGTA TTTTTTTAGCGCGTA TERM 191 421420 - 421398 - R 76 -6.2 -4.65916 | overlap 421417 TCTACCGCAACAAAA TGCGTCCGCG TGC CACAGATGCA GGCCACCCAGCCGGC TERM 192 421545 - 421566 + r 73 -3 -4.98436 | gap 1, overlap 421548 CGTTAGTGCCGGCGG CATCCAGTC CCTGT GGCTGG-TG TTTTTGTGGTATTCG TERM 193 421735 - 421686 - R 71 -6.4 -4.30719 | gap 2, opp_overlap 421690, overlap 421688 GTGCTTGATAACAAA CTGTGTGCCGCACAACCAGCACCG TTAC CGG-G-TGGCTGTGCAGCACTATG TACCCAAGCTTAGTA TERM 194 421690 - 421731 + r 70 -10.2 -2.87463 | gap 2, opp_overlap 421688 421686 TTGATAACAAACTGT GTGCCGCACAACCAGCACCG TTAC CGG-G-TGGCTGTGCAGCAC TATGTACCCAAGCTT AM470 425556 - 421771 - | hypothetical protein TERM 195 421907 - 421923 + g 79 -6.5 -4.63218 | GATCTGCCTGCCTTT TCCGCTG ATG CAGGGGA TTTTCTTCCCGCCCC TERM 196 423607 - 423625 + g 70 -3 -4.81212 | GGGTGTACTGCTCAC GTTCCGTG GTG CGGGGGAC TTTTGTTCTCCTCCC TERM 197 425615 - 425599 - H 74 -2.3 -5.16237 | opp_overlap 425599 AAGTTTATTAAAAAA TTAATGA AAG TCAATAA ATTAATAATTAATAT TERM 198 426783 - 426764 - g 76 -8 -4.1822 | GGTGACCGGAACAAA TTACAAGA GATG TCTTGTAA TGCAGCCAAGCACGC murG 425738 - 426856 + | UDP-N-acetylglucosamine-N-acetylmuramyl-(pentapeptide pyrophosphoryl-undecaprenol N-acetylglucosamine) TERM 199 426895 - 426908 + F 74 -2.3 -5.1634 | opp_overlap 426891 426895, overlap 426885 426895 ATAGTTACAGAGAAG CCGGA GGGT TCGGG TTTTTGTGTATTTGT efp 427002 - 427568 + | elongation factor PEF-P suhB 427571 - 428332 + | extragenic suppressor protein rluC 428329 - 429219 + | ribosomal large subunit pseudouridine synthase pleD 430836 - 429469 - | response regulator PleD AM476 431419 - 431033 - | hypothetical protein TERM 200 431097 - 431113 + gr 70 -8.7 -3.54129 | GCGCGTCCTGTCTCT GAGGCAT CCA GTGCCTC TTTACCGCGACTATC TERM 201 431180 - 431192 + gr 73 -3.3 -5.03314 | TAGAACCCCATCATC GCCCA TTA TGCGC TTTTTTGGCACTGCA AM477 436238 - 431385 - | hypothetical protein TERM 202 431856 - 431868 + gH 76 -6.3 -4.63218 | GATCCTCTGTGCTAT TTTGG GAT CCAAA TTTTGTTGCGGCAGG TERM 203 433410 - 433421 + gH 73 -5.8 -4.47611 | AGCCCATGCCCCTCT GGCA GTAA TGCC TATTTTTTTATGGTC TERM 204 435370 - 435398 + gH 70 -3.2 -4.82855 | ACAACGTATAGTGGC TCTTTACTTTGC GTCTG GCAACTTAAAGA TTTTTGGGTTTGCTG TERM 205 436547 - 436563 + H 76 -6.5 -4.52589 | overlap 436549 436559 GGTTATGATATGTCG CACAGGT GTT ACCTGGG TTTTATGTGCAGCAC AM480 436634 - 437359 + | hypothetical protein TERM 206 437633 - 437608 - g 86 -6.1 -5.10163 | AATCCGAAAACAAAA GTATTGCGGAG TTGA CTGCGCACTAC ACCAAGCTGTTTCAT cysS 437361 - 438761 + | cysteinyl-tRNA synthetase nrdF 439009 - 439983 + | ribonucleotide-diphosphate reductase subunit beta TERM 207 440005 - 440015 + G 73 -3.2 -4.92363 | overlap 439999 439998 CCTATCGGTGGTCTG CCGA CCC TTGG TTTTTGTGGCTATTT AM485 439961 - 440560 + | hypothetical protein TERM 208 440846 - 440832 - T 95 -5.6 -5.55769 | opp_overlap 440832 GCGGATAACAAAAAA TGCTGC GGA GCCGCA CAATCGTTTTTCTGC TERM 209 440974 - 440951 - T 93 -8.8 -5.03145 | CAAGTGCGCAAAAAA GCGCGTGACG CCTG CGTCACCCAC GCCATTCGGGATGCG AM486 441435 - 441151 - | hypothetical protein AM487 441651 - 442682 + | hypothetical protein TERM 210 443666 - 443706 + GF 71 -11.4 -2.79878 | gap 2, overlap 443665 443668 CTGCCATGACGGAGG CGC-ATCTCAGGCACA-TGT GGG ACATTGTGCCTGAGGTAGTG GTTTGGATGGATGGC TERM 211 443668 - 443704 + GF 70 -10.4 -2.9462 | gap 2, overlap 443666 443665 GCCATGACGGAGGCG C-ATCTCAGGCACA-TGT GGG ACATTGTGCCTGAGGTAG TGGTTTGGATGGATG TERM 212 444078 - 444067 - gf 71 -7.2 -4.11623 | TACCAGCAAATCAAA GCGC TGCA GCGC GAACAATACAATGGG dnaG 442810 - 444648 + | DNA primase AM489 444617 - 444838 + | hypothetical protein TERM 213 444844 - 444822 - T 100 -9.9 -4.8667 | gap 1, opp_overlap 444839, overlap 444811 CAGACGCTAGAAAAA GCCGCG-TAG CTTC CTAGCGCGGC TGGGGTGCCGCAATT rpoD 446711 - 444813 - | RNA polymerase sigma factor AM492 447876 - 446914 - | hypothetical protein TERM 214 447952 - 447941 - H 70 -4.4 -4.71776 | CAACACCGAACAAAA CATC GTAC GATG AGTGCTTAAGATTTT TERM 215 448232 - 448216 - g 70 -8.7 -3.56142 | TTCAGGAATAAGCAA GCACGAT AAC ACCGTGC AGAGGGCTATAGGGC ispE 448016 - 448885 + | 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase AM495 449444 - 449010 - | hypothetical protein TERM 216 449756 - 449771 + r 76 -5.4 -4.88388 | gap 1, overlap 449759 TGCCGAGCAGGGTGT GCC-TCG CAC CGATGGC TTTTTGTGCGATTAT cutA 450216 - 449860 - | periplasmic divalent cation tolerance protein dhkA 452743 - 450260 - | sensory box histidine kinase/response regulator TERM 217 450596 - 450625 + g 70 -11.5 -2.52676 | overlap 450585 450580 450579 GAATGCCCGCACCGG GTCTTCGTCTTCT ATTA AGAGGACGGAGGC TGAGTTGCCCCACTC AM499 453904 - 453242 - | hypothetical protein AM500 454148 - 454468 + | hypothetical protein AM501 454671 - 456080 + | hypothetical protein TERM 218 456130 - 456144 + F 70 -2.8 -4.81357 | opp_overlap 456131, overlap 456131 GTCTACGTGTCGAAA ATCCTT TCC AAGGAC TTTATTTTATAATAT TERM 219 458606 - 458594 - g 81 -6.3 -5.01811 | CTATCAAAGGAAAAA GTGAT GAT ATCAC GCTGGAAGAAGCTGT topA 456208 - 458646 + | DNA topoisomerase AM504 459342 - 458866 - | hypothetical protein TERM 220 460038 - 460050 + r 76 -7.7 -4.32201 | AACAAAAACTTACGC TGTGC GCC GCACA TTTTCCATTACTTCA TERM 221 460453 - 460430 - R 79 -6.6 -4.67697 | overlap 460432 GTGCAAAACAACAAA GGCTATGGCG TACT CGCCATCGTC GCTCAGCGAAAGCTC acpS 460771 - 460409 - | holo-(acyl-carrier-protein) synthase proS 462045 - 460768 - | prolyl-tRNA synthetase TERM 222 460815 - 460831 + g 70 -4.3 -4.74103 | opp_overlap 460793, overlap 460817 CAGTACACCTTTCTG TTGCTCC GTT GGCGCGA TTTTTCAATTCCACC AM508 463361 - 462309 - | hypothetical protein coaD 463648 - 464160 + | phosphopantetheine adenylyltransferase trxB 465308 - 464331 - | thioredoxin reductase TERM 223 464888 - 464868 - G 73 -3.1 -5.00616 | overlap 464869 464871 CTCTCCCTTAAAAAA CGAGCCATC ACA GGTGGCGCA GGCAGATACGCCCTT tdpX1 465928 - 465305 - | thioredoxin peroxidase 1 aatA 466204 - 466884 + | aspartate aminotransferase A TERM 224 467439 - 467473 + G 80 -4.8 -5.07107 | overlap 467440 467441 CTCCAGCATAAAGTT GCCGTTGTGCCGGGCG TAG CGTTTGGTGCACCGGA TTTTTTCAGGATTTC aatA 466941 - 467561 + | aspartate aminotransferase A TERM 225 467647 - 467661 + T 74 -4.2 -4.82667 | overlap 467648 TGCAGCAACCTGTTA GCGTGA CAG TCACGG TTTTTAGTCTCCTGG AM516 469819 - 467807 - | hypothetical protein TERM 226 468066 - 468083 + g 74 -4.1 -4.93696 | TCGACAAGATCCTCC GGATAGT TGCT ACTACCC TTTTTCCTGTTTACC AM517 470464 - 469871 - | hypothetical protein AM518 471793 - 470483 - | hypothetical protein TERM 227 471203 - 471217 + g 74 -7.2 -4.2717 | GGCGGCCTTTTCTGA TTTCTG TGG CAGAAA TTTTGGTAAAATCAT AM520 473121 - 471817 - | hypothetical protein TERM 228 471842 - 471853 + g 82 -3.6 -5.22006 | overlap 471826 CGACCAGATACGCTC GCTC GTTT GGGC TTTTTCTTCTGATGA TERM 229 472388 - 472361 - G 70 -4.2 -4.65895 | gap 1, overlap 472365 472384 TTTCGCAGCGAAAAA CCAC-TCCCTGCA AGA TACAGGAATGTAG TGTACAAAAACGCAG TERM 230 472918 - 472902 - G 71 -5.1 -4.53036 | overlap 472897 GCACAAACACCAAAA CCTCTTT GAT AGAGAGG CTGGCTGCGTAGCAC TERM 231 473209 - 473199 - H 72 -4 -4.86731 | CCCGTGTAAACAAAA TTCT TTT AGAA ACTTACGTTTTTATC mreC 473383 - 474249 + | rod shape determining protein mreB 475467 - 474358 - | rod shape-determining protein TERM 232 476585 - 476607 + G 70 -3.4 -4.84527 | gap 1, opp_overlap 476586, overlap 476586 476586 CTGCAAGGTTGTAAA TG-GCACCG CTAGGC CGGTGCGCG TTTTTGATGTCTAAA truB 475701 - 476621 + | tRNA pseudouridine 55 synthase TERM 233 476637 - 476654 + F 76 -3.3 -5.09685 | AGTTCTTTATGTAGC CGAGAGG AGGA CCTTGCG TTTTTATGTCTATTA rpsO 476660 - 476941 + | 30S ribosomal protein S15 TERM 234 476955 - 476967 + F 76 -6.9 -4.58395 | GATGTTGTTGTTTGT GCGCT ATA GGCGC TTTTTAGAGGGTAGG TERM 235 478990 - 478975 - g 87 -4.7 -5.38047 | opp_overlap 478988 TAGCGAGATAAAAAA CGAAC ACATAG GTTCG GTGTCCGATGTCCTG pnp 476993 - 479410 + | polynucleotide phosphorylase/polyadenylase TERM 236 479458 - 479479 + G 89 -2.3 -5.78622 | gap 1, opp_overlap 479445, overlap 479446 479442 CACCGCAGGGCTCGT GC-GTGCT TCGCTTC AGCACCGC TTTTTTTTGAGGTGG AM527 479416 - 480192 + | hypothetical protein lepA 480327 - 482126 + | GTP-binding protein LepA AM529 483482 - 483114 - | hypothetical protein msp1a 483889 - 485769 + | major surface protein 1a TERM 237 486046 - 486088 + F 84 -10.5 -4.05181 | gap 1, overlap 486084 TTGGGTTGTGTGCTT GGCAGGT-GCCGCGGCTTTC ATAT GAGCGCTGCGGTGACCGGCC TTTGCTGTTTGTGCT TERM 238 487088 - 487108 + G 78 -6.1 -4.90381 | GCTGGATTCTCCCGA TTCTCTGGC TAC GCTGGGGAA TTTTGTTGTGTTGGG mlp2 486324 - 487166 + | major surface protein 1a-like protein 22 TERM 239 487697 - 487684 - g 83 -9.5 -4.19238 | CCGTCAATGCCAAAA GGGGC CAAG GCCCC ACACCGCGGCTGGTG TERM 240 487718 - 487731 + G 78 -5.9 -4.87786 | overlap 487717 GCGGCTGGTGATGCT GGCGG ATCG TCGCC TTTTTGTGGAATTGC TERM 241 487886 - 487866 - g 71 -10.3 -3.0634 | AAGTTTACGTTAAGA GCGCAGCAG TGT CCGCGGCGC TTGGAGTGATGTCCT mlp3 487640 - 488515 + | major surface protein 1a-like protein 3 mlp4 488938 - 489873 + | major surface protein 1a-like protein 4 AM537 489895 - 490626 + | hypothetical protein TERM 242 491855 - 491835 - g 75 -8.9 -3.88946 | CAGCCCACACAAGAA GTTGCGCAG CAG CCGCGCAGC ACACCGGAGGAAGTA TERM 243 494989 - 495010 + G 78 -5.8 -4.84673 | AACGGACAGGAGCGC CGACGGAG GAAACA CTGCGTCG TTTTATGTTGTTTAG TERM 244 498869 - 498884 + G 71 -5.4 -4.55295 | gap 1, opp_overlap 498869 ATTCTTTACTAGAAA CACC-CG ATG CGAGGTG TTTATTTGTGAGCCC AM540 491451 - 498992 + | hypothetical protein AM541 499054 - 500883 + | hypothetical protein TERM 245 501974 - 501949 - g 76 -8.3 -4.19238 | TTTTCAAGGGTAAAA CTCATCACCCC CTCA GTAGTGATGAG CAAGACCAAGGACAT AM543 501283 - 503181 + | hypothetical protein TERM 246 503261 - 503277 + F 79 -7.2 -4.56358 | CCTCCAGAAAGTGCA GCCGCG GTATG TGCGGC TTTTGTGTGCATGTG TERM 247 503413 - 503401 - f 74 -6.9 -4.33803 | AAAGACACCAACAAA GCGGA TTA CCCGC AGTTCAACAGGTGGC TERM 248 504314 - 504330 + G 76 -6.7 -4.46212 | CGTTTTGTTCATGAG TTTGTTT TAA AAACAAA TTTTATCGTAACCGG AM545 503759 - 505636 + | hypothetical protein AM546 505658 - 505891 + | hypothetical protein TERM 249 507369 - 507355 - g 74 -8.5 -4.07885 | TATGTGCTGGTAAAA GCCGC GGTAT GCGGC ACGTATGAGGAAGGT TERM 250 507555 - 507526 - g 84 -4.8 -5.30616 | GCACTCAAAGAAAAA GCCGTGCGGGCG TCTGAG CTCTCGCATGGC GGCAATGTTCGCAAC AM547 506074 - 507987 + | hypothetical protein TERM 251 508063 - 508080 + F 76 -5.5 -4.89233 | TGTGTGTAACCGCGG CTTCCGC GCGC GTGGGAG TTTTTGCTGTTGCTG TERM 252 510464 - 510449 - g 77 -9 -4.07568 | GGTGCCGTGTTAAAA CTTGCC AACA GGCAAG AGTGCGAGATATTTT AM550 508787 - 510619 + | hypothetical protein AM551 510801 - 512963 + | hypothetical protein thiL 513904 - 512951 - | thiamin-monophosphate kinase AM555 514140 - 515027 + | hypothetical protein bioA 515209 - 516492 + | adenosylmethionine-8-amino-7-oxononanoate aminotransferase AM557 516933 - 517268 + | hypothetical protein TERM 253 517347 - 517360 + T 100 -9.5 -5.26918 | ATAGCACCTAGATGC CGCGC AACT GCGCG TTTTTTGTCGGGTGT ksgA 518242 - 517430 - | dimethyladenosine transferase tpiA 518375 - 519181 + | triosephosphate isomerase TERM 254 519407 - 519423 + G 71 -6.5 -4.14056 | AATTTGCTCTACTTC CACAACC GCT GGTAGTG TTTATAATTTGAACT AM560 519165 - 520184 + | hypothetical protein AM561 520194 - 521219 + | hypothetical protein AM562 521828 - 521178 - | hypothetical protein folB 521880 - 522233 + | dihydroneopterin aldolase TERM 255 522261 - 522277 + F 86 -3 -5.64274 | ATTTGTTAGAGTGCG GCAAGT TCAGC ATTTGC TTTTTTTATGCGTAG mdh 522285 - 523238 + | malate dehydrogenase ubiG 524231 - 523554 - | 3-demethylubiquinone-9 3-methyltransferase infB 524186 - 524755 + | translation initiation factor IF-2 AM569 524966 - 524724 - | hypothetical protein rpiB 525159 - 525599 + | ribose 5-phosphate isomerase ubiG 525692 - 526396 + | 3-demethylubiquinone-9 3-methyltransferase gcp 527003 - 526497 - | O-sialoglycoprotein endopeptidase AM573 527219 - 527013 - | hypothetical protein AM574 528138 - 527461 - | hypothetical protein AM576 528949 - 528119 - | hypothetical protein AM578 529647 - 528928 - | hypothetical protein AM579 530105 - 529698 - | hypothetical protein AM580 530466 - 530080 - | hypothetical protein TERM 256 530223 - 530237 + g 86 -5.7 -5.06735 | GCTGTAATGCATTCC TTGCG TACTT CGCAA TTTTTATGGTTTCTA AM581 531017 - 530463 - | hypothetical protein AM582 531367 - 531026 - | hypothetical protein putA 535012 - 531869 - | bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase TERM 257 534032 - 534042 + g 74 -2.4 -5.16237 | CACAAAGTCAATAGC GGCC AGC GCCC TTTTTTGATAAGCTT TERM 258 535061 - 535043 - H 78 -6 -4.85618 | AAAGAATCAACAAAA CGGCAAAA CAC TCTTACCG AGCTACAACAAAGCG TERM 259 535093 - 535074 - H 71 -6.3 -4.33417 | overlap 535075 535076 CCGAGCTACAACAAA GCGCCGC GCAGGG GCCGCGC AACATGAGCCCAAGA fabG 535097 - 536005 + | 3-oxoacyl-reductase AM586 536391 - 536059 - | hypothetical protein TERM 260 536440 - 536422 - H 78 -6 -4.85618 | AAAGAATCAACAAAA CGGCAAAA CAC TCTTACCG AGCTACAACAAAGCG TERM 261 536472 - 536453 - H 71 -6.3 -4.33417 | overlap 536454 536455 CCGAGCTACAACAAA GCGCCGC GCAGGG GCCGCGC AACATGAGCCCAAGA AM589 537408 - 538310 + | hypothetical protein rlpA 539162 - 538467 - | rare lipoprotein A precursor xthA2 540191 - 539361 - | exodeoxyribonuclease III TERM 262 540304 - 540325 + r 76 -7.3 -4.3767 | gap 1 GGAGTAGCGGATCCA CCCACTCACT TTA GGTG-GTGGG TTTGTTGTGGTGTAC AM592 541048 - 540314 - | hypothetical protein rpmJ 541381 - 541500 + | large subunit ribosomal protein L36 AM594 541529 - 541888 + | hypothetical protein AM595 542551 - 541901 - | hypothetical protein TERM 263 542400 - 542378 - G 86 -2.7 -5.66338 | gap 1, overlap 542381 542382 542392 AAAGAGAAGAAAAAA GCAGC-TGCA AAAA TGCAAGCCAC CCCGCTCAATTCTAC rpmA 542848 - 542576 - | 50S ribosomal protein L27 rplU 543154 - 542852 - | 50S ribosomal protein L21 eno 543637 - 544932 + | enolase 1 (2-phosphoglycerate dehydratase 1) obgE 544934 - 545980 + | GTPase ObgE TERM 264 546157 - 546170 + GT 86 -8.1 -4.60797 | opp_overlap 546157 GTAAGGTTTCATATA CAGGC TCAA GCCTG TTTTGTATGTGGGGC AM603 545943 - 546332 + | hypothetical protein mraW 547378 - 546503 - | S-adenosyl-methyltransferase MraW TERM 265 546576 - 546587 + g 95 -5.8 -5.38054 | ACCTCCTCATCTGTC GGCA TGAT TGCC TTTTTATTTATCAAG TERM 266 547454 - 547465 + r 76 -5.8 -4.69664 | CTTTTTTGGGATACG GCCT ACCA AGGC TTTTTAGATCATATG ygfA 548086 - 547550 - | 5-formyltetrahydrofolate cyclo-ligase TERM 267 548061 - 548074 + g 74 -2.3 -5.10461 | overlap 548062 AAGCCGCGGTAATGG CCCCT CAGA AGGGA TTTTTCTTCCATAAA TERM 268 548126 - 548138 + H 74 -7.7 -4.13767 | opp_overlap 548128 548137, overlap 548137 CACAAAACCGTAAGC CATGG TAA CCATG TTTTGGCATCCGGGC TERM 269 550617 - 550603 - g 70 -2.7 -4.85782 | opp_overlap 550603 550608 550616 TGTCGCAAAAACAAA CTGGC ACCGG GCCGG CTTCTGCTGCTAAGC TERM 270 552840 - 552814 - g 74 -12.4 -2.85351 | overlap 552816 GCTTGGTACACTACA TAGCACTCGCAA CAG TTGCGAGTCCTA GACTGAGCAAAGGGC TERM 271 552838 - 552816 - g 70 -10.6 -2.97747 | overlap 552814 TTGGTACACTACATA GCACTCGCAA CAG TTGCGAGTCC TAGACTGAGCAAAGG TERM 272 553193 - 553176 - g 70 -3.3 -4.76041 | CACACCCATGAAAAA GGAGGTG AGTT CATCCCC TACGCTGTGTTCGTC AM612 548370 - 553613 + | hypothetical protein TERM 273 554552 - 554532 - g 83 -5.5 -5.14985 | opp_overlap 554536 GCAAATAGAGAAAAA GCCATGTAT CTG ATACATAAC TTTGGCAACATATTG AM613 553836 - 555356 + | hypothetical protein AM615 556453 - 555884 - | hypothetical protein AM616 558397 - 556586 - | hypothetical protein TERM 274 558060 - 558043 - G 74 -4.1 -5.00616 | opp_overlap 558045, overlap 558054 CCTTCGGGGAAAAAA TATCCCG AAAG CGCGATA TTGACCTATCGCCAA TERM 275 558183 - 558168 - G 70 -8.2 -3.66356 | overlap 558178 558179 ATTCCCAACGCCAAA CCGCAC ACAA GCGCGG CAGTACCCCGCATGA trxB2 559624 - 558602 - | thioredoxin reductase TERM 276 558885 - 558900 + g 76 -6.8 -4.56978 | opp_overlap 558885 558886, overlap 558886 AACGGTAATAGAAAA TCCGCA TCTA TGCGGG TTTCTTCTTTAGAGG TERM 277 558900 - 558885 - G 70 -4.6 -4.6821 | opp_overlap 558885 558886, overlap 558886 AACGGTAATAGAAAA TCCGCA TCTA TGCGGG TTTCTTCTTTAGAGG TERM 278 559572 - 559561 - G 74 -3.6 -5.02231 | opp_overlap 559566, overlap 559563 GAAAAACAGTAAAAA GCCC GACC GGAC CGGCTCCTATAATCG pmbA 561039 - 559705 - | pmbA protein TERM 279 559787 - 559771 - G 82 -7.3 -4.65838 | overlap 559762 559779 559781 GACAGATCGCAAAAA CGACAAA TCA TTTGCCG CGCGCATGCCAGCAA folE 561645 - 561049 - | GTP cyclohydrolase atpG 562515 - 561652 - | ATP synthase gamma chain nuoD 562810 - 564006 + | NADH dehydrogenase subunit D nuoE 564011 - 564520 + | NADH dehydrogenase subunit E dnaQ 564510 - 565208 + | DNA polymerase III epsilon chain AM626 566825 - 565245 - | hypothetical protein TERM 280 566440 - 566426 - G 71 -7 -4.22652 | opp_overlap 566426 GCATAGCAGCCAAAA CGCCAG ATA CAGGCG TGATTCTGCCATCCA AM628 567191 - 567829 + | hypothetical protein TERM 281 568296 - 568284 - g 87 -7.7 -5.00846 | GAAACATCATAAAAA GCATC GCG GATGC AGCAATAGGCCCCGA AM629 568265 - 570115 + | hypothetical protein AM630 570782 - 570249 - | hypothetical protein rpoH 571648 - 570776 - | RNA polymerase sigma-32 factor AM632 571770 - 572084 + | hypothetical protein AM634 572081 - 572326 + | hypothetical protein TERM 282 574030 - 574019 - g 72 -3.6 -4.83169 | ATTTGCCCAGAAAAA CCCG ACTG CGGA CACCTTGCTAACTAC TERM 283 575248 - 575258 + G 70 -3.2 -4.86731 | overlap 575239 TAAAAACCGGAAGGT CGGA TAT TCTG TTTTCTTTGCCCCAC TERM 284 578742 - 578723 - g 73 -5.7 -4.4727 | overlap 578728 GCAAGAGGCACAAAA CGAAACG GACAAA CGCTTCG TCAGGCACAAGGAGA TERM 285 579508 - 579558 + G 74 -11.1 -3.14132 | gap 1, opp_overlap 579520, overlap 579525 579534 CACCGCGCAGCAGTA CCGCTGACCGAAGGGATGGCCCCG ACGG CGGTG-CGTCTTTTCGGGCAGAGG TTGGTCAACCGCACG AM638 572766 - 582350 + | hypothetical protein nuoH 583554 - 582496 - | NADH dehydrogenase subunit H nuoG 585631 - 583556 - | NADH dehydrogenase subunit G TERM 286 584843 - 584853 + g 76 -6.8 -4.54047 | ATTCAAGCCATCGTA CGAG AAT CTCG TTTTATCTGAAATCC AM642 585854 - 585639 - | hypothetical protein gyrB2 588416 - 586035 - | DNA gyrase subunit B ubiX 588750 - 589355 + | 3-octaprenyl-4-hydroxybenzoate carboxyl-lyase AM647 589879 - 589454 - | hypothetical protein TERM 287 589861 - 589849 - G 80 -3.3 -5.36689 | AAAGGAAAAAGAAAA GCAGC CTG GCCAC TGACAAAACCACATA TERM 288 590116 - 590129 + r 73 -3.1 -5.04325 | GCACGGCGTAACATA TGGCA AATT TGCTA TTTTTATAATTTACC AM649 591602 - 590379 - | hypothetical protein adx1 591927 - 591574 - | ferredoxin [2Fe-2S] adrenodoxin-like precursor adx1 TERM 289 591985 - 591973 - R 79 -9.1 -4.18018 | TCTCTTCATGTAAAA GGGCA TCT TGCCC CACACAATCAACAAA hscA 593761 - 591953 - | heat shock protein TERM 290 592515 - 592499 - G 74 -9.5 -3.56821 | AGTATACGTGGTAAA CTCTTGT GTC ACAAGAG CCGGCACCGGAGTAT TERM 291 593128 - 593116 - G 73 -5.5 -4.63527 | CCAGTACTTGAAAAA CCCCA TTA TGGAG CCTTAGCACGGAAAC hscB 594297 - 593749 - | chaperone protein nifU 594979 - 594578 - | scaffold protein TERM 292 594811 - 594830 + g 71 -5.8 -4.41797 | gap 1, opp_overlap 594810 CGAATGTCTTAAACT TGGCATCAA CTA TTG-TGCCA TTTTCATCTACTTTT iscS 596214 - 594988 - | cysteine desulfurase TERM 293 596203 - 596182 - G 78 -2.2 -5.26875 | overlap 596186 CTGGTAATCAAAAAA CACAGGAG GTTGTA CTCCCTTG CTCCCCGTCATACTT AM656 597809 - 596247 - | hypothetical protein TERM 294 597691 - 597679 - G 75 -9.1 -3.90922 | opp_overlap 597678 597679 ACTCTCTCCAAATAA CCCTC AGA GAGGG ATTGCTTGTCCGCTA TERM 295 598166 - 598177 + G 74 -7.2 -4.23892 | CTCTACAGGGTATTT GCCG TGAA CGGC TTTTCCGTCCTTCGG AM657 598007 - 598711 + | hypothetical protein lysK 599013 - 600614 + | lysyl-tRNA synthetase AM660 600760 - 601101 + | hypothetical protein truA 601890 - 601147 - | tRNA pseudouridine synthase A pyrB 602783 - 601887 - | aspartate carbamoyltransferase catalytic subunit AM664 603605 - 602946 - | putative translaldolase atpC 603988 - 603602 - | ATP synthase epsilon chain atpD 605518 - 604058 - | F0F1 ATP synthase subunit beta TERM 296 604780 - 604794 + g 70 -10 -3.28924 | opp_overlap 604760 CCATGGTCAAAGCGG TGAGGG CCA CCCTCA TTCTGGCCCCGGGTG mgtE 605894 - 607345 + | magnesium transporter TERM 297 608408 - 608381 - g 72 -4 -4.82855 | overlap 608385 CACGAAATTCAAAAA CCCAGAGCATCC TTAT GGCAACTCTGAG GATGCACCATCCGAG ftsJ 607824 - 608429 + | cell division protein AM670 608913 - 609782 + | hypothetical protein AM671 609843 - 610784 + | hypothetical protein TERM 298 611555 - 611591 + G 77 -9.5 -3.69702 | opp_overlap 611554 611557, overlap 611557 AGCAAGTCCATATAT CATTGCAGCTGTAGCAG TGG CTGGTGTAGCTGCAATA TTATGTTCAGTGATA TERM 299 611557 - 611589 + G 80 -12.1 -3.42482 | opp_overlap 611557 611554, overlap 611555 CAAGTCCATATATCA TTGCAGCTGTAGCAG TGG CTGGTGTAGCTGCAA TATTATGTTCAGTGA AM673 611370 - 612968 + | hypothetical protein TERM 300 614412 - 614393 - g 82 -10.7 -3.82603 | opp_overlap 614391 AAGCTCCAAATACAA CCCCGCA TACTTC TGCGGGG AATATTCAAAGTGGG AM675 613573 - 616785 + | hypothetical protein AM676 618480 - 617089 - | hypothetical protein TERM 301 618496 - 618460 - G 79 -8.7 -4.22883 | TATCACTGAAAATAA CACTGCAGCTACGCCAG CCA CTGCTACAGCTGCAATG ATGGGTGGACAACAT argS 620388 - 618649 - | arginyl-tRNA synthetase TERM 302 621272 - 621288 + G 76 -5.1 -4.7497 | ACGAATTTGCGCTCA GTCTAAG AAT CTTGGGC TTTTTCCTGCGTAGA recO 620653 - 621369 + | DNA repair protein RecO AM681 621444 - 622055 + | hypothetical protein AM682 622067 - 622273 + | hypothetical protein AM683 623646 - 622240 - | hypothetical protein TERM 303 622671 - 622689 + g 83 -9.6 -4.14243 | opp_overlap 622673 GCGGTGCGGCGCATA CAGTTTGG ACA CCAGACTG TTTTAAGCTAGGATG TERM 304 623587 - 623561 - G 73 -5.7 -4.46112 | opp_overlap 623561 623563 623564, overlap 623563 TCTGACTCAAAGAAA TCCCGCGCTGG GCTGT CCGGCGCGATA TTCTCGAACGCAGCA TERM 305 623564 - 623584 + g 75 -12.5 -2.52623 | opp_overlap 623563 623561, overlap 623563 623561 GACTCAAAGAAATCC CGCGCTGGG CTG TCCGGCGCG ATATTCTCGAACGCA TERM 306 623724 - 623701 - R 74 -4.5 -4.87291 | overlap 623704 TACCTCAAGCAAAAA GTAGGCCGT ACCAGG ACGACCTCC ACCCACACCGATAAT TERM 307 623765 - 623739 - R 72 -9.6 -3.39803 | overlap 623741 CACCCACACCGATAA TATACCAAACTT GGC AAGCTTGGTACA CCGTTGATATATATG TERM 308 623763 - 623741 - R 70 -10 -3.26722 | overlap 623739 CCCACACCGATAATA TACCAAACTT GGC AAGCTTGGTA CACCGTTGATATATA ileS 627243 - 623938 - | isoleucyl-tRNA synthetase TERM 309 626258 - 626228 - G 77 -9.7 -3.65351 | TCATCTTCACCGAAA CCGGGAGCAAGAT GCACT ATCCCGGTCCCGG CCCCTTCAGCCACAA TERM 310 627507 - 627495 - H 70 -9.1 -3.51032 | ATTGCCTAAGCAGAA GGCCT AGT AGGCC GAATACTTTGGTCAA AM685 627607 - 628089 + | hypothetical protein TERM 311 628139 - 628123 - gT 80 -2.9 -5.26316 | GTATTCCAGAAAAAA GCCCG TAAAGAT CAGGC TGTATCACAAAGAGG AM686 628055 - 628837 + | hypothetical protein AM688 629110 - 628841 - | hypothetical protein AM689 629256 - 632300 + | hypothetical protein TERM 312 632343 - 632308 - T 78 -3.8 -5.15634 | GAGGTTAGTAAAAAA CAGGTATGCGCCCTGG CAAC CCATGGGGAGCACCTG GAGCAAGAATGGTGC prfB 633741 - 632725 - | peptide chain release factor 2 AM694 634783 - 634031 - | hypothetical protein gatA 636631 - 635162 - | glutamyl-tRNA amidotransferase chain A TERM 313 636401 - 636391 - G 73 -3.2 -5.00616 | CCTTGGTGCAAAAAA GGTC CTT AACC CCCACCGGTATACCA TERM 314 636664 - 636648 - H 70 -4.4 -4.66264 | opp_overlap 636655, overlap 636638 CAAAACGGTCAAAAA TCCACC GGCGT GATGGA GGTTATCACACTTTG TERM 315 638132 - 638158 + G 71 -5.8 -4.3467 | GGAAAATTCTCAGCA TTGGGGATTCTG GCC CAGAGCCCACAA TTTTGGTGTGCGGGT folC 636928 - 638220 + | folylpolyglutamate synthase hemC 638378 - 639289 + | porphobilinogen deaminase TERM 316 639608 - 639620 + GF 86 -5.5 -5.252 | CCAAGAGAGTGGAAT CTCGG GAC TCGAG TTTTTTGTAGGCATA TERM 317 639810 - 639820 + GF 73 -5.4 -4.65747 | GGCAAATGGATTTTC GTTG ATG CAAC TTTTGTTGGGGCTTG murB 639264 - 640163 + | UDP-N-acetylenolpyruvoylglucosamine reductase TERM 318 641555 - 641572 + G 76 -6.9 -4.57569 | opp_overlap 641531 641527 641528 641547 TCCACAACGCAGCTG GGTACGC TAGC GCGGACC TTTTTGCGAAAATAC TERM 319 643366 - 643332 - g 84 -4.9 -5.22006 | gap 1 TGATGATAACAAAAA CAGGGGTACTGGG-CC TTCG GGTCCCGGTAGCACTG GCAGTCCATCGCAGG ankA 640456 - 644619 + | ankyrin TERM 320 644678 - 644694 + T 86 -15.1 -2.90813 | overlap 644675 GAAACTTGAATCGCC GGCGCCC AGG GGGCGCC TCATTTCCCCGGATA TERM 321 645026 - 644983 - T 75 -10.2 -3.35992 | opp_overlap 644983, overlap 644984 ACCCAGCCCAACCAA TGCCACCACCTCTGCACCGT CACT ACCCAGCAGAGGTGGTAGCC TTGGTGGCGGTGCCC TERM 322 645025 - 644984 - T 78 -13.7 -2.61274 | opp_overlap 644983, overlap 644983 CCCAGCCCAACCAAT GCCACCACCTCTGCACCGT CACT ACCCAGCAGAGGTGGTAGC CTTGGTGGCGGTGCC nuoI 645906 - 645424 - | NADH dehydrogenase subunit I TERM 323 645484 - 645496 + g 83 -5.5 -5.14682 | opp_overlap 645480 TTCCCAAACATCCCC GTTGC AGA GCAGC TTTTCTTTGTTGTAC lepB 646641 - 645922 - | signal peptidase TERM 324 646118 - 646106 - G 75 -9.1 -3.81853 | opp_overlap 646107, overlap 646104 CCCAACACGAAAATA TGCCC CTG GGGCA CTACGTAAACTGGAG AM709 647092 - 646652 - | hypothetical protein TERM 325 656851 - 656831 - g 73 -11.1 -2.95521 | overlap 656826 GTTATAGCAACCATA GCCGATGCA CTG CGCACCGGC CGGATAGACCCAGTG TERM 326 657898 - 657885 - g 79 -8.1 -4.37211 | CAAAGGGAGAAGAAA GCCAC CGTG GTGGC GCTTCAGAAACTGTT AM712 647660 - 658138 + | hypothetical protein AM715 658817 - 658530 - | hypothetical protein orfX 659770 - 659399 - | ORF X TERM 327 661090 - 661076 - H 86 -5.7 -5.08601 | GGATCTTAAGAAAAA GCTAG AAGAA CTAGC AGCGATAAGGGAAGC orfY 662843 - 663076 + | ORF Y orfX 663149 - 663547 + | ORF X typA 666701 - 664842 - | GTP-binding protein clpA 669101 - 666756 - | ATP-dependent Clp protease ATP-binding subunit terC 669205 - 669918 + | membrane protein TERM 328 670008 - 669996 - T 70 -10.5 -2.94062 | overlap 669991 TACATCAAGATCACA GCCCG CCA CGGGC CCCGGCAACGAAACA rbfA 670480 - 670127 - | ribosome-binding factor A infB 672975 - 670477 - | translation initiation factor IF-2 nusA 674538 - 672991 - | transcription elongation factor NusA acrD 678163 - 675050 - | acriflavin resistance protein D TERM 329 675518 - 675497 - G 74 -4.3 -4.82901 | CGTGGCGGATAAAAA CACCGCGGT CATC ACCACTGCG ACGTAGTAGAAGCTG tatC 679175 - 678393 - | Sec-independent protein translocase protein TERM 330 678901 - 678891 - G 89 -2.4 -5.72207 | GGGAAATGAAAAAAA CAGC GCA GCAG TTGCCCCTACTTTCA TERM 331 678944 - 678930 - G 91 -5.6 -5.4492 | opp_overlap 678930 CACATACACAAAAAA GGCTTC GGT GAGGCC TGTGTAGATCAGAGA ispG 680541 - 679273 - | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase AM742 681945 - 680569 - | hypothetical protein TERM 332 680900 - 680913 + g 91 -5.2 -5.46698 | CCATCTGATTTTCTT GCGG GAAGAG CCGC TTTTTTGCTTTTGGA TERM 333 681641 - 681625 - G 70 -11.5 -2.5001 | overlap 681611 681615 681614 681624 AGAACGGCCACTAAC GGGCCCC TCA GAGGCCC CCTTGCCCCCAGTGC dxr 683233 - 682043 - | 1-deoxy-D-xylulose 5-phosphate reductoisomerase TERM 334 682710 - 682694 - G 82 -7.2 -4.62069 | GGTCCATCGCAAAAA CGGCCC TCCAG AGGCCG TCAACGTAACCCTAG nuoN1 684692 - 683247 - | NADH dehydrogenase chain N TERM 335 683565 - 683541 - G 84 -4.3 -5.26918 | overlap 683544 AGATTTGAGAAAAAA GTATTTGGG CCAACAT CCCAAAAAC GGCGGAAACCCGGCA nuoM 686158 - 684695 - | NADH dehydrogenase chain M TERM 336 685268 - 685278 + g 71 -5.4 -4.44284 | opp_overlap 685268 685266, overlap 685271 AGCAACGGAGGAATA TGCT ATG AGCA TTTTCATATTGCGTT nuoL 688056 - 686155 - | NADH dehydrogenase chain L TERM 337 686672 - 686635 - G 71 -5.5 -4.52047 | overlap 686637 CACCACACCAGAAAA TACCGCCCCAACTGCTA GTAT CAGCAGCGGGAACAGCA TAATGCTACTGGATT nuoK 688450 - 688124 - | NADH dehydrogenase chain K nuoJ 689101 - 688499 - | NADH dehydrogenase chain J TERM 338 688917 - 688903 - G 76 -3.4 -5.08731 | CAACAAACAAGAAAA GTACGG CAA CCGCCC CTACGTACACTATGA nuoF 690582 - 689290 - | NADH dehydrogenase I subunit F TERM 339 689761 - 689775 + g 83 -5.6 -5.1485 | opp_overlap 689763, overlap 689763 ATCCCAACCACCAAT AACGCC ACC GGCGTA TTTTTCTATTAATTC TERM 340 689773 - 689763 - G 70 -8.2 -3.77722 | opp_overlap 689761 689763 CCCAACCACCAATAA CGCC ACC GGCG TATTTTTCTATTAAT TERM 341 689763 - 689773 + g 76 -8.2 -4.18115 | opp_overlap 689763, overlap 689761 CCCAACCACCAATAA CGCC ACC GGCG TATTTTTCTATTAAT fadB 691824 - 690661 - | 3-hydroxyacyl-COA dehydrogenase TERM 342 691519 - 691537 + g 77 -11 -3.40403 | GTTGTCTGGAGCCAC GGCGGAGT AAA ACTTCGCC TTCTCATCCACCCCA AM753 692270 - 691830 - | hypothetical protein TERM 343 692413 - 692391 - H 70 -3.4 -4.77438 | overlap 692396 692397 692410 ATTGATTATCAAAAA CATAACCCTA CTT TAGGAATACG CGTGGTAAAGTGCAT miaA 692470 - 693387 + | tRNA isopentenylpyrophosphate transferase AM757 694188 - 693433 - | hypothetical protein AM758 695701 - 694352 - | hypothetical protein TERM 344 695824 - 695801 - g 76 -3.1 -5.15634 | opp_overlap 695822 GAGCTTATTAAAAAA GACCCTG AGCTGTTTGA CAGGGCC ATGATATCCCGTGGC serS 695774 - 697063 + | seryl-tRNA synthetase AM760 697784 - 697239 - | hypothetical protein hemF 698942 - 698064 - | coproporphyrinogen III oxidase agk 700093 - 699113 - | acetylglutamate kinase TERM 345 699490 - 699475 - GR 70 -10.4 -2.96216 | TGGTACCACTACACA CCGGTG ATAT CACCGG AACAAAGTCTGACTC TERM 346 699884 - 699908 + gr 77 -12.9 -2.84841 | opp_overlap 699890, overlap 699881 699890 TAACACCACATCGCT CGCAAACCTCG CAG CAAGGTTTGCG TCCTTCATTGCGGTT AM764 700655 - 700038 - | GTPase EngB TERM 347 701795 - 701779 - g 73 -2.9 -4.91511 | overlap 701782 ATCCCAGCACAAAAA CAAGAGC AAG GCTCTAA AAGTTCTGAGGGCAA TERM 348 701792 - 701782 - g 76 -6.8 -4.56153 | overlap 701779 CCAGCACAAAAACAA GAGC AAG GCTC TAAAAGTTCTGAGGG prfA 700982 - 702061 + | peptide chain release factor 1 pccB 703846 - 702299 - | propionyl-COA carboxylase beta chain precursor fpg 704936 - 704127 - | formamidopyrimidine-DNA glycosylase TERM 349 704262 - 704239 - G 79 -6.6 -4.61566 | opp_overlap 704252 704253 TGGTAAACCATAAAA TGCTGCTGGA ACCC TCCCGCGGCA CCAGTGGGAATTTTA TERM 350 704930 - 704946 + g 80 -2.3 -5.46698 | overlap 704922 704941 CTGGTAGTTCTGGCA TCTTC AACGCCG GAAGA TTTTTTCCTTTTACG TERM 351 705105 - 705085 - RH 80 -9.7 -4.11394 | opp_overlap 705102 AGTTTAGTGGTAAAA CGCGTCCTT GGT AAGGACGAG CCTCAAGTTCGATTC AM773 706598 - 705141 - | hypothetical protein TERM 352 706413 - 706377 - GH 77 -9.5 -3.69702 | opp_overlap 706376 706379, overlap 706379 TATCACTGAACATAA TATTGCAGCTACACCAG CCA CTGCTACAGCTGCAATG ATATATGGACTTGCT TERM 353 706411 - 706379 - GH 80 -12.1 -3.42482 | opp_overlap 706376 706379, overlap 706377 TCACTGAACATAATA TTGCAGCTACACCAG CCA CTGCTACAGCTGCAA TGATATATGGACTTG gltX2 706535 - 708085 + | glutamyl-tRNA synthetase AM776 708090 - 708344 + | hypothetical protein TERM 354 708737 - 708706 - T 73 -9.2 -3.70853 | opp_overlap 708705 708706 CTAATCAGGTAACAA CCCCGCCAGCAAAG TAAG CGCAGCAGGCGGGG ATTTGCTTCTTCCGA AM778 710359 - 708764 - | hypothetical protein AM779 712386 - 710794 - | hypothetical protein AM780 714093 - 712414 - | hypothetical protein petC 715140 - 714379 - | cytochrome c1, heme protein precursor petB 716361 - 715141 - | cytochrome B TERM 355 715360 - 715373 + g 86 -8.1 -4.60487 | opp_overlap 715359 GACCTTGAAAATAGG GCGGT ACTT ACCGC TTTTTACAGGTGATC TERM 356 715424 - 715411 - G 76 -3.1 -5.12068 | overlap 715416 GACAGGCAACAAAAA CCACA CCGC TATGG AGCCGAACATGGTCA TERM 357 715984 - 715999 + g 74 -4.6 -4.82901 | opp_overlap 715984 715982 715986, overlap 715986 GATGCCAAAAAACCA GACCAG CTCC CTGGGC TTTTTATACGAACCA petA 716897 - 716373 - | cytochrome B6-F complex iron-sulfur subunit AM788 717982 - 717206 - | hypothetical protein znuB 719049 - 718246 - | zinc ABC transporter, permease protein TERM 358 718321 - 718297 - G 79 -7.1 -4.6709 | TAAAAGCATAGAAAA GGAGGCAACGA TAA TCATTGGCCCC GGGAATGTGTCAAAC AM790 719408 - 719055 - | hypothetical protein tsf 720305 - 719430 - | elongation factor Ts TERM 359 720077 - 720067 - G 74 -6.8 -4.37886 | overlap 720069 TTACGCGCGACAAAA TCGG TCT CCGA ACCCAGCTTCAGTAT rpsB 721324 - 720341 - | 30S ribosomal protein S2 maf 722063 - 721473 - | maf protein infA 722392 - 722057 - | translation initiation factor IF-1 AM796 723504 - 722389 - | hypothetical protein TERM 360 722900 - 722885 - GR 76 -6.8 -4.43844 | overlap 722886 CCACCACTGATAAAA CTCCCC TCTT GGGGAA CAATCTTGCCAACTA TERM 361 723362 - 723338 - GR 74 -12.1 -2.85351 | CTGCCCGAGATGACA TCACGCCCGGT CGT ACCGGGTGCGA CCAATCCACTCATAA lpdA 724885 - 723470 - | dihydrolipoamide dehydrogenase AM798 726062 - 724893 - | hypothetical protein TERM 362 725435 - 725451 + g 72 -3.7 -4.84359 | opp_overlap 725435 TGCCATCAGGCAGAA GCATG ACGATTA CATGC TTTTTGTGAGAGTAG TERM 363 725964 - 725944 - G 82 -7.5 -4.64676 | TCAGGCGCAATAAAA GACGTGGAG AGA CCCCAAGTC CGCTCAGAAACAGCT TERM 364 726094 - 726084 - H 73 -5.4 -4.69324 | ACAACAAATAATAAA GAAC CGT GTTC ATAATCTGACAACTT TERM 365 727120 - 727102 - g 86 -9 -4.59081 | GAAAGTCACAGAAAA TATGGAAA AAC TTTCCATA AAATCGGCCACGGAT engA 726383 - 727699 + | GTP-binding protein EngA yibO 729384 - 727807 - | phosphoglyceromutase TERM 366 728692 - 728704 + g 74 -7.7 -4.23054 | overlap 728676 728681 CCGCGCCAGAGCGAT GGCTT CAT AAGCC TTTTCGGTCCTGTCT TERM 367 728804 - 728815 + g 70 -2.2 -5.00616 | gap 1, opp_overlap 728804 ACAGCGTCGTTCAAA GC-CG TTA CGTGC TTTTTTGCCGAACGA TERM 368 729737 - 729761 + G 85 -3.5 -5.37593 | opp_overlap 729736 729732, overlap 729729 TATACCATAACTGAC CCGTCATTTGC CGG GCAGATAGTGG TTTTTTCCTTTCCGC TERM 369 730414 - 730401 - g 70 -3.1 -4.79223 | gap 1, overlap 730410 730411 CCATAGGAGCAAAAA CCGTCA AAA TG-CGG CACGGCCACCGGGGA carA 729593 - 730693 + | carbamoyl phosphate synthase small subunit TERM 370 730908 - 730891 - g 82 -6.9 -4.77165 | GGCTGTACAACAAAA CCACAGC GTGT GCCGCGG CTATTGCGGGGTCAT ispH 730871 - 731899 + | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase TERM 371 732510 - 732498 - g 70 -9.1 -3.52341 | AGGTGAACAGCATAA CGGCT ACC AGCCG CGGAGAGGGGGGGTT dut 732101 - 732544 + | deoxyuridine 5'triphosphate nucleotidohydrolase murF 733982 - 732591 - | UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate-D-alanyl-D-alanyl ligase TERM 372 734127 - 734117 - H 70 -8.2 -3.7108 | overlap 734118 ACTGGCACAGTTAAA GCGC GCC GCGC ACTCCCTACACGCCA TERM 373 734383 - 734408 + G 74 -4.1 -4.96848 | gap 1, opp_overlap 734372, overlap 734383 734384 734387 ACAACACCGCATCCA G-TGATCAGTGC AGT GCATTGATTAGC TTTTTCTATGCACAC AM809 734205 - 734822 + | hypothetical protein AM810 739900 - 734837 - | hypothetical protein AM811 743978 - 739863 - | hypothetical protein TERM 374 742498 - 742508 + gr 71 -6.8 -4.16943 | opp_overlap 742497 GCGGTCGCGTAACAC GTCC TGT GGAC TTTTAGCGTATAAAA TERM 375 742793 - 742809 + gr 73 -8.7 -3.727 | overlap 742787 CAGCGAGCTCGTAAG CGGCGTT TTT AACGTCG TTTACATCTGCTGGC AM812 747049 - 743990 - | hypothetical protein TERM 376 744456 - 744446 - G 74 -6.8 -4.31433 | opp_overlap 744454 CATTGGTAGAAGAAA GCGT AGC ACGC ACAAAGTGGCGATTT TERM 377 745747 - 745760 + g 74 -2.3 -5.10933 | GCGATGTGATCGTAT CACCG CTTT CGGTC TTTTGTTTTGAATCG virB6 749738 - 747102 - | VirB6 protein virB4 752139 - 749731 - | VirB4 protein TERM 378 751755 - 751776 + g 79 -7.3 -4.57073 | opp_overlap 751759 TGTATAGCTCGTTTG CAAATGACG GCTT CGTCATGTG TTTTTCGCGCCACTG virB3 752439 - 752143 - | VirB3 protein sodB 753204 - 752533 - | Fe superoxide dismutase pstA 753368 - 754753 + | phosphate ABC transporter lipA 755917 - 754976 - | lipoyl synthase AM821 758225 - 756603 - | hypothetical protein AM823 762411 - 758458 - | hypothetical protein TERM 379 759259 - 759273 + g 87 -7.8 -5.02074 | TCGGCTGACATTTCC GCGCTC CAA GAGTGC TTTTTTCCAAGCTCG TERM 380 759988 - 759977 - G 71 -5.8 -4.34402 | TCGGGTATATCAAAA GCGT TTGT ACGC TCCACGTTCCCGTGC TERM 381 760906 - 760888 - G 85 -7.4 -4.86033 | opp_overlap 760888 AAACTCGCACAAAAA GTCACACA ACC TGTGAGAC TTTAAATGCCGGAAA TERM 382 761595 - 761583 - G 85 -4.1 -5.40072 | opp_overlap 761590 CCTGGCGCAAAAAAA GCTGA TGC TCAAC GTGGGATTTGACTAG pycA 764491 - 762503 - | propionyl-CoA carboxylase alpha chain precursor sfhB 764861 - 765844 + | sfhb-like protein rpmB 766251 - 765847 - | 50S ribosomal protein L28 TERM 383 766656 - 766639 - R 83 -5.5 -5.19212 | overlap 766628 766625 AGGAGCACCAAAAAA TGGGCGC TCGG ACACCCA ACAGCATCAAAAAGC priA 768743 - 766755 - | primosomal protein N' AM829 769884 - 768961 - | hypothetical protein TERM 384 769030 - 769046 + g 84 -2.1 -5.61596 | overlap 769023 TATACCAAGGTCAAC CGCGCGG TGC TTGCCCG TTTTTTTGTCAGCAT AM830 770813 - 770010 - | hypothetical protein TERM 385 770867 - 770853 - R 76 -2.8 -5.09685 | overlap 770841 GAACATACACAAAAA TTGTGC ACG GGACAA CCCTGATGTCATTCC TERM 386 770902 - 770929 + r 72 -8.4 -3.86194 | opp_overlap 770893 770898 770909 CGCAAAGAGCACGCT CAGCATACTCAC AGTG GTGAGCAGGCTG TTTGTAGCCAAGCTT AM832 772622 - 770910 - | hypothetical protein TERM 387 771371 - 771383 + g 77 -9.1 -4.09864 | opp_overlap 771361 AAACCGCTCTTGCCA GGGCA ATA TGCCC TTTTAGCACGTCAGT TERM 388 771510 - 771523 + g 70 -3.1 -4.76088 | gap 1 ATACAGCCCCCCTTC GCGCAG TAC CTG-GC TTGTTTTTTCGTTTA AM833 773276 - 772749 - | hypothetical protein AM836 774524 - 773664 - | hypothetical protein era 775393 - 774500 - | GTP-binding protein Era TERM 389 774551 - 774580 + g 73 -2.9 -5.00884 | ATCCTGCCAGAATTT GCGCACCTT AACAAACAAAAA AAGGTGTGC TTTTTTACCCAGAAT ffh 776843 - 775488 - | signal recognition particle protein TERM 390 776433 - 776453 + g 78 -2.5 -5.30686 | CGCCGGTCTGTATAC GTCTAGG GACGCAA CCAAGAC TTTTTTCTCACTCTT nuoL3 778386 - 776836 - | putative monovalent cation/H+ antiporter subunit D TERM 391 777080 - 777090 + g 71 -6.8 -4.15044 | ATGCTGAACTCGCAT CTGC CTA GCAG TTTGTTGCGCAACGA TERM 392 777173 - 777116 - G 70 -3 -4.86822 | gap 3, opp_overlap 777121, overlap 777121 777135 AACGATATAACAAAA CATA-ACGCCGTAACAGAAATGGCCGC AATCTGA ACGGCCACGTCT-TT-CGGCGTGTATA CAAACCGCTCCCCCG TERM 393 777532 - 777519 - G 71 -5.2 -4.58085 | ACATCGACAAATAAA CGGC ATACAG GCCG CCTCTTCTGTGCTCC TERM 394 777811 - 777796 - G 73 -6.2 -4.4891 | TGGATCACCAGAAAA CATTCT CAGC AGAATG CAGGCGGCAACTTTA TERM 395 778286 - 778263 - G 74 -2.4 -5.07941 | gap 1, overlap 778264 AAAACGACAGAAAAA GCGGCATTGCA GAG TGCAAAAC-GC GTGACAGCTCGAGCC AM841 778937 - 778461 - | hypothetical protein dnaK 781101 - 779164 - | DNAK protein rne 783160 - 781301 - | ribonuclease E AM846 783581 - 783255 - | putative monovalent cation/H+ antiporter subunit C AM847 784144 - 783668 - | putative monovalent cation/H+ antiporter subunit B TERM 396 783820 - 783797 - GR 78 -3.8 -5.09173 | overlap 783800 GAACATTGCAAAAAA GTAGGAAAGA AAAC TCTTTCCGGC AATCATGGATATGGC AM848 784670 - 784101 - | putative monovalent cation/H+ antiporter subunit B AM849 784970 - 784671 - | putative monovalent cation/H+ antiporter subunit G TERM 397 784831 - 784801 - G 76 -5.4 -4.77986 | overlap 784791 784802 784803 GTAAATACGGAAAAA CCGCACTGCATGGT TAA ACCACACAGCACAA GCGCTACCCCGACGG AM851 785231 - 784977 - | putative monovalent cation/H+ antiporter subunit F tktA 787234 - 785249 - | transketolase AM853 788854 - 787250 - | hypothetical protein TERM 398 787612 - 787631 + g 70 -4.2 -4.62669 | overlap 787616 AGGCATCCGGCAACT CGCTGACT TTCA AGTCGTCG TTTATTATTTCCTTC TERM 399 789224 - 789206 - g 70 -8.1 -3.65699 | GGTAGAAAGAATGAA GGCGGAC AAGAG GTCCACC CTGCTGATTATCGGC AM854 789000 - 789710 + | hypothetical protein TERM 400 791168 - 791155 - g 86 -8.1 -4.61199 | opp_overlap 791155 ATCCCACATACAAAA CAGGC TTGA GCCTG TATATGAAACCTTAC purA 790004 - 791341 + | adenylosuccinate synthetase AM858 792331 - 791345 - | hypothetical protein AM859 792863 - 792369 - | hypothetical protein TERM 401 792583 - 792568 - G 71 -6 -4.37092 | overlap 792570 AGCTTTTGCACAAAA GAGCGG ACCA CCGCGC ACATCTCTCCCTCCA nrdA 794728 - 792908 - | ribonucleotide-diphosphate reductase subunit alpha TERM 402 793199 - 793210 + g 70 -4.4 -4.60041 | CATCTCGTAAGCGGT CTTG AAAA CAAG TTTTTCCCGCTCAGT TERM 403 794831 - 794818 - H 74 -4.5 -4.84914 | ACTCACACAACAAAA GGGAC AAAG ATCCC CGCCATCGGTAACCA ispA 795296 - 796171 + | geranyltranstransferase (farnesyl-diphosphate synthase) AM862 796220 - 797116 + | hypothetical protein thiO 798135 - 797146 - | thiamine biosynthesis oxidoreductase TERM 404 797722 - 797709 - G 70 -3.1 -4.85177 | gap 1, overlap 797710 797711 AAACCATATCAAAAA CGTGCC GCT GGCA-G CCCACCACCAACGTT TERM 405 798202 - 798192 - R 70 -4.6 -4.72986 | CATCCCGATCAAAAA GCGA GAC CCGC CACCCATTTTGCAGT dnaB 799890 - 798415 - | replicative DNA helicase TERM 406 798912 - 798891 - G 70 -3 -4.8667 | GATAGTCCACAAAAA CAACTCCA ACATTG TGAAGCTG GTGCATTCTTCTTAT AM867 800618 - 799944 - | hypothetical protein TERM 407 800408 - 800432 + g 73 -6.4 -4.57787 | gap 1, opp_overlap 800421 GCAGCAGTTTCTTTA GGGCCT-GCCA AACG TGGCCAAGCCC TTTCTTTAGTGTTCT TERM 408 801118 - 801130 + G 74 -4.7 -4.87318 | TGCGGGGGAGTAGAG CACGG CGC CCGAG TTTTTAGGTTTTGCC ssnA 800782 - 801246 + | cytosine deaminase fabH 802346 - 801378 - | 3-oxoacyl-[acyl-carrier-protein] synthase III TERM 409 801811 - 801821 + g 78 -2.4 -5.22289 | overlap 801818 AGAGTGGACATAACT CCGG CCC CAGG TTTTTCTGTTTCATC plsX 803389 - 802346 - | putative glycerol-3-phosphate acyltransferase PlsX TERM 410 802966 - 802947 - G 90 -9.3 -4.65916 | TCTAGTGCAACAAAA CTGCCCT TCCTGG AGGGCAG TACAGTAGCAATAGC rpmF 803565 - 803389 - | 50S ribosomal protein L32 TERM 411 803856 - 803871 + G 75 -10.4 -3.48276 | overlap 803862 CGTCGGTGTAATCTC CACCCC CCAT GGGGTG TTGTATACCCCAGCG tgt 803779 - 805041 + | queuine tRNA-ribosyltransferase pstB 806061 - 805237 - | phosphate ABC transporter TERM 412 805352 - 805339 - GT 73 -3.1 -5.00616 | gap 1 GCCCTCTTGAAAAAA CGCGAC CCT GTC-CG AAACTTCTCGTACCT TERM 413 805671 - 805681 + gT 74 -4 -5.03994 | overlap 805662 CATGCAGCTTAGGCC CATA AGC TATG TTTTTGTATATCGAG dapB 806843 - 806001 - | dihydrodipicolinate reductase TERM 414 806293 - 806312 + gr 80 -4.2 -5.14477 | TTACCCAGCATTAGC GATGTTCC AGAG GGCGCATC TTTTTTCGCTCTATG TERM 415 806450 - 806435 - GR 76 -6.8 -4.4891 | TGCACGACCATAAAA GCGGAA CCTT CTCCGC ATGCGTGCGAAAATC AM875 807441 - 806956 - | hypothetical protein ubiA 808353 - 807454 - | prenyltransferase TERM 416 808093 - 808105 + g 73 -9.1 -3.77209 | AAGGGGCCTGTTTTT GGTCC TCC GGACC TTTGCATCTATCTTT aaaP 809686 - 808427 - | appendage-associated protein TERM 417 808536 - 808514 - G 74 -11.2 -3.10959 | opp_overlap 808512 TAAGGCGAAGAGAGA GGAGAGGAGG GTC CCCCCCCCCC CACATTCTGTCGGGC TERM 418 809783 - 809758 - R 95 -11.9 -4.42619 | overlap 809761 809772 GAATATTTCAGAAAA CCACGCTACAC AGAC GTGTAGCGTTG CAACACAAAATTGAC TERM 419 809780 - 809761 - R 77 -12.2 -3.18044 | overlap 809758 809772 TATTTCAGAAAACCA CGCTACAC AGAC GTGTAGCG TTGCAACACAAAATT TERM 420 809831 - 809803 - R 90 -9.5 -4.5538 | opp_overlap 809806, overlap 809806 ACAAAATTGACAAAA CTAGAGGAGAGGA GGA TCCCCCCCCCTTG CATTGAGCACTACAC TERM 421 809828 - 809806 - R 70 -9.8 -3.20462 | opp_overlap 809806, overlap 809803 AAATTGACAAAACTA GAGGAGAGGA GGA TCCCCCCCCC TTGCATTGAGCACTA AM879 811124 - 809841 - | hypothetical protein TERM 422 811207 - 811182 - R 95 -11.9 -4.23045 | overlap 811185 811196 CAAGCATCCAAGAAA CCACGCTACAC AGAC GTGTAGCGTTG CAACACAAAATTGAC TERM 423 811204 - 811185 - R 77 -12.2 -3.11702 | overlap 811182 811196 GCATCCAAGAAACCA CGCTACAC AGAC GTGTAGCG TTGCAACACAAAATT TERM 424 811254 - 811230 - R 70 -9.9 -3.20462 | opp_overlap 811232, overlap 811228 811227 811232 AAATTGACAAAACTA GAGGAGAGGAG GAT CCCCCCCCCCC TTCCATTGAGCACTA TERM 425 811254 - 811232 - R 74 -11.2 -3.14989 | opp_overlap 811232, overlap 811230 811228 811227 ATTGACAAAACTAGA GGAGAGGAGG ATC CCCCCCCCCC TTCCATTGAGCACTA AM880 812109 - 811267 - | hypothetical protein rpmH 812267 - 812401 + | 50S ribosomal protein L34 AM881 812407 - 812766 + | hypothetical protein TERM 426 813011 - 813023 + G 70 -10.5 -3.00918 | opp_overlap 813009, overlap 813010 CAATAGCATTAAGTT CCGGG GGG CCCGG CTTTATAGTCTGGAT AM882 812779 - 814098 + | hypothetical protein AM884 816403 - 814157 - | hypothetical protein TERM 427 814270 - 814257 - G 71 -5.2 -4.58685 | AAACCGTTGCAAAAA GGCG TCGAAT CGCC CGCATTTCTGTTTCT pheT 819048 - 816685 - | phenylalanyl-tRNA synthetase beta chain TERM 428 817080 - 817066 - G 74 -3.5 -5.0538 | CCGCATTTCAAAAAA CCCAA TGAGG TCGGG GTGCAGCTCGCCAAC TERM 429 817875 - 817865 - G 82 -6.8 -4.82901 | overlap 817866 CTGCCCTCAGAAAAA GGTG TCT CACC ACACGCCACAACGTC rplQ 819456 - 819052 - | 50S ribosomal protein L17 rpoA 820597 - 819497 - | DNA-directed RNA polymerase subunit alpha rpsK 820992 - 820618 - | 30S ribosomal protein S11 rpsM 821373 - 821002 - | 30S ribosomal protein S13 adk 822087 - 821437 - | adenylate kinase secY 823370 - 822069 - | preprotein translocase subunit SecY TERM 430 822200 - 822187 - G 82 -3.8 -5.33848 | ACGATAATTAAAAAA CTGG TACCGC CCAG AGTGAATGAGACGGC TERM 431 822641 - 822625 - G 73 -5 -4.62069 | opp_overlap 822625 TCGCTATTGTAAAAA CGGCCG CCTGT CTGCCG TTTTGGATACTGCAC TERM 432 822781 - 822749 - G 74 -9.9 -3.56092 | CGACCAGTCCGGAAA CCTCCCCGTTTTTCC CAA GCAAAAACACGGAGG ATATGGAACTTGGTA rplO 823834 - 823394 - | 50S ribosomal protein L15 rpsE 824372 - 823848 - | 30S ribosomal protein S5 TERM 433 824337 - 824355 + g 74 -4.4 -4.83615 | opp_overlap 824338 824339, overlap 824338 824339 TGACAAATCATGAGA ATCGTGCG CAG CGCGCGGC TTTTTATCAACACTC rplR 824760 - 824383 - | 50S ribosomal protein L18 rplF 825307 - 824762 - | 50S ribosomal protein L6 rpsH 825717 - 825319 - | 30S ribosomal protein S8 TERM 434 825452 - 825430 - G 74 -7.7 -4.16279 | GAGACCATTGTAAAA CTTCGGCAG CCTAT CTGCAGAAG AATACACTCTCTTAC rpsN 825983 - 825735 - | small ribosomal protein S14 rplE 826591 - 826052 - | 50S ribosomal protein L5 rplX 826909 - 826592 - | 50S ribosomal protein L24 rplN 827265 - 826906 - | 50S ribosomal protein L14 rpsQ 827511 - 827278 - | 30S ribosomal protein S17 rpmC 827707 - 827501 - | 50S ribosomal protein L29 rplP 828131 - 827715 - | 50S ribosomal protein L16 rpsC 828775 - 828140 - | 30S ribosomal protein S3 rplV 829117 - 828779 - | 50S ribosomal protein L22 rpsS 829402 - 829121 - | 30S ribosomal protein S19 rplB 830241 - 829408 - | 50S ribosomal protein L2 rplW 830546 - 830238 - | 50S ribosomal protein L23 rplD 831147 - 830521 - | 50S ribosomal protein L4 rplC 831863 - 831165 - | 50S ribosomal protein L3 rpsJ 832182 - 831865 - | 30S ribosomal protein S10 TERM 435 831913 - 831899 - G 70 -10 -3.1978 | overlap 831897 ACTTTGACATCAACA CCAGCT GGA AGCTGG AGACTCATGAGGGCC tuf 833370 - 832189 - | elongation factor Tu TERM 436 833610 - 833600 - H 74 -2.4 -5.17353 | opp_overlap 833600 AGACTTAGCAAAAAA GGCG CCG CCCC TGTAATAGCACATAA AM915 833746 - 834531 + | hypothetical protein cmk 834518 - 835195 + | cytidylate kinase TERM 437 835499 - 835511 + G 73 -9.1 -3.66356 | GTCCGAGGGCGTGGT CTCCC TTA GGGAG TTTGAGCTTGGCGAT rpsA 835260 - 836939 + | 30S ribosomal protein S1 TERM 438 837537 - 837551 + G 80 -2.8 -5.27923 | overlap 837534 ATACAAGGAGTGGTG GACG ATTTTCA CGTC TTTTTTGTAGGCTTG sppA 836943 - 837824 + | protease IV TERM 439 837894 - 837876 - f 83 -3 -5.4505 | overlap 837877 837878 CGTCGCAAGAAAAAA TCCCTCAC TGG GTGAGGCC GTGGTTTCGCAGATC AM919 838073 - 838570 + | hypothetical protein AM920 838571 - 839008 + | hypothetical protein AM921 839324 - 840277 + | hypothetical protein TERM 440 841160 - 841138 - g 93 -14.2 -3.85864 | GGACGAGTATAATAA GGCTGCCATG GGC CATAGCAGCC CGAGAATATTATTTT hemH 840581 - 841633 + | ferrochelatase AM923 842700 - 841636 - | hypothetical protein TERM 441 841764 - 841744 - G 71 -6.1 -4.39568 | overlap 841747 AGCGAGAGAGCAAAA TATGCGCAC CCT GCGCTCATA CAGCTCATCCACCAA AM924 843282 - 842956 - | hypothetical protein hflK 844742 - 843819 - | HFLK protein AM926 845653 - 844805 - | hypothetical protein TERM 442 845371 - 845381 + g 70 -2.4 -4.99035 | overlap 845367 845371 TGGTTTCGCTTCCCT GCAC TGG GGGC TTTTTCTCTCCCTCA AM927 845751 - 848354 + | hypothetical protein TERM 443 848557 - 848526 - T 70 -10.8 -3.02511 | TGCACCGGCGCAACA CGCATCACCGCCAC ACAT GGGGCGCTGATACG CACCCGGGAAACTAC qor 849662 - 848679 - | quinone oxidoreductase AM929 852170 - 849768 - | hypothetical protein TERM 444 850026 - 850043 + g 70 -9.1 -3.52455 | overlap 850028 AGAGACACTTTCAGC GCTGCTG CGTT CAGCGGC ATTTTTCGTATTACT TERM 445 850028 - 850044 + g 78 -5.8 -4.89233 | overlap 850026 AGACACTTTCAGCGC TGCTGC GTTCA GCGGCA TTTTTCGTATTACTA TERM 446 850197 - 850211 + g 76 -3.4 -5.0916 | opp_overlap 850197 CACACTTGCAACCGA GGAGGT GCC GCCCCC TTTTTCTATTGGGCC TERM 447 852607 - 852592 - g 70 -8.2 -3.76373 | TCTTCAATAGCGAAA GCGCGG TCGG CCACGC TGCAAGGTTAATAGC folP 852504 - 853310 + | dihydropteroate synthase TERM 448 856861 - 856847 - g 73 -5.6 -4.63218 | TCTGCGGGAATAAAA GCAGTC TCG GACAGC GCAGATATCAGGAGA carB 853769 - 857077 + | carbamoyl phosphate synthase large subunit TERM 449 858158 - 858176 + T 74 -2.2 -5.06414 | opp_overlap 858159, overlap 858159 CCTTCAGCAGCAGAA CCCCGCTG AGA CGGCTGGC TTTTTCTTAGAAACC AM936 858685 - 858293 - | hypothetical protein fumC 860238 - 858850 - | fumarate hydratase TERM 450 859679 - 859691 + g 76 -5.5 -4.84527 | overlap 859677 859680 ACTGCATCCTGGAGG TGGGT GCG ACCCG TTTTTACTATGTCCG AM938 860408 - 861058 + | hypothetical protein pyrC 861059 - 862423 + | dihydroorotase glmM 863915 - 862557 - | phosphoglucosamine mutase TERM 451 863269 - 863280 + g 71 -5.8 -4.32857 | opp_overlap 863269 863268 TCAGGATGTAAAGAC CCAC AATT GTGG TTTATGTTTAGCCCA lipB 864596 - 863952 - | lipoyltransferase radC 865379 - 864687 - | DNA repair protein groES 865600 - 865884 + | co-chaperonin GroES groEL 865932 - 867581 + | chaperonin GroEL AM947 868927 - 868196 - | hypothetical protein TERM 452 870464 - 870453 - g 95 -2.2 -5.85011 | GAAAAACGAAAAAAA CGAG GCGT CTCA GCAGCGTCTTGCGGT clpB 869149 - 871767 + | ATP-dependent Clp protease ATP-binding subunit TERM 453 871930 - 871896 - T 77 -11.5 -3.37975 | gap 1, opp_overlap 871926, overlap 871897 AGCGACCATGTAGAA CGCCGGCACCCACACA ATCA TGTATGGACGCCG-CG CTGCCGATTCTGATA TERM 454 871931 - 871897 - T 70 -11.5 -2.62463 | gap 1, opp_overlap 871926, overlap 871896 GCGACCATGTAGAAC GC-CGGCACCCACACA ATCA TGTATGGACGCCGCGC TGCCGATTCTGATAT AM950 873540 - 871879 - | hypothetical protein TERM 455 871966 - 871976 + g 71 -6.8 -4.17516 | ACTTGCGTGTGCAAT CCGA GGG TCGG TTTCTCTACTTTCGG AM952 874763 - 873771 - | hypothetical protein AM953 875608 - 874868 - | hypothetical protein AM955 875813 - 876211 + | hypothetical protein TERM 456 876636 - 876619 - gf 82 -6.9 -4.788 | opp_overlap 876634 AAATCAAGGCAAAAA GCGCTAC AGTA GTCGCGC CCGGTGGTTCAGAGC pepA 876183 - 877787 + | leucyl aminopeptidase AM957 877803 - 878447 + | hypothetical protein AM959 880069 - 878594 - | hypothetical protein TERM 457 879899 - 879863 - G 77 -9.5 -3.69702 | overlap 879865 TATCACTGAACATAA TATTGCAGCTACACCAG CCA CTGCTACAGCTGCAATG ATGGGTGGACAACAT TERM 458 879897 - 879865 - G 80 -12.1 -3.42482 | overlap 879863 TCACTGAACATAATA TTGCAGCTACACCAG CCA CTGCTACAGCTGCAA TGATGGGTGGACAAC purQ 880993 - 880211 - | phosphoribosylformylglycinamidine synthase gidA 881074 - 882987 + | tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA glpX 884265 - 883300 - | fructose 1,6-bisphosphatase II TERM 459 883640 - 883623 - G 75 -9.1 -3.90318 | GCAGGACTGCAGAAA GCACACC TTCA GGTGCGC CCCCTATGCCGAGGT TERM 460 884628 - 884613 - g 73 -3.2 -5.03145 | CAAGGGCCCAAAAAA CCTTCG CCTC CTAAGG AATGTGAGTTTGACA AM965 884352 - 885053 + | hypothetical protein AM967 885213 - 885668 + | hypothetical protein AM968 885769 - 886053 + | hypothetical protein bioB 886040 - 887014 + | biotin synthase TERM 461 887413 - 887395 - f 79 -8.8 -4.1466 | overlap 887407 AGGTAAGGGTGAAAA GGTGCGGT AAG AGCGCACC GTGCTCGTGGTGACA TERM 462 889031 - 889047 + G 74 -4.4 -4.82901 | gap 1, overlap 889033 CTTCGATAACAGATT CT-GCGG CAAG CCGCTAG TTTTTGTCGGCAGCA purL 887742 - 890792 + | phosphoribosylformylglycinamidine synthase AM974 890823 - 891029 + | hypothetical protein TERM 463 891860 - 891840 - g 71 -5.3 -4.57837 | opp_overlap 891856 891857 AGATGTGGTCAAAAA GTACGGCCC GCT GAGCTGCAC CCGCACGTAGCCTCG AM975 891166 - 891870 + | hypothetical protein AM976 892141 - 891926 - | hypothetical protein AM977 892698 - 892150 - | hypothetical protein AM979 894077 - 892797 - | hypothetical protein TERM 464 892836 - 892854 + g 70 -4.5 -4.63184 | opp_overlap 892836, overlap 892838 CATGTCTTCTATAAC TCGCAGC TGCAC GCTGCCA TTTTTCAGGTACGTT TERM 465 894158 - 894207 + H 83 -8.7 -4.36914 | CCACAAACCACAGGA GCGATGTACAGGTACAAGTTTGT GGTA ATAAATTTGTGCGTGCGCGTCGC TTTTGTGCGAGCAAA AM980 894252 - 894620 + | hypothetical protein TERM 466 894809 - 894836 + F 77 -11.2 -3.38072 | opp_overlap 894804, overlap 894811 894813 TCTGAAGCTATTCTA TAGTCGCCCTGC GGTG GCGGGGCGTCTG TTGATCTTAAATCGC TERM 467 894811 - 894834 + F 76 -11.6 -3.25787 | opp_overlap 894804, overlap 894809 894813 TGAAGCTATTCTATA GTCGCCCTGC GGTG GCGGGGCGTC TGTTGATCTTAAATC TERM 468 894813 - 894832 + F 81 -12.8 -3.18768 | opp_overlap 894804, overlap 894811 894809 AAGCTATTCTATAGT CGCCCTGC GGTG GCGGGGCG TCTGTTGATCTTAAA TERM 469 894927 - 894945 + G 71 -11 -2.74501 | opp_overlap 894927, overlap 894926 894917 TGTAAGGCAGGATAA TGACGCGC AGA GCGTGTCA ATTTCCGGCATTAAT AM981 894865 - 895755 + | hypothetical protein AM982 896646 - 895993 - | hypothetical protein purM 896760 - 897815 + | phosphoribosylaminoimidazole synthetase xerC 898757 - 897807 - | integrase/recombinase ripx TERM 470 899788 - 899772 - g 71 -6.5 -4.18018 | opp_overlap 899773 899776 899778 GTGTGTGAGGCAAAA GTAGGGG TTG CCGCTAC GGAAACTCTAATTGG gpsA 898926 - 900095 + | gylcerol-3-phosphate dehydrogenase omp15 900092 - 900547 + | outer membrane protein 15 orfX 901157 - 900783 - | ORF X orfY 901468 - 901157 - | ORF Y TERM 471 901734 - 901758 + r 73 -12.2 -2.66291 | gap 1, opp_overlap 901730 901727, overlap 901726 901721 901736 GGCAGTAAGCAGGGG GACCTGGG-CG TGGG CGACCCAGGTC TCCTGTACCTGTATG rho 903234 - 901852 - | transcription termination factor Rho TERM 472 902037 - 902063 + g 71 -5.8 -4.39166 | opp_overlap 902037 ATTTAGAAATATCAA TCGCAGGGTAGA TTC TCTTGTCTGCGA TTTTCCTGTCTAGGA TERM 473 903123 - 903139 + g 90 -10.1 -4.52589 | overlap 903124 ACAGGTTCAGTACCC TCCCTCC TTC GGAGGGG TTTTCTGTGACACCA TERM 474 903124 - 903138 + g 76 -11.4 -3.31232 | overlap 903123 CAGGTTCAGTACCCT CCCTCC TTC GGAGGG GTTTTCTGTGACACC AM997 903842 - 903504 - | hypothetical protein hslV 904024 - 904593 + | ATP-dependent protease peptidase subunit hslU 904590 - 906038 + | ATP-dependent protease ATP-binding subunit ubiE 906042 - 906785 + | ubiquinone/menaquinone biosynthesis methyltransferase metS 908153 - 906786 - | methionyl-tRNA synthetase TERM 475 907106 - 907092 - G 76 -7.2 -4.34488 | CAGATTCATAACAAA TTTGAG CGC CTCAAA AAACCGGTATTCCGC lysC 908599 - 909837 + | aspartate kinase AM1006 910086 - 909871 - | hypothetical protein coxB 910094 - 910924 + | cytochrome c oxidase subunit II TERM 476 912208 - 912223 + G 70 -2.4 -4.91084 | overlap 912209 912210 AATCGCAGCGCTCTT TGCCGC ATAT GCGGGG TTTTATTATTGGATA coxA 911021 - 912586 + | cytochrome c oxidase subunit I ctaB 912596 - 913501 + | protoheme IX farnesyltransferase AM1010 914480 - 913554 - | hypothetical protein purD 914624 - 915886 + | phosphoribosylamine--glycine ligase TERM 477 916190 - 916180 - g 91 -6.8 -5.0916 | GCCCCAACAGAAAAA GCTC AGG GAGC ATAACAAGTTGTTGG yajC 915917 - 916423 + | preprotein translocase subunit glmS 916492 - 918318 + | glucosamine--fructose-6-phosphate aminotransferase TERM 478 918477 - 918451 - T 79 -8.6 -4.37092 | opp_overlap 918458, overlap 918452 AGCTCTTGGACAAAA TGCATCACCCGG GCA CCGGATGTTGCG CGACAGCGACAGTAT TERM 479 918476 - 918452 - T 79 -12.1 -3.21934 | opp_overlap 918458, overlap 918451 GCTCTTGGACAAAAT GCATCACCCGG GCA CCGGATGTTGC GCGACAGCGACAGTA dnaN 919824 - 918685 - | DNA polymerase III beta chain rnd 920659 - 920045 - | ribonuclease D czcR 921596 - 920724 - | transcriptional activator protein TERM 480 921653 - 921639 - R 76 -3.4 -5.1675 | CCAGGCACCAAAAAA CCGCCC CCT GCACGG TGCCCTAACTTCTCA AM1018 922544 - 921897 - | hypothetical protein ppa 923915 - 923388 - | inorganic phosphatase protein TERM 481 924837 - 924817 - R 79 -12.5 -3.06711 | overlap 924812 924819 TAGGCACAAAGCACA CACCCGCGG TGA CCGCGGCTG TCAAGAGTAGACATG AM1021 925203 - 924979 - | hypothetical protein rpsI 925600 - 925139 - | 30S ribosomal protein S9 rplM 926084 - 925572 - | 50S ribosomal protein L13 tolC 926120 - 927517 + | outer membrane protein AM1025 927536 - 928129 + | hypothetical protein AM1027 929288 - 928257 - | hypothetical protein TERM 482 929823 - 929835 + G 70 -4.7 -4.59773 | AGACCTGCATTCCAG CCAGG CAG CCGGG TTTTTCGAAATGCCG prsA 929392 - 930171 + | phosphoribosylpyrophosphate synthetase AM1030 930364 - 930684 + | hypothetical protein acnA 933356 - 930720 - | aconitate hydratase TERM 483 931208 - 931218 + g 95 -5.4 -5.58179 | CACCCTGCACTTCAT TGAG CAT CTCA TTTTTTATTCTGATG apaG 934196 - 933744 - | ApaG purK 934272 - 935342 + | phosphoribosylaminoimidazole carboxylase AM1037 937625 - 935472 - | hypothetical protein TERM 484 936872 - 936838 - G 73 -2.7 -5.00616 | opp_overlap 936838, overlap 936839 GGTTTGGGTAAAAAA GGCGTGGGCACGCAC TCTGT GTACACATTCACGCC TCCTTCCTTGTACGT TERM 485 938346 - 938359 + G 74 -2.3 -5.08601 | ATTGCTAGCATCCCT CAGCA TTCT TGCGG TTTTTCTTGCGGTGC TERM 486 939501 - 939471 - g 73 -9 -3.71913 | opp_overlap 939470 939469 939468, overlap 939469 TGCAGATCCAAAACA CACAACACTCGTGG CAG CCATCAGTGCTGTG ATGATTTGCAGTGCA AM1041 938242 - 939717 + | hypothetical protein AM1046 940029 - 941474 + | hypothetical protein AM1048 945434 - 941505 - | hypothetical protein TERM 487 943390 - 943404 + g 80 -4.2 -5.15634 | overlap 943385 GAGTCAGCGCGCGCA CAAGGG TCG CCGTTG TTTTTTCCTCCACTG TERM 488 944375 - 944394 + g 70 -4.2 -4.63928 | overlap 944392 TACTAATCAGATACT CAGTTCTG CTGG CAGCGCTG TTTTTGCAGTAGTCT TERM 489 944966 - 944977 + g 70 -4.4 -4.63218 | opp_overlap 944955 944958 CGAAGCATCCCAACG GTTG CATA CAAC TTTTGTTCCAGCCAC AM1050 949768 - 945638 - | hypothetical protein TERM 490 946024 - 946040 + g 87 -7.9 -5.04222 | overlap 946017 TAGTCGGAGGGTTAT GCCCGTT GGT ATCGGGC TTTTTCGTTTCATTG AM1051 955655 - 950058 - | hypothetical protein TERM 491 950574 - 950553 - G 70 -2.9 -4.86001 | overlap 950554 950561 ATGATCTGATAAAAA CGAGAGTAC AGGT GTACCCCCC GCAGCATTTACGAAC TERM 492 953663 - 953679 + g 74 -11.5 -3.14881 | overlap 953675 AAGCAACGGTATTCC CGCCCGG GTT CCGGGTG TTACTGGCACCCTTG virB4 958638 - 956209 - | VirB4 protein TERM 493 956841 - 956831 - G 82 -8.2 -4.58663 | ATTAGGCGCGAAAAA GCCC CCT GGGC CCCCCACCAAGCACG TERM 494 958738 - 958723 - R 70 -3.2 -4.8622 | opp_overlap 958723, overlap 958725 958731 958732 TCCGTGAACCAAAAA TAGGCA AACC TGCCGA TGTTCAGAAAGCCCG AM1054 959145 - 958771 - | hypothetical protein AM1055 959795 - 959418 - | hypothetical protein TERM 495 959640 - 959652 + g 71 -6.3 -4.29153 | opp_overlap 959639 GACATTACATATCAC TGTTG TGG CAACA TCTTTTTTATCATCC TERM 496 959909 - 959923 + r 80 -10 -4.03769 | GTGCACTTGGCATAT GGTGAG CAA CTCACC TTGTTTGCATTCTAT TERM 497 960508 - 960475 - R 82 -11.6 -3.66178 | opp_overlap 960498, overlap 960476 960478 TTCCGCAAGGCTAAA CCACCGCCGCCCCG GGGGTG CAGGGCGGCAGCGT GGGCGCCTGTCTACC TERM 498 960507 - 960476 - R 84 -15.1 -2.79492 | opp_overlap 960498, overlap 960475 960478 TCCGCAAGGCTAAAC CACCGCCGCCCCG GGGGTG CAGGGCGGCAGCG TGGGCGCCTGTCTAC TERM 499 960505 - 960478 - R 83 -14.1 -2.94412 | opp_overlap 960498, overlap 960476 960475 CGCAAGGCTAAACCA CCGCCGCCCCG GGGGTG CAGGGCGGCAG CGTGGGCGCCTGTCT AM1056 961172 - 960582 - | hypothetical protein AM1057 961730 - 961182 - | hypothetical protein TERM 500 961725 - 961736 + g 71 -7.2 -4.03234 | AGAACAAAAAGTCTC GGCC AACA GGCC TTTGTATGCGCGCGC AM1058 961959 - 962324 + | hypothetical protein orfY 962297 - 962566 + | ORF Y orfX 962633 - 963028 + | ORF X TERM 501 963606 - 963588 - g 83 -9.6 -4.17023 | TCAAGGACCTGAAAA TCATCGGC GAA ACCGATGA GGATGAAATGGATGT msp3 963365 - 966196 + | major surface protein 3 TERM 502 966220 - 966240 + F 100 -16.9 -5.72622 | AGATAGAAGGCTTAG GGGGAGTGC AAT GCACTCCCC TTTTTTATTTGTCCC hflK 966443 - 967555 + | hflK protein hflC 967557 - 968429 + | hflC protein TERM 503 968541 - 968526 - g 73 -5.4 -4.59773 | gap 1, opp_overlap 968529, overlap 968528 TGGCAGGGTCAAAAA CTG-CCG TTC CGGACAG CCGTAGGGGGTTTTC TERM 504 968748 - 968726 - g 71 -7.7 -4.09685 | opp_overlap 968742 GTTGACCCTTTAAAA CCCAGAAAG GTAGT CTCCCTGGG CTCGGGGTTCATAGT AM1066 968432 - 969895 + | hypothetical protein TERM 505 969896 - 969923 + G 82 -6.9 -4.76644 | opp_overlap 969893, overlap 969895 969894 969898 AACAAGAATGCATAG GCGTGGCGCCC TGTTCT GGGCGTTACTC TTTTTGCTGCATCTT TERM 506 969898 - 969921 + G 74 -8.1 -3.99327 | opp_overlap 969893, overlap 969895 969894 969896 CAAGAATGCATAGGC GTGGCGCCC TGTTCT GGGCGTTAC TCTTTTTGCTGCATC AM1067 969888 - 970502 + | hypothetical protein TERM 507 970745 - 970724 - g 87 -7.9 -4.91109 | GCTTGACCAGAAAAA GAACGGCGC TGGT GCGCGGCTC AGAAGTAGTTGAGAT TERM 508 970989 - 970979 - g 79 -6.8 -4.68593 | CTCAGGATCCAAAAA CTGC GCT GCAG GAGTGGGTACAGGGC rnc 970489 - 971187 + | ribonuclease III TERM 509 971378 - 971359 - g 82 -7 -4.79352 | GGAGGCACAACAAAA GAGGCCGC ATCT GTGGCCCC AGTGAAAAAAACGGG cox11 971218 - 971841 + | cytochrome C oxidase assembly protein AM1073 972633 - 971851 - | hypothetical protein TERM 510 972181 - 972168 - G 73 -5.9 -4.53303 | overlap 972169 CACCGGCACACAAAA CGCCG AACG CGGCA GAAAAAGTACACAGC ana29 973766 - 972972 - | hypothetical protein TERM 511 973395 - 973381 - G 85 -7.8 -4.86731 | opp_overlap 973381 973383 CCGCTCGAAACAAAA GACACG TGC CGCGTC TCATGTCTCCGTCCC TERM 512 973641 - 973627 - G 73 -11.4 -2.88249 | GACAGCCTCCACACA CGCGCT GCA AGCGCG GCAACTACTATGACC AM1077 973899 - 974120 + | hypothetical protein AM1078 975052 - 974177 - | hypothetical protein TERM 513 974531 - 974516 - G 100 -11.8 -5.01811 | GCACGAAATCAAAAA CGCCGC AACT GCGGCG AGAAATATAACACTT TERM 514 975199 - 975176 - R 87 -8.2 -4.75472 | opp_overlap 975171, overlap 975171 GGCAGAGCAACAAAA CACTTTGTTG TGCA CAACAACGTG AGCTTCTTGGAGACT AM1079 976583 - 975249 - | hypothetical protein TERM 515 976390 - 976400 + g 90 -8.2 -5.00884 | overlap 976379 CCTTCGGGGTCGTAA GCCG ACC CGGC TTTTTTGAACGCAAT AM1080 978017 - 976596 - | hypothetical protein TERM 516 976975 - 976988 + gr 72 -8.1 -3.90744 | overlap 976961 976960 TGTGAGGCAGAGACT CGCGT TGCT ACGCG TTGTTTGCGGACCAA TERM 517 977568 - 977579 + gr 71 -7.2 -4.11692 | CATCTCCATCATCAG CGGC AGGT GCCG TTTTCCCACTAACTC lspA 978492 - 977980 - | lipoprotein signal peptidase TERM 518 978278 - 978264 - GR 81 -6.4 -5.00846 | CAAACAGCACAAAAA GCATCA ATA TGACGC CCAGAGAGACATACG ribF 979482 - 978571 - | riboflavin kinase / FAD synthetase protein grxC1 979550 - 979792 + | glutaredoxin 3 hemK 980801 - 979944 - | protein-(glutamine-N5) methyltransferase map 981779 - 980982 - | methionine aminopeptidase sucB 983096 - 981783 - | dihydrolipoamide acetyltransferase component TERM 519 982930 - 982916 - G 84 -4.2 -5.29445 | overlap 982917 982918 TTTCAACAATAAAAA CCGC CTCTTCT GCGG AAACGGCATCACCAA AM1088 983516 - 983127 - | hypothetical protein panC 984645 - 983746 - | pantoate-beta-alanine ligase TERM 520 984156 - 984166 + g 71 -5.4 -4.46112 | TTTCCCCGAGGATCA TGCA ATG TGCA TTTGTTTGCATCACC AM1091 984734 - 985876 + | hypothetical protein dsbD 987092 - 985863 - | C-type cytochrome biogenesis protein TERM 521 987146 - 987128 - R 70 -11 -2.69151 | overlap 987125 CTCTGGCATACACCA CCAGCAAG TTA CTTGCCGG ACGCACATGCCGATA AM1093 987468 - 987136 - | hypothetical protein AM1094 987506 - 988609 + | hypothetical protein oma87 988615 - 990954 + | outer membrane protein AM1097 990941 - 991501 + | hypothetical protein fabZ 991507 - 991950 + | (3R)-hydroxymyristoyl-ACP dehydratase TERM 522 992807 - 992792 - g 71 -6.8 -4.15222 | AGTTTCTGTAATAAA GCACGG GAAC CCATGC GGGGTGGCAGTTTCT purH 991965 - 993506 + | phosphoribosylaminoimidazolecarboxamide formyltransferase (AICAR transformylase) pgsA 994057 - 993515 - | CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase TERM 523 994290 - 994264 - H 76 -8 -4.19506 | overlap 994266 ACTGCAAGTCTAAAA TACGCCAAATCG CCA CGAATTAGCGCA ATACCTGGCCGCTCT TERM 524 994288 - 994266 - H 70 -8.4 -3.69618 | overlap 994264 TGCAAGTCTAAAATA CGCCAAATCG CCA CGAATTAGCG CAATACCTGGCCGCT AM1103 994766 - 996070 + | hypothetical protein TERM 525 996299 - 996311 + G 79 -7.7 -4.56314 | overlap 996287 CGTTGCCTGCTGTTG CGCAT GGC ATGCG TTTTCCTTATGTTGC TERM 526 996455 - 996441 - g 76 -6.4 -4.63172 | overlap 996444 996445 GAGGAAACTACAAAA CAACGC AAC GCATTG CAAAAAAGCTGGGCA slt 996098 - 998122 + | soluble lytic murein transglycosylase precursor surf1 998815 - 998129 - | surfeit locus protein 1 TERM 527 1001011 - 1001001 - g 84 -4.6 -5.26247 | overlap 1001003 CGAAAACAAACAAAA GAGC GGT GCCC CGCGGCCAGACGCTT TERM 528 1001014 - 1001003 - g 74 -7.2 -4.22317 | overlap 1001001 AAAACAAACAAAAGA GCGG TGCC CCGC GGCCAGACGCTTCTA AM1108 999373 - 1001166 + | hypothetical protein AM1109 1002611 - 1001259 - | hypothetical protein TERM 529 1001612 - 1001631 + g 76 -2.8 -5.06585 | gap 1 AAGTTTGCACAAGTC GCGGTTGCA TGT TGCA-CAGC TTTTTCTGTAGTTTC TERM 530 1002053 - 1002075 + g 82 -7 -4.78107 | CGCGCGGCAGTTGGC CGGCAAAAGA TTT TTTTGTGCCG TTTTTAATCGTAATG atpB 1002680 - 1003483 + | F0F1 ATP synthase subunit A AM1111 1004193 - 1003567 - | hypothetical protein atpE 1004848 - 1005072 + | F0F1 ATP synthase subunit C AM1113 1005079 - 1005579 + | hypothetical protein AM1114 1005576 - 1006073 + | hypothetical protein ftsA 1007472 - 1006198 - | cell division protein FTSA trkH 1009075 - 1007504 - | potassium uptake protein TERM 531 1008027 - 1008017 - G 70 -4.6 -4.6526 | opp_overlap 1008017, overlap 1008008 1008007 AGAAACGGCTAAAAA GCCC CAG GAGC TGTAGTCGCAGTTAG TERM 532 1009347 - 1009331 - g 70 -2.2 -5.03314 | TGCAGCCCTAAAAAA GCTCAA TAGTC TAGAGC TGAGTGGTGGCTACG TERM 533 1010144 - 1010155 + G 82 -7.2 -4.61527 | GAAGGACCATAAGCC GCGG TATT CCGC TTTTTGGCCAATTTT mesJ 1009146 - 1010651 + | cell cycle protein TERM 534 1010704 - 1010727 + G 73 -11.1 -2.90615 | overlap 1010701 1010706 GGTTGATTGTATGGT CAGCAGTGA TTGCCC TCACTGCTG TGCTTTACACCCAGT TERM 535 1011706 - 1011692 - g 79 -7 -4.62069 | CGTGCACGCTAAAAA GGTGCC CAT GGCCCC GGATGTTGATGTCAG ftsH 1010664 - 1012496 + | cell division protein AM1121 1015364 - 1015158 - | hypothetical protein TERM 536 1015211 - 1015223 + Gg 80 -10.5 -3.78351 | CAGGGCTGCGCGTGG GGGCG ACT CGCCC TTTAGTGGCATTTCT secA 1012689 - 1015307 + | preprotein translocase subunit SecA AM1122 1016132 - 1015383 - | hypothetical protein czcD 1017089 - 1016136 - | cation efflux system protein ccmB 1017918 - 1017256 - | heme exporter protein B TERM 537 1017825 - 1017813 - G 73 -3.3 -4.98255 | GCGGAAGTACAAAAA GTGCG ATA CCCAC TACTACTACAAACAG dksA 1018019 - 1018432 + | dnaK suppressor protein dtbS 1019443 - 1018760 - | dethiobiotin synthase TERM 538 1019679 - 1019694 + G 76 -4.6 -5.00616 | TATCGACCGATATGG GGCGCG AGAG TGCGTC TTTTTTCACACAGAA ftsY 1019519 - 1020436 + | cell division protein icd 1020711 - 1022177 + | isocitrate dehydrogenase TERM 539 1023257 - 1023271 + G 71 -5.6 -4.58424 | opp_overlap 1023257, overlap 1023259 GGGTCGGCAACGCAA GCCTGG GAG CCAGCC TTTTGTCTAGTGATG recJ 1022302 - 1024062 + | single-stranded-DNA-specific exonuclease AM1135 1024336 - 1024037 - | hypothetical protein TERM 540 1025731 - 1025720 - g 70 -2.2 -5.00616 | overlap 1025730 GCTGTTGGCAAAAAA GCTC TTAG AAGC CCAACAGGCGGCAAG pcnB 1024527 - 1025786 + | poly (A) polymerase ndk 1026363 - 1025923 - | nucleoside diphosphate kinase TERM 541 1025958 - 1025974 + g 74 -8.1 -4.04206 | TGCTCATGATTTCGT GTTCTTT AAA AAAGAAC TTTATCTCCCACTCA TERM 542 1026426 - 1026402 - H 73 -6.4 -4.46926 | gap 1, overlap 1026417 CATGCTAGCATAAAA CGC-GCGCACT AACA AGTGCCCAGCG CGCTGCCTCAAAAAA TERM 543 1026431 - 1026473 + H 80 -3.4 -5.32396 | opp_overlap 1026442 1026444, overlap 1026432 1026434 1026442 AGTGCCCAGCGCGCT GCCTCAAAAAATCTCCGGAA GTT TCCCGGATATTTATTGATGA TTTTATTTTTAATCT TERM 544 1026462 - 1026442 - H 81 -6.1 -5.00616 | opp_overlap 1026442 1026434 1026432 1026431, overlap 1026444 CGCTGCCTCAAAAAA TCTCCGGAA GTT TCCCGGATA TTTATTGATGATTTT AM1138 1026592 - 1027155 + | hypothetical protein TERM 545 1027804 - 1027786 - g 70 -3 -4.90266 | overlap 1027788 1027791 GCCATGAAGGAAAAA CAGCAGGG TGG CACCGCTA AGGCAGCGGCGGGCG omp1 1027570 - 1028562 + | outer membrane protein 1 AM1141 1029848 - 1028745 - | hypothetical protein TERM 546 1029186 - 1029215 + Gg 80 -13.5 -2.9732 | overlap 1029184 TTCAGTGTTGACGGC GGCAGCTATGCCG TGAG CGGCAACGCTGCC TGGTTTGCATTCCCA opag3 1028727 - 1029665 + | msp2 operon associated gene 3 opag2 1029680 - 1030591 + | msp2 operon associated gene 2 opag1 1030615 - 1031007 + | msp2 operon associated gene 1 msp2 1031020 - 1032243 + | major surface protein 2 TERM 547 1032266 - 1032288 + TF 100 -19.2 -5.38054 | opp_overlap 1032261 1032260 TAGATAGAAGGCTTA GGGGGAGTGC AAT GCACTCCCCC TTTTTATTTGTCCCG AM1145 1032949 - 1032455 - | hypothetical protein AM1146 1032906 - 1033490 + | hypothetical protein TERM 548 1034108 - 1034126 + Tr 83 -9.6 -4.17023 | ACATCCATTTCATCC TCATCGGT TTC GCCGATGA TTTTCAGGTCCTTGA orfX 1034896 - 1034507 - | ORF X omp2 1039126 - 1038392 - | outer membrane protein 2 omp3 1039857 - 1039207 - | outer membrane protein 3 AM1161 1039827 - 1040150 + | hypothetical protein TERM 549 1040692 - 1040674 - g 83 -13.1 -3.50832 | opp_overlap 1040672, overlap 1040672 CTTCAAATTGAAAGA CGCCGGG AATGA CCCGGCG GGTATACTTGCCTAC TERM 550 1041106 - 1041095 - g 74 -3.6 -5.02502 | CAGAGCATACAAAAA GACC CTAA GGCC GAATTCCCAAGAAGT omp4 1040420 - 1041637 + | outer membrane protein 4 TERM 551 1041657 - 1041684 + G 79 -12 -3.18832 | opp_overlap 1041637 1041657 1041658, overlap 1041655 1041653 1041658 GCCAACCACAAAAAT TCGGGGGCAGCA GCGC TGTTGCTCCCGG TGTGTTATACAGTTG TERM 552 1041658 - 1041683 + G 77 -13.3 -2.50817 | opp_overlap 1041637 1041658 1041657, overlap 1041657 1041655 1041653 CCAACCACAAAAATT CGGGGGCAGCA GCGC TGTTGCTCCCG GTGTGTTATACAGTT AM1165 1041615 - 1041863 + | hypothetical protein TERM 553 1041959 - 1041973 + F 73 -9.2 -3.65656 | opp_overlap 1041951 GTAGAATCCCGGGCA CTGGGC TCG GCCCGG TTGTATATATGCTGG omp5 1041982 - 1043100 + | outer membrane protein 5 AM1168 1044283 - 1043468 - | hypothetical protein ccmF 1046256 - 1044334 - | cytochrome c-type biogenesis protein TERM 554 1045421 - 1045411 - G 73 -5.4 -4.74132 | AGAGCGCACTAAAAA TGTG CCG CACA AACTGGAAATAAACG TERM 555 1046933 - 1046922 - g 73 -3 -5.00616 | GGCTGGTTGAAAAAA TCAA AAAG TTGA GGGCAGTGCAGTTAG TERM 556 1047164 - 1047140 - g 70 -4.9 -4.62471 | AAGCTATACAGAAAA CAGCAGCCCAT ATT ATGGGACACCG TAGATTGCACCGCTA TERM 557 1047796 - 1047785 - g 81 -5.8 -4.99861 | GAGCAAGTACAAAAA GTGC AGTG GCAC CCGGACAGCATGCGT valS 1046615 - 1049086 + | valyl-tRNA synthetase smpB 1050431 - 1049982 - | SsrA-binding protein TERM 558 1050021 - 1050031 + g 82 -6.8 -4.85599 | ACTCTTCTCGCGCTG CCAG TCC CTGG TTTTTATAGCCTCGC ribA 1051066 - 1050434 - | 3,4-dihydroxy-2-butanone 4-phosphate synthase greA 1051609 - 1051085 - | transcription elongation factor greA TERM 559 1051126 - 1051137 + g 82 -7.2 -4.65895 | GGTAGATCTTATAGT CGCC CCTA GGCG TTTTTACCTCAACAC atpA 1053129 - 1051606 - | F0F1 ATP synthase subunit alpha atpH 1053721 - 1053149 - | ATP synthase delta chain TERM 560 1053515 - 1053528 + g 70 -2.4 -4.95302 | GCTCTTGCCCAAAGC TTGC AACACC GCAA TTTTGTTCTCTTTCG AM1179 1054548 - 1054297 - | hypothetical protein AM1180 1055790 - 1054552 - | hypothetical protein AM1181 1056539 - 1055787 - | hypothetical protein AM1183 1057770 - 1056544 - | hypothetical protein TERM 561 1056984 - 1056973 - G 78 -2.2 -5.31275 | overlap 1056976 GGCCAGGATAAAAAA CATG GCGT CACG CTCCAATTCAAGGGC AM1185 1058051 - 1059100 + | hypothetical protein AM1186 1060324 - 1059095 - | hypothetical protein TERM 562 1060590 - 1060578 - R 70 -9.1 -3.63627 | opp_overlap 1060577 GGTTCAGACCTGAAA TGCCG TGA CGGCA ATGTCTAACAAAAAA gltA 1061933 - 1060680 - | citrate synthase guaA 1063559 - 1061970 - | bifunctional GMP synthase/glutamine amidotransferase protein AM1189 1063906 - 1063676 - | hypothetical protein AM1191 1064038 - 1064433 + | hypothetical protein TERM 563 1064437 - 1064447 + F 70 -8.2 -3.7347 | opp_overlap 1064428 1064437 ACAGAATACTAGGAA CCGG CAG CCGG TTGTTACGTATTACG TERM 564 1064672 - 1064720 + F 85 -11.8 -3.71279 | gap 2, opp_overlap 1064700, overlap 1064662 1064669 TACTACGCGCTCTGC GGGTTTTCCT-GGGGCCTC-GTCT AAG AGACAGGGGCCCCGAGGACAGCAC TTCCTTTTGCATCTT TERM 565 1066054 - 1066040 - g 76 -4.2 -4.95155 | overlap 1066041 CTGACATCACAAAAA GTCTGG CTA CCAGAG CCAAAGAGAGGAAAT pdhC 1065049 - 1066350 + | branched-chain alpha-keto acid dehydrogenase subunit E2 AM1193 1066761 - 1066507 - | hypothetical protein fbaB 1066669 - 1067568 + | fructose-bisphosphate aldolase pbpA1 1069627 - 1067822 - | penicillin-binding protein secF 1070543 - 1069608 - | preprotein translocase subunit SecF TERM 566 1069966 - 1069949 - G 76 -7.7 -4.39133 | overlap 1069950 CAATAATCATCAAAA CTCCAGC CGTT GCTGGAA GACCAAACTCAATGC TERM 567 1070392 - 1070377 - G 73 -3.2 -4.99035 | overlap 1070356 1070378 TCATCCAGAGAAAAA TTGGCA ACCA TGCCAC CAGTAAAGTCAGCCC TERM 568 1070652 - 1070636 - H 71 -7.3 -4.07568 | GTTGCTCTTGCAAAA TATCGAC TGC GCCGATA TAAACTGCACGTACA AM1200 1070689 - 1071069 + | hypothetical protein hemA 1072304 - 1071072 - | 5-aminolevulinate synthase tyrS 1073718 - 1072474 - | tyrosyl-tRNA synthetase TERM 569 1072922 - 1072908 - G 86 -8.5 -4.7373 | GCAGCTCAGTAAAAA GCCGC AGTAG GCGGC CGACTTCCACATCTG glnA 1074028 - 1075434 + | glutamine synthetase TERM 570 1075458 - 1075479 + G 74 -4.3 -4.77925 | opp_overlap 1075465, overlap 1075465 CTGTGTTCAGCCCGA TAGGGAAGG TTGC CCAACCCTA TTTTTGCAGTTTTTT TERM 571 1075917 - 1075930 + G 70 -8.1 -3.75193 | overlap 1075920 1075922 1075924 TGATAGATCTGGGAT GGGCA TATA TGCCC TTTGCATATATCGTT mraY1 1075445 - 1076473 + | phospho-n-acetylmuramoyl-pentapeptide-transferase TERM 572 1077031 - 1077050 + G 71 -5.6 -4.52589 | overlap 1077033 TGCTTTGTTCTCCGC AACCTGCG AATC CGCGGGTG TTTTGTCTGAAAGCC TERM 573 1077033 - 1077048 + G 72 -8.2 -3.87627 | overlap 1077031 CTTTGTTCTCCGCAA CCTGCG AATC CGCGGG TGTTTTGTCTGAAAG TERM 574 1077360 - 1077344 - g 70 -2.9 -4.87273 | AACATCGTACAAAAA GCCACAA AAT TTGCTGC GGAATATGTAGATGC ispB 1076483 - 1077466 + | octaprenyl-diphosphate synthase AM1209 1079622 - 1077541 - | hypothetical protein mkl 1080468 - 1079749 - | ribonucleotide transport ATP-binding protein AM1212 1081252 - 1080473 - | hypothetical protein TERM 575 1081116 - 1081106 - G 74 -2.4 -5.07567 | CCACATCTCAAAAAA CTGC CTC GCTG CTATTGGGAAGTAGT rpe 1082053 - 1081271 - | ribulose-phosphate 3-epimerase polA 1084724 - 1082130 - | DNA polymerase I TERM 576 1085511 - 1085525 + H 71 -7.8 -4.08216 | TCCACTTGCTCTGTG CTGGTG TGG CGCCAG TTTTGCACGCAGTAG AM1216 1085541 - 1085927 + | hypothetical protein argF 1085950 - 1086858 + | ornithine carbamoyltransferase recF 1086868 - 1087983 + | recombination protein F omp6 1088441 - 1087980 - | outer membrane protein 6 TERM 577 1088022 - 1088036 + g 70 -8.6 -3.65425 | opp_overlap 1088022 CCCTAGCAACAAGAA CAAGGA GTT TCCTTG TTTCCAATGTCTACC TERM 578 1088036 - 1088022 - G 74 -8.6 -3.99374 | opp_overlap 1088022 CCCTAGCAACAAGAA CAAGGA GTT TCCTTG TTTCCAATGTCTACC TERM 579 1088461 - 1088444 - R 82 -12.7 -3.42078 | GAGACCTGAGCACAA CCCCTCC GATT GGAGGGG GAACGCAATCAGCAG omp7 1089671 - 1088481 - | outer membrane protein 7 omp8 1090935 - 1089736 - | outer membrane protein 8 omp9 1092210 - 1090999 - | outer membrane protein 9 omp10 1093535 - 1092273 - | outer membrane protein 10 TERM 580 1093064 - 1093050 - G 74 -8.6 -3.99374 | opp_overlap 1093050 CCCTAGCAACAAGAA CAAGGA GTT TCCTTG TTTCCAATGTCTACC TERM 581 1093050 - 1093064 + g 70 -8.6 -3.65425 | opp_overlap 1093050 CCCTAGCAACAAGAA CAAGGA GTT TCCTTG TTTCCAATGTCTACC AM1225 1094518 - 1093976 - | hypothetical protein TERM 582 1094457 - 1094441 - G 83 -3 -5.38326 | GGAATCAAACAAAAA CAACCA ACACG TGGTTA TAGCAAAAACTCCTC TERM 583 1095438 - 1095392 - g 76 -7.2 -4.38092 | gap 1, overlap 1095389 GAAGAAGTAAAAGAA GTGGCTC-CTGCTCCGGCAAC GGAAAA GCGGCCGGAAGAGAGTGCCAC AGGTGAGTATGTCCG AM1226 1094876 - 1095514 + | hypothetical protein TERM 584 1095531 - 1095574 + T 72 -9.6 -3.48668 | overlap 1095562 CGCCTTCGTTTTTCC TGGTAGCTGACGGCAACAGC GAGA GTTGTTGCGGTCGGTTGCGA TTGTGATGTGCTGGT AM1228 1096902 - 1095979 - | hypothetical protein TERM 585 1096920 - 1096942 + r 74 -2.6 -5.06414 | TTATACTTGTGTGGG TTGCGCTGGA GCA TTCTGGGCAA TTTTTATTAAGAAAA mviN 1098417 - 1097053 - | virulence factor MVIN TERM 586 1097186 - 1097173 - G 74 -2.3 -5.06414 | opp_overlap 1097173 CCCCTGGAAGAAAAA CGGTG TCAA CAGCG TTTTTGCCATACAGA TERM 587 1097313 - 1097301 - G 70 -9.1 -3.64198 | TCTTGAGATACACAA GCAGC AAA GCTGC ATAGGTCCACGAACC TERM 588 1099066 - 1099078 + G 70 -4.7 -4.63218 | CTGTGTGCGTGTGCC GCACC TCT GGGGC TTTTCTTAGGCAGGA lgt 1098643 - 1099500 + | prolipoprotein diacylglyceryl transferase AM1232 1099740 - 1099955 + | hypothetical protein rpsT 1100494 - 1100204 - | 30S ribosomal protein S20 plsC 1101338 - 1100613 - | 1-acyl-sn-glycerol-3-phosphate acyltransferase def 1101370 - 1101927 + | N-formylmethionylaminoacyl-tRNA deformylase TERM 589 1102346 - 1102321 - g 73 -11.1 -3.01924 | gap 1 GATGGGCCCGGAACA TGC-GCGCCTCC CGT GGCGGCGCTGCA AGAACAAGAAGGGTG AM1237 1102174 - 1103046 + | hypothetical protein AM1238 1103188 - 1103916 + | hypothetical protein TERM 590 1103925 - 1103964 + T 79 -13.8 -2.79796 | gap 1, opp_overlap 1103934, overlap 1103934 GGTGTAGACTATCTA TTGCAAGGAGCACCACAGA TTT TCT-TGGTGCTTCTTGCAC TGTCCTCAGCTGGGG TERM 591 1103934 - 1103955 + T 70 -8.1 -3.67112 | gap 1, opp_overlap 1103934, overlap 1103925 TATCTATTGCAAGGA GCACCACAGA TTT TCT-TGGTGC TTCTTGCACTGTCCT AM1239 1104234 - 1104007 - | hypothetical protein TERM 592 1104222 - 1104233 + g 86 -5.8 -5.15634 | CCAAAGCAGTACATG TGCG TTGC CGCA TTTTTTGGTAAAGTG AM1240 1104499 - 1104293 - | hypothetical protein AM1241 1105244 - 1104735 - | hypothetical protein TERM 593 1105312 - 1105300 - R 76 -2.7 -5.15634 | TACCCTAGGAAAAAA TAGAT TTA ATCCA TCCAAGAATTTTAGA AM1242 1106398 - 1105289 - | hypothetical protein uvrB 1108766 - 1106811 - | excinuclease ABC subunit B TERM 594 1108590 - 1108603 + g 70 -8.1 -3.76224 | opp_overlap 1108590 1108589 GTGTGCAATTATAAT CGCAG GACG CTGCG TTTGCTCAATCACCG TERM 595 1109023 - 1109045 + G 71 -6.2 -4.3255 | overlap 1109025 AAAGGAAGGCTCTAT GGCTTGAGTG ACA CACTCCAGGC TTTCTTGCTTAAGGA secD 1108831 - 1110336 + | preprotein translocase subunit SecD TERM 596 1110489 - 1110470 - f 70 -2.1 -4.96848 | overlap 1110473 1110483 GGGTGTATATAAAAA TCACTGG GAAAAA CCAGCAA TGCCCGTATTGCGGG TERM 597 1110504 - 1110483 - f 70 -4.4 -4.60889 | opp_overlap 1110490, overlap 1110473 1110470 1110491 AATCACTGGGAAAAA CCAGCAAT GCCCGT ATTGCGGG AGGGTTTTGAGTTGA AM1248 1110826 - 1112649 + | hypothetical protein TERM 598 1112902 - 1112921 + F 75 -10.8 -3.34239 | overlap 1112900 GACGTACTGATGTTG CTACTCTC AGCA GAGAGTAG TGTTGTATCACTATC orfY 1113315 - 1113548 + | ORF Y orfX 1113621 - 1114010 + | ORF X AM1254 1115559 - 1114075 - | hypothetical protein TERM 599 1114420 - 1114438 + g 79 -6.6 -4.72272 | overlap 1114421 CATGACTATCCTCCG CGCGTGCC CTG GGTACGCC TTTTTGATGGAAACC TERM 600 1114421 - 1114437 + g 72 -10.1 -3.43042 | overlap 1114420 ATGACTATCCTCCGC GCGTGCC CTG GGTACGC CTTTTTGATGGAAAC omp11 1116658 - 1115669 - | outer membrane protein 11 TERM 601 1116722 - 1116678 - R 76 -8.5 -4.20025 | opp_overlap 1116691, overlap 1116679 1116682 AACCCTCAACACAAA GCCACGCACGATAGCCCGCCA TAA CAGCGGGCTATCGTACACCAA GTATTTACTCCCGTA TERM 602 1116721 - 1116679 - R 77 -12 -3.11292 | opp_overlap 1116691, overlap 1116678 1116682 ACCCTCAACACAAAG CCACGCACGATAGCCCGCCA TAA CAGCGGGCTATCGTACACCA AGTATTTACTCCCGT TERM 603 1116718 - 1116682 - R 100 -18.1 -2.76227 | opp_overlap 1116691, overlap 1116679 1116678 CTCAACACAAAGCCA CGCACGATAGCCCGCCA TAA CAGCGGGCTATCGTACA CCAAGTATTTACTCC omp12 1117709 - 1116852 - | outer membrane protein 12 omp13 1118975 - 1117917 - | outer membrane protein 13 TERM 604 1119683 - 1119670 - g 74 -2.4 -5.18643 | CCAAGGAAAACAAAA TCCT GACTGT AGGA GTGGTAACCAAGCCG ftsZ 1119261 - 1120514 + | cell division protein FtsZ AM1264 1120891 - 1121355 + | hypothetical protein parA 1121429 - 1122244 + | chromosome partitioning protein TERM 605 1122421 - 1122433 + G 73 -10.5 -3.29461 | TTGGCTAGCTCTATC GCCCG CAA CGGGC TTATCCAGCCAATTA parB 1122241 - 1123068 + | chromosome partitioning protein rimM 1123080 - 1123652 + | 16S rRNA processing protein trmD 1123649 - 1124356 + | tRNA (guanine-N1)-methyltransferase rplS 1124349 - 1124753 + | 50S ribosomal protein L19 cinA 1125281 - 1124760 - | competence / damage-inducible protein thrS 1125347 - 1127257 + | threonyl-tRNA synthetase infC 1127287 - 1127820 + | translation initiation factor IF-3 AM1275 1128682 - 1128227 - | hypothetical protein TERM 606 1128609 - 1128595 - G 75 -9.2 -3.95153 | CCAAGGACTTAGAAA GGGCGG CCG CCACCC CACGCAGCGCGCTAA TERM 607 1128649 - 1128685 + g 74 -10.1 -3.51365 | opp_overlap 1128649, overlap 1128654 GCTGGTGATAGGAAA CAGCCTTGTCCCCTTGT TGT ACAGGGGGACACATCTG TTATCTGCGATCTCC TERM 608 1128685 - 1128649 - G 78 -10.1 -3.83026 | opp_overlap 1128649 1128654 GCTGGTGATAGGAAA CAGCCTTGTCCCCTTGT TGT ACAGGGGGACACATCTG TTATCTGCGATCTCC TERM 609 1128654 - 1128680 + g 70 -11.6 -2.53249 | opp_overlap 1128649, overlap 1128649 TGATAGGAAACAGCC TTGTCCCCTTGT TGT ACAGGGGGACAC ATCTGTTATCTGCGA AM1276 1129387 - 1128686 - | hypothetical protein asd 1130515 - 1129505 - | aspartate-semialdehyde dehydrogenase AM1278 1130825 - 1130517 - | hypothetical protein dnaZ 1132255 - 1130831 - | DNA polymerase III gamma subunit TERM 610 1131102 - 1131115 + g 95 -2.4 -6.07627 | CCGTAGCTATACGTG GTTG CACCCT CAAC TTTTTTTTTAACAGT gapB 1133445 - 1132441 - | NAD(P)-dependent glyceraldehyde 3-phosphate dehydrogenase TERM 611 1133075 - 1133091 + g 70 -2.1 -5.03314 | overlap 1133054 1133078 TCTGCATCAGCAACC GGAGCGG ATA CCACTAC TTTTTTCACCGTGCC AM1285 1133834 - 1134778 + | hypothetical protein TERM 612 1134983 - 1134969 - g 71 -7.2 -4.06361 | overlap 1134978 CCACAGAGAACCAAA CAAGAA ACA TTCTTG CTGAGTCTGCTAGAA AM1286 1134794 - 1135450 + | isoprenoid biosynthesis protein ftsW 1136632 - 1135475 - | cell division protein TERM 613 1136024 - 1136010 - G 88 -3.5 -5.60993 | gap 1, overlap 1136011 CCGGCCAGAAAAAAA GC-CGC TATC GCGAGC ATTGATAAAAAAGAT metK 1137816 - 1136614 - | S-adenosylmethionine synthetase TERM 614 1138215 - 1138195 - g 74 -8.4 -4.11216 | opp_overlap 1138194 1138193 TCGCGATCTCCAAAA GGTCAAAA GATGT TTTTGACC GCTTTGGAGTGTGGA ubiH 1138038 - 1139204 + | 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase AM1292 1139824 - 1139216 - | hypothetical protein TERM 615 1139792 - 1139759 - G 83 -3.3 -5.40464 | gap 1, overlap 1139767 GACGAGAAAGAAAAA CCTAA-CAACAATTCT GTC AAAATTGCAGATTAGG TAGGAAAGCATCATG TERM 616 1140462 - 1140450 - g 74 -7.7 -4.12456 | overlap 1140441 AGACGACTGGGAAAA CCCTA GTA TAGGG GCCTCAGGGCTTGGA glyQ 1140100 - 1140951 + | glycyl-tRNA synthetase subunit alpha glyS 1140953 - 1143037 + | glycyl-tRNA synthetase beta chain TERM 617 1143281 - 1143265 - g 74 -3.7 -4.93595 | overlap 1143267 AGAAAAATTTAAAAA GATAAGC GAA GCTTATG AGGTATTAAGCAATC dnaJ 1143119 - 1144258 + | DNAJ protein nadC 1145095 - 1144277 - | nicotinate-nucleotide pyrophosphorylase TERM 618 1145491 - 1145505 + G 74 -10 -3.51235 | opp_overlap 1145491 1145490 1145488 GAGGTAAAGGAATAG CCCCTA CTA TAGGGG TTGTGCTATCTATAA AM1298 1145154 - 1145750 + | hypothetical protein ruvC 1146239 - 1145742 - | holliday (crossover) junction endodeoxyribonuclease coxC 1147076 - 1146258 - | cytochrome C oxidase subunit III TERM 619 1146620 - 1146610 - G 73 -5.4 -4.66537 | CCCTCTAAGAGAAAA TGGT GAG ACCA TGTAACTGCAAAGCC TERM 620 1146696 - 1146717 + g 71 -5.9 -4.31164 | gap 1, overlap 1146697 ATCGACAGTTTTTAT C-CCTTTTGG CGG CCAAGAGGTG TTTATCTTCTCTGAA TERM 621 1146697 - 1146715 + g 77 -9.6 -3.75093 | overlap 1146696 TCGACAGTTTTTATC CCTTTTGG CGG CCAAGAGG TGTTTATCTTCTCTG TERM 622 1147110 - 1147096 - R 76 -7.2 -4.30576 | GTTTTAGTAGTAAAA GTAACT GGA AGTTAC AGACTAATGAGAGTA hemE 1147943 - 1147146 - | uroporphyrinogen decarboxylase AM1303 1148564 - 1149445 + | hypothetical protein TERM 623 1149468 - 1149452 - T 83 -9.3 -4.41895 | opp_overlap 1149456, overlap 1149453 AACCGGTAAGGAAAA GGCGGCC TGC GGCCGCT ATAGGGGCGCGCAGA TERM 624 1149467 - 1149453 - T 81 -12.8 -3.24414 | opp_overlap 1149456, overlap 1149452 ACCGGTAAGGAAAAG GCGGCC TGC GGCCGC TATAGGGGCGCGCAG AM1304 1149950 - 1149432 - | hypothetical protein TERM 625 1149477 - 1149496 + g 71 -5.6 -4.45259 | overlap 1149456 GGCCGCTATAGGGGC GCGCAGAG CTTT CACTGTGC TTATTTTTGCCATTT TERM 626 1149764 - 1149782 + g 73 -3 -4.94487 | opp_overlap 1149760 GGTCCTTAACACTAT GTTGCCAT AGT AGGGCCAC TTTTCTCTTTTGTAG AM1305 1151130 - 1149934 - | hypothetical protein TERM 627 1149977 - 1149992 + g 87 -4.6 -5.37593 | opp_overlap 1149955, overlap 1149979 CCCTCGATCGGGGGC AAGCCG AAAG CGGCTC TTTTTTCGTTTACGG TERM 628 1149979 - 1149990 + g 76 -7.2 -4.31698 | overlap 1149977 CTCGATCGGGGGCAA GCCG AAAG CGGC TCTTTTTTCGTTTAC TERM 629 1150278 - 1150259 - G 71 -6.3 -4.4261 | GGGGGAACACCAAAA GCCAGGG CGATCT CCCGGGC GGAAACATTTTTCGA TERM 630 1151554 - 1151567 + G 80 -4.5 -5.13473 | opp_overlap 1151553 GACATGGAAAACATG CCGTT CCCC GACGG TTTTTTCGATGTGGT AM1306 1151233 - 1152033 + | hypothetical protein nadA 1152053 - 1153009 + | quinolinate synthetase fdxA 1153402 - 1153031 - | ferredoxin II ilvC 1153528 - 1154499 + | ketol-acid reductoisomerase infC 1154783 - 1154526 - | translation initiation factor IF-3 TERM 631 1154818 - 1154800 - R 82 -8.1 -4.48823 | gap 1, opp_overlap 1154810 1154812 AAGCAATCCAGAAAA GCGTGCCG CTTA CGGC-CGC TATGGCCATATTACA virD4 1157377 - 1154957 - | VirD4 protein virB11 1158438 - 1157425 - | VirB11 protein TERM 632 1158047 - 1158062 + g 80 -4.6 -5.19212 | CCCTGCTGGGCCACA TGGGAG AACG CACCCA TTTTTTCATAATCAT virB10 1159817 - 1158480 - | VirB10 protein TERM 633 1159252 - 1159262 + g 70 -2.4 -5.05601 | opp_overlap 1159252 CCCAGGACGATCATA GGCG TAC CGCG TTTTTCTCTATCGTA virB9 1160664 - 1159825 - | VirB9 protein TERM 634 1160254 - 1160236 - G 71 -10.2 -3.12999 | GTAGGCCATATCCAA CAGGGGGG AGT CCACCCTG CCGAGCTCATCCGCC virB8 1161340 - 1160651 - | VirB8 protein ribA 1162592 - 1161459 - | GTP cyclohydrolase II TERM 635 1162468 - 1162480 + g 75 -10.5 -3.48276 | opp_overlap 1162467 1162466 TTGTGGAGGATAACC GGCGC GCA GCGCC TTATCTCCAACACCG AM1319 1163950 - 1162709 - | hypothetical protein TERM 636 1163885 - 1163870 - GR 76 -3.2 -5.1287 | gap 1, opp_overlap 1163870 TCCACACCCAAAAAA CCG-CGA ACG CCGTCGG TAAGTTCTAAGACAA AM1320 1164419 - 1163892 - | hypothetical protein dapF 1165313 - 1164480 - | diaminopimelate epimerase AM1324 1166041 - 1165325 - | hypothetical protein AM1325 1166611 - 1166183 - | hypothetical protein TERM 637 1166801 - 1166817 + H 70 -9.3 -3.63305 | overlap 1166803 GCTTTGGGGCTAGAT GCGCCGC TGC GCGGGGC TTTGCGGCTTCTATA TERM 638 1167438 - 1167454 + G 70 -9.5 -3.19192 | opp_overlap 1167436 AGGAGAAGAACGATC CTGCTTT TGC AAAGCAG TTGGCTTCCATGGCA TERM 639 1167991 - 1168001 + G 82 -8.2 -4.56597 | overlap 1167990 CGTGTTCTGGAACGG CCCC ATG GGGG TTTTTGAGCGCGCGG pgk 1167047 - 1168204 + | phosphoglycerate kinase xseA 1169589 - 1168396 - | exodeoxyribonuclease large subunit AM1328 1170232 - 1169564 - | hypothetical protein TERM 640 1170934 - 1170954 + G 70 -9 -3.61517 | opp_overlap 1170933 1170934 1170936 GGGGCGTGCTAGAAC CAGTCGGT AACAG GCCGACTG TTATTGAGGACGGGT dapD 1170411 - 1171247 + | 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase TERM 641 1171425 - 1171415 - g 70 -2.4 -4.91109 | CCTGTATGACAAAAA GCGG CAG CCGA TAGACCAAGCTGTAG trmE 1171248 - 1172579 + | tRNA modification GTPase TrmE dfp 1173293 - 1172736 - | phosphopantothenoylcysteine decarboxylase TERM 642 1172847 - 1172859 + g 70 -10.5 -2.97747 | opp_overlap 1172846 CCCGCACGCCAATAT GCCGG TCT CCGGC TCTATGATCTGCACA TERM 643 1174446 - 1174418 - g 78 -2.3 -5.31275 | TGGTAGCACAAAAAA CAAACAGCTGCTC AAA GATAGGCTGCTTG CCGGGGATATATGCA TERM 644 1174980 - 1174960 - g 74 -3.9 -4.96848 | opp_overlap 1174963 1174964 1174969, overlap 1174962 1174963 CCGGGGACATAAAAA TACTCGTGG CAA CCACGGTTA TCGAGGTAGGTATTG recG 1173303 - 1175402 + | ATP-dependent DNA helicase AM1337 1175585 - 1176565 + | hypothetical protein purF 1178109 - 1176700 - | amidophosphoribosyltransferase TERM 645 1177248 - 1177288 + g 82 -7.6 -4.67353 | gap 1, overlap 1177250 CCACCATATCTACAT TGTCGGGAGGAGGGCTTTC TACT GCAAGCTCTGC-CCCGATA TTTTTACGTGCCTCA TERM 646 1177250 - 1177286 + g 72 -8 -3.95214 | gap 1, overlap 1177248 ACCATATCTACATTG TCGGGAGGAGGGCTTTC TACT GCAAGCTCTGC-CCCGA TATTTTTACGTGCCT pth 1178820 - 1178260 - | peptidyl-tRNA hydrolase rplY 1179481 - 1178825 - | 50S ribosomal protein L25/general stress protein Ctc AM1341 1179741 - 1179523 - | hypothetical protein TERM 647 1179667 - 1179643 - G 70 -10 -3.21276 | overlap 1179641 1179644 TCTGGCCCTACAACA CGCAGCAACC GTAAG GGTTGCTGCC AATACCATCCTTGCC TERM 648 1179666 - 1179644 - G 77 -13.5 -2.52623 | overlap 1179643 1179641 CTGGCCCTACAACAC GCAGCAACC GTAAG GGTTGCTGC CAATACCATCCTTGC TERM 649 1183038 - 1183059 + r 71 -10.3 -3.16055 | CCGCTGGTACGGGTG CTGAGAAAT TTTT ATTTCTCAG TTGCTAAGACCTTTA AM1346 1184004 - 1183255 - | hypothetical protein dapE 1185145 - 1183943 - | succinyl-diaminopimelate desuccinylase kefB 1187006 - 1185315 - | glutathione-regulated potassium-efflux system protein TERM 650 1186455 - 1186424 - G 79 -5 -4.96848 | gap 1, overlap 1186425 1186427 TTCCTGATATAAAAA TCAGCGCAAGTGCCG CCA CGGC-CTTGAGCAGC GCATGCATTAGCGAC TERM 651 1186452 - 1186427 - G 72 -9.7 -3.35962 | gap 1, overlap 1186425 1186424 CTGATATAAAAATCA GCGCAAGTGCCG CCA CGGC-CTTGAGC AGCGCATGCATTAGC AM1349 1187583 - 1187020 - | hypothetical protein TERM 652 1187058 - 1187076 + g 70 -8.8 -3.63968 | opp_overlap 1187048 1187057 AGCAACCGATACTAG GTACCTGG TCA CCCGGTAC TTTGCCAGTTTCCGC TERM 653 1187398 - 1187415 + g 91 -11.3 -4.37658 | opp_overlap 1187396 CGCCATCAGCAACTT CACCTCG CGCA CGAGGTG TTTTATCAAGGCCTT TERM 654 1187557 - 1187534 - G 71 -6.6 -4.13767 | overlap 1187537 GCTTTGAGCCGAAAA TCACGCGCGG TAAA CCCCGCGTCA AGCGTAGGAGTAACT TERM 655 1187695 - 1187681 - R 79 -11.4 -3.55203 | opp_overlap 1187672, overlap 1187671 1187670 1187672 AAAATGCGGCTGAAA GCAGCC CTT GGCTGC AAAATTCAAACCACC AM1350 1188257 - 1187811 - | hypothetical protein pdhB 1189413 - 1188388 - | pyruvate dehydrogenase subunit beta TERM 656 1189175 - 1189163 - G 70 -9.1 -3.54638 | overlap 1189153 1189171 1189172 ACAATCGGCTTTAAA CCGCA AAA TGCGG CCCCTACCGCGATGC AM1352 1192339 - 1189478 - | hypothetical protein TERM 657 1190255 - 1190265 + g 74 -2.4 -5.08824 | overlap 1190251 CTGTGCTAAATCCGT GACG CTG CGGC TTTTTTCAGTCAGAG TERM 658 1191280 - 1191304 + g 70 -11.5 -2.50492 | opp_overlap 1191279, overlap 1191279 TGCGTGATACAAATT GCTGCATTTGG AGG TCGAATGCAGC CTGTTGATGCTCGTC tldD 1192852 - 1194273 + | tldD protein AM1354 1194593 - 1194357 - | hypothetical protein AM1355 1195797 - 1194703 - | translation-associated GTPase TERM 659 1195265 - 1195277 + g 77 -10.5 -3.60818 | overlap 1195275 CCAATAGCGCTCCTT GCGGG CTG CCCGC TTTCAAGCGTTTTGA ispF 1196568 - 1195978 - | 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthetase ispD 1197306 - 1196596 - | 2-C-methyl-D-erythritol 4-phosphate cytidyltransferase