TransTermHP v2.07 (built on Jan 21 2009) 25 bins; sample size is 20000000 --pval-conf=/fs/szasmg2/carlk/TTupdate2/expterm.dat --gc=-2.3 --au=-0.9 --gu=1.3 --mm=3.5 --gap=6 --max-len=59 --min-stem=4 --max-loop=13 --min-loop=3 --uwin-length=6 --uwin-require=3 --max-hp-score=-2 --max-tail-score=-2.5 --loop-penalty=1,2,3,4,5,6,7,8,9,10,11 --start-cut=0 --end-cut=25 Genes: 0.504822 %AT, 1948997 nt, 10114 terms. Intergenic: 0.593619 %AT, H2T: 285997 nt, 870 terms; T2T: 84565 nt, 606 terms; H2H: 127078 nt, 775 terms. Each terminator entry starts in column 3 and is of the form: term # start - end +/- regionconf hp tail | notes Followed by the sequence of the 5' tail, 5' stem, loop, 3' stem, and 3' tail. Genes are interspersed, and start the first column. SEQUENCE gi|11497621|ref|NC_000917.1| Archaeoglobus fulgidus DSM 4304, complete genome (length 2178400) AF0001 786 - 406 - | hypothetical protein TERM 1 2518 - 2502 - R 74 -9.3 -3.54408 | TGGGATTGAAAGTAA GCGTCGC TGG GCGTCGC TCGGTGGTGGAACGG AF0002 3749 - 3222 - | hypothetical protein AF0003 4290 - 4784 + | hypothetical protein TERM 2 5705 - 5740 + G 70 -9 -3.61894 | opp_overlap 5711, overlap 5706 5711 CTTCAGAGGCTTGCT ATAGCAGCCTGCATCC TCAG GGATGCAGACTTCTAC TTCTTCGACGAGGTT TERM 3 5706 - 5739 + G 77 -12.5 -2.76815 | opp_overlap 5711, overlap 5705 5711 TTCAGAGGCTTGCTA TAGCAGCCTGCATCC TCAG GGATGCAGACTTCTA CTTCTTCGACGAGGT TERM 4 5711 - 5734 + G 79 -11 -3.61089 | opp_overlap 5711, overlap 5706 5705 AGGCTTGCTATAGCA GCCTGCATCC TCAG GGATGCAGAC TTCTACTTCTTCGAC TERM 5 5734 - 5711 - g 78 -13.2 -2.62263 | opp_overlap 5706 5705 5711 AGGCTTGCTATAGCA GCCTGCATCC TCAG GGATGCAGAC TTCTACTTCTTCGAC AF0004 5051 - 6811 + | putative ATPase RIL AF0005 6850 - 7443 + | hypothetical protein mtaC-1 7548 - 8180 + | corrinoid methyltransferase protein (mtaC-1) AF0007 8181 - 9434 + | hypothetical protein TERM 6 9925 - 9949 + GF 73 -7.8 -3.9398 | CCGGGAAAAGCTTAC GGTATCGCCC TCTTC GGGCAGTACC TTTCTCCAGTTCTCA oxlT-1 9508 - 10770 + | oxalate/formate antiporter (oxlT-1) TERM 7 10958 - 10938 - gf 85 -8.3 -4.42653 | opp_overlap 10938 10941, overlap 10941 ATCTGAGCGACAAAA CAGGCAATC CGG GATTGCTTG ATGTTGTGGGGATGA TERM 8 10938 - 10958 + GF 72 -10.5 -2.53271 | opp_overlap 10938 10941, overlap 10941 ATCTGAGCGACAAAA CAGGCAATC CGG GATTGCTTG ATGTTGTGGGGATGA TERM 9 10941 - 10955 + GF 70 -8.6 -3.41745 | opp_overlap 10941 10938, overlap 10938 TGAGCGACAAAACAG GCAATC CGG GATTGC TTGATGTTGTGGGGA mtr 10739 - 11611 + | tetrahydromethanopterin S-methyltransferase subunit H TERM 10 13240 - 13202 - g 71 -6.8 -4.15106 | gap 1, overlap 13233 CATTAACGTCGAAAA TGCGAAGGT-CATCGGG TTGCTG CCCGACATACCTTCGGA GAAGATAACCTTCGC AF0010 11613 - 13406 + | hypothetical protein mtaC-2 13406 - 14125 + | corrinoid methyltransferase protein (mtaC-2) AF0012 14126 - 15376 + | hypothetical protein exuT 15396 - 16595 + | hexuronate transporter (exuT) AF0014 16691 - 17104 + | hypothetical protein putP-1 17106 - 18581 + | proline permease (putP-1) AF0016 18636 - 19283 + | hypothetical protein hbd-1 19287 - 21272 + | 3-hydroxyacyl-CoA dehydrogenase (hbd-1) acaB-1 21295 - 22470 + | 3-ketoacyl-CoA thiolase (acaB-1) AF0019 22475 - 22957 + | hypothetical protein caiB-1 22960 - 24222 + | L-carnitine dehydratase (caiB-1) AF0021 24261 - 25232 + | signal-transducing histidine kinase AF0022 25496 - 25221 - | hypothetical protein aor-1 27281 - 25503 - | aldehyde ferredoxin oxidoreductase (aor-1) AF0024 28534 - 27284 - | alcohol dehydrogenase, iron-containing TERM 11 28200 - 28212 + g 82 -4.1 -5.24129 | ACAATCAAGTCGGGC TGGAG GGC TTCCA TTTTTTCTGCAGCGG cynX 29720 - 28539 - | cyanate transport protein (cynX) AF0026 30082 - 30732 + | hypothetical protein AF0027 30788 - 31096 + | hypothetical protein AF0028 32206 - 31091 - | Sep-tRNA:Cys-tRNA synthetase TERM 12 31471 - 31490 + g 81 -5.7 -5.01535 | CCCTTGCGGTGCAGC CGAGGAG CTCAAC CTCCTTG TTTTTGTACTTCTCG AF0029 32582 - 32238 - | hypothetical protein TERM 13 32427 - 32441 + g 70 -10 -3.19175 | opp_overlap 32417 32418 TACAACCTCCGGCCT GAGGTC AAA GACCTC TTCAATGTCTTCCAG TERM 14 32594 - 32606 + H 80 -7.7 -4.34737 | overlap 32603 CCATGAGATAAGGTT TTCCG TTA CGGAA TTTCTTCCTTACTCC TERM 15 33038 - 33027 - g 70 -2.2 -5.04175 | opp_overlap 33031 GCAACCAGATAAAAA TAGC TCTT GCCA AGATTTTCGGAATTT AF0030 32924 - 33073 + | hypothetical protein AF0031 33137 - 34156 + | hypothetical protein AF0032 34857 - 34153 - | hypothetical protein TERM 16 35617 - 35603 - gH 70 -4.2 -4.65895 | overlap 35607 CTCCTGACCCAAAAA GCTATC AGG GATTGC TGAAGGCAGTTGGGG acaA-1 34894 - 36297 + | acyl carrier protein synthase (acaA-1) TERM 17 36487 - 36505 + GT 95 -13.2 -3.61398 | opp_overlap 36485 36484 36477 AATAAGCGGAAACGT CTTCAGCG ACA CGCTGAAG TTCTTCGGCAAGCCG acaB-2 36200 - 37453 + | acetyl-CoA acetyltransferase AF0035 38349 - 37450 - | mannosephosphate isomerase, putative pcm-1 38739 - 39389 + | L-isoaspartyl protein carboxyl methyltransferase (pcm-1) TERM 18 39436 - 39454 + GF 86 -5.2 -5.30155 | opp_overlap 39422, overlap 39439 39440 GGAGACGTAGACGTG CTCAGAAG GAA CCTCTGGG TTTTTTCCTTCGTCG cobS-1 39244 - 40041 + | cobalamin (5'-phosphate) synthase (cobS-1) TERM 19 40492 - 40506 + GF 73 -5.6 -4.56775 | TACTGGTACGAGTAC CTTGGC AAA GCCGGG TTTTTCGGAAAGGCT TERM 20 40735 - 40716 - gf 82 -6.4 -4.93318 | overlap 40718 CATAAGGGAGAAAAA CCTCGAAC TCCT GTTCGATG CGATGAAACTCCTCC AF0038 40111 - 41196 + | hypothetical protein TERM 21 42046 - 42034 - gf 70 -7.7 -3.63922 | opp_overlap 42043, overlap 42032 42042 42043 AGCTTTCGGAAAATA CTCCA CAA TGGAG AAACTCCTGTTTTTC AF0039 41153 - 42262 + | dolichol-P-glucose synthetase, putative TERM 22 42431 - 42447 + G 71 -5.1 -4.45945 | overlap 42433 GAGGCGATCGTTCTG GAGGG CTACCGC CCCTC TTTTGATTACTACAT AF0040 42263 - 44044 + | hypothetical protein rfbB-1 44806 - 44093 - | polysaccharide ABC transporter, ATP-binding protein (rfbB-1) rfbA-1 45567 - 44803 - | polysaccharide ABC transporter, permease protein (rfbA-1) TERM 23 45467 - 45452 - G 95 -6.1 -5.45652 | overlap 45462 AGTGCCAATAAAAAA GGAGC TAAGAG GCTCC AAATCAAACCTAGAG wbaZ-1 45631 - 46722 + | first mannosyl transferase (wbaZ-1) TERM 24 46868 - 46849 - g 70 -8.5 -3.8062 | GAATTGTGAGAAGAA GGGCGGA TTGGTC CCCGCCC CAAAATCTCATAAAC gmd-1 46731 - 47969 + | GDP-D-mannose dehydratase (gmd-1) mtfA 47966 - 51607 + | mannosyltransferase A (mtfA) AF0046 53031 - 51610 - | hypothetical protein TERM 25 51755 - 51767 + g 76 -6.3 -4.72846 | opp_overlap 51742, overlap 51742 AATTCTTCGCACTCT TCGAA GAA TTCGA TTTTTACGTCTCTAA TERM 26 52287 - 52301 + g 70 -4.2 -4.66537 | opp_overlap 52277, overlap 52289 AATCAGAAGTGTGAA TGTCGG TCC CCGAAA TTTTCTCTTCAGCGG TERM 27 52464 - 52478 + g 70 -4.2 -4.66537 | TGAACTCATCTTTTC TTACGG TCC CCGAAA TTTTCTCTTCAACGG TERM 28 52509 - 52519 + g 70 -3.2 -4.90266 | TGTTCAATTTACCCT CGAT CGC GTCG TTTTTGCTTGATAGC AF0047 53358 - 53792 + | hypothetical protein AF0048 55483 - 54242 - | hypothetical protein AF0049 56764 - 55526 - | hypothetical protein TERM 29 57321 - 57350 + G 74 -6.6 -4.34345 | gap 2, opp_overlap 57315, overlap 57324 GAGTGGAAACGTTGC CCT-TGCC-AACGA CACG TCGTTCGGCATAGG TTTTGCTCCTCTCTC AF0050 56863 - 58062 + | S-adenosylmethionine synthetase dapE-1 59158 - 58049 - | succinyl-diaminopimelate desuccinylase (dapE-1) TERM 30 59232 - 59218 - H 81 -7.2 -4.62069 | opp_overlap 59218 TTTTGATTCCAAAAA CTATCA TAA TGATAG TGAATTACATGATTT AF0052 59291 - 59767 + | hypothetical protein AF0053 60467 - 59760 - | hypothetical protein AF0054 60769 - 60485 - | hypothetical protein AF0055 61170 - 60772 - | hypothetical protein AF0056 61331 - 61191 - | hypothetical protein rpl37ae 61586 - 61335 - | 50S ribosomal protein L37Ae AF0058 62149 - 61625 - | hypothetical protein AF0059 62520 - 62116 - | hypothetical protein AF0060 62618 - 62899 + | hypothetical protein TERM 31 62910 - 62885 - f 73 -7.5 -4.05991 | overlap 62886 AATATATACGATAAA GGCGAGGAGCA GTAA TGCTCATCGCT GTCGAGGGCATTGAC TERM 32 62909 - 62886 - f 78 -11 -3.0251 | overlap 62885 ATATATACGATAAAG GCGAGGAGCA GTAA TGCTCATCGC TGTCGAGGGCATTGA TERM 33 63057 - 63039 - g 74 -2.5 -5.20328 | gap 1 CGGGAAAAAAATAAA GAGT-TCT GAGG AGAGACTC TCGCCCGAGGAGGAG tmk 62899 - 63489 + | thymidylate kinase (tmk) AF0062 64353 - 63463 - | hypothetical protein AF0063 64591 - 64406 - | hypothetical protein AF0065 65488 - 65075 - | hypothetical protein AF0064 64619 - 65281 + | hypothetical protein AF0066 65673 - 65485 - | hypothetical protein AF0067 66485 - 65799 - | hypothetical protein AF0068 67450 - 66497 - | hypothetical protein AF0069 67813 - 67451 - | hypothetical protein AF0070 68861 - 67800 - | hypothetical protein AF0071 71109 - 68830 - | ATP-dependent RNA helicase, putative AF0072 71991 - 71266 - | hypothetical protein TERM 34 72067 - 72055 - R 86 -9.1 -4.41047 | opp_overlap 72055 AGTTGTGAATGAAAA CCACC GGC GGTGG TGTATCTGAAAAGAG AF0073 73134 - 73048 - | hypothetical protein birA 73396 - 74295 + | biotin operon repressor/biotin--[acetyl CoA carboxylase] ligase (birA) AF0075 74322 - 75563 + | hypothetical protein AF0076 75544 - 75954 + | iron-sulfur cluster binding protein aor-2 75951 - 77687 + | aldehyde ferredoxin oxidoreductase (aor-2) AF0078 78424 - 77684 - | hypothetical protein TERM 35 78244 - 78258 + g 73 -5.7 -4.4891 | TTGTGCAGTTTTGGA GTCTC TCAGC GAGAC TTTTCTGCTGCTCAA AF0079 78494 - 79789 + | hypothetical protein argD-1 79817 - 80944 + | acetylornithine aminotransferase (argD-1) AF0081 81637 - 81167 - | hypothetical protein AF0082 81853 - 82701 + | hypothetical protein AF0083 82895 - 82710 - | hypothetical protein AF0084 83322 - 82867 - | hypothetical protein AF0085 83298 - 83723 + | hypothetical protein nrtB-1 84414 - 83680 - | nitrate ABC transporter, permease protein (nrtB-1) nrtC-1 85109 - 84378 - | nitrate ABC transporter, ATP-binding protein (nrtC-1) AF0088 86008 - 85106 - | thiamine biosynthesis protein, putative TERM 36 86238 - 86252 + H 70 -7.8 -3.64703 | overlap 86221 86217 CCGCCACAGCGGGTG GGGGGA CTT TCCTCC TTTCGGTCAGCCGCC TERM 37 86947 - 86965 + G 71 -7.4 -4.08485 | AACTGGAATGCCGAA GGGTGTGA TGC TCACACAC TTTAATTTAGCTGCA fadD-1 86366 - 87994 + | long-chain-fatty-acid--CoA ligase (fadD-1) AF0090 88042 - 88923 + | dehydrase hpcE-1 88920 - 89894 + | 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase (hpcE-1) cysA 90613 - 89891 - | sulfate ABC transporter, ATP-binding protein (cysA) cysT 91376 - 90591 - | sulfate ABC transporter, permease protein (cysT) TERM 38 90665 - 90650 - G 72 -4 -4.87786 | gap 1, overlap 90658 TTAAGGCCACAAAAA CTGC-CA AAC TGAGCAG TATCAGGATTGCTGC AF0094 92401 - 91373 - | hypothetical protein TERM 39 92609 - 92575 - R 93 -9.4 -4.91573 | opp_overlap 92575 AAAATATATTAAAAA TTCGATTAATTCCGAA TTG TTCGGAGCCAACCGAA TTGTTCAGAAAGTCC TERM 40 92687 - 92669 - R 82 -6 -4.8622 | TTTTGTAATTAAAAA TTCGACTT TAA ATGTCGAA TAAATCAATAATCGA AF0095 93354 - 93028 - | hypothetical protein AF0096 93679 - 93365 - | hypothetical protein AF0097 94277 - 93981 - | hypothetical protein AF0098 94650 - 94327 - | hypothetical protein AF0099 95396 - 94932 - | hypothetical protein AF0100 95668 - 95387 - | hypothetical protein TERM 41 95928 - 95918 - R 71 -6.8 -4.07568 | GGCGCTCTGTGAAAA GCAG TTG CTGC GAGAGAGGACATGTG AF0101 96943 - 96293 - | hypothetical protein AF0102 97513 - 96947 - | hypothetical protein AF0103 97623 - 98192 + | hypothetical protein AF0104 98619 - 98203 - | hypothetical protein AF0105 98927 - 98616 - | hypothetical protein pyrB 99044 - 99943 + | aspartate carbamoyltransferase, catalytic subunit (pyrB) pyrI 99940 - 100401 + | aspartate carbamoyltransferase regulatory subunit AF0108 101195 - 100398 - | fructose-bisphosphate aldolase AF0109 101543 - 101220 - | hypothetical protein AF0110 101591 - 103195 + | O-phosphoseryl-tRNA synthetase TERM 42 103227 - 103212 - T 76 -3.3 -5.3167 | CAAAAACAAAGAAAA GGAAA TTTAAG TTTCC ACCTGCTCGGGCGCG AF0111 104117 - 103218 - | hypothetical protein AF0112 104994 - 104233 - | Sir2 family transcriptional regulator purP 106125 - 105046 - | 5-formaminoimidazole-4-carboxamide-1-(beta)-D-ribofuranosyl 5'-monophosphate synthetase AF0114 106189 - 106458 + | transcriptional regulatory protein, putative TERM 43 107073 - 107099 + G 85 -13 -3.79113 | ATTACGGGGGGCACT CCATGCTCATCG ACC CGATGGGCACGG TTCTTATCGAGGCAT AF0115 106445 - 107218 + | hypothetical protein hemD 107215 - 107895 + | uroporphyrinogen III synthase (hemD) act-1 108837 - 107875 - | pyruvate formate-lyase activating enzyme (act-1) TERM 44 107908 - 107922 + gT 73 -2.8 -5.03747 | TAGATTCCCGATGTT CACGTT TTT AAGGTG TTTTTTGGCCGCTTT AF0118 109150 - 108806 - | hypothetical protein AF0119 109305 - 110633 + | hypothetical protein TERM 45 110627 - 110644 + F 74 -4.1 -5.04987 | overlap 110628 GGGGGACTGGCCCCT CTGGTGA ACAT TCACCAA TTTTTTGGCCCTGTT TERM 46 110975 - 110988 + F 81 -6.7 -4.81852 | CTTTACGAATTCATT CAGAG CCTT CTCTG TTTTCTTAATTCTGC AF0121m 111891 - 113209 + | hypothetical protein AF0123 113617 - 113210 - | hypothetical protein AF0124 114486 - 113617 - | hypothetical protein TERM 47 114698 - 114708 + G 70 -3.2 -4.82901 | CGGGAGGGTTGCAGC CGAG AGG CTTG TTTTTATGGCAAGAG AF0125 114630 - 115133 + | hypothetical protein AF0126 115214 - 115134 - | hypothetical protein AF0127 116638 - 115211 - | hypothetical protein TERM 48 117299 - 117281 - g 70 -2.4 -4.94972 | overlap 117282 TATGAGAATCAAAAA CCTGCT CAACTAC AGCAGA GAGGGTGGAATTTAC AF0128 116916 - 117524 + | hypothetical protein AF0129 118325 - 117660 - | hypothetical protein aphA 119392 - 118313 - | acetylpolyamine aminohydrolase (aphA) TERM 49 119530 - 119500 - g 78 -9.6 -3.90318 | overlap 119502 CGAGCATGTTATAAA GACGAGGAGAAGCC ACA GGCTTTACCTCGAC AAGCCGGTTGAGAGG TERM 50 119528 - 119502 - g 77 -10.8 -3.54 | overlap 119500 AGCATGTTATAAAGA CGAGGAGAAGCC ACA GGCTTTACCTCG ACAAGCCGGTTGAGA AF0131 119465 - 120049 + | NAD(P)H-flavin oxidoreductase, putative AF0132 120588 - 120115 - | hypothetical protein acaB-3 121879 - 120644 - | acetyl-CoA acetyltransferase acaB-4 123072 - 121876 - | 3-ketoacyl-CoA thiolase (acaB-4) TERM 51 122163 - 122141 - GR 77 -8.4 -3.86346 | opp_overlap 122145, overlap 122146 CCATCTCTGCAGAAA CCAAGGGCCT CGT AGGCCATTAG CTCATGGTGGGCAAA AF0135 123458 - 123012 - | hypothetical protein TERM 52 123145 - 123125 - GR 71 -4.8 -4.58283 | gap 1 CAACTCTTGCAAAAA TTG-TGGAG CTGG CTCCATCAA GCTTTATGGCGGCAA AF0136 124075 - 123518 - | hypothetical protein AF0137 124179 - 124643 + | transposase, putative TERM 53 124906 - 124889 - g 74 -4.1 -5.03994 | TTCGACAGAGAAAAA GCAAAGA AATC TCGTTGC AATCGATGAAACTGT AF0138 124740 - 125171 + | transposase IS240-A AF0139 125872 - 125354 - | hypothetical protein ubiE 125996 - 126781 + | ubiquinone/menaquinone biosynthesis methyltransferase (ubiE) AF0141 126788 - 127087 + | hypothetical protein AF0142 127105 - 127566 + | cytochrome C oxidase, subunit II, putative AF0143 127566 - 128975 + | hypothetical protein cbaB 128980 - 129360 + | cytochrome C oxidase, subunit II (cbaB) AF0145 129724 - 129386 - | hypothetical protein AF0146 130150 - 129935 - | hypothetical protein AF0147 130737 - 130213 - | hypothetical protein AF0148 130973 - 131230 + | hypothetical protein AF0149 131375 - 131629 + | hypothetical protein AF0150 132382 - 132113 - | hypothetical protein AF0151 132896 - 132594 - | hypothetical protein TERM 54 132691 - 132711 + gH 76 -4.7 -5.02439 | opp_overlap 132694, overlap 132694 132696 GGTTCATCCTCGTCA TAATTCCGA TGC TCGGGATTC TTTTTCTGATTATAT TERM 55 132694 - 132708 + gH 77 -6.4 -4.58563 | opp_overlap 132694, overlap 132691 132696 TCATCCTCGTCATAA TTCCGA TGC TCGGGA TTCTTTTTCTGATTA TERM 56 132804 - 132766 - GH 100 -10.9 -4.60797 | overlap 132751 CTGCGAGAGAGAAAA CCCCCCTCGAAATCCTC AAGGA GAGGTATGCGAGGGGAG AGATAAGCGAGGAGG copB 132861 - 134933 + | copper-transporting ATPase, P-type (copB) AF0153 135917 - 135309 - | hypothetical protein TERM 57 135935 - 135952 + H 85 -8.5 -4.3453 | opp_overlap 135935 CATCACCACCCCAAA CACTGTT ACCT AACAGTG TTTATATTTAACATT TERM 58 135952 - 135935 - H 73 -8.5 -3.62572 | opp_overlap 135935 CATCACCACCCCAAA CACTGTT ACCT AACAGTG TTTATATTTAACATT AF0154 136057 - 136890 + | hypothetical protein AF0155 136953 - 137375 + | hypothetical protein fdx-1 137389 - 137676 + | ferredoxin (fdx-1) AF0157 137776 - 138318 + | molybdopterin oxidoreductase, iron-sulfur binding subunit AF0158 138319 - 139404 + | hypothetical protein TERM 59 139705 - 139675 - g 83 -9 -4.4078 | CGTTTCGAAGGAAAA GCAGAGCAGAAGAT ACG AGCCTCTGCCCTAC AACACACCAATCACT AF0159 139394 - 142798 + | molybdopterin oxidoreductase, molybdopterin binding subunit, putative AF0160 142808 - 143332 + | hypothetical protein moeA-3 143301 - 144503 + | molybdenum cofactor biosynthesis protein (moeA-3) AF0162 144745 - 145095 + | hypothetical protein AF0163 145253 - 145804 + | hypothetical protein TERM 60 147152 - 147140 - g 76 -3.4 -5.15634 | GAGCTCATTAAAAAA CATC TTGGT GATG GATATGGAGCTAAAG nirA 145865 - 147175 + | ferredoxin-nitrite reductase (nirA) AF0165 147156 - 147389 + | hypothetical protein fdx-2 147704 - 147522 - | ferredoxin (fdx-2) fprA-1 148711 - 147701 - | flavoprotein (fprA-1) AF0168 149113 - 148835 - | arsenical resistance operon repressor, putative AF0169 149579 - 149118 - | hypothetical protein AF0170 149663 - 150967 + | hypothetical protein AF0171 150971 - 151576 + | hypothetical protein AF0172 151573 - 152226 + | hypothetical protein AF0173 152676 - 152197 - | reductase, assembly protein AF0174 153896 - 152673 - | molybdopterin oxidoreductase, membrane subunit AF0175 154648 - 153893 - | molybdopterin oxidoreductase, iron-sulfur binding subunit AF0176 157343 - 154653 - | molybdopterin oxidoreductase, molybdopterin binding subunit TERM 61 157307 - 157297 - G 76 -6.8 -4.43911 | opp_overlap 157306 AAACCGGAAGCAAAA GCAG TCG CTGC AGAGAGCTTGATAAA fwdE 157971 - 157402 - | tungsten formylmethanofuran dehydrogenase, subunit E (fwdE) TERM 62 159228 - 159214 - gH 73 -7.1 -4.02736 | AAGGGAGATTATAAA GGCAG TCTTC CTGCC AGTCTTCGACGGAGA AF0178 158414 - 159376 + | hypothetical protein AF0179 159331 - 160074 + | hypothetical protein AF0180 160948 - 160088 - | hypothetical protein AF0181 162162 - 160990 - | Sep-tRNA:Cys-tRNA synthetase TERM 63 162155 - 162169 + g 100 -7.2 -5.28315 | AGTTCCATAGGCTTA CTTAAC ATT GTTAAG TTTTTTAAGTTTTAT AF0182 163208 - 162174 - | hypothetical protein AF0183 163584 - 163186 - | hypothetical protein AF0184 164138 - 163800 - | hypothetical protein nifU-1 164603 - 164142 - | nifU protein (nifU-1) nifS-1 165787 - 164609 - | nifS protein, class-V aminotransferase (nifS-1) AF0187 166127 - 165768 - | hypothetical protein AF0188 166361 - 166128 - | hypothetical protein AF0189 167004 - 166714 - | hypothetical protein AF0190 167769 - 167215 - | cytochrome C oxidase, subunit II, putative AF0191 168165 - 167905 - | hypothetical protein AF0192 168416 - 168189 - | hypothetical protein TERM 64 168445 - 168425 - H 75 -10.5 -3.09968 | overlap 168427 CAGCCAACGTTAACA GAGCTATAC AGA GCATAGCTC ATACATGTGTTCACT TERM 65 168944 - 168962 + H 86 -11.8 -3.41795 | GTATAATGGTATATG GATGTAGC AAA GCTACATC TTATCATGACAATTT TERM 66 169095 - 169083 - H 76 -3.4 -5.20534 | ACTAACGAACAAAAA GATC AAGTG GATC ATCAAACAGCTCGAA TERM 67 169780 - 169803 + H 90 -11 -4.15366 | overlap 169782 GAGAGGTTCTTTGGG CTGATGGAGC AGAA GCTCCATCTG TTTGATTCTTTGGAT TERM 68 169782 - 169801 + H 89 -12.2 -3.66237 | overlap 169780 GAGGTTCTTTGGGCT GATGGAGC AGAA GCTCCATC TGTTTGATTCTTTGG AF0194 170014 - 170091 + | hypothetical protein AF0195 170114 - 170434 + | hypothetical protein TERM 69 170863 - 170874 + G 73 -5.8 -4.51812 | overlap 170862 170861 170871 TACACGATGCGCTAC GTCG AGGA CGAC TTTGTTGTTATCAGG TERM 70 171398 - 171386 - g 71 -7.7 -4.07568 | CGGTGTTCCTTAAAA TGCTC ATT GAGCA TCCAGAGGCTGAGAA alkK-1 170566 - 172188 + | medium-chain acyl-CoA ligase (alkK-1) acs-1 172275 - 174263 + | acetoacetyl-CoA synthetase AF0198 174263 - 174703 + | monoamine oxidase regulatory protein, putative TERM 71 175934 - 175917 - g 74 -11.3 -3.10053 | ACATAGCTGAACACA TCCTCGG AATG CCGAGGA GCTACAGAGTTTAGC acd-1 174716 - 175948 + | acyl-CoA dehydrogenase (acd-1) TERM 72 176003 - 175982 - gf 82 -8.8 -4.1721 | ACCCAGAGCTGAAAA TTGAGCGA AAGGAA TCGCTCAA CAAGATGCTCTGGAA TERM 73 177253 - 177273 + GF 77 -8.3 -3.85698 | GACCTTGGAGAGTTC GACGAGG ATGGCTA CCTCGTC TTTCTCGGGAGGAAG fadD-2 175951 - 177756 + | long-chain-fatty-acid--CoA ligase (fadD-2) acaB-5 177722 - 178828 + | 3-ketoacyl-CoA thiolase (acaB-5) TERM 74 179111 - 179127 + G 76 -4.3 -5.01811 | opp_overlap 179111 CTTGGCGGCATACGA GCACGTT GCC AGCGGGC TTTTTGATTTGGTAA TERM 75 179916 - 179950 + G 71 -7.1 -4.21141 | gap 1, overlap 179915 179920 GTTGCACTTGCACAC GCATGGG-GTGGGACT TTGC AGTTCCACACCCTCGC TTTGCTTTCTTCAAG acaB-6 178830 - 179972 + | 3-ketoacyl-CoA thiolase (acaB-6) AF0203 179983 - 180432 + | hypothetical protein TERM 76 180425 - 180439 + F 70 -2.9 -5.08824 | AGTACTTTGAACCAG TGAAA TAAAC TTTCA TTTTTTGCATGAAAC TERM 77 180698 - 180683 - gf 70 -2.4 -5.00616 | TTCCTGTGGAAAAAA GGCTGA TATT CCTGCC CCAGTGCCTCAGAAA AF0204 180505 - 181095 + | hypothetical protein AF0205 181055 - 181669 + | hypothetical protein AF0206 181644 - 182183 + | exosome complex RNA-binding protein Csl4 rpoL 182185 - 182445 + | DNA-directed RNA polymerase, subunit L (rpoL) AF0208 183936 - 182491 - | signal-transducing histidine kinase TERM 78 182655 - 182690 + g 70 -9.8 -3.22476 | CACCGTACTTGAAGC TCTCCTTGAAAATCTG CCTC CTGATTTCCAAGGGGA TTCCTACTCCGTAGT TERM 79 183590 - 183576 - G 74 -8.6 -4.08216 | TCATCTCCCTCAAAA TCTTCC AGA GGAAGA ATCCGAGAATCGGCG TERM 80 184532 - 184519 - g 74 -9.5 -3.5891 | overlap 184517 TGTGATAACTAAAGA CCCCG AAAC CGGGG AGATGAACGCTGGAA AF0209 184049 - 185494 + | hypothetical protein TERM 81 186283 - 186246 - g 71 -7.9 -4.07885 | gap 1, overlap 186247 CAGGTGCTCTGAAAA GGCTCTCACACCTCAAAA ACC CTTTAAGGT-TGAGAGCG AGAACTTTGAGGCCT TERM 82 186282 - 186247 - g 74 -11.4 -3.04517 | gap 1, overlap 186246 AGGTGCTCTGAAAAG GCTCTCACACCTCAAAA ACC CTTTAAGGT-TGAGAGC GAGAACTTTGAGGCC AF0210 185491 - 186987 + | hypothetical protein AF0211 186994 - 188175 + | hypothetical protein hisD 189386 - 188172 - | histidinol dehydrogenase (hisD) TERM 83 188433 - 188423 - G 70 -3.2 -4.83169 | AGTTTCCGAGAAAAA CGCT GCC AGCA TTTCTGACTTTCCCG AF0213 190191 - 189412 - | hypothetical protein TERM 84 189925 - 189897 - GH 83 -11.1 -3.62597 | opp_overlap 189887 189886 TGTATTCCTCAAGAA CGCTTTCAGGG TCTATCG CCCTGAAAACG GCTGGGGAGCTTTTT TERM 85 190044 - 190058 + gH 81 -11.4 -3.07443 | TTGCCGTAGCCTCAC CCCTCG TGG CGAGGG TTGCGTAAACTCTCG TERM 86 190196 - 190211 + GH 79 -10.4 -3.49182 | GCGTGCGCCATTACT CGCGAC AGCC GTCGCG TTCCTTCTCATCTAT AF0214 190179 - 192209 + | hypothetical protein nac 192243 - 192572 + | nascent polypeptide-associated complex protein AF0216 192569 - 193312 + | L-isoaspartyl protein carboxyl methyltransferase PimT, putative napA-1 194415 - 193282 - | Na+/H+ antiporter (napA-1) TERM 87 193923 - 193906 - G 82 -11.3 -3.79043 | opp_overlap 193905 193904 TATCAGGAAGGCAAA GGCTACC TGCA GGTAGCC AGTTATGAAGTAAAT TERM 88 194309 - 194295 - G 71 -6.4 -4.28656 | AGCTAACACCGAAAA TCATGC CGA GCACGA TCTCAAGAACAACTA trkA-1 195581 - 194412 - | TRK potassium uptake system protein (trkA-1) TERM 89 194668 - 194658 - G 73 -3.2 -5.00616 | CGCTTTGCCAAAAAA CCTC GAG AAGG CCTTGGCCATGCTGA TERM 90 194766 - 194778 + g 82 -7.7 -4.6526 | opp_overlap 194766 AACCAGAGTTGGAAA GCTTG AAA CAAGC TTTTTCAGAATTTCT TERM 91 194998 - 195030 + g 85 -3.6 -5.39755 | gap 2, overlap 195000 195001 TCCCCTTCACCCATG TCTCCTTTGAGCAGCA GAA TGTTG-TCGAAGG-GA TTTTTTGTGGTTCTC leuA-2 197092 - 195581 - | 2-isopropylmalate synthase TERM 92 197839 - 197827 - g 70 -4.8 -4.72486 | opp_overlap 197827 197830 CAGAAAGTCGAAAAA GCTC GGTGA GAGC TACTTCAAGGACTCC acc 197273 - 198793 + | pyruvate carboxylase subunit A braG-1 199479 - 198805 - | branched-chain amino acid ABC transporter, ATP-binding protein (braG-1) braF-1 200311 - 199466 - | branched-chain amino acid ABC transporter, ATP-binding protein (braF-1) TERM 93 200367 - 200351 - g 76 -2.9 -5.07486 | CAGGCGGAAGAAAAA GCAGTAA AGC TTGCCGC TGAGGAGATAAACGC braC-1 200318 - 201460 + | branched-chain amino acid ABC transporter, periplasmic binding protein (braC-1) TERM 94 201514 - 201556 + GF 91 -9.1 -4.84527 | overlap 201515 201517 GTATTTGGTGCTGTG GTGGGGGGAATCTGGGGGC TCGTC GCCTCAGGATTCTCCCTAA TTTTTGGTGTGTCGA TERM 95 201515 - 201555 + GF 90 -12.6 -3.49993 | overlap 201514 201517 TATTTGGTGCTGTGG TGGGGGGAATCTGGGGGC TCGTC GCCTCAGGATTCTCCCTA ATTTTTGGTGTGTCG TERM 96 201517 - 201553 + GF 93 -13 -3.31261 | overlap 201515 201514 TTTGGTGCTGTGGTG GGGGGAATCTGGGGGC TCGTC GCCTCAGGATTCTCCC TAATTTTTGGTGTGT TERM 97 201915 - 201931 + GF 72 -3.7 -4.82901 | CCTAGCGGTCCTCTG CCTCA CTGCGCT TGAGG TTTTTGTGACGAGAA braD-1 201472 - 202326 + | branched-chain amino acid ABC transporter, permease protein (braD-1) braE-1 202245 - 203261 + | branched-chain amino acid ABC transporter, permease protein (braE-1) TERM 98 203609 - 203629 + G 74 -9.7 -3.65199 | overlap 203602 TTCTCCTTGCTGTCA CCGCTTTGA ACC TCGGAGCGG TTTGGGTGGGAGCTT noxC 203272 - 203790 + | NADH oxidase (noxC) pheA 205653 - 203791 - | chorismate mutase/prephenate dehydratase (pheA) TERM 99 203959 - 203971 + g 70 -3.3 -4.82901 | CGATTCGAGCTTTCT GAGGT TAA ACCCC TTTTTGTGGAAGACC TERM 100 205230 - 205248 + g 73 -8.8 -3.75169 | CCTCAACGTCGAGCC TGCTGAGC ACG GCTCCGCA TTTCCTGAGCTCCTC aroD 206240 - 205650 - | 3-dehydroquinate dehydratase (aroD) TERM 101 206105 - 206119 + g 74 -4.3 -4.84918 | CTCCGTCCGAAACCC TTCTG CACGT CAGAA TTTTCTCTTTATCAA AF0229 207213 - 206242 - | 3-dehydroquinate synthase TERM 102 206538 - 206549 + gr 71 -5.8 -4.37092 | CAGCCTTAAGCTCAG CCAG ATAT CTGG TTTTATCCCCAACCT AF0230 207970 - 207188 - | fructose-bisphosphate aldolase TERM 103 207899 - 207920 + g 73 -2.9 -5.01845 | overlap 207886 207885 207884 TATCCCGTGGTCCAT CGGGAGTAT TACT GTCCTTCCG TTTTTCATTATTCTG TERM 104 208151 - 208172 + H 73 -2.4 -5.2696 | TTTAAGCTTTTCCAA TTTTTGAT TTATCT ATCGAAAA TTTTTTAAGTTTTAA glnH 208203 - 208997 + | glutamine ABC transporter, periplasmic glutamine-binding protein (glnH) glnP 209037 - 209711 + | glutamine ABC transporter, permease protein (glnP) AF0233 209931 - 210179 + | hypothetical protein AF0234 210562 - 210161 - | hypothetical protein TERM 105 210605 - 210592 - R 70 -2.5 -5.15969 | TTTGAAGTTAAAAAA TTTTA CAGC TAAAA AACTCTTATACTCTC htpX 211607 - 210600 - | heat shock protein (htpX) TERM 106 211737 - 211707 - H 100 -9.9 -5.51353 | gap 1, opp_overlap 211709 CAAAAACAATAAAAA CAACTTC-TCGAAC ATAT GTTCGATGAAGCTG CTTGAAGGAATTGTG AF0236 211750 - 211872 + | hypothetical protein panF-3 211866 - 213251 + | pantothenate permease (panF-3) cbf5 214225 - 213248 - | H/ACA RNA-protein complex component Cbf5p TERM 107 214091 - 214075 - G 70 -8.7 -3.64703 | opp_overlap 214077, overlap 214078 TCCTCCTCACCCAAA CAACCAC CTC GTGGCTG CTTGGCCCCATGGGC gptA-1 214319 - 214903 + | xanthine-guanine phosphoribosyltransferase (gptA-1) TERM 108 215169 - 215194 + G 80 -11.9 -3.38812 | opp_overlap 215192, overlap 215167 TCAGAATTTGCGAGG CTCGTTGTGCC GAGA GGTACAACGGG TGTTGTTGCAGACCC adeC 214884 - 216554 + | adenine deaminase (adeC) AF0241 216945 - 216526 - | hypothetical protein TERM 109 217301 - 217317 + G 71 -5.1 -4.5442 | CGACGACTTCCTTGT TGTTGCC GGA GACAACA TTTTCTCCTTCGAGC graD-1 216996 - 217994 + | glucose-1-phosphate thymidylyltransferase (graD-1) TERM 110 219097 - 219082 - g 71 -5.4 -4.46112 | opp_overlap 219064, overlap 219083 GGTTATGGAAAGAAA CCTCCT TCTG AGGAGA ATCAACATCAGGCAG TERM 111 219257 - 219240 - g 85 -4.1 -5.42259 | CCATGCTGAAAAAAA TTCTTCC CAAA GGTAGAA GGATAACCGACCTCA AF0243 217991 - 219580 + | hypothetical protein AF0244 219696 - 220925 + | cell division control protein 6, putative TERM 112 220919 - 220931 + T 78 -2.7 -5.40279 | CCTCAACTTATTCCA GTTTT AGA AAGAC TTTTATTTTCTTTTA desR 221638 - 221060 - | iron-dependent repressor (desR) TERM 113 221745 - 221714 - R 77 -11 -2.81872 | gap 1, overlap 221711 221709 221735 CCCATCATAACAGCA GTGGCG-TAGCCT GCAGTAA AGGCTATCGCCAC AGACAGCAAGAATAC feoB-1 223608 - 221689 - | iron (II) transporter (feoB-1) TERM 114 222218 - 222202 - G 71 -5.1 -4.49556 | overlap 222204 CCTTGAGGAAATAAA TCCCGCT ATC AGCAGAA CTGCAGTAACCACTG TERM 115 223807 - 223825 + G 73 -6 -4.45945 | overlap 223792 223813 CTCCCCTTTTTGGAG GAGATTTC AAA GGAGTCTC TTTTGATTGATGAAT AF0247 223717 - 225084 + | hypothetical protein TERM 116 225078 - 225100 + T 70 -5.6 -4.41047 | overlap 225079 225080 CCTCAAGCTTCTCAG TTCTTAGCGT AGC ATGCTAAGGG TTTTCCTTCGAAGAT AF0248 226210 - 225074 - | NADH-dependent flavin oxidoreductase TERM 117 225252 - 225264 + g 74 -4.8 -4.87665 | overlap 225239 TTCAGCAGTTCCTCT GCAG TTTGC CTGC TTTTTATCCCTCCCA AF0249 226328 - 226606 + | hypothetical protein AF0250 226596 - 226928 + | hypothetical protein AF0251 228102 - 226918 - | hypothetical protein pyrG 228354 - 229952 + | CTP synthetase guaA-1 229952 - 230863 + | GMP synthase subunit B noxA-1 232183 - 230864 - | NADH oxidase (noxA-1) AF0255 232456 - 232719 + | hypothetical protein purP 233837 - 232716 - | 5-formaminoimidazole-4-carboxamide-1-(beta)-D-ribofuranosyl 5'-monophosphate synthetase-like protein AF0257 234599 - 234324 - | hypothetical protein AF0258 234882 - 234541 - | hypothetical protein AF0259 234934 - 235305 + | hypothetical protein TERM 118 235750 - 235782 + T 72 -8.4 -3.56594 | gap 2, opp_overlap 235748, overlap 235774 235775 TTAAGCGATGAGAGC GCCCG-GGC-CGGGAT TTG AACCCGAGTCGCGGGC TTTCCGCGGATTTAG gltX 237561 - 235906 - | glutamyl-tRNA synthetase AF0261 237592 - 238809 + | hypothetical protein alkK-2 240483 - 238828 - | medium-chain acyl-CoA ligase (alkK-2) TERM 119 240631 - 240651 + rH 100 -12.5 -4.86033 | overlap 240612 240629 240650 CAGGTTCGAATCCTG CCGGCGGCG TAT TGTCGCCGG TTTTTGTGAACCTTT AF0263 242145 - 240673 - | hypothetical protein TERM 120 241216 - 241226 + gH 71 -5.4 -4.47307 | opp_overlap 241216, overlap 241211 GATGGCTGCCGAAAT TCTC GTC GAGA TTTTCCTGTTGATTT rad2 241982 - 242992 + | flap endonuclease-1 TERM 121 243109 - 243086 - g 100 -12.5 -4.36914 | overlap 243099 GGGGCGTTGAGAAAA TCCCGGAAG ATGATG CTTCCGGGA AGCTGCTCGTGGAGA moaB 242983 - 243495 + | molybdenum cofactor biosynthesis protein (moaB) AF0266 244507 - 243677 - | hypothetical protein AF0267 246332 - 244539 - | hypothetical protein AF0268 246511 - 246398 - | hypothetical protein AF0269 246748 - 246563 - | hypothetical protein AF0270 247342 - 246755 - | alkyl hydroperoxide reductase AF0271 248316 - 247501 - | heterodisulfide reductase, subunit B, putative AF0272 248849 - 248418 - | hypothetical protein soxA 248987 - 250591 + | sarcosine oxidase, subunit alpha (soxA) TERM 122 251755 - 251777 + G 76 -6.2 -4.65895 | opp_overlap 251734, overlap 251758 CTTCACCGCTGCAAG CTACTTCGCC GAT GGTGGAGTTG TTTTTCCATGGCCCG TERM 123 251758 - 251774 + G 76 -6.5 -4.44608 | opp_overlap 251734, overlap 251755 CACCGCTGCAAGCTA CTTCGCC GAT GGTGGAG TTGTTTTTCCATGGC soxB 251354 - 252418 + | sarcosine oxidase, subunit beta (soxB) slgB-1 252685 - 255429 + | surface layer protein B (slgB-1) AF0276 255483 - 256496 + | hypothetical protein TERM 124 257879 - 257897 + G 72 -3.8 -4.83615 | overlap 257880 GGACGAGTACGCTTT GCTGCAGA AGG TTTGCAGA TTTTTCTCAAAAATC AF0277 256572 - 258461 + | signal-transducing histidine kinase, putative AF0278 258601 - 258458 - | ISA1214-1 transposase AF0279 258668 - 259636 + | ISA1214-1 transposase AF0280 259718 - 259933 + | hypothetical protein AF0281 260247 - 259948 - | hypothetical protein AF0282 260655 - 260314 - | hypothetical protein acaB-7 260824 - 262014 + | acetyl-CoA acetyltransferase AF0284 262011 - 262508 + | hypothetical protein TERM 125 263584 - 263554 - g 77 -12 -3.05384 | TTGGTCTGGATGTAA TCCTTGCAAAGGTC GAG GAGCTTTACAAGGA GAAGGGATTCGAGAT hbd-2 262518 - 264494 + | 3-hydroxyacyl-CoA dehydrogenase (hbd-2) etfB 264570 - 265313 + | electron transfer flavoprotein, subunit beta (etfB) TERM 126 265605 - 265593 - g 71 -10.5 -3.04461 | opp_overlap 265590 265589 TACTGATTGGCAACA CCGCC CAG GGCGG GGAGTTTGCACCGTA etfA 265313 - 266266 + | electron transfer flavoprotein, subunit alpha (etfA) cysC 266677 - 267144 + | adenylylsulfate kinase TERM 127 267331 - 267346 + G 91 -6.8 -5.19261 | TCTTTGGTGTTGCTT GGAGCC TTGT GGTTCC TTTTTTGATGGCTTT rfbA-2 267237 - 267995 + | polysaccharide ABC transporter, permease protein (rfbA-2) TERM 128 268404 - 268386 - g 82 -11.8 -3.57389 | opp_overlap 268383 AATATGAGGAGATAA TCGAGTTC GCA GAACTCGA AGATTTCAGGAATGC rfbB-2 267992 - 268723 + | polysaccharide ABC transporter, ATP-binding protein (rfbB-2) AF0291 269386 - 270330 + | hypothetical protein AF0292 270847 - 270503 - | hypothetical protein AF0293 271341 - 270886 - | hypothetical protein AF0295 272675 - 272899 + | hypothetical protein AF0296 272884 - 273357 + | hypothetical protein TERM 129 273383 - 273364 - T 79 -5.8 -4.91511 | gap 1 ACTCGATGATAAAAA GTTGTGTTG CTC CAAC-CAAC AGATCACCTCTGGTT AF0297 273628 - 273518 - | hypothetical protein AF0298 274094 - 273717 - | hypothetical protein AF0299 274395 - 274087 - | hypothetical protein TERM 130 274339 - 274350 + g 70 -3 -4.90013 | TATTATCTCTATTAT TTCA TCCT TGAA TTTTTCCTTAAGTTC TERM 131 274430 - 274440 + r 75 -5.4 -4.7416 | overlap 274436 AAAGCTTAAATTCCT TTCG TCT CGAA TTTTTGAACTTTTGA AF0300 274756 - 274604 - | hypothetical protein AF0301 275198 - 274995 - | hypothetical protein ugd-1 275415 - 276389 + | UDP-glucose dehydrogenase (ugd-1) TERM 132 277359 - 277369 + GT 79 -6.8 -4.55287 | opp_overlap 277350 AAGAGACGAAGGATT CGAG GAG CTCG TTTTCTCTAAGTACA AF0303 276358 - 277551 + | hypothetical protein AF0304 278661 - 277582 - | hypothetical protein TERM 133 278483 - 278465 - G 71 -7.6 -4.04491 | opp_overlap 278464 278465 278480 AACTTAGAATAATAA TCAAAATA CTT TATTTTGA ATTTTTCAGTGCTTC AF0305 278851 - 278708 - | ISA1214-2 transposase AF0306 278918 - 279886 + | ISA1214-2 transposase AF0307 280906 - 280145 - | hypothetical protein AF0308 281312 - 281004 - | hypothetical protein TERM 134 281434 - 281422 - gR 76 -3.4 -5.20534 | overlap 281427 ACTAACGAACAAAAA GATC AGATG GATC ATCAAACAACTCGAA AF0310 282905 - 282240 - | hypothetical protein AF0309 281399 - 282298 + | ISA0963-2 transposase TERM 135 284999 - 285020 + Tr 77 -10.9 -2.79501 | opp_overlap 284998, overlap 284989 AGCTCTCCACGTAAC GCTGGACTT TATC GAGTCCAGC TCTGCTGCCAGTCTA AF0312 287284 - 286442 - | hypothetical protein TERM 136 287931 - 287919 - g 71 -7.7 -3.99805 | opp_overlap 287919 TCTCAAAAATGCAAA GCTGT TTT ACAGC TCAATTCTTCATGAC AF0313 287674 - 288126 + | hypothetical protein TERM 137 288165 - 288142 - f 75 -10.4 -3.14211 | gap 1, overlap 288146 288157 ACTGCGTGCTACGAA GTGAGCAAGCT GAA AGCTTGC-CAC GAAGTGGCGAACGCC TERM 138 288162 - 288146 - f 76 -10.9 -2.56596 | overlap 288142 288157 CGTGCTACGAAGTGA GCAAGCT GAA AGCTTGC CACGAAGTGGCGAAC AF0314 288258 - 288452 + | hypothetical protein AF0315 288430 - 288861 + | hypothetical protein AF0316 288877 - 289218 + | hypothetical protein AF0317 289215 - 289664 + | hypothetical protein AF0318 289904 - 290359 + | hypothetical protein AF0319 290407 - 290619 + | hypothetical protein AF0320 290721 - 291002 + | hypothetical protein AF0321 292025 - 291051 - | glycosyl transferase rfbQ 292879 - 292019 - | rhamnosyl transferase (rfbQ) AF0323b 293373 - 292876 - | dTDP-4-dehydrorhamnose 3,5-epimerase and related enzyme AF0323a 294242 - 293385 - | dTDP-4-dehydrorhamnose reductas rfbB 295242 - 294244 - | dTDP-glucose 4,6-dehydratase (rfbB) graD-2 296309 - 295251 - | glucose-1-phosphate thymidylyltransferase (graD-2) TERM 139 297784 - 297761 - H 73 -2.4 -5.1971 | AGTAAAAATGAAAAA CCACCTTGTA AACT TATAACGTGG AAGTTGTGTTCATTT AF0327 297781 - 298854 + | hypothetical protein TERM 140 299187 - 299166 - gf 74 -6.5 -4.29139 | gap 1, overlap 299156 299163 TTAAAGGCAAAATAA TGCCCGGCGC TAT GC-CCTGGCA CCACAAATATTTGGG TERM 141 299672 - 299688 + GF 79 -5.1 -5.0133 | opp_overlap 299672 ATTGGATTCAGGAGA GACGATA GAA TAACGTC TTTTTTCAGCAGATA AF0328 298829 - 299944 + | dolichol-P-glucose synthetase, putative TERM 142 300248 - 300261 + G 70 -4.5 -4.71223 | CGCCGTCTTCCTTCC CGTCA TCCT TGGCG TTTTGTCTGTTGTGC AF0329 299955 - 301730 + | transmembrane oligosaccharyl transferase, putative AF0330 302209 - 301727 - | hypothetical protein traB 303396 - 302206 - | pheromone shutdown protein (traB) AF0332 304460 - 303372 - | hypothetical protein hpaA-1 304583 - 306085 + | 4-hydroxyphenylacetate-3-hydroxylase (hpaA-1) TERM 143 306127 - 306156 + G 74 -2.2 -5.14563 | gap 1 ACAGGCGGGAGGATG TTGAGGATGTGCT GAGAA AGCAC-TTCACAA TTTTTTACTCGGAGG AF0334 306069 - 306314 + | hypothetical protein TERM 144 306385 - 306375 - f 78 -2.6 -5.37345 | GCCAAGCAGAAAAAA TTAA ATA TTAA CACGTCTAAAAAAAG TERM 145 307063 - 307075 + G 73 -5.5 -4.70626 | CTCGGAACCAACTAT CCAGT CAG GCTGG TTTTTGAGCTTGTTG pol30 306406 - 307143 + | DNA polymerase sliding clamp AF0336 307147 - 308259 + | DNA primase large subunit hpyA1-1 308483 - 308265 - | histone A1 (hpyA1-1) gspE-1 310547 - 308760 - | type II secretion system protein (gspE-1) TERM 146 310647 - 310634 - gH 78 -2.4 -5.30616 | GGAGGTAAAGAAAAA TCTC AAGGCG GAGA GAATAGAGGTTTTCG AF0339 310449 - 311636 + | alcohol dehydrogenase, iron-containing TERM 147 312472 - 312495 + G 73 -10.2 -3.28712 | overlap 312489 GGGCAACTAAGATTT CCGGTGCGGC GATG GCGGCATCGG TTCTAAGGGGAAACG aor-3 311646 - 313442 + | aldehyde ferredoxin oxidoreductase (aor-3) AF0341 313598 - 313452 - | hypothetical protein AF0342 314047 - 313595 - | nigerythrin, putative wrbA 314760 - 314185 - | tryptophan repressor binding protein (wrbA) AF0344 315142 - 314765 - | desulfoferrodoxin, putative AF0345 315876 - 315382 - | hypothetical protein merP 316611 - 315997 - | mercuric transport protein periplasmic component (merP) mae1 316764 - 317723 + | C4-dicarboxylate transporter (mae1) AF0348 317859 - 318239 + | hypothetical protein AF0349 318236 - 318490 + | hypothetical protein AF0350 318492 - 319127 + | hypothetical protein AF0351 319989 - 319309 - | hypothetical protein TERM 148 319698 - 319709 + g 80 -2.2 -5.44119 | GTAAATCGCTCTCCA GCTT TTCG AGGC TTTTTTTAACCTCCG AF0352 320685 - 319999 - | hypothetical protein AF0353 321307 - 320747 - | hypothetical protein AF0354 321998 - 321282 - | hypothetical protein TERM 149 321784 - 321804 + g 80 -3.2 -5.31855 | opp_overlap 321777 TCCATGAACGGGAAC CTGCCGAG ATAGG CTTTGCAG TTTTTCTTGTTCATG fdx-3 322050 - 322259 + | ferredoxin (fdx-3) TERM 150 322833 - 322794 - g 79 -6.5 -4.66264 | gap 1, opp_overlap 322794 GAAAATTCTGAAAAA CACCACGATATTCCTCCC AAACA GGCAGGAA-ATCGAGATG CTCTTTTCGGAGGAT AF0356 322387 - 323139 + | carbohydrate kinase AF0357 324542 - 323136 - | hypothetical protein TERM 151 323431 - 323443 + g 76 -4.8 -4.91109 | AGCGCTTTAATAACC TCCC CGTAA GGGA TTTTTCTGCTGAAGA AF0358 325878 - 324520 - | DNA repair protein RAD25 TERM 152 324918 - 324929 + g 84 -4.4 -5.27023 | TCTCGAGTATCTCCC TCAG CTTC CTGA TTTTGTTTTTGGAGT AF0359 326007 - 326246 + | hypothetical protein AF0360 326243 - 326941 + | hypothetical protein galE-1 327841 - 326924 - | UDP-glucose 4-epimerase (galE-1) AF0362 327901 - 328128 + | snRNP, putative cinR 328125 - 328511 + | transcriptional repressor (cinR) TERM 153 330410 - 330366 - g 100 -5.8 -5.61881 | gap 2, opp_overlap 330365 330364 330362 CGGTAAAAAGAAAAA CAGGCTGATGAGCAAGTTCAAG GAG CTTGAGCTTGC-CG-CAGTCTG ACTATTTTTCGACTA lon 328546 - 330411 + | ATP-dependent protease Lon AF0365 330939 - 330412 - | hypothetical protein acs-2 331158 - 333203 + | acetyl-CoA synthetase oxlT-2 333219 - 334412 + | oxalate/formate antiporter (oxlT-2) TERM 154 334387 - 334413 + F 93 -5.8 -5.55855 | overlap 334391 TAATTGCAGCCTTTA TGAGCTTCCTCC TCA GGAGGAAGTGAA TTTTATTTTTTTAAA TERM 155 334391 - 334409 + F 91 -13.2 -2.95933 | overlap 334387 TGCAGCCTTTATGAG CTTCCTCC TCA GGAGGAAG TGAATTTTATTTTTT AF0368 334517 - 334693 + | hypothetical protein AF0369 334996 - 334859 - | hypothetical protein eif2BD 336045 - 335026 - | translation initiation factor IF-2B subunit alpha TERM 156 335158 - 335168 + g 76 -6.8 -4.56597 | TTTAACGTTTAGAGG GGCA ATC TGCC TTTTTCCACAGAAAA AF0371 336651 - 336055 - | N-glycosylase/DNA lyase AF0372 337331 - 336648 - | hypothetical protein AF0373 337798 - 338349 + | transcription factor TERM 157 338456 - 338446 - g 86 -6.8 -5.055 | TGAAGGTGTAAAAAA GCTC AAA GAGC TCGGCAAGAAAATAA TERM 158 338760 - 338750 - g 70 -8.2 -3.79251 | opp_overlap 338749, overlap 338751 GAGCTCATGACCAAA GCCC TGA GGGC CTGTCTGAGGGGGAT pho2 338351 - 339148 + | p-nitrophenyl phosphatase (pho2) AF0375 339150 - 339773 + | hypothetical protein cdhE 341210 - 339798 - | acetyl-CoA decarbonylase/synthase complex subunit gamma TERM 159 341021 - 341037 + g 79 -6.6 -4.66833 | opp_overlap 341024 GAGCGGTAAGCTCAA GAAGCT CTTCA AGCTTC TTTTTGACCTTCGGG cdhD 342572 - 341214 - | acetyl-CoA decarbonylase/synthase complex subunit delta cooC-1 343354 - 342578 - | CODH nickel-insertion accessory protein (cooC-1) cdhC 345011 - 343437 - | acetyl-CoA decarbonylase/synthase complex subunit beta TERM 160 344984 - 344995 + g 80 -3 -5.27335 | CTTTAACACCCTCCG GAAT CTCT ATTC TTTTTCTTTCAACCA AF0380 347864 - 345258 - | transmembrane oligosaccharyl transferase, putative dph5 347905 - 348660 + | diphthine synthase TERM 161 348686 - 348696 + G 74 -2.4 -5.10208 | AAGGGAAAAGTGGGG GCTG TTT CTGC TTTTTCTTGGGCTTC AF0382 348680 - 349390 + | hypothetical protein AF0383 349653 - 349351 - | endonuclease III, putative AF0384 349751 - 350692 + | hypothetical protein AF0385 350721 - 351221 + | hypothetical protein TERM 162 351366 - 351388 + G 80 -10.6 -3.65522 | opp_overlap 351372 GGAGTGGAGGGAGCT GACTAAGCCT TCG AGGCTTAGAC TTGTTGCGATGGCTA AF0386 351196 - 351783 + | orotate phosphoribosyltransferase AF0387 351783 - 352700 + | glycosyltransferase, putative AF0388 352762 - 353682 + | hypothetical protein TERM 163 354132 - 354171 + GF 71 -4.9 -4.64766 | AAAGTCGTTATGGAT CTGGGGGAGGAGTGGTA CGAGCT TACTTCTCTGCCCGCAG TTTTTGGAATATCAG AF0389 353670 - 354419 + | hypothetical protein AF0390 354376 - 355443 + | hypothetical protein AF0391 355434 - 355892 + | hypothetical protein AF0392 357309 - 355855 - | hypothetical protein AF0393 358000 - 357275 - | ABC transporter, ATP-binding protein TERM 164 357776 - 357799 + gr 70 -9 -3.1214 | gap 1, overlap 357775 TATCTCCTCTGGTAC GTAGCCAAAGA GGT TCT-TGGCTAC CTTTGTGTTCGCATT dld 359356 - 358025 - | D-lactate dehydrogenase, cytochrome-type (dld) noxA-2 360679 - 359369 - | NADH oxidase (noxA-2) AF0396 361481 - 360699 - | hypothetical protein TERM 165 361550 - 361532 - H 70 -3.2 -4.99035 | CGACGTACAGAAAAA TTCAAGCT ACA AACTTAAA AAGCAAATTAGTTTT AF0397 361636 - 362163 + | hypothetical protein AF0398 362386 - 362817 + | hypothetical protein AF0399 362801 - 363535 + | hypothetical protein noxA-3 365236 - 363581 - | NADH oxidase (noxA-3) TERM 166 364468 - 364481 + g 74 -8.1 -4.10552 | TCAGCCCAGCCTTCT CAGCG AGTT CGCTG TTTGGTTTGATACCA TERM 167 365436 - 365404 - g 70 -11.3 -2.67747 | gap 1, overlap 365403 CGGGCACAGCATAAT CCT-CTCCACCCGG AAATCG CCGGGTGGTGCAGG TGCGAACGTGGCCCA AF0401 365321 - 366175 + | carbohydrate kinase AF0402 366194 - 366367 + | hypothetical protein AF0403 366407 - 367102 + | geranylgeranylglyceryl phosphate synthase-like protein TERM 168 367792 - 367812 + GF 71 -9.7 -2.86636 | opp_overlap 367790 367791 367788, overlap 367791 367788 367794 TCGACCTCAAATATG CAGTTCCGG TTT CCGTAACTG ATGTTTTGCTGATTT ubiA 367062 - 367943 + | prenyltransferase AF0405 368138 - 368389 + | hypothetical protein AF0406 369021 - 368371 - | RNA 2'-phosphotransferase-like protein AF0407 369518 - 369009 - | hypothetical protein AF0408 370333 - 369515 - | hypothetical protein aspB-4 370408 - 371568 + | aspartate aminotransferase TERM 169 372993 - 372983 - g 82 -6.8 -4.788 | AAAGGAATGGAAAAA GGTC TTC GACC GCAGAATATGGGATG AF0410 371625 - 374216 + | signal-transducing histidine kinase, putative cysS 374247 - 375650 + | cysteinyl-tRNA synthetase (cysS) AF0412 375635 - 376081 + | hypothetical protein AF0413 376244 - 377077 + | hypothetical protein AF0414 377504 - 377070 - | hypothetical protein TERM 170 377384 - 377399 + g 74 -2.4 -5.09225 | overlap 377385 TTATCGATGCCGCGA GCTCTC TTAG GGGTGC TTTTTTGACTGCAAT AF0415 377793 - 377587 - | hypothetical protein AF0416 377978 - 377790 - | hypothetical protein AF0417 378564 - 377992 - | hypothetical protein TERM 171 378518 - 378550 + g 70 -9.2 -3.53224 | overlap 378520 TTGCCAATCAAACTC TCTATCGGCAGAGC GGCAA GCTCTGCTGGTATA TTTGCGCCAACCATA TERM 172 378520 - 378548 + g 80 -11.8 -3.34398 | overlap 378518 GCCAATCAAACTCTC TATCGGCAGAGC GGCAA GCTCTGCTGGTA TATTTGCGCCAACCA AF0418 379162 - 378623 - | hypothetical protein TERM 173 378694 - 378705 + gr 80 -3 -5.22039 | CCGAGGTCTTGTAAT CTTT AAGC AAAG TTTTTTCAATTTCAA AF0419 379859 - 379119 - | hypothetical protein AF0420 380053 - 379844 - | hypothetical protein AF0421 380582 - 380067 - | hypothetical protein cysG-1 381339 - 380608 - | uroporphyrin-III C-methyltransferase (cysG-1) TERM 174 380795 - 380809 + g 72 -8.6 -3.86346 | CTATCTGCATCCACC CCTGAT TCA ATCAGG TTTCTGGCAACATCC TERM 175 381872 - 381927 + G 74 -9.9 -3.5774 | gap 3, opp_overlap 381887 381905 TGACCAACTTCCACG GCTCGACTGGAGATA-TCATCTTCCTCG GAA CGAGG-AG-TGAGTACCTCCAGCCGTGC TTTGAGGACTTGGGT TERM 176 382161 - 382179 + G 70 -11 -2.57564 | opp_overlap 382161, overlap 382160 CTGTGTTGCCTCAAA GGCGAGGT CAG ACTTCGCC ATTATCGGAACCTGG TERM 177 382179 - 382161 - g 70 -8.8 -3.53012 | opp_overlap 382161 382160 CTGTGTTGCCTCAAA GGCGAGGT CAG ACTTCGCC ATTATCGGAACCTGG dsrA 381478 - 382734 + | sulfite reductase, subunit alpha (dsrA) dsrB 382728 - 383834 + | sulfite reductase, subunit beta (dsrB) dsrD 383876 - 384109 + | sulfite reductase, subunit gamma (dsrD) TERM 178 384101 - 384115 + F 73 -2.1 -5.2894 | GAGAAGAAGAGAGCT GAAGG TTAAT TCTTC TTTTATTTTATGTTT AF0426 384125 - 385063 + | hypothetical protein AF0428 386247 - 385261 - | GTP1/OBGfamily GTP-binding protein fdx-4 385136 - 385327 + | ferredoxin (fdx-4) TERM 179 385882 - 385896 + gT 79 -10 -3.53012 | opp_overlap 385881 GATGATTGATGCAAC TCTGCC GTA GGCAGA TTTAACCACAGCAGA AF0429 387082 - 386270 - | methyltransferase hemV-1 387986 - 387240 - | iron (III) ABC transporter, ATP-binding protein (hemV-1) hemU-1 388995 - 387991 - | iron (III) ABC transporter, permease protein (hemU-1) hemV-2 390092 - 388992 - | iron (III) ABC transporter, ATP-binding protein (hemV-2) AF0433 391193 - 390093 - | hypothetical protein TERM 180 391130 - 391140 + g 72 -4 -4.82901 | TTCCCTGATGTGGAG CTTT GCT AAAG TTTTTGTAGGGAGAC hbd-3 392230 - 391316 - | 3-hydroxyacyl-CoA dehydrogenase (hbd-3) fad-1 393005 - 392235 - | enoyl-CoA hydratase (fad-1) acd-2 394163 - 393015 - | acyl-CoA dehydrogenase (acd-2) AF0437 394559 - 394164 - | hypothetical protein acaB-8 395727 - 394564 - | acetyl-CoA acetyltransferase AF0439 396304 - 395807 - | AsnC family transcriptional regulator TERM 181 396342 - 396358 + r 90 -9.5 -4.43309 | opp_overlap 396353 ATAAAAATTTTATGT TTGCCAT TAA ATGGCAA TTTTAATTGCAATTA AF0440 396734 - 396387 - | hypothetical protein AF0441 397411 - 396734 - | hypothetical protein exsB 398111 - 397392 - | succinoglycan biosynthesis regulator (exsB) AF0443 400741 - 401085 + | hypothetical protein AF0445 403108 - 402623 - | hypothetical protein AF0444 402016 - 402687 + | phosphoglycolate phosphatase TERM 182 403069 - 403107 + gT 72 -9 -3.38314 | gap 2, opp_overlap 403087, overlap 403066 ACATCCCGCAGGCGT TGCA-GTGCCA-GGAAGC AACAC GCCTCCATGGCACGTGCA TGTTTGAAAGTTAGC AF0446 403694 - 403314 - | hypothetical protein TERM 183 403621 - 403603 - GTR 72 -8.9 -3.27475 | opp_overlap 403603 403600, overlap 403601 CCGCTTACTACAATA GGAACGA CATCC TCGTTCC TGACTTTAGCGAGAG AF0447 404209 - 403661 - | hypothetical protein TERM 184 403867 - 403884 + gH 74 -6.3 -4.46656 | CGTTTGTGATGTGGC TTCTCCA CCAT TGGGGAA TTTTGCTGTTGTCGA TERM 185 405878 - 405865 - g 70 -2.3 -5.00616 | overlap 405867 GTTTTGCTTAAAAAA GAGGG GGTT CCCTA CACATTTCTTAACAT AF0448 404314 - 406629 + | signal-transducing histidine kinase, putative AF0449 406613 - 406990 + | response regulator AF0450 406987 - 407976 + | signal-transducing histidine kinase AF0451 408029 - 408394 + | hypothetical protein AF0452 408369 - 409700 + | hypothetical protein TERM 186 409850 - 409833 - g 70 -4.9 -4.65895 | GGCCTCAGGGAAAAA GAATTGC AGTG ACAATTC TTGAGAGGCTTGGAT AF0453 409697 - 410083 + | hypothetical protein TERM 187 410942 - 410967 + G 72 -4 -4.89567 | gap 1, opp_overlap 410955 GGGAGAAGGTGGACA GGCTT-GCAGA TAAGC TCAGCGAAGCC TTTTCTGTTTTAGAA AF0454 410116 - 411033 + | hypothetical protein noxB-1 412928 - 411030 - | NADH oxidase (noxB-1) TERM 188 411195 - 411181 - G 70 -10 -3.26722 | opp_overlap 411179, overlap 411179 CCGACAGCTATAACA GCAGTG TCA CACTGC AACTCTTTCCTCTCA TERM 189 412082 - 412098 + g 71 -6.5 -4.1523 | overlap 412085 GAGATGCGATAACGG GAACGCT TAC AGCGCTC TTTATCTCTGCTGCA AF0456 413084 - 413539 + | hypothetical protein TERM 190 414070 - 414044 - g 100 -7.2 -5.24129 | opp_overlap 414044 414045, overlap 414045 GGCTCTCACAAAAAA CCCCTCCAAAGG AAA CCTTGTGAGGGA TTTGGAGGGCAATCT TERM 191 414069 - 414045 - g 70 -8.5 -3.73995 | opp_overlap 414045 414044, overlap 414044 GCTCTCACAAAAAAC CCCTCCAAAGG AAA CCTTGTGAGGG ATTTGGAGGGCAATC AF0457 413730 - 414329 + | hypothetical protein pmm 415661 - 414321 - | phosphomannomutase (pmm) TERM 192 416361 - 416381 + G 76 -4.7 -4.94058 | overlap 416362 CCGTTTTCAGCGGGG TCGTGAG GAGCAAG CTCACGG TTTTGTTTCCCTTAA AF0459 415676 - 417886 + | hypothetical protein AF0460 418260 - 417856 - | hypothetical protein AF0461 419016 - 418261 - | hypothetical protein AF0462 419843 - 419013 - | hypothetical protein TERM 193 420671 - 420654 - g 76 -4.9 -4.93877 | gap 1 GTGGAGCAAAGAAAA GTGCA-TC GAG GACTGCAC GGTTTGCAGAGACAT mvhB 420466 - 421068 + | polyferredoxin (mvhB) chlP-1 421224 - 422456 + | bacteriochlorophyll synthase, 43 kDa subunit (chlP-1) gyrA 424800 - 422440 - | DNA gyrase, subunit A (gyrA) AF0466 427129 - 425075 - | hypothetical protein TERM 194 425223 - 425185 - G 70 -4.9 -4.74084 | gap 2, opp_overlap 425189, overlap 425189 AAATCAAAAGTAAAA TCAATGCTATCGCAAAAGA AAC TCTTT-GC-ATAGCATTTA GATGACCGAAGAGAT TERM 195 425388 - 425375 - G 70 -2.3 -4.97158 | overlap 425387 TGAGATGAAAGAAAA GGCGA TAAA CCACC CTATCAAGGCCATTC TERM 196 426291 - 426269 - G 100 -9.8 -4.70659 | overlap 426284 426285 TCTGATACCTAAAAA CAGCGGCATT ATG AAGGCCGCCG ACCCAAGGACCGGGG bcsp31-1 428228 - 427161 - | immunogenic protein (bcsp31-1) TERM 197 428151 - 428136 - G 70 -9 -3.56643 | TGTACATCCGCTAAA GGCGAT TGAG ATCGCC AAGAACAATAGCGCT korB 429024 - 428221 - | 2-oxoglutarate ferredoxin oxidoreductase subunit beta korA 430061 - 429021 - | 2-oxoglutarate ferredoxin oxidoreductase subunit alpha korD 430236 - 430033 - | 2-ketoglutarate ferredoxin oxidoreductase, subunit delta (korD) korG 430814 - 430251 - | 2-ketoglutarate ferredoxin oxidoreductase, subunit gamma (korG) TERM 198 430467 - 430453 - G 79 -8.6 -4.41616 | ATGTTGGCAAATAAA GGAGTT CCG AACTCC CGAATGGATGTTTCG TERM 199 431722 - 431738 + G 76 -8.1 -4.21141 | GCAGTCGGAGATGTC TGTAATC GAG GATTACA TTTCCTTTGTTGGAG AF0472 430940 - 431902 + | hypothetical protein pacS 434326 - 431912 - | cation-transporting ATPase, P-type (pacS) TERM 200 432649 - 432661 + g 70 -9.1 -3.58305 | CCATTCTTTTAAGCT CCTGC ACA GCAGG TTTCGCAGATTCCTT TERM 201 433937 - 433919 - G 70 -4.6 -4.63218 | GCTCCCCGAATAAAA GATAGC GGGCAAG GCTATC AAGAGCTGAACGAAG AF0474 434375 - 434917 + | AsnC family transcriptional regulator TERM 202 434938 - 434909 - T 80 -4.3 -5.30448 | opp_overlap 434915 434918 AAAGAAATACAAAAA GAGAATTAGGCTT TGTA AAGCTTATCTCTC AGCTTAAGAGCAACG AF0475 436026 - 434914 - | hypothetical protein AF0476 436262 - 436023 - | hypothetical protein AF0477 436403 - 437632 + | AAA ATPase family protein phnP 437635 - 438399 + | ATP-binding protein PhnP (phnP) TERM 203 438544 - 438562 + GT 79 -6.6 -4.62069 | overlap 438546 AGCAGGAGTTGTGAT GACCGCAG AGC TTGCGGAC TTTTTCAAGTCAAGG TERM 204 438858 - 438878 + GT 86 -6.1 -5.12617 | overlap 438844 438859 GCGAATTAATTTACT TCGGTGTTT TGA GGACACCGG TTTTTTACGTCCTTA AF0479 438260 - 439327 + | hypothetical protein fucA 439864 - 439304 - | fuculose-1-phosphate aldolase (fucA) TERM 205 440081 - 440062 - g 70 -2.8 -4.88405 | overlap 440057 AAGCTGCAAAGAAAA TCTACCAG ATTG CCGACAGA ATGGCCATGACCACC TERM 206 440191 - 440181 - g 73 -3.2 -4.9138 | overlap 440182 440183 440185 AGGAGGGAAAGAAAA CCGA CCG TCAG GGCGATAGCAACCCT psmB 439929 - 440570 + | proteasome, subunit beta (psmB) AF0482 440573 - 442471 + | mRNA 3'-end processing factor, putative AF0483 442573 - 442788 + | hypothetical protein ribA-1 442822 - 443958 + | GTP cyclohydrolase II (ribA-1) AF0485 443943 - 444680 + | hypothetical protein AF0486 444658 - 445044 + | hypothetical protein TERM 207 445665 - 445680 + G 71 -5.4 -4.44667 | GACGGGCAGGTTCTG GGATCT GGAA AGGTCC TTTATTGTTGAAAAG AF0487 445102 - 447435 + | penicillin G acylase AF0488 447432 - 447752 + | hypothetical protein AF0489 447680 - 448078 + | hypothetical protein psmA 448081 - 448821 + | proteasome subunit alpha TERM 208 448951 - 448929 - g 71 -7.6 -4.00348 | opp_overlap 448947, overlap 448924 CCTCAAGGAAGGAAA GGAGGTCAAC TTC GAGGACCTCC TCGCCGCAGAGGAAG AF0491 448825 - 449529 + | putative RNA-associated protein AF0492 449529 - 450200 + | exosome complex RNA-binding protein Rrp4 rph 450184 - 450960 + | exosome complex exonuclease Rrp41 AF0494 450953 - 451732 + | exosome complex RNA-binding protein Rrp42 AF0495 451998 - 452273 + | hypothetical protein AF0496 452331 - 452858 + | hypothetical protein polB 452991 - 455336 + | DNA polymerase B1 (polB) acd-3 455534 - 457264 + | acyl-CoA dehydrogenase AF0499 457650 - 458459 + | molybdopterin oxidoreductase, iron-sulfur binding subunit TERM 209 458496 - 458482 - g 70 -4.3 -4.65916 | TGGAGTTTAAGAAAA TTGAG GGTGA CTCAA TCCAGTACTTCGCTC TERM 210 458842 - 458852 + G 80 -4.6 -5.0916 | CGACGTCGATCTTCT CGTG GAA CGCG TTTTTGTATTCAAGC AF0500 458460 - 459647 + | molybdopterin oxidoreductase, membrane subunit AF0501 459644 - 460642 + | nitrate reductase, gamma subunit, putative TERM 211 461519 - 461489 - g 71 -7.1 -4.26076 | gap 2 CGAGCTTGAGGAAAA GTACGGTTTGACCAT CAC ATGGTC-AACC-TAC GCCAGCGAGGGAGGT AF0502 460653 - 462320 + | heterodisulfide reductase, subunit D, putative AF0503 462313 - 462750 + | hypothetical protein AF0504 463652 - 462747 - | hypothetical protein AF0505 463658 - 464284 + | hypothetical protein AF0506 465335 - 464235 - | iron-sulfur binding reductase AF0507 466360 - 465332 - | hypothetical protein TERM 212 465415 - 465425 + g 70 -4.6 -4.64598 | TGAGCAGTGATTCAG GGTC AAC GGCC TTTTTGAAATCCTTA TERM 213 466572 - 466562 - H 78 -2.6 -5.37593 | opp_overlap 466562 TTGCAAACTAAAAAA TTTT GTG AAAA TGATTTATAGTTTAT AF0508 466652 - 467662 + | pyridoxine biosynthesis protein AF0509 467659 - 468255 + | glutamine amidotransferase subunit PdxT AF0510 468255 - 469124 + | hypothetical protein rps6E 469157 - 469546 + | 30S ribosomal protein S6e AF0512 469558 - 470175 + | chloroplast inner envelope membrane protein AF0513 470213 - 470611 + | allene oxide synthase, putative AF0514 471152 - 470589 - | hypothetical protein AF0515 472029 - 471145 - | NADH oxidase, putative AF0516 472081 - 472380 + | hypothetical protein TERM 214 473762 - 473720 - g 74 -8.4 -3.98857 | overlap 473753 473756 TAAGGAAAAAATCAA GGAGTTCTACTTGTCACTCA GGT CGAGAGTTAAGGAGAACTCC CCCGTTCCCATAACC cdc21 472416 - 474176 + | cell division control protein 21 (cdc21) AF0518 474219 - 474929 + | hypothetical protein AF0519 474926 - 475375 + | hypothetical protein AF0520 475372 - 476214 + | hypothetical protein AF0521 476680 - 476237 - | protease synthase and sporulation regulator Pai1, putative argE 476720 - 477670 + | acetylornithine deacetylase AF0524 478768 - 478091 - | hypothetical protein AF0523 477691 - 478143 + | hypothetical protein TERM 215 478279 - 478267 - GT 74 -6.9 -4.30576 | TTCCTAGGAGGAAAA CCCCG AAC CAGGG CAGTAAGGGATAGTA AF0525 479544 - 478765 - | hypothetical protein AF0526 479728 - 479549 - | hypothetical protein eif2A 480528 - 479725 - | translation initiation factor IF-2 subunit alpha TERM 216 479911 - 479926 + g 82 -3.9 -5.34555 | overlap 479903 TACCAGAGCCTTTTT GGCCT CAAGAA GGGCC TTTTTTATCCTCTCG TERM 217 480274 - 480290 + g 71 -6.5 -4.24404 | GACGTCCTTTATCGA GAGGTCA ATG TGCCCTC TTTTCGGATTTACAT AF0528 481263 - 480565 - | cytochrome-c3 hydrogenase, subunit gamma TERM 218 480909 - 480883 - G 71 -6.6 -4.26461 | opp_overlap 480872, overlap 480873 ATCAAGCCAAAATAA GTTTTTGGCG GTTCTCT CGCCATAAAC AACACTCACTTTTGA TERM 219 481331 - 481352 + H 73 -6.7 -4.16279 | gap 1, overlap 481333 TTAATTGTTTAGTTT G-ATTGCAAC TAA GTTGCAATGC TTTTACCATAATATG TERM 220 481333 - 481349 + H 73 -9.5 -3.10098 | overlap 481331 AATTGTTTAGTTTGA TTGCAAC TAA GTTGCAA TGCTTTTACCATAAT AF0529 481444 - 481668 + | hypothetical protein TERM 221 481889 - 481903 + F 75 -5.8 -4.71482 | opp_overlap 481879 481876 481889 AATTATGTTACACAA TTTTTG TAA CAAAAA TTTTTAGGATTTCCT TERM 222 481923 - 481904 - f 72 -3.6 -5.06414 | overlap 481905 TTTTTGTAACAAAAA TTTTTAGG ATTT CCTAAAAC ATAAAGAAAGAGTAA TERM 223 482254 - 482238 - f 89 -4.5 -5.57888 | ATTAAAAAAATAAAA TAATACA TAA CGTATTA AAAATCAAAGTGCTT TERM 224 482499 - 482488 - f 74 -4.4 -4.84311 | TGCGATACAATAAAA GTGA GTCT TCAC AAAGATGGCTCGGCA gyrB 482657 - 484180 + | DNA gyrase, subunit B (gyrB) moeB 484200 - 484931 + | molybdenum cofactor biosynthesis protein (moeB) AF0532 485000 - 486223 + | mRNA 3'-end processing factor, putative AF0533 486220 - 486840 + | hypothetical protein AF0534 487786 - 486827 - | hypothetical protein TERM 225 487432 - 487442 + g 74 -4.6 -4.80882 | TCTCAGCTTCTTTTG CGGG AAA TCCG TTTTTGATGTAAAAT TERM 226 488740 - 488727 - g 72 -8.1 -3.86346 | opp_overlap 488710 GGAGTCTGTCAGAAA GGCTC TGAA GAGCC CGCTTCTCGACGTGG ftsZ-1 487909 - 489015 + | cell division protein FtsZ secE 489033 - 489233 + | protein translocase, subunit SEC61 gamma (secE) nusG 489230 - 489682 + | transcription antitermination protein NusG rpl11P 489685 - 490158 + | 50S ribosomal protein L11P (rpl11P) AF0539 490861 - 490166 - | GTPase TERM 227 490228 - 490242 + g 74 -2.2 -5.17744 | CCTCATAACCTGTTT TTTTAA TAT TTGAAA TTTTTATTGGTCTAT AF0540 491549 - 490863 - | hypothetical protein AF0541 491959 - 491546 - | hypothetical protein TERM 228 492307 - 492294 - g 100 -6.7 -5.24531 | opp_overlap 492294 ACTCTGGACAAAAAA TCTCG GTGC CGAGA TTTCGATGCTCAAAG AF0542m 492036 - 492882 + | hypothetical protein AF0543 494541 - 492925 - | hypothetical protein AF0544 496118 - 494553 - | hypothetical protein AF0545 497061 - 496135 - | hypothetical protein narI 497381 - 498115 + | nitrate reductase, gamma subunit (narI) AF0547 498121 - 499554 + | reductase, iron-sulfur binding subunit TERM 229 499543 - 499556 + F 90 -3.9 -6.04324 | GTTGCCAACGCCTTG GTTTA CGAG TAAAC TTTTTTCTTTTTTAA thrS 499614 - 501473 + | threonyl-tRNA synthetase AF0549 501479 - 501802 + | hypothetical protein trzA-1 503054 - 501786 - | N-ethylammeline chlorohydrolase (trzA-1) thrC-1 503163 - 504377 + | threonine synthase AF0552 504382 - 504648 + | hypothetical protein thiF 504649 - 505452 + | thiamine biosynthesis protein (thiF) AF0554 505412 - 505678 + | hypothetical protein AF0555 505809 - 506192 + | hypothetical protein AF0556 506213 - 506434 + | hypothetical protein AF0557 506436 - 507578 + | flavoprotein reductase AF0558 507588 - 508001 + | hypothetical protein TERM 230 508016 - 508030 + F 71 -7.2 -3.90874 | AATTTTTTAAACTTT GTTAAC AAC GTTAAC TTTAAATCTTTTTTC AF0559 508061 - 508858 + | hypothetical protein TERM 231 509434 - 509451 + T 74 -4.1 -5.0538 | opp_overlap 509435, overlap 509435 GAGATCAGAAATCCA ACTGCAA GCTC TTGCAGA TTTTTTGGAGTGCAC AF0562 511901 - 511521 - | hypothetical protein AF0563 512044 - 512328 + | hypothetical protein nifS-2 512338 - 513486 + | nifS protein, class-V aminotransferase (nifS-2) nifU-2 513492 - 513953 + | nifU protein (nifU-2) AF0566 513957 - 514295 + | hypothetical protein AF0567 514758 - 514312 - | hypothetical protein AF0568 515399 - 514935 - | hypothetical protein TERM 232 515843 - 515859 + H 70 -2.9 -5.16071 | CTCAACTATTATCAG CTGTTGA TTT TCTGCAG TTTTTATTAGTCCTT TERM 233 516022 - 515984 - H 88 -11.1 -4.0616 | gap 1, opp_overlap 515992 515994 516015, overlap 516005 CAGCTGAAGGACAAA GTCGGACAGATGGA-GAC ACCA GTCCTCCATCTGTCCTCC GATGTAGGGCAATAT AF0569 516051 - 516233 + | DR-beta chain MHC class II ftsZ-2 516246 - 517424 + | cell division protein FtsZ AF0571 517449 - 517742 + | hypothetical protein TERM 234 517934 - 517914 - g 84 -10.5 -4.1196 | AATTGATGCCGAAAA GAGGTTAAG CTC CTCAACCTC CCACTGGATGGCCAT AF0572 517777 - 518385 + | hypothetical protein AF0573 518382 - 518546 + | hypothetical protein AF0574 518559 - 518825 + | translation elongation factor EF-1, subunit beta TERM 235 519160 - 519170 + G 76 -6.8 -4.43877 | opp_overlap 519160 519158 GGGAGAGGTAATAGA GCTC GGA GAGC TTTCTTTGGAGGTTA AF0575 518822 - 519451 + | hypothetical protein AF0576 519448 - 519708 + | hypothetical protein TERM 236 519859 - 519835 - g 83 -2.7 -5.41746 | opp_overlap 519837, overlap 519837 519839 519848 AATCCCTCAAAAAAA TAGCCGACGGA AAC TCCGTAGCCTT CTACGGTGGAGAGCC AF0577 519708 - 520739 + | hypothetical protein AF0578 521883 - 520729 - | aminopeptidase, putative TERM 237 521839 - 521850 + g 70 -4.4 -4.68424 | AAGCCTCGGCCCGCA CTCT CTGC AGAG TTTTTGGATGAATTC TERM 238 522382 - 522372 - g 71 -6.8 -4.27465 | overlap 522363 TATAACCGAAAAGAA GCTC TAC GAGC AGAAGCTCAAAAAAC AF0579 522022 - 522945 + | hypothetical protein xthA 522975 - 523748 + | exodeoxyribonuclease III (xthA) TERM 239 524034 - 524019 - gf 70 -9 -3.14463 | opp_overlap 524007, overlap 524007 AAGGGCTTTGATGAA CGCCTT TTCA AAGGCG AGCGGAGACGTTGTC TERM 240 524428 - 524414 - gf 73 -10 -2.8805 | opp_overlap 524418, overlap 524418 AGCACGGGGGAGAGA CGAAGG TTG CCTTCG GAAAGGACATCCTTT AF0581 523627 - 525372 + | dolichol-P-glucose synthetase, putative AF0582 525374 - 526696 + | hypothetical protein AF0583 526693 - 527250 + | hypothetical protein TERM 241 527256 - 527241 - f 78 -2.6 -5.45652 | ATTTGCAACAAAAAA TTTATC TTAG GACAAA AACATTTTCATTATG TERM 242 527281 - 527259 - f 70 -3.5 -4.91511 | overlap 527261 ATCTTAGGACAAAAA CATTTTCAT TATGG ATGAAAAAG ATATGCTAATACTCT AF0584 527269 - 527706 + | AsnC family transcriptional regulator AF0585 527711 - 527983 + | hypothetical protein TERM 243 528035 - 528014 - g 100 -8.1 -5.29385 | gap 1 AAGCTAACGAAAAAA TGGAG-GCTT ATA AAGCTCTCCA GAATGCATTACAGCG AF0586 527987 - 528409 + | hypothetical protein AF0587 529967 - 528381 - | hypothetical protein tgtA 531399 - 529954 - | 7-cyano-7-deazaguanine tRNA-ribosyltransferase TERM 244 530310 - 530330 + g 76 -8.3 -4.13945 | GGCTGTCGATGCCGG TGTAGAGGA ACT TCCTCTTCA TTTTGGGGTCAGCCT prsA-1 531415 - 532329 + | ribose-phosphate pyrophosphokinase (prsA-1) AF0591 533685 - 533278 - | hypothetical protein hisG 532515 - 533360 + | ATP phosphoribosyltransferase (hisG) TERM 245 533430 - 533417 - GT 73 -8.1 -3.90112 | GCGGCTTCAATTAAA GAGGG GTCC CCCTC GCTCTCCGTCTCCAC eif2G 534926 - 533652 - | translation initiation factor IF-2 subunit gamma AF0593 534971 - 535357 + | hypothetical protein AF0594 535413 - 535670 + | hypothetical protein TERM 246 536254 - 536264 + G 71 -5.4 -4.56597 | overlap 536242 TAGGCTCAGATTTTA TTGC TGA GCAA TTTTTCAGCAAACCG TERM 247 536528 - 536549 + G 73 -8.9 -3.72576 | ACTTGCTATGCTTTT CAGAAAATT GAGA AATTTTCTG TTTGGTAAAGCGAAG AF0595 535926 - 537374 + | polysaccharide biosynthesis protein, putative TERM 248 538168 - 538158 - g 76 -3.2 -5.20781 | GAGGATAAAATAAAA CCGA TAA TCGA GAAAGAATCTGGCAA TERM 249 538857 - 538835 - g 71 -5.6 -4.55721 | AAAGGCCATAGAAAA CTTTAGGAAA TTT TTCCCTCAAG TAGAATATGCTAACT ugd-2 537633 - 539030 + | UDP-glucose dehydrogenase (ugd-2) TERM 250 539115 - 539096 - f 75 -7.8 -4.07568 | opp_overlap 539087 539086 TCGTTGCTTGCAAAA CCTCGCTT TTCA AAGCGGGG ATACGCAAGGTTTAA TERM 251 539217 - 539191 - f 70 -9.4 -2.56596 | TCCGCTATCAATTTA GCCCGACGGA TAATGAG TCCGTCGGGA TGGGGGTGTAGTGAG TERM 252 539271 - 539295 + F 74 -9.3 -3.53444 | opp_overlap 539288 TTTAGCCGTAAAGGC GGGTGGAAC GGGAGAA GTTCCGCCC TTTAGGGCGGGGTAG TERM 253 539365 - 539353 - f 71 -4.9 -4.63218 | opp_overlap 539351 539353 CTGTTTTCAACAAAA TTTTC GAG GAAAA TGTTTTTAGTTGGAA AF0597 539408 - 539671 + | hypothetical protein AF0598 539668 - 540120 + | hypothetical protein AF0599 541365 - 540613 - | dolichol phosphate mannose synthase, putative TERM 254 540992 - 541007 + g 76 -4.7 -4.95896 | TTGTAAACGACATCG TAGCC CTTTTC GGCTA TTTTTATCAGTTTGT TERM 255 541198 - 541208 + g 84 -2.6 -5.59564 | GTGATTTAGATCGTA TTTT TGC AAAA TTTTTTTGAGTTTCT AF0600 542330 - 541398 - | hypothetical protein AF0601 543361 - 542327 - | hypothetical protein TERM 256 542959 - 542948 - G 70 -3 -4.87133 | ATCTGGCAAATAAAA TTTG TAAC CAAA GATCTCTACTAATGG AF0602 544720 - 543530 - | LPS biosynthesis protein, putative TERM 257 544421 - 544407 - G 73 -2.8 -4.99134 | overlap 544408 ATCTCAAACGAAAAA GTCCCT CTG AGAAAC TCCGAAATATTTAAG AF0603 544995 - 544900 - | hypothetical protein AF0604 545332 - 544970 - | hypothetical protein AF0605 546335 - 546159 - | hypothetical protein wbaZ-2 547398 - 546307 - | first mannosyl transferase (wbaZ-2) AF0607 548440 - 547400 - | LPS glycosyltransferase, putative AF0608 549208 - 548993 - | hypothetical protein AF0609 549498 - 549608 + | hypothetical protein TERM 258 549955 - 549939 - T 82 -8 -4.59853 | opp_overlap 549938 GGAATCTCGGAAAAA CGTGAG TTATT CTCACG GTTCAATTAACTTAA AF0610m 550285 - 549951 - | hypothetical protein TERM 259 550158 - 550168 + g 85 -4 -5.43621 | TCGATGATTAGAACT TTTC CGT GAAA TTTTTTGTAGTTTAT TERM 260 550815 - 550789 - g 86 -8.8 -4.59117 | overlap 550801 AAATGAAGCACAAAA TCAAGCTGAAAG GCT CGTTCAGCTTAA ACGAGAAGGATATTT TERM 261 551112 - 551096 - g 72 -3.6 -4.7497 | CGTATCCACCAAAAA CTGCTG GAATG CTGCAG AAATAGATCCCTTCA AF0611 550776 - 551444 + | hypothetical protein AF0612 551869 - 551483 - | hypothetical protein AF0613 552176 - 551859 - | hypothetical protein AF0614 552803 - 552522 - | hypothetical protein AF0615 553297 - 552908 - | hypothetical protein AF0616 554895 - 553294 - | hypothetical protein AF0617 555995 - 554919 - | LPS biosynthesis protein, putative AF0618 556392 - 556102 - | hypothetical protein AF0619 556592 - 556482 - | hypothetical protein exoM 556782 - 557675 + | succinoglycan biosynthesis protein (exoM) rnhB 558670 - 558053 - | ribonuclease HII (rnhB) srp54 559971 - 558670 - | signal recognition particle protein Srp54 lig 560042 - 561712 + | DNA ligase (lig) AF0624 561709 - 562266 + | hypothetical protein AF0625 562263 - 563099 + | hypothetical protein TERM 262 563147 - 563108 - T 70 -8.6 -3.32963 | gap 1, opp_overlap 563129, overlap 563109 AGTCTGAGGGCAGAA GCGAGGCCAGCCAGCCAAC GTA GTCAGCTA-CTGACCTCGT CTGAATCCAAACTTT TERM 263 563146 - 563109 - T 81 -12.1 -2.59564 | gap 1, opp_overlap 563129, overlap 563108 GTCTGAGGGCAGAAG CGAGGCCAGCCAGCCAAC GTA GTCAGCTA-CTGACCTCG TCTGAATCCAAACTT AF0626 563747 - 563091 - | hypothetical protein AF0627 565155 - 564133 - | iron-sulfur cluster binding protein leuB 566168 - 565188 - | 3-isopropylmalate dehydrogenase leuD 566650 - 566165 - | 3-isopropylmalate dehydratase small subunit AF0630 567275 - 566682 - | hypothetical protein TERM 264 567217 - 567192 - G 71 -7.5 -3.98236 | opp_overlap 567206, overlap 567196 567206 AAACCCTATGATAAA GTAACGCCTCG AAAC CGAGGCGATAT CGGTCATTTCGCTGT TERM 265 567213 - 567196 - G 83 -12.7 -3.63228 | opp_overlap 567206, overlap 567192 567206 CCTATGATAAAGTAA CGCCTCG AAAC CGAGGCG ATATCGGTCATTTCG AF0631 567688 - 567272 - | hypothetical protein nifU-3 567924 - 567691 - | nifU protein (nifU-3) ileS 571061 - 568005 - | isoleucyl-tRNA synthetase TERM 266 571578 - 571560 - g 79 -5.2 -5.00884 | AGCTTGCTGAAAAAA TCAACAGC CTT GCGGTCGA GAATGGAAAAACTGT AF0634 571235 - 572161 + | hypothetical protein bcsp31-2 573158 - 572166 - | immunogenic protein (bcsp31-2) AF0636 575194 - 573155 - | hypothetical protein TERM 267 574135 - 574178 + g 70 -8.9 -3.64915 | gap 1, opp_overlap 574135, overlap 574115 574115 574113 ATCCCCCCTTCAAAA CCTGAAGGGGT-GAGGGGAG CTCTT CTCTGCTCAATCCCCTCAGG TTCTCCTTTCTCGCC AF0637 575643 - 575185 - | hypothetical protein nrtC-2 576353 - 575646 - | nitrate ABC transporter, ATP-binding protein (nrtC-2) nrtB-2 577078 - 576332 - | nitrate ABC transporter, permease protein (nrtB-2) TERM 268 577016 - 576988 - G 100 -8.7 -5.42259 | opp_overlap 576988 GCAGCGTGAAAAAAA CCTCCGCAACCTC GTG GGGGTGGGGGAGG TCGGTTAGGGCGGAA AF0640 578154 - 577075 - | nitrate ABC transporter, ATP-binding protein, putative AF0641 578279 - 578121 - | ISA1214-3 transposase AF0642 578331 - 579299 + | ISA1214-3 transposase TERM 269 579372 - 579336 - f 76 -9 -3.71917 | opp_overlap 579322 579336 579335 AGCGGAAATTTTAAA TTTTCCCTTTTGAA AATTCGTAG TCCAAAAGGGAAAA ATTTTAAAGGATTAT AF0643 579396 - 579866 + | hypothetical protein AF0644 579974 - 579867 - | hypothetical protein eif5A 580207 - 580593 + | translation initiation factor IF-5A speB 580593 - 581420 + | agmatinase (speB) TERM 270 581803 - 581829 + G 71 -10.9 -3.17075 | opp_overlap 581803 ATCTGCCTGATGACA CTCTGAACGCC ATAAA GGAGTTCAGAG TTGCCTTAAAAGGCC icd 581553 - 582791 + | isocitrate dehydrogenase, NADP (icd) TERM 271 583118 - 583132 + G 76 -7.1 -4.57341 | overlap 583114 ATTGTCGATGCCACT GGCTC CTCCA GAGCC TTTTTGCCCAAGATT AF0648 582788 - 583726 + | hypothetical protein AF0649 583723 - 584424 + | hypothetical protein AF0650 584560 - 584913 + | hypothetical protein AF0651 584961 - 585191 + | hypothetical protein TERM 272 585592 - 585573 - g 71 -7.8 -4.11216 | CGGTCATCTCGAAAA CGCCCGAT GAGG ATAGGGCG AAGAAGGTGGTTCTC TERM 273 586209 - 586193 - g 78 -5.8 -4.89477 | overlap 586188 GCTGTAACAAGAAAA CCGAAG GTTTA CTCCGG CCATCCGTTCCTCGT top6B 585188 - 586996 + | DNA topoisomerase VI subunit B AF0653 587270 - 586980 - | hypothetical protein TERM 274 587138 - 587160 + g 76 -2.7 -5.16472 | overlap 587139 CGGGGTTGAGCCTCG TTTCTTCCA TGATT TGGGAGAAC TTTTTTGGCCTTTTT AF0654 587377 - 588777 + | hypothetical protein TERM 275 588982 - 588966 - g 74 -3.6 -4.99035 | overlap 588968 GCAGGCAGAGAAAAA CGCCTT CACTC AGGGCG ATGGAGATATAGAGG AF0655 588778 - 590055 + | hypothetical protein TERM 276 590254 - 590236 - g 74 -3.8 -5.00616 | opp_overlap 590221 CTCTGGCGGAAAAAA TCGCCAGA ATC TCTGAAGA TGAGCTTGAAGACTT TERM 277 591031 - 591055 + G 70 -8.5 -3.71378 | opp_overlap 591041, overlap 591032 591034 CCTTAATCGGCTCCC ACACCGCAAAC CCC GTTAGCGGTGA TTTCAGTCTGGAATG TERM 278 591032 - 591054 + G 74 -12 -2.82505 | opp_overlap 591041, overlap 591031 591034 CTTAATCGGCTCCCA CACCGCAAAC CCC GTTAGCGGTG ATTTCAGTCTGGAAT TERM 279 591205 - 591185 - g 76 -8.3 -4.27861 | opp_overlap 591185 591199 AAGACAGATTGAAAA CACAGTAAC GAA GTCACTGCG CTTTAGAAGCGTGAG pmbA 590055 - 591230 + | antibiotic maturation protein (pmbA) AF0657 591660 - 591223 - | hypothetical protein AF0658 593476 - 591632 - | hypothetical protein gspE-2 595008 - 593473 - | type II secretion system protein (gspE-2) AF0660 595329 - 595054 - | hypothetical protein TERM 280 595341 - 595361 + r 83 -9 -4.08394 | gap 1, opp_overlap 595339 595340 CCATAAAAAATCACT GC-TGGGGC TCTC GCCCCACGC TTTTCGCCCACGTGT AF0661 596475 - 595336 - | heterodisulfide reductase, subunit E, putative AF0662 598727 - 596484 - | heterodisulfide reductase, subunit A/methylviologen reducing hydrogenase, subunit delta hdrA-1 599943 - 598729 - | heterodisulfide reductase, subunit A (hdrA-1) AF0664 600077 - 601285 + | hypothetical protein AF0665 601310 - 601897 + | O-sialoglycoprotein endopeptidase, putative AF0666 602211 - 601894 - | hypothetical protein AF0667 602281 - 602466 + | hypothetical protein AF0668 602463 - 602768 + | hypothetical protein AF0669 602804 - 602995 + | 4-oxalocrotonate tautomerase, putative TERM 281 603640 - 603630 - g 70 -2.4 -5.00616 | opp_overlap 603630 603638 GGTCGTTGCAAAAAA CGTC CCT GCCG GTTTGGGTGAGCCGG aroC 602992 - 604074 + | chorismate synthase acd-4 605320 - 604076 - | acyl-CoA dehydrogenase (acd-4) alkK-3 606840 - 605326 - | medium-chain acyl-CoA ligase (alkK-3) merR 607260 - 606868 - | mercuric resistance operon regulatory protein (merR) AF0674 607416 - 607793 + | hypothetical protein todF 607794 - 608510 + | 2-hydroxy-6-oxohepta-2,4-dienoate hydrolase (todF) adk 609153 - 608500 - | adenylate kinase TERM 282 608819 - 608834 + g 72 -4 -4.90079 | opp_overlap 608811, overlap 608821 TCAGGAACAACAACG TTGATG ACGG CATCGA TTTTCTTGTTCAGCT acs-3 611157 - 609226 - | acetyl-CoA synthetase (acs-3) TERM 283 609870 - 609886 + g 76 -11.5 -3.31157 | opp_overlap 609870 TTCCAGGTAAGGGAA GTCCGGC GGA GCCGGGC TTGATGTACTCCTTA TERM 284 610763 - 610785 + g 70 -9.9 -3.22448 | gap 1, overlap 610758 ACGCCAATTCTTGCT GCTGCGAGCA GCAT TGC-CGCAGC TTCGATTGAGTTTGG AF0678 611323 - 611805 + | ISA1083-1 transposase AF0679 611912 - 612337 + | ISA1083-1 transposase glnQ 613092 - 612364 - | glutamine ABC transporter, ATP-binding protein TERM 285 614056 - 614043 - g 70 -2.3 -5.00884 | ACGCTCCTGAAAAAA TGGAG ATAG CGCCA AGGGATGTCGTTTCG sdhA 613238 - 614929 + | succinate dehydrogenase flavoprotein subunit sdhB 614939 - 615649 + | succinate dehydrogenase iron-sulfur subunit sdhC 615651 - 616025 + | succinate dehydrogenase, subunit C (sdhC) sdhD 616018 - 616371 + | succinate dehydrogenase, subunit D (sdhD) fad-2 616512 - 617438 + | enoyl-CoA hydratase (fad-2) AF0686 617431 - 618099 + | hypothetical protein fadD-3 619789 - 618140 - | acyl-CoA synthetase AF0688 620018 - 621124 + | iron-sulfur cluster binding protein AF0689 621197 - 621769 + | hypothetical protein AF0690 622543 - 621785 - | hypothetical protein TERM 286 623490 - 623512 + G 74 -7.7 -4.16842 | GCAACGCCGAGCTCT TCTGCCTGC CTCCA GTGGGCAGA TTTGTTGGCGGTGAC TERM 287 623968 - 623942 - g 82 -11 -3.70902 | TCCGCTACAGCCAAA GACATCGTTTTC ACC GAAAAGGATGTC GAAACTTTGCTTAAA AF0691 622592 - 624349 + | hypothetical protein AF0692 624346 - 625287 + | hypothetical protein boxA 627201 - 625264 - | DNA polymerase I AF0694 627988 - 627416 - | replication control protein A, putative TERM 288 629016 - 629004 - gH 70 -7.7 -3.66874 | TGAAGCTGATTGAAA TCTCC TTC GGAGA AAAGGGGAGAGGCAA cdc6 627965 - 629095 + | cell division control protein 6 minD-1 629186 - 629977 + | cell division inhibitor (minD-1) AF0697 629983 - 630168 + | hypothetical protein AF0698 630398 - 630183 - | hypothetical protein AF0699 631693 - 630377 - | hypothetical protein lysC 633059 - 631671 - | aspartate kinase AF0701 633913 - 633101 - | hypothetical protein thi1 634692 - 633910 - | ribulose-1,5-biphosphate synthetase AF0703 634971 - 634702 - | hypothetical protein AF0704 635010 - 635831 + | hypothetical protein TERM 289 637576 - 637554 - g 71 -7.8 -4.08394 | opp_overlap 637545 ACACCCTCCGGAAAA TCGACGAT AGAGAGA ATCGTCGA AACTCCCGGATTTGA AF0705 635877 - 637649 + | hypothetical protein AF0706 638826 - 637615 - | hypothetical protein TERM 290 638178 - 638166 - Gf 79 -4.8 -5.03145 | CAAGGGCGTAAAAAA GCAG AATTA CTGC GAAGAACCTTATATC TERM 291 639112 - 639096 - gH 72 -4.4 -4.7254 | gap 1, overlap 639098 AGCGTTGAGGAAAAA GATGGGC TAAA GCCCA-C GATAAACATTCTGAC TERM 292 639111 - 639098 - gH 75 -8.1 -3.98256 | overlap 639096 CGTTGAGGAAAAAGA TGGGC TAAA GCCCA CGATAAACATTCTGA TERM 293 639273 - 639292 + GH 72 -3.5 -4.84311 | opp_overlap 639273, overlap 639274 GACATGATTATAAAG GCGGGAA ACGATA TTCCCGA TTTTCTTATCTGGCA AF0707 638799 - 639422 + | hypothetical protein AF0708 639412 - 639876 + | hypothetical protein AF0709 639873 - 640274 + | hypothetical protein ppsA 642532 - 640271 - | phosphoenolpyruvate synthase trx-1 642621 - 642980 + | thioredoxin (trx-1) AF0712 642977 - 643327 + | hypothetical protein hisA-1 643995 - 643324 - | phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (hisA-1) mtd 644069 - 644890 + | F420-dependent methylenetetrahydromethanopterin dehydrogenase AF0715 644887 - 645312 + | potassium channel, putative AF0716 645402 - 645845 + | hypothetical protein TERM 294 646304 - 646286 - gf 76 -5.2 -4.77438 | AGGTAGTAGGAAAAA CCCTAAAG GAG CTCGAGGG TAAGGGTGTGAAGGT AF0717 645817 - 646461 + | hypothetical protein AF0718 646486 - 646626 + | hypothetical protein TERM 295 646693 - 646663 - f 71 -6.8 -4.09739 | TGAATTGCCGCAAAA GATGGTACTGAGCC CAC GGCCCACTACGACC ACACGGGCGGGCTGA AF0719 646708 - 647280 + | hypothetical protein AF0720 647921 - 647277 - | hypothetical protein TERM 296 647412 - 647425 + g 73 -5.2 -4.72631 | overlap 647405 ACCATCTTCACCGCA GGGG TCGATT CCCC TTTTCTTAACTTCAT AF0721 648316 - 647918 - | hypothetical protein cbiE 648906 - 648313 - | cobalt-precorrin-6Y C(5)-methyltransferase cbiD 649756 - 648860 - | cobalt-precorrin-6A synthase cbiH 651077 - 649737 - | cobalamin biosynthesis precorrin-3 methylase (cbiH) cbiG 651801 - 651052 - | cobalamin biosynthesis precorrin methylase (cbiG) TERM 297 651629 - 651615 - GR 73 -8.6 -3.68569 | CGAGGTAGGCAACAA TGCAGT CAT ACTGCA GAACATCATCCCACA cbiF 652453 - 651749 - | cobalamin biosynthesis precorrin-3 methylase (cbiF) cbiL 653055 - 652450 - | cobalamin biosynthesis precorrin-2 methyltransferase (cbiL) TERM 298 653126 - 653116 - H 73 -5.4 -4.57205 | AAAAATTTAAATAAA GTCA ATC TGAC ACAAGCTCAAGAAAT cbiM-1 653156 - 653809 + | cobalt transport protein CbiM TERM 299 653943 - 653907 - g 71 -6.5 -4.254 | opp_overlap 653907 GGAAGAGGTAATAAA GGAGCTTAAGCCAGACT ACG AGCCTTGGTTCAGCCCC ATTTTCGAGCCGCCA cbiN 653806 - 654069 + | cobalt transport protein CbiN TERM 300 654240 - 654253 + GF 73 -3.1 -4.93365 | CTTATGTTAAAATCC TGAGG GTTC CCTTA TTTTTCCTTCTGGCC cbiQ-1 654053 - 654775 + | cobalt transport protein (cbiQ-1) cbiO-1 654673 - 655653 + | cobalt transport ATP-binding protein (cbiO-1) cbiT 655650 - 656141 + | cobalamin biosynthesis precorrin-8W decarboxylase (cbiT) thiL 657028 - 656138 - | thiamine monophosphate kinase (thiL) AF0734 657641 - 656982 - | ribosome biogenesis protein TERM 301 657472 - 657488 + gH 70 -8 -3.74251 | GGCCTGCCCCTCTTT TCCCTG AATTC CAGGGA TTTCATCGCCGTATG AF0735 657692 - 659065 + | hypothetical protein AF0736 659129 - 659416 + | hypothetical protein TERM 302 659560 - 659548 - f 70 -5.5 -4.36411 | opp_overlap 659527, overlap 659527 TAGCAAGGATGAAAA GCTCC TTG AGAGC AATGTCTCCGAAATA AF0737 659635 - 659838 + | hypothetical protein TERM 303 660043 - 660029 - g 73 -2.8 -4.90906 | overlap 660041 660042 CTACAACATTAAAAA GCTTTT CGA AAATGC CGGCATCGCCAACGG AF0738 659976 - 660257 + | hypothetical protein AF0739 660717 - 660229 - | ribosomal protein S18 alanine acetyltransferase AF0740a 660716 - 661102 + | hypothetical protein TERM 304 661311 - 661295 - gfH 72 -10.1 -2.55216 | overlap 661294 661292 GATTATGGAGAAGAT TGCCCCC TAT GGGGACA GCTACGAGCATCACA AF0741 661137 - 661508 + | hypothetical protein TERM 305 662279 - 662265 - gT 77 -10 -3.36518 | TTAAAAGGCTGATAA GGCTTC CGG GAAGCC TTCACGGGAAAACCG AF0742 661427 - 662509 + | DNA primase, putative AF0743 662922 - 662506 - | hypothetical protein TERM 306 663214 - 663202 - RH 74 -4.9 -4.74132 | AGAGGCGATTAAAAA GTTTT CAA AAAAC CCTGATTATCTCCCC AF0744 664903 - 663206 - | GTP-binding protein TERM 307 664536 - 664564 + gH 75 -5.4 -4.7261 | ATTTCGGTGGCAAGC TTTTTCAAAACC TCAAT GGTTTCGGAAAA TTTGTTTTCATCAAT TERM 308 664774 - 664798 + gH 83 -7.3 -4.66833 | opp_overlap 664774 GGATTTTTTCCACAA TTAAATTTCCA TGT TGGGGATTTAA TTTTTCCGATTGGAG TERM 309 665161 - 665137 - gR 70 -8.5 -3.28924 | opp_overlap 665136 665137, overlap 665138 CACCTCTCCTCATAA GCCTCTACGGA CAT TCCGTTGAGGA GTTTTCCGATCTCGT TERM 310 665160 - 665138 - gR 81 -12 -2.57211 | opp_overlap 665137 665136, overlap 665137 ACCTCTCCTCATAAG CCTCTACGGA CAT TCCGTTGAGG AGTTTTCCGATCTCG pyrD 664851 - 665750 + | dihydroorotase dehydrogenase (pyrD) AF0746 666477 - 665728 - | hypothetical protein dapF 667309 - 666467 - | diaminopimelate epimerase AF0748 667357 - 668256 + | hypothetical protein orA 668267 - 669865 + | 2-oxoacid ferredoxin oxidoreductase, subunit alpha (orA) orB 669853 - 670590 + | 2-oxoacid ferredoxin oxidoreductase, subunit beta (orB) AF0751 670572 - 671078 + | hypothetical protein AF0752 671339 - 671070 - | hypothetical protein AF0753 672840 - 671374 - | hypothetical protein TERM 311 671957 - 671946 - G 74 -4.4 -4.81212 | TGTAGGAGAAGAAAA TCAG ACTG CTGA GGAACCAGTAGGCCG AF0754 674227 - 673088 - | hypothetical protein AF0755 676257 - 674293 - | heterodisulfide reductase, subunits E and D, putative TERM 312 675977 - 675963 - G 73 -9.2 -3.68222 | CGGCAATTGTAAGAA CCGCCG TAC CGACGG TAAGGATGGCTACCC TERM 313 677403 - 677390 - g 70 -3.1 -4.78107 | gap 1 GATGAGCAGGAAAAA GCAGGT TGT ACC-GC CCCTCGAAAAAGCCT ppx1 676464 - 677432 + | putative manganese-dependent inorganic pyrophosphatase AF0757 677510 - 678043 + | transcription initiation factor IIE, subunit alpha, putative AF0758 678957 - 678040 - | hypothetical protein TERM 314 678209 - 678199 - G 73 -3.2 -5.00884 | opp_overlap 678206 ACTCCTCTCAAAAAA CCTG CAC CAAG CATCCTTGTTTTCCG AF0759 679742 - 678954 - | hypothetical protein AF0760 682602 - 679723 - | hypothetical protein TERM 315 680424 - 680437 + g 76 -5.3 -4.87273 | TTTTACAAGTGTTGT TGAAG TAGT CTTCA TTTTTGTCGCATGTT TERM 316 681275 - 681249 - G 76 -12.6 -2.57132 | opp_overlap 681249 681253, overlap 681248 681253 TCTCTTCTGTAGAAT TAAATTTAACGA GGA TCGTTAAATTTA TTTGCTTGGGGGCTC TERM 317 681249 - 681275 + g 87 -12.6 -3.90588 | opp_overlap 681248 681249 681253, overlap 681253 TCTCTTCTGTAGAAT TAAATTTAACGA GGA TCGTTAAATTTA TTTGCTTGGGGGCTC TERM 318 681253 - 681271 + g 86 -9 -4.56702 | opp_overlap 681249 681248 681253, overlap 681249 TTCTGTAGAATTAAA TTTAACGA GGA TCGTTAAA TTTATTTGCTTGGGG TERM 319 681271 - 681253 - G 77 -9 -3.9941 | opp_overlap 681253 681249, overlap 681249 681248 TTCTGTAGAATTAAA TTTAACGA GGA TCGTTAAA TTTATTTGCTTGGGG TERM 320 681720 - 681704 - G 74 -7.3 -4.21098 | opp_overlap 681704 AGATGAACTTCAAAA GTCTCTC CCG GAGAAAC GTCTTTTGGCTCGAC TERM 321 682262 - 682274 + g 70 -3.3 -4.8048 | opp_overlap 682262, overlap 682263 CTCGCAGACTCAAAT TCACC CGT GGTGC TTTTTACTCTCACAA AF0761 682900 - 682583 - | hypothetical protein AF0762 683403 - 682888 - | hypothetical protein AF0763 683939 - 683367 - | hypothetical protein rpl7ae 684078 - 684437 + | 50S ribosomal protein L7Ae rps28e 684451 - 684666 + | 30S ribosomal protein S28e rpl24E 684671 - 684847 + | 50S ribosomal protein L24E (rpl24E) ndk 684852 - 685307 + | nucleoside diphosphate kinase (ndk) infB 685304 - 687091 + | translation initiation factor IF-2 trx-2 687100 - 687381 + | thioredoxin (trx-2) AF0770 688944 - 687349 - | signal-transducing histidine kinase AF0771 689491 - 690360 + | hypothetical protein AF0772 691437 - 690388 - | hypothetical protein TERM 322 690997 - 691009 + g 74 -4.9 -4.89339 | opp_overlap 690997 TAAGAAGTCATCATA TTTTG TGC CAAAA TTTTTATCAATAGTT AF0773 691604 - 691416 - | hypothetical protein AF0774 691929 - 691597 - | hypothetical protein AF0775 692687 - 691926 - | hypothetical protein tyrS 692823 - 693794 + | tyrosyl-tRNA synthetase eif1A 693818 - 694084 + | translation initiation factor IF-1A TERM 323 694495 - 694519 + G 71 -7.1 -4.18197 | TTGTTGGAGTTGACG CTGGGGGAGAT GCA ATCTCCGTCGG TTTTGAGTCGGGAGT AF0778 694086 - 695006 + | hypothetical protein AF0779 695689 - 695003 - | hypothetical protein TERM 324 695385 - 695365 - G 73 -5.4 -4.59773 | TCTCACCCTCAAAAA CCCTCACC TTGGC GGTAAGAG CTACGAGAGTTAGAG AF0780 696627 - 695689 - | replication factor A AF0781 696707 - 697636 + | hypothetical protein TERM 325 697705 - 697689 - f 71 -3.7 -4.99134 | overlap 697691 ACTTTAAATCAAAAA TAGCTTC GGT GAAACCA TGGGGATTATAGACA AF0782 697705 - 698073 + | hypothetical protein AF0783 698070 - 698651 + | hypothetical protein AF0784 698888 - 698643 - | hypothetical protein AF0785 699988 - 698960 - | hypothetical protein corA 700953 - 699898 - | magnesium and cobalt transporter (corA) TERM 326 700914 - 700927 + gH 73 -3.1 -4.93968 | overlap 700910 CGGGAGTTGCGGGTG GAAGG GCCA TCTTC TTTTTGATTGTCGCT AF0787 701398 - 702474 + | hypothetical protein AF0788 702402 - 703328 + | hypothetical protein AF0789 703405 - 703731 + | hypothetical protein AF0790 704269 - 703715 - | hypothetical protein TERM 327 705167 - 705147 - g 70 -9.7 -3.21276 | overlap 705145 CCCGTCTCCACAACA TACTGCACC GTC GGTGCGGTA ACTGGAGTTGGGCTC AF0791 704367 - 705311 + | phosphate permease, putative AF0792 706044 - 705274 - | hypothetical protein TERM 328 705722 - 705711 - G 70 -2.2 -4.91712 | overlap 705714 CCCAAGCCATAAAAA CAAC TTCT GTCG GTCTGAAGAAGCCGC AF0794 707622 - 706615 - | hypothetical protein AF0793 706056 - 706679 + | hypothetical protein AF0795 707719 - 708588 + | hypothetical protein AF0796 708595 - 709209 + | hypothetical protein cofG 709245 - 710219 + | FO synthase subunit 1 AF0798 710194 - 711210 + | hypothetical protein AF0799 711837 - 711301 - | hypothetical protein lysA 713084 - 711825 - | diaminopimelate decarboxylase (lysA) rps15p 713574 - 713116 - | 30S ribosomal protein S15P AF0802 713560 - 714204 + | hypothetical protein AF0803 714623 - 714706 + | hypothetical protein AF0804 714703 - 714897 + | hypothetical protein AF0805 715884 - 715207 - | hypothetical protein TERM 329 716019 - 716037 + G 74 -3.8 -4.91109 | opp_overlap 716010 716020, overlap 716020 GCAATAGTTGCAGCA ACACCGAT ACT ATTGGTGC TTTTTCTGATGGCGG TERM 330 716322 - 716298 - g 70 -9.3 -3.55061 | opp_overlap 716298 716301, overlap 716296 716301 GCAGACAGAAGAATA CAGGCAGGAAT AGC ATTCCTGCTCG TTACGTTCTTCGAAG TERM 331 716301 - 716319 + G 74 -11.8 -2.81969 | opp_overlap 716298 716296 716301, overlap 716298 GACAGAAGAATACAG GCAGGAAT AGC ATTCCTGC TCGTTACGTTCTTCG TERM 332 716319 - 716301 - g 73 -11.8 -2.59314 | opp_overlap 716301 716298, overlap 716298 716296 GACAGAAGAATACAG GCAGGAAT AGC ATTCCTGC TCGTTACGTTCTTCG lctP 715998 - 717632 + | L-lactate permease (lctP) lldD 718738 - 717638 - | L-lactate dehydrogenase, cytochrome-type (lldD) TERM 333 719975 - 719962 - gH 74 -3.8 -5.00765 | AATGAAGTACAAAAA GAGC GAGAAA GCTC TGGAAATAATGAGGG glcD 718661 - 720046 + | glycolate oxidase subunit (glcD) TERM 334 720429 - 720419 - g 76 -5.4 -4.76171 | TAAAAAACGAGAAAA CCAA CAA TTGG TGGAAGAAGGTTGAA AF0809 720334 - 721236 + | heterodisulfide reductase, subunit D, putative AF0810 721233 - 721604 + | hypothetical protein AF0811 721601 - 722695 + | hypothetical protein AF0812 722742 - 723638 + | hypothetical protein TERM 335 723660 - 723678 + T 79 -9.6 -3.67775 | opp_overlap 723659 TAAAAAAGCTAAAGC TCGACGTA GGT TGCGTCGA TTATTCCATCAAGCT serA 725236 - 723653 - | D-3-phosphoglycerate dehydrogenase TERM 336 724182 - 724192 + g 79 -5.4 -4.92757 | overlap 724179 AGCTTTCCGCTGCAG GTCA CCT TGAC TTTTCTTATTGCTCC AF0814 725309 - 725806 + | hypothetical protein trm1 725808 - 726857 + | N(2),N(2)-dimethylguanosine tRNA methyltransferase AF0816 728106 - 726850 - | vtpJ-therm, putative AF0817 730055 - 728196 - | hypothetical protein TERM 337 730280 - 730265 - g 100 -10.4 -4.62069 | opp_overlap 730265 730264 GGGTTACGTTAAAAA CCTCCC GGAC GGGAGG GTTTACATATACGCC acyP 730158 - 730427 + | acylphosphatase (acyP) hisF 730427 - 731242 + | imidazole glycerol phosphate synthase subunit HisF AF0820 731239 - 731523 + | hypothetical protein TERM 338 731701 - 731739 + G 76 -5.9 -4.63218 | opp_overlap 731725, overlap 731703 TCAACCTCCTCGAAG GTCTGCCCATTGACGTT TACGC AATGCCAGAGGGCAGCC TTTTCTTCCCCCACG AF0821 731520 - 732665 + | nicotinate phosphoribosyltransferase braF-2 733473 - 732757 - | branched-chain amino acid ABC transporter, ATP-binding protein (braF-2) braG-2 734200 - 733454 - | branched-chain amino acid ABC transporter, ATP-binding protein (braG-2) braE-2 735183 - 734212 - | branched-chain amino acid ABC transporter, permease protein (braE-2) TERM 339 735021 - 735011 - G 79 -6.8 -4.66953 | overlap 735012 735013 CCAAGACCGTAAAAA GCTC CCT GAGC CAGAGAAGCTTGGCC braD-2 736073 - 735180 - | branched-chain amino acid ABC transporter, permease protein (braD-2) AF0826 736626 - 736222 - | hypothetical protein braC-2 738030 - 736645 - | branched-chain amino acid ABC transporter, periplasmic binding protein (braC-2) TERM 340 737035 - 737049 + g 70 -4.2 -4.64048 | ACCTTCAATCAGCGG GTCCTG AGT CAGAAC TTTGTTTCTGTAATC AF0828 738316 - 738540 + | hypothetical protein AF0829 739132 - 738581 - | hypothetical protein AF0830 739638 - 739129 - | hypothetical protein rr2 740226 - 739654 - | rubrerythrin (rr2) rr1 740804 - 740238 - | rubrerythrin (rr1) TERM 341 740612 - 740625 + g 74 -8.1 -4.08948 | CCTCAACCTCAGACG GCTCG ATAT CGAGC TTCTTTATCAGGTTG dfx 741186 - 740809 - | desulfoferrodoxin (dfx) AF0834 741720 - 741199 - | ferritin, putative AF0835 742061 - 741738 - | hypothetical protein TERM 342 741958 - 741944 - Gg 80 -4.4 -5.1101 | TCAGCATGGAAAAAA TTAAAA AGT TTTTAA TACAACTACTGAATA AF0836 741934 - 742290 + | hypothetical protein pelA 742354 - 743388 + | cell division protein pelota (pelA) trkA 743416 - 744726 + | potassium transporter peripheral membrane component trkH 744723 - 746159 + | TRK potassium uptake system protein (trkH) fadD-4 746285 - 748018 + | long-chain-fatty-acid--CoA ligase (fadD-4) purA 749028 - 748015 - | adenylosuccinate synthetase AF0842 749318 - 749109 - | hypothetical protein TERM 343 749659 - 749644 - g 75 -10.4 -3.40299 | CGAGGAGAGGCAGAA GAGCGG GAAG CCGCTC AGAGTAGAGGAGTGG TERM 344 749687 - 749712 + G 70 -3.3 -4.7497 | TGGGAGCAGATAATG GAGGAGC TGGGAATGGTGC GCTCCTC TTTTTACTCCATGAG AF0843 749384 - 749866 + | hypothetical protein AF0844 750726 - 749845 - | hypothetical protein TERM 345 750148 - 750160 + g 73 -10.5 -3.21099 | TTCTATCTTCTTCAT CCCCG CTT CGGGG TTGCTCATCGCGAGA acd-5 751906 - 750761 - | acyl-CoA dehydrogenase (acd-5) nhe2 753464 - 751980 - | Na+/H+ antiporter (nhe2) guaB-1 753577 - 754146 + | inosine monophosphate dehydrogenase (guaB-1) TERM 346 754932 - 754948 + G 73 -8.7 -3.78934 | opp_overlap 754932 CTCTATGCTGGAAAA GGGTTAC GGA GTAGCCC TTATTGTGGAAAACG AF0848 754171 - 755025 + | hypothetical protein AF0849 755022 - 756158 + | hypothetical protein AF0850 756160 - 757173 + | hypothetical protein AF0851 758580 - 757186 - | hypothetical protein TERM 347 758899 - 758917 + GH 74 -5.2 -4.70659 | overlap 758900 GCCAATTTCCGGTGT TGTTGCGA ACC TCGCAGCC TTTTTCGCTCTGACA TERM 348 758900 - 758916 + GH 70 -8.7 -3.41913 | overlap 758899 CCAATTTCCGGTGTT GTTGCGA ACC TCGCAGC CTTTTTCGCTCTGAC glyA 758540 - 759895 + | serine hydroxymethyltransferase AF0853 759892 - 760845 + | proliferating-cell nucleolar antigen P120, putative AF0854 760842 - 761228 + | hypothetical protein mdhA 761263 - 762147 + | L-malate dehydrogenase, NAD+-dependent (mdhA) AF0856 762169 - 763044 + | hypothetical protein AF0857 763223 - 763080 - | ISA1214-4 transposase AF0859 765208 - 764087 - | hypothetical protein AF0858 763290 - 764258 + | ISA1214-4 transposase TERM 349 764579 - 764597 + gT 86 -8.2 -4.62069 | GTTACCGAACATCTC GTAGTACT TTG AGTACTGC TTTTTCCAGTAAAGG AF0860 765474 - 765205 - | hypothetical protein hps-1 765548 - 766846 + | bifunctional hexulose-6-phosphate synthase/ribonuclease regulator AF0862 768454 - 767006 - | hypothetical protein TERM 350 767647 - 767663 + g 79 -9.4 -4.23647 | opp_overlap 767647 TCGGGGCGCATGCAA GCTGCC TGTCT GGCAGC TTTATTCCATACTTT AF0863 769344 - 768451 - | hypothetical protein AF0864 769717 - 769337 - | hypothetical protein est-1 770524 - 769724 - | carboxylesterase (est-1) glpK 772054 - 770576 - | glycerol kinase (glpK) AF0867 773037 - 772051 - | reductase, putative AF0868 774377 - 773034 - | alkyldihydroxyacetonephosphate synthase AF0869 774700 - 774374 - | hypothetical protein AF0870 774861 - 774700 - | hypothetical protein gpsA 775889 - 774882 - | glycerol-3-phosphate dehydrogenase (NAD(P)+) (gpsA) AF0872 775953 - 776147 + | hypothetical protein purF 777525 - 776152 - | amidophosphoribosyltransferase (purF) TERM 351 777376 - 777363 - G 74 -8.1 -4.07568 | opp_overlap 777373 CCTCGTCGTTGAAAA CCTCG GTGA CGAGG CCCATGCCCCTCTTC rpl37e 777705 - 777526 - | 50S ribosomal protein L37e AF0875 777938 - 777705 - | small nuclear ribonucleoprotein nt5 778265 - 780019 + | 5'-nucleotidase (nt5) AF0877 780113 - 780526 + | hypothetical protein TERM 352 780671 - 780655 - T 76 -3.6 -5.1861 | overlap 780657 TTTATCACCAAAAAA TACCGG GCCCG CCGGGA ATTGAACCCGGGTCG TERM 353 780669 - 780657 - T 71 -6.2 -4.22314 | overlap 780655 TATCACCAAAAAATA CCGG GCCCG CCGG GAATTGAACCCGGGT AF0878 781308 - 780715 - | hypothetical protein AF0879 782447 - 781323 - | hypothetical protein TERM 354 782182 - 782202 + g 79 -5.4 -4.93547 | GTTTTGAAGCTTTCG GGCAGC ACACTTAAA GCTGCC TTTTTAATTGATTCA rd-1 782510 - 782671 + | rubredoxin (rd-1) TERM 355 784518 - 784505 - T 74 -3.8 -5.1166 | GAGCAAAATCAAAAA GCTC GAAAAA GAGC TTAGAAGGCTGGCAG TERM 356 785548 - 785577 + T 93 -12.9 -3.409 | opp_overlap 785546, overlap 785546 GCAGAGGCTAATACT GTGTCGTCGGC TCTATTTC GCCGGCGACAC TCTTCTTCACCATTT asnA 786796 - 785540 - | glutamyl-tRNA(Gln) amidotransferase subunit D argH 788210 - 786759 - | argininosuccinate lyase (argH) AF0884 788282 - 788563 + | hypothetical protein hpaA-2 790115 - 788730 - | 4-hydroxyphenylacetate-3-hydroxylase (hpaA-2) ahcY-1 791144 - 790164 - | S-adenosyl-L-homocysteine hydrolase TERM 357 791779 - 791789 + G 76 -3.2 -5.07567 | TCTCACACCTCAGGA GGTT GAC AGCC TTTTTTACGCTCTGA rbsA-1 791273 - 792760 + | ribose ABC transporter, ATP-binding protein (rbsA-1) rbsC-1 792757 - 793755 + | ribose ABC transporter, permease protein (rbsC-1) rbsC-2 793757 - 794689 + | ribose ABC transporter, permease protein (rbsC-2) AF0890 794667 - 795860 + | hypothetical protein AF0891 796141 - 795866 - | hypothetical protein AF0892 796340 - 796978 + | hypothetical protein AF0893 797993 - 796989 - | signal-transducing histidine kinase TERM 358 798209 - 798239 + H 78 -11.1 -3.01712 | gap 1 GAGGGCCGGCGGTTA TGGCCGGGCTGCCC GGAG GGGCTGTCCG-CCA TATTAGCCGGGGGGA argS 798418 - 800067 + | arginyl-tRNA synthetase AF0895 800663 - 800944 + | transposase IS240-A AF0896 801230 - 802339 + | hypothetical protein AF0897 802346 - 803443 + | hypothetical protein AF0898 804145 - 803984 - | hypothetical protein TERM 359 805005 - 804987 - g 70 -4.4 -4.70879 | overlap 804988 TTGAAATTGCAAAAA TGGCCGAC GAG GTTGGCCT GAAGAGGGAGAAGGT AF0899 804482 - 805306 + | hypothetical protein endA 805316 - 806233 + | tRNA splicing endonuclease TERM 360 806652 - 806639 - g 78 -2.4 -5.28176 | TTCAGGGATAAAAAA CCTT GGCAAA AAGG TGGGGGCCGTGCACT AF0901 806253 - 806762 + | NTPase AF0902 806759 - 807571 + | hypothetical protein AF0903 807592 - 808089 + | hypothetical protein TERM 361 808341 - 808330 - g 73 -3 -5.00616 | GCGTCCTCGAAAAAA CAAT CTGG ATTG TTGCCCATCTTGACG TERM 362 809182 - 809164 - g 74 -7.4 -4.25104 | opp_overlap 809149 809148 CGTTTTTCAGGAAAA GCGGTTTC ACC GAAACTGC TGCATGGTGCACCGC dapE-2 808086 - 809297 + | succinyl-diaminopimelate desuccinylase AF0905 809668 - 809294 - | hypothetical protein TERM 363 809422 - 809438 + g 70 -4.3 -4.62471 | overlap 809424 TTCCGTAAGTTTTCA GAGCTTC TAC GAGGCCC TTTTCTATCTCCATT hyuA 811139 - 809655 - | hydantoin utilization protein A (hyuA) AF0907 812431 - 811172 - | hypothetical protein TERM 364 811210 - 811198 - G 79 -5.5 -5.0065 | CATGGACAAATAAAA TCAGC ACC GCCGA AACCACTGATGCAGC AF0908 812489 - 813244 + | hypothetical protein dapB 814021 - 813248 - | dihydrodipicolinate reductase (dapB) dapA 814922 - 814053 - | dihydrodipicolinate synthase rps17E 815112 - 814915 - | SSU ribosomal protein S17E (rps17E) AF0912 816834 - 815137 - | hypothetical protein AF0913 817224 - 816886 - | hypothetical protein AF0914 817369 - 817674 + | translation initiation factor Sui1 AF0915 818104 - 817649 - | hypothetical protein glyS 818164 - 819876 + | glycyl-tRNA synthetase TERM 365 820557 - 820515 - g 72 -4 -4.87665 | opp_overlap 820522, overlap 820526 GTTGAGGGACAAAAA GGTTATAGCAATCTCCCCCA TAG TGGGAGAGAAGGCTGTTAGC GGTCCGGCGGGGAAG TERM 366 820546 - 820526 - g 79 -11.9 -3.29109 | opp_overlap 820522, overlap 820515 AAAAGGTTATAGCAA TCTCCCCCA TAG TGGGAGAGA AGGCTGTTAGCGGTC AF0917 819880 - 820770 + | LPPG:FO 2-phospho-L-lactate transferase act-2 820767 - 821618 + | pyruvate formate-lyase activating enzyme (act-2) AF0919 821649 - 822104 + | hypothetical protein aspC 822141 - 823433 + | aspartyl-tRNA synthetase AF0921 824152 - 823430 - | hypothetical protein AF0922 824584 - 824168 - | hypothetical protein fdx-5 824802 - 824978 + | ferredoxin (fdx-5) TERM 367 825041 - 825051 + T 71 -6.8 -4.13767 | opp_overlap 825041 ATTTGTAGCCAATCA GCCA ATC TGGC TTTTCGGGTAAGGAA AF0924 825611 - 825024 - | hypothetical protein AF0925 826584 - 825637 - | hypothetical protein AF0926 826572 - 827105 + | hypothetical protein AF0927 827661 - 827095 - | hypothetical protein AF0928 828486 - 827854 - | hypothetical protein AF0929 829153 - 828428 - | hypothetical protein TERM 368 828999 - 829012 + gH 79 -6.7 -4.60041 | TCAGCAACTTTTTTG GCGAT TTCC ATCGC TTTTTCACCATCCAT moeA-2 829159 - 830403 + | molybdenum cofactor biosynthesis protein (moeA-2) TERM 369 831530 - 831542 + G 73 -9.1 -3.75153 | CGGTTCTTACAGCGG GGCTG TCA CAGCC TTTGCCTTCACCGAC moeA-1 830400 - 832364 + | molybdenum cofactor biosynthesis protein (moeA-1) AF0932 832406 - 834406 + | hypothetical protein ilvE 834429 - 835301 + | branched-chain amino acid aminotransferase AF0934 835294 - 835809 + | hypothetical protein hom 835806 - 836786 + | homoserine dehydrogenase AF0936 836770 - 837492 + | hypothetical protein tuf 837550 - 838821 + | elongation factor 1-alpha rps10p 838843 - 839163 + | 30S ribosomal protein S10P AF0939 839164 - 840084 + | ribonuclease Z top6A 841163 - 840081 - | DNA topoisomerase VI subunit A TERM 370 841323 - 841311 - g 73 -2.7 -4.95155 | TTTAGACCAGAAAAA CATCT TTG AAATG TTCAGGAGTGACTGC AF0941 841216 - 841560 + | hypothetical protein surE 841557 - 842342 + | stationary phase survival protein SurE rpi 842320 - 842997 + | ribose 5-phosphate isomerase (rpi) AF0944 844147 - 843002 - | hypothetical protein TERM 371 843811 - 843851 + gT 73 -6.9 -4.1552 | gap 1 GATGCTTCTTCCCGT CCTTGAACTCCACGGTGA CGGTAA TTGCCGAGGAGT-CGAGG TTTGTTAAAAAGGTG AF0945 845321 - 844116 - | hypothetical protein AF0946 848498 - 845388 - | hypothetical protein TERM 372 845558 - 845578 + g 72 -8.3 -3.90241 | overlap 845552 TTGTGGTTGTAACGG CAGTCGTGG TTG TTACGACTG TTGTTGTAGTTGGTG AF0947 849177 - 848779 - | hypothetical protein AF0948 849589 - 849146 - | hypothetical protein glnA 851144 - 849669 - | glutamine synthetase (glnA) TERM 373 850248 - 850238 - G 70 -4.6 -4.60487 | opp_overlap 850245 CAGGATCTGCAAAAA CAGC CTC GCCG CTGAAGGGCTCTCCC cooF 851322 - 851795 + | carbon monoxide dehydrogenase, iron sulfur subunit (cooF) noxA-4 851792 - 853081 + | NADH oxidase (noxA-4) AF0952 853078 - 854214 + | hypothetical protein TERM 374 854818 - 854796 - g 70 -8.4 -3.67296 | opp_overlap 854796 854795 TATCAGGCATTCAAA TCCCTTGCGA TGG CCGCAAGCGA GTTTGGTACGCTTTT gltB 854211 - 855746 + | glutamate synthase (gltB) AF0954 855743 - 856585 + | hypothetical protein AF0955 857700 - 856621 - | hypothetical protein AF0956 857869 - 857690 - | hypothetical protein TERM 375 859111 - 859092 - g 70 -4.2 -4.59773 | gap 1 CTTCAGCGGTAAAAA CGTCATGCC GAT GGCAAG-CG TGAAGCTCAAAATCG leuA-1 857923 - 859392 + | 2-isopropylmalate synthase (leuA-1) braG-3 860065 - 859400 - | branched-chain amino acid ABC transporter, ATP-binding protein (braG-3) braF-3 860681 - 860043 - | branched-chain amino acid ABC transporter, ATP-binding protein (braF-3) braE-3 861522 - 860665 - | branched-chain amino acid ABC transporter, permease protein (braE-3) braD-3 862235 - 861510 - | branched-chain amino acid ABC transporter, permease protein (braD-3) braC-3 863395 - 862223 - | branched-chain amino acid ABC transporter, periplasmic binding protein (braC-3) TERM 376 862930 - 862916 - G 70 -10 -3.28791 | ATCTGGCTTCGATAA GCTGAG AAA CTCAGC AGCCAGAACACCCCA fad-3 864171 - 863392 - | enoyl-CoA hydratase (fad-3) TERM 377 863584 - 863599 + g 80 -3.2 -5.30155 | GGGAGACTTGCTCTT GATGAC CTCT GCCATC TTTTTTGCTTCATCC TERM 378 863737 - 863773 + g 70 -9.3 -3.52204 | CACTATCCTGGCAAG CCTCTGCGTTCCTCCCG CTC CGGGAATGATGCCGAGG TTAATTTCAGGCTGA acd-6 865360 - 864176 - | acyl-CoA dehydrogenase (acd-6) AF0965 865842 - 865378 - | hypothetical protein TERM 379 865669 - 865693 + g 82 -7.8 -4.67234 | overlap 865671 CTCGCAGTAGATGCG GGGCGGGAAG TAAAC CTTTCCGCAC TTTTTGCACTTCGCT AF0966 866375 - 865845 - | hypothetical protein acaB-9 867582 - 866380 - | acetyl-CoA acetyltransferase acaB-10 868759 - 867593 - | acetyl-CoA acetyltransferase TERM 380 867928 - 867951 + g 76 -11 -3.22102 | overlap 867924 867926 CAAAGTCCACCTCCT TGGCGGGATT GGCT ATTCCCGCCA TCTTGTAGGCCATCT putP-2 870560 - 868965 - | proline permease (putP-2) AF0970 870820 - 870560 - | hypothetical protein TERM 381 871762 - 871752 - g 74 -4.6 -4.89729 | CAGAAAACTGAAAAA GGCC AAG AGCC TCGAAGAAATAAAAA TERM 382 872256 - 872245 - g 74 -4.4 -4.81551 | opp_overlap 872245 TACGGAGACGAAAAA CTCT GCAA AGAG TTGATTGAGCACATC AF0971 870922 - 872724 + | hypothetical protein TERM 383 872807 - 872796 - g 87 -4.4 -5.42265 | TTAAACCAGAAAAAA GATG AAAT CATC GCAATAGGAGCAGTC dnaQ 872724 - 873341 + | DNA polymerase III, subunit epsilon (dnaQ) baiF-1 873450 - 874760 + | bile acid-inducible operon protein F (baiF-1) TERM 384 875223 - 875209 - g 71 -5 -4.44046 | opp_overlap 875209 GGCATCTGAAAGAAA TCAATC CCG GACTGA TTTACTGTGCTGTAA TERM 385 875755 - 875734 - g 77 -8.7 -4.02535 | CCACAATCAAGGAAA GGCTGACTC CAGA GAACCAGCC CAAGATTCAGCATGA baiF-2 874770 - 876122 + | bile acid-inducible operon protein F (baiF-2) acs-4 876137 - 878065 + | acetyl-CoA synthetase (acs-4) acs-5 878070 - 879725 + | acetyl-CoA synthetase (acs-5) TERM 386 879727 - 879748 + F 90 -3.1 -6.04324 | overlap 879729 879738 AGCAGAGTAGCTGAT TTTTCTTTT TTTA AAAAGAATA TTTTTTATTTTTTGA TERM 387 879729 - 879746 + F 73 -5.7 -4.6155 | overlap 879727 879738 CAGAGTAGCTGATTT TTCTTTT TTTA AAAAGAA TATTTTTTATTTTTT TERM 388 879738 - 879755 + F 73 -2.1 -5.22312 | overlap 879729 879727 TGATTTTTCTTTTTT TAAAAAG AATA TTTTTTA TTTTTTGATGTCGAT amt-1 879899 - 881074 + | ammonium transporter (amt-1) glnB-1 881052 - 881414 + | nitrogen regulatory protein P-II (glnB-1) proW-1 882025 - 881411 - | osmoprotection protein (proW-1) proW-2 882674 - 882018 - | osmoprotection protein (proW-2) proV 883756 - 882671 - | osmoprotection protein (proV) proX 884631 - 883753 - | osmoprotection protein (proX) TERM 389 883898 - 883925 + g 72 -8.4 -3.81 | ACTGAAATCAGCTTC TCGTCCTTGGCA GTGT TGCCATTGACGA TTATTATCGCATCGT TERM 390 884866 - 884853 - R 80 -4.5 -5.20606 | AAAGATGAAGAAAAA CCCCA CTTA TGGAG CAATTATACAACATT AF0983 885858 - 885172 - | hypothetical protein AF0984 886444 - 885791 - | ABC transporter, ATP-binding protein hisB 886989 - 886453 - | imidazoleglycerol-phosphate dehydrogenase/histidinol-phosphatase (hisB) hisA-2 887692 - 886976 - | phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (hisA-2) AF0987 888115 - 887723 - | hypothetical protein bcsp31-3 888225 - 889268 + | immunogenic protein (bcsp31-3) AF0989 889283 - 891214 + | hypothetical protein caiB-2 892204 - 891233 - | L-carnitine dehydratase (caiB-2) gcdH 893603 - 892416 - | glutaryl-CoA dehydrogenase (gcdH) TERM 391 892964 - 892976 + g 70 -3.3 -4.78597 | overlap 892965 CGCCCACACTTCCAG CCCTC ATC GAGGC TTTCTTTGTTATTGC TERM 392 893804 - 893783 - H 71 -6 -4.23104 | GTAAATCCTAATAAA GCTTTAAA TTTGCT TTTAAAGC CTCAAATCCGAAAGT AF0992 893864 - 894667 + | hypothetical protein TERM 393 894659 - 894691 + T 76 -3.6 -5.26155 | overlap 894664 GTGGAGGAGGTTGTT GAGGAGTAAAAAAT TATTT ATTTTTTCCTTTTC TTTTTGTCTTTCTCT TERM 394 894664 - 894686 + T 76 -2.1 -5.40873 | overlap 894659 GGAGGTTGTTGAGGA GTAAAAAAT TATTT ATTTTTTCC TTTTCTTTTTGTCTT radA 895689 - 894676 - | DNA repair and recombination protein RadA AF0995 898192 - 896237 - | hypothetical protein AF0994 895745 - 896302 + | hypothetical protein TERM 395 897767 - 897779 + gT 76 -5.5 -4.79053 | GAAGATAATCGCATG CGGGA GAA TCCTG TTTATTTTGCTCTTT TERM 396 897965 - 897953 - GT 70 -7.7 -3.63694 | ACGGATGTTGAAGAA TGGTG GCA CACCA ACGTACTTAACGAGT gspE-3 899903 - 898194 - | type II secretion system protein (gspE-3) TERM 397 899870 - 899893 + g 73 -5.4 -4.70626 | overlap 899869 899874 899881 CCTGCTCTTTTCCCC TGAATTTCAG TTGC CTGAAATTGA TTTTTGGCATTGTTA trzA-2 901214 - 899964 - | N-ethylammeline chlorohydrolase (trzA-2) AF0998 901286 - 902062 + | hypothetical protein AF0999 902711 - 902055 - | hypothetical protein nadE 903451 - 902708 - | NAD synthetase AF1001 904093 - 903509 - | hypothetical protein AF1002 904618 - 904163 - | hypothetical protein TERM 398 905249 - 905238 - g 70 -3 -4.85599 | GGGACTGGAGAAAAA TTTC CGAT GAAA CAGGGATAGAGGCCG AF1003 904694 - 905329 + | hypothetical protein AF1004 906899 - 905331 - | hypothetical protein TERM 399 906383 - 906371 - G 70 -2.6 -4.9218 | GAGTTAGCAGAAAAA CCCG CAGCT CAGG CTTTGCCTCCTCAAG TERM 400 906888 - 906878 - G 83 -5.4 -5.1286 | GAAAAAGCACAAAAA GCTT TCT AAGC ATGCGAACCACCTCC AF1005 907983 - 906883 - | ABC transporter, ATP-binding protein, putative AF1006 908833 - 907976 - | ABC transporter, ATP-binding protein AF1007 909186 - 910040 + | hypothetical protein TERM 401 910315 - 910302 - f 74 -5.3 -4.66537 | overlap 910304 GTCCTGAAGACAAAA TAGCT TGTA AGCTA GCGCTGGAAAAACTT AF1008 910397 - 910708 + | hypothetical protein AF1009 910972 - 911715 + | hypothetical protein TERM 402 911791 - 911813 + G 70 -4.8 -4.70626 | TGGATGCAAGGTATG CGAGGAAG TCTGCCC CTTCCACG TTTTTGAAGTTATTG fdx-6 911747 - 911929 + | ferredoxin (fdx-6) AF1011 911944 - 912936 + | hypothetical protein AF1012 912920 - 913858 + | hypothetical protein AF1013 914265 - 913855 - | hypothetical protein TERM 403 914235 - 914221 - G 79 -5.6 -5.00267 | AATGATAAAAACAAA GAAGGC GAT GCCTGC TGACATTAAAAAATC ilvD 915892 - 914249 - | dihydroxy-acid dehydratase (ilvD) TERM 404 915402 - 915418 + g 74 -6.5 -4.39002 | overlap 915404 GCCTTGTACATCCCC GCTGCCT CAA AGGCATC TTTTATGGAGACTTT AF1015 916019 - 916501 + | hypothetical protein AF1016 916471 - 916935 + | hypothetical protein AF1017 918072 - 916939 - | hypothetical protein AF1018 918739 - 918053 - | ABC transporter, ATP-binding protein TERM 405 918313 - 918350 + g 76 -7 -4.57569 | GCCCTCCGCTCATCT CGTTGGGCTTGCGG TTCATCTCCT TCTCAAGCCCGACG TTTTTCAGAAGCTCC AF1019 920115 - 918736 - | hypothetical protein AF1020 920643 - 920146 - | hypothetical protein AF1021 920701 - 921528 + | ABC transporter, ATP-binding protein mopB 921542 - 921925 + | molybdenum-pterin-binding protein (mopB) chlP-2 923016 - 921922 - | bacteriochlorophyll synthase, 43 kDa subunit (chlP-2) TERM 406 922078 - 922068 - G 74 -6.8 -4.37886 | opp_overlap 922068 CCATTGCCGAGAAAA GCTG CTC CAGC TTTTCGTCAGGAAGA TERM 407 922068 - 922078 + g 71 -6.8 -4.25104 | opp_overlap 922068 CCATTGCCGAGAAAA GCTG CTC CAGC TTTTCGTCAGGAAGA TERM 408 922478 - 922468 - G 79 -6.8 -4.62069 | GGCGTAGGCGAAAAA GGAG TCG CTCC AGTTCCCGCCAAAGT TERM 409 922570 - 922558 - G 93 -9.1 -5.0133 | opp_overlap 922546 GACTGCGGTAAAAAA CCCCA TTG TGGGG AAGCCGAAGTGCTCT top-RG 923067 - 926231 + | reverse gyrase hbd-4 927349 - 926228 - | 3-hydroxyacyl-CoA dehydrogenase (hbd-4) acd-7 927500 - 928693 + | acyl-CoA dehydrogenase (acd-7) hpaA-3 930179 - 928737 - | 4-hydroxyphenylacetate-3-hydroxylase (hpaA-3) fadA-1 931415 - 930225 - | acetyl-CoA acetyltransferase fadD-5 933201 - 931420 - | long-chain-fatty-acid--CoA ligase (fadD-5) AF1030 933395 - 934978 + | hypothetical protein TERM 410 936290 - 936256 - g 100 -7.2 -5.33921 | overlap 936257 936272 936273 AAATCAACGAAAAAA GCCAGAAAGCCAAAAA CCC TCCTCGACTTTCTGGG GGTGGAGGAGGAATG TERM 411 936289 - 936257 - g 80 -10.7 -3.77912 | overlap 936256 936272 936273 AATCAACGAAAAAAG CCAGAAAGCCAAAAA CCC TCCTCGACTTTCTGG GGGTGGAGGAGGAAT TERM 412 936302 - 936272 - g 74 -4.7 -4.84529 | overlap 936257 936256 936273 CCAGAAAGCCAAAAA CCCTCCTCGAC TTTCTGGGG GTGGAGGAGGA ATGATTCTGCTCAAG rad32 934975 - 936306 + | DNA repair protein RAD32 (rad32) TERM 413 937870 - 937857 - g 79 -6.7 -4.60487 | overlap 937859 CATGACGCTGAAAAA CTCTC TGCG GAGAG CGAAGAGTACAGAAA AF1032 936303 - 938963 + | chromosome segregation protein AF1033 938947 - 940062 + | hypothetical protein tlpC-1 942121 - 940088 - | methyl-accepting chemotaxis protein (tlpC-1) TERM 414 940285 - 940298 + g 72 -3.7 -4.83722 | CTGCTGAGGTTTCCT CGCTG CTCG CTGCG TTTTCTTCTGCTGTT TERM 415 941991 - 941978 - G 76 -4.5 -4.99861 | GATGAAGTAGAAAAA TACCG GCTT CGGCA CACTCCTGATCAAGG AF1035 943500 - 942211 - | chemotaxis histidine kinase, putative TERM 416 942949 - 942939 - G 76 -6.8 -4.52589 | opp_overlap 942939 TTTCCTGAGAGAAAA GCTC ACT GAGC TTTTTTCCGATGATG TERM 417 942939 - 942949 + g 91 -6.8 -5.06451 | opp_overlap 942939 TTTCCTGAGAGAAAA GCTC ACT GAGC TTTTTTCCGATGATG AF1036 943504 - 944352 + | chemotaxis histidine kinase, putative cheR 945181 - 944369 - | chemotaxis protein methyltransferase (cheR) AF1038 945645 - 945172 - | hypothetical protein AF1039 946262 - 945645 - | hypothetical protein cheA 948216 - 946246 - | chemotaxis histidine kinase (cheA) cheB 949255 - 948206 - | chemotaxis-specific methylesterase TERM 418 948778 - 948791 + g 70 -2.3 -4.91473 | opp_overlap 948779, overlap 948779 TAGAGGAACCAATTA AGACG CACA CGTCC TTTGTTTTTCCCTTC cheY 949623 - 949258 - | chemotaxis response regulator (cheY) TERM 419 949579 - 949550 - G 79 -8.7 -4.19238 | gap 1, opp_overlap 949550 949551, overlap 949551 CCGGCAATGTCAAAA CCTCCTGA-GAACA GTA TGTTCCTCAGGAGC TTTCTCATAAACGCC TERM 420 949550 - 949579 + g 75 -8.7 -3.96148 | gap 1, opp_overlap 949550 949551, overlap 949551 CCGGCAATGTCAAAA CCTCCTGA-GAACA GTA TGTTCCTCAGGAGC TTTCTCATAAACGCC TERM 421 949551 - 949578 + g 76 -12.2 -2.97475 | gap 1, opp_overlap 949550 949551, overlap 949550 CGGCAATGTCAAAAC CTCCTGA-GAACA GTA TGTTCCTCAGGAG CTTTCTCATAAACGC TERM 422 949578 - 949551 - G 77 -12.2 -3.11222 | gap 1, opp_overlap 949551 949550, overlap 949550 CGGCAATGTCAAAAC CTCCTGA-GAACA GTA TGTTCCTCAGGAG CTTTCTCATAAACGC AF1043 950437 - 949628 - | hypothetical protein cheW 950933 - 950451 - | purine-binding chemotaxis protein (cheW) tlpC-2 953451 - 950947 - | methyl-accepting chemotaxis protein (tlpC-2) TERM 423 951144 - 951157 + g 72 -3.7 -4.83722 | CTGCTGAGGTTTCCT CGCTG CTCG CTGCG TTTTCTTCTGCTGTT TERM 424 953253 - 953266 + g 74 -2.4 -5.1417 | GAATCTGCCTTACCA GTTC TCTGAC GAAC TTTTTGGTTTTCTCC AF1046 954209 - 953538 - | hypothetical protein AF1047 954850 - 954206 - | hypothetical protein AF1048 956489 - 954864 - | flagellar assembly protein J gspE-4 958379 - 956493 - | type II secretion system protein (gspE-4) TERM 425 958142 - 958153 + g 71 -5.8 -4.36914 | GCTTCGGAGCGAATT TCGG AATT CCGA TTTTGTCGAGGGGGA AF1050 959216 - 958482 - | flagellar accessory protein FlaH TERM 426 959256 - 959241 - R 73 -5.4 -4.49756 | overlap 959243 TCCTAAACACTAAAA TCTGCG CTGT CGCAAA CCGCATTCGGAGTGC AF1051 959713 - 959228 - | hypothetical protein AF1052 960195 - 959707 - | hypothetical protein TERM 427 960158 - 960120 - G 80 -9.6 -4.08692 | opp_overlap 960143, overlap 960123 960129 TAACTGCGGGCAAAA TAACCATAATGGCAGCGG TAA CCGCTACCACCGTAGCTA TCATCAGGATCGATG TERM 428 960155 - 960123 - G 79 -9.1 -4.17048 | opp_overlap 960143, overlap 960120 960129 CTGCGGGCAAAATAA CCATAATGGCAGCGG TAA CCGCTACCACCGTAG CTATCATCAGGATCG TERM 429 960149 - 960129 - G 90 -13.3 -3.68416 | opp_overlap 960143, overlap 960123 960120 GCAAAATAACCATAA TGGCAGCGG TAA CCGCTACCA CCGTAGCTATCATCA AF1053 961037 - 960228 - | hypothetical protein flaB1-1 961683 - 961072 - | flagellin (flaB1-1) flaB1-2 962311 - 961688 - | flagellin (flaB1-2) AF1056 963289 - 962423 - | hypothetical protein TERM 430 962719 - 962747 + gr 86 -4.5 -5.37043 | overlap 962720 AATGCACCTTTTTCC AGCTCTTTCCG CATTCAA CGGCAAGAGCC TTTTTTATGTGCCCT TERM 431 962720 - 962746 + gr 73 -8 -3.81141 | overlap 962719 ATGCACCTTTTTCCA GCTCTTTCCG CATTCAA CGGCAAGAGC CTTTTTTATGTGCCC ccdA 963576 - 963004 - | cytochrome C-type biogenesis protein (ccdA) AF1058 963972 - 963616 - | hypothetical protein AF1059 964266 - 964442 + | hypothetical protein TERM 432 965437 - 965450 + G 70 -8.1 -3.80625 | opp_overlap 965433 CGATCCCAACAGCCT CGTGC AGAA GCACG TTTGCATTCTCGCAA AF1060 965024 - 966541 + | hypothetical protein AF1061 967452 - 966538 - | hypothetical protein AF1062 967982 - 967449 - | hypothetical protein AF1063 968496 - 968092 - | response regulator AF1064 970377 - 968515 - | ABC transporter, ATP-binding protein, putative AF1065 970429 - 970755 + | hypothetical protein mer-1 970813 - 971811 + | methylenetetrahydromethanopterin reductase AF1067 972044 - 972313 + | chromatin protein AF1068 972329 - 972766 + | hypothetical protein panF-1 974201 - 972726 - | pantothenate permease (panF-1) TERM 433 973002 - 972992 - G 70 -8.2 -3.8062 | opp_overlap 972992 CAATCTCGACAATAA CCCC CAT GGGG TTGATTGCAAAGATT ftsA-1 975533 - 974292 - | coenzyme F390 synthetase (ftsA-1) TERM 434 975135 - 975156 + g 77 -9.5 -3.72051 | overlap 975124 CCACAGTCCGAAGGC GGGCGTAAT CTGA ATTACGTCC TTTGAGGTTATTCCC AF1071 975629 - 975907 + | hypothetical protein AF1072 976401 - 976192 - | hypothetical protein AF1074 977153 - 976959 - | hypothetical protein AF1075 977525 - 977247 - | hypothetical protein AF1076 977698 - 977510 - | hypothetical protein AF1077 978230 - 977838 - | hypothetical protein AF1078 978351 - 978214 - | hypothetical protein AF1079 978434 - 978348 - | hypothetical protein AF1080 978715 - 978455 - | hypothetical protein AF1081 978881 - 978708 - | hypothetical protein AF1084 979630 - 979439 - | hypothetical protein AF1086m 980157 - 979723 - | hypothetical protein AF1087 980351 - 980154 - | hypothetical protein AF1088 980874 - 980677 - | hypothetical protein AF1089 981451 - 981026 - | hypothetical protein AF1090 981627 - 981448 - | hypothetical protein AF1091 982090 - 981671 - | hypothetical protein AF1092 982259 - 982074 - | hypothetical protein AF1093 982575 - 982318 - | hypothetical protein AF1094 982790 - 982572 - | hypothetical protein AF1095 983282 - 983094 - | hypothetical protein AF1096 984220 - 983795 - | hypothetical protein manC 985700 - 984354 - | mannose-6-phosphate isomerase/mannose-1-phosphate guanylyl transferase (manC) fum-1 986383 - 985841 - | fumarate hydratase fum-2 987201 - 986383 - | fumarate hydratase cdhA-1 987324 - 989732 + | acetyl-CoA decarbonylase/synthase complex subunit alpha cdhB-1 989729 - 990283 + | acetyl-CoA decarbonylase/synthase complex subunit epsilon AF1102 990317 - 990547 + | hypothetical protein AF1103 990578 - 991126 + | hypothetical protein AF1104 991157 - 992023 + | hypothetical protein AF1105 992020 - 992595 + | hypothetical protein AF1106 992583 - 993044 + | ribosomal biogenesis protein AF1107 993465 - 993025 - | hypothetical protein TERM 435 993330 - 993316 - G 71 -7.1 -4.24342 | GCGCGGAGGAACAAA TCCGC GCAGA GCGGA ATAAATCGAAAAGGC AF1108 994007 - 993501 - | deoxyuridine 5'-triphosphate nucleotidohydrolase AF1109 994371 - 994030 - | hypothetical protein AF1110 994906 - 994355 - | hypothetical protein TERM 436 994564 - 994577 + g 72 -3.8 -4.86773 | opp_overlap 994554, overlap 994555 994554 AAGCATCTTTGAGCA GAGC CTCAAA GCTC TTTTTGCTGATTTTG AF1111 994978 - 995289 + | hypothetical protein gcp 996257 - 995286 - | O-sialoglycoprotein endopeptidase TERM 437 996035 - 996019 - G 79 -11.5 -3.50715 | ACAACTCTGAGACAA GGCCCCA TTC CGGGGCC CTGAGAAAAGGCAAC rps27AE 996421 - 996254 - | SSU ribosomal protein S27AE (rps27AE) rps24E 996768 - 996436 - | SSU ribosomal protein S24E (rps24E) AF1115 997321 - 996761 - | hypothetical protein rpoE2 997506 - 997318 - | DNA-directed RNA polymerase, subunit E'' (rpoE2) rpoE1 998075 - 997506 - | DNA-directed RNA polymerase subunit E' AF1118 998674 - 998138 - | hypothetical protein AF1119 998786 - 999208 + | hypothetical protein AF1120 999227 - 999739 + | hypothetical protein AF1121 999774 - 1000241 + | AsnC family transcriptional regulator hbd-5 1000353 - 1002305 + | 3-hydroxyacyl-CoA dehydrogenase (hbd-5) AF1123 1002383 - 1002598 + | hypothetical protein AF1124 1002574 - 1003053 + | hypothetical protein nirJ-1 1003215 - 1004348 + | heme biosynthesis protein (nirJ-1) AF1126 1004776 - 1004321 - | P450 cytochrome, putative TERM 438 1004549 - 1004575 + g 78 -3.7 -5.14563 | GTCCGTCGCAATCCT GATGTCGGCAA AATCG TTGCAGAGATC TTTTTTCCTCGGCAG rpl18E 1004990 - 1005268 + | 50S ribosomal protein L18e rpl13P 1005279 - 1005749 + | 50S ribosomal protein L13P (rpl13P) rps9p 1005742 - 1006149 + | 30S ribosomal protein S9P TERM 439 1006181 - 1006201 + G 93 -8.3 -5.06414 | opp_overlap 1006173 GAGAAACGAGAATTC CAGCGATTT CCC AATTCGCTG TTTTTCTTGCGGGGC rpoN 1006155 - 1006385 + | DNA-directed RNA polymerase subunit N rpoK 1006461 - 1006688 + | DNA-directed RNA polymerase, subunit K (rpoK) eno 1006797 - 1007897 + | phosphopyruvate hydratase rps2P 1007894 - 1008487 + | 30S ribosomal protein S2 AF1134 1008562 - 1009932 + | hypothetical protein AF1135 1010032 - 1010667 + | hypothetical protein TERM 440 1010661 - 1010678 + F 78 -4.1 -5.27923 | opp_overlap 1010650 1010661, overlap 1010650 AGGAGCTTTCCAAAT TGGGTAA GCTA TTTCCCA TTTTTTCTCAGCTTC AF1136 1010771 - 1011655 + | ABC transporter, ATP-binding protein AF1137 1011652 - 1012545 + | hypothetical protein TERM 441 1013854 - 1013838 - g 71 -6.5 -4.1721 | overlap 1013839 ATGTACACTGTAAAA GCCTCTC CGG GAGAGGA GCTTGAGCTGAAGGG AF1138 1012542 - 1014206 + | hypothetical protein AF1139 1014254 - 1014952 + | ABC transporter, ATP-binding protein TERM 442 1014944 - 1014966 + F 70 -8.4 -3.32536 | CTGGAGGTGCTGTCT TCTGGCTGAG CCC CTCAGCAGGA TTCTGGACGTGATTT TERM 443 1015483 - 1015494 + G 80 -2.2 -5.42198 | GCTTTTCCAAGTCAG TCCT CGCC GGGA TTTTGTTTTTTGCCG AF1140 1014975 - 1016294 + | hypothetical protein acd-8 1017454 - 1016291 - | acyl-CoA dehydrogenase (acd-8) rfbF 1018215 - 1017490 - | glucose-1-phosphate cytidylyltransferase (rfbF) pgsA-1 1018437 - 1018862 + | CDP-diacylglycerol--glycerol-3-phosphate-3-phosphatidyltransferase (pgsA-1) AF1144 1020214 - 1018859 - | multidrug resistance protein TERM 444 1019034 - 1019011 - G 70 -9.6 -3.25896 | overlap 1019009 1019012 TTACCATTGAGAAGA CGAGCATGAC GAGA GCCATGCTCA AAGTCTGCCCTACGA TERM 445 1020186 - 1020200 + g 76 -5.6 -4.75174 | overlap 1020188 GAAGCAACACCTGAT GTCAGC AGA GCTGCC TTTTTCAGTTGCATG cat2-1 1021694 - 1020246 - | 4-hydroxybutyrate CoA transferase (cat2-1) pgk 1023026 - 1021803 - | 3-phosphoglycerate kinase (pgk) TERM 446 1022348 - 1022334 - G 71 -7.2 -3.99324 | TTTCAGCATGAGAAA GTAGTT GGC AACTAC ACCCGTGAGAACGAC TERM 447 1022451 - 1022468 + g 70 -8.4 -3.72695 | GACAAATATCTTTCT CCCCTC CCCCTT GAGGGG TTTGCTGAGGGCGGT argJ 1023092 - 1024231 + | bifunctional ornithine acetyltransferase/N-acetylglutamate synthase protein AF1148 1024677 - 1024228 - | AsnC family transcriptional regulator TERM 448 1025652 - 1025668 + G 70 -10.1 -3.25986 | opp_overlap 1025651, overlap 1025665 AGAGGCTGAGGAGAG GTTCGCC AAG GGCGAGC TTGATGCTCTAATCT TERM 449 1026228 - 1026250 + G 73 -5.5 -4.62069 | CCTCGACGAGAGCTT TCTCTCCAC CTTCA GCGGGGAGA TTTTTGCGATGAAAG TERM 450 1026997 - 1026983 - g 71 -5.7 -4.37658 | AAGTTGTGGAGAAAA TCTCC AGCGG GGAGA TTGAAGTTTCTGTTT lhr-1 1024783 - 1027461 + | large helicase-related protein (lhr-1) AF1149a 1027491 - 1027718 + | hypothetical protein AF1150 1027711 - 1028061 + | erpK protein, putative AF1151 1028368 - 1028042 - | hypothetical protein TERM 451 1028265 - 1028283 + g 73 -3.1 -4.95155 | overlap 1028266 AGGTCATCTCCCACA GCTACGA CGTTC TCGTAGA TTTTTCTCATCTCAC AF1152 1028415 - 1029488 + | hypothetical protein AF1153 1030572 - 1029481 - | iron-sulfur cluster binding protein AF1154 1031156 - 1030569 - | hypothetical protein AF1155 1031231 - 1031899 + | hypothetical protein AF1156 1031961 - 1032470 + | hypothetical protein TERM 452 1032653 - 1032665 + T 80 -7.7 -4.41548 | TTTTCGTCACTCCAC TCCTG ATT CAGGA TTTTGTCACCTCTGC purD 1034484 - 1033072 - | phosphoribosylamine--glycine ligase (purD) TERM 453 1034263 - 1034280 + g 74 -6.9 -4.41348 | opp_overlap 1034264, overlap 1034264 TTCCGGTCCGATGTA AGCGAGG TCAA CCTCGCA TTTCTTTGCGAACCG TERM 454 1034264 - 1034279 + g 73 -10.4 -3.24488 | opp_overlap 1034264, overlap 1034263 TCCGGTCCGATGTAA GCGAGG TCAA CCTCGC ATTTCTTTGCGAACC TERM 455 1034279 - 1034264 - G 71 -10.4 -3.05384 | opp_overlap 1034264 1034263 TCCGGTCCGATGTAA GCGAGG TCAA CCTCGC ATTTCTTTGCGAACC AF1158 1034648 - 1034986 + | ATP synthase, subunit E, putative TERM 456 1035374 - 1035357 - g 73 -11.3 -3.00774 | overlap 1035359 CAGCTCAACCAGATA GAGCCTC TCAA GAGGCTC GGAATACCCGCAAGA TERM 457 1036963 - 1036975 + G 70 -9.1 -3.53811 | TTGAGGGTGGCGGAA GGCTC TAC GAGCC TTTCGGCAGGATAAA atpI 1034979 - 1037009 + | V-type ATP synthase subunit I atpK-1 1037037 - 1037264 + | H+-transporting ATP synthase, subunit K (atpK-1) TERM 458 1037366 - 1037395 + G 86 -8.7 -4.44797 | gap 1, overlap 1037367 GGTTGGTGTCGACCG CGAGGATGGTT-CT CGG AGTAACCATCCTCA TTTTAATATTAATAG TERM 459 1037367 - 1037394 + G 79 -12.2 -3.26155 | gap 1, overlap 1037366 GTTGGTGTCGACCGC GAGGATGGTT-CT CGG AGTAACCATCCTC ATTTTAATATTAATA AF1161 1037266 - 1037448 + | hypothetical protein atpK-2 1037457 - 1037684 + | H+-transporting ATP synthase, subunit K (atpK-2) atpE 1037695 - 1038261 + | V-type ATP synthase subunit E atpC 1038269 - 1039297 + | V-type ATP synthase subunit C atpF 1039294 - 1039599 + | V-type ATP synthase subunit F atpA 1039590 - 1041335 + | V-type ATP synthase subunit A atpB 1041335 - 1042753 + | V-type ATP synthase subunit B TERM 460 1042852 - 1042837 - g 73 -9 -3.65963 | overlap 1042835 GAAGAAGGATAAAGA TGGCCA CCCG TGGCCA TGCACTGCTTAAGAT atpD 1042779 - 1043408 + | V-type ATP synthase subunit D TERM 461 1043490 - 1043479 - gf 74 -3.6 -5.06016 | opp_overlap 1043486 ACGATATAAAGAAAA CCGC TCTG GCAG TGGTTACAGCCTTAA AF1169 1043457 - 1044077 + | hypothetical protein rbsA-2 1044052 - 1045164 + | ribose ABC transporter, ATP-binding protein (rbsA-2) TERM 462 1045334 - 1045345 + G 73 -5.8 -4.43859 | GGGGAGAAGCCTGAA GCTC CTGA GAGC TTTTCTACCATTCTA AF1171 1045161 - 1045814 + | hypothetical protein AF1172 1046476 - 1045766 - | hypothetical protein TERM 463 1046408 - 1046393 - G 70 -4.6 -4.73432 | overlap 1046394 GTAAACACAAACAAA GCTGCC CGCC GGCAGA CCCCCATCTAACCTT TERM 464 1046768 - 1046780 + G 73 -5.5 -4.62069 | opp_overlap 1046755 1046768 AAGCTTATTGAAGAA GCTGT AAA GCAGC TTTTTGAAATCAGAG AF1173 1046657 - 1047250 + | hypothetical protein AF1174 1047312 - 1047932 + | hypothetical protein TERM 465 1048904 - 1048885 - g 72 -8.6 -3.8917 | CGTGAAGCACAAGAA CGTAAAGC TGAA GCTCTACG AGATGTTCGAGAAGG acdS 1047944 - 1049257 + | acyl-CoA dehydrogenase, short chain-specific (acdS) AF1176 1049267 - 1050013 + | hypothetical protein TERM 466 1050099 - 1050087 - f 72 -10.5 -2.56747 | overlap 1050086 1050084 CATGCAGTACAACAT GGGCC TGA GGCCC GAGAAAGTTATGAGG hbd-6 1050117 - 1051055 + | 3-hydroxyacyl-CoA dehydrogenase (hbd-6) TERM 467 1051434 - 1051469 + G 71 -7.1 -4.13648 | gap 2 AGAAAGGGCGAAGTT GAGGAGG-AAATT-GCA GACG TGCTGATTTACCTCCTC TTTCTCTGTGACGTT AF1178 1051251 - 1051571 + | hypothetical protein AF1179 1051634 - 1052581 + | GTP cyclohydrolase AF1180 1052538 - 1053842 + | hypothetical protein AF1181 1053878 - 1054513 + | GTP-binding protein AF1182 1054510 - 1054866 + | hypothetical protein AF1183 1054880 - 1055203 + | hypothetical protein TERM 468 1056130 - 1056111 - g 79 -5 -4.91459 | opp_overlap 1056127 GAAGAGGCAGAAAAA CTGATTCC CCTT GCAATCAG AAGGTCTGATTACGT TERM 469 1056195 - 1056183 - g 82 -7.7 -4.61633 | opp_overlap 1056173, overlap 1056173 AGAGAGCTTGAAAAA GCTCT TGA AGAGC TCAAACCTGTCAATG AF1184 1055241 - 1056611 + | signal-transducing histidine kinase TERM 470 1056622 - 1056600 - T 82 -8.4 -4.22524 | overlap 1056603 ATACCGAAAATTAAA GAGGAAGGCT GAG AGCCCTCGTC GGGCAGACCTTCACG AF1185 1056990 - 1056595 - | iron-sulfur cluster binding protein AF1186 1058462 - 1056987 - | hypothetical protein TERM 471 1057990 - 1058001 + g 71 -5.8 -4.29326 | GTTGCGGCATTGTAG CGCT GGTA AGCG TTTCTTGGATTTACC AF1187 1059951 - 1058602 - | hypothetical protein AF1188 1060471 - 1059944 - | hypothetical protein TERM 472 1060185 - 1060171 - G 71 -7.8 -3.97959 | AAACAATAGAGTAAA TCGGGC TGG ACCCGA AGATTAAAAGCAAAA AF1189 1060659 - 1060468 - | hypothetical protein TERM 473 1060787 - 1060811 + r 77 -7.9 -4.19276 | overlap 1060789 GAGGGGTTAGCAGTC TTTCCCCAATT CCT GATTGGGGATA TTTTAAAGCTTTTAA TERM 474 1060789 - 1060809 + r 80 -10.5 -3.68674 | overlap 1060787 GGGGTTAGCAGTCTT TCCCCAATT CCT GATTGGGGA TATTTTAAAGCTTTT hbd-7 1061830 - 1060943 - | 3-hydroxyacyl-CoA dehydrogenase TERM 475 1061662 - 1061680 + g 77 -10.3 -3.50572 | opp_overlap 1061656 1061672 1061673, overlap 1061668 TCTCCACAAGCCTTC TCAGGCC AAAGG GGCCTGA TTCTATCAGCTCCAT menB 1062664 - 1061831 - | dihydroxynaphthoic acid synthase (menB) TERM 476 1062672 - 1062659 - G 76 -5.9 -4.70879 | overlap 1062660 CTGAAACTTCAAAAA GCCCA CCTC CGGGC AGGGAAAAATGTACT AF1192 1064691 - 1062697 - | hypothetical protein TERM 477 1064137 - 1064127 - G 70 -2.4 -5.03994 | TCTCATACACAAAAA CCGG ATT CAGG TCCATCTCCACTATA AF1193 1065323 - 1064742 - | hypothetical protein AF1194 1065759 - 1065325 - | hypothetical protein AF1195 1067211 - 1065772 - | replication factor C large subunit mer-2 1068285 - 1067239 - | N5,N10-methylenetetrahydromethanopterin reductase (mer-2) fadA-2 1069625 - 1068351 - | 3-ketoacyl-CoA thiolase (fadA-2) TERM 478 1069489 - 1069512 + g 76 -6 -4.62471 | gap 1, overlap 1069489 1069490 TCAATGGATTCGGGA G-TGGGCTTTG GTG CAACGCCCAGC TTTTTCAGCATTCCC TERM 479 1069789 - 1069807 + r 71 -7.4 -3.80697 | opp_overlap 1069793 ACGTTACGTCCTTCA TGAAGCGC TAA GAGCTTCA TTCTCTTCGTTTGCT gctA 1071749 - 1070406 - | glutaconate CoA-transferase, subunit A (gctA) TERM 480 1071486 - 1071462 - GR 100 -10.1 -4.72486 | opp_overlap 1071469, overlap 1071464 CAGAAACGGGAAAAA TTGAAAAGAGG TTA CCTCTTTTCGA CAAGGGCGACGAGTC TERM 481 1071484 - 1071464 - GR 83 -12.7 -2.6436 | opp_overlap 1071469, overlap 1071462 GAAACGGGAAAAATT GAAAAGAGG TTA CCTCTTTTC GACAAGGGCGACGAG TERM 482 1071469 - 1071479 + gr 71 -6.8 -4.07568 | opp_overlap 1071464 1071462 GGGAAAAATTGAAAA GAGG TTA CCTC TTTTCGACAAGGGCG AF1200 1072309 - 1071473 - | hypothetical protein AF1201 1072416 - 1073102 + | hypothetical protein AF1202 1073574 - 1073077 - | molybdopterin oxidoreductase, iron-sulfur binding subunit AF1203 1075792 - 1073567 - | molybdopterin oxidoreductase, molybdopterin binding subunit AF1204 1075930 - 1075808 - | hypothetical protein panF-2 1077361 - 1075937 - | pantothenate permease (panF-2) hbd-8 1078362 - 1077415 - | 3-hydroxyacyl-CoA dehydrogenase (hbd-8) TERM 483 1078128 - 1078138 + g 71 -6.8 -4.22346 | ATGCCCCTTTCAGTG CCTC TTC GAGG TTTTCAGTGAATTTA TERM 484 1078217 - 1078200 - G 78 -2.1 -5.32882 | gap 1 CACTACCAGAAAAAA TTTC-ACT GAG AGTTGAAA CTGTGCGAGCGATGC TERM 485 1078222 - 1078236 + g 77 -11.4 -3.3676 | opp_overlap 1078218 GAGAGTTGAAACTGT GCGAGC GAT GCTCGC TTCTGCCCTATTCAG kduD 1079198 - 1078353 - | 2-deoxy-D-gluconate 3-dehydrogenase (kduD) AF1208 1079553 - 1079209 - | hypothetical protein AF1209 1080360 - 1079719 - | hypothetical protein AF1210 1081318 - 1080377 - | hypothetical protein TERM 486 1082664 - 1082680 + G 70 -8.7 -3.61715 | opp_overlap 1082652 AAAGGATTCTGAGGA GTTCGGG CAT TCCGAAC TTCTTCGACCCCGTG AF1211 1081427 - 1083484 + | hypothetical protein AF1212 1083485 - 1084543 + | hypothetical protein AF1213 1084551 - 1085000 + | hypothetical protein pad1 1085583 - 1085035 - | phenylacrylic acid decarboxylase (pad1) AF1215 1086767 - 1085583 - | cell division protein, putative TERM 487 1088092 - 1088078 - gH 80 -6.4 -4.73682 | CCGGACAACATAAAA TTCGAG ATA CCCGAA AAGGTCACCGCGGAG lysK 1086869 - 1088350 + | lysyl-tRNA synthetase AF1217 1088317 - 1089342 + | hypothetical protein AF1218 1089351 - 1089644 + | hypothetical protein AF1219 1089641 - 1090396 + | hypothetical protein AF1220 1090396 - 1091619 + | peptide chain release factor 1 AF1221 1091627 - 1091773 + | hypothetical protein TERM 488 1092825 - 1092801 - g 70 -10 -3.23393 | opp_overlap 1092801, overlap 1092799 GCGTACCCGACAATA GCCAGCAAGG CCCTT CCCTACTGGC TTTTTGTCCTGCTTC TERM 489 1092801 - 1092825 + G 79 -5.6 -4.94902 | opp_overlap 1092801 1092799 GCGTACCCGACAATA GCCAGCAAGG CCCTT CCCTACTGGC TTTTTGTCCTGCTTC TERM 490 1093147 - 1093133 - g 76 -5.6 -4.78107 | overlap 1093135 CAGGATGACCAAAAA CGCAGC AAG GCTGAG CATGATTGCGGGGTT putP-3 1091859 - 1093298 + | proline permease (putP-3) AF1223 1094090 - 1093263 - | hypothetical protein AF1224 1094638 - 1094090 - | hypothetical protein TERM 491 1094251 - 1094273 + g 70 -8.4 -3.66556 | TAACCCCCATCGCGA GATTGTCGGC AAA GCTGACTATC TTCTCTTCAAGCGTT AF1225 1095328 - 1094690 - | hypothetical protein AF1226 1095831 - 1095325 - | hypothetical protein TERM 492 1095649 - 1095662 + g 76 -4.5 -4.9725 | overlap 1095651 TTCCGACAGGTCAGA TGGGG GTTT CTCCA TTTTTGTCTCCAACT AF1227 1096168 - 1095836 - | hypothetical protein AF1228 1096442 - 1096146 - | hypothetical protein AF1229 1098743 - 1096491 - | hypothetical protein AF1230 1099221 - 1098760 - | hypothetical protein AF1231 1100623 - 1099214 - | hypothetical protein TERM 493 1099720 - 1099749 + g 77 -12.9 -2.73364 | opp_overlap 1099717, overlap 1099730 TTGCCGGATACATGC CTGTCGGCATCCC TGCA GGGATGCTGGTAG TCATTCCCGTGGGCA TERM 494 1100123 - 1100135 + g 73 -3.3 -4.91873 | GTAATGCACTACGCC CGTGA TAC TCTCG TTTTTGATTGCTATG AF1232 1100687 - 1101382 + | hypothetical protein AF1233 1101375 - 1102010 + | hypothetical protein mutT 1102007 - 1102420 + | mutator protein MutT (mutT) AF1235 1102398 - 1102709 + | transcription-associated protein TFIIS AF1236 1102884 - 1103408 + | hypothetical protein AF1237 1104441 - 1103548 - | hypothetical protein TERM 495 1104061 - 1104072 + g 74 -3.6 -5.06103 | TACAAGGTCTTCGTA GCCT TCAG GGGC TTTTTTCAGCGTTAT TERM 496 1105164 - 1105148 - g 74 -3.5 -5.03994 | overlap 1105149 CCTCATAGAGAAAAA TCCCACC ATT GGGGGGC ACATGGCCACGCTTA AF1238 1104633 - 1106942 + | heterodisulfide reductase, subunit A/methylviologen reducing hydrogenase, subunit delta fdx-7 1107204 - 1106980 - | ferredoxin (fdx-7) trpB-1 1108577 - 1107270 - | tryptophan synthase subunit beta hemL 1108659 - 1109915 + | glutamate-1-semialdehyde aminotransferase hemC 1109912 - 1110781 + | porphobilinogen deaminase cysG-2 1110771 - 1111505 + | uroporphyrin-III C-methyltransferase (cysG-2) AF1244 1111521 - 1112006 + | hypothetical protein napA-2 1112008 - 1113024 + | Na+/H+ antiporter (napA-2) AF1246 1113328 - 1113014 - | hypothetical protein TERM 497 1113553 - 1113539 - g 73 -2.8 -4.99035 | opp_overlap 1113539, overlap 1113540 TTACCGAGAGAAAAA TCATTC GCA GAATGC TGGATTTGAAGAGGG TERM 498 1114530 - 1114515 - g 70 -4.6 -4.64598 | GAAGGAGGGCAAAAA CGGCAG AAAT CTGGCG AGGATGAATTCCTAC AF1247 1113436 - 1114653 + | hypothetical protein AF1248 1115305 - 1114619 - | hypothetical protein AF1249 1115765 - 1115343 - | hypothetical protein AF1250 1116185 - 1115796 - | hypothetical protein AF1251 1116909 - 1116190 - | hypothetical protein oadA 1118377 - 1116935 - | oxaloacetate decarboxylase TERM 499 1118400 - 1118412 + H 77 -4.9 -4.90136 | opp_overlap 1118398 1118400 GCCTGATGGGAAATA CAAAA ATT TTTTG TTTTTAATATTGCTT AF1253 1118506 - 1118700 + | hypothetical protein AF1254 1118783 - 1119322 + | hypothetical protein argF 1120323 - 1119400 - | ornithine carbamoyltransferase AF1256 1120737 - 1120351 - | response regulator TERM 500 1120458 - 1120488 + g 86 -14.1 -3.05294 | gap 1, opp_overlap 1120449 1120474, overlap 1120464 CGAGAATTTCCTGCC CTCTGTG-GGCCGC AAAG GCGGTCACACAGAG TATTACGGCCTTTGG AF1257 1121717 - 1120755 - | hypothetical protein TERM 501 1121004 - 1121016 + g 70 -4.8 -4.62069 | overlap 1121002 1121011 GCGGACAGACTCGTC CCTC AAGGG GAGG TTTTTCGCGTCACCG TERM 502 1121527 - 1121501 - G 76 -4.5 -5.03145 | gap 1, opp_overlap 1121526, overlap 1121502 GAATCTCCGAAAAAA CCTGCTCAAGCT CGCT AAC-TGAGCAGA TGTCGTATATCTTGG TERM 503 1121703 - 1121726 + g 90 -6.1 -5.24416 | ATCCGCAGAGAGGTA GAAGAGGAA CTTCAT TTCTTCTTC TTTTTCTTGTCCTTC srp19 1122028 - 1121714 - | signal recognition particle, subunit SRP19 (srp19) AF1259 1122812 - 1122033 - | inosine monophosphate dehydrogenase, putative purQ 1123664 - 1122849 - | phosphoribosylformylglycinamidine synthase subunit I alkK-4 1124573 - 1123872 - | medium-chain acyl-CoA ligase (alkK-4) noxB-2 1126605 - 1124707 - | NADH oxidase (noxB-2) TERM 504 1124872 - 1124858 - G 70 -10 -3.26722 | opp_overlap 1124856, overlap 1124856 CCGACAGCTATAACA GCAGTG TCA CACTGC AACTCTTTCCTCTCA AF1263 1127724 - 1126615 - | iron-sulfur cluster binding protein AF1264 1127799 - 1128569 + | hypothetical protein AF1265 1129275 - 1128580 - | metal-dependent hydrolase TERM 505 1128901 - 1128916 + g 70 -10.4 -2.97382 | opp_overlap 1128899, overlap 1128900 TGAGACGATAAAGCC CGCTGG AAGG CCAGCG CTTATTATGTTCCCC AF1266 1129378 - 1129887 + | hypothetical protein AF1267 1130368 - 1130490 + | hypothetical protein AF1268 1130820 - 1131389 + | hypothetical protein AF1269 1131912 - 1132019 + | hypothetical protein AF1270 1132053 - 1132331 + | ArsR family transcriptional regulator purE 1132258 - 1132800 + | phosphoribosylaminoimidazole carboxylase (purE) hemH 1132805 - 1133800 + | phosphoribosylaminoimidazole-succinocarboxamide synthase TERM 506 1134706 - 1134695 - g 70 -2.2 -4.96848 | opp_overlap 1134697, overlap 1134696 1134697 CCGTTGACACAAAAA CCCT CCCC AAGG AGTTTGAGGTCACAC carA 1133797 - 1134873 + | carbamoyl phosphate synthase small subunit carB 1134880 - 1138110 + | carbamoyl-phosphate synthase, large (or ammonia) subunit (carB) AF1275 1138097 - 1138786 + | hypothetical protein AF1276 1139035 - 1138751 - | hypothetical protein TERM 507 1138902 - 1138922 + g 74 -2.5 -5.09895 | opp_overlap 1138907, overlap 1138903 TTCACAGCTGGATTT TCAAATCCT CTC AGGATTAGC TTTTTTCCCTCGATA TERM 508 1139134 - 1139120 - g 86 -5.6 -5.24129 | TGCTGCCATAAAAAA CCATCC CGC GGAGGG TCTGGGATACCTCGA TERM 509 1139700 - 1139688 - g 76 -3.3 -5.19275 | AGGGAGAAAATAAAA GCCCA CAA CGAGC TGTGCGAAAAATTTG AF1277 1139097 - 1139738 + | hypothetical protein AF1278 1140951 - 1139728 - | hypothetical protein AF1279 1141697 - 1140948 - | hypothetical protein argB 1142587 - 1141715 - | acetylglutamate kinase (argB) pfpI 1143366 - 1142860 - | intracellular protease (pfpI) AF1282 1143365 - 1144003 + | hypothetical protein TERM 510 1144136 - 1144150 + G 72 -10 -3.45737 | overlap 1144110 AGCTTTCTCAGCTTG GCGTTG CTT CAACGC TTGTAATGCTGGTTA AF1283 1144006 - 1144308 + | hypothetical protein TERM 511 1144718 - 1144705 - g 71 -5.9 -4.42765 | opp_overlap 1144705 TTTCAAAAAAGGAAA GCCGG TGGA CCAGC TTGTGGGAGCAATGC trx-3 1144370 - 1144774 + | thioredoxin (trx-3) AF1285 1145829 - 1144771 - | cell division protein CDC48 AF1286 1146441 - 1145872 - | acetoin utilization protein, putative acs-6 1148459 - 1146699 - | acetyl-CoA synthetase (acs-6) AF1288a 1148577 - 1150256 + | methylmalonyl-CoA mutase N-terminal domain-containing protein AF1288b 1150266 - 1150682 + | methylmalonyl-CoA mutase C-terminal domain-containing protein AF1289 1150679 - 1151719 + | hypothetical protein AF1290 1151703 - 1152191 + | hypothetical protein acaB-11 1152212 - 1153390 + | 3-ketoacyl-CoA thiolase (acaB-11) AF1292 1153395 - 1153805 + | hypothetical protein TERM 512 1154489 - 1154473 - g 77 -8.7 -4.07687 | overlap 1154474 AGTTCCCGCTGAAAA CCTCCTC GGG GAGGAGA ACAGGGGATTCTACC acd-9 1153802 - 1154956 + | acyl-CoA dehydrogenase (acd-9) AF1294 1155534 - 1154998 - | hypothetical protein AF1295 1156285 - 1155872 - | hypothetical protein TERM 513 1156305 - 1156291 - R 71 -4.2 -4.84359 | opp_overlap 1156291 TCAGTTGCATAAAAA CGCTAT GCT AAAGCG GTTATAAACTCTTCT hsp20-1 1156888 - 1156364 - | small heat shock protein (hsp20-1) cdc48-1 1159105 - 1156904 - | cell division protein CDC48 TERM 514 1156964 - 1156982 + g 100 -11 -4.59853 | CTCAACGTCCTCCTT GGTTAGGC TCG GCCTGACC TTTTTCAGCGCTTCC AF1298 1159821 - 1159120 - | hypothetical protein TERM 515 1159396 - 1159384 - G 77 -9.1 -4.09685 | opp_overlap 1159384 CTGGACTCTTGAAAA CCTCC TCT GGAGG TCTTCAGCCACTTTT AF1298a 1160241 - 1160558 + | hypothetical protein tfb 1160476 - 1161456 + | transcription initiation factor IIB AF1300 1161542 - 1162453 + | ABC transporter, ATP-binding protein AF1301 1162416 - 1162610 + | hypothetical protein AF1302 1162655 - 1163221 + | hypothetical protein AF1303 1163273 - 1163422 + | hypothetical protein tpiA 1164090 - 1163419 - | triosephosphate isomerase hps-2 1165276 - 1164092 - | bifunctional formaldehyde-activating enzyme/3-hexulose-6-phosphate synthase AF1306 1166176 - 1165349 - | hypothetical protein AF1307 1166254 - 1167048 + | hypothetical protein AF1308 1167751 - 1167020 - | thymidylate kinase, putative AF1309 1168218 - 1167583 - | hypothetical protein AF1310 1168304 - 1169203 + | ISA0963-3 transposase AF1311 1169270 - 1170133 + | oxygen-independent coproporphyrinogen III oxidase, putative AF1312 1171159 - 1170143 - | hypothetical protein AF1313 1171193 - 1171963 + | hypothetical protein AF1314 1172597 - 1171950 - | hypothetical protein TERM 516 1172133 - 1172151 + g 80 -2.3 -5.50925 | GGCAAACTTAACGAG GTCGTGC ATCGG GCAGGGC TTTTTTATCTTGGTT baiF-3 1173594 - 1172599 - | bile acid-inducible operon protein F (baiF-3) TERM 517 1172859 - 1172843 - G 86 -8.1 -4.7078 | TCAACGAGGGAAAAA TTGAATC CAA GATTCAA AGCTGAGCAGAGTCG thrC-2 1173643 - 1174833 + | threonine synthase AF1317 1176355 - 1175333 - | hypothetical protein TERM 518 1176256 - 1176239 - G 76 -7.1 -4.56978 | opp_overlap 1176238 TGCGCAAAGAACAAA TCTAATC TCCT GATTAGA AATTTGTGGGTCAAA AF1318 1177626 - 1176343 - | hypothetical protein AF1319 1178538 - 1179122 + | hypothetical protein guaA-2 1179147 - 1179698 + | GMP synthase subunit A AF1321 1180562 - 1179699 - | hypothetical protein AF1322 1182064 - 1180559 - | hypothetical protein TERM 519 1183251 - 1183272 + Gr 76 -10.9 -2.71144 | opp_overlap 1183242 AAGAAACTGGGCTTT CCGAGGAGT CTGC ACTTCTCGG TAATTCCGGGCCATG AF1323 1182042 - 1183508 + | group II decarboxylase AF1324 1185011 - 1183494 - | carbohydrate kinase TERM 520 1185517 - 1185531 + G 79 -5.6 -4.91429 | CGGATTCTTTGCCGG CCCGCT TGC AGGGGG TTTTGTTTCGGATTT TERM 521 1185770 - 1185803 + G 82 -8.1 -4.46656 | opp_overlap 1185770, overlap 1185771 1185773 CCAGAGCTTAACATA TCCCAGCAGCAGGCA GGAT TGCTTGTTGCTGTGC TTTTCCTCTTCTCAG TERM 522 1185771 - 1185802 + G 76 -11.6 -3.27271 | opp_overlap 1185770, overlap 1185770 1185773 CAGAGCTTAACATAT CCCAGCAGCAGGCA GGAT TGCTTGTTGCTGTG CTTTTCCTCTTCTCA TERM 523 1185773 - 1185800 + G 81 -12.8 -3.18991 | opp_overlap 1185770, overlap 1185771 1185770 GAGCTTAACATATCC CAGCAGCAGGCA GGAT TGCTTGTTGCTG TGCTTTTCCTCTTCT AF1325 1185101 - 1186216 + | multidrug resistance protein AF1326 1186768 - 1186175 - | GTP-binding protein TERM 524 1186436 - 1186449 + g 76 -4.5 -5.02476 | overlap 1186429 CATCTCTATCTCAAC GGGGA TGTA TCCTC TTTTTTCCCACCTCT AF1327 1186975 - 1186805 - | hypothetical protein TERM 525 1188039 - 1188027 - g 70 -9.1 -3.52204 | overlap 1188035 TGACGTGGAAAGCAA GGAGG ACA CCTCC GTAAAGAAGGAGGAG glpA 1187215 - 1188576 + | glycerol-3-phosphate dehydrogenase (glpA) AF1329 1188570 - 1189271 + | hypothetical protein act-3 1190263 - 1189253 - | pyruvate formate-lyase activating enzyme (act-3) TERM 526 1189648 - 1189636 - G 74 -4.8 -4.84359 | overlap 1189639 TCAGCTCGACAAAAA CACC CTTTC GGTG AAGGTACTCGACCGT AF1331 1191252 - 1190260 - | hypothetical protein TERM 527 1191691 - 1191681 - g 76 -5.4 -4.81083 | TCGAAGGAGGAAAAA GGAA AAT TTCC GACAGAGTTCTTGTA AF1332 1191323 - 1191871 + | hypothetical protein rpl44e 1191849 - 1192130 + | 50S ribosomal protein L44e rps27e 1192144 - 1192320 + | 30S ribosomal protein S27e AF1335 1192809 - 1192339 - | hypothetical protein TERM 528 1193070 - 1193055 - gH 71 -6.8 -4.10657 | CCATATCGGTGAAAA GCATGG TGAA CCACGC CAGAGTGTGTGTAGA cobD 1192778 - 1193650 + | cobalamin biosynthesis protein TERM 529 1194936 - 1194946 + G 79 -6.8 -4.72986 | opp_overlap 1194935 1194936, overlap 1194926 TGTCCCTGCGATAAG GCAG TTT CTGC TTTTTGGTGCGGATG AF1337 1193656 - 1195734 + | hypothetical protein cbiP 1197134 - 1195740 - | cobyric acid synthase TERM 530 1196961 - 1196949 - G 73 -9.1 -3.73072 | AATGCCCGCAGCAAA GGCCT GAT AGGCC TGAGCGATGGCAATC TERM 531 1197103 - 1197073 - G 86 -8.3 -4.60255 | gap 1, opp_overlap 1197073, overlap 1197062 1197074 1197088 AGAATTCTGCAAAAA GCAGCAGCGAGCAA ACTC TTGCCTGC-GCTGC TGGTGGTTCCACCTA rpl10e 1197693 - 1197169 - | 50S ribosomal protein L10e citZ 1198849 - 1197731 - | citrate synthase (citZ) deoA-1 1200365 - 1198851 - | thymidine phosphorylase deoA-2 1201879 - 1200362 - | thymidine phosphorylase AF1343 1202006 - 1202929 + | hypothetical protein AF1344 1202960 - 1203838 + | hypothetical protein AF1345 1204143 - 1203835 - | hypothetical protein AF1346m 1204163 - 1205014 + | hypothetical protein AF1347m 1204969 - 1205337 + | hypothetical protein AF1348 1205405 - 1205662 + | hypothetical protein rd-2 1205610 - 1205831 + | rubredoxin (rd-2) TERM 532 1205822 - 1205836 + T 76 -2.1 -5.4833 | CCAGTTTGAGAAAAT TGAGG ATTAA CCTTA TTTTTTATTCCCTCG AF1350 1206638 - 1205841 - | hypothetical protein AF1351 1206877 - 1207362 + | ISA1083-2 transposase AF1352 1207355 - 1207903 + | ISA1083-2 transposase AF1353 1207894 - 1208955 + | hypothetical protein AF1354 1209024 - 1209941 + | hypothetical protein AF1355 1210932 - 1209985 - | hypothetical protein TERM 533 1211480 - 1211468 - g 85 -7.7 -4.86001 | ACGACTTGAGAAAAA TCTGG GGC CCAGA TGCAACTGAGAGCAT phoX 1211029 - 1212012 + | phosphate ABC transporter, periplasmic phosphate-binding protein (phoX) pstC 1212023 - 1212916 + | phosphate ABC transporter, permease protein (pstC) pstA 1212913 - 1213764 + | phosphate ABC transporter, permease protein (pstA) pstB 1213765 - 1214520 + | phosphate ABC transporter, ATP-binding protein (pstB) phoU 1214517 - 1215107 + | phosphate ABC transporter, regulatory protein (phoU) arsC 1215104 - 1215511 + | arsenate reductase (arsC) AF1362 1215570 - 1216592 + | hypothetical protein AF1363 1216552 - 1216815 + | hypothetical protein TERM 534 1217198 - 1217182 - g 71 -6.5 -4.12532 | opp_overlap 1217181 CGTTGGAGAGAGAAA TCCCGTC GAG GACGTGA AGTTTCTCTACCGCG AF1364 1216808 - 1217974 + | translation-associated GTPase hypE 1219305 - 1218271 - | hydrogenase expression/formation protein (hypE) TERM 535 1218301 - 1218335 + g 73 -11.5 -2.87211 | gap 1, overlap 1218307 AATGGGGTCTGAGAT TGGCTG-GGGTACAAC TCTC GTTGTTCCCACAGCCG TCTCTAAAACAACCT hypF 1221529 - 1219307 - | hydrogenase expression/formation regulatory protein (hypF) TERM 536 1219519 - 1219533 + g 78 -6.4 -4.80882 | opp_overlap 1219519, overlap 1219521 GTGCAACGTAGGCAA TGGCCT CGT AGGCTA TTTTTCCTCTCCCCT TERM 537 1220736 - 1220754 + g 76 -12.4 -2.8785 | ACAATTGGCCTCGCC GGGCTGAG CAG CTCGGCCC TCTCCTCATTGCTTA hypA 1221580 - 1221912 + | hydrogenase expression/formation protein (hypA) hypB 1221915 - 1222580 + | hydrogenase expression/formation protein (hypB) hypC 1222552 - 1222785 + | hydrogenase expression/formation protein (hypC) hypD 1222712 - 1223827 + | hydrogenase expression/formation protein (hypD) vhtD-1 1224191 - 1223799 - | F420-nonreducing hydrogenase (vhtD-1) vhuA 1225539 - 1224163 - | methylviologen-reducing hydrogenase, subunit alpha (vhuA) vhuG 1226417 - 1225536 - | methylviologen-reducing hydrogenase, subunit gamma (vhuG) vhuD 1226818 - 1226414 - | methylviologen-reducing hydrogenase, subunit delta (vhuD) hdrB 1227699 - 1226815 - | heterodisulfide reductase, subunit B (hdrB) hdrC 1228183 - 1227701 - | heterodisulfide reductase, subunit C (hdrC) hdrA-2 1230159 - 1228180 - | heterodisulfide reductase, subunit A (hdrA-2) vhtD-2 1230805 - 1230299 - | F420-nonreducing hydrogenase (vhtD-2) hydC 1231454 - 1230759 - | quinone-reactive Ni/Fe-hydrogenase B-type cytochrome subunit (hydC) vhtA 1233165 - 1231456 - | F420-nonreducing hydrogenase (vhtA) TERM 538 1232797 - 1232784 - GR 83 -9.5 -3.93256 | GATACTTGCAAACAA CCCCG AGTT CGGGG CCGAGAAGAATGTAA TERM 539 1233065 - 1233077 + gr 79 -5.5 -4.89729 | opp_overlap 1233060, overlap 1233066 TTAACAACATCCCAC TCTCC CGT GGAGG TTTTTAGCTTTTCTG vhtG 1234198 - 1233137 - | F420-nonreducing hydrogenase (vhtG) TERM 540 1233471 - 1233487 + gr 77 -10.9 -2.87132 | opp_overlap 1233470 1233467 1233469 1233484 TCCTCAATGAAGACT CCTCTGT CAT ACAGAGG TCTGTAGGGGCAGAG AF1382 1234600 - 1234313 - | hypothetical protein AF1383 1235635 - 1234736 - | ISA0963-4 transposase AF1384 1235825 - 1236193 + | response regulator AF1385 1236709 - 1236260 - | hypothetical protein TERM 541 1236352 - 1236362 + gF 81 -6.8 -4.66833 | opp_overlap 1236352 CTCTCTTTCTGAAAA CTGC TTT GCAG TTTTTCAGCTTGGAC TERM 542 1236362 - 1236352 - Gf 71 -6.8 -4.07568 | opp_overlap 1236352 CTCTCTTTCTGAAAA CTGC TTT GCAG TTTTTCAGCTTGGAC AF1386 1236687 - 1236956 + | hypothetical protein AF1387 1237203 - 1237063 - | hypothetical protein AF1388 1237252 - 1239198 + | DNA helicase, putative braG-4 1240040 - 1239330 - | branched-chain amino acid ABC transporter, ATP-binding protein (braG-4) braF-4 1240830 - 1240006 - | branched-chain amino acid ABC transporter, ATP-binding protein (braF-4) braC-4 1242053 - 1240776 - | branched-chain amino acid ABC transporter, periplasmic binding protein (braC-4) braD-4 1242104 - 1243042 + | branched-chain amino acid ABC transporter, permease protein (braD-4) TERM 543 1243714 - 1243685 - gf 77 -6.4 -4.48987 | opp_overlap 1243686, overlap 1243686 1243687 CTCTGAGAATCAAAA CCGCTGCAATCG GCTCAT CGATTGCGGCAA TTGCAGGCGCTCTTT braE-4 1242712 - 1244061 + | branched-chain amino acid ABC transporter, permease protein (braE-4) AF1394 1244058 - 1244453 + | hypothetical protein AF1395 1244413 - 1245372 + | hypothetical protein AF1396 1245369 - 1245857 + | hypothetical protein potD 1246809 - 1245875 - | spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein (potD) AF1398 1249226 - 1246806 - | hypothetical protein TERM 544 1248120 - 1248101 - G 74 -10 -3.55203 | AAAACGTTCCGTAAA CCACACCC GGAG GGATGTGG GACTCTGCAATAACC TERM 545 1248946 - 1248970 + g 79 -9.4 -4.2717 | gap 1, overlap 1248937 1248936 CCACCACTGCTGCCA CTGCTGCAGGT TGTA ACCTGCAG-AG TTTTGGTGACCTGCT TERM 546 1249224 - 1249210 - G 72 -3.5 -4.79953 | gap 1, overlap 1249211 1249212 AGAAGAATAAATAAA GCCGCC AGCA GGCG-C ATCAGCTCACCTCAC AF1399 1251067 - 1249226 - | hypothetical protein TERM 547 1250154 - 1250131 - G 84 -10.2 -4.0825 | overlap 1250134 TGGCGAAGTAAACAA CACCGCCCGC GACA GCAGGCGACG AGTCAATCTTTCCGT AF1400 1251719 - 1251153 - | hypothetical protein hemV-3 1252911 - 1251694 - | iron (III) ABC transporter, ATP-binding protein (hemV-3) hemU-2 1253894 - 1252908 - | iron (III) ABC transporter, permease protein (hemU-2) TERM 548 1252963 - 1252944 - G 74 -4.9 -4.81551 | opp_overlap 1252944 CAGGTAGAGGAAAAA CGGCCCT CCGAGC ATGGCCG TTATCGCCCCCACAG AF1403 1254573 - 1253914 - | hypothetical protein TERM 549 1254585 - 1254595 + r 79 -6.8 -4.56914 | opp_overlap 1254579, overlap 1254579 GCATCAGAACCTCGC CCCT GTG AGGG TTTTCGTTTCAATCA AF1404 1254806 - 1254573 - | AsnC family transcriptional regulator AF1405 1255300 - 1254836 - | hypothetical protein AF1406 1257660 - 1255333 - | hypothetical protein TERM 550 1257268 - 1257283 + g 80 -3.3 -5.31158 | overlap 1257256 GAGGTCCTCTTCTGT GAAAG GGGCTA CTTTC TTTTTGCTTTTTTTG AF1407 1258217 - 1257753 - | hypothetical protein AF1408 1258630 - 1258196 - | hypothetical protein TERM 551 1258459 - 1258472 + g 95 -2.4 -5.88565 | GTGGAAGGCGAAGTT TAGC ATTCAG GCTA TTTTTTTCTTCTACG AF1409 1261556 - 1258647 - | modification methylase, type III R/M system TERM 552 1260250 - 1260265 + g 74 -4.6 -4.82901 | AGCAGCAGATTTAAG GCGTGA AAGT TCTCGC TTTTTATCAAAACAC TERM 553 1261174 - 1261192 + g 73 -5.2 -4.70266 | overlap 1261177 ACCCTAAACGTGTAC CTCCCGAA GCA TTCGGTGG TTTTTACGTAATATT AF1410 1262718 - 1261645 - | ISA0963-5 transposase TERM 554 1262685 - 1262665 - G 78 -12.6 -3.02511 | overlap 1262667 TGTAGCCTGGTAACA CAGGGGCT TGCCG AGCCCCTG CCCCGGGTTCAAATC TERM 555 1262708 - 1262718 + g 70 -2.4 -5.02074 | overlap 1262715 TTCAAATCCCGGTCG GCGC ATA GCAC TTTTTTAAAAGATGC AF1411 1264061 - 1263003 - | hypothetical protein AF1412 1265347 - 1264202 - | hypothetical protein slgB-2 1272621 - 1265344 - | surface layer protein B (slgB-2) TERM 556 1265543 - 1265554 + g 91 -7.2 -5.10064 | TCAAGGATTATGCAT CCCC AGAA GGGG TTTTTATCTGTTACA TERM 557 1266572 - 1266585 + g 74 -2.3 -5.14965 | overlap 1266568 TTTATTTTGATTACC GCGAC AGCA GTAGC TTTTTTCATCCCCCT TERM 558 1270866 - 1270886 + g 74 -9.7 -3.57615 | CGTTGTAACTGGACT GCTCAATGG TTA CCATAGAGC TTTCGAAGATATTAC AF1414 1274156 - 1272726 - | dihydropteroate synthase TERM 559 1272840 - 1272852 + g 70 -3.4 -4.81306 | GGCTGCGTGGTCAAG CCTT GAGAG AAGG TTGTTTTTTATTGCG AF1415 1275922 - 1274153 - | chloride channel, putative ribC 1276587 - 1276126 - | riboflavin synthase aspC 1277702 - 1276584 - | aspartate aminotransferase (aspC) TERM 560 1276841 - 1276859 + g 76 -8.2 -4.20918 | overlap 1276843 TTATTGCAGTTACCG TGTTCGAG TAG CTCGAATA TTTGTTCAGGTTGGG TERM 561 1276843 - 1276857 + g 70 -8.6 -3.70139 | overlap 1276841 ATTGCAGTTACCGTG TTCGAG TAG CTCGAA TATTTGTTCAGGTTG taqD 1278115 - 1277702 - | glycerol-3-phosphate cytidyltransferase (taqD) prsA-2 1278980 - 1278165 - | ribose-phosphate pyrophosphokinase (prsA-2) AF1420 1279754 - 1279005 - | membrane protein AF1421 1282613 - 1279971 - | hypothetical protein TERM 562 1280129 - 1280144 + g 73 -3.2 -4.91712 | overlap 1280128 GTTTTTCAGGTGTTG CTGGCT TTTC AGCTGG TTTTTCTCCCTTAAA TERM 563 1282668 - 1282704 + r 81 -7.2 -4.56629 | opp_overlap 1282661 1282680 TACCAATACTCTACC CTTCGAGCAGAAGCTG AACCG CAGCTTCGGCGTGCAG TTTTGTGGTGTTGTA AF1422 1283340 - 1282663 - | aspartate racemase AF1423 1284539 - 1283376 - | hypothetical protein pheT 1284652 - 1286295 + | phenylalanyl-tRNA synthetase subunit beta TERM 564 1286443 - 1286431 - g 91 -9.1 -4.8048 | opp_overlap 1286431 1286430 GCGGGATAGCAAAAA CCGTC CCG GACGG CTTTGAGCCGGGAAG bcpC-1 1286292 - 1287434 + | cofactor-independent phosphoglycerate mutase glpF 1288176 - 1287436 - | glycerol uptake facilitator, MIP channel (glpF) AF1427 1288388 - 1288173 - | hypothetical protein AF1428 1289914 - 1288412 - | hypothetical protein AF1429 1290711 - 1290058 - | hypothetical protein rpl40e 1290785 - 1290934 + | 50S ribosomal protein L40e AF1431 1291414 - 1290935 - | hypothetical protein AF1432 1291923 - 1291402 - | hypothetical protein AF1433 1291938 - 1292483 + | hypothetical protein AF1434 1292528 - 1293127 + | hypothetical protein TERM 565 1293510 - 1293542 + G 84 -13.3 -3.45366 | GCACTCTCACCGTCA CAGGCGGGACGGACG TTG CGTGGGCCCCGCCTG TTGATTACTTCAAAA AF1435 1293158 - 1294144 + | RNA 3'-terminal-phosphate cyclase isf-1 1294799 - 1294137 - | iron-sulfur flavoprotein (isf-1) AF1437 1295734 - 1294808 - | hypothetical protein AF1438 1296139 - 1295756 - | hypothetical protein asnB 1297245 - 1296130 - | asparagine synthetase (asnB) gatB-1 1299118 - 1297277 - | glutamyl-tRNA(Gln) amidotransferase subunit E TERM 566 1298656 - 1298673 + g 76 -8.4 -4.13945 | opp_overlap 1298654 CCTCTTCAAGGCAGA GGGTGG CAACAC CCACCC TTTTCCCGTCAACCT AF1441 1299714 - 1299115 - | hypothetical protein AF1442 1300826 - 1299714 - | hypothetical protein AF1443 1300881 - 1301627 + | hypothetical protein AF1444 1302856 - 1301624 - | hypothetical protein TERM 567 1302817 - 1302830 + gT 79 -9.5 -3.61902 | CGCTCCTCTGGCACA GCCCG CATT CGGGC TTATCTGTCGTAGGC AF1445 1304318 - 1302831 - | hypothetical protein TERM 568 1304997 - 1304977 - g 76 -6.1 -4.63218 | overlap 1304978 TGGTTCGGAAGAAAA TCCCCAACA CCA TATTGGGGG AAATTTTGGAGCGCT TERM 569 1304996 - 1304978 - g 72 -9.6 -3.3761 | overlap 1304977 GGTTCGGAAGAAAAT CCCCAACA CCA TATTGGGG GAAATTTTGGAGCGC AF1446 1304382 - 1305365 + | hypothetical protein AF1447 1305362 - 1305607 + | hypothetical protein TERM 570 1305980 - 1305962 - g 82 -7.4 -4.70266 | AAGATTATCGAAAAA TTCAGGGA TTG TCCCAGAA TAATCAAGTTTTTCG AF1448 1305722 - 1306285 + | AsnC family transcriptional regulator TERM 571 1307071 - 1307057 - g 74 -4.2 -4.82901 | GTGCCCGCAGAAAAA CCTGAA ACC TTCTGG GAGGCCGTTCAGTTT TERM 572 1307747 - 1307735 - g 72 -4.1 -4.87318 | GCCAAAACCGAAAAA CCAAA ATT CTTGG AAGACTTGCTGGAAA TERM 573 1308281 - 1308270 - g 91 -7.2 -5.07486 | CATCGGGAAGAAAAA GCGG AGAG CCGC TGAATCCGGGAGTAA pflD 1306319 - 1308649 + | pyruvate formate-lyase 2 (pflD) pflC 1308637 - 1309545 + | pyruvate formate-lyase 2 activating enzyme (pflC) thsB 1309634 - 1311271 + | thermosome, subunit beta (thsB) AF1452 1311389 - 1312705 + | signal-transducing histidine kinase TERM 574 1314485 - 1314473 - g 70 -4.8 -4.6902 | overlap 1314482 CGAGAAGGTGAAAAA GAGC AAGAA GCTC ATCAAGCTCATTATT metG 1312743 - 1314719 + | methionyl-tRNA synthetase AF1454 1315840 - 1314980 - | hypothetical protein AF1455 1316150 - 1315878 - | hypothetical protein AF1456 1317138 - 1316965 - | hypothetical protein AF1457 1317949 - 1317632 - | hypothetical protein AF1458 1318040 - 1320265 + | Hef nuclease TERM 575 1320339 - 1320313 - T 73 -9.4 -3.21747 | overlap 1320316 GTAGCTCAGCAGGAA GAGCGCGTGCTT GGT AAGCACGAGGTC CCGGGTTCAAATCCC TERM 576 1320336 - 1320316 - T 70 -9.7 -2.50016 | overlap 1320313 GCTCAGCAGGAAGAG CGCGTGCTT GGT AAGCACGAG GTCCCGGGTTCAAAT AF1459 1320698 - 1320426 - | hypothetical protein AF1460 1321391 - 1320708 - | hypothetical protein AF1461 1321479 - 1321712 + | iron-sulfur cluster binding protein, putative AF1462 1321849 - 1322400 + | hypothetical protein TERM 577 1323156 - 1323125 - gf 70 -9.4 -2.63913 | gap 1, opp_overlap 1323125 CACGAGTTCACAGTA TCCCGCAGCCTGCTA CGA CAGCTGGC-ACGGGA TATTCGAGAACAAGC fdrA 1322352 - 1324079 + | fumarate reductase, flavoprotein subunit (fdrA) TERM 578 1324426 - 1324409 - g 72 -8.5 -3.92659 | CGTTGAAAATGCAAA TTCAGCT GATG AGCTGAA GAGCGTTATGGAGGA AF1464 1324209 - 1324727 + | hypothetical protein AF1465 1324761 - 1325210 + | hypothetical protein TERM 579 1325190 - 1325206 + F 73 -7.9 -3.81256 | opp_overlap 1325191, overlap 1325185 1325191 CCTGAGATGCCCAAG AGCGCTC CCA GAGCGCC TTAATTTTTCCGAAT TERM 580 1325191 - 1325205 + F 80 -11.4 -2.88031 | opp_overlap 1325191, overlap 1325190 1325185 CTGAGATGCCCAAGA GCGCTC CCA GAGCGC CTTAATTTTTCCGAA TERM 581 1325205 - 1325191 - f 81 -11.4 -3.05343 | opp_overlap 1325190 1325185 1325191 CTGAGATGCCCAAGA GCGCTC CCA GAGCGC CTTAATTTTTCCGAA AF1466 1325937 - 1326704 + | hypothetical protein AF1467 1326775 - 1327443 + | signal-transducing histidine kinase TERM 582 1328008 - 1328029 + G 76 -3 -5.06414 | gap 1, overlap 1328011 1328018 TACACGGAAAGCGGT GCGGTGAGG AGCTA CTTCAC-GC TTTTTGTTGAAAACA AF1468 1327675 - 1329144 + | hypothetical protein AF1469 1329122 - 1329802 + | ABC transporter, ATP-binding protein AF1470 1329690 - 1330919 + | hypothetical protein AF1471 1330989 - 1332332 + | hypothetical protein AF1472 1333906 - 1332422 - | signal-transducing histidine kinase AF1473 1334288 - 1333887 - | response regulator AF1474 1335733 - 1334387 - | hypothetical protein AF1475 1336191 - 1335730 - | mitochondrial benzodiazepine receptor/sensory transduction protein AF1476 1336301 - 1336834 + | hypothetical protein AF1477 1336867 - 1337253 + | hypothetical protein AF1478 1337305 - 1337520 + | hypothetical protein AF1479 1337507 - 1337899 + | hypothetical protein AF1480 1338014 - 1337853 - | hypothetical protein AF1481 1338220 - 1338011 - | hypothetical protein AF1482 1338481 - 1338224 - | hypothetical protein AF1483 1341402 - 1338676 - | signal-transducing histidine kinase AF1484 1341532 - 1341371 - | hypothetical protein tgtB 1341620 - 1342831 + | queuine tRNA-ribosyltransferase (tgtB) AF1486 1344248 - 1342833 - | phosphoenolpyruvate carboxylase TERM 583 1343501 - 1343487 - G 76 -7.8 -4.36914 | GTTCTTCGGAGAAAA CCCTCC CCT GAAGGG ACACGAGCCAACACC TERM 584 1343655 - 1343633 - G 74 -2.6 -5.06816 | overlap 1343634 1343635 ACCTCGCAAGAAAAA CTCTGAGCTC GTC AAGCTCAGCC CACTCTGCATACCTC TERM 585 1344601 - 1344591 - R 78 -4 -5.27476 | GCCAATAAAATAAAA TAAG GAG CTTA ATCACCCCTTAACTC AF1487 1345262 - 1344603 - | hypothetical protein TERM 586 1344687 - 1344672 - G 77 -10.4 -3.53761 | opp_overlap 1344670 1344675 TAAGGCGGCTTCAAA TCCCGG AATT CCGGGA ACTTCGCTCTTTGCA AF1488 1345942 - 1345418 - | nicotinamide-nucleotide adenylyltransferase TERM 587 1345695 - 1345677 - G 70 -4.4 -4.68593 | TTTATTATGTAAAAA GCGTGGCC AAC GTACACGC TCATCGTTGGAACAG iorA 1347834 - 1345963 - | indolepyruvate ferredoxin oxidoreductase, subunit alpha (iorA) TERM 588 1348387 - 1348363 - g 72 -8.5 -3.91072 | overlap 1348364 CGAAATCGGTAGAAA GCTCGGCCC TGTTTTG GGGCCGAGG GGCAAGATTCCGCAG TERM 589 1348386 - 1348364 - g 76 -12 -2.94161 | overlap 1348363 GAAATCGGTAGAAAG CTCGGCCC TGTTTTG GGGCCGAG GGGCAAGATTCCGCA rpl1P 1348001 - 1348648 + | 50S ribosomal protein L1P rplP0 1348649 - 1349668 + | acidic ribosomal protein P0 TERM 590 1349969 - 1349995 + G 74 -8.6 -4.1144 | opp_overlap 1349969, overlap 1349973 1349981 GAAGTCAAGGAAGAA GAGGCCATCGAG GGG CTCGGAGCCCTC TTTGGTTAATTTTTT rpl12p 1349684 - 1350004 + | 50S ribosomal protein L12P TERM 591 1349981 - 1349993 + F 74 -9.1 -3.61541 | opp_overlap 1349969, overlap 1349969 1349973 GAAGAGGCCATCGAG GGGCT CGG AGCCC TCTTTGGTTAATTTT hpyA1-2 1350224 - 1350427 + | histone A1 (hpyA1-2) TERM 592 1350438 - 1350448 + T 70 -2.6 -5.01732 | opp_overlap 1350438 TGTAAAAATTTTAAA TTTA CCT TAAA TTTTTTAGACGACTT AF1494 1351160 - 1350453 - | hypothetical protein TERM 593 1351144 - 1351087 - G 74 -8 -4.07687 | gap 1, opp_overlap 1351095, overlap 1351095 1351105 AGTGCTTCGGGAAAA GCAAGAACGGGTTTTAAATCAGAGGCT TTTCT AACCTCTGACTGAAAAACC-TTCTTTC CGAAAACAAACTCCA AF1495 1351234 - 1351647 + | hypothetical protein AF1496 1351644 - 1352705 + | hypothetical protein aroA 1352674 - 1353924 + | 3-phosphoshikimate 1-carboxyvinyltransferase AF1498 1354744 - 1353914 - | dehydrase, putative TERM 594 1354352 - 1354339 - G 70 -2.3 -4.91109 | opp_overlap 1354345 GCTCGATCAGAAAAA CGTGG TGGT CCATG GTGTGACCTTTAACG AF1499 1354833 - 1355537 + | hypothetical protein AF1500 1355583 - 1355927 + | hypothetical protein AF1501 1355932 - 1356675 + | hypothetical protein AF1502 1356878 - 1356672 - | hypothetical protein TERM 595 1356840 - 1356860 + g 78 -2.6 -5.3236 | GATCGGCCCGATTTC CTTTTTGA GCTCA TCTAAAAG TTTTTTGTAGGTTAT AF1503 1357891 - 1356875 - | hypothetical protein AF1504 1358493 - 1357888 - | hypothetical protein TERM 596 1358404 - 1358418 + g 76 -2.8 -5.10208 | overlap 1358405 GGATTTTAACTTTGC TTCAAG CTC CTTGAC TTTTTCTTGAAGTTC AF1505 1359548 - 1358538 - | hypothetical protein asd 1360777 - 1359746 - | aspartate-semialdehyde dehydrogenase AF1507 1361146 - 1360808 - | hypothetical protein AF1508 1362651 - 1361209 - | hypothetical protein AF1509 1363501 - 1362713 - | hypothetical protein fadD-6 1365160 - 1363502 - | acyl-CoA synthetase TERM 597 1364448 - 1364435 - G 70 -4.5 -4.70659 | opp_overlap 1364435, overlap 1364436 TGTGACATGGAAAAA CGGCA GGGT TGCCA GTGATATGGCTGAGG AF1511 1367830 - 1365185 - | hypothetical protein TERM 598 1366550 - 1366562 + g 76 -3.3 -5.08088 | overlap 1366546 TACTCCTGAAGCGAT GGCGA GTA TCGGC TTTTTCTTCGAAATT TERM 599 1367536 - 1367556 + g 87 -7.5 -4.9792 | opp_overlap 1367532 TGACCACAAACCCCA CTTCCGCGG AAT CTCCGGAAG TTTTTCTGTAAACTG AF1512 1368579 - 1367827 - | hypothetical protein AF1513 1369235 - 1368651 - | hypothetical protein TERM 600 1368795 - 1368808 + g 70 -4.5 -4.66163 | AGCCCAGATCAGCTC GCTGC AATA GTAGC TTTTTCCGTAAACCT TERM 601 1369321 - 1369349 + r 71 -6.1 -4.14511 | CATGAGTTTTTATGC TTGCTTTTTTGGA AAT TCCACAGAAGTAA TTTTCCGGTAAGATT AF1514 1369768 - 1369493 - | hypothetical protein TERM 602 1369946 - 1369934 - H 75 -2.7 -5.29846 | AATCCCAAATAAAAA GCTTT ATA AAAAC AAACAGTCGAACATA TERM 603 1369970 - 1369950 - H 77 -4.8 -4.96501 | gap 1, overlap 1369953 CTTTATAAAAACAAA CAGTCGAAC ATAT GTTCGA-TG GAACTCTCAATGGAC AF1515 1369968 - 1370984 + | signal-transducing histidine kinase sfsA 1371594 - 1370935 - | sugar fermentation stimulation protein A AF1517 1372079 - 1371591 - | hypothetical protein AF1518 1372682 - 1372104 - | DNA/pantothenate metabolism flavoprotein, putative isf-2 1373262 - 1372675 - | iron-sulfur flavoprotein (isf-2) fprA-2 1374725 - 1373259 - | flavoprotein (fprA-2) AF1521 1374753 - 1375352 + | hypothetical protein TERM 604 1376984 - 1376974 - g 79 -6.8 -4.66746 | GAGAAAATAAAAGAA GGCT ACA AGCC GAAAGGACAGATAAT AF1522 1375423 - 1377720 + | hypothetical protein AF1523 1377707 - 1378018 + | hypothetical protein AF1524 1378274 - 1378023 - | hypothetical protein AF1525 1379128 - 1378271 - | hypothetical protein AF1526 1379567 - 1379130 - | hypothetical protein AF1527 1380892 - 1379576 - | hypothetical protein AF1528 1381435 - 1381025 - | hypothetical protein TERM 605 1381439 - 1381455 + H 77 -8 -4.23104 | GTTCACGTCCACCCT CCCCAA TCGCC TTGGGG TTTATTAAGCTTTGA rpl21E 1381633 - 1381926 + | 50S ribosomal protein L21e TERM 606 1382099 - 1382053 - g 70 -8.7 -3.54741 | gap 1, opp_overlap 1382053, overlap 1382040 CAGGAGGGCTTTAAA GCACCTCCGCCTTTTC-GCCAA ACTT CCGGCAGATAAGGCAAAGGAGC TTGTTGATGAGCTTG TERM 607 1382136 - 1382120 - g 70 -9.4 -3.54741 | GATGAGCTTGTCAAA CTGCCC CAGGT GGGCAG CAAGGAGATAGCCGT AF1530 1381919 - 1382278 + | hypothetical protein AF1531 1382327 - 1382914 + | hypothetical protein AF1532 1382949 - 1383266 + | hypothetical protein AF1533 1384059 - 1383223 - | hypothetical protein AF1534 1384285 - 1384635 + | hypothetical protein ftrB 1384936 - 1384652 - | ferredoxin-thioredoxin reductase, catalytic subunit (ftrB) grx-1 1385230 - 1384982 - | glutaredoxin (grx-1) est-2 1386106 - 1385351 - | carboxylesterase (est-2) AF1538 1387600 - 1386140 - | hypothetical protein TERM 608 1387132 - 1387113 - G 77 -11.4 -3.3506 | overlap 1387104 CCTAAACCGGCATAA CCGGCTGC TACT ACAGCCGG ATAGTGCAATGGCTT sucD-1 1388632 - 1387757 - | succinyl-CoA synthetase, alpha subunit (sucD-1) sucC-1 1389780 - 1388629 - | succinyl-CoA synthetase, beta subunit (sucC-1) TERM 609 1389909 - 1389886 - R 86 -4.7 -5.47159 | opp_overlap 1389899 TTTCAATATAAAAAA TTTTCGGAA TTTCTT TTCCAAAAA ATTTAAATAGTAACT AF1541 1391042 - 1389924 - | hypothetical protein AF1542 1391348 - 1391043 - | hypothetical protein AF1543 1391484 - 1392299 + | hypothetical protein AF1544 1392296 - 1392691 + | ArsR family transcriptional regulator AF1545 1392785 - 1393492 + | hypothetical protein TERM 610 1393642 - 1393659 + GF 71 -9.9 -2.75647 | opp_overlap 1393635, overlap 1393641 ATGAAGAGGGACCAG CTTGAGC TGAT GCTCAAG GTTATCTACTTCGGA AF1546 1393480 - 1394331 + | hypothetical protein AF1547 1394297 - 1394440 + | hypothetical protein TERM 611 1394460 - 1394473 + F 77 -8.1 -4.17048 | TGACGAAGTTCTTGA GCTCG TCAT CGAGC TTCTTTTCAAGCACA AF1548 1394569 - 1395093 + | hypothetical protein AF1549 1395377 - 1395090 - | hypothetical protein AF1550 1395415 - 1396056 + | hypothetical protein ispB 1396924 - 1396046 - | octaprenyl-diphosphate synthase (ispB) AF1552 1397802 - 1396990 - | hypothetical protein AF1553 1397831 - 1398481 + | hypothetical protein trxB 1398503 - 1399405 + | thioredoxin reductase (trxB) AF1555 1399503 - 1399790 + | hypothetical protein TERM 612 1399795 - 1399777 - f 84 -2.4 -5.77853 | overlap 1399788 AATCCTCAAAAAAAA CTAATCTA AAA TAGCCTAG CCATTTACCCGAATT AF1556 1399935 - 1400759 + | hypothetical protein AF1557 1401092 - 1401595 + | hypothetical protein TERM 613 1403424 - 1403435 + G 76 -5.8 -4.64861 | GATAAGAAGTTCCAG CCTG TCTT CAGG TTTATTTTGAGGGAC smc1 1401597 - 1405067 + | chromosome segregation protein (smc1) AF1559 1405100 - 1405774 + | hypothetical protein AF1560 1405997 - 1406401 + | hypothetical protein AF1561 1406540 - 1407397 + | hypothetical protein AF1562 1407399 - 1407821 + | hypothetical protein AF1563 1408737 - 1407853 - | hypothetical protein TERM 614 1407944 - 1407958 + gT 78 -5.7 -4.79223 | opp_overlap 1407910 1407909 1407901 TGGTCGCCATTAACC CTCAG CACTT CTGAG TTTTTGGTCATCTCC AF1564 1409356 - 1408709 - | hypothetical protein AF1565 1409595 - 1409386 - | hypothetical protein AF1566 1409715 - 1410506 + | hypothetical protein AF1567 1410511 - 1411398 + | hypothetical protein TERM 615 1412394 - 1412424 + G 75 -9.1 -3.92522 | gap 1, overlap 1412397 GGCGGATTTTGCTCT GGAGTGTGCT-CAG GTGC CTGTAGCGCACTTC TTTCTAGACTTGGAC TERM 616 1412397 - 1412421 + G 71 -7.2 -4.08948 | gap 1, overlap 1412394 GGATTTTGCTCTGGA GTGTGCT-CAG GTGC CTGTAGCGCAC TTCTTTCTAGACTTG AF1568 1411464 - 1412516 + | hypothetical protein TERM 617 1412539 - 1412554 + G 76 -3.2 -5.20328 | ACTGCTGAAAATTCT GAGTGT GTTA ACTCTC TTTATTTTTTTCCAG AF1569 1412510 - 1413289 + | hypothetical protein AF1570 1413286 - 1413909 + | hypothetical protein AF1571 1414105 - 1415127 + | hypothetical protein AF1572 1415348 - 1415755 + | hypothetical protein AF1573 1415956 - 1416351 + | hypothetical protein AF1574 1416429 - 1417631 + | hypothetical protein AF1575 1417671 - 1418303 + | hypothetical protein AF1576 1418387 - 1418635 + | hypothetical protein AF1577 1418723 - 1419163 + | hypothetical protein AF1578 1419168 - 1419401 + | hypothetical protein TERM 618 1420091 - 1420103 + G 72 -4.1 -4.8543 | GGTTTTCCAGCGTGT CAGGA CTT TCTTG TTTTTCTCCCCCTTC AF1579 1419561 - 1420154 + | hypothetical protein AF1580 1420945 - 1420445 - | hypothetical protein AF1581 1421046 - 1421366 + | hypothetical protein TERM 619 1421467 - 1421488 + T 76 -10.9 -2.55545 | gap 1, opp_overlap 1421467, overlap 1421466 1421464 1421462 AAGAGGAGTTTAAAA CGCACGTCAC TTC GTGACG-GCG CTCTGTTCTTCGCAG TERM 620 1421488 - 1421467 - T 90 -10.9 -4.16681 | gap 1, opp_overlap 1421467 1421466 1421464 1421462 AAGAGGAGTTTAAAA CGCACGTCAC TTC GTGACG-GCG CTCTGTTCTTCGCAG AF1582 1422009 - 1421806 - | hypothetical protein AF1583 1423396 - 1422224 - | hypothetical protein AF1584 1423907 - 1423467 - | hypothetical protein TERM 621 1423785 - 1423775 - G 70 -8.2 -3.76411 | overlap 1423782 1423783 CTAAAATGATGTAAA CGCC AAA GGCG ACTATCATAATCGCT AF1585 1424184 - 1424522 + | hypothetical protein AF1586 1424519 - 1424848 + | hypothetical protein rbcL-1 1426375 - 1425062 - | ribulose bisphosphate carboxylase, large subunit (rbcL-1) TERM 622 1426017 - 1425994 - G 70 -8.2 -3.6682 | TTGGAGCCATTGAAA TGTTCCCCAC AACG GTGGAAAACA GCATTGAGAGCTTGC AF1588 1427606 - 1426380 - | hypothetical protein TERM 623 1427545 - 1427525 - G 74 -7.5 -4.19177 | AGTCTGCAAGATAAA GCTCGGAGA AAA TCCCCGACC TGCTCAATATCATCG AF1589 1428425 - 1427658 - | hypothetical protein TERM 624 1427885 - 1427899 + g 83 -5.6 -5.11063 | CGGGAATTATAGGCC CCAGGA AAA TCCAGG TTTTTATTCCCTCCT AF1590 1429585 - 1428410 - | hypothetical protein TERM 625 1431086 - 1431073 - gH 79 -5.2 -5.00616 | opp_overlap 1431083, overlap 1431074 TGCTGTTTGAAAAAA GGGG AGGCTG CCCC GCAACGGCGATTGTC AF1591 1430301 - 1431161 + | hypothetical protein AF1592 1431124 - 1431879 + | hypothetical protein nirD 1431876 - 1432076 + | heme d1 biosynthesis protein (nirD) nirH 1432054 - 1432815 + | heme biosynthesis protein (nirH) AF1595 1432812 - 1433726 + | hypothetical protein AF1596 1434064 - 1433777 - | hypothetical protein AF1597 1434438 - 1434262 - | hypothetical protein AF1598 1434830 - 1434519 - | hypothetical protein trpA 1435631 - 1434885 - | tryptophan synthase subunit alpha trpB-2 1436821 - 1435628 - | tryptophan synthase subunit beta TERM 626 1436505 - 1436526 + gr 73 -8 -3.88015 | opp_overlap 1436504 TTCTTCCCCATGAAT TTGGCCAG CAGAGC CTGGCCGA TTGTGTTGTTGATTT TERM 627 1436642 - 1436626 - GR 72 -9.4 -3.00525 | opp_overlap 1436623 TCTCTGCAAAGTAGA GGGGAG TTGGC CTCCCC GCGTAGCTTTTGAGG trpF 1437368 - 1436769 - | N-(5'-phosphoribosyl)anthranilate isomerase trpG 1437894 - 1437358 - | anthranilate synthase component II (trpG) TERM 628 1437682 - 1437657 - G 79 -7.5 -4.56597 | CTTTCCCTCCAAAAA CCTCCGCAATC ATCT GATGGCCGAGG CAGACGCCGAGCACA trpE 1439126 - 1437891 - | anthranilate synthase component I trpD 1440745 - 1439105 - | anthranilate synthase component II (trpD) TERM 629 1440585 - 1440595 + g 79 -6.8 -4.7254 | ATGTACGAAATCGCC GCTG CAC CAGC TTTTTCGTAGGCCCT TERM 630 1440750 - 1440764 + r 75 -10 -3.14211 | overlap 1440753 AAGTCCATCACCTGC TCCCAC CAT GTGGGA TTAATCCCGCGAAGT potD 1442012 - 1440824 - | spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein (potD) potC 1442772 - 1442044 - | spermidine/putrescine ABC transporter, permease protein (potC) potB 1443515 - 1442769 - | spermidine/putrescine ABC transporter, permease protein (potB) TERM 631 1443020 - 1443031 + g 74 -4.4 -4.8667 | AGAGAGGCATTACCA CCTT TAAA AAGG TTTTTATCGGGTCTG potA 1444549 - 1443512 - | spermidine/putrescine ABC transporter, ATP-binding protein (potA) proS 1444609 - 1446336 + | prolyl-tRNA synthetase TERM 632 1446806 - 1446831 + GF 74 -6.2 -4.45544 | CGTTTACAAACAGTT CAATCCCC ACGGCGTTAC GGGGATTG TTTTGATTGCTGAAA AF1610 1446663 - 1447001 + | S-adenosylmethionine decarboxylase proenzyme TERM 633 1447543 - 1447560 + GF 73 -5.5 -4.56367 | opp_overlap 1447544, overlap 1447544 GTGGCTGAGGAGTAT AGCCTCA ACGT TGAGGCC TTTGTTTATGACGTC TERM 634 1447544 - 1447559 + GF 72 -9 -3.33097 | opp_overlap 1447544, overlap 1447543 TGGCTGAGGAGTATA GCCTCA ACGT TGAGGC CTTTGTTTATGACGT AF1611 1446910 - 1448025 + | hypothetical protein TERM 635 1448151 - 1448173 + G 83 -9.1 -4.29325 | AACAATGATTGGAAT CGCCGGCAT GATTG GTGCTGGCG TTTTCGCTCTTACTG TERM 636 1448496 - 1448511 + G 71 -6.8 -4.24887 | CGCGAAGATTTCGTC GCTGGC GATG GTCAGC TTTCTTGCCTATGTT cat-1 1448089 - 1450299 + | cationic amino acid transporter (cat-1) AF1613 1450637 - 1450296 - | hypothetical protein AF1614 1451020 - 1450634 - | hypothetical protein TERM 637 1450741 - 1450755 + g 70 -8.6 -3.69685 | AGGTTATGTAGGCAT TCTCCA CAT TGGAGA TTCTGTCTATGTTCT cmo 1451071 - 1452036 + | cofactor modifying protein (cmo) AF1616 1452270 - 1452028 - | hypothetical protein TERM 638 1452193 - 1452207 + g 70 -11.4 -2.52018 | opp_overlap 1452193, overlap 1452192 1452191 GAGCTCATCCAGAGA GTGGCC TTT GGCCAC AATTTCTTCATTCTC TERM 639 1452207 - 1452193 - G 73 -11.4 -2.91582 | opp_overlap 1452192 1452191 1452193 GAGCTCATCCAGAGA GTGGCC TTT GGCCAC AATTTCTTCATTCTC AF1617 1452534 - 1452301 - | hypothetical protein AF1618 1453108 - 1452545 - | hypothetical protein AF1619 1454052 - 1453093 - | hypothetical protein AF1620 1456504 - 1454159 - | signal-transducing histidine kinase, putative TERM 640 1455718 - 1455735 + gr 70 -2.7 -4.77986 | CGTCCTTTTTTACGA TAACTTC AACA GGGGTTA TTTTTCCGTCTTTAA AF1621 1457247 - 1456261 - | hypothetical protein lrp 1457326 - 1457817 + | leucine responsive regulatory protein (lrp) aspB-3 1457783 - 1458955 + | aspartate aminotransferase (aspB-3) moaD 1458942 - 1459202 + | molybdopterin converting factor, subunit 1 (moaD) TERM 641 1459596 - 1459609 + G 76 -8.1 -4.2528 | opp_overlap 1459595 AAGTTCAACGAAACG CTGCC TAAT GGCAG TTTATTCCGTTACAG AF1625 1459275 - 1461020 + | hypothetical protein TERM 642 1461349 - 1461329 - f 71 -9.9 -2.8304 | overlap 1461321 TAAATAAGTTAACTA TTTCTAACA AAA TGTTAGAAA AACATAACGAGGTGG AF1626 1461368 - 1461730 + | hypothetical protein AF1627 1461744 - 1461959 + | repressor protein AF1628 1462137 - 1463171 + | transposase, putative AF1629 1463218 - 1463961 + | hypothetical protein AF1630 1464169 - 1463921 - | pyruvoyl-dependent arginine decarboxylase AF1631 1464449 - 1464201 - | hypothetical protein TERM 643 1464982 - 1464970 - g 78 -4.1 -5.15634 | overlap 1464972 1464981 TACTTCACCAAAAAA GGTCT GGC AAACC TGAGGATTGTTGCCC AF1632 1464637 - 1465641 + | hypothetical protein AF1633 1465646 - 1466329 + | hypothetical protein AF1634m 1467264 - 1466343 - | Fe-S oxidoreductase TERM 644 1466543 - 1466559 + g 71 -7.9 -4.11404 | AAACGTGGTCGCTGA GGAGGAG GGT CTCCACC TTTATCTCCTCTACG TERM 645 1467029 - 1467011 - G 70 -8.9 -3.53012 | opp_overlap 1467013 CTTTTCTCTCTCAAA TAGCGGA CTATC TCCGCTA TGTCGGGATGGATGA AF1636 1467539 - 1467261 - | hypothetical protein TERM 646 1467605 - 1467625 + G 81 -12.5 -3.27704 | overlap 1467606 GATGTTGTGGTTGCT GGCGTTGGC ATC GCCGGCGCC TTCGCTTTAAGGGCT chlP-3 1467542 - 1468726 + | bacteriochlorophyll synthase, 43 kDa subunit (chlP-3) rbcL 1468758 - 1470083 + | ribulose bisophosphate carboxylase TERM 647 1470828 - 1470812 - g 86 -12.3 -3.94853 | GAACCTAATAGGAAA CTCCGTG AAG CACGGAG GGGCAGGCAGAATAG AF1639 1470114 - 1471085 + | signal-transducing histidine kinase rr3 1471135 - 1471629 + | rubrerythrin (rr3) fad-4 1472428 - 1471664 - | enoyl-CoA hydratase (fad-4) hisS 1473689 - 1472460 - | histidyl-tRNA synthetase TERM 648 1474091 - 1474072 - g 71 -10.8 -3.14211 | overlap 1474075 ATCTCTTGCGATGAA GAAGGTTG ACGT CAACCTTC AGGAGCTTCCCGTCA AF1643 1473740 - 1475020 + | hypothetical protein fwdF 1475056 - 1476372 + | tungsten formylmethanofuran dehydrogenase, subunit F (fwdF) dfp 1476320 - 1477534 + | bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase TERM 649 1477545 - 1477561 + G 74 -2.2 -5.06451 | TATGATTTTTGCACC TGCAAG CATAA CCTGCA TTTTTTCACCTCATG TERM 650 1477935 - 1477959 + G 78 -5.7 -4.85599 | opp_overlap 1477925 AAAGAGCGCAGCCTG CCCCTCAAG AGCAGAA CTTGAGAGG TTTTTCTGGAATGCC AF1646 1477531 - 1478316 + | hypothetical protein AF1647 1478313 - 1479089 + | hypothetical protein AF1648 1479106 - 1480017 + | bacteriochlorophyll synthase, 33 kDa subunit fwdG 1480067 - 1480537 + | tungsten formylmethanofuran dehydrogenase, subunit G (fwdG) fwdB-1 1480534 - 1481733 + | tungsten formylmethanofuran dehydrogenase, subunit B (fwdB-1) fwdD-1 1481730 - 1482092 + | tungsten formylmethanofuran dehydrogenase, subunit D (fwdD-1) AF1652 1484821 - 1482089 - | prepro-subtilisin sendai, putative TERM 651 1482759 - 1482779 + gT 76 -6.9 -4.47183 | overlap 1482760 CTCGGCTCAAGCAGC TCTATCTGA ATT TCAGGTAGG TTTATTTCAATGCTG aprM 1485600 - 1484788 - | alkaline serine protease (aprM) AF1654 1486741 - 1485752 - | hypothetical protein AF1655 1487623 - 1486751 - | signal sequence peptidase, putative AF1656 1488059 - 1487625 - | hypothetical protein spc21 1488511 - 1488056 - | signal sequence peptidase (spc21) AF1658 1489440 - 1488508 - | hypothetical protein AF1659 1490192 - 1489440 - | hypothetical protein AF1660 1490811 - 1490203 - | hypothetical protein AF1661 1491582 - 1490830 - | hypothetical protein AF1662 1491985 - 1491716 - | hypothetical protein TERM 652 1492069 - 1492058 - R 70 -3 -5.04987 | opp_overlap 1492050 AATATTGTCAAAAAA TTGA GTTT TCAA CGGCATTTTTCAAAG AF1663 1492340 - 1492050 - | hypothetical protein TERM 653 1492505 - 1492489 - R 79 -10.1 -3.55563 | ACCGCACCTCGTAAA CCCGCAG AAC CTGCAGG TTGCGCAACCCTCCC nrd 1494729 - 1492471 - | ribonucleotide-diphosphate reductase subunit alpha arcB 1494877 - 1495845 + | alanine dehydrogenase AF1666 1495842 - 1496510 + | hypothetical protein sat 1496669 - 1498048 + | sulfate adenylyltransferase AF1668 1498050 - 1498406 + | hypothetical protein aprB 1498455 - 1498907 + | adenylylsulfate reductase, subunit B (aprB) TERM 654 1499414 - 1499385 - g 77 -11.5 -3.39327 | gap 1, overlap 1499402 CGGTGAGAGCTACAA GCCAATCATCGCAG AAG CTGCGAAGA-TGGC AGTCGGTGAGGAGAA aprA 1498924 - 1500855 + | adenylylsulfate reductase TERM 655 1501255 - 1501271 + G 73 -8.7 -3.68073 | overlap 1501249 TCGCAACTGGGTTGA GAGCCTT TGC AGGGCTC TTGTTAGCTGCGGTG ftsA-2 1500920 - 1502221 + | coenzyme F390 synthetase (ftsA-2) TERM 656 1502279 - 1502263 - g 77 -8.7 -4.08767 | overlap 1502266 CGTATTTGTTGAAAA CAAGCCC GGA AGGCTTG CTGCGGTTACGGAGG AF1672 1502231 - 1502644 + | acetolactate synthase, small subunit, putative AF1673 1502646 - 1503590 + | potassium channel, putative gldA 1504642 - 1503587 - | sn-glycerol-1-phosphate dehydrogenase (gldA) AF1675 1505089 - 1504706 - | hypothetical protein AF1676 1505138 - 1505875 + | NAD-dependent deacetylase AF1677 1507091 - 1505856 - | hypothetical protein TERM 657 1506237 - 1506247 + g 73 -5.4 -4.62069 | GCACGCAAAGTCCCC CTCT TCC AGAG TTTTTAGGCTGCCGA AF1678 1507778 - 1507155 - | hypothetical protein AF1679 1507887 - 1509062 + | vtpJ-therm, putative AF1680 1509663 - 1509070 - | hypothetical protein AF1681 1510243 - 1509605 - | hypothetical protein AF1682 1510405 - 1510644 + | hypothetical protein TERM 658 1510903 - 1510882 - g 71 -5.1 -4.46233 | CGAAGTTGAAAGAAA GGCTCTGGA AGTT TTCAAAGCC AGAGTTTACGAAAAG AF1683 1510628 - 1511098 + | hypothetical protein AF1684 1511125 - 1512534 + | hypothetical protein cooC-2 1512556 - 1513302 + | CODH nickel-insertion accessory protein (cooC-2) AF1686 1513337 - 1513639 + | hypothetical protein AF1687 1513697 - 1514344 + | hypothetical protein AF1688 1515188 - 1514364 - | hypothetical protein TERM 659 1514867 - 1514855 - G 73 -9.1 -3.76839 | TAATTCCAAGGTAAA GCAGC ACT GCTGC CACAAAAGCCTTGAA AF1689 1515345 - 1515566 + | hypothetical protein TERM 660 1515588 - 1515602 + G 73 -2.8 -5.03715 | TGTAATAATCCGCAT TTTCAG GGA CAGAAA TTTTTTCGAAGTGCT vapC-2 1515556 - 1515966 + | virulence associated protein C (vapC-2) TERM 661 1516007 - 1515982 - T 72 -3.3 -5.0432 | opp_overlap 1515984 1515987 1516003, overlap 1515983 1515984 AATAAAAAGAGAAAA TCGAATTTGAG ATTT CTCAAATTCTT TAAAAGGATGGTTTG TERM 662 1515984 - 1516005 + T 79 -10.3 -3.54919 | opp_overlap 1515983 1515982 1515984, overlap 1515987 1516003 TAAAAAGAGAAAATC GAATTTGAG ATTT CTCAAATTC TTTAAAAGGATGGTT TERM 663 1516005 - 1515984 - T 72 -10.3 -2.72919 | opp_overlap 1515984 1515987 1516003, overlap 1515983 1515982 TAAAAAGAGAAAATC GAATTTGAG ATTT CTCAAATTC TTTAAAAGGATGGTT AF1691 1516880 - 1516077 - | hypothetical protein TERM 664 1516737 - 1516716 - G 70 -2.9 -4.81551 | overlap 1516719 CATGTAGAGCAAAAA CATTCCATC GAGA GTTGGATTG GCGACAGAAGGAATG nth 1517506 - 1516877 - | endonuclease III (nth) purM 1517552 - 1518541 + | phosphoribosylaminoimidazole synthetase trpS 1519800 - 1518538 - | tryptophanyl-tRNA synthetase apbA 1519851 - 1520735 + | 2-dehydropantoate 2-reductase TERM 665 1521148 - 1521169 + G 70 -4.5 -4.67256 | gap 1 GTTGTGGTTCTTCTC GCCTCGATTG GAA TAATC-AGGC TTTTATAATTTATTA qacE 1520764 - 1521177 + | small multidrug export protein (qacE) AF1697 1521227 - 1521700 + | hypothetical protein AF1698 1521397 - 1522260 + | hypothetical protein porG 1522363 - 1522938 + | pyruvate ferredoxin oxidoreductase subunit gamma porD 1522935 - 1523228 + | pyruvate ferredoxin oxidoreductase, subunit delta (porD) porA 1523238 - 1524413 + | pyruvate ferredoxin oxidoreductase, subunit alpha (porA) porB 1524410 - 1525294 + | pyruvate ferredoxin oxidoreductase, subunit beta (porB) AF1703 1525291 - 1525917 + | hypothetical protein AF1704 1526729 - 1525914 - | hypothetical protein AF1705 1526866 - 1527765 + | ISA0963-6 transposase pcbD 1528484 - 1527768 - | 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoic acid hydrolase (pcbD) AF1707 1529245 - 1528586 - | hypothetical protein AF1708 1532115 - 1529242 - | type I restriction-modification enzyme, R subunit TERM 666 1530764 - 1530744 - G 79 -12.7 -3.15249 | TATACTCCTCAGGAA TCTCCTCAA GCT TTGAGGAGA GGAAGATTTCCAGAT AF1709 1533151 - 1532237 - | hypothetical protein TERM 667 1532885 - 1532864 - G 74 -2.3 -5.15969 | overlap 1532865 GCTCAATCCAAAAAA CGCTAAAAC ATAA GCTTTAACA TATTTCTCCACAGCT AF1710 1534169 - 1533144 - | type I restriction-modification enzyme, S subunit AF1711 1534864 - 1534421 - | hypothetical protein TERM 668 1534449 - 1534459 + g 79 -6.8 -4.67904 | TTCAGCTTTCCAATC GCCT CTA AGGC TTTTTCAAGTTCATC AF1712 1535066 - 1534851 - | hypothetical protein AF1713 1535363 - 1535184 - | hypothetical protein AF1714 1535648 - 1535466 - | hypothetical protein TERM 669 1535572 - 1535588 + g 74 -6.6 -4.37658 | TCATTGAAGAATTTG GCAGTT TCCTC AACTGC TTTTCTAAACGCCTT AF1715m 1537255 - 1535730 - | type I restriction-modification enzyme, M subunit estA 1537707 - 1538642 + | carboxylesterase (estA) AF1717 1539061 - 1538639 - | hypothetical protein TERM 670 1539077 - 1539088 + r 73 -2.2 -5.3321 | CTAAAAATAAAAAGA GAGG TTTA CTTC TTTTTCTTCTTGATT AF1718 1539282 - 1539082 - | hypothetical protein ilvH 1539821 - 1539342 - | acetolactate synthase 3 regulatory subunit ilvB-1 1541489 - 1539831 - | acetolactate synthase 3 catalytic subunit TERM 671 1540556 - 1540569 + g 100 -6.7 -5.34055 | CTCCGACTATAGGGA CGTCA ACTC TGACG TTTTTTCCTATTTCT TERM 672 1541096 - 1541137 + g 74 -11.7 -2.76721 | overlap 1541108 TGCCCAGAAGGTCTT TGGTGTCCGTAACCAGGTA GTTG TGCTTGGTTATGGGCATCG TGATTCCGGTTATGT TERM 673 1541802 - 1541825 + G 73 -5.3 -4.74801 | opp_overlap 1541802 1541800, overlap 1541804 ACAACGCGTTAAACA GGGCTGAAT TGGTTC ATTCAGCAC TTTTTCATGAGGTTG AF1721 1541672 - 1543258 + | signal-transducing histidine kinase TERM 674 1544072 - 1544062 - g 76 -5.4 -4.82901 | opp_overlap 1544062 TCCCCTTTACAAAAA GGTT GCA AACC TTCAGTACCTCCCGA AF1722 1543445 - 1546876 + | DNA polymerase II large subunit TERM 675 1546961 - 1546938 - g 74 -7.4 -4.20148 | AGGATTTGAAAATAA TCGAGCTGCT CGTA AGCAACGCGA GGATTCCGAAAACGA AF1723 1546913 - 1547329 + | AsnC family transcriptional regulator draG 1547356 - 1548273 + | dinitrogenase reductase activating glycohydrolase (draG) AF1725 1549211 - 1548270 - | DNA ligase, putative TERM 676 1549174 - 1549189 + g 86 -3.2 -5.60993 | overlap 1549175 GGCTTTGACCTGACA GCAAGC ATCG GCTTGA TTTTTTTATCGAACC AF1726 1550068 - 1549208 - | hypothetical protein TERM 677 1551391 - 1551381 - gH 73 -6.8 -4.2338 | opp_overlap 1551381, overlap 1551374 1551378 GAGGAAGATAAAGAA GCTC TAC GAGC TTGGGTTTATCAAGG mae 1550050 - 1551420 + | malate oxidoreductase (mae) AF1728 1551498 - 1552568 + | galactosyltransferase AF1729 1552611 - 1553543 + | hypothetical protein truA 1554318 - 1553521 - | tRNA pseudouridine synthase A TERM 678 1553684 - 1553704 + g 70 -8.2 -3.68359 | ATTAGACCGTAAGGT GGAGCGGG CTCGA CCCTCTCC TTGTGCTTTTCCGGG AF1731 1554626 - 1554315 - | hypothetical protein gap 1555670 - 1554648 - | glyceraldehyde-3-phosphate dehydrogenase TERM 679 1555416 - 1555433 + g 71 -7.7 -4.07885 | CTTGTTCGGGCTGCA GTCGACA ACGA TGTCGGC TTTTGGCAGCAAATC AF1733 1555804 - 1555667 - | hypothetical protein TERM 680 1556608 - 1556624 + GH 72 -8.7 -3.46602 | opp_overlap 1556606 1556605 GCTTGAGGACAAGCT CCTCAGG AGG CTTGAGG TTCTGCTGTCCGCGA AF1734 1555691 - 1557535 + | hypothetical protein TERM 681 1557566 - 1557548 - fH 83 -6 -5.02074 | overlap 1557551 TGAGCTGGTAAAAAA GGACATCA GGC TGATGTTC AGGGAGAGAACCTTC TERM 682 1558158 - 1558170 + G 71 -5.5 -4.46212 | overlap 1558156 TCGATGGCCAAGGTG GCGTC GCC GATGC TTTTCTCCTCCACCG TERM 683 1558419 - 1558459 + G 76 -12.6 -2.66711 | opp_overlap 1558440 1558443 1558444, overlap 1558418 GTGATGGTTGGAAGG GCTGCGGCAGGGGCAG AGATAGAAC CTGCTGTTGCCGCAGC ATTCTCCGTTCTGGC AF1735 1557561 - 1558520 + | hypothetical protein mvaA 1559833 - 1558523 - | 3-hydroxy-3-methylglutaryl-coenzyme A reductase (mvaA) AF1737 1561701 - 1559773 - | hypothetical protein TERM 684 1560293 - 1560277 - GH 80 -10.1 -3.66178 | overlap 1560280 CTGCGTAACCTCAAA GAGGGCC AGA AGCCCTC TGGCAAAGAAGATGT AF1738 1561771 - 1562985 + | hypothetical protein AF1739 1564072 - 1562966 - | hypothetical protein AF1740 1564162 - 1564701 + | hypothetical protein pyrE 1564695 - 1565231 + | orotate phosphoribosyl transferase (pyrE) AF1742 1566455 - 1565190 - | hypothetical protein TERM 685 1565533 - 1565543 + gF 79 -6.8 -4.52703 | GCTATCGCCCTCAAC TCCC CCA GGGA TTTTATCATGCTTTC TERM 686 1566438 - 1566428 - Gg 100 -6.8 -5.33785 | AAGCAGGATAAAAAA GCTC AAA GAGC TGGGTGTTATAAGCC AF1743 1566291 - 1566866 + | AsnC family transcriptional regulator pgsA-2 1566913 - 1567431 + | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (pgsA-2) AF1745 1567955 - 1567428 - | hypothetical protein TERM 687 1568852 - 1568873 + G 74 -7.3 -4.15143 | AATGCGGGTTCAACT CTGTCAGCT CACG AGCTGAGAG TTTCTATAATTGCTT amt-2 1568078 - 1569484 + | ammonium transporter (amt-2) glnB-2 1569481 - 1569819 + | nitrogen regulatory protein P-II (glnB-2) TERM 688 1569801 - 1569814 + F 80 -8.1 -4.35327 | CAGGACAGGGGAGAG GGGAG ACGA CTCCC TTTAATTTTTGATGA AF1748 1569826 - 1570536 + | hypothetical protein TERM 689 1570884 - 1570895 + G 73 -5.8 -4.45765 | AGGAACGTTAGCATG TCCG ATTA CGGA TTTGTTGCTTTTCAG amt-3 1570632 - 1571798 + | ammonium transporter (amt-3) glnB-3 1571776 - 1572138 + | nitrogen regulatory protein P-II (glnB-3) bcpC-2 1573394 - 1572168 - | cofactor-independent phosphoglycerate mutase TERM 690 1572734 - 1572755 + g 73 -5.1 -4.60924 | gap 1, opp_overlap 1572731 1572734 CTCCCCTCAAAAGCA GGGC-GTTGG CCT TCAGCAGCCC TTTTTCAGCCCTTTC AF1752 1574885 - 1573404 - | carbohydrate kinase AF1753 1575664 - 1574864 - | lysophospholipase AF1754 1576006 - 1575704 - | hypothetical protein AF1755 1576655 - 1575996 - | hypothetical protein AF1756 1577076 - 1576771 - | hypothetical protein AF1757 1577613 - 1577239 - | hypothetical protein AF1758 1578204 - 1577623 - | hypothetical protein TERM 691 1578385 - 1578366 - RH 71 -5 -4.53774 | opp_overlap 1578365 1578356, overlap 1578356 ATAAACCAACGAAAA CGTTCGAA AATC TTTGAACG AATTCGTAAGGCTTA TERM 692 1578418 - 1578429 + rH 76 -7.2 -4.27443 | AATTTTTGGACTCTT GCGC TATT GCGC TTATTTTACTGCTGA AF1759 1579758 - 1578754 - | hypothetical protein TERM 693 1579019 - 1579033 + gH 83 -2.8 -5.38047 | opp_overlap 1578989, overlap 1578997 AACTCCATGACGCTC TCCC AGTTCTC GGGA TTTTTTATATCCCTG TERM 694 1580015 - 1580001 - gH 70 -2.8 -4.75309 | opp_overlap 1580003, overlap 1579991 1580003 GCAAATTCAAGAAAA TACTTC TTG GAAGTG TCTCGGAGGGAGTTC AF1760 1579655 - 1580467 + | hypothetical protein leuD 1580464 - 1580961 + | 3-isopropylmalate dehydratase small subunit AF1762 1581118 - 1580933 - | hypothetical protein TERM 695 1581501 - 1581521 + G 70 -9.7 -3.30124 | opp_overlap 1581500 GACTTGGGAGCGAAT TCGGGCTGA ACA TCAGCCAGA TTATCGACCCTGAAA AF1763 1581257 - 1582681 + | lipase, putative AF1764 1583151 - 1582678 - | dCMP deaminase, putative AF1765 1583900 - 1583148 - | hypothetical protein TERM 696 1585195 - 1585184 - g 71 -5.8 -4.40804 | GAGGAGCTGAGAAAA GCTC TGGA GAGC TACGAGTATCTATGG AF1766 1583975 - 1585762 + | amino-acid ABC transporter, periplasmic binding protein/protein kinase dppA 1587385 - 1585823 - | dipeptide ABC transporter, dipeptide-binding protein (dppA) TERM 697 1587568 - 1587528 - H 79 -3.3 -5.39905 | gap 1, opp_overlap 1587528 1587527 ATGAAACAAGAAAAA GGAAGAGAGGCTTTAGCA TCAACG TG-TAGTGCCACTCTTCC GTTAATTATTTCTCC dppB 1587697 - 1588761 + | dipeptide ABC transporter, permease protein (dppB) dppC 1588771 - 1589631 + | dipeptide ABC transporter, permease protein (dppC) dppD 1589628 - 1590569 + | dipeptide ABC transporter, ATP-binding protein (dppD) TERM 698 1590781 - 1590758 - g 71 -11 -2.83271 | overlap 1590740 1590755 CGACGGGCAGAATCA TCGTCGGACT GGAA AGGCCGACGA GCGGGAAGATTTACT dppF 1590574 - 1591545 + | dipeptide ABC transporter, ATP-binding protein (dppF) TERM 699 1591969 - 1591957 - g 73 -9.1 -3.6715 | opp_overlap 1591956 1591957 CTACGGAATTTTAAA GGTCG GCG CGACC GTTGTGCAGTGCAAC fadD-7 1591628 - 1593337 + | long-chain-fatty-acid--CoA ligase (fadD-7) TERM 700 1593356 - 1593371 + F 71 -6.2 -4.18018 | TTATCTTTTTCTTTA GCATTT TTAG AAATGC TTTTAAATCACCAAA AF1773 1593421 - 1594575 + | iron-sulfur binding reductase TERM 701 1595917 - 1595904 - g 70 -3.1 -4.90455 | gap 1, overlap 1595905 AGAGAGGGAGAAAAA CCTCAG AAA CTG-GG AGGAGTGGATTCCTG cat-2 1594606 - 1596201 + | cationic amino acid transporter (cat-2) AF1775 1597194 - 1596202 - | atrazine chlorohydrolase, putative AF1776 1597267 - 1597389 + | hypothetical protein AF1777 1598123 - 1597386 - | hypothetical protein spoVG 1598229 - 1598486 + | stage V sporulation protein (spoVG) TERM 702 1598498 - 1598514 + F 78 -3.7 -5.32599 | overlap 1598500 GTAGTTAAGAGTTTG GCTTTTG CTT CAAAACC TTTTTATCTTTTCTG AF1779 1598544 - 1599515 + | 2-hydroxyacid dehydrogenase, putative ilvB-2 1599520 - 1601157 + | acetolactate synthase, large subunit (ilvB-2) nfeD 1601171 - 1602505 + | nodulation protein NfeD (nfeD) AF1782 1602456 - 1602686 + | hypothetical protein ksgA 1602673 - 1603407 + | dimethyladenosine transferase (ksgA) hemK 1603404 - 1603937 + | protoporphyrinogen oxidase (hemK) AF1785 1604493 - 1603918 - | iron-dependent repressor AF1786 1605080 - 1604547 - | hypothetical protein AF1787 1605999 - 1605070 - | hypothetical protein mtaP 1606764 - 1606033 - | methylthioadenosine phosphorylase (mtaP) gptA-2 1607372 - 1606761 - | xanthine-guanine phosphoribosyltransferase (gptA-2) AF1790 1608840 - 1607374 - | DNA polymerase II small subunit TERM 703 1608041 - 1608053 + g 73 -3.3 -4.93877 | overlap 1608036 TACTTAACCTTCTCA GCGAG ATT CTGGC TTTTCTTTCCTCCAA sec11 1608860 - 1609429 + | signal sequence peptidase (sec11) AF1792 1609468 - 1609881 + | hypothetical protein AF1793 1609904 - 1610116 + | repressor protein ino1 1611299 - 1610121 - | myo-inositol-1-phosphate synthase (ino1) TERM 704 1610548 - 1610596 + g 84 -10.4 -4.0896 | overlap 1610551 ATGTTGTAGCTCATC CAGCCCACGACCTCCATGTTT-CT GTA GGCGAACATGGGGG-CGAGGGTTG TTTTGACCAGCGTTT TERM 705 1610551 - 1610593 + g 76 -8.5 -4.17048 | overlap 1610548 TTGTAGCTCATCCAG CCCACGACCTCCATGTTT-CT GTA GGCGAACATGGGGG-CGAGGG TTGTTTTGACCAGCG TERM 706 1610603 - 1610617 + g 71 -7 -4.17023 | overlap 1610615 CGAGGGTTGTTTTGA CCAGCG TTT CGCCGG TTTTGCCGTCATTGC celM 1612285 - 1611371 - | endoglucanase (celM) AF1796 1612966 - 1612415 - | hypothetical protein TERM 707 1612658 - 1612672 + g 90 -5.7 -5.3671 | CGCAACAAGCTTCGA GCCAA TGTCC TTGGC TTTTTTGCTTATGTT AF1797 1613985 - 1613020 - | phosphate regulatory protein, putative TERM 708 1614721 - 1614736 + GH 73 -5.4 -4.63932 | overlap 1614715 GGCTACAGCGGTGGA GTACCT TTCT GGGTAC TTTTCTTCGGCGGTC AF1798 1614073 - 1615074 + | phosphate permease, putative AF1799 1615002 - 1615751 + | hypothetical protein AF1800 1616738 - 1615716 - | hypothetical protein TERM 709 1616316 - 1616328 + g 71 -5.5 -4.56978 | opp_overlap 1616315 AAAGTTCAGAATCAG GAGGG TTG CCTTC TTTGTTATTTCAACC AF1801 1617421 - 1616741 - | hypothetical protein TERM 710 1617840 - 1617851 + r 79 -5.8 -4.88388 | TTACTGTAATCTCCT TGGG CCTT CCCA TTTTTATCAGCTTCT AF1803 1619616 - 1618684 - | hypothetical protein AF1804 1619667 - 1620443 + | hypothetical protein AF1805 1620436 - 1620981 + | putative RNA-processing protein TERM 711 1622473 - 1622489 + G 76 -6.5 -4.57353 | ACGGTAACCCCTTCA GGCCG AGCGAAA CGGCC TTTTCTGTAATAAAC topA 1620972 - 1622963 + | DNA topoisomerase I AF1807 1623268 - 1622960 - | hypothetical protein AF1808 1623389 - 1623616 + | hypothetical protein AF1809 1623965 - 1623699 - | hypothetical protein TERM 712 1624258 - 1624238 - g 76 -6.1 -4.69464 | overlap 1624240 AAAAGACGGCAAAAA CTCTGCATG GAG CATACAGCG TGAAGAAGGTGAAAG AF1810 1623982 - 1624761 + | hypothetical protein AF1811 1624758 - 1625231 + | inosine monophosphate cyclohydrolase AF1812 1625218 - 1625751 + | hypothetical protein AF1813 1627678 - 1626329 - | TBP-interacting protein TIP49 AF1814 1627762 - 1628118 + | hypothetical protein TERM 713 1628214 - 1628232 + G 70 -3 -4.88736 | TTTTTCAAAGCACGT CTCGCCCT ACA AGGCCAAG TTTTTCTCAATGGTG argD-2 1628155 - 1629429 + | acetylornithine aminotransferase (argD-2) TERM 714 1630134 - 1630145 + G 76 -5.8 -4.59773 | opp_overlap 1630134 1630133 CCCATAGCTATTAAC CTCG CCAA CGAG TTTTTCAAGCTCAAC AF1816 1629426 - 1630328 + | hypothetical protein AF1817 1630468 - 1630977 + | TetR family transcriptional regulator AF1818 1630974 - 1632410 + | hypothetical protein AF1819 1632411 - 1633106 + | ABC transporter, ATP-binding protein TERM 715 1633144 - 1633122 - gT 75 -5.6 -4.72986 | overlap 1633097 CATTTTGAGGAAAAA GCTCCTCA GGGACAT TAAGGAGC AGAAGGGGCTTTTTG TERM 716 1633849 - 1633824 - gT 73 -7.5 -3.9712 | overlap 1633825 1633839 TCAGGTGAGCAGAAA GCTCCTCAAGG AAGA CCTTGAGGGGT TCAGGGGACTGGCAG TERM 717 1633848 - 1633825 - gT 78 -11 -2.97951 | overlap 1633824 1633839 CAGGTGAGCAGAAAG CTCCTCAAGG AAGA CCTTGAGGGG TTCAGGGGACTGGCA TERM 718 1634989 - 1635009 + GT 72 -3.9 -4.89393 | opp_overlap 1634989 1634990, overlap 1634990 ATAGAGGCACAGGAA TCCATTGAG GAG CTCATGGGA TTTTTCTACGCTTTC TERM 719 1635191 - 1635205 + GT 70 -4.2 -4.74103 | AAAACCTGTTTGTTG CAATCC TCG GGCTTG TTTTTGCCTTACCAA AF1820 1633042 - 1635417 + | hypothetical protein AF1821 1635664 - 1635419 - | hypothetical protein ppa 1635714 - 1636520 + | serine/threonine phosphatase (ppa) TERM 720 1636508 - 1636520 + F 76 -3.5 -5.23316 | overlap 1636505 AAAATTTGGTTCCAT TTATA ATG TATAA TTTTTTCATGTAATA AF1823 1636594 - 1637058 + | F420H2:quinone oxidoreductase, 16.5 kDa subunit, putative AF1824 1637055 - 1637375 + | F420H2:quinone oxidoreductase, 11.2 kDa subunit, putative nuoM 1637372 - 1638835 + | F420H2:quinone oxidoreductase, 53.9 kDa subunit (nuoM) nuoL 1638832 - 1640781 + | F420H2:quinone oxidoreductase, 72.4 kDa subunit (nuoL). AF1827 1640769 - 1641983 + | F420H2:quinone oxidoreductase, 43.2 kDa subunit, putative AF1828 1641987 - 1642361 + | NADH dehydrogenase subunit A AF1829 1642345 - 1643406 + | F420H2:quinone oxidoreductase, 39.7 kDa subunit, putative TERM 721 1644235 - 1644256 + G 79 -12.3 -3.32066 | opp_overlap 1644232, overlap 1644225 TCACGTGGGAAATGC CCGTCTCTG ATGC CGGAGACGG TTATGCGAGGTTCTT nuoD 1643403 - 1644644 + | NADH dehydrogenase subunit D AF1831 1644646 - 1645755 + | NADH dehydrogenase subunit H AF1832a 1645752 - 1646198 + | NADH dehydrogenase subunit I TERM 722 1646289 - 1646323 + F 85 -11.5 -3.30007 | gap 1, opp_overlap 1646281 1646308 AGGAAAGGAAGGCTG CCTGC-ACTGAGCCAG AAAG CTGCCTCGGTTGCAGG TTGTGCGCCAATGTT TERM 723 1647472 - 1647432 - g 73 -5.3 -4.5954 | overlap 1647435 CTACATCAGAGAAAA GGACTACGCCGAGTTTGGC GAG GCGAAGCTCGACATCGTGC AGAAGCTCTGCGACC AF1833 1646407 - 1647546 + | F420H2:quinone oxidoreductase, 39 kDa subunit, putative AF1834 1648117 - 1647548 - | hypothetical protein AF1835 1648947 - 1648114 - | hypothetical protein nadA 1650013 - 1650914 + | quinolinate synthetase AF1838 1650908 - 1651618 + | hypothetical protein nadC 1651663 - 1652439 + | nicotinate-nucleotide pyrophosphorylase (nadC) map 1652470 - 1653345 + | methionine aminopeptidase cbiO-2 1654054 - 1653338 - | cobalt transport ATP-binding protein (cbiO-2) cbiQ-2 1654770 - 1654039 - | cobalt transport protein (cbiQ-2) cbiM-2 1655575 - 1654754 - | cobalamin biosynthesis protein (cbiM-2) AF1844 1656011 - 1655739 - | hypothetical protein AF1845 1656838 - 1655972 - | hypothetical protein AF1846 1657343 - 1656933 - | hypothetical protein AF1847 1657788 - 1657537 - | hypothetical protein AF1848 1658030 - 1657839 - | hypothetical protein cooS 1658040 - 1659908 + | carbon monoxide dehydrogenase, catalytic subunit (cooS) TERM 724 1660552 - 1660534 - g 74 -7.4 -4.18197 | ATGCGGCATTGAAAA CCCTTAAG AGG CTGAAGGG GCTGAAGGTTGATTA AF1850 1659954 - 1660829 + | hypothetical protein TERM 725 1661102 - 1661090 - g 76 -4.8 -4.9448 | overlap 1661085 AGCGATGAAACAAAA GCAG CCCTT CTGC AGCGATACGATGTCA AF1851 1660826 - 1661830 + | hypothetical protein AF1852 1662960 - 1661908 - | hypothetical protein TERM 726 1662647 - 1662674 + g 70 -2 -5.055 | overlap 1662651 GTGTAAGCTATAACT TCGAGGTTTATG CTTC TGTAAACCCTGA TTTTTTCACCATTGA TERM 727 1663337 - 1663326 - g 70 -4.4 -4.72846 | opp_overlap 1663318, overlap 1663318 TTAGAGACGTAAAAA CGTA CGTT TACG ATAAAGAGGGGATAA AF1853 1663061 - 1663402 + | ArsR family transcriptional regulator cat2-2 1664846 - 1663422 - | 4-hydroxybutyrate CoA transferase (cat2-2) entE 1665027 - 1666700 + | 2,3-dihydrosybenzoate-AMP ligase (entE) TERM 728 1666738 - 1666752 + F 80 -2.2 -5.67283 | overlap 1666736 AAATAACACATTCTC TTATTT TAA GAATAA TTTTTTATTTAAATT TERM 729 1667777 - 1667787 + G 73 -5.4 -4.66264 | TATAGACTCAATGGC TCTC AAC GAGA TTTTTGCAGGTTTTG AF1856 1666836 - 1668680 + | hypothetical protein noxA-5 1671221 - 1669875 - | NADH oxidase (noxA-5) AF1859 1672236 - 1671367 - | hypothetical protein AF1860 1672417 - 1672244 - | hypothetical protein AF1861 1673731 - 1672700 - | hypothetical protein TERM 730 1672764 - 1672786 + g 74 -2 -5.06735 | overlap 1672765 1672783 GCCCCTACTCCGAAT TTCTTCAAAG CCT CTTTGAGCAG TTTTTCTGCTTTCTC TERM 731 1673395 - 1673413 + g 74 -4.4 -4.81814 | opp_overlap 1673396, overlap 1673396 CACTCTCATCACCCA ACCCGACT ACA AGGCGGGA TTTTGTTCTCATGCT AF1862 1674195 - 1673728 - | hypothetical protein AF1863 1675243 - 1674176 - | hypothetical protein AF1864 1675541 - 1675227 - | hypothetical protein AF1865 1676487 - 1675522 - | hypothetical protein AF1866 1677513 - 1676488 - | hypothetical protein TERM 732 1676989 - 1677009 + g 75 -9.1 -3.93401 | overlap 1677000 GTCGGAGAACCTTAG CATTTCTAC TTG GTAGAAGTG TTCTTCCTTTGTAAC AF1867 1680524 - 1677510 - | hypothetical protein TERM 733 1677734 - 1677713 - GR 73 -5.9 -4.57073 | opp_overlap 1677714, overlap 1677714 GACCTCTGGCAAAAA CTGACTGAA ACTC TTCAGCCAA ATTTTTATCTATAGA TERM 734 1678895 - 1678868 - GR 71 -5 -4.57569 | gap 1 CTACCCCTTCAAAAA TATCCAGAGTCTC AAT GA-ACTTTGGATA GAACCTTTTAACAGC TERM 735 1679617 - 1679607 - GR 72 -4.6 -4.7078 | opp_overlap 1679615, overlap 1679609 CCAAGCATGGAAAAA GGGA TTT CCCC TCAAGTGAGGATATA TERM 736 1680155 - 1680168 + gr 70 -9.5 -2.63614 | overlap 1680152 CGTACTCCTTAATCT CCCCG GTTA CGGGG TGCCTTATAATTGGT TERM 737 1680189 - 1680200 + gr 70 -3 -4.76312 | TATAATTGGTTGGCC TATG TACT CATA TTTTTCCGTGTTGTG AF1868 1681450 - 1680461 - | hypothetical protein TERM 738 1680614 - 1680634 + gr 91 -4.7 -5.65177 | opp_overlap 1680618, overlap 1680616 1680618 TGTTATCCCGACTTT AATAGGAGA TGC TCTCCTGTC TTTTTTTGTACCTCT TERM 739 1680616 - 1680632 + gr 79 -7.3 -4.46105 | opp_overlap 1680618, overlap 1680614 1680618 TTATCCCGACTTTAA TAGGAGA TGC TCTCCTG TCTTTTTTTGTACCT TERM 740 1680618 - 1680630 + gr 73 -7.7 -3.81806 | opp_overlap 1680618, overlap 1680616 1680614 ATCCCGACTTTAATA GGAGA TGC TCTCC TGTCTTTTTTTGTAC AF1869 1682143 - 1681502 - | hypothetical protein AF1870 1682222 - 1682572 + | hypothetical protein AF1871 1682556 - 1683515 + | hypothetical protein AF1872 1683512 - 1684312 + | hypothetical protein TERM 741 1684407 - 1684389 - g 70 -2.4 -5.00616 | CCTCTCTGGAAAAAA GCTTGCAA AGT TTGAAAAC GGAGAGCTCTTGATT AF1873 1684300 - 1685472 + | hypothetical protein TERM 742 1686941 - 1686895 - g 74 -2.5 -5.1675 | gap 1, overlap 1686899 TTATTGAGGAAAAAA GAAGGTCCTCGAAGGTTCCA GTATCCTT TGAAACTTTCAAGAAC-TTC AAGGTTTATGGCTGC AF1874 1685466 - 1687106 + | hypothetical protein TERM 743 1687266 - 1687286 + G 72 -3.9 -4.90525 | overlap 1687267 1687268 TGAAGCTTGCCATTA TTTTCCACG ATA CGGGGAAGG TTTTCTTTCAGATTA TERM 744 1687795 - 1687779 - g 82 -7.3 -4.69053 | GAGGAGGTAACAAAA CACCCTT CGG AAGAGTG GTGGAGGAGTTCAGC AF1875 1687103 - 1687828 + | hypothetical protein AF1876 1687858 - 1688142 + | hypothetical protein AF1877 1688733 - 1688164 - | hypothetical protein AF1878 1689745 - 1688708 - | hypothetical protein AF1879 1690587 - 1689742 - | hypothetical protein AF1880 1691723 - 1691848 + | hypothetical protein AF1881 1692771 - 1692028 - | hypothetical protein AF1882 1694202 - 1693606 - | hypothetical protein drrB 1695219 - 1694464 - | daunorubicin resistance membrane protein (drrB) TERM 745 1694811 - 1694795 - G 74 -4.3 -4.90079 | ACCGCAAGAACAAAA CCTACTC CGA GAGCGGG AATCACACCGAATAT drrA 1696418 - 1695222 - | daunorubicin resistance ATP-binding protein (drrA) TERM 746 1696298 - 1696328 + gH 100 -13.2 -4.09864 | opp_overlap 1696293, overlap 1696316 1696318 CGCTAATGGATGAGG GCTCGTAGCTCAGC CAG GCAGAGCGACGGGC TTTTAACCCGTCGGT rpoH 1696393 - 1696623 + | DNA-directed RNA polymerase subunit H TERM 747 1697340 - 1697305 - g 72 -8.4 -3.86346 | gap 1 TTATTGTGGTAGAAA GGGGGAGAAACAACATC TTG GAGGTTACTT-TCCCCC AGCTCCCCAAGCCAA TERM 748 1697843 - 1697821 - g 70 -9.9 -3.32727 | CGAAGATCAGAGGAA GGCCGTTGA AGATG TCAACAGCC GTGAGAAGCGACGTT rpoB2 1696656 - 1698194 + | DNA-directed RNA polymerase subunit beta'' rpoB1 1698195 - 1700009 + | DNA-directed RNA polymerase subunit B' TERM 749 1701497 - 1701512 + G 73 -9 -3.71527 | opp_overlap 1701496 ATTGGTGGAATTCAC GACCAC ATAA GTGGTC TTTACCTGCTTACGA rpoA1 1700021 - 1702624 + | DNA-directed RNA polymerase subunit alpha rpoA2 1702621 - 1703763 + | DNA-directed RNA polymerase subunit A'' rpl30E 1703760 - 1704020 + | 50S ribosomal protein L30E (rpl30E) nusA 1704036 - 1704455 + | transcription elongation factor NusA-like protein rps12P 1704455 - 1704889 + | 30S ribosomal protein S12P rps7P 1704894 - 1705478 + | 30S ribosomal protein S7P fus 1705484 - 1707670 + | elongation factor EF-2 AF1895 1707687 - 1708316 + | hypothetical protein isf-3 1708350 - 1708955 + | iron-sulfur flavoprotein (isf-3) AF1897 1710019 - 1708952 - | hypothetical protein TERM 750 1710406 - 1710391 - g 79 -5.4 -5.04385 | opp_overlap 1710393 TACATTCTCAAAAAA CCCTTC ACCA GAAAGG AGGTGGTGGAGCTTA AF1898 1710094 - 1710447 + | response regulator AF1899 1710490 - 1711689 + | DNA primase cmk 1712212 - 1711670 - | cytidylate kinase AF1901 1712879 - 1712214 - | hypothetical protein TERM 751 1712568 - 1712588 + g 82 -8.3 -4.54323 | overlap 1712569 TTCGTTCTTTTTCTG CTCAAGCTG CTT CAGCTTGAA TTTGTTGTTCTGCTT TERM 752 1712569 - 1712587 + g 79 -11.8 -3.30967 | overlap 1712568 TCGTTCTTTTTCTGC TCAAGCTG CTT CAGCTTGA ATTTGTTGTTCTGCT TERM 753 1712849 - 1712839 - G 73 -3.2 -4.96773 | overlap 1712841 CCAATGAAAAATAAA GCTC CAA GAAC CATTATGAACCTTGA secY 1714357 - 1712876 - | preprotein translocase subunit SecY TERM 754 1714042 - 1714060 + g 74 -4.6 -4.77165 | AAGCTGCCCTGTCTT CTGGATTT GTC AAATCAAG TTTTATTATGCCGGC rpl15P 1714911 - 1714372 - | 50S ribosomal protein L15P (rpl15P) rpl30p 1715366 - 1714908 - | 50S ribosomal protein L30P TERM 755 1715039 - 1715057 + g 71 -6.7 -4.18018 | overlap 1715015 CTGGCTTGAGATCAG GCAAGTC CTTAA GGCTTGC TTTTCCCTCGACCAC rps5p 1715968 - 1715372 - | 30S ribosomal protein S5P rpl18p 1716528 - 1715965 - | 50S ribosomal protein L18P rpl19e 1716983 - 1716534 - | 50S ribosomal protein L19e rpl32e 1717369 - 1716980 - | 50S ribosomal protein L32e rpl6P 1717969 - 1717379 - | 50S ribosomal protein L6P (rpl6P) rps8p 1718315 - 1717920 - | 30S ribosomal protein S8P rps14P 1718470 - 1718315 - | 30S ribosomal protein S14P rpl5p 1719003 - 1718467 - | 50S ribosomal protein L5P rps4E 1719714 - 1719007 - | 30S ribosomal protein S4e TERM 756 1719219 - 1719235 + g 71 -7.9 -4.10429 | CTTCCTCGAACTTGA GGTGGTC AAC GACCTCC TTTTCGGGAATCCTT rpl24p 1720073 - 1719711 - | 50S ribosomal protein L24P rpl14p 1720482 - 1720084 - | 50S ribosomal protein L14P rps17p 1720798 - 1720463 - | 30S ribosomal protein S17P TERM 757 1720706 - 1720742 + g 76 -7.4 -4.30844 | gap 1, opp_overlap 1720706 CTTGCCGCGAAGCAA CTGTCC-TCTCACTGAA AGCG TTCCGTGAAACGGACAG TTTTCATCCTCACAT TERM 758 1720742 - 1720706 - G 70 -9.6 -3.33696 | gap 1, opp_overlap 1720706 CTTGCCGCGAAGCAA CTGTCC-TCTCACTGAA AGCG TTCCGTGAAACGGACAG TTTTCATCCTCACAT AF1917 1721103 - 1720795 - | hypothetical protein rpl29P 1721285 - 1721079 - | 50S ribosomal protein L29P (rpl29P) rps3p 1721895 - 1721206 - | 30S ribosomal protein S3P rpl22p 1722362 - 1721895 - | 50S ribosomal protein L22P rps19p 1722763 - 1722362 - | 30S ribosomal protein S19P rpl2p 1723481 - 1722768 - | 50S ribosomal protein L2P TERM 759 1723423 - 1723445 + g 71 -5.5 -4.44819 | TTATACCTGTGAGAT GGAGCCCTG TATGT TGGGGTTCC TTTTCCTCTATTCTG rpl23P 1723744 - 1723493 - | 50S ribosomal protein L23P (rpl23P) rpl4lp 1724490 - 1723732 - | 50S ribosomal protein L4P rpl3p 1725488 - 1724493 - | 50S ribosomal protein L3P AF1926 1726255 - 1725485 - | hypothetical protein TERM 760 1725748 - 1725764 + g 73 -5.1 -4.61231 | overlap 1725752 TTTTCCTCTTTACCA GCTCC TCCAGAC GGAGC TTTTTCACCCTGTAA AF1927 1726933 - 1726313 - | hypothetical protein fwdD-2 1727076 - 1727444 + | tungsten formylmethanofuran dehydrogenase, subunit D (fwdD-2) TERM 761 1728555 - 1728529 - g 70 -10.2 -3.01791 | opp_overlap 1728529 ACCCCTTCCCCAACA TGACGACCCTTG TTG CAAATGTCGTCA TTCCCTCAGCGGTTG fwdB-2 1727445 - 1728710 + | tungsten formylmethanofuran dehydrogenase, subunit B (fwdB-2) fwdA 1728714 - 1730405 + | tungsten formylmethanofuran dehydrogenase, subunit A (fwdA) TERM 762 1730738 - 1730714 - g 73 -5.7 -4.56597 | opp_overlap 1730713 TGGCGGGCGGAAAAA TCGTCATCG AGGGCAA CGCTGACGA CTGGCTTGGGGCAGA fwdC 1730410 - 1731123 + | tungsten formylmethanofuran dehydrogenase, subunit C (fwdC) TERM 763 1731319 - 1731302 - g 73 -5.6 -4.62622 | TCAAGGACAAAGAAA TCAGCT ACGGTG AGCTGA AGGAGAATGCTAATC TERM 764 1731587 - 1731569 - g 87 -4.6 -5.39681 | overlap 1731558 ACAATCAAAGAAAAA TCCTTGAT GAA ATAAAGGA AGAGATCGGAAACCC TERM 765 1732498 - 1732485 - g 79 -6.7 -4.72272 | overlap 1732492 GGTTGTGATGAAAAA TCCCA AAGT TGGGA TAGCTGCAGCCTTCG fadD-8 1731208 - 1732737 + | long-chain-fatty-acid--CoA ligase (fadD-8) AF1933 1733197 - 1732712 - | monoamine oxidase regulatory protein, putative AF1934 1734096 - 1733245 - | hypothetical protein mch 1735125 - 1734175 - | N(5),N(10)-methenyltetrahydromethanopterin cyclohydrolase AF1936 1735858 - 1735175 - | hypothetical protein minD-2 1736652 - 1735894 - | cell division inhibitor (minD-2) AF1938 1736765 - 1738786 + | hypothetical protein AF1939 1738893 - 1738777 - | hypothetical protein purL 1741349 - 1739052 - | phosphoribosylformylglycinamidine synthase II TERM 766 1739606 - 1739617 + g 71 -7.2 -3.9941 | overlap 1739606 GAGTGGGAGCAACGG CCCC GTAG GGGG TTTCGTTGTAGAAGC AF1941 1741596 - 1741354 - | hypothetical protein TERM 767 1741714 - 1741704 - H 81 -2.6 -5.68023 | overlap 1741695 TTATAAGTAAAAAAA TTTT ACT AAAA TAAAAATTGAGGATA TERM 768 1741744 - 1741721 - H 76 -2.4 -5.50723 | TTACTAAAATAAAAA TTGAGGATAG CTTG CTGTTCTCAA CTAAGGGTGGTTGAA TERM 769 1743228 - 1743218 - g 71 -5.4 -4.43877 | overlap 1743221 1743223 GAAGTCGGAAATAAA CTAC ACC GTAG AGAATCTCGGAGAGG AF1942m 1741798 - 1743947 + | hypothetical protein AF1944 1743944 - 1744981 + | hypothetical protein AF1945 1744968 - 1745678 + | hypothetical protein AF1946 1745815 - 1749081 + | cysteine proteinase, putative AF1947 1749078 - 1749716 + | hypothetical protein TERM 770 1750591 - 1750576 - g 86 -6.1 -5.10933 | GGAGGCAAAAGAAAA GGGCT ACACAG AGCCC TGCGGAGATTATGAG AF1948 1749869 - 1752319 + | hypothetical protein AF1949 1752313 - 1752810 + | hypothetical protein hisIE 1752865 - 1753191 + | phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphohydrolase (hisIE) AF1951 1753124 - 1754944 + | ATPase AF1952 1754998 - 1755714 + | hypothetical protein AF1953 1755796 - 1756539 + | hypothetical protein gatA-1 1757914 - 1756553 - | Glu-tRNA amidotransferase, subunit A (gatA-1) pheS 1757983 - 1759407 + | phenylalanyl-tRNA synthetase subunit alpha AF1956 1759480 - 1759749 + | chromatin protein hgdB 1759796 - 1760785 + | 2-hydroxyglutaryl-CoA dehydratase, subunit beta (hgdB) hgdA 1760782 - 1761957 + | 2-hydroxyglutaryl-CoA dehydratase, subunit alpha (hgdA) TERM 771 1762074 - 1762052 - g 70 -10.6 -2.95906 | overlap 1762051 TACAAGGTCATAAAG GTCTCCCCCA ATC TGGAGGAAAC GGCAGAGAGGGTTTT hgdC 1761962 - 1762717 + | (R)-hydroxyglutaryl-CoA dehydratase activator (hgdC) AF1960 1764075 - 1762714 - | DNA helicase, putative pflX 1765316 - 1764318 - | pyruvate formate-lyase activating enzyme (pflX) TERM 772 1765670 - 1765656 - g 73 -11.4 -2.91264 | opp_overlap 1765655 1765663 TCTCTGATGTATATA GCCGCT TTG AGCGGC CTCTCATCGTCTATT AF1962 1765433 - 1765876 + | hypothetical protein acn 1766051 - 1767352 + | aconitase (acn) AF1964 1767841 - 1767353 - | hypothetical protein AF1965 1767726 - 1768136 + | hypothetical protein AF1966 1768162 - 1768737 + | hypothetical protein TERM 773 1769316 - 1769290 - gT 73 -5.1 -4.60258 | overlap 1769283 TCACGAAAGAAGAAA GTACCACAGAG CTTTT CTCGGTAGCAC CTACTTCGACCTGCT AF1968 1770419 - 1769655 - | ROK family transcriptional regulator AF1967 1768724 - 1769728 + | hypothetical protein AF1969 1770462 - 1771070 + | hypothetical protein AF1970 1772008 - 1771067 - | TPR domain-containing protein hsp20-2 1772537 - 1772115 - | small heat shock protein (hsp20-2) TERM 774 1773233 - 1773221 - gH 74 -4.8 -4.78107 | GATGATTATGAAAAA GCTC GGGGG GAGC ATCACGGAGAGCAAG AF1972 1772583 - 1773632 + | hypothetical protein TERM 775 1773732 - 1773743 + GT 76 -4.4 -5.0133 | GATTCCGATTATTGA CTCT GCCG AGAG TTTTTTCAAGGGATA TERM 776 1773772 - 1773784 + GT 87 -7.7 -5.00616 | opp_overlap 1773780 TACACTATAGTTGAG CAGGA CAA TCCTG TTTTTTCGAGAAAAA TERM 777 1774319 - 1774354 + GT 95 -14 -3.40403 | overlap 1774309 CGATTCTGGGCGATT CCCAGTTCGTTACGCC TGAG GGTGTAGCGGACAGGG TTGTCATGGGGCACA AF1973 1773583 - 1774593 + | hypothetical protein hemB 1775555 - 1774587 - | delta-aminolevulinic acid dehydratase hemA 1776783 - 1775470 - | glutamyl-tRNA reductase AF1976 1778079 - 1776883 - | proteasome-activating nucleotidase AF1977 1778173 - 1778652 + | hypothetical protein TERM 778 1778725 - 1778702 - gf 79 -10.2 -3.52102 | ACTTCATCTACATAA CCGCCCCTTC TTTG GAGGAGGCGG AAAGAATAGCGAAGA TERM 779 1778772 - 1778758 - gf 78 -2 -5.24129 | overlap 1778759 1778760 CTCCTTGAGAAAAAA CTCGCA GCC TGCGTA AACATCTTTCCCATT cutA 1778680 - 1778988 + | periplasmic divalent cation tolerance protein (cutA) AF1979 1778922 - 1779680 + | hypothetical protein helC 1780439 - 1779783 - | heme exporter protein C (helC) AF1981 1781270 - 1780476 - | ABC transporter, permease protein AF1982 1782015 - 1781254 - | ABC transporter, ATP-binding protein AF1983 1782980 - 1782012 - | ABC transporter, periplasmic binding protein troR 1783366 - 1782947 - | iron-dependent repressor (troR) ilvC 1783412 - 1784410 + | ketol-acid reductoisomerase AF1986 1785018 - 1784407 - | hypothetical protein AF1987 1785675 - 1785025 - | hypothetical protein TERM 780 1786192 - 1786156 - R 80 -10.2 -3.68302 | gap 2, overlap 1786147 TTAATAGGCGAACAA CCTCACCCTTGGCCGCTG CTG CA-CGGCCA-GGATGGGG AGAGCCGACATCGAG TERM 781 1786238 - 1786266 + r 71 -9.5 -2.83176 | opp_overlap 1786215, overlap 1786236 1786241 1786254 GTCGATATGTACTCT CGCCGGGGACAAC TCT GTTATCCCTGGGG TAGCTTTTCTGTCGT TERM 782 1786254 - 1786270 + r 71 -5.1 -4.57353 | overlap 1786238 1786236 GCCGGGGACAACTCT GTTATCC CTG GGGTAGC TTTTCTGTCGTCACC TERM 783 1788043 - 1788056 + r 70 -8.1 -3.71527 | GGGCTGTCGGTTTCC CTCCG GCTT CGGAG TTTCACTCCTTAGCC TERM 784 1788230 - 1788242 + r 71 -6.2 -4.2354 | CAGGCTCTTTTCACT CCCC TTCTC GGGG TTCTTTTCAGCTTTC TERM 785 1788477 - 1788498 + r 77 -10.1 -3.28765 | opp_overlap 1788475 1788473, overlap 1788492 CTACAACACCACATC CATCCGGAG TTAC CCCCGGATG TTCGGTTTGGGCTGT TERM 786 1789978 - 1789968 - R 79 -6.8 -4.64676 | overlap 1789969 1789970 TTAGGCCCAATAAAA GTGG CCG CCAC TCGGGCCGCCGGTAT TERM 787 1790386 - 1790417 + r 91 -13 -3.06915 | opp_overlap 1790408 ACTGAGCCGTCCGCC GGTGCTTGCATCCC CGAA GGGATACAAGCCCC TTGACTCGCATGGCT TERM 788 1790566 - 1790546 - R 79 -11.2 -2.65271 | overlap 1790548 GACAAGCCCACATCA GACCGCAT TTTGC ATGCGGTC CTCCCACAATATACC AF1988 1791302 - 1790775 - | hypothetical protein slyD 1791350 - 1792111 + | peptidyl-prolyl cis-trans isomerase (slyD) AF1990 1792318 - 1794426 + | hypothetical protein AF1991 1794419 - 1794775 + | hypothetical protein AF1992 1794786 - 1795727 + | calcium-binding protein, putative AF1993 1795732 - 1796112 + | hypothetical protein AF1994 1796109 - 1796819 + | hypothetical protein TERM 789 1796807 - 1796849 + F 76 -2.1 -5.52384 | gap 1, overlap 1796799 1796808 CTACGAGGTTGCAGC CTTTGAGGGCTGAGCGTTTG CAAA CAAAAGTT-GGCCCTTAAAA TTTTTTTAGTAAAAC AF1995 1796894 - 1798369 + | sodium- and chloride-dependent transporter vapC-1 1798827 - 1798573 - | virulence associated protein C (vapC-1) AF1997 1799014 - 1798793 - | hypothetical protein AF1998 1800158 - 1799094 - | iron-sulfur binding reductase AF1999 1800673 - 1800257 - | hypothetical protein ahcY-2 1801878 - 1800661 - | S-adenosyl-L-homocysteine hydrolase AF2001 1802418 - 1801882 - | hypothetical protein hisC-1 1803371 - 1802412 - | histidinol-phosphate aminotransferase (hisC-1) AF2003 1803609 - 1803460 - | hypothetical protein AF2004 1804717 - 1803614 - | L-tyrosine decarboxylase TERM 790 1804999 - 1804970 - gH 77 -8.5 -3.87815 | opp_overlap 1804969 1804968, overlap 1804996 TGGGATTTGCACAAA GGCGTGGGCTCCA TCGC TGGAATCCATGCC GCTTTAAGGCACTTC mobA 1804766 - 1805368 + | molybdopterin-guanine dinucleotide biosynthesis protein A (mobA) moaA 1805338 - 1806228 + | molybdenum cofactor biosynthesis protein A ribG 1806232 - 1806891 + | riboflavin-specific deaminase (ribG) AF2008 1807201 - 1806881 - | hypothetical protein nirJ-2 1807303 - 1808709 + | heme biosynthesis protein (nirJ-2) TERM 791 1808721 - 1808731 + F 70 -2.6 -5.09204 | opp_overlap 1808721 TTGAGGCCTAAATAG TAAA ATT TTTA TTTTTGTTAGCATGT AF2010 1808756 - 1809454 + | hypothetical protein AF2011 1809630 - 1809890 + | hypothetical protein AF2012 1809856 - 1810269 + | hypothetical protein TERM 792 1810450 - 1810462 + F 77 -7.7 -4.25104 | opp_overlap 1810439 ATGATTAAAGGCAGT GGCTT TTA AAGCC TTTTGCTGCAAACGC ftsA-3 1810545 - 1811867 + | coenzyme F390 synthetase (ftsA-3) TERM 793 1811870 - 1811886 + F 70 -5.9 -4.46112 | opp_overlap 1811870, overlap 1811872 1811876 AGAAGAGCTCTAAAG TGTGCAT TTT ATGCATA TTTATTTGCATAAAA TERM 794 1811876 - 1811901 + F 82 -6.3 -4.92239 | opp_overlap 1811870, overlap 1811872 1811870 1811897 GCTCTAAAGTGTGCA TTTTATGCATA TTTA TTTGCATAAAA TTTTTAGCTTTTTAA AF2014 1811931 - 1813136 + | sugar transporter, putative TERM 795 1813767 - 1813755 - g 82 -7.7 -4.62471 | TTGAATGCCGAAAAA CCACT CAT AGTGG CTGGAAGCGGGGTCT ilvB-3 1813146 - 1814777 + | acetolactate synthase, large subunit (ilvB-3) galE-2 1814779 - 1815702 + | UDP-glucose 4-epimerase (galE-2) TERM 796 1815808 - 1815798 - g 70 -3.2 -4.75174 | overlap 1815799 GATGTAAGCGAAAAA GCTC TCG AAGC TGCAAGAGAGCAGAT TERM 797 1816122 - 1816136 + G 79 -7.8 -4.58283 | GACAGCAAAACAGTC GCCTTC GTG GAGGGC TTTTTGAGGGAGTTG hbd-9 1815699 - 1816544 + | 3-hydroxyacyl-CoA dehydrogenase (hbd-9) AF2018 1816541 - 1817275 + | hypothetical protein AF2019 1817292 - 1818407 + | alcohol dehydrogenase, iron-containing AF2020 1818947 - 1818372 - | hypothetical protein mreB 1818927 - 1820018 + | rod shape-determining protein (mreB) AF2022 1820015 - 1820542 + | hypothetical protein TERM 798 1820917 - 1820952 + GF 81 -6.8 -4.67353 | GGGCAAGCTCACCCG GAACTGCATCCCTCTC AAAA GAGGTGGATGGCGTTC TTTTTAACTCCGTCA TERM 799 1821343 - 1821319 - gf 91 -12.9 -3.02043 | opp_overlap 1821316 AATCGTTGCTCAATA TCTGCGACCAC GTG GTGCTCGCAGA CCCCTTCTTTCGGGA AF2023 1820502 - 1821398 + | hypothetical protein hisC-2 1821395 - 1822423 + | histidinol-phosphate aminotransferase (hisC-2) AF2025 1822965 - 1822420 - | hypothetical protein AF2026 1824592 - 1822958 - | hypothetical protein AF2027 1825119 - 1824436 - | hypothetical protein AF2028 1826990 - 1825167 - | hypothetical protein TERM 800 1827222 - 1827210 - g 100 -7.7 -5.27477 | AGTCCAAGGAAAAAA TCGAG CTG CTCGA AGACGAGGGGTTCGA AF2029 1827086 - 1828507 + | hypothetical protein iorB 1828539 - 1829144 + | indolepyruvate ferredoxin oxidoreductase, subunit beta (iorB) AF2031 1829976 - 1829116 - | hypothetical protein TERM 801 1829824 - 1829844 + g 71 -5.3 -4.45738 | overlap 1829826 CTTTACCTCTTTTGT GGCAGCGAG CAT CTCCCTGAC TTTCTTGTTGAGCTC TERM 802 1830413 - 1830426 + G 70 -2.3 -4.98255 | GGGCGAGAGTGTGGA GCCCT ACGA AGAGC TTTTTGTCCTTCCAG TERM 803 1832075 - 1832091 + G 85 -12.3 -3.73072 | AAGAATTGTGGACAT CGTCGAG AAA CTCGACG TTTCCTGGGCAAATT AF2032 1830162 - 1832180 + | signal-transducing histidine kinase, putative alkK-5 1833790 - 1832177 - | acyl-CoA synthetase pepQ 1833919 - 1835010 + | X-pro aminopeptidase (pepQ) serS 1836365 - 1835004 - | seryl-tRNA synthetase coxD 1837234 - 1836389 - | cytochrome C oxidase folding protein (coxD) eif2BD 1838238 - 1837297 - | translation initiation factor IF-2B subunit delta TERM 804 1839401 - 1839386 - g 76 -7.6 -4.31943 | TTGAGATAAAAAAGA GCATTC ACGA GAATGC AGACCTTTACTACGA TERM 805 1839528 - 1839516 - g 73 -9.1 -3.8062 | GAAGCTGGAGAAGAA GCTCG TCA CGAGC ATCAAAGTGAGAAGG AF2038 1838293 - 1840176 + | hypothetical protein TERM 806 1840563 - 1840526 - g 87 -9.9 -4.4078 | GCCCTTGAACCAAAA CCGGGAGAGGTTG TTGTTGACCTCG CAGCCTCTCCCGG CGGGAAAACTACCTT AF2039 1840163 - 1841137 + | proliferating-cell nucleolar antigen P120, putative AF2040 1842290 - 1841100 - | hypothetical protein TERM 807 1841837 - 1841813 - G 70 -4.2 -4.70879 | overlap 1841821 CGGAAACGGCAAAAA CGAGAAAGGC GTAGA GCCTTTTGCG CCACGCGGAGTAGCT TERM 808 1842622 - 1842653 + H 73 -8.8 -3.73982 | gap 1, opp_overlap 1842618 1842621 AGAAAAGATAACATT GTCCAATGC-GGCAA CGA TTGCCGGTAGTGGAC TTATATTGATGTCGG AF2041 1842662 - 1843150 + | hypothetical protein pyrH 1843239 - 1843898 + | uridylate kinase (pyrH) AF2043 1844118 - 1843933 - | hypothetical protein pssA 1844888 - 1844223 - | CDP-diacylglycerol--serine O-phosphatidyltransferase (pssA) TERM 809 1844465 - 1844452 - G 73 -5.9 -4.5265 | overlap 1844444 AAGGAGAGCAGAAAA GCCGC AACC GCAGC CCAGCCGTATCCAGC psd2 1845453 - 1844866 - | phosphatidylserine decarboxylase AF2046 1846196 - 1845450 - | cytochrome oxidase, subunit I, putative AF2047 1847665 - 1846223 - | thymidylate synthase, putative TERM 810 1848469 - 1848443 - gH 79 -10.2 -3.58037 | opp_overlap 1848458, overlap 1848458 CACGAAGGTTGTAAA TGCCAGACCAAA CAT TCTGACCTGGCA GATATCCTTCAACAA AF2048 1847580 - 1848503 + | hypothetical protein AF2049 1848493 - 1849629 + | hypothetical protein AF2050 1849637 - 1850017 + | hypothetical protein ftsJ 1850014 - 1850589 + | cell division protein (ftsJ) vorB 1851412 - 1850576 - | 2-ketoisovalerate ferredoxin oxidoreductase, subunit beta (vorB) vorA 1852509 - 1851409 - | 2-ketoisovalerate ferredoxin oxidoreductase, subunit alpha (vorA) vorD 1852718 - 1852470 - | 2-ketoisovalerate ferredoxin oxidoreductase, subunit delta (vorD) vorG 1853227 - 1852709 - | 2-ketoisovalerate ferredoxin oxidoreductase, subunit gamma (vorG) AF2056 1853601 - 1853260 - | hypothetical protein TERM 811 1854602 - 1854586 - g 79 -9.4 -4.13767 | opp_overlap 1854584 TCGCTGACCTGAAAA CGCAGC TTGAG GCTGCG AGATTGCTGATATAC acd-10 1853637 - 1854866 + | acyl-CoA dehydrogenase (acd-10) AF2058 1854898 - 1855932 + | hypothetical protein AF2059 1856481 - 1855891 - | hypothetical protein rfc 1857437 - 1856478 - | replication factor C small subunit AF2061 1858072 - 1857452 - | hypothetical protein TERM 812 1857806 - 1857790 - G 77 -8.7 -4.10007 | overlap 1857791 AGAACCTCTTCAAAA CCTCCTC ACT GAGGAGA GGGAGGTCGGACATT dpa 1859091 - 1858069 - | signal recognition particle receptor (dpa) AF2063 1859510 - 1859097 - | prefoldin subunit alpha rplX 1859680 - 1859507 - | 50S ribosomal protein LX AF2065 1860337 - 1859690 - | translation initiation factor IF-6 rpl31E 1860604 - 1860338 - | 50S ribosomal protein L31E (rpl31E) rpl39e 1860767 - 1860615 - | 50S ribosomal protein L39e AF2068 1861107 - 1860772 - | hypothetical protein rps19E 1861553 - 1861110 - | 30S ribosomal protein S19e AF2070 1861785 - 1861558 - | hypothetical protein argC 1862847 - 1861849 - | N-acetyl-gamma-glutamyl-phosphate reductase TERM 813 1863037 - 1863020 - g 70 -2.5 -4.91511 | overlap 1863021 AGGTGAGGATAAAAA GCCCCGC CAAG GAGGGGA AAGCGAACAGGGAGC AF2072 1862908 - 1863144 + | hypothetical protein ftr-1 1864109 - 1863204 - | tetrahydromethanopterin formyltransferase thiE 1864791 - 1864159 - | thiamine phosphate pyrophosphorylase (thiE) thiM 1865597 - 1864791 - | hydroxyethylthiazole kinase AF2076 1866570 - 1865659 - | hypothetical protein AF2077 1867389 - 1866577 - | hypothetical protein TERM 814 1866772 - 1866790 + g 70 -11.6 -2.52676 | CTTGGTTGTACAGCT CCTCCCCG CTC CGGGGTGG TGGGTTGCGAAACTG AF2078 1868417 - 1867386 - | hypothetical protein TERM 815 1868034 - 1868047 + g 72 -3.8 -4.89393 | TCTCTGAATGTAGTT TCCC ACCTCA GGGA TTTTTATGGGATTTC AF2079 1868853 - 1868395 - | hypothetical protein TERM 816 1868672 - 1868686 + g 74 -7.8 -4.22883 | overlap 1868669 AATCCCTTGCCGTAT CCCGGA TAA TTCGGG TTGTTTTCGGTGATG AF2080 1869420 - 1868887 - | hypothetical protein AF2081 1870010 - 1869420 - | hypothetical protein TERM 817 1869989 - 1870000 + g 86 -5.8 -5.14894 | opp_overlap 1869989 CCATTGCTCCCAATA TGCC CAAA GGCA TTTTTCTCATTTTTT AF2082 1870268 - 1870122 - | hypothetical protein AF2083 1870610 - 1870359 - | hypothetical protein TERM 818 1870774 - 1870756 - R 76 -11 -2.54841 | overlap 1870755 1870753 AATCTGAATCAAGAC TCCTGCCG CAA CGGCAGAA CCGATAACTCCAGCT oadB 1871796 - 1870732 - | oxaloacetate decarboxylase, sodium ion pump subunit (oadB) TERM 819 1871224 - 1871238 + g 73 -2.8 -5.02476 | TATGGTTGCAATAGG GAAAAG AAT CTTCTC TTTTTTAGACACTAT AF2085 1872224 - 1871796 - | oxaloacetate decarboxylase, biotin carboxyl carrier subunit, putative AF2086 1872502 - 1872221 - | protease inhibitor, putative fib 1873176 - 1872544 - | fibrillarin AF2088 1873958 - 1873173 - | hypothetical protein AF2089 1874880 - 1873939 - | hypothetical protein TERM 820 1874417 - 1874437 + g 70 -2.6 -4.93877 | TTTGCCCTGCTGGCT GAAGAG GGCAGGAAG CTCTTC TTTTCTTTGGTGGAA TERM 821 1878553 - 1878563 + Gr 70 -3.2 -4.78572 | opp_overlap 1878541, overlap 1878541 1878540 GATGCAGATGGAGAC TCCT TCT GGGA TTTTGTTGATTCGAA AF2091 1880928 - 1880770 - | ISA1214-5 transposase AF2090-N 1874992 - 1880838 + | hypothetical protein AF2092 1880980 - 1881948 + | ISA1214-5 transposase AF2090-C 1882177 - 1883886 + | hypothetical protein AF2093 1883927 - 1884664 + | hypothetical protein AF2094 1884934 - 1885206 + | hypothetical protein AF2095 1885206 - 1885553 + | peptidyl-tRNA hydrolase radB 1886219 - 1885554 - | DNA repair and recombination protein RadB AF2097 1887375 - 1886188 - | hypothetical protein cdc48-2 1887435 - 1889870 + | cell division protein CDC48 TERM 822 1889861 - 1889849 - T 71 -6.2 -4.24342 | GGTTGCAGCAACAAA GCCC TTCAT GGGC TACGGTTAAGCAATT clcB 1890994 - 1889867 - | muconate cycloisomerase II (clcB) TERM 823 1890366 - 1890379 + g 74 -2.4 -5.1861 | opp_overlap 1890350, overlap 1890350 TTTTCAAGCTCCTTG GCAA CCTTCA TTGC TTTTTTCCTGCTCCA TERM 824 1891689 - 1891676 - g 70 -9.5 -3.21354 | CTACAGACCGATGAA GCCCC CTGT GGGGC ATCCTGAGCTGGTGG ilvB-4 1891101 - 1892828 + | acetolactate synthase, large subunit (ilvB-4) AF2101 1892825 - 1894033 + | alcohol dehydrogenase, zinc-dependent AF2102 1894676 - 1894023 - | hypothetical protein TERM 825 1894321 - 1894311 - G 76 -6.8 -4.52589 | TGCGTGGATATAAAA CAGC ACA GCTG AGATTATGAAGCATA AF2103 1895155 - 1894712 - | hypothetical protein TERM 826 1894757 - 1894745 - G 83 -9.1 -4.34402 | TTGTTCATATGAAAA GGGAG ATG CTCCC CAGACCAGTTGCAAG AF2104 1896304 - 1895165 - | hypothetical protein AF2105 1896570 - 1896301 - | hypothetical protein AF2106 1896610 - 1897311 + | hypothetical protein ribB 1897308 - 1898024 + | 3,4-dihydroxy-2-butanone 4-phosphate synthase AF2108 1898082 - 1898924 + | hypothetical protein AF2109 1900731 - 1898905 - | signal-transducing histidine kinase AF2110 1900730 - 1901455 + | hypothetical protein AF2111 1902082 - 1901441 - | hypothetical protein metE 1903020 - 1902085 - | 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase AF2113 1903321 - 1903022 - | hypothetical protein AF2114 1904190 - 1903366 - | hypothetical protein AF2115 1905149 - 1904187 - | hypothetical protein gatB 1906624 - 1905146 - | aspartyl/glutamyl-tRNA amidotransferase subunit B TERM 827 1906053 - 1906070 + gH 70 -9.1 -3.14683 | opp_overlap 1906052 TTGTTCAGGAAAAGC CTCGCCT CCTT GGGCGAG TTCATCACCGGCTCT alkA 1906601 - 1907488 + | 3-methyladenine DNA glycosylase (alkA) TERM 828 1907603 - 1907624 + G 70 -8.1 -3.72695 | opp_overlap 1907602, overlap 1907607 CGAGAATCGAAGCAG GAAAGTTTG ACCC CAAGCTTTC TTTGGTCAAGAAAAT guaB-2 1907488 - 1908039 + | inosine monophosphate dehydrogenase (guaB-2) AF2119 1910576 - 1908351 - | hypothetical protein AF2120 1911147 - 1910695 - | hypothetical protein AF2121 1911624 - 1911154 - | hypothetical protein AF2122 1912062 - 1911634 - | hypothetical protein AF2123 1912498 - 1912067 - | hypothetical protein AF2124 1913036 - 1912608 - | hypothetical protein TERM 829 1912804 - 1912794 - G 71 -5.4 -4.57341 | AAGCGGTGTGAAAAA GGAA ATT TTCC TGAAGAAGACTCTGC AF2125 1914010 - 1913033 - | hypothetical protein AF2126 1914966 - 1914070 - | hypothetical protein AF2127 1916105 - 1915131 - | LysR family transcriptional regulator ribH 1916210 - 1916641 + | riboflavin synthase subunit beta aspB-2 1916622 - 1917761 + | aspartate aminotransferase AF2130 1918325 - 1918026 - | hypothetical protein AF2131 1919688 - 1918699 - | hypothetical protein AF2132 1920694 - 1919960 - | hypothetical protein AF2133 1921612 - 1920752 - | hypothetical protein AF2134 1921687 - 1921977 + | hypothetical protein TERM 830 1922169 - 1922210 + G 73 -10.9 -3.29461 | overlap 1922172 TCGCCGAAAGGTTGG GAATTCCTGCCGATGCGAT AATG GTCGAAAAGGCAGGAATTC TTGTCCCCGACGTTC AF2135 1922033 - 1922416 + | hypothetical protein AF2136 1922439 - 1922978 + | ArsR family transcriptional regulator AF2137 1924014 - 1923163 - | hypothetical protein serB 1925045 - 1924011 - | phosphoserine phosphatase (serB) AF2139 1925789 - 1925241 - | ISA1083-3 transposase AF2140 1926267 - 1925782 - | ISA1083-3 transposase AF2141 1927162 - 1926476 - | hypothetical protein fdx-8 1927209 - 1927039 - | ferredoxin (fdx-8) AF2143 1927555 - 1927166 - | hypothetical protein trx-4 1927880 - 1927563 - | thioredoxin (trx-4) grx-2 1928142 - 1927867 - | glutaredoxin (grx-2) TERM 831 1928218 - 1928184 - R 75 -8 -4.128 | overlap 1928185 ACGTCCATATATAAA TGCTTTTACCGGTTTT GAC AAAATCGGTAAAAACT ATGCGTAGATTGTTA TERM 832 1928217 - 1928185 - R 81 -11.5 -3.07198 | overlap 1928184 CGTCCATATATAAAT GCTTTTACCGGTTTT GAC AAAATCGGTAAAAAC TATGCGTAGATTGTT AF2146 1929284 - 1928217 - | GTP-binding protein AF2147 1929916 - 1929329 - | hypothetical protein AF2148 1930013 - 1930885 + | hypothetical protein AF2149 1931507 - 1930872 - | hypothetical protein TERM 833 1931047 - 1931059 + g 73 -6.3 -4.57837 | CTGTCAATCTGCTCC TCAAG TAT CTTGA TTTTTAGCAGAATGT moaC 1931974 - 1931504 - | putative molybdenum cofactor biosynthesis protein C TERM 834 1932521 - 1932511 - g 76 -5.4 -4.86133 | overlap 1932504 TAGACACATGAAAAA CGTT TTC AACG CAAAAATAATCGAAT entB 1932026 - 1932553 + | isochorismatase (entB) rps8E 1933079 - 1932702 - | 30S ribosomal protein S8e AF2153 1933169 - 1933795 + | hypothetical protein AF2154 1934291 - 1933800 - | hypothetical protein AF2155 1935010 - 1934306 - | hypothetical protein TERM 835 1934731 - 1934754 + g 71 -7.4 -4.07568 | opp_overlap 1934731, overlap 1934741 GAGACTCCATGAAAC TTTTCGTGCC CTTC GGCCCGAAGA TTTTCAGCACACCCC cca 1936320 - 1935007 - | tRNA nucleotidyltransferase (CCA) AF2157 1936847 - 1936317 - | hypothetical protein AF2158 1937068 - 1936847 - | hypothetical protein AF2159 1937952 - 1937047 - | hypothetical protein AF2160 1938442 - 1937957 - | hypothetical protein TERM 836 1938349 - 1938325 - G 78 -3.6 -5.07567 | gap 1, opp_overlap 1938325 TCACAGCGGAAAAAA CCTCAATGGCA GAAT TGGCAT-GAGG TATTAGAACCGCAAG AF2161 1938648 - 1938469 - | hypothetical protein AF2162 1939268 - 1938735 - | hypothetical protein AF2163 1939837 - 1939259 - | hypothetical protein AF2164 1940390 - 1939992 - | hypothetical protein AF2165 1941140 - 1940397 - | hypothetical protein AF2166 1941517 - 1941053 - | hypothetical protein AF2167 1942463 - 1941522 - | hypothetical protein TERM 837 1942009 - 1942023 + g 72 -8.6 -3.82503 | overlap 1942008 CTGTTGTCCACGTTG CTATCC CAC GGATAG TCTTTTGGTCTGTTT AF2168 1943074 - 1942700 - | hypothetical protein AF2169 1943463 - 1943053 - | hypothetical protein AF2170 1944463 - 1943489 - | hypothetical protein AF2171 1945215 - 1944580 - | hypothetical protein AF2172 1946145 - 1945222 - | hypothetical protein TERM 838 1947328 - 1947346 + G 79 -11 -3.56568 | opp_overlap 1947327 1947328, overlap 1947315 1947331 GGAGATTCTGAGAAT CCTGCTCT GGG AGGGCAGG TTTCAGGGCTGATTA ncd2 1946605 - 1947429 + | 2-nitropropane dioxygenase (ncd2) AF2174 1947679 - 1947578 - | hypothetical protein AF2175 1948791 - 1947970 - | hypothetical protein ubiA 1949688 - 1948813 - | 4-hydroxybenzoate octaprenyltransferase (ubiA) TERM 839 1948990 - 1948980 - G 80 -3.2 -5.24551 | TTAAAGGAAGAAAAA GCTC TGC AAGC TTAGCGTTATGGATT lhr-2 1952262 - 1949675 - | ATP-dependent helicase TERM 840 1952719 - 1952739 + Gr 70 -8.3 -3.37612 | GTGATTATTAGGGTT GAGCTTGTT GAT AGCGAGCTC TTCGTTGGGGTTGAC TERM 841 1953069 - 1953036 - gR 72 -9 -3.4285 | gap 1, overlap 1953045 TTACGGAATGGAGAA GTTTC-GAAAGCACC TTGTT GGTGCTATCAGAAAC GCCGTAAATGCGGGA AF2178 1952209 - 1953387 + | hypothetical protein moaE 1954096 - 1953377 - | molybdopterin converting factor, subunit 2 (moaE) AF2180 1954614 - 1954087 - | hypothetical protein TERM 842 1954782 - 1954796 + G 74 -10 -3.6215 | AGGGAGATATACCTT TCCCTG AAA CAGGGA TTTGACCTCGATTGG AF2181 1954665 - 1955303 + | hypothetical protein AF2182 1955578 - 1955300 - | hypothetical protein AF2183 1956280 - 1955627 - | hypothetical protein TERM 843 1956070 - 1956086 + g 80 -2.9 -5.28176 | opp_overlap 1956056, overlap 1956056 1956073 ACTTCGCTCCCAGAT CGAGGTT TGA AACCGTG TTTTTTATGAATGCA AF2184 1956934 - 1956308 - | hypothetical protein sucD-2 1957794 - 1956931 - | succinyl-CoA synthetase, alpha subunit (sucD-2) sucC-2 1958940 - 1957798 - | succinyl-CoA synthetase, beta subunit (sucC-2) AF2187 1959302 - 1959006 - | hypothetical protein TERM 844 1959331 - 1959351 + H 70 -8.4 -3.27674 | overlap 1959340 TCGATGGCTATTGCT GCTATATC TGGCT GATATAGC CTTTTCTCGTCGAAT TERM 845 1959340 - 1959352 + H 70 -5.5 -4.47328 | overlap 1959331 ATTGCTGCTATATCT GGCTG ATA TAGCC TTTTCTCGTCGAATT TERM 846 1959386 - 1959401 + H 72 -9 -3.42613 | overlap 1959384 TTAAGTTGTAGAGGG GGCAGA AGGT TCTGCC TATTGATTTGTCTTT TERM 847 1959665 - 1959686 + G 87 -7.2 -4.98531 | TATTTGCAGCTGCAT GGGTGGGG TTGAAT CCCTGCCC TTTTTGATTTCCAAG AF2188 1959477 - 1959752 + | hypothetical protein AF2189 1959972 - 1960190 + | hypothetical protein AF2190 1960177 - 1960587 + | hypothetical protein AF2191 1961003 - 1961380 + | hypothetical protein TERM 848 1961724 - 1961714 - g 79 -6.8 -4.64952 | opp_overlap 1961714 AAGGACAGAAAGAAA GCCA AGG TGGC TGCTGTAATGACTCT TERM 849 1962474 - 1962458 - g 100 -4.3 -6.09196 | CTTAAAATAAAAAAA GTCTCGA TGC CCGCGAC GCTGCTTCACCTGGG nrfE 1961381 - 1962892 + | cytochrome C-type biogenesis protein (nrfE) AF2193 1962902 - 1963087 + | hypothetical protein AF2194 1963626 - 1963084 - | rRNA (adenine-N6)-methyltransferase, putative dys1-1 1964574 - 1963669 - | deoxyhypusine synthase (dys1-1) TERM 850 1965017 - 1964997 - g 74 -2.4 -5.15634 | opp_overlap 1965000, overlap 1964999 GATTCGAGCAAAAAA GTCGTTGC TGCTG GCTACGGC GACTATTACAGAATT AF2196 1964646 - 1965353 + | hypothetical protein AF2197 1966518 - 1965331 - | potassium channel, putative TERM 851 1965511 - 1965521 + g 73 -5.4 -4.74103 | overlap 1965506 GCTTTCGACCCTTGC CTCT CCA AGAG TTTTTCCGTTGAGCG AF2198 1966912 - 1966547 - | hypothetical protein leuC 1968159 - 1966909 - | 3-isopropylmalate dehydratase large subunit TERM 852 1967460 - 1967474 + g 70 -10 -3.28714 | overlap 1967458 CCCTCCCAAGCTCGG CGAGGA ATT TCCTCG TGTTCTCATCGCTCT TERM 853 1967883 - 1967902 + g 70 -2 -5.02074 | overlap 1967875 TCCCCTCTCCGGGCG GGTTGAAG TCCG CCCCAACC TTTTTTGCAAACTCG TERM 854 1968294 - 1968281 - g 80 -3.1 -5.24129 | overlap 1968292 CTGCTGGACAAAAAA GTCTC TAAA AAGAC GGATGCCGCCGTGGT TERM 855 1968304 - 1968292 - g 79 -6.9 -4.61527 | opp_overlap 1968294, overlap 1968281 AAAAGTCTCTAAAAA GACGG ATG CCGCC GTGGTGGTTCCGGTT AF2200 1968242 - 1968781 + | mutator protein MutT, putative AF2201 1968839 - 1969393 + | hypothetical protein AF2202 1970084 - 1969398 - | tryptophan-specific permease, putative AF2203 1970431 - 1970072 - | hypothetical protein TERM 856 1970468 - 1970435 - H 83 -9.7 -3.85698 | opp_overlap 1970437 1970440, overlap 1970437 CCTGTTTCCCATAAA CACCACTAACTACGA TACA TCGTAGTAAGTAGTA TATGTAACTTTCGTA TERM 857 1970466 - 1970437 - H 79 -10.1 -3.51934 | opp_overlap 1970437 1970440, overlap 1970435 TGTTTCCCATAAACA CCACTAACTACGA TACA TCGTAGTAAGTAG TATATGTAACTTTCG AF2204 1970635 - 1971873 + | arylsulfatase regulatory protein, putative AF2205 1971911 - 1973437 + | hypothetical protein AF2206 1973481 - 1973927 + | phosphopantetheine adenylyltransferase TERM 858 1973960 - 1973950 - f 79 -6.8 -4.48987 | opp_overlap 1973949 TTTCCAGAAGGAAAA GCTC GTC GAGC GTGTTAAGGAAAAGG TERM 859 1974105 - 1974125 + F 85 -6.9 -5.10665 | CAAGCCTCACTCCGA GCCTTAGAT AGA ATTTGAGGC TTTTGTTTGTTGAGT TERM 860 1974579 - 1974567 - g 75 -9.1 -3.87869 | CCAAGCCCTCAGAAA CTCCC GAT GGGAG GCCGGGATACTACAT ftr-2 1974374 - 1975267 + | tetrahydromethanopterin formyltransferase thiD 1975280 - 1976011 + | hydroxymethylpyrimidine phosphate kinase (thiD) AF2209 1976772 - 1976008 - | GTPase AF2210 1977016 - 1976780 - | hypothetical protein hit 1977564 - 1977082 - | HIT family protein (hit) AF2212 1978298 - 1978483 + | hypothetical protein AF2213 1978694 - 1978912 + | hypothetical protein TERM 861 1979536 - 1979552 + F 86 -10.9 -3.89368 | TGAATCCGTGTTTTC TTCGCTG AAG CAGCGAA TTTAAGTCTTTTTCT AF2214 1979720 - 1980385 + | hypothetical protein mcmA1 1982049 - 1980403 - | methylmalonyl-CoA mutase, subunit alpha, N-terminus (mcmA1) TERM 862 1981245 - 1981231 - G 80 -2.8 -5.33405 | TGCAGCAAAGAAAAA GCTC AGCCTTG GAGC GAAGCTGTCAACATC mmdC 1982481 - 1982059 - | methylmalonyl-CoA decarboxylase, biotin carboxyl carrier subunit (mmdC) mmdA 1984163 - 1982613 - | methylmalonyl-CoA decarboxylase, subunit alpha (mmdA) TERM 863 1982644 - 1982656 + g 83 -9.1 -4.34402 | overlap 1982633 CCGTGCTTCTTGGGT GGGAG CTT CTCCC TTTTGCTCTCCAGAA TERM 864 1983915 - 1983899 - G 76 -5.8 -4.7254 | AGTCCTGAGCAAAAA CGGCAA CAGGT CTGCCG TCAACAGTTCCATAG AF2218 1984567 - 1984172 - | hypothetical protein mcmA2 1985006 - 1984572 - | methylmalonyl-CoA mutase, subunit alpha, C-terminus (mcmA2) AF2220 1985144 - 1985410 + | hypothetical protein TERM 865 1985551 - 1985530 - T 73 -9.4 -3.18383 | opp_overlap 1985520 ATGTGGAGTTAGGAA GCACCCCC TGGTCT GGGGATGC CTCCACGTTCTAACT AF2221 1986633 - 1985611 - | hypothetical protein TERM 866 1986544 - 1986558 + g 76 -5.7 -4.62984 | TAGATAGCGTCTTTT GAACC CTACA GGTTC TTTTATCTCTAATAC AF2222 1987657 - 1986695 - | ISA1214-6 transposase AF2223 1987709 - 1987867 + | ISA1214-6 transposase valS 1990533 - 1987942 - | valyl-tRNA synthetase hpcE-2 1991324 - 1990572 - | 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase (hpcE-2) AF2226 1991389 - 1992447 + | hypothetical protein AF2227 1993402 - 1992434 - | hypothetical protein dsvC 1993704 - 1994051 + | sulfite reductase, desulfoviridin-type subunit gamma (dsvC) cbiA 1995430 - 1994054 - | cobyrinic acid a,c-diamide synthase (cbiA) TERM 867 1995349 - 1995363 + g 76 -6.4 -4.59853 | GCAGCCTCATTAGCC CGATGG AAA TCATCG TTTTTCCAACCTTGC TERM 868 1995576 - 1995557 - g 70 -8.6 -3.69323 | overlap 1995575 TGAGGACGACGTAAA GCTTGCAG AAAT CTACAAGC TGGCGTCCAAGCTCC AF2230 1995489 - 1995755 + | hypothetical protein AF2231 1996729 - 1995743 - | hypothetical protein TERM 869 1996151 - 1996172 + g 95 -5.1 -5.63103 | GAGCTCCCTTGAGAA GGTTGAGGA GTAC TTCTCGGCC TTTTTTTCGTTGAAC TERM 870 1996360 - 1996348 - G 91 -4.7 -5.68023 | overlap 1996349 TTACAATCAAAAAAA CCGGC AGG GCCGT CGAAAAGTACATGGA TERM 871 1996359 - 1996349 - G 74 -8.2 -3.99187 | overlap 1996348 TACAATCAAAAAAAC CGGC AGG GCCG TCGAAAAGTACATGG fur 1997278 - 1996892 - | ferric uptake regulation protein (fur) perA 1997366 - 1999591 + | peroxidase / catalase (perA) AF2234 1999596 - 1999799 + | hypothetical protein AF2235 1999805 - 2000794 + | hypothetical protein AF2236 2001487 - 2000852 - | hypothetical protein AF2237 2001571 - 2002116 + | HAM1 protein thsA 2003759 - 2002122 - | thermosome, subunit alpha (thsA) AF2239 2003970 - 2005040 + | hypothetical protein AF2240 2005188 - 2004997 - | hypothetical protein AF2241 2005615 - 2005220 - | hypothetical protein purB 2006925 - 2005591 - | adenylosuccinate lyase fadA-3 2008231 - 2006987 - | acetyl-CoA acetyltransferase acd-11 2009478 - 2008270 - | acyl-CoA dehydrogenase (acd-11) TERM 872 2010913 - 2010903 - g 73 -5.4 -4.66163 | ATGGCTACGCAAAAA CTCT GGA AGAG CTCGAGGACTTTTTC AF2245m 2009615 - 2011689 + | SKI2-family helicase AF2246 2012775 - 2012242 - | hypothetical protein TERM 873 2012281 - 2012307 + g 84 -4.4 -5.31275 | AGCAACAAGCATTCC TATGAGCGTCTC CCT GAGCCCTTCATA TTTTTTATCCTCGAA TERM 874 2012786 - 2012816 + H 74 -4.2 -5.03314 | opp_overlap 2012796 TCCATGCTACTTTGT TAAATTAAACGTTT ATT AAACTTTTGGTTTA TTTTTTAAACCTAAG TERM 875 2012852 - 2012838 - H 89 -5.8 -5.52096 | AAACCTAAGAAAAAA GTTTAA ATT TTAAAC CAAAAACTTAAATTC TERM 876 2013436 - 2013452 + G 71 -6.5 -4.14392 | GCCGAACTACCTGGG TGTTGGG AAG CCCTACA TTTTCAAGGTTGAGG TERM 877 2013581 - 2013596 + G 79 -5.4 -4.9218 | AAGCAGATAATCCCC CTCCTG CTCG TAGGAG TTTTTATCGTGGGTG AF2247 2012888 - 2013937 + | hypothetical protein AF2248 2013934 - 2014167 + | hypothetical protein TERM 878 2014165 - 2014175 + T 70 -2.6 -5.0538 | opp_overlap 2014165 GAAATCATCAAAAAG TAAA TTT TTTA TTTTTTACGCTACGG AF2249 2014545 - 2014180 - | response regulator pyrC 2015823 - 2014612 - | dihydroorotase AF2251 2016499 - 2015810 - | competence-damage protein, putative argG 2017702 - 2016530 - | argininosuccinate synthase mobB 2017781 - 2018260 + | molybdopterin-guanine dinucleotide biosynthesis protein B (mobB) deaD 2018468 - 2019574 + | DEAD-box ATP dependent DNA helicase TERM 879 2019811 - 2019801 - g 70 -4.6 -4.65895 | CCCTGTATTCAAAAA GCCC TTC GAGC TTGACGAGATGAGGG TERM 880 2020829 - 2020814 - g 70 -3.2 -4.81863 | opp_overlap 2020816, overlap 2020816 AAATGCACAAGAAAA TACTCG GCTT CGAGTT CGATGTGCCCTTATC alaS 2019628 - 2022348 + | alanyl-tRNA synthetase AF2256 2022338 - 2023087 + | hypothetical protein AF2257 2023066 - 2024112 + | hypothetical protein AF2258 2026143 - 2024632 - | multidrug resistance protein AF2259 2027437 - 2026175 - | hypothetical protein TERM 881 2026997 - 2027024 + g 79 -5.5 -4.91712 | opp_overlap 2026993 CTCCGCACCAACGGC GGCAAGGGCTC CGATGA GACCCCTTCCC TTTTTGTGCCTTAAA AF2260 2028005 - 2027415 - | hypothetical protein TERM 882 2027494 - 2027507 + g 78 -2.4 -5.30155 | CTTTCTATGCCTCCC CTTG CCACAT CAAG TTTTTTCCTTAATCC AF2261 2028898 - 2028002 - | tRNA-modifying enzyme TERM 883 2028555 - 2028566 + g 74 -4.4 -4.87626 | TGATTGGGCTCGTAA GCTT CCTC AAGC TTTTTCCTGTTAACA AF2262 2028969 - 2029157 + | hypothetical protein AF2263 2029162 - 2029530 + | hypothetical protein TERM 884 2029734 - 2029746 + F 72 -3.4 -5.08255 | CTCTGATCATTGAGA GGTT CAATA AACC TTTTGTTTTAGCCAT TERM 885 2030083 - 2030061 - g 82 -7 -4.89852 | opp_overlap 2030078, overlap 2030068 TTACATGTACAAAAA CGACAAACTC TTC GAGCTTCTCG ATGCGAGGATTCTGG AF2264 2029975 - 2030439 + | hypothetical protein hisH 2031022 - 2030429 - | imidazoleglycerol-phosphate synthase, subunit H (hisH) AF2266 2031071 - 2031859 + | hypothetical protein AF2267 2032349 - 2031825 - | NAD(P)H-flavin oxidoreductase TERM 886 2032147 - 2032171 + g 76 -5.7 -4.65078 | GCGTTGGGCAGCATC TGACCGAAGGT GAA AGCTTCGCTCA TTTTCTTCAGCATCT TERM 887 2032228 - 2032261 + g 73 -5.9 -4.46757 | gap 1, overlap 2032229 2032255 2032256 CAGGGCTGCTCGTTT CCCGCAGAGGGCGCGA GCA TCGCGGCCT-TGAGGA TTTTCTCAATATCTT AF2268 2032392 - 2033114 + | hypothetical protein TERM 888 2033159 - 2033106 - T 93 -6.7 -5.38497 | gap 1, opp_overlap 2033124 2033125, overlap 2033108 AGGGAAATCAAAAAA GTTCAGTAGGGGAAGAACTCGAACCA GTC CGGTTCGTATTCCTCCACT-CTGCCC AAATCAGAGAGCTTC AF2269 2033872 - 2033108 - | nucleotide-binding protein AF2270 2034360 - 2033953 - | hypothetical protein TERM 889 2034384 - 2034398 + H 72 -4.4 -4.78077 | overlap 2034380 GTTGATGGTGGCATA TAAAAA ATT TTTTTA TTTGTTTTGATTAAA TERM 890 2034688 - 2034678 - g 79 -6.8 -4.6644 | AAGACATTTGAAAAA GCTC GGT GAGC TGGGACTGGTTGAGA AF2271 2034538 - 2035305 + | hypothetical protein AF2272 2035393 - 2036115 + | hypothetical protein TERM 891 2037502 - 2037473 - g 80 -12.3 -3.39844 | gap 1, overlap 2037471 CTGACAGGCTAAACA CGATCTC-CCCAGA AGT TCTGGATGAGATCG ATAGGGCGATTACGC hbd-10 2036173 - 2038179 + | 3-hydroxyacyl-CoA dehydrogenase (hbd-10) AF2274 2038382 - 2038176 - | hypothetical protein acd-12 2039760 - 2038525 - | acyl-CoA dehydrogenase (acd-12) AF2276 2040711 - 2039824 - | hypothetical protein AF2277 2041307 - 2040708 - | DNA polymerase act-4 2041357 - 2042349 + | pyruvate formate-lyase activating enzyme (act-4) AF2279 2042346 - 2042600 + | hypothetical protein AF2280 2042602 - 2042904 + | hypothetical protein TERM 892 2043771 - 2043756 - g 75 -9 -3.92522 | GGTTAACGTGATAAA CAACGC CGGA GCGTTG CCCTACAAGAACTGG aor-4 2042971 - 2044812 + | aldehyde ferredoxin oxidoreductase (aor-4) rpoD 2045611 - 2044817 - | DNA-directed RNA polymerase subunit D TERM 893 2045537 - 2045549 + g 70 -4.8 -4.60041 | GAAGGAGTTTGCAAG CGCT GGAGA AGCG TTTTTCAAAATAAAT rps11p 2046012 - 2045611 - | 30S ribosomal protein S11P rps4p 2046530 - 2046012 - | 30S ribosomal protein S4 rps13p 2046976 - 2046536 - | 30S ribosomal protein S13P idsA 2048061 - 2047081 - | bifunctional short chain isoprenyl diphosphate synthase (idsA) AF2287 2048993 - 2048040 - | isopentenyl pyrophosphate isomerase AF2288 2049796 - 2049074 - | acetylglutamate kinase, putative mvk 2050631 - 2049777 - | mevalonate kinase (mvk) TERM 894 2050721 - 2050756 + H 76 -11 -2.52623 | overlap 2050720 2050717 TCTACACCGTCTACA CCTCCGACCCCGCAGC GGAG GCTGGGAGGATGGAGG CTATTATGGAGGAGC AF2290 2050848 - 2051411 + | acetylpolyamine aminohydrolase, putative TERM 895 2051874 - 2051902 + G 84 -2.4 -5.54192 | overlap 2051877 TCTATATTGTCTATA TTAGCTGCAGTT TTGAC AATAGCAGCTTA TTTTTTTACATTAGT TERM 896 2051877 - 2051899 + G 72 -4.1 -4.83715 | overlap 2051874 ATATTGTCTATATTA GCTGCAGTT TTGAC AATAGCAGC TTATTTTTTTACATT AF2291 2051760 - 2052545 + | hypothetical protein AF2292 2053570 - 2052707 - | hypothetical protein TERM 897 2053450 - 2053486 + g 73 -3 -5.00616 | gap 1 TCTTCTCCTCGACCC TC-CTTTTCCGCTCCTC GGGT GTGGAGCCAAAAAGCGA TTTTTTGAGCAGCGC AF2293 2053754 - 2053548 - | hypothetical protein AF2294 2054943 - 2053777 - | hypothetical protein AF2295 2056291 - 2055047 - | group II decarboxylase cydA-1 2057423 - 2056335 - | cytochrome oxidase,subunit I (cydA-1) TERM 898 2056502 - 2056476 - G 72 -10 -3.35934 | GTAGAGATTGGAGAA GGCGGCAATGGG AAT CCCTTCGCTGCC TGTAACCACCATGTA cydA-2 2059017 - 2057410 - | cytochrome oxidase, subunit I (cydA-2) TERM 899 2058049 - 2058019 - G 79 -11.2 -3.53444 | opp_overlap 2058028, overlap 2058028 GCACTGCCTCTCAAA CTCATCAAAGCCAA CAA TCGGCCTTGATGGG TCGCCGTAGGCAACA TERM 900 2059046 - 2059070 + r 76 -4.3 -5.03747 | ACATAAAATTTAATC TTTTCGTTCGA TTA TCGAAAGCAAA TTTTTTAAACGATTT AF2298 2059986 - 2059144 - | hypothetical protein AF2299 2061055 - 2060021 - | hypothetical protein dys1-2 2061948 - 2061052 - | putative deoxyhypusine synthase TERM 901 2061137 - 2061122 - G 70 -9 -3.62591 | opp_overlap 2061121 GCCAGAACTGGCAAA GCGATG GTAG CATCGC AGTTTACCTGCACCT AF2301 2062569 - 2062009 - | pyruvoyl-dependent arginine decarboxylase AF2302 2062848 - 2063474 + | hypothetical protein rimK 2063452 - 2064312 + | ribosomal protein S6 modification protein (rimK) TERM 902 2064416 - 2064392 - g 71 -10.8 -3.17571 | gap 1 AATCGGGGAAGTTAA GCCG-AAAGCG ATAG CGCTTTTCGGC TCTCAGGCTAAGGGA AF2304 2064351 - 2064689 + | hypothetical protein AF2305 2064899 - 2065069 + | hypothetical protein AF2306 2065543 - 2065070 - | hypothetical protein TERM 903 2065305 - 2065317 + g 70 -9.1 -3.61764 | opp_overlap 2065303 TCGAAGGTGAAAGGT CCTGC AAC GCAGG TTTCGGGCTTGATGC AF2307 2066637 - 2065540 - | hypothetical protein TERM 904 2066264 - 2066274 + g 79 -6.8 -4.66537 | CTCTGGATGTTAAGC CAGC CAT GCTG TTTTATGTTGAAAAG arsB 2067839 - 2066646 - | arsenite transport protein (arsB) TERM 905 2067211 - 2067226 + g 76 -5.4 -4.7629 | overlap 2067213 GCCGCTAACCTCCTG TTGAGG TTCA CCTCGA TTTTTCCATTCCTGA TERM 906 2067316 - 2067296 - G 71 -6.1 -4.41897 | opp_overlap 2067301, overlap 2067298 AATAAACTATGAAAA TCCCCGCTA CTC CAACGGGAA GCATTTTTGCAGTGA AF2309 2069453 - 2067840 - | hypothetical protein AF2310 2069500 - 2070285 + | hypothetical protein AF2311 2070394 - 2070543 + | hypothetical protein rr4 2070519 - 2071034 + | rubrerythrin (rr4) maoC 2071080 - 2071535 + | maoC protein (maoC) ogt 2071956 - 2071513 - | methylated-DNA-protein-cysteine methyltransferase (ogt) AF2315 2072480 - 2071956 - | hypothetical protein AF2316 2074033 - 2072477 - | hypothetical protein TERM 907 2073824 - 2073842 + g 89 -14.6 -3.64487 | GATGCCGTGACCGTC GGCAGCGA ACC TCGCTGCC TTCTTGAACATCTCG AF2317 2074712 - 2074113 - | hypothetical protein AF2318 2075134 - 2074697 - | hypothetical protein rpl15E 2075715 - 2075131 - | 50S ribosomal protein L15e TERM 908 2075772 - 2075758 - R 72 -10 -2.73875 | opp_overlap 2075745, overlap 2075741 2075755 GCCTCGGCAACAGCA GGCTGA GTT TCAGCC TCAGCAGGTTCCGCA rps3AE 2076368 - 2075733 - | 30S ribosomal protein S3Ae AF2321 2076421 - 2076966 + | hypothetical protein TERM 909 2077013 - 2077026 + GF 72 -3.8 -4.82901 | opp_overlap 2077013 CGAGGCGATAAGAAA GGTG CCCAGA CACC TTTTTGTGCCCGAGA pcm-2 2076924 - 2077583 + | L-isoaspartyl protein carboxyl methyltransferase (pcm-2) cobS-2 2077576 - 2078271 + | cobalamin (5'-phosphate) synthase (cobS-2) AF2324 2079561 - 2078248 - | fmu and fmv protein AF2325 2079815 - 2079531 - | hypothetical protein AF2326 2080237 - 2079824 - | translation initiation factor IF-2 subunit beta aroE 2080310 - 2081119 + | shikimate 5-dehydrogenase (aroE) TERM 910 2081369 - 2081351 - g 81 -13.2 -3.07043 | opp_overlap 2081348 TCGATTACTTCAACA TCCTCGAC GAG GTCGAGGA GGATGTTGAGCCCAC gatC 2081236 - 2081517 + | aspartyl/glutamyl-tRNA amidotransferase subunit C gatA-2 2081514 - 2082887 + | Glu-tRNA amidotransferase, subunit A (gatA-2) AF2330 2083298 - 2082909 - | hypothetical protein AF2331 2083573 - 2083295 - | hypothetical protein TERM 911 2083559 - 2083535 - G 74 -7.2 -4.15222 | ATGCCCCTCAAGAAA CTTCAGAAAG CTCTC CTTGCTGAAG ACGTAGGCTGGCATA TERM 912 2084161 - 2084140 - g 71 -5.7 -4.42788 | CCGAATTTTACAAAA GCTTCGCTC TGAA GTGCGGAGC CAAAAAAGCTGATTA AF2332 2083812 - 2084258 + | flavodoxin, putative TERM 913 2084257 - 2084241 - T 83 -5.1 -5.30189 | overlap 2084243 GATAACATCAAAAAA TGGCTGA AGA TCAGCTA ACGGCCGTCTCGACG AF2333 2085393 - 2084251 - | hypothetical protein speE 2086169 - 2085360 - | spermidine synthase (speE) AF2335 2086203 - 2086715 + | hypothetical protein est-3 2087459 - 2086716 - | carboxylesterase (est-3) TERM 914 2087836 - 2087826 - R 75 -5.4 -4.72272 | TTGCCTCATCAAAAA CACT AAC AGTG ATCAGCCTTGAAGCG AF2337 2089175 - 2088264 - | hypothetical protein TERM 915 2089348 - 2089319 - H 71 -7.3 -3.79481 | gap 1, opp_overlap 2089323 2089326 CAAATTCAACTGAAA TCAACG-AGATTCA GAA TGATTCTACGTTGA TTCAACCCCAACATC AF2338 2089515 - 2090525 + | hypothetical protein AF2339 2090498 - 2090728 + | hypothetical protein AF2340 2090797 - 2092698 + | hypothetical protein AF2341 2092698 - 2093009 + | hypothetical protein AF2342 2093329 - 2093066 - | hypothetical protein AF2343 2093519 - 2093322 - | hypothetical protein AF2344 2093630 - 2093770 + | hypothetical protein TERM 916 2093899 - 2093883 - g 74 -2.2 -5.10665 | AGCGAAGAAAGAAAA GCTCGG AAATG CCAAAC CCCCTATCTTCTCCC TERM 917 2094082 - 2094070 - g 75 -10.5 -3.46202 | AAAGATATCAACGAA GGGCC AAG GGCCC ACACACAGGATCCTC AF2345m 2093818 - 2096075 + | DNA methylase containing a Zn-ribbon module AF2348 2096084 - 2096422 + | hypothetical protein AF2350 2096875 - 2099706 + | ATP-dependent RNA helicase HepA, putative AF2351 2099926 - 2100345 + | hypothetical protein AF2352 2100342 - 2100617 + | NADH dehydrogenase, subunit 1, putative AF2353 2101053 - 2101358 + | hypothetical protein TERM 918 2101653 - 2101642 - g 70 -3 -4.78661 | ATTGAAAAAGCAAAA GAAT TGGG ATTC AATACGGAAATCCTT AF2354 2101462 - 2101749 + | hypothetical protein AF2355 2102052 - 2102273 + | hypothetical protein AF2356 2102386 - 2102829 + | hypothetical protein AF2357 2102819 - 2103841 + | hypothetical protein AF2358 2105070 - 2103892 - | hypothetical protein AF2359 2105685 - 2105912 + | hypothetical protein TERM 919 2106278 - 2106246 - g 73 -5 -4.64763 | gap 2 GTAGGGAAAAAATAA GCCTT-GCAACCT-TC GAC GAGAGGTTGAGAAGGC AGGCGAGAGCAAGAG AF2360 2105909 - 2106313 + | hypothetical protein AF2361 2107205 - 2106330 - | mRNA 3'-end processing factor, putative TERM 920 2107175 - 2107154 - G 74 -7.3 -4.15061 | gap 1, opp_overlap 2107153 2107154 CAATGCAGAGAGAAA GGT-GGGGTC TGC AACCCCTACC GTATTTCCTTCTGTA TERM 921 2107374 - 2107392 + G 70 -9.6 -3.32066 | AATCTTCTACATCTT CTTCACGA GAA TCGTGGAG TTATCGGCGATTATT AF2362 2107258 - 2107743 + | hypothetical protein AF2363 2109107 - 2107785 - | hypothetical protein AF2364 2109210 - 2109974 + | ABC transporter, ATP-binding protein TERM 922 2110676 - 2110666 - gf 71 -6.8 -4.09685 | TTTGATGGGTGAAAA CAGC AGA GCTG AAATCATATCGAGAA TERM 923 2110767 - 2110734 - gf 70 -9.7 -2.72954 | gap 1, overlap 2110724 2110729 2110731 CAAGAGGACACATCA TCGGAGATGCCCCTGA GGT TAAGGGACATCTC-GA GTGCAAGGGTTTGAT AF2365 2109932 - 2111041 + | hypothetical protein TERM 924 2111691 - 2111681 - f 73 -5.4 -4.52589 | TCCTTTGAGAGAAAA GTAG GGA CTAC AAGCTTCATAAAGCT TERM 925 2112461 - 2112451 - g 70 -8.2 -3.67134 | opp_overlap 2112448 AAACTACCCCAACAA CCCC ACC GGGG CGGTAATTGACGAGA aspB-1 2111951 - 2113072 + | aspartate aminotransferase (aspB-1) AF2367 2113053 - 2113619 + | hypothetical protein fadD-9 2115304 - 2113616 - | long-chain-fatty-acid--CoA ligase (fadD-9) AF2369 2116334 - 2115345 - | hypothetical protein AF2370 2116973 - 2116368 - | hypothetical protein TERM 926 2116558 - 2116580 + gH 72 -9.2 -3.32022 | GGTGGTTTCTCTTCT GATTCGGC CTTAGCT GCCGAATC TTCCTCTATAACGAC AF2370a 2116804 - 2117058 + | hypothetical protein AF2371 2117144 - 2117602 + | hypothetical protein TERM 927 2118362 - 2118342 - g 70 -2.5 -4.98531 | GCCGCAAATGAAAAA CTCCATC CAAAGCT GCTGGAG CTGATTAAATGAGGG suhB 2117616 - 2118374 + | extragenic suppressor (suhB) TERM 928 2119056 - 2119042 - g 73 -5.6 -4.63007 | opp_overlap 2119042 2119040 2119038, overlap 2119044 GATAACCATAGAAAA GTCGGA ATT TCCGGC TGTGTTCTTCAAAAA TERM 929 2119099 - 2119072 - g 71 -5.6 -4.56597 | opp_overlap 2119080, overlap 2119075 2119080 TGTGTTCTTCAAAAA CGAGAAAAGGTT CAGG AACCTTTTCGGG AAAGTTAGGAGCATA TERM 930 2119096 - 2119075 - g 73 -10.3 -3.23708 | opp_overlap 2119080, overlap 2119072 2119080 GTTCTTCAAAAACGA GAAAAGGTT CAGG AACCTTTTC GGGAAAGTTAGGAGC TERM 931 2119091 - 2119080 - g 70 -4.4 -4.72556 | opp_overlap 2119080, overlap 2119075 2119072 TCAAAAACGAGAAAA GGTT CAGG AACC TTTTCGGGAAAGTTA AF2373 2118371 - 2119120 + | hypothetical protein AF2374 2119280 - 2119753 + | hypothetical protein TERM 932 2119816 - 2119800 - gf 73 -10.1 -2.78992 | overlap 2119799 2119809 AGTCAGTCCAACAAC TGGCAGC AAG GCCGCCA CCTCATCGACGACCC TERM 933 2121227 - 2121211 - gf 71 -9.5 -2.9162 | opp_overlap 2121214, overlap 2121214 2121215 GAACGGCGGAAATTA TAAGCCA GAA TGGCTTA CTGGGTAAGTGAGGT AF2375 2119719 - 2121239 + | hypothetical protein AF2376 2121220 - 2121792 + | hypothetical protein AF2377 2121908 - 2122231 + | hypothetical protein AF2378 2122279 - 2122713 + | hypothetical protein AF2379 2122704 - 2122961 + | hypothetical protein TERM 934 2123011 - 2123042 + G 74 -4.4 -4.8048 | opp_overlap 2123001 2123002 GAAAACGACCGTTGC GGTGAATCTGGCTG TATT CAACCACATTGACC TTTTTGATCTGGACG AF2380 2122958 - 2123746 + | iron-sulfur cluster binding protein TERM 935 2124345 - 2124361 + G 70 -8.7 -3.54459 | AGGGTTGAGCGACAT GCTCAGG ATT CTTGAGC TTTGCGAACACTTCA AF2381 2123743 - 2124594 + | iron-sulfur cluster binding protein AF2382 2124595 - 2125359 + | nucleotide-binding protein AF2383 2125393 - 2126046 + | hypothetical protein TERM 936 2126545 - 2126534 - g 70 -2.2 -5.04385 | GACAGGCTGAAAAAA CCTC TCAT AAGG ACGGGTGAGAAAGGC TERM 937 2128615 - 2128597 - g 78 -9.6 -3.88787 | TGAGAGGCTGACAAA CATTCCCC AGA GAGGAATG ACGATGATGAGGTTG AF2384 2126237 - 2128705 + | molybdopterin oxidoreductase, molybdopterin binding subunit AF2385 2128716 - 2129264 + | molybdopterin oxidoreductase, iron-sulfur binding subunit AF2386 2129269 - 2130186 + | molybdopterin oxidoreductase, membrane subunit TERM 938 2130270 - 2130292 + G 71 -6.2 -4.3821 | TGCCATATTCGCAAC CCTCTACGTG ATA CAGGTAGCGG TTTCTGTTGTCTTTT AF2387 2130229 - 2130663 + | hypothetical protein TERM 939 2130892 - 2130875 - g 70 -9.1 -3.54935 | TAAAGGTTGCTGAAA GGCCTGC TGAT GCAAGCC ACCCATACGGGCACT AF2388 2130697 - 2131851 + | hypothetical protein AF2389-N 2131926 - 2133640 + | acetyl-CoA synthetase, putative AF2389-C 2134958 - 2135155 + | acetyl-CoA synthetase, putative TERM 940 2135187 - 2135204 + F 70 -2.7 -5.09225 | opp_overlap 2135187 TTTTTCGCTTAAAAC TTTTAGG TTAA CCGAAAA TTTTTTAAGTCAACT TERM 941 2135293 - 2135270 - g 77 -10.2 -3.58726 | overlap 2135271 CTGGCGGAGACAGAA CCGGACCCTG GGGT CAGGGGCCGA GAACTGGCAGAAGAG TERM 942 2135292 - 2135271 - g 71 -11.5 -2.75022 | overlap 2135270 TGGCGGAGACAGAAC CGGACCCTG GGGT CAGGGGCCG AGAACTGGCAGAAGA AF2391 2135251 - 2135451 + | hypothetical protein AF2392 2135451 - 2135711 + | hypothetical protein AF2393 2136090 - 2135713 - | hypothetical protein feoB-2 2137697 - 2136006 - | iron (II) transporter (feoB-2) TERM 943 2136970 - 2136954 - GR 81 -5.8 -5.05601 | GAGCATAGAGAAAAA CCAGCC GTCGA AGCTGG CAATGTAAGACGCCA TERM 944 2137472 - 2137482 + gr 70 -4.6 -4.63527 | CATTGAGAATGAGGT CGGG CTT CTCG TTTTTCAGGTAATCC AF2395 2138160 - 2137714 - | iron-dependent repressor AF2396 2138377 - 2138141 - | hypothetical protein cdhA-2 2138582 - 2140978 + | acetyl-CoA decarbonylase/synthase complex subunit alpha cdhB-2 2140989 - 2141516 + | acetyl-CoA decarbonylase/synthase complex subunit epsilon TERM 945 2142020 - 2142007 - g 70 -2.3 -5.05782 | overlap 2142008 ATTCATCGTAAAAAA GGCCT TAAC AGGCG GCTCCTTCATTCTCT AF2399 2141795 - 2142469 + | rRNA methylase, putative AF2400 2142492 - 2145002 + | hypothetical protein AF2401 2144992 - 2146038 + | hypothetical protein AF2402 2146053 - 2147606 + | hypothetical protein AF2403 2147844 - 2147626 - | hypothetical protein AF2404 2148108 - 2148398 + | hypothetical protein AF2405 2148497 - 2148775 + | hypothetical protein AF2406 2151072 - 2148772 - | ATP-dependent RNA helicase, putative AF2407 2151720 - 2151109 - | hypothetical protein AF2408 2152394 - 2151942 - | hypothetical protein AF2409 2152437 - 2153141 + | iron-sulfur cluster binding protein AF2410 2153185 - 2153646 + | hypothetical protein AF2411 2153688 - 2154779 + | hypothetical protein thiC 2154819 - 2156096 + | thiamine biosynthesis protein ThiC TERM 946 2156169 - 2156135 - g 76 -11.5 -3.32844 | gap 1 TCTGGGAGCTCACAA GGGCCTGCA-TGCTCG CATG CAAGCACTGCAGGGCC AAGGCCATTCGCAAA pqqE 2156098 - 2157225 + | coenzyme PQQ synthesis protein (pqqE) AF2414 2157293 - 2157982 + | hypothetical protein acaA-2 2157979 - 2158890 + | hypothetical protein TERM 947 2159592 - 2159571 - g 83 -13.1 -3.61404 | TCAGGAAGGAGATAA GAGTTGAGG ACGT CCTCAACTC CCCCTACGTTGCCGA acaB-12 2159006 - 2160160 + | acetyl-CoA acetyltransferase AF2417 2160165 - 2160533 + | hypothetical protein AF2418 2161156 - 2160530 - | DNA repair protein, putative AF2419 2161497 - 2161153 - | response regulator AF2420 2163118 - 2161475 - | signal-transducing histidine kinase, putative TERM 948 2162685 - 2162699 + g 87 -4.9 -5.52384 | ATGAACTTTTCAATT GCCGG AGGAA CTGGC TTTTTTTCCTGAAAC leuS 2165957 - 2163159 - | leucyl-tRNA synthetase AF2422 2166504 - 2166016 - | hypothetical protein AF2423 2167142 - 2166513 - | hypothetical protein AF2424 2168359 - 2167139 - | hypothetical protein moxR 2169314 - 2168340 - | methanol dehydrogenase regulatory protein (moxR) TERM 949 2169147 - 2169137 - G 71 -5.4 -4.58283 | overlap 2169126 2169125 TAACCCTCGCAAAAA CCTT TGC AAGG AGGGTTTTACCCAGG AF2426 2169400 - 2170248 + | hypothetical protein TERM 950 2171056 - 2171045 - g 71 -7.2 -4.07455 | CATGAAGAGCAGAAA GGGC TGGA GCCC TGCGGAGGTTATCGA AF2427 2170245 - 2172128 + | hypothetical protein TERM 951 2172793 - 2172779 - g 74 -10 -3.55071 | GGAGATGCGCTGAAA GAGCTC GCA GAGCTC GGATACGACGGTCCT AF2428 2172128 - 2172916 + | hypothetical protein fad-5 2172947 - 2173678 + | enoyl-CoA hydratase (fad-5) TERM 952 2174239 - 2174226 - g 70 -8.1 -3.66178 | opp_overlap 2174226 GCTTTTAATTGCAAA CGGCA TCAG TGCCG TGCTTGCCGGCCATA icc 2173729 - 2174847 + | lacZ expression regulatory protein (icc) TERM 953 2174875 - 2174858 - T 75 -10.5 -3.22924 | opp_overlap 2174853, overlap 2174856 CTTAAATCACGAATA CCGCCGC TGCA ACGGCGG TGGTGAACTCCTTAA AF2431 2175317 - 2174844 - | pyruvoyl-dependent arginine decarboxylase AF2432 2175947 - 2175504 - | hypothetical protein AF2433 2176281 - 2175922 - | hypothetical protein AF2434 2176676 - 2176398 - | hypothetical protein AF2435 2177635 - 2176667 - | hypothetical protein AF2436 2178146 - 2177643 - | hypothetical protein