TransTermHP v2.07 (built on Jan 21 2009) 25 bins; sample size is 20000000 --pval-conf=/fs/szasmg2/carlk/TTupdate2/expterm.dat --gc=-2.3 --au=-0.9 --gu=1.3 --mm=3.5 --gap=6 --max-len=59 --min-stem=4 --max-loop=13 --min-loop=3 --uwin-length=6 --uwin-require=3 --max-hp-score=-2 --max-tail-score=-2.5 --loop-penalty=1,2,3,4,5,6,7,8,9,10,11 --start-cut=0 --end-cut=25 Genes: 0.713712 %AT, 515122 nt, 2672 terms. Intergenic: 0.776889 %AT, H2T: 155439 nt, 1059 terms; T2T: 36435 nt, 788 terms; H2H: 39196 nt, 741 terms. Each terminator entry starts in column 3 and is of the form: term # start - end +/- regionconf hp tail | notes Followed by the sequence of the 5' tail, 5' stem, loop, 3' stem, and 3' tail. Genes are interspersed, and start the first column. SEQUENCE gi|85057280|ref|NC_007716.1| Aster yellows witches'-broom phytoplasma AYWB, complete genome (length 706569) TERM 1 151 - 122 - g 75 -3.7 -5.52096 | opp_overlap 129, overlap 125 129 145 AAATTGAAGAAAAAA TTATAATTTCAGT AGAA ACTGAATTTATTA AAAATAAAATATATA TERM 2 129 - 144 + G 70 -6.2 -4.16842 | opp_overlap 129 125 122 AGAAAAAATTATAAT TTCAGT AGAA ACTGAA TTTATTAAAAATAAA TERM 3 388 - 373 - g 70 -4.8 -4.76802 | overlap 369 TTTAAAAATAATAAA CATTTT AGAA AAAATG AAATAAAACAAATTG dnaA 1 - 1515 + | chromosomal replication initiation protein dnaN 1709 - 2845 + | DNA polymerase III, beta subunit TERM 4 2853 - 2863 + F 72 -2.6 -5.86332 | ATGATTGATATTTTT TATA TTT TATA TTTTTTTTACATTGC rpsF 3331 - 3618 + | 30S ribosomal protein S6 AYWB_004 3633 - 3812 + | hypothetical protein rpsR 4082 - 4321 + | 30S ribosomal protein S18 TERM 5 4325 - 4340 + F 79 -2.5 -6.15536 | opp_overlap 4319 4316, overlap 4328 ATTCAACAATAAAAA CAGGG GTTGCA TCCTG TTTTTTTTATTAATT TERM 6 4437 - 4413 - f 71 -3.7 -5.44721 | ATGAGGGCAAAAAAA TTATGTTTTCT AAA AATAAACATAA CACCAAATTTATTGT TERM 7 5487 - 5472 - g 70 -6.2 -4.07687 | ATTTTGGTGCTAAAA TTGCTT CTTT AAGCAA ACAATCCAAAGTGCA AYWB_006 4415 - 6964 + | exopolyphosphatase-related protein TERM 8 8189 - 8176 - g 74 -2.3 -5.69068 | GAAAAAGACAAAAAA CCTGA TTCT TCTGG GCACACTCAAGTTAT dnaB 6961 - 8304 + | replicative DNA helicase prfA 8371 - 9426 + | peptide chain release factor 1 TERM 9 9856 - 9840 - g 90 -3.7 -6.10489 | AATTTTAAAAAAAAA TGGTCCT TTA AAAACCA CTTCTGTTAACCAAA sua5 9511 - 10101 + | translation factor SUA5 protein holA 11081 - 10110 - | DNA polymerase III, delta subunit TERM 10 10474 - 10463 - G 73 -3 -5.40072 | TTTGTTTTAAAAAAA GATT AATT AATC CAAAAATATTGTCAT AYWB_011 11337 - 11927 + | GTPase EngB TERM 11 12481 - 12464 - g 72 -6.3 -4.27026 | GTGGAAAGAAAAACA TGCCCAA AATA TTAGGCA ACAATGGCAAGTTTT TERM 12 13136 - 13119 - g 82 -2.7 -6.07627 | overlap 13120 13135 ACTCTTAAAAAAAAA GGATTTT TCAC AAAAACC GAAATCCACCTTTAT valS 12105 - 14735 + | valyl-tRNA synthetase AYWB_013 14882 - 15439 + | hypothetical protein cbiO 15472 - 17313 + | ABC-type cobalt transport system, ATP-binding protein TERM 13 17434 - 17444 + G 71 -4.6 -4.95487 | TGTGTGGTTTTTATT GGGG CTT TCCC TTTTGTCTTTGTTTT cbiQ 17303 - 18148 + | ABC-type cobalt transport system, permease component CbiQ AYWB_016 21278 - 18204 - | hypothetical protein TERM 14 19074 - 19086 + g 87 -2.7 -6.23317 | GGTTGATTTGATATT GGTTT CTA AAATC TTTTTTTGTTTTTCT ibpA 21643 - 22065 + | molecular chaperone TERM 15 22116 - 22062 - T 80 -8.49999 -4.06361 | gap 1, opp_overlap 22062 22064 22066 22068 22070 22079, overlap 22066 22068 22079 TTATATACAATTAAA TTA-AGATATAATAAAAACAAGTTAA TTAA TTAACTTGTTTTTATTATATATATGA TTATTATTTTTATTG TERM 16 22062 - 22116 + T 93 -10.7 -4.40123 | gap 1, opp_overlap 22062 22066 22068 22079, overlap 22064 22066 22068 22070 22079 TTATATACAATTAAA TTA-AGATATAATAAAAACAAGTTAA TTAA TTAACTTGTTTTTATTATATATATGA TTATTATTTTTATTG TERM 17 22064 - 22113 + T 91 -12.7 -3.13046 | opp_overlap 22062 22066 22068 22079, overlap 22062 22066 22068 22070 22079 ATATACAATTAAATT AAGATATAATAAAAACAAGTTAA TTAA TTAACTTGTTTTTATTATATATA TGATTATTATTTTTA TERM 18 22111 - 22066 - T 100 -15.3 -3.64257 | opp_overlap 22064 22062 22066 22068 22070 22079, overlap 22062 22068 22079 ATACAATTAAATTAA GATATAATAAAAACAAGTTAA TTAA TTAACTTGTTTTTATTATATA TATGATTATTATTTT TERM 19 22066 - 22111 + T 100 -15.3 -3.0914 | opp_overlap 22066 22062 22068 22079, overlap 22064 22062 22068 22070 22079 ATACAATTAAATTAA GATATAATAAAAACAAGTTAA TTAA TTAACTTGTTTTTATTATATA TATGATTATTATTTT TERM 20 22109 - 22068 - T 100 -17.9 -3.38638 | opp_overlap 22066 22064 22062 22068 22070 22079, overlap 22066 22062 22079 ACAATTAAATTAAGA TATAATAAAAACAAGTTAA TTAA TTAACTTGTTTTTATTATA TATATGATTATTATT TERM 21 22068 - 22109 + T 100 -17.9 -3.07845 | opp_overlap 22068 22066 22062 22079, overlap 22066 22064 22062 22070 22079 ACAATTAAATTAAGA TATAATAAAAACAAGTTAA TTAA TTAACTTGTTTTTATTATA TATATGATTATTATT TERM 22 22070 - 22107 + T 100 -16.1 -3.08176 | opp_overlap 22068 22066 22062 22079, overlap 22068 22066 22064 22062 22079 AATTAAATTAAGATA TAATAAAAACAAGTTAA TTAA TTAACTTGTTTTTATTA TATATATGATTATTA TERM 23 22098 - 22079 - T 93 -8 -5.28561 | opp_overlap 22070 22068 22066 22064 22062 22079, overlap 22068 22066 22062 AAGATATAATAAAAA CAAGTTAA TTAA TTAACTTG TTTTTATTATATATA TERM 24 22079 - 22098 + T 93 -8 -5.27206 | opp_overlap 22079 22068 22066 22062, overlap 22070 22068 22066 22064 22062 AAGATATAATAAAAA CAAGTTAA TTAA TTAACTTG TTTTTATTATATATA TERM 25 22626 - 22606 - T 74 -3.3 -5.85737 | opp_overlap 22612 ATATTAACAAAAAAA GACCTCT AAAAAAA AGAGATC TTTATTTTATAAATT mgtA 25422 - 22660 - | cation transport ATPase TERM 26 25632 - 25651 + H 76 -4.4 -5.5074 | overlap 25634 TGGTTAGTCTTGTTT TATACAAA TCCA TTTGTATG TTTTTTCTTGCCTTC TERM 27 26943 - 26955 + G 90 -3.3 -6.06723 | opp_overlap 26943 CATTCAAGAAACAAC CACCG ATT CGATG TTTTTTTTTGGACAA AYWB_019 26212 - 27330 + | hypothetical protein TERM 28 27431 - 27415 - f 77 -6.7 -4.64861 | opp_overlap 27414 27417, overlap 27417 TTTTGCCAAAATAAA CTTTTTT TTA AAAAAAG ACTTTAAAAAAACTC TERM 29 28066 - 28055 - f 73 -4.4 -5.26119 | opp_overlap 28055, overlap 28050 TTTGCAAAAAGAAAA CCTT TTTC AAGG TTTTAATGAGGTGTT TERM 30 28308 - 28323 + G 72 -6.2 -4.26398 | overlap 28317 28318 TTCTCGTACATGTTT TTCTTG TCCT CAAGAA TCTTTTTTGGTATTA AYWB_020 28165 - 28362 + | hypothetical protein AYWB_021 28378 - 28533 + | hypothetical protein TERM 31 28562 - 28582 + F 93 -8.3 -5.26119 | TTTTTAATTAATTTT GCTGTCTAA TTA TTGGACGGC TTTTGTTTTTGGAAA TERM 32 28617 - 28602 - f 71 -3.4 -5.40072 | opp_overlap 28602, overlap 28614 GTTTTTGGAAAAAAA TAAATA AAAT TATTTA TAAATTACAAAAACT AYWB_022 28892 - 29269 + | hypothetical protein TERM 33 29247 - 29278 + F 73 -4.8 -5.16841 | opp_overlap 29250, overlap 29276 TTAATTTAAAACCAT TAATTAAAATTA TAGAAGAT TAATTTTAATTA TTTTTATTAATATAA TERM 34 29312 - 29299 - f 72 -2.5 -5.82172 | opp_overlap 29276 29299 ATTAATATAAAAAAA TAATA TATT TATTA ATTCTCATTAAAGAC TERM 35 29325 - 29340 + F 82 -4.6 -5.79595 | opp_overlap 29325, overlap 29327 TTAATTCTCATTAAA GACCCT TTTC AGGGCC TTTTTTATTTTAAAA TERM 36 30163 - 30144 - f 82 -5 -5.58074 | opp_overlap 30146, overlap 30146 GAACCATTAAAAAAA TACCAACT TTTA AGTTGGTT TCCTTATTTTTTCTA TERM 37 30161 - 30146 - f 80 -7.6 -4.41456 | opp_overlap 30146, overlap 30144 ACCATTAAAAAAATA CCAACT TTTA AGTTGG TTTCCTTATTTTTTC TERM 38 30146 - 30161 + F 78 -7.6 -4.29369 | opp_overlap 30146 30144 ACCATTAAAAAAATA CCAACT TTTA AGTTGG TTTCCTTATTTTTTC TERM 39 30551 - 30521 - f 88 -10 -3.7829 | opp_overlap 30525, overlap 30524 ATTACATGGATTAAA TAATGAGTTTTTTT AAA AAAAACACTCATTA AGGGATAATATATGA TERM 40 30548 - 30524 - f 74 -7.3 -4.01902 | opp_overlap 30525, overlap 30521 ACATGGATTAAATAA TGAGTTTTTTT AAA AAAAACACTCA TTAAGGGATAATATA AYWB_023 30600 - 30833 + | hypothetical protein AYWB_024 30736 - 31125 + | hypothetical protein TERM 41 31172 - 31186 + F 81 -5.8 -5.16151 | CAGCTTTTAAGTTGA TCTTTT TTT AAAAGA TTTTTCTTGCATTTC TERM 42 31858 - 31870 + G 71 -7.7 -3.58184 | opp_overlap 31857 ACTATGGTAAAGCAG GCGAT ACT ATCGC TTCTAATTATAATGT nrdA 31581 - 34118 + | ribonucleoside-diphosphate reductase alpha chain TERM 43 34247 - 34281 + F 74 -8.1 -3.64259 | opp_overlap 34255, overlap 34255 34276 ATTTTGTTTTTTTGT TAAAATAAGGCTATC ACATG GATAGTCTTTTTTTA TTCTTAAAAATAATT TERM 44 34255 - 34273 + F 86 -5.3 -5.95946 | opp_overlap 34255, overlap 34247 TTTTTGTTAAAATAA GGCTATC ACATG GATAGTC TTTTTTTATTCTTAA TERM 45 34804 - 34782 - g 82 -2.7 -5.94597 | gap 1, overlap 34786 GAACACCAAAAAAAA GCTACCCTTA ATTT TATGGG-AGC TATGGAAAATGCAGT nrdF 34482 - 35534 + | ribonucleotide-diphosphate reductase subunit beta TERM 46 35763 - 35736 - f 75 -8.8 -3.48236 | opp_overlap 35736 35736 35736 35736 35736, overlap 35730 TAAATACAATATGAA TATATATATATA TATA TATATATATATA ACTATTGAAATTATG TERM 47 36761 - 36780 + F 82 -3 -6.12328 | TTTAGTTTTTATTAT TAGTTTTA TTAG TAAAATTA TTTTTTTTATATTAT TERM 48 37414 - 37431 + F 84 -7.1 -5.03314 | opp_overlap 37414 37412 GTAATCCAACTAATA CTAACTT AGAA AAGTTAG TTTTTTAAAAATAAA TERM 49 38060 - 38046 - g 78 -7.2 -4.57341 | AATGTCTTGGAAAAA TCCTTT GCA AAAGGA AAAAACCGATAAAAA mscL 37720 - 38157 + | large-conductance mechanosensitive channel TERM 50 38215 - 38231 + F 100 -8.1 -5.83226 | opp_overlap 38214 38217 CAAACAATTATAAGG GACTATT TTT AATAGTC TTTTTTTATTAAGTT evbG 38354 - 40078 + | multidrug resistance ABC transporter ATP-binding and permease protein TERM 51 40801 - 40817 + GT 70 -2.3 -5.38951 | opp_overlap 40801 AAGTGTTTAGAAAAG TTAGTTT TTA AATCTAA TTTTTTGTCTGGATT evbH 40024 - 41868 + | multidrug resistance ABC transporter ATP-binding and permease protein TERM 52 41918 - 41895 - T 76 -6.8 -4.39414 | opp_overlap 41895 AATATTAAATATAAA GACCAAATAT TTAT ATAGTTGGTC TTTCTTTTCTAAAAA TERM 53 41895 - 41918 + T 81 -6.8 -4.77173 | opp_overlap 41895 AATATTAAATATAAA GACCAAATAT TTAT ATAGTTGGTC TTTCTTTTCTAAAAA TERM 54 42012 - 41999 - T 78 -3.9 -5.86609 | TTAAAAAAATAAAAA GAATT TAGA AATTC GTAATCAATTAATTG AYWB_030 43134 - 42859 - | hypothetical protein AYWB_031 43403 - 43086 - | hypothetical protein TERM 55 44298 - 44311 + H 71 -3.1 -5.61689 | overlap 44299 GCCTGTCTTAGGGTT TCTAC TAGT GTAGG TTTTTTCTTGGTTTT TERM 56 44682 - 44660 - H 100 -9.3 -5.50723 | opp_overlap 44663 TGATTAAAATAAAAA TAATGGTAC AAAAA GTACCATTA TAATAGAAATAGAAC TERM 57 45476 - 45497 + H 82 -10.3 -3.51708 | overlap 45479 45485 AATTATTTAGGGCTT GAAGTAATC CTAA GATTACTTC TTGGTTTAAAAAATG AYWB_032 46277 - 46684 + | hypothetical protein AYWB_033 46715 - 47068 + | hypothetical protein AYWB_034 47134 - 47316 + | hypothetical protein TERM 58 47363 - 47378 + F 100 -7.6 -6.25578 | opp_overlap 47359 47363 TTAATCAAAAACCAA GAACCT GATG AGGTTC TTTTTTTTATTTAAT TERM 59 47378 - 47363 - f 73 -7.6 -3.88182 | opp_overlap 47363, overlap 47359 TTAATCAAAAACCAA GAACCT GATG AGGTTC TTTTTTTTATTTAAT AYWB_035 47874 - 48041 + | hypothetical protein TERM 60 48079 - 48116 + G 87 -11.6 -2.52676 | opp_overlap 48076 48091, overlap 48091 TATGATAAATTATTT TCATCATTAAAAGAAG ATTATC CTTCTTATAATGATGA TGAATTAGAAAAATA TERM 61 48285 - 48265 - g 75 -7 -4.21827 | opp_overlap 48257, overlap 48257 48255 TTAAATATTTTAAAA CTGATTTT AAAAG AAAATCAG GATTTAAAATTGTAT AYWB_036 48031 - 48408 + | hypothetical protein TERM 62 48482 - 48464 - f 78 -6.2 -4.77036 | opp_overlap 48469, overlap 48469 TTGTATTATGAAAAA TTAAATTA TTA TAATTTAA TAACCTTTTGATGGT AYWB_037 49061 - 49555 + | hypothetical protein AYWB_038 49641 - 49844 + | hypothetical protein AYWB_039 49765 - 50031 + | hypothetical protein AYWB_040 50105 - 50464 + | hypothetical protein TERM 63 50585 - 50600 + GT 71 -6.2 -4.17355 | TTCTCGTACATGTTT TTCTTG TCCT CAAGAA TCTTTTTTAGCATTA AYWB_041 50394 - 50912 + | hypothetical protein TERM 64 51052 - 51072 + T 86 -8.3 -4.89477 | TTTTTAATTAATTTT GCTGTCTAA TTA TTGGACGGC TTTTGTTGTTGGAAA TERM 65 51107 - 51092 - T 71 -3.4 -5.40072 | opp_overlap 51092, overlap 51104 GTTGTTGGAAAAAAA TAAATA AAAT TATTTA TAAATTACAAAAACT TERM 66 51187 - 51160 - T 100 -10.1 -5.79595 | opp_overlap 51160 TTTTAAAACAAAAAA TTAGCTAAACA TTTGAC TGTTTAGCTAA TTTTTTTAGTTGTTA TERM 67 51160 - 51187 + T 100 -10.1 -5.71638 | opp_overlap 51160 TTTTAAAACAAAAAA TTAGCTAAACA TTTGAC TGTTTAGCTAA TTTTTTTAGTTGTTA AYWB_042 51829 - 51203 - | hypothetical protein TERM 68 51527 - 51513 - G 74 -5 -5.00616 | overlap 51520 TGTTGGCTTAAAAAA TCAAGA GTC CCTTGA ATTAAAGGAGTGCTT AYWB_043 52477 - 52274 - | hypothetical protein TERM 69 52535 - 52593 + r 73 -6.7 -4.18161 | opp_overlap 52535 52540 52566, overlap 52540 TAGGATCACAATAAC TTAAATTAATTATTTTTTAATTTTA AAATCACGA TAAATTCAAAAAATAATTAATTTAA TTTTAGAAATTTATC TERM 70 52593 - 52535 - R 74 -8.9 -2.91036 | opp_overlap 52535 52540, overlap 52540 52566 TAGGATCACAATAAC TTAAATTAATTATTTTTTAATTTTA AAATCACGA TAAATTCAAAAAATAATTAATTTAA TTTTAGAAATTTATC AYWB_044 52850 - 52659 - | hypothetical protein AYWB_045 53085 - 52903 - | hypothetical protein AYWB_046 53619 - 53864 + | hypothetical protein AYWB_047 53890 - 54360 + | hypothetical protein TERM 71 54576 - 54554 - f 71 -7.9 -3.19808 | overlap 54552 AAAATTAATTGAATA TGGTTTTAT TAAAG ATAAAACCA ATCAACAAAATAAAA AYWB_048 54792 - 55088 + | hypothetical protein AYWB_049 55376 - 55696 + | hypothetical protein TERM 72 55978 - 55966 - f 79 -4.9 -5.40474 | ATCGGGTTAAAAAAA TACAT CCC ATGTA TAAATATATATCTAA AYWB_050 56593 - 57063 + | hypothetical protein TERM 73 57599 - 57545 - f 100 -18.5 -5.72118 | opp_overlap 57557 AAAAAATATAAAAAA TATCTTTTCAAACTAAAGAATTATC AAAAA AATATTTCTTTAGTTTGAAAAGATA TGAAATTATCAACTT TERM 74 58087 - 58075 - g 86 -6.3 -5.37171 | AACATCAAAGAAAAA GCATT AGA AATGC ATGAAAAAAATAAAG TERM 75 58772 - 58756 - g 84 -3.8 -5.76949 | GAGCCTCAAAAAAAA TTAGTT GAAGT AACTAA TAAATATCAAGAAAA sfcA 58057 - 59229 + | NAD-dependent malic enzyme TERM 76 59608 - 59623 + G 72 -6.2 -4.40572 | AAGATGGTTCTATTT TTTTGC AAAT GCAAAA TTTTATGAGAATTAT citS 59226 - 60761 + | malate-sodium symport TERM 77 60887 - 60864 - f 77 -8.4 -3.65902 | GTGATTTGATTGAAA TTATTTTTAC CAAC GTAAAAATAA CTAACATATTTATAT pgsA 61363 - 62010 + | CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase TERM 78 62882 - 62828 - T 72 -2.8 -5.72207 | gap 3, opp_overlap 62844, overlap 62844 CTTAAATTAAAAAAA GATATAATATAAGAAATAAGCTAGCTT AAAT AAGCTAGCTTATTT--TATATTAT-TA AGTTGTTATTTTTTT TERM 79 62869 - 62844 - T 100 -13.5 -4.50257 | opp_overlap 62844, overlap 62828 ATATAATATAAGAAA TAAGCTAGCTT AAAT AAGCTAGCTTA TTTTATATTATTAAG TERM 80 62844 - 62869 + T 100 -13.5 -4.79752 | opp_overlap 62844 62828 ATATAATATAAGAAA TAAGCTAGCTT AAAT AAGCTAGCTTA TTTTATATTATTAAG srmB 64539 - 62896 - | superfamily II DNA/RNA helicase TERM 81 65088 - 65068 - R 100 -10.5 -6.12328 | opp_overlap 65068 ATAATATAAAAAAAA GACTCTCAT TGG ATGAGAGCC TTTATAGATTTGGAT TERM 82 65068 - 65088 + r 77 -8.3 -4.02534 | opp_overlap 65068 ATAATATAAAAAAAA GACTCTCAT TGG ATGAGAGCC TTTATAGATTTGGAT AYWB_055 65735 - 65103 - | hypothetical protein TERM 83 65988 - 66005 + H 74 -3.5 -5.67283 | GTTAATTGAGTTCTT TGTTGTA TATT TATAACA TTTTTTCTTTAAATT AYWB_056 66913 - 67083 + | hypothetical protein AYWB_057 67355 - 67507 + | hypothetical protein TERM 84 68031 - 68018 - T 73 -3.9 -5.44198 | AATAAATAATAAAAA TTAGA TATC TCTAA GAAAAAATTACTATT AYWB_058 68323 - 68141 - | hypothetical protein hrcA 68483 - 69517 + | heat-inducible transcription repressor TERM 85 69665 - 69654 - f 71 -3 -5.62288 | TCAACAAAATAAAAA CATA ATTA TATG AAGAAAGAAAAGAGG TERM 86 69986 - 69974 - gf 95 -3.4 -6.36459 | opp_overlap 69974 69974 CCCAACAAAAAAAAA CCTT TGATG AAGG GTTGTTAAAAAATCA grpE 69688 - 70413 + | molecular chaperone GrpE protein TERM 87 71723 - 71703 - gf 71 -8.3 -3.15147 | opp_overlap 71703, overlap 71699 71697 TCCAATTAACAGATA TTCCACCAG CAC CTCGTGGAA TTCCTCAAATTGAAG TERM 88 71703 - 71723 + GF 71 -8.3 -3.18681 | opp_overlap 71703 71699 71697 TCCAATTAACAGATA TTCCACCAG CAC CTCGTGGAA TTCCTCAAATTGAAG TERM 89 71973 - 71963 - gf 74 -4 -5.21709 | opp_overlap 71963, overlap 71944 TTCCACACTAAAAAA TCTT TAG AAGA TTTAAAAGCAGACGT dnaK 70379 - 72226 + | molecular chaperone DnaK TERM 90 72315 - 72335 + F 81 -6.8 -4.89477 | opp_overlap 72315 72306 72303 72319 AAAGAATAATGAAAT CAAAGGGG CAAAA CCCCTTAG TTTTATTATTAGGAG TERM 91 72331 - 72319 - f 76 -6.9 -4.17109 | opp_overlap 72315, overlap 72315 72306 72303 AATAATGAAATCAAA GGGGC AAA ACCCC TTAGTTTTATTATTA TERM 92 72468 - 72456 - g 74 -4.9 -5.00884 | opp_overlap 72456 ATTCTTGCTAAAAAA TATCA TCC TGATA TTTCCAAAGAAGCTA TERM 93 72708 - 72690 - g 73 -3.2 -5.46129 | overlap 72683 CAACAAACTAAAAAA CCTTCTTA TGA TAAAAAAG TAGAGATGACTATTG TERM 94 73260 - 73249 - g 72 -5.8 -4.60889 | opp_overlap 73249 AAGTAGCTTTAAAAA TCCC TTCA GGGA TTCAATCAGGAAATA dnaJ 72363 - 73430 + | molecular chaperone DnaJ TERM 95 73460 - 73491 + F 70 -8.2 -3.11459 | opp_overlap 73457 73466 73468, overlap 73468 TAAATAATAAAATAA TAAGGAGACCAACT TAAA AGTTGGTTTTTTTA TTAAGTGGTAATATT TERM 96 73468 - 73483 + F 100 -7.6 -5.8187 | opp_overlap 73468 73466 73457, overlap 73460 AAAATAATAAGGAGA CCAACT TAAA AGTTGG TTTTTTTATTAAGTG TERM 97 73632 - 73657 + F 74 -5.7 -4.81163 | gap 1, opp_overlap 73632 73640, overlap 73640 TGTTATAATTAATAG TAGATAAATAGT TTT ACTATTT-TCTA TTTTATTAATATTTA AYWB_063 73810 - 73962 + | hypothetical protein TERM 98 74528 - 74506 - f 88 -10.8 -3.74347 | opp_overlap 74506, overlap 74512 TTTATAAATTTGAAA CAGAAATTAA TTT TTAATTTCTG TTTTTTTTTTTTTTG TERM 99 74506 - 74528 + F 100 -10.8 -7.07835 | opp_overlap 74506 74512 TTTATAAATTTGAAA CAGAAATTAA TTT TTAATTTCTG TTTTTTTTTTTTTTG ftsY 74815 - 75885 + | signal recognition particle, docking protein FtsY TERM 100 75927 - 75915 - f 83 -3.5 -6.28401 | GAAAAAACAAAAAAA TTTTA TTA TAAAA AAAAATAAACCCCAC ffh 75981 - 77351 + | signal recognition particle, subunit FFH/SRP54 TERM 101 77376 - 77358 - f 75 -6.2 -4.65969 | AATAAATAATTAAAA TTATAAAA TCT TTTTATAA ACACAATAAAATAAA TERM 102 77418 - 77437 + F 100 -8 -5.63374 | opp_overlap 77422 AATCTTGTATTCTAA GAAAGTTT TTCC AAACTTTC TTTTTTTAATATTAC TERM 103 78802 - 78812 + G 72 -6.8 -4.12188 | opp_overlap 78801 CATTTTTTTATAGAT GCCA ATT TGGC TTTTGCCAATAATAA TERM 104 79595 - 79581 - g 100 -3.6 -6.55664 | CAAAATAAAAAAAAA TCATCT TTT AAATGA TGAACAAACATTACA TERM 105 79959 - 79946 - g 74 -2.4 -5.60864 | opp_overlap 79946 TAGACATGAAAAAAA TTGC CATATT GCAA TTATTGCGCCATTTA polA 77554 - 80097 + | DNA polymerase I nei 80198 - 81028 + | formamidopyrimidine-DNA glycosylase TERM 106 81028 - 81004 - f 71 -6.6 -4.09685 | opp_overlap 81004 TCCTATTTGTCAAAA TCATAATTCC AATAA AGAATTATGA TTGATTTATTTTCAA dnaB 81084 - 82277 + | replication initiation and membrane attachment protein dnaC 82362 - 83180 + | DNA replication protein DnaC TERM 107 83710 - 83725 + T 79 -4.8 -5.59564 | opp_overlap 83710, overlap 83695 83702 83701 TTTTAGTTTAAAAAA CTTTTT AATT AAAAAG TTTTTTTAGATTTGT TERM 108 83725 - 83710 - T 70 -4.8 -5.0538 | opp_overlap 83695 83710 83702 83701 TTTTAGTTTAAAAAA CTTTTT AATT AAAAAG TTTTTTTAGATTTGT cspC 84185 - 83961 - | cold shock protein TERM 109 84668 - 84699 + H 100 -14.8 -4.70515 | opp_overlap 84668 84673, overlap 84673 CTATTATAGATATTA TAAAAGCAAACTTT AATT AAAGTTTGCTTTTA TTTATTTTAAGTATA TERM 110 84699 - 84668 - H 100 -14.8 -2.73771 | opp_overlap 84668 84673, overlap 84673 CTATTATAGATATTA TAAAAGCAAACTTT AATT AAAGTTTGCTTTTA TTTATTTTAAGTATA TERM 111 84694 - 84673 - H 89 -10.3 -4.53765 | opp_overlap 84668 84673, overlap 84668 ATAGATATTATAAAA GCAAACTTT AATT AAAGTTTGC TTTTATTTATTTTAA TERM 112 84673 - 84694 + H 100 -10.3 -5.26247 | opp_overlap 84673 84668, overlap 84668 ATAGATATTATAAAA GCAAACTTT AATT AAAGTTTGC TTTTATTTATTTTAA AYWB_071 84902 - 85183 + | fragment of ATP-dependent Zn protease AYWB_072 85274 - 85663 + | hypothetical protein AYWB_073 85667 - 86227 + | hypothetical protein TERM 113 86811 - 86829 + F 76 -3.8 -5.71712 | TTAAAATACAACTAA GACCTTTA AAT TTGAGGTC TTTTTTTATATCCAA TERM 114 87099 - 87117 + F 100 -6.7 -5.60993 | opp_overlap 87099 ATAAATCTTAATTAA GGCTCTC ATCAC GAGAGTC TTTTTTTATACCCAA tmk 87154 - 87786 + | thymidylate kinase TERM 115 87922 - 87906 - f 81 -6.6 -4.7416 | opp_overlap 87906 TTAAAACCCTAAAAA GACTCT AATTA AGAGTC TTTTTTTTATTTAGA TERM 116 87906 - 87922 + F 100 -6.6 -6.23545 | opp_overlap 87906 TTAAAACCCTAAAAA GACTCT AATTA AGAGTC TTTTTTTTATTTAGA AYWB_075 87953 - 88351 + | hypothetical protein AYWB_076 88585 - 88767 + | hypothetical protein AYWB_077 89099 - 89359 + | hypothetical protein AYWB_078 89573 - 89872 + | hypothetical protein AYWB_079 90083 - 90235 + | hypothetical protein TERM 117 90394 - 90375 - f 91 -5 -6.17184 | opp_overlap 90377, overlap 90377 ACCATTAAAAAAAAA TACCAACT TTTA AGTTGGTT TCCTTATTGTTTCTA TERM 118 90392 - 90377 - f 81 -7.6 -4.72643 | opp_overlap 90377, overlap 90375 CATTAAAAAAAAATA CCAACT TTTA AGTTGG TTTCCTTATTGTTTC TERM 119 90377 - 90392 + F 78 -7.6 -4.17355 | opp_overlap 90377 90375 CATTAAAAAAAAATA CCAACT TTTA AGTTGG TTTCCTTATTGTTTC AYWB_080 90460 - 90624 + | hypothetical protein TERM 120 90785 - 90755 - f 100 -15.8 -3.7829 | opp_overlap 90750 90761, overlap 90758 ATTACATGGATTAAA TAATGAGTGTTTTT TTA AAAAACACTCATTA AGGGATAATATATTA TERM 121 90782 - 90758 - f 100 -13.1 -4.01902 | opp_overlap 90750 90761, overlap 90755 ACATGGATTAAATAA TGAGTGTTTTT TTA AAAAACACTCA TTAAGGGATAATATA TERM 122 90761 - 90779 + F 73 -9 -2.7185 | opp_overlap 90758 90755, overlap 90750 TGGATTAAATAATGA GTGTTTTT TTA AAAAACAC TCATTAAGGGATAAT AYWB_081 90834 - 91145 + | hypothetical protein TERM 123 91776 - 91746 - gf 77 -2 -5.79588 | TTAAAATTAAAAAAA CAATTAAATAATAT AAA AAATCCTTTAATTG CGGAATCTATTGATG AYWB_082 91341 - 91811 + | hypothetical protein TERM 124 92047 - 92068 + GF 74 -3.9 -5.20606 | AGTTCATTGTTTGAT TTTTTAATG AAAA TATTAAAAA TTTTTATTGATGTTT AYWB_083 91774 - 92448 + | hypothetical protein TERM 125 93496 - 93484 - g 75 -3.5 -5.44119 | TTGATGGTAAAAAAA TTAAT TTT ATTAA AGAATACGATCCAAC AYWB_084 92481 - 93659 + | hypothetical protein TERM 126 93764 - 93793 + F 86 -6.5 -5.1523 | gap 1, opp_overlap 93772 93773, overlap 93773 AACTATTACCCCCCT CCTATAAAGTCCCC TCT GGGGA-TTTAGGGG TTTTTATATTATAAA TERM 127 93785 - 93773 - f 74 -9.1 -2.91276 | opp_overlap 93764 93773, overlap 93772 CCCCCTCCTATAAAG TCCCC TCT GGGGA TTTAGGGGTTTTTAT TERM 128 93773 - 93785 + F 80 -9.1 -3.69455 | opp_overlap 93773 93772, overlap 93764 CCCCCTCCTATAAAG TCCCC TCT GGGGA TTTAGGGGTTTTTAT TERM 129 94011 - 94048 + G 87 -11.6 -2.52676 | opp_overlap 94008 94023, overlap 94023 TATGATAAATTATTT TCATCATTAAAAGAAG ATTATC CTTCTTATAATGATGA TGAATTAGAAAAATA TERM 130 94413 - 94395 - g 77 -6.2 -4.77036 | opp_overlap 94395 94400, overlap 94400 TTGTATTATGAAAAA TTAAATTA TTA TAATTTAA TAACTTTTGATGGTT TERM 131 96512 - 96527 + G 70 -6.2 -4.17355 | TTCTCGTACATGTTT TTCTTG TCCT CAAGAA TCTTTTTTAGCATTA uvrD 93819 - 96935 + | UvrD helicase TERM 132 96936 - 96960 + F 95 -6 -5.66868 | opp_overlap 96941 96956, overlap 96956 CAACTTTCTCCTTAA TTTAATTTAA TTAGT TTAAATTAAA TTTTTTTAATTAATT TERM 133 96978 - 96998 + F 86 -8.3 -4.89477 | TTTTTAATTAATTTT GCTGTCTAA TTA TTGGACGGC TTTTGTTGTTGGAAA TERM 134 97033 - 97018 - f 71 -3.4 -5.40072 | opp_overlap 97018, overlap 97030 GTTGTTGGAAAAAAA TAAATA AAAT TATTTA TAAATTACAAAAACT TERM 135 97596 - 97574 - gf 71 -7.9 -3.19808 | overlap 97572 AAAATTAATTGAATA TGGTTTTAT TAAAG ATAAAACCA ATCAACAAAATAAAA AYWB_086 97131 - 97658 + | hypothetical protein AYWB_087 97633 - 97992 + | hypothetical protein TERM 136 98444 - 98407 - f 100 -6.6 -6.37666 | gap 1, opp_overlap 98417, overlap 98414 98417 ATAAAACAAAAAAAA TAATAAATAAGACTCTC GTAAT GAGAGTCTT-TTTTTTA TTATTCAAAATGAAA TERM 137 98438 - 98414 - f 82 -7.2 -4.92655 | opp_overlap 98417, overlap 98407 98417 AAAAAAAATAATAAA TAAGACTCTC GTAAT GAGAGTCTTT TTTTTATTATTCAAA TERM 138 98417 - 98435 + F 100 -9.6 -6.22691 | opp_overlap 98414 98407 98417 AAAAATAATAAATAA GACTCTCG TAA TGAGAGTC TTTTTTTTATTATTC TERM 139 98435 - 98417 - f 86 -8.9 -4.44151 | opp_overlap 98417, overlap 98414 98407 AAAAATAATAAATAA GACTCTC GTAAT GAGAGTC TTTTTTTTATTATTC AYWB_088 99727 - 99966 + | hypothetical protein TERM 140 100281 - 100256 - f 70 -7.1 -3.70741 | overlap 100254 AAAGTCCAACAAACA CTAACTAAAAA AGTT TTTTTAATTAG CATGTCGAGAAAAGC AYWB_089 100283 - 100459 + | hypothetical protein TERM 141 100880 - 100848 - T 90 -8.5 -4.87803 | opp_overlap 100854 100879, overlap 100852 100853 100854 TATCTCCAAACAAAA CAAACCCCCCCTTTT TAT AAAAGGGGGTTTTTA ATATAATATTATAAT TERM 142 100874 - 100852 - T 86 -7.7 -4.96996 | opp_overlap 100854, overlap 100848 100853 100854 TCCAAACAAAACAAA CCCCCCCTT TTTAT AAAAGGGGG TTTTTAATATAATAT TERM 143 100874 - 100853 - T 87 -10.9 -3.56571 | opp_overlap 100854, overlap 100852 100848 100854 CCAAACAAAACAAAC CCCCCCTTT TTAT AAAAGGGGG TTTTTAATATAATAT TERM 144 100854 - 100874 + T 100 -14.1 -4.83269 | opp_overlap 100852 100853 100848 100854 CAAACAAAACAAACC CCCCCTTTT TAT AAAAGGGGG TTTTTAATATAATAT TERM 145 100874 - 100854 - T 100 -14.1 -2.72316 | opp_overlap 100854, overlap 100852 100853 100848 CAAACAAAACAAACC CCCCCTTTT TAT AAAAGGGGG TTTTTAATATAATAT AYWB_090 102756 - 101041 - | kinase related to dihydroxyacetone kinase TERM 146 101862 - 101874 + g 74 -4.9 -5.0809 | opp_overlap 101862 101860 TGCCGTAAGTTAAGA GTTTT TCT AAAAC TTTTTCTGGTTTGTT TERM 147 102105 - 102117 + g 82 -2.7 -5.9873 | overlap 102106 TTTGTTTATTTTGGT TTACT TGA AGTAG TTTTTTTTCTCGTAA TERM 148 102368 - 102378 + g 80 -5.4 -5.26316 | TGAGGTTCTATAATG GCTT GGT AAGC TTTTTTGTAACCTCC TERM 149 103169 - 103154 - H 71 -3.4 -5.40072 | opp_overlap 103154, overlap 103166 GTTGTTGGAAAAAAA TAAATA AAAT TATTTA TAAATTACAAAAACT TERM 150 103969 - 103955 - g 75 -5.8 -4.7261 | ATCCATTAAAAGAAA TTTTAG TTA CTAAAA AAGTTATAGAAAAAA AYWB_091 103777 - 104097 + | hypothetical protein TERM 151 104250 - 104230 - T 78 -7.7 -4.20136 | ACTCCGAAAATTAAA GTTTATTTG CCT CAAACAAAC AATAAAGTAGCTGAT TERM 152 104425 - 104440 + T 75 -4 -5.63374 | opp_overlap 104419, overlap 104417 ATATATAAAGAAAAA CCAATT TAAA AGTTGG TTTTTTTAATATTAA potD 105713 - 104499 - | spermidine/putrescine-binding protein potC 106622 - 105732 - | ABC-type spermidine/putrescine transport system, permease protein PotC potB 107460 - 106612 - | ABC-type spermidine/putrescine transport system, permease protein PotB potA 108707 - 107454 - | ABC-type spermidine/putrescine transport, ATP-binding protein PotA TERM 153 108751 - 108735 - H 77 -6.7 -4.56775 | opp_overlap 108735 108741 108742, overlap 108741 ATCTTTTTGGAAAAA TAAAGTT TTA AACTTTA TAAGTTTAAGTTGTA TERM 154 110491 - 110501 + G 71 -4 -5.01497 | GAGGACAAGCAGGGG GATA TAC TATC TTTTTGTCTGCTAGT hflB 109287 - 111041 + | ATP-dependent zinc metallopeptidase FtsH TERM 155 111039 - 111070 + F 70 -4.5 -5.04868 | opp_overlap 111046, overlap 111046 TTTAGACAAAGACCT TAATAAACCCTTC TTAATT GATGGGTTTTTTA TTTTATTTACTTTAA TERM 156 111046 - 111063 + F 75 -2.6 -5.95449 | opp_overlap 111046, overlap 111039 AAAGACCTTAATAAA CCCTTC TTAATT GATGGG TTTTTTATTTTATTT TERM 157 111156 - 111146 - f 72 -2.6 -5.76949 | opp_overlap 111146 111152 TATTTGCAAAAAAAA TTAT TGT ATAA TATATATTAATAAAT TERM 158 111496 - 111480 - f 76 -5.1 -5.17786 | opp_overlap 111480 111478 TAACAAAACTAAAAA GCCATTT ATT AATTGGC TATTTTTATAACATT TERM 159 112089 - 112111 + F 70 -5 -4.83169 | CTGCGCTGTTACGTT TTTTAGACAA TTT TTCTCTAAAA TTTTTCTAAAAACGT AYWB_097 113107 - 113274 + | hypothetical protein TERM 160 114004 - 114046 + F 73 -5.2 -5.06451 | opp_overlap 114006 114016 114045, overlap 114017 TTTCCTTCTGGCTAA TATTTTTTAATATTCAAAAT TTG ATTTTGACTCTTATAAAATA TTTTTTAACCTAATA TERM 161 114147 - 114163 + F 71 -3.7 -5.51078 | opp_overlap 114147, overlap 114147 114144 114149 TTTTATTGAATTTAA TTGCAAT GCA ATTGCTA TTTTATTTTTATTTT TERM 162 114149 - 114161 + F 71 -6.3 -4.3115 | opp_overlap 114147, overlap 114147 114144 114147 TTATTGAATTTAATT GCAAT GCA ATTGC TATTTTATTTTTATT TERM 163 114232 - 114218 - f 71 -5.7 -4.65182 | GATAAATTAAATAAA TGCGA AATTA TCGCA TCCAAATTTGGCTTT TERM 164 114293 - 114281 - f 71 -3.5 -5.40004 | GACCAAACGAAAAAA TATTT ACT AAATA ATTCAACAATTCCAA AYWB_098 114437 - 116161 + | Zn-dependent hydrolase TERM 165 117186 - 117160 - g 70 -3 -5.26875 | overlap 117173 CCCTGAATTAAAAAA TGAGTTTCAACA AGT TTTAGAAACCCA ATTAGGCTTAAAAAA degV 116435 - 117298 + | DegV family protein TERM 166 118034 - 118078 + T 80 -8.9 -3.68024 | opp_overlap 118039, overlap 118039 ACAAAACTATAAACT AAAAAGTTAAACCGCTTAT CTCATCA ATAAACGGTTTAACTTTTA TTATATATTAACACA TERM 167 118039 - 118073 + T 90 -8.8 -4.90002 | opp_overlap 118039, overlap 118034 ACTATAAACTAAAAA GTTAAACCGCTTAT CTCATCA ATAAACGGTTTAAC TTTTATTATATATTA TERM 168 118073 - 118039 - T 100 -11.7 -5.05505 | opp_overlap 118039 118034 ACTATAAACTAAAAA GTTAAACCGCTTATC TCATC AATAAACGGTTTAAC TTTTATTATATATTA TERM 169 118121 - 118103 - T 100 -8.2 -5.94214 | opp_overlap 118103 118102 AACACAACAAAAAAA CTGCAACA ATT TATTGCAG ATTTTTTAAACTATT cof 118953 - 118135 - | HAD family hydrolase TERM 170 119024 - 119047 + H 71 -6.9 -3.78879 | opp_overlap 119019, overlap 119038 AAATATCAATTTTAT GCAATAATT AATTAC AATTATTGC TTATATTATACTATA AYWB_101 119147 - 120838 + | metallo-beta-lactamase superfamily hydrolase AYWB_102 121446 - 121213 - | hypothetical protein TERM 171 121646 - 121659 + H 78 -3.9 -5.86609 | CGATTAATTTATTAC GAATT TCTA AATTC TTTTTATTTTTTTAA TERM 172 121937 - 121961 + H 100 -8.1 -6.02914 | opp_overlap 121937 ATTTTCAATTAAAAA TTAGAATGTTT TTC AAATATTCTAA TTTTTTTTATATAAA TERM 173 121961 - 121937 - H 78 -5.9 -4.86621 | opp_overlap 121937 ATTTTCAATTAAAAA TTAGAATGTTT TTC AAATATTCTAA TTTTTTTTATATAAA rnhC 122118 - 123110 + | ribonuclease HIII hit 123128 - 123595 + | asymmetrical bis(5'-nucleosyl)-tetraphosphatase AYWB_105 123735 - 123908 + | hypothetical protein TERM 174 124165 - 124191 + T 75 -6 -4.59773 | opp_overlap 124165, overlap 124168 CATTTTGCTAATAAT TGTTTTTTTGGA ATA TTCAAAAAATCA TTTTTCAAGATAAAA TERM 175 124880 - 124859 - T 100 -8.1 -5.88565 | opp_overlap 124859 TTTATAATAAAAAAA CCAAACTAT TTTA ATAGCTTGG TTTAATCATAGATGT AYWB_106 125356 - 124913 - | hypothetical protein rpoD 126755 - 125358 - | RNA polymerase sigma factor RpoD TERM 176 126320 - 126334 + g 70 -2.9 -5.28683 | opp_overlap 126320, overlap 126331 AATGGATTTTAGAAA TTTCT TCTTT AGAAA TTTTTTCATCTTCAT dnaG 128650 - 126836 - | DNA primase grs1 130018 - 128660 - | glycyl-tRNA synthetase era 131015 - 130128 - | GTP-binding protein Era TERM 177 130765 - 130783 + g 76 -4.6 -5.28481 | overlap 130782 ACGTCTTTGATGCTT TGAAAAAC GAT GTTGTTCA TTTTTTGGTTCAATA AYWB_111 131552 - 131112 - | metal-dependent hydrolase TERM 178 131142 - 131152 + g 71 -2.6 -5.55769 | TAAATTGAGACCTAC TTTT TGT AAAA TTTTTTCTTGTAAAG TERM 179 131714 - 131732 + r 80 -7.4 -4.4959 | opp_overlap 131714, overlap 131709 ATAAAATAAAAAAAA GCAACTTG TTT CAAGTAGC TTTTAATTGATTAAA TERM 180 131732 - 131714 - R 100 -7.4 -6.37666 | opp_overlap 131714 131709 ATAAAATAAAAAAAA GCAACTTG TTT CAAGTAGC TTTTAATTGATTAAA rpsU 131924 - 131751 - | 30S ribosomal protein S21 TERM 181 131972 - 132027 + r 93 -12.6 -3.2655 | gap 1, opp_overlap 131972 AATTACCAATACTAA TTATATTGTATCTCTTTTT-TTGTT TTTTGTC AATAATAAAAAGAGATACAATATAA TTAAATATTTACTTA TERM 182 132027 - 131972 - R 86 -10.4 -3.40565 | gap 1, opp_overlap 131972 AATTACCAATACTAA TTATATTGTATCTCTTTTT-TTGTT TTTTGTC AATAATAAAAAGAGATACAATATAA TTAAATATTTACTTA AYWB_113 132738 - 132166 - | hypothetical protein AYWB_114 132961 - 132749 - | hypothetical protein uvrD 135356 - 133071 - | UvrD helicase TERM 183 134239 - 134253 + g 77 -6.4 -4.68446 | opp_overlap 134239, overlap 134231 TGATAGCTATAAACA CCTTGT AAA ACGAGG TTTTGTATCGTTTTT TERM 184 135068 - 135089 + g 86 -5.9 -5.41941 | TGCCTTTGGTTTTTT CTTTACCAA TCAT TTGGTCAAG TTTTTCTTTCATTTG TERM 185 135145 - 135155 + g 100 -5.4 -6.11243 | AGGGCTAAAATTTGG TTGC TTG GCAA TTTTTTTTGTTCGAT TERM 186 135291 - 135309 + g 71 -4 -5.06414 | opp_overlap 135294 135308, overlap 135295 135308 ATTCAAGGGTTTATT TAATTTTT CTA AAAAATTG TTTTTATTGGAAAAC glnS 137100 - 135433 - | glutaminyl-tRNA synthetase TERM 187 137812 - 137782 - H 79 -8.6 -3.77722 | overlap 137798 137803 CTTAATTAGTAATAA TTTTTTAAAGTATA AAT TAAACTTTAAAAAA GAGTTAAAAAATATT TERM 188 138335 - 138283 - H 70 -5.1 -4.88485 | opp_overlap 138296 138327, overlap 138292 138296 138299 TAATTAAAAAAATAA TGAAAATAATTAACAAGATCAACTT ATA AAGTTGATCTTGTTTTGTTTTTTTA AAAAAATATAAAAAA TERM 189 138326 - 138292 - H 89 -10.2 -4.39448 | opp_overlap 138296, overlap 138283 138296 138299 AAATAATGAAAATAA TTAACAAGATCAACTT ATA AAGTTGATCTTGTTTT GTTTTTTTAAAAAAA TERM 190 138296 - 138322 + H 100 -15.4 -5.55855 | opp_overlap 138292 138283 138296 138299 AATGAAAATAATTAA CAAGATCAACTT ATA AAGTTGATCTTG TTTTGTTTTTTTAAA TERM 191 138322 - 138296 - H 100 -15.4 -3.71308 | opp_overlap 138296, overlap 138292 138283 138299 AATGAAAATAATTAA CAAGATCAACTT ATA AAGTTGATCTTG TTTTGTTTTTTTAAA TERM 192 138319 - 138299 - H 93 -11.3 -3.95647 | opp_overlap 138296, overlap 138296 138292 138283 GAAAATAATTAACAA GATCAACTT ATA AAGTTGATC TTGTTTTGTTTTTTT TERM 193 139854 - 139840 - g 80 -8.6 -3.95725 | opp_overlap 139839 AATTTCCAATAATAA TCAAGC ATT GCTTGA ATTAGATGAAACAAA dnaX 138695 - 140656 + | DNA polymerase III, gamma/tau subunit AYWB_118 140669 - 140953 + | hypothetical protein TERM 194 141064 - 141045 - g 78 -5.8 -4.94243 | overlap 141046 TGAAAAAAACCAAAA CTCCAAAA TCAC TTTTGGAA ACGGCTTATGACATT AYWB_119 141029 - 141538 + | hypothetical protein pssA 141714 - 142448 + | CDP-diacylglycerol-serine O-phosphatidyltransferase TERM 195 142561 - 142550 - gf 77 -3 -5.68039 | overlap 142551 142552 AAACTTAGAAAAAAA CTTT TGGA AAAG ACTCCTTCTCAAAAT psd 142461 - 143462 + | phosphatidylserine decarboxylase TERM 196 145024 - 145037 + GF 73 -5.3 -4.63932 | opp_overlap 145019 CCATTAAAACCACAT CCTTT ATTT AAAGG TTTTGTTGAAGCGTC pyrG 143377 - 145065 + | CTP synthetase TERM 197 145084 - 145122 + F 83 -10.6 -3.0976 | opp_overlap 145095, overlap 145095 AAATAAATAATTTAT AAATGAAAAAACTACCTT TTT AAGGTAGTTTTTTTGTTA TATTGAGGTGTTCCA TERM 198 145111 - 145095 - f 100 -9.5 -5.42514 | opp_overlap 145095 145084 TTATAAATGAAAAAA CTACCTT TTT AAGGTAG TTTTTTTGTTATATT TERM 199 145095 - 145111 + F 100 -9.5 -5.94214 | opp_overlap 145095, overlap 145084 TTATAAATGAAAAAA CTACCTT TTT AAGGTAG TTTTTTTGTTATATT TERM 200 145198 - 145178 - f 91 -5.5 -5.88476 | opp_overlap 145178 AAAAGAAATAAAAAA GATCAACTT AAA AATTTGATC TTAATTGTTATTTTT AYWB_123 145203 - 145388 + | hypothetical protein AYWB_124 145769 - 145930 + | hypothetical protein artM 147675 - 145966 - | ABC transporter extracellular solute-binding protein TERM 201 147125 - 147160 + g 95 -10.8 -3.99324 | opp_overlap 147131 147134, overlap 147131 TTATTAATTTGTTTT TTAAAATAATCCTTAT CAAA ATAAGGATTATTTTTA TTTATAATAATAAAA TERM 202 147131 - 147154 + g 100 -9.8 -5.40464 | opp_overlap 147131 147134, overlap 147125 ATTTGTTTTTTAAAA TAATCCTTAT CAAA ATAAGGATTA TTTTTATTTATAATA TERM 203 147154 - 147131 - G 91 -9.8 -4.07687 | opp_overlap 147131 147125, overlap 147134 ATTTGTTTTTTAAAA TAATCCTTAT CAAA ATAAGGATTA TTTTTATTTATAATA TERM 204 147151 - 147134 - G 75 -7.1 -4.17048 | opp_overlap 147131 147125, overlap 147131 TGTTTTTTAAAATAA TCCTTAT CAAA ATAAGGA TTATTTTTATTTATA TERM 205 147680 - 147695 + r 70 -7.6 -3.53761 | opp_overlap 147680 CTATAAAACAAAAAA CCTTCT TAAA AGAAGG TTTGAGAGAAACTTG TERM 206 147695 - 147680 - R 100 -7.6 -5.86976 | opp_overlap 147680 CTATAAAACAAAAAA CCTTCT TAAA AGAAGG TTTGAGAGAAACTTG AYWB_126 148293 - 148120 - | hypothetical protein TERM 207 148601 - 148573 - R 89 -6.1 -5.47846 | opp_overlap 148576, overlap 148576 AATGAAAAAAGAAAA TAGGGAGTTATAT ATT ATATCACTCCTTA AATAAGTTAATCTTT TERM 208 149083 - 149064 - R 84 -5 -5.89827 | opp_overlap 149066, overlap 149066 AACCATTAAAAAAAA TACCAACT TTTA AGTTGGTT TCCTTATTGTTTCTA TERM 209 149081 - 149066 - R 81 -7.6 -4.5787 | opp_overlap 149066, overlap 149064 CCATTAAAAAAAATA CCAACT TTTA AGTTGG TTTCCTTATTGTTTC TERM 210 149066 - 149081 + r 78 -7.6 -4.17355 | opp_overlap 149066 149064 CCATTAAAAAAAATA CCAACT TTTA AGTTGG TTTCCTTATTGTTTC AYWB_127 149777 - 149157 - | hypothetical protein lysU 151673 - 153163 + | lysyl-tRNA synthetase dnaE 153277 - 156027 + | DNA polymerase III alpha subunit AYWB_130 156089 - 156286 + | hypothetical protein AYWB_131 156474 - 156316 - | hypothetical protein AYWB_132 156908 - 157261 + | hypothetical protein pheS 157330 - 158361 + | phenylalanyl-tRNA synthetase alpha chain TERM 211 158479 - 158467 - gf 77 -6.3 -4.65895 | CCCCCTATCCAAAAA CACTA ATT TAGTG GTGGGACAAATTCTT pheT 158330 - 160816 + | phenylalanyl-tRNA synthetase beta chain TERM 212 162002 - 161985 - g 84 -3.5 -5.78622 | opp_overlap 161986, overlap 161986 GGAGCCGAAAAAAAA CTTTTTC ATAT GAAAAAA TTACTAGATGAAAAA phnL 161028 - 162779 + | ABC transporter ATP-binding protein TERM 213 162816 - 162793 - f 84 -9.8 -3.81461 | opp_overlap 162793 AAATATTAATTGAAA TACCATATAT TAAA ATATATGGTA TTTTTTTTATCTTAA TERM 214 162793 - 162816 + F 100 -9.8 -6.10295 | opp_overlap 162793 AAATATTAATTGAAA TACCATATAT TAAA ATATATGGTA TTTTTTTTATCTTAA acoA 163006 - 164097 + | pyruvate dehydrogenase E1 component alpha subunit TERM 215 165051 - 165040 - g 73 -4.4 -5.03145 | TAAGCCCTGAAAAAA TAGC TGAT GCTA TTAAAAAAGTGGTTT acoB 164100 - 165074 + | pyruvate dehydrogenase E1 component beta subunit aceF 165266 - 166519 + | branched-chain alpha-keto acid dehydrogenase subunit E2 lpd 166541 - 167914 + | dihydrolipoamide dehydrogenase TERM 216 167958 - 167942 - f 100 -6.6 -5.7946 | opp_overlap 167942 CTTTGAACAAAAAAA GAACCT TTAAT AGGTTC TTTTTCCTTAAATGG TERM 217 167942 - 167958 + F 81 -6.6 -4.88407 | opp_overlap 167942 CTTTGAACAAAAAAA GAACCT TTAAT AGGTTC TTTTTCCTTAAATGG tatD 168348 - 169115 + | Mg-dependent DNase TERM 218 169093 - 169105 + T 79 -3.5 -5.9663 | overlap 169097 169100 ATGTAGCTAAGTTGT TTTTT AAT AAAAA TTTTTTTTAATATTT TERM 219 169116 - 169138 + T 74 -7.9 -3.63805 | opp_overlap 169107 169118 169137, overlap 169097 AAAAATTTTTTTTAA TATTTTTGG TATAT CCAAAAATA TTTGAAATATAAAAT TERM 220 169198 - 169221 + T 70 -5.3 -4.9251 | opp_overlap 169198, overlap 169193 TATATAATAAAAAAA TCAACTCCG CTTATA CGAAGTTGA TTTTACTTTTTTCTT TERM 221 169221 - 169198 - T 100 -8.2 -5.9218 | opp_overlap 169198 169193 TATATAATAAAAAAA TCAACTCCGC TTAT ACGAAGTTGA TTTTACTTTTTTCTT AYWB_141 169546 - 169208 - | hypothetical protein TERM 222 169757 - 169745 - H 74 -3.5 -5.61596 | opp_overlap 169745 ATTTTGATAAAAAAA TTATT TTC AATAA ATTTATCATTAATTT TERM 223 170017 - 170000 - H 70 -4.9 -4.77775 | opp_overlap 170003 ACTTCATAAAATAAA CAACCAA ATTA TTGGTTA TTTCCATTTTTATTT plsX 170186 - 171274 + | putative glycerol-3-phosphate acyltransferase PlsX rnc 171280 - 171993 + | dsRNA-specific ribonuclease AYWB_144 172007 - 172627 + | hypothetical protein TERM 224 172677 - 172694 + F 89 -5.7 -5.66989 | opp_overlap 172680 TCTTTTTATGTGTTA TAATTAC TTAT GTAATTA TTTTTTTAGTATTTC AYWB_145 172755 - 173219 + | hypothetical protein TERM 225 173245 - 173217 - T 100 -14.9 -3.97659 | opp_overlap 173217 173223, overlap 173223 AATAATTTAACTAAA TAAAAATACCCTT TTT AAGGGTATTTTTA TTATCCATATACGCT TERM 226 173217 - 173245 + T 100 -14.9 -3.39505 | opp_overlap 173217 173223, overlap 173223 AATAATTTAACTAAA TAAAAATACCCTT TTT AAGGGTATTTTTA TTATCCATATACGCT TERM 227 173223 - 173239 + T 100 -9.5 -5.20333 | opp_overlap 173223 173217, overlap 173217 TTAACTAAATAAAAA TACCCTT TTT AAGGGTA TTTTTATTATCCATA TERM 228 173239 - 173223 - T 100 -9.5 -5.38326 | opp_overlap 173217 173223, overlap 173217 TTAACTAAATAAAAA TACCCTT TTT AAGGGTA TTTTTATTATCCATA TERM 229 173338 - 173321 - T 70 -4.3 -5.27779 | opp_overlap 173321 TTTAAGACTAAAAAA TTAAATT AGAT AATTTAA TATCTTTTCAAACTA AYWB_146 174529 - 173933 - | hypothetical protein TERM 230 174063 - 174074 + g 81 -3 -5.86965 | ATTGTTTTGCCATCA TCAT AAAA ATGA TTTTTTTTAATAAAT TERM 231 174852 - 174826 - R 100 -8.1 -6.08563 | opp_overlap 174826 174829 AATATATAAAAAAAA TAACTCCCTAA AATAA TAAGGGAGTTA TATAATAGTTAAAAT AYWB_147 175303 - 174887 - | hypothetical protein AYWB_148 175810 - 176502 + | hypothetical protein TERM 232 176717 - 176697 - g 73 -9.1 -2.51535 | opp_overlap 176709 176712, overlap 176696 176699 TAGTTAAAGATATAG CAGTTGTAA CTC TCACAACTG GCGCAGTTGTAATTG TERM 233 176712 - 176726 + G 71 -8.6 -2.88731 | opp_overlap 176699 176697 176696, overlap 176709 CAGTTGTAACTCTCA CAACTG GCG CAGTTG TAATTGGTTGTCTAG AYWB_149 176576 - 176803 + | hypothetical protein ssb 176828 - 177142 + | single-stranded DNA binding protein TERM 234 177174 - 177145 - f 76 -5 -5.13648 | opp_overlap 177150, overlap 177149 177150 TAAAGATAAATAAAA TAAAGGCCCCTA TTAAAT TAGGGGCTTATA CAAGAAAGAGTTTAT TERM 235 177170 - 177149 - f 77 -5.8 -5.00611 | opp_overlap 177150, overlap 177145 177150 GATAAATAAAATAAA GGCCCCTA TTAAAT TAGGGGCT TATACAAGAAAGAGT TERM 236 177150 - 177169 + F 76 -9.3 -3.28712 | opp_overlap 177150 177149 177145 ATAAATAAAATAAAG GCCCCTA TTAAAT TAGGGGC TTATACAAGAAAGAG TERM 237 177169 - 177150 - f 80 -9.3 -3.57927 | opp_overlap 177150, overlap 177149 177145 ATAAATAAAATAAAG GCCCCTA TTAAAT TAGGGGC TTATACAAGAAAGAG AYWB_151 177293 - 177760 + | hypothetical protein TERM 238 177918 - 177940 + F 95 -13.6 -3.08015 | opp_overlap 177911 177909 177922, overlap 177922 ATTGAAGAGTTTTAG TAAACTCGGT AAA ACCGAGTTTA TATTAAGCTACTTAA TERM 239 177922 - 177936 + F 89 -10 -4.20368 | opp_overlap 177909 177922, overlap 177918 AAGAGTTTTAGTAAA CTCGGT AAA ACCGAG TTTATATTAAGCTAC TERM 240 177936 - 177922 - f 85 -10 -3.74519 | opp_overlap 177918 177922, overlap 177909 AAGAGTTTTAGTAAA CTCGGT AAA ACCGAG TTTATATTAAGCTAC AYWB_152 178414 - 178599 + | hypothetical protein TERM 241 178785 - 178758 - f 71 -2.2 -5.81622 | ATAAAATGAAAAAAA TTATTAATATTT TAGA AAACAATAATAA AAATTTAGAAGCTGA TERM 242 179077 - 179106 + F 100 -6.5 -5.71712 | gap 1, opp_overlap 179085 179086, overlap 179086 ATCTATTACACCCCT CCTATAAAGTCCCC TCT GGGGA-TTTAGGGG TTTTTTTATATAAAA TERM 243 179098 - 179086 - f 74 -9.1 -2.91395 | opp_overlap 179077 179086, overlap 179085 ACCCCTCCTATAAAG TCCCC TCT GGGGA TTTAGGGGTTTTTTT TERM 244 179086 - 179098 + F 80 -9.1 -3.71363 | opp_overlap 179086 179085, overlap 179077 ACCCCTCCTATAAAG TCCCC TCT GGGGA TTTAGGGGTTTTTTT AYWB_153 179144 - 179446 + | hypothetical protein TERM 245 179454 - 179425 - T 83 -6.7 -4.96435 | opp_overlap 179433, overlap 179433 TCAACAAAAAAATAA TAAAAAAATCAAA AATA TTTGATTTTTTAA AAGGAACAAAAGATA TERM 246 179446 - 179433 - T 81 -3.9 -6.04419 | opp_overlap 179433, overlap 179425 AAAATAATAAAAAAA TCAAA AATA TTTGA TTTTTTAAAAGGAAC TERM 247 179742 - 179755 + T 79 -2.5 -6.12458 | CCTTTATTTTTGATA TATTT TAAT AAATA TTTTTTCTTTTTTTG AYWB_154 180746 - 180567 - | hypothetical protein TERM 248 180901 - 180883 - R 73 -3.9 -5.37043 | gap 1, opp_overlap 180883 ATTGGATATAAAAAA GACC-TCA AATT TGAAGGTC TTAGTTGTATTTTAA AYWB_155 181578 - 181003 - | hypothetical protein TERM 249 181836 - 181795 - H 100 -17.6 -3.91911 | opp_overlap 181799, overlap 181796 CTTATTTTAACGAAA GTGAGGTGTTCCAAAAGT GTCTAA ACTTTTGGAACACCTCAT TCCGACCAAGGAACA TERM 250 181835 - 181796 - H 100 -21.1 -2.94825 | opp_overlap 181799, overlap 181795 TTATTTTAACGAAAG TGAGGTGTTCCAAAAGT GTCTAA ACTTTTGGAACACCTCA TTCCGACCAAGGAAC TERM 251 181799 - 181832 + H 100 -17 -2.70932 | opp_overlap 181796 181795 TTTTAACGAAAGTGA GGTGTTCCAAAAGT GTCTAA ACTTTTGGAACACC TCATTCCGACCAAGG AYWB_156 181947 - 182129 + | hypothetical protein TERM 252 182109 - 182131 + F 79 -2.8 -6.23545 | TCATCACCTTCTCAA TATTGTCAAA ATT TTAGATAATA TTTTTTTTATTTCAA TERM 253 182216 - 182197 - f 93 -5 -6.41805 | opp_overlap 182199, overlap 182199 CCATTAAAAAAAAAA TACCAACT TTTA AGTTGGTT TCCTTATTGTTTCTA TERM 254 182199 - 182214 + F 78 -7.6 -4.17355 | opp_overlap 182197 182199 ATTAAAAAAAAAATA CCAACT TTTA AGTTGG TTTCCTTATTGTTTC TERM 255 182214 - 182199 - f 84 -7.6 -4.84718 | opp_overlap 182199, overlap 182197 ATTAAAAAAAAAATA CCAACT TTTA AGTTGG TTTCCTTATTGTTTC AYWB_157 182280 - 182444 + | hypothetical protein TERM 256 182605 - 182574 - f 100 -14.8 -3.7829 | opp_overlap 182580, overlap 182577 ATTACATGGATTAAA TAATGAGTGTTTTT TTAA AAAAACACTCATTA AGGGATAATATATGA TERM 257 182602 - 182577 - f 100 -12.1 -4.01902 | opp_overlap 182580, overlap 182574 ACATGGATTAAATAA TGAGTGTTTTT TTAA AAAAACACTCA TTAAGGGATAATATA AYWB_158 182654 - 182845 + | hypothetical protein AYWB_159 182790 - 182972 + | hypothetical protein AYWB_160 182984 - 183145 + | hypothetical protein AYWB_161 183167 - 183640 + | hypothetical protein TERM 258 183876 - 183897 + GF 74 -3.9 -5.20606 | AGTTCATTGTTTGAT TTTTTAATG CAAA TATTAAAAA TTTTTATTGATGTTT AYWB_162 183603 - 184277 + | hypothetical protein AYWB_163 184386 - 185351 + | hypothetical protein TERM 259 185465 - 185475 + F 70 -8.2 -3.07431 | opp_overlap 185464 185463, overlap 185464 CCCATCTTATAAAGC CCCC TTT GGGG TGTTGGGGGTCTTTT AYWB_164 185597 - 185800 + | hypothetical protein TERM 260 186067 - 186054 - g 76 -3.9 -5.49569 | TATGAATATAAAAAA TGTTT AAAT AAACA AAAATTAAAGAAACA AYWB_165 185961 - 186131 + | hypothetical protein AYWB_166 187109 - 186831 - | hypothetical protein TERM 261 186919 - 186904 - G 72 -3.4 -5.27335 | overlap 186914 186915 CTTTTTAAACAAAAA TAAAAA GAAC TTTTTA AAAAAATTGAAATAA TERM 262 187206 - 187185 - R 70 -3.9 -5.20606 | AAACATCAATAAAAA TTTTTAATA TTTG CATTAAAAA ATTAAACAATGAAAT TERM 263 188061 - 188022 - R 100 -21.2 -5.22104 | opp_overlap 188025 188028 188032 TAAAAAAGAACAAAA TAACAATAAAGACCAACT TTTA AGTTGGTCTTTATTGTTA TCATAAATATTTAGT TERM 264 188025 - 188058 + r 100 -18.5 -3.44608 | opp_overlap 188022, overlap 188028 188032 AAAAGAACAAAATAA CAATAAAGACCAACT TTTA AGTTGGTCTTTATTG TTATCATAAATATTT TERM 265 188028 - 188055 + r 100 -14.4 -3.8512 | opp_overlap 188022, overlap 188025 188032 AGAACAAAATAACAA TAAAGACCAACT TTTA AGTTGGTCTTTA TTGTTATCATAAATA TERM 266 188032 - 188051 + r 93 -10.8 -4.53419 | opp_overlap 188022, overlap 188028 188025 CAAAATAACAATAAA GACCAACT TTTA AGTTGGTC TTTATTGTTATCATA AYWB_167 188528 - 188139 - | hypothetical protein TERM 267 188394 - 188419 + g 95 -8.5 -5.16133 | overlap 188393 188391 188390 TAATTGTAATTTTGC TTCTAAAAGAG GTAG TTCTTTTAGAA TTTTTATATTCTGGT TERM 268 188803 - 188826 + r 89 -6.2 -5.42259 | opp_overlap 188815 ATAGAAACAAAACGC CTTAATTATT AACT AATAATTAGG TTTTTTTGAGCCTCG AYWB_168 189693 - 189481 - | hypothetical protein TERM 269 189806 - 189792 - H 70 -4.4 -5.02287 | opp_overlap 189799, overlap 189799 TACAAAAATAGAAAA TAAAAA ATT TTTTTA AAATCATCTTTGTAT TERM 270 189809 - 189799 - H 72 -2.6 -5.8901 | opp_overlap 189799, overlap 189792 ATAGAAAATAAAAAA TTTT TTT AAAA TCATCTTTGTATAAA AYWB_169 190085 - 190663 + | hypothetical protein TERM 271 190704 - 190740 + T 100 -13.9 -4.44974 | opp_overlap 190707 190710, overlap 190707 AATTAAATCATTTGA AAACAACCATCTACGGA ATT TCCGTAAATGGTTGTTA TTTTATCCCATTTAA TERM 272 190737 - 190707 - T 100 -17.8 -4.18094 | opp_overlap 190704 190707, overlap 190710 TAAATCATTTGAAAA CAACCATCTACGGA ATT TCCGTAAATGGTTG TTATTTTATCCCATT TERM 273 190707 - 190737 + T 100 -15.6 -4.32669 | opp_overlap 190707 190710, overlap 190704 TAAATCATTTGAAAA CAACCATCTACGGA ATT TCCGTAAATGGTTG TTATTTTATCCCATT TERM 274 190734 - 190710 - T 100 -13.7 -4.20148 | opp_overlap 190707 190704, overlap 190707 ATCATTTGAAAACAA CCATCTACGGA ATT TCCGTAAATGG TTGTTATTTTATCCC AYWB_170 190993 - 190784 - | hypothetical protein TERM 275 191934 - 191975 + H 100 -17.6 -3.77588 | overlap 191935 ATTTGAGTTTTTTGT GTGAGGTGTTCCAAAAGT GTTTAA ACTTTTGGAACACCTCAA TTCTTGCTGTCGGAT TERM 276 191935 - 191974 + H 100 -21.1 -2.86071 | overlap 191934 TTTGAGTTTTTTGTG TGAGGTGTTCCAAAAGT GTTTAA ACTTTTGGAACACCTCA ATTCTTGCTGTCGGA TERM 277 192057 - 192026 - H 79 -8.4 -3.85389 | opp_overlap 192030 192030 192030 192030 192030, overlap 192030 TCGGAAGAATTTAAA TAAATATATATATA TATA TATATATATATTCA CTGAACTTCTGATGA TERM 278 192053 - 192030 - H 79 -7 -4.52669 | opp_overlap 192030 192030 192030 192030 192030, overlap 192026 AAGAATTTAAATAAA TATATATATA TATA TATATATATA TTCACTGAACTTCTG TERM 279 192170 - 192149 - g 100 -11.7 -3.97602 | opp_overlap 192149 CAAGATATGGACAAA CGCTTCAAT AATT ATTGAAGCG TTTTATCAACTTATC TERM 280 192149 - 192170 + G 100 -11.7 -4.43859 | opp_overlap 192149 CAAGATATGGACAAA CGCTTCAAT AATT ATTGAAGCG TTTTATCAACTTATC AYWB_171 192069 - 192437 + | hypothetical protein TERM 281 192602 - 192620 + F 74 -3.1 -5.7946 | opp_overlap 192602, overlap 192605 TAAAAAAACAATTAA GACCTTC AAAAC GAAGATC TTTTTTTATTACCAA TERM 282 192642 - 192659 + F 73 -7.7 -3.91676 | overlap 192640 TATTACCAATTGTAA GCCACTT CCTA GAGTGGC TATTTTAGTTTATAA AYWB_172 192982 - 193194 + | hypothetical protein TERM 283 193395 - 193373 - f 71 -7.9 -3.19808 | overlap 193371 AAAATTAATTGAATA TGGTTTTAT TAAAG ATAAAACCA ATCAACAAAATAAAA AYWB_173 194029 - 194433 + | hypothetical protein TERM 284 194801 - 194789 - f 79 -4.9 -5.40474 | ATCGGGTTAAAAAAA TACAT CCT ATGTA TAAATATATATCCAA AYWB_174 195234 - 195935 + | hypothetical protein tra5 197239 - 196274 - | Tra5 transposase TERM 285 196494 - 196519 + g 71 -7.1 -3.70741 | overlap 196492 GCTTTTCTCGACATG CTGATTAAAAA ACCT TTTTTAATTAG TGTTTGTTGGACTTT TERM 286 197731 - 197743 + r 79 -4.9 -5.40474 | TTAGATATATATTTA TACAT GGG ATGTA TTTTTTTAACCCGAT AYWB_176 198332 - 197706 - | hypothetical protein TERM 287 198406 - 198389 - R 100 -9.9 -6.02914 | opp_overlap 198398 TTGATATAAAAAAAA GACCTTC AATT GAAGGTC AAGTTTGAATATTGA AYWB_177 199367 - 198510 - | hypothetical protein dnaG 200907 - 199582 - | DNA primase dnaB 202429 - 200933 - | replicative DNA helicase TERM 288 202086 - 202118 + g 72 -6.5 -4.38092 | overlap 202084 202090 202092 AGTTTTTCTTGGGTA TAGGTATGTTTTAGA TTA TCTAAAACATGATTA TTATTTTGGTTATTA TERM 289 202090 - 202114 + g 78 -9.5 -3.14308 | overlap 202086 202084 202092 TTTCTTGGGTATAGG TATGTTTTAGA TTA TCTAAAACATG ATTATTATTTTGGTT TERM 290 202092 - 202112 + g 81 -9.9 -3.10636 | overlap 202090 202086 202084 TCTTGGGTATAGGTA TGTTTTAGA TTA TCTAAAACA TGATTATTATTTTGG AYWB_180 203061 - 202450 - | hypothetical protein TERM 291 203092 - 203108 + r 81 -6.6 -4.7416 | opp_overlap 203092 TCTAAATAAAAAAAA GACTCT TAATT AGAGTC TTTTTAGGGTTTTAA TERM 292 203108 - 203092 - R 100 -6.6 -6.23545 | opp_overlap 203092 TCTAAATAAAAAAAA GACTCT TAATT AGAGTC TTTTTAGGGTTTTAA tmk 203860 - 203228 - | thymidylate kinase TERM 293 203918 - 203896 - R 84 -6.3 -5.24129 | opp_overlap 203898, overlap 203898 TTTGGGTATAAAAAA TAGACTCTC GTGAT GAGAGTCTT AATTAAAATTTATTT TERM 294 203916 - 203898 - R 84 -8.9 -4.25873 | opp_overlap 203898, overlap 203896 TGGGTATAAAAAATA GACTCTC GTGAT GAGAGTC TTAATTAAAATTTAT TERM 295 203898 - 203916 + r 80 -9.6 -3.39471 | opp_overlap 203896 203898 TGGGTATAAAAAATA GACTCTCG TGA TGAGAGTC TTAATTAAAATTTAT AYWB_182 204555 - 203917 - | hypothetical protein TERM 296 204609 - 204591 - R 100 -11.8 -5.60993 | opp_overlap 204581 204591 TTGGGTATAAAAAAA GACTCTCA TGA TGAGAGTC TTAATTAAGATTTAT TERM 297 204591 - 204609 + r 89 -11.8 -3.39471 | opp_overlap 204591, overlap 204581 TTGGGTATAAAAAAA GACTCTCA TGA TGAGAGTC TTAATTAAGATTTAT AYWB_183 205760 - 204771 - | fragment of ATP-dependent Zn protease TERM 298 205785 - 205758 - G 100 -10.1 -5.7827 | opp_overlap 205761 205764 AACATAAACAAAAAA CAATAATGCAA AGAAAA TTGCATTATTG TTACCACCAACGTTT AYWB_184 208041 - 205786 - | hypothetical protein TERM 299 206948 - 206960 + g 71 -2.7 -5.38054 | TGAATATAGTAATAC TTGAC GTT GTTAA TTTTTATTTCTAAGC TERM 300 207967 - 207979 + g 71 -2.7 -5.40873 | TAAATATCCCTTTTC GGTTT CTA AAATC TTTTGTTTTTCTCTT AYWB_185 208964 - 208107 - | hypothetical protein TERM 301 208532 - 208543 + g 73 -4.4 -5.00616 | CATTTATATAATGAG CCAA ATCT TTGG TTTTTTCCCAAGCAG TERM 302 208710 - 208726 + g 70 -5.9 -4.42235 | CCAATTATCTTGCTT TTGTTGG GTT TCAACAA TTATTTTTGGGGGTT AYWB_186 209243 - 208971 - | hypothetical protein hflB 211371 - 209263 - | ATP-dependent Zn protease TERM 303 211342 - 211359 + g 72 -5.7 -4.61284 | opp_overlap 211342 ACCACATACAACTAA CAAATTT AAAT AAATTTG TTTTAATTTCATATT AYWB_188 212321 - 211461 - | hypothetical protein TERM 304 212171 - 212197 + g 79 -9.6 -3.17571 | opp_overlap 212173 212175, overlap 212146 TTGATGATTGTTCAA CAGACAAAAAAA CAT TGTTTTTGTCTG TTGAATTGACAGGTT AYWB_189 213121 - 212327 - | hypothetical protein AYWB_190 213426 - 213145 - | hypothetical protein AYWB_191 213859 - 213419 - | hypothetical protein himA 214387 - 214055 - | DNA-binding protein HU TERM 305 214147 - 214161 + g 81 -2.1 -5.9663 | TTTTTAAATTTTTAC CAGTT CTTTT GACTG TTTTTTTTCCTGTTT TERM 306 214418 - 214432 + r 70 -7.8 -3.55453 | opp_overlap 214418, overlap 214414 TGGTTTATAAAAAAA GTCCCT TTT GGGGAC TTAATTGTATTAATA TERM 307 214432 - 214418 - R 100 -7.1 -5.60993 | opp_overlap 214418 214414 TGGTTTATAAAAAAA GTCCC TTTTG GGGAC TTAATTGTATTAATA ssb 214762 - 214448 - | single-stranded DNA binding protein rpoD 215390 - 214764 - | RNA polymerase sigma factor TERM 308 215333 - 215346 + g 84 -3.9 -5.75538 | CGATTAATTGATTAC GAATT TCTA AATTC TTTTTATTTTTTAAA TERM 309 215479 - 215460 - H 100 -7.2 -5.95539 | CTTGAAACAAAAAAA GACTAACT TAAT AGTTAGCC TTAAAGAATTTTTAA AYWB_195 215505 - 215717 + | hypothetical protein AYWB_196 216208 - 215987 - | hypothetical protein TERM 310 216047 - 216067 + g 70 -8.5 -2.52676 | overlap 216052 ACGTAACAGTGCAGG CTTAATAAA TTG TTTATTAAG TAAATTAAAGAACTG TERM 311 216458 - 216439 - R 100 -8.6 -5.60993 | TTGGGCATAAAAAAA GACCTTCA ATTT TGAAGGCC TTAGGGTTTTAATTA AYWB_197 216836 - 216510 - | hypothetical protein AYWB_198 217102 - 216938 - | hypothetical protein TERM 312 217579 - 217595 + r 90 -10.9 -3.73281 | opp_overlap 217579 TTGGGTAATAAAAAA GACCCTT GTG AAGGGTC TTTGGATGATATTTT TERM 313 217595 - 217579 - R 100 -10.9 -5.4505 | opp_overlap 217579 TTGGGTAATAAAAAA GACCCTT GTG AAGGGTC TTTGGATGATATTTT AYWB_199 217903 - 217613 - | hypothetical protein AYWB_200 218329 - 218168 - | hypothetical protein AYWB_201 218785 - 218456 - | hypothetical protein TERM 314 219048 - 219034 - R 95 -7.8 -5.45802 | opp_overlap 219029 219034 TGGGTAAAAGAAAAA GACCCC GAA AGGGTC TTTGATTTGTTATTA TERM 315 219034 - 219048 + r 76 -7.1 -4.26832 | opp_overlap 219034, overlap 219029 TGGGTAAAAGAAAAA GACCC CGAAA GGGTC TTTGATTTGTTATTA AYWB_202 219605 - 219303 - | hypothetical protein AYWB_203 220554 - 219745 - | hypothetical protein AYWB_204 220844 - 220581 - | hypothetical protein TERM 316 220922 - 220945 + r 100 -6.2 -5.75538 | gap 1, opp_overlap 220922 220921, overlap 220925 ATATTAAAAATACAT CTT-TGTTTTC AGA GAAAACATAAG TTTTTATTTTTTCAA TERM 317 220925 - 220941 + r 70 -8.1 -2.9976 | opp_overlap 220922 220921, overlap 220922 TTAAAAATACATCTT TGTTTTC AGA GAAAACA TAAGTTTTTATTTTT AYWB_205 221575 - 221276 - | hypothetical protein TERM 318 221772 - 221791 + H 100 -7.2 -6.20267 | opp_overlap 221786 TTAAAAATTCTTTAA GGCTAACT ATTA AGTTAGTC TTTTTTTCTTTTTAA AYWB_206 221861 - 222223 + | hypothetical protein TERM 319 222485 - 222459 - f 82 -4.5 -5.77856 | opp_overlap 222465, overlap 222465 AATAAATTAAAAAAA TAAAAAGACCC GAATA AGGTCTTTTTT TTATTAAGAAAGGAA TERM 320 222479 - 222465 - f 76 -3.5 -5.86609 | opp_overlap 222465, overlap 222459 TTAAAAAAATAAAAA GACCC GAATA AGGTC TTTTTTTTATTAAGA TERM 321 222465 - 222479 + F 75 -2.8 -6.09888 | opp_overlap 222465 222459 TTAAAAAAATAAAAA GACC CGAATAA GGTC TTTTTTTTATTAAGA AYWB_207 222685 - 223062 + | hypothetical protein AYWB_208 223208 - 223531 + | hypothetical protein AYWB_209 223565 - 223720 + | hypothetical protein himA 224084 - 224374 + | DNA-binding protein HU AYWB_211 224480 - 224686 + | hypothetical protein TERM 322 224827 - 224815 - g 81 -2 -5.95449 | AAAGAAAAGAAAAAA TTCA ATTAA TGAA CAATCTTCCTTTTTT AYWB_212 224688 - 225296 + | hypothetical protein TERM 323 225328 - 225310 - f 81 -7.5 -4.59591 | opp_overlap 225310, overlap 225305 225302 AATAAAACATCAAAA GACCAAT TAATT ATTGGTC TTTTTTTATTGAGAA TERM 324 225310 - 225328 + F 100 -7.5 -5.7946 | opp_overlap 225305 225302 225310 AATAAAACATCAAAA GACCAAT TAATT ATTGGTC TTTTTTTATTGAGAA TERM 325 225786 - 225768 - g 71 -3.9 -5.18297 | gap 1, opp_overlap 225768, overlap 225771 CAACAATAAAGAAAA CTACACCA ATAT TGGTG-AG GTTGATTCGCCCTTA hflB 225535 - 226548 + | ATP-dependent Zn protease AYWB_214 226618 - 227451 + | hypothetical protein TERM 326 227660 - 227647 - T 75 -3.9 -5.58522 | opp_overlap 227647, overlap 227641 TATACAAAATAAAAA GAAAA TACA TTTTC TTATTAATAATATCA tra5 228689 - 227748 - | Tra5 transposase AYWB_216 229503 - 229141 - | hypothetical protein AYWB_217 229750 - 229436 - | hypothetical protein TERM 327 229485 - 229468 - G 71 -7.1 -3.71649 | opp_overlap 229468 GGGGTAAATCTGAAA GTAATAG TTTA CTATTAC TAGAAGAGAAATTAT TERM 328 229824 - 229807 - R 100 -9.9 -5.71712 | opp_overlap 229816 TTTGATATAAAAAAA GACCTTC AATT GAAGGTC AAGTTTGAATATTGA AYWB_218 230414 - 230250 - | hypothetical protein dnaG 231952 - 230627 - | DNA primase dnaB 233473 - 231977 - | replicative DNA helicase AYWB_221 234099 - 233494 - | hypothetical protein TERM 329 234128 - 234145 + r 77 -5.6 -4.95211 | opp_overlap 234128, overlap 234123 234120 234119 CTTTAAATAAAAAAA GACCTT TAAATT AAGGTC TTTTGTTGGTTTTTT TERM 330 234145 - 234128 - R 93 -5.6 -5.95539 | opp_overlap 234128 234123 234120 234119 CTTTAAATAAAAAAA GACCTT TAAATT AAGGTC TTTTGTTGGTTTTTT TERM 331 234196 - 234223 + r 71 -6.3 -4.21098 | opp_overlap 234197 234200 234202, overlap 234197 234202 TTAGTTTTCCATTTA ACAAGACCGTC CTTGGT GACGGTTTTGA TTTTGCCGTTGGTAT TERM 332 234197 - 234222 + r 77 -9.8 -3.11936 | opp_overlap 234197 234200 234202, overlap 234196 234202 TAGTTTTCCATTTAA CAAGACCGTC CTTGGT GACGGTTTTG ATTTTGCCGTTGGTA TERM 333 234202 - 234217 + r 75 -6.1 -4.67641 | opp_overlap 234202 234200 234197, overlap 234197 234196 TTCCATTTAACAAGA CCGTC CTTGGT GACGG TTTTGATTTTGCCGT TERM 334 234255 - 234268 + r 74 -3.1 -5.89827 | overlap 234256 GTAGTAATAAGTGTT TCTGT TTTT ACAGG TTTTTTTTAGTAATT tmk 234907 - 234275 - | thymidylate kinase TERM 335 234966 - 234948 - R 100 -8.9 -5.60993 | TTGGGTATAAAAAAA GACCTTC GATTT GAAGGTC TAAAATAATTAATTA AYWB_223 235608 - 234979 - | hypothetical protein TERM 336 236126 - 236111 - R 100 -9 -5.7946 | opp_overlap 236111 TGGGTAATAAAAAAA GACCCT GAGG AGGGTC TTTATAAAAAGTTAA TERM 337 236111 - 236126 + r 82 -9 -3.87869 | opp_overlap 236111 TGGGTAATAAAAAAA GACCCT GAGG AGGGTC TTTATAAAAAGTTAA AYWB_224 236543 - 236169 - | hypothetical protein AYWB_225 237474 - 236782 - | hypothetical protein AYWB_226 238134 - 237514 - | hypothetical protein AYWB_227 238648 - 238235 - | hypothetical protein TERM 338 238578 - 238606 + gr 90 -11.1 -3.15579 | opp_overlap 238600 TCATAGATTTGTTCT GGTTCAGTTGTTG TTT TATCAACTGAACC TTGATCAGGGATTGA AYWB_228 239486 - 238611 - | hypothetical protein TERM 339 238917 - 238904 - GR 74 -3.8 -5.24515 | AAGAAACAAAGAAAA TGGC CTTGCT GCCA AATCTTAACAGTTTG TERM 340 238961 - 238945 - GR 77 -9.5 -2.94144 | opp_overlap 238945, overlap 238942 TTGCCACCGAAATTA GCTACTT TAG AAGTAGC TTTCTTTTGAACGAT TERM 341 238945 - 238961 + gr 100 -9.5 -4.65263 | opp_overlap 238942 238945 TTGCCACCGAAATTA GCTACTT TAG AAGTAGC TTTCTTTTGAACGAT TERM 342 239538 - 239523 - R 100 -7.6 -5.71712 | opp_overlap 239523 TTTGATATAAAAAAA GACTCT AAAT AGAGTC TTTTAATGTTGGTGA TERM 343 239523 - 239538 + r 80 -7.6 -4.44797 | opp_overlap 239523 TTTGATATAAAAAAA GACTCT AAAT AGAGTC TTTTAATGTTGGTGA hflB 241868 - 239562 - | ATP-dependent Zn protease TERM 344 240435 - 240448 + g 74 -2.3 -5.63504 | overlap 240436 TTCTGGGTTTTTTGT TTGCC ATTT GGCGG TTTTTTTGTAGGCTT himA 242194 - 241904 - | DNA-binding protein HU AYWB_231 242364 - 242191 - | hypothetical protein ssb 242712 - 242377 - | single-stranded DNA binding protein rpoD 243499 - 242894 - | RNA polymerase sigma factor TERM 345 243589 - 243571 - H 79 -2.5 -6.28967 | gap 1, overlap 243573 GATAAAGAAAAAAAA GACTAACT TAAT AGTTAG-C ATTAAAAAACTTTTA TERM 346 243588 - 243573 - H 78 -6.2 -4.74858 | overlap 243571 TAAAGAAAAAAAAGA CTAACT TAAT AGTTAG CATTAAAAAACTTTT AYWB_234 243616 - 244419 + | hypothetical protein TERM 347 244505 - 244462 - f 74 -8.6 -3.36175 | gap 1, opp_overlap 244462 AATAAAGTTGTATAA TAGTAGTAATTAATTATTTTC AAA GATAATA-TCAATTACTACTA TTATCGGAAAGGCTA AYWB_235 244595 - 244825 + | hypothetical protein AYWB_236 245158 - 245736 + | hypothetical protein AYWB_237 246006 - 246401 + | hypothetical protein TERM 348 246459 - 246444 - f 84 -9 -4.18763 | opp_overlap 246444, overlap 246437 AATAAATTCCCAAAA GACCCT CCCT AGGGTC TTTTTCTTTTATCCA TERM 349 246444 - 246459 + F 100 -9 -5.54907 | opp_overlap 246437 246444 AATAAATTCCCAAAA GACCCT CCCT AGGGTC TTTTTCTTTTATCCA AYWB_238 246709 - 247158 + | hypothetical protein AYWB_239 247169 - 247876 + | hypothetical protein TERM 350 247902 - 247883 - f 84 -5 -5.89827 | opp_overlap 247885, overlap 247885 AACCATTAAAAAAAA TACCAACT TTTA AGTTGGTT TCCTTATTGTTTCTA TERM 351 247900 - 247885 - f 81 -7.6 -4.5787 | opp_overlap 247885, overlap 247883 CCATTAAAAAAAATA CCAACT TTTA AGTTGG TTTCCTTATTGTTTC TERM 352 247885 - 247900 + F 78 -7.6 -4.17355 | opp_overlap 247885 247883 CCATTAAAAAAAATA CCAACT TTTA AGTTGG TTTCCTTATTGTTTC AYWB_240 247966 - 248121 + | hypothetical protein TERM 353 248283 - 248304 + F 100 -5.9 -5.80364 | AATGAATATTTTAGC CCAAACTGT AAAA AAAGTTTGG TTTTTTTGTTGAAAT TERM 354 248396 - 248419 + F 89 -6.1 -5.36441 | TTTATAATTCCCCAC CTCAAACTA TTTACT TAGTTTGGG TTTTTTATATCCAAA rpsD 248691 - 249287 + | 30S ribosomal protein S4 TERM 355 249294 - 249311 + F 82 -4.8 -5.82281 | opp_overlap 249294 AATAGATAACTTAAA CGCCCT TTAATT AGGGTG TTTTTTTGTGTATTT TERM 356 250792 - 250803 + G 73 -3 -5.40072 | CGTTTTGCGTCATGC CTAT CTGA ATAG TTTTTTTCAAACAGG TERM 357 251890 - 251879 - g 71 -4.4 -4.87665 | TTTTATTTACAAAAA CCAT GTAA ATGG GATTTTGCAAGCATT mgtB 249650 - 252328 + | Mg(2+) transport ATPase, P-type AYWB_243 252506 - 253297 + | hypothetical protein TERM 358 254088 - 254100 + G 70 -6.3 -4.15698 | opp_overlap 254088 ACCACAAATAATAAA CTTGA TAT TCAAG TTATTTATGTAGATG TERM 359 254100 - 254088 - g 77 -6.3 -4.63952 | opp_overlap 254088 ACCACAAATAATAAA CTTGA TAT TCAAG TTATTTATGTAGATG degV 253401 - 254267 + | DegV family protein TERM 360 254433 - 254402 - f 88 -10.5 -3.68738 | opp_overlap 254402, overlap 254407 TATTTTAAGATACAA TATAATGTAACTA TATATT TAGTTACATTATA TTTTTATATCCTTGA TERM 361 254402 - 254433 + F 100 -10.5 -5.04175 | opp_overlap 254402 254407 TATTTTAAGATACAA TATAATGTAACTA TATATT TAGTTACATTATA TTTTTATATCCTTGA TERM 362 254687 - 254671 - g 70 -2.3 -5.5353 | overlap 254664 254673 GACACCAATAAAAAA TTTTTAG TTC CTAAAGA GCATAGTTTTTTAAT AYWB_245 254470 - 255069 + | hypothetical protein TERM 363 255198 - 255215 + F 100 -7 -5.55001 | opp_overlap 255198 255193 TTTCAAATAAGCGAA GACCGT ATCAGC ACGGTC TTTTCTTTTTTCTTG AYWB_246 255366 - 255773 + | hypothetical protein TERM 364 255955 - 255969 + F 71 -3.6 -5.41143 | overlap 255968 CAGAGGAAATAGTGA TGAATC CTT GATTTA TTTTTTTAAAAAATA AYWB_247 256185 - 256346 + | hypothetical protein TERM 365 256476 - 256458 - g 73 -8.2 -3.40164 | opp_overlap 256457 256458 AAAACAAATGATTAA TTCGCATC CTA AATGCGAA GTTTTGAAAGTTTTT AYWB_248 256363 - 256608 + | hypothetical protein AYWB_249 256611 - 256868 + | hypothetical protein AYWB_250 256969 - 257133 + | hypothetical protein qri7 257130 - 257954 + | O-sialoglycoprotein endopeptidase TERM 366 257986 - 258013 + T 100 -6.4 -5.91981 | opp_overlap 257991 TTTGAATATAATGAA AAAAAGATTCCT AAAA GGGAATCTTTTA TTTTTTTTACCTTTT TERM 367 258008 - 257991 - T 89 -5.6 -5.69379 | opp_overlap 257986 ATATAATGAAAAAAA GATTCC TAAAAG GGAATC TTTTATTTTTTTTAC TERM 368 258851 - 258835 - T 100 -9.5 -5.71712 | opp_overlap 258835 TTTTATATAAAAAAA GAGACTT AAA AAGTCTC TTTTGGGATTATTTC TERM 369 258835 - 258851 + T 86 -9.5 -4.2573 | opp_overlap 258835 TTTTATATAAAAAAA GAGACTT AAA AAGTCTC TTTTGGGATTATTTC AYWB_252 259486 - 258896 - | glycoprotease family protein AYWB_253 260066 - 259578 - | uncharacterised P-loop hydrolase gyrA 262664 - 260157 - | DNA gyrase subunit A gyrB 264778 - 262763 - | DNA gyrase subunit B TERM 370 263538 - 263560 + g 70 -8.4 -2.71712 | overlap 263537 CTTACTACTTCACGA GCACGTTTAG CAG CTAGACGGGC ATTTGCAGAAAGAAG AYWB_256 265169 - 265660 + | hypothetical protein AYWB_257 266158 - 265844 - | hypothetical protein TERM 371 265949 - 265959 + g 73 -5.4 -4.81523 | opp_overlap 265949, overlap 265943 TAATTTAAGTAAGAA GAGT AGA ACTC TTTTAGTTTTTAGTT TERM 372 266255 - 266239 - H 100 -8.1 -5.57054 | opp_overlap 266238 AATAAGTTAAAAAAA TCTTTTG TTA CAAAAGA ATTAACTTAAGTATT TERM 373 266580 - 266602 + H 73 -4.3 -5.47218 | opp_overlap 266580 TTAATACTCATCAAT TATGGTTAA AAAAG TTAATCATA TTTTTTTAAATCAAC AYWB_258 268010 - 268243 + | hypothetical protein TERM 374 268276 - 268266 - f 73 -4 -5.4148 | CAAATAATCAAAAAA CTTT ATC AAAG ACTTTCTGACATAAA TERM 375 268662 - 268640 - f 76 -8 -3.83927 | ATATAAAGACTCAAA TTATTTTTTT ATA AAAAAAATAA AAATTTCAAAATAAA TERM 376 269000 - 268990 - g 74 -2.6 -5.69023 | overlap 268981 AAAACATTAAAAAAA TTTA AAA TAAA ATTAAATAATGAATT AYWB_259 268741 - 269520 + | hypothetical protein TERM 377 269586 - 269599 + F 81 -3.9 -5.95539 | AAAATTCTTTAAGGC TAACT TCAT AGTTA TTTTTTTGTTTCAAA TERM 378 269720 - 269681 - f 74 -3.8 -5.52986 | opp_overlap 269673 269681, overlap 269717 269718 ACTTTAGTAAAAAAA TAAGTTCAAAATTTAAAT ATTA ATTTATATTAAGAACTTA TTTGTATATTTTTAA AYWB_260 270423 - 271004 + | hypothetical protein TERM 379 271021 - 271038 + T 72 -2.7 -5.81032 | opp_overlap 271021 CTTTCAAATTAGTAA CAATCCA TCAA TGTATTG TTTTTTTTAAGATTA TERM 380 271910 - 271927 + T 86 -8.5 -4.57073 | opp_overlap 271910 271913 AGACTGGATAGTAGA CAAGAAG GCAT CTTCTTG TTTTTAAAAGACCTA TERM 381 271927 - 271910 - T 72 -8.5 -2.86177 | opp_overlap 271910, overlap 271913 AGACTGGATAGTAGA CAAGAAG GCAT CTTCTTG TTTTTAAAAGACCTA TERM 382 273414 - 273398 - T 71 -8.7 -2.62396 | overlap 273400 CAGTTGGTTAGAGCA CACGCCT GAT AAGCGTG AGGTCGGTGGTTCAA TERM 383 273691 - 273660 - T 83 -10.4 -3.1577 | overlap 273658 ATTGAAGATGTAATA TTCTTCTAATACGA TTTA TCTTATTAGAAGAA AGGAAACGCGGCGAA TERM 384 274016 - 274005 - T 76 -7.2 -4.2354 | GAAAGGTGAAAAGAA CCCC GAAA GGGG AGTGAAATAGATCCT AYWB_261 275914 - 275273 - | hypothetical protein TERM 385 277667 - 277685 + r 81 -6 -5.02287 | opp_overlap 277664 277665 277667 CAAATAAACAAATGA GTAGCC CCAAAAA GGCTAC TTTTATCTTTTTATA TERM 386 277770 - 277735 - R 86 -10.7 -3.48684 | opp_overlap 277745 277765, overlap 277737 277745 TTATAACTATTAGAA TATAAAAAAACCACC TTTTTG GGTGGTTTTTTTATT GATATAAATTTTAAT TERM 387 277768 - 277737 - R 95 -13.3 -3.31133 | opp_overlap 277745 277765, overlap 277735 277745 ATAACTATTAGAATA TAAAAAAACCACC TTTTTG GGTGGTTTTTTTA TTGATATAAATTTTA TERM 388 277760 - 277745 - R 100 -6.1 -5.84432 | opp_overlap 277745, overlap 277737 277735 TAGAATATAAAAAAA CCACC TTTTTG GGTGG TTTTTTTATTGATAT TERM 389 277745 - 277760 + r 100 -6.8 -5.85737 | opp_overlap 277745 277737 277735 TAGAATATAAAAAAA CCACCT TTTT GGGTGG TTTTTTTATTGATAT artM 278666 - 277932 - | ABC-type amino acid transport system, permease component artI 279544 - 278669 - | ABC-type amino acid transport system, solute-binding protein TERM 390 278933 - 278923 - G 76 -4 -5.40072 | opp_overlap 278923 TTTTTTCTAAAAAAA TATC TGC GATA TCTGATTCTACAATA TERM 391 279059 - 279069 + g 70 -3.2 -5.24449 | ATATGTAGAACCACT TTGG TAA CCGA TTTTTTCACTTTGTA artP 280478 - 279732 - | ABC-type polar amino acid transport system, ATPase component artQ 281172 - 280471 - | ABC-type amino acid transport system, permease component TERM 392 280973 - 280960 - G 71 -2.5 -5.45652 | ACTTTTAACAAAAAA TATAT AAAA ATATA ATAAAATATCTATCG TERM 393 281494 - 281517 + H 71 -3.8 -5.49729 | opp_overlap 281491 281494 TTTATAAAATAACAA CCATTAAGGG GATG CCGTAAATGG TTTTTTTCAATAATT TERM 394 283039 - 283054 + G 70 -6.2 -4.17355 | TTCTGGTACATGTTT TTCTTG TCCT CAAGAA TCTTTTTTAGCATTA AYWB_266 282167 - 283462 + | hypothetical protein TERM 395 283505 - 283525 + F 86 -8.3 -4.89477 | TTTTTAATTAATTTT GCTGTCTAA TTA TTGGACGGC TTTTGTTGTTGGAAA TERM 396 283560 - 283545 - f 71 -3.4 -5.40072 | opp_overlap 283545, overlap 283557 GTTGTTGGAAAAAAA TAAATA AAAT TATTTA TAAATTACAAAAACC AYWB_267 283691 - 283870 + | hypothetical protein TERM 397 284611 - 284582 - g 74 -2.8 -5.71712 | overlap 284584 284585 TCTTATATAAAAAAA GATGGCGACTTC ATTGAA GAAGTCACCCTA GACATAAAAATATAC TERM 398 284609 - 284584 - g 70 -5.4 -4.50122 | overlap 284582 284585 TTATATAAAAAAAGA TGGCGACTTC ATTGAA GAAGTCACCC TAGACATAAAAATAT TERM 399 284608 - 284585 - g 78 -8.9 -3.28446 | overlap 284584 284582 TATATAAAAAAAGAT GGCGACTTC ATTGAA GAAGTCACC CTAGACATAAAAATA TERM 400 284830 - 284820 - g 84 -4 -5.82388 | AAATTCTAAAAAAAA GTTT ATC AAAC AATATGAGGAGTTTT TERM 401 284888 - 284861 - g 80 -7.9 -4.57882 | opp_overlap 284861 TGGAAGAACAAGAAA TCGAAACCAAA TCAATT TTTAGTTTCGA TTCTTTTAAGAATAA AYWB_268 284231 - 284926 + | hypothetical protein AYWB_269 285462 - 286169 + | hypothetical protein TERM 402 286289 - 286259 - f 100 -16.4 -4.66537 | opp_overlap 286264, overlap 286261 TCCTTTAATATAAAA CATAAGCCCCTAAT TTA ATTAGGGGCTTATA CAAGAAAGAGTTTAT TERM 403 286287 - 286261 - f 100 -16.8 -3.94773 | opp_overlap 286264, overlap 286259 CTTTAATATAAAACA TAAGCCCCTAAT TTA ATTAGGGGCTTA TACAAGAAAGAGTTT TERM 404 286264 - 286284 + F 100 -14.1 -3.28712 | opp_overlap 286261 286259 TAATATAAAACATAA GCCCCTAAT TTA ATTAGGGGC TTATACAAGAAAGAG AYWB_270 286307 - 286465 + | hypothetical protein TERM 405 286629 - 286588 - f 78 -6.1 -4.74611 | opp_overlap 286589, overlap 286585 286589 GACTATAAAAAATAA TTTCCTATCCTTTCTAAAA ACGT TTTTAGAAAGGATTAAAAT GTTAAGACAAGAATT TERM 406 286628 - 286589 - f 80 -9.6 -3.4314 | opp_overlap 286589, overlap 286588 286585 ACTATAAAAAATAAT TTCCTATCCTTTCTAAAA ACGT TTTTAGAAAGGATTAAAA TGTTAAGACAAGAAT TERM 407 286896 - 286915 + F 100 -9.4 -5.95539 | opp_overlap 286898 286910 TTAAAAATTCTTTAA GACTAACT ATTA AGTTAGTC TTTTTTTGTTTCAAA TERM 408 287043 - 287030 - f 78 -3.9 -5.75538 | TTTAAAAAATAAAAA GAATT TGGA AATTC GTAATCAATTAATCG ssb 287614 - 287928 + | single-stranded DNA binding protein TERM 409 288229 - 288215 - g 81 -2.1 -5.9663 | AAACAGGAAAAAAAA CAGTC AAAAG AACTG GTAAAAATTTAAAAA himA 287953 - 288321 + | DNA-binding protein HU AYWB_273 288516 - 288959 + | hypothetical protein AYWB_274 288946 - 289242 + | hypothetical protein TERM 410 289254 - 289272 + F 100 -8.9 -5.93809 | opp_overlap 289250 289247 289254 ATAAATAACAACCAA GACTCTC ACCAC GAGAGTC TTTTTTTTGTACCAA TERM 411 289272 - 289254 - f 82 -9.6 -3.66439 | opp_overlap 289254, overlap 289250 289247 ATAAATAACAACCAA GACTCTCA CCA CGAGAGTC TTTTTTTTGTACCAA hflB 289308 - 291455 + | ATP-dependent Zn protease TERM 412 291753 - 291779 + G 70 -5.9 -4.29977 | CAATCCTCATTTTAT TACCACTCACA CTAAT TGTAGGTGGTA TTTATTGGGTTCTTT TERM 413 292122 - 292106 - g 95 -5.9 -5.87688 | overlap 292119 ATAATTCAAAAAAAA GCTACTT CCA AAATAGC GAATGTCGGTAGTAA AYWB_276 291476 - 292378 + | hypothetical protein TERM 414 293549 - 293537 - g 71 -2.7 -5.38054 | GCCTAGAAATAAAAA TTAAC AAT GTCAA GTATTACTATATTAA AYWB_277 292468 - 293625 + | hypothetical protein AYWB_278 293659 - 294771 + | hypothetical protein AYWB_279 294852 - 295658 + | hypothetical protein AYWB_280 295679 - 295942 + | hypothetical protein TERM 415 296022 - 296040 + F 100 -8.9 -5.60993 | opp_overlap 296022 ATAAATCCAACCCAA GACTCTC ATCAC GAGAGTC TTTTTTTATACCCAA TERM 416 296040 - 296022 - f 79 -9.6 -3.2285 | opp_overlap 296022 ATAAATCCAACCCAA GACTCTCA TCA CGAGAGTC TTTTTTTATACCCAA AYWB_281 296316 - 296684 + | hypothetical protein TERM 417 296703 - 296685 - f 100 -11.8 -4.1851 | opp_overlap 296685 CTAAATCACAAATAA GACCTTCA AAT TGAAGGTC TTTTTTTATACCCAA TERM 418 296685 - 296703 + F 100 -11.8 -5.60993 | opp_overlap 296685 CTAAATCACAAATAA GACCTTCA AAT TGAAGGTC TTTTTTTATACCCAA tmk 296743 - 297372 + | thymidylate kinase TERM 419 297392 - 297380 - f 75 -4.1 -5.57396 | ATAATTAAGAAAAAA TACCA AAA CGGTA ATCTATATATCCATT TERM 420 297492 - 297508 + F 100 -6.6 -6.23545 | opp_overlap 297492 TCAAAAACCCCAAAA GACTCT AACCA AGAGTC TTTTTTTTATTTAGA TERM 421 297508 - 297492 - f 73 -6.6 -4.31329 | opp_overlap 297492 TCAAAAACCCCAAAA GACTCT AACCA AGAGTC TTTTTTTTATTTAGA TERM 422 297870 - 297837 - g 82 -9.2 -3.84266 | gap 1 ATACCTGACATTAAA TTCGATTTGGTTTTA TTCAC TAAAACCAAA-CGAA TAATGGCCTTCAATT AYWB_283 297537 - 298148 + | hypothetical protein dnaB 298166 - 299668 + | replicative DNA helicase TERM 423 300378 - 300356 - g 95 -12.2 -3.19808 | overlap 300354 300349 AAAATTAATCGAATA TGGTTTTATC AAA GATAAAACCA ATCAACAAAATAAAA dnaG 299694 - 301019 + | DNA primase TERM 424 301095 - 301134 + G 74 -2.3 -5.69262 | gap 1, opp_overlap 301096, overlap 301096 CAAACACGCGCATAT ACCCTAAATTTTGCGA TTTTATTTT TCGC-AAATTTGGGGA TTTTTATTTTTATAA TERM 425 301782 - 301770 - g 79 -4.9 -5.40474 | ATCGGGTTAAAAAAA TACAT CCC ATGTA TAAATATATATCCAA AYWB_286 301055 - 301807 + | hypothetical protein TERM 426 302732 - 302714 - g 71 -4 -5.02439 | ATATAATTATAAAAA TAATTTAA AAG CTAAATTA AAAGTAGTAGATAAT tra5 302292 - 303257 + | Tra5 transposase TERM 427 303896 - 303886 - g 74 -4 -5.31456 | GCAATTGATAAAAAA TCTA AGT TAGA AAAAATTATTCAACA mgs1 303649 - 304893 + | recombination factor protein RarA TERM 428 305222 - 305211 - f 74 -7.2 -4.01902 | opp_overlap 305208 305211 ATAGTTATTAAATAA GCGC TTTA GCGC GCTAATCTTTTTGTT TERM 429 305836 - 305818 - g 71 -4 -5.02439 | ATATAATTATAAAAA TAATTTAA AAG CTAAATTA AAAGTAGTAGATAAT tra5 305396 - 306361 + | Tra5 transposase TERM 430 306876 - 306886 + G 71 -4 -5.10461 | opp_overlap 306876 TATATATTAAACAAG TTCA TCA TGAA TTTTTATTAAATAAA AYWB_290 306692 - 306964 + | hypothetical protein TERM 431 307067 - 307049 - g 77 -6.2 -4.77036 | opp_overlap 307049 307054, overlap 307054 TTGTATTATGAAAAA TTAAATTA TTA TAATTTAA TAACTTTGGATGTTT AYWB_291 307022 - 307696 + | hypothetical protein AYWB_292 308395 - 308598 + | hypothetical protein AYWB_293 308558 - 309067 + | hypothetical protein TERM 432 309299 - 309263 - f 73 -4 -5.3321 | AAGTAATAAGAAAAA GATTTTTTTTAAAAGA AGCAA TATTTTGAAAAAAATC AGCAATCGCTTACAA TERM 433 309504 - 309492 - f 74 -6.3 -4.40882 | overlap 309495 TAGAAATGAAAAGAA CAATC CCT GATTG GGAATAAAAAAATTA TERM 434 309720 - 309702 - g 75 -3.3 -5.55695 | overlap 309711 GAATAATATAAAAAA TAAAATT GATGA AATTTTA TCTCAAATTAAAAAA AYWB_294 309538 - 310035 + | hypothetical protein TERM 435 310047 - 310062 + T 85 -4.6 -5.9218 | TTAATTATTTAACAA GGCCCT CTTT GGGGTC TTTTTTTATTATCTC TERM 436 310228 - 310213 - T 74 -3.2 -5.7946 | opp_overlap 310213 TTGTCAATAAAAAAA GACCAT GAGG AAGGTC TTAATTAAAATAGTA AYWB_295 310584 - 310264 - | hypothetical protein AYWB_296 311158 - 311000 - | hypothetical protein AYWB_297 313042 - 312356 - | hypothetical protein AYWB_298 314084 - 313866 - | hypothetical protein AYWB_299 314346 - 314107 - | hypothetical protein AYWB_300 314605 - 314372 - | hypothetical protein TERM 437 315077 - 315092 + G 70 -6.2 -4.17355 | TTCTCGTACATGTTT TTCTTG TCCT CAAGAA TCTTTTTTAGCATTA AYWB_301 315051 - 315305 + | hypothetical protein mutT 316503 - 317012 + | MutT/NUDIX family phosphohydrolase TERM 438 317125 - 317145 + T 71 -3.3 -5.61824 | TGTTTTAACTAAAAA GACTATC TAATGGC GGTAGTC TTTTTTTGCATTTTC AYWB_303 317357 - 317127 - | hypothetical protein TERM 439 317573 - 317560 - g 77 -5.3 -5.01732 | overlap 317572 AATTCTTCCAAAAAA GCTTT AAGA AAAGC TAGAACTATAGCTAA TERM 440 317940 - 317950 + G 75 -5.4 -4.92239 | AGAATTTGAAGGTAG CATC GGT GATG TTTTTCGCTTTTTGG TERM 441 319219 - 319196 - g 75 -3.4 -5.5208 | gap 1, overlap 319200 CTAGAATAGAAAAAA TTATTTCTTTG CTC CAAA-AAATAA GCGATTCTGAAACCA secA 317518 - 320025 + | preprotein translocase subunit SecA prfB 320029 - 321141 + | peptide chain release factor 2 TERM 442 321251 - 321267 + F 71 -3 -5.63236 | GAATAAATATTTCCC CCAAAG ACTTG TTTTGG TTTTTCTTTTTGGCT TERM 443 321424 - 321444 + F 77 -5.6 -5.055 | ATCTTTCACCTTAAT TAAAATCT CCAAA AGATTTTA TTTTTTAAGAATTCA TERM 444 321820 - 321808 - g 75 -3.4 -5.49729 | overlap 321813 AAGTATTTAAAAAAA GCAA ATTTG TTGC AAAAAATAAAACTAA rpsP 321585 - 321848 + | 30S ribosomal protein S16 TERM 445 321938 - 321950 + G 72 -4.9 -4.8543 | TAACTATTTTTCCGT CTTTT TTT AAAAG TTTTTGTGAAACTTC trmD 321907 - 322635 + | tRNA (guanine-N1) -methyltransferase rplS 322678 - 323034 + | 50S ribosomal protein L19 TERM 446 323669 - 323682 + GF 71 -6.7 -3.9716 | overlap 323667 AAATCTGATGCCCTA GGAGT TAGT ACTCC TCTTTTGTTAAATTC TERM 447 324027 - 324005 - gf 71 -4.2 -5.09426 | opp_overlap 324008, overlap 324008 TCTAATGCTAAAAAA GAATCTTTCC AAG AGAAAGATTT TATTTTATTGCAAAA TERM 448 324008 - 324024 + GF 80 -5.2 -5.27476 | opp_overlap 324008 324005 AATGCTAAAAAAGAA TCTTTC CAAGA GAAAGA TTTTATTTTATTGCA TERM 449 324024 - 324008 - gf 75 -5.9 -4.63993 | opp_overlap 324008, overlap 324005 AATGCTAAAAAAGAA TCTTTCC AAG AGAAAGA TTTTATTTTATTGCA TERM 450 324247 - 324231 - gf 71 -8.1 -3.24708 | overlap 324229 324227 TATTTGGTAAATATA TCCTTTT AAA AAAAGGA AAAAAAAATAACGCT tyrS 322985 - 324277 + | tyrosyl-tRNA synthetase csdB 324355 - 325575 + | cysteine desulfhydrase iscU 325577 - 326020 + | IscU protein TERM 451 326065 - 326013 - T 100 -22.7 -5.9218 | opp_overlap 326013 326029, overlap 326014 CACACAATAAAAAAA GTTATTAAATAAAAAAGACAACCTT TTT AAGGTTGTCTTTTTTATTTAATAAA TATATAAATCAAAAT TERM 452 326013 - 326065 + T 100 -22.7 -2.91383 | opp_overlap 326013 326014, overlap 326029 CACACAATAAAAAAA GTTATTAAATAAAAAAGACAACCTT TTT AAGGTTGTCTTTTTTATTTAATAAA TATATAAATCAAAAT TERM 453 326064 - 326014 - T 100 -26.2 -4.12868 | opp_overlap 326013 326029, overlap 326013 ACACAATAAAAAAAG TTATTAAATAAAAAAGACAACCTT TTT AAGGTTGTCTTTTTTATTTAATAA ATATATAAATCAAAA TERM 454 326029 - 326049 + T 100 -12.7 -5.68438 | opp_overlap 326014 326013, overlap 326013 TTATTAAATAAAAAA GACAACCTT TTT AAGGTTGTC TTTTTTATTTAATAA trpS 327090 - 326074 - | tryptophanyl-tRNA synthetase polC 331909 - 327191 - | DNA polymerase III alpha subunit TERM 455 328076 - 328092 + g 74 -6.7 -4.41348 | ATTTTGTTTAGTTGT TGTTAAA TCT TTTAACA TTTGTTTGACAAAAA TERM 456 328258 - 328248 - G 72 -6.8 -4.07568 | opp_overlap 328248 328249, overlap 328249 TGGGCTCTTGTAAAA GGGA AAT TCCC TGAATTTTCTTTAAC TERM 457 331830 - 331858 + g 90 -3.2 -6.15828 | opp_overlap 331844, overlap 331844 ATTTTTTTTACTTGA GGATTTTGAAAA TATTT TTTGCAAAAACC TTTTTTTTTGATAAA TERM 458 332024 - 331976 - R 100 -23.9 -5.00616 | opp_overlap 331976, overlap 331981 331991 TCGTTTTTTAAAAAA TAAAACAAATAAAAATTACATGA AAT TCATGTAATTTTTATTTGTTTTA TTTTTTTTCATAGAT TERM 459 331976 - 332024 + r 100 -23.9 -5.86965 | opp_overlap 331976 331981 331991 TCGTTTTTTAAAAAA TAAAACAAATAAAAATTACATGA AAT TCATGTAATTTTTATTTGTTTTA TTTTTTTTCATAGAT TERM 460 332019 - 331981 - R 100 -19.4 -5.42198 | opp_overlap 331976, overlap 331976 331991 TTTTAAAAAATAAAA CAAATAAAAATTACATGA AAT TCATGTAATTTTTATTTG TTTTATTTTTTTTCA TERM 461 332009 - 331991 - R 100 -9 -5.59962 | opp_overlap 331976, overlap 331981 331976 TAAAACAAATAAAAA TTACATGA AAT TCATGTAA TTTTTATTTGTTTTA AYWB_314 333282 - 332335 - | hypothetical protein TERM 462 332790 - 332778 - G 91 -7.7 -5.36965 | CAATACCATAAAAAA CAAGC ATT GCTTG GGCAGCTACAGGAAT glnP 335194 - 333305 - | ABC-type amino acid ABC transporter, permease component TERM 463 333930 - 333909 - G 70 -2.3 -5.49234 | ATAGCTAATAAAAAA CCAATAATA AGAC TATCAATGG CTAAAATTAAAGTAG TERM 464 335014 - 335041 + g 74 -2.2 -5.71712 | gap 1, overlap 335015 TGTTGTTAACTCCTA C-TTTTAAAATGA TTT TCTTTTTAAAATG TTTTTTTATATGAAA TERM 465 335015 - 335039 + g 72 -5.9 -4.50122 | overlap 335014 GTTGTTAACTCCTAC TTTTAAAATGA TTT TCTTTTTAAAA TGTTTTTTTATATGA TERM 466 335322 - 335311 - R 89 -4.4 -6.17669 | opp_overlap 335311 335306, overlap 335303 AACAAAATAAAAAAA GTCT TTGC AGAC TTTTCTTTGGGATTT argS 337178 - 335373 - | arginyl-tRNA synthetase TERM 467 335545 - 335567 + g 70 -4.8 -4.7657 | overlap 335544 335547 TTTAACGTGTATCTT GCCAAAATGC TTG GCATATTGTC TTTTTGGGCTTTTTG TERM 468 335941 - 335953 + g 79 -4.9 -5.44119 | GTAGTAAATTTGTGA TTTCT AGT AGAAA TTTTTTTCCCATCCA TERM 469 336785 - 336799 + g 70 -5.7 -4.38313 | TAATTAATATTTTGT GAGCT AATGA AGCTC TTTTAAGTTTGATAT TERM 470 337292 - 337267 - R 78 -4.1 -5.79588 | TTAAAATTAAAAAAA CAACCCTTT AATTTGCA AAAGAGTTG TTAAATAATAAATTA TERM 471 337635 - 337617 - R 80 -7.6 -4.49937 | opp_overlap 337616 TTAACAATATTAAAA TTCTAAAA TAG TTTTAGAA AATATTTTAATAAAC nfo 338599 - 337721 - | endonuclease IV TERM 472 338434 - 338448 + g 78 -5.8 -4.99435 | overlap 338445 TGTTTTGGGCAATTT TTAAAG CTT CTTTAA TTTTTAATTCTTCGG srmB 340056 - 338683 - | superfamily II DNA/RNA helicase TERM 473 339145 - 339133 - G 81 -2 -6.06723 | TCTGTGAAAAAAAAA TTCA AGGTG TGAA GGTAAGTTGTAATGG TERM 474 339954 - 339966 + g 70 -4.8 -4.6902 | overlap 339934 TAGGAGCAATTCCTA CCAG ATTAC CTGG TTTTTCAAATTGTGA TERM 475 340111 - 340130 + r 70 -5.2 -4.81212 | opp_overlap 340111, overlap 340101 340106 TTTTGTAATTTAGAA TTATTTTA GTAA TAAAATAA TTTTGTTGTAATAAA AYWB_319 340470 - 340198 - | hypothetical protein TERM 476 340303 - 340286 - G 90 -3.5 -5.95286 | overlap 340297 ATTAAAAAGAAAAAA CAAAACA ATAA TGTTTTA AAACAAAGTAATAAA TERM 477 340529 - 340510 - H 76 -4.4 -5.47431 | opp_overlap 340504 340510 CTAAGATATAAAAAA CTATTTTC ATTA AAAAATAG TTTTTATCTTTATAT TERM 478 341115 - 341097 - H 76 -4.7 -5.40072 | opp_overlap 341109, overlap 341081 341109 GTTTTTTTAAAAAAA TAACAAA TAAAC TTTGTTA CAAATTAACTTTATT TERM 479 341308 - 341259 - H 93 -11.3 -3.9163 | opp_overlap 341258 341260 341264 341268 AAATTATATAGTAAA TTTTTTGTTTTATAAAAATATAA TTAT TAATTTTTTTATAAAACAAAAAA CTAAATTAACAACAA AYWB_320 341404 - 342099 + | hypothetical protein TERM 480 342913 - 342929 + G 70 -2.3 -5.49729 | TTTGACCAAACCCAC CCAAA AAGAGAC TTTGG TTTTTTTAACTGCTT lig 342215 - 344230 + | NAD-dependent DNA ligase AYWB_322 344300 - 345319 + | hypothetical protein TERM 481 345476 - 345493 + G 83 -7.7 -4.66264 | opp_overlap 345473 345476 345490 TTTTAGCAGGAAGAT GGGCTTC TAAA GAAGCTC TTTTTAAAGCTTTTC acpS 345316 - 345696 + | holo-[acyl-carrier-protein] synthase hcaD 345845 - 347188 + | NADH oxidase H2O2-forming AYWB_325 347208 - 347372 + | hypothetical protein sodA 347369 - 347977 + | superoxide dismutase nusB 347984 - 348400 + | N utilization substance protein B TERM 482 348442 - 348462 + F 100 -9.8 -6.32976 | opp_overlap 348442 AAATAATTTTTTAAA GACCTTTC TAATT GAAAGGTC TTTTTTTATTTTTTT TERM 483 348462 - 348442 - f 82 -9.8 -3.59649 | opp_overlap 348442 AAATAATTTTTTAAA GACCTTTC TAATT GAAAGGTC TTTTTTTATTTTTTT AYWB_328 348453 - 348608 + | hypothetical protein TERM 484 348765 - 348746 - f 84 -5.2 -5.82316 | opp_overlap 348746 AGCAGTTAAAAAAAA TAAATAAA ATAA TTTATTTA ATATTCATTTAACCC AYWB_329 348815 - 349672 + | hypothetical protein TERM 485 349747 - 349765 + F 72 -8.2 -3.48529 | opp_overlap 349747 349750, overlap 349746 AAAAAAACAAATTAA GATCAACT TTA AGTTGGTC CTTTTTGCTACTTAT TERM 486 350100 - 350075 - g 72 -4.7 -4.81843 | opp_overlap 350075 AACAATTAAAAGAAA GGCAAAAATGC ATCC GCAATTTTTCC ATTATCGCCCACATT lepA 350050 - 351867 + | GTP-binding protein LepA TERM 487 351905 - 351925 + F 100 -6.9 -5.67711 | opp_overlap 351897 351905 AGAATATTTAAAAAA CTCCTTTTA ATA TATAAGGAG TTTTTGTTTTATTTA TERM 488 351925 - 351905 - f 87 -6.9 -5.17054 | opp_overlap 351905, overlap 351897 AGAATATTTAAAAAA CTCCTTTTA ATA TATAAGGAG TTTTTGTTTTATTTA TERM 489 352965 - 352951 - g 100 -7.2 -6.07969 | overlap 352941 TAAAATTAAAAAAAA CTTTTC AAG GAAAAG CAAATAAAGTCATTG tldD 352695 - 354077 + | TldD protein TERM 490 354786 - 354776 - g 84 -4 -5.75945 | opp_overlap 354776 ATGGGCGAAAAAAAA TTAG GAT CTAA ATCTTTGGTATCTCA pmbA 354074 - 355450 + | PmbA protein TERM 491 355576 - 355532 - T 100 -23.5 -2.73123 | opp_overlap 355532 355545, overlap 355545 AAAACCTTTTAATTA TTTATATAAAAAACACCATCT TAA AGATGGTGTTTTTTATATAAA TAATTAAACAACAAA TERM 492 355532 - 355576 + T 100 -23.5 -2.70932 | opp_overlap 355532 355545, overlap 355545 AAAACCTTTTAATTA TTTATATAAAAAACACCATCT TAA AGATGGTGTTTTTTATATAAA TAATTAAACAACAAA TERM 493 355545 - 355563 + T 100 -11.8 -5.38047 | opp_overlap 355532 355545, overlap 355532 TATTTATATAAAAAA CACCATCT TAA AGATGGTG TTTTTTATATAAATA TERM 494 355563 - 355545 - T 100 -11.8 -5.38047 | opp_overlap 355545 355532, overlap 355532 TATTTATATAAAAAA CACCATCT TAA AGATGGTG TTTTTTATATAAATA lon 357955 - 355580 - | ATP-dependent protease La tig 359334 - 358039 - | trigger factor, PPIase TERM 495 358389 - 358415 + g 72 -7.4 -4.05714 | opp_overlap 358405, overlap 358401 TTTGGAGGTGAGTTT TTTCTTGGGAAA TAA TTTCCTGAGGAA TTTGTAATTCGGAAT TERM 496 358616 - 358632 + g 70 -2.3 -5.4833 | overlap 358623 TTGATTTGGTGTAGA GTTACTT TAA AAATAAC TTTTTTATTAGCTAG TERM 497 358787 - 358797 + g 73 -5.4 -4.72272 | opp_overlap 358796 TTTTTGGCAGTGCCG CCTT CAA AAGG TTTTTCATCAACAAA AYWB_335 359844 - 359689 - | hypothetical protein uvrA 362858 - 359940 - | excinuclease ABC subunit A TERM 498 361482 - 361494 + g 72 -3.5 -5.3321 | overlap 361481 AATTGATAAATCAGT TATTT CAT AAATA TTTTTGTTATTGATT TERM 499 361540 - 361550 + g 80 -5.4 -5.32608 | CCTTGATTAAGTCTT TGTC CTT GACA TTTTTTGCATTTTTT TERM 500 362454 - 362470 + g 74 -6.7 -4.35085 | CATTTGTTCGATGGT TTGTTTT TCT AAAACAA TATTTTTTTCAGGAT AYWB_337 363479 - 363646 + | hypothetical protein AYWB_338 363812 - 364105 + | hypothetical protein TERM 501 364446 - 364466 + T 81 -4 -6.00086 | opp_overlap 364416 364414 364448, overlap 364448 364448 CTTTTAAAATAAAAA AACTCTCT ATAAG AGAGAGTC TTTTTTTTGTAATAT TERM 502 364462 - 364448 - T 100 -8.6 -6.09196 | opp_overlap 364446 364448 364448, overlap 364414 TTTAAAATAAAAAAA CTCTCT ATA AGAGAG AGTCTTTTTTTTGTA TERM 503 364448 - 364462 + T 71 -8.6 -2.59737 | opp_overlap 364414 364448, overlap 364448 364446 TTTAAAATAAAAAAA CTCTCT ATA AGAGAG AGTCTTTTTTTTGTA TERM 504 364448 - 364464 + T 77 -6.6 -4.6341 | opp_overlap 364414 364448, overlap 364446 364448 TTTAAAATAAAAAAA CTCTCT ATAAG AGAGAG TCTTTTTTTTGTAAT AYWB_339 365359 - 364514 - | hypothetical protein TERM 505 365072 - 365060 - G 72 -3.5 -5.36018 | ATCAAAAAAAACAAA TAATA GAT TATTA GGAGGTTCTTTGATA AYWB_340 365770 - 365573 - | hypothetical protein AYWB_341 366357 - 365836 - | hypothetical protein AYWB_342 366763 - 366554 - | hypothetical protein AYWB_343 366979 - 366803 - | hypothetical protein AYWB_344 367425 - 366976 - | hypothetical protein TERM 506 367867 - 367897 + G 74 -8.4 -3.32066 | TTGTTGGAGATGTTT TGGTTCAGTTGTTG GTT TATTAACTGAACCA TTATCAGGGATTGTT AYWB_345 367799 - 368134 + | hypothetical protein TERM 507 368225 - 368241 + T 89 -5.9 -5.48825 | TTACCACCGACATTC GCTATTT TAG AAGTAGC TTTTTTTGAATGATA AYWB_346 368602 - 368357 - | hypothetical protein TERM 508 368781 - 368796 + r 76 -4.8 -5.44119 | AGTTTTTCTCTCTTT CTTTTA GTTT TAAAAG TTTTTTTAAAATAAA TERM 509 368831 - 368816 - R 100 -7.6 -6.09196 | opp_overlap 368816 TTTAAAATAAAAAAA GACTCT ATTT AGAGTC TTTTAATGTTGGTGA TERM 510 368816 - 368831 + r 80 -7.6 -4.44797 | opp_overlap 368816 TTTAAAATAAAAAAA GACTCT ATTT AGAGTC TTTTAATGTTGGTGA AYWB_347 369310 - 368855 - | hypothetical protein AYWB_348 369660 - 369298 - | hypothetical protein AYWB_349 369941 - 369672 - | hypothetical protein AYWB_350 370348 - 370193 - | hypothetical protein AYWB_351 371122 - 370952 - | hypothetical protein AYWB_352 371661 - 371206 - | hypothetical protein TERM 511 371904 - 371876 - R 82 -9.2 -3.87373 | opp_overlap 371882, overlap 371882 371884 371885 TATATTTTTTATAAA TTTAAAGATTTT TATTT AAAATCTTTAAA TAAAATAAGAAATTA TERM 512 371909 - 371885 - R 73 -8.9 -2.71089 | opp_overlap 371882, overlap 371882 371876 371884 TATAAATTTAAAGAT TTTTATTTAAA ATC TTTAAATAAAA TAAGAAATTAAGTTT AYWB_353 375111 - 371923 - | hypothetical protein TERM 513 375669 - 375656 - g 80 -3.9 -5.61881 | opp_overlap 375638 TTTTAAAAATAAAAA GAATT TAGA AATTC GTAATCAATTAATCG AYWB_354 375612 - 375923 + | hypothetical protein AYWB_355 376940 - 377311 + | hypothetical protein AYWB_356 377554 - 377715 + | hypothetical protein AYWB_357 379188 - 378304 - | hypothetical protein TERM 514 378947 - 378967 + g 77 -5.5 -5.011 | opp_overlap 378947 378948, overlap 378948 CTTATAAACTCATAA GGAACATTT TTT AAATGTTCG TTTTCTTCTTTAAGT TERM 515 378966 - 378948 - G 73 -9 -2.69546 | opp_overlap 378948 378947, overlap 378947 TTATAAACTCATAAG GAACATTT TTT AAATGTTC GTTTTCTTCTTTAAG TERM 516 378948 - 378966 + g 80 -9 -3.59033 | opp_overlap 378947 378948, overlap 378947 TTATAAACTCATAAG GAACATTT TTT AAATGTTC GTTTTCTTCTTTAAG AYWB_358 379672 - 379223 - | hypothetical protein TERM 517 379624 - 379603 - G 74 -3.9 -5.20606 | AAACATCAATAAAAA TTTTTAATA TTTG CATTAAAAA ATCAAAAAATGAACT TERM 518 380072 - 380091 + H 100 -7.2 -5.63517 | TTAAAAATTCTTTAA GGCTAACT ATTA AGTTAGTC TTTTTTGTTTCAAGA TERM 519 380119 - 380160 + H 70 -8.3 -3.01791 | opp_overlap 380118 380119, overlap 380108 380124 AGACTGAAAAATAAT TTCATATCTTTTCTAAAAA AATG TTTTTAGAAAGGAATTGAA TGTTAAGACAAAAAT TERM 520 380217 - 380204 - g 84 -3.9 -5.75538 | TTTAAAAAATAAAAA GAATT TAGA AATTC GTAATCAATTAATCG rpoD 380160 - 380786 + | RNA polymerase sigma factor TERM 521 380923 - 380947 + T 79 -5.1 -5.43487 | opp_overlap 380919 CTAACAAAGTATTTT CATTAGACG AAAAAAG TGTCTAATG TTTTTTATATAATTT AYWB_360 381373 - 381167 - | hypothetical protein AYWB_361 381738 - 381379 - | hypothetical protein AYWB_362 381851 - 381693 - | hypothetical protein TERM 522 382046 - 382063 + H 100 -9.9 -6.02914 | opp_overlap 382044 TCAATATTCAAACTT GACCTTC AATT GAAGGTC TTTTTTTTATATCAA TERM 523 382721 - 382709 - g 79 -4.9 -5.40474 | ATCGGGTTAAAAAAA TACAT CCC ATGTA TAAATATATATCTAA AYWB_363 382120 - 382746 + | hypothetical protein AYWB_364 383169 - 383465 + | fragment of Tra5 transposase TERM 524 383915 - 383890 - g 71 -7.1 -3.70741 | overlap 383888 AAAGTCCAACAAACA CTAATTAAAAA AGGT TTTTTAATCAG CATGTCGAGAAAAGC AYWB_365 383530 - 384135 + | hypothetical protein TERM 525 384552 - 384567 + T 70 -4 -5.30686 | gap 1, opp_overlap 384546 384552 TGGGTAAAAGAAAAA GACC-CT GGG AGAGGTC TTTTTTGTGAATATT TERM 526 384567 - 384552 - T 73 -4 -5.45802 | gap 1, opp_overlap 384552, overlap 384546 TGGGTAAAAGAAAAA GACC-CT GGG AGAGGTC TTTTTTGTGAATATT AYWB_366 384963 - 384610 - | hypothetical protein AYWB_367 385379 - 385077 - | hypothetical protein AYWB_368 385863 - 385372 - | hypothetical protein TERM 527 385936 - 385955 + r 71 -7.2 -3.8372 | GAAATTTTAATAATT GATGTTGA TTAT TCAACGTC TTCTGTTATTAGAGT AYWB_369 386340 - 385948 - | hypothetical protein TERM 528 386382 - 386409 + r 73 -5 -5.02715 | overlap 386386 AGAATCATCAGGTTG TTTTGAAGAAGA ACCT TCTTCTTTTAAA TTTTTCGTTTCCTCT AYWB_370 386723 - 386358 - | hypothetical protein TERM 529 386386 - 386402 + g 90 -9.5 -4.49644 | overlap 386382 TCATCAGGTTGTTTT GAAGAAG AAC CTTCTTC TTTTAAATTTTTCGT TERM 530 386477 - 386487 + g 71 -2.6 -5.53288 | TTTCTAAAATTTTTA TAAT TTC ATTA TTTTTTTCAATTGAA AYWB_371 387349 - 386744 - | hypothetical protein TERM 531 386920 - 386931 + g 81 -3 -5.89921 | ATTCATCTTGGGGGT TAAG TTGG CTTA TTTTTTTATTATAAT AYWB_372 388006 - 387455 - | hypothetical protein AYWB_373 388939 - 388217 - | hypothetical protein AYWB_374 389553 - 388942 - | hypothetical protein AYWB_375 390071 - 389598 - | hypothetical protein TERM 532 390158 - 390176 + r 81 -8.2 -4.36485 | opp_overlap 390158, overlap 390149 TTCTAACAAAAAAAA GACCAATT AAT GATTGGTC TTTTGGATGTTTTAT TERM 533 390176 - 390158 - R 100 -7.5 -6.09888 | opp_overlap 390158 390149 TTCTAACAAAAAAAA GACCAAT TAATG ATTGGTC TTTTGGATGTTTTAT AYWB_376 390799 - 390191 - | hypothetical protein TERM 534 390660 - 390672 + g 81 -2 -5.95449 | AAAAAAGGAAGATTG TTCA TTAAT TGAA TTTTTTCTTTTCTTT himA 391401 - 391111 - | DNA-binding protein HU ssb 391917 - 391582 - | single-stranded DNA binding protein dam 392835 - 391951 - | adenine-specific methyltransferase TERM 535 392995 - 393021 + r 100 -8.9 -5.77856 | opp_overlap 392995 393001, overlap 393001 TTTCCTTTCTTAATA TAAAAAGACCT TATTC GGGTCTTTTTA TTTTTTTAATTTATT TERM 536 393021 - 392995 - R 70 -8.2 -3.01712 | opp_overlap 392995 393001, overlap 393001 TTTCCTTTCTTAATA TAAAAAGACC TTATTCG GGTCTTTTTA TTTTTTTAATTTATT TERM 537 393001 - 393015 + r 76 -3.5 -5.86609 | opp_overlap 393001 392995, overlap 392995 TTCTTAATATAAAAA GACCT TATTC GGGTC TTTTTATTTTTTTAA rpoD 393619 - 393185 - | RNA polymerase sigma factor TERM 538 393287 - 393305 + g 70 -6.8 -3.9978 | ATGCCATGTATGTTT TTCTTCTT GAA AAGAAGGA TTATTGGTTTTATGA TERM 539 393562 - 393575 + g 84 -3.9 -5.75538 | CGATTAATTGATTAC GAATT TCTA AATTC TTTTTATTTTTTAAA TERM 540 393708 - 393689 - H 100 -9.4 -6.09196 | opp_overlap 393667 393691 TTGAAAAGAAAAAAA GACTAACT TAAT AGTTAGTC TTAAAGAATTTTTAA AYWB_381 393853 - 394044 + | hypothetical protein TERM 541 394060 - 394074 + F 100 -7.1 -5.60993 | opp_overlap 394056 394060 TATTAATACAATTAA GTCCC CAAAA GGGAC TTTTTTTATAAACCA TERM 542 394074 - 394060 - f 70 -7.8 -3.55453 | opp_overlap 394060, overlap 394056 TATTAATACAATTAA GTCCCC AAA AGGGAC TTTTTTTATAAACCA TERM 543 394344 - 394330 - g 74 -2.1 -5.66989 | CAAACAGGAAAAAAA CAGTC AAAAG AACTG GTAAAAATTTAAAAA AYWB_382 394105 - 394356 + | hypothetical protein AYWB_383 394632 - 395084 + | hypothetical protein AYWB_384 395692 - 395510 - | hypothetical protein AYWB_385 396216 - 395821 - | hypothetical protein TERM 544 396041 - 396023 - G 85 -3.1 -5.94713 | opp_overlap 396023 396026, overlap 396026 ATGGTATAAAAAAAA GAACTTC TATTT GAAGGTC TTAGTTGTATTTTAT AYWB_386 396410 - 396240 - | hypothetical protein TERM 545 396908 - 396897 - R 95 -5.8 -6.25578 | opp_overlap 396896 ATTAAATAAAAAAAA CCCT AAAA AGGG CCTTGCTTTATGATT AYWB_387 397537 - 397088 - | hypothetical protein TERM 546 397622 - 397647 + r 86 -7.9 -4.8245 | opp_overlap 397631 TATATTTGTTAATTT TTTAAATAATA ATCT TATTATTTAAA TTTATTATTTTTATT AYWB_388 398053 - 397712 - | hypothetical protein TERM 547 398518 - 398531 + H 70 -3.9 -5.19328 | overlap 398514 AATAGTATTTTTTTC TTAGA AATA TCTAA TTTTTATTATAACAT AYWB_389 398713 - 398976 + | hypothetical protein TERM 548 399400 - 399415 + T 71 -3.4 -5.40072 | opp_overlap 399400, overlap 399389 AGTTTTTGTAATTTA TAAATA ATTT TATTTA TTTTTTTCCAACAAC TERM 549 399455 - 399435 - T 100 -10.5 -4.89477 | TTTCCAACAACAAAA GCCGTCTAA TAA TTAGACAGC AAAATTAATTAAAAA AYWB_390 399952 - 399503 - | hypothetical protein TERM 550 399926 - 399911 - G 70 -6.2 -4.17355 | TAATGCCAAAAAAGA TTCTTG AGGA CAAGAA AAACATGTGCGAGAA TERM 551 399991 - 399969 - R 70 -4.9 -4.93296 | opp_overlap 399969 399974 TGACGACTATAAAAA TCAATTCCT TTATT AGGATTTGA TTCAATTTGTTTATC TERM 552 400170 - 400151 - R 84 -5 -5.89827 | opp_overlap 400153, overlap 400153 AACCATTAAAAAAAA TACCAACT TTTA AGTTGGTT TCCTTAAATAATTAA TERM 553 400168 - 400153 - R 81 -7.6 -4.5787 | opp_overlap 400153, overlap 400151 CCATTAAAAAAAATA CCAACT TTTA AGTTGG TTTCCTTAAATAATT TERM 554 400153 - 400168 + r 73 -7.6 -3.94404 | opp_overlap 400151 400153 CCATTAAAAAAAATA CCAACT TTTA AGTTGG TTTCCTTAAATAATT AYWB_391 400962 - 400792 - | hypothetical protein AYWB_392 401194 - 400967 - | hypothetical protein TERM 555 401336 - 401352 + r 74 -5.9 -4.42235 | CCAATTATCTTGTTT TTGTTGG GTT TCAACAA TTATTTTTGGAGGTT AYWB_393 401591 - 401346 - | hypothetical protein AYWB_394 401885 - 401598 - | hypothetical protein TERM 556 401840 - 401858 + g 77 -6.2 -4.77036 | opp_overlap 401837 401840, overlap 401837 AACCATCAAAAGTTA TTAAATTA TAA TAATTTAA TTTTTCATAATACAA TERM 557 402294 - 402250 - H 79 -9.8 -3.23393 | gap 1, opp_overlap 402260 402264, overlap 402248 402253 402258 402264 TTTTATGTTATAATA TTATTTAATAGCAATCATTAA TCGC TTAATGATTGCTATTACA-AA GAAGGAAAGGTGTAT TERM 558 402292 - 402253 - H 100 -14 -2.8055 | opp_overlap 402260 402264, overlap 402250 402248 402258 402264 TATGTTATAATATTA TTTAATAGCAATCATTAA TCGC TTAATGATTGCTATTACA AAGAAGGAAAGGTGT TERM 559 402287 - 402258 - H 100 -13.9 -3.14146 | opp_overlap 402260 402264, overlap 402253 402250 402248 402264 TATAATATTATTTAA TAGCAATCATTAA TCGC TTAATGATTGCTA TTACAAAGAAGGAAA TERM 560 402260 - 402285 + H 89 -12.1 -3.01712 | opp_overlap 402258 402253 402250 402248 402264, overlap 402264 TAATATTATTTAATA GCAATCATTAA TCGC TTAATGATTGC TATTACAAAGAAGGA TERM 561 402665 - 402651 - g 73 -2.9 -5.55698 | overlap 402627 CACAAGTTAAAAAAA CTTTT GTTGA AAAAG AATTAAATCAAGTAT TERM 562 403265 - 403251 - g 73 -2.9 -5.55698 | overlap 403227 CACAAGTTAAAAAAA CTTTT GTTGA AAAAG AATTAAATCAAGTAT TERM 563 403865 - 403851 - g 73 -2.9 -5.55698 | overlap 403827 CACAAGTTAAAAAAA CTTTT GTTGA AAAAG AATTAAATCAAGTAT AYWB_395 402278 - 404716 + | hypothetical protein TERM 564 404759 - 404743 - f 100 -9.5 -5.72207 | opp_overlap 404743 TTTAAACTAAAAAAA CTACCTA AAT TAGGTAG TTTTTTATTATATTT TERM 565 404743 - 404759 + F 100 -9.5 -5.66338 | opp_overlap 404743 TTTAAACTAAAAAAA CTACCTA AAT TAGGTAG TTTTTTATTATATTT TERM 566 404861 - 404803 - f 71 -7.1 -3.78992 | gap 1, overlap 404796 404793 404810 CATAATAACAAAAAC GCCAACACGTTTTTTTAGACAA-TTTTA AAGA CAAAAGTTGTCTAAAAAAACGGAACAGC GCAACTTTTTAGGCC TERM 567 404854 - 404810 - f 100 -13.4 -3.18155 | gap 1, overlap 404796 404793 404803 ACAAAAACGCCAACA CGTTTTTTTAGACAA-TTTTA AAGA CAAAAGTTGTCTAAAAAAACG GAACAGCGCAACTTT TERM 568 405259 - 405249 - f 73 -4 -5.40464 | opp_overlap 405249, overlap 405243 TAGTACAAATAAAAA CTTT TTA AAAG TGATTTATTTTAACT AYWB_396 405259 - 405522 + | hypothetical protein nfnB 406474 - 407079 + | nitroreductase TERM 569 407147 - 407167 + F 85 -4.7 -5.93809 | overlap 407165 CAAAAATAACATTAT GGCTGACTT AAA AAGTTGGTC TTTTTTTTATAAAAA TERM 570 407493 - 407524 + F 100 -13.4 -4.3467 | opp_overlap 407493 TTAGTATTTAGAAAA CAATAGATTATATT CCTT AATATAATCTATTG TTTTGCTATCAGGAT TERM 571 407524 - 407493 - f 100 -13.4 -4.43844 | opp_overlap 407493 TTAGTATTTAGAAAA CAATAGATTATATT CCTT AATATAATCTATTG TTTTGCTATCAGGAT uvrC 408194 - 409963 + | excinuclease ABC subunit C TERM 572 411052 - 411042 - g 82 -8.2 -4.56914 | GCACTCAAAGGAAAA GGCG AGG CGCC ATCCACTTTAATTGA uvrB 410082 - 412085 + | excinuclease ABC subunit B TERM 573 412576 - 412607 + T 93 -8 -5.23316 | opp_overlap 412576 412574, overlap 412578 TTAAACACAAAACTA CTCCTTTACTGAGA TAGT TCACGGTAAAGGCG TTTTTTGGTATAATA TERM 574 412578 - 412605 + T 74 -9.2 -2.82658 | opp_overlap 412576 412574, overlap 412576 AAACACAAAACTACT CCTTTACTGAGA TAGT TCACGGTAAAGG CGTTTTTTGGTATAA TERM 575 412852 - 412869 + T 73 -4.3 -5.50925 | GACTATTATTAAATT TAATTAT TTTC ATAATTA TTTTTTATATTCCTT TERM 576 413493 - 413477 - T 70 -4.5 -5.093 | opp_overlap 413477 TTTAAAATAATAAAA CTAAAAA TCA TTTTCAG TATCATCAATATATT AYWB_400 413629 - 413477 - | hypothetical protein TERM 577 413607 - 413634 + g 100 -10.1 -5.4659 | opp_overlap 413610 413613 AAACTTTGGTGGCAA CAATAATGCAA TTTTCT TTGCATTATTG TTTTTGTTTATGTTA AYWB_401 413870 - 414022 + | hypothetical protein AYWB_402 414118 - 414435 + | hypothetical protein TERM 578 414535 - 414514 - f 74 -6.1 -4.4836 | CAAGAAAATGCAAAA TTTATTTTT TAAA AAAAATAAA AAGGATTAAAATAAA AYWB_403 414551 - 414727 + | hypothetical protein AYWB_404 415119 - 415574 + | hypothetical protein TERM 579 415818 - 415771 - f 74 -2.2 -5.9362 | TAAAATATAAAAAAA TAGTTATATAAATCAAAGTCCT ACCA AAAACAACGTTTTATATAACTA CCATGAAAGGATGCA AYWB_405 415840 - 416205 + | hypothetical protein TERM 580 416232 - 416212 - f 71 -5.6 -4.64861 | opp_overlap 416211, overlap 416208 CTTTTTTAAAATAAA TATAAATC ATTTA GATTTATA ATGGTTGATGCATGG AYWB_406 416629 - 416832 + | hypothetical protein AYWB_407 416888 - 417043 + | hypothetical protein AYWB_408 418424 - 417645 - | hypothetical protein TERM 581 418664 - 418708 + r 70 -4 -5.1925 | gap 1, opp_overlap 418671 418677, overlap 418671 418677 TGGAAATAAAAATAC TG-ATTAATTAAAACAATATT TTAA AATATTGTTTTAATTCTTGCA TTTTTTAAATTCTCC TERM 582 418671 - 418700 + r 93 -11.1 -3.87569 | opp_overlap 418671 418677, overlap 418664 418677 AAAAATACTGATTAA TTAAAACAATATT TTAA AATATTGTTTTAA TTCTTGCATTTTTTA TERM 583 418700 - 418671 - R 86 -11.1 -3.25312 | opp_overlap 418664 418671 418677, overlap 418677 AAAAATACTGATTAA TTAAAACAATATT TTAA AATATTGTTTTAA TTCTTGCATTTTTTA TERM 584 418677 - 418694 + r 71 -5.7 -4.56736 | opp_overlap 418671 418677, overlap 418671 418664 ACTGATTAATTAAAA CAATATT TTAA AATATTG TTTTAATTCTTGCAT hflB 420835 - 418730 - | ATP-dependent Zn protease TERM 585 420636 - 420648 + g 84 -4.1 -5.85178 | overlap 420637 TTATTTTCATTAATT TTAGC TTC GCTAG TTTTTTTTAACTCTT TERM 586 420806 - 420823 + g 72 -5.7 -4.61284 | opp_overlap 420806 ACCACATACAACTAA CAAATTT AAAT AAATTTG TTTTAATTTCATATT TERM 587 421642 - 421630 - R 71 -3.5 -5.36018 | ATTAAAAAAAATAAA TATTA TTA TAATA AAGAAAAGCTAAATT AYWB_410 422757 - 422602 - | hypothetical protein AYWB_411 423375 - 423160 - | hypothetical protein TERM 588 423316 - 423340 + g 71 -4.5 -4.84527 | opp_overlap 423315 423329, overlap 423317 423333 TGTTTTTTGATATAT TTTTTTTAAAA AAC TTTTGAAAAAG TTTTTCATCTGTACC TERM 589 423561 - 423544 - H 70 -4.1 -5.25772 | opp_overlap 423538 423538 423536 423544, overlap 423538 AAACTATAAGAAAAA CCCTTAT CAAA AAAAGGG TTTTTGCTGTTGTTT TERM 590 423915 - 423898 - H 100 -9.9 -5.58454 | opp_overlap 423895 TGTATATTAAAAAAA GAGGCTT TTTT AAGCCTC TCAATAATTTTATTT lplA 423992 - 425008 + | lipoate-protein ligase A TERM 591 425613 - 425603 - g 76 -4 -5.52986 | opp_overlap 425603 ACTTTACCAAAAAAA CTTT TTT AAAG TGGTTCATGCAAAGC AYWB_413 425092 - 425775 + | hypothetical protein TERM 592 425799 - 425777 - f 77 -8 -3.97209 | CCAAGGAACATTAAA TTTTAAAAAA TCT TTTTTTAAAA TCCCAACAAAATAAT hflB 425903 - 427156 + | ATP-dependent Zn protease TERM 593 427186 - 427208 + T 83 -3.5 -6.17669 | opp_overlap 427186 427171, overlap 427173 TAAAATATAAAAAAA GTTAACTGA GAAAA TAAGTTAAC TTTTTTTATTTTATT TERM 594 427208 - 427186 - T 79 -3.5 -5.9362 | opp_overlap 427173 427186, overlap 427171 TAAAATATAAAAAAA GTTAACTGA GAAAA TAAGTTAAC TTTTTTTATTTTATT AYWB_415 428575 - 427223 - | dimethyladenosine transferase TERM 595 427505 - 427516 + g 73 -3 -5.43866 | overlap 427514 TTTTATTTGGTCTAG CAAA ATTT TTTG TTTTTTTAACAATTC TERM 596 428671 - 428645 - H 79 -2.5 -6.28401 | opp_overlap 428645 CAAAAAAGAAAAAAA TTAAGTTAATA AAAAA TATTAAATTAA AATTATTTTGTTATT TERM 597 429964 - 429977 + G 82 -5.3 -5.38951 | opp_overlap 429964 429962 GAAGGCAAAAAACTA GGTTT AGAA AAACC TTTTTTATATAAATT TERM 598 431379 - 431389 + G 74 -4 -5.29782 | AGTTATCAAATTTTT TATG AAT CATA TTTTTTATAAATATC alaS 429028 - 431622 + | alanyl-tRNA synthetase AYWB_417 431759 - 431959 + | hypothetical protein yqgF 431953 - 432408 + | Holliday junction resolvase TERM 599 433020 - 432994 - g 86 -4.6 -5.78622 | TTATCTCAAAAAAAA TTTAGTAATTTT GAA AAAACCACCAAA AAAATAAAAAAAGAA smtA 432410 - 433027 + | SAM-dependent methyltransferase TERM 600 433125 - 433103 - g 72 -5 -4.90519 | AAATTAAAAAAAGAA TTAACTTTTT TAA AAGAAGTTAA AAGAAAAGAAAATTT greA 433046 - 433516 + | transcription elongation factor GreA AYWB_421 433506 - 434075 + | hypothetical protein AYWB_422 434062 - 434268 + | hypothetical protein AYWB_423 434353 - 434586 + | hypothetical protein asm 434583 - 435143 + | N6-adenine-specific methylase TERM 601 435237 - 435247 + G 70 -3.2 -5.32699 | overlap 435242 TTTTTATTAGGTGGA GCTT TCG GAGC TTTTTTAATGTTTCG AYWB_425 435183 - 435398 + | hypothetical protein AYWB_426 435403 - 435747 + | hypothetical protein TERM 602 435797 - 435817 + T 100 -8.4 -5.60689 | opp_overlap 435797 TTATATAATAAAAAA CACCTTTT ATAAC AAAAGGTG TTTTTTATTATATAA TERM 603 435817 - 435797 - T 100 -9.1 -5.60689 | opp_overlap 435797 TTATATAATAAAAAA CACCTTTTA TAA CAAAAGGTG TTTTTTATTATATAA AYWB_427 436273 - 435845 - | hypothetical protein plsC 437183 - 436374 - | 1-acyl-sn-glycerol-3-phosphate acyltransferase TERM 604 437050 - 437036 - G 71 -4.4 -4.90477 | GACAAAAAACCAAAA TTATAA ACG TTATAA AAAAAGACAACAACA folA 437668 - 437177 - | dihydrofolate reductase TERM 605 437422 - 437412 - G 71 -4 -5.02074 | TCACTTTCCAAAAAA GATT GCA AATC AGAAACTACAGTAAA TERM 606 437537 - 437568 + g 71 -2.4 -5.46629 | gap 1, overlap 437538 AGATTTATAAGTTTC ATACCC-CATTAAAA CAT TTTTATTGAGGGTAA TTTTTTTAAAATATT thyA 438531 - 437665 - | thymidylate synthase pepD 439951 - 438575 - | dipeptidase PepV TERM 607 440315 - 440295 - H 75 -2.7 -5.94743 | opp_overlap 440295 440297 440297, overlap 440297 TAAAAAAAAGAAAAA TATTTTTTT TAT AAAAAAAAA GTGTTTCTTTTTCGT TERM 608 440315 - 440297 - H 74 -6.2 -4.51984 | opp_overlap 440295 440297 440297, overlap 440295 AAAAAAAGAAAAATA TTTTTTTT ATA AAAAAAAA GTGTTTCTTTTTCGT TERM 609 440539 - 440523 - g 72 -5.9 -4.4831 | opp_overlap 440523 440523 ATTTACCAAAAACAA CCTTGTT TAA AACAAAG GTTTATTTATTGTTT TERM 610 440576 - 440590 + G 70 -5.8 -4.43911 | ATTATTACTTTTGAT CTTATT TGT AATAAG TTTTAATTGCACTTT AYWB_432 440499 - 441515 + | hypothetical protein TERM 611 441552 - 441524 - f 89 -6.1 -5.33848 | opp_overlap 441531 441547, overlap 441531 441542 441543 ATCATAATTAAAAAA TATCAAAGAGGTT TAT AACCTCTTTTTTA TTTTATATTTATAAA TERM 612 441545 - 441531 - f 81 -8.6 -4.18668 | opp_overlap 441531, overlap 441524 441542 441543 TTAAAAAATATCAAA GAGGTT TAT AACCTC TTTTTTATTTTATAT TERM 613 441531 - 441545 + F 100 -8.6 -5.8901 | opp_overlap 441531 441524 441542 441543 TTAAAAAATATCAAA GAGGTT TAT AACCTC TTTTTTATTTTATAT TERM 614 442282 - 442319 + G 81 -2.1 -5.98781 | overlap 442283 TCAAATTAACTTTTC TTATGGTTTGTATAATT CTCA AATTATCCAATCCACAG TTTTTTTTGATTCTC AYWB_433 441608 - 442813 + | hypothetical protein TERM 615 442845 - 442820 - T 100 -10.6 -5.91981 | opp_overlap 442820 AAAATTTAAAAAAAA CAGTAGATTG TAAATT CAATCTACTG TTTTTTAATATTTAT TERM 616 442820 - 442845 + T 100 -10.6 -5.34055 | opp_overlap 442820 AAAATTTAAAAAAAA CAGTAGATTG TAAATT CAATCTACTG TTTTTTAATATTTAT pykF 444212 - 442872 - | pyruvate kinase citS 445650 - 444283 - | citrate-sodium symport gpmI 447364 - 445826 - | phosphoglyceromutase TERM 617 447408 - 447389 - R 79 -7.9 -4.34402 | opp_overlap 447389 CTCCTTACATCAAAA GACCATC TTAAAC GATGGTC TTGTCAACAATAATG TERM 618 447389 - 447408 + r 71 -7.9 -3.30441 | opp_overlap 447389 CTCCTTACATCAAAA GACCATC TTAAAC GATGGTC TTGTCAACAATAATG eno 448738 - 447446 - | enolase TERM 619 448450 - 448476 + g 74 -6.8 -4.30719 | opp_overlap 448460 TGGGAGTTCCGTCAA CTTTAATTAATA ATT TATCAATTAAAG TTTGTTCTAAGACAG pgi 450187 - 448907 - | glucose-6-phosphate isomerase TERM 620 449699 - 449719 + g 77 -4.7 -5.33331 | overlap 449701 TACAAAAATACGATT TTTGGCAAG TTG TTTGCCATA TTTTTCTTCTATTTC TERM 621 449701 - 449717 + g 76 -7.3 -4.26142 | overlap 449699 CAAAAATACGATTTT TGGCAAG TTG TTTGCCA TATTTTTCTTCTATT norM 451811 - 450303 - | Na+ driven multidrug efflux pump TERM 622 450641 - 450630 - G 81 -3 -5.76633 | CCATACAGAAAAAAA CAAA GAAG TTTG TTCCCAATTGAGGAT TERM 623 451484 - 451474 - G 82 -5.4 -5.45652 | opp_overlap 451462 451474 ATTGCCAATAAAAAA GCTA GGG TAGC ATATTGTTTGGCTTT pfkA 452922 - 451936 - | 6-phophofructokinase TERM 624 453668 - 453658 - H 79 -2.6 -6.17669 | AAGAAAACAAAAAAA TTTA AAC TAAA TAATCCTAAAAATTT norM 453835 - 455430 + | Na+ driven multidrug efflux pump TERM 625 455465 - 455448 - T 100 -8.5 -5.42514 | opp_overlap 455448 TCATAAATCAAAAAA GACTATC AATT GATAGTC TTTTTTTGTTATATA TERM 626 455448 - 455465 + T 100 -8.5 -5.9218 | opp_overlap 455448 TCATAAATCAAAAAA GACTATC AATT GATAGTC TTTTTTTGTTATATA topA 457485 - 455542 - | DNA topoisomerase TERM 627 456268 - 456287 + g 71 -4.4 -4.86033 | opp_overlap 456268, overlap 456269 ACCATCTTGCAAAAG TTTTTGAT AGCC ATCAAAAG TTTTTATCAAACTTT TERM 628 456856 - 456868 + g 72 -6.3 -4.43012 | TTGGGCTTTGATTTT TCCTT TGT AAGGA TTTTGGTATTCCGCT AYWB_443 458467 - 457580 - | GTP-binding protein TERM 629 458010 - 458020 + g 91 -4 -5.93809 | CCTGCTAAATTAGCT GTTT TTA AAAC TTTTTTTTGTGCAAA AYWB_444 459261 - 458497 - | hypothetical protein TERM 630 458829 - 458849 + g 77 -5.5 -5.09259 | opp_overlap 458829 TTCTTTTTAAAGTCA TTTTGCGAA ACA TTCTCAAAA TTTTGTTTTGGAATA TERM 631 459463 - 459449 - R 72 -2.8 -5.86976 | TGATAAAACAAAAAA GCAGTT TAA AAATGC AAAAAAATAAGGTTT efp 460049 - 459480 - | protein translation elongation factor P miaA 460977 - 460102 - | tRNA delta(2)-isopentenylpyrophosphate transferase TERM 632 460955 - 460968 + g 74 -3.9 -5.25656 | GAAGCAGTAGGACCT GTAAT AGCG ATTAC TTTTTTCATAATTTT AYWB_447 461907 - 461146 - | hypothetical protein TERM 633 461194 - 461216 + g 80 -6.4 -4.86621 | opp_overlap 461200 ATTAGGTTTAAGAGT GACAAGTAAA CCG TTTAATTGTC TTTTTCCTTCGGCAT AYWB_448 463518 - 461932 - | HAD hydrolase TERM 634 462908 - 462930 + g 86 -7.1 -5.12617 | opp_overlap 462898 GAATATTTTTGCATG GCTAAAACT AAAAG AGTTTTGGC TTTTTTGGATGCTTC TERM 635 463947 - 463913 - R 100 -8 -6.20267 | opp_overlap 463920, overlap 463915 463920 GTAAAAATAAAAAAA CTTAAAAGCTAACCTT AAA AAGGTTAGCTTTTGTA ATAAAAAATATTGAA TERM 636 463945 - 463915 - R 91 -12.8 -3.1344 | opp_overlap 463920, overlap 463913 463920 AAAAATAAAAAAACT TAAAAGCTAACCTT AAA AAGGTTAGCTTTTG TAATAAAAAATATTG TERM 637 463920 - 463940 + r 100 -12.7 -4.46212 | opp_overlap 463920 463915 463913 TAAAAAAACTTAAAA GCTAACCTT AAA AAGGTTAGC TTTTGTAATAAAAAA TERM 638 463940 - 463920 - R 100 -12.7 -4.57275 | opp_overlap 463920, overlap 463915 463913 TAAAAAAACTTAAAA GCTAACCTT AAA AAGGTTAGC TTTTGTAATAAAAAA AYWB_449 464291 - 464010 - | hypothetical protein TERM 639 464556 - 464544 - R 76 -3.5 -5.77856 | AATAAATCAAAAAAA TATTT GCA AAATA ATGTTAAAAAGTGGT rmuC 465667 - 464582 - | RmuC family protein TERM 640 465797 - 465815 + H 75 -6.2 -4.56978 | opp_overlap 465801, overlap 465796 465801 TTGAGATTTGTTTTT TAAATATT TTT AATATTTA TTTCTTATTTAGAAA TERM 641 466187 - 466176 - H 71 -3 -5.68438 | CTATTAAATAAAAAA GTTT GCAC AAAC ACAGAAAAAAAGTAT TERM 642 466525 - 466535 + G 71 -4 -5.00616 | opp_overlap 466525 466529, overlap 466529 AAAGAAACAAGCATA TGAA TTT TTCA TTTTTTCAAAAAGAA AYWB_451 466409 - 466561 + | hypothetical protein AYWB_452 466524 - 467219 + | hypothetical protein TERM 643 467982 - 467992 + G 77 -5.4 -5.08824 | opp_overlap 467982 ACAACCAAAAGACCA CAAG AAC CTTG TTTTTTAACTCACAC gidA 467235 - 469139 + | tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA TERM 644 469441 - 469430 - g 81 -3 -5.76949 | CATCTTTAAAAAAAA TCAA TTTC TTGA AACAATTAGCAAGCC gidB 469126 - 469764 + | glucose inhibited division protein B TERM 645 469788 - 469807 + T 100 -10.8 -5.95449 | opp_overlap 469788 AATATAATAAAAAAA GATCACGA ATAT TCGTGATC TTTTTTATTTTCTTT TERM 646 469807 - 469788 - T 100 -10.8 -5.94214 | opp_overlap 469788 AATATAATAAAAAAA GATCACGA ATAT TCGTGATC TTTTTTATTTTCTTT AYWB_455 470600 - 469812 - | hypothetical protein TERM 647 470935 - 470904 - R 100 -6.8 -5.88197 | gap 1, opp_overlap 470907 470913, overlap 470913 GGAAATACAAAAAAA GATAAAAAACCCACA TTA TGTGGG-TTTTTATT TATTAATAAGGTTTC TERM 648 470907 - 470933 + r 95 -11 -4.25458 | opp_overlap 470904 470913, overlap 470913 AATACAAAAAAAGAT AAAAAACCCACA TTA TGTGGGTTTTTA TTTATTAATAAGGTT TERM 649 470927 - 470913 - R 100 -10 -5.72118 | opp_overlap 470907 470913, overlap 470904 AAAAAAGATAAAAAA CCCACA TTA TGTGGG TTTTTATTTATTAAT TERM 650 470913 - 470927 + r 100 -10 -5.48514 | opp_overlap 470913 470904, overlap 470907 AAAAAAGATAAAAAA CCCACA TTA TGTGGG TTTTTATTTATTAAT tufB 472149 - 470965 - | elongation factor Tu TERM 651 472105 - 472118 + g 75 -5.3 -4.97158 | ATGTCCAATAGTACC CACAT TTAA ATGTG TTTTATTTCGTATAA fusA 474383 - 472284 - | elongation factor G TERM 652 473241 - 473252 + g 70 -5.8 -4.38092 | opp_overlap 473240 AACTGCTAAAATATC GCCT GTGT AGGC TTCTTTTACTTCTTC rpsG 474847 - 474377 - | 30S ribosomal protein S7 rpsL 475337 - 474918 - | 30S ribosomal protein S12 rpoC 479419 - 475358 - | DNA-directed RNA polymerase beta' chain rpoB 483244 - 479423 - | DNA-directed RNA polymerase subunit beta TERM 653 481215 - 481227 + g 80 -6.3 -4.94703 | overlap 481211 ATGCCTGTTTCGCCG TTGCT ACG AGCAA TTATTTTTTTATCTT TERM 654 481714 - 481724 + g 76 -4 -5.45726 | opp_overlap 481714 TGCTAGTAGAAATCA TATC TTT GATA TTTTTTTCAGCTCTG TERM 655 481746 - 481760 + g 86 -7.2 -5.06103 | opp_overlap 481746 TCAGCTCTGGTAAGA CCAATT CGA AATTGG TTTTTTAACAATTCT TERM 656 482170 - 482180 + g 76 -4 -5.42862 | TGATGTTAGTTTTGG TGAA TAA TTCA TTTTTTTGAGGATAT TERM 657 483121 - 483150 + g 86 -9.5 -3.78409 | opp_overlap 483105 483128 483132, overlap 483128 483146 CTTTAATACCGTGTT TTAAAAACCAATC AAAA GATTGGTTTTGAA TTTCAATTAAATTGG TERM 658 483143 - 483128 - G 80 -7.6 -4.56775 | opp_overlap 483121 483128, overlap 483132 ACCGTGTTTTAAAAA CCAATC AAAA GATTGG TTTTGAATTTCAATT TERM 659 483128 - 483143 + g 78 -7.6 -4.37198 | opp_overlap 483128 483132, overlap 483121 ACCGTGTTTTAAAAA CCAATC AAAA GATTGG TTTTGAATTTCAATT TERM 660 483390 - 483360 - R 73 -9.3 -2.53642 | gap 1, opp_overlap 483360 483361 483367, overlap 483367 AAAACAATGCAAGAC TA-AAAAACCTGAG AAAA CTCAGGTTTTTATA TTACTTACAAGATAA TERM 661 483360 - 483390 + r 76 -9.3 -3.34344 | gap 1, opp_overlap 483360 483367, overlap 483361 483367 AAAACAATGCAAGAC TA-AAAAACCTGAG AAAA CTCAGGTTTTTATA TTACTTACAAGATAA TERM 662 483361 - 483388 + r 81 -10 -3.24032 | opp_overlap 483360 483367, overlap 483360 483367 AAACAATGCAAGACT AAAAAACCTGAG AAAA CTCAGGTTTTTA TATTACTTACAAGAT TERM 663 483382 - 483367 - R 95 -9 -5.27779 | opp_overlap 483361 483360 483367, overlap 483360 TGCAAGACTAAAAAA CCTGAG AAAA CTCAGG TTTTTATATTACTTA TERM 664 483367 - 483382 + r 95 -9 -5.1485 | opp_overlap 483367 483360, overlap 483361 483360 TGCAAGACTAAAAAA CCTGAG AAAA CTCAGG TTTTTATATTACTTA rplL 483820 - 483410 - | 50S ribosomal protein L7/L12 rplJ 484365 - 483832 - | 50S ribosomal protein L10 TERM 665 484181 - 484197 + g 78 -4.5 -5.47218 | overlap 484183 TTTTTGGGATATACT TTTACTT CGC AAGTAGA TTTTTTTAACTCACG TERM 666 484271 - 484283 + g 89 -6.3 -5.4505 | AAAATAATAACTGTT TTAGC AGT GCTAA TTTTTTCTTGCAAAA rplA 485072 - 484380 - | 50S ribosomal protein L1 rplK 485586 - 485161 - | 50S ribosomal protein L11 nusG 486384 - 485785 - | transcription antitermination protein nusG TERM 667 486140 - 486126 - G 74 -5 -5.08601 | opp_overlap 486126 486127, overlap 486127 TCATTTGAATAAAAA CGTATC CAG GATACA TTTTACGCTCTTTTT secE 486940 - 486386 - | preprotein translocase subunit SecE TERM 668 487086 - 487074 - R 71 -3.4 -5.34632 | AATAAAATACAAAAA TTGC TTTGT GCAA AAAATTATACCGCAA spoU 487938 - 487231 - | 23S rRNA methyltransferase mgtA 490397 - 487944 - | cation transport ATPase TERM 669 488231 - 488215 - G 79 -6.7 -4.68539 | opp_overlap 488215, overlap 488225 AGTAAAATTACAAAA TTAGAAA CTA TTTCTAA TTGTTTGAAATCGGG TERM 670 488215 - 488231 + g 70 -6.7 -3.9392 | opp_overlap 488215 488225 AGTAAAATTACAAAA TTAGAAA CTA TTTCTAA TTGTTTGAAATCGGG TERM 671 488662 - 488644 - G 77 -9.6 -2.7961 | overlap 488647 AAATTAGCAATATTA CAAGTAGC TTG GCTACCTG ATGCCATTGCAATGG TERM 672 488659 - 488647 - G 71 -7.7 -3.53531 | overlap 488644 TTAGCAATATTACAA GTAGC TTG GCTAC CTGATGCCATTGCAA TERM 673 489591 - 489578 - G 70 -2.3 -5.52384 | TGGTCAGCAAAAAAA GCCCC AAAG GAAGC ATTGCTATCATCATG TERM 674 489751 - 489739 - G 72 -6.3 -4.28323 | ATTAACGAAGATAAA CTTTG CAT CAAAG GAGTGATCGGTTTTT pnp 492622 - 490475 - | polynucleotide phosphorylase/polyadenylase TERM 675 490566 - 490590 + g 73 -4.3 -5.12707 | overlap 490574 TTAACCAAAACTGTT TCACCTATTTT TAA AACATCGGTGA TTTTTTGAAATTTCA TERM 676 492423 - 492402 - G 80 -5.9 -5.00616 | gap 1 TCGCGGCGTAAAAAA CTGCCAGGAA TTT TTCC-AGCAG CGTATAATTTTTCTT TERM 677 492600 - 492610 + g 76 -4 -5.43866 | TCTTTTAAATTAGTA GTTT CAA AAAC TTTTTTTAACACTTG TERM 678 492853 - 492823 - H 73 -4.2 -5.40474 | opp_overlap 492827, overlap 492787 ATTTTGTTAAAAAAA TAAGTCAATTAT TGATTGT AAAATTGACTTA ATAAATTAGAAAATA AYWB_471 493710 - 494351 + | hypothetical protein TERM 679 495608 - 495619 + T 76 -7.2 -4.2354 | AGGATCTATTTCACT CCCC TTTC GGGG TTCTTTTCACCTTTC TERM 680 497714 - 497697 - T 86 -8.5 -4.57073 | opp_overlap 497697 497700 TAGGTCTTTTAAAAA CAAGAAG ATGC CTTCTTG TCTACTATCCAGTCT TERM 681 497697 - 497714 + T 72 -8.5 -2.86177 | opp_overlap 497697, overlap 497700 TAGGTCTTTTAAAAA CAAGAAG ATGC CTTCTTG TCTACTATCCAGTCT yidC 499921 - 498380 - | 60 kDa inner membrane protein rnpA 500326 - 499940 - | ribonuclease P TERM 682 500410 - 500425 + r 81 -6.1 -5.00388 | opp_overlap 500410 AATTTATCAAAAAAA CACCG AAAAAG CGGTG TTTATTTTTGGTTTG TERM 683 500425 - 500410 - R 95 -6.1 -5.54894 | opp_overlap 500410 AATTTATCAAAAAAA CACCG AAAAAG CGGTG TTTATTTTTGGTTTG rpmH 500604 - 500470 - | 50S ribosomal protein L34 TERM 684 500767 - 500754 - R 70 -3.9 -5.3167 | opp_overlap 500754 TAAAAAGAAAGAAAA CATTT GGAT AAATG ATTTTTAATAAGCTC proS 502196 - 500772 - | prolyl-tRNA synthetase rpmG 504261 - 504112 - | 50S ribosomal protein L33 TERM 685 504200 - 504214 + g 78 -5.8 -4.89567 | GTCTTTTTTTTATTT TTATCA GTA TGATAA TTTTCTCTTTTGCAC AYWB_477 505312 - 504347 - | hypothetical protein AYWB_478 505623 - 505405 - | hypothetical protein TERM 686 505659 - 505705 + r 75 -9.3 -3.03159 | gap 1, opp_overlap 505659 505674, overlap 505674 TCACTTTATCAAAAA TTGT-AAATAAAAAAACAAACT AACT AGTTTGTTTTTTTATTTTAAAA TATTAAAAAAATTAA TERM 687 505704 - 505659 - R 100 -10.9 -4.7373 | opp_overlap 505659 505674, overlap 505674 TCACTTTATCAAAAA TTGTAAATAAAAAAACAAACT AACT AGTTTGTTTTTTTATTTTAAA ATATTAAAAAAATTA TERM 688 505674 - 505689 + r 100 -6.2 -6.09196 | opp_overlap 505659 505674, overlap 505659 TTGTAAATAAAAAAA CAAACT AACT AGTTTG TTTTTTTATTTTAAA TERM 689 505689 - 505674 - R 100 -6.2 -5.95539 | opp_overlap 505674 505659, overlap 505659 TTGTAAATAAAAAAA CAAACT AACT AGTTTG TTTTTTTATTTTAAA himA 506015 - 505695 - | DNA-binding protein HU TERM 690 505873 - 505883 + g 76 -4 -5.55695 | AAGGTGCCAAAACCT GTTA AAG TAAC TTTTTTATATTCTTC gpsA 507182 - 506166 - | glycerol-3-phosphate dehydrogenase [NAD(P)+] TERM 691 506446 - 506474 + g 78 -8.9 -3.14931 | overlap 506451 AAATCACCTAATCCT GGAAGTCCCAAAA CAG TTTGGGGGTTTCC TTGATAAAAAGTAAC TERM 692 507269 - 507251 - R 81 -7.5 -4.56187 | opp_overlap 507250 GATAATTAAAAATAA GGTTGAA TTTTC TTCAACC ACTTATAATTAAATC engA 508799 - 507360 - | GTP-binding protein EngA TERM 693 508144 - 508161 + g 80 -5.7 -5.18715 | opp_overlap 508142 508144 GGGCGTCCCACAACA CAAAATT TAAT AATTTTG TTTTCTTCTTTTTCT cmk 509471 - 508800 - | cytidylate kinase rsuA 510250 - 509513 - | 16S rRNA pseudouridylate synthase truB 511212 - 510361 - | tRNA pseudouridine synthase B TERM 694 510873 - 510886 + g 76 -3.9 -5.52384 | CTGAAAACATAGGAG GTATT TGCC AATAC TTTTTTTGATGAAAA TERM 695 511059 - 511046 - G 76 -3.8 -5.4833 | opp_overlap 511046 TTATCGAACAAAAAA GCCA GTTTAG TGGC TTTACCCACACAAAC trxA 511566 - 511246 - | thioredoxin TERM 696 511701 - 511711 + r 78 -4 -5.77853 | AAAAAATGATTTTTT TATG CAT CATA TTTTTTTTGGAACTT AYWB_486 512216 - 512034 - | hypothetical protein AYWB_487 512635 - 512405 - | hypothetical protein TERM 697 512548 - 512538 - G 76 -6.8 -4.53636 | opp_overlap 512539 ACTACATAATTAAAA CGTC CTG GACG AAGCAAGGCATAGTC AYWB_488 513050 - 512706 - | hypothetical protein TERM 698 512842 - 512824 - G 73 -5.2 -4.71401 | AATAAAAGCATAAAA GGACGCAT CTG ATTCGCCC GCCAGTACTTTGCAA TERM 699 512850 - 512863 + g 70 -3.1 -5.28683 | ATTCGCCCGCCAGTA CTTTG CAAG CAAGG TTTTTTCCTGTTCCT metG 514674 - 513112 - | methionyl-tRNA synthetase TERM 700 514468 - 514490 + g 84 -5.6 -5.30686 | TTGTGGATTTTTACC TTGTTGCAAA GAT TTAGCAGCAA TTTTTTGTCCGTGTT tpm 515617 - 514760 - | tetrapyrrole (Corrin/Porphyrin) methylase holB 516688 - 515702 - | DNA polymerase III, delta prime subunit TERM 701 515981 - 515967 - G 84 -5.8 -5.25803 | AACGCTGATAAAAAA TCATTT AAA AAATGA GGAAAAGAAGTAAGT TERM 702 516349 - 516333 - G 70 -2.3 -5.42259 | overlap 516335 GGATTTTCAAAAAAA TGCAATA AAC TATTGGA AGTTTGGGTAGTTAT tmk 517308 - 516685 - | thymidylate kinase truA 518087 - 517356 - | tRNA pseudouridine synthase A TERM 703 517396 - 517409 + g 76 -3.8 -5.52347 | opp_overlap 517384 AAGGCTTTGGCAGGA GCCA AAAGGG TGGC TTTTTTAGTTTTGTT TERM 704 518202 - 518177 - R 70 -4.1 -5.27779 | gap 1 GTTAATATTAAAAAA CCTCCTTAATCC TTA AGAT-AAGAAGG TTTTGATAATTGAAG rplQ 518614 - 518258 - | 50S ribosomal protein L17 rpoA 519650 - 518658 - | DNA-directed RNA polymerase subunit alpha TERM 705 519685 - 519695 + r 71 -6.8 -4.11216 | GAACAAGATTATTAT CCTC TAG GAGG TTTTGGCGGTCGACA rpsK 520067 - 519681 - | 30S ribosomal protein S11 rpsM 520475 - 520095 - | 30S ribosomal protein S13 rpmJ 520604 - 520488 - | 50S ribosomal protein L36 infA 520853 - 520617 - | protein translation initiation factor 1 map 521676 - 520933 - | methionine aminopeptidase TERM 706 521395 - 521415 + g 80 -9.1 -3.60431 | opp_overlap 521393 521398, overlap 521398 GTTAATTCCTAAATC TAAGGTGAT GAT ATCACCTTG TTTAAGGATGGTTTT TERM 707 521412 - 521398 - G 74 -8.6 -3.28269 | opp_overlap 521395 521398, overlap 521393 AATTCCTAAATCTAA GGTGAT GAT ATCACC TTGTTTAAGGATGGT TERM 708 521398 - 521412 + g 80 -8.6 -3.9281 | opp_overlap 521398 521393, overlap 521395 AATTCCTAAATCTAA GGTGAT GAT ATCACC TTGTTTAAGGATGGT adk 522326 - 521673 - | adenylate kinase secY 523586 - 522345 - | preprotein translocase subunit SecY rplO 524026 - 523589 - | 50S ribosomal protein L15 rpmD 524223 - 524026 - | 50S ribosomal protein L30 rpsE 524777 - 524220 - | 30S ribosomal protein S5 TERM 709 524413 - 524432 + gr 75 -7.2 -4.08064 | gap 1, opp_overlap 524411 524412 CCTCCAGCAACAATT CCAG-TTCC TTT GGAAGCTGG TTTTAAAAAAAACTT TERM 710 524468 - 524445 - GR 100 -6 -5.75342 | opp_overlap 524446, overlap 524446 TGGTTTTAAAAAAAA CTTAGACGCT CCAA AGCGTCCAAT AGTGTCATGAGGAAT TERM 711 524467 - 524446 - GR 87 -9.5 -4.04482 | opp_overlap 524446, overlap 524445 GGTTTTAAAAAAAAC TTAGACGCT CCAA AGCGTCCAA TAGTGTCATGAGGAA TERM 712 524524 - 524537 + gr 77 -5.3 -5.18357 | ACTAATTGTTTTTTG GCTTT TTCT AAAGC TTTTTTAATAGCTTC rplR 525103 - 524750 - | 50S ribosomal protein L18 TERM 713 524846 - 524860 + gr 83 -6.4 -5.03314 | AACAACGTTTTTAAT GCCTTG GGA TAAGGC TTTTTTAGCGATAAG rplF 525667 - 525113 - | 50S ribosomal protein L6 rpsH 526106 - 525714 - | 30S ribosomal protein S8 rpsN 526397 - 526128 - | 30S ribosomal protein S14 rplE 526957 - 526412 - | 50S ribosomal protein L5 rplX 527320 - 526973 - | 50S ribosomal protein L24P rplN 527696 - 527334 - | 50S ribosomal protein L14 rpsQ 527972 - 527709 - | 30S ribosomal protein S17 rpmC 528295 - 527972 - | 50S ribosomal protein L29 rplP 528714 - 528292 - | 50S ribosomal protein L16 rpsC 529450 - 528692 - | 30S ribosomal protein S3 TERM 714 529274 - 529302 + g 70 -2.3 -5.40474 | overlap 529283 ATTTTTTTCTTTTAG GCGTTCGATGTCA ATT TGACTTATAGCGC TTTTTTTAGCAAAAT TERM 715 529414 - 529437 + g 89 -7.6 -5.01732 | AAGTTCTAATAATGC CTAATCTTAA TCCG TTAGGATTAG TTTTTTGACCCACTT rplV 529823 - 529434 - | 50S ribosomal protein L22 rpsS 530125 - 529844 - | 30S ribosomal protein S19 TERM 716 530020 - 530038 + g 91 -3.9 -6.04324 | gap 1 TAATTGTAGAACTGC GTGA-CCA AGTT TGGATCAC TTTTTTGTTTTTTAA rplB 530968 - 530138 - | 50S ribosomal protein L2 TERM 717 530166 - 530176 + g 77 -5.4 -5.0538 | opp_overlap 530166 CGCCTAATAATTAAA GCAT TAG ATGC TTTTTTGCGGTCACG rplW 531316 - 531026 - | 50S ribosomal protein L23 TERM 718 531063 - 531079 + g 72 -3.7 -5.24129 | ATTTTTTGTCCCGGA GCTAATT TAC AAATAGC TTTTTTATAACCAGA TERM 719 531179 - 531190 + g 78 -4.4 -5.42514 | opp_overlap 531179 TTTAACTTGGAAAAT GCTT TCTA AAGC TTTTTTAATTTCTAC rplD 531939 - 531316 - | 50S ribosomal protein L4 TERM 720 531766 - 531793 + g 74 -9.2 -2.94912 | TTTTTTACCTCCGCC AGCTACCAAAGC GCGA GTTTTGGTAGCG TGTGTGCCTTGACGC rplC 532591 - 531926 - | 50S ribosomal protein L3P AYWB_523 532728 - 532573 - | hypothetical protein rpsJ 533089 - 532772 - | 30S ribosomal protein S10 TERM 721 533138 - 533124 - R 70 -7.2 -3.65832 | opp_overlap 533124 533123 533122, overlap 533122 533136 AAATTTTTGAAAATA TTGTCT ATT AGACAA ATATTTTGCTTAAAT TERM 722 534146 - 534130 - R 72 -2.4 -5.7946 | opp_overlap 534130 534139 534144, overlap 534134 534139 TGTCTAAGAAAAAAA TTATTT AAACA AAATAA TTTGTCTAATAATGA rpmF 534372 - 534166 - | 50S ribosomal protein L32 TERM 723 536143 - 536103 - H 81 -8 -4.48869 | gap 1, opp_overlap 536108 536115, overlap 536115 TAAAAATAATATAAA TAATAA-AAAAAACTATCC TTCA GGATAGTTTTTTGTTTTTA AGATCTAAATAATGA TERM 724 536108 - 536137 + H 88 -9.5 -4.64766 | opp_overlap 536103 536115, overlap 536115 ATAATATAAATAATA AAAAAAACTATCC TTCA GGATAGTTTTTTG TTTTTAAGATCTAAA TERM 725 536130 - 536115 - H 100 -7.6 -6.25741 | opp_overlap 536108 536115, overlap 536103 AAATAATAAAAAAAA CTATCC TTCA GGATAG TTTTTTGTTTTTAAG TERM 726 536115 - 536130 + H 100 -7.6 -5.93252 | opp_overlap 536115 536103, overlap 536108 AAATAATAAAAAAAA CTATCC TTCA GGATAG TTTTTTGTTTTTAAG TERM 727 537809 - 537795 - g 75 -3.6 -5.44721 | ACTACTTTAAAAAAA GAAATT AAC AACTTC CAAACCCAATTAACA TERM 728 538708 - 538697 - g 73 -3 -5.55664 | opp_overlap 538697 TGATTATCAAAAAAA CATT TATC AATG TTTAAATAATTTACT TERM 729 538939 - 538927 - g 74 -2.7 -5.67283 | AATCCAAAGAAAAAA GTTTA ACC CAAAC AACTAATTTAATGAA TERM 730 539078 - 539067 - g 74 -2.2 -5.58209 | TCAAACCTAAAAAAA GAAG CCCT CCTC AATTTTGAAAAAAAA TERM 731 539284 - 539268 - g 91 -2.4 -6.31682 | AAAACCAAAAAAAAA TTAATT ACTAA AATTAA ACTAACTAATTTCAA AYWB_526 536352 - 539438 + | hypothetical protein dppF 539641 - 540657 + | dipeptide transport ATP-binding protein DppF TERM 732 541047 - 541032 - g 86 -6.2 -5.24531 | opp_overlap 541032 541031 ATGCTTCATAAAAAA CTTGAT TACG ATCAAG CTTATAAAAAAACTC dppD 540669 - 541472 + | dipeptide transport ATP-binding protein DppD TERM 733 541870 - 541857 - g 71 -2.5 -5.43514 | opp_overlap 541857 AAAATAATGAAAAAA TAATT ACTA AATTA GTTGATAAGTGTGAA dppA 541595 - 543136 + | ABC-type dipeptide-binding protein, solute binding protein dppB 543186 - 544133 + | ABC-type dipeptide transport system, permease protein DppB dppC 544149 - 545018 + | ABC-type dipeptide transport system, permease protein DppC TERM 734 545659 - 545649 - g 74 -2.6 -5.63103 | CTTTAATGAAAAAAA TTTT GCA AAAA CAAGAACAAGAAAAA AYWB_532 545087 - 546583 + | Zn-dependent carboxypeptidase TERM 735 546608 - 546626 + T 100 -7.5 -6.28401 | opp_overlap 546608 ATAAAAAAAAAAAAA GACTCTT CTTGA AAGAGTC TTTTTTTGTTTTTTA TERM 736 546626 - 546608 - T 100 -8.2 -7.00209 | opp_overlap 546608 ATAAAAAAAAAAAAA GACTCTTC TTG AAAGAGTC TTTTTTTGTTTTTTA mgtA 549503 - 546645 - | cation transport ATPase TERM 737 548636 - 548668 + g 70 -6.6 -4.02119 | gap 1, opp_overlap 548636 548645, overlap 548634 AAATAATTATACCAA TTGTCAAAGTTAACT TTTT AGTTAA-TTTGGCAA TATTTTGTTCTAATG TERM 738 549567 - 549546 - R 86 -5.2 -5.95449 | opp_overlap 549546 AAATAAAATAAAAAA CTAAACCG TTTTAG CAGTTTAG TTTCGTTTCTTTTTT AYWB_534 550374 - 549556 - | hypothetical protein ileS 553093 - 550382 - | isoleucyl-tRNA synthetase TERM 739 550671 - 550682 + g 73 -3 -5.54885 | opp_overlap 550671, overlap 550662 CTTGCTTTTTCCAAA TGTT GTAA AACA TTTTTTCTTAATATT TERM 740 552291 - 552277 - G 70 -2.9 -5.27335 | overlap 552271 GGTTCCAAACAAAAA CTTTT TGAAG AAAAG GAATGTTTTTAGTTC AYWB_536 554273 - 553182 - | translation-associated GTPase TERM 741 553267 - 553279 + g 70 -4.9 -4.63479 | TTACCTTTTTCTTTA CTTTT TTG AAAAG TTTTGGTTTCTAATA TERM 742 553639 - 553625 - G 71 -4.2 -5.00616 | overlap 553627 CTTGTTGGTAAAAAA CGTTGG AAT CCAAAG ATAATAAATCATGTT AYWB_537 555362 - 554442 - | GTPase TERM 743 555717 - 555756 + r 100 -6.6 -5.54885 | opp_overlap 555721 555726, overlap 555721 555726 AAAATTGTTACATAA AAAAGAAAAGACTCCTTA TTAT TAAGGAGTCTTTTGTTAA TTTTTTATTAATATT TERM 744 555752 - 555721 - R 100 -11.8 -5.36441 | opp_overlap 555717 555721 555726, overlap 555726 TTGTTACATAAAAAA GAAAAGACTCCTTA TTAT TAAGGAGTCTTTTG TTAATTTTTTATTAA TERM 745 555721 - 555752 + r 95 -11.8 -4.04157 | opp_overlap 555721 555726, overlap 555717 555726 TTGTTACATAAAAAA GAAAAGACTCCTTA TTAT TAAGGAGTCTTTTG TTAATTTTTTATTAA TERM 746 555747 - 555726 - R 100 -11.7 -5.51612 | opp_overlap 555721 555717 555726, overlap 555721 ACATAAAAAAGAAAA GACTCCTTA TTAT TAAGGAGTC TTTTGTTAATTTTTT TERM 747 555726 - 555747 + r 100 -11.7 -4.95211 | opp_overlap 555726 555721, overlap 555721 555717 ACATAAAAAAGAAAA GACTCCTTA TTAT TAAGGAGTC TTTTGTTAATTTTTT glyA 557143 - 555854 - | serine hydroxymethyltransferase TERM 748 556066 - 556079 + g 71 -3.9 -5.13354 | AAGGAATAGTATTTT TATTG ACAA CAATA TTTATTTTTTCTAAC cbiQ 558240 - 557194 - | ABC-type cobalt transport protein CbiQ cbiO 559110 - 558250 - | cobalt transport ATP-binding protein cbiO cbiO 559955 - 559086 - | cobalt transport ATP-binding protein cbiO TERM 749 559424 - 559414 - G 77 -5.4 -5.1101 | TGAGGATCTAAAAAA GAAG TTG CTTC ATCAAAGATAATAAT oepF 561789 - 560086 - | oligoendopeptidase F TERM 750 560400 - 560384 - G 73 -8.1 -3.35798 | overlap 560375 560381 CGAAACCAAAAAGTA CCTTTTT CTA AAAAAGG GTCGCCTTCATAAGT TERM 751 561552 - 561570 + g 76 -4.6 -5.31855 | CGGTTATCAAAGGAG CATTTTGG TCA CAAAAATG TTTTTCTTCTTGATA AYWB_543 562546 - 561887 - | hypothetical protein TERM 752 562048 - 562062 + g 75 -3.6 -5.40474 | TTTTCATTGGAGTTT TAACTT GCC AAGTTG TTTTTTTAAAAAGAT TERM 753 562266 - 562248 - G 83 -10.4 -2.79518 | opp_overlap 562245, overlap 562247 GCAAAAGGTTCAAAT CCAAAACT TTG AGTTTTGG GCATTAAATAAAAAC AYWB_544 563319 - 562639 - | hypothetical protein TERM 754 563554 - 563538 - R 78 -5.9 -4.84219 | overlap 563542 563543 AAAGGAGAAAATAAA GAAAGTA GAC CACTTTC AAAAAATGGTCTAAG TERM 755 563568 - 563542 - R 84 -7.4 -4.91046 | overlap 563538 563543 GAGAAAATAAAGAAA GTAGACCACTTT CAA AAAATGGTCTAA GGAGTTTTATTTATA TERM 756 563567 - 563543 - R 87 -10.9 -3.52187 | overlap 563538 563542 AGAAAATAAAGAAAG TAGACCACTTT CAA AAAATGGTCTA AGGAGTTTTATTTAT gapA 564614 - 563607 - | glyceraldehyde-3-phosphate dehydrogenase TERM 757 563812 - 563831 + g 84 -10.8 -2.60798 | overlap 563811 GCTAAAGTTTCATTA GCAGCTTT TTTA AAAGCTGC ATTGATGGTTTCTGG pgk 565948 - 564752 - | phosphoglycerate kinase TERM 758 566038 - 566048 + r 82 -2.6 -6.37666 | TTTGATTGTGTCATT TTTA TTA TAAA TTTTTTTTATTTTAT fba 567525 - 566659 - | fructose bisphosphate aldolase AYWB_548 568585 - 567788 - | HAD family hydrolase tpiA 569546 - 568722 - | triosephophate isomerase cdsA 570718 - 569807 - | phosphatidate cytidylyltransferase frr 571333 - 570779 - | ribosome recycling factor pyrH 572061 - 571336 - | uridylate kinase TERM 759 571930 - 571941 + g 76 -4.4 -5.20222 | AATGATAGCAATTTT GACT CCTA AGTC TTTTATTTCTTTGAT tsf 572976 - 572152 - | elongation factor Ts rpsB 573888 - 573079 - | 30S ribosomal protein S2 TERM 760 573411 - 573421 + g 75 -5.4 -4.90217 | opp_overlap 573411 CAAAAATAAAAATAG CTTG AGG CAAG TTTTTCATGTCTTTG TERM 761 573489 - 573504 + g 71 -4 -5.02074 | GCTTTAATTTCACTA CTTCTT TTTT AGGAAG TTTTTTCCAAAGTCC TERM 762 574085 - 574095 + r 72 -2.6 -5.75342 | GATTAAATAAAAGCT TTTT TTG AAAA TTTTTTTTGGGAAGA TERM 763 574288 - 574276 - R 74 -3.5 -5.70522 | AATAAGAACAAAAAA TAAAA TGT TTTTA AAATGATGAAAATAA TERM 764 574367 - 574341 - R 73 -6.7 -4.24948 | opp_overlap 574342 TTATCATATTTAAAA CCATTTAACAA TGTTT TTGTTGAATGG AGTGCAATTTTGTTA dut 574877 - 574380 - | deoxyuridine 5'-triphosphate nucleotidohydrolase ung 575630 - 574992 - | uracil-DNA glycosylase TERM 765 575086 - 575074 - G 75 -3.3 -5.50499 | TTAGATCCAAAAAAA CCTCT ATG AGCGG AAAAAGGGGAAGGAT AYWB_557 576443 - 575715 - | hypothetical protein TERM 766 576197 - 576179 - G 73 -8.2 -3.42503 | CGCCAACAGGCATAA GTTTGGAA GCA TCCCAAAC ACCTATAATAAAAAC TERM 767 576368 - 576395 + g 70 -5.8 -4.43669 | opp_overlap 576368 576366 CTAAAATAATAATCA TACTTTTTTTAA AAAT TAAAAAAAAGTA TTTCGTTTTTTGACT AYWB_558 576722 - 577429 + | hypothetical protein TERM 768 577508 - 577532 + T 100 -15.9 -3.81689 | opp_overlap 577508, overlap 577498 TAACAAAAAGAAAAA GCATGCAAAAG GAG CTTTTGCATGC TTTCATCCTAATATT TERM 769 577532 - 577508 - T 100 -15.9 -5.74684 | opp_overlap 577498 577508 TAACAAAAAGAAAAA GCATGCAAAAG GAG CTTTTGCATGC TTTCATCCTAATATT AYWB_559 578241 - 577552 - | hypothetical protein ackA 580772 - 579540 - | acetate kinase hlyC 581717 - 580878 - | hemolysin III TERM 770 581914 - 581900 - H 74 -8.6 -3.21726 | overlap 581895 GGTTATAATATTTAA GGAAAC TGA GTTTCC ATAGAAAAGGAATAT TERM 771 582063 - 582039 - g 74 -2.1 -5.65513 | overlap 582043 582045 TATTAATCAAAAAAA TAAATCCGCCC CTA AGGCAAAATTA AGCCAACCCCTTCCT TERM 772 582059 - 582043 - g 70 -2.9 -5.25976 | overlap 582039 582045 AATCAAAAAAATAAA TCCGCCC CTA AGGCAAA ATTAAGCCAACCCCT AYWB_562 581935 - 582870 + | hypothetical protein AYWB_563 583316 - 583510 + | hypothetical protein AYWB_564 583886 - 584098 + | hypothetical protein TERM 773 584211 - 584198 - f 75 -2.5 -5.96219 | overlap 584205 TATTTATAAAAAAAA TATAA CATA TTATA AATAGCTTACAATTT TERM 774 584318 - 584335 + F 91 -5.6 -5.7946 | opp_overlap 584318 CAAACAAACCCCAAA GAGACT TTTTAC AGTCTC TTTTTTTATTAAACC priA 584431 - 586872 + | primosomal protein N' TERM 775 587268 - 587282 + G 70 -5.8 -4.28361 | TTCTTATGAATCCGA TAATCA TAT TGATTA TTTTAATCGCATTAA TERM 776 587291 - 587301 + G 82 -5.4 -5.43866 | overlap 587284 TTGATTATTTTAATC GCAT TAA ATGC TTTTTTTGCAGCTTG tlyC 587258 - 588529 + | hymolysin-related protein TERM 777 588538 - 588561 + T 84 -5.4 -5.33866 | opp_overlap 588540, overlap 588540 AAAATAAAATAAAAA AAGCAAATAT TTTC ATATTTGCTC TTTTTTATACCTTTA TERM 778 588540 - 588559 + T 79 -8 -4.28383 | opp_overlap 588540, overlap 588538 AATAAAATAAAAAAA GCAAATAT TTTC ATATTTGC TCTTTTTTATACCTT TERM 779 588559 - 588540 - T 100 -8 -6.17669 | opp_overlap 588538 588540 AATAAAATAAAAAAA GCAAATAT TTTC ATATTTGC TCTTTTTTATACCTT TERM 780 588619 - 588598 - T 70 -3.9 -5.26875 | TGTTCAATTAAAAAA TCATTTATT TTCA AATAAATAA TAATGAGTAGTAAAA pth 589202 - 588636 - | peptidyl-tRNA hydrolase TERM 781 589315 - 589325 + r 75 -2.6 -5.93252 | TTTGAATTATTTTAC TAAT TAC ATTA TTTTTTCTTTTTGAA AYWB_568 589485 - 589318 - | hypothetical protein TERM 782 589436 - 589455 + g 82 -9.4 -3.35384 | opp_overlap 589436, overlap 589434 GCAATAAAGAAAAAA GATGCTTT CATT AAAGCATC TCTTATATAAATTAT TERM 783 589455 - 589436 - G 100 -9.4 -5.80003 | opp_overlap 589436 589434 GCAATAAAGAAAAAA GATGCTTT CATT AAAGCATC TCTTATATAAATTAT rbfA 589836 - 589495 - | ribosome-binding factor A infB 591711 - 589840 - | translation initiation factor IF-2 TERM 784 590508 - 590522 + g 86 -7.2 -5.02716 | GAGAAGGGGGTTTAG CTAAAG TTT CTTTAG TTTTGGTTTTTTTTT AYWB_571 592117 - 591860 - | hypothetical protein nusA 593196 - 592123 - | transcription elongation factor NusA AYWB_573 595297 - 593438 - | hypothetical protein TERM 785 594809 - 594826 + g 70 -5.7 -4.4281 | opp_overlap 594808 AGGGTTTGTATAATG GAAAAAA GGCA TTTTTTC TTTGTTATCATTTAC TERM 786 594943 - 594933 - G 71 -4 -5.09895 | TATCCATCTAAAAAA CAAT AAA ATTG ATATCCTTGTTTATT smpB 595870 - 595412 - | SsrA-binding protein TERM 787 595503 - 595521 + g 77 -7.5 -4.14725 | TTATCATGTTTTTTC TTGCCTT TAGCT AAGGCAA TTTCTAATTTAACTA TERM 788 596079 - 596061 - R 78 -4 -5.79588 | opp_overlap 596064, overlap 596053 596052 TCAAAACTAAAAAAA TCATTTTT TCA AAAAATAA ATTTTATTTGCAAAA ppa 596663 - 596109 - | inorganic pyrophosphatase spoU 597436 - 596732 - | 23S rRNA methyltransferase thiI 598819 - 597515 - | thiamine biosynthesis protein ThiI TERM 789 598896 - 598854 - R 71 -6 -4.16284 | opp_overlap 598854 ATATTTTTGAATAAA TTATATTTAAATATCTTTAT ACA ATTAAAATATTAAAATATAA TAACTTTTTACAGAT TERM 790 599109 - 599121 + r 82 -4.7 -5.89659 | TGTGATGTAATCATT GGTGC ATT GCTCC TTTTTATTTTTTTAT TERM 791 600030 - 600053 + r 82 -9.8 -3.70902 | opp_overlap 600009 600030, overlap 600009 TATAAACAAAAAAAA GATTAACTTT TACA AAAGTTAATC TTTCCATATAAAAAA TERM 792 600053 - 600030 - R 100 -9.8 -6.28967 | opp_overlap 600009 600030, overlap 600009 TATAAACAAAAAAAA GATTAACTTT TACA AAAGTTAATC TTTCCATATAAAAAA udk 601729 - 600089 - | uridine kinase cysS 603235 - 601919 - | cysteinyl-tRNA synthetase TERM 793 602282 - 602262 - G 74 -4.2 -5.27938 | opp_overlap 602262, overlap 602256 602249 602248 602244 ACTTTTAAATAAAAA TTATTTTT AGTTA AAAAATAA GTTATTTTTTTGTAT TERM 794 602425 - 602442 + g 71 -2.7 -5.48054 | opp_overlap 602425 TACACCAAATAATAT TGCCTAA AGAT TTAGACA TTTTTTGATTTTGAT TERM 795 602983 - 602993 + g 70 -5.4 -4.57341 | overlap 602978 TGGCTAAATCTTTTT CCAA AAC TTGG TTTTTAAGCGAAGTT glnS 604686 - 603337 - | glutamyl-tRNA synthetase TERM 796 604779 - 604759 - R 79 -2.6 -6.11019 | opp_overlap 604760, overlap 604749 604760 AAAAATTAAAAAAAA GGAACTTT TTTAC AAAGTTCT TTTTTGGATTAACGT TERM 797 604760 - 604778 + r 84 -6.1 -5.15969 | opp_overlap 604749 604759 604760 AAAATTAAAAAAAAG GAACTTT TTTAC AAAGTTC TTTTTTGGATTAACG TERM 798 604778 - 604760 - R 71 -6.1 -4.21121 | opp_overlap 604760, overlap 604749 604759 AAAATTAAAAAAAAG GAACTTT TTTAC AAAGTTC TTTTTTGGATTAACG TERM 799 604810 - 604820 + r 93 -6.8 -5.41143 | TTGGAAAATTGTGGT GCTC GAC GAGC TTTTTTTAAACCGTA rpsI 605180 - 604788 - | 30S ribosomal protein S9 rplM 605643 - 605185 - | 50S ribosomal protein L13 AYWB_583 606102 - 605875 - | hypothetical protein thiJ 606687 - 606145 - | 4-methyl-5(B-hydroxyethyl)-thiazole monophosphate biosynthesis enzyme TERM 800 606833 - 606813 - R 75 -2.6 -6.01725 | AATAAAAATAAAAAA TACCACAA AAAAA CTGTGATA TTTTAATTATTAATT rpsO 607067 - 606843 - | 30S ribosomal protein S15 AYWB_586 607595 - 607134 - | hypothetical protein AYWB_587 608256 - 607555 - | methionine transport ATP-binding protein nlpA 609315 - 608269 - | ABC-type methionine transport system, periplasmic component TERM 801 608416 - 608435 + g 73 -5.2 -4.67641 | AATAGCTTCTTCTTC TTTTAAAA TATC TTTTAAAA TTTTAATTTTCCAGT metN 610093 - 609398 - | methionine transport ATP-binding protein TERM 802 609760 - 609774 + g 78 -5.8 -4.85782 | AATCTAGCATTTTGT TTACTT TAG AAGTAA TTTGTTTTTCAGGAG rluA 611111 - 610191 - | ribosomal large subunit pseudouridine synthase D ftsH 613371 - 611341 - | cell division protein ftsH-like protein TERM 803 613001 - 612991 - G 80 -4 -5.69023 | overlap 612994 AAAACAGTAAAAAAA TAAC ATT GTTA AACATTGTCTAAATA TERM 804 613433 - 613411 - R 80 -9.4 -3.53224 | opp_overlap 613411 TATCTTTGGGTTAAA CATTAAAATA AAA TATTTTAATG TTTTGAGTTTAAATT TERM 805 613411 - 613433 + r 87 -9.4 -4.37198 | opp_overlap 613411 TATCTTTGGGTTAAA CATTAAAATA AAA TATTTTAATG TTTTGAGTTTAAATT mesJ 614800 - 613490 - | cell cycle protein MesJ aspS 616540 - 614810 - | aspartyl-tRNA synthetase hisS 617813 - 616530 - | histidyl-tRNA synthetase TERM 806 616742 - 616731 - G 70 -3 -5.36364 | GGAAAAAGATAAAAA CTTA TAAT TAAG ATCAGCGGAAAAACC AYWB_595 617996 - 617832 - | hypothetical protein spoT 620330 - 618093 - | GTP pyrophosphokinase TERM 807 619910 - 619933 + g 74 -2.4 -5.57396 | overlap 619926 CAATAACAACTCTAA TGTCTTTCGC CATC GCTAAAAACA TTTTTTGTTGATTAT trmU 621532 - 620396 - | tRNA (5-methylaminomethyl-2-thioruidylate) methyltransferase qns 623542 - 621635 - | glutamine-dependent NAD(+) synthetase TERM 808 621833 - 621847 + g 91 -7.2 -5.21709 | opp_overlap 621821, overlap 621821 TAACCAAGCAATTTT GGTTTT GGT AAAACC TTTTTTGATGTGGCA TERM 809 623002 - 622984 - G 73 -5.4 -4.72486 | CAGAAAGGTTAAAAA TTAAATGA GCC CCATTTAA GGAAAGTAGATCGCC TERM 810 623420 - 623410 - G 70 -5.4 -4.47786 | AACTACTTAAACAAA GTTC AGG GAAC AAAACAAAACTGGCT TERM 811 623741 - 623757 + r 76 -5.3 -5.25656 | opp_overlap 623741 623739 AAAAAAATAAAACCA TTATATA TAT TATATAA TTTTTTAATAATTTT TERM 812 623918 - 623898 - R 100 -5.5 -6.5058 | opp_overlap 623898 623897 ATAAATAAAAAAAAA CTAGGTT AAAAAAA AACCTAG CTTTTTTTAAAAACA AYWB_599 624445 - 623951 - | immunodominant membrane protein precursor groEL 626213 - 624603 - | chaperonin GroEL TERM 813 624928 - 624941 + g 70 -5.3 -4.5774 | overlap 624917 ACTTCTTTATTATCA GATAC TAAA GTATC TTTTAATTCTTGATA groES 626608 - 626339 - | 10 kDa chaperonin GroES AYWB_602 627554 - 626832 - | hypothetical protein TERM 814 627759 - 627737 - H 91 -5 -6.20267 | opp_overlap 627737 627740 TTAAAAATAAAAAAA TAATGGATAT TTT ATATACATTA TTTACTATAATTATT TERM 815 628070 - 628058 - H 74 -3.5 -5.54264 | AAATAGGCAAAAAAA TAATT AGG AATTA AAATAATAAATAAAA rpmB 628409 - 628597 + | 50S ribosomal protein L28 rpmE 628768 - 629040 + | 50S ribosomal protein L31 TERM 816 629519 - 629535 + G 78 -5.9 -4.82901 | opp_overlap 629519 ATTGAAGTTATTATA TCAGGTT TAG AACTTGA TTTTTGTGGAAAACC tdk 629102 - 629803 + | thymidine kinase codA 629862 - 630347 + | cytosine deaminase TERM 817 630401 - 630420 + F 90 -7.9 -5.07652 | opp_overlap 630398 630401 630403 ATAACAACCCAATTA GACCATC ACAACC GATGGTC TTTTATTTTCAAAAA TERM 818 630420 - 630401 - f 72 -8.6 -2.8237 | opp_overlap 630401, overlap 630398 630403 ATAACAACCCAATTA GACCATCA CAAC CGATGGTC TTTTATTTTCAAAAA TERM 819 630546 - 630528 - f 71 -6.2 -4.15654 | overlap 630522 TAATAATAATAATAA TATTAAAT AAT ATTTAATA AAAAATAAATAATAA TERM 820 630768 - 630779 + G 72 -5.8 -4.48713 | opp_overlap 630767 630768 ATCTTAAAAACAAAC GGCT TCGA AGCC TTTATTGTTGGTGGC pcnB 630708 - 631931 + | poly(A) polymerase TERM 821 632781 - 632793 + G 71 -7.7 -3.55444 | opp_overlap 632781 632780 632777 AAGTGGAAAAAGAAG CCCAA TTA TTGGG TTTACAAGATAAAGA cbf 632003 - 633058 + | CMP-binding factor AYWB_609 633399 - 633238 - | fragment of IscU protein AYWB_610 633772 - 633608 - | hypothetical protein AYWB_611 634196 - 633789 - | hypothetical protein rve 635332 - 634811 - | integrase TERM 822 635031 - 635056 + g 71 -7.1 -3.70741 | overlap 635029 GCTTTTCTCGACATG CTGATTAAAAA ACCT TTTTTAATTAG TGTTTGTTGGACTTT AYWB_613 635777 - 635379 - | hypothetical protein TERM 823 635927 - 635938 + r 70 -7.2 -3.68662 | TTATGATTGTTATTA GCGC TTCA GCGC TTTAGGGTATTGTGT TERM 824 636269 - 636281 + r 79 -4.9 -5.40474 | TTAGATATATATTTA TACAT GGG ATGTA TTTTTTTAACCCGAT AYWB_614 636871 - 636305 - | hypothetical protein TERM 825 636945 - 636928 - R 100 -9.9 -6.02914 | opp_overlap 636937 TTGATATAAAAAAAA GACCTTC AATT GAAGGTC AAGTTTGAATATTGA AYWB_615 637908 - 637072 - | hypothetical protein dnaG 639232 - 638123 - | DNA primase dnaB 640969 - 639554 - | replicative DNA helicase TERM 826 640626 - 640658 + g 72 -6.5 -4.38092 | overlap 640624 640630 640632 AGTTTTTCTTGGGTA TAGGTATGTTTTAGA TTA TCTAAAACATGATTA TTATTTTGGTTATTA TERM 827 640630 - 640654 + g 78 -9.5 -3.14308 | overlap 640626 640624 640632 TTTCTTGGGTATAGG TATGTTTTAGA TTA TCTAAAACATG ATTATTATTTTGGTT TERM 828 640632 - 640652 + g 81 -9.9 -3.10636 | overlap 640630 640626 640624 TCTTGGGTATAGGTA TGTTTTAGA TTA TCTAAAACA TGATTATTATTTTGG AYWB_618 641736 - 640990 - | hypothetical protein TERM 829 641679 - 641692 + g 84 -3.9 -5.75538 | CGATTAATTGATTAC GAATT TCTA AATTC TTTTTATTTTTTAAA TERM 830 641826 - 641807 - R 100 -7.2 -5.95539 | CTTGAAACAAAAAAA GACTAACT TAAT AGTTAGCC TTAAAGAATTTTTAA phnL 643876 - 642362 - | ABC-type transport system, ATPase component AYWB_620 645191 - 644022 - | hypothetical protein TERM 831 644464 - 644474 + g 76 -4 -5.42164 | TCTTTAATAGATGAC CAAA GGT TTTG TTTTTCTTGTTTATC mntB 646692 - 645598 - | ABC-type Mn/Zn transport system, membrane protein TERM 832 646023 - 646013 - G 76 -4 -5.48163 | opp_overlap 646013 AAAGAAAGCAAAAAA CTAT TAC ATAG ATTCTTAGTAGCCAA mntB 647765 - 646692 - | ABC-type Mn/Zn transport system, membrane protein mntA 648550 - 647786 - | ABC-type Mn/Zn transport system, ATP-binding protein TERM 833 648307 - 648322 + g 78 -2.5 -5.87996 | CAACTGAATTTCTTT GTGGC ACGTAG GCTAC TTTTTTTCTTAATTG znuA 649714 - 648572 - | ABC-type Mn/Zn transport system, periplasmic Mn/Zn-binding protein AYWB_625 650893 - 651843 + | hypothetical protein TERM 834 651933 - 651914 - T 91 -10.8 -4.12405 | opp_overlap 651914 ATAAAGACAATGAAA GCCAAACT TTGT AGTTTGGC TTTTTTATTTATAAT TERM 835 651914 - 651933 + T 100 -10.8 -5.73978 | opp_overlap 651914 ATAAAGACAATGAAA GCCAAACT TTGT AGTTTGGC TTTTTTATTTATAAT TERM 836 653178 - 653194 + T 71 -8.1 -3.31183 | opp_overlap 653178 TGGGTAATAAAAAAA GATCTTA ATA TAAGATC TTGCATTTGACTTAT TERM 837 653194 - 653178 - T 100 -8.1 -5.7946 | opp_overlap 653178 TGGGTAATAAAAAAA GATCTTA ATA TAAGATC TTGCATTTGACTTAT obgE 654516 - 653257 - | GTPase ObgE TERM 838 653681 - 653696 + g 74 -4.8 -5.0666 | TCAGGTAAATCCATT TTATTG GTAA CAATAA TTTGTTTTTTAAGTA rpmA 654831 - 654553 - | 50S ribosomal protein L27 AYWB_628 655168 - 654833 - | hypothetical protein rplU 655482 - 655174 - | 50S ribosomal protein L21 TERM 839 655551 - 655572 + r 85 -3.1 -6.36459 | opp_overlap 655548, overlap 655548 655553 GATAATAATTAATTG TTTAAAAAC AATG GTTTTTATA TTTTTTTTTATTGGG TERM 840 655553 - 655570 + r 74 -5.7 -4.81831 | opp_overlap 655548, overlap 655548 655551 TAATAATTAATTGTT TAAAAAC AATG GTTTTTA TATTTTTTTTTATTG TERM 841 655634 - 655612 - R 82 -2.9 -6.28631 | CAAACCAAAAAAAAA TACAATAAT CATAC ATTATTATA ACATATCTTATTGAA AYWB_630 656633 - 655668 - | hypothetical protein AYWB_631 657117 - 656776 - | hypothetical protein TERM 842 657255 - 657220 - R 71 -3.5 -5.4505 | gap 1, opp_overlap 657221, overlap 657221 TTTGGCAATAAAAAA CGCCGAATCATTTTAT TTTTC ATAAAA-GATTCGACT CTATATTCTAAATTA TERM 843 657254 - 657221 - R 71 -7 -3.86307 | gap 1, opp_overlap 657221, overlap 657220 TTGGCAATAAAAAAC GCCGAATCATTTTAT TTTTC ATAAAA-GATTCGAC TCTATATTCTAAATT serS 658566 - 657292 - | seryl-tRNA synthetase TERM 844 657425 - 657436 + g 73 -3 -5.51353 | opp_overlap 657425, overlap 657414 657420 GAACCGTTTAGAATA TGAA CGTA TTCA TTTTTGTTGTTTTTA TERM 845 657751 - 657741 - G 70 -5.4 -4.57073 | opp_overlap 657741 657739 GATGTTGTCTAAAAA TACC TCG GGTA TCTTTGCCAGCTGAG rpsT 659240 - 658980 - | 30S ribosomal protein S20 TERM 846 659400 - 659420 + r 74 -7.1 -4.09117 | TAGGTGATAGCTCCG TAAAAAATA TGT TATTTTTTA TTATTTATAAATAAA TERM 847 660059 - 660038 - R 81 -5.9 -4.97312 | opp_overlap 660037 660038 AAAATCAAGGAAAAA CCAAACTGT AATT AAAGTTTGG GTTATTTTAATTAAA glnQ 660824 - 660096 - | ABC-type glutamine transport system, ATP-binding protein glnQ TERM 848 660614 - 660624 + g 74 -4 -5.21236 | ATAATTTTACTCCTT TATC TAA GATA TTTTTATTATCAATT AYWB_635 662622 - 660826 - | ABC-type amino acid transport system, permease and periplasmic component TERM 849 665312 - 665330 + G 70 -6.2 -4.25104 | opp_overlap 665312 AAACAAATGCATTAA TTAAAATA ATA TATTTTAA TTTTAATGGAGAACA TERM 850 665484 - 665464 - g 70 -8.5 -2.60395 | overlap 665463 665461 CAAACTAAAAATTAT TTCAAAATA GAA TATTTTGAA GTTGACGGTAAAACA AYWB_636 665002 - 665757 + | hypothetical protein TERM 851 665795 - 665770 - T 100 -10.6 -6.15717 | opp_overlap 665773 TAAATATAAAAAAAA TAACTCCCTA TTATTT TAGGGAGTTA TACAATAAATAAAAA TERM 852 665773 - 665792 + T 71 -7.9 -3.33492 | opp_overlap 665770 ATATAAAAAAAATAA CTCCCTA TTATTT TAGGGAG TTATACAATAAATAA TERM 853 666055 - 666068 + T 100 -8.1 -5.60993 | opp_overlap 666051 666055 TATTTACACAATTAA GTCCC TTTA GGGAC TTTTTTTATACCCAA TERM 854 666068 - 666055 - T 72 -8.1 -3.50332 | opp_overlap 666055, overlap 666051 TATTTACACAATTAA GTCCC TTTA GGGAC TTTTTTTATACCCAA TERM 855 666219 - 666234 + T 71 -3.4 -5.40072 | opp_overlap 666219, overlap 666208 AGTTTTTGTAATTTA TAAATA ATTT TATTTA TTTTTTTCCAACAAC TERM 856 666274 - 666254 - T 86 -8.3 -4.89477 | TTTCCAACAACAAAA GCCGTCCAA TAA TTAGACAGC AAAAATTAATTAAAA AYWB_637 666719 - 666519 - | hypothetical protein AYWB_638 667123 - 666695 - | hypothetical protein AYWB_639 667196 - 667038 - | hypothetical protein AYWB_640 668615 - 668893 + | hypothetical protein TERM 857 668887 - 668876 - f 79 -4.4 -5.67283 | opp_overlap 668876 AATTTAAACAAAAAA CCTA TTAG TAGG TTATAACAAAAAAAT AYWB_641 669210 - 669383 + | hypothetical protein TERM 858 669739 - 669754 + T 71 -3.4 -5.40072 | opp_overlap 669739, overlap 669728 AGTTTTTGTAATTTA TAAATA ATTT TATTTA TTTTTTTCCAACAAC TERM 859 669794 - 669774 - T 86 -8.3 -4.89477 | TTTCCAACAACAAAA GCCGTCCAA TAA TTAGACAGC AAAATTAATTAAAAA AYWB_642 670243 - 669938 - | hypothetical protein AYWB_643 670747 - 670547 - | hypothetical protein TERM 860 671281 - 671269 - R 79 -4.9 -5.40072 | GTCGGGTTAAAAAAA TACAT CCC ATGTA TAAATATATATCCAA TERM 861 671632 - 671607 - R 74 -3.4 -5.65678 | ATAAAAGATAAAAAA GATAACATTA ATTAGA TAATGTTTTC AAATGCCCCAAATGA TERM 862 671932 - 671942 + r 72 -2.6 -5.82316 | TTTTAATTTAAGTAT TTTT TTT AAAA TTTTTTTTAACTAAT TERM 863 672258 - 672244 - R 71 -5.8 -4.62069 | TTGTGATTTTAAAAA TTCTTT GAT AAAGAA CTGCAATTTGTCCAT AYWB_644 672384 - 672223 - | hypothetical protein TERM 864 672867 - 672825 - H 100 -12.4 -4.06864 | opp_overlap 672827 672830 672838, overlap 672827 672828 672830 672838 GTGATATAATAAGAA TAGCATAGACAAATTTATTT TTA AAATAAATTTGTCTATGGTT AAATTGAATTGCGAT TERM 865 672865 - 672827 - H 100 -15 -3.61971 | opp_overlap 672827 672830 672838, overlap 672825 672828 672830 672838 GATATAATAAGAATA GCATAGACAAATTTATTT TTA AAATAAATTTGTCTATGG TTAAATTGAATTGCG TERM 866 672827 - 672865 + H 100 -15 -3.20991 | opp_overlap 672827 672825 672828 672830 672838, overlap 672830 672838 GATATAATAAGAATA GCATAGACAAATTTATTT TTA AAATAAATTTGTCTATGG TTAAATTGAATTGCG TERM 867 672864 - 672828 - H 100 -18.5 -2.76098 | opp_overlap 672827 672830 672838, overlap 672827 672825 672830 672838 ATATAATAAGAATAG CATAGACAAATTTATTT TTA AAATAAATTTGTCTATG GTTAAATTGAATTGC TERM 868 672862 - 672830 - H 100 -15.3 -2.91032 | opp_overlap 672827 672830 672838, overlap 672828 672827 672825 672838 ATAATAAGAATAGCA TAGACAAATTTATTT TTA AAATAAATTTGTCTA TGGTTAAATTGAATT TERM 869 672830 - 672862 + H 100 -15.3 -2.79456 | opp_overlap 672830 672828 672827 672825 672838, overlap 672827 672838 ATAATAAGAATAGCA TAGACAAATTTATTT TTA AAATAAATTTGTCTA TGGTTAAATTGAATT AYWB_645 672951 - 673757 + | hypothetical protein TERM 870 673771 - 673755 - f 71 -3.1 -5.60993 | TCCTTTATAAAAAAA TAAAAAA TAA CTTTTTA AAATATTATTTAGTT TERM 871 673817 - 673868 + F 100 -20.9 -4.88711 | opp_overlap 673831, overlap 673831 673867 CTTCTTTTCTTTTTT TATAAACAAAAAAACTAATCTTT CTAAAA AAAGATTAGTTTTTTTGTTTATA TTTTTAATATCTTGT TERM 872 673854 - 673831 - f 100 -7.6 -6.02919 | opp_overlap 673817 673831 TTATAAACAAAAAAA CTAATCTTTC TAAA AAAAGATTAG TTTTTTTGTTTATAT TERM 873 673831 - 673854 + F 100 -6.9 -6.04953 | opp_overlap 673831, overlap 673817 TTATAAACAAAAAAA CTAATCTTT CTAAAA AAAGATTAG TTTTTTTGTTTATAT TERM 874 674338 - 674323 - f 71 -6.2 -4.24204 | TATTTAGATTCAAAA GTTATG TAGC CATAAC GCTCTGAAGCGCTAA TERM 875 674408 - 674383 - f 74 -3.4 -5.65678 | ATAAAAGATAAAAAA GATAACATTA ATTAGA TAATGTTTTC AAATGCCCCAAATGA TERM 876 674707 - 674717 + F 72 -2.6 -5.82316 | TTTTAATTTAAGTAT TTTT TTT AAAA TTTTTTTTAACTAAT TERM 877 675033 - 675019 - f 71 -5.8 -4.62069 | TTGTGATTTTAAAAA TTCTTT GAT AAAGAA CTGCAATTTGTCCAT pduL 675944 - 676531 + | propanediol utilisation protein PduL TERM 878 676665 - 676678 + F 72 -2.5 -5.7946 | opp_overlap 676665 ACTAAAAAACATAAC TAAAA ATTA TTTTA TTTTTTTATTGAACG TERM 879 676681 - 676738 + F 100 -16.9 -2.80579 | opp_overlap 676692, overlap 676681 AAAAATTATTTTATT TTTTTATTGAACGAAAGACATAAAT TTCCTTTC ATTTGTGTCTTTCGCTCAATAAAAA CTCTTCTTTTAAAAA TERM 880 676681 - 676739 + F 90 -10.9 -3.68435 | gap 1, opp_overlap 676692, overlap 676681 AAAAATTATTTTATT -TTTTTATTGAACGAAAGACATAAAT TTCCTTTC ATTTGTGTCTTTCGCTCAATAAAAAC TCTTCTTTTAAAAAC AYWB_647 676844 - 678097 + | HD superfamily phosphohydrolase TERM 881 678973 - 678983 + G 71 -2.6 -5.51402 | opp_overlap 678965, overlap 678965 678982 TCAAAAATTAACTGT TAAA TGG TTTA TTTTTTTAAATATGT ksgA 678197 - 679003 + | dimethyladenosine transferase spoVG 679266 - 679565 + | regulatory protein SpoVG TERM 882 679587 - 679602 + F 78 -4 -5.85178 | opp_overlap 679587, overlap 679577 TTACCTTTAAAAAAA TTCCAG TTTT TTGGAA TTTTTTTTACATGTT TERM 883 680040 - 680050 + G 74 -6.8 -4.32857 | TTAATGACTTTAGCT GCTC TAG GAGC TTTATATTTACAAAA TERM 884 681116 - 681132 + G 77 -6.5 -4.80487 | opp_overlap 681109 TCAAAAATTTTTATC CGAAGGT AAA ACCATCG TTTATTTTAGTTGTA zntA 679761 - 681761 + | cation uptake P-type ATPase TERM 885 681777 - 681751 - T 87 -2.5 -6.59152 | opp_overlap 681743, overlap 681737 681736 CTAATAAAAAAAAAA TTAATAAATAA TTTTT TTCTTTATTAA CATCATTATAAAAGA TERM 886 681806 - 681835 + T 93 -12.3 -3.76373 | opp_overlap 681813, overlap 681813 GACAAAACAAAGACA AAAAAAACCACCC CAAA GGGTGGTTTTTTA TTTACATATTAAGGA TERM 887 681813 - 681828 + T 100 -10.4 -5.65927 | opp_overlap 681813, overlap 681806 CAAAGACAAAAAAAA CCACCC CAAA GGGTGG TTTTTTATTTACATA TERM 888 681828 - 681813 - T 100 -10.4 -6.15717 | opp_overlap 681813 681806 CAAAGACAAAAAAAA CCACCC CAAA GGGTGG TTTTTTATTTACATA norM 683382 - 681922 - | Na+-driven multidrug efflux pump TERM 889 682358 - 682333 - G 77 -6.3 -4.74598 | opp_overlap 682335 682348, overlap 682348 682349 CAAAGCCAAAACAAA CATACAAAAAA TAAT TTTTTTGAATG CTTCAAAAACTCTAT AYWB_652 684155 - 683547 - | hypothetical protein AYWB_653 684458 - 684207 - | hypothetical protein TERM 890 684318 - 684334 + g 80 -8.1 -4.11404 | opp_overlap 684312 ATATAAAAACCCTTG TTGCAAA AGA TTTGCAA TTTCTATAGTATGCC rpoZ 684869 - 684624 - | DNA-directed RNA polymerase omega chain gmk 685488 - 684853 - | guanylate kinase TERM 891 685080 - 685092 + g 90 -3.4 -6.11644 | opp_overlap 685080 685091 CACGTTTTTTTAAAC GATC ATAGA GATC TTTTTTTTTAGGTGG TERM 892 685634 - 685619 - R 74 -3.4 -5.55664 | opp_overlap 685625 TCACCACCAAAAAAA TTAATA TTGA TATTAA TATCGATTAATTAAC leuS 688106 - 685641 - | leucyl-tRNA synthetase acpP 688430 - 688200 - | acyl carrier protein TERM 893 688463 - 688453 - R 77 -5.4 -5.00616 | opp_overlap 688453 TTCTCCTTCAAAAAA GCAA TAA TTGC TTAATAATATTATAC TERM 894 688600 - 688634 + r 86 -11.8 -3.15758 | opp_overlap 688600 688604 688610, overlap 688604 TCCATTTACAAGAAA CAAACTAAAATATTTT ATT AAAATAATTTAGTTTG TTAATGAGAAATTAT TERM 895 688634 - 688600 - R 100 -11.8 -4.33417 | opp_overlap 688600 688604, overlap 688604 688610 TCCATTTACAAGAAA CAAACTAAAATATTTT ATT AAAATAATTTAGTTTG TTAATGAGAAATTAT TERM 896 688604 - 688630 + r 73 -6.8 -4.24342 | opp_overlap 688600 688604 688610, overlap 688600 TTTACAAGAAACAAA CTAAAATATTTT ATT AAAATAATTTAG TTTGTTAATGAGAAA TERM 897 688630 - 688604 - R 77 -6.8 -4.73677 | opp_overlap 688604 688600, overlap 688600 688610 TTTACAAGAAACAAA CTAAAATATTTT ATT AAAATAATTTAG TTTGTTAATGAGAAA TERM 898 688668 - 688690 + r 79 -2.8 -6.19443 | overlap 688666 688672 688673 ATTTTGTAATTGTTT TTATTGAAAT AAA ATTTCGTTAA TTTTTTTTTCGTCTA ysdC 689738 - 688668 - | endo-1,4-beta-glucanase TERM 899 689683 - 689697 + g 80 -5.8 -5.14563 | opp_overlap 689683 TGACCTGGAATACCA TTTAAC ATT GTTAAA TTTTTTAATAAAGAA AYWB_659 690348 - 689719 - | hypothetical protein rplT 691170 - 690487 - | 50S ribosomal protein L20P TERM 900 690516 - 690530 + g 83 -5 -5.59564 | opp_overlap 690501 690516 GAGCTTTTTTTAAAG CTGAAA CAA TTTCGG TTTTTTTAAGTTTAT rpmI 691391 - 691185 - | 50S ribosomal protein L35P infC 691853 - 691506 - | protein translation initiation factor 3 TERM 901 692175 - 692150 - R 100 -7.7 -6.17669 | opp_overlap 692150 AATAAAATAAAAAAA GAGAAATATCC AAAG GAACATTTCTC TTCTCTAAAATAACT TERM 902 693134 - 693123 - R 82 -3 -6.25578 | ATTAAAGAAAAAAAA CTAT AATA ATAG AAGGTAGAATGCTTG TERM 903 693573 - 693598 + r 100 -12.1 -3.76815 | opp_overlap 693573 TTTTTGTTACAAAAA TCCTAAACTAT ATAA ATAGTTTAGGA TTTAAAATTTTGCGT TERM 904 693598 - 693573 - R 100 -12.1 -4.82901 | opp_overlap 693573 TTTTTGTTACAAAAA TCCTAAACTAT ATAA ATAGTTTAGGA TTTAAAATTTTGCGT thrS 695586 - 693661 - | threonyl-tRNA synthetase TERM 905 694538 - 694555 + g 95 -4.9 -5.96219 | opp_overlap 694550, overlap 694550 ATACGCAAAGGCAAT TCCTTAT AACT ATGAGGA TTTTTTTTATAAATC AYWB_664 696759 - 695821 - | exopolyphosphatase-related protein trmE 698210 - 696828 - | tRNA modification GTPase TrmE TERM 906 697314 - 697327 + g 82 -5.3 -5.55695 | TAATAAAATTAATTC TGCTT GTAA AAGCA TTTTTTCTGTTCTTA TERM 907 697633 - 697618 - G 73 -7.6 -3.73072 | opp_overlap 697617 AATTGTTTGATTAAA CTTTGG ACTT CCAAAG CAATTTTTTGTTGGG AYWB_666 699324 - 698374 - | exopolyphosphatase-related protein malE 700999 - 699359 - | putative maltose/maltodextrin-binding protein MalE TERM 908 699604 - 699623 + g 73 -4.4 -5.1471 | TTTTAGAATCTTTAT TTTTGGAA GAAT TTTCAAAA TTTATTTTTTCTGGT malG 701864 - 700983 - | ABC-type maltose transport system, permease protein MalG malF 702832 - 701891 - | maltose transport system permease protein MalF malK 703948 - 702833 - | ABC-type maltose/maltodextrin transport system, ATP-binding protein MalK TERM 909 703171 - 703188 + g 78 -5.7 -4.8622 | opp_overlap 703170 GTGAATCTCCAATAG TTACTTT TCCA AAAGTAA TTTTTCCTTCAAAAA TERM 910 704107 - 704078 - R 93 -6.7 -5.4756 | opp_overlap 704081 704086, overlap 704086 704100 AACCCCAACAAAAAA TAAAAAAATGTTT CTAA AAACATTTTATTA TTAAAAAATATTTAA TERM 911 704099 - 704086 - R 84 -3.9 -6.28401 | opp_overlap 704081 704086, overlap 704078 CAAAAAATAAAAAAA TGTTT CTAA AAACA TTTTATTATTAAAAA asnC 705696 - 704185 - | asparaginyl-tRNA synthetase TERM 912 704989 - 704973 - G 73 -3.1 -5.42259 | opp_overlap 704974 704974, overlap 704974 TTACTGTTAAAAAAA CTTTTTT GCC AAAAAAA TCTTTTTTATAATCA TERM 913 705045 - 705055 + g 80 -4 -5.72622 | opp_overlap 705045 TGACAGGTTTGAAAG CATT TGG AATG TTTTTTGTTTGTGGC TERM 914 705535 - 705553 + g 77 -7.6 -4.07885 | opp_overlap 705546 GATGTTTTTGATTTC TTTACAAA CAA TTTGTAAA TTTTCCAAAAAAGTA SEQUENCE gi|85057952|ref|NC_007717.1| Aster yellows witches'-broom phytoplasma AYWB plasmid pAYWB-I, complete sequence (length 3972) TERM 1 723 - 745 + G 93 -11.4 -3.19511 | opp_overlap 718 727 741, overlap 727 GATTGAAGGACCTAG TAGACTCGGT AAA ACCGAGTTTA TATTAAGTTATCTAA TERM 2 741 - 727 - g 80 -10 -2.8194 | opp_overlap 727 723, overlap 718 GAAGGACCTAGTAGA CTCGGT AAA ACCGAG TTTATATTAAGTTAT TERM 3 727 - 741 + G 91 -10 -4.24397 | opp_overlap 718 727, overlap 723 GAAGGACCTAGTAGA CTCGGT AAA ACCGAG TTTATATTAAGTTAT repA 1 - 1119 + | hypothetical protein TERM 4 1331 - 1361 + F 91 -5.5 -5.86332 | gap 1, opp_overlap 1339 1340, overlap 1340 ATTATGATACCCCCT CCTATAAAGTCCCC TTTT GGGGA-TTTAGGGG TTTTTTTTACATTAA TERM 5 1340 - 1353 + F 74 -8.1 -3.71363 | opp_overlap 1340 1339, overlap 1331 CCCCCTCCTATAAAG TCCCC TTTT GGGGA TTTAGGGGTTTTTTT TERM 6 1471 - 1516 + F 91 -9.2 -4.7871 | gap 2, opp_overlap 1510, overlap 1472 1510 CTTAGGTATTTCCTT GCTTATGTGTGC--GCGCTGTA GGAT TCCAGCGCAAGCACACATAAGG TTTTTCCTAATGATT TERM 7 1472 - 1515 + F 95 -12.7 -3.46141 | gap 2, opp_overlap 1510, overlap 1471 1510 TTAGGTATTTCCTTG CTTATGTGTGC--GCGCTGTA GGAT TCCAGCGCAAGCACACATAAG GTTTTTCCTAATGAT TERM 8 1548 - 1571 + F 100 -6.8 -5.65177 | opp_overlap 1553, overlap 1549 TTTATACACACATTT ATACACACAT TGCA ATGTGTGTAC TTTTTTTATCAATGT TERM 9 1549 - 1570 + F 88 -10.3 -3.9748 | opp_overlap 1553, overlap 1548 TTATACACACATTTA TACACACAT TGCA ATGTGTGTA CTTTTTTTATCAATG TERM 10 1671 - 1699 + F 75 -9.6 -2.52896 | opp_overlap 1670 1666 1662 1673 CGAGAACGAACCAAC CACCTTTGCTGC GTTAG GCAGTAAAGGAG TAGGTTGGAGAGTCA TERM 11 1697 - 1673 - f 72 -8.6 -2.87756 | opp_overlap 1671, overlap 1670 1666 1662 AGAACGAACCAACCA CCTTTGCTGC GTTAG GCAGTAAAGG AGTAGGTTGGAGAGT TERM 12 1729 - 1743 + F 75 -8.6 -3.53262 | opp_overlap 1729, overlap 1725 AATAATTAAAAAAAA CTTGTC GCA GACAAG TTGCATTTTTATTAT TERM 13 1743 - 1729 - f 100 -8.6 -6.00814 | opp_overlap 1725 1729 AATAATTAAAAAAAA CTTGTC GCA GACAAG TTGCATTTTTATTAT TERM 14 1880 - 1923 + F 100 -7 -5.54907 | TGTTAAAATAATTAA TGACTCTATGTATATGTT TGTCAGAT GACATATATGTAGGGTCA TTTTTGTTTTGTAAA TERM 15 2008 - 1962 - f 100 -7.6 -5.9362 | TAAAATATAAAAAAA TAGTTATATAAATCCCACTCTC GCA AAGACAAAGATTTATATAACTA TCCACGAAAGGATGC AYWB_pI02 2029 - 2499 + | hypothetical protein TERM 16 2554 - 2526 - g 91 -8.3 -5.03945 | opp_overlap 2526 2525, overlap 2535 CAATAATCACAAAAA CCCAAAAAATAAA ATA TTTATCATTTGGG GTTTATTTATTAGTG AYWB_pI03 2503 - 2988 + | hypothetical protein AYWB_pI04 2991 - 3584 + | hypothetical protein ssb 3608 - 3922 + | single-stranded DNA binding protein SEQUENCE gi|85057958|ref|NC_007718.1| Aster yellows witches'-broom phytoplasma AYWB plasmid pAYWB-II, complete sequence (length 4009) TERM 1 190 - 170 - g 71 -2.5 -5.49809 | opp_overlap 172, overlap 172 TAAATGGTAAAAAAA TAGGAGATC TAA AATCCCCTC ATTATCATATATATT rep 1 - 1149 + | replication protein TERM 2 1289 - 1332 + F 90 -7.6 -5.24796 | TGTTAAAATAATTAA TGACTCTATATATATGTGCG TCCG TGTGCTTATATGTAGGGTCA TTTTTGTTATCTAAA TERM 3 1421 - 1374 - f 79 -3.8 -6.08563 | gap 1 AATATATAAAAAAAA TAGTTATATAAATCCCGAATCTC CCA AAGACA-AAGATTTATATAACTA CCATGAAAGGATGCA AYWB_pII02 1441 - 1911 + | hypothetical protein TERM 4 1966 - 1938 - g 91 -8.3 -5.03945 | opp_overlap 1938 1937, overlap 1947 CAATAATCACAAAAA CCCAAAAAATAAA ATA TTTATCATTTGGG GTTTATTTATTAGTG TERM 5 2112 - 2102 - g 70 -5.4 -4.61648 | opp_overlap 2102 AACAAGAACAACAAA CCTA TAA TAGG GTTATTAATAAGATA AYWB_pII03 1915 - 2397 + | hypothetical protein ssb 3013 - 3327 + | single-stranded DNA binding protein SEQUENCE gi|85057963|ref|NC_007719.1| Aster yellows witches'-broom phytoplasma AYWB plasmid pAYWB-III, complete sequence (length 5104) TERM 1 723 - 745 + G 93 -11.4 -3.19511 | opp_overlap 718 727, overlap 727 TATTGAAGGACCTAG TAGACTCGGT AAA ACCGAGTTTA TATTAAGTTATCTAA TERM 2 741 - 727 - g 80 -10 -2.8194 | opp_overlap 727 723, overlap 718 GAAGGACCTAGTAGA CTCGGT AAA ACCGAG TTTATATTAAGTTAT TERM 3 727 - 741 + G 91 -10 -4.24397 | opp_overlap 718 727, overlap 723 GAAGGACCTAGTAGA CTCGGT AAA ACCGAG TTTATATTAAGTTAT repA 1 - 1107 + | hypothetical protein TERM 4 1298 - 1277 - T 100 -6.1 -5.81032 | opp_overlap 1277 TAAGCTTAAAAAAAA TAAAATTTA GTTC TAAATTTTA TTTAATTATATTTAT TERM 5 1731 - 1706 - T 100 -7.6 -5.61689 | opp_overlap 1709, overlap 1709 AAAATCAATAAAAAA TAAGCCCCTA ATTTAA TAGGGGCTTT AAAAATATAAAAATT TERM 6 1728 - 1709 - T 91 -9.3 -4.82661 | opp_overlap 1709, overlap 1706 ATCAATAAAAAATAA GCCCCTA ATTTAA TAGGGGC TTTAAAAATATAAAA TERM 7 1709 - 1728 + T 80 -9.3 -3.59262 | opp_overlap 1709 1706 ATCAATAAAAAATAA GCCCCTA ATTTAA TAGGGGC TTTAAAAATATAAAA TERM 8 2159 - 2136 - T 91 -12.6 -3.05022 | opp_overlap 2136 TTTTTTATACATATA GCATACACAT TGCA ATGTGTATGC TTTTTTTAAAATGTG TERM 9 2136 - 2159 + T 100 -12.6 -5.45726 | opp_overlap 2136 TTTTTTATACATATA GCATACACAT TGCA ATGTGTATGC TTTTTTTAAAATGTG TERM 10 2247 - 2275 + T 78 -10.3 -2.52896 | opp_overlap 2246 2247 CGAGAACGAAACAAC CGCCTTTGCTGCT TTA GGCAGTAAAGGAG TAGGTTGGAGAGTCC TERM 11 2396 - 2439 + T 95 -9.1 -5.29716 | opp_overlap 2396 TGTTAAAATTATAAA TGACTCTATATATATGTTC GTCCAA GTACGTATATGTAGGGTCA TTTTTGTTATATTAA TERM 12 2480 - 2505 + T 83 -10.6 -2.80935 | opp_overlap 2480, overlap 2483 AAAAATATAAAAAAA TAACTCCCTA TTATTT TAGGGAGTTA TATAATAAATAAAAT TERM 13 2505 - 2480 - T 100 -10.6 -5.9667 | opp_overlap 2480 2483 AAAAATATAAAAAAA TAACTCCCTA TTATTT TAGGGAGTTA TATAATAAATAAAAT TERM 14 2483 - 2502 + T 72 -7.9 -3.55447 | opp_overlap 2480, overlap 2480 AATATAAAAAAATAA CTCCCTA TTATTT TAGGGAG TTATATAATAAATAA AYWB_pIII02 3165 - 2542 - | hypothetical protein AYWB_pIII03 3278 - 3694 + | hypothetical protein AYWB_pIII04 3733 - 3885 + | hypothetical protein AYWB_pIII05 3933 - 4208 + | hypothetical protein AYWB_pIII06 4211 - 4582 + | hypothetical protein ssb 4678 - 5052 + | single-stranded DNA binding protein SEQUENCE gi|85057971|ref|NC_007720.1| Aster yellows witches'-broom phytoplasma AYWB plasmid pAYWB-IV, complete sequence (length 4316) TERM 1 73 - 53 - g 78 -5.6 -4.90918 | ATAAAATTAATAAAA CTAAAATA GAAAA TATTTTAG AACTTAAAAAAAAAG rep 1 - 1128 + | replication protein TERM 2 1269 - 1312 + F 100 -7.6 -5.54907 | ATGTTAAAATAATTA TGACCTTATATATATGTTCG TTGC TGTGCGTATATGTAGGGTCA TTTTTGTTTTGTAAA TERM 3 1400 - 1352 - f 100 -10.7 -6.18768 | AAAATATAAAAAAAA TAGTTATATAAATCAACCCTCTT CGC AAAAGAAACGATTTATATAACTA TCATGAAAGGATGCA AYWB_pIV02 1420 - 1890 + | hypothetical protein TERM 4 1945 - 1917 - g 91 -8.3 -5.03945 | opp_overlap 1917 1916, overlap 1926 CAATAATCACAAAAA CCCAAAAAATAAA ATA TTTATCATTTGGG GTTTATTTATTAGTG TERM 5 2091 - 2081 - g 70 -5.4 -4.61648 | opp_overlap 2081 AACAAGAACAACAAA CCTA TAA TAGG GTTATTAATAAGATA AYWB_pIV03 1894 - 2376 + | hypothetical protein AYWB_pIV04 2369 - 2929 + | hypothetical protein ssb 2951 - 3265 + | single-stranded DNA binding protein TERM 6 3297 - 3268 - f 86 -6.4 -5.13648 | opp_overlap 3273, overlap 3273 TAAAGATAAATAAAA CAAAGGCCCCTA TTAATT TAGGGGCTTTAG ATAGAAAGTATTATA TERM 7 3292 - 3273 - f 80 -9.3 -3.57927 | opp_overlap 3273, overlap 3268 ATAAATAAAACAAAG GCCCCTA TTAATT TAGGGGC TTTAGATAGAAAGTA TERM 8 3273 - 3292 + F 80 -9.3 -3.6502 | opp_overlap 3273 3268 ATAAATAAAACAAAG GCCCCTA TTAATT TAGGGGC TTTAGATAGAAAGTA AYWB_pIV06 3316 - 3651 + | hypothetical protein