TransTermHP v2.07 (built on Jan 21 2009) 25 bins; sample size is 20000000 --pval-conf=/fs/szasmg2/carlk/TTupdate2/expterm.dat --gc=-2.3 --au=-0.9 --gu=1.3 --mm=3.5 --gap=6 --max-len=59 --min-stem=4 --max-loop=13 --min-loop=3 --uwin-length=6 --uwin-require=3 --max-hp-score=-2 --max-tail-score=-2.5 --loop-penalty=1,2,3,4,5,6,7,8,9,10,11 --start-cut=0 --end-cut=25 Genes: 0.594525 %AT, 1114137 nt, 8171 terms. Intergenic: 0.653617 %AT, H2T: 274057 nt, 1927 terms; T2T: 113429 nt, 1707 terms; H2H: 100920 nt, 1444 terms. Each terminator entry starts in column 3 and is of the form: term # start - end +/- regionconf hp tail | notes Followed by the sequence of the 5' tail, 5' stem, loop, 3' stem, and 3' tail. Genes are interspersed, and start the first column. SEQUENCE gi|49473688|ref|NC_005955.1| Bartonella quintana str. Toulouse, complete genome (length 1581384) TERM 1 692 - 668 - g 72 -8.7 -3.53012 | overlap 683 GTTTTGCTGTTGAAA GTTATACTGAT CGA ATCAGTATAGC TGAAGAATTGATCTA BQ00010 1 - 843 + | hypothetical protein maf-1 840 - 1436 + | septum formation maf protein aroE 1429 - 2310 + | shikimate 5-dehydrogenase TERM 2 2738 - 2721 - g 71 -4.8 -4.63863 | GCAATACAAAAAGAA CGGACA ATGACG CGTCCG GATATGAATGAAAAA coaE 2307 - 2894 + | dephospho-CoA kinase dnaQ 2899 - 3606 + | DNA polymerase III epsilon chain TERM 3 3702 - 3664 - f 93 -7.4 -5.61824 | opp_overlap 3666, overlap 3666 3667 3692 3695 CAAAAGCTAAAAAAA TACGGTCGTTGTGGGG AGGGGAA CACCACAACGACCCTG TCGTTACACCGTACC TERM 4 3666 - 3700 + F 76 -10 -2.90392 | opp_overlap 3666 3664 3667 3692 3695 AAAGCTAAAAAAATA CGGTCGTTGTGGGG AGGGGAA CACCACAACGACCC TGTCGTTACACCGTA TERM 5 3700 - 3666 - f 100 -10 -4.41528 | opp_overlap 3666, overlap 3664 3667 3692 3695 AAAGCTAAAAAAATA CGGTCGTTGTGGGG AGGGGAA CACCACAACGACCC TGTCGTTACACCGTA TERM 6 3699 - 3667 - f 93 -13.5 -3.22477 | opp_overlap 3666, overlap 3666 3664 3692 3695 AAGCTAAAAAAATAC GGTCGTTGTGGGG AGGGGAA CACCACAACGACC CTGTCGTTACACCGT TERM 7 4119 - 4136 + G 74 -4.9 -4.75308 | gap 1, overlap 4110 CTATCGGCATTGTTC CAAC-GCA TTT TGCTGTTG TTTTTGACTATTCAT TERM 8 5008 - 5021 + G 74 -5.3 -4.72272 | opp_overlap 5008 GACAATTAAAAGGGA TGCTT ATCT AAGCA TTTTTGATGAAGAAA TERM 9 5060 - 5082 + G 93 -11.4 -4.30576 | AAGTGGTTATCTGAA GCAAAAGAGC AAG GCTTTTTTGC TTTTGATACTGAAAC TERM 10 5113 - 5133 + G 71 -3.9 -4.87893 | overlap 5117 AACGTCACTTGATCC TCTGCAAGC AAA GCTTGTTGG TTTTTCGTTAGCATT TERM 11 5117 - 5129 + G 73 -7.7 -3.88182 | overlap 5113 TCACTTGATCCTCTG CAAGC AAA GCTTG TTGGTTTTTCGTTAG polA 3938 - 6844 + | DNA polymerase I BQ00070 7738 - 6851 - | hypothetical protein TERM 12 7778 - 7801 + r 100 -12.6 -4.74103 | opp_overlap 7778 CTAAAAACTAAAAAA CCTTGTTTCT CAAA AGAAACAAGG TTTTTAAATTGAGCG TERM 13 7801 - 7778 - R 100 -12.6 -5.54079 | opp_overlap 7778 CTAAAAACTAAAAAA CCTTGTTTCT CAAA AGAAACAAGG TTTTTAAATTGAGCG BQ00080 8602 - 7829 - | hypothetical protein lspA 10359 - 9856 - | lipoprotein signal peptidase BQ00100 11221 - 10385 - | tRNA/rRNA methyltransferase BQ00120 12597 - 12328 - | hypothetical protein TERM 14 12424 - 12414 - G 72 -4.6 -4.69053 | TACTACTTAATAAAA CGCC GAG AGCG AAAAAAATAAAGAGC ihfB 12884 - 12606 - | integration host factor subunit beta TERM 15 12752 - 12787 + g 71 -6.2 -4.16016 | gap 1, opp_overlap 12746, overlap 12753 12759 CTCCAAAACCGCGAA GTTCAAC-GCGATTGCC ATT GGCAAGTGCTGTTGAAA TTTCTTCAAAAATAG TERM 16 12753 - 12786 + g 72 -9.7 -3.09288 | gap 1, opp_overlap 12746, overlap 12752 12759 TCCAAAACCGCGAAG TTCAAC-GCGATTGCC ATT GGCAAGTGCTGTTGAA ATTTCTTCAAAAATA TERM 17 13134 - 13148 + G 71 -5 -4.56775 | opp_overlap 13134 CTTTTTGTAAGAAAT CATCTT TTA GAGATG TTTTTAAAAAAGCAT BQ00140 13076 - 13744 + | hypothetical protein TERM 18 14217 - 14207 - g 70 -3.2 -4.9725 | AGGTTTATATAAAAA TCGC CAC GCAA ATTGCTACAGGTGAT BQ00150 13858 - 14436 + | hypothetical protein BQ00160 14443 - 15237 + | ABC transporter/ATP-binding protein TERM 19 15415 - 15365 - f 81 -10.8 -2.87931 | opp_overlap 15366, overlap 15382 TTTATTTTTGATATA CTTTTCTTTCACATAAAGTAAGAA TAA TTATTACCTTATGTGAAAGAAACT ATAATGATCTCATTA TERM 20 15366 - 15414 + F 84 -12.1 -2.85378 | opp_overlap 15365 15382 TTATTTTTGATATAC TTTTCTTTCACATAAAGTAAGAA TAA TTATTACCTTATGTGAAAGAAAC TATAATGATCTCATT ptsN 16415 - 16879 + | nitrogen regulatory IIA TERM 21 18009 - 18029 + F 72 -4.7 -4.82901 | opp_overlap 18009 CATATTTTTTAAAAT TCCATTGCT TAA AGCAGTAGA TTTTTATACAAAAAA TERM 22 18167 - 18179 + F 76 -6.3 -4.64598 | CTGTTCTGATTGGTG CGAAA ATA TTTCG TTTTTGAGGTGGTTG BQ00180 18280 - 18789 + | hypothetical protein BQ00190 18831 - 20060 + | hypothetical protein TERM 23 23104 - 23120 + G 76 -4.5 -5.06414 | GTTGGTGCAATTTGC CATTAAA TAT TTTGATG TTTTTGTTAAACCAA lysK 21803 - 23464 + | lysyl-tRNA synthetase TERM 24 23692 - 23704 + G 77 -4.9 -4.87807 | GTGATGACATTTGAA TATGA AAA TCATA TTTTTAATCTGTTAG TERM 25 24238 - 24257 + G 77 -8 -4.26076 | TTTGGTGTTCGTGAT TTGATCAA TGCG TTGATCAA TTTTGGTCCAAGTCC TERM 26 24603 - 24590 - g 79 -3.1 -5.37345 | CGGAAGGAGAAAAAA TCCTC TTTA AAGGA GTACCCAATTTTGCA TERM 27 24680 - 24669 - g 74 -4.4 -4.83759 | opp_overlap 24669 AATGAAAGCGAAAAA GCTT AAAG AAGC TTTACAACAAATGGC prfC 23464 - 25041 + | peptide chain release factor 3 TERM 28 25118 - 25096 - T 93 -6.2 -5.85011 | opp_overlap 25100, overlap 25097 GAAAAATCAAAAAAA GGGAGAGGCA AGA TTCCTCTCCT TAAAAAAAATCATTA TERM 29 25117 - 25097 - T 87 -9.7 -4.07346 | opp_overlap 25100, overlap 25096 AAAAATCAAAAAAAG GGAGAGGCA AGA TTCCTCTCC TTAAAAAAAATCATT trxA 25466 - 25143 - | thioredoxin addA 29050 - 25577 - | ATP-dependent nuclease subunit A TERM 30 25942 - 25954 + g 87 -3.3 -5.76949 | opp_overlap 25942 AAATCTGCCAAATAT GACGC AGC GCATC TTTTTTTTGAGACTC TERM 31 27013 - 26997 - G 89 -9.5 -4.17089 | opp_overlap 26996 TTTAAATTTTCAAAA GCATCTT TAA AAGATGC ATGTGATAGTGCGTG TERM 32 27332 - 27342 + g 70 -5.4 -4.38203 | overlap 27337 CATTAAGCGTCCTTT TGCT GGA AGCA TTTCTTCGTTGTGTA TERM 33 28855 - 28837 - G 71 -5.2 -4.58685 | opp_overlap 28851 28852 28854, overlap 28838 AAAGTGTGCGAAAAA TCCGCGAT TGC ATCACGGC TGCCGCTGCTTTTGT TERM 34 28854 - 28838 - G 70 -8.7 -3.34488 | opp_overlap 28851 28852, overlap 28837 AAGTGTGCGAAAAAT CCGCGAT TGC ATCACGG CTGCCGCTGCTTTTG BQ00260 32166 - 29047 - | hypothetical protein TERM 35 29514 - 29525 + g 74 -4.4 -5.00616 | GTGTTACACCTGTTG TACC TATG GGTA TTTTTTGAGAAACCA TERM 36 33649 - 33638 - R 71 -3 -5.07652 | GCTTTTAAAATAAAA TGAA TGCT TTCA ACAAAAAAACGGGTA BQ00270 35416 - 33914 - | chlorosome protein TERM 37 34876 - 34849 - G 70 -8.6 -3.4252 | opp_overlap 34845 34849 GTGCATCCATGAGAA CTTCTTGATGAT GTCC ATGATCAAGAAG TTCATAAGTTCGGGC BQ00280 37935 - 35491 - | sensor histidine kinase protein TERM 38 37697 - 37687 - G 73 -5.4 -4.57341 | opp_overlap 37687 AATTGTTTTCAAAAA CTTC TGT GAAG CTTTTTTTGCATGCA ahcY 39372 - 37975 - | S-adenosyl-L-homocysteine hydrolase BQ00300 41069 - 40065 - | NADH-ubiquinone oxidoreductase folC 42426 - 41107 - | folylpolyglutamate synthase accD 43350 - 42430 - | acetyl-CoA carboxylase subunit beta TERM 39 43731 - 43706 - R 100 -7.7 -5.95539 | TCTGAAACAAAAAAA GCCTTATTTAT AAAT ATCAATAAGGC TAAAGAGTCTATAAA TERM 40 44376 - 44350 - R 74 -2.4 -5.57396 | gap 1 AGAATCAATAAAAAA GCTCCCAATCA TAGCTG TAATT-GGAGC AATTAAAAAGTCTAT TERM 41 45342 - 45362 + r 83 -7.1 -4.73973 | overlap 45351 GCAGGTATTTTCGTG TAATTTTAT GAG ATAAAATTA TTTCTTATTTTATGT dfp 46834 - 45452 - | bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase aarF 48490 - 46904 - | ubiquinone biosynthesis protein Aarf TERM 42 47522 - 47533 + g 70 -3 -5.02074 | opp_overlap 47522 AAGAATTTCAGCAAG GAAA TGTT TTTC TTTTTTGCCAAGTCG ubiE 49275 - 48493 - | ubiquinone/menaquinone biosynthesis methyltransferase TERM 43 49068 - 49047 - G 75 -9.5 -3.28416 | CACCAGCTACATCAA GCACTTTCC AGTT AGAAAGTGC TGGTGGAGAAAGCCA gyrB 51825 - 49393 - | DNA gyrase subunit B BQ00380 52812 - 53681 + | ABC transporter, periplasmic amino acid-binding protein comM 55226 - 53694 - | competence protein comM TERM 44 55458 - 55440 - H 83 -6 -5.09204 | opp_overlap 55440 ATATGTTAAGAAAAA CAAAGAGC GAG GCTGTTTG TGTTGCACATCAAGT TERM 45 55567 - 55578 + H 82 -3 -5.69793 | opp_overlap 55567 TGAAAATTCCAAACA GATA TATT TATC TTTTTTGTTTAATGT BQ00400 55641 - 57602 + | hypothetical protein TERM 46 59908 - 59885 - g 76 -3.1 -5.28942 | overlap 59879 GATGGCAAACAAAAA GCCAATGTG AAGGCG CACGTTGAC CATTTGGATTTTGCA TERM 47 60493 - 60479 - g 91 -10 -4.57755 | opp_overlap 60478 60477 ACCTATGATATAAAA GGTGAG GGC CTCACC ACTGTTGCTTTTCAA TERM 48 61574 - 61591 + G 78 -4.1 -5.28176 | TTATTAAATATGCGT CTGACTG CGCA CAATCAG TTTTTTGTACGTGGG BQ00410 57602 - 62248 + | hypothetical protein msbA 64043 - 62277 - | ABC transporter, ATP-binding protein infC 64784 - 64266 - | translation initiation factor IF-3 TERM 49 65353 - 65343 - g 81 -5.4 -5.00895 | GCTAGCACAGAAAAA CAAG AGG CTTG CTGGCATGGTGTTGA BQ00440 64981 - 65778 + | hypothetical protein TERM 50 66329 - 66363 + G 83 -10.8 -3.73302 | AGATGGGCGTCTCTC TTTTTCTTGGCGCCTT GTT ATGGCGCCAAAAGAAA TTGTTGAGTATATTG BQ00450 65796 - 66542 + | hypothetical protein dapE 66765 - 67937 + | succinyl-diaminopimelate desuccinylase hemN 69236 - 68037 - | coproporphyrinogen III oxidase TERM 51 68928 - 68955 + g 71 -9.9 -2.84126 | overlap 68926 68927 68930 AAAACGGTTTGCTTC CACACTGGATG GGTTGG CTTCCAGTGTG ATTTCAGCTTTATCA BQ00480 69880 - 69233 - | putative deoxyribonucleotide triphosphate pyrophosphatase hrcA 70197 - 71267 + | heat-inducible transcription repressor grpE 71392 - 72054 + | heat shock protein (hsp-70 cofactor) grpE TERM 52 72150 - 72163 + T 70 -8.1 -3.22215 | opp_overlap 72150, overlap 72148 TCAAAGAGTTCTAAA GGGTG TTAA CACCC TCCTTTTATCCTTGA TERM 53 72163 - 72150 - T 73 -8.1 -3.62518 | opp_overlap 72148 72150 TCAAAGAGTTCTAAA GGGTG TTAA CACCC TCCTTTTATCCTTGA BQ00510 72708 - 72169 - | ABC transporter (permease) TERM 54 72824 - 72806 - R 74 -2.3 -5.48787 | ATAATATATAAAAAA GCGGCTA AAAAA TGGCCAC CATAATTGTAAATTG TERM 55 73286 - 73256 - R 88 -7.9 -5.14645 | gap 1, opp_overlap 73262 73268, overlap 73260 AGAAGCCAATAAAAA TAATGATAAGAAGA AGTT TCTTCTTATC-TTA GGGATGATTAACTGC TERM 56 73283 - 73260 - R 89 -11.2 -3.3707 | opp_overlap 73262 73268, overlap 73256 GCCAATAAAAATAAT GATAAGAAGA AGTT TCTTCTTATC TTAGGGATGATTAAC TERM 57 73304 - 73337 + r 71 -5.5 -4.48713 | gap 1 GATGATTAACTGCTT TTTGG-GGTGAGAA ACTCTAG TTCTCATCTCCAAA TTTATTGTTGATAAG ptsH 73616 - 73320 - | phosphocarrier protein BQ00530 74034 - 73627 - | fructose-specific IIA component BQ00540 74631 - 74167 - | hypothetical protein BQ00550 76439 - 74655 - | two-component sensor histidine kinase TERM 58 75831 - 75815 - G 73 -9.5 -3.14132 | CTTGCTCTCTATCAA TGGCAAT ACC ATTGCCA TAAAAGGCGTTTGAA BQ00560 77201 - 76479 - | transcriptional regulator TERM 59 77569 - 77579 + H 89 -3.2 -5.81622 | ACTGCACGAAAGGAG TCCA TAA TGGG TTTTTTTAATTTTGT BQ00570 77575 - 78030 + | hypothetical protein TERM 60 78048 - 78060 + T 76 -4.1 -5.08169 | TCACTCAGACAAGGG GCGAA TCT TTTGC TTTTTTACGGTGTGT TERM 61 78127 - 78096 - T 100 -11.8 -5.27938 | opp_overlap 78102 78114, overlap 78099 78114 AGCGCTAAACAAAAA TAAGAAGTGTGAAA AAGT TTTCACACTTCTAA AGTTGAAATATTGAT TERM 62 78124 - 78099 - T 100 -13.5 -4.72696 | opp_overlap 78102 78114, overlap 78096 78114 GCTAAACAAAAATAA GAAGTGTGAAA AAGT TTTCACACTTC TAAAGTTGAAATATT TERM 63 78102 - 78121 + T 79 -9.4 -3.36671 | opp_overlap 78099 78096 78114, overlap 78114 AAACAAAAATAAGAA GTGTGAAA AAGT TTTCACAC TTCTAAAGTTGAAAT BQ00580 78717 - 78169 - | hypothetical protein TERM 64 81001 - 81013 + G 70 -7.7 -3.75465 | overlap 80998 GCTCCGCGTGGCGTG CCTCA GAT TGAGG TTACTTTTGATATTG dnaK 79609 - 81501 + | molecular chaperone DnaK TERM 65 81557 - 81532 - f 75 -6.9 -4.21974 | gap 1, opp_overlap 81531 81528 81525 TGATCAGGTAATAAA CCCAGCCTT-TG AAA CATAAGGATGGG CTTTATTATTTGAGA TERM 66 82723 - 82707 - g 84 -6.7 -4.94902 | GAATTATTACAAAAA TTTGAAA AGC TTTCAAA TCATGAGAATTCACC dnaJ1 81660 - 82802 + | heat shock protein DnaJ TERM 67 83620 - 83631 + F 83 -5.8 -5.03994 | GGTTTAATGCTTCCT CTGC TGTT GCAG TTTTTATATGTCAGA argB 84547 - 85452 + | acetylglutamate kinase BQ00630 85475 - 86383 + | hypothetical protein TERM 68 86433 - 86458 + F 76 -2.6 -5.44198 | TATGATTTTATTTCG TGATATTTCC ACTTGA GGAGATTTCA TTTTTGTTGTTTCTT lepA 86968 - 88773 + | GTP-binding protein LepA TERM 69 88794 - 88781 - T 93 -8.1 -5.72254 | opp_overlap 88781 GTAAATAATAAAAAA GGGAG AATT CTCCC TCATTAATTGCACTT TERM 70 88803 - 88814 + T 73 -4.4 -4.96388 | TTCTCCCTCATTAAT TGCA CTTT TGCA TTTTGTTTCCTGGTT dapD 89698 - 88850 - | 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase BQ00660 89804 - 90667 + | hypothetical protein truA 91443 - 90700 - | tRNA pseudouridine synthase A fmt 92374 - 91445 - | methionyl-tRNA formyltransferase def 92904 - 92374 - | polypeptide deformylase TERM 71 92493 - 92472 - G 70 -2.9 -5.1356 | opp_overlap 92473 92474, overlap 92473 92474 TGTGATCAATAAAAA GGCGACCAT TTAA ATGGTCGAT TTCGTGTTGCAAACA TERM 72 92491 - 92474 - G 71 -9.9 -2.79725 | opp_overlap 92474 92473, overlap 92473 92472 TGATCAATAAAAAGG CGACCAT TTAA ATGGTCG ATTTCGTGTTGCAAA TERM 73 92474 - 92491 + g 72 -9.9 -2.95073 | opp_overlap 92473 92472 92474, overlap 92473 TGATCAATAAAAAGG CGACCAT TTAA ATGGTCG ATTTCGTGTTGCAAA TERM 74 94022 - 94008 - g 73 -7.2 -4.03234 | CGCGCTTTACAGAAA CACTTT TAC AAAGTG GGCGAGGATATTGAA BQ00700 92994 - 94178 + | hypothetical protein BQ00710 94286 - 94873 + | hypothetical protein TERM 75 95074 - 95060 - T 81 -5.8 -4.84761 | opp_overlap 95060 ATATTTTTATAAAAA TCTTTT TTG AAAAGA AGATCTTGTTTCAAG TERM 76 95134 - 95113 - T 88 -7.3 -5.09762 | overlap 95115 AGTTCAACATAAAAA TCTGGCAGA ATGA TCCGCCAAA TAAAATTGATCAACA BQ00720 96553 - 96302 - | hypothetical protein ibpA1 97010 - 96579 - | heat shock protein TERM 77 97417 - 97453 + G 71 -3.8 -4.90266 | gap 2, opp_overlap 97427, overlap 97415 97412 97420 TACAGTTGGGCTTTG GCGTGCAAAAGCACGCAA TGT TTACGCGCTTT-GCA-GC TTTTTAATTGATCAG TERM 78 97445 - 97427 - g 73 -7.4 -4.07568 | opp_overlap 97415 97412 97420 97417 CTTTGGCGTGCAAAA GCACGCAA TGT TTACGCGC TTTGCAGCTTTTTAA nth 97118 - 97858 + | endonuclease III TERM 79 98056 - 98042 - g 74 -5 -4.68994 | ATCATCAGCTAAAAA GCGATT TAA AATCAC TGCGTCAGGCAAAGT rpmI 98007 - 98210 + | 50S ribosomal protein L35 rplT 98244 - 98645 + | 50S ribosomal protein L20 TERM 80 98683 - 98708 + F 93 -5.3 -6.09888 | ACATTCATTCGGGAT CCCGTTCTGGT TTTT GCTAGTGCGGG TTTTTTTTATTCAAA TERM 81 99720 - 99734 + G 90 -4.9 -5.55664 | GTTAAAATACGGTAT GCCTG ATTTG CGGGC TTTTTTTGATGCTGA pheS 98740 - 99825 + | phenylalanyl-tRNA synthetase alpha chain TERM 82 100135 - 100157 + G 75 -9.9 -3.28261 | gap 1, overlap 100135 TGGTGTTCTTGCGTT G-CCAGGCAC TTAT GTGCCTGGGC TTGATGTGACCTTAT TERM 83 100135 - 100156 + G 72 -10.1 -2.56475 | overlap 100135 TGGTGTTCTTGCGTT GCCAGGCAC TTAT GTGCCTGGG CTTGATGTGACCTTA TERM 84 100456 - 100469 + G 80 -2.3 -5.63857 | TGTGTCTTCCTTTGA AACGC CGTT GCGTG TTTTTTTAGATTTTT TERM 85 101624 - 101612 - g 77 -6.3 -4.59109 | GATACCCCTGAAAAA CAACA GAG TGTTG CTGGTGGTATTCGCC pheT 99857 - 102271 + | phenylalanyl-tRNA synthetase subunit beta TERM 86 102303 - 102324 + F 100 -10.9 -4.63993 | opp_overlap 102302, overlap 102300 ATTATTTTATAAAGC GGGAGCACT TTTG AGTGCTCTC TTATTTTTTGGCATT yfeA 102546 - 103454 + | Iron transport protein yfeA yfeB 103451 - 104278 + | Iron transport protein yfeB TERM 87 104494 - 104517 + G 86 -8.2 -5.00616 | gap 1, overlap 104498 GCTTTTTTTTCTGGT GGGC-TTGCTG CGG CAGCAATGCTC TTTTTTAACCACCGG TERM 88 104541 - 104573 + G 70 -3.6 -4.90519 | gap 1, opp_overlap 104548, overlap 104548 CCACCGGACAAAGCT GAAAGAA-GATACCA TTAT TGGTCTCATTTTTTC TTCTTTTTTTGCTTT yfeC 104275 - 105141 + | Iron transport system membrane protein yfeC yfeD 105138 - 106043 + | Iron transport system membrane protein yfeD TERM 89 106210 - 106234 + F 93 -4.3 -6.09196 | opp_overlap 106210 ATTCGTTAATTAAGA GGCTGCA TTGATTTATTC TGCAGCC TTTTTTTATTTTGGG BQ00830 106455 - 106841 + | hypothetical protein pncB 108538 - 107234 - | nicotinate phosphoribosyltransferase BQ00850 117237 - 108670 - | cyclic beta 1-2 glucan synthetase TERM 90 109266 - 109287 + g 83 -7.3 -4.70879 | opp_overlap 109263 CATCACACAAATGCT CAAGCATTG AGAC CATTGCTTG TTTTTGGCGTTTAGG TERM 91 110463 - 110475 + g 74 -4.8 -4.7173 | ATGCTGATAGAAATG TCGC TTGTT GCGA TTTTTCGATGTGATA TERM 92 111037 - 111014 - G 71 -7.5 -3.9093 | overlap 111015 CGTATCACATAATAA CTATGGTGG TTAAAG CCACCATAA CCATTCCAATACTGT TERM 93 113333 - 113322 - G 75 -5.8 -4.66833 | opp_overlap 113321 113323, overlap 113323 TTGCAATTGCAAAAA GGCT CGAG AGCC GTGCTTCTGAAGCTA TERM 94 113363 - 113373 + g 70 -3.2 -4.87892 | AACAGGTCATAACAA CTTG TAT CGAG TTTATTTTCTTGAAC TERM 95 114237 - 114251 + g 81 -2.8 -5.69473 | GCCATGTCTGTCGTG CAATAC ATC GTAATG TTTTTTTATCCTCTG TERM 96 117414 - 117392 - R 93 -4.7 -6.09196 | TGGAAAATAAAAAAA GGCCGCCAG AGAAA CAAGCGACC TAAGTTTAATTTATT rpsA 119138 - 117438 - | 30S ribosomal protein S1 cmk 119919 - 119272 - | cytidylate kinase aroA 121244 - 119916 - | 3-phosphoshikimate 1-carboxyvinyltransferase BQ00890 121433 - 121813 + | hypothetical protein mutS 127948 - 125213 - | DNA mismatch repair protein maeB 128158 - 130455 + | malic enzyme secB 130983 - 130507 - | preprotein translocase subunit SecB TERM 97 130608 - 130595 - G 75 -8.1 -3.97368 | opp_overlap 130594 130595, overlap 130604 GGGTCAATCCATAAA GGTGG AAAA CCACC ATTTTGGGTGGCATC TERM 98 130619 - 130604 - G 71 -6.1 -4.18161 | opp_overlap 130595 130594, overlap 130595 CATAAAGGTGGAAAA CCACC ATTTTG GGTGG CATCAGATATAATTT BQ00960 131628 - 131125 - | hypothetical protein TERM 99 132045 - 132015 - g 82 -11.4 -3.10579 | opp_overlap 132000, overlap 132000 132012 132013 TTCGCAAAAGAACGA TTTTAGCGAAATTG ATG CAATTTCACCAAAA GGAAGTGCACTGAAT TERM 100 132195 - 132215 + G 75 -5.5 -4.83169 | opp_overlap 132186, overlap 132196 ACTTAAGAAATTGCT TTCTCAGAA TGT TTTTGAGAG TTTTTGTGCGGCCAT BQ00970 131812 - 132504 + | hypothetical protein hslO 135083 - 134082 - | Hsp33-like chaperonin TERM 101 135943 - 135957 + r 70 -4.2 -4.68593 | AGGTTTTGAACTTTT TCCTGC TTT GAAGGA TTTTTGCATAGTCGA argD 137254 - 136061 - | bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein BQ01020 137737 - 138270 + | hypothetical protein TERM 102 138969 - 138984 + T 74 -3.2 -5.38249 | CATCGCTTCTTTTTA TGATGC GCGA GCAACA TTTTTTATGATTCAT dsbE 139693 - 139052 - | Thiol 3A-disulfide interchange protein BQ01050 139919 - 139668 - | hypothetical protein ccmC 140686 - 139907 - | Heme exporter protein C TERM 103 140193 - 140209 + g 86 -4.4 -5.50774 | ACCAGTGTGAGAATT GCTGTA GCGCG TGCAGC TTTTTCTTTGTTATC ccmB 141397 - 140732 - | Heme exporter protein B TERM 104 141235 - 141214 - G 77 -10.2 -3.2794 | GTTTATTCAGATTAA GGAGTCCT GCGAGA AGGACTCC AAACCATAATATGCC ccmA 142020 - 141394 - | cytochrome c biogenesis protein CcmA TERM 105 143385 - 143399 + G 75 -5.7 -4.79223 | opp_overlap 143385 TGTGGCATGATGAAA TGGGA GCCGA TCCCA TTTTTAGTGATATAA TERM 106 144758 - 144768 + G 75 -5.4 -4.78848 | AATCTTGTTGGTATG GGAA TTG TTCC TTTTGTGTTTGAAGC TERM 107 144895 - 144916 + G 71 -7.3 -3.92001 | opp_overlap 144900, overlap 144892 GATTACTTTTTCTGA TGGAACGGT AAAA ACCATTCCA TTATTATGTCGTGTC acnA 142319 - 145006 + | aconitate hydratase rpsT 145233 - 145499 + | 30S ribosomal protein S20 TERM 108 145550 - 145525 - f 87 -13.3 -2.74605 | opp_overlap 145526, overlap 145522 145521 TTTTTTTAAAATTTA GGCCAGCACCT CTAC AGGTGCTGGCT TTTTTGCTTTCTTTT TERM 109 145526 - 145549 + F 100 -16.8 -5.48163 | opp_overlap 145525 145522 145521 TTTTTTAAAATTTAG GCCAGCACCT CTAC AGGTGCTGGC TTTTTTGCTTTCTTT TERM 110 145636 - 145652 + F 80 -7.3 -4.59511 | opp_overlap 145628 GAAATTATATGGTTA TCCACAG TCT TTGTGGA TTTTTGCAGAGTCTT TERM 111 146167 - 146177 + F 70 -4 -4.84359 | AGCTGTTTGGCGAGA CAAA GTT TTTG TTTTTATCGGGATGA TERM 112 147018 - 146994 - g 70 -9.4 -2.57931 | opp_overlap 146994, overlap 146993 GCTATTCGTGATAAT GCTGCTCTTT CTTTT AAAGAACAGC TTCGTGATATTGATC TERM 113 147508 - 147495 - g 75 -9.5 -3.38162 | opp_overlap 147493 ATTGAAGAAATTCAA CGCGC AGTT GCGCG CCATTATAATGTTTC dnaA 146196 - 147767 + | chromosomal replication initiation protein dnaN 147961 - 149082 + | DNA polymerase III subunit beta recF 149103 - 150236 + | recombination protein F TERM 114 150496 - 150518 + G 80 -11.4 -2.83271 | overlap 150494 GCGATTGGCGTGAGT GCGGGATTAA TCA TTAATCCTGC TGCTTATAGCCATAC aroQ 150289 - 150735 + | 3-dehydroquinate dehydratase TERM 115 151208 - 151220 + G 70 -7.7 -3.71848 | opp_overlap 151199 151204 151205 151208 GAACCAGGAAATCCA CTTCC GGT GGAAG TTGTTGGTGAAGAGA cyoA 150857 - 151828 + | cytochrome o ubiquinol oxidase subunit II TERM 116 153230 - 153246 + G 79 -5.9 -4.93365 | overlap 153231 153240 TTTAGCTGGGCTTGC TTTTTGG TTT CCAAAAG TTTTTGGTTATAAAC cyoB 151902 - 153920 + | cytochrome o ubiquinol oxidase subunit I cyoC 153917 - 154582 + | cytochrome o ubiquinol oxidase subunit III TERM 117 154830 - 154843 + G 86 -4.5 -5.3798 | overlap 154831 AAGTGCCCTGTGGTT TGCAG CTAT CTGCG TTTTTGTTATTATTG cyoD 154582 - 155088 + | cytochrome o ubiquinol oxidase subunit IV TERM 118 155507 - 155495 - f 75 -4.9 -4.96773 | CCAATTAAAAACAAA GATTT GAA AAATC ATTAGGAAACTTCAT TERM 119 156076 - 156060 - g 82 -6.5 -4.8667 | opp_overlap 156060 156062, overlap 156062 TAGAGTTTATAAAAA CCCCGAT ATG ATCGGTG TTCAGTTAGGTGGAG gpsA 155521 - 156543 + | NAD(P)H-dependent glycerol-3-phosphate dehydrogenase TERM 120 156793 - 156772 - T 76 -4.5 -5.07011 | opp_overlap 156772 156776, overlap 156774 CAGAGAAAGTAAAAA TATACCATT CTAA AATGGTATG TAAATTGCTTTTTCT TERM 121 156791 - 156774 - T 75 -7.1 -4.13882 | opp_overlap 156772 156776, overlap 156772 GAGAAAGTAAAAATA TACCATT CTAA AATGGTA TGTAAATTGCTTTTT fabI1 157649 - 156831 - | enoyl-(acyl carrier protein) reductase TERM 122 157079 - 157065 - G 75 -10 -3.06183 | GCCATTGCCAGCTAA GGTCCT AAT AGGACC AGCTGAGATTGCATT fabB 158918 - 157698 - | 3-oxoacyl-(acyl carrier protein) synthase I TERM 123 158038 - 158050 + g 77 -4.9 -4.89477 | GCTGTTGCATGCGGG TTGAT ATA ATCAA TTTTATTCTTCACGG fabA 159485 - 158976 - | 3-hydroxydecanoyl-(acyl carrier protein) dehydratase fur1 159717 - 160217 + | Iron response regulator BQ01240 160834 - 160277 - | hypothetical protein TERM 124 160764 - 160752 - G 70 -3.4 -5.00616 | TGTGCGTGCAAAAAA TCAG ATGAA CTGA AGGTAAAGACTCCTG rpsU 161832 - 161599 - | 30S ribosomal protein S21 TERM 125 165532 - 165542 + G 73 -5.4 -4.51699 | GTATGTCTTTTTCTG TTGC GTT GCAA TTTTCTGGTGATTCT BQ01280 164682 - 165797 + | hypothetical protein TERM 126 165868 - 165882 + G 71 -6.4 -4.20367 | opp_overlap 165868 GCACAGGTGGAGCAA GGTGGT ATA ATCACC TTATTTATTCGCAGG TERM 127 167527 - 167541 + G 70 -3.6 -5.00339 | TTGACGCCTGCAGAA GATAGA GCC TTTATC TTTTTGGTTATTAAT acrD 165820 - 168945 + | acriflavin resistance protein d TERM 128 168951 - 168937 - f 79 -8.6 -3.83318 | opp_overlap 168934 168937 CGCTTAATAAGAGAA TTCAGC TAA GCTGAA TGATTTATCTGGTAG TERM 129 168937 - 168951 + F 71 -8.6 -3.07876 | opp_overlap 168937, overlap 168934 CGCTTAATAAGAGAA TTCAGC TAA GCTGAA TGATTTATCTGGTAG TERM 130 169926 - 169940 + G 71 -7.2 -3.93061 | opp_overlap 169928 GCAGAATTTGGCATA GATTCT TCA AGAATC TTTAAATTTTGGGAT TERM 131 170356 - 170366 + G 79 -5.4 -5.00611 | opp_overlap 170343 AAGGAACAGATGTTA TTCC TGT GGAA TTTATTTTATTTATA TERM 132 170762 - 170751 - g 75 -5.8 -4.77173 | CGTGGAGAAAACAAA GCGA ATAA TCGC GATAGCTCCACATTA pgi 169137 - 170816 + | glucose-6-phosphate isomerase rplU 171226 - 171717 + | 50S ribosomal protein L21 rpmA 171730 - 171999 + | 50S ribosomal protein L27 TERM 133 172061 - 172082 + F 95 -5.2 -6.19443 | opp_overlap 172061 TTTAGCACTAGAAAG GAAAGGCA AGATGG TGTCTTTC TTTTTTTTTACTCTA TERM 134 172669 - 172653 - f 73 -3.7 -5.13722 | GTTATGAAAATAAAA TCTGTCA GCA TGAGAGA AAAGATTGATTTAAG TERM 135 174344 - 174355 + G 70 -5.8 -4.36914 | opp_overlap 174344 CATTTCCATAACGGA CCAG CCAA CTGG TTTTGTAGCGGGCAC TERM 136 174615 - 174634 + G 73 -7.2 -4.00469 | GTAGATAATCCTTTA TTAGCAGC ACGT GCTGTTAA TTTAGTTGATGTTGG fruB 173436 - 175949 + | multiphosphoryl transfer protein (mtp) TERM 137 176782 - 176795 + T 79 -4.5 -5.38398 | ATTGATGGTTTTATC TACCC TCTT GGGTG TTTTTATCTTTTTAT TERM 138 177312 - 177326 + T 75 -8.6 -3.50302 | overlap 177308 ACATCGACGTTTTAT TAGCCA TTA TGGCTA TTGGTCTTGTTATTC BQ01360 178216 - 177995 - | hypothetical protein TERM 139 178718 - 178692 - H 72 -9.5 -2.60199 | opp_overlap 178698, overlap 178682 178689 178687 178698 TGTAATTAAACACAT GGGAAATGCGT TTAAC ACGCATTTCCT TGCAATGGGGGTTAA TERM 140 180385 - 180401 + G 72 -4.3 -4.67038 | opp_overlap 180385 GAAGCGACGGGAAAG GCTGGTG GCG CGCAAGC TTTTAGTTTTGGCGA badA1 179860 - 183057 + | adhesin TERM 141 183087 - 183123 + F 86 -11.1 -3.16534 | gap 2, opp_overlap 183086 183084, overlap 183088 ATATTGTAGTAAGAT TCCGTTCACCTCTGCCT AAATA AGGCAGAGGTGA--GGA GTTTTGATAGAATTA TERM 142 183088 - 183124 + F 100 -11.6 -4.28361 | opp_overlap 183086 183084, overlap 183087 TATTGTAGTAAGATT CCGTTCACCTCTGCCT AAATA AGGCAGAGGTGAGGAG TTTTGATAGAATTAA TERM 143 183342 - 183328 - f 85 -8.6 -4.10552 | opp_overlap 183326 183328 TCTCACTAAAGTAAA GTCTGT GCA ACAGAC TATTTCCGTTTGCGG TERM 144 183328 - 183342 + F 75 -8.6 -3.50832 | opp_overlap 183328, overlap 183326 TCTCACTAAAGTAAA GTCTGT GCA ACAGAC TATTTCCGTTTGCGG badA2 183418 - 186267 + | adhesin TERM 145 186297 - 186333 + F 86 -11.1 -3.16534 | gap 2, opp_overlap 186296 186294, overlap 186298 ATATTGTAGTAAGAT TCCGTTCACCTCTGCCT AAATA AGGCAGAGGTGA--GGA GTTTTGATAGAATTA TERM 146 186298 - 186334 + F 100 -11.6 -4.28361 | opp_overlap 186296 186294, overlap 186297 TATTGTAGTAAGATT CCGTTCACCTCTGCCT AAATA AGGCAGAGGTGAGGAG TTTTGATAGAATTAA TERM 147 186538 - 186552 + F 75 -8.6 -3.50832 | opp_overlap 186538, overlap 186536 TCTCACTAAAGTAAA GTCTGT GCA ACAGAC TATTTCCGTTTGCGG TERM 148 186552 - 186538 - f 85 -8.6 -4.10552 | opp_overlap 186538 186536 TCTCACTAAAGTAAA GTCTGT GCA ACAGAC TATTTCCGTTTGCGG TERM 149 187284 - 187300 + G 75 -7.9 -4.07868 | opp_overlap 187268 TGGTTCCGGTTACGG CAGCAGC TTC GCAGCTG TTTCTGTGGGTGTCA badA3 186628 - 189540 + | adhesin BQ01420 189537 - 190109 + | hypothetical protein BQ01430 191211 - 190705 - | hypothetical protein TERM 150 191324 - 191309 - H 71 -3.3 -5.03314 | opp_overlap 191309 TTTATCGGTAAAAAA TCACT GAGAAT AGTGA GTTTAAAACTGAATA TERM 151 191832 - 191801 - H 79 -3.8 -5.56673 | AGGGATAAGAAAAAA TGACTCTGTTAGAT TATG ATTCAAAAGAGTCA AAGCAAGGAAGACTG TERM 152 192073 - 192052 - H 82 -3.1 -5.75538 | opp_overlap 192052 TTGAAAAAACAAAAA GTCAAAAAA CACC TTTTTTCAC GGTTTTCTCAATTAA TERM 153 193167 - 193156 - g 90 -3.6 -5.88061 | AAAAAACGAAAAAAA CACC GACT GGCG GATACGGGGGCTCAG TERM 154 193383 - 193373 - g 70 -5.4 -4.33739 | opp_overlap 193365 CAAAAAAGGTCAAAA GATC ATT GATC TGGGAGCAGCGCCGG TERM 155 193676 - 193696 + G 70 -2.5 -5.14563 | overlap 193693 TGATTTTGCTCTTTC TGTTCTCAA GTC TGGAGGGCA TTTTTTAGTAAAGGC ftsJ 193137 - 193862 + | cell division protein ftsJ obgE 194031 - 195056 + | GTPase ObgE proB 195040 - 196194 + | gamma-glutamyl kinase proA 196262 - 197500 + | gamma-glutamyl phosphate reductase TERM 156 197827 - 197840 + G 76 -3.1 -5.3236 | gap 1, overlap 197822 197823 CATATTCTTACGCAC TGC-CC CGG GGTGCA TTTTTTGTGGGTTAT nadD 197530 - 198123 + | nicotinic acid mononucleotide adenylyltransferase TERM 157 198142 - 198160 + F 71 -7.5 -3.69405 | TTTTATAAGATTCTG CTTCTCT TTGTT AGAGAAG TTCCTCTTTTTTCTA filA 199204 - 200484 + | filament-A percursor ctpA 200474 - 201799 + | carboxy-terminal processing protease ctpA invA 201841 - 202362 + | dinucleoside polyphosphate hydrolase invB 202474 - 203034 + | invasion-associated protein B TERM 158 203067 - 203051 - f 100 -7.9 -5.93252 | opp_overlap 203052, overlap 203052 CTTAAAAATAAAAAA GCGGCCT TTA AGGCCGT TTTTAATTTGAGCGT TERM 159 203052 - 203066 + F 100 -11.4 -4.98531 | opp_overlap 203052 203051 TTAAAAATAAAAAAG CGGCCT TTA AGGCCG TTTTTAATTTGAGCG TERM 160 203066 - 203052 - f 100 -11.4 -4.13511 | opp_overlap 203052, overlap 203051 TTAAAAATAAAAAAG CGGCCT TTA AGGCCG TTTTTAATTTGAGCG BQ01560 203370 - 203663 + | hypothetical protein BQ01570 203688 - 204032 + | hypothetical protein TERM 161 204028 - 204010 - T 81 -7.4 -4.38116 | opp_overlap 204010 CGCACAAAAATGAAA GCCTGCTC AAA AAACAGGC TTGATTTTTCTGAAA ppa 204577 - 204047 - | inorganic pyrophosphatase typA 206472 - 204646 - | GTP-binding protein typA TERM 162 205897 - 205867 - G 88 -11.2 -3.62096 | TCCGATCATGCGAAA TGGCCCTTCTGCTA CAG TAGGAGAAGGGACA TGGCGCGTTACAAGA TERM 163 205932 - 205922 - G 79 -6.8 -4.57787 | opp_overlap 205922 ACAAGATCAAACAAA GGAC TTA GTCC TTGATCTTTAGGTCC TERM 164 207686 - 207698 + r 79 -4.1 -5.32944 | overlap 207687 GAAGAGATTTTAAAT TGCAT GAA ATGCG TTTTTTGCTTCTCCG mgtE 209092 - 207716 - | Mg2+ transport protein TERM 165 208024 - 208005 - G 70 -2.8 -5.14965 | ATTCCGAGTAAAAAA CCAAGAGA CAGC CCTGTTGG AATTTCACGGATGAT TERM 166 209491 - 209504 + r 85 -6.7 -5.30616 | GACTAGAAGGGATTT TCAGG GCTT CCTGA TTTTTCTTTAAATAA TERM 167 211483 - 211504 + r 89 -9.5 -4.20211 | opp_overlap 211480 211483 TGTAAAGTATAACGA CGGTATAGT GCGC GCTATACCG TTTATCGTTTATATT BQ01620 212701 - 211634 - | hypothetical protein TERM 168 212462 - 212482 + g 81 -2.5 -5.61824 | opp_overlap 212464 212468, overlap 212464 AAAGTCTCCTATAAC AAGAATGCG CTT TGCGTTCTC TTTTTTTGGCTTTTG TERM 169 212515 - 212530 + g 70 -5.4 -4.42491 | opp_overlap 212515, overlap 212507 TGGTTTTTTGTAATA CAATCC TTTT GGGTTG TTTGTGTATTTTTTG BQ01630 213969 - 212713 - | peptidoglycan-binding protein TERM 170 213155 - 213166 + g 70 -3 -5.09225 | overlap 213156 TCAAAGGAATGCCAA TCTT TAGG AAGA TTTTTTCCCTGAGGT TERM 171 214836 - 214826 - g 70 -3.2 -4.93177 | GAAAAACCAACAAAA GGAA CAG CTCC ATCGAATTTGTACAT galU 214238 - 215128 + | UTP-glucose-1-phosphate uridylyltransferase TERM 172 215405 - 215418 + G 80 -2.3 -5.60993 | overlap 215406 GCAACCTTAGCTTCA ACAGG GACA CCTGC TTTTTTTGTACACGC TERM 173 215872 - 215889 + G 71 -4.9 -4.56314 | opp_overlap 215872 GACTGAAGCTATGAA TGTTTTG GTTG CGAAACA TTTTGGTTGTGTTGG TERM 174 216050 - 216060 + G 81 -6.8 -4.73613 | AATACACTGGTTGGT GCTG CGA CAGC TTTTATTAATGATCA BQ01650 215168 - 216163 + | polysialic acid capsule expression protein TERM 175 216187 - 216173 - T 88 -7.2 -5.0538 | GCTTAGGTTAAAAAA TATCTG TTT CAGATA AAAGTTTGTTTTGGG BQ01660 216809 - 216450 - | Outer membrane lipoprotein precursor TERM 176 217031 - 217058 + H 79 -9.4 -3.50853 | opp_overlap 217039, overlap 217039 TCTTATATTAAGCTG TTTAGTAATCTC AGAG GAGATTATTAAA TTATGGTTGGGCCGA TERM 177 217696 - 217724 + G 85 -8.9 -4.2528 | opp_overlap 217695 AGAAGAAGAAAATCG CCAGTGGTTTAAA GAA TTTTTACCACTGG TTTCTTCCCTTGAAA BQ01670 217061 - 218446 + | sigma 54 activator-like protein BQ01680 218881 - 220452 + | phopholipase D-family protein TERM 178 220466 - 220479 + F 86 -2.5 -5.77734 | opp_overlap 220466 220470, overlap 220470 AGATTTTATAAACCA TAATT AAAA AATTA TTTTTATTTTTCTTT TERM 179 220470 - 220485 + F 77 -3.4 -5.56372 | opp_overlap 220466 220470, overlap 220466 TTTATAAACCATAAT TAAAAA ATTA TTTTTA TTTTTCTTTTCATTT guaB 220604 - 222103 + | inositol-5-monophosphate dehydrogenase TERM 180 222240 - 222204 - f 79 -8.2 -4.06562 | opp_overlap 222205 222210, overlap 222205 AATCTCAAGCATAAA GGGAAAGAATTGGA AGCTAACGA TCCAATTCTTTCCT TAGGTTATATAAAAT TERM 181 222239 - 222205 - f 84 -11.7 -3.03214 | opp_overlap 222205 222210, overlap 222204 ATCTCAAGCATAAAG GGAAAGAATTGGA AGCTAACGA TCCAATTCTTTCC TTAGGTTATATAAAA TERM 182 222205 - 222239 + F 87 -11.7 -3.26449 | opp_overlap 222204 222205, overlap 222210 ATCTCAAGCATAAAG GGAAAGAATTGGA AGCTAACGA TCCAATTCTTTCC TTAGGTTATATAAAA TERM 183 222773 - 222762 - f 70 -4.4 -4.7219 | TAGAGGAACAGAAAA TGCA AATG TGCA GCATAGTGATGAAGA TERM 184 224024 - 224039 + G 74 -4 -5.06414 | TTTTTTGGTGAAAAT GAGGAA CAAA TTTCTC TTTTTCTTAAACAGC sun1 222926 - 224212 + | SUN protein (Fmu protein) guaA 224344 - 225900 + | bifunctional GMP synthase/glutamine amidotransferase protein BQ01720 226035 - 226799 + | hypothetical protein ugpC 227961 - 226915 - | glycerol-3-phosphate transporter ATP-binding subunit TERM 185 227262 - 227240 - G 83 -7.1 -4.71426 | TTGCGATCAAGAAAA TTCATAGGG GGAGA CCCTATAAA ATCAGCAACAAATGT ugpE 228815 - 227964 - | sn-glycerol-3-phosphate transport system permease protein ugpE ugpA 229710 - 228826 - | sn-glycerol-3-phosphate transport system permease protein ugpA TERM 186 229772 - 229789 + r 83 -6.3 -4.93696 | opp_overlap 229772, overlap 229766 AAAGAATTGAAAAAA CTCAACT GTTT GGTTGAG TTTTTGATCTTTAAC TERM 187 229789 - 229772 - R 82 -5.6 -5.23016 | opp_overlap 229772 229766 AAAGAATTGAAAAAA CTCAAC TGTTTG GTTGAG TTTTTGATCTTTAAC ugpB 231146 - 229821 - | glycerol-3-phosphate-binding periplasmic protein precursor ugpB BQ01770 232451 - 231525 - | ABC transporter, periplasmic binding protein TERM 188 232505 - 232485 - R 74 -6.7 -4.42653 | overlap 232487 AGGGGACGTATAAAA GAGGCAAGG AAA CCGTGCCGC AATAAAACCGCGCGG BQ01780 233333 - 232461 - | ABC transporter, permease protein TERM 189 232503 - 232487 - G 73 -7.9 -3.82117 | overlap 232485 GGGACGTATAAAAGA GGCAAGG AAA CCGTGCC GCAATAAAACCGCGC TERM 190 232575 - 232551 - G 74 -5 -4.72277 | gap 1 AAGAAGATAAATAAA CCCTGC-AGCA ATAA TGATAGCAGGG CCGGAGGGAAGTGAC BQ01790 234089 - 233337 - | ABC transporter, ATP-binding protein TERM 191 233457 - 233475 + g 70 -2.5 -5.01553 | overlap 233458 ATTGAAAAATTGTGT TGTTTTT CCATA AAAAACG TTTTGTTTATCAATT TERM 192 234730 - 234748 + H 83 -2.4 -5.81032 | overlap 234734 TGGAAGTTGTCAGAA TTAGCTCT TTT AGGGTTGA TTTTTTTTCGAATTG nrdH 234779 - 235003 + | glutaredoxin-like protein nrdH nrdI 235003 - 235401 + | ribonucleotide reductase stimulatory protein nrdE 235383 - 237533 + | ribonucleotide-diphosphate reductase subunit alpha nrdF 237545 - 238519 + | ribonucleotide-diphosphate reductase subunit beta hemK 239382 - 238516 - | protoporphyrinogen oxidase protein TERM 193 238603 - 238617 + g 70 -2.8 -5.07486 | opp_overlap 238603 GCCATTTTTTTCAAA TAAGTC GCA GACTTC TTTTTCTTGAGAGTG TERM 194 238640 - 238661 + g 74 -5.1 -4.72386 | overlap 238641 238645 238647 TGAGAGTGGCCGATT TCAACGGCT AAAG AGCCTTTGG TTTTTAAGTAGTTTG TERM 195 238645 - 238656 + g 70 -5.8 -4.33653 | overlap 238641 238640 238647 GTGGCCGATTTCAAC GGCT AAAG AGCC TTTGGTTTTTAAGTA TERM 196 238761 - 238771 + g 79 -5.4 -4.87037 | CATGTAGACGCACTT CCTT TGC AAGG TTTTTGATATCTGTT TERM 197 238885 - 238897 + g 83 -4.8 -5.30686 | overlap 238895 ACGGTGTATGACCTT CGCA TTTTT TGCG TTTTTTATCGCTGTT prfA 240458 - 239379 - | peptide chain release factor 1 TERM 198 240369 - 240381 + g 73 -5.5 -4.64657 | overlap 240370 240380 CAATTTTACATAAGT TCCAG AAT CTGGG TTTTTAGCCATTTGG TERM 199 240473 - 240488 + r 82 -3.4 -5.68489 | TGACAATATTGGCCT TATTAT TGTT ATAATA TTTTTTATTGTTATA fur2 241074 - 240658 - | Iron response regulator secA 243812 - 241092 - | preprotein translocase subunit SecA TERM 200 242971 - 242989 + g 73 -2.3 -5.32608 | opp_overlap 242971 CTTTTCCCTTTAAGA TGCCCGG CCTGT TCGAGCA TTTTTTCAATTTTTT TERM 201 243804 - 243783 - G 73 -2.3 -5.27477 | AGCTGAACCAAAAAA TTTACGTGC AAAT ACACCTAAA CCGACCATCTCTGGC TERM 202 244483 - 244493 + G 71 -6.8 -4.08767 | opp_overlap 244482, overlap 244492 TCCTGATGAACAACG CCGT ATA ACGG TTTTAAAAGCCTACC BQ01880 244232 - 245185 + | peptidyl-prolyl cis-trans isomerase TERM 203 245617 - 245591 - g 77 -8.1 -4.17878 | gap 1 GCAAAGGAAAGCAAA CAGCAG-ATGCA ATAT TGCATGCTGCCG CGAGTGCTTTGAAGG TERM 204 246054 - 246042 - g 77 -7.7 -4.25388 | opp_overlap 246042 GACAGGAAAAGTAAA GGGAA ATT TTCCC TGCTTCACGAGTAAA TERM 205 246265 - 246254 - g 81 -7.2 -4.60487 | CACCACTTGTAAAAA CGGC CATT GCCG GTGAAGATGCTAATT argJ 245302 - 246540 + | bifunctional ornithine acetyltransferase/N-acetylglutamate synthase protein mutT 246681 - 247094 + | Mutator mutT protein BQ01910 248467 - 247604 - | hypothetical protein pepA 249992 - 248625 - | leucyl aminopeptidase TERM 206 249701 - 249714 + g 70 -8.1 -3.65351 | AGGTATTGATTTCAT GGGAG GCTG CTCCC TTTAAATGCCACTGA coaA 251004 - 250006 - | pantothenate kinase ansA 252115 - 251126 - | L-asparaginase TERM 207 252175 - 252191 + H 91 -5.1 -5.7946 | opp_overlap 252165 AGCAACAATTTGCAT TGACAAC AAT GATGTCA TTTTTTTATTCCAAC TERM 208 252459 - 252435 - g 73 -7.8 -3.81287 | opp_overlap 252435 CAGACGATTATGAAA GGCAATGCAC GCAAA GTGCGTCGCC TTGGTAAGAGTGGGA hslV 252318 - 252899 + | ATP-dependent protease peptidase subunit hslU 252900 - 254210 + | ATP-dependent protease ATP-binding subunit rsmC 255258 - 254230 - | ribosomal RNA small subunit methyltransferase c TERM 209 255270 - 255248 - G 87 -6.2 -5.27335 | opp_overlap 255248 TCCTTCAAAGAAAAA TGCCATTCCA ATT TGGGCTGGCA TTTCATTTCATAGTA TERM 210 255248 - 255270 + g 79 -8.4 -4.11623 | opp_overlap 255248 TCCTTCAAAGAAAAA TGCCATTCCA ATT TGGGCTGGCA TTTCATTTCATAGTA TERM 211 255292 - 255305 + r 77 -3.1 -5.4505 | TTCATAGTAAGAAGG GGAGA TTAT TCTTC TTTTTTCTTACGAAG pnp 257498 - 255297 - | polynucleotide phosphorylase/polyadenylase TERM 212 255346 - 255357 + g 78 -3 -5.3658 | TCAGGGTTATTTTTT GTAT CAGC ATAC TTTTCTTTTTCTGCT TERM 213 255497 - 255508 + g 74 -4.4 -4.84017 | TATCGCCTTCTTTAA CAAC ATTT GTTG TTTTTGTGACACGTT TERM 214 257752 - 257725 - R 84 -6.4 -5.10029 | gap 1, opp_overlap 257725 257724 257722 AGCAAGCTGAAAAAA TGGGTGG-ATTTT TGT AGAATACCACCCA CTCATTTTTCTTTTA rpsO 258034 - 257765 - | 30S ribosomal protein S15 TERM 215 258139 - 258108 - H 91 -11.8 -3.737 | gap 1, opp_overlap 258103 258117, overlap 258111 258117 CAAGGGTCTACGAAA GAACAAG-AAGAGTC AAA GACTCTTACTTGCTC TGGCATTATATACAG TERM 216 258136 - 258111 - H 87 -9.9 -4.00042 | gap 1, opp_overlap 258103 258117, overlap 258108 258117 GGGTCTACGAAAGAA CAAG-AAGAGTC AAA GACTCTTACTTG CTCTGGCATTATATA TERM 217 258129 - 258117 - H 78 -7.7 -4.16937 | opp_overlap 258117 258103, overlap 258111 258108 ACGAAAGAACAAGAA GAGTC AAA GACTC TTACTTGCTCTGGCA TERM 218 258862 - 258872 + G 76 -2.4 -5.4833 | ATTGCTACTCTGGGT GCAG CCA CAGC TTTTTTGTTCAATGC TERM 219 258966 - 258948 - g 71 -5.2 -4.5448 | opp_overlap 258948, overlap 258949 GAGCCATAAAAATAA CCTCTTGC CAC GCGAGAGA CTTTTAGGGGCTGTC TERM 220 259072 - 259087 + G 71 -7.6 -3.92996 | GGGGCGATTTCGATT TTGGCA CTCT TGCCAA TTGTTGTGTATAAAA BQ02000 258352 - 259980 + | transport transmembrane protein TERM 221 259992 - 260025 + T 73 -4 -5.06816 | opp_overlap 259999 TTGATGGTAAGAGTT GAGTATAGAATGAG AAGGGC TTCATTCTTTATTC TTTTTATTGAGAGAT truB 261027 - 260215 - | tRNA pseudouridine synthase B rbfA 261439 - 261032 - | ribosome-binding factor A infB 264100 - 261563 - | translation initiation factor IF-2 TERM 222 262052 - 262036 - G 77 -8.1 -4.1891 | overlap 262032 CTTCCGCAAGAGAAA TATCACT TTC AGTGATA CCTCCAGCACCAGAA TERM 223 262725 - 262777 + g 100 -15.2 -4.24294 | gap 1, overlap 262722 ACTTTTTGCGCATCA GCAGCTGGTTTATCGATT-TTGTTG ATGG CAACAATAATGGGTACACCAGCTGC TTTTGCATGATTAAT BQ02040 264730 - 264131 - | hypothetical protein TERM 224 264464 - 264478 + g 73 -7.1 -4.07687 | opp_overlap 264442 264463 264436 264464 264474 264477, overlap 264442 TCGCGCCATGGAAAG GCTGC CAAGA GCAGC TTTTAGCAAAAGCAT nusA 266362 - 264731 - | transcription elongation factor NusA TERM 225 265798 - 265768 - G 76 -3.1 -5.27335 | opp_overlap 265770, overlap 265769 265770 TGCGTGAAAGAAAAA TTTGCGGACCGCG TGGTT CGCGGTGCACATC ACTAACAAAGGCACG TERM 226 265796 - 265770 - G 73 -10.1 -2.84684 | opp_overlap 265770, overlap 265769 265768 CGTGAAAGAAAAATT TGCGGACCGCG TGGTT CGCGGTGCACA TCACTAACAAAGGCA BQ02060 267062 - 266412 - | hypothetical protein TERM 227 266728 - 266716 - G 81 -2.7 -5.63103 | TGCCAATGAAAAAAA TCAGA TTT TCTAA CCAATGGGCGATCAA TERM 228 267103 - 267085 - R 93 -4.5 -6.0427 | gap 1 ATGATATAAAAAAAA GCGGGTCC AGAC GG-CCCAC TCCTCATCATAAGAC trmB 267891 - 267190 - | tRNA (guanine-N(7))-methyltransferase metK 269156 - 267888 - | S-adenosylmethionine synthetase TERM 229 268297 - 268273 - G 79 -6.9 -4.56597 | TCCTTGCCTGAAAAA GCGCCTCCACC ATG GGGGGCTGCGC CTCCATAAGTGTCAA TERM 230 268523 - 268533 + g 70 -3.2 -4.87273 | TGGATGTTACCTCTA TGGG CTT TCCA TTTTTATACCGTATT BQ02090 269685 - 269272 - | transcriptional regulator lnt 271466 - 269832 - | apolipoprotein N-acyltransferase TERM 231 271377 - 271355 - GR 71 -8.5 -2.97386 | overlap 271359 271364 AAAACGCACCACACA GAAACAGCA CTGCT TGCCGTTTC CAACCAGTAACGGAA tlyC 272448 - 271429 - | hemolysin TERM 232 272203 - 272191 - GR 72 -9.1 -2.5511 | opp_overlap 272186 272185, overlap 272190 CATGACATCATCAAC GCGTG CTT CACGC AAGCGTAGAATATTA BQ02120 273022 - 272546 - | hypothetical protein TERM 233 272694 - 272704 + g 73 -5.4 -4.65969 | overlap 272698 272698 272699 ATATGCGTTAAATGG TCCT GAA AGGA TTTTCCTTCTTTCTT phoH 274144 - 273035 - | phosphate starvation-induced protein phoH TERM 234 274130 - 274146 + g 73 -9.5 -3.24633 | overlap 274128 GCACTTTATTTTTTC GGTTGAA GCT TTCAACC TATTCTCCCATATCT BQ02140 275598 - 274222 - | hypothetical protein TERM 235 275536 - 275551 + g 77 -6.2 -4.56597 | opp_overlap 275536 CATTTGACAACCATA GGTTTT AATA AAAACC TTTTTAGGAACAACA BQ02150 276121 - 275630 - | peptide N-acetyltransferase BQ02160 276804 - 276121 - | hypothetical protein TERM 236 276472 - 276484 + g 75 -2.7 -5.1963 | AATGACAACGCTGAT TGCTA GTG TAGTA TTTTTATTGGTTGCA TERM 237 276954 - 276966 + r 72 -4.9 -4.69664 | TATTATGGGCGGTCG CATAT TCA ATATG TTTTTGCGTGGTATG TERM 238 277688 - 277676 - R 73 -9.1 -2.86785 | overlap 277675 TATGACAGGAATAAG TCCGC TGA GCGGA TAAGCATCATGATAG recR 279143 - 278538 - | recombination protein RecR TERM 239 279067 - 279047 - G 71 -7.5 -3.80625 | TTTTGATAAGGTAAA GTGCAGCAC GAC GCGCTGAAC GCGGACCAAAACCTG BQ02190 279504 - 279178 - | hypothetical protein dnaX 281441 - 279519 - | DNA polymerase III subunits gamma and tau TERM 240 281942 - 281957 + r 73 -7.6 -3.87318 | opp_overlap 281942 TTGAACTGGTATAAA CAAAGC ATTC GCTTTG TTTGATATAATAATT TERM 241 281957 - 281942 - R 73 -7.6 -3.89614 | opp_overlap 281942 TTGAACTGGTATAAA CAAAGC ATTC GCTTTG TTTGATATAATAATT TERM 242 282160 - 282174 + r 75 -8.6 -3.48063 | overlap 282158 GTTGCTGAATAGCGC GATGTG ATT CACATC TTATCGCTTTAAATG BQ02210 283151 - 282744 - | hypothetical protein TERM 243 283991 - 284005 + r 86 -2.8 -5.86965 | overlap 283992 GGTGCTAGAGCTGCT TGTGAA CGT TTCGCG TTTTTTTTAATAAAT kdsB 285169 - 284438 - | 3-deoxy-manno-octulosonate cytidylyltransferase TERM 244 284797 - 284807 + g 72 -3.2 -5.00884 | CCAAAGTTGCAATAT CAGT TAA GCTG TTTTTTAAAGGGCGT BQ02240 285276 - 285815 + | hypothetical protein TERM 245 288232 - 288248 + T 85 -9.5 -3.91897 | opp_overlap 288230, overlap 288223 TATTTTGCAATTATT GCCTTTT TTG AAAAGGC TTTATCAATCAGGCG TERM 246 289457 - 289467 + T 77 -5.4 -4.8384 | ATCTTCTCAGGCACA GATC ATT GATC TTTTTACATTATTTA moeB 290399 - 289611 - | molybdopterin biosynthesis protein MoeB gshB 290488 - 291426 + | glutathione synthetase BQ02300 291576 - 292622 + | periplasmic phosphate binding protein TERM 247 293593 - 293605 + G 87 -3.4 -5.72207 | overlap 293582 TTGCTGGTATTCCAA CCAT TGTTT ATGG TTTTTTTGCTTTGAA TERM 248 293718 - 293734 + G 71 -3.7 -4.96388 | GCTGGATGTGTGATG GGGATTA TGT TGATTCC TTTTGTTTCCTCCTT BQ02310 292683 - 294143 + | ABC transporter permease protein TERM 249 294575 - 294597 + G 80 -10.6 -3.28791 | opp_overlap 294570 294569 AAAATCAAAGTCTTA GCAGCAGCAA ATA TTGATGCTGC TTATAAAGGACAGAT pstA 294140 - 295432 + | phosphate ABC transporter permease pstB 295491 - 296249 + | phosphate ABC transporter ATP-binding protein TERM 250 296495 - 296472 - g 80 -6 -4.76644 | opp_overlap 296494 AACATTGATGAAAAA GCGATTACAA TTAT TTGCAAGCGC CAACCGATGGCTGTT phoU 296271 - 296993 + | phosphate transporter PhoU TERM 251 297286 - 297314 + F 93 -14.1 -2.63823 | opp_overlap 297286, overlap 297283 297282 TATTGATGCAGACAA TTTTAGTGCCGAA TTT TTCGGTACTAAAA TGAATTGTATGGCTT TERM 252 297314 - 297286 - f 91 -11.9 -3.524 | opp_overlap 297283 297282 297286 TATTGATGCAGACAA TTTTAGTGCCGAA TTT TTCGGTACTAAAA TGAATTGTATGGCTT TERM 253 297321 - 297334 + F 71 -5.3 -4.56597 | GTACTAAAATGAATT GTATG GCTT CATAC TTTTTGAGGCAGCGG TERM 254 297756 - 297746 - f 73 -4 -5.14985 | TCAAAGATAGAAAAA TATG TTG CATA AGATGAAAGAAAAAT TERM 255 298272 - 298253 - g 85 -9.3 -4.25104 | overlap 298238 TGCTTTTTATGAAAA GCGATCC CGTGAT GGATCGC TTCAGGTTCCTACGA TERM 256 298418 - 298390 - g 74 -3.8 -5.13741 | overlap 298394 GCAAGGGAATAAAAA CAGAGGAAAGAC GAAAT GCCTCTCCTTCG GTAAAGATAGCACAG BQ02350 297759 - 298619 + | hypothetical protein BQ02360 298651 - 299898 + | aminopeptidase TERM 257 300639 - 300650 + G 72 -4.4 -4.7261 | opp_overlap 300630 300629 ATATACGCAATGTGA TTGC TGAA GCAA TTTCTTTTGGTGGAT mutM 299957 - 300832 + | formamidopyrimidine-DNA glycosylase BQ02380 300916 - 302304 + | hypothetical protein rnd1 302305 - 302925 + | ribonuclease d TERM 258 302978 - 303009 + F 78 -2.4 -5.60689 | gap 1, opp_overlap 302985, overlap 302985 TTATTAATGCAATAG AACAAAATGCCCATA TCT TATAGGCATT-TGTA TTTTTTGTTCTCTCG TERM 259 303003 - 302985 - f 90 -8.2 -4.90381 | opp_overlap 302978 302985 TGCAATAGAACAAAA TGCCCATA TCT TATAGGCA TTTGTATTTTTTGTT TERM 260 302985 - 303003 + F 77 -6 -4.7064 | opp_overlap 302985, overlap 302978 TGCAATAGAACAAAA TGCCCATA TCT TATAGGCA TTTGTATTTTTTGTT TERM 261 303057 - 303102 + F 82 -9.9 -3.61988 | gap 1, opp_overlap 303056, overlap 303063 TTTTATGACATAATT CTTATGGAGTGAGCGCTCTTTA ATT TGAAGAGTGCACACTACA-AAG TTCATTTATGAATCC TERM 262 303500 - 303490 - f 71 -5.4 -4.57353 | opp_overlap 303488 303490, overlap 303485 GGGCACTAGATAAAA TCCA TTA TGGA TATTATATGGAGATA BQ02400 303521 - 303838 + | hypothetical protein TERM 263 304189 - 304200 + F 91 -4.4 -5.80364 | TTCGTGTTTCCTAAT CAAC ATCA GTTG TTTTTTTGTTCAGGT TERM 264 304270 - 304286 + F 74 -6.5 -4.4261 | overlap 304272 304279 TTTTCTGGCTTAGTG CAGAGGT TAT ACCTCAG TTTTCCTGTTACAGA hpbC 305016 - 305849 + | hemin binding protein c TERM 265 305868 - 305903 + F 70 -4 -5.01497 | gap 1, overlap 305871 305874 CTTGTAAGCTTAAAT TGCTAAGAGGCTCTGTC TTT GGTGGAGCCTC-TGGTG TTTTTCTGTGATACT TERM 266 305871 - 305901 + F 71 -6.8 -4.12748 | overlap 305868 305874 GTAAGCTTAAATTGC TAAGAGGCTCTGTC TTT GGTGGAGCCTCTGG TGTTTTTCTGTGATA TERM 267 305874 - 305898 + F 83 -10.7 -3.07484 | overlap 305871 305868 AGCTTAAATTGCTAA GAGGCTCTGTC TTT GGTGGAGCCTC TGGTGTTTTTCTGTG hbpA 306185 - 307003 + | hemin binding protein a TERM 268 307036 - 307063 + F 79 -5.6 -5.02439 | gap 1, opp_overlap 307038, overlap 307035 307034 307038 CACGTCTGAGTTATG AAGAGGCTTCGTT TTT AACG-GGCCTCTA TTTTTGTGATTGTAT TERM 269 307038 - 307061 + F 81 -8.2 -4.12226 | gap 1, opp_overlap 307038, overlap 307035 307034 307036 CGTCTGAGTTATGAA GAGGCTTCGTT TTT AACG-GGCCTC TATTTTTGTGATTGT TERM 270 307613 - 307623 + G 73 -6.8 -4.18018 | TCTTTGCCAGTTATT GCAG CTC CTGC TTTTACGTGGACAGG hbpB 307496 - 308857 + | hemin binding protein b TERM 271 308880 - 308908 + F 100 -10.3 -5.40474 | opp_overlap 308884, overlap 308884 TAAGACTAAGTTTTT AAAAGGCTCTGCC AGC GGTGGAGCCTTTA TTTTTTTGAGAGAAT TERM 272 308884 - 308904 + F 100 -11.1 -5.20328 | opp_overlap 308884, overlap 308880 ACTAAGTTTTTAAAA GGCTCTGCC AGC GGTGGAGCC TTTATTTTTTTGAGA TERM 273 308904 - 308884 - f 71 -6.7 -4.11751 | opp_overlap 308884 308880 ACTAAGTTTTTAAAA GGCTCTGCC AGC GGTGGAGCC TTTATTTTTTTGAGA TERM 274 311476 - 311458 - g 79 -5.2 -5.14965 | opp_overlap 311458, overlap 311459 311460 ACCTTCATCAAAAAA GCGCAAGG CTT CCTTGCAA GTTATCCGTGAGATT TERM 275 311475 - 311459 - g 73 -8.7 -3.68256 | opp_overlap 311458, overlap 311458 311460 CCTTCATCAAAAAAG CGCAAGG CTT CCTTGCA AGTTATCCGTGAGAT TERM 276 311474 - 311460 - g 73 -10 -2.80472 | opp_overlap 311458, overlap 311459 311458 CTTCATCAAAAAAGC GCAAGG CTT CCTTGC AAGTTATCCGTGAGA ileS 309110 - 312025 + | isoleucyl-tRNA synthetase TERM 277 312545 - 312555 + G 75 -5.4 -4.72272 | TGTTGGTGGCGATGG CAGA ATT TCTG TTTTTCCTAAAAAAG TERM 278 312763 - 312739 - g 79 -6.6 -4.62471 | gap 1, overlap 312744 GTCAACGGGCAAAAA TTACACCTGTT GGTC AACAGG-GTAA CGATAAAACGTTAAA BQ02450 312231 - 312830 + | hypothetical protein BQ02460 313357 - 312911 - | nitrogen fixation protein TERM 279 314907 - 314872 - g 79 -7 -4.65969 | gap 1, opp_overlap 314880, overlap 314880 AAGAAAGAAGGAAAA GTTATAAAGAGCGCTCA TGA TGAGCGCTCTTT-TGAG AATAAGCGAAGAGTC TERM 280 314880 - 314900 + G 100 -15.5 -4.11216 | opp_overlap 314872 314880 AGGAAAAGTTATAAA GAGCGCTCA TGA TGAGCGCTC TTTTGAGAATAAGCG TERM 281 314900 - 314880 - g 100 -15.5 -4.06781 | opp_overlap 314880, overlap 314872 AGGAAAAGTTATAAA GAGCGCTCA TGA TGAGCGCTC TTTTGAGAATAAGCG BQ02470 313618 - 315021 + | hypothetical protein TERM 282 315250 - 315270 + G 73 -6.9 -4.2803 | TGAGGGGCGTGGATT GCTTCAAAA AAA TATTGAAGC TTTTGAATTGCAGTC BQ02480 315002 - 315559 + | hypothetical protein TERM 283 315763 - 315778 + F 75 -9 -3.3771 | overlap 315761 TATTTTTGATTCTCA CATCGG GCTT CCGATG TCTTATGCTTTAAAG TERM 284 316465 - 316477 + F 80 -10.5 -3.02511 | opp_overlap 316465 CTTGATTTTAATCAA CCCCC ATT GGGGG TGTTAGCGCGATGAA TERM 285 316477 - 316465 - f 85 -10.5 -3.35813 | opp_overlap 316465 CTTGATTTTAATCAA CCCCC ATT GGGGG TGTTAGCGCGATGAA TERM 286 316611 - 316599 - f 75 -4.9 -4.9138 | opp_overlap 316601 316602, overlap 316594 316588 AGTATCTAAAGAAAA TTTCT TTC AGAAA CTGAACGGTTTCACT TERM 287 316806 - 316795 - f 70 -4.4 -4.64861 | opp_overlap 316795 TTTTTGCAAAATAAA GAGA GCTC TCTC ATGTTTAAATAGACA BQ02490 316852 - 317100 + | hypothetical protein TERM 288 318852 - 318878 + G 91 -10.8 -4.51812 | overlap 318853 AAAAATTCTGGAGGA GCTGCGACAGCT TAT GGCTGTCGCGGA TTTGTTCTTGTGACC TERM 289 318853 - 318877 + G 100 -14.3 -3.30364 | overlap 318852 AAAATTCTGGAGGAG CTGCGACAGCT TAT GGCTGTCGCGG ATTTGTTCTTGTGAC pmbA 318414 - 319745 + | pmbA protein, maturation of antibiotic mccb17 BQ02520 319810 - 320535 + | myo-inositol monophosphatase BQ02530 320581 - 320826 + | hypothetical protein kdtA 321667 - 322989 + | 3-deoxy-D-manno-octulosonic-acid transferase TERM 290 323894 - 323882 - g 71 -4.9 -4.60041 | opp_overlap 323876 323874 323882 AGTCATGTGCAAAAA GATTT AAA AAATC TTATTGTATTTGATG lpxK 322979 - 324010 + | tetraacyldisaccharide 4 27-kinase BQ02560 324279 - 324043 - | hypothetical protein TERM 291 324216 - 324198 - G 75 -8.2 -4.0162 | opp_overlap 324194 TGCTGACAGCACAAA GAGTATAG GTC CCATACTC TACGATTTTATATCC TERM 292 324229 - 324248 + g 86 -8 -4.87893 | CTCTACGATTTTATA TCCATTAT TGGA ATAATGGA TTTTTGCTTCACGTT mutL 326244 - 324406 - | DNA mismatch repair protein BQ02580 326543 - 327631 + | 2'-deoxycytidine 5'-triphosphate deaminase TERM 293 328352 - 328317 - f 83 -8.4 -4.41897 | opp_overlap 328327 328346, overlap 328322 AAGAAATGACTAAAA CTAAAGCCAATGCTTC TCGG AAAGCATTGGCTACAA AAGATTGTTAGCTCT TERM 294 328347 - 328322 - f 100 -12.7 -4.24384 | opp_overlap 328327 328346, overlap 328317 ATGACTAAAACTAAA GCCAATGCTTC TCGG AAAGCATTGGC TACAAAAGATTGTTA lldD 328614 - 329765 + | L-lactate dehydrogenase TERM 295 330153 - 330180 + T 82 -8.7 -3.96188 | opp_overlap 330153 CATGCGTCAATTAAA TTTTCTCTATT ATTATA AATAGAGAAAA TTTATACATATCATT TERM 296 330180 - 330153 - T 82 -8.7 -3.90588 | opp_overlap 330153 CATGCGTCAATTAAA TTTTCTCTATT ATTATA AATAGAGAAAA TTTATACATATCATT TERM 297 331662 - 331646 - T 83 -2.1 -5.9003 | opp_overlap 331646 AAAGCAACAAAAAAA GCTGCTA AGA TTGCTGC TATTATCATCAGATA TERM 298 331666 - 331677 + T 82 -3 -5.64274 | TAAGATTGCTGCTAT TATC ATCA GATA TTTTTTTATCCGTAA BQ02630 332357 - 331695 - | Phage related lysozyme TERM 299 332014 - 332037 + g 70 -2.5 -5.07107 | AATTCAATAGGGACA GCTTCATAA TTCCCT TTATTAAGC TTTTTTAGAAGTTTA TERM 300 335372 - 335350 - R 72 -9.1 -2.60888 | overlap 335349 AGTAGCACAGAATAG GGGCTGGGT TAGTC ACCCAGCCG ACGGGAATAATTTGC BQ02680 338017 - 337697 - | hypothetical protein pheP 338201 - 339631 + | phenylalanine-specific permease TERM 301 339832 - 339842 + G 70 -5.4 -4.4727 | AATGGGTTACAACTT CCAT CAA ATGG TTTTGTGAGTGTTGA BQ02700 339673 - 340353 + | ABC transporter ATP-binding protein TERM 302 340710 - 340721 + G 73 -7.2 -4.04997 | opp_overlap 340710, overlap 340700 GCTTCGATTGAAGCA GGGC TTCA GCCC TTTCGTTGCTTTGGT BQ02710 340350 - 340988 + | hypothetical protein BQ02720 341004 - 341558 + | biotin synthase BQ02730 341702 - 341911 + | hypothetical protein TERM 303 342003 - 342013 + F 73 -4 -5.1675 | TGTAATATTATTTAT GTAT AAA ATAC TTTTTTAATAGCTAA TERM 304 342245 - 342255 + F 71 -3.2 -5.0917 | overlap 342240 ATTTTTCATACTGTT TCTG AGA CAGG TTTGTTTTTTAGTAA TERM 305 342427 - 342467 + F 100 -17.3 -3.89346 | opp_overlap 342431 ATTTTCCATATTTCA GTAAGGTAAAAAAACATAT TAT AAATGTTTTTTTACCTTAC TTTCTACAGTAAAAA TERM 306 342463 - 342431 - f 91 -12.3 -3.17763 | opp_overlap 342427 TCCATATTTCAGTAA GGTAAAAAAACATAT TAT AAATGTTTTTTTACC TTACTTTCTACAGTA TERM 307 344733 - 344721 - f 81 -7.7 -4.42788 | GGCAATTTCACAAAA CACGT GAA ACGTG TGCGGTTATAACATT TERM 308 345616 - 345635 + G 73 -5.8 -4.57073 | gap 1, opp_overlap 345615 345616 GGTAGGATTGACAAT CTG-TGATG CAA CATCAGCAG TTTTTGCACAAAATC serC 345113 - 346276 + | phosphoserine aminotransferase purA 346653 - 347942 + | adenylosuccinate synthetase BQ02810 348183 - 349610 + | hypothetical protein TERM 309 349717 - 349689 - T 74 -5.4 -4.67608 | gap 1, overlap 349694 CAGCCTAATACAAAA GCAAAGAGCCAAC TTAT GCTAGCTCTTT-C TCATTTTAAAATGTG TERM 310 349713 - 349694 - T 74 -6.4 -4.32571 | overlap 349689 TAATACAAAAGCAAA GAGCCAAC TTAT GCTAGCTC TTTCTCATTTTAAAA rpoH1 350639 - 349755 - | RNA polymerase factor sigma-32 rluD 351791 - 350787 - | ribosomal large subunit pseudouridine synthase D aldA 353254 - 351824 - | aldehyde dehydrogenase TERM 311 352310 - 352324 + g 78 -2.8 -5.42198 | ATGATTTCCTGTTTG GTGG CCTGGTC CCAC TTTTGTTTTTTCGGC TERM 312 352449 - 352433 - G 73 -5.8 -4.4891 | TCCACTATTATAAAA GCAGTG ATGTA CACCGC GTTGAAGAGCATTTG TERM 313 352978 - 352995 + g 88 -8.5 -4.6644 | opp_overlap 352969, overlap 352993 TATCAATAGGTGCTC CCATTTC CATT GAAATGG TTTTTGCCATATCTT TERM 314 354671 - 354633 - g 74 -6 -4.43272 | opp_overlap 354635, overlap 354635 ACGCAAAAGGCAAAA CATCGCAATCGCCTAGCG CGT CGTTAGGCAATTATGATT CTGCTTTTATGCCAA TERM 315 354669 - 354635 - g 77 -8.6 -3.81307 | opp_overlap 354635, overlap 354633 GCAAAAGGCAAAACA TCGCAATCGCCTAGCG CGT CGTTAGGCAATTATGA TTCTGCTTTTATGCC TERM 316 354635 - 354669 + G 73 -8.6 -3.72405 | opp_overlap 354635 354633 GCAAAAGGCAAAACA TCGCAATCGCCTAGCG CGT CGTTAGGCAATTATGA TTCTGCTTTTATGCC TERM 317 355356 - 355346 - g 76 -6.8 -4.46514 | opp_overlap 355346 ACGGATCCAAAGAAA GCTG TAA CAGC TTTAAAATGGGCGGT BQ02850 353705 - 356260 + | cell division transmembrane protein TERM 318 356848 - 356864 + G 90 -5.1 -5.62288 | opp_overlap 356848 356851, overlap 356851 GAAAATGCAACGAGA TTAGAGG CTT CCTCTCA TTTTTGTTTTATTGA BQ02860 356443 - 357249 + | sensory box histidine kinase BQ02870 357391 - 358698 + | hypothetical protein mscL 359126 - 358713 - | large-conductance mechanosensitive channel TERM 319 359526 - 359515 - H 77 -3 -5.43866 | GAATTGCGAAAAAAA GAAA GTCT TTTC AATAGTACAAGGATT pyrD 359714 - 360802 + | dihydroorotate dehydrogenase 2 glnA1 361194 - 362615 + | glutamine synthetase TERM 320 363458 - 363480 + G 71 -4.9 -4.55491 | overlap 363459 CCAATTCTTCAGGGT GGAGAATCA GTAGA TGATTCTCG TTTTATGGTTCGCTA TERM 321 363459 - 363479 + G 70 -8.4 -3.32572 | overlap 363458 CAATTCTTCAGGGTG GAGAATCA GTAGA TGATTCTC GTTTTATGGTTCGCT BQ02920 362627 - 363910 + | oxidoreductase TERM 322 365011 - 365029 + G 76 -3.1 -5.27335 | TTAAGATTGATAATT GGCGT TGGGCTGAT ACGCC TTTTTATTTACGAAC zwf 364029 - 365504 + | glucose-6-phosphate 1-dehydrogenase TERM 323 365640 - 365668 + G 86 -4.7 -5.4148 | gap 1, overlap 365644 AGCGGGCAATTTTGG CAGTTTCTGGTG GTAAAA CACCAGAA-TTG TTTTTTCATTATTTA TERM 324 365644 - 365665 + G 88 -8.8 -4.73828 | overlap 365640 GGCAATTTTGGCAGT TTCTGGTG GTAAAA CACCAGAA TTGTTTTTTCATTAT pgl 365516 - 366283 + | 6-phosphogluconolactonase folD 369100 - 368201 - | methylenetetrahydrofolate dehydrogenase TERM 325 370309 - 370319 + G 70 -3.2 -5.00616 | AAAATACCTATTGTA TGGG AAT CTCA TTTTTTAGCGCAGCC BQ02970 369415 - 371295 + | hypothetical protein BQ02980 371758 - 372492 + | hypothetical protein gshA 372570 - 373943 + | glutamate-cysteine ligase BQ03010 374582 - 375937 + | Sodium /dicarboxylate symporter BQ03020 376751 - 376041 - | hypothetical protein TERM 326 377005 - 376988 - H 79 -5.7 -5.13473 | ATTACATTTAAAAAA TACAAAA GAAA TTTTGTA CAGGGAAGCTATAAA comF 377034 - 377819 + | competence protein comF grxC 377868 - 378125 + | glutaredoxin ubiG 378891 - 378148 - | 3-demethylubiquinone-9 3-methyltransferase TERM 327 378291 - 378301 + g 71 -4 -4.93296 | TTTTAAGTTCCTGAG GTTT TAG AAAC TTTTTATAGTCATGG lysC 379084 - 380340 + | aspartate kinase nhaA 382641 - 381265 - | Na+/H antiporter TERM 328 382762 - 382744 - R 74 -6.8 -4.40199 | AAAAATAGGAATAAA GCTCTTAA ATC TTAAGAAC AAGGTTACCATTTTA BQ03080 384484 - 382793 - | hypothetical protein TERM 329 383539 - 383577 + g 70 -2.6 -5.11937 | gap 1, opp_overlap 383549, overlap 383529 383541 CATCGGCTGAGGTAA TGGCAAGAAG-GGTATT TAGAAT AATACCATTTCGTGCTA TTTTTTCAGCTTCTT TERM 330 383694 - 383713 + g 72 -3.6 -5.06414 | TTGAAATTGCCAAGA GAGAAGGA AGTA TTTTTCTC TTTTTCTTCGAAAAC TERM 331 385263 - 385273 + G 73 -6.8 -4.20454 | overlap 385265 CTTCTGTTTTTTTGA TGCC AAT GGCA TTTGGTTCTTTGTTG TERM 332 385398 - 385415 + G 72 -9.9 -2.99421 | overlap 385397 385400 TTACACCGGTTGGCG CAGCAGT TGCT ACTGCTG GTATTTTATATTTGG TERM 333 386466 - 386484 + G 91 -13.2 -3.04144 | TTGCGATTGGTGCAG GGTGTGAG TTT CTCACACC TATTGGACATCAAAG BQ03090 384854 - 386626 + | hypothetical protein BQ03100 387270 - 387941 + | hypothetical protein TERM 334 388016 - 388028 + G 77 -7.7 -4.16182 | overlap 388017 TTAATCGTTTGGTTG GCCAA AAA TTGGC TTTGGTTTGTGATAA engA 387946 - 389379 + | GTP-binding protein EngA TERM 335 390494 - 390482 - g 77 -10.5 -3.39018 | overlap 390480 CGATTAGGGCAAAGA GGCGC ATC GCGCC AAGATAAAAGGACCT BQ03120 390104 - 390511 + | hypothetical protein TERM 336 390518 - 390504 - f 100 -10 -4.66537 | CGCGCCAAGATAAAA GGACCT AAG AGGTCC AATAAATGAGGTTAA atpB 390535 - 391293 + | F0F1 ATP synthase subunit A TERM 337 391316 - 391299 - f 83 -7.7 -4.75472 | overlap 391300 GGGACATTAATAAAA CTGACGG TTTT CCGTCAA ATGGTGCAATTTTGC TERM 338 391315 - 391300 - f 75 -9 -3.4456 | overlap 391299 GGACATTAATAAAAC TGACGG TTTT CCGTCA AATGGTGCAATTTTG atpE 391348 - 391578 + | F0F1 ATP synthase subunit C TERM 339 391591 - 391627 + F 74 -5.8 -4.46656 | overlap 391586 391624 TAATCATTTTTGAAA GGGTATACCTGCTTTC TTTAT GAGGGCGGGCATGCTC TTTTGGTGTTGTAAC atpF1 391718 - 392284 + | F0F1 ATP synthase subunit B' atpF2 392296 - 392790 + | F0F1 ATP synthase subunit B TERM 340 393068 - 393053 - T 71 -3.3 -5.13741 | opp_overlap 393053 CTAAGCTAAGAAAAA GAAGA ATTCTA TCTTC ATCATTTTTCCAGTT glyS 395697 - 393475 - | glycyl-tRNA synthetase subunit beta TERM 341 394027 - 394040 + g 76 -4.5 -5.07486 | TTCCAGAACGAGATT CTGCG ATTG CGTAG TTTTTGTTCGAGATG TERM 342 394052 - 394062 + g 85 -5.4 -5.33131 | GTAGTTTTTGTTCGA GATG TTT CATC TTTGTTTTTTTGTTG TERM 343 394474 - 394490 + g 100 -10.9 -5.31275 | TAGGAGAGGGTCTGC TTGCACC GAA GGTGCAA TTTTTTGTGCTAAGG TERM 344 394724 - 394736 + g 77 -6.3 -4.50761 | CAGACAACTTTACTA TTTCC CTT GGAAA TTTCTTTACCTTCAT glyQ 396641 - 395697 - | glycyl-tRNA synthetase subunit alpha BQ03190 398438 - 396744 - | hypothetical protein ispB 399602 - 398532 - | octaprenyl-diphosphate synthase BQ03210 399804 - 400595 + | hypothetical protein sohB 400792 - 401643 + | protease sohB TERM 345 402653 - 402667 + G 77 -6.4 -4.53163 | opp_overlap 402655 TTATATGCCTTAGAT GAGAGT GGA GCTCTC TTTTCTCGTATGTCC TERM 346 402728 - 402743 + G 74 -4.6 -4.87786 | opp_overlap 402725 402726 402728, overlap 402730 AAAGATAAAGAAGCA GCGCAG CAGG CTGCAC TTTTTATCAAATTGA thrB 401900 - 402808 + | isopentenyl monophosphate kinase TERM 347 403195 - 403179 - f 70 -8.1 -3.31726 | GGGCTTTAGATAAGA TGCAATT GCA AATTGCA GTGTGGGTTGAAGGT BQ03250 404000 - 404440 + | hypothetical protein TERM 348 404470 - 404498 + T 95 -9 -5.27335 | gap 1, opp_overlap 404470, overlap 404474 CGTTTGTGAATATAA CAGCCGCTATCAT ATCT ATGATGGC-GCTG TTTTTGTTTCAGAAA TERM 349 404474 - 404495 + T 77 -9.5 -3.15131 | opp_overlap 404470, overlap 404470 TGTGAATATAACAGC CGCTATCAT ATCT ATGATGGCG CTGTTTTTGTTTCAG BQ03260 406212 - 405109 - | translation-associated GTPase TERM 350 405172 - 405186 + g 100 -12.8 -4.18164 | overlap 405163 TTCTTTGCCTTCATC GCGGGC TTT GCCCGC TTCTTTTGCACCGTT TERM 351 406606 - 406584 - g 79 -9.2 -3.86524 | ACATTCCGGCAGAAA TACAGGCC TTATATG GGCCTGTA ACAAATGAGCCTTAT BQ03270 406433 - 407209 + | hypothetical protein TERM 352 408320 - 408309 - T 71 -3 -5.07652 | GCTTTTAAAATAAAA TGAA TGCT TTCA ACAAAAAAACGGGTA pth 409126 - 408545 - | peptidyl-tRNA hydrolase rplY 409834 - 409208 - | 50S ribosomal protein L25/general stress protein Ctc prsA 412359 - 411427 - | ribose-phosphate pyrophosphokinase BQ03320 414033 - 413242 - | hypothetical protein TERM 353 413420 - 413444 + g 77 -6.5 -4.59511 | opp_overlap 413422, overlap 413422 413443 AATGTCCATAGGTTA AAGCTAAAGTG TTT TACTTTAGCTG TTTTTAAAAAATATT TERM 354 413442 - 413422 - G 73 -8.4 -3.63627 | opp_overlap 413420 413422 TGTCCATAGGTTAAA GCTAAAGT GTTTT ACTTTAGC TGTTTTTAAAAAATA TERM 355 413422 - 413442 + g 79 -9.1 -3.90762 | opp_overlap 413422, overlap 413420 TGTCCATAGGTTAAA GCTAAAGTG TTT TACTTTAGC TGTTTTTAAAAAATA BQ03330 415192 - 414101 - | hypothetical protein TERM 356 414814 - 414832 + gr 87 -5.2 -5.4148 | opp_overlap 414804, overlap 414804 AAGATGAAAGACGTT CTTGCTGT TCT ACTGCGAG TTTTTTACTTATTTC TERM 357 414974 - 414986 + gr 71 -7.7 -3.53012 | opp_overlap 414973 AGGGTGAGGACAACC CTGGA CCT TCCAG TTTGCGAGGGCCCAA lgt 416045 - 415167 - | prolipoprotein diacylglyceryl transferase BQ03350 416308 - 416565 + | hypothetical protein TERM 358 416686 - 416707 + F 82 -4.5 -5.47218 | CCGTTTGTTTTCAGA GTGGTTTTT ATAA AAAAAGCAC TTTTTTTGAATCAAG BQ03360 416766 - 416996 + | hypothetical protein TERM 359 417094 - 417127 + GT 75 -9.7 -2.60685 | opp_overlap 417118, overlap 417093 417114 417115 AAACGGGCAAATTAT CGTCTTGCTTTTTCA TGGA TGGAAGAGCAAGAGG CTCTTCATTTAGCTT TERM 360 417412 - 417398 - gT 71 -7.8 -3.53012 | CTTGGTCTGGGGAAA GCGCCT ACA AGGCAC TGCAATATACTTTGT BQ03370 416950 - 417450 + | hypothetical protein envZ 418843 - 417503 - | sensor histidine kinase ompR 419555 - 418851 - | transcriptional regulator ompR TERM 361 419589 - 419577 - H 83 -4.9 -5.43866 | GAACCTTGAAAAAAA TTTAG TTT CTAAA AAATTCAAGTTTACA BQ03400 419695 - 420348 + | hypothetical protein BQ03410 421136 - 420423 - | hypothetical protein TERM 362 421536 - 421550 + H 79 -4.2 -5.33921 | ATTTAACTTGTTTGA GCTACA GAG TGTTGC TTTTTTGATTGCTTT TERM 363 421851 - 421862 + H 71 -3 -5.07652 | TACCCATGGTTTTAT TGAA GATG TTCA TTTTATTTTAAAACG TERM 364 422579 - 422564 - H 80 -4.8 -5.31519 | ATAGGTAAATAAAAA TAAGAA ATTT TTCTTA GGGTGATAATACTGT TERM 365 422708 - 422718 + H 71 -3.2 -5.0707 | TATGAGACATTTCAT GAGC TTA GTTC TTTCTTTTTGTGTTT rnhB 422818 - 423489 + | ribonuclease HII TERM 366 423931 - 423942 + G 70 -3.6 -4.92239 | overlap 423928 GCATTAGTCCTACTT CGGC TGGA GCTG TTTTTGCATTTTTAG BQ03430 423486 - 424448 + | hypothetical protein BQ03440 424451 - 425860 + | oxidoreductase BQ03450 426010 - 426534 + | hypothetical protein purD 428416 - 427142 - | phosphoribosylamine--glycine ligase TERM 367 427549 - 427537 - G 80 -7.7 -4.3129 | GACGCATCATTAAAA CCTGA CAT TCAGG ATCACCGAATCGTAC ubiA 428508 - 429512 + | prenyltransferase TERM 368 429997 - 430013 + T 73 -9.5 -2.92667 | overlap 429994 GCCGTTTCATCTTTA TAAAGGC AAA GCCTTTA TGCTTTAAAGCTTGG pdxH 430656 - 430033 - | pyridoxamine 5'-phosphate oxidase dnaJ2 430980 - 431882 + | heat shock protein DnaJ fabI2 432003 - 432821 + | enoyl-(acyl carrier protein) reductase aroC 432967 - 434067 + | chorismate synthase ribA 434071 - 435177 + | GTP cyclohydrolase II xseB 435185 - 435439 + | exodeoxyribonuclease VII small subunit TERM 369 435494 - 435514 + F 80 -4.7 -5.26316 | overlap 435486 GTAATATCGTTTATA GGAACGGAT TTT ATCAGTTTC TTTTTTATAAAATGA TERM 370 437127 - 437145 + G 79 -9.6 -3.65314 | AGGTGTTGGCATGGA TTTACCGC AGC GCGGTGAA TTATTAGAGATTGGA dxs 435670 - 437592 + | 1-deoxy-D-xylulose-5-phosphate synthase TERM 371 437729 - 437746 + G 82 -8.5 -4.17309 | opp_overlap 437729 437726 AAGCTGGGCAAATTA TTTCTGC TGAC GCAGAAA TTGTTGTTTGTAATC tlyA 437704 - 438237 + | hemolysin-like protein TERM 372 438645 - 438624 - T 73 -3.7 -5.14477 | gap 1, opp_overlap 438627 438627, overlap 438627 GATACACTTAAAAAA CATGGG-ATC GAT GATACCCTTG TTTCTCCTTTGATTG TERM 373 439840 - 439851 + T 71 -3 -5.07652 | CCGATATCCTTTTGT TGAA GGCG TTCA TTTTATTTTAAAAAC tldD 441995 - 440577 - | tldD protein BQ03580 442636 - 442097 - | hypothetical protein TERM 374 442672 - 442658 - H 75 -8.6 -3.35813 | CCTTACCTGAATCAA CACGAT GCT ATCGTG CATAGAGTTACATAA TERM 375 443187 - 443197 + G 81 -5.4 -5.08011 | opp_overlap 443187 CCTGTTTCTATAAAT CCAT GGT ATGG TTTTTTAGCAATTTT cyoE 443031 - 443966 + | protoheme IX farnesyltransferase TERM 376 444117 - 444103 - f 77 -5.7 -4.8667 | opp_overlap 444103 TAGAGTGCATAAAAA TAGCC TGCTT GGCTA TATGATCAAAGTTAT ispH 444150 - 445172 + | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase TERM 377 445483 - 445503 + F 87 -9.7 -4.0257 | opp_overlap 445485, overlap 445477 CAACGATCGGTGAAT CAGCAGGAG GTT CTGCTGCTG TTATTACTTTTTAGG rnhA 446165 - 446632 + | ribonuclease HI BQ03640 447611 - 448195 + | hypothetical protein BQ03650 451128 - 448243 - | hypothetical protein TERM 378 448357 - 448368 + g 76 -4.4 -5.0925 | overlap 448343 GCCTTCTTGGCGCAG GAAG ATCG CTTC TTTTTCATTTTCAAC TERM 379 448435 - 448446 + g 86 -4.4 -5.4505 | opp_overlap 448435 CATATTGATAATGGA CTTG AGAA CAAG TTTTTTCTTAGGCGA TERM 380 450755 - 450737 - G 86 -7.4 -5.1244 | opp_overlap 450736 450740 CGATCAAGAGAAAAA CCTTCACT TGG AGTGATGG ATTGAATCCGCGCTG BQ03660 452854 - 451580 - | processing protease protein TERM 381 451864 - 451877 + g 70 -3.1 -4.90013 | GTGCTCGTTGAAGTT CATTC GCAT GGATG TTTTTGCTTGCCTTA TERM 382 454691 - 454664 - R 87 -6.3 -5.47914 | AAAAAGCACAAAAAA CAGCTTCCCAA TTACTT TAGGGAAACTG CAATTTAAATACTCT BQ03680 455125 - 454760 - | hypothetical protein BQ03690 455730 - 455368 - | hypothetical protein BQ03700 456271 - 455924 - | hypothetical protein TERM 383 456451 - 456421 - R 71 -8.6 -3.09015 | opp_overlap 456421, overlap 456424 456431 TGTATATTTAGTCAA TAATTAAAAATTCA TAA TGAATTTATAATTA TTTTAATTTTGAATA TERM 384 456421 - 456451 + r 93 -8.6 -4.68645 | opp_overlap 456421 456424 456431 TGTATATTTAGTCAA TAATTAAAAATTCA TAA TGAATTTATAATTA TTTTAATTTTGAATA TERM 385 456441 - 456431 - R 70 -4 -4.99435 | opp_overlap 456421, overlap 456424 456421 GTCAATAATTAAAAA TTCA TAA TGAA TTTATAATTATTTTA BQ03710 458025 - 457330 - | phosphatase TERM 386 457586 - 457596 + g 87 -3.2 -5.7946 | overlap 457580 AGAAAAACATCTGGT GCAG GCT TTGC TTTTTTTGTTCCAAC TERM 387 459261 - 459275 + G 84 -10 -3.89956 | opp_overlap 459260 TGTAGCATTCAACAG CCTGCT TGA AGCAGG TTTACTCTGTCCTGG ccrM 458386 - 459522 + | adenine DNA methyltransferase protein TERM 388 459546 - 459556 + T 70 -4 -5.0133 | overlap 459531 459535 TCAGTTCATGCTGAA TGAA TAT TTCA TTTTTTCAGCAGGTA mutY 460681 - 459575 - | A/G-specific adenine glycosylase TERM 389 459603 - 459616 + g 74 -3.8 -5.17353 | opp_overlap 459594, overlap 459601 AAAGGATTGGGAATT GCCA AGGCAA TGGC TTTTTTCATAACTGT TERM 390 459988 - 460004 + g 70 -9.5 -2.71712 | overlap 459987 CTACTTTTTGCATCT TTTCTGC TTT GCAGAAA CTTTGAAGAGGGCAG BQ03740 460841 - 461341 + | hypothetical protein TERM 391 461339 - 461359 + F 72 -2.5 -5.35815 | opp_overlap 461339, overlap 461355 GAAAAAAAGAGTAAA TAGAGTAGA GTA TCTTCCCTA TTTTTCTTTAGTATA TERM 392 461636 - 461650 + G 85 -7.1 -4.93898 | TGCTTCATTGACGTG TGCGC CTTGT GCGCA TTTTTATAATGATGT BQ03750 461424 - 462080 + | hypothetical protein TERM 393 464097 - 464068 - g 72 -8.5 -3.53091 | AGCGGCCGTCGTAAA GCGCTGGATAAGC TTTT GCCAATGCAGCGC TCAGACTTTGCTCAA ppdK 462262 - 464928 + | pyruvate phosphate dikinase BQ03770 465991 - 465149 - | hypothetical protein TERM 394 466576 - 466559 - H 72 -4.9 -4.66537 | TGTCGCAACAGAAAA TTGTAAC AGGT GCTACAA AGAATTCTGAGCTTC TERM 395 466894 - 466905 + H 71 -3 -5.07652 | TACTTGACATTTTGG TGAA GGCT TTCA TTTTATTTTAAAAAC TERM 396 466935 - 466946 + H 70 -4.4 -4.65916 | CAGGGGCTTAATGAT GAGA ATTT TCTC TTTTCTTCAGGTAAA TERM 397 467686 - 467709 + H 72 -2.6 -5.24129 | opp_overlap 467701 467702, overlap 467690 AAACGAGTGTTCAGT TTCATAAAAT ATTA ATTTTATAAA TTTTTTATAAAGAAG BQ03780 467783 - 468160 + | hypothetical protein BQ03790 468272 - 468682 + | hypothetical protein BQ03800 469220 - 468783 - | Ros/MucR family transcriptional regulator TERM 398 469203 - 469222 + g 76 -2.1 -5.41359 | overlap 469189 469188 469206 469207 GCTTTCAGTCTCTAA GACTGGA CGATGT TCCATTC TTTTTTCCTTTAATT TERM 399 469678 - 469656 - H 79 -3.6 -5.56264 | overlap 469649 469658 469669 TCTAAATATAAAAAA TATTTTAAAA GAT TTTTAAAATT CAAAACAATATGGTG TERM 400 469676 - 469658 - H 72 -6.2 -4.40478 | overlap 469649 469656 469669 TAAATATAAAAAATA TTTTAAAA GAT TTTTAAAA TTCAAAACAATATGG ptrB 470113 - 472206 + | protease II TERM 401 472224 - 472264 + T 87 -12.9 -2.85351 | opp_overlap 472230, overlap 472230 TGAATATCTTTTCTT TTTAAAGGCTCTATAATTT TAT GAATTACGGAGCCTTTAAA TATAATATAAAAAAA TERM 402 472230 - 472258 + T 73 -7.5 -3.73414 | opp_overlap 472230, overlap 472224 TCTTTTCTTTTTAAA GGCTCTATAATTT TAT GAATTACGGAGCC TTTAAATATAATATA sodB 472903 - 472301 - | superoxide dismutase TERM 403 473561 - 473541 - R 84 -5.5 -5.5208 | overlap 473544 TCAGAAGATAAAAAA TCATCAAAT TTA ATTTGAAGA GCTTAAATTCCAATG BQ03850 475375 - 474308 - | toxin secretion protein TERM 404 475529 - 475545 + r 70 -3.7 -4.88736 | opp_overlap 475529 475530, overlap 475520 475530 GATAGCCATTTAAAA TGTATCA TTA TGATACC TTTTTATAAATGATG TERM 405 475948 - 475984 + r 72 -2.5 -5.27709 | opp_overlap 475954 475956, overlap 475954 475958 ATGTAAGACGTATTT CAGAGATATCTATTATT TAT AATAATATATATTTTAG TTTGTTTTTTTATGA TERM 406 475954 - 475978 + r 70 -4.5 -4.78512 | opp_overlap 475954 475956, overlap 475948 475958 GACGTATTTCAGAGA TATCTATTATT TAT AATAATATATA TTTTAGTTTGTTTTT TERM 407 476409 - 476393 - R 70 -3.8 -4.90296 | opp_overlap 476393 AAAATTCTATAAAAA GATTAT AAGAA ATAATC ATTTTTTTATTACTT BQ03860 477603 - 476818 - | hypothetical protein TERM 408 477329 - 477319 - G 73 -6.8 -4.2204 | AAGTCTAATAAATAA CACC AAT GGTG TGGCAGTGATCAATG BQ03870 478753 - 478214 - | hypothetical protein TERM 409 478250 - 478264 + g 82 -8.6 -4.16016 | opp_overlap 478249, overlap 478247 AGTTGCAGATGAGAG GAAAGC TTC GCTTTC TTTCTTAGCAAGTAA BQ03880 479342 - 478746 - | hypothetical protein mrcA1 481510 - 479360 - | penicillin-binding protein mrcA TERM 410 479627 - 479611 - G 70 -9.4 -2.63596 | TGCGATGCCATATCA TGGCGG GTATG CCGCCA CCAAAAGCCCGATTC TERM 411 480821 - 480803 - G 86 -7.4 -5.13722 | overlap 480805 TTTACCAAAATAAAA TTTCGCAG CTG CTGCGATA CCAAAATTGTTTCCT TERM 412 480819 - 480805 - G 73 -10 -2.79205 | overlap 480803 TACCAAAATAAAATT TCGCAG CTG CTGCGA TACCAAAATTGTTTC TERM 413 480948 - 480962 + g 73 -5.8 -4.60255 | GTTATGGTTCTTTCA TTTGTT AAG AACAAA TTTTTAGCCAGTTGT BQ03900 481835 - 482113 + | hypothetical protein TERM 414 482340 - 482352 + G 70 -7.7 -3.7574 | opp_overlap 482340 482339, overlap 482338 AATGGCGCAAAGAAG GGCAT CTC ATGCC TGTTTTAATGCTAAC feuP 482132 - 482800 + | two-component system regulatory protein TERM 415 483750 - 483760 + G 71 -6.8 -3.98661 | opp_overlap 483749 CATTGCAGCACAACG CGAC AGT GTCG TTTATCATGCATCTG TERM 416 484000 - 483975 - g 83 -3.4 -5.64274 | opp_overlap 483977, overlap 483978 TTATTTAGAAAAAAA TATTGAAGAA GCAGAA TTCTTCAGTA TCCTCGTAGAAGATG feuQ 482797 - 484221 + | sensor histidine kinase cycH 484488 - 485225 + | cytochrome c-type biogenesis protein cycH TERM 417 485437 - 485423 - f 76 -3.6 -5.24531 | overlap 485424 AGTTGCTAGAAAAAA CTCTTT TAC AAAGAA GTAAGAAAGACGCTG TERM 418 485711 - 485742 + G 86 -4.6 -5.40072 | gap 1 GTAATTGCGATAAGT CTTATCATGT-ATGC AAT GCGTAATATGGTAAG TTTTTTTCGAACACC cycJ 485594 - 486073 + | cytochrome c-type biogenesis protein CcmE TERM 419 487015 - 487029 + G 74 -4.2 -5.16681 | overlap 487017 ATCCAGCACGTGGGC GGGCAA TTC TTGCAC TTTTATTCTTTTTCA cycK 486081 - 488069 + | cytochrome c-type biogenesis protein cycK TERM 420 488301 - 488322 + G 71 -3.7 -4.89477 | overlap 488302 488305 GTTTAAAAATAGGTG ACAGTGATC AGCA GATCATTGA TTTTCTTGTTGAGCG cycL 488066 - 488518 + | cytochrome c-type biogenesis protein cycL htrA1 488703 - 490214 + | Serine protease BQ03980 490295 - 490981 + | two-component response regulator TERM 421 491762 - 491776 + G 86 -10 -4.07568 | opp_overlap 491761 491760 CGCGTCTTAGAAATC GTGCTG AAG CAGCAC TTTTGGGACAAAAAA BQ03990 490978 - 492360 + | sensor histidine kinase glnE 492488 - 495412 + | glutamate-ammonia-ligase adenylyltransferase TERM 422 495935 - 495953 + F 74 -6.1 -4.60487 | opp_overlap 495937 TTTATACCTTTTAAT GATGATA TTATT TATCATC TTTTTGGGGCTAATA TERM 423 496557 - 496567 + G 85 -6.8 -5.06414 | overlap 496549 CCTGAGTCTGTAGTG GCAG TTC CTGC TTTTTCTTGGACAGG hbpD 496452 - 497336 + | hemin binding protein d TERM 424 497359 - 497388 + F 100 -10.1 -5.08169 | opp_overlap 497364, overlap 497364 CAGGATTAAATTTTC AAAAAGCCCCATT TTAG AGTGGGGCTTTTA TTTTTTCAGATATAT TERM 425 497383 - 497364 - f 82 -7.8 -4.64657 | opp_overlap 497359 497364 TTAAATTTTCAAAAA GCCCCATT TTAG AGTGGGGC TTTTATTTTTTCAGA TERM 426 497364 - 497383 + F 100 -10 -5.42198 | opp_overlap 497364, overlap 497359 TTAAATTTTCAAAAA GCCCCATT TTAG AGTGGGGC TTTTATTTTTTCAGA TERM 427 497671 - 497682 + F 70 -4.4 -4.80736 | opp_overlap 497671 TGTAAAGAGAGTAAT GAGA AAAT TCTC TTTCTTTGTTTCATA BQ04020 497734 - 498258 + | methyltransferase (fragment) BQ04030 500587 - 498266 - | two-component sensor histidine kinase TERM 428 500557 - 500578 + g 70 -8.1 -3.65426 | gap 1 CAGCGTATACCTCCG TTGG-CGCAT TAT ATGCGTCCAA TTTAGCCATTTCTCG pepN 503503 - 500873 - | aminopeptidase N BQ04050 504410 - 503583 - | DNA polymerase TERM 429 503879 - 503910 + g 75 -10.2 -3.15999 | overlap 503881 CTCTTGGTGTTGGTG TGCGATTTCCTGGT GGAC GCCAGGGAATCGTG TTGGCTATGTAGACA TERM 430 503881 - 503908 + g 85 -12.8 -3.14125 | overlap 503879 CTTGGTGTTGGTGTG CGATTTCCTGGT GGAC GCCAGGGAATCG TGTTGGCTATGTAGA TERM 431 505388 - 505404 + r 72 -9.5 -2.7497 | overlap 505387 505390 CATAATATTATTTAG CACTGTT TTT AACAGTG GTTTAAAAGTAATGT thiD1 506142 - 505396 - | phosphomethylpyrimidine kinase TERM 432 505761 - 505781 + g 70 -5.5 -4.34866 | overlap 505764 GAGGGAAAAGTTTAT TGATCATAG TTT CTATGATTG TTTCTGTTGTTAGCT TERM 433 505764 - 505778 + g 76 -7.2 -4.27463 | overlap 505761 GGAAAAGTTTATTGA TCATAG TTT CTATGA TTGTTTCTGTTGTTA thiE 506738 - 506133 - | thiamine-phosphate pyrophosphorylase thiG 507508 - 506735 - | thiazole synthase thiG1 507710 - 507513 - | sulfur carrier protein ThiS thiO 508664 - 507714 - | thiamine biosynthesis oxidoreductase thiC 510511 - 508745 - | thiamine biosynthesis protein ThiC TERM 434 509317 - 509328 + g 80 -4.4 -5.2204 | TCACCTGTACATCTT TTGC CCAG GCAA TTTTTGTTAATTCTC hmuV 512366 - 511572 - | hemin importer ATP-binding subunit hutC 513460 - 512363 - | hemin ABC transporter, permease protein hutB 514367 - 513465 - | periplasmic hemin-binding protein TERM 435 514105 - 514094 - G 70 -5.8 -4.4715 | GTGCAAGTGATAAAA CACC CTCA GGTG AAAGAGCACGCATAT hemS 515426 - 514401 - | hemin degrading protein TERM 436 514613 - 514641 + g 80 -4.7 -5.26875 | opp_overlap 514613 ATTTTTGATCGAGAA CATTAAGCCAA GATCCCA TTTGCTTAATG TTTTTTACTTGCCCA TERM 437 515523 - 515489 - R 93 -11 -3.9377 | opp_overlap 515501, overlap 515520 ACAATTCCAAGGAAA TGAGTTGAACGATTTT CAA AAAATGATTCAACTCA CTACCAAGTAAGGTT hutA 517864 - 515687 - | Heme receptor precursor TERM 438 517955 - 517924 - H 71 -3 -5.04597 | gap 1, overlap 517926 ACTTACATATAAAAA CCTGACTTGCT-GTT CAA AACTAGCCAGCCACG CAGAAATGATTTAGT TERM 439 518680 - 518662 - g 100 -4.6 -5.89947 | overlap 518665 518677 518678 GAAAGGCAAAAAAAA TATGTTGT AGG ACAACGTA CCAGTCGTACAAAAG tonB 518104 - 518883 + | tonB protein slt 521090 - 518997 - | soluble lytic murein transglycosylase precursor TERM 440 519090 - 519103 + g 71 -6.7 -4.12532 | TTCCATGACACGCAT CACGT AATT ACGTG TTTCTGTATAAGGGA TERM 441 519672 - 519662 - G 75 -2.6 -5.24129 | GTTCTCTATAAAAAA TTTT AGC AAAA TCAGCATAGCCGGCT TERM 442 520217 - 520234 + g 82 -7.7 -4.63542 | CACTATATTGTCCAG TTCGCCG AAGA TGGCGAA TTTTTGCAAATTGTA TERM 443 521253 - 521286 + H 89 -13.4 -2.72227 | opp_overlap 521246 521243 521260 521262, overlap 521246 521257 GAAATTCATCTTGCT TCAATGATAGAGCA AGATTA TGCTCTATCATTGG TAATTAAAAGCTATT TERM 444 521257 - 521282 + H 83 -10.6 -3.27298 | opp_overlap 521246 521243 521260 521262, overlap 521246 521253 TTCATCTTGCTTCAA TGATAGAGCA AGATTA TGCTCTATCA TTGGTAATTAAAAGC dapA 521337 - 522221 + | dihydrodipicolinate synthase TERM 445 522266 - 522252 - g 88 -4.2 -5.84381 | CCATGAACAAAAAAA GGAATG CAC CAGTCC GAAAAATAATTGCGG smpB 522239 - 522715 + | SsrA-binding protein BQ04210 523431 - 522763 - | hypothetical protein TERM 446 523452 - 523468 + H 95 -5.3 -6.15259 | TAGACATTAATTATT TTTTATA TTT TATAAAA TTTTTTTTTGAGTTG TERM 447 523611 - 523599 - H 73 -7.7 -3.81557 | opp_overlap 523582 523579 523598 TTTTGCAAAGAAAGA CACTC TTT GAGTG ATGTATTCGATAAAT TERM 448 523803 - 523817 + H 70 -4.2 -4.67048 | opp_overlap 523802 CTTTGTTTGAATTAG GTACTC TTG GAGTCC TTTATTTTAGGGTGG rpoZ 523988 - 524386 + | DNA-directed RNA polymerase subunit omega TERM 449 524640 - 524667 + G 84 -7 -4.98911 | GCAATGCGCAAGCAT GGTCATCAGAAG CGTG CTTCGGGTGATC TTTATTTTTCTCATC TERM 450 525683 - 525718 + G 73 -7 -4.25104 | opp_overlap 525683 525689 525690, overlap 525690 AGAGTTTTTAGAACA CACAAAGCTTGAGCTT TTTC AAGATCAAGTTTTCTG TTTTACTCCGAAAGG TERM 451 525690 - 525711 + G 79 -5.9 -4.91977 | opp_overlap 525689 525683 525690, overlap 525683 TTAGAACACACAAAG CTTGAGCTT TTTC AAGATCAAG TTTTCTGTTTTACTC spoT 524538 - 526766 + | GTP pyrophosphokinase pyrE 526784 - 527362 + | orotate phosphoribosyltransferase TERM 452 527916 - 527936 + G 80 -4.7 -5.3104 | CATGAGACCGATGTT CTTAGGAGG TAT CCTTTTAGG TTTTATTTTTGGTGG BQ04250 527461 - 528039 + | hypothetical protein acpS 528060 - 528461 + | 4'-phosphopantetheinyl transferase lebB 528542 - 529354 + | Signal peptidase I rncS 529302 - 530042 + | ribonuclease III era 530035 - 530940 + | GTP-binding protein Era recO 530942 - 531673 + | DNA repair protein RecO panC 531710 - 532570 + | pantoate-beta-alanine ligase panB 532574 - 533401 + | 3-methyl-2-oxobutanoate hydroxymethyltransferase BQ04330 535388 - 534768 - | hypothetical protein BQ04340 536254 - 535388 - | hypothetical protein TERM 453 535641 - 535630 - G 78 -7.2 -4.3534 | opp_overlap 535629 535632, overlap 535632 TTTTAACGATCAAAA CGCG GCGA CGCG CTGTATGTCGATGGT TERM 454 535661 - 535671 + g 70 -5.4 -4.32579 | overlap 535665 ATGTCGATGGTGCAT TCGT GAA ACGA TTTCTTGTCCGATAT TERM 455 535929 - 535963 + g 77 -10.2 -3.41126 | overlap 535932 AAGTTATTTGATTCA TTATTCCAAGAAATTG TAA CAAGTTCTTGGAATGG TTGTGAAATTTCTAC TERM 456 535932 - 535960 + g 81 -11.9 -2.85508 | overlap 535929 TTATTTGATTCATTA TTCCAAGAAATTG TAA CAAGTTCTTGGAA TGGTTGTGAAATTTC TERM 457 536913 - 536930 + G 73 -5.6 -4.63527 | overlap 536912 GTTGCGTATTGAAGG GGATGT ATCATC ACATCC TTTTTGGCGTGATGA TERM 458 537252 - 537272 + G 72 -4.7 -4.66833 | overlap 537246 GCCTCATACGCTTGA GGAAAAGTT TCA AGCTTATCC TTTTTCGCCTTCAGG pyrC1 536320 - 537648 + | dihydroorotase BQ04360 538239 - 537868 - | hypothetical protein cysS 538709 - 540217 + | cysteinyl-tRNA synthetase TERM 459 540754 - 540729 - g 70 -2.7 -5.09173 | gap 1, opp_overlap 540720, overlap 540720 540733 GAAGAGGGTAAAAAA TCTACCATTTTA GTA CAAAATGGC-GA AATTCTTGATGATGG BQ04380 540261 - 540932 + | hypothetical protein BQ04390 541048 - 542931 + | ABC transporter, ATP-binding protein psdA 543053 - 543754 + | phosphatidylserine decarboxylase TERM 460 544233 - 544254 + G 79 -8.7 -4.0219 | overlap 544234 CAGTTATTTTATTGG TGTTCCTGC ACCA GCAGGAGCG TTATTGCTTTTATTG TERM 461 544234 - 544253 + G 75 -10 -2.99687 | overlap 544233 AGTTATTTTATTGGT GTTCCTGC ACCA GCAGGAGC GTTATTGCTTTTATT pssA 543763 - 544602 + | phosphatidylserine synthase BQ04420 545424 - 544675 - | oxidoreductase purF 546960 - 545428 - | amidophosphoribosyltransferase TERM 462 546032 - 546018 - G 72 -10 -2.59447 | opp_overlap 546017 546018 546020, overlap 546017 546015 546020 CGGGAACCACAACAT CACCCT CAC AGGGTG CTTCTTGTGCCAAAT TERM 463 546018 - 546032 + g 73 -10 -2.87325 | opp_overlap 546018 546017 546015 546020, overlap 546017 546020 CGGGAACCACAACAT CACCCT CAC AGGGTG CTTCTTGTGCCAAAT cvpA 547579 - 547010 - | colicin v production protein TERM 464 547638 - 547648 + r 93 -3.2 -5.98675 | ATACAAGTGCGTTTC TGGT TAT GCCA TTTTTTATTTTTATA radA 549098 - 547704 - | DNA repair protein RadA TERM 465 548213 - 548227 + g 78 -4.2 -5.29385 | opp_overlap 548213, overlap 548205 CCATTCCTGCAAAAA CAGCAG CTC CTGGTG TTTTTTCATTCCGTT dnaB 550607 - 549105 - | replicative DNA helicase TERM 466 550036 - 550055 + g 72 -3.5 -5.03145 | GAGCGCTTTTTGGCA GCAGTTG CCATAT CAACAGC TTTTTTGACGGCTTC TERM 467 550781 - 550792 + r 76 -4.4 -5.1471 | ATGTATAACTTGTAT GGAA CGTA TTCC TTTATTTTTTATAAT TERM 468 551010 - 551034 + r 87 -6.5 -5.50723 | TCGTATAAGATTCAT CTTTTTGAGAT GCG ATCTCAAACGG TTTTTGTTTTGGTGA TERM 469 551204 - 551172 - R 100 -15.9 -3.28791 | opp_overlap 551177, overlap 551177 AGGTTGTGGTTATAA TAAAATACTCAGCTC CAA AAGCTGAGTATTTTA TGGCATCATATTAAA TERM 470 551177 - 551199 + r 100 -10.7 -4.40804 | opp_overlap 551172 551177 GTGGTTATAATAAAA TACTCAGCT CCAAA AGCTGAGTA TTTTATGGCATCATA TERM 471 551199 - 551177 - R 100 -11.4 -4.77165 | opp_overlap 551177, overlap 551172 GTGGTTATAATAAAA TACTCAGCTC CAA AAGCTGAGTA TTTTATGGCATCATA rplI 551841 - 551260 - | 50S ribosomal protein L9 BQ04480 552846 - 551866 - | hypothetical protein TERM 472 552984 - 552960 - R 100 -12.1 -4.51378 | opp_overlap 552977 552978 552982, overlap 552976 ACCCATATGAGAAAA GCGGCTGGAGA AAA TCCCCAGCTGC AGAGTGCATCTGATA rpsR 553248 - 553000 - | 30S ribosomal protein S18 rpsF 553655 - 553245 - | 30S ribosomal protein S6 TERM 473 553705 - 553746 + H 80 -9.5 -3.66178 | overlap 553706 TTAGCGCAAAGCCTC TGCGACTTGTCTTTTTTGG AAAT CCAAAGAAGAAAGGACGCG TTTACAATTCGAGAC TERM 474 553706 - 553745 + H 81 -10.8 -2.79492 | overlap 553705 TAGCGCAAAGCCTCT GCGACTTGTCTTTTTTGG AAAT CCAAAGAAGAAAGGACGC GTTTACAATTCGAGA BQ04510 554006 - 554593 + | hypothetical protein TERM 475 554992 - 555012 + G 71 -6.1 -4.15106 | CTGTTGGTACATTTA GTCTTACTG ATA CGGCAAGAC TTTTGCGAATTCGTG fabD 554670 - 555614 + | acyl-carrier-protein S-malonyltransferase TERM 476 556241 - 556231 - g 79 -6.8 -4.62313 | opp_overlap 556231 GAAAAGCAAAAAGAA GCCA TTA TGGC TGTGATTCCAATGAA fabG 555634 - 556371 + | 3-ketoacyl-(acyl-carrier-protein) reductase TERM 477 556510 - 556522 + F 70 -4.1 -4.7629 | TCATTTTGTAAGGGA TATCC ACA GGATG TTTTTAAATTGCTGC acpP 556634 - 556870 + | acyl carrier protein TERM 478 557653 - 557665 + G 77 -10.5 -3.37464 | overlap 557656 ATGATGATCCTGAAC GGGCG TCA CGCCC TTATGACGTTGATCG fabF1 556980 - 558242 + | 3-oxoacyl-(acyl carrier protein) synthase II TERM 479 558656 - 558672 + G 86 -7.3 -5.03994 | TGAAAAAAATGGTCT CATTCGA TCA TCGGATG TTTTTGTCTATGCAG BQ04560 558345 - 559454 + | hypothetical protein TERM 480 559819 - 559831 + G 70 -7.7 -3.69323 | opp_overlap 559819 GAACTTTACGTAAAA GCGTT GAA AACGC TTTAAGTGCTGGTCG TERM 481 559831 - 559819 - g 77 -7.7 -4.19704 | opp_overlap 559819 GAACTTTACGTAAAA GCGTT GAA AACGC TTTAAGTGCTGGTCG gmk 559524 - 560189 + | guanylate kinase ksgA 561068 - 560238 - | dimethyladenosine transferase TERM 482 560522 - 560512 - G 70 -5.4 -4.3586 | GGAGGCACATCAAAA GCAA TTT TTGC AGTGGTACGCCATCC pdxA 562072 - 561059 - | 4-hydroxythreonine-4-phosphate dehydrogenase TERM 483 561134 - 561123 - G 72 -4.4 -4.74215 | opp_overlap 561128 AGAGCAGCAATAAAA CTCT CGGG AGAG GCTATCCCTTTATCA TERM 484 562006 - 561977 - G 95 -13.1 -3.64564 | gap 1, opp_overlap 561975 561974, overlap 561975 GATAAGAACGAAAGA TGGAATTTGACGTG TAA CACG-CAAATTCCA AGCCTTTATAGCTAT BQ04600 563046 - 562072 - | hypothetical protein TERM 485 562823 - 562837 + g 79 -5.7 -4.86902 | overlap 562814 TTTTTAGCTTGCGCA GCAAG ATTGC CTTGC TTTTGTTGTAATTTG BQ04610 565504 - 563132 - | hypothetical protein TERM 486 564173 - 564157 - G 73 -7.3 -4.06384 | CTGCAATACCAGAAA GCCTAAC AGC GTTAAGC GGATGTCCGTTCCAG BQ04620 566599 - 565505 - | hypothetical protein TERM 487 566307 - 566297 - G 71 -6.8 -3.98214 | AGCAGGCATGAGAAA CTGC CAC GCAG AAACACCAATTGAAC BQ04630 567786 - 566596 - | hypothetical protein TERM 488 567251 - 567236 - G 100 -3.2 -6.17268 | overlap 567237 GCATAATAAAAAAAA TCGATC TTAG GATCGC GCTGATCGGCAATGA TERM 489 567250 - 567237 - G 73 -6.7 -4.27921 | overlap 567236 CATAATAAAAAAAAT CGATC TTAG GATCG CGCTGATCGGCAATG TERM 490 567833 - 567821 - H 73 -4.1 -4.86621 | ATCTTTAATTAAAAA GCAGA TAT TCTAC ACTACCTAGGTTAAA TERM 491 568028 - 568038 + H 91 -5.4 -5.82281 | opp_overlap 568028 TTTAATTTAAAGAAT GACA ACT TGTC TTTTTTTCTGTCTTT TERM 492 568449 - 568471 + G 71 -6.2 -4.20749 | opp_overlap 568450, overlap 568450 TAATGATTCGAAGAT ACGCTTTCTC ATA GAGGGAGCGA TTTGTTCGGATATTG TERM 493 568450 - 568470 + G 73 -9.7 -3.11726 | opp_overlap 568450, overlap 568449 AATGATTCGAAGATA CGCTTTCTC ATA GAGGGAGCG ATTTGTTCGGATATT BQ04640 568177 - 568638 + | DNA polymerase III subunit chi TERM 494 568948 - 568958 + G 78 -4 -5.25154 | opp_overlap 568948 CTCTTATATTGACAA TATC GTG GATA TTTTGTTCTTTTTTT TERM 495 569060 - 569039 - g 82 -8.7 -4.19735 | TCTTTGAAAATGAAA CTGGCAGCA TTTA TGCCACCAG CATTCATTTTATTTT BQ04650 568829 - 569092 + | hypothetical protein yhjE 570408 - 569089 - | transport protein TERM 496 569229 - 569213 - G 70 -8 -3.66288 | overlap 569188 569186 TATTCTGCAATATAA GGTGCA AGAGA TGCACC TACGATACCAGACAA TERM 497 569803 - 569789 - G 80 -6.4 -4.68384 | ACTGATGCAATAAAA GGAATG CGC CATCCC CATGCTAAAAGTTCA TERM 498 570960 - 570986 + H 84 -6.6 -5.11836 | overlap 570961 570963 570964 CAAACTGGATTTAAG TTTTTGGGCATT AAT AATGCCCAGTAG TTTTCTTTTAAATGT TERM 499 570961 - 570985 + H 71 -7.9 -3.65475 | overlap 570960 570963 570964 AAACTGGATTTAAGT TTTTGGGCATT AAT AATGCCCAGTA GTTTTCTTTTAAATG TERM 500 570963 - 570983 + H 85 -10.5 -3.38754 | overlap 570961 570960 570964 ACTGGATTTAAGTTT TTGGGCATT AAT AATGCCCAG TAGTTTTCTTTTAAA TERM 501 570964 - 570982 + H 84 -11.8 -2.62168 | overlap 570963 570961 570960 CTGGATTTAAGTTTT TGGGCATT AAT AATGCCCA GTAGTTTTCTTTTAA TERM 502 571291 - 571281 - H 74 -5.4 -4.72188 | TTAATCTAAAATAAA CTAC TTA GTAG TCGCGGAGTCGCGGG TERM 503 571540 - 571524 - g 70 -9.5 -2.66249 | overlap 571523 571526 TCCCAGCAATAATAT TACCATC AGC GATGGTA GCGTAGAGATTATTG TERM 504 571627 - 571607 - g 80 -6.1 -4.66535 | overlap 571609 AAGGCGGAAAACAAA TAGTTACGC GTG GCGCAACTG CAATAGGGACTAAAA TERM 505 571625 - 571609 - g 77 -8.7 -3.93868 | overlap 571607 GGCGGAAAACAAATA GTTACGC GTG GCGCAAC TGCAATAGGGACTAA TERM 506 572117 - 572107 - g 71 -4 -4.85918 | GATCATACAACAAAA GAAA AGC TTTC TGTGACGGGAAGAAG BQ04680 571342 - 573933 + | hypothetical protein ndk 574324 - 574746 + | nucleoside diphosphate kinase TERM 507 574796 - 574774 - T 91 -5.6 -5.79588 | opp_overlap 574775, overlap 574775 574776 TGAAAAGCAAAAAAA TTCCCAAACA TAT TGTTTAGGGA TTTTTCTTATGAAGT TERM 508 574775 - 574796 + T 84 -6.7 -5.19328 | gap 1, opp_overlap 574774 574775 574776 GAAAAGCAAAAAAAT TCCC-AAACA TAT TGTTTAGGGA TTTTTCTTATGAAGT pgsA 575432 - 574851 - | CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase uvrC 577543 - 575507 - | excinuclease ABC subunit C TERM 509 575642 - 575654 + g 70 -2.7 -5.01811 | CAATGCGCGCTTTCT TGTTG AAC CAATA TTTTTAATTTCATCA BQ04720 578785 - 577943 - | hypothetical protein TERM 510 578663 - 578650 - G 70 -8.1 -3.69902 | AGGAAAGATCGTAAA TGCCG ATAC CGGCA TGCGTATCTATAACA TERM 511 578812 - 578823 + H 83 -5.8 -5.08601 | opp_overlap 578811 ACCATATTTATAACT GCTC ACCA GAGC TTTTTATTAACATGA TERM 512 579055 - 579044 - H 85 -4.4 -5.72616 | opp_overlap 579047 AGGGATACAAAAAAA CTTC AATT GAAG CATTTGGTATATTGT TERM 513 579593 - 579578 - H 76 -4 -5.30189 | overlap 579579 GAGAAGATGAAAAAA CGTTCA TTGT TGAACA TAAACCTTGGGCTTT TERM 514 579876 - 579891 + H 73 -7.6 -3.78679 | opp_overlap 579875 579876 TTGATTTAATGAAAT TTGGCA TTAA TGCCAA TTGTCTTCCTGTTTT TERM 515 580072 - 580082 + H 74 -6.8 -4.2803 | CATGGACGAGCGCTT TGCG GTA CGCA TTTTAAATTAGCATG tatA 580782 - 581093 + | hypothetical protein tatB 581159 - 581599 + | hypothetical protein tatC 581596 - 582387 + | Sec-independent protein translocase component TERM 516 582379 - 582366 - f 82 -3.1 -5.65678 | overlap 582357 582367 AGAAAAGAGAAAAAA TCCTC TTAA GAGAA GTTTATAACTTGTGC serS 582435 - 583712 + | seryl-tRNA synthetase pcm 583846 - 584505 + | protein-L-isoaspartate O-methyltransferase BQ04790 584674 - 585849 + | antigen (virulence determinant) (lipoptrotein) BQ04800 586249 - 586701 + | hypothetical protein BQ04810 587227 - 587613 + | Outer membrane protein BQ04820 587610 - 588470 + | hypothetical protein TERM 517 588903 - 588887 - T 86 -10.9 -3.18065 | opp_overlap 588883 ATGATAGACACTTAA TGGTCCA GCT TGGACCA ACAATATTTTTTATA TERM 518 589080 - 589093 + T 70 -2.4 -5.26875 | opp_overlap 589080 589073 AAATGAGATAAAGAA GCAA ATTGCC TTGC TTTTTTACTTGCAGG TERM 519 589102 - 589125 + T 74 -5.3 -4.68384 | GCCTTGCTTTTTTAC TTGCAGGCA AAGTGC TGACTGCAA TTTTATTAAATAAAT ppiD 591053 - 589164 - | peptidyl-prolyl cis-trans isomerase protein TERM 520 591125 - 591142 + H 80 -4.9 -5.22137 | gap 1 AAAGATGCGTAAGAT GCAAG-CT TAA AGACTTGC TTTTGTTTTATAATT TERM 521 591340 - 591354 + G 70 -5.7 -4.41206 | TTGAAGCACTTATTT GCGTT CCAGC AACGC TTTTATCGCGTGCTT tpiA 591207 - 591971 + | triosephosphate isomerase secG 592053 - 592508 + | preprotein translocase subunit SecG TERM 522 592498 - 592508 + F 77 -5.4 -5.00884 | CAGTCCCTGGTAGTG CTAC AAA GTAG TTTTTTCAAGAGAGT TERM 523 593391 - 593363 - g 81 -11.9 -2.75535 | opp_overlap 593372 TGAATATGCCAACGA TTTATGATGTGCC TAT GGCATATCATAAA GAAGGGTTAGACTCA pyrG 592636 - 594264 + | CTP synthetase TERM 524 594631 - 594653 + G 76 -2 -5.39721 | overlap 594630 GCTGTTGGTTCAGTG GTAGATGTTT TAC AAATACCTGC TTTTTTATGTCGTCA kdsA 594301 - 595137 + | 2-dehydro-3-deoxyphosphooctonate aldolase eno 595210 - 596478 + | enolase BQ04890 596587 - 596991 + | hypothetical protein BQ04900 597188 - 597517 + | hypothetical protein pdhA 597646 - 598686 + | pyruvate dehydrogenase E1 component, alpha subunit TERM 525 599617 - 599646 + G 74 -3.7 -5.11836 | gap 1, opp_overlap 599624 TGAAATTTTGTATGG TTATCAATTTGAGG TTC CC-CAAATAGATGA TTTTATTTTGCCTAT pdhB 598703 - 600067 + | pyruvate dehydrogenase subunit beta pdhC 600082 - 601401 + | branched-chain alpha-keto acid dehydrogenase subunit E2 pdhD2 601625 - 603085 + | dihydrolipoamide dehydrogenase lipA 603161 - 604123 + | lipoyl synthase BQ04960 604126 - 604587 + | hypothetical protein cinA 605174 - 604686 - | competence /damage-inducible protein cinA ispDF 606346 - 605171 - | IspD/ispF bifunctional enzyme TERM 526 605635 - 605613 - G 73 -7.8 -3.85527 | overlap 605608 CATAATATAAGAGAA GTTCCTTCTT CGA AAGAATGAAC ATCATAACCATTTCC TERM 527 606263 - 606289 + g 76 -6.6 -4.32905 | opp_overlap 606265, overlap 606259 606265 CACGGTGTGACAAAT AACCGGCTTTTG TCC TAAAAGTCGGTA TTGTTTTGGATTTTT TERM 528 606265 - 606287 + g 76 -9.2 -3.73132 | opp_overlap 606265, overlap 606263 606259 CGGTGTGACAAATAA CCGGCTTTTG TCC TAAAAGTCGG TATTGTTTTGGATTT rirA 606858 - 606412 - | iron-responsive transcriptional regulator TERM 529 607631 - 607641 + G 72 -3.2 -5.14645 | CTATCGGACGCAATT TGCG TGG TGCA TTTTTGTTAAGTTCT ntrY 607036 - 609300 + | nitrogen regulation protein ntrX 609302 - 610660 + | nitrogen regulation protein trkA 610664 - 612040 + | potassium transporter peripheral membrane component TERM 530 612195 - 612179 - f 70 -2.1 -5.31877 | opp_overlap 612180 612181, overlap 612180 612181 AGTTATGATAAAAAA GTGGGCA ATC TGCCCGT TGGTGTTGAATTGCA TERM 531 612193 - 612181 - f 73 -9.1 -2.86102 | opp_overlap 612180 612181, overlap 612180 612179 TTATGATAAAAAAGT GGGCA ATC TGCCC GTTGGTGTTGAATTG TERM 532 612181 - 612193 + F 72 -9.1 -2.63236 | opp_overlap 612181 612180 612179, overlap 612180 TTATGATAAAAAAGT GGGCA ATC TGCCC GTTGGTGTTGAATTG clpP 613016 - 613648 + | ATP-dependent Clp protease proteolytic subunit TERM 533 613933 - 613967 + G 70 -8.1 -3.68506 | TAAGCTTATCGCGGG GC-CTACTGTATTCATC TGT GATGAATGC-GTAGAGC TTTGCATGGATATTA clpX 613835 - 615109 + | ATP-dependent protease ATP-binding subunit TERM 534 615761 - 615750 - g 85 -3 -5.80364 | AGCTTAATAAAAAAA TTTC TCCT GAAA TCGTCAATGCGATTA TERM 535 615895 - 615917 + G 80 -7.8 -4.45168 | TCGCCTTGAACGTGT TCTTTCTTTC ATG GAAGGAGAGA TTTCTGTTTTGCAGG TERM 536 617019 - 617003 - g 84 -8.1 -4.79667 | AAAACGCAGCAAAAA TCTGTAA AGA TTACAGA AAATAATATTAATGA lon1 615293 - 617716 + | ATP-dependent protease lon TERM 537 618032 - 618048 + G 72 -8.7 -3.59979 | opp_overlap 618044 ATCGATGCTTTTATC GCTTCTG TAA CAGAGGC TTTGGCGTCAGGGGG hupB 617945 - 618223 + | DNA-binding protein TERM 538 618263 - 618243 - T 84 -6.2 -5.22312 | gap 1, opp_overlap 618244, overlap 618244 AGCTACACTAAAAAA CCCAGCTTA ATTA TAAGC-GGG TTTTTTTACATGCTT TERM 539 618244 - 618263 + T 87 -6.4 -5.49729 | opp_overlap 618243 618244 GCTACACTAAAAAAC CCAGCTTA ATTA TAAGCGGG TTTTTTTACATGCTT TERM 540 619570 - 619588 + T 73 -3.9 -5.055 | gap 1, opp_overlap 619552 619551 619572 GATTGGGGCAGTAAG CACCC-AT CAAA ATAGGGTG TTTTTTCAAAGTTAC TERM 541 620690 - 620665 - T 73 -7.7 -3.86015 | gap 1, overlap 620668 GATTTGTTTGATAAA GAGGGGCATTTT TTA AAAACGCCC-TC AGAGTTTAAATGACA TERM 542 620688 - 620668 - T 78 -10.5 -2.70946 | overlap 620665 TTGTTTGATAAAGAG GGGCATTTT TTA AAAACGCCC TCAGAGTTTAAATGA TERM 543 623132 - 623148 + T 78 -2.3 -5.71712 | opp_overlap 623135, overlap 623135 AAATTCATATATTGC AAAGTAA TTA TTACTTG TTTTTTTATCTCAAC TERM 544 623135 - 623145 + T 70 -4 -4.92669 | opp_overlap 623135, overlap 623132 TTCATATATTGCAAA GTAA TTA TTAC TTGTTTTTTTATCTC TERM 545 625334 - 625345 + T 75 -7.2 -4.09739 | opp_overlap 625329 625334 GTGCGTATAATCATA GGGG AAAA CCCC TTTTAAAAAACTTAA TERM 546 627125 - 627137 + T 76 -6.3 -4.56597 | TGGCAAATTCACTAG CACTT TAG AAGTG TTTTTCACAACAGGA BQ05210 627818 - 627456 - | response regulator BQ05220 629372 - 628461 - | lysophospholipase l2 ibpA2 629647 - 630153 + | small heat shock protein TERM 547 630182 - 630201 + F 100 -13.6 -5.34632 | opp_overlap 630182 630179 630178 TAAAGAATAAAGTGA CGCGAGAC AAAG GTCTCGCG TTTTTATGTTTTATT TERM 548 630201 - 630182 - f 89 -13.6 -2.82317 | opp_overlap 630182, overlap 630179 630178 TAAAGAATAAAGTGA CGCGAGAC AAAG GTCTCGCG TTTTTATGTTTTATT TERM 549 630939 - 630926 - f 79 -5.3 -5.02231 | opp_overlap 630920 630926, overlap 630920 CAAAAACAGCAAAAA TCCAA ATTT TTGGA TATGTGGTTTTTGCT BQ05250 631076 - 631450 + | hypothetical protein TERM 550 631480 - 631495 + T 83 -6.2 -5.17576 | ATTACATTTAGTGAG TCAAGA ATTT TCTTGA TTTTTTAGGTTGATC TERM 551 631935 - 631949 + T 83 -5 -5.4756 | ATTGGTTGGTAAGCT TACTTC TTC GGAGTA TTTTTTGTTCAGCTT BQ05270 633299 - 632370 - | lipid A biosynthesis lauroyl acyltransferase TERM 552 632719 - 632768 + g 72 -8.7 -3.58536 | gap 1, overlap 632719 632728 632750 GTGGCTAATGCCCAA GCTGCACCAGCTTTGGATGGGACG AGA TGTCCCAT-TAAAGCTTGTCGAGC TTTAAGGATGCGTTT TERM 553 632728 - 632759 + g 75 -9.6 -3.3506 | gap 1, overlap 632719 632719 632750 GCCCAAGCTGCACCA GCTTTGGATGGGACG AGA TGTCCCAT-TAAAGC TTGTCGAGCTTTAAG TERM 554 632885 - 632910 + g 76 -3.5 -5.24989 | TTCCGGTATGGGCTG TGAAAAAAA TGTGCGGT TTTTTTTCA TTTTTTAATCTCTCA adh 634334 - 633306 - | alcohol dehydrogenase (quinone oxidoreductase) TERM 555 633716 - 633727 + g 80 -4.4 -5.21709 | CCGCTCCAAGAGATT TTGC TTTT GCAA TTTTTTCATCTGAAC fabF2 635670 - 634396 - | 3-oxoacyl-(acyl carrier protein) synthase II TERM 556 634692 - 634702 + g 75 -5.4 -4.67641 | CTGTTGATAATGCGA GATG CTC CATC TTTTCATTTTCAGGT TERM 557 635180 - 635190 + g 74 -4 -5.08088 | GTAACGGGAAGTCCC TTTG TTC CAAA TTTTTCTTGAAGCTT TERM 558 635383 - 635371 - G 74 -4.9 -4.68994 | AGGAGCAGCTAAAAA TAATG GCC CATTA AAATTCTTTTTATCA fabF3 636860 - 635685 - | 3-oxoacyl-(acyl carrier protein) synthase II TERM 559 635789 - 635805 + g 79 -3.6 -5.41143 | opp_overlap 635790, overlap 635790 TTTCATGAGCACTTA ACGCTG GAAAA CAGCGC TTTTTTTCAACAGTA TERM 560 635790 - 635804 + g 71 -7.1 -3.83963 | opp_overlap 635790, overlap 635789 TTCATGAGCACTTAA CGCTG GAAAA CAGCG CTTTTTTTCAACAGT TERM 561 635864 - 635850 - G 75 -5.6 -4.66535 | overlap 635824 635851 AAGTGCTAAAAGAAA TTGCGC CTC GCGCAT ATAACCAAATAATGT TERM 562 635863 - 635851 - G 72 -9.1 -3.38836 | overlap 635824 635850 AGTGCTAAAAGAAAT TGCGC CTC GCGCA TATAACCAAATAATG acpP2 637155 - 636871 - | acyl carrier protein BQ05320 639668 - 637359 - | malic enzyme TERM 563 638238 - 638254 + g 73 -8.1 -3.96148 | GAGAGGAATCGCTGT TTGTTCT TCA AGAACAA TTTGTGCTGCACGAA TERM 564 640589 - 640638 + r 90 -11.1 -3.72695 | opp_overlap 640603, overlap 640591 640603 AGCGATGAATACCAT TGGAAAAAGAAAAAGTGGAAAAA AATC TTTTTCCACTTTTTTATTATCTA TTTGATACGGCCACT TERM 565 640591 - 640636 + r 89 -11.5 -3.44848 | opp_overlap 640603, overlap 640589 640603 CGATGAATACCATTG GAAAAAGAAAAAGTGGAAAAA AATC TTTTTCCACTTTTTTATTATC TATTTGATACGGCCA TERM 566 640603 - 640624 + r 100 -10.3 -5.62045 | opp_overlap 640603, overlap 640591 640589 TTGGAAAAAGAAAAA GTGGAAAAA AATC TTTTTCCAC TTTTTTATTATCTAT TERM 567 640624 - 640603 - R 100 -10.3 -5.61881 | opp_overlap 640591 640589 640603 TTGGAAAAAGAAAAA GTGGAAAAA AATC TTTTTCCAC TTTTTTATTATCTAT BQ05330 645201 - 640636 - | hypothetical protein TERM 568 644070 - 644086 + g 85 -3.7 -5.58454 | opp_overlap 644057, overlap 644057 644052 AGTTTTTCCCTAATT CATGGAA AAA TTCTGTG TTTTTTTGCTGTACC hfq 645925 - 646164 + | RNA-binding protein Hfq hflX 646226 - 647569 + | GTP-binding protein hflX TERM 569 647942 - 647966 + G 76 -2.1 -5.50723 | TTTCACAGCCCATAC TTTTGCATGAT TCA AGCTTGCAGAA TTTTTCTTTTAATGC BQ05360 647713 - 649479 + | hypothetical protein BQ05370 649636 - 650712 + | cytochrome c oxidase assembly protein argC 651669 - 650734 - | N-acetyl-gamma-glutamyl-phosphate reductase TERM 570 651900 - 651871 - H 79 -3.6 -5.45726 | overlap 651873 TAGATGGCAAAAAAA TCTGCCTCAATC GCCAAT GAATAAGGCAAA TCTTTGTTATATTTT TERM 571 652722 - 652744 + G 77 -8.4 -3.92324 | opp_overlap 652723, overlap 652723 652725 ACTACAACGCATAAA TCGCTACGAG GTC CTCGTGGTGG TTTGATATTGACAAA TERM 572 652723 - 652743 + G 72 -9.7 -2.95073 | opp_overlap 652723, overlap 652722 652725 CTACAACGCATAAAT CGCTACGAG GTC CTCGTGGTG GTTTGATATTGACAA glyA 652005 - 653318 + | serine hydroxymethyltransferase BQ05400 653334 - 653816 + | transcriptional regulator NrdR ribD 653839 - 654936 + | riboflavin biosynthesis protein ribD ribE 654918 - 655538 + | riboflavin synthase subunit alpha ribH 655618 - 656076 + | riboflavin synthase subunit beta TERM 573 656132 - 656102 - g 74 -9.1 -3.56486 | overlap 656100 TATAAAAGGCAAATA TTCTCCACGTTTA GCCAA TAAACGCGGAGCA GCAAGACTGGCTGCA nusB 656079 - 656549 + | transcription antitermination protein NusB BQ05450 657096 - 656617 - | hypothetical protein TERM 574 657605 - 657624 + G 100 -3.6 -6.13503 | opp_overlap 657602 GCGACTAGAAAATAT TCTCGATG AAAA TATTGAGA TTTTTTTTGTTCCTG TERM 575 657678 - 657667 - g 70 -3 -5.0925 | TGGTAAAACCAAAAA TATC AGAA GATA CAAATGAACTGTTTT BQ05460 657333 - 657890 + | hypothetical protein TERM 576 658124 - 658144 + G 71 -4.1 -4.94487 | opp_overlap 658128, overlap 658128 AGCAGCAATTGTACA AAAACATTT GCC AAATGTTTA TTTTCTGTTTTATGG TERM 577 658140 - 658128 - g 77 -4.9 -4.87786 | opp_overlap 658128 658124 GCAATTGTACAAAAA CATTT GCC AAATG TTTATTTTCTGTTTT TERM 578 658128 - 658140 + G 77 -4.9 -4.93812 | opp_overlap 658128, overlap 658124 GCAATTGTACAAAAA CATTT GCC AAATG TTTATTTTCTGTTTT TERM 579 658579 - 658569 - g 75 -5.4 -4.7173 | TATCACACTGAAAAA CCAA GTG TTGG GCTTTTAAATGTGGG TERM 580 658784 - 658765 - g 73 -5.6 -4.57837 | overlap 658766 ATATCGCTTTAAAAA CCGCAGAG GGGA CTGCGCGG CAGATAGGGGAAATC TERM 581 658807 - 658819 + G 74 -4.8 -4.74611 | opp_overlap 658806, overlap 658806 GGGAAATCTTAAACG CTGC TATGC GCAG TTCTTTTTTCTCATC plsX 658047 - 659120 + | putative glycerol-3-phosphate acyltransferase PlsX TERM 582 659625 - 659635 + G 70 -3.2 -4.87803 | AGATTGGAAAGATCG CACG ACA TGTG TTTTGTTTGGCGATG fabH 659170 - 660144 + | 3-oxoacyl-(acyl carrier protein) synthase III ihfA 660222 - 660536 + | integration host factor subunit alpha BQ05500 660744 - 661247 + | hypothetical protein thrS 663269 - 661293 - | threonyl-tRNA synthetase TERM 583 661449 - 661480 + g 71 -5.2 -4.59117 | opp_overlap 661449 ACCACATACCAAAAT TACGGGAACTTTTT GTAA AGAATGTTCGCGTA TTTTATAATTAATTT BQ05520 663743 - 663390 - | hypothetical protein BQ05530 664172 - 663744 - | hypothetical protein folE 664298 - 664918 + | GTP cyclohydrolase I TERM 584 665746 - 665764 + G 72 -3.2 -5.14163 | opp_overlap 665746 665740, overlap 665740 GAAAAAAAGTCAAAA GGAAAA AGAGAAA TTTTCC TTTTTATTCATGGCT BQ05560 665437 - 666507 + | hypothetical protein BQ05570 666647 - 667141 + | hypothetical protein TERM 585 668435 - 668419 - f 70 -2.3 -5.25735 | overlap 668433 GGAAAAAATGAAAAA TTGTGAT AGA ATCAGAA CAAATATTTATTCTC nuoA 669578 - 669943 + | NADH dehydrogenase subunit A TERM 586 670513 - 670487 - g 80 -2.2 -5.60993 | overlap 670488 TGTTGCAGAAAAAAA TCCGTCGTACTG GAT CAATAGAACGGT AGGGAGTCTTTGTTG nuoB 669934 - 670515 + | NADH dehydrogenase subunit B TERM 587 670975 - 670987 + G 77 -7.7 -4.20783 | TTTACGCAAAGATTT TCCTG TAA CAGGA TTTGTTGAATGCCGT nuoC 670532 - 671140 + | NADH dehydrogenase subunit C nuoD 671263 - 672453 + | NADH dehydrogenase subunit D TERM 588 672821 - 672811 - g 85 -4 -5.60993 | opp_overlap 672811 TTTGTCAGAAAAAAA TTCA TAA TGAA CCTTTTGTTACCAAT nuoE 672453 - 673103 + | NADH dehydrogenase subunit E TERM 589 673128 - 673147 + F 71 -3 -5.093 | overlap 673130 GGGAATGTAGCTAGG TGTTTTTT CTTG AAAAAATA TTTTATTATTTTGCC nuoF 673270 - 674577 + | NADH dehydrogenase I subunit F TERM 590 676182 - 676200 + G 70 -3.2 -4.90869 | GATTGTGAATATTCT TAAAACCT GTG AAGTTTTA TTTTTGCTTGGTGCT nuoG 674641 - 676710 + | NADH dehydrogenase subunit G nuoH 676733 - 677779 + | NADH dehydrogenase subunit H nuoI 677794 - 678285 + | NADH dehydrogenase subunit I nuoJ 678386 - 679006 + | NADH dehydrogenase subunit J TERM 591 679164 - 679174 + G 72 -3.2 -5.04385 | ATCTCAATTTTGTTG CGTT TTC AGCG TTTTTTCAGGATCTC nuoK 679016 - 679324 + | NADH dehydrogenase subunit K TERM 592 679727 - 679741 + G 70 -2.8 -5.08824 | opp_overlap 679729, overlap 679729 TTGGTGACATCCAAT AATCTG ATA CAGATG TTTTTTGGATGGGAA TERM 593 679865 - 679877 + G 70 -2.7 -5.02231 | GTTGGAGATTTTGGT TTTCT CTT AGGAA TTTTTAGTATTTTTG nuoL 679331 - 681295 + | NADH dehydrogenase subunit L nuoM 681295 - 682764 + | NADH dehydrogenase subunit M nuoN 682783 - 684237 + | NADH dehydrogenase subunit N TERM 594 684288 - 684276 - g 70 -3.3 -4.83615 | opp_overlap 684276 GATTTTGCACAAAAA CAGGG CTA CGCTG TTGAATCCTACGAAA TERM 595 684317 - 684305 - g 71 -6.3 -4.28361 | opp_overlap 684304 TGAATCCTACGAAAA TGTTG ATT CAACA AATCTTATTGCTCAG birA 684237 - 685046 + | biotin-protein ligase birA BQ05790 685094 - 686770 + | hypothetical protein TERM 596 687518 - 687542 + G 73 -2.1 -5.29716 | AAACATCTTATAATC GTATGTTTGTA GCT TACTTACGTAC TTTTTCTTGTCTTGG TERM 597 687894 - 687873 - g 83 -9.5 -3.79419 | opp_overlap 687872 687873, overlap 687871 CTTTGGTACAAAATA TTCTGCTCC GATG GGAGCAAAA GTTATGGGACAAGAT proS 686992 - 688317 + | prolyl-tRNA synthetase TERM 598 689109 - 689135 + G 84 -2.3 -5.82388 | gap 1, overlap 689111 TCAACAAGTCTATTT GATTGATTGGCG GATG CGC-AATCAGGC TTTTTTTTCAGCTTT lolC 688333 - 689601 + | lipoprotein releasing system transmembrane protein lolC lolD 689601 - 690281 + | lipoprotein releasing system ATP-binding protein lolD BQ05830 690358 - 690648 + | hypothetical protein TERM 599 691498 - 691512 + G 85 -8.6 -4.41633 | overlap 691494 GTTTTTTTGATCATT GTGGTA ATT TACCAC TTGTTTTTGAACATC TERM 600 691800 - 691790 - g 70 -8.2 -3.6543 | opp_overlap 691798 TAATTTTGTAAAAGA GCGC AAT GCGC AAGAGAAAAATGTTT TERM 601 692399 - 692385 - g 70 -2.9 -5.11613 | ACACGACTCAAAAAA CATTT ATTGG AAATG GCTGGCCAATTGATC TERM 602 692418 - 692452 + G 73 -5.6 -4.63486 | opp_overlap 692421, overlap 692419 692421 692421 GGCCAATTGATCCAT ATAGCTGCAGAGCGTG CCA CGCGTTCTGCGCCTGC TTTTGTTCCACCAAT TERM 603 692419 - 692451 + G 72 -9.1 -3.3761 | opp_overlap 692421, overlap 692418 692421 692421 GCCAATTGATCCATA TAGCTGCAGAGCGTG CCA CGCGTTCTGCGCCTG CTTTTGTTCCACCAA TERM 604 692421 - 692449 + G 73 -9.5 -3.25538 | opp_overlap 692421, overlap 692421 692419 692418 CAATTGATCCATATA GCTGCAGAGCGTG CCA CGCGTTCTGCGCC TGCTTTTGTTCCACC TERM 605 692421 - 692448 + G 76 -10.6 -2.54841 | gap 1, opp_overlap 692421, overlap 692419 692418 692421 CAATTGATCCATATA GCTGCAGAGCGTG CCA CGCGTTCTGC-GC CTGCTTTTGTTCCAC TERM 606 692667 - 692683 + G 86 -9.5 -4.05788 | GGATATCAGGTTGCT GTTGTTG TGC CAACAAC TTTGCTTTCACGACA TERM 607 693433 - 693444 + G 79 -5.8 -4.83759 | opp_overlap 693433 693432 GGCGCTCAAAACAAC GTGC TTAC GCAC TTTTTACATTTCCTT mfd 690654 - 694154 + | transcription repair coupling factor TERM 608 694188 - 694216 + F 79 -5.5 -5.14682 | overlap 694190 TTCAAAGCTATCACT CATTTTTATAGAA TTA TTCTATAGAAATA TTTTATTTGTTGTGC TERM 609 694190 - 694214 + F 81 -8.1 -4.18024 | overlap 694188 CAAAGCTATCACTCA TTTTTATAGAA TTA TTCTATAGAAA TATTTTATTTGTTGT TERM 610 694918 - 694930 + F 82 -4.1 -5.39905 | CCGGATCAAGATAGG GTGCT AAA AGTAC TTTTTCTTCTTTGGT BQ05860 696395 - 697006 + | hypothetical protein TERM 611 697086 - 697065 - T 77 -8.7 -3.64703 | opp_overlap 697065 GTTTTTCTATTTAAA CCGCCATAA ATAT TTGTGGCGG TTTTTTTTATACTTA TERM 612 697065 - 697086 + T 100 -10.9 -6.02345 | opp_overlap 697065 GTTTTTCTATTTAAA CCGCCATAA ATAT TTGTGGCGG TTTTTTTTATACTTA rne 699726 - 697099 - | ribonuclease E TERM 613 699547 - 699527 - G 74 -3.9 -5.15117 | opp_overlap 699530, overlap 699528 699530 GAAAATGTCAAAAAA CCATGGCGG TTG CCACCATAT TCGACAAAAGCCGCT amiB 700330 - 701559 + | N-acetylmuramoyl-l-alanine amidase TERM 614 702837 - 702823 - g 76 -7.2 -4.23391 | GAAATAAAGTAGAAA TTGGTT TAC AACCAA AGCGCGAAGCTCCAG mrcA2 701730 - 704192 + | penicillin-binding protein 1a prfB 704542 - 705510 + | peptide chain release factor 2 bcp 706147 - 705665 - | bacterioferritin comigratory protein tyrS 707647 - 706394 - | tyrosyl-tRNA synthetase TERM 615 707413 - 707451 + g 78 -3.8 -5.24531 | opp_overlap 707438, overlap 707439 GATCACCGATCAATC CTGTTCCTCCACCCAT CAAAGCA ATGGGTCGATGACCGG TTTTTTGTAACCAAT BQ05930 708623 - 707943 - | hypothetical protein TERM 616 708540 - 708552 + g 90 -3.4 -5.88565 | opp_overlap 708540, overlap 708529 AGGATGCAAAATAAT TGCA ATTGG TGCA TTTTTTTGTTGTGAA TERM 617 709311 - 709327 + G 73 -7.3 -4.067 | overlap 709314 AGCTGCTATCGTTCG GAATGCT GGG GGCATTC TTATTGTTGATTTGA nifS1 708796 - 709941 + | nitrogenase cofactor synthesis protein nifS TERM 618 710027 - 710039 + F 76 -7.7 -4.07568 | CCTAGGAAATGGATT GCTTG CTT CAAGC TTTTAAAAACAAGAC TERM 619 711320 - 711308 - g 88 -9.1 -4.63586 | opp_overlap 711307 ATAGCACATAGAAAA GCGCA GAA TGCGC GTAATTTTACGCAAT TERM 620 711543 - 711553 + G 70 -5.4 -4.44667 | opp_overlap 711543 AGGTCATTCAAAAAC TTCC AAT GGAA TTTGTTGTTGAAGCA BQ05950 710099 - 711610 + | cysteine desulfurase activator complex subunit SufB BQ05960 711659 - 712414 + | ATP-dependent transporter TERM 621 712673 - 712693 + G 79 -3.3 -5.47159 | opp_overlap 712690, overlap 712676 712678 AGGAATTTGTCAATG CATTACTTT CAA AAAGTGCTG TTTTTTCTATTAAGA TERM 622 713614 - 713634 + G 83 -12.7 -2.91728 | overlap 713609 GGATTTGTCTCTGAG CTGCTTGAT GAC ATCAAGCAG TATAATATTCAAACT BQ05970 712426 - 713694 + | hypothetical protein nifS2 713705 - 714949 + | nitrogenase cofactor synthesis protein nifS BQ05990 714942 - 715346 + | hypothetical protein TERM 623 715718 - 715728 + G 89 -5.4 -5.48825 | opp_overlap 715718 ATGTTCCACAAAATG CTAC AGA GTAG TTTTTTTAGATAATC BQ06000 715626 - 715826 + | hypothetical protein BQ06010 716311 - 715985 - | hypothetical protein TERM 624 716027 - 716017 - G 75 -5.4 -4.83169 | AGTCGTCCATAAAAA CACA AAA TGTG CAGATAAAAACACCT TERM 625 716231 - 716243 + g 70 -3.5 -4.83615 | opp_overlap 716230, overlap 716230 AATAGAATGACAGAT TTTTT TTA AAAAA TTTTTCTCACGAATA ubiH 718583 - 717357 - | 2-octaprenyl-6-methoxyphenyl hydroxylase TERM 626 717473 - 717448 - G 73 -5.5 -4.55295 | opp_overlap 717448 TCTCGCATAAATAAA TTACGTAACGG TGAG CAATTACGTAA TAATTCAAGCCCGAG TERM 627 718118 - 718106 - G 70 -7.7 -3.75738 | CATCAGCAGCAATAA CAAGC GAT GCTTG AAGAACTCTACCATT TERM 628 718644 - 718658 + H 76 -4.4 -5.18995 | AAATGAACAATTTCT TTTTAT TGT ATAAAA TTTTTCTATTATATT TERM 629 719207 - 719197 - g 74 -4 -5.08483 | GAAAACCAAAGAAAA CTTT TTT AAAG GATTTCCTGTAGTTT pcsA 718829 - 719530 + | phosphatidylcholine synthase TERM 630 719912 - 719923 + T 91 -4.4 -5.79526 | opp_overlap 719912 TTTGCTATGCCAGAA GCTT CTAC AAGC TTTTTTTTACCATCT TERM 631 720349 - 720368 + T 70 -3.6 -4.91429 | GTCAATAAATATATT GCTATTAA TTAA TTTATAGC TTTTATTTGCGATTT TERM 632 720728 - 720754 + T 84 -6.5 -5.16472 | opp_overlap 720727 720728, overlap 720730 CTGCATTTTTTAAAT TTTCGGGCTAG AATTA CTAGCCCGATC TTTTTTAAAATTTTT TERM 633 720730 - 720752 + T 100 -13.5 -4.18259 | opp_overlap 720728 720727, overlap 720728 GCATTTTTTAAATTT TCGGGCTAG AATTA CTAGCCCGA TCTTTTTTAAAATTT BQ06070 722060 - 721248 - | hypothetical protein BQ06080 722844 - 722071 - | hypothetical protein metG 724393 - 722834 - | methionyl-tRNA synthetase TERM 634 723038 - 723072 + g 71 -6.7 -4.04764 | gap 1, opp_overlap 723040, overlap 723034 723029 723040 TCCTATTCGCCGCAA GATT-TCTACAGTTAT GTAA AGAACTGTAGAAAATC TTTCTGGATTATTTT TERM 635 723069 - 723040 - G 72 -9.5 -3.02144 | opp_overlap 723038 723034 723029 723040 CTATTCGCCGCAAGA TTTCTACAGTTAT GTAA AGAACTGTAGAAA ATCTTTCTGGATTAT TERM 636 723040 - 723069 + g 70 -9.5 -2.74604 | opp_overlap 723040, overlap 723038 723034 723029 CTATTCGCCGCAAGA TTTCTACAGTTAT GTAA AGAACTGTAGAAA ATCTTTCTGGATTAT TERM 637 724142 - 724152 + g 89 -5.4 -5.47218 | opp_overlap 724142 GTTAGAACAATTTAA TGCT GCG AGCA TTTTTTTAAATACAG dnaC 725509 - 724454 - | DNA polymerase III subunit delta' TERM 638 724620 - 724633 + g 86 -2.4 -5.91981 | AAATTCCCTTTTTCA GCTA GCATGA TAGC TTTTTTTTGAATTTT TERM 639 725325 - 725335 + g 73 -6.8 -4.19953 | opp_overlap 725325 725324 CAAGCAAGGTGAAAT GCCA ATG TGGC TTTTCCAATTCCATG tmk 726150 - 725506 - | thymidylate kinase TERM 640 725822 - 725808 - G 70 -5.6 -4.32763 | opp_overlap 725806 725808, overlap 725812 CTAAAACAGAAAGAA CAGAGG AAC CCACTG TATTATTGAGTCCCT dacA1 727344 - 726181 - | penicillin-binding protein rlpA 728700 - 727837 - | rare lipoprotein A TERM 641 727944 - 727962 + g 73 -7.4 -4.06001 | CAGTTTTACTCAGTT GCTTCTGT TTA ACAGCAGC TTTAGTTAGTTTCTC TERM 642 728426 - 728442 + g 83 -5.1 -5.18371 | GTTGGATCATTTTTG GGATAGT ACC ACTTTCC TTTTATTTTGTAAGG lexA 730755 - 731468 + | LexA repressor TERM 643 731483 - 731473 - T 76 -4 -5.32699 | GCAAATATTAAAAAA CAAA AAA TTTG CTTAGCCCGCTCCCT TERM 644 733517 - 733533 + T 71 -6.6 -4.19678 | GCCTGCCGTATATGG CGCAAA AGCTG TTTGCG TTTATTAAACTCTAC rpsD 734564 - 733947 - | 30S ribosomal protein S4 TERM 645 734126 - 734108 - G 73 -6.8 -4.18401 | opp_overlap 734108 734109, overlap 734109 GCACAGATTCCAAAA CCAAAACA AGC TGTTTTGA TTTTTCACGAACCTC murI 735559 - 734747 - | glutamate racemase BQ06210 736388 - 735552 - | RNA methyltransferase TERM 646 736761 - 736771 + G 75 -5.4 -4.74215 | GCAAAACTTATCCGT CGTT ATA AACG TTTTCTTGCTGATGT TERM 647 737191 - 737181 - g 79 -6.8 -4.56358 | opp_overlap 737181 737183 GATACTGAGACAAAA CGTG GCA CACG TCATCTTGAAGAGCT TERM 648 737225 - 737215 - g 71 -4 -4.87273 | AAGAGCTCATAAAAA TTGT GCA ACAA GGAAAACGAGCTGCT sfsA 736719 - 737423 + | sugar fermentation stimulation protein A map 737416 - 738246 + | methionine aminopeptidase TERM 649 738738 - 738762 + G 75 -5.8 -4.80178 | opp_overlap 738747 AAAGCTGTCATGGCT CACGAAAC ACGCGAACA GTTTCGTG TTTTATTCCTTGATA radC 738264 - 739058 + | DNA repair protein radC BQ06250 739442 - 739104 - | hypothetical protein TERM 650 739542 - 739529 - R 87 -2.3 -6.07969 | opp_overlap 739529 CAAAAGTAAAAAAAA CGGGT GGAA AACCG TAAATTTTTAATAAT BQ06260 740724 - 739951 - | hydrolase BQ06270 741239 - 740721 - | hypothetical protein TERM 651 741215 - 741231 + g 73 -8.1 -3.82067 | opp_overlap 741214 CCAACAGAACGAAGC GCTTTTT TTC AAAAAGC TTTAACATTTTTATC BQ06280 742070 - 741495 - | cold shock protein TERM 652 743392 - 743374 - g 72 -3.2 -5.03314 | CTGATCGTGAAAAAA TTGCTA TAGAACT TAGCAA ATTAAAAGATTTTCA livJ 742392 - 743525 + | branched chain amino acid ABC transporter periplasmic ligand-binding protein TERM 653 743778 - 743792 + G 87 -5 -5.40279 | TCACGGCGATATCTT TATGCT GGG GGCATA TTTTGTTTTCTTTTC livH 743656 - 744720 + | branched chain amino acid ABC transporter permease TERM 654 744724 - 744704 - f 76 -2.5 -5.43866 | TAATGGGCAAAAAAA GTCAGGAGA AAA TCTAATGAC AAAATCAGCTTCAAC livM 744720 - 745778 + | high-affinity branched-chain amino acid transporter, permease protein livG 745775 - 746557 + | high-affinity branched-chain amino acid transport, ATP-binding protein livF 746544 - 747254 + | high-affinity branched-chain amino acid transport, ATP-binding protein gatA 749122 - 747632 - | aspartyl/glutamyl-tRNA amidotransferase subunit A gatC 749441 - 749154 - | glutamyl-tRNA (Gln) amidotransferase subunit C TERM 655 749267 - 749291 + g 75 -10.1 -3.07994 | opp_overlap 749267 749266, overlap 749261 749274 749279 CACGCATTCGTAAAG CCATTGGCATC ACT GATGTTAATGG TTCAATGCCATTGAC BQ06360 749587 - 750066 + | hypothetical protein BQ06370 751847 - 750051 - | Acyl-CoA dehydrogenase TERM 656 751156 - 751170 + gF 79 -5.6 -4.87626 | opp_overlap 751150 751156, overlap 751158 TCATCAAAAGCACAA GTCAGC GAA GCTGCC TTTTTCCTATTAACA TERM 657 751955 - 751944 - gH 75 -3 -5.35222 | overlap 751948 751949 AAAATTGATAAAAAA CAAT CTCC ATTG CATGGATGCACTCAA pyrB 751806 - 752771 + | aspartate carbamoyltransferase catalytic subunit TERM 658 752800 - 752777 - g 80 -6 -4.78205 | opp_overlap 752778 752781, overlap 752778 752781 AAAAAAATGACAAAA CCAAGCGTTT TTCA AAACGCTCGT ATTATTGACCCTTCC TERM 659 752799 - 752778 - g 75 -9.5 -3.43262 | opp_overlap 752778 752781, overlap 752777 752781 AAAAAATGACAAAAC CAAGCGTTT TTCA AAACGCTCG TATTATTGACCCTTC TERM 660 752796 - 752781 - g 71 -7.6 -3.79813 | opp_overlap 752778 752781, overlap 752778 752777 AAATGACAAAACCAA GCGTTT TTCA AAACGC TCGTATTATTGACCC pyrC2 752768 - 754063 + | dihydroorotase TERM 661 754489 - 754507 + GF 75 -2.5 -5.31275 | AGCAGCAATTGTTTT CATTATT GTATG GATAATG TTTTTTATACTGACA BQ06400 754082 - 754717 + | hypothetical protein dprA 754674 - 755906 + | DNA processing chain A TERM 662 756932 - 756901 - g 72 -10.3 -2.61548 | overlap 756897 756919 GTCGATTACAACGGA CTTGAAAACCATC CGAAAT GAAGGTTTTCAAG CAAGACTAACAATGT TERM 663 757550 - 757531 - g 71 -4.9 -4.57209 | overlap 757532 ACAGCAAGGAGAAAA CCACGCG AATCTA CGCGCGA CAGGTTCCGTTATTC TERM 664 757976 - 757964 - g 71 -6.3 -4.19258 | ATATCGGATGGAAAA CTTTC CTG GAAAG ACGTATTGCGCAATT topA 756308 - 758869 + | DNA topoisomerase I TERM 665 758942 - 758927 - g 85 -5.4 -5.27779 | TTCAATATGAAAAAA CTACCT GACA AGGCAG AGATTCTTTCTTTTA vacB 758873 - 761149 + | VacB and RNase II family exoribonuclease TERM 666 761421 - 761407 - f 71 -5.7 -4.49344 | opp_overlap 761407 AAAGGGATTAGAAAA TCTGC AATGG GCAGA TTTATCTTTCTCTTA rpmG 762566 - 762733 + | 50S ribosomal protein L33 TERM 667 762805 - 762816 + F 88 -5.8 -5.73978 | overlap 762796 TTCATTCTTAAAGTC CCCT TTTA AGGG TTTTTTCTTTGTGAT TERM 668 763508 - 763496 - g 78 -2.7 -5.38047 | overlap 763507 CATTTATACAAAAAA GATAA ATA TCATC GCATTCTCGCGACAT BQ06450 763205 - 763699 + | hypothetical protein TERM 669 763701 - 763712 + F 71 -3 -5.03715 | opp_overlap 763701, overlap 763711 CTCGAACAGAATAAA GAAA ATAT TTTC TTTTTTAAAGATCAT TERM 670 764029 - 764039 + G 72 -3.2 -5.08255 | CTCTCTTTGCTATTG TTCC TAT GGGA TTTTGTTTTCCAGGT TERM 671 764078 - 764066 - g 70 -3.5 -4.91511 | AGGTTATGATAAAAA TAAAT CTG ATTTA CCGCCAAGGCGTGAG BQ06460 763749 - 764384 + | hypothetical protein TERM 672 764422 - 764406 - f 74 -6.6 -4.2748 | GATTGAGAAAAAACA TCGATC GCCTT GATCGA AAAATTTTGCATCTT BQ06470 764415 - 764858 + | transcriptional regulator TERM 673 765501 - 765520 + T 75 -8 -3.7347 | TGTGCTCATCCATTG TGAATCTT TGGT AAGATTCA TTATTGGATATTCCA BQ06500 767361 - 766381 - | tRNA-dihydrouridine synthase A TERM 674 767296 - 767284 - G 72 -3.3 -5.16237 | opp_overlap 767284 AAGGCGATGAAAAAA TCTGC AAT GCTGA TCTGTCCAGCCCAAC TERM 675 768025 - 768009 - H 70 -2.3 -5.35224 | GCTATAAAAATAAAA TTTGC ATTAGGA GCAAA TGAAAAAAACTGCAC accB 768460 - 768951 + | acetyl-CoA carboxylase biotin carboxyl carrier protein subunit TERM 676 769401 - 769389 - g 70 -7.7 -3.67597 | CCTGTCACTGAAGAA GCAGA GGC TCTGC GTACCGCCAGTGAAA accC 768966 - 770324 + | acetyl-CoA carboxylase biotin carboxylase subunit TERM 677 770551 - 770535 - T 72 -9.5 -2.62616 | opp_overlap 770520 TCAGTTGGTAGAGCA CCTGATT TGT AATCAGG GGGTCGGGAGTTCGA BQ06550 770913 - 770683 - | hypothetical protein TERM 678 771553 - 771536 - H 76 -7.7 -4.03078 | opp_overlap 771536 CTACCAGATCATAAA CGCTTCC TGAA AGAAGCG TTTGAAGATAATCGG lemA 773810 - 774454 + | cytoplasmic membrane protein BQ06590 774454 - 775305 + | hypothetical protein lipB 775458 - 776195 + | lipoyltransferase parE 776279 - 778336 + | DNA topoisomerase IV subunit B TERM 679 778357 - 778400 + T 81 -11.1 -2.78891 | gap 1, opp_overlap 778362, overlap 778368 AAAAAAATATCTCGC TCAAACCACTGCTGCTGCGT CAATA ACGC-GCAGTTGTGGATTGA TAGTTCCATTCCAAT TERM 680 778395 - 778362 - T 73 -8.1 -3.54307 | gap 1, opp_overlap 778357 778368 AATATCTCGCTCAAA CCACTGCTGCTGCGTC AAT AACGC-GCAGTTGTGG ATTGATAGTTCCATT recJ 780141 - 778357 - | single-stranded-DNA-specific exonuclease TERM 681 778974 - 778961 - G 90 -3.1 -6.00086 | ACAGGACAAAAAAAA CGTTC TTTT AAACG GGATGCAAGAATACC TERM 682 780282 - 780296 + H 88 -7.2 -4.88163 | opp_overlap 780282 780280 780277 ACTTCAATAATAAGA TACTGT TTT ACAGTA TTTATTTTCTCTTGA rplM 780432 - 780896 + | 50S ribosomal protein L13 rpsI 780899 - 781384 + | 30S ribosomal protein S9 TERM 683 781438 - 781451 + T 73 -4.5 -5.0133 | GTGTGGGGCTTTTTG TCTGC TAAA GCGGA TTTTTTGGAAAAATA TERM 684 781560 - 781571 + T 70 -4.4 -4.67038 | opp_overlap 781560 TCAGCTAGAAAAACT CTGA ATTC TCAG TTTTCATTTTCAGGA divK 782070 - 781705 - | response regulator TERM 685 781830 - 781820 - G 76 -6.8 -4.34402 | overlap 781822 CCTTTCATAGCAAAA GCTG TTA CAGC AACAACGGGAACAGA TERM 686 783157 - 783131 - H 72 -4.7 -4.82333 | overlap 783150 ATAACAATGTAAAAA TAAAATTATTC TCATT AAATAATTTTA TTAAGATTTATATAA TERM 687 783204 - 783231 + H 82 -8.8 -4.04719 | opp_overlap 783204 ATCTATTTCACTTAA TTTTTATTTTTA TATA TAAAAATAAAAA TTTATAATATATGAT TERM 688 783231 - 783204 - H 71 -8.8 -3.06915 | opp_overlap 783204 ATCTATTTCACTTAA TTTTTATTTTTA TATA TAAAAATAAAAA TTTATAATATATGAT TERM 689 783963 - 783949 - H 73 -4.4 -4.99435 | opp_overlap 783930 783954 783955, overlap 783930 783942 783954 TTTAATAATTAAAAA TATATT TTT AATATA AAATTTATCATTAAA TERM 690 784020 - 784007 - H 84 -3.9 -5.75822 | overlap 783998 TATAAATTAAAAAAA TTCTT TTTA AAGAA AATTTGATACATCCA BQ06660 784024 - 784293 + | hypothetical protein BQ06670 787483 - 784811 - | hypothetical protein BQ06710 792687 - 791293 - | amino acid permease TERM 691 791711 - 791682 - G 77 -5.1 -4.93177 | overlap 791685 CAAAAATCAATAAAA TAACAAAAATTGG TATA CCATTTTTTGATA AATATTGAAATTTCT TERM 692 791708 - 791685 - G 79 -6.8 -4.50353 | overlap 791682 AAATCAATAAAATAA CAAAAATTGG TATA CCATTTTTTG ATAAATATTGAAATT TERM 693 791968 - 791958 - G 79 -6.8 -4.58236 | TATAAAAGAGCAAAA TCCG AAT CGGA GTAGAATTAATGGCC TERM 694 792983 - 792951 - R 78 -2 -5.67063 | overlap 792952 792953 TTGATGATAAAAAAA CTCTATGATGTTAC TTCAC GCATCATCATAGCA CTTAAGTTCAATGAT TERM 695 793593 - 793580 - R 77 -5.3 -4.87037 | AAGATATATTAAAAA CCATT GAAC AATGG CCCTTCAGATACTCT BQ06720 794345 - 793986 - | hypothetical protein hutH 796320 - 794782 - | histidine ammonia-lyase TERM 696 796112 - 796137 + g 83 -9.1 -4.07687 | AAAACAGCTACATCG TTTGCATCGAT TTTA ATCGATGCCAA TTTTCCAAAACCGGT TERM 697 796493 - 796468 - H 70 -4.1 -4.73677 | overlap 796474 CTTATAAGAAAGAAA CAAAAATGTTG AAAA CAAAATTTCTG AATTCCAATTTATCT TERM 698 796484 - 796474 - H 79 -4 -5.56573 | overlap 796468 AGAAAGAAACAAAAA TGTT GAA AACA AAATTTCTGAATTCC TERM 699 796820 - 796859 + H 74 -5.8 -4.58663 | GCTCTATCCAGCTGA GCTACGGGTGCTTAAA ACTAATTA TTAAATCATCCGTAGC TTTTTAACCGATCAT ppnK 797097 - 797870 + | inorganic polyphosphate/ATP-NAD kinase TERM 700 799092 - 799070 - g 77 -7.8 -4.14511 | AATCGGAGCGGAAAA GCTTTTACGA TCG TCACAAAAGC TGATCAAAAGTATAT TERM 701 799152 - 799140 - g 75 -2.7 -5.30155 | TGAGCAATGAAAAAA TTGAA TGG CTCAA TGGAGATCTCTCGAC BQ06760 798020 - 799423 + | ATP-dependent RNA helicase gltX 800864 - 799485 - | glutamyl-tRNA synthetase nadE 802551 - 800875 - | NAD synthetase TERM 702 801104 - 801124 + g 88 -8.3 -4.67038 | opp_overlap 801104 TCCAAGATAGGATAA GGAGGAAGA GAA TCTTCATCC TTTTGATTTTCGGAA TERM 703 801124 - 801104 - G 72 -8.3 -3.52475 | opp_overlap 801104 TCCAAGATAGGATAA GGAGGAAGA GAA TCTTCATCC TTTTGATTTTCGGAA BQ06790 804042 - 802663 - | 2-dehydro-3-deoxyphosphoheptonatealdolase TERM 704 803455 - 803465 + g 75 -8.2 -4.07568 | overlap 803452 CAGCTTATAACGCTC GCCC TGT GGGC TTTTAGAAACGAAAC gor 805509 - 804118 - | glutathione reductase TERM 705 804606 - 804618 + g 74 -9.1 -3.46387 | opp_overlap 804605, overlap 804604 TAACATCGCCAACAG CCCCA ATA TGGGG TATATTTGTTGTCAT TERM 706 805656 - 805640 - R 86 -8 -4.72986 | opp_overlap 805640 805639 TACTTTTATTAAAAA TGGCAG AAAAA CTGCCA CTTTCAAAAACAAAC BQ06810 806266 - 805709 - | hypothetical protein rpiA 807066 - 806362 - | ribose-5-phosphate isomerase A TERM 707 807236 - 807252 + r 70 -3.8 -4.87626 | ACAATTTTATCTCTT TGTAAA ACCTG TTTACA TTTTTCATGTTCAAG TERM 708 807518 - 807507 - R 71 -3 -5.1356 | CTGTACCAAGAAAAA CATT GGAG AATG GGAGAAGTTATACAA BQ06830 809798 - 807540 - | DNA uptake protein TERM 709 808073 - 808061 - G 70 -2.7 -5.00884 | ATGTTTTGCAAAAAA TTAGT CCA ACCAA GCCTCCACTAAAGAA TERM 710 810251 - 810232 - g 70 -7.8 -3.64162 | overlap 810243 AGGAATTAGCTGAAA TGCGCGAA AATG CCCGCGCA GAAGGCCGCCCACCG gltX 809910 - 811337 + | glutamyl-tRNA synthetase TERM 711 811681 - 811666 - g 70 -5.4 -4.33218 | opp_overlap 811672 AATAAAAAAATAGAA CTCTCC GTGC GGAAAG GCACTCTTGGTCCTG TERM 712 812856 - 812840 - g 75 -3 -5.24531 | gap 1 ATCCTGCACAAAAAA TTGGTCG ACCA CG-CCAA CTCTACACAGGCTAT gltA 811618 - 812934 + | type II citrate synthase TERM 713 814381 - 814397 + F 70 -2.3 -5.23316 | opp_overlap 814375 814379 814382, overlap 814382 TGGTGAAGATGAATC ATTTCAT GAA ATGAAAA TTTTTTAATATAATC TERM 714 814864 - 814851 - g 76 -6.7 -4.40552 | opp_overlap 814850 TCTAGCAAAAAAATA CGATG CTAT CATCG CTTCCCTCGCGCCTA BQ06860 814606 - 815358 + | ABC transporter, periplasmic amino acid-binding protein TERM 715 815374 - 815335 - f 76 -4 -5.25656 | gap 1, opp_overlap 815327, overlap 815327 815338 AAAATTATGAAAAAA TATTTTACATTCGATATTT ATT AAATATC-AATATAAACTA AATTTGAACAAATTA BQ06870 815439 - 816158 + | ABC transporter, permease protein BQ06880 816158 - 816865 + | ABC transporter, permease protein BQ06890 816943 - 817716 + | amino-acid ABC transporter lpxB 818922 - 817735 - | lipid-A-disaccharide synthase cdsA1 819787 - 818915 - | phosphatidate cytidyltransferase lpxA 820614 - 819790 - | UDP-N-acetylglucosamine acyltransferase TERM 716 820289 - 820273 - G 90 -3.7 -5.88565 | GGCATAACAAAAAAA TTGGCAA TCA TCACCAA CAATCGTCATTCCCA fabZ 821104 - 820637 - | (3R)-hydroxymyristoyl-ACP dehydratase lpxD 822152 - 821106 - | UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase TERM 717 821991 - 821971 - G 89 -10.5 -4.1673 | GAACTTCCTAATAAA GCATCAGAA AAC TTCCGATGC TCCACAAACACAAGA omp89 824615 - 822219 - | Outer membrane protein TERM 718 823414 - 823398 - G 74 -3.7 -5.04987 | overlap 823387 AACAGCTTTAAAAAA GCCTAAA CTC TCTAGAC GACGTTTTGCTCGCT BQ06960 825975 - 824827 - | membrane-associated zinc metalloprotease TERM 719 825626 - 825642 + g 74 -3.7 -5.0133 | TTGAATAGGGGACCA GCAAAAA CAG TTATTGC TTTTTTCCAAGCATG cdsA2 826806 - 825991 - | phosphatidate cytidylyltransferase TERM 720 826074 - 826064 - G 72 -3.2 -5.10765 | AAATAAAGAAGAAAA GTAG CCC CCAC CAACCCATCAATACG TERM 721 826859 - 826845 - R 82 -4.2 -5.4505 | opp_overlap 826845 826849 CTCTGCAAGAAAAAA GCTTTG CTC CACAGC ATTTTTACATTTACA TERM 722 826849 - 826860 + r 70 -4.4 -4.81851 | opp_overlap 826845, overlap 826845 GCAAGAAAAAAGCTT TGCT CCAC AGCA TTTTTACATTTACAT TERM 723 827157 - 827142 - R 77 -3.2 -5.54079 | TCAAAAATTAAAAAA CATCAC AAAC GTGCTG CGCAAAACAACAATC frr 828092 - 827532 - | ribosome recycling factor pyrH 828849 - 828130 - | uridylate kinase tsf 829932 - 829009 - | elongation factor Ts TERM 724 829704 - 829694 - G 73 -5.4 -4.64676 | opp_overlap 829694 TTACGTGCAACAAAA TCTG TTT CAGA ATTAATTTCAACCAA rpsB 830817 - 830044 - | 30S ribosomal protein S2 TERM 725 830867 - 830854 - R 87 -6.7 -5.40072 | CCTCCGCGAAAAAAA GTAGG AGAA CCTAC TACCGGCGGACATCT BQ07020 831801 - 830977 - | hypothetical protein TERM 726 831875 - 831856 - H 76 -3.6 -5.2166 | CAATAAGGCAAAAAA GGCTAACT TCTT AATTAACC ACACATTTCCTTAAA BQ07030 831946 - 832407 + | hypothetical protein TERM 727 832795 - 832785 - g 72 -3.2 -5.01732 | AATGCCGTCAAAAAA GCCT TTC AAGC AGATGGTGTAACAGT BQ07040 832548 - 832970 + | Hit-like protein involved in cell-cycle regulation clpA 835329 - 832978 - | endopeptidase Clp ATP-binding chain a TERM 728 835343 - 835368 + r 79 -8.5 -3.73858 | gap 1, overlap 835346 ATAACCCCTCACTTC CATTCCATTACA CAT TGTAATGG-ATG TTCATTTTGATGTGC TERM 729 835346 - 835366 + r 89 -11.3 -3.44148 | overlap 835343 ACCCCTCACTTCCAT TCCATTACA CAT TGTAATGGA TGTTCATTTTGATGT BQ07060 835707 - 835336 - | hypothetical protein TERM 730 835496 - 835510 + g 73 -5.8 -4.56597 | opp_overlap 835496 GTTGCTTCTTCGAAA CTTTTT TTA AAAAAG TTTTTCAAAACAAAA TERM 731 835521 - 835510 - G 70 -3 -5.00884 | ACTTTTTTTAAAAAA GTTT TTCA AAAC AAAAACAACAAAATC TERM 732 836551 - 836567 + G 74 -5.2 -4.72986 | opp_overlap 836546 836556 ACAGTATAAATTGTT CAAAAC AAAAA GTTTTG TTTTTCGTGGACATA dacA2 835952 - 837304 + | penicillin-binding protein BQ07080 837337 - 837615 + | hypothetical protein sdaA 839518 - 838121 - | L-serine dehydratase TERM 733 839789 - 839769 - R 70 -4.1 -4.7261 | opp_overlap 839769, overlap 839765 839771 ACGTAGTAAAATAAA TATTAACAT GCA ATGTTAAAA TTCAATAAGAATGAA pnbA 840563 - 839874 - | nitroreductase TERM 734 840086 - 840046 - G 73 -6.7 -4.29738 | TGATAGTCAGCAAAA GCAGCTTGGGGACATGTAT CTA ATCCAAACCCCCGCGCTGC TAACATAATGGTTTG TERM 735 841750 - 841728 - R 100 -8.5 -5.85178 | opp_overlap 841727 841728 AAGATCTAAAAAAAA CACCTGAAT TCTCT ATTCAGGCG CTTTTATATCGCTGC rpoC 845989 - 841781 - | DNA-directed RNA polymerase subunit beta' TERM 736 844178 - 844190 + g 71 -4.9 -4.50218 | opp_overlap 844178 ATAAACCTGATCAAT CATTT TAG AAATG TTCTTTTTAGTCATT TERM 737 846161 - 846138 - R 71 -8.9 -3.00003 | opp_overlap 846137 846140, overlap 846140 CTATCAGAACAATCA GAGCGCACT CTTTCC AGTACGCTC GTTAAATTATTGTTC rpoB 850319 - 846168 - | DNA-directed RNA polymerase subunit beta TERM 738 850603 - 850580 - R 100 -9.6 -5.10033 | TCAAGAGAAAGAAAA TCGGTGAACA TAAA TGCCCACCGA TAAAATTAAATTACT rplL 850985 - 850614 - | 50S ribosomal protein L7/L12 TERM 739 851067 - 851044 - R 90 -3.9 -5.81412 | overlap 851046 TTTATTTAAAAAAAA CAGAAAAGC ATCATA GCTCTTCTA TCAACATGAACACAA rplJ 851608 - 851090 - | 50S ribosomal protein L10 TERM 740 851626 - 851648 + r 90 -12.2 -3.43619 | opp_overlap 851630 TCTCTCTCCATTTGA CAGATTTGTT TTA AACAAATCTG TTGGTTACCTTTGAT rplA 852675 - 851977 - | 50S ribosomal protein L1 rplK 853108 - 852680 - | 50S ribosomal protein L11 nusG 853787 - 853257 - | transcription antitermination protein NusG TERM 741 853306 - 853294 - G 72 -9.1 -3.34267 | overlap 853292 AATTCCAAATCAACA GGCGT AGG ACGCC CAAAAATCAGCACCT TERM 742 853689 - 853676 - G 74 -3.9 -5.1356 | CTGTAGGAACAAAAA TCTTT TCAA AAAGA TGATCGAGCCCTTTT TERM 743 853724 - 853735 + g 76 -4.4 -5.08255 | TCGCCTCCTTGTCAA TAGC TTCC GCTA TTTTCTTTTCAAAAT secE 854020 - 853808 - | preprotein translocase subunit SecE TERM 744 854242 - 854254 + r 73 -6.9 -4.07568 | CAGCAGGGCTTGAAC CCGCG ACC TGCGG TTTTGGAGACCGCCG tuf 855528 - 854353 - | elongation factor Tu TERM 745 855642 - 855669 + H 72 -9.2 -2.55544 | opp_overlap 855638, overlap 855637 TGTCCAATTTATGAT GTATGATGGAAG CGCC CTCCCATCATGC TCACTTGCCTAATCA TERM 746 855720 - 855710 - H 71 -6.8 -4.2704 | TCTAGCATCAATAAA CGCT TGG AGCG GGTAGCGGGAATCGA TERM 747 856216 - 856177 - g 80 -2.2 -5.60993 | gap 1 CTCGGGATAAAAAAA GCTTTCCCTTTCGACCTGC AGC GCACCT-GAAACAGAAAGC AGTTCCCTTGAGACA TERM 748 856301 - 856283 - g 76 -4.6 -5.03314 | TGCAGCTTTAAAAAA TCCTAAAA GAG TTTTTGGA CATCTCTATATCACA TERM 749 856590 - 856614 + G 80 -10 -3.72324 | CTTATTACCACTTGT CGCCACTCTC CCCAA GAAAGTGGCG TTCTTGCTAAAGCTG BQ07240 856122 - 856940 + | tRNA /rRNA methyltransferase BQ07250 857670 - 856930 - | hypothetical protein TERM 750 857013 - 856998 - G 72 -3.2 -5.08011 | overlap 857009 AAAAGCCTGAAAAAA GCCCAC CAAT ATGAGC CTCCCATGCAATTGA TERM 751 857837 - 857814 - R 72 -4.8 -4.66163 | gap 1, opp_overlap 857815 857816, overlap 857815 857816 ATCTTTATGTAAAAA TGCTTTTGTAT CTT ATACAAAAG-A TTTCCCAAAAAACAG TERM 752 857836 - 857816 - R 75 -9.9 -2.63208 | opp_overlap 857816 857815, overlap 857814 857815 CTTTATGTAAAAATG CTTTTGTAT CTT ATACAAAAG ATTTCCCAAAAAACA TERM 753 857816 - 857836 + r 75 -9.9 -2.71712 | opp_overlap 857814 857815 857816, overlap 857815 CTTTATGTAAAAATG CTTTTGTAT CTT ATACAAAAG ATTTCCCAAAAAACA BQ07260 858686 - 858261 - | hypothetical protein BQ07270 859168 - 858770 - | NADH dehydrogenase gatB 860850 - 859351 - | aspartyl/glutamyl-tRNA amidotransferase subunit B tig 862390 - 860981 - | trigger factor TERM 754 861503 - 861528 + g 72 -3.3 -5.09173 | opp_overlap 861507, overlap 861507 861522 ATTGTAATCAGCATC TAAAGCATCAA GAAT TTGACGCTTAA TTTTTTGGCGTATTA TERM 755 861964 - 861946 - G 71 -6 -4.30719 | overlap 861911 TCCGCGTAGAAGAAA GAACACGT TCT ACTTGTTC ATCAATCTCTTTTTC TERM 756 862534 - 862565 + r 70 -3.6 -4.87389 | opp_overlap 862541, overlap 862541 GAATTCCTTTAACGC GGATAGAGTGCACC ACTA GGTACACATTTTCC TTTATTTTTCAAGTG BQ07330 865508 - 865203 - | NADH-ubiquinone oxidoreductase TERM 757 866208 - 866198 - g 73 -5.4 -4.62002 | ATTAAGTATACAAAA GAGA GCC TCTC CTCACTCGAATCGTT BQ07350 866061 - 866375 + | hypothetical protein TERM 758 866508 - 866492 - T 70 -4.5 -4.65895 | opp_overlap 866504 CTTTCTATTGAAAAA TTTTAAC GAT GCTAAAA ACAATTTTTATTGAA BQ07360 867205 - 866516 - | hypothetical protein perM 868413 - 867202 - | permease protein TERM 759 867805 - 867790 - G 70 -5.4 -4.32048 | gap 1 TAATAACATGTAAAA GGCTACC ACA GGT-GCC ACAACGAAGAGGCTG TERM 760 869230 - 869245 + G 77 -8.2 -4.25283 | opp_overlap 869230 869218 AAAGTGGTCTAAAAT GGGGCG ATTA TGCCCC TTTTAATCCCCAAAT purM 868581 - 869666 + | phosphoribosylaminoimidazole synthetase purN 869663 - 870274 + | phosphoribosylglycinamide formyltransferase BQ07400 872981 - 870492 - | sensor histidine kinase TERM 761 872744 - 872731 - G 76 -3.1 -5.18297 | overlap 872732 GAATAATAAACAAAA CCTGA CAAA TCAGA AACTACAATTGCATC TERM 762 873732 - 873747 + G 72 -4.6 -4.71791 | opp_overlap 873731 873734 CCGCTGAAATCGAAG GACGGC ACGA GCCATC TTTATTTATTCCTGT BQ07410 873257 - 873775 + | hypothetical protein dksA 874244 - 873828 - | DnaK suppressor protein nmoB 875085 - 874576 - | 4-hydroxyphenylacetate 3-monooxygenase TERM 763 874833 - 874818 - G 70 -2.5 -5.00884 | AGCGCCTGGAAAAAA CATCC GCTAGT GGACG ATGTTTTCCTGCCAA rpe 875258 - 875932 + | Pentose (ribulose)-5-phosphate-3-epimerase TERM 764 876790 - 876808 + G 72 -8.8 -3.61178 | overlap 876791 AAATTTAACTGGGTT AGCACGCA TGG TGCGTGCC TTTGCAATACCTGCC TERM 765 876791 - 876807 + G 83 -12.3 -2.76492 | overlap 876790 AATTTAACTGGGTTA GCACGCA TGG TGCGTGC CTTTGCAATACCTGC purB 875942 - 877261 + | adenylosuccinate lyase BQ07460 877322 - 877870 + | hypothetical protein purC 878046 - 878810 + | phosphoribosylaminoimidazole-succinocarboxamide synthase TERM 766 878836 - 878815 - f 93 -5.9 -5.83211 | opp_overlap 878814 878818, overlap 878818 TAGTAAAATAAAAAA CAAGGTGAT ATTA ATCACCTTC CTTTAAATTGTAAGT TERM 767 878818 - 878833 + F 71 -7.6 -3.58177 | opp_overlap 878815 878818, overlap 878814 TAAAATAAAAAACAA GGTGAT ATTA ATCACC TTCCTTTAAATTGTA TERM 768 878833 - 878818 - f 88 -7.6 -4.94109 | opp_overlap 878818 878814, overlap 878815 TAAAATAAAAAACAA GGTGAT ATTA ATCACC TTCCTTTAAATTGTA BQ07480 878898 - 879137 + | hypothetical protein purQ 879150 - 879821 + | phosphoribosylformylglycinamidine synthase subunit I purL 880112 - 882322 + | phosphoribosylformylglycinamidine synthase II BQ07510 882394 - 882627 + | hypothetical protein TERM 769 882805 - 882817 + G 70 -5.5 -4.3739 | AGGAATACCTGAAGC TCCGC AAT GTGGA TTTTCTGGACAAGTC BQ07520 882725 - 883057 + | hypothetical protein BQ07530 883113 - 884381 + | bicyclomycin resistance protein TERM 770 884430 - 884450 + T 73 -4 -5.03314 | AGATAGCATTCTTTT TCTCGCTT GTCTA AAGCTAGA TTTTTTACACCTAAC parC 887593 - 885344 - | DNA topoisomerase IV subunit A TERM 771 886733 - 886746 + g 72 -3.1 -5.08824 | overlap 886732 TAACCGCCGTGCAAG CAGTA ATTC TGCTG TTTTTTCAATAAGAC TERM 772 887962 - 887950 - R 89 -3.5 -5.9362 | opp_overlap 887950 TAAAATATAAAAAAA TTTAA ATC TTAAA TGGTTTTTATTTATT TERM 773 888032 - 887999 - R 79 -4.3 -5.2291 | gap 1, opp_overlap 888009 888031, overlap 888003 888022 888023 888031 ATACTATAATAAAAA TA-AATTATAATATTT AAT AAATATTATAATCATA AATTATACATATAAT TERM 774 888027 - 888003 - R 95 -8.9 -5.09221 | opp_overlap 888009, overlap 887999 888022 888023 TATAATAAAAATAAA TTATAATATTT AAT AAATATTATAA TCATAAATTATACAT aspS 890103 - 888310 - | aspartyl-tRNA synthetase TERM 775 889987 - 889953 - G 82 -11.6 -3.21595 | overlap 889954 889956 AAGCTGGATTAGCAA CGATTTGCGTGATC CCAAAAT GATCACGCAAATCC ACAAAAAGAATTCCG TERM 776 889986 - 889954 - G 95 -15.1 -2.52635 | overlap 889953 889956 AGCTGGATTAGCAAC GATTTGCGTGATC CCAAAAT GATCACGCAAATC CACAAAAAGAATTCC TERM 777 889984 - 889956 - G 81 -11.9 -2.80016 | overlap 889954 889953 CTGGATTAGCAACGA TTTGCGTGATC CCAAAAT GATCACGCAAA TCCACAAAAAGAATT rnd2 890177 - 891391 + | ribonuclease D BQ07580 893487 - 891976 - | exopolyphosphatase ppk 895683 - 893494 - | polyphosphate kinase TERM 778 894150 - 894137 - G 74 -5.3 -4.70879 | opp_overlap 894137 GTTAAAGGCGAAAAA GCAAT CTTC ATTGC TTTATTTGGGCGCAC TERM 779 894405 - 894384 - G 100 -7.3 -6.07969 | TAAAACCAAAAAAAA CTTGAACGC CCGC ACGCTCAAG ATCACGTGCCCAACG TERM 780 895829 - 895841 + H 83 -7.7 -4.65895 | CATTTCAAAACATTT GGGAA CCA TTCCC TTTTTCCATACGCAG BQ07600 895969 - 896208 + | hypothetical protein BQ07610 896242 - 897477 + | salicylate hydroxylase dnaE 901433 - 897945 - | DNA polymerase III subunit alpha TERM 781 898151 - 898167 + g 71 -9.5 -2.88252 | opp_overlap 898149, overlap 898149 TTTTTATAAAGAGGC GCATCAT TTT ATGATGC TGTGCTGCTTCGTTT TERM 782 899289 - 899272 - G 71 -6.3 -4.21974 | GCACGACGCAATAAA TCCGCTT CTCC AAGCGAA TACCCAGCAAGCACC TERM 783 902718 - 902685 - g 90 -3.3 -5.97575 | gap 1 AATGGACAAAAAAAA GCGATACAAGAT-ATT GCC AATGATCTTGCTTCAC CAGAACCCATGTTAA recG 901842 - 903950 + | ATP-dependent DNA helicase recG glmS 906156 - 904333 - | D-fructose-6-phosphate amidotransferase TERM 784 905963 - 905973 + g 73 -5.4 -4.63519 | CCAATCCCTAAACTT CCTT TTA AAGG TGTTTTTTTTAATTT glmU 907678 - 906332 - | UDP-N-acetylglucosamine pyrophosphorylase TERM 785 906911 - 906894 - G 73 -2.1 -5.22006 | gap 1 GTATCATAAGAAAAA TAAA-CAG TCT CTGGTTTA AGTATTGTAACTCCA TERM 786 906941 - 906953 + g 71 -6.9 -4.13767 | opp_overlap 906940 AGACAACATTAAATC GCGGG CTT TCCGC TTTTGCCATAAAGAA TERM 787 907144 - 907127 - G 72 -9.9 -3.04894 | overlap 907114 907126 AACTTTCTCTAAAAG GGAAAGC GCTC GCTTTCC GTTAAGAGCCAATAT BQ07660 908483 - 907695 - | cytochrome c-type biogenesis protein TERM 788 908129 - 908119 - G 71 -6.8 -4.07568 | opp_overlap 908109 TTGTGCGTTTGAAAA CGTG CTT CACG AAATAAAAAAGCAAC TERM 789 908286 - 908273 - G 76 -3.1 -5.24551 | overlap 908274 CTAAAGCAACAAAAA CGGTT GTAA AACCA AGCACAAAAGCAATA BQ07670 909540 - 908530 - | hypothetical protein TERM 790 909467 - 909479 + g 80 -6.3 -4.83169 | opp_overlap 909467 ACGCTTAACCATAAA CATTG GCG CAATG TTTTTGTAAGAAAAT BQ07680 909882 - 909559 - | hypothetical protein TERM 791 909954 - 909938 - H 80 -6.7 -4.72696 | CCCAAACAAAAAGAA GTTTATT CAT AATAAAC CAATCTAAATTTACG dgt 909990 - 911192 + | deoxyguanosinetriphosphate triphosphohydrolase-like protein TERM 792 911662 - 911680 + G 73 -7.5 -3.98775 | overlap 911678 GCCGGGGTGCCGTTT TTGGAGA TGTGC TCTCCAA TTTGCTTCAATTTGT argS 911223 - 912980 + | arginyl-tRNA synthetase TERM 793 913272 - 913248 - g 72 -3.5 -5.10154 | AGTGAAAATCAAAAA GATCCGTCCTT TTT ACAGACTGATC GGTCAATCTCTCAGA TERM 794 914078 - 914064 - g 72 -3.6 -5.1356 | opp_overlap 914064 TTTTATGAAGAAAAA TTCTTA AAA CAAGAA GTTTATACTGCAAAA BQ07710 913131 - 915653 + | hypothetical protein TERM 795 915655 - 915693 + T 100 -14.8 -4.2679 | opp_overlap 915655 915659, overlap 915659 915691 TCGTCACACGCTAAA CAAATAATGCGACGGTTT TAA AAACCCTCGCACTATTTG TTTTGCTAACAATTG TERM 796 915693 - 915655 - T 100 -17 -3.63627 | opp_overlap 915655 915659 915691, overlap 915659 TCGTCACACGCTAAA CAAATAATGCGACGGTTT TAA AAACCCTCGCACTATTTG TTTTGCTAACAATTG TERM 797 915659 - 915689 + T 100 -9.8 -4.72007 | opp_overlap 915655 915659, overlap 915655 CACACGCTAAACAAA TAATGCGACGGTTT TAA AAACCCTCGCACTA TTTGTTTTGCTAACA TERM 798 915689 - 915659 - T 100 -12 -4.45117 | opp_overlap 915659 915655, overlap 915655 CACACGCTAAACAAA TAATGCGACGGTTT TAA AAACCCTCGCACTA TTTGTTTTGCTAACA BQ07720 916113 - 915769 - | hypothetical protein TERM 799 916341 - 916359 + H 82 -5.4 -5.31275 | CTAATAATAAAGTTG TAATGAAA GCA TTTCGTTA TTTTTTATAATAAAA ilvE 916414 - 917520 + | branched-chain amino acid aminotransferase TERM 800 917583 - 917544 - T 73 -8 -3.57387 | opp_overlap 917544 AATATATCCTCCAAA CACTTCCATAAACGCATT CTTA AACCCTTTTATGGAAGCG TCCTTTTGAAAAAAA glpX 918628 - 917642 - | fructose 1,6-bisphosphatase II TERM 801 918534 - 918556 + g 82 -11.2 -3.17723 | CCCCGCCCGCGCCAG CGTGCAGCTG CAA CAGCAGCGCG TTCAGTTACACGTAC TERM 802 919320 - 919335 + H 77 -6.2 -4.8048 | GGGTGAGCACGTTAC TCGATT CCAA AATCGA TTTTTAATGTAAACC TERM 803 919988 - 920016 + H 73 -3.9 -5.18355 | gap 1, overlap 919990 920012 AACAGCAACAACTTT GATTGGTCTTCC ACAGTA GGAAG-CCAAAC TTTTTGCTTTTTCAC TERM 804 921414 - 921426 + H 88 -7.7 -5.01811 | opp_overlap 921413 CTATTTCAGTAAACT GCTCT GAA AGAGC TTTTTGCTTTACTGA TERM 805 921753 - 921767 + H 79 -4.2 -5.38951 | GGTTCGATTCCCCTT GGGCGT ACC ATGCTC TTTTTTATATCACTT icdA 922330 - 923544 + | isocitrate dehydrogenase TERM 806 923967 - 923988 + G 77 -8.1 -4.1673 | gap 1 CATTGCTTCGACTAT GC-CCCTATT TTT AATAGGGCGC TTTGTTCAAGGATTC BQ07790 923659 - 925089 + | transport transmembrane protein TERM 807 925464 - 925449 - T 84 -6.2 -5.36181 | AAAGAAAAAAACAAA TATGCT CCAA AGCATA GCAAAAAATATCATC TERM 808 925752 - 925741 - T 70 -3.6 -4.88918 | GCATTCGAAACAAAA GGCA AGAA CGCC CCAATAAGGAAAAAG TERM 809 927224 - 927271 + T 72 -6 -4.3351 | opp_overlap 927217 927229, overlap 927217 927229 ATGTAAACTTAACTT TTAAATATTGTAATATAATTTA CTTT TATTTTATATTACAATATTTTA TTTATTAGGTTTTAT TERM 810 927229 - 927266 + T 83 -5.9 -5.10665 | opp_overlap 927229, overlap 927224 AACTTAACTTTTAAA TATTGTAATATAATTTA CTTT TATTTTATATTACAATA TTTTATTTATTAGGT TERM 811 927567 - 927579 + T 72 -4.9 -4.72272 | ATTTCTCACTTCATA CTTTT AAC AAAAG TTTTTGATACAAAAA TERM 812 928222 - 928203 - T 79 -9.4 -3.38812 | overlap 928201 CCGCCTTGAACAATA CCAAACAA CGCT TTGTTTGG CTGATCACCAAAAGC ppiB1 929433 - 928921 - | peptidyl prolyl cis-trans isomerase b TERM 813 929096 - 929083 - G 85 -3.8 -5.53079 | overlap 929093 AAAACAGATAAAAAA CTGC GAATTA GCAG AATTTGGATTCTGAC ppiB2 930047 - 929457 - | peptidyl-prolyl cis-trans isomerase b coaD 930555 - 930037 - | phosphopantetheine adenylyltransferase TERM 814 930495 - 930485 - G 72 -3.2 -5.10933 | TCAGCCAAAACAAAA CTGC CTT GCAA AATAGCAATATGACC gyrA 933356 - 930579 - | DNA gyrase subunit A ssb 934108 - 933590 - | single-strand binding protein (ssb) uvrA 934447 - 937338 + | excinuclease ABC subunit A glnB 937635 - 937973 + | nitrogen regulatory protein p-II TERM 815 939387 - 939372 - g 70 -3.2 -4.88407 | overlap 939352 939373 TCATTCAAGTAAAAA TGCAAG AAGT CTTGCG CTACGAAACAACTCC glnA2 938030 - 939439 + | glutamine synthetase I TERM 816 939469 - 939487 + F 70 -3.9 -4.92363 | opp_overlap 939484, overlap 939484 TTTTCAATTAAGAAA TGGAGAT AAAAA ATTTCCA TTTTTGTGGATATTT BQ07900 939596 - 940141 + | hypothetical protein BQ07910 940970 - 940185 - | hypothetical protein TERM 817 940689 - 940699 + g 72 -3.2 -5.10461 | GGTGTTAACAAGGCG TGTC ATT GGCA TTTTTGTTGGATCAA TERM 818 941095 - 941061 - R 93 -10.3 -3.99013 | TAAAAAGCGGAGAAA TGGTAATGTTTCTTT GTAAA AAACAAACATTACCA GAGAGAAGTCTTACA rluC 942566 - 941583 - | ribosomal large subunit pseudouridine synthase c TERM 819 944224 - 944210 - g 72 -8.6 -3.615 | overlap 944208 AGGCGGAGAGAAACA GCGATT AGC AATCGC ACGCGCTGTTTTAAA txpA 942777 - 944564 + | cyclic beta-1,2-glucan ABC transporter TERM 820 944653 - 944669 + T 77 -5.9 -4.77036 | AATCAAGGGATTTGT TGGATTG ACG TAATCCA TTTTTAGTGCTGCAA alaS 947431 - 944765 - | alanyl-tRNA synthetase TERM 821 944998 - 945010 + g 78 -2.7 -5.48825 | TGAAGGCAACGACTC CAGAT CCA ATTTG TTTTTTTCCATCATC TERM 822 946503 - 946491 - G 75 -5.5 -4.78753 | TTAACACCAAGAAAA TGCGC ATG ACGCA TAGCACGACGCATAA recA 948685 - 947642 - | recombinase A BQ07960 950610 - 949291 - | recombination factor protein RarA TERM 823 950299 - 950274 - G 71 -4.1 -5.0065 | CATCGACAAACAAAA GCATTTTACAT CCAG ACATAAAACGC GCTTGAGCAACTTCA htrA2 952013 - 950619 - | heat shock protein TERM 824 952067 - 952053 - R 85 -8.6 -4.16016 | overlap 952041 CTACTCTTTAATAAA GAGGAT AAG ATCCTC CCTCATTATAAGCTA TERM 825 952246 - 952230 - R 95 -8.7 -5.72616 | ATGCACATAAAAAAA CCGTCCT GGA AAGACGG CCTTCAAAAATCCAA TERM 826 952282 - 952292 + r 77 -5.4 -4.98531 | opp_overlap 952282, overlap 952282 AAAATACCTTATAAA GAAG AAG CTTC TTTTTCATTTGCAGC rplQ 952706 - 952275 - | 50S ribosomal protein L17 rpoA 953744 - 952731 - | DNA-directed RNA polymerase subunit alpha rpsK 954227 - 953838 - | 30S ribosomal protein S11 TERM 827 954353 - 954329 - R 100 -9.5 -5.52909 | opp_overlap 954329 GAATATCTAAAAAAA TAACAGTCTTT TTT AAAGACTATTA TTTTTTCTTACCGGC TERM 828 954329 - 954353 + r 93 -7.3 -5.4505 | opp_overlap 954329 GAATATCTAAAAAAA TAACAGTCTTT TTT AAAGACTATTA TTTTTTCTTACCGGC rpsM 954719 - 954351 - | 30S ribosomal protein S13 TERM 829 954391 - 954402 + g 76 -7.2 -4.17296 | TTAGCTGGCCCTTTA CGCG TACG CGCG TTTGTATGTGTACGC adk 955478 - 954900 - | adenylate kinase TERM 830 955417 - 955395 - G 72 -9.2 -3.28791 | opp_overlap 955386 ATCGCCTGTTGATAA CTGAGGGATA CGA TATTCCTCAG TCAACATCCTAGCTT secY 956821 - 955475 - | preprotein translocase subunit SecY rplO 957411 - 956947 - | 50S ribosomal protein L15 rpmD 957637 - 957431 - | 50S ribosomal protein L30 rpsE 958217 - 957669 - | 30S ribosomal protein S5 rplR 958693 - 958331 - | 50S ribosomal protein L18 rplF 959239 - 958706 - | 50S ribosomal protein L6 rpsH 959676 - 959278 - | 30S ribosomal protein S8 rpsN 959996 - 959691 - | 30S ribosomal protein S14 TERM 831 960065 - 960046 - R 80 -6.4 -4.74084 | AAAGGAAAATTAAAA GCACGCAA CAAC TCACGTGC CTCATCATCCGTTTT rplE 960578 - 960021 - | 50S ribosomal protein L5 rplX 960885 - 960571 - | 50S ribosomal protein L24 rplN 961266 - 960898 - | 50S ribosomal protein L14 rpsQ 961650 - 961411 - | 30S ribosomal protein S17 TERM 832 961537 - 961547 + g 73 -5.4 -4.63932 | overlap 961530 CTTATACTTTTTAGA CTGT CTA ACAG TTTTCTTGAGAAGTG rpmC 961863 - 961663 - | 50S ribosomal protein L29 rplP 962289 - 961876 - | 50S ribosomal protein L16 TERM 833 962082 - 962070 - G 70 -9.1 -3.12351 | TCGGTTTAGATGTAA CCGGA AGA TCCGG AAAAATACGAATCCA rpsC 963036 - 962326 - | 30S ribosomal protein S3 rplV 963425 - 963036 - | 50S ribosomal protein L22 rpsS 963706 - 963428 - | 30S ribosomal protein S19 rplB 964555 - 963722 - | 50S ribosomal protein L2 rplW 964871 - 964578 - | 50S ribosomal protein L23 rplD 965488 - 964868 - | 50S ribosomal protein L4 rplC 966228 - 965488 - | 50S ribosomal protein L3 rpsJ 966564 - 966256 - | 30S ribosomal protein S10 TERM 834 966590 - 966611 + r 80 -10.2 -3.02043 | opp_overlap 966590 TCCCTGTTATGCAAA GCGCCTTT AACAAC AAAGGCGC TCTTCAACAACCATT TERM 835 966611 - 966590 - R 89 -10.9 -3.64703 | opp_overlap 966590 TCCCTGTTATGCAAA GCGCCTTTA ACAA CAAAGGCGC TCTTCAACAACCATT tuf 967804 - 966629 - | elongation factor Tu fusA 969952 - 967868 - | elongation factor G TERM 836 969562 - 969542 - G 82 -8.3 -4.25056 | opp_overlap 969542 CATTTTATTAACAAA TACCATGCG CGG CACACGGTA TTTCTCAGCTTGTCG rpsG 970450 - 969980 - | 30S ribosomal protein S7 rpsL 970840 - 970469 - | 30S ribosomal protein S12 TERM 837 970978 - 970947 - H 78 -7.4 -4.23758 | gap 1, opp_overlap 970957 AGCTTACACGCAAAA TCGGGCATACCTGTT AGA AACAGTT-TACCCGA CTACACGCAGAGAAG xthA1 971373 - 972155 + | exodeoxyribonuclease III TERM 838 972803 - 972790 - g 74 -3.9 -5.055 | opp_overlap 972790 TCAACGTTCAAAAAA CATTA ACTT TAATG TTGTGAAGGGAAAAG ybeJ 972281 - 973192 + | amino-acid ABC transporter binding protein gltJ 973334 - 974086 + | amino acid permease TERM 839 974755 - 974767 + G 77 -6.3 -4.60797 | GTTATTTGTTTTACA CTATC GCA GATAG TTTTATATCTACAGA gltK 974089 - 974805 + | amino acid permease gltL 974842 - 975588 + | glutamate /aspartate transport ATP-binding protein TERM 840 976816 - 976790 - T 72 -8 -3.34431 | opp_overlap 976789 AAAACAGTTTTAGAA TGGATAGCTCAT GGA ATGAGCGAACCA CTTAAATGTGAAAAC TERM 841 976914 - 976900 - T 74 -5.7 -4.81249 | opp_overlap 976900 976902 TCGTAAACGTAAAAA CACTG GAGCT CAGTG TACTGTTCATTATAG valS 979762 - 977039 - | valyl-tRNA synthetase TERM 842 979305 - 979288 - G 72 -3.4 -5.11112 | gap 1, overlap 979289 AAAGCGTAACAAAAA CCTCACG AACAG CGTG-GG ACAAACCTTCATCCA BQ08360 980489 - 979923 - | hypothetical protein TERM 843 980153 - 980172 + g 76 -4.4 -5.0666 | gap 1, overlap 980132 TTTTATGAACAGAGC GCTGTTCTT CAG AAGAA-AGC TTTATTTTTTGCATA BQ08370 982062 - 980737 - | Outer membrane protein pcm2 982769 - 982095 - | protein-L-isoaspartate(D-aspartate) O-methyltransferase TERM 844 983289 - 983321 + r 86 -2.6 -5.7946 | gap 1, overlap 983308 CGGCTGTTAACCGGT TGG-TCGCTGGTTCG AATC CGGCCCGGGGAGCCA TTTTTTTCTTACAAG TERM 845 983724 - 983708 - R 74 -2.4 -5.48303 | ACAACTCGAAAAAAA TTATTT CTACT AAATAA AGCTTAAACTCAACG TERM 846 985765 - 985734 - R 100 -11.8 -5.86976 | gap 1, opp_overlap 985734 985739, overlap 985739 GCACAAAATAAAAAA GCAA-AGGTCCTATC AAG GATAGGACCTCTTAC GCTAATTTAATTTTG TERM 847 985759 - 985739 - R 100 -14.1 -4.53334 | opp_overlap 985739 985734, overlap 985734 AAATAAAAAAGCAAA GGTCCTATC AAG GATAGGACC TCTTACGCTAATTTA TERM 848 985739 - 985759 + r 93 -14.1 -3.0873 | opp_overlap 985734 985739, overlap 985734 AAATAAAAAAGCAAA GGTCCTATC AAG GATAGGACC TCTTACGCTAATTTA hbpE 986685 - 985786 - | hemin binding protein E TERM 849 987195 - 987181 - R 77 -5.8 -4.76874 | opp_overlap 987189 AATATAAAATGAAAA CAAATT TTT AATTTG GAAAATTATTATCAT TERM 850 987416 - 987397 - R 72 -5.1 -4.67478 | opp_overlap 987397 TAAATATAAAAAGAA TTTCTTC GAATAA GAAGAAA ATTTCTGTACGTATT BQ08440 988002 - 987730 - | hypothetical protein BQ08450 990371 - 987996 - | hypothetical protein TERM 851 988721 - 988705 - G 71 -5.1 -4.62392 | CAACAAGCAAAGAAA GCAATAG TTC CTGTTGC AATAGAAATCAAAGA TERM 852 989345 - 989332 - G 74 -3.9 -5.00884 | overlap 989343 ACGCTCCCTAAAAAA GTAAT CAAA ATTAC CAATTGGTATGCTGC TERM 853 989776 - 989786 + g 84 -6.8 -4.93877 | opp_overlap 989774 989776 AACAAAAGAAAATCA GAGG AAG CCTC TTTTGTTTGCTCAAC TERM 854 990585 - 990573 - g 79 -4.9 -5.0538 | opp_overlap 990573 CTCCATCGCAAAAAA GAAAA ATT TTTTC CTTTTACGGCCTCGC BQ08460 990543 - 990926 + | hypothetical protein secD 991006 - 993519 + | bifunctional preprotein translocase subunit SecD/SecF TERM 855 993705 - 993727 + G 73 -8.5 -3.70511 | TTGCGAGTCGTTTGC GTATCTCAC CCCTC GTGGGATAC TTGTTAGCTGGTGTT TERM 856 994355 - 994377 + G 71 -4.8 -4.59293 | overlap 994343 994356 TTTGCTACTGCATTA GGAGTAGCTT TCG GAGCTGCTCA TTTATTTGGTGTTTC TERM 857 994356 - 994376 + G 70 -8.3 -3.33949 | overlap 994343 994355 TTGCTACTGCATTAG GAGTAGCTT TCG GAGCTGCTC ATTTATTTGGTGTTT TERM 858 994525 - 994548 + G 80 -2.4 -5.62219 | overlap 994533 TGTAGGCATGTTATT TGACCCAG GGAAAATA CTGAGTCA TTTTTTTCCTCTCTT BQ08490 993620 - 995374 + | potassium-efflux system protein TERM 859 996149 - 996177 + G 79 -9.6 -3.67173 | gap 1 CACTCTCACCCTTCT CTCCAACGCC-CC AGCT GGAGGAGTTGGAG TTCTTGAAGCTTTAT BQ08500 995403 - 996356 + | hypothetical protein TERM 860 996888 - 996898 + T 71 -6.8 -4.11216 | opp_overlap 996887 GCTATCTTTTAACAT GAGG ATT CCTC TTTTAAACATAAAAA BQ08510 998629 - 997064 - | hypothetical protein TERM 861 998370 - 998346 - G 75 -2.8 -5.26875 | TTTGCAAGCAAAAAA GCCCCACC ACTAATCAA GATGAGGC TATGCCAACTAAACA cycA 1001119 - 1002522 + | D-serine /D-alanine /glycine transporter TERM 862 1002580 - 1002540 - T 100 -14.4 -5.4251 | gap 1, opp_overlap 1002551, overlap 1002545 CCTATACATAAAAAA CATAT-CAAAAAGGGTAAC CAAA GTTACCCTTTTTGTACATG AACCTATATTTACAG TERM 863 1002574 - 1002545 - T 100 -16.7 -2.83161 | opp_overlap 1002551, overlap 1002540 ACATAAAAAACATAT CAAAAAGGGTAAC CAAA GTTACCCTTTTTG TACATGAACCTATAT TERM 864 1002551 - 1002568 + T 100 -9.9 -4.87665 | opp_overlap 1002545 1002540 AAAACATATCAAAAA GGGTAAC CAAA GTTACCC TTTTTGTACATGAAC ilvC 1003632 - 1002613 - | ketol-acid reductoisomerase TERM 865 1004404 - 1004394 - R 77 -5.4 -4.98103 | overlap 1004396 GAAGAAAACATAAAA CTTG CCT CAAG ACATTGATTACAGTA TERM 866 1005039 - 1005025 - R 73 -3.6 -5.06414 | opp_overlap 1005025, overlap 1005011 1005010 1005005 1005003 TTTTCTCAATAAAAA CAAAAA ATA CTTTTG TCTCTACTGAAAAAT pdxJ 1005997 - 1005263 - | pyridoxal phosphate biosynthetic protein PdxJ TERM 867 1006052 - 1006041 - R 74 -2.2 -5.53079 | AAAAGACAGAAAAAA GAGA CATT CCTC AGCATAAGCCCAGAC BQ08560 1007206 - 1006085 - | hypothetical protein TERM 868 1006765 - 1006743 - G 100 -9.9 -5.78622 | overlap 1006744 CTATTGGAAAAAAAA CTGCCTCCT GAGAT AGGAGGCAA CTGACCTGGATCACC TERM 869 1006764 - 1006744 - G 90 -11.2 -4.06089 | overlap 1006743 TATTGGAAAAAAAAC TGCCTCCT GAGAT AGGAGGCA ACTGACCTGGATCAC TERM 870 1007455 - 1007441 - R 76 -4.2 -5.09204 | overlap 1007445 ACACCTCAATAAAAA CTCATG CTT CTTGAG CAAAACACCTTACAG TERM 871 1008262 - 1008275 + r 77 -3.1 -5.46657 | overlap 1008256 TCAAGAGCATATTGT GGCAT AATA ATGTC TTTTTTCTTAGGATA TERM 872 1009437 - 1009452 + r 80 -10.4 -3.01712 | opp_overlap 1009437 CGGCACAATAAAAAA GGCTCC TCCA GGAGCC TATTACACACGAAAA TERM 873 1009452 - 1009437 - R 100 -10.4 -5.55769 | opp_overlap 1009437 CGGCACAATAAAAAA GGCTCC TCCA GGAGCC TATTACACACGAAAA miaA 1010511 - 1009624 - | RNA delta (2)-isopentenylpyrophosphate transferase TERM 874 1010744 - 1010712 - R 75 -7.1 -4.10144 | opp_overlap 1010713 1010720, overlap 1010714 1010720 TGAACACAACAATAA TACCAAAAGAAATTC AAA GCATTTCTTTTGGCT CTCATCATTTAATAA TERM 875 1010742 - 1010714 - R 91 -11.9 -3.62875 | opp_overlap 1010713 1010720, overlap 1010712 1010720 AACACAACAATAATA CCAAAAGAAATTC AAA GCATTTCTTTTGG CTCTCATCATTTAAT htrA3 1012660 - 1011143 - | Serine protease TERM 876 1012408 - 1012386 - G 76 -2.1 -5.40072 | opp_overlap 1012395 1012397, overlap 1012389 1012395 1012397 TTTGGTGTAAAAAAA TCACTAAAA TATTC TTTTAGCAA AGAATCTTCTGGGAT hflC 1013763 - 1012816 - | ftsH protease activity modulator hflC hflK 1014911 - 1013766 - | protease subunit hflK TERM 877 1014685 - 1014673 - G 85 -5.5 -5.2015 | TGAACAATATAAAAA GACTG GTA CAGCC AAAAAAACACAGCAA folA 1015541 - 1015020 - | dihydrofolate reductase thyA 1016332 - 1015538 - | thymidylate synthase TERM 878 1015843 - 1015825 - G 79 -3.1 -5.52909 | GAACACCTAAAAAAA TATCCGC CGAAC GCTGATA AAGCTGGCAAGACAA TERM 879 1015901 - 1015911 + g 76 -6.8 -4.39998 | opp_overlap 1015900 AAAGCAATGACAAGG TGGC AAA GCCA TTTCTTCTATCAATG TERM 880 1017633 - 1017617 - g 73 -7.3 -4.13767 | opp_overlap 1017617 TCTGGTATCGTAAAA GCAGAAA TGT TTCCTGC TTCAATACGCGCAAT kgtP 1016543 - 1017850 + | Alpha-ketoglutarate permease TERM 881 1017862 - 1017899 + T 83 -11.5 -2.85668 | opp_overlap 1017852 1017866 1017873, overlap 1017873 TTAATTTTTTTATGT TAAACAAAAAAGCTCAG TATT CTGAGCTTTTTTGTGCA TGTCATATAAAAATG TERM 882 1017895 - 1017866 - T 100 -16.7 -3.59979 | opp_overlap 1017862 1017873, overlap 1017852 1017873 TTTTTTTATGTTAAA CAAAAAAGCTCAG TATT CTGAGCTTTTTTG TGCATGTCATATAAA TERM 883 1017873 - 1017888 + T 95 -9 -5.29782 | opp_overlap 1017873 1017866, overlap 1017862 ATGTTAAACAAAAAA GCTCAG TATT CTGAGC TTTTTTGTGCATGTC TERM 884 1017888 - 1017873 - T 95 -9 -5.64421 | opp_overlap 1017862 1017873, overlap 1017866 ATGTTAAACAAAAAA GCTCAG TATT CTGAGC TTTTTTGTGCATGTC TERM 885 1018909 - 1018889 - T 83 -7.5 -4.83169 | overlap 1018890 ACCTTCCTATAAAAA TTAGGACCG CTT CGGCCCTAC TACTACAAAAATAGA TERM 886 1018908 - 1018890 - T 87 -11 -3.49419 | overlap 1018889 CCTTCCTATAAAAAT TAGGACCG CTT CGGCCCTA CTACTACAAAAATAG TERM 887 1020385 - 1020358 - T 76 -10 -2.84602 | opp_overlap 1020364, overlap 1020334 1020364 TTCATTCCATGAAAC GAAAAAGCCCAA GTAA TTGGGCTTTTTT ATCATTATTGCATCA TERM 888 1020379 - 1020364 - T 95 -9 -5.01811 | opp_overlap 1020364, overlap 1020358 CCATGAAACGAAAAA GCCCAA GTAA TTGGGC TTTTTTATCATTATT TERM 889 1020364 - 1020379 + T 95 -9 -5.4111 | opp_overlap 1020364 1020358 CCATGAAACGAAAAA GCCCAA GTAA TTGGGC TTTTTTATCATTATT BQ08670 1020726 - 1020421 - | hypothetical protein BQ08680 1021343 - 1021888 + | hypothetical protein TERM 890 1021959 - 1021945 - g 100 -6.4 -6.09196 | TCGAAAACAAAAAAA GCTTGC GGA ACAAGC CATTCATGCAGAGAA TERM 891 1022024 - 1022012 - g 74 -4.9 -4.75063 | overlap 1022005 1022004 ACAAAAGCTGAAAAA CTTTT TCA AAAAG AAGAATCTTCAAAAG TERM 892 1022034 - 1022024 - g 73 -5.4 -4.58685 | AAACTTTTTCAAAAA GAAG AAT CTTC AAAAGCCCAAAAATT BQ08690 1021901 - 1022083 + | hypothetical protein BQ08700 1022127 - 1022414 + | hypothetical protein TERM 893 1022548 - 1022536 - g 74 -6.3 -4.37527 | opp_overlap 1022542 CCATAAGCATGAAAA TAACC CTG GGTTA ACCGCCCATGCTGTA TERM 894 1022972 - 1022957 - g 73 -7.6 -4.07687 | ATTCGTCTTTTAAAA CAGCTT ATTC AAGCTG AAGGATTAGATGATA TERM 895 1023981 - 1023959 - g 71 -6.3 -4.21462 | opp_overlap 1023973, overlap 1023949 ACGGATGAGTTAAAA CCCAAAGCA CGCAC TGCTTTGCG AAGCATTGTCGAAAA uvrD 1022471 - 1024801 + | DNA helicase II BQ08730 1025565 - 1026146 + | sco1/2 family protein prmA 1026178 - 1027047 + | ribosomal protein L11 methyltransferase BQ08750 1027065 - 1028891 + | aminopeptidase p protein ligA 1031594 - 1029435 - | NAD-dependent DNA ligase LigA TERM 896 1030336 - 1030350 + g 71 -7 -4.10161 | opp_overlap 1030331 1030335 1030333 AAAACAAAAGCAGAG GCGCCC TTT GGACGC TTTTCAGCAATAATA recN 1033385 - 1031724 - | DNA repair protein recN TERM 897 1032087 - 1032076 - G 76 -2.2 -5.4756 | AATGCCAATAAAAAA CGAG ACAG CTCA CCCCCAGAAGCCACA comL 1034285 - 1033392 - | competence lipoprotein comL precursor TERM 898 1033808 - 1033796 - G 79 -9.1 -3.79113 | AGCGCTCCACAAGAA GCTGC ATA GCAGC AATAGCACGTTTCGT lpxC 1035328 - 1034456 - | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase TERM 899 1035435 - 1035406 - R 77 -8.7 -3.56155 | opp_overlap 1035411, overlap 1035407 1035411 TATCAATAGCAAATA GTAAACCCGCTTA GTAA TAAGCGAGTTTAT AAAAAACAGAGCATT TERM 900 1035434 - 1035407 - R 84 -12.2 -2.7297 | opp_overlap 1035411, overlap 1035406 1035411 ATCAATAGCAAATAG TAAACCCGCTTA GTAA TAAGCGAGTTTA TAAAAAACAGAGCAT TERM 901 1035430 - 1035411 - R 82 -8.6 -4.03321 | opp_overlap 1035411, overlap 1035407 1035406 ATAGCAAATAGTAAA CCCGCTTA GTAA TAAGCGAG TTTATAAAAAACAGA ftsZ 1037317 - 1035545 - | cell division protein FtsZ TERM 902 1036768 - 1036779 + g 73 -2.2 -5.21709 | CCATAGCAAAAGCAT CAGC AAAT GTTG TTTTTTCATCTGCAA ftsA 1038687 - 1037389 - | cell division protein ftsA TERM 903 1038708 - 1038722 + r 93 -8.6 -4.82901 | ATTTCCTGCCTTTCG CGTGTT TAA AACACG TTTTTCTGCCACCAC ftsQ 1039616 - 1038687 - | cell division protein ftsQ ddl 1040503 - 1039583 - | D-alanine--D-alanine ligase murB 1041800 - 1040754 - | UDP-N-acetylenolpyruvoylglucosamine reductase murC 1043127 - 1041700 - | UDP-N-acetylmuramate--L-alanine ligase murG 1044247 - 1043111 - | N-acetylglucosaminyl transferase TERM 904 1043673 - 1043658 - G 95 -4.6 -5.75945 | ATTCGTGAAAAAAAA GAAGCC CCTT GGCTAC CACCAAAAACCAAGA TERM 905 1044002 - 1043986 - G 87 -6.5 -5.31456 | opp_overlap 1043985, overlap 1043968 1043988 GCAATTTATAAAAAA GCGCCAA CGA TTGGCCC ATTCCCTTTAATAAA ftsW 1045394 - 1044237 - | cell division protein ftsW TERM 906 1044996 - 1044986 - G 70 -3.2 -5.00616 | TCTGTTCCGAAAAAA GCCA AGC TGAC ATAACCACAAAAGCT TERM 907 1045226 - 1045197 - G 81 -5.7 -5.07053 | overlap 1045184 1045217 AACCATCGTAAAAAA CGCTGGAATACTA AAAA TGATATGCCAGCG CACAAAATAAAAATT murD 1046926 - 1045526 - | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase TERM 908 1045800 - 1045790 - G 72 -3.2 -5.16237 | AATTTTATGAAAAAA CCCT CTA AGAG CTTCAATCCCCCCTT TERM 909 1046509 - 1046486 - G 73 -10.4 -2.85668 | CATCTGCACATCATA GCCCATTTGT TCCA ACAAATGAGC AAGCAAAGCTGTCGT TERM 910 1046902 - 1046887 - G 75 -5.4 -4.74103 | opp_overlap 1046887 TTCCCAATCCAAAAA GAGCAA CTTT TTGCCC TTTATAACACGTACA mraY 1048001 - 1046931 - | phospho-N-acetylmuramoyl-pentapeptide-transferase TERM 911 1047240 - 1047229 - G 73 -7.2 -4.03995 | TCCCCCATAAAAATA GCCG CTGG CGGC GCATTAAACCATAAA murF 1049444 - 1048023 - | UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6- diaminopimelate-D-alanyl-D-alanine ligase TERM 912 1049140 - 1049156 + g 70 -3.6 -4.8543 | overlap 1049142 GCTCTTGAACGCTTA CGTGCG GCTTG CGCAAG TTTTTCTAAGGCTTG murE 1050892 - 1049441 - | UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase TERM 913 1049794 - 1049776 - G 74 -4.6 -4.8622 | CTCCGCAACCAAAAA CAAGGA TTAAACG TCCTTG TGTAAAGGGGCGAAC ftsI 1052658 - 1050916 - | penicillin-binding protein TERM 914 1051054 - 1051066 + g 70 -7.7 -3.741 | opp_overlap 1051051 CCCAGCATTCAATCC TGCTG TTG CAGCA TATTTTCCATCTTCA TERM 915 1051413 - 1051397 - G 73 -8.7 -3.77196 | opp_overlap 1051397 1051398, overlap 1051398 CCACCATTCATTAAA GCAGCAG CAC CTACTGC TGTTTGCAAGGGCGT TERM 916 1052663 - 1052647 - G 70 -5.9 -4.45168 | CTGGGAAAAGAGAAA CAATGAT TTC ATCATCG CACGCCTTTTTGAAC BQ08930 1053062 - 1052658 - | hypothetical protein mraW 1054057 - 1053059 - | S-adenosyl-methyltransferase MraW TERM 917 1053832 - 1053812 - G 73 -6.9 -4.1466 | ATCCAACTGTGAAAA CTCCATTTG CAT CAAACGAAG TCGTGGAAAAAATTC TERM 918 1054640 - 1054664 + r 74 -5.5 -4.65895 | overlap 1054642 TTTCCCTAGGGTCGC CCCCGCCGGGT GTT ACCCGGCACCG TTTTTCCATGGAGCC TERM 919 1054830 - 1054813 - R 76 -4.1 -5.16237 | opp_overlap 1054813 1054812 1054815 AATCTGATCAAAAAA CACTTTG CTTT CAAGGTG CATTTTATTTCAATG BQ08970 1055344 - 1054835 - | transmembrane protein TERM 920 1055691 - 1055681 - R 80 -6.8 -4.8269 | opp_overlap 1055681 TACAATTATCAAAAA CCTC ATT GAGG TCAATTCCACAACCG TERM 921 1055884 - 1055897 + r 74 -5.3 -4.68456 | opp_overlap 1055872 TAAGAAACTCATGAC TGTGT CTCA ACACA TTATTTTTTAATCGT TERM 922 1056200 - 1056188 - R 80 -2.6 -5.69793 | ATACCAAACAAAAAA GGGC GCCAT ACCC TTTCTGCATGCTTTC BQ08980 1056661 - 1056287 - | hypothetical protein TERM 923 1056799 - 1056772 - R 100 -13.4 -4.67234 | ACTGAATTCTAAAAA GCCTGACTGAGG AAAT CCGCAGCCAGGC CCGACAATCTAAGGG TERM 924 1056913 - 1056903 - R 70 -4 -4.93877 | TGCTATGAAATAAAA TGTT CTA AACA ACAAGAAATTCTTAA TERM 925 1057007 - 1056997 - R 73 -4 -5.10497 | overlap 1056999 AATTTAGGCAAAAAA CATT CAA AATG ATCCAATTTGAAGCA TERM 926 1057219 - 1057191 - R 70 -4 -4.93296 | CTATCACCATAAAAA TCAAAGTGTGAA TCTTT TTAACACTTTAA GATTGTACAAAGAAT TERM 927 1057455 - 1057444 - R 79 -4.4 -5.3104 | TCACGAAAAAGAAAA TCAG AACT CTGA ATGCATTTATTTCGA TERM 928 1057921 - 1057938 + r 83 -7.1 -4.652 | opp_overlap 1057921 CTGCTCTTGCATTAA GAAACAA CACA TTGTTTC TTTTTCAAATGGTTT TERM 929 1058410 - 1058427 + r 70 -4.1 -4.73108 | opp_overlap 1058413, overlap 1058413 CAAGCCAAAGTTTAA CCATGAG CCCA CTCATTG TTTTCATTTTGTAGA TERM 930 1059301 - 1059278 - R 73 -6.9 -4.06419 | CTTTTTTATAAATAA TCCTATAAA AATTTA TTTATAGGA ATAGAAAGTCAAGCA BQ09000 1061350 - 1059701 - | putative ABC transporter ATP-binding protein TERM 931 1061545 - 1061529 - g 90 -5.1 -5.58209 | overlap 1061543 CTAAATGCAAAAAAA TGCCCCT TCC AAGAGCA AAAAGCAAATCTTTT BQ09010 1061518 - 1062060 + | hypothetical protein pncA 1062101 - 1062709 + | pyrazinamidase /nicotinamidase pnca BQ09030 1063809 - 1062757 - | hypothetical protein BQ09040 1064161 - 1064700 + | hypothetical protein TERM 932 1064789 - 1064734 - f 95 -12.3 -3.85603 | opp_overlap 1064738, overlap 1064738 GCGATGAAACAAACA CAAACTTTATCAGCATAGAAAAA TTAGAGCACT TCTTTCCTTGCTGATAAAGTTTG ATGTGCCACGTGGAA TERM 933 1064785 - 1064738 - f 80 -7.3 -4.50993 | opp_overlap 1064738, overlap 1064734 TGAAACAAACACAAA CTTTATCAGCATAGAAAAA TTAGAGCACT TCTTTCCTTGCTGATAAAG TTTGATGTGCCACGT BQ09050 1065121 - 1065300 + | hypothetical protein TERM 934 1067107 - 1067079 - T 70 -6.9 -3.78529 | overlap 1067077 AGAAGCAGTAAAACA CATTCCTATCTTT GCA AAAAACAAGAATG GAATTTAGAACAAAA TERM 935 1067798 - 1067814 + T 76 -6.5 -4.56702 | TCCCTATTTCTTTGT CCAGTCA TCA TGACCGG TTTGTTTCCTTCACG BQ09070 1068506 - 1068192 - | phage related protein TERM 936 1068765 - 1068755 - H 71 -3.2 -5.05782 | ACTGATTTCAAAAAA CGCT CAC AACG GAAGTGCCTCAACAT BQ09100 1069758 - 1070072 + | hypothetical protein TERM 937 1072635 - 1072610 - f 72 -9.1 -2.61199 | gap 1, overlap 1072609 GAACCCCCAACCAAG CGGTTATGAGCC GCT GGCTC-TAACCA ATTGAGCTACAGGCC TERM 938 1072965 - 1072953 - g 88 -4.1 -5.85244 | overlap 1072958 1072961 AAGCAAAATAAAAAA CGCAA CTA TTACG GTTACCGCAACTGGT BQ09140 1072837 - 1073574 + | Outer membrane protein TERM 939 1073621 - 1073649 + T 85 -11.8 -3.08073 | opp_overlap 1073612 AAATGATCTATCTCA TCACCGGTCTTC ACAGA GAATACCGGTGA TATGTTCGAGATAAT TERM 940 1073910 - 1073894 - T 73 -8.7 -3.17794 | overlap 1073892 1073896 AATTTACGATGAACA TAGCCAG ACA CTGGCCA GTCTCCGCATCTAAA TERM 941 1073908 - 1073896 - T 74 -9.1 -3.14693 | overlap 1073894 1073892 TTTACGATGAACATA GCCAG ACA CTGGC CAGTCTCCGCATCTA TERM 942 1075052 - 1075038 - T 89 -6.4 -5.61881 | GCTCAAAAAGAAAAA CACCGT ATA ACGATG ATGAACAATCTTTCA rpoD 1077653 - 1075641 - | RNA polymerase sigma factor RpoD TERM 943 1077975 - 1077999 + r 93 -8.7 -4.73094 | TAGGCTTTAGGTGAC TGATTCGCT CCAAAAA AGCGAATCA TTTTATCTTAATCTT dnaG 1079935 - 1078007 - | DNA primase TERM 944 1078301 - 1078311 + g 81 -5.4 -5.03747 | AAGATTTTTCATACG CTCT AAA AGAG TTTTTTGCCCCCTTT TERM 945 1078858 - 1078843 - G 74 -4 -5.10004 | gap 1, opp_overlap 1078854 AAAAAGAAGCAAAAA GCT-GTG CAC CACCAGC GCAAATAATTTCGTC TERM 946 1079833 - 1079823 - G 79 -5.4 -4.93316 | overlap 1079824 CAACAACACCAAAAA TCTC CCC GAGA AGGTTTACTTTTTTG TERM 947 1080346 - 1080359 + G 100 -3.9 -6.17268 | TATCCGTAATGTTTC TAATG CCTT CATTA TTTTTTTTGTTGTCC BQ09180 1080071 - 1081288 + | hypothetical protein TERM 948 1083604 - 1083580 - f 77 -5.7 -4.87892 | overlap 1083600 GGGCAAGAAAAGAAA TAAGCCTTGAC CTT GACAAAGCCTA CCCTAGTTAGACTTA BQ09200 1083650 - 1083901 + | hypothetical protein TERM 949 1084149 - 1084159 + F 74 -2.4 -5.51612 | TAGGGCTGTTTTAGT GCCG TAC CGTC TTTTCTTTTTTATAT ubiC 1085154 - 1085672 + | chorismate pyruvate lyase TERM 950 1085678 - 1085663 - f 72 -6.2 -4.38927 | GCTGTACACAACAAA TTCCAT ATAA ATGGAA AATATAAATATCTTG TERM 951 1086770 - 1086791 + F 85 -6.7 -5.37043 | gap 1, opp_overlap 1086768 1086770 1086766 TGCGATAATAAGACA CAC-ACCATA CAT TATGGTAGTG TTTTTTGTGTAACGT TERM 952 1087436 - 1087425 - g 74 -4.4 -4.90013 | GAATGGAATGAAAAA CCAT GGGT ATGG AATAAAGGCTATAGT TERM 953 1087778 - 1087756 - g 86 -7.6 -5.1286 | overlap 1087757 1087772 CAAAAACCATAAAAA TGCACCAAGG ACA CCATGGTGCC AACCACCCTGTTAAA TERM 954 1087777 - 1087757 - g 83 -11.1 -3.65276 | overlap 1087756 1087772 AAAAACCATAAAAAT GCACCAAGG ACA CCATGGTGC CAACCACCCTGTTAA TERM 955 1087927 - 1087938 + G 79 -3.6 -5.47159 | GCGGTCTTCGCATCA TCGG AAAA CCGG TTTTTTCTGTTCAAC carA 1086849 - 1088045 + | carbamoyl phosphate synthase small subunit BQ09230 1089431 - 1088211 - | transporter TERM 956 1089244 - 1089234 - G 76 -3.2 -5.34309 | AGGAGCAAACAAAAA CTGC ATC ACAG AATAAGCCACCAGTA carB 1090791 - 1094276 + | carbamoyl phosphate synthase large subunit TERM 957 1094289 - 1094304 + F 70 -4 -4.8667 | gap 1, overlap 1094291 TAAAGCTTTTGTTGT GC-TGCA AAA TGCATGC TTTTTATACGCTCTC TERM 958 1094471 - 1094482 + F 70 -4.4 -4.75174 | opp_overlap 1094471, overlap 1094461 AATTTCGATTCAGAA TCGT ATTG ACGA TTTTTGGCTTCAGTA BQ09250 1094530 - 1094739 + | cold shock protein TERM 959 1094792 - 1094771 - f 100 -13.1 -4.66609 | opp_overlap 1094771 1094791 TATTCTATTTAAAAA CCTTCGTCT TTAC AGACGAAGG TTTTTTGTATTCAAA TERM 960 1094771 - 1094792 + F 100 -13.1 -5.47159 | opp_overlap 1094771, overlap 1094791 TATTCTATTTAAAAA CCTTCGTCT TTAC AGACGAAGG TTTTTTGTATTCAAA aatA 1095076 - 1096278 + | aspartate aminotransferase TERM 961 1096907 - 1096890 - T 100 -5.5 -6.60239 | AAAAACAAAAAAAAA CCGGACA CGTA CATCCGG CAAGTTTGGAAAACC BQ09270 1097999 - 1097094 - | LysR family transcriptional regulator trxB 1099009 - 1098056 - | thioredoxin reductase TERM 962 1098192 - 1098169 - G 74 -5.3 -4.72272 | opp_overlap 1098171 1098172 1098174, overlap 1098172 CCCCCGCAGCAAAAA CACCAGCAA TGCTTG TTGCTGTTG AATCCGGCGCTGTCC TERM 963 1100425 - 1100436 + G 86 -4.4 -5.51612 | ATATATCGAGCGATG TTGC TAAA GCAA TTTTGTTTTTTGTAT trkH 1099320 - 1100714 + | trk system potassium uptake protein trkH TERM 964 1101205 - 1101219 + T 100 -10 -4.41844 | opp_overlap 1101205 TAAGACGGTTTACAA GAGGCA TAT TGCCTC TTTTCTCAAGGTTTT TERM 965 1101219 - 1101205 - T 79 -10 -3.31248 | opp_overlap 1101205 TAAGACGGTTTACAA GAGGCA TAT TGCCTC TTTTCTCAAGGTTTT lpcC 1102933 - 1101875 - | lipopolysaccharide core biosynthesis mannosyltransferase lpcC TERM 966 1102250 - 1102240 - G 70 -2.6 -5.1356 | CTTCACCAAGAAAAA TAAT GCG ATTA TCCAATTCAGCTTCA greA 1103413 - 1102940 - | transcription elongation factor GreA TERM 967 1103488 - 1103461 - H 100 -9.2 -5.38398 | opp_overlap 1103477 ATAAAAACAGAAAAA CGGCTCCCAAAA TTAC TTTTGGAATCCG AAAATTATAATTGTT BQ09320 1103747 - 1104079 + | hypothetical protein TERM 968 1104056 - 1104082 + F 79 -9.5 -3.36327 | opp_overlap 1104040, overlap 1104040 CACAGTACTTACTGT CATTCTCCACA ACAAC TGTGGTGAATG TTATGGATAAAATAG TERM 969 1106238 - 1106228 - g 90 -4 -5.88471 | opp_overlap 1106228 CAGTATCAAAAAAAA TATC AGC GATA TTCTCAATTCAGGAA TERM 970 1106313 - 1106303 - g 79 -6.8 -4.52589 | overlap 1106281 TTTTGTTACACAAAA CAGC AGA GCTG GCAATAATTTAGCAA TERM 971 1106613 - 1106589 - g 78 -2.9 -5.40873 | overlap 1106602 1106603 AAGACAAAAAGAAAA TCTCACCAAAA TAC TCTTGACAAGA AGATAAACAAAAAGA uvrB 1104330 - 1106654 + | excinuclease ABC subunit B TERM 972 1107507 - 1107496 - f 71 -3 -5.07652 | CGTTTTAAAATAAAA TGAA CATC TTCA ATAAAACCATGGGTA TERM 973 1108503 - 1108490 - f 71 -3.1 -5.18995 | opp_overlap 1108490, overlap 1108497 AATATAAGAGAAAAA CCATA AATA CATGG TGTATGATGCTTCAC BQ09340 1108507 - 1108980 + | RNA methyltransferase pcnB 1110478 - 1109225 - | Poly(A) polymerase TERM 974 1109296 - 1109306 + g 76 -6.8 -4.46212 | overlap 1109303 TCCATATTCTTTCTA GCTC TTT GAGC TTTTGTCCTAAAAGC TERM 975 1109966 - 1109954 - G 75 -2.6 -5.31059 | overlap 1109964 ATACCAAGCAAAAAA GCGA AAAAA CCGC AAAATACGCAAATAA BQ09360 1110731 - 1111762 + | regulatory protein BQ09370 1111762 - 1112673 + | hypothetical protein TERM 976 1113270 - 1113306 + G 70 -9.8 -2.63585 | gap 2, opp_overlap 1113270 1113272 1113279, overlap 1113269 1113267 1113272 TTCTCTCTCATTGAA CAGCTAAA-ACC-CAAAA CAT TTTTGTGGTATTTAGCTG ATATTTCCGATCTAA TERM 977 1113306 - 1113270 - g 72 -9.8 -3.05384 | gap 2, opp_overlap 1113270 1113269 1113267 1113272, overlap 1113272 1113279 TTCTCTCTCATTGAA CAGCTAAA-ACC-CAAAA CAT TTTTGTGGTATTTAGCTG ATATTTCCGATCTAA TERM 978 1114306 - 1114280 - g 71 -5 -4.57533 | AACAACAGTACAAAA CCCTTGGCGG ACATTAA CCGCCGATGG ACAACTACAACCCCC BQ09380 1112670 - 1115474 + | hypothetical protein TERM 979 1116660 - 1116649 - g 76 -2.2 -5.47821 | ATTTACCCAAAAAAA CTCG CTTG CGAA GACACCTTTAATAAG BQ09390 1115471 - 1117567 + | hypothetical protein BQ09400 1117821 - 1118723 + | hypothetical protein BQ09410 1119731 - 1118823 - | hypothetical protein TERM 980 1119986 - 1119972 - R 71 -8.6 -2.99558 | overlap 1119966 1119971 CAACAGCAATCAAAT GCATCA TTT TGATGC TCATAGCTTTTTAGG TERM 981 1120257 - 1120283 + r 83 -8.1 -4.27584 | opp_overlap 1120247 1120257 AATCACTCTTAAAAA GAATCTGGG CATTGGGGA CCCAGATTC TTTTCCCTTAGGAAT TERM 982 1120283 - 1120257 - R 89 -8.8 -4.60889 | opp_overlap 1120257, overlap 1120247 AATCACTCTTAAAAA GAATCTGGGC ATTGGGG ACCCAGATTC TTTTCCCTTAGGAAT TERM 983 1120370 - 1120383 + r 76 -4.5 -5.1523 | GGAAACACTCCATTG TGCCG CACT CGGTA TTTTTATATTATACC trmU 1122616 - 1121390 - | tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase BQ09440 1122930 - 1123205 + | hypothetical protein TERM 984 1123240 - 1123266 + T 84 -5.9 -5.37593 | overlap 1123242 AAAATACTTTTAGAA TAGCTAAGCTC GATAA GAGTTTGGCTG TTTTTTGCTTTCAGC TERM 985 1123242 - 1123264 + T 74 -6.3 -4.31698 | overlap 1123240 AATACTTTTAGAATA GCTAAGCTC GATAA GAGTTTGGC TGTTTTTTGCTTTCA BQ09450 1123717 - 1123331 - | hypothetical protein TERM 986 1124268 - 1124244 - H 85 -9.3 -3.99938 | overlap 1124242 GCCATAAAATAAAGA TGCTCCTCTTG ATT CGAGAGGAACA AAGTGAGGGATATAA ctrA 1124285 - 1124986 + | cell cycle transcriptional regulator ctra TERM 987 1125011 - 1125033 + T 70 -2 -5.28561 | opp_overlap 1125011, overlap 1125030 ATGCACATTGTAAAA TCTCGG AGTATAGCGGG CCGAGA TTTTTATTCTCTGTT BQ09470 1125838 - 1125200 - | hypothetical protein BQ09480 1126053 - 1126649 + | hypothetical protein BQ09490 1126677 - 1127339 + | hypothetical protein BQ09500 1128717 - 1127599 - | degT /dnrJ /eryC1 /strS family protein BQ09510 1129725 - 1128769 - | hypothetical protein TERM 988 1130154 - 1130170 + r 72 -8.1 -3.40444 | overlap 1130149 1130152 CTACCATTCTCTCTT GAAAAGA GTC TCTTTTC TGATTTTTTCAGTAT TERM 989 1130656 - 1130626 - R 79 -10.6 -2.81519 | opp_overlap 1130626, overlap 1130622 1130623 CAGAAAAATAACGCA CCTTATGAGCTATA TCT TATAGCTCACAACG TTGTACGCATAACAG TERM 990 1130626 - 1130656 + r 70 -8.4 -3.31144 | opp_overlap 1130626 1130622 1130623 CAGAAAAATAACGCA CCTTATGAGCTATA TCT TATAGCTCACAACG TTGTACGCATAACAG BQ09530 1131602 - 1130820 - | ABC transporter, ATP-binding protein oppD 1132474 - 1131614 - | oligopeptide transport ATP-binding protein TERM 991 1132263 - 1132251 - G 71 -6.3 -4.15044 | CTGGTTGTCAATAAA TTGAC ATC GTCAA AGCACATCTTTTTAG BQ09550 1133396 - 1132467 - | ABC transporter, permease protein BQ09560 1134472 - 1133399 - | ABC transporter permease protein TERM 992 1134346 - 1134336 - G 100 -5.4 -5.84381 | TGACCAATAAAAAAA GTGA TAG TCAC CAAACCAAGCAACGT BQ09570 1136200 - 1134563 - | ABC transporter, periplasmic oligopeptide-binding protein BQ09580 1138239 - 1136614 - | ABC transporter, periplasmic oligopeptide-binding protein tag 1140222 - 1139596 - | DNA-3-methyladenine glycosylase I xseA 1141627 - 1140200 - | exodeoxyribonuclease VII large subunit TERM 993 1140325 - 1140308 - G 78 -4.1 -5.1861 | overlap 1140310 TTCACCATCAAAAAA GCGCAAA TTTA TTTGCCC CGTTTCAGGAAACTG TERM 994 1141587 - 1141600 + g 73 -6.7 -4.18465 | GAAACACTAAATTCT GCAAC ATTC GTTGC TTCTGTTTTTTCAAA BQ09640 1143369 - 1142569 - | hypothetical protein TERM 995 1142617 - 1142602 - G 72 -3.2 -5.06585 | overlap 1142604 CAAACGATATAAAAA GCCTGT ACTA ACAGCC ACAAATACTGCAATA TERM 996 1142957 - 1142945 - G 71 -6.3 -4.25056 | GACTGTAGCAACAAA TAGGA TAA TCCTA AGCCTAAGCGTTTAT BQ09650 1144292 - 1143372 - | hypothetical protein BQ09660 1145176 - 1144451 - | hypothetical protein TERM 997 1144929 - 1144941 + g 72 -3.4 -5.11836 | CGCCGTGTAACCGTT GCTT CTTCT AAGC TTTTCTTTTCGCTCT etfB 1145895 - 1146641 + | electron transfer flavoprotein subunit beta TERM 998 1146841 - 1146825 - g 73 -10.1 -2.78508 | opp_overlap 1146832, overlap 1146812 1146824 1146822 GATCGCTGAAAACAG CGCCAAC CTT GCTGGCG TACGGCAAGTTCTTG etfA 1146694 - 1147614 + | electron transfer flavoprotein subunit alpha BQ09690 1147618 - 1149276 + | electron transfer flavoprotein-ubiquinone oxidoreductase TERM 999 1149434 - 1149421 - T 71 -5.3 -4.51699 | overlap 1149413 ATAACCATCATAAAA TACGA GATT TCGTA TACCTCATTCTCTAA TERM 1000 1150222 - 1150232 + T 70 -4 -5.02074 | opp_overlap 1150206 1150222, overlap 1150210 1150209 ATTTTCATTTGTAAA TGAA GTG TTCA TTTTTTGCAAAGTGG proC 1151001 - 1150201 - | pyrroline-5-carboxylate reductase BQ09710 1151302 - 1151057 - | hypothetical protein BQ09720 1151777 - 1151409 - | hypothetical protein TERM 1001 1151832 - 1151820 - R 75 -4.9 -5.02074 | GCATCTTTTAAAAAA TTCAA CCG TTGAA AAAGTTCTTGCTTTC BQ09730 1152688 - 1151801 - | hypothetical protein TERM 1002 1152528 - 1152514 - G 73 -5.6 -4.63486 | opp_overlap 1152516, overlap 1152516 AGCGTTCCAACAAAA TACGGG TCA CCCGTG TATCCTCGCAGGCCA TERM 1003 1152526 - 1152516 - G 73 -8.2 -3.93367 | opp_overlap 1152516, overlap 1152514 CGTTCCAACAAAATA CGGG TCA CCCG TGTATCCTCGCAGGC TERM 1004 1153597 - 1153614 + r 70 -2.1 -5.30155 | TCTACTAAAAAAACA TAAATTT AAAA GAATTTA TTTTTTACTTGATCA mrp 1154687 - 1153602 - | mrp protein TERM 1005 1154144 - 1154159 + g 70 -2.6 -5.00884 | overlap 1154145 ATTTAAGGCCAAATT TTTCAA GAGG TTGAAG TTTTTTCCCGCCAAT rpmH 1155264 - 1155398 + | 50S ribosomal protein L34 TERM 1006 1155473 - 1155489 + F 73 -8 -3.55622 | overlap 1155486 1155487 GTTATAAACCTCTGA TGCCTG CTTTT CAGGCA TTTAGCAAAATTGCG TERM 1007 1155487 - 1155510 + F 70 -8.2 -3.21934 | overlap 1155473 1155486 ATGCCTGCTTTTCAG GCATTTAGCA AAAT TGCGAAATGC ATTTTATGAAGAGAA TERM 1008 1155541 - 1155556 + G 70 -2.5 -5.1287 | overlap 1155536 AACATCCCTGCCGCA TTCGC AAGAGA GCGGA TTTTTTGGCTGTACG rnpA 1155507 - 1155908 + | ribonuclease P TERM 1009 1156261 - 1156243 - g 83 -6 -5.08824 | overlap 1156255 CTTTTACTTAAAAAA TATCGCCT AAC AGTCGATA AAAAATCGCCGGAAA BQ09780 1155898 - 1157739 + | putative inner membrane protein translocase component YidC cgpA 1157736 - 1158383 + | GTPase EngB BQ09800 1158531 - 1159223 + | glutathione S-transferase TERM 1010 1159322 - 1159304 - f 74 -6.8 -4.41087 | overlap 1159298 ATAACTAAAGAGAAA TTTTCTCC TAT AGAGAAAA AGAACCGTTAGAAAG TERM 1011 1159963 - 1159944 - g 73 -5.6 -4.59773 | TGTTATGCTTAAAAA TGTGAGCG TCAA CGCCCGCA ACGGCTATACAGGTG BQ09810 1159393 - 1160205 + | dihydrodipicolinate reductase gpmA 1160234 - 1160854 + | phosphoglyceromutase TERM 1012 1161178 - 1161188 + F 71 -5.4 -4.52949 | TTTTAAATCAAGACT GCTT TTC AAGC TATTTTTTTTAGCCA TERM 1013 1161250 - 1161238 - f 77 -4.9 -5.0538 | TTGCACTTTAAAAAA TCAAA ACT TTTGA AACTCTCTTGTAGCA TERM 1014 1161886 - 1161852 - f 79 -8.7 -3.86312 | opp_overlap 1161852 1161854 1161856, overlap 1161853 ACTGATAATGAAGAA TTCTTTTCCCTGAAA TTGCT TTTCAGGGAAAAGTT GATTTGATCAGTCAG TERM 1015 1161885 - 1161853 - f 84 -12.2 -2.91064 | opp_overlap 1161852 1161854 1161856, overlap 1161852 CTGATAATGAAGAAT TCTTTTCCCTGAAA TTGCT TTTCAGGGAAAAGT TGATTTGATCAGTCA TERM 1016 1161854 - 1161884 + F 100 -15.7 -3.57418 | opp_overlap 1161853 1161852, overlap 1161852 1161856 TGATAATGAAGAATT CTTTTCCCTGAAA TTGCT TTTCAGGGAAAAG TTGATTTGATCAGTC TERM 1017 1163716 - 1163670 - f 100 -10.5 -4.29176 | gap 1, opp_overlap 1163672, overlap 1163675 1163699 1163701 AGAGCCAATTTAAAA CAG-ATGTTTTTCTGCCAATTT TTCT AAACTAGCAGAAAAACGTGCTG CTATGCAGGCGCTAC TERM 1018 1163710 - 1163675 - f 89 -13.6 -2.66152 | opp_overlap 1163672, overlap 1163670 1163699 1163701 CAATTTAAAACAGAT GTTTTTCTGCCAATTT TTCT AAACTAGCAGAAAAAC GTGCTGCTATGCAGG TERM 1019 1164819 - 1164803 - g 70 -8.1 -3.65902 | TGGAGGTTATGGAAA TGTTATC AAT GATAACA GCATAGCACCAGCAG BQ09890 1164333 - 1165538 + | omp43 precursor TERM 1020 1165587 - 1165568 - T 77 -3.5 -5.40072 | opp_overlap 1165568 CTTTTTTTAAAAAAA CTGGCGA TCCATG TTGCCAG TTTTTCTTTTTTAAA TERM 1021 1165568 - 1165587 + T 89 -6.4 -5.75538 | opp_overlap 1165568 CTTTTTTTAAAAAAA CTGGCGAT CCAT GTTGCCAG TTTTTCTTTTTTAAA TERM 1022 1166350 - 1166366 + T 74 -2.2 -5.4588 | overlap 1166351 ATTTTAAAGGCTCCC TCTACG AACCA CGTAGC TTTTTTCTCCTTTTC TERM 1023 1166510 - 1166490 - T 89 -6.9 -5.27476 | opp_overlap 1166490 1166488 CTTAACAAAAGAAAA TGGTCATTG TGG CAATGAACA TGTATTTAAATCAAG BQ09900 1167480 - 1166521 - | hypothetical protein BQ09910 1167981 - 1167607 - | hypothetical protein BQ09920 1169069 - 1168794 - | hypothetical protein TERM 1024 1170738 - 1170726 - R 71 -7.7 -3.65036 | overlap 1170720 TTAAGCAAATCAGAA CGCTA AAC TAGCG TGCCAACAGATTGTC TERM 1025 1170959 - 1170928 - R 77 -8.9 -3.56366 | opp_overlap 1170924 1170934, overlap 1170934 AAGAAGGTTTGCAAA CAAAAAGCTGCAC CCGATT GTACAGCTTTTTA TTGGTTTCATGGTTT TERM 1026 1170953 - 1170934 - R 82 -5.7 -5.27335 | opp_overlap 1170934 1170924, overlap 1170928 GTTTGCAAACAAAAA GCTGCAC CCGATT GTACAGC TTTTTATTGGTTTCA TERM 1027 1170934 - 1170953 + r 74 -3.5 -5.24551 | opp_overlap 1170928 1170934, overlap 1170924 GTTTGCAAACAAAAA GCTGCAC CCGATT GTACAGC TTTTTATTGGTTTCA BQ09930 1172075 - 1170990 - | hypothetical protein TERM 1028 1173390 - 1173374 - H 70 -8 -3.18582 | opp_overlap 1173373 1173374 CACCTGACCTATCAA CGTGGT GGTCT ACCACG GTTCTCAGGGAATAC TERM 1029 1174377 - 1174390 + H 70 -4.5 -4.7254 | GTCGTCTTGCGACTT CGCAG AGCC CTGTG TTTTTGGTAAACAGT TERM 1030 1174765 - 1174781 + H 79 -8 -4.08546 | overlap 1174755 1174761 TTGGACTTCCGGCGA GGGAGT CTCTC ACTCCC TTTATCGTTACTCAT TERM 1031 1175746 - 1175761 + H 73 -7.6 -3.78096 | ATCACCCACTTTGGT TCGACT TTCC AGTCGA TTCTACTTTTCTTTC TERM 1032 1176548 - 1176564 + H 81 -10.9 -2.62616 | opp_overlap 1176542 1176538 TCGAACCGACGACCC CCTGCTT GCA AAGCAGG TGCTCTCCCAGCTGA TERM 1033 1177228 - 1177251 + H 95 -12.6 -3.61902 | TAGCGTCATATGCAT GGTTTAAACG GACT CGTTTAAACC TTATGTCTAATCAGA TERM 1034 1178236 - 1178256 + H 82 -9.7 -3.64371 | opp_overlap 1178235 1178232 CAGTATCAAAGGCAG TTCCAGGGT TGA GCCCTGGGA TTTCACCTCTGACTT TERM 1035 1178352 - 1178385 + H 76 -9.6 -2.79452 | opp_overlap 1178355, overlap 1178336 1178351 1178354 1178365 CGCGGCTGCTGGCAC GAAGTTAGCCGGGG CTTCTT CTCCGGTTAACGTC ATTATCTTCACCGGT BQ10010 1179507 - 1179899 + | transcriptional regulator TERM 1036 1180690 - 1180678 - g 77 -6.3 -4.54343 | overlap 1180669 1180689 AGAAAGCCAAACAAA GAGTT TAG AACTC ACGCGTGAAAAAGCA TERM 1037 1180737 - 1180751 + G 73 -8.6 -3.66772 | opp_overlap 1180725 CAACCATTATACGGG CTCCAT TTG ATGGAG TTATTGGAAATTTAA TERM 1038 1181006 - 1180996 - g 76 -6.8 -4.36914 | CCTCCCTCCACAAAA TGCC ACC GGCA ACTTCACCAAAATTG vceA 1180055 - 1181149 + | multidrug resistance protein vceA vceB 1181173 - 1182744 + | multidrug resistance protein vceB BQ10040 1183705 - 1183127 - | acetyltransferase TERM 1039 1183631 - 1183647 + g 71 -9.5 -2.83371 | overlap 1183630 GTCAAGTAAGTGCTC CCGATAA GGC TTATCGG CTTCTTGCTCCAATG odc 1184892 - 1183759 - | ornithine decarboxylase BQ10060 1185169 - 1184927 - | hypothetical protein TERM 1040 1185061 - 1185043 - G 74 -5.2 -4.67353 | opp_overlap 1185046, overlap 1185046 GCATGCAGCGAAAAA CAGCGTGA AAA CCACGTTG CTCTACTTTTTCTGC TERM 1041 1185436 - 1185418 - R 71 -7.5 -3.54575 | overlap 1185416 TGCAAAAAAGCAACA CTTCTCT CAAGC AGAGAAG TCACCTTATCTCCTT TERM 1042 1185493 - 1185480 - R 85 -4.5 -5.61596 | ACCTTCACAAAAAAA CACAC TATT GTGCG ACGAATTCACGATAT TERM 1043 1185909 - 1185891 - R 100 -10.2 -5.23292 | opp_overlap 1185891 TCATACAAAACAAAA GACCGGGC AAT GCCCAGCC TTATAAAACACTTTT TERM 1044 1185969 - 1185941 - R 82 -7.7 -4.56133 | overlap 1185936 CGCTAACAATGAAAA TTCTTTTTTCT TAACAAT AGAAAAAAGAA AAAACTTGAAGCCCC BQ10070 1186915 - 1186001 - | hypothetical protein TERM 1045 1186815 - 1186844 + g 71 -5 -4.5442 | overlap 1186816 1186838 AGAGTACCTTTGATA TCCTTTGCTTGA CATAAA TCTAGCAAAGGC TTTTGTAATTGGCGA TERM 1046 1186816 - 1186843 + g 70 -8.5 -3.3217 | overlap 1186815 1186838 GAGTACCTTTGATAT CCTTTGCTTGA CATAAA TCTAGCAAAGG CTTTTGTAATTGGCG fpr 1188523 - 1187693 - | ferredoxin-NADP reductase TERM 1047 1188877 - 1188867 - H 74 -6.8 -4.36914 | GTCCTCTCTACAAAA CCCT AAG AGGG AGAAAGCCTTTATTA TERM 1048 1189358 - 1189371 + G 90 -3.1 -5.96219 | gap 1, overlap 1189347 CCCGGCACTCTATCG TGCTGG TTG CC-GCA TTTTTTTTGTAGCTC TERM 1049 1190164 - 1190154 - g 73 -2.4 -5.25803 | AATCTTGATAAAAAA CCTC AAA GCGG TGACTGGGTAGAGCT alr 1189167 - 1190285 + | alanine racemase TERM 1050 1190332 - 1190315 - T 76 -4.2 -5.20222 | overlap 1190318 ATCAAAGAAACAAAA GAATGA AAATCA TCATTC TCAGAAAGTACTCTT TERM 1051 1191509 - 1191489 - T 100 -11.9 -4.72386 | opp_overlap 1191489 TAAATGATTCAAAAA GCCCACACA AAA TATGTGGGC TTTTCTCGTCAATGC TERM 1052 1191489 - 1191509 + T 100 -9.7 -4.4767 | opp_overlap 1191489 TAAATGATTCAAAAA GCCCACACA AAA TATGTGGGC TTTTCTCGTCAATGC gcvP 1194332 - 1191537 - | glycine dehydrogenase TERM 1053 1192161 - 1192173 + g 72 -9.1 -3.29576 | overlap 1192160 ACTTCCATAAGGGGC TGCGG AAA CCGCA TGTGTTGTTCCGTTT TERM 1054 1194339 - 1194319 - G 100 -4.7 -5.93809 | TGCCGAGAAAAAAAA GAGCGTTCT TGC ATAACACTC ATCCAATCAATGTTT gcvH 1194706 - 1194338 - | glycine cleavage system protein H gcvT 1195833 - 1194715 - | glycine cleavage system aminomethyltransferase T TERM 1055 1196062 - 1196044 - H 85 -4.6 -5.60864 | CAGATACGAAAAAAA GAAACAAC AAT GTTCTTTC CAATATATTCCGATC TERM 1056 1196476 - 1196490 + H 75 -8.6 -3.35438 | GGAGTTGGCCTTTTT TACCAC TAA GTGGTA TTGTAAACTATGCTC TERM 1057 1196993 - 1196971 - g 70 -5.6 -4.48221 | opp_overlap 1196972, overlap 1196972 CATTAATCGAGAAAA CTTACTCAAC ATT GTTGAGCAAT ATCTTACCATACATG TERM 1058 1196992 - 1196972 - g 72 -9.1 -3.28209 | opp_overlap 1196972, overlap 1196971 ATTAATCGAGAAAAC TTACTCAAC ATT GTTGAGCAA TATCTTACCATACAT lon2 1196549 - 1197211 + | ATP-dependent protease lon BQ10150 1197234 - 1197431 + | hypothetical protein TERM 1059 1197544 - 1197530 - f 85 -8.6 -4.11484 | opp_overlap 1197530 GTGAATTTGTTAAAA GCGTAT TTT ATACGC TCTTGAAAAAACTTG TERM 1060 1197530 - 1197544 + F 71 -8.6 -3.02461 | opp_overlap 1197530 GTGAATTTGTTAAAA GCGTAT TTT ATACGC TCTTGAAAAAACTTG asd 1198870 - 1199901 + | aspartate-semialdehyde dehydrogenase TERM 1061 1200012 - 1200023 + T 73 -7.2 -3.95986 | opp_overlap 1200012 CAGGATAAGTCACAA CGCG GTAG CGCG TTTCGTTGCGTTCAA BQ10180 1200615 - 1199989 - | hypothetical protein TERM 1062 1200838 - 1200859 + r 73 -8.7 -3.29263 | opp_overlap 1200832 AGGAGGTAATCTGAT CGCTTGGCT ATTC AGCCAACCG TTCTCAGCCAACTAT TERM 1063 1201307 - 1201335 + r 77 -5.5 -4.87665 | CGCTGCCGAACAAGC TAAAAAAGTTTAA ATG TTGAACTTGTTTA TTTTTCTGACTACAC TERM 1064 1202156 - 1202142 - R 77 -8.6 -3.66803 | TGTGAATATTTCAAA TCTGTC AGA GACAGA ATGAGCACCTTACCG TERM 1065 1202287 - 1202266 - R 80 -2.9 -5.72622 | GGTATAAACAAAAAA CAACGCCAC AAAC GTGCCCTTG AACTCATTGCATAGG nodN 1204083 - 1203616 - | nodulation protein n TERM 1066 1203912 - 1203923 + g 89 -5.8 -5.51165 | overlap 1203915 CATGAGCGATAGTGC CACC AAAA GGTG TTTTTTTAGCCTTTT TERM 1067 1205182 - 1205192 + G 71 -6.8 -3.98804 | opp_overlap 1205182 1205181 GAAGATTTAAAAATG GGTC AGG GACC TTATTTCACCTTTCA BQ10230 1204252 - 1205589 + | hypothetical protein BQ10250 1206771 - 1206397 - | hypothetical protein TERM 1068 1206516 - 1206506 - G 73 -5.4 -4.54205 | AGTACATTAAATAAA GAGA CTT TCTC AACTTTTCCAAAAGC TERM 1069 1206793 - 1206779 - H 70 -4.3 -4.65895 | opp_overlap 1206764 TTCTTCACTGAAAAA GTGAA AAATA TTCAC ATAGCTAAAAAATAA TERM 1070 1206885 - 1206865 - H 71 -8.5 -3.07534 | opp_overlap 1206867 1206870, overlap 1206867 1206870 1206874 TATATTATAGAGATA TATAATACA TTA TGTATTATA TGTAAATACATAAAA BQ10260 1208286 - 1209026 + | hypothetical protein TERM 1071 1210482 - 1210500 + T 100 -14.6 -3.65529 | opp_overlap 1210482 TTTATAAATAAAAAA GGCAGCAC ACT GTGCTGCC TTTAGATCAAAGTCT TERM 1072 1210500 - 1210482 - T 100 -14.6 -5.72622 | opp_overlap 1210482 TTTATAAATAAAAAA GGCAGCAC ACT GTGCTGCC TTTAGATCAAAGTCT BQ10280 1213575 - 1210540 - | hypothetical protein TERM 1073 1211264 - 1211250 - G 71 -6.4 -4.25104 | TTGTTTTGAGTAAAA CACCTG CCT CAAGTG CATTATAACCAAGCT TERM 1074 1213767 - 1213732 - R 78 -2.1 -5.60993 | gap 1, opp_overlap 1213752 1213757, overlap 1213750 CTCGCGACAAAAAAA CTTATA-AGTGAATAA TCATT TTACACACTTTATAAG TGTATAATACATTCT TERM 1075 1214145 - 1214163 + r 100 -14.6 -3.65529 | opp_overlap 1214145 TTTATAAATAAAAAA GGCAGCAC ACT GTGCTGCC TTTAGATCAAAGTCT TERM 1076 1214163 - 1214145 - R 100 -14.6 -5.72622 | opp_overlap 1214145 TTTATAAATAAAAAA GGCAGCAC ACT GTGCTGCC TTTAGATCAAAGTCT BQ10290 1219821 - 1214203 - | surface protein TERM 1077 1214927 - 1214913 - G 71 -6.4 -4.25104 | TTGTTTTGAGTAAAA CACCTG CCT CAAGTG CATTATAACCAAGCT TERM 1078 1217696 - 1217677 - G 75 -5.7 -4.68593 | TTTAGGATCGAAAAA CTTCGAG GCTGAA CCCGAAG AAGATACTTGACGAG TERM 1079 1218347 - 1218336 - G 81 -5.8 -5.16071 | AATCATGAACAAAAA CCGA AAGA TCGG AACCAGCTTCAGCTT TERM 1080 1220065 - 1220086 + G 76 -7.4 -4.25283 | AACTTCTGTCTTGGC TGTTGCAA TTAGCT TTGCAACA TTTTCGTGGGCAAGT fatB 1220060 - 1220959 + | ferric anguibactin-binding protein TERM 1081 1221924 - 1221966 + G 79 -3.6 -5.3658 | gap 1, opp_overlap 1221934, overlap 1221933 1221934 GAATAATTCATCCTT CTCTTGA-AATTCCCATCA GCACCA TGATGGGGGTTATTGGGAG TTTTATTTTTATCAT fatD 1221059 - 1222015 + | ferric anguibactin transport system permease protein fatC 1222083 - 1222958 + | ferric anguibactin transport system permease protein ceuD 1222955 - 1223713 + | Iron compound ABC transporter BQ10350 1225785 - 1224781 - | hypothetical protein TERM 1082 1225447 - 1225431 - G 79 -8.7 -4.12456 | AGAGCATTCTTAAAA CTGCACT GAG AGCGCAG GCATCTTGATAAAAA TERM 1083 1226647 - 1226630 - H 71 -5.6 -4.64766 | CGCACATGCTAAAAA CCTTGA AGTTGG TCAAGG GAAAACAGCAATACC TERM 1084 1228504 - 1228516 + H 73 -7.7 -3.88137 | opp_overlap 1228504, overlap 1228514 ACAGAGTTTGAACCA CAAGC ACA GCTTG TTTATCAACAATTGT TERM 1085 1228645 - 1228627 - H 73 -4.6 -4.92385 | overlap 1228628 GACATTTAAACAAAA CTGTTTCC GCT GAAAACAA CCATTCCTTTTCCTT TERM 1086 1229593 - 1229575 - g 72 -4.6 -4.7173 | opp_overlap 1229575 1229576, overlap 1229576 GATTAGACTTAAAAA TTCAGAAA TTC TTTCTGAT ATATTATTGAAAAAT TERM 1087 1229984 - 1229973 - g 80 -4.4 -5.27477 | ACCTCAATGAAAAAA CAGT CTAC ACTG CGACAGGTGATGCAA TERM 1088 1230414 - 1230395 - g 70 -5.8 -4.33653 | gap 1 GAGGCAAAAATCAAA GCT-CTTGT GCC ACAAGTAGC AAGCTATTTGGTGAT TERM 1089 1230514 - 1230495 - g 72 -9.4 -3.01001 | CATTGTTAAACGATA TGCAAACA GCAC TGTTTGCA CCAGAAAGTCATAAA BQ10380 1229054 - 1231357 + | hypothetical protein TERM 1090 1231355 - 1231387 + F 100 -16.5 -2.88427 | opp_overlap 1231362, overlap 1231357 1231362 ATACACTATGGCTTT TAAAAAAGGCAGCAC ATT GTGCTGCCTTTTGTA TATATGAAACCTGTT TERM 1091 1231357 - 1231385 + F 95 -14.7 -2.9914 | opp_overlap 1231362, overlap 1231355 1231362 ACACTATGGCTTTTA AAAAAGGCAGCAC ATT GTGCTGCCTTTTG TATATATGAAACCTG TERM 1092 1231362 - 1231380 + F 100 -14.6 -4.64844 | opp_overlap 1231362, overlap 1231357 1231355 ATGGCTTTTAAAAAA GGCAGCAC ATT GTGCTGCC TTTTGTATATATGAA TERM 1093 1231380 - 1231362 - f 100 -14.6 -5.00884 | opp_overlap 1231362 1231357 1231355 ATGGCTTTTAAAAAA GGCAGCAC ATT GTGCTGCC TTTTGTATATATGAA TERM 1094 1233908 - 1233920 + F 73 -7.7 -3.88137 | opp_overlap 1233908, overlap 1233918 ACAGAGTTTGAACCA CAAGC ACA GCTTG TTTATCAACAATTGT TERM 1095 1234049 - 1234031 - f 73 -4.6 -4.92385 | overlap 1234032 GACATTTAAACAAAA CTGTTTCC GCT GAAAACAA CCATTCCTTTTCCTT TERM 1096 1234242 - 1234230 - f 71 -3.3 -5.16472 | AAAAACTGCAAAAAA CCGGT ATA ACGGG AGCAAGTTTTACCTA TERM 1097 1234331 - 1234349 + F 100 -9.6 -5.04601 | opp_overlap 1234331 1234333 CGTTTTAACAAAAAA GGCAGCAT ACT ATGCTGTC TTTTTAATTTATAAA TERM 1098 1234349 - 1234331 - f 93 -7.4 -5.4505 | opp_overlap 1234331, overlap 1234333 CGTTTTAACAAAAAA GGCAGCAT ACT ATGCTGTC TTTTTAATTTATAAA TERM 1099 1235031 - 1235044 + F 70 -3.9 -4.85599 | overlap 1235024 AATAAAACTGTCTCA TAGAT ATTT ATCTA TTTTTATGCCATAGA TERM 1100 1235200 - 1235156 - f 100 -10.5 -5.5112 | opp_overlap 1235163 1235166, overlap 1235157 1235160 CTGATGAATAAAAAA TTCACAATAATATTAACATTT ACA AAATATTAATATTATTGTAGA TAAATAAATACTAAT TERM 1101 1235200 - 1235157 - f 90 -11.6 -3.89587 | gap 1, opp_overlap 1235163 1235166, overlap 1235156 1235160 TGATGAATAAAAAAT TC-ACAATAATATTAACATTT ACA AAATATTAATATTATTGTAGA TAAATAAATACTAAT TERM 1102 1235196 - 1235160 - f 90 -13.5 -2.99438 | opp_overlap 1235163 1235166, overlap 1235156 1235157 TGAATAAAAAATTCA CAATAATATTAACATTT ACA AAATATTAATATTATTG TAGATAAATAAATAC TERM 1103 1237294 - 1237283 - g 76 -4.4 -5.16038 | ACACAACAAACAAAA CAGT CTAC ACTG CGACAGGTGATGCAA TERM 1104 1237724 - 1237705 - g 70 -5.8 -4.33653 | gap 1 GAGGCAAAAATCAAA GCT-CTTGT GCC ACAAGTAGC AAGCTATTTGGTGAT TERM 1105 1237824 - 1237805 - g 72 -9.4 -3.01001 | CATTGTTAAACGATA TGCAAACA GCAC TGTTTGCA CCAGAAAGTCATAAA BQ10410 1235401 - 1238667 + | hypothetical protein TERM 1106 1238665 - 1238697 + T 100 -16.5 -2.88427 | opp_overlap 1238672, overlap 1238667 1238672 ATACACTATGGCTTT TAAAAAAGGCAGCAC ATT GTGCTGCCTTTTGTA TATATGAAACCTGTT TERM 1107 1238667 - 1238695 + T 95 -14.7 -2.9914 | opp_overlap 1238672, overlap 1238665 1238672 ACACTATGGCTTTTA AAAAAGGCAGCAC ATT GTGCTGCCTTTTG TATATATGAAACCTG TERM 1108 1238690 - 1238672 - T 100 -14.6 -5.00884 | opp_overlap 1238667 1238665 1238672 ATGGCTTTTAAAAAA GGCAGCAC ATT GTGCTGCC TTTTGTATATATGAA TERM 1109 1238672 - 1238690 + T 100 -14.6 -4.64844 | opp_overlap 1238672, overlap 1238667 1238665 ATGGCTTTTAAAAAA GGCAGCAC ATT GTGCTGCC TTTTGTATATATGAA TERM 1110 1240733 - 1240722 - T 76 -3.6 -5.24531 | overlap 1240724 ACCTCCCATAAAAAA GAGG CGTT CCCC CACGACGCAAGAAGC BQ10440 1241445 - 1241044 - | hypothetical protein TERM 1111 1242019 - 1242004 - H 76 -4 -5.30189 | overlap 1242016 GACAACATCAAAAAA GCTATC TAAA AATAGC TAAACAGCCACAGAT BQ10450 1242629 - 1243012 + | hypothetical protein TERM 1112 1243168 - 1243186 + F 82 -7.5 -4.63863 | opp_overlap 1243168 TTCTACCTTGAATTA TCACTCT TCCTC AGAGTGA TTCTTTTTATCTTCC BQ10460 1244403 - 1244732 + | hypothetical protein ribF 1245948 - 1244980 - | bifunctional riboflavin kinase/FMN adenylyltransferase BQ10480 1246826 - 1245981 - | hypothetical protein TERM 1113 1247828 - 1247810 - R 74 -6.7 -4.30885 | opp_overlap 1247803 AAAATACAGTCAAAA GGCCAGA AATTG TCTAGCC ATATTGACATTTCAC TERM 1114 1248183 - 1248155 - R 85 -10.3 -3.50393 | opp_overlap 1248154 TGTTATTTTACACAA GCCACGCAGTG ACAAAAG CACCGCATGGC CATTTCATACCATTG BQ10500 1248896 - 1248573 - | hypothetical protein BQ10510 1249339 - 1249136 - | hypothetical protein BQ10520 1250083 - 1249340 - | hypothetical protein TERM 1115 1249463 - 1249475 + g 91 -7.7 -5.25772 | opp_overlap 1249460, overlap 1249460 AGCACTATGATACTG TCCTG GAA CAGGA TTTTTATTCTCCTTT TERM 1116 1250235 - 1250225 - H 70 -4 -4.84359 | opp_overlap 1250229 1250230, overlap 1250230 TCATTTTGATAAAAA TAGT ACA ACTA ATAGTTGCTTAATTA TERM 1117 1250474 - 1250492 + G 71 -7.4 -3.88946 | ATTTTTATCGTTATC GTGCTGCT GTT AACAGCAC TTGTTGTATCAAATC virB2 1250432 - 1250746 + | virB2 protein TERM 1118 1251003 - 1250986 - g 100 -6.9 -6.11229 | AGGAAAACAAAAAAA CCTCACC AGAT GGGGAGG AGGATCTACATCTCC virB3 1250747 - 1251058 + | virB3 protein TERM 1119 1251383 - 1251372 - g 78 -3 -5.36364 | TGAAAAATACAAAAA GAAA ATGG TTTC GCAAGAGCTGTATAG TERM 1120 1251649 - 1251680 + G 71 -9.4 -2.85574 | overlap 1251648 TTTCTACACCAGTTA GTGGGAGGAAGGCG TGAG CGGATTCCTCTCAC ATTTGGTACCATTGC virB4 1251064 - 1253418 + | virB4 protein TERM 1121 1253667 - 1253652 - g 78 -7.6 -4.42765 | opp_overlap 1253651 GCTGAAAAAACCAAA CCTGAA GAAT TTCAGG CTCTTCAAATAGAGC BQ10560 1253415 - 1253861 + | 17-kDa antigen precursor virB6 1253848 - 1254813 + | virB6 protein TERM 1122 1254851 - 1254886 + F 87 -12.6 -3.08679 | ACGAGGGTTCTTGTT TTTGCATTGCGCGCGC TAGA GAGCGCGCAATGTACA TATTGCGTGAAACAG TERM 1123 1255141 - 1255125 - g 79 -5.1 -5.00884 | AGTGGGCCCAAAAAA CCACCAC GAT GTAATGG CCAGTATACGCGCGC BQ10580 1255047 - 1255361 + | 15-kDa antigen protein virB8 1255351 - 1256019 + | virB8 protein TERM 1124 1256488 - 1256475 - g 70 -8.1 -3.75898 | overlap 1256451 1256485 AAGAAATTAGCCAAA GCAGC AGAA GCTGC ACAGCGTGAAGAAAA virB9 1256019 - 1256885 + | virB9 protein TERM 1125 1257094 - 1257077 - g 83 -9.1 -3.97042 | CGATTATTAAGCAAA CAGAGCG TTTC CGCCCTG CACAGCCCAAGCCTG virB10 1256875 - 1258032 + | virB10 protein virB11 1258029 - 1259099 + | virB11 protein TERM 1126 1259214 - 1259191 - f 70 -3.8 -4.88495 | overlap 1259186 1259179 1259177 1259193 AGAGATAGAAGAAAA TTTTTCGTCG ATCA CGCCGAAAGA ATTGGAAAAGCGCCG TERM 1127 1259905 - 1259917 + F 71 -3.3 -5.03747 | opp_overlap 1259899, overlap 1259915 AGAAGGCAATGAGCG CACCC AAC GGTTG TTTTTTCAACAATTT TERM 1128 1260428 - 1260444 + F 75 -7.3 -4.18094 | AAGTCTCCACACTCT CTTGCAA ATC TTGCAGG TTTTGACCTCATTTG TERM 1129 1262970 - 1262953 - g 90 -8.5 -4.92812 | TTAGAAGAAAAGAAA TGTTAGC CGCT GCTAACA AAAACCGTTTTGCTC traG 1261086 - 1263005 + | conjugal transfer protein traG TERM 1130 1263021 - 1263010 - f 74 -2.2 -5.56112 | AGAAAAATTAAAAAA CACC CTAC GATG AATTTGAACATCAAA TERM 1131 1263351 - 1263330 - f 83 -7.5 -4.75404 | AAAGTTTAGGAAAAA TTATCATTT GTGA AAATGATAA ACAAAAGTTGAGAAT TERM 1132 1263671 - 1263659 - g 79 -5.5 -4.84359 | TTATTTTTATAAAAA CAGCG CAA CACTG AAGAATAAACATGGC TERM 1133 1264683 - 1264669 - g 71 -7.2 -3.79445 | overlap 1264672 AAGCATTAAGCCAAA TGATTG AGA CAATCA ACATAGATCCAAGTT BQ10650 1263630 - 1265231 + | putative cell filamentation protein TERM 1134 1267050 - 1267033 - g 77 -9.9 -3.58533 | overlap 1267024 1267042 GCAGAATTCGGGAAA CGAAAGC AATA GCTTTCG CCAGCTAAGCGTGCA BQ10660 1265556 - 1267058 + | hypothetical protein TERM 1135 1267549 - 1267539 - g 79 -5.4 -4.89567 | CTCCAAAAGACAAAA GACA GCC TGTC TCGAAACTGGAAGAA TERM 1136 1267620 - 1267608 - g 80 -7.7 -4.3767 | opp_overlap 1267611 TTACACCAGAACAAA GCTTG CTA CAAGC ACTTCTCTACCCAAC TERM 1137 1268321 - 1268308 - g 74 -4.5 -4.96388 | AACGATTAAAGAAAA CCCCA TGTT TGGAG AACAGCTCTCATGGG BQ10670 1267412 - 1269157 + | hypothetical protein TERM 1138 1271121 - 1271108 - g 70 -8.1 -3.74747 | opp_overlap 1271118, overlap 1271097 GCAAGCTTTATCAAA GCAGC CTAA GCTGC CTGAGCATTCAGCAG BQ10680 1269465 - 1271246 + | hypothetical protein TERM 1139 1272182 - 1272167 - f 81 -7.6 -4.38313 | overlap 1272160 ACACTAAACTGAAAA GCTTCT TTAC AGAAGC GATACAAAATACATC TERM 1140 1273838 - 1273818 - g 70 -2.5 -5.10968 | overlap 1273820 ATGAAGATACAAAAA CACCAATGA TTT TCACAGGTA TTTGCGTTTTTATCA mviN 1272665 - 1274236 + | virulence factor mviN-like protein TERM 1141 1275177 - 1275187 + G 70 -5.4 -4.36914 | opp_overlap 1275177 TAAGCAAAGAAAAGG CTCT TTT AGAG TTTTCTGGAAAACAA trpS 1274330 - 1275400 + | tryptophanyl-tRNA synthetase BQ10710 1275462 - 1275953 + | hypothetical protein BQ10720 1276010 - 1276588 + | hypothetical protein TERM 1142 1276715 - 1276737 + T 71 -9 -3.05844 | opp_overlap 1276712 TTTACCTCAATATGC GGGGAGCCTG TGC CAGACGCCCC TCTTCAACTGCAACG TERM 1143 1277240 - 1277255 + T 81 -8.2 -4.24432 | opp_overlap 1277228 1277240, overlap 1277235 ATTGTACAAAAAAAA CGGGCT CAGT GGCCCG TTTCCTTTTACCTTT TERM 1144 1277255 - 1277240 - T 100 -7.5 -5.94713 | opp_overlap 1277240 1277235, overlap 1277228 ATTGTACAAAAAAAA CGGGC TCAGTG GCCCG TTTCCTTTTACCTTT groEL 1278924 - 1277281 - | chaperonin GroEL groES 1279281 - 1278985 - | co-chaperonin GroES TERM 1145 1279160 - 1279170 + g 70 -3.2 -4.89009 | ACAGCAATAATTTCA CCTT CTT GAGG TTTTTCCTTAGCTGT fumC 1279505 - 1280893 + | fumarate hydratase TERM 1146 1280959 - 1280936 - T 87 -11 -3.40522 | opp_overlap 1280938, overlap 1280938 ACCTCTCCATTAGAA TATCGGACCG CAAG CGGTCCGATT CTTATTGGATCTTAA TERM 1147 1280957 - 1280938 - T 93 -13.6 -3.27475 | opp_overlap 1280938, overlap 1280936 CTCTCCATTAGAATA TCGGACCG CAAG CGGTCCGA TTCTTATTGGATCTT TERM 1148 1280938 - 1280957 + T 100 -13.6 -3.98981 | opp_overlap 1280938 1280936 CTCTCCATTAGAATA TCGGACCG CAAG CGGTCCGA TTCTTATTGGATCTT pgm 1283200 - 1281572 - | phosphoglucomutase TERM 1149 1281995 - 1282017 + g 73 -7 -4.28254 | ATAAGTGTGCCAATG CTGTTGCGTA ATT TGTGCGACAG TTTTCCCTGTTACCG TERM 1150 1282152 - 1282124 - G 70 -5.4 -4.46212 | TTCTTCACCACAAAA GGTCACTTTT CCAGCATCT AAAAGCGACC CAAAAAATTTCCATC BQ10800 1283399 - 1283923 + | hypothetical protein TERM 1151 1283988 - 1283953 - T 79 -9.2 -3.48593 | CACTCGTTTAGATAA CTGTACAAATTCCT TCGCAAAG AGGAATTTGTACCG AAAACGTGAGAAATC hisS 1287150 - 1285654 - | histidyl-tRNA synthetase TERM 1152 1286010 - 1286024 + g 71 -4.2 -4.86731 | CCATCATCAGCACCA CAACTG GCC CAGGTG TTTTCTTTACAGGCA TERM 1153 1286038 - 1286063 + g 72 -9.1 -3.30124 | TGTTTTCTTTACAGG CAGCTTTGAAA GATT TTGCAAAGCTG TTATCAAGCGTGAGA TERM 1154 1286780 - 1286790 + g 74 -4.6 -4.8622 | AATTGCCGAAACCGC CCTG GTC CGGG TTTTTCATTACGGAA TERM 1155 1286841 - 1286813 - G 72 -3.1 -5.10933 | opp_overlap 1286836 TTACGGAAAACAAAA CCAAGACGATAAC TCC GATATGGTTTTGG CAAAATTTCAAAATT TERM 1156 1287573 - 1287551 - R 77 -10 -3.04944 | overlap 1287549 1287548 1287546 1287554 AACAAGAAAATATCA CAAGACCAAA CAG TTTAGTCTTG CACCAATATTGTTTT pyrF 1288854 - 1288009 - | orotidine 5-phosphate decarboxylase TERM 1157 1289452 - 1289440 - R 71 -7.7 -3.65036 | overlap 1289434 TTAAGCAAATCAGAA CGCTA AAC TAGCG TGCCAACAGATTGTC TERM 1158 1289673 - 1289642 - R 77 -8.9 -3.56366 | opp_overlap 1289638 1289648, overlap 1289648 AAGAAGGTTTGCAAA CAAAAAGCTGCAC CCGATT GTACAGCTTTTTA TTGGTTTCATGGTTT TERM 1159 1289667 - 1289648 - R 82 -5.7 -5.27335 | opp_overlap 1289648 1289638, overlap 1289642 GTTTGCAAACAAAAA GCTGCAC CCGATT GTACAGC TTTTTATTGGTTTCA TERM 1160 1289648 - 1289667 + r 74 -3.5 -5.24551 | opp_overlap 1289642 1289648, overlap 1289638 GTTTGCAAACAAAAA GCTGCAC CCGATT GTACAGC TTTTTATTGGTTTCA BQ10850 1290789 - 1289704 - | hypothetical protein TERM 1161 1292104 - 1292088 - H 70 -8 -3.18582 | opp_overlap 1292087 1292088 CACCTGACCTATCAA CGTGGT GGTCT ACCACG GTTCTCAGGGAATAC TERM 1162 1293091 - 1293104 + H 70 -4.5 -4.7254 | GTCGTCTTGCGACTT CGCAG AGCC CTGTG TTTTTGGTAAACAGT TERM 1163 1293479 - 1293495 + H 79 -8 -4.08546 | overlap 1293469 1293475 TTGGACTTCCGGCGA GGGAGT CTCTC ACTCCC TTTATCGTTACTCAT TERM 1164 1294460 - 1294475 + H 73 -7.6 -3.78096 | ATCACCCACTTTGGT TCGACT TTCC AGTCGA TTCTACTTTTCTTTC TERM 1165 1295262 - 1295278 + H 81 -10.9 -2.62616 | opp_overlap 1295256 1295252 TCGAACCGACGACCC CCTGCTT GCA AAGCAGG TGCTCTCCCAGCTGA TERM 1166 1295942 - 1295965 + H 95 -12.6 -3.61902 | TAGCGTCATATGCAT GGTTTAAACG GACT CGTTTAAACC TTATGTCTAATCAGA TERM 1167 1296950 - 1296970 + H 82 -9.7 -3.64371 | opp_overlap 1296949 1296946 CAGTATCAAAGGCAG TTCCAGGGT TGA GCCCTGGGA TTTCACCTCTGACTT TERM 1168 1297066 - 1297099 + H 76 -9.6 -2.79452 | opp_overlap 1297069, overlap 1297050 1297065 1297068 1297079 CGCGGCTGCTGGCAC GAAGTTAGCCGGGG CTTCTT CTCCGGTTAACGTC ATTATCTTCACCGGT TERM 1169 1298466 - 1298485 + G 71 -7.2 -3.8062 | TACAGGAACAGTTCT TACGGGAA TCAC TTCCTGTA TTCTTATGGGGATTG TERM 1170 1298784 - 1298794 + G 73 -5.4 -4.60889 | CTATCCTAAATTTGA TGCT TTA AGCA TTTTTGAGAGTGATT TERM 1171 1299202 - 1299181 - g 76 -3.1 -5.28176 | gap 1 CCTATTCAGAAAAAA CAAAAGC-TC ATC GATGCTTTTA AAAAAACCAACTATA TERM 1172 1299864 - 1299845 - g 77 -5 -4.93968 | overlap 1299847 ATTCAGAAGGAAAAA GCGCAAAA CCTT TTTTGCTC CGAAACCCCACTCCA BQ10930 1298350 - 1300356 + | hypothetical protein BQ10950 1302571 - 1301114 - | hypothetical protein TERM 1173 1301601 - 1301589 - G 84 -10.5 -3.85909 | opp_overlap 1301586 TCACTTAAACGCAAA CGGCG ATG CGCCG TGGATATTGTCTGGA TERM 1174 1301772 - 1301785 + g 72 -4.5 -4.67904 | overlap 1301757 TGCCGTTCTTTCTCG GCATG ATTG CGTGC TTTTTCCAATTCCTG TERM 1175 1302276 - 1302288 + g 81 -6.9 -4.67353 | overlap 1302277 AAGCGCGCTCTGTCT TCCGC CTT GCGGG TTTTTGCATAGCTAC TERM 1176 1302746 - 1302736 - R 71 -3.2 -5.08831 | GAATAAAAAAAACAA GGCT TTT AACC ATAATTATTATGCTT sigH 1303319 - 1302825 - | RNA polymerase sigma factor TERM 1177 1303268 - 1303258 - G 79 -6.8 -4.56802 | overlap 1303252 AAAGAAATAGCAAAA GCTC GCA GAGC TGGTAGAACCAAAAG BQ10970 1303531 - 1303328 - | hypothetical protein TERM 1178 1303648 - 1303629 - H 86 -10.8 -3.27215 | opp_overlap 1303631 1303633 1303642 AAAGTTCCATACGAA CAGAGGAA CTTT TTCCTCTG TTGAGGATTTCAATC BQ10980 1303700 - 1304494 + | two-component response regulator BQ10990 1304515 - 1305528 + | sensory transduction histidine kinase TERM 1179 1305545 - 1305533 - T 83 -6.3 -5.00616 | opp_overlap 1305516 1305533 TTTTTTTTTAAAAAA GTGTT TAA AACAC TTTAGAATGAAAAAG BQ11000 1306511 - 1305771 - | hypothetical protein TERM 1180 1305805 - 1305818 + g 71 -3.7 -4.87328 | opp_overlap 1305804 GAAGATGTCATAACC CGGCG CCGA CGCGG TTTTCTCTTTATCTC BQ11010 1306997 - 1306737 - | hypothetical protein fdhE 1307339 - 1308280 + | hypothetical protein TERM 1181 1308337 - 1308367 + T 100 -18.4 -2.87564 | opp_overlap 1308331 CTTTAGAGAGCCCCT TTCCCGGCAGCTGT GTA ACAGCTGCCGGAAA TCTATGGAGCAGTGA BQ11030 1309402 - 1308956 - | hypothetical protein TERM 1182 1309901 - 1309880 - H 71 -6.7 -4.27297 | overlap 1309898 AAGAGAAGAGATAAA GCTCTTTTT TTAA AAAAAGAAC GAGACATCATCAGAA TERM 1183 1309933 - 1309898 - H 83 -4.8 -5.40072 | opp_overlap 1309902, overlap 1309880 1309901 1309902 CTTTTTTTAAAAAAA GAACGAGACATCATCA GAAG TGATGATATCCCTTTG CAATGCTTTATTAGA TERM 1184 1309930 - 1309901 - H 80 -6.5 -4.79949 | opp_overlap 1309902, overlap 1309898 1309902 TTTTTAAAAAAAGAA CGAGACATCATCA GAAG TGATGATATCCCT TTGCAATGCTTTATT TERM 1185 1309929 - 1309902 - H 81 -10 -3.46885 | opp_overlap 1309902, overlap 1309901 1309898 TTTTAAAAAAAGAAC GAGACATCATCA GAAG TGATGATATCCC TTTGCAATGCTTTAT BQ11040 1310858 - 1311226 + | hypothetical protein BQ11050 1311277 - 1311729 + | hypothetical protein TERM 1186 1312377 - 1312336 - T 73 -7.5 -3.85698 | opp_overlap 1312348 1312350, overlap 1312350 TCTTTTCTTGACAAA TTCTTCTTCCAAAAGGCAA AATA TTGCCTCTTTGAATAAAAA AGAGAAAGACTTCCT TERM 1187 1312664 - 1312676 + T 80 -6.3 -4.67038 | overlap 1312649 GAAACAATTTTTTGT CTCTT GTT AAGAG TTTTAGTTTTCACGC BQ11060 1313657 - 1312686 - | 35 kDa protein BQ11070 1314778 - 1313654 - | hypothetical protein TERM 1188 1313700 - 1313688 - G 70 -3.3 -4.86862 | TGTAAAAAACGAAAA CGAGC AAA GATCG AAGAAAGAAAGCGAA BQ11080 1315233 - 1314775 - | hypothetical protein TERM 1189 1315311 - 1315325 + r 79 -5.7 -5.20328 | ATTGTTTTCTTATGC GCTGT GCTTA ACAGC TTTCTTTTTTTAAGA BQ11090 1316866 - 1315406 - | hypothetical protein BQ11100 1317830 - 1317135 - | hypothetical protein TERM 1190 1317675 - 1317654 - G 75 -2.9 -5.33405 | overlap 1317655 TTTATTAAAGAAAAA GGGTTCGCG TTCA CACAAACGC AAAGCGGTAAGAATG TERM 1191 1317913 - 1317936 + r 77 -9 -3.57883 | gap 1, opp_overlap 1317913 1317915, overlap 1317915 TGTTGAGAAGAAGAA G-AGGAAAGCT TGC AGCTTTCCTGC TTTGAAAAGTGTTCT TERM 1192 1317935 - 1317913 - R 85 -9.2 -4.02817 | opp_overlap 1317913 1317915, overlap 1317915 TGTTGAGAAGAAGAA GAGGAAAGCT TGC AGCTTTCCTG CTTTGAAAAGTGTTC TERM 1193 1317933 - 1317915 - R 91 -11.8 -3.60364 | opp_overlap 1317913 1317915, overlap 1317913 TTGAGAAGAAGAAGA GGAAAGCT TGC AGCTTTCC TGCTTTGAAAAGTGT TERM 1194 1317915 - 1317933 + r 84 -11.8 -2.91322 | opp_overlap 1317915 1317913, overlap 1317913 TTGAGAAGAAGAAGA GGAAAGCT TGC AGCTTTCC TGCTTTGAAAAGTGT BQ11110 1319106 - 1317988 - | hypothetical protein TERM 1195 1319154 - 1319138 - R 86 -5.7 -5.65927 | opp_overlap 1319139, overlap 1319139 TATTGAAATAAAAAA GCCGGCA AAA CGCCGGT TATTGACATTCCCCA TERM 1196 1319139 - 1319153 + r 77 -8.5 -3.68222 | opp_overlap 1319138 1319139 ATTGAAATAAAAAAG CCGGC AAAAC GCCGG TTATTGACATTCCCC TERM 1197 1319153 - 1319139 - R 85 -9.2 -3.9793 | opp_overlap 1319139, overlap 1319138 ATTGAAATAAAAAAG CCGGCA AAA CGCCGG TTATTGACATTCCCC BQ11120 1320319 - 1319525 - | hypothetical protein BQ11130 1322260 - 1320416 - | hypothetical protein BQ11140 1323453 - 1322245 - | phage related protein TERM 1198 1324319 - 1324305 - R 70 -4.2 -4.72643 | overlap 1324308 CAGCAAAAAAAAACA CCATGA TCC TCAAGG ACCCTATGCCCAAGA BQ11160 1324738 - 1324424 - | hypothetical protein TERM 1199 1324544 - 1324530 - G 72 -8.6 -3.60792 | overlap 1324538 CCGGTAACCTGTAAA GGCAAA ATC TTTGCC AAAAGCGAAAAAAAA clpB 1327913 - 1325274 - | ATP-dependent Clp protease, ATP-binding subunit clpB TERM 1200 1326022 - 1326033 + g 70 -5.8 -4.4261 | opp_overlap 1326021, overlap 1326017 TCAGACATATCAATG CGCA ACAT TGCG TTTTGGTCTTGAAAG BQ11180 1328859 - 1328557 - | zinc-binding protein maf-2 1329569 - 1328886 - | septum formation maf protein TERM 1201 1329353 - 1329365 + g 70 -3.3 -4.98531 | ATAGAAAAGTTTCTT GCGCT TTA AGGGC TTTTTCCTTTGCCAA infA 1330011 - 1329793 - | translation initiation factor IF-1 TERM 1202 1330123 - 1330135 + r 72 -2.7 -5.24799 | AAATTCAATGGAAAG GAAAG GGT TTTTC TTTTTGTATTTGTGC TERM 1203 1331254 - 1331197 - R 100 -18.7 -4.08064 | opp_overlap 1331212, overlap 1331212 AATTTGCTCTCAAAA GCTTTTGTAAAAAAAGAGGCAGCGCTC TTGA AAGCGCTGCCTCTTTGCTTACAATATC AAGATATACAAATAG TERM 1204 1331212 - 1331239 + r 100 -17.1 -3.92625 | opp_overlap 1331197 1331212 GCTTTTGTAAAAAAA GAGGCAGCGCT CTTGAA AGCGCTGCCTC TTTGCTTACAATATC TERM 1205 1331239 - 1331212 - R 100 -17.8 -5.40072 | opp_overlap 1331212, overlap 1331197 GCTTTTGTAAAAAAA GAGGCAGCGCTC TTGA AAGCGCTGCCTC TTTGCTTACAATATC BQ11210 1331869 - 1331288 - | hypothetical protein BQ11240 1333132 - 1332542 - | hypothetical protein TERM 1206 1332871 - 1332856 - G 90 -9 -4.84359 | TGATCTGTAGAAAAA TCTGCC TTGC GGCAGA GATACAGATTACCAT TERM 1207 1333217 - 1333227 + H 90 -4 -5.78622 | opp_overlap 1333217 AAACGGCCCAGAAAG CATA ACT TATG TTTTTTTTGCCATAG TERM 1208 1333935 - 1333959 + H 100 -17.3 -3.53012 | opp_overlap 1333930 1333931 1333956 AACCAGACAAGTTCC GCTCTTCTGCT CGA AGCAGAAGAGC TTTCAGCCCGAAGAA purE 1335237 - 1335734 + | phosphoribosylaminoimidazole carboxylase I TERM 1209 1336326 - 1336304 - g 86 -7.1 -5.1101 | overlap 1336319 CTATGATGGAAAAAA TCAGATGAT GCTAA ATCATCCGA AGGAAGAAGCCATAG TERM 1210 1336382 - 1336396 + G 75 -2.8 -5.24531 | ACAGCCGTCGATTTT GGAAGA GAT TGTTCC TTTTTTATCGGAGAT purK 1335753 - 1336931 + | phosphoribosylaminoimidazole carboxylase ATPase subunit BQ11300 1337002 - 1337394 + | hypothetical protein TERM 1211 1337947 - 1337968 + F 93 -8.8 -4.74012 | TGAAATGTGTTAATC CGTACCTT TATTGT AAGGTACG TTTTGCTTTTATAAT rpmJ 1338147 - 1338272 + | 50S ribosomal protein L36 TERM 1212 1338486 - 1338504 + G 75 -8.2 -4.05033 | overlap 1338478 1338477 TTTTTCATTGCTTTT GTAAGCAA CTT TTGCTTGC TTTCTCTCGGATACG TERM 1213 1338643 - 1338655 + G 71 -6.3 -4.18018 | CTGATTCGACAGCGA TCCTT CTT AAGGA TTTTGACTCAACACA BQ11320 1338387 - 1339184 + | signal peptide protein TERM 1214 1339489 - 1339507 + F 76 -2.5 -5.52384 | gap 1 AAGGAATAAGTATAG CTTCTGTG TCAT CA-AGAAG TTTTTTTCATGAAAC TERM 1215 1340082 - 1340093 + F 81 -5.8 -5.02074 | TTTCCATCGGTCGTT GTGG ATCA CCAC TTTTTTGGCAAATGA BQ11340 1340170 - 1340856 + | hypothetical protein BQ11350 1340875 - 1341696 + | hypothetical protein TERM 1216 1342241 - 1342257 + F 81 -10.9 -2.62983 | opp_overlap 1342253 TTGAACTCTCGACCT CTCCCTT ACC AAGGGAG TGCTCTGCCACTGAG BQ11380 1342368 - 1342598 + | hypothetical protein TERM 1217 1342725 - 1342711 - f 71 -6.4 -4.24183 | overlap 1342712 CATAATAAAGAATAA CTTCCC AAG GGGAAA AAACCTTTGGAAGGG TERM 1218 1342739 - 1342729 - f 79 -5.4 -5.09426 | CCCAAGGGGAAAAAA CCTT TGG AAGG GGACATGCAAAGGAA TERM 1219 1344043 - 1344024 - g 72 -3.5 -5.06816 | opp_overlap 1344025 1344027, overlap 1344025 AGGTTGGAAGAAAAA TTAGCCC GGTGTG GGGCTAT CATTCAACGCATAAC murA 1342770 - 1344065 + | UDP-N-acetylglucosamine 1-carboxyvinyltransferase TERM 1220 1344100 - 1344112 + T 85 -9.1 -4.08557 | overlap 1344093 1344107 GCCTTCATTCCTTTC GGGGA TTG TCCCC TTCTTCTTTGGGGAC TERM 1221 1344127 - 1344140 + T 75 -8.1 -3.78193 | overlap 1344125 CTTCTTCTTTGGGGA CTCCC TTGG GGGAG TATTTCTCTTTAATA BQ11400 1344837 - 1344169 - | phage related protein TERM 1222 1345266 - 1345290 + r 100 -17.3 -3.53012 | opp_overlap 1345261 1345287 AACCAGGCAAGTTCC GCTCTTCTGCT CGA AGCAGAAGAGC TTTCAGCCCGAAGAA BQ11410 1345700 - 1345458 - | hypothetical protein TERM 1223 1345831 - 1345855 + r 100 -17.3 -3.53012 | opp_overlap 1345826 1345852 AACCAGGCAAGTTCC GCTCTTCTGCT CGA AGCAGAAGAGC TTTCAGCCCGAAGAA BQ11420 1346216 - 1346037 - | hypothetical protein TERM 1224 1346407 - 1346431 + r 100 -17.3 -3.53012 | opp_overlap 1346402 1346428 AACCAGGCAAGTTCC GCTCTTCTGCT CGA AGCAGAAGAGC TTTCAGCCCGAAGAA BQ11430 1346810 - 1346613 - | hypothetical protein BQ11450 1347206 - 1346817 - | hypothetical protein BQ11460 1347838 - 1347527 - | hypothetical protein TERM 1225 1348774 - 1348753 - g 90 -7.3 -5.34655 | opp_overlap 1348758, overlap 1348754 GAAGGAAAAAGAAAA GGAAACACC TCAC GGTGTTTCA GAAAAGCCCTTTTTT TERM 1226 1348773 - 1348754 - g 83 -10.8 -3.78353 | opp_overlap 1348758, overlap 1348753 AAGGAAAAAGAAAAG GAAACACC TCAC GGTGTTTC AGAAAAGCCCTTTTT BQ11480 1348292 - 1349290 + | hypothetical protein TERM 1227 1349347 - 1349321 - g 71 -7.3 -3.93578 | overlap 1349346 TGAAATCAAACAGAA GCTTTCGTCTC AAGCG GAGGCAAAAGC AAAGCCAACAGCCTC BQ11490 1349292 - 1349990 + | hypothetical protein BQ11500 1350231 - 1352591 + | phage related protein BQ11510 1352717 - 1353313 + | hypothetical protein BQ11520 1353910 - 1354395 + | hypothetical protein BQ11530 1355553 - 1355870 + | hypothetical protein TERM 1228 1355952 - 1355970 + F 86 -5.3 -5.67283 | gap 1, opp_overlap 1355952 GCTGAATATTGAAAA GCCCC-TA GAAA TATGGGGC TTTTTTATTTCGCTT TERM 1229 1357280 - 1357292 + F 71 -7.7 -3.55444 | overlap 1357284 TGATGTTGTTTTTTG CAGGT GTC ACCTG TTTAAAAGATGACAA BQ11560 1357813 - 1358361 + | hypothetical protein TERM 1230 1358415 - 1358397 - f 75 -9 -3.50929 | opp_overlap 1358397 GAAAGGACACGATAA TGTGTAAA ACA TTTACACA TTGTGCGCTGGATTC TERM 1231 1358397 - 1358415 + F 75 -9 -3.33969 | opp_overlap 1358397 GAAAGGACACGATAA TGTGTAAA ACA TTTACACA TTGTGCGCTGGATTC TERM 1232 1360011 - 1360001 - f 71 -5.4 -4.49981 | CAGAGCAGCATAAAA GCTT GAG AAGC AAAAAGAGCATACAG TERM 1233 1360404 - 1360383 - f 70 -3.7 -4.88786 | gap 1 AGCAAAAGAAATAAA CCGCAGTGCA ACT TACAC-GCAG TTTGCAAAGAGCAAA TERM 1234 1360555 - 1360543 - f 71 -5.5 -4.56597 | TCTCCCGTGCAAAAA GAGAG AGG CCCTC AAGTGCGAAGAGCAG TERM 1235 1360829 - 1360817 - f 78 -6.9 -4.36914 | opp_overlap 1360808 1360820, overlap 1360818 TCGTTTGCGAGAAAA CGCGC TTT GCGCA AAAAGCTCTTCACGC TERM 1236 1360828 - 1360818 - f 70 -8.2 -3.21934 | opp_overlap 1360808 1360820, overlap 1360817 CGTTTGCGAGAAAAC GCGC TTT GCGC AAAAAGCTCTTCACG yopP 1361316 - 1362263 + | intracellular effector TERM 1237 1362277 - 1362287 + F 76 -2.6 -5.48303 | opp_overlap 1362277 AAATCTTTGCTTAAA TTAT GAT ATAA TTTTTTTAACATTGT TERM 1238 1363710 - 1363728 + F 93 -8.1 -5.60993 | AAAGTCGGTCATTCA GCTCTGC TTTGT GCAGGGC TTTTTTTATGGAGAA TERM 1239 1364264 - 1364280 + G 77 -5.1 -4.94992 | overlap 1364267 AAAGCAGAAGCCCTT GCACCAA TTA TTGGTTC TTTTTCTGGGTTTGG TERM 1240 1364267 - 1364277 + G 73 -5.4 -4.55383 | overlap 1364264 GCAGAAGCCCTTGCA CCAA TTA TTGG TTCTTTTTCTGGGTT BQ11590 1363748 - 1364410 + | phage related lysozyme TERM 1241 1366075 - 1366088 + F 79 -4.5 -5.22039 | TTTAACTGCTCAATT GTGCT GGAT GGCAC TTTTTTCAGTTTCCG TERM 1242 1368688 - 1368698 + G 76 -4.6 -5.1523 | overlap 1368685 ACTTGTATTTTTGCA CGGG GGG CTCG TTTTTATCTTCTCGC BQ11640 1368247 - 1368855 + | hypothetical protein BQ11650 1368868 - 1369440 + | hypothetical protein TERM 1243 1371521 - 1371511 - g 70 -3.2 -4.92828 | AAACCCAAAAACAAA CGCT TTT AACG TGGATTCAGCCTGGT TERM 1244 1371935 - 1371945 + G 72 -3.2 -5.07486 | TGGAGCTTTGGTTTT TGCC ACA GGTA TTTTTATTGGCAATA BQ11660 1371141 - 1371965 + | hypothetical protein TERM 1245 1372142 - 1372154 + F 77 -4.8 -5.14645 | opp_overlap 1372136 AAAAAAAGCGCGAGT CCTC ACCCA GAGG TTTTTATTAGCTTGT dut 1372224 - 1372781 + | deoxyuridine 5 27-triphosphate nucleotidohydrolase TERM 1246 1373390 - 1373374 - T 75 -8.7 -3.5044 | opp_overlap 1373374 1373372, overlap 1373366 1373372 AATACAATGGAAATA GCTCTCC ACT AGAGAGC TCTTGATCACGCCGT exbD 1374214 - 1373732 - | biopolymer transport exbD protein exbB 1375053 - 1374211 - | biopolymer transport exbB protein TERM 1247 1375218 - 1375205 - H 84 -5.3 -5.43553 | opp_overlap 1375203 1375205 ATCTAAAAAATAAAA CTTGA TAAA TCAAG TATAGTTTTATTTCA BQ11720 1375539 - 1375865 + | hypothetical protein TERM 1248 1376053 - 1376066 + G 88 -8.1 -5.01042 | TGACACCTCTTGTAG CAGCG AGCA CGCTG TTTTTCATTTGGCTT BQ11730 1375869 - 1376306 + | hypothetical protein TERM 1249 1376342 - 1376370 + T 100 -20.5 -5.10767 | GATCCTATCCACCTA CGACGCTTTCTCT TCA AGAGAAAGCGTCG TTTTTGTCTTCCATG mrsA 1378025 - 1376646 - | phosphoglucomutase /phosphomannomutasefamily protein mrsA ftsH 1380642 - 1378489 - | cell division protein ftsH TERM 1250 1378540 - 1378552 + g 74 -4.8 -4.82998 | opp_overlap 1378540 TTCGGCAGTATTTAA CGCT TTTTC AGCG TTTGTTTTACTTTCA TERM 1251 1380096 - 1380069 - G 73 -5.5 -4.5774 | gap 1 GACCAACAAGCAAAA CGCCC-CGTGGG ATACG CCCACCTAGGCG TTGAAATTTTTGTGG BQ11760 1382185 - 1380755 - | hypothetical protein TERM 1252 1383246 - 1383236 - R 71 -3.2 -5.03747 | AAACCGGTGAAAAAA GACA GCT TGCC AATTTTGTTCCTTAC pal 1383849 - 1383331 - | peptidoglycan-associated lipoprotein BQ11780 1384750 - 1384061 - | hypothetical protein TERM 1253 1384206 - 1384229 + g 84 -6.8 -5.00616 | gap 1, opp_overlap 1384203 GGGAGTAAAGATCTG TCACCCTCGTT AGA GAC-AGGGTGA TTTTTTGCAGCACGC BQ11790 1385145 - 1385891 + | hypothetical protein TERM 1254 1386033 - 1386052 + T 100 -9.2 -5.16206 | opp_overlap 1386033 CTCCATTCATCAAAA GCCCCGCT TCAA AGCGAGGC TTTTTCTATTACTTT TERM 1255 1386052 - 1386033 - T 100 -11.4 -4.2828 | opp_overlap 1386033 CTCCATTCATCAAAA GCCCCGCT TCAA AGCGAGGC TTTTTCTATTACTTT TERM 1256 1388141 - 1388129 - T 73 -4.1 -5.00884 | ACGGGGTTCAAAAAA TCTCC ATT GGAAA GTGTTGCAAAATGCA tolB 1390796 - 1389474 - | translocation protein TolB TERM 1257 1390791 - 1390776 - G 88 -2.6 -5.9003 | gap 1, opp_overlap 1390788 1390790 AAACCAAGAAAAAAA TATG-CG TCT CGTCATA ACCATTATGGATATG tolA 1392019 - 1390841 - | tolA protein TERM 1258 1391164 - 1391174 + g 74 -4 -5.14563 | GTGCCATTTTTGTGA TATC GTT GATA TTTTTTCGTCCCCCC TERM 1259 1391698 - 1391710 + g 76 -3.3 -5.29846 | opp_overlap 1391690 GTGAAGACATTGTCT CAACG CGT CGTGG TTTTTCTTTCGGCTT tolR 1392549 - 1392097 - | tolR protein tolQ 1393275 - 1392562 - | inner membrane tolQ protein TERM 1260 1392967 - 1392981 + g 79 -5 -5.0538 | TATTGATGTATGGAT TCCTTT TTC AAGGGA TTTTTTCCACTCCAC BQ11860 1393859 - 1393419 - | hypothetical protein TERM 1261 1393737 - 1393716 - G 82 -8.1 -4.58395 | TGTATCCCGTAAAAA TTCTGAACG TCCC CGTTCAAAA AATTCCAAATAGCGC ruvB 1394937 - 1393852 - | Holliday junction DNA helicase B TERM 1262 1394366 - 1394352 - G 70 -2.7 -5.08824 | overlap 1394353 1394354 TCTGTACCGAAAAAA GGCGC GCATT GCGCT GAACAATATATTCCA ruvA 1395577 - 1394960 - | Holliday junction DNA helicase motor protein TERM 1263 1395157 - 1395189 + g 71 -6.3 -4.28774 | opp_overlap 1395160, overlap 1395162 GCTGTGGAGTGAAAT GGAGTGCATTGTCAT TAA ATGGCAATGCTTTGC TTTTAAGTTCGCTCA TERM 1264 1395162 - 1395184 + g 93 -11.4 -4.23528 | opp_overlap 1395160, overlap 1395157 GGAGTGAAATGGAGT GCATTGTCAT TAA ATGGCAATGC TTTGCTTTTAAGTTC ruvC 1396083 - 1395574 - | Holliday junction resolvase BQ11900 1397014 - 1396496 - | hypothetical protein TERM 1265 1397213 - 1397195 - R 70 -8.2 -3.24406 | CATTACAAACAGAGA GGTTTCCT TGA AGAAAACC AATGAAGAGATCGGC opgC 1398324 - 1397182 - | opgC protein TERM 1266 1397369 - 1397349 - G 80 -6.1 -4.6856 | CAAACATGGCAAAAA CAGTCCCCG TTA CAAAGACTG GTAAACTATGTTTGC thiE2 1398441 - 1399103 + | thiamine-phosphate pyrophosphorylase BQ11930 1400242 - 1401285 + | hypothetical protein efp 1401536 - 1402108 + | elongation factor P TERM 1267 1402307 - 1402317 + G 75 -5.4 -4.77165 | TTGAGTAAAGCACGA CCAA AAT TTGG TTTTCTTATGGAAGA suhB 1402124 - 1402915 + | extragenic suppressor protein suhb TERM 1268 1402908 - 1402896 - T 87 -6.3 -5.42265 | opp_overlap 1402895 CCAAATTAGAAAAAA CCTTT AAA AAAGG CATTTGAACCACAAA BQ11960 1404809 - 1403019 - | ABC transporter, ATP-binding protein rpmE 1404996 - 1405217 + | 50S ribosomal protein L31 TERM 1269 1405420 - 1405382 - T 73 -4.6 -5.02201 | opp_overlap 1405390, overlap 1405385 1405387 1405389 AAAAGAGTATAAAAA TGAGATATCCTGCCTTAA GCC TTAAGGCAGGTTTTTTTA TGTGTCAAATGAAAA TERM 1270 1405415 - 1405387 - T 73 -8.9 -3.2268 | opp_overlap 1405390, overlap 1405385 1405382 1405389 AGTATAAAAATGAGA TATCCTGCCTTAA GCC TTAAGGCAGGTTT TTTTATGTGTCAAAT TERM 1271 1405413 - 1405389 - T 87 -11.5 -3.16187 | opp_overlap 1405390, overlap 1405387 1405385 1405382 TATAAAAATGAGATA TCCTGCCTTAA GCC TTAAGGCAGGT TTTTTTATGTGTCAA TERM 1272 1405390 - 1405412 + T 100 -15 -5.76633 | opp_overlap 1405389 1405387 1405385 1405382 ATAAAAATGAGATAT CCTGCCTTAA GCC TTAAGGCAGG TTTTTTTATGTGTCA fbaB 1406542 - 1405511 - | fructose-bisphosphate aldolase pgk 1407814 - 1406621 - | phosphoglycerate kinase TERM 1273 1408168 - 1408155 - R 90 -8.1 -5.0538 | opp_overlap 1408153 1408151 1408155 TTCTATTGCAAAAAA GGACC TTCA GGTCC TCTCTTCGTCCACTG gap 1409183 - 1408161 - | glyceraldehyde-3-phosphate dehydrogenase TERM 1274 1408820 - 1408798 - G 100 -15 -3.73414 | TAGACCACAGTGAAA TCTGCACCTT CTG AAGGTGCAGA AACAAGAACACGTTT tktA 1411358 - 1409352 - | transketolase BQ12030 1411685 - 1411960 + | hypothetical protein BQ12040 1411973 - 1412350 + | hypothetical protein TERM 1275 1412506 - 1412494 - T 86 -4.8 -5.75538 | TCTAAAAAAGAAAAA GCAC TGCTC GTGC CTCACTTAAACTGCC TERM 1276 1413228 - 1413246 + T 74 -2.3 -5.58209 | opp_overlap 1413228 AGATCCACTAAAATA CCGATTG GTCGA CGAACGG TTTTTTTGACTTTCC BQ12060 1413950 - 1413417 - | hypothetical protein BQ12070 1414197 - 1414454 + | hypothetical protein BQ12080 1416292 - 1414451 - | ABC transporter, ATP-binding protein TERM 1277 1414517 - 1414532 + g 81 -2.6 -5.62288 | TAACCATTCATCTTC TTTTTG CGCA CAAGAA TTTTTCTTTTCTTCC TERM 1278 1415318 - 1415328 + g 75 -5.4 -4.80882 | opp_overlap 1415318 1415316 GCCAATCAGAACAGA CAAC AAT GTTG TTTTTCCTATACCAT TERM 1279 1416197 - 1416240 + g 87 -8.3 -4.57073 | gap 1, opp_overlap 1416223, overlap 1416198 CACCAGAGCGATACG GGCACCTTGCTCAACCGA TAAACAAGC TTGGTTGAGCAAGG-GCG TTTTTCCAAAGGCTA TERM 1280 1416198 - 1416239 + g 86 -11.8 -3.33922 | gap 1, opp_overlap 1416223, overlap 1416197 ACCAGAGCGATACGG GCACCTTGCTCAACCGA TAAACAAGC TTGGTTGAGCAAGG-GC GTTTTTCCAAAGGCT BQ12090 1416690 - 1416292 - | hypothetical protein BQ12100 1417429 - 1416794 - | hypothetical protein TERM 1281 1417022 - 1417008 - G 77 -5 -4.85177 | AAATCACACGAAAAA GGCTTT GGC AAAACC GGCCACCCTTCTTCA TERM 1282 1418186 - 1418168 - g 79 -3.2 -5.41143 | CATGCCGGAAAAAAA CTTCAA AAAACCA TTGAAG ACAAACAACAACTCG BQ12110 1417661 - 1419106 + | hypothetical protein TERM 1283 1419572 - 1419545 - T 100 -10.7 -4.59853 | opp_overlap 1419549, overlap 1419549 TTAATGGGTTAAAAA TAAACCACCGG TCACTG CCGATGGTTTA AATAAAAGAGAAAAC TERM 1284 1419568 - 1419549 - T 88 -7.1 -4.85782 | opp_overlap 1419549, overlap 1419545 TGGGTTAAAAATAAA CCACCGG TCACTG CCGATGG TTTAAATAAAAGAGA rpoH2 1420833 - 1419922 - | RNA polymerase factor sigma-32 TERM 1285 1419983 - 1420009 + g 70 -8.6 -3.38314 | opp_overlap 1419972 1419968 1419983, overlap 1419981 CGCAGCTTTTGCAAA GCCCGTGCTTCA ATT TGGCGCACGCGC TCTTTCGAGATTCCC TERM 1286 1420956 - 1420974 + H 77 -3.2 -5.58179 | GTATTTTTATAATCG CAATTG TTTTTTT CAATTG TTTTTTATTGTCATC TERM 1287 1421148 - 1421116 - H 91 -5.7 -5.89659 | opp_overlap 1421118, overlap 1421118 ATAAAAAAATAAAAA GATCACACAAAACAG CAT CTGTTTTATTTGATT TTCGGCTTATTTGTC TERM 1288 1421146 - 1421118 - H 84 -8.3 -4.51984 | opp_overlap 1421118, overlap 1421116 AAAAAAATAAAAAGA TCACACAAAACAG CAT CTGTTTTATTTGA TTTTCGGCTTATTTG TERM 1289 1421573 - 1421583 + G 74 -4.6 -4.98255 | opp_overlap 1421574, overlap 1421569 CTCGCTTTTTCCAAA CGCG CAA TGCG TTTTTGTGCTTCAGC BQ12130 1421306 - 1422976 + | hypothetical protein fdxA 1422997 - 1423335 + | ferredoxin II TERM 1290 1423586 - 1423600 + F 71 -6.4 -4.15854 | AGAACACTCAAAGTT CAGGCT TTT AGTCTG TTTTCCGGTACATTT TERM 1291 1423736 - 1423700 - g 72 -9.5 -3.04322 | opp_overlap 1423705, overlap 1423702 TGCAACCTCTGAATA TATCGTCTACCCTACCC ATG GAGTAGGGCAGATTATA GCGATTGAAGATCAA TERM 1292 1423705 - 1423731 + G 75 -9.4 -3.33261 | opp_overlap 1423702 1423700 CCTCTGAATATATCG TCTACCCTACCC ATG GAGTAGGGCAGA TTATAGCGATTGAAG BQ12150 1423644 - 1424228 + | transcriptional factor regulator TERM 1293 1424286 - 1424252 - T 100 -16.1 -3.6796 | opp_overlap 1424252 1424257 1424262, overlap 1424257 1424262 AAGACATTTTAATAA TAAAATAAAACCAGC GCTCT GCTGGTTTTATTTTA TTATTAACGACCTTC TERM 1294 1424252 - 1424286 + T 100 -16.8 -3.62522 | opp_overlap 1424252 1424257 1424262, overlap 1424257 1424262 AAGACATTTTAATAA TAAAATAAAACCAGCG CTC TGCTGGTTTTATTTTA TTATTAACGACCTTC TERM 1295 1424257 - 1424281 + T 100 -12.3 -4.89477 | opp_overlap 1424252 1424257 1424262, overlap 1424252 1424262 ATTTTAATAATAAAA TAAAACCAGCG CTC TGCTGGTTTTA TTTTATTATTAACGA TERM 1296 1424281 - 1424257 - T 100 -11.6 -4.90079 | opp_overlap 1424257 1424252 1424262, overlap 1424252 1424262 ATTTTAATAATAAAA TAAAACCAGC GCTCT GCTGGTTTTA TTTTATTATTAACGA TERM 1297 1424262 - 1424276 + T 89 -7.8 -5.33124 | opp_overlap 1424257 1424252 1424262, overlap 1424257 1424252 AATAATAAAATAAAA CCAGCG CTC TGCTGG TTTTATTTTATTATT TERM 1298 1424276 - 1424262 - T 89 -7.1 -5.33124 | opp_overlap 1424262 1424257 1424252, overlap 1424257 1424252 AATAATAAAATAAAA CCAGC GCTCT GCTGG TTTTATTTTATTATT rpmF 1424955 - 1424776 - | 50S ribosomal protein L32 TERM 1299 1424917 - 1424933 + g 74 -4.3 -5.00138 | CGAACGGCGCATACC CCGCTTC GAT GGAGAGG TTTTTCGTTTAGGTA TERM 1300 1425011 - 1424990 - H 80 -5.1 -5.30339 | opp_overlap 1424990 ATTAAAACAGAAAAA GCAATGTCA AAAA CGACAATGC TTTTATTAAAAAATA ispA 1425388 - 1426293 + | geranyltranstransferase (farnesyl-diphosphate synthase) ispG 1427603 - 1426362 - | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase BQ12190 1427839 - 1428123 + | hypothetical protein TERM 1301 1428164 - 1428183 + T 100 -13.6 -5.01546 | AATCAAACTTTTCAA TGCCCGCT TTGA AGCGGGCA TTTTTCTCTGCCTTT BQ12200 1429575 - 1428571 - | transport protein transmembrane TERM 1302 1429264 - 1429276 + g 83 -6.3 -5.08824 | CTGCAACACAACGCT TGCAA GTT TTGCA TTTTTTGAATCCAAA BQ12210 1431233 - 1429572 - | transport protein transmembrane TERM 1303 1430226 - 1430204 - G 74 -6.2 -4.44525 | opp_overlap 1430220, overlap 1430198 1430206 AAAAAAAGACACAAA TCGCACCCCC TAA AAGGGTGCCA AATGTAATTGCAAAA atpC 1431672 - 1431256 - | ATP synthase epsilon chain atpD 1433356 - 1431746 - | F0F1 ATP synthase subunit beta TERM 1304 1433392 - 1433381 - R 70 -7.2 -3.75153 | CCTTTTCAATTTAAA GCGC TTCA GCGC CCGCAATAATTTCGA atpG 1434287 - 1433376 - | F0F1 ATP synthase subunit gamma atpA 1435843 - 1434308 - | F0F1 ATP synthase subunit alpha TERM 1305 1435745 - 1435723 - G 82 -8.4 -4.14725 | overlap 1435724 TATCCAAACCATAAA CGCGGGCGAT ACC ATCACCCACA GACAAAACCCAACCA TERM 1306 1435744 - 1435724 - G 72 -9.7 -3.08112 | overlap 1435723 ATCCAAACCATAAAC GCGGGCGAT ACC ATCACCCAC AGACAAAACCCAACC atpH 1436427 - 1435843 - | ATP synthase delta chain priA 1439419 - 1437197 - | primosome assembly protein PriA TERM 1307 1439068 - 1439035 - G 71 -9.5 -2.78891 | overlap 1439032 ACCGCAACCCAAGCA TCTGTGCCTCCGGCT CTAA AGCGGCCGGCACAGA CAAAACCAATCGTGC talC 1439880 - 1440533 + | putative translaldolase BQ12300 1441132 - 1440530 - | hypothetical protein leuS 1443761 - 1441119 - | leucyl-tRNA synthetase TERM 1308 1443519 - 1443499 - G 85 -8.3 -4.34402 | overlap 1443500 GCTGGCATACCAAAA GCATCCCAT CCC ATGGGATGA AGCACATCAAACCCC TERM 1309 1443518 - 1443500 - G 83 -11.8 -3.2032 | overlap 1443499 CTGGCATACCAAAAG CATCCCAT CCC ATGGGATG AAGCACATCAAACCC TERM 1310 1444244 - 1444233 - g 75 -5.8 -4.73635 | TACAATCGAATAAAA CAGC AGAA GCTG TCAAAATTTTTGATG TERM 1311 1444388 - 1444377 - g 81 -5.8 -5.11033 | overlap 1444379 TAGAACTCCAAAAAA GTGG TATT CCAC CGCAAGAAGTCATAC BQ12320 1443947 - 1444636 + | hypothetical protein TERM 1312 1445085 - 1445061 - f 100 -15.9 -2.78216 | opp_overlap 1445064, overlap 1445064 CAGCGGTATCAACCA TAAGGGAGCAT AAA ATGCTCCCTTA AATACAATTGCGTAA TERM 1313 1445082 - 1445064 - f 95 -13.2 -3.54029 | opp_overlap 1445064, overlap 1445061 CGGTATCAACCATAA GGGAGCAT AAA ATGCTCCC TTAAATACAATTGCG TERM 1314 1445064 - 1445082 + F 88 -13.2 -3.07994 | opp_overlap 1445064 1445061 CGGTATCAACCATAA GGGAGCAT AAA ATGCTCCC TTAAATACAATTGCG TERM 1315 1445664 - 1445650 - g 82 -4.2 -5.41143 | opp_overlap 1445649 1445650 CATGGCGTAAAAAAA GGTGAC AGA GTTACC ATTTACCTCCCGATG acs 1445263 - 1447221 + | acetyl-CoA synthetase TERM 1316 1447664 - 1447654 - f 76 -4 -5.27938 | ATGGTTAAAGAAAAA CATT GAG AATG GTAGAATATGAACCT ftsE 1447753 - 1448412 + | cell division protein ftsE BQ12350 1448405 - 1449358 + | hypothetical protein BQ12360 1449345 - 1450037 + | hypothetical protein TERM 1317 1451161 - 1451143 - T 70 -3.8 -5.00196 | opp_overlap 1451147, overlap 1451147 CTTTAAAGAAGAAAA GAAATCCT CGT AGGATCAC TTAATCCACTTCTGA TERM 1318 1451157 - 1451147 - T 77 -5.4 -4.98461 | opp_overlap 1451147, overlap 1451143 AAAGAAGAAAAGAAA TCCT CGT AGGA TCACTTAATCCACTT BQ12380 1453363 - 1451381 - | ABC transporter, ATP-binding protein TERM 1319 1452531 - 1452513 - G 74 -3.8 -5.03715 | opp_overlap 1452514, overlap 1452514 1452516 AGCATTGTTAAAAAA GTACGCAT CCG ATGCGCAT TCATTGCCAACAATG BQ12390 1454587 - 1453367 - | hypothetical protein TERM 1320 1454088 - 1454100 + g 70 -3.3 -4.96646 | overlap 1454088 TGAAGCTGAGCAATT TGCGC CTC GCGTG TTTTTAATTGTGTCG BQ12400 1456068 - 1454584 - | hypothetical protein xthA2 1456938 - 1456129 - | exodeoxyribonuclease III TERM 1321 1456735 - 1456715 - G 71 -6.1 -4.14472 | overlap 1456728 TCAACATTCTTAAAA GGCAAACGT GAA ACAATTGCC ACGCCATTGTAAGAT BQ12420 1457580 - 1456972 - | Outer membrane lipoprotein carrier protein TERM 1322 1457124 - 1457138 + g 70 -5.6 -4.36914 | AAACCATCTTTATTT GCCCTG ACC CAGTGC TTTTATCCCGCAGAA ftsK 1460141 - 1457703 - | cell division protein ftsK TERM 1323 1458744 - 1458763 + g 72 -4.3 -4.7497 | gap 1 CGATCCTGTTGTGCC TGCCACCA AAAGA TGG-GGCA TTTTTGCTAAATCCG TERM 1324 1458973 - 1458953 - G 74 -9 -3.55548 | opp_overlap 1458953, overlap 1458943 1458941 CAACACGTGCTGAAA TCGCACGC ATCGA GCGTGCAA TATCATCTGCCAGAC TERM 1325 1459487 - 1459509 + g 79 -5.7 -4.86033 | gap 1, opp_overlap 1459486 1459487 CCTCTCCTGACAAAT CGAAATC-TG GATC CACGATTTCG TTTTTCTGGACGTTT TERM 1326 1460404 - 1460386 - g 78 -3.8 -5.18158 | AATAAAAAAAAAGAA CAATGTGA TCT CCTCATTG CAGGTGGCGCGGCTG BQ12440 1460320 - 1461600 + | 2-octaprenyl-6-methoxyphenyl hydroxylase hvrA 1462572 - 1462303 - | trans-acting regulatory protein hvrA TERM 1327 1463301 - 1463314 + G 70 -2.5 -5.1523 | CATACAGAATTGACT TTTAT ATTG ATAAA TTTTTCTATTATCGG BQ12460 1462619 - 1463344 + | hypothetical protein trwN 1463341 - 1463961 + | trwN protein korA 1464105 - 1464383 + | korA protein trwL1 1464361 - 1464678 + | trwL1 protein trwL2 1464840 - 1465160 + | trwL2 protein trwL3 1465203 - 1465505 + | trwL3 protein trwL4 1465636 - 1465953 + | trwL4 protein trwL5 1466119 - 1466433 + | trwL5 protein trwL6 1466566 - 1466883 + | trwL6 protein trwL7 1467013 - 1467330 + | trwL7 protein TERM 1328 1467744 - 1467756 + G 84 -7.7 -4.66938 | overlap 1467743 ATTTAGTGTTATTAT TGCTG GAG CAGCA TTTTATATTAGCAGT trwL8 1467478 - 1467792 + | trwL8 protein trwM 1467809 - 1468117 + | trwM protein TERM 1329 1469537 - 1469548 + G 75 -5.8 -4.72986 | opp_overlap 1469537 1469536 CGCAAAAATTCAAAC CGAC AACT GTCG TTTTTGATAAAGATC TERM 1330 1470386 - 1470407 + G 73 -10.2 -2.89602 | overlap 1470384 1470385 GTGATCAGTCTGCGC TTGCCGAG CTTAAT CTCGGCAA ATTTAATGTCACAAC trwK 1468120 - 1470591 + | trwK protein TERM 1331 1470952 - 1470933 - g 77 -5 -4.92777 | opp_overlap 1470935, overlap 1470935 AATAGTAAGGAAAAA CATGCAGA TATA TCTGCATC ATTTGAGAAGATCCG TERM 1332 1470950 - 1470935 - g 73 -7.6 -4.07008 | opp_overlap 1470935, overlap 1470933 TAGTAAGGAAAAACA TGCAGA TATA TCTGCA TCATTTGAGAAGATC TERM 1333 1471094 - 1471112 + G 76 -9 -3.61715 | opp_overlap 1471084 GCAAACAGAGAATCG CTCTAAAA AAA TTTTAGAG TTGTTAAACGAAATC trwJ1 1470588 - 1471340 + | trwJ1 protein trwI1 1471585 - 1472469 + | trwI1 protein trwH1 1472635 - 1472778 + | hypothetical protein TERM 1334 1473209 - 1473197 - g 70 -3.4 -4.90266 | TCGAGGAAGCAAAAA GACT GCATG AGTC TATAACAAACAATCA TERM 1335 1473494 - 1473477 - g 85 -2.7 -5.80003 | opp_overlap 1473454 TGAAGAAACAAAAAA TCGTTTT AGCC AAATCGA AAAAATGTTAAAAGA trwJ2 1472944 - 1473735 + | trwJ2 protein trwI2 1473980 - 1474864 + | trwI2 protein trwH2 1475030 - 1475173 + | hypothetical protein trwG 1475170 - 1475868 + | trwG protein trwF 1475882 - 1476682 + | trwF protein trwE 1476682 - 1477854 + | trwE protein TERM 1336 1477870 - 1477902 + GT 78 -7.7 -4.20367 | opp_overlap 1477868 1477864 1477870 CCCAGTACAGAAAGA TCAAGCAGTTGCGCA ACT TCTGCAGCCGCTTGA TTCTTTCTTAAAAGA trwD 1477829 - 1478890 + | trwD protein TERM 1337 1478932 - 1478952 + T 100 -12.7 -4.57581 | opp_overlap 1478932 AAATTTCAACAAAAA GCCGTAATA AAT TATTACGGC TTTCTTATTTAACCT TERM 1338 1478952 - 1478932 - T 100 -12.7 -5.11112 | opp_overlap 1478932 AAATTTCAACAAAAA GCCGTAATA AAT TATTACGGC TTTCTTATTTAACCT sdhB 1481921 - 1481142 - | succinate dehydrogenase iron-sulfur subunit TERM 1339 1481956 - 1481966 + r 73 -8.2 -3.6682 | AAACACGTTTTTTAG GCGC AAT GCGC TTTAAATCGATCCCA sdhA 1483777 - 1481936 - | succinate dehydrogenase flavoprotein subunit sdhD 1484169 - 1483783 - | succinate dehydrogenase hydrophobic membrane anchor protein sdhC 1484589 - 1484188 - | succinate dehydrogenase cytochrome b560 subunit TERM 1340 1485052 - 1485037 - R 88 -6.1 -5.74122 | opp_overlap 1485037 GACCACACAAAAAAA GCGAC ATAAAA GTCGC TTTGTCATAAACTCT rplS 1485522 - 1485082 - | 50S ribosomal protein L19 TERM 1341 1485529 - 1485539 + r 84 -5.4 -5.4505 | AATATTCATTTCTTT CATC CTT GATG TTTTTTATTGACCAG TERM 1342 1485700 - 1485685 - R 81 -7.6 -4.34402 | TCCTTCACAGGAAAA CTCTCT AAAA AGAGAG CCATACAAATACACC trmD 1486429 - 1485731 - | tRNA (guanine-n1)-methyltransferase TERM 1343 1485889 - 1485867 - G 89 -12 -3.65991 | opp_overlap 1485865 1485862 ACTGGCGGAATACAA CGCCCTTCAA AAA TAGAAGGGCG CGTATATTGAGGGTG rimM 1487019 - 1486426 - | 16s rRNA processing protein rimM TERM 1344 1487406 - 1487396 - g 70 -5.4 -4.3534 | overlap 1487390 TTCTAACGACGAAAA CGAT TAC ATCG TCTCCGATAAAAGTT BQ12760 1487151 - 1487972 + | sapC-related protein TERM 1345 1487966 - 1487954 - f 73 -4.1 -4.92239 | CGAAAAACCTAAAAA GAAAG AGA CCTTC AACTAGAAATGCCCC TERM 1346 1488129 - 1488141 + G 71 -4.1 -4.99043 | ATGAACGTGATACAC GACAG TTT TTGTC TTTTCTTTGTCAACA xerC 1487975 - 1488943 + | site-specific tyrosine recombinase XerC bolA 1489246 - 1488968 - | transcriptional regulator bolA BQ12790 1489368 - 1489982 + | DnaJ related protein TERM 1347 1490806 - 1490792 - g 79 -10 -3.59315 | opp_overlap 1490792, overlap 1490781 TCAATCAGGCTCAAA TGGACC GCT GGTCCA TTGTGACGATCTTAA TERM 1348 1490792 - 1490806 + G 77 -10 -3.33315 | opp_overlap 1490792 1490781 TCAATCAGGCTCAAA TGGACC GCT GGTCCA TTGTGACGATCTTAA cobS 1490170 - 1491141 + | cobalamin biosynthesis protein cobS TERM 1349 1492677 - 1492696 + G 73 -7.8 -3.87551 | AGCGCCGATACACCG TGGCGTCG AGCA CGACGCAA TTTAGGTTTGATGAT TERM 1350 1492760 - 1492773 + G 90 -9.5 -4.3739 | TGAAGCACTTATTTG GGCGC ATCA GCGCC TTTTATCACGGCGTG cobT 1491171 - 1493075 + | cobalamin biosynthesis protein cobT TERM 1351 1493315 - 1493304 - T 75 -7.2 -4.20516 | opp_overlap 1493303, overlap 1493305 CTCGTAGTCAACAAA GGCG ATTA CGCC GCTTGTTCAGCTTTT rpmB 1493602 - 1493309 - | 50S ribosomal protein L28 TERM 1352 1494541 - 1494531 - g 91 -2.4 -6.07627 | opp_overlap 1494540, overlap 1494533 ATGCTGAAAAAAAAA CAGC CCC GCGG GAAGAACTCCCCATT TERM 1353 1494629 - 1494643 + G 79 -9.2 -3.79295 | overlap 1494627 TTTATCTTGGCTGCT GGCGTC CTC GGCGCC TCTCTTTTTTTGCTA surF1 1493888 - 1494673 + | SurF1 family protein (Surfeit 1) TERM 1354 1495212 - 1495224 + T 70 -4.1 -4.7064 | ATCATGCTGTTGTAA GCTTG GGT TAAGC TTTATGTTTTTTATT purH 1497838 - 1496222 - | bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase TERM 1355 1496393 - 1496381 - G 82 -4.1 -5.46698 | overlap 1496382 TGCAAAAGGAAAAAA CGCAT CTG ATGCA ACCACGGACCCTCGA TERM 1356 1497081 - 1497106 + g 70 -3.3 -4.99435 | opp_overlap 1497082, overlap 1497075 1497082 GCTTTGCCTTGTAAA AGTTTTGCTGT TGCA ACACCAAAACG TTTTTCATTATTGCG TERM 1357 1497105 - 1497082 - G 71 -6.8 -4.07568 | opp_overlap 1497081 1497075 1497082 CTTTGCCTTGTAAAA GTTTTGCTGT TGCA ACACCAAAAC GTTTTTCATTATTGC BQ12880 1499704 - 1497995 - | hypothetical protein TERM 1358 1499476 - 1499463 - G 82 -3.8 -5.41941 | GAAACTAAAGAAAAA GGTG AAACAG CACC AGAATGAACAATATG sun2 1501113 - 1499770 - | SUN protein (Fmu protein) TERM 1359 1500254 - 1500242 - G 80 -6.3 -4.75174 | opp_overlap 1500242 1500240 TAGCGAACTGAAAAA TGAAG CCG CTTCA TATTTTCCTTCAAGC BQ12900 1502222 - 1501173 - | heat shock protein HtpX TERM 1360 1501446 - 1501436 - G 89 -6.8 -5.252 | GATGGGTAGAAAAAA GGCT ATC AGCC CCTTCACCCTTCAAA TERM 1361 1501890 - 1501905 + g 85 -9 -4.1466 | TAACAACCCAGTACT TGCAGC AACA GCTGCA TTTTGAGGATTGCGT TERM 1362 1502444 - 1502429 - g 81 -2.6 -5.66989 | TAAACATGAAAAAAA TAAAGA TAAA CCTTTA GAAAATGGTGGACGT BQ12910 1502262 - 1502522 + | hypothetical protein TERM 1363 1502566 - 1502600 + T 85 -8.7 -4.18443 | opp_overlap 1502569, overlap 1502568 1502569 1502571 AAAAACCCTTTTAAA GAAGATCCGTTTTTG TTCGT CAAAAACGGATCATA TTGTTCTTCTTTCTA TERM 1364 1502568 - 1502598 + T 90 -11.3 -3.66055 | opp_overlap 1502569, overlap 1502566 1502569 1502571 AAACCCTTTTAAAGA AGATCCGTTTTTG TTCGT CAAAAACGGATCA TATTGTTCTTCTTTC TERM 1365 1502597 - 1502569 - T 100 -14.8 -3.91488 | opp_overlap 1502569 1502568 1502566 1502571 AACCCTTTTAAAGAA GATCCGTTTTTG TTCGT CAAAAACGGATC ATATTGTTCTTCTTT TERM 1366 1502569 - 1502597 + T 95 -14.8 -2.78006 | opp_overlap 1502569, overlap 1502568 1502566 1502571 AACCCTTTTAAAGAA GATCCGTTTTTG TTCGT CAAAAACGGATC ATATTGTTCTTCTTT TERM 1367 1502571 - 1502595 + T 83 -11.6 -2.91032 | opp_overlap 1502569, overlap 1502569 1502568 1502566 CCCTTTTAAAGAAGA TCCGTTTTTG TTCGT CAAAAACGGA TCATATTGTTCTTCT rpsP 1503021 - 1502668 - | 30S ribosomal protein S16 TERM 1368 1502716 - 1502727 + g 72 -3.6 -5.03145 | overlap 1502707 CTTTGCTGCAGATAT GCGT TCTT GCGC TTTTTTACCAGGTTG TERM 1369 1502940 - 1502926 - G 73 -7 -4.17958 | AACACGTTCAAGAAA CCGCCC ATC GCGCGG ACTACGAGCATCCGC tyrA 1503373 - 1503038 - | chorismate mutase ffh 1504967 - 1503348 - | Signal recognition particle protein TERM 1370 1505198 - 1505185 - H 74 -3.1 -5.30155 | overlap 1505189 TTAGGAAGCAAAAAA GCAAC AAGC GTTAC GCCTAAAATTCCCGA TERM 1371 1506611 - 1506586 - g 70 -5.5 -4.42806 | CTATGCTTAAAGAAA TTGAGAAGCAT ATCC ATGCCTATCAA ACAAACCTCCCACCG TERM 1372 1506672 - 1506651 - g 80 -4.5 -5.2166 | gap 1, opp_overlap 1506655 CAAGAAGGCAAAAAA GCC-ATTGAA TTT CTCAATTGGC TGATGGACAATAATT TERM 1373 1507295 - 1507318 + G 81 -6.8 -4.6971 | opp_overlap 1507291 1507295 CCAATACAGCAGCAA TATTCGCGAA AAAA TTGGCGAATA TTTTGTTGAGCTTTA TERM 1374 1509066 - 1509050 - g 79 -9.5 -3.71873 | CGACCCAGATCCAAA CATAGCT GAA AGCTATG CAGAACGTATGCGCC TERM 1375 1510547 - 1510528 - g 70 -8.6 -3.32536 | gap 1, overlap 1510529 AAATCATTCGTATAA GC-CGCTTC AAT GAAGCGAGC CAAACAATTCCTGTG BQ12960 1506114 - 1510802 + | hypothetical protein BQ12970 1511878 - 1510820 - | hypothetical protein TERM 1376 1511725 - 1511715 - G 93 -6.8 -5.47159 | GTTAATAAAGAAAAA CCGT GCA ACGG CCAAGAAAACTGAAA BQ12980 1512787 - 1512041 - | glutamine amidotransferase BQ12990 1514438 - 1512882 - | hypothetical protein BQ13000 1515615 - 1514446 - | hypothetical protein TERM 1377 1514727 - 1514717 - G 93 -6.8 -5.40474 | ATCCGTTCAAAAAAA CCAG CAT CTGG CGCAACAACCTTTTG TERM 1378 1515036 - 1515058 + g 71 -6.2 -4.16146 | overlap 1515037 CAAGACTGTTTGCGT TGCTCTGTCC AGC GGACAAAGCC TTTTCCACATCTTTT TERM 1379 1515037 - 1515057 + g 72 -9.7 -3.08603 | overlap 1515036 AAGACTGTTTGCGTT GCTCTGTCC AGC GGACAAAGC CTTTTCCACATCTTT TERM 1380 1515693 - 1515662 - H 83 -6 -5.12916 | opp_overlap 1515684, overlap 1515684 1515685 GATAAAATAACAAAA TGAAAAAAGCTTTA AAAA TTAAGCGTTTTTCA AACAGCATAATTTAT BQ13010 1515996 - 1517090 + | O-sialoglycoprotein endopeptidase TERM 1381 1518377 - 1518366 - f 71 -3 -5.07652 | GCTTTTAAAATAAAA TGAA TGCT TTCA ACAAAAAAACGGGTA BQ13020 1518644 - 1519072 + | hypothetical protein BQ13040 1520256 - 1520939 + | two-component response regulator TERM 1382 1521034 - 1521024 - T 74 -3.2 -5.22258 | opp_overlap 1521031, overlap 1521031 1521032 GAAAGCAAAATAAAA CTCA AGA CGAG AGAGAACTCTCACAC BQ13050 1521789 - 1521025 - | hypothetical protein TERM 1383 1521099 - 1521078 - G 74 -4.4 -4.88067 | gap 1, overlap 1521064 1521080 ACGCAGGCATAAAAA CA-CGCCGC GACTG GCGACGGTG CACAAGCAAACCTTG TERM 1384 1521096 - 1521080 - G 73 -7.2 -4.06182 | overlap 1521064 1521078 GCAGGCATAAAAACA CGCCGC GACTG GCGACG GTGCACAAGCAAACC BQ13060 1524435 - 1522021 - | hypothetical protein TERM 1385 1523224 - 1523208 - G 70 -2.9 -5.06451 | overlap 1523210 TAGGATTCGAAAAAA CACGCTG TGG CAACGTC ATGACAAAAGTTTTG TERM 1386 1524371 - 1524361 - G 72 -3.2 -5.0133 | TATCCGCTCAAAAAA GATG ATA CACC ACATCAAAACGCGCG lysA 1525827 - 1524553 - | diaminopimelate decarboxylase TERM 1387 1524765 - 1524732 - G 73 -6.8 -4.14392 | opp_overlap 1524750 CCGTAATGGCTAAAA GATCGCC-TGCCGCCA AGAT CGGCA-CACGGCGATC TAATGCTAAATAATC TERM 1388 1525800 - 1525782 - G 78 -7.4 -4.40605 | overlap 1525784 ATGCAGAAAGAGAAA GACCTTCA GCA TGAAGGAC ACCCTGATTATAAGA TERM 1389 1525798 - 1525784 - G 77 -8.6 -3.79866 | overlap 1525782 GCAGAAAGAGAAAGA CCTTCA GCA TGAAGG ACACCCTGATTATAA TERM 1390 1527360 - 1527374 + H 79 -3.6 -5.43487 | AACCTTCATATCTTG TTGATG AGG CATTAA TTTTTTCTATAATTT BQ13100 1527496 - 1528200 + | Thiol 3adisulfide interchange protein TERM 1391 1528548 - 1528532 - T 81 -8 -4.1552 | CACCCTTTCAAGAAA CCCTTC ATCTG GAAGGG AAAAAACGATTTTCT BQ13120 1529560 - 1528706 - | ribonuclease RNAse BN transmembrane protein TERM 1392 1528818 - 1528804 - G 75 -2.8 -5.31519 | ACATGTAAAGAAAAA TAATGG CAA CCATAA TAGATGTTAACCCGG TERM 1393 1529119 - 1529108 - G 73 -2.2 -5.28166 | CAAAATTAATAAAAA GCTG ATCA CAAC AAGACCAATAGCTCC TERM 1394 1529245 - 1529226 - G 70 -7.9 -3.65199 | opp_overlap 1529213, overlap 1529213 AAGGCTGTACGCAAA GCCTCTA TTCCAT TAGAGGC AAAATAAGCCGCTCC tyrC 1531138 - 1530206 - | cyclohexadienyl dehydrogenase BQ13140 1531338 - 1531601 + | hypothetical protein TERM 1395 1531768 - 1531786 + T 72 -6 -4.38154 | opp_overlap 1531779 TTAGATAGATTCCTT GACGAAAA TAA TGTTCGTC TTTTATCAAACATAT holA 1532923 - 1531859 - | DNA polymerase III subunit delta TERM 1396 1533865 - 1533848 - R 72 -2.7 -5.2166 | TAATAATCCAAAAAA TATTACG CGGA CGAAATA ACGTTTCACCAATAA TERM 1397 1535256 - 1535266 + r 71 -6.8 -4.11183 | opp_overlap 1535228 AGGAATTTTTTTCGT TGCC ACA GGCA TTGTTTGTGCTGAAG TERM 1398 1535409 - 1535354 - R 90 -10.9 -3.85698 | gap 1, opp_overlap 1535355 1535356, overlap 1535356 1535357 GTGTTGCTGTAGAAA TACTGCCCTACGCTGATAAAAA AGTGAGTTCAAAA TTTTTATCAGCGTAGGGCA-CA TTCTGCGAGCACATT TERM 1399 1535355 - 1535409 + r 83 -10.3 -3.29043 | opp_overlap 1535354 1535356 1535357, overlap 1535356 TGTTGCTGTAGAAAT ACTGCCCTACGCTGATAAAAA AGTGAGTTCAAAA TTTTTATCAGCGTAGGGCACA TTCTGCGAGCACATT TERM 1400 1535408 - 1535356 - R 95 -13.8 -3.51934 | opp_overlap 1535356 1535355, overlap 1535354 1535357 GTTGCTGTAGAAATA CTGCCCTACGCTGATAAAAA AGTGAGTTCAAAA TTTTTATCAGCGTAGGGCAC ATTCTGCGAGCACAT TERM 1401 1535356 - 1535408 + r 89 -13.8 -2.57211 | opp_overlap 1535354 1535356 1535357, overlap 1535355 GTTGCTGTAGAAATA CTGCCCTACGCTGATAAAAA AGTGAGTTCAAAA TTTTTATCAGCGTAGGGCAC ATTCTGCGAGCACAT TERM 1402 1535407 - 1535357 - R 100 -17.3 -2.70946 | opp_overlap 1535356 1535355, overlap 1535356 1535354 TTGCTGTAGAAATAC TGCCCTACGCTGATAAAAA AGTGAGTTCAAAA TTTTTATCAGCGTAGGGCA CATTCTGCGAGCACA TERM 1403 1535682 - 1535672 - R 70 -4 -4.86385 | opp_overlap 1535672 ATCTTGAAAAATAAA TTCA CAT TGAA ATGTTATTTTTTTGT TERM 1404 1535804 - 1535788 - R 72 -9.5 -2.62983 | opp_overlap 1535782, overlap 1535791 CTCAGGGGTAGAGCA CAACCTT GCC AAGGTTG GGGTCGTGGGTTCGA thiD2 1536942 - 1536079 - | phosphomethylpyrimidine kinase TERM 1405 1536447 - 1536423 - G 76 -7.1 -4.15508 | AACCAAGTGCCAAAA GCTGTGGACCA TAT TGGTACATAGC GTCTAACGACCATCG TERM 1406 1537031 - 1537019 - H 82 -3.4 -5.72118 | AAAAAACATAAAAAA GAGA TATCT TCTC GCGTAAAGTGGGCTA plsC 1537074 - 1537880 + | 1-acyl-sn-glycerol-3-phosphate acyltransferase TERM 1407 1539289 - 1539302 + G 72 -3.1 -5.08824 | GAAAAAGCTGCACAA CTTCT TGAA AGAGG TTTTTTGCATCAAGG dacA3 1538524 - 1539621 + | penicillin-binding protein TERM 1408 1539610 - 1539600 - T 80 -6.8 -4.72272 | CCGCCCTATGAAAAA GGCT TCA AGCC ACACTCGATGATCCT BQ13240 1541581 - 1540838 - | hypothetical protein TERM 1409 1541561 - 1541551 - G 70 -3.2 -4.90525 | CAATTGCAAACAAAA CACA TGT TGCG AAGAATCTATTGAAT accA 1542576 - 1541620 - | acetyl-CoA carboxylase carboxyltransferase subunit alpha xerD 1543602 - 1542655 - | integrase /recombinase xerD TERM 1410 1544332 - 1544315 - gH 76 -6.3 -4.4784 | CAAACCCTAAAGAAA CCATGAA AAAA CTCATGG AACAACGCTACCCTA aroK 1543864 - 1544496 + | shikimate kinase TERM 1411 1545158 - 1545176 + GF 70 -8.2 -3.28712 | GCTATTGTCCGCTCA TGTCAGTT TAA AGCTGACA TTGTAGCACGCGACG TERM 1412 1545493 - 1545482 - gf 78 -3 -5.47159 | GCGCAAGATAAAAAA GTTT CGCA AAAC AACTTGACCTTCATC TERM 1413 1545539 - 1545570 + GF 100 -11 -4.36914 | opp_overlap 1545546, overlap 1545546 GGTCAATCATTTATT GCAAAAACTGTTTC ACCA GAAGCAGTTTTGGC TTTTCTGGAACAAAA TERM 1414 1545546 - 1545563 + GF 74 -6.3 -4.4595 | opp_overlap 1545546, overlap 1545539 CATTTATTGCAAAAA CTGTTTC ACCA GAAGCAG TTTTGGCTTTTCTGG aroB 1544471 - 1545604 + | 3-dehydroquinate synthase BQ13290 1546008 - 1546403 + | hypothetical protein BQ13300 1546423 - 1546815 + | hypothetical protein phaG 1547252 - 1546851 - | putative monovalent cation/H+ antiporter subunit G phaF 1547530 - 1547249 - | putative monovalent cation/H+ antiporter subunit F phaE 1548012 - 1547527 - | putative monovalent cation/H+ antiporter subunit E phaD 1549631 - 1548009 - | putative monovalent cation/H+ antiporter subunit D TERM 1415 1548596 - 1548586 - G 86 -2.4 -5.89921 | ACCAGAAGAAAAAAA GCGC CGA GTGC TAAAGTTGAAGAAAC TERM 1416 1549413 - 1549403 - G 70 -5.4 -4.38092 | CAAGAACCAAAACAA TTCC GAA GGAA GAGGGCCAATTTCCA phaC 1549972 - 1549631 - | putative monovalent cation/H+ antiporter subunit C phaA 1552893 - 1549972 - | putative monovalent cation/H+ antiporter subunit A TERM 1417 1550701 - 1550687 - G 89 -4.3 -5.64274 | TGAGTCAGAAAAAAA TCAGA AACTG TCTGA CCTTGAGGGCGTGTC TERM 1418 1551164 - 1551150 - G 100 -7.2 -6.08563 | opp_overlap 1551152 AACACACAAAAAAAA TACAGT GCA ACTGTA TCTGCAAACAGCGTG TERM 1419 1552502 - 1552491 - G 83 -3.6 -5.5943 | AAACTACCAAAAAAA CGAG ATTA CCCG ACAAGACTATTCCTG TERM 1420 1552836 - 1552825 - G 73 -2.2 -5.26875 | TGTCGAACGAAAAAA GCTA ATAA CAGC ACTTCCAGCGAAGGG BQ13370 1553575 - 1553090 - | transmembrane protein TERM 1421 1553142 - 1553156 + g 76 -3.6 -5.18726 | GGTCCATGAAAAGGC TGATAG CTA TTATCA TTTTTATTGTAAGAA TERM 1422 1554094 - 1554084 - g 70 -3.2 -4.98616 | CTAAAACACCAAAAA CCAT TCA ACGG GGTTTAAGGTTAAAT nspC 1553747 - 1554844 + | carboxynorspermidine decarboxylase TERM 1423 1555979 - 1555993 + G 72 -10 -2.73309 | opp_overlap 1555969, overlap 1555979 1555981 ATACAGCTGGTGTAC CAGCAG CAG CTGCTG CTCTTCTTATTGCCA BQ13390 1554904 - 1556142 + | hypothetical protein TERM 1424 1556190 - 1556161 - T 75 -10.1 -2.6914 | opp_overlap 1556166, overlap 1556166 TATTCTTTATATAAG GAAAACCGCTCCT AAAA AAGAGCGGTTTTT TTAAAATATACAATG TERM 1425 1556166 - 1556185 + T 93 -7.8 -5.45726 | opp_overlap 1556161 1556166 TTTATATAAGGAAAA CCGCTCCT AAAA AAGAGCGG TTTTTTTAAAATATA TERM 1426 1556185 - 1556166 - T 100 -10 -4.53034 | opp_overlap 1556166, overlap 1556161 TTTATATAAGGAAAA CCGCTCCT AAAA AAGAGCGG TTTTTTTAAAATATA TERM 1427 1556238 - 1556223 - T 72 -4.8 -4.77157 | TCAATCCACCAAAAA TAAAAG GCAC CTTTTA CGCTTCTTCAAAAAG TERM 1428 1557023 - 1557062 + T 70 -4.4 -4.78237 | gap 1, overlap 1557025 ATGTTAGAGCTCTTC CTGGTAACATACCTGTT CTTCACA AAC-GGAACGTTACCAG TTTTATTCTCAAATC pdhD1 1558504 - 1557098 - | dihydrolipoamide dehydrogenase TERM 1429 1558227 - 1558240 + g 73 -6.7 -4.30987 | ATGCCACTTGTATTT GCTGT TACA ACAGC TTTCTTATGCGCCAT sucB 1559769 - 1558537 - | dihydrolipoamide acetyltransferase TERM 1430 1558679 - 1558656 - G 70 -9.6 -2.72799 | overlap 1558653 GCGCCAGATACATCA TGGGGCAAAT TATA ATTTGCCCCC CAACAACCATTGCTC kgd 1562799 - 1559800 - | alpha-ketoglutarate decarboxylase TERM 1431 1559966 - 1559977 + g 76 -4.4 -5.1615 | GGTTCAATAAACGAC CATG CCCC CATG TTTTTTGGCTCTTCC TERM 1432 1562953 - 1562912 - R 71 -8.9 -3.1247 | opp_overlap 1562914, overlap 1562928 ACTTTTTATATCCAA TGTTTCACCTGGATAAGGA TATA TCCTTATCCAGATAAAATT TTCTCTTATCCTCTC TERM 1433 1562914 - 1562951 + r 100 -11.5 -4.75289 | opp_overlap 1562912 1562928 TTTTTATATCCAATG TTTCACCTGGATAAGGA TATA TCCTTATCCAGATAAAA TTTTCTCTTATCCTC sucD 1563861 - 1562959 - | succinyl-CoA synthetase subunit alpha TERM 1434 1563740 - 1563755 + g 70 -3.2 -4.86001 | overlap 1563737 CCTCCTTTTTTGGGA TGGATG CCAC CAACCA TTTTTGTACCATAAT sucC 1565061 - 1563865 - | succinyl-CoA synthetase subunit beta TERM 1435 1565145 - 1565126 - R 72 -8 -3.41704 | opp_overlap 1565126 1565124 1565122 1565137, overlap 1565124 ATAACATTTTAAATA TTCTGTTT TCAT AAACAGAA TCTCGTTTAATTTAT mdh 1566119 - 1565157 - | malate dehydrogenase BQ13460 1567580 - 1566405 - | hypothetical protein TERM 1436 1566968 - 1566943 - G 70 -9.1 -3.13403 | opp_overlap 1566950 1566961, overlap 1566950 GTGTTTGCATCAAGA TTGACAACACG GACA CGTGTTTTCAA AACTTCTATAAAAGG TERM 1437 1567335 - 1567314 - G 73 -5.9 -4.57912 | opp_overlap 1567319 CAAACAAGAAAAGAA CAAATCCAT CAGC ATGGTTTTG CCTCGTCCTACTTCA BQ13470 1568218 - 1567679 - | Outer membrane lipoprotein TERM 1438 1568625 - 1568614 - g 74 -4.4 -4.99035 | TCATCCACACAAAAA GAAG CTGA CTTC CGCATTGAAATATGG TERM 1439 1569233 - 1569254 + G 74 -3.7 -5.03747 | overlap 1569236 1569252 1569253 TTGTTATGACAGGTC CAACCAAGT ATGA ATTTGGTGG TTTTTTAAACCCTTT dapF 1568449 - 1569300 + | diaminopimelate epimerase TERM 1440 1570444 - 1570432 - g 78 -2.7 -5.49234 | overlap 1570421 1570420 ACAGTCAACAAAAAA TTCTC GTT GAAAA AAATGAAATAGGGCG BQ13490 1569300 - 1570583 + | hypothetical protein ftsY 1570598 - 1571821 + | cell division protein ftsY TERM 1441 1572306 - 1572321 + G 100 -3.2 -6.11019 | opp_overlap 1572308, overlap 1572308 GGGGTGGCAAAAACT TACCCA TCGT TGGGCA TTTTTTTTCATTTTT ispZ 1571818 - 1572507 + | intracellular septation protein A TERM 1442 1572509 - 1572534 + F 80 -7.1 -4.52803 | opp_overlap 1572509 1572512 AATTCGATTCTTAAA TAATTTGTATT TATC GATACAAATTA TTTTGTAGATTTATC TERM 1443 1572936 - 1572950 + G 78 -7.2 -4.47686 | ATCATTATCCTACTA TTTTCC CCA GGAAAA TTTACTTTTTTCTGG gloB 1572577 - 1573338 + | hydroxyacylglutathione hydrolase parB 1574708 - 1573803 - | chromosome partitioning protein, parb TERM 1444 1574387 - 1574366 - G 77 -10.9 -2.8085 | overlap 1574365 GCAATTGATTTAAAT TTGCGCGCT GTGC AGCACGCAA CCGCCGCTCTCCAGC parA 1575554 - 1574757 - | chromosome partitioning protein para gidB 1576208 - 1575561 - | glucose-inhibited division protein B TERM 1445 1575658 - 1575645 - G 73 -8.1 -3.93262 | TTTTAACAGATCAAA CTGCC AATT GGCAG AGGCATTTGTTATTT gidA 1578076 - 1576208 - | tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA TERM 1446 1576421 - 1576401 - G 79 -9.7 -3.62478 | GAAGGAATTTCTAAA CGCTCGTCA CGT TGAAGAGCG GAAATATCCTGTGCT TERM 1447 1577479 - 1577490 + g 73 -5.8 -4.59773 | TTTTACTAAGACGGG CAGG GGTT CCTG TTTTTAACCGTCCAA trmE 1579496 - 1578186 - | tRNA modification GTPase TrmE rho 1580794 - 1579529 - | transcription termination factor Rho TERM 1448 1580650 - 1580662 + g 72 -3.4 -5.03314 | CGATAATTTCTATAT CTTG AGAAG CAAG TTTTTTCAAAATAGC