TransTermHP v2.07 (built on Jan 21 2009) 25 bins; sample size is 20000000 --pval-conf=/fs/szasmg2/carlk/TTupdate2/expterm.dat --gc=-2.3 --au=-0.9 --gu=1.3 --mm=3.5 --gap=6 --max-len=59 --min-stem=4 --max-loop=13 --min-loop=3 --uwin-length=6 --uwin-require=3 --max-hp-score=-2 --max-tail-score=-2.5 --loop-penalty=1,2,3,4,5,6,7,8,9,10,11 --start-cut=0 --end-cut=25 Genes: 0.397987 %AT, 1767619 nt, 14014 terms. Intergenic: 0.463889 %AT, H2T: 197061 nt, 2001 terms; T2T: 66429 nt, 1681 terms; H2H: 70035 nt, 1298 terms. Each terminator entry starts in column 3 and is of the form: term # start - end +/- regionconf hp tail | notes Followed by the sequence of the 5' tail, 5' stem, loop, 3' stem, and 3' tail. Genes are interspersed, and start the first column. SEQUENCE gi|119025018|ref|NC_008618.1| Bifidobacterium adolescentis ATCC 15703, complete genome (length 2089645) TERM 1 331 - 290 - g 71 -6.6 -4.2237 | gap 1 AAATGAAGCCGAAAA CGGAGGAACAGC-CGGA GGAAACCTA TCCGCGCTTCTCCCCCG CGAAATCGCCGGCGA dnaA 1 - 1500 + | chromosomal replication initiator protein DnaA TERM 2 1546 - 1568 + F 100 -15 -4.8048 | CAACGGTTTTCCTTA GGCTGGTAAA TTA TTTACCAGCC TTTTTACTATCCGCG dnaN 1997 - 3121 + | DNA polymerase III subunit beta recF 3200 - 4411 + | recombination protein RecF BAD_0004 4411 - 4896 + | hypothetical protein TERM 3 4947 - 4922 - f 70 -9.8 -3.36803 | opp_overlap 4922 GAAGTCGACTTACAA TCGACCTCTC TGACAG GAGAGATCGA TTGTGGCGCGCGTGA gyrB 5177 - 7315 + | DNA gyrase subunit B TERM 4 8906 - 8885 - g 93 -14.5 -3.73953 | overlap 8898 ACGAGCTGGACGAAA TCGTCGCCA AGTA TGGCGACGA ACGCCGTACCAAGAT TERM 5 10046 - 10019 - g 70 -10.6 -3.55203 | gap 1, overlap 10030 AAAACTCCGCTGAAA CCGGTA-CGGAAG CCA CTTCCGATGCCGG CGATGGCGAGAATGT gyrA 7411 - 10071 + | DNA gyrase subunit A TERM 6 10333 - 10302 - g 89 -10 -4.57341 | gap 1, overlap 10303 10304 AAGGTTCGTGAAAAA GCGCGTCGTGGCGCG CCT CGCGCC-CGCCGCAT GAGCCTGTCCCTGAC TERM 7 10332 - 10303 - g 81 -13.5 -3.33922 | gap 1, overlap 10302 10304 AGGTTCGTGAAAAAG CGCGTCGTGGCGCG CCT CGCGCC-CGCCGCA TGAGCCTGTCCCTGA TERM 8 10331 - 10304 - g 76 -14.8 -2.60032 | gap 1, overlap 10303 10302 GGTTCGTGAAAAAGC GCGTCGTGGCGCG CCT CGCGCC-CGCCGC ATGAGCCTGTCCCTG BAD_0007 10146 - 10682 + | hypothetical protein TERM 9 10747 - 10778 + T 100 -19.5 -4.85918 | opp_overlap 10747 CGTGCAACATAAGAA GACGGCGCTTCCC TACTTC GGGAGGCGCCGTC TTTTCTTATGTAATC TERM 10 10778 - 10747 - T 100 -17.3 -3.9644 | opp_overlap 10747 CGTGCAACATAAGAA GACGGCGCTTCCC TACTTC GGGAGGCGCCGTC TTTTCTTATGTAATC TERM 11 10891 - 10863 - T 100 -20.4 -4.36931 | opp_overlap 10888 10889 TAACGCATATGAAAA CGGTCCGTGCGA ACGAA TCGCACGGACCG TTGAAACGGATTGTG gdhA 12261 - 10915 - | glutamate dehydrogenase mscL 12452 - 12895 + | large-conductance mechanosensitive channel TERM 12 12937 - 12964 + F 100 -11.2 -5.04868 | TTGATTTGATGATTC CGGCCGCTTGTG GGTA TGCGGGCGGCCG TTTTATTTGGTTTGC TERM 13 13049 - 13028 - f 100 -14.5 -4.87626 | opp_overlap 13023 13028 GCTGAATACGAAAAA GGCTTCCGA TTAC TCGGAAGCC TTCAATTCTGTGGAG TERM 14 13028 - 13049 + F 95 -14.5 -3.26449 | opp_overlap 13028, overlap 13023 GCTGAATACGAAAAA GGCTTCCGA TTAC TCGGAAGCC TTCAATTCTGTGGAG TERM 15 13220 - 13232 + F 73 -10.5 -3.36785 | opp_overlap 13220 CCATAGGTGAAAAAA GCGGC TAT GCCGC TTCCTTACCATCTAC TERM 16 13232 - 13220 - f 100 -10.5 -5.07567 | opp_overlap 13220 CCATAGGTGAAAAAA GCGGC TAT GCCGC TTCCTTACCATCTAC TERM 17 13525 - 13511 - f 71 -11.4 -2.91144 | overlap 13508 TGATTTCCGAAACGA CGGCGA GCA TCGCCG GCATGCGGGTGGCCA BAD_0010 13528 - 14124 + | metal-dependent hydrolase BAD_0011 15487 - 14138 - | hemolysin-like protein icfA 16250 - 15555 - | carbonic anhydrase TERM 18 16530 - 16577 + r 100 -24.9 -2.78463 | gap 1, overlap 16528 TTGAATCCGGGAACG CGAGCGGGGAGG-CCCGCGCCG TTTAT CGGCACGGAACCTCCCCGCTCG TATCATCCAGGCGGT ribAB 17352 - 16714 - | 3,4-dihydroxy-2-butanone 4-phosphate synthase pra 17823 - 17422 - | PE family protein (fragment) TERM 19 17989 - 17948 - R 83 -7.3 -4.57533 | gap 2, opp_overlap 17964, overlap 17958 AAGAATAGGACAAAA CGCCG--GATAACGCGAGC GGGGAG GCCCGCGCTGTCAACGGCG TAGGCCTCCCCGTTC TERM 20 18008 - 17958 - R 100 -17.5 -3.33009 | gap 1, opp_overlap 17964, overlap 17948 CAAAACGCCGGATAA CG-CGAGCGGGGAGGCCCGCGCTG TCAA CGGCGTAGGCCTCCCCGTTCATCG AGCGGTCGGTCAGCC TERM 21 17964 - 18001 + r 100 -22.7 -3.14564 | opp_overlap 17948 17958 GCCGGATAACGCGAG CGGGGAGGCCCGCGCTG TCAA CGGCGTAGGCCTCCCCG TTCATCGAGCGGTCG rps8E 18501 - 18079 - | SSU ribosomal protein S8P TERM 22 19308 - 19359 + r 100 -19.4 -2.71364 | gap 1, overlap 19306 GCTAGGGCCGCGCGA CGCGAGCGGGGAGG-CCCGCGCC ATTTATC GGCACGGAACCTCCCCGCTCGCA TCATTCAGGCGGTCA BAD_0016 20613 - 19708 - | hypothetical protein BAD_0017 21538 - 20714 - | phage-associated protein BAD_0018 21954 - 21535 - | hypothetical protein BAD_0019 23174 - 22263 - | hypothetical protein TERM 23 23316 - 23349 + H 83 -14 -2.82623 | overlap 23314 23348 CCTGCTTATTCATGG TGACGCGTCGGTTT TCTCCT GAACTGACGCGTCA TGCTTATCCAGCAGG TERM 24 24289 - 24265 - H 86 -12.2 -3.83998 | gap 1 CCATGCCAGATGAAA CGCC-CGAGGT TAAC ACCTCGTGGCG AAACGGCAGTGCAGG TERM 25 26701 - 26681 - g 77 -11.2 -3.58726 | TGCCGGTACAGACAA GCTTCCTG ATAAG CAGGAAGC TGAAGTGAGTGCTCG ybfG 24357 - 26753 + | hypothetical protein TERM 26 26757 - 26813 + T 86 -11.8 -3.85567 | opp_overlap 26763 26764 26767, overlap 26764 26770 CCAAGACGGTAGCTC GCATAAT-GCATTATGTGTGGGCAGATG TGT CGTCTGCCCACACATTC-GCTGTTGTGC TTTCGATTTGGAATT TERM 27 26764 - 26805 + T 84 -13.1 -3.38112 | gap 1, opp_overlap 26764 26763 26767, overlap 26757 26770 GGTAGCTCGCATAAT GCATTATGTGTGGGCAGATG TGT CGTCTGCCCACACATTC-GC TGTTGTGCTTTCGAT TERM 28 26805 - 26764 - T 75 -13.1 -2.57931 | gap 1, opp_overlap 26757 26764 26770, overlap 26763 26767 GGTAGCTCGCATAAT GCATTATGTGTGGGCAGATG TGT CGTCTGCCCACACATT-CGC TGTTGTGCTTTCGAT TERM 29 26803 - 26767 - T 72 -12.3 -2.5955 | opp_overlap 26764 26757 26770, overlap 26764 26763 AGCTCGCATAATGCA TTATGTGTGGGCAGATG TGT CGTCTGCCCACACATTC GCTGTTGTGCTTTCG TERM 30 26770 - 26800 + T 100 -20.6 -3.22841 | opp_overlap 26767 26764 26763, overlap 26764 26757 TCGCATAATGCATTA TGTGTGGGCAGATG TGT CGTCTGCCCACACA TTCGCTGTTGTGCTT BAD_0021 27488 - 26853 - | hypothetical protein TERM 31 27444 - 27483 + g 89 -17.1 -3.14564 | gap 1 GCCGTGCGACGCGAA CGGGGAGG-CCCGCGCCG TCAAT CGGCACGGAACCTCCCCG TTCATCAAGCGGTCG TERM 32 27567 - 27593 + G 73 -8.7 -3.85698 | gap 1 AGTGTCACAAAGCCC CTGCCGCTCTGG GTAC CCAG-GTGGCGG TTTATGAGGACAGCA BAD_0022 27518 - 28351 + | hypothetical protein TERM 33 28367 - 28409 + T 83 -15 -2.78816 | opp_overlap 28359 TCAATCATGATTGTG ATCGCATTGCGTGGAATG ATTCAGC CATTCCACGCAATGCGCC TCTGGTAAAACGTCA BAD_0023 29057 - 28422 - | hypothetical protein TERM 34 29128 - 29177 + r 100 -21.4 -4.3739 | gap 1 CTAGGGCCGTGCGAC GCGAACGGGGAGG-CCCGCGCCG TTTAT CGGCACGGAACCTCCCCGCTCGC TTTTGTCAGGCGGTC BAD_0024 31958 - 29202 - | hypothetical protein TERM 35 31126 - 31110 - G 73 -10.8 -3.67597 | opp_overlap 31123 31123 TCCCGGATGGAAGAA CGCCGG GCACA CCGGCG GCACGAGGCCGGCCT TERM 36 32005 - 32021 + H 80 -9.4 -4.18908 | CGGTCTGTCGGTCCT TCGCGG CACCT CCGCGA TTGTTTTGGCCGTCT BAD_0025 32160 - 33992 + | hypothetical protein opuE 34050 - 35645 + | sodium_proline symporter TERM 37 35687 - 35731 + T 100 -22.3 -3.31144 | opp_overlap 35694, overlap 35690 35694 AATCCGCCATTTGTA AGCGAAATGGGTCGGGAACCG ATG TGGTTCCCGACCCATTTCTCG TTGTGAACGTGCGAA TERM 38 35690 - 35728 + T 100 -27 -2.83271 | opp_overlap 35694, overlap 35687 35694 CCGCCATTTGTAAGC GAAATGGGTCGGGAACCG ATG TGGTTCCCGACCCATTTC TCGTTGTGAACGTGC TERM 39 35694 - 35724 + T 100 -22 -4.1021 | opp_overlap 35694, overlap 35690 35687 CATTTGTAAGCGAAA TGGGTCGGGAACCG ATG TGGTTCCCGACCCA TTTCTCGTTGTGAAC TERM 40 35724 - 35694 - T 100 -21.3 -3.75629 | opp_overlap 35694 35690 35687 CATTTGTAAGCGAAA TGGGTCGGGAACC GATGT GGTTCCCGACCCA TTTCTCGTTGTGAAC trpS 36884 - 35784 - | tryptophanyl-tRNA synthetase BAD_0028 37011 - 37382 + | hypothetical protein TERM 41 37405 - 37430 + T 100 -16.9 -5.72254 | opp_overlap 37405 GATTTTTTCAACGAA TGGCCCGTGGT TTCG ACCGCGGGCCA TTTTTTATTATTTCG TERM 42 37430 - 37405 - T 95 -14.7 -3.34013 | opp_overlap 37405 GATTTTTTCAACGAA TGGCCCGTGGT TTCG ACCGCGGGCCA TTTTTTATTATTTCG BAD_0029 37955 - 37518 - | hypothetical protein TERM 43 38082 - 38092 + H 70 -3.2 -4.69464 | overlap 38085 AATGGGCGCCATACG TTGC GTT GCAG TTTTTGCAATGTTTT TERM 44 38085 - 38103 + H 84 -6 -5.00616 | overlap 38082 GGGCGCCATACGTTG CGTTGCAG TTT TTGCAATG TTTTTTGCAAACGAA TERM 45 40141 - 40107 - g 71 -9.2 -3.7282 | overlap 40108 CCAGCTGATCAACAA CGTCGTCCGCGTCATC AAC AACGACCCGGACGTCA AGGGCAAGCTGAACG glgP 38284 - 40740 + | glycogen phosphorylase TERM 46 40828 - 40873 + F 83 -7.8 -4.64766 | gap 2, opp_overlap 40840, overlap 40840 AATGGGCGGATAAGT GATGACGACGAAGGCCCTTGGG ATTT TCCAAGGGCCTTT-TCGT-ATG TTTTTCGCATGTCCG TERM 47 40863 - 40840 - f 87 -13.9 -3.23395 | opp_overlap 40828 40840 AGTGATGACGACGAA GGCCCTTGG GATTTT CCAAGGGCC TTTTCGTATGTTTTT TERM 48 40840 - 40863 + F 100 -14.6 -4.50259 | opp_overlap 40840, overlap 40828 AGTGATGACGACGAA GGCCCTTGGG ATTT TCCAAGGGCC TTTTCGTATGTTTTT TERM 49 41020 - 40999 - g 100 -13.1 -5.56372 | AAAGCAAAAGAAAAA CCCTGTATC GCAA GATACAGGG CGAAGCAACAAACCC pbp1A 40845 - 41195 + | membrane carboxypeptidase BAD_0032 41217 - 42377 + | hypothetical protein BAD_0033 42641 - 43915 + | N6-adenine-specific methylase TERM 50 44059 - 44032 - T 100 -11.3 -5.16237 | opp_overlap 44032 AAGCGGATGAAAAAA GACGCCGGATC GCAAAG AACCCGGCGTC TTTTGAATAAGCCTC TERM 51 44032 - 44059 + T 77 -8.4 -4.18494 | opp_overlap 44032 AAGCGGATGAAAAAA GACGCCGGAT CGCAAAGA ACCCGGCGTC TTTTGAATAAGCCTC BAD_0034 44572 - 44105 - | putative septation inhibitor protein TERM 52 45401 - 45387 - g 70 -5 -4.4648 | AGGTCGACGAGAAAA CGAAAC TGC ATTTCG ACGCGACCGACGCGT BAD_0035 44708 - 45487 + | hypothetical protein BAD_0036 45494 - 46588 + | hypothetical protein pabA 46667 - 47314 + | Para-aminobenzoate synthase glutamine amidotransferase component II TERM 53 47380 - 47432 + T 95 -14.5 -3.26433 | gap 2, opp_overlap 47395, overlap 47382 47395 47424 CAAGGTTTTTACGGT ACGG-GAT-ATGAAAAAGGAGCGGC GTTGA GCCGCTCCTTTTTCATCATCACTGA TTAGTGCTGTGGTTG TERM 54 47382 - 47429 + T 100 -19.5 -2.80988 | gap 1, opp_overlap 47395, overlap 47380 47395 47424 AGGTTTTTACGGTAC GGGAT-ATGAAAAAGGAGCGGC GTTGA GCCGCTCCTTTTTCATCATCAC TGATTAGTGCTGTGG TERM 55 47415 - 47395 - T 100 -14 -4.80882 | opp_overlap 47395 47382 47380 ACGGGATATGAAAAA GGAGCGGC GTTGA GCCGCTCC TTTTTCATCATCACT TERM 56 47395 - 47415 + T 100 -14 -4.77438 | opp_overlap 47395, overlap 47382 47380 ACGGGATATGAAAAA GGAGCGGC GTTGA GCCGCTCC TTTTTCATCATCACT pknB 49493 - 47433 - | serine-threonine protein kinase TERM 57 48535 - 48507 - G 72 -13 -3.06796 | GGTGACCGGATTGAA CGCCTGCGTCGG CGCAT CCGTCGCCGGCG CCATGGGCACGGTGG pknA 50434 - 49490 - | serine-threonine protein kinase pbpA 51897 - 50431 - | penicillin binding protein transpeptidase TERM 58 50999 - 50987 - G 71 -7.7 -4.07687 | ATCGGGCTGTCAAAA CCAAG TTT CTTGG CCATGGACGAGACGG rodA 53473 - 51890 - | protein involved in cell wall formation and stabilization of the FtsZ ring during cell division BAD_0042 55092 - 53470 - | phosphoprotein phosphatase TERM 59 53506 - 53521 + g 70 -3.2 -4.59853 | overlap 53504 53514 53516 CTTGTTGGTCTGCGC GGCC TGATCGGC GGCC TTTTTCGCCGCTTCG TERM 60 53930 - 53952 + g 78 -9.8 -3.94853 | overlap 53923 AGTATGGTGATGATG CGGTTGCGGA ATT TGCGCGACCG TTTCGTCTTACGTTC BAD_0043 55604 - 55089 - | hypothetical protein TERM 61 55471 - 55501 + g 85 -12.5 -3.72141 | GCGCGCTCCTTACGA CGATGAGCCCGCG ACTTG CGCGGGCTGAGCG TTTCGATATCCCTGT BAD_0044 56340 - 55633 - | hypothetical protein BAD_0045 56490 - 59000 + | dipeptidyl peptidase IV TERM 62 59108 - 59051 - T 100 -22.1 -5.08831 | gap 1 GAAGAAAAAAAAGAA CGCGTCCCCCTGCGATTCGACGGACTGC CAA GTA-TCCGTCGGGTCACAGGGAGACGCG TAACCCTTCTCAATA BAD_0046 60515 - 59226 - | hypothetical protein TERM 63 60147 - 60119 - G 72 -12.5 -3.09327 | overlap 60104 60143 CCAGTTGACGGAACA GCTGGTCGCCTAT GGA ATAAGCGAGCAGC AGCAGCGCCACGAGA BAD_0047 61170 - 60505 - | response regulator of two-component system TERM 64 62112 - 62124 + G 79 -7.7 -4.56775 | GCAAAGCGCGCGTAT TCGGT CAC ACCGA TTTTTCCCCCGAACT BAD_0048 61460 - 62524 + | hypothetical protein TERM 65 62624 - 62611 - g 75 -2.3 -5.0133 | CAGTGGCGGAAAAAA CGTTC GAAC GCACG CCGAAAGACCTGATT BAD_0049 62598 - 63500 + | putative permease TERM 66 63580 - 63553 - f 100 -17 -5.72622 | opp_overlap 63548 63553 CGGACAAACAAAAAA GCCGGACACCCA CTTA CGGGCGTCCGGC TTCGCTTTGCTTAGC TERM 67 63553 - 63580 + F 95 -14.1 -3.33399 | opp_overlap 63553, overlap 63548 CGGACAAACAAAAAA GCCGGACACCC ACTTAC GGGCGTCCGGC TTCGCTTTGCTTAGC BAD_0050 63623 - 64252 + | hydroxyacylglutathione hydrolase BAD_0051 64283 - 64600 + | transport system permease protein TERM 68 64672 - 64637 - T 95 -17.8 -2.91395 | opp_overlap 64642, overlap 64642 ACGTTTTGGATAAAG CAAAAGGGCTGGAATC GTTG GATTCCAGCCCTTTTC GGCCCGTGCGAGCGG TERM 69 64642 - 64667 + T 100 -17.7 -4.08767 | opp_overlap 64642 64637 TTGGATAAAGCAAAA GGGCTGGAATC GTTG GATTCCAGCCC TTTTCGGCCCGTGCG TERM 70 64667 - 64642 - T 100 -17.7 -4.61873 | opp_overlap 64642, overlap 64637 TTGGATAAAGCAAAA GGGCTGGAATC GTTG GATTCCAGCCC TTTTCGGCCCGTGCG BAD_0052 65508 - 65182 - | hypothetical protein ygaT 66023 - 65538 - | hypothetical protein TERM 71 65779 - 65793 + g 78 -5 -4.7254 | GTGTCATTCAATGGT TGCAAG GCG TTTGCA TTTTTAGTGGGGAAT TERM 72 65999 - 66015 + g 78 -5.1 -4.86133 | opp_overlap 66002, overlap 66002 CCAAAATAGTCGCAA TAACACG TAA CGTGTTC TTTTTCATATATATG TERM 73 66002 - 66012 + g 76 -6.8 -4.51891 | opp_overlap 66002, overlap 65999 AAATAGTCGCAATAA CACG TAA CGTG TTCTTTTTCATATAT TERM 74 67355 - 67367 + G 81 -4.8 -4.87665 | CACGCTGATACGAGT CAGC CATAC GCTG TTTTTGTCAGTAGCG recD 66140 - 67573 + | putative exodeoxyribonuclease V BAD_0055 67644 - 68375 + | response regulator of two-component system TERM 75 68414 - 68439 + T 72 -11.9 -2.81888 | overlap 68412 AAACGTATATGTGCT GTGACCGATTC TGGA GAATCGGACAC TCGTTGGGTTTAGGA TERM 76 68545 - 68522 - T 100 -11.7 -4.7497 | opp_overlap 68516 GGGAGGCATGAAAAA GCGCCGACG GGGGTT CATCGGCGC TTGAGCTGTTTTCAG tgt 70047 - 68587 - | queuine tRNA-ribosyltransferase TERM 77 69864 - 69826 - G 79 -12.9 -3.50853 | CTGCTCGAAGTAGAA CGCGTCGCGGCGGCCGG GCTTG CCGGGTTCCGCGCCGCG GGGATGCTCAATAAG degP 70216 - 72141 + | DO serine protease TERM 78 72339 - 72287 - f 78 -6.2 -4.70626 | gap 1, opp_overlap 72300, overlap 72278 72300 GAACAAGCCGAAAAA CG-GCGGAAAACAAGGGCTGTGCGA GCAA TCGCACGGCCCTTTTCGTATGCGCG GAACGCGCGCGACGA TERM 79 72300 - 72325 + F 100 -16.9 -4.34402 | opp_overlap 72287 72300 AACGGCGGAAAACAA GGGCTGTGCGA GCAA TCGCACGGCCC TTTTCGTATGCGCGG TERM 80 72325 - 72300 - f 100 -14.7 -4.18164 | opp_overlap 72300, overlap 72287 AACGGCGGAAAACAA GGGCTGTGCGA GCAA TCGCACGGCCC TTTTCGTATGCGCGG BAD_0058 72497 - 74806 + | cation-transporting ATPase V BAD_0059 75927 - 74857 - | L-asparaginase I TERM 81 75981 - 75992 + H 83 -7.2 -4.62984 | CGCCGTGTGCCGTTG CCGC GATT GCGG TTTTGTCTGTCGTCG TERM 82 77765 - 77777 + G 71 -7.7 -4.11773 | CACCGGAATTCCTTA TCGGT GAC ACCGA TTTTCCGCAATATTT BAD_0060 76153 - 77937 + | hypothetical protein fprA 78010 - 79470 + | ferredoxin/ferredoxin-NADP reductase TERM 83 79518 - 79559 + F 100 -30.5 -5.34555 | opp_overlap 79544 CAGGCTTCTTTCATG CGTCTTGGGTGTCCGATTC TGGA GAATCGGACACCCAAGACG TTTTTTATCCTGTAC htpX 79703 - 80833 + | protease HtpX-like protein TERM 84 81248 - 81274 + F 100 -7.4 -5.16133 | opp_overlap 81248 CCGCTCCACTCAAAA CCCTTGGAAT CGTTGGA ATTTCAAGGG TTTTTCTATTGTCGT TERM 85 82303 - 82333 + G 91 -8.3 -4.82819 | gap 1, overlap 82314 GCGACTTTTACGCCG TCGTTGT-CCGGCG GTTA CGACGGCACGACGA TTTTCTTCTGCTGTG BAD_0063 81673 - 82659 + | hypothetical protein pip 85323 - 82999 - | hypothetical protein TERM 86 83774 - 83812 + g 86 -17.7 -2.71681 | gap 1, opp_overlap 83808 GCGGTGGCCAGTGCA CG-TAGTTCGTCCGATTC ACCC GAATCGGACGAACTGGCG TCGTTGCCACCATTG TERM 87 84599 - 84627 + g 82 -13.1 -3.57462 | overlap 84600 GCGTTCTGGGCCTGT TTGCCCGCCTTGG TCG CCGAGGCGAGCAG TTTGCCCGTGGAATC TERM 88 84600 - 84626 + g 77 -14.4 -2.74263 | overlap 84599 CGTTCTGGGCCTGTT TGCCCGCCTTGG TCG CCGAGGCGAGCA GTTTGCCCGTGGAAT BAD_0065 88037 - 85326 - | hypothetical protein TERM 89 87564 - 87615 + g 70 -5 -4.4773 | gap 1, overlap 87611 GGTGTTGATCTGCTC GTCGATCGTGGTCGCGCC-CGTATC GGT GATTTTCGGCGCGATCGCGTTCAGC TTTTCGTTGATGTAG TERM 90 88505 - 88522 + G 72 -11.3 -3.28712 | opp_overlap 88499 ATCATCCAAGTCTCC GTAGGCG GCGC CGCCTAC TTCTCCGGGCAACGC fba 88346 - 89413 + | fructose-bisphosphate aldolase purA 89599 - 90885 + | adenylosuccinate synthetase TERM 91 90967 - 90940 - g 79 -12.6 -3.52539 | opp_overlap 90940 GAACGTCAATGACAA GTGCCGGTGGGC CTGT GCCTGCCGGCAC TTTGCGTATGGTGCG TERM 92 90940 - 90967 + G 100 -17 -3.727 | opp_overlap 90940 GAACGTCAATGACAA GTGCCGGTGGGC CTGT GCCTGCCGGCAC TTTGCGTATGGTGCG TERM 93 91352 - 91341 - g 78 -2.2 -5.03314 | gap 1, overlap 91343 TGGATGGTCAAAAAA GAGCC GAT GGC-C GGCGGCAGCGGCATT TERM 94 91382 - 91343 - g 75 -7.7 -4.14633 | overlap 91341 GATGGTCAAAAAAGA GCCGATGGCCGGCGGCA GCGGCA TTCCGCAAACCAACGGC GTGGTGATCTGCGGC BAD_0068 90933 - 92660 + | voltage gated channel protein TERM 95 93710 - 93682 - g 76 -10.2 -3.81022 | AAATGTGCAGAACAA CGTGCCGGACGC GCAGG GCGTGCGCCACG TGAAGGTGGCGGATG crcB2 92801 - 93943 + | protein crcB homolog 2 TERM 96 94741 - 94722 - g 70 -4.2 -4.54727 | gap 1, opp_overlap 94726 94727 CGGCGGAAACCAAAA CCGC-TGCC GAC GGCAAGTGG GCGTTTTCCGTTGCC BAD_0070 94436 - 95905 + | branched-chain amino acid ABC-type transport system permease components BAD_0071 95909 - 96892 + | branched-chain amino acid transport system permease protein TERM 97 97112 - 97091 - g 75 -7.9 -4.17316 | overlap 97092 ATTCGTCGAAAACAA GCCGGGCGT GCAC AAGCCCGAC CCGATCCTCGTGGCC BAD_0072 96966 - 97916 + | branched-chain amino acid transport system ATP-binding protein LivF 97918 - 98727 + | ABC-type branched-chain amino acid transport systems ATPase component LivF 99086 - 100387 + | branched-chain amino acid transport system substrate-binding protein TERM 98 100508 - 100462 - f 100 -17.9 -3.19371 | opp_overlap 100462, overlap 100452 AGCCACGCAACGCAA GGGGCGGTGCGACGCAAGCGA GATGA TCGCAAGTGTCTCACCGCCCC TTTTGCGGGCGGAAC TERM 99 100462 - 100508 + F 100 -20.1 -4.07568 | opp_overlap 100452 100462 AGCCACGCAACGCAA GGGGCGGTGCGACGCAAGCGA GATGA TCGCAAGTGTCTCACCGCCCC TTTTGCGGGCGGAAC TERM 100 101828 - 101778 - g 86 -13.3 -3.50045 | opp_overlap 101794, overlap 101772 AGGCAGATACGACAA GCGCCACGGGACGCAAGC-CGTACG AGC CGGACGTGCT-GATTCCCGTGACGC TCAAACTGGGCGATA BAD_0075 100769 - 101854 + | LacI-type transcriptional regulator TERM 101 101872 - 101834 - T 100 -19.6 -3.57144 | opp_overlap 101835 101847 101866 101866, overlap 101835 CCCGTGACGCTCAAA CTGGGCGATACCACCCGC TAA GCGGGCCGTATCGCCCAT CATTGGACGGGCCGT TERM 102 101835 - 101871 + T 100 -20.9 -2.70932 | opp_overlap 101834 101835, overlap 101847 101866 101866 CCGTGACGCTCAAAC TGGGCGATACCACCCGC TAA GCGGGCCGTATCGCCCA TCATTGGACGGGCCG TERM 103 101871 - 101835 - T 100 -23.1 -2.74144 | opp_overlap 101835 101847 101866 101866, overlap 101834 CCGTGACGCTCAAAC TGGGCGATACCACCCGC TAA GCGGGCCGTATCGCCCA TCATTGGACGGGCCG pabC 102868 - 101915 - | 4-amino-4-deoxychorismate lyase TERM 104 102883 - 102893 + H 71 -8.2 -3.8125 | overlap 102884 TGGGAACCTCTCTTC CGCG CTC CGCG TCTTTTGATTGCCGC TERM 105 103153 - 103139 - g 71 -8.5 -4.07687 | AGTTCGTTCGGAAAA GGCCG GACGG CGGCC GACGGGAAAGGTAAG BAD_0077 103080 - 103985 + | hypothetical protein TERM 106 105560 - 105505 - g 72 -11.8 -3.41051 | overlap 105508 GCACTCCTACTACAA GAAGCAGGTCGAAATCGCATCCAAGG TGGA CCGCGTCTACGACTTCGCCCTGCCTC CGCTGCTGCTGCACG TERM 107 105557 - 105508 - g 76 -9.9 -3.84406 | overlap 105505 CTCCTACTACAAGAA GCAGGTCGAAATCGCATCCAAGG TGGA CCGCGTCTACGACTTCGCCCTGC CTCCGCTGCTGCTGC spl 104792 - 106306 + | sucrose phosphorylase TERM 108 106495 - 106461 - f 85 -12.8 -3.61517 | opp_overlap 106461 AGTTGCGTTGAAGAA TCGCCCGAATGCGCTG AAG CAATGCGTCCGGGCGA TTTTCGTATGTGTCG TERM 109 106461 - 106495 + F 100 -12.8 -4.41353 | opp_overlap 106461 AGTTGCGTTGAAGAA TCGCCCGAATGCGCTG AAG CAATGCGTCCGGGCGA TTTTCGTATGTGTCG BAD_0079 106598 - 108190 + | hypothetical protein TERM 110 108500 - 108522 + F 100 -15.6 -5.06414 | opp_overlap 108494 TAACACACACGTTGA TGGCCCTGCA TAA TGCGGGGCCA TTTTTGTTGCAGCCC shiA 108669 - 110018 + | transmembrane transport protein TERM 111 110026 - 110000 - f 71 -7.2 -3.93148 | opp_overlap 110020, overlap 110001 110015 CAAGGAAACGAAGAA CGTCGACTTCAC CAA GTGACGCCGACC GGCTTGCCGGGCTGC TERM 112 110148 - 110128 - f 83 -7.5 -4.60949 | opp_overlap 110143 GACATCATAAAGAAA GCGGTACTA GAA CAGTTCCGC AGGAGAGGCGGAGTG ilvC2 110304 - 111356 + | ketol-acid reductoisomerase TERM 113 111425 - 111399 - T 93 -12.9 -4.06904 | opp_overlap 111399 TTAGCGAATTAGAAA GCGTCGCCCGC TTCGT GCGGACGGCGC TTTTTGCATATCGTC TERM 114 111399 - 111425 + T 100 -12.9 -4.7173 | opp_overlap 111399 TTAGCGAATTAGAAA GCGTCGCCCGC TTCGT GCGGACGGCGC TTTTTGCATATCGTC TERM 115 111505 - 111479 - T 100 -21.6 -3.9941 | opp_overlap 111479 TCCGGCATAACGAAA GGCCGCCACCCA ACT TGGGCGGCGGCC TTTAATCGCAGTTAA TERM 116 111479 - 111505 + T 100 -19.4 -3.74747 | opp_overlap 111479 TCCGGCATAACGAAA GGCCGCCACCCA ACT TGGGCGGCGGCC TTTAATCGCAGTTAA ilvC1 112593 - 111553 - | ketol-acid reductoisomerase BAD_0083 112996 - 114870 + | sialic acid-specific 9-O-acetylesterase aroP 116537 - 115008 - | aromatic amino acid transport protein AroP TERM 117 116476 - 116511 + g 73 -9.7 -3.9122 | gap 1, overlap 116470 AACGATTTACGGAGC GTCG-GCGGAACCGGC ACGTC GTCGGTTCCACGCGGC TTCTTTGCGGCGGTG TERM 118 116602 - 116617 + H 71 -10.4 -3.17382 | overlap 116586 116612 CTCGCTGCTTGCGTT GCGTGC TGTT GCACGC TTGCATGTGCTTGTT BAD_0085 116725 - 119886 + | hypothetical protein BAD_0086 121179 - 119905 - | Na(+)/H(+) antiporter-like protein TERM 119 121491 - 121453 - H 77 -11 -3.53012 | opp_overlap 121452 121453 121455 GTTTCTTCGGGGAAA CCGACCTAGGGGGCAT GATTCCT ACCCCCCCTAGGTCTG GATTTGCTCAAGGGA TERM 120 121615 - 121581 - H 87 -13.5 -3.29471 | opp_overlap 121580 121579 GTTTCACGACATTAA GGGGGTCGGTCGCGT TTGCG AGGCGGCCAACCCCC GGTTCTCGTCCGCCG TERM 121 121691 - 121731 + H 85 -12.6 -3.46602 | overlap 121693 GGTGGTTCGCCCCAT TTGCCAGTTCGGGGGTAT AAATC ATACCCCCGAACCGCCTA TTCTCGTCTAGCGCC TERM 122 121693 - 121729 + H 95 -15.2 -3.30651 | overlap 121691 TGGTTCGCCCCATTT GCCAGTTCGGGGGTAT AAATC ATACCCCCGAACCGCC TATTCTCGTCTAGCG BAD_0087 122116 - 122919 + | sortase-like protein aapA 123032 - 124609 + | amino acid permease TERM 123 124725 - 124679 - T 86 -12.5 -3.74693 | gap 1, opp_overlap 124678 124674 GCGCATCTGACGAAA GAGGGTCGGTGGAAAC-C TTGCGAAAATGT GCGTCTCCACCGACCCTC GTCGTGTAATCGCAA thiG 125704 - 124790 - | thiazole synthase BAD_0090 126568 - 125855 - | thiamine biosynthesis protein ThiF TERM 124 126092 - 126104 + g 75 -7.7 -4.17048 | CTCCAGCACCGCGTT GACGA GCA TCGTC TTGTTTTCCGGCACG BAD_0091 127216 - 128274 + | aldo/keto reductase family oxidoreductase TERM 125 128297 - 128341 + F 100 -11.5 -4.77759 | opp_overlap 128323 GCAATACGTACGATT GGCCGC-GCCCGATTCCGC ACAATAATC GC-GATTCGGGCCGCGGCC TTTTTCGTGCCTTCT TERM 126 128435 - 128377 - f 74 -7.6 -4.07568 | opp_overlap 128389 128392, overlap 128392 TTGCTCGCTGCAAAA TCGCCCTGGGAATAACTTACACTGTAAA ATG TTTACACTGTAAGATATTATGACGGCGA TTGCGACGGAAGGAG TERM 127 128420 - 128392 - f 74 -10.5 -3.61398 | opp_overlap 128389 128392, overlap 128377 TCGCCCTGGGAATAA CTTACACTGTAAA ATG TTTACACTGTAAG ATATTATGACGGCGA TERM 128 128698 - 128674 - g 83 -2.1 -5.26316 | GCACTGGAGAAAAAA GGCCAGATC ACGCGCG AATCCGACC CTGACGATCGCCGTG BAD_0092 128458 - 128949 + | MarR-type transcriptional regulator BAD_0093 129076 - 130827 + | ABC transporter permease TERM 129 130895 - 130880 - g 76 -9 -4.07568 | TGGGGCCGTGGAAAA GCCGAA GGAC TTCGGC GGAGTGATGAAGAAG BAD_0094 130839 - 132680 + | ABC transporter permease TERM 130 132729 - 132707 - f 100 -15.6 -5.02074 | opp_overlap 132707 TGACTCGCTAAAAAA TCCGGAGGGA CCA CCCCTCCGGA TTTTTGCGTTTTGGC TERM 131 132707 - 132729 + F 100 -14.9 -4.87318 | opp_overlap 132707 TGACTCGCTAAAAAA TCCGGAGGG ACCAC CCCTCCGGA TTTTTGCGTTTTGGC BAD_0095 132851 - 133831 + | oxidoreductase BAD_0096 135049 - 133916 - | hypothetical protein TERM 132 134036 - 133996 - G 88 -3.2 -5.49568 | gap 1, overlap 133997 133998 AATCGAAAACAAAAA CGCTGCGCAGTTCATT-CG GGTC CGCAACGAACAGCGCCGTA GCCAACCCGTCCGCC TERM 133 135042 - 135056 + g 71 -6.4 -4.25283 | overlap 135038 GCGCTATATGTGGCA TGAGGC ATC GCCTTA TTTTGATACCCCCGT TERM 134 135068 - 135120 + H 71 -10.1 -3.61103 | overlap 135069 CTTATTTTGATACCC CCGTAGCTTTGTATAGTTACGATTA TAC TAATCGTGATTATACAGACCGACGC TTTGGCATGGAGTTC TERM 135 135069 - 135119 + H 79 -13.6 -2.7634 | overlap 135068 TTATTTTGATACCCC CGTAGCTTTGTATAGTTACGATTA TAC TAATCGTGATTATACAGACCGACG CTTTGGCATGGAGTT TERM 136 135247 - 135220 - H 70 -3.4 -4.7416 | overlap 135226 GGAAAACGGGAAAAA TAAAAACGGCGG AATT CCAACGTTTTTC CATGCGCGATACAAC TERM 137 135241 - 135226 - H 87 -2.4 -5.61881 | overlap 135220 CGGGAAAAATAAAAA CGGCGG AATT CCAACG TTTTTCCATGCGCGA TERM 138 136712 - 136698 - g 76 -5.6 -4.65933 | overlap 136699 GACGCGCAAAACAAA GTCGCC GCC GGCGAA GGCGTGGGCCTGGGT BAD_0097 135393 - 137180 + | hypothetical protein BAD_0098 137242 - 137901 + | hypothetical protein BAD_0099 138168 - 139439 + | hypothetical protein TERM 139 140713 - 140728 + G 72 -11.8 -3.40403 | overlap 140705 ATCGGTGCCACGGAC GGCGCG GTTT CGCGCC TTATGCTCGCCGAAA BAD_0100 139465 - 140964 + | ABC transporter permease BAD_0101 140995 - 142299 + | ABC transporter permease BAD_0102 142317 - 143192 + | ATP binding protein of ABC transporter TERM 140 143628 - 143593 - g 70 -4 -4.59773 | gap 1, overlap 143597 143602 143616 GTCCATCTCCAAAAA GCATC-AGAACGACTTC GCC AAAGCCGTGCCGGACGC GGTGGTCGGCAAGCC BAD_0103 143189 - 143746 + | hypothetical protein BAD_0104 144488 - 143811 - | TetR-type transcriptional regulator TERM 141 144076 - 144119 + g 77 -11.6 -3.65827 | overlap 144075 ACTTGTGCTGCGATC GCCTTCAGCGTGGCGTTGTC GGAA GACAGCACCACGCCCACGGC TTTCAATCCGAGTTC BAD_0105 146683 - 144488 - | putative phage infection protein TERM 142 146221 - 146252 + g 84 -10.2 -4.26559 | gap 1, overlap 146198 146219 CGCTGACCGTATCGG CGCCTTGGCCTGTGA TCT TCGGA-GCCAAGGCG TTCTTCTTTTCATTG TERM 143 146378 - 146389 + g 70 -3.6 -4.68456 | TTCGCCGGATTTGGT GCCG TTGA TGGC TTCTTTTTTGGTGGT BAD_0106 149508 - 146680 - | putative phage infection protein TERM 144 148794 - 148824 + g 70 -3.8 -4.5954 | overlap 148775 CGCTCGCCGCGGCCA GCTGCACGTCGTTC AGG GCATTGCGTGCTGC TTTTGTCTGCTGTGG TERM 145 148879 - 148900 + g 70 -10.1 -3.42013 | ATCCGCGATTGCGGA GCGGATCGT GCCT ACGTTCCGC TTGGTGTTGTCGAGT BAD_0107 149971 - 151275 + | hypothetical protein TERM 146 151302 - 151343 + F 95 -14.4 -3.67564 | overlap 151307 CGTTTTGCGGGTTTT GCTAAGCGGCTGGTCGGG CGATGT TCCGGCTGGCCGCTTTGC TTTGGGTGGCTGATT TERM 147 151307 - 151338 + F 88 -11.5 -4.08485 | overlap 151302 TGCGGGTTTTGCTAA GCGGCTGGTCGGG CGATGT TCCGGCTGGCCGC TTTGCTTTGGGTGGC TERM 148 152256 - 152230 - f 84 -5.8 -5.13137 | GAAACAAATGAAAAA GTCCTGAGAACC ATC GGCTTCCAAGAC TTCGAACCTGTGCCC TERM 149 152926 - 152912 - g 70 -10 -3.55622 | overlap 152921 CCGAACTGCTCGAAA CGTACG GAA CGTACG AATCGAACGGCATCA pepDB 152443 - 153948 + | dipeptidase TERM 150 154003 - 154042 + T 100 -23 -3.29511 | opp_overlap 154003 CACGCGTTCGGTAAA CGTTGAGGGGCTATCGAC TCGT GCCGATGGCCCCTCAACG TTATACGGGAATCAA TERM 151 154042 - 154003 - T 100 -23 -3.53224 | opp_overlap 154003 CACGCGTTCGGTAAA CGTTGAGGGGCTATCGAC TCGT GCCGATGGCCCCTCAACG TTATACGGGAATCAA BAD_0109 155123 - 154092 - | glycosyltransferase TERM 152 154890 - 154907 + g 70 -4.7 -4.4768 | overlap 154892 CGCAATGCCGGTGTT GACCGCG CCGC CGTGGCC TTTGTTCTCTTGATG BAD_0110 156200 - 155307 - | TetR-type transcriptional regulator TERM 153 155538 - 155577 + g 71 -5.5 -4.37711 | overlap 155539 155561 155572 CTTGGCGATCGCCTT CGCTTCCCGCGCGGC CTGCTTTTCC GCCTCGCGGGCGGCC TTTTCGCTTTCGTAG TERM 154 155876 - 155892 + g 71 -6.5 -4.26076 | AATCGCGCGTGAGCA CGCGGAA GCC TTCGGCG TTTTCCTCCACGTAG TERM 155 156896 - 156950 + H 91 -9.8 -4.62069 | CACCTTATTCCCCTG GCGGATCGGACATTCGTGGTGCGTCC GCA GGGCGGAGCCGGAGTGTCCGTTGCGC TTTTTAGGCTGGAGC TERM 156 157219 - 157195 - g 73 -4.9 -4.62783 | overlap 157196 GATGCAGCTGAAAAA GCTCCGGCTGA AAG TCAGCAGAAGT CCTCAGCTCAAGCTT ftsY 156967 - 158229 + | FtsY signal recognition particle TERM 157 158265 - 158307 + T 100 -27.3 -3.10464 | opp_overlap 158271, overlap 158271 TTGCGATTTCCGTAG CGAAAACCTCCCGTCACGT TCCGT ACGTGGCGGGAGGTTTTCG TATTGCGATTACTGC TERM 158 158301 - 158271 - T 100 -16.9 -4.18018 | opp_overlap 158265 158271 TTTCCGTAGCGAAAA CCTCCCGTCACGT TCCGT ACGTGGCGGGAGG TTTTCGTATTGCGAT TERM 159 158271 - 158301 + T 100 -19.1 -4.43012 | opp_overlap 158271, overlap 158265 TTTCCGTAGCGAAAA CCTCCCGTCACGT TCCGT ACGTGGCGGGAGG TTTTCGTATTGCGAT napA1 159506 - 158316 - | Na(+)/H(+) antiporter TERM 160 158790 - 158778 - G 74 -6.2 -4.57073 | GATGCCGGCGAAAAA CGCG CCCAC CGCG TAGCTCAACCCGGCC TERM 161 159580 - 159593 + H 70 -9.5 -3.33162 | TACATGCCACGCGCT CGCCG TACG CGGCG TTCTCCCGTCGCGTG amtP 159921 - 161216 + | ammonium transporter glnB 161218 - 161556 + | nitrogen regulatory protein N-II TERM 162 161681 - 161633 - f 81 -12.7 -3.14211 | gap 2, opp_overlap 161643 AGTTCGGGTTATCAA TTACGACACATCCCCGTACGTGC CTCGC GC-CGTGCGGGGAT-TGTCATAA GTCGTCATAGGTTTC TERM 163 161643 - 161672 + F 84 -12.9 -3.42996 | gap 1, opp_overlap 161633 ATCAATTACGACACA TCCCCGTAC-GTGC CTC GCGCCGTGCGGGGA TTGTCATAAGTCGTC glnD 161713 - 163539 + | protein-PII uridylyltransferase TERM 164 164036 - 163990 - g 73 -9.9 -3.57561 | opp_overlap 164027, overlap 164009 TTCGAACGCTGGAAA CGGTGCGAACGGCATGAACGG CCGAT CCGGCCAAGCCGTGCGCGACG CCCTGTTCGACCGCG dnaB 163925 - 165382 + | replicative DNA helicase TERM 165 166313 - 166268 - g 86 -14.5 -3.34501 | gap 1, opp_overlap 166282 166298 ATACAACCTGTACAA CGCGGCCGCCGCGCTCGCCGTG GTG CGCGCCGT-CGCAGCGGACGCG CAGGCGATGTTCCTG TERM 166 166922 - 166912 - g 71 -8.2 -4.11216 | overlap 166913 CGGCCATGCTGAAAA CGCG TGC CGCG CTCGCCAAAATCGCC TERM 167 166957 - 166933 - g 76 -9.2 -4.07568 | overlap 166934 CCGCGCTCGCCAAAA TCGCCGACGT GGCCG ACGCCGGCGT GGGCAAGTGAGCGCC TERM 168 166956 - 166934 - g 72 -12.7 -3.04398 | overlap 166933 CGCGCTCGCCAAAAT CGCCGACGT GGCCG ACGCCGGCG TGGGCAAGTGAGCGC BAD_0117 165384 - 166967 + | hypothetical protein BAD_0118 167033 - 167791 + | cobyric acid synthase CobQ BAD_0119 167859 - 168179 + | hypothetical protein TERM 169 168195 - 168231 + F 86 -12.3 -3.83026 | gap 1 CTCCAGTCTTTCGTA TCGCCGTCTGCCGCGC ATGTGA GCGCC-CGGACGGCGA TTTGCTATGCCCGCG TERM 170 168243 - 168280 + F 76 -12.7 -2.7264 | gap 1, overlap 168235 168234 168242 168278 GCGATTTGCTATGCC CGCGCGACGCC-GGCGAA ACG TTCGTCTGGCATCGCGGG CTTTCCAGCCGATTT TERM 171 169075 - 169058 - g 75 -7.7 -4.2679 | gap 1, overlap 169059 169061 GAATCGCCACCAAAA CCATGCGC AGC GCGCA-GG TGGTGGACCTGTCCG BAD_0120 168694 - 170199 + | hypothetical protein BAD_0121 170413 - 171123 + | putative peptidoglycan bound protein TERM 172 171694 - 171682 - g 70 -4.8 -4.56597 | opp_overlap 171670, overlap 171684 171685 CGTCGGCGGCAAAAA CACG CACGC CGTG CTCTCCGCACACCGC TERM 173 171996 - 171968 - g 71 -8.7 -3.75153 | opp_overlap 171970 171975, overlap 171970 GCGGCGCAAGCCAAA CACGAGGCTGCGG ATT CCGCGGTCTCGTC ATTCACCGTCTACGG TERM 174 171994 - 171970 - g 74 -11.3 -3.46068 | opp_overlap 171970 171975, overlap 171968 GGCGCAAGCCAAACA CGAGGCTGCGG ATT CCGCGGTCTCG TCATTCACCGTCTAC TERM 175 171970 - 171994 + G 79 -15.7 -2.72991 | opp_overlap 171970 171968, overlap 171975 GGCGCAAGCCAAACA CGAGGCTGCGG ATT CCGCGGTCTCG TCATTCACCGTCTAC BAD_0122 171257 - 172141 + | sortase TERM 176 172181 - 172147 - f 78 -7.1 -4.63486 | opp_overlap 172146 AGTCCGCTAATAAAA GGCGATTAGCCAGTC TTACC GGCTCGGTAATCGCC CTTCCGTATTTTGTC BAD_0123 172645 - 173715 + | phosphodiesterase TERM 177 173802 - 173842 + T 100 -18.4 -5.13741 | overlap 173839 CCGGTTTTATATGGT TTCGGCCTGCCATCGCAT GATTG GTGCGGTAGCAGGCCGAA TTTTTATTCGATTGA upp 174517 - 173876 - | uracil phosphoribosyltransferase TERM 178 174694 - 174665 - R 73 -5.5 -4.60713 | overlap 174681 CAAAAGAGGAGAAAA GCGCCGAACCACG AAAG CGCCTGTCGGCGC AAAGGCCGCTCGCAG TERM 179 174694 - 174681 - R 76 -9.5 -3.84246 | overlap 174665 CGCCGAACCACGAAA GCGCC TGTC GGCGC AAAGGCCGCTCGCAG BAD_0125 175648 - 174872 - | hypothetical protein mutT1 176738 - 175650 - | MutT1 protein TERM 180 176831 - 176801 - R 100 -19 -4.68124 | opp_overlap 176830 CGAACATACAGAAAA TGGCCGGGCCCGCA AGG TGCGGAACCGGCCA TTCGCCTCGATCGAT TERM 181 176830 - 176872 + r 77 -7.6 -4.25056 | opp_overlap 176801, overlap 176834 AGGTGCGGAACCGGC CATTCGCCTCGATCGATCAG TGC CTTACCGGTCGACGCGTGTG TTTCTTGATGAGGTA ppk 179080 - 176846 - | polyphosphate kinase TERM 182 179490 - 179515 + H 100 -16.9 -5.46657 | opp_overlap 179494 CCGAAGATTCTTGCA GGAAGGCCCGC TTCG GCGGGTCTTCC TTTTTTGTTGCGCTG TERM 183 179803 - 179781 - H 70 -6.9 -4.07568 | CGTGTTCGCCGAAAA TCCGGTCGC AGCCA GCGGCCAGA GTGCGGCAGCCGACT TERM 184 179832 - 179863 + H 85 -13.1 -3.48276 | gap 1, opp_overlap 179832 CTCGATCCCAGCAAA CCGTT-CGGCGGGA AACGG TCTCGCCGCAACGG TTCTATACGCCGCAG TERM 185 179863 - 179832 - H 76 -10.9 -3.74693 | gap 1, opp_overlap 179832 CTCGATCCCAGCAAA CCGTT-CGGCGGGA AACGG TCTCGCCGCAACGG TTCTATACGCCGCAG BAD_0128 179939 - 180763 + | hypothetical protein BAD_0129 180744 - 181736 + | hypothetical protein BAD_0130 181736 - 182506 + | hypothetical protein BAD_0131 182503 - 183018 + | hypothetical protein BAD_0132 183285 - 183572 + | hypothetical protein BAD_0133 183575 - 183940 + | hypothetical protein BAD_0134 183993 - 184412 + | hypothetical protein BAD_0135 184435 - 185625 + | hypothetical protein BAD_0136 186367 - 185729 - | TetR-type transcriptional regulator TERM 186 186459 - 186471 + H 73 -10.5 -3.35679 | opp_overlap 186459 CTGATTTCCAGAGTA CCGGC TGC GCCGG TTGTAGATCAGACAG dnaX 186591 - 189035 + | DNA polymerase III subunits gamma and tau recR 189152 - 189754 + | recombination protein recR TERM 187 189793 - 189806 + F 70 -3.1 -4.82667 | TTGGGCGCGTCCGGA CTTGA CAAA TCAGG TTTTTCCTATAATGA askA 189874 - 190635 + | aspartokinase askB 190752 - 191294 + | aspartokinase TERM 188 191328 - 191351 + T 95 -11 -4.65819 | opp_overlap 191328 CCCAGTATTTTTAAA GGGCATGGTT TTGC GACCGTGCCC TTTTCGTTTGCTTTT TERM 189 191452 - 191413 - T 100 -23.8 -3.56568 | opp_overlap 191416 191422, overlap 191416 191422 CAAGCAGTCCCCAAA CAAGCAAAAGGCCGGCTC CGAA GAGTCGGCCTTTTGCTTG GCTATGGCTCGTTTA TERM 190 191416 - 191449 + T 100 -21.9 -3.13728 | opp_overlap 191413 191416 191422, overlap 191422 GCAGTCCCCAAACAA GCAAAAGGCCGGCTC CGAA GAGTCGGCCTTTTGC TTGGCTATGGCTCGT TERM 191 191449 - 191416 - T 100 -19.7 -3.91716 | opp_overlap 191416 191422, overlap 191413 191422 GCAGTCCCCAAACAA GCAAAAGGCCGGCTC CGAA GAGTCGGCCTTTTGC TTGGCTATGGCTCGT TERM 192 191443 - 191422 - T 95 -11.5 -4.62203 | opp_overlap 191422 191416, overlap 191416 191413 CCCAAACAAGCAAAA GGCCGGCTC CGAA GAGTCGGCC TTTTGCTTGGCTATG TERM 193 191422 - 191443 + T 100 -13.7 -4.44548 | opp_overlap 191416 191413 191422, overlap 191416 CCCAAACAAGCAAAA GGCCGGCTC CGAA GAGTCGGCC TTTTGCTTGGCTATG asd 192604 - 191510 - | aspartate-semialdehyde dehydrogenase BAD_0142 192793 - 193434 + | hypothetical protein TERM 194 194448 - 194428 - g 75 -8.2 -4.25104 | overlap 194429 GCGTGGCTACGAAAA GCGACGGC GGCCT GCCGTCGG ACATCGTCGGCCAGG pknB 193503 - 196046 + | serine_threonine protein kinase BAD_0144 197646 - 196123 - | hypothetical protein TERM 195 197195 - 197164 - G 70 -5.1 -4.56597 | gap 1, opp_overlap 197164 197166 197174, overlap 197166 CGCCGGCCCCAAAAA CGCGGC-GAACGTG TCGCG CACTTTCTGCCGTG TCTCGTCGAGCAGCG BAD_0145 197848 - 199758 + | 2-isopropylmalate synthase TERM 196 199801 - 199843 + F 81 -12.2 -3.47078 | gap 3, opp_overlap 199804, overlap 199806 CAAACGCGCCGGATA TGATTCGAGGGGCTTCCCAGG GTAA CC-GGGAAGCCCCTCG--TCG TTGTCATGTGCCATG TERM 197 199842 - 199804 - f 89 -16.7 -2.62263 | opp_overlap 199801 199806 ACGCGCCGGATATGA TTCGAGGGGCTTCCCAG GGTAA CCGGGAAGCCCCTCGTC GTTGTCATGTGCCAT TERM 198 199806 - 199840 + F 100 -22.3 -2.88069 | gap 1, opp_overlap 199804, overlap 199801 GCGCCGGATATGATT CGAGGGGCTTCCCAGG GTAA CC-GGGAAGCCCCTCG TCGTTGTCATGTGCC BAD_0146 200017 - 201081 + | large protein with C-terminal homology to alpha-arabinofuranosidase II BAD_0147 201954 - 201172 - | hypothetical protein BAD_0148 203410 - 201947 - | putative transposase BAD_0149 203538 - 204662 + | large protein with C-terminal homology to alpha-arabinofuranosidase II BAD_0150 204672 - 205763 + | LacI-type transcriptional regulator TERM 199 205771 - 205786 + G 73 -9 -3.86346 | TCCTCTGAGCTTTCG CTTGCC TTCC GGCAAG TTTCTCCCAGCGTGC BAD_0151 205760 - 206044 + | hypothetical protein BAD_0152 206077 - 207138 + | exo-alpha-L-arabinofuranosidase II BAD_0153 207439 - 208719 + | solute binding protein of ABC transporter system TERM 200 208739 - 208781 + F 78 -6.9 -4.59773 | opp_overlap 208740, overlap 208740 ATTTAAGCTGAAGAG AGGGTGCGAGTATCAATTG ATTTG CAGCTGGGGCTCGCACCCC TTTTTGAAGCTGGGA TERM 201 208740 - 208780 + F 73 -10.4 -3.35542 | opp_overlap 208740, overlap 208739 TTTAAGCTGAAGAGA GGGTGCGAGTATCAATTG ATTTG CAGCTGGGGCTCGCACCC CTTTTTGAAGCTGGG BAD_0154 208807 - 209757 + | sugar permease of ABC transporter system BAD_0155 209757 - 210644 + | sugar permease of ABC transporter system TERM 202 210985 - 211004 + G 78 -2.9 -5.1101 | ATGCATTATGGAACA CCGTTAT GGCTTG ATAATGG TTTTTTAAATACTGA TERM 203 211123 - 211154 + G 70 -10.2 -3.45742 | opp_overlap 211121 211137, overlap 211122 TTGTTGAATATGATG TACTGCGGCCAATA TGGC TATTGGCCACCGTA TCTTGTTGGTGATGA BAD_0156 210652 - 211923 + | hypothetical protein TERM 204 211975 - 212016 + T 75 -11.7 -2.98015 | gap 1, opp_overlap 211957 211975 211981, overlap 211981 CGTGCTTAAACACGA TGAAAAGATGCCGCAG-GAG TTC TTCGCAGCGGCATCTTTCCA TATCTAGTAATTGAG TERM 205 212016 - 211975 - T 79 -13.2 -2.84325 | gap 1, opp_overlap 211975 211981, overlap 211957 211981 CGTGCTTAAACACGA TGAAAAGATGCCGCAG-GA GTTCT TCGCAGCGGCATCTTTCCA TATCTAGTAATTGAG TERM 206 211981 - 212010 + T 70 -9.3 -3.74792 | gap 1, opp_overlap 211975 211981, overlap 211975 TAAACACGATGAAAA GATGCCGCAG-GAG TTC TTCGCAGCGGCATC TTTCCATATCTAGTA TERM 207 212010 - 211981 - T 81 -8.6 -4.37067 | gap 1, opp_overlap 211981 211975, overlap 211975 TAAACACGATGAAAA GATGCCGCAG-GA GTTCT TCGCAGCGGCATC TTTCCATATCTAGTA TERM 208 212330 - 212373 + T 100 -21.9 -3.72576 | gap 1, opp_overlap 212332 212333, overlap 212332 212332 GTGTGCACGCGGCAA AAC-CAAGGGGGCTTCCCGG AATAA CCGGGAAGCCCCCTTGCGTA TTTGCTGACCGCGAC TERM 209 212332 - 212370 + T 100 -24.7 -2.66695 | opp_overlap 212332 212333, overlap 212330 212332 GTGCACGCGGCAAAA CCAAGGGGGCTTCCCGG AATAA CCGGGAAGCCCCCTTGC GTATTTGCTGACCGC TERM 210 212332 - 212371 + T 100 -24.5 -3.44848 | gap 1, opp_overlap 212332 212333, overlap 212332 212330 GTGCACGCGGCAAAA C-CAAGGGGGCTTCCCGG AATAA CCGGGAAGCCCCCTTGCG TATTTGCTGACCGCG TERM 211 212370 - 212332 - T 100 -24.7 -4.09685 | opp_overlap 212332 212332 212330, overlap 212333 GTGCACGCGGCAAAA CCAAGGGGGCTTCCCGG AATAA CCGGGAAGCCCCCTTGC GTATTTGCTGACCGC TERM 212 212369 - 212333 - T 100 -28.2 -3.05597 | opp_overlap 212332 212332 212330, overlap 212332 TGCACGCGGCAAAAC CAAGGGGGCTTCCCGG AATAA CCGGGAAGCCCCCTTG CGTATTTGCTGACCG BAD_0157 214725 - 212410 - | penicillin-binding protein TERM 213 214528 - 214542 + g 78 -6.4 -4.62069 | GAGCACCCATTTGAG CACGAG ATG CTTGTG TTTTCTGGTCTTTTT TERM 214 214658 - 214676 + g 73 -4.5 -4.59773 | gap 1, overlap 214636 GGCGTCGTGGACGTT GCGC-TGC CGCT GCGGGCGC TTTTTGAGCGTGAGC TERM 215 214827 - 214843 + H 74 -4.3 -4.7329 | opp_overlap 214810, overlap 214829 ACAATCTGTTGACGA CTGCCGT AAT ATGGCCG TTTTTCAGTGATTTT BAD_0158 214937 - 216079 + | myo-inositol-1-phosphate synthase TERM 216 216174 - 216215 + T 78 -11.8 -3.28712 | opp_overlap 216175 216180, overlap 216180 AGAATCAGCATATAA TGAAAATCCCTATGGCCT GGGGTA ATGCCATAGGGATTTTTG TTGTCCCGGAAACGC TERM 217 216209 - 216180 - T 95 -10.8 -4.53636 | opp_overlap 216174 216180, overlap 216175 AGCATATAATGAAAA TCCCTATGGCCT GGGGTA ATGCCATAGGGA TTTTTGTTGTCCCGG TERM 218 216180 - 216209 + T 100 -10.8 -5.18726 | opp_overlap 216180 216175, overlap 216174 AGCATATAATGAAAA TCCCTATGGCCT GGGGTA ATGCCATAGGGA TTTTTGTTGTCCCGG TERM 219 216269 - 216228 - T 81 -12.1 -3.53012 | gap 1 TTGTTGTCCCGGAAA CGCTGCGGCGGTG-GCGGCC AAT GGTCGTGCGCCGTCGCAGCG TGAACGGGAATCATA gif 217484 - 216306 - | UDP-galactopyranose mutase BAD_0160 217768 - 218859 + | pre-pilin peptidase TERM 220 220250 - 220282 + G 76 -13.3 -3.02511 | CCGCCACCGTGCGTC TGTCCTCGCCGACCG AAG CCGACGGCGAGGCCA TGTTCCAGGCGTCCG topA 218965 - 222048 + | DNA topoisomerase I BAD_0162 222170 - 222823 + | thymidylate kinase TERM 221 223265 - 223222 - g 72 -10.9 -3.33399 | overlap 223217 223224 CTGAAGGAAATCGAA GAGCCGAGCCCGCACACCA TCTGGC TGCTGTGCGCGCCCAGCGC CCAAGACGTGCTGCC TERM 222 223263 - 223224 - g 74 -12.1 -3.22878 | overlap 223222 223217 GAAGGAAATCGAAGA GCCGAGCCCGCACACCA TCTGGC TGCTGTGCGCGCCCAGC GCCCAAGACGTGCTG BAD_0163 222820 - 223968 + | DNA polymerase III subunit delta' rbsR 225066 - 224011 - | LacI family transcriptional regulator TERM 223 225252 - 225223 - R 100 -16.4 -3.85505 | opp_overlap 225220 225219 TTATTAAGAATAGAA CGACCGCCCGTC GAATAT GGCGGGCGGTCG AAACGTTCGTACGTC BAD_0165 225612 - 225274 - | hypothetical protein TERM 224 225620 - 225633 + H 76 -5.3 -4.71061 | CTCGATATTTACACG TCGAT GTAT ATCGA TTTTTGCATATCGAT ptsI 225852 - 227546 + | PTS system, enzyme I TERM 225 227672 - 227709 + F 95 -14.2 -3.75897 | gap 1, opp_overlap 227675, overlap 227673 CCCTGTTTCCCGGAA TGACCCCGTTTCGTGCG ATCGC CGCGCG-GACGGGGTCG TTTCGGTTGCGGGTT TERM 226 227673 - 227708 + F 86 -15.5 -2.85056 | gap 1, opp_overlap 227675, overlap 227672 CCTGTTTCCCGGAAT GACCCCGTTTCGTGCG ATCGC CGCGCG-GACGGGGTC GTTTCGGTTGCGGGT BAD_0167 227684 - 228373 + | hypothetical protein pepD 228482 - 230074 + | dipeptidase TERM 227 230201 - 230223 + F 74 -4.7 -4.70583 | overlap 230196 CGTATGACGGCCGGA CGGCGTCCG CTGTA TGGGAGCCG TTTTCTATTGCTGAC fhs 230264 - 231847 + | formate-tetrahydrofolate ligase TERM 228 231930 - 231956 + T 100 -15.1 -5.1675 | opp_overlap 231930 CGGCGTAAATACAAA GCCGCTGGTCC CGTTC GGGCCGGCGGC TTTTTTCGTGGGTGA TERM 229 231956 - 231930 - T 91 -11.5 -4.32857 | gap 1, opp_overlap 231930 CGGCGTAAATACAAA GCCGCTGGTCCC GTTC GGG-CCGGCGGC TTTTTTCGTGGGTGA TERM 230 231994 - 232023 + T 77 -7.7 -4.25848 | overlap 232016 232017 ACGTTGTCCGTTTGT GGGTGCGGGCGTG CTTG CATGTGCGCCCCC TTTTGCTCACGAGTT TERM 231 232016 - 232052 + T 77 -3.6 -5.12474 | overlap 231994 232017 GGCGTGCTTGCATGT GCGCCCCCTTTTGC TCACGAGTT GCGGAATGGGGCGA TTTTTCTCTCTTATG BAD_0170 232648 - 232301 - | hypothetical protein TERM 232 233206 - 233190 - g 70 -3.5 -4.61824 | overlap 233192 GAAGAAGAAGGAAAA CCGCCTG AGC CCGGAGG AGCTGGAGGCCAAGT BAD_0171 232732 - 233292 + | hypothetical protein TERM 233 233324 - 233364 + T 100 -22.7 -3.92522 | opp_overlap 233324, overlap 233330 233361 TACGGCATACGAAAA GGCGCGTCCGAATCGGATT TTT ATTGCGATTCGGACGCGCC TTTCTGCGGTTGGCG TERM 234 233364 - 233324 - T 100 -22.7 -4.35116 | opp_overlap 233324 233330 233361 TACGGCATACGAAAA GGCGCGTCCGAATCGGATT TTT ATTGCGATTCGGACGCGCC TTTCTGCGGTTGGCG TERM 235 233330 - 233340 + T 86 -6.8 -5.10208 | opp_overlap 233324, overlap 233324 ATACGAAAAGGCGCG TCCG AAT CGGA TTTTTATTGCGATTC BAD_0172 234839 - 233415 - | hypothetical protein TERM 236 235121 - 235134 + H 74 -2.4 -5.00616 | opp_overlap 235121 GGGCAGGAACCAATA TTCG AATCGA CGAA TTTTTTCACAGGGCC TERM 237 235180 - 235164 - H 81 -12.3 -3.55444 | CGGCGACCGGCGAAA CGTGCTG AGC CAGCACG TGGCCGGCAGGTCCG TERM 238 235267 - 235297 + G 90 -14.7 -3.59262 | opp_overlap 235266 235265 235257 GCAAAGTGGAGAACC CCGGGCACCTGCT GTACG AGCGGCTGCCCGG TTTCCACCTGTCCGA BAD_0173 235218 - 235877 + | hypothetical protein BAD_0174 235961 - 237022 + | hypothetical protein TERM 239 237224 - 237177 - T 100 -31 -3.64162 | opp_overlap 237177 237184, overlap 237184 ACGAATGATCTGAAA CGAATAATCCCGGTATCCTGCG ATTG CACAGGATACCGGGATTATTCG TTATTCGTTATGGTG TERM 240 237177 - 237224 + T 100 -28.8 -3.86981 | opp_overlap 237177 237184, overlap 237184 ACGAATGATCTGAAA CGAATAATCCCGGTATCCTGCG ATTG CACAGGATACCGGGATTATTCG TTATTCGTTATGGTG TERM 241 237217 - 237184 - T 100 -21.9 -3.89756 | opp_overlap 237177 237184, overlap 237177 ATCTGAAACGAATAA TCCCGGTATCCTGCG ATTG CACAGGATACCGGGA TTATTCGTTATTCGT TERM 242 237184 - 237217 + T 100 -19.7 -3.90559 | opp_overlap 237184 237177, overlap 237177 ATCTGAAACGAATAA TCCCGGTATCCTGCG ATTG CACAGGATACCGGGA TTATTCGTTATTCGT BAD_0175 238598 - 237282 - | hypothetical protein gltX 238766 - 240286 + | glutamyl-tRNA synthetase TERM 243 240318 - 240351 + F 100 -16.1 -3.85817 | opp_overlap 240324, overlap 240319 240324 CTGTTAGCTGAATGA TGGAAACCCGCCGGA GTGA TTCGGCGGGTTTTCG TTTATGCGGAAGGCT TERM 244 240319 - 240350 + F 93 -17.4 -2.91276 | opp_overlap 240324, overlap 240318 240324 TGTTAGCTGAATGAT GGAAACCCGCCGGA GTGA TTCGGCGGGTTTTC GTTTATGCGGAAGGC TERM 245 240345 - 240324 - f 79 -11.5 -3.71527 | opp_overlap 240324 240319 240318 GCTGAATGATGGAAA CCCGCCGGA GTGA TTCGGCGGG TTTTCGTTTATGCGG TERM 246 240324 - 240345 + F 100 -13.7 -4.61873 | opp_overlap 240324, overlap 240319 240318 GCTGAATGATGGAAA CCCGCCGGA GTGA TTCGGCGGG TTTTCGTTTATGCGG TERM 247 240676 - 240693 + F 100 -12.7 -5.93252 | opp_overlap 240675 240672 ATCCCAGCCAATGAG CCCTCGC AGAT GCGAGGG TTTTTTGTTTTTCGC BAD_0177 240838 - 242301 + | hypothetical protein TERM 248 242346 - 242374 + T 100 -18.3 -4.74504 | opp_overlap 242346 AATGAATACAAAAAA GCTGACGATGGGA ACT TTCCATCGTCAGC TTTTTACGTTAACGT TERM 249 242374 - 242346 - T 100 -16.1 -5.50925 | opp_overlap 242346 AATGAATACAAAAAA GCTGACGATGGGA ACT TTCCATCGTCAGC TTTTTACGTTAACGT BAD_0178 243235 - 242411 - | IclR-type transcriptional regulator leuC 243552 - 244955 + | isopropylmalate isomerase large subunit leuD 245045 - 245734 + | isopropylmalate isomerase small subunit TERM 250 245914 - 245933 + F 100 -12.1 -5.33026 | TCTAACTTTTCCCAA GCCCGGC ACCCAA GCCGGGC TTTTTGTTTACCTTC BAD_0181 246136 - 247749 + | hypothetical protein TERM 251 248662 - 248648 - g 70 -10 -3.53091 | ATCTGGTGGGGGAAA TCACGG AAG CCGTGA AAAACGAAATCGGCG BAD_0182 247942 - 249084 + | hypothetical protein murA 249180 - 250505 + | UDP-N-acetylglucosamine 1-carboxyvinyltransferase TERM 252 250629 - 250655 + F 100 -13.7 -5.18371 | CCCATGTTGCTTTCA CCGGTACTCGC CTTAC GCGGGTGCCGG TTTTGTTTTATCCGC TERM 253 251439 - 251429 - g 72 -2.4 -4.78107 | overlap 251430 251431 GATGAGCATGAAAAA CGGC GTG GGCG TGATCGCCCTCGAAT BAD_0184 250836 - 251756 + | hypothetical protein BAD_0185 251928 - 252926 + | glycerol-3-phosphate dehydrogenase ddlA 253001 - 254137 + | D-alanine-D-alanine ligase TERM 254 254601 - 254572 - g 84 -11.5 -4.07568 | gap 1 GGCCGCTGCCGAAAA GGAAGGCGCGCTCA ACG TGATCGCGC-TTCC GCACGACTGGTCCAA BAD_0187 254369 - 255535 + | ABC transporter solute-binding protein BAD_0188 255537 - 256451 + | ABC transporter permease BAD_0189 256499 - 257356 + | ABC transporter permease msiK 257353 - 258540 + | ABC transporter ATP-binding protein TERM 255 258687 - 258699 + F 100 -5.5 -5.72053 | AACTGGTAGTACAGT GCTGG ATA TCAGC TTTTTTATTTGCTTG BAD_0191 258736 - 259854 + | hypothetical protein TERM 256 259877 - 259906 + T 100 -19.3 -4.21607 | opp_overlap 259877 CGCGCGGATTATGAA GGCCGGCCGGGGA TACG TTCCCGGTCGGCC TTTCTGTTGCCTGCA TERM 257 259906 - 259877 - T 95 -14.9 -3.21099 | opp_overlap 259877 CGCGCGGATTATGAA GGCCGGCCGGGGA TACG TTCCCGGTCGGCC TTTCTGTTGCCTGCA BAD_0192 260748 - 259963 - | hypothetical protein TERM 258 260679 - 260707 + g 70 -4.5 -4.56597 | opp_overlap 260661, overlap 260682 CGGCGACGATGAGCA CGACGGCGAGC AGGATGA GCTTGCTGTAG TTTTTGGCAAGCCAG BAD_0193 260880 - 262085 + | hypothetical protein TERM 259 262778 - 262789 + G 78 -7.2 -4.59853 | CTACCATGCCATCGC CGCG AATC CGCG TTTTTCCGACATTGA BAD_0194 262422 - 263630 + | hypothetical protein BAD_0195 263786 - 264463 + | hypothetical protein TERM 260 264759 - 264749 - g 70 -4.6 -4.45083 | overlap 264751 TCGACATGTATAAAA CGGC CGA ACCG GTGGCGTTGCACGGC BAD_0196 264568 - 265758 + | aspartate aminotransferase TERM 261 265861 - 265891 + T 76 -5.4 -4.8048 | ATGCGGGGAAAAGCC GGTTGGAGGGTA TGGATAT TGCCCCCTAACC TTTTTGCTGTAGGAC TERM 262 265984 - 266028 + T 100 -23.1 -3.28712 | gap 1, opp_overlap 265986, overlap 265988 CCGTGTGCGTTGATA CAGG-TTCGCCCGGAGCTGG TGGGGT CCAGCTCCGGGCGAAGTCTG TTATGGGGAAGGAAG TERM 263 266025 - 265986 - T 95 -17.9 -2.87132 | opp_overlap 265984 265988 GTGTGCGTTGATACA GGTTCGCCCGGAGCTGG TGGGGT CCAGCTCCGGGCGAAGT CTGTTATGGGGAAGG TERM 264 265988 - 266023 + T 100 -24.9 -2.50074 | opp_overlap 265986, overlap 265984 GTGCGTTGATACAGG TTCGCCCGGAGCTGG TGGGGT CCAGCTCCGGGCGAA GTCTGTTATGGGGAA BAD_0197 266966 - 266073 - | 6-phosphogluconate dehydrogenase-like protein BAD_0198 268481 - 267153 - | gluconate permease BAD_0199 269100 - 268564 - | putative gluconokinase TERM 265 269424 - 269388 - g 76 -5.8 -4.58773 | gap 1, overlap 269390 GGCAGGAAACGAAAA CG-GCGGCGAACTGC TGCAGGAT GCAGTGTGCCGCACG CTGGCCATCGAAATG BAD_0200 269371 - 270090 + | putative transcription factor BAD_0201 270925 - 270134 - | hypothetical protein TERM 266 270215 - 270239 + g 70 -4.2 -4.57569 | opp_overlap 270186 270222 270227 CGCCTGATCGGCGTA CATCGAATCG AACAG CGTATCGATG TTTTTGCGGAAATCC BAD_0202 272404 - 271142 - | hypothetical protein rpmB 272820 - 273014 + | 50S ribosomal protein L28 TERM 267 273037 - 273063 + F 83 -7.9 -4.65153 | gap 1, opp_overlap 273037, overlap 273032 AATAACAGCTTGAAA CCCCGGTAAGCC GAAT GGCC-GCCGGGG TTTTGCTTTATCTGA TERM 268 273358 - 273384 + G 77 -11.5 -3.60098 | opp_overlap 273348, overlap 273360 GAGAACATGGCCTTC GCCGCGCACGT GCGTG GCGTGCGCGTC TTTCCGATGGCCCGT TERM 269 273360 - 273382 + G 76 -12.7 -3.38046 | opp_overlap 273348, overlap 273358 GAACATGGCCTTCGC CGCGCACGT GCGTG GCGTGCGCG TCTTTCCGATGGCCC TERM 270 273903 - 273850 - g 89 -10.1 -4.66609 | opp_overlap 273850, overlap 273879 GAGTCGATCGAAAAA TGCATGGACCGGCTGTGCGGTGACG AATA CGCTGCGGCACAGGCAGCCCGTGCA TTGCATGGCGCCGAT recG 273157 - 275838 + | ATP-dependent DNA helicase BAD_0205 275844 - 276473 + | hypothetical protein TERM 271 276530 - 276497 - T 100 -16 -4.8622 | CTTTCCAACTAAAAA CGTCGACGGTGGAC CTGCAT GCCCTCCGTCGACG TGAACAATCGTGCGT trmD 277468 - 276548 - | tRNA (guanine-N(1)-)-methyltransferase TERM 272 277544 - 277515 - R 100 -17.9 -3.14132 | opp_overlap 277518, overlap 277518 CGCGGCGCGTACGAA CAAGGCGCCGGCA TAAT CGCCAGCGCCTTG TTGAAAAAGCAGCGG TERM 273 277541 - 277518 - R 89 -13.8 -3.71848 | opp_overlap 277518, overlap 277515 GGCGCGTACGAACAA GGCGCCGGCA TAAT CGCCAGCGCC TTGTTGAAAAAGCAG TERM 274 277518 - 277541 + r 74 -10.9 -3.61398 | opp_overlap 277518 277515 GGCGCGTACGAACAA GGCGCCGGC ATAATC GCCAGCGCC TTGTTGAAAAAGCAG BAD_0207 278148 - 277561 - | 16S rRNA-processing protein rimM TERM 275 278136 - 278107 - G 81 -16.5 -2.8547 | overlap 278109 ACGCCCGATACGACA GACCCTCAGCAGC TCAA GCTGTTGAGGGTC GTCGGAATGCATATC TERM 276 278134 - 278109 - G 75 -13.3 -2.97747 | overlap 278107 GCCCGATACGACAGA CCCTCAGCAGC TCAA GCTGTTGAGGG TCGTCGGAATGCATA BAD_0208 278403 - 278170 - | hypothetical protein rpsP 278855 - 278406 - | 30S ribosomal protein S16 TERM 277 278880 - 278924 + H 72 -11.5 -3.14602 | opp_overlap 278923, overlap 278861 278878 CCTTGTAACTAGGGG TGTGTGTTTCGTGTTCTGTGT GGG GCACGGAATCCGAAACCCACG TGTTCCTCACGTCAC TERM 278 279015 - 279059 + H 70 -7 -4.1585 | gap 1, overlap 279019 279043 279056 ACGCGTTCCCGTATG CGT-TCCCGAGCGTCCGTTTC TGTT GACTCGGACGCTCGGCTTGCG TTTTGCGCATTCTGA TERM 279 279019 - 279054 + H 88 -13.2 -3.37091 | overlap 279015 279043 GTTCCCGTATGCGTT CCCGAGCGTCCGTTTC TGTT GACTCGGACGCTCGGC TTGCGTTTTGCGCAT BAD_0210 279222 - 280256 + | hypothetical protein TERM 280 280275 - 280324 + T 100 -29.7 -2.91735 | opp_overlap 280268 280278 280283, overlap 280278 280283 GAAAATAAGCTGGCA TAACGAAACTGCCGACGCTGGAA AACG TTCCAACGTCGGCAGTTTCGTTA TATATGCCGTATTGC TERM 281 280321 - 280278 - T 100 -29.2 -3.32066 | opp_overlap 280275 280278 280283, overlap 280268 280283 AATAAGCTGGCATAA CGAAACTGCCGACGCTGGAA AACG TTCCAACGTCGGCAGTTTCG TTATATATGCCGTAT TERM 282 280278 - 280321 + T 100 -27 -3.59966 | opp_overlap 280278 280268 280283, overlap 280275 280283 AATAAGCTGGCATAA CGAAACTGCCGACGCTGGAA AACG TTCCAACGTCGGCAGTTTCG TTATATATGCCGTAT TERM 283 280316 - 280283 - T 100 -21.9 -3.9941 | opp_overlap 280278 280275 280283, overlap 280278 280268 GCTGGCATAACGAAA CTGCCGACGCTGGAA AACG TTCCAACGTCGGCAG TTTCGTTATATATGC TERM 284 280283 - 280316 + T 100 -19.7 -4.06361 | opp_overlap 280283 280278 280268, overlap 280278 280275 GCTGGCATAACGAAA CTGCCGACGCTGGAA AACG TTCCAACGTCGGCAG TTTCGTTATATATGC ffh 282049 - 280400 - | signal recognition particle protein TERM 285 280811 - 280774 - G 74 -11.1 -3.55444 | CGTTGACCTGCGAAA CCGTCACGCCGGAACCG TAGG CGATGCGGGCGCGGCGG GAACCGTCGATGATC TERM 286 280940 - 280952 + g 70 -3.3 -4.72272 | GGCCATGCCCGGAAT CATGC CAA GCAGG TTTTTCATCGGGCCG cysS 283736 - 282105 - | cysteinyl-tRNA synthetase BAD_0213 283872 - 284600 + | amidotransferase BAD_0214 284912 - 287068 + | ATP binding protein of ABC transporter TERM 287 287136 - 287163 + F 100 -17.8 -3.54919 | gap 1, opp_overlap 287136, overlap 287099 ACGGAATGTGCAAAA CCGACGCTG-GCG ATT CGCTCAGCGTCGG TTTACCGGAATAATT TERM 288 287163 - 287136 - f 100 -17.8 -4.1466 | gap 1, opp_overlap 287099 287136 ACGGAATGTGCAAAA CCGACGCTG-GCG ATT CGCTCAGCGTCGG TTTACCGGAATAATT BAD_0215 287356 - 287994 + | hypothetical protein BAD_0216 289137 - 288010 - | hypothetical protein BAD_0217 289769 - 289140 - | response regulator TERM 289 289385 - 289417 + g 78 -6.4 -4.67048 | CATTTCCAGTGGCTT TTCCGATGATTCGA ACCAG TTGAATCGTGGGAA TTTCTTTTGGAATAA BAD_0218 289936 - 290547 + | transcription regulator ArsR TERM 290 290882 - 290901 + G 72 -13.6 -2.52464 | opp_overlap 290868, overlap 290885 ACGGCTTATCGTGGC GAACGCCG TCGT CGGCGTTC TGGCTTGGGGCGCAA BAD_0219 290625 - 291896 + | hypothetical protein TERM 291 291910 - 291943 + T 100 -25.4 -3.96327 | opp_overlap 291910 GAATCGAAATAAAAA GCGCCGCCCCACGA AACGAA TCGTGGGGCGGCGC TTTGTCGTAGGCAAT TERM 292 291943 - 291910 - T 100 -25.4 -5.33026 | opp_overlap 291910 GAATCGAAATAAAAA GCGCCGCCCCACGA AACGAA TCGTGGGGCGGCGC TTTGTCGTAGGCAAT ilvH 292527 - 291973 - | acetolactate synthase 3 regulatory subunit ilvB1 294422 - 292560 - | acetolactate synthase 1 catalytic subunit TERM 293 294610 - 294626 + r 89 -13.7 -3.46602 | opp_overlap 294599, overlap 294598 GAAAGGCCCATATTC TGGCGCG TTA CGCGCCA TTGTGATATGGACCA TERM 294 294633 - 294643 + r 77 -4 -5.09426 | opp_overlap 294599, overlap 294598 TACGCGCCATTGTGA TATG GAC CATA TTTTTTGCGATTGCG rncS 295512 - 294724 - | ribonuclease III BAD_0223 295640 - 295509 - | putative serine-threonine protein kinase TERM 295 295696 - 295714 + r 71 -5.9 -4.25104 | opp_overlap 295697, overlap 295697 TGCGCACATGGCAAG ACGCCAG CTGAT CTGGCGG TTTTGCTACGCAAGC TERM 296 295834 - 295803 - R 100 -19.6 -4.95547 | opp_overlap 295798 295807, overlap 295807 TTGATAATAATAAAA GAAACCCTGCCACC CGTC GATGGCAGGGTTTC GATGCTTTATACCGT TERM 297 295807 - 295830 + r 83 -12.4 -3.75295 | opp_overlap 295803 295807, overlap 295798 TAATAATAAAAGAAA CCCTGCCACC CGTC GATGGCAGGG TTTCGATGCTTTATA TERM 298 295830 - 295807 - R 100 -14.6 -4.96427 | opp_overlap 295807 295798, overlap 295803 TAATAATAAAAGAAA CCCTGCCACC CGTC GATGGCAGGG TTTCGATGCTTTATA rpmF 296058 - 295864 - | 50S ribosomal protein L32 BAD_0225 296768 - 296154 - | hypothetical protein BAD_0226 297654 - 296824 - | hypothetical protein TERM 299 297582 - 297551 - G 80 -14.3 -3.04144 | overlap 297569 297570 GCGGTACCGGCAACA GCGCCGGTGGCCG GATAAT CGGCCGCCGGCGT GACCGGCTGCTGCGA TERM 300 298267 - 298280 + H 71 -9.5 -3.49102 | ATGGAAGGCAGTGGG GCCGC GATC GCGGC TTGTGTGAGGAGTCT BAD_0227 298301 - 298618 + | hypothetical protein TERM 301 298753 - 298725 - T 100 -26.1 -4.66609 | opp_overlap 298725 TATGTTATGCAAAAA CCGACGCCCGGTG AAT CACCGGGCGTCGG TTTTTGTTATGTCGT TERM 302 298725 - 298753 + T 100 -26.1 -5.25699 | opp_overlap 298725 TATGTTATGCAAAAA CCGACGCCCGGTG AAT CACCGGGCGTCGG TTTTTGTTATGTCGT BAD_0228 300202 - 298805 - | nicotinate phosphoribosyltransferase BAD_0229 300995 - 300207 - | hypothetical protein TERM 303 302115 - 302149 + H 100 -20.2 -4.26188 | CAAGTGGCTCCACTG CCCTAGATGTTCGGAG GTT TTCCGAGCATCTAGGG TTTTGCATATGTGCA BAD_0230 302286 - 303293 + | hypothetical protein TERM 304 303488 - 303453 - f 80 -8.9 -4.18018 | opp_overlap 303452, overlap 303454 TGTCGCCACTGAAAA GTGGTCGGAACCGCG GTATAT CGCGCTTCCGACCGA ATGTGTTAACTCGGG TERM 305 303487 - 303454 - f 76 -12.4 -3.10597 | opp_overlap 303452, overlap 303453 GTCGCCACTGAAAAG TGGTCGGAACCGCG GTATAT CGCGCTTCCGACCG AATGTGTTAACTCGG TERM 306 303571 - 303560 - f 83 -7.2 -4.65916 | GTGAGGTGAAGAAAA CGGC TCGT GCCG TGGAAAATCGAACGA pgi 303566 - 305335 + | glucose-6-phosphate isomerase TERM 307 305466 - 305494 + F 100 -18.3 -5.00339 | AGCGCGTACGTGGCA TACCCCATCCGTG TCT TACGGATGGGGTA TTTTTGATTATTGCT TERM 308 305520 - 305541 + F 75 -3.7 -4.90778 | overlap 305515 TTGCTGTGCTGAAAG GTGGGAT GCCGCATA ATCCCGC TTTTCTTTGGGTCCA rplS 305697 - 306098 + | 50S ribosomal protein L19 TERM 309 306125 - 306155 + F 100 -15.5 -4.67943 | opp_overlap 306119 AAATAAAGCGTGGAA TCGGCTCTTCGGC AACCC GTCGAGGAGCCGA TTTTCTATATTGGGC BAD_0233 306165 - 306539 + | hypothetical protein rnhB 306786 - 307580 + | ribonuclease HII BAD_0235 307709 - 308434 + | ATP-binding protein of ABC transporter system BAD_0236 308431 - 309936 + | hypothetical protein BAD_0237 310928 - 309984 - | hypothetical protein TERM 310 310292 - 310246 - G 76 -13.2 -3.03007 | AACACCGCCGGAATA TTCGACTTGTCC-TGCAACGGC TTCGT GCCGT-GCAAGGACATGCCGAA CGCCATCAGAATCAT TERM 311 311240 - 311210 - g 75 -2.5 -5.00616 | gap 2, overlap 311212 GTGTTCCTGAAAAAA CAGCCGCATCTGACG GTG CG-CAGGCACGGC-G ACACATTGGTGGCAT dapE 311057 - 312262 + | dipeptidase TERM 312 312417 - 312466 + F 100 -8.1 -5.39721 | gap 3, opp_overlap 312420, overlap 312420 ACGCGAATCATTGGA AAACGGAGCGTG-TAGG--GGGAA TAAAT TTCCCGTCCTGTCACGCTCCGTTG TTTTTTGTGTCATAC TERM 313 312420 - 312463 + F 95 -9.8 -4.77122 | gap 3, opp_overlap 312420, overlap 312417 CGAATCATTGGAAAA CGGAGCGTG-TAGG--GGGAA TAAAT TTCCCGTCCTGTCACGCTCCG TTGTTTTTTGTGTCA TERM 314 312463 - 312420 - f 74 -7.6 -4.17023 | gap 3, opp_overlap 312420 312417 CGAATCATTGGAAAA CGGAGCGTG-TAGG--GGGAA TAAAT TTCCCGTCCTGTCACGCTCCG TTGTTTTTTGTGTCA TERM 315 312731 - 312749 + G 72 -11 -3.34902 | opp_overlap 312729, overlap 312729 CTACTACCAATGAGG GCCTCGAT CAG GTCGAGGC TGTTGTGTCATCCGA BAD_0239 312697 - 315510 + | ribonuclease G TERM 316 315546 - 315518 - f 100 -13.9 -4.71708 | opp_overlap 315541 AAGAATAAAGGAAAA TCCCGGTATGTCA ACT TGACACGCCGGGA GCAGACTTGCGGTTG rplU 315655 - 315963 + | 50S ribosomal protein L21 rpmA 316003 - 316254 + | 50S ribosomal protein L27 TERM 317 316280 - 316311 + F 100 -18.8 -3.32698 | opp_overlap 316284, overlap 316284 AATAACGCTTTTGAT GAAAGACCGCGCCC ATAT GGACGCGGTCTTTC TGTTATGTAAGGTAG TERM 318 316307 - 316284 - f 100 -16 -3.72695 | opp_overlap 316280 316284 ACGCTTTTGATGAAA GACCGCGCCC ATAT GGACGCGGTC TTTCTGTTATGTAAG TERM 319 316284 - 316307 + F 100 -13.8 -4.31164 | opp_overlap 316284, overlap 316280 ACGCTTTTGATGAAA GACCGCGCCC ATAT GGACGCGGTC TTTCTGTTATGTAAG TERM 320 317177 - 317149 - g 80 -14.6 -3.02144 | overlap 317164 CCAGGCGCTCGAACA CGAGCTCGCCGA ATACG CCGGCAAGCTCG AACTGCCGCTCGGCG obgE 316331 - 318022 + | GTPase ObgE TERM 321 318069 - 318037 - f 88 -13.3 -3.3903 | opp_overlap 318037, overlap 318025 GAACCATCCAACGAA GCCCGCTGATGTGCC GAT GGCATGTCGGCGGGC TTTTTCAATAGCCGG TERM 322 318037 - 318069 + F 100 -19.9 -4.65895 | opp_overlap 318037 318025 GAACCATCCAACGAA GCCCGCTGATGTGCC GAT GGCATGTCGGCGGGC TTTTTCAATAGCCGG TERM 323 318265 - 318307 + G 74 -11.2 -3.53811 | gap 1, overlap 318266 318295 318300 GCGTGCGATTGATGG GCGGCCGCG-TGGTGCTGG TCTCCT CCGGCGCGATCGCGGCCGG TTTCGGCACGCTCGG TERM 324 318266 - 318306 + G 77 -14.7 -2.72144 | gap 1, overlap 318265 318295 318300 CGTGCGATTGATGGG CGGCCGCG-TGGTGCTGG TCTCCT CCGGCGCGATCGCGGCCG GTTTCGGCACGCTCG proB 318105 - 319238 + | gamma-glutamyl kinase aspC 319362 - 320570 + | aspartate aminotransferase TERM 325 320629 - 320662 + F 100 -12.5 -5.95166 | gap 1 GACGATATTTTTAGC GATTCGCGCTTCGGTG ACA TGCCGG-GCGCGAATC TTTTTTTTCGTTGGA secE 320936 - 321163 + | preprotein translocase subunit SecE nusG 321188 - 322012 + | transcription antitermination protein nusG TERM 326 322139 - 322154 + F 100 -11.8 -4.66625 | opp_overlap 322124 CGTGATTCTTTTGAA CCCCGC TTCG GCGGGG TTTCTTTGTATGTAT TERM 327 322363 - 322347 - f 74 -7.3 -4.14627 | overlap 322350 GCTTCACAGAAAGAA GAACCAT ACA ATGGCTC CTAAGAAGAAAGTCT rplK 322357 - 322788 + | 50S ribosomal protein L11 rplA 322803 - 323495 + | 50S ribosomal protein L1 TERM 328 323553 - 323523 - T 90 -10.5 -4.29432 | gap 1, opp_overlap 323523 TAAACTTCACCAAAA GACCCGTAT-CTGC AATC GCAGCATGCGGGTC TTTTCATATGTTCGG TERM 329 323523 - 323553 + T 100 -12.7 -4.43213 | gap 1, opp_overlap 323523 TAAACTTCACCAAAA GACCCGTAT-CTGC AATC GCAGCATGCGGGTC TTTTCATATGTTCGG BAD_0249 324422 - 323643 - | hypothetical protein TERM 330 324547 - 324533 - g 73 -4.9 -4.68601 | AGCGAAAACAAGAAA GCCGG AAAAG CCGAC ACGTTCCTCAGCTGG BAD_0250 324506 - 326611 + | hypothetical protein BAD_0251 326683 - 327633 + | hypothetical protein xerD 327972 - 327691 - | tyrosine recombinase XerD BAD_0253 328641 - 328048 - | hypothetical protein TERM 331 328712 - 328688 - H 75 -3.6 -4.86001 | overlap 328689 AGGATGCTACAAAAA GTGACGAAAA TGAGT CTTTCGTCAA TCAATGCTCCCCATC TERM 332 328783 - 328773 - H 75 -4 -4.84359 | opp_overlap 328773 GGAGCCTTACAAAAA GATT GCG AATC TTTTGTGGGAAACGA BAD_0254 328837 - 330741 + | JadJ pccB 330738 - 332384 + | propionyl-CoA carboxylase beta chain TERM 333 333748 - 333776 + G 76 -13.7 -3.03124 | CTACTGGGCCGAGCT CGCAGGCGGCGGC CAG GTCACCGCCAGCG TGTTCGACCGTCACG fas 332459 - 341794 + | fatty acid synthase Fas TERM 334 341888 - 341849 - f 100 -16.6 -3.2963 | opp_overlap 341854, overlap 341854 ATGACGGCCTGATAA GAAAAGGGCGATACTTCT GCAC AGATGTGTCGCCCTTTTC CATATGACATGGTCG TERM 335 341883 - 341854 - f 100 -10.7 -4.77165 | opp_overlap 341854, overlap 341849 GGCCTGATAAGAAAA GGGCGATACTTCT GCAC AGATGTGTCGCCC TTTTCCATATGACAT TERM 336 341854 - 341883 + F 100 -12.9 -4.23758 | opp_overlap 341854 341849 GGCCTGATAAGAAAA GGGCGATACTTCT GCAC AGATGTGTCGCCC TTTTCCATATGACAT BAD_0257 341953 - 342411 + | putative holo-[acyl-carrier protein] synthase TERM 337 342593 - 342612 + F 100 -15 -3.89212 | opp_overlap 342593 ATCAGAGAAGAAGAA GGCGTGCC TCAA GGCACGCC TTTCGTATATCCGTA TERM 338 342612 - 342593 - f 100 -15 -4.07466 | opp_overlap 342593 ATCAGAGAAGAAGAA GGCGTGCC TCAA GGCACGCC TTTCGTATATCCGTA TERM 339 342630 - 342651 + F 76 -13 -2.78384 | TCGTATATCCGTATG CCCGGGCA TACGAT TGCCCGGG TATGCTGGAACGGGC BAD_0258 342720 - 343397 + | hypothetical protein rpsO 343552 - 343821 + | 30S ribosomal protein S15 TERM 340 343830 - 343857 + F 100 -19.8 -4.65895 | opp_overlap 343825 343822 CCGATAACATTCTTC CGCCCGAGCGCC ATAT GGCGCCCGGGCG TTTTTGCATGACAGC TERM 341 344062 - 344043 - f 70 -10 -3.32644 | overlap 344041 344047 AAAGAAAACAAAGGA GGAACCCT ATGG AGGGTCCC GAAATCAAGGCTGTT TERM 342 346345 - 346359 + G 70 -10 -3.45023 | CCGTCGTTCCGACGA TCGCGA TGA TCGCGA TTATGATGATCGTCC TERM 343 346689 - 346708 + G 71 -9.2 -3.794 | opp_overlap 346672 GCTCCGAGCGTCCGC GTCGCCGC GTGC GCCGCGAC TTTGATCCGTTCGAA pnpA 344051 - 346729 + | polynucleotide phosphorylase/polyadenylase TERM 344 346778 - 346794 + F 71 -12.3 -2.52896 | opp_overlap 346781, overlap 346781 TCACTTCACCTACGA GAAGCCC ACT GGGCTTC TCGCTTGACGGCTCA TERM 345 346868 - 346898 + F 100 -27 -2.52464 | opp_overlap 346872, overlap 346872 ATAAGATGATTATCT GAAAGGCCCGCCCC CGT GGGGCGGGCCTTTC TGCATTCCGACACGC TERM 346 346894 - 346872 - f 100 -22 -3.62572 | opp_overlap 346868 346872 GATGATTATCTGAAA GGCCCGCCCC CGT GGGGCGGGCC TTTCTGCATTCCGAC TERM 347 346872 - 346894 + F 100 -22 -3.97368 | opp_overlap 346872, overlap 346868 GATGATTATCTGAAA GGCCCGCCCC CGT GGGGCGGGCC TTTCTGCATTCCGAC lemA 347032 - 347592 + | LemA-like protein TERM 348 347655 - 347607 - f 71 -9.6 -3.48772 | opp_overlap 347612, overlap 347611 347612 AACGTTTCCATACAA GAAAGGGGAGCGCTGACGAG GTGTGATGT CTTGCCAGCACTCCCTTTCC TGTATTACGGTCCGT TERM 349 347651 - 347611 - f 75 -6.8 -4.38927 | opp_overlap 347612, overlap 347607 347612 TTTCCATACAAGAAA GGGGAGCGCTGACGAG GTGTGATGT CTTGCCAGCACTCCCT TTCCTGTATTACGGT TERM 350 347612 - 347650 + F 83 -10.2 -3.93262 | opp_overlap 347612 347611 347607 TTCCATACAAGAAAG GGGAGCGCTGACGAGGTG TGA TGTCTTGCCAGCACTCCC TTTCCTGTATTACGG TERM 351 347650 - 347612 - f 71 -10.3 -3.22874 | opp_overlap 347612, overlap 347611 347607 TTCCATACAAGAAAG GGGAGCGCTGACGAG GTGTGATGT CTTGCCAGCACTCCC TTTCCTGTATTACGG BAD_0262 347731 - 349953 + | hypothetical protein TERM 352 351390 - 351366 - g 72 -12.1 -3.05844 | TTTCCCATCGCAACA CCCTCGGTCTG AGC CAGTCCGAGGA AGCCTGTCTGGAACT BAD_0263 350021 - 352213 + | hypothetical protein TERM 353 352301 - 352337 + F 100 -21.7 -2.52464 | opp_overlap 352304, overlap 352304 TGGCCCCGGCATGGA GAAGCCTACCGTTCGCC TAT GGCGATTGGTAGGCTTC TCCATTGGAAACACA TERM 354 352304 - 352334 + F 100 -17.6 -3.41878 | opp_overlap 352304, overlap 352301 CCCCGGCATGGAGAA GCCTACCGTTCGCC TAT GGCGATTGGTAGGC TTCTCCATTGGAAAC TERM 355 352334 - 352304 - f 95 -15.4 -3.35679 | opp_overlap 352304 352301 CCCCGGCATGGAGAA GCCTACCGTTCGCC TAT GGCGATTGGTAGGC TTCTCCATTGGAAAC BAD_0264 352451 - 353314 + | oxidoreductase BAD_0265 354093 - 353416 - | L-lysine permease TERM 356 354277 - 354260 - H 74 -7 -4.23892 | overlap 354250 354253 GGCAACCAGCCAAAA GCTGAG GTTTGG CTCAGC CAATCGCAGGACGGT TERM 357 355650 - 355635 - g 76 -6.8 -4.46212 | opp_overlap 355648, overlap 355636 CGCTGCAGGAGAAAA TGGACG GGCT CGCCCA CTGGAACGTGCCGTC yisV 354368 - 355879 + | GntR family transcriptional regulator BAD_0267 355898 - 357559 + | protease TERM 358 357695 - 357679 - g 75 -2.9 -4.87665 | CCCCACTGACAAAAA CGGCAAC CCG ATTCCCG TGACCATTCCGATCA TERM 359 358624 - 358604 - g 88 -6.9 -5.00616 | TCGCTCGCCAAAAAA CAGCATG AAGGACG CATGCTG GCGCTGATCGTACGC BAD_0268 357614 - 358645 + | hypothetical protein TERM 360 358702 - 358666 - f 74 -10.7 -3.53164 | opp_overlap 358663 ATACGAGTCATACAA GCCACGCGATTCGTGCG ATT CGAGTGATTCGCGTGGC CACTGTTGCGGATTG ispD 358689 - 359603 + | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase TERM 361 359648 - 359615 - f 91 -14.7 -3.06183 | opp_overlap 359598 TTGATTTTCATCGAA CGTTAAGTCCGTCGA CGTG TCGGCAGACTTAACG TTCAACACATTCACC pcp 359671 - 360366 + | pyrrolidone-carboxylate peptidase TERM 362 361141 - 361125 - g 74 -12.3 -3.13403 | overlap 361111 361110 361123 CTCCCGTGAGGAACA CGGCAAG CGT CTTGCCG CCGAACGCGCCACGC TERM 363 361528 - 361506 - g 76 -10.6 -3.7282 | GGAGGCCACGAAGAA GGTCAATGAG CTG CTCACCGACC TGAACGAGCGTCGCG BAD_0271 360601 - 362034 + | hypothetical protein pepC2 362057 - 363394 + | aminopeptidase C TERM 364 363432 - 363446 + F 76 -10 -3.85817 | opp_overlap 363432 GCGCCGTTAAGCAAA CAGTCC TGT GGACTG TTTGTAGGCGCGGCT TERM 365 363446 - 363432 - f 76 -10 -3.90112 | opp_overlap 363432 GCGCCGTTAAGCAAA CAGTCC TGT GGACTG TTTGTAGGCGCGGCT TERM 366 363625 - 363648 + F 76 -9.6 -3.84451 | opp_overlap 363631, overlap 363626 363631 GCTCTCGTAGCGAGG AGAAAACGCC GACA GGCGTTTTCA TTTAGATTTAGCCCG TERM 367 363626 - 363647 + F 79 -13.1 -2.90349 | opp_overlap 363631, overlap 363625 363631 CTCTCGTAGCGAGGA GAAAACGCC GACA GGCGTTTTC ATTTAGATTTAGCCC TERM 368 363642 - 363631 - f 79 -7.2 -4.4767 | opp_overlap 363626 363625 363631 GTAGCGAGGAGAAAA CGCC GACA GGCG TTTTCATTTAGATTT TERM 369 363631 - 363642 + F 83 -7.2 -4.59424 | opp_overlap 363631, overlap 363626 363625 GTAGCGAGGAGAAAA CGCC GACA GGCG TTTTCATTTAGATTT TERM 370 363660 - 363679 + F 100 -8.5 -5.60556 | TTCATTTAGATTTAG CCCGGGT CAACCA GCCCGGG TTTTTCTTTTGTCTT TERM 371 364776 - 364752 - g 89 -11.3 -4.15788 | AAGTGGTCGAAGAAA TCGCCGCACGC GTC GCGGCCGGCGA ACAGGGCATTCTCGG TERM 372 364918 - 364949 + G 74 -12.4 -3.15292 | gap 1, overlap 364909 364907 GCAGCTGCTGCACAC GCTTGCCGACGCG GTCGACG CGCGTC-GCAAGC TTGGCTGATGTTTCT aroG2 363824 - 364957 + | phospho-2-dehydro-3-deoxyheptonate aldolase aroG 365015 - 366199 + | phospho-2-dehydro-3-deoxyheptonate aldolase TERM 373 366413 - 366390 - g 78 -13.2 -3.18383 | gap 1, overlap 366371 ACCGTCACCGAGGAA GCCG-GCGTCA AGG TGACGCGCGGC ACCCTCGAAACCAAC pfs 366303 - 367010 + | 5'-methylthioadenosine nucleosidase BAD_0276 367254 - 368663 + | sensor protein BAD_0277 368660 - 369367 + | response regulator of two-component system TERM 374 370283 - 370262 - g 72 -11.6 -3.29144 | CGACCTCGGCGAGAA CTGGCCGA ACGAGG TCGGCCAG GGCGCCAAGGGCACT pstS 369534 - 370730 + | phosphate-binding transport protein of ABC transporter system TERM 375 370925 - 370912 - g 70 -5.2 -4.54727 | overlap 370922 GTTCGCAAAGCAAAA CGGC ACAGCA GCCG GTGAGCGGCAAGAAC pstC 370893 - 371846 + | phosphate ABC transporter permease pstA 371843 - 372841 + | phosphate ABC transporter phosphate-binding protein pstB 372886 - 373665 + | phosphate import ATP-binding protein pstB TERM 376 373803 - 373844 + F 100 -16.7 -5.18726 | opp_overlap 373810, overlap 373806 GGCAGCTCCTTTTCC CCGCAAACCGACGTTGAGA TTGC TCTCGGCGTCGGTTTGTTG TTTTTCTTGTGGAAG TERM 377 373806 - 373841 + F 100 -19.2 -4.68512 | opp_overlap 373810, overlap 373803 AGCTCCTTTTCCCCG CAAACCGACGTTGAGA TTGC TCTCGGCGTCGGTTTG TTGTTTTTCTTGTGG TERM 378 373837 - 373810 - f 71 -9.8 -3.53012 | opp_overlap 373806 373803 CCTTTTCCCCGCAAA CCGACGTTGAGA TTGC TCTCGGCGTCGG TTTGTTGTTTTTCTT BAD_0282 373897 - 374838 + | ABC transporter solute-binding protein TERM 379 374879 - 374906 + T 74 -6.9 -4.2349 | opp_overlap 374880, overlap 374880 AAAGTCGATAAAAAA AGGGCGATTCC ACTGAA GGAACCGCCCA TTTTCCGTATGAAAA TERM 380 374905 - 374880 - T 100 -12.6 -5.63504 | opp_overlap 374879 374880 AAGTCGATAAAAAAA GGGCGATTCC ACTGAA GGAACCGCCC ATTTTCCGTATGAAA BAD_0283 376430 - 374928 - | hypothetical protein TERM 381 376300 - 376315 + g 75 -2.6 -4.94487 | gap 1 CCGTTCTCCTTGAGA TGGAAGA ATT TCT-CCA TTTTCTCTTTTCTCA TERM 382 376653 - 376672 + H 100 -7.1 -5.80364 | TAGCGGTCGAATGTT GCTCTGC CTGCGT GCAGGGC TTTTTTTATTGCCCT rplJ 376738 - 377259 + | 50S ribosomal protein L10 rplL 377373 - 377753 + | 50S ribosomal protein L7/L12 TERM 383 377796 - 377820 + F 83 -10 -4.13014 | gap 1, opp_overlap 377796 377815 AAGCTGTAATGGAAA CCCCGTTTGCC GTAA GGCA-GCGGGG TTTTCCGCATATGGA TERM 384 378082 - 378059 - g 82 -12.4 -3.5936 | opp_overlap 378078, overlap 378060 GCGAAAGCGTGGAAA TCGGGCGCAA ACCG TTGCGCCCGC TGTCGGATGACGGGT TERM 385 378081 - 378060 - g 79 -15.9 -2.75294 | opp_overlap 378078, overlap 378059 CGAAAGCGTGGAAAT CGGGCGCAA ACCG TTGCGCCCG CTGTCGGATGACGGG BAD_0286 377968 - 379473 + | hypothetical protein BAD_0287 379470 - 383102 + | hypothetical protein TERM 386 383138 - 383122 - T 90 -10.9 -4.24948 | CGAGCATATCGAAAA CGTCATG GAG CATGACG ATTCGCAGACCCAGT BAD_0288 384215 - 383415 - | hypothetical protein TERM 387 383582 - 383617 + g 88 -13.2 -3.66874 | opp_overlap 383584 ACTGCGCATCCACAC CACCGTCCGGCATATC ATTA GCCATGCCGGACGGCG TTTCCGTACCGTTCG TERM 388 383615 - 383584 - G 83 -16.6 -2.64616 | opp_overlap 383582 TGCGCATCCACACCA CCGTCCGGCATATC ATTA GCCATGCCGGACGG CGTTTCCGTACCGTT TERM 389 384230 - 384207 - G 100 -14 -5.32565 | opp_overlap 384204 384207 CAAGGAATGAAAAAA GGTCATCATG CATG CATGATGACC TGATTGTTATGACCA TERM 390 384207 - 384230 + g 76 -14 -2.98545 | opp_overlap 384207, overlap 384204 CAAGGAATGAAAAAA GGTCATCATG CATG CATGATGACC TGATTGTTATGACCA BAD_0289 385216 - 384596 - | hypothetical protein TERM 391 384995 - 384982 - G 75 -8.1 -4.2558 | GACGCGGCACCAAAA CACGG CAAT CCGTG TCGAACATCGCTTCG BAD_0290 385375 - 385953 + | acetytransferase TERM 392 386854 - 386874 + G 80 -9.8 -4.04295 | CCAAAACCGTTGCCG TCAAGTCC ACGCA GGACTTGA TTTCCTTCTCGTTGG BAD_0291 386013 - 387209 + | hypothetical protein TERM 393 387260 - 387237 - f 82 -11 -3.85817 | opp_overlap 387237 ACCGTTTTTTACAAA GCCTGGAACC GCAT GGTTTCAGGC TTTTTTGATAATTTC TERM 394 387237 - 387260 + F 100 -13.2 -5.243 | opp_overlap 387237 ACCGTTTTTTACAAA GCCTGGAACC GCAT GGTTTCAGGC TTTTTTGATAATTTC TERM 395 387341 - 387316 - f 74 -9.7 -3.64487 | overlap 387334 GCAGAGTGCTAATAA TCGCGCTAGGA TAAG TCACAGCGCGA AAGGACGACGCCGTA TERM 396 387495 - 387512 + G 72 -11.3 -3.33815 | overlap 387481 GCGGAAGCCGAGACC CAGACCG CTTC CGGTCTG TTCATTCCGGACAAT groES 387432 - 387725 + | co-chaperonin GroES TERM 397 387741 - 387799 + F 79 -13.8 -2.76696 | opp_overlap 387748, overlap 387744 387748 GACTAGCGCGTAGCT GTCGAAACCCCGTTTCCCGTATATTGCG ATT TGCAAGGCTCGGGAGGCGGGGTTTCTGC GTTGTTCGGCGCCGA TERM 398 387744 - 387796 + F 89 -16.3 -2.6563 | opp_overlap 387748, overlap 387741 387748 TAGCGCGTAGCTGTC GAAACCCCGTTTCCCGTATATTGCG ATT TGCAAGGCTCGGGAGGCGGGGTTTC TGCGTTGTTCGGCGC TERM 399 387748 - 387792 + F 85 -11.3 -4.02253 | opp_overlap 387748, overlap 387744 387741 GCGTAGCTGTCGAAA CCCCGTTTCCCGTATATTGCG ATT TGCAAGGCTCGGGAGGCGGGG TTTCTGCGTTGTTCG TERM 400 387816 - 387851 + F 93 -9 -4.70659 | opp_overlap 387826, overlap 387817 387818 TTGTTCGGCGCCGAT TTGCGCAAAACGTTGG AATT TCAACGATTTGCGCCG TTTTTGGCTGTCGCG TERM 401 387817 - 387850 + F 73 -10.3 -3.41913 | opp_overlap 387826, overlap 387816 387818 TGTTCGGCGCCGATT TGCGCAAAACGTTGG AATT TCAACGATTTGCGCC GTTTTTGGCTGTCGC TERM 402 387818 - 387849 + F 78 -13.8 -2.64666 | opp_overlap 387826, overlap 387817 387816 GTTCGGCGCCGATTT GCGCAAAACGTTGG AATT TCAACGATTTGCGC CGTTTTTGGCTGTCG rpmG 388234 - 388404 + | 50S ribosomal protein L33 TERM 403 388425 - 388443 + F 100 -14.6 -5.5353 | opp_overlap 388425 ATCAAGCTTTCGAAA CCCGACCA ATT TGGTCGGG TTTTTTGTTACTCTG TERM 404 388443 - 388425 - f 95 -14.6 -3.55801 | opp_overlap 388425 ATCAAGCTTTCGAAA CCCGACCA ATT TGGTCGGG TTTTTTGTTACTCTG murB 388595 - 389665 + | UDP-N-acetylenolpyruvoylglucosamine reductase BAD_0295 389726 - 391270 + | cationic amino acid transporter fdxC 391307 - 391627 + | ferredoxin TERM 405 391696 - 391737 + F 100 -29 -4.96848 | CGCGGTCGATTTTAA CCGGTTTGCCGCTGACGT TTGCAC ACGTCAGCGGCAAACCGG TTTTTGTATGGAACG BAD_0297 391828 - 392976 + | N-succinyldiaminopimelate aminotransferase TERM 406 393027 - 393051 + T 100 -15.8 -3.44146 | opp_overlap 393027 CGTTGAAAACAAAAA GGACCTCCGA TTCAC TCGGAGGTCC TTCATTATGGCGGAG TERM 407 393051 - 393027 - T 100 -15.8 -5.45802 | opp_overlap 393027 CGTTGAAAACAAAAA GGACCTCCGA TTCAC TCGGAGGTCC TTCATTATGGCGGAG BAD_0298 393760 - 393161 - | hypothetical protein BAD_0299 393958 - 396000 + | putative outer membrane protein BAD_0300 396002 - 397141 + | xylanase Y BAD_0301 397141 - 398727 + | pyridine nucleotide-disulphide oxidoreductase BAD_0302 398724 - 400175 + | esterase TERM 408 400239 - 400212 - f 79 -11.3 -3.7108 | opp_overlap 400203 400200 ATGCTGATATGTAAA CAGGGACGGTC TTTGTG GATCGTCCCTG TCGCATAATGGTTTG TERM 409 400583 - 400601 + F 71 -10.3 -3.18264 | opp_overlap 400592 TCGGCTGTCTTGTTG GGTACCC AACTC GGGTACC TTGCTGGGTACCGGA TERM 410 400734 - 400709 - f 100 -11.9 -5.52384 | overlap 400733 TTGGCATGAAAAAAA GGGCTTCCGGA TTTC TCCGAAAACCC TCAAGGCGGAGTCAG BAD_0303 400971 - 402386 + | DNA-damage-inducible protein P BAD_0304 402392 - 403792 + | hypothetical protein TERM 411 404195 - 404183 - g 70 -10.5 -3.55784 | overlap 404179 GAGAAAACCAAGGAA CGCGG CAT CCGCG TCTGCAACGTGCTGC BAD_0305 403871 - 404860 + | 2-hydroxyacid dehydrogenase BAD_0306 404920 - 405558 + | hypothetical protein BAD_0307 405604 - 406266 + | AbrB family trancriptional regulator TERM 412 406295 - 406313 + F 74 -6.6 -4.30844 | overlap 406297 CATTTTTATGAGATT CCTGCGCG TGG TGCGCATG TTTTGGTCCTAGACT TERM 413 406416 - 406395 - g 74 -11.6 -3.53224 | CATTCGTCTGGCAAA GCTGGTGG GTGTCG CCACCAGC TACGTCGGTATGAGC TERM 414 407038 - 406980 - g 73 -4.6 -4.62069 | overlap 406985 407010 GGTCGAGGCCAAAAA GAAG-ACCGGCTCCGACTTCATGCTT ATCAACCCG ATGCACGCCG-CGGAGCCGGTGCCTC CGCTGACGCCATCGC malQ1 406327 - 408498 + | 4-alpha-glucanotransferase TERM 415 408516 - 408556 + F 100 -11.2 -4.87626 | gap 1, overlap 408520 TTCTATAGGCGATTC CATGGGGTGTCCACAGGTC CGAC GGTCTGCGGACACCCT-TG TTTTTCGTGTTGCCG TERM 416 408520 - 408553 + F 100 -15.3 -4.53398 | overlap 408516 ATAGGCGATTCCATG GGGTGTCCACAGGTC CGAC GGTCTGCGGACACCC TTGTTTTTCGTGTTG rplM 408770 - 409219 + | 50S ribosomal protein L13 rpsI 409240 - 409731 + | 30S ribosomal protein S9 TERM 417 409753 - 409787 + T 100 -21.7 -3.36273 | opp_overlap 409757, overlap 409757 CAGCAAGCTTTATTC GAAACCCCTCGGAAA TTCGT TTTCCGAGGGGTTTC TTGGTATTCGAACGA TERM 418 409783 - 409757 - T 100 -16.7 -3.60475 | opp_overlap 409753 409757 AAGCTTTATTCGAAA CCCCTCGGAAA TTCGT TTTCCGAGGGG TTTCTTGGTATTCGA TERM 419 409757 - 409783 + T 100 -16.7 -4.33153 | opp_overlap 409757, overlap 409753 AAGCTTTATTCGAAA CCCCTCGGAAA TTCGT TTTCCGAGGGG TTTCTTGGTATTCGA BAD_0311 411839 - 409824 - | glycogen operon protein GlgX BAD_0312 412271 - 411915 - | hypothetical protein TERM 420 413179 - 413167 - g 75 -7.7 -4.2558 | CATTTTCGATGAAAA GTTGC AGC GCAAC AAGGAGCAGTTCGGC BAD_0313 412571 - 413575 + | zinc-binding dehydrogenase ywbC 413861 - 414349 + | hypothetical protein TERM 421 414424 - 414466 + T 100 -10.6 -5.19328 | opp_overlap 414424 ACGGAAGCAAACAAA GAAGCGTGCGCTGAACCT TATATAC GGGTTCGGAACACGCTTC TTTTTGTTATGCAAT TERM 422 414466 - 414424 - T 91 -9.9 -4.57304 | opp_overlap 414424 ACGGAAGCAAACAAA GAAGCGTGCGCTGAACC TTATATACG GGTTCGGAACACGCTTC TTTTTGTTATGCAAT BAD_0315 415641 - 414511 - | Rok family repressor TERM 423 416772 - 416795 + G 70 -4.6 -4.56775 | gap 1, overlap 416768 TGTGTGATCGGCACG CTG-GGCATGT ATT ACATTCCGCAG TTTTTCGGGGCGAAT rbtT 415824 - 417128 + | hypothetical protein TERM 424 417203 - 417174 - g 75 -2.9 -5.00884 | ATTTTTCTCAAAAAA CATCATTATCCAC AAAG GAGAATAATCATG AAGGCAGTCGTTCTC BAD_0317 417135 - 418241 + | xylitol (sorbitol) dehydrogenase TERM 425 418649 - 418705 + G 71 -6.6 -4.16681 | gap 1, opp_overlap 418666 GCGTGATGTGGTGTG CCATGTGCGTCCGGAAA-CCATACGTC TGCT GATGTCTGGATTTCCGGAAACGTCTGG TTTTGCAATGGTGTT BAD_0318 418281 - 419252 + | transcriptional regulator BAD_0319 419606 - 422338 + | bifunctional acetaldehyde-CoA/alcohol dehydrogenase TERM 426 422409 - 422436 + F 100 -20 -5.31275 | opp_overlap 422409 AGAAGTCGTGCAAAA GGAGCCTGATGG GAAA CCATCAGGCTCC TTTTTTATAGTGAGG TERM 427 422436 - 422409 - f 100 -20 -4.10007 | opp_overlap 422409 AGAAGTCGTGCAAAA GGAGCCTGATGG GAAA CCATCAGGCTCC TTTTTTATAGTGAGG TERM 428 422559 - 422545 - f 71 -4.9 -4.61527 | overlap 422546 AAAACGTTGGAAAAA CCGCG ACACG CGCGA ATTCCATATGTTCAC rpsJ 422798 - 423106 + | 30S ribosomal protein S10 rplC 423124 - 423765 + | 50S ribosomal protein L3 rplD 423772 - 424437 + | 50S ribosomal protein L4 rplW 424434 - 424739 + | 50S ribosomal protein L23 rplB 424776 - 425606 + | 50S ribosomal protein L2 rpsS 425622 - 425900 + | 30S ribosomal protein S19 rplV 425917 - 426276 + | 50S ribosomal protein L22 rpsC 426279 - 427082 + | 30S ribosomal protein S3 rplP 427090 - 427509 + | 50S ribosomal protein L16 rpmC 427509 - 427766 + | 50S ribosomal protein L29 rpsQ 427766 - 428026 + | 30S ribosomal protein S17 TERM 429 428054 - 428082 + F 95 -18.2 -2.70932 | AGGCTCCGTGAGTCA CCCCGCCTGCTT CTAGC AGGCAGGCGGGG TGCTTGGGGAGAACC rplN 428118 - 428486 + | 50S ribosomal protein L14 rplX 428488 - 428823 + | 50S ribosomal protein L24 rplE 428820 - 429392 + | 50S ribosomal protein L5 TERM 430 429424 - 429404 - g 70 -4 -4.64766 | gap 1, overlap 429421 CTGATATGGCAAAAA CCGCTCTTA AGAA CAAG-GCGG CCGCTAAGCCGAAGT rpsN 429394 - 429579 + | 30S ribosomal protein S14 TERM 431 430034 - 430049 + G 71 -8.2 -4.10552 | TCGACCGAGGCATCG GCGGCG AGAT CGTCGC TTTCGTTTGGTGAGA rpsH 429664 - 430062 + | 30S ribosomal protein S8 rplF 430080 - 430619 + | 50S ribosomal protein L6 rplR 430619 - 430990 + | 50S ribosomal protein L18 rpsE 430987 - 431712 + | 30S ribosomal protein S5 rpmD 431709 - 431894 + | 50S ribosomal protein L30 rplO 431897 - 432343 + | 50S ribosomal protein L15 TERM 432 432422 - 432369 - f 100 -18.9 -3.06915 | opp_overlap 432373 432378, overlap 432378 ATGTAGCTGACTGAA GCTCAGACATGAGGCTTCCCCCGCT TTAG AGCGGGGGAAGCCTCATTCGTTTGC AGTCAAAATGCAATC TERM 433 432373 - 432417 + F 100 -22.4 -3.60296 | gap 1, opp_overlap 432369 432378, overlap 432378 AGCTGACTGAAGCTC AGACATGAGGCTTCCCCCGCT TTAG AGCGGGGGAAGCCTCAT-TCG TTTGCAGTCAAAATG TERM 434 432413 - 432378 - f 100 -27.8 -2.9186 | opp_overlap 432373 432378, overlap 432369 ACTGAAGCTCAGACA TGAGGCTTCCCCCGCT TTAG AGCGGGGGAAGCCTCA TTCGTTTGCAGTCAA TERM 435 432378 - 432413 + F 100 -27.8 -3.53031 | opp_overlap 432378 432369, overlap 432373 ACTGAAGCTCAGACA TGAGGCTTCCCCCGCT TTAG AGCGGGGGAAGCCTCA TTCGTTTGCAGTCAA secY 432536 - 433909 + | preprotein translocase subunit SecY TERM 436 433919 - 433957 + F 100 -14.7 -5.10767 | AAGTAACCACTTGAA TCGTGATGTCGTTTCCG TTGAT CGGGAGCGGTATCACGA TTTTTATGTTAAGTA TERM 437 434003 - 433989 - f 70 -7.1 -4.15565 | TCCATCATCCGAAAA TCCCC GTTGA GGGGA ATGAACGAAACGGAG adk 434027 - 434587 + | adenylate kinase TERM 438 434615 - 434672 + F 100 -21.6 -3.65581 | gap 1, opp_overlap 434613 434625, overlap 434618 434620 434625 GCAGAATAACATATT TCCAACGAAAGCGGGAATCGCGACACG CCGAA CGTGTCTTGATTCCCGCTTTCGT-GTA TTCTTGCAAGTTGGT TERM 439 434618 - 434670 + F 100 -24.4 -3.40498 | opp_overlap 434613 434625, overlap 434615 434620 434625 GAATAACATATTTCC AACGAAAGCGGGAATCGCGACACG CCGAA CGTGTCTTGATTCCCGCTTTCGTG TATTCTTGCAAGTTG TERM 440 434620 - 434668 + F 100 -27 -3.26712 | opp_overlap 434613 434625, overlap 434618 434615 434625 ATAACATATTTCCAA CGAAAGCGGGAATCGCGACACG CCGAA CGTGTCTTGATTCCCGCTTTCG TGTATTCTTGCAAGT TERM 441 434663 - 434625 - f 100 -18.2 -3.91352 | opp_overlap 434620 434618 434615 434625 ATATTTCCAACGAAA GCGGGAATCGCGACACGC CGA ACGTGTCTTGATTCCCGC TTTCGTGTATTCTTG TERM 442 434625 - 434663 + F 100 -19.7 -3.97056 | opp_overlap 434625, overlap 434620 434618 434615 ATATTTCCAACGAAA GCGGGAATCGCGACACG CCGAA CGTGTCTTGATTCCCGC TTTCGTGTATTCTTG infA 434735 - 434953 + | translation initiation factor IF-1 rpmJ 434977 - 435090 + | 50S ribosomal protein L36 rpsM 435227 - 435604 + | 30S ribosomal protein S13 TERM 443 435613 - 435592 - f 70 -6.5 -4.08557 | overlap 435593 435605 CGCCGGAAAGAAGAA GGCCACCAA GTAA TCGGTGGCT GACAGTTCAAGCCAC rpsK 435689 - 436087 + | 30S ribosomal protein S11 rpoA 436132 - 437166 + | DNA-directed RNA polymerase subunit alpha rplQ 437255 - 437722 + | 50S ribosomal protein L17 TERM 444 437743 - 437768 + F 100 -16.9 -3.65693 | opp_overlap 437743 TCTTAGCTGATTGAA GGCCGGGAATC GCAA GGTTCCCGGCC TTTGCCATATCTGCT TERM 445 437768 - 437743 - f 91 -14.7 -3.06796 | opp_overlap 437743 TCTTAGCTGATTGAA GGCCGGGAATC GCAA GGTTCCCGGCC TTTGCCATATCTGCT TERM 446 438642 - 438616 - g 81 -8.6 -4.72272 | GGTTTGCAGGAAAAA TGGCGGCTCCGC TGC GCGAAGGCTCCA CAGGACCGATCGCGC truA 437829 - 438749 + | tRNA pseudouridine synthase A BAD_0350 438926 - 441106 + | hypothetical protein BAD_0351 441211 - 442011 + | hypothetical protein TERM 447 442099 - 442076 - T 95 -5.3 -5.42975 | GCAGATAAACAAAAA GGCCGAAAC GCCATT GTTTCAACC TTCATTGCATGCGGA BAD_0352 443201 - 442317 - | hypothetical protein TERM 448 443439 - 443388 - g 71 -6.4 -4.16943 | gap 1, opp_overlap 443408, overlap 443389 TGGCATATCTGAAAA CCCCTCACGCTGCGAAGCACGCTCG CGT CGAGCTTGATCCGC-GTGCGGGAAG CTTCACCGTATGGGC nusA 443279 - 444331 + | transcription elongation factor NusA TERM 449 444382 - 444352 - f 100 -17.7 -3.48395 | opp_overlap 444355, overlap 444355 ACTTCCGGTAGACAA CAAGCCCGTGGAC GTACA ATCCACGGGCTTG AGTATGCTGGACTCG TERM 450 444355 - 444379 + F 81 -12.9 -3.14468 | opp_overlap 444352 444355 TCCGGTAGACAACAA GCCCGTGGA CGTACAA TCCACGGGC TTGAGTATGCTGGAC TERM 451 444379 - 444355 - f 93 -13.6 -3.88232 | opp_overlap 444355, overlap 444352 TCCGGTAGACAACAA GCCCGTGGAC GTACA ATCCACGGGC TTGAGTATGCTGGAC TERM 452 446207 - 446159 - g 76 -12.4 -3.38812 | opp_overlap 446202, overlap 446157 446166 TGGCCGTCAACAAGA TCGATAAGCCGGGCGCCAACCC GGACA AGGTCCGCGGCCAGCTCACCGA ATACGGTCTGGTTCC infB 444544 - 447339 + | translation initiation factor IF-2 TERM 453 447412 - 447376 - f 100 -22.4 -3.14963 | opp_overlap 447380, overlap 447380 TCGATAACTAGGTAA GGAACGCCCACAGCCG GTTCA CGACTGCGGGCGTTCC GTGATACAACAAGAA TERM 454 447408 - 447380 - f 100 -16 -3.3903 | opp_overlap 447380, overlap 447376 TAACTAGGTAAGGAA CGCCCACAGCCG GTTCA CGACTGCGGGCG TTCCGTGATACAACA TERM 455 447380 - 447408 + F 72 -11.6 -3.09516 | opp_overlap 447380 447376 TAACTAGGTAAGGAA CGCCCACAGCCG GTTCA CGACTGCGGGCG TTCCGTGATACAACA TERM 456 447469 - 447487 + G 76 -13.1 -3.35371 | opp_overlap 447460 447464 447463 447459, overlap 447486 AGGAACCAATCCCCG CGCCGCG CGCAT CGCGGCG TTGATTCAGCGTGTG rbfA 447449 - 447952 + | ribosome-binding factor A TERM 457 448061 - 448041 - g 76 -10.3 -3.83026 | GCCCTGCACATGAAA CGCGTCGGC CAT GCCGGCACG CTCGACCCGATGGCC TERM 458 448741 - 448723 - g 74 -6.7 -4.29176 | ATACGGAAGCCAAAA CCTTCAC CAACC GCGAAGG CATCGAAGTGACACG truB 447936 - 449006 + | tRNA pseudouridine synthase B ribF 449076 - 450305 + | riboflavin kinase radA 451854 - 450436 - | DNA repair protein RadA TERM 459 452245 - 452214 - g 70 -10.8 -3.54543 | ACGGAGCCCGCCAAA CCGTCGATCGATGC CGTG GCATTGCCCGACGG GGCCAGCGAGCTGCT BAD_0359 451995 - 452648 + | hypothetical protein BAD_0360 452873 - 452697 - | hypothetical protein TERM 460 452981 - 452944 - R 100 -15.7 -3.53343 | opp_overlap 452949, overlap 452949 AAGCGTCCGCTCAAA CAAAATCCCGCGATTCC TTTC GGAGTCGCGGGATTTTT GCTATCTGCGCGGCG TERM 461 452976 - 452949 - R 100 -15.6 -4.86731 | opp_overlap 452949, overlap 452944 TCCGCTCAAACAAAA TCCCGCGATTCC TTTC GGAGTCGCGGGA TTTTTGCTATCTGCG TERM 462 452949 - 452976 + r 100 -17.8 -4.84527 | opp_overlap 452949 452944 TCCGCTCAAACAAAA TCCCGCGATTCC TTTC GGAGTCGCGGGA TTTTTGCTATCTGCG BAD_0361 453745 - 453047 - | ribose-5-phosphate isomerase A TERM 463 453963 - 453919 - R 100 -27.4 -3.74519 | opp_overlap 453913 453924, overlap 453920 453922 AAGACGCGCATGAAA TGACATGTGGGGAGCGGCTT GCGTA AAGCCGCTCCCCACATGTCT CGCTCAGCTATGTTT TERM 464 453962 - 453920 - R 100 -30.9 -2.84229 | opp_overlap 453913 453924, overlap 453919 453922 AGACGCGCATGAAAT GACATGTGGGGAGCGGCTT GCGTA AAGCCGCTCCCCACATGTC TCGCTCAGCTATGTT TERM 465 453960 - 453922 - R 100 -27.7 -2.96873 | opp_overlap 453913 453924, overlap 453920 453919 ACGCGCATGAAATGA CATGTGGGGAGCGGCTT GCGTA AAGCCGCTCCCCACATG TCTCGCTCAGCTATG TERM 466 453924 - 453958 + r 100 -24.5 -2.91582 | opp_overlap 453922 453920 453919, overlap 453913 GCGCATGAAATGACA TGTGGGGAGCGGCTT GCGTA AAGCCGCTCCCCACA TGTCTCGCTCAGCTA rnh 455304 - 453967 - | ribonuclease H BAD_0363 456797 - 455409 - | hypothetical protein TERM 467 455759 - 455771 + g 73 -10.5 -3.60296 | TGATGTTGATGTATT GCGGC ACC GCCGC TTTGACGTCCACATC BAD_0364 457560 - 456799 - | two-component response regulator TERM 468 456845 - 456866 + g 82 -8.7 -4.30576 | gap 1 TATTCCGCGTATGCG CGGCAGGTGG TGG TCACC-GCCG TTTTCGTGATGGGAA TERM 469 457739 - 457727 - R 85 -9.1 -4.4009 | TTTCATGCCAGAAAA GCACG TTT CGTGC CATACGGCGGATATC TERM 470 457796 - 457760 - R 100 -16.8 -3.39327 | gap 1, opp_overlap 457767 457795, overlap 457767 GGCGGATATCGACAA CGAAAAAGACCCGCTCC ATAC GGAACGGGTCTTTT-CG CGCTACGCCTTGATT TERM 471 457767 - 457790 + r 91 -12.4 -4.11216 | opp_overlap 457760 457767 ATCGACAACGAAAAA GACCCGCTCC ATAC GGAACGGGTC TTTTCGCGCTACGCC TERM 472 457790 - 457767 - R 100 -14.6 -4.93968 | opp_overlap 457767, overlap 457760 ATCGACAACGAAAAA GACCCGCTCC ATAC GGAACGGGTC TTTTCGCGCTACGCC pgm 459602 - 457830 - | phosphoglucomutase TERM 473 459272 - 459288 + g 77 -11.5 -3.68302 | GGCCGATGTACAGCG GGCCGGT GAC GCCGGCC TTCTTGCGGTATTCG TERM 474 459477 - 459492 + g 84 -6 -5.0133 | overlap 459478 CAGATCTGCTGGGGT GGCGGG CATT CCCGCA TTTTTTGCAACCATA TERM 475 459722 - 459759 + H 100 -15 -5.7946 | opp_overlap 459722 CATTTTTAGACGCAA GACCTGGAATGTGGCA TTGGTT TGCCATGTTCCGGGTC TTTTTTTGTTGCAAA TERM 476 459790 - 459778 - H 80 -4.7 -5.00616 | TTTTGTTGCAAAAAA GCCGC GCT GCGTC ATCGAATCCCATCGG TERM 477 459985 - 460006 + G 82 -12.3 -3.58522 | gap 1, opp_overlap 459997 AGGGCGTGCTTGGCG CGGTC-CCGC AAA GCGGTGACCG TTTCCAGGTCGTCAT TERM 478 461378 - 461360 - g 72 -11.6 -3.40403 | CGCCGCCGATCAGAA GGCCGCCG CTC CGGCGGTC GAAGCCAAGGAAGCC ptsG 459828 - 461921 + | glucose-specific II BC component BAD_0367 461923 - 462801 + | transcription antiterminator LicT BAD_0368 464049 - 462856 - | hypothetical protein TERM 479 464452 - 464431 - g 77 -11.5 -3.65812 | GGTCTCCGAATACAA GGCCGCAGC CGAC GCCGCAGCC GAGGAATACACCACC BAD_0369 464177 - 465463 + | seryl-tRNA synthetase TERM 480 465495 - 465535 + T 100 -17 -3.07344 | gap 1, opp_overlap 465502, overlap 465502 CGTCTGATATGAATC CGTGAAAGCGGCGTTGGCA TTTG TGCCGGCGCCGCTTTT-CG TATGTTGGACGGTCC TERM 481 465529 - 465502 - T 85 -12.6 -3.58037 | opp_overlap 465495 465502 TATGAATCCGTGAAA GCGGCGTTGGCA TTTG TGCCGGCGCCGC TTTTCGTATGTTGGA TERM 482 465502 - 465529 + T 100 -17 -4.43213 | opp_overlap 465502, overlap 465495 TATGAATCCGTGAAA GCGGCGTTGGCA TTTG TGCCGGCGCCGC TTTTCGTATGTTGGA TERM 483 465817 - 465788 - T 100 -16.6 -3.39895 | opp_overlap 465788 GCCCGCACCAATCAA GGGCTTACCGAA GGATTT TTCGGTAAGCCC TTTTCCATGCCGTTT TERM 484 465788 - 465817 + T 100 -17.3 -4.20106 | opp_overlap 465788 GCCCGCACCAATCAA GGGCTTACCGAAG GATT TTTCGGTAAGCCC TTTTCCATGCCGTTT BAD_0370 466543 - 465863 - | response regulator of two-component system BAD_0371 468033 - 466597 - | histidine kinase sensor of two component system TERM 485 467845 - 467826 - G 75 -2 -4.99035 | overlap 467828 467830 TGATCCACAGAAAAA TATAGGCG ATCG CGCCCGCA CCGAAGAAAAACGTG TERM 486 467869 - 467857 - G 100 -9.1 -5.10461 | CGCACCGAAGAAAAA CGTGG TGA CCACG AAAATGAAACGGATG BAD_0372 468120 - 470123 + | hypothetical protein TERM 487 470409 - 470384 - g 70 -10.5 -3.53091 | overlap 470402 470403 470405 ACCGGTTCCGTCAAA TCGGCTGATCC AGCC AAATCAGCCGA GCCGGTCGACCCCTC BAD_0373 470120 - 470734 + | hypothetical protein TERM 488 470744 - 470715 - T 86 -12.1 -3.87641 | overlap 470734 AACAGTCCCCAGAAA GCCAGCAGCGCCA ACGA TAGCGCCGCCGAC ACCACCACACACGTG BAD_0374 472564 - 470693 - | hypothetical protein TERM 489 472800 - 472773 - R 100 -15.6 -3.53811 | opp_overlap 472784 472785 GCGATTTCCGCCAAA CCGACGCTTAGG CCCT CCTCAGCGTCGG TCTCGCGGATTGGGG TERM 490 472785 - 472840 + r 72 -11.9 -2.71712 | gap 1, opp_overlap 472773, overlap 472784 AAACCGACGCTTAGG CCCTCCTCAGCGTCGGTCTCG-CG GATTGGGGG CGATGGGATCGACGCTGAGATGGG ATTTGGGGGAGAAGG BAD_0375 474030 - 472876 - | AraJ-like protein TERM 491 474013 - 473995 - G 78 -13.8 -3.21099 | opp_overlap 473991 GGCGCCGAGGATGAA GGCGCCGG AGG CCAGCGCC AGAATGCTTCTCTTC TERM 492 474165 - 474184 + H 88 -13.6 -3.44622 | opp_overlap 474165 AAAGGCAAAGAAAAA GGCGGAAC CGAA GTTCCGCC TTAGTTGTCGGGCTG TERM 493 474184 - 474165 - H 100 -13.6 -5.34381 | opp_overlap 474165 AAAGGCAAAGAAAAA GGCGGAAC CGAA GTTCCGCC TTAGTTGTCGGGCTG lysS 474277 - 476040 + | lysyl-tRNA synthetase TERM 494 476032 - 476058 + F 84 -13.8 -3.09492 | overlap 476037 CCGCTTGTGAAGCCG CTGAACTGAGGC GGA GCCTCAGTTCAA TATTCGGCTTCACGC TERM 495 476037 - 476053 + F 78 -12.3 -3.19293 | overlap 476032 TGTGAAGCCGCTGAA CTGAGGC GGA GCCTCAG TTCAATATTCGGCTT TERM 496 476106 - 476088 - f 91 -14.6 -3.02144 | opp_overlap 476092, overlap 476092 CGAGGCGGTCGAAGA GGAAGCCC TGT GGGCTTCC GTGCCGCCGGAGCCA TERM 497 476190 - 476138 - g 100 -8.3 -5.42198 | opp_overlap 476152, overlap 476147 476152 CCTTAAAAAATAAAA GAGCAATTACTAAAGGGCGTTCCCA ATA CGGGAGCGCCCTTTTGCATACCCTC GCACACCCAACATCT TERM 498 476181 - 476147 - g 79 -15 -2.9021 | opp_overlap 476152, overlap 476138 476152 ATAAAAGAGCAATTA CTAAAGGGCGTTCCCA ATA CGGGAGCGCCCTTTTG CATACCCTCGCACAC TERM 499 476176 - 476152 - g 91 -13.5 -3.86106 | opp_overlap 476152, overlap 476147 476138 AGAGCAATTACTAAA GGGCGTTCCCA ATA CGGGAGCGCCC TTTTGCATACCCTCG TERM 500 476152 - 476176 + G 100 -15 -4.1899 | opp_overlap 476152 476147 476138 AGAGCAATTACTAAA GGGCGTTCCC AATAC GGGAGCGCCC TTTTGCATACCCTCG TERM 501 476295 - 476316 + G 70 -5.1 -4.49556 | gap 1, overlap 476269 476293 476292 AGTGGTTATCGGGGC CACGCTGTCG TGG CGG-GGCGTG TTTCTTTACTCGCAG TERM 502 477228 - 477213 - g 74 -5.4 -4.54306 | gap 1 CGCAAGAAAAAAATA CGGCGAG GCG CT-GCCG CTGTGCACGTTCTCC BAD_0377 476095 - 477291 + | 1,4-dihydroxy-2-naphthoate octaprenyltransferase gpm 477305 - 478135 + | 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase TERM 503 478189 - 478230 + T 81 -11.8 -3.61517 | gap 1, opp_overlap 478189 478195, overlap 478195 CGCATGAAACACATA CGAAAAGGTGGGAACCTGT ATACC GTAGGTTCCCATC-TTTCG TTATTGCCGGCGCCT TERM 504 478225 - 478195 - T 75 -6.9 -4.43864 | opp_overlap 478189 478195, overlap 478189 AAACACATACGAAAA GGTGGGAACCT GTATACCGT AGGTTCCCATC TTTCGTTATTGCCGG TERM 505 478195 - 478225 + T 86 -10.5 -4.07618 | opp_overlap 478195 478189, overlap 478189 AAACACATACGAAAA GGTGGGAACCTGT ATACC GTAGGTTCCCATC TTTCGTTATTGCCGG BAD_0379 480308 - 478362 - | myosin-crossreactive antigen TERM 506 478772 - 478786 + g 74 -7.1 -4.42386 | TGTTGGCGTGGTTCT TCGCC AAGTC GGCGA TTTTGTCGGTCGGCA TERM 507 478839 - 478860 + g 82 -12.3 -3.66732 | CTCGCAGATCTCCTC GCCGGTGCA ATCC TGCATCGGC TTCTTCACATAGTTG TERM 508 480312 - 480328 + r 73 -5.1 -4.61231 | opp_overlap 480312 GTATACGGGCATGAA CTGGACG CGA TGTCTAG TTTTTACGACTATCG TERM 509 480532 - 480493 - R 100 -21.6 -3.58905 | opp_overlap 480499, overlap 480494 ATCTGCCACATATAA GCGAGATGGGTGGCTTCC AAAC GGAAACCACCCATCTCGT CAAGGAAAATGCAAG TERM 510 480531 - 480494 - R 100 -25.1 -2.75022 | opp_overlap 480499, overlap 480493 TCTGCCACATATAAG CGAGATGGGTGGCTTCC AAAC GGAAACCACCCATCTCG TCAAGGAAAATGCAA TERM 511 480499 - 480526 + r 83 -14.2 -2.78384 | opp_overlap 480494 480493 CACATATAAGCGAGA TGGGTGGCTTCC AAAC GGAAACCACCCA TCTCGTCAAGGAAAA BAD_0380 481268 - 480564 - | response regulator of two-component system BAD_0381 481357 - 482616 + | sensor protein TERM 512 482653 - 482694 + T 95 -14.4 -3.66429 | opp_overlap 482657, overlap 482656 482679 ACACGCCATATACGG CAAAGGGCCGCTTCCGCA GGTTGG TGCGGAAGCGACCCAATG TTGTTACCGGTTATT TERM 513 482656 - 482691 + T 83 -14.7 -2.63817 | opp_overlap 482657, overlap 482653 482679 CGCCATATACGGCAA AGGGCCGCTTCCGCA GGTTGG TGCGGAAGCGACCCA ATGTTGTTACCGGTT TERM 514 482690 - 482657 - T 100 -20.4 -3.65425 | opp_overlap 482656 482653 482679 GCCATATACGGCAAA GGGCCGCTTCCGCA GGTTGG TGCGGAAGCGACCC AATGTTGTTACCGGT BAD_0382 482991 - 482737 - | hypothetical protein serC 484160 - 483018 - | phosphoserine aminotransferase BAD_0384 484367 - 485299 + | hypothetical protein TERM 515 485662 - 485623 - g 73 -4.9 -4.66833 | gap 2, overlap 485625 485626 485655 TCTCAAGCCGAAAAA GACGCCGAAG--CCGCCGC AGCG GCAGCGGAACAGCAGCGTC AGCAGCAGGCCCAGG BAD_0385 485362 - 486111 + | hypothetical protein TERM 516 486131 - 486157 + F 100 -13.1 -4.71708 | opp_overlap 486131 TTGACATTGAGCTAA GGGCGTATTTC CGTGA GGAATACGCCC TTTTGCTTTGTTATT TERM 517 486157 - 486131 - f 76 -11.7 -3.09015 | gap 1, opp_overlap 486131 TTGACATTGAGCTAA GGGCGTATTTCC GTGA GGAA-TACGCCC TTTTGCTTTGTTATT BAD_0386 486252 - 487307 + | universal stress family protein TERM 518 487400 - 487342 - T 100 -22.7 -5.01546 | gap 1, opp_overlap 487349, overlap 487343 487352 AAATCGATATAAAAA CCGCATAG-AAGAGGGTGGCTGCGATTC CAAC GAATCGCAGCCACCCTCTAACTATGTGC GGTACGTGCCTCAGT TERM 519 487399 - 487343 - T 100 -26.2 -3.59301 | gap 1, opp_overlap 487349, overlap 487342 487352 AATCGATATAAAAAC CGCATAG-AAGAGGGTGGCTGCGATTC CAAC GAATCGCAGCCACCCTCTAACTATGTG CGGTACGTGCCTCAG TERM 520 487349 - 487393 + T 100 -22.4 -2.89881 | gap 1, opp_overlap 487343 487342 487352 TATAAAAACCGCATA G-AAGAGGGTGGCTGCGATTC CAAC GAATCGCAGCCACCCTCTAAC TATGTGCGGTACGTG TERM 521 487389 - 487352 - T 100 -28.7 -3.55323 | opp_overlap 487349, overlap 487343 487342 AAAAACCGCATAGAA GAGGGTGGCTGCGATTC CAAC GAATCGCAGCCACCCTC TAACTATGTGCGGTA BAD_0387 487824 - 487411 - | hypothetical protein thyA 488153 - 488953 + | thymidylate synthase dfrA 489023 - 489697 + | dihydrofolate reductase ptpA 489704 - 490207 + | low molecular weight protein-tyrosine-phosphatase TERM 522 490223 - 490253 + T 100 -17.7 -5.42198 | TTTTTTATTGCGATT GCGGCATGCTTGA TGGTT TCAAGCGTGCCGC TTTTGTTTTTTGCGA TERM 523 490656 - 490636 - T 100 -5.3 -5.46706 | opp_overlap 490636 AGGGTAAAAGAAAAA CCCCGGC GGATTGG GCTGGGG TTTGGTGGCGACCAC TERM 524 490842 - 490803 - T 77 -7.7 -4.23892 | opp_overlap 490803, overlap 490788 490796 CGCAATTATGCAAAA CTGCGGCGTGTCACG GTGTGTTGGG CGTGGCGCGCCGCGG TTTCGCGGGAAAGGA TERM 525 490803 - 490842 + T 95 -14.3 -3.53012 | opp_overlap 490788 490803 490796 CGCAATTATGCAAAA CTGCGGCGTGTCACG GTGTGTTGGG CGTGGCGCGCCGCGG TTTCGCGGGAAAGGA galE2 491936 - 490866 - | UDP-glucose 4-epimerase BAD_0392 492044 - 492928 + | tRNA (guanine-N(7)-)-methyltransferase TERM 526 493350 - 493367 + F 100 -9.1 -5.35224 | opp_overlap 493350 GAGCCACCAGATACA CCCCGGA GCAA TCTGGGG TTTTGTTTTTCTCGC BAD_0393 493590 - 495755 + | nucleoside-diphosphate-sugar epimerase BAD_0394 495755 - 496672 + | hypothetical protein BAD_0395 496741 - 498540 + | hypothetical protein BAD_0396 498537 - 499955 + | glycosyltransferase I BAD_0397 499957 - 501435 + | hypothetical protein TERM 527 501670 - 501646 - g 74 -4.1 -4.76213 | overlap 501647 501648 AGAAAGTCAAGAAAA GCGCCACGCAG GGG CTTGACGGCGC GCATCTGCGTGACAA TERM 528 501922 - 501912 - g 73 -4.6 -4.59773 | overlap 501913 GGCTACGGTGAAAAA GCGC CGA ACGC CACCGTGCAGGTGCG TERM 529 502232 - 502216 - g 89 -10.1 -4.66318 | AGCAGCTCAACAAAA GCGCGCT CCA AGCGCAC GGCCTCGACAAGAAC cotH 501453 - 503279 + | spore coat protein H BAD_0399 503269 - 504099 + | hypothetical protein vrrB 504767 - 504063 - | hypothetical protein BAD_0401 505746 - 504853 - | hypothetical protein BAD_0402 507114 - 506242 - | putative 200 kDa antigen p200 TERM 530 506852 - 506840 - G 78 -2.7 -5.03314 | GCTATGTGCAAAAAA TGCTT GAC AAACA TGGCGGTTCCTTCCA TERM 531 507114 - 507133 + H 74 -7.8 -4.14874 | overlap 507115 507130 ATAGGATTTCGGGCA TCGGACGG CATG CTGTCCGG TTTTGCCGGTGTTGT TERM 532 507220 - 507244 + H 74 -11.4 -3.17075 | opp_overlap 507215 507216 TATGATGAAACCGTT GGCCGCGGCA ATGGA TGCCGTGGTC TTCGCTTGAACACAC fucO 507281 - 508432 + | L-1,2-propanediol oxidoreductase TERM 533 508515 - 508482 - T 100 -16.7 -5.27023 | opp_overlap 508482 ATCGTAAAAACAAAA CGGACGGCATCGATC GCAT GGTCGGTGCCGTCCG TTCGCTATCCGCGGA TERM 534 508482 - 508515 + T 100 -21.1 -3.12351 | opp_overlap 508482 ATCGTAAAAACAAAA CGGACGGCATCGATC GCAT GGTCGGTGCCGTCCG TTCGCTATCCGCGGA BAD_0404 509490 - 508564 - | glycosyltransferase BAD_0405 509545 - 511068 + | hypothetical protein TERM 535 511443 - 511466 + G 88 -7.4 -4.88228 | gap 1, opp_overlap 511436 CAGATGAACGAGTCG GGCG-CATCCG ACC CGTATGACGCC TTTTTCGTGTTCGAT BAD_0406 511068 - 512291 + | hypothetical protein BAD_0407 512324 - 513835 + | hypothetical protein hprT 513907 - 514479 + | hypoxanthine-guanine phosphoribosyltransferase TERM 536 516138 - 516122 - g 72 -12.3 -3.03124 | CCGTACCGCCGAAGA GGTCGTG TTC CACGACC CGACCACCGGCGCGT BAD_0409 514476 - 516575 + | hypothetical protein TERM 537 516639 - 516613 - g 93 -17.3 -3.40403 | gap 1 CCTCCTCGACGACAA GGCCCGTGCCGC TCAT GCGGC-CGGGCC TGTCGGCTATGACGA folE 516575 - 517210 + | GTP cyclohydrolase I TERM 538 518127 - 518105 - g 76 -9.1 -4.08945 | gap 1 ATGACGTGGCGAAAA GCCG-CGACG CGGT CGCCGTCGGC AACGCATGGCGCGAG folP 517258 - 518157 + | dihydropteroate synthase 1 TERM 539 518894 - 518926 + G 76 -14.7 -2.64803 | opp_overlap 518881, overlap 518892 AAGCCTCACATGGTC GCGTGCGCACCGACC ATT GGACGTCGCGCACGC TCGATTTGGACATCA TERM 540 519299 - 519283 - g 74 -11.5 -3.53091 | overlap 519269 519286 ACGGCGGCCTCCAAA GCAGCCG CTG CGGCCGC GGCGAAACCGGGACC sulD 518242 - 519792 + | aldolase-pyrophosphokinase TERM 541 520304 - 520277 - g 100 -19.2 -4.56597 | overlap 520261 TCCGGCCGTGAAAAA GGCCGCACAGCG CAAT CGCTATGCGGCC GCCGCCACGAAGGCG BAD_0413 519855 - 520364 + | hypothetical protein TERM 542 520355 - 520377 + T 70 -9.2 -3.67792 | opp_overlap 520359, overlap 520358 TCCTGCCACGAAATC GAAAGTCTGA ACG TCAGACCTTC TTTAACTCCGTCTCA TERM 543 520373 - 520359 - T 71 -8.6 -3.87149 | opp_overlap 520358 520355 GCCACGAAATCGAAA GTCTGA ACG TCAGAC CTTCTTTAACTCCGT tesB 521295 - 520390 - | Acyl-CoA thioesterase II TERM 544 521444 - 521472 + r 76 -10.9 -3.75665 | opp_overlap 521444 TTGACGTATGGCAAA GCGCCACCGCTCG TAA TGAAGGGTGGCGC TTTGCTGAAATCTGC TERM 545 521472 - 521444 - R 81 -12.4 -3.61178 | opp_overlap 521444 TTGACGTATGGCAAA GCGCCACCGCTC GTAAT GAAGGGTGGCGC TTTGCTGAAATCTGC BAD_0415 523175 - 521520 - | putative ABC transporter ATP-binding protein TERM 546 523220 - 523235 + G 71 -6.8 -4.26188 | opp_overlap 523220 TCCATCCTTAAGAAA CGTTGG AATT CCAGCG TTTTGCGTATGTCGG TERM 547 523625 - 523682 + G 93 -11.5 -4.29829 | gap 2, opp_overlap 523664 523665, overlap 523626 CGGTGAAATCGGGTT TTCGCGTACGG-GGTATG-TTTCGACC GTTTGA GGGCGAAATCGTACCTCCGTACGTGAC TTTGTTGATGATTCT TERM 548 523626 - 523681 + G 82 -15 -3.16813 | gap 2, opp_overlap 523664 523665, overlap 523625 GGTGAAATCGGGTTT TCGCGTACGG-GGTATG-TTTCGACC GTTTGA GGGCGAAATCGTACCTCCGTACGTGA CTTTGTTGATGATTC BAD_0416 523176 - 523655 + | hypothetical protein cpxR 523898 - 524215 + | two component system response regulatory protein ribD 524261 - 525214 + | riboflavin biosynthesis protein RibD TERM 549 525280 - 525314 + T 78 -12.3 -3.16564 | opp_overlap 525280 525289 TGAATTTTGCGAAGA GGTCTTAAAGGGTGT AAATC ATACCCTCTAAGACC TTAATGACGTAGAGG TERM 550 525314 - 525280 - T 81 -13 -3.03159 | opp_overlap 525280, overlap 525289 TGAATTTTGCGAAGA GGTCTTAAAGGGTGTA AAT CATACCCTCTAAGACC TTAATGACGTAGAGG BAD_0419 526928 - 525381 - | hypothetical protein BAD_0420 527106 - 528032 + | hypothetical protein TERM 551 528162 - 528128 - T 95 -8.6 -4.94992 | TGAAATCCACAAAAA GGCCTTAAGAGGTA TGAATAT TACCCCCTAGGGCC TTAGCGATTCAAGAA TERM 552 528221 - 528247 + T 76 -9.5 -3.87994 | opp_overlap 528221 GGTCGGGTGAAGAAA TCCGCCATC CATAAGCGA GATGGCGGA TTTCTGCGGCTCACT TERM 553 528247 - 528221 - T 86 -10.2 -4.15044 | opp_overlap 528221 GGTCGGGTGAAGAAA TCCGCCATCC ATAAGCG AGATGGCGGA TTTCTGCGGCTCACT BAD_0421 529538 - 528258 - | O-acetylhomoserine (thiol)-lyase xylA 529775 - 531124 + | xylose isomerase TERM 554 531313 - 531354 + F 71 -9.6 -3.58884 | overlap 531313 531317 GACTGTGACAGAGCC GGATGTGGTGTGCC-GAACG TCGG TGTTCCGGCACACCAC-TCA CTTTTCTTTCCTTCC TERM 555 531313 - 531355 + F 100 -9.4 -5.00851 | gap 3, overlap 531313 531317 GACTGTGACAGAGCC G-GATGTGGTGTGCC-GAACG TCGG TGTTCCGGCACACCAC-TCAC TTTTCTTTCCTTCCT TERM 556 531317 - 531351 + F 87 -15.9 -2.8949 | gap 1, overlap 531313 531313 GTGACAGAGCCGGAT GTGGTGTGCC-GAACG TCGG TGTTCCGGCACACCAC TCACTTTTCTTTCCT TERM 557 531389 - 531438 + F 100 -26.6 -3.61398 | TCCTCAAATTTCCTT CGCACGCAAGTCGTTTGCCGGC TAGATC GCCGGTGAGCGGCTTGCGTGCG TTGTTAGACCAAGCG BAD_0423 531514 - 533208 + | alpha-L-arabinofuranosidase BAD_0424 534361 - 533342 - | LacI family transcriptional regulator TERM 558 534170 - 534136 - G 73 -10.2 -3.57561 | opp_overlap 534129 534138, overlap 534138 CTTCAAGGGCCCAAA CATTATCGAAATCTTG GAA CACGATTTCGATAATT CGTTGGCTTTTCGCG TERM 559 534168 - 534138 - G 76 -12.8 -3.36569 | opp_overlap 534129 534138, overlap 534136 TCAAGGGCCCAAACA TTATCGAAATCTTG GAA CACGATTTCGATAA TTCGTTGGCTTTTCG TERM 560 534138 - 534168 + g 79 -12.8 -3.45404 | opp_overlap 534138 534136, overlap 534129 TCAAGGGCCCAAACA TTATCGAAATCTTG GAA CACGATTTCGATAA TTCGTTGGCTTTTCG TERM 561 534398 - 534421 + H 78 -6.8 -4.60924 | gap 1, opp_overlap 534398 534390 CATCATATCCGAAAA CGCGAA-CGAA AGT TTCGGTTTGCG TTTTTCGAAACTTTC TERM 562 534475 - 534460 - H 74 -4.7 -4.74706 | overlap 534462 GGCAATACTTAAAAA CGTTG TAAAAT CAACG AAAAATAATTAGTTT BAD_0425 534698 - 535993 + | putative sugar transporter solute-binding protein BAD_0426 536010 - 537137 + | putative binding protein-dependent transporter BAD_0427 537137 - 538030 + | putative binding protein-dependent transporter TERM 563 538049 - 538080 + F 88 -13.8 -3.40191 | opp_overlap 538044 538048 538045, overlap 538053 AATGTGACAATCCAC GCCCGGAAGATG TTCCTTTC CGTCTTCCGGGC TTCATCTCTTATGCA TERM 564 538122 - 538135 + G 75 -8.1 -4.26076 | ATGAAGATTTCCAAC CCGGT GCTC ACCGG TTTTCATGCCGATCC xynB 538107 - 539738 + | beta-1,4-xylosidase TERM 565 539789 - 539732 - f 95 -14.1 -3.29144 | gap 1, overlap 539742 GGAGCTTTCCGATAA CCAGTAGACAGTGCCGGCTGGCGACAGA GCG TCCGTCGTCAGCCGGCATACTCGAC-GG CATTGAAATCTATGG TERM 566 539780 - 539742 - f 100 -19.6 -2.98729 | overlap 539732 GATAACCAGTAGACA GTGCCGGCTGGCGACAGA GCG TCCGTCGTCAGCCGGCAT ACTCGACGGCATTGA TERM 567 539987 - 540021 + G 82 -13 -3.58269 | gap 1, overlap 540010 GGCTCATGGAGCGTG TCGTACGGTCCGATC ACAGCA GG-CGGACCGTACGA TTTGACGGTGCGTTA TERM 568 541403 - 541371 - g 78 -4.9 -4.81212 | gap 1, opp_overlap 541371 CTCATGATAAGAAAA CCATCGCG-GATCG TGCATT CAATGTCGCGATGG ATTTTGTGTATGGCC BAD_0429 539792 - 541771 + | putative secreted protein BAD_0430 541811 - 543211 + | putative esterase TERM 569 543434 - 543449 + G 71 -5.4 -4.41616 | gap 1, opp_overlap 543414 TCTTCTTCGATGATC CGG-ACG AGG CGTACCG TTTGTTTCACGAGCT BAD_0431 543244 - 543903 + | maltose O-acetyltransferase TERM 570 544033 - 544089 + T 100 -20.5 -3.17212 | gap 3, opp_overlap 544034 544037, overlap 544034 544036 544040 544078 GAGTATGGTTCATGA ATCA-GCATAGGGCCGGGAAGC--CCCA TTGT TGGGAAGCTTCCCGGCCCTATGCCTGAA TTCCTGCGGTGATGG TERM 571 544088 - 544034 - T 100 -24 -3.1505 | gap 3, opp_overlap 544034 544033 544036 544040 544078, overlap 544037 AGTATGGTTCATGAA TCA-GCATAGGGCCGGGAAGC--CCCA TTGT TGGGAAGCTTCCCGGCCCTATGCCTGA ATTCCTGCGGTGATG TERM 572 544034 - 544088 + T 100 -24 -2.50113 | gap 3, opp_overlap 544034 544037, overlap 544033 544036 544040 544078 AGTATGGTTCATGAA TCA-GCATAGGGCCGGGAAGC--CCCA TTGT TGGGAAGCTTCCCGGCCCTATGCCTGA ATTCCTGCGGTGATG TERM 573 544036 - 544085 + T 100 -22.4 -2.56914 | gap 2, opp_overlap 544034 544037, overlap 544034 544033 544040 544078 TATGGTTCATGAATC AGCATAGGGCCGGGAAGC--CCCA TTGT TGGGAAGCTTCCCGGCCCTATGCC TGAATTCCTGCGGTG TERM 574 544084 - 544037 - T 100 -25.9 -2.78018 | gap 2, opp_overlap 544036 544034 544033 544040 544078, overlap 544034 ATGGTTCATGAATCA GCATAGGGCCGGGAAGC--CCCA TTGT TGGGAAGCTTCCCGGCCCTATGC CTGAATTCCTGCGGT xylB 545626 - 544106 - | xylulose kinase TERM 575 545446 - 545468 + g 76 -14.1 -3.06162 | CGGATACGTCGTCCA GGCCGCCGG CCTGC TCGGCGGCC TCTTGGAATGCGCTC TERM 576 545652 - 545672 + H 83 -12.5 -3.2827 | GCCTCCTTGCATGTG CCGTTCGCC GGT GGCGCACGG TTAATAGTTAGATGA BAD_0433 545796 - 547028 + | XylR-type repressor ggtA 547317 - 547709 + | gamma-glutamyltranspeptidase BAD_0435 548255 - 549241 + | beta-galactosidase TERM 577 549777 - 549789 + G 78 -6.9 -4.65895 | overlap 549765 CATCGACACCGGCAT CGGCG GCG CGCTG TTTTTGGGTGGCGGG BAD_0436 549364 - 550275 + | transcriptional regulator BAD_0437 551059 - 550253 - | TetR-type transcriptional regulator TERM 578 550672 - 550712 + g 74 -11.8 -3.44051 | opp_overlap 550672 550668 550673, overlap 550673 GGGGGTAGAAATACA CGCGATGACCGTCGTTGT CGGTC ACGGCGGCGGTCACCGCA TTGTACTCGTCGGCG TERM 579 550700 - 550672 - G 72 -10.9 -3.3353 | opp_overlap 550672 550673, overlap 550668 550673 GGGGGTAGAAATACA CGCGATGACCGTC GTT GTCGGTCACGGCG GCGGTCACCGCATTG TERM 580 550673 - 550711 + g 76 -15.3 -2.66216 | opp_overlap 550672 550673 550668, overlap 550672 GGGGTAGAAATACAC GCGATGACCGTCGTTGT CGGTC ACGGCGGCGGTCACCGC ATTGTACTCGTCGGC BAD_0438 551989 - 551156 - | xylan esterase TERM 581 551675 - 551642 - G 71 -8.1 -4.08767 | gap 1 GCCACCGGCGGAAAA GC-CGATGACGGCGAT TCG ATCGCCGTCGACATGC CATTCGGCGGCGTGC TERM 582 552077 - 552110 + r 100 -18.1 -3.62096 | opp_overlap 552077 GGGGGGTATTGGAAA CGGGCGGCCGCGAAA ATGC TTCCACGGCCGCCCG TTTCCAATACTCGGA TERM 583 552110 - 552077 - R 100 -22.5 -3.59979 | opp_overlap 552077 GGGGGGTATTGGAAA CGGGCGGCCGCGAAA ATGC TTCCACGGCCGCCCG TTTCCAATACTCGGA BAD_0439 552897 - 552313 - | cellobiose-phosphorylase TERM 584 553175 - 553198 + H 100 -16 -3.70902 | AGCGAGGGCACATGC GGACCTGCCG GAAG CGGCGGGTCC TTTGCATATCCGCGG rpmE 553351 - 553563 + | 50S ribosomal protein L31 TERM 585 553611 - 553588 - f 95 -12.4 -4.43477 | opp_overlap 553588 CTTAGGCAATGAAAA CGCCAGTCCA TTCG TGGGCTGGCG TTTTTCGTTACCGAC TERM 586 553588 - 553611 + F 100 -14.6 -4.8622 | opp_overlap 553588 CTTAGGCAATGAAAA CGCCAGTCCA TTCG TGGGCTGGCG TTTTTCGTTACCGAC prfA 553745 - 554833 + | peptide chain release factor 1 TERM 587 555343 - 555315 - g 87 -10.1 -4.36914 | GGGCCGTCGAGAAAA GCGCTACGACCGC CGA GTGGACGTGGCGC AACCTCGACGAGACC BAD_0442 554843 - 555763 + | methylase protein BAD_0443 555904 - 557205 + | solute binding protein of ABC transporter for branched-chain amino acids TERM 588 557239 - 557268 + F 74 -9.9 -3.63627 | opp_overlap 557240, overlap 557240 CCTGAATCTGTGAAG AGGAGGGGGCCGG GAAA CCGGTTCTCTCCC TTTCGCGTATCAAGA TERM 589 557240 - 557267 + F 79 -13.4 -2.77962 | opp_overlap 557240, overlap 557239 CTGAATCTGTGAAGA GGAGGGGGCCGG GAAA CCGGTTCTCTCC CTTTCGCGTATCAAG BAD_0444 557338 - 558306 + | permease of ABC transporter for branched-chain amino acids BAD_0445 558311 - 559432 + | permease of ABC transporter for branched-chain amino acids BAD_0446 559429 - 560241 + | ATP binding protein of ABC transporter for branched-chain amino acids BAD_0447 560241 - 560945 + | ATP binding protein of ABC transporter for branched-chain amino acids TERM 590 560960 - 560995 + F 100 -18.4 -5.03994 | overlap 560951 ATTCATGCCGTATCC GCCTTGTCGGCTTGGA CGCA TCCAAACCGACAGGGC TTTTTCTATATCCGA BAD_0448 561103 - 561765 + | Sua5/YciO/YrdC family protein rfe 561762 - 562940 + | undecaprenyl-phosphate alpha-N-acetylglucosaminyltransferase guaB 563078 - 564622 + | inosine-5'-monophosphate dehydrogenase TERM 591 564670 - 564719 + T 100 -20.1 -4.09511 | opp_overlap 564672 564674 564679, overlap 564671 564674 564679 GACTAAACGCTAGAT AATACGAAACCCGTCCGGTGGCA GGAA TGCCGCTGGACGGGTTTCGTGCG TTTTCGGCAGCTATT TERM 592 564671 - 564718 + T 100 -23.6 -3.05224 | opp_overlap 564672 564674 564679, overlap 564670 564674 564679 ACTAAACGCTAGATA ATACGAAACCCGTCCGGTGGCA GGAA TGCCGCTGGACGGGTTTCGTGC GTTTTCGGCAGCTAT TERM 593 564717 - 564672 - T 100 -20.5 -3.5365 | opp_overlap 564671 564670 564674 564679, overlap 564674 564679 CTAAACGCTAGATAA TACGAAACCCGTCCGGTGGCA GGAA TGCCGCTGGACGGGTTTCGTG CGTTTTCGGCAGCTA TERM 594 564674 - 564715 + T 100 -27.5 -2.74605 | opp_overlap 564672 564674 564679, overlap 564671 564670 564679 AAACGCTAGATAATA CGAAACCCGTCCGGTGGCA GGAA TGCCGCTGGACGGGTTTCG TGCGTTTTCGGCAGC TERM 595 564715 - 564674 - T 100 -23.1 -3.33814 | opp_overlap 564674 564671 564670 564679, overlap 564672 564679 AAACGCTAGATAATA CGAAACCCGTCCGGTGGCA GGAA TGCCGCTGGACGGGTTTCG TGCGTTTTCGGCAGC TERM 596 564710 - 564679 - T 100 -15.8 -3.99275 | opp_overlap 564674 564671 564670 564679, overlap 564674 564672 CTAGATAATACGAAA CCCGTCCGGTGGCA GGAA TGCCGCTGGACGGG TTTCGTGCGTTTTCG TERM 597 564679 - 564710 + T 100 -20.2 -3.84284 | opp_overlap 564679 564674 564672, overlap 564674 564671 564670 CTAGATAATACGAAA CCCGTCCGGTGGCA GGAA TGCCGCTGGACGGG TTTCGTGCGTTTTCG BAD_0451 565820 - 564786 - | LacI-type transcriptional regulator aglA 566137 - 567909 + | alpha-1,4-glucosidase TERM 598 567995 - 568028 + F 100 -18.9 -4.00532 | CGGCAGCGCGCTCCA GCCGTCCGCGTCC CTCCATTT GGGCGCGGACGGC TTTCCTGTTTCCAAC orn 568148 - 568801 + | oligoribonuclease BAD_0454 568829 - 569728 + | hypothetical protein TERM 599 570149 - 570179 + G 85 -5.3 -5.03314 | overlap 570123 GCGACGAACGTCCGT TCGGCGGGCTGCA GGTGG TGTTGTCCGGCGA TTTTTTCCAGCTGCC BAD_0455 569773 - 571185 + | helicase TERM 600 572536 - 572519 - g 80 -10.5 -4.13767 | GCCGGCAGCCGAAAA GCGCCCG ACCC CGGACGC GGCCACCATCGACAA TERM 601 572670 - 572627 - g 82 -12.4 -3.64487 | overlap 572661 572663 572666 CGACATTCTGAAGAA CGTCGTCATCGCCGTCATGC ATCC GCAGGACGAAGACCACGACG AGCCGTGGCGCGAGC proS 571767 - 573584 + | prolyl-tRNA synthetase TERM 602 573637 - 573665 + F 100 -15.4 -5.95286 | opp_overlap 573642 AACGACATACGGCAA CGGAAGACCATC AAGCA GGTGGTCTTCCG TTTTTTGTTTTTCAT TERM 603 573765 - 573712 - f 81 -14.1 -2.64735 | gap 1 ATCTCACGCACATGA GGATTGTGGA-TGTCGGTGGATAAGT CGA AATTATCCACCGACAATCCACGACTC GCCCGACGATCTCAA TERM 604 574228 - 574200 - g 83 -5.1 -5.03145 | overlap 574201 CAATCGTTCAAAAAA GGCGAACCGGTCA TCG TGACCGGCGTGCT GGCGGCGGAAAGCTG TERM 605 574507 - 574550 + G 72 -11.7 -3.3344 | gap 1, opp_overlap 574482 574511, overlap 574510 AGGCCGGTACGGATA G-CAACGCCGCCGAACCCCT ACGTG AGGAATTCGGCGGCGATGGC TTCTGACGATTGCCT TERM 606 574545 - 574511 - g 100 -20.1 -3.2794 | opp_overlap 574510 574507, overlap 574482 CGGTACGGATAGCAA CGCCGCCGAACCCCT ACGTG AGGAATTCGGCGGCG ATGGCTTCTGACGAT BAD_0457 573978 - 574556 + | hypothetical protein pepO 576685 - 574595 - | M13 family peptidase TERM 607 575919 - 575903 - G 81 -13.7 -3.27525 | overlap 575886 575898 GCCGCGGAAATCCAA CGGCTGC ACG GCAGCCG CGGTGGTCGCGTCGT TERM 608 576784 - 576768 - H 70 -6.5 -4.2074 | GGTGGAATACAGAAA GGAGAAC ATC GTTCGCC GGTGTATGGCCCGCG TERM 609 577071 - 577055 - g 73 -13.7 -2.71144 | opp_overlap 577055 CACGTCCGTGAACGA CGCCGTG CTG CACGGCG TTCCGTACGACTACA TERM 610 577055 - 577071 + G 76 -13.7 -3.06183 | opp_overlap 577055 CACGTCCGTGAACGA CGCCGTG CTG CACGGCG TTCCGTACGACTACA TERM 611 577582 - 577559 - g 71 -7.4 -4.21194 | gap 1 CGCCATCACCGAAAA CGGTCCGGTGA TCC TCACC-GTCCG CGACTAGTCCAAAAC map 576816 - 577589 + | methionine aminopeptidase TERM 612 577634 - 577608 - f 100 -14.5 -4.30034 | gap 1, opp_overlap 577608 AAAACCTTATGAAAA CGGGCTTGTGCG ATTA CGCAC-AGCCCG TTTTTTCATGCCCGT TERM 613 577608 - 577634 + F 100 -14.5 -5.14965 | gap 1, opp_overlap 577608 AAAACCTTATGAAAA CGGGCTTGTGCG ATTA CGCAC-AGCCCG TTTTTTCATGCCCGT gltA2 577730 - 579025 + | citrate synthase 1 BAD_0461 579167 - 580159 + | hypothetical protein TERM 614 580195 - 580163 - f 70 -5.6 -4.37734 | gap 2, overlap 580168 CACAAGAACTGAAAA CGGAATG-GCGGA-GA GCG TCATCCGCGCTCTCCG CAAGAGGAAACTCGT TERM 615 580198 - 580168 - g 76 -12.6 -3.39352 | overlap 580163 GAACTGAAAACGGAA TGGCGGAGAGCG TCATCCG CGCTCTCCGCAA GAGGAAACTCGTGAA TERM 616 580430 - 580383 - g 82 -12.1 -3.6869 | opp_overlap 580392, overlap 580386 CAGATCAAGGCCAAA GAGGGCGAACGCATCGCCA AACATATTCG TGACGATGCGTTCGTCATC GCCCTCGCCATCGAA BAD_0462 580167 - 580688 + | hypothetical protein TERM 617 581404 - 581382 - g 71 -7 -4.26079 | CGAAAGCATCCAAAA GGATCTCGAC GAT ATGGAGATCC AGACGCTGCTTGACG prfB 581062 - 582192 + | peptide chain release factor 2 TERM 618 582421 - 582451 + G 72 -11.1 -3.28791 | opp_overlap 582419 TCGCCGGCAACGATC TGCGACGCCTGTC CGCAC GGCAGGTGCCGCA TTATCGCCGGCAGAT ftsE 582216 - 583454 + | FtsE-like ATP binding protein in cell division ftsX 583451 - 584377 + | FtsX-like protein in cell division TERM 619 584388 - 584408 + G 70 -10.5 -3.44321 | overlap 584386 CATAAACCGGCGGAG TGCTGAACG AGA TGTTCAGCA TATTTGAAGTTTGCT TERM 620 584736 - 584701 - g 70 -9.8 -3.51825 | gap 1, overlap 584702 584704 CGATTTGAACGACAA CCAGATTCCTGCGGC GGTCGAG GCCGC-GGAATCTGC CCAGCAGGCGGCAGA TERM 621 584735 - 584702 - g 73 -13.3 -2.70774 | gap 1, overlap 584701 584704 GATTTGAACGACAAC CAGATTCCTGCGGC GGTCGAG GCCGC-GGAATCTG CCCAGCAGGCGGCAG TERM 622 584906 - 584928 + G 82 -9.2 -4.386 | GAAAGCTTCCACGGC TCCAGTACGT CGG ATGTGCTGGA TTTTGTCACCGATTC TERM 623 585539 - 585517 - g 70 -9.8 -3.51924 | overlap 585520 CTGCTACGGACACAA CACCGGCAAC ACG GTCGGCGGTG CCGCGTATCCGTCCC BAD_0466 584387 - 585889 + | hypothetical protein TERM 624 585958 - 585912 - f 90 -13 -3.88498 | gap 1, opp_overlap 585921 585946, overlap 585913 GTTCCAGACATGAAA CCACGGCAAGCGCGCCGTCCG CATCGT CGGGCGACGCGCTTTC-GTGA TATGGTCGACGGAGT TERM 625 585957 - 585913 - f 86 -14.3 -2.92777 | gap 1, opp_overlap 585921 585946, overlap 585912 TTCCAGACATGAAAC CACGGCAAGCGCGCCGTCCG CATCGT CGGGCGACGCGCTTTC-GTG ATATGGTCGACGGAG TERM 626 585921 - 585950 + F 100 -14.2 -3.82665 | opp_overlap 585913 585912, overlap 585946 ATGAAACCACGGCAA GCGCGCCGTCCG CATCGT CGGGCGACGCGC TTTCGTGATATGGTC smpB 586018 - 586497 + | SsrA-binding protein TERM 627 587184 - 587163 - g 73 -10.1 -3.61398 | TCTGTGCGGCAAGAA GGTGGCCGT GCAG ACCGCCACC ATGCAGGAGACCGCC BAD_0468 586624 - 587571 + | ABC transporter solute-binding protein BAD_0469 587682 - 588617 + | ABC transporter solute-binding protein TERM 628 588638 - 588678 + F 100 -19.1 -4.62471 | GCACTGACGCTGCGG GCGTAGGGGCATCGGAC GTATATA GATCGATGCCCCTACGC TTTTTGCCGATTAAC BAD_0470 588667 - 589734 + | ABC transporter solute-binding protein BAD_0471 589769 - 590752 + | permease protein of ABC transporter system BAD_0472 590749 - 591558 + | ATP binding protein of ABC transporter TERM 629 591588 - 591633 + F 100 -12 -5.26119 | opp_overlap 591587 GTACTGCCGTAAATT CCCAATCCACT-GACGTCAAGC GTCC GCA-GACGTCCGGTGGGTTGGG TTTTCTTTTTGCCGC TERM 630 591861 - 591839 - g 70 -9.9 -3.53091 | gap 1, opp_overlap 591840 591855, overlap 591840 ACCGCGTGCGGCAAA CCCTTGGAGG TCTG CCTCC-AGGG TCTTCAGCGATTGGA TERM 631 591840 - 591861 + G 72 -12.3 -3.04322 | opp_overlap 591839 591840, overlap 591855 CCGCGTGCGGCAAAC CCTTGGAGG TCTG CCTCCAGGG TCTTCAGCGATTGGA glmS 591788 - 593680 + | D-fructose-6-phosphate amidotransferase TERM 632 593736 - 593712 - f 72 -11.6 -3.14344 | opp_overlap 593712 593732 TACGTGCTCGAGGAA CCTCATATTC CCTTC GAATATGAGG TTCTGTACGAGGACG TERM 633 593712 - 593736 + F 77 -11.6 -3.48276 | opp_overlap 593712, overlap 593732 TACGTGCTCGAGGAA CCTCATATTC CCTTC GAATATGAGG TTCTGTACGAGGACG BAD_0474 593739 - 594425 + | pseudouridine synthase BAD_0475 594534 - 595826 + | serine/threonine transporter SstT TERM 634 595867 - 595894 + F 95 -14.2 -3.65314 | opp_overlap 595867, overlap 595859 595885 CGATATCGCAGGGAA CCGCTTTGGAAG TTCG CTTCCGGAGCGG TTCTTCCGCATTCGG TERM 635 596572 - 596551 - g 85 -7.3 -4.79075 | gap 1, overlap 596566 AAAAACTCAAGAAAA TCGGCGTGTA CAT CAC-CGCCGA TTCCGGCGACGCCAG TERM 636 597165 - 597143 - g 71 -9 -3.71284 | CGGGCAGGAATACAA CCGCGTGCTG TCC CAGGCCGCGG AGAACGTGTCGACCG BAD_0476 596016 - 597449 + | sugar ABC transporter solute-binding protein TERM 637 597474 - 597512 + T 100 -14.7 -4.19238 | gap 1, opp_overlap 597474, overlap 597475 597477 AATTGGTTTAATCGA TTG-CGGCCTGCGGATAG CGCA TTATCCGCAGGCCGTCGG TTTTCAGATTGCCGG TERM 638 597475 - 597511 + T 93 -16 -3.11222 | gap 1, opp_overlap 597474, overlap 597474 597477 ATTGGTTTAATCGAT TG-CGGCCTGCGGATAG CGCA TTATCCGCAGGCCGTCG GTTTTCAGATTGCCG TERM 639 597477 - 597508 + T 100 -21 -2.76291 | opp_overlap 597474, overlap 597475 597474 TGGTTTAATCGATTG CGGCCTGCGGATAG CGCA TTATCCGCAGGCCG TCGGTTTTCAGATTG BAD_0477 598333 - 597563 - | pantothenate kinase BAD_0478 599603 - 598425 - | phosphopantothenoylcysteine decarboxylase TERM 640 600622 - 600604 - g 75 -8.1 -4.2361 | AATACAACGCGAAAA CCGAAGC GGTCG GCTCCGG CCCGTATACCGTCGA BAD_0479 599907 - 601562 + | solute binding protein of ABC transporter systemy for peptides BAD_0480 601578 - 602558 + | peptide ABC transporter permease TERM 641 603180 - 603224 + G 78 -14.2 -3.25102 | overlap 603179 GGTCGGGGGCAAGCT CCGTCCGCGTGTTCTTCACG CATAT CGTGCCGAACACGCTGCCGG TATTGTGCGTGCAGT BAD_0481 602636 - 603493 + | peptide ABC transporter permease oppD 603490 - 604320 + | peptide ABC transporter ATP-binding protein oppF 604334 - 605089 + | peptide ABC transporter ATP-binding protein TERM 642 605895 - 605872 - g 100 -8.8 -5.00616 | GCCTGCCTGAAAAAA CACGGCATCG TGGA CGACTCCGTG ACCGCCGACGCCTAC BAD_0484 605287 - 606042 + | hypothetical protein BAD_0485 606027 - 607208 + | hypothetical protein BAD_0486 607205 - 607870 + | ABC transporter BAD_0487 607867 - 609015 + | hypothetical protein TERM 643 609128 - 609142 + F 73 -5 -4.56597 | AGGCGGCTGGAGGCG TCGGAT GCG ATTCGA TTTTTCGGGAACGAC TERM 644 609894 - 609917 + G 74 -11.7 -3.53012 | overlap 609889 609898 609900 CCACCGGTCAGCGTG GCGCGGCGA AGCTGG TTGCCGCGC TTTGCGCGCCGACCG BAD_0488 609455 - 610363 + | ABC transporter ytfF 610360 - 611307 + | hypothetical protein cbsSV 611548 - 612684 + | cystathionine beta-synthase metB 612700 - 613968 + | cystathionine gamma-synthase TERM 645 614032 - 613992 - f 100 -19.7 -2.88822 | opp_overlap 613997, overlap 613997 TTTCCGATAGAAGCA TGAAACGGCCGGCATGGGC AAG ACCCGCGCCGGCCGTTTCG CTCTCCGCGGTCAAC TERM 646 614027 - 613997 - f 100 -18.2 -3.88015 | opp_overlap 613997, overlap 613992 GATAGAAGCATGAAA CGGCCGGCATGGGC AAG ACCCGCGCCGGCCG TTTCGCTCTCCGCGG TERM 647 613997 - 614027 + F 100 -17.5 -3.70902 | opp_overlap 613997 613992 GATAGAAGCATGAAA CGGCCGGCATGGG CAAGA CCCGCGCCGGCCG TTTCGCTCTCCGCGG recQ 614005 - 616029 + | ATP-dependent DNA helicase RecQ BAD_0493 616124 - 616609 + | S-ribosylhomocysteinase BAD_0494 616687 - 617223 + | hypothetical protein TERM 648 617252 - 617283 + T 100 -21 -4.2349 | opp_overlap 617252 GAAACGTAGAAAAAA GGACGTCTCCCGTA AAAC TGCGGGAGACGTCC TTTTCCATATGAAGG TERM 649 617283 - 617252 - T 100 -18.8 -5.33866 | opp_overlap 617252 GAAACGTAGAAAAAA GGACGTCTCCCGTA AAAC TGCGGGAGACGTCC TTTTCCATATGAAGG yfnA 618731 - 617304 - | amino acid transporter TERM 650 618065 - 618029 - G 93 -15.2 -3.8372 | gap 1 AGCTGAAGAACACAA TCGACGCGGCCGGCACG ATGC CGTAC-GGCTGCGTCGA ACCCGGCTGGAACGT TERM 651 618847 - 618823 - H 70 -7 -4.17701 | opp_overlap 618823 GCCAGAAATCAGAAA GGCCGCGGCG ATATG CGCAACAGCC TTGTGTATGGAAAGT alr 618966 - 620324 + | alanine racemase TERM 652 620352 - 620336 - f 100 -15.1 -4.59853 | GTAATCCCGTAAAAA GCGGCGG CAG CCGCCGC ACCCATAGGAAGGCG TERM 653 621118 - 621084 - g 76 -10.7 -3.72576 | gap 1 GCGTGCTGCATGAAA GCG-GCGTGATCGACG CGGT CGTCGAGGACGCGCGC GCCTGGTACGGACCG BAD_0497 620375 - 621634 + | deoxyguanosinetriphosphate triphosphohydrolase-like protein TERM 654 621712 - 621693 - g 85 -9.2 -4.68124 | opp_overlap 621693 GGAAGACATAGAAAA GGTCCGCG CCAC CGCCGACC TGTATGACATCGTAT TERM 655 622803 - 622780 - g 71 -8.8 -3.72893 | gap 1, overlap 622791 GATCTGCGCATCAAA CGCG-GCAACG AGG CGGTGCGCGCG CTGATCGCCAATGCG dnaG 621658 - 623745 + | DNA primase BAD_0499 624041 - 625234 + | transport protein TERM 656 625314 - 625339 + F 100 -12.7 -4.46854 | opp_overlap 625314 GGGATTGCATGAAAA CCCTTGGAATC ATTG GATTTCAAGGG TTTATTGTTACGTCG TERM 657 625339 - 625314 - f 90 -10.5 -4.26903 | opp_overlap 625314 GGGATTGCATGAAAA CCCTTGGAATC ATTG GATTTCAAGGG TTTATTGTTACGTCG BAD_0500 625372 - 626412 + | integral membrane protein TERM 658 626547 - 626577 + F 90 -12.5 -3.86283 | opp_overlap 626547 CGGGGTCACCATCAA GCCCTCGCGTCGT TTCAT GCGGTGCGGGGGC TTTCCTGTCCATTGA BAD_0501 626629 - 628617 + | translation elongation factors TERM 659 628667 - 628626 - T 73 -8.7 -3.85509 | gap 1, opp_overlap 628626 628624, overlap 628630 628632 CGAATAGAACCGAAA GACAGACGGGTGGGAAGC GCCGATT GCTTCCCACCCGAG-GCC TGTTGTCGGATACCG TERM 660 628664 - 628630 - T 74 -11.4 -3.31177 | opp_overlap 628626 628624, overlap 628626 628632 TAGAACCGAAAGACA GACGGGTGGGAAGC GCCGATT GCTTCCCACCCGAG GCCTGTTGTCGGATA TERM 661 628662 - 628632 - T 100 -18.4 -3.211 | opp_overlap 628626 628624, overlap 628630 628626 GAACCGAAAGACAGA CGGGTGGGAAGC GCCGATT GCTTCCCACCCG AGGCCTGTTGTCGGA TERM 662 628702 - 628722 + T 83 -12.5 -3.21099 | opp_overlap 628702 ACGGATAAACGAAAA GCCCCACCG AAT CGGTGAGGC TTCATGCTGGAGCGG TERM 663 628722 - 628702 - T 100 -14.7 -4.62475 | opp_overlap 628702 ACGGATAAACGAAAA GCCCCACCG AAT CGGTGAGGC TTCATGCTGGAGCGG BAD_0502 629853 - 629116 - | hypothetical protein BAD_0503 630031 - 630687 + | permease protein of ABC transporter system BAD_0504 630674 - 631348 + | permease of ABC transporter system for amino acids gltL 631341 - 632219 + | ATP binding protein of ABC transporter for glutamate_aspartate TERM 664 632326 - 632296 - g 77 -11 -3.58176 | opp_overlap 632302, overlap 632292 632287 632299 CAACAAGACAATCAA GAGCATCGTGGCCG CAT CGGCCGCGTTGATC ATGGCCGCCTCCGTG TERM 665 632302 - 632320 + G 78 -13.8 -3.21099 | opp_overlap 632299 632296 632292 632287 GACAATCAAGAGCAT CGTGGCCG CAT CGGCCGCG TTGATCATGGCCGCC TERM 666 632402 - 632386 - g 71 -9.3 -3.8512 | GAGCGAGGAGAACAA CGCCTCC AAC GGCGGCG TCACCACGTCCAAGG BAD_0506 632264 - 633169 + | solute-binding protein for glutamate_aspartate ABC transporter system TERM 667 633220 - 633245 + F 100 -16.9 -5.14965 | AATCCTGTTTCCAAG CCTTCCGTGGC ACAC GCCGCGGAAGG TTTTTTCATGCCGAT metC 633498 - 634733 + | cystathionine beta-lyase TERM 668 634777 - 634826 + F 75 -12.1 -2.91582 | opp_overlap 634787 ATTAACTGGCACGCT ATCTCACGAACCGGACAGGGG AAAGCGCC CCTCTGTCCGGCTCGTGGGCG TATGTGGGTCAGCTC TERM 669 634816 - 634787 - f 78 -12.2 -3.16683 | gap 1, opp_overlap 634777 ACGCTATCTCACGAA CCGGACAG-GGGA AAGCG CCCCTCTGTCCGG CTCGTGGGCGTATGT BAD_0508 635013 - 635966 + | hypothetical protein TERM 670 636067 - 636044 - T 75 -6.8 -4.37711 | GCAGGAAAGCGAAAA CGAAAAAAAG AATC CCTTCTTTCG TCGGGGAGCCACGTA BAD_0509 636650 - 636186 - | transposase BAD_0510 636908 - 637639 + | ATP binding protein of ABC transporter BAD_0511 637667 - 638863 + | hypothetical protein BAD_0512 638866 - 640377 + | putative ABC transporter dxs 642398 - 640494 - | 1-deoxy-D-xylulose-5-phosphate synthase badC 642573 - 643574 + | alcohol dehydrogenase TERM 671 643835 - 643792 - g 72 -11.6 -3.29144 | gap 1 TGAGTTCGCGCACAA CGCCCGTGCCAACG-GGCTGA AGG TCATCATCGCCGGCGCGGGCG GCGCGGCCCACCTGC purE 643628 - 644125 + | phosphoribosylaminoimidazole carboxylase catalytic subunit purK 644154 - 645284 + | phosphoribosylaminoimidazole carboxylase ATPase subunit fur 645296 - 645694 + | metal uptake regulator ferric uptake regulator protein TERM 672 645883 - 645864 - f 70 -2.8 -4.75308 | AGCAACATCGAAAAA CGAGCC GATTGAGG AGCTCG ACATCGCTACCGTGG TERM 673 646454 - 646428 - g 76 -13 -3.28712 | TCGCGGCTCCGATAA GCGATCCCGCTC CGT GAACGCGATCGC AAGACTGCTGCTGAT BAD_0518 645904 - 647913 + | hypothetical protein TERM 674 648051 - 648006 - T 83 -12.7 -3.28712 | opp_overlap 648008, overlap 648008 648009 648050 GCGCGCGTCTGAGAA TACGCTAAGGGGCTTGTTCCA ATTA TGGAACAAGCCCCTTAAAACG TTTCACGGCGTCAGC TERM 675 648008 - 648051 + T 85 -12.7 -3.54424 | gap 2, opp_overlap 648006 648008 648009 648050 GCGCGTCTGAGAATA CG--CTAAGGGGCTTGTTCCA ATTA TGGAACAAGCCCCTTAAAACG TTTCACGGCGTCAGC TERM 676 648049 - 648008 - T 100 -17.5 -3.21276 | opp_overlap 648008, overlap 648006 648009 GCGCGTCTGAGAATA CGCTAAGGGGCTTGTTCCA ATTA TGGAACAAGCCCCTTAAAA CGTTTCACGGCGTCA TERM 677 648048 - 648009 - T 100 -18.8 -2.52623 | opp_overlap 648008, overlap 648008 648006 CGCGTCTGAGAATAC GCTAAGGGGCTTGTTCCA ATTA TGGAACAAGCCCCTTAAA ACGTTTCACGGCGTC purD 649340 - 648078 - | phosphoribosylamine--glycine ligase TERM 678 649268 - 649302 + g 72 -12.2 -3.01712 | gap 1 CAGTGACCTCGCTGA CGCTGTCGCC-ACGC ATGAGC GCGTGGGCGATGGCG TGTTCACGCGCACCG TERM 679 649423 - 649393 - R 77 -8.4 -4.2204 | opp_overlap 649393 649393 649396, overlap 649395 649396 AATCTCAAGAAATAA TATCGGGGGT-GCC TGTTC GGCTACCCCCG-TA TGTTCGTTTACTGCA TERM 680 649422 - 649395 - R 70 -9.1 -3.69841 | gap 1, opp_overlap 649393 649393 649396, overlap 649393 649396 TCTCAAGAAATAATA TCGGGGGT-GCC TGTTC GGCTACCCCCGT ATGTTCGTTTACTGC TERM 681 649396 - 649421 + r 83 -12.6 -3.24202 | gap 1, opp_overlap 649395 649393 649396, overlap 649393 649393 CTCAAGAAATAATAT CGGGGGT-GCC TGTTC GGCTACCCCCG TATGTTCGTTTACTG TERM 682 649421 - 649396 - R 76 -12.6 -2.81182 | gap 1, opp_overlap 649396 649393 649393, overlap 649395 649393 CTCAAGAAATAATAT CGGGGGT-GCC TGTTC GGCTACCCCCG TATGTTCGTTTACTG purM 650465 - 649431 - | phosphoribosylaminoimidazole synthetase purF 651999 - 650485 - | amidophosphoribosyltransferase BAD_0522 652232 - 653866 + | hypothetical protein TERM 683 654133 - 654168 + T 100 -22.8 -3.49618 | opp_overlap 654133 TTGCTGTATATGAAA GGGTGGGTTCGGAATC ATGA GATTTCGAACCCACCC TTGATTATGTGAGCG TERM 684 654168 - 654133 - T 100 -20.6 -3.83026 | opp_overlap 654133 TTGCTGTATATGAAA GGGTGGGTTCGGAATC ATGA GATTTCGAACCCACCC TTGATTATGTGAGCG purQ_purL 657936 - 654202 - | phosphoribosylformylglycinamidine synthase TERM 685 656413 - 656388 - G 72 -12.5 -2.99471 | TGAGGTCCACATACA GGCCGTCGGCA AGCT CGCCGACCGCC ACGGACACGCCGCCC TERM 686 658047 - 658008 - R 82 -11.5 -3.885 | opp_overlap 658012 ATTGCGATATAACAA GGAAGCCCGCATCCG GCTTTCGCTT CAGATGCGGGCTTGC AAACGCATTACTCTG purC 658807 - 658055 - | phosphoribosylaminoimidazole-succinocarboxamide synthase purT 660196 - 658943 - | phosphoribosylglycinamide formyltransferase 2 BAD_0526 660232 - 661398 + | glycosyltransferase TERM 687 661472 - 661439 - T 77 -11 -3.5947 | opp_overlap 661441 661446, overlap 661440 661446 AATCGTTATACATAA GCGGAAAGCCGGGA GCGATT TCCCGGCTTTCCTT GTTTTGCGGACTGTC TERM 688 661471 - 661440 - T 83 -14.5 -2.752 | opp_overlap 661441 661446, overlap 661439 661446 ATCGTTATACATAAG CGGAAAGCCGGGA GCGATT TCCCGGCTTTCCT TGTTTTGCGGACTGT TERM 689 661441 - 661470 + T 100 -18.7 -4.17762 | opp_overlap 661440 661439 661446, overlap 661446 TCGTTATACATAAGC GGAAAGCCGGGAG CGAT TTCCCGGCTTTCC TTGTTTTGCGGACTG TERM 690 661465 - 661446 - T 76 -10.7 -3.71213 | opp_overlap 661441 661446, overlap 661440 661439 ATACATAAGCGGAAA GCCGGGA GCGATT TCCCGGC TTTCCTTGTTTTGCG TERM 691 661446 - 661465 + T 88 -11.4 -4.20834 | opp_overlap 661446 661440 661439, overlap 661441 ATACATAAGCGGAAA GCCGGGAG CGAT TTCCCGGC TTTCCTTGTTTTGCG tal 662515 - 661490 - | low specificity-threonine aldolase TERM 692 662595 - 662614 + H 81 -12.2 -3.53811 | opp_overlap 662595 GCGGATAGCAAAAAA CCTCGGAA TTTC TTCCGAGG TTTCACCGGGGTGGC TERM 693 662614 - 662595 - H 100 -12.2 -5.21709 | opp_overlap 662595 GCGGATAGCAAAAAA CCTCGGAA TTTC TTCCGAGG TTTCACCGGGGTGGC TERM 694 662877 - 662901 + H 100 -12.8 -5.13722 | CGGAAGATGTCACGA CGGGGTCGGC AGAAA GCCGGTCCCG TTTTGTTTTCCTCGG BAD_0528 662961 - 664022 + | Na+ dependent nucleoside transporter TERM 695 664043 - 664086 + T 100 -21.3 -4.24338 | gap 1, overlap 664047 ATTCGTGGCATCGGC CAG-GCAGCCTCTGAACCGT ACAGA ACGGTTCAGAGGCTGTTCTG TTTTGACCTGTTTTT TERM 696 664047 - 664081 + T 100 -23.1 -3.96506 | overlap 664043 GTGGCATCGGCCAGG CAGCCTCTGAACCGT ACAGA ACGGTTCAGAGGCTG TTCTGTTTTGACCTG BAD_0529 664612 - 664397 - | hypothetical protein TERM 697 664437 - 664473 + g 100 -27.5 -3.25823 | AGGTGGCGCGTGGGA GAGTGGCTCCGATGCCA GGA TGGCGTCGGAGCCACTC TTCGTATAACGGCCG rpsL 664759 - 665130 + | 30S ribosomal protein S12 rpsG 665136 - 665606 + | 30S ribosomal protein S7 fusA1 665637 - 667766 + | elongation factor G TERM 698 667960 - 667949 - g 70 -4.4 -4.55798 | CATGGCAAAGGAAAA GTAC GAGC GTAC TAAGCCGCACGTTAA tuf 667935 - 669134 + | elongation factor Tu BAD_0534 670265 - 669138 - | hypothetical protein TERM 699 669173 - 669216 + g 86 -18.4 -2.87132 | opp_overlap 669177 669181, overlap 669177 669181 CTTGAATTAGCGTTT TAAAGAAACCTCCCAAGGAT GCGA ATCCGAGGGAGGTTTCTTTA TATATGGAAGGGCAA TERM 700 669177 - 669212 + g 95 -14.8 -4.12532 | opp_overlap 669177 669181, overlap 669173 669181 AATTAGCGTTTTAAA GAAACCTCCCAAGGAT GCGA ATCCGAGGGAGGTTTC TTTATATATGGAAGG TERM 701 669212 - 669177 - G 90 -14.8 -3.54919 | opp_overlap 669177 669173 669181, overlap 669181 AATTAGCGTTTTAAA GAAACCTCCCAAGGAT GCGA ATCCGAGGGAGGTTTC TTTATATATGGAAGG TERM 702 669181 - 669208 + g 89 -9.8 -4.65722 | opp_overlap 669177 669181, overlap 669177 669173 AGCGTTTTAAAGAAA CCTCCCAAGGAT GCGA ATCCGAGGGAGG TTTCTTTATATATGG TERM 703 669208 - 669181 - G 87 -9.8 -4.41616 | opp_overlap 669181 669177 669173, overlap 669177 AGCGTTTTAAAGAAA CCTCCCAAGGAT GCGA ATCCGAGGGAGG TTTCTTTATATATGG TERM 704 669956 - 669981 + g 90 -17.7 -3.14564 | opp_overlap 669959, overlap 669959 GTATGAAGCGGATGA GAAGGGACAGG ACAT CCTGTCCCTTC TTGCTGAGCGCATCG TERM 705 669978 - 669959 - G 86 -13.6 -3.42574 | opp_overlap 669959 669956 TGAAGCGGATGAGAA GGGACAGG ACAT CCTGTCCC TTCTTGCTGAGCGCA TERM 706 669959 - 669978 + g 91 -13.6 -3.71848 | opp_overlap 669959, overlap 669956 TGAAGCGGATGAGAA GGGACAGG ACAT CCTGTCCC TTCTTGCTGAGCGCA carA 670458 - 671648 + | carbamoyl phosphate synthase small subunit TERM 707 672364 - 672348 - g 75 -7.9 -4.18018 | CTGCCCGATCCAAAA CGTCGAC CCC GTCGGCG TGCACACCGGCGACT carB 671641 - 675021 + | carbamoyl-phosphate synthase large chain BAD_0537 675021 - 675962 + | orotidine 5'-phosphate decarboxylase BAD_0538 676023 - 676610 + | guanylate kinase TERM 708 676695 - 676642 - T 100 -23.3 -5.10461 | opp_overlap 676646 676656, overlap 676644 TCCAGCCAATAAAAA CCGGCATACGAAAAGGGCCTGCACG ATTT CGCGCAGGCCCTTTTCGTATGTTTG AATCAGGCGAGACCG TERM 709 676693 - 676644 - T 100 -24.5 -2.78609 | opp_overlap 676646 676656, overlap 676642 CAGCCAATAAAAACC GGCATACGAAAAGGGCCTGCACG ATTT CGCGCAGGCCCTTTTCGTATGTT TGAATCAGGCGAGAC TERM 710 676646 - 676691 + T 100 -29.3 -3.64703 | opp_overlap 676644 676642, overlap 676656 GCCAATAAAAACCGG CATACGAAAAGGGCCTGCACG ATTT CGCGCAGGCCCTTTTCGTATG TTTGAATCAGGCGAG TERM 711 676656 - 676681 + T 100 -16.1 -4.46493 | opp_overlap 676644 676642, overlap 676646 ACCGGCATACGAAAA GGGCCTGCACG ATTT CGCGCAGGCCC TTTTCGTATGTTTGA ilvD 678557 - 676698 - | dihydroxy-acid dehydratase rpoZ 678772 - 679056 + | DNA-directed RNA polymerase subunit omega TERM 712 679563 - 679540 - g 77 -11.8 -3.59627 | gap 1, opp_overlap 679545 AGCAAAGTCCGGAAA TCAACCAGGGC GTT GCCC-GGTTGA GTGGCGAGGAGGAGT metK 679230 - 680444 + | S-adenosylmethionine synthetase TERM 713 681596 - 681578 - g 82 -12.4 -3.68265 | AAAGCCAATGGGAAA CCGACGCG GCG CACGTCGG AGATACGCAGGTGAG priA 680503 - 682734 + | primosome assembly protein PriA BAD_0543 682801 - 683511 + | alpha beta hydrolase TERM 714 683540 - 683583 + F 71 -10.4 -3.20382 | gap 1 TTAGACAGACGGTTG TGCTTGCGGTCGCTATGCG GGATCGA CGCATA-CGGTCGCATGCA TTGATGGATATGAAA TERM 715 684528 - 684505 - g 71 -9.5 -3.75153 | overlap 684520 684524 CTGCTGGAAGTTAAA GCGCAAGGC AAGAAA GCCATGCGC GCCGCCGACTGGGCC fmt 683617 - 684579 + | methionyl-tRNA formyltransferase serB 685414 - 684731 - | phosphoserine phosphatase BAD_0546 685488 - 687035 + | AAA ATPase family protein BAD_0547 687107 - 688690 + | proteasome-associated protein BAD_0548 688825 - 689655 + | inositol monophosphatase TERM 716 689660 - 689701 + F 76 -12.4 -3.01712 | gap 1, opp_overlap 689659 689658 689656, overlap 689666 ATTTGGCATAAGACT GATTGACTGCCCCACACCT GGGTA AGGTGTGGGGCAGT-ATGC TATTCGCAGGAGAAC TERM 717 689666 - 689696 + F 100 -21.3 -2.9155 | opp_overlap 689659 689658 689656, overlap 689660 CATAAGACTGATTGA CTGCCCCACACCT GGGTA AGGTGTGGGGCAG TATGCTATTCGCAGG BAD_0549 689940 - 691406 + | proteasome-associated protein TERM 718 691407 - 691451 + T 95 -15.2 -3.27029 | gap 1, opp_overlap 691394 691413, overlap 691408 691413 GAGGCTTTGCAGTAG CCAAAAGCCTGCGATGGAAGA CTCG TCT-CCACCGCAGGCTTTTGA TATTGGTTGGTCGGA TERM 719 691408 - 691450 + T 100 -18.7 -2.55896 | gap 1, opp_overlap 691413, overlap 691407 691413 AGGCTTTGCAGTAGC CAAAAGCCTGCGATGGAAGA CTCG TCT-CCACCGCAGGCTTTTG ATATTGGTTGGTCGG TERM 720 691445 - 691413 - T 100 -15 -4.21194 | gap 1, opp_overlap 691408 691407 691413 TTGCAGTAGCCAAAA GCCTGCGATGGAAGA CTCG TCT-CCACCGCAGGC TTTTGATATTGGTTG TERM 721 691413 - 691445 + T 100 -12.8 -4.46404 | gap 1, opp_overlap 691413, overlap 691408 691407 TTGCAGTAGCCAAAA GCCTGCGATGGAAGA CTCG TCT-CCACCGCAGGC TTTTGATATTGGTTG BAD_0550 692280 - 691480 - | hypothetical protein BAD_0551 692636 - 692277 - | MarR-type transcriptional regulator TERM 722 692531 - 692560 + g 71 -7.1 -4.21098 | overlap 692532 TCCGCACGTGTGTGG TGGCGCGTGCC ATGGTCTG GGCACGTGTCG TTTTGAGCTTGGTGT TERM 723 692759 - 692726 - R 100 -19.1 -6.23317 | opp_overlap 692728 692730 ATAAAAAGAAAAAAA GAGAGGTTCCAACCA TCCG TGGTTGAAACCTCTC ATATAGGTCTGCGTG TERM 724 692728 - 692757 + r 78 -13.7 -2.65815 | opp_overlap 692726, overlap 692730 AAAAAGAAAAAAAGA GAGGTTCCAACCA TCCG TGGTTGAAACCTC TCATATAGGTCTGCG hup 693062 - 692781 - | DNA-binding protein HB1 BAD_0553 695652 - 693217 - | hypothetical protein TERM 725 695766 - 695725 - R 100 -34.7 -2.78384 | opp_overlap 695725, overlap 695754 TCGTCTCCGATGATA CGCCTTGGGGCGGCTGTGT GAAA ACACAGCCGCCCCAAGGCG TATCATCCGCAAGAT TERM 726 695725 - 695766 + r 100 -34.7 -2.78463 | opp_overlap 695725 695754 TCGTCTCCGATGATA CGCCTTGGGGCGGCTGTGT GAAA ACACAGCCGCCCCAAGGCG TATCATCCGCAAGAT purB 697242 - 695800 - | adenylosuccinate lyase BAD_0555 698841 - 697282 - | hypothetical protein TERM 727 697746 - 697764 + g 76 -10.2 -3.82665 | overlap 697748 TTTCCACGGGATCAT CCGGCTGG ATG CCAGCCTG TTTCATGGTCTCATC TERM 728 697748 - 697762 + g 74 -11.4 -3.49482 | overlap 697746 TCCACGGGATCATCC GGCTGG ATG CCAGCC TGTTTCATGGTCTCA BAD_0556 699167 - 698838 - | hypothetical protein TERM 729 699283 - 699237 - R 70 -3 -4.7373 | gap 1 CGAGTCTATGAAAAA CCGTCGGCGTG-TCGTTATTG GGAAAA CAACGAAAACCACGTCGACGG CATGTGGATAACTAT ebpS 699886 - 699314 - | cell surface elastin binding protein EbpS BAD_0558 700902 - 699883 - | hypothetical protein BAD_0559 701966 - 700899 - | hypothetical protein TERM 730 701919 - 701892 - G 78 -13.4 -3.21099 | CGCGGCCACCAGCAA CGTGACGCCGGC AACG GCCAGCACCACG ATGACGCCTGCCAGA BAD_0560 702488 - 701967 - | hypothetical protein BAD_0561 703441 - 702488 - | hypothetical protein BAD_0562 704505 - 703438 - | magnesium chelatase family protein TERM 731 704036 - 704069 + g 75 -7.6 -4.19238 | gap 3, overlap 704025 704036 704038 CCGATGGTGGTCGCG CCC--TCCGCCATGGCT TCA AGC-ATGGCGGACTGGG TTTTCGCGTTGGAAC ung 705228 - 704524 - | uracil-DNA glycosylase TERM 732 704554 - 704598 + g 90 -15.1 -3.53012 | opp_overlap 704596 GGTCCAATCCACCGG CTGTTCTCCTGCTTCGATTAG CGC CTGATTGGCGCGGGAGAACGG TTTCGAGCCGAAAAA BAD_0564 705366 - 706079 + | hypothetical protein TERM 733 706104 - 706131 + F 100 -12.8 -5.27476 | GTCCGAACCGGTTTG GAACCTCGCC CGAACATA GGCGAGGTTC TTTTATTTTCTTGGA TERM 734 706220 - 706240 + F 72 -11.9 -2.63631 | ACGTCATCGGGTTTG GCACTCTCG ACG TGAGAGTGC TAATCTGCGAATTAG TERM 735 707945 - 707919 - g 82 -12.2 -3.61398 | CGTGGTGGCCAACAA GCCGGAACCGCC GGC AGCCGCTCCGGC AGCTGGCGCCGACAT groEL 706354 - 707970 + | chaperonin GroEL TERM 736 708014 - 708040 + T 100 -21.6 -4.04174 | opp_overlap 708014 708004 AAATAGCTGATATGA GGCCCGCTTCCC GAT GGGGAGCGGGCC TTTGCTTATCTGGAA TERM 737 708040 - 708014 - T 100 -19.4 -2.64987 | opp_overlap 708014, overlap 708004 AAATAGCTGATATGA GGCCCGCTTCCC GAT GGGGAGCGGGCC TTTGCTTATCTGGAA BAD_0566 708365 - 708075 - | hypothetical protein TERM 738 708759 - 708744 - g 78 -4.6 -4.84274 | opp_overlap 708750 708756, overlap 708747 CAACCAGACGAAAAA GGAGAC CGGC GTCACC GTCCGTTTGGTGTAT TERM 739 709067 - 709047 - g 85 -6.7 -4.82901 | overlap 709049 TTCGGTGCAGAAAAA GACCTCGAC TTC GTCGCGGAC CATATGGATTGGCGT TERM 740 709065 - 709049 - g 71 -7.9 -4.03995 | overlap 709047 CGGTGCAGAAAAAGA CCTCGAC TTC GTCGCGG ACCATATGGATTGGC BAD_0567 708499 - 709338 + | hypothetical protein BAD_0568 709342 - 710073 + | response regulator of two-component system TERM 741 710487 - 710461 - g 89 -10 -4.69326 | opp_overlap 710484 ACAGCGAATACAAAA GCACGGGTGCCG GAT CGGTGCCCATGC TCCGTGACGGAGTGG TERM 742 710883 - 710863 - g 100 -12.5 -5.09225 | overlap 710875 AGCGGATTGAAAAAA CCGCCGCGA AAA TCGCCGCGG GAGATCTCAGCCAAC BAD_0569 710148 - 711929 + | sensor protein cspB 712081 - 712473 + | cold shock protein BAD_0571 712480 - 713877 + | hypothetical protein TERM 743 713885 - 713937 + T 100 -16.6 -5.49579 | gap 1, opp_overlap 713894 713896, overlap 713887 713889 ACGAATAATCGTCAT C-GTATATGAGAGGGCCACGTAC CTGAATGT GTACGTGGCCCTCTCATATCTTG TTTTCTTTTTTATGC TERM 744 713887 - 713934 + T 100 -21.6 -4.75934 | opp_overlap 713894 713896, overlap 713885 713889 GAATAATCGTCATCG TATATGAGAGGGCCACGTAC CTGAATGT GTACGTGGCCCTCTCATATC TTGTTTTCTTTTTTA TERM 745 713889 - 713932 + T 100 -24.2 -3.9222 | opp_overlap 713894 713896, overlap 713887 713885 ATAATCGTCATCGTA TATGAGAGGGCCACGTAC CTGAATGT GTACGTGGCCCTCTCATA TCTTGTTTTCTTTTT TERM 746 713927 - 713894 - T 95 -18.3 -2.63596 | opp_overlap 713889 713887 713885, overlap 713896 CGTCATCGTATATGA GAGGGCCACGTAC CTGAATGT GTACGTGGCCCTC TCATATCTTGTTTTC TERM 747 713925 - 713896 - T 86 -15.1 -2.85999 | opp_overlap 713889 713887 713885, overlap 713894 TCATCGTATATGAGA GGGCCACGTAC CTGAATGT GTACGTGGCCC TCTCATATCTTGTTT BAD_0572 715019 - 713955 - | hypothetical protein TERM 748 717012 - 717001 - g 74 -3.6 -4.82855 | overlap 716993 GACGAAATCGAAAAA GCCC ATCC GGAC ATTTTCAACACGCTG TERM 749 717661 - 717632 - g 73 -10 -3.66095 | overlap 717620 717633 717649 717653 AAACGGCCACTGAAA CCGATGCCGCCA CTGAAC CGACGGCATCGA CGGAACCGGCTGATT clpC1 715102 - 717696 + | ATP-dependent Clp protease ATP-binding subunit TERM 750 717786 - 717744 - T 100 -25.2 -4.66163 | opp_overlap 717744 ACGCGTATGCAAAAA GACCGGTGGGTTTCATGA TGGAATG TCATGAAACCCACCGGTC TTTTTTACATATGCC TERM 751 717744 - 717786 + T 100 -26.6 -5.1287 | opp_overlap 717744 ACGCGTATGCAAAAA GACCGGTGGGTTTCATGATG GAA TGTCATGAAACCCACCGGTC TTTTTTACATATGCC TERM 752 717824 - 717875 + T 95 -18 -2.87564 | overlap 717806 717805 717873 CCAGCTATTCGTTCA GCTGGACGGTTGTGGTTCCGCCCG CTTC CAAGCGGAACCACAACCGTATCGC TCTATGGGAGCGTCA BAD_0574 719318 - 717891 - | hypothetical protein hisS 719433 - 720824 + | histidyl-tRNA synthetase TERM 753 722017 - 722042 + G 72 -11.7 -3.38812 | opp_overlap 722015 722016 722032, overlap 722016 CGGTCTGAAGGAAGC CGTCGGCGCCG AAGA CGGCGACGCCG TGTTCTTCGCAGCCG aspS 720872 - 722671 + | aspartyl-tRNA synthetase TERM 754 722701 - 722727 + F 100 -13.8 -5.64873 | opp_overlap 722701 TAGATGAATGAAAAA TGTCCGAACATC AAT GATGCTCGGACA TTTTTTATTATTCGC TERM 755 722727 - 722701 - f 100 -16 -4.91873 | opp_overlap 722701 TAGATGAATGAAAAA TGTCCGAACATC AAT GATGCTCGGACA TTTTTTATTATTCGC BAD_0577 722865 - 724370 + | glutamine ABC transporter (binding and transport protein) BAD_0578 724367 - 725107 + | putative amino acid ABC transporter gluA 725242 - 726039 + | ATP-binding protein of ABC transporter for glutamate gluB 726106 - 726918 + | glutamate-binding protein of ABC transporter system TERM 756 727427 - 727409 - g 81 -8 -4.58395 | overlap 727411 CGCATTGCTGAAAAA CTCCACCG TCG CGGCGGCG GCATCCGTGGCCACC gluC 726918 - 727595 + | permease protein of ABC transporter for glutamate gluD 727602 - 728729 + | permease protein of ABC transporter for glutamate TERM 757 728754 - 728790 + F 86 -12.3 -3.88766 | opp_overlap 728777 CGCATAACACGCGTA GGGGTCGTTTTTCCG CGAAATA CGGGGAAGCGGCCCC TTTCGTGTCTACGAT TERM 758 728901 - 728878 - f 84 -6 -5.07053 | gap 1, overlap 728880 AAGGATGCGAAAAAA GA-CGACGCCA GAA TGTCGTCGATC GCGAAAACGCTGAAC TERM 759 728898 - 728880 - f 80 -8.8 -4.15748 | overlap 728878 GGATGCGAAAAAAGA CGACGCCA GAA TGTCGTCG ATCGCGAAAACGCTG BAD_0583 728890 - 729849 + | hypothetical protein BAD_0584 732389 - 729831 - | DEAD box-like helicase TERM 760 729892 - 729940 + g 78 -16.1 -2.62263 | TGCGTGGCGTCCAGG TCGACGGTTCCGGTGATGGCC CAATCGT GGTCGCCATCGGAATCGTCGA TGATCTGCCGCACCT TERM 761 732920 - 732898 - g 71 -8.4 -4.09685 | GCCCAGTGTGGAAAA CCGCGACG TCACCTT CATCGCGG CCACCACGGAAAACC TERM 762 733212 - 733187 - g 83 -4.7 -5.10077 | gap 1, opp_overlap 733204, overlap 733177 733196 AAAGAGCGCAAAAAA GGCGCGA-AACG GCC CATCATCACGCC TGATGTGGTGTCGAA TERM 763 733359 - 733378 + G 74 -12.1 -3.14132 | TGGCCCGCATGCTGC GCGCGGG GGAAGA CCCGCGC TTCATCGCACGACGC BAD_0585 732473 - 733873 + | recombination factor protein RarA TERM 764 735182 - 735198 + G 71 -7.9 -4.09818 | TCCATGCGGCTGACG CCGGCCA CGC TTGCCGG TTTCTACTTCATCTT BAD_0586 734012 - 735523 + | efflux-type transporter clp1 735629 - 736249 + | ATP-dependent Clp protease proteolytic subunit 2 clpP 736252 - 736953 + | ATP-dependent Clp protease proteolytic subunit TERM 765 736982 - 737018 + G 100 -19.6 -4.36914 | opp_overlap 736982 736983 736987, overlap 736984 TGATATCTTCACAAA TGCAATACCCCTGCCG GGTCG CGGCAGGGGTATTGTG TTTTCTAAACGGCAG TERM 766 737018 - 736982 - g 93 -15.2 -3.88787 | opp_overlap 736982 736984, overlap 736983 736987 TGATATCTTCACAAA TGCAATACCCCTGCCG GGTCG CGGCAGGGGTATTGTG TTTTCTAAACGGCAG TERM 767 737017 - 736983 - g 86 -18.7 -2.92951 | opp_overlap 736982 736984, overlap 736982 736987 GATATCTTCACAAAT GCAATACCCCTGCCG GGTCG CGGCAGGGGTATTGT GTTTTCTAAACGGCA TERM 768 736984 - 737016 + G 100 -22.2 -3.79419 | opp_overlap 736983 736982 736987, overlap 736982 ATATCTTCACAAATG CAATACCCCTGCCG GGTCG CGGCAGGGGTATTG TGTTTTCTAAACGGC TERM 769 737013 - 736987 - g 95 -18.1 -3.32997 | opp_overlap 736984 736982, overlap 736983 736982 TCTTCACAAATGCAA TACCCCTGCCG GGTCG CGGCAGGGGTA TTGTGTTTTCTAAAC TERM 770 737323 - 737309 - g 70 -4.2 -4.57569 | overlap 737311 GGAGTCCGCCAAAAA GACACT TTC AGTGGC GGTGTACAACCATTA clpX 736950 - 738371 + | ATP-dependent protease ATP-binding subunit TERM 771 738656 - 738681 + F 100 -11.1 -4.8743 | opp_overlap 738657, overlap 738657 GTCTCGCGCACATGA ACCTCCTTCGC GAAT GCGGAGGAGGC TTTCTTTATTTTCCA TERM 772 738680 - 738657 - f 78 -12.4 -3.25823 | opp_overlap 738657 738656 TCTCGCGCACATGAA CCTCCTTCGC GAAT GCGGAGGAGG CTTTCTTTATTTTCC TERM 773 738657 - 738680 + F 95 -14.6 -3.50831 | opp_overlap 738657, overlap 738656 TCTCGCGCACATGAA CCTCCTTCGC GAAT GCGGAGGAGG CTTTCTTTATTTTCC nhaA 738838 - 740202 + | sodium/proton antiporter TERM 774 740267 - 740209 - T 100 -22.1 -3.75465 | gap 1, opp_overlap 740225 740262, overlap 740210 740261 GAACAGTAAAAGGAA TCTC-CATATGTTGAAAGGGCCACGCAT CCCC ATGCATGGCCCTTTCAACATATGCGTGC CATTGCGGCACGGCT TERM 775 740266 - 740210 - T 100 -25.6 -2.84195 | gap 1, opp_overlap 740225 740262, overlap 740209 740261 AACAGTAAAAGGAAT CTC-CATATGTTGAAAGGGCCACGCAT CCCC ATGCATGGCCCTTTCAACATATGCGTG CCATTGCGGCACGGC TERM 776 740225 - 740250 + T 89 -13.3 -3.5944 | opp_overlap 740210 740209 CTCCATATGTTGAAA GGGCCACGCAT CCCC ATGCATGGCCC TTTCAACATATGCGT safC 740970 - 740299 - | methyltransferase BAD_0592 741889 - 740972 - | iron sulfur protein associated with succinate dehydrogenase TERM 777 741423 - 741399 - G 70 -12.8 -2.96695 | overlap 741396 TCGGCGATCAAATCA CGCTGCACGG GGAAA CCGGGCAGCG GTGCGAGCTCGATGA TERM 778 741807 - 741840 + g 72 -12.5 -3.01712 | gap 1 AACGGCGAGCCGCCT CGTTCACGGCCGCGTT CGG GACGCGGC-GTGAACC TGTTCACCCGCAACG sdhA 743804 - 741948 - | succinate dehydrogenase flavoprotein subunit BAD_0594 745177 - 743873 - | hypothetical protein BAD_0595 746703 - 745174 - | hypothetical protein BAD_0596 747155 - 746703 - | hypothetical protein TERM 779 746795 - 746773 - G 79 -9.1 -4.15565 | GTGACGACGTCAAAA CGCACGCCA CTGTT CGGCATGCG GTGCTCCGGCGCCGT BAD_0597 748200 - 747325 - | pyridoxine kinase TERM 780 748061 - 748045 - G 71 -7.9 -4.07568 | CGTGTGCGCGGAAAA CAGCGCC GTC GGCACCG GACAAACGTCGCAGC TERM 781 748489 - 748451 - H 72 -11.6 -3.13403 | overlap 748449 TTGTCGCTACCAACA CCTGGCCAAGCGCCCTAC ACG GCAGGGCGGGTGGCCAAC CAAGACGAGAACAAC cysD 748531 - 749841 + | O-acetylhomoserine (thiol)-lyase TERM 782 749861 - 749908 + F 100 -15.5 -3.61103 | opp_overlap 749859 749858 749855, overlap 749862 GGTCTGAAACAACTG TCGGGCGGTCCGCTGCACC ATGAGAAGGG GGTGTTGCGGGCCGCCCGC TTTGCACTGCGCTTG TERM 783 749862 - 749907 + F 100 -19 -2.7634 | opp_overlap 749859 749858 749855, overlap 749861 GTCTGAAACAACTGT CGGGCGGTCCGCTGCACC ATGAGAAGGG GGTGTTGCGGGCCGCCCG CTTTGCACTGCGCTT TERM 784 749953 - 749973 + F 70 -9.1 -3.76224 | opp_overlap 749944, overlap 749946 TAAAATTTTCGCTTG TTGCGATAT GGT ATGTCGCAA TTTGATACATCGAAA BAD_0599 750045 - 750626 + | hypothetical protein TERM 785 750641 - 750699 + F 100 -22.7 -2.5661 | opp_overlap 750648 750652, overlap 750648 750652 ATACATTATTGTCTT GCATAAATAAAGCCCGTGGGTTCACCG ATGAA CGGCGATTCCACGGGCTTTATTTATAC ATATTCGTTCATATA TERM 786 750692 - 750648 - f 100 -19.4 -3.85817 | opp_overlap 750641 750648 750652, overlap 750652 ATTGTCTTGCATAAA TAAAGCCCGTGGGTTCACCG ATGAA CGGCGATTCCACGGGCTTTA TTTATACATATTCGT TERM 787 750648 - 750692 + F 100 -19.4 -3.98172 | opp_overlap 750648 750652, overlap 750641 750652 ATTGTCTTGCATAAA TAAAGCCCGTGGGTTCACCG ATGAA CGGCGATTCCACGGGCTTTA TTTATACATATTCGT TERM 788 750688 - 750652 - f 100 -15.8 -4.55295 | opp_overlap 750648 750641 750652, overlap 750648 TCTTGCATAAATAAA GCCCGTGGGTTCACCG ATGAA CGGCGATTCCACGGGC TTTATTTATACATAT TERM 789 750652 - 750688 + F 100 -15.8 -4.58085 | opp_overlap 750652 750648, overlap 750648 750641 TCTTGCATAAATAAA GCCCGTGGGTTCACCG ATGAA CGGCGATTCCACGGGC TTTATTTATACATAT cbiO2 750784 - 752409 + | ABC-type cobalt transport system, ATPase component BAD_0601 752409 - 753221 + | cobalt transport protein TERM 790 753326 - 753342 + G 85 -12.3 -3.70902 | GACCATGCAGGCGCT TGCCGAC AAG GTCGGCA TTTCCGTATACGCGG BAD_0602 753231 - 754250 + | regulatory proteins BAD_0603 754383 - 755174 + | ABC transporter ATP-binding protein TERM 791 757172 - 757146 - g 95 -13 -4.17556 | overlap 757167 CAGACCGGCAAGAAA CTCGCCTTCGCC AAC GGCAAAGCCGAG TTCGACACCACCAGG BAD_0604 755232 - 757877 + | transport protein TERM 792 757912 - 757891 - T 84 -13.1 -3.33265 | opp_overlap 757891, overlap 757886 AGGCGATAAACGGAA TGCTCCTTC GAAA GAAGGAGCA TTTTTGTTGCCGAAT TERM 793 757891 - 757912 + T 100 -13.1 -5.06816 | opp_overlap 757891 757886 AGGCGATAAACGGAA TGCTCCTTC GAAA GAAGGAGCA TTTTTGTTGCCGAAT BAD_0605 758693 - 757944 - | response regulator of two-component system BAD_0606 761379 - 758770 - | histidine kinase sensor of two-component system TERM 794 761896 - 761922 + G 76 -5.6 -4.58283 | overlap 761897 761898 761920 GTGATTGAGGGCATG GACGGCGACGGC AAG GCCGGTGCCGCG TTTTTGAAGCGCTTC TERM 795 762878 - 762850 - g 70 -10.3 -3.53012 | TCCGTGGTCTTCAAA CGCCTGTTCAACG AAG CACTGAACAGGGG AGATCTGGAAGAACT pap 761557 - 762900 + | proline iminopeptidase TERM 796 763232 - 763211 - g 73 -10.1 -3.56704 | opp_overlap 763230 GCGTCATCAAACCAA TCGCCGGCG CGCT CGCCAACGA AAGCACATTCGTCGT TERM 797 763456 - 763407 - g 76 -9.4 -4.11692 | gap 1, overlap 763450 GACCGACGCGCAAAA CGAGACGTTCGA-AAAGCTGTTC TCATC GATCAGCCTCATCGAACGCGTCG ACTCCGCGCATATGG proC 762961 - 763761 + | pyrroline-5-carboxylate reductase BAD_0609 763779 - 764879 + | translation-associated GTPase TERM 798 764910 - 764935 + G 95 -14.7 -4.13767 | CGTATAGTGCGTCAG GCGCTCGGACC GGTC GGTTCGGGCGC TTTTCGCGTAAAAGA BAD_0610 764901 - 765329 + | hypothetical protein BAD_0611 765467 - 767434 + | ferrous iron transport protein B BAD_0612 767440 - 767772 + | peptidase TERM 799 768254 - 768242 - g 83 -4.7 -5.10767 | overlap 768250 CATCCAAGAGAAAAA CGCCG AAA CCGCG TTGCAGGATCCGAAG BAD_0613 767787 - 768680 + | hypothetical protein TERM 800 769240 - 769264 + G 78 -2.2 -5.10208 | opp_overlap 769233, overlap 769242 769243 769261 GCATATGAGCTTCGG TGACGCC-ATGA CTA TCATCGGCG-CG TTTTTCTTCGCGTTG BAD_0614 768749 - 769696 + | hypothetical protein BAD_0615 770823 - 769693 - | hypothetical protein BAD_0616 771660 - 770920 - | putative magnesium transporter BAD_0617 772728 - 772000 - | hypothetical protein TERM 801 773171 - 773200 + H 100 -17.2 -3.44146 | opp_overlap 773160 CAAACGCGTGATATG CGGGAGCCGAGC CGTTAA GCTTGGCTCCCG TTACTTATAGGAGGA TERM 802 773662 - 773626 - g 75 -7.8 -4.21631 | gap 1, overlap 773622 AACCCACGTAAGAAA GCCGCCGCGCGCGACGC CGTG GCGCAG-GCGCTGCCGC AATCGCATCAAGGTG BAD_0618 773248 - 774087 + | hypothetical protein trrA 774143 - 774889 + | AraC family transcriptional regulator TERM 803 775254 - 775293 + G 76 -14.3 -2.62184 | gap 1, opp_overlap 775271, overlap 775283 TCGTGGAGGCTTACG GCCACCGGCCGCAAGCAG GCGGA CTGCAT-CGGCCGCTGGC TGGTCTCACAGCAGC BAD_0620 775113 - 775925 + | hypothetical protein TERM 804 776000 - 776046 + F 100 -8.9 -4.8622 | gap 3 ATCTCGCGTGCGCAA CGCGCC-CGTGTCCAC-GCC CCACTACAAT GGCTGTG-ACACGCGGCGCG TTTTTGCTTGCCGCG pyrP 776086 - 777375 + | purine or uracil permease TERM 805 777405 - 777433 + F 100 -17.4 -4.87893 | CGCTGGCTAGTTCAA CGCCCGTCGGCC AAAAA GGTCGGCGGGCG TTTTTCATTGCCGTT BAD_0622 777533 - 778243 + | hypothetical protein TERM 806 778303 - 778319 + F 73 -10.9 -3.38046 | overlap 778301 CTACTGTTAACAGGT TTGCGCA ACG TGCGCAA TGTTTGACATGAAAG BAD_0623 778341 - 780527 + | ATP-dependent RNA helicase TERM 807 780586 - 780552 - T 100 -13.7 -4.86621 | gap 1, opp_overlap 780552 ACGGTCAAGCAAAAA GCCGTTCATTCC-AGC AATC GCAAGGAATGAACGGC TTTTTCTATACGGGA TERM 808 780552 - 780586 + T 100 -13.7 -4.96848 | gap 1, opp_overlap 780552 ACGGTCAAGCAAAAA GCCGTTCATTCC-AGC AATC GCAAGGAATGAACGGC TTTTTCTATACGGGA BAD_0624 781400 - 780612 - | hypothetical protein BAD_0625 782170 - 781397 - | ATP binding protein of ABC transporter TERM 809 782211 - 782228 + H 74 -7.7 -4.07885 | overlap 782212 ACGGTTCACGGCGGT TTCAGGG TTTT CCCTGAG TTTTGAGGCGAAATC BAD_0626 782310 - 783710 + | hypothetical protein TERM 810 785022 - 784998 - g 84 -9.9 -4.26076 | opp_overlap 784998, overlap 785002 CCATTCGCACGAAAA GCGAGACCGTG CTG CGCGGTATCGC CATCACGTTCGCCGC TERM 811 785716 - 785684 - g 71 -7.5 -4.2461 | ACCGCCATCAACAAA GCCAAGCGCGACGGC ATC ACCGACGTGCTCGCC ACATTCAAGGAATCG BAD_0627 783761 - 786349 + | hypothetical protein TERM 812 786364 - 786397 + F 76 -10.3 -3.65902 | gap 1, overlap 786365 AAACCATGTGATTGG TTGACGGCCCGTCATC CCT GA-GATGGGCCGTCGC TTTGGGTGCGCTCGG TERM 813 786365 - 786396 + F 79 -13.8 -2.79327 | gap 1, overlap 786364 AACCATGTGATTGGT TGACGGCCCGTCATC CCT GA-GATGGGCCGTCG CTTTGGGTGCGCTCG gnt 786455 - 787918 + | 6-phosphogluconate dehydrogenase TERM 814 787942 - 788000 + T 100 -19.1 -3.16683 | overlap 787944 TTGCCTCCGTGTCAG GGCGGATATGCCAGAGGTCTTGCGATG TGTTC CATTGCAAGACCTCTGGCATATGCATA TTACTGAGCTGCGAT TERM 815 787944 - 787998 + T 100 -23.9 -3.14602 | overlap 787942 GCCTCCGTGTCAGGG CGGATATGCCAGAGGTCTTGCGATG TGTTC CATTGCAAGACCTCTGGCATATGCA TATTACTGAGCTGCG TERM 816 788261 - 788247 - T 95 -12.8 -4.07568 | opp_overlap 788247 GCCTGCTGCGGAAAA GGCCGG AAA CCGGCC TTTTCCATGACCCCG TERM 817 788247 - 788261 + T 95 -12.8 -4.18018 | opp_overlap 788247 GCCTGCTGCGGAAAA GGCCGG AAA CCGGCC TTTTCCATGACCCCG TERM 818 788383 - 788420 + T 95 -14.1 -3.24289 | opp_overlap 788385, overlap 788376 788385 TCAACACTCAAAAAA AAGGGGTGTCTCACGGC ATGA GTCGCGGGACACCCCTG TTACCTGTTTCGGAT TERM 819 788418 - 788385 - T 100 -14.5 -5.85178 | opp_overlap 788383 788376 788385 AACACTCAAAAAAAA GGGGTGTCTCACGGC ATGA GTCGCGGGACACCCC TGTTACCTGTTTCGG TERM 820 788385 - 788418 + T 100 -16.7 -3.182 | opp_overlap 788385, overlap 788383 788376 AACACTCAAAAAAAA GGGGTGTCTCACGGC ATGA GTCGCGGGACACCCC TGTTACCTGTTTCGG BAD_0629 789238 - 788441 - | 6-phosphogluconolactonase BAD_0630 790215 - 789268 - | hypothetical protein zwf2 791774 - 790212 - | glucose-6-phosphate 1-dehydrogenase BAD_0632 791948 - 793312 + | MATE efflux family protein BAD_0633 793543 - 794157 + | hypothetical protein TERM 821 794841 - 794802 - g 100 -19.4 -4.56914 | GCATTGAAACCAAAA TCCGTCTGCTCCAACTCG AAGG CGTGCTGAAGCAGACGGA ACGGATGGATGTGGA BAD_0634 794243 - 794896 + | putative 6-O-methylguanine DNA methyltransferase TERM 822 794890 - 794908 + T 83 -8.1 -4.46267 | GATTTGGCGATCCAC CCGCTGA CGGCT TCGGCGG TTTTACTTGCGTTGT BAD_0635 796653 - 795448 - | two-component system sensor histidine kinase BAD_0636 797579 - 796674 - | hypothetical protein TERM 823 797662 - 797624 - R 100 -19 -3.76125 | GTACTTGAAGTCAAA CAGGGAGCCACGTTCG TCTGGAG CGAACACGGCTCCCTG CGGAAAATCGGGAAA BAD_0637 798217 - 797702 - | NAD(P)H oxidoreductase TERM 824 798225 - 798237 + H 89 -3.4 -5.5074 | overlap 798232 GTCTTCATTCATGCT CCTT GTCCA AAGG TTTTTTGTTACGTTC BAD_0638 798456 - 799232 + | hypothetical protein alzD 799229 - 799567 + | branched-chain amino acid permease BAD_0640 800896 - 799598 - | B-hexosaminidase TERM 825 800722 - 800709 - G 70 -3.7 -4.62069 | CGGCGAGTGGAAAAA GCTGC GGTG GCGGC GTCCGATGGGGAAGC TERM 826 803674 - 803647 - g 76 -10.6 -3.79906 | CCAGGCGCAGAACAA CTTCAACGCGTC CGCC GACGTGTCGAAG GAACTCAACCTGCTC BAD_0641 800966 - 804217 + | hypothetical protein TERM 827 804286 - 804243 - f 100 -16.8 -3.72695 | gap 1, opp_overlap 804247, overlap 804245 804246 ATTCCCTTCATGAAA TAC-GCAGGGGCCGGCTCCTT CCA AAGGAACCGGCCCCTGTTGTC GTTCGCCGCCGGGTA TERM 828 804283 - 804245 - f 100 -19.6 -3.44848 | opp_overlap 804247, overlap 804243 804246 TCCCTTCATGAAATA CGCAGGGGCCGGCTCCTT CCA AAGGAACCGGCCCCTGTT GTCGTTCGCCGCCGG TERM 829 804282 - 804246 - f 100 -23.1 -2.66695 | opp_overlap 804247, overlap 804245 804243 CCCTTCATGAAATAC GCAGGGGCCGGCTCCTT CCA AAGGAACCGGCCCCTGT TGTCGTTCGCCGCCG TERM 830 804247 - 804281 + F 100 -24.4 -3.50853 | opp_overlap 804246 804245 804243 CCTTCATGAAATACG CAGGGGCCGGCTCCTT CCA AAGGAACCGGCCCCTG TTGTCGTTCGCCGCC BAD_0642 804312 - 804836 + | N-acetyl transferase TERM 831 805361 - 805309 - g 73 -9.9 -3.57144 | gap 2, overlap 805311 CTCGGCACCCCGAAA TACGCGCGCG-TGCGCAT-GGGCGT CGGCC ACGCCCAACGCGGAGCCCACGCGCA CGACAACACCGTGAA TERM 832 805363 - 805311 - g 81 -14.1 -3.36515 | gap 1, overlap 805309 CGGCACCCCGAAATA CGCGCGCGTGCGCATGGGCGTCGG CCACGC CCAACGCGGA-GCCCACGCGCACG ACAACACCGTGAACT pth 804910 - 805509 + | peptidyl-tRNA hydrolase TERM 833 806498 - 806480 - g 73 -4.4 -4.59773 | overlap 806481 806482 TCCGACCCGGAAAAA CTTCGTCG CGC CGCCGACG ATCTGGCGAAAACCG TERM 834 806771 - 806747 - g 73 -4.2 -4.72007 | gap 1, overlap 806748 806749 GGTGACGAAAACAAA GC-GGCCTCCG GCAT CGAAGGACTGC TCGACGCCGGCTATG mfd 805499 - 809065 + | transcription-repair coupling factor eno 809189 - 810487 + | enolase TERM 835 810558 - 810525 - f 100 -15.4 -4.12532 | opp_overlap 810525 GCGTTGACATAGAAA TACCCGTCGTGTTC CAAGTC GAACGCGACGGGTA TTTTCGTTGCTATGA TERM 836 810525 - 810558 + F 100 -17.6 -4.4773 | opp_overlap 810525 GCGTTGACATAGAAA TACCCGTCGTGTTC CAAGTC GAACGCGACGGGTA TTTTCGTTGCTATGA TERM 837 810610 - 810594 - g 88 -2.1 -5.54894 | opp_overlap 810603, overlap 810603 810604 AAGGCACGAAAAAAA CCATCAC AAC GCGGCGG CGCCGGCCCGGTCGC BAD_0646 810570 - 811118 + | hypothetical protein BAD_0647 811120 - 811692 + | hypothetical protein TERM 838 811874 - 811847 - g 71 -5.4 -4.3898 | opp_overlap 811857, overlap 811848 811851 AGGATGTGGACAAAA CCCATCGCTTCG CCGA CGAGGCGTTGGC GCGCGCCTATGAGGC TERM 839 812272 - 812247 - g 76 -6.1 -4.62069 | GCGTCATCTGAAAAA CGACCCGCC GACCGAGG GGCAGATCG CCGAGGCGGTCGCGG BAD_0648 811705 - 812700 + | exopolyphosphatase-like protein TERM 840 812833 - 812858 + F 95 -14.1 -3.1811 | opp_overlap 812838, overlap 812833 812838 GCTGGAGGCACTTTT GGAAACCGCCA GAGA TGGCGGTTTTC CTTTATTCTCCAACG TERM 841 812833 - 812859 + F 93 -11.7 -4.30719 | gap 1, opp_overlap 812838, overlap 812833 812838 GCTGGAGGCACTTTT GGAAA-CCGCCA GAGA TGGCGGTTTTCC TTTATTCTCCAACGG TERM 842 812838 - 812853 + F 100 -10.4 -4.70353 | opp_overlap 812838, overlap 812833 812833 AGGCACTTTTGGAAA CCGCCA GAGA TGGCGG TTTTCCTTTATTCTC TERM 843 812853 - 812838 - f 74 -10.4 -3.54543 | opp_overlap 812833 812833 812838 AGGCACTTTTGGAAA CCGCCA GAGA TGGCGG TTTTCCTTTATTCTC BAD_0649 813040 - 813615 + | Cd efflux system component TERM 844 814465 - 814445 - g 70 -4.7 -4.57569 | GCAGGGCGCCAAAAA TGTATGCAA GGC TCGCATCCA ACAGCGACGTGCTCA sdaA 813649 - 815109 + | L-serine dehydratase fkbP 815162 - 815569 + | peptidyl-prolyl cis-trans isomerase greA 815608 - 816087 + | transcription elongation factor GreA TERM 845 816155 - 816105 - T 74 -6.9 -4.2558 | gap 1, opp_overlap 816107 816110, overlap 816108 816110 TACGTGTGACGAAAA CAAC-AGCCCGTTCCTCCATCGCA TTCG TACGATGAGGGGACGGGCTTATTT TGTTTTGTCCATGTG TERM 846 816107 - 816152 + T 100 -8.9 -5.19275 | opp_overlap 816105 816108 816110, overlap 816110 CGTGTGACGAAAACA ACAGCCCGTTCCTCCATCGCA TTCG TACGATGAGGGGACGGGCTTA TTTTGTTTTGTCCAT TERM 847 816151 - 816108 - T 93 -12.4 -4.25256 | opp_overlap 816107 816110, overlap 816105 816110 GTGTGACGAAAACAA CAGCCCGTTCCTCCATCGCA TTCG TACGATGAGGGGACGGGCTT ATTTTGTTTTGTCCA TERM 848 816110 - 816149 + T 100 -15 -4.66746 | opp_overlap 816110 816108 816105, overlap 816107 GTGACGAAAACAACA GCCCGTTCCTCCATCGCA TTCG TACGATGAGGGGACGGGC TTATTTTGTTTTGTC TERM 849 816149 - 816110 - T 95 -15 -3.72481 | opp_overlap 816107 816110, overlap 816108 816105 GTGACGAAAACAACA GCCCGTTCCTCCATCGCA TTCG TACGATGAGGGGACGGGC TTATTTTGTTTTGTC BAD_0653 817072 - 816185 - | hypothetical protein TERM 850 816555 - 816537 - G 76 -13.2 -3.09516 | overlap 816548 CCCGCGATGATGGAA TCACGCCA GAA TGGCGTGA GCGCGAAGGAAACGG BAD_0654 817165 - 818691 + | histidine kinase-like protein TERM 851 818752 - 818719 - T 100 -26.9 -3.13475 | opp_overlap 818719 GAATGGCATATGGAA GGGCCGGTCGGATTC CATC GAATCCGACCGGCCC TTCCATATGCCCTGA TERM 852 818719 - 818752 + T 100 -26.9 -3.12999 | opp_overlap 818719 GAATGGCATATGGAA GGGCCGGTCGGATTC CATC GAATCCGACCGGCCC TTCCATATGCCCTGA TERM 853 818798 - 818843 + T 76 -11.7 -3.08679 | gap 1 CATCTGCATGGCCTG CGAGCGACGTGCACGCATCGCG CGC CGCT-TGAGCGCGCGCCGCTCG TCTTCGCTCAGACCG wblE 819052 - 818774 - | WhiB-type transcription regulator BAD_0656 820919 - 819156 - | hypothetical protein TERM 854 819182 - 819200 + g 77 -11.7 -3.67597 | GGAATTCCGCGCATT GCACGGG ACATG CCCGTGC TTGTTGGATGAAGAC TERM 855 819715 - 819703 - G 84 -9.1 -4.54727 | TCGCTCAAAGCAAAA GGCAC ATG GTGCC ATGCCTCTCGCTGTG TERM 856 820973 - 821007 + r 71 -11.4 -2.8619 | opp_overlap 820983, overlap 821002 821004 CAATATGAGGGTTGT GGTCGGAGAATGTGGG TTA TCCACATCCTCCGGCG TGTCGTCAGTTTTGC BAD_0657 822365 - 821013 - | hypothetical protein TERM 857 821109 - 821084 - G 71 -6.2 -4.38154 | AGAGTTCGGAGAAAA GCTGGATG TTCTTCGCGT CATCCAGC AGAACGCACGATCCG TERM 858 821951 - 821939 - G 73 -9.1 -3.96452 | CAAGGAAAATGGAAA GGACG ATA CGTCC GACGCGAGGTCTTCT TERM 859 822275 - 822289 + g 88 -3.5 -5.48825 | GCGAGCGGGAGGAAT CCGTG GACGG CATGG TTTTTTTGCGTCCTG BAD_0658 823666 - 822431 - | transcriptional regulator TERM 860 823731 - 823699 - H 76 -11.9 -3.1372 | overlap 823697 CAGTGCCGACGAACA CCAGAGTCGCGGCGA TTG CCGCGGCGACTGCGG TCCTGACGTGATGCT whiB2 824099 - 824398 + | WhiB-type transcription regulator BAD_0660 824432 - 827536 + | hypothetical protein TERM 861 827906 - 827896 - g 93 -6.8 -5.24531 | ATGCTGGACAAAAAA GACG ACT CGTC CGATGACATCTTTGT BAD_0661 827533 - 829062 + | hypothetical protein BAD_0662 829527 - 829066 - | hypothetical protein BAD_0663 829571 - 830377 + | hypothetical protein BAD_0664 830418 - 831104 + | hypothetical protein BAD_0665 832185 - 831109 - | sensor protein TERM 862 832124 - 832164 + g 84 -10.6 -4.20084 | gap 2, opp_overlap 832121 832125 832127, overlap 832125 832127 GAAGAGAACAAACCA ATAGGGCGTTCGGT--ATCC AAC GGATTGACCGAACGCCCTGG TTTTGAATCAGTGGT TERM 863 832125 - 832163 + g 76 -14.1 -3.11569 | gap 2, opp_overlap 832125 832121 832127, overlap 832124 832127 AAGAGAACAAACCAA TAGGGCGTTCGGT--ATCC AAC GGATTGACCGAACGCCCTG GTTTTGAATCAGTGG TERM 864 832163 - 832125 - G 80 -11.9 -3.75295 | gap 2, opp_overlap 832124 832125 832127, overlap 832121 832127 AAGAGAACAAACCAA TAGGGCGTTCGGT--ATCC AAC GGATTGACCGAACGCCCTG GTTTTGAATCAGTGG TERM 865 832161 - 832127 - G 90 -14.5 -3.43568 | gap 2, opp_overlap 832125 832124 832127, overlap 832125 832121 GAGAACAAACCAATA GGGCGTTCGGT--ATCC AAC GGATTGACCGAACGCCC TGGTTTTGAATCAGT TERM 866 832127 - 832161 + g 80 -14.5 -3.11476 | gap 2, opp_overlap 832127 832125 832121, overlap 832125 832124 GAGAACAAACCAATA GGGCGTTCGGT--ATCC AAC GGATTGACCGAACGCCC TGGTTTTGAATCAGT BAD_0666 832960 - 832238 - | response regulator of two-component system TERM 867 832407 - 832441 + g 74 -12.2 -3.18274 | CGAGTGAGCACGGAC TTCGGTTTGCGGGCCA AAG TGGCCAGCAAATCAAA TTCCGTTGGGGTCAA glgB 835231 - 832976 - | glycogen branching enzyme TERM 868 835265 - 835279 + H 95 -3.4 -5.88061 | AAATGCTTGAAAATT GGCCCG TGT CGCGTC TTTTTTTGGTTTTTT TERM 869 835698 - 835682 - g 73 -4.4 -4.65916 | gap 1, overlap 835684 GCGATGTGAATAAAA TCGC-CG AAGT CGTGCGA GACCTCGCCCAGCGT BAD_0668 835369 - 835965 + | transcriptional regulator TERM 870 836025 - 836049 + G 95 -16.5 -3.76125 | TCGCGTCCCATGATG CAGGCAAGCCG TTA TGGCTTGCCTG TTTGCGTTGGGATGG ispF 835976 - 836452 + | 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase BAD_0670 837297 - 836461 - | ABC transporter permease TERM 871 836972 - 836959 - G 73 -4.5 -4.58283 | CAAGCGTGCGAAAAA CAGAC CCAT GCCTG TGGCGAACGCCAATA troB 838163 - 837300 - | ATP binding protein of ABC transporter TERM 872 838338 - 838298 - R 100 -14.9 -4.56597 | gap 1, opp_overlap 838301, overlap 838301 TGTTGCTGGGAAAAA GAATTCGCCGATGTCGGG GAATTG CTCGACATCGGCGAAT-C GGGGGGAGGGAGGAT TERM 873 838336 - 838301 - R 100 -17.7 -4.40561 | opp_overlap 838301, overlap 838298 TGCTGGGAAAAAGAA TTCGCCGATGTCGGG GAATTG CTCGACATCGGCGAA TCGGGGGGAGGGAGG BAD_0672 839431 - 838364 - | ABC transporter solute-binding protein folD 839577 - 840452 + | bifunctional methylenetetrahydrofolate dehydrogenase TERM 874 840470 - 840500 + F 100 -19.8 -4.88067 | TTCGCGATAGTGCTT TCGGGCGTGTCGTG ACA TGCGACACGCCCGA TTTTTGTGCATGGCT rpsA 840606 - 842078 + | 30S ribosomal protein S1 TERM 875 842125 - 842152 + F 100 -19.2 -3.76775 | opp_overlap 842125 TAAACCGCTGATAAA TGGCCCCGCACC TGAT GGTGTGGGGCCA TTTGCGTATGTTGCG TERM 876 842152 - 842125 - f 100 -17 -3.88583 | opp_overlap 842125 TAAACCGCTGATAAA TGGCCCCGCACC TGAT GGTGTGGGGCCA TTTGCGTATGTTGCG BAD_0675 842186 - 842839 + | dephospho-CoA kinase uvrB 842844 - 844934 + | excinuclease ABC subunit B TERM 877 845435 - 845415 - g 80 -11.1 -3.73775 | GTCACGGCCATCAAA CTCGTCACC GGG GGAGACGAG GACGAGGAATACCAT BAD_0677 844974 - 845957 + | hypothetical protein TERM 878 846013 - 846052 + F 78 -6.4 -4.77036 | gap 1, opp_overlap 846007 846025 CCTACGAAATTGTGA GCGCTCACAACACACCT AGTTCTG AGGTG-GAAGTGGGCGC TTTTTGCTAGTAAGC pyk 846056 - 847573 + | pyruvate kinase TERM 879 847603 - 847641 + F 100 -19.8 -4.59109 | opp_overlap 847595 847609, overlap 847606 CGTTAAACGCTGATT CCATAATCCTCCCATTGG TTC CCGATGGGAGGATTATTG TTTTTACGCGATGTC TERM 880 847606 - 847638 + F 100 -20.1 -4.40963 | opp_overlap 847595 847609, overlap 847603 TAAACGCTGATTCCA TAATCCTCCCATTGG TTC CCGATGGGAGGATTA TTGTTTTTACGCGAT TERM 881 847635 - 847609 - f 95 -15.2 -3.32963 | opp_overlap 847606 847603, overlap 847595 ACGCTGATTCCATAA TCCTCCCATTGG TTC CCGATGGGAGGA TTATTGTTTTTACGC TERM 882 848280 - 848256 - g 70 -4.2 -4.57569 | gap 1, opp_overlap 848256, overlap 848257 TGATTTGGTCAAAAA GGCCACGGGCG CTGG CGCC-ATGGCG TATGTCACCAAGCCG BAD_0679 847882 - 848646 + | hypothetical protein TERM 883 848708 - 848718 + G 91 -4.6 -5.53288 | GACGGCCATTCTTTG GCGT TCC GCGC TTTTTTTGCCTTACC polA 848636 - 851482 + | DNA polymerase I BAD_0681 851535 - 852440 + | hypothetical protein BAD_0682 852447 - 853070 + | MutT family pyrophosphate-releasing NTPase treX 853157 - 855301 + | glycogen operon protein GlgX BAD_0684 856560 - 855391 - | hypothetical protein TERM 884 856740 - 856779 + H 100 -18.8 -3.14963 | gap 1, opp_overlap 856740, overlap 856733 TCAGCCCGACAAAAA GCCCGGAGTTCCAA-TGGT TTT GCCACTTGGAATTCCGGGC TTCAATGATTGTGCG TERM 885 856779 - 856740 - H 100 -15.9 -4.84359 | gap 1, opp_overlap 856740 856733 TCAGCCCGACAAAAA GCCCGGAGTTCCAA-TGG TTTTG CCACTTGGAATTCCGGGC TTCAATGATTGTGCG TERM 886 857297 - 857311 + H 74 -11.4 -3.29013 | overlap 857292 GCGTAGAGCTGCGGC TGCGGC ACG GCCGCA TTCGGTTGTTGGGGT TERM 887 858216 - 858206 - g 70 -3.2 -4.61231 | CCATACGGGGAAAAA GACT CCA AGCC TGCCGCATATCCGAA TERM 888 858427 - 858445 + G 71 -8.8 -3.72893 | opp_overlap 858427, overlap 858414 CGCATTGGCCGGAAA CCACCACG CAA CCTGGTGG TTTGCTGCCGGGGTA TERM 889 858640 - 858624 - g 73 -8.7 -3.85698 | GCTTTCGCCGACAAA CCGACCA ATA TGATCGG CATCGGCCATTTACG BAD_0685 857574 - 858926 + | 3-phosphoshikimate 1-carboxyvinyltransferase TERM 890 858994 - 859046 + T 100 -33.7 -2.88544 | opp_overlap 858999, overlap 858999 GGACTCTTTTCGCCG CATAATGGGAGGGGCTTTCCGCGGG CTA TCCGCGGGAAGCCCCTCCCATTACG TGTCTAAGCCTGCGG TERM 891 858999 - 859041 + T 100 -32.2 -3.15999 | opp_overlap 858999, overlap 858994 CTTTTCGCCGCATAA TGGGAGGGGCTTTCCGCGGG CTA TCCGCGGGAAGCCCCTCCCA TTACGTGTCTAAGCC TERM 892 859041 - 858999 - T 100 -29.3 -3.28712 | opp_overlap 858999 858994 CTTTTCGCCGCATAA TGGGAGGGGCTTTCCGCGG GCTAT CCGCGGGAAGCCCCTCCCA TTACGTGTCTAAGCC guaA 860626 - 859064 - | bifunctional GMP synthase/glutamine amidotransferase protein BAD_0687 861083 - 863560 + | putative phosphoketolase TERM 893 863594 - 863619 + F 100 -19.1 -4.87626 | opp_overlap 863594 GATTGCTTGATAAAA GCCCCAAGGGA TTGT TCCCTTGGGGC TTTTTCGTATTACGG TERM 894 863619 - 863594 - f 100 -19.1 -4.3739 | opp_overlap 863594 GATTGCTTGATAAAA GCCCCAAGGGA TTGT TCCCTTGGGGC TTTTTCGTATTACGG pta 863763 - 865433 + | phosphate acetyltransferase TERM 895 865879 - 865846 - g 70 -10.3 -3.50853 | gap 1, overlap 865849 TCTGGTCAACGACAA GACCATCGGCCAGGTC AAG GACCTCGCCG-TGCTC GCCCCGCTGCACAAC ackA 865523 - 866752 + | acetate kinase TERM 896 866862 - 866805 - f 100 -28.7 -3.2048 | gap 1, opp_overlap 866806 866852, overlap 866806 866847 GGCAAACGGTATGAA TCTGCGCCGCCGTGCCTGA-TAATCGAT ATC ATCGGTCAATCAGGCACGGCGGCGCAGT GCGTTGGGCCCCCCT TERM 897 866806 - 866861 + F 100 -32.2 -2.52464 | gap 1, opp_overlap 866806 866805 866847, overlap 866852 GCAAACGGTATGAAT CTGCGCCGCCGTGCCTGA-TAATCGAT ATC ATCGGTCAATCAGGCACGGCGGCGCAG TGCGTTGGGCCCCCC TERM 898 866861 - 866806 - f 100 -32.2 -2.51966 | gap 1, opp_overlap 866806 866852, overlap 866805 866847 GCAAACGGTATGAAT CTGCGCCGCCGTGCCTGA-TAATCGAT ATC ATCGGTCAATCAGGCACGGCGGCGCAG TGCGTTGGGCCCCCC BAD_0690 866968 - 868788 + | membrane protein with acetylase function TERM 899 868842 - 868876 + T 100 -18.8 -3.25823 | opp_overlap 868842 GCCGTCGCATATGAA TGATCCCCATTCCG TGGAAAT CGGAATGGGGATCA TTCATATGCGGACGA TERM 900 868876 - 868842 - T 100 -18.8 -3.25823 | opp_overlap 868842 GCCGTCGCATATGAA TGATCCCCATTCCG TGGAAAT CGGAATGGGGATCA TTCATATGCGGACGA pbuX 870300 - 868909 - | xanthine/uracil permease xpt 871049 - 870345 - | xanthine phosphoribosyltransferase TERM 901 872205 - 872187 - g 87 -10.2 -4.42788 | overlap 872189 GTCAAGGCGACAAAA TCGTCGGC TAT GCCGCCGA CAACGCACAGCAGGA uvrD1 871127 - 873766 + | ATP-dependent DNA helicase PcrA TERM 902 874017 - 873999 - g 74 -11 -3.53012 | GTGTGTGCCGTCAAA GACATGCC CAT GGCATGCC ACTACACCGCTCGGG BAD_0694 873903 - 874301 + | hypothetical protein BAD_0695 874294 - 875514 + | hypothetical protein BAD_0696 875514 - 876329 + | ATP binding protein of ABC transporter TERM 903 876535 - 876557 + F 95 -14.2 -3.17075 | GAGAGGCTGGCTCAG CGTATGCCGG ACT TCGGCATACG TTCCGTTCAGACAAC rpsD 876599 - 877225 + | 30S ribosomal protein S4 TERM 904 877271 - 877308 + F 100 -21.5 -5.28826 | gap 1, opp_overlap 877276 TTTAAGGACATACAG CGA-AAGCCTCGCAGCCG TTA CGGTTGCGAGGCTTCTCG TTTTTTATGGCGTTT TERM 905 877302 - 877276 - f 100 -18 -3.75535 | opp_overlap 877271 GGACATACAGCGAAA GCCTCGCAGCCG TTA CGGTTGCGAGGC TTCTCGTTTTTTATG TERM 906 877384 - 877407 + G 74 -6 -4.57837 | gap 1, overlap 877386 877390 ATGTTGCTTCATCTT CATCTGGTCCG TCA CGGAC-AGACG TTTTTCAACCGATAT BAD_0698 877360 - 878043 + | hypothetical protein TERM 907 878052 - 878065 + F 90 -8.1 -4.8083 | CCAGTGAACGTATTT GCCAC AGTC GTGGC TTTTTACTAGTCTTA BAD_0699 878130 - 878519 + | secreted protein alaS 878844 - 881522 + | alanyl-tRNA synthetase BAD_0701 881533 - 881988 + | putative Holliday junction resolvase TERM 908 882174 - 882209 + G 85 -8.8 -4.59773 | opp_overlap 882167, overlap 882170 882141 GTCACAATCATCGCG GCTGCCGTCGTTGTCA TTCT TGTCGTCGTCGGCGGC TTTTTCGGCGTGCGC BAD_0702 882003 - 883190 + | hypothetical protein TERM 909 883226 - 883267 + G 72 -12.2 -3.01924 | opp_overlap 883251, overlap 883209 883217 ACGCGTGCATCGCGA TGCTTATCGCCCCGGCCA CGACAA TGGTCGGGGCGAACGGCG TCTTACCGGCGAATC rne 883225 - 883686 + | ribonuclease E aroC 883723 - 884916 + | chorismate synthase aroB 884925 - 886553 + | bifunctional shikimate kinase aroQ 886590 - 887039 + | 3-dehydroquinate dehydratase TERM 910 887064 - 887092 + F 100 -16.1 -4.72986 | TCCGTCATGGATTCA GCCGGATGCCT GTCTTTA AGGCATCCGGC TTTTTCGTGCCAATG amyA4 887201 - 888472 + | putative alpha-amylase TERM 911 888786 - 888770 - f 91 -3.7 -5.61596 | overlap 888772 ACTTGCAGAAAAAAA TTTTGCT TGC AGCAACA GGTTGCACTTCGGCA TERM 912 890416 - 890385 - g 79 -9.4 -4.22591 | overlap 890387 890407 AACAACGGCAAGAAA GAGAAGGACGTCAC CTAT ACGACGTCCCTCGC CGACGGCGAATACTG TERM 913 890414 - 890387 - g 73 -10.6 -3.70139 | overlap 890385 890407 CAACGGCAAGAAAGA GAAGGACGTCAC CTAT ACGACGTCCCTC GCCGACGGCGAATAC pulA 889023 - 894302 + | pullulanase TERM 914 894340 - 894370 + F 100 -24.1 -4.371 | opp_overlap 894342 CTCCTATTCCTGGAA GATGGGGCCGCGC ATGAA GCGCGGCCCCATC TTTTCATATAGTCCG TERM 915 894368 - 894342 - f 100 -20.9 -3.02511 | opp_overlap 894340 CCTATTCCTGGAAGA TGGGGCCGCGC ATGAA GCGCGGCCCCA TCTTTTCATATAGTC pyrG 894426 - 896087 + | CTP synthetase TERM 916 896152 - 896123 - f 74 -10.8 -3.61178 | opp_overlap 896123 TCGATTCATCGCAAA GCGGAAGACC GAATCTGCAT GGTCTTCCGC TTTTTTGTAAGGCAA TERM 917 896123 - 896152 + F 100 -11.5 -5.24129 | opp_overlap 896123 TCGATTCATCGCAAA GCGGAAGACCG AATCTGCA TGGTCTTCCGC TTTTTTGTAAGGCAA BAD_0710 896246 - 897766 + | ABC transporter TERM 918 898768 - 898749 - g 71 -5.6 -4.35524 | TCTGGAAATCGAAAA CGGCAACA TCAT CGGTGCCG GCCACGCCTCATCCG BAD_0711 897763 - 898995 + | ABC transporter BAD_0712 899011 - 899790 + | ABC transporter ATP-binding protein TERM 919 900390 - 900416 + G 74 -12.2 -3.21099 | ATCGCGCCGATTATC CGCCGCGCCCAC GAG GTGGGTGCCGTG TTCGTGCTCGACGCA BAD_0713 899787 - 901061 + | NifS-like aminotranferase TERM 920 901586 - 901634 + G 70 -10.1 -3.53224 | opp_overlap 901583 901586 901614 GGAGGGCATGAAGGA CGCCGTGGCCAAGGCTCTGGC CGCGAAA GCCTGAGCCTTCAACTCGGCG TTTGGAAAAACACTA BAD_0714 901068 - 901619 + | hypothetical protein BAD_0715 901724 - 902311 + | hypothetical protein TERM 921 902421 - 902364 - T 81 -3.8 -5.16151 | gap 5, opp_overlap 902376 902381, overlap 902372 902374 902381 CAAACGTAAGAAAAA CGGAACAACATACGAAAGGCGCGCCTCCC GAACG GGGAAGCGCGCCTTTCGTAT-T-A--C-G ACGTATGTCAGTCGT TERM 922 902418 - 902372 - T 100 -26.1 -3.86063 | opp_overlap 902376 902381, overlap 902364 902374 902381 AGAAAAACGGAACAA CATACGAAAGGCGCGCCTCCC GAACG GGGAAGCGCGCCTTTCGTATT ACGACGTATGTCAGT TERM 923 902416 - 902374 - T 100 -28.7 -3.49383 | opp_overlap 902376 902381, overlap 902372 902364 902381 AAAAACGGAACAACA TACGAAAGGCGCGCCTCCC GAACG GGGAAGCGCGCCTTTCGTA TTACGACGTATGTCA TERM 924 902376 - 902414 + T 100 -24.7 -3.0395 | opp_overlap 902374 902372 902364 902381, overlap 902381 AAACGGAACAACATA CGAAAGGCGCGCCTCCC GAACG GGGAAGCGCGCCTTTCG TATTACGACGTATGT TERM 925 902381 - 902409 + T 100 -17.4 -3.92324 | opp_overlap 902374 902372 902364 902381, overlap 902376 GAACAACATACGAAA GGCGCGCCTCCC GAACG GGGAAGCGCGCC TTTCGTATTACGACG TERM 926 902409 - 902381 - T 100 -19.6 -3.97056 | opp_overlap 902381 902376, overlap 902374 902372 902364 GAACAACATACGAAA GGCGCGCCTCCC GAACG GGGAAGCGCGCC TTTCGTATTACGACG glgC 903673 - 902429 - | glucose-1-phosphate adenylyltransferase tnsR 904731 - 903853 - | tRNA/rRNA methyltransferase TERM 927 904386 - 904404 + g 76 -10.2 -3.72576 | GGCAGACCTCTTCGA CGCTGGGC AGG GACCAGCG TTTCATCGCGGCAAG TERM 928 904788 - 904771 - H 100 -11.3 -4.87592 | opp_overlap 904771 TCAGATACAAGAAAA CCCCTTG TCTC CAAGGGG TTTATTCCGGTGTCC TERM 929 904771 - 904788 + H 88 -11.3 -4.19678 | opp_overlap 904771 TCAGATACAAGAAAA CCCCTTG TCTC CAAGGGG TTTATTCCGGTGTCC BAD_0718 905008 - 905805 + | hypothetical protein BAD_0719 905900 - 906235 + | hypothetical protein TERM 930 906669 - 906656 - g 71 -9.5 -3.73775 | overlap 906657 CCCATCGTGAGGAAA CCGCC GACA GGCGG CGTCCTCACGTGCCG BAD_0720 906280 - 907413 + | PhoH-like protein BAD_0721 907414 - 907959 + | putative metalloprotease TERM 931 909182 - 909158 - g 73 -10.7 -3.56821 | AGGAGATCTTCGAAA TCGACATCGAC GAG GACGACGTCGA CACGGTATACGGTCT TERM 932 909319 - 909298 - g 75 -8.1 -4.16016 | gap 1 GGACGCCGCAAGAAA GTGTCCACCA TCG TGGTGGA-AC CGGCCCACGTCGAGG BAD_0722 908008 - 909426 + | hypothetical protein era 909419 - 910417 + | GTP-binding protein Era TERM 933 910462 - 910484 + T 95 -14.8 -3.55444 | CGCTCACTTCGCCTA CGGTCAGCCC ACT GGGCTGCCCG TTTGACGGCTCAGCC TERM 934 910508 - 910526 + T 95 -6 -5.42259 | opp_overlap 910505 910502, overlap 910497 910511 CTCAGCCAAGCAGCT TGAGAAGC TGG GCTTCTGA TTTTTTTCCGGGTGG TERM 935 910576 - 910552 - T 100 -14.3 -4.44667 | opp_overlap 910552 GGTGGGAACAATAAA GCCTGCCGC TGTTTAT GCGGCAGGC TTTCTTATGCTCTAA TERM 936 910552 - 910576 + T 100 -14.3 -4.3767 | opp_overlap 910552 GGTGGGAACAATAAA GCCTGCCGC TGTTTAT GCGGCAGGC TTTCTTATGCTCTAA fadD2 912647 - 910611 - | long-chain-fatty-acid-CoA ligase TERM 937 912587 - 912597 + g 75 -8.2 -4.1673 | opp_overlap 912578 912577, overlap 912577 CGAAATCGTTGCCCA GGCG CAA CGCC TTTCTTGCGAGATTA TERM 938 913350 - 913332 - g 76 -12.4 -3.30124 | CGTGATGGGCTACAA GGCCGCCA TCG TGGCAGCC AACGCGTACGGTTCC pntA 912883 - 914028 + | NAD(P) transhydrogenase subunit alpha part 1 TERM 939 915303 - 915264 - g 73 -9.2 -3.97042 | opp_overlap 915277 915289, overlap 915265 GCACCATGAAGGAAA CCTCCGCCGACGATCTGG CCGT CCAGCTCGTCTACGCAGA GAAGGTCATCTTCGT TERM 940 915584 - 915596 + G 70 -10.5 -3.55444 | opp_overlap 915569 915568, overlap 915570 CCGGCCGCCCGCAAG CCGGG CAC CCCGG TTTCCGGCATGCCGA pntB 914339 - 915784 + | NAD(P) transhydrogenase subunit beta TERM 941 915845 - 915812 - f 72 -11 -3.05844 | opp_overlap 915786 915782 915815, overlap 915785 915815 TCGCCTACGCGAAGA TCAGGCCCTTCCTC TTTTTG GAGGAAGGGCCTTT TGTTATTGCGCAAGT TERM 942 915815 - 915842 + F 100 -17.8 -4.89477 | opp_overlap 915785 915812 915815, overlap 915786 915782 CCTACGCGAAGATCA GGCCCTTCCTCT TTTT GGAGGAAGGGCC TTTTGTTATTGCGCA TERM 943 915842 - 915815 - f 91 -17.1 -2.75074 | opp_overlap 915786 915782 915815, overlap 915785 915812 CCTACGCGAAGATCA GGCCCTTCCTC TTTTTG GAGGAAGGGCC TTTTGTTATTGCGCA TERM 944 915884 - 915914 + F 100 -11.3 -5.01732 | GACAGGTATGGGGGT GTGGATAGGTGGA AATTG TCCACTTATTCAC TTTTTTCAAAGGATT BAD_0727 915985 - 917358 + | putative riboflavin-specific deaminase BAD_0728 917477 - 918826 + | putative Na+-driven multidrug efflux pump ydfL 918823 - 919683 + | hypothetical protein BAD_0730 920105 - 919707 - | hypothetical protein BAD_0731 920471 - 920878 + | hypothetical protein TERM 945 920900 - 920927 + F 100 -15.6 -5.29445 | TTGTTCTTATATGGA GGGCCATCCTGC AAAA GTGGGATGGCCC TTTTTGTTGTTCAGG BAD_0732 920979 - 921530 + | MarR family regulatory protein TERM 946 922016 - 922033 + G 73 -4.7 -4.62069 | overlap 922003 GTCGGTCCACCGTTG GGCGGCC TGTT GGTCACC TTTTTGGGATGGCGC TERM 947 922200 - 922220 + G 78 -10.5 -3.86995 | opp_overlap 922203, overlap 922203 TGCTATTCTCCATCA CAATCAGCG CGC TGCTGATTG TTCTTATGAGTTTGC BAD_0733 921527 - 922903 + | putative drug resistance transporter crcB2 923045 - 923590 + | protein crcB homolog 2 TERM 948 923741 - 923772 + G 76 -9.4 -4.05033 | TTGCCGGATTCCTGG CAGGCGTGATTGCA GGTC TGTACTCACGCCGG TTTCTGTCGGATCCC crcB3 923590 - 923964 + | protein crcB homolog 3 BAD_0736 924139 - 924762 + | hypothetical protein BAD_0737 924762 - 925448 + | cobalt ABC transporter permease BAD_0738 925442 - 926989 + | ATP binding protein of ABC transporter BAD_0739 926974 - 927642 + | hypothetical protein BAD_0740 930222 - 927670 - | excinuclease subunit A TERM 949 929413 - 929427 + g 89 -7.1 -5.11033 | overlap 929412 CGTGAAGTCGAGTTC GGCGA AATCG TCGCC TTTTTTCGGCTTGTA BAD_0741 931764 - 930763 - | hypothetical protein rplY 932020 - 932634 + | 50S ribosomal protein L25 TERM 950 932682 - 932724 + F 70 -7.1 -4.12405 | gap 1, opp_overlap 932689, overlap 932689 GCCTGCCATATCGGT AGTACAAGGTCCCTGTGTGT GAAA ACACGTGGGGACCTT-TGCG TTTCCTTATGTTTCT TERM 951 932689 - 932718 + F 90 -12.9 -3.89938 | opp_overlap 932689, overlap 932682 ATATCGGTAGTACAA GGTCCCTGTGTGT GAAA ACACGTGGGGACC TTTGCGTTTCCTTAT TERM 952 932826 - 932806 - f 85 -12.5 -3.50893 | overlap 932800 932807 AAGTACATACCAGAA CCCGGCGCC ACA AGCGCCGGA GACCAATAACCGCTG TERM 953 932825 - 932807 - f 78 -13.8 -2.69813 | overlap 932800 932806 AGTACATACCAGAAC CCGGCGCC ACA AGCGCCGG AGACCAATAACCGCT ilvE 932882 - 934009 + | branched-chain amino acid aminotransferase TERM 954 934106 - 934122 + F 73 -5 -4.65078 | overlap 934108 GGTCTGACAATGTAC GTGCCG CCCTC CGGCTC TTTTATTGCAGCTCT BAD_0744 934165 - 934944 + | hypothetical protein TERM 955 935011 - 934976 - T 100 -22 -5.22943 | opp_overlap 934982, overlap 934979 ACGAAATGTAAAAAA GAAGAAGCCCCGCAGG TTTT CCTGCGGGGCTTCTTA CAAGCTGTGAGTTAC TERM 956 935008 - 934979 - T 100 -23.7 -4.68528 | opp_overlap 934982, overlap 934976 AAATGTAAAAAAGAA GAAGCCCCGCAGG TTTT CCTGCGGGGCTTC TTACAAGCTGTGAGT TERM 957 934982 - 935005 + T 100 -19.6 -3.63073 | opp_overlap 934979 934976 TGTAAAAAAGAAGAA GCCCCGCAGG TTTT CCTGCGGGGC TTCTTACAAGCTGTG rpsT 935293 - 935033 - | 30S ribosomal protein S20 TERM 958 935242 - 935267 + g 71 -9.7 -3.8062 | CCACGTTACGCTTGT GCGCCTTCTCG TTGG TGAGAACGCGC TTCTTCTGCGACTTG lepA 935591 - 937330 + | GTP-binding protein LepA hemN 937338 - 938501 + | oxygen-independent coproporphyrinogen III oxidase TERM 959 942442 - 942426 - g 72 -10.9 -3.29461 | overlap 942415 942429 CAAGGCGCTCGACAA CAAGCTC ATC GAGCTTG CCCAGCCAGCCCTTG TERM 960 942702 - 942729 + G 72 -12.8 -3.05384 | gap 1, opp_overlap 942720 GTCCGGCGGCCGCAT GGTGGT-CCGTCC AGA GGACGGCATCACC TTCGATCCGCACGAG gltB 938638 - 943284 + | glutamate synthase [NADPH] large subunit gltD 943286 - 944833 + | glutamate synthase subunit beta TERM 961 944897 - 944858 - f 100 -20.1 -3.18681 | gap 1, opp_overlap 944859 944861, overlap 944861 TTGTAAGGGTATGAA CGAGGTGGCCCGGCTCGC GAATA GTGAGCCGGGCCACCT-G TTTTTCACCCGAAAT TERM 962 944859 - 944897 + F 100 -22.5 -4.56775 | opp_overlap 944858 944861, overlap 944861 TGTAAGGGTATGAAC GAGGTGGCCCGGCTCGC GAATA GTGAGCCGGGCCACCTG TTTTTCACCCGAAAT TERM 963 944895 - 944861 - f 100 -22.9 -2.79023 | opp_overlap 944859 944861, overlap 944858 TAAGGGTATGAACGA GGTGGCCCGGCTCGC GAATA GTGAGCCGGGCCACC TGTTTTTCACCCGAA TERM 964 944861 - 944895 + F 100 -25.1 -3.90048 | opp_overlap 944861 944858, overlap 944859 TAAGGGTATGAACGA GGTGGCCCGGCTCGC GAATA GTGAGCCGGGCCACC TGTTTTTCACCCGAA BAD_0750 944955 - 945416 + | hypothetical protein TERM 965 945479 - 945426 - f 95 -8.5 -4.91109 | gap 2, opp_overlap 945435, overlap 945435 GTCTGATCACAAAAA CGATGGA-AA-GCGGTGAGACAA CCAGAAGCAT TTGTCTCACCGCTTTTTCTATCG GATTTTAGGTATGCG TERM 966 945468 - 945435 - f 90 -12.6 -3.78018 | opp_overlap 945435, overlap 945426 CAAAAACGATGGAAA GCGGTGAGACAA CCAGAAGCAT TTGTCTCACCGC TTTTTCTATCGGATT TERM 967 945435 - 945468 + F 100 -12.6 -4.98522 | opp_overlap 945435 945426 CAAAAACGATGGAAA GCGGTGAGACAA CCAGAAGCAT TTGTCTCACCGC TTTTTCTATCGGATT glgA 945457 - 946908 + | glycosyltransferase TERM 968 947006 - 946972 - f 95 -14.5 -3.6445 | gap 2, opp_overlap 946969, overlap 946964 AGAATAATCCTGAAA TGCCTCCTGCCGACGCA CTA TGC-T-GGCAGGAGGCA TCATCGTATCCAAGT BAD_0752 946991 - 947896 + | ABC transporter ATP-binding protein BAD_0753 948057 - 949112 + | hypothetical protein BAD_0754 949127 - 949771 + | hypothetical protein BAD_0755 949854 - 950306 + | hypothetical protein metE 950488 - 952794 + | 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase metF 952837 - 953676 + | 5,10-methylenetetrahydrofolate reductase TERM 969 953742 - 953695 - f 100 -14.2 -4.22375 | opp_overlap 953702, overlap 953697 AGACGATGCAACAAA CACGAAAGGGATGATTTCCGGC AACT GTCGGAAACCGTCCCTTTCGCC ATACTTACGGATATG TERM 970 953740 - 953697 - f 100 -19 -3.70709 | opp_overlap 953702, overlap 953695 ACGATGCAACAAACA CGAAAGGGATGATTTCCGGC AACT GTCGGAAACCGTCCCTTTCG CCATACTTACGGATA TERM 971 953702 - 953735 + F 89 -13.9 -3.59315 | opp_overlap 953697 953695 GCAACAAACACGAAA GGGATGATTTCCGGC AACT GTCGGAAACCGTCCC TTTCGCCATACTTAC glnE 953768 - 956878 + | glutamate-ammonia-ligase adenylyltransferase TERM 972 957171 - 957137 - g 82 -11.5 -3.9392 | gap 1, opp_overlap 957137 TCCCATCGTAAAGAA GTGGCACACA-CCTGC GAAG GCAGGGTGCTTGCCAC TTTGTTTTATGAGCC TERM 973 957137 - 957171 + G 100 -9.3 -4.77173 | gap 1, opp_overlap 957137 TCCCATCGTAAAGAA GTGGCACACA-CCTGC GAAG GCAGGGTGCTTGCCAC TTTGTTTTATGAGCC pyrB 956987 - 958000 + | aspartate carbamoyltransferase catalytic subunit pyrI 957997 - 958419 + | aspartate carbamoyltransferase regulatory subunit pyrC 958424 - 959842 + | dihydroorotase pyrF 959842 - 960804 + | orotidine 5'-phosphate decarboxylase pyrK 960844 - 961662 + | dihydroorotate dehydrogenase electron transfer subunit pyrD 961665 - 962612 + | dihydroorotate dehydrogenase pyrE 962649 - 963344 + | orotate phosphoribosyltransferase TERM 974 963441 - 963398 - T 83 -14.7 -2.62933 | opp_overlap 963398 963404, overlap 963404 TAATCTCGGATATGA CAGAAAGGCACTGTGCTGC TTTCGG GCAGTACAGTGCCTTTTCG TTGTGGTTCCTCTGT TERM 975 963398 - 963441 + T 100 -17.6 -3.55889 | opp_overlap 963398 963404, overlap 963404 TAATCTCGGATATGA CAGAAAGGCACTGTGCTGCT TTCG GGCAGTACAGTGCCTTTTCG TTGTGGTTCCTCTGT TERM 976 963435 - 963404 - T 100 -14.5 -4.11404 | opp_overlap 963404 963398, overlap 963398 CGGATATGACAGAAA GGCACTGTGCTGC TTTCGG GCAGTACAGTGCC TTTTCGTTGTGGTTC TERM 977 963404 - 963435 + T 100 -17.4 -4.52781 | opp_overlap 963398 963404, overlap 963398 CGGATATGACAGAAA GGCACTGTGCTGCT TTCG GGCAGTACAGTGCC TTTTCGTTGTGGTTC cpsY 963979 - 963464 - | LysR-type transcriptional regulator cpsY 964386 - 963928 - | LysR-type transcriptional regulator BAD_0768 965327 - 964548 - | alpha beta hydrolase BAD_0769 965871 - 965578 - | GDSL-like lipase/acylhydrolase domain-containing protein TERM 978 966074 - 966052 - H 72 -12 -2.61383 | overlap 966020 966019 966051 ATCGTGACGCACAAC TCCGCGATCG CCC CCATCGCGGA CAGGGTGATCCGCAT TERM 979 967299 - 967276 - g 73 -5.2 -4.62203 | gap 1, overlap 967267 967277 967290 TCGAAACAAGCAAAA CCGTGCTCGAC AAA GTCG-GCGCGA CGCTCGGCAAATGGG TERM 980 968250 - 968220 - g 73 -4.7 -4.58283 | gap 1 GAACTGCGCGAAAAA CCGGCGAGCCTA CTGCTGCC CAAGC-CGCCGG CCAAAGGCTCGAAAA TERM 981 968811 - 968795 - g 77 -7.9 -4.39386 | overlap 968796 GGTAAACGACGAAAA CGGCGCG CAA CGCACCA TCAAAGTCGCCGGCA BAD_0770 966459 - 969449 + | ABC transporter BAD_0771 971240 - 969465 - | hypothetical protein TERM 982 971322 - 971312 - H 85 -2.4 -5.52807 | overlap 971313 AACAACAAACAAAAA CGGC ATG GACG CCAAACAAGAAAACG BAD_0772 971347 - 972048 + | ABC transporter TERM 983 972327 - 972346 + F 100 -13.6 -5.65927 | overlap 972317 972314 CGCAGGAGCTTTTTA GCCCTTGG TTTT CCAAGGGC TTTTTTGTTTCCGTA BAD_0773 972927 - 973550 + | hypothetical protein TERM 984 973844 - 973828 - g 73 -4.3 -4.62069 | TGCGGAGTTCAAAAA CAAGGTC GTC GCCCTCG CCAAAGGACTTATCG fadD4 973664 - 975493 + | long-chain-fatty-acid--CoA ligase TERM 985 975551 - 975503 - T 100 -28.4 -3.56568 | GAATGATGTTCGAAA TATGGTGGGGGCCGGTGACATC CGAGT GATGCCATCGGCCCCCACCATA TCCGGAAGAATCCCG BAD_0775 977092 - 975584 - | hypothetical protein TERM 986 975861 - 975880 + g 70 -4.2 -4.4518 | opp_overlap 975850 975854, overlap 975863 CTGATATAGGCCCCA TAGCCGGT GATG ATCGGCCA TTTTGCGTTTTCCTT TERM 987 976693 - 976707 + g 74 -7.1 -4.37711 | TCTCGGCGACAGGCG CCACC ACCAA GGTGG TTTTGGCTTTCGTGG TERM 988 977163 - 977194 + r 71 -10.1 -3.54424 | opp_overlap 977163 TCCGGACGTCAAAAA GCCCGTACGCGTG TGTGAT TGCGCATACGGGC TTTCGACAGCTCAGA TERM 989 977194 - 977163 - R 95 -10.9 -4.62069 | opp_overlap 977163 TCCGGACGTCAAAAA GCCCGTACGCG TGTGTGATTG CGCATACGGGC TTTCGACAGCTCAGA icd1 978434 - 977214 - | isocitrate dehydrogenase TERM 990 978249 - 978291 + g 71 -6.9 -4.18018 | gap 1 TTCGCGCTGGATGGC CTTCGCCG-CGTCGACGGTC ACCT GATCGTCGGTGGCGTCGCGG TTTTCGATGCCCAGA BAD_0777 978549 - 979688 + | inositol-5-monophosphate dehydrogenase TERM 991 979724 - 979758 + F 100 -15.8 -4.23529 | opp_overlap 979719 979729, overlap 979726 GATAAAAAAGTTATC CACAATCCCTCCGTCG ACT TGACGGGGGGATTGTC TTTATGTATTAATGT TERM 992 979726 - 979756 + F 100 -18.4 -3.70645 | opp_overlap 979719 979729, overlap 979724 TAAAAAAGTTATCCA CAATCCCTCCGTCG ACT TGACGGGGGGATTG TCTTTATGTATTAAT TERM 993 979753 - 979729 - f 75 -11.4 -3.38966 | opp_overlap 979726 979724, overlap 979719 AAAAGTTATCCACAA TCCCTCCGTC GACTT GACGGGGGGA TTGTCTTTATGTATT BAD_0778 979836 - 980486 + | hypothetical protein TERM 994 980561 - 980525 - f 100 -16 -4.62872 | gap 1, opp_overlap 980525 AGGAATCTGCAAAAA GCCCTTGGCGTCGA-TG TTCG CAGTCGATGCCAAGGGC TTTCAGCGTGCCTTA TERM 995 980525 - 980561 + F 100 -18.2 -3.58269 | gap 1, opp_overlap 980525 AGGAATCTGCAAAAA GCCCTTGGCGTCGA-TG TTCG CAGTCGATGCCAAGGGC TTTCAGCGTGCCTTA fadD3 980604 - 982643 + | long-chain-fatty acid CoA ligase def2 982811 - 983131 + | peptide deformylase 2 TERM 996 983154 - 983192 + F 100 -23.3 -4.96106 | opp_overlap 983145 983156, overlap 983156 AGCGAACGACGATTC AACCATGGGGCCACGTC AGAAA GACGTGGCCCCATGGTA TTTTTAGTATTTGTG TERM 997 983190 - 983156 - f 100 -25.9 -3.11687 | opp_overlap 983156 983154, overlap 983145 CGAACGACGATTCAA CCATGGGGCCACGTC AGAAA GACGTGGCCCCATGG TATTTTTAGTATTTG TERM 998 983156 - 983190 + F 100 -25.9 -4.07993 | opp_overlap 983145 983156, overlap 983154 CGAACGACGATTCAA CCATGGGGCCACGTC AGAAA GACGTGGCCCCATGG TATTTTTAGTATTTG rpsB 983318 - 984211 + | 30S ribosomal protein S2 tsf 984287 - 985162 + | elongation factor Ts TERM 999 985216 - 985243 + F 100 -18.6 -5.44119 | TTGGCATATCTCCAA TGTCCGCAATCC AACA GGATTGCGGACA TTTTTTTGCACTAAA pyrH 985342 - 986091 + | uridylate kinase frr 986144 - 986698 + | ribosome recycling factor cdsA 987085 - 987741 + | phosphatidate cytidylyltransferase BAD_0786 987767 - 988927 + | hypothetical protein TERM 1000 989703 - 989738 + G 75 -8.3 -4.27316 | gap 2 ATTTTCCGCCGGCAA TCGAGGCGG-GCGC-CG ATGC CGTGCTCGCTGCCTCGA TTTTCCATTACGGCA hisF 989042 - 989812 + | imidazole glycerol phosphate synthase subunit HisF hisI 989876 - 990283 + | phosphoribosyl-AMP cyclohydrolase trpE 990280 - 991836 + | anthranilate synthase component I TERM 1001 991955 - 991939 - g 73 -4.3 -4.70583 | GCGATCAAGAGAAAA CAACGTG CCG CTCGCTG AGGTCAAGCGGATGG trpBC 991880 - 993973 + | bifunctional indole-3-glycerol phosphate synthase/tryptophan synthase subunit beta TERM 1002 994315 - 994280 - g 78 -2.5 -5.06103 | overlap 994269 ACAATGGTGAAAAAA TCGCCAACGTATTCA AAGCGG TGGAAACAGTGGCGA ACGCCGGGGGAGTGC trpA 993991 - 994866 + | tryptophan synthase subunit alpha TERM 1003 994930 - 994883 - f 76 -10 -3.82946 | gap 1, opp_overlap 994888, overlap 994885 994887 994888 CCAGTCCAAAGACAA CATACTGGTAGTCCACGTAC-CA TAT CGTATACGTGGACTACCATCAGG AAACCATGACACTTG TERM 1004 994928 - 994885 - f 77 -11.2 -3.49634 | gap 1, opp_overlap 994888, overlap 994883 994887 994888 AGTCCAAAGACAACA TACTGGTAGTCCACGTAC-CA TAT CGTATACGTGGACTACCATCA GGAAACCATGACACT TERM 1005 994926 - 994887 - f 75 -11.6 -3.31428 | gap 1, opp_overlap 994888, overlap 994885 994883 994888 TCCAAAGACAACATA CTGGTAGTCCACGTAC-CA TAT CGTATACGTGGACTACCAT CAGGAAACCATGACA TERM 1006 994925 - 994888 - f 83 -15.1 -2.58134 | gap 1, opp_overlap 994888, overlap 994887 994885 994883 CCAAAGACAACATAC TGGTAGTCCACGTAC-CA TAT CGTATACGTGGACTACCA TCAGGAAACCATGAC lgt 994936 - 995946 + | prolipoprotein diacylglyceryl transferase rpe 995972 - 996646 + | ribulose-phosphate 3-epimerase hisE 996643 - 996939 + | phosphoribosyl-ATP pyrophosphatase TERM 1007 996949 - 996973 + F 86 -7.1 -5.00616 | CTGTGAGAAACCCGG GGCCATGCC AGTTGAA GGTGTGGCC TTTTTTAGAGGAGAA hisG 996991 - 997842 + | ATP phosphoribosyltransferase TERM 1008 997933 - 997879 - g 71 -8.7 -3.75292 | gap 1, opp_overlap 997887, overlap 997883 997885 997887 ACTGATTATTAAGAA GC-AATACAGTCCGGAACCGCGAGAC ATCT ATTTCACGGTTCCGAACTTCATCAGC CTGTTGAGAATCATT TERM 1009 997928 - 997883 - g 73 -10.5 -3.56544 | opp_overlap 997887, overlap 997879 997885 997887 ATTATTAAGAAGCAA TACAGTCCGGAACCGCGAGAC ATCT ATTTCACGGTTCCGAACTTCA TCAGCCTGTTGAGAA TERM 1010 997926 - 997885 - g 72 -10.9 -3.3516 | opp_overlap 997887, overlap 997883 997879 997887 TATTAAGAAGCAATA CAGTCCGGAACCGCGAGAC ATCT ATTTCACGGTTCCGAACTT CATCAGCCTGTTGAG TERM 1011 997924 - 997887 - g 78 -13.5 -3.23251 | opp_overlap 997887, overlap 997885 997883 997879 TTAAGAAGCAATACA GTCCGGAACCGCGAGAC ATCT ATTTCACGGTTCCGAAC TTCATCAGCCTGTTG pgsA 997856 - 998467 + | CDP-diacylglycerol--glycerol-3- phosphate 3-phosphatidyl-transferase BAD_0797 998475 - 999446 + | hypothetical protein BAD_0798 999446 - 999778 + | hypothetical protein BAD_0799 999785 - 1000612 + | hypothetical protein TERM 1012 1001145 - 1001133 - g 71 -6.2 -4.39318 | opp_overlap 1001132 1001133 CAAGGAAATCGAAAA GCGC ATGCA GCGC ATTATCAAGTCCTCC thrS 1000672 - 1002807 + | threonyl-tRNA synthetase TERM 1013 1002846 - 1002894 + F 100 -19 -4.46212 | opp_overlap 1002846 1002853, overlap 1002847 1002849 CACGCGACCATGAAC CGTGAAACGGCGCACGAATCTC GACAA GAGGTTTGTGCGCCGTTTCTCA TTTTCTCATCGAGAA TERM 1014 1002894 - 1002846 - f 89 -16.8 -2.52834 | opp_overlap 1002846 1002847 1002849, overlap 1002853 CACGCGACCATGAAC CGTGAAACGGCGCACGAATCTC GACAA GAGGTTTGTGCGCCGTTTCTCA TTTTCTCATCGAGAA TERM 1015 1002847 - 1002893 + F 100 -22.5 -3.27406 | opp_overlap 1002846 1002853, overlap 1002846 1002849 ACGCGACCATGAACC GTGAAACGGCGCACGAATCTC GACAA GAGGTTTGTGCGCCGTTTCTC ATTTTCTCATCGAGA TERM 1016 1002849 - 1002891 + F 100 -23.7 -3.20028 | opp_overlap 1002846 1002853, overlap 1002847 1002846 GCGACCATGAACCGT GAAACGGCGCACGAATCTC GACAA GAGGTTTGTGCGCCGTTTC TCATTTTCTCATCGA TERM 1017 1002887 - 1002853 - f 95 -14.3 -3.61764 | opp_overlap 1002849 1002847 1002846, overlap 1002846 CCATGAACCGTGAAA CGGCGCACGAATCTC GACAA GAGGTTTGTGCGCCG TTTCTCATTTTCTCA TERM 1018 1003050 - 1003071 + G 72 -10.9 -3.34398 | gap 1, overlap 1003048 ATCGTCGTGGCCATC GCCA-CCGGT GTG ACCGGATGGC TATTTGGGGGAGCGG TERM 1019 1003410 - 1003391 - g 76 -5.7 -4.63527 | gap 1, opp_overlap 1003396, overlap 1003393 CTATGAGGTGAAAAA CGGCATCG CCACT CG-TGCCG ATCGCTTGACCATCA BAD_0801 1002921 - 1003583 + | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase TERM 1020 1003846 - 1003806 - g 76 -10.5 -3.73534 | gap 1 CAAGCTGATCAAGAA CATCGAGATCGCAG-CAC GTATGG GTGGCGGCGATCCCGACG GCAACCCGTCCCTGT BAD_0802 1003699 - 1004469 + | hypothetical protein TERM 1021 1004490 - 1004524 + G 73 -13.6 -2.70932 | gap 1 CGTGATTATTCTTGG CGTCGACCCCG-GGC TGACTC GCTGCGGGGTCGGCG TGATTGAAGCCGGCG TERM 1022 1004551 - 1004533 - g 72 -13.1 -3.05384 | opp_overlap 1004533 GTCGGCGTGATTGAA GCCGGCG CATAC CGCCGGC TTTCTTTTATCCACG TERM 1023 1004533 - 1004551 + G 100 -13.1 -4.77173 | opp_overlap 1004533 GTCGGCGTGATTGAA GCCGGCG CATAC CGCCGGC TTTCTTTTATCCACG TERM 1024 1004710 - 1004700 - g 78 -6.8 -4.63218 | overlap 1004708 GTTCGCGCAAGAAAA CCGT AAC ACGG TGCTGGGAACCGCAC ruvC 1004476 - 1005057 + | Holliday junction resolvase ruvA 1005105 - 1005722 + | holliday junction ATP-dependent DNA helicase ruvA ruvB 1005719 - 1006807 + | Holliday junction DNA helicase B BAD_0806 1006864 - 1007277 + | hypothetical protein TERM 1025 1007293 - 1007329 + F 100 -15.4 -4.56597 | gap 1, opp_overlap 1007305, overlap 1007295 TTTCTTTGATTTTTA G-ACGGCGAAAATCTCA TTTT TGAGGTTTTCGCCGTTC TTTTTCGCACGGGAA TERM 1026 1007295 - 1007326 + F 100 -18.2 -4.40561 | opp_overlap 1007305, overlap 1007293 TCTTTGATTTTTAGA CGGCGAAAATCTCA TTTT TGAGGTTTTCGCCG TTCTTTTTCGCACGG apt 1007393 - 1007974 + | adenine phosphoribosyltransferase sucC 1008026 - 1009213 + | succinyl-CoA synthetase beta chain TERM 1027 1009392 - 1009379 - g 91 -8.1 -4.74103 | CCCTGAAGCCAAAAA TGGCG AGGA CGCCA CCATTCACGTGTTCG sucD 1009215 - 1010138 + | succinyl-CoA synthetase subunit alpha TERM 1028 1010281 - 1010255 - g 72 -12.3 -3.09015 | opp_overlap 1010258, overlap 1010258 GTCATATCCATGGAA GAAGGCGGGGA CAATC TCTCCGCCTTC TCGGTGCCTCTTACC TERM 1029 1011436 - 1011422 - g 74 -11.4 -3.45027 | overlap 1011420 AGCCGTGAGGAAACA CGTGCG CTT CGCACG GTCGCCTCGAACAAC BAD_0810 1010138 - 1011523 + | hypothetical protein TERM 1030 1012940 - 1012888 - g 72 -12.6 -3.02511 | gap 2, opp_overlap 1012888, overlap 1012907 1012916 TCGAGCGTGCCAACA CGCTGGCTGACGGAGCCAACCGCACC AAG GGAGCGG-TGGCCGCGTCCGAC-GCG TTCTTCCCGTTCGCC TERM 1031 1012888 - 1012940 + G 73 -10.4 -3.68222 | gap 2, opp_overlap 1012888 1012907 1012916 TCGAGCGTGCCAACA CGCTGGCTGACGGAGCCAACCGCACC AAG GGAGCGG-TGGCCGCGTCCGAC-GCG TTCTTCCCGTTCGCC purH 1011573 - 1013099 + | bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase TERM 1032 1013194 - 1013150 - T 100 -21.6 -3.85698 | opp_overlap 1013153, overlap 1013153 TCGCGGCGCGATAAA TGACGTGGCGTCCGAAACCA TTCGC TGGTTTCGGACGCCACGTTT TATTATTATGATTGC TERM 1033 1013153 - 1013191 + T 100 -27.7 -4.9645 | opp_overlap 1013153 1013150 CGGCGCGATAAATGA CGTGGCGTCCGAAACCA TTCGC TGGTTTCGGACGCCACG TTTTATTATTATGAT TERM 1034 1013191 - 1013153 - T 100 -27.7 -3.00946 | opp_overlap 1013153, overlap 1013150 CGGCGCGATAAATGA CGTGGCGTCCGAAACCA TTCGC TGGTTTCGGACGCCACG TTTTATTATTATGAT TERM 1035 1013395 - 1013367 - T 100 -16 -4.1899 | TTAGGCCATGTAAAA GCCGCCACCACG GTAAT CGCGGTGACGGC CATCATAACAGGACT BAD_0812 1014389 - 1013454 - | membrane channel protein TERM 1036 1013565 - 1013595 + g 100 -14.1 -5.1356 | overlap 1013590 GGCTATGGTCTCCAG CGTTTCGGAATCC TGCTC GGCTTCCGAAACG TTTTTCTTGGTGCCG BAD_0813 1014738 - 1014478 - | putative fatty-acyl-CoA racemase BAD_0814 1015104 - 1014880 - | hypothetical protein TERM 1037 1015483 - 1015459 - g 93 -16.5 -3.64822 | opp_overlap 1015450 1015457 1015456, overlap 1015432 AGCTCGTCACCGAAA CCGTCGGCGAA TTC TTCACCGACGG CCATTTCGACATCAG TERM 1038 1015839 - 1015823 - g 89 -12.3 -4.07568 | TGTGGGTGCGGAAAA TGTCGCG GCA CGCGACA AGGCCGATTCGAAAG engA 1015374 - 1017401 + | bifunctional cytidylate kinase/GTP-binding protein TERM 1039 1017416 - 1017464 + F 100 -24 -3.7104 | gap 1, opp_overlap 1017420, overlap 1017417 1017420 ACCACCGGAACTGTT AGAAGAGGGGCGTGCGCC-TGGT TCAG ACCATGGCGCACGCCCCTCTGCC TTATTGAATCTGGGT TERM 1040 1017417 - 1017463 + F 100 -27.5 -2.82142 | gap 1, opp_overlap 1017420, overlap 1017416 1017420 CCACCGGAACTGTTA GAAGAGGGGCGTGCGCC-TGGT TCAG ACCATGGCGCACGCCCCTCTGC CTTATTGAATCTGGG TERM 1041 1017420 - 1017460 + F 100 -27.8 -2.66869 | gap 1, opp_overlap 1017420, overlap 1017417 1017416 CCGGAACTGTTAGAA GAGGGGCGTGCGCC-TGGT TCAG ACCATGGCGCACGCCCCTC TGCCTTATTGAATCT TERM 1042 1017460 - 1017420 - f 100 -27.8 -3.33261 | gap 1, opp_overlap 1017420 1017417 1017416 CCGGAACTGTTAGAA GAGGGGCGTGCGCC-TGGT TCAG ACCATGGCGCACGCCCCTC TGCCTTATTGAATCT TERM 1043 1018150 - 1018120 - f 100 -15.5 -5.00412 | overlap 1018144 AAACATAACGAAAAA CCCGCCGTTTCAA TACTG TGGAAACGGCGGG GCGACGGGCTTTCTT TERM 1044 1018965 - 1018939 - g 95 -11.7 -4.5032 | CAGACCAATAAGAAA TTCCATCAGGA AGACA TCCCGATGGAA ATCATCCAGCATCAG TERM 1045 1019479 - 1019465 - g 77 -11.4 -3.56318 | overlap 1019463 TCCGCAATAAGAAGA CGGTCG ACC CGACCG ATCCGACCAGCGAGC ugpA 1018486 - 1019916 + | UTP-glucose-1-phosphate uridylyltransferase BAD_0817 1020059 - 1021972 + | hypothetical protein TERM 1046 1023007 - 1022996 - g 76 -7.2 -4.56597 | opp_overlap 1022998, overlap 1022998 GTGGTGTCCGAAAAA CGGC CCGT GCCG TTGGAACAGCATGTG TERM 1047 1024187 - 1024169 - g 95 -11 -4.57073 | GAGCTTCGCGAAAAA GACAGGGA CCA TCCCTGCC GCAAATGCCCCGATA TERM 1048 1024286 - 1024245 - g 74 -11.7 -3.53012 | gap 1, opp_overlap 1024236 GGTGGGCGCGTGAAA TGCGTGAATTGGAACGTGTG CAG CAC-CGCTACGATTCACGCA CCGGCTCCGTGGCAC BAD_0818 1022273 - 1024921 + | helicase BAD_0819 1025030 - 1025377 + | hypothetical protein TERM 1049 1025402 - 1025430 + F 80 -8.8 -4.16814 | opp_overlap 1025405, overlap 1025403 1025405 GAACGACACTTGAAC GAATGCCCGGTC ATTGA GACCGGGCATAA TTGTTTCTGTCATCA TERM 1050 1025403 - 1025429 + F 76 -12.3 -3.09365 | opp_overlap 1025405, overlap 1025402 1025405 AACGACACTTGAACG AATGCCCGGTC ATTGA GACCGGGCATA ATTGTTTCTGTCATC TERM 1051 1025427 - 1025405 - f 95 -14.9 -3.36785 | opp_overlap 1025403 1025402 1025405 CGACACTTGAACGAA TGCCCGGTC ATTGA GACCGGGCA TAATTGTTTCTGTCA TERM 1052 1025405 - 1025427 + F 91 -14.9 -3.09322 | opp_overlap 1025405, overlap 1025403 1025402 CGACACTTGAACGAA TGCCCGGTC ATTGA GACCGGGCA TAATTGTTTCTGTCA BAD_0820 1025483 - 1026196 + | hydrolase or phosphatase TERM 1053 1026228 - 1026263 + T 100 -17.7 -5.47159 | opp_overlap 1026247 GCTGTAGGCCAGTTA CGTGGTTGCTGTCGC AATATC GTGGCAGCAACCACG TTTTTATTTATTGAG BAD_0821 1026622 - 1026377 - | anaerobic C4-dicarboxylate transport protein TERM 1054 1026620 - 1026640 + g 74 -6.2 -4.56597 | gap 1, opp_overlap 1026601 1026597 1026619 1026622, overlap 1026602 GATGATCGACCAACG CACCG-GAT GCAC ATCGCGGTG TTTTTGGGAAAACAG BAD_0822 1027405 - 1026761 - | hypothetical protein TERM 1055 1027494 - 1027454 - R 100 -20 -4.41548 | gap 1 CTACACGCCATAAAA CAATCGCCTATGAGCTTCC ATTC GGA-GCCCATAGGCGATTG AAGGAAAACCGTTAC garA 1027976 - 1027539 - | signal transduction protein TERM 1056 1028048 - 1028067 + H 71 -8.6 -3.82824 | overlap 1028049 ACGAATCATACACTG TGAACGGT ATTT ACCGTTCG TTCTTGTCGATGATG TERM 1057 1028315 - 1028286 - H 100 -15.1 -5.06414 | opp_overlap 1028286 GCCGGGGAACAAAAA GCCTGGAACGC TTTTAATC GCGTTCCAGGC TTTTTCAAGAAGGAT TERM 1058 1028286 - 1028315 + H 100 -15.1 -4.56775 | opp_overlap 1028286 GCCGGGGAACAAAAA GCCTGGAACGC TTTTAATC GCGTTCCAGGC TTTTTCAAGAAGGAT TERM 1059 1028508 - 1028528 + H 77 -3.9 -5.06411 | overlap 1028511 TTCTTGCTGGCGTGC TGTGACGCA CCT TGCGTCTTG TTTGTTTTCTTTTCT TERM 1060 1028511 - 1028525 + H 91 -10 -4.53966 | overlap 1028508 TTGCTGGCGTGCTGT GACGCA CCT TGCGTC TTGTTTGTTTTCTTT TERM 1061 1028745 - 1028733 - H 89 -3.3 -5.67283 | overlap 1028734 AATGGAAACAAAAAA CCGGC AAA ACCGA GCTGTGATAACGGTG BAD_0824 1029300 - 1030127 + | hypothetical protein TERM 1062 1030193 - 1030167 - T 100 -11.5 -5.58454 | opp_overlap 1030162 1030167 CTCAGACGAAAAAAA TCCCGGCCGCC TTACG GATGGCCGGGA TTCGCTTTATTTACG TERM 1063 1030167 - 1030193 + T 80 -12.3 -3.41807 | gap 1, opp_overlap 1030167, overlap 1030162 CTCAGACGAAAAAAA TCCCGGCCG-CC TTAC GGATGGCCGGGA TTCGCTTTATTTACG bacA 1031104 - 1030220 - | undecaprenyl-diphosphatase TERM 1064 1030803 - 1030789 - G 70 -10 -3.51329 | GACCGGCAATCAGAA TCGGCA GCG TGCCGA TGATGATGAACCAAC BAD_0826 1031273 - 1032064 + | hypothetical protein TERM 1065 1032096 - 1032136 + T 100 -18.6 -4.39166 | opp_overlap 1032096 1032099 ACGCCAGATGTGAAA GAAGTCCGTATCCCAA GGTTATGAG TTGGGATACGGACTTC TTTTCATATGTCCCG TERM 1066 1032136 - 1032096 - T 100 -18.6 -3.63805 | opp_overlap 1032096, overlap 1032099 ACGCCAGATGTGAAA GAAGTCCGTATCCCAA GGTTATGAG TTGGGATACGGACTTC TTTTCATATGTCCCG TERM 1067 1032133 - 1032099 - T 100 -14.5 -3.95378 | opp_overlap 1032096, overlap 1032096 CCAGATGTGAAAGAA GTCCGTATCCCAA GGTTATGAG TTGGGATACGGAC TTCTTTTCATATGTC dnaJ 1033324 - 1032173 - | chaperone protein DnaJ TERM 1068 1033243 - 1033262 + g 72 -2 -4.82667 | CGGGATGGTATTTGC GGCTCATC TTTC GATACGCC TTTTTGATCTCGTCG hrcA 1034504 - 1033377 - | heat-inducible transcription repressor TERM 1069 1034593 - 1034619 + H 100 -19.6 -2.57013 | overlap 1034589 ACTTCTTTTAATGTT TTAGCACTCCGG CGC CCGGAGTGCTAA TCGGTTCGCTTCCAG tkt 1034879 - 1036987 + | transketolase TERM 1070 1037026 - 1036993 - f 72 -11.7 -2.82933 | opp_overlap 1036994 CGCCAAGTGATGATA CGGGGAGGGACAC GACAGCAT GTGCCCCTCCCCT TTCACCGATAAACAA TERM 1071 1036994 - 1037025 + F 89 -13.7 -3.55444 | opp_overlap 1036993 GCCAAGTGATGATAC GGGGAGGGACACG ACAGCA TGTGCCCCTCCCC TTTCACCGATAAACA tal 1037077 - 1038180 + | transaldolase TERM 1072 1038255 - 1038217 - T 79 -7.5 -4.51196 | gap 1, opp_overlap 1038222, overlap 1038208 1038218 1038219 GTTAAACGGATAAAA GC-CGAGAGGTCTCCATC TTTT GATGGAGACCTCTTTTAC GTATGCCGGAATAAT TERM 1073 1038252 - 1038219 - T 75 -12.5 -2.57274 | opp_overlap 1038222, overlap 1038208 1038218 1038217 TAAACGGATAAAAGC CGAGAGGTCTCCATC TTTT GATGGAGACCTCTTT TACGTATGCCGGAAT TERM 1074 1038222 - 1038249 + T 100 -18.6 -4.2349 | opp_overlap 1038219 1038218 1038217 ACGGATAAAAGCCGA GAGGTCTCCATC TTTT GATGGAGACCTC TTTTACGTATGCCGG TERM 1075 1038323 - 1038301 - T 100 -14.9 -5.20783 | ACGGAAAGACAAAAA GGCCGCGAT ATCAA ATCGCGGCC ATAATCGAAAGAAAA BAD_0831 1039883 - 1038351 - | bifunctional HTH-domain-containing protein/aminotransferase TERM 1076 1039194 - 1039215 + g 72 -10.9 -3.28712 | gap 1, opp_overlap 1039187 1039186 CGGATAATCCGGCGA CGGC-ACGAG TAC CTCGTCGCCG TTGTCCAGCAACGCG TERM 1077 1039931 - 1039914 - R 75 -3.5 -4.94058 | gap 1 TCAATTTAAACAAAA GCTAGTTC AAA GAA-TAGC ACGACAGGGCACCAA BAD_0832 1040886 - 1040038 - | hypothetical protein TERM 1078 1040960 - 1040923 - R 100 -24.4 -3.49475 | opp_overlap 1040919 TCTAGCCGGAGACAA GTTTGGCCCATGACCG TGAAGC CGGTCATGGGCCAAAC CAAATTACGTCAATC secG 1041276 - 1040974 - | preprotein translocase subunit SecG tpi 1042115 - 1041321 - | triosephosphate isomerase TERM 1079 1042223 - 1042192 - R 100 -15.2 -4.323 | opp_overlap 1042191 GCGAAATACGCAAAA GGTGCTCCCCCACC CACT GATGAGGAAGCACC CCTTCATGATTCTGA pgk 1043446 - 1042241 - | phosphoglycerate kinase TERM 1080 1043567 - 1043518 - R 89 -13.8 -3.71883 | opp_overlap 1043524 1043529, overlap 1043529 TAATACAAGCCCAAA CGAACAAAAAACACCATACGAC GGAAAA GTCGCATGGTGTTTTGTTTCCG GAAACGAAAATCAGG TERM 1081 1043524 - 1043561 + r 71 -10 -3.53012 | opp_overlap 1043518 1043529, overlap 1043529 AAGCCCAAACGAACA AAAAACACCATACGAC GGAAAA GTCGCATGGTGTTTTG TTTCCGGAAACGAAA TERM 1082 1043556 - 1043529 - R 100 -12.1 -5.59655 | opp_overlap 1043529 1043524, overlap 1043518 CAAACGAACAAAAAA CACCATACGAC GGAAAA GTCGCATGGTG TTTTGTTTCCGGAAA TERM 1083 1043529 - 1043556 + r 100 -9.9 -4.86731 | opp_overlap 1043518 1043529, overlap 1043524 CAAACGAACAAAAAA CACCATACGAC GGAAAA GTCGCATGGTG TTTTGTTTCCGGAAA BAD_0836 1044528 - 1043578 - | hypothetical protein BAD_0837 1045615 - 1044683 - | hypothetical protein aroE 1046553 - 1045615 - | shikimate 5-dehydrogenase uvrC 1048856 - 1046619 - | excinuclease ABC subunit C TERM 1084 1047353 - 1047366 + g 70 -3.7 -4.59773 | opp_overlap 1047352 1047353, overlap 1047340 CTCGGATGGCGAAAC GGCGG TACT CCGAC TTTTTCGCGATCGCG uvrA 1051945 - 1048958 - | excinuclease ABC subunit A TERM 1085 1049172 - 1049226 + g 71 -8.4 -4.11216 | opp_overlap 1049191 1049194, overlap 1049173 AATACGAGCAGCAGT TTGCGTACGTCCTCGAAATGCAGGCC GGT GGTCGGCTCGTCGAGGATGTACACGG TTTTGCCGGTGGAAC TERM 1086 1051569 - 1051549 - G 73 -10.3 -3.64703 | overlap 1051550 TCTGGTCGATCGAAA CCGCGGGGC TCA GCCCCTCGA TGAAGTCGACGTCCG BAD_0841 1052887 - 1052021 - | hypothetical protein BAD_0842 1056703 - 1053257 - | hypothetical protein TERM 1087 1054453 - 1054502 + g 71 -6.5 -4.19506 | gap 3 CGTCGAAATCGGAGT CGC-CATGCATGTCGAGCCATGCC TGTTC GGCCTGGA-CGGCATGC-TGCGCG TTTTCCAATTCCGCT BAD_0843 1057554 - 1056715 - | hypothetical protein BAD_0844 1059053 - 1057557 - | hypothetical protein TERM 1088 1059680 - 1059725 + GH 100 -18.3 -4.16279 | gap 1, opp_overlap 1059680 1059685, overlap 1059678 GGCGGAATGAAAAAA CG-GAAGGACGCCCCTTCCGGA GTT TCCGGAAGAGGCGTCCCCCACG TTTTCGGATCGTGTC TERM 1089 1059725 - 1059680 - gH 100 -24.9 -5.26875 | gap 1, opp_overlap 1059678 1059680, overlap 1059685 GGCGGAATGAAAAAA CG-GAAGGACGCCCCTTCCGGA GTT TCCGGAAGAGGCGTCCCCCACG TTTTCGGATCGTGTC TERM 1090 1059719 - 1059685 - gH 100 -26.6 -3.54687 | opp_overlap 1059678 1059680, overlap 1059680 AATGAAAAAACGGAA GGACGCCCCTTCCGGA GTT TCCGGAAGAGGCGTCC CCCACGTTTTCGGAT recJ 1059467 - 1059763 + | single-stranded-DNA-specific exonuclease BAD_0846 1059736 - 1059984 + | protein TrkB involved in potassium or sodium transport BAD_0847 1060075 - 1060443 + | hypothetical protein TERM 1091 1060497 - 1060449 - T 74 -2.5 -5.08824 | overlap 1060452 1060454 1060455 CGGCGACTGAAAAAA CAAGACCGCCGGCATC-G-GATTCC ATT GGATTCGCCGGTGCCGGCGA-CT-G CCGGAAATACAAGAA TERM 1092 1060495 - 1060452 - T 73 -5.3 -4.64763 | gap 3, overlap 1060449 1060454 1060455 CGACTGAAAAAACAA GACCGCCGGCATC-G-GATTCC ATT GGATTCGCCGGTGCCGGCGA-C TGCCGGAAATACAAG TERM 1093 1060494 - 1060454 - T 76 -9 -3.92369 | gap 2, overlap 1060452 1060449 1060455 ACTGAAAAAACAAGA CCGCCGGCATC-G-GATTCC ATT GGATTCGCCGGTGCCGGCGA CTGCCGGAAATACAA TERM 1094 1060530 - 1060515 - T 85 -6.8 -4.95302 | opp_overlap 1060515 GGAAATACAAGAAAA GCTCCC TCCC AGGAGC TTTCGTTTTGTGGAG TERM 1095 1060515 - 1060530 + T 71 -6.1 -4.26881 | opp_overlap 1060515 GGAAATACAAGAAAA GCTCC CTCCCA GGAGC TTTCGTTTTGTGGAG TERM 1096 1060671 - 1060692 + T 78 -6.5 -4.56597 | gap 1, opp_overlap 1060660 1060658 AGGAGCGTCCGCCAT CGCG-CAAGC CCG GCGTGTCGCG TTTTTGCGGCGCCGG BAD_0848 1061742 - 1060732 - | hypothetical protein TERM 1097 1062110 - 1062062 - H 89 -13.8 -3.67597 | opp_overlap 1062065 1062067, overlap 1062067 CTGCTCAGCGAATAA CGGAAGCTCCCGCCTTCCACGC GGAAG GCGGGAAAGGCGGGAGCTCTTA TGGGAAGACTAAGGC TERM 1098 1062065 - 1062107 + H 100 -17.7 -3.29144 | opp_overlap 1062062 1062067, overlap 1062067 CTCAGCGAATAACGG AAGCTCCCGCCTTCCACGC GGAAG GCGGGAAAGGCGGGAGCTC TTATGGGAAGACTAA TERM 1099 1062105 - 1062067 - H 100 -22.5 -3.29459 | opp_overlap 1062065 1062067, overlap 1062062 CAGCGAATAACGGAA GCTCCCGCCTTCCACGC GGAAG GCGGGAAAGGCGGGAGC TCTTATGGGAAGACT TERM 1100 1062067 - 1062105 + H 100 -20.3 -3.21395 | opp_overlap 1062067 1062062, overlap 1062065 CAGCGAATAACGGAA GCTCCCGCCTTCCACGC GGAAG GCGGGAAAGGCGGGAGC TCTTATGGGAAGACT TERM 1101 1062684 - 1062728 + G 72 -11.3 -3.2794 | overlap 1062685 CCCATCACCGTCGTA TCGGTATGCGTCGCCGCCGTG GCA TGCGCTGTCGGCGCGTACCGG TTCGTCTACCTGCCA BAD_0849 1062569 - 1062889 + | hypothetical protein TERM 1102 1062926 - 1062896 - T 70 -9 -3.70149 | opp_overlap 1062896 CCGATATGACGCAAA GCGTTCGGCCAC GCTGCTT GCAGCCGAACAC GACGTCACGGCTTCC TERM 1103 1063254 - 1063215 - T 77 -4.3 -4.88736 | gap 1, opp_overlap 1063238 CAGCATTGATAAAAA GCGGGCCTACGCGTCC TGATCACGC GGA-ACGCAAACCCGC TTTCGATGGCATAGT BAD_0850 1064022 - 1063234 - | putative ABC transporter BAD_0851 1064544 - 1066145 + | ATP binding protein of ABC transporter TERM 1104 1066175 - 1066214 + T 100 -26.7 -3.04501 | opp_overlap 1066182, overlap 1066182 TTTCCGACACGCATA TGGGAAAGCCCGGACGA ATCAGA TCGTCCGGGCTTTCCCA TATTGAACGGTTCCT TERM 1105 1066182 - 1066207 + T 100 -16.2 -3.66803 | opp_overlap 1066182, overlap 1066175 CACGCATATGGGAAA GCCCGGACGA ATCAGA TCGTCCGGGC TTTCCCATATTGAAC TERM 1106 1066207 - 1066182 - T 100 -16.2 -3.64103 | opp_overlap 1066175 1066182 CACGCATATGGGAAA GCCCGGACGA ATCAGA TCGTCCGGGC TTTCCCATATTGAAC BAD_0852 1067271 - 1066246 - | cation transporter yxjG_1 1067326 - 1068537 + | hypothetical protein TERM 1107 1068601 - 1068572 - T 88 -13.6 -3.46212 | opp_overlap 1068572 ATCAGCTATAAGGAA GGGCTATCCGTC TTGTTC GGCGGATAGCCC TTTGTTTGTTTGCCG TERM 1108 1068572 - 1068601 + T 100 -15.8 -4.78326 | opp_overlap 1068572 ATCAGCTATAAGGAA GGGCTATCCGTC TTGTTC GGCGGATAGCCC TTTGTTTGTTTGCCG BAD_0854 1069438 - 1068635 - | putative carboxymuconolactone decarboxylase merR 1069918 - 1069490 - | regulatory protein TERM 1109 1069526 - 1069543 + g 70 -3.4 -4.72007 | GCCGGGCTGTTTCTT GACGTT TTCGAT GACGTC TTTGTTTTCCTCGAG BAD_0856 1071125 - 1070175 - | choloylglycine hydrolase TERM 1110 1070953 - 1070981 + g 73 -10.2 -3.57144 | overlap 1070954 1070967 TCGGCCATGACCACG CCCACGCCGATC ACCGC GTTCGGCGTGGC TTTGCCGCTCGCGCC TERM 1111 1070954 - 1070980 + g 73 -13.7 -2.74144 | overlap 1070953 1070967 CGGCCATGACCACGC CCACGCCGATC ACCGC GTTCGGCGTGG CTTTGCCGCTCGCGC TERM 1112 1070967 - 1071003 + g 79 -12.3 -3.45023 | gap 1, overlap 1070954 1070953 GCCCACGCCGATCAC CGCGTTCGGCGTG-GC TTTGCC GCTCGCGCCGAACACG TTGTCGTAGTGGTAG TERM 1113 1071262 - 1071281 + r 100 -12.2 -5.09895 | opp_overlap 1071262 TTGAAAATGAAAAAA TCCCCTTG TTTC CAAGGGGA TTTTTTGAATGGCTC TERM 1114 1071281 - 1071262 - R 100 -12.2 -5.46698 | opp_overlap 1071262 TTGAAAATGAAAAAA TCCCCTTG TTTC CAAGGGGA TTTTTTGAATGGCTC gcp 1072498 - 1071455 - | metalloendopeptidase Gcp rimI 1073037 - 1072495 - | ribosomal-protein-alanine N-acetyltransferase BAD_0859 1073818 - 1073048 - | hypothetical protein BAD_0860 1074495 - 1073923 - | hypothetical protein BAD_0861 1075511 - 1074492 - | hypothetical protein BAD_0862 1077227 - 1075515 - | putative transmembrane protein related to ComA TERM 1115 1076562 - 1076586 + g 70 -10 -3.54424 | opp_overlap 1076550, overlap 1076580 GAACGCCTCCTGCAT CATGCCGATG GCGCG CATCGGCAGG TTTGGCGGCCTGACG BAD_0863 1077985 - 1077224 - | hypothetical protein TERM 1116 1077455 - 1077482 + g 76 -6.2 -4.65916 | gap 1, overlap 1077473 CCCGTCATGGCTGTC CGGTGTGGACGCG TCC TGCGTCGGC-CCG TTTTCTTGCGGTGCC TERM 1117 1077473 - 1077501 + g 77 -8.1 -4.29326 | gap 1, overlap 1077455 TGTGGACGCGTCCTG CGTCGGC-CCGT TTTCTT GCGGTGCCGGCG TTTGTTCCGTTTGCG TERM 1118 1078022 - 1077971 - G 95 -13.2 -4.08767 | gap 1, opp_overlap 1077979 1078020, overlap 1077977 GTGAGTGCCGCAAAA TGCA-AATATGCCCATGCATCCAAC ATT GGAGGATGCATGGGCATACTGTCCA GCCGAAACGGCTCCT TERM 1119 1078015 - 1077977 - G 100 -19 -3.92659 | opp_overlap 1077979, overlap 1077971 GCCGCAAAATGCAAA TATGCCCATGCATCCAAC ATT GGAGGATGCATGGGCATA CTGTCCAGCCGAAAC TERM 1120 1077979 - 1078013 + g 83 -17.2 -2.62184 | opp_overlap 1077977 1077971 CGCAAAATGCAAATA TGCCCATGCATCCAAC ATT GGAGGATGCATGGGCA TACTGTCCAGCCGAA TERM 1121 1078047 - 1078103 + r 74 -11.6 -3.21395 | opp_overlap 1078050 1078095, overlap 1078035 1078047 1078050 GCTCCTGTGGTCGGA GAACGCGGGTT-ATCCACATTCCTGGCG TGT CGCCATG-GTGCGGAAGAACCCGCGTCC TCTTATGCGGGCCGT TERM 1122 1078100 - 1078050 - R 78 -11.9 -3.28712 | opp_overlap 1078035 1078050 1078047 1078047, overlap 1078095 CCTGTGGTCGGAGAA CGCGGGTT-ATCCACATTCCTGGCG TGT CGCCATGG-TGCGGAAGAACCCGCG TCCTCTTATGCGGGC TERM 1123 1078050 - 1078100 + r 72 -11.9 -2.80074 | opp_overlap 1078050 1078095, overlap 1078035 1078047 1078047 CCTGTGGTCGGAGAA CGCGGGTT-ATCCACATTCCTGGCG TGT CGCCATG-GTGCGGAAGAACCCGCG TCCTCTTATGCGGGC leuS 1081103 - 1078131 - | leucyl-tRNA synthetase TERM 1124 1079085 - 1079106 + g 71 -9.4 -3.84406 | gap 1, opp_overlap 1079079 1079080, overlap 1079086 GATGTACAAGTCCAC G-CCGCCGG ACTTG CCGGCGGTC TTGTTGTGGTCCGGA TERM 1125 1079086 - 1079104 + g 79 -13.1 -3.50808 | opp_overlap 1079079 1079080, overlap 1079085 ATGTACAAGTCCACG CCGCCGG ACTTG CCGGCGG TCTTGTTGTGGTCCG TERM 1126 1081073 - 1081084 + g 76 -7.2 -4.45083 | overlap 1081072 CGGATTCGTTCGGTT GCGC CTGC GCGC TTTTCTCAGTGTCAC BAD_0865 1082060 - 1081176 - | solute binding protein of ABC transporter system corA 1083016 - 1082066 - | magnesium/cobalt transporter CorA TERM 1127 1082169 - 1082185 + g 74 -12.3 -3.16921 | GGCTTGTCCGTGAGG GGCATGC CGA GCATGCC TTCCTGGAAGTTCAT BAD_0867 1084006 - 1083230 - | phosphoglycerate mutase TERM 1128 1084163 - 1084140 - R 100 -13.2 -5.29846 | AACGGTAAAGAAAAA GGCTTCCGAA TCTC TCCGGAAGCC TTCCAATCGTGGAGC BAD_0868 1085431 - 1084355 - | hypothetical protein TERM 1129 1085194 - 1085234 + g 84 -10.4 -4.1585 | gap 1, overlap 1085188 CGCTCTTGCCGGCAC CGTCCGTACCGTCCTTGTC GTTG GTCACGAACGGTACGG-CG TTTTGCAGCTTCTCC BAD_0869 1086234 - 1085539 - | hypothetical protein TERM 1130 1086004 - 1086027 + g 77 -11.6 -3.59979 | GAGCGGGTCGGCGAA CGCGTGGGCG GTGG CGGCCGCGCG TTTGAGATCGGAGCA TERM 1131 1086387 - 1086356 - R 86 -9.5 -4.34402 | gap 1, opp_overlap 1086356 CGGCGCATACCAAAA CGTGCCTT-CCGCA GGATT TTCGGGAAGGCACG TTTCGATGATGGATG TERM 1132 1086356 - 1086387 + r 76 -10.2 -3.68827 | gap 1, opp_overlap 1086356 CGGCGCATACCAAAA CGTGCCTT-CCGCAG GAT TTTCGGGAAGGCACG TTTCGATGATGGATG BAD_0870 1086815 - 1086408 - | hypothetical protein BAD_0871 1088200 - 1086818 - | bifunctional protein glmU TERM 1133 1087806 - 1087818 + g 70 -4.7 -4.46212 | GTGGTGAGCACGGTC GCGCC GTT GCCGC TTTTCTCGTGGAAGG BAD_0872 1088874 - 1088335 - | hypothetical protein TERM 1134 1088793 - 1088779 - G 78 -4.2 -4.81814 | overlap 1088780 ATGACCATAATAAAA CCGCAT CTC ACGCGA CTTCGGACTTGGCAC BAD_0873 1089005 - 1090012 + | reductase TERM 1135 1090073 - 1090122 + T 100 -20.8 -3.34043 | opp_overlap 1090077, overlap 1090074 1090077 CGGACGGAACCGCAA CAAATGAGCCGGGCGCGTACGA CATCGA TCGTACGCGCCCGGCTCATGGC TTATGCGGTCGTGGA TERM 1136 1090074 - 1090121 + T 100 -24.3 -2.60212 | opp_overlap 1090077, overlap 1090073 1090077 GGACGGAACCGCAAC AAATGAGCCGGGCGCGTACGA CATCGA TCGTACGCGCCCGGCTCATGG CTTATGCGGTCGTGG TERM 1137 1090118 - 1090077 - T 100 -31.1 -4.20918 | opp_overlap 1090074 1090073 1090077 CGGAACCGCAACAAA TGAGCCGGGCGCGTACGAC ATCG ATCGTACGCGCCCGGCTCA TGGCTTATGCGGTCG TERM 1138 1090077 - 1090118 + T 100 -30.4 -2.60079 | opp_overlap 1090077, overlap 1090074 1090073 CGGAACCGCAACAAA TGAGCCGGGCGCGTACGA CATCGA TCGTACGCGCCCGGCTCA TGGCTTATGCGGTCG BAD_0874 1091111 - 1090146 - | hypothetical protein TERM 1139 1090867 - 1090889 + g 85 -6.9 -4.77778 | overlap 1090869 1090870 TTCTCTTTTCTTGGA TACGCCGGC GGACG GCCGGCATG TTTTCTGTGTTTGTT TERM 1140 1091802 - 1091750 - g 100 -29.5 -4.81249 | overlap 1091743 CGTGAAATGGAAAAA TGGGTTCCGTGTTTTCCCGAAAGTC CTG GGCCTTCGGAAAAACACGGAACCCA TCGATATGCGGGAAA BAD_0875 1091550 - 1093583 + | CBS domain-containing protein TERM 1141 1093691 - 1093718 + G 76 -5.4 -4.65168 | overlap 1093693 GGTGTTGTACAGCTT GCGCTTGGGATG CAGC CAGCCCATGCCC TTTTTGCCGTATCCT TERM 1142 1093780 - 1093793 + G 80 -3.7 -5.09426 | overlap 1093770 CGCGACCTTTCGTAC GTGCC GACA GGCTC TTTTTTCAACTTGGC BAD_0876 1093677 - 1094204 + | hypothetical protein BAD_0877 1094918 - 1094412 - | hypothetical protein BAD_0878 1095212 - 1096675 + | putative transposase BAD_0879 1096668 - 1097450 + | insertion element hypothetical protein BAD_0880 1099199 - 1097541 - | hypothetical protein TERM 1143 1099432 - 1099414 - R 72 -2.4 -4.8622 | GTTGGGAACCAAAAA GGAAAC TGCCGAC GCTTCC AAGCTCATTCGATTC TERM 1144 1099514 - 1099470 - R 100 -13.8 -5.31877 | gap 1, opp_overlap 1099470 1099469 ATGCATGACAAAAAA CGTTGTGATGGCGATG-TCCA TTGC TGATTCATCACCATCACAACG ATTTCCCTTTATCAC BAD_0881 1100227 - 1099526 - | type III restriction enzyme TERM 1145 1099813 - 1099862 + g 100 -18.1 -3.4252 | opp_overlap 1099807 TCGCATACACCGCGA CCTCCGCGACGC-CGGCGAATTC TAGGCC GAATTCGCCGTGCGT-GCGCAGG TTATCGTGGATGACG TERM 1146 1100443 - 1100405 - R 88 -11.1 -4.07568 | gap 1, opp_overlap 1100407 1100408, overlap 1100406 CGCGTCTTCGGAAAA CGCGCAATGCTCTGCGGA GAAG TCCGAAGAGCATTGCT-G TTTGCCAACCGCTGC TERM 1147 1100443 - 1100406 - R 72 -11.3 -3.04398 | opp_overlap 1100407 1100408, overlap 1100405 GCGTCTTCGGAAAAC GCGCAATGCTCTGCGGA GAAG TCCGAAGAGCATTGCTG TTTGCCAACCGCTGC TERM 1148 1100407 - 1100443 + r 95 -14.6 -3.53444 | gap 1, opp_overlap 1100405 1100406, overlap 1100408 CGTCTTCGGAAAACG C-GCAATGCTCTGCGGA GAAG TCCGAAGAGCATTGCTG TTTGCCAACCGCTGC TERM 1149 1100408 - 1100441 + r 100 -18.3 -3.34517 | opp_overlap 1100405 1100406, overlap 1100407 GTCTTCGGAAAACGC GCAATGCTCTGCGGA GAAG TCCGAAGAGCATTGC TGTTTGCCAACCGCT BAD_0882 1102573 - 1100477 - | hypothetical protein TERM 1150 1100868 - 1100890 + g 75 -2.5 -4.90906 | overlap 1100852 1100857 GCAGCGGTGATGATG CCGTTGCTG TCGGC CTGCTGCGG TTTTTGCTGTTGTGC TERM 1151 1101578 - 1101593 + g 77 -3.2 -4.93877 | overlap 1101588 TTCCGCGGCGGGTTC CGGTTC CGAC GAAACG TTTTCTTTCGTGGAC TERM 1152 1102308 - 1102319 + g 78 -7.2 -4.59773 | overlap 1102299 1102297 GGCATGGCCCGTCTG CCGG ACGG CCGG TTTTTCAACGTCCAA BAD_0883 1105176 - 1102720 - | hypothetical protein TERM 1153 1103173 - 1103187 + g 80 -3.6 -5.15167 | overlap 1103165 1103179 TTCGCGTCCTTTTTC GTTTTT GAA AAAAGC TTTTTCTTCATCGTC TERM 1154 1103368 - 1103354 - G 75 -2.8 -4.87133 | ACTGTCGAAAGAAAA CTCG GGTTTTT CGAG TATGCCGTACTACTC TERM 1155 1105291 - 1105333 + r 76 -9 -3.96387 | opp_overlap 1105295 TTTGCCATTTGCCAG CCAACGCTGCAGGGTTGCGG ATT CCACTACAATGCAGCATTGG TTTCGTTCGATTGAT BAD_0884 1106492 - 1105506 - | putative integral membrane protein BAD_0885 1106708 - 1107151 + | hypothetical protein TERM 1156 1107213 - 1107163 - f 100 -18.3 -3.16742 | overlap 1107182 CTGAATCCGGAGGAA GCGGCCATCACCTGCGAAAGCGT CCGAC ACGCGGTATCAGGTGATGGCCGC ATATGGCATAATAGA TERM 1157 1107380 - 1107339 - f 100 -11.7 -4.72272 | gap 1 GTGGGGGAGCAAAAA GGACTATGTCTAGGGGGC TATTCCG ACCCCCTAGACAT-GACC GGTCCGAGTCCACCT TERM 1158 1107457 - 1107472 + F 74 -4.6 -4.76123 | overlap 1107458 CTACGACCGAAATCT TGCCGT GCGG ACGGCC TTTTCTTCGTAATTT BAD_0886 1107665 - 1108684 + | polyhydroxybutyrate depolymerase BAD_0887 1109326 - 1108790 - | p-aminobenzoate synthetase BAD_0888 1109739 - 1109362 - | hypothetical protein TERM 1159 1109521 - 1109508 - G 74 -3.7 -4.83169 | ACTGGTGCAGAAAAA GGCCG AGTC CGTCC ACGTCGAGACCGACA TERM 1160 1109601 - 1109573 - G 85 -13.1 -3.76411 | TCAAAACGACGCAAA GTCTGCCGTTCGC GTT GAGACCGGCAGAC GAGCCGCACTTCTTC BAD_0889 1109847 - 1110755 + | MFS permease BAD_0890 1110755 - 1112122 + | ABC transporter TERM 1161 1112864 - 1112852 - g 100 -5.5 -5.95166 | CCCAAGCAAAAAAAA TCGCC GGA AGCGA GTATGGCGTCACCGA BAD_0891 1112128 - 1113342 + | ABC transporter ATP-binding protein BAD_0892 1113355 - 1113990 + | ABC transporter ATP-binding protein TERM 1162 1114375 - 1114342 - g 70 -4.5 -4.43477 | gap 1, overlap 1114346 1114362 CCTATGGAACGAAAA CGAC-GGCGAACGG GAACTGA CCGTCCGCATGCCG GCAGCCGGAACGGAC BAD_0893 1114066 - 1114620 + | hypothetical protein BAD_0894 1115739 - 1115032 - | hypothetical protein TERM 1163 1115242 - 1115252 + g 75 -8.2 -4.25104 | overlap 1115227 GTCGGGGTCGTCGAA CGCC CAT GGCG TTTTGATGCCGAGCG BAD_0895 1116029 - 1115751 - | transcriptional regulator yoaP 1116253 - 1116759 + | hypothetical protein yoaP 1116539 - 1117000 + | hypothetical protein TERM 1164 1116988 - 1117013 + T 84 -6.1 -5.0538 | gap 1 CCTGAAGCTCGCAGG CGTACAGGTCTG ATG CCGGCCTG-ACG TTTTTTAAGATGCGG TERM 1165 1117176 - 1117152 - T 100 -13.6 -5.06089 | AAAGCATAAAGAAAA CGGGTTCCGA ATGAA CCGGAACCCG TATAACGTAAAACCT prsA2 1118254 - 1117235 - | ribose-phosphate pyrophosphokinase nadD 1119097 - 1118369 - | nicotinic acid mononucleotide adenylyltransferase TERM 1166 1119116 - 1119128 + r 70 -9.1 -3.63922 | overlap 1119114 TTTTGGTCCGGTCAT GCGGA CGC TCCGC TCTTTTGCGCGCCAT BAD_0900 1119705 - 1119112 - | hypothetical protein proA 1121012 - 1119729 - | gamma-glutamyl phosphate reductase TERM 1167 1120153 - 1120175 + g 70 -10.5 -3.53091 | overlap 1120151 1120174 TGCATTTCGACTCCC GCTGCGGCG AGCGC TGCCGCGGC TTTCGGCAGGAAGCT glyA 1122448 - 1121147 - | serine hydroxymethyltransferase TERM 1168 1121197 - 1121225 + g 83 -16.7 -2.66316 | overlap 1121194 AGTCTTCGGCAAGCT TGTCGACGCGCGC CTT GAGCGCGTCGACG TCCTGTCCTGCGGCG TERM 1169 1123090 - 1123108 + G 76 -10.2 -3.72576 | opp_overlap 1123085 CGTTCAAAGATGTGG CGCTGCAG ATT CTGCCGCG TTTCATGGCGCGCAC thrC 1122750 - 1124237 + | threonine synthase TERM 1170 1124304 - 1124276 - f 71 -7.2 -3.95183 | opp_overlap 1124277, overlap 1124277 CGATACATAGAAGAA TCGGCTGTCCGC GATAT GCGGGCGGCCGT TTTTCATTGACGCTG TERM 1171 1124277 - 1124303 + F 100 -15.8 -4.86621 | opp_overlap 1124277 1124276 GATACATAGAAGAAT CGGCTGTCCGCG ATA TGCGGGCGGCCG TTTTTCATTGACGCT BAD_0904 1124351 - 1125598 + | multidrug transport protein BAD_0905 1125629 - 1126168 + | GntR family transcriptional regulator BAD_0906 1126970 - 1126278 - | hydrolyase recN 1128724 - 1127018 - | DNA repair protein RecN ppnK 1129675 - 1128731 - | inorganic polyphosphate/ATP-NAD kinase TERM 1172 1130831 - 1130799 - g 74 -6.1 -4.4846 | opp_overlap 1130799, overlap 1130792 1130801 GAATGGAACAACAAA CTGCTGTTCGCCACC GAA GGTGTGGAACCGCGG TTGTGGCATGCGATG BAD_0909 1129914 - 1131377 + | hypothetical protein BAD_0910 1131461 - 1132114 + | hypothetical protein TERM 1173 1132129 - 1132180 + T 100 -17.4 -4.64766 | opp_overlap 1132134, overlap 1132134 GGCCCGCGGAACATG CAAAAGGCCGGCGGTCCATATGGG ATTT TTCATATGGGCTGCCGGCCTTTCA TTTTTACGCTATCGA TERM 1174 1132134 - 1132175 + T 100 -21.7 -4.32649 | opp_overlap 1132134, overlap 1132129 GCGGAACATGCAAAA GGCCGGCGGTCCATATGGG ATTT TTCATATGGGCTGCCGGCC TTTCATTTTTACGCT TERM 1175 1132175 - 1132134 - T 100 -15.9 -4.28254 | opp_overlap 1132129 1132134 GCGGAACATGCAAAA GGCCGGCGGTCCATATG GGATTTTT CATATGGGCTGCCGGCC TTTCATTTTTACGCT BAD_0911 1132966 - 1132211 - | hemolysin-like protein BAD_0912 1134016 - 1132991 - | hypothetical protein BAD_0913 1135770 - 1134031 - | hypothetical protein TERM 1176 1135742 - 1135758 + g 71 -9.3 -3.81 | overlap 1135744 TTGCCGTAGGACTTG CCGCGCG ATC CGCGCTG TTCTTCTGCCATGCT TERM 1177 1135744 - 1135756 + g 70 -10.5 -3.48824 | overlap 1135742 GCCGTAGGACTTGCC GCGCG ATC CGCGC TGTTCTTCTGCCATG tyrS 1137137 - 1135830 - | tyrosyl-tRNA synthetase BAD_0915 1139057 - 1137648 - | 2-ketoglutarate oxidoreductase subunit alpha TERM 1178 1139143 - 1139189 + r 95 -10.8 -4.57569 | opp_overlap 1139143 1139142 1139146, overlap 1139144 1139147 ATGTGATGCATAAAG GGATTTTGCCCGTCAGCGTGCG CAA CGCAGGTTGGCGGGGCAAATCG TTTTTGGACACATGC TERM 1179 1139144 - 1139188 + r 95 -14.3 -3.3422 | opp_overlap 1139143 1139142 1139146, overlap 1139143 1139147 TGTGATGCATAAAGG GATTTTGCCCGTCAGCGTGCG CAA CGCAGGTTGGCGGGGCAAATC GTTTTTGGACACATG TERM 1180 1139147 - 1139186 + r 95 -14.4 -3.23708 | gap 1, opp_overlap 1139146 1139143 1139142, overlap 1139144 1139143 GATGCATAAAGGGAT TTTG-CCCGTCAGCGTGCG CAA CGCAGGTTGGCGGGGCAAA TCGTTTTTGGACACA BAD_0916 1140020 - 1139232 - | hypothetical protein BAD_0917 1140529 - 1140020 - | hypothetical protein argH 1142092 - 1140557 - | argininosuccinate lyase TERM 1181 1141124 - 1141160 + g 71 -8.1 -4.02817 | gap 1, overlap 1141142 GTCGCCGATGAGTCG TCCGGAC-TTGCCG CGAGTGAGTT CGGCGATGTCCGGA TTCTTCTTCTGCGGC TERM 1182 1141565 - 1141579 + g 76 -5.6 -4.60487 | overlap 1141567 CGTACGTCCCGGCAT GACGGT GCG ACCGGC TTTTTCGGACTGCTC TERM 1183 1142127 - 1142071 - G 81 -15.4 -2.87211 | gap 2, opp_overlap 1142075, overlap 1142074 ATCTCCTTGCAGATA TGACTGAGGGAGAGCTTACCAGTCAGGA TGG TCCCGAC-GGTACGCTCTCCCCCATT-A TCAAGACGATTCACA TERM 1184 1142125 - 1142074 - G 88 -19.6 -2.69151 | gap 1, opp_overlap 1142075, overlap 1142071 TCCTTGCAGATATGA CTGAGGGAGAGCTTACCAGTCAGGA TGG TCCCGAC-GGTACGCTCTCCCCCAT TATCAAGACGATTCA TERM 1185 1142075 - 1142124 + g 95 -18.7 -3.29461 | gap 1, opp_overlap 1142074 1142071 CCTTGCAGATATGAC TGAGGGAGAGCTTACCAGTCAGGA TGG TCCCGAC-GGTACGCTCTCCCCCA TTATCAAGACGATTC argG 1143418 - 1142162 - | argininosuccinate synthase argR 1144014 - 1143496 - | arginine repressor argF 1144982 - 1144014 - | ornithine carbamoyltransferase argD 1146248 - 1145025 - | acetylornithine aminotransferase argB 1147266 - 1146310 - | acetylglutamate kinase argJ 1148449 - 1147277 - | bifunctional ornithine acetyltransferase/N-acetylglutamate synthase protein TERM 1186 1147420 - 1147430 + g 71 -8.2 -4.09864 | overlap 1147406 CGGAGCGGTCGCGTC CGGC TCC GCCG TTTTCGCAGATGCGT argC 1149582 - 1148446 - | N-acetyl-gamma-glutamyl-phosphate reductase BAD_0926 1150457 - 1149684 - | hypothetical protein TERM 1187 1150354 - 1150340 - G 71 -9.2 -3.8505 | opp_overlap 1150341, overlap 1150330 ACGAAGACGACGAAA CCGGAG CAG CCCCGG CCGCCTCCTGCCCTT pheT 1153057 - 1150454 - | phenylalanyl-tRNA synthetase beta chain TERM 1188 1150516 - 1150536 + g 72 -11.1 -3.27475 | overlap 1150505 1150514 GCTTGCGAACGGCTT CGCTGTCCT CGG AGGTCAGCG TCTTGTCCTCAGCGC TERM 1189 1152302 - 1152282 - G 74 -11.1 -3.53012 | CTCGCCGGGTCGAAA CCACGCACG GCG CGCGCGTAG TAGCGATCGCAGCCG pheS 1154138 - 1153071 - | phenylalanyl-tRNA synthetase subunit alpha BAD_0929 1155077 - 1154205 - | rRNA methylase TERM 1190 1155339 - 1155317 - gH 77 -7.6 -4.22948 | overlap 1155306 AAAACGCATGGAAAA GCGTCACCCG CAA CAAGGGACGC AATATGCTCATCATC BAD_0930 1155289 - 1156020 + | transporter TERM 1191 1156123 - 1156106 - gf 80 -9.1 -4.21933 | GCAATCGCAAAAGAA GCCGTCG AGAC CAACGGC GCACAATCGCAGCAG BAD_0931 1155977 - 1156807 + | ABC transporter TERM 1192 1156871 - 1156833 - f 100 -19 -4.64861 | opp_overlap 1156833 CTTCTCGAAAAGAAA TACGGCATGCGTCCCCAT GCA ACGGACACGCATGCCGTA TTTTTTCCTGTTTCG TERM 1193 1156833 - 1156871 + F 100 -14.6 -5.32699 | opp_overlap 1156833 CTTCTCGAAAAGAAA TACGGCATGCGTCCCCAT GCA ACGGACACGCATGCCGTA TTTTTTCCTGTTTCG TERM 1194 1158001 - 1158034 + G 86 -13.2 -3.53012 | gap 1 GTCTTGCCGGAGAGG CCGCCGGTTCGGCGA TCTCC TCGCTGA-TCGGCGG TTTCACCACCACCGC BAD_0932 1157091 - 1158485 + | hypothetical protein TERM 1195 1158663 - 1158681 + G 76 -10.3 -3.75153 | GGCGTTCGACACGCT GGCGAAG CATAT CTTCGCC TTTCAATTCGAGCAC BAD_0933 1158535 - 1159677 + | acyl protein synthase BAD_0934 1159674 - 1161188 + | acyl-CoA reductase BAD_0935 1161243 - 1162037 + | 3-oxoacyl-[acyl-carrier protein] reductase BAD_0936 1162058 - 1162639 + | hypothetical protein BAD_0937 1163582 - 1162653 - | hypothetical protein TERM 1196 1163301 - 1163277 - G 79 -8.5 -4.53303 | CACCGGCAGACAAAA CGCGCCGATAT TCA ATCCCGACGCG TTGAGCATTTGATAG TERM 1197 1163789 - 1163743 - H 100 -33.4 -3.48772 | opp_overlap 1163747 1163752 AACGCCGCGAGATAA CGTATGACTCCCACACGAACCG TGA CGGTTCGTATGGGAGTCATACG TTCAAAGCCACCGCA TERM 1198 1163747 - 1163785 + H 100 -24.8 -2.52464 | opp_overlap 1163743, overlap 1163752 CCGCGAGATAACGTA TGACTCCCACACGAACCG TGA CGGTTCGTATGGGAGTCA TACGTTCAAAGCCAC TERM 1199 1163926 - 1163871 - H 91 -14.1 -3.10715 | gap 3 GGCAGTAGGACTCAA GGGCGATGCGG--CCGACCACCGTGCCG CGG CGGCACGGTGGTCGGAACCGGAT-GACG TACGCTAGTTACTCT TERM 1200 1164266 - 1164225 - g 72 -13.2 -2.53263 | opp_overlap 1164228 1164240 CCGACCTCCAACGCA CTTCGTTGGAAAACCGCC GTTTTT GGCTATTTTCCAACGAAA TCGGCTCGTTTCGAG TERM 1201 1164228 - 1164243 + G 72 -2.4 -4.80396 | opp_overlap 1164225, overlap 1164240 ACCTCCAACGCACTT CGTTGG AAAA CCGCCG TTTTTGGCTATTTTC BAD_0938 1163876 - 1164286 + | integral membrane protein BAD_0939 1164382 - 1165689 + | phage integrase TERM 1202 1165730 - 1165699 - T 86 -10.8 -4.09685 | opp_overlap 1165699 GGCTAGGCGCGAAAA GACCCGCGGCCT ATTCGGCA AGGCCGTGGGCC ATGGGCGCGGAATGG BAD_0940 1166633 - 1166115 - | hypothetical protein TERM 1203 1166323 - 1166339 + g 73 -4.3 -4.66537 | AGCTCCTTCATCGAG GGGATGA GGC TCGACCC TTTTATCTTGCCGAC TERM 1204 1166589 - 1166550 - G 80 -3.4 -5.07567 | gap 1, overlap 1166560 1166562 1166573 GCATACCGCAAAAAA CACGCGAGAACACATCGCC AAA GGCGACGC-CCCACGCCCG AGGCCACATGGCATC BAD_0942 1167940 - 1167296 - | putative ATP/GTP-binding protein BAD_0941 1166806 - 1167525 + | putative endonuclease/exonuclease/phosphatase family protein TERM 1205 1168201 - 1168246 + Tr 100 -29.9 -4.08767 | opp_overlap 1168185 1168203 1168205 GGGCCCGACGGATAC GACACGGCCCCCGCATGGCTC CTTC GAGTCGTGCGGGGGTCGTGTC TTTTCCGGACGTAAG TERM 1206 1168244 - 1168203 - TR 100 -20.1 -2.64616 | opp_overlap 1168201, overlap 1168185 1168205 GCCCGACGGATACGA CACGGCCCCCGCATGGCTC CTTC GAGTCGTGCGGGGGTCGTG TCTTTTCCGGACGTA TERM 1207 1168242 - 1168205 - TR 93 -16.9 -2.8655 | opp_overlap 1168201, overlap 1168185 1168203 CCGACGGATACGACA CGGCCCCCGCATGGCTC CTTC GAGTCGTGCGGGGGTCG TGTCTTTTCCGGACG glnA1 1169773 - 1168337 - | glutamine synthetase 1 TERM 1208 1170005 - 1169976 - R 100 -17.3 -4.77438 | opp_overlap 1169976, overlap 1169998 AGGCAGCATGAAAAA GGTCCCGATCGTA TGAA TACGATCGGAACC TTCCGTGACATCATG TERM 1209 1169976 - 1170005 + r 91 -15.1 -3.07113 | opp_overlap 1169976 1169998 AGGCAGCATGAAAAA GGTCCCGATCGTA TGAA TACGATCGGAACC TTCCGTGACATCATG BAD_0944 1170824 - 1170036 - | hypothetical protein TERM 1210 1170553 - 1170576 + g 78 -13.2 -3.15861 | gap 1 CGACCTTCGATCTTG GCGTAGCCGAC CTT GTCGGC-ACGC TTGGTGAGCATCATG pdhD 1172443 - 1170920 - | dihydrolipoamide dehydrogenase TERM 1211 1172519 - 1172497 - R 90 -10.6 -4.2803 | CATGGTAATGGAAAA GCCGTCAG TTGTTCG CTGACGGC TTGAAAAATCACCGG BAD_0946 1173276 - 1172551 - | hypothetical protein TERM 1212 1173605 - 1173584 - g 84 -9.4 -4.57073 | opp_overlap 1173597 CATCGGTTCCAAAAA CGTCAGCG AGGATG CGCCGACG GTGCTGCTGTACGCG BAD_0947 1173336 - 1174703 + | hypothetical protein TERM 1213 1174785 - 1174731 - T 100 -25.5 -2.60496 | gap 1, opp_overlap 1174731 1174737, overlap 1174737 GGCTTGCCGAAATAG GATAAAGCTCTCTGTCATACGATTCC GATT GGAA-CGTATGACAGAGAGCTTTTTC ATTTAGCTGCCGATT TERM 1214 1174731 - 1174785 + T 100 -25.5 -2.79175 | gap 1, opp_overlap 1174731 1174737, overlap 1174737 GGCTTGCCGAAATAG GATAAAGCTCTCTGTCATACGATTCC GATT GGAA-CGTATGACAGAGAGCTTTTTC ATTTAGCTGCCGATT TERM 1215 1174779 - 1174737 - T 100 -23.1 -4.1043 | gap 1, opp_overlap 1174731 1174737, overlap 1174731 CCGAAATAGGATAAA GCTCTCTGTCATACGATTCC GATT GGAA-CGTATGACAGAGAGC TTTTTCATTTAGCTG TERM 1216 1174737 - 1174779 + T 100 -23.1 -5.00138 | gap 1, opp_overlap 1174737 1174731, overlap 1174731 CCGAAATAGGATAAA GCTCTCTGTCATACGATTCC GATT GGAA-CGTATGACAGAGAGC TTTTTCATTTAGCTG BAD_0948 1175695 - 1174817 - | cobalt ABC transporter permease TERM 1217 1174960 - 1174984 + g 72 -12.2 -3.06183 | gap 1, overlap 1174980 GCGCTTGGCTTCGTG GCGCGTCGGAT CCGA ATCCG-CGCGC TTCCATGGCGGTGGC BAD_0949 1177190 - 1175697 - | ATP binding protein of ABC transporter TERM 1218 1177260 - 1177297 + r 81 -12.8 -3.05596 | opp_overlap 1177260 1177265, overlap 1177265 GATGCGCCATCACAA GAAAATCCCGCACCAC CTTGAT GTGATGCGGGATTTGC TTGCATCGGACAATC TERM 1219 1177297 - 1177260 - R 95 -15 -3.4072 | opp_overlap 1177260 1177265, overlap 1177265 GATGCGCCATCACAA GAAAATCCCGCACCAC CTTGAT GTGATGCGGGATTTGC TTGCATCGGACAATC TERM 1220 1177292 - 1177265 - R 100 -13.5 -4.81212 | opp_overlap 1177265 1177260, overlap 1177260 GCCATCACAAGAAAA TCCCGCACCAC CTTGAT GTGATGCGGGA TTTGCTTGCATCGGA TERM 1221 1177265 - 1177292 + r 85 -11.3 -3.93288 | opp_overlap 1177260 1177265, overlap 1177260 GCCATCACAAGAAAA TCCCGCACCAC CTTGAT GTGATGCGGGA TTTGCTTGCATCGGA BAD_0950 1177925 - 1177311 - | hypothetical protein mrp 1179299 - 1178178 - | hypothetical protein ligA 1182043 - 1179365 - | LigA BAD_0953 1185442 - 1182122 - | hypothetical protein TERM 1222 1182653 - 1182685 + g 71 -9.2 -3.75153 | gap 2, opp_overlap 1182649 GGCGTAACGCACCAT GGCGTTCAGATGCGGC AGC GCGGCATC-GA-CGCC TTTGACTTGGGCGAG TERM 1223 1186361 - 1186389 + G 70 -13.1 -2.85351 | TGGATTTGGATGTGC CGGATGCGTTGCG TGA CGCGGCGGATCCG TATGATGTGGCCACC BAD_0954 1185586 - 1187724 + | hypothetical protein TERM 1224 1187771 - 1187755 - f 81 -3.7 -5.17353 | opp_overlap 1187755 ACATCCAGTAAAAAA TCAGG TTTCTTT CCTGA TTCATATAGCAGTTT BAD_0955 1188122 - 1188961 + | ATP binding protein of ABC transporter BAD_0956 1190190 - 1188988 - | aminotransferase TERM 1225 1189989 - 1189954 - G 86 -14.6 -3.35813 | overlap 1189928 CTGCATGTCAAGGAA CGCGGCCAGCGCCTCA CGCG CGTAGCGTTGGCCGCG CGGGTCGGCGGAGTA TERM 1226 1190216 - 1190239 + r 100 -18.2 -3.2963 | opp_overlap 1190216 TGGAACAACGAAAAA GGCCGTCCGA CGAA TCGGACGGCC TTGTGACAACCTAAT TERM 1227 1190239 - 1190216 - R 100 -18.2 -4.99435 | opp_overlap 1190216 TGGAACAACGAAAAA GGCCGTCCGA CGAA TCGGACGGCC TTGTGACAACCTAAT ppgK 1191033 - 1190266 - | polyphosphate glucokinase TERM 1228 1191241 - 1191198 - R 100 -29.2 -3.53012 | gap 1 CGCCTGTTTTGCAAA CGATTCGTCCCACGTCGGTAG AGG CT-CCGACGTGGGACGAATCG TCAATCGCGTGATCG BAD_0958 1192301 - 1191288 - | glycosyltransferase BAD_0959 1193146 - 1192325 - | hypothetical protein TERM 1229 1193167 - 1193156 - R 78 -5.8 -4.7173 | GAGCATATCGAAAAA CTCG CCGC CGAG GTGAGCGAGGAACGT TERM 1230 1193339 - 1193376 + r 100 -26.4 -3.27994 | opp_overlap 1193339 TTATTTCCATATGAA GCGGCCCGCCTTCCGA TTGGTT TCGGAGGGCGGGCCGC TTCATATAACGTTCG TERM 1231 1193376 - 1193339 - R 100 -24.2 -3.26471 | opp_overlap 1193339 TTATTTCCATATGAA GCGGCCCGCCTTCCGA TTGGTT TCGGAGGGCGGGCCGC TTCATATAACGTTCG BAD_0960 1193765 - 1193397 - | hypothetical protein TERM 1232 1193655 - 1193685 + g 72 -3 -4.7497 | overlap 1193658 1193661 GAGCGGATTGAGTTT GGTGGCCAGGCCGC GCA GCTGCTTGACCTGC TTTTTGGTAAGTGCC cbiO 1196111 - 1193784 - | cobalt import ATP-binding/permease protein cbiO TERM 1233 1195073 - 1195095 + g 89 -9.8 -4.66833 | GCATGACGTAGCCGA CCGTACGGCG CAG CCTCGTACGG TTTTTGCGATTGAGG BAD_0962 1196787 - 1196224 - | hypothetical protein TERM 1234 1196431 - 1196458 + g 75 -2.7 -4.87665 | gap 2, opp_overlap 1196414, overlap 1196434 1196436 1196437 GCCGACGATGATGCC GATC-AG-CGCGC CCTT GCGCGTCTTGTTC TTTTTGTAGATGAGC TERM 1235 1196436 - 1196452 + g 71 -5.8 -4.36508 | gap 1, opp_overlap 1196414, overlap 1196434 1196431 1196437 CGATGATGCCGATCA G-CGCGC CCTT GCGCGTC TTGTTCTTTTTGTAG TERM 1236 1196437 - 1196450 + g 71 -9.5 -3.7581 | opp_overlap 1196414, overlap 1196436 1196434 1196431 GATGATGCCGATCAG CGCGC CCTT GCGCG TCTTGTTCTTTTTGT BAD_0963 1200947 - 1197108 - | helicase TERM 1237 1197148 - 1197175 + g 76 -14.8 -2.52464 | overlap 1197138 TCCTTGCTGAGCGTG CCGACGCCGCCG GATG CGGTGCCGTCGG TGAATTGGCGCGCCA TERM 1238 1199007 - 1199036 + g 86 -12.9 -3.91716 | CTGCACGCCGTCGGT GAGCATGAGCAGG ATAG CCTGCTCGTCCTC TTCTTTGACGCGTGC TERM 1239 1200976 - 1201006 + r 80 -12.4 -3.31248 | opp_overlap 1200979, overlap 1200978 1200979 CGCGATGGAACAGCA AAAGCCGCGGCCCG ATC CGGACCGCGGCATG TTATCGCCCGTGTTG TERM 1240 1200978 - 1201004 + r 95 -15 -3.22102 | opp_overlap 1200979, overlap 1200976 1200979 CGATGGAACAGCAAA AGCCGCGGCCCG ATC CGGACCGCGGCA TGTTATCGCCCGTGT TERM 1241 1200979 - 1201003 + r 100 -18.5 -2.5294 | opp_overlap 1200979, overlap 1200978 1200976 GATGGAACAGCAAAA GCCGCGGCCCG ATC CGGACCGCGGC ATGTTATCGCCCGTG TERM 1242 1201003 - 1200979 - R 100 -20.7 -4.43681 | opp_overlap 1200978 1200976 1200979 GATGGAACAGCAAAA GCCGCGGCCCG ATC CGGACCGCGGC ATGTTATCGCCCGTG pepC1 1202439 - 1201024 - | aminopeptidase C TERM 1243 1201440 - 1201453 + g 74 -5.9 -4.57569 | GTCCGGCGCTAATCT GGTCG ACCG CGGCC TTTTTGAACACGTCG TERM 1244 1203492 - 1203464 - g 70 -10.2 -3.44051 | gap 1, opp_overlap 1203486 TGTCTACTACCAGAA CTGCACC-GCGGC ACGA GCCGCTGGCGCCG CGCCTATCTACCAGG BAD_0965 1202601 - 1203566 + | hypothetical protein TERM 1245 1203611 - 1203667 + T 100 -33.4 -2.63783 | opp_overlap 1203628, overlap 1203611 1203612 1203628 TGTAAGACGTATGAC GGTGAGGCATAGGAAAAGCGCCGGGT TATTC ATCCGGCGCTTTTCCTATGCCTCAGC CTCTTTCCGCATTTT TERM 1246 1203611 - 1203668 + T 100 -33.2 -3.40843 | gap 1, opp_overlap 1203628, overlap 1203611 1203612 1203628 TGTAAGACGTATGAC GG-TGAGGCATAGGAAAAGCGCCGGGT TATTC ATCCGGCGCTTTTCCTATGCCTCAGCC TCTTTCCGCATTTTC TERM 1247 1203612 - 1203670 + T 86 -12.9 -3.66666 | gap 4, opp_overlap 1203628, overlap 1203611 1203611 1203628 GTAAGACGTATGACG G----TGAGGCATAGGAAAAGCGCCGGGT TATTC ATCCGGCGCTTTTCCTATGCCTCAGCCTC TTTCCGCATTTTCCG TERM 1248 1203628 - 1203650 + T 100 -12.7 -4.3586 | opp_overlap 1203628, overlap 1203611 1203611 1203612 TGAGGCATAGGAAAA GCGCCGGGT TATTC ATCCGGCGC TTTTCCTATGCCTCA TERM 1249 1203650 - 1203628 - T 90 -10.5 -4.3586 | opp_overlap 1203611 1203611 1203612 1203628 TGAGGCATAGGAAAA GCGCCGGGT TATTC ATCCGGCGC TTTTCCTATGCCTCA BAD_0966 1204392 - 1203706 - | voltage-gated potassium channel protein TERM 1250 1204466 - 1204477 + r 91 -7.2 -4.87273 | opp_overlap 1204466 ATGGCTGCCATCATA CGGG TTTG CCCG TTTTTGTGACGTATT BAD_0967 1205619 - 1204627 - | hypothetical protein BAD_0968 1206139 - 1205660 - | D-tyrosyl-tRNA deacylase BAD_0969 1206828 - 1206157 - | hypothetical protein BAD_0970 1208029 - 1206986 - | LacI-type transcriptional regulator TERM 1251 1207363 - 1207397 + g 78 -7.1 -4.63486 | CATCATGCTCGTCCG CGGTTATGACGTAGG CATAC TCATCGTCGTAACCG TTTTGTTCAGCCGCT TERM 1252 1208592 - 1208581 - g 71 -7.2 -4.2717 | ACCATCTCACCAAAA CCGC ACAT GCGG CAGGCATCAAAATAG TERM 1253 1209601 - 1209578 - g 89 -11.6 -4.2535 | opp_overlap 1209576 AGACCAGATCGAAAA GGGCCGCGAC GGCT GCCGCGTCCC GCTGCCTTGGAAGGC aglA 1208286 - 1210061 + | alpha-1,4-glucosidase BAD_0972 1210115 - 1211482 + | ABC transporter solute-binding protein TERM 1254 1211505 - 1211551 + F 100 -22.5 -5.08824 | opp_overlap 1211505 CGACTCGTGGAAAAA CGGCTGGACGCCGGTAGAT AACACCCCA ATCTACCGCCGTCCAGCCG TTTTTTCCATGCGAC TERM 1255 1211551 - 1211505 - f 100 -22.5 -4.57569 | opp_overlap 1211505 CGACTCGTGGAAAAA CGGCTGGACGCCGGTAGAT AACACCCCA ATCTACCGCCGTCCAGCCG TTTTTTCCATGCGAC TERM 1256 1211900 - 1211871 - g 73 -13.5 -2.78596 | opp_overlap 1211870 1211868 1211869 CAGCCGCTCACCATA CTGCGGCGTCCCG CGGT CGGCAGGCCGCAG CTAGTATCTCATGAT BAD_0973 1211592 - 1212065 + | D-tyrosyl-tRNA(Tyr) deacylase TERM 1257 1212503 - 1212472 - T 73 -10.2 -3.37975 | opp_overlap 1212472, overlap 1212459 1212458 ACCCATGACGGAGAA TCCTTCACCAGCAC GGAT GCGTTGATGAAGGA TCTGCTGGATGCTTA TERM 1258 1212749 - 1212739 - T 70 -6.8 -4.08216 | TTATCGCGTGGAAAA GCAG GAA CTGC AACTCGTGCTCACAC BAD_0974 1215251 - 1213113 - | hypothetical protein BAD_0975 1215815 - 1216003 + | glycosyl transferase BAD_0976 1216035 - 1216970 + | phage AbiD protein BAD_0977 1217415 - 1217062 - | nucleotidyltransferase family protein BAD_0978 1217732 - 1217412 - | hypothetical protein BAD_0979 1217806 - 1218042 + | hypothetical protein TERM 1259 1218129 - 1218089 - f 83 -9.8 -4.19506 | gap 1, overlap 1218090 1218098 AGCCGAACGCCAAAA CCCGAAGCATGAGCGTTGG AATT CCAACGCTCATACT-CGCC ATAATCGCCAAACGG TERM 1260 1218128 - 1218090 - f 84 -13.3 -3.11222 | gap 1, overlap 1218089 1218098 GCCGAACGCCAAAAC CCGAAGCATGAGCGTTGG AATT CCAACGCTCATACT-CGC CATAATCGCCAAACG TERM 1261 1218121 - 1218098 - f 83 -15.4 -2.78738 | overlap 1218090 1218089 CCAAAACCCGAAGCA TGAGCGTTGG AATT CCAACGCTCA TACTCGCCATAATCG BAD_0980 1218350 - 1219003 + | hypothetical protein BAD_0981 1219629 - 1219021 - | hypothetical protein murG 1219915 - 1219658 - | hypothetical protein BAD_0983 1220747 - 1219974 - | hypothetical protein BAD_0984 1220906 - 1221658 + | hypothetical protein dnaQ1 1222313 - 1221690 - | putative DNA polymerase III epsilon subunit mmuM 1222615 - 1222370 - | homocysteine methyltransferase hutM 1223435 - 1222731 - | histidine permease TERM 1262 1223908 - 1223868 - R 100 -14.9 -4.9792 | opp_overlap 1223872 1223875, overlap 1223872 TATTTGAGAGAAAAA CGAAGAAGGCTGGAATCAT CAA AGGATTCCAGCCTTCTTTA CGCGTTTGTCAGCGC TERM 1263 1223904 - 1223872 - R 100 -17.9 -3.91281 | opp_overlap 1223872 1223875, overlap 1223868 TGAGAGAAAAACGAA GAAGGCTGGAATCAT CAA AGGATTCCAGCCTTC TTTACGCGTTTGTCA TERM 1264 1223872 - 1223904 + r 100 -17.9 -3.65426 | opp_overlap 1223868 1223872, overlap 1223875 TGAGAGAAAAACGAA GAAGGCTGGAATCAT CAA AGGATTCCAGCCTTC TTTACGCGTTTGTCA TERM 1265 1223875 - 1223901 + r 100 -13.8 -3.95071 | opp_overlap 1223872 1223868, overlap 1223872 GAGAAAAACGAAGAA GGCTGGAATCAT CAA AGGATTCCAGCC TTCTTTACGCGTTTG tig 1225317 - 1223947 - | trigger factor TERM 1266 1224650 - 1224677 + g 76 -9.8 -3.72576 | TCGCCTTCGTGCTTG CCGGCCTCGAGG GTGC CTTCGAAGCTGG TTTCCTCACCGGCGG BAD_0989 1226665 - 1225370 - | hypothetical protein BAD_0990 1227290 - 1226658 - | hypothetical protein TERM 1267 1227183 - 1227149 - G 82 -12.8 -3.6502 | TACGGTCCACGGAAA GCACCGCGTTCCAGAC TTG GTCGGGAACGCCCTGC GGTCGCATAAGCATG TERM 1268 1227421 - 1227383 - R 100 -16.1 -4.25056 | opp_overlap 1227384 CAGCGTATGAATAAA TTGGTCCATGCCATCGA TTCAG TCGGTGGCATGGACCGA TATGAGGCGTTCCGC pflA 1228356 - 1227478 - | pyruvate formate-lyase 1 activating enzyme TERM 1269 1227669 - 1227679 + g 70 -3.2 -4.63486 | overlap 1227639 CGCAGATCTTCGCCA CGTT CTC GACG TTTTCTTCGGAGGAT TERM 1270 1228446 - 1228411 - R 100 -17 -4.18058 | gap 1, opp_overlap 1228404 1228403 AACGATATGGGAAAA GCGAAAGGGACGAAGCC ACG AGCTCCGTCCCTT-CGC ATTACCGTCGTTTCA pfl 1230869 - 1228494 - | formate acetyltransferase BAD_0993 1231311 - 1231018 - | hypothetical protein nadE 1232254 - 1231271 - | glutamine-dependent NAD(+) synthetase BAD_0995 1234202 - 1233054 - | hypothetical protein BAD_0996 1234313 - 1235134 + | HAD-type hydrolase BAD_0997 1235270 - 1236178 + | TonB-dependent receptor TERM 1271 1236205 - 1236230 + F 93 -12.7 -4.02817 | gap 1 GCAGTAGGAGTTCAA TGCCGCAGG-TA TAC TACCCTGCGGCA TTCTTGTTATGGAAC TERM 1272 1236318 - 1236297 - g 77 -7.9 -4.3898 | ACCATCTGCACAAAA GCTACGGCA GTGG CGCCGAAGC GCATGAGGTGCTGCA BAD_0998 1236266 - 1237090 + | D-methionine ABC transporter TERM 1273 1237263 - 1237244 - g 70 -4.2 -4.57073 | overlap 1237246 CACGTCCGCGAAAAA GGGCATCC GTCC GAATGCAC CGCTCAACACCGTGC BAD_0999 1237092 - 1237772 + | ABC-type metal ion transport system, permease component TERM 1274 1237831 - 1237801 - T 100 -17 -4.25104 | opp_overlap 1237801 CGTTCCTTATGAAAA GCGGGTCCAAAC GTTTGTT GTTTGGACCCGC TTTTCGTACGCGGAA TERM 1275 1237801 - 1237831 + T 100 -17.7 -4.25104 | opp_overlap 1237801 CGTTCCTTATGAAAA GCGGGTCCAAACG TTTGT TGTTTGGACCCGC TTTTCGTACGCGGAA BAD_1000 1238317 - 1237868 - | hypothetical protein BAD_1001 1238441 - 1238980 + | peptidyl-prolyl cis-trans isomerase TERM 1276 1239006 - 1239038 + T 100 -12.2 -4.99043 | gap 1, opp_overlap 1239008 1239009 1239013, overlap 1239009 1239013 CACAGCCGTACAATA T-AGGAAAGCCCCTC GATT GAGGGGCTTTCTTCA TTTTATTTATAGAGG TERM 1277 1239035 - 1239008 - T 95 -14.2 -3.17622 | opp_overlap 1239006 1239009 1239013, overlap 1239009 1239013 CAGCCGTACAATATA GGAAAGCCCCTC GATT GAGGGGCTTTCT TCATTTTATTTATAG TERM 1278 1239034 - 1239009 - T 95 -17.7 -2.50252 | opp_overlap 1239006 1239009 1239013, overlap 1239008 1239013 AGCCGTACAATATAG GAAAGCCCCTC GATT GAGGGGCTTTC TTCATTTTATTTATA TERM 1279 1239009 - 1239034 + T 100 -17.7 -3.90741 | opp_overlap 1239009 1239008 1239013, overlap 1239006 1239013 AGCCGTACAATATAG GAAAGCCCCTC GATT GAGGGGCTTTC TTCATTTTATTTATA TERM 1280 1239013 - 1239030 + T 100 -12.7 -4.49531 | opp_overlap 1239013 1239009 1239008, overlap 1239009 1239006 GTACAATATAGGAAA GCCCCTC GATT GAGGGGC TTTCTTCATTTTATT TERM 1281 1239030 - 1239013 - T 93 -12.7 -3.95449 | opp_overlap 1239009 1239006 1239013, overlap 1239009 1239008 GTACAATATAGGAAA GCCCCTC GATT GAGGGGC TTTCTTCATTTTATT relA 1241405 - 1239093 - | GTP pyrophosphokinase TERM 1282 1241465 - 1241512 + r 100 -16.4 -3.70043 | gap 1, opp_overlap 1241466 1241469, overlap 1241466 1241467 CCCGCGCATCACCAT ATGACGGATGTATCCGGCCGCGT GTT GCACGGCCGGATACATCC-TCGG TCTTTGTGTATTGCA TERM 1283 1241466 - 1241511 + r 100 -19.9 -2.81303 | gap 1, opp_overlap 1241466 1241469, overlap 1241465 1241467 CCGCGCATCACCATA TGACGGATGTATCCGGCCGCGT GTT GCACGGCCGGATACATCC-TCG GTCTTTGTGTATTGC TERM 1284 1241511 - 1241466 - R 100 -19.2 -2.82516 | gap 1, opp_overlap 1241465 1241466 1241467, overlap 1241469 CCGCGCATCACCATA TGACGGATGTATCCGGCCGCG TGTTG CACGGCCGGATACATCC-TCG GTCTTTGTGTATTGC TERM 1285 1241467 - 1241514 + r 88 -11.5 -4.21142 | gap 3, opp_overlap 1241466 1241469, overlap 1241466 1241465 CGCGCATCACCATAT GA-CG-G-ATGTATCCGGCCGCGT GTT GCACGGCCGGATACATCCTCGGTC TTTGTGTATTGCAGT TERM 1286 1241509 - 1241469 - R 100 -22 -2.67515 | opp_overlap 1241466 1241465 1241467, overlap 1241466 CGCATCACCATATGA CGGATGTATCCGGCCGCG TGTTG CACGGCCGGATACATCCT CGGTCTTTGTGTATT dut 1242091 - 1241534 - | deoxyuridine 5'-triphosphate nucleotidohydrolase BAD_1004 1242321 - 1242010 - | hypothetical protein BAD_1005 1242452 - 1243447 + | hypothetical protein BAD_1006 1244738 - 1243503 - | hypothetical protein TERM 1287 1245796 - 1245776 - g 95 -11.1 -4.56914 | TCATCGAAATCAAAA CCGGGTTCG ATC CGAACGCGG TGCTGGCGCAGCTGT gyrA2 1244815 - 1247490 + | DNA topoisomerase IV subunit A TERM 1288 1247506 - 1247551 + T 74 -7.5 -4.11484 | overlap 1247507 TTCGACGAAATCGAT TGGCGGGGCTCTGGACTGG TTCTTCTT CCGGTTCAGGGCCTTCCCG TTTTGCGCACTTGGG lhr 1252491 - 1247614 - | ATP-dependent helicase II TERM 1289 1248403 - 1248381 - G 73 -9.8 -3.64703 | opp_overlap 1248350 1248371, overlap 1248382 GCGCGCGCACTGAAA CCGTGCCTTG AGT CAAGGCCCGA ACGGGAGCGAATGAA TERM 1290 1250730 - 1250750 + g 85 -12.5 -3.72576 | opp_overlap 1250729 CTGGTTTCAGATCAT CCATCGCCG CGG CGGCGACGG TTTGCTGGGCAAGCA BAD_1009 1253817 - 1252585 - | hypothetical protein TERM 1291 1253893 - 1253904 + r 71 -4.4 -4.67943 | TTATCCAAAGTTACC TACC AAAC GGTA TTTTGTATCTTGCAC TERM 1292 1253988 - 1253960 - R 88 -9.6 -4.39166 | gap 1 GTGCATACACGAAAA GCGGGTCTC-CGC CGTA ACGCAAGACCCGC CAATCGCAATCGCCA gyrB2 1256335 - 1254011 - | DNA gyrase subunit B TERM 1293 1256410 - 1256364 - R 78 -11.8 -3.21276 | gap 1, opp_overlap 1256366 1256380, overlap 1256366 1256370 TGTCGCCTTACAAGA CATGAAGTCGAGAAACCCTGC GTTCAT GCC-GGTTTCTCGACTTCATT TACTCGCGTCTGATT TERM 1294 1256366 - 1256408 + r 95 -15.1 -3.75665 | gap 1, opp_overlap 1256364 1256366 1256370, overlap 1256380 TCGCCTTACAAGACA TGAAGTCGAGAAACCCTGCG TTCA TGCCG-GTTTCTCGACTTCA TTTACTCGCGTCTGA TERM 1295 1256408 - 1256366 - R 95 -14.4 -3.17146 | gap 1, opp_overlap 1256366 1256380, overlap 1256364 1256370 TCGCCTTACAAGACA TGAAGTCGAGAAACCCTGC GTTCAT GCC-GGTTTCTCGACTTCA TTTACTCGCGTCTGA hrdB 1257869 - 1256430 - | RNA polymerase sigma factor TERM 1296 1257742 - 1257759 + g 77 -3.3 -5.0133 | CTCTTCTTGGCAGCA GGCTTGC GCGT GGAGGCC TTTTTTCCGGAGGTG BAD_1012 1258635 - 1257991 - | hypothetical protein idsA 1258845 - 1259933 + | bifunctional short chain isoprenyl diphosphate synthase pknA2 1260029 - 1262227 + | serine-threonine protein kinase pknA2 TERM 1297 1262247 - 1262301 + T 100 -24.6 -3.60296 | opp_overlap 1262251, overlap 1262251 CCTGATTACAAAATA GAAATCAGGGGTGTCTGTTCCGAAAA CAT TCTTCGGAACAGACACCCCTGATTGG TTTGGAATGAACCTC TERM 1298 1262251 - 1262297 + T 100 -29.8 -3.53031 | opp_overlap 1262251, overlap 1262247 ATTACAAAATAGAAA TCAGGGGTGTCTGTTCCGAAAA CAT TCTTCGGAACAGACACCCCTGA TTGGTTTGGAATGAA TERM 1299 1262297 - 1262251 - T 100 -32 -4.52142 | opp_overlap 1262251 1262247 ATTACAAAATAGAAA TCAGGGGTGTCTGTTCCGAAAA CAT TCTTCGGAACAGACACCCCTGA TTGGTTTGGAATGAA BAD_1015 1263054 - 1262326 - | hypothetical protein BAD_1016 1263105 - 1263671 + | hypothetical protein TERM 1300 1263779 - 1263823 + T 89 -16.4 -2.69799 | overlap 1263775 GATACAGGGTCAGAC CGCGAGGGACATGCTCCGGA ACTCC TCCGGGGTGCGTCCCTCGAG TCGTATCTGGCGTCG BAD_1017 1264483 - 1263773 - | transposase t150 1265130 - 1264366 - | IS150 putative transposase TERM 1301 1265193 - 1265140 - R 100 -15.6 -4.05208 | gap 2, opp_overlap 1265140 ACGCATACGAAAGAA CCGCACCTCCGATCATCGAATCTGAA TTTC TTCAG-TCCAACAATCGG-GGTGCGG TTCATATTTACGCCG trpD 1266374 - 1265241 - | anthranilate phosphoribosyltransferase TERM 1302 1266309 - 1266324 + g 76 -5.4 -4.60292 | gap 1 CATGATGCCCTCCTT GGCGCTG TCG CA-CGCC TTTATTGTTGTTCTG TERM 1303 1266429 - 1266454 + r 100 -16.9 -3.54475 | opp_overlap 1266429 CTTCAAAAAAGAAAA CCTCCCCCGAT TACG GTCGGGGGAGG TTATGTCATGAGCAA TERM 1304 1266454 - 1266429 - R 100 -16.2 -5.42198 | opp_overlap 1266429 CTTCAAAAAAGAAAA CCTCCCCCGA TTACGG TCGGGGGAGG TTATGTCATGAGCAA secA1 1269363 - 1266487 - | preprotein translocase subunit SecA TERM 1305 1269384 - 1269411 + r 80 -10.6 -3.91072 | overlap 1269408 CTCCCTTTGTGTATG GTGACTTTCCTC GATT GAGGATAGTCGC TTTCTCGCGATTTCC TERM 1306 1269475 - 1269524 + r 83 -10.1 -4.11484 | gap 1, opp_overlap 1269480 1269485, overlap 1269485 GTATCTTGTTTTTCG CATAA-GAAAAGAGGCCCGCATGT ATG ACATGCGAGCCTCTTATCGTTCAG TTTTCAGCCATTAGC TERM 1307 1269518 - 1269480 - R 100 -21.2 -3.28712 | opp_overlap 1269475 1269485, overlap 1269485 TTGTTTTTCGCATAA GAAAAGAGGCCCGCATGT ATG ACATGCGAGCCTCTTATC GTTCAGTTTTCAGCC TERM 1308 1269513 - 1269485 - R 100 -19.7 -4.77165 | opp_overlap 1269485 1269475, overlap 1269480 TTTCGCATAAGAAAA GAGGCCCGCATGT ATG ACATGCGAGCCTC TTATCGTTCAGTTTT TERM 1309 1269485 - 1269513 + r 100 -17.5 -3.55783 | opp_overlap 1269480 1269485, overlap 1269475 TTTCGCATAAGAAAA GAGGCCCGCATGT ATG ACATGCGAGCCTC TTATCGTTCAGTTTT BAD_1021 1270204 - 1269542 - | hypothetical protein BAD_1022 1270750 - 1270367 - | hypothetical protein BAD_1023 1271521 - 1270826 - | RecX-like protein TERM 1310 1271314 - 1271346 + g 71 -5.3 -4.29432 | opp_overlap 1271305 1271304, overlap 1271310 1271341 TAGAATCGCCGTTCC CGACACGCCCAGCGT GTC GCGCGTGTCGTGGCG TTTTCGTCGCATTTG TERM 1311 1271459 - 1271449 - G 75 -8.2 -4.1552 | GATCCTCTGAAGAAA GGGC AAG GCCC CCAGTATCGGCCGAC recA 1272709 - 1271525 - | recombinase A TERM 1312 1273227 - 1273202 - g 100 -15.4 -5.18643 | overlap 1273217 1273218 GCAACCAAAAGAAAA CGCCCGACGG AACAAG CCGCCGGGCG TTAGACGTCCAACAG BAD_1025 1272854 - 1273231 + | DNA-binding protein BAD_1026 1273746 - 1273246 - | DNA binding protein BAD_1027 1274390 - 1273818 - | CinA-like protein TERM 1313 1274313 - 1274367 + g 100 -13.4 -4.19953 | opp_overlap 1274318 GGCTTCGCAATAGCG TAAAACGGCTGCGGCCAGCTCATCGC ATT GCGATTGGCTGGCCGCGGTCGACGAA TTTTCGGATTCGCTC TERM 1314 1274362 - 1274318 - G 100 -19.9 -4.1964 | opp_overlap 1274313 CGCAATAGCGTAAAA CGGCTGCGGCCAGCTCATCGC ATT GCGATTGGCTGGCCGCGGTCG ACGAATTTTCGGATT pgsA3 1275065 - 1274391 - | DP-diacylglycerol--glycerol-3-phosphate 3- phosphatidyltransferase ftsK 1277929 - 1275125 - | DNA translocase ftsK BAD_1030 1278193 - 1281201 + | mannan endo-1,4-beta-mannosidase precursor TERM 1315 1281235 - 1281284 + T 89 -13.6 -3.53091 | gap 1, opp_overlap 1281242, overlap 1281239 TCTCACGTAGGACAT TACAAAACGGGGGTCCCGCAATC CAACT GGTTGCGGGACCCCCGCCC-GTA TTTCCGCAGAACCCT TERM 1316 1281239 - 1281281 + T 85 -15.5 -2.60496 | opp_overlap 1281242, overlap 1281235 ACGTAGGACATTACA AAACGGGGGTCCCGCAATC CAACT GGTTGCGGGACCCCCGCCC GTATTTCCGCAGAAC TERM 1317 1281278 - 1281242 - T 100 -24.6 -4.52047 | gap 1, opp_overlap 1281239 1281235 TAGGACATTACAAAA CGGGGGTCCCGCAATCC AACT GG-TTGCGGGACCCCCG CCCGTATTTCCGCAG miaA 1282340 - 1281330 - | tRNA delta(2)-isopentenylpyrophosphate transferase BAD_1032 1283766 - 1282324 - | hypothetical protein TERM 1318 1282454 - 1282475 + g 71 -5.7 -4.4009 | TCGCCTTCCGGCACG CCGACATGC ACGA GCACGCCGG TTTTCTCACGTCCGG TERM 1319 1283396 - 1283406 + g 78 -2.4 -5.04987 | CCGAACACGGCGTCG ACCC ACG GGGC TTTTTTCGCGATCTT BAD_1033 1283924 - 1284652 + | hypothetical protein TERM 1320 1284666 - 1284703 + T 100 -17.9 -4.59109 | opp_overlap 1284666 GATGTTTTCGGAAAA TGGCGATTGACGGACAA ATCA TTGCCTGTCAATCGCCA TTTTTCGACGATATC TERM 1321 1284703 - 1284666 - T 100 -17.9 -4.07885 | opp_overlap 1284666 GATGTTTTCGGAAAA TGGCGATTGACGGACAA ATCA TTGCCTGTCAATCGCCA TTTTTCGACGATATC BAD_1034 1285674 - 1284724 - | integral membrane protein with duf6 TERM 1322 1285760 - 1285738 - R 100 -13.5 -4.52589 | opp_overlap 1285711 1285738 TTCGCCGACAGAAAA GCCTGACCA TATTC TGGTCAGGC TTTGTTTGAGGGTTC TERM 1323 1285738 - 1285760 + r 100 -13.5 -4.43877 | opp_overlap 1285738, overlap 1285711 TTCGCCGACAGAAAA GCCTGACCA TATTC TGGTCAGGC TTTGTTTGAGGGTTC BAD_1035 1286682 - 1285801 - | hypothetical protein BAD_1036 1287569 - 1286799 - | hypothetical protein TERM 1324 1287175 - 1287189 + g 78 -2.1 -5.02476 | gap 1 CCTTCCATATCCTGA TC-GCC CTTC GGCTGA TTTTTTGCGGAGTCT BAD_1037 1287732 - 1289105 + | atypical histidine kinase sensor of two-component system BAD_1038 1289165 - 1289794 + | response regulator of two-component system TERM 1325 1291336 - 1291307 - g 79 -9.4 -4.24342 | overlap 1291330 CCCGCCATGAAGAAA CTTCTGCTCATC CGCGCC AACGAGCAGAAG GCCGGCTACCGCATC TERM 1326 1291534 - 1291499 - g 86 -14.8 -3.33399 | gap 1, opp_overlap 1291522 1291523, overlap 1291494 GCCAATGAAACCCAA GTCGCGCCACT-CGC CACGTAT GCGCAGCGGCGCGAC CGCATGCTGTTGTCG BAD_1039 1289912 - 1292026 + | hypothetical protein BAD_1040 1292794 - 1292090 - | response regulator of two-component system BAD_1041 1294008 - 1292794 - | histidine kinase sensor of two-component system BAD_1042 1294159 - 1295211 + | ABC transporter ATP-binding protein BAD_1043 1295256 - 1296506 + | hypothetical protein BAD_1044 1296493 - 1297782 + | hypothetical protein TERM 1327 1297787 - 1297835 + F 76 -12.5 -2.76162 | opp_overlap 1297785 1297784 1297824, overlap 1297786 TGGCCAAGTAAATCC CCAAGTGTTCCGTTCCATCGG CCGAGTC CCGATGGAACGGAACATCCGC CTTTGCCGTAGGCTC BAD_1045 1297898 - 1298290 + | hypothetical protein BAD_1046 1299841 - 1298315 - | hypothetical protein TERM 1328 1298783 - 1298773 - G 71 -6.8 -4.2558 | GATTGCCGACCAAAA TGCC GCC GGCA TTGCCCAGACCAAGG TERM 1329 1299752 - 1299716 - G 74 -5.8 -4.55128 | gap 1 ACGGGCAAACGAAAA CGTCGGGATATG-TAGG CCGA CCAGCCTTATCCCGACG TTGGGCCGAATATTG BAD_1047 1300495 - 1299929 - | putative muramidase ydeC 1300553 - 1301605 + | hypothetical protein TERM 1330 1301659 - 1301609 - T 100 -21.4 -5.1356 | gap 1, opp_overlap 1301612, overlap 1301648 TCCGAGGAATAAAAA CAATCGGCTGCGTGCCC-CACGC CGTCAC GCATAAGGACACGCAGCCGATTG CGTCACATCAAGCCG pstX 1301888 - 1301688 - | non-ribosomal peptide synthetase BAD_1050 1303067 - 1302078 - | hypothetical protein TERM 1331 1302820 - 1302848 + g 73 -13.8 -2.70932 | overlap 1302828 CCTCCATCTCCAACT GTCGGTCGCGCC TCCCC GGCTCGACCGGC TCGTTCCGCCCGGGC BAD_1051 1303370 - 1303092 - | LacI-type transcriptional regulator acn 1306202 - 1303503 - | aconitate hydratase ctpE 1308755 - 1306281 - | cation-transporting ATPase TERM 1332 1307791 - 1307812 + g 71 -5.7 -4.4017 | overlap 1307790 1307789 TCGTTGAGCATGATG CCGCCGTCG GTGA CGGTGCCGG TTTTGTCGAGGTTCA TERM 1333 1308122 - 1308135 + g 72 -2.3 -4.8543 | TGATGCCCTTGTTGA GGTCG GACA CGGTC TTTTTGTAGACCTTC BAD_1054 1309486 - 1308893 - | hypothetical protein BAD_1055 1310748 - 1309483 - | RNA methyltransferase TERM 1334 1310504 - 1310492 - G 71 -9.1 -3.74251 | GAGACGTGCACCAAA TCGGC ACC GCCGA CGCCGCCGCCCATGG BAD_1056 1311488 - 1310748 - | hypothetical protein TERM 1335 1311391 - 1311359 - G 73 -13.3 -2.78495 | overlap 1311356 1311354 TCACCACGAACACCA CGCCCGGCAGCATCG ATT CGACGACGCCGCGCG GACCGCCGATCGCGT TERM 1336 1311454 - 1311421 - G 73 -9.6 -3.95153 | opp_overlap 1311430 1311433 TCAATGACGGAGAAA TCGTCG-GCATCGCCG GCGT CGGCGA-GCGCGCCGA GGCCGGTTCTTTTCT TERM 1337 1311430 - 1311463 + g 100 -10.1 -4.84642 | opp_overlap 1311421, overlap 1311433 GAGAAATCGTCGGCA TCGCCGGCGTCGGCG AGCG CGCCGAGGCCGGTTC TTTTCTTGATTTCGG TERM 1338 1311433 - 1311460 + g 100 -18.4 -4.50353 | opp_overlap 1311421, overlap 1311430 AAATCGTCGGCATCG CCGGCGTCGGCG AGCG CGCCGAGGCCGG TTCTTTTCTTGATTT BAD_1057 1312366 - 1311518 - | hypothetical protein TERM 1339 1311767 - 1311757 - G 74 -6.8 -4.37886 | CGATGTTGGAGAAAA GCTG GTT CAGC GCCTTGGTTTCGGCG BAD_1058 1313349 - 1312489 - | exodeoxyribonuclease TERM 1340 1313406 - 1313376 - R 100 -17.1 -3.66784 | opp_overlap 1313381, overlap 1313381 CTAGCCGGAATACAA GAAAACCTCCCTT GTGGG AAGGGAGGTTTTC CAGATGGCTGACGCG TERM 1341 1313381 - 1313401 + r 88 -11.2 -4.11692 | opp_overlap 1313376 1313381 CGGAATACAAGAAAA CCTCCCTT GTGGG AAGGGAGG TTTTCCAGATGGCTG TERM 1342 1313401 - 1313381 - R 100 -11.2 -4.90381 | opp_overlap 1313381, overlap 1313376 CGGAATACAAGAAAA CCTCCCTT GTGGG AAGGGAGG TTTTCCAGATGGCTG dppD 1315432 - 1313423 - | dipeptide transport ATP-binding protein dppC 1316422 - 1315454 - | peptide ABC transporter permease dppB 1317369 - 1316443 - | peptide ABC transporter permease TERM 1343 1317287 - 1317258 - G 72 -12.9 -3.01712 | gap 1 GCTTGTCGCCGAACA TCGCCTTGACCGGG TCG CCCGG-CAACGCGA ACACCAGGGCATACA TERM 1344 1317627 - 1317658 + r 100 -17.5 -3.28416 | opp_overlap 1317627, overlap 1317631 1317635 TTTATTACGCGGAAA GGAAGGAACGGAT ATTCGA ATCCGTTCCTTCC TTCATGTCGATCCTA TERM 1345 1317658 - 1317627 - R 100 -17.5 -3.58343 | opp_overlap 1317627 1317631 1317635 TTTATTACGCGGAAA GGAAGGAACGGAT ATTCGA ATCCGTTCCTTCC TTCATGTCGATCCTA TERM 1346 1317631 - 1317654 + r 75 -11.1 -3.43338 | opp_overlap 1317627, overlap 1317627 1317635 TTACGCGGAAAGGAA GGAACGGAT ATTCGA ATCCGTTCC TTCCTTCATGTCGAT dppA2 1319373 - 1317697 - | ABC-type transpoter TERM 1347 1319445 - 1319406 - R 91 -10 -4.57073 | opp_overlap 1319405 1319406 1319409 GACCCTGCTCAAAAA GAAGGCGGGCGTCAATAC CGTG GCATCAACGTCCGTCTTC GTTCTGATGGTGGGT xerC 1320641 - 1319652 - | site-specific tyrosine recombinase XerC TERM 1348 1319928 - 1319916 - G 76 -5.5 -4.62069 | overlap 1319921 CTGCGATCCCAAAAA GAACG CGT CGTCC GACATGTCACCGCAT TERM 1349 1320144 - 1320158 + g 83 -2.1 -5.27779 | gap 1, overlap 1320136 CATGGCCGCGTCACG CA-GCG CGAT CGCCTG TTTTTTCATATTCGG BAD_1064 1320745 - 1321590 + | putative ABC transporter ATP-binding protein BAD_1065 1321587 - 1324433 + | putative ABC transport system integral membrane protein TERM 1350 1324803 - 1324754 - T 100 -17.4 -3.53811 | gap 1, opp_overlap 1324761, overlap 1324756 1324759 1324761 CCTACCGCGCGCAAA GACAAGAGCGCCGCAATCGCA CTGATTTTC TGCGATTGCGGCGCTTTTG-C ATAGCGATGGCGTCA TERM 1351 1324802 - 1324756 - T 100 -21.1 -3.34715 | opp_overlap 1324761, overlap 1324754 1324759 1324761 TACCGCGCGCAAAGA CAAGAGCGCCGCAATCGCA CTGATTTTC TGCGATTGCGGCGCTTTTG CATAGCGATGGCGTC TERM 1352 1324799 - 1324759 - T 100 -17 -3.81488 | opp_overlap 1324761, overlap 1324756 1324754 1324761 CGCGCGCAAAGACAA GAGCGCCGCAATCGCA CTGATTTTC TGCGATTGCGGCGCTT TTGCATAGCGATGGC TERM 1353 1324761 - 1324797 + T 100 -19.6 -4.18494 | opp_overlap 1324759 1324756 1324754 1324761 CGCGCAAAGACAAGA GCGCCGCAATCGCA CTGATTTTC TGCGATTGCGGCGC TTTTGCATAGCGATG TERM 1354 1324797 - 1324761 - T 100 -19.6 -3.49232 | opp_overlap 1324761, overlap 1324759 1324756 1324754 CGCGCAAAGACAAGA GCGCCGCAATCGCA CTGATTTTC TGCGATTGCGGCGC TTTTGCATAGCGATG tyrA 1325863 - 1324823 - | prephenate dehydrogenase pheA 1326837 - 1325857 - | chorismate mutase BAD_1068 1327467 - 1326907 - | hypothetical protein TERM 1355 1327555 - 1327502 - R 100 -14.2 -3.79419 | gap 2, opp_overlap 1327510, overlap 1327503 1327506 1327510 GTTCCTTACAAAACA GCAAGAAAGGCAAGAGATA-C-GCGG AAAA CCGCCGACATCTCTTGCCTTTCTTAA GCGTTTAGCTCACTA TERM 1356 1327554 - 1327503 - R 95 -17.7 -2.8733 | gap 2, opp_overlap 1327510, overlap 1327502 1327506 1327510 TTCCTTACAAAACAG CAAGAAAGGCAAGAGATA-C-GCGG AAAA CCGCCGACATCTCTTGCCTTTCTTA AGCGTTTAGCTCACT TERM 1357 1327551 - 1327506 - R 100 -17.2 -3.57825 | gap 2, opp_overlap 1327510, overlap 1327503 1327502 1327510 CTTACAAAACAGCAA GAAAGGCAAGAGATA-C-GCGG AAAA CCGCCGACATCTCTTGCCTTTC TTAAGCGTTTAGCTC TERM 1358 1327547 - 1327510 - R 95 -12.2 -4.38843 | gap 2, opp_overlap 1327510, overlap 1327506 1327503 1327502 CAAAACAGCAAGAAA GGCAAGAGATA-C-GCGG AAAA CCGCCGACATCTCTTGCC TTTCTTAAGCGTTTA TERM 1359 1327510 - 1327547 + r 83 -10 -4.19371 | gap 2, opp_overlap 1327510 1327506 1327503 1327502 CAAAACAGCAAGAAA GGCAAGAGAT-AC-GCGG AAAA CCGCCGACATCTCTTGCC TTTCTTAAGCGTTTA BAD_1069 1329549 - 1327618 - | GTP-binding elongation factor TypA/BipA TERM 1360 1329713 - 1329678 - R 100 -20.5 -4.26589 | ACGACACATGGAAAA CGGCGGACCTGTCAG ATCATG CCGACAGGCCCGCCG TCAATCGCGCGAAGA BAD_1070 1331096 - 1329741 - | sugar transporter BAD_1071 1331967 - 1331164 - | hypothetical protein TERM 1361 1332047 - 1332025 - R 76 -12.2 -3.0873 | opp_overlap 1332025, overlap 1332014 GAAAGGAGTCTAACA CTTATAGTCA ACA TGACTATAAG TGTGTCGAGTCGCTC TERM 1362 1332025 - 1332047 + r 75 -12.2 -2.89881 | opp_overlap 1332014 1332025 GAAAGGAGTCTAACA CTTATAGTCA ACA TGACTATAAG TGTGTCGAGTCGCTC TERM 1363 1332097 - 1332068 - R 71 -8.5 -3.86346 | opp_overlap 1332076, overlap 1332070 1332071 CGAGTCGCTCATAAA CACCAAGAGCCCC CAAC GGGGCTCTTGCAA AGTTCAGGCCACGAT TERM 1364 1332095 - 1332070 - R 89 -13.3 -3.52113 | opp_overlap 1332076, overlap 1332068 1332071 AGTCGCTCATAAACA CCAAGAGCCCC CAAC GGGGCTCTTGC AAAGTTCAGGCCACG TERM 1365 1332094 - 1332071 - R 90 -16.8 -2.70946 | opp_overlap 1332076, overlap 1332070 1332068 GTCGCTCATAAACAC CAAGAGCCCC CAAC GGGGCTCTTG CAAAGTTCAGGCCAC BAD_1072 1332940 - 1332101 - | hypothetical protein xerD 1333992 - 1333039 - | tyrosine recombinase xerD TERM 1366 1333409 - 1333431 + g 73 -9.8 -3.57971 | GCGTAACTGCCGACC GGCACCAGAC GTT GTTTGGAGCC TTTGCCCATCAATCT TERM 1367 1334207 - 1334176 - R 100 -16.7 -3.13475 | gap 1, opp_overlap 1334179, overlap 1334179 GAACGCGATACGCAA GAACCCCCG-TCCG TTTGC CGGATCGGGGGTTC TGAAGTTCACAGGTG TERM 1368 1334179 - 1334204 + r 84 -12.6 -3.36492 | gap 1, opp_overlap 1334179 1334176 CGCGATACGCAAGAA CCCCCG-TCCG TTTGC CGGATCGGGGG TTCTGAAGTTCACAG TERM 1369 1334204 - 1334179 - R 86 -12.6 -3.70773 | gap 1, opp_overlap 1334179, overlap 1334176 CGCGATACGCAAGAA CCCCCG-TCCG TTTGC CGGATCGGGGG TTCTGAAGTTCACAG rplT 1334621 - 1334238 - | 50S ribosomal protein L20 TERM 1370 1334324 - 1334308 - G 70 -10.1 -3.5393 | ACGATGGCCTTGAAA GCCTCCG GAT CGGAGAC GGCCAGCTCGGCGAG rpmI 1334868 - 1334674 - | 50S ribosomal protein L35 infC 1335807 - 1334887 - | translation initiation factor IF-3 TERM 1371 1335758 - 1335772 + g 71 -5.6 -4.42976 | CTGAAAGGCTTCCAG GTGGGG ATA TCCCGC TTTCTTGATTTCTCA TERM 1372 1335851 - 1335802 - G 100 -21.5 -3.48772 | gap 1, opp_overlap 1335807, overlap 1335804 1335807 1335809 AAGCCTTGTAGATAA TAC-CACACCCCGGGACCAGCGCG TGT CGCACCGGTCCCGGGGTGTTCGTC ACCATTCGGACGGCA TERM 1373 1335848 - 1335804 - G 100 -24.3 -3.31726 | opp_overlap 1335807, overlap 1335802 1335807 1335809 GCCTTGTAGATAATA CCACACCCCGGGACCAGCGCG TGT CGCACCGGTCCCGGGGTGTTC GTCACCATTCGGACG TERM 1374 1335845 - 1335807 - R 100 -30.4 -2.83249 | opp_overlap 1335807, overlap 1335804 1335802 1335809 TTGTAGATAATACCA CACCCCGGGACCAGCGCG TGT CGCACCGGTCCCGGGGTG TTCGTCACCATTCGG TERM 1375 1335807 - 1335845 + r 100 -26 -3.16742 | opp_overlap 1335807 1335804 1335802 1335809 TTGTAGATAATACCA CACCCCGGGACCAGCGCG TGT CGCACCGGTCCCGGGGTG TTCGTCACCATTCGG TERM 1376 1335843 - 1335809 - R 100 -27.2 -2.96183 | opp_overlap 1335807, overlap 1335807 1335804 1335802 GTAGATAATACCACA CCCCGGGACCAGCGCG TGT CGCACCGGTCCCGGGG TGTTCGTCACCATTC asnH 1337760 - 1335874 - | asparagine synthetase TERM 1377 1336181 - 1336160 - G 72 -13.7 -2.62184 | opp_overlap 1336159 1336157 1336155 1336180 TCCTTGGGCAGATGA CGTCCCGCC GCCT GGCGGAACG CGTATTTCGTGTTCT BAD_1078 1337949 - 1338695 + | hypothetical protein gap 1338867 - 1339922 + | glyceraldehyde 3-phosphate dehydrogenase C TERM 1378 1339971 - 1339996 + F 100 -16.9 -4.34402 | opp_overlap 1339971 GAACCTCAGAACAAA GGGGCTTTCGC TTCG GCGGAAGCCCC TTTTCGTATCCGAAA TERM 1379 1339996 - 1339971 - f 100 -14.7 -4.33248 | opp_overlap 1339971 GAACCTCAGAACAAA GGGGCTTTCGC TTCG GCGGAAGCCCC TTTTCGTATCCGAAA BAD_1080 1340041 - 1340556 + | hypothetical protein TERM 1380 1340633 - 1340582 - T 100 -21.1 -3.31983 | opp_overlap 1340589, overlap 1340589 GATACATCACACCAA TACATAAGTGGGTGGTCGGAACA ACACGA TGTTCCGACCGCCCACTTGCGTA AGCGAAAGGTTCGCG TERM 1381 1340589 - 1340626 + T 100 -22.2 -3.05384 | opp_overlap 1340582 1340589 CACACCAATACATAA GTGGGTGGTCGGAACA ACACGA TGTTCCGACCGCCCAC TTGCGTAAGCGAAAG TERM 1382 1340626 - 1340589 - T 100 -20 -3.71793 | opp_overlap 1340589, overlap 1340582 CACACCAATACATAA GTGGGTGGTCGGAACA ACACGA TGTTCCGACCGCCCAC TTGCGTAAGCGAAAG ispH 1341680 - 1340649 - | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase TERM 1383 1340867 - 1340881 + g 73 -4.2 -4.58395 | opp_overlap 1340851 1340854 GATGGGCGCGACCAG CGGC GCCAACA GCCG TTTTTGAGGCGTACC TERM 1384 1341478 - 1341464 - G 74 -12.8 -3.13522 | overlap 1341462 ATTCCTGCACGAACA CCGCGC CCT GCGCGG CCAAATCCTCGACGA TERM 1385 1341540 - 1341566 + g 73 -10.8 -3.58343 | opp_overlap 1341530 ATACACCGGCGGCAA TCCGTCGGCACG TGG CGTATCGGCGGA TTTGAGAATCGTCCG BAD_1082 1341840 - 1342790 + | hypothetical protein TERM 1386 1343012 - 1343054 + T 81 -13 -3.0263 | opp_overlap 1343012 1343019, overlap 1343019 TAGCGTCACAGAGCA TG-GAAAACCCCGCGGAATC ATTAC GGTT-CGCGGGGTTTTCCCA TATTCAGACGCTGAT TERM 1387 1343053 - 1343012 - T 75 -13.1 -2.69468 | gap 1, opp_overlap 1343012 1343019, overlap 1343019 TAGCGTCACAGAGCA TGGAAAACCCCGCGGAATCA TTA CGGTT-CGCGGGGTTTTCCC ATATTCAGACGCTGA TERM 1388 1343019 - 1343046 + T 83 -9.9 -4.1964 | gap 1, opp_overlap 1343019 1343012, overlap 1343012 ACAGAGCATGGAAAA CCCCGCGGAATC ATTAC GGTT-CGCGGGG TTTTCCCATATTCAG TERM 1389 1343046 - 1343019 - T 81 -8.4 -4.23054 | gap 1, opp_overlap 1343012 1343019, overlap 1343012 ACAGAGCATGGAAAA CCCCGCGGAATCA TTA CGGTT-CGCGGGG TTTTCCCATATTCAG BAD_1083 1343388 - 1343137 - | hypothetical protein sigH 1343975 - 1343385 - | RNA polymerase sigma factor RpoE murE 1344097 - 1345650 + | UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase BAD_1086 1345670 - 1346914 + | hypothetical protein racD 1346911 - 1347636 + | aspartate racemase TERM 1390 1347734 - 1347687 - T 100 -16.5 -4.46212 | gap 1, opp_overlap 1347688 1347690, overlap 1347690 CGTCGGACGATAAAA CAAGATTGTGGGTGGCTTCCCA TTGCC TGGGGAGCCACCCATAATCT-G TTTTACATGGACGGT TERM 1391 1347688 - 1347734 + T 100 -21.1 -4.18197 | opp_overlap 1347687 1347690, overlap 1347690 GTCGGACGATAAAAC AAGATTGTGGGTGGCTTCCCA TTGCC TGGGGAGCCACCCATAATCTG TTTTACATGGACGGT TERM 1392 1347690 - 1347732 + T 100 -23.7 -3.69216 | opp_overlap 1347690 1347687, overlap 1347688 CGGACGATAAAACAA GATTGTGGGTGGCTTCCCA TTGCC TGGGGAGCCACCCATAATC TGTTTTACATGGACG TERM 1393 1347732 - 1347690 - T 100 -19.3 -4.35042 | opp_overlap 1347688 1347690, overlap 1347687 CGGACGATAAAACAA GATTGTGGGTGGCTTCCCA TTGCC TGGGGAGCCACCCATAATC TGTTTTACATGGACG TERM 1394 1347740 - 1347781 + T 76 -8.9 -4.02051 | overlap 1347742 CCATAATCTGTTTTA CAT-GGACGGTGTACGCCG CACGTA TGGCGT-CATCGTCCGATG TTGTTTCGCTTCGTC folC 1349393 - 1347795 - | folylpolyglutamate synthase pepP 1349573 - 1351177 + | Xaa-Pro aminopeptidase BAD_1090 1351187 - 1351708 + | hypothetical protein TERM 1395 1351728 - 1351776 + T 100 -27.1 -3.19371 | opp_overlap 1351728 1351733 1351734, overlap 1351734 GCCTTCCATACATCA TAAAATGGAATCCCCGCAACGTT TCA AGCGTTGCGGGGATTCCTTTTTA TTAGATTCCGTGGAT TERM 1396 1351776 - 1351728 - T 100 -24.9 -2.69151 | opp_overlap 1351728 1351734, overlap 1351733 1351734 GCCTTCCATACATCA TAAAATGGAATCCCCGCAACGTT TCA AGCGTTGCGGGGATTCCTTTTTA TTAGATTCCGTGGAT TERM 1397 1351771 - 1351733 - T 100 -20.4 -4.53163 | opp_overlap 1351728 1351734, overlap 1351728 1351734 CCATACATCATAAAA TGGAATCCCCGCAACGTT TCA AGCGTTGCGGGGATTCCT TTTTATTAGATTCCG TERM 1398 1351770 - 1351734 - T 100 -23.9 -3.31175 | opp_overlap 1351728 1351734, overlap 1351733 1351728 CATACATCATAAAAT GGAATCCCCGCAACGTT TCA AGCGTTGCGGGGATTCC TTTTTATTAGATTCC TERM 1399 1351734 - 1351770 + T 100 -26.1 -5.13741 | opp_overlap 1351734 1351733 1351728, overlap 1351728 CATACATCATAAAAT GGAATCCCCGCAACGTT TCA AGCGTTGCGGGGATTCC TTTTTATTAGATTCC dppD 1353508 - 1351796 - | ATP binding protein of ABC transporter BAD_1092 1354688 - 1353513 - | peptide ABC transporter permease TERM 1400 1353565 - 1353581 + g 73 -8.7 -3.92869 | opp_overlap 1353552 1353555, overlap 1353566 AATGACGGATCACGG TCGGTGA CGG TCACCGG TTTGTCGCTGGCTCC BAD_1093 1355763 - 1354690 - | peptide ABC transporter permease TERM 1401 1355843 - 1355803 - R 88 -11.3 -4.12532 | gap 2, opp_overlap 1355800 1355804, overlap 1355807 TGTTTCAGATACAAA TTGA--GCCCCTGCCCATC TTAAG GGTGGGCAGGGGCGATCAA AACCTTTATCAGGCC TERM 1402 1355837 - 1355807 - R 95 -18.3 -2.74987 | opp_overlap 1355804 1355800, overlap 1355803 TCAGATACAAATTGA GCCCCTGCCCATC TTAAG GGTGGGCAGGGGC GATCAAAACCTTTAT BAD_1094 1357477 - 1355852 - | solute-binding protein of ABC transporter for peptides TERM 1403 1358966 - 1358950 - g 70 -10.1 -3.56092 | overlap 1358938 GCACGATCCCCGAAA TCGGGCG CAA CACCCGA ATCACCCTGTCCGCC BAD_1095 1357869 - 1359071 + | ROK family transcriptional regulator TERM 1404 1359240 - 1359212 - g 76 -12.3 -3.29144 | overlap 1359223 1359224 1359227 CCACGCGTCCCAGAA CGGCGCAGAAAGC TAC GCCATCAGCGCCG TCGGTAACGACGAGC BAD_1096 1359102 - 1360001 + | PfkB family sugar kinase TERM 1405 1360030 - 1360061 + T 100 -18.9 -5.77853 | TTTCATCATCACCGA TTCCGCATGCCGT CAAATA ACGGCATGCGGAA TTTTTTTTACCGGTT BAD_1097 1360667 - 1360365 - | DEAD/DEAH box helicase-like TERM 1406 1360516 - 1360506 - G 78 -4.6 -4.83169 | ATGGGGGCAGAAAAA CCGC CGC ACGG CCAGCAGACTACGCA TERM 1407 1360597 - 1360614 + g 100 -12.7 -4.72863 | opp_overlap 1360597 CTCCACGGATTGAAA GCCGCCA GAAA TGGCGGC TTTTCCTTTATTTCC TERM 1408 1360614 - 1360597 - G 82 -12.7 -3.6682 | opp_overlap 1360597 CTCCACGGATTGAAA GCCGCCA GAAA TGGCGGC TTTTCCTTTATTTCC TERM 1409 1360852 - 1360815 - H 74 -8.3 -3.97674 | GTATCATCGAAATAA CCGTCCGGCGCCTTCCA ATAT TACAAGCCGCCGGCCAG CCAACCATCGAAAGG BAD_1098 1360877 - 1361281 + | hypothetical protein TERM 1410 1361375 - 1361321 - T 95 -15.1 -3.67296 | gap 1, opp_overlap 1361324 1361325, overlap 1361329 TACCATCCATCCAAA CGCGGAAACGCGCTCTGGCCCTCCCT TGGA AAGAAGGTCCAGAGCGCGTTTC-GTT TTTCTGTCAAGACAA TERM 1411 1361324 - 1361373 + T 100 -17.9 -4.96848 | opp_overlap 1361321 1361329, overlap 1361325 CATCCATCCAAACGC GGAAACGCGCTCTGGCCCTCCCT TGGA AAGAAGGTCCAGAGCGCGTTTCG TTTTTCTGTCAAGAC TERM 1412 1361325 - 1361372 + T 100 -21.4 -3.57627 | opp_overlap 1361321 1361329, overlap 1361324 ATCCATCCAAACGCG GAAACGCGCTCTGGCCCTCCCT TGGA AAGAAGGTCCAGAGCGCGTTTC GTTTTTCTGTCAAGA TERM 1413 1361368 - 1361329 - T 100 -20.8 -3.64236 | opp_overlap 1361325 1361324, overlap 1361321 ATCCAAACGCGGAAA CGCGCTCTGGCCCTCCCT TGGA AAGAAGGTCCAGAGCGCG TTTCGTTTTTCTGTC ftsQ 1362436 - 1361447 - | cell division protein murC 1364001 - 1362436 - | UDP-N-acetylmuramate--L-alanine ligase TERM 1414 1364038 - 1364078 + r 89 -13.4 -3.62522 | gap 1 TTCAAGCTCATTTCA TTATGGCCGCA-CCCATGG TCTC CCACGGGGTGCGGTCATGA TTGTTCGGCCGGTTA murG 1365272 - 1364091 - | N-acetylglucosaminyl transferase fstW 1366587 - 1365394 - | FtsW-like protein murD 1368067 - 1366628 - | UDP-N-acetylmuramoylalanine--D-glutamate ligase TERM 1415 1368113 - 1368138 + r 75 -12.6 -2.62184 | opp_overlap 1368126 1368127 GATAGCACACTTATA TTGCGGGCGT AAAGCC GCGCCCGCAA TCGTGTCACAGGCCG mraY 1369241 - 1368144 - | phospho-N-acetylmuramoyl-pentapeptide-transferase murF 1370760 - 1369291 - | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase BAD_1106 1371693 - 1370836 - | hypothetical protein TERM 1416 1371186 - 1371158 - G 77 -14.6 -2.83012 | gap 1, opp_overlap 1371159, overlap 1371145 AACGCGAGGATCACA GCGGC-TGCGCCG TCTT CGGCGCACACCGC CATGGTACGTTGCAC ftsI 1373551 - 1371749 - | peptidoglycan synthetase; penicillin-binding protein 3 TERM 1417 1373193 - 1373158 - G 72 -12.5 -3.04144 | gap 1, opp_overlap 1373192 CGTCCATGCCCAATA CGGGGGCCAGCAGACG AGCCA CGGCTGC-GGCTCCCG TCACGCCGACCGGCT BAD_1108 1374009 - 1373548 - | hypothetical protein mraW 1375042 - 1374011 - | S-adenosyl-methyltransferase mraZ 1375557 - 1375042 - | protein mraZ TERM 1418 1375772 - 1375797 + H 72 -4 -4.72272 | GCCGCTCGTAGAAGC CTTGGGGTAC ATTAGA GTGCCTTAAG TTTTTGATGAAGGGA TERM 1419 1376126 - 1376150 + G 79 -12.7 -3.48276 | GCCGATTCTCACCGA CTGGCGCGCCG ACG CGGCACGCCCG TTCTATGAGGCGACG BAD_1111 1375818 - 1378115 + | hypothetical protein serA 1378096 - 1379307 + | D-3-phosphoglycerate dehydrogenase TERM 1420 1379331 - 1379379 + T 100 -31.4 -3.02074 | gap 1, opp_overlap 1379334, overlap 1379334 1379372 TACGAAACGTTACGA TAATGCGGGCGGGGTTCCAA-CC ATCA GGATTGGAACCCCGCCCGCATTA TATATGCTGTATTTG TERM 1421 1379334 - 1379376 + T 100 -28.7 -3.63762 | gap 1, opp_overlap 1379334, overlap 1379331 1379372 GAAACGTTACGATAA TGCGGGCGGGGTTCCAA-CC ATCA GGATTGGAACCCCGCCCGCA TTATATATGCTGTAT TERM 1422 1379376 - 1379334 - T 100 -30.1 -3.43288 | opp_overlap 1379334 1379331 1379372 GAAACGTTACGATAA TGCGGGCGGGGTTCCAACC ATCAG GATTGGAACCCCGCCCGCA TTATATATGCTGTAT nrdR 1379936 - 1379424 - | transcriptional regulator NrdR BAD_1114 1380231 - 1379926 - | hypothetical protein lexA 1380319 - 1381092 + | LexA repressor TERM 1423 1381163 - 1381111 - T 100 -27.3 -3.63627 | opp_overlap 1381118, overlap 1381112 1381118 CTTTCACACGTTAAA CGGCAAAGGGCGTCGAACATACC ATTTTGA GGCATGTCCGACGCCCTTTGCCA TACCCTTTGCCATAC TERM 1424 1381162 - 1381112 - T 100 -28.6 -2.77962 | opp_overlap 1381118, overlap 1381111 1381118 TTTCACACGTTAAAC GGCAAAGGGCGTCGAACATACC ATTTTGA GGCATGTCCGACGCCCTTTGCC ATACCCTTTGCCATA TERM 1425 1381118 - 1381156 + T 95 -14.6 -3.61371 | opp_overlap 1381112 1381111 1381118 ACGTTAAACGGCAAA GGGCGTCGAACATACC ATTTTGA GGCATGTCCGACGCCC TTTGCCATACCCTTT TERM 1426 1381156 - 1381118 - T 100 -19 -3.71917 | opp_overlap 1381118, overlap 1381112 1381111 ACGTTAAACGGCAAA GGGCGTCGAACATACC ATTTTGA GGCATGTCCGACGCCC TTTGCCATACCCTTT BAD_1116 1382213 - 1381272 - | cation efflux protein TERM 1427 1382331 - 1382295 - R 100 -13.8 -4.08216 | gap 1, opp_overlap 1382297 1382297 1382304, overlap 1382299 1382304 TCATTCGTCTCAAAA CGCAGGAAACCCCAGCC CGAA GGCTGGGGTTTCCAA-G TTCTGCTGACAGCCT TERM 1428 1382297 - 1382331 + r 95 -15.1 -3.40522 | gap 1, opp_overlap 1382295 1382299 1382304, overlap 1382297 1382304 ATTCGTCTCAAAACG C-AGGAAACCCCAGCC CGAA GGCTGGGGTTTCCAAG TTCTGCTGACAGCCT TERM 1429 1382297 - 1382330 + r 83 -15.3 -2.64099 | opp_overlap 1382295 1382299 1382304, overlap 1382297 1382304 ATTCGTCTCAAAACG CAGGAAACCCCAGCC CGAA GGCTGGGGTTTCCAA GTTCTGCTGACAGCC TERM 1430 1382328 - 1382299 - R 100 -22.3 -2.74605 | opp_overlap 1382297 1382297 1382304, overlap 1382295 1382304 TCGTCTCAAAACGCA GGAAACCCCAGCC CGAA GGCTGGGGTTTCC AAGTTCTGCTGACAG TERM 1431 1382323 - 1382304 - R 100 -15 -3.84284 | opp_overlap 1382304 1382297 1382297, overlap 1382299 1382295 TCAAAACGCAGGAAA CCCCAGCC CGAA GGCTGGGG TTTCCAAGTTCTGCT TERM 1432 1382304 - 1382323 + r 95 -15 -3.62859 | opp_overlap 1382299 1382295 1382304, overlap 1382297 1382297 TCAAAACGCAGGAAA CCCCAGCC CGAA GGCTGGGG TTTCCAAGTTCTGCT ldh2 1383497 - 1382388 - | L-lactate dehydrogenase 2 hflX 1385109 - 1383613 - | GTP-binding protein BAD_1119 1385246 - 1385857 + | hypothetical protein TERM 1433 1386739 - 1386711 - g 71 -6.6 -4.20696 | gap 1 CCACGAATTCGAAAA CGCGCTGCGCCGC CATT ACGG-ACCGCGCG CGGTGGACATGCGCC TERM 1434 1388060 - 1388042 - g 74 -11 -3.53811 | GGTACTCCGCCGAAA TCGACCCA GCG TGGGCCGA ACCGCTCGCCGGAGC hrpA 1385854 - 1389963 + | ATP-dependent helicase TERM 1435 1389965 - 1389951 - f 72 -3.5 -4.77157 | GCAACGCATCAAAAA GGCCA TCGCC TAGCC ACCGACCAAACAACC TERM 1436 1390385 - 1390357 - g 74 -13.1 -3.22475 | opp_overlap 1390346, overlap 1390355 GGTACGTGTAGAACA CGTAGCTTGCGGC CGC GCCGCACACCACG TCGAGCACGCCCAGC BAD_1121 1390037 - 1391062 + | hypothetical protein BAD_1122 1391115 - 1392041 + | hypothetical protein TERM 1437 1392133 - 1392189 + T 91 -10 -4.61868 | gap 1, opp_overlap 1392122 1392133 1392144, overlap 1392141 1392144 TAGACGTGTGCGAAA CG-CACGAGCAAGGCCGCCGCCCGG TTTATGTT CCGGACGGCGGCCTCGTGTATGACG TTTTGTCTATCGATG TERM 1438 1392189 - 1392133 - T 81 -12.2 -3.54129 | gap 1, opp_overlap 1392133 1392141 1392144, overlap 1392122 1392144 TAGACGTGTGCGAAA CG-CACGAGCAAGGCCGCCGCCCGG TTTATGTT CCGGACGGCGGCCTCGTGTATGACG TTTTGTCTATCGATG TERM 1439 1392141 - 1392180 + T 95 -17.8 -2.95339 | opp_overlap 1392133 1392144, overlap 1392133 1392144 TGCGAAACGCACGAG CAAGGCCGCCGCCCGG TTTATGTT CCGGACGGCGGCCTCG TGTATGACGTTTTGT TERM 1440 1392177 - 1392144 - T 100 -20.3 -3.23984 | opp_overlap 1392144 1392141 1392133, overlap 1392133 GAAACGCACGAGCAA GGCCGCCGCCCGG TTTATGTT CCGGACGGCGGCC TCGTGTATGACGTTT TERM 1441 1392144 - 1392177 + T 95 -18.1 -2.70543 | opp_overlap 1392133 1392144, overlap 1392141 1392133 GAAACGCACGAGCAA GGCCGCCGCCCGG TTTATGTT CCGGACGGCGGCC TCGTGTATGACGTTT glnA2 1393550 - 1392213 - | glutamine synthetase 2 TERM 1442 1393164 - 1393188 + g 76 -7.1 -4.47271 | overlap 1393165 GTAGAACTCGATTTC CGGATGCACGT AGA ACGTGAATCCC TTTTCCTTGGCTTTG TERM 1443 1393524 - 1393497 - G 74 -12 -3.44529 | gap 1, overlap 1393494 CCATAGACGAATGAA GCGCACG-TCGCG TTC CTCGACCGTGCGC AAAGCAAACTCTTGC hisA 1394338 - 1393613 - | 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase TERM 1444 1394353 - 1394383 + r 72 -11.2 -3.09492 | overlap 1394350 TGTCATACCTTTCGT TGCGTTGAACGGTT TTC GGCCGTTCAACGGA TCTTGCGATTACCGA hisH 1395097 - 1394450 - | imidazole glycerol phosphate synthase subunit HisH BAD_1126 1395919 - 1395149 - | hypothetical protein hisB 1396518 - 1395919 - | imidazoleglycerol-phosphate dehydratase TERM 1445 1396574 - 1396606 + r 100 -17.8 -3.87201 | GCTACGATATTGCGA TTGCGGTGGTTGCG TCTTC CGCAGCCACCGCGA TTCTGTTCTGTTTCA hisC 1397864 - 1396689 - | histidinol-phosphate aminotransferase hisD 1399396 - 1397861 - | histidinol dehydrogenase TERM 1446 1399416 - 1399377 - G 76 -7 -4.57073 | overlap 1399379 1399381 GATTTCCGCGAAAAA TATATGCCGGTCGACGCC ATTC AGCATCGGCCGGCAATCA AAAACCTGTTCAGGT TERM 1447 1399413 - 1399379 - G 73 -9.3 -3.90048 | gap 1, overlap 1399377 1399381 TTTCCGCGAAAAATA TATGCCGGTCGACGCC ATTC AGCATCGGCCGGCA-A TCAAAAACCTGTTCA TERM 1448 1399412 - 1399381 - G 90 -14.4 -3.53855 | overlap 1399379 1399377 TCCGCGAAAAATATA TGCCGGTCGACGCC ATTC AGCATCGGCCGGCA ATCAAAAACCTGTTC dnaE 1403044 - 1399454 - | DNA polymerase III subunit alpha TERM 1449 1401058 - 1401081 + g 71 -8.2 -4.07568 | opp_overlap 1401058 1401057 TCAGTGCGGAAATAT CGTTGAAGTT GTTC GGCTTCAACG TTTTCAGCAGCGAGC TERM 1450 1402363 - 1402373 + g 78 -2.4 -5.07567 | TGGTGGCCAGCAGCG GCGC GTT GAGC TTTTTTGCGATGTCG BAD_1131 1404037 - 1403108 - | hypothetical protein lspA 1404597 - 1404034 - | lipoprotein signal peptidase TERM 1451 1404556 - 1404581 + g 78 -10.3 -3.89131 | opp_overlap 1404556, overlap 1404551 CGCAATACACGCAAA GACGGCCACGC GGTC GCGCAGCCGTC TTTGATCATTCTTCA TERM 1452 1404581 - 1404556 - G 93 -14.7 -3.76775 | opp_overlap 1404551 1404556 CGCAATACACGCAAA GACGGCCACGC GGTC GCGCAGCCGTC TTTGATCATTCTTCA BAD_1133 1406217 - 1404619 - | hypothetical protein BAD_1134 1406608 - 1406327 - | hypothetical protein TERM 1453 1406662 - 1406640 - R 100 -13.4 -4.77165 | opp_overlap 1406637 1406635 GCGCGCATAACAAAA TGCCCCCGCT TTC AGTGGGGGCA TAATCGTCTGATTTG BAD_1135 1407182 - 1406700 - | hypothetical protein ftsZ 1408445 - 1407213 - | cell division protein FtsZ TERM 1454 1407439 - 1407450 + g 78 -7.2 -4.63218 | overlap 1407437 1407436 1407439 ACCGTGTTTCCCTTG GCCG CGGC CGGC TTTTCTTCGGCCGGC TERM 1455 1408493 - 1408528 + r 90 -4.7 -5.32608 | gap 1 CTATCGCAATCGCGC CGATGATACGCGCACT TTTCC AG-GCGTGTACCACCG TTTTTTCACTTTTTT BAD_1137 1409851 - 1408622 - | NifR3-like protein TERM 1456 1409487 - 1409499 + g 71 -7.7 -4.08945 | TGGTCGGCCATGTTC TCGTC GAT GACGA TTTTCGCGGCCTGCT TERM 1457 1409817 - 1409776 - G 74 -13 -3.19653 | gap 2, opp_overlap 1409776 1409775, overlap 1409767 TTATAACGGGAGGAA CCGACG-GC-CGTTCCGCGT CGGT ACGCGGGTCGAGCACGTCGG ATTCCTCGTAGGCAT TERM 1458 1409776 - 1409817 + g 76 -15.2 -2.52635 | gap 2, opp_overlap 1409767 1409776, overlap 1409775 TTATAACGGGAGGAA CCGACG-GC-CGTTCCGCGT CGGT ACGCGGGTCGAGCACGTCGG ATTCCTCGTAGGCAT glyS 1411368 - 1409893 - | glycyl-tRNA synthetase TERM 1459 1411332 - 1411318 - G 81 -5.6 -4.85782 | GGCGGGAAAAACAAA GCCACG ACG CTTGGC GAGGGATACGACTTC BAD_1139 1411528 - 1412679 + | hypothetical protein BAD_1140 1413276 - 1412704 - | hypothetical protein pstC 1413874 - 1413284 - | phosphate ABC transporter TERM 1460 1413538 - 1413512 - G 74 -5.8 -4.56775 | ATTGTTCTCGAAAAA GTCGAGGCTG CCGCTAT CAACCACGAC GTCCCCAATAGTCGG BAD_1142 1415459 - 1414584 - | hypothetical protein TERM 1461 1415533 - 1415515 - H 85 -8.8 -4.4648 | overlap 1415516 ACCCCCACGATAAAA TCCGGTAG CTG CTACCGGT CAAATTACGGCACGC TERM 1462 1415532 - 1415516 - H 78 -12.3 -3.27406 | overlap 1415515 CCCCCACGATAAAAT CCGGTAG CTG CTACCGG TCAAATTACGGCACG TERM 1463 1416068 - 1416053 - g 78 -4.6 -4.76041 | TACATCGATGAAAAA CAGCGC TTCT ACGCCG ACGTGACTGCCGGCA BAD_1143 1415612 - 1416130 + | transcriptional regulator thiM 1416412 - 1417296 + | hydroxyethylthiazole kinase BAD_1145 1417440 - 1418195 + | bifunctional protein thiEC thiD 1418324 - 1419166 + | phosphomethylpyrimidine kinase BAD_1147 1419255 - 1419620 + | hypothetical protein TERM 1464 1419654 - 1419697 + F 85 -9 -4.48299 | gap 1, opp_overlap 1419663 1419684 1419685, overlap 1419663 AACGAAACCATTCCA TGTAAAAAAGCGCGCTTTTTC TTG GCAAAAGCGCGCTTTTC-GCG TTTATTTGGGTATAG TERM 1465 1419689 - 1419663 - f 100 -15.2 -5.09225 | opp_overlap 1419663 1419654, overlap 1419684 1419685 ATTCCATGTAAAAAA GCGCGCTTTTTC TTG GCAAAAGCGCGC TTTTCGCGTTTATTT TERM 1466 1419663 - 1419689 + F 100 -15.2 -4.287 | opp_overlap 1419663 1419684 1419685, overlap 1419654 ATTCCATGTAAAAAA GCGCGCTTTTTC TTG GCAAAAGCGCGC TTTTCGCGTTTATTT BAD_1148 1419723 - 1420766 + | LacI-type transcriptional regulator TERM 1467 1420963 - 1420934 - f 100 -18.1 -3.91072 | GCAAATCCTTACAAA CGTTTGACGTCAA ACGA TTGACGTCAAACG ATTGACGAAGCAGTT lacY 1421023 - 1422444 + | galactoside permease cscA 1422647 - 1424203 + | beta-fructofuranosidase TERM 1468 1424256 - 1424304 + F 100 -19.8 -3.10057 | opp_overlap 1424253 1424252, overlap 1424258 1424266 GGCAGTAGCAAGGGG TATATGGGAAGGCCTCCGCATC GGAAG GGTGCGGAGGCCTTTCTATATC TGTCTCTCTATATCT TERM 1469 1424258 - 1424302 + F 100 -22.4 -3.10057 | opp_overlap 1424253 1424252, overlap 1424256 1424266 CAGTAGCAAGGGGTA TATGGGAAGGCCTCCGCATC GGAAG GGTGCGGAGGCCTTTCTATA TCTGTCTCTCTATAT TERM 1470 1424266 - 1424294 + F 100 -18.2 -4.20086 | opp_overlap 1424253 1424252, overlap 1424258 1424256 AGGGGTATATGGGAA GGCCTCCGCATC GGAAG GGTGCGGAGGCC TTTCTATATCTGTCT BAD_1151 1424530 - 1425333 + | ABC transporter permease BAD_1152 1425604 - 1426671 + | ABC transporter solute-binding protein BAD_1153 1426765 - 1428003 + | inosine-uridine preferring nucleoside hydrolase TERM 1471 1428026 - 1428053 + T 100 -17.2 -4.21438 | opp_overlap 1428026 1428032, overlap 1428032 TTTAGGAGCGGAAAA GAAAAAGACCCC CGCG GGGGTCTTTTTC TTATTTCTTCACGTC TERM 1472 1428053 - 1428026 - T 100 -17.2 -4.15565 | opp_overlap 1428026 1428032, overlap 1428032 TTTAGGAGCGGAAAA GAAAAAGACCCC CGCG GGGGTCTTTTTC TTATTTCTTCACGTC TERM 1473 1428047 - 1428032 - T 100 -10.4 -5.46706 | opp_overlap 1428032 1428026, overlap 1428026 AGCGGAAAAGAAAAA GACCCC CGCG GGGGTC TTTTTCTTATTTCTT TERM 1474 1428032 - 1428047 + T 100 -10.4 -5.44198 | opp_overlap 1428026 1428032, overlap 1428026 AGCGGAAAAGAAAAA GACCCC CGCG GGGGTC TTTTTCTTATTTCTT TERM 1475 1428138 - 1428160 + T 100 -17.8 -3.41878 | opp_overlap 1428144, overlap 1428142 CTCGGGCGTGAAGCT GGAACAGCCC ACC GGGCTGTTCC TTATCGCTTCACGCC TERM 1476 1428142 - 1428156 + T 77 -11.4 -3.47403 | opp_overlap 1428144, overlap 1428138 GGCGTGAAGCTGGAA CAGCCC ACC GGGCTG TTCCTTATCGCTTCA uppS 1428952 - 1428161 - | undecaprenyl pyrophosphate synthetase TERM 1477 1428433 - 1428473 + g 77 -15.3 -2.70932 | overlap 1428440 CACGCACCTCACGTG CGATGGCCGCGCAGGCGTC CGC GATTTCGGCGCGGCCACCG TAGTTCAGGCAGAAC recO 1429698 - 1428958 - | DNA repair protein RecO BAD_1156 1431533 - 1429782 - | hypothetical protein ispG 1432797 - 1431598 - | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase TERM 1478 1432503 - 1432518 + g 83 -4.6 -5.07107 | opp_overlap 1432506 AGTGGATGTCGGCAA TCACCG GAAT CGGCGA TTTTTTGACGATTTC ispC 1434040 - 1432862 - | 1-deoxy-D-xylulose 5-phosphate reductoisomerase TERM 1479 1434154 - 1434177 + r 91 -12.4 -4.21319 | opp_overlap 1434154 GTGTAAACGCGAGAA CAGGCTGACG ATTC CGCCAGCCTG TTTATTACCGTTGGT TERM 1480 1434177 - 1434154 - R 95 -14.6 -3.39668 | opp_overlap 1434154 GTGTAAACGCGAGAA CAGGCTGACG ATTC CGCCAGCCTG TTTATTACCGTTGGT BAD_1159 1435932 - 1434193 - | hypothetical protein TERM 1481 1434272 - 1434289 + g 84 -6.2 -4.93296 | opp_overlap 1434262 1434272, overlap 1434265 AAAATCGACCTGAAA GCCGGG CTTGGT TCCGGC TTTTTGTCCTCCTGC TERM 1482 1436192 - 1436218 + r 77 -7.8 -4.34402 | opp_overlap 1436192 CACGTAATAGCGAAA TCCCCCAAACCC AAT GGGCCCGGGGGA TTTTCGTATACGCGA TERM 1483 1436218 - 1436192 - R 100 -14.4 -3.77087 | opp_overlap 1436192 CACGTAATAGCGAAA TCCCCCAAACCC AAT GGGCCCGGGGGA TTTTCGTATACGCGA BAD_1160 1436672 - 1436256 - | hypothetical protein BAD_1161 1437687 - 1436791 - | hypothetical protein BAD_1162 1437759 - 1439318 + | hypothetical protein BAD_1163 1440800 - 1439301 - | DNA helicase II BAD_1164 1440914 - 1442485 + | hypothetical protein TERM 1484 1442790 - 1442844 + T 100 -19 -3.32765 | gap 1, opp_overlap 1442803, overlap 1442803 ACGCGTTGGACACGT TC-CATATGAAAAAGGCGTCGGACC ATATCA GGTTCGACGCCTTTTTCATATTCGA TTCATGTATCCGGTT TERM 1485 1442803 - 1442830 + T 100 -14.9 -4.88228 | opp_overlap 1442803, overlap 1442790 GTTCCATATGAAAAA GGCGTCGGACC ATATCA GGTTCGACGCC TTTTTCATATTCGAT TERM 1486 1442830 - 1442803 - T 100 -12.7 -4.8048 | opp_overlap 1442790 1442803 GTTCCATATGAAAAA GGCGTCGGACC ATATCA GGTTCGACGCC TTTTTCATATTCGAT BAD_1165 1443789 - 1442887 - | hypothetical protein TERM 1487 1443945 - 1443927 - H 71 -11.6 -2.98493 | overlap 1443924 CCGATGACGAAACGA GCGTCGGC ACA GCCGTCGC CATGGACGACGACTA BAD_1166 1443947 - 1444573 + | hypothetical protein TERM 1488 1444625 - 1444604 - T 91 -15.1 -3.14132 | opp_overlap 1444604 GCCTTTTGCGATGAA GGCCGACCC TGCG GGGCCGGCC TTTTGCCTATCCGCT TERM 1489 1444604 - 1444625 + T 100 -12.9 -4.23758 | opp_overlap 1444604 GCCTTTTGCGATGAA GGCCGACCC TGCG GGGCCGGCC TTTTGCCTATCCGCT dapF 1445561 - 1444662 - | diaminopimelate epimerase murI 1445647 - 1446423 + | glutamate racemase TERM 1490 1447303 - 1447336 + G 73 -10.1 -3.62046 | overlap 1447324 GGAACGCATGTACCG CGCCGGATATGCGGC GGCT GCCGCGATTCCAGCG TTCTTGGAAAGCTGA BAD_1169 1446521 - 1447351 + | hypothetical protein TERM 1491 1447474 - 1447427 - f 83 -14.4 -2.79915 | gap 1, opp_overlap 1447436 1447440, overlap 1447431 1447432 AGTGATCGCATGACA GCAATCGTACATACGACGATTAC ATG GCAGCCGTCGTATGTACG-TTAC GGCATCGCAACACGC TERM 1492 1447471 - 1447431 - f 95 -14.1 -3.29649 | opp_overlap 1447436 1447440, overlap 1447427 1447432 ATCGCATGACAGCAA TCGTACATACGACGATTAC ATG GCAGCCGTCGTATGTACGT TACGGCATCGCAACA TERM 1493 1447470 - 1447432 - f 90 -17.6 -2.57468 | opp_overlap 1447436 1447440, overlap 1447431 1447427 TCGCATGACAGCAAT CGTACATACGACGATTAC ATG GCAGCCGTCGTATGTACG TTACGGCATCGCAAC BAD_1170 1447450 - 1448733 + | aminotransferase BAD_1171 1448934 - 1449479 + | hypothetical protein dppA2 1449638 - 1451311 + | ABC-type transpoter TERM 1494 1451351 - 1451399 + T 100 -16.8 -4.10453 | opp_overlap 1451354 1451355, overlap 1451352 1451395 CCAATCGGCAACGAA AAATGAGTGGGGGTTCGAATCC TTAAT GGATTCGAACCCCCACTCGGCG TTTTACAGCCGTTTC TERM 1495 1451352 - 1451398 + T 100 -20.3 -3.0579 | opp_overlap 1451354 1451355, overlap 1451351 1451395 CAATCGGCAACGAAA AATGAGTGGGGGTTCGAATCC TTAAT GGATTCGAACCCCCACTCGGC GTTTTACAGCCGTTT TERM 1496 1451396 - 1451354 - T 100 -25.1 -4.86621 | opp_overlap 1451352 1451351 1451395, overlap 1451355 ATCGGCAACGAAAAA TGAGTGGGGGTTCGAATCC TTAAT GGATTCGAACCCCCACTCG GCGTTTTACAGCCGT TERM 1497 1451395 - 1451355 - T 100 -28.6 -3.5125 | opp_overlap 1451352 1451351, overlap 1451354 TCGGCAACGAAAAAT GAGTGGGGGTTCGAATCC TTAAT GGATTCGAACCCCCACTC GGCGTTTTACAGCCG BAD_1173 1452428 - 1451448 - | L-asparagineamidohydrolase TERM 1498 1452866 - 1452883 + H 90 -4.2 -5.35222 | AATAAATGGATATTC GTATAC TTATTC GTATAC TTTTTTATGCGTTTT BAD_1174 1452890 - 1453228 + | hypothetical protein topA 1453492 - 1453235 - | zinc finger domain-containing protein BAD_1176 1453911 - 1453495 - | hypothetical protein TERM 1499 1453591 - 1453578 - G 71 -8.1 -4.13945 | AGTGCCAGTCGAAAA TGGCG TTGA CGCCA TCATCGAGTTCAACC TERM 1500 1453908 - 1453863 - G 95 -7.5 -5.37043 | gap 1 ATGCCAGATAAAAAA CCGGGAA-CGGACGCGACGT TTGAATT ACGACGAACCCGACTCCCGG CATCGCGACTGCTTC TERM 1501 1454228 - 1454209 - H 76 -12.2 -3.09289 | opp_overlap 1454220 GACCATCTCAATACA CGTATCCC ATAT GGGATACG ACCGGTAGTGAAGGT TERM 1502 1454361 - 1454342 - H 78 -13.6 -2.56314 | AGAAATTTCAATCCA CGCATCCC GTAT GGGATGCG ACTTGCCACGATTAA TERM 1503 1454521 - 1454499 - g 71 -6.3 -4.34402 | gap 1, opp_overlap 1454499 1454501 CCGCCCAGACGAAAA CAGGCACCAG CCCG CCG-TGCCTG TATATTCCCGAGACG TERM 1504 1454578 - 1454548 - g 78 -7.5 -4.62783 | gap 1, overlap 1454552 1454553 GACGCAGCCCAAAAA CGAA-TCCGCCGGC TGCA ACCGGCGGCGCTCG GGAAGGAAAGGACGA TERM 1505 1454573 - 1454552 - g 71 -9.3 -3.81926 | overlap 1454548 1454553 CAGCCCAAAAACGAA TCCGCCGGC TGCA ACCGGCGGC GCTCGGGAAGGAAAG TERM 1506 1454572 - 1454553 - g 70 -12.8 -2.88433 | overlap 1454552 1454548 AGCCCAAAAACGAAT CCGCCGGC TGCA ACCGGCGG CGCTCGGGAAGGAAA BAD_1177 1454425 - 1455480 + | putative transposase BAD_1178 1455514 - 1455948 + | insertion element hypothetical protein TERM 1507 1456256 - 1456237 - T 78 -13.6 -2.54523 | overlap 1456254 CGATATTTCAATCCA CGCTCTCC GTAA GGAGAGCG ACCACCGCGCCATGC TERM 1508 1456459 - 1456440 - T 78 -13.6 -2.55074 | overlap 1456430 CCTAATTTCAATCCA CGCTCTCC GTAA GGAGAGCG ACATGGAAACCCCGC TERM 1509 1456660 - 1456641 - T 78 -13.6 -2.54193 | TATTATTTCAATCCA CGCTCTCC GTAA GGAGAGCG ACAATATCAGAGGCG TERM 1510 1456727 - 1456708 - T 78 -13.6 -2.54702 | opp_overlap 1456705 AGATATTTCAATCCA CGCTCTCC GTAA GGAGAGCG ACCTCTAGTGTCCTA TERM 1511 1456770 - 1456797 + T 74 -9.8 -3.62616 | opp_overlap 1456774 GACTTGTGATTTCAA TCCACGCTCTCC GTAA GGAGAGCGACGA TTCTCTATGGTGATA TERM 1512 1456793 - 1456774 - T 78 -13.6 -2.53876 | opp_overlap 1456770 TGTGATTTCAATCCA CGCTCTCC GTAA GGAGAGCG ACGATTCTCTATGGT TERM 1513 1456860 - 1456841 - T 78 -13.6 -2.55074 | opp_overlap 1456838 CTTAATTTCAATCCA CGCTCTCC GTAA GGAGAGCG ACATATCCTGCGTGA TERM 1514 1456928 - 1456909 - T 78 -13.6 -2.54523 | overlap 1456924 1456926 GCAGATTTCAATCCA CGCTCTCC GTAA GGAGAGCG ACTGCCCGTGACGCG TERM 1515 1456995 - 1456976 - T 78 -13.6 -2.54371 | AACCATTTCAATCCA CGCTCTCC GTAA GGAGAGCG ACGCCTGGGCGTGAT TERM 1516 1457063 - 1457044 - T 78 -13.6 -2.53876 | CGTGATTTCAATCCA CGCTCTCC GTAA GGAGAGCG ACGCGTGGAAGCAGC TERM 1517 1457130 - 1457111 - T 78 -13.6 -2.56046 | opp_overlap 1457108 GCAAATTTCAATCCA CGCTCTCC GTAA GGAGAGCG ACCGTATCCTCCCTG TERM 1518 1457264 - 1457245 - T 78 -13.6 -2.55074 | TGGAATTTCAATCCA CGCTCTCC GTAA GGAGAGCG ACCATTGAGAGCGTG TERM 1519 1457331 - 1457312 - T 78 -13.6 -2.54523 | opp_overlap 1457319 CGATATTTCAATCCA CGCTCTCC GCAA GGAGAGCG ACCTGGCGTCCATTG TERM 1520 1457398 - 1457379 - T 78 -13.6 -2.53995 | AGCGATTTCAATCCA CGCTCTCC GTAA GGAGAGCG ACTTCGGGTTCCGGG TERM 1521 1457464 - 1457445 - T 78 -13.6 -2.54523 | GCACATTTCAATCCA CGCTCTCC GTAA GGAGAGCG ACACGCGACTAAGAC TERM 1522 1457531 - 1457512 - T 78 -13.6 -2.55253 | overlap 1457527 1457529 AGGAATTTCAATCCA CGCTCTCC GTAA GGAGAGCG ACGTCATCGATCATC TERM 1523 1457598 - 1457579 - T 78 -13.6 -2.53995 | ACCGATTTCAATCCA CGCTCTCC GTAA GGAGAGCG ACCGGGTTCAGCTGC TERM 1524 1457664 - 1457645 - T 78 -13.6 -2.53876 | opp_overlap 1457642 CGCTATTTCAATCCA CGCTCTCC GTAA GGAGAGCG ACGTTTCGGGAAATG TERM 1525 1457734 - 1457715 - T 78 -13.6 -2.55253 | opp_overlap 1457712 AGCAATTTCAATCCA CGCTCTCC GTAA GGAGAGCG ACGCGTATTGCGGGC TERM 1526 1457802 - 1457783 - T 78 -13.6 -2.53876 | CGGCATTTCAATCCA CGCTCTCC GTAA GGAGAGCG ACGCAGAGTATTATG TERM 1527 1457869 - 1457850 - T 78 -13.6 -2.54523 | CGATATTTCAATCCA CGCTCTCC GTAA GGAGAGCG ACCCAGGCACAGGAC TERM 1528 1457936 - 1457917 - T 78 -13.6 -2.54193 | overlap 1457934 CATGATTTCAATCCA CGCTCTCC GTAA GGAGAGCG ACCAGGCCGCCGACC TERM 1529 1458002 - 1457983 - T 78 -13.6 -2.54523 | GCATATTTCAATCCA CGCTCTCC GTAA GGAGAGCG ACGCATGCCGACTGG TERM 1530 1458068 - 1458049 - T 78 -13.6 -2.53876 | TCTGATTTCAATCCA CGCTCTCC GTAA GGAGAGCG ACTTGACAACGACGG TERM 1531 1458136 - 1458117 - T 78 -13.6 -2.54523 | overlap 1458134 TGACATTTCAATCCA CGCTCTCC GTAA GGAGAGCG ACATACAGGCGCGGG TERM 1532 1458204 - 1458185 - T 78 -13.6 -2.55253 | opp_overlap 1458198 ACGAATTTCAATCCA CGCTCTCC GTAA GGAGAGCG ACCCCGCGTTCTATT TERM 1533 1458270 - 1458251 - T 78 -13.6 -2.54702 | AGAGATTTCAATCCA CGCTCTCC GTAA GGAGAGCG ACAAGAGTGTCTGAG TERM 1534 1458335 - 1458316 - T 78 -13.6 -2.55551 | CATAATTTCAATCCA CGCTCTCC GTAA GGAGAGCG ACTTCGCATGTGCTG TERM 1535 1458402 - 1458383 - T 78 -13.6 -2.54523 | opp_overlap 1458381 1458396, overlap 1458398 CCATATTTCAATCCA CGCTCTCC GTAA GGAGAGCG ACTCGCTTGATGCTT TERM 1536 1458469 - 1458450 - T 78 -13.6 -2.54523 | overlap 1458465 1458467 TGATATTTCAATCCA CGCTCTCC GTAA GGAGAGCG ACTGTCCGCCCCTGC TERM 1537 1458536 - 1458517 - T 78 -13.6 -2.55551 | TATAATTTCAATCCA CGCTCTCC GTAA GGAGAGCG ACGTGCAATGAGCGT TERM 1538 1458604 - 1458585 - T 78 -13.6 -2.55 | GAATATTTCAATCCA CGCTCTCC GTAA GGAGAGCG ACTAGCACGAACTGG TERM 1539 1458670 - 1458651 - T 78 -13.6 -2.56046 | GCAAATTTCAATCCA CGCTCTCC GTAA GGAGAGCG ACTCGAATATGAAGA TERM 1540 1458735 - 1458716 - T 78 -13.6 -2.54523 | overlap 1458733 CGACATTTCAATCCA CGCTCTCC GTAA GGAGAGCG ACCGGCAGACACCAC TERM 1541 1458757 - 1458733 - T 81 -13.5 -2.90075 | opp_overlap 1458754, overlap 1458716 CTCTCCGTAAGGAGA GCGACCGGCAG ACA CCACCGGCCGC CATGCGCTCCATTGG TERM 1542 1458804 - 1458785 - T 78 -13.6 -2.53876 | TGGCATTTTAATCCA CGCTCTCC GTAA GGAGAGCG ACCTGCTGCGCGAAC TERM 1543 1458870 - 1458851 - T 78 -13.6 -2.53876 | opp_overlap 1458850 1458849 CGTTATTTCAATCCA CGCTCTCC GTAA GGAGAGCG ACTTTGGAGCACGGC TERM 1544 1458937 - 1458918 - T 78 -13.6 -2.54193 | CATTATTTCAATCCA CGCTCTCC GTAA GGAGAGCG ACGCCACACCGAGCG TERM 1545 1459004 - 1458985 - T 78 -13.6 -2.53876 | opp_overlap 1458998 CCCTATTTCAATCCA CGCTCTCC GTAA GGAGAGCG ACGTGCGCCTCTTCT TERM 1546 1459073 - 1459054 - T 78 -13.6 -2.53995 | AGCCATTTCAATCCA CGCTCTCC GTAA GGAGAGCG ACCAACCAAGTGGCC TERM 1547 1459142 - 1459123 - T 78 -13.6 -2.56046 | opp_overlap 1459120, overlap 1459140 GCAAATTTCAATCCA CGCTCTCC GTAA GGAGAGCG ACCGTTCCTCGCGGG TERM 1548 1459210 - 1459191 - T 78 -13.6 -2.55074 | CGGAATTTCAATCCA CGCTCTCC GTAA GGAGAGCG ACCCTTCCACGATGC TERM 1549 1459277 - 1459258 - T 78 -13.6 -2.54702 | opp_overlap 1459254 AGACATTTCAATCCA CGCTCTCC GTAA GGAGAGCG ACTGGATGTCTGCAC TERM 1550 1459411 - 1459392 - T 78 -13.6 -2.54193 | GACGATTTCAATCCA CGCTCTCC GTAA GGAGAGCG ACAAATACGCAAAGT TERM 1551 1459478 - 1459459 - T 78 -13.6 -2.55551 | overlap 1459474 GAGAATTTCAATCCA CGCTCTCC GTAA GGAGAGCG ACCCGCTCCCCACGC TERM 1552 1459545 - 1459526 - T 78 -13.6 -2.53876 | overlap 1459543 GCTTATTTCAATCCA CGCTCTCC GTAA GGAGAGCG ACGGTGGCGCATGAG TERM 1553 1459612 - 1459593 - T 78 -13.6 -2.54702 | AGATATTTCAATCCA CGCTCTCC GTAA GGAGAGCG ACTCTGCCAGAAAGT TERM 1554 1459679 - 1459660 - T 78 -13.6 -2.53876 | GGCGATTTCAATCCA CGCTCTCC GTAA GGAGAGCG ACGCGGCGCTGGTGA TERM 1555 1459747 - 1459728 - T 78 -13.6 -2.53995 | ATGTATTTCAATCCA CGCTCTCC GTAA GGAGAGCG ACGCGGCGCTGGTGA TERM 1556 1459815 - 1459796 - T 78 -13.6 -2.53995 | overlap 1459811 ATGTATTTCAATCCA CGCTCTCC GTAA GGAGAGCG ACTCTCCCTCTACGC TERM 1557 1459882 - 1459863 - T 78 -13.6 -2.55074 | overlap 1459878 CCGAATTTCAATCCA CGCTCTCC GTAA GGAGAGCG ACGCGCATTCAAAAA TERM 1558 1459949 - 1459930 - T 78 -13.6 -2.54523 | TTAGATTTCAATCCA CGCTCTCC GTAA GGAGAGCG ACCACCTGGAAGTAA TERM 1559 1460015 - 1459996 - T 78 -13.6 -2.54193 | GATTATTTCAATCCA CGCTCTCC GTAA GGAGAGCG ACCAGGCGCGTGGCT TERM 1560 1460080 - 1460061 - T 78 -13.6 -2.54702 | AGACATTTCAATCCA CGCTCTCC GTAA GGAGAGCG ACCCAATAAACAGCG TERM 1561 1460147 - 1460128 - T 78 -13.6 -2.55074 | overlap 1460145 GGTAATTTCAATCCA CGCTCTCC GTAA GGAGAGCG ACCATCCGCCATGAT TERM 1562 1460213 - 1460194 - T 78 -13.6 -2.53876 | TCTCATTTCAATCCA CGCTCTCC GTAA GGAGAGCG ACCAACTTCCAGCAG TERM 1563 1460414 - 1460395 - T 78 -13.6 -2.54523 | overlap 1460410 GTAGATTTCAATCCA CGCTCTCC GTAA GGAGAGCG ACCGACGCTCCTGCG TERM 1564 1460481 - 1460462 - T 78 -13.6 -2.53876 | GGCTATTTCAATCCA CGCTCTCC GTAA GGAGAGCG ACCGCCACGTCCGAC TERM 1565 1460548 - 1460529 - T 78 -13.6 -2.53876 | overlap 1460546 CGCGATTTCAATCCA CGCTCTCC GTAA GGAGAGCG ACCATCGCCGCGCAG TERM 1566 1460615 - 1460596 - T 78 -13.6 -2.53995 | ACTCATTTCAATCCA CGCTCTCC GTAA GGAGAGCG ACCAACTACAGCCTC TERM 1567 1460682 - 1460663 - T 78 -13.6 -2.53876 | opp_overlap 1460660 CCTGATTTCAATCCA CGCTCTCC GTAA GGAGAGCG ACCTGGTATCACCAA TERM 1568 1460749 - 1460730 - T 78 -13.6 -2.53876 | overlap 1460747 CGGTATTTCAATCCA CGCTCTCC GTAA GGAGAGCG ACCGGCCTCGTACGC TERM 1569 1460817 - 1460798 - T 78 -13.6 -2.56046 | GCAAATTTCAATCCA CGCTCTCC GTAA GGAGAGCG ACCACACGCCACATT TERM 1570 1460884 - 1460865 - T 78 -13.6 -2.55551 | GAGAATTTCAATCCA CGCTCTCC GTAA GGAGAGCG ACCACGGACGGCTGG TERM 1571 1460951 - 1460932 - T 78 -13.6 -2.53995 | overlap 1460947 ACGGATTTCAATCCA CGCTCTCC GTAA GGAGAGCG ACCTCGCCGACCGGC TERM 1572 1461019 - 1461000 - T 78 -13.6 -2.55074 | opp_overlap 1461013 TCGAATTTCAATCCA CGCTCTCC GTAA GGAGAGCG ACCCTCTTCGGTCAG TERM 1573 1461086 - 1461067 - T 78 -13.6 -2.53995 | opp_overlap 1461064 AGGTATTTCAATCCA CGCTCTCC GTAA GGAGAGCG ACCTTGACTGGTTCG TERM 1574 1461155 - 1461136 - T 78 -13.6 -2.54523 | GTAGATTTCAATCCA CGCTCTCC GTAA GGAGAGCG ACCCAAAAGCGTCTG TERM 1575 1461222 - 1461203 - T 78 -13.6 -2.55551 | CATAATTTCAATCCA CGCTCTCC GTAA GGAGAGCG ACCCCACGGCTCAAC TERM 1576 1461290 - 1461271 - T 78 -13.6 -2.53876 | opp_overlap 1461267 TGGGATTTCAATCCA CGCTCTCC GTAA GGAGAGCG ACCATGTACTCCGCC TERM 1577 1461356 - 1461337 - T 78 -13.6 -2.53876 | CTCGATTTCAATCCA CGCTCTCC GTAA GGAGAGCG ACCGGACTGGCATGA TERM 1578 1461424 - 1461405 - T 78 -13.6 -2.55074 | opp_overlap 1461402 TGGAATTTCAATCCA CGCTCTCC GTAA GGAGAGCG ACCGTCGGTTGGTGC TERM 1579 1461491 - 1461472 - T 78 -13.6 -2.55074 | overlap 1461489 TGTAATTTCAATCCA CGCTCTCC GTAA GGAGAGCG ACCACCGCACAGCCA TERM 1580 1461559 - 1461540 - T 78 -13.6 -2.54371 | AAGCATTTCAATCCA CGCTCTCC GTAA GGAGAGCG ACCTATCGGATAACT TERM 1581 1461627 - 1461608 - T 78 -13.6 -2.54193 | TACCATTTCAATCCA CGCTCTCC GTAA GGAGAGCG ACCCTGTACGGTGCT TERM 1582 1461697 - 1461678 - T 78 -13.6 -2.53876 | TTTTATTTCAATCCA CGCTCTCC GTAA GGAGAGCG ACCTTCCAAATCATC TERM 1583 1461766 - 1461747 - T 78 -13.6 -2.54523 | opp_overlap 1461744 1461743, overlap 1461762 1461764 TGAGATTTCAATCCA CGCTCTCC GTAA GGAGAGCG ACCTGGACGCTCCCC TERM 1584 1461833 - 1461814 - T 78 -13.6 -2.54523 | TCATATTTCAATCCA CGCTCTCC GTAA GGAGAGCG ACCCGTGCAGCTGGA cas2 1462518 - 1462228 - | CRISPR-associated Cas2 family protein cas1 1463617 - 1462586 - | CRISPR-associated DNA polymerase cas4 1464294 - 1463617 - | hypothetical protein BAD_1182 1465174 - 1464329 - | CRISPR-associated Csh2 family protein TERM 1585 1464512 - 1464477 - G 70 -12.6 -2.90725 | opp_overlap 1464476, overlap 1464472 1464470 GCAAACCAGACGACA TCCAGCACTTCCATCG ATCC CGACGGACGTGCCGAA CTCTCATCATTCTCG BAD_1183 1466094 - 1465228 - | CRISPR-associated Csd1 family protein BAD_1184 1467130 - 1466099 - | CRISPR-associated Csd1 family protein BAD_1185 1467856 - 1467134 - | CRISPR-associated Cas5d family protein TERM 1586 1467467 - 1467484 + g 76 -6.3 -4.72007 | opp_overlap 1467438 TTGACGCACGGACCT CATCGCA ATGT TGTGATG TTTGTTTTCATCACG TERM 1587 1468115 - 1468070 - R 100 -7.5 -6.34424 | opp_overlap 1468071, overlap 1468071 1468073 1468074 CCCCCAAAAAAAAAA CTACGGCTCTCTCGCATACTC CTTG GAGCTTGCGAGAGAGCACTCA TCCTTCCTACATCAG TERM 1588 1468115 - 1468071 - R 93 -10.8 -4.39028 | gap 1, opp_overlap 1468071, overlap 1468070 1468073 1468074 CCCCAAAAAAAAAAC TACG-GCTCTCTCGCATACTC CTTG GAGCTTGCGAGAGAGCACTCA TCCTTCCTACATCAG TERM 1589 1468112 - 1468073 - R 82 -11.4 -3.77171 | opp_overlap 1468071, overlap 1468070 1468071 1468074 CCAAAAAAAAAACTA CGGCTCTCTCGCATACTC CTTG GAGCTTGCGAGAGAGCAC TCATCCTTCCTACAT TERM 1590 1468111 - 1468074 - R 83 -14.9 -2.83862 | opp_overlap 1468071, overlap 1468073 1468070 1468071 CAAAAAAAAAACTAC GGCTCTCTCGCATACTC CTTG GAGCTTGCGAGAGAGCA CTCATCCTTCCTACA cas3 1470539 - 1468122 - | putative CRISPR-associated helicase TERM 1591 1470756 - 1470698 - R 100 -15 -4.19177 | gap 3, opp_overlap 1470700 1470702, overlap 1470700 1470703 ACGCCCCAACACAAA TAGCAGTAGGGGGTGTGTTTCTCCTGCCA AACT CGACAGGAGAAACACACCCCC-AC-A-TA CTATCGTCAGTCAGC TERM 1592 1470757 - 1470700 - R 100 -22.4 -3.6944 | opp_overlap 1470700 1470702, overlap 1470698 1470703 GCCCCAACACAAATA GCA-GTAGGGGGTGTGTTTCTCCTGCCA AACT CGACAGGAGAAACACACCCCC-ACATAC TATCGTCAGTCAGCC TERM 1593 1470700 - 1470757 + r 91 -17.3 -2.80816 | opp_overlap 1470698 1470700 1470703, overlap 1470702 GCCCCAACACAAATA GCA-GTAGGGGGTGTGTTTCTCCTGCC AAACTC GACAGGAGAAACACACCCCC-ACATAC TATCGTCAGTCAGCC TERM 1594 1470702 - 1470754 + r 100 -20.1 -2.66964 | gap 1, opp_overlap 1470698 1470700 1470703, overlap 1470700 CCCAACACAAATAGC AGTAGGGGGTGTGTTTCTCCTGCC AAACTC GACAGGAGAAACACACCCCC-ACA TACTATCGTCAGTCA TERM 1595 1470753 - 1470703 - R 100 -26.5 -2.94681 | gap 1, opp_overlap 1470702 1470700, overlap 1470698 1470700 CCAACACAAATAGCA GTAGGGGGTGTGTTTCTCCTGCCA AACT CGACAGGAGAAACACACCCCC-AC ATACTATCGTCAGTC ileS 1474120 - 1470788 - | isoleucyl-tRNA synthetase TERM 1596 1474406 - 1474429 + r 86 -12.4 -3.78775 | opp_overlap 1474406 GTAGAAACGCGAAAA GCCGCACGGT GTCC ACCATGCGGC TTTCGTAATCGCAAA TERM 1597 1474429 - 1474406 - R 100 -14.6 -4.26189 | opp_overlap 1474406 GTAGAAACGCGAAAA GCCGCACGGT GTCC ACCATGCGGC TTTCGTAATCGCAAA lacS 1475982 - 1474510 - | galactoside symporter TERM 1598 1476187 - 1476231 + r 91 -10.1 -4.57569 | opp_overlap 1476189 1476194, overlap 1476194 CGCCGACAGTAGACA AACAAAAGGCGATTGATGACG CAG CATCATCAATCGCCTTTCATA TTTTTCCGCACATAC TERM 1599 1476229 - 1476189 - R 100 -19.3 -4.11404 | opp_overlap 1476187 1476194, overlap 1476194 CCGACAGTAGACAAA CAAAAGGCGATTGATGACG CAG CATCATCAATCGCCTTTCA TATTTTTCCGCACAT TERM 1600 1476194 - 1476224 + r 100 -17 -4.13748 | opp_overlap 1476194 1476189, overlap 1476187 AGTAGACAAACAAAA GGCGATTGATGACG CAG CATCATCAATCGCC TTTCATATTTTTCCG TERM 1601 1476224 - 1476194 - R 100 -19.2 -5.06016 | opp_overlap 1476187 1476194, overlap 1476189 AGTAGACAAACAAAA GGCGATTGATGACG CAG CATCATCAATCGCC TTTCATATTTTTCCG BAD_1189 1477331 - 1476252 - | LacI-type transcriptional regulator TERM 1602 1477541 - 1477509 - g 100 -12.8 -5.18726 | opp_overlap 1477540, overlap 1477528 1477539 1477540 CGTGCACAACAAAAA TCCTTTGCCCTGCA GAACA TGCGGAGCAAAGGA CTCGGCAACGCCGGT BAD_1190 1477495 - 1478718 + | hypothetical protein TERM 1603 1478969 - 1479018 + T 100 -36.7 -3.34344 | opp_overlap 1478995, overlap 1478970 CATGGGAGCCATATG CGCAAGGGCCGTGCGGAAGCCAC ATAT GTGGCTTCCGCACGGCCCTTGCA TTCGTTGAACACTAC TERM 1604 1478970 - 1479017 + T 100 -40.2 -2.60392 | opp_overlap 1478995, overlap 1478969 ATGGGAGCCATATGC GCAAGGGCCGTGCGGAAGCCAC ATAT GTGGCTTCCGCACGGCCCTTGC ATTCGTTGAACACTA BAD_1191 1481064 - 1479088 - | ABC transporter TERM 1605 1481185 - 1481199 + r 91 -7.8 -4.99134 | overlap 1481186 TTTCACTTCAGCCCC TCAGGC TGT GCCTGG TTTTTGGTTTGAGAT BAD_1192 1482992 - 1481172 - | ATP-binding protein of ABC transporter TERM 1606 1482920 - 1482939 + g 78 -2.1 -5.10933 | gap 1 GCAGCGATTTGCCAA GCGTGCGT ACGAG ATGC-CGC TTTTGTTTTGGCTGC TERM 1607 1482948 - 1482970 + g 70 -9.8 -3.42197 | overlap 1482949 ATGCCGCTTTTGTTT TGGCTGCGAT TGC ACCGCAGCCG TTGTCACGTTTGTTC BAD_1193 1483679 - 1482993 - | MarR-type transcriptional regulator TERM 1608 1483780 - 1483768 - R 70 -5.5 -4.47118 | overlap 1483770 AATAGCCAAAAATAA GCTCG GAA CAAGC CGAAACCAAGTATGA TERM 1609 1483847 - 1483800 - R 100 -15.6 -4.81685 | gap 1, opp_overlap 1483796, overlap 1483801 ACCAAGTATGAAAAA GCCGAGGATGTGGTCCGC-ACCG GTT CATTCGCGGGCCACATCCTCGGT CTAAATCCTTGAAAC TERM 1610 1483846 - 1483801 - R 100 -19.1 -3.47927 | gap 1, opp_overlap 1483796, overlap 1483800 CCAAGTATGAAAAAG CCGAGGATGTGGTCCGC-ACCG GTT CATTCGCGGGCCACATCCTCGG TCTAAATCCTTGAAA BAD_1194 1486153 - 1483898 - | putative beta-glucosidase TERM 1611 1485138 - 1485153 + g 84 -10.4 -4.24002 | GGAGTGCGGGCGAAT TCGCCG ATGA CGGCGA TTTTCGCGTTTGCAG TERM 1612 1486380 - 1486343 - H 85 -11.4 -4.053 | opp_overlap 1486343, overlap 1486376 ACCACTTGAGAGAAA TGGCGATTCATAAGCA TTGCAG CGCACATGAATCGCCA TTCATGGAAGGCAGG BAD_1195 1486370 - 1486987 + | TetR-type transcriptional regulator TERM 1613 1487714 - 1487671 - g 72 -14 -2.61548 | gap 1, overlap 1487668 1487667 CCGGACCAGAAGGTA CTGCGCATGTGTTCGCTCC GCAAAAA GGCGCGAACACA-GCACAG GTCGAACTCCTCGAT glxK 1487043 - 1488245 + | glycerate kinase bglX 1491000 - 1488571 - | beta-D-glucosideglucohydrolase TERM 1614 1489176 - 1489160 - G 70 -12.3 -2.85999 | opp_overlap 1489156 1489156 GGAGCCCACAGCAGA GCCGAAG TGC CTTCGGC TGGAGTTTCGTCAAC TERM 1615 1491043 - 1491019 - R 100 -13.5 -4.27316 | opp_overlap 1491019 CCCGTCAACGCAAAA GGCGAGGGACC ATC AGACCCTCGCC TTTTCGCACGCGCAT TERM 1616 1491019 - 1491043 + r 95 -12.8 -4.07687 | opp_overlap 1491019 CCCGTCAACGCAAAA GGCGAGGGAC CATCA GACCCTCGCC TTTTCGCACGCGCAT BAD_1198 1491390 - 1491088 - | TetR-type transcriptional regulator BAD_1199 1491507 - 1492745 + | hypothetical protein TERM 1617 1493486 - 1493474 - g 77 -3.3 -4.99043 | TTTCGAGAAACAAAA CACCG GTT CCGTG ATGTTGGATGAGAAC BAD_1200 1492785 - 1493972 + | hypothetical protein TERM 1618 1494272 - 1494247 - T 78 -6.7 -4.57218 | overlap 1494248 AGAAGATAAGCAAAA TGAGGGTGGCC GTCA GGTCACCCCCG AACGTATGCGGAACA TERM 1619 1494271 - 1494248 - T 73 -10.2 -3.32704 | overlap 1494247 GAAGATAAGCAAAAT GAGGGTGGCC GTCA GGTCACCCCC GAACGTATGCGGAAC BAD_1201 1494932 - 1494297 - | TetR-type transcriptional regulator BAD_1202 1496179 - 1494980 - | beta-1,3-exoglucanase TERM 1620 1495065 - 1495087 + g 71 -9 -3.75332 | GCCTCAAGATTGCCG CCGTTGCGAG GAT CCCGCGGCGG TTTCCCTTCGCCACT TERM 1621 1496264 - 1496306 + r 85 -12.7 -3.48276 | opp_overlap 1496250 1496254 1496251 ACCCATTCGGCCCAA TGGGCCAAGGAACCGCGCG TCATT CGCAACGTTCCTTGGTCCA TTGTATGCGCCCCGC xynB 1498048 - 1496402 - | xylan beta-1,4-xylosidase BAD_1204 1499319 - 1498111 - | beta-1,3-exoglucanase TERM 1622 1498618 - 1498635 + g 82 -11.3 -3.91897 | opp_overlap 1498616 1498617 1498632 TTCGATGTCGAAACC GTCGTGG AACA CCACGAC TTTGTCGGTCGGCAA TERM 1623 1499565 - 1499539 - R 100 -13.9 -5.59534 | AATCATAAGAAAAAA GCCTCTTTCTT GCGGG AAGAAAGAGGC AACCTGCAGCCGGAG xsa 1501150 - 1499594 - | alpha-L-arabinosidase BAD_1206 1502563 - 1501307 - | membrane protein with transport function TERM 1624 1502450 - 1502424 - G 73 -10.8 -3.70149 | GCGATATCAGCCAAA CGCTGCGGCAGC AGC ACTGCAGCAACG ATCCGCAACGCCAGC BAD_1207 1502796 - 1503530 + | TetR-type transcriptional regulator TERM 1625 1503616 - 1503570 - T 100 -26 -4.81249 | overlap 1503556 1503553 1503551 CCGCAAACGCAAAAA GGCGTTTGCCTGCGGCGACCGG TAA CCGATCACCATAGGCAAACGCC CCGCAACACAACACC BAD_1208 1505090 - 1503747 - | glucosylceramidase TERM 1626 1505271 - 1505256 - R 71 -4.6 -4.67904 | overlap 1505257 CAGTAAGTGCAAAAA CCGCAG GATG CCGCGA TAATCTATTCACAAC TERM 1627 1505423 - 1505474 + r 73 -10.3 -3.38727 | gap 2, overlap 1505424 1505465 1505473 GGAAAAACTTCCTAT TCCC-TCT-CTCCCTCTCCTCTC TCGAAATT GAGGGGAGGGGGAGGAGGTGGGG TTACTTGACCTTCTT BAD_1209 1506800 - 1505475 - | membrane protein with transport function BAD_1210 1507156 - 1507782 + | TetR-type transcriptional regulator bga 1509882 - 1507816 - | beta-galactosidase I BAD_1212 1510734 - 1510105 - | TetR-type transcriptional regulator BAD_1213 1512069 - 1510771 - | glutamate--cysteine ligase TERM 1628 1511768 - 1511791 + g 75 -8.1 -4.14472 | ACGGAGATGCCGTCA CGGGCGAGT CCGACC AGTCGCCCG TTTTCCCAGTATTCC TERM 1629 1512252 - 1512209 - R 100 -28.4 -2.87132 | overlap 1512185 TTGGCGGCTCAGATA CCGTCGAACCGACGTCGGAA AGTT TCCCAACGTCGGTTCGACGG AAATAAGAATGGCGA yxcA 1517038 - 1512269 - | hypothetical protein nrdG 1517939 - 1517226 - | anaerobic ribonucleoside-triphosphate reductase activating protein nrdD 1520390 - 1517985 - | anaerobic ribonucleoside triphosphate reductase TERM 1630 1520152 - 1520169 + g 74 -11.3 -3.52204 | overlap 1520147 TCCTCGATCTTCGCC GGACCGT TGTA ACGGTCC TTGATTTCGGCCTCG TERM 1631 1520404 - 1520427 + H 93 -13.8 -3.85704 | ATGTATATTTCCTTT CCGGGCCGGA CCCA TCCGGCCAGG TTTCATGCTTCGTCC TERM 1632 1520539 - 1520554 + H 100 -9 -5.20154 | TATATATTCTACTTT TGGCGA GATT TCGCCA TTTTTTGCCTTGTGT TERM 1633 1520974 - 1520987 + G 73 -9.5 -3.85698 | overlap 1520980 TCGGACGGTTCGCCG CGGCG GCGG CGCCG TTTGTGCAGGGCGAC xseA 1520703 - 1521983 + | exodeoxyribonuclease VII large subunit BAD_1218 1522641 - 1522931 + | hypothetical protein BAD_1219 1524088 - 1522940 - | hypothetical protein TERM 1634 1523983 - 1524001 + g 79 -8 -4.54727 | TGCGTAGCGGCTTGA CCGGTCTC GTT GCGGCCGG TTTTGCTTTAGCCCG TERM 1635 1524047 - 1524072 + g 70 -3.2 -4.65895 | gap 1, overlap 1524050 1524051 CGCTTGCGATTTGCC CGTTGCCGGCC CTTGC GGCTGGC-GTG TTTTTGCCTGAGCCA BAD_1220 1524433 - 1524197 - | membrane-fusion protein BAD_1221 1525023 - 1524433 - | hypothetical protein TERM 1636 1524970 - 1524996 + g 82 -12.2 -3.67976 | overlap 1524948 1524960 GGTGGCCAACGCCAT GGCGGTGGTGGT TTT GCCGCTGCCGCC TTTGAGGTTGATGAC TERM 1637 1525205 - 1525179 - H 95 -8.1 -4.86621 | gap 2 ACGGGTAACGAAAAA TCCCGAG--GAGC TCA GCTCAACTCGGGA TTCGAAAAGAGTAAA TERM 1638 1525496 - 1525480 - H 72 -12.3 -2.6175 | opp_overlap 1525479, overlap 1525479 1525490 TACAGTCGAAGCAAT GCCGCAA CAA TTGCGGC GTGCTTACGAAAGAA BAD_1222 1525520 - 1526248 + | hypothetical protein TERM 1639 1526325 - 1526267 - T 84 -13.3 -3.15788 | gap 1 CGCCATAATACAAAG CTCGGCTGTAATCGTTGTGATTGCATGC GATT ACA-GCAACCGCAACGCCTATAGCCGAG CCGTAAGCGAGGTTT BAD_1223 1527363 - 1526392 - | hypothetical protein TERM 1640 1527171 - 1527189 + g 83 -2.4 -5.1861 | gap 1, overlap 1527152 TTTCAACCGCGCTGA GCAAGGC TTCGAT GCCT-GC TTTTTTGATGCTGCC TERM 1641 1527460 - 1527429 - R 81 -12.3 -3.56099 | overlap 1527431 1527450 GATAACCTTTGCAAA TATGCCCACCCTC GGAAAG GAGGGTGGGCACC CAATAATCACAGTGC TERM 1642 1527458 - 1527431 - R 100 -17.1 -3.35522 | overlap 1527429 1527450 TAACCTTTGCAAATA TGCCCACCCTC GGAAAG GAGGGTGGGCA CCCAATAATCACAGT BAD_1224 1528754 - 1527549 - | aspartate aminotransferase vsr 1529332 - 1528799 - | XorII very-short-patch-repair endonuclease TERM 1643 1529241 - 1529253 + g 75 -2.6 -4.94992 | CCCCGCTCGTATTTT TCGG GTTTG CCGG TTTTTCTAGGTTTGC BAD_1226 1529454 - 1530458 + | oxidoreductase TERM 1644 1530471 - 1530502 + F 72 -11.7 -2.73542 | gap 1, overlap 1530474 TAGCGATGCGATCGA TGACGTGGGCGTGA CGCGC TC-CGCCCACGTTA TAATTGCCCCTTGCG TERM 1645 1530474 - 1530499 + F 77 -11.2 -3.51597 | gap 1, overlap 1530471 CGATGCGATCGATGA CGTGGGCGTGA CGCGC TC-CGCCCACG TTATAATTGCCCCTT BAD_1227 1530475 - 1532547 + | putative helicase IV BAD_1228 1532850 - 1533620 + | restriction endonuclease TERM 1646 1534290 - 1534275 - g 72 -2.6 -4.75472 | gap 1, opp_overlap 1534276, overlap 1534276 TCGATATCAAGAAAA GCAAGGA TGG TCCTT-C TTGCATTGCAGGAGA TERM 1647 1534828 - 1534807 - g 71 -5.8 -4.29493 | opp_overlap 1534824 CATCAAAGATATAAA GCAGCTGC AAAACA GAAGCTGC GATAGCATTATTCTG TERM 1648 1535339 - 1535327 - g 70 -3.3 -4.62302 | GAAGACGTTGAAAAA CTCAG AAA CGGAG TGACTCTTCGATACA BAD_1229 1533674 - 1535605 + | putative type II restriction enzyme Sau3AI TERM 1649 1535650 - 1535606 - T 100 -16.5 -3.52909 | opp_overlap 1535615, overlap 1535598 AAAGACAGACTATAA GCGTTTGACGGACACTGCCCT TGC ATGGCAAAGTCCGCCAAACAC CCGTTCCTACCGAGA BAD_1230 1538372 - 1535700 - | helicase TERM 1650 1537058 - 1537068 + g 71 -6.8 -4.20354 | GCAGCTTTTTCTTAG GACC AAA GGTC TTTTGAAATTCGCTT BAD_1231 1539643 - 1538369 - | hypothetical protein TERM 1651 1539150 - 1539174 + g 95 -2.9 -5.60993 | opp_overlap 1539153 1539158, overlap 1539159 TCTTTTCCCATCTGC AAATCAAGC TCAAGCT GCTTGATTG TTTTTTTATCAACAG TERM 1652 1539159 - 1539171 + g 84 -6.3 -4.89054 | opp_overlap 1539153 1539158, overlap 1539150 ATCTGCAAATCAAGC TCAAG CTG CTTGA TTGTTTTTTTATCAA BAD_1232 1541278 - 1539818 - | type II restriction enzyme Sau3AI BAD_1233 1541473 - 1542747 + | modification methylase Sau3AI BAD_1234 1543708 - 1543406 - | hypothetical protein TERM 1653 1543976 - 1543925 - R 100 -16.2 -3.84996 | gap 1, opp_overlap 1543931, overlap 1543920 1543931 AACAGACAACCCAAA CGAC-AAGGTGGTTTGCACATATAT CGA ACCTATGCGCAAACCACCTTCATCG ACTCATTTCGCGCCG TERM 1654 1543931 - 1543969 + r 78 -11.9 -3.17956 | opp_overlap 1543920 1543931 1543925 CAACCCAAACGACAA GGTGGTTTGCACATA TATCGAACC TATGCGCAAACCACC TTCATCGACTCATTT TERM 1655 1543969 - 1543931 - R 100 -16.2 -3.6268 | opp_overlap 1543931, overlap 1543920 1543925 CAACCCAAACGACAA GGTGGTTTGCACATATAT CGA ACCTATGCGCAAACCACC TTCATCGACTCATTT orf137 1544448 - 1543999 - | transmembrane protein BAD_1236 1545732 - 1544767 - | hypothetical protein BAD_1237 1546260 - 1545820 - | hypothetical protein TERM 1656 1546280 - 1546251 - G 74 -12.1 -3.27109 | gap 1, opp_overlap 1546250 1546249 1546245, overlap 1546249 TCAAGCCAAGGAATA GGCGGCGCACG-GC TCA GCACATCCGCCGCC AGTTTCTCATCTATC BAD_1238 1549515 - 1546291 - | alpha-mannosidase TERM 1657 1547179 - 1547196 + g 70 -4.7 -4.55287 | overlap 1547181 1547183 GGTGCTGGACACGTG CACGGTG GCTC CGCCGCG TTTTGTCTCCGTCAC TERM 1658 1549732 - 1549696 - H 100 -10.7 -5.52986 | overlap 1549698 AGGTGATGAAAAAAA TGGGGGTTCCCGGAGCG ACG CCCGCCGGGAAGCCCGA AAAGAGAGGATAAAA TERM 1659 1549730 - 1549698 - H 81 -13.3 -2.93701 | overlap 1549696 GTGATGAAAAAAATG GGGGTTCCCGGAGCG ACG CCCGCCGGGAAGCCC GAAAAGAGAGGATAA TERM 1660 1549749 - 1549789 + H 81 -14 -2.64155 | gap 2, opp_overlap 1549750 1549751, overlap 1549746 1549745 AAGAGAGGATAAAAA AGGGGCCTCCCGG--GAGCC AAA GGCTCGACCGGGAGGCCCGA TACGTTTGAAGCGGC TERM 1661 1549788 - 1549750 - H 100 -17.5 -5.35459 | gap 2, opp_overlap 1549749 1549746 1549745, overlap 1549751 AGAGAGGATAAAAAA GGGGCCTCCCGG--GAGCC AAA GGCTCGACCGGGAGGCCCG ATACGTTTGAAGCGG TERM 1662 1549787 - 1549751 - H 100 -21 -3.79649 | gap 2, opp_overlap 1549749 1549746 1549745, overlap 1549750 GAGAGGATAAAAAAG GGGCCTCCCGG--GAGCC AAA GGCTCGACCGGGAGGCCC GATACGTTTGAAGCG TERM 1663 1555245 - 1555209 - H 76 -3.2 -5.093 | gap 2, overlap 1555210 1555213 1555233 CTCAAAATAAGAAAA TTG-ACGAT-CGCCTT ATAAGGA AAGGCGCATCGCACAA AAACCTCGCCGCCGT TERM 1664 1555931 - 1555945 + G 74 -6.4 -4.35524 | opp_overlap 1555924, overlap 1555924 GCCAGATATCCAAAG CGTTGC ATT GCAATG TTTTAGATTTACACC BAD_1239 1555714 - 1556190 + | putative transcriptional regulator cutE-1 1556664 - 1556269 - | apolipoprotein N-acyltransferase TERM 1665 1556914 - 1556904 - g 70 -3.2 -4.61633 | AGATATGCCCAAAAA GGAA GTC TCCC GCTTCGATGCTGATA rep 1556857 - 1557993 + | replicase TERM 1666 1558200 - 1558160 - T 100 -16 -3.32819 | opp_overlap 1558160, overlap 1558168 1558190 GACATATCTGCATAA CTATATAATAGTTATATA AGATA TATATAACTATTATATAG TTTTTTGGACTGTAG TERM 1667 1558160 - 1558200 + T 100 -16 -5.07567 | opp_overlap 1558160 1558168 1558190 GACATATCTGCATAA CTATATAATAGTTATATA AGATA TATATAACTATTATATAG TTTTTTGGACTGTAG TERM 1668 1558531 - 1558579 + T 100 -18.7 -3.46511 | overlap 1558533 1558543 AAGTGATGTTGTATG GAGGTTATATGTTTCTTATATAG AAT TTATATAAGAAACATATAACCTA TTATCGATTATCTGA TERM 1669 1558533 - 1558577 + T 100 -21.3 -3.29959 | overlap 1558531 1558543 GTGATGTTGTATGGA GGTTATATGTTTCTTATATAG AAT TTATATAAGAAACATATAACC TATTATCGATTATCT BAD_1242 1559764 - 1558580 - | hypothetical protein BAD_1243 1560942 - 1559761 - | hypothetical protein BAD_1244 1562710 - 1560944 - | hypothetical protein TERM 1670 1561921 - 1561945 + g 82 -12.9 -3.63805 | CCGGCTGTCCGGAGG CGTATCGCCAA CAG TCGGCGATACG TTTCGCGTCTGCGAT BAD_1245 1563209 - 1562823 - | hypothetical protein BAD_1246 1564309 - 1563206 - | hypothetical protein TERM 1671 1563976 - 1564000 + g 86 -13.5 -3.54424 | CGATGCCCTGGCCAA GCTCGCGCACG TAC CGTGCGAGGGC TTTCGCGCCGTCCGG cheA 1564906 - 1564397 - | two-component sensor histidine kinase involved in chemotaxis BAD_1248 1566815 - 1565316 - | hypothetical protein BAD_1249 1568359 - 1566872 - | hypothetical protein BAD_1250 1570483 - 1568360 - | hypothetical protein BAD_1251 1570742 - 1571512 + | hypothetical protein BAD_1252 1571579 - 1572124 + | hypothetical protein TERM 1672 1573033 - 1573002 - T 74 -10.9 -3.51924 | opp_overlap 1572994 GTTCGATGGACATAA GACGTGCCGGG ACCAGGCCTG CCCGGCACATC AGATGCCCTATGCTT BAD_1253 1574881 - 1573493 - | hypothetical protein TERM 1673 1574080 - 1574099 + g 77 -11.4 -3.59979 | TCTCCTCGATGATGC GCTTCCCG CCTG CGGGGAGC TTTCCCGTAGGGAGA TERM 1674 1575464 - 1575478 + G 90 -5.6 -5.1971 | TTTTGCGTTTCCGAT GGGATG GGA CTTCCC TTTTTAATTTTTAGT BAD_1254 1575190 - 1575492 + | hypothetical protein TERM 1675 1575813 - 1575797 - T 70 -2.9 -4.72201 | overlap 1575798 TGTCACAAAAAACAA CGTATCG TTT CGCTACA AGAAGTACAAATTGG cysD-2 1577377 - 1576070 - | sulfate adenylyltransferase, subunit 2 BAD_1256 1577793 - 1578710 + | putative ABC-type amino acid transport system periplasmic component BAD_1257 1578884 - 1579408 + | hypothetical protein BAD_1258 1579424 - 1580134 + | hypothetical protein BAD_1259 1580188 - 1580685 + | hypothetical protein TERM 1676 1581300 - 1581283 - g 79 -8.3 -4.46926 | overlap 1581285 GATGTCATCACAAAA GTCGCCG GCAC CGGCGTC ACGATGATCCTTGTG yckI 1580701 - 1581468 + | glutamine ABC transporter ATP-binding protein BAD_1261 1581971 - 1581537 - | NAD/NADP octopine/nopaline dehydrogenase TERM 1677 1581741 - 1581722 - GT 70 -9.2 -3.6215 | overlap 1581715 TGAACCGATGCGAAA CGTTCGCG GGGC CGCGGACG TGCGAATACAATGAA BAD_1262 1582606 - 1581881 - | hypothetical protein TERM 1678 1582953 - 1582969 + r 73 -8.7 -3.87075 | opp_overlap 1582945, overlap 1582942 TAATTCACGGACTTC GTCAGTG GTT CGCTGAC TTTCTCCACGCTCGT TERM 1679 1583022 - 1583034 + r 74 -3.4 -4.88407 | opp_overlap 1583019 1583020, overlap 1583020 TCATCTGAAATAGCC GTCT TCGAC AGAC TTTTTGCTTCAGTGC BAD_1263 1584520 - 1583246 - | TraG-related protein BAD_1264 1585071 - 1585982 + | hypothetical protein TERM 1680 1586134 - 1586156 + T 100 -12.6 -4.3467 | CGCCTGTCGTCTTCC GGCCGCACCT ACT GGGCGCGGCC TTTTCGTATCCGGAT BAD_1265 1586576 - 1586394 - | hypothetical protein BAD_1266 1587137 - 1586799 - | hypothetical protein TERM 1681 1587041 - 1587004 - G 91 -13.3 -3.92542 | opp_overlap 1587005, overlap 1587010 GGTATGGCCAAAGAA TGCAAAGGGCCGGTGTC CGAA GACACCGGCCCGACGCT TTGCCAGGGGATGGG TERM 1682 1587005 - 1587040 + g 90 -14.6 -3.53444 | opp_overlap 1587004 1587010 GTATGGCCAAAGAAT GCAAAGGGCCGGTGTC CGAA GACACCGGCCCGACGC TTTGCCAGGGGATGG TERM 1683 1587035 - 1587010 - G 100 -20.5 -3.89435 | opp_overlap 1587005, overlap 1587004 GCCAAAGAATGCAAA GGGCCGGTGTC CGAA GACACCGGCCC GACGCTTTGCCAGGG BAD_1267 1587427 - 1587161 - | DNA-binding response regulator TERM 1684 1587241 - 1587262 + g 90 -14.4 -3.53012 | CAGCCGGTCGACGTT GCCGCGCC TGACGC GGCGCGGC TTTACCGGAAAGGCG TERM 1685 1587448 - 1587477 + r 100 -23.7 -4.72029 | CGGCTAGCGGTCCCG GTCTGCGGCGTGG TCTC CCACGCCGCAGAC TTTTCTTCGGTTGCC BAD_1268 1588211 - 1587588 - | DNA-binding response regulator TERM 1686 1588089 - 1588124 + g 76 -5.6 -4.64598 | gap 1, opp_overlap 1588093, overlap 1588093 ATGTCCGCTCCTTTT CA-AAGTGTTAACTCTA TTA TAGAGTATACACTTATG TTTTTCAAATCCTTC TERM 1687 1588401 - 1588372 - g 72 -2.1 -4.83759 | gap 1, overlap 1588378 AAGGAAAGGGAAAAA CGAAATGGG-ATAC AAG GCATTCCCCTATCG CATCATGGCGTGGAT BAD_1269 1588337 - 1588840 + | hypothetical protein BAD_1270 1589047 - 1589484 + | hypothetical protein TERM 1688 1589502 - 1589520 + G 70 -3.2 -4.64157 | TAATGAACTGGAATC TTCACT CTCGTCC AGTGAA TTTTCTCGTTGTTTA TERM 1689 1589547 - 1589582 + G 95 -11.3 -4.54477 | TTTATTTTGTATCCG GCCGGTAGGGATT TTCATAACCC AATCTCTACCGGC TTTTCTGCATTTTGA speE 1589494 - 1589784 + | spermidine synthase (putrescine aminopropyltransferase) TERM 1690 1590897 - 1590857 - g 71 -6.7 -4.24294 | overlap 1590861 1590864 AGCAAGCATGGAAAA CAGACCACCGTTCCTTTCC GAT GGCATGGAACGGCAGATTG CGAATTTATCCACGT TERM 1691 1590893 - 1590861 - g 70 -10.5 -3.43007 | overlap 1590857 1590864 AGCATGGAAAACAGA CCACCGTTCCTTTCC GAT GGCATGGAACGGCAG ATTGCGAATTTATCC BAD_1272 1589796 - 1591151 + | hypothetical protein BAD_1273 1591841 - 1592440 + | hypothetical protein ptsG 1592437 - 1592673 + | PTS system glucose-specific IIABC component TERM 1692 1592744 - 1592698 - T 85 -12.6 -3.49653 | opp_overlap 1592689 1592691 1592702, overlap 1592701 1592708 ATGATTTTTATATAA GTATTATATAGGTCCTATATGA ATT TCATATAGGACCTATATATTTT AGCTCTTTTATGCGA TERM 1693 1592741 - 1592701 - T 100 -18.7 -2.89 | opp_overlap 1592689 1592691 1592702, overlap 1592698 1592708 ATTTTTATATAAGTA TTATATAGGTCCTATATGA ATT TCATATAGGACCTATATAT TTTAGCTCTTTTATG TERM 1694 1592702 - 1592740 + T 100 -22.2 -4.36485 | opp_overlap 1592701 1592698 1592708, overlap 1592689 1592691 TTTTTATATAAGTAT TATATAGGTCCTATATGA ATT TCATATAGGACCTATATA TTTTAGCTCTTTTAT TERM 1695 1592734 - 1592708 - T 93 -16.8 -2.98729 | opp_overlap 1592689 1592702 1592691, overlap 1592701 1592698 TATAAGTATTATATA GGTCCTATATGA ATT TCATATAGGACC TATATATTTTAGCTC BAD_1275 1593067 - 1592777 - | hypothetical protein BAD_1276 1593668 - 1594378 + | hypothetical protein TERM 1696 1594437 - 1594379 - f 85 -15.6 -2.6563 | opp_overlap 1594386, overlap 1594414 GTCGCTAAGAAGTGA TTCCATACGCCGTTTCGCGGTCG-ACGC ATAGG ACATTCGACCGCGAAACGGCGTATA-AT CCTGTTGCTTGAACG TERM 1697 1594386 - 1594431 + F 100 -22.1 -2.867 | opp_overlap 1594379 1594414 AGAAGTGATTCCATA CGCCGTTTCGCGGTCGA CGCATAGGACAT TCGACCGCGAAACGGCG TATAATCCTGTTGCT TERM 1698 1594863 - 1594844 - g 85 -9.2 -4.62069 | overlap 1594846 TCTGCAGCGGAAAAA GAGGCTCG CCGA CGAGCCGC ACGGAGTCTTGACCG TERM 1699 1594861 - 1594846 - g 78 -10.4 -3.92746 | overlap 1594844 TGCAGCGGAAAAAGA GGCTCG CCGA CGAGCC GCACGGAGTCTTGAC BAD_1277 1594742 - 1595275 + | cobalt ABC transporter ATP-binding protein fhaB 1595347 - 1596636 + | filamentous haemagglutinin tnp 1598057 - 1596702 - | IS3 family transposase TERM 1700 1597561 - 1597589 + g 85 -3.1 -5.41143 | gap 2, overlap 1597561 1597562 1597563 GTCTTCTCCCTGTTC GA--CAGGCGCCG CAGGT CGGCGCCGGGGTC TTTTTTTACGACCTC BAD_1280 1598193 - 1598696 + | type II restriction-modification systemrestriction subunit TERM 1701 1598772 - 1598807 + G 73 -9.1 -3.89336 | opp_overlap 1598744 1598771 1598770, overlap 1598766 1598797 ACAGAGTCCGAAAGG TCCAACCTTCCTTAG TTTCCT CTAAGGAAAGGTGGA TTTCCATTTCCTTCG BAD_1281 1598693 - 1600111 + | type II restriction-modification systemrestriction subunit kpn2kIR 1600108 - 1601010 + | restriction endonuclease RKpn2kI TERM 1702 1601006 - 1601064 + T 80 -12 -3.40371 | gap 3, opp_overlap 1601030, overlap 1601008 GCTTGGCCGAGTGCC T-AT-AGTCATTGGCGGGGGGATAACGGG ATAT TCCGTTATCCCCCCGCCAA-GCCGCATCA TTCCTTGCTAGCATC TERM 1703 1601008 - 1601061 + T 93 -16.2 -2.85896 | opp_overlap 1601030, overlap 1601006 TTGGCCGAGTGCCTA T-AGTCATTGGCGGGGGGATAACGGG ATAT TCCGTTATCCCCCCGCCAA-GCCGCA TCATTCCTTGCTAGC kpn2kIM 1602213 - 1601062 - | DNA-methyltransferase MKpn2kI invA 1602932 - 1602318 - | DNA invertase-like protein BAD_1285 1603384 - 1604364 + | hypothetical protein TERM 1704 1604434 - 1604459 + F 76 -10.4 -3.66018 | GAGGGTGGGAAGCGG CACGCTCGCC GAAATA GGCGACCGTG TTCTTCGAATCGTCA BAD_1286 1604706 - 1604993 + | protein kinase TERM 1705 1605127 - 1605162 + T 100 -20.6 -2.80816 | opp_overlap 1605127 1605128 1605132, overlap 1605132 ATCCGCCAAATCAAA CGAAAGGGCGCACGTT TCAA AACGTGCGCCCTTTCA TGTAATGGATGGAGA TERM 1706 1605162 - 1605127 - T 100 -22.8 -4.06055 | opp_overlap 1605127 1605132, overlap 1605128 1605132 ATCCGCCAAATCAAA CGAAAGGGCGCACGTT TCAA AACGTGCGCCCTTTCA TGTAATGGATGGAGA TERM 1707 1605161 - 1605128 - T 100 -24.1 -3.03151 | opp_overlap 1605127 1605132, overlap 1605127 1605132 TCCGCCAAATCAAAC GAAAGGGCGCACGTT TCAA AACGTGCGCCCTTTC ATGTAATGGATGGAG TERM 1708 1605132 - 1605157 + T 100 -19.1 -3.8647 | opp_overlap 1605128 1605127 1605132, overlap 1605127 CCAAATCAAACGAAA GGGCGCACGTT TCAA AACGTGCGCCC TTTCATGTAATGGAT TERM 1709 1605157 - 1605132 - T 100 -19.1 -4.17878 | opp_overlap 1605132 1605127, overlap 1605128 1605127 CCAAATCAAACGAAA GGGCGCACGTT TCAA AACGTGCGCCC TTTCATGTAATGGAT BAD_1287 1606364 - 1605189 - | beta-glucosidase TERM 1710 1605434 - 1605444 + g 71 -6.8 -4.18762 | overlap 1605423 1605422 GGCGGTCATCGGCAG TGGC GAT GCCA TTTTCGGTGACGATT TERM 1711 1606301 - 1606330 + g 72 -13.5 -2.52464 | CGTTGTTCCCTTCAA TCTGGTGCGCGGC CGTG GACGCGCCCCAGA TGAATTCCGGCGGGA BAD_1288 1607254 - 1606376 - | sugar ABC transporter malF 1608173 - 1607256 - | ABC transporter sugar permease TERM 1712 1608119 - 1608147 + g 70 -5.2 -4.48483 | GAATCGTACGGCGGC GGCGGAGGAC GTTGCCCGA GCCCTCCGTC TTTGTCTTTCTTGTC BAD_1290 1609476 - 1608178 - | sugar ABC transporter binding protein TERM 1713 1609502 - 1609541 + r 81 -11.7 -3.54424 | opp_overlap 1609502, overlap 1609498 TTTGATTCATATCAA TCTAACCGCTTAGATTG ATATTA CAATTTAAGCGCTTAGA TTTGAGGAAGTCAAG rbsR 1610719 - 1609583 - | ribose operon repressor TERM 1714 1610582 - 1610614 + g 72 -14.2 -2.58212 | opp_overlap 1610582 1610587, overlap 1610581 GCCGCTGGGAACGTA GCCAAGCTCCTCGG CGACC CTGAGGACCTTGGC CTTGGTATCATCCTT TERM 1715 1610997 - 1610960 - R 100 -7 -5.64421 | gap 1 ACGGGAAATAAAAAA GCCCTTCCGG-GAACCC GCATG GGGTCAGCCGGAAGAAC CGGGAGGAGGAACAA TERM 1716 1611068 - 1611032 - R 100 -12.4 -5.24129 | gap 2, opp_overlap 1611030 1611055, overlap 1611033 TTCGGGGATAAAAAA TGGGGTTCCCG--GAGCA GGA TGCTCGACGGGAACCCCC AACGTTTGAAGCGGC TERM 1717 1611067 - 1611033 - R 100 -15.9 -3.73995 | gap 2, opp_overlap 1611030 1611055, overlap 1611032 TCGGGGATAAAAAAT GGGGTTCCCG--GAGCA GGA TGCTCGACGGGAACCCC CAACGTTTGAAGCGG BAD_1292 1618374 - 1616830 - | DNA polymerase III TERM 1718 1618508 - 1618463 - R 100 -13.3 -4.07885 | opp_overlap 1618466 1618466 1618472, overlap 1618465 1618466 TAGCGGCCCGCAAAA TACGGGAAGCGTCTCTCAGGC GTTT GCTTGAGAGACGCTTCCACTT GTTCTGACACACGGC TERM 1719 1618506 - 1618465 - R 100 -15.9 -3.63744 | opp_overlap 1618466 1618466 1618472, overlap 1618463 1618466 GCGGCCCGCAAAATA CGGGAAGCGTCTCTCAGGC GTTT GCTTGAGAGACGCTTCCAC TTGTTCTGACACACG TERM 1720 1618466 - 1618506 + r 100 -21.4 -3.78934 | gap 1, opp_overlap 1618465 1618463 1618466, overlap 1618466 1618472 CGGCCCGCAAAATAC G-GGAAGCGTCTCTCAGGC GTTT GCTTGAGAGACGCTTCCAC TTGTTCTGACACACG TERM 1721 1618466 - 1618505 + r 100 -21.6 -2.87146 | opp_overlap 1618466 1618465 1618463, overlap 1618466 1618472 CGGCCCGCAAAATAC GGGAAGCGTCTCTCAGGC GTTT GCTTGAGAGACGCTTCCA CTTGTTCTGACACAC TERM 1722 1618505 - 1618466 - R 100 -19.4 -2.78032 | opp_overlap 1618466 1618466 1618472, overlap 1618465 1618463 CGGCCCGCAAAATAC GGGAAGCGTCTCTCAGGC GTTT GCTTGAGAGACGCTTCCA CTTGTTCTGACACAC def 1619267 - 1618611 - | peptide deformylase mrsA 1620670 - 1619291 - | phosphomannomutase TERM 1723 1620930 - 1620874 - R 100 -13.3 -4.56367 | opp_overlap 1620877, overlap 1620877 CACTTGATAAAGAAA TACCCCCTAACTATCATTTTCCGTTGA AAA TCAGCGAAAAATAAGAGTTAGAGGTTA TGAAAGCCAGCACGC TERM 1724 1620877 - 1620927 + r 71 -10.6 -3.28712 | opp_overlap 1620874 1620877 TTGATAAAGAAATAC CCCCTAACTATCATTTTCCGTTGA AAA TCAGCGAAAAATAAGAGTTAGAGG TTATGAAAGCCAGCA TERM 1725 1620927 - 1620877 - R 86 -15 -2.92499 | opp_overlap 1620877, overlap 1620874 TTGATAAAGAAATAC CCCCTAACTATCATTTTCCGTTGA AAA TCAGCGAAAAATAAGAGTTAGAGG TTATGAAAGCCAGCA TERM 1726 1621055 - 1621009 - R 95 -12.5 -4.18018 | gap 1 GCCTTCGACGCAAAA TGCCCCCTAATC-CTTATTTTC AAGC GAAAACCGGGGATTAGGGGGCA TAAATGCCGATATAC TERM 1727 1621120 - 1621108 - R 74 -7.7 -4.21922 | GCACCCAAAATCAAA GTCGT GCG ACGAC ATGACGGACTCTAAG TERM 1728 1621282 - 1621268 - R 75 -7.1 -4.4648 | opp_overlap 1621277 1621280 AGCGCCATCAGAAAA GCGCT ATCAG AGCGC GGCGTTGAAGTCGCG pepN 1623883 - 1621274 - | aminopeptidase N TERM 1729 1623942 - 1623910 - R 89 -13.4 -3.65812 | opp_overlap 1623910 TTTCTGGTAACAGAA GGCGGCGCGATCAG TTGTG CCGATCACGTCGCC TTGATTCAATTTATG TERM 1730 1623910 - 1623942 + r 80 -11.9 -3.44289 | opp_overlap 1623910 TTTCTGGTAACAGAA GGCGGCGCGATCAGT TGT GCCGATCACGTCGCC TTGATTCAATTTATG BAD_1296 1625950 - 1623971 - | hypothetical protein TERM 1731 1624393 - 1624436 + g 72 -11.6 -3.31144 | overlap 1624364 1624416 CGACCGCGGCCTGGC CGTGGTACAGGTCGACGACG TCGC CGTCTTCGGCCAGCACGACG TTCTGCGGATCGACG TERM 1732 1625890 - 1625912 + g 80 -11.2 -3.78442 | CTGCGGTTTCAGTGC GCTTGGCAGC CTT GCTGCCGCGC TTGTGTGTTGTTGTC dapA 1626980 - 1626060 - | dihydrodipicolinate synthase BAD_1298 1628430 - 1627036 - | MFS family transporter TERM 1733 1627242 - 1627192 - G 79 -16.2 -2.75039 | gap 1, overlap 1627159 1627183 1627212 CAGATAGCCGAACGA CTGCGCGACGCCCGACAGCACCA CGGTTT CGGCGCTGTCATGC-CCGCGCAG CGCGATCAGTGCGAG BAD_1299 1629301 - 1628414 - | RpiR family transcriptional regulatory protein TERM 1734 1630029 - 1630048 + G 73 -10.7 -3.63627 | GAAAGCCGGCACGCT CGCCACC GCGTGG GGTGGCG TTTCCAGTCTGCAGG TERM 1735 1630219 - 1630230 + G 71 -5.8 -4.33819 | TTGGCGATTATTCGC CCGT ACGA ACGG TTTGTTGTGGATGCT pucH 1629544 - 1630380 + | putative allantoinase TERM 1736 1630463 - 1630414 - T 100 -9.3 -5.11063 | gap 1, opp_overlap 1630418 1630420 ACCATTCAACAAAAA TCCCCAACCCGCCGATGGCCGGAT GTC ATTCGATG-TCGGCAGATTGGGGA CGGACGAGAATCAGG actP 1633483 - 1630481 - | ActP copper transport ATPase TERM 1737 1632750 - 1632730 - G 76 -9.7 -4.08064 | overlap 1632718 AACCGCTGCGGAAAA TCGGCAATG CCG CATAGCCGA CAATCGGCAGCATCA TERM 1738 1632866 - 1632905 + g 85 -3.4 -5.41143 | overlap 1632865 1632867 1632883 GAGACGGGCGACGAG GGCGCGGATGTCCGTTTC GCCG GAATCGGGCGTTTGGGCG TTTTTTTGCGCGGTC BAD_1302 1633572 - 1633862 + | hypothetical protein TERM 1739 1633920 - 1633888 - T 100 -9.1 -5.626 | opp_overlap 1633888 TACGCCATAAAAAAA CTGCCGACGGAAG ACACATG CACCCATCGGCAG TTTGAAAAAAGAATT dapB 1634803 - 1633940 - | dihydrodipicolinate reductase BAD_1304 1636236 - 1634863 - | transport protein BAD_1305 1640480 - 1636410 - | ATP-dependent DNA helicase TERM 1740 1636754 - 1636790 + g 71 -8 -4.07568 | gap 2 CGAGCTGGGGCATGT CGACGACGAGC-TG-GCG TTC CGCCCATGCTGGACGTCG TTTTGCCCACGGCGA TERM 1741 1638047 - 1638059 + g 70 -3.3 -4.62302 | CGGACGGGTCTTCCA GCCAA GTG TGGGC TTTTTCGAAGTATTC BAD_1306 1643704 - 1640507 - | hypothetical protein TERM 1742 1641046 - 1641060 + g 79 -7.8 -4.4767 | overlap 1641023 1641047 ACAGGGAGCGTCCGT TCGGCA CTT TGCCGG TTTTGTAGTCGATCA TERM 1743 1642188 - 1642200 + g 73 -4.7 -4.66537 | TCGGCGCGGGTGAGC GCCAC AAG GAGGC TTTTCTGTTCGGAGG TERM 1744 1642603 - 1642623 + g 100 -13.3 -4.39002 | overlap 1642583 1642594 TGGCCGCGCGGCCTT CGGCGTTGT TGC GCAACGCCG TTTTCTGCCAGATTT BAD_1307 1644221 - 1643718 - | hypothetical protein TERM 1745 1644660 - 1644642 - R 70 -5.2 -4.40804 | overlap 1644632 TATCACCGGACAAAA CGGCCG GACAACG CAGCCG GACAAACACAACAGA TERM 1746 1644735 - 1644723 - R 70 -9.1 -3.64685 | AAAACCTGCGAACAA TCCGC GAT GCGGA ATGCGGCTACTGCAG BAD_1308 1645815 - 1644742 - | putative beta-lactamase (class A) precursor TERM 1747 1644882 - 1644896 + g 78 -7 -4.63218 | AATCGTTCTCCACGC CCGGAG CCT CACCGG TTTTGTTCGCGCACG TERM 1748 1645692 - 1645648 - G 80 -15 -3.05844 | gap 1 GGCCGCAGCGGAAGA GGCCGCGCCATGGC-GTCGCG CTCC CGCAATTGCAATGGCGCAGCC GGCGAGCGCCACGGC BAD_1309 1647072 - 1645825 - | hypothetical protein TERM 1749 1646576 - 1646588 + g 71 -6.2 -4.40572 | GCCTTGCTTGATTTG CCGG ATCCG CCGG TTTTATCCGACTTGT BAD_1310 1647280 - 1648701 + | serine_threonine protein kinase TERM 1750 1651894 - 1651869 - g 76 -13.3 -3.01712 | gap 1, overlap 1651854 CGCTGCGTCCGAACA CCGCGGCCACCG TGC CGGTGGC-GCAG AACGACATTTCCGGG TERM 1751 1653268 - 1653241 - g 76 -9.9 -3.75024 | gap 1, overlap 1653238 CGCGAGCACCAACAA GGTGGTCGTCAC CGTGC GCGACG-CCACC AAAACAAAGGAACGT BAD_1311 1648781 - 1654906 + | fibronectin type III domain-containing protein TERM 1752 1655189 - 1655153 - g 80 -15.1 -3.09834 | overlap 1655170 CACGGCACCACCCAA CCGGCGTTGCCGCAACA GTC CGCCCCGGCAACGCCGA ACCAGCCGCGGTTCC moxR 1654979 - 1656328 + | methanol dehydrogenase regulatory protein BAD_1313 1656378 - 1657598 + | hypothetical protein TERM 1753 1658854 - 1658836 - g 72 -11 -3.40403 | TTCGTTCTACTACAA CACCGACA CTA TGTCGGCG ATCTACCCTTCGCGC BAD_1314 1657595 - 1660066 + | hypothetical protein ppp 1660063 - 1660923 + | phosphoprotein phosphatase BAD_1316 1660954 - 1661694 + | hypothetical protein TERM 1754 1661765 - 1661724 - T 100 -16 -3.63068 | opp_overlap 1661726 1661729, overlap 1661726 1661729 TCAGACCATTTGAAA CATAAGGGGTTGTCGCGG GAATCT CCGTGACAACCCCTTATC GTCTTACCGCTAACC TERM 1755 1661763 - 1661726 - T 100 -18.6 -3.39286 | opp_overlap 1661726 1661729, overlap 1661724 1661729 AGACCATTTGAAACA TAAGGGGTTGTCGCGG GAATCT CCGTGACAACCCCTTA TCGTCTTACCGCTAA TERM 1756 1661726 - 1661763 + T 100 -21.5 -2.74523 | opp_overlap 1661726 1661724 1661729, overlap 1661729 AGACCATTTGAAACA TAAGGGGTTGTCGCGGG AATC TCCGTGACAACCCCTTA TCGTCTTACCGCTAA TERM 1757 1661729 - 1661760 + T 100 -18.8 -3.52073 | opp_overlap 1661726 1661724 1661729, overlap 1661726 CCATTTGAAACATAA GGGGTTGTCGCGGG AATC TCCGTGACAACCCC TTATCGTCTTACCGC TERM 1758 1661760 - 1661729 - T 100 -15.9 -3.82946 | opp_overlap 1661729 1661726, overlap 1661726 1661724 CCATTTGAAACATAA GGGGTTGTCGCGG GAATCT CCGTGACAACCCC TTATCGTCTTACCGC BAD_1317 1662524 - 1661856 - | hypothetical protein TERM 1759 1662918 - 1662863 - R 100 -33.7 -3.02649 | opp_overlap 1662869 1662875, overlap 1662867 1662869 1662875 ATCCCACGACATATA GATATAGCGAAAGGCGGAACCGACC GGTATT GGTCGGTTCCGCCTTTCGCTATGTC AGATGATTCGTCTGT TERM 1760 1662914 - 1662867 - R 100 -33.1 -3.08912 | opp_overlap 1662869 1662875, overlap 1662863 1662869 1662875 CACGACATATAGATA TAGCGAAAGGCGGAACCGACC GGTATT GGTCGGTTCCGCCTTTCGCTA TGTCAGATGATTCGT TERM 1761 1662869 - 1662912 + r 100 -32 -2.90688 | opp_overlap 1662867 1662863 1662869 1662875, overlap 1662875 CGACATATAGATATA GCGAAAGGCGGAACCGACCG GTAT TGGTCGGTTCCGCCTTTCGC TATGTCAGATGATTC TERM 1762 1662912 - 1662869 - R 100 -31.3 -3.09655 | opp_overlap 1662869 1662875, overlap 1662867 1662863 1662875 CGACATATAGATATA GCGAAAGGCGGAACCGACC GGTATT GGTCGGTTCCGCCTTTCGC TATGTCAGATGATTC TERM 1763 1662906 - 1662875 - R 100 -21.7 -3.75937 | opp_overlap 1662869 1662875, overlap 1662869 1662867 1662863 ATAGATATAGCGAAA GGCGGAACCGACC GGTATT GGTCGGTTCCGCC TTTCGCTATGTCAGA TERM 1764 1662875 - 1662906 + r 100 -22.4 -3.74077 | opp_overlap 1662875 1662869 1662867 1662863, overlap 1662869 ATAGATATAGCGAAA GGCGGAACCGACCG GTAT TGGTCGGTTCCGCC TTTCGCTATGTCAGA rpoC 1666967 - 1662954 - | DNA-directed RNA polymerase subunit beta' TERM 1765 1667014 - 1667057 + r 89 -13.7 -3.6682 | TATCACGTTGTTCGG GGACCGACCGCGGCGCACG CTGTGT CATGCAGCGCGGCCGGTCC TTTCGATCACTGGAA rpoB 1670561 - 1667064 - | DNA-directed RNA polymerase subunit beta TERM 1766 1667275 - 1667289 + g 72 -11.4 -3.33261 | opp_overlap 1667265 AAGGACTCCGGGATG CCTGCC GGC GGCAGG TTCTCGCCCTTCACG BAD_1320 1671430 - 1670786 - | hypothetical protein TERM 1767 1671360 - 1671382 + g 71 -7.7 -4.03174 | gap 1, opp_overlap 1671352, overlap 1671352 1671364 CCGAAAACGATGCGG CGGC-GGCGA TACA TCGCCTGCTG TTGTTTCGTACGTTT mutY 1672521 - 1671499 - | A/G-specific adenine glycosylase yibK 1672698 - 1673207 + | RNA methyltransferase TERM 1768 1673268 - 1673224 - T 71 -11.4 -2.93219 | opp_overlap 1673230 1673233 1673258, overlap 1673214 1673230 1673233 AACAGTTTTACAAAC GCAAAAGAGCCCGGCCCTCC GTGCA GGAAGGTCGGGTTCTTTCGT AAGAACGTCAGTTCT TERM 1769 1673262 - 1673230 - T 93 -11.2 -4.39571 | opp_overlap 1673230 1673233 1673258, overlap 1673224 1673233 TTTACAAACGCAAAA GAGCCCGGCCCTCC GTGCA GGAAGGTCGGGTTC TTTCGTAAGAACGTC TERM 1770 1673230 - 1673262 + T 89 -13.4 -3.72893 | opp_overlap 1673230 1673224 1673233, overlap 1673233 1673258 TTTACAAACGCAAAA GAGCCCGGCCCTCC GTGCA GGAAGGTCGGGTTC TTTCGTAAGAACGTC TERM 1771 1673259 - 1673233 - T 71 -11.5 -2.86695 | opp_overlap 1673230 1673233 1673258, overlap 1673230 1673224 ACAAACGCAAAAGAG CCCGGCCCTCC GTGCA GGAAGGTCGGG TTCTTTCGTAAGAAC TERM 1772 1673233 - 1673259 + T 85 -11.5 -4.00042 | opp_overlap 1673233 1673230 1673224, overlap 1673230 1673258 ACAAACGCAAAAGAG CCCGGCCCTCC GTGCA GGAAGGTCGGG TTCTTTCGTAAGAAC BAD_1323 1674640 - 1673276 - | hypothetical protein TERM 1773 1674625 - 1674642 + g 77 -4.1 -4.87893 | overlap 1674615 TGGTCTCGTGGACCT CCATGAT ATTC AGCATGG TTTTTCCTTACGATT BAD_1324 1674979 - 1674707 - | hypothetical protein BAD_1325 1677266 - 1675353 - | beta-fructofuranosidase BAD_1326 1678423 - 1677335 - | LacI-type transcriptional regulator yteU 1679127 - 1678459 - | hypothetical protein BAD_1328 1680082 - 1679144 - | sugar ABC transporter permease TERM 1774 1679987 - 1680003 + g 74 -3.6 -4.78237 | overlap 1679988 GATGACAAAGTCGAC GGCCAG ATCAC CTGGCG TTTTCTTCTGACGTA BAD_1329 1681123 - 1680095 - | polysaccharide ABC transporter permease BAD_1330 1682780 - 1681173 - | ABC transporter TERM 1775 1683181 - 1683144 - R 100 -20 -3.76224 | overlap 1683145 TCGCTACTTACGAAA GGTGCTCCCCTCCTTC AGAAAA GAAGGAGGGGAGCACG AATACGATCACAGAC TERM 1776 1683180 - 1683145 - R 100 -23.5 -2.8552 | overlap 1683144 CGCTACTTACGAAAG GTGCTCCCCTCCTTC AGAAAA GAAGGAGGGGAGCAC GAATACGATCACAGA TERM 1777 1683319 - 1683364 + r 100 -25.5 -4.67011 | opp_overlap 1683310 1683319 1683320, overlap 1683317 1683320 GTAAATCGTGCAAAA CGCGCGTTGGCGCACGTCCTT TTTC ATGGGCGTGCGCCAACGCGCA TTTTTGCATCGGCTT TERM 1778 1683364 - 1683319 - R 100 -25.5 -4.12942 | opp_overlap 1683317 1683319 1683320, overlap 1683310 1683320 GTAAATCGTGCAAAA CGCGCGTTGGCGCACGTCCTT TTTC ATGGGCGTGCGCCAACGCGCA TTTTTGCATCGGCTT TERM 1779 1683363 - 1683320 - R 100 -26.8 -3.07283 | opp_overlap 1683317 1683320 1683319, overlap 1683310 1683319 TAAATCGTGCAAAAC GCGCGTTGGCGCACGTCCTT TTTC ATGGGCGTGCGCCAACGCGC ATTTTTGCATCGGCT TERM 1780 1683320 - 1683363 + r 100 -29 -3.39483 | opp_overlap 1683310 1683319 1683320, overlap 1683317 1683319 TAAATCGTGCAAAAC GCGCGTTGGCGCACGTCCTT TTTC ATGGGCGTGCGCCAACGCGC ATTTTTGCATCGGCT galK 1684636 - 1683386 - | galactokinase TERM 1781 1684325 - 1684309 - G 72 -12.3 -3.06831 | GCAATGCCCAGGCAA CGCCTAC CGG GTAGGCG GCCCAGCCTTCCACA galT1 1685918 - 1684668 - | galactose-1-phosphate uridylyltransferase BAD_1333 1686744 - 1685923 - | DeoR-type transcriptional regulator TERM 1782 1686568 - 1686526 - G 75 -8.3 -4.1899 | opp_overlap 1686530 CGACTTTACGGAAAA CAGCGGTTCGCTCAGCAGC GTGCT GGTGCTGACGGCACCGCCG TGCACGCGCTTCAGC TERM 1783 1687652 - 1687635 - g 71 -5.5 -4.42788 | overlap 1687636 CCGAACTGGACAAAA TCGACCG TCCG CAGCCGA CGCTCGTCAAAATGC BAD_1334 1687064 - 1688077 + | dihydroorotate dehydrogenase 2 baiC 1689464 - 1688343 - | NADH-dependent flavin oxidoreductase YqjM TERM 1784 1689564 - 1689585 + r 100 -14.4 -3.92602 | opp_overlap 1689564 GCATTGTAAGCAGAA CGCCCGCC GGTTGG GGCGGGCG TTTATGGACTGTTCA TERM 1785 1689585 - 1689564 - R 95 -14.4 -3.51825 | opp_overlap 1689564 GCATTGTAAGCAGAA CGCCCGCC GGTTGG GGCGGGCG TTTATGGACTGTTCA BAD_1336 1691990 - 1689690 - | penicillin-binding protein TERM 1786 1691175 - 1691216 + g 74 -10.9 -3.5002 | gap 1 GGTGATGTAGCCCTG GTCGTGCATCAGCTGCAGCA CGA TGTTGC-GCTGGTGTTCGGC TTCCTTCTGGTTGGC BAD_1337 1692903 - 1692115 - | transcriptional regulator snoP 1694284 - 1692947 - | lipoate protein ligase TERM 1787 1693744 - 1693758 + g 71 -9.2 -3.76125 | overlap 1693736 TGTTTTTTGCGATTT CCGCGG TTT CTGCGG TTTCCATTGGGCTGG BAD_1339 1695171 - 1694284 - | hypothetical protein TERM 1788 1695304 - 1695267 - R 84 -13.3 -3.07043 | opp_overlap 1695279 CTGATTATGCGAAGA CGCCCACCGTTCCAAGG AAAA CCTTGTTTCGGCGGGCG TCTCACCAAATGGAA leuB 1696389 - 1695349 - | 3-isopropylmalate dehydrogenase TERM 1789 1695639 - 1695667 + g 72 -11.7 -3.35996 | overlap 1695632 CGACCACGGCACCGG CCTCGTCGGTGAT GAT GTCGCCGAAGAGG TTGTCGGTCAGGATC TERM 1790 1696631 - 1696587 - R 100 -18.6 -2.87931 | opp_overlap 1696589 1696591 CGCACCGCCCACATA CGCACGTTGGCGCCGTGGAC AGATG GTCCGCGACGCCAACGTGTA TGTGGCGAATCGGCT TERM 1791 1696589 - 1696629 + r 100 -23.4 -2.87931 | opp_overlap 1696587, overlap 1696591 CACCGCCCACATACG CACGTTGGCGCCGTGGAC AGATG GTCCGCGACGCCAACGTG TATGTGGCGAATCGG TERM 1792 1696591 - 1696627 + r 100 -20.2 -2.9914 | opp_overlap 1696587, overlap 1696589 CCGCCCACATACGCA CGTTGGCGCCGTGGAC AGATG GTCCGCGACGCCAACG TGTATGTGGCGAATC BAD_1341 1697136 - 1696654 - | hypothetical protein TERM 1793 1697983 - 1697942 - R 100 -18.3 -3.57309 | opp_overlap 1697948, overlap 1697948 GAAAATTTTCTGAAA CAAAAACCCATTGCCGCAA ACGA TTGCAACAATGGGTTTTCG TCAGTCATGATTCTT TERM 1794 1697948 - 1697977 + r 84 -9.3 -4.28994 | opp_overlap 1697942 1697948 TTTCTGAAACAAAAA CCCATTGCCGCAA ACGA TTGCAACAATGGG TTTTCGTCAGTCATG TERM 1795 1697977 - 1697948 - R 100 -13.7 -5.27335 | opp_overlap 1697948, overlap 1697942 TTTCTGAAACAAAAA CCCATTGCCGCAA ACGA TTGCAACAATGGG TTTTCGTCAGTCATG ptrB 1700572 - 1698038 - | protease II TERM 1796 1699052 - 1699006 - G 74 -12.8 -3.14211 | overlap 1698992 1699019 AGGGGTTGCCACCAA CGCCGATCGAATACAGGCGGCG CGT CTCCCCCGGCATGCGGTCGGCG GTGGCGCCGTCCGAC TERM 1797 1700619 - 1700586 - R 86 -16.1 -2.79915 | opp_overlap 1700610 1700616 1700617 ATGCACGCGATTATA CTGACGACCCACACA AACT TGTGTCGGCCGTCAG TCGCCGTTTTGCGCG BAD_1343 1701830 - 1700616 - | hypothetical protein TERM 1798 1701115 - 1701131 + g 83 -4.3 -5.01732 | overlap 1701116 TTGAACAGCAGGTTC ATGCTGG CCA CCGGCAC TTTTTTGCGCGGATT gcvH 1702469 - 1702020 - | glycine cleavage system H protein BAD_1345 1704354 - 1702480 - | hypothetical protein TERM 1799 1703746 - 1703764 + g 78 -6.6 -4.63527 | CACGGTGGTGTTCTT CACGGCGG CCG TCACCGTG TTTTTCAGCTGGTCG TERM 1800 1703887 - 1703863 - G 82 -12.1 -3.61398 | GTGTGCGGTGAAGAA GCCGGCGATCG CGG CGACCACCAGC ACGGCGAGCACGATT BAD_1346 1705559 - 1704462 - | hypothetical protein TERM 1801 1704669 - 1704687 + g 70 -10.2 -3.46336 | overlap 1704667 AGACGAGGGGAACGG CCACGGCT GGG AGCCGAGG TATTTGAGTTCGCCT TERM 1802 1705368 - 1705406 + g 74 -11.6 -3.53811 | overlap 1705377 1705378 GTTGGCGTAGTCGGC GATGGCGCCTTGGCCGTG CGG CACGGCCACTTTGCCGTC TTTGACGAGGATGAC TERM 1803 1705377 - 1705397 + g 77 -11.1 -3.695 | overlap 1705368 1705378 GTCGGCGATGGCGCC TTGGCCGTG CGG CACGGCCAC TTTGCCGTCTTTGAC TERM 1804 1705378 - 1705396 + g 77 -14.6 -2.81218 | overlap 1705377 1705368 TCGGCGATGGCGCCT TGGCCGTG CGG CACGGCCA CTTTGCCGTCTTTGA BAD_1347 1706567 - 1705707 - | alpha beta hydrolase TERM 1805 1706066 - 1706089 + g 73 -10.2 -3.57792 | overlap 1706067 1706087 GCACGGCGAATCCCA TGACCGGCTC GTGT GTGCCGGTCG TTTCGCAGTCGGTGG BAD_1348 1707260 - 1706640 - | hypothetical protein TERM 1806 1707383 - 1707410 + H 91 -7.8 -5.0538 | GCAAACGGGCTTTCG CAATATTGCGCA GCAT TGCACGATATTG TTTTTTGAAATCGGC trxA2 1707458 - 1707862 + | thioredoxin BAD_1350 1708021 - 1709016 + | hypothetical protein TERM 1807 1709088 - 1709046 - f 100 -24.5 -3.04322 | gap 1, opp_overlap 1709046 1709050, overlap 1709050 GCGAATTCCTCAATA TGAATGAGCGGTGCATCGCA TATT TGCG-TGCACCGCTCATTCA TATTGCACGCAGTAC TERM 1808 1709046 - 1709088 + F 100 -24.5 -3.02144 | gap 1, opp_overlap 1709046 1709050, overlap 1709050 GCGAATTCCTCAATA TGAATGAGCGGTGCATCGCA TATT TGCG-TGCACCGCTCATTCA TATTGCACGCAGTAC TERM 1809 1709084 - 1709050 - f 100 -19.5 -3.36452 | gap 1, opp_overlap 1709046 1709050, overlap 1709046 ATTCCTCAATATGAA TGAGCGGTGCATCGCA TATT TGCG-TGCACCGCTCA TTCATATTGCACGCA TERM 1810 1709050 - 1709084 + F 100 -19.5 -3.36273 | gap 1, opp_overlap 1709050 1709046, overlap 1709046 ATTCCTCAATATGAA TGAGCGGTGCATCGCA TATT TGCG-TGCACCGCTCA TTCATATTGCACGCA TERM 1811 1709222 - 1709232 + F 78 -2.4 -5.26119 | TAGACAATCTGCGAA GCCC CAC GGGA TTTTCTTTTTGCAGA TERM 1812 1709456 - 1709494 + G 84 -11.6 -4.0896 | opp_overlap 1709420, overlap 1709445 CGTTCGTGCGGACCA TCCGAACGTTCGTGCGGA CCA TCCGAACGTTCGTGCGGA TTTTCAGCAACCTTT lpp 1709382 - 1709594 + | prolipoprotein TERM 1813 1710757 - 1710741 - g 73 -10.1 -3.67737 | opp_overlap 1710752 1710754 CACAAAATTGGGAAA GCGACGA AGC TCGCCGC ACAGCGCTGTCTTCA BAD_1352 1709897 - 1710904 + | hypothetical protein BAD_1353 1711473 - 1711018 - | hypothetical protein TERM 1814 1711651 - 1711601 - R 100 -17.3 -4.87803 | opp_overlap 1711601 GAGGGGTAAATAAAA GGGTGTAAATATCACAATCTACA ACTTA CGTAAATTGCAATATTTACACCC TTAAATAGTACAAAT BAD_1354 1712757 - 1711687 - | hypothetical protein BAD_1355 1713149 - 1713466 + | transcriptional regulator BAD_1356 1713713 - 1714243 + | hypothetical protein TERM 1815 1714286 - 1714308 + F 100 -13.4 -5.11937 | opp_overlap 1714286 ACTTACGTTCATGAA GGGCTTGGGG CAT TCCCAGGCCC TTTTTTACGCTTATT BAD_1357 1714369 - 1714905 + | hypothetical protein TERM 1816 1714962 - 1714997 + F 80 -11.9 -3.32471 | opp_overlap 1714966, overlap 1714955 1714961 1714963 1714966 TCAGCGCCCTCCCCC ACAAGGAGCTTTCCC CCATCT GGGAGGGCTCCTTGC TATTATGAGTTTGTT TERM 1817 1714963 - 1714996 + F 83 -15.4 -2.58398 | opp_overlap 1714966, overlap 1714955 1714962 1714961 1714966 CAGCGCCCTCCCCCA CAAGGAGCTTTCCC CCATCT GGGAGGGCTCCTTG CTATTATGAGTTTGT TERM 1818 1714966 - 1714993 + F 75 -11.3 -3.42861 | opp_overlap 1714966, overlap 1714955 1714963 1714962 1714961 CGCCCTCCCCCACAA GGAGCTTTCCC CCATCT GGGAGGGCTCC TTGCTATTATGAGTT BAD_1358 1715043 - 1716539 + | Etk-like tyrosine kinase TERM 1819 1716597 - 1716571 - f 100 -16.7 -3.68988 | opp_overlap 1716571 GCTGATTCAAGAGAA GGCTGGAAACC GCTGT GGTTTCCAGCC TTTCTTTATGTCTTC TERM 1820 1716571 - 1716597 + F 100 -17.4 -4.68132 | opp_overlap 1716571 GCTGATTCAAGAGAA GGCTGGAAACCG CTG TGGTTTCCAGCC TTTCTTTATGTCTTC TERM 1821 1716650 - 1716668 + F 71 -10.2 -3.24161 | overlap 1716648 TCGATCTTTTCGTTT CGAGCCGG TTT CCGTCTCG TCTTATGCGCCTTTC BAD_1359 1716673 - 1717113 + | hypothetical protein BAD_1360 1718088 - 1717114 - | hypothetical protein TERM 1822 1717695 - 1717716 + g 77 -8.1 -4.3078 | gap 1 TGACGATCCACCGTT TCCAAG-AGC CTG GCTGCTTGGA TTTCTTCGTATGCTT TERM 1823 1718631 - 1718606 - g 100 -15.5 -4.52781 | opp_overlap 1718603 CAAGCACAATGAAAA GGAGGAGCCGA CGCA TCGACTCCTCC CAGGTTTCGCCCGAA BAD_1361 1718316 - 1718732 + | ribonuclease BAD_1362 1719087 - 1718779 - | hydroxymethylglutaryl-CoA synthase oppA 1719474 - 1719103 - | ABC transporter BAD_1364 1719983 - 1719489 - | putative transcriptional regulator TERM 1824 1719986 - 1720036 + H 86 -15.6 -2.78813 | overlap 1719986 GCTGACCATCCATGG TTCCCTCCTGTGGTGGATATTACT TAT AGTAATATCCACCACAGGCTCGAC ATTATTACCGTCAAC TERM 1825 1719986 - 1720037 + H 95 -14 -3.65046 | gap 1, overlap 1719986 GCTGACCATCCATGG T-TCCCTCCTGTGGTGGATATTACT TAT AGTAATATCCACCACAGGCTCGACA TTATTACCGTCAACC TERM 1826 1720600 - 1720580 - g 74 -11.3 -3.45031 | opp_overlap 1720564, overlap 1720565 1720560 GGTTCAAAAATTGAA CCATATATG AAA CATATATGG GGATGTGAATTCATT TERM 1827 1720913 - 1720889 - g 74 -3.5 -4.7871 | AAGCACGACGAAAAA GCCTTTGATCA AGT CGAACAAATGC GAAGAGACGAACGCA BAD_1365 1720169 - 1721080 + | hypothetical protein BAD_1366 1722939 - 1721512 - | hypothetical protein TERM 1828 1722095 - 1722081 - G 81 -5 -4.89339 | opp_overlap 1722081, overlap 1722083 AATCATTCACAAAAA TCGGAT GAA ATCCAA TTGATTCCCATTGAG TERM 1829 1722517 - 1722503 - G 73 -5 -4.62957 | overlap 1722493 AGAAGTAAATCAAAA TTTAGC GTC GCCAAA TGAACAGATTCCTGA BAD_1367 1723289 - 1724071 + | putative transposase TERM 1830 1725758 - 1725772 + G 73 -10 -3.65812 | GAAAGGGTATTTTTA TCAGGG ATC CCCTGA TTCTGTTAAAAGAAA BAD_1368 1725186 - 1726190 + | phage AbiD protein BAD_1369 1727646 - 1726660 - | ISSdy1_ transposase OrfB TERM 1831 1727426 - 1727473 + g 72 -12.7 -3.04263 | gap 2, overlap 1727433 TCCTCAGCTCGATCA GCTCGTTCCGCTCGGGCGTGCGG TTGT CCGCG-GCCCGGGTGGAGCC-GC TGTTGCGGATGCCCT BAD_1370 1727786 - 1728859 + | ImpB/MucB/SamB family protein BAD_1371 1728997 - 1729410 + | Na+/H+-dicarboxylate symporter yvgS 1729624 - 1729361 - | hypothetical protein TERM 1832 1729460 - 1729427 - G 72 -13.4 -2.62933 | gap 1, overlap 1729416 1729415 GAAGCTTTCATACGA CGAGTTGAGCAT-GT CATTC ACTATGCTCAACTCG AGGTTGAAGAACGGA TERM 1833 1729601 - 1729590 - G 78 -4.4 -4.72497 | GAGTGATTAATAAAA TGGT CATG ACCA AAAGGCGCGCGGCCT TERM 1834 1729749 - 1729762 + r 71 -9.5 -3.55122 | overlap 1729745 CGCCCTTATAGTGGG GCGGC TTGC GCCGC TTGGTTTGCATAATA tnpB 1730671 - 1729739 - | transposase subunit B TERM 1835 1730722 - 1730708 - R 82 -5.6 -5.00616 | overlap 1730710 CGTGCCGCGAAAAAA GCCGAC GCC GTCGTC AATATCTCGTTCGCC tnp 1732180 - 1730912 - | IS3 family transposase TERM 1836 1733270 - 1733303 + H 86 -14 -2.9155 | opp_overlap 1733259 1733261, overlap 1733267 CGAACAGGCACGCCC CGGACTCGTCG-CCCG TGAC CGGGTCGACGA-TCCG TATGGTCTTACCGGC BAD_1375 1733917 - 1735380 + | putative transposase BAD_1376 1735451 - 1736155 + | insertion element hypothetical protein BAD_1377 1736720 - 1736388 - | insertion element IS6110 hypothetical protein BAD_1378 1736813 - 1737055 + | hypothetical protein TERM 1837 1737126 - 1737068 - T 100 -15.8 -3.97834 | gap 1, overlap 1737071 1737073 TAATCGGAGTACAAA GGAGACTATTAGTTATGTCGTTACAGT TATCTG ACTGTAACGACATAACTAATAGTCAA- CCCTGGATTATCAAT TERM 1838 1737124 - 1737071 - T 100 -28.8 -3.04122 | overlap 1737068 1737073 TCGGAGTACAAAGGA GACTATTAGTTATGTCGTTACAGT TATCTG ACTGTAACGACATAACTAATAGTC AACCCTGGATTATCA TERM 1839 1737122 - 1737073 - T 100 -25.6 -3.07455 | overlap 1737071 1737068 GGAGTACAAAGGAGA CTATTAGTTATGTCGTTACAGT TATCTG ACTGTAACGACATAACTAATAG TCAACCCTGGATTAT BAD_1379 1738248 - 1737181 - | hypothetical protein BAD_1380 1739436 - 1738378 - | putative O-antigen polymerase fhiA 1739779 - 1739543 - | fhiA protein BAD_1382 1740835 - 1739864 - | hypothetical protein BAD_1383 1741941 - 1740832 - | hypothetical protein capG 1742678 - 1741965 - | hypothetical protein BAD_1385 1743723 - 1742683 - | putative glycosyltransferase BAD_1386 1745135 - 1743720 - | hypothetical protein TERM 1840 1744190 - 1744176 - G 74 -6.4 -4.29738 | opp_overlap 1744176 CCATACCGAGTAAAA CTGACG CTG CATCAG TACCTTGGCGATGAA cotSA 1746414 - 1745140 - | spore coat protein BAD_1388 1747578 - 1746433 - | capsular polysaccharide biosynthesis proteinCps4H BAD_1389 1749206 - 1747674 - | galactosyl transferase CpsD TERM 1841 1748693 - 1748667 - G 76 -7.3 -4.56597 | CTTCCGGCTCAAAAA CTGCAAGGCAT GCTCA ATGCCCTCCAG CGAGCCGACCACCAC BAD_1390 1751293 - 1749320 - | hypothetical protein TERM 1842 1751410 - 1751389 - R 70 -8.7 -3.62046 | GTACTCCCCCAAGAA TTCGACGAG GACA CTCGGCGAA GGCCGTCAACAAGAA BAD_1391 1752624 - 1751431 - | hypothetical protein BAD_1392 1754023 - 1752779 - | regulatory protein TERM 1843 1754142 - 1754102 - R 83 -6.4 -4.87318 | gap 1, overlap 1754103 GCGAAAAGCTAAAAA CGTAGGTATAGAAATGACC ACAT AGT-ATATCTATACCTACA AAATGTCAAAAATGT BAD_1393 1755953 - 1754325 - | hypothetical protein TERM 1844 1755319 - 1755296 - G 73 -8.9 -3.88464 | CCAAAAACAGTGAAA TCACGCCGA TAACCG TCAGCGTGA GGAAGATCGATCGCC BAD_1394 1757440 - 1756322 - | putative 200 kDa antigen p200 mntH 1758919 - 1757636 - | H(+)-stimulated manganese uptake system protein TERM 1845 1758167 - 1758182 + g 72 -2.5 -4.77036 | GGCAACGTCGATTTT GCTGC CGTGAA GTAGC TTTTTGATGCTCGGC BAD_1396 1759085 - 1759939 + | dehydrogenase or reductase protein BAD_1397 1759956 - 1760708 + | hypothetical protein TERM 1846 1760776 - 1760821 + T 100 -15.1 -4.8622 | opp_overlap 1760776 CGGAGTCTCCCGAAA TGTGTCACGATTCGAAA TTTCGGCTGTTT TTTCGAATCGTGACACA TTTTTCCTTCCAAAA TERM 1847 1760821 - 1760776 - T 95 -15.1 -3.53811 | opp_overlap 1760776 CGGAGTCTCCCGAAA TGTGTCACGATTCGAAA TTTCGGCTGTTT TTTCGAATCGTGACACA TTTTTCCTTCCAAAA BAD_1398 1762278 - 1761136 - | hypothetical protein TERM 1848 1761430 - 1761416 - G 80 -10 -4.14243 | TAGTCCAGGCCAAAA CGATGC TCG GCATCG ACAAGATCCAACGTC TERM 1849 1761807 - 1761830 + g 78 -6.7 -4.63218 | overlap 1761808 TCCAGACATGCACGG TCACATCGG CCGACA CCGATGTGC TTTTCTTCACACGGC cysN 1762951 - 1762544 - | sulfate adenylyltransferase subunit 1 TERM 1850 1762682 - 1762637 - G 93 -15.1 -3.85817 | opp_overlap 1762637 ATCTTCCGCTATAAA TGTGTCACGATTCGAAA TTTCGGCTGTTT TTTCGAATCGTGACACA TTTTTCCTTCCCCAA TERM 1851 1762637 - 1762682 + g 100 -15.1 -4.8622 | opp_overlap 1762637 ATCTTCCGCTATAAA TGTGTCACGATTCGAAA TTTCGGCTGTTT TTTCGAATCGTGACACA TTTTTCCTTCCCCAA BAD_1400 1764089 - 1763016 - | LacI-type transcriptional regulator bgaB 1766269 - 1764134 - | beta-galactosidase I BAD_1402 1768547 - 1766292 - | beta-galactosidase precursor BAD_1403 1769422 - 1768589 - | multiple sugar-binding transport system permease malF 1770291 - 1769419 - | ABC-type sugar transport systems, permease components BAD_1405 1771733 - 1770483 - | putative periplasmic binding (signal peptide) ABC transporter protein TERM 1852 1772173 - 1772219 + r 81 -13.1 -3.07816 | gap 1, opp_overlap 1772178, overlap 1772178 GAAAGTCCACAGATA AAAAATCGGCGGCT-CCAAGGA AATA TCCTTGGAAGCCGCCGATATGC TTGCGTGCGTCGCGC TERM 1853 1772214 - 1772178 - R 100 -21.8 -5.4251 | gap 1, opp_overlap 1772173 1772178 TCCACAGATAAAAAA TCGGCGGCT-CCAAGGA AATA TCCTTGGAAGCCGCCGA TATGCTTGCGTGCGT TERM 1854 1772178 - 1772214 + r 100 -21.8 -2.92371 | gap 1, opp_overlap 1772178, overlap 1772173 TCCACAGATAAAAAA TCGGCGGCT-CCAAGGA AATA TCCTTGGAAGCCGCCGA TATGCTTGCGTGCGT pdxT 1773075 - 1772311 - | glutamine amidotransferase subunit PdxT pdxS 1773966 - 1773091 - | pyridoxine biosynthesis protein BAD_1408 1778418 - 1774390 - | ATP binding protein of ABC transporter fadD1 1779064 - 1780887 + | long-chain-fatty acid CoA ligase TERM 1855 1780910 - 1780963 + T 100 -25.6 -5.00616 | opp_overlap 1780910 ATAGGTAAACAAAAA CAGCACGGCGGGGAACGCTG-CGTAC AAAA GTACGTCAAC-TTCCCCGCCGTGCTG TTTTTTAAGCGCACC TERM 1856 1780963 - 1780910 - T 100 -27.8 -5.31519 | opp_overlap 1780910 ATAGGTAAACAAAAA CAGCACGGCGGGGAACGCTG-CGTAC AAAA GTACGTCAAC-TTCCCCGCCGTGCTG TTTTTTAAGCGCACC TERM 1857 1781060 - 1781010 - T 76 -11.9 -3.01791 | gap 1, opp_overlap 1781010 1781013 ACGCGTGCGGTAACA GTGCGGCAGGAAACGCCGGCGTAC GAAG GTACGTCAA-GTTTCCTGCCGTGC TGTTAACGCTCCGTT TERM 1858 1781010 - 1781060 + T 91 -14.1 -3.0464 | gap 1, opp_overlap 1781010, overlap 1781013 ACGCGTGCGGTAACA GTGCGGCAGGAAACGCCGGCGTAC GAAG GTACGTCAA-GTTTCCTGCCGTGC TGTTAACGCTCCGTT TERM 1859 1781013 - 1781057 + T 83 -14.4 -2.74523 | gap 1, opp_overlap 1781010, overlap 1781010 CGTGCGGTAACAGTG CGGCAGGAAACGCCGGCGTAC GAAG GTACGTCAA-GTTTCCTGCCG TGCTGTTAACGCTCC araA 1782593 - 1781079 - | L-arabinose isomerase araD 1783339 - 1782647 - | L-ribulose-5-phosphate 4-epimerase BAD_1412 1785005 - 1783383 - | sugar kinase TERM 1860 1785131 - 1785115 - R 70 -8.7 -3.76224 | overlap 1785100 CCGTGACGCACCAAA TCCGACG TGT CATCGGA GCAATGAATATATAA BAD_1413 1786288 - 1785170 - | LacI-type transcriptional regulator BAD_1414 1787826 - 1786399 - | hypothetical protein thrB 1788827 - 1787823 - | homoserine kinase TERM 1861 1788606 - 1788571 - G 72 -14 -2.52516 | gap 1, overlap 1788570 GCCTGCAGGATGAAT CCGACGCGTCCCAGACC GAA GGTCTGGCATGCG-CGG CGGAACGTGGAGACC thrA 1790315 - 1788999 - | homoserine dehydrogenase TERM 1862 1790451 - 1790404 - R 100 -13.7 -4.78753 | gap 2, overlap 1790446 GGAATATCAAGAAAA TGGACGGTTTCCGAAGCTTTCCC CGCA AGG-AAGCC-CGAAAACCGTCCA TACCGTGAGACGCAA lysA 1792048 - 1790474 - | diaminopimelate decarboxylase argS 1793872 - 1792082 - | arginyl-tRNA synthetase BAD_1419 1795490 - 1793904 - | amino acid permease TERM 1863 1795668 - 1795631 - R 100 -19.2 -3.03159 | gap 1 GGAACGCCCGGAACA GCGACGGCCCGCA-GCC GGGAA GGCATGCGGGCCGTCGA TCGCGCTACTCGCGG psp1 1796087 - 1795698 - | putative translational inhibitor protein TERM 1864 1796238 - 1796224 - R 75 -6.4 -4.62471 | overlap 1796225 TGGAAGCGGGAAAAA CCGTTC ACA GAACGA TATGGCCGGAGTTGG TERM 1865 1796358 - 1796335 - R 100 -14.6 -5.16071 | AACGAGCAACAAAAA GGCTCCAGCC GTTC GACTGGAGCC TTGCCCGGTGGGCTT BAD_1421 1797625 - 1796585 - | hypothetical protein TERM 1866 1797568 - 1797618 + g 100 -12.6 -4.4078 | opp_overlap 1797569 1797572, overlap 1797569 1797576 TACTTGCCTCCAAAA ACACGAAATCGTTGCTGGCACCAA CTA TAGGTGCCAACAACGATTTCCCGG TTTTCATTCCCACGG TERM 1867 1797617 - 1797569 - G 100 -20.5 -4.56775 | opp_overlap 1797569 1797568 1797576, overlap 1797572 ACTTGCCTCCAAAAA CACGAAATCGTTGCTGGCACCAA CTA TAGGTGCCAACAACGATTTCCCG GTTTTCATTCCCACG TERM 1868 1797569 - 1797617 + g 85 -16.1 -3.24146 | opp_overlap 1797569 1797572, overlap 1797568 1797576 ACTTGCCTCCAAAAA CACGAAATCGTTGCTGGCACCAA CTA TAGGTGCCAACAACGATTTCCCG GTTTTCATTCCCACG TERM 1869 1797614 - 1797572 - G 100 -23 -2.93708 | opp_overlap 1797569 1797568 1797576, overlap 1797569 TGCCTCCAAAAACAC GAAATCGTTGCTGGCACCAA CTA TAGGTGCCAACAACGATTTC CCGGTTTTCATTCCC TERM 1870 1797576 - 1797610 + g 93 -15.8 -3.67068 | opp_overlap 1797572 1797569, overlap 1797569 1797568 TCCAAAAACACGAAA TCGTTGCTGGCACCAA CTA TAGGTGCCAACAACGA TTTCCCGGTTTTCAT BAD_1422 1798684 - 1797686 - | hypothetical protein BAD_1423 1799745 - 1798684 - | hypothetical protein TERM 1871 1799872 - 1799860 - H 95 -6.3 -5.43866 | opp_overlap 1799860 1799859 CAAGCCTGAAAAAAA CATGA AAA TCATG CTTTGCCGCTATGGT fkbP1 1799895 - 1800851 + | secreted peptidyl-prolyl cis-trans isomerase protein TERM 1872 1800916 - 1800885 - T 100 -14.6 -4.56775 | opp_overlap 1800890, overlap 1800890 AGGTTCCTCCAAAAA CAAAATAGCCTCCC CCTC GGGAGGCTATTTTC ATATGCATGCAAGTC TERM 1873 1800890 - 1800911 + T 100 -14.5 -4.3586 | opp_overlap 1800885 1800890 CCTCCAAAAACAAAA TAGCCTCCC CCTC GGGAGGCTA TTTTCATATGCATGC TERM 1874 1800911 - 1800890 - T 100 -14.5 -5.26119 | opp_overlap 1800890, overlap 1800885 CCTCCAAAAACAAAA TAGCCTCCC CCTC GGGAGGCTA TTTTCATATGCATGC BAD_1425 1801765 - 1801061 - | hypothetical protein TERM 1875 1801845 - 1801894 + r 100 -19.5 -3.05384 | opp_overlap 1801846 CACGTAAAAGACAAA AGCGGCCCGGTAATCGCAATA CAAAAACA TATTGCGATTACCGGGCCACC TTACGTCAAGCGGAA TERM 1876 1801893 - 1801846 - R 100 -26.6 -4.90471 | opp_overlap 1801845 ACGTAAAAGACAAAA GCGGCCCGGTAATCGCAATACA AAAA CATATTGCGATTACCGGGCCAC CTTACGTCAAGCGGA atpC 1802193 - 1801915 - | F0F1 ATP synthase subunit epsilon atpD 1803677 - 1802193 - | F0F1 ATP synthase subunit beta atpG 1804606 - 1803686 - | F0F1 ATP synthase subunit gamma TERM 1877 1804366 - 1804400 + g 100 -14.4 -4.59773 | opp_overlap 1804366 1804368 CACGATCCGAGGTAA GAGCGAGGACAGCC ACGCGAG GGTTGTCCTCGTTC TTTTTCACGATCGGA atpA 1806238 - 1804610 - | F0F1 ATP synthase subunit alpha atpH 1807137 - 1806310 - | F0F1 ATP synthase subunit delta BAD_1431 1807688 - 1807167 - | F0F1 ATP synthase subunit B atpE 1807975 - 1807748 - | ATP synthase C chain atpB 1808841 - 1808032 - | F0F1 ATP synthase subunit A TERM 1878 1808149 - 1808176 + g 82 -12.8 -3.62046 | CATGCCAGCCGCGAA GGTGATGATGCC GAAC GGCATCATCAGC TTGTTCACCACATCA TERM 1879 1809291 - 1809257 - R 75 -6.4 -4.61527 | gap 1, overlap 1809258 1809277 1809278 AAAACCGCGCAAAAA GCCCACGA-CACCGC GCAAAA GCGGCAATCGTGGGA CAATCGCCAATACTT TERM 1880 1809290 - 1809258 - R 70 -9.9 -3.35832 | gap 1, overlap 1809257 1809277 1809278 AAACCGCGCAAAAAG CCCACGA-CACCGC GCAAAA GCGGCAATCGTGGG ACAATCGCCAATACT metA 1810367 - 1809333 - | homoserine O-succinyltransferase TERM 1881 1810463 - 1810446 - H 79 -2.7 -5.21709 | opp_overlap 1810430 1810429, overlap 1810448 CGTTATACGAAAAAA CGGATAA CGCG TTATCGG ATATGCGATTCCACT TERM 1882 1810669 - 1810648 - H 76 -10.1 -3.78329 | opp_overlap 1810648 CGCTACCAATTGAAA CCGGAAGCC TTTT GGTTTCCGG TTTTTTGTTTTTCTA TERM 1883 1810648 - 1810669 + H 100 -12.3 -5.98675 | opp_overlap 1810648 CGCTACCAATTGAAA CCGGAAGCC TTTT GGTTTCCGG TTTTTTGTTTTTCTA TERM 1884 1811543 - 1811525 - g 72 -11.6 -3.31792 | CGACGATGCGGAGAA CGCGCTGG AAT CCGGCGCG CAGCTGCTGGAACGT BAD_1435 1810911 - 1813169 + | glycanase/glycogenase TERM 1885 1813235 - 1813196 - T 86 -12.8 -3.65224 | overlap 1813199 AGCCGACTTTAACAA GGAGCGCGGGCAGACCAT TCAA ATGGCTCACCCGCGCTTC ACATGCACCTCGCTA TERM 1886 1813232 - 1813199 - T 79 -13.1 -2.94045 | overlap 1813196 CGACTTTAACAAGGA GCGCGGGCAGACCAT TCAA ATGGCTCACCCGCGC TTCACATGCACCTCG BAD_1436 1813951 - 1813271 - | ABC transporter BAD_1437 1814640 - 1813975 - | hypothetical protein TERM 1887 1814048 - 1814037 - G 72 -2.2 -4.79949 | GCGCCAAAAAAAGAA CCGT CAAA ACAG GTACCCAACATGGGA BAD_1438 1815332 - 1814640 - | cation efflux system protein TERM 1888 1814849 - 1814837 - G 75 -2.6 -4.87626 | overlap 1814838 GCGCAATAGCAAAAA GCGC AATCA GCAC CGCGGCGACATGTTC BAD_1439 1816176 - 1815322 - | hypothetical protein TERM 1889 1816243 - 1816206 - R 100 -15.7 -3.75153 | overlap 1816208 CTTCCCGAATCCAAA CAGCGTGGCGTAGAAGA GCAA TCTTCTACGCCACACAA CCATGCTCAGTTATC TERM 1890 1816241 - 1816208 - R 100 -20.5 -3.46068 | overlap 1816206 TCCCGAATCCAAACA GCGTGGCGTAGAAGA GCAA TCTTCTACGCCACAC AACCATGCTCAGTTA BAD_1440 1816660 - 1816250 - | hypothetical protein TERM 1891 1816624 - 1816605 - G 75 -7.8 -4.26938 | overlap 1816608 1816611 GTTATAAAACAACAA GAAGCAGC CACA GCTGCTGC AACTGCAACCACTCG TERM 1892 1816630 - 1816608 - G 75 -8.4 -4.22309 | overlap 1816605 1816611 ATAAAACAACAAGAA GCAGCCACAG CTG CTGCAACTGC AACCACTCGGCCTGC BAD_1441 1816845 - 1817066 + | 2-oxoglutarate/malate translocator-like protein BAD_1442 1817059 - 1817715 + | two-component response regulator BAD_1443 1817742 - 1818929 + | hypothetical protein TERM 1893 1819472 - 1819426 - f 71 -10.9 -3.19304 | opp_overlap 1819427 1819431, overlap 1819422 1819420 1819427 1819430 1819431 CGCAAAACACATAGA TCAAGGGCGGGTTGAAGACGT TTCTC ACGTTTTCAACCCGGCTTTGT GCATTCCGTAGGTGG TERM 1894 1819471 - 1819427 - f 81 -14.4 -2.50859 | opp_overlap 1819427 1819431, overlap 1819426 1819422 1819420 1819430 1819431 GCAAAACACATAGAT CAAGGGCGGGTTGAAGACGT TTCTC ACGTTTTCAACCCGGCTTTG TGCATTCCGTAGGTG TERM 1895 1819427 - 1819471 + F 100 -18.8 -2.55213 | opp_overlap 1819427 1819426 1819422 1819420 1819430 1819431, overlap 1819431 GCAAAACACATAGAT CAAGGGCGGGTTGAAGACGT TTCTC ACGTTTTCAACCCGGCTTTG TGCATTCCGTAGGTG TERM 1896 1819468 - 1819430 - f 73 -10.3 -3.38329 | opp_overlap 1819427 1819431, overlap 1819427 1819426 1819422 1819420 1819431 AAACACATAGATCAA GGGCGGGTTGAAGACGT TTCTC ACGTTTTCAACCCGGCT TTGTGCATTCCGTAG TERM 1897 1819467 - 1819431 - f 78 -13.8 -2.61913 | opp_overlap 1819427 1819431, overlap 1819430 1819427 1819426 1819422 1819420 AACACATAGATCAAG GGCGGGTTGAAGACGT TTCTC ACGTTTTCAACCCGGC TTTGTGCATTCCGTA TERM 1898 1819431 - 1819467 + F 100 -16 -3.98083 | opp_overlap 1819431 1819430 1819427 1819426 1819422 1819420, overlap 1819427 AACACATAGATCAAG GGCGGGTTGAAGACGT TTCTC ACGTTTTCAACCCGGC TTTGTGCATTCCGTA ppa 1819806 - 1820294 + | inorganic pyrophosphatase TERM 1899 1820443 - 1820415 - f 100 -17.5 -3.50492 | opp_overlap 1820415 1820415 1820418, overlap 1820418 GACGATAGACGATAA CAAGCCGCTCTTG TTT CAAGGGCGGCTTG TGCGTTATAGTGGTG TERM 1900 1820415 - 1820443 + F 100 -19.7 -2.62024 | opp_overlap 1820415 1820418, overlap 1820415 1820418 GACGATAGACGATAA CAAGCCGCTCTTG TTT CAAGGGCGGCTTG TGCGTTATAGTGGTG TERM 1901 1820440 - 1820418 - f 93 -13.4 -3.88175 | opp_overlap 1820415 1820415 1820418, overlap 1820415 GATAGACGATAACAA GCCGCTCTTG TTT CAAGGGCGGC TTGTGCGTTATAGTG TERM 1902 1820418 - 1820440 + F 100 -15.6 -3.45768 | opp_overlap 1820418 1820415, overlap 1820415 1820415 GATAGACGATAACAA GCCGCTCTTG TTT CAAGGGCGGC TTGTGCGTTATAGTG TERM 1903 1820580 - 1820613 + F 80 -8.7 -4.09243 | overlap 1820602 AACGCAATCCGTCGA GGCCCATCCCGTGGG GAGA CCGGCGGGATGAACC TTTTCACCAGCTATG BAD_1445 1820626 - 1821192 + | hypothetical protein TERM 1904 1821232 - 1821256 + T 95 -10.7 -4.67353 | opp_overlap 1821232 CAGCGCAACGGAAAA GCCCGCAATCG CAA TGATTACGGGC TTTTTAAATACGTGA TERM 1905 1821256 - 1821232 - T 93 -12.2 -4.2803 | opp_overlap 1821232 CAGCGCAACGGAAAA GCCCGCAATC GCAAT GATTACGGGC TTTTTAAATACGTGA BAD_1446 1822083 - 1821301 - | hypothetical protein BAD_1447 1822169 - 1822927 + | transcriptional regulatory protein with low similarity to response regulators TERM 1906 1822945 - 1822963 + F 77 -7.4 -4.32131 | overlap 1822946 TTTTCTTGCGATCAT TCCGTTGA TGT TCGACGGG TTTCGTTTGTTTTCG TERM 1907 1823533 - 1823558 + G 71 -5.4 -4.34402 | gap 1, opp_overlap 1823520, overlap 1823534 1823535 ACCGCGAACGTGGTG TTGGGCAACGC GTTCG GCGT-GCCCGG TTTTCCTGTGGACAC nth 1823137 - 1823802 + | endonuclease III BAD_1449 1823892 - 1825439 + | ABC transporter solute-binding protein valS 1825509 - 1828283 + | valyl-tRNA synthetase TERM 1908 1828297 - 1828308 + T 77 -7.2 -4.36914 | overlap 1828304 GAGTCTCTGAGGTGA GCCG CCAG CGGC TTTTGTAGCGCAGCC TERM 1909 1828379 - 1828342 - T 100 -20 -2.91582 | opp_overlap 1828342, overlap 1828366 CACTTCACCCACATA CGAGGGGCCTTTCCTT TGCATG AAGGAGAGGCCCCTCG TATATCCCGTCACTG TERM 1910 1828342 - 1828379 + T 100 -22.9 -2.89881 | opp_overlap 1828342 1828366 CACTTCACCCACATA CGAGGGGCCTTTCCTTT GCAT GAAGGAGAGGCCCCTCG TATATCCCGTCACTG BAD_1451 1830737 - 1828764 - | hypothetical protein BAD_1452 1831218 - 1830805 - | chorismate mutase BAD_1453 1831743 - 1831267 - | AsnC-type transcriptional regulator TERM 1911 1831401 - 1831435 + g 73 -4.2 -4.69622 | opp_overlap 1831390, overlap 1831404 TGAAGCTGGGCGAAC CGGCGACGGAATCG CAGGACA TGATGCCGTCGATG TTTTTGAGCTTGTCT TERM 1912 1832082 - 1832053 - R 100 -17.9 -3.84825 | CGTACGCATAGGAAA GGGGCTACACGGC GATT GCCATGCAGCCCC TCAAACCTTCAGATT rho 1834127 - 1832115 - | transcription termination factor Rho TERM 1913 1834186 - 1834201 + r 86 -10.4 -4.13282 | opp_overlap 1834182 1834183 CGAATGAAAAGTCCG CCGCGA AACA TCGCGG TTTTCGAACTGTCCT TERM 1914 1834288 - 1834248 - R 73 -8.8 -3.79787 | gap 1, overlap 1834242 CCAGACCAACGCAAA GCGGGCACGCGCGGTCCGC CCGT GCGGTTCGCGCAC-CGCGC AATCGCAATAAAAAT TERM 1915 1834337 - 1834316 - R 100 -12.3 -4.87893 | opp_overlap 1834316 AATCGCAATGAAAAA GCCCATGCC AAAA AGCATGGGC TTGATCAAAGTTACG TERM 1916 1834316 - 1834337 + r 74 -11.6 -3.16742 | opp_overlap 1834316 AATCGCAATGAAAAA GCCCATGC CAAAAA GCATGGGC TTGATCAAAGTTACG BAD_1455 1836050 - 1834461 - | hypothetical protein TERM 1917 1836123 - 1836105 - R 76 -10.3 -3.68619 | overlap 1836109 CCGAAGGTAGGGAAA CGCACAG CGCAC CTGTGCG CATGCACACAAAATC TERM 1918 1836213 - 1836173 - R 100 -15.6 -3.48395 | gap 1, opp_overlap 1836179, overlap 1836179 ATCGCCCTGATAGAA GGAAAACCAGCCGTACGGC TTCC GCCGAA-GACTGGTTTTCC GTAGGTCCGCTACAT TERM 1919 1836207 - 1836179 - R 83 -7.4 -4.53034 | gap 1, opp_overlap 1836179, overlap 1836173 CTGATAGAAGGAAAA CCAGCCGTACGGC TTCC GCCGAA-GACTGG TTTTCCGTAGGTCCG BAD_1456 1837601 - 1836531 - | acetyltransferase TERM 1920 1837832 - 1837776 - R 100 -17.8 -4.93177 | gap 2, opp_overlap 1837784, overlap 1837780 1837784 TAAAAAGCAACAAAA TGCAGAAAGGCGTGCGTTTTTACGAT TCCTCTC ATCGCAAAAACGCACGCCTTTC-G-A TGCCATCAATCAGGC TERM 1921 1837830 - 1837780 - R 100 -26.6 -2.86514 | opp_overlap 1837784, overlap 1837776 1837784 AAGCAACAAAATGCA GAAAGGCGTGCGTTTTTACGAT TCCTCTC ATCGCAAAAACGCACGCCTTTC GATGCCATCAATCAG TERM 1922 1837784 - 1837826 + r 100 -19.4 -3.65902 | opp_overlap 1837780 1837776 1837784 AACAAAATGCAGAAA GGCGTGCGTTTTTACGAT TCCTCTC ATCGCAAAAACGCACGCC TTTCGATGCCATCAA TERM 1923 1837826 - 1837784 - R 100 -21.6 -4.08689 | opp_overlap 1837784, overlap 1837780 1837776 AACAAAATGCAGAAA GGCGTGCGTTTTTACGAT TCCTCTC ATCGCAAAAACGCACGCC TTTCGATGCCATCAA gatB 1839367 - 1837871 - | aspartyl/glutamyl-tRNA amidotransferase subunit B TERM 1924 1838100 - 1838127 + g 70 -12.6 -2.90194 | overlap 1838086 1838110 ACCTCGTCCGGAGTG CCTTCGCCGGCG AGCA CGCCTGCGACGG TCTGCTTGGCGAGCT gatA 1840928 - 1839393 - | aspartyl/glutamyl-tRNA amidotransferase subunit A TERM 1925 1839689 - 1839708 + g 76 -9.2 -4.08692 | overlap 1839705 TGACCGGGCTGGTCG GGCCGACG AGCA CGTCGACC TTTTCGAAGGCCTTC gatC 1841226 - 1840930 - | aspartyl/glutamyl-tRNA amidotransferase subunit C BAD_1460 1842324 - 1841410 - | hypothetical protein BAD_1461 1843082 - 1842411 - | hypothetical protein BAD_1462 1844486 - 1843152 - | hypothetical protein TERM 1926 1845339 - 1845363 + G 79 -15.8 -2.81464 | opp_overlap 1845339 CAACGCAAGAAAAAA GCGCGGAAGA ATTGC TCTTCCGCGC TGTGGTAGGTCATGA TERM 1927 1845363 - 1845339 - g 100 -16.5 -5.5074 | opp_overlap 1845339 CAACGCAAGAAAAAA GCGCGGAAGAA TTG CTCTTCCGCGC TGTGGTAGGTCATGA silP 1844630 - 1845565 + | copper-transporting ATPase clpB 1848286 - 1845569 - | chaperone clpB TERM 1928 1846854 - 1846880 + g 70 -5 -4.4595 | overlap 1846850 1846850 1846855 CCGTTCTTTTCGGCG TCCCAACGCGCT TTC AGCCCGTTGAGC TTTTCGCTTTTGTCG TERM 1929 1847601 - 1847643 + g 76 -9.6 -4.07568 | overlap 1847602 AGGGTGGTCGGCACG TCGCCGGCGACGATGCGCTG CGC CAGGCCTTCGACGACGGCGG TTTTGCCGACGCCAG TERM 1930 1847887 - 1847897 + g 71 -6.8 -4.17762 | TACGCAGCTTATCCG CGGT AAG ACCG TTCTTTTCCAAGATG TERM 1931 1848559 - 1848515 - R 95 -8.5 -4.87037 | gap 1 AATACATACGAAAAA GGCGGG-CAGCAACGTAACG AAATCA CGAAACGTTGCAAACCCGCC TAATCCAAAGTCCGC BAD_1465 1849410 - 1848589 - | 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase TERM 1932 1849463 - 1849486 + r 81 -3.8 -5.16472 | overlap 1849447 CGACATGCGTCGCTT TGCGGACGAT GCCG ATTGCTCGCA TTTTTTACGATTTTT BAD_1466 1850126 - 1849506 - | hypothetical protein TERM 1933 1850345 - 1850310 - R 100 -20.6 -4.77165 | overlap 1850286 TTCGTCACAACAAAA GCGGGTGAACCGTTGA TCGC TCAACGACTCACCCGC CCGAACAAGCCCCGT BAD_1467 1851978 - 1850380 - | cell surface protein fimafimbrial subunit TERM 1934 1851569 - 1851584 + g 82 -9 -4.36914 | opp_overlap 1851555 ATGGCAGCCGTACCG CCGTTG CCTG CAACGG TTTTGTCGGCAACGA BAD_1468 1853346 - 1852141 - | hypothetical protein clfA 1854768 - 1853473 - | truncated clumping factor BAD_1470 1856184 - 1854895 - | sortase-like protein TERM 1935 1856210 - 1856182 - G 74 -6.7 -4.36262 | AGAGGCAGACCAAAA CATGGGTTTCTCC TTC GAACACACCCATG TTCACACCCGCCATA TERM 1936 1856291 - 1856272 - R 71 -8.6 -3.89695 | CCCCTAGAAAGACAA CGGTTTCA GGCA CGAAACCG GCAATTTTGGCACCA TERM 1937 1856470 - 1856455 - R 78 -6.8 -4.57205 | AAAAAGTCAAAGAAA GCGCTC AGAT GAACGC ACGCTCACCGAAAAT BAD_1471 1857277 - 1856459 - | hypothetical protein TERM 1938 1856884 - 1856901 + g 74 -3.3 -4.84642 | overlap 1856885 CGATAGTGTCGACCA CCGGCAG CACT TTGCCGA TTTTATTGCTTTGCA TERM 1939 1857550 - 1857569 + r 83 -8 -4.4017 | opp_overlap 1857550 GGAAAAACCAATAAA TCTGAAAA CTTT TTTTCAGA TTTTATCCCCCTTGC TERM 1940 1857569 - 1857550 - R 83 -8 -4.50686 | opp_overlap 1857550 GGAAAAACCAATAAA TCTGAAAA CTTT TTTTCAGA TTTTATCCCCCTTGC BAD_1472 1857984 - 1857565 - | transposase gluQ 1858272 - 1859513 + | glutamyl-Q tRNA(Asp) synthetase BAD_1474 1860457 - 1859609 - | membrane protein TERM 1941 1860037 - 1860053 + g 79 -9.4 -4.14598 | CCGCGTTGCCGAATT CGTCGG CCGAA CCGACG TTTCCTTTGGTTGCG TERM 1942 1860109 - 1860124 + g 75 -8.2 -4.16842 | overlap 1860099 GTTTGCCGCTGTTTT GCGCGG TTTC CTGCGC TTTGTTCAGAATCGC TERM 1943 1860653 - 1860602 - R 75 -12.5 -2.64616 | CCGCCATGCATACCA CCTA-TGCGTAAGGCCCGTGGTTCC GGAG GGAATCACGGGCCTTAC-CAGCATG CCAGACGAATGCCGG glpF 1861418 - 1860687 - | glycerol uptake facilitator protein TERM 1944 1861599 - 1861577 - R 100 -12 -4.93696 | opp_overlap 1861577 CCGAAATACGAAAAA GACCCAAGTC ATT GGCTTGGGTC TTGTCTGTGCCCCCT TERM 1945 1861577 - 1861599 + r 95 -14.2 -3.58905 | opp_overlap 1861577 CCGAAATACGAAAAA GACCCAAGTC ATT GGCTTGGGTC TTGTCTGTGCCCCCT TERM 1946 1861863 - 1861844 - R 76 -5.6 -4.79223 | overlap 1861846 TCATACGACGAAAAA TGCGGCGC GATG GCGCCATA AAATCCAAGTAATCA TERM 1947 1862088 - 1862070 - R 70 -6.6 -4.14859 | ATCAAGAAGGAGAAA GGCTTACC TAT GGCATGCC CAAATTGCGGTCAGC TERM 1948 1862192 - 1862158 - R 76 -10.7 -3.6502 | CACCGCTCACCCAAA CGACCGCGG-CGGCACC GCA AGCGCCGGCCGCG-CCG GAATCCGATGACGGC BAD_1476 1862531 - 1862142 - | hypothetical protein BAD_1477 1863974 - 1862601 - | hypothetical protein BAD_1478 1864436 - 1864032 - | hypothetical protein TERM 1949 1864104 - 1864138 + g 70 -9.9 -3.49475 | gap 1, opp_overlap 1864093 1864084 AACACGGCAACGGGT GCGGTGCC-GCTGCCG CAAT CGCCAGCAGGCGCGGC TTCTATGCCGGTCGC BAD_1479 1865090 - 1864734 - | amino acid transporter TERM 1950 1865219 - 1865182 - R 100 -19.3 -2.92449 | opp_overlap 1865188, overlap 1865188 TAAAGAGCGGATATA GGAAAATCCCCCGCACC AATC GGTACGGGGGATTTTCG ATGCTTAAGCTCAGA TERM 1951 1865213 - 1865188 - R 100 -16.9 -4.39166 | opp_overlap 1865188, overlap 1865182 GCGGATATAGGAAAA TCCCCCGCACC AATC GGTACGGGGGA TTTTCGATGCTTAAG TERM 1952 1865188 - 1865213 + r 100 -14.7 -4.23892 | opp_overlap 1865188 1865182 GCGGATATAGGAAAA TCCCCCGCACC AATC GGTACGGGGGA TTTTCGATGCTTAAG rplI 1865746 - 1865300 - | 50S ribosomal protein L9 rpsR 1866014 - 1865766 - | 30S ribosomal protein S18 ssb 1866760 - 1866101 - | single-strand DNA-binding protein TERM 1953 1866697 - 1866671 - G 73 -10.8 -3.60627 | opp_overlap 1866664 1866663, overlap 1866672 GGAGGCGATCGTAAA GCTGGCAACGGC GGC GCCGCTGCCAAT GGTACGAATTTCCGG TERM 1954 1866696 - 1866672 - G 77 -14.3 -2.76162 | opp_overlap 1866664 1866663, overlap 1866671 GAGGCGATCGTAAAG CTGGCAACGGC GGC GCCGCTGCCAA TGGTACGAATTTCCG rpsF 1867093 - 1866803 - | 30S ribosomal protein S6 TERM 1955 1867304 - 1867285 - R 100 -15 -4.88407 | opp_overlap 1867285, overlap 1867265 1867262 GGAGGCAAGCAAAAA GCCCCGCT CGCA AGCGGGGC TTAATCGCAAAAAAT TERM 1956 1867285 - 1867304 + r 91 -15 -3.14211 | opp_overlap 1867265 1867262 1867285 GGAGGCAAGCAAAAA GCCCCGCT CGCA AGCGGGGC TTAATCGCAAAAAAT prsA1 1868384 - 1867371 - | ribose-phosphate pyrophosphokinase TERM 1957 1868569 - 1868519 - R 100 -9 -5.27779 | overlap 1868520 GGCAACATCAAAAAA TCCCCAAGCCATCGACACAGAA GGCACAT CTCAACGTCGATGGTTTGGGGG GAAAACCGGATTACC TERM 1958 1868568 - 1868520 - R 86 -12.5 -3.75583 | overlap 1868519 GCAACATCAAAAAAT CCCCAAGCCATCGACACAGAA GGCACAT CTCAACGTCGATGGTTTGGGG GGAAAACCGGATTAC TERM 1959 1868586 - 1868575 - R 74 -7.2 -4.07568 | GGTTTGGGGGGAAAA CCGG ATTA CCGG ACTATTCGGCGGACG rbsK 1869580 - 1868588 - | PfkB family sugar kinase iunH2 1870742 - 1869654 - | putative nucleoside hydrolase protein TERM 1960 1870639 - 1870669 + g 76 -6.7 -4.53119 | gap 1, overlap 1870641 1870658 TCGTTGATTGGCTGT GACGGCCGTTCGCG TCCG CGCG-GCTGCCGCC TTTGTTGTGTTCTTT TERM 1961 1870877 - 1870889 + r 71 -10.5 -3.28712 | opp_overlap 1870866 1870864 1870859 AATACACGCATCGCA CGCGC TAT GCGCG TTATGCGCAAGCGGC rbsR 1871942 - 1870890 - | ribose operon repressor RbsR TERM 1962 1871216 - 1871196 - G 72 -11.1 -3.40403 | opp_overlap 1871195, overlap 1871198 GTCGTTGCAGCAGAA CACGGCGGT CGC ACCGCCGTC GATGATCTGGTCGGC TERM 1963 1871214 - 1871198 - G 81 -13.7 -3.27475 | opp_overlap 1871195, overlap 1871196 CGTTGCAGCAGAACA CGGCGGT CGC ACCGCCG TCGATGATCTGGTCG TERM 1964 1872068 - 1872082 + r 70 -2.8 -4.68593 | TTTCCACCGGTAAAT CGTTTC TCG GAAGTG TTTTTGCATACTCGC TERM 1965 1872206 - 1872167 - R 74 -2.9 -4.89339 | gap 1, overlap 1872170 AACCACGCAGAAAAA CAATGCGA-GACAGCG CAAAACCAT CGCCATCGTCGCAGTG GTCGCAGTGGTCGCC BAD_1488 1872496 - 1872239 - | hypothetical protein BAD_1489 1872840 - 1872493 - | ATPase BAD_1490 1873190 - 1872927 - | transcription regulator protein TERM 1966 1873194 - 1873156 - G 73 -9 -3.86015 | gap 1, opp_overlap 1873158 1873160, overlap 1873160 GACTCCGCGGACAAA GCA-ATGAGGCTTCCCC GTGAGA AGGGAAGCCTCATATTC CATTCATTCTATTCA TERM 1967 1873189 - 1873160 - G 90 -14.4 -3.6053 | opp_overlap 1873160 1873158, overlap 1873156 CCGCGGACAAAGCAA TGAGGCTTCCCC GTGAGA AGGGAAGCCTCA TATTCCATTCATTCT TERM 1968 1873160 - 1873189 + g 78 -13.7 -3.18536 | opp_overlap 1873156 1873160, overlap 1873158 CCGCGGACAAAGCAA TGAGGCTTCCC CGTGAGAA GGGAAGCCTCA TATTCCATTCATTCT BAD_1491 1875305 - 1873227 - | efflux transporter protein BAD_1492 1875420 - 1875605 + | hypothetical protein BAD_1493 1875816 - 1876343 + | hypothetical protein TERM 1969 1876510 - 1876542 + G 72 -11.1 -3.29043 | opp_overlap 1876495 1876490, overlap 1876509 CGAGCACGCTCGTTC CCGCCGTGCTCGGCG GCG TGCTGTACGCGGCGG TTCTAGGACGGGATT accD3 1876379 - 1876768 + | putative acetyl CoA carboxylase beta subunit rmlB1 1877906 - 1876884 - | rhamnose biosynthesis dTDP-glucose 4,6-dehydratase BAD_1496 1879228 - 1878026 - | hypothetical protein TERM 1970 1878744 - 1878727 - G 70 -4.1 -4.64076 | AAGGAAAGCATAAAA GTATTCC AACT GGGATAC GCCATCGCGGCAATG BAD_1497 1880171 - 1882027 + | hypothetical protein BAD_1498 1882093 - 1883136 + | hypothetical protein TERM 1971 1883240 - 1883225 - f 95 -5.4 -5.36441 | overlap 1883228 1883238 GGGCTATACAAAAAA GCATGC AAAA ACATGC ACACCTTGAAAGGTG TERM 1972 1884434 - 1884422 - g 75 -2 -4.93177 | GAAAAACCAAGAAAA TTCT GCACG AGAA GAGGCATATAAGCAA BAD_1499 1883253 - 1884596 + | glycosyl transferase TERM 1973 1884655 - 1884597 - T 100 -21.4 -3.91564 | opp_overlap 1884613, overlap 1884598 CAGAATAATCAATAA TTGTTTGTGTTAATGATGGCCCAGGG GTAACGT CACTGGACCATCATTAACACAAACAT ACATACAATTAATTA TERM 1974 1884654 - 1884598 - T 100 -24.9 -2.93854 | opp_overlap 1884613, overlap 1884597 AGAATAATCAATAAT TGTTTGTGTTAATGATGGCCCAGGG GTAACGT CACTGGACCATCATTAACACAAACA TACATACAATTAATT rgpDc 1885918 - 1884692 - | ATP-driven polysaccharide export protein TERM 1975 1885451 - 1885437 - G 85 -6.4 -4.74504 | ATTGCAACGGAAAAA GCAAGT CGA ACCTGC ATACCTGAAGAATAG TERM 1976 1885456 - 1885474 + g 78 -10.4 -3.97947 | GTCGAACCTGCATAC CTGAAGAA TAG TTCTTCAG TTTCTGATCCATGAA BAD_1501 1886776 - 1885940 - | polysaccharide ABC transporter permease BAD_1502 1886910 - 1888853 + | hypothetical protein BAD_1503 1888850 - 1889917 + | hypothetical protein TERM 1977 1889926 - 1889960 + T 86 -10.9 -4.15543 | gap 1, opp_overlap 1889924 1889920 1889929, overlap 1889929 GTTTTAAAAGTTATA TAAGTGCCCAGAGG TATCCCCT CCTC-GGGCACTTA TTTTAAGCATCTTTC TERM 1978 1889929 - 1889957 + T 77 -8.2 -4.18908 | gap 1, opp_overlap 1889929 1889924 1889920, overlap 1889926 TTAAAAGTTATATAA GTGCCCAGAGG TATCCCCT CCTC-GGGCAC TTATTTTAAGCATCT BAD_1504 1891708 - 1890272 - | hypothetical protein TERM 1979 1891203 - 1891189 - G 72 -2.8 -4.8277 | overlap 1891190 AAATACAAAAAAGAA CCGTAA TAA CTACGA TTGCAATTAATACTG BAD_1505 1892735 - 1891782 - | glycosyltransferase BAD_1506 1893615 - 1892764 - | nucleoside-diphosphate-sugar epimerases-like rmlB1 1893710 - 1894732 + | rhamnose biosynthesis dTDP-glucose 4,6-dehydratase TERM 1980 1894904 - 1894875 - g 85 -9.1 -4.614 | opp_overlap 1894876, overlap 1894870 GCGAAGCAGACAAAA CTGGGCCTGCCCG ATTT CGGGCCGGTGCAG AACAACATCAGCTAC TERM 1981 1895336 - 1895312 - g 88 -7.1 -5.0133 | opp_overlap 1895304, overlap 1895314 GATGGCCCCAAAAAA GACTTTGGTGC TTG GCAGCAAAGGC AAATTGGGACGTGCA TERM 1982 1895334 - 1895314 - g 71 -8.3 -4.13561 | opp_overlap 1895304, overlap 1895312 TGGCCCCAAAAAAGA CTTTGGTGC TTG GCAGCAAAG GCAAATTGGGACGTG rmlCD 1894737 - 1896167 + | fused dTDP-4-keto-L-rhamnose reductase and dTDP-4-keto-6-deoxyglucose-3,5-epimerase enzyme involved in rhamnose biosynthesis BAD_1509 1896164 - 1897066 + | hypothetical protein TERM 1983 1897123 - 1897072 - T 100 -13.2 -5.011 | opp_overlap 1897078, overlap 1897076 ATTGAAATAATAAAA TGCATGTATGAGTGGGGTCCAATT GGAA AATTGGACCCCACTCATATTTTAA AAAATTACAGAGATA TERM 1984 1897119 - 1897076 - T 95 -18.4 -2.89538 | opp_overlap 1897078, overlap 1897072 AAATAATAAAATGCA TGTATGAGTGGGGTCCAATT GGAA AATTGGACCCCACTCATATT TTAAAAAATTACAGA TERM 1985 1897078 - 1897117 + T 100 -25.4 -4.11484 | opp_overlap 1897076 1897072 ATAATAAAATGCATG TATGAGTGGGGTCCAATT GGAA AATTGGACCCCACTCATA TTTTAAAAAATTACA BAD_1510 1898296 - 1897154 - | proline symporter TERM 1986 1897273 - 1897243 - G 85 -6.9 -4.8048 | gap 1, overlap 1897246 TCGTCATATCAAAAA GC-AGCCCCCTTAA TAAA TCAAGGGCGCTTGC AACCACACATACAAT lytC 1900002 - 1898311 - | 1,4-beta-N-acetylmuramidase TERM 1987 1900504 - 1900474 - g 73 -10.5 -3.61922 | AAGATTCATTCCAAA TCGCCATATCGCA AGGCG TGCAAGATGGCGA CACTTGGGTACATAA BAD_1512 1900263 - 1900925 + | putative cell wall-anchored protein TERM 1988 1902143 - 1902133 - g 85 -6.8 -4.75404 | opp_overlap 1902141 AAACGGTACGAAAAA CGCT GTC AGCG TACCTAACGGACCGC BAD_1513 1900922 - 1902577 + | putative sialic acid-specific acetylesterase BAD_1514 1902719 - 1903762 + | hypothetical protein TERM 1989 1903795 - 1903846 + F 100 -20.5 -4.85129 | gap 1, opp_overlap 1903810, overlap 1903798 1903810 1903839 CAGCGTTTGCTTCAT CGACTCATGAAAAAACGGTCTCGA ATATA TCGGGACCGTTTTTTCATGCG-CG TTTTTCGTATGTGCT TERM 1990 1903798 - 1903844 + F 100 -21.9 -2.69273 | opp_overlap 1903810, overlap 1903795 1903810 1903839 CGTTTGCTTCATCGA CTCATGAAAAAACGGTCTCGA ATATA TCGGGACCGTTTTTTCATGCG CGTTTTTCGTATGTG TERM 1991 1903810 - 1903832 + F 100 -11.3 -5.14965 | opp_overlap 1903810, overlap 1903798 1903795 CGACTCATGAAAAAA CGGTCTCGA ATATA TCGGGACCG TTTTTTCATGCGCGT TERM 1992 1903832 - 1903810 - f 100 -9.1 -5.1675 | opp_overlap 1903798 1903795 1903810 CGACTCATGAAAAAA CGGTCTCGA ATATA TCGGGACCG TTTTTTCATGCGCGT TERM 1993 1903928 - 1903958 + F 71 -11 -3.00766 | opp_overlap 1903924 1903927 1903923 CGACGTACAATGCAG CGCGGAGCGCGCGT ACC ATGCGTGAACCGCG TGTATGTCCAGTATT TERM 1994 1904428 - 1904448 + G 84 -3.9 -5.16681 | TCGCCCGTTTGCAAG GCAGACCCA GCT TCGCTCTGC TTTTCTTGTTTTTCC BAD_1515 1904028 - 1904516 + | hypothetical protein TERM 1995 1904966 - 1904924 - f 91 -12.1 -4.19746 | gap 1 CGGAGTGGAAAAGAA GGAACCCCAGAAACCGAATG ATTC CAA-CGGTTTTCGGGGTTCC AATCCGGGCGGAGAA TERM 1996 1905032 - 1905016 - f 71 -10.9 -3.25942 | opp_overlap 1905031 AGGCTGTTACACCAA CACGCTT TCC AAGCGTG CGCCATAGACCACTA BAD_1516 1905330 - 1905941 + | hypothetical protein TERM 1997 1906039 - 1906002 - T 82 -5.3 -5.00895 | overlap 1906003 1906004 GGCATGAGAGAAAAA TGGGGGTTCCCGGAGCG CGAA CCCGACGGGAACCCCGG AAACGAAAAAGGGGC TERM 1998 1906037 - 1906004 - T 72 -12.3 -2.75165 | overlap 1906003 1906002 CATGAGAGAAAAATG GGGGTTCCCGGAGCG CGAA CCCGACGGGAACCCC GGAAACGAAAAAGGG TERM 1999 1906088 - 1906050 - T 100 -17.5 -4.98531 | gap 2, overlap 1906051 CCCGGAAACGAAAAA GGGGCCTCCCGG--GAGCC AAA GGCTCGACCGGGAGGCCCA ACATGTGAAGCGGCG TERM 2000 1906087 - 1906051 - T 100 -21 -3.58396 | gap 2, overlap 1906050 CCGGAAACGAAAAAG GGGCCTCCCGG--GAGCC AAA GGCTCGACCGGGAGGCCC AACATGTGAAGCGGC TERM 2001 1911555 - 1911519 - T 76 -3.2 -5.00196 | gap 2, overlap 1911520 1911523 1911543 CTCGAAATAAGAAAA TTG-ACGAT-CGCCTT ATAAGGA AAGGCGCATCGCACAA AAACCTCGCCGCCGT BAD_1517 1914197 - 1911900 - | transmembrane protein alanine and leucine rich TERM 2002 1913694 - 1913676 - G 71 -8.8 -3.71888 | opp_overlap 1913679 AAGCAGATGGAACAA CGGCGGAT AGT ATCCGTCG TTCGGCCACAGGTGG TERM 2003 1914200 - 1914186 - G 73 -4.2 -4.69027 | overlap 1914195 1914197 AAAGGCATCTAAAAA CGGATG GAA CATGCG CGGGATGGGCGCAAG BAD_1518 1914504 - 1915904 + | ABC transporter permease BAD_1519 1915901 - 1916944 + | ABC transporter ATP-binding protein TERM 2004 1916969 - 1917005 + T 100 -23.9 -5.19212 | opp_overlap 1916969, overlap 1916954 1916951 1916949 1916992 TTCTGCGAGGCGAAA GCCTTGCGGACTGGTGT TGC ATGCCAGTCCGCAAGGC TTTTTTCGTGCTGGT TERM 2005 1917005 - 1916969 - T 100 -19.6 -3.59979 | opp_overlap 1916954 1916951 1916949 1916969 1916992 TTCTGCGAGGCGAAA GCCTTGCGGACTGG TGTTGCATG CCAGTCCGCAAGGC TTTTTTCGTGCTGGT BAD_1520 1918324 - 1917494 - | hypothetical protein BAD_1521 1919432 - 1918563 - | hypothetical protein TERM 2006 1918986 - 1918964 - G 70 -3.4 -4.64676 | TGACGGCGAAGAAAA TGGCGG AATCGGAACGG CCGCCA GTGGACTGCACGATG kup2 1921987 - 1919807 - | potassium transport system protein kup 2 TERM 2007 1921319 - 1921363 + g 76 -7.2 -4.44448 | gap 1, opp_overlap 1921324 1921333 GCGCGACTGCACTGC GAACAGGCAGACGATGATCAC AATG GTGATCATCAGC-GTCAGTTC TTTGTTTCCGCTCAT TERM 2008 1921937 - 1921960 + g 76 -8.9 -4.0342 | gap 1, overlap 1921938 TGGCGCCTGCGTGTA C-GTCGCTGC GTGAA GCAGCGACTG TTCTTCTTCGTTCGG TERM 2009 1921938 - 1921958 + g 82 -12.6 -3.60112 | overlap 1921937 GGCGCCTGCGTGTAC GTCGCTGC GTGAA GCAGCGAC TGTTCTTCTTCGTTC BAD_1523 1923197 - 1922232 - | hypothetical protein TERM 2010 1922856 - 1922870 + g 72 -11.4 -3.37053 | GGGTGCGCCGCGGTG GCCGTG CAG CACGGC TTCGTTGGGGTGTAT TERM 2011 1923223 - 1923264 + r 100 -19.5 -3.54424 | overlap 1923207 ATTGGCCCTGCACTG CGGGCGAACTCTCGTTCGA GGGT TCAAACGAGGGTCCGCCCG TTTCGCGGCATACAC BAD_1524 1925629 - 1923281 - | alpha-arabinofuranosidase I TERM 2012 1924517 - 1924529 + g 74 -5.5 -4.57569 | opp_overlap 1924517 GACGGCGTCGAAAAT CTGCT GGA AGCGG TTTTTGAACACGTCG BAD_1525 1927215 - 1925743 - | alpha-galactosidase TERM 2013 1926733 - 1926762 + g 70 -9.9 -3.53343 | AGTGTGCTCGGTGTC GGCAACGTCCTGC GCAT GCAGCGCGGTGCC TTTGACCGGCAGGTT BAD_1526 1927436 - 1928506 + | LacI-type transcriptional regulator xynD 1928630 - 1929667 + | endo-1,4-beta-xylanase BAD_1528 1932109 - 1929698 - | alpha-galactosidase TERM 2014 1932212 - 1932258 + r 90 -13.1 -3.86346 | gap 1, opp_overlap 1932245 1932249, overlap 1932248 1932249 GCGATGAACTTGACT GGCGC-ATCCTTGGTTTTGGCG ATGT TGCCGAAACCAAGGACAGCCCC TTTGTCGGGCAGTCC BAD_1529 1934457 - 1932292 - | hypothetical protein TERM 2015 1934192 - 1934244 + g 74 -11.4 -3.49851 | overlap 1934232 1934233 TGCGCCGGGTCGTCC GGCAGGG-CTTCGAAGCCGCGGAA CGTGTAT TTCGGCGGCA-CGAAGGCCTTGCC TTCCTTGTGGTGTTC TERM 2016 1934652 - 1934697 + r 100 -18.9 -3.21747 | opp_overlap 1934662 GATATACGGGCTAAG GGGCAGAGCAGCTAGCCGCCG GGGC TGGCGGCCGGCTGCTCAGACC TTGATCATGGCGTAC BAD_1530 1936478 - 1934691 - | ABC transporter BAD_1531 1938385 - 1936493 - | ABC transporter permease TERM 2017 1939082 - 1939058 - g 73 -13.5 -2.78463 | opp_overlap 1939058 1939059 ATGGCGGGTACGATA CGGCCGCGGGA GCG TGCCGCGGCCA TTTGCTCGACCTGTA TERM 2018 1939058 - 1939082 + G 80 -11.3 -3.74251 | opp_overlap 1939058, overlap 1939059 ATGGCGGGTACGATA CGGCCGCGGGA GCG TGCCGCGGCCA TTTGCTCGACCTGTA TERM 2019 1939059 - 1939081 + G 79 -14.8 -2.84229 | opp_overlap 1939058, overlap 1939058 TGGCGGGTACGATAC GGCCGCGGGA GCG TGCCGCGGCC ATTTGCTCGACCTGT lipA 1938589 - 1939890 + | lipase TERM 2020 1939938 - 1939896 - T 72 -12 -2.76815 | opp_overlap 1939901, overlap 1939895 ACGCTGTTGAATAAC GTGAATGGGGTGAATACTCC TTC GGAGTGCCCGCCCCATTCAA TGGCCGTCGATGCCG glcP 1941466 - 1939964 - | D-glucose-proton symporter TERM 2021 1941512 - 1941547 + r 100 -22.1 -3.07994 | opp_overlap 1941512, overlap 1941514 GCAGCAAACAAAAAA GACCTGGAACGACGT ATAGTG ACGTCGTTCCAGGTC TTGCCTCGCATTGAG TERM 2022 1941547 - 1941512 - R 100 -22.1 -5.68438 | opp_overlap 1941512 1941514 GCAGCAAACAAAAAA GACCTGGAACGACGT ATAGTG ACGTCGTTCCAGGTC TTGCCTCGCATTGAG TERM 2023 1941514 - 1941545 + r 100 -18.9 -3.09803 | opp_overlap 1941512, overlap 1941512 AGCAAACAAAAAAGA CCTGGAACGACGT ATAGTG ACGTCGTTCCAGG TCTTGCCTCGCATTG TERM 2024 1941823 - 1941800 - R 100 -12.4 -4.87389 | overlap 1941787 GACGGCAAAAAGAAA GCCGGCGG AGAGAAAG CCGCCGGC TGAGAGAGAAGAGAG BAD_1534 1944506 - 1942140 - | glycosyl hydrolase TERM 2025 1942755 - 1942799 + g 75 -7.8 -4.23213 | gap 1, overlap 1942756 CCGGTAGATCGGGTC GTCCGCGCCGAGCGCCGTGAA ATGT TTGGCGGTG-TCGTCGCGGAA TTTGTTCCATGTGGA TERM 2026 1944699 - 1944755 + r 72 -12.3 -2.57132 | opp_overlap 1944699 1944701, overlap 1944698 GGCAATCAAAACAAA TACCCCCTAACCGCCATTTTCCGGTCA TTT TGACCTAAAAACAGCAGTTAGGGGGCA CTTATCGCACCGCAG TERM 2027 1944755 - 1944699 - R 100 -23.3 -4.78077 | opp_overlap 1944698 1944699, overlap 1944701 GGCAATCAAAACAAA TACCCCCTAACCGCCATTTTCCGGTCA TTT TGACCTAAAAACAGCAGTTAGGGGGCA CTTATCGCACCGCAG TERM 2028 1944753 - 1944701 - R 100 -23.7 -3.99559 | opp_overlap 1944699 1944698, overlap 1944699 CAATCAAAACAAATA CCCCCTAACCGCCATTTTCCGGTCA TTT TGACCTAAAAACAGCAGTTAGGGGG CACTTATCGCACCGC BAD_1535 1946704 - 1944842 - | methionyl-tRNA synthetase TERM 2029 1945708 - 1945737 + g 70 -9.9 -3.54459 | AGGCCACGACCTGCT CCGGCATGTTCAG CGGA CCGAGCTTGCCGG TTTCGCCGCCCTTGG BAD_1536 1946782 - 1947486 + | hypothetical protein BAD_1537 1947483 - 1947983 + | hypothetical protein BAD_1538 1949032 - 1947953 - | hypothetical protein BAD_1539 1950264 - 1949260 - | hypothetical protein TERM 2030 1950218 - 1950263 + g 95 -15.7 -3.74693 | gap 1 TTTTCACGTCTTTTT TGTCGCACGACTTCGCTTTTCG GAC CAAAAAAC-AAGTCGTGCGACA TTTAATCGAGTAAAA TERM 2031 1950326 - 1950280 - R 100 -12.5 -4.77157 | opp_overlap 1950282 TTAATCGAGTAAAAA TACCCCCTAACTGGCATTTTC CGGGC GAAAACGGCACTTAGGAGGTA TTCGGCGTCGCACGA BAD_1540 1951366 - 1950317 - | hypothetical protein TERM 2032 1950433 - 1950403 - G 84 -10.4 -4.1466 | ACCTAATCGCCAAAA TCAGATGGGACGCG ACT CGTGCACCATCTGA CGATCGCCGTAATAC TERM 2033 1950874 - 1950886 + g 100 -9.1 -4.80487 | overlap 1950864 TGCCATGGGCGTCGC GCCGA CCC TCGGC TTTATTTTCCTTATC TERM 2034 1951582 - 1951547 - R 70 -9.8 -3.34062 | opp_overlap 1951546, overlap 1951534 1951542 1951545 1951548 AACGCAAGCACAACA CGCGGAGTGTGGAA TTGCATTT TTCCACACTCCGTA CTAATATTTCGAGAG TERM 2035 1951732 - 1951703 - R 72 -11.4 -3.15544 | opp_overlap 1951703 CGTCAGCTCCACGAA GCCCGCTGCATT CATTCC ACCGCAGCGGGC TTTTTCTTTTGTTTT TERM 2036 1951703 - 1951732 + r 100 -9.3 -5.70761 | opp_overlap 1951703 CGTCAGCTCCACGAA GCCCGCTGC ATTCATTCCACC GCAGCGGGC TTTTTCTTTTGTTTT BAD_1541 1952455 - 1951787 - | hypothetical protein TERM 2037 1952780 - 1952748 - g 100 -24.3 -3.30006 | overlap 1952738 ACCAACCCATAGCAA CGGAGGCACTTGGGA ATC CCCCAAGTGCCTCCG CAACGAAAAACACAT BAD_1542 1952699 - 1952848 + | hypothetical protein BAD_1543 1953210 - 1952845 - | hypothetical protein TERM 2038 1953333 - 1953378 + r 87 -2.1 -5.63857 | gap 1, opp_overlap 1953342, overlap 1953337 1953342 TTATGAGTAGTTGCA TACCAAAAATCGGGCATA CCCCCGCGATA TATGCCCGATTT-TGCTG TTTTTTTAGATTTTT TERM 2039 1953342 - 1953370 + r 75 -6.1 -4.66395 | opp_overlap 1953342, overlap 1953337 1953333 GTTGCATACCAAAAA TCGGGCATA CCCCCGCGATA TATGCCCGA TTTTGCTGTTTTTTT TERM 2040 1953370 - 1953342 - R 100 -10.3 -4.8048 | opp_overlap 1953342 1953337 1953333 GTTGCATACCAAAAA TCGGGCATACCCC CGC GATATATGCCCGA TTTTGCTGTTTTTTT BAD_1544 1954046 - 1953438 - | MerR-type-transcriptional regulator TERM 2041 1953760 - 1953802 + g 83 -16.9 -2.53876 | opp_overlap 1953760 1953783, overlap 1953765 TGCGCTTGCGCAAGA CGGGAGATGTCGCGCAGCG AATAG CGCCGCGCGCCACCTTCCG TACGTTGCGGTACAA TERM 2042 1953802 - 1953760 - G 90 -19.1 -3.01712 | opp_overlap 1953760 1953765, overlap 1953783 TGCGCTTGCGCAAGA CGGGAGATGTCGCGCAGCG AATAG CGCCGCGCGCCACCTTCCG TACGTTGCGGTACAA TERM 2043 1953935 - 1953894 - G 72 -11.6 -3.36878 | overlap 1953916 CGCACCGACCGAGAA GACGG-GCAGCTCGATGTCG AAAC CGACTTCG-GCGGCACCGTC CAGGTCGGCCCGGCC BAD_1545 1955077 - 1954052 - | chaperone protein DnaJ TERM 2044 1954381 - 1954406 + g 76 -5.4 -4.58283 | TCGGGTCTTCGGCGA CGGTGATATG CAGGTA CAGATCGCCG TTTTTGCCGCCATTG TERM 2045 1955197 - 1955174 - R 74 -11 -3.19192 | opp_overlap 1955170 1955169 TTTCAGGTAATCGAA GGCCCCTC GTTTTTCA GAGGGGCC CGATTACTCGTCACA grpE 1955920 - 1955252 - | protein grpE (HSP-70 cofactor) dnaK 1957803 - 1955923 - | molecular chaperone DnaK TERM 2046 1958044 - 1957997 - R 100 -28 -4.08692 | gap 1, opp_overlap 1958004, overlap 1958004 CAACTTTGCGCAAAA CCCAAAACCGCCGGCGCTGGAGA GTA TCT-CAGCGGCGGCGGTTTTGGG GATCATCGGAGGTTA TERM 2047 1958004 - 1958037 + r 100 -17.5 -4.12188 | gap 1, opp_overlap 1957997 1958004 GCGCAAAACCCAAAA CCGCCGGCGCTGGAGA GTA TCT-CAGCGGCGGCGG TTTTGGGGATCATCG TERM 2048 1958037 - 1958004 - R 100 -17.5 -4.4267 | gap 1, opp_overlap 1958004, overlap 1957997 GCGCAAAACCCAAAA CCGCCGGCGCTGGAGA GTA TCT-CAGCGGCGGCGG TTTTGGGGATCATCG BAD_1548 1960168 - 1958069 - | alkaline phosphatase TERM 2049 1959961 - 1959989 + g 80 -3.2 -5.07486 | gap 1 AATCGCCCATGCCGT CGCCGATGAAC AGCACCAC GTTC-TTGGCG TTTTTGTTGCCGATG BAD_1549 1961532 - 1960654 - | hypothetical protein BAD_1550 1961699 - 1962211 + | hypothetical protein BAD_1551 1963313 - 1962450 - | sortase family protein can 1964517 - 1963444 - | collagen adhesin precursor TERM 2050 1964266 - 1964321 + g 73 -4.8 -4.70583 | gap 2, opp_overlap 1964280, overlap 1964308 1964309 TTTGTAGAGGTTGAA GCT-GGCGTCCGAAA-TGGCGAAGTT GGTAGA ATCGTCGCCAGTTTCGGAGTCCGAGC TTTTATGTTGGTACG TERM 2051 1964750 - 1964724 - H 74 -10.8 -3.53091 | overlap 1964727 AGCGGGCGCGCGAAA GCACGCGACCGG ATG CCGATCGCATTC CCGAATAGTGCTGTG TERM 2052 1964747 - 1964727 - H 71 -11.1 -2.90496 | overlap 1964724 GGGCGCGCGAAAGCA CGCGACCGG ATG CCGATCGCA TTCCCGAATAGTGCT BAD_1553 1965054 - 1965371 + | putative diguanylate cyclase TERM 2053 1965401 - 1965356 - f 100 -6.3 -5.52384 | gap 1 TGCGGAGCAAAAAAA TGTGTCACGATCCTGATTTTCG CCG CAAATTTC-GAATCATGACACA TCCAGATGCCGAAAA BAD_1554 1965489 - 1965686 + | hypothetical protein BAD_1555 1966072 - 1965641 - | putative death on curing protein BAD_1556 1967781 - 1966753 - | LacI-type transcriptional regulator TERM 2054 1967840 - 1967821 - R 74 -7.2 -4.11281 | overlap 1967822 1967839 CATCATAATCACAAA CGTTTCCA ACCT TGGAAACA CTCGCTTGAGCGGTG BAD_1557 1968750 - 1967902 - | putative ABC transport system membrane protein BAD_1558 1969662 - 1968880 - | haloacid dehalogenase-like hydrolase pulA 1971457 - 1969760 - | pullulanase precursor TERM 2055 1971709 - 1971668 - H 93 -13.9 -3.90744 | gap 1, opp_overlap 1971681 GCCCCGTTGAAATAA TCGTTTGCAATGCGGA-GCG CTG CGCCTTCGTATTGCAAACGA TAGTCAATATGAAAA malQ 1971927 - 1974095 + | 4-alpha-glucanotransferase TERM 2056 1974167 - 1974130 - T 87 -15.7 -2.91276 | opp_overlap 1974135, overlap 1974135 CCTTTCCTTACAAAC CAAAATTCCGGTCCTCC TTGT GGAGGGCCGGAATTTTT CATATATGCAAGGCG TERM 2057 1974162 - 1974135 - T 100 -15.6 -4.61873 | opp_overlap 1974135, overlap 1974130 CCTTACAAACCAAAA TTCCGGTCCTCC TTGT GGAGGGCCGGAA TTTTTCATATATGCA TERM 2058 1974135 - 1974162 + T 100 -17.8 -4.84527 | opp_overlap 1974135 1974130 CCTTACAAACCAAAA TTCCGGTCCTCC TTGT GGAGGGCCGGAA TTTTTCATATATGCA aglA 1976006 - 1974258 - | alpha-1,4-glucosidase TERM 2059 1976574 - 1976623 + G 70 -3.6 -4.66938 | TTCGAATGGGTGTGG GCGTTGC-AGGCGCGGTTCGAGAA CTCG TTCTGGCGCA-CGCTTGGCAACGC TTTTGTGTTCGGCGT BAD_1562 1976220 - 1976822 + | hypothetical protein TERM 2060 1976833 - 1976864 + T 77 -4.4 -4.87665 | opp_overlap 1976838, overlap 1976834 1976838 AGTAATTAGGCACGA AAAAAGGGACTGAT TCGC ATCAGTCCCTTAAA TTTTTCTGGGTGAAA TERM 2061 1976859 - 1976838 - T 100 -13.1 -5.1675 | opp_overlap 1976834 1976833 1976838 TTAGGCACGAAAAAA GGGACTGAT TCGC ATCAGTCCC TTAAATTTTTCTGGG TERM 2062 1976838 - 1976859 + T 85 -13.1 -3.49077 | opp_overlap 1976838, overlap 1976834 1976833 TTAGGCACGAAAAAA GGGACTGAT TCGC ATCAGTCCC TTAAATTTTTCTGGG TERM 2063 1976936 - 1976922 - T 76 -12.8 -2.84098 | overlap 1976882 1976919 CCCTGCAATTAAGGA CCGCGC TAC GCGCGG GCTCAACGTTACCCT TERM 2064 1976985 - 1976999 + T 72 -11.4 -3.05816 | opp_overlap 1976987, overlap 1976987 GCTGGAGCCTGGGAA CAGCGC ACT GCGCTG TTCCCTAAGGGCTGA BAD_1563 1977864 - 1977022 - | ABC transporter permease BAD_1564 1978778 - 1977861 - | ABC transporter permease BAD_1565 1979080 - 1980093 + | LacI-type transcriptional regulator TERM 2065 1980126 - 1980175 + T 100 -31.1 -2.78384 | opp_overlap 1980128 1980130 1980134, overlap 1980128 1980130 1980134 GCGAACGTAGCGACA TACACGAAGGGCCGTCATCGCAA GTAA TTACGATGACGGCCCTTCGTGTA TGTCGTCACAACCAA TERM 2066 1980128 - 1980173 + T 100 -29.3 -2.94099 | opp_overlap 1980128 1980130 1980134, overlap 1980126 1980130 1980134 GAACGTAGCGACATA CACGAAGGGCCGTCATCGCAA GTAA TTACGATGACGGCCCTTCGTG TATGTCGTCACAACC TERM 2067 1980173 - 1980128 - T 100 -31.5 -2.92389 | opp_overlap 1980128 1980126 1980130 1980134, overlap 1980130 1980134 GAACGTAGCGACATA CACGAAGGGCCGTCATCGCAA GTAA TTACGATGACGGCCCTTCGTG TATGTCGTCACAACC TERM 2068 1980130 - 1980171 + T 100 -26.1 -3.02471 | opp_overlap 1980128 1980130 1980134, overlap 1980128 1980126 1980134 ACGTAGCGACATACA CGAAGGGCCGTCATCGCAA GTAA TTACGATGACGGCCCTTCG TGTATGTCGTCACAA TERM 2069 1980171 - 1980130 - T 100 -28.3 -3.01119 | opp_overlap 1980130 1980128 1980126 1980134, overlap 1980128 1980134 ACGTAGCGACATACA CGAAGGGCCGTCATCGCAA GTAA TTACGATGACGGCCCTTCG TGTATGTCGTCACAA TERM 2070 1980167 - 1980134 - T 100 -21.9 -3.35465 | opp_overlap 1980130 1980128 1980126 1980134, overlap 1980130 1980128 AGCGACATACACGAA GGGCCGTCATCGCAA GTAA TTACGATGACGGCCC TTCGTGTATGTCGTC TERM 2071 1980134 - 1980167 + T 100 -19.7 -3.35912 | opp_overlap 1980134 1980130 1980128, overlap 1980130 1980128 1980126 AGCGACATACACGAA GGGCCGTCATCGCAA GTAA TTACGATGACGGCCC TTCGTGTATGTCGTC TERM 2072 1980234 - 1980187 - T 83 -12.8 -3.29511 | opp_overlap 1980188 1980191, overlap 1980188 1980191 TGTATGTCGTCACAA CCAACTGCGGCCGAGAGA AGGAAAGGAAAA ACTCTCGGCCGCAGTTGT TCTATTCAGTTATTG TERM 2073 1980233 - 1980188 - T 89 -16.3 -2.57564 | opp_overlap 1980188 1980191, overlap 1980187 1980191 GTATGTCGTCACAAC CAACTGCGGCCGAGAGA AGGAAAGGAAAA ACTCTCGGCCGCAGTTG TTCTATTCAGTTATT TERM 2074 1980188 - 1980233 + T 100 -16.3 -3.73359 | opp_overlap 1980188 1980187 1980191, overlap 1980191 GTATGTCGTCACAAC CAACTGCGGCCGAGAGA AGGAAAGGAAAA ACTCTCGGCCGCAGTTG TTCTATTCAGTTATT TERM 2075 1980230 - 1980191 - T 80 -12.2 -3.44146 | opp_overlap 1980188 1980191, overlap 1980188 1980187 TGTCGTCACAACCAA CTGCGGCCGAGAGA AGGAAAGGAAAA ACTCTCGGCCGCAG TTGTTCTATTCAGTT TERM 2076 1980191 - 1980230 + T 90 -12.2 -3.98114 | opp_overlap 1980191 1980188 1980187, overlap 1980188 TGTCGTCACAACCAA CTGCGGCCGAGAGA AGGAAAGGAAAA ACTCTCGGCCGCAG TTGTTCTATTCAGTT BAD_1566 1981667 - 1980267 - | ABC transporter solute-binding protein TERM 2077 1981886 - 1981864 - R 76 -10.5 -3.70307 | opp_overlap 1981863, overlap 1981862 TGCATGCAATAAAGA GGCGGTTCC AAGGA GGGACCGCC ATAATATTCAGCGAT BAD_1567 1982629 - 1981925 - | hypothetical protein TERM 2078 1982647 - 1982657 + H 74 -6.8 -4.28361 | CTCTACTCTAGCCGA CGCA AGC TGCG TTTTCATCCCATTCC TERM 2079 1982946 - 1982926 - H 71 -4.6 -4.63218 | gap 1, overlap 1982927 1982928 TGGTGTGGAAGAAAA GCGTCGGCC GCAA GGCCGTC-C GTGCCGACGGTACCA BAD_1568 1983213 - 1983992 + | NADPH-flavin oxidoreductase TERM 2080 1984075 - 1984035 - f 100 -16.3 -3.52459 | gap 1, opp_overlap 1984036 1984037, overlap 1984037 1984040 ACGAAGCTGATACAA CACAAGGCCCGGTGGATT GCAATG AATCCGCCGGGCCTTG-G TTTTATATGTTGCCT TERM 2081 1984036 - 1984075 + F 100 -18.7 -4.68545 | opp_overlap 1984035 1984037 1984040, overlap 1984037 CGAAGCTGATACAAC ACAAGGCCCGGTGGATT GCAATG AATCCGCCGGGCCTTGG TTTTATATGTTGCCT TERM 2082 1984074 - 1984037 - f 100 -20 -3.33412 | opp_overlap 1984036 1984037, overlap 1984035 1984040 GAAGCTGATACAACA CAAGGCCCGGTGGATT GCAATG AATCCGCCGGGCCTTG GTTTTATATGTTGCC TERM 2083 1984037 - 1984074 + F 100 -22.2 -3.40043 | opp_overlap 1984037 1984035 1984040, overlap 1984036 GAAGCTGATACAACA CAAGGCCCGGTGGATT GCAATG AATCCGCCGGGCCTTG GTTTTATATGTTGCC TERM 2084 1984071 - 1984040 - f 100 -15.9 -3.79874 | opp_overlap 1984037 1984036, overlap 1984037 1984035 GCTGATACAACACAA GGCCCGGTGGATT GCAATG AATCCGCCGGGCC TTGGTTTTATATGTT TERM 2085 1984146 - 1984158 + F 70 -9.1 -3.62224 | CTATTACCTTCTGCG GGGCT TGT AGCCC TTCTTGCGGGAATGT TERM 2086 1984488 - 1984453 - f 85 -4.7 -5.28176 | gap 2, overlap 1984454 TTCAGGGATAAAAAA TGGGGTTTCCG--GAGC GTAA GCTCGACGGGAACCCCG GAAACGAAAAGGGGC TERM 2087 1984537 - 1984499 - f 100 -17.5 -4.54727 | gap 2, overlap 1984500 CCCCGGAAACGAAAA GGGGCCTCCCGG--GAGCC AAA GGCTCGACCGGGAGGCCCA ACATGTGAAGCGGCG TERM 2088 1984536 - 1984500 - f 100 -21 -3.32354 | gap 2, overlap 1984499 CCCGGAAACGAAAAG GGGCCTCCCGG--GAGCC AAA GGCTCGACCGGGAGGCCC AACATGTGAAGCGGC BAD_1569 1990545 - 1991201 + | Sir2-type regulatory protein TERM 2089 1991253 - 1991216 - T 76 -10.1 -3.83006 | opp_overlap 1991220, overlap 1991220 ACACCGAATGAACAA GCAAGGCTCCTC-AACC TGATTG GGTTTGAGGAGCCTT-C TTTGATGCGGAAGAT TERM 2090 1991220 - 1991250 + T 93 -12.7 -4.00042 | gap 1, opp_overlap 1991216 1991220 CGAATGAACAAGCAA GGCTCCTCAA-CCT GATT GGGTTTGAGGAGCC TTCTTTGATGCGGAA TERM 2091 1991250 - 1991220 - T 81 -12 -3.58329 | gap 1, opp_overlap 1991220, overlap 1991216 CGAATGAACAAGCAA GGCTCCTC-AACC TGATTG GGTTTGAGGAGCC TTCTTTGATGCGGAA tdcB 1992567 - 1991302 - | threonine dehydratase TERM 2092 1992546 - 1992556 + g 70 -3.2 -4.67982 | CGCGCCGCAATGCTT TGAG CAC CTCG TTTTGTTCCATGGAC TERM 2093 1992723 - 1992676 - R 95 -17.9 -2.66106 | opp_overlap 1992683, overlap 1992683 CATCGCAAGAAGGTA GTAAAAATGCCCGAGTGGTTC CGTGAT GAGCCACTCGGGCATTTCTGC AGAGAGTTATAGGGA TERM 2094 1992683 - 1992716 + r 100 -19 -3.86194 | opp_overlap 1992676 1992683 AGAAGGTAGTAAAAA TGCCCGAGTGGTTC CGTGAT GAGCCACTCGGGCA TTTCTGCAGAGAGTT TERM 2095 1992716 - 1992683 - R 100 -16.8 -4.77759 | opp_overlap 1992683, overlap 1992676 AGAAGGTAGTAAAAA TGCCCGAGTGGTTC CGTGAT GAGCCACTCGGGCA TTTCTGCAGAGAGTT agl 1994567 - 1992747 - | oligo-1,6-glucosidase TERM 2096 1993526 - 1993551 + g 70 -3.1 -4.62069 | overlap 1993527 TCCTCACGGCCTCCT GCTGCTCGGTC ATAC GGTCGCGCAGG TTTTTGACCTCGAAC TERM 2097 1993851 - 1993863 + g 71 -9.1 -3.8211 | GGATCCTGCCTCCCC CGGCA ACT TGCCG TTCTTGTCGATGACC TERM 2098 1994771 - 1994734 - R 100 -14.3 -4.36931 | overlap 1994752 CAATGCATACGAAAA GCGGGAATCCTCG AAAAAGGGGAAA CGAGGATTCCCGC TCGGCGCTGTGAAGT TERM 2099 1994887 - 1994865 - R 83 -15 -2.57795 | opp_overlap 1994869, overlap 1994861 1994869 CTCAGGAGGAACCTA TGAACAGTCC ACA GGACTGTTCA CTTCACGGCTCCTCT msmG 1995775 - 1994885 - | sugar permease of ABC transporter system msmF 1996726 - 1995794 - | sugar permease of ABC transporter system msmE 1998033 - 1996741 - | sugar binding protein of ABC transporter system TERM 2100 1998505 - 1998482 - g 80 -3.8 -5.01553 | gap 1, overlap 1998484 1998489 AATCCAGAAAGAAAA TACGGAACGTC GCG GCCGT-CCGCA GACCGGACTGCGCAT BAD_1575 1998219 - 1999445 + | NagC/XylR-type transcriptional regulator aga 2001812 - 1999518 - | alpha-galactosidase TERM 2101 2000293 - 2000315 + g 71 -5.4 -4.35483 | overlap 2000291 2000295 GGACGTCCGGTGCGC GGCGACACCG CTT CGGTGACGTA TTTGTTGTGATCCCA TERM 2102 2000295 - 2000313 + g 76 -10.2 -3.78004 | overlap 2000291 2000293 ACGTCCGGTGCGCGG CGACACCG CTT CGGTGACG TATTTGTTGTGATCC TERM 2103 2001737 - 2001724 - G 77 -8.1 -4.38774 | overlap 2001713 AACACCAGAGCAAAA GCTGC GGCG GCAGC CGGCTGCTCGGCATA TERM 2104 2001883 - 2001896 + r 70 -3.1 -4.78326 | gap 1 TACCGCTTTTCTTCC CATCGC CCT GCG-TG TTTGTTTCTTTCGGA mesJ 2002391 - 2001918 - | cytidine and deoxycytidylate deaminase BAD_1578 2002511 - 2004631 + | NhaP-type Na(+)/H(+) exchanger TERM 2105 2004910 - 2004937 + F 91 -9.7 -4.61482 | overlap 2004912 TTCTCTCTCCTTTCT CTCCCCGGCGG CCAATC CCGCCGGGGTC TTCTTTTTTCGCCGC TERM 2106 2004912 - 2004935 + F 100 -16.7 -3.91465 | overlap 2004910 CTCTCTCCTTTCTCT CCCCGGCGG CCAATC CCGCCGGGG TCTTCTTTTTTCGCC BAD_1579 2005062 - 2005841 + | phospholipase/carboxylesterase dcd 2006457 - 2005876 - | deoxycytidine triphosphate deaminase TERM 2107 2006524 - 2006498 - R 83 -15.1 -2.6381 | opp_overlap 2006494, overlap 2006488 2006487 ACAATCGTCATATGA GCGGGCGCGCA GCCAA CGCGCGCCCAC CAACTGTCGTCCAGT BAD_1581 2009641 - 2006567 - | calcium-transporting ATPase TERM 2108 2008255 - 2008283 + g 82 -12.4 -3.59979 | opp_overlap 2008228 CGTTCCGCACGGTTT CGACGGCGGTCT CGCGA AGCTCGCCGTCG TTTGCGATCGCGCCC TERM 2109 2008629 - 2008600 - G 72 -11.4 -3.31792 | gap 1 GCACGACTGTCAGAA TCGCGGC-GAGCC CTTCC GGCACGGCCGCGA CGGCCAGCGAAACGG TERM 2110 2008933 - 2008952 + g 70 -4.2 -4.56775 | overlap 2008928 2008935 CACCCAAGGCCTTGG CTTCGGCA AGTG TGTCGACG TTTTTGCCGACCGGT BAD_1582 2009997 - 2013146 + | beta-galactosidase TERM 2111 2013228 - 2013195 - f 72 -12.3 -2.57344 | opp_overlap 2013196 2013197, overlap 2013194 GATTCGCGGCATAAT TCCGGCCGACTTGCC AATA GGCAGGCCGGCCGAT TCTGTTGATGGCTGA TERM 2112 2013196 - 2013227 + F 89 -13.6 -3.71998 | opp_overlap 2013195 2013194, overlap 2013197 ATTCGCGGCATAATT CCGGCCGACTTGCC AATA GGCAGGCCGGCCGA TTCTGTTGATGGCTG TERM 2113 2013197 - 2013226 + F 91 -17.1 -2.82717 | opp_overlap 2013195 2013194, overlap 2013196 TTCGCGGCATAATTC CGGCCGACTTGCC AATA GGCAGGCCGGCCG ATTCTGTTGATGGCT BAD_1583 2013325 - 2014182 + | hypothetical protein TERM 2114 2014234 - 2014186 - f 72 -11.9 -2.74286 | overlap 2014176 AAGAAGCGCTAACTA CG-CGTAGTTCTCCCGTATAGGC GATAA ACCCATACGGGAGAACG-CGACG TGCCGTACGATTGAC BAD_1584 2014343 - 2015374 + | LacI family transcriptional regulator BAD_1585 2015629 - 2016936 + | putative solute-binding lipoprotein TERM 2115 2017006 - 2016975 - f 100 -18 -3.68222 | opp_overlap 2016972 2016971 TTCCAACTCCAATAA TGGTGCGGCCCGTC TTCG GGCGGACCGCACCA ACCCTTTCCTCCCCC BAD_1586 2017117 - 2018052 + | ABC transporter membrane component TERM 2116 2018175 - 2018163 - g 73 -4.8 -4.63486 | overlap 2018164 2018165 2018167 AGGCCTCGAAGAAAA CGCA GCACG TGCG TTCCGCAGGTGACTG malG4 2018114 - 2018992 + | sugar permeases TERM 2117 2019083 - 2019035 - f 75 -3.8 -4.8384 | gap 2, opp_overlap 2019044 2019047, overlap 2019037 2019044 GAAATAACGCAAAAA CAGATACAACCGGCCGCGGCGGCT TTC AGC-ACCGTAGCCGGCATTATC-G ACGCGCCCACTGCAA TERM 2118 2019082 - 2019037 - f 71 -7.5 -4.01369 | gap 1, opp_overlap 2019044 2019047, overlap 2019035 2019044 AATAACGCAAAAACA GATACAACCGGCCGCGGCGGCT TTC AGC-ACCGTAGCCGGCATTATC GACGCGCCCACTGCA TERM 2119 2019075 - 2019044 - f 80 -10.8 -3.78699 | gap 1, opp_overlap 2019044 2019047, overlap 2019037 2019035 CAAAAACAGATACAA CCGGCCGCGGCGGCT TTC AGC-ACCGTAGCCGG CATTATCGACGCGCC TERM 2120 2019509 - 2019537 + G 71 -5.7 -4.35483 | opp_overlap 2019510, overlap 2019505 2019510 TGGGATGGCGAGGAG ACGCCGTCCGTGC AGT GCCCGATCGGCGA TTTCTTCTGCTGCGG TERM 2121 2019918 - 2019897 - g 71 -7.3 -4.28432 | AAGGCGAAGTCAAAA TGTACATCG ACGG CGATGAACA GTACCCGACGTGGTG BAD_1588 2019179 - 2020309 + | hypothetical protein BAD_1589 2020954 - 2020415 - | regulatory protein TERM 2122 2020943 - 2020892 - G 100 -18 -3.55444 | opp_overlap 2020899, overlap 2020893 TTCCGATTTTTTAAA TCGCATAGCGGGAGGCCGCGATCC AACC GAATCGCGGCCTCCCGCTTTTTCA TACGCGCACATGCAC TERM 2123 2020943 - 2020893 - G 88 -19.1 -2.73124 | gap 1, opp_overlap 2020899, overlap 2020892 TCCGATTTTTTAAAT CG-CATAGCGGGAGGCCGCGATCC AACC GAATCGCGGCCTCCCGCTTTTTCA TACGCGCACATGCAC TERM 2124 2020899 - 2020936 + g 100 -27.1 -4.72272 | opp_overlap 2020892 2020893 TTTTTAAATCGCATA GCGGGAGGCCGCGATCC AACC GAATCGCGGCCTCCCGC TTTTTCATACGCGCA BAD_1590 2022438 - 2021152 - | putative transport protein TERM 2125 2022541 - 2022520 - g 90 -5.7 -5.27477 | overlap 2022521 2022523 ATGGCAATGAAAAAA GGACCGACC AAGG GGTCGGGCG GAAAGCATCGTAACG TERM 2126 2022540 - 2022521 - g 71 -9.2 -3.75402 | overlap 2022520 2022523 TGGCAATGAAAAAAG GACCGACC AAGG GGTCGGGC GGAAAGCATCGTAAC TERM 2127 2022538 - 2022523 - g 70 -10.4 -3.44982 | overlap 2022521 2022520 GCAATGAAAAAAGGA CCGACC AAGG GGTCGG GCGGAAAGCATCGTA BAD_1591 2022511 - 2023500 + | tRNA/rRNA methyltransferase protein TERM 2128 2023556 - 2023528 - T 100 -16.2 -4.17296 | opp_overlap 2023528, overlap 2023531 TGCGATACATACAAA GAAGCTCAAGCT TTTCC AGCTTGAGCTTC TTTTGTTTTCCTGAG TERM 2129 2023528 - 2023556 + T 100 -16.2 -5.13722 | opp_overlap 2023528 2023531 TGCGATACATACAAA GAAGCTCAAGCT TTTCC AGCTTGAGCTTC TTTTGTTTTCCTGAG TERM 2130 2023553 - 2023531 - T 91 -12.1 -4.2028 | opp_overlap 2023528, overlap 2023528 GATACATACAAAGAA GCTCAAGCT TTTCC AGCTTGAGC TTCTTTTGTTTTCCT BAD_1592 2025036 - 2023624 - | hypothetical protein TERM 2131 2025146 - 2025117 - R 100 -18.7 -4.14874 | opp_overlap 2025122, overlap 2025108 2025122 AGAACAGCGGGAAAA GAAAAGCCCCGCA CCAA CGCGGGGCTTTTC CAACGAGACAATAAG TERM 2132 2025141 - 2025122 - R 100 -12.8 -5.08255 | opp_overlap 2025122, overlap 2025108 2025117 AGCGGGAAAAGAAAA GCCCCGCA CCAA CGCGGGGC TTTTCCAACGAGACA TERM 2133 2025122 - 2025141 + r 91 -12.1 -4.07568 | opp_overlap 2025108 2025122 2025117 AGCGGGAAAAGAAAA GCCCCGC ACCAAC GCGGGGC TTTTCCAACGAGACA TERM 2134 2025228 - 2025267 + r 78 -12 -3.31188 | opp_overlap 2025219 2025231, overlap 2025220 2025232 CAAGTATTGGTTCAA CCACCCGCCAAGCGTTCC ATAA GGAACGCCCGACGGTTGG TTACTCGTTATCGTC TERM 2135 2025264 - 2025231 - R 76 -13.1 -2.71364 | opp_overlap 2025228 2025220 2025232, overlap 2025219 GTATTGGTTCAACCA CCCGCCAAGCGTTCC ATAA GGAACGCCCGACGGT TGGTTACTCGTTATC TERM 2136 2025232 - 2025263 + r 70 -10 -3.43553 | opp_overlap 2025231 2025219, overlap 2025228 2025220 TATTGGTTCAACCAC CCGCCAAGCGTTCC ATAA GGAACGCCCGACGG TTGGTTACTCGTTAT msiK 2026410 - 2025283 - | ATP binding protein of ABC transporter for sugars TERM 2137 2026450 - 2026464 + H 76 -2.8 -5.10461 | overlap 2026434 GTACGTGCCTCACGA TCCGTT GTA AAGGGA TTTTTGTTCGGTGCC virR 2026701 - 2027456 + | two-component response regulator virS 2027453 - 2028793 + | two-component sensor histidine kinase BAD_1596 2030129 - 2028819 - | hypothetical protein TERM 2138 2030983 - 2030950 - R 100 -12.5 -4.4296 | GAACAGATATGAAAA GCCCGTCCAGG GAAAAGGGAAGA CCTGGACGGGC ACAAGGAAGGGAAGA BAD_1597 2031591 - 2031016 - | PTS system cellobiose-specific IIC component BAD_1598 2034019 - 2031584 - | putative glycosyl hydrolase TERM 2139 2033933 - 2033987 + g 76 -9.5 -4.09685 | opp_overlap 2033921 GAAGCCGGGAATGTC GGCG-CGATCGTTG-CCGCGCGAATCC CATTC GGATCCGC-CGGACAGC-ATCGCCGCC TTTTCAACGATCGAA TERM 2140 2034729 - 2034694 - H 76 -9.7 -3.81428 | overlap 2034695 ATCAAGTAATTCAAA CGGGACCGTACCGTC GCATAT GATGACACGGTCCCA ATCCAGTTCTCCCGA TERM 2141 2034728 - 2034695 - H 71 -11 -2.88134 | overlap 2034694 TCAAGTAATTCAAAC GGGACCGTACCGTC GCATAT GATGACACGGTCCC AATCCAGTTCTCCCG TERM 2142 2034875 - 2034890 + G 73 -10.4 -3.62096 | overlap 2034885 GCATCGGCCTCATCA CGGACG CGCT CGTCCG TTTCGAATGGTCCGA TERM 2143 2036268 - 2036250 - g 77 -14.6 -2.75481 | GTTCAACGGCAAGGA GCCGTGGA ACT TCCACGGC GATGCGGAACGTGCG xylS 2034772 - 2037297 + | alpha-xylosidase TERM 2144 2037319 - 2037369 + F 100 -27 -4.52857 | opp_overlap 2037319 2037324, overlap 2037324 CGCAATAATTCAAAA TAAAACGCGTGCGCGTCCGGATGG TTT CCGCCCGGACGCACACGCGTTTTG TTTTATGTACGAAAT TERM 2145 2037369 - 2037319 - f 100 -27 -4.36127 | opp_overlap 2037319 2037324, overlap 2037324 CGCAATAATTCAAAA TAAAACGCGTGCGCGTCCGGATGG TTT CCGCCCGGACGCACACGCGTTTTG TTTTATGTACGAAAT TERM 2146 2037364 - 2037324 - f 100 -26.9 -5.13343 | opp_overlap 2037319 2037324, overlap 2037319 TAATTCAAAATAAAA CGCGTGCGCGTCCGGATGG TTT CCGCCCGGACGCACACGCG TTTTGTTTTATGTAC TERM 2147 2037324 - 2037364 + F 100 -24.7 -5.23292 | opp_overlap 2037324 2037319, overlap 2037319 TAATTCAAAATAAAA CGCGTGCGCGTCCGGATGG TTT CCGCCCGGACGCACACGCG TTTTGTTTTATGTAC TERM 2148 2037654 - 2037678 + F 100 -15.7 -3.96452 | overlap 2037655 TAAAGCTCAATCTTT CGGGCGGTAGC AGT GCTACCGCCCA TTTACGTTTTCATTC TERM 2149 2037655 - 2037677 + F 100 -19.2 -2.96787 | overlap 2037654 AAAGCTCAATCTTTC GGGCGGTAGC AGT GCTACCGCCC ATTTACGTTTTCATT TERM 2150 2038155 - 2038127 - g 73 -13.8 -2.70932 | overlap 2038107 GCCCGGGCGGAACGA GCCGATCGAGCC GGGGA GGCGCGACCGGC GGTTGGAGATGGAGG BAD_1600 2037786 - 2038220 + | transposase BAD_1601 2038323 - 2038742 + | putative endonuclease/exonuclease/phosphatase family protein TERM 2151 2038760 - 2038792 + F 72 -11.2 -3.10474 | opp_overlap 2038760, overlap 2038753 2038752 2038749 GACGTCCAGGAAACA GGGGTTTGCCGGCC GGAAG GGTCCGCAGGCCCC TCTTCCCGTATTCTG nagA 2038826 - 2040073 + | N-acetylglucosamine-6-phosphate deacetylase TERM 2152 2040915 - 2040885 - g 74 -6 -4.5265 | overlap 2040887 AATCACACCAGAAAA GCCGTTGACCACGA ATT TCATGGTCTCCGCC GGCGGTTCCGTACTG BAD_1603 2040109 - 2042187 + | beta-galactosidase TERM 2153 2042242 - 2042199 - T 100 -19.8 -3.15758 | opp_overlap 2042202, overlap 2042189 2042202 ATAATGGCTCATTAA TGAGGCGATATGCCATGTGA ACGT TCACATGGCATATCGCCTTT CTTACGACAGATGGC TERM 2154 2042202 - 2042239 + T 100 -25.9 -4.15222 | opp_overlap 2042189 2042199 2042202 ATGGCTCATTAATGA GGCGATATGCCATGTGA ACGT TCACATGGCATATCGCC TTTCTTACGACAGAT TERM 2155 2042239 - 2042202 - T 100 -25.9 -2.78018 | opp_overlap 2042202, overlap 2042189 2042199 ATGGCTCATTAATGA GGCGATATGCCATGTGA ACGT TCACATGGCATATCGCC TTTCTTACGACAGAT TERM 2156 2042247 - 2042264 + T 74 -4.9 -4.79826 | gap 1 ATATCGCCTTTCTTA CGACAGAT GGC ATC-GTCG TTTTTGATGATATGT TERM 2157 2042414 - 2042404 - T 70 -5.4 -4.43859 | opp_overlap 2042353 GAGAATGCCACAAAA GGAT AAT ATCC AGTAGACCGCTAACG TERM 2158 2042806 - 2042776 - T 100 -17.8 -3.02511 | opp_overlap 2042776 GTCATTCTTTCAAGA TTTTTTAGGCGAGG ATT CCCCGCCTAAAAAA TCTTGAAATCGCAGG TERM 2159 2042776 - 2042806 + T 93 -15.6 -3.05844 | opp_overlap 2042776 GTCATTCTTTCAAGA TTTTTTAGGCGAGG ATT CCCCGCCTAAAAAA TCTTGAAATCGCAGG TERM 2160 2043173 - 2043199 + T 84 -8.8 -4.2461 | opp_overlap 2043173 TAAGTCATCAGTTAA GCGTTGTGTG ACAATTC CATACAACGC TTTCTTCATCGCCGT TERM 2161 2043438 - 2043385 - T 100 -16.5 -3.65827 | gap 3 CAATGCGCATCGAAA CATATCCCGTCAGGACCTTCTGCTGT GAGGG ACA-C-GAAGGTC-TGACGGGATATG CCGGATCCGTTAAGG TERM 2162 2043978 - 2044027 + T 100 -20.3 -4.07568 | gap 1, opp_overlap 2043983, overlap 2043983 GCCGGGGTTGAAAAG AAAAAGGTGCCGCACCATTATTCC CAC GGAATC-TGGTGCGGCACCTTTTC TTTTGAAAGGAAACA TERM 2163 2044022 - 2043983 - T 100 -20.2 -5.45802 | gap 1, opp_overlap 2043978 2043983 GGTTGAAAAGAAAAA GGTGCCGCACCATTATTCC CAC GGAATC-TGGTGCGGCACC TTTTCTTTTGAAAGG TERM 2164 2043983 - 2044022 + T 100 -20.2 -5.07652 | gap 1, opp_overlap 2043983, overlap 2043978 GGTTGAAAAGAAAAA GGTGCCGCACCATTATTCC CAC GGAATC-TGGTGCGGCACC TTTTCTTTTGAAAGG TERM 2165 2044404 - 2044370 - T 100 -28.8 -4.10164 | opp_overlap 2044374 2044377 TTACCATCACATAAA CCAAGAAGGCCCCGAC ATG GTCGGGGCCTTCTTGG TGAAAAAGGGAAGGA TERM 2166 2044374 - 2044400 + T 100 -22.4 -3.14132 | opp_overlap 2044370, overlap 2044377 CATCACATAAACCAA GAAGGCCCCGAC ATG GTCGGGGCCTTC TTGGTGAAAAAGGGA TERM 2167 2044377 - 2044397 + T 100 -18.3 -3.71848 | opp_overlap 2044370, overlap 2044374 CACATAAACCAAGAA GGCCCCGAC ATG GTCGGGGCC TTCTTGGTGAAAAAG lacS 2045963 - 2044437 - | galactoside symporter TERM 2168 2045923 - 2045944 + g 73 -10.1 -3.65036 | overlap 2045924 2045930 2045932 CCGAGCTTGCCCTTC TTGCGGACG CCAC CGTCCGCGG TTGTCGTTTCGTTGC BAD_1605 2046289 - 2049360 + | beta-galactosidase TERM 2169 2049590 - 2049640 + T 100 -32.9 -4.44667 | opp_overlap 2049590 CTCACAGATGTAAAA GGGTTCGGTCCTCGTTGGCACGT ATTAA GCGTGTCAACGAGGACCGAACCC TTTCTTCTTAAACCC TERM 2170 2049640 - 2049590 - T 100 -30 -4.26188 | opp_overlap 2049590 CTCACAGATGTAAAA GGGTTCGGTCCTCGTTGGCACG TATTAAG CGTGTCAACGAGGACCGAACCC TTTCTTCTTAAACCC BAD_1606 2050674 - 2049655 - | LacI-type transcriptional regulator BAD_1607 2050756 - 2051250 + | transcriptional regulator TERM 2171 2051414 - 2051402 - g 74 -4.1 -4.86001 | AGGATGCGATAAAAA CGTTC CTC AAACG CAATCCCGACACCTG BAD_1608 2051275 - 2051709 + | acetyltransferase TERM 2172 2051918 - 2051934 + T 75 -6.5 -4.52857 | overlap 2051912 CGGCGATGTGGTCAT CGCTGAC CTT GTCATCG TTTTCTCTGAAACAT BAD_1609 2053574 - 2052315 - | hypothetical protein TERM 2173 2052482 - 2052448 - G 76 -9.2 -4.07885 | overlap 2052449 CATTCCTCGTCAAAA TCTGCAGGCACGAGCT GGA AGCTCTTGCCCGCATC CGGCCAGATCCAATG TERM 2174 2052481 - 2052449 - G 72 -12.7 -3.04517 | overlap 2052448 ATTCCTCGTCAAAAT CTGCAGGCACGAGCT GGA AGCTCTTGCCCGCAT CCGGCCAGATCCAAT TERM 2175 2054398 - 2054358 - R 95 -17.8 -2.99947 | gap 1, opp_overlap 2054358 TAAGCGTCAGACAGA CGTTGGCGGACGACCTATA AAAG CAT-GGTCATCCGCCAACG TTATTCAAGAAGGAA TERM 2176 2054358 - 2054398 + r 95 -14.9 -3.61398 | gap 1, opp_overlap 2054358 TAAGCGTCAGACAGA CGTTGGCGGACGACCTAT AAAAGC AT-GGTCATCCGCCAACG TTATTCAAGAAGGAA BAD_1610 2056887 - 2054437 - | beta-glucosidase TERM 2177 2057075 - 2057049 - R 88 -10 -4.43208 | overlap 2057050 AGAGTTTTAAATAAA GGGGCCTCCTGG GGG CCGGAAGGCCCG GCCGGGAGACAGGTC TERM 2178 2057074 - 2057050 - R 87 -13.5 -3.25202 | overlap 2057049 GAGTTTTAAATAAAG GGGCCTCCTGG GGG CCGGAAGGCCC GGCCGGGAGACAGGT TERM 2179 2057149 - 2057111 - R 100 -17.5 -5.34555 | gap 2, overlap 2057112 GGAGAGGATAAAAAA GGGGCCTCCCGG--GAGCC AAA GGCTCGACCGGGAGGCCCA ACATGTGAAGCGGCG TERM 2180 2057148 - 2057112 - R 100 -21 -3.79649 | gap 2, overlap 2057111 GAGAGGATAAAAAAG GGGCCTCCCGG--GAGCC AAA GGCTCGACCGGGAGGCCC AACATGTGAAGCGGC TERM 2181 2060950 - 2060930 - R 73 -8.9 -3.82824 | overlap 2060931 2060933 CAGCATCCACAACAA CGACGCCGA CTG CCGGCGTCC ATGTGGCTCACACTG TERM 2182 2060949 - 2060931 - R 75 -12.4 -2.89212 | overlap 2060930 2060933 AGCATCCACAACAAC GACGCCGA CTG CCGGCGTC CATGTGGCTCACACT TERM 2183 2063126 - 2063184 + r 80 -9.7 -3.97102 | gap 2, opp_overlap 2063139, overlap 2063139 ATCCGAACGAAGGCA ATGAGATGCAAAAGCCGGGAGGCTCCATG TTC CACGGAGACTCCCGGCTTG-GTAT-TCAA TTATTGGTTTTCAGT TERM 2184 2063139 - 2063173 + r 100 -20 -3.39931 | opp_overlap 2063139, overlap 2063126 CAATGAGATGCAAAA GCCGGGAGGCTCCATG TTC CACGGAGACTCCCGGC TTGGTATTCAATTAT TERM 2185 2063173 - 2063139 - R 100 -22.2 -4.26019 | opp_overlap 2063139 2063126 CAATGAGATGCAAAA GCCGGGAGGCTCCATG TTC CACGGAGACTCCCGGC TTGGTATTCAATTAT BAD_1611 2065924 - 2063210 - | beta-glucosidase-related glycosidase TERM 2186 2067272 - 2067286 + G 78 -7 -4.67982 | AGCGGATGGCGATAC GGAGGC GAT GCCCCC TTTTGTTGAATCGCC TERM 2187 2068231 - 2068277 + G 76 -13.1 -3.30124 | gap 2, opp_overlap 2068258 CGATTCCGATGCCGA CGCTGCTTG-G-CGGTCCGCTTT CCG AAAGCGGGCTGGCGCAGGCTGCG TTCTGCGCGATCGGC BAD_1612 2066277 - 2068433 + | hypothetical protein BAD_1613 2068469 - 2069473 + | hypothetical protein TERM 2188 2069777 - 2069808 + F 100 -11.6 -5.63236 | CTATCTCGTCCGACC GGGGGCAGGACA TCCCCTTC TCTCCTGCCCCC TTTTTATTTTTCGCT BAD_1614 2069941 - 2071461 + | hypothetical protein ksgA 2071513 - 2072424 + | dimethyladenosine transferase ispE 2072421 - 2073347 + | 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase BAD_1617 2073409 - 2074041 + | hypothetical protein TERM 2189 2074104 - 2074077 - T 100 -16.3 -4.88228 | opp_overlap 2074077 AGGCAATATGAAAAA CCCGCGCTCCC CCAATC GGGAACGCGGG TTTTCGTATTCGAGC TERM 2190 2074077 - 2074104 + T 100 -14.1 -4.4261 | opp_overlap 2074077 AGGCAATATGAAAAA CCCGCGCTCCC CCAATC GGGAACGCGGG TTTTCGTATTCGAGC pcnA 2075576 - 2074158 - | RNA nucleotidyltransferase TERM 2191 2076043 - 2076033 - gH 91 -8.2 -4.72846 | overlap 2076034 2076040 2076041 GGACATATCGAAAAA GGCG AAA CGCC GCAGCAGACGGCCGT BAD_1619 2075688 - 2076338 + | hypothetical protein TERM 2192 2076394 - 2076427 + GF 93 -13.9 -3.78934 | overlap 2076400 TCGCGCGTTATCATC CATCCTCGCCATGGT ATTG ACCATGGCGTTGATG TTGTTATACGCACCC TERM 2193 2076400 - 2076421 + GF 95 -14.5 -3.48696 | overlap 2076394 GTTATCATCCATCCT CGCCATGGT ATTG ACCATGGCG TTGATGTTGTTATAC TERM 2194 2077460 - 2077446 - gf 72 -11.4 -3.04461 | opp_overlap 2077444 2077446 TACGTACCGGCAAGA CGGTGG TCT CCACCG ATGTCGGGGACATCA TERM 2195 2077588 - 2077600 + GF 71 -10.5 -3.30124 | ATTGGCGCGATTCGT CGCGC AAA GCGCG TTCTACCAGATGGAA BAD_1620 2076302 - 2078461 + | hypothetical protein TERM 2196 2079545 - 2079584 + G 73 -10.7 -3.57263 | gap 2, overlap 2079567 TGCTGCCGTCCATCA GCGTGCGTGAGGCGCTGCT CATC AGCA-CGCCGCTCGC-CGC TTTGGGCATCGGCCT BAD_1621 2078458 - 2080197 + | hypothetical protein TERM 2197 2080325 - 2080358 + G 75 -2.9 -4.91109 | opp_overlap 2080329 TTGCAGGTTTGGAAG GCAAGCGATCACGTG CTTG CCCGGGATTGCCAGC TTTTTATCGTCAACA TERM 2198 2081111 - 2081097 - g 70 -10 -3.53563 | ATACGCTGGCTGAAA CCGGAA GCA TTCCGG AAATGACGTTCGAAG TERM 2199 2081497 - 2081473 - g 76 -6.9 -4.51777 | ATATCAGAACGAAAA CGGAGCCCCCG TTG CGGTGCCGCCG AGCTTTGCCCCTAAA BAD_1622 2080238 - 2082265 + | hypothetical protein TERM 2200 2082312 - 2082281 - f 100 -18.8 -3.49475 | opp_overlap 2082282, overlap 2082282 2082284 CGCATCGGCAGACAA GGAGGGTGTGCGGA TTGT TCCGCACACCCTCT TTTTGTTTCACGTGA TERM 2201 2082282 - 2082311 + F 100 -22.3 -5.28942 | opp_overlap 2082281 2082282 2082284 GCATCGGCAGACAAG GAGGGTGTGCGGA TTGT TCCGCACACCCTC TTTTTGTTTCACGTG TERM 2202 2082311 - 2082282 - f 100 -22.3 -2.69471 | opp_overlap 2082282, overlap 2082281 2082284 GCATCGGCAGACAAG GAGGGTGTGCGGA TTGT TCCGCACACCCTC TTTTTGTTTCACGTG TERM 2203 2082309 - 2082284 - f 100 -19.1 -2.89 | opp_overlap 2082282, overlap 2082282 2082281 ATCGGCAGACAAGGA GGGTGTGCGGA TTGT TCCGCACACCC TCTTTTTGTTTCACG TERM 2204 2082505 - 2082563 + G 78 -13.2 -3.14132 | gap 3 CTGCCGCGATCTATC TTGGCCGCGCCGGCTTCGAGC-CGCTGGT CGTC GCCGGCGCGCT-GACGCCCG-GCGGCCAG TTGGTCAACACCACC TERM 2205 2082745 - 2082727 - g 79 -8.8 -4.25283 | ATTCCGGCATCAAAA CCGTCACC CTT GACGACGG CGACGTGTACGACGC TERM 2206 2083118 - 2083094 - g 76 -12.1 -3.29461 | GAACGGCGTGCAGAA GGTGGAGGTGC GCA ACACCGCCACC GAAAAGACCTCTGTA TERM 2207 2083304 - 2083357 + G 93 -15.4 -3.55368 | gap 3 GGATAGCGTCTATCG GCAGGC-CATC-AGCGCGGCG-GGCAT GGG GTGCCGCGCCGCGCTGGATGCGCAGGC TTATCTCGATTCGCT trxB 2082438 - 2083379 + | thioredoxin reductase parB 2084720 - 2083434 - | chromosome partitioning protein parA 2085667 - 2084723 - | chromosome partitioning protein ParA TERM 2208 2085181 - 2085209 + g 77 -11.8 -3.61398 | AATCGTAATGCTCTT CGCTGGTGG-CGAG GAA CTCGTCCACC-GCG TTCTTCAGCAGCGAG gidB 2086695 - 2085946 - | glucose-inhibited division protein B TERM 2209 2086706 - 2086740 + r 85 -12.8 -3.60296 | opp_overlap 2086712, overlap 2086712 CTAATCTACAGGCAT CAAAAAGCGCCGCGAG AAA CTCGCGACGCTTCATG TTTCACGTGAAACTA TERM 2210 2086734 - 2086712 - R 100 -17 -4.76041 | opp_overlap 2086706 2086712 TACAGGCATCAAAAA GCGCCGCGAG AAA CTCGCGACGC TTCATGTTTCACGTG TERM 2211 2086712 - 2086734 + r 95 -14.8 -3.46285 | opp_overlap 2086712, overlap 2086706 TACAGGCATCAAAAA GCGCCGCGAG AAA CTCGCGACGC TTCATGTTTCACGTG jag 2087285 - 2086758 - | hypothetical protein TERM 2212 2087389 - 2087440 + r 81 -8 -4.37348 | opp_overlap 2087394 2087396, overlap 2087387 2087396 2087396 GCGATTCGCCCGATA CAAAAGCGGTGTGTCCTGCGTTTC ACGT GAAACACAGGACACACACTTGATG TTATTTCTTCTTCTT TERM 2213 2087434 - 2087394 - R 100 -16.4 -4.52589 | gap 1, opp_overlap 2087389 2087387 2087396 2087396, overlap 2087396 TCGCCCGATACAAAA GCGGTGTGTCCTGCGTTTC ACGT GAAACACAGGACACA-CAC TTGATGTTATTTCTT TERM 2214 2087433 - 2087396 - R 95 -17.9 -2.58418 | opp_overlap 2087389 2087387 2087396 2087396, overlap 2087394 GCCCGATACAAAAGC GGTGTGTCCTGCGTTTC ACGT GAAACACAGGACACACA CTTGATGTTATTTCT TERM 2215 2087396 - 2087433 + r 85 -15.7 -2.70213 | opp_overlap 2087396 2087394, overlap 2087389 2087387 2087396 GCCCGATACAAAAGC GGTGTGTCCTGCGTTTC ACGT GAAACACAGGACACACA CTTGATGTTATTTCT TERM 2216 2087396 - 2087434 + r 100 -15.5 -3.53066 | gap 1, opp_overlap 2087396 2087394, overlap 2087396 2087389 2087387 GCCCGATACAAAAGC G-GTGTGTCCTGCGTTTC ACGT GAAACACAGGACACACAC TTGATGTTATTTCTT oxaA 2088478 - 2087441 - | membrane protein oxaA BAD_1629 2088783 - 2088478 - | hypothetical protein TERM 2217 2088672 - 2088654 - G 71 -8.8 -3.77953 | GTAATAACGCAAGAA GGCCACCT TTA AGGCAGCC AAATCGTTCAATCGC rnpA 2089172 - 2088807 - | ribonuclease P protein component TERM 2218 2089068 - 2089103 + g 100 -20.7 -3.31263 | opp_overlap 2089072 TGTATCGCCCGTTAC GACATCGTCGTGCAT CAGATA ATGCACGACGATGTC TTCTCGCGATACCCT TERM 2219 2089099 - 2089072 - G 77 -15 -2.78384 | opp_overlap 2089068 TCGCCCGTTACGACA TCGTCGTGCATC AGAT AATGCACGACGA TGTCTTCTCGCGATA rpmH 2089375 - 2089193 - | 50S ribosomal protein L34