TransTermHP v2.07 (built on Jan 21 2009) 25 bins; sample size is 20000000 --pval-conf=/fs/szasmg2/carlk/TTupdate2/expterm.dat --gc=-2.3 --au=-0.9 --gu=1.3 --mm=3.5 --gap=6 --max-len=59 --min-stem=4 --max-loop=13 --min-loop=3 --uwin-length=6 --uwin-require=3 --max-hp-score=-2 --max-tail-score=-2.5 --loop-penalty=1,2,3,4,5,6,7,8,9,10,11 --start-cut=0 --end-cut=25 Genes: 0.337834 %AT, 6220043 nt, 55943 terms. Intergenic: 0.380412 %AT, H2T: 768539 nt, 7612 terms; T2T: 261411 nt, 5091 terms; H2H: 343814 nt, 6168 terms. Each terminator entry starts in column 3 and is of the form: term # start - end +/- regionconf hp tail | notes Followed by the sequence of the 5' tail, 5' stem, loop, 3' stem, and 3' tail. Genes are interspersed, and start the first column. SEQUENCE gi|146337175|ref|NC_009445.1| Bradyrhizobium sp. ORS278, complete genome (length 7456587) dnaA 936 - 2366 + | chromosomal replication initiation protein TERM 1 2377 - 2411 + F 70 -10 -3.61398 | gap 2, opp_overlap 2368, overlap 2376 ACTAGACGCGCTCTC GCGG--GGGCGCGGAC AGAAG GTCCGCCCCCAGCCGC TTGTTCCCGCCACCG TERM 2 2579 - 2564 - f 76 -6 -4.59773 | opp_overlap 2541 CTGGACGCTGAAAAA GCGGCC GTTC GGGCGC GAGGTGTCATCGGCC dnaN 2659 - 3777 + | DNA polymerase III subunit beta TERM 3 3861 - 3812 - f 100 -17.2 -3.56643 | gap 1, opp_overlap 3810, overlap 3842 TGTAGAGTGGGCAAA GCGCAG-CGTGCCCACCACCT CCAACTAAC AGGCGGCGGGCACGGCGGCGC CATTGCTCAGCCCGA recF 3998 - 5134 + | recombination protein F gyrB 5434 - 7872 + | DNA gyrase subunit B TERM 4 8135 - 8111 - g 82 -12.8 -3.9461 | CTCCGGCAACAAGAA CGCGGCGCTG CCGAT CATCGCCGCG GCGCTGCTGACGGAC murA 8037 - 9332 + | UDP-N-acetylglucosamine 1-carboxyvinyltransferase BRADO0006 9479 - 9958 + | hypothetical protein BRADO0007 10891 - 10145 - | hypothetical protein TERM 5 10977 - 11005 + r 70 -10.2 -3.53811 | ACTCGCAGATCCGAG CTCGCAGATCCG CTCGC CGGGCCTGCGGG TTTCGCCACGATGAC BRADO0008 11854 - 11087 - | LuxR family transcriptional regulator TERM 6 12146 - 12164 + H 75 -11.6 -3.53811 | overlap 12099 12137 CTCGATGGTGGGCAC GCGCCGCC TTT GGCGTCGC TTTGCCCACCCTACC BRADO0009 12876 - 14252 + | putative MATE efflux family protein; putative multidrug resistance protein norM (multidrug-efflux transporter) BRADO0010 15397 - 14255 - | hypothetical protein BRADO0011 15509 - 16879 + | putative MmgE/PrpD family protein BRADO0012 18294 - 16888 - | putative Beta-lactamase family protein; putative 6-aminohexanoate-dimer hydrolase TERM 7 17257 - 17220 - G 72 -14 -2.98823 | CGTCGTCGAGATACA GCTGGCCGAGCCGCGC CCAGTC GCGCGCCGAGGCCAGC ATCTGGCTCGAGCCC TERM 8 17390 - 17360 - G 73 -14.6 -2.80994 | GCGAAGCGCAGCACA TCCGCAGCGCTGCC GCC GGCGGCGTCGCGGA TGAGCTGCGAGAGGA BRADO0013 19512 - 18436 - | AraC family transcriptional regulator TERM 9 18922 - 18868 - G 100 -19.9 -3.53012 | gap 1, opp_overlap 18914, overlap 18870 18871 CGCCTCCGGGGCAAA CA-GGTCGCCGGCGCCGACCCGCAAC AGCA GCAGCGCGACGGCGCCGGCGACGGTG AGGAACATCGCTGCA TERM 10 18919 - 18870 - G 100 -22.7 -3.34398 | opp_overlap 18914, overlap 18868 18871 CCTCCGGGGCAAACA GGTCGCCGGCGCCGACCCGCAAC AGCA GCAGCGCGACGGCGCCGGCGACG GTGAGGAACATCGCT TERM 11 18918 - 18871 - G 100 -26.2 -2.60496 | opp_overlap 18914, overlap 18870 18868 CTCCGGGGCAAACAG GTCGCCGGCGCCGACCCGCAAC AGCA GCAGCGCGACGGCGCCGGCGAC GGTGAGGAACATCGC TERM 12 20170 - 20211 + G 74 -15.9 -2.63102 | overlap 20154 20200 20203 GCTTCTCCGCGCGGG TCATCGCCGGCAAGGCCTT TGGA AAGGCTTCGCCGGTGACGA TGGTGTCGCCGTGGT BRADO0014 19653 - 20570 + | putative Pirin family protein TERM 13 20577 - 20591 + F 73 -11.4 -3.54424 | CCGGAATAGGCTATG GGGAGC GAC GCTCCC TTTCGAAGGCTCGAC BRADO0015 20610 - 21524 + | phosphoribosylaminoimidazole-succinocarboxamide synthase TERM 14 22261 - 22273 + T 72 -7.7 -4.21438 | opp_overlap 22254 GCCCAAATCTCGCCT TTGCG AAC CGCAA TTGTTTGTTCCGCTA BRADO0017 23206 - 22286 - | LysR family transcriptional regulator BRADO0018 23302 - 24057 + | putative short-chain dehydrogenases/reductases (SDR) family protein BRADO0019 24176 - 24550 + | hypothetical protein TERM 15 24653 - 24711 + T 100 -25.3 -2.73619 | gap 1, overlap 24654 24704 GAGACGTGCTAGCGG -TGGCGCCGTGCCCACCGTCTCGCGGCG AGCA CGCGGCGCGACGGTGGGCACGCTGCCGC CTTTGGCGGCTGCTT TERM 16 24654 - 24712 + T 100 -24 -3.56836 | gap 3, overlap 24653 24704 AGACGTGCTAGCGGT GGC-GC--CGTGCCCACCGTCTCGCGGCG AGCA CGCGGCGCGACGGTGGGCACGCTGCCGCC TTTGGCGGCTGCTTT TERM 17 24704 - 24724 + T 81 -13.9 -3.53811 | overlap 24653 24654 CGCGACGGTGGGCAC GCTGCCGCC TTT GGCGGCTGC TTTGCCCACCCTACG BRADO0020 25438 - 24761 - | putative nitroreductase family protein BRADO0021 26207 - 25530 - | putative haloacid dehalogenase-like hydrolase family protein; putative phosphoglycolate phosphatase BRADO0022 27095 - 26298 - | putative aspartate/ornithine carbamoyltransferase family protein BRADO0023 27293 - 28381 + | putative mandelate racemase/muconate lactonizing family protein BRADO0024 29039 - 28410 - | putative glutathione S-transferase BRADO0025 29783 - 29163 - | hypothetical protein BRADO0026 29960 - 32164 + | sulfate transporter BRADO0027 32262 - 32903 + | hypothetical protein gabD 34415 - 32922 - | succinate-semialdehyde dehydrogenase [NADP+] (SSDH) BRADO0029 34895 - 34575 - | hypothetical protein BRADO0030 35238 - 36431 + | putative beta-lactamase BRADO0031 37745 - 36744 - | adenosine kinase TERM 18 38482 - 38496 + G 74 -12.8 -3.61398 | overlap 38491 CGGATCTCGATGGAT GCCGCG ATG CGCGGC TTCTTCGCCCGCGCG BRADO0032 37816 - 39390 + | putative virulence factor MviN-like protein trpS 39440 - 40492 + | tryptophanyl-tRNA synthetase TERM 19 40517 - 40563 + F 88 -17.4 -3.09516 | opp_overlap 40517 GCCCGGATGAGCGAA GCGACATCCGGGTTCACACG AACTGCA TGCTTGAACCCGGATGTCGC TTCGCTCATCCGGGC TERM 20 40563 - 40517 - f 91 -18.9 -3.09516 | opp_overlap 40517 GCCCGGATGAGCGAA GCGACATCCGGGTTCACAC GAACTGCAT GCTTGAACCCGGATGTCGC TTCGCTCATCCGGGC BRADO0034 40714 - 41208 + | hypothetical protein BRADO0035 41317 - 41886 + | putative nifU protein (C-terminal fragment) BRADO0036 43842 - 42160 - | methyl-accepting chemotaxis protein TERM 21 43991 - 44001 + H 78 -4.6 -4.77036 | CTGCCTGCTGGTTGC CGCG TGA TGCG TTTTTCCTGATCAGG TERM 22 44669 - 44717 + G 78 -13.8 -3.58726 | CGATATCATGTGGGT CGCCTG-GCTCGGCGCGGCGGCGG ATC CTGCCCTCGCGCC-AGCACGGCCG TTCTATCTGCGCGCG BRADO0037 44094 - 44795 + | putative glycoprotease family protein TERM 23 44994 - 45023 + G 72 -4.3 -4.4715 | gap 1, opp_overlap 44982, overlap 44982 TCATTGGCTTCATCG TCTCGCGCATCG GTGCCGA CGAGGC-CGAGA TTTTGTCGGTTGCGC TERM 24 45170 - 45151 - g 71 -9.2 -3.84674 | opp_overlap 45154 45155, overlap 45152 45154 AGTCGAGGAGAACAA CCAGCCGG CGCG CCGGCTGT ATGAACGCGCCGGTT BRADO0038 44792 - 45274 + | putative ribosomal-protein-alanine acetyltransferase, RimI-like protein BRADO0039 45318 - 45770 + | ferric uptake regulator family protein BRADO0040 45763 - 46482 + | putative haloacid dehalogenase-like hydrolase; putative phosphatase TERM 25 47002 - 46977 - g 71 -14.7 -2.64155 | gap 1, opp_overlap 46967, overlap 46973 46974 TCCTCGCCAAACCCA GCCGCGAG-GCG ATA CGCGCCCGCGGC GTGTCGGCTTTCGTC BRADO0041 46538 - 47941 + | putative MiaB-like tRNA modifying enzyme TERM 26 48254 - 48270 + G 78 -15.1 -3.28791 | GCAAGGCGACGTCGA CGGCGCG ATC CGCGCCG TTGTCGCGCAGGGCT BRADO0042 47946 - 48983 + | putative phosphate starvation-inducible protein, PhoH-like protein BRADO0043 49011 - 49553 + | putative metal-dependent hydrolase BRADO0044 49550 - 50749 + | transporter lnt 50746 - 52356 + | apolipoprotein N-acyltransferase TERM 27 52750 - 52730 - g 84 -6.8 -4.8269 | CAGAAGTACGAAAAA GGCACCAA TCGAG TCGGCGCC AGCCGGATCCAGCAG BRADO0046 52589 - 53011 + | putative transcriptional regulatory protein HTH type TERM 28 53143 - 53114 - f 76 -10.7 -3.77196 | CCATGAGCGAGCAAA GCCTTGCGGAAGG ATCA CATTCCGCAATGC CAATGATCCGATAGA TERM 29 53171 - 53225 + F 74 -6 -4.39426 | opp_overlap 53162 53182, overlap 53172 53176 53177 AGACAAGTTCGATCA CGACCATTAGAGCGCGATGGC--TTCCC TTC GGGAAACGCTGTCGCGCTCTAA-G-TCA TTTTGTGCGCATGTG TERM 30 53176 - 53222 + F 73 -12.5 -3.17598 | gap 2, opp_overlap 53182, overlap 53172 53171 53177 AGTTCGATCACGACC ATTAGAGCGCGATGGC--TTCCC TTC GGGAAACGCTGTCGCGCTCTAAG TCATTTTGTGCGCAT TERM 31 53177 - 53221 + F 79 -16 -2.50077 | gap 2, opp_overlap 53182, overlap 53176 53172 53171 GTTCGATCACGACCA TTAGAGCGCGATGGC--TTCCC TTC GGGAAACGCTGTCGCGCTCTAA GTCATTTTGTGCGCA BRADO0047 53336 - 54466 + | glutamate carboxypeptidase trmB 54463 - 55194 + | tRNA (guanine-N(7))-methyltransferase BRADO0049 56288 - 55212 - | hypothetical protein TERM 32 56571 - 56594 + H 100 -8 -5.4833 | ACGATCGCGTAGTGA GGGTGGGCCC GTCC GGACCCGCTC TTTTTTGTTACCTGG BRADO0050 56773 - 57474 + | hypothetical protein nusA 57489 - 59096 + | transcription elongation factor NusA BRADO0052 59166 - 59909 + | hypothetical protein TERM 33 60035 - 60022 - g 77 -8.1 -4.30719 | CCGGGCGACAAGAAA CTCGG TGTC CCGAG CAAGACCTTGACGCT TERM 34 60172 - 60138 - g 76 -15 -3.14881 | gap 1, overlap 60126 GAAGCGCGGCACCAA GCGTCGCGTCG-GCG ATGGCG CGCCCGACGCGCCGC ATGCGCCGGAGCCGA TERM 35 60562 - 60516 - g 75 -12 -3.65046 | overlap 60517 GCTCGAGGCCAAGAA GCGCTTCGGCGAAGGCGAGGCG CCG CGTCCCGCGGCCGCCGCACCGC AGCCGACCGTCAGCG TERM 36 62374 - 62340 - g 73 -10.6 -3.67597 | overlap 62344 GGTCCGAGCCAACAA GGAAGCCGCCGCGCTC GCC AAGCGCAACGGCATCG AGATCCGCTACTACA TERM 37 62370 - 62344 - g 78 -14.4 -3.54902 | overlap 62340 CGAGCCAACAAGGAA GCCGCCGCGCTC GCC AAGCGCAACGGC ATCGAGATCCGCTAC infB 59989 - 62754 + | translation initiation factor IF-2 rbfA 62918 - 63334 + | ribosome-binding factor A TERM 38 64238 - 64264 + G 70 -11.4 -3.38812 | overlap 64237 TCACGCGGGCGGATG CGGCAAGGCTCC ATC GGGGCCAGGCCG TCTTGTTGCGCGGAC truB 63334 - 64431 + | tRNA pseudouridine synthase B rpsO 64434 - 64703 + | 30S ribosomal protein S15 TERM 39 64835 - 64821 - f 70 -10 -3.64599 | overlap 64825 GCAGGACACCGGAAA GAAGCG GAT CGCTTC ACGTGCCGGTCCGGC TERM 40 64951 - 65008 + F 100 -23.8 -6.09196 | gap 2, opp_overlap 64951 TCCGAAATAAGAAAA CCATG-GCAGGATCGCAGGGCGCTG-AT CGCA ATCCAGCGCCCTGCAATCTTGCGCATGG TTTTTTTGTTTTGGG TERM 41 65008 - 64951 - f 100 -23.8 -5.00196 | gap 2, opp_overlap 64951 TCCGAAATAAGAAAA CCATG-GCAGGATCGCAGGGCGCTG-AT CGCA ATCCAGCGCCCTGCAATCTTGCGCATGG TTTTTTTGTTTTGGG TERM 42 67197 - 67177 - g 75 -6.8 -4.42238 | gap 1, overlap 67178 CGAGGCCAAGCAAAA GGACGCCCC CGCC GAGGCG-CC GCGCGAGGCCGCCGG pnp 65060 - 67219 + | polynucleotide phosphorylase/polyadenylase TERM 43 67249 - 67268 + F 100 -15 -4.93968 | opp_overlap 67249 TCGAGAGACACCAAA GGGCGGCT TTCG AGCCGCCC TTTTTCATTATCGGT TERM 44 67268 - 67249 - f 89 -15 -3.91196 | opp_overlap 67249 TCGAGAGACACCAAA GGGCGGCT TTCG AGCCGCCC TTTTTCATTATCGGT BRADO0058 67425 - 67892 + | hypothetical protein BRADO0059 68024 - 68848 + | putative signal peptide BRADO0060 70864 - 68882 - | hypothetical protein TERM 45 71084 - 71032 - R 85 -5.5 -5.055 | gap 2, overlap 71034 TCAACTGGGAAAAAA TGGGTGCATCACGCTGCGCCGCCGG AACCG CCGACGGCG--GCCGGACACACCGA TGCGCGCGGGAACTA fabI 71903 - 71097 - | enoyl-[acyl-carrier-protein] reductase [NADH] (NADH-dependent enoyl-ACP reductase) fabB 73259 - 72036 - | 3-oxoacyl-(acyl carrier protein) synthase I fabA 73857 - 73336 - | 3-hydroxydecanoyl-(acyl carrier protein) dehydratase BRADO0064 74366 - 74749 + | ferric uptake regulation protein TERM 46 74777 - 74797 + T 100 -14 -4.34402 | opp_overlap 74772 TTCTAACTGAGCCGA TGCCCGCG TCGAC CGCGGGCA TTTTCGTGTCAGGAG BRADO0065 75378 - 74857 - | putative signal peptide TERM 47 76534 - 76511 - g 72 -13.8 -3.05463 | opp_overlap 76503, overlap 76491 ACCCGGCTGATCGAA GCCGGCGACA TCGC TGGCGCCGGC CTCGACGTGTTCGAG BRADO0066 75734 - 76735 + | putative D-isomer specific 2-hydroxyacid dehydrogenases family protein; putative glyoxylate reductase (glycolate reductase) BRADO0067 77791 - 76847 - | LysR family transcriptional regulator BRADO0068 77907 - 78911 + | oxidoreductase TERM 48 79048 - 79074 + T 72 -12.2 -3.30124 | GGATCCCGGATCTGC GCTCGACGACGC GCT GGGTCGCCGAGC TTGTCCGGGATGACA BRADO0069 79921 - 79118 - | putative molybdopterin biosynthesis protein moeB BRADO0070 80061 - 81428 + | hypothetical protein BRADO0071 81858 - 82661 + | hypothetical protein BRADO0073 83453 - 82971 - | putative cAMP-binding protein mutM 84395 - 83514 - | bifunctional formamidopyrimidine-DNA glycosylase/DNA-(apurinic or apyrimidinic site) lyase mutM TERM 49 84086 - 84072 - G 70 -10 -3.66883 | overlap 84063 84075 GGAAGACATGTGAAA CACGAC ATG GTCGTG GACGCTGTCCTTGCC ubiE 84502 - 85263 + | ubiquinone/menaquinone biosynthesis methyltransferase TERM 50 86089 - 86108 + G 77 -5.6 -4.65895 | gap 1, overlap 86088 TCCAGAGCTTCCTGC GCC-ACGCG CTG CGCGACGGC TTTTTCCATGCCGAC ubiB 85260 - 86834 + | ubiquinone biosynthesis protein ubiB TERM 51 87746 - 87730 - g 73 -13.7 -3.15861 | GATGATGTGGAGCAA TCCGGCG ACC CGCCGGA ACGCCGCGACCCTGC TERM 52 88478 - 88462 - g 73 -13.7 -3.14564 | GCATCTCTTGACGAA GGACGCC GAC GGCGTCC ATGTCGCGTCGTGGC coaBC 87140 - 88567 + | bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase dut 88564 - 89022 + | deoxyuridine 5'-triphosphate nucleotidohydrolase TERM 53 89182 - 89202 + F 73 -11.1 -3.54129 | overlap 89174 TCGGTGCGATCGGCG CCGCGCGGA ACT TTCGTGCGG TTTGGGGCAAATATG BRADO0079 89215 - 91722 + | putative sensor histidine kinase BRADO0080 91719 - 93248 + | bifunctional ATPase/phosphotransferase BRADO0081 93554 - 93859 + | hypothetical protein BRADO0082 94016 - 94738 + | putative nucleotidyl transferase family protein; putative mannose-1-phosphate guanyltransferase TERM 54 97326 - 97310 - g 75 -9.3 -4.09864 | opp_overlap 97308 97298 97317, overlap 97311 ACCCATGCGGCAAAA TCCGGCG GCG CGCCGGC TGTCGCTTCGCGCTT BRADO0083 95216 - 98362 + | helicase-exonuclease type V family protein AddB subunit TERM 55 98564 - 98594 + G 74 -14.8 -3.06183 | gap 1, opp_overlap 98564, overlap 98550 CCGCCGCCGCCAACA TGGCCGAGCG-CG TGTTCT CGACGCTCGGCCA TTGGGTGACGCTCGA TERM 56 98594 - 98564 - g 74 -14.8 -3.01712 | gap 1, opp_overlap 98550 98564 CCGCCGCCGCCAACA TGGCCGAGCG-CG TGTTCT CGACGCTCGGCCA TTGGGTGACGCTCGA TERM 57 99403 - 99366 - g 76 -8.9 -4.1899 | overlap 99367 CCACCTGATCGAAAA GCGCCGCGCCGCCGTCG TGCG CGACCGCACGGAGGCGC TGCTGCAGATCGCCA BRADO0084 98359 - 101829 + | helicase-exonuclease type V family protein AddA subunit trxA 101929 - 102252 + | thioredoxin 1, redox factor TERM 58 102260 - 102302 + F 79 -15.5 -2.87211 | gap 1, opp_overlap 102271 CGGTGTGATTTTGTA GGGTGGGCAAAGCAGCCGCC GTCA GGCGGCAGCG-TGCCCACCA TCTCTCCGCGAGCCT TERM 59 102292 - 102271 - f 77 -12.9 -3.53811 | opp_overlap 102260 TGTAGGGTGGGCAAA GCAGCCGCC GTCA GGCGGCAGC GTGCCCACCATCTCT TERM 60 102377 - 102367 - f 73 -8.2 -4.02022 | opp_overlap 102366 102367, overlap 102368 TCTAACGAGGAGAAA GCGC GGC GCGC CTTTGCCCACCCTAC TERM 61 102414 - 102435 + F 81 -12.9 -3.75332 | opp_overlap 102416 AGGATTTTTCTTGAA CAGCCGGCG GAAT CGCCGGCCG TTTGCGTTGAGGGGT TERM 62 102433 - 102416 - f 75 -14.1 -3.01924 | opp_overlap 102414 GATTTTTCTTGAACA GCCGGCG GAAT CGCCGGC CGTTTGCGTTGAGGG ligC 102527 - 103540 + | ATP-dependent DNA ligase BRADO0087 104281 - 103541 - | putative phosphoesterase BRADO0088 105638 - 104295 - | folC bifunctional protein TERM 63 104624 - 104661 + g 89 -18.3 -3.29144 | overlap 104625 CGCGCTCCTCGAGAT CGCCGATCGCGGCCGCG ACGA CGCGGCCGCCTTCGGCA TTGTGGCCGCCGTCG TERM 64 104625 - 104660 + g 100 -21.8 -2.57344 | overlap 104624 GCGCTCCTCGAGATC GCCGATCGCGGCCGCG ACGA CGCGGCCGCCTTCGGC ATTGTGGCCGCCGTC accD 106573 - 105635 - | acetyl-CoA carboxylase subunit beta trpA 107504 - 106668 - | tryptophan synthase subunit alpha TERM 65 106790 - 106846 + g 73 -10.6 -3.63627 | gap 1 TCGCCTTCAGGGCAT CCACCAGGGCGGT-GCCGACCACGGCG CCGT CAGCGTGGGCGGCGATAGCCCGGGCGG TTTCCGGTGTCCGAA trpB 108724 - 107501 - | tryptophan synthase subunit beta trpF 109380 - 108721 - | N-(5'-phosphoribosyl)anthranilate isomerase BRADO0093 109851 - 109459 - | putative signal peptide ihfB 110247 - 109930 - | integration host factor subunit beta TERM 66 110123 - 110099 - G 78 -6.4 -4.65895 | gap 1, overlap 110111 TGCTTGACGGAAAAA GCGCCGAAGCC ACGC AGC-TCGACGC GATCACCCCGCGCGA BRADO0095 111395 - 110415 - | S49 family peptidase TERM 67 111772 - 111791 + r 95 -16.4 -3.86202 | opp_overlap 111772, overlap 111789 CGATTGCACAAAAAA GCCCCGGC GTGA GCCGGGGC TTTGATCTCGTCGCA TERM 68 111791 - 111772 - R 100 -16.4 -5.26316 | opp_overlap 111772 111789 CGATTGCACAAAAAA GCCCCGGC GTGA GCCGGGGC TTTGATCTCGTCGCA rpsA 113528 - 111819 - | 30S ribosomal protein S1 cmk 114436 - 113798 - | cytidylate kinase (CK) (cytidine monophosphate kinase) (CMP kinase) aroA 115770 - 114433 - | 3-phosphoshikimate 1-carboxyvinyltransferase BRADO0099 115920 - 116324 + | hypothetical protein TERM 69 116374 - 116396 + F 86 -16.3 -3.17075 | GGTTCACGGTGCTCC CCGGCGGTC GCCCA GACCGCCGG TTCGGTTCAGGGGCC TERM 70 116482 - 116539 + F 100 -24.9 -2.62184 | gap 1 CGCCTGGCTCCACCA CGCTTCGCCCTCCGGACTACG-CGTGGC GCA GCCACGACGGAGCCCGAACGGCGAAGCG TGGTGTCCGGCGAAG BRADO0100 116707 - 116958 + | excinuclease ABC subunit C ohrR 117421 - 116966 - | organic hydroperoxide resistance transcriptional regulator ohr 117594 - 118019 + | organic hydroperoxide resistance protein TERM 71 118029 - 118073 + F 76 -12.8 -3.42366 | gap 1, overlap 118052 GTCTGAGGTTGAATT CCGTCCTGCGGCAGGGC-TGC CCCG GCGCGCTCTGCCGCAGCGCAG TTCTCGCCTTTTCGC TERM 72 118086 - 118111 + F 79 -13.9 -3.53224 | overlap 118093 118109 CAGTTCTCGCCTTTT CGCGCGGCTGC CTCC GCGGCGGCGCG TTTGCGCAAGCGCTG TERM 73 118403 - 118431 + G 73 -12.3 -3.39784 | overlap 118419 GCGCTCGATCGGCCT CGACCTCGCCTCC GAG GGCGGCCGGGTCG TCTTGTTGAAGATGC BRADO0103 118176 - 119378 + | putative caiB/baiF CoA-transferase family protein; putative Formyl-CoA transferase BRADO0104 119646 - 120887 + | putative sugar ABC transporter (substrate binding protein); putative glycerol 3-phosphate transport protein, ugpB-like protein TERM 74 120900 - 120929 + F 87 -19.3 -2.81133 | opp_overlap 120891 120888 TAAGATCGCCCGGAC GGGCTCCTCCTCC AATA GGTGGAGGAGCCC TGTCGTCCGTCCCTC BRADO0105 120959 - 121840 + | putative sugar ABC transporter (permease protein); putative glycerol 3-phosphate transport protein, ugpA-like protein TERM 75 122415 - 122449 + G 73 -14.3 -3.20494 | gap 1, overlap 122414 122417 CTTCTTCTGGGACAC GCTGCTGCCGCTGTCG ATGA CGACGGTGGCGGC-GC TGTTCGTGATTCAGT BRADO0106 121840 - 122688 + | putative sugar ABC transporter (permease protein); putative glycerol 3-phosphate transport protein, ugpE-like protein TERM 76 123776 - 123733 - g 71 -15.2 -2.57344 | overlap 123732 123735 123759 GACGTGGGCCACAAT GACAGCCTCACGGCCACGGC GAAC GACGTGATCGTGCGGCTGCC GGGCACCACGGCGCC TERM 77 123774 - 123735 - g 71 -14.2 -2.82623 | overlap 123733 123732 123759 CGTGGGCCACAATGA CAGCCTCACGGCCACGGC GAAC GACGTGATCGTGCGGCTG CCGGGCACCACGGCG BRADO0107 122800 - 123879 + | glycerol-3-phosphate transporter ATP-binding subunit BRADO0108 124014 - 124439 + | putative small heat shock protein; putative HSP20-like chaperone BRADO0109 124498 - 124761 + | hypothetical protein TERM 78 124872 - 124846 - f 77 -15.1 -2.64933 | opp_overlap 124846 GATGCACTGATACGA GGGCGGCTCCC GACCA GGGAGCGGCCC TTTTTTCTCGCCCGA TERM 79 124846 - 124872 + F 100 -15.1 -5.24129 | opp_overlap 124846 GATGCACTGATACGA GGGCGGCTCCC GACCA GGGAGCGGCCC TTTTTTCTCGCCCGA BRADO0110 124912 - 125421 + | GNAT family acetyltransferase ptsN 125900 - 125439 - | nitrogen regulatory protein BRADO0112 126833 - 126231 - | sigma-54 modulation protein TERM 80 126777 - 126808 + g 83 -8.6 -4.57569 | gap 1, overlap 126765 126781 GGTGCGCTCGCTGAC GCGGCCGCG-CAGCG CTT CGCTGACGCTGATGC TTTTTCCGGAAATCC rpoN 128564 - 126924 - | RNA polymerase factor sigma-54 TERM 81 128412 - 128441 + g 70 -10.7 -3.61517 | gap 1, overlap 128414 CGGGCCATCGTTCGC GCGCTCGAGCAGCG GAT TGC-GCTCGAGCTC TTCTTCGACGAACGT TERM 82 128414 - 128439 + g 70 -11.9 -3.38812 | gap 1, overlap 128412 GGCCATCGTTCGCGC GCTCGAGCAGCG GAT TGC-GCTCGAGC TCTTCTTCGACGAAC BRADO0114 129825 - 128776 - | putative ABC transporter ATP-binding protein TERM 83 129965 - 129950 - R 75 -11.8 -3.57615 | opp_overlap 129944 129943, overlap 129901 GCAAGACCGGCCAAA GCGCGG CGGA CCGCGC TCCGGAGTTGTCGTC BRADO0115 130887 - 130189 - | putative OstA-like protein BRADO0116 131602 - 130892 - | hypothetical protein BRADO0117 132375 - 131761 - | putative 3'-5' exonuclease family protein TERM 84 132588 - 132552 - H 81 -15.7 -3.05384 | GCCGCCCGGACGCAA GGGCCGGCCTGGGCCGG CAG CCGATCCAGGGCGGCGC CCCGCCCGGCCCGGC BRADO0118 132868 - 133839 + | putative TRAP-type C4-dicarboxylate transport system, binding periplasmic protein (DctP subunit) TERM 85 133907 - 133884 - f 83 -9.5 -4.30416 | overlap 133885 133887 AGCACCAACTCAAAA CGACGACGG CCGGCT CCGGCGTCG CCACCAGGCGACGCC TERM 86 133937 - 133887 - f 73 -13.1 -3.14307 | gap 1, overlap 133884 133885 ACCAACTCAAAACGA CGACGGCCGGC-TCCGGCGTCGCC ACCA GGCGACGCCGGATGACCGCAGGGG AGGGACGGGAATGAC BRADO0119 133948 - 134493 + | putative TRAP-type C4-dicarboxylate transport system, small permease component (dctQ subunit) BRADO0120 134484 - 135776 + | putative TRAP-type C4-dicarboxylate transport system, large permease component (dctM subunit) TERM 87 135900 - 135874 - T 100 -23.8 -3.28712 | TGTCGTCCCGGACAA GCCCACCGACGC AAC GCGTCGGTGGGC GCTGATCCCGGACCC BRADO0121 136858 - 136094 - | hypothetical protein BRADO0122 137084 - 136941 - | putative cytochrome c precursor TERM 88 137674 - 137650 - R 83 -17.1 -2.63715 | opp_overlap 137640 137638 137637, overlap 137665 AGCCAGCGCAGAGCA CGGGGACCGGC GAA ACCGGCCCCCG CGATCTCCAATGATT BRADO0123 139410 - 137689 - | putative quinoprotein ethanol dehydrogenase family protein TERM 89 139929 - 139903 - H 100 -23.8 -3.28712 | overlap 139919 TGTCGTCCCGGACAA GCCTGCCGACGC AAA GCGTCGGCAGGC GTCGATCCGGGACCC BRADO0124 140245 - 141123 + | putative oxidoreductase; putative 3-hydroxyisobutyrate dehydrogenase BRADO0125 141880 - 141449 - | hypothetical protein TERM 90 143172 - 143135 - H 79 -9.1 -4.21922 | gap 1, overlap 143136 TCAGGGAAAATCAAA TCCGAGCCTCAGCTCGGC GGC GCCACGCGGAG-CTCGAA GAGCGAAGCGTGGTG BRADO0128 143495 - 144463 + | putative NAD dependent epimerase/dehydratase family protein TERM 91 144563 - 144526 - T 70 -11.9 -3.18274 | gap 1, opp_overlap 144538, overlap 144490 144528 GGCAGTCTAAGTGAA GACGGTGGGC-ACGGCGC TGC GCGCCTTTGCCCACCCAC CCTACGCAATGACTA TERM 92 144561 - 144528 - T 73 -13.1 -3.15354 | gap 1, opp_overlap 144538, overlap 144490 144526 CAGTCTAAGTGAAGA CGGTGGGC-ACGGCGC TGC GCGCCTTTGCCCACCC ACCCTACGCAATGAC uppP 145382 - 144576 - | undecaprenyl pyrophosphate phosphatase TERM 93 145672 - 145691 + H 73 -11.4 -3.58329 | overlap 145667 CGGTATCGGGACGAT CCATCGGC GCGC GCCGGTGG TTGATTGTTCGTTAA BRADO0130 145741 - 146433 + | putative glutathione S-transferase family protein TERM 94 146882 - 146861 - g 72 -7.1 -4.18018 | overlap 146862 CGCCGTCATGGAAAA GCCGCTGGC GGAA GCCGCCGGC CTCGGCTGGCAGGGC BRADO0131 146583 - 147560 + | putative iron-sulfur cluster binding protein BRADO0132 148357 - 147572 - | hypothetical protein TERM 95 148166 - 148204 + g 71 -14.6 -2.51173 | gap 2, opp_overlap 148148, overlap 148165 148156 GAACCGGACGCAGGC GCGGCCGCGCTCG--GCC GCCCA GGCTTCGAGCGCGACCGC CTTGGTGCCCTTCAT infC 148620 - 149222 + | translation initiation factor IF-3 TERM 96 149251 - 149271 + T 100 -14 -4.66537 | opp_overlap 149248 CACGCTTCAAACCGG GCCCGCCA CGCGT TGGCGGGC TTTTCTCTTGAGGCG TERM 97 149286 - 149302 + T 72 -7.9 -4.10657 | CTTTTCTCTTGAGGC GACGGAC CAC GGCCGTC TTTTGGCCGGTGTCA BRADO0135 149680 - 149315 - | putative signal peptide TERM 98 150070 - 150093 + G 70 -11 -3.53012 | gap 1, opp_overlap 150060 AAGAAGCAGATCCGG CAGCTGCGCGG CAC CCGCGT-GCTG TTTAAGACCGACGGC rpmI 149944 - 150144 + | 50S ribosomal protein L35 rplT 150217 - 150576 + | 50S ribosomal protein L20 TERM 99 150606 - 150626 + F 100 -14 -4.84527 | opp_overlap 150606 GTGAGGACTTCAAAA GCGGCCGA CACCC TCGGCCGC TTTTTGCTGTCTAGC TERM 100 150626 - 150606 - f 93 -14 -4.15565 | opp_overlap 150606 GTGAGGACTTCAAAA GCGGCCGA CACCC TCGGCCGC TTTTTGCTGTCTAGC pheS 150720 - 151802 + | phenylalanyl-tRNA synthetase subunit alpha BRADO0140 151799 - 152215 + | hypothetical protein TERM 101 153897 - 153919 + G 70 -13.4 -3.04144 | GCAGGCCAATGCCGA TCGCGGCTTC GGG GATGCCGCGA TCTTCGAGGTCGGAC pheT 152212 - 154620 + | phenylalanyl-tRNA synthetase subunit beta BRADO0142 154617 - 155408 + | hypothetical protein BRADO0143 155442 - 156386 + | beta-lactamase family hydrolase TERM 102 156426 - 156406 - T 79 -13.9 -3.53012 | opp_overlap 156395, overlap 156374 CGTCGGGTGGGCAAA GCAGCCGCC GGA GGCGGCAGC GTGGCCACCGTCTCT BRADO0144 157951 - 156542 - | putative flavin containing amine oxidoreductase TERM 103 156831 - 156862 + g 70 -13 -3.05384 | gap 1 ACCTGATTCCAGCGC GTGGCGGCCGACG ACTTCAC CG-CGGCCGCCGC TTCGCTGCCGAACAG TERM 104 157353 - 157379 + g 75 -13 -3.35679 | gap 1, overlap 157378 TGGCGGCAGGCGAGC GGCGCGCTGCG GTCCTG CGC-GCGCGCC TTGTCCATCACCGAG BRADO0145 158146 - 159123 + | hypothetical protein BRADO0146 159401 - 159126 - | hypothetical protein TERM 105 161693 - 161666 - g 86 -17 -3.30124 | overlap 161667 GCTGACCGGCGACAA CCGCACCACCGC GACG GCGGTGGCGCGA AAAATCGGCATCACC TERM 106 161692 - 161667 - g 85 -18.3 -2.57931 | overlap 161666 CTGACCGGCGACAAC CGCACCACCGC GACG GCGGTGGCGCG AAAAATCGGCATCAC TERM 107 161722 - 161698 - g 76 -6.3 -4.56597 | overlap 161700 CGGTGGCGCGAAAAA TCGGCATCACC GAG GTCGAGGCCGA GGTGCTGCCTGAGCA actP 159669 - 162137 + | copper-transporting P-type ATPase TERM 108 162227 - 162178 - Tf 91 -19.4 -3.09635 | opp_overlap 162186 162190, overlap 162182 162186 162190 ACTGCGAGGAGCGAA GCGACGAAGCAATCCAGAGTCC CAACGC GGCCCCTGGATTGCTTCGCTGC GCTCGCAATGACAGA TERM 109 162223 - 162182 - Tf 90 -19.6 -2.55544 | opp_overlap 162186 162190, overlap 162178 162186 162190 CGAGGAGCGAAGCGA CGAAGCAATCCAGAGTCC CAACGC GGCCCCTGGATTGCTTCG CTGCGCTCGCAATGA TERM 110 162219 - 162186 - Tf 73 -13.2 -3.22388 | opp_overlap 162186 162190, overlap 162182 162178 162190 GAGCGAAGCGACGAA GCAATCCAGAGTCC CAACGC GGCCCCTGGATTGC TTCGCTGCGCTCGCA TERM 111 162611 - 162644 + GT 79 -11 -3.87373 | overlap 162614 CGGCGGCATCATGCT GATGCCCGCGATCA CCTCGC TGATCGCGAGCCTC TTTGTCGACGATGTC BRADO0149 164657 - 163038 - | multidrug ABC transporter membrane protein BRADO0148 162348 - 163100 + | CysZ-like protein TERM 112 163194 - 163224 + gT 74 -13.2 -3.28712 | overlap 163179 163195 GGCGAGCAGCGACCA CGCCTCGTTGACGC ACA GCGCCAGCGAGGCC TTCTCCACCAGCGGG TERM 113 163195 - 163223 + gT 80 -16.7 -2.57132 | overlap 163179 163194 GCGAGCAGCGACCAC GCCTCGTTGACGC ACA GCGCCAGCGAGGC CTTCTCCACCAGCGG TERM 114 164365 - 164346 - GT 70 -10 -3.62572 | gap 1 CAGCAGCATGTGAAA GCTGC-CGC TCA GCGCGCAGC CGAGCGAAGCTGCCG BRADO0150 165136 - 164654 - | hypothetical protein BRADO0151 166221 - 165169 - | putative Type III polyketide synthase; putative chalcone synthase nth 167437 - 166604 - | endonuclease III DNA-(apurinic or apyrimidinic site) lyase BRADO0153 167460 - 167993 + | hypothetical protein BRADO0154 168384 - 169283 + | putative methylated-DNA--protein-cysteine methyltransferase (O-6-methylguanine-DNA alkyltransferase); putative ADA regulatory protein BRADO0155 169721 - 169380 - | hypothetical protein TERM 115 169442 - 169453 + g 77 -5.8 -4.64766 | overlap 169439 GTAAAGCGACCTGAG CGAG ACCA CTCG TTTTTGAGATGTAGA BRADO0156 170355 - 170071 - | hypothetical protein gpmA 171442 - 170819 - | phosphoglyceromutase dapB 172285 - 171467 - | dihydrodipicolinate reductase BRADO0159 172669 - 172367 - | hypothetical protein pyrF 173434 - 172703 - | orotidine 5'-phosphate decarboxylase (OMP decarboxylase) (OMPDCase) (OMPdecase) BRADO0161 174052 - 173441 - | putative NADPH-dependent FMN reductase pmtA 174667 - 174065 - | phospholipid N-methyltransferase TERM 116 174609 - 174632 + g 74 -5.2 -4.56597 | opp_overlap 174605, overlap 174610 GAGCGGAGGAAGCGC ACCTCGTCGT CCAG ACGAAGAGGC TTTTTCGACGCACGC dnaJ 176015 - 174885 - | chaperone protein dnaJ, heat shock protein (Hsp40), co-chaperone with dnaK TERM 117 176134 - 176086 - R 100 -20.6 -4.4078 | opp_overlap 176101 176105 CCGGTTCAATGAAAA TGACCCCCAT-CCAACGAGACGCT GAC AGCG-CTCTTTGGCATGGGGGTCA TGGCTCTCGGCCTCT dnaK 178053 - 176158 - | molecular chaperone DnaK TERM 118 178234 - 178218 - H 93 -7.9 -5.0133 | opp_overlap 178207 178206 GACGCGCGGAAAAAA CCGCGGA TTT TTCGCGG CTCCGGTAAGGGCCC BRADO0165 178591 - 179526 + | putative signal peptide BRADO0166 180232 - 179537 - | putative S-adenosyl-L-methionine (SAM)-dependent methyltransferase TERM 119 180059 - 180038 - G 78 -6.5 -4.57837 | overlap 180047 ATACCGCCGGAAAAA CGGAATCGA GTTG CCGATGCCG GCGCCGAAATCGCAG TERM 120 180271 - 180286 + H 74 -10.4 -3.76482 | overlap 180251 GAGGTCCGGCAAGTC CAGGCC GCGG GGCCTG TTCTTGATCGTCTCG BRADO0168 180504 - 181550 + | glycosyl transferase family protein BRADO0169 181547 - 182146 + | methyl transferase BRADO0170 183664 - 182147 - | hypothetical protein TERM 121 183674 - 183703 + r 71 -8.5 -3.90112 | GCTCATGGGACCGTC CTCTGCGAGAGTG GGCC CACGCTAGCGGAG TTTGGTTAAGGCACG TERM 122 183934 - 183892 - R 100 -12 -4.59773 | overlap 183894 GCCCAGGTTCAAAAA CG-CTTGGGGCGCCGCATCC GAACT GGATG-GGCGCCCCGTGTCG CATGAACTGATGGAG TERM 123 183931 - 183894 - R 71 -13.4 -2.61004 | gap 1, overlap 183892 CCAGGTTCAAAAACG CTTGGGGCGCCGCATCC GAACT GGATG-GGCGCCCCGTG TCGCATGAACTGATG grpE 184579 - 183959 - | protein grpE (HSP-70 cofactor) hrcA 185798 - 184710 - | heat-inducible transcription repressor TERM 124 185610 - 185588 - G 70 -13.4 -3.00946 | overlap 185585 GCGGCGCATAAATCA GGCCGAGCTG CTC CAGATCGGCC ATCACGTTGCGCACC rph 185987 - 186700 + | ribonuclease PH BRADO0174 186733 - 187341 + | putative deoxyribonucleotide triphosphate pyrophosphatase BRADO0175 187328 - 188485 + | coproporphyrinogen III oxidase TERM 125 188655 - 188712 + T 70 -9.8 -3.54741 | gap 1, opp_overlap 188674, overlap 188656 CGCAACCTGCAAGCT CGCGGCGCGTCTCGAACCATGAGGTCC AGTTG GGGCCTCGCCCTTCGAGATGC-CCGCC TTTGGCGGGCTCCTC BRADO0177 190058 - 188799 - | hypothetical protein TERM 126 190171 - 190204 + H 70 -12.4 -3.12999 | CACGCACTATCCCCC GTTCGCGGCCGTGT GGTGGA ATGCGGCCGCGCAC TTGAATCTCCGATGA TERM 127 190742 - 190797 + G 81 -11.6 -3.9461 | gap 1, overlap 190743 CGGTGACCGCATTGC CCGGCCCGTCAGCCGTGCTGGCGGCGC TGA GCGTCGC-GGCGCTGCCGACAGACCGC TTCTTCTTCGAAGGA TERM 128 190743 - 190796 + G 74 -15.1 -2.96444 | gap 1, overlap 190742 GGTGACCGCATTGCC CGGCCCGTCAGCCGTGCTGGCGGCGC TGA GCGTCGC-GGCGCTGCCGACAGACCG CTTCTTCTTCGAAGG BRADO0178 190381 - 191268 + | putative methyltransferase BRADO0179 191255 - 191680 + | hypothetical protein gshB 191714 - 192655 + | glutathione synthetase TERM 129 192721 - 192764 + F 75 -14 -3.06183 | opp_overlap 192726 192730, overlap 192726 GTCATTGCGAGCGTA GCGAAGCAATCCAGAATC CCGCCCAC GACCCTGGATTGCTTCGC TTCGCTCGCAATGAC BRADO0181 193090 - 193905 + | putative exodeoxyribonuclease III (xthA) BRADO0182 194438 - 194022 - | putative cyclic nucleotide binding protein BRADO0183 195218 - 194532 - | putative two-component transcriptional regulator. TERM 130 195642 - 195615 - g 70 -11.2 -3.61398 | gap 1 CGTGCTGGCCAACAA GCGCGAGGGCGAC GGC GGCACCC-CGCGC GGCACATTCCACCCA TERM 131 195887 - 195861 - g 73 -12.3 -3.43492 | gap 2, opp_overlap 195883, overlap 195863 CGAGATCGACCACAA CACGCGGCCGCGG GTC CC-CGGCCGCG-G CAGCGCCGTGTTCCT TERM 132 195886 - 195863 - g 80 -16 -3.28714 | gap 1, opp_overlap 195883, overlap 195861 AGATCGACCACAACA CGCGGCCGCGG GTC CC-CGGCCGCG GCAGCGCCGTGTTCC BRADO0184 195469 - 196017 + | putative signal peptide BRADO0185 196040 - 196825 + | putative hydratase/decarboxylase BRADO0186 197551 - 196868 - | putative signal peptide TERM 133 197626 - 197613 - H 78 -6.7 -4.60041 | ACGGAGTTCGAAAAA GGGTT CTTG AACCC TTCCCCTTACCCTGC BRADO0187 197664 - 199361 + | hypothetical protein BRADO0188 200368 - 199382 - | GGDEF domain-containing protein TERM 134 200363 - 200381 + g 81 -11 -4.07885 | TGGTACGCGCTGTTG GGCCATGG ATT TCATGGCC TTTTCCGCGACAGTC TERM 135 201375 - 201339 - g 73 -12.9 -3.28712 | CCGCTGGCCGGACAA GGTGCGGCTGATGCAGC GCA ACTGGATCGGCCGCTCC GAAGGCCTGCTGATC TERM 136 202639 - 202602 - g 70 -8.3 -3.97139 | opp_overlap 202634 202635 202637, overlap 202584 202583 202581 GAAGTCGAAGAAGAA CACCGTCGACCCCGACG ACAT CATCGAGAGCTACGGCG CCGACGTCGCGCGCT TERM 137 202964 - 202950 - g 74 -12.8 -3.53444 | CGACGTGCTGGCAAA GCCGGC CAA GCCGGC GCCGGACCTCGCCTG leuS 200692 - 203316 + | leucyl-tRNA synthetase BRADO0190 203303 - 203854 + | hypothetical protein holA 203873 - 204901 + | DNA polymerase III subunit delta parB 206210 - 205371 - | chromosome partitioning protein TERM 138 205483 - 205524 + g 85 -8 -4.82901 | gap 2, overlap 205481 205487 AGGGTGAGGCCGAGC GCATCGCCGACGCGCTTCTC CAAC GCGA-GCGTGTCGGCG-TCC TTTTTCTCGGGCGCG TERM 139 205487 - 205521 + g 75 -14.3 -3.31915 | gap 1, overlap 205481 205483 TGAGGCCGAGCGCAT CGCCGACGCGCTTCTC CAAC GCGA-GCGTGTCGGCG TCCTTTTTCTCGGGC TERM 140 206356 - 206342 - R 84 -8.6 -4.4078 | opp_overlap 206354, overlap 206344 206346 TCGGCGCAATGAAAA GGGATT GCG AATCCC GCTGCCGGTATTCGC parA 207280 - 206429 - | chromosome partitioning protein TERM 141 207159 - 207121 - G 82 -17.5 -2.82023 | gap 1, opp_overlap 207119, overlap 207118 GATCGAGATCAACGA TCAGCAC-GCGCTCGCCG ATCG CGGCCAGCGCAGTGCCGA GATTGATCGCGGTCG gidB 207980 - 207312 - | glucose inhibited division protein B; methyltransferase gidB TERM 142 207451 - 207464 + g 81 -3.7 -5.00616 | opp_overlap 207450 207452, overlap 207452 TGACCCTTGAGAAAC AGCGC TTTC GCGCC TTTTTTCACCAAGGG gidA 209867 - 207993 - | tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA trmE 211427 - 210093 - | tRNA modification GTPase TrmE TERM 143 211722 - 211701 - R 100 -17.3 -5.40072 | TGGGTCGCAAAAAAA GGGGCGCTC CGAA GAGCGCCCC TCCAAATCCTGTCAT rho 213014 - 211749 - | transcription termination factor Rho TERM 144 213220 - 213203 - R 72 -2.7 -4.67943 | CCTTAATATAGAAAA TTGCG CCGCCGTT CGCAA GGCATCTCGGGCGGA BRADO0198 213679 - 213257 - | hypothetical protein BRADO0199 214094 - 214933 + | hypothetical protein TERM 145 215048 - 215018 - g 71 -12.4 -3.28924 | overlap 215019 CATGTTGCTCGAGAA TGCCGGCCTCGCCT GCG AGGCGGTGCCGGCG GATATCGACGAGCGC TERM 146 215047 - 215019 - g 74 -15.9 -2.57211 | overlap 215018 ATGTTGCTCGAGAAT GCCGGCCTCGCCT GCG AGGCGGTGCCGGC GGATATCGACGAGCG TERM 147 215264 - 215216 - g 70 -10.2 -3.63515 | gap 1, overlap 215217 GCGCATGTTCAACAA GCCGGCCGGACGGCAGCAGGCGA TGCA TCAGCTGCTGGC-TCTGGCCGGG CGGACGCATGCGCTG BRADO0200 214944 - 215552 + | putative maf-like protein coaE 215581 - 216186 + | dephospho-CoA kinase dnaQ 216220 - 216918 + | DNA polymerase III: epsilon subunit, 3-5 exonucleolytic proofreading function secB 217463 - 216975 - | preprotein translocase subunit SecB TERM 148 218023 - 218065 + G 73 -15.5 -2.52464 | gap 1 ATGTCATGCCGGTTC CCGGCGCCC-CGCTCGATCC GGCG GGACCGAGCACGGGCGCCGC TGACTTCGGCGCGCC BRADO0204 217866 - 218567 + | hypothetical protein BRADO0205 218707 - 220335 + | putative membrane-bound lytic murein transglycosylase BRADO0206 220348 - 220923 + | putative Smr protein/MutS2 C-terminal BRADO0207 222048 - 220927 - | hypothetical protein TERM 149 222220 - 222203 - R 70 -12.7 -2.87132 | TGCGGTGGTTATAGA TCCCGGC GTTC GCCGGGA CGACGGCGGAATGCG hslU 223570 - 222266 - | ATP-dependent protease ATP-binding subunit BRADO0209 224088 - 223576 - | putative aminoglycoside N(6')-acetyltransferase (aacA4) BRADO0210 224362 - 224102 - | hypothetical protein hslV 224926 - 224366 - | ATP-dependent protease peptidase subunit hisB 225121 - 225714 + | imidazoleglycerol-phosphate dehydratase TERM 150 226224 - 226202 - g 71 -14.8 -2.57931 | opp_overlap 226195, overlap 226201 CCGACGCGTGACAAT GGCAACGGCC AGC GGCCGCCGCC GCTACCCCATGCCAG BRADO0213 225755 - 226279 + | hypothetical protein hisH 226276 - 226926 + | imidazole glycerol phosphate synthase subunit HisH hisA 226985 - 227719 + | 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase TERM 151 228375 - 228426 + G 71 -12.3 -3.27525 | gap 2 CAATCTGGACCACCT GGTCGACGGCATCCAGCAGGGCAGG GCGA CC-GCCGTGCTGGCCGCC-TCGATC TTCCATTTCGGGGAA hisF 227731 - 228507 + | imidazole glycerol phosphate synthase subunit HisF hisE 228589 - 228912 + | phosphoribosyl-ATP pyrophosphatase TERM 152 228923 - 228891 - f 100 -13.3 -4.63218 | overlap 228905 GGGGCTGGAAGAAAA GGCGTCGCGCAAGAC GGA GTAGGGCGCGACGCC GGGGGAAACGAAGGG coaA 228946 - 229902 + | pantothenate kinase BRADO0219 232469 - 230205 - | sensor histidine kinase BRADO0220 233101 - 232607 - | putative signal peptide BRADO0221 234729 - 233191 - | transcriptional regulator TERM 153 234656 - 234640 - G 70 -10.8 -3.62096 | CCCGACGATCGCAAA CGCCGG CAATC CCGGCG CGACCTGGACCTGCA TERM 154 235633 - 235579 - g 72 -13.6 -3.14132 | gap 4, overlap 235556 CGCCCGCTTCATCAA GGCGGCGC-CGCC--GGCGACCCGC-GC TAC GCTGCAGGCCGCCCCGACGCGCTCCGCC GCCGCGGCGATGCGG BRADO0222 234956 - 236017 + | putative signal peptide BRADO0223 236809 - 236042 - | putative signal peptide TERM 155 236399 - 236438 + g 90 -18.6 -3.01712 | GCGCACCACCAGCGA CGAGCCGTCGGCGATGAT GTCG ATCGGCGTCGGCGGCTCG TATTCGAAGCGCACC ftsK 239454 - 236989 - | DNA translocase TERM 156 238267 - 238305 + g 70 -10.3 -3.72576 | overlap 238252 238268 CAGCGCGCTCATCGA GCG-CGCGATGTCGTCGGC GAG GCCGATGACG-CGCGACGA TTTGATGCCGGGCGC TERM 157 238268 - 238304 + g 71 -13.8 -2.83403 | overlap 238252 238267 AGCGCGCTCATCGAG CG-CGCGATGTCGTCGGC GAG GCCGATGACG-CGCGACG ATTTGATGCCGGGCG BRADO0225 240680 - 239466 - | putative aminotransferase (aatC) TERM 158 240953 - 240922 - H 70 -13.1 -2.88544 | gap 1, overlap 240924 GCGGACTGCGAGATA CAGCGCCCTCTCCC CTTGC GGGAGAGGGCA-TG TACGGCCCATCCGCG BRADO0226 241580 - 244084 + | putative outer membrane protein BRADO0228 245787 - 245029 - | putative 3-oxoacyl-[acyl-carrier-protein] reductase 1 (fabG1) TERM 159 245805 - 245820 + H 73 -3.2 -4.72272 | overlap 245806 CCCAGCGTCTCCCGT TGCCTT CGAA AGGGCG TTTTTGCTAAGGCAG TERM 160 246931 - 246963 + G 75 -12 -3.65351 | gap 1, overlap 246932 ATGCGGGCGAGCGGG TGCCCGGC-GCGG TCGGCTTC CCGCTGCCGGGCG TTTCCGTGCGCGTCA TERM 161 247267 - 247285 + G 70 -11 -3.53563 | TCGAGTCCGCGGTCA TCGGCGTG CCG CATGCCGA TTTCGGCGAGGGTGT BRADO0229 245967 - 247493 + | malonyl-CoA synthase BRADO0230 247689 - 247501 - | hypothetical protein TERM 162 247901 - 247919 + H 70 -11.6 -3.17194 | opp_overlap 247878, overlap 247917 TTGGCGTCGACTTGC CCCGGCGC AAA GCGCCGGC TTCCCTTGCGAGCCT TERM 163 247917 - 247933 + H 81 -4.3 -5.00616 | overlap 247901 CCGGCGCAAAGCGCC GGCTTCC CTT GCGAGCC TTTTTTCGCCCCGCG sdhC 248333 - 248731 + | succinate dehydrogenase cytochrome b556 subunit sdhD 248752 - 249126 + | succinate dehydrogenase hydrophobic membrane anchor protein sdhA 249130 - 250968 + | succinate dehydrogenase flavoprotein subunit sdhB 251018 - 251800 + | succinate dehydrogenase iron-sulfur subunit TERM 164 251822 - 251862 + F 81 -7.6 -4.42386 | gap 1, opp_overlap 251822 251825, overlap 251825 AGCAAGGGTAATATA TCA-TTGCGCCCGGGCC CGTCGGAA GTTCCGGGCGCAGCTGA TTTTGTAGCTGACGC BRADO0236 251919 - 254069 + | sensor histidine kinase TERM 165 254813 - 254862 + G 70 -8.8 -3.90318 | gap 2 GCTCACGCTGCGTCT CGGCGGCAGCGAGCTCACCA TTCCCGGCTTCC TGGTGA--TCGCTGCCGTCG TTTATGCCGTGATCG TERM 166 255460 - 255410 - g 80 -16.9 -2.72344 | gap 2 GCTCAGCCTGAACGA TCTCTCGGTCACGCTCGACGACGGC AAG GCCGTGGTCG-GCGAGACCGAG-GT CGTGGTCGATCCCGG BRADO0237 254109 - 256085 + | putative ABC transporter (fused ATP-binding and permease components) BRADO0238 256182 - 257009 + | putative methyltransferase BRADO0239 257098 - 257583 + | putative general stress protein 26 BRADO0240 257580 - 257819 + | hypothetical protein TERM 167 257857 - 257872 + F 75 -11.8 -3.54424 | opp_overlap 257853 257852 257857, overlap 257860 257861 ATGGACAGAAGGAGA GCCGGC GCAC GCCGGC TTTCGGCGCGTCGCG TERM 168 258684 - 258654 - f 75 -14.6 -2.78384 | GCGCGTCCGACCACA CCGCCTCCGCCGCC AGC GGCGACGCAGGCGC CGCCTCCCGGCGCCG BRADO0242 259183 - 260196 + | hypothetical protein TERM 169 260249 - 260218 - T 83 -16 -2.8739 | opp_overlap 260223, overlap 260223 GAGACGAACCGAAAT GAAAATGGCCGGGA GAAA TCCCGGCCATTTTT GCTGATGCAAACGCC TERM 170 260223 - 260244 + T 100 -15.9 -4.77036 | opp_overlap 260218 260223 GAACCGAAATGAAAA TGGCCGGGA GAAA TCCCGGCCA TTTTTGCTGATGCAA TERM 171 260244 - 260223 - T 100 -15.9 -4.5852 | opp_overlap 260223, overlap 260218 GAACCGAAATGAAAA TGGCCGGGA GAAA TCCCGGCCA TTTTTGCTGATGCAA argG 262096 - 260750 - | argininosuccinate synthase BRADO0244 262978 - 262196 - | putative phosphatase BRADO0245 263500 - 263018 - | hypothetical protein BRADO0246 264865 - 263654 - | putative pyruvate formate lyase activating enzyme 2 (yfgB) TERM 172 264981 - 264945 - R 76 -9.4 -4.07687 | gap 1, overlap 264958 ATTCGGCCGCCAAAA GCGACCCGC-AAGACCA GCGG CGGTATCGGCGGGCCGC TAGCGGCGGCAGTCC BRADO0247 265544 - 264981 - | hypothetical protein TERM 173 265838 - 265869 + H 72 -12.2 -3.28712 | gap 1, overlap 265839 AGGCGGGATTTGCCG GCGGCCACGCGACGC ATT GCG-CGCGTTGCCGA TTGTCGCGGGAACGC TERM 174 265839 - 265868 + H 77 -15.7 -2.57132 | gap 1, overlap 265838 GGCGGGATTTGCCGG CGGCCACGCGACGC ATT GCG-CGCGTTGCCG ATTGTCGCGGGAACG BRADO0250 265947 - 266921 + | putative quinone oxidoreductases (NADPH) and Zn-dependent alcohol dehydrogenases TERM 175 268411 - 268354 - g 75 -13.3 -3.36749 | gap 1 CATCCGCAACATCAA CGCCGATCCG-GCCGCGGCGCGCAAC TGGTATC GCCGCGCGGCGCAACTCGGCTCCGCG GAAGCGCAGCGCCGG BRADO0251 267422 - 268447 + | hypothetical protein TERM 176 268448 - 268481 + F 100 -5.1 -5.95539 | opp_overlap 268449 268453, overlap 268453 CAGCTGCAGAATTGA ACCCACGTGACGGCA GCGA TGCCGCCACGTTTGA TTTTTTTGTTTCACG TERM 177 268453 - 268476 + F 100 -12.4 -4.57518 | opp_overlap 268449 268453, overlap 268448 GCAGAATTGAACCCA CGTGACGGCA GCGA TGCCGCCACG TTTGATTTTTTTGTT TERM 178 268476 - 268453 - f 74 -14.6 -2.57985 | opp_overlap 268453 268448, overlap 268449 GCAGAATTGAACCCA CGTGACGGCA GCGA TGCCGCCACG TTTGATTTTTTTGTT TERM 179 269671 - 269651 - g 71 -14 -2.90194 | opp_overlap 269665 ACTTCCTGAAGCAGA GCAGCGCC GGCAA GGCGCTGC CGACCGAGGCCGACC BRADO0252 268594 - 269769 + | putative TRAP-type uncharacterized transport system TERM 180 269833 - 269806 - T 83 -12.8 -3.89822 | opp_overlap 269811, overlap 269811 GATCGATGTCAGAAA GAAAAGCCCTGC GTAC GCAGGGCTTTTT GTTTTTCGATGGCGT TERM 181 269811 - 269828 + T 100 -12.7 -5.63236 | opp_overlap 269811 269806 ATGTCAGAAAGAAAA GCCCTGC GTAC GCAGGGC TTTTTGTTTTTCGAT TERM 182 269828 - 269811 - T 100 -12.7 -4.99645 | opp_overlap 269811, overlap 269806 ATGTCAGAAAGAAAA GCCCTGC GTAC GCAGGGC TTTTTGTTTTTCGAT BRADO0253 270240 - 269896 - | hypothetical protein phhB 270744 - 270442 - | pterin-4-alpha-carbinolamine dehydratase TERM 183 270870 - 270857 - H 71 -5.3 -4.46926 | CAGGTTAGCAGAAAA CTGAT CCAG ATCAG AGCCTTGAGGCGATG TERM 184 271423 - 271398 - g 73 -9.7 -3.91716 | gap 1, overlap 271399 CGAGGTGCCAAAGAA CGCGCAG-GCCG TCG CGACGCTGCGCA AGAACGTCGCCGTGC BRADO0255 271120 - 272466 + | putative signal peptide BRADO0256 272589 - 274160 + | putative alkaline phosphatase (phoD); putative signal peptide BRADO0257 274556 - 274182 - | putative two-component response regulator TERM 185 274278 - 274257 - G 82 -11.5 -4.13767 | CGGGCGATCGGAAAA CGCCGAGGG CACG CCGTCGGCG CCATAGCCGGTGGAG BRADO0258 274724 - 275485 + | hypothetical protein BRADO0259 275567 - 276286 + | putative prolipoprotein diacylglyceryltransferase BRADO0260 276267 - 277679 + | putative Fe-S oxidoreductases TERM 186 277868 - 277886 + G 73 -12.4 -3.35774 | overlap 277863 GGGCTGTTGTGCGGC GCAGCCGG TCT CTGGCTGC TTGTCAAGGTTTCTC BRADO0261 277676 - 277909 + | mercuric transport protein (mercury ion transport protein) (fragment) BRADO0262 278131 - 278367 + | hypothetical protein BRADO0263 278390 - 278626 + | hypothetical protein BRADO0264 278637 - 279413 + | hypothetical protein TERM 187 279404 - 279422 + F 72 -2.4 -4.71318 | overlap 279409 GCCCGGACCCGCTCC TGATTCCT GAA AGCAGTCA TTGTTTTTTGGTGTT TERM 188 279472 - 279491 + F 76 -12.8 -3.45839 | CAACGCGCGAGGTCT GCCCGGTC GATT GGCCGGGC TTCCTATTTGGGGCT TERM 189 279610 - 279580 - f 73 -8.8 -3.99324 | opp_overlap 279580 TTTGACTATCATAAA GCGCGCGCCCCGCC GGG GACTGAGCACGGGC TCTTGAGAAAGCTTA TERM 190 279762 - 279737 - g 72 -8.2 -4.11692 | TACCTATCGCGAAAA CCAGCGCACG GTTGAG CGCGCGATGG ATTCCAACGATCTGG typA 279639 - 281465 + | GTP-binding protein typA/bipA (tyrosine phosphorylated protein A) TERM 191 281992 - 281973 - g 75 -4.9 -4.68593 | TTCACCATCGAAAAA TCCCGCC CGCCGT GGCGCGA CCGCGCCTATGAAGC TERM 192 281995 - 282010 + G 72 -4.6 -4.56597 | CGCCGTGGCGCGACC GCGCCT ATGA AGCCGC TTTTTCCCGCGCCGA TERM 193 282792 - 282824 + G 72 -13.3 -3.14132 | opp_overlap 282818 CGCGGCGCCTATTCG CACGCGCTTCCCGGC CAT GCCGACAAGCGCGCG TTGCTCGCCGCGCCG BRADO0266 281718 - 282965 + | putative amine oxidase BRADO0267 284002 - 283115 - | LysR family transcriptional regulator BRADO0268 284985 - 284011 - | hypothetical protein BRADO0269 285598 - 285188 - | hypothetical protein BRADO0270 286938 - 285610 - | hypothetical protein BRADO0271 287419 - 286949 - | hypothetical protein TERM 194 287803 - 287819 + H 77 -4.3 -4.86621 | opp_overlap 287793, overlap 287796 287805 CACTAGCCGGCGCCG CCGCGAC TCA GTTGCAG TTTTTCGTTCGACCT BRADO0274 287995 - 288504 + | putative N-acetyltransferase TERM 195 288587 - 288600 + F 100 -4.5 -5.42259 | AGCATGAGCTAGCAG TTGCG CGGC CGCGA TTTTTTTGCGACTGC ppa 288708 - 289244 + | inorganic pyrophosphatase TERM 196 289312 - 289344 + F 95 -16.3 -3.9243 | overlap 289314 GCCCCGATGCGGTTT CACGGCGCCGTAGGT CTG ATCTGCGGCGCCGTC TTGTTTGGGAGCTTC TERM 197 289314 - 289342 + F 100 -18.9 -3.54755 | overlap 289312 CCCGATGCGGTTTCA CGGCGCCGTAGGT CTG ATCTGCGGCGCCG TCTTGTTTGGGAGCT TERM 198 289511 - 289548 + G 72 -8.3 -4.09243 | gap 1, opp_overlap 289514, overlap 289515 AAGGCCAGCGTCGAT CAAGCGGCCGCCGCGCAG CGG CT-CGCGGAGGCGGTTCG TTTTCGCACGGTCTC TERM 199 289515 - 289544 + G 70 -9.9 -3.66908 | gap 1, opp_overlap 289514, overlap 289511 CCAGCGTCGATCAAG CGGCCGCCGCGCAG CGG CT-CGCGGAGGCGG TTCGTTTTCGCACGG BRADO0276 289439 - 290851 + | hypothetical protein folD 291732 - 290848 - | bifunctional: 5,10-methylene-tetrahydrofolate dehydrogenase; 5,10-methylene-tetrahydrofolate cyclohydrolase TERM 200 291297 - 291352 + g 80 -15.3 -3.32343 | overlap 291298 TGCTGAGGATGATGC AGCCGAGCGGCGTGCACGGC-GCCAGC GCCG GCTGGCCGCCG-GCGAGCCGGCCGGCA TTGTGCGGATGTAGG TERM 201 291298 - 291351 + g 87 -18.8 -2.59191 | overlap 291297 GCTGAGGATGATGCA GCCGAGCGGCGTGCACGGC-GCCAGC GCCG GCTGGCCGCCG-GCGAGCCGGCCGGC ATTGTGCGGATGTAG BRADO0278 292185 - 291856 - | hypothetical protein BRADO0279 292487 - 292197 - | hypothetical protein BRADO0280 293678 - 292932 - | glutamine amidotransferase TERM 202 294005 - 293951 - R 78 -9.9 -4.03234 | gap 1 TGCGCCGCAGACAAA GCCGACATCTGGGACCGTCATGTCGC GACC GCGACGCG-CGACGCCGGACGTCAGC TGCGCTTGAGCTGCA BRADO0281 294780 - 294001 - | short chain dehydrogenase/reductase family protein BRADO0282 295465 - 294998 - | hypothetical protein BRADO0283 296980 - 295604 - | putative cytochrome P450 hydroxylase superfamily proteins BRADO0284 298569 - 297202 - | putative hydrolase TERM 203 299657 - 299697 + G 82 -17.5 -2.82516 | overlap 299689 GGTGCAGCGACGGCC GCTGTCGCGCTCAGCACCG AGC CGGTGCTGACGGCGGCTGC TCTCGTCGTCGCCGG BRADO0285 298724 - 300406 + | major facilitator superfamily permease TERM 204 300531 - 300544 + T 73 -8.1 -4.0896 | CCGCTCACTGCCCGT GGTCC GTGA GGACC TTTTCGCAGGCCTTT BRADO0286 300735 - 300520 - | putative signal peptide BRADO0287 301142 - 300855 - | putative signal peptide BRADO0288 301471 - 302511 + | putative polysaccharide deacetylase TERM 205 302580 - 302548 - T 95 -15.6 -4.08216 | gap 1, opp_overlap 302554 CGACGGCTTGCAAAA CGCG-AAGGCCGGGC AGCA GCCCGGCCTTTCTCG TCTCTCGGCTGCGTC TERM 206 302554 - 302573 + T 100 -16.4 -4.04318 | opp_overlap 302548 CTTGCAAAACGCGAA GGCCGGGC AGCA GCCCGGCC TTTCTCGTCTCTCGG BRADO0289 303013 - 302603 - | putative signal peptide BRADO0290 303447 - 304025 + | hypothetical protein BRADO0291 305457 - 304048 - | hypothetical protein TERM 207 305745 - 305765 + H 81 -12.6 -3.75332 | opp_overlap 305734 AACACGCCCCGCCGC TCGCGCCA AACGA TGGCGCGA TTTGGGTTAAGCAAT BRADO0292 305866 - 306231 + | putative transposase from insertion sequence BRADO0293 306228 - 306578 + | putative IS66 Orf2 like BRADO0294 306620 - 308245 + | IS66 family transposase BRADO0295 309484 - 308732 - | putative phage protein Gp37/Gp68 TERM 208 311471 - 311440 - R 79 -13.6 -3.53012 | overlap 311441 CTTGGGGGGCTCAAA CGCCCGGCTTCGCC AAGA GGCTACGCCGGGCA CGCTTCGCTCTTCGG TERM 209 311470 - 311441 - R 75 -14.9 -2.71712 | overlap 311440 TTGGGGGGCTCAAAC GCCCGGCTTCGCC AAGA GGCTACGCCGGGC ACGCTTCGCTCTTCG BRADO0299 313708 - 311774 - | putative signal peptide;putative HemY porphyrin biosynthesis protein TERM 210 312238 - 312275 + g 70 -11.9 -3.4072 | gap 1, overlap 312240 CTGCAACCGCCGTTT CCA-CCGCCGGCTCCGGC TCG GCCGGACGCGGCGGCTCG TTGTCCTGCAGGGTC TERM 211 312240 - 312272 + g 73 -14.7 -2.86271 | overlap 312238 GCAACCGCCGTTTCC ACCGCCGGCTCCGGC TCG GCCGGACGCGGCGGC TCGTTGTCCTGCAGG BRADO0300 314862 - 313726 - | hypothetical protein TERM 212 314947 - 314976 + r 71 -8.5 -3.85817 | gap 1 CTCCTCGCGCGAGGT CGGCTCCAGATCGA TGG TCGG-CGGGGGCCG TTTCTGCCGCCCGGT BRADO0301 315809 - 315081 - | putative uroporphyrinogen-III synthase TERM 213 315570 - 315541 - G 74 -12.2 -3.5393 | opp_overlap 315545, overlap 315544 ATCACTTTTGCGAAA CCAG-CCGCGCGCG CCGC CGC-CGCGGTCTGG TCGCCGACCGCGAAC BRADO0302 315949 - 317016 + | O-sialoglycoprotein endopeptidase gpsA 317176 - 318159 + | NAD(P)H-dependent glycerol-3-phosphate dehydrogenase BRADO0304 318296 - 318709 + | hypothetical protein TERM 214 318959 - 318934 - T 100 -18.3 -4.96773 | CGAACCAAAAAGAAA GGGGCCCCAGC TTGC GCTGGAGCCCC TCAACGGTCAGGGCA amtB2 320542 - 319040 - | ammonium transporter TERM 215 319807 - 319766 - G 72 -13.6 -3.15249 | opp_overlap 319766 319765, overlap 319755 319795 GACAGCGCCCACCAA GCCGGCGATGCCGGCGTT GATGTG AACGACGGTGCCGCCGGC GAAGTCGAGAGCGCC BRADO0306 320833 - 320582 - | regulatory protein (P-II 2) for nitrogen assimilation, regulates GlnL (NRII), GlnE (ATase), and AmtB (ammonium transporter) (fragment) TERM 216 321054 - 321084 + r 74 -4.6 -4.59773 | opp_overlap 321038 321037, overlap 321047 CCGTGCCAGTCGGCT GGTCAGGGCTAATG AGC CGTGAACGCTGACC TTTTTGGCGATCCAG amtB1 322562 - 321252 - | ammonium transporter glnK1 322986 - 322648 - | regulatory protein (P-II 2) for nitrogen assimilation, regulates GlnL (NRII), GlnE (ATase), and AmtB (ammonium transporter) BRADO0309 323198 - 324073 + | hypothetical protein BRADO0310 324954 - 324079 - | putative acyl-CoA thioesterase; putative palmitoyl-CoA hydrolase BRADO0311 325116 - 326336 + | 2-octaprenyl-6-methoxyphenyl hydroxylase BRADO0312 327317 - 326394 - | putative signal peptide BRADO0313 327518 - 327321 - | hypothetical protein BRADO0314 328117 - 327575 - | putative transcriptional regulator protein BRADO0317 328965 - 328813 - | hypothetical protein BRADO0318 328985 - 329260 + | hypothetical protein BRADO0319 329271 - 330101 + | putative high-affinity Fe2+/Pb2+ permease TERM 217 330125 - 330144 + T 86 -7.1 -5.02074 | GTGCTTACTGGAGAG GCGGATC GCCCGA GGTCCGC TTTTTTGCGAGATCC BRADO0320 330788 - 330114 - | Lon family ATP-dependent protease TERM 218 330891 - 330862 - R 74 -9.9 -3.77808 | overlap 330863 GCTACGAGAACAGAA TCGTCGACAGCCG TTTG CGGCCCTCGACGG TGGCCTCGTCCGCAC TERM 219 330890 - 330863 - R 74 -13.4 -2.86203 | overlap 330862 CTACGAGAACAGAAT CGTCGACAGCCG TTTG CGGCCCTCGACG GTGGCCTCGTCCGCA BRADO0321 331768 - 330848 - | putative thioredoxin BRADO0322 333623 - 332169 - | hypothetical protein TERM 220 332881 - 332855 - G 70 -3.6 -4.56597 | overlap 332858 332859 GCGGCGGGCCAAAAA CGACCTCGCT GCCGCCG AGCGGCGTCG CCAAGAGCAGCGGCT TERM 221 333610 - 333593 - G 100 -4 -5.68023 | CGACAAGGAAAAAAA GCTGCC CGACGC GGCCGC TCACCCCACGCATGC pncB 335035 - 333731 - | nicotinate phosphoribosyltransferase BRADO0324 336482 - 335130 - | putative amidase (amiD) BRADO0326 336871 - 338148 + | putative glucose/sorbosone dehydrogenase TERM 222 338159 - 338204 + F 78 -10.3 -4.07568 | gap 1, opp_overlap 338161, overlap 338162 338162 AGTGAGCCTTTGACC AACGCGGGGCTGCGCGCTGCCA TCA TGGCGG-GCGCAGCCCCAACTA TTTTGGGCGCAGCGC TERM 223 338202 - 338161 - f 73 -12.9 -3.14564 | gap 1, opp_overlap 338159 338162 338162 TGAGCCTTTGACCAA CGCGGGGCTGCGCGCTGCCA TCA TGGCGG-GCGCAGCCCCAAC TATTTTGGGCGCAGC TERM 224 338162 - 338201 + F 81 -16.4 -2.78032 | gap 1, opp_overlap 338161, overlap 338159 338162 GAGCCTTTGACCAAC GCGGGGCTGCGCGCTGCCA TCA TGGCGG-GCGCAGCCCCAA CTATTTTGGGCGCAG TERM 225 338162 - 338202 + F 91 -16.2 -3.63744 | opp_overlap 338161, overlap 338162 338159 GAGCCTTTGACCAAC G-CGGGGCTGCGCGCTGCCA TCA TGGCGG-GCGCAGCCCCAAC TATTTTGGGCGCAGC BRADO0327 338325 - 338900 + | putative cytochrome c4 precursor panE 340037 - 339114 - | 2-dehydropantoate 2-reductase BRADO0329 340909 - 340169 - | putative acetoin(diacetyl) reductase (acetoin dehydrogenase) (AR) (meso-2,3-butanediol dehydrogenase); oxidoreductase, short chain dehydrogenase; putative short chain dehydrogenase BRADO0330 342127 - 340970 - | putative transposase; putative insertion element TERM 226 342266 - 342217 - R 78 -14.5 -3.01712 | gap 1 TCCCCGGGCTGAACA GCAGCGAAGCAATCC-AGAGTC GTAAGCG GAGCCTTGGATCGCTTCGCTGC GTGCGCGATGTCGAG BRADO0331 342891 - 342283 - | putative 2-hydroxychromene-2-carboxylate isomerase TERM 227 342368 - 342398 + g 73 -14 -3.21395 | opp_overlap 342355 342358, overlap 342366 342373 AAGAAGGTCGGCGAG CCGAACGCGCCG CGCTCGA CGGCGCGTTGGG TGTTCTCGACCAGCT TERM 228 342925 - 342951 + r 100 -17.2 -3.96624 | GTTTTGCGCATTGTG GCCCGGGGCGCC GGC GGCGTCCAGGGC TTTATGATGACCATC BRADO0332 344354 - 342999 - | putative multi anti extrusion protein (MatE) BRADO0333 345052 - 344471 - | hypothetical protein BRADO0334 345214 - 345879 + | putative glutathione S-transferase III (GST-III) BRADO0335 347289 - 345883 - | putative beta-lactamase ggt 349169 - 347463 - | gamma-glutamyltranspeptidase precursor TERM 229 348523 - 348477 - G 80 -15.7 -3.28712 | gap 1, opp_overlap 348495, overlap 348478 CGGGCCCTCGTAGAA GCCGCGCGGACCCCGCTCGGCG ATGG CGGCGAGCGTGG-CCGCGAGGT CGCGCTGCACCAGCC TERM 230 348522 - 348478 - G 93 -19.2 -2.57132 | gap 1, opp_overlap 348495, overlap 348477 GGGCCCTCGTAGAAG CCGCGCGGACCCCGCTCGGCG ATGG CGGCGAGCGTGG-CCGCGAGG TCGCGCTGCACCAGC TERM 231 349331 - 349285 - H 72 -7.2 -4.18018 | gap 2, overlap 349312 GTTGCCGACGTAAAA CGCGACCCCGTGATCGTCGCAC GAAAA GCGAGGCGATCGCGGG--CGCG GGGCAATGGCGAGAT BRADO0337 349361 - 350764 + | major facilitator transporter purH 352432 - 350840 - | bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase TERM 232 351011 - 350999 - G 71 -3.3 -4.66833 | opp_overlap 351000, overlap 351000 GGCGAACGGGAAAAA CGCGT CGG AGGCG ACCACCGAGCCCTTG TERM 233 351952 - 352007 + g 90 -18.2 -3.61398 | opp_overlap 351924 CGTGCCGCGCGAGAT CCTCGAGCACGGCCTCGTAGTCGTCG ACGT CGACGACGACGGCGACGTCCTCGTGG TTCTTGGACGCCGCG TERM 234 352363 - 352331 - G 71 -12.1 -3.25823 | gap 2, overlap 352332 GCCGGTGGAGATCAA TTCGACGCCGCGCGC GGCGA GCGCGCG-CG-CGAA GTCGGTCAGGCGGGT BRADO0339 354599 - 352908 - | hypothetical protein BRADO0340 356221 - 354869 - | putative ribosomal RNA small subunit methyltransferase B (rRNA (cytosine-C(5)-)-methyltransferase) (16S rRNA m5C967 methyltransferase)(rsmB) BRADO0341 356456 - 356647 + | hypothetical protein BRADO0342 357167 - 356706 - | hypothetical protein TERM 235 357375 - 357342 - R 100 -16.7 -4.40894 | overlap 357345 357347 TAAATGACATGAAAA CAACACTCCCGCGGA ATCA TCCGCGGGAGGGCCG TTGCGCTTGACGCGT TERM 236 357372 - 357345 - R 100 -17 -4.29905 | overlap 357342 357347 ATGACATGAAAACAA CACTCCCGCGGA ATCA TCCGCGGGAGGG CCGTTGCGCTTGACG TERM 237 357370 - 357347 - R 100 -18.2 -3.74088 | overlap 357345 357342 GACATGAAAACAACA CTCCCGCGGA ATCA TCCGCGGGAG GGCCGTTGCGCTTGA acsA 359369 - 357417 - | acetyl-CoA synthetase BRADO0345 359749 - 360936 + | putative -like DNA topoisomerase I BRADO0346 361275 - 360949 - | hypothetical protein TERM 238 361011 - 360991 - G 77 -11.1 -3.89346 | opp_overlap 361008 GGCCGACGCCAGAAA GCGCGCGAT CGG ATCGAGCGC CTTGCAGGACGCCGC BRADO0348 361787 - 362341 + | hypothetical protein TERM 239 362408 - 362432 + F 100 -18.6 -4.83615 | CGGATGTGACCACGA GCGAGCCGGG CCCAC CCCGGCTCGC TTTTTGTGAGAGCTA BRADO0349 362552 - 363181 + | hypothetical protein BRADO0350 363196 - 363978 + | putative oxidoreductase molybdopterin binding TERM 240 364105 - 364139 + T 100 -10.7 -5.00616 | gap 1 CCTCGATAGCTTCCG CGGTATGGGTCCCGGC GTTC GCCGGGACG-ACACCG TTTTTTAGGCCCGGC BRADO0351 365340 - 364144 - | major facilitator superfamily permease leuB 365614 - 366726 + | 3-isopropylmalate dehydrogenase TERM 241 366996 - 367013 + T 71 -8.3 -3.92592 | GGGTCTCCACCGCGT GAGCCCC GCTC GGGGCGC TTTCATCTTCCGAAT TERM 242 368165 - 368146 - T 100 -16.4 -4.82667 | opp_overlap 368146 GCAGGACAGCAAAAA GGCCGGGC GAAA GCCCGGCC TTGGTGATCGGATGA TERM 243 368146 - 368165 + T 86 -16.4 -3.21747 | opp_overlap 368146 GCAGGACAGCAAAAA GGCCGGGC GAAA GCCCGGCC TTGGTGATCGGATGA BRADO0356 368572 - 368192 - | hypothetical protein TERM 244 368666 - 368712 + r 71 -13 -3.06183 | opp_overlap 368693 GTGGCATCACAAGGT CATTCCCGCGACGGCCGCAA AGATAAA TTCCGGCTGTGGCGGGAAAG TTGCATCAAAATCCG TERM 245 368710 - 368693 - R 71 -5.5 -4.32857 | opp_overlap 368666 GGCCGCAAAGATAAA TTCCGGC TGTG GCGGGAA AGTTGCATCAAAATC BRADO0357 369601 - 368798 - | hypothetical protein TERM 246 369382 - 369368 - G 72 -7 -4.18494 | CAGCCGCAGCGAAAA GGCGGG TGT CGCGCC GTCAGCAACCGTCCA TERM 247 369996 - 369953 - g 71 -12.4 -3.33815 | gap 1 ACGGTCTCGAAGGAA TGGTCGCCGAAGATCGGCGCC GCA GGCGCCG-TCGTCATCGACAA CTCCTCGGCTTGGCG asd 369716 - 370750 + | aspartate-semialdehyde dehydrogenase BRADO0359 371068 - 371628 + | hypothetical protein BRADO0360 372354 - 371710 - | putative carbonic anhydrase 2 (carbonate dehydratase 2)(cynT) TERM 248 371862 - 371881 + g 73 -12.8 -3.35996 | TCATCAGATTCTCCA GGCTGCGG AACA CCGCGGCC TTCTCGATCCGGGTG TERM 249 373243 - 373223 - g 80 -9.7 -4.17023 | CGAACTACCCGAAAA TGCATCGCG CGG CGCGATCCA GATCGACGGCCGCAT BRADO0361 372456 - 373334 + | putative citrate lyase beta chain (Citrase beta chain) (citrate (pro-3S)-lyase beta chain) (Citryl-CoA lyase subunit) (citE) BRADO0362 373727 - 373356 - | putative cytochrome c precursor (cytochrome c552)(cycB) BRADO0363 374183 - 373767 - | hypothetical protein BRADO0364 375080 - 374283 - | hypothetical protein TERM 250 375137 - 375115 - R 100 -20.6 -3.90922 | opp_overlap 375125 375128 ATGCTCTCGAAACAA GGCCCCGGAC GAG GTCCGGGGCC CGCGAACTCTGTGCT leuD 375777 - 375166 - | isopropylmalate isomerase small subunit TERM 251 375193 - 375217 + g 70 -6.4 -4.17762 | gap 1 GCGCTCGGCGAGCTT GGCCTCGTAGC TGTC GAT-CGAGGCC TTCTTTTCCAGCGTC TERM 252 375521 - 375494 - G 72 -12 -3.57462 | gap 1, overlap 375495 CAGCGGATGCCGAAA TCGAGCAGCGCCC AGG GGGCG-TGCTCGC GGCTCGAGCCGCAGC TERM 253 375520 - 375495 - G 75 -15.5 -2.74263 | gap 1, overlap 375494 AGCGGATGCCGAAAT CGAGCAGCGCCC AGG GGGCG-TGCTCG CGGCTCGAGCCGCAG BRADO0366 376257 - 375862 - | hypothetical protein BRADO0367 376409 - 376738 + | hypothetical protein BRADO0368 377067 - 377282 + | hypothetical protein TERM 254 377309 - 377337 + F 83 -14.5 -3.40403 | opp_overlap 377313, overlap 377313 GATGATGATCGACAT CAAACAGGCCCGC TCT GCGGGCCTGTACG TTATGGTGGGCCGGG TERM 255 377313 - 377333 + F 86 -18.3 -2.61548 | opp_overlap 377313, overlap 377309 ATGATCGACATCAAA CAGGCCCGC TCT GCGGGCCTG TACGTTATGGTGGGC TERM 256 377333 - 377313 - f 100 -18.3 -3.85092 | opp_overlap 377309 377313 ATGATCGACATCAAA CAGGCCCGC TCT GCGGGCCTG TACGTTATGGTGGGC TERM 257 377688 - 377677 - f 72 -7.2 -4.20516 | overlap 377678 CGCTCAGCGAATAAA GCGC GGGC GCGC ACCAGAAGCACCGCA BRADO0372 377999 - 378661 + | hypothetical protein TERM 258 378688 - 378711 + T 78 -14.6 -3.00525 | opp_overlap 378688 378687 378690, overlap 378691 GGTGATCGAGACAAC GAGGGACGCC CCAG GGCGTCCTTC TCTCGTTTCAGGGCA TERM 259 378691 - 378708 + T 77 -12.7 -3.6471 | opp_overlap 378690 378688 378687, overlap 378688 GATCGAGACAACGAG GGACGCC CCAG GGCGTCC TTCTCTCGTTTCAGG BRADO0373 378951 - 378736 - | hypothetical protein TERM 260 378983 - 379014 + r 72 -11.6 -3.35679 | gap 1 GGCTCCTCGGCACGT TCCT-CTGCGGACGC GAT GCGTCAGCGGTAGGA TTGTGCGTGAGGAGC TERM 261 379105 - 379078 - R 100 -19.2 -4.55798 | opp_overlap 379078 GAGTCGAAATGAAAA TGCGGCGGCTCC TTCT GAAGCCGCCGCA TTCCTTATAGATCGG TERM 262 379078 - 379105 + r 93 -17 -3.45945 | opp_overlap 379078 GAGTCGAAATGAAAA TGCGGCGGCTCC TTCT GAAGCCGCCGCA TTCCTTATAGATCGG leuC 380562 - 379156 - | isopropylmalate isomerase large subunit TERM 263 380854 - 380905 + r 81 -15.4 -3.05384 | gap 2, opp_overlap 380859 380864 380868, overlap 380860 380864 380868 TCTCCGTCATTGCGA GCGAAGCGAAGCAATCCAGGGGCT GAGCAA GGACCCTGGATTGCTTCG-T-CGC TTCGCTCGCAAGGAC TERM 264 380902 - 380859 - R 81 -15.4 -3.06183 | opp_overlap 380854 380860 380864 380868, overlap 380864 380868 GTCATTGCGAGCGAA GCGAAGCAATCCAGGGGC TGAGCAAG GACCCTGGATTGCTTCGT CGCTTCGCTCGCAAG TERM 265 380860 - 380901 + r 90 -19.6 -2.54896 | opp_overlap 380859 380864 380868, overlap 380854 380864 380868 TCATTGCGAGCGAAG CGAAGCAATCCAGGGGCT GAGCAA GGACCCTGGATTGCTTCG TCGCTTCGCTCGCAA TERM 266 380864 - 380897 + r 73 -13.2 -3.22388 | opp_overlap 380859 380864 380868, overlap 380860 380854 380868 TGCGAGCGAAGCGAA GCAATCCAGGGGCT GAGCAA GGACCCTGGATTGC TTCGTCGCTTCGCTC TERM 267 380897 - 380864 - R 73 -12.5 -3.19192 | opp_overlap 380864 380860 380854 380868, overlap 380859 380868 TGCGAGCGAAGCGAA GCAATCCAGGGGC TGAGCAAG GACCCTGGATTGC TTCGTCGCTTCGCTC TERM 268 380941 - 380959 + r 95 -13.1 -4.2828 | opp_overlap 380941 AGCAAAACAAAAAAA GCGCGGG GCCAG CCCGCGC TTTTCGTCAATCCAA TERM 269 380959 - 380941 - R 100 -13.1 -6.11229 | opp_overlap 380941 AGCAAAACAAAAAAA GCGCGGG GCCAG CCCGCGC TTTTCGTCAATCCAA rplS 381373 - 380987 - | 50S ribosomal protein L19 TERM 270 381494 - 381507 + r 72 -2.3 -4.68994 | TGTCACCCGTCTGTC GTGCT TTTT GGCGC TTTTTGGCTGGTCCT trmD 382254 - 381481 - | tRNA (guanine-N(1)-)-methyltransferase TERM 271 382379 - 382352 - R 74 -12.6 -3.28712 | TGTCGTCCCGGACAA GCCGTGACGCGC ATCA GCGCGTCGCCGC GCCGATCCGGGACCC rimM 383057 - 382458 - | 16S rRNA processing protein, putative function rpsP 383515 - 383183 - | 30S ribosomal protein S16 TERM 272 383576 - 383627 + r 75 -13.9 -3.09635 | gap 2, opp_overlap 383581 383586 383590, overlap 383582 383586 383590 AAGTCGTCATTGCGA GCGAAGCGAAGCAATCCAGGGCGGC ACGC GCGACTCTGGATTGCTTCG--TCGC TTCGCTCCTCGCAAT TERM 273 383624 - 383581 - R 78 -14.6 -3.06183 | opp_overlap 383576 383582 383586 383590, overlap 383586 383590 GTCATTGCGAGCGAA GCGAAGCAATCCAGGGCGGC ACGC GCGACTCTGGATTGCTTCGT CGCTTCGCTCCTCGC TERM 274 383582 - 383623 + r 86 -18.1 -2.55544 | opp_overlap 383581 383586 383590, overlap 383576 383586 383590 TCATTGCGAGCGAAG CGAAGCAATCCAGGGCGGC ACGC GCGACTCTGGATTGCTTCG TCGCTTCGCTCCTCG TERM 275 383586 - 383619 + r 70 -11.7 -3.22388 | opp_overlap 383586 383581 383590, overlap 383582 383576 383590 TGCGAGCGAAGCGAA GCAATCCAGGGCGGC ACGC GCGACTCTGGATTGC TTCGTCGCTTCGCTC TERM 276 383619 - 383586 - R 70 -11.7 -3.19192 | opp_overlap 383582 383576 383586 383590, overlap 383581 383590 TGCGAGCGAAGCGAA GCAATCCAGGGCGGC ACGC GCGACTCTGGATTGC TTCGTCGCTTCGCTC ffh 385203 - 383656 - | signal recognition particle protein TERM 277 385737 - 385768 + G 76 -15.8 -2.93723 | overlap 385733 GCATGCGGATACCCC GCCGCACCGGATCG AGGG CGAGACGGTGCGGC TGTCGTTCATCGGCC BRADO0380 385555 - 386547 + | putative metallo-hydrolase/oxidoreductase BRADO0381 387472 - 386759 - | hypothetical protein BRADO0382 388212 - 387478 - | hypothetical protein dapF 388384 - 389253 + | diaminopimelate epimerase BRADO0384 389250 - 390581 + | putative MiaB-like tRNA modifying enzyme BRADO0385 391580 - 390678 - | putative RNA pseudouridine synthase (Uracil hydrolyase) TERM 278 390727 - 390756 + g 79 -10.6 -3.9461 | TCATGCATGTGCAGC GGCGCCGGCGCA ACCACC TGCACCGGCGGC TTGTTCTTCGAGAGC ftsY 391640 - 392587 + | cell division transporter substrate-binding protein FtsY (Signal recognition particle receptor) TERM 279 392787 - 392817 + G 77 -15.4 -2.95298 | GACTGGCGCCTTCAT GGTCGCGATCATCG CGG CGCTGATCGCGTCC TATGTCGTGACTAGG BRADO0387 392671 - 393273 + | intracellular septation protein A TERM 280 393539 - 393558 + T 72 -7.9 -4.20783 | opp_overlap 393552 GGGTGGACGGACAGC TTGCTCG AAATGA CGAGCAA TTTATTGGCTCGCAT ccmG 394178 - 393582 - | periplasmic thioredoxin (cytochrome c biogenesis) ccmD 394354 - 394175 - | heme exporter protein D (cytochrome c biogenesis protein) ccmC 395132 - 394356 - | heme ABC transporter (heme exporter protein C), permease protein (cytochrome c biogenesis) ccmB 395893 - 395225 - | heme ABC transporter (heme exporter protein B), permease protein (cytochrome c biogenesis) TERM 281 395420 - 395404 - G 83 -9.3 -4.30576 | GCGGCAGGACCAAAA CGGCCAG CAG CAGGCCG CCACGGGACATCGTC ccmA 396724 - 396101 - | cytochrome c biogenesis protein CcmA TERM 282 398136 - 398152 + G 75 -9.3 -4.07687 | GGCCGCATCGCGCTC CCCGCGG TGG CCGAGGG TTTTGCGACCGCGCT acnA 396933 - 399668 + | aconitate hydratase TERM 283 399716 - 399756 + F 100 -14.9 -4.28375 | gap 1, opp_overlap 399723, overlap 399723 GAAGTGAGTGGCGGG TGATGAAGGAGGCGGCCT ATGACA AGGCCGCCTCCTTTG-CA TTTTCGGTCTGTTAA TERM 284 399750 - 399723 - f 91 -18.5 -3.14132 | opp_overlap 399716 399723 GTGGCGGGTGATGAA GGAGGCGGCCT ATGACA AGGCCGCCTCC TTTGCATTTTCGGTC TERM 285 399723 - 399750 + F 100 -18.5 -3.9373 | opp_overlap 399723, overlap 399716 GTGGCGGGTGATGAA GGAGGCGGCCT ATGACA AGGCCGCCTCC TTTGCATTTTCGGTC TERM 286 399871 - 399881 + G 76 -8.2 -4.17296 | GATGTCGTGGTGGTC GCGC GCG GCGC TTTGTGTCTGTGCGG TERM 287 400512 - 400497 - g 73 -6 -4.36914 | opp_overlap 400504, overlap 400498 TGCCGCTGGAGAAAA TCGCCC GCGA GGGCGT CGATGGCGCGGTCGT BRADO0394 399857 - 400597 + | hypothetical protein TERM 288 400727 - 400697 - f 95 -11.3 -4.56597 | gap 1, opp_overlap 400703 400717, overlap 400703 TGCTGTCGCCAAAAA GCAAAAGGACCAAC TCGC GTTGGCCC-TTTGC CATTACTTGTGAATA TERM 289 400722 - 400703 - f 100 -10 -4.77757 | opp_overlap 400703 400717, overlap 400697 CGCCAAAAAGCAAAA GGACCAAC TCGC GTTGGCCC TTTGCCATTACTTGT BRADO0395 401015 - 401380 + | hypothetical protein pat 401937 - 401410 - | phosphinothricin acetyltransferase (PPT N-acetyltransferase) TERM 290 402246 - 402267 + r 88 -14.4 -3.68827 | opp_overlap 402246 TTCCCGAAAAGAAAA GCCCCGGC GGTGAG GCCGGGGC TTTGAATCGTCGCTC TERM 291 402267 - 402246 - R 100 -14.4 -5.07652 | opp_overlap 402246 TTCCCGAAAAGAAAA GCCCCGGC GGTGAG GCCGGGGC TTTGAATCGTCGCTC BRADO0397 403092 - 402301 - | putative transport protein; putative membrane protein BRADO0398 405942 - 403372 - | putative ABC transporter, permease protein TERM 292 404728 - 404692 - G 72 -12.9 -3.14132 | GGTGCCCGCGATCAA CGCCAGATAGCTCCAGC GCG GCCGGTGCCATTCGGCG ATGACCGCCTCGCGA BRADO0399 406646 - 405939 - | putative ABC transporter, ATP-binding protein tesA 406729 - 407361 + | multifunctional: acyl-CoA thioesterase I; protease I; lysophospholipasel(I) TERM 293 407999 - 408009 + G 76 -8.2 -4.25104 | GGTCCGCGGCTACTT CCCG AGC CGGG TTTTCATGGCCGAGC BRADO0401 407568 - 408107 + | putative 2'-5' RNA ligase BRADO0402 408263 - 409444 + | AFG1 family ATPase mdh 409671 - 410639 + | malate dehydrogenase TERM 294 410716 - 410675 - f 88 -16.9 -3.01712 | gap 1, opp_overlap 410672 410673 GGCCCGCTCCGAAGA GTTGCAGGATGCTTGGTATA TGG TATACCAAGCATCC-GCAAA ACACTTATAGACGTC sucC 410766 - 411962 + | succinyl-CoA synthetase subunit beta sucD 412018 - 412902 + | succinyl-CoA synthetase, alpha subunit, NAD(P)-binding kgd 413007 - 416000 + | alpha-ketoglutarate decarboxylase TERM 295 416064 - 416109 + F 81 -12.1 -3.85698 | gap 3 TCCATCGCGTTGATC GTCCGTACCG-CATCG-CTTGC TCGCC GCAAGGCGATGGCGG-ACGGGC TTTATGACCGCACGG TERM 296 416416 - 416374 - g 71 -13.9 -2.81547 | overlap 416371 CGGCCAGATCAATGA CGGCGCGGCCGCTGCCAAG CCGGC CGCCGCTGCGCCCGCGCCG GCTCCGGCAAAGCCC TERM 297 416477 - 416428 - g 70 -11.3 -3.53012 | gap 2 GCCGGCTCCGGCAAA GC-CCGCCGCGG-CGGCTCCGGC TCCCGC GCCGGCGCCGGCCAAGGCGCTGC CGGCCGATACGCCGC sucB 416144 - 417385 + | dihydrolipoamide acetyltransferase TERM 298 417436 - 417408 - f 72 -13.9 -2.78596 | overlap 417395 GACGCCTTGACGACA CGAGGCGCGCT TCCCAAG AGCGCGCCTCA GACCTAACGGGGCCA BRADO0408 417454 - 418200 + | oxidoreductase lpd 418246 - 419649 + | dihydrolipoamide dehydrogenase BRADO0410 419750 - 420319 + | hypothetical protein TERM 299 420367 - 420410 + T 91 -20.4 -2.6381 | gap 1 CCATCGCCGTTATTC CGGG-GCAATCGTCAGAGCGC AAA GCGCGCTGACGATTGAACCCG TAATCTCGCGATTGT BRADO0411 421117 - 420527 - | hypothetical protein xerC 422182 - 421199 - | site-specific tyrosine recombinase XerC TERM 300 421404 - 421353 - G 75 -14.3 -3.33696 | gap 1, overlap 421339 421354 TGCGTCGCGAAGGAA TGGCGCAGCGCGTGCGGCGTGGCG CTGTC CGGCAGGCCGAGCGCGCCGCG-CA GCCGCTCCATCGCCA TERM 301 421404 - 421354 - G 74 -15.9 -2.60075 | overlap 421339 421353 GCGTCGCGAAGGAAT GGCGCAGCGCGTGCGGCGTGGCG CTGTC CGGCAGGCCGAGCGCGCCGCGCA GCCGCTCCATCGCCA TERM 302 422292 - 422348 + H 93 -20.2 -3.07291 | gap 1, opp_overlap 422298, overlap 422339 CTTCGATGCGGCAGC ATCGAAGCCGGGTGAGGGGTCTGCATC CGCG GAGACAGACCCCTCACCCGGCG-CGAA TTCGCTCCGCTCATT TERM 303 422343 - 422298 - H 100 -29.9 -3.09516 | opp_overlap 422292 422339 TGCGGCAGCATCGAA GCCGGGTGAGGGGTCTGCATC CGCG GAGACAGACCCCTCACCCGGC GCGAATTCGCTCCGC priA 422525 - 424735 + | primosome assembly protein PriA TERM 304 424768 - 424817 + T 91 -19.4 -3.09635 | opp_overlap 424776 424780, overlap 424772 424776 424780 GACGTCATTGCGAGC GCAGCGAAGCAATCCAGGGGCC GGGGTG GGACTCTGGATTGCTTCGTCGC TTCGCTCCTCGCAAT TERM 305 424772 - 424813 + T 90 -19.6 -2.55544 | opp_overlap 424776 424780, overlap 424768 424776 424780 TCATTGCGAGCGCAG CGAAGCAATCCAGGGGCC GGGGTG GGACTCTGGATTGCTTCG TCGCTTCGCTCCTCG TERM 306 424776 - 424809 + T 73 -13.2 -3.22388 | opp_overlap 424776 424780, overlap 424772 424768 424780 TGCGAGCGCAGCGAA GCAATCCAGGGGCC GGGGTG GGACTCTGGATTGC TTCGTCGCTTCGCTC BRADO0414 425400 - 424855 - | putative rare lipoprotein A (RlpA-like); putative secreted protein atpH 426115 - 426612 + | F0F1 ATP synthase subunit delta atpA 426612 - 428141 + | F0F1 ATP synthase subunit alpha atpG 428298 - 429176 + | F0F1 ATP synthase subunit gamma atpD 429266 - 430708 + | F0F1 ATP synthase subunit beta TERM 307 430726 - 430762 + F 83 -15.4 -3.19463 | gap 1, opp_overlap 430724 430719 GGCGAATAGCGAAGC GGGAGTAGCGAAT-AGA ACGA TCTCATTCGCTGCTCCC TTCCTCCCTACTCGC atpC 430809 - 431216 + | F0F1 ATP synthase subunit epsilon TERM 308 431248 - 431268 + F 100 -18.3 -4.34402 | opp_overlap 431242 431239 CTAAACGGATATTCA TGGCCGGGC TTT GCCCGGCCA TTTTCGTCTCCGGGC TERM 309 431334 - 431352 + F 72 -11.6 -3.29461 | opp_overlap 431323, overlap 431335 GAAAGCCGGTTGCGC GGCCGCCG ATC CGGCGGCA TTCTCCCGGCCGTTC TERM 310 431335 - 431351 + F 77 -15.1 -2.57463 | opp_overlap 431323, overlap 431334 AAAGCCGGTTGCGCG GCCGCCG ATC CGGCGGC ATTCTCCCGGCCGTT TERM 311 432087 - 432109 + G 78 -14.8 -3.28712 | CGGATGCCGCCAAGT CCGCGGCGGC GGC GCTGTCGCGG TTGTCGGCGAAGCCG BRADO0421 431384 - 433051 + | putative adenylate cyclase nudH 433858 - 433349 - | dinucleoside polyphosphate hydrolase nudH 434490 - 433984 - | dinucleoside polyphosphate hydrolase TERM 312 434524 - 434580 + r 76 -5.8 -4.55128 | gap 2, opp_overlap 434534, overlap 434530 434535 434538 CGTTGCCCCGCCCCG TCGCGACAGACCCCGCGTCACGTCGCCG CCG CGGTGGCGT-ACGCTCGTTCAGTT-CGA TTTTGATTTCAGCAT BRADO0424 435789 - 434572 - | hypothetical protein TERM 313 435920 - 435901 - R 100 -16.4 -4.20806 | GACGCCAAAAGCAAA GGGCGGCC CTAA GGCCGCCC CTCAAACCGAATGCG ctpA 437264 - 436005 - | carboxy-terminal-processing protease precursor (C-terminal-processing protease) BRADO0426 438718 - 437348 - | hypothetical protein BRADO0427 439240 - 438752 - | hypothetical protein BRADO0428 439577 - 439281 - | plant iojap-like protein nadD 440534 - 439956 - | nicotinic acid mononucleotide adenylyltransferase TERM 314 440268 - 440244 - G 78 -14.9 -3.28416 | CATGATCCACACGAA GCGCAGGCGCG AGG CACGCCGGCGC AGATAATCGATGGTG proA 441935 - 440646 - | gamma-glutamylphosphate reductase proB 443150 - 442014 - | gamma-glutamyl kinase obgE 444354 - 443284 - | GTPase ObgE BRADO0433 444556 - 445473 + | DMT family permease BRADO0434 446216 - 445629 - | putative acetyltransferase TERM 315 446290 - 446265 - R 100 -16.1 -4.56914 | TCAGCGAAATGAAAA GGGGAGGCCGG TTGT CCCGCCTCCCC TGGAGCCATCTGGCG TERM 316 446304 - 446337 + r 77 -14.6 -2.90392 | gap 1, overlap 446300 446327 CCTGGAGCCATCTGG CGC-TCCGCCGGTTC GTCAG GACCCGGCGGACGCG TATCGTTCCACCGTA rpmA 446624 - 446355 - | 50S ribosomal protein L27 rplU 447143 - 446751 - | 50S ribosomal protein L21 TERM 317 447323 - 447271 - H 95 -9.8 -4.66953 | opp_overlap 447274, overlap 447283 447286 447287 TCAAGACCTCAAAAA TGGGCGCAACGA-CAATCGGCGCGAG AAG CTCGCGCCGGTCGATCGA-GCGCTTA TAGCGGCCTGCAAGC TERM 318 447274 - 447320 + H 84 -15.9 -3.29511 | opp_overlap 447271 447283 447286 447287 AGACCTCAAAAATGG GCGCAACGA-CAATCGGCGCGAG AAG CTCGCGCCGGTCGATCGA-GCGC TTATAGCGGCCTGCA TERM 319 447311 - 447283 - H 81 -16.7 -2.7186 | opp_overlap 447274, overlap 447271 447286 447287 AAATGGGCGCAACGA CAATCGGCGCGAG AAG CTCGCGCCGGTCG ATCGAGCGCTTATAG TERM 320 447308 - 447286 - H 83 -14.8 -3.50853 | opp_overlap 447274, overlap 447283 447271 447287 TGGGCGCAACGACAA TCGGCGCGAG AAG CTCGCGCCGG TCGATCGAGCGCTTA TERM 321 447307 - 447287 - H 86 -18.3 -2.70298 | opp_overlap 447274, overlap 447286 447283 447271 GGGCGCAACGACAAT CGGCGCGAG AAG CTCGCGCCG GTCGATCGAGCGCTT BRADO0437 447422 - 448606 + | putative glucokinase TERM 322 448673 - 448654 - f 73 -6.4 -4.30809 | opp_overlap 448664 448665 CAACATCCAGTAAAA TTGCGACC AGGT GTTCGCAA CGTGCGAAAAATTGT TERM 323 449218 - 449231 + F 72 -2.3 -4.70879 | opp_overlap 449218 ACTCGTTCCCAGAAT CCGCA TTGA TGAGG TTTTTACGGTTTGAA TERM 324 449342 - 449365 + F 71 -13.8 -2.55351 | overlap 449341 CCACTTCCCCATCCG CTCGGGGGGC CGCC GCCCGCCGAG GTTAATCTCCCGCGA BRADO0438 450121 - 450939 + | hypothetical protein BRADO0439 450949 - 451845 + | hypothetical protein TERM 325 453202 - 453235 + G 88 -10.1 -4.36914 | overlap 453202 453203 453203 CGGAGGCGGATTATG CCGCGGAGGTCGCGC AGCT GCGCGCCTTCGGCGA TTTTCTGCGCGACGA TERM 326 453203 - 453234 + G 73 -13.6 -3.21934 | overlap 453202 453202 453203 GGAGGCGGATTATGC CGCGGAGGTCGCGC AGCT GCGCGCCTTCGGCG ATTTTCTGCGCGACG BRADO0441 452568 - 453899 + | putative ABC1 protein (chaperonin) TERM 327 453923 - 453942 + G 72 -11.4 -3.5393 | gap 1, opp_overlap 453911 CTACCGATCGCCACC CGCGCG-GC AGG GCTCGCGCG TTTGCAGACGGTGCT TERM 328 454376 - 454410 + G 71 -2.7 -4.57482 | gap 1, overlap 454378 454402 454405 GCCTCGCTGTGGATC TTCACGCTCGGCCTGC CCTG GCGGCTCG-GCGCGGA TTTCTTTCTGCGTCA BRADO0442 453896 - 455116 + | putative deoxyribodipyrimidine photo-lyase TERM 329 455426 - 455390 - g 71 -12.2 -3.28712 | gap 1, opp_overlap 455381 GGTGCTGTTCGACAA GGGCCGCGC-GCCAGGC GGAC GACTGGCAACGCGGCGC GCGGAGGACTTTCAG BRADO0443 455271 - 455798 + | hypothetical protein BRADO0444 455802 - 456224 + | hypothetical protein BRADO0445 457489 - 456314 - | putative oxidoreductase /dehydrogenase protein BRADO0446 458557 - 457502 - | putative xylose isomerase-like TERM 330 459427 - 459378 - g 70 -9.8 -3.71848 | overlap 459379 459381 GGTGGCGATGAAGAA GGATCGCGACCAGGCCAACGCC TCGACC GGCCGCGGCCTGGTCGTGCTCA AGACCTCGGTGGTCG BRADO0447 458857 - 459603 + | hypothetical protein BRADO0448 459698 - 460270 + | putative acetyltransferase TERM 331 460810 - 460777 - g 80 -14.5 -3.35679 | gap 1 TTGCGGCACCTACAA CCGCATCGCCGCGGCG ATC CGCCGCG-CGGCGCAG GCCTGAGGAGACCGG iorA 460382 - 460816 + | isoquinoline 1-oxidoreductase alpha subunit TERM 332 462523 - 462533 + G 72 -8.2 -4.07568 | overlap 462522 GGATCCCTATCAGCT GCGC CTC GCGC TTTTGCAGGACAGAC BRADO0450 460829 - 463066 + | putative isoquinoline 1-oxidoreductase beta subunit (iorB-like) TERM 333 463068 - 463108 + T 74 -11.9 -3.39895 | gap 1, opp_overlap 463074, overlap 463069 AGCTCGGCGTCTGAG ACGAG-AGCATCCCGGCA CAAGCC TGCCGGGATGCCGCTCGA TTACTTGCTGAGAAA TERM 334 463069 - 463107 + T 77 -15.4 -2.63723 | gap 1, opp_overlap 463074, overlap 463068 GCTCGGCGTCTGAGA CGAG-AGCATCCCGGCA CAAGCC TGCCGGGATGCCGCTCG ATTACTTGCTGAGAA TERM 335 463101 - 463074 - T 87 -17.1 -2.85351 | opp_overlap 463069 463068 GCGTCTGAGACGAGA GCATCCCGGCA CAAGCC TGCCGGGATGC CGCTCGATTACTTGC BRADO0451 463927 - 463109 - | putative alpha/beta hydrolase BRADO0452 464974 - 464006 - | bifunctional glutamine amidotransferase-like/transcriptional regulator protein BRADO0453 465097 - 465891 + | putative oxidoreductase protein TERM 336 466789 - 466824 + G 74 -2.5 -4.82901 | gap 1, opp_overlap 466780 466783, overlap 466782 466790 GATCAACGACGCCGA TCGAAT-CCGCGGGTT CATCA ATCCCTCGGGATTCGC TTTTTCTCCCGAGCG BRADO0454 465995 - 466903 + | hypothetical protein TERM 337 467335 - 467319 - f 93 -7.3 -5.14563 | opp_overlap 467319 CGCCGGACCAAAAAA CCAATCA ATC TGACTGG TTAGTACTGGCGCAC TERM 338 467663 - 467652 - f 77 -4.4 -4.84311 | TTGCATAGAACAAAA GCTT AACG AAGC GCTGCTACTAGCCAA TERM 339 468961 - 468979 + G 79 -8.8 -4.36914 | CGTCGTGGGAGGCGG CGGAGCAA GCC TTGCGCCG TTTTCTGCAACAGCG BRADO0456 467682 - 469013 + | hypothetical protein BRADO0458 469673 - 469828 + | hypothetical protein TERM 340 471081 - 471050 - f 73 -10.9 -3.54543 | opp_overlap 471049 ACCGATCTGCGCAAA CGCTCG-GCCGAGGC GGAG GCC-CGGCTCAAGCG CCTTTACGACGCCGT TERM 341 471392 - 471375 - f 86 -8.4 -4.54047 | TTATGGGAGACAAAA GCGTGC TCCTGC GCACGC TGGCCGCCGGGTTCA TERM 342 471992 - 471979 - g 75 -9.5 -4.12188 | CGAGTATCTTGAAAA GGCCG AGCG CGGCC TGATCCTGACCCGTG TERM 343 472736 - 472750 + G 91 -11.4 -4.18018 | TCGTACAGCTCGACC GCCGAG GAT CTCGGC TTTTCAATCCCGACA BRADO0462 471638 - 472927 + | putative phage related integrase TERM 344 473513 - 473534 + G 70 -3.7 -4.57073 | gap 1 TCCTGTCTCTGGGTG CGC-AGGGAG GAT CTTCTTAGCG TTTTTAACGAGCGTG BRADO0463 473018 - 473821 + | hypothetical protein TERM 345 474252 - 474217 - f 100 -16.2 -4.08557 | gap 1, opp_overlap 474214 GTCTTCAAAGAAGAA GGCCCCGCCGCAGCG ATTGGGA CGCTG-GACGGGGCC AGAATTGATCAGCTT BRADO0464 474396 - 474758 + | hypothetical protein BRADO0465 474755 - 475033 + | hypothetical protein BRADO0466 475030 - 475476 + | hypothetical protein BRADO0467 475458 - 476627 + | hypothetical protein BRADO0469 476936 - 477310 + | hypothetical protein BRADO0470 477613 - 477789 + | hypothetical protein BRADO0471 478191 - 479555 + | hypothetical protein TERM 346 479672 - 479694 + G 77 -3.5 -4.77157 | gap 1 GGGTGGCTTCCGCGA CGTTGTTCGA TCGA TCGA-CAATG TTTTTGATCAGTTCG TERM 347 481453 - 481434 - g 74 -10 -3.84406 | overlap 481452 TCGCGAGTACAAGAA GCTTCGCC CTTA GACGAAGC GGCAGCCGAGCGGCT TERM 348 481489 - 481452 - g 73 -13.4 -3.25823 | gap 1, opp_overlap 481485, overlap 481434 TCGCCCTTAGACGAA GCGGCAGCCGA-GCGGC TGAGG GCCGCATCAGCGGCCAC CCGCGAACGGGCAGC TERM 349 481651 - 481684 + G 73 -13.1 -3.31248 | opp_overlap 481661 ATTTCGTGGCTGCCG TCGGCGAAGACCGGG CGAT CCCGATCATTGCCGA TTATGCCGCGTCTTC TERM 350 482168 - 482154 - g 86 -7.1 -4.91852 | TTCATCAAAAACAAA GCCGA CGTTC TCGGC AAGGTTTTCACGCCC TERM 351 482348 - 482388 + G 93 -9.6 -4.90013 | TGAGGCTGGAGCCGC CGCCGCAGGTCATGCCGT CACCA ACAGCATCAGCGGCGGCG TTTTTGGTTGGCTTG BRADO0472 479574 - 482600 + | hypothetical protein BRADO0473 483038 - 482634 - | hypothetical protein BRADO0474 483369 - 483118 - | hypothetical protein TERM 352 483559 - 483590 + r 71 -13 -3.0122 | opp_overlap 483548 AATACCCCGGTCCAC AGCGGGGTGAACCT GCGA AGTTTCACCCCGCA TCTCTCGCTTTATTT BRADO0475 483963 - 483535 - | hypothetical protein BRADO0476 484087 - 484647 + | hypothetical protein BRADO0477 484720 - 485664 + | hypothetical protein BRADO0478 485991 - 485710 - | hypothetical protein BRADO0479 486274 - 486029 - | putative transcriptional regulator TERM 353 486297 - 486316 + H 91 -9.4 -4.52857 | CGCCTTGACACTTTT TGGATCAT TGAT ATGATCCA TTTTGTATCAAGACT BRADO0480 486415 - 486696 + | hypothetical protein BRADO0481 486716 - 487117 + | hypothetical protein TERM 354 487499 - 487489 - g 76 -8.2 -4.20106 | AAAGCCGATGGAAAA CCCG ACC CGGG ACCATGTGCATCGCT BRADO0483 487379 - 487699 + | hypothetical protein TERM 355 488301 - 488281 - T 84 -11.1 -4.19953 | opp_overlap 488281 GATCTAACTGGAAAA CCCCGCC AAGTGAG GGCGGGG TTTACGCTGGCGCCG TERM 356 488281 - 488301 + T 73 -11.1 -3.59979 | opp_overlap 488281 GATCTAACTGGAAAA CCCCGCC AAGTGAG GGCGGGG TTTACGCTGGCGCCG BRADO0486 489252 - 488494 - | hypothetical protein TERM 357 489772 - 489798 + G 79 -5 -4.79752 | overlap 489773 GCCGCAAATATGCTG AGGATTATCCGC GGT GCGGGGAGTCCA TTTTATCTTGTTCGC BRADO0487 489628 - 490401 + | hypothetical protein BRADO0488 491300 - 490551 - | putative methyltransferase BRADO0489 492293 - 491334 - | putative oxidoreductase TERM 358 491512 - 491492 - G 74 -7.5 -4.2349 | GCGGGACAGCCAAAA CATAGGCCA TTG CGGCCTGTG CGGAAGACATCCCCT TERM 359 491790 - 491780 - G 82 -4.6 -4.87626 | opp_overlap 491783 GTGCAACATCAAAAA CCCC ATC GAGG TCGGCGATGTATCTC TERM 360 492260 - 492247 - G 70 -2.3 -4.57569 | CGATTCCCCCAAAAA CCGGA GCAC CCCAG CCCGATTTCTGAAAC TERM 361 492357 - 492342 - R 84 -2.5 -5.27938 | overlap 492345 492350 ATCCTGAAACAAAAA TCACG CAACCT CGCGA TCGGCAAGAGCCAAA BRADO0490 494183 - 492552 - | putative recombinase BRADO0491 494770 - 494474 - | hypothetical protein BRADO0492 494622 - 494951 + | hypothetical protein BRADO0493 495221 - 494976 - | hypothetical protein BRADO0494 495852 - 495463 - | hypothetical protein BRADO0495 499392 - 496252 - | hypothetical protein BRADO0496 500625 - 499555 - | putative branched-chain amino acid ABC transporter, permease protein BRADO0497 501605 - 500622 - | putative branched-chain amino acid ABC transporter, permease protein BRADO0498 502351 - 501629 - | putative branched-chain amino acid ABC transporter, ATP-binding protein BRADO0499 503148 - 502348 - | putative branched-chain amino acid ABC transporter, ATP-binding protein TERM 362 503054 - 503093 + g 74 -12.8 -3.56092 | gap 1, overlap 503055 CAGCTGACGCTGTTG ACCGCGACATGGCCG-CCG AAG CGGATGGTCAGGTCGCGGG TTTCGAGGGTGATGG TERM 363 503055 - 503092 + g 77 -16.3 -2.73441 | gap 1, overlap 503054 AGCTGACGCTGTTGA CCGCGACATGGCCG-CCG AAG CGGATGGTCAGGTCGCGG GTTTCGAGGGTGATG TERM 364 503153 - 503182 + r 70 -10.6 -3.56318 | opp_overlap 503151 503150, overlap 503151 503154 ATTGCTTCCAAAGTT GACGTGCCCGGC GCGAGG GCCGGGCACGGA TATTCTTGTTACCGC TERM 365 503154 - 503181 + r 72 -14.1 -2.73309 | opp_overlap 503151 503150, overlap 503153 503151 TTGCTTCCAAAGTTG ACGTGCCCGGC GCGAGG GCCGGGCACGG ATATTCTTGTTACCG BRADO0500 504399 - 503191 - | putative branched-chain amino-acid ABC transporter, periplasmic binding protein BRADO0501 506320 - 504542 - | hypothetical protein BRADO0502 507480 - 506512 - | hypothetical protein BRADO0503 507659 - 508501 + | short-chain alcohol dehydrogenase/reductase BRADO0504 510012 - 508651 - | putative cytochrome P450 family proteins TERM 366 508812 - 508763 - G 77 -10.6 -3.83205 | ACGTTGGACAGGAAA TGCCGCGCGAAGCACTTCGCCT GCATGT AGGCGAAGTGCAGGCCGAGGCA CATGTGGGCGCCGCC TERM 367 509384 - 509368 - G 74 -12.3 -3.51934 | overlap 509366 CTGCTCGGAGAAATA GGCAACG ATG CGTTGCC GGCCCTTGACGCCGC TERM 368 510460 - 510472 + r 74 -4.7 -4.57073 | overlap 510461 TTATGCCGCGATCTC CCCGG TGT CCGGC TTTTTAGCCACCGTC BRADO0506 511243 - 511085 - | hypothetical protein TERM 369 511290 - 511264 - H 88 -16.6 -3.28712 | GCCTTTCTCGCAGAA CAGCCCGCCG GGAGAGA CGGCGGGCTG GCTGACGCATCATCC BRADO0507 511736 - 512146 + | putative response regulator receiver (CheY-like protein) BRADO0508 513567 - 512329 - | putative alkanal monooxygenase (FMN-linked) (luciferase-related) TERM 370 513924 - 513941 + H 100 -6.9 -5.46706 | AATCAAATTGCTGAC GTCCGCG TTCA TGCGGGC TTTTTCTTTTGCGCT BRADO0509 514027 - 515520 + | putative polyhydroxy-alkanoate/butyrate(PHA/PHB) depolymerase BRADO0510 516347 - 515679 - | metallo-hydrolase/oxidoreductase domain-containing protein BRADO0511 516493 - 518091 + | alpha-glucosidase BRADO0512 520021 - 518312 - | maltose alpha-D-glucosyltransferase TERM 371 519123 - 519140 + g 73 -14.1 -3.16564 | opp_overlap 519112 AACAGGCCCCATTGC GCCGCGG CCGG CCGCGGC TTGGTCGCCTGCAAG TERM 372 520486 - 520462 - g 70 -13.5 -3.01791 | AGCTGTTTCCGAAGA GCACCGGCCTC ATC GTGGCCGATGC CTACGGCGCCCACCT BRADO0513 520146 - 520628 + | hypothetical protein TERM 373 520668 - 520645 - f 75 -14.6 -2.71364 | gap 1 GTAGCCCTGGAATGA CCGTCCCTGCC GAG GGCAGGG-CGG CCTCCGGGTACCGGC BRADO0514 520953 - 521282 + | hypothetical protein regR 521856 - 521302 - | two-component transcriptional regulator RegR regS 523380 - 522019 - | two component sensor histidine kinase (RegS); putative membrane protein BRADO0517 523480 - 524271 + | putative ABC transporter, ATP-binding protein BRADO0518 524268 - 525080 + | putative ABC transporter, permease protein TERM 374 525066 - 525097 + F 72 -7.3 -4.13304 | overlap 525063 GCGGGCTCGCTGCTC TCCTCGGGAGAAT AATTGC GTTTTCCCGTGGA TTTTCGGGCTCATTT BRADO0519 525205 - 526533 + | putative intracellular PHB depolymerase TERM 375 526544 - 526581 + F 81 -14.1 -3.54459 | overlap 526513 526534 526551 AATAGCGTCGAGGGC GAGGTTTCGCGCAGTCG AATC CGACTGCGCGTTAACTC TTTGAAGAGGCTTCG TERM 376 526551 - 526574 + F 91 -18.2 -3.24021 | overlap 526544 TCGAGGGCGAGGTTT CGCGCAGTCG AATC CGACTGCGCG TTAACTCTTTGAAGA TERM 377 526635 - 526655 + F 76 -13.3 -3.39803 | opp_overlap 526631 CAAGCAGTGAATGTG GCGTCGCTT CTT GAGCGACGC TTCTGAATCTGAATC TERM 378 526739 - 526749 + F 72 -4 -4.56597 | CCCCTGTATGTTGGG CAAA TGA TTTG TTTTTGCGCCGAGCG TERM 379 526816 - 526792 - f 76 -8.6 -4.16943 | gap 1 GCGGATATGGCAAAA TCCGGGCGAGT TCTT ACCC-CCCGGA CTGACAGAAATGGCC BRADO0520 526985 - 527581 + | putative metal-dependent hydrolase TERM 380 527657 - 527619 - f 84 -16.1 -3.05816 | gap 1, opp_overlap 527620 527621, overlap 527623 CGATCGGCGATTGAA CTGACGATGGCCTGCACC ACCC GGTGCAGGCCATTGCC-G TTTCACGGTTCCATG TERM 381 527620 - 527657 + F 100 -18.5 -3.61268 | opp_overlap 527619 527623, overlap 527621 GATCGGCGATTGAAC TGACGATGGCCTGCACC ACCC GGTGCAGGCCATTGCCG TTTCACGGTTCCATG TERM 382 527621 - 527656 + F 90 -19.8 -2.7644 | opp_overlap 527619 527623, overlap 527620 ATCGGCGATTGAACT GACGATGGCCTGCACC ACCC GGTGCAGGCCATTGCC GTTTCACGGTTCCAT TERM 383 527654 - 527623 - f 87 -18.8 -2.54896 | opp_overlap 527621 527620, overlap 527619 CGGCGATTGAACTGA CGATGGCCTGCACC ACCC GGTGCAGGCCATTG CCGTTTCACGGTTCC BRADO0521 527889 - 530573 + | diguanylate cyclase/phosphodiesterase BRADO0522 532914 - 530680 - | putative penicillin-binding protein pbpC/mrcB-like TERM 384 530946 - 530962 + g 75 -11.5 -3.71848 | ACACCTCGACCGGCA GGCCGCC GCC GGTGGCC TTCTTGGTCGGCGAA BRADO0523 533057 - 533482 + | hypothetical protein TERM 385 533607 - 533581 - f 93 -18 -3.28712 | overlap 533564 533557 533583 533595 TGTCGTCCCGGACAA GACCGCTGACGC AAC GCGTCAGCGGGC GCCGATCCGGACCCA TERM 386 533605 - 533583 - f 93 -19.2 -3.21276 | overlap 533564 533557 533581 533595 TCGTCCCGGACAAGA CCGCTGACGC AAC GCGTCAGCGG GCGCCGATCCGGACC BRADO0524 533814 - 534146 + | ArsR family transcriptional regulator BRADO0525 534143 - 534502 + | hypothetical protein clpP 534544 - 535161 + | ATP-dependent Clp protease proteolytic subunit BRADO0527 536577 - 535327 - | putative branched-chain amino acid ABC transporter, periplasmic binding protein TERM 387 536744 - 536723 - R 100 -17.3 -4.27316 | TGCCGCAATGCAAAA GGGCTGCGC GATC GCGCAGCCC CGTACCAGTAGACAG BRADO0528 538129 - 536945 - | putative branched-chain amino acid ABC transporter, periplasmic binding protein TERM 388 538515 - 538542 + r 100 -22.8 -3.28712 | GGGTCCCGGATCGGC GCCGTGACGCGC TGAT GCGCGTCACGGC TTGTCCGGGACGACA TERM 389 539177 - 539204 + r 100 -22.8 -3.28712 | GGGTCCCGGATCGGC GCCGTGACGCGC TGAT GCGCGTCACGGC TTGTCCGGGACGACA BRADO0529 539603 - 539244 - | hypothetical protein glnD 542523 - 539728 - | PII uridylyl-transferase BRADO0531 542718 - 543692 + | putative sulfonate ABC transporter, periplasmic binding protein (ssuA/ycbO-like) TERM 390 543826 - 543802 - f 88 -6.3 -5.24129 | overlap 543821 TGGCGCGACAAAAAA CCGGTTTCGTC CCG GACAAGCCCGG CAACGCGACAGCGTT TERM 391 543848 - 543821 - f 91 -17 -3.28712 | overlap 543802 TTTCGTCCCGGACAA GCCCGGCAACGC GACA GCGTTGGCGGGC GCCGATCCGGGACCC BRADO0532 544045 - 544893 + | putative sulfonate ABC transporter, permease protein (ssuC/ycbM-like) BRADO0533 544893 - 545678 + | putative sulfonate ABC transporter, ATP binding protein (ssuB/tauB/ycbE-like) BRADO0534 545735 - 546250 + | hypothetical protein BRADO0535 546440 - 547231 + | hypothetical protein BRADO0536 547345 - 547854 + | hypothetical protein TERM 392 547924 - 547936 + T 70 -10.5 -3.53811 | opp_overlap 547878 TGCAGATGGTGGCAC GGCGC TGC GCGCC TTTGCCCACCCTACG mutS 550806 - 548056 - | DNA mismatch repair protein TERM 393 550573 - 550599 + g 70 -6.6 -4.2558 | gap 1 GCCCTGATGCTTGCC GCGCTTGGTCA AGACGA TG-CCGAGCGC TTTTGATGCGACCTC TERM 394 550973 - 550927 - H 80 -14.4 -3.21099 | opp_overlap 550938, overlap 550892 CGTGCGCAGCACGAA CCCGGAATCCATCGTGCGGC AGGTTAA GCGGCCCGATGAGTTCCGGG TTCGCCGTGATGCGC BRADO0538 551340 - 552548 + | beta-ketoadipyl CoA thiolase TERM 395 552568 - 552619 + F 84 -16.1 -3.09635 | gap 2, opp_overlap 552551 552573 552578 552582, overlap 552574 552578 552582 CCGGCGTCATTGCGA GCGAAGCGAAGCAATCCAGGGTCGC GCGC GCAGCTCTGGATTGCTTCG-T-CGC TTCGCTCCTCGCAAT TERM 396 552616 - 552573 - f 78 -14.6 -3.06183 | opp_overlap 552568 552574 552578 552582, overlap 552578 552582 GTCATTGCGAGCGAA GCGAAGCAATCCAGGGTCGC GCGC GCAGCTCTGGATTGCTTCGT CGCTTCGCTCCTCGC TERM 397 552574 - 552615 + F 90 -20.3 -2.55544 | opp_overlap 552573 552578 552582, overlap 552568 552578 552582 TCATTGCGAGCGAAG CGAAGCAATCCAGGGTCGC GCGC GCAGCTCTGGATTGCTTCG TCGCTTCGCTCCTCG TERM 398 552611 - 552578 - f 70 -11.7 -3.19192 | opp_overlap 552578 552574 552568 552582, overlap 552573 552582 TGCGAGCGAAGCGAA GCAATCCAGGGTCGC GCGC GCAGCTCTGGATTGC TTCGTCGCTTCGCTC TERM 399 552578 - 552611 + F 76 -13.9 -3.22388 | opp_overlap 552573 552578 552582, overlap 552574 552568 552582 TGCGAGCGAAGCGAA GCAATCCAGGGTCGC GCGC GCAGCTCTGGATTGC TTCGTCGCTTCGCTC TERM 400 553097 - 553081 - g 71 -15.1 -2.53876 | GTCGATCCGAACGGA GCGCCGG TGG CCGGCGC CGAGGTCGACGTCTG BRADO0539 552643 - 553554 + | catechol 1,2-dioxygenase TERM 401 553838 - 553865 + T 91 -17 -3.28712 | GGGTCCCGGATCTGC GCCCGCCAACGC TATC GCGTTGCCGGGC TTGTCCGGGAAGACG BRADO0541 555859 - 554354 - | EmrB/QacA family drug resistance transporter BRADO0542 557072 - 555915 - | efflux pump protein BRADO0543 557544 - 557065 - | MarR family transcriptional regulator TERM 402 557209 - 557250 + g 91 -11.6 -4.1822 | gap 3, overlap 557203 GGTGTCGGTCAGCTC GCCGCGCAGCACCGCCAGCTT GGC GAGCAG-CGG-GC-GCGCGGC TTTCTTCAGATAGAG TERM 403 557843 - 557865 + G 71 -14.8 -2.62184 | opp_overlap 557831 557832 GAAGTTCACGCCGCA GCGCCGCCAG GTG CTGGAGGCGC TGCTGTCGAGCCACA BRADO0544 557724 - 558251 + | zinc uptake regulator ZUR TERM 404 558458 - 558435 - f 91 -18.2 -3.19192 | opp_overlap 558455 TTCGATGCAATTTAA CCTCTCCCCG CGCG CGGGGAGAGG CGGGGACCGCCGCTG BRADO0545 558568 - 559521 + | DMT family permease ispG 559535 - 560836 + | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase BRADO0547 563564 - 560961 - | hypothetical protein TERM 405 561385 - 561401 + g 70 -2.1 -4.59773 | overlap 561387 CGGCGAAGATAGTTT GCAGTCG CCT CGACACC TTTTTCGCCCTCAGA BRADO0548 563921 - 564433 + | hypothetical protein BRADO0549 564755 - 564468 - | putative plasmid stabilization system protein protein TERM 406 565170 - 565180 + r 74 -4.6 -4.59342 | TTAGTTATCAGGCAG GCTG GAG CGGC TTTCTTTGTCATCAC BRADO0551 567518 - 565911 - | putative sodium/hydrogen antiporter (exchanger); putative membrane protein BRADO0552 567923 - 567549 - | hypothetical protein BRADO0553 568145 - 570061 + | putative caspase (peptidase) BRADO0554 570754 - 570062 - | hypothetical protein TERM 407 570810 - 570795 - R 74 -10.4 -3.72576 | CGCTCGGCGACGAAA TGCGCG GCGG CGCGCA GCACGTCGCCCTTGG BRADO0555 571690 - 570770 - | putative geranyltranstransferase (farnesyl-diphosphate synthase) (FPP synthase) TERM 408 572439 - 572478 + G 80 -15.7 -3.29263 | gap 1 CCTGCCGAATCCGGT CCGGCGCAGCGCCCGGAC GCCGG GTCCCGGCG-TGCGGCGG TTGTCGGCGACCTAT mtgA 571876 - 572547 + | monofunctional biosynthetic peptidoglycan transglycosylase TERM 409 572778 - 572740 - g 83 -3 -5.18726 | overlap 572742 TCCCCAGAAGAAAAA CTTC-GCCGTCGCGCCGC GGCAT GCGCCGCT-CGGCCGATG CGATCAAGAAGCCGA rpmF 572718 - 572900 + | 50S ribosomal protein L32 TERM 410 572988 - 572957 - f 91 -16.7 -3.58343 | gap 1, opp_overlap 572952 TCGATGAGGTTGAAA TCGGTCCCGCGCGA TTGAT TCGC-CGGGACCGA TGCGCATGTGTCATG BRADO0558 573083 - 573835 + | hypothetical protein BRADO0559 574145 - 573870 - | hypothetical protein BRADO0560 574405 - 576120 + | putative diguanylate cyclase (GGDEF)/phosphodiesterase (EAL) BRADO0561 576751 - 576155 - | putative polyhydroxyalkanoate synthesis repressor PhaR-like TERM 411 576260 - 576278 + g 82 -16 -3.4252 | GTCGTCGGAAGCGGC GGCGGCAG GCT CTGCCGCC TTCTCCTCCGTCCGC TERM 412 576803 - 576785 - H 86 -16 -3.17797 | overlap 576778 CCGAGATACAGGGAA CCCTGCGG GTG CCGCAGGG CAAACGAGCTACGCA TERM 413 576913 - 576893 - H 74 -6.1 -4.50976 | TCCGACAGCAGAAAA CTTGCCCAT CAA ACGGCCAAG CGCACCAATTTGAGT phbA 577130 - 578314 + | acetyl-CoA acetyltransferase TERM 414 578408 - 578373 - f 76 -10.5 -3.90112 | gap 2, opp_overlap 578379, overlap 578375 578379 TCCCGCTCAACTAAA GATCAA--CGCCCGGCG ATCT CGCCGGGCGTTTTGTTC TTGATGTCCGTCAAA TERM 415 578404 - 578375 - f 81 -13.5 -3.54146 | opp_overlap 578379, overlap 578373 578379 CCGCTCAACTAAAGA TCAACGCCCGGCG ATCT CGCCGGGCGTTTT GTTCTTGATGTCCGT TERM 416 578379 - 578400 + F 100 -18.7 -4.93661 | opp_overlap 578375 578373 578379 TCAACTAAAGATCAA CGCCCGGCG ATCT CGCCGGGCG TTTTGTTCTTGATGT TERM 417 578400 - 578379 - f 95 -18.7 -3.50456 | opp_overlap 578379, overlap 578375 578373 TCAACTAAAGATCAA CGCCCGGCG ATCT CGCCGGGCG TTTTGTTCTTGATGT phbB 578585 - 579310 + | acetoacetyl-CoA reductase TERM 418 579363 - 579400 + F 70 -10.6 -3.66178 | gap 1, opp_overlap 579365 579368 579372, overlap 579366 GCGATCTGCGGTTAA GACCACGAATGCCCGCG CCTGC CGCGGGCATTCACG-TC TTTGGCGTTGCCCGG TERM 419 579399 - 579365 - f 78 -14.3 -3.01924 | opp_overlap 579363 579366, overlap 579368 579372 GATCTGCGGTTAAGA CCACGAATGCCCGCG CCTGC CGCGGGCATTCACGT CTTTGGCGTTGCCCG TERM 420 579366 - 579398 + F 79 -13.4 -3.41222 | opp_overlap 579365 579368 579372, overlap 579363 ATCTGCGGTTAAGAC CACGAATGCCCGCG CCTGC CGCGGGCATTCACG TCTTTGGCGTTGCCC TERM 421 579396 - 579368 - f 81 -16.8 -2.73875 | opp_overlap 579366 579363, overlap 579365 579372 CTGCGGTTAAGACCA CGAATGCCCGCG CCTGC CGCGGGCATTCA CGTCTTTGGCGTTGC TERM 422 579392 - 579372 - f 77 -14 -3.27923 | opp_overlap 579366 579363, overlap 579368 579365 GGTTAAGACCACGAA TGCCCGCG CCTGC CGCGGGCA TTCACGTCTTTGGCG BRADO0564 579473 - 580345 + | putative transmembrane protein TERM 423 580406 - 580423 + F 73 -11.3 -3.54029 | GCGGCCGCATCATGC TCGGCAG GAAT CTGCCGA TTATCCTTGATGCGC BRADO0565 580554 - 582590 + | hypothetical protein BRADO0566 582927 - 582592 - | hypothetical protein BRADO0567 583808 - 583041 - | putative hydroxyacylglutathione hydrolase (glyoxalase II) BRADO0568 583998 - 584804 + | putative SAM-dependent methyltransferase TERM 424 584874 - 584849 - T 100 -21.9 -5.41143 | GAGCTCGCAAAAAAA GCGGGCAGGCC GTGG GGCCTGCCCGC TCGATCATCATGGAT BRADO0569 585737 - 584898 - | hypothetical protein TERM 425 585942 - 585928 - R 85 -10 -4.37092 | opp_overlap 585916 ATTCGCTCGACAAAA GCGTGT TCA ACACGC GTTCCCCACCCACCG BRADO0571 587159 - 586272 - | putative methyltransferase hemK modifies release factors RF-1 and RF-2 prfA 588438 - 587353 - | peptide chain release factor 1 ptsP 590768 - 588501 - | phosphoenolpyruvate-protein phosphotransferase TERM 426 590989 - 590972 - R 91 -9.1 -4.4078 | gap 1 TTTTGCCAAGCAAAA CGCCTGCC AGC GGC-GGCG ACGTCAACGGCTTTC lysC 592326 - 591070 - | aspartate kinase BRADO0575 592473 - 592940 + | hypothetical protein ubiG 592981 - 593742 + | 3-demethylubiquinone-9 3-methyltransferase BRADO0577 594116 - 593835 - | excinuclease ABC subunit C BRADO0578 594351 - 595250 + | hypothetical protein BRADO0579 595688 - 595251 - | hypothetical protein TERM 427 595636 - 595619 - G 72 -8.4 -4.08216 | CGACCTTGGCGAAAA TCGCGG TGAGCG CCGCGA ACAACGCGGAGAGCA BRADO0580 596357 - 595875 - | hypothetical protein TERM 428 596027 - 596043 + g 80 -13.7 -3.64487 | overlap 596035 CGGTCGGGAAGCGCT CGCCGAC ATC GTCGGCG TTCTTGACGATATGG BRADO0581 597232 - 596354 - | putative nitrilase grxC 597504 - 597229 - | glutaredoxin 3 BRADO0583 598338 - 597535 - | putative competence protein F (COMF) TERM 429 597900 - 597874 - G 78 -10 -4.08216 | overlap 597875 GTAGCGGCGGGAAAA GCCGCGCCGCCA ATG CAGCGGCACGGG GACCAGGAGATCGGC TERM 430 597899 - 597875 - G 70 -13.5 -3.04715 | overlap 597874 TAGCGGCGGGAAAAG CCGCGCCGCCA ATG CAGCGGCACGG GGACCAGGAGATCGG BRADO0584 598417 - 599274 + | putative SAM-dependent methyltransferase BRADO0585 599832 - 599422 - | putative mutator protein mutT BRADO0586 599996 - 601252 + | hypothetical protein BRADO0587 601425 - 602753 + | hypothetical protein argJ 604055 - 602814 - | bifunctional ornithine acetyltransferase/N-acetylglutamate synthase protein TERM 431 604229 - 604262 + r 79 -8.1 -4.36914 | gap 1, overlap 604233 TTTCCAACATCACGC GGTATGGGTCCCGGCT CAA GGCCGGGACG-ACACC TTTTGTGACGCGGCG TERM 432 604349 - 604390 + r 72 -11.6 -3.29144 | gap 3, overlap 604379 TTCTTCGCCGGCTCG GCCGGCT-TCG-CGTCCGCCG GCT TGGCGG-CGTCGGCGGCCGGC TTGTCCAGGCGCTCG BRADO0589 605154 - 604330 - | putative peptidylprolyl isomerase TERM 433 605051 - 605078 + g 77 -13.4 -3.54459 | GGACCAAGCTCCTCC TCCGCGAGCGCG ACGT CGCTCTTGCGGA TTTCGGCACCGTTCA TERM 434 605413 - 605438 + H 76 -7.5 -4.2693 | CCCAGCCATATCTCT GCCCTGTCGCT CCAA GGCGATAGCGC TTATTTTGCTGCGTT secA 605621 - 608473 + | preprotein translocase subunit SecA BRADO0591 609942 - 608833 - | glycoside hydrolase family protein BRADO0592 611431 - 610064 - | hypothetical protein TERM 435 610909 - 610952 + g 71 -9.5 -3.84406 | gap 1, opp_overlap 610864, overlap 610864 610910 GCTGCTCGGAGCGCG AGCCGTCGGCATGTTCGACG CGCGC CGTC-ACCGTGCCGTCGGCG TTCTTCTCATAGCCC BRADO0596 614658 - 612739 - | acyl-CoA synthetase TERM 436 613891 - 613861 - G 74 -12.5 -3.59979 | overlap 613881 GCCGCCGACGTGAAA CAGCGGCATGCCG AACAG CAGCGTGCCGCCG GGCTTCGCCTTCAAC TERM 437 614517 - 614473 - G 71 -9.3 -3.86897 | gap 1, opp_overlap 614479 GGCATTCGGCAGAAA CTGGATTGCCGGCGCATCGG GATTGG CCGATGCCCCG-CATTTCAG CGCCTCGTAGGTGCT TERM 438 615857 - 615813 - g 79 -4.8 -4.73388 | overlap 615831 AAGCTCGAGGAAAAA GGCGGTAACGGCAAGAAGCC GAAGG AGCCTCGGGCCTCCACCACC GATCCGCAGGCGCGG BRADO0597 615048 - 616406 + | putative transposase TERM 439 616575 - 616608 + T 71 -12.6 -3.06796 | opp_overlap 616575 616579, overlap 616579 TGCGAGCGCAGCGAA GCAATCCAGGGT GGTGGGCGGG ACCCTGGATTGC TTCGCTGCGCTCGCA TERM 440 616608 - 616575 - T 71 -12.6 -3.06796 | opp_overlap 616575 616579, overlap 616579 TGCGAGCGCAGCGAA GCAATCCAGGGT GGTGGGCGGG ACCCTGGATTGC TTCGCTGCGCTCGCA BRADO0598 617116 - 616673 - | MarR family transcriptional regulator TERM 441 617612 - 617636 + G 70 -11.3 -3.53811 | overlap 617633 CGGTGGATGACGTGG TCGCGCGCGCC CGC GACGCGCTCGA TTTCGACGACATCGA BRADO0599 617299 - 618480 + | ABC transporter substrate-binding protein BRADO0600 620754 - 618682 - | GGDEF domain-containing protein TERM 442 620253 - 620236 - G 71 -12.7 -3.32343 | GCCATATTTGCAGAA GCGCGTC ACCG GACGCGC GATGCGGTTCGCGGC TERM 443 620765 - 620796 + r 73 -8.1 -4.07568 | gap 3, opp_overlap 620760 620759 620782 GGCAATGAACCCCTA CGCAGGC-CAGCTACG AAC CG-AGCTGCGCC-GCG TTTTGGCGCGCCGGG gcd 623392 - 620993 - | quinoprotein glucose dehydrogenase TERM 444 623438 - 623422 - H 82 -11.5 -4.02108 | overlap 623423 CTGATGAGAACGAAA CGCGGCG CGA CGCCGCA GTCGCGTCATGAACG TERM 445 623437 - 623423 - H 71 -12.8 -3.00783 | overlap 623422 TGATGAGAACGAAAC GCGGCG CGA CGCCGC AGTCGCGTCATGAAC BRADO0602 623712 - 624605 + | hypothetical protein TERM 446 624631 - 624666 + T 100 -16.2 -4.08767 | opp_overlap 624635, overlap 624635 624638 ACATCGAGGAGACGA AAAAGAACCCGCGGTG CGCG CACCGCGGGTTCTTCC TTTTCCAAGCCTCAG TERM 447 624662 - 624635 - T 100 -21.4 -4.82667 | opp_overlap 624631 624635 624638 CGAGGAGACGAAAAA GAACCCGCGGTG CGCG CACCGCGGGTTC TTCCTTTTCCAAGCC TERM 448 624635 - 624662 + T 100 -21.4 -3.66908 | opp_overlap 624635, overlap 624631 624638 CGAGGAGACGAAAAA GAACCCGCGGTG CGCG CACCGCGGGTTC TTCCTTTTCCAAGCC TERM 449 624638 - 624659 + T 100 -17.3 -3.965 | opp_overlap 624635, overlap 624635 624631 GGAGACGAAAAAGAA CCCGCGGTG CGCG CACCGCGGG TTCTTCCTTTTCCAA BRADO0603 626126 - 624678 - | putative PE-PGRS family protein TERM 450 626263 - 626235 - R 93 -18.2 -3.27022 | opp_overlap 626230 626228 CGGACTCGACACGAA TACCCCGCCGCG CGGTC CGCGGCAGGGTA TCGCTGCTGTCGTCG BRADO0604 627622 - 626294 - | hypothetical protein TERM 451 626530 - 626540 + g 72 -8.2 -4.08216 | opp_overlap 626520, overlap 626522 ATCCAGCGCCTTGGA CGCC CTG GGCG TTTTCGCCGGCATGG TERM 452 628598 - 628572 - R 93 -19.4 -3.28712 | CGTCGTCCCGGACAA GCCGTGACGCGC AAG GCGCGTCGCGGC GCTGATCCGGGACCC BRADO0605 630337 - 628832 - | putative exported protein; putative transcriptiona regulatory protein at C-terminal TERM 453 630621 - 630566 - R 73 -8.9 -3.99957 | overlap 630558 630567 GGAAAGACTCACAAA TCCGCGAG-TGACCAGAGCCGGCCGGG AGAT CTCGG-CGGCTCAGCTCAGCTTGCGGC CGATCTCGATGAACT accA 631567 - 630605 - | acetyl-CoA carboxylase carboxyltransferase subunit alpha TERM 454 630710 - 630761 + g 87 -18.7 -2.72661 | gap 1, opp_overlap 630693 CTGGGCGATGGCGTC GCCGGTC-GCCGCGATCATCGCGG CGGGA TCGCGGTGGGCGCCGCCGACCGGC TCCTTGAGGATGGTG TERM 455 631411 - 631433 + g 87 -17 -3.4252 | TCAGATTGGCGTAGA GGTCGGCCAG CGC CTGGCCGGCC TTCTCCTCGATCCGG xerD 632713 - 631787 - | site-specific tyrosine recombinase BRADO0608 633061 - 632915 - | hypothetical protein TERM 456 633139 - 633106 - H 71 -13.1 -3.08679 | GGGTTTCATCCAACA TGTTCGCACCCGGCT GGCA AGCCCGGCGCGACCA GCCCGTTGCCCTATG TERM 457 634613 - 634660 + G 70 -10.3 -3.65522 | opp_overlap 634639 CCGCGCCAGTTCCGC GCCGGCTATGCCGAGGTCGCC AAATAC GGCCTGCTCGGCGACGCCGGC TTCTTCGCCTGGCTC BRADO0609 633392 - 635194 + | bifunctional: shikimate kinase (N-terminal); dehydroquinate synthase (C-terminal) BRADO0610 635269 - 636573 + | CBS domain-containing protein BRADO0611 636795 - 636622 - | hypothetical protein BRADO0612 637074 - 637643 + | hypothetical protein TERM 458 637638 - 637673 + T 85 -15.4 -3.452 | gap 1, overlap 637639 AAGACGGTGGTGAAG GGCTGACACGCGGCAGC GAG GCTGCCGCGCGTC-GCA TTCTGGGTGTTTAGG TERM 459 637639 - 637672 + T 87 -18.9 -2.66638 | gap 1, overlap 637638 AGACGGTGGTGAAGG GCTGACACGCGGCAGC GAG GCTGCCGCGCGTC-GC ATTCTGGGTGTTTAG BRADO0613 638799 - 637684 - | citrate synthase 2 BRADO0614 638837 - 640078 + | putative citrate synthase BRADO0615 640749 - 640093 - | putative DedA family protein cobS 641090 - 642046 + | aerobic cobaltochelatase subunit CobS TERM 460 643805 - 643778 - g 73 -13.5 -3.29144 | gap 1 GGACTGGGCGCACAA GCGCCTGCTCGG CCGGC CCGAGCAG-CGC AAGATCCTGATGATG cobT 642207 - 644111 + | aerobic cobaltochelatase subunit CobT TERM 461 644196 - 644210 + G 73 -4.2 -4.65916 | overlap 644169 644187 GACGCTGCAGGCGAT CGCC GACCGCA GGCG TTTTCTTGCGCTGAC BRADO0619 644179 - 645255 + | hypothetical protein namA 645354 - 646466 + | NADPH dehydrogenase BRADO0622 646685 - 647785 + | putative luciferase-like monooxygenase TERM 462 647786 - 647831 + F 84 -17.5 -2.73364 | opp_overlap 647788 ACCAGGGCGGCGTAA TATCAGCGATCGGGCCGGCGC AGGT GCGCCGGTCCGATCGACGAGG TCATTGCCATGCGCA TERM 463 647829 - 647788 - f 100 -22.3 -3.01924 | opp_overlap 647786 CAGGGCGGCGTAATA TCAGCGATCGGGCCGGCGC AGGT GCGCCGGTCCGATCGACGA GGTCATTGCCATGCG BRADO0623 647840 - 648265 + | hypothetical protein TERM 464 649741 - 649688 - g 86 -16.2 -3.50853 | gap 3, overlap 649720 GGCCGTGAAGCAGAA CCTCCAGG-ACGTCGGCATGACGATCG AGA CGATCGCCA--CCGACGTGCCCGGCGG CAATCAGAAGATCAT BRADO0624 648693 - 650111 + | ABC transporter, substrate binding protein; putative dipeptide transporter TERM 465 650363 - 650322 - f 86 -12.2 -4.11183 | gap 1, overlap 650324 650325 TCCGATGACAAACAA TAG-TCCTGGGGCGCTGCG GTGTG CGCTGCGCCCCAGGTGCTC CACCTGCATCTCGAG TERM 466 650360 - 650324 - f 85 -15 -3.64882 | overlap 650322 650325 CGATGACAAACAATA GTCCTGGGGCGCTGCG GTGTG CGCTGCGCCCCAGGTG CTCCACCTGCATCTC TERM 467 650359 - 650325 - f 86 -18.5 -2.78206 | overlap 650324 650322 GATGACAAACAATAG TCCTGGGGCGCTGCG GTGTG CGCTGCGCCCCAGGT GCTCCACCTGCATCT BRADO0626 650399 - 651370 + | putative dipeptide transport system permease protein TERM 468 652071 - 652104 + G 81 -14.7 -3.54424 | GGTCGGCGCCGGCCG TACCGTCATCCGCCA GGCC TGGTGGATCACGGTA TTTCCGGGCGTGGCG BRADO0627 651367 - 652206 + | putative dipeptide transport system permease protein TERM 469 652334 - 652318 - f 74 -5.7 -4.49958 | opp_overlap 652318, overlap 652322 AGCGCAGCAAACAAA GCACGGC ATC GGCGCGC CTTTGCCCACCCTAC BRADO0628 652370 - 653992 + | ABC transporter, ATP-binding protein; putative dipeptide/oligopeptide/nickel transporter BRADO0629 654197 - 654394 + | hypothetical protein TERM 470 654402 - 654385 - T 100 -9.8 -4.88918 | opp_overlap 654385 654387, overlap 654370 CGATCGCAAACAAAA GCCGGC TTGAGC GCCGGC TTCGTTCACGTCGTT rpsU 654767 - 654444 - | 30S ribosomal protein S21 TERM 471 655048 - 655038 - H 73 -8.2 -4.07568 | CGCGCCGGTCTAAAA GCCG TAT CGGC CGAAAACTATATTTG cspA 655224 - 655430 + | cold shock protein, DNA binding TERM 472 655485 - 655516 + F 89 -14.4 -3.84451 | overlap 655487 ACTGAAATGGCTGGA CTGCCCGCTCGGTC TCAT GATTGAGCGGGCTG TTTGCGTTTCCACGA TERM 473 655487 - 655514 + F 85 -15.6 -3.50832 | overlap 655485 TGAAATGGCTGGACT GCCCGCTCGGTC TCAT GATTGAGCGGGC TGTTTGCGTTTCCAC BRADO0632 655562 - 655804 + | hypothetical protein TERM 474 656075 - 656088 + G 70 -3.7 -4.56597 | CACCGCGTTCGAGCA GCGCG CCCG CGAGC TTTTTGCGCGCGGCG BRADO0633 655956 - 656141 + | hypothetical protein BRADO0634 657482 - 656220 - | hypothetical protein TERM 475 657747 - 657712 - R 83 -14.8 -3.53224 | opp_overlap 657718, overlap 657713 657718 GATCGTTTCCGCAAA TGAAAACGGCCGGATC CTGC GATCCGACCGTTCTCT CAACTCACCTTGCGC TERM 476 657746 - 657713 - R 86 -18.3 -2.71791 | opp_overlap 657718, overlap 657712 657718 ATCGTTTCCGCAAAT GAAAACGGCCGGATC CTGC GATCCGACCGTTCTC TCAACTCACCTTGCG TERM 477 657741 - 657718 - R 100 -14.6 -4.54727 | opp_overlap 657718, overlap 657713 657712 TTCCGCAAATGAAAA CGGCCGGATC CTGC GATCCGACCG TTCTCTCAACTCACC TERM 478 657718 - 657741 + r 74 -12.4 -3.50393 | opp_overlap 657713 657712 657718 TTCCGCAAATGAAAA CGGCCGGATC CTGC GATCCGACCG TTCTCTCAACTCACC rpmB 658101 - 657793 - | 50S ribosomal protein L28 BRADO0637 658719 - 659495 + | hypothetical protein TERM 479 660678 - 660723 + G 72 -6.9 -4.1899 | gap 1, opp_overlap 660653, overlap 660679 ATTATCTCGTCGCGA CCGACGCGATCGGCAT-GGG CCTCAAC CTCGATGTCGATCACGTCGC TTTTGCCTCGGATCG TERM 480 662456 - 662440 - g 70 -6.5 -4.1899 | overlap 662441 CTACCGCATGGAAAA GCGGC CGCCCTT GCCGC CGAAGCCGGTTGAAA TERM 481 662540 - 662514 - g 77 -13.6 -3.53091 | overlap 662515 662531 AGGCGCCGGCCGAAA CGGCAGCGGCGG AGA CAGCCGCTGCCC AGCCGGACGCGCAGG TERM 482 662539 - 662515 - g 80 -17.1 -2.71712 | overlap 662514 662531 GGCGCCGGCCGAAAC GGCAGCGGCGG AGA CAGCCGCTGCC CAGCCGGACGCGCAG BRADO0639 659957 - 663469 + | putative ATP-dependent RNA and DNA helicase/translation initiation factor 2 BRADO0640 663544 - 663774 + | putative ribosomal protein S4 BRADO0641 664020 - 664226 + | ferredoxin II (fragment) TERM 483 664624 - 664614 - f 100 -8.2 -5.70829 | opp_overlap 664616, overlap 664615 664616 AAGAGTACAAAAAAA GCCG CCG CGGC CAGCCGCAGCGTTTC TERM 484 664636 - 664615 - f 76 -9.3 -4.00057 | opp_overlap 664616, overlap 664614 664616 AGAGTACAAAAAAAG CCGCCGCGG CCAG CCGCAGCGT TTCCAAGGGCCGTGC TERM 485 664635 - 664616 - f 71 -12.8 -2.98407 | opp_overlap 664616, overlap 664614 664615 GAGTACAAAAAAAGC CGCCGCGG CCAG CCGCAGCG TTTCCAAGGGCCGTG BRADO0642 664947 - 665561 + | CarD family transcriptional regulator TERM 486 665620 - 665601 - T 74 -10.6 -3.72893 | opp_overlap 665601 TAGTTGCTTACGAAA GCCCGGCC GCGA GGTCGGGC TTTTTGTTTGGTGCC TERM 487 665601 - 665620 + T 100 -12.8 -5.33405 | opp_overlap 665601 TAGTTGCTTACGAAA GCCCGGCC GCGA GGTCGGGC TTTTTGTTTGGTGCC BRADO0643 667429 - 665963 - | putative Zn-dependent protease BRADO0644 668204 - 667479 - | hypothetical protein BRADO0645 668491 - 669675 + | putative ABC transporter (substrate binding protein) TERM 488 669686 - 669710 + F 76 -13.6 -3.13164 | gap 1 AATGACCTTTGGACG GCCGTGGAGCG GGTC CGC-CCACGGC TTCCGTCGTTCCGGG BRADO0646 669848 - 670639 + | enoyl-CoA hydratase TERM 489 670973 - 671024 + G 72 -5.2 -4.36914 | opp_overlap 671001 671002, overlap 670976 TGCTGCCGGTCGGGC CGATCCTGCTCG-AG-GTCGTCGCGC CAAA GCGCGAAGGCACGGCG-GCAGGA-CG TTTTCTCGACAAGAC BRADO0647 670819 - 671604 + | hypothetical protein BRADO0648 672112 - 671699 - | hypothetical protein BRADO0649 672237 - 672782 + | hypothetical protein BRADO0650 672779 - 675508 + | hypothetical protein BRADO0651 676402 - 675596 - | putative enoyl-CoA hydratase TERM 490 675879 - 675908 + g 73 -9.3 -3.9461 | gap 1, overlap 675861 TCCTCGCCGGTGACG CGGCG-GCTGGTGT AGA ACATCAGCTCGGCG TTGTTCTTGCCGACC BRADO0652 677705 - 676548 - | putative acyl-CoA dehydrogenase TERM 491 676953 - 676935 - G 78 -16 -3.14564 | GTAGGTTTCCAGGAA GCGCTCCG GCC CGGAGCGC TCATAGGCGAGCTCG TERM 492 677438 - 677424 - G 77 -12.8 -3.71848 | opp_overlap 677410 GTCGGCGACGAAGAA GCGCCG CAC CGGCGC ATTGGCGACGCGCAT BRADO0653 678791 - 677727 - | putative acyl-CoA dehydrogenase TERM 493 678044 - 678066 + g 75 -13.4 -3.40403 | CGCTTGCCGCCGCGC TCTCGCCAGC GAG GCGGGCGAGA TTGTGCTGCACCGCC TERM 494 678816 - 678846 + H 81 -14.1 -3.5393 | gap 2 CGTGCTGATTGTTCT GCATCGCGCCGGCGC TCG GCG-CGG-GCGATGC TTTGGCGCGCATGAT TERM 495 678933 - 678883 - H 78 -14.8 -3.02043 | gap 2, opp_overlap 678882 678883 678886 678925, overlap 678886 AAGCGCTCCGCAAGA CAAGCGCTGCCCATCGCAGGGCGC CGTCC GCGCCCCGC-ATGGACCG-GCTCG ATTTCCGCAGCGCGG TERM 496 678930 - 678886 - H 77 -12.9 -3.65812 | gap 2, opp_overlap 678883 678882 678886 678925, overlap 678883 CGCTCCGCAAGACAA GCGCTGCCCATCGCAGGGCGC CGTCC GCGCCCCGC-ATGGACCG-GC TCGATTTCCGCAGCG BRADO0654 679036 - 679818 + | putative short-chain dehydrogenase/reductase (SDR) family protein; putative 3-oxoacyl-[acyl-carrier-protein] reductase TERM 497 680065 - 680036 - T 73 -11.5 -3.65902 | opp_overlap 680030, overlap 680039 GCGAGCGTAGCGAAA CAATCCAGGGCCT AGCC AGACTCTGGATTG CACCGCTTCAATTGC TERM 498 680062 - 680039 - T 70 -7.4 -3.96483 | opp_overlap 680030, overlap 680036 AGCGTAGCGAAACAA TCCAGGGCCT AGCC AGACTCTGGA TTGCACCGCTTCAAT BRADO0656 680366 - 680100 - | hypothetical protein TERM 499 680421 - 680465 + r 85 -14.2 -3.54741 | CCGGCCGGCCAGCTC GTGCTCGGTCGGCAGCCGCC CGTCC GGCGTCAGCTGATCGATCAC TTTCGGCAGATACTG BRADO0657 680981 - 680400 - | putative sugar kinase TERM 500 681059 - 681040 - R 72 -12.1 -3.29043 | opp_overlap 681042, overlap 681017 AACGCGGCGTGACAA GCGGCGC GCCCGA GCGCCGC GCCTTGTGGCACGGG BRADO0658 681835 - 681185 - | hypothetical protein BRADO0659 682278 - 684401 + | putative phytoene dehydrogenase and related proteins; putative membrane protein BRADO0660 685368 - 684418 - | putative aminopeptidase; putative exported protein BRADO0661 686004 - 685387 - | hypothetical protein BRADO0662 686924 - 686001 - | putative spermidine synthase (methyl transferase) BRADO0663 688317 - 687163 - | RTX toxin/Ca2+-binding protein TERM 501 688497 - 688510 + H 76 -9.5 -3.9644 | opp_overlap 688489, overlap 688498 CAACGGAGCTGTGAT CGCGG ACCG CCGCG TTCTTCTGTTGCCGC TERM 502 688721 - 688735 + H 71 -9.2 -3.70902 | overlap 688684 688686 TCGCCCTCGGCGATC GCGGCG TTC TGCCGC TTTACGTGTCCCGGC BRADO0664 689985 - 690677 + | hypothetical protein TERM 503 690728 - 690707 - T 100 -13 -5.36441 | opp_overlap 690707 GTCGCAGACAAAAAA GCCGCGTC GTTTCG GACGCGGC TCGTTCGGCGTCACA BRADO0665 694292 - 690756 - | putative serine protease/outer membrane autotransporter precursor/membrane-associated phospholipid phosphatase TERM 504 695622 - 695587 - g 86 -17.6 -3.14132 | gap 1 CGCCGCGTGCAGGAA TGCGCTGGCGCTGCAGC CGG GCTAC-GCGCCGGCGCA CACCAATCTCGGCAT BRADO0666 694649 - 696790 + | TPR repeat-containing UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase BRADO0667 698042 - 696990 - | putative alkanal monooxygenase TERM 505 697219 - 697273 + g 73 -12.9 -3.27475 | gap 2, opp_overlap 697218, overlap 697220 697222 697237 GCCTCCTGCACGAAC TCGT-CGCGGCC-CATCGGTGGCCAGC CGC GCTCGCGGCCGATGCGGTCGCGCATGG TCTTGTAGTCCGGCC TERM 506 697723 - 697695 - G 85 -18.2 -2.71364 | gap 1, overlap 697683 GGATTCGGTGAACGA GCCGCGGCCGAGG ATGA CCTCGGC-GCGGC CGTTCGACACCGCGT BRADO0669 698858 - 699883 + | hypothetical protein TERM 507 700452 - 700462 + G 70 -8.2 -3.91897 | overlap 700451 CGCGCCATCATCGTC CGCG AGG CGCG TTTCTACGTCGCCGG BRADO0670 699906 - 700856 + | fatty acid desaturase TERM 508 701089 - 701118 + T 76 -10.8 -3.72695 | gap 1, opp_overlap 701070, overlap 701089 701092 CGCCACACAGACGGT G-TACCCTCTCCC CTTGT GGGAGAGGGTGGC TTTGATGCGCAGCAT TERM 509 701092 - 701114 + T 74 -14.9 -2.67803 | opp_overlap 701070, overlap 701089 701089 CACACAGACGGTGTA CCCTCTCCC CTTGT GGGAGAGGG TGGCTTTGATGCGCA TERM 510 701195 - 701138 - T 100 -18.5 -3.78953 | opp_overlap 701139 701186, overlap 701139 ATGCGCAGCATGAAA GCCGGGTGAGGGGTTGCCACGAACTCA GACC TGAATTTGTGGCGACCTCTCACCCGAG TGAGTTTGTGATTAC TERM 511 701139 - 701195 + T 100 -24 -2.7361 | gap 1, opp_overlap 701138 701139, overlap 701186 TGCGCAGCATGAAAG C-CGGGTGAGGGGTTGCCACGAACTCA GACC TGAATTTGTGGCGACCTCTCACCCGAG TGAGTTTGTGATTAC TERM 512 701194 - 701139 - T 100 -22 -2.87051 | opp_overlap 701139 701186, overlap 701138 TGCGCAGCATGAAAG CCGGGTGAGGGGTTGCCACGAACTCA GACC TGAATTTGTGGCGACCTCTCACCCGA GTGAGTTTGTGATTA BRADO0671 703346 - 701286 - | putative ATP-dependent DNA helicase TERM 513 705381 - 705330 - g 82 -16.1 -3.2614 | gap 3, overlap 705297 GATCGGGGAGACCAA GACGCTGAAGGCGCTCAATCCGGCGA AGT TCGCCG-A-CGAGCGC-TTCGGCGTC CCGACCGTTACCGAC BRADO0672 703543 - 705858 + | transcriptional accessory protein BRADO0673 705878 - 706522 + | putative nucleoside-diphosphate-sugar epimerase TERM 514 706547 - 706560 + F 71 -8.1 -3.93695 | ACCTCTTGCGGAGAC TGGCG ACCG CGCCA TTTATGAATAATCGA BRADO0674 706781 - 707857 + | putative di-haem cytochrome c peroxidase BRADO0675 707872 - 708195 + | putative blue (type 1) copper protein BRADO0676 708215 - 709873 + | putative methyl-accepting chemotaxis protein (with a HAMP region) TERM 515 710040 - 710024 - f 76 -6.5 -4.49344 | AAAGTTATGAGAAAA GCTTGAG GAT CTCATGC GTAGCTCGCTTCGAG BRADO0677 710037 - 711017 + | putative TRAP-dicarboxylate transporter, periplasmic component (DctP subunit) TERM 516 711358 - 711344 - g 70 -2.1 -4.60487 | GATGAGGTCGAAAAA CAGTC CGGCC AACTG AAGGTGATCGCTGAC TERM 517 713014 - 712972 - g 80 -17.1 -2.78816 | gap 2, opp_overlap 712975 713008 CGATGCGGGAGCAGA GGCCGCGCTCGCTGCCGCAGC CGC GCTGCAGCAGC-AG-GCGGCG TCGTTGCGGAGCAAC TERM 518 712975 - 713014 + G 77 -16.4 -2.70932 | gap 1, opp_overlap 712972, overlap 713008 TGCGGGAGCAGAGGC CG-CGCTCGCTGCCGCAGC CGC GCTGCAGCAGCAGGCGGCG TCGTTGCGGAGCAAC BRADO0678 711053 - 713068 + | putative methyl-accepting chemotaxis protein BRADO0679 713186 - 713815 + | putative hydrolase; putative exported protein BRADO0680 714031 - 715044 + | ABC transporter substrate-binding protein BRADO0681 715078 - 715851 + | ABC transporter ATP-binding protein BRADO0682 715904 - 716674 + | ABC transporter permease BRADO0683 717721 - 716684 - | gentisate 1,2-dioxygenase TERM 519 717243 - 717270 + g 70 -8.4 -3.92178 | gap 1, opp_overlap 717260 AGGGGAATGTCGAGG CCGTCGAGCCAGA ACA TC-GGCTCCGCGG TTTCGTTGCCATGAT maiA 717822 - 718454 + | maleylacetoacetate isomerase, MAAI (glutathione S-transferase zeta 1, GSTZ1-1) BRADO0685 718444 - 718953 + | MarR family transcriptional regulator BRADO0686 720605 - 718992 - | putative AMP-dependent synthetase and ligase BRADO0687 721741 - 720602 - | putative aromatic-ring hydroxylase TERM 520 721665 - 721679 + g 72 -11.4 -3.62046 | opp_overlap 721665 AACAGATCGACCACA GCGGCA GGG TGCCGC TTCTTCCAGAGATAG TERM 521 723020 - 722984 - g 72 -8.9 -4.13767 | gap 3, opp_overlap 722983 CGGCCTATCCGAAAA CGC-TCGAGG-GCCTGAA CAGG TTC-GGCGCCTCGAAGCG CATTTCAAGCTTCGT BRADO0688 722158 - 723453 + | putative sodium:dicarboxylate symporter BRADO0689 723466 - 724392 + | ABC transporter substrate-binding protein BRADO0690 725392 - 724430 - | hypothetical protein fpr 725681 - 726454 + | ferredoxin--NADP reductase TERM 522 726488 - 726514 + F 100 -15.9 -4.41494 | opp_overlap 726488 TAGGAATTCGTCAAA GAGCGCCTCGA CGCAA TCGGGGCGCTC TTTTCGTTGGCAATA TERM 523 726514 - 726488 - f 85 -14.4 -3.58037 | opp_overlap 726488 TAGGAATTCGTCAAA GAGCGCCTCGAC GCA ATCGGGGCGCTC TTTTCGTTGGCAATA TERM 524 726536 - 726561 + F 73 -8.3 -4.07568 | gap 1 TTGGCAATATCCTCC TTGCACGCGCTG AAG CGGC-CGTGCGA TTTTGAGCCGCAAGA BRADO0692 726665 - 728230 + | acyl-CoA synthetase TERM 525 728345 - 728371 + F 78 -15.2 -2.79915 | CCCAGTTTGGCACCC CCGTCGATAGCC ACA GGCTATCGACGA TGTGATACCGTCGAT BRADO0693 728414 - 730099 + | glutamate synthase domain-containing protein BRADO0694 731630 - 730329 - | ABC transporter ATP-binding protein TERM 526 731499 - 731531 + g 76 -6.1 -4.56597 | overlap 731501 ACGCCCCAGCAGCCC GACGATCTCGCCCGC GCG GATGGTGAGGTCGAC TTTTTCGAGCACGAC BRADO0695 733379 - 731646 - | ABC transporter permease BRADO0697 735735 - 734425 - | hypothetical protein TERM 527 735974 - 736006 + r 84 -8.4 -4.4009 | gap 1, overlap 735978 CACGTGAGTGTCCGC GGTATGGGTCCCGGC TTTC GCCGGGACG-ACACC TTTTGTGCCATGCGA TERM 528 736242 - 736292 + r 75 -14.1 -3.09635 | gap 1, opp_overlap 736250, overlap 736246 736250 GGCGTCATTGCGAGC GCAGCGAAGCAATCCA-AGGGCCG TGGG CGGGACTCTGGATTGCTTCGTCGC TTCGCTCCTCGCAAT TERM 529 736246 - 736288 + r 74 -14.3 -2.55544 | gap 1, opp_overlap 736250, overlap 736242 736250 TCATTGCGAGCGCAG CGAAGCAATCCA-AGGGCCG TGGG CGGGACTCTGGATTGCTTCG TCGCTTCGCTCCTCG BRADO0698 738404 - 736383 - | putative outer membrane protein A-like (OmpA-like) TERM 530 738629 - 738602 - R 100 -24.2 -4.1552 | CAGCTGTGCAACAAA CAGCCCGCCCGG GCGG CCGGGCGGGCTG TCGAGACGCGGATGG BRADO0700 739033 - 738758 - | hypothetical protein BRADO0701 740006 - 739179 - | putative creatinine amidohydrolase TERM 531 740381 - 740425 + G 74 -14.9 -3.01924 | opp_overlap 740369, overlap 740363 ACACGCTGATGGCGT TCGACGCGGTCGCCAACAACG TGC CGGTGGTGTCGATCGCGGCGA TGTTCCAGAAGGATC BRADO0702 740116 - 741117 + | ABC transporter periplasmic-binding protein BRADO0703 741143 - 741943 + | ABC transporter ATP-binding protein BRADO0704 741949 - 742755 + | ABC transporter permease BRADO0705 742755 - 743738 + | putative NAD-dependant oxidoreductase; putative phosphoglycerate dehydrogenase BRADO0706 743828 - 744427 + | putative metalloprotease inhibitor/calysin; putative signal peptide TERM 532 745128 - 745148 + G 83 -13.3 -3.86015 | overlap 745113 745131 GGCGATGTCGTCGAC GAGCGAGGC CTC GCCTCGTTC TTTATCGGCGGGCTC TERM 533 745131 - 745145 + G 82 -11.4 -4.06419 | overlap 745113 745128 GATGTCGTCGACGAG CGAGGC CTC GCCTCG TTCTTTATCGGCGGG TERM 534 745190 - 745218 + G 70 -11.5 -3.41051 | overlap 745191 CGTCACGCTGATCGC GGCCGCCGCGCTG GCA CTGCGCCGCGGCG TTCTGATGCCGCTGC TERM 535 745191 - 745217 + G 71 -15 -2.64416 | overlap 745190 GTCACGCTGATCGCG GCCGCCGCGCTG GCA CTGCGCCGCGGC GTTCTGATGCCGCTG BRADO0707 744564 - 746210 + | hypothetical protein BRADO0708 746314 - 746643 + | putative signal peptide BRADO0709 748102 - 746654 - | transcriptional regulator TERM 536 748261 - 748312 + G 81 -16.4 -3.14132 | gap 1, overlap 748304 CGGCATGACGATCTT CAGCGGCTCGCTGCCGGCGA-CGCG GGC CGCGCTCGAGGGCTTCGCGCCGCTG TTCCTGACCGGCGCG TERM 537 748934 - 748954 + G 77 -11.1 -3.87815 | ACGGCGAGCGTCGGA CAGCTGCAG CTG CTGCAGCCG TTTCTCGGCCTCGCC BRADO0710 748208 - 749068 + | putative inner membrane transport protein BRADO0711 749798 - 749079 - | hypothetical protein TERM 538 750712 - 750753 + G 71 -9.2 -3.86897 | CACGTTTCAGGATCT GCCGGGCTGCGACCGCAC CGCCGC GCGCGGTTGACGCACGGC TTTCTGCCGAGTGGA BRADO0712 749993 - 750745 + | transcriptional regulator radC 751504 - 750791 - | DNA repair protein RadC BRADO0714 752110 - 751571 - | hypothetical protein BRADO0715 753737 - 752100 - | hypothetical protein BRADO0716 753858 - 754640 + | hypothetical protein TERM 539 754660 - 754704 + F 84 -15.7 -3.28712 | ATCTAAGCTGTCGAG GCGCGGGCAGGCTCCGG GCCCATCTCCG CCGGGGTCTGCCCGCCC TTGTCCCCACGCAGA TERM 540 754815 - 754780 - f 76 -8.8 -4.18018 | opp_overlap 754791 TGCTGCGATGCAAAA TCTGGGCTTCACGGCG CCTA CGCCGTGTTGCACTGA TTGACCGTCCCGCCT TERM 541 755912 - 755938 + G 77 -15.9 -2.98942 | gap 1 ACGTTCTTCGTCGCC GGCGCCGCAGGC TCCG GCCT-CGGCGCC TATGTCTACGCGCAT BRADO0717 754844 - 756034 + | major facilitator superfamily (MSF) transporter TERM 542 756059 - 756041 - T 74 -11.7 -3.4252 | CGCGACTGATCAGAA CGGGCTG CGCTT CAGCCCG GGCACCAGCGCCGCC BRADO0718 756838 - 756035 - | putative intradiol ring-cleavage dioxygenase map 757756 - 756932 - | methionine aminopeptidase BRADO0720 759394 - 758066 - | mechanosensitive ion channel protein TERM 543 759537 - 759513 - H 76 -5.7 -4.59853 | GCAAGGGTGGAAAAA TGGGCATATCG CCG CGATATGAGCA AATCCGGTTGGCGTG TERM 544 759876 - 759907 + G 70 -13.1 -3.03159 | gap 1, overlap 759875 759878 CCGCACCGTGCTGGC GC-CGTCGATGGTG CTCGC CACCATCGGCGTGC TGTTGACGGCGTTCA TERM 545 759878 - 759904 + G 72 -14.5 -2.73994 | overlap 759876 759875 GCACCGTGCTGGCGC CGTCGATGGTG CTCGC CACCATCGGCG TGCTGTTGACGGCGT TERM 546 761035 - 761019 - g 78 -10.1 -4.07568 | opp_overlap 761014 GGCGCCGCCTGAAAA GGCCGAG TCG CTCGACC GCTTCTTCGTCGACA BRADO0721 759604 - 761397 + | potassium/proton antiporter BRADO0722 761602 - 761414 - | hypothetical protein TERM 547 761732 - 761748 + r 75 -4.4 -4.67904 | gap 1 CGCTGCACGTTCACC CGC-GGA CATG TCCAGCG TTTTTCCGCTTGATC BRADO0723 761945 - 761727 - | hypothetical protein BRADO0724 762564 - 762016 - | hypothetical protein mepA 763641 - 762700 - | penicillin-insensitive murein endopeptidase TERM 548 763272 - 763294 + g 71 -12.7 -3.28712 | CGATGTCGCCGACCA GGATGCCGG GCCAG CCGGCGTCC TTGTGCGCCCGGGCG TERM 549 763910 - 763889 - H 73 -8.7 -4.07687 | opp_overlap 763908 ATTCCTCGCCTAAAA CGAGAATCG ACGC CGAATCTCG CTCAATGAGAGATGG TERM 550 763923 - 763948 + H 78 -3.3 -5.01732 | opp_overlap 763923 TCGCTCAATGAGAGA TGGTATCAC TCTACATC GAGATACCA TTTTTTCAGAAACTT TERM 551 766139 - 766162 + G 70 -6 -4.25104 | gap 1, overlap 766147 TGTTCAGCCGCCCGC GGCCGAACG CCGAGAT CGT-CGGCC TTTTGCTGGCGCAGC BRADO0726 764071 - 766224 + | hypothetical protein ftrA 767418 - 766432 - | transcriptional activator FtrA TERM 552 767086 - 767143 + g 85 -17.6 -2.73364 | gap 2 GCAGATCGACAGGCA GCGGGCGCCGCGCGCGGAGGCTTGCGCG ATGG CGCGC-AGCAGCCGTTC-CGGCGGCCGC TCGTTGCGGTCGCGC BRADO0728 767537 - 767914 + | putative rhodanese-like sulfurtransferase BRADO0729 770084 - 768108 - | putative methyl-accepting chemotaxis protein (chemoreceptor) BRADO0730 770355 - 770900 + | hypothetical protein lepA 772810 - 770957 - | GTP-binding protein LepA TERM 553 773681 - 773706 + G 73 -14.7 -2.87211 | gap 1 CGCTGTCGGATCGCG GCCGCGCGGCCG CGC TGGCCG-GCGGC TATATCGGCCACAAT BRADO0732 772885 - 774489 + | hypothetical protein TERM 554 774570 - 774613 + T 86 -16 -3.21099 | gap 1 GACGTCGTGCCTCAG CTCGAGATTCC-GGGCTCGCG CTG CGCGCGCCCCGGAATGACGAG TTCGTGGTCACACGC ptsH 774950 - 774621 - | PTS system phosphocarrier protein HPr (histidine-containing protein) BRADO0734 775195 - 774947 - | PTS system permease (IIAMan), nitrogen regulatory IIA protein (fragment) BRADO0735 776004 - 775552 - | putative HPr kinase/phosphorylase TERM 555 775885 - 775857 - G 73 -12.4 -3.40403 | gap 1, opp_overlap 775841 CGTCGCCGACCAGAA CGGCCG-GCGGGA TCTG TCCGGCACGGCCG GCGAGAATCAGATCG chvG 777800 - 776001 - | two component sensor protein chvG (histidine kinase sensory protein exoS) TERM 556 777689 - 777672 - G 74 -7.7 -4.19624 | gap 1, overlap 777659 777654 CAGCGCGAACAGAAA CTGC-CCG GCG CGGCGCAG CCAGCTGACCGGACG chvI 778702 - 778001 - | two-component transcriptional regulatory protein ChvI BRADO0739 778919 - 779650 + | putative pyridoxamine 5'-phosphate oxidase-like, FMN-binding TERM 557 781007 - 780989 - g 74 -10.3 -3.7732 | CGGCGAGATGAAGAA GAGCGTG TTCAC CACGCTC AACTACTACCTGCCC pckA 780390 - 782003 + | phosphoenolpyruvate carboxykinase TERM 558 782015 - 782046 + T 95 -15.2 -4.07568 | gap 1, overlap 782018 GTAGGGCTGCAAGCT C-AAGGGTCAGCCGC GCT GCGGCTGCCCCTTCG TTTTCGCGCCAAAGC TERM 559 782018 - 782042 + T 100 -17.1 -3.66908 | overlap 782015 GGGCTGCAAGCTCAA GGGTCAGCCGC GCT GCGGCTGCCCC TTCGTTTTCGCGCCA BRADO0742 783067 - 782249 - | putative thioesterase/thiol ester dehydrase-isomerase glgP 785680 - 783173 - | glycogen phosphorylase TERM 560 785931 - 785942 + H 73 -3.6 -4.68645 | AGGCCCGACAAGTCG CTCC AATC GGGG TTTTCCTTTTCGATC BRADO0746 786364 - 786795 + | hypothetical protein BRADO0747 787632 - 786811 - | putative signal peptide TERM 561 787101 - 787066 - G 74 -14.7 -3.01712 | gap 1 GCGGGTGCCCGAATA GGCGACGAGGCCGTCG CTGGT CG-CGACCACGTCGCC GGGGCGCAGCGAGGT TERM 562 787853 - 787828 - R 76 -9.7 -4.08974 | gap 1 ACCGGATCAGAGAAA TTCGCGCGC-CT TGT AGAGCGCGCGGA ACGAGAGGCCGGCGG pyrE 788376 - 787819 - | orotate phosphoribosyltransferase TERM 563 788329 - 788279 - G 100 -16.1 -4.33258 | gap 1, opp_overlap 788311, overlap 788280 AGGTTGAAATAGAAA TCGCTCTTGCGGCCCGAGGCCAGG GTGA CCTCGCCGCGG-CCGAAAGAGCGC CTGCGGATGATCTCG TERM 564 788328 - 788280 - G 100 -19.6 -3.19232 | gap 1, opp_overlap 788311, overlap 788279 GGTTGAAATAGAAAT CGCTCTTGCGGCCCGAGGCCAGG GTGA CCTCGCCGCGG-CCGAAAGAGCG CCTGCGGATGATCTC BRADO0749 788597 - 789223 + | putative glutathione S-transferase BRADO0750 790847 - 789558 - | hypothetical protein TERM 565 790005 - 790052 + g 82 -15.6 -3.45945 | CCTGGCCCAGATGTC GCGGCCGTCGC-GCGTGTAGTG CGCGAT CACCAC-CGCCGCGTCGGCCGC TTCCTTGTCGGTCGC TERM 566 790568 - 790584 + g 70 -11.5 -3.37796 | AGTAGCCGGGCGCGG GCTCGCC GGC GGCGGGC TTGTAGGTCATCCAA BRADO0751 792089 - 790908 - | hypothetical protein TERM 567 792567 - 792583 + r 100 -12.3 -4.71222 | TCGTGGCTCAGTGCG TGCGGTC CGC GACCGCA TTTTCATTTTGCTAT TERM 568 793143 - 793116 - R 93 -18.4 -3.28712 | TGTCGTCCCGGACAA GCCGTGACGCGC GCCA GCGCGACACGGC GCCGATCCGGGATCC polA 796427 - 793323 - | DNA polymerase I TERM 569 794984 - 794961 - G 72 -13.8 -3.05596 | overlap 794963 GAGCCCGGCATCGAA CAGGCCGCCG CCAT CGCCGGCCTG GCGATGCGCCAGCGG BRADO0753 797690 - 796638 - | putative acyltransferase family protein rkpK 797842 - 799161 + | UDP-glucose 6-dehydrogenase (UDP-Glc dehydrogenase) (UDP-GlcDH) (UDPGDH) TERM 570 799403 - 799358 - g 72 -13.1 -3.18264 | overlap 799360 799396 GCTCGCACGCAGTAA CACCGCCGTCCTGGTGGCGCC GCCC GGCGCCGGCAAGACGACGCGG GTGCCGCTCGCCCTG TERM 571 799401 - 799360 - g 73 -14.3 -3.1552 | overlap 799358 799396 TCGCACGCAGTAACA CCGCCGTCCTGGTGGCGCC GCCC GGCGCCGGCAAGACGACGC GGGTGCCGCTCGCCC hrpB 799281 - 801755 + | ATP-dependent helicase BRADO0756 801916 - 802416 + | putative protease BRADO0757 802600 - 804099 + | putative phosphomannomutase/phosphoglucomutase (PMM / PGM) TERM 572 804108 - 804139 + T 100 -18 -3.86194 | GATCTGATACGCCAG GGCGAGCATGCCTC GCAC GAGGCGCGCTCGCC TTTGTCCAGGCAATT BRADO0758 805652 - 804162 - | putative methyl-accepting chemotaxis protein TERM 573 805679 - 805661 - R 75 -11.7 -3.56092 | TCATCATTGTGTAAA GCAGGCG GAGAT CGCCTGC GGGTCGATGACGAGC BRADO0759 805927 - 805649 - | hypothetical protein BRADO0760 806621 - 806121 - | AsnC/Lrp family transcriptional regulator BRADO0761 807675 - 806728 - | putative mutT/Nudix hydrolase family protein; putative NADH pyrophosphatase BRADO0762 808098 - 807679 - | putative histidine triad (HIT) protein BRADO0763 808492 - 810339 + | DNA polymerase III subunits gamma and tau BRADO0764 810360 - 810680 + | putative YbaB family protein recR 810701 - 811300 + | recombination protein RecR BRADO0766 811318 - 811746 + | hypothetical protein BRADO0767 813295 - 811913 - | major facilitator superfamily permease TERM 574 812506 - 812477 - G 71 -12.7 -3.24902 | overlap 812467 GAACAGCACGACGAA GGCGAGCGCGGCG AGCG CGTCGCGCCGGCC GAGGAATTCGACGAA BRADO0768 813685 - 813467 - | excinuclease ABC subunit C TERM 575 813703 - 813734 + r 70 -11.6 -3.23447 | gap 1, overlap 813701 GACGTCTCTGGGATA CTG-GATCGCCCGGT CAA GCCGGGCGATGACAG TCTTGTCGGAGTTGC BRADO0769 815022 - 813778 - | putative RmuC family protein TERM 576 814292 - 814318 + g 75 -13.6 -3.44527 | TGCCGCAGCACGTCG GTGCGCAGCTGC TGC GCGGCAGCGCGC TTCTCATCCTCGGTC def 815192 - 815719 + | peptide deformylase (PDF) (polypeptide deformylase) fmt 815861 - 816796 + | methionyl-tRNA formyltransferase truA 816913 - 817650 + | tRNA pseudouridine synthase A BRADO0773 817812 - 819869 + | putative methyl-accepting chemotaxis protein TERM 577 819885 - 819861 - T 73 -10.8 -3.59979 | gap 1 TTGGCGGAGGTGAAA GC-CGCCTGAT CCCG ATCAGGCGCGC CGCTCACGCGAAGTA dapE 821043 - 819889 - | succinyl-diaminopimelate desuccinylase dapD 821949 - 821104 - | 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase BRADO0776 823007 - 822312 - | pyrimidine 5-nucleotidase BRADO0777 824295 - 823228 - | hypothetical protein TERM 578 823419 - 823447 + g 78 -5.9 -4.64766 | overlap 823420 TGGTGCGGTTGTCGT CGTCGACCGCTTC CGC GAAGCTGTAGACC TTTTTCGGCTGTCCG TERM 579 823862 - 823920 + g 74 -15.9 -2.59564 | gap 2, overlap 823863 TTGGTCGGCGTCACC TGCGTGAACGCCGCCG-GCGTCTG-GCCG GTA CGGCACTGTCGCGCGGCGGCGATGACGAA ATTGTCGGATGCGGC argB 825278 - 824382 - | acetylglutamate kinase TERM 580 824898 - 824925 + g 73 -13.4 -3.25823 | gap 1, overlap 824900 GCCGTCCTTGCCGCA C-AGGCCGACGGC CTT GCCGCCGGCCTCG TTGATGTAGCCGACC TERM 581 824900 - 824922 + g 79 -16.2 -2.81547 | overlap 824898 CGTCCTTGCCGCACA GGCCGACGGC CTT GCCGCCGGCC TCGTTGATGTAGCCG BRADO0780 825723 - 825355 - | hypothetical protein TERM 582 825494 - 825445 - G 91 -17.1 -3.70902 | gap 1, overlap 825447 825492 CGCCGCATACGGAAA CAGCCGGTCGCCGGCGAACTGCCG CAT CAGCAGGTCGCCCGCGAACAGC-G CCGGGCCGAGCACGA TERM 583 825493 - 825447 - G 100 -20.8 -3.43773 | overlap 825445 825492 CCGCATACGGAAACA GCCGGTCGCCGGCGAACTGCCG CAT CAGCAGGTCGCCCGCGAACAGC GCCGGGCCGAGCACG BRADO0781 826379 - 825720 - | GTPase EngB oaxA 828380 - 826512 - | putative inner membrane protein translocase component YidC rnpA 828810 - 828403 - | ribonuclease P protein component (RNaseP protein) (protein C5) rpmH 828976 - 828842 - | 50S ribosomal protein L34 BRADO0785 829469 - 830944 + | putative sensor histidine kinase TERM 584 831238 - 831266 + T 76 -7.4 -4.34402 | opp_overlap 831237 TCGGCACCAAATGAC CCCAGACTATTG TGTCC CTTTAGTCTGGG TTTTAGTCTGGGGAA BRADO0787 831681 - 831451 - | putative transcriptional regulator TERM 585 831504 - 831490 - G 81 -4.2 -5.03314 | overlap 831491 CGGAGTTGCAAAAAA CTCGAC TGG GTCGAC CTTCAGCACCTCGGC BRADO0788 831774 - 832250 + | hypothetical protein TERM 586 832952 - 832941 - g 72 -7.2 -4.25104 | overlap 832924 CGCGTGCGATCAAAA GCGC GCTC GCGC CGCATGGCGCACAAC TERM 587 833111 - 833084 - g 72 -15 -2.70932 | gap 1, overlap 833055 833101 833102 833105 GTCCCCGTGCAATCA TCGGCCTGTCGAT CAA ATCGAC-GGCCGA AGCCGAGGCAGCCCC BRADO0790 832772 - 833137 + | putative thiamine-phosphate diphosphorylase BRADO0791 833151 - 833423 + | thiamine-phosphate pyrophosphorylase (TMP pyrophosphorylase) (TMP-PPase) (thiamine-phosphate synthase) (fragment) BRADO0792 835609 - 833507 - | hypothetical protein BRADO0793 836512 - 835631 - | hypothetical protein TERM 588 836386 - 836375 - G 77 -3.6 -4.73614 | opp_overlap 836381, overlap 836371 836377 CAGCAGCAAAAGAAA GCCG ATGG CGAC AGCCGCCTTCTCGAA BRADO0794 837531 - 836911 - | hypothetical protein BRADO0795 838044 - 838274 + | hypothetical protein BRADO0796 841292 - 838281 - | putative conjugal transfer protein, traA TERM 589 838701 - 838713 + g 85 -10.5 -4.2573 | CCGCACCTCCTCGAA GGCCC GGC GGGCC TTTTGCAGTTCTTTC BRADO0798 841832 - 841737 - | hypothetical protein BRADO0797 841463 - 841789 + | putative conjugal transfer protein, traC TERM 590 842179 - 842151 - fH 85 -10.1 -4.36914 | opp_overlap 842137, overlap 842154 TGCCCTCCCAGAAAA GTAGGCGGGGCTG CTT CCGCCCTGCCGAC GCGCGCGCCGCTGCC BRADO0799 842357 - 844099 + | hypothetical protein TERM 591 845107 - 845049 - g 79 -6.7 -4.62783 | gap 2, overlap 845052 GACGGAGTTCAAAAA GGACGAGATCGACGGC-T-GCATGGAAGC GCT GCATCTGTGCGAAGCGGTCGACCTCGTGC AGGTGGTGGAGGACA TERM 592 845196 - 845175 - g 73 -13.7 -3.12847 | overlap 845163 AAGCGGCAGAGGCAA GCCGACCGG CTAT CCGGTCGAC CGCGGCACCCTGATC BRADO0800 844096 - 845514 + | hypothetical protein BRADO0801 846985 - 845774 - | hypothetical protein BRADO0802 847472 - 847690 + | hypothetical protein TERM 593 847727 - 847744 + G 70 -8.4 -3.97947 | TGGCAGTCCGACTTG CCTGGC CGCATC GCCAGG TTTGTGATCCGTGAC BRADO0803 847724 - 847987 + | hypothetical protein BRADO0804 848048 - 848824 + | hypothetical protein BRADO0805 848988 - 849896 + | hypothetical protein TERM 594 850605 - 850645 + F 70 -10.4 -3.60971 | gap 1, opp_overlap 850603 850604 ACGCCTATACCAACC CGAGTCCGGTCG-CGTCGT TTGG GCGACGGCGGCCGCAGTCG TTTGCCGCTTCGCAT TERM 595 851008 - 851050 + G 70 -2.4 -4.63218 | CTGACGGTCGCCGAA CTTGATGAGCGCGATGCCGG CGA CCTGCGGCGCGATCCCGAAG TTTTGTTGGCACCGG BRADO0807 850867 - 852099 + | putative subtilisin-like serine protease BRADO0808 852784 - 853998 + | putative trypsin-like serine protease TERM 596 857028 - 857048 + G 77 -12.6 -3.62775 | opp_overlap 857022 CGCCTGAAAGCCGAC CGCCTGCA CGGAT TGCAGGCG TTCTTCGACGATCAT BRADO0809 853995 - 857090 + | hypothetical protein BRADO0810 857209 - 857060 - | hypothetical protein TERM 597 857627 - 857637 + G 72 -5.4 -4.3467 | opp_overlap 857624 857627, overlap 857624 TTCCAGATGCAACGA TCGA TCA TCGA TTTTGATGTGACCAT TERM 598 858356 - 858340 - g 84 -5.7 -4.90906 | GTACAAGACCAAAAA CGACCTG GTG CCGGCCG AATTCGAGATCGACC TERM 599 859228 - 859207 - g 73 -10.9 -3.71284 | GTCCGACGAAGAGAA CGACCGCAA GTAT TTGCGATCG AGGCTCGACGTGCTG BRADO0811 857228 - 859474 + | hypothetical protein BRADO0812 859526 - 861946 + | hypothetical protein BRADO0813 863821 - 862019 - | hypothetical protein TERM 600 862085 - 862110 + g 81 -14.7 -3.53811 | GGTGTCCGCGAGATT GCCAGCTGCGG ATCT CCGCAGGTGGC TTTGGGCGAGGTGGC TERM 601 863743 - 863726 - G 100 -7.7 -5.4477 | gap 1, opp_overlap 863726 863725 AAATTCGCAAAAAAA GGC-CGGA CTG TCCGCGCC GTTTCTGGATATCAG BRADO0814 863927 - 864982 + | hypothetical protein BRADO0815 866270 - 864954 - | hypothetical protein TERM 602 865538 - 865517 - G 70 -10.8 -3.53012 | GGCCGGCGCTGGAAA GCGCCGGC AGGGAG GCCGGCAC GGATGCGCCCTCGAA BRADO0817 868472 - 867180 - | putative phage integrase hisC 868768 - 869841 + | histidinol-phosphate aminotransferase TERM 603 869979 - 869935 - T 79 -13.6 -3.53091 | gap 2, opp_overlap 869934 869938, overlap 869936 ATCCGCGCGTGCAAA GC-CGGTCGCGAGGA-CGGCGC CTC GCGCCACTTCTCGCGATCGAGC GTTCAATGCGCGGCG TERM 604 869977 - 869936 - T 72 -13.7 -2.71712 | gap 1, opp_overlap 869934 869938, overlap 869935 TCCGCGCGTGCAAAG CCGGTCGCGAGGA-CGGCGC CTC GCGCCACTTCTCGCGATCGA GCGTTCAATGCGCGG cheB 871076 - 869982 - | chemotaxis response regulator protein CheB-glutamate methylesterase TERM 605 870645 - 870686 + g 72 -11.5 -3.54424 | gap 2, overlap 870646 CTTCTCGATCATGGG ACGG-CGCGCG-GCACGCG GCCGGA CGCGGGCACGCGCGGCCGA TTTCACCGCATCGCG TERM 606 870646 - 870685 + g 72 -15 -2.72511 | gap 2, overlap 870645 TTCTCGATCATGGGA CGG-CGCGCG-GCACGCG GCCGGA CGCGGGCACGCGCGGCCG ATTTCACCGCATCGC cheR 871914 - 871090 - | chemotaxis protein methyltransferase cheW 872440 - 871952 - | chemotaxis protein cheW BRADO0822 874336 - 872522 - | methyl-accepting chemotaxis receptor (MCP) TERM 607 873207 - 873231 + g 71 -14.9 -2.53382 | overlap 873226 GTCTGCATCGCCTCG ACGGCGCGGCC CAC GGCCGTGCCGC TGGCTTCGGCATCCT TERM 608 874413 - 874432 + r 74 -12.8 -3.33261 | ACCGCTTGAAGTCGT CGTCGCGG TCAT CCGCGGCG TTGTCGAGGTTGAAG BRADO0823 876096 - 874393 - | methyl-accepting chemotaxis protein (MCP) TERM 609 874461 - 874493 + g 71 -12.6 -3.27525 | gap 1, opp_overlap 874454, overlap 874465 AGGCGAAACCCGAGC CGCCGGCG-GCGACG CGTG CGGCGCGCGCCGGCC TTGCCTTTGGCGCGG cheW 876589 - 876125 - | chemotaxis protein cheW cheA 878646 - 876589 - | chemotaxis protein cheA BRADO0826 879040 - 878717 - | hypothetical protein BRADO0827 880219 - 879242 - | putative cobalamin biosynthesis protein CobT TERM 610 879553 - 879518 - G 72 -14 -2.96692 | gap 1, opp_overlap 879520 879521 CAGGATGATGAGATA TTTGCGCGGCTCGCGAC GTT GTCGC-AGCCGCGCTAC GGCCCAGGCGACCGC BRADO0828 881118 - 880267 - | hypothetical protein TERM 611 880425 - 880470 + gr 76 -9.5 -3.99324 | GCGCCACGGCCATCA GCAGCTCGTGCTCGCGCGG GGCGCGGG CCGCGCGGGCGTGCACGGC TTTGTAGTCCTGGAG TERM 612 880493 - 880518 + gr 81 -12.5 -3.72576 | overlap 880494 TCCTGGAGCGCAGCA TGGCCGGCGCG CGTC CGTGTCGGCCG TTTCATCAGCACGAA TERM 613 880494 - 880517 + gr 74 -13.8 -2.83403 | overlap 880493 CCTGGAGCGCAGCAT GGCCGGCGCG CGTC CGTGTCGGCC GTTTCATCAGCACGA BRADO0829 881669 - 881091 - | hypothetical protein BRADO0830 882418 - 881741 - | Zn-dependent protease BRADO0831 882629 - 882375 - | hypothetical protein BRADO0832 882824 - 882639 - | hypothetical protein BRADO0833 884018 - 882825 - | hypothetical protein TERM 614 883834 - 883877 + g 100 -23.1 -3.53012 | gap 1 AGCCAGCTCGCCACC CGCGGCGCCGAGCCGCCGAG ACCGC CGCGGCGGC-CGCCGCCGCG TTTGCCGCCGGAGCC BRADO0834 884941 - 884015 - | putative signal peptide TERM 615 884777 - 884808 + g 70 -10.8 -3.53811 | gap 1 GACGTCGCTGGTCGC CGCCGAGCGCTGCTG CAG CAGC-GCGATCGTCG TTTCCGCGGCCTCGC BRADO0835 886399 - 885023 - | hypothetical protein BRADO0836 887537 - 886401 - | putative ATPase family protein BRADO0837 888928 - 887534 - | hypothetical protein TERM 616 888455 - 888445 - G 70 -2.4 -4.63218 | TCCGCTCGAAGAAAA GGCC TTT GGCT GCTTCCTCATCGGAG BRADO0838 890394 - 888931 - | hypothetical protein BRADO0839 892188 - 890518 - | hypothetical protein TERM 617 892108 - 892089 - G 73 -10.6 -3.65812 | opp_overlap 892103 CGCTTTTCAAGAGAA GCGGGCCG GTGC CGGCGCGC AGCGCTGTGTCCGAT BRADO0840 893776 - 892622 - | putative signal peptide BRADO0841 894943 - 893993 - | oxidoreductase BRADO0843 895206 - 896441 + | hypothetical protein BRADO0844 897017 - 896577 - | hypothetical protein BRADO0845 897409 - 897092 - | hypothetical protein BRADO0846 897752 - 898150 + | hypothetical protein TERM 618 898328 - 898280 - T 81 -13.1 -3.74747 | overlap 898248 898282 TCAAGCGCGATGAAA CACGACGGGCAACTTCCTCAATC CAG GCATGAGCAAACTGCCCGTCGAG CCAGTATGTCGCAGG TERM 619 898326 - 898282 - T 83 -14.3 -3.45592 | overlap 898280 AAGCGCGATGAAACA CGACGGGCAACTTCCTCAATC CAG GCATGAGCAAACTGCCCGTCG AGCCAGTATGTCGCA TERM 620 899084 - 899129 + T 86 -18.3 -2.81702 | gap 1, opp_overlap 899078, overlap 899081 ACGATACCAGTTCAC GCGCAAGGGCGCGGTGTGATGT TCG GC-TCGCACCGCGCCAGTGCGC TACTTCCTGATCTTC BRADO0847 901168 - 899129 - | hypothetical protein BRADO0848 901990 - 901295 - | hypothetical protein BRADO0849 902097 - 902786 + | putative haloacid dehalogenase-like hydrolase; putative phosphoglycolate phosphatase BRADO0850 902965 - 904944 + | hypothetical protein TERM 621 905009 - 905055 + T 100 -23.8 -2.85668 | opp_overlap 904956 904996, overlap 905022 CAGCTCGCCGTCACC GCGGCTGGCGCAATGGTCGCAT CGC ATGCGGCCGTTGCGTCGACCGC TCTGATCTGAAGGTG BRADO0852 906112 - 905519 - | hypothetical protein TERM 622 906029 - 906047 + g 78 -5.9 -4.5774 | TTCACGCAAATCTGC GGCCAGC ACGAC GATGGCC TTTTCATTGTTCGTG TERM 623 906313 - 906341 + H 73 -11 -3.58726 | gap 1 TCGAGGACCGCATTT GCGTCA-TGCCGG ATGT CCGGCAGTGCCGC TTGTCTCTCGGCGCC BRADO0853 906429 - 907262 + | hypothetical protein TERM 624 907921 - 907955 + G 78 -6.5 -4.58395 | gap 2, overlap 907925 ACGTGGCCTGGGTCA TCCGACGCATCGGCCAG CCG CTGGTCGATGAG--GGA TTTTTCGCCGATGCG BRADO0854 907299 - 908129 + | putative glutamine amidotransferase, class-I BRADO0855 908844 - 908134 - | putative murein hydrolase export regulator, LrgB family protein BRADO0856 909169 - 908819 - | hypothetical protein BRADO0857 909349 - 910230 + | LysR family transcriptional regulator TERM 625 910252 - 910236 - f 76 -10.1 -3.91084 | GGAGGCGTAAGCAAA GCGCGAC GAT GTCGCAC GTCACATGAGGGAAC TERM 626 910436 - 910420 - g 77 -3.6 -4.82855 | GAGCAAAGCCAAAAA GGTGGA GCCAT TCCGCC CGCTGGTCCGCACGC BRADO0858 910333 - 910539 + | hypothetical protein BRADO0859 910668 - 911495 + | putative glutamine amidotransferase, class-II BRADO0860 911520 - 913289 + | asparagine synthetase BRADO0861 913309 - 914541 + | carboxylate-amine ligase BRADO0862 915750 - 914548 - | cytosine deaminase TERM 627 915181 - 915156 - G 72 -14.1 -3.04144 | overlap 915113 GCGCGACGCCGAACA CGACATCGAGA TGCT TCTCGACGTCG CGATCGAAGCTCGCC TERM 628 915767 - 915797 + r 74 -12.5 -3.35996 | overlap 915768 GATCCTCCTGACGCC AGCATCGGACCGC GAACG GCGGCCCGATGCA TTGTCGATCAGGATC TERM 629 915768 - 915796 + r 80 -16 -2.61383 | overlap 915767 ATCCTCCTGACGCCA GCATCGGACCGC GAACG GCGGCCCGATGC ATTGTCGATCAGGAT BRADO0863 916472 - 915840 - | putative phospholipase/carboxylesterase family protein BRADO0864 917407 - 916469 - | putative glyoxalase/bleomycin resistance protein/dioxygenase family protein BRADO0865 917544 - 918437 + | transcriptional regulator BRADO0866 918529 - 918885 + | putative transthyretin-like protein TERM 630 919678 - 919709 + G 72 -13.6 -3.16881 | gap 1 ACTGTCGTCTCGTCG GC-CGCCCGGGCCGC GCC GCGGCGCTGGCGCGC TTCCTCGACTACGTC BRADO0867 918891 - 920318 + | putative polysaccharide deacetylase family protein BRADO0868 921785 - 920427 - | putative glutamyl-tRNA(Gln) amidotransferase subunit A (Glu-ADT subunit A) TERM 631 920733 - 920715 - G 95 -8.1 -5.252 | gap 1, opp_overlap 920727, overlap 920716 GACGTCCAGAAAAAA CGCG-GCG AAGG CGCGCGCG ATCCGTGCGCTTGCC BRADO0869 922962 - 921772 - | major facilitator superfamily permease TERM 632 921821 - 921804 - G 77 -14.1 -3.44051 | GCTCCATCAGGAGAA CGGCCGC TCCG GCGGCCG CCATCAGTCCAAGGG TERM 633 922170 - 922122 - G 76 -15.2 -3.17051 | overlap 922120 CGGCCATCACCAACA CGGCGCGCGC-GGAGCGCAGCCGC GTC GCTACCGCGCCCCAGC-CGAGCCG GCCAACGAGGCCCGC BRADO0870 922992 - 923333 + | putative transthyretin-like protein BRADO0871 924316 - 923501 - | ABC transporter permease BRADO0872 925194 - 924313 - | ABC transporter permease BRADO0873 926245 - 925199 - | ABC transporter substrate-binding protein BRADO0874 927355 - 926270 - | putative ABC transporter ATP-binding protein TERM 634 927398 - 927386 - R 91 -3.3 -5.40072 | TTCGTTTGAAAAAAA GCAAG AAC CGTGC CGCCTTTTCAGGCAG BRADO0875 928275 - 927526 - | putative Hydantoin racemase TERM 635 928032 - 928018 - G 70 -10 -3.63515 | CGGCACGTCGAACAA TTCGCG CGC CGCGAA CAGGCCGGGATCGCC BRADO0876 928811 - 928341 - | hypothetical protein BRADO0877 928993 - 928817 - | hypothetical protein BRADO0878 929777 - 929001 - | putative Short-chain dehydrogenase/reductase (SDR) family protein; putative glucose/ribitol dehydrogenase BRADO0879 930001 - 930750 + | putative ABC transporter ATP-binding protein TERM 636 932116 - 932132 + G 72 -13.7 -3.06133 | overlap 932122 GGCGCCGGCAGACCT CGTCGCG GCT CGCGACG TTCGCTGAAGCCTTC TERM 637 932199 - 932230 + G 81 -8.6 -4.44667 | overlap 932190 932187 932183 932200 ATCGCGCTGCCGGAA GCCGCAGTGATCTG TGGT CTGATCACCGCGGG TTTGTTGTTCGCGGC TERM 638 932200 - 932229 + G 71 -12.1 -3.26318 | overlap 932190 932187 932183 932199 TCGCGCTGCCGGAAG CCGCAGTGATCTG TGGT CTGATCACCGCGG GTTTGTTGTTCGCGG BRADO0880 930747 - 932273 + | putative permease BRADO0881 933205 - 932279 - | alpha/beta family hydrolase BRADO0882 933316 - 934134 + | putative metal-dependent hydrolase BRADO0883 934589 - 934137 - | putative RmlC-like cupin family protein BRADO0884 934917 - 935381 + | putative signal peptide TERM 639 935426 - 935463 + T 89 -16.4 -3.53444 | gap 1, opp_overlap 935429 935431, overlap 935431 GGGACATTGCAATGA CAAG-AGGGCCGGAGCA GATCG TGCTCCGGCCCTTCATG TTTCAGGCCCACTCG TERM 640 935459 - 935429 - T 93 -16.9 -3.52093 | opp_overlap 935426 935431, overlap 935431 ACATTGCAATGACAA GAGGGCCGGAGCA GATCG TGCTCCGGCCCTT CATGTTTCAGGCCCA TERM 641 935431 - 935457 + T 100 -19.5 -3.45571 | opp_overlap 935429 935431, overlap 935426 ATTGCAATGACAAGA GGGCCGGAGCA GATCG TGCTCCGGCCC TTCATGTTTCAGGCC TERM 642 935457 - 935431 - T 95 -19.5 -3.33214 | opp_overlap 935431 935426, overlap 935429 ATTGCAATGACAAGA GGGCCGGAGCA GATCG TGCTCCGGCCC TTCATGTTTCAGGCC BRADO0885 936722 - 935466 - | peptidase M29, aminopeptidase II TERM 643 936925 - 936951 + H 82 -15 -3.28712 | overlap 936936 GGGTCCCGGATCGAC GCCGCGCCGCGC GTG GCGCGTCACGGC TTGTCCGGGACGACG TERM 644 936936 - 936971 + H 71 -8.9 -3.95073 | gap 1, overlap 936925 CGACGCCGCGCCGCG CGTGGCG-CGTCACGG CTTGT CCGGGACGACGCCGAG TTTGTCGATATGACG TERM 645 937859 - 937908 + H 100 -20.7 -3.62478 | GGGTGCACCGCTGCA CTCAGCAGTCGTCCCAGCGAAGG CATG CGTTCGCAGGGACGACAGCGGAG TTTGGAGCTTCGTTC TERM 646 937952 - 937971 + H 84 -4.2 -5.14563 | gap 1, overlap 937956 TCGTTCTCCGCGTCG TGCTCCGCG AAA CGCGGT-CA TTTTTTCCTCCCGGG TERM 647 938071 - 938082 + H 72 -7.2 -4.20531 | overlap 938065 CCGCGTCAGCGGGCA GCGG CGTC CCGC TTTTGCATGGCTCTC BRADO0887 938182 - 938775 + | hypothetical protein BRADO0888 939545 - 938946 - | putative glyoxylase family protein BRADO0889 940623 - 939907 - | short chain dehydrogenase TERM 648 940473 - 940520 + g 70 -13.4 -3.01712 | gap 1, opp_overlap 940502 GCTTCAGCGGCACGA TCT-TGTCGGTGCGCGCGAGGCC CGA GACATCGCGCGCAGCGGCGTAGA TCTTGGCGGCGCCGC TERM 649 940541 - 940502 - G 76 -15.7 -2.87931 | opp_overlap 940473 GCGAGGCCCGAGACA TCGCGCGCAGCGGCG TAGATCTTGG CGGCGCCGCGCGCGA GCAGCTCGGCGACGA BRADO0890 941480 - 940620 - | peptide ABC transporter ATP-binding protein TERM 650 941010 - 940953 - G 86 -18.3 -3.21099 | gap 1 GTCGGCGACGATGAA GTCGGGCTG-CAGCGCGAGCGCACGCGC AAT GCCGGCGCGCTGGCGCTGGCCGCCGGAC AATTCATGCGGATAG BRADO0891 942352 - 941477 - | peptide ABC transporter ATP-binding protein BRADO0892 943248 - 942349 - | peptide ABC transporter permease BRADO0893 944252 - 943245 - | peptide ABC transporter permease BRADO0894 945808 - 944267 - | peptide ABC transporter substrate-binding protein TERM 651 945485 - 945515 + g 72 -13.2 -3.17212 | GGAGCCGTCATGCCA GGTCGCGTCGGAGC GCA GCTCCATCGTGACC TTGGTGCGGTCCTCG BRADO0895 947142 - 945898 - | putative carboxymethylenebutenolidase (dienelactone hydrolase)(DLH) TERM 652 946569 - 946585 + g 76 -15.1 -3.16564 | opp_overlap 946555 946579 ACTCGGCGTCGTCGC GGCCGGC AAA GCCGGCC TTGATCGCCTCGCGC TERM 653 947171 - 947194 + H 78 -4.6 -4.79174 | gap 1 GGTCCTGCCAGCGTC CACAGTGACGC CGG GCCTCA-TGTG TTTTCTTCATTGAAT BRADO0896 947298 - 947942 + | putative transcriptional regulatory protein BRADO0897 949259 - 947949 - | multidrug ABC transporter transmembrane protein TERM 654 950342 - 950314 - g 73 -13.9 -3.16564 | TGTCGAGCTGATCAA GCGCGATCCCG GCAGGCT CAGGATCGCGC TGTCGCATCAATGGG BRADO0898 949547 - 951022 + | putative amidase BRADO0899 951762 - 951043 - | putative signal peptide TERM 655 951791 - 951836 + H 70 -9.8 -3.65046 | gap 3, opp_overlap 951776, overlap 951796 GTCATGTCACGCCCC GTGGCCGGA-CCTCTGC-CGCGC ATG GCGCGTGC-GAGGTTCCGATTAC TTGTTGAACTCAACA TERM 656 953968 - 953922 - g 100 -19.6 -3.33696 | overlap 953926 GCGCTGGCCAACGAA TTCACATTGGTGCCGATCACGA TCA CCGTGACCGGCACCAATGACAA GCCGCAGATCTCGTC TERM 657 953964 - 953926 - g 100 -24.8 -2.60244 | overlap 953922 TGGCCAACGAATTCA CATTGGTGCCGATCACGA TCA CCGTGACCGGCACCAATG ACAAGCCGCAGATCT BRADO0900 952383 - 958793 + | VBCS repeat-containing protein BRADO0901 958900 - 961134 + | adenylate/guanylyl cyclase TERM 658 961173 - 961155 - T 75 -11.6 -3.53811 | opp_overlap 961142 GGTAGGGTGGGCAAA GCGGCGCC GCA GGCGACGC GTGCCCACCGCGATG TERM 659 961203 - 961246 + T 70 -8 -4.1021 | gap 1, overlap 961204 961218 GTATTGACGGTGCGG ATGGACGGTGGGC-ACGGCGC TGC GCGCCTTTGCCCACCCTACGA TTTGTCGTTGTGGCA TERM 660 961218 - 961230 + T 70 -10.5 -3.53811 | overlap 961204 961203 ATGGACGGTGGGCAC GGCGC TGC GCGCC TTTGCCCACCCTACG BRADO0902 962998 - 961415 - | ABC transporter substrate-binding protein BRADO0903 963205 - 964878 + | putative oligopeptide ABC transporter (substrate binding protein) BRADO0904 965009 - 965962 + | putative oligopeptide ABC transporter (permease protein) BRADO0905 965971 - 966867 + | putative oligopeptide ABC transporter (permease protein) TERM 661 967006 - 966961 - f 80 -14.7 -3.12668 | opp_overlap 967001 967002 CATCGCCAGATGCAA TCCGGGTGAGGGGTCTGTCTC CGCG GACACAGACCCCTCATCCGTC GCGGACTGCGTCCGC BRADO0906 967079 - 968128 + | putative oligopeptide ABC transporter ATP-binding protein BRADO0907 968157 - 968354 + | hypothetical protein BRADO0908 968351 - 969763 + | putative glutamyl-tRNA(Gln) amidotransferase subunit A (Glu-ADT subunit A) TERM 662 969904 - 969878 - f 77 -13.6 -3.28712 | TGTCGTCCCGGACAA GCCTGACGTCGC GCA GCGGCGGCAGGC GCAGAGCCGGGACCC BRADO0909 970071 - 971051 + | putative oligopeptide ABC transporter ATP-binding protein TERM 663 971410 - 971440 + G 72 -11.9 -3.53091 | gap 1 ATCATCCTGCTGCTC GTCGTTCGCCTGGT ACGG ACC-GGCGGACGGC TTTAAGGCCGCGAGT BRADO0910 971176 - 971445 + | putative transglycosylase-associated protein TERM 664 973026 - 973005 - g 77 -7.9 -4.32436 | ACATCATCATCAAAA TGCGCGACG GCTA CGACACGCA GATCGGCGAACAGGG BRADO0911 971633 - 973381 + | HlyB family ABC transporter ATP-binding protein TERM 665 974014 - 974053 + G 70 -10.7 -3.53811 | opp_overlap 974000 974001, overlap 974015 AGGAGCTCGACGGCG TGCGCCAGCTCTACGAG CAGCAC CTCGTGCAGCTGTCGCG TTTGACGACGCTGGA BRADO0912 973395 - 974732 + | HlyD family secretion protein TERM 666 974891 - 974917 + T 82 -15 -3.28712 | GGATCCCGGATCGGC GCCCGCCGCCGC TTC GCGCCGGCGAGC TTGTCCGGGACGACG TERM 667 975082 - 975108 + T 100 -17.2 -3.61398 | opp_overlap 975059 GGGTCCCGGATCGGC GCCCGCCGGCGC TGC GCGTCAGCGGGC TTGTTCGGGACGACA BRADO0913 975611 - 975129 - | putative competence-damaged protein TERM 668 975195 - 975211 + g 72 -11.5 -3.55444 | CTGCATGTTGGCGAA GCGGTCG GTG CGGCCGC TTTCCAGCGTCACCA TERM 669 975671 - 975648 - R 100 -18.2 -5.27335 | GGCCGCAAACAAAAA GGGCGGCATC GGAT GATGCCGCCC TTGGCGTCAACAAAC TERM 670 975734 - 975689 - R 81 -10.4 -4.20367 | GGCGTCAACAAACAA GCCGATCAGGCCGCGGCAG-GC TCGC GCGCCGCCACCGCCTGCT-GGC CGCCGCGATAGACGG citA 977007 - 975694 - | citrate transporter BRADO0915 978048 - 977128 - | DNA-binding transcriptional activator GcvA BRADO0916 978185 - 978364 + | hypothetical protein TERM 671 978381 - 978424 + F 76 -9.3 -4.07568 | opp_overlap 978347, overlap 978383 978384 CCCCTCACTCGGCCC GCCCCGCCGGCGCCGCTCC GCGATG GGAGCCGCGCCGGCACCTC TTTTCCCAGGAGCCC TERM 672 978383 - 978422 + F 70 -10.5 -3.63744 | opp_overlap 978347, overlap 978381 978384 CCTCACTCGGCCCGC CCCGCCGGCGCCGCTCC GCGATG GGAGCCGCGCCGGCACC TCTTTTCCCAGGAGC TERM 673 978384 - 978421 + F 72 -14 -2.78032 | opp_overlap 978347, overlap 978383 978381 CTCACTCGGCCCGCC CCGCCGGCGCCGCTCC GCGATG GGAGCCGCGCCGGCAC CTCTTTTCCCAGGAG BRADO0917 978512 - 979030 + | hypothetical protein TERM 674 979392 - 979418 + T 74 -10 -3.82202 | overlap 979393 TGGTGGGCACGTCGC CCCGCGTGATGC TGC GCGTCCCGCGGC TTGTCTTTGCCCATG TERM 675 979393 - 979417 + T 74 -13.5 -2.88839 | overlap 979392 GGTGGGCACGTCGCC CCGCGTGATGC TGC GCGTCCCGCGG CTTGTCTTTGCCCAT BRADO0918 980152 - 979451 - | putative 3-oxoacyl-[acyl-carrier-protein] reductase BRADO0919 981274 - 980255 - | hypothetical protein TERM 676 982525 - 982571 + G 75 -11.5 -3.71649 | gap 2 CTGGATCGCGCCGAG GCCGGCAGCCAGGACGCCGCGGC GCT GCTGC-GCATCCTGAC-GCCGAC TTTAAAATTTCGCGC BRADO0920 981385 - 983169 + | putative acyl-CoA dehydrogenase TERM 677 983226 - 983255 + F 88 -14.4 -3.72695 | gap 1, overlap 983226 983229 CGCCACGCGCTCGGT G-CACCCTCTCCC CTTGT GGGAGAGGGTGGC TTTCATGCGCAGCAT TERM 678 983226 - 983254 + F 77 -14.6 -2.83403 | overlap 983226 983229 CGCCACGCGCTCGGT GCACCCTCTCCC CTTGT GGGAGAGGGTGG CTTTCATGCGCAGCA TERM 679 983229 - 983251 + F 74 -14.9 -2.67803 | overlap 983226 983226 CACGCGCTCGGTGCA CCCTCTCCC CTTGT GGGAGAGGG TGGCTTTCATGCGCA adh 983456 - 984544 + | alcohol dehydrogenase TERM 680 984581 - 984611 + T 70 -12.5 -2.87132 | TCGACGATGGTTGCC CGTCATGCCCGGG CTTGA CCCGGGCATCCCG TCTCTCCCGAAAGGA BRADO0922 986301 - 984832 - | amidase BRADO0923 986913 - 986383 - | putative cytochrome b561 TERM 681 986983 - 986950 - R 78 -15.3 -2.70932 | GGTTTGGCGCAATCA GGATCGCGGCCGG AAGTTCCG CCGGCCGCGATCG ATGCTAGGCCGCCCC BRADO0924 987958 - 986987 - | hypothetical protein BRADO0925 988160 - 988882 + | hypothetical protein TERM 682 989166 - 989141 - T 95 -16.1 -3.90112 | opp_overlap 989163 TCTCCCGCAACGAAA GAGCGCCGACC TCGC GGCCGGCGCCC TCCGGGCTTTCACCT BRADO0926 989594 - 989190 - | hypothetical protein BRADO0927 990739 - 989669 - | putative epoxide hydrolase TERM 683 990988 - 991013 + r 85 -14.7 -3.62046 | opp_overlap 990971 GTTGCTTTGAGCTGC GGGCGCGGC CCGCTTAC GCCGCGCCC TTCTTCGGCCAGTAG BRADO0928 992536 - 991001 - | acyl-CoA synthetase TERM 684 991480 - 991500 + g 71 -9 -3.80841 | opp_overlap 991475 991473 991458 991459 CGGCGAAATAGACCG TGCCGATC TCGCC GGTCGGCA TTTCCTGATCATCCT TERM 685 992641 - 992620 - R 74 -11.6 -3.53012 | GGGGCTGTGGTGAAA GCGAGCTG TGGCTC CAGCTCGC GTAACGTTGGATTCG BRADO0929 993882 - 992710 - | acetyl-CoA acetyltransferase BRADO0930 994020 - 994679 + | TetR family transcriptional regulator TERM 686 994717 - 994663 - f 73 -12.9 -3.12327 | opp_overlap 994669 994672 994679, overlap 994661 GCGGGATACTGAAGA GGGCGAATGGCGAATAGGGAGTATC TATTC GCTACTCCCTTTTCGCTATTCGCTA AAAATAAACAAAGGA TERM 687 994672 - 994708 + F 75 -13.8 -3.08996 | opp_overlap 994663 994661, overlap 994669 994679 TGAAGAGGGCGAATG GCGAATAGGGAGTATC TATTC GCTACTCCCTTTTCGC TATTCGCTAAAAATA TERM 688 994679 - 994701 + F 76 -7.7 -4.28656 | opp_overlap 994663 994661, overlap 994669 994672 GGCGAATGGCGAATA GGGAGTATC TATTC GCTACTCCC TTTTCGCTATTCGCT Hadh2 994744 - 995502 + | 3-hydroxyacyl-CoA dehydrogenase (short-chain) TERM 689 995723 - 995765 + G 70 -6.3 -4.17316 | overlap 995725 TCAATCGTCCGGAGA GCCT-GAACGCGCTCGATCCG GCG CTGATCGA-CGCGCTCAATGC TTATTTTGAAAGCCT BRADO0932 995632 - 996462 + | putative enoyl-CoA hydratase BRADO0933 996504 - 998372 + | acyl-CoA synthetase BRADO0934 998547 - 999674 + | putative acyl-CoA dehydrogenase TERM 690 999882 - 999894 + F 70 -10.5 -3.53811 | opp_overlap 999840 GGGATTGGTGGGCAC GGCGC GTT GCGCC TTTGCCCACCCTACG TERM 691 1000132 - 1000100 - g 79 -11.1 -4.02817 | CTGGCAGAAGAAGAA GGCCGATGCCGGCTG GGC CTGCCTGCACTGGCC GAAGGAGTATGGCGG TERM 692 1000701 - 1000718 + G 74 -12.7 -3.55548 | overlap 1000691 CGCATGTCGATCGGC GCCGGTG TTGC CACCGGC TTTCCCGAGCTGTTC BRADO0935 999927 - 1001171 + | putative acyl-CoA dehydrogenase BRADO0936 1001292 - 1002539 + | putative acyl-CoA dehydrogenase TERM 693 1003019 - 1003000 - g 78 -15 -3.31144 | TTTCCAGCTCTACAA CGCGCTCG GGAT CGAGCGCG GCGACAAGGCCGGCT BRADO0937 1002722 - 1003369 + | putative nitroreductase BRADO0941 1004631 - 1003948 - | putative autoinducer (acylhomoserine lactone) synthase BRADO0940 1003818 - 1004012 + | hypothetical protein BRADO0942 1005442 - 1004714 - | putative N-acyl homoserine lactone transcriptional regulator, LuxR-like BRADO0943 1006403 - 1005606 - | putative enoyl-CoA hydratase BRADO0944 1007515 - 1006400 - | hypothetical protein TERM 694 1007788 - 1007767 - H 81 -10.1 -4.17132 | AAATTGGGCAAGAAA CGGCCGAAC GCGC GTTCGCCCG TCCGAGCAGCAAAGG BRADO0945 1007820 - 1008488 + | hypothetical protein TERM 695 1008569 - 1008579 + G 79 -8.2 -4.37886 | overlap 1008539 1008538 ATCGGCGACCATGAC GGCG AGC CGCC TTTTCTGCCCGATGG BRADO0946 1008509 - 1009390 + | hypothetical protein TERM 696 1009401 - 1009378 - f 77 -13.8 -3.38072 | overlap 1009379 CGCACCGAACAGCAA CGCCGCGGAG TGAG CTCCGCGGCC GGCGTTGCCGCGGCT TERM 697 1009400 - 1009379 - f 83 -17.3 -2.62522 | overlap 1009378 GCACCGAACAGCAAC GCCGCGGAG TGAG CTCCGCGGC CGGCGTTGCCGCGGC BRADO0947 1009687 - 1010037 + | hypothetical protein BRADO0948 1010162 - 1010554 + | hypothetical protein BRADO0949 1010896 - 1010564 - | hypothetical protein BRADO0950 1011587 - 1010889 - | hypothetical protein TERM 698 1010934 - 1010953 + g 70 -10 -3.6292 | gap 1, opp_overlap 1010918 GCTGCGCCGCCATTT GGCGCGCAG CGC CT-CGCGCC TTTCAGGATATTTGT BRADO0951 1011681 - 1011809 + | hypothetical protein TERM 699 1012205 - 1012222 + G 74 -12.7 -3.59979 | opp_overlap 1012205 1012204 GACCGCCGCGAGAAG CTGCGCG AGGA CGCGCAG TTTCGCGTCGCCGAG BRADO0952 1011806 - 1012534 + | hypothetical protein BRADO0953 1013281 - 1012649 - | hypothetical protein BRADO0954 1013397 - 1014281 + | LysR family transcriptional regulator BRADO0955 1014811 - 1014398 - | putative thioesterase/thiol ester dehydrase-isomerase TERM 700 1015179 - 1015164 - g 72 -8.2 -4.04141 | TAACAATGAAGCAAA GGGCCC TCGA AGGCCC GCGATGGAAGGAGAC BRADO0956 1015154 - 1016221 + | TRAP dicarboxylate family transporter DctP subunit BRADO0957 1016365 - 1016874 + | TrapT family, dctQ subunit C4-dicarboxylate transport BRADO0958 1016881 - 1018200 + | TRAP dicarboxylate family transporter DctM subunit BRADO0959 1018197 - 1018676 + | hypothetical protein TERM 701 1018771 - 1018794 + T 84 -16 -3.09635 | gap 1 CTTGGCGGATGTCAT CGGG-CCGCGC TTT GCGCGGACCCG TTGGCTGCTCGCAAT BRADO0960 1019441 - 1019079 - | putative signal peptide BRADO0961 1019963 - 1020268 + | hypothetical protein BRADO0962 1020488 - 1021288 + | enoyl-CoA hydratase BRADO0963 1021290 - 1023191 + | feruloyl-CoA synthase Hadh 1023216 - 1023980 + | 3-hydroxyacyl-CoA dehydrogenase (short-chain) TERM 702 1024055 - 1024005 - f 100 -25.1 -3.09635 | gap 2, opp_overlap 1024008 1024013 1024017, overlap 1024009 1024013 1024017 ATTGCGAGGAGCGAA GCG-A-CGAAGCAATCCAGAGTCCC GAT GGGACCCTGGATTGCTTCGCTTCGC TCGCAATGACGGAGA TERM 703 1024008 - 1024050 + F 100 -23.6 -3.06183 | opp_overlap 1024005 1024009 1024013 1024017, overlap 1024013 1024017 GCGAGGAGCGAAGCG ACGAAGCAATCCAGAGTCCC GAT GGGACCCTGGATTGCTTCGC TTCGCTCGCAATGAC TERM 704 1024049 - 1024009 - f 100 -29.3 -2.55544 | opp_overlap 1024008 1024013 1024017, overlap 1024005 1024013 1024017 CGAGGAGCGAAGCGA CGAAGCAATCCAGAGTCCC GAT GGGACCCTGGATTGCTTCG CTTCGCTCGCAATGA TERM 705 1024045 - 1024013 - f 100 -22.9 -3.22388 | opp_overlap 1024013 1024008 1024017, overlap 1024009 1024005 1024017 GAGCGAAGCGACGAA GCAATCCAGAGTCCC GAT GGGACCCTGGATTGC TTCGCTTCGCTCGCA TERM 706 1024013 - 1024045 + F 95 -20.7 -3.19192 | opp_overlap 1024009 1024005 1024013 1024017, overlap 1024008 1024017 GAGCGAAGCGACGAA GCAATCCAGAGTCCC GAT GGGACCCTGGATTGC TTCGCTTCGCTCGCA TERM 707 1024017 - 1024041 + F 83 -14.3 -3.40788 | opp_overlap 1024013 1024009 1024005 1024017, overlap 1024013 1024008 GAAGCGACGAAGCAA TCCAGAGTCCC GAT GGGACCCTGGA TTGCTTCGCTTCGCT TERM 708 1024041 - 1024017 - f 89 -16.5 -3.41581 | opp_overlap 1024017 1024013 1024008, overlap 1024013 1024009 1024005 GAAGCGACGAAGCAA TCCAGAGTCCC GAT GGGACCCTGGA TTGCTTCGCTTCGCT TERM 709 1024150 - 1024117 - f 76 -13.1 -3.53224 | gap 1, opp_overlap 1024127, overlap 1024090 1024091 1024118 CACCGCCGCTGGAAA TGGTGGGC-ACGGCGC TGA GCGCCTTTGCCCACCC TACGGACCGCCATCG TERM 710 1024149 - 1024118 - f 81 -16.6 -2.71791 | gap 1, opp_overlap 1024127, overlap 1024090 1024091 1024117 ACCGCCGCTGGAAAT GGTGGGC-ACGGCGC TGA GCGCCTTTGCCCACC CTACGGACCGCCATC TERM 711 1024127 - 1024139 + F 70 -10.5 -3.53811 | opp_overlap 1024090 1024091 1024118 1024117 GGAAATGGTGGGCAC GGCGC TGA GCGCC TTTGCCCACCCTACG BRADO0965 1024190 - 1024609 + | putative 4-hydroxybenzoyl-CoA thioesterase BRADO0967 1024810 - 1025970 + | branched chain amino acid ABC transporter substrate-binding protein TERM 712 1026020 - 1026000 - f 100 -18.3 -3.85698 | opp_overlap 1026000 GCTTCGTTTGAGAAA GGCCGGCTC GGT GAGCCGGCC TTTCGGCCATCTGGA TERM 713 1026000 - 1026020 + F 100 -18.3 -3.56643 | opp_overlap 1026000 GCTTCGTTTGAGAAA GGCCGGCTC GGT GAGCCGGCC TTTCGGCCATCTGGA BRADO0968 1026066 - 1026872 + | putative shikimate dehydrogenase livF 1027627 - 1026902 - | ABC transporter, ATP-binding protein; putative branched-chain amino acid transport protein BRADO0970 1029393 - 1027624 - | ABC tranpsorter, permease protein (N-ter) and ATP-binding protein (C-ter); putative branched-chain amino acid transport protein BRADO0971 1030422 - 1029397 - | ABC transporter, permease protein; putative branched-chain amino acid transport protein BRADO0972 1030631 - 1031137 + | MarR family transcriptional regulator BRADO0973 1032431 - 1031151 - | putative hydroxypyruvate reductase; putative glycerate kinase TERM 714 1032516 - 1032494 - R 95 -16.3 -3.8646 | opp_overlap 1032491 GATGAAGAAGGCAAA CCCCGCAGG TCGAG CCTGCGGGG CCATGTTCGCGCCGG BRADO0974 1033765 - 1032566 - | branched chain amino acid ABC transporter periplasmic-binding protein TERM 715 1034062 - 1034036 - R 100 -20.2 -4.72272 | TGCGCGCATGAAAAA GCCCTCCGTGCC GGT AGCACGGAGGGC CAGTGTAGATCGGCA BRADO0975 1035340 - 1034117 - | branched chain amino acid ABC transporter periplasmic-binding protein BRADO0976 1036367 - 1035351 - | high-affinity branched-chain amino acid ABC transporter permease BRADO0977 1037248 - 1036370 - | high-affinity branched-chain amino acid ABC transporter permease livF 1037975 - 1037262 - | high-affinity branched-chain amino acid ABC transporter ATP-bincing protein livG 1038769 - 1037972 - | high-affinity branched-chain amino acid ABC transporter ATP-bincing protein BRADO0980 1039731 - 1038766 - | IclR family transcriptional regulator TERM 716 1041001 - 1040967 - g 83 -13.4 -3.82824 | GATCATGCAGAAGAA CTGGGAAGCGACCGCG GCG CGCGGCGGCATCCCGG CGGATGCCCCGGCGA pimF 1039945 - 1042038 + | enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase TERM 717 1042932 - 1042961 + G 72 -5.6 -4.33907 | gap 1, overlap 1042931 1042930 GGACCCAGCATGACG GCGGCGAC-CGCG TCATC TGCGTGCTGCCGC TTTTCCATATTTATG BRADO0982 1042220 - 1043884 + | putative long-chain-fatty-acid--CoA ligase; putative long-chain acyl-CoA synthetase; pimeloyl-CoA ligase pimA TERM 718 1045043 - 1045071 + G 72 -13.7 -3.04792 | opp_overlap 1045025 1045023 CGTCGTCACCATGTG CGTCGGCGGCGGC ATG GGCGCCGCCGGCC TATTCGAGGTGCTGC pimB 1043904 - 1045091 + | acetyl-CoA acetyltransferase TERM 719 1045107 - 1045129 + F 81 -13.4 -3.56099 | opp_overlap 1045100 1045101 CAAAGACAGCTGTCG TCCCGGGCGA AGC TCGCGCGGGA TTTCAAACAATTGTC TERM 720 1045223 - 1045196 - f 100 -21.4 -3.28712 | overlap 1045177 TGTCGTCCCGGACAA GCCTGCAAGCGC TACA GCGCTTGCAGGC GCAGATCCGGGACCC BRADO0984 1045381 - 1046571 + | putative acyl-CoA dehydrogenase; pimeloyl-CoA dehydrogenase pimC (large subunit) BRADO0985 1046746 - 1047888 + | putative acyl-CoA dehydrogenase; pimeloyl-CoA dehydrogenase pimD (small subunit) TERM 721 1047944 - 1047900 - f 77 -15.2 -2.60079 | gap 2, opp_overlap 1047896 1047893, overlap 1047896 CTAGCTCACAAGTGA CCCCGTCATTGCGAG-G-AGCG AAG CGCTTCGCTCGCAATGACGGCA GTGCAGGTTTCGTAG BRADO0986 1048062 - 1048835 + | SDR family dehydrogenase/reductase TERM 722 1048856 - 1048885 + F 78 -14.4 -3.05463 | gap 1, overlap 1048859 CTCCGCACGACGGCT G-CACCCTCTCCC CTTGT GGGAGAGGGTGGC TTCGATGCAAAGCAT TERM 723 1048859 - 1048881 + F 74 -14.9 -2.54896 | overlap 1048856 CGCACGACGGCTGCA CCCTCTCCC CTTGT GGGAGAGGG TGGCTTCGATGCAAA glpK 1049159 - 1050661 + | glycerol kinase BRADO0988 1051460 - 1050684 - | arylesterase (Aryl-ester hydrolase) BRADO0989 1051687 - 1052280 + | hypothetical protein BRADO0990 1052317 - 1052973 + | putative glutathione transferase BRADO0991 1054227 - 1053208 - | putative signal peptide TERM 724 1053855 - 1053887 + g 78 -9.8 -4.07618 | gap 2, overlap 1053857 CGACGCCATCCTCGG CG-CGTCGCCGGG-GC CCT GCGCCCGACGGCGTCG TTTCCTTGTTGCGCA BRADO0992 1054931 - 1054224 - | putative ABC transporter, ATP-binding protein TERM 725 1054472 - 1054530 + g 78 -14.6 -3.28712 | gap 3 TGCCGACGATGGCAC GCGC-GATCGC-GACGCGC-TGCTGCTCG CCGC CGGACAGCTCGCGCGGCAGCGATCTGCGC TTCTGGCCGAGACCG BRADO0993 1056073 - 1054940 - | putative ABC transporter, permease protein metH 1060265 - 1056411 - | B12-dependent methionine synthase TERM 726 1056927 - 1056965 + g 77 -13 -3.53811 | opp_overlap 1056939 CACGCGGGCGTGCAG GCGCTCGGCAAACGCCTC GGC GAGGCGGTCGGCCAGCGC TTTCACCAGGATCGA TERM 727 1056953 - 1056939 - G 72 -11.4 -3.53224 | opp_overlap 1056927 CAGGCGCTCGGCAAA CGCCTC GGC GAGGCG GTCGGCCAGCGCTTT TERM 728 1057827 - 1057860 + g 70 -10.3 -3.64103 | gap 1, overlap 1057823 CGACGGCGTGATCAG GCCGGAGAG-GCCGAT GAT GTCGGCATTCTCCGCC TTTGCGGTGTCGATG metF 1061182 - 1060265 - | 5,10-methylenetetrahydrofolate reductase TERM 729 1061821 - 1061843 + G 70 -4 -4.56597 | overlap 1061822 ACTGGTGGTCGCCGA ACGCTTCAAG ATG CTGGAGGCGC TTTTTCCGGGCCGGA BRADO0996 1061636 - 1062574 + | putative monooxygenase with luciferase-like ATPase activity TERM 730 1062765 - 1062734 - T 71 -10.9 -3.41051 | gap 1, opp_overlap 1062728 GCATGCTGAGGACAA CGTGAATGCCCGGG ACAAG CCCGGGCATG-ACG GAGTACCTCGTTGGC BRADO0997 1063482 - 1062817 - | putative flavin reductase BRADO0998 1063605 - 1064507 + | LysR family transcriptional regulator pheA 1065477 - 1064617 - | prephenate dehydratase kdsB 1066266 - 1065496 - | 3-deoxy-manno-octulosonate cytidylyltransferase TERM 731 1066061 - 1066110 + g 86 -16.3 -3.61398 | GCCGCGGTCACCGCC GCGGCGATCTCCGGCGTGTCGGT CGCC ACCGCCACGCGACCGATCGCCGC TTCTTCCGCACGGCG BRADO1001 1066477 - 1067025 + | cytochrome c-like protein TERM 732 1067051 - 1067073 + F 100 -17.7 -4.34402 | AGCTCTGATTTTGGA CGGCCGGGC CCCAA GCCCGGCCG TTTTGCTATCCGAGG TERM 733 1067182 - 1067158 - f 86 -8 -4.78107 | gap 1, opp_overlap 1067157 1067158 TATCATGAGGAAAAA GCAAGGTTATC GGTC GA-AACCTTGC CTTATATTGTCCGCC BRADO1002 1067402 - 1069246 + | oligopeptide ABC transporter periplasmic substrate-binding protein TERM 734 1069267 - 1069306 + F 90 -17.8 -2.93723 | gap 1, overlap 1069262 1069268 ATCTCGCATCTGTCC CGCCGCCGCGTGCTCGGGC TGG GCCTGGGCGCGCT-CGGCG TCTCCTTGCTGAAGC TERM 735 1069527 - 1069560 + G 73 -13.1 -3.21747 | CATCCTCAAGGGCGA GGGCGCGCAGGGCAT GGCG ATGACCTTCGCGTCC TTGATGGTGCCATCG BRADO1003 1069276 - 1071120 + | oligopeptide ABC transporter periplasmic substrate-binding protein BRADO1004 1071124 - 1072236 + | oligopeptide ABC transporter membrane protein BRADO1005 1072296 - 1073414 + | oligopeptide ABC transporter membrane protein BRADO1006 1073433 - 1075070 + | oligopeptide ABC transporter ATP-binding protein TERM 736 1075304 - 1075336 + T 74 -10.6 -3.76402 | opp_overlap 1075303 1075307, overlap 1075307 GCGAGCGCAGCGAAG CAATCCAGAGTCGC AGGGC GGGACCCTGGATTG TTTCGTCGCTGCGCT BRADO1007 1076752 - 1075478 - | putative signal peptide BRADO1008 1077597 - 1076749 - | hypothetical protein BRADO1009 1077750 - 1079102 + | hypothetical protein TERM 737 1079830 - 1079808 - T 77 -14.9 -2.87132 | GCTCTGTCCTACATA CCCTCTCCC GCAAG GGGAGAGGG CGCAGTCACGAGCAG BRADO1010 1080809 - 1079964 - | NLP/P60 family protein BRADO1011 1082130 - 1080802 - | leucine aminopeptidase TERM 738 1081410 - 1081435 + g 81 -5.3 -4.72272 | overlap 1081397 1081413 TCTGGGCCAGCGCCA GCACGTTGGCG GCGC CGCCCATGTCC TTTTTCATCAAGAGC TERM 739 1082642 - 1082623 - g 70 -10.6 -3.61398 | GGCGCTGCGCAACAA CGGCCAGC GCGA GCAGGCCG TCGCGGTGCTGGAGC BRADO1012 1082378 - 1083208 + | putative signal peptide BRADO1013 1084474 - 1083215 - | allantoate amidohydrolase TERM 740 1083908 - 1083954 + g 80 -17.1 -2.62184 | opp_overlap 1083905 GGCTTCCAGATAGCC GATATGCCGGCCGCGCGCGGC ATGCA GGCGCGGGCGGCCGGCAAGGC TCATCTCGGCGAGCG BRADO1014 1085513 - 1084539 - | putative pilus assembly protein; putative membrane protein BRADO1015 1086499 - 1085525 - | putative pilus assembly protein; putative membrane protein TERM 741 1086175 - 1086164 - G 70 -3.6 -4.56597 | GCCGCCCGCGAAAAA CGCG ACCG CGCA TACGACGAAGCCGAG TERM 742 1086524 - 1086559 + r 86 -8.2 -4.64676 | gap 1 CCTTATTCCTTGGCC GCGGCT-TCGGCCGC ATCGAGC GCCGCCGCCAGCCGC TTTTCTTCGCCATAA BRADO1016 1087812 - 1086511 - | putative secretory protein kinase, cpaF-like gene BRADO1017 1089264 - 1087996 - | putative pilus assembly protein cpaE TERM 743 1089191 - 1089163 - G 75 -13.7 -3.28924 | opp_overlap 1089178, overlap 1089179 CACCGTCTCGCAGAA CGCCTGCACCGAG ACA CGCGGCGCCGGCG CGATATGATCGTCGG BRADO1018 1090001 - 1089261 - | putative pilus assembly protein cpaD; putative signal peptide BRADO1019 1091527 - 1090025 - | putative pilus assembly protein cpaC; putative signal peptide BRADO1020 1092270 - 1091524 - | putative pilus assembly protein, cpaB BRADO1021 1092972 - 1092448 - | putative type IV prepilin peptidase, cpaA TERM 744 1092741 - 1092705 - G 95 -17.4 -3.93369 | gap 2, overlap 1092706 CGAAGCCGAACCAAA GCGCGGCGGCCGACGCCA CCT TGGCATCG-CCGCCGC-C GATCCAGCCGAATGC TERM 745 1092741 - 1092706 - G 86 -17.6 -2.95539 | gap 1, overlap 1092705 GAAGCCGAACCAAAG CGCGGCGGCCGACGCCA CCT TGGCATCG-CCGCCGCC GATCCAGCCGAATGC TERM 746 1093283 - 1093249 - R 100 -21.6 -3.57462 | opp_overlap 1093256, overlap 1093256 GAGCTGACGTTGAAA CAATAAAGGCCCCGGA AGT TCCGGGGCCTTTTTTG CTCGGTCGTGACGAC TERM 747 1093276 - 1093256 - R 100 -18.3 -4.56978 | opp_overlap 1093256, overlap 1093249 CGTTGAAACAATAAA GGCCCCGGA AGT TCCGGGGCC TTTTTTGCTCGGTCG TERM 748 1093256 - 1093276 + r 100 -18.3 -5.1675 | opp_overlap 1093249 1093256 CGTTGAAACAATAAA GGCCCCGGA AGT TCCGGGGCC TTTTTTGCTCGGTCG BRADO1023 1093442 - 1093302 - | putative Flp/Fap pilin component TERM 749 1094069 - 1094085 + G 77 -3.7 -4.72986 | overlap 1094067 AGCGCGAGCTCGTCA CCGATAT GGT GTATTGG TTTTTCGTGCCGGTG BRADO1024 1093912 - 1094739 + | hypothetical protein BRADO1025 1094936 - 1095373 + | hypothetical protein BRADO1026 1095668 - 1096216 + | putative signal peptide BRADO1027 1096236 - 1096814 + | hypothetical protein TERM 750 1096907 - 1096877 - T 100 -17 -4.36914 | opp_overlap 1096877 1096884, overlap 1096884 TCGTCCCTCAGAAAA CGAAAAAGGCCGCT GCA AGCGGCCTTTTTTG TTTCGACGTTCTCTG TERM 751 1096877 - 1096907 + T 100 -19.2 -3.63305 | opp_overlap 1096877 1096884, overlap 1096884 TCGTCCCTCAGAAAA CGAAAAAGGCCGCT GCA AGCGGCCTTTTTTG TTTCGACGTTCTCTG TERM 752 1096884 - 1096900 + T 100 -13.7 -5.63517 | opp_overlap 1096877 1096884, overlap 1096877 TCAGAAAACGAAAAA GGCCGCT GCA AGCGGCC TTTTTTGTTTCGACG TERM 753 1096900 - 1096884 - T 100 -13.7 -5.1417 | opp_overlap 1096884 1096877, overlap 1096877 TCAGAAAACGAAAAA GGCCGCT GCA AGCGGCC TTTTTTGTTTCGACG TERM 754 1096939 - 1096995 + T 81 -15.2 -3.05384 | gap 2, opp_overlap 1096943 1096954, overlap 1096944 1096945 1096982 ATCCGCGTCGCGTAA CGAAGTCCGAGCAGAGCTGAAGGCAACC GGT GGTCGCCTTCAGCGC-GCGCGG-CTTAG TTGGCTGCGCGGAGA TERM 755 1096991 - 1096943 - T 88 -16.8 -3.33696 | gap 2, opp_overlap 1096939 1096944 1096945 1096982, overlap 1096954 GCGTCGCGTAACGAA GTCCGAGCAGAGCTGAAGGCAACC GGT GGTCGCCTTCAGCGC-GCGCGG-C TTAGTTGGCTGCGCG TERM 756 1096944 - 1096991 + T 82 -14.8 -3.37344 | gap 1, opp_overlap 1096943 1096954, overlap 1096939 1096945 1096982 CGTCGCGTAACGAAG TCCGAGCAGAGCTGAAGGCAACC GGT GGTCGCCTTCAGCGC-GCGCGGC TTAGTTGGCTGCGCG TERM 757 1096945 - 1096990 + T 86 -18.3 -2.62192 | gap 1, opp_overlap 1096943 1096954, overlap 1096944 1096939 1096982 GTCGCGTAACGAAGT CCGAGCAGAGCTGAAGGCAACC GGT GGTCGCCTTCAGCGC-GCGCGG CTTAGTTGGCTGCGC TERM 758 1096982 - 1096954 - T 90 -19.7 -2.79831 | opp_overlap 1096945 1096944 1096939, overlap 1096943 CGAAGTCCGAGCAGA GCTGAAGGCAACC GGT GGTCGCCTTCAGC GCGCGCGGCTTAGTT cspA 1097204 - 1096992 - | cold shock protein, DNA binding TERM 759 1097411 - 1097433 + r 91 -17.7 -3.18511 | CGCACGATTTTTTGA CGCGCCGGC GGGCA GCCGGCGCG TTGGATGTGTCTCTG infA 1097796 - 1097506 - | translation initiation factor IF-1 BRADO1030 1099242 - 1097821 - | ATP-dependent RNA helicase TERM 760 1098050 - 1098067 + g 78 -10.5 -4.12188 | TTCTGCATGCCAGGA CGGCCGC CGCC GTGGCCG TTTTGGCGCTGGTGC TERM 761 1099472 - 1099506 + H 74 -9.2 -3.84719 | overlap 1099480 TTTCAAGGCCGTTGC GCAACGGGTTGGCGCT GCA GGCGGTAACCTGCTGC TTTAAATTTAGCCAT BRADO1031 1099752 - 1101074 + | branched chain amino-acid ABC transporter substrate-binding protein TERM 762 1101102 - 1101133 + F 86 -16.7 -3.21099 | gap 1, opp_overlap 1101108, overlap 1101103 1101108 GACGTCGTGACGACC G-GAGAAGGCGGCG ACCTC CGCCGCCTTCTCTC TTCCTCCTGCCGGGG TERM 763 1101103 - 1101131 + F 95 -20.4 -3.17051 | opp_overlap 1101108, overlap 1101102 1101108 ACGTCGTGACGACCG GAGAAGGCGGCG ACCTC CGCCGCCTTCTC TCTTCCTCCTGCCGG TERM 764 1101108 - 1101126 + F 81 -13.1 -3.71124 | opp_overlap 1101108, overlap 1101103 1101102 GTGACGACCGGAGAA GGCGGCG ACCTC CGCCGCC TTCTCTCTTCCTCCT TERM 765 1101126 - 1101108 - f 77 -13.8 -3.34043 | opp_overlap 1101108 1101103 1101102 GTGACGACCGGAGAA GGCGGCGA CCT CCGCCGCC TTCTCTCTTCCTCCT TERM 766 1101529 - 1101494 - g 73 -11 -3.63515 | gap 1, opp_overlap 1101505, overlap 1101471 GGTGAGCCTCAACAA CCGCC-TGCGCCGCACC GTG GACGCCGCGCTCGGCGG CCTGACGCTGCTGTC BRADO1032 1101207 - 1102769 + | branched chain amino acid ABC transporter permease BRADO1033 1102766 - 1103929 + | branched chain amino acid ABC transporter permease BRADO1034 1103934 - 1104695 + | putative branched-chain amino acid ABC transporter ATP-binding protein BRADO1035 1104700 - 1105395 + | putative branched-chain amino acid ABC transporter ATP-binding protein TERM 767 1106166 - 1106133 - g 73 -14.5 -2.89683 | gap 1, opp_overlap 1106123 1106121 AGCGCATCCGAGAGA GCCTGCC-GGCCTCCC GTG GGGAGGCCGGGCTGTC CGCCTGGAATGGATT BRADO1036 1105454 - 1106290 + | putative urease accessory protein UreD ureA 1106381 - 1106641 + | urease gamma subunit (Urea amidohydrolase gamma subunit) ureB 1106773 - 1107078 + | urease subunit beta BRADO1039 1107095 - 1107622 + | putative metal-dependent phosphohydrolase BRADO1040 1107619 - 1108146 + | hypothetical protein ureC 1108190 - 1109905 + | urease subunit alpha BRADO1042 1109953 - 1110252 + | hypothetical protein ureE 1110280 - 1110912 + | urease accessory protein UreE ureF 1110899 - 1111621 + | urease accessory protein UreF TERM 768 1111633 - 1111662 + F 81 -9.9 -4.20516 | opp_overlap 1111631 1111632 1111626, overlap 1111642 TTGACGAAGCAAATC CCGCTCGGCGC AACGGTCG GCGCCGGGCCG TTTCTTGCATCCCGA ureG 1111761 - 1112384 + | urease accessory protein UreG TERM 769 1114180 - 1114212 + G 84 -13.4 -3.90744 | gap 1, overlap 1114211 CTGCTCGACCGGGTG GCGC-CCGAGGCGCT CGGC GGCGCCTCGAAGCGC TTCTTTACCGAAGGC BRADO1046 1112674 - 1114329 + | signal transduction histidine kinase TERM 770 1114365 - 1114404 + T 100 -12 -4.58395 | opp_overlap 1114371, overlap 1114370 1114371 1114373 ACTCGTTCTTCCAAC GCAAAAGAGGCGGCCGCC GCGA GGAGGCCGCCTCCTTCTC TTTTTACAGAATGCG TERM 771 1114370 - 1114399 + T 93 -14.9 -4.07746 | opp_overlap 1114371, overlap 1114365 1114371 1114373 TTCTTCCAACGCAAA AGAGGCGGCCGCC GCGA GGAGGCCGCCTCC TTCTCTTTTTACAGA TERM 772 1114398 - 1114371 - T 100 -18.4 -4.27316 | opp_overlap 1114370 1114365 1114371 1114373 TCTTCCAACGCAAAA GAGGCGGCCGCC GCGA GGAGGCCGCCTC CTTCTCTTTTTACAG TERM 773 1114371 - 1114398 + T 90 -18.4 -3.03925 | opp_overlap 1114371, overlap 1114370 1114365 1114373 TCTTCCAACGCAAAA GAGGCGGCCGCC GCGA GGAGGCCGCCTC CTTCTCTTTTTACAG TERM 774 1114373 - 1114396 + T 81 -15.2 -3.06384 | opp_overlap 1114371, overlap 1114371 1114370 1114365 TTCCAACGCAAAAGA GGCGGCCGCC GCGA GGAGGCCGCC TCCTTCTCTTTTTAC BRADO1047 1114977 - 1114429 - | RNA polymerase sigma factor BRADO1048 1115214 - 1114978 - | hypothetical protein TERM 775 1115318 - 1115336 + H 80 -5.2 -4.84642 | opp_overlap 1115318, overlap 1115313 1115330 AACCGCGCCACAAAA GTTCCACG CGT TGGGGAAC TTTTCTTCGTTTCAG BRADO1049 1115450 - 1116214 + | two-component response regulator TERM 776 1116249 - 1116272 + T 100 -16 -5.07652 | TGTGAGATTTGTCTT CGGCGCGCTC CTCG GAGTGCGCCG TTTTGTTTTCCCGGC BRADO1050 1116739 - 1116308 - | hypothetical protein TERM 777 1116879 - 1116837 - H 100 -23.5 -4.4767 | overlap 1116840 GCAGGGAGCACAAAA GATGCGGGGCACCGCCG GCATCACCA CGGCGGTGCCCCGCGTC GCCGGTCAATGGGGC TERM 778 1116876 - 1116840 - H 100 -23.8 -2.90028 | overlap 1116837 GGGAGCACAAAAGAT GCGGGGCACCGCCG GCATCACCA CGGCGGTGCCCCGC GTCGCCGGTCAATGG BRADO1051 1117073 - 1117534 + | putative signal peptide BRADO1052 1117998 - 1117555 - | putative signal peptide TERM 779 1118058 - 1118037 - R 100 -17.3 -3.85165 | TACCCGAAATTCAAA TCGGCGCCG AAAG CGGCGCCGA CACGTCATCATGCTT BRADO1053 1118503 - 1118093 - | hypothetical protein BRADO1054 1119662 - 1118544 - | putative permease TERM 780 1118791 - 1118765 - G 70 -13.1 -3.05268 | gap 1 TAATCACGGCGAATA TGAGCGGC-GCA GCCA TGCCGCCGCTCA GGGTCGGGAATGCAA BRADO1055 1119943 - 1120605 + | putative ErfK/YbiS/YcfS/YnhG precursor BRADO1056 1120621 - 1121286 + | putative signal peptide BRADO1057 1123393 - 1121300 - | putative methyl-accepting chemotaxis receptor/sensory transducer BRADO1058 1123587 - 1123742 + | hypothetical protein TERM 781 1123778 - 1123798 + T 100 -15.4 -4.30576 | opp_overlap 1123778, overlap 1123780 1123781 ATTCGCTCTAAAAAA GCCCCGGC GGTCG GCCGGGGC TTTTCGTCGTCAGGC TERM 782 1123798 - 1123778 - T 100 -15.4 -5.00884 | opp_overlap 1123778 1123780 1123781 ATTCGCTCTAAAAAA GCCCCGGC GGTCG GCCGGGGC TTTTCGTCGTCAGGC glcB 1125982 - 1123808 - | malate synthase G TERM 783 1126039 - 1126054 + r 72 -11.8 -3.34236 | opp_overlap 1126037 1126038 GGGCATGCTGAAACG GCCGCC TCCC GGCGGC TTGTGCAGTGCATTT TERM 784 1126880 - 1126869 - R 91 -3 -5.41143 | opp_overlap 1126869 GATTTCCGAAAAAAA GAAA GAAA TTTC TGTTGCCGGACGCGT TERM 785 1127364 - 1127336 - R 100 -23.1 -3.53811 | TGTAGGGCGGGCAAA GCCGCGCCCGCGC GCC GCGCGGGAGCGGC GTGCAAACCGGGGCT TERM 786 1127404 - 1127422 + r 74 -11.6 -3.53444 | CAGGACGGTGGGCAC GCGCCGCC TTC GGCGTCGC TTTGCCCAACCCTAC BRADO1060 1128201 - 1127467 - | hypothetical protein BRADO1062 1128696 - 1129553 + | putative cytochrome c peroxidase BRADO1063 1131695 - 1129785 - | CysN/CysC bifunctional enzyme, ATP-sulfurylase large subunit and adenylyl sulfate kinase TERM 787 1131515 - 1131541 + g 72 -11.4 -3.60971 | overlap 1131516 ATTCGAACGGCATGC CGCGGCGGGCCG AGA CGGCCTGCAGCA TTTCGAGCTTGCCGT TERM 788 1131516 - 1131540 + g 72 -14.9 -2.76261 | overlap 1131515 TTCGAACGGCATGCC GCGGCGGGCCG AGA CGGCCTGCAGC ATTTCGAGCTTGCCG cysD 1132534 - 1131719 - | sulfate adenylyltransferase subunit 2 TERM 789 1132662 - 1132643 - H 71 -5.8 -4.36914 | gap 1, opp_overlap 1132642 1132643 1132660, overlap 1132660 CTGCTTGGGAGAAAA TTCTATGGC GAA GCCA-AGAA ATAATTTTCTCTTTA TERM 790 1133944 - 1133990 + G 74 -15.1 -3.02144 | gap 2, opp_overlap 1133927 GGCGCCGGCGGTGCG CTCCGGCCTGC-TC-GCGGCGGG CCG CTCGCCGCAGACGCCGGTCGGCG TGTTCGCGCGCGTGA cysG 1132748 - 1134178 + | siroheme synthase BRADO1066 1134179 - 1134493 + | hypothetical protein BRADO1067 1134504 - 1136159 + | sulfite/ferredoxin-nitrite reductase TERM 791 1136232 - 1136250 + G 76 -8.8 -4.16842 | GGCGCAAGGCGCGAT CCTCGTCT CCG AGACGCGG TTTCTTGCCGGTCCC BRADO1068 1136146 - 1136664 + | hypothetical protein cysH 1136703 - 1137386 + | phosphoadenosine phosphosulfate reductase sbp 1137617 - 1138582 + | sulfate ABC transporter periplasmic substrate-binding protein cysT 1138627 - 1139460 + | sulfate/thiosulfate ABC transporter membrane protein cysW 1139470 - 1140372 + | sulfate/thiosulfate permease W cysA 1140362 - 1141399 + | sulfate/thiosulfate ABC transporter, ATP-binding component TERM 792 1141501 - 1141474 - f 100 -22.8 -3.28712 | overlap 1141456 TGTCGTCCCGGACAA GCCCGGCAACGC GCCA GCGTTGCCGGGC GCCGATCCGGGACCC BRADO1074 1141845 - 1142360 + | hypothetical protein BRADO1075 1142507 - 1143682 + | putative patatin-like phospholipase BRADO1076 1143687 - 1144478 + | D-beta-hydroxybutyrate dehydrogenase (BDH) (3-hydroxybutyrate dehydrogenase) (3-HBDH) BRADO1077 1144710 - 1144961 + | putative signal peptide BRADO1078 1145627 - 1144992 - | putative ErfK/YbiS/YcfS/YnhG precursor TERM 793 1145734 - 1145771 + r 82 -14.9 -3.37344 | gap 1, opp_overlap 1145727, overlap 1145737 ACTCAACACTTGCGT GATCGTCGCGCACGGCAA TCC TTGCCGGG-GCGACGCTC TTAGTTCCGTCAAGC TERM 794 1145737 - 1145768 + r 77 -15.2 -2.5507 | gap 1, opp_overlap 1145727, overlap 1145734 CAACACTTGCGTGAT CGTCGCGCACGGCAA TCC TTGCCGGG-GCGACG CTCTTAGTTCCGTCA BRADO1079 1147204 - 1145828 - | PST family polysaccharide export protein BRADO1080 1148145 - 1147306 - | putative signal peptide TERM 795 1147528 - 1147506 - G 70 -10.4 -3.67481 | overlap 1147507 CGACATACAAATGAA CGCCGCGCCC CTC GGGCGCCGCC ACGTCGACGATGACA TERM 796 1147911 - 1147863 - G 82 -15.5 -3.48593 | gap 2, opp_overlap 1147844 1147869, overlap 1147897 GAGCCGGCCACAGAA CCGTCACGGCTTCGACGTTCTCC GACTT GGAGAA-GTCGAA-CCGCGGCGG CACGCCGGAATCGCC TERM 797 1148889 - 1148867 - g 75 -12 -3.62354 | overlap 1148865 TGTCGAAAGCAAATA CGATCTGGCG CTG CGCAAGATCG GCATCGATCCGGGCA BRADO1081 1148277 - 1148933 + | hypothetical protein BRADO1082 1150114 - 1149227 - | alpha-ketoglutarate-dependent 2, 4-dichlorophenoxyacetate dioxygenase BRADO1083 1151061 - 1150252 - | putative 3-oxoacyl-[acyl-carrier-protein] reductase BRADO1084 1151328 - 1152422 + | putative glucose dehydrogenase precursor TERM 798 1153171 - 1153183 + G 78 -10.5 -4.07877 | opp_overlap 1153170 TACGCCGCAGGACAT GGCCG GTG CGGCC TTGTTTCTCGCCTCA TERM 799 1153218 - 1153250 + G 95 -10.6 -4.56607 | gap 1, opp_overlap 1153218, overlap 1153210 TGTCGTCCTACATCA TCGGCCAGACCATCG TTGT CGATGG-CGGGCTGA TTTTGTAGTTCGTCG BRADO1085 1152524 - 1153258 + | putative 3-oxoacyl-acyl carrier protein reductase BRADO1086 1153335 - 1153700 + | hypothetical protein TERM 800 1153763 - 1153734 - T 100 -17.9 -4.49556 | opp_overlap 1153734 1153735, overlap 1153711 1153735 TTTGGACCAAACAAA TGGCCCGCATTCG AGAG CGAATGCGGGCCG TTTCGTTGTCTCGCT TERM 801 1153734 - 1153763 + T 100 -20.1 -4.04576 | opp_overlap 1153711 1153734 1153735, overlap 1153735 TTTGGACCAAACAAA TGGCCCGCATTCG AGAG CGAATGCGGGCCG TTTCGTTGTCTCGCT TERM 802 1153762 - 1153735 - T 100 -21.4 -3.29252 | opp_overlap 1153734 1153735, overlap 1153711 1153734 TTGGACCAAACAAAT GGCCCGCATTCG AGAG CGAATGCGGGCC GTTTCGTTGTCTCGC TERM 803 1153735 - 1153762 + T 100 -21.4 -3.02023 | opp_overlap 1153711 1153735 1153734, overlap 1153734 TTGGACCAAACAAAT GGCCCGCATTCG AGAG CGAATGCGGGCC GTTTCGTTGTCTCGC BRADO1087 1155670 - 1153805 - | hypothetical protein TERM 804 1155493 - 1155449 - G 85 -17.8 -2.70932 | gap 1 GTCGCCGCCGAACCA GCCTCCGCCACCGCCGCCGCC GCGC GGCGCCGGTCGTGGC-GAGGC AAACGGGTTGAAGTT BRADO1088 1157203 - 1155776 - | putative membrane-bound lytic murein transglycosylase, putative signal peptide TERM 805 1156442 - 1156415 - G 72 -13.4 -3.14931 | gap 1 GGCAGTCGGCATGAA CTGGGTCGG-GCC GAA GGCGCCGGCCCAG GAGCCGCGCAACTGT TERM 806 1157399 - 1157409 + G 70 -2.4 -4.62069 | AGGCCCCATGAAGAT CCGC AAA GCCG TTTTTCCGGTCGCCG galU 1157391 - 1158272 + | glucose-1-phosphate uridylyltransferase BRADO1090 1159845 - 1158337 - | putative diguanylate cyclase (GGDEF) precursor BRADO1091 1159989 - 1160246 + | hypothetical protein BRADO1092 1160451 - 1162166 + | oligopeptide ABC transporter periplasmic substrate-binding protein TERM 807 1162357 - 1162386 + F 100 -10.7 -5.47399 | gap 1, overlap 1162360 CTGATCCAATTTTGT GCAGCTCCGCGAAG ATG CTTGGCGGGGC-GC TTTTTTTGGCATTCA TERM 808 1162477 - 1162487 + G 75 -6.8 -4.37092 | opp_overlap 1162465 1162466, overlap 1162470 1162469 AAAGCGGGGCGCCTG TCGC GGC GCGA TTTTGTGCAGCGGAT BRADO1093 1162423 - 1164216 + | oligopeptide ABC transporter periplasmic substrate-binding protein TERM 809 1164607 - 1164635 + GF 70 -12.3 -3.15503 | overlap 1164605 TGATCGTCGCGATCC CGGTCGGCGTGCT GGC GGCGCGCCGGCCC TATTCGATCTTCGAC appB 1164261 - 1165220 + | oligopeptide transport system permease TERM 810 1165279 - 1165248 - gf 76 -5.6 -4.56597 | opp_overlap 1165231, overlap 1165250 GCCGGCTTCGAAAAA GCGCCGCTTCTCGC CCGG GCGCGATGCGGTCC GACGCTTCCTGCGCC oppC 1165195 - 1166127 + | oligopeptide ABC transporter membrane protein oppD 1166124 - 1167125 + | oligopeptide ABC transporter ATP-binding protein oppF 1167095 - 1168123 + | oligopeptide ABC transporter ATP-binding protein BRADO1098 1170151 - 1168139 - | putative methyl-accepting chemotaxis receptor/sensory transducer fadD 1172197 - 1170335 - | feruloyl-CoA synthase TERM 811 1170749 - 1170724 - G 72 -13.3 -3.16564 | gap 1 GCGCCAGCGCAGCAA TGCCGGCGACGC GCA GCG-CGCCGACA TTCACCCAGGTGCCG TERM 812 1172222 - 1172203 - H 71 -10.7 -3.4252 | GGCTACCCATGAGAA GCCTCCG TCCCGT CGGAGGC TGCGCAAAAAAGAGG BRADO1101 1172497 - 1172976 + | MarR family transcriptional regulator BRADO1102 1176078 - 1173172 - | diguanylate cyclase/phosphodiesterase TERM 813 1174476 - 1174501 + g 73 -11.1 -3.65522 | GATTGTCGTGCACGC TGTCGTGGAGC AGCC GCTCCTCGGCA TTCTTGAACTCGGTC BRADO1103 1177242 - 1176220 - | putative NADPH quinone oxidoreductase BRADO1104 1177307 - 1177498 + | hypothetical protein TERM 814 1177678 - 1177699 + F 100 -11.5 -5.40072 | opp_overlap 1177680, overlap 1177680 CTGTTATCAACTTCA AAGCCGCCG GCAA CGGCGGCTC TTTTTTTGGCAGCAC TERM 815 1177680 - 1177697 + F 100 -14.1 -4.34482 | opp_overlap 1177680, overlap 1177678 GTTATCAACTTCAAA GCCGCCG GCAA CGGCGGC TCTTTTTTTGGCAGC TERM 816 1177697 - 1177680 - f 81 -14.1 -3.67976 | opp_overlap 1177680 1177678 GTTATCAACTTCAAA GCCGCCG GCAA CGGCGGC TCTTTTTTTGGCAGC BRADO1105 1178126 - 1178638 + | hypothetical protein TERM 817 1178703 - 1178722 + T 100 -16.4 -4.3467 | opp_overlap 1178703 CCGGACAAACAAAAA CGCCCCCG TTTC CGGGGGCG TTTTGCTGTGGGCAT TERM 818 1178722 - 1178703 - T 100 -16.4 -5.38054 | opp_overlap 1178703 CCGGACAAACAAAAA CGCCCCCG TTTC CGGGGGCG TTTTGCTGTGGGCAT BRADO1106 1178967 - 1178782 - | putative 50S ribosomal protein L31 BRADO1107 1179170 - 1181104 + | ABC transporter ATP-binding protein BRADO1108 1181247 - 1181447 + | putative signal peptide BRADO1109 1182097 - 1181648 - | putative acetyltransferase BRADO1110 1183244 - 1182216 - | hypothetical protein TERM 819 1183270 - 1183292 + r 85 -10.5 -4.38712 | opp_overlap 1183270 1183269 1183274 CTCAGAACTTCAAAC GCAAGCGCG AAGAG CGCGCTAGC TTTTCTCCGGCTGCC BRADO1111 1184277 - 1183288 - | putative biopolymer transport exbB protein; putative membrane protein BRADO1112 1184461 - 1185273 + | hypothetical protein BRADO1113 1185286 - 1186314 + | putative cyclopropane-fatty-acyl-phospholipid synthase TERM 820 1186486 - 1186502 + F 74 -5.8 -4.46212 | gap 1, overlap 1186486 1186469 CCCAGCCGCTGCATT GCGCCGC AGCA GCG-CGC TTTTATGGTGCGGCC TERM 821 1186793 - 1186749 - g 75 -12.9 -3.4072 | opp_overlap 1186777 1186778 1186785 CACCGTCGAGCAGAA GTCGCGCGCGAT-CGTCCGCG AGCTG CCCGGCCGTATCGCGC-CGAC CCGCGTCTCTGATGT TERM 822 1187520 - 1187574 + G 76 -15.4 -2.94099 | overlap 1187522 CATCGACAGCGACTC GGTCGCGGTGCCGCAGCAGGCGGTGC AGC GCAACGCCGCCGGCGGCTCCGAGGTC TATGTCATCCGCGAG TERM 823 1187522 - 1187572 + G 72 -14.4 -3.02471 | overlap 1187520 TCGACAGCGACTCGG TCGCGGTGCCGCAGCAGGCGGTGC AGC GCAACGCCGCCGGCGGCTCCGAGG TCTATGTCATCCGCG BRADO1114 1186657 - 1187790 + | AcrB/AcrD/AcrF family mulitdrug efflux protein TERM 824 1188242 - 1188263 + G 74 -10.1 -3.78775 | CGACCGACGGCAGCC TCGACGAGG TCGG CCTCGGCGA TTTCATGATCCGCAA BRADO1115 1187797 - 1190949 + | AcrB/AcrD/AcrF family mulitdrug efflux protein BRADO1116 1191272 - 1191736 + | hypothetical protein BRADO1117 1192781 - 1191963 - | inositol monophosphatase BRADO1118 1193996 - 1192902 - | putative Beta-lactamase BRADO1119 1194683 - 1194009 - | putative thiamine phosphate pyrophosphorylase (thiamin phosphate synthase/diphosphorylase) cbbA 1196714 - 1195647 - | fructose-1,6-bisphosphate aldolase BRADO1121 1197196 - 1196939 - | hypothetical protein pgk 1198442 - 1197243 - | phosphoglycerate kinase TERM 825 1197927 - 1197948 + g 73 -12.9 -3.28712 | TTCGGCCTGCATGGT GCGGCCGGC ATAG GCCGGCAGC TTATGGCCGAGGCCC cbbG 1199677 - 1198670 - | glyceraldehyde-3-phosphate dehydrogenase (GAPDH) recQ 1201697 - 1199823 - | ATP-dependent DNA helicase RecQ cbbT 1204004 - 1202019 - | transketolase TERM 826 1204218 - 1204230 + H 74 -6.2 -4.45083 | TGCCCGTAAACGCTT GCCG GACAG CGGC TTTTGTCGCTATCCC BRADO1127 1204276 - 1204611 + | hypothetical protein BRADO1128 1204608 - 1204991 + | hypothetical protein BRADO1129 1205660 - 1205229 - | NTF2-like superfamily protein TERM 827 1205805 - 1205769 - H 81 -16.5 -2.78596 | GAGGCCGGGACGACA GCGGAGGGTGTGGCGCG CTG CTCGCCATACCCTCCGA GTCGTCCCGGCGAAC TERM 828 1206838 - 1206858 + G 83 -15.4 -3.53811 | opp_overlap 1206810 CCGTCAGACGCGCAA CGGCCGCG GCTGG CGCGGCCG TTTCCGAACGATCCG BRADO1130 1206061 - 1207335 + | putative penicillin binding protein TERM 829 1207472 - 1207427 - g 70 -10.6 -3.62096 | gap 3 CCTTATGATCTGAAA TGCTACGC-GCGTGACGCCAGGA CGG TCCTGGCGCC-CGCGGAGTA-CA AGGCGCTGCACCCGA TERM 830 1207500 - 1207474 - g 70 -11.5 -3.40403 | gap 1, opp_overlap 1207489 GCCCGCGGAGTACAA GGCGCTGCACCC GATC GGG-GCGGCGCC GGTCATCACCGACGG BRADO1131 1207340 - 1207981 + | putative glutathione S-transferase BRADO1132 1209071 - 1208016 - | putative TRAP-type uncharacterized transport system protein, periplasmic component TERM 831 1209017 - 1208994 - G 76 -15.2 -3.2048 | opp_overlap 1209005 GGCAAAGCGCACGAA GCCGCCGTCC GGCA GGCCGGCGGC GAGACCGACGGTCCA BRADO1133 1209892 - 1209437 - | YchN-like TERM 832 1210029 - 1210015 - H 71 -12.8 -3.02144 | opp_overlap 1210025 CTATGCGCTTGAAGA CGCGGC CCT GCCGCG CGAGCGCCGCGATGG TERM 833 1210478 - 1210424 - H 80 -14.3 -3.16683 | overlap 1210426 1210429 AGCTCATGTCAGCAA CAGCACGACGGGCAATCCGTGCATG TCGCT CATGCGCAAAGTGCCCGTCGCGTTA CGATGTCGCAGGCTG TERM 834 1210476 - 1210426 - H 80 -14.7 -3.14602 | overlap 1210424 1210429 CTCATGTCAGCAACA GCACGACGGGCAATCCGTGCATG TCGCT CATGCGCAAAGTGCCCGTCGCGT TACGATGTCGCAGGC TERM 835 1210473 - 1210429 - H 84 -17.2 -2.77701 | overlap 1210426 1210424 ATGTCAGCAACAGCA CGACGGGCAATCCGTGCATG TCGCT CATGCGCAAAGTGCCCGTCG CGTTACGATGTCGCA TERM 836 1210949 - 1210928 - H 71 -8.7 -3.90425 | gap 1 GATCGAAATCAACAA CTCG-GACGC TGA GCGCCGCGAG AGTGTGAAGCCATGC BRADO1138 1211480 - 1212061 + | antifreeze protein, type I: 5-formyltetrahydrofolate cyclo-ligase TERM 837 1212275 - 1212291 + G 73 -13.7 -3.13403 | overlap 1212273 CAATCATTCCTGGGA CCAGCGC GAG GCGCTGG TGTTCATCGAACGGG BRADO1139 1212063 - 1212887 + | metallo-phosphoesterase BRADO1140 1213134 - 1212904 - | hypothetical protein BRADO1141 1214634 - 1213204 - | putative methyl-accepting chemotaxis protein TERM 838 1214510 - 1214561 + g 100 -20.8 -2.80816 | overlap 1214554 GCCACTTCCTGGACG TTGCCGGCGACGTCGGCGAGCTCG ACGC CGAGCCCGCCGATGCGGTCGGCGA TCTCGTCGATCAGCC BRADO1142 1216380 - 1214680 - | methyl-accepting chemotaxis sensory transducer precursor TERM 839 1215771 - 1215799 + g 71 -12.3 -3.29144 | CCTGGGCAATGCGGT GGACGGCGTCGGC CGA GCCGGAGGCGTCC TTCTGCAGCGCCTCG TERM 840 1215917 - 1215892 - G 74 -12.5 -3.62096 | gap 1, overlap 1215893 CGCGACGACTGCAAA GCCGCGGCCGGC CTC GCCGGC-GCGGG CGGCCTCGATCGTGG TERM 841 1215916 - 1215893 - G 75 -16 -2.77043 | gap 1, overlap 1215892 GCGACGACTGCAAAG CCGCGGCCGGC CTC GCCGGC-GCGG GCGGCCTCGATCGTG TERM 842 1216878 - 1216866 - g 79 -4.7 -4.72272 | overlap 1216848 1216868 GCGCGCGATCAAAAA GGCGC TCG GCGGC GAGGGTGAGAACTAC BRADO1143 1216651 - 1217397 + | hypothetical protein ruvC 1217482 - 1218009 + | Holliday junction resolvase ruvA 1218006 - 1218623 + | Holliday junction DNA helicase motor protein BRADO1146 1218679 - 1219095 + | hypothetical protein TERM 843 1219754 - 1219721 - g 75 -15.3 -2.71364 | gap 1, overlap 1219723 CGATGGCGCCAACGA GATCGCGCGCCGCGCC CGC GGCACGCCGCGC-ATC GCCGGCCGCCTGCTG ruvB 1219092 - 1220138 + | Holliday junction DNA helicase B BRADO1148 1220202 - 1221143 + | putative metallophosphoesterase ykuE ybgC 1221203 - 1221652 + | 4-hydroxybenzoyl-CoA thioesterase BRADO1150 1226486 - 1221657 - | putative DNA helicase related protein TERM 844 1222582 - 1222570 - G 72 -6.9 -4.26202 | opp_overlap 1222575, overlap 1222571 AGATCGACGAAGAAA CCGGC GGT GCCGA TCTGCATCTTTACGT TERM 845 1223501 - 1223445 - G 70 -10.8 -3.61715 | GAGCTTGGCGAAGAA GCGCGTCGGCGGCAGCT-GCCGCTCGTC GCC GACCA-CGACCATCTGCCGGCAGCGCGC GACCGCGCCGAGCGC BRADO1151 1227146 - 1226496 - | putative glutathione S-transferase TERM 846 1227275 - 1227245 - g 100 -5.2 -5.63504 | overlap 1227249 1227250 AATGGTACAAAAAAA GAAGGGGCCGCCGC ATG GCGACCTGCCCTCC GAAAAGCCCGCGGTG TERM 847 1227325 - 1227281 - g 100 -21.4 -4.07568 | gap 2 CCTGCCCTCCGAAAA GCCCGCGGTGCCGACCGAGCCG AAG CGGCGCGGGCGGC-C-GCGGGC CTATGAGCCGGACCT BRADO1152 1227231 - 1227902 + | TetR family transcriptional regulator BRADO1153 1228950 - 1227907 - | 2-hydroxyacid dehydrogenase TERM 848 1228154 - 1228174 + g 71 -12.5 -3.23216 | opp_overlap 1228142 ATATCCGCCTCGTCC TGCAGGCCG CCG CGGCCGGCA TTGATCATGATGGGC BRADO1154 1228963 - 1229310 + | hypothetical protein TERM 849 1229354 - 1229334 - f 71 -13.3 -3.05384 | TTCGTGCCGATGGAA CCCGCGAAA ATT CTTCGCGGG CCTGTCGGCCCCGGG BRADO1155 1229410 - 1229778 + | hypothetical protein BRADO1156 1229775 - 1231046 + | RNA polymerase ECF-type sigma factor BRADO1157 1231185 - 1231553 + | hypothetical protein TERM 850 1232024 - 1231976 - g 76 -14.5 -3.21099 | gap 1 TCCCTGGATGATCAA CGCGCCG-GCCGACAGCTACGC GGCGTA ACGCCGCTAGCGGCACGGCGCG TACATCGCCTTCAGC BRADO1158 1231584 - 1232003 + | glyoxalase family protein BRADO1159 1232455 - 1232009 - | putative signal peptide TERM 851 1232085 - 1232062 - G 72 -13.1 -3.17051 | overlap 1232060 CGCGCAGCACCAAGA GCCGCGACG TCAATC CGCCGCGGC GCTCGATCCAGCCGC BRADO1160 1233275 - 1232475 - | putative 3-oxoacyl-[acyl-carrier-protein] reductase TERM 852 1233196 - 1233186 - G 81 -8.2 -4.56597 | GCCTTCGTGCAAAAA CCGC TTG GCGG TCGCGAGCCCGATGC TERM 853 1234074 - 1234038 - H 100 -4.2 -5.52384 | gap 1 TCTTCACGAAAAAAA GCTGTCCGCGCAGCCGG CCTG CGGGTTGCGCTGGC-GC CTATAAGCGGGCATT TERM 854 1234092 - 1234118 + H 85 -15.8 -3.52204 | opp_overlap 1234082 1234081, overlap 1234089 ATAAGCGGGCATTCC GCGCCGGATGCG ATC CTCGTCCGGCGC TTGATTTGCCCGTCG TERM 855 1235375 - 1235341 - g 70 -11.5 -3.36273 | gap 1, opp_overlap 1235339, overlap 1235323 GCTGCTCAAGATGAA CGGC-AGCACCACC GAGCCGAA GGCGGTGCTCGCCG AATATTCCGACGCGG BRADO1161 1234493 - 1235563 + | hypothetical protein TERM 856 1235833 - 1235849 + T 100 -9.3 -5.75342 | GCTGAGAGCGATCAC GCCGTCG TGG CGCCGGC TTTTTTTTCGGCAAC BRADO1162 1236407 - 1235829 - | MarR family transcriptional regulator BRADO1163 1236464 - 1237012 + | putative pyrimidine reductase TERM 857 1237595 - 1237618 + G 81 -14.6 -3.58726 | AAGGTGGAGCCGCTC GGCGGCGATC TGCG GATCGTCGCC TTCTATCTCGACCGG BRADO1164 1237040 - 1237714 + | putative glutathione S-transferase BRADO1165 1237828 - 1238241 + | hypothetical protein BRADO1166 1238064 - 1238690 + | hypothetical protein BRADO1167 1238722 - 1239090 + | hypothetical protein TERM 858 1239253 - 1239269 + G 72 -15.1 -2.78384 | opp_overlap 1239235 1239248 GGCGCAAGGAGCAGC GCCGCGC CGA GCGCGGC TATCATCACGGCAAC TERM 859 1239353 - 1239403 + G 83 -15.3 -3.55444 | gap 1, opp_overlap 1239332 CGCCGGCTTCACCTT TGCCGATGCGGC-CCGCATGGCGG GCGT CAGCCCGGCGGCGCCGTACCGGCA TTTCCGCGATCGCGA BRADO1168 1239231 - 1239956 + | TetR family transcriptional regulator BRADO1169 1240153 - 1240575 + | hypothetical protein TERM 860 1240632 - 1240675 + F 100 -21.7 -3.57144 | opp_overlap 1240639 CCCCAGCCCTGACGG CACGAGACGCCCGCCTGCG AATCCC CGCCGGCGGGCGTCTTGCG TTTCGGGATACCGCC TERM 861 1240668 - 1240639 - f 86 -18.5 -2.79796 | opp_overlap 1240632 CCTGACGGCACGAGA CGCCCGCCTGCGA ATCC CCGCCGGCGGGCG TCTTGCGTTTCGGGA tolQ 1241030 - 1241734 + | TolQ protein BRADO1171 1241774 - 1242253 + | putative TolR protein BRADO1172 1242250 - 1243251 + | putative TonB protein tolB 1243463 - 1244593 + | protein tolB precursor TERM 862 1245935 - 1245963 + G 72 -13.2 -3.16492 | gap 1, opp_overlap 1245931, overlap 1245933 CCTGCTCAAGATCCC GCAGCGCC-ACGG CGAG CTGTCGGCGCTGC TGTTCGTCGATCTCG TERM 863 1246080 - 1246106 + G 73 -13.1 -3.27923 | gap 1 CTGCGCCCGGAGGAT TTCGTCGCCCGC TTCG GCGG-CGACGAA TTCGTCGTGTTCCAG BRADO1174 1244814 - 1247183 + | putative diguanylate cyclase (GGDEF)/phosphodiesterase (EAL) BRADO1175 1247514 - 1248194 + | hypothetical protein TERM 864 1248288 - 1248271 - Tf 100 -11.3 -4.7078 | GGAATCAGCGAAAAA GCGCCTT GCTC AAGGCGC ACGACCGCTTGCCTT BRADO1177 1249023 - 1248874 - | hypothetical protein omp16 1248518 - 1248967 + | Outer membrane lipoprotein omp16 precursor (peptidoglycan-associated lipoprotein) TERM 865 1248988 - 1249024 + gF 100 -31.1 -5.1167 | opp_overlap 1248979 1248994 AACAAACTGATTGCT GATGAAGCCGGCGTCGG AGA CCGACGCCGGCTTCATC TTTTTGTCTTCGCTT TERM 866 1249018 - 1248994 - Gf 100 -22.9 -3.14931 | opp_overlap 1248988, overlap 1248979 CTGATTGCTGATGAA GCCGGCGTCGG AGA CCGACGCCGGC TTCATCTTTTTGTCT BRADO1178 1249142 - 1250191 + | hypothetical protein tilS 1250266 - 1251369 + | tRNA(Ile)-lysidine synthase TERM 867 1251412 - 1251428 + F 100 -6.5 -5.40072 | overlap 1251404 ACCACCTGCGTCGGC GGCGC TTTTCCC GCGCC TTTTTTTGAGCGGGA TERM 868 1253454 - 1253407 - g 70 -10.4 -3.68222 | gap 1 GCTCAAGGGCAAGAA GCCGAACCGCGAATCGGCGATCG AGC CG-TCGACGCCGCGCGCCTCGGC CGTGCCGCCGGCCGG ftsH 1251554 - 1253527 + | cell division protein FtsH; ATP-dependent zinc-metallo protease TERM 869 1253586 - 1253616 + G 77 -14 -3.48395 | opp_overlap 1253591, overlap 1253592 ATCAAGAGATTGAGA CGACAGGCCCGGTT CGC AGCCGGGCTTTTCG TTGTCTGCAACCCAT TERM 870 1253592 - 1253610 + G 100 -12.4 -4.53034 | opp_overlap 1253591, overlap 1253586 AGATTGAGACGACAG GCCCGGTT CGC AGCCGGGC TTTTCGTTGTCTGCA TERM 871 1253689 - 1253711 + G 74 -2.6 -4.72846 | gap 1, overlap 1253686 1253690 TGACGATTTTGGGTG C-GGCGCGC TCTCCT GCGGGCCTG TTTTTCAGTGTGTCC TERM 872 1253732 - 1253775 + G 74 -8.1 -4.18018 | gap 2, overlap 1253729 CAGTGTGTCCTTCGT CGGCCTG-GCCGC-GTTTGGC GGTC GCGAGGCAGCGGCGCAGGGCG TTTTCGATGCGGCCG TERM 873 1255345 - 1255372 + G 73 -13.4 -3.34043 | opp_overlap 1255338 TGAGGACAGCGGCCG GCGAGGCCTCAC AATG GTGCGGCTTCGC TTATGGCCTGGTCGC BRADO1181 1253580 - 1256189 + | hypothetical protein TERM 874 1256749 - 1256764 + G 79 -11.8 -3.78934 | CGGTCTGGTGCTCGC CGCCGG CTTC CCGGCG TTGTTCTCGAACACG BRADO1182 1256288 - 1257526 + | hypothetical protein TERM 875 1257637 - 1257625 - f 76 -5.5 -4.58395 | opp_overlap 1257636, overlap 1257632 GTGATCCTCCAAAAA CACTG AAC CAGCG TTCGCCGGGCGTTTC BRADO1183 1257684 - 1258358 + | TetR family transcriptional regulator TERM 876 1258368 - 1258342 - f 70 -7.2 -4.07568 | gap 1 TGTTGCCGGTGAAAA GCCTGGTCGGC GCCTGA GCCGGCC-GGC GCGGTCTCGCGCTTA TERM 877 1259135 - 1259172 + G 73 -9.1 -4.00066 | gap 1 CGTCACGGCCGGGCC GTGGGC-GCTGAAGATGC TGC GCGACTTCGGCAGTCCGC TTTATCCGTTCTACA BRADO1184 1258506 - 1260086 + | hypothetical protein pyk 1261528 - 1260092 - | pyruvate kinase BRADO1186 1262118 - 1261525 - | putative signal peptide BRADO1187 1262320 - 1262616 + | hypothetical protein BRADO1188 1262862 - 1263137 + | hypothetical protein BRADO1189 1264773 - 1263223 - | hypothetical protein TERM 878 1265135 - 1265104 - R 93 -16.6 -3.75153 | opp_overlap 1265109, overlap 1265064 1265105 1265109 TGTGGTTAACCTAAA GCAAAGGCCCCGCC GGAT GGCGAGGCCTTTGA TCTCACATCGGGATT TERM 879 1265134 - 1265105 - R 93 -20.1 -2.84878 | opp_overlap 1265109, overlap 1265064 1265104 1265109 GTGGTTAACCTAAAG CAAAGGCCCCGCC GGAT GGCGAGGCCTTTG ATCTCACATCGGGAT TERM 880 1265130 - 1265109 - R 100 -15.1 -4.10672 | opp_overlap 1265109, overlap 1265064 1265105 1265104 TTAACCTAAAGCAAA GGCCCCGCC GGAT GGCGAGGCC TTTGATCTCACATCG TERM 881 1265109 - 1265130 + r 83 -12.9 -3.83998 | opp_overlap 1265064 1265109 1265105 1265104 TTAACCTAAAGCAAA GGCCCCGCC GGAT GGCGAGGCC TTTGATCTCACATCG BRADO1190 1267248 - 1265173 - | putative signal peptide TERM 882 1266304 - 1266322 + g 78 -13.8 -3.61398 | overlap 1266321 CGGGTCGGACATCTG CGCCTCGG CCT CCGGGGCG TTCTTGCCGCGGGCA TERM 883 1266954 - 1266992 + g 70 -13.1 -3.02511 | gap 1 GCGCCGGAGTCGTCG CTGTGGCGGGAGCCGCTG CCGG CGGCGGCGCC-GTCACGG TCTTGGCGGGATCGG TERM 884 1267517 - 1267531 + r 91 -5.6 -5.25893 | GGCAAATCGATCTTG CGCTTG TGC CACGCG TTTTTTCCTCTGTCT BRADO1191 1269114 - 1267618 - | putative response regulator in two-component regulatory system, sigma 54-dependent. TERM 885 1268158 - 1268113 - G 83 -12.6 -4.07568 | gap 1, opp_overlap 1268126, overlap 1268090 TTCCTCGGCTGAAAA GCG-CGCCAGGAAATGCCGCA GCAGA TGCGGAATGTCCTCGCGGCGC GCGCGCAAGGGAGGG TERM 886 1270466 - 1270491 + G 71 -12.6 -3.28712 | gap 1, opp_overlap 1270480 1270481 GGATCGATGCGCCGG TGCGTCCCGGC AAAGC GCCGGG-CGCA TTCTCGCACCCGACC BRADO1192 1269235 - 1271202 + | putative oligoendopeptidase F BRADO1193 1271311 - 1271535 + | AbrB family transcriptional regulator BRADO1194 1271631 - 1271918 + | putative death on curing protein (fragment) BRADO1195 1272024 - 1272176 + | hypothetical protein pntA2 1272319 - 1273446 + | nicotinamide nucleotide transhydrogenase, subunit alpha1 pntA2 1273469 - 1273786 + | nicotinamide nucleotide transhydrogenase, subunit alpha2 pntB 1273845 - 1275242 + | pyridine nucleotide transhydrogenase (proton pump), beta subunit TERM 887 1275363 - 1275394 + G 83 -12.3 -4.08216 | gap 1 CTGTTTCCGATCCCG CCGGTCGGCCGC ACCGCGCCC GCGGCCG-CCGG TTTTCAGCAAGCTGA BRADO1199 1275249 - 1276061 + | hypothetical protein TERM 888 1276784 - 1276770 - g 72 -7 -4.25104 | overlap 1276771 CTTTCGTCAGGAAAA GCCGGC GCT GCGGGC ATCCCGCACGACTGA BRADO1200 1276159 - 1277496 + | Na+ antiporter TERM 889 1278213 - 1278228 + G 72 -8.2 -4.07568 | overlap 1278214 ACCGGGATTACTTCG TCGGCG AATC CGCCGG TTTTGCCGACGACGA TERM 890 1278448 - 1278423 - g 81 -14.7 -3.53012 | gap 1 TCCTGCTTCCCGAAA GCGTCGCCGCGA TCT CCGCGGCG-CGC GCCAACGACCTGCAG BRADO1201 1277588 - 1278712 + | putative ionic transporter y4hA BRADO1202 1278792 - 1279013 + | hypothetical protein BRADO1203 1279250 - 1280149 + | hypothetical protein TERM 891 1280177 - 1280199 + T 100 -12.7 -5.64274 | gap 1, opp_overlap 1280177 ATCACAGCAGCAAAA GCGGCGGCCC TCAA GGGC-GCCGC TTTTTTTCTCGCTCA TERM 892 1280199 - 1280177 - T 95 -12.7 -4.33675 | gap 1, opp_overlap 1280177 ATCACAGCAGCAAAA GCGGCGGCCC TCAA GGGC-GCCGC TTTTTTTCTCGCTCA TERM 893 1280328 - 1280308 - T 100 -15.4 -4.70879 | GCCAAACGCCAAAAA GCGCGGGC TGATG GCCCGCGC CTTCAAACGTCTCCA rpsU 1280662 - 1280360 - | 30S ribosomal protein S21 purK 1281939 - 1280830 - | phosphoribosylaminoimidazole carboxylase ATPase subunit purE 1282424 - 1281936 - | phosphoribosylaminoimidazole carboxylase catalytic subunit (AIR carboxylase) (AIRC) BRADO1207 1282749 - 1283243 + | putative diguanylate cyclase (GGDEF) BRADO1208 1283583 - 1283332 - | hypothetical protein BRADO1209 1283880 - 1283659 - | hypothetical protein TERM 894 1284153 - 1284109 - H 79 -9.4 -4.16842 | overlap 1284110 TGCAGCCGCAACAAA TCCGGA-GCGGGCGATTGATGC AAA GCGTCAATCGCC-GCGTCGAGA TCGCGGTGCTCCTGC BRADO1210 1284126 - 1284227 + | hypothetical protein BRADO1212 1285966 - 1284863 - | NAD binding site:FAD dependent oxidoreductase TERM 895 1287030 - 1286983 - g 75 -15.5 -2.78384 | gap 1 TGTTCGGCGACGAGA CGGCCGCCGATATCGCGGCCGC CGACC GCG-CCGCGATGCTGGCGCCCG GCACGACCCATCGCA BRADO1213 1286175 - 1288886 + | diguanylate cyclase/phosphodiesterase TERM 896 1288910 - 1288927 + F 71 -8.3 -3.87075 | opp_overlap 1288921, overlap 1288911 1288916 1288921 GTCCGGCCAGCGGCT GCCGCGC AACA GCGCGGA TTTATCCGCGGTCCT TERM 897 1290091 - 1290119 + G 85 -5.1 -5.0538 | overlap 1290087 CCGTCCGACGTCGCG CCGAGCAGGCCGT TTC AAGGCTTGCCAGG TTTTTTCCGATGACG TERM 898 1290440 - 1290467 + G 86 -17.8 -3.14132 | gap 1, opp_overlap 1290422 CGGCCTCAGCCTCTC GGCAGCCGAGCGC GAT GCGCT-GGCTGCC TTCATGGCGCAGGCG glpD 1289019 - 1290569 + | glycerol-3-phosphate dehydrogenase TERM 899 1291219 - 1291200 - g 79 -11.4 -3.78934 | overlap 1291214 CGCGCTCGACAAGAA GCTGCGCG AGAG CACGCAGC TCGAGCTGATGGAGC potG 1290619 - 1291791 + | putrescine ABC transporter ATP-binding protein potH 1291770 - 1292702 + | putrescine ABC transporter membrane protein potI 1293072 - 1293884 + | putrescine ABC transporter membrane protein BRADO1218 1295163 - 1294174 - | putative lipoprotein signal peptide BRADO1219 1296019 - 1295168 - | ABC transporter permease BRADO1220 1296891 - 1296016 - | ABC transporter permease TERM 900 1296939 - 1296969 + r 73 -8.3 -4.1021 | gap 2, opp_overlap 1296942, overlap 1296932 1296939 1296940 CGTCCCGTCGATAAC GA--ACCGGCCGCAG CTT CTGCGGCCGGCAGTC TTTGTCGTTGTCAGA TERM 901 1296939 - 1296967 + r 70 -10.1 -3.64357 | opp_overlap 1296942, overlap 1296939 1296932 1296940 CGTCCCGTCGATAAC GAACCGGCCGCAG CTT CTGCGGCCGGCAG TCTTTGTCGTTGTCA TERM 902 1296940 - 1296966 + r 72 -13.6 -2.77891 | opp_overlap 1296942, overlap 1296939 1296939 1296932 GTCCCGTCGATAACG AACCGGCCGCAG CTT CTGCGGCCGGCA GTCTTTGTCGTTGTC TERM 903 1296964 - 1296942 - R 100 -20.6 -3.44146 | opp_overlap 1296940 1296939 1296939 1296932 CCCGTCGATAACGAA CCGGCCGCAG CTT CTGCGGCCGG CAGTCTTTGTCGTTG BRADO1221 1298446 - 1297016 - | ABC transporter substrate-binding protein BRADO1222 1300499 - 1298538 - | asmA protein, assembly of outer membrane proteins TERM 904 1298815 - 1298784 - G 83 -13.8 -3.76839 | gap 1, overlap 1298785 GAAGGGCAATTCAAA GCC-GTTGCCGCCAG AGC CTGACGACAACAGGC TGGCGACGCCCTTGA TERM 905 1298813 - 1298785 - G 71 -13.9 -2.85621 | overlap 1298784 AAGGGCAATTCAAAG CCGTTGCCGCCAG AGC CTGACGACAACAG GCTGGCGACGCCCTT TERM 906 1299518 - 1299552 + g 75 -11.5 -3.65522 | gap 2 TGAAGTCGAGCGCAT CGGCCGCCAGCGTCGCT TGC AGCGA--CTGCCGGCCG TTATTGGCGTAGGTC TERM 907 1300853 - 1300826 - g 85 -13.4 -4.13945 | overlap 1300851 ATCCGGACGCCAAAA CCGCCCTTGCGG GCCT CCTCAAGGACGG CATGACCATCATGTC TERM 908 1301133 - 1301148 + G 72 -11.8 -3.61398 | CATCCGCGCCGGCGG CGCCGG CATT CCGGCG TTCTTCACCAAGACC atoD 1300798 - 1301526 + | acetyl-CoA:acetoacetyl-CoA transferase, alpha subunit atoA 1301526 - 1302176 + | acetyl-CoA:acetoacetyl-CoA transferase, beta subunit BRADO1225 1303899 - 1302181 - | hypothetical protein BRADO1226 1304949 - 1304068 - | putative nitrate reductase, nirV-like; putative signal peptide. nirK 1306095 - 1305001 - | copper-containing nitrite reductase (NO-forming) nirK TERM 909 1306390 - 1306363 - R 72 -2.6 -4.73388 | gap 1 AACCCGGATTAAAAA TGCGCGCG-CAGC AAG GCTGTCGCTGACA GTTGGGCCGGCTCTC BRADO1228 1306649 - 1306440 - | hypothetical protein TERM 910 1306725 - 1306740 + H 72 -2.4 -4.72272 | opp_overlap 1306694, overlap 1306726 ACGAAGCGCAATGTC GCTGGC GAAA GCCGGG TTTTTACTGGCAGGG hemN 1306803 - 1308227 + | coproporphyrinogen III oxidase BRADO1230 1308300 - 1308503 + | hypothetical protein BRADO1231 1309220 - 1308504 - | CRP/FNR family transcriptional regulator BRADO1232 1309378 - 1310592 + | putative membrane protein, NnrS-like. BRADO1233 1314032 - 1310577 - | two-component hybrid sensor and regulator BRADO1234 1314362 - 1314742 + | hypothetical protein BRADO1235 1314963 - 1315397 + | hypothetical protein TERM 911 1316359 - 1316320 - T 73 -11.4 -3.55563 | overlap 1316321 ACGGGATGGGTCAAA TTCCAAGGCTTCGACCTC TGCC GAGATCGATGCCATGGAC GAAGGCCAGATCCTA TERM 912 1316358 - 1316321 - T 75 -14.9 -2.73124 | overlap 1316320 CGGGATGGGTCAAAT TCCAAGGCTTCGACCTC TGCC GAGATCGATGCCATGGA CGAAGGCCAGATCCT BRADO1239 1319326 - 1316372 - | putative conjugal transfer protein; TraA TERM 913 1319248 - 1319205 - G 79 -8 -4.56597 | opp_overlap 1319236 CGCTTCGCGGAAAAA TCCTGCTCACGGCCGAGC CGCTCGTC GCGCAGCCGCGAGCCCGA GCGGTAGGCCGCCGA TERM 914 1319758 - 1319747 - H 74 -2.2 -4.94992 | CGAAATGCACAAAAA GCTG ACCG CAAC ACGTACGGCGCTCCT BRADO1240 1319826 - 1320062 + | conjugal transfer protein traD BRADO1241 1321120 - 1321869 + | hypothetical protein BRADO1242 1321866 - 1324337 + | hypothetical protein BRADO1243 1324350 - 1326206 + | hypothetical protein BRADO1244 1328022 - 1327687 - | hypothetical protein TERM 915 1327937 - 1327911 - G 90 -18.1 -3.54459 | CGAAGTTGTGCGAAA TCGCCACCTCC CTCAC GGAGGTGGCGA CCGCGCTCCACAATG BRADO1245 1328453 - 1328019 - | hypothetical protein BRADO1246 1328928 - 1328395 - | hypothetical protein TERM 916 1330615 - 1330631 + GH 79 -13.7 -3.53012 | GCGCGCCCTGATCAT CGCCGCT GCG AGCGGCG TTTCAGACGGGGCCC BRADO1247 1328900 - 1330837 + | hypothetical protein TERM 917 1330865 - 1330831 - fH 73 -11.5 -3.61103 | gap 2 GAAGGCGACGGCAAA TG-GCTGA-CGCGGCGG TCG CCGCCGCGCTCAGGTCA ACCGCGAAGTTGGTC BRADO1248 1331037 - 1332320 + | putative ATP-dependent DNA helicase BRADO1249 1332512 - 1332949 + | hypothetical protein TERM 918 1333354 - 1333365 + T 100 -5.8 -5.47218 | overlap 1333337 ACCGGCGGCTTAACC GCGA TCGT TCGC TTTTTTTCGCTGCAA TERM 919 1333552 - 1333574 + T 78 -10.6 -4.07885 | overlap 1333542 CCGCCGGTTCGTCAG TGATGGAGGA CCT TCCTCCAGCA TTTTACCGCACCCTC BRADO1250 1335935 - 1333740 - | hypothetical protein BRADO1251 1337186 - 1335945 - | hypothetical protein BRADO1252 1338926 - 1337196 - | TPR repeat-containing protein TERM 920 1338221 - 1338183 - G 73 -13.8 -3.08679 | opp_overlap 1338181 GCCGGCGACGCAATA GTCGACGGCGAGACGCTC TCG GATCGTCGCAACGTCGAC CATTTGAACATTGAT TERM 921 1338886 - 1338910 + g 79 -2.7 -5.00616 | overlap 1338887 1338888 ACTCTAGCACTATGG TTGTGCCGCTC AAG GAGCTTCACGG TTTTTTCACACGCCA BRADO1253 1338956 - 1339195 + | hypothetical protein BRADO1254 1339596 - 1340327 + | hypothetical protein BRADO1255 1340346 - 1341878 + | hypothetical protein TERM 922 1342421 - 1342450 + G 75 -4.9 -4.67038 | gap 1, overlap 1342422 GAACTACGTTGAGCC CGCGGCGATGCTGC CGG GCAGCGTCGA-GCA TTTTGGTTTTCGCGA BRADO1256 1341882 - 1343447 + | peroxidase TERM 923 1345481 - 1345499 + G 79 -6.7 -4.62471 | gap 1, overlap 1345481 AGCCGAAGGCAGGGA CC-GTGCC GAGT GGCACCGG TTTTTCGGCCTTCGC BRADO1257 1343506 - 1345647 + | putative chloride peroxidase BRADO1258 1347104 - 1345830 - | putative phage-like integrase TERM 924 1347420 - 1347451 + r 85 -14.4 -3.64703 | gap 1 TTCCGACCCGCCGGT CACGGCGTTCG-CCC GAG GGGCCGCGCGCCGTG TTTGCATCAGACCAC BRADO1259 1349137 - 1347458 - | methyl-accepting chemotaxis receptor/sensory transducer BRADO1260 1350207 - 1349398 - | LuxR family transcriptional regulator TERM 925 1352122 - 1352141 + G 77 -12.8 -3.71848 | opp_overlap 1352093, overlap 1352123 TGGTCGCCGCGCAGC TCGCGGCG CTGT CGCCGCGG TTCTTCGTCGACGAG TERM 926 1352123 - 1352140 + G 71 -14.1 -2.82895 | opp_overlap 1352093, overlap 1352122 GGTCGCCGCGCAGCT CGCGGCG CTGT CGCCGCG GTTCTTCGTCGACGA BRADO1262 1351005 - 1352867 + | bacteriophytochrome protein BRADO1263 1352878 - 1353189 + | anti-sigma-factor antagonist family protein BRADO1264 1353496 - 1354143 + | putative bacteriophytochrome heme oxygenase, BphO-like BRADO1265 1354140 - 1354916 + | putative phycocyanobilin:ferredoxin oxidoreductase, PcyA-like hemA 1354935 - 1356278 + | 5-aminolevulinate synthase TERM 927 1356616 - 1356603 - g 74 -8.1 -4.2349 | GGTGCAGATCGAAAA GCTCG AAGG CGAGC ATGCCGGCGTGGTCA gvpN 1356538 - 1357557 + | gas vesicle synthesis protein N BRADO1268 1357554 - 1357829 + | hypothetical protein BRADO1269 1357834 - 1358079 + | hypothetical protein gvpS 1358093 - 1358392 + | gas vesicle synthesis protein GvpS (GvpA-related) BRADO1271 1358420 - 1358947 + | putative gas vesicle synthesis protein, GvpH-like TERM 928 1359643 - 1359665 + G 71 -9 -3.86202 | TGGCCTGCCTGGTCG CAGCGGAGGC AGA GCCGCAGCTG TTTGATCTGGTGGCG BRADO1272 1359024 - 1359797 + | putative gas vesicle synthesis protein, GvpF/L-like BRADO1273 1359801 - 1360052 + | putative gas vesicle synthesis protein, GvpG-like TERM 929 1360105 - 1360133 + G 75 -15.9 -2.73681 | opp_overlap 1360105 CAGGGTCGTCAAGGA GGCTGCGGCCGGC GTG GTCGGCCGCGGCA TCGTTCGCATCGATC BRADO1274 1360049 - 1362193 + | putative vesicle-fusing ATPase BRADO1275 1362190 - 1363122 + | putative gas vesicle synthesis protein, GvpF/L-like TERM 930 1363681 - 1363695 + G 71 -9.2 -3.83568 | overlap 1363680 CTTTGTCCGACGACC GCGCGT CAA GCGCGC TTCTTCTCAATCTGG BRADO1276 1363119 - 1363865 + | putative gas vesicle synthesis protein, GvpF/L-like BRADO1277 1363862 - 1364086 + | putative gas vesicle synthesis protein, GvpJ-like (GvpA-related) BRADO1278 1364083 - 1364736 + | hypothetical protein gvpK 1364754 - 1365056 + | gas vesicle synthesis protein K TERM 931 1365348 - 1365328 - g 72 -13.9 -3.02511 | GCGAGGTTCGCAAGA GCGGCGGCG CTG CGCAGCCGC CGGAGACCGCCGGCA TERM 932 1369558 - 1369536 - g 74 -10.4 -3.81951 | overlap 1369537 CTGGACAGCACCAAA TCGGCGGCCG TGA CGGTCGCCGG CCCGGTCGAAGCGGG TERM 933 1369557 - 1369537 - g 71 -13.9 -2.88849 | overlap 1369536 TGGACAGCACCAAAT CGGCGGCCG TGA CGGTCGCCG GCCCGGTCGAAGCGG BRADO1280 1365066 - 1369880 + | hypothetical protein gvpA 1370371 - 1370583 + | gas vesicle synthesis protein GvpA TERM 934 1370592 - 1370635 + F 100 -22.6 -2.53995 | gap 1, opp_overlap 1370590 1370588 1370587, overlap 1370596 GGCGTGACAACGATC CTGATCCTGAGGC-GCCGGGA ATT TCTCGGCAGCCTCAGGGTCGG TCCCTTCAAGTCAGT TERM 935 1371197 - 1371173 - g 70 -11.3 -3.59979 | overlap 1371174 GCGGCCGATCCGAAA CCCGAGACGGC CAC GCCGCCCCGGC CTCGTCCTGCCGAGA TERM 936 1371196 - 1371174 - g 72 -14.8 -2.75844 | overlap 1371173 CGGCCGATCCGAAAC CCGAGACGGC CAC GCCGCCCCGG CCTCGTCCTGCCGAG BRADO1283 1370669 - 1371433 + | hypothetical protein BRADO1284 1371486 - 1371977 + | hypothetical protein BRADO1285 1372593 - 1372042 - | hypothetical protein BRADO1286 1374527 - 1372878 - | hypothetical protein TERM 937 1372949 - 1372971 + gr 73 -11.2 -3.61398 | AGCGATCGCGGCTGC CGCTGCGGGC ATA GCTCGCATCG TTCTTCCACGAGCCC TERM 938 1373272 - 1373296 + gr 73 -8.5 -4.07568 | overlap 1373258 1373273 TCCCATTCGGCCTCG GTGGGAAGCCG GAA CGGCTTTCCGA TTTTCCGCGAGAGCC BRADO1287 1379418 - 1374484 - | helicase TERM 939 1376101 - 1376155 + gH 90 -13.5 -4.09739 | gap 1, opp_overlap 1376142 CAGTCGCGCCGGCAA CTGCT-CGGCGACGCGCCATGCCGGC ATCA GCTGGCATGGAATGCCGTCGTGGCAG TTTTCGAGAGCTTCG TERM 940 1377441 - 1377478 + gH 73 -12.5 -3.12327 | overlap 1377442 CCGGCGCGAGCATCT CGACCGCTGCGCCGGCC AGCC GGCGGTCGCCGCTGTCG TCTTGAGTGTGCGGC TERM 941 1377680 - 1377661 - GH 78 -6.4 -4.56597 | overlap 1377663 CGTCTCGCTCAAAAA TCGCCG CGGCCGAT CGGCGA ACCAGGCGTACGCGT TERM 942 1378209 - 1378183 - GH 100 -12.3 -4.59773 | opp_overlap 1378204 1378206 CGGCAGCGGGAAAAA CAGATCGCCGC GATCG GCGGCCATCTG CGCCGCGGGCGCGAT TERM 943 1379330 - 1379284 - GH 79 -3.5 -4.90778 | opp_overlap 1379329, overlap 1379328 1379329 CTGATGGAAAGAAAA GCATTGTCCGCCGGCGAGCTG GTGGT CGGACAGACGACTGACAATGC CGGCGTCGCGCAGGA TERM 944 1379544 - 1379526 - H 100 -11 -4.82901 | GTCCGTCGAGAAAAA CGACGAAC GCT GCTCGTCG CGATCAATGCCCGGC TERM 945 1380131 - 1380103 - H 71 -5.9 -4.32651 | overlap 1380109 AATAACTTAGCAAAA TCGAAAGCGCC ATCCGCG GGCGCAATCGA GGCTGGCGCGCCGCC TERM 946 1380140 - 1380109 - H 71 -8.6 -3.94846 | overlap 1380103 1380132 TTAGCAAAATCGAAA GCGCCATCCGCG GGCGCAAT CGAGGCTGGCGC GCCGCCGTCGCGCAA TERM 947 1380634 - 1380614 - g 79 -6.7 -4.66833 | overlap 1380616 TGCGAAGGCGAAAAA GCCTGCCGG CGT CGGGCAGTC CGCGTCGCTGGCGTC BRADO1290 1380453 - 1382153 + | hypothetical protein BRADO1291 1382277 - 1384619 + | putative general secretion pathway protein D BRADO1292 1384616 - 1385143 + | putative signal peptide TERM 948 1385364 - 1385393 + G 72 -13.5 -3.14132 | gap 1, overlap 1385390 GCGATCGCGCGGCAG CTCGGCCTGCCGCG GAT CG-GGCTGGCCGGG TTGCTCGCGGCCAAG BRADO1293 1385256 - 1386869 + | putative general secretion pathway protein E (Type II traffic warden ATPase) BRADO1294 1386919 - 1388088 + | putative general secretion pathway protein F BRADO1295 1388095 - 1388586 + | putative general secretion pathway protein G precursor (PilD-dependent protein pddA) BRADO1296 1388634 - 1389062 + | putative general secretion pathway protein H BRADO1297 1389124 - 1389441 + | putative general secretion pathway protein I; putative signal peptide BRADO1298 1389438 - 1390142 + | putative general secretion pathway protein J TERM 949 1390382 - 1390399 + G 88 -9.8 -4.41494 | opp_overlap 1390377 1390376, overlap 1390381 GTGCCGAAATCGCAG CGCGCC GCGGCG GGCGCG TTTTCCTTCCGGCTC TERM 950 1390571 - 1390605 + G 72 -14.2 -2.98823 | opp_overlap 1390543 1390583 GTCGCCTGGCGAACG CCGCTCACGGAATCCG GTG CGGATTCCGAGCGCGA TCTCTATCGGACGGC BRADO1299 1390145 - 1391080 + | putative general secretion pathway protein K BRADO1300 1391089 - 1392174 + | putative general secretion pathway protein L BRADO1301 1392171 - 1392722 + | putative general secretion pathway protein M BRADO1302 1392719 - 1393339 + | hypothetical protein TERM 951 1393403 - 1393362 - T 76 -10.7 -3.72893 | gap 1, opp_overlap 1393377, overlap 1393363 CACGCCGGTAGGAAA CGCCCGGCGGCG-TGCGG CAGCGGC CCGCGGCGCCTCCGGCCG CGCGAGGCCGCCGGC TERM 952 1393377 - 1393418 + T 72 -13.5 -2.79133 | gap 1, opp_overlap 1393362 1393363 CGCCCGGCGGCGTGC GGCAGCGGCC-CGCGGCGCC TCC GGCCGCGCGAGGCCGCCGGC TGTCGTCAGCGCTTG BRADO1303 1393690 - 1393424 - | hypothetical protein TERM 953 1395669 - 1395727 + G 85 -16 -3.63515 | gap 2, opp_overlap 1395697, overlap 1395670 AGGTCCCCTACGCGA -ATGCGGCGGCGCTG-CCTGCCGGATGC AAGCC GTTGCCGGCGGGACACCGCCGCCGCATC TTCTTCGGCCTCGCC TERM 954 1395670 - 1395725 + G 100 -21.1 -3.39784 | gap 1, opp_overlap 1395697, overlap 1395669 GGTCCCCTACGCGAA TGCGGCGGCGCTG-CCTGCCGGATGC AAGCC GTTGCCGGCGGGACACCGCCGCCGCA TCTTCTTCGGCCTCG BRADO1305 1394315 - 1396315 + | putative multicopper oxidase TERM 955 1396344 - 1396386 + F 100 -19.9 -3.62775 | gap 1 ATGTCCTTCGTGGCT CTCATCG-GACCGACGCCGC ATCC GCGGCGTCGGTCACGCCGAG TTCTTCGGCGGTGCT TERM 956 1396461 - 1396477 + F 76 -6.5 -4.46514 | ACATGCGTCGGCGTA GTCGCAC GAC GTTCGAC TTTCTTTGAATCGAT BRADO1306 1396883 - 1397341 + | hypothetical protein BRADO1307 1397406 - 1398200 + | putative thiamine biosynthesis lipoprotein APBE transmembrane BRADO1308 1398190 - 1398717 + | hypothetical protein TERM 957 1398721 - 1398765 + F 100 -10.6 -4.72272 | gap 1, overlap 1398723 AAGGTCGGTTGACAT CG-TCGTCAATCGGGGCGCGG CGAC CCGCGCCCCGGCTACTGATCG TTTTTGCTGGGGCAG TERM 958 1398723 - 1398762 + F 72 -12 -3.28472 | overlap 1398721 GGTCGGTTGACATCG TCGTCAATCGGGGCGCGG CGAC CCGCGCCCCGGCTACTGA TCGTTTTTGCTGGGG TERM 959 1399198 - 1399236 + G 71 -3 -4.7078 | gap 1, overlap 1399198 1399233 CTTGGAAGTCGGCTG CGGGACGGGGC-AAGCC ACCTTG GGCTTCGCCACGCTCGG TTTTTCGATACTTGC TERM 960 1399659 - 1399637 - g 70 -8.4 -3.99405 | GCAATCGAGCACAAA TGCTATCGCT GGA AGCGCCAGCA AACGACATCAGGCTA BRADO1309 1399061 - 1399846 + | putative SAM-dependent methyltransferases BRADO1311 1400599 - 1400216 - | hypothetical protein TERM 961 1400305 - 1400270 - G 91 -13.4 -4.18018 | opp_overlap 1400260 1400270 1400271, overlap 1400271 GCCGTCGATTGAAAA CGTGATGTCGTCATCG ATGC CGATGAAGACATCACC TTCCTCGGTGGTTGT TERM 962 1400270 - 1400305 + g 72 -13.4 -3.20703 | opp_overlap 1400270 1400271, overlap 1400260 1400271 GCCGTCGATTGAAAA CGTGATGTCGTCATCG ATGC CGATGAAGACATCACC TTCCTCGGTGGTTGT TERM 963 1400304 - 1400271 - G 84 -16.9 -3.10597 | opp_overlap 1400270 1400260 1400271, overlap 1400270 CCGTCGATTGAAAAC GTGATGTCGTCATCG ATGC CGATGAAGACATCAC CTTCCTCGGTGGTTG TERM 964 1400271 - 1400304 + g 79 -16.9 -2.5194 | opp_overlap 1400271 1400270, overlap 1400270 1400260 CCGTCGATTGAAAAC GTGATGTCGTCATCG ATGC CGATGAAGACATCAC CTTCCTCGGTGGTTG TERM 965 1401536 - 1401494 - H 74 -4.7 -4.62069 | opp_overlap 1401517, overlap 1401496 GGGGCAGCCGAAAAA CTTCGAGCGCGCGAC-GCTGC GAG GCTGCTGGCGCGTG-TCGATG GTCAACTTGGCACCA BRADO1312 1401983 - 1403041 + | putative toxic anion resistance protein (TelA) BRADO1313 1403038 - 1404618 + | hypothetical protein TERM 966 1404736 - 1404783 + G 100 -18.3 -3.78597 | gap 1, overlap 1404738 GCCTGCGTGATCGGC CTCGGCGC-CGGCGGCGGCGCC ATCGC GGCACTGGCGCCGCGCGCCGCG TTTCCGTTGCTCGAT BRADO1314 1404619 - 1405278 + | hypothetical protein BRADO1315 1405288 - 1406397 + | hypothetical protein BRADO1316 1406593 - 1407270 + | ATPase, ParA type BRADO1317 1407447 - 1407313 - | hypothetical protein BRADO1318 1408554 - 1407634 - | dihydrodipicolinate synthase TERM 967 1408196 - 1408178 - G 70 -2.2 -4.62471 | overlap 1408179 1408180 GCCAACGCGGAAAAA TGCGCCAG CAG CCCGCGCT GCGACGGGCGGACGT TERM 968 1408265 - 1408238 - G 72 -8.5 -4.16301 | gap 1 GAGATGAGATAGAAA TCGATCGG-CCA TGCTG CGGTCCGATCGA GCGCCTCGATCAGAT TERM 969 1408600 - 1408620 + r 70 -11.8 -3.21218 | opp_overlap 1408600 CGGGACATATAAAAA GCCCCGTC CTGGC GGCGGGGC TTGGTAGTGCGGCGT TERM 970 1408620 - 1408600 - R 100 -10.4 -5.03994 | gap 1, opp_overlap 1408600 CGGGACATATAAAAA GCCCCGTCC TGGC GG-CGGGGC TTGGTAGTGCGGCGT TERM 971 1408670 - 1408687 + r 86 -6.9 -5.00616 | overlap 1408672 GCGCGCGCGTCCACT GGTCCCC GGAT GGGGAGC TTTTTTCGACGACAG TERM 972 1408827 - 1408799 - R 71 -5.8 -4.36914 | overlap 1408816 1408818 TGTCGGGGCATAAAA CGGTCCCGCCAA AAAAA TAGCCGGGCCCG AAAGAGCCCGGCTGG TERM 973 1408841 - 1408816 - R 100 -12.5 -5.40072 | overlap 1408799 1408818 GTCCCGCCAAAAAAA TAGCCGGGCCC GAAA GAGCCCGGCTG GAGGTATTGGCCAAT TERM 974 1408839 - 1408818 - R 100 -15.1 -4.34482 | overlap 1408799 1408816 CCCGCCAAAAAAATA GCCGGGCCC GAAA GAGCCCGGC TGGAGGTATTGGCCA BRADO1320 1409949 - 1409026 - | LysR family transcriptional regulator TERM 975 1409152 - 1409170 + g 73 -3.8 -4.63218 | ATCCGACTCGCCGAA CAGCTG CACGAGA CGGCTG TTTTCTTCGACGAGA trxB 1410922 - 1409957 - | thioredoxin reductase, FAD/NAD(P)-binding BRADO1322 1411207 - 1411686 + | AsnC/Lrp family transcriptional regulator BRADO1323 1412219 - 1411815 - | hypothetical protein TERM 976 1412420 - 1412441 + r 77 -12.9 -3.67597 | opp_overlap 1412420 CCGTCAAAGGAGAAA GGGCCGCGC TTTC GCGCAGCCC TTGTTCGATCAGACG TERM 977 1412441 - 1412420 - R 100 -15.1 -4.13654 | opp_overlap 1412420 CCGTCAAAGGAGAAA GGGCCGCGC TTTC GCGCAGCCC TTGTTCGATCAGACG greA 1413044 - 1412478 - | transcription elongation factor GreA carB 1416631 - 1413167 - | carbamoyl phosphate synthase large subunit TERM 978 1415523 - 1415542 + g 75 -11.4 -3.64703 | TTGGCCGCGACCTTG GCGATCGG GAAG CCGGTCGC TTTCGATGCCAACGC TERM 979 1416698 - 1416678 - R 100 -13.9 -5.60993 | TCGGGCACAAAAAAA GGGCGCGCG TTT CGCGCGTCC CCGAAGGCCCAGGCG BRADO1326 1417956 - 1416796 - | major facilitator superfamily permease TERM 980 1417927 - 1417891 - G 72 -11.5 -3.61715 | opp_overlap 1417868, overlap 1417868 GATCGCGGGCAACAA GCCCGCGATCACGAACG CTT CGGTCCCGATCGCGAAC GTCGCCAAAGCCAGC BRADO1327 1418164 - 1418442 + | putative transcriptional regulatory protein (fragment) BRADO1328 1419410 - 1418691 - | putative S-adenosyl-L-methionine-dependent methyltransferase BRADO1329 1419504 - 1420031 + | putative DNA-binding stress protein (oxydative damage protectant) TERM 981 1420056 - 1420085 + T 100 -13.5 -5.25803 | opp_overlap 1420060, overlap 1420057 CAGATACAATCTTTA AGGACGCGCTGCG ACGA CGTGGCGCGTCCC TTTTTTGTAGGCGTT TERM 982 1420057 - 1420084 + T 100 -17 -3.74397 | opp_overlap 1420060, overlap 1420056 AGATACAATCTTTAA GGACGCGCTGCG ACGA CGTGGCGCGTCC CTTTTTTGTAGGCGT BRADO1330 1420631 - 1420179 - | permease family protein BRADO1331 1421061 - 1420639 - | hypothetical protein BRADO1332 1421151 - 1421480 + | Ars family transcriptional regulator BRADO1333 1422008 - 1421481 - | hypothetical protein BRADO1334 1422138 - 1423325 + | repressor BRADO1335 1423371 - 1424942 + | putative ABC transporter substrate-binding protein BRADO1336 1425445 - 1424954 - | thioesterase superfamily protein TERM 983 1425566 - 1425546 - R 86 -14 -3.91897 | opp_overlap 1425546 GGTCGGATGCAGAAA TGCCCGGG AGCGA CCCGGGCA TGTGATGTCGATCAG TERM 984 1425546 - 1425566 + r 74 -14 -2.8655 | opp_overlap 1425546 GGTCGGATGCAGAAA TGCCCGGG AGCGA CCCGGGCA TGTGATGTCGATCAG carA 1426788 - 1425592 - | carbamoyl phosphate synthase small subunit TERM 985 1427220 - 1427197 - g 100 -11.7 -4.72986 | gap 1 GAGCTGTACGAAAAA GGCGGCC-GC GCCGA GCTGGCCGCC AGTGAGCGTGAGGAG BRADO1338 1426921 - 1427436 + | hypothetical protein TERM 986 1427623 - 1427590 - f 71 -13.1 -3.05596 | CATCTTGCGATGCAA TCCGACCTCTCCCCG CAAG CGGGGAGAGGTAAGG GCCCGCACCAGCGCT BRADO1339 1427672 - 1429279 + | Acetyl-coenzyme A synthetase TERM 987 1429361 - 1429378 + F 77 -14.1 -3.28712 | GGGCTTGACCCGCCT GCGCGGC CGAA GCCGCGC TTCTGCGCGGCGAAG TERM 988 1429584 - 1429569 - f 77 -2.5 -5.08601 | TCATGCGAACAAAAA CAGTC AGGAGG GACCG CCGATGACCGCATCC BRADO1340 1429588 - 1430364 + | hypothetical protein BRADO1341 1430682 - 1431104 + | hypothetical protein BRADO1342 1431648 - 1431112 - | hypothetical protein BRADO1343 1431955 - 1431641 - | ArsR family transcriptional regulator BRADO1344 1432361 - 1432038 - | hypothetical protein TERM 989 1432760 - 1432778 + G 91 -17.4 -3.71848 | AGGCGAGGCGCCGCC GCCGCCGC CAC GCGGCGGC TTCTTCCTGCAGGGG BRADO1345 1432446 - 1433066 + | LysE family amino acid efflux protein BRADO1346 1433942 - 1433085 - | putative phenazine biosynthesis protein BRADO1347 1434090 - 1433947 - | hypothetical protein TERM 990 1434636 - 1434655 + G 85 -5.6 -5.00616 | gap 1 CGCCGGCTGGTCGAG GCCG-GGCG TAC CGCCGCAGC TTTTTTCGCGGGCGA BRADO1348 1434177 - 1435586 + | transcriptional regulator BRADO1349 1436523 - 1435720 - | hypothetical protein BRADO1351 1436691 - 1437518 + | cysteine protease transglutaminase-like protein BRADO1352 1437526 - 1437966 + | hypothetical protein dnaG 1438075 - 1440081 + | DNA primase TERM 991 1440365 - 1440392 + F 70 -10.6 -3.57144 | gap 1 AGCGACAGATCTAGA GGGTGGCG-ACGT GAG ATGTGCGCCGCCC TTTCCGCGTCGAGAA rpoD 1440490 - 1442601 + | RNA polymerase sigma factor RpoD TERM 992 1442678 - 1442654 - T 76 -9.9 -3.85522 | opp_overlap 1442656, overlap 1442603 1442655 AATCCATCAGAACAA CGCGGCGAACC GAA GGTTCGCCGTT TTTTTATGGCCAATG TERM 993 1442677 - 1442655 - T 74 -13.4 -2.9059 | opp_overlap 1442656, overlap 1442603 1442654 ATCCATCAGAACAAC GCGGCGAACC GAA GGTTCGCCGT TTTTTTATGGCCAAT TERM 994 1442656 - 1442676 + T 100 -16.9 -5.60993 | opp_overlap 1442603 1442655 1442654 TCCATCAGAACAACG CGGCGAACC GAA GGTTCGCCG TTTTTTTATGGCCAA BRADO1355 1443036 - 1442713 - | hypothetical protein TERM 995 1443053 - 1443037 - H 71 -9.3 -3.81488 | opp_overlap 1443043, overlap 1443038 TCTGTCGAAACACAA TGGCCGG TCT CCGGCCG CCAGAGAAGTTCATC TERM 996 1443052 - 1443038 - H 70 -12.8 -2.88571 | opp_overlap 1443043, overlap 1443037 CTGTCGAAACACAAT GGCCGG TCT CCGGCC GCCAGAGAAGTTCAT BRADO1356 1443070 - 1443303 + | hypothetical protein BRADO1357 1443368 - 1443700 + | hypothetical protein BRADO1358 1444204 - 1445145 + | hypothetical protein BRADO1359 1445433 - 1445269 - | hypothetical protein BRADO1360 1445594 - 1447822 + | O-linked N-acetylglucosamine transferase BRADO1361 1448293 - 1448057 - | hypothetical protein BRADO1362 1448511 - 1448885 + | hypothetical protein BRADO1363 1449436 - 1449143 - | hypothetical protein TERM 997 1449557 - 1449520 - R 71 -13.3 -3.05384 | opp_overlap 1449516 1449549 TCGCGCCCCACTCAA GGCCGGAACCGCCCGGT CCGG ACAGGGCTGATCCGACC GGATCTTGCATCGTT BRADO1364 1450121 - 1449603 - | hypothetical protein TERM 998 1450408 - 1450431 + H 85 -10.2 -4.36914 | gap 1, opp_overlap 1450389 1450407, overlap 1450413 1450414 CGAGGGCGCATTAAC CGCCAGCTCGC CGC GCG-GCGGGCG TTTTCTGACGCGACG BRADO1365 1450583 - 1451398 + | putative transglycolase TERM 999 1451526 - 1451495 - T 84 -16.7 -3.01924 | gap 1 GACTCGCTGTGAATA CTGGATCGCCCCGG TCAAG CCGG-GCGATCCAG CTTCGAGTGTCGCTA TERM 1000 1451628 - 1451614 - T 78 -4.9 -4.69053 | opp_overlap 1451627 GACGATCGAAGAAAA CGGGC CACAT ACCCG CCATGCGCAAACTGC BRADO1366 1452983 - 1452144 - | putative short-chain dehydrogenase TERM 1001 1452936 - 1452966 + g 73 -12.4 -3.42354 | opp_overlap 1452895, overlap 1452936 1452947 TGCGCGGCCGATGCC GCTGGCCGCGCCGG TGA TCGCCGCGGCCGCC TTGTCGATTGCCGTC BRADO1367 1453132 - 1453536 + | putative two-component response regulator BRADO1368 1453789 - 1453709 - | histone H1 (fragment) TERM 1002 1454628 - 1454592 - g 76 -8.5 -4.20516 | opp_overlap 1454592 1454611 GCTCGATGCAAGAAA CGGCCCGATCAACCCTG GCG CCCGGTTGGCCGGGCTG TTGTCGCTTCTCATC TERM 1003 1454889 - 1454916 + G 100 -18.4 -3.79043 | overlap 1454895 GCTCACCGAGGAGTG CGCCCGCGCCGA GCGC TCGGGGCGGGCG TTTGCGTTGCTGGTG BRADO1369 1454143 - 1455390 + | hypothetical protein BRADO1370 1455461 - 1456033 + | hypothetical protein TERM 1004 1456094 - 1456071 - T 91 -16 -3.61894 | overlap 1456059 1456074 AACCTTCCTCAACAA GAAGCCGGCG TCTC CGCCGGCTCC GATCGCATCCAAAAA TERM 1005 1456091 - 1456074 - T 86 -14.1 -3.9461 | overlap 1456071 CTTCCTCAACAAGAA GCCGGCG TCTC CGCCGGC TCCGATCGCATCCAA rpoH 1457033 - 1456134 - | RNA polymerase factor sigma-32 TERM 1006 1456489 - 1456503 + g 71 -12.8 -3.2794 | overlap 1456487 TTCAGCGAGGCGTCG CCGCCG AGG CGGCGG TTCATGTCGATCACG rluD 1458407 - 1457253 - | pseudouridine synthase (pseudouridines 1911, 1915, 1917 in 23S RNA) TERM 1007 1458629 - 1458583 - gH 70 -9.8 -3.66666 | GCCAAAACCCTCAAA CCCACCGGCCGCCTCCGCTTCG CCA CGGAGCCGTAGGGGCAGGGGGG CGCCCAACCTCCCCA BRADO1373 1458280 - 1458618 + | hypothetical protein TERM 1008 1459107 - 1459139 + FH 70 -9.8 -3.57144 | gap 1, overlap 1459128 1459129 ACCCTTCATCTCTGA CCCGTACGCGCGGCT CCTC AGCCTCGCG-ACGCG TTTCCGCGTCCGAGC TERM 1009 1459128 - 1459154 + FH 71 -8.7 -3.83026 | gap 1, overlap 1459107 1459129 CGCGCGGCTCCTCAG CCTCGCGACGCG TTTC CGCGTC-CGAGC TTTGCTCTCAGGCAC BRADO1375 1460106 - 1462307 + | putative site-specific DNA-methyltransferase (adenine-specific) TERM 1010 1464692 - 1464682 - g 79 -3.2 -5.0133 | GATTGGCCGAAAAAA GAAC GGT GCTC TGCAATTTATAGATG BRADO1376 1462313 - 1464787 + | type III restriction enzyme TERM 1011 1464899 - 1464881 - T 74 -6 -4.39277 | CAATATCAGAACAAA TAGCTTCA GCG TGAGGCTA CGCCATCCTCACCGC BRADO1377 1466081 - 1464897 - | cytochrome P450 BRADO1378 1466950 - 1466420 - | hypothetical protein BRADO1379 1467160 - 1467522 + | hypothetical protein BRADO1380 1467668 - 1468612 + | catalase TERM 1012 1468997 - 1469055 + F 79 -9.5 -4.14739 | gap 2, opp_overlap 1469000, overlap 1469000 1469001 GCGTTTGCCTGCTAA CGATCGGCGCGGCCCGCGTGATCGACGCA CTC TGCGACG-TAAT-CGTGTCGCGCCGCTTG TTTTCGCCTGAATCC TERM 1013 1469000 - 1469052 + F 72 -7.6 -4.19746 | gap 2, opp_overlap 1469000, overlap 1468997 1469001 TTTGCCTGCTAACGA TCGGCGCGGCCCGCGTGATCGACGCA CTC TGCGACG-TAAT-CGTGTCGCGCCGC TTGTTTTCGCCTGAA TERM 1014 1470338 - 1470322 - g 72 -4.3 -4.56597 | overlap 1470307 1470324 CCCGCCGCCGAAAAA TCCCCCG CCG CAGGGCA ACAACAATCCGCCTG BRADO1381 1469339 - 1470988 + | hypothetical protein TERM 1015 1471020 - 1471044 + F 100 -18.6 -4.4261 | opp_overlap 1471020, overlap 1471017 TCTCGGTCATGACAA GGCCGCCTGG TTCGT CCAGGCGGCC TTTTGCTGTTGCCGA TERM 1016 1471044 - 1471020 - f 95 -18.6 -3.40403 | opp_overlap 1471017 1471020 TCTCGGTCATGACAA GGCCGCCTGG TTCGT CCAGGCGGCC TTTTGCTGTTGCCGA BRADO1382 1471146 - 1473974 + | hypothetical protein BRADO1383 1473917 - 1475398 + | metallo-dependent phosphatase BRADO1384 1476517 - 1475480 - | NAD(P)-dependent oxidoreductase (putative inositol 2-dehydrogenase) aroQ2 1476999 - 1476514 - | 3-dehydroquinate dehydratase BRADO1386 1477231 - 1478193 + | Fis family transcriptional regulator aldB 1478314 - 1479858 + | aldehyde dehydrogenase BRADO1388 1481020 - 1480157 - | hypothetical protein TERM 1017 1480912 - 1480944 + g 70 -2.4 -4.63486 | opp_overlap 1480893 CGCGCCATGCCGTCA GCGCGCCGCCGTCC GGCCA GAGCAGCAGCACGC TTTTCTTGCCGACCT BRADO1389 1483010 - 1481133 - | hypothetical protein BRADO1390 1485097 - 1482992 - | hypothetical protein BRADO1391 1485900 - 1485094 - | hypothetical protein TERM 1018 1486058 - 1486038 - R 100 -15.4 -4.61566 | GTCTAAACGACAAAA CGCCGCCC GGGAG GGGCGGCG TTGCAGAGCAGGTCG BRADO1392 1487042 - 1486095 - | ABC transporter; periplasmic subunit, putative sugar-binding protein rbsC 1488174 - 1487143 - | sugar ABC transporter membrane protein rbsA 1489702 - 1488167 - | ABC transporter, ATP binding subunit (putative high-affinity D-ribose transport) xylB 1491427 - 1489826 - | xylulokinase (xylulose kinase) TERM 1019 1489973 - 1489998 + gH 70 -10.4 -3.66178 | gap 1, overlap 1489974 GGCGAGCCGCGCCAG TC-GCGCGGCC CCGAA GGCCGCGCCGG TTTCGCCTTCGGCCA TERM 1020 1490520 - 1490558 + gH 77 -13.7 -3.28712 | gap 1, opp_overlap 1490513 GTGATGAAGGTGGCG CCCGGCCGGATCGCGCCG ATGC CGAC-CGCGCCGGCCGGG TTGTCGCCGGCCCCG TERM 1021 1490879 - 1490897 + gH 70 -10.2 -3.63515 | opp_overlap 1490869 GACGAGCTTCGGCGC GGCGAAGC CGG GCATCGCC TTGTTGCCGGTCACC TERM 1022 1492105 - 1492135 + GH 70 -6.1 -4.20696 | overlap 1492129 1492132 CACATCCCGATGGGG CGCGTCGCGAGC-CC GGA GGAGATCGCGG-GCG TTTTCGCCTTCCTGG BRADO1396 1491409 - 1492245 + | glucose 1-dehydrogenase II TERM 1023 1492878 - 1492890 + G 70 -10.5 -3.71848 | GATCACCGGCCGCGC GGCCG ATC CGGCC TTGTTCCTCGGACCC BRADO1397 1492297 - 1493706 + | hypothetical protein BRADO1398 1493759 - 1495342 + | choline dehydrogenase TERM 1024 1495413 - 1495367 - T 88 -17.2 -3.09516 | opp_overlap 1495352 1495367 GCCCGGATGAGCGAA GCGACATCCGGGGTCTCCTGTG CAG CTCGTGTGACCCCGGATATCGC TTCGCTCATCCGGGC TERM 1025 1495367 - 1495413 + T 88 -17.2 -3.09516 | opp_overlap 1495367, overlap 1495352 GCCCGGATGAGCGAA GCGACATCCGGGGTCTCCTGTG CAG CTCGTGTGACCCCGGATATCGC TTCGCTCATCCGGGC BRADO1399 1497276 - 1495603 - | gamma-glutamyltranspeptidase family protein, ACY1 bifunctional acylase TERM 1026 1498951 - 1498974 + G 100 -12.4 -4.49311 | gap 1 TCCGTGACGCCAGGC CGGGTCGGGCG GTG CGC-CGGCCCG TTTTGTCATGATCGT BRADO1400 1497492 - 1498985 + | D-glutamate deacylase TERM 1027 1499498 - 1499446 - g 73 -14 -3.14132 | gap 2 CGTGCTGCTGACGAA GTCCGACCTGCTCGATCGCGCCGCGC TCG ACGAGGCGCG--CGCGCTGGTCGGGC GCGTCAAGCCGGCAT BRADO1401 1498982 - 1499911 + | putative cobalamin synthesis protein cobW BRADO1402 1501079 - 1499925 - | putative diguanylate cyclase (GGDEF) BRADO1403 1502259 - 1501147 - | hypothetical protein TERM 1028 1501200 - 1501235 + g 85 -14 -4.13014 | gap 1 AGGCCCGCGTCGTCG TCGACGGCCGCGGCGAC AGC GTCGCCGTTGTCG-CGA TTTTCGGCGTGTCGA TERM 1029 1502468 - 1502505 + H 70 -10.5 -3.65351 | gap 1, overlap 1502465 CGATTCGCTCCTGCG GGGCGTCCGGCTGCTGTC CGC GCCGGTACCCGGA-GCCC TTTGCGTCAGAGTGA BRADO1404 1502630 - 1503541 + | putative dihydrodipicolinate synthase TERM 1030 1503590 - 1503578 - f 76 -6.2 -4.56597 | overlap 1503562 1503580 GCCTGGCGTGAAAAA GGCC GTCAA GGCC GGGCTTGACCCAGCC BRADO1406 1503758 - 1506091 + | putative dehydrogenase/oxidase; molybdopterin binding protein TERM 1031 1506193 - 1506148 - T 71 -11 -3.4072 | gap 1, overlap 1506149 1506151 GAGCCCTTACCACAA GCACGCTGCGCCCCCCTCCCC CTTGC GGGGAGGGGGTCGGGG-GTGG GGGTCCCAGGGCGCT TERM 1032 1506192 - 1506149 - T 74 -14.5 -2.64218 | gap 1, overlap 1506148 1506151 AGCCCTTACCACAAG CACGCTGCGCCCCCCTCCCC CTTGC GGGGAGGGGGTCGGGG-GTG GGGGTCCCAGGGCGC BRADO1407 1507816 - 1506410 - | putative two-component system histidine kinase TERM 1033 1507051 - 1507088 + gT 73 -12.7 -3.16564 | CCAGCGGCGTCCGCA GCTGATGCGTCGCGTCG GCGA TGAAGCGCTGCATCAGC TTAATCCGCTCCGAC BRADO1408 1508456 - 1507791 - | OmpR family two component response transcriptional regulator BRADO1409 1508558 - 1509352 + | putative ABC transporter (ATP binding subunit) BRADO1410 1509370 - 1510236 + | putative ABC transporter; permease protein BRADO1411 1510275 - 1511288 + | putative periplasmic substrate-binding subunit (ABC transporter) TERM 1034 1511298 - 1511336 + T 84 -15.8 -3.29511 | opp_overlap 1511313 AGCTGAGCCGATCTA GGAGGCCTGCGGAAACGC GAT GCGCACCCGCAGGCCGCC TTCTGGCGAGGTCGA BRADO1412 1512647 - 1511295 - | putative two-component sensor histidine kinase ompR 1513358 - 1512651 - | OmpR family two-component response regulator TERM 1035 1513393 - 1513375 - H 70 -10.2 -3.62046 | overlap 1513377 CGATGGTTTTAAGAA CACCCGGC CGC GCCGGGCA ACCCGGGCCTGGACA TERM 1036 1513391 - 1513377 - H 74 -12.8 -3.38991 | overlap 1513375 ATGGTTTTAAGAACA CCCGGC CGC GCCGGG CAACCCGGGCCTGGA BRADO1414 1513568 - 1513837 + | hypothetical protein BRADO1415 1513958 - 1514587 + | putative signal peptide BRADO1416 1514603 - 1515502 + | hypothetical protein BRADO1417 1515519 - 1516016 + | hypothetical protein BRADO1418 1517246 - 1516266 - | hypothetical protein TERM 1037 1517286 - 1517260 - H 90 -13.9 -4.07687 | opp_overlap 1517262 1517264 ATGCCTCCCTTAAAA CATACCTGACA TGGAT TGTCAGGTATG CTGTGCGACAAGCCA gst1 1517335 - 1517979 + | glutathione S-transferase BRADO1420 1520007 - 1518049 - | aminopeptidase TERM 1038 1518752 - 1518740 - G 73 -9.1 -3.96148 | GCGTGGCAGTAGAAA CGCGT CCA ACGCG TGCGCGGGATCGGCC TERM 1039 1519699 - 1519753 + g 80 -15.6 -3.29144 | gap 2, opp_overlap 1519693 CACGTAATAGCCGGC GACCTCCGCGCGCGTG-CG-CCGCCG CCCGT CGGCCGTCATCTCGCGCGCGGCGGTC TTCTCGCGCCCATAG BRADO1421 1520486 - 1520058 - | AsnC/Lrp family transcriptional regulator BRADO1422 1520604 - 1520918 + | hypothetical protein BRADO1423 1520978 - 1521295 + | hypothetical protein BRADO1424 1521613 - 1521314 - | hypothetical protein BRADO1425 1521946 - 1522785 + | putative signal peptide TERM 1040 1523903 - 1523875 - g 77 -7.9 -4.37886 | CGACTGCGCAGAAAA CGGAAGCGGCGGC CAA GCCGCAGGCGCCG GTCAAGGCGGAGGCG BRADO1426 1523145 - 1525127 + | hypothetical protein TERM 1041 1525150 - 1525195 + F 100 -17.6 -3.86346 | overlap 1525151 TCTCTTGCGTGAGCG GATTCGACGAGGCGCCTCAC CGCGAC GTGAGGCGCCTCGTCGCACA TTTGTCCGCCGCTGC TERM 1042 1525151 - 1525194 + F 93 -21.1 -2.91593 | overlap 1525150 CTCTTGCGTGAGCGG ATTCGACGAGGCGCCTCAC CGCGAC GTGAGGCGCCTCGTCGCAC ATTTGTCCGCCGCTG BRADO1427 1525317 - 1526852 + | putative signal peptide BRADO1428 1528131 - 1526857 - | Acyl-coenzyme A transferase TERM 1043 1528203 - 1528223 + r 100 -16.9 -3.67517 | AAGCGTCAGTATGGC CAGGAGCGG GCA CCGCTCCTG TTTGAAATCTTGGTG cspA 1528518 - 1528318 - | cold shock protein, DNA binding TERM 1044 1528661 - 1528673 + r 74 -4.7 -4.58663 | GTGATCGATATCGTG GCGGC TTT GCGGC TTTTTGGCCGCTCGT cyaA 1530485 - 1528752 - | ferredoxin:adenylate/guanylate cyclase TERM 1045 1529981 - 1529970 - G 75 -7.2 -4.36914 | overlap 1529971 CGCGCGCTGATAAAA CGGC TTCA GCCG TAGCCAGAAATGCAG TERM 1046 1531846 - 1531833 - g 81 -3.7 -5.03715 | overlap 1531835 AGGAGCTGGAAAAAA CCGGC GCGA GCTGG ATCGCGACCTCCGAC BRADO1431 1530683 - 1532215 + | putative glycosyl transferase BRADO1432 1533247 - 1532216 - | hypothetical protein BRADO1433 1534728 - 1533244 - | hypothetical protein TERM 1047 1534657 - 1534636 - G 70 -2.3 -4.65895 | gap 1, opp_overlap 1534654, overlap 1534650 CGTGGGATTCAAAAA GCT-CTCG CCATAAT CGAGCAGC GCGCGGGCCGAGAGC BRADO1434 1534899 - 1535594 + | hemolysin III BRADO1435 1535631 - 1536425 + | putative short-chain dehydrogenase/reductase TERM 1048 1537549 - 1537564 + F 70 -10.4 -3.63991 | CAGCGGCCGCGCATC GGCGCT TCGA AGCGCC TTGTTGCGAATGCTC BRADO1437 1537736 - 1539472 + | hypothetical protein TERM 1049 1539807 - 1539791 - T 100 -10.8 -5.40072 | overlap 1539792 TCGCTCCTAAAAAAA CGCCCC GCAAG GGGGCG GGGCTCGAGGCATGA TERM 1050 1539811 - 1539792 - T 81 -12.1 -3.83561 | overlap 1539791 CGCTCCTAAAAAAAC GCCCCGC AAGGGG GCGGGGC TCGAGGCATGAGCAT BRADO1438 1541719 - 1539998 - | putative signal peptide TERM 1051 1540791 - 1540844 + g 80 -17.3 -2.71144 | gap 1, opp_overlap 1540788, overlap 1540803 1540804 TTCTGGAAGGCAGCC TGCAGC-GCCGCGGAGGCTGCGGTCA GCT TGGCGGCCGCCGCCGTGGCGGCTGCC TGGTTGGCCGCGGTC TERM 1052 1540803 - 1540861 + g 100 -19.4 -3.10622 | opp_overlap 1540788, overlap 1540791 1540804 GCCTGCAGCGCCGCG GAGGCTGCGGTCAGCTTGGCGGCCGCCG CCG TGGCGGCTGCCTGGTTGGCCGCGGTCGG ATTCTTTTCCGCCTG TERM 1053 1540804 - 1540862 + g 89 -10.9 -4.18506 | gap 2, opp_overlap 1540788, overlap 1540791 1540803 CCTGCAGCGCCGCGG --AGGCTGCGGTCAGCTTGGCGGCCGCCG CCG TGGCGGCTGCCTGGTTGGCCGCGGTCGGA TTCTTTTCCGCCTGC mdlC 1543731 - 1542049 - | benzoylformate decarboxylase TERM 1054 1543748 - 1543707 - G 74 -15.3 -2.55544 | opp_overlap 1543706 1543723, overlap 1543703 1543711 1543715 CGAGGAGCGAAGCGA CGAAGCAATCCAGAGTTCC GGGC AAAGCCCTGGATTGCTTCG CTTCGCTCGCAATGA BRADO1440 1544629 - 1543775 - | hypothetical protein BRADO1441 1545738 - 1544626 - | formyl-coenzyme A transferase NAD(P)-binding BRADO1442 1547129 - 1545963 - | acyl-CoA dehydrogenase BRADO1443 1547887 - 1547288 - | putative sulfopyruvate decarboxylase beta subunit BRADO1444 1548414 - 1547869 - | putative sulfopyruvate decarboxylase alpha subunit BRADO1445 1550041 - 1548737 - | cytochrome P-450 TERM 1055 1550209 - 1550242 + r 87 -17.6 -2.87931 | gap 1, overlap 1550212 TGCTTGGATGGGCCG CAGATGCCCTCTCCC ACAAG GGGAGAGGGCA-CTG TATCTCGCAGCTAGG TERM 1056 1550212 - 1550240 + r 78 -14.6 -2.9914 | overlap 1550209 TTGGATGGGCCGCAG ATGCCCTCTCCC ACAAG GGGAGAGGGCAC TGTATCTCGCAGCTA BRADO1446 1551597 - 1550302 - | cytochrome P-450 ivd2 1551824 - 1552996 + | isovaleryl-CoA dehydrogenase TERM 1057 1553068 - 1553084 + F 90 -2.1 -5.40072 | overlap 1553071 AGATATTTTGATCAT CGTCGTC CAG GCCGGTG TTTTTTTCCGGCCGA TERM 1058 1553596 - 1553629 + GF 75 -13.1 -3.35679 | gap 1 TCGCGCGCGACGCTA CCGGCTGACGCG-CAC GGT GTGGCGCGGCATCCGG TTCTGGATGGACGGC BRADO1448 1553294 - 1554343 + | hypothetical protein BRADO1449 1554318 - 1555451 + | putative metalloendopeptidase BRADO1450 1556426 - 1555677 - | hypothetical protein TERM 1059 1556335 - 1556347 + g 75 -3.3 -4.77165 | CCGTCGGTGATCTCG GCGTC GGT GAAGC TTTTCTTCTCGGCGC TERM 1060 1556500 - 1556477 - R 100 -18.2 -3.72576 | opp_overlap 1556489 1556492 CGGTCCTTGACGAAA GCCGGAAGCG GGGA CGCTTCCGGC CCGGACGGACGCTCT BRADO1451 1557081 - 1556548 - | hypothetical protein TERM 1061 1557082 - 1557052 - G 73 -11 -3.69395 | overlap 1557053 TCCATTATTGAAGAA CTGGGCGTGTGCCG TCG CGGCACTCGCCAAC GTCGCCATTGCAGCA TERM 1062 1557081 - 1557053 - G 73 -14.5 -2.81316 | overlap 1557052 CCATTATTGAAGAAC TGGGCGTGTGCCG TCG CGGCACTCGCCAA CGTCGCCATTGCAGC BRADO1452 1557395 - 1558945 + | hypothetical protein TERM 1063 1558999 - 1558946 - f 70 -12.2 -3.13475 | gap 1, opp_overlap 1558948 1558983 1558995, overlap 1558975 GAAGTCCAGATGTAA GTCGTTTGCCCACGACCGGCGGCCG CAAAT CGGCCGCCGGCTGATGGCAG-CGTC ATTGCCGCATTTTGA TERM 1064 1558948 - 1558997 + F 78 -15.6 -2.73123 | gap 1, opp_overlap 1558946 1558975, overlap 1558983 1558995 AGTCCAGATGTAAGT CGTTTGCCCACGACCGGCGGCCG CAAAT CGGCCGCCGGCTGATGGCAG-CG TCATTGCCGCATTTT TERM 1065 1559042 - 1559061 + F 86 -6.4 -4.96996 | overlap 1559043 CAGCACGACGCGTGT TGATGGGG ACGT CTCCATCG TTTGTTTTGTTTGGG BRADO1453 1559093 - 1559596 + | hypothetical protein TERM 1066 1559798 - 1559752 - T 73 -11.5 -3.54424 | gap 2, opp_overlap 1559787 1559788 TGCGATGGCTGCAAA GCGCG-GCATCGGTC-CGGTCGG AAG CCGCGCGAGATCGACGCTCGCGC GAAGCCGCCCCGAGA TERM 1067 1559787 - 1559836 + T 72 -12 -3.34895 | opp_overlap 1559752, overlap 1559788 GAAGCCGCGCGAGAT C-GACGCTCGCGCGAAGCCGCCCC GAGA GGGGCGGCCG-GCGCGAACGCCTG TTACTTCGACATGCC TERM 1068 1559788 - 1559834 + T 83 -15.7 -3.24329 | gap 1, opp_overlap 1559752, overlap 1559787 AAGCCGCGCGAGATC GACGCTCGCGCGAAGCCGCCCC GAGA GGGGCGGCCG-GCGCGAACGCC TGTTACTTCGACATG TERM 1069 1559849 - 1559867 + T 75 -11.7 -3.62522 | overlap 1559862 CTGTTACTTCGACAT GCCGTCG CCCGA CGACGGC TTCTTGGCCGACTTC BRADO1454 1560037 - 1559837 - | putative signal peptide BRADO1456 1560779 - 1560408 - | cytochrome c TERM 1070 1560848 - 1560870 + H 76 -11.2 -3.68988 | opp_overlap 1560846 ACCTCGGACATCATC GGGCCGGAGC AGG GCTCCCGTCC TTGTCTTGGATCAAG TERM 1071 1560960 - 1560945 - H 85 -10.4 -4.37247 | AAACGAATGAACAAA CGGACG ATGT CGTCCG GGGAGGTGCCTGGTG BRADO1457 1560973 - 1562139 + | hypothetical protein TERM 1072 1562384 - 1562366 - g 70 -11.6 -3.39286 | overlap 1562364 ATATCACGCCAAACA GCAGGCCG AGG CGGCCAGC TCGCTGAAGTCCTCG TERM 1073 1563161 - 1563146 - g 72 -6.8 -4.18018 | gap 1, overlap 1563149 CCTGCTGATCGAAAA CGACGCC GCT GGCG-CG GAGGCCATGGTCAGC BRADO1458 1562136 - 1563485 + | two-component hybrid sensor and regulator BRADO1459 1564320 - 1563439 - | two-component LuxR family transcriptional regulator (modular protein) BRADO1460 1565155 - 1564394 - | two-component LuxR family transcriptional regulator BRADO1461 1566357 - 1565152 - | Mox; cytochrome c like protein TERM 1074 1566389 - 1566421 + r 100 -14.8 -4.1552 | overlap 1566390 TGTTATTTGTTTGGT CGACCGGCACGGTC TTTGC GACCGTGCCGGGCC TTTGTTGCGGACGTC TERM 1075 1566390 - 1566420 + r 90 -18.3 -3.08991 | overlap 1566389 GTTATTTGTTTGGTC GACCGGCACGGTC TTTGC GACCGTGCCGGGC CTTTGTTGCGGACGT BRADO1462 1568135 - 1566444 - | quinoprotein ethanol dehydrogenase TERM 1076 1567145 - 1567131 - G 83 -4.2 -5.1356 | GGCCACGAAGAAAAA GCCG TTGCGGT CGGC CTTCATCAGGGTCGG BRADO1463 1568534 - 1569901 + | protein prenyltransferase TERM 1077 1569905 - 1569938 + T 93 -9.5 -4.72272 | gap 1, opp_overlap 1569898 1569901, overlap 1569906 ATGAGGAACTAGCGA TCGCTTGCGC-GCGAC GCC GTCACCGCGCAGGCGC TTTTTGCTCCGCCAA TERM 1078 1569906 - 1569937 + T 76 -13 -3.43042 | gap 1, opp_overlap 1569898 1569901, overlap 1569905 TGAGGAACTAGCGAT CGCTTGCGC-GCGAC GCC GTCACCGCGCAGGCG CTTTTTGCTCCGCCA dinB 1571067 - 1569961 - | DNA polymerase IV BRADO1465 1571335 - 1572240 + | ribonuclease Z trkD 1572517 - 1574394 + | KUP family potassium transport system low affinity BRADO1467 1574506 - 1574937 + | putative signal peptide TERM 1079 1575241 - 1575221 - T 83 -9.6 -4.25104 | GGTTGGCGAGGAAAA CTGCGCGG GGCTG CCGCGCTG CGTCCGACCGAACGG BRADO1468 1576640 - 1575321 - | hypothetical protein TERM 1080 1576329 - 1576371 + g 77 -10.5 -3.9461 | gap 1, overlap 1576329 CTTCATGCGGTTGAT GG-CATCGGTCTTCTTGCCG AGAT CGGCGAGCTGGCCGGTGGCC TTGTTCTTGAGCGCG BRADO1469 1577354 - 1576731 - | hypothetical protein TERM 1081 1577497 - 1577485 - H 70 -10.5 -3.53811 | opp_overlap 1577485 1577485 1577486 GCGATTGTCGGGAAA GGGGC ATA GCCCC TGCTTAGCCCATGTT TERM 1082 1577881 - 1577897 + G 81 -5.7 -4.78107 | overlap 1577882 CGCGCGGCGTCACCG TCGCCGG CAA CCCGCGG TTTTTCGTCGTGGTC BRADO1470 1577604 - 1578035 + | hypothetical protein cysQ 1578875 - 1578039 - | CysQ protein BRADO1472 1579121 - 1579783 + | putative Signal transduction histidine kinase cheA 1580019 - 1582817 + | chemotaxis protein cheA cheW 1582844 - 1583314 + | chemotaxis protein cheW cheY 1583384 - 1583749 + | chemotaxis protein cheY cheB 1583825 - 1585021 + | chemotaxis-specific methylesterase cheR 1585018 - 1585887 + | chemotaxis protein methyltransferase TERM 1083 1586480 - 1586506 + G 70 -13 -3.03771 | opp_overlap 1586498 CCATCGGCGCCAAGC GCGTCGTGATCG ACA CGATCGAGACGC TGTTCGGCGGTCTCG TERM 1084 1587270 - 1587286 + G 72 -13.7 -3.03771 | CGATTTCCTGAAGGC GCGCGGT GTC ACCGCGC TGTTCACCAATCTGG kaiC 1586062 - 1587819 + | circadian clock protein KaiC kaiB 1587816 - 1588112 + | circadian clock protein BRADO1480 1588124 - 1589611 + | signal transduction histidine kinase BRADO1481 1589962 - 1589612 - | putative response regulator receiver (CheY-like protein) TERM 1085 1590166 - 1590129 - R 74 -5.3 -4.56597 | CGCGTGTGGCAAAAA GCGCGAACGATTGCCCG TGAT CGGGCTCGCATCCTCGC GGATCGAGAGCCCGC BRADO1482 1591280 - 1590105 - | putative glutathionylspermidine synthase family protein BRADO1484 1591532 - 1591287 - | hypothetical protein TERM 1086 1591404 - 1591452 + g 72 -14.4 -3.05384 | gap 1 GGCGCGGCACTGCAG CCGGCCGTGT-GACCCGGGCACG GCTT CGAGCCCGGGGCCGCACGACCGC TTGCGTGAAAAGCCC BRADO1485 1592046 - 1591651 - | hypothetical protein BRADO1486 1592453 - 1592049 - | hypothetical protein BRADO1487 1593263 - 1592523 - | GntR family transcriptional regulator BRADO1488 1593456 - 1594457 + | ABC transporter substrate-binding protein TERM 1087 1594544 - 1594585 + G 85 -17.9 -2.62983 | gap 1, overlap 1594538 AGGCGTTCTCGCGCT CCGGCG-CGCTGCCGGCGGC GTT GCTGCCGGCGCCGTCGACGG TCGTATGGGCGTGGG BRADO1489 1594459 - 1595268 + | ABC transporter permease BRADO1490 1595271 - 1596050 + | ABC transporter ATP-binding protein TERM 1088 1596127 - 1596155 + F 89 -14.6 -3.86346 | overlap 1596128 1596130 CTCGGCACCGGCGGT GCACCCTCTCCC CTTGC GGGAGAGGGTGG TTTCTCACGAAGTGA TERM 1089 1596128 - 1596154 + F 90 -18.1 -2.91593 | overlap 1596127 1596130 TCGGCACCGGCGGTG CACCCTCTCCC CTTGC GGGAGAGGGTG GTTTCTCACGAAGTG TERM 1090 1596130 - 1596152 + F 78 -14.9 -3.00946 | overlap 1596128 1596127 GGCACCGGCGGTGCA CCCTCTCCC CTTGC GGGAGAGGG TGGTTTCTCACGAAG TERM 1091 1596230 - 1596175 - f 100 -16.2 -3.98826 | gap 1, overlap 1596167 1596171 1596176 TCACGAAGTGAGAAA CCGGGTGAGGGGTCTCTCTCCGC-GAT CTC ATCTGTCGAGGCAGACCCCTCACCCGA CCGAGTTTGCTGCAC TERM 1092 1596229 - 1596176 - f 88 -17.5 -2.98814 | gap 1, overlap 1596167 1596171 1596175 CACGAAGTGAGAAAC CGGGTGAGGGGTCTCTCTCCGC-GAT CTC ATCTGTCGAGGCAGACCCCTCACCCG ACCGAGTTTGCTGCA BRADO1491 1596367 - 1597095 + | putative Asp/Glu/Hydantoin racemase BRADO1492 1597121 - 1598524 + | dihydropyrimidinase BRADO1493 1598817 - 1600934 + | putative nuclease TERM 1093 1601103 - 1601072 - T 83 -9.4 -4.30719 | gap 1, opp_overlap 1601092 TCGCGGCACAACAAA CCGTCATCGCCCGGC TTG ACCGGGCGATC-CAG TACGCTGGGACGGTC BRADO1494 1601721 - 1601236 - | hypothetical protein BRADO1495 1602632 - 1602150 - | putative cytochrome c TERM 1094 1603214 - 1603230 + r 74 -2.2 -4.82901 | overlap 1603211 GGCCAGACCTGTGGT GACTGC CGCCT GCATTC TTTTTCTGCAGGCGG TERM 1095 1603780 - 1603761 - R 100 -12.8 -5.38054 | CCCCACAAACAAAAA CCCCGCCA TTTG CGGCGGGG CCCAGTCTGGGAGGA ctrA 1604534 - 1603833 - | two-component cell cycle transcriptional regulator ctrA fliI 1604953 - 1606278 + | flagellum-specific ATP synthase BRADO1499 1606388 - 1606807 + | putative flagelar FliJ protein TERM 1096 1606859 - 1606840 - f 81 -10.6 -4.22652 | opp_overlap 1606840 GGAGACTATCGAAAA CCCGGGCC GCAA GGTCCGGG TTTTTCGTCGCGCCC TERM 1097 1606840 - 1606859 + F 100 -12.8 -4.72272 | opp_overlap 1606840 GGAGACTATCGAAAA CCCGGGCC GCAA GGTCCGGG TTTTTCGTCGCGCCC BRADO1500 1606958 - 1607506 + | RNA polymerase ECF-type sigma factor BRADO1501 1607564 - 1608688 + | hypothetical protein TERM 1098 1608733 - 1608705 - T 100 -14.7 -5.0538 | opp_overlap 1608710, overlap 1608710 TGCGACGGCAAAAAA GAAAACGCCCG TGGGGAG CGGGCGTTTTC GGTAGTCGACTTGGG TERM 1099 1608710 - 1608728 + T 79 -9.5 -4.21194 | opp_overlap 1608710 1608705 CGGCAAAAAAGAAAA CGCCCGT GGGGA GCGGGCG TTTTCGGTAGTCGAC TERM 1100 1608728 - 1608710 - T 100 -8.8 -5.42198 | opp_overlap 1608710, overlap 1608705 CGGCAAAAAAGAAAA CGCCCG TGGGGAG CGGGCG TTTTCGGTAGTCGAC BRADO1502 1609022 - 1608822 - | putative signal peptide TERM 1101 1609349 - 1609318 - R 95 -10.2 -4.56597 | gap 1, opp_overlap 1609326, overlap 1609319 1609320 GTTTGCCTCGAAAAA TGGCAAAACCGGTCC CAA GGCCCGGTTCTGC-A TTCAACAACTTGGGA TERM 1102 1609349 - 1609319 - R 72 -11.8 -3.33744 | opp_overlap 1609326, overlap 1609318 1609320 TTTGCCTCGAAAAAT GGCAAAACCGGTCC CAA GGCCCGGTTCTGCA TTCAACAACTTGGGA TERM 1103 1609348 - 1609320 - R 77 -15.3 -2.60032 | opp_overlap 1609326, overlap 1609318 1609319 TTGCCTCGAAAAATG GCAAAACCGGTCC CAA GGCCCGGTTCTGC ATTCAACAACTTGGG flhA 1611443 - 1609392 - | flagellar biosynthesis protein FlhA TERM 1104 1611500 - 1611475 - H 76 -5.9 -4.65895 | overlap 1611477 TCGCCGATCGAAAAA CCGCCGGCCGG TGCA CCGGCCCCCTG ACCCGCCGTGACGTC TERM 1105 1611671 - 1611693 + H 77 -14.2 -2.92246 | overlap 1611667 1611673 CGACACGCACATTCC CACTGGGCAA TTT TTGCCCGGTG TATGGTTAGCGTTCG BRADO1504 1612721 - 1613647 + | putative para-nitrobenzyl esterase BRADO1505 1614085 - 1613855 - | hypothetical protein BRADO1506 1614528 - 1614902 + | hypothetical protein BRADO1509 1617431 - 1615206 - | O-linked N-acetylglucosamine transferase TERM 1106 1617833 - 1617819 - H 71 -12.8 -3.05816 | GGAGGGCGCAGGGAA GGCCGG GCG CCGGCC GCGCCCGTGGCCCGC BRADO1511 1618372 - 1618869 + | putative acetyltransferase protein TERM 1107 1618926 - 1618958 + T 75 -14.2 -2.78816 | gap 1, opp_overlap 1618888 TCTCACCGATATGCC GGCGGTG-GGAAGAC CGTC GTCATCCTCACCGCC TCTGCTCGGGCGTGC BRADO1512 1619277 - 1618951 - | hypothetical protein BRADO1514 1619600 - 1620190 + | putative shikimate kinase BRADO1515 1620337 - 1621155 + | hypothetical protein BRADO1517 1622077 - 1621340 - | hypothetical protein BRADO1518 1622222 - 1624297 + | putative methyl-accepting chemotaxis protein BRADO1519 1624598 - 1624323 - | putative periplasmic copper binding protein TERM 1108 1624453 - 1624471 + g 78 -10.2 -4.07687 | TAGACCATGGTCATG GCCTCGTC CAT GCCGAGGC TTTTGGCCGGGCCGT BRADO1520 1625965 - 1624664 - | putative multicopper oxidase; putative copper resistance protein A BRADO1521 1627405 - 1625993 - | putative Outer membrane efflux protein; putative copper resistance protein B BRADO1522 1627680 - 1627414 - | hypothetical protein BRADO1523 1628223 - 1627750 - | hypothetical protein TERM 1109 1628384 - 1628407 + H 75 -13.8 -3.06796 | CGCGCCCGATGCTCA CCTCGCCCCG CTTG CGGGGAGAGG TTGGATGGCATCGCC BRADO1524 1628625 - 1629863 + | major facilitator superfamily permease BRADO1526 1630414 - 1631514 + | putative TRAP-type uncharacterized transport system BRADO1527 1631934 - 1631530 - | hypothetical protein TERM 1110 1633077 - 1633105 + G 77 -13.1 -3.53012 | overlap 1633078 TACGCGATCATGCGT GCGCTGATCGCGC GCG GCGTGATCGGCGA TTTCCGCGCGCCGGA TERM 1111 1633078 - 1633104 + G 77 -16.6 -2.71712 | overlap 1633077 ACGCGATCATGCGTG CGCTGATCGCGC GCG GCGTGATCGGCG ATTTCCGCGCGCCGG BRADO1528 1632063 - 1633256 + | putative kynureninase BRADO1529 1633253 - 1634092 + | tryptophan 2,3-dioxygenase BRADO1530 1634126 - 1634953 + | putative hydrolase (Serine esterase) amdA 1635162 - 1636667 + | amidase BRADO1532 1637500 - 1636685 - | 2-haloacid dehalogenase TERM 1112 1637545 - 1637562 + H 78 -6.3 -4.65895 | opp_overlap 1637545 1637544 1637547 GACAAAGTGAATAAT GACGATG TGAG TATCGTC TTTTTCGATAGCGGG BRADO1533 1637585 - 1638445 + | LysR family transcriptional regulator BRADO1534 1640062 - 1638467 - | putative gamma-glutamyltranspeptidase BRADO1535 1640585 - 1640202 - | hypothetical protein TERM 1113 1640644 - 1640626 - R 75 -11.6 -3.5393 | AGTAGGGTGGGCAAA GCGGCGCC GCA GGCGACGC GTGCCCACCATCTGA BRADO1536 1643171 - 1640745 - | hypothetical protein TERM 1114 1642065 - 1642121 + g 71 -15 -2.62396 | gap 1 GGCCTGCGTCTGGCA GCCGCGCTGTTGCGCCAGCGCGTCCTG CGGC CAGC-CGCGTTGGCCCCGCGGCGCCGC TGATGTCACCGCCTG BRADO1537 1644594 - 1643353 - | hypothetical protein BRADO1538 1646277 - 1644649 - | ABC transporter permease/ATP-binding protein TERM 1115 1646332 - 1646320 - R 70 -10.5 -3.53811 | opp_overlap 1646303 1646326 1646327 CGTAGGGTGGGCAAA GGCGC GAC GCGCC GTGCCCACCGTGATC BRADO1539 1647482 - 1646592 - | ABC transporter substrate-binding protein TERM 1116 1648565 - 1648541 - g 71 -12.2 -3.26471 | gap 1, overlap 1648542 CGACCGCGACATCAA GGCGACGACGG AGGG CC-TCGTCGCC GCGCATACGCTGTTG TERM 1117 1648718 - 1648736 + G 74 -5.2 -4.4959 | overlap 1648720 GATGATGCGCTCGGG GATCGTGG CGG CCGCGATG TTTTCCTTCATTCAG BRADO1540 1648098 - 1648943 + | ABC transporter permease BRADO1541 1648940 - 1650007 + | putative ABC transporter ATP-binding protein TERM 1118 1651017 - 1651041 + G 71 -9.1 -3.85698 | overlap 1651018 ACTACGCCTATGCCG CCGGGCGCGCG CAG CGCACGCTCGA TTTCTGGAACAAGGA BRADO1542 1650038 - 1651069 + | ABC transporter substrate-binding protein BRADO1543 1651151 - 1651981 + | ABC transporter permease TERM 1119 1652111 - 1652099 - f 70 -10.5 -3.53811 | opp_overlap 1652104 CGTAGGGTGGGCAAA GGCGC GCA GCGCC GTGCCCACCGCGATG BRADO1544 1652198 - 1653805 + | amidohydrolase BRADO1545 1653811 - 1654812 + | putative cobalamin synthesis protein cobW TERM 1120 1654938 - 1654981 + T 80 -14.6 -3.14931 | gap 1, opp_overlap 1654896 1654937 1654935 1654930 AACGCAAGCCAATAT CGGGATTCCGGGTTCAAGGCC TCC GGCCTTGC-CCCGGAATGACG TTGCTAGGGGATGCA BRADO1546 1655779 - 1655003 - | IclR family transcriptional regulator BRADO1547 1656002 - 1657057 + | ABC transporter ATP-binding protein BRADO1548 1657054 - 1657911 + | ABC transporter permease BRADO1549 1657908 - 1658711 + | ABC transporter permease BRADO1550 1658716 - 1659009 + | oxydoreductase (2Fe-2S ferredoxin like subunit) TERM 1121 1659555 - 1659517 - g 73 -12.4 -3.37493 | gap 1, opp_overlap 1659487 CTGGCAATACATGAA GGC-CGGCGTCGAGATC GTGGCT GTGCTCGACGCCGCGCC GCTGTCGGCGAAATT BRADO1551 1659002 - 1660396 + | oxidoreductase (pyridine nucleotide-disulphide subunit) TERM 1122 1660757 - 1660796 + G 81 -8.4 -4.46212 | gap 1, opp_overlap 1660751, overlap 1660771 1660773 CCACAATCAGCTCAG CGAGCGCTTCGGCATCGCC GGC GGCGTCGTCGGCG-GCTCG TTTTGTGCTGGCGAC BRADO1552 1660380 - 1661528 + | oxidoreductase BRADO1553 1661541 - 1662587 + | ABC transporter, perisplasmic binding protein BRADO1554 1663603 - 1662896 - | hypothetical protein TERM 1123 1662981 - 1662967 - G 78 -10 -4.09685 | overlap 1662971 GCCCAGTTCGGAAAA CCGAGA GTG TCTCGG GACGCGTGACACCCG TERM 1124 1663328 - 1663316 - G 74 -10.5 -3.76224 | GGCGGAGTGATGAAA GGCGC TGC GCGCC AACACCAGGCTGTCG BRADO1555 1663786 - 1665141 + | transcriptional regulator BRADO1556 1666433 - 1665129 - | putative metallo-hydrolase BRADO1557 1668477 - 1666564 - | hypothetical protein BRADO1558 1669698 - 1668499 - | alpha-beta hydrolase family esterase BRADO1559 1670334 - 1669765 - | putative signal peptide TERM 1125 1670121 - 1670131 + g 76 -8.2 -4.2349 | GGGCGACGGTGAAGT GGGC GCG GCCC TTTTCGCTGTGGAAG BRADO1560 1671113 - 1670445 - | putative aldolase garD 1672962 - 1671424 - | (D)-galactarate dehydrogenase TERM 1126 1673059 - 1673015 - R 72 -11.9 -3.27525 | opp_overlap 1673038 1673042 1673044, overlap 1673010 GGTGGGCAAAGCGAA GCGTGCCCACCGTCTAGCGTC TTG GTCGACCGTCGGTGGGCACGG CGCTTGCGCGCCTTT TERM 1127 1673042 - 1673090 + r 73 -11.1 -3.55524 | gap 3, opp_overlap 1673015 1673010, overlap 1673038 1673044 TCTAGCGTCTTGGTC GA-CCGT-CGGTGGGC-ACGGCGC TTGC GCGCCTTTGCCCACCCTACGGGTC TTCGTTTCCGTCATT TERM 1128 1673044 - 1673087 + r 71 -13.9 -2.60283 | gap 2, opp_overlap 1673015 1673010, overlap 1673042 1673038 TAGCGTCTTGGTCGA CCGT-CGGTGGGC-ACGGCGC TTGC GCGCCTTTGCCCACCCTACGG GTCTTCGTTTCCGTC BRADO1563 1674674 - 1673187 - | aldehyde dehydrogenase; NAD-linked gudD 1676048 - 1674693 - | (D)-glucarate dehydratase 1 TERM 1129 1674785 - 1674807 + g 70 -6.2 -4.18018 | overlap 1674765 1674777 GTGCGCCGAGCCCGT GGCTCTTGTA AAG TTCATGAGCC TTTTCGATGGCGCCG kdgD 1677284 - 1676340 - | 5-dehydro-4-deoxyglucarate dehydratase TERM 1130 1677401 - 1677425 + r 70 -11.6 -3.19175 | opp_overlap 1677394 1677391, overlap 1677371 GCCAATGACGGTATC GATTGATACG GATGG CGTATCAATC TTCCGTCTGTTGCAC BRADO1566 1678322 - 1677420 - | LysR family transcriptional regulator TERM 1131 1678068 - 1678090 + g 78 -14.1 -3.57615 | CTTGCCGCTGGCGAT GCGCTGCGC CACCT GCGCGGCGC TTTCCGCCATCTTCA TERM 1132 1679404 - 1679386 - R 100 -13.1 -5.55698 | opp_overlap 1679381 TACAACGCAAAAAAA CGGCGGC ACGAG GCCGCCG TTCGAGTTTGAGACC gudP 1680794 - 1679439 - | major facilitator superfamily D-glucarate permease aphA 1681143 - 1682267 + | acetylpolyamine aminohydrolase mcpa 1682346 - 1684127 + | methyl-accepting chemotaxis protein BRADO1572 1684184 - 1684468 + | hypothetical protein pps 1686900 - 1684465 - | phosphoenolpyruvate synthase TERM 1133 1685791 - 1685821 + g 83 -8.9 -4.57569 | gap 1, overlap 1685771 1685771 GATCTTCTCGCCGAC GGCGCGGCCGGTCG CGAG CGGCTTGCCG-GCC TTTTTCAGCACATAG BRADO1574 1687007 - 1688185 + | putative ABC transporter-like BRADO1575 1689083 - 1688145 - | carbohydrate kinase pfkB family; 6-phosphofructokinase TERM 1134 1688354 - 1688314 - G 100 -14 -4.37658 | gap 1, overlap 1688301 AAGGCGCCGAGAAAA CTGTCGCCGGCGCCGA-CA GCGT TGACCGGCACCAGCGTCAG CGGCTGCGCACGCAG glk 1690067 - 1689087 - | glucokinase (glucose kinase) TERM 1135 1689692 - 1689639 - G 76 -15.9 -2.8805 | gap 1, overlap 1689642 ATCATTCGGGAGATA GCAGGCCGCGCCGAATCCGGTGCCCG GGC CGATCACCAGCATCGGCGCGCCCT-C GACCGCCGCATGGCC TERM 1136 1689690 - 1689642 - G 87 -18.7 -2.6927 | overlap 1689639 ATTCGGGAGATAGCA GGCCGCGCCGAATCCGGTGCCCG GGC CGATCACCAGCATCGGCGCGCCC TCGACCGCCGCATGG BRADO1577 1691455 - 1690064 - | putative beta-glucosidase TERM 1137 1690982 - 1690940 - G 82 -17.1 -3.05816 | gap 1, opp_overlap 1690933 GCAGGGCTCATTGAA GGTGGCGAAGCGCT-TGACG CGGT CGCCATAGCGCCTTGCCACC AGCGCGGTATAGTCG TERM 1138 1691535 - 1691560 + H 79 -8.9 -4.26871 | GCAGGGGCCGTGACC TTCGAGGCGGC ACGA GCCGCCGCCAA TTTGTTGCTCCGTTA BRADO1578 1691800 - 1692750 + | putative oligopeptide ABC transporter (permease protein) BRADO1579 1692759 - 1693625 + | putative oligopeptide ABC transporter (permease protein) BRADO1580 1693622 - 1694632 + | putative oligopeptide ABC transporter (ATP binding protein) BRADO1581 1694629 - 1695681 + | putative oligopeptide ABC transporter (ATP binding protein) TERM 1139 1697101 - 1697112 + G 72 -7.2 -4.1891 | overlap 1697096 CTGCTGGCCACCGAC GCCG CCGC CGGC TTTCTGTTCCAGCCG BRADO1582 1695715 - 1697220 + | putative oligopeptide ABC transporter (substrate-binding protein) TERM 1140 1697298 - 1697266 - T 81 -15.6 -3.02461 | overlap 1697268 CAACGCTGCCCAATA CAGTGCCCTCTCCC CTTGC GGGAGAGGGCATCG ACGGCTGATCAGCTT TERM 1141 1697296 - 1697268 - T 78 -14.6 -3.06815 | overlap 1697266 ACGCTGCCCAATACA GTGCCCTCTCCC CTTGC GGGAGAGGGCAT CGACGGCTGATCAGC TERM 1142 1697320 - 1697376 + T 79 -15.1 -2.86475 | GATCAGCTTGTTCGG TCGGGTGAGGGGTCTCTCTCCGCACGT CAC GCCCGTGGAGACATACCCCTCACCCAA TCTCGTATGCCGTTC BRADO1583 1697655 - 1697494 - | hypothetical protein BRADO1584 1697886 - 1698809 + | thioredoxin reductase BRADO1585 1698885 - 1699052 + | hypothetical protein BRADO1586 1699902 - 1699060 - | putative oligopeptide ABC transporter (permease protein) TERM 1143 1699844 - 1699806 - G 77 -16 -3.03124 | TCTGATCGGCGAAGA TCGCGACCACCAGCATCG CCG CGATCCAGGCGATCGCGA TGGTGACGGAGAGGG BRADO1587 1700846 - 1699914 - | oligopeptide ABC transporter permease BRADO1588 1701835 - 1700843 - | putative oligopeptide ABC transporter (ATP binding protein) TERM 1144 1700999 - 1700978 - G 70 -10.1 -3.73224 | gap 1 GCAGCGCGGATGAAA GGCGCAGCCC GAG GGAC-GCGCC GCCGGATTGGGCGGA BRADO1589 1702806 - 1701832 - | putative oligopeptide ABC transporter (ATP binding protein) BRADO1590 1704448 - 1702811 - | putative oligopeptide ABC transporter (substrate-binding protein) BRADO1591 1705311 - 1704490 - | putative xylose isomerase BRADO1593 1705658 - 1706176 + | hypothetical protein BRADO1594 1706847 - 1706203 - | hypothetical protein BRADO1595 1708097 - 1706880 - | putative DNA-binding protein TERM 1145 1707465 - 1707443 - G 70 -13.4 -3.05844 | opp_overlap 1707461 TGTCCGATCGGAACA GCGCCTCGAC CTC GTCGAGCCGC AGCAGCCGCTCGTTC BRADO1596 1708407 - 1708943 + | hypothetical protein BRADO1597 1708990 - 1709247 + | putative signal peptide BRADO1598 1710329 - 1709544 - | ABC transporter ATP-binding protein BRADO1599 1711102 - 1710326 - | ABC transporter permease TERM 1146 1711234 - 1711211 - R 84 -16 -3.09635 | gap 1, overlap 1711225 ATTGCCAGGAGCCAA CGGGTCCGCGC AAA GCGCGG-CCCG ATGACAGGCTCCGCG BRADO1600 1712274 - 1711330 - | ABC transporter substrate-binding protein hutC 1713139 - 1712408 - | histidine utilization repressor BRADO1602 1714494 - 1713136 - | N-formimino-L-glutamate deiminase TERM 1147 1714845 - 1714895 + G 74 -15.4 -2.62616 | gap 1, opp_overlap 1714875 CCCACGAGTTCGAAC TGCGCCTCGCCGGCGCGAGCTAT GAGGAG ATCGCGCGCGCCGGCGGCG-GCA TCGTGTCCACGGTAG hutI 1714583 - 1715797 + | imidazolonepropionase hutH 1715794 - 1717341 + | histidine ammonia-lyase hutU 1717351 - 1719021 + | urocanate hydratase bchI 1719052 - 1720152 + | magnesium-chelatase 38 kDa subunit (Mg-protoporphyrin IX chelatase) bchD 1720149 - 1721888 + | magnesium chelatase subunit D BRADO1608 1722026 - 1722991 + | putative alpha/beta hydrolase fold BRADO1609 1723037 - 1723942 + | putative Alpha/beta hydrolase, putative protoporphyrin IX magnesium chelatase bchO-like. TERM 1148 1725056 - 1725083 + G 70 -10.6 -3.60502 | gap 1, opp_overlap 1725056, overlap 1725059 AGCTACTCGACGACA TCTTCCGCC-GCA AGG TGCTGGCGGATGA TTTCAGCCTCTATCT crtI 1723993 - 1725531 + | phytoene dehydrogenase (phytoene desaturase) crtB 1725528 - 1726568 + | phytoene synthase BRADO1612 1726591 - 1726734 + | hypothetical protein TERM 1149 1726866 - 1726823 - T 70 -13 -2.87132 | gap 1, opp_overlap 1726833 1726838 GCGCTCGCGGAGAGA CGGTGGGC-ACGCTGCCGCCC TTC GGGCGTCTGCTTTGCCCACCC TACTACGGCAGCTTC TERM 1150 1726833 - 1726855 + T 70 -10.4 -3.5393 | opp_overlap 1726823, overlap 1726838 AGAGACGGTGGGCAC GCTGCCGCCC TTC GGGCGTCTGC TTTGCCCACCCTACT TERM 1151 1727042 - 1727068 + T 85 -15 -3.61398 | GGGTCCCGGATCGGC GACGCGCCGCGC TTC GCGCGTCGCGGC TTGTTCGGGACGACA crtC 1727910 - 1727206 - | neurosporene and anhydrorhodovibrin hydratase crtD 1729604 - 1728066 - | hydroxyneurosporene and rhodopin dehydrogenase crtE 1729716 - 1730585 + | geranylgeranyl pyrophosphate synthetase (GGPP synthetase) (farnesyltranstransferase) TERM 1152 1730893 - 1730933 + G 70 -11.1 -3.59979 | overlap 1730873 1730871 1730876 1730894 GCGGCTGGCGCGACG CGCTGCTGGCCAGTGCT TCGTTCC AGCGCTGGGCGGCAGCC TTTCCGCTGACGCGG TERM 1153 1730894 - 1730932 + G 72 -14.6 -2.75844 | overlap 1730873 1730871 1730876 1730893 CGGCTGGCGCGACGC GCTGCTGGCCAGTGCT TCGTTCC AGCGCTGGGCGGCAGC CTTTCCGCTGACGCG TERM 1154 1731851 - 1731879 + G 73 -13.2 -3.31144 | GATGGGGCAGGGACG GC-CGCGCAGCGCG GCT CGC-CTGCGCGAGC TTCTCCACATGGCAG crtF 1730820 - 1731965 + | demethylspheroidene and didehydrorhodopin O-methyltransferase TERM 1155 1732642 - 1732589 - g 86 -16.8 -3.25823 | gap 1 GGTGTGGGAGAGCAA TCCGGAGCGCG-CCGATGGCGCGAT GGGGT ATCGCGTCATCGATCCCGCTCAGGA CACGAGGCGCGATTA bchC 1732056 - 1732997 + | 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase TERM 1156 1733633 - 1733688 + G 75 -9 -4.11394 | gap 2, opp_overlap 1733622 1733621 1733663 AAACTCGGCGGCAAT GTC-G-GCGTCGCCGGCATCGTCATC AACAAG GATGACGGCACCGGCGAGGCGCAGGC TTTTGCCAATGCGGT bchX 1732994 - 1734004 + | bacteriochlorophyllide reductase subunit TERM 1157 1735430 - 1735414 - g 73 -13.7 -3.16564 | GGCGCAGGTCATCAA TGCCGCC ATC GGCGGCA AGGCCCGGTTCGACG bchY 1734008 - 1735594 + | bacteriochlorophyllide reductase subunit bchZ 1735594 - 1737045 + | bacteriochlorophyllide reductase Z subunit BRADO1621 1737077 - 1737304 + | hypothetical protein TERM 1158 1737377 - 1737422 + F 74 -14.8 -2.64616 | gap 2, opp_overlap 1737365 GAATTCGCGCGGCTC GCCGCG-CGGA-TGCCATCCCG GCAA CGGGATGGCGCTTCGACGCCGC TCATCTCGGTGGGCG pufB 1737475 - 1737702 + | light harvesting 1 beta subunit pufA 1737719 - 1737907 + | light harvesting 1 alpha subunit TERM 1159 1737973 - 1737925 - f 77 -13.2 -3.61398 | gap 2 CTTCGGCTCCAACAA TGGGAAGCGGGC--GTAGGCTCGG CGG CAGACCCTGCTCGCCCGCTTCCCA AATCTCCACGCAATT pufL 1738088 - 1738930 + | photosynthetic reaction center subunit L pufM 1738949 - 1739875 + | photosynthetic reaction center M protein TERM 1160 1739925 - 1739957 + G 83 -12.6 -4.08216 | opp_overlap 1739928, overlap 1739927 1739928 ATTCCAATCACGTCG AAACGGCCGGGCGC ACCAC GCGTCCGGCCGGTC TTTTGGAAGCCATGC TERM 1161 1739927 - 1739955 + G 83 -15.2 -3.63922 | opp_overlap 1739928, overlap 1739925 1739928 TCCAATCACGTCGAA ACGGCCGGGCGC ACCAC GCGTCCGGCCGG TCTTTTGGAAGCCAT TERM 1162 1739928 - 1739954 + G 87 -18.7 -2.78032 | opp_overlap 1739928, overlap 1739927 1739925 CCAATCACGTCGAAA CGGCCGGGCGC ACCAC GCGTCCGGCCG GTCTTTTGGAAGCCA TERM 1163 1739954 - 1739928 - g 89 -17.2 -3.59315 | opp_overlap 1739928 1739927 1739925 CCAATCACGTCGAAA CGGCCGGGCGCA CCA CGCGTCCGGCCG GTCTTTTGGAAGCCA hmuO 1739894 - 1740577 + | heme oxygenase TERM 1164 1740582 - 1740605 + T 72 -7.4 -4.20783 | gap 1, overlap 1740566 1740585 1740586 TCGGCCGCTGAAAGT TGGCCGCGTCC TCT GGACGCG-CTG TTTCTTGGCTCGCAT TERM 1165 1740585 - 1740603 + T 74 -10.2 -3.70307 | overlap 1740566 1740582 1740586 GCCGCTGAAAGTTGG CCGCGTCC TCT GGACGCGC TGTTTCTTGGCTCGC TERM 1166 1740586 - 1740602 + T 72 -13.7 -2.81702 | overlap 1740566 1740585 1740582 CCGCTGAAAGTTGGC CGCGTCC TCT GGACGCG CTGTTTCTTGGCTCG BRADO1627 1742149 - 1740791 - | putative transposase TERM 1167 1741340 - 1741384 + g 79 -4.8 -4.73388 | overlap 1741352 CCGCGCCTGCGGATC GGTGGTGGAGGCCCGAGGCT CCTTC GGCTTCTTGCCGTTACCGCC TTTTTCCTCGAGCTT BrbphP 1744573 - 1742399 - | bacteriophytochrome ppsR2 1745944 - 1744574 - | transcriptional regulator PpsR2 cycA 1746273 - 1746707 + | cytochrome c2 BRADO1631 1747228 - 1746962 - | hypothetical protein bchP 1748442 - 1747237 - | geranylgeranyl reductase BRADO1633 1749776 - 1748445 - | light harvesting pigment major facilitator family (MFS) transporter, Bch2-like bchG 1750699 - 1749773 - | bacteriochlorophyll/chlorophyll a synthase ppsR1 1752143 - 1750716 - | Fis family transcriptional regulator TERM 1168 1751755 - 1751802 + g 76 -14.9 -3.14132 | gap 2 TTCTGCTGGAGGGCT GCG-GTGGCGCGC-ACATCGCGG CCGA CCGCGATGTAGCGGGCCGCGCCC TTGATCGCGACGACC BRADO1636 1753119 - 1752223 - | regulatory protein bchF 1753349 - 1753939 + | 2-vinyl bacteriochlorophyllide hydratase TERM 1169 1754478 - 1754497 + G 78 -15 -3.30243 | GCCGTCATTGCTCGT CGTCGGCG CGCT CGCCGACG TTGTCGAGGATCAGT bchN 1753936 - 1755219 + | light-independent protochlorophyllide reductase subunit N TERM 1170 1755846 - 1755864 + GF 70 -10.2 -3.58522 | overlap 1755847 CGCCGGCCGATCTCG CCCGCCTG CCG CAGGCGGA TTTCAACATCGTGCT TERM 1171 1755847 - 1755863 + GF 72 -13.7 -2.74792 | overlap 1755846 GCCGGCCGATCTCGC CCGCCTG CCG CAGGCGG ATTTCAACATCGTGC bchB 1755221 - 1756777 + | light-independent protochlorophyllide reductase subunit B bchH 1756752 - 1760342 + | magnesium chelatase subunit H chlL 1760339 - 1761244 + | protochlorophyllide reductase iron-sulfur ATP-binding protein TERM 1172 1761879 - 1761920 + G 80 -15.1 -3.39327 | gap 1 GAAAATCACGATCTC GCCGATTGGCGCTGCGCCCG CAG CTGCCGCATCGCCAA-CGGC TTCTACATCTCCCAG bchM 1761258 - 1761959 + | Mg-protoporphyrin IX methyl transferase lhaA 1761956 - 1763386 + | photosynthetic complex (LH1) assembly protein LhaA puhA 1763406 - 1764185 + | reaction center protein H chain (photosynthetic reaction center H subunit) BRADO1646 1764182 - 1764832 + | hypothetical protein BRADO1647 1764846 - 1765337 + | hypothetical protein BRADO1648 1765334 - 1765639 + | hypothetical protein acsF 1765636 - 1766697 + | magnesium-protoporphyrin IX monomethyl ester cyclase TERM 1173 1767123 - 1767173 + G 100 -10.5 -5.08601 | CCAACCGCCTGAGCT GGTGGACCTTCGCGGCACTG-CTGG TGC TCAGACAGAGC-GCGAAGATCAACC TTTTTCTTGGCGTAC BRADO1650 1766711 - 1767766 + | hypothetical protein hemA 1767763 - 1768974 + | 5-aminolevulinate synthase bchE 1769071 - 1770675 + | Mg-protoporphyrin IX monomethyl ester oxidative cyclase 66kD subunit bchJ 1770677 - 1771318 + | 4-vinyl protochlorophyllide reductase cbbR 1772287 - 1771367 - | RuBisCO operon transcriptional regulatory protein TERM 1174 1772338 - 1772322 - H 76 -6.6 -4.49389 | opp_overlap 1772321 ATCGCATAAGGAAAA CTTTGG TCAAT CCAAAG ATATTGAAATTTCCC cbbF 1772435 - 1773505 + | D-fructose-1,6-bisphosphatase protein cbbP 1773555 - 1774430 + | phosphoribulokinase (phosphopentokinase) (PRKase) (PRK) cbbT 1774442 - 1776454 + | transketolase cbbA 1776498 - 1777580 + | fructose-1,6-bisphosphate aldolase rbcL 1777615 - 1779075 + | ribulose bisophosphate carboxylase TERM 1175 1779269 - 1779235 - g 72 -4.9 -4.57073 | opp_overlap 1779267 TACTGCCTCGAAAAA GGCTGGGCAGTGAAC ATCGA GTTCACCGACGATCC GCATCCCCGCAACAC cbbS 1779148 - 1779567 + | ribulose bisphosphate carboxylase small chain (RuBisCO small subunit) TERM 1176 1779622 - 1779568 - f 88 -16.6 -3.35996 | gap 3 GAGCGCTACTCATAA CGTCAGCCGGTGCTGAAGTC-C-CCGC CAGC GCGGTGGGACTTCAGCGCCGGCTC-CG CCGCAACAATAAAAT BRADO1661 1779730 - 1780671 + | CbbX-like protein BRADO1662 1780668 - 1781393 + | haloacid dehalogenase-like hydrolase BRADO1663 1781544 - 1782233 + | TetR family transcriptional regulator BRADO1664 1782880 - 1782329 - | hypothetical protein TERM 1177 1782790 - 1782848 + g 72 -13.1 -3.12351 | gap 2, overlap 1782793 CGATCGTCTCCTGGC TGAGG-GCC-GGATCCGTCGAGGGCGCGG TGG TCGTGCCCGCTGCGGAGCCCGGCGCTTCA TTGGCTGTCGCCCAG TERM 1178 1782793 - 1782844 + g 73 -12.8 -3.39142 | gap 1, overlap 1782790 TCGTCTCCTGGCTGA GGGCC-GGATCCGTCGAGGGCGCGG TGG TCGTGCCCGCTGCGGAGCCCGGCGC TTCATTGGCTGTCGC BRADO1665 1783291 - 1784055 + | putative lytic murein transglycosylase TERM 1179 1784130 - 1784077 - T 87 -19.2 -2.60909 | opp_overlap 1784091, overlap 1784091 AAACCGATAGAACAT CTG-CAAACAAGAAAGCGGCGCTTCA TCAC TGAAGCGCCGCTT-CTCGTTAGTCAG TCAGGCTTCGGCATC TERM 1180 1784116 - 1784091 - T 100 -19.1 -4.56978 | opp_overlap 1784091, overlap 1784077 TCTGCAAACAAGAAA GCGGCGCTTCA TCAC TGAAGCGCCGC TTCTCGTTAGTCAGT TERM 1181 1784091 - 1784116 + T 100 -19.1 -3.54297 | opp_overlap 1784091 1784077 TCTGCAAACAAGAAA GCGGCGCTTCA TCAC TGAAGCGCCGC TTCTCGTTAGTCAGT katG 1786324 - 1784144 - | catalase; hydroperoxidase HPI(I) oxyR 1786553 - 1787482 + | oxidative stress transcriptional regulator TERM 1182 1787811 - 1787824 + F 72 -4.5 -4.65895 | overlap 1787812 CTGGCTCTTTGGTCA TGCCA CGAC TGGCG TTTTTGCGTGGAACG BRADO1668 1787972 - 1788427 + | putative signal peptide BRADO1669 1788603 - 1789199 + | hypothetical protein BRADO1670 1789196 - 1789444 + | hypothetical protein BRADO1671 1789497 - 1789685 + | hypothetical protein BRADO1672 1789869 - 1790192 + | hypothetical protein TERM 1183 1791077 - 1791065 - f 71 -4.7 -4.4017 | TGAACCTTTATAAAA GCCAC ACT GAGGC CCCGTAAAGCGGCCC pstS 1791148 - 1792158 + | high-affinity phosphate ABC transporter periplasmic substrate-binding protein TERM 1184 1792207 - 1792172 - f 70 -11.8 -3.1372 | gap 1, overlap 1792170 1792175 GATCGTCGACGAACA CCATTCCCCTCTCCCGG TCG CCGGGGGAGGGGA-CGC TACCGGGGTCAGGCG TERM 1185 1792205 - 1792175 - f 81 -16.8 -2.77523 | overlap 1792172 1792170 CGTCGACGAACACCA TTCCCCTCTCCCGG TCG CCGGGGGAGGGGAC GCTACCGGGGTCAGG pstC 1792222 - 1793253 + | high-affinity phosphate ABC transporter membrane protein TERM 1186 1793410 - 1793432 + G 74 -5.5 -4.56597 | gap 1, opp_overlap 1793407 1793408 GCTGTTCTACAACGG CCTCGCCGGC CTCA GCCTGC-AGG TTTTTACCGCCGACA pstA 1793258 - 1794133 + | high-affinity phosphate ABC transporter membrane protein pstB 1794151 - 1794951 + | high-affinity phosphate ABC transporter ATP-binding protein phoU 1794982 - 1795698 + | transcriptional repressor for high-affinity phosphate uptake TERM 1187 1795799 - 1795777 - g 73 -13.4 -3.28712 | GCTGCTGCGCTACAA CCTCGAAGCC GAA GGCTACGAGG TCGAGACCGTGGCGC phoB 1795715 - 1796422 + | two-component regulatory system response regulator BRADO1680 1796509 - 1797825 + | hypothetical protein hupN 1798094 - 1799110 + | hydrogenase nickel incorporation protein hupN hupU 1799141 - 1800157 + | uptake hydrogenase accessory protein HupU TERM 1188 1801328 - 1801382 + G 70 -13.5 -3.06183 | opp_overlap 1801319 1801316 1801344 AAACGAGCCGCGAGG CGGCCGATGGCAACTACGT-CGGCCTC GTT GAGGCCGCACGCGGCAGCC-TCGGCCA TTGGCTCGCAGTGCG hupV 1800154 - 1801593 + | uptake hydrogenase accessory protein HupV hupS 1801818 - 1802915 + | uptake hydrogenase small subunit TERM 1189 1803280 - 1803298 + G 72 -8.9 -4.11404 | opp_overlap 1803259 AGCTCTGCCTGCAGG TGCACGA CCATC TCGTGCA TTTCTATCATCTGCA hupL 1802937 - 1804727 + | uptake hydrogenase large subunit precursor hupC 1804741 - 1805484 + | Ni/Fe-hydrogenase, 1 b-type cytochrome subunit hupD 1805497 - 1806081 + | hydrogenase maturation protein hupD TERM 1190 1806177 - 1806199 + G 71 -12.7 -3.23393 | overlap 1806175 CAGCTTCGACGGCGA GCAGCGCCG CGTCT CGGTGCTGC TGTTGTCGAATCCGC hupF 1806106 - 1806396 + | hydrogenase expression/formation protein HupF hupG 1806631 - 1807077 + | hydrogenase expression/formation protein hupG hupH 1807074 - 1807937 + | hydrogenase expression/formation protein hupH hupI 1807934 - 1808146 + | rubredoxin hupI TERM 1191 1808600 - 1808559 - g 72 -14.4 -3.01924 | gap 1, opp_overlap 1808582 CACGGCGCCCGAAGA CGAGGC-CGACACCGCGCG GGTAT CGCGCGGCATCGAGCGCCG CGCGTTCCTGCGCGG TERM 1192 1808582 - 1808604 + G 72 -13.4 -3.14132 | opp_overlap 1808559 ACACCGCGCGGGTAT CGCGCGGC ATCGAGC GCCGCGCG TTCCTGCGCGGCACG hupJ 1808143 - 1808640 + | hydrogenase expression/formation protein hupJ hupK 1808637 - 1809734 + | hydrogenase expression/formation protein hupK BRADO1695 1810298 - 1810011 - | hypothetical protein hypA 1809727 - 1810068 + | hydrogenase expression/formation protein HypA TERM 1193 1810667 - 1810685 + G 70 -11.6 -3.39449 | overlap 1810668 GGCCTATCGCCGGCT GCCGCCGC TGC GCGGCGGA TTGCTGTTCATCGAG TERM 1194 1810668 - 1810684 + G 71 -15.1 -2.63348 | overlap 1810667 GCCTATCGCCGGCTG CCGCCGC TGC GCGGCGG ATTGCTGTTCATCGA hypB 1810437 - 1811033 + | hydrogenase-3 accessory protein TERM 1195 1812016 - 1811995 - g 76 -15.9 -2.81888 | overlap 1811987 TGGCAAACGGAACGA GGCGCTGGT CTGC ACCAGCGCC AATCCCAGCGGTCAG TERM 1196 1813163 - 1813214 + G 71 -15 -2.64155 | gap 1, overlap 1813160 1813161 CGCGGCTGCAGAGCC G-CCGGCGTCGATGCGTGGCTGCCG CGC CGGCTGCCGCCCAACGATGGCGGAC TGAGTTTAGGGCAGG hypF 1811030 - 1813288 + | carbamoyl phosphate phosphatase, [NiFe] hydrogenase maturation protein hypC 1813312 - 1813524 + | hydrogenase expression/formation protein HypC hypD 1813521 - 1814648 + | hydrogenase expression/formation protein hypE 1814645 - 1815685 + | hydrogenase maturation protein HypE hoxA 1815694 - 1817151 + | two component sigma-54-dependent hydrogenase Fis family transcriptional regulator TERM 1197 1817138 - 1817127 - gT 100 -5.8 -5.78622 | CGATCTGAAAAAAAA TGGC AAAG GCCA CGCACTCTCCTGAAT BRADO1702 1817126 - 1818490 + | sensor histidine kinase BRADO1703 1819362 - 1818502 - | putative transport protein, yfdC-like TERM 1198 1819421 - 1819411 - R 73 -6.8 -4.38712 | opp_overlap 1819411 CCGACGCTGACAAAA GAGC CGG GCTC TCTCTGCGGCCTGAA BRADO1704 1820214 - 1819492 - | GntR family transcriptional regulator BRADO1705 1820991 - 1820278 - | GntR family transcriptional regulator TERM 1199 1820397 - 1820361 - G 79 -8.7 -4.4078 | gap 2 GGTGGTGAATGAAAA CGCCCGCCGCGCGCGAG ATGTG CTCGCG-GCT-CAGGCG TTCGGCATCGGCGCT TERM 1200 1821185 - 1821219 + H 74 -9.3 -3.9461 | gap 2, overlap 1821164 CGCCCTCGGAGGGCA GCGCGCT-C-TTCGGCG GTC TGCCGATTGTAGCGCGC TTATTGTTCGCGGCG BRADO1706 1821223 - 1821648 + | hypothetical protein BRADO1707 1821733 - 1823511 + | putative quinoprotein ethanol dehydrogenase TERM 1201 1823517 - 1823549 + F 100 -16.3 -4.14392 | opp_overlap 1823521, overlap 1823521 CTCGTTGTAAGCAGA TCAAGGAGCGGAGGC GTT GCCTCCGCTCCTTCC TTTTCCCCATTCGGC TERM 1202 1823521 - 1823545 + F 100 -21.5 -3.68023 | opp_overlap 1823521, overlap 1823517 TTGTAAGCAGATCAA GGAGCGGAGGC GTT GCCTCCGCTCC TTCCTTTTCCCCATT TERM 1203 1823545 - 1823521 - f 100 -21.5 -3.32647 | opp_overlap 1823521 1823517 TTGTAAGCAGATCAA GGAGCGGAGGC GTT GCCTCCGCTCC TTCCTTTTCCCCATT BRADO1708 1823609 - 1824106 + | putative cytochrome c region BRADO1709 1824103 - 1824735 + | hypothetical protein BRADO1710 1824866 - 1824961 + | coenzyme PQQ synthesis protein A (pyrroloquinoline quinone biosynthesis protein A) BRADO1711 1825209 - 1825640 + | putative isoquinoline 1-oxidoreductase alpha subunit, iorA-like BRADO1712 1825649 - 1827934 + | putative isoquinoline 1-oxidoreductase beta subunit, iorB-like TERM 1204 1827975 - 1827944 - f 81 -13.6 -3.61902 | opp_overlap 1827943 1827941 1827940, overlap 1827947 GCCTAGCACACACAA GCAGGGTGGGGCGG TCCG CCGCTCCACCCCTC CATGGTTCTATTCAG TERM 1205 1827972 - 1827947 - f 83 -16.1 -2.92712 | opp_overlap 1827943 1827941 1827940, overlap 1827944 TAGCACACACAAGCA GGGTGGGGCGG TCCG CCGCTCCACCC CTCCATGGTTCTATT BRADO1713 1828428 - 1829450 + | putative TRAP-type C4-dicarboxylate transport system, periplasmic component (dctP-like) TERM 1206 1831309 - 1831351 + G 85 -13.5 -4.15833 | CTGGCGCTGCTGATC GGCACGATCGTGA-TCGCGGC GGT GCCGTGGTTCTCGATCG-GCC TTTTGCACTGATCCT BRADO1714 1829479 - 1831362 + | TRAP-type C4-dicarboxylate transporter small and large permease BRADO1715 1831397 - 1832947 + | putative long-chain-fatty-acid--CoA ligase TERM 1207 1833591 - 1833611 + G 74 -15.4 -2.64735 | opp_overlap 1833579, overlap 1833576 1833610 CAAGCTTGCTCGGCG GCGCCGCC TCGCC GGCGGCGC TGGTCTGCATCGGCT BRADO1716 1832990 - 1833928 + | putative transporter (permease); putative malonate transporter TERM 1208 1834908 - 1834871 - g 71 -12.8 -3.29144 | gap 3, opp_overlap 1834874 1834875, overlap 1834872 CGAGCTGCGCGACAA CCGCCGCGGCGCGGCCGAG ATT CTCG-CCGCACC-CG-CGG AAACGCTCCGTGCGA TERM 1209 1835106 - 1835135 + G 71 -12.1 -3.32647 | opp_overlap 1835108 GACGCGATCGGCAAT GATGCCGTCGTCA TCAC TGACGGCGGCGAC TTCCTGTCCTTCGCC TERM 1210 1835366 - 1835330 - g 73 -13 -3.28712 | gap 1 CGCCGTCCGCCACAA GGCGCCGGTGCTGATCG TCGT CG-CCAACAACGGCGCC TGGCAGATCGAGGTA BRADO1717 1833954 - 1835666 + | putative acetolactate synthase (acetohydroxy-acid synthase) (ALS), TPP-requiring enzyme BRADO1718 1836987 - 1835680 - | major facilitator superfamily sugar transporter permease cyoA 1837138 - 1838313 + | cytochrome o ubiquinol oxidase subunit II (ubiquinol oxidase chain B) cyoB 1838324 - 1840333 + | cytochrome o ubiquinol oxidase, subunit I (ubiquinol oxidase chain A) cyoC 1840330 - 1840959 + | cytochrome o ubiquinol oxidase subunit III (ubiquinol oxidase chain C) cyoD 1840956 - 1841327 + | cytochrome o ubiquinol oxidase, subunit IV (ubiquinol oxidase chain D) TERM 1211 1841888 - 1841914 + G 74 -2.1 -4.7497 | overlap 1841863 1841887 GCAGCCATCGCGGCG GCGCGTGGCCT GTCCG ACGTCGCGCCC TTTTTCGTCGATGCC BRADO1723 1841327 - 1842163 + | putative SURF1 family protein TERM 1212 1843406 - 1843430 + G 73 -13.5 -3.23395 | opp_overlap 1843403 TCAGTCGAGCAAGGG CAGGCCCGGGC GCG GCCTCGGCCTG TTCCTGGTGGTCAAT regB 1842168 - 1843562 + | two-component sensor histidine kinase; putative photosynthetic apparatus regulatory protein regB (PrrB protein) regA 1843552 - 1844085 + | two-component response regulator; putative photosynthetic apparatus regulatory protein regA BRADO1726 1845372 - 1844098 - | hypothetical protein TERM 1213 1844895 - 1844917 + g 82 -15.6 -3.41527 | overlap 1844916 CGGCCTCCAGCCGCG CCTTGTCGCG GAC CGCGACGAGG TTCTCCTGCACCTTG TERM 1214 1845408 - 1845440 + r 82 -14.2 -3.29043 | opp_overlap 1845405, overlap 1845409 1845410 CATGCAATCTAACCG GCCG-CCGCGCGGTGT TTA AC-CTGCGCGGACGGC TTATCCCGAGCAATT BRADO1727 1848542 - 1845465 - | RND family mulitdrug efflux protein BRADO1728 1849615 - 1848539 - | RND family mulitdrug efflux protein TERM 1215 1848729 - 1848763 + g 71 -15 -2.54459 | overlap 1848719 1848728 AGCCAGACGAAGCTC TTGTCGTTCTCGGCGA GGA TCGCCGAGCGCGGCAG CTTGATGATGGTCTT BRADO1729 1850733 - 1849612 - | RND family mulitdrug efflux protein BRADO1730 1851052 - 1851687 + | TetR family transcriptional regulator BRADO1731 1852422 - 1851721 - | hypothetical protein BRADO1732 1852715 - 1852419 - | hypothetical protein TERM 1216 1853379 - 1853365 - R 76 -11.4 -3.727 | opp_overlap 1853364 1853351 GTCACCACAGGCAAA GCCGGT TCA ACCGGC ATTCCCTGCGCGATG TERM 1217 1853766 - 1853725 - R 73 -10.7 -3.53811 | overlap 1853692 CGTAGGGTGGGCAAA GCGGACGCCCGCAGGGC GGCGGCGT GCCCGCCGTGCATCCGC ATCGTCGGTGAGAAT BRADO1733 1855115 - 1853928 - | putative cytochrome c region BRADO1734 1855588 - 1855851 + | hypothetical protein TERM 1218 1855880 - 1855918 + T 81 -15.8 -3.04144 | ATCGTCACACGTGCT GCGCGGAGGACGCCGCGG CCG CAGCGTCGGCCTCCGCGG TCTTACCGCTGCCGA BRADO1735 1857266 - 1855869 - | purine permease TERM 1219 1856627 - 1856581 - G 70 -10.9 -3.53811 | overlap 1856582 1856624 GCGACCTTGTCGAAA TGCATCA-CGCCGAGCACGGTCG CGA CCACCGCGC-CGGCGATAATGCC GAGCAGCACCGAGAC BRADO1736 1860015 - 1857301 - | putative xanthine dehydrogenase family protein; putative hypoxanthine oxidase BRADO1737 1860845 - 1860012 - | putative oxidoreductase (FAD binding) TERM 1220 1862086 - 1862059 - g 76 -14.8 -3.14132 | gap 1 GCGCTGGGCGACGAA GGGCTCGGCCGCC TGT GTCGGCCG-GCCC GAGCTCGGCGTGATC BRADO1738 1860980 - 1862329 + | hydroxydechloroatrazine ethylaminohydrolase dppF 1863313 - 1862336 - | dipeptide transporter ATP-binding subunit dppD 1864344 - 1863310 - | peptide ABC transporter ATP-binding protein dppC 1865283 - 1864372 - | peptide ABC transporter permease dppB 1866290 - 1865280 - | peptide ABC transporter permease dppA 1868013 - 1866415 - | periplasmic dipeptide transport protein precursor (dipeptide-binding protein) (DBP) (ABC transporter) TERM 1221 1866466 - 1866442 - G 70 -10.8 -3.50393 | gap 1 GTCGACGCCATAGAA GCTGT-GCCGT CCGA ACGGCGACAGC TTGAAGTCGATCACG TERM 1222 1868281 - 1868238 - R 70 -11.6 -3.12351 | gap 1 GGGCTCCAGATCGAA GGTCGTCACCGTCACCCCCCC GCT AGGGGGGCGACGG-GACCTGC TGGCGGCTTGCCGCG BRADO1744 1869377 - 1868298 - | putative ABC transporter (substrate-binding protein) TERM 1223 1869453 - 1869413 - R 70 -12.7 -2.94337 | gap 1, overlap 1869410 CAGGGGAAAACACGA TGATCCCAAGCGTC-GCG CCCCAT CGCAGACGCTCGGGATGA AAGACTCAGCGATCC BRADO1745 1870373 - 1869459 - | ABC transporter permease BRADO1746 1871451 - 1870363 - | ABC transporter permease BRADO1747 1873003 - 1871435 - | putative ABC transporter ATP-binding protein BRADO1748 1873571 - 1874701 + | putative signal peptide TERM 1224 1874719 - 1874744 + T 100 -18.3 -4.67038 | opp_overlap 1874715 GATTGAGCACATCGA GGCGCCGCAGC TGAG GTTGCGGCGCC TTTTGATTTTGCGAG BRADO1749 1875182 - 1874763 - | putative cytidine and deoxycytidylate deaminase zinc-binding protein BRADO1750 1875397 - 1876356 + | putative cation-efflux pump BRADO1751 1876603 - 1876364 - | hypothetical protein BRADO1752 1877804 - 1876665 - | putative transport protein (permease) TERM 1225 1877027 - 1877002 - G 74 -15.5 -2.55351 | gap 1, overlap 1877001 CTGCCCCACAGCAAG GTGGCGCGG-TC GCC GATCCGCGCCAC GACGCGGTCGCCGAC TERM 1226 1877700 - 1877660 - G 74 -15.5 -2.64933 | gap 1, opp_overlap 1877663, overlap 1877664 CACCGAGCGACAGCA GCAACAGCCCGAGCGTCG CGTCAC CGACGC-CGAGCCGCTGC TTGGCGAACGGCACC dgoK 1878003 - 1878944 + | 2-dehydro-3-deoxygalactonokinase (2-keto-3-deoxy-galactonokinase) (2-oxo-3-deoxygalactonate kinase) dgoA 1878946 - 1879584 + | 2-dehydro-3-deoxy-6-phosphogalactonate aldolase TERM 1227 1879652 - 1879625 - f 83 -12.8 -3.95073 | gap 1 GTCGAGATCCAGAAA GGCGTGAACGCCT AGT AGGC-TCCACGCC GCTCTGCGCCTCGGA BRADO1755 1879899 - 1880261 + | transcriptional regulator MarR BRADO1757 1880692 - 1882152 + | hypothetical protein BRADO1758 1884808 - 1882154 - | putative fusion protein: FAD-binding monooxygenase (N-ter)/ alpha/beta-hydrolase (C-ter) TERM 1228 1882602 - 1882641 + g 82 -17 -3.01712 | opp_overlap 1882579 CCCCCGATCGCCGGC CCGCCGCGGTCGCGCGCC AACT GGCACGTGACGGCGGCGA TGTTGCCGCCCGCGC TERM 1229 1882990 - 1883006 + g 75 -11.5 -3.65046 | CTTCGCCGACGGGGC GGCCTGG CGG CCGGGCC TTGTTGAACTCAGCG TERM 1230 1885013 - 1884991 - H 71 -8.4 -3.89501 | overlap 1885001 CAAGATGCTGAGAAA GCGACAGAAA GCG CTCCTGCCGC GGCGCATTCACCAAG serA 1885096 - 1886343 + | D-3-phosphoglycerate dehydrogenase BRADO1762 1887173 - 1886751 - | molybdenum transport regulator BRADO1761 1886363 - 1886842 + | molybdenum ABC transporter ATP-binding protein BRADO1763 1887760 - 1887170 - | molybdenum ABC transporter ATP-binding protein BRADO1764 1888635 - 1887772 - | hypothetical protein TERM 1231 1888121 - 1888091 - G 77 -10.2 -3.93262 | TCGGAATAGATGAAA CGCTCGCGCCCGGC GCC GCCGAGATCGCGCG CCTTGCCGTCGGCGT modC 1889932 - 1888844 - | molybdenum ABC transporter ATP-binding protein modB 1890618 - 1889929 - | molybdenum ABC transporter permease protein modA 1891415 - 1890648 - | molybdenum ABC transporter (substrate-binding protein) bam 1893467 - 1891908 - | amidase TERM 1232 1893304 - 1893354 + g 100 -20.2 -3.18869 | overlap 1893306 GCCGACCATTGCCAG GCCGGCCCCTTCGGCAGCCGCGGC TTG GGCGCGGCTGTCGTCGGCGCCGTC TTAGGTGATTTCTTG TERM 1233 1893306 - 1893352 + g 100 -21.4 -3.14454 | overlap 1893304 CGACCATTGCCAGGC CGGCCCCTTCGGCAGCCGCGGC TTG GGCGCGGCTGTCGTCGGCGCCG TCTTAGGTGATTTCT BRADO1770 1894909 - 1893491 - | putative peptidase M20D, amidohydrolase; putative aminobenzoyl-glutamate utilization protein TERM 1234 1894604 - 1894639 + g 78 -15.4 -3.18264 | gap 1, opp_overlap 1894578 GCCATGGCCATGGCC GCCGGTCTCGACCGGGC GAT GCTCGG-CGACGCCGGC TTCCTGGCTGAGGCC BRADO1771 1895211 - 1895456 + | putative signal peptide BRADO1772 1895649 - 1895461 - | hypothetical protein BRADO1773 1895857 - 1895702 - | putative signal peptide TERM 1235 1895901 - 1895923 + H 86 -13.4 -3.85698 | overlap 1895903 GGTGTTGCCAATTCC TAGCGCGGCG CGA CGTCGCGCTG TTTGTGCACCGACAA TERM 1236 1895903 - 1895921 + H 79 -13.8 -3.51934 | overlap 1895901 TGTTGCCAATTCCTA GCGCGGCG CGA CGTCGCGC TGTTTGTGCACCGAC TERM 1237 1896484 - 1896505 + G 71 -15.1 -2.5805 | overlap 1896483 ATCGCGCCACGTCCA GCGGCGTCG AGAC CGGCGCCGC ATTCTGGCACATGAT norE 1895991 - 1896569 + | NorE protein involved in nitric oxide reduction (cytochrome c oxidase subunit III-like protein) BRADO1775 1896573 - 1896836 + | putative signal peptide norC 1896939 - 1897391 + | nitric-oxide reductase subunit C (nitric oxide reductase cytochrome c subunit) (NOR small subunit) norB 1897431 - 1898777 + | nitric-oxide reductase subunit B (nitric oxide reductase cytochrome b subunit) (NOR large subunit) TERM 1238 1898817 - 1898779 - f 78 -14.5 -3.05463 | gap 1, opp_overlap 1898774, overlap 1898741 AGCCGGCGGAGTGAA GGCCGACAGGCGGCGGCC CTGC GGTCGCCGCCTG-CATCC CCCGATGTTGGAGAG norQ 1898838 - 1899647 + | NorD protein required for nitric oxide reductase (Nor) activity (putative chaperone, ATPase) TERM 1239 1900151 - 1900171 + G 72 -13.9 -3.05935 | overlap 1900165 ACTCGCGCGGGCCCT CGCCGCGAC CCG GCCGCGGCG TTCGCTGCCGCGTCT TERM 1240 1901283 - 1901248 - g 75 -15.4 -2.78384 | gap 1, opp_overlap 1901260 1901263 1901275 GGCCCGGCTACTACA CGCGCATCGGCACGGCG GTG CGCCATGCCGCCG-GCG AGCTCGCCGCGCGTC norD 1899651 - 1901564 + | NorD protein required for nitric oxide reductase (Nor) activity BRADO1780 1902010 - 1901576 - | hypothetical protein BRADO1781 1902402 - 1902644 + | hypothetical protein TERM 1241 1902758 - 1902785 + F 80 -5.5 -4.72272 | overlap 1902756 CATGCGCCTCCGATG TGCGGCAGC GAGTGATGCA GCCGCCGCA TTTTTCATGGCGCCC BRADO1782 1902950 - 1903948 + | N-carbamoyl-D-amino acid hydrolase (D-N-alpha-carbamilase) TERM 1242 1904165 - 1904181 + F 75 -13.7 -3.05816 | opp_overlap 1904157 1904155 1904154, overlap 1904180 AGAACCACAGGTACG GGCCGGA GCA TCCGGCC TTCCCTGCGCGATGG BRADO1785 1904925 - 1905086 + | hypothetical protein upp 1905984 - 1905355 - | uracil phosphoribosyltransferase TERM 1243 1906024 - 1906012 - R 70 -10.5 -3.53811 | opp_overlap 1905999 1906019 CGTAGGGTGGGCAAA GGCGC GAC GCGCC GTGCCCACCGCGATC TERM 1244 1906145 - 1906122 - R 84 -16 -3.09635 | gap 1, overlap 1906136 ATTTCGAGGAGCCAA CGGGTCCGCGC AAA GCGCGG-CCCG ATGACAAGCTCCGCG BRADO1787 1907478 - 1906255 - | hypothetical protein BRADO1788 1908751 - 1907495 - | hypothetical protein TERM 1245 1909512 - 1909548 + G 72 -11.5 -3.53444 | gap 1, overlap 1909514 TGCTGATCGAGGGTC TCCGCCGCGGCGCGCG TACCAT CG-GCGCCGCGCCGTA TTTCGACACCGATCC TERM 1246 1909514 - 1909546 + G 75 -14.1 -3.34517 | gap 1, overlap 1909512 CTGATCGAGGGTCTC CGCCGCGGCGCGCG TACCAT CG-GCGCCGCGCCG TATTTCGACACCGAT BRADO1789 1908908 - 1910236 + | putative N-isopropylammelide isopropylaminohydrolase BRADO1790 1910427 - 1911353 + | N-carbamoyl-D-amino acid hydrolase (D-N-alpha-carbamilase) BRADO1791 1912215 - 1911577 - | putative Hydantoin racemase HyuA hyuA 1912364 - 1913833 + | dihydropyrimidinase TERM 1247 1914599 - 1914629 + G 70 -11.1 -3.61398 | gap 1 GCCGCAGGCGCTGAT CG-CGGCCTGCTGC GCGC GCAGCGAGCCGGCG TTGTTGAACGAAGCC BRADO1793 1914006 - 1914977 + | putative UDP-glucose 4-epimerase BRADO1794 1914979 - 1915740 + | short chain dehydrogenase BRADO1795 1916789 - 1915893 - | LysR family transcriptional regulator TERM 1248 1916029 - 1915993 - G 75 -9.4 -4.15044 | gap 2, opp_overlap 1915995, overlap 1915995 CGCGGCGTCAACAAA TACGCCCGCATCGGCGTC TTC GGCGC-GA-GCGGGCGTG CCGCGAGGTCGGGCC TERM 1249 1916027 - 1915995 - G 75 -12 -3.6761 | gap 2, opp_overlap 1915995, overlap 1915993 CGGCGTCAACAAATA CGCCCGCATCGGCGTC TTC GGCGC-GA-GCGGGCG TGCCGCGAGGTCGGG BRADO1796 1916979 - 1918415 + | oxidoreductase BRADO1797 1918506 - 1920125 + | putative ABC transporter substrate-binding protein TERM 1250 1920136 - 1920170 + F 82 -14.2 -3.27923 | AGTAGGGCCGTCGCC GGTGGAGTGCAGCCGC GTA GCGGTGGCGCTGCACC TTGCTGCTGTTCGGA TERM 1251 1920376 - 1920353 - f 91 -18.2 -3.19192 | TTCGATGCAATCCAA CCTCTCCCCG CAGG CGGGGAGAGG TGATACCGAGCCGCA TERM 1252 1920549 - 1920567 + G 70 -11.6 -3.40611 | overlap 1920547 CTGCTGATGCGCGTG CTGCCGGG CGA CCCGGCCG TGTTCTTCGCCTCCG BRADO1798 1920444 - 1921475 + | oligopeptide ABC transporter membrane protein BRADO1799 1921478 - 1922338 + | peptide ABC transporter membrane protein TERM 1253 1922655 - 1922618 - g 85 -17.6 -2.66435 | opp_overlap 1922622 1922624, overlap 1922615 AGGGCCAGGACATCA CCCGCGCCGGCGGCGC CGATCT GCGCAGCCTGCACGGG GCTGCGATGTCGATG TERM 1254 1923311 - 1923323 + G 73 -9.1 -3.92075 | TCGACGACGGCACCA TCGGC GTC GCCGA TTTCTCGATGACCAT BRADO1800 1922398 - 1924047 + | oligopeptide ABC transporter ATP-binding protein BRADO1801 1924169 - 1925584 + | putative D-lactate dehydrogenase BRADO1802 1926976 - 1925600 - | hypothetical protein uxuA 1927315 - 1928511 + | mannonate hydrolase idnD 1928564 - 1929595 + | L-idonate 5-dehydrogenase, NAD-binding TERM 1255 1930106 - 1930143 + G 77 -13.4 -3.54741 | gap 1, opp_overlap 1930101 ACGGCAACTACCGGC CGCGCGGCTGGGCCAGC CGCGA GATGGCGCAGC-GCGCG TTTCGCGCCATCATG kdgK 1929643 - 1930539 + | ketodeoxygluconokinase eda 1930536 - 1931180 + | KHG/KDPG aldolase ytfQ 1931486 - 1932409 + | ABC transporter periplasmic-binding protein ytfQ precursor TERM 1256 1933526 - 1933552 + G 82 -17.2 -3.01712 | CCGGCCTGCTCGGCT CCGGCCGCACCG AGA CGGCGCGGCTGG TGTTCGGCGCCGAGC BRADO1808 1932619 - 1934169 + | putative ABC transporter ATP-binding protein TERM 1257 1935079 - 1935115 + G 86 -18 -2.89742 | gap 1 AGGCCGTCGTCGTGC TCGCCGTGCTGCTGGCG CAGT CGCC-GCGGCTCGGCGA TCTCTCGCGCTTCAC ytfT 1934166 - 1935158 + | sugar ABC transporter membrane protein BRADO1810 1935155 - 1936165 + | inner membrane ABC transporter permease protein YjfF BRADO1811 1936162 - 1936905 + | GntR family transcriptional regulator BRADO1812 1936965 - 1938638 + | dihydroxy-acid dehydratase BRADO1813 1938642 - 1939577 + | dihydrodipicolinate synthase BRADO1814 1939581 - 1940507 + | galactose 1-dehydrogenase BRADO1815 1940511 - 1941590 + | galactose mutarotase BRADO1816 1941590 - 1942471 + | putative gluconolactonase chvE 1942580 - 1943650 + | multiple sugar-binding periplasmic receptor chvE precursor TERM 1258 1943702 - 1943670 - f 95 -19.9 -3.37493 | opp_overlap 1943673, overlap 1943673 GGCCTAAGAGACGAA CAACCCTCTCCCCGG TTT CCGGGGAGGGGGTTA TCTTGTCGCGCGGCG TERM 1259 1943673 - 1943699 + F 100 -21.6 -3.7511 | opp_overlap 1943670 1943673 CTAAGAGACGAACAA CCCTCTCCCCGG TTT CCGGGGAGGGGG TTATCTTGTCGCGCG TERM 1260 1943699 - 1943673 - f 100 -19.4 -3.82205 | opp_overlap 1943673, overlap 1943670 CTAAGAGACGAACAA CCCTCTCCCCGG TTT CCGGGGAGGGGG TTATCTTGTCGCGCG araG 1943742 - 1945319 + | L-arabinose transport ATP-binding protein araG TERM 1261 1945326 - 1945309 - f 74 -14.1 -2.87136 | TTACGAACCAGGAGA CGGCCGC CTAA GCGGCCG GGAGGACACCAGCCA TERM 1262 1945605 - 1945649 + G 72 -11.4 -3.60296 | gap 1 TCGGTCGCGGGCTTC GTCGGCGCGGTCGCG-GCCGT GCTG ATGGTGCGCTACCACGTCGAC TTTCCGCTCGCCATC BRADO1819 1945341 - 1946531 + | putative L-arabinose transport system permease protein araH BRADO1820 1947128 - 1947448 + | putative anti-sigma factor antagonist cheY 1947450 - 1947815 + | chemotaxis protein cheY TERM 1263 1948352 - 1948324 - g 71 -9.5 -3.88787 | GGAGATGCTGAGAAA GGCGAATGAGCCG CTG CTGCTGATCCGCC AGCTTCGCAAGCTCG cheA 1947806 - 1949860 + | chemotaxis protein cheA cheW 1949850 - 1950380 + | chemotaxis protein cheW BRADO1824 1950439 - 1952802 + | methyl-accepting chemotaxis protein cheR 1952861 - 1953685 + | chemotaxis protein methyltransferase cheD 1953682 - 1954323 + | chemotaxis protein cheD TERM 1264 1954622 - 1954597 - g 80 -14.7 -3.35679 | opp_overlap 1954616 GTCGCTCACCCAGAA GGGCGCGGACA CTGC CATCCGCGCCC TGGAGATGGGCGCGT cheB 1954334 - 1955392 + | chemotaxis response regulator protein CheB-glutamate methylesterase BRADO1828 1955630 - 1956520 + | hypothetical protein BRADO1829 1956530 - 1956829 + | putative anti-sigma factor antagonist BRADO1830 1956836 - 1957471 + | hypothetical protein BRADO1831 1957516 - 1958757 + | putative response regulator, putative serine phosphatase BRADO1832 1958777 - 1959115 + | hypothetical protein TERM 1265 1959187 - 1959137 - g 81 -14.6 -3.56643 | gap 2, overlap 1959118 1959147 CCGACACCGGCGAAA CCGGAGGACAGCCGTCCGCCTGCC TCGAC GGC-GGCCGGCGGCCGGCC-CCGG CTGCGGCCGAGCCGC TERM 1266 1959182 - 1959147 - g 82 -17.4 -2.81966 | overlap 1959118 1959137 CGAAACCGGAGGACA GCCGTCCGCCTGCCTC GACG GCGGCCGGCGGCCGGC CCCGGCTGCGGCCGA TERM 1267 1960274 - 1960239 - g 70 -11.9 -3.44051 | TCTCGAGGAGCAGAA GCGCG-AGCTCGAGGCC ACGG GGGC-CGAGCTGCGCGC CGCGCGCGACGCCGC BRADO1833 1959112 - 1961475 + | hypothetical protein BRADO1834 1961758 - 1963179 + | hypothetical protein BRADO1835 1963194 - 1963346 + | hypothetical protein BRADO1836 1965099 - 1963483 - | putative thiosulfate sulfurtransferase BRADO1837 1965646 - 1965059 - | hypothetical protein BRADO1839 1966467 - 1965949 - | hypothetical protein BRADO1840 1966841 - 1966470 - | hypothetical protein BRADO1841 1967452 - 1967009 - | hypothetical protein TERM 1268 1967504 - 1967486 - H 100 -11.8 -4.56597 | CGGCGTCCGCAAAAA CTTGCAAG CTT CTTGCAAG ACCCTGTCGAGATGA TERM 1269 1967852 - 1967830 - g 71 -12.7 -3.32268 | overlap 1967821 CAAGGAGGCCGACAA GGCCGCCGA GCCGG TCAGCGGCC CGCCCATCCACCAGG TERM 1270 1968263 - 1968307 + G 87 -14.9 -3.81287 | opp_overlap 1968272, overlap 1968264 GAGATCTTCGACGCC TGCGACGAAGGCGGCGACCGC GCC GCGCTCGGCGGCTTCCTCGCG TTTCCTCCTGATCTA TERM 1271 1968264 - 1968306 + G 79 -16.2 -2.8829 | opp_overlap 1968272, overlap 1968263 AGATCTTCGACGCCT GCGACGAAGGCGGCGACCGC GCC GCGCTCGGCGGCTTCCTCGC GTTTCCTCCTGATCT BRADO1842 1967633 - 1969159 + | putative amine oxidase BRADO1843 1969221 - 1970903 + | ATPase BRADO1844 1971553 - 1970909 - | putative glutathione S-transferase BRADO1845 1971746 - 1972195 + | hypothetical protein BRADO1846 1972757 - 1972518 - | hypothetical protein BRADO1847 1973096 - 1972779 - | hypothetical protein BRADO1848 1973830 - 1973093 - | rhodanese-like domain-/ankyrin repeat-containing thiosulfate sulfurtransferase BRADO1849 1975539 - 1973896 - | putative oxidoreductase BRADO1850 1976007 - 1975804 - | hypothetical protein vanB 1976974 - 1976012 - | vanillate O-demethylase oxidoreductase TERM 1272 1976074 - 1976098 + g 71 -9.1 -3.88291 | opp_overlap 1976069 1976067 GCAGGAAATAGCCCT CGGCGCGCTGC GCG GCGGAGAGCCG TTTGTCGCGGTGATC TERM 1273 1977749 - 1977795 + G 71 -9.4 -3.78934 | gap 3, overlap 1977748 1977747 1977749 CACGGTCCAGGATTG C-GCGCGCGCCCCGCGGC-GAGC ACGC GTTCTGGCGCGAGGCG-GCGCAG TTCTTCTGCGCGCAG BRADO1852 1977229 - 1978392 + | hypothetical protein TERM 1274 1978431 - 1978377 - T 80 -14.3 -3.14132 | gap 2, opp_overlap 1978377, overlap 1978390 GGCGCGCGGGATCAA CTTGCCGGAGACATGACCCGCGTCGCC GCC GGCGGCGCGGGTCATG-CG-CGTGAAG GTCTTGCGCGTGCGG TERM 1275 1978377 - 1978432 + T 84 -16.8 -3.04144 | gap 1, opp_overlap 1978377 1978390 GGCGCGCGGGATCAA CTTGCCGGAGACATGACCCGCGTCGCC GCC GGCGGCGCGGGTCATG-CGCGTGAAGG TCTTGCGCGTGCGGC TERM 1276 1978420 - 1978390 - T 100 -22.6 -2.87463 | opp_overlap 1978377, overlap 1978377 AACTTGCCGGAGACA TGACCCGCGTCGCC GCC GGCGGCGCGGGTCA TGCGCGTGAAGGTCT ligB 1979730 - 1978450 - | protocatechuate 4,5-dioxygenase TERM 1277 1978622 - 1978651 + g 70 -10 -3.7282 | gap 1, opp_overlap 1978615 1978616, overlap 1978622 ACGAAGAAGCTGACG CC-GCGCCGGATC ATCTC GATCCAGCGCCGG TTCTTGATCAGGTCA TERM 1278 1980143 - 1980172 + G 78 -9.9 -4.08064 | gap 1 GTCGGCGTGCCCAGC GGCCGGCTGTCGGT AGC GCTGCC-GCCGGCC TTTTGCGAGGAGATT BRADO1854 1979867 - 1980772 + | LysR family transcriptional regulator BRADO1855 1981084 - 1980791 - | putative dimeric alpha+beta barrel BRADO1856 1982032 - 1981100 - | LysR family transcriptional regulator BRADO1857 1982215 - 1982775 + | cysteine hydrolase domain-containing protein BRADO1858 1982902 - 1983621 + | putative methyltransferase BRADO1859 1984130 - 1983651 - | putative methyltransferase TERM 1279 1984247 - 1984232 - H 70 -11.8 -3.21747 | TGATCCGAGGACGAA GCCCGC CGCG GCGGGC CGACATGGAGATTGT BRADO1860 1984383 - 1985396 + | hypothetical protein TERM 1280 1985561 - 1985514 - g 82 -16.9 -3.01712 | gap 2 CGGCGCCGCGCAAGA CCGC-GCCGCCGGCGGCG-CGTC CGGC GCCGTCTCCGCCGGCGCCGGCGG TTCCCGACGATCTGA BRADO1861 1985459 - 1986085 + | hypothetical protein BRADO1862 1988736 - 1986115 - | transcriptional regulator TERM 1281 1986321 - 1986292 - G 75 -14.3 -3.27022 | gap 1 GCCACGGCAGATGAA CGGCTGCGTCCCGC TCG GCGGCAC-CAGCCG CGAGTGATACGAGAC TERM 1282 1987128 - 1987173 + g 76 -14.7 -3.16191 | gap 1, opp_overlap 1987127 1987128 CTTGGCGGGCGAAAC TCGGCGTCGACATTGCCCGAGG CTC CCTCGGGCGGCGTAGA-GCCGG TTGCTGGCGATGTCG BRADO1863 1989137 - 1990417 + | putative urea short-chain amide or branched-chain amino acid uptake ABC transporter periplasmic solute-binding protein precursor BRADO1864 1990813 - 1990526 - | hypothetical protein BRADO1865 1990740 - 1991165 + | putative recombinase BRADO1866 1991614 - 1992222 + | hypothetical protein TERM 1283 1993088 - 1993125 + G 71 -12.7 -3.28712 | gap 1 GCGAGCGCACCGCGA CGGTGACGCGCTGGATGC GCG GCATCGAGC-CGCCGCCG TTCTGGGCCAAGCAG TERM 1284 1993560 - 1993541 - g 70 -10.7 -3.53444 | TGATCGCGCGTGAAA CGCCGCT GCGCGA AGCGGCG GAGTGAATCGAATGG BRADO1867 1992523 - 1993566 + | vanillate O-demethylase oxygenase, iron-sulfur subunit (modular protein=subunit from monooxygenase) (vanA-like) TERM 1285 1993868 - 1993884 + G 73 -10.8 -3.64703 | opp_overlap 1993851 CCTGGCGGCGCGGCT CGCCGC CGAGC GCGGCG TTTCCGTGCGCGACA vanR 1993563 - 1994327 + | GntR family transcriptional regulator BRADO1869 1994339 - 1995319 + | putative oxydoreductase BRADO1870 1995992 - 1995342 - | hypothetical protein TERM 1286 1995755 - 1995779 + g 77 -12.1 -3.67597 | overlap 1995710 CCGGCGGTTGAAGCG GCTGCGTTGCC ACG GGTGGCGCAGC TTGTTGGATGGGAGG BRADO1871 1997163 - 1996129 - | putative 5-methyltetrahydropteroyltriglutamate-homocysteine methyltransferase (cobalamin-independent methionine synthase) TERM 1287 1996730 - 1996703 - G 78 -9.8 -4.04206 | opp_overlap 1996711 TCATCGTGATAGAAA TCATCCTGCGCC TGCT GGCTCAGGGTGA ATGGGCCCGGCAGCG tdcD 1997339 - 1998526 + | propionate kinase/acetate kinase C, anaerobic TERM 1288 1999225 - 1999251 + G 73 -15.1 -2.87132 | opp_overlap 1999214, overlap 1999230 ACCACGACCCGACGC GGGCGCCGCGC CAGCA GCGCGGTGTCC TATCTGCGACCGGCG betA 1998625 - 2000250 + | choline dehydrogenase, a flavoprotein; alcohol dehydrogenase TERM 1289 2001202 - 2001239 + G 76 -14.8 -3.10894 | gap 1 CTCGAATTGCTCGCC AGCGGCGCGGCCGCGCT GATCG AGCGCAGCCG-GCCGCG TTAGGTCATCATCCT hemC 2000266 - 2001243 + | porphobilinogen deaminase hemE 2002279 - 2001248 - | uroporphyrinogen decarboxylase TERM 1290 2002361 - 2002342 - H 74 -13.6 -2.87211 | ACCGTCCGTGATACA TGGCCGGA CGGT TCCGGCCA AGCTCCCATCCGACT BRADO1876 2002471 - 2002719 + | hypothetical protein BRADO1877 2002875 - 2004785 + | putative signal peptide BRADO1878 2005026 - 2004799 - | hypothetical protein BRADO1879 2005792 - 2005013 - | putative sulfurtransferase BRADO1880 2005986 - 2005801 - | hypothetical protein TERM 1291 2006078 - 2006020 - gH 100 -23.7 -2.52464 | gap 1 GCTGGCCGGAATCGA GGTGCTGCGCGCCGGCGG-CACCGCGGC CGAC GCGGCGGTGGCCGCCTGCGCGCTGCTCG GCGTGATCGAGCCGC BRADO1881 2005862 - 2007511 + | putative gamma-glutamyltranspeptidase TERM 1292 2007814 - 2007840 + FH 91 -17.2 -3.28712 | GGGTCCCGGATCGGC GCCGTGCCGCGC TGC GCGCGTCGCGGC TTGTCGGGACGAGGG fbp 2008643 - 2008990 + | peptidylprolyl isomerase TERM 1293 2009100 - 2009047 - T 100 -27.5 -3.33696 | gap 1, opp_overlap 2009099, overlap 2009048 CGCGGTGCCAATGAA TGCGCCCTCTCCCACCCTGGCGAAGC TCC GCTTCGCCTTGG-GGGAGAGGGCGCT GCATCTGGCAGTTGA TERM 1294 2009099 - 2009048 - T 100 -31 -2.60075 | gap 1, overlap 2009047 GCGGTGCCAATGAAT GCGCCCTCTCCCACCCTGGCGAAGC TCC GCTTCGCCTTGG-GGGAGAGGGCGC TGCATCTGGCAGTTG TERM 1295 2009330 - 2009359 + T 86 -17.9 -2.63631 | opp_overlap 2009334, overlap 2009334 CAGCTAACATGCGAG CAAAGCCGGCTCC GCGA GGAGCCGGCTTCG TGATCTCGGGGTTGC TERM 1296 2009334 - 2009355 + T 89 -17.3 -3.24747 | opp_overlap 2009334, overlap 2009330 TAACATGCGAGCAAA GCCGGCTCC GCGA GGAGCCGGC TTCGTGATCTCGGGG TERM 1297 2009355 - 2009334 - T 100 -17.3 -3.76379 | opp_overlap 2009330 2009334 TAACATGCGAGCAAA GCCGGCTCC GCGA GGAGCCGGC TTCGTGATCTCGGGG BRADO1885 2009615 - 2009412 - | hypothetical protein BRADO1886 2009774 - 2010292 + | hypothetical protein BRADO1888 2012060 - 2010834 - | hypothetical protein TERM 1298 2011428 - 2011446 + g 75 -11.6 -3.75738 | GCAACTGGTTTCGGC CGGCGGGG TGA CGCCGCCG TTCTTGATGATCGTC BRADO1889 2013795 - 2012320 - | hypothetical protein BRADO1890 2014100 - 2013927 - | hypothetical protein BRADO1891 2014146 - 2015519 + | hypothetical protein TERM 1299 2016123 - 2016100 - g 75 -13.8 -3.21726 | opp_overlap 2016121, overlap 2016093 GCTCAGAAGATGGAA GCCGTCGGTC AGCT GACCGGCGGC GTGGCGCATGACTTC BRADO1892 2015632 - 2017230 + | sensor histidine kinase TERM 1300 2017331 - 2017286 - T 100 -17.8 -4.26076 | gap 2, opp_overlap 2017285 2017324, overlap 2017252 2017288 TCATGCGCACGAAAA CAGTCGGATCATGATGCGCTGC CGTG GCGGCGCATCATGA-CCGAC-G CCTACTTCGAAGCCG TERM 1301 2017330 - 2017288 - T 100 -21.5 -3.7331 | gap 1, opp_overlap 2017285 2017324, overlap 2017252 2017286 ATGCGCACGAAAACA GTCGGATCATGATGCGCTGC CGTG GCGGCGCATCATGA-CCGAC GCCTACTTCGAAGCC BRADO1893 2017929 - 2017333 - | putative outer membrane protein TERM 1302 2017722 - 2017748 + g 76 -15.1 -3.09492 | GTTCCGCGATTTGCT CGCGCTCGCCG AGCGA CAGCGAGCGCG TCTTGCGGTTCCGGA BRADO1894 2018362 - 2018592 + | hypothetical protein BRADO1895 2018620 - 2019831 + | hypothetical protein BRADO1896 2019957 - 2020514 + | TetR family transcriptional regulator BRADO1897 2020564 - 2021526 + | putative hydrolase BRADO1899 2022182 - 2021769 - | hypothetical protein TERM 1303 2022981 - 2023004 + G 72 -5.2 -4.41616 | gap 1 CTACGCGCTGCGCTT CCTG-CTCGGT GTC GCCGAGGCCGG TTTCTTTCCCGGCAT TERM 1304 2023329 - 2023281 - g 82 -16 -3.46602 | gap 1, overlap 2023326 CGCGCCAGAGCAGAA GGCCTGGCTCGCCGCCAAGCTCG AGGC CGAGACCG-CGGCGAAGCAGGCC GCGGGACACATGACG BRADO1900 2022613 - 2023944 + | MFS family tartrate transporter BRADO1901 2024218 - 2025381 + | putative component of multidrug efflux system; putative signal peptide TERM 1305 2025526 - 2025508 - f 74 -13.1 -3.29511 | overlap 2025519 CTCATGGTTCGAGAA GCGCCGC AAGAG GCGGCGC TCCTCACCATGAGGG TERM 1306 2025658 - 2025613 - f 84 -10.7 -4.12254 | gap 3, overlap 2025588 2025616 CATGACGAGAAATAA GACCCTCATCCCGAGCGAGACG CGAAC CGTCTCGC--AGGATGAGG-TC ACCGAAGCCTGAAGC TERM 1307 2025656 - 2025616 - f 72 -13.5 -2.78206 | gap 2, overlap 2025588 2025613 GACGAGAAATAAGAC CCTCATCCCGAGCGAGACG CGAAC CGTCTCGC--AGGATGAGG TCACCGAAGCCTGAA BRADO1902 2025701 - 2028841 + | RND efflux transporter BRADO1903 2028863 - 2029474 + | TetR family transcriptional regulator TERM 1308 2029562 - 2029552 - f 78 -6.8 -4.63218 | opp_overlap 2029552 CTCTCTCGAACAAAA TGGC TCC GCCA TTTTGTCGCGCGAGG TERM 1309 2029552 - 2029562 + F 73 -6.8 -4.36914 | opp_overlap 2029552 CTCTCTCGAACAAAA TGGC TCC GCCA TTTTGTCGCGCGAGG BRADO1904 2029613 - 2030236 + | putative flavoprotein yciA 2030285 - 2030704 + | Acyl-CoA thioester hydrolase BRADO1906 2030952 - 2031143 + | hypothetical protein glpR 2031294 - 2032127 + | glycerol-3-phosphate regulon repressor TERM 1310 2032367 - 2032377 + G 86 -6.8 -4.96848 | CGATGCGGCCGGACG CGGA AAT TCCG TTTTTCTCTGCGAAA TERM 1311 2033610 - 2033632 + G 70 -6.3 -4.25848 | gap 1 CTCGCGGGTGCGACA TCTTCGGCCG ATCT CGGCC-AGGA TTTTGGTGGCACCTT glpD 2032290 - 2033834 + | glycerol-3-phosphate dehydrogenase TERM 1312 2034231 - 2034285 + G 86 -17.7 -2.83715 | gap 1 CGCCGCTGCAGCTTT CCGGCGGCCAGCAGCAGCGCACCGCG ATCG CGCGG-GCGCTGGTGAAGGGCGCCGA TCTCGTGCTGCTCGA BRADO1909 2033831 - 2034931 + | putative ATP-binding protein of sugar ABC transporter BRADO1910 2034945 - 2036027 + | putative ATP-binding protein of sugar ABC transporter TERM 1313 2036914 - 2036894 - g 75 -13.9 -3.23692 | overlap 2036895 CACTATCATGACCAA TGCCGGCGC CGA GCGCCGGCC GGTGGAAGGGGGCGC TERM 1314 2036913 - 2036895 - g 80 -17.4 -2.53894 | overlap 2036894 ACTATCATGACCAAT GCCGGCGC CGA GCGCCGGC CGGTGGAAGGGGGCG BRADO1911 2036028 - 2036933 + | putative ABC transporter permease protein BRADO1912 2036933 - 2037739 + | putative sugar ABC transport system, permease component TERM 1315 2037773 - 2037794 + F 79 -13.7 -3.50869 | GCAGCTCCCGCTCCA CCTCTCCCG CTTG CGGGGGAGG TTGTATCGCATCGTC TERM 1316 2038183 - 2038215 + G 91 -16.3 -3.76952 | opp_overlap 2038179 TCGGCGAGGAAGGGT TTGAGGTCTCGAGCC TGT GGCTCGCGACCGCAA TTTCGCTTGCGTCAG BRADO1913 2037927 - 2038256 + | hypothetical protein TERM 1317 2038524 - 2038508 - g 71 -12.3 -3.23853 | opp_overlap 2038506, overlap 2038506 2038520 CTTGTCGAAGGAAGA GCAGCTC AAG GAGCTGC AATGGTTCGCCAAGG BRADO1914 2038383 - 2040125 + | putative periplasmic binding ABC transporter protein, sugar binding precursor; putative signal peptide TERM 1318 2040164 - 2040138 - f 77 -13.6 -3.29461 | opp_overlap 2040136, overlap 2040139 2040141 TAAGCGGTTTCACAA TGATCGCCCGGC TCG GCCGGGCGGTCC CCTCCTTGAGGCCGG TERM 1319 2040163 - 2040139 - f 83 -17.1 -2.57463 | opp_overlap 2040136, overlap 2040138 2040141 AAGCGGTTTCACAAT GATCGCCCGGC TCG GCCGGGCGGTC CCCTCCTTGAGGCCG TERM 1320 2040161 - 2040141 - f 72 -13.9 -2.82623 | opp_overlap 2040136, overlap 2040139 2040138 GCGGTTTCACAATGA TCGCCCGGC TCG GCCGGGCGG TCCCCTCCTTGAGGC TERM 1321 2040174 - 2040193 + F 100 -15 -5.18371 | CGGTCCCCTCCTTGA GGCCGGGA GCAA TCCCGGCC TTTTCTTTTGTGGCA exbB 2040417 - 2041232 + | biopolymer transport protein ExbB; uptake of enterobactin, tonB-dependent uptake of B colicins exbD 2041236 - 2041661 + | uptake of enterobactin; tonB-dependent uptake of B colicins TERM 1322 2042243 - 2042203 - g 73 -13.2 -3.26947 | gap 1, overlap 2042185 2042191 GAAGGCCGAGAGGAA GCCTCCGCCGCCGAAGCCG GTTG CGGCTCCGGCGA-GCCGGC CTTCGCGTGTCGCGC tonB 2041658 - 2042581 + | energy transducer TonB, C-terminal region BRADO1919 2042914 - 2042609 - | hypothetical protein TERM 1323 2042681 - 2042701 + g 72 -4.6 -4.57341 | gap 1 GAGCTCGATGTTCTT GGC-GACGC AGGT GCGGCCGCC TTTTTCCGACAGCTT BRADO1920 2043889 - 2042999 - | hypothetical protein TERM 1324 2044894 - 2044860 - g 86 -17.8 -2.83271 | opp_overlap 2044886, overlap 2044857 CGATCCCGACAAGGA CGGCACCGCCGACCTC AGC GAGGTCCGCGCCGCCG CGGGCGCGCTGTTCG BRADO1923 2044774 - 2045130 + | putative calcium-binding protein TERM 1325 2045193 - 2045166 - T 90 -18.4 -2.87344 | opp_overlap 2045166, overlap 2045131 GATCCGGCCGACAGA GGCCCGCGGCGA GAGA TCGCTGCGGGCC TTTCGGTTTGAAGGA TERM 1326 2045166 - 2045193 + T 100 -20.6 -3.84451 | opp_overlap 2045131 2045166 GATCCGGCCGACAGA GGCCCGCGGCGA GAGA TCGCTGCGGGCC TTTCGGTTTGAAGGA BRADO1924 2045889 - 2045254 - | two-component LuxR family response regulator BRADO1925 2046198 - 2048582 + | hypothetical protein TERM 1327 2048615 - 2048597 - T 78 -11.6 -3.74872 | AGCCAGCCGATCAAA GGCGCGTC GGC GCCGCGCC ACGGAAAGCCCCCGC TERM 1328 2048642 - 2048661 + T 89 -15 -3.93383 | opp_overlap 2048624 2048642 CCGCCGTGGCAAGAA GGCCGGGA GAAA TCCCGGCC TTTCGTCTGTCTTCC TERM 1329 2048661 - 2048642 - T 85 -15 -3.61398 | opp_overlap 2048642, overlap 2048624 CCGCCGTGGCAAGAA GGCCGGGA GAAA TCCCGGCC TTTCGTCTGTCTTCC TERM 1330 2048808 - 2048827 + T 70 -10.6 -3.53811 | opp_overlap 2048809, overlap 2048809 ATGCATGGTGGACAC ACGCCGCC TGGC GGCGGCGC TTTGCCCACCCTACG TERM 1331 2048809 - 2048826 + T 72 -14.1 -2.72144 | opp_overlap 2048809, overlap 2048808 TGCATGGTGGACACA CGCCGCC TGGC GGCGGCG CTTTGCCCACCCTAC TERM 1332 2048826 - 2048809 - T 74 -14.1 -2.87931 | opp_overlap 2048809 2048808 TGCATGGTGGACACA CGCCGCC TGGC GGCGGCG CTTTGCCCACCCTAC nemA 2049943 - 2048846 - | N-ethylmaleimide reductase, FMN-linked TERM 1333 2050206 - 2050191 - H 81 -4 -5.0133 | gap 1, overlap 2050194 GACGCTTTGAAAAAA CAATGCG GAC CGCAT-G ACGGCCGCAGGGGAG TERM 1334 2050215 - 2050194 - H 86 -8.7 -4.61482 | gap 1, overlap 2050191 GCTTTGAAAAAACAA TGCGGACCGC ATG ACGG-CCGCA GGGGAGGGTGAATCC BRADO1927 2050231 - 2051256 + | putative ribose periplasmic binding protein BRADO1928 2051296 - 2052765 + | putative ribose transport ATP-binding protein (rbsA) TERM 1335 2053388 - 2053412 + G 86 -17.9 -3.01712 | GGCGGCAACGCGGTG GCGATCAGCCG GGC CGGCTGGTCGC TGTTGAAGGCCAAGA BRADO1929 2052770 - 2053753 + | putative ribose ABC transporter, permease BRADO1930 2053740 - 2054717 + | putative ribose ABC transporter, permease BRADO1931 2055515 - 2055033 - | hypothetical protein BRADO1933 2056567 - 2055800 - | putative short chain dehydrogenase BRADO1934 2056900 - 2056670 - | hypothetical protein BRADO1935 2058166 - 2056928 - | hypothetical protein TERM 1336 2057316 - 2057294 - G 79 -6.8 -4.62069 | GGCGTAGGCCAAAAA CGCCGGGCCG TTA CGCCCCATCG GCAGCAGCACCGAGG TERM 1337 2058460 - 2058435 - R 100 -16.1 -4.7373 | GCAGCGCATCAAAAA GCCCGCGTGGT GCTG ACCGCGCGGGC GAGGCAGGCGACTTC BRADO1936 2058680 - 2058483 - | hypothetical protein pgm 2060486 - 2058846 - | phosphoglucomutase BRADO1938 2061089 - 2060643 - | hypothetical protein TERM 1338 2061738 - 2061723 - g 74 -10.4 -3.86194 | overlap 2061710 2061734 AAGCCCGTTGAGAAA CCGGCT GAAA AGCCGG CGGAGAAGCCGCAGC BRADO1939 2061420 - 2062334 + | hypothetical protein BRADO1940 2062896 - 2062357 - | hypothetical protein fdh 2064086 - 2062911 - | S-(hydroxymethyl)glutathione dehydrogenase (glutathione-dependent formaldehyde dehydrogenase) (fdh) BRADO1942 2064635 - 2064186 - | hypothetical protein BRADO1943 2065251 - 2064871 - | hypothetical protein BRADO1945 2065575 - 2066873 + | hypothetical protein opgH 2068982 - 2066883 - | glucosyltransferase MdoH TERM 1339 2068992 - 2068957 - G 78 -5.9 -4.63218 | overlap 2068958 TCGGCGGGAAGAAAA TCCACGCCCGCATCG TCAATC CGCAACGGGCGCGGC GTGCGTGCGCTCACG mdoG 2070490 - 2069003 - | glucan biosynthesis protein G TERM 1340 2070789 - 2070811 + H 85 -14.8 -3.53811 | ACGGACGGTGGGCAC GCATCCGCCC TCC GGGCGGCTGC TTTGCCCACCCTACG TERM 1341 2071694 - 2071650 - g 79 -4.8 -4.73388 | overlap 2071668 AAGCTCGAGGAAAAA GGCGGTAACGGCAAGAAGCC GAAGG AGCCTCGGGCCTCCACCACC GATCCGCAGGCGCGG BRADO1948 2070885 - 2072243 + | putative transposase BRADO1949 2073055 - 2072423 - | LysR family transcriptional regulator BRADO1950 2073125 - 2073961 + | hypothetical protein TERM 1342 2074061 - 2074089 + T 78 -14.6 -3.07522 | TCGGATGGGCCGGTG ATGCCCTCTCCC ACAAG GGGAGAGGGCAC TGTATTGCGCAGTCT TERM 1343 2074611 - 2074587 - T 70 -7.8 -3.98816 | gap 1, overlap 2074576 2074588 CAAACGAACAGCAAA GCTCG-GGCGC AGAT GCGCCGCGAGG AGTTGACTGCATGTC TERM 1344 2074690 - 2074634 - T 71 -13.8 -2.53263 | overlap 2074638 TGCATGTCTAAGCGA TACAGCGCTGCCGTAGCCCGGATG-AGC GCA GCGACATCCGGGGTCCAAC-GCGCTGTA CCGGAGAACCCGGAT TERM 1345 2074776 - 2074834 + T 91 -21 -2.71712 | opp_overlap 2074818 2074819 2074822, overlap 2074777 CCGGGGCGCGCGTAG CGCGAGCCCGGAATCCATCGGGCCGC AGGTGTC GTCGCCAAATGGAGTCCGGGCTCGCG CTTTCGCGCGCCCCG BRADO1951 2076321 - 2074876 - | XRE family transcriptional regulator TERM 1346 2075013 - 2075027 + g 72 -5.6 -4.38712 | overlap 2075014 GGCAGTTGACGCCGA TCGGGG TGC CCTCGG TTTTCTCCAGGTCCA TERM 1347 2075918 - 2075894 - G 70 -11.3 -3.53012 | GGGTTGGCCTCGAAA TGGCCGCCGGC ATT GCGGTCGGCCA TCTGCGCCGCCACCA BRADO1952 2076535 - 2076723 + | hypothetical protein TERM 1348 2076782 - 2076832 + F 100 -16.8 -4.08945 | gap 1, opp_overlap 2076777 2076786 2076818, overlap 2076783 2076819 TCAAGGAAGAGCCCA AGGACG-GGGCGGTCTCAGCCGG GTCACA CCGGAAGAGGCCGCCCACGTCCG TTTTGGGCGCCTCGT TERM 1349 2076783 - 2076831 + F 93 -20.3 -3.05046 | gap 1, opp_overlap 2076777 2076786 2076818, overlap 2076782 2076819 CAAGGAAGAGCCCAA GGACG-GGGCGGTCTCAGCCGG GTCACA CCGGAAGAGGCCGCCCACGTCC GTTTTGGGCGCCTCG TERM 1350 2077482 - 2077522 + G 95 -16.9 -3.86346 | CTTGGCGCAGTGTCG CTGTTCGGCTTCGCGCTCT ACG AGAGCCTGAAGCCGGTCAG TTTCTGACGCGATCA BRADO1953 2077017 - 2077529 + | hypothetical protein BRADO1954 2078422 - 2077535 - | putative metallo-phosphoesterase BRADO1955 2078589 - 2079059 + | putative NUDIX hydrolase BRADO1956 2079093 - 2080040 + | putative glycosyl transferase BRADO1957 2080154 - 2081326 + | putative amidohydrolase family protein; putative hippurate hydrolase (benzoylglycine amidohydrolase) TERM 1351 2081340 - 2081355 + F 83 -11.8 -4.07568 | opp_overlap 2081311 GAGGCTCGGCCGGAA CCCGGC GGCC GCCGGG TTTTGACGGAGGGAG BRADO1958 2081417 - 2081929 + | putative acetyltransferase BRADO1959 2084421 - 2082070 - | putative outer membrane hemin/siderophore receptor protein TERM 1352 2082799 - 2082777 - G 75 -6.9 -4.36914 | gap 1 CGCCGCGGGAGAAAA GCTCG-GCCG CCTT CGGCGCGCGC TCGACATATTGGGCG TERM 1353 2083262 - 2083274 + g 73 -9.1 -3.99678 | GTCGGATCAGCGGGG TCGGC GAG GCCGA TTTCATTGTGCCGAT TERM 1354 2084176 - 2084192 + g 72 -11.5 -3.53012 | CTGTTGCGGCGGAGG CGGCGCG CTC TGCGCCG TTTGCGCGGGCGCCC BRADO1960 2084930 - 2084559 - | putative signal peptide BRADO1961 2087181 - 2085118 - | hypothetical protein TERM 1355 2086180 - 2086231 + g 73 -13.1 -3.28924 | opp_overlap 2086192 CTGCTGGAACAGCTC GCGGGTCGGAAACG-CGATCAGCGA CAGC TCGTTGATCGGCG-TGCCGTCCTGC TTCTCCGGCGGCCTC BRADO1962 2090137 - 2087324 - | hypothetical protein BRADO1963 2091093 - 2090134 - | hypothetical protein BRADO1964 2092088 - 2091090 - | putative MoxR family protein. BRADO1965 2092301 - 2092954 + | hypothetical protein BRADO1966 2092990 - 2093625 + | putative NUDIX hydrolase BRADO1967 2093622 - 2093885 + | hypothetical protein BRADO1968 2093882 - 2095135 + | putative poly(A) polymerase BRADO1969 2095132 - 2095908 + | hypothetical protein BRADO1970 2097952 - 2096006 - | diguanylate cyclase BRADO1971 2098956 - 2098231 - | putative phosphoglycolate phosphatase hemF 2099876 - 2098989 - | coproporphyrinogen III oxidase TERM 1356 2099286 - 2099262 - G 74 -5.6 -4.49311 | gap 1, opp_overlap 2099265, overlap 2099265 ATGATGATCATAAAA GATGCCGC-CG ATGC CGCGCGGCTCC TTGCGATGCGGCAGG BRADO1973 2100335 - 2099979 - | putative 6-pyruvoyltetrahydropterin synthase BRADO1974 2100994 - 2100362 - | hypothetical protein BRADO1975 2101476 - 2100991 - | putative tRNA/rRNA methyltransferase TERM 1357 2101628 - 2101661 + H 79 -8.1 -4.36914 | gap 1 TAGAACGATTCTGGA CGGCGCGTTCCTACCG GGG CGGTA-GCACGAGTCG TTTTCTGCCGCCGCG BRADO1976 2101867 - 2102313 + | ubiquinol-cytochrome c reductase iron-sulfur subunit (Rieske iron-sulfur protein) (RISP) BRADO1977 2102376 - 2104439 + | cytochrome b/c1 TERM 1358 2104468 - 2104481 + F 100 -9.5 -5.4505 | opp_overlap 2104468 TTTCGATCCTGAAAA GCCCC TGCG GGGGC TTTTTTGTTGCGCCG TERM 1359 2104481 - 2104468 - f 79 -9.5 -4.11216 | opp_overlap 2104468 TTTCGATCCTGAAAA GCCCC TGCG GGGGC TTTTTTGTTGCGCCG TERM 1360 2104504 - 2104531 + F 73 -8.4 -4.07568 | gap 1 TTGCGCCGAGTCTGC CGTGTCGTGCCGC TCG GCGG-ACGGCAGG TTTTGCCGCGCGCGC BRADO1978 2104693 - 2105709 + | hypothetical protein BRADO1979 2106264 - 2105791 - | ankyrin repeat-containing protein TERM 1361 2105847 - 2105827 - G 71 -12.6 -3.30124 | GCCCAGGCTCGACAA CTCGACGG TACCT CCGTCGAG CGCCTGCTGCAGCAG BRADO1982 2107539 - 2106718 - | hypothetical protein TERM 1362 2108120 - 2108137 + H 74 -4.8 -4.66953 | overlap 2108121 GTGCATTGCTGGTCG TGCTCG ATCGCG CGAGCG TTTTTGGGATCTTGC BRADO1983 2108191 - 2108313 + | hypothetical protein BRADO1984 2109041 - 2108364 - | hypothetical protein TERM 1363 2109001 - 2108987 - G 72 -8.5 -4.14739 | TGATCCATCTGAAAA CGCCG TATCC CGGCG ATCGAGCGGTTGCGG BRADO1985 2109572 - 2110477 + | hypothetical protein BRADO1986 2110648 - 2111322 + | putative carboxymethylenebutenolidase TERM 1364 2111352 - 2111386 + F 72 -12.1 -3.30159 | overlap 2111353 2111354 CTCGTCGCCCTTGCC G-TCGCACCGCGCGGCG TCA CACCGCGCGG-GCGGTC TTCTCGGCGGCTTCG TERM 1365 2111353 - 2111384 + F 83 -15.8 -3.21772 | gap 1, overlap 2111352 2111354 TCGTCGCCCTTGCCG TCGCACCGCGCGGCG TCA CACCGCGCGG-GCGG TCTTCTCGGCGGCTT TERM 1366 2111354 - 2111383 + F 83 -17.1 -2.52742 | gap 1, overlap 2111353 2111352 CGTCGCCCTTGCCGT CGCACCGCGCGGCG TCA CACCGCGCGG-GCG GTCTTCTCGGCGGCT TERM 1367 2111464 - 2111501 + F 100 -14.7 -4.13945 | CGGGCCGTCGACCGA GGGCGCCGCGTCGGCGG AGCG CCGACGACGCTTCGTCC TTTTCGCCTGCGCCT BRADO1988 2111967 - 2113019 + | hypothetical protein BRADO1990 2113460 - 2114308 + | hypothetical protein TERM 1368 2114397 - 2114409 + F 74 -4.9 -4.55887 | CTGTTCAGTCCTTCG CAAAA AAT TTTTG TTTCTATTTTTCAGA TERM 1369 2115051 - 2115075 + F 70 -9.9 -3.53811 | overlap 2115069 TGTCCCCGCCGCCCT TGACCCCGGCC GCC GCCCGTGGTCA TTTCCGCGGGATGAG trpE(G) 2115259 - 2117424 + | anthranilate synthase TERM 1370 2117803 - 2117793 - g 93 -6.8 -5.1861 | overlap 2117798 CCGATCAGGAAAAAA GGCA AGC TGCC GCACAAGACGGTCAG apt 2117541 - 2118080 + | adenine phosphoribosyltransferase BRADO1993 2118758 - 2118090 - | hypothetical protein BRADO1994 2119624 - 2118815 - | hypothetical protein TERM 1371 2119597 - 2119617 + g 74 -10.4 -3.83756 | gap 1, overlap 2119597 GTCCTTCAGCCCTGA G-GCCGGCC AGAG GGCCGGCGC TTTGCATTCTGCTTT BRADO1995 2119755 - 2119835 + | hypothetical protein BRADO1996 2121022 - 2119844 - | putative protease htpX; putative membrane protein BRADO1997 2121613 - 2121056 - | putative signal peptide TERM 1372 2121668 - 2121691 + r 77 -15.3 -2.56596 | overlap 2121665 AGCACGTGGCGGCGC CGCCGGTCC TGGGGT GGACCGGCG TGCATTGGTCGCGGC BRADO1998 2122198 - 2121803 - | hypothetical protein BRADO1999 2123377 - 2122376 - | putative SAM methyltransferase BRADO2000 2126892 - 2123428 - | putative chromosome segregation SMC protein TERM 1373 2124846 - 2124875 + g 81 -14.9 -3.53444 | opp_overlap 2124837 AATTGACCTCGCGCT GCGCGGCGCGCCA CGCT TCGCGCGCGGCGC TTTCCGCAGCCGTCG TERM 1374 2125306 - 2125318 + g 88 -10.5 -4.36931 | overlap 2125288 ATCGTCGCCGAGCAC GGCGC CGA GCGCC TTTTCATATCCCTTG TERM 1375 2127104 - 2127084 - R 81 -11.8 -3.86653 | opp_overlap 2127082 2127079 2127098 AGCCACCAAACAGAA GCGACCCC ACGAA GGGGCCGC ACTGTGTCTCGTTTG BRADO2001 2127815 - 2127135 - | hypothetical protein BRADO2002 2128389 - 2127910 - | hypothetical protein BRADO2003 2128728 - 2128408 - | hypothetical protein TERM 1376 2129058 - 2129078 + H 72 -2.3 -4.74598 | overlap 2129056 AGCTGGGGACTTCCA GGCCGGTGC GCT GGTCCGTCC TTTGTTTTCGCTTTA mutY 2129104 - 2130198 + | adenine glycosylase mutY TERM 1377 2130317 - 2130362 + F 85 -14.6 -3.53811 | gap 1, opp_overlap 2130332 CACCATCGTGCCCCC GAGTCCGCCGCAAGACGGTGG GCACG CCGCCGCCT-GCGGCGGCCGC TTTGCCCACCCTGCG TERM 1378 2130373 - 2130332 - f 84 -16.5 -3.01924 | gap 1, opp_overlap 2130317 GAGTCCGCCGCAAGA CGGTGGGCA-CGCCGCCGCC TGC GGCGGCCGCTTTGCCCACCC TGCGGCAGCTACAAC TERM 1379 2130507 - 2130534 + F 74 -12.6 -3.28712 | GGGTCCCGGATCGGC GCCACGCCGCGC TGTC GCACGCCGTGGC TTGTCCGGGACGACG TERM 1380 2131248 - 2131278 + F 84 -8.9 -4.39696 | gap 1, opp_overlap 2131241 2131240 CATGAAAGGTGCCGT TC-CCGAGGCCGGC ACAT GCCGGCCGCGCAGA TTTGTTCATTTGCCG gst 2131356 - 2131976 + | glutathione S-transferase TERM 1381 2132745 - 2132769 + G 77 -13.5 -3.53224 | opp_overlap 2132736 AGGCAAGGCGATCGC CGGCGCGCACG CCG CGTTCGCGCTG TTTGCGACCGCGATG BRADO2007 2132206 - 2132796 + | putative heme oxygenase TERM 1382 2133333 - 2133349 + G 74 -10.1 -3.78022 | ATCGCGGAGACGGCG GGCTCGG GCC TCGAGCC TTTCCTCGGTCTGCA BRADO2008 2132793 - 2135354 + | putative bacteriophytochrome TERM 1383 2136119 - 2136100 - g 72 -13.6 -3.12351 | CGGGCGGAGATCCAA TCGTCGCC ATCC GGCGACGA CACGAAGACCGCGTC BRADO2009 2135794 - 2136822 + | putative signal peptide BRADO2010 2137861 - 2136827 - | adenine DNA methyltransferase TERM 1384 2137146 - 2137088 - G 100 -20 -3.30441 | overlap 2137089 2137121 GATCAGTTCTGAGAA GGCCACCCGCGGCGCCTCGCGCGCCGTC ATG AACGGCGCGAGCGTCTCCGCGGGGAGCG GCTCGACCGCGGCAA TERM 1385 2137145 - 2137089 - G 100 -23.5 -2.5805 | overlap 2137088 2137121 ATCAGTTCTGAGAAG GCCACCCGCGGCGCCTCGCGCGCCGTC ATG AACGGCGCGAGCGTCTCCGCGGGGAGC GGCTCGACCGCGGCA BRADO2011 2138421 - 2139266 + | hypothetical protein moaB 2139278 - 2139838 + | molybdenum cofactor biosynthesis protein B BRADO2013 2140948 - 2140010 - | MarR family transcriptional regulator BRADO2014 2141587 - 2141015 - | glycosyl transferase family protein TERM 1386 2141395 - 2141350 - G 79 -16.7 -2.89797 | gap 1, overlap 2141345 2141347 CCGGCAGAAACATCA GCCACGGCGCCCGCGCGCGGGC GGC GCCGGCGGCCAGG-GCCGCGGC ATGGGAGCCCTCGAA xfp 2144226 - 2141749 - | putative phosphoketolase BRADO2016 2144415 - 2145530 + | hypothetical protein rnhB 2145764 - 2146633 + | ribonuclease HII TERM 1387 2147332 - 2147374 + G 76 -14.6 -3.17051 | opp_overlap 2147296, overlap 2147330 2147356 GCCTGGTCGATCGAG GCCGGCCTGCTGCTGCTGAC CAC GCCGGCGGCCGCCGGCCTGC TGTTGCTGATCGCCG TERM 1388 2147887 - 2147909 + G 74 -10.4 -3.78775 | overlap 2147884 CTGCGCATGGTCTGG GCGGCGGCGG TCG CCGCGCCCGC TTTGCTCGTCGCCGG TERM 1389 2147954 - 2147996 + G 70 -6.1 -4.24342 | gap 1, overlap 2147955 AGCCCCTGCTCGGTG ATGGCGAGGTCGCGACGTCG ATGC CGGCG-CGCGACATCTCCCG TTTCTTCGTCGAAAG BRADO2018 2146831 - 2148339 + | hypothetical protein TERM 1390 2148461 - 2148410 - T 75 -13.4 -3.09516 | gap 2, opp_overlap 2148407 2148418 2148422, overlap 2148414 2148418 2148422 CTTGCGAGGAGCGAA GCGA--CGAAGCAATCCAGAGT CCCGCCCACC ACTCTGGATTGCTTCGCTTCGC CGCTTCGTTCGCAAT TERM 1391 2148455 - 2148414 - T 83 -17.6 -2.55544 | opp_overlap 2148407 2148418 2148422, overlap 2148410 2148418 2148422 CGAGGAGCGAAGCGA CGAAGCAATCCAGAGT CCCGCCCACC ACTCTGGATTGCTTCG CTTCGCCGCTTCGTT BRADO2019 2149314 - 2148493 - | putative DNA polymerases TERM 1392 2149161 - 2149219 + g 72 -12.9 -3.17212 | gap 2, opp_overlap 2149128, overlap 2149161 GGCCCGGCTGCGGCG CGGCCTGGCGG-GC-GGCAGCGGCGACGG GCG CCGGCGCCGCGTCCGGCTCCACCAGCCGG TTGATCGGATCATCG TERM 1393 2149161 - 2149218 + g 77 -16.2 -2.50113 | gap 3, opp_overlap 2149128, overlap 2149161 GGCCCGGCTGCGGCG CGGCCTGGCGG-GC-GGCAGCGGCGACGG GCG CCGGCGCCGCGTCCGGCTCCACCAG-CCG GTTGATCGGATCATC TERM 1394 2150747 - 2150766 + G 70 -13.6 -3.07895 | opp_overlap 2150738 GAGAATGCCTGGCGC TCCTCGCC GGTC GGCGAGGA TCTGTTCAAGGTCCG BRADO2020 2149619 - 2151277 + | putative electron transfer flavoprotein dehydrogenases BRADO2021 2151566 - 2153317 + | TPR repeat-containing protein TERM 1395 2153340 - 2153380 + F 100 -14 -4.26344 | gap 1, opp_overlap 2153340 2153344, overlap 2153344 CCGATCAGGATTGAA GCCATCACGGGCTCCTCGG CTTG CCGGGGAGCCCG-GATTGA TTTTGATGAAGGTGT TERM 1396 2153376 - 2153344 - f 77 -15.6 -2.55544 | gap 1, opp_overlap 2153344 2153340, overlap 2153340 TCAGGATTGAAGCCA TCACGGGCTCCTCGG CTTG CCGGGGAGCCCG-GA TTGATTTTGATGAAG TERM 1397 2153344 - 2153376 + F 100 -17.8 -3.71672 | gap 1, opp_overlap 2153340 2153344, overlap 2153340 TCAGGATTGAAGCCA TCACGGGCTCCTCGG CTTG CCGGGGAGCCCG-GA TTGATTTTGATGAAG ispE 2153479 - 2154381 + | 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; isopentenyl monophosphate kinase ispB 2155653 - 2154643 - | octaprenyl diphosphate synthase TERM 1398 2155317 - 2155343 + g 71 -9.5 -3.87149 | opp_overlap 2155317 CGTTGCCCCACAGCA TGCG-CGCGGACA ATT TG-CCGCGGCGCA TTTCACTTTCATCAA TERM 1399 2155713 - 2155695 - H 73 -6.6 -4.31815 | overlap 2155696 AAACGACAATAGAAA CTGCGGCC GCG GGCGGCAA GGGCGGACACGGAAC BRADO2024 2155786 - 2156013 + | hypothetical protein TERM 1400 2156346 - 2156313 - g 77 -12.4 -3.67597 | gap 1, opp_overlap 2156314, overlap 2156314 CGCTGGACGTAACAA GCGAGGCC-GCCGCG TTTGC CGCAGCAGGCCTCGG GTCCGACAGTGTTGA TERM 1401 2156345 - 2156314 - g 75 -15.9 -2.80344 | gap 1, opp_overlap 2156314, overlap 2156313 GCTGGACGTAACAAG CGAGGCC-GCCGCG TTTGC CGCAGCAGGCCTCG GGTCCGACAGTGTTG BRADO2025 2156006 - 2156779 + | hypothetical protein BRADO2026 2156945 - 2156793 - | hypothetical protein TERM 1402 2156924 - 2156953 + g 73 -10.7 -3.63341 | overlap 2156951 TCTGCAACTTGTTCA GCCGTGCAATTGC CCAG GCCATTGCAAGGC TTGTTCCAGCCTATT TERM 1403 2157572 - 2157592 + G 71 -12.5 -3.28416 | opp_overlap 2157571 2157568 CGGCTGAAGAAGATC CAGCGCGAG ATC CACGCGCTG TTCATCTCGCTGGTC BRADO2027 2157065 - 2157931 + | putative serine protease SohB BRADO2028 2158036 - 2158227 + | hypothetical protein TERM 1404 2158249 - 2158266 + F 100 -14.1 -4.37658 | opp_overlap 2158249 CCACTGCAATCGAAA CGGCGGC CTCC GCCGCCG TTTTGTCCGCCCCTT TERM 1405 2158266 - 2158249 - f 84 -14.1 -3.76125 | opp_overlap 2158249 CCACTGCAATCGAAA CGGCGGC CTCC GCCGCCG TTTTGTCCGCCCCTT glyQ 2158345 - 2159286 + | glycyl-tRNA synthetase subunit alpha BRADO2030 2159283 - 2159528 + | hypothetical protein glyS 2159654 - 2161972 + | glycyl-tRNA synthetase subunit beta TERM 1406 2162191 - 2162239 + T 93 -20.3 -3.06183 | opp_overlap 2162195 CGCTCTTGCGCCGAA GCAATCCAGGGGCCGTGCAGGCA GAC TGTCCGTGTGGCCCCTGGATCGC TTCGCTGGCGCTCGC TERM 1407 2162235 - 2162195 - T 72 -11.7 -3.33696 | opp_overlap 2162191 CTTGCGCCGAAGCAA TCCAGGGGCCGTGCAGGCA GAC TGTCCGTGTGGCCCCTGGA TCGCTTCGCTGGCGC TERM 1408 2162329 - 2162289 - T 100 -8.4 -5.40474 | gap 2, opp_overlap 2162292 2162293, overlap 2162293 AGCGTTCCAAAAAAA GTAA--GCCCCGCCCGGC GGGGGGA ACCGGGCAGGGCCTTTAC ATCTGGCCGCTTGCG TERM 1409 2162292 - 2162324 + T 71 -9 -3.70902 | opp_overlap 2162289 2162293, overlap 2162293 GTTCCAAAAAAAGTA AGCCCCGCCCGG CGGGGGGAA CCGGGCAGGGCC TTTACATCTGGCCGC TERM 1410 2162323 - 2162293 - T 95 -15.4 -4.03885 | opp_overlap 2162293 2162292, overlap 2162289 TTCCAAAAAAAGTAA GCCCCGCCCGGC GGGGGGA ACCGGGCAGGGC CTTTACATCTGGCCG BRADO2032 2162723 - 2162376 - | putative signal peptide BRADO2033 2162980 - 2163135 + | hypothetical protein ppdK 2163240 - 2166191 + | pyruvate phosphate dikinase TERM 1411 2166220 - 2166240 + F 100 -14 -5.27335 | opp_overlap 2166217 GTTTCGAATTGAGGA GGCCGGCA CATGT TGCCGGCC TTTTTCTTTGAGGCG TERM 1412 2166569 - 2166609 + G 70 -13.2 -2.9518 | overlap 2166561 ATGTTAGTTCTGCGT CCAGGTCCGAAGGGCGCG CGTAT TGCGTCCTTCGGCCTCGG TCTCTGCGTCTTCGC BRADO2035 2166542 - 2168032 + | hypothetical protein nadB 2169843 - 2168200 - | L-aspartate oxidase TERM 1413 2168909 - 2168899 - G 70 -8.2 -3.91897 | opp_overlap 2168901, overlap 2168900 GCGCGCATCCAGAAA GGCG CCG CGCC CGGCCGTGATCTCGG BRADO2037 2170195 - 2171439 + | putative MFS permease BRADO2038 2171504 - 2172490 + | dehydrogenase NAD(P)-binding domain-containing protein BRADO2039 2172701 - 2173321 + | hypothetical protein BRADO2040 2173499 - 2173732 + | hypothetical protein TERM 1414 2173872 - 2173847 - f 74 -11.9 -3.49618 | opp_overlap 2173809 2173808 CTTGGAGACAACGAA TTGCGCGACAA GCCT TTGTCGCGCGA TCGATCTCGCCGTCG TERM 1415 2173880 - 2173903 + F 93 -19.6 -3.07113 | TCGCGCGATCGATCT CGCCGTCGGC CTCA GCCGACGGCG TTCGATCGCCTCCTG TERM 1416 2174217 - 2174199 - f 72 -12.4 -3.30159 | opp_overlap 2174196 2174209, overlap 2174188 GGAACGGTTTCAGAA CACCGCGC GGG GCGCGATG GTGGGCCTTTTACGT BRADO2041 2174445 - 2176133 + | putative methyl-accepting chemotaxis receptor/sensory transducer precursor TERM 1417 2176208 - 2176236 + F 100 -11.1 -4.98531 | gap 1, opp_overlap 2176208 2176216, overlap 2176202 AACTTTGCGGACGAA GCGGCAAACTGC GCGGCG GCAG-TTGCCGC TTTTTCGTTTCGCAG BRADO2042 2176271 - 2178022 + | putative methyl-accepting chemotaxis receptor/sensory transducer precursor BRADO2043 2180710 - 2178026 - | putative MSF permease TERM 1418 2179545 - 2179516 - G 75 -6.9 -4.35461 | overlap 2179507 2179517 2179518 CGAACACGAGGAAAA CCGTGGCTGCCGC CGCT GCGACCGCGCCGG TTGCGCTCGGCGCGC TERM 1419 2180152 - 2180130 - G 74 -12.6 -3.54129 | opp_overlap 2180140, overlap 2180131 TAGACGGTGGCGAAA GCCACCGCCG TCC CGGCGGCGGT CAGGATCGCCGGGAT TERM 1420 2180151 - 2180131 - G 77 -16.1 -2.72263 | opp_overlap 2180140, overlap 2180130 AGACGGTGGCGAAAG CCACCGCCG TCC CGGCGGCGG TCAGGATCGCCGGGA BRADO2044 2181554 - 2181048 - | hypothetical protein BRADO2045 2182306 - 2181689 - | putative metal dependent phosphohydrolase TERM 1421 2181884 - 2181836 - G 75 -9.2 -4.07568 | opp_overlap 2181836 CTCGCTTTCGGAAAA GCCGGCGAGCCGGGTCGCCTCC AGATA GGCGGCGCCGCGGTCGGCCGCC TTGATCTGGCGCTCG tag 2182929 - 2182303 - | 3-methyl-adenine DNA glycosylase I, constitutive TERM 1422 2182399 - 2182360 - G 89 -18 -3.28712 | gap 1 GGTCTCGTGGCAGAA GCAGGTGA-CGAGATGGTC GTT GACCATCCCGGTCGCCTGC ATGAAGGCGTAGACG BRADO2047 2183820 - 2182936 - | putative glycine cleavage T protein (aminomethyl transferase) BRADO2048 2184018 - 2185352 + | dihydroorotase BRADO2049 2186140 - 2185622 - | chemotaxis protein TERM 1423 2186586 - 2186564 - R 77 -12.6 -3.53811 | GGTAGGGTGGGCAAA GCAGCCGCCC CCA GGGCGGTCGC GTGCCCACCGTCGTG BRADO2050 2186943 - 2186716 - | hypothetical protein TERM 1424 2186842 - 2186896 + g 93 -19.6 -2.73681 | gap 4, opp_overlap 2186838, overlap 2186890 2186891 2186893 CGCGGCGAACAGGCT GGCCTGGGCC-AGGCAGTCGCCATCGAC GCC GTC-ATGGCG-C-GCTTCGGCCCAGGCC TCGTTGAGGTAGCTG BRADO2051 2187633 - 2187289 - | hypothetical protein BRADO2052 2188159 - 2187731 - | putative Nudix hydrolase family protein; putative ADP-ribose pyrophosphatase BRADO2053 2188753 - 2188223 - | hypothetical protein BRADO2054 2188996 - 2189610 + | hypothetical protein BRADO2055 2190349 - 2189768 - | putative pyrophosphatase BRADO2056 2190817 - 2190362 - | putative acetyltransferase BRADO2057 2192254 - 2190827 - | putative D-lactate ferricytochrome C oxidoreductase BRADO2058 2193274 - 2192273 - | hypothetical protein TERM 1425 2193039 - 2192990 - G 71 -12.7 -3.28712 | gap 1, overlap 2192991 CGGTCCCGGCCAGAA GGCGGCGG-CCAGGCGCTCCGCCG TGG CATCGAAGCGGCCGATCCGCCGCG CCGCCGCTGCGTCGG TERM 1426 2193038 - 2192991 - G 77 -16.2 -2.57132 | gap 1, overlap 2192990 GGTCCCGGCCAGAAG GCGGCGG-CCAGGCGCTCCGCCG TGG CATCGAAGCGGCCGATCCGCCGC GCCGCCGCTGCGTCG TERM 1427 2195108 - 2195162 + G 70 -6.3 -4.24342 | overlap 2195110 GGTGCTGTCGCATCT GACCTGGACCGCGGGCCATGCGCT-GG TGG CCGAGAGCATGCAGCGCGG-CCGGGTG TTTCTTGGTGGCGAC TERM 1428 2195531 - 2195568 + G 76 -8.9 -4.1891 | overlap 2195533 2195534 CTCCCCGATCATCGT CCCCGACGGCACCCGGC CGCC GCCGGATGCTGCCGATG TTTATGTTCCCAGCG TERM 1429 2195533 - 2195566 + G 70 -10.1 -3.6944 | overlap 2195531 2195534 CCCCGATCATCGTCC CCGACGGCACCCGGC CGCC GCCGGATGCTGCCGA TGTTTATGTTCCCAG BRADO2059 2194227 - 2195900 + | hypothetical protein TERM 1430 2197347 - 2197374 + G 75 -9 -4.15565 | gap 1, opp_overlap 2197346, overlap 2197350 ATGCCACGATCGAAG CCGCGCGCG-CGG GCT CCGCCGGCCGCGG TTTTGCGATCGTGGC BRADO2060 2196047 - 2197780 + | putative methyl-accepting chemotaxis receptor/sensory transducer; putative signal peptide BRADO2061 2197945 - 2198478 + | putative signal peptide TERM 1431 2198506 - 2198532 + T 91 -15.1 -3.94634 | GTTGAGGCCAAGCTG TGCCGCCCAGG TTGAT CCCGGGCGGCA TTGTTTCGAGTCCTA BRADO2062 2199597 - 2198545 - | putative sugar-nucleotide epimerase/dehydratase BRADO2063 2200733 - 2199594 - | putative glycosyltransferase BRADO2064 2201818 - 2200730 - | hypothetical protein BRADO2065 2202942 - 2201815 - | putative glycosyltransferase BRADO2066 2204063 - 2202939 - | putative glycosyltransferase protein BRADO2067 2205349 - 2204060 - | putative Fe-S oxidoreductase BRADO2068 2206407 - 2205346 - | putative CDP-tyvelose-2-epimerase BRADO2069 2207513 - 2206404 - | putative NAD-dependent epimerase/dehydratasen; putative UDP-glucose 4-epimerase deoB 2208859 - 2207636 - | phosphopentomutase BRADO2071 2209791 - 2208847 - | putative transglycosidase BRADO2072 2210552 - 2209788 - | putative 3-demethylubiquinone-9 3-O-methyltransferase BRADO2073 2211349 - 2210549 - | putative UTP--glucose-1-phosphate thymidylyltransferase BRADO2074 2212451 - 2211351 - | putative glycosyltransferase BRADO2075 2212975 - 2212448 - | putative phosphoglycerate mutase BRADO2076 2214162 - 2213047 - | hypothetical protein TERM 1432 2214312 - 2214299 - H 72 -3.8 -4.60487 | GATTAGCGGCAAAAA CAGC GGAAAA GCTG ATCTACATTAGAAAC BRADO2077 2214474 - 2214749 + | hypothetical protein TERM 1433 2214903 - 2214938 + GT 74 -11.8 -3.44586 | gap 1, opp_overlap 2214906, overlap 2214904 CGCGTCACCTGCAGA GGATCTGGCGCGGCGAG GAG CTCGCCG-GCCGGACCG TTCTGGTGCGTTGCT TERM 1434 2214904 - 2214937 + GT 77 -15.3 -2.6627 | gap 1, opp_overlap 2214906, overlap 2214903 GCGTCACCTGCAGAG GATCTGGCGCGGCGAG GAG CTCGCCG-GCCGGACC GTTCTGGTGCGTTGC TERM 1435 2214935 - 2214906 - gT 74 -14.3 -2.62983 | gap 1, opp_overlap 2214904 2214903 GTCACCTGCAGAGGA TCTGGCGCGGCGAG GAG CTCGCCG-GCCGGA CCGTTCTGGTGCGTT BRADO2079 2216468 - 2215674 - | CRP/FNR family transcriptional regulator BRADO2078 2214746 - 2215813 + | TPR repeat-containing protein TERM 1436 2216159 - 2216133 - Gf 75 -12.3 -3.61517 | gap 1, overlap 2216148 AGCCTCGCGGAAGAA GCCGTG-CGGCA CGAA CGCCGCCACGGC CGGACTGAGCGCGCA TERM 1437 2216879 - 2216859 - g 74 -12.6 -3.5393 | opp_overlap 2216858 2216857 2216855 AGCAGCCGTTCGAAA CCGAGGAG GCGCG CTCCTCGG CCTTCTTGTCGATCT BRADO2080 2216720 - 2216992 + | hypothetical protein BRADO2081 2217092 - 2217607 + | putative acetyltransferase TERM 1438 2217642 - 2217679 + T 87 -17.1 -2.88861 | gap 1, opp_overlap 2217649, overlap 2217645 2217649 2217675 ATGCCGCCATCCCAA CAGCA-AACGGCCCGGTC GCC GACCGGGCCGTGGTGTTG TGTCTCGACATCCTA TERM 1439 2217645 - 2217676 + T 86 -15.2 -3.59202 | gap 1, opp_overlap 2217649, overlap 2217642 2217649 2217675 CCGCCATCCCAACAG CA-AACGGCCCGGTC GCC GACCGGGCCGTGGTG TTGTGTCTCGACATC TERM 1440 2217649 - 2217671 + T 93 -20.6 -2.84707 | opp_overlap 2217649, overlap 2217645 2217642 CATCCCAACAGCAAA CGGCCCGGTC GCC GACCGGGCCG TGGTGTTGTGTCTCG TERM 1441 2217671 - 2217649 - T 100 -20.6 -3.93038 | opp_overlap 2217649 2217645 2217642 CATCCCAACAGCAAA CGGCCCGGTC GCC GACCGGGCCG TGGTGTTGTGTCTCG BRADO2082 2218537 - 2217692 - | hypothetical protein BRADO2083 2218719 - 2218591 - | hypothetical protein BRADO2084 2219186 - 2218941 - | putative signal peptide TERM 1442 2220236 - 2220294 + G 80 -15.9 -3.29987 | gap 1, overlap 2220262 CGAGGAGCCGAAATG GCGCTGGATCAGCTGGGGCAGCGCGCTG GCGG CGGCGCTCTGGCTCGGCGGGTC-GGCGC TGTTCTCCTGGTATG BRADO2085 2219466 - 2220527 + | putative ribonuclease TERM 1443 2220570 - 2220621 + F 81 -13.8 -3.55973 | gap 1, opp_overlap 2220581 2220585, overlap 2220581 2220585 2220598 CTGAGGCTTCTTCAT CACGGCAGCAAGTCAGTCGGGTTCC GCG GGAACCCGACTGGGTTGAA-TCGTG TTCCTTGTTGGATTG TERM 1444 2220581 - 2220611 + F 86 -16.2 -3.137 | opp_overlap 2220581 2220585, overlap 2220570 2220585 2220598 TCATCACGGCAGCAA GTCAGTCGGGTTCC GCG GGAACCCGACTGGG TTGAATCGTGTTCCT TERM 1445 2220611 - 2220581 - f 76 -14 -3.17212 | opp_overlap 2220581 2220570 2220585 2220598, overlap 2220585 TCATCACGGCAGCAA GTCAGTCGGGTTCC GCG GGAACCCGACTGGG TTGAATCGTGTTCCT TERM 1446 2220585 - 2220607 + F 86 -17.8 -2.55722 | opp_overlap 2220581 2220585, overlap 2220581 2220570 2220598 CACGGCAGCAAGTCA GTCGGGTTCC GCG GGAACCCGAC TGGGTTGAATCGTGT TERM 1447 2220607 - 2220585 - f 86 -17.8 -2.56914 | opp_overlap 2220585 2220581 2220570 2220598, overlap 2220581 CACGGCAGCAAGTCA GTCGGGTTCC GCG GGAACCCGAC TGGGTTGAATCGTGT BRADO2086 2220713 - 2222233 + | hypothetical protein BRADO2087 2222223 - 2223920 + | sensor histidine kinase bam 2225386 - 2223962 - | indoleacetamide hydrolase (IAH) (indole-3-acetamide hydrolase) BRADO2089 2225597 - 2227609 + | sensor histidine kinase TERM 1448 2227623 - 2227648 + F 100 -12.7 -4.54727 | gap 1, opp_overlap 2227610 2227623 2227626, overlap 2227626 AAGCGCGCCCGCAAA TCAGTCCTGCGT GGA ACGCAGGAC-GA TTTTGATTTGCCGCA TERM 1449 2227648 - 2227623 - f 76 -12.7 -3.53343 | gap 1, opp_overlap 2227623 2227626, overlap 2227610 2227626 AAGCGCGCCCGCAAA TCAGTCCTGCGT GGA ACGCAGGAC-GA TTTTGATTTGCCGCA TERM 1450 2227626 - 2227646 + F 77 -15.5 -2.5893 | opp_overlap 2227610 2227623 2227626, overlap 2227623 CGCGCCCGCAAATCA GTCCTGCGT GGA ACGCAGGAC GATTTTGATTTGCCG TERM 1451 2227646 - 2227626 - f 79 -15.5 -2.90496 | opp_overlap 2227626 2227623, overlap 2227610 2227623 CGCGCCCGCAAATCA GTCCTGCGT GGA ACGCAGGAC GATTTTGATTTGCCG BRADO2090 2227718 - 2228188 + | hypothetical protein TERM 1452 2228221 - 2228236 + F 100 -11.8 -4.73388 | CACGAGCGAACCCCA GCCGCC CACG GGCGGC TTTTTCCTCGGAGTT BRADO2091 2228370 - 2229107 + | hypothetical protein BRADO2092 2229528 - 2229241 - | hypothetical protein BRADO2093 2230176 - 2229613 - | serine acetyltransferase (fragment) TERM 1453 2229649 - 2229661 + g 71 -9.1 -3.85698 | CTGCGTCGACACTGG CTGCC GCG GGCAG TTTGTCAGCCGCGCC TERM 1454 2229816 - 2229856 + g 71 -12.3 -3.30441 | opp_overlap 2229792, overlap 2229817 CGCGGCCGATGCGCG GGCCGCGGCCGGGCAGCGC ATC GCGCCGCCCGATCGTGACG TTCTGCAGGATCGTC TERM 1455 2229817 - 2229855 + g 74 -15.8 -2.5805 | opp_overlap 2229792, overlap 2229816 GCGGCCGATGCGCGG GCCGCGGCCGGGCAGCGC ATC GCGCCGCCCGATCGTGAC GTTCTGCAGGATCGT BRADO2094 2230180 - 2230362 + | hypothetical protein TERM 1456 2231093 - 2231108 + F 74 -11.8 -3.53012 | CCTGGCTCGTCACTC CGCGGC ATGC GCCGCG TTTCCAGGGCAGGAC BRADO2096 2231400 - 2232230 + | hypothetical protein BRADO2097 2233798 - 2232308 - | hypothetical protein BRADO2098 2234435 - 2233986 - | putative Nudix hydrolase family protein; putative ADP-ribose pyrophosphatase BRADO2099 2235319 - 2234549 - | putative 3-oxacyl-ACP reductase TERM 1457 2237030 - 2237056 + G 70 -10.8 -3.53224 | ACCGCGATGGGGCGC GTGGTCGGCG CCTGCCT CGCCGGCCGC TTTGCCCGCGCGATC BRADO2102 2236193 - 2237821 + | aldehyde dehydrogenase BRADO2103 2237898 - 2238098 + | hypothetical protein TERM 1458 2238102 - 2238130 + T 70 -13.2 -2.96695 | gap 1, overlap 2238108 2238108 CTCGCGCGCTAATGC TT-CTGCGGCCGC TGCG GCGGCCGCAGCGA TCCTTTCGTCCAGCC TERM 1459 2238108 - 2238133 + T 76 -11.1 -3.72695 | gap 1, overlap 2238102 2238108 CGCTAATGCTTCTGC GG-CCGCTGCGG CGG CCGCAGCGATCC TTTCGTCCAGCCGAT TERM 1460 2238108 - 2238132 + T 74 -13.5 -2.83403 | overlap 2238102 2238108 CGCTAATGCTTCTGC GGCCGCTGCGG CGG CCGCAGCGATC CTTTCGTCCAGCCGA BRADO2105 2238597 - 2238367 - | hypothetical protein TERM 1461 2238863 - 2238893 + G 82 -6 -4.82901 | overlap 2238864 2238865 TCAAGACCCATGAGG ATGTGCTGCTCGTC ATC GACGTGCAGAACGA TTTTTGTCCGGGCGG pncA 2238829 - 2239464 + | nicotinamidase/pyrazinamidase BRADO2107 2241050 - 2239497 - | putative hydantoinase A TERM 1462 2239851 - 2239821 - G 76 -14.7 -3.21099 | gap 1, opp_overlap 2239825 2239833 CGCCGGCACGAGGAA CGCGCCGCCGC-CG ACCG CGAGCAGCGGCACG TCGCCGGCCTCGGTC BRADO2108 2242187 - 2241051 - | hypothetical protein BRADO2109 2243312 - 2242224 - | sperimidine/putrescine ABC transporter ATP-binding protein TERM 1463 2242442 - 2242456 + g 79 -3.4 -5.00616 | overlap 2242434 2242443 CATCGGACGGTGCGG CCGCGG ACA CCGTGA TTTTTTCGGGCCGCA BRADO2110 2244373 - 2243309 - | putative spermidine/putrescine-binding periplasmic protein BRADO2111 2245233 - 2244388 - | putative ABC spermidine/putrescine transporter permease protein BRADO2112 2246150 - 2245275 - | putative ABC spermidine/putrescine transporter permease protein BRADO2113 2246932 - 2246150 - | IclR family transcriptional regulator BRADO2114 2250625 - 2247086 - | putative isoquinoline 1-oxidoreductase TERM 1464 2249806 - 2249780 - G 79 -16.6 -3.06183 | TGGATTGGCACGCAA CGCGGTCTCGAC ATC GTCGAGATCGCG CAAGGTCGGCACGGG TERM 1465 2249911 - 2249894 - G 71 -9.1 -3.88291 | GACGACGCCGATAAA GTCGCCG ATCA CGACGAC GTCGACCAGGCCGGG BRADO2115 2251107 - 2250625 - | putative isoquinoline 1-oxidoreductase BRADO2116 2251382 - 2252830 + | hypothetical protein BRADO2117 2252869 - 2253714 + | hypothetical protein BRADO2118 2253757 - 2254341 + | hypothetical protein BRADO2119 2254353 - 2255570 + | putative branched-chain amino acid ABC transporter, periplasmic substrate-binding protein TERM 1466 2255580 - 2255620 + F 84 -16.2 -3.03441 | gap 1 GACTGATCTACTTCC TGCCTC-CCCCGCCCGC GGGGGAGA GCGGGCGGGGTGAGGGA TCTTGACGCCTGATC TERM 1467 2256630 - 2256601 - g 77 -12.1 -3.72576 | gap 1 CTGTTCGGCAGGAAA GAGGCGCCGGCGCG CCG CACGCCGG-GTCTC ACCGTCATTCCCTGG TERM 1468 2257106 - 2257087 - g 70 -4.2 -4.56597 | gap 1, opp_overlap 2257087 2257068, overlap 2257089 CTTTGGCCGGAAAAA TG-GGCGGC CTC GCCGTCGCA TTTCTACTGGCTGGC BRADO2120 2255737 - 2257623 + | putative high-affinity branched-chain amino acid transport system permease protein livM livG 2257620 - 2258411 + | high-affinity branched-chain amino acid ABC transporter ATP-binding protein TERM 1469 2258652 - 2258669 + G 71 -3.4 -4.57569 | gap 1, overlap 2258634 CCGGTCTCGGCTACG TGC-CCG AGGAG CGGCGCA TTTTTACCGACCTGA livF 2258408 - 2259112 + | putative high-affinity branched-chain amino acid transport ATP-binding proteinputative BRADO2123 2259126 - 2259641 + | MarR family transcriptional regulator TERM 1470 2259711 - 2259760 + T 91 -9.2 -4.41494 | gap 2, opp_overlap 2259673, overlap 2259725 CCAGGACCGCATCTG CC-AACGGTGGGCA-CGCGCCGCC TGAC GGCGCCGCTTTGCCCACCCTACGG TTTTGGTTCGCGGTA TERM 1471 2259725 - 2259744 + T 70 -10.6 -3.53811 | opp_overlap 2259673, overlap 2259711 GCCAACGGTGGGCAC GCGCCGCC TGAC GGCGCCGC TTTGCCCACCCTACG BRADO2124 2261320 - 2260124 - | putative aminohydrolase BRADO2126 2261581 - 2262462 + | hypothetical protein TERM 1472 2262622 - 2262634 + F 75 -3.3 -4.83615 | opp_overlap 2262607, overlap 2262605 2262604 TGGAACCAGCGACCG GCGGT TCC ACGGC TTTTTATCCCGACTG TERM 1473 2262835 - 2262888 + G 73 -3.7 -4.59773 | gap 1, overlap 2262816 2262837 2262839 GGCACGATTGTTTGC GCCGCGTTGCTCGTGGGCA-CTGAGG CGA CTGCAGGTGCCTATGAGCCGGGTGAC TTTTTCAGGCTCGAC BRADO2127 2262805 - 2263242 + | putative signal peptide dkgB 2263425 - 2264246 + | 2,5-diketo-D-gluconate reductase B TERM 1474 2264280 - 2264297 + T 81 -12.7 -3.74077 | opp_overlap 2264280 CTCTGCGCAGAAAAA TGGCCCC TCGC GGGGCCA TTTCCATCTCTGCGG TERM 1475 2264297 - 2264280 - T 100 -12.7 -4.82901 | opp_overlap 2264280 CTCTGCGCAGAAAAA TGGCCCC TCGC GGGGCCA TTTCCATCTCTGCGG BRADO2129 2264531 - 2264319 - | putative signal peptide BRADO2130 2265127 - 2264678 - | putative signal peptide BRADO2131 2265288 - 2266580 + | putative aminohydrolase BRADO2132 2267831 - 2266593 - | putative 2-aminoadipate transaminase TERM 1476 2267887 - 2267905 + H 76 -8.9 -4.17048 | ACAGATACCAGGGTG CTTGTCC CGGCT GGACAAG TTCTTTTCCCGGGGA BRADO2133 2268010 - 2269086 + | putative GTP cyclohydrolase II, riboflavin biosynthesis gcdH 2269151 - 2270365 + | glutaryl-CoA dehydrogenase BRADO2135 2270556 - 2271470 + | putative Beta-lactamase BRADO2137 2271721 - 2272935 + | phosphatase TERM 1477 2273042 - 2273060 + T 73 -11 -3.65201 | CCGGTGACTGCTGTC GTGGCGTC GAC GACGCTAC TTCTTCACCGTCTTC BRADO2138 2273935 - 2273057 - | hypothetical protein BRADO2139 2275373 - 2274168 - | ABC transporter periplasmic substrate binding protein TERM 1478 2275513 - 2275488 - R 100 -19.7 -3.76125 | TCACCGGAACGCAAA CGGCCCCCGCG TGGT CGCAGGGGCCG TGAGTCACGCGCGGA alkK 2277170 - 2275542 - | putative acyl-CoA synthetase BRADO2141 2277341 - 2278417 + | hypothetical protein TERM 1479 2278511 - 2278531 + T 86 -15.4 -3.5393 | opp_overlap 2278511 GCGCCCAAACAAAAA GGCGCCGG GGTGA CCGGCGCC TTTGGAAAGGGTGAT TERM 1480 2278531 - 2278511 - T 100 -15.4 -5.27335 | opp_overlap 2278511 GCGCCCAAACAAAAA GGCGCCGG GGTGA CCGGCGCC TTTGGAAAGGGTGAT BRADO2142 2279268 - 2278588 - | putative ErfK/YbiS/YcfS/YnhG precursor; putative signal peptide TERM 1481 2278642 - 2278654 + g 70 -10.5 -3.65046 | CATTTGCGGCTTGTA GGGCG AAT CGCCC TTCTTCGGATCCAGG TERM 1482 2280216 - 2280230 + G 77 -7.8 -4.42062 | AGCCTGGTCTCGATC GGTCGC CTC GTGACC TTTCTTTCCGCCGTC BRADO2143 2279613 - 2280590 + | putative magnesium/cobalt transport protein TERM 1483 2281181 - 2281203 + G 71 -14.8 -2.62263 | CCGCCTGCGCTGGCG CGCCGCGCAG ATC CTGCGCGGCC TGGTGTGCGAAGGCT BRADO2144 2281017 - 2281220 + | hypothetical protein fixR1 2282377 - 2281658 - | short-chain dehydrogenase pdxH 2283199 - 2282549 - | pyridoxamine 5'-phosphate oxidase TERM 1484 2283280 - 2283323 + H 75 -12.4 -3.59583 | gap 1, overlap 2283281 GCCCTATATAGGGTA TCGGT-CCGGCTTGGCCTATC CGC GATCGGTCATGCCGGCACCGC TTTGACACTCATTCT TERM 1485 2283281 - 2283322 + H 78 -15.9 -2.75268 | gap 1, overlap 2283280 CCCTATATAGGGTAT CGGT-CCGGCTTGGCCTATC CGC GATCGGTCATGCCGGCACCG CTTTGACACTCATTC BRADO2147 2283325 - 2283729 + | putative signal peptide BRADO2148 2283842 - 2284804 + | putative heat shock protein DnaJ BRADO2149 2286081 - 2285308 - | putative anti-sigma factor TERM 1486 2286147 - 2286159 + r 71 -4.7 -4.4009 | CTTGGGCAGGCGAAC GCGGC AGA GCGGC TTTTGTACGGTGAAC BRADO2150 2286670 - 2286182 - | ECF family RNA polymerase sigma factor fabI 2286872 - 2287705 + | enoyl-(acyl carrier protein) reductase BRADO2152 2287718 - 2288317 + | putative phosphoglycerate mutase aroC 2288434 - 2289519 + | chorismate synthase TERM 1487 2289772 - 2289798 + G 75 -9.4 -4.13014 | CGGCCCGGCGCGGAG GTCGTGGTCAAC TCG GTTGACTTCGGC TTTTCGGAATCTGAG BRADO2154 2289562 - 2290749 + | putative adenylate/guanylate cyclase clpS 2291106 - 2290759 - | ATP-dependent Clp protease adaptor BRADO2156 2291369 - 2292148 + | hypothetical protein BRADO2157 2292467 - 2293039 + | hypothetical protein BRADO2158 2294380 - 2293145 - | putative RNA methyltransferase BRADO2159 2295122 - 2294373 - | putative rRNA methylase TERM 1488 2295201 - 2295175 - R 100 -22.4 -3.53012 | GTCGTCCCGGCGAAA GCTCCAACGCGC ATC GCGCGTTGGAGC GCCGACCCGGGATCC TERM 1489 2295458 - 2295476 + r 75 -11.6 -3.5393 | opp_overlap 2295407 AAGGGCGGTGGGCAC GCGTCGCC TTC GGCGCCGC TTTGCCAACCCTACT BRADO2160 2296044 - 2295490 - | putative nucleoside 2-deoxyribosyltransferase dxs 2298001 - 2296076 - | 1-deoxy-D-xylulose-5-phosphate synthase TERM 1490 2296734 - 2296698 - G 100 -19.3 -3.33696 | GCGTTGTCGAACGAA CCGGCATGGGTGGCGCC GTC GGCGCCGACCAGGCCGG CGCGGTCGATCGCGA TERM 1491 2298838 - 2298859 + r 73 -10.9 -3.54424 | opp_overlap 2298822, overlap 2298849 CGCTCGGTCACGACT GCGTCTTGC CAGC GCAAGATGC TTTCACGAGATCGCA xseB 2299383 - 2299132 - | exodeoxyribonuclease VII small subunit BRADO2165 2300412 - 2299483 - | putative deacetylase BRADO2166 2302215 - 2300524 - | putative 5'-nucleotidase TERM 1492 2300821 - 2300861 + g 74 -16 -2.62184 | GATTTGCAGGATTCG TGGCCGCGCCGGATCGGC CCACT GCTGCTCCAGCGCGGCCC TGATGTCGGCCCCCG BRADO2167 2302341 - 2303213 + | putative Beta-lactamase solA 2304401 - 2303217 - | N-methyltryptophan oxidase TERM 1493 2304409 - 2304425 + r 83 -7.9 -4.57882 | opp_overlap 2304388, overlap 2304410 TGCGCCATGCCCGTT CGACGGC CCC GCCGTCA TTTCTTCTTCTTGCG BRADO2169 2305187 - 2304423 - | putative enoyl-CoA hydratase BRADO2170 2305792 - 2305418 - | hypothetical protein BRADO2171 2306337 - 2305789 - | hypothetical protein TERM 1494 2306156 - 2306177 + g 70 -10.2 -3.72695 | ACGTCCATATTGCTG TCGTCGAG CTCGTC CTCGACGA TTTGATAGGACGACT katN 2306618 - 2307886 + | non-heme manganese-containing catalase TERM 1495 2307897 - 2307924 + T 88 -16.4 -3.28712 | gap 1 CGTGACGAGGGTGCA GGGCGGATGATCG CAG CG-TCATCCGCCC TTGTCCCAGGGGAAG BRADO2175 2309024 - 2308809 - | hypothetical protein BRADO2176 2309498 - 2309268 - | hypothetical protein BRADO2177 2309503 - 2309724 + | hypothetical protein BRADO2178 2310014 - 2310757 + | hypothetical protein TERM 1496 2311149 - 2311179 + T 73 -12.5 -3.14564 | gap 1 TGCTTTTTGTTTGCA GG-CGGGCCATGGC CTCA GCCGAGGCCCGGCC TTCCTCGCGCCCTCC BRADO2179 2313263 - 2311485 - | putative acyl-CoA dehydrogenase BRADO2180 2314022 - 2315155 + | hypothetical protein BRADO2181 2315145 - 2315507 + | WD-40 repeat-containing protein TERM 1497 2315537 - 2315515 - T 71 -9.1 -3.73647 | CGGATTGACCAATAA GGGCCGG GTGCGCTCG CCGGCCC GACGGCAGCGCAGAA BRADO2183 2317417 - 2315597 - | hypothetical protein TERM 1498 2316448 - 2316434 - G 74 -5.6 -4.56597 | overlap 2316435 GCTCTGCTCCAAAAA GCGCTC CTC GAGCGT CGGCAGCCCGCTTGG fcl 2318512 - 2317556 - | bifunctional GDP-fucose synthetase: GDP-4-dehydro-6-deoxy-D-mannose epimerase; GDP-4-dehydro-6-L-deoxygalactose reductase gmd 2319551 - 2318493 - | GDP-D-mannose dehydratase, NAD(P)-binding, colanic acid synthesis BRADO2186 2320575 - 2319736 - | hypothetical protein TERM 1499 2320786 - 2320762 - R 83 -15.8 -3.1247 | opp_overlap 2320783 AGGGCGCAGATGTAA GGTGGACGGA TCGCC TCCGTCCACC TCGACCCGATGCGTT BRADO2187 2321745 - 2320804 - | hypothetical protein BRADO2188 2322033 - 2321860 - | hypothetical protein BRADO2189 2322720 - 2322124 - | putative peptide signal BRADO2190 2323401 - 2322904 - | TPR repeat-containing protein TERM 1500 2323282 - 2323272 - G 79 -8.2 -4.30576 | overlap 2323274 TGGCGATCAGCAAAA CGCC GGC GGCG CGAAAGTCGCCGTGT BRADO2191 2325768 - 2323432 - | putative general secretion pathway protein D; putative signal peptide TERM 1501 2323541 - 2323520 - G 75 -4.3 -4.63218 | opp_overlap 2323520, overlap 2323522 TCCTCGGCAACAAAA TTGGCGTCG ACGC CGTCGCGAA TGATCTGCGGGCGGA TERM 1502 2324915 - 2324930 + g 79 -3.2 -5.03314 | TGTGAAACGCCACCT TCACCG GAAT CGATGA TTTTTTCGAGCTCGG TERM 1503 2325005 - 2324985 - G 81 -5.4 -4.8048 | gap 1 TCTGCACAGGAAAAA TGC-CGACC GACT GGCCGCGCA TCCAGTCCATGTCGA TERM 1504 2325821 - 2325839 + H 76 -8.1 -4.12456 | gap 1, opp_overlap 2325819 CGTTGAGCACAGACG GCGAGGCC GAAT GGCC-CGC TTTTAGCCATGGTCT BRADO2193 2326031 - 2326519 + | putative general secretion pathway protein H TERM 1505 2326671 - 2326709 + G 72 -14.4 -3.05596 | CTCGTCGCGACGGTC AGGTTGGTCGGCGCGGGG CTC CCGCGCGCCGGCGAGCCA TTGCCTCAGCAACTC BRADO2194 2326497 - 2326895 + | putative general secretion pathway protein I; putative signal peptide BRADO2195 2326892 - 2327596 + | putative general secretion pathway protein J BRADO2196 2327593 - 2328525 + | putative general secretion pathway protein K BRADO2197 2329764 - 2328505 - | hypothetical protein BRADO2198 2330527 - 2329823 - | hypothetical protein TERM 1506 2330396 - 2330386 - G 70 -2.4 -4.57569 | TCAGGTTGTGAAAAA TGGC CTT GCCC GACATGGACCTGACG BRADO2199 2331357 - 2330797 - | hypothetical protein TERM 1507 2332323 - 2332377 + G 83 -8.3 -4.66833 | gap 1, overlap 2332312 2332307 2332325 GCTGCCGGCGCTCGC GACCGCCGCCG-GTCTGCTCGCCGCG GCGT CGTTGCCCGCAGACACGGCAGGGGCC TTTTTGGGATTGGCG BRADO2200 2331814 - 2333100 + | putative permease protein; putative membrane protein BRADO2201 2334478 - 2333192 - | glycosyl transferase TERM 1508 2333718 - 2333697 - G 77 -10.9 -3.8901 | gap 1, overlap 2333689 2333701 CCGCAAAGCACGAAA TGCAGCGAGC AGC GCTCGC-GCA GGCTGGCAGCCATGT TERM 1509 2334707 - 2334724 + r 76 -12.7 -3.53012 | ATCGTCGAGATGGAC CGTGCCG GAGT CGGCACG TTTACACCGCAGCGG BRADO2202 2335700 - 2334726 - | putative aldo/keto reductase BRADO2203 2337436 - 2335697 - | hypothetical protein BRADO2204 2337731 - 2338750 + | hypothetical protein TERM 1510 2339208 - 2339223 + G 85 -5.4 -5.0133 | gap 1 CAGCTTCATCATCTA CGCG-CA GTA TGTCGCG TTTTTTCCGCAGCTC BRADO2205 2338750 - 2340183 + | putative alginate o-acetyltransferase AlgI BRADO2206 2341206 - 2340247 - | S-adenosyl-L-methionine-dependent methyltransferase BRADO2207 2343014 - 2341215 - | putative carbamoyltransferase family protein TERM 1511 2341353 - 2341371 + g 73 -6.6 -4.41494 | GGCGGCCTGCTGGGG CGTGTCGA CGA TCGGCTCG TTTTCGTTGAAGCTG TERM 1512 2342585 - 2342565 - G 79 -4.6 -4.77165 | overlap 2342567 GCCGTCATAAGAAAA TCCGGCGG TGAGG CCGTCGAA TGGCGAGCAATAATA BRADO2208 2345385 - 2343193 - | hypothetical protein TERM 1513 2344136 - 2344116 - G 71 -13.9 -2.84325 | opp_overlap 2344113, overlap 2344113 2344111 TGCCTTCAAAGATGA CCCGGCGCG ATC CGCGCAGGG CGTAGTTGCCGTCGC BRADO2209 2346319 - 2345408 - | putative glycosyl transferase, group 2 family protein TERM 1514 2346257 - 2346233 - G 71 -15.1 -2.50016 | overlap 2346232 2346215 2346230 GTCGATCACGAAGAT CTCGGTCGCAA TCT TTGCGACCGAA GCGAGCGCCCTGACA BRADO2210 2347312 - 2346386 - | putative peptidylprolyl isomerase TERM 1515 2346602 - 2346617 + g 83 -4.6 -4.98531 | overlap 2346603 GCCGGTCTTGATCAG CGGCGA AATG TCGCCA TTTTTCATTTCGAAG BRADO2211 2347669 - 2349180 + | putative phosphatase; putative signal peptide TERM 1516 2349221 - 2349252 + F 100 -15.9 -4.37157 | overlap 2349224 CTTCAGCTCAGACCT CGGTACGCCCGGC CGAATA GCCGGGCGTATTG TTTGTTGTGGTCCTT TERM 1517 2349224 - 2349249 + F 100 -16.2 -4.29119 | overlap 2349221 CAGCTCAGACCTCGG TACGCCCGGC CGAATA GCCGGGCGTA TTGTTTGTTGTGGTC TERM 1518 2351786 - 2351774 - g 86 -9.1 -4.65895 | GGTTCTATCGAAAAA CGTGC TCG GCACG GAGTCGACCACCGGG TERM 1519 2353730 - 2353706 - g 70 -9.9 -3.72893 | opp_overlap 2353706 CACCTTGGCAGGAAA GGCGGGGAGCA TCG CGCTCTCCACC TATCTGGGTACATGG TERM 1520 2356564 - 2356585 + G 78 -13.7 -3.49475 | gap 1, opp_overlap 2356562 GGCATGGACAGTACG CCGG-GGGCG ATG CGCCCGCCGG TTATCTGGCGCTCGA TERM 1521 2359472 - 2359484 + G 79 -3.3 -5.04385 | CAACGGCGTGCAAGT CCTGC CAG GCAAG TTTTTTGGCAATGTG TERM 1522 2362365 - 2362394 + G 72 -14.3 -2.98015 | gap 1, opp_overlap 2362365 2362364 ACCGGCACCAGCAAT GCCGGCGCTCTGCA AAT TGCAG-GCCCCGGC TATCTGGTGGTTCAG BRADO2213 2350647 - 2363810 + | Purtative large exoprotein involved in heme utilization or adhesion BRADO2214 2364167 - 2363862 - | hypothetical protein TERM 1523 2365241 - 2365255 + G 75 -11.4 -3.68738 | GTCACGATCTTCGAG GCCACC GCC GGTGGC TTATATATTCCGCTC BRADO2217 2365040 - 2366146 + | putative capsule polysaccharide export outer membrane protein precursor BRADO2218 2366200 - 2367411 + | putative glycosyl transferase BRADO2219 2367646 - 2367365 - | hypothetical protein BRADO2221 2368103 - 2368300 + | hypothetical protein BRADO2222 2368444 - 2369148 + | transglycosylase TERM 1524 2369390 - 2369415 + T 77 -12.5 -3.58343 | TTTCGCCTCGACCCG GGCCGCGGTGG TGCC TCACCGAGGCC TTTGCCGATCATGCG BRADO2224 2370214 - 2369462 - | RNA polymerase ECF-subfamily sigma-70 factor BRADO2225 2370564 - 2372258 + | putative signal peptide;putative hemolysin activation/secretion protein TERM 1525 2373748 - 2373727 - g 82 -11.5 -4.14945 | opp_overlap 2373726, overlap 2373728 CCAAGAAGAAGGAAA CGCGAGCGC TGCA GCGCTCGCC GCTGTTCCGACTGTT TERM 1526 2373747 - 2373728 - g 74 -15 -3.07882 | opp_overlap 2373726, overlap 2373727 CAAGAAGAAGGAAAC GCGAGCGC TGCA GCGCTCGC CGCTGTTCCGACTGT BRADO2226 2372259 - 2374214 + | biopolymer transport protein ExbB/TolQ family BRADO2227 2374219 - 2374623 + | biopolymer transport protein ExbD/TolR family BRADO2228 2374620 - 2375372 + | hypothetical protein BRADO2229 2375405 - 2377300 + | putative signal peptide BRADO2230 2377302 - 2377895 + | putative signal peptide BRADO2231 2377892 - 2378917 + | putative peptidylprolyl isomerase BRADO2232 2379127 - 2380596 + | putative UDP-glucose lipid carrier transferase; putative membrane protein BRADO2233 2380864 - 2381205 + | putative transposase BRADO2234 2383721 - 2381364 - | putative exopolysaccharide polymerization protein BRADO2235 2385734 - 2383899 - | putative carbamoyltransferase family protein TERM 1527 2384494 - 2384527 + g 73 -15.4 -2.53015 | CGGCCCTGCATCCAG CCGACGGCTTCGC-CG GCGG CGAGCGAAGCCG-CGG TGGCTTCCAACATCT BRADO2236 2385875 - 2385744 - | putative signal peptide BRADO2237 2386351 - 2385926 - | hypothetical protein BRADO2238 2387478 - 2386357 - | hypothetical protein TERM 1528 2386780 - 2386798 + g 72 -14.6 -2.71681 | opp_overlap 2386774 CCGATACCAGTCGAG CGACGGCA TCA TGCCGTCG TCCTTGCCGCCCTTC TERM 1529 2388534 - 2388514 - R 91 -3.1 -5.40474 | overlap 2388515 2388516 AGCTCGCCAAAAAAA CCGCGGCAG CTT CTGGCGCAC GGTTACCGCCCGAGA BRADO2242 2389783 - 2388884 - | putative inosose dehydratase (2-keto-myo-inositol dehydratase) BRADO2243 2391637 - 2389799 - | putative malonic semialdehyde oxidative decarboxylase TERM 1530 2390509 - 2390527 + g 74 -8.1 -4.28656 | gap 1, overlap 2390523 GCGCCGCGGTGTCCA GCCAGGCC GTGC GGCC-GGC TTTTGCCTGTTCGGT idhA 2391869 - 2392870 + | inositol 2-dehydrogenase BRADO2245 2393488 - 2393246 - | integrase catalytic subunit TERM 1531 2393294 - 2393312 + g 76 -6.6 -4.56597 | opp_overlap 2393290 GGGTGGAGCAACAGG CGAGCGGC GGA GCTGGTCG TTTTTGCGCAGCCGA TERM 1532 2393560 - 2393583 + H 72 -13.8 -2.71712 | overlap 2393559 GGCGTGCCGCTGGCG GCCGCCGTTG AAGT CGGCGGCGGC GTTTGGGGCCGGCGC TERM 1533 2394848 - 2394873 + G 86 -9.7 -4.57837 | gap 1, overlap 2394849 TCGCCTCTGCGCTCT GCTCGA-CGGCG AGA CGCCGCTCGAGA TTTTTCGCCGGCTGT TERM 1534 2394849 - 2394872 + G 73 -13.2 -3.3422 | gap 1, overlap 2394848 CGCCTCTGCGCTCTG CTCGA-CGGCG AGA CGCCGCTCGAG ATTTTTCGCCGGCTG BRADO2247 2394066 - 2397017 + | putative oxidoreductase TERM 1535 2397088 - 2397076 - g 72 -4.7 -4.53036 | opp_overlap 2397078, overlap 2397077 2397078 TGAGAAAGATCAAAA TGCCG ATG CGGCT TCCCGCAACGCTGAT BRADO2248 2397054 - 2398055 + | putative beta-lactamase BRADO2249 2398307 - 2399368 + | hypothetical protein TERM 1536 2401362 - 2401374 + G 71 -9.1 -3.85698 | CGCTGCGCTGTTCGT GCTCG CCA CGAGC TTTCTCGGCCAGGCG BRADO2250 2399353 - 2401695 + | hypothetical protein BRADO2251 2401685 - 2402653 + | putative signal peptide BRADO2252 2403789 - 2402674 - | AraC family transcriptional regulator BRADO2254 2404292 - 2405227 + | putative transcription regulator (AraC-type) BRADO2255 2405489 - 2405995 + | hypothetical protein TERM 1537 2406220 - 2406206 - g 78 -10 -4.08216 | overlap 2406211 CCAGGGCGTGGAAAA GAGGAC GCT GTCCTC AACAGCGCTGCTGGC BRADO2256 2406120 - 2406941 + | putative cytochrome c BRADO2257 2406962 - 2408209 + | putative cytochrome c BRADO2258 2408219 - 2408395 + | hypothetical protein BRADO2259 2408392 - 2408955 + | putative cytochrome c oxidase subunit II BRADO2260 2408942 - 2410567 + | putative cytochrome-c oxidase subunit I BRADO2261 2410564 - 2411379 + | putative cytochrome c; putative signal peptide BRADO2262 2411450 - 2411632 + | transposase BRADO2263 2412664 - 2411717 - | LysR family transcriptional regulator TERM 1538 2413039 - 2413084 + G 72 -5.4 -4.37092 | gap 3, opp_overlap 2413039 2413041, overlap 2413040 2413041 GGTGGAGGAGATCAA CAGT-CGC-CGGCCCGTT-GGCG CCA CGCCGAACGCGCCGCGCGGACCA TTTTATCGCGGCGAT BRADO2264 2412812 - 2413627 + | putative catechol 1,2-dioxygenase TERM 1539 2414484 - 2414513 + G 81 -10.6 -4.07687 | opp_overlap 2414492 CTCCGCGGCCCTCGG CGGAGCAACGCC CGGCAA GGCGCTGCACCG TTTTGCGACGCAGCT BRADO2265 2413624 - 2414694 + | maleylacetate reductase TERM 1540 2414782 - 2414764 - g 72 -11.6 -3.53761 | opp_overlap 2414758, overlap 2414765 GAAGGCTTCTCGAAA CGGCCGCC GCG GGCGGCCT GCTGACGGCGACTGA TERM 1541 2414781 - 2414765 - g 72 -15.1 -2.72043 | opp_overlap 2414758, overlap 2414764 AAGGCTTCTCGAAAC GGCCGCC GCG GGCGGCC TGCTGACGGCGACTG TERM 1542 2415700 - 2415735 + G 70 -13.2 -3.06261 | opp_overlap 2415668 2415698, overlap 2415672 CCGCCGCGACGAAGC GGCCGTGGACGCAGCC GATC GGCTTCGTGCACGCCC TGTTCGAGATTGCAG BRADO2266 2414736 - 2416016 + | putative ABC transporter substrate-binding protein BRADO2267 2416020 - 2416760 + | putative branched-chain amino acid transport ATP-binding protein livF 2416760 - 2417467 + | high-affinity branched-chain amino acid ABC transporter ATP-binding protein TERM 1543 2418048 - 2418078 + G 73 -9.6 -3.91897 | GGTGGCGACCGGCAT CGCCATGGCGATCG TCG CGATCGCCGCAGTG TTTCTCGGTACCCGC BRADO2269 2417464 - 2418327 + | putative ABC transporter permease protein TERM 1544 2418425 - 2418446 + G 73 -15.1 -2.87564 | overlap 2418425 GGCGCTCATCGTCGT GGCCGGCGT GATC GCGCCGGCC TATCTGCCGCGCTCG TERM 1545 2419222 - 2419246 + G 85 -15.7 -3.64609 | overlap 2419240 2419242 GCGTCCTGATCTTCT TCGGCCTGCAG AAG CTGCTGGCCGA TTTCGGCTCATTGTA BRADO2270 2418339 - 2419400 + | putative ABC transporter permease protein TERM 1546 2420826 - 2420854 + G 72 -13.7 -3.01712 | opp_overlap 2420819 CCAGCAGACGACCTG GCCCGGCGCGCGG CTG CCGCATGCCTGGC TGTTCGGCAAGGACG tfdB 2419429 - 2421183 + | 2,4-dichlorophenol 6-monooxygenase (2, 4-dichlorophenol hydroxylase) BRADO2272 2421203 - 2422078 + | putative catechol 1,2-dioxygenase cbbR 2423195 - 2422311 - | RuBisCO operon transcriptional regulator rbcL 2423346 - 2424785 + | ribulose bisophosphate carboxylase cbbS 2424857 - 2425198 + | ribulose bisphosphate carboxylase small chain (RuBisCO small subunit) BRADO2276 2425458 - 2426909 + | putative carboxysome structural peptide CsoS2 TERM 1547 2428186 - 2428220 + G 75 -13.7 -3.27994 | overlap 2428190 CATTCTGCGCGCCCA TCACGCACC-GCACCGG CTG CCGGTGCCGGTGC-TGG TTCATATCAGGTTCG TERM 1548 2428190 - 2428217 + G 86 -17.8 -2.81725 | gap 1, overlap 2428186 CTGCGCGCCCATCAC GCACC-GCACCGG CTG CCGGTGCCGGTGC TGGTTCATATCAGGT CsoS3 2426906 - 2428438 + | carboxysome structural peptide BRADO2278 2428435 - 2428725 + | carboxysome peptide A BRADO2279 2428715 - 2428975 + | carboxysome peptide B csoS1C 2429060 - 2429368 + | major carboxysome shell protein 1C (carbon dioxide concentrating mechanism protein) csoS1A 2429484 - 2429780 + | major carboxysome shell protein 1A (carbon dioxide concentrating mechanism protein) BRADO2282 2429850 - 2430089 + | hypothetical protein BRADO2283 2430113 - 2430982 + | hypothetical protein BRADO2284 2430998 - 2432626 + | putative NADH dehydrogenase (NADH quinone oxidoreductase)(nuoL3-like) BRADO2285 2432632 - 2435157 + | hypothetical protein BRADO2286 2438456 - 2435181 - | putative transcription repair coupling factor TERM 1549 2437255 - 2437279 + g 100 -20.1 -3.31144 | opp_overlap 2437246 AGCAGATGCCGCGCC CTGCTGCCGAG TAC CTCGGCAGCAG TTATGACGATCAGCG BRADO2287 2439023 - 2438649 - | putative response regulator receiver (CheY-like protein) BRADO2288 2439227 - 2439466 + | putative chemotaxis methylesterase CheB BRADO2289 2439542 - 2439994 + | hypothetical protein BRADO2290 2440278 - 2443454 + | putative chemotaxis protein methyltransferase BRADO2291 2443541 - 2444212 + | CRP/FNR family transcriptional regulator BRADO2294 2444823 - 2444470 - | hypothetical protein BRADO2295 2445089 - 2444886 - | hypothetical protein TERM 1550 2445161 - 2445192 + H 73 -13 -3.14132 | gap 1, opp_overlap 2445159 TGTGACCGCAACAGG CGCGGCC-CGAAAGG GTT CCTGTCGCGGTCGCG TTGATCGGGGGGGCC TERM 1551 2445788 - 2445808 + G 73 -12.7 -3.37198 | overlap 2445786 CGTGGACTTCGCTGA TCAGCATGA TGT TCATGCTGA TGTTGTGTCTGACCG BRADO2297 2445748 - 2446887 + | putative uncharacterized iron-regulated membrane protein BRADO2298 2446938 - 2447126 + | hypothetical protein BRADO2299 2447661 - 2449970 + | putative ferric siderophore receptor protein precursor; putative signal peptide BRADO2300 2450108 - 2450419 + | hypothetical protein TERM 1552 2450436 - 2450480 + F 100 -17.8 -3.55622 | gap 1, overlap 2450439 2450444 GCCTTCCGATCGTCG CGGCCAGACGG-GCCGTCCGG TTTT CCGGACGGCCCCTTCCGTCCG TTTCCGAAACTTCGG TERM 1553 2450439 - 2450455 + F 70 -7.9 -4.07568 | overlap 2450436 2450444 TTCCGATCGTCGCGG CCAGACG GGC CGTCCGG TTTTCCGGACGGCCC TERM 1554 2450444 - 2450471 + F 91 -18.4 -3.11732 | overlap 2450439 2450436 ATCGTCGCGGCCAGA CGGGCCGTCCGG TTTT CCGGACGGCCCC TTCCGTCCGTTTCCG TERM 1555 2451021 - 2451035 + G 76 -6.4 -4.54047 | overlap 2451018 2451030 AGCTGATCAAGATGG TGATCG CGC CGGTCA TTTTCTGTACCGTCG dctA 2450843 - 2452162 + | C4-dicarboxylate transport protein ndh 2452418 - 2453680 + | respiratory NADH dehydrogenase 2; cupric reductase BRADO2303 2453787 - 2455649 + | two-component C4-dicarboxylate transport system, sensor protein dctD 2455662 - 2457020 + | C4-dicarboxylate transport transcriptional regulatory protein (response regulator in two-component reguatory system). TERM 1556 2457205 - 2457173 - g 72 -13.4 -3.13343 | gap 1 AGGTCAAGGACGCAA CGACGCCCCGACAGC GCGA GCAGT-GGGGCGCCG ATGTGCGCGCCGAGC BRADO2305 2457079 - 2457315 + | hypothetical protein TERM 1557 2457330 - 2457293 - T 81 -15.5 -3.09492 | opp_overlap 2457287 CGCTCAATCGCAACA CCGGCCGCCGCGACACC AAAT AGCGTCGCGACGGCCAT GCGGCTCACTTCGCC BRADO2306 2457686 - 2457336 - | hypothetical protein BRADO2307 2458153 - 2459133 + | putative ABC transporter, substrate binding protein TERM 1558 2459963 - 2459938 - g 73 -13.3 -3.30635 | gap 1, overlap 2459939 CAAATCCCTGGAGAA CGGC-GCGGCGA TCG TCGCCGCCACCG GCGGCTCGACCAACG ilvD 2459159 - 2460865 + | dihydroxy-acid dehydratase BRADO2309 2461137 - 2461982 + | putative ABC transporter, ATP-binding protein BRADO2310 2461979 - 2462755 + | putative ABC transporter, permease protein BRADO2311 2462752 - 2463513 + | putative ABC transporter, permease protein BRADO2312 2463547 - 2464593 + | hypothetical protein TERM 1559 2464649 - 2464684 + T 75 -14 -3.05844 | gap 1, opp_overlap 2464635 2464634 TCGCCCCGATGGCGG TGCGCT-CCCCTGCCCG TTG CGGGGAGGGGTATCGCA TATTGCGATGCGGAG TERM 1560 2466122 - 2466165 + T 70 -10.4 -3.53811 | gap 2, opp_overlap 2466133 2466135 CGAGATGGTGGGCAC GGCGCGAGAGACATCGTCGC GCAACG GCGATGATGTG-C-CGCGCC TTTGCCCACCCTACG BRADO2315 2467134 - 2466190 - | 3-hydroxybutyryl-CoA dehydrogenase BRADO2316 2468273 - 2467173 - | putative opine dehydrogenase BRADO2317 2469794 - 2468280 - | putative O-succinylbenzoate-CoA ligase TERM 1561 2468655 - 2468613 - G 85 -9.9 -4.21194 | gap 2 CTCGAGCACGTAAAA GTACC-CATCGGCATCA-CGC TGC GCGATGTCGCCGGTGCGGTAC CAGCCGTCGTGGATG BRADO2318 2471027 - 2469798 - | putative acyl-CoA dehydrogenase TERM 1562 2470366 - 2470334 - G 79 -16.3 -3.02263 | ACACGTCCTTGAAGA TCAGCGTGCGCGACA CGG TGCCGCGCATGCCGA GCGGGTCCCAATCGC BRADO2319 2471908 - 2471081 - | putative Alpha/beta hydrolase; putative carboxylesterase/3-oxoadipate enol-lactonase TERM 1563 2472475 - 2472457 - g 75 -11.6 -3.72576 | opp_overlap 2472457 2472428, overlap 2472458 TTGCCCGCGATGAAA GGCGGCCG CTA CGGCCGCA TCGTTGCTGTCGCGT TERM 1564 2472474 - 2472458 - g 73 -15.1 -2.83403 | opp_overlap 2472457 2472428, overlap 2472457 TGCCCGCGATGAAAG GCGGCCG CTA CGGCCGC ATCGTTGCTGTCGCG BRADO2320 2472079 - 2472840 + | putative oxidoreductase BRADO2321 2472883 - 2473719 + | enoyl-CoA hydratase BRADO2322 2473795 - 2476155 + | NADPH dehydrogenase TERM 1565 2476612 - 2476626 + G 75 -11.4 -3.6761 | overlap 2476610 TTCACCCAGGACGAG GGCGGT GTC ACCGCC TATTTCTTCGACCGC TERM 1566 2476776 - 2476791 + G 76 -6.1 -4.56597 | overlap 2476752 2476751 GCTGTGGCGCGGCGC CACCG ACTGGC CGGTG TTTTTGACCGGGCGG TERM 1567 2476946 - 2476928 - g 72 -13.8 -3.05844 | overlap 2476893 TCGGCGATGCCAACA CCGCGCCG CCG CGGCGCGA GGACTGGTCGCGACT BRADO2323 2476210 - 2477457 + | hypothetical protein TERM 1568 2477558 - 2477605 + T 71 -13.5 -2.56271 | opp_overlap 2477562, overlap 2477557 2477555 CGCATGAGTCGTAAG CCAATCCCT-CCCTCGCCTCACG CCCC CG-GAGGCGGGGGCAGGAAGTGG ATGTTGTGCTCGGCG TERM 1569 2477600 - 2477562 - T 73 -13.1 -3.17723 | gap 1, opp_overlap 2477558 2477557 2477555 TGAGTCGTAAGCCAA TCCCTCCCTCGCCTCACG CCCC CG-GAGGCGGGGGCAGGA AGTGGATGTTGTGCT BRADO2324 2478033 - 2477575 - | hypothetical protein BRADO2325 2479226 - 2478054 - | putative ABC transporter substrate binding protein BRADO2326 2479544 - 2480038 + | MarR family transcriptional regulator BRADO2327 2480214 - 2481887 + | putative acid-thiol ligase BRADO2328 2481909 - 2482352 + | hypothetical protein BRADO2329 2482437 - 2482670 + | hypothetical protein TERM 1570 2482694 - 2482652 - T 72 -14.1 -2.70932 | overlap 2482631 GTTTGCGGTCAACCA GGCGCCTGACATCGCCTGA CCGGT TCAGGCGACGCCGGGCACG ATCGCGACGACGCGG BRADO2330 2483233 - 2482676 - | putative signal peptide TERM 1571 2484020 - 2484052 + G 81 -16.2 -3.17051 | overlap 2484018 TCTTCGTGACGGCGG CGTTGGCGGCCGCG ATCGG CGCGGCAGCCGGCG TGTTCGTGGTGACGA BRADO2331 2484010 - 2484267 + | hypothetical protein TERM 1572 2484382 - 2484411 + T 81 -13.5 -3.53811 | opp_overlap 2484368, overlap 2484384 ACCGCCGGTGGGCAC GCCATCGCGCGGC TTAC GCCGCCCGATGTC TTTGCCCACCCTACG TERM 1573 2484384 - 2484409 + T 82 -14.7 -3.34715 | opp_overlap 2484368, overlap 2484382 CGCCGGTGGGCACGC CATCGCGCGGC TTAC GCCGCCCGATG TCTTTGCCCACCCTA BRADO2332 2485919 - 2484546 - | hypothetical protein TERM 1574 2485734 - 2485746 + g 74 -10.5 -3.85864 | opp_overlap 2485724 2485722 2485734 GAACAGGTCGAAGCA GGCGC CGA GCGCC TTCTTCTCGTCCTCG BRADO2333 2486884 - 2485925 - | putative ATPase TERM 1575 2486959 - 2486977 + H 85 -10.3 -4.28762 | TCCCTGGACGTTGGC GTCAGGG GAAAA CCCTGAC TTTTCCTCGCATTGT tspO 2487152 - 2487565 + | tryptophan-rich sensory protein TERM 1576 2487620 - 2487608 - f 70 -10.5 -3.53811 | opp_overlap 2487619, overlap 2487593 CGTAGGGTGGGCAAA GGCGC AAC GCGCC GTGCCCACCGGCCGT ligR 2487884 - 2488834 + | protochatechuate degradation transcriptional regulator TERM 1577 2488980 - 2488955 - f 74 -11.7 -3.52079 | GAATAGCTGATAGAA GCCCCCCGGCG CTGG CGCCGGCCGGC GCGCTCGGTCACATA TERM 1578 2490213 - 2490238 + G 78 -10.3 -4.07568 | opp_overlap 2490204, overlap 2490181 TGAACACGGCGCAGT CGTCGCTGCCG GCGC TGGCGGCGTCG TTTTACCCGACCCAG BRADO2336 2489108 - 2490484 + | MFS superfamily protocatechuate transporter ligJ 2490519 - 2491544 + | 4-oxalomesaconate hydratase ligK 2491558 - 2492253 + | hypothetical protein BRADO2339 2492257 - 2493180 + | dehydrogenase ligI 2493189 - 2494103 + | 2-pyrone-4,6-dicarboxylic acid hydrolase ligA 2494116 - 2494505 + | protocatechuate 4,5-dioxygenase subunit alpha ligB 2494506 - 2495369 + | protocatechuate 4,5-dioxygenase subunit beta ligC 2495370 - 2496329 + | 4-carboxy-2-hydroxymuconate-6-semialdehyde dehydrogenase TERM 1579 2496336 - 2496368 + T 93 -17.7 -3.28712 | opp_overlap 2496336 2496337, overlap 2496337 AAGGGTTGATATCAA CTCCTCCTCGCGCGC GGT GTGCGCGGGGAGGAC TTCTGCGGGCCGAAA TERM 1580 2496368 - 2496336 - T 74 -13.3 -3.26319 | opp_overlap 2496336 2496337, overlap 2496337 AAGGGTTGATATCAA CTCCTCCTCGCGCGC GGT GTGCGCGGGGAGGAC TTCTGCGGGCCGAAA TERM 1581 2496367 - 2496337 - T 80 -16.8 -2.5547 | opp_overlap 2496336 2496337, overlap 2496336 AGGGTTGATATCAAC TCCTCCTCGCGCGC GGT GTGCGCGGGGAGGA CTTCTGCGGGCCGAA TERM 1582 2496337 - 2496367 + T 91 -21.2 -2.57132 | opp_overlap 2496337 2496336, overlap 2496336 AGGGTTGATATCAAC TCCTCCTCGCGCGC GGT GTGCGCGGGGAGGA CTTCTGCGGGCCGAA BRADO2344 2497522 - 2496401 - | branched chain amino-acid ABC transporter substrate-binding protein BRADO2345 2498432 - 2497581 - | hypothetical protein aroE 2499299 - 2498457 - | shikimate dehydrogenase amn 2499557 - 2501041 + | AMP nucleosidase BRADO2348 2501385 - 2501062 - | putative transcriptional regulator BRADO2349 2501567 - 2502685 + | putative oxidoreductase TERM 1583 2502828 - 2502774 - T 78 -2.8 -5.08601 | overlap 2502775 2502777 2502778 GGATGCGAATAAAAA CCACGGA-GTCGGTGCACCCTCTCCC CCTGT GGGAGAGGGTGC-CGGAGATGCAAAG CATCGGAGGCGGGTG BRADO2350 2504225 - 2503062 - | putative cytochrome P450 BRADO2351 2504361 - 2505281 + | AraC/XylS family transcription factor phbH 2505417 - 2506616 + | 4-hydroxybenzoate 3-monooxygenase TERM 1584 2506667 - 2506647 - g 73 -14 -3.11192 | overlap 2506639 GACATGACGAGGGAA TCCGCGCC GCGAT GGCGCGGA TTCGAGATCCCGGCT BRADO2353 2506635 - 2508380 + | putative feruloyl esterase TERM 1585 2509458 - 2509414 - g 79 -4.8 -4.73388 | overlap 2509432 AAGCTCGAGGAAAAA GGCGGTAACGGCAAGAAGCC GAAGG AGCCTCGGGCCTCCACCACC GATCCGCAGGCGCGG BRADO2354 2508664 - 2510007 + | putative transposase TERM 1586 2510260 - 2510286 + F 91 -17.2 -3.28712 | overlap 2510258 GGGTCCCGGATCGGC GCCGTGCCGCGC TTT GCGCGTCGCGGC TTGTCCGGGACGACG BRADO2356 2511064 - 2512203 + | hypothetical protein BRADO2357 2512547 - 2512879 + | hypothetical protein TERM 1587 2513453 - 2513486 + G 75 -11.7 -3.67611 | gap 1 CCAAGGTGGTGACGC TGGTGTCGGACGTGCC GTC GTCGCG-CCGGCACCA TTATGTTGGGATCGA TERM 1588 2513766 - 2513824 + G 87 -18.6 -2.77999 | opp_overlap 2513764 2513763, overlap 2513814 CGCTCTCTATAATGT CGGCGCCGGCACGGCGGGCGTCGCCCAG GCG CTGACCGAGTCCGGCCGTGCCGGCGACA TCGTGTTCGTCGGTC BRADO2358 2512999 - 2514027 + | LacI family transcriptional regulator TERM 1589 2514065 - 2514022 - f 77 -15.3 -2.5955 | gap 1, opp_overlap 2514022, overlap 2514018 ATGCGGGACAATCTA CCGTGAGCCGGGCGGCTGCG GTTTA CGCAGCCGGCCGA-TCACGC AACGAAACGAAAGTG TERM 1590 2514346 - 2514391 + G 76 -14.9 -3.14132 | gap 3 TCCGCGCGAGGTTGC GGTGGTGCGCG-GCATC-GGCC TGTCC GGCCAGATGCACG-GCGCCACC TTGCTGGGCCGCGAC TERM 1591 2514896 - 2514853 - g 75 -13.8 -3.32844 | gap 1, opp_overlap 2514852 2514853, overlap 2514854 CGGCGCAGGCGACAA TGCCGCC-AGCGCGATCGGGC TCG GCGCGATCACGCCCGGCGACG CATTCCTGTCGCTGG TERM 1592 2514895 - 2514854 - g 80 -17.3 -2.59564 | gap 1, opp_overlap 2514852 2514853, overlap 2514853 GGCGCAGGCGACAAT GCCGCC-AGCGCGATCGGGC TCG GCGCGATCACGCCCGGCGAC GCATTCCTGTCGCTG xylB 2514143 - 2515591 + | xylulose kinase xylA 2515598 - 2516920 + | xylose isomerase rbsA 2516967 - 2517719 + | sugar (ribose) ABC transporter ATP-binding protein TERM 1593 2517836 - 2517876 + G 79 -11.1 -4.00042 | GCCTATGTGACGCTG GCGCTGGTCGCGCTCATCA TCG TGATGAGCTTCGCCAGCCC TTATTTCCTCACCGA rbsC 2517719 - 2518816 + | high-affinity D-ribose ABC transporter membrane protein BRADO2363 2518910 - 2519845 + | putative sugar (D-ribose) ABC transporter (periplasmic binding protein) TERM 1594 2519912 - 2519867 - f 82 -11.5 -4.07568 | opp_overlap 2519869 2519870, overlap 2519849 2519868 TCCTCCCGGGGAAAA CCTGGCGGTCCGGCACCCGGC TTCG GCCGGCGGCCGGGCCGCCCTT TTTGTGTGCCGCAGA TERM 1595 2519911 - 2519868 - f 78 -15 -3.04398 | opp_overlap 2519869 2519870, overlap 2519867 CCTCCCGGGGAAAAC CTGGCGGTCCGGCACCCGGC TTCG GCCGGCGGCCGGGCCGCCCT TTTTGTGTGCCGCAG TERM 1596 2519869 - 2519910 + F 100 -20.7 -4.96848 | opp_overlap 2519868 2519867, overlap 2519870 CTCCCGGGGAAAACC TGGCGGTCCGGCACCCGGC TTCG GCCGGCGGCCGGGCCGCCC TTTTTGTGTGCCGCA TERM 1597 2519870 - 2519909 + F 100 -24.2 -3.57627 | opp_overlap 2519868 2519867, overlap 2519869 TCCCGGGGAAAACCT GGCGGTCCGGCACCCGGC TTCG GCCGGCGGCCGGGCCGCC CTTTTTGTGTGCCGC TERM 1598 2520735 - 2520750 + G 75 -11.8 -3.72324 | opp_overlap 2520734 CGCACTGGACATGAT GGCGCC GCGC GGCGCC TTCTTCGTCGCGCTG BRADO2365 2520181 - 2521056 + | transcriptional regulator fabA 2521593 - 2521069 - | 3-hydroxydecanoyl-(acyl carrier protein) dehydratase BRADO2368 2522258 - 2522031 - | hypothetical protein TERM 1599 2522782 - 2522765 - g 72 -14.1 -3.07043 | CCGACGAGGCGAAGA CGGCCGC CGCC GCGGCCG AGCGCGACGCCAAAT TERM 1600 2523041 - 2522997 - g 70 -13.4 -3.07443 | gap 1, overlap 2522981 2523021 2523034 GGATACGGCAGCCAA GCTCGCCGCCGCAGCGACGAC GAAG GACGCCGCAAAGGCGGCG-GC GGCGAAGAAGTCCGA TERM 1601 2523180 - 2523159 - g 75 -12.9 -3.42503 | opp_overlap 2523155 2523154 CCGCAACACCCACAA GCCGGCGCC CGAC GGCGGCGGC GAGGTGTTCGATACC BRADO2369 2522296 - 2523657 + | hypothetical protein TERM 1602 2523671 - 2523705 + T 76 -11.5 -3.71527 | gap 2, overlap 2523674 AGCCAGCCGGGCCGG TGCG-T-GACCGCGCGC GGG GCGCGCGGTCGATCTCA TTTCGGTCGTTCAAG TERM 1603 2523674 - 2523700 + T 81 -15.8 -3.02591 | overlap 2523671 CAGCCGGGCCGGTGC GTGACCGCGCGC GGG GCGCGCGGTCGA TCTCATTTCGGTCGT BRADO2370 2524403 - 2523726 - | putative membrane protein BRADO2372 2524733 - 2525647 + | phenylacetic acid degradation-related protein BRADO2373 2526023 - 2525670 - | hypothetical protein BRADO2374 2527601 - 2526087 - | hypothetical protein BRADO2375 2527759 - 2528478 + | putative 5-amino-6-(5-phosphoribosylamino)uracil reductase BRADO2376 2528471 - 2529748 + | putative amine oxidase (flavin-containing) BRADO2377 2529875 - 2532139 + | putative phosphodiesterase-nucleotide pyrophosphatase TERM 1604 2532194 - 2532158 - T 72 -13.6 -2.77182 | gap 1, overlap 2532155 GCGCAGACTGAACGA CTACGCGACGGCCG-GC ATGT GCTCGGCCGCCGCGGCG AGGCTCGGCGCGGCC BRADO2378 2533177 - 2532158 - | LysR family transcriptional regulator BRADO2379 2533215 - 2533568 + | protocatechuate 4,5-dioxygenase subunit alpha mhpB 2533574 - 2534410 + | protocatechuate 4,5-dioxygenase subunit beta TERM 1605 2534394 - 2534424 + T 80 -6 -4.7878 | overlap 2534396 CGACCGGATTGATGG TGCTGGAGCCGGTG TAA CGGCTGCTCCAGGA TTTGTTTTCTGGATG TERM 1606 2534575 - 2534543 - T 84 -8.4 -4.52589 | gap 1, overlap 2534545 CCGCGCGATATAAAA GGTGT-CGTCCCGGC GAAC GCCGGGACCCATACC GCGGAAGCTATCGAG BRADO2381 2535032 - 2534730 - | hypothetical protein BRADO2382 2535752 - 2535063 - | hypothetical protein BRADO2383 2538943 - 2535866 - | AcrB/AcrD/AcrF family mulitdrug efflux protein BRADO2384 2540055 - 2538973 - | putative RND efflux membrane fusion protein BRADO2385 2541668 - 2540088 - | putative outer membrane efflux protein BRADO2386 2543005 - 2542046 - | hypothetical protein TERM 1607 2543070 - 2543094 + r 76 -11.5 -3.68988 | CGCGGGACCGTACGG CGATCGCGA GAAGTCG TCGCGATCG TTCTATTAGCTGAGC BRADO2387 2543844 - 2543281 - | MarR family transcriptional regulator BRADO2388 2543983 - 2545119 + | putative metal-dependent hydrolase; putative amidohydrolase BRADO2389 2545955 - 2545161 - | putative extracellular solute-binding protein dctA 2547313 - 2545991 - | C4-dicarboxylate transport protein TERM 1608 2546251 - 2546225 - G 73 -9.2 -3.99324 | opp_overlap 2546225 2546229 GGCGAGCACGACAAA GGCCGCGCCGGC GAT GCCGGCGGCTCC TTTCGATGTCACCAG BRADO2391 2548387 - 2547362 - | putative amidohydrolase; putative signal peptide TERM 1609 2547985 - 2548004 + g 75 -13.6 -3.36327 | CATTGCTCTGCGCGA TCGCGTCG GTGA CGACGCGA TTATCGGTGCCATGG BRADO2392 2549867 - 2548419 - | putative MmgE/PrpD family protein BRADO2393 2550313 - 2551545 + | acetyl-CoA acetyltransferase TERM 1610 2551602 - 2551574 - f 73 -13.1 -3.18582 | opp_overlap 2551587 GATCGCATTGATCAA CATCCGCTACGGA CGA CCCGCAGCGGGTG AGGGGCGCTTTGCGA TERM 1611 2552346 - 2552364 + G 77 -13.1 -3.53722 | CGCCGCCGCCTTCGG CGCGCCG ATCAC CGGCGCG TTCTATGCCTGTGAG TERM 1612 2552930 - 2552950 + G 80 -16.9 -2.70932 | overlap 2552946 2552949 CGATGCTCACGGGCA TGGCGACGC TCG GCGTCGCCA TCGTTGGCGGGCCAC BRADO2394 2551783 - 2553570 + | CLC-type chloride channel protein TERM 1613 2554028 - 2554067 + G 71 -15 -2.53263 | gap 1, opp_overlap 2554029, overlap 2554039 2554064 ACGAGGATGGCAGCA AGGCCGAGGCGA-CGGAGA TCT TCGCCGATCGTCTCGGCCA TCCCTTCGGCATCGC TERM 1614 2554066 - 2554029 - g 81 -16.3 -3.17212 | gap 1, opp_overlap 2554028 2554039 2554064 CGAGGATGGCAGCAA GGCCGAGGCGA-CGGAGA TCT TCGCCGATCGTCTCGGCC ATCCCTTCGGCATCG BRADO2395 2553652 - 2554980 + | putative L-sorbosone dehydrogenase cyoA 2555053 - 2555886 + | cytochrome o ubiquinol oxidase, subunit II cyoC 2555911 - 2556552 + | cytochrome o ubiquinol oxidase, subunit III cyoD 2556549 - 2556956 + | cytochrome O ubiquinol oxidase protein subunit IV TERM 1615 2556976 - 2557019 + T 74 -11.6 -3.53012 | gap 1, opp_overlap 2556989, overlap 2556978 2556979 GTCTTGCTCGGTGCG TAGGGTGGGCAAAGCGACGCC GCA GGCGGCGCG-TGCCCACCATC TTTCAGCGCACGCGG TERM 1616 2556978 - 2557017 + T 82 -14.2 -3.34398 | gap 1, opp_overlap 2556989, overlap 2556976 2556979 CTTGCTCGGTGCGTA GGGTGGGCAAAGCGACGCC GCA GGCGGCGCG-TGCCCACCA TCTTTCAGCGCACGC TERM 1617 2556979 - 2557016 + T 86 -17.7 -2.60496 | gap 1, opp_overlap 2556989, overlap 2556978 2556976 TTGCTCGGTGCGTAG GGTGGGCAAAGCGACGCC GCA GGCGGCGCG-TGCCCACC ATCTTTCAGCGCACG TERM 1618 2557007 - 2556989 - T 75 -11.6 -3.53811 | opp_overlap 2556979 2556978 2556976 CGTAGGGTGGGCAAA GCGACGCC GCA GGCGGCGC GTGCCCACCATCTTT BRADO2399 2557905 - 2557114 - | putative signal peptide TERM 1619 2557366 - 2557390 + g 71 -9.3 -3.78934 | gap 1 GCGGTCGGCGCGGCA GGA-GGCGCC GAGCAG GGCGCCGTCC TTCTTGTCGGCGCGG HtrA 2558034 - 2559068 + | serine protease DO-like precursor TERM 1620 2559126 - 2559152 + F 75 -13.7 -3.02511 | opp_overlap 2559125 GGCCGTGCAATGCAC CGCCCTCTCCC CTTGT GGGAGAGGGCA TGTTCGGCCCATCGG TERM 1621 2560150 - 2560181 + F 81 -7.2 -4.4078 | gap 1, overlap 2560150 2560151 AGAGTAGCCGGTGAT TGTG-GGTCCCGGGT CAA GCCCGGGACGACACC TTTTAGTTGGCGCGA BRADO2402 2560481 - 2561167 + | putative isochorismatase BRADO2403 2561253 - 2562908 + | hypothetical protein BRADO2404 2563575 - 2563084 - | putative thiol-disulfide oxidoreductase BRADO2405 2564074 - 2563682 - | hypothetical protein BRADO2406 2564648 - 2564217 - | hypothetical protein BRADO2407 2564743 - 2565708 + | LysR family transcriptional regulator BRADO2408 2566567 - 2565791 - | putative diheme cytochrome C; sulfur oxidizing protein soxA BRADO2409 2566884 - 2566564 - | putative sulfur oxidation protein soxZ BRADO2410 2567372 - 2566884 - | sulfur oxidation protein SoxY BRADO2411 2567795 - 2567379 - | putative cytochrome c, putative soxX protein BRADO2412 2569089 - 2567809 - | sulfide dehydrogenase TERM 1622 2569143 - 2569100 - R 93 -18.2 -3.2963 | overlap 2569102 ATCATTGCGTGAGAA TAGCACGGCGGCAGCCATTG GTCC CAATGGCTGCCGCTACGCTG ATCATGCGAAGGTGA TERM 1623 2569141 - 2569102 - R 95 -20.8 -3.21593 | overlap 2569100 CATTGCGTGAGAATA GCACGGCGGCAGCCATTG GTCC CAATGGCTGCCGCTACGC TGATCATGCGAAGGT BRADO2413 2571316 - 2569145 - | isoquinoline 1-oxidoreductase beta subunit BRADO2414 2571789 - 2571340 - | isoquinoline 1-oxidoreductase alpha subunit BRADO2415 2573375 - 2571927 - | MFS family transporter TERM 1624 2572069 - 2572052 - G 71 -14.1 -2.90723 | opp_overlap 2572051 2572050 CCAGGCTGAAGCACA GCGCGGC CAGC GCCGCGC CTGTGGTCTGGCCCG TERM 1625 2573520 - 2573510 - H 73 -8.2 -4.07568 | opp_overlap 2573510 CGTTCGCGCGCAAAA CGGC GCA GCCG TTTTGAAGCAGCGCG TERM 1626 2573510 - 2573520 + H 73 -8.2 -4.07568 | opp_overlap 2573510 CGTTCGCGCGCAAAA CGGC GCA GCCG TTTTGAAGCAGCGCG BRADO2416 2573905 - 2574282 + | hypothetical protein BRADO2417 2574841 - 2574362 - | hypothetical protein BRADO2418 2574939 - 2576486 + | transcriptional regulator BRADO2419 2577321 - 2576737 - | hypothetical protein BRADO2420 2577683 - 2577504 - | hypothetical protein BRADO2421 2578204 - 2577845 - | hypothetical protein BRADO2422 2580285 - 2578489 - | hypothetical protein TERM 1627 2579804 - 2579816 + g 71 -9.1 -3.78775 | overlap 2579800 GGCTGGGTCTTGAAG CCGAG CTG CTCGG TTTCCTCGTCGCGCA TERM 1628 2580271 - 2580251 - G 72 -5.4 -4.37658 | gap 1, opp_overlap 2580258, overlap 2580253 AACTTGTCGAGAAAA GCCTGCACG CGTG CG-GCAAGC GTGGTGTCGAGCATG BRADO2423 2581263 - 2580628 - | GntR family transcriptional regulator bioB 2581419 - 2582423 + | biotin synthetase TERM 1629 2583897 - 2583923 + G 73 -14.4 -3.14132 | overlap 2583883 CTGGCGCGGGCGCGC GCGGATTTCGCC AGG GGCGAGCTCCGC TTCGTCGCGCAGGCC TERM 1630 2583959 - 2583982 + G 72 -13.2 -3.12895 | gap 1, overlap 2583957 2583956 TCACCTCGTGTTCGC CGAGCC-CGAC AAT GTCGAGGCTCG TATGTTGCTCGCCGA TERM 1631 2584395 - 2584360 - g 81 -16.2 -3.17723 | opp_overlap 2584359 2584360, overlap 2584345 TCATCGCCAAGGCAA CGACCTTTCCGGAGGC CGTC GCCGCCGGAAAGATCA GCTTTGCCGGCAACC BRADO2425 2582634 - 2584499 + | hypothetical protein TERM 1632 2584631 - 2584666 + F 72 -13.4 -2.75992 | gap 1, overlap 2584629 2584627 TTACCGGCCGTGGTG CAGCATGGCGCAATGTT TGG AGC-TCGCGCCATGCTG TCATCTTGGATAGGA BRADO2426 2584643 - 2585863 + | putative diguanylate cyclase (GGDEF) BRADO2427 2587028 - 2585958 - | putative glycosyl transferase TERM 1633 2586289 - 2586305 + g 73 -9.4 -3.99324 | AGCAGGCCGAGCGCG CCGGAG AGGAA CTCCGG TTTCTCGTGGTCGCC BRADO2428 2587452 - 2589077 + | putative fused ATP-binding/permease protein BRADO2429 2589144 - 2591345 + | hypothetical protein TERM 1634 2591501 - 2591468 - g 70 -10.2 -3.72695 | overlap 2591470 2591473 2591491 ATCCCCGCGACGAAA GAGACGCCAGCTCC GGCCAA GGAGCCGGCACCGC CGCCCTCGGTCACCA TERM 1635 2591499 - 2591470 - g 70 -11.4 -3.44848 | overlap 2591468 2591473 2591491 CCCCGCGACGAAAGA GACGCCAGCTCC GGCCAA GGAGCCGGCACC GCCGCCCTCGGTCAC BRADO2430 2591342 - 2591851 + | putative signal peptide TERM 1636 2592514 - 2592544 + G 83 -3.2 -5.19328 | overlap 2592515 GCGGCGATCATGGGG ACGTGCGGCT ATCTGCTGTCC AGCCGCGCGG TTTTTCTTGTCACCT BRADO2431 2592028 - 2593269 + | major facilitator superfamily permease fixK 2593989 - 2593282 - | transcriptional regulator FixK BRADO2433 2594515 - 2594120 - | putative two component response regulator receiver (CheY-like protein) corresponding to a FixJ-like fragment. fixJ 2595210 - 2594593 - | response regulator FixJ TERM 1637 2594937 - 2594908 - G 71 -9.3 -3.85698 | gap 1, opp_overlap 2594880 CGGCTTTTCGAGAAA GTCGACGGCGCCGA GCT TCATCGCC-TCGAC CGCAAGCGGCACGTC fixL 2596714 - 2595203 - | sensor protein TERM 1638 2596145 - 2596189 + g 86 -17.2 -3.22774 | gap 1 GCCGGCATGGCGCGA GCGGTCGGGCTCCGGCATCAG CTCG CTGACGTCG-AGGCCGACCGC TTCCTCCTCGGTGTA BRADO2436 2597155 - 2597886 + | hypothetical protein BRADO2437 2597923 - 2598348 + | hypothetical protein TERM 1639 2598438 - 2598397 - f 84 -16.7 -3.09968 | gap 1, opp_overlap 2598401 2598403, overlap 2598389 TACGGAAGTCTAAGA CCGACATCGTCCCGTACGCT CTC AGCGTGCGGGACGATGT-GC TTGCGCGGTCTGCGC TERM 1640 2598401 - 2598435 + F 100 -25.2 -2.72049 | opp_overlap 2598397 2598389, overlap 2598403 GAAGTCTAAGACCGA CATCGTCCCGTACGCT CTC AGCGTGCGGGACGATG TGCTTGCGCGGTCTG TERM 1641 2598403 - 2598433 + F 100 -22 -2.90392 | opp_overlap 2598397 2598389, overlap 2598401 AGTCTAAGACCGACA TCGTCCCGTACGCT CTC AGCGTGCGGGACGA TGTGCTTGCGCGGTC TERM 1642 2598715 - 2598738 + G 70 -11.6 -3.45742 | overlap 2598701 2598698 TTCACGCCTCGCTCG CGGCTGCCGC CAGC GCGGCGTCCG TCTTCTTCATCCTCA BRADO2438 2598528 - 2600222 + | cytochrome c oxidase polypeptide I ccoO 2600219 - 2600968 + | cytochrome-c oxidase fixO chain TERM 1643 2601042 - 2601013 - f 84 -10.7 -4.18494 | overlap 2601016 CATTGCCATCGAAAA CATCGCGTCGTCA CTCG TGACGACGCTGTG GACCCCGATCTTCTT BRADO2440 2601029 - 2601151 + | cytochrome oxidase subunit, FixQ ccoP 2601158 - 2602030 + | cytochrome-c oxidase fixP chain fixG 2602130 - 2603611 + | nitrogen fixation protein FixG BRADO2443 2603684 - 2604130 + | nitrogen fixation protein fixH BRADO2444 2604145 - 2606346 + | nitrogen fixation protein fixI BRADO2445 2606346 - 2606522 + | nitrogen fixation protein fixS BRADO2446 2607793 - 2606492 - | putative transporter TERM 1644 2606598 - 2606554 - G 90 -18.6 -3.01712 | GCCGGCCCGCCAACA GCGCC-GCGACGACCAGCACCG CCG CGATGCCGG-CGACGCAGGCGC TCCAGCCGACCCTGT BRADO2447 2608291 - 2607800 - | putative signal peptide TERM 1645 2608550 - 2608578 + H 76 -7.4 -4.2558 | TCTCGCGAAGGGCTC TCAGCAAGGATC CGGCA GAGCCTTGCAGA TTTTGGTGCCGGCTG TERM 1646 2609017 - 2609048 + G 73 -9.4 -3.90744 | gap 1, overlap 2609023 2609027 2609029 2609037 TGGTCGATCTGCCGT CACTGCTGGCGACGG GGC CCGTCGCC-GTGATG TTCTTTCGCGGCCAC TERM 1647 2609023 - 2609043 + G 73 -14.7 -2.90309 | overlap 2609017 2609027 2609029 2609037 ATCTGCCGTCACTGC TGGCGACGG GGC CCGTCGCCG TGATGTTCTTTCGCG BRADO2448 2608755 - 2609468 + | hypothetical protein BRADO2449 2610377 - 2609487 - | LysR family transcriptional regulator TERM 1648 2609944 - 2609971 + g 100 -20.6 -3.07043 | opp_overlap 2609914 ATCTCGCCGATCTCG GCGGCGATGCCG AGTT CGGCGTCGCCGC TCTTGAGATAGTCCG BRADO2450 2610586 - 2610696 + | hypothetical protein BRADO2451 2610767 - 2611918 + | hypothetical protein BRADO2452 2612160 - 2614283 + | putative receptor/sensory transducer TERM 1649 2614313 - 2614332 + T 100 -15 -5.52384 | opp_overlap 2614313 GCGCGAAATCGAAAA GCCCGGAC GAGT GTCCGGGC TTTTTTTGCTCAACC TERM 1650 2614332 - 2614313 - T 100 -15 -4.35524 | opp_overlap 2614313 GCGCGAAATCGAAAA GCCCGGAC GAGT GTCCGGGC TTTTTTTGCTCAACC glgA 2615810 - 2614440 - | glycogen synthase TERM 1651 2615940 - 2615926 - H 87 -5.6 -5.1356 | TGTCATCAACAAAAA GCGATG CCG CAGCGC CGCGAAAGGCCAAAC BRADO2455 2616194 - 2617261 + | putative formyl-coenzyme A transferase TERM 1652 2618340 - 2618366 + G 80 -17.2 -2.73364 | overlap 2618348 TCGTCGGCCTGTTCG GCGGCGGCGCGC CCT GGGCGCTGCCGC TCATTCCGATCAAGG BRADO2457 2617472 - 2618563 + | putative NAD-dependent alcohol dehydrogenase TERM 1653 2618644 - 2618603 - f 77 -15.3 -2.55544 | opp_overlap 2618602 2618607 2618611, overlap 2618607 2618611 CGAGGAGCGAATCGA CGAAGCAATCCAGAGTC TTAACCTT GGCCCTGGATTGCTTCG CTTCGCTCGCAATGA BRADO2458 2618692 - 2619771 + | putative 3-isopropylmalate dehydrogenase (leuB) BRADO2459 2621187 - 2619787 - | putative transporter BRADO2460 2623099 - 2621225 - | adenine deaminase BRADO2461 2623786 - 2623115 - | TetR family transcriptional regulator BRADO2462 2624709 - 2623897 - | enoyl-CoA hydratase TERM 1654 2624947 - 2624932 - R 75 -11.8 -3.59979 | opp_overlap 2624931 2624929, overlap 2624942 2624943 TGGGCGGACCGCAAA GGCCGG ACAA CCGGCC GTGTTGATCGATCGG BRADO2463 2625476 - 2625081 - | putative transcriptional regulatory protein. BRADO2464 2626704 - 2625484 - | LysR family transcriptional regulator BRADO2466 2627263 - 2627508 + | hypothetical protein BRADO2467 2627864 - 2628598 + | putative transmembrane cytochrome C biogenesis protein BRADO2468 2630122 - 2628608 - | putative sensor histidine kinase TERM 1655 2630327 - 2630284 - R 78 -15.2 -2.78463 | gap 1, opp_overlap 2630282, overlap 2630289 ATCGCTGTCAGCATA GGAGAGCGGCGGGC-GTGCGC CAA GCGCATTGCACGCCGATCCCC GGTTCCCTGCGGAGC BRADO2469 2631682 - 2630345 - | putative beta-lactamase BRADO2470 2631769 - 2632686 + | putative catechol 1,2-dioxygenase TERM 1656 2632750 - 2632782 + F 76 -10.5 -3.83102 | ATCGCAAATTTTGCG TGCGGCCGTGGGCCT GCG AAGCTCACGGTCGAA TTTCCTAGTCGTTTG nrtA 2633009 - 2634325 + | ABC transporter nitrate-binding protein (nrtA) TERM 1657 2634338 - 2634362 + F 100 -22.9 -2.69964 | overlap 2634335 TGATCAGGACCTCAC GCCGCGCGCTC ATC GAGCGCGCGGC TCCTCTCATTGCACG nrtB 2634431 - 2635300 + | nitrate transport permease protein (nrtB) nrtC 2635314 - 2636105 + | nitrate transport protein; ABC transporter ATP-binding protein TERM 1658 2636106 - 2636164 + F 100 -15.9 -4.46775 | overlap 2636107 GTGGAAGCGGCCTGA TGGTTGCATGACCGAGGCGGAGAGCGG CTTGA CCGCTCTCCGCCCTGGGCGACCAATCG TTTCTCTTTTCGATC TERM 1659 2636107 - 2636163 + F 91 -17.2 -3.2698 | overlap 2636106 TGGAAGCGGCCTGAT GGTTGCATGACCGAGGCGGAGAGCGG CTTGA CCGCTCTCCGCCCTGGGCGACCAATC GTTTCTCTTTTCGAT BRADO2474 2636217 - 2636621 + | putative nitric oxide dioxygenase (NOD); flavohemoprotein nasD 2636660 - 2637841 + | nitrite reductase [NAD(P)H], large subunit TERM 1660 2638153 - 2638176 + G 80 -13.8 -3.64198 | AGGCACATCGTCGCC CGCGACGGCG AGGA CGCGGTCGCG TTCTATCTCTCCGGC TERM 1661 2639620 - 2639565 - g 76 -15.3 -2.81547 | gap 1, overlap 2639618 CTTCTACACCAACGA CCGCAAGGCGCGCTTCGTCGCGCCGG AGGTG CCGGCGCTACGCAGCGAGACC-ACGG CCGCGCGACCGCTGC nasA 2637838 - 2640552 + | nitrate reductase, large subunit TERM 1662 2640568 - 2640617 + F 73 -13.1 -3.23452 | gap 1, opp_overlap 2640577 2640581, overlap 2640577 CTCGGCACCGTCGTT GCGAGCGAAGGAATCCAGAGTC CCGCGAC GGCTCTGGATTGCTTTG-TCGC TTCGCTTCTCGCAAT TERM 1663 2640577 - 2640609 + F 73 -8.5 -3.98484 | opp_overlap 2640577 2640581, overlap 2640568 GTCGTTGCGAGCGAA GGAATCCAGAGTC CCGCGAC GGCTCTGGATTGC TTTGTCGCTTCGCTT BRADO2477 2640683 - 2641531 + | putative aldo/keto reductase TERM 1664 2641619 - 2641632 + F 74 -5.9 -4.41548 | overlap 2641621 GACGGGTTGTCGCGG CGCCG TGAT TGGCG TTTTGTCGCCTCTCA BRADO2478 2641729 - 2642682 + | putative transmembrane protein BRADO2479 2642894 - 2644066 + | hypothetical protein BRADO2480 2645693 - 2644308 - | putative transmembrane component TERM 1665 2644620 - 2644600 - G 77 -12.5 -3.72576 | overlap 2644601 CCGCGCTTGAGGAAA TGCCGCAGC CAG GCTGCGGCC GAGCCGAGGCCGGAC TERM 1666 2644619 - 2644601 - G 76 -16 -2.83403 | overlap 2644600 CGCGCTTGAGGAAAT GCCGCAGC CAG GCTGCGGC CGAGCCGAGGCCGGA TERM 1667 2645689 - 2645641 - G 78 -10.2 -4.08945 | gap 1 AGCAGCTTGGGAAAA CGCCG-CCGTCGGCGCGGCAG GGGACTGT CTGGCGAAACGACGGTCGGCG GCATCGGTGAGATCG BRADO2481 2647241 - 2645988 - | putative ferredoxin--NAD(+) reductase BRADO2482 2648473 - 2647292 - | putative ferredoxin-type membrane protein BRADO2483 2649372 - 2648890 - | hypothetical protein BRADO2484 2650187 - 2649726 - | AsnC/Lrp family transcriptional regulator BRADO2485 2650247 - 2652715 + | putative dehydrogenase TERM 1668 2652784 - 2652751 - f 87 -17.5 -2.94912 | GTCTGAACGTAGATA CGCCGCCTCCTTCGC CTGG ACAAAGGAGACGGCG CTGCAACTTGGGGAC BRADO2486 2653209 - 2654639 + | aldehyde dehydrogenase TERM 1669 2654736 - 2654703 - T 86 -13.1 -3.99374 | gap 1, opp_overlap 2654713, overlap 2654672 2654704 CGCCATCAACAAGAA CGGTGGGC-ACGGCGC TCC GCGCCTTTGCCCACCC TGCGAAGCGAAGACT TERM 1670 2654735 - 2654704 - T 84 -16.6 -2.99142 | gap 1, opp_overlap 2654713, overlap 2654672 2654703 GCCATCAACAAGAAC GGTGGGC-ACGGCGC TCC GCGCCTTTGCCCACC CTGCGAAGCGAAGAC TERM 1671 2654713 - 2654725 + T 70 -10.5 -3.53811 | opp_overlap 2654672 2654704 2654703 AAGAACGGTGGGCAC GGCGC TCC GCGCC TTTGCCCACCCTGCG BRADO2487 2655719 - 2654751 - | putative gluconolactonase BRADO2488 2655893 - 2656627 + | putative UDP-glucose 4-epimerase TERM 1672 2658097 - 2658082 - g 70 -2.5 -4.62471 | gap 1 GCCAATTCCGAAAAA GCTCGC GCGCG GCG-GC ACCAAGGACATGGTG BRADO2489 2656715 - 2658433 + | dihydroxy-acid dehydratase BRADO2490 2659197 - 2658442 - | putative enoyl-CoA hydratase BRADO2491 2659378 - 2660613 + | putative ferredoxin--NAD(+) reductase BRADO2492 2661518 - 2660610 - | ribokinase BRADO2493 2662439 - 2661540 - | putative sugar kinase TERM 1673 2662549 - 2662597 + H 70 -13.1 -2.90194 | CCATGGTGGTTGAGA TCGC-CCCCTTGCAACCGGCGGC CCCCT GCCGCCGGC-GCAAGGGTCGCGC TATGGTTGCCGGCCT gdh 2662599 - 2663897 + | glutamate dehydrogenase (NAD(P)+) oxidoreductase protein TERM 1674 2663975 - 2663941 - g 80 -15.7 -3.29471 | gap 1 GCTCGAGGACATCAA GGCCG-GCAGCGCCAC GTTC GAGACGCTGCTCGGCC GCAAGCCGTCGTGGC BRADO2495 2663894 - 2664742 + | putative glyoxalase/bleomycin resistance protein/dioxygenase family protein TERM 1675 2664867 - 2664838 - f 75 -13.6 -3.00298 | gap 1, opp_overlap 2664863 CTTGCGAAGGATAGA GGCGGG-GCCTCG CCCTT CGAGACGCCCGCC TTCGGCGGTCTCCTC BRADO2496 2665212 - 2666153 + | hypothetical protein TERM 1676 2666237 - 2666188 - T 100 -23.7 -3.09635 | opp_overlap 2666196 2666200, overlap 2666192 2666196 2666200 ATTGCGAGGAGCGAA GCGACGAAGCAATCCAGGGCCGC ACGC GTGGCCCTGGATTGCTTCGCTAC GCGTAACTGCCCAGG TERM 1677 2666233 - 2666192 - T 100 -27.5 -2.55544 | opp_overlap 2666196 2666200, overlap 2666188 2666196 2666200 CGAGGAGCGAAGCGA CGAAGCAATCCAGGGCCGC ACGC GTGGCCCTGGATTGCTTCG CTACGCGTAACTGCC TERM 1678 2666229 - 2666196 - T 95 -21.1 -3.22388 | opp_overlap 2666196 2666200, overlap 2666192 2666188 2666200 GAGCGAAGCGACGAA GCAATCCAGGGCCGC ACGC GTGGCCCTGGATTGC TTCGCTACGCGTAAC TERM 1679 2666196 - 2666229 + T 100 -23.3 -3.06183 | opp_overlap 2666192 2666188 2666196 2666200, overlap 2666200 GAGCGAAGCGACGAA GCAATCCAGGGCCGC ACGC GTGGCCCTGGATTGC TTCGCTACGCGTAAC TERM 1680 2666225 - 2666200 - T 83 -14.7 -3.41581 | opp_overlap 2666200 2666196, overlap 2666196 2666192 2666188 GAAGCGACGAAGCAA TCCAGGGCCGC ACGC GTGGCCCTGGA TTGCTTCGCTACGCG TERM 1681 2666200 - 2666225 + T 91 -16.9 -3.37344 | opp_overlap 2666196 2666192 2666188 2666200, overlap 2666196 GAAGCGACGAAGCAA TCCAGGGCCGC ACGC GTGGCCCTGGA TTGCTTCGCTACGCG BRADO2497 2667715 - 2666264 - | putative transposase TERM 1682 2668316 - 2668305 - R 91 -3 -5.43866 | GAATTCTGAAAAAAA GAAA GATA TTTC TGCGACCCGGATCTA BRADO2499 2669710 - 2668481 - | putative cytochrome P450 TERM 1683 2668859 - 2668886 + g 70 -9.8 -3.65046 | CTCCTCGACGGCGGT GCGGATCAAGGC GGGG GCCTCGATCAGC TTCTTGCGCTCGGCC TERM 1684 2669494 - 2669507 + g 71 -9.5 -3.78934 | opp_overlap 2669482 2669481 AATCGCCGTATTTCG GCGCG AACT CGCGC TTCTTGTCGGACGAA BRADO2500 2669980 - 2670666 + | TetR family transcriptional regulator BRADO2501 2670668 - 2671858 + | putative RND efflux membrane fusion protein precursor TERM 1685 2671903 - 2671876 - f 84 -16.2 -3.07443 | GCACATCCGAGCCAA TGCCGGGCCGCC ACGA GGCAGCCCGGCC GGACCTCATCCGAAT TERM 1686 2672087 - 2672067 - g 77 -15.5 -3.05294 | opp_overlap 2672067, overlap 2672057 CGAAACTGTCGAACA CCGTCGTGA ACG TCACGACGG TTTATCCGGGCGCGT TERM 1687 2672067 - 2672087 + G 90 -15.5 -3.85817 | opp_overlap 2672067 2672057 CGAAACTGTCGAACA CCGTCGTGA ACG TCACGACGG TTTATCCGGGCGCGT TERM 1688 2674823 - 2674857 + G 100 -19.2 -3.92075 | ACCGGCCTGGTCCCG CTGCTGACGGCGTCGG GCG CCGGCGCCGCCAGCCG TTTCTCGATCGGCCT BRADO2502 2671940 - 2675038 + | RND family multidrug efflux protein TERM 1689 2675059 - 2675094 + T 100 -14.8 -4.23054 | gap 1, opp_overlap 2675065, overlap 2675065 TTGCCAGCCTGACGG CATCAACGGCGGTTGCC TCC GGCAGCCGCCGTTC-TG TTTTGGGTGGTCTCT TERM 1690 2675089 - 2675065 - T 89 -17.1 -3.16564 | opp_overlap 2675059 2675065 GCCTGACGGCATCAA CGGCGGTTGCC TCC GGCAGCCGCCG TTCTGTTTTGGGTGG TERM 1691 2675065 - 2675089 + T 100 -19.3 -3.97622 | opp_overlap 2675065, overlap 2675059 GCCTGACGGCATCAA CGGCGGTTGCC TCC GGCAGCCGCCG TTCTGTTTTGGGTGG BRADO2503 2676150 - 2675320 - | ABC transporter permease protein; putative dipeptide transport protein yliC 2677153 - 2676212 - | ABC transporter permease protein; putative dipeptide transport protein TERM 1692 2677162 - 2677175 + r 71 -8.1 -3.9281 | TCAGCATCTTCGGAG GCTCG TGGC CGAGC TTGTTTCCCGATCGT BRADO2505 2678777 - 2677305 - | putative ABC transporter substrate-binding protein TERM 1693 2678268 - 2678312 + g 70 -10.6 -3.55622 | gap 2 CTCGACGAATTTGTA GGGGCCGGCG-CA-GACCGGGC GCA GGCCGAACTTGTCGCCGGCCTC TTTGGCGGCCTTCGG BRADO2506 2679612 - 2678902 - | hypothetical protein BRADO2507 2681430 - 2679628 - | putative gamma-glutamyltranspeptidase TERM 1694 2681478 - 2681521 + r 87 -19 -2.55544 | gap 1, opp_overlap 2681482 2681486, overlap 2681482 2681486 2681515 CATTGCGAGCGATAG CGAAGCAATCCCGGGGC-CCA GGA TGCCGCCCCTGGATTGCTTCG TCGCTTCGCTCCTCG TERM 1695 2681517 - 2681482 - R 73 -12.6 -3.1355 | gap 1, opp_overlap 2681482 2681478 2681486 2681515, overlap 2681486 GCGAGCGATAGCGAA GCAATCCCGGGGC-CCA GGA TGCCGCCCCTGGATTGC TTCGTCGCTTCGCTC TERM 1696 2681482 - 2681517 + r 73 -12.6 -3.22388 | gap 1, opp_overlap 2681482 2681486, overlap 2681478 2681486 2681515 GCGAGCGATAGCGAA GCAATCCCGGGGC-CCA GGA TGCCGCCCCTGGATTGC TTCGTCGCTTCGCTC BRADO2508 2682543 - 2681572 - | putative ATP-binding protein of oligopeptide ABC transporter BRADO2509 2683559 - 2682576 - | putative oligopeptide ABC transporter ATP-binding protein BRADO2510 2684574 - 2683606 - | putative oligopeptide ABC transporter (permease protein) BRADO2511 2685557 - 2684577 - | putative oligopeptide ABC transporter (permease protein) TERM 1697 2685646 - 2685617 - R 100 -17.3 -4.67038 | opp_overlap 2685617 CGTGGAAAATGAAAA GTCCCGAAAAGCA GTTC TGCTTTCCGGGAC TTTGGGTCGTCGGGC TERM 1698 2685617 - 2685646 + r 90 -15.1 -3.68351 | opp_overlap 2685617 CGTGGAAAATGAAAA GTCCCGAAAAGCA GTTC TGCTTTCCGGGAC TTTGGGTCGTCGGGC BRADO2512 2687260 - 2685665 - | putative oligopeptide ABC transporter (substrate-binding protein) TERM 1699 2686727 - 2686760 + g 87 -14.5 -3.84406 | overlap 2686728 CGAGGCGTAGCTCGG CGTGGTCGCGGAGAC CGGG GTCGGCGCGACCGCG TTGTTGTCCTCGCAC BRADO2513 2687769 - 2688035 + | hypothetical protein TERM 1700 2688308 - 2688325 + G 72 -6.9 -4.25104 | ATGATCCTCTGCCAC GGCTGGC CGGA GCTGGCC TTTTCCTGGCGGCAC BRADO2514 2688194 - 2689198 + | putative epoxide hydrolase TERM 1701 2689281 - 2689254 - T 71 -8.4 -3.84451 | gap 1 TTGGTGAAAGCCAAA GGC-CGAGCCCAA CAT TCGGGGTCGTGCC GGACAAGCCTGCCGA TERM 1702 2689314 - 2689288 - T 93 -19.4 -3.28712 | overlap 2689302 GGTCGTGCCGGACAA GCCTGCCGACGC AAC GCGTCGGCGGGC GCCGATCCGGGATCC BRADO2515 2690392 - 2689472 - | hydrolase BRADO2516 2690542 - 2691333 + | hypothetical protein TERM 1703 2691376 - 2691430 + F 72 -13.7 -2.79302 | gap 1, opp_overlap 2691406, overlap 2691379 2691387 CATTATTACGATTAC GCACCCCGCAATGGTGCAATGCAACA TAAT TGTTGCGATGCACCAT-GTGGAGTGA TATGGTCGAACTACT TERM 1704 2691379 - 2691427 + F 71 -14 -2.66435 | gap 1, opp_overlap 2691406, overlap 2691376 2691387 TATTACGATTACGCA CCCCGCAATGGTGCAATGCAACA TAAT TGTTGCGATGCACCAT-GTGGAG TGATATGGTCGAACT BRADO2517 2691502 - 2691978 + | hypothetical protein TERM 1705 2692008 - 2692036 + F 84 -8.7 -4.46212 | overlap 2692002 2692013 TCAGTCGATCGCTCC TGCGAGGCCCGCT TTC GGCGGGCCTTTCC TTTTGTGATCGGGCG TERM 1706 2692013 - 2692031 + F 100 -13.8 -4.28487 | overlap 2692002 2692008 CGATCGCTCCTGCGA GGCCCGCT TTC GGCGGGCC TTTCCTTTTGTGATC paaX 2692072 - 2692953 + | phenylacetic acid degradation operon negative regulatory protein paaX TERM 1707 2693259 - 2693275 + G 72 -15.1 -2.71364 | CCGCGCGCCCAGCCT GCGCCGC AAG GCGGCGC TGCTTGCCAAGGTCC paaA 2693032 - 2694021 + | phenylacetate-CoA oxygenase subunit PaaA paaB 2694037 - 2694324 + | phenylacetate-CoA oxygenase subunit PaaB paaC 2694466 - 2695242 + | phenylacetic acid degradation protein paaC TERM 1708 2695355 - 2695400 + G 76 -14.7 -3.09492 | gap 1 CGGCGTGCTGCGCGA GGTCGAGGTGGTCGGCGACCGC GTC GAGGTCG-CGATCACGCCGACC TATTCGGGTTGCCCC paaD 2695236 - 2695739 + | phenylacetic acid degradation protein paaD TERM 1709 2695765 - 2695808 + F 100 -24 -3.06183 | opp_overlap 2695765 2695770 2695774, overlap 2695770 2695774 GTCATTGCGAGCGAA GCGAAGCAATCCAGGGCCAC GCCC GGAGCCCTGGATTGCTTCGC TTCGCTCGCAATGAC TERM 1710 2695808 - 2695765 - f 100 -26.2 -3.06183 | opp_overlap 2695765 2695770 2695774, overlap 2695770 2695774 GTCATTGCGAGCGAA GCGAAGCAATCCAGGGCCAC GCCC GGAGCCCTGGATTGCTTCGC TTCGCTCGCAATGAC TERM 1711 2695770 - 2695803 + F 83 -15.3 -3.19192 | opp_overlap 2695765 2695770 2695774, overlap 2695765 2695774 TGCGAGCGAAGCGAA GCAATCCAGGGCCAC GCCC GGAGCCCTGGATTGC TTCGCTTCGCTCGCA TERM 1712 2695803 - 2695770 - f 89 -17.5 -3.19192 | opp_overlap 2695770 2695765 2695774, overlap 2695765 2695774 TGCGAGCGAAGCGAA GCAATCCAGGGCCAC GCCC GGAGCCCTGGATTGC TTCGCTTCGCTCGCA TERM 1713 2695799 - 2695774 - f 71 -11.1 -3.40788 | opp_overlap 2695774 2695770 2695765, overlap 2695770 2695765 AGCGAAGCGAAGCAA TCCAGGGCCAC GCCC GGAGCCCTGGA TTGCTTCGCTTCGCT TERM 1714 2696538 - 2696576 + G 71 -12.4 -3.25942 | opp_overlap 2696521 GAGGCCGCCTGCCGT GCGCTCGGCATCGCCG ACGACCG CGTCCATGTCGAGCGC TTCGTCTCCGGCGCT TERM 1715 2696710 - 2696737 + G 80 -14.2 -3.66654 | gap 1, opp_overlap 2696673 AGGGCGAGGCCATTC TCGACGCCG-CGC TGC GCGCCGGTGTCGA TTTGCCGTTCGCCTG BRADO2523 2695905 - 2696918 + | putative phenylacetic acid degradation NADH oxidoreductase paaE. paaK 2698525 - 2697203 - | phenylacetyl-CoA ligase TERM 1716 2697325 - 2697350 + g 89 -18.3 -3.41051 | overlap 2697326 TGATATGGATCGAGA TGCGCTCGGCG TGCT CGCCGAGCGCG TTCTCGTCCCAATGC TERM 1717 2697326 - 2697349 + g 93 -19.6 -2.64416 | overlap 2697325 GATATGGATCGAGAT GCGCTCGGCG TGCT CGCCGAGCGC GTTCTCGTCCCAATG paaI 2699007 - 2698546 - | phenylacetic acid degradation protein TERM 1718 2699179 - 2699162 - H 71 -9.1 -3.75153 | opp_overlap 2699176 GCGCGTCAAGCGAAA GAGCTGC TTGC GCAGCCC GCGTGCCGCCGCCTC BRADO2526 2699250 - 2700296 + | hypothetical protein BRADO2527 2701708 - 2700476 - | putative hydrolase TERM 1719 2701990 - 2702011 + r 72 -12.3 -3.31792 | gap 1 ATATGATGGTGCCGT CTCGCGGCCG GTA CGGCC-CGAG TTGTGCAAATCGTCG BRADO2529 2702543 - 2702178 - | hypothetical protein TERM 1720 2702611 - 2702644 + r 85 -5.9 -5.07652 | gap 1, opp_overlap 2702625 2702630, overlap 2702614 2702615 2702625 GATAGCATGCAGTCC GTAGGGTGGGCAAAGC GAA GCGT-GCCCACCGTTC TTTTCTTTTCGGGGA TERM 1721 2702614 - 2702641 + r 76 -6.2 -4.6313 | gap 1, opp_overlap 2702625 2702630, overlap 2702611 2702615 2702625 AGCATGCAGTCCGTA GGGTGGGCAAAGC GAA GCGT-GCCCACCG TTCTTTTCTTTTCGG TERM 1722 2702675 - 2702630 - R 74 -12.7 -3.27525 | gap 1, opp_overlap 2702615 2702614 2702611 2702625 2702673 2702674, overlap 2702625 2702662 2702664 2702665 GGTGGGCAAAGCGAA GCGTGCCCACCGTTCTTTTC TTTTCGG GGAAAGA-CGGTGGGCACGA CGCTGCGCGTCTTTG TERM 1723 2702697 - 2702664 - R 72 -11.7 -3.34398 | gap 1, opp_overlap 2702625 2702673 2702674, overlap 2702630 2702625 2702662 2702665 CTTTTCGGGGAAAGA CGGTGGGC-ACGACGC TGC GCGTCTTTGCCCACCC TACAAGTCGGTTAAC TERM 1724 2702696 - 2702665 - R 77 -15.2 -2.60496 | gap 1, opp_overlap 2702625 2702673 2702674, overlap 2702630 2702625 2702664 2702662 TTTTCGGGGAAAGAC GGTGGGC-ACGACGC TGC GCGTCTTTGCCCACC CTACAAGTCGGTTAA BRADO2530 2703378 - 2702716 - | hypothetical protein kgtP 2704748 - 2703405 - | alpha-ketoglutarate permease TERM 1725 2704949 - 2704902 - R 100 -24.2 -3.53012 | overlap 2704870 2704938 TCGGCGTCGGCGAAA GCGACATCCGGGTTCACCGGCG ATAG CGCGTGAGAACCCGGATGTCGC GTCCGCCTTCGCCCT TERM 1726 2704991 - 2704938 - R 91 -17.3 -3.29829 | gap 1, overlap 2704902 GATAGCGCGTGAGAA CCCGGATGTCGCGTCCGCCTTCGCCC TTC GGGCGATGGCTCCCGCT-CATCCGGG CTACGATTTTGGTCC BRADO2532 2706433 - 2705009 - | putative amidotransferase BRADO2533 2707289 - 2706513 - | short chain dehydrogenase yeaU 2707432 - 2708520 + | tartrate dehydrogenase TERM 1727 2708876 - 2708896 + T 81 -13.9 -3.53811 | ATCGATGGTGGGCAC GCTGCCGCC TGC GGCGGCCGC TTTGCCCACCCTACG BRADO2535 2709806 - 2708922 - | putative phosphoglycerate dehydrogenase TERM 1728 2709896 - 2709931 + r 71 -13.2 -2.98942 | ACTGTTGTTCTGGCT CGAAGCGTCTCGGGCC TCAT GGTTCGAGACGCGCCG TATGTATCGACCGGT TERM 1729 2710102 - 2710049 - R 75 -4.3 -4.81551 | gap 1, overlap 2710054 CATGGAGATGAAAAA CAAGCTCGCCGCAGCCTCTCCCCTCA TCC TGAGGAGCCGCGCAGCGGCGT-CTCG AAGGATGAGGTCCCG BRADO2536 2711391 - 2710141 - | allantoate amidohydrolase TERM 1730 2711221 - 2711238 + g 74 -12.7 -3.53224 | GACGTGAACCTCCAG GCCTGCG TCCT CGCAGGC TTTCCGGAACCAGTC TERM 1731 2711303 - 2711319 + g 74 -12.3 -3.59738 | overlap 2711287 CGGCGCACGCCGCCC TTCGGCG TGG CGCCGAA TTTGGCGGTCTCGTG BRADO2537 2712350 - 2711388 - | LysR family transcriptional regulator BRADO2538 2712455 - 2713282 + | hypothetical protein TERM 1732 2713294 - 2713305 + F 72 -7.2 -4.19624 | opp_overlap 2713285 GTAGAAGCCAGCCGC GGCG CTCA CGCC TTTGTCTTCGACGTC BRADO2539 2713346 - 2714590 + | putative branched-chain amino acid ABC transporter (substrate-binding protein) TERM 1733 2714827 - 2714871 + F 71 -12.9 -3.04792 | gap 1, overlap 2714820 2714831 TCGCCAGCGGCCTGT TGATGGGCCTGCTCTACGGC CTGATT GCCGTAGGGCTGGCGC-TCA TCTTCGGCCTGATGG TERM 1734 2714831 - 2714868 + G 72 -14.8 -2.74523 | overlap 2714820 2714827 CAGCGGCCTGTTGAT GGGCCTGCTCTACGGC CTGATT GCCGTAGGGCTGGCGC TCATCTTCGGCCTGA BRADO2540 2714829 - 2715662 + | putative ABC transporter permiase component BRADO2541 2715662 - 2716666 + | putative ABC transporter permiase component BRADO2542 2716675 - 2717394 + | ABC transporter ATP-binding protein BRADO2543 2717378 - 2718082 + | high-affinity branched-chain amino acid transport protein (ABC transporter ATP-binding protein) TERM 1735 2718245 - 2718281 + T 74 -12.9 -3.28712 | opp_overlap 2718240 2718241 2718252 2718269, overlap 2718270 ACCGAGCAAAGTCGC GAGACGACGGCGCTGTG CGA TACAGCGCCCTCGCCCC TTGTGGGAGAGGGCA BRADO2544 2719410 - 2718508 - | ABC transporter permease protein BRADO2545 2720367 - 2719414 - | ABC transporter permease protein TERM 1736 2720424 - 2720386 - R 95 -21 -3.38768 | opp_overlap 2720388, overlap 2720388 2720389 GCAGATGACTGAGAA GATCTGCCGCGCCCACGA CCA TCGCGGGCGCGGCAGCTA TGGTGGTCACATCAG TERM 1737 2720422 - 2720388 - R 100 -23.6 -3.26164 | opp_overlap 2720388, overlap 2720386 2720389 AGATGACTGAGAAGA TCTGCCGCGCCCACGA CCA TCGCGGGCGCGGCAGC TATGGTGGTCACATC TERM 1738 2720388 - 2720422 + r 100 -21.4 -2.82834 | opp_overlap 2720388 2720386 2720389 AGATGACTGAGAAGA TCTGCCGCGCCCACGA CCA TCGCGGGCGCGGCAGC TATGGTGGTCACATC TERM 1739 2720421 - 2720389 - R 100 -27.1 -2.55216 | opp_overlap 2720388, overlap 2720388 2720386 GATGACTGAGAAGAT CTGCCGCGCCCACGA CCA TCGCGGGCGCGGCAG CTATGGTGGTCACAT BRADO2546 2721731 - 2720436 - | putative ABC transporter substrate-binding protein BRADO2547 2722798 - 2721761 - | putative ABC transporter ATP-binding protein TERM 1740 2723005 - 2722969 - g 100 -17.9 -4.18018 | opp_overlap 2722972, overlap 2722941 2722940 2722936 CCTGCGTATGCAAAA GGCCGGCGCGCGCCG TCTCCTC CGGCGCTCGCCGGGC TGGTGCCGCGCGATC BRADO2548 2722853 - 2723185 + | hypothetical protein BRADO2549 2723718 - 2723506 - | hypothetical protein BRADO2550 2724402 - 2723740 - | putative aldolase BRADO2551 2724532 - 2725443 + | dehydrogenase NAD(P)-binding domain-containing protein BRADO2552 2725493 - 2726245 + | putative sugar isomerase (interconverting aldoses and ketoses) BRADO2553 2726242 - 2727519 + | hypothetical protein TERM 1741 2728363 - 2728337 - g 70 -2.3 -4.59773 | gap 1, overlap 2728341 GCCGAGGCGCAAAAA GCAC-TGTTGAT CCAG ATCGACAAGCGC AGCACGGTCTCCAAC BRADO2554 2727869 - 2729962 + | putative methyl-accepting chemotaxis receptor/sensory transducer (chemoreceptor) TERM 1742 2730033 - 2730010 - f 90 -18.2 -3.10894 | opp_overlap 2730010 ATCAGGACGATCGAA GGCCGAAGCG GCAA CGCTTCGGCC TTTACCTTTCACTGG TERM 1743 2730010 - 2730033 + F 100 -18.2 -3.85909 | opp_overlap 2730010 ATCAGGACGATCGAA GGCCGAAGCG GCAA CGCTTCGGCC TTTACCTTTCACTGG TERM 1744 2731154 - 2731168 + G 70 -10 -3.69323 | opp_overlap 2731145 AAGGGAGGGCGGCGC GCGTGA ACT TCACGC TTTCGGTCATCCTCG TERM 1745 2731847 - 2731871 + G 81 -11.3 -4.15565 | opp_overlap 2731815 CCACCATCGAGGCGG CGCGTGCCGGC GAG GCCGGCAAGGG TTTTGCCGTCGTCGC TERM 1746 2732318 - 2732343 + G 100 -19.1 -4.2349 | CTCATCCATCCCGAA TGGCCGCAAGC GGAA GCTTGCGGCCA TTTTCCGTGTCGGCG BRADO2555 2730253 - 2732394 + | putative methyl-accepting chemotaxis receptor/sensory transducer precursor (chemoreceptor) BRADO2556 2732533 - 2734224 + | putative sensory transducer protein; putative signal peptide TERM 1747 2734262 - 2734285 + F 100 -18.2 -4.89966 | opp_overlap 2734255 AAAGATCATCGATCA GCCGCAAGCC TCCG GGCTTGCGGC TTTCTTTTTCGCTCT TERM 1748 2734331 - 2734345 + F 73 -3.5 -4.75776 | TTTGCAATTAACCTG CTTGG TCAAT CCAGG TTTTTAACTTGCGTT TERM 1749 2735259 - 2735304 + G 77 -3.2 -4.93296 | gap 3, overlap 2735263 2735269 GATCTCTCGGCGCAG GCCTGGGCCTCGACGCGGCAGTC TCT GATGGCCGC--CG-GGCTCGTGC TTTTTGTCCTGCTCG TERM 1750 2735554 - 2735523 - g 75 -9.2 -4.12254 | GAGGAGCAGAAAGAA GCCGAGCAGCGGGC GACG GCGCGCCGCAAGGC GGACATGCACAAGAT BRADO2557 2734608 - 2736395 + | putative methyl-accepting chemotaxis receptor/sensory transducer BRADO2558 2736464 - 2737753 + | putative signal peptide BRADO2559 2737958 - 2739664 + | putative methyl-accepting chemotaxis protein TERM 1751 2739696 - 2739715 + F 78 -7 -4.62471 | opp_overlap 2739679, overlap 2739698 CCAGGATTTTTCGGG GCGTGGCC GTCA GGCCGCCC TTTTTCGGCGTTCCG BRADO2560 2739936 - 2741564 + | putative methyl-accepting chemotaxis protein; putative signal peptide TERM 1752 2741597 - 2741628 + F 100 -18.2 -4.63932 | gap 1, opp_overlap 2741601 TCCACTCATCAGCGA CG-AACGGCGGCAAT TGC ATTGCCGCCGTTTCG TTTTGTTGAAGCCTG TERM 1753 2741623 - 2741601 - f 91 -17.8 -3.19463 | opp_overlap 2741597 CTCATCAGCGACGAA CGGCGGCAAT TGC ATTGCCGCCG TTTCGTTTTGTTGAA TERM 1754 2742477 - 2742448 - g 77 -16.4 -2.70932 | opp_overlap 2742446 2742438 GCGGGGCCGGAAGCA TGGCCGCCGCCG GGATAG CGGCGGCGGGCA TCGTGCTCTGCGGCT TERM 1755 2743125 - 2743151 + G 74 -12.3 -3.62096 | overlap 2743125 GCCACCATCGAGGCC GC-GCGTGCCGGC GAG GCCGGC-CGCGGC TTTGCGGTCGTCGCC BRADO2561 2741865 - 2743556 + | putative sensory transducer protein TERM 1756 2743858 - 2743886 + G 70 -11 -3.61178 | gap 1, overlap 2743859 CGCGCAGGAGCTTGG TGCTGTCGGCAGC CACC GCTGCCG-CAGCC TTTGGCCTCGATGCC TERM 1757 2743859 - 2743885 + G 72 -14.5 -2.76492 | gap 1, overlap 2743858 GCGCAGGAGCTTGGT GCTGTCGGCAGC CACC GCTGCCG-CAGC CTTTGGCCTCGATGC TERM 1758 2744739 - 2744749 + G 72 -6.8 -4.18018 | GACCAGATGCTGATC TGCG GTT CGCA TTTTCCATGGCCCGG BRADO2562 2743824 - 2744822 + | putative signal peptide TERM 1759 2745964 - 2745919 - g 100 -19.7 -3.53811 | gap 1 CCGAGGCCTCCGAAA CGACCGGCGCGCTT-CCAGCGC CCG GCGCTGCCAAGCGCGACGGGCG CTGAGCTCAAGCAAA BRADO2563 2744862 - 2745968 + | hypothetical protein BRADO2564 2746054 - 2746428 + | hypothetical protein TERM 1760 2746591 - 2746548 - T 74 -14.6 -2.58822 | gap 1, opp_overlap 2746547 2746544 2746543, overlap 2746506 2746547 2746545 2746590 GGCGCCAGACAATAT CGAGATTCCGGGTTCAAGGCC TGC GGCCTTGC-CCCGGAATGACG GTGCCTTGTTGACAG BRADO2565 2748128 - 2746614 - | acetyl-CoA acetyltransferase TERM 1761 2748148 - 2748165 + H 75 -14.1 -3.04032 | overlap 2748146 GTTTCCAAGCGGCAG CGGCCCG GTGG CGGGCCG TCATTGTTGTCTTGT BRADO2566 2748213 - 2749190 + | putative glutathione S-transferase TERM 1762 2749304 - 2749323 + T 91 -16.4 -3.65902 | ACCGCCGGTGGGCAC GCGCCGCC TCTC GGCGGCGC TTTGCCTACCCTACG BRADO2567 2750118 - 2749498 - | hypothetical protein TERM 1763 2750020 - 2749987 - G 79 -13.1 -3.63991 | gap 1 CATCACGTTGAAGAA CGAGAACGGCG-CGGC GTT GACGACGCCGGTCTCG CCCATGGTCGTGACC TERM 1764 2750484 - 2750447 - g 84 -14.1 -3.9461 | gap 1, overlap 2750448 2750451 GCCCGGCAACAAGAA CGGA-CCGACGGCGACGG ACT CCGGCACCGTCGGCTCCT CCTCGATCATCAACC TERM 1765 2750483 - 2750448 - g 86 -17.6 -2.96444 | gap 1, overlap 2750447 2750451 CCCGGCAACAAGAAC GGA-CCGACGGCGACGG ACT CCGGCACCGTCGGCTCC TCCTCGATCATCAAC TERM 1766 2750479 - 2750451 - g 85 -18.1 -2.71503 | overlap 2750448 2750447 GGCAACAAGAACGGA CCGACGGCGACGG ACT CCGGCACCGTCGG CTCCTCCTCGATCAT TERM 1767 2750527 - 2750507 - g 72 -5.4 -4.36411 | gap 1, overlap 2750508 CATCAACCAGCAAAA TCC-GAGCG TCAG CGCCCAGGA TCCCTCGAACATCAA BRADO2568 2750304 - 2750594 + | putative signal peptide TERM 1768 2750705 - 2750677 - T 70 -13 -2.90496 | opp_overlap 2750687, overlap 2750674 GTTTCGCGGAAAGGA GCGTCCCGGCCG GCTCA CGGCAGGGCCGC GGCACCGTTCGTGAC BRADO2569 2751524 - 2750691 - | putative hydrolase BRADO2570 2752553 - 2751693 - | putative reductase BRADO2571 2752639 - 2753433 + | enoyl-CoA hydratase TERM 1769 2753641 - 2753595 - g 78 -10 -4.07568 | gap 1, overlap 2753596 CGCCGCTCGCCAAAA GGCTACGGCGCCGCGCCCGGC CGCGCC GCCGGGCTCGACAACG-AGGC GGCCCTGATGCAGCT BRADO2572 2753469 - 2754419 + | hypothetical protein BRADO2573 2754419 - 2754805 + | hypothetical protein TERM 1770 2754837 - 2754884 + T 91 -18.7 -3.06183 | opp_overlap 2754842 2754846, overlap 2754842 2754846 CGAGGAGCGTCAGCG ACGAAGCAATCCAGACTGTTT CTGCAA AGGCAGTCTGGATTGCTTCGC TTCGCTCGCAATGAC TERM 1771 2754842 - 2754879 + T 83 -15.8 -3.19192 | opp_overlap 2754842 2754846, overlap 2754837 2754846 AGCGTCAGCGACGAA GCAATCCAGACTGTTT CTGCAA AGGCAGTCTGGATTGC TTCGCTTCGCTCGCA TERM 1772 2754879 - 2754842 - T 70 -12.1 -3.18383 | opp_overlap 2754842 2754837 2754846, overlap 2754846 AGCGTCAGCGACGAA GCAATCCAGACTGTTTC TGCA AAGGCAGTCTGGATTGC TTCGCTTCGCTCGCA BRADO2574 2755832 - 2755053 - | enoyl-CoA hydratase BRADO2575 2755999 - 2757273 + | putative acyl-CoA dehydrogenase BRADO2576 2759039 - 2757459 - | acyl-CoA synthetase BRADO2577 2760030 - 2759155 - | putative oxidoreductase TERM 1773 2759359 - 2759386 + g 73 -14.2 -3.19157 | gap 1 GAGGTTCTGCAACTC CTCCATGGTGCCG ACG CGGC-CCATGGGG TTCATCGCCTTGGTG BRADO2578 2760133 - 2760942 + | enoyl-CoA hydratase TERM 1774 2760976 - 2760997 + F 78 -14.5 -3.09635 | opp_overlap 2760947 2760976 CTCCGAAGGAGCAGA CCCGGAATC TCGA GATTCCGGG TTCGATGCTGCGCAT TERM 1775 2760997 - 2760976 - f 77 -14.5 -2.86164 | opp_overlap 2760976, overlap 2760947 CTCCGAAGGAGCAGA CCCGGAATC TCGA GATTCCGGG TTCGATGCTGCGCAT TERM 1776 2762086 - 2762049 - g 72 -11.9 -3.53444 | gap 1, opp_overlap 2762043 GGACGCGCTGCGAAA GCCCGGCACCG-TCGGGA AGG TCTCGCCCGGCGCCGAGC TGCGCTTCCTCGGCG BRADO2579 2761204 - 2762613 + | acyl-CoA synthetase ppc 2762716 - 2765517 + | phosphoenolpyruvate carboxylase TERM 1777 2765615 - 2765579 - T 75 -12.2 -3.57263 | overlap 2765581 AGGCGCACGGTCAAA TACGGCGCCCTCTCCC CTTGT GGGAGAGGGCATCGCC GGCCTCTCGGTGCAC TERM 1778 2765613 - 2765581 - T 91 -17 -3.36515 | overlap 2765579 GCGCACGGTCAAATA CGGCGCCCTCTCCC CTTGT GGGAGAGGGCATCG CCGGCCTCTCGGTGC BRADO2582 2767975 - 2766893 - | putative gluconolactonase BRADO2583 2769051 - 2768137 - | putative short-chain dehydrogenase BRADO2584 2770363 - 2769224 - | hypothetical protein TERM 1779 2770170 - 2770127 - G 75 -15.3 -2.80195 | gap 1, overlap 2770124 ATGCAGCATGAAGGA GCAGC-CGCCGACCGAGGTG CCGTC CACCCAGGTCGGCGTGATGC CGAGGTAATGACACA BRADO2585 2770781 - 2770368 - | hypothetical protein BRADO2586 2770956 - 2771306 + | hypothetical protein TERM 1780 2772469 - 2772451 - g 72 -8.8 -4.07687 | ACGCGCCGCCGAAAA TCGCCGAC CTC GCCGACGA CGCCGCCTTCGCGCG BRADO2587 2771313 - 2772665 + | amidase BRADO2588 2773439 - 2772681 - | putative penicillin-binding protein 1A TERM 1781 2773748 - 2773767 + G 73 -15 -2.87132 | GCTGTCGTCGGACGC GTGCCGCG CGCT CGCGGCAC TGTATCCGGAGGACG BRADO2589 2773608 - 2774351 + | hypothetical protein alkB 2774348 - 2775007 + | alkylated DNA repair protein AlkB BRADO2591 2776636 - 2775008 - | hypothetical protein BRADO2592 2777525 - 2776653 - | putative 2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway), bifunctional protein isomerase/decarboxylase hpcE-like. BRADO2593 2779076 - 2777538 - | putative NAD-dependent aldehyde dehydrogenase family protein; putative 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase, HpcC-like BRADO2594 2779467 - 2779069 - | putative 5-carboxymethyl-2-hydroxymuconate isomerase, HpcD-like. hpcG 2780298 - 2779492 - | 2-oxo-hepta-3-ene-1,7-dioate hydratase BRADO2596 2780409 - 2780915 + | homoprotocatechuate degradative operon repressor BRADO2597 2781084 - 2782169 + | hypothetical protein BRADO2598 2782286 - 2783065 + | putative aldolase BRADO2599 2783151 - 2784698 + | putative D-galactarate dehydratase/Altronate hydrolase BRADO2600 2785076 - 2784879 - | hypothetical protein TERM 1782 2786945 - 2786961 + G 74 -15.1 -3.01712 | opp_overlap 2786942, overlap 2786927 CGATCCGGAAGAGCG CGCGCGC ATG GCGCGCG TGTTCGACGAGGGGC TERM 1783 2787748 - 2787769 + G 74 -7.9 -4.27512 | GCCTGGTGCTGTATT GGCAGCGGC ATCC GGCGCTGTC TTATTTGTTCTCCGG BRADO2601 2785512 - 2788826 + | hypothetical protein TERM 1784 2790977 - 2790961 - g 76 -15.1 -3.13522 | overlap 2790959 AGCGCGCCATCAACA CCGCGCG CTT CGCGCGG CAGTTCGGCTATGAC BRADO2602 2788857 - 2791391 + | hypothetical protein BRADO2603 2791388 - 2792266 + | hypothetical protein BRADO2604 2792370 - 2792750 + | putative signal peptide TERM 1785 2792959 - 2792988 + T 100 -23.7 -3.28712 | overlap 2792966 2792969 GGGTCCCGGATCGGC GCTGCGCCAACGC TGTC GCGTTGGCGCAGC TTGTCCGGGACGACA BRADO2605 2794181 - 2793231 - | putative gluconolactonase TERM 1786 2793897 - 2793929 + g 77 -7 -4.56775 | gap 1, overlap 2793898 2793901 GTCGATCCGGATCGC ATTGCCGATGCTGCC GTCG GGCAGC-TCGGTGAA TTTTTCCGAGGCGGT TERM 1787 2794138 - 2794126 - G 72 -5.5 -4.3898 | ACGAGCGCGACAAAA CACGC GAA GCGTA GGGTGGGCAAAGGCG TERM 1788 2794219 - 2794259 + r 100 -19.7 -3.53811 | GCATCGCGCGCGCCG GCGACCGCGGTCGGTGG GCACGCG CCGCCTGCCGCGGTCGC TTTGCCCACCCTACG BRADO2606 2796336 - 2794291 - | hypothetical protein TERM 1789 2795650 - 2795629 - G 72 -11.5 -3.54424 | overlap 2795631 TTTCAGCGCCGGAAA GACGCCGCC TGCG GGCGGCGTG AACAGCCAGATGGCG TERM 1790 2795648 - 2795631 - G 75 -14.1 -3.35046 | overlap 2795629 TCAGCGCCGGAAAGA CGCCGCC TGCG GGCGGCG TGAACAGCCAGATGG BRADO2607 2797629 - 2796346 - | hypothetical protein TERM 1791 2797540 - 2797552 + g 70 -10.5 -3.71848 | opp_overlap 2797524, overlap 2797537 GCCGGCGCCGACCAG GGCGG TGG CCGCC TTGTTGATCCGGAAC BRADO2608 2799244 - 2797718 - | hypothetical protein TERM 1792 2799090 - 2799080 - G 79 -2.4 -5.06414 | opp_overlap 2799080, overlap 2799081 2799082 CGCCGCGAAGAAAAA GGCG ATC CGCA TCTTGTGCTGCGGAA BRADO2609 2799860 - 2799261 - | putative RNA polymerase sigma factor BRADO2611 2800669 - 2800019 - | putative transcriptional activator BRADO2612 2801211 - 2800666 - | putative RNA polymerase sigma factor BRADO2613 2802037 - 2801417 - | GTP cyclohydrolase I TERM 1793 2802148 - 2802102 - R 100 -20.1 -4.07687 | gap 1 ACCGGTCTCGCAAAA TGGCCGGGCGC-GGCCGCGCTC AGTC GAGCGCGTCCAGCGCCTGGCGA ATGGTGCGGAAGACC BRADO2614 2803464 - 2802121 - | beta amino acid--pyruvate transaminase TERM 1794 2802290 - 2802253 - G 77 -16.1 -2.70932 | opp_overlap 2802252 GCCGTCTTCGAAGCA GCGCGCCGCGCATTCGC TGCC GCGGGCGCCCGGCGCGC CGTCGCGCGGCTTGA TERM 1795 2802339 - 2802379 + g 82 -11.7 -4.07568 | overlap 2802340 GGCCGATGTTGCGGA TGTCGATCACGTGCGGGGC CTG GCGCAGCGCGTGAACGGCG TTTTCCCACAACGGA TERM 1796 2802340 - 2802378 + g 70 -13 -3.04398 | overlap 2802339 GCCGATGTTGCGGAT GTCGATCACGTGCGGGGC CTG GCGCAGCGCGTGAACGGC GTTTTCCCACAACGG TERM 1797 2802755 - 2802699 - G 74 -10 -3.76169 | gap 1, overlap 2802739 CGAAGATCAACAGAA TGCCGTTG-CGGTCGCAGATCTCGCGC AGCC GCTCGAGATAGCCGACCGGCGGCGGCA GCACGCCGCCCGAGC BRADO2615 2804428 - 2803502 - | GntR family transcriptional regulator BRADO2616 2804500 - 2805660 + | hypothetical protein BRADO2617 2805699 - 2807225 + | ABC transporter substrate-binding protein BRADO2618 2807241 - 2808185 + | ABC transporter permease BRADO2619 2808182 - 2808994 + | putative ABC transporter permease protein BRADO2620 2808991 - 2810592 + | ABC transporter ATPase BRADO2621 2812406 - 2810619 - | hypothetical protein TERM 1798 2812472 - 2812484 + G 70 -2.6 -4.68908 | overlap 2812463 GTCCGATGCAACCCT TGCG TACTT CGCG TTTCTTTTCAATCAA BRADO2622 2812428 - 2812763 + | hypothetical protein TERM 1799 2813765 - 2813730 - g 71 -12.7 -3.31133 | overlap 2813728 AGAAGGACCACAACA TGATGGTGCCGATCC TGGAGG GGATCAGGACCATCA ACAGTTATGGCATGG BRADO2623 2812799 - 2814385 + | hypothetical protein TERM 1800 2816012 - 2816024 + G 78 -10.5 -4.12188 | GCGGTGCGGATGGTC GGCCG CCC CGGCC TTTTCAGCCTGATCG TERM 1801 2816157 - 2816122 - g 71 -12.6 -3.29144 | gap 1, overlap 2816146 CCAGGTGCCCGACAA GCGCC-AGGCGGTCGCT GCG AGCAACCGTCTCGACGC CAAGCTGACCGGCGC BRADO2624 2814737 - 2817094 + | putative membrane transporter TERM 1802 2817326 - 2817348 + T 100 -19.2 -3.76373 | opp_overlap 2817326 GGTCTCAAAACAAAA CGGCCCTGAC ATC GTCAGGGCCG TTTGCATGTTCAGGC TERM 1803 2817348 - 2817326 - T 100 -19.2 -5.07652 | opp_overlap 2817326 GGTCTCAAAACAAAA CGGCCCTGAC ATC GTCAGGGCCG TTTGCATGTTCAGGC BRADO2625 2817870 - 2817376 - | hypothetical protein BRADO2626 2818365 - 2818598 + | hypothetical protein BRADO2627 2818835 - 2819710 + | putative phytoene synthase BRADO2628 2819707 - 2820546 + | putative phytoene synthase BRADO2629 2820546 - 2821793 + | putative phytoene dehydrogenase BRADO2630 2822474 - 2823124 + | hypothetical protein TERM 1804 2823161 - 2823175 + T 76 -11.4 -3.68936 | GCCTGGTTAGTTGGA GCGGAG GTC CTCCGC TTATTCAGCTTGATC TERM 1805 2823344 - 2823378 + T 81 -16.5 -2.77787 | gap 1, opp_overlap 2823344 2823350, overlap 2823350 TCCCTATCGACGCAA CGAAAACGGCCGCCCG TTGT CCGGCGGCCGTTT-CG GTTTGAGCTGATGTT TERM 1806 2823378 - 2823344 - T 84 -16.5 -3.07816 | gap 1, opp_overlap 2823344 2823350, overlap 2823350 TCCCTATCGACGCAA CGAAAACGGCCGCCCG TTGT CCGGCGGCCGTTT-CG GTTTGAGCTGATGTT TERM 1807 2823373 - 2823350 - T 100 -15.2 -4.43477 | opp_overlap 2823350 2823344, overlap 2823344 TCGACGCAACGAAAA CGGCCGCCCG TTGT CCGGCGGCCG TTTCGGTTTGAGCTG TERM 1808 2823350 - 2823373 + T 91 -15.2 -3.85165 | opp_overlap 2823344 2823350, overlap 2823344 TCGACGCAACGAAAA CGGCCGCCCG TTGT CCGGCGGCCG TTTCGGTTTGAGCTG BRADO2631 2824551 - 2823403 - | hypothetical protein ispH 2825554 - 2824586 - | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase TERM 1809 2824710 - 2824750 + g 77 -13.2 -3.53012 | gap 1, opp_overlap 2824702 TCAACGAGCACTTCG GGAGCCGAGG-CGCCGGCG GTGA TGCCGACGGCCTTGGCCCC TTTCAGCCAAACCGG TERM 1810 2825500 - 2825483 - G 89 -10.5 -4.46926 | GACGCCAGCACAAAA CCCGCGC GGCT GCGCGAG ATAGACCTGCAAGGG TERM 1811 2827160 - 2827182 + G 71 -3.2 -4.62002 | overlap 2827161 2827168 GTGCCGCTGTCGCTC GCGGCGATGG CAA CCGCTGCCGG TTTTCTGTGCTTCCT BRADO2633 2826029 - 2828617 + | putative protein export membrane protein TERM 1812 2828664 - 2828684 + T 100 -14 -5.4833 | opp_overlap 2828664 AGGAAAAAAGAAAAA GCGGCCGA TGTTC TCGGCCGC TTTTTTATTCGGTCC TERM 1813 2828684 - 2828664 - T 100 -14 -5.77571 | opp_overlap 2828664 AGGAAAAAAGAAAAA GCGGCCGA TGTTC TCGGCCGC TTTTTTATTCGGTCC BRADO2634 2829334 - 2828711 - | hypothetical protein BRADO2635 2829436 - 2830827 + | putative aminotransferase; putative ornithine aminotransferase TERM 1814 2831077 - 2831020 - T 80 -15 -3.18274 | gap 1, opp_overlap 2831028 2831033, overlap 2831000 2831037 GTCATTGCAAGCGAA GCGGCGAAGCGAAGCAATCCAGGGC TACGCAACG GCTCTGGAGTGCTTCGCTTCGCT-C GCAATGACGAAGCAG TERM 1815 2831028 - 2831070 + T 84 -16.4 -3.06183 | opp_overlap 2831020 2831037, overlap 2831033 AAGCGAAGCGGCGAA GCGAAGCAATCCAGGGCT ACGCAAC GGCTCTGGAGTGCTTCGC TTCGCTCGCAATGAC TERM 1816 2831105 - 2831089 - T 72 -12.3 -3.27298 | GCTCGCAATGACGAA GCAGCTG CTT CAGCTGC TCGTACCCATCGCGC BRADO2636 2831880 - 2831098 - | hypothetical protein TERM 1817 2831680 - 2831703 + g 70 -8.8 -3.92373 | gap 1 GAGTGCGGCCTCGAT GCGCTCG-CGC AAC GCGGTGGGCGC TTTGTAGGTCAGGTC BRADO2637 2832428 - 2831877 - | RNA polymerase sigma factor TERM 1818 2832400 - 2832369 - G 71 -14.4 -2.87344 | gap 1, overlap 2832356 GACGTCGTCGAGATA GGGCAGCGCCGCCTC GCG GAAGCGCCGC-GCCC GTTCGGGATCGTCAG TERM 1819 2832453 - 2832502 + r 100 -29.3 -3.4178 | overlap 2832490 TTCCGGTTCGGTTCG CGGCGTCACCGCCGGGGCGGCAG CTTG CTGCCGGCCCGGCCATGACGCCG TTCTCATGCCCTGGT BRADO2638 2832852 - 2832526 - | putative copper binding protein BRADO2639 2833807 - 2832863 - | hypothetical protein TERM 1820 2833854 - 2833864 + H 86 -8.2 -4.63486 | CAGGGAGGAGAGCGG CGGC GGG GCCG TTTTATTCCCGGCCT BRADO2640 2834024 - 2835196 + | hypothetical protein BRADO2641 2837266 - 2835647 - | GMC-type oxidoreductase TERM 1821 2836668 - 2836656 - G 75 -6.9 -4.36914 | GCCGGCTTGAGAAAA CCCCG TGC CGAGG ACCAGCGCCGGCCGC TERM 1822 2837367 - 2837325 - H 84 -15.7 -3.28791 | gap 1, opp_overlap 2837290 2837319 2837363, overlap 2837363 2837364 AGCGGGGCCGGACAA GCGCCTCGTTCATGGCT-GG TTGA CCGAGCCATGAAACAGGCGC AGCCCTCATCTTGGG BRADO2642 2837442 - 2838611 + | putative amidohydrolase family protein; putative hippurate hydrolase (benzoylglycine amidohydrolase) TERM 1823 2838641 - 2838699 + T 70 -10.2 -3.66178 | gap 3, opp_overlap 2838640, overlap 2838620 2838641 2838645 CTGTCTTCAAGCGAT -GGCCGGGCTCTGTCCCGCCTGCG-GGGC CGAA GCCCTTTCGGGCGGCGAAG-GCCCGGCCA TTTGCGGTTCGGGCA TERM 1824 2838641 - 2838698 + T 81 -16.2 -2.79492 | opp_overlap 2838640, overlap 2838620 2838641 2838645 CTGTCTTCAAGCGAT GGCCGGGCTCTGTCCCGCCTGCG-GGGC CGAA GCCCTTTCGGGCGGCGAAG-GCCCGGCC ATTTGCGGTTCGGGC TERM 1825 2838645 - 2838675 + T 71 -11.1 -3.53012 | gap 1, opp_overlap 2838640, overlap 2838620 2838641 2838641 CTTCAAGCGATGGCC GGGC-TCTGTCCCG CCTG CGGGGCCGAAGCCC TTTCGGGCGGCGAAG BRADO2643 2840199 - 2838718 - | putative Uracil-DNA glycosylase TERM 1826 2840271 - 2840238 - R 73 -13.2 -3.18582 | opp_overlap 2840222 2840242, overlap 2840242 GAGCGCAGCGACGAA GCAATCCAGAGTCG TCGTGT CGCCCCTGGATTGC TTCGGGGCTTCGCCC BRADO2644 2841543 - 2840305 - | putative elongator protein 3/MiaB/NifB TERM 1827 2840866 - 2840918 + g 85 -16.7 -3.40611 | overlap 2840868 2840884 GGCACCGACGATCAT CTGCGTGCTCTGGCCGGCCGGCGCG AAG CGCGGCGGCCGGGCGCGGCGCACCG TCTTCTTCGCCTCCG TERM 1828 2840868 - 2840920 + g 73 -11.3 -3.65046 | gap 4, overlap 2840866 2840884 CACCGACGATCATCT G-CG-TGCTCTG-GCC-GGCCGGCGCG AAG CGCGGCGGCCGGGCGCGGCGCACCGTC TTCTTCGCCTCCGCC TERM 1829 2841893 - 2841924 + GH 71 -13.6 -2.58714 | gap 1, overlap 2841893 CTGCACGAGGTGTTC GCCGAGGCCGGCCGC CAG GCGGC-GGCCGCGAC TGGCTTCGTGTGCGG TERM 1830 2841893 - 2841928 + GH 74 -13.3 -3.2614 | overlap 2841893 CTGCACGAGGTGTTC GCCGAGGC-CGGCCGCC AGGC GGCGGCCGCGACT-GGC TTCGTGTGCGGGCTC BRADO2645 2841728 - 2842522 + | hypothetical protein BRADO2646 2842416 - 2844008 + | putative DNA-directed DNA polymerase TERM 1831 2844185 - 2844152 - f 71 -13.1 -3.05596 | CATCTTTCGATGCAA TCCGACCTCTCCCCG CAAG CGGGGCGAGGTAAGA GCGGCGCCAGCCGCG TERM 1832 2846717 - 2846693 - g 88 -9.9 -4.38154 | ACACGCTGGAGAAAA CGGATGGCGAA TAT TGCGCCGTCCG CCTCGGCTTCCGCCA dnaE2 2844259 - 2847771 + | error-prone DNA polymerase TERM 1833 2847892 - 2847868 - f 77 -12.8 -3.53811 | CGTAGGGTGGGCAAA GGCACGGCGC GCCAA GCGCCGTGAC GTGCCCACCGGCCGC BRADO2648 2847963 - 2848454 + | hypothetical protein TERM 1834 2848514 - 2848456 - T 72 -11.7 -3.33696 | gap 2, opp_overlap 2848468, overlap 2848457 CGTTCGGCGAATGAA GGCGGTGGGCACGTCGTCTCGGACGATGC TTC GCATCGCCCGAGACGCCTTTGCC-C-ACC CTACGGTTCATCATG TERM 1835 2848515 - 2848457 - T 100 -25.5 -2.60075 | opp_overlap 2848468, overlap 2848456 GTTCGGCGAATGAAG GCGGTGGGC-ACGTCGTCTCGGACGATGC TTC GCATCGCCCGAGACGCCTTTGCCCACC-C TACGGTTCATCATGA TERM 1836 2848468 - 2848504 + T 100 -20.9 -3.53811 | opp_overlap 2848456 2848457 GAAGGCGGTGGGCAC GTCGTCTCGGACGATGC TTC GCATCGCCCGAGACGCC TTTGCCCACCCTACG TERM 1837 2848577 - 2848551 - T 81 -13.6 -3.53811 | opp_overlap 2848571 CGTAGGGTGGGCAAA GGCACGGCGCGC ATC GCGCGTCGTGAC GTGCCCACCGGCCGC BRADO2649 2849007 - 2848747 - | hypothetical protein TERM 1838 2849116 - 2849094 - H 85 -9.9 -4.29396 | gap 1, opp_overlap 2849108 AAGCAGTCAGCAAAA CTCG-GACGC GTCG GCGTCGCGAG GCGGCTCGCTGACGT TERM 1839 2850560 - 2850586 + G 79 -11.4 -3.83026 | TTCGCCGGGCGAGCA GCCCGCCGTCGC CGT GCCGCGGCAGGC TTTGATCTACGAAGG BRADO2650 2849526 - 2850773 + | putative signal peptide BRADO2651 2850815 - 2853937 + | putative cation/heavy metal efflux system protein BRADO2652 2854626 - 2853934 - | ABC transporter ATP-binding protein BRADO2653 2856383 - 2854632 - | branched chain amino acid ABC tranpsorter ATP-binding protein BRADO2654 2857287 - 2856439 - | hypothetical protein TERM 1840 2857322 - 2857297 - R 93 -17.5 -3.50393 | TTCCACTTGAGAGAA GCGGGGCGGGC TGTA GTCCGCCCCGC GGGATCATACGCGAT BRADO2655 2858511 - 2857351 - | putative signal peptide TERM 1841 2857452 - 2857468 + g 70 -11.5 -3.43217 | opp_overlap 2857446 CGAGATACATGGTCA GCGGCGC GTG GCGCTGC TTGTCCATCTTGATG BRADO2656 2859384 - 2858554 - | putative N-carbamoyl-D-amino acid hydrolase TERM 1842 2859513 - 2859479 - R 100 -16.5 -5.27335 | gap 1, opp_overlap 2859511, overlap 2859510 CGCGCCAAACAAAAA GCCCCCG-ACTGCGCC TTGC GGCGCAATACGAGGGC TGCATAGCCTGATGT BRADO2658 2860293 - 2859670 - | hypothetical protein BRADO2659 2861483 - 2860308 - | putative amidase expression-regulating protein TERM 1843 2860455 - 2860413 - G 85 -15.5 -3.63068 | gap 1, opp_overlap 2860410 2860409 2860408 2860451 CCAGACGATGTCAAA CTGGCCGTCGGCGCGGA-CG CGGC CGATCCGCGGCGTCGTCCAG ACATGGTTGTTGTCG TERM 1844 2862869 - 2862841 - g 72 -8.2 -4.07568 | GCGCTGCTTGCAAAA TTCATCATCGTG ATCCG CGCGACGATGAA GGGCAATCTGGCGGT BRADO2660 2862238 - 2863317 + | hypothetical protein BRADO2661 2864654 - 2863695 - | hypothetical protein BRADO2662 2866414 - 2864987 - | putative outer TolC membrane protein TERM 1845 2865604 - 2865623 + g 77 -10 -3.96841 | gap 1, overlap 2865599 CGTCGACGTCGAAGC TCGCGGCGG CAA CCGCCG-GA TTCTCTTTGTTGGCG BRADO2663 2867640 - 2866840 - | putative enoyl-CoA hydratase TERM 1846 2867662 - 2867642 - R 100 -16.9 -4.19735 | CCCTGCAAAATCAAA CAGCGGGCA ATC TGCCCGCTG GATGGCTGCGCATCA BRADO2664 2868075 - 2867701 - | hypothetical protein BRADO2666 2868442 - 2868954 + | RNA polymerase sigma factor BRADO2667 2868951 - 2869595 + | hypothetical protein BRADO2668 2870721 - 2869612 - | hypothetical protein BRADO2669 2871880 - 2870732 - | hypothetical protein BRADO2670 2872212 - 2872781 + | RNA polymerase sigma factor TERM 1847 2873330 - 2873302 - g 75 -11.7 -3.65812 | gap 1 GGTCGCCGAATACAA GGCCGCGCCGCC CGCTCC GGCGGCG-GACC CGAAAGCCGCCGGCC BRADO2671 2872778 - 2873731 + | hypothetical protein BRADO2672 2873892 - 2873725 - | hypothetical protein TERM 1848 2874039 - 2874068 + H 100 -16.5 -4.05788 | overlap 2874028 GCGCCCATATGGCTC GAGCCGTCCGG TTGTCCCC CCGGACGGCTC TTTCATTTCGGGCGA BRADO2673 2874360 - 2875085 + | hypothetical protein BRADO2674 2876594 - 2875221 - | putative pectin lyase fold TERM 1849 2876366 - 2876401 + g 73 -14.1 -3.10164 | gap 3, opp_overlap 2876366 TGGAGCTCCGGTAAA CGCCGGGCGGCA-GCGCC AGC GGCGCCTG-CGCCCG-CG TTGCCTCATCGATCG TERM 1850 2876401 - 2876366 - G 81 -14.6 -3.53811 | gap 1, opp_overlap 2876366 TGGAGCTCCGGTAAA CGCCGGGCGGCAGCGCC AGC GGCGCCTGCGCCC-GCG TTGCCTCATCGATCG BRADO2675 2876846 - 2877133 + | putative transglycosylase-associated protein TERM 1851 2877191 - 2877223 + T 100 -21.3 -3.33492 | overlap 2877167 AGCTCGATCGATCTC GGCTGGTGCGACTGG TTT CCTGTCGCGCCAGCC TTATCAGCTCGATCA BRADO2676 2877845 - 2877174 - | putative pyrrolidone-carboxylate peptidase (5-oxoprolyl-peptidase) (pyroglutamyl-peptidase I) (PGP-I) (Pyrase) TERM 1852 2877340 - 2877391 + g 73 -13.7 -3.13164 | gap 3, opp_overlap 2877339 GGGATGTGGATGAAG GC-GGCGAGCCG-CGGGCCGTTCGCG TCC CGCGT-CGCCTCGATGGCTCGCCAGC TTAGATAGTTGCAGA BRADO2677 2878831 - 2877842 - | arginine/ornithine transport system ATPase BRADO2678 2879784 - 2879020 - | hypothetical protein mutB 2882058 - 2879902 - | methylmalonyl-CoA mutase TERM 1853 2881261 - 2881237 - G 81 -12.1 -3.7941 | GATCGCCCAGAAGAA CGACAGCCTCG GCG CGAAGCGGTCG ACGTCGAGACCCGCC BRADO2680 2882264 - 2882055 - | hypothetical protein BRADO2681 2882721 - 2882257 - | putative glutathione-dependent formaldehyde-activating (GFA) mutA 2884583 - 2882724 - | methylmalonyl-CoA mutase small subunit (MCM-beta) TERM 1854 2883439 - 2883494 + g 71 -14.7 -2.57468 | overlap 2883438 2883451 GTGGTGCTCAACTCG CTCGTCAGCG-CCTCGATGCCGCCGGC GCCG GCCG-CGGGATCGGCGACGCGGGCGAG ATTGCTCTCCTCAAG folK 2885177 - 2884686 - | 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (7, 8-dihydro-6-hydroxymethylpterin-pyrophosphokinase) (HPPK) (6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase) (PPPK) folB 2885550 - 2885182 - | dihydroneopterin aldolase (DHNA) folP 2886404 - 2885547 - | dihydropteroate synthase BRADO2686 2886891 - 2886484 - | hypothetical protein BRADO2688 2887506 - 2889110 + | putative ATPase BRADO2689 2889220 - 2890623 + | hypothetical protein BRADO2690 2890735 - 2891703 + | AraC family transcriptional regulator TERM 1855 2891836 - 2891862 + G 73 -3.7 -4.57569 | gap 2, overlap 2891837 GCGACGATGGCATTT G-TGACGAC-CCG AGA CGGCGTCGACATC TTTTTCAAGGACTGG BRADO2692 2891827 - 2892663 + | non-heme chloroperoxidase (chloride peroxidase) (CPO-P) (chloroperoxidase P) BRADO2693 2892691 - 2893437 + | putative nucleoside-diphosphate-sugar epimerase BRADO2694 2894668 - 2893445 - | hypothetical protein TERM 1856 2894019 - 2894061 + g 75 -13.4 -3.38812 | overlap 2894017 GGATCGCGCCGGGCC TGCTCGTCGCTCTCGCGCTT GGC ATGCATGACGGCGACGAGCA TCTTGTTGAGGCGGA degP 2895906 - 2894809 - | Serine protease do-like precursor groES 2896128 - 2896442 + | co-chaperonin GroES TERM 1857 2898081 - 2898069 - g 70 -10.5 -3.6968 | CGATAAGCCGAAGAA GGCGG AGA CCGCC GCCGCGCCGGCGATG groEL 2896486 - 2898105 + | chaperonin GroEL BRADO2698 2898379 - 2898609 + | hypothetical protein ibpA 2898829 - 2899278 + | small heat shock protein, HSP20-like chaperone TERM 1858 2899290 - 2899321 + F 93 -18.6 -3.27259 | opp_overlap 2899256, overlap 2899291 CTGACATGTTCGACG AGCGACGCGGGCCG GCCG CGGCCCGCGCCGCC TTCATCATCTGTCTC TERM 1859 2899291 - 2899320 + F 100 -22.1 -2.55874 | opp_overlap 2899256, overlap 2899290 TGACATGTTCGACGA GCGACGCGGGCCG GCCG CGGCCCGCGCCGC CTTCATCATCTGTCT TERM 1860 2899642 - 2899621 - g 72 -15.1 -2.74523 | overlap 2899618 GGACCGCGAAGACCA GCCGCCACG CCCG CGCGGCGGC GCTGCGATGCGCATC TERM 1861 2899725 - 2899746 + G 100 -11.5 -4.56597 | overlap 2899726 CGAGCGGAAGCCGGA TGCGGCCGG CGCC CCGGCTGCG TTTTTCGCGCGAAGC TERM 1862 2899726 - 2899745 + G 71 -12.8 -3.33744 | overlap 2899725 GAGCGGAAGCCGGAT GCGGCCGG CGCC CCGGCTGC GTTTTTCGCGCGAAG BRADO2700 2899367 - 2899906 + | hypothetical protein TERM 1863 2899943 - 2899922 - T 100 -14.4 -5.30155 | opp_overlap 2899922 GGAGCAAGTAAAAAA CGCCGCCC GGAATT GGGCGGCG TTTCATTCCAAATAG TERM 1864 2899922 - 2899943 + T 91 -15.1 -3.91084 | opp_overlap 2899922 GGAGCAAGTAAAAAA CGCCGCCCG GAAT TGGGCGGCG TTTCATTCCAAATAG BRADO2701 2900782 - 2900003 - | hypothetical protein TERM 1865 2900821 - 2900862 + r 100 -22.4 -2.66733 | gap 1 TGACCCGAGCGTAAG CTGCCTCTCCCGGCTCGGC AAGGC GCGGAGCCGGGAG-GGCAG TCATGTCGATTGGCG BRADO2702 2902541 - 2900889 - | hypothetical protein TERM 1866 2901438 - 2901402 - G 70 -11.6 -3.44206 | overlap 2901393 CAACAGCCACGAGAA CGCGATGCCGCCGA GCAGCGCCA TCGGCGGGATCACG AATACGAAATGGCGG TERM 1867 2901851 - 2901872 + g 72 -13.7 -3.0792 | gap 1, opp_overlap 2901839 2901836 2901850 2901851, overlap 2901841 2901855 GCACGCTGGCGAAAC GGCGCACCGC CTC GCGG-GCGCC TTGCGTGCGGTATTC TERM 1868 2903554 - 2903509 - g 81 -10.9 -4.08216 | opp_overlap 2903509 GGAGCGGGCCGAAAA GCGCGGCGCCGAGTCGATGCC GACG GATTTCCGCTCGCCGCCGCGC AGCGAACCCCCGGCG BRADO2704 2902985 - 2903905 + | putative signal peptide BRADO2705 2904101 - 2904517 + | Ros/MucR family transcriptional regulator BRADO2706 2904949 - 2904524 - | putative sufE-like protein BRADO2707 2905486 - 2905025 - | hypothetical protein TERM 1869 2905971 - 2905999 + G 85 -10.1 -4.1964 | CATCGCGCTTTCATC GCGCCGCGCCTGC TCG GCAGCCTCGCCGC TTTTGCCGTGTTCCC TERM 1870 2906056 - 2906085 + G 79 -4.9 -4.81814 | gap 1, overlap 2906058 CGAGTGCGCTCGAGG TCGGCGCGCT-GGC CTG GCTGATCGCGCCAA TTTTGTTGTCCTGGT BRADO2708 2905872 - 2907704 + | sensor histidine kinase TERM 1871 2908056 - 2908028 - g 70 -10.2 -3.66874 | gap 1 CGAAGGTGATCGAAA CCCGGCCGC-CGG AGAC CCGCGCGGCGGAG CCGAAGGTGGCGGAG BRADO2709 2907778 - 2908392 + | hypothetical protein BRADO2710 2908445 - 2908795 + | hypothetical protein TERM 1872 2908795 - 2908830 + T 74 -9.8 -3.81885 | overlap 2908776 GCCCGAGCAGCCCTA GGTCACGATGCGTTTC TACG GAAACTCATCATGATC TTATCTCTTTGTCTC BRADO2711 2909846 - 2908893 - | hypothetical protein BRADO2712 2910233 - 2910421 + | hypothetical protein BRADO2713 2910450 - 2911199 + | putative signal peptide BRADO2714 2912909 - 2911419 - | putative acetyl-CoA hydrolase/transferase family protein; putative succinyl-CoA:coenzyme A transferase BRADO2715 2913678 - 2913175 - | hypothetical protein BRADO2716 2914390 - 2913806 - | putative signal peptide BRADO2717 2914968 - 2914387 - | putative signal peptide BRADO2718 2917263 - 2914984 - | putative penicillin-binding protein (mrcA-like) BRADO2719 2917624 - 2918097 + | hypothetical protein BRADO2720 2918269 - 2919852 + | major facilitator superfamily permease BRADO2721 2921772 - 2920063 - | TolA family protein BRADO2722 2923908 - 2921785 - | putative Outer membrane protein and related peptidoglycan-associated (lipo)proteins BRADO2723 2925771 - 2924179 - | putative metallo-beta-lactamase family protein TERM 1873 2924513 - 2924485 - G 75 -9.4 -4.05033 | GCCATGCGACAGAAA CAGCCCGCGCGC GATCG GCCGGCGGGCCG CGATCCAGCGCGCGA BRADO2724 2927265 - 2925814 - | thymidine phosphorylase BRADO2725 2927726 - 2927890 + | putative Flp/Fap pilin component BRADO2726 2929206 - 2928217 - | putative Ku family protein TERM 1874 2928250 - 2928265 + g 83 -8.2 -4.63527 | overlap 2928246 GCGTGCCGCGGTCCG GGCCGG CTTC TCGGCC TTTTTCGGCTCGTCC TERM 1875 2928503 - 2928526 + g 86 -4.6 -5.1356 | gap 1, overlap 2928506 TTCGGCGCCGCCCTG GCGGTGATGGT CAC GCCATTA-CGC TTTTTGTTGATCAGC TERM 1876 2928575 - 2928597 + g 73 -6.2 -4.30987 | overlap 2928571 TAGTGATCCTCGAAA TTCTCCGGCT GGA AGTCGGCGGA TTTCTTCTCGACGAT BRADO2727 2929483 - 2929635 + | hypothetical protein TERM 1877 2929715 - 2929734 + F 100 -16.4 -4.30576 | CCCATGACCGATCCA GCCCGGCC CCAC GGCCGGGC TTTTCATGATGACCA TERM 1878 2929838 - 2929817 - f 80 -5.8 -4.79223 | opp_overlap 2929821 2929822, overlap 2929822 CGAGATGACCAAAAA GTAACCCG GTCGGT CGGGTTCC GTTCATGCACGGTTC BRADO2728 2929912 - 2930586 + | putative two-component transcriptional regulator TERM 1879 2930589 - 2930629 + F 84 -14 -3.74224 | CGCCAGCGCCTGATC CGTCCCGGCGCCC-GCCATT CAC GGTGGCCGGGCGCC-GGCCG TTTCGCTAATTTGCG BRADO2729 2930648 - 2932024 + | putative two-component sensor histidine kinase TERM 1880 2932390 - 2932436 + G 70 -11.3 -3.54424 | overlap 2932413 2932421 AGGTCGCACGATCGC CGGCCCGCGAGGAGCGTCGCC AGGGC GGCGACGGACCGCGCCGCCTG TTTCGGCCGCTCGAG TERM 1881 2932413 - 2932434 + G 75 -13.7 -3.35046 | gap 1, overlap 2932390 2932421 GAGGAGCGTCGCCAG GGCGGCGACG GAC CG-CGCCGCC TGTTTCGGCCGCTCG TERM 1882 2933019 - 2932984 - g 74 -14.6 -2.98493 | overlap 2932958 2932982 2932981 CCGACGACGAAATCA GGGTCGCGGCGACCCC GTTC GGCGTCGCCGTGACCA TCGCGCTCAACGACC BRADO2730 2932134 - 2933621 + | hypothetical protein BRADO2731 2933679 - 2933996 + | hypothetical protein TERM 1883 2934753 - 2934772 + G 71 -12.8 -3.28712 | opp_overlap 2934698 TCTCGGCGAGGTGAT CGCCGCCG CCGC CGGTGGCG TTGTCACCGCCGAGG cycH 2934166 - 2935266 + | cytochrome c-type biogenesis protein cycH cycJ 2935301 - 2935816 + | cytochrome c-type biogenesis protein CcmE TERM 1884 2937063 - 2937097 + G 71 -15.1 -2.65264 | GAAGCGCGGTGATCT CGTC-GCGGCGACGCAG CGG CTGC-TCGCCGCCGGCG TGGTCTCGCTGGTCG cycK 2935813 - 2937792 + | cytochrome c-type biogenesis protein cycK TERM 1885 2937938 - 2937902 - g 85 -18 -2.72991 | gap 1, opp_overlap 2937901 GGACACCGCCAAGGA GCAGCGC-GCCCGAGCG CTGT CGCGCGAGCTGCGCTGC ATGGTCTGCCAGAAC cycL 2937798 - 2938283 + | cytochrome c-type biogenesis protein cycL precursor TERM 1886 2939523 - 2939547 + G 79 -6.9 -4.68593 | overlap 2939520 2939525 CCACCATCGAGGCCG CGCGGGCCGGC GAG GCCGGCAAGGG TTTTTCGGTCGTGGC BRADO2736 2938610 - 2939953 + | putative methyl-accepting chemotaxis protein BRADO2737 2940427 - 2942436 + | putative methyl-accepting chemotaxis protein TERM 1887 2942500 - 2942453 - T 81 -16.4 -2.70932 | gap 1 GCGTCGCTCCAACGA CGGACGAGGAGGGCGGATTA-GC GCA GCGTAATCCGCCATCCCCACCCA ACAACAGCGGCGGCT TERM 1888 2942539 - 2942505 - T 75 -12.3 -3.67775 | gap 2, overlap 2942507 2942508 ATCCCCACCCAACAA CAGCGGCGGCTTACGCC TTC GGC-TAAGCCGCC-CTA CGCACTGCCGATCGG TERM 1889 2942537 - 2942507 - T 76 -12.7 -3.41988 | gap 2, overlap 2942505 2942508 CCCCACCCAACAACA GCGGCGGCTTACGCC TTC GGC-TAAGCCGCC-C TACGCACTGCCGATC BRADO2738 2943997 - 2942672 - | hypothetical protein TERM 1890 2943121 - 2943131 + g 81 -4 -5.00616 | TCATTATGCTCGTTG TATC CGT GATA TTTTTTAGGGGAGAA TERM 1891 2944570 - 2944590 + r 82 -11.1 -4.07568 | opp_overlap 2944560 GAACAGCCTCGGACT GCGTCCTTG GCG CCAGGACGC TTTTGGCAAGGCGAA BRADO2740 2945470 - 2945285 - | phage major coat protein hexon TERM 1892 2945537 - 2945580 + H 90 -19.6 -2.53213 | gap 1, opp_overlap 2945525, overlap 2945540 AAAGCGGGGGATCCA GTACGCCGCGGCCGTCGTGGT TGA GCCGAG-TGGCCGCGGCGTAC TGGATTCCCGCCTTC TERM 1893 2945943 - 2945953 + H 74 -5.4 -4.56775 | TTTGGCAAGCCCCTG TCCT CAA AGGA TTTTTCGCAACAACT BRADO2741 2946138 - 2947724 + | putative serine protease do-like precursor TERM 1894 2947869 - 2947912 + F 70 -11.7 -3.13403 | opp_overlap 2947835 2947873 2947874, overlap 2947867 2947874 2947875 CCCCCTCCGTCGGAA GGAACTCGGGCGGTGAAGT CCCCCA GCTTCACCGCCCACTTTCC TGTTGATCACCCCCG TERM 1895 2947874 - 2947907 + F 71 -8.8 -3.95022 | opp_overlap 2947873 2947874, overlap 2947869 2947867 2947875 TCCGTCGGAAGGAAC TCGGGCGGTGAAGT CCCCCA GCTTCACCGCCCAC TTTCCTGTTGATCAC BRADO2742 2947985 - 2948689 + | putative two-component transcriptional regulator; putative transcriptional regulator involved in heavy-metal (Cu/Zn) homeostasis TERM 1896 2949369 - 2949341 - g 75 -9.6 -4.07568 | TCGGCTCGCGGAAAA CCTCAATGCGAT GCTGG AGCGCATCGAGG CACTGATGACCGGGC BRADO2743 2948673 - 2950133 + | putative two-component sensor histidine kinase; putative heavy-metal sensor (Cu/Zn) glnE 2950130 - 2953090 + | glutamate-ammonia-ligase adenylyltransferase ([glutamate--ammonia-ligase] adenylyltransferase) (glutamine-synthetase adenylyltransferase) (ATase) BRADO2746 2953856 - 2953428 - | hypothetical protein TERM 1897 2954250 - 2954223 - g 70 -11.2 -3.61178 | TGGAGGGAGCGGAAA TCGCGCGGGTCG ATTA CGACGTGCGCGA GCGGTCGGAATATAT BRADO2747 2953985 - 2955184 + | putative adenylate/guanylate cyclase BRADO2748 2955852 - 2955316 - | hypothetical protein BRADO2749 2956480 - 2956022 - | hypothetical protein TERM 1898 2956192 - 2956207 + g 72 -11.8 -3.53031 | overlap 2956188 TGATGCCGGCCACCA GCGCCG GTGT CGGCGC TTGCTTTCCGATCAA BRADO2750 2956778 - 2956491 - | hypothetical protein BRADO2751 2958558 - 2956894 - | hypothetical protein TERM 1899 2957923 - 2957887 - G 72 -13.1 -3.14931 | gap 1, opp_overlap 2957884 GTCATCGCGGACGAA GCCGAAGGCCCGGC GCAGATCGAG GCCGGGC-TTCGGC AGATGTGTGACCAGC BRADO2752 2958736 - 2959644 + | glutamate/aspartate periplasmic-binding protein BRADO2753 2959998 - 2959708 - | hypothetical protein TERM 1900 2960106 - 2960125 + r 83 -16.4 -2.88579 | TTCGCTGAGGTGAGA CCCGGCCG TTGG CGGCCGGG TCTATGAACCATTAA ilvD 2961996 - 2960158 - | dihydroxyacid dehydratase (DAD) TERM 1901 2962533 - 2962520 - g 71 -9.5 -3.84451 | CGGCTGAAACTGAAA GCGCC CGAT GGCGC CGAGCTGGCGCTGAC BRADO2755 2962331 - 2962687 + | copper resistance protein CopC BRADO2756 2962704 - 2964362 + | copper resistance protein D family BRADO2757 2965152 - 2964370 - | hypothetical protein BRADO2758 2965752 - 2965246 - | putative signal peptide TERM 1902 2965811 - 2965787 - R 100 -16.4 -4.74012 | opp_overlap 2965784 AGCAGAAAACGAAAA CGGGCCGCGC TTGTG GCGCAGCCCG TAGTAAATTGGCAAA icd 2967065 - 2965851 - | isocitrate dehydrogenase TERM 1903 2967128 - 2967109 - H 71 -9.3 -3.78329 | overlap 2967126 CGCCAGGAATGGAAA GCGCTTG TGAAAT CAAGCGC GTCATAGCACTGCTG BRADO2760 2967372 - 2968571 + | putative tRNA/rRNA methyltransferase BRADO2761 2968987 - 2968637 - | hypothetical protein BRADO2762 2969202 - 2969897 + | hypothetical protein TERM 1904 2969914 - 2969941 + F 81 -16.2 -2.70932 | opp_overlap 2969909 2969911 CTTCATCGAACAGCC CCGGTGCGCGGG TGGT CACGCGCGCCGG TCATTGCGAACCGGG TERM 1905 2971694 - 2971676 - g 79 -6.7 -4.62069 | gap 1, overlap 2971677 CGGCGATGCGAAAAA GGTGG-CG GCGG CGACCACC ACGACGTCGTCGGGC BRADO2763 2970162 - 2971865 + | putative peptidase C2, calpain TERM 1906 2972519 - 2972534 + G 72 -11.8 -3.59979 | GGTCGACGATCTCCT GCGCGC CACC GCGCGC TTTCCCGTCAAGGCC TERM 1907 2973355 - 2973336 - g 70 -8.6 -3.96148 | gap 1 CGGCTCGACGAGAAA TTC-CGGCG CGG CGCCGAGAA CCAAGCCTTCCTGGT BRADO2764 2972388 - 2974502 + | toxin secretion ABC transporter (ATP-binding and membrane protein); hlyB-like protein BRADO2765 2974513 - 2975931 + | HlyD family secretion protein TERM 1908 2975997 - 2975978 - f 72 -2.7 -4.7373 | overlap 2975954 2975990 GCATTTGAGCAAAAA CGCACCG TCAAAT CCGCGCG CGCACGCTTACGGAA BRADO2766 2976078 - 2977199 + | hypothetical protein BRADO2767 2978398 - 2977709 - | TetR family transcriptional regulator BRADO2768 2978647 - 2979189 + | putative osmC/ohr family protein BRADO2769 2979224 - 2980345 + | putative acyl-CoA dehydrogenase family protein BRADO2770 2980395 - 2981270 + | putative thiosulfate sulfurtransferase (rhodanese-like protein) TERM 1909 2981283 - 2981322 + F 85 -15 -3.53811 | opp_overlap 2981262 2981284, overlap 2981284 TAGAAGCTGCATGAG ATGCACATCCGGCCGC TGAAAAAC GCGGCCGGATGAGCAG TTTGAAGGCGCTGAG TERM 1910 2981284 - 2981321 + F 86 -18.5 -2.72144 | opp_overlap 2981262 2981284, overlap 2981283 AGAAGCTGCATGAGA TGCACATCCGGCCGC TGAAAAAC GCGGCCGGATGAGCA GTTTGAAGGCGCTGA TERM 1911 2981321 - 2981284 - f 86 -18.5 -2.8001 | opp_overlap 2981284 2981283, overlap 2981262 AGAAGCTGCATGAGA TGCACATCCGGCCGC TGAAAAAC GCGGCCGGATGAGCA GTTTGAAGGCGCTGA TERM 1912 2981544 - 2981584 + G 75 -6.8 -4.37092 | gap 1, overlap 2981540 GTCGTCGCCTCCGCC GTGTTGCGCGCGG-TGTTT CCGG AAGCAGCCACGCGCCGCGC TTTTCTGAAGACGGT BRADO2771 2981379 - 2982761 + | putative nitrate ABC transporter (substrate-binding protein) (ntrA-like protein) TERM 1913 2982841 - 2982810 - f 79 -8.7 -4.2558 | overlap 2982831 CATCGGTGATGAAAA GGACGCCACCG ACCACACCAA CGGTGTCGTCC CCGCGAACGCGGGGA BRADO2772 2982976 - 2983815 + | putative nitrate ABC transporter (permease protein) (ntrB-like protein) BRADO2773 2983824 - 2984726 + | putative nitrate ABC transporter ATP-binding protein (ntrC/D-like protein) TERM 1914 2984752 - 2984740 - f 71 -5.5 -4.31433 | GACGCTCAGAAGAAA CCCTC AAC GAAGG CCCATCAAGGGAGAC cynS 2984773 - 2985261 + | cyanate hydratase BRADO2775 2985657 - 2985340 - | hypothetical protein purC 2985969 - 2986736 + | phosphoribosylaminoimidazole-succinocarboxamide synthase purS 2986750 - 2986992 + | phosphoribosylformylglycinamidine synthase subunit PurS BRADO2778 2987013 - 2987267 + | hypothetical protein purQ 2987264 - 2987965 + | phosphoribosylformylglycinamidine synthase I (FGAM synthase I) BRADO2780 2988264 - 2988698 + | hypothetical protein TERM 1915 2988799 - 2988819 + F 100 -16.1 -4.03167 | CAGTTTTTTCTCGCG CCGTCCGGC AAC GCCGGGCGG TTGTTTGCGTTGTCC BRADO2782 2988956 - 2990215 + | hypothetical protein TERM 1916 2990247 - 2990273 + F 100 -22.4 -4.27117 | opp_overlap 2990234 TACGTGGCGAACGGG GAGCGGAAGCGC AAC GCGCTTCCGCTC TTTGTCTTGTCCCGC BRADO2783 2990477 - 2991214 + | hypothetical protein BRADO2784 2991794 - 2991312 - | hypothetical protein TERM 1917 2992237 - 2992253 + G 72 -13.7 -3.04144 | opp_overlap 2992217 CGTGATCGATATCGG CGACGGC CAG GCCGTCG TGTTCAAGATGGAGA TERM 1918 2993620 - 2993647 + G 78 -14.8 -3.35088 | opp_overlap 2993605, overlap 2993608 TGGGCGGGCGATCCT GCCGACGCCCTC GATC GGCGGCGTCGGC TTGCTTGACGACTTT purL 2991992 - 2994202 + | phosphoribosylformylglycinamidine synthase II TERM 1919 2994254 - 2994226 - T 100 -21.7 -3.28712 | TGTCGTCCCGGACAA GCCACGACGGCGC ACC GCGCCGACGTGGC GCCGGGGACCCATAC TERM 1920 2994470 - 2994426 - T 100 -22.4 -3.06183 | gap 1, opp_overlap 2994435, overlap 2994431 2994435 GTCATTGCGAGCGAA GC-GAAGCAATCCAGGGGTCC AGCG GGACTCCTGGATTGCTTCCGC GGAGCTTCGGGCTAT TERM 1921 2994464 - 2994431 - T 95 -19.7 -3.19192 | opp_overlap 2994435, overlap 2994426 2994435 TGCGAGCGAAGCGAA GCAATCCAGGGGTCC AGCG GGACTCCTGGATTGC TTCCGCGGAGCTTCG TERM 1922 2994460 - 2994435 - T 76 -13.3 -3.40788 | opp_overlap 2994435, overlap 2994431 2994426 AGCGAAGCGAAGCAA TCCAGGGGTCC AGCG GGACTCCTGGA TTGCTTCCGCGGAGC TERM 1923 2994435 - 2994460 + T 84 -15.5 -3.33696 | opp_overlap 2994435 2994431 2994426 AGCGAAGCGAAGCAA TCCAGGGGTCC AGCG GGACTCCTGGA TTGCTTCCGCGGAGC BRADO2786 2995728 - 2994532 - | putative acyltransferase family protein TERM 1924 2995185 - 2995151 - G 78 -6.3 -4.61852 | gap 1, opp_overlap 2995151, overlap 2995138 2995152 2995153 AACACGAGAAAGAAA TCGC-GTGGCTGCGCG AAGC CGCGCAGCGACAGCCG GTTGATCGGCTCGAG BRADO2787 2996146 - 2996319 + | hypothetical protein TERM 1925 2996350 - 2996336 - T 70 -10 -3.55444 | overlap 2996339 GGGTGAGCCGCTAAA CGATCG CGG CGATCG CCACGCCCAGGTTCG BRADO2788 2996766 - 2996404 - | hypothetical protein BRADO2789 2996996 - 2997235 + | BolA-like protein BRADO2790 2997272 - 2998477 + | hypothetical protein BRADO2791 2999424 - 2998450 - | hypothetical protein BRADO2792 3000735 - 2999482 - | hypothetical protein TERM 1926 3000593 - 3000617 + g 70 -11.3 -3.59979 | ACCTGGTCCTCGGGG CTGAGCGGCGC CGC GCGGCGCTCCG TTTCGCCTCGGACCG TERM 1927 3000891 - 3000905 + H 76 -5.6 -4.56914 | overlap 3000892 TCCGCCGGGCCGGGA GGCCGA TCC TCGGCA TTTTACTTTGGCTGA TERM 1928 3001117 - 3001129 + G 75 -9.1 -4.07885 | GGGGACGCCGCAGTT TCCGC AGT GCGGA TTTTCCGGCCAGGTC BRADO2793 3001040 - 3001378 + | putative glutaredoxin family protein TERM 1929 3001471 - 3001440 - g 75 -14.4 -3.24747 | opp_overlap 3001440 3001437 3001450, overlap 3001441 CGCCGACATCACCAA GCTCGGCGTTGACG CGAT CGTCAACGCCGCGA ACTCGTCTCTGCTCG TERM 1930 3001470 - 3001441 - g 85 -17.9 -2.54634 | opp_overlap 3001440 3001437 3001450, overlap 3001440 GCCGACATCACCAAG CTCGGCGTTGACG CGAT CGTCAACGCCGCG AACTCGTCTCTGCTC BRADO2794 3001375 - 3001944 + | putative Appr-1-p processing enzyme family protein BRADO2795 3001975 - 3003192 + | putative beta-lactamase BRADO2796 3004344 - 3003277 - | putative L-allo-threonine aldolase TERM 1931 3004044 - 3004010 - G 74 -12.1 -3.57144 | gap 1, opp_overlap 3004009 3004013, overlap 3004011 TGCGTCACCTGGAAA CCGC-CGAGCGCGGCA TGCG CGCCGCCCTCGCGCGA GATGATGTGCGCGGT BRADO2797 3004872 - 3004420 - | hypothetical protein TERM 1932 3005110 - 3005081 - R 100 -17.9 -5.15117 | opp_overlap 3005080 3005079 GAAAACTCCAAAAAA CAAAGGCCCCGGC GTAT GCCAGGGCCTTCG GATTATCAGATGTGA rpsD 3005765 - 3005148 - | 30S ribosomal protein S4 TERM 1933 3005900 - 3005871 - R 74 -12.1 -3.43944 | gap 1, opp_overlap 3005883, overlap 3005888 3005893 AGCATGAAGGGACAA GGCCACGGGTCGCG AAA CGCAACGCG-GGCC GAAAGCGGCCCGCGA TERM 1934 3005918 - 3005888 - R 76 -12.5 -3.53444 | gap 1, opp_overlap 3005883 3005910, overlap 3005871 3005893 3005906 CCACGGGTCGCGAAA CGCAACGCGGGCCG AAAG CGGCCCGCGA-GCA GGGCGGTTCTTAAGG TERM 1935 3005914 - 3005893 - R 93 -18.7 -3.27525 | opp_overlap 3005883 3005910, overlap 3005871 3005888 3005906 GGTCGCGAAACGCAA CGCGGGCCG AAAG CGGCCCGCG AGCAGGGCGGTTCTT BRADO2799 3006806 - 3005982 - | putative acyltransferase BRADO2800 3007287 - 3006904 - | hypothetical protein TERM 1936 3007267 - 3007279 + g 75 -3.3 -4.77036 | CACGGCCAGCGACAG GCCGA AAA TCGTC TTTTTCATCATGAGC BRADO2801 3008126 - 3007353 - | putative HpcH/HpaI aldolase family protein; putative 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase (HHED aldolase) murI 3008937 - 3008140 - | glutamate racemase TERM 1937 3009186 - 3009206 + H 74 -13.9 -2.93073 | overlap 3009183 GGTTTGATGGGTCCT GCGCCGGCG CCG CGCCGCCGC TGCTTCTTCGGGACG TERM 1938 3009298 - 3009255 - H 84 -16.2 -3.06183 | opp_overlap 3009250 3009260 3009264, overlap 3009260 3009264 GTCATTGCGAGCGAA GCGAAGCAATCCAGAGTC CCGCCCAC GACTCCGGATTGCTTCGT CGCTCTGCTCCTCGC TERM 1939 3009293 - 3009260 - H 73 -13.3 -3.19192 | opp_overlap 3009250 3009260 3009264, overlap 3009255 3009264 TGCGAGCGAAGCGAA GCAATCCAGAGTC CCGCCCAC GACTCCGGATTGC TTCGTCGCTCTGCTC BRADO2803 3009923 - 3010222 + | putative transcriptional regulatory protein, Ars family BRADO2804 3010219 - 3010698 + | hypothetical protein BRADO2805 3010717 - 3011130 + | putative glutathione-dependent formaldehyde-activating enzyme (GFA) BRADO2806 3011271 - 3011675 + | hypothetical protein BRADO2807 3011696 - 3011968 + | hypothetical protein TERM 1940 3012256 - 3012284 + T 76 -10.2 -3.85817 | overlap 3012257 GCGGATCGGTCGTAC CAGCCCTCTCCC ACAAG GGGAGAGGGCGC TTTATCCGGCGGCGT TERM 1941 3012257 - 3012283 + T 74 -13.7 -2.91276 | overlap 3012256 CGGATCGGTCGTACC AGCCCTCTCCC ACAAG GGGAGAGGGCG CTTTATCCGGCGGCG BRADO2808 3012601 - 3012386 - | hypothetical protein BRADO2809 3013432 - 3012803 - | hypothetical protein TERM 1942 3013060 - 3013046 - G 75 -7 -4.30719 | CGGGGCGACAATAAA GCCGCG ATC CGGGGC AGCCATCGCGAACCG ddlA 3014559 - 3013456 - | D-alanine--D-alanine ligase A (D-alanylalanine synthetase A) (D-Ala-D-Ala ligase A) BRADO2811 3015251 - 3014724 - | hypothetical protein BRADO2812 3015568 - 3015401 - | hypothetical protein TERM 1943 3015534 - 3015551 + g 79 -8.4 -4.431 | ATCAGCGCGCATTCC GCTGCG TCGGCC CGCAGC TTTTCTGGCTGCGTC BRADO2813 3016144 - 3015731 - | hypothetical protein TERM 1944 3016659 - 3016693 + G 86 -17.8 -2.8547 | CGCTCTGTCCACTGC GAGTCGCGCCGGGCTC GAC GAGGCCGGTGCGACAC TGTCCTATGCGCCGT TERM 1945 3016736 - 3016759 + G 93 -10.2 -4.58395 | TTCTGTTCGCGACGC TGGTCGGCGG ACTG CCGGCGGCCA TTTTTGCCGCGTGGC BRADO2814 3016540 - 3017487 + | hypothetical protein BRADO2815 3017640 - 3017765 + | hypothetical protein BRADO2816 3017903 - 3018916 + | putative alcohol dehydrogenase BRADO2817 3019875 - 3019144 - | hypothetical protein BRADO2818 3020843 - 3019929 - | putative inner membrane transport protein TERM 1946 3021035 - 3021082 + r 71 -9.2 -3.72893 | overlap 3021036 GCCACGATCGCGAGT CCGTAGGGTGGGCAAAGGC-GC TGCCGT GCTGTCTC-GCCCACCCTACGC TTTCATCAACGGATC TERM 1947 3021036 - 3021081 + r 70 -12.7 -2.83522 | overlap 3021035 CCACGATCGCGAGTC CGTAGGGTGGGCAAAGGC-GC TGCCGT GCTGTCTC-GCCCACCCTACG CTTTCATCAACGGAT BRADO2819 3022268 - 3021096 - | putative amidohydrolase family protein; putative hippurate hydrolase (benzoylglycine amidohydrolase) BRADO2820 3022676 - 3022464 - | hypothetical protein BRADO2821 3024488 - 3022758 - | hypothetical protein BRADO2822 3025649 - 3024693 - | hypothetical protein TERM 1948 3025153 - 3025099 - G 72 -14.3 -3.07222 | gap 1, overlap 3025088 3025116 AGCAGCACGGCAAGA CCATCGCCGGCCATGAAGCCGATCGC CGCG GCGATCAGCGCCAATGCCGGC-ATGA CATTGCCCATCGGAA TERM 1949 3025255 - 3025309 + g 70 -12.9 -3.01712 | gap 2, opp_overlap 3025250, overlap 3025257 AGCCAGACCAGCCGG TCCTC-GCGCAGGCCGCG-CTCGGC ATAGCCG GCCCAGTCGAGGCCTGCGCGGATGA TCTTGCGGAGCAGCC BRADO2823 3026645 - 3025668 - | TerC family protein BRADO2824 3027197 - 3028150 + | putative lipid kinase TERM 1950 3029938 - 3029960 + G 73 -12.6 -3.40403 | opp_overlap 3029929 GGACAAGCGCGACGT GCTGGAGCGC GCG GCGCGCCGGC TTCTGGTCAAGGAGA ftsH 3028211 - 3030058 + | cell division protein ftsH homolog (ATP-dependent zinc-metallo protease) BRADO2826 3030408 - 3030319 - | cytochrome b(561) (fragment) BRADO2827 3030861 - 3030424 - | putative cytochrome b561 family protein BRADO2828 3031085 - 3031633 + | putative cytochrome b561 family protein BRADO2829 3031688 - 3032452 + | hypothetical protein purB 3033784 - 3032477 - | adenylosuccinate lyase TERM 1951 3033978 - 3033945 - H 93 -8.2 -5.1166 | opp_overlap 3033945 3033942, overlap 3033949 TACTAAAATTAAAAA TCTAGCTGACAGAT ATTGAA ATCTGTCAGCGCGA TGGTGTATATGCAAC BRADO2831 3034058 - 3034231 + | hypothetical protein BRADO2832 3034228 - 3034815 + | TetR family transcriptional regulator BRADO2833 3035062 - 3035841 + | hypothetical protein BRADO2834 3035838 - 3036509 + | hypothetical protein BRADO2835 3036506 - 3037114 + | putative signal peptide BRADO2836 3037318 - 3038256 + | putative phospholipase C/P1 nuclease family protein BRADO2837 3038524 - 3039264 + | putative phosphoesterase BRADO2838 3039268 - 3040725 + | putative serine/threonine protein kinase dctA 3041086 - 3042417 + | C4-dicarboxylate transporter DctA BRADO2840 3043363 - 3042533 - | hypothetical protein TERM 1952 3043447 - 3043427 - R 78 -6.8 -4.59773 | opp_overlap 3043430 GGGGATGCTCAAAAA CAGCGGCT GGTCG AGCCACCG TTCCTCGAGATTGTC allA 3043894 - 3043409 - | ureidoglycolate hydrolase rpe 3044611 - 3043910 - | ribulose-phosphate 3-epimerase (Pentose-5-phosphate 3-epimerase) (PPE) (R5P3E) TERM 1953 3044704 - 3044687 - H 78 -6.9 -4.59773 | overlap 3044688 CGCGAGCGGGAAAAA TCTGCCG GGTG CGGCAGG AAGTGCCGGGGTCAG BRADO2843 3044838 - 3045599 + | hypothetical protein BRADO2844 3046603 - 3045605 - | putative L-aminopeptidase/D-esterase TERM 1954 3046226 - 3046190 - G 77 -13.5 -3.59979 | opp_overlap 3046198 GCTGCCGAGCGCAAA GCTCGTCGTGGCGGCGG CCG CCGCCGCATAGCCGAGC TCGCGGTACGGCGCG BRADO2845 3049533 - 3046765 - | sensor histidine kinase TERM 1955 3049846 - 3049887 + G 73 -10.9 -3.62597 | gap 1, opp_overlap 3049845 CTGCGCGTCAATCAG TTCGAGGTCGT-CGAAGCGG GAA CCGCTCCGGACGGTCTCAAA TTGTTCCGCGCTCAG BRADO2847 3049771 - 3050172 + | putative two-component response regulatory protein. TERM 1956 3050280 - 3050249 - T 100 -19.6 -4.35524 | gap 1, opp_overlap 3050254, overlap 3050254 TCGCCAAAGTCAAAA CAGAACGCCCCGGTC CAT GACCGGGGCGTT-TG CATTTGACGTAACCG TERM 1957 3050276 - 3050254 - T 100 -20.6 -4.00132 | opp_overlap 3050254, overlap 3050249 AAAGTCAAAACAGAA CGCCCCGGTC CAT GACCGGGGCG TTTGCATTTGACGTA TERM 1958 3050254 - 3050276 + T 100 -20.6 -3.85165 | opp_overlap 3050254 3050249 AAAGTCAAAACAGAA CGCCCCGGTC CAT GACCGGGGCG TTTGCATTTGACGTA livK 3051430 - 3050312 - | high-affinity branched-chain amino acid ABC transporter (substrate-binding protein) livF 3052318 - 3051587 - | high-affinity branched-chain amino acid ABC transporter ATP-binding protein livG 3053148 - 3052315 - | high-affinity branched-chain amino acid ABC transporter ATP-binding protein livM 3054485 - 3053145 - | high-affinity branched-chain amino acid ABC transporter (permease protein) TERM 1959 3053170 - 3053189 + g 70 -3.6 -4.56597 | gap 1, opp_overlap 3053180 CCTTCCTTGACGAGG TCCGAGGAG ATG CTC-TTGGA TTTTTCCAGGAACAC livH 3055416 - 3054499 - | high-affinity branched-chain amino acid ABC transporter (permease protein) TERM 1960 3055769 - 3055749 - g 71 -9 -3.82378 | ACTGACCGACAAGAA CCAGGGTC ACCAG AACCCTGG ACAGAATCAGCAGGG BRADO2853 3055693 - 3055875 + | hypothetical protein BRADO2854 3056033 - 3056581 + | hypothetical protein catD 3057401 - 3056619 - | 3-oxoadipate enol-lactonase BRADO2856 3057635 - 3058081 + | putative carbon monoxide dehydrogenase, coxG accessory protein BRADO2857 3058227 - 3058712 + | putative carbon-monoxide dehydrogenase small subunit, coxS-like protein BRADO2858 3058762 - 3059619 + | putative carbon monoxide dehydrogenase medium subunit, coxM-like protein BRADO2859 3059642 - 3060550 + | ATPase BRADO2860 3060718 - 3061923 + | hypothetical protein BRADO2861 3061946 - 3062269 + | putative XdhC/CoxF family protein BRADO2862 3062273 - 3062974 + | putative XdhC/CoxI family protein TERM 1961 3063800 - 3063845 + G 70 -5.9 -4.20084 | gap 1, overlap 3063795 GCGCCGGAGGCGTTC CGGTGCTCGGCGCGCCCGGCTG CGC CCGCTCGCCG-GCCGAGAACGG TTTTGACTGGGTGCT BRADO2863 3062971 - 3064578 + | hypothetical protein TERM 1962 3064767 - 3064786 + F 74 -9.2 -3.8698 | overlap 3064769 TGATTGTCTCAACCG CCGCGCGA CGTG TCGCGCTG TTTGCATTTGGATTG BRADO2864 3064805 - 3065152 + | putative signal peptide BRADO2865 3065284 - 3065697 + | hypothetical protein adhA 3065832 - 3066857 + | alcohol dehydrogenase TERM 1963 3066919 - 3066870 - f 86 -17.7 -2.55544 | opp_overlap 3066879, overlap 3066866 TGATCATCGAAGGCA CGTGTTCAAGGCGGCCGCCTCGC ATCG GCGTGGCGGCCGTCTTGATCTGG ATCAGGATGACGGCG TERM 1964 3066879 - 3066910 + F 95 -20.8 -3.2794 | opp_overlap 3066870 3066866 AAGGCACGTGTTCAA GGCGGCCGCCTCGC ATCG GCGTGGCGGCCGTC TTGATCTGGATCAGG BRADO2867 3066958 - 3068238 + | putative Alpha-galactosidase (Melibiase) BRADO2868 3068420 - 3069034 + | TetR family transcriptional regulator BRADO2869 3069031 - 3069807 + | hypothetical protein BRADO2870 3069804 - 3070742 + | putative ABC transporter ATP-binding protein BRADO2871 3070739 - 3071896 + | putative ABC transporter (permease proteine) TERM 1965 3072935 - 3072897 - g 90 -18.1 -3.53012 | gap 1, opp_overlap 3072927 GGGCGCCGTTCGAAA CGCGCGACGCCGC-AGCG CAGG CGGTCGCGGCGGCGCGCG AGATGGTAGCGGCCA BRADO2872 3071936 - 3073246 + | putative adenylate cyclase BRADO2873 3073352 - 3075037 + | putative feruloyl esterase BRADO2874 3075503 - 3075042 - | hypothetical protein BRADO2875 3076338 - 3075514 - | hypothetical protein TERM 1966 3075776 - 3075758 - G 74 -10.2 -3.88498 | opp_overlap 3075758 3075760 3075761 CGTGCATAGACGAAA TCGCCGGC GAC GTCGGCGA TCGCCGGATATTTGC BRADO2876 3076491 - 3076691 + | hypothetical protein BRADO2877 3077031 - 3078164 + | putative dolichol-phosphate mannosyltransferase; putative membrane protein BRADO2878 3078161 - 3079678 + | putative glycosyl transferase BRADO2879 3080487 - 3079687 - | hypothetical protein BRADO2880 3080548 - 3080796 + | hypothetical protein TERM 1967 3080894 - 3080923 + F 81 -15.7 -3.08996 | opp_overlap 3080911, overlap 3080919 GGGAAGGGTTGAATG CTGCCGCTCCGGA ATCA TCCGGGGCGGCAA TATTGGATCGGCCTG BRADO2881 3081133 - 3082329 + | hypothetical protein TERM 1968 3082459 - 3082494 + F 93 -19.8 -3.04792 | gap 1, overlap 3082457 3082466 CTCGCTGCTCGACGG TGGGC-AAGCTGCCGCC TTT GGCGGCCGCTTTGCCCA TCTTACGAGTCCTGG TERM 1969 3082466 - 3082486 + F 81 -13.9 -3.6106 | overlap 3082457 3082459 CTCGACGGTGGGCAA GCTGCCGCC TTT GGCGGCCGC TTTGCCCATCTTACG BRADO2882 3083207 - 3083854 + | putative iron-sulfur-binding protein, subunit of an oxidoreductase like aldehyde oxidase or xanthine dehydrogenase BRADO2883 3083851 - 3084801 + | putative xanthine dehydrogenase, FAD binding subunit TERM 1970 3086927 - 3086889 - g 78 -6.5 -4.58773 | gap 1, overlap 3086891 CCGATGAAAGCAAAA GGCGTCGCCGAACTCGGC ATCT GCGGCGT-CGGTGCCGCC GTCGCAAATGCGGTC BRADO2884 3084804 - 3087023 + | putative xanthine dehydrogenase, molybdenum binding subunit BRADO2885 3087447 - 3087659 + | hypothetical protein BRADO2886 3087690 - 3088226 + | putative HNH endonuclease:HNH nuclease TERM 1971 3088241 - 3088293 + F 100 -33.6 -3.28712 | gap 1 ACGATGATCGCGTAG CCCGGATG-AGCCCACGTCGCCGCC GTCA GGCGGCGGCGTGGGCGACATCCGGG TTCTCACGCGCCGCG TERM 1972 3088506 - 3088561 + F 85 -14.6 -3.63627 | gap 1, opp_overlap 3088492 3088493 3088521 AGCGACGCCGAAGGT GGC-GCGTGCCCACAATCGGGCCGTAG TGC CTGCGGCGAGACGGTGGGCACGAAGCC TTTGCCGTCTCGAAG TERM 1973 3088747 - 3088774 + F 77 -14.8 -2.84812 | opp_overlap 3088741, overlap 3088750 GCCAGACCAGGGACA TCGCGCTGCCGC AACT GCGGCGGCGTGG TCTCGTCCTGTGCGT TERM 1974 3088750 - 3088771 + F 77 -15.1 -2.67992 | opp_overlap 3088741, overlap 3088747 AGACCAGGGACATCG CGCTGCCGC AACT GCGGCGGCG TGGTCTCGTCCTGTG TERM 1975 3088891 - 3088838 - f 71 -13.1 -3.07222 | gap 1, overlap 3088827 ACTAGCAGCGTAACA CGGCGGCGGGATCGTCCCTCTG-CCG AGA CGGCCAGAGAGACGATCCGAACGGCT CCGGTCCCCGGCGGG TERM 1976 3090349 - 3090382 + G 76 -15.4 -2.87344 | GCGATGGCGGGCGAG GGCGAGTTCGATCC GTTCAA GGATTGAGCTCGCC TGTGTGCCCCGCATG BRADO2887 3089035 - 3090375 + | hypothetical protein BRADO2888 3090532 - 3090774 + | hypothetical protein TERM 1977 3091229 - 3091187 - g 70 -10.6 -3.54029 | gap 2, opp_overlap 3091186 3091187 CTTCATCAATGACAA GGCGGTGCCGCGCGAACGTC TCCAG GACGT-CGT-CGGCACCGAC GCTTGTGGCGGCGGA lepB 3090771 - 3091544 + | Signal peptidase I (SPase I) (leader peptidase I) BRADO2890 3092142 - 3091546 - | putative isochorismatase family protein BRADO2891 3092266 - 3093105 + | LysR family transcriptional regulator TERM 1978 3093263 - 3093242 - T 77 -12.9 -3.53811 | overlap 3093243 GGTAGGGTGGGCAAA GCGGCCGCC GCCA GGCGGCGGC GTGCCCACCATCGTG TERM 1979 3093264 - 3093243 - T 72 -13.7 -2.72144 | gap 1, overlap 3093242 GTAGGGTGGGCAAAG CGGCCGCCGC CAG GCGGCGG-CG TGCCCACCATCGTGC TERM 1980 3093531 - 3093502 - T 79 -15.1 -2.91772 | opp_overlap 3093507, overlap 3093507 AATTCCCGCACAAAC GAAAACCCCGGCA TTGC TGCCGGGGTTTTG CAACGATCAGATGGA TERM 1981 3093507 - 3093526 + T 93 -15 -4.08767 | opp_overlap 3093507 3093502 CCGCACAAACGAAAA CCCCGGCA TTGC TGCCGGGG TTTTGCAACGATCAG TERM 1982 3093526 - 3093507 - T 100 -15 -4.61873 | opp_overlap 3093507, overlap 3093502 CCGCACAAACGAAAA CCCCGGCA TTGC TGCCGGGG TTTTGCAACGATCAG groEL 3095195 - 3093555 - | chaperonin GroEL groES 3095661 - 3095347 - | co-chaperonin GroES TERM 1983 3095548 - 3095560 + g 83 -9.1 -4.4078 | overlap 3095544 CACCGCGATCACTTC GCCCT GCG AGGGC TTTTCCTTGGCCGAG TERM 1984 3095885 - 3095900 + H 74 -4.6 -4.59773 | overlap 3095886 GCACCTGGGCTAAGT GGCTGC TAAT GCAGCA TTTTTCAACATGCCG BRADO2894 3096043 - 3096327 + | putative Usg protein BRADO2895 3096607 - 3096431 - | hypothetical protein TERM 1985 3096702 - 3096676 - gRH 76 -9.2 -4.08394 | opp_overlap 3096680 AGACTGTGGTCAAAA CGCCCGCCAAGC CGG GCAAGGCGGCCG CGCCGTCCGCGCGCA BRADO2896 3096558 - 3097148 + | hypothetical protein TERM 1986 3097177 - 3097202 + TFrH 78 -14.7 -3.10245 | opp_overlap 3097174 GGATGGAAACATCGT CGCGTGATGGC GGCG GCCGTCGCGCG TGTGTGTTGACGTCC TERM 1987 3097243 - 3097280 + TFrH 74 -11.9 -3.49102 | CACGGAGACGGACGG GCTGGCGACGAATGCGG AAGG TCGCGTTCGGCGCGGGC TTGTGTAAGGCGTAT TERM 1988 3097580 - 3097606 + GTr 72 -12.2 -3.28712 | overlap 3097561 3097578 ATCGCGGCCGAGATG GCCCGAGGGCGA TTC TCGTTCGCGGGC TTCTACGAGCGCCGC TERM 1989 3098175 - 3098200 + GTr 74 -12.5 -3.25823 | overlap 3098177 CCGGCGCCAACGCGC TGGCGCCGTGC CTCG GCGCGGCGCTG TTCCTGTGGAGCGGA TERM 1990 3098177 - 3098198 + GTr 83 -15.1 -3.19602 | overlap 3098175 GGCGCCAACGCGCTG GCGCCGTGC CTCG GCGCGGCGC TGTTCCTGTGGAGCG BRADO2898 3100582 - 3099332 - | hypothetical protein BRADO2897 3097460 - 3099394 + | hypothetical protein BRADO2899 3100701 - 3101927 + | hypothetical protein TERM 1991 3101998 - 3101952 - f 93 -19.7 -3.09516 | gap 2, overlap 3101987 GCCCGGATGAGCGAA GCGACATCCGGGTTCACCGACAC AGC GCGT-GA-GAACCCGGATGTCGC TACGCTCATCCGGGC BRADO2900 3102092 - 3102628 + | hypothetical protein TERM 1992 3102643 - 3102691 + T 83 -15.4 -3.21218 | gap 1, opp_overlap 3102644 3102679, overlap 3102644 GGCCCGGATGAGCGA AGCGACATCCGGGTTCAC-CG ACACAGCG CGTGAGAACCCGGATGTCGCA TTGCTCATCCGGGCT TERM 1993 3102644 - 3102690 + T 87 -18.9 -2.52516 | gap 1, opp_overlap 3102644 3102679, overlap 3102643 GCCCGGATGAGCGAA GCGACATCCGGGTTCAC-CG ACACAGCG CGTGAGAACCCGGATGTCGC ATTGCTCATCCGGGC TERM 1994 3102690 - 3102644 - T 93 -19.7 -3.09516 | gap 2, opp_overlap 3102643 3102644, overlap 3102679 GCCCGGATGAGCGAA GCGACATCCGGGTTCACCGACAC AGC GCGT-GA-GAACCCGGATGTCGC ATTGCTCATCCGGGC BRADO2901 3103468 - 3102716 - | putative oxidoreductase BRADO2902 3104273 - 3103515 - | hypothetical protein TERM 1995 3104384 - 3104362 - R 93 -16.2 -3.68351 | CCCGGATGAGCGAAA GCCGGCGCCC GGA GGGCGCGGGC GGGAGCGATATCCGG BRADO2903 3105312 - 3104464 - | hypothetical protein BRADO2904 3106337 - 3105393 - | hypothetical protein TERM 1996 3106452 - 3106474 + r 74 -14.9 -2.52464 | CACTTGCTCGGTGTA CCCTCTCCC CTTGT GGGAGAGGG TGGCTTCGCGAAGCG TERM 1997 3106548 - 3106492 - R 93 -18.9 -3.17075 | gap 1, opp_overlap 3106497 GCTTCGCGAAGCGAA GCCGGGTGAGGGGTCTCTCTCCGC GCTTGAATAT GCCGAGAGA-ACCCCTCACCCCGC GCCGAGCTGGCGCTC BRADO2906 3108057 - 3106639 - | hypothetical protein TERM 1998 3107935 - 3107972 + g 72 -5.4 -4.41348 | gap 1, opp_overlap 3107932 3107931 3107929, overlap 3107931 CCGGAACAACAGCTC CGCCTCGTGGCGGCGAT ATTCC AGCGCCTCCG-GTGGCG TTTCTTTCAGCCACC BRADO2908 3108286 - 3109023 + | hypothetical protein gpt 3109058 - 3109579 + | xanthine-guanine phosphoribosyltransferase BRADO2910 3109721 - 3110341 + | hypothetical protein TERM 1999 3110356 - 3110402 + T 71 -9.5 -3.68351 | gap 2 GCCCGGATGAGCGCA GCGATATCCGGGGTC-TCAC-GC GTG GCTGTGGTGAACCCGCATGTCGC TTTCGCTCATGCGGG BRADO2911 3111446 - 3110424 - | 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase BRADO2912 3111598 - 3112302 + | putative glutathione transferase TERM 2000 3112394 - 3112417 + F 84 -16 -3.09635 | gap 1 CGCGGAGCCTGTCAT CGGG-CCGCGC TGT GCGCGGACCCG TTGGCTCCTCGCAAT BRADO2913 3112570 - 3113172 + | putative DSBA oxidoreductase BRADO2914 3113172 - 3114152 + | putative oxidoreductase BRADO2915 3115335 - 3114445 - | enoyl-CoA hydratase TERM 2001 3115442 - 3115489 + r 75 -11.8 -3.54741 | gap 1, opp_overlap 3115453 3115455 3115468 3115469, overlap 3115443 GTGCGACATTCCGTA GGGTGGGCAAAGACGGCGGGCGC AAA GCGCGCGGCGGCGT-GCCCACCG TTTCCGCGGATGGTG TERM 2002 3115443 - 3115488 + r 78 -15.3 -2.7263 | gap 1, opp_overlap 3115453 3115455 3115468 3115469, overlap 3115442 TGCGACATTCCGTAG GGTGGGCAAAGACGGCGGGCGC AAA GCGCGCGGCGGCGT-GCCCACC GTTTCCGCGGATGGT BRADO2916 3117106 - 3115685 - | amidase TERM 2003 3116787 - 3116731 - G 93 -19.5 -2.73875 | gap 3, overlap 3116728 TCTTGGCGAAGATGA TCGCGCCGGCCTCGC-GCAGACGCGCCA CGGG CGGCGCGTCGGCTGCGA-GC-GGCGCGC GCGTGACGCTGGCTG TERM 2004 3117150 - 3117201 + r 78 -15.9 -2.71364 | opp_overlap 3117161 CAATTCCAGGCCCGC TCATTGACATACGTCAGGCGGCG TTAGGC CGCCGCCAGACGGGTCTCGATGA TCCTTGCGAACATGC TERM 2005 3117190 - 3117161 - R 83 -16.4 -2.91264 | opp_overlap 3117150 CCGCTCATTGACATA CGTCAGGCGGCG TTAGGC CGCCGCCAGACG GGTCTCGATGATCCT BRADO2917 3118336 - 3117173 - | putative amidohydrolase family protein; putative hippurate hydrolase (benzoylglycine amidohydrolase) BRADO2918 3120078 - 3118573 - | hypothetical protein BRADO2919 3121947 - 3120301 - | ABC transporter ATP-binding protein TERM 2006 3121986 - 3122031 + r 75 -13.9 -3.06183 | opp_overlap 3121987 3121991 3121995 GCGAGGAGCGAAGCG ACGAAGCAATCCAGGGGCTCC GGGC GCGGCCCCTGGATCGCGTCGC TTCGCTCGCGATGAC TERM 2007 3122030 - 3121987 - R 83 -17.4 -2.55544 | opp_overlap 3121986, overlap 3121991 3121995 CGAGGAGCGAAGCGA CGAAGCAATCCAGGGGCTCC GGGC GCGGCCCCTGGATCGCGTCG CTTCGCTCGCGATGA TERM 2008 3122026 - 3121991 - R 83 -15.4 -3.22388 | opp_overlap 3121986, overlap 3121987 3121995 GAGCGAAGCGACGAA GCAATCCAGGGGCTCC GGGC GCGGCCCCTGGATCGC GTCGCTTCGCTCGCG TERM 2009 3122022 - 3121995 - R 71 -11.2 -3.41581 | opp_overlap 3121986, overlap 3121991 3121987 GAAGCGACGAAGCAA TCCAGGGGCTCC GGGC GCGGCCCCTGGA TCGCGTCGCTTCGCT BRADO2920 3122949 - 3122059 - | putative ABC transporter (permease protein); putative membrane protein BRADO2921 3123902 - 3122961 - | putative ABC transporter (permease protein); putative membrane protein TERM 2010 3124214 - 3124192 - R 76 -8.5 -4.19735 | gap 1, overlap 3124193 TCCCGGAAAATGAAA CCGTGCTGCT GCGC AGCAGCA-GG TGGGTAGCCCGGGAG TERM 2011 3124395 - 3124415 + r 81 -13.9 -3.53811 | GCACGATGGTGGCAC GCTGCCGCC TGC GGCGGCTGC TTTGCCCACCCTAGA BRADO2922 3125578 - 3124448 - | carboxypeptidase TERM 2012 3126520 - 3126490 - g 74 -7.4 -4.25256 | overlap 3126514 GGTGTACGAAAAGAA CGCCGACTACGTGC CGC GCAAGGAGCCCGCG AGCTGGACGTCGGGC BRADO2923 3125852 - 3127459 + | putative ABC transporter (substrate-binding protein); putative exported protein TERM 2013 3127507 - 3127486 - f 83 -17.3 -2.64616 | opp_overlap 3127486 TTGCGAGCGATACGA GCGGCGGAG GCAA CTCCGCCGC TTTTTCATGCGGTGC TERM 2014 3127486 - 3127507 + F 100 -17.3 -4.7373 | opp_overlap 3127486 TTGCGAGCGATACGA GCGGCGGAG GCAA CTCCGCCGC TTTTTCATGCGGTGC TERM 2015 3127561 - 3127540 - f 77 -12.9 -3.53811 | overlap 3127541 CGTAGGGTGGGCAAA GCGGCCGCC GCTA GGCGGCGGC GTGCCCACCGCCGGG TERM 2016 3127562 - 3127541 - f 72 -13.7 -2.72144 | gap 1, overlap 3127540 GTAGGGTGGGCAAAG CGGCCGCCGC TAG GCGGCGG-CG TGCCCACCGCCGGGC TERM 2017 3128564 - 3128534 - g 71 -9.6 -3.84406 | overlap 3128558 GGTCTACGAGAAGAA CACCGACTACGTGC CGC GCAAGGAGCCGGCG AGCTGGACGGCGGGC TERM 2018 3129365 - 3129350 - g 77 -3.2 -4.93296 | CGAGGAGCAGAAAAA GATCGC GACC GAGATC CAGAAGCTGAACTAC BRADO2924 3127890 - 3129503 + | putative ABC transporter (substrate-binding protein) TERM 2019 3129979 - 3129998 + F 85 -10 -4.371 | GGCGTCTGTCCAACG CCTCGCGA CGGA TCGTGAGG TTTTGATCTGGTCAG BRADO2925 3130109 - 3131659 + | putative ABC transporter substrate-binding protein BRADO2926 3133293 - 3131824 - | putativ methyl-accepting chemotaxis protein TERM 2020 3132913 - 3132952 + g 100 -19.4 -3.39449 | gap 1, overlap 3132917 CTCCGACTGGTTGTT CGAGGCCCCGATCAGGCGC GCC GCG-CTGATCGAGGCTTCG TTGCTGTTGATGCAG TERM 2021 3132917 - 3132948 + g 80 -15.2 -3.4617 | gap 1, overlap 3132913 GACTGGTTGTTCGAG GCCCCGATCAGGCGC GCC GCG-CTGATCGAGGC TTCGTTGCTGTTGAT BRADO2927 3133431 - 3133766 + | Ars family transcriptional regulator BRADO2928 3133804 - 3134244 + | hypothetical protein BRADO2929 3134296 - 3134931 + | putative glutathione S-transferase GSTF2 (GST-II) TERM 2022 3135271 - 3135254 - g 77 -12.7 -3.62572 | TACGATCAGGCGAAA GGCGGAG GCAG CTCCGCC GGGGTGAGCAAGCCC TERM 2023 3136093 - 3136072 - g 72 -5.7 -4.33258 | opp_overlap 3136084, overlap 3136059 3136073 ATGCGGAAAGACAAA CGCCTTGCC CGCG GGCATGGCC ATCTATCAGGCTTCT BRADO2930 3135092 - 3136690 + | hypothetical protein TERM 2024 3136784 - 3136730 - f 74 -10.5 -3.72576 | overlap 3136696 3136731 3136779 3136780 CGCGTGGTCATGAAA CGTCCGATTTTGTCGGCGGCGGCCC TCAGC GTGCCGCCGCGGTCGAAAACGCACA TCGCGCATGATTGTT BRADO2931 3136811 - 3138427 + | hypothetical protein BRADO2932 3139276 - 3138545 - | putative short chain oxidoreductase BRADO2933 3139748 - 3139542 - | hypothetical protein BRADO2934 3139870 - 3140334 + | putative signal peptide BRADO2935 3141544 - 3140345 - | putative salicylate hydroxylase (salicylate 1-monooxygenase) TERM 2025 3140746 - 3140788 + g 70 -11.2 -3.59979 | CGACGGCATTGAGCA GCAGCC-GCGCCGTCGCCGG CCAGC CCGGCGG-GGCGAAGGCGGC TTTCAGCTCGGCCGG BRADO2936 3141797 - 3141555 - | hypothetical protein BRADO2937 3142118 - 3143260 + | putative signal peptide BRADO2938 3143304 - 3144059 + | putative hydrolase BRADO2939 3145577 - 3144162 - | hypothetical protein BRADO2940 3145974 - 3146801 + | serine acetyltransferase BRADO2941 3147074 - 3147286 + | hypothetical protein BRADO2942 3148313 - 3147615 - | hypothetical protein BRADO2943 3148510 - 3148839 + | putative exported protein BRADO2944 3148927 - 3149457 + | hexapeptide repeat-containing protein BRADO2945 3149659 - 3149492 - | hypothetical protein BRADO2946 3149940 - 3149656 - | hypothetical protein BRADO2947 3150104 - 3150289 + | hypothetical protein BRADO2948 3150286 - 3150609 + | hypothetical protein TERM 2026 3151019 - 3150998 - g 74 -12.3 -3.62046 | gap 1 CTACGTCGTCAAGAA GCGCGTGCGC ACT GCGCACG-GC TGGCGTCTGCGTCCG BRADO2949 3150753 - 3151052 + | hypothetical protein BRADO2950 3151194 - 3151331 + | hypothetical protein TERM 2027 3151482 - 3151448 - f 78 -15.6 -2.71144 | opp_overlap 3151455 3151477, overlap 3151404 CATGCCGCCCAACGA TGGGCACGCTGCCGCC TTC GGCGGCTGCTTTCCCA TCCTACGAGGCTGTG TERM 2028 3151455 - 3151475 + F 81 -13.9 -3.62096 | opp_overlap 3151404 3151448 CCCAACGATGGGCAC GCTGCCGCC TTC GGCGGCTGC TTTCCCATCCTACGA TERM 2029 3152357 - 3152313 - g 74 -2.6 -4.73388 | overlap 3152330 3152331 AAGCTCGAGGAAAAA GGCGGCAACGGCAAGAAGCC GAAGG AGCCTCGGGCCTCCACCACC GATCCGCAGGCGCGG BRADO2951 3151548 - 3152906 + | putative transposase TERM 2030 3152910 - 3152895 - Tf 72 -3.9 -4.56775 | overlap 3152896 3152906 ATCGCCTGTCAAAAA GCAGC ATCATA GCCGC CGATAGCGGCATCCG BRADO2952 3153863 - 3153051 - | putative carboxymethylenebutenolidase precursor (dienelactone hydrolase; DLH) TERM 2031 3153349 - 3153322 - Gf 70 -7.6 -4.07568 | gap 1 GGGCTCTTTGGAAAA GCCGCGCTGGGCG GAT CGGTCAGCG-GGC CGTAGAAGGCGACGG TERM 2032 3154122 - 3154087 - gR 100 -19.1 -3.9392 | overlap 3154090 CTCGACTCCAAAGAA CAAGGCCGTCGGCGC AGTATG GCGCCAACGACCTTG CCAGCCCCGGATATT TERM 2033 3154119 - 3154090 - gR 93 -15 -4.09628 | overlap 3154087 GACTCCAAAGAACAA GGCCGTCGGCGC AGTATG GCGCCAACGACC TTGCCAGCCCCGGAT BRADO2953 3153841 - 3154161 + | hypothetical protein BRADO2954 3154800 - 3154282 - | hypothetical protein TERM 2034 3154837 - 3154827 - RH 100 -5.4 -5.68023 | CCACAATCAAAAAAA GCTT CGG AAGC CGCCCCGGAATGGGA TERM 2035 3154883 - 3154863 - RH 73 -8.9 -4.09685 | TGGGAGCGGCGAAAA GGCGAGTCC CAG GACCTCGCC GCGGCAGCAAAACGC TERM 2036 3154964 - 3154954 - RH 71 -4.6 -4.44974 | overlap 3154955 3154958 GCAAATCGGACAAAA GCGA GAC CCGC AAGATCGCGGGCGAC BRADO2955 3155340 - 3155053 - | hypothetical protein BRADO2956 3155339 - 3155518 + | hypothetical protein TERM 2037 3155637 - 3155603 - TR 100 -10 -5.47399 | gap 1, overlap 3155592 3155604 3155605 GCAAGGCCAAAAAAA GTTGCGGCCAGCCCT TGGGGG AGAGCTGGCCGCG-C GCGAACCGGTCTGGG TERM 2038 3155637 - 3155604 - TR 76 -10.2 -3.87355 | overlap 3155592 3155603 3155605 CAAGGCCAAAAAAAG TTGCGGCCAGCCCT TGGGGG AGAGCTGGCCGCGC GCGAACCGGTCTGGG TERM 2039 3155636 - 3155605 - TR 74 -13.7 -2.91328 | overlap 3155592 3155603 3155604 AAGGCCAAAAAAAGT TGCGGCCAGCCCT TGGGGG AGAGCTGGCCGCG CGCGAACCGGTCTGG BRADO2957 3156328 - 3155732 - | putative signal peptide TERM 2040 3156160 - 3156190 + g 72 -13.2 -3.15249 | opp_overlap 3156157 TCTGGGACAGCACGA TGTCGCGGGGCTGC GAC GCACCGCCGCGGCA TTCCTCGGGAGTCTC BRADO2958 3157298 - 3156690 - | hypothetical protein TERM 2041 3157445 - 3157424 - R 73 -10.8 -3.53811 | GGTAGGGTGGGCAAA GGCGCGGC CGTGCT GCCGCACC GGGCAACTATCGCAG BRADO2959 3158138 - 3157581 - | hypothetical protein TERM 2042 3158489 - 3158479 - H 85 -3.2 -5.28176 | overlap 3158481 CGGACGCAGAAAAAA GACC GGC GATC TCGCGAGGGAGGGCT TERM 2043 3158494 - 3158522 + H 100 -13.9 -4.87389 | opp_overlap 3158481 GACCGGCGATCTCGC GAGGGAGGGCTTT CTC AGGGCTCTCCCTC TTTCTTTTTCAGATC BRADO2960 3158654 - 3159451 + | hypothetical protein BRADO2961 3159736 - 3160164 + | hypothetical protein BRADO2962 3161161 - 3160151 - | hypothetical protein TERM 2044 3160315 - 3160269 - G 91 -11.5 -4.25104 | overlap 3160251 3160270 3160307 3160309 3160310 GCCGCGCGATGAAAA TCGAACCAGCCGATCTGGCCG ACGCG CGGCGAGATCAACAGGTCCGG CGGATCGCCGGCGAG TERM 2045 3160314 - 3160270 - G 76 -15 -3.14848 | overlap 3160251 3160269 3160307 3160309 3160310 CCGCGCGATGAAAAT CGAACCAGCCGATCTGGCCG ACGCG CGGCGAGATCAACAGGTCCG GCGGATCGCCGGCGA BRADO2963 3161757 - 3162506 + | hypothetical protein BRADO2964 3162755 - 3164206 + | putative transposase BRADO2965 3165839 - 3164481 - | putative transposase TERM 2046 3165030 - 3165074 + g 79 -4.8 -4.73388 | overlap 3165042 CCGCGCCTGCGGATC GGTGGTGGAGGCCCGAGGCT CCTTC GGCTTCTTGCCGTTACCGCC TTTTTCCTCGAGCTT TERM 2047 3166001 - 3166021 + r 81 -13.9 -3.53811 | ATGGACGGTGGGCAC GCTGCCGCC TCC GGCGGCCGC TTTGCCCACGCTACG BRADO2966 3166718 - 3166080 - | TetR family transcriptional regulator BRADO2967 3166817 - 3167662 + | hypothetical protein BRADO2968 3168393 - 3170909 + | hypothetical protein TERM 2048 3170925 - 3170978 + T 100 -22.5 -3.41602 | gap 1, overlap 3170967 TGCACCGATGTGTAG CCCGGATG-AGCTCGAGCCTGCGCCC GCA GGGCGAAGGCTGGAGCGATATCCGGG TTCTCATCGGCTGCG TERM 2049 3170967 - 3171013 + T 84 -16.7 -3.09516 | gap 1, overlap 3170925 AGGGCGAAGGCTGGA GCGATATCCGGGTTCTCAT-CG GCTG CGTGTGTGACCCCGGATATCGC TTCGCTCATCCGGGC TERM 2050 3171134 - 3171118 - T 81 -13.7 -3.61398 | overlap 3171084 GGTCGTCCCGAAGAA GCGTGCC GCG GGCACGC GCCGATCCGGGACCC BRADO2969 3171805 - 3171263 - | putative NADH oxidase/flavin reductase family protein TERM 2051 3172237 - 3172258 + G 72 -11.5 -3.54424 | overlap 3172245 3172247 CCTCAATGCGCTGCT CAGCGACCG AGCG CGGGCGCTG TTTCCGCACGTCGCG BRADO2970 3172097 - 3173011 + | hypothetical protein thrS 3175207 - 3173141 - | threonyl-tRNA synthetase BRADO2973 3175614 - 3176876 + | hypothetical protein BRADO2974 3176952 - 3178142 + | putative inner membrane transport protein TERM 2052 3178192 - 3178180 - f 76 -9.1 -4.07687 | AGGCGCTTGGCAAAA CCGGT CGG ACCGG ATTAAAGCCGCTGGG BRADO2975 3178302 - 3178673 + | putative signal peptide BRADO2976 3179831 - 3178701 - | putative alpha/beta-hydrolase family protein TERM 2053 3178987 - 3178977 - G 74 -2.4 -4.7373 | overlap 3178978 3178979 GGAGCTGATGAAAAA GCCG GAG CGGT TGCGCTCGATCCAGT BRADO2977 3180271 - 3181644 + | putative amino acid transporter BRADO2978 3181648 - 3182880 + | putative signal peptide BRADO2979 3183228 - 3182989 - | hypothetical protein BRADO2980 3183639 - 3183376 - | hypothetical protein TERM 2054 3183658 - 3183641 - R 74 -9.1 -3.85539 | gap 1, opp_overlap 3183648, overlap 3183642 TACAGCCAGATCAAA GCGC-GCG CGC CGCGGCGC GGCATGTGTGACAGC BRADO2981 3183820 - 3183710 - | hypothetical protein BRADO2982 3183992 - 3184888 + | putative signal peptide BRADO2983 3185425 - 3184967 - | hypothetical protein TERM 2055 3185468 - 3185443 - H 71 -12.6 -3.05343 | gap 1, opp_overlap 3185466 3185467, overlap 3185445 GTCAGACGTCCAAGA GATCCCGCCGG AATTA CCGGCGGG-TC GGCCTTGGCGGCCGG TERM 2056 3185814 - 3185831 + G 70 -8.3 -3.90318 | overlap 3185786 3185825 CCCGGCCGTCGCGCG CCGAGGC GGAA GCCGCGG TTTATACGCTGCTCA folE 3185666 - 3186373 + | GTP cyclohydrolase I TERM 2057 3186351 - 3186381 + F 74 -11.8 -3.41302 | overlap 3186349 CCCGCTTCCTCTCCA TGGTGCGCTCGCCG CAA CGCTGAGCGCAGCA TATTTCGGCTGTTAC hisI 3186452 - 3186844 + | phosphoribosyl-AMP cyclohydrolase TERM 2058 3187186 - 3187216 + G 100 -20.4 -3.98826 | GACTTCAACCCGACC GCCGGCGCGTCGAC ATC GTCGGCGCGCGGGC TTTATCAGTTCATCG BRADO2986 3187030 - 3188061 + | hypothetical protein BRADO2987 3188341 - 3189516 + | hypothetical protein TERM 2059 3189587 - 3189541 - T 81 -15.9 -3.09516 | gap 1, opp_overlap 3189527 GCCCGGATGAGCGAA GCGATATCCGGGTTCTC-CGAG GCAG CTCGCGTGACCCCGGATGTCGC TGCGCTCATCCGGGC TERM 2060 3189724 - 3189749 + T 81 -13.9 -3.53811 | overlap 3189714 ATGGACGGTGGGCAC GCGACCGCCGC TTTC GCGGCGGCTGC TTTGCCCACCCTACA BRADO2988 3190358 - 3189774 - | two-component sensor protein BRADO2989 3190966 - 3190478 - | response regulator receiver (CheY-like protein) TERM 2061 3191233 - 3191190 - R 91 -19 -3.06183 | opp_overlap 3191195 3191199, overlap 3191195 3191199 GTCATTGCGAGCGAA GCGAAGCAATCCAGAGTCGC GGGC GGGATCCTGGATTGCTTCGC TGCGCTCGCAATGAC ppnK 3192064 - 3191285 - | inorganic polyphosphate/ATP-NAD kinase BRADO2991 3194490 - 3192337 - | adenylate/guanylyl cyclase TERM 2062 3193772 - 3193794 + g 91 -15.6 -3.96148 | AAGTTCAGGGTCATG GTGCCGGGCA CGC TGCTCGGCAC TTTGTAGTCGCCGAG BRADO2992 3195165 - 3194503 - | putative signal peptide TERM 2063 3196500 - 3196483 - g 70 -10.5 -3.65046 | opp_overlap 3196482 GTTCGATCGCAAGAA CGGCCGA GTCA CCGGCCG CTATGATGGCTCGGT TERM 2064 3196591 - 3196648 + G 71 -14.7 -2.6472 | gap 1, overlap 3196647 CGTGCTCACCGCGCC GCTGACCGGCGCGGCGGTCGAGCTGACG ACG CGCAAGCTCAACTGGCGC-CCGGACGGC TCCTATGAGCTCTTG BRADO2993 3195386 - 3196957 + | putative peptidase S10, serine carboxypeptidase; putative signal peptide BRADO2994 3198436 - 3197048 - | putative beta lactamase family protein; putative D-alanyl-D-alanine carboxypeptidase TERM 2065 3197812 - 3197828 + g 74 -5.7 -4.56775 | CGAGGCGCGAATGGC CGCGTGC GAA GGGCGCG TTTTTCGCGAGCAGT TERM 2066 3198608 - 3198585 - R 82 -14.6 -3.29511 | gap 1, opp_overlap 3198556 CGCAGTTTCGGAGAA CCCGGGTG-GC TTC GCTCACCCGGG CTACGACTATAACAA TERM 2067 3198661 - 3198624 - R 100 -20.7 -3.85864 | overlap 3198630 CTACGACTATAACAA CGAAAATGGCGCAACCC TTTC GGGTTGCGCCACTGTCG AGATCGGATCAGGTC TERM 2068 3198655 - 3198630 - R 100 -19.1 -4.59414 | overlap 3198624 CTATAACAACGAAAA TGGCGCAACCC TTTC GGGTTGCGCCA CTGTCGAGATCGGAT BRADO2995 3199224 - 3198688 - | putative signal peptide BRADO2996 3199519 - 3199911 + | hypothetical protein TERM 2069 3199940 - 3199976 + GF 93 -19.3 -2.65271 | overlap 3199930 TCGTCGCATGCCCGT CCTGCCGCCGGCGCGCC TCG GGCATGCCGGCGGCGGC TCCTGTCAGCTTGTG BRADO2997 3199932 - 3200186 + | hypothetical protein BRADO2998 3200062 - 3200508 + | putative signal peptide BRADO2999 3200878 - 3200711 - | hypothetical protein BRADO3000 3200899 - 3201612 + | putative outer-membrane immunogenic protein precursor; putative secreted protein TERM 2070 3201655 - 3201676 + F 100 -15.1 -4.39166 | opp_overlap 3201648 CGATCACATGTGACA CGCCCGCGC CCCG GTGCGGGCG TTTTGCTGTGTCCGA BRADO3001 3201894 - 3202049 + | hypothetical protein TERM 2071 3202057 - 3202113 + T 78 -12.2 -3.80893 | gap 1, overlap 3202059 3202061 3202062 3202064 CGCCGTAGTCCGGAC GTCATGGCAACGCTG-CAGCGGGCAGC TCCG GCTGCCCGCTGATCGCGGTGTCGTCTC TTTGAATTGTCCCGT TERM 2072 3202059 - 3202111 + T 79 -13.4 -3.48766 | gap 1, overlap 3202057 3202061 3202062 3202064 CCGTAGTCCGGACGT CATGGCAACGCTG-CAGCGGGCAGC TCCG GCTGCCCGCTGATCGCGGTGTCGTC TCTTTGAATTGTCCC TERM 2073 3202061 - 3202109 + T 88 -16 -3.31177 | gap 1, overlap 3202059 3202057 3202062 3202064 GTAGTCCGGACGTCA TGGCAACGCTG-CAGCGGGCAGC TCCG GCTGCCCGCTGATCGCGGTGTCG TCTCTTTGAATTGTC TERM 2074 3202062 - 3202108 + T 83 -17.3 -2.57983 | gap 1, overlap 3202061 3202059 3202057 3202064 TAGTCCGGACGTCAT GGCAACGCTG-CAGCGGGCAGC TCCG GCTGCCCGCTGATCGCGGTGTC GTCTCTTTGAATTGT TERM 2075 3202064 - 3202106 + T 81 -16.3 -2.81937 | gap 1, overlap 3202062 3202061 3202059 3202057 GTCCGGACGTCATGG CAACGCTG-CAGCGGGCAGC TCCG GCTGCCCGCTGATCGCGGTG TCGTCTCTTTGAATT BRADO3002 3202450 - 3202202 - | hypothetical protein TERM 2076 3202601 - 3202587 - R 78 -6.4 -4.58685 | AAATTTTTGGAAAAA GAATCC GTG GGACTC CGGAGGTAGAATCGC BRADO3003 3203414 - 3202779 - | hypothetical protein TERM 2077 3203912 - 3203931 + r 86 -16.4 -3.14132 | opp_overlap 3203912 TCCAGATCGCAAAAA GGGCGGCC GTGA GGCCGCCC TTCGTACAAGCCGGA TERM 2078 3203931 - 3203912 - R 100 -16.4 -4.64766 | opp_overlap 3203912 TCCAGATCGCAAAAA GGGCGGCC GTGA GGCCGCCC TTCGTACAAGCCGGA BRADO3004 3204440 - 3203961 - | putative signal peptide BRADO3005 3204688 - 3205149 + | putative signal peptide BRADO3006 3205209 - 3205688 + | putative signal peptide TERM 2079 3205710 - 3205746 + T 91 -19.4 -3.06969 | opp_overlap 3205707, overlap 3205715 GGTCTGACACCATCC GCACACGCCCGCTCGC ATGCC GCGCGCGGGCGTTTGC TATTGCGCTCCCTTC TERM 2080 3205715 - 3205741 + T 95 -16.5 -3.93038 | opp_overlap 3205707, overlap 3205710 GACACCATCCGCACA CGCCCGCTCGC ATGCC GCGCGCGGGCG TTTGCTATTGCGCTC BRADO3007 3206675 - 3205782 - | putative rRNA methylase; putative 23S rRNA (guanosine-2'-O-)-methyltransferase rlmB-like BRADO3008 3207097 - 3206798 - | hypothetical protein TERM 2081 3207616 - 3207648 + G 70 -10.6 -3.50393 | gap 1, overlap 3207600 GAGCAGCTGCCGCTG CTGCACCTCTGGTCG CTGT CGCTC-GAGGTGCAG TTCTATGCCCTGGCG BRADO3009 3207214 - 3209112 + | putative acyltransferase TERM 2082 3209331 - 3209345 + G 71 -9.2 -3.7941 | ACATCGGGGCGGAAG GCCGGC CAA GCTGGC TTGTTATGCGGCGTC TERM 2083 3209626 - 3209612 - g 77 -12.8 -3.6682 | CTCGACCGACGCAAA GCCGGC CGC GCCGGC CGCCGCAGACACGGC BRADO3011 3209139 - 3210278 + | hypothetical protein BRADO3012 3210415 - 3211017 + | hypothetical protein TERM 2084 3211047 - 3211022 - f 100 -19.7 -4.74132 | opp_overlap 3211015 AGAGCGGATGAAAAA CGCGGCGGGCC ATCC GACCCGCCGCG TTCCAGATCTTGAAC BRADO3013 3211300 - 3211590 + | hypothetical protein BRADO3014 3212016 - 3211690 - | hypothetical protein BRADO3015 3213144 - 3212203 - | LysR family transcriptional regulator TERM 2085 3213179 - 3213159 - H 81 -10.5 -4.13767 | CGGGCGATCCGAAAA GCGTTGACT TGC AGTCAACAC TAACGCCGCGGGCTG BRADO3016 3213254 - 3214135 + | putative 3-hydroxyisobutyrate dehydrogenase BRADO3017 3214132 - 3215676 + | putative aldehyde dehydrogenase family protein BRADO3018 3215753 - 3216709 + | N-carbamoyl-D-amino acid hydrolase (D-N-alpha-carbamilase) TERM 2086 3216815 - 3216836 + F 77 -12.9 -3.53811 | CGCGATGGTGGGCAC GCTGCCGCC TATC GGCGGCTGC TTTGCCCACCCTACA BRADO3019 3217073 - 3218674 + | putative ABC transporter periplasmic-binding protein; putative oligopeptide/dipeptide ABC transporter BRADO3020 3218689 - 3219630 + | putative ABC transporter permease protein; putative oligopeptide/dipeptide transport protein BRADO3021 3219627 - 3220544 + | putative ABC transporter permease protein; putative oligopeptide/dipeptide ABC transporter BRADO3022 3220579 - 3221568 + | ABC transporter ATP-binding protein, putative oligo/dipeptide transport protein TERM 2087 3221813 - 3221856 + G 70 -13 -3.03243 | gap 1 GCGCATCGACGATCT CGGCCCGCAC-CGGCTGCGCG AGA TGCGCCGCCGCGTCCAGGTCG TGTTCCAGGATCCGT BRADO3023 3221565 - 3222539 + | ABC transporter protein, ATP-binding protein; putative oligopeptide/dipeptide ABC transporter, ABC transporter TERM 2088 3222548 - 3222573 + F 85 -15.5 -3.4072 | gap 1 TGTGTGAAGCCGTAG CCCGGATGAGCG CAG CGC-CATCCGGG TTCTCATGACCAGTG csaA 3223211 - 3223582 + | secretion chaperone CsaA protein TERM 2089 3225222 - 3225177 - g 73 -14.7 -2.81872 | gap 1, overlap 3225172 GCGAGGACAAGATCA CGGCGGA-TGCGATCCGCTTCA CGT CGGAGCTGATCGCTGTCCGCCG CACCCATCCGGCGCT TERM 2090 3225490 - 3225460 - g 74 -12.5 -3.61398 | gap 1 CGTGGTCGGCAACAA CGGCGCGGTGACCG CGAA CGGCC-CCGCGCTG CACGGCCAGCCGAGC BRADO3025 3223598 - 3225559 + | putative 1,4-alpha-glucan branching enzyme TERM 2091 3225667 - 3225687 + T 81 -13.9 -3.53811 | ATCCACGGTGGGCAC GCCGCCGCC TTC GGCGGCCGC TTTGCCCACCCTACG BRADO3026 3226805 - 3225876 - | hypothetical protein TERM 2092 3226727 - 3226713 - G 77 -7 -4.52857 | ATGCTCGACATAAAA GCGGGC CTG GTCCGC GGTGAGGAATCTTGC BRADO3027 3227829 - 3226792 - | hypothetical protein BRADO3028 3228034 - 3228765 + | putative MutT/nudix family protein BRADO3030 3229467 - 3228898 - | hypothetical protein TERM 2093 3229708 - 3229670 - H 74 -6.1 -4.52589 | gap 2, overlap 3229678 GCTTTTGAGAGAAAA TGTTAATACCGCTCGGCCA AGT TGGCCG-GCG-TAGTCACA AGACAACGGAGTCTC BRADO3031 3229727 - 3231826 + | putative methyl-accepting chemotaxis receptor/sensory transducer BRADO3032 3232048 - 3233274 + | putative L-carnitine dehydrogenase TERM 2094 3233323 - 3233285 - T 72 -12.4 -3.29511 | opp_overlap 3233275 3233274 TGTAGGGCGCGACAA TCGCGGCATTCTCCGG TGTCGTC CCGGCGAACGCCGGGA CCCATAACCACCGGC BRADO3033 3233697 - 3233437 - | putative signal peptide BRADO3034 3234478 - 3233810 - | TetR family transcriptional regulator BRADO3035 3234715 - 3235950 + | putative acyl-CoA dehydrogenase TERM 2095 3236009 - 3235975 - f 86 -15.6 -3.53811 | CGTAGGGTGGGCAAA GCGTCCGGCTGTGCGC GAA GCGCGCAGGCGGAGGC GTGCCCACCATTCGC TERM 2096 3236157 - 3236115 - f 100 -23.6 -3.06183 | opp_overlap 3236115 3236120 3236124, overlap 3236120 3236124 GTCATTGCGAGCGAA GCGAAGCAATCCAGAGTCCC GGC GGAGCCCTGGATTGCTTCGC TTCGCTCGCAATGAC TERM 2097 3236115 - 3236157 + F 100 -21.4 -3.06183 | opp_overlap 3236115 3236120 3236124, overlap 3236120 3236124 GTCATTGCGAGCGAA GCGAAGCAATCCAGAGTCCC GGC GGAGCCCTGGATTGCTTCGC TTCGCTCGCAATGAC TERM 2098 3236152 - 3236120 - f 80 -14.9 -3.19192 | opp_overlap 3236115 3236120 3236124, overlap 3236115 3236124 TGCGAGCGAAGCGAA GCAATCCAGAGTCCC GGC GGAGCCCTGGATTGC TTCGCTTCGCTCGCA TERM 2099 3236120 - 3236152 + F 73 -12.7 -3.19192 | opp_overlap 3236120 3236115 3236124, overlap 3236115 3236124 TGCGAGCGAAGCGAA GCAATCCAGAGTCCC GGC GGAGCCCTGGATTGC TTCGCTTCGCTCGCA TERM 2100 3236211 - 3236178 - f 85 -10.2 -4.3534 | gap 1, overlap 3236179 TCGCAATGACGAAAA GGACGATCGGCGGAC AACGG GGCCGCCGCTCG-CC GGATCAGAGACAGAA TERM 2101 3236211 - 3236179 - f 73 -12.6 -3.20722 | overlap 3236178 CGCAATGACGAAAAG GACGATCGGCGGAC AACGG GGCCGCCGCTCGCC GGATCAGAGACAGAA BRADO3036 3236250 - 3237308 + | putative aminoglycoside phosphotransferase TERM 2102 3237346 - 3237326 - T 81 -13.9 -3.53811 | CGTAGGGTGGGCAAA GCGGCCGCC GAC GGCGGCGGC GTGCCCACCATCTGA BRADO3037 3237647 - 3237477 - | hypothetical protein BRADO3038 3238825 - 3237995 - | hypothetical protein BRADO3040 3239341 - 3239649 + | hypothetical protein TERM 2103 3239775 - 3239748 - T 95 -11.2 -4.58395 | overlap 3239750 GTCATCCCGGAAAAA TACCGGCAGCGC GACT GCGCTGGCGGTG CGCAGAGCCGGGATC TERM 2104 3239773 - 3239750 - T 86 -13.8 -3.90762 | overlap 3239748 CATCCCGGAAAAATA CCGGCAGCGC GACT GCGCTGGCGG TGCGCAGAGCCGGGA BRADO3041 3240871 - 3240086 - | putative short-chain dehydrogenase/reductase SDR family protein BRADO3042 3241016 - 3241723 + | putative phosphoglycerate mutase family protein TERM 2105 3241801 - 3241745 - f 95 -20.2 -3.30124 | gap 1 TTGTAGCCCGCATAA GCGTAGCGACATGCGGGTTCAC-CGAG AGAG CTCGTGAGACCCCGGATGTCGCTGCGC TCATCCGGGCTACGC TERM 2106 3242083 - 3242072 - f 72 -2.2 -4.78572 | overlap 3242082 GTTGAACTAACAAAA CCTA TAAC CAGG AGGAACTCCCCATGA BRADO3043 3242095 - 3242862 + | putative short-chain dehydrogenase/reductase SDR BRADO3044 3244419 - 3243184 - | beta-lactamase family penicillin binding protein BRADO3045 3245979 - 3244750 - | putative branched-chain amino acid ABC transporter, substrate-binding protein BRADO3046 3246435 - 3246593 + | putative preprotein translocase secE subunit nusG 3246593 - 3247150 + | transcription antitermination protein NusG TERM 2107 3247237 - 3247256 + F 73 -6.4 -4.27617 | overlap 3247238 CGCTCGCCGGGGCTA CGAAAGGG CCAG CCCTTTCC TTTTCGTCCGATCTC TERM 2108 3247288 - 3247309 + F 74 -9.3 -3.95584 | overlap 3247289 TGTATCGGGCGCGCT CCGCTCCCC AAAT GGGGGGCGA TTTCGTTCGTGGGAG TERM 2109 3247289 - 3247308 + F 71 -12.8 -2.97029 | overlap 3247288 GTATCGGGCGCGCTC CGCTCCCC AAAT GGGGGGCG ATTTCGTTCGTGGGA rplK 3247454 - 3247882 + | 50S ribosomal protein L11 rplA 3247889 - 3248581 + | 50S ribosomal protein L1 TERM 2110 3248603 - 3248641 + F 100 -20.4 -3.79251 | opp_overlap 3248605 3248609, overlap 3248605 AAGCATGAGCTAGAT TAGGAAGGGCGGGATCGT TCA ACGATCCCGCCCTTCGCA TTTCGTGGTACCATC TERM 2111 3248605 - 3248640 + F 100 -22.8 -2.87229 | gap 1, opp_overlap 3248605 3248609, overlap 3248603 GCATGAGCTAGATTA G-GAAGGGCGGGATCGT TCA ACGATCCCGCCCTTCGC ATTTCGTGGTACCAT TERM 2112 3248639 - 3248605 - f 100 -23 -2.65264 | opp_overlap 3248605 3248603, overlap 3248609 GCATGAGCTAGATTA GGAAGGGCGGGATCGT TCA ACGATCCCGCCCTTCG CATTTCGTGGTACCA TERM 2113 3248635 - 3248609 - f 100 -22.4 -3.25223 | opp_overlap 3248605 3248603, overlap 3248605 GAGCTAGATTAGGAA GGGCGGGATCGT TCA ACGATCCCGCCC TTCGCATTTCGTGGT BRADO3050 3248646 - 3249638 + | putative glyoxylate reductase (glycolate reductase) TERM 2114 3249736 - 3249726 - T 71 -8.2 -3.91716 | CGACCCGTTAAAGAA CCGG CTT CCGG GCGGGTCGGCTGTTG BRADO3051 3250054 - 3249707 - | hypothetical protein TERM 2115 3250281 - 3250224 - g 95 -4.8 -5.42259 | gap 3, overlap 3250226 3250227 3250228 3250239 CGAGCGGCAAAAAAA GAG-GCGGTCGAGCAACTGCACGAGGTCT TCA AGACCACGGGC-GTTGC-CGTCGTCGCTC ACTATTCCGGCCTTA TERM 2116 3250277 - 3250226 - g 72 -5.1 -4.35085 | gap 3, overlap 3250224 3250227 3250228 3250239 AGCGGCAAAAAAAGA GGCGGTCGAGCAACTGCACGAGGTCT TCA AGACCACGGGC-GTTGC-CGTC-GTC GCTCACTATTCCGGC rplJ 3250203 - 3250721 + | 50S ribosomal protein L10 rplL 3250782 - 3251159 + | 50S ribosomal protein L7/L12 TERM 2117 3251338 - 3251309 - f 79 -9.2 -4.17023 | opp_overlap 3251293, overlap 3251301 GGAATCATTGCAAAA GGCGTGCAACGG TTCAGT CCGTTGCGAGCC GAACACGGAAAAGTG TERM 2118 3251512 - 3251546 + F 100 -12.1 -4.44277 | gap 1, overlap 3251513 GTGACGAACTGGTTC TGACGAGCGGGTGCGC CCTC GCGC-CTCGCGCGTCG TTTTGCGTTTTGGTG TERM 2119 3251513 - 3251545 + F 77 -13.4 -3.25481 | gap 1, overlap 3251512 TGACGAACTGGTTCT GACGAGCGGGTGCGC CCTC GCGC-CTCGCGCGTC GTTTTGCGTTTTGGT rpoB 3251705 - 3255823 + | DNA-directed RNA polymerase subunit beta TERM 2120 3255861 - 3255837 - f 80 -14.9 -3.22091 | opp_overlap 3255828, overlap 3255838 AGTTCAAGCGATCAA GCCCGGCCGCC TCA AGCGGCCGGGT GCAGGCGCCTTCCTC TERM 2121 3255860 - 3255838 - f 86 -18.4 -2.52933 | opp_overlap 3255828, overlap 3255837 GTTCAAGCGATCAAG CCCGGCCGCC TCA AGCGGCCGGG TGCAGGCGCCTTCCT TERM 2122 3256905 - 3256891 - g 71 -12.8 -3.28712 | TGCGCTGTTCGACAA CGGCCG CCG CGGCCG CGTCATCACCGGCGC rpoC 3255959 - 3260158 + | DNA-directed RNA polymerase subunit beta' TERM 2123 3260207 - 3260162 - f 71 -12.5 -3.08679 | gap 1, opp_overlap 3260167 3260170, overlap 3260165 CCCGCGGAGTGAACA GAACGCTGCGGCAGCGCCTGAC GGT GTCCGGTGCTGCCGTC-CGTTC ATCGACCTTAGAAAA TERM 2124 3260177 - 3260165 - f 71 -9.1 -3.68988 | opp_overlap 3260167 3260170, overlap 3260162 GCGGAGTGAACAGAA CGCTG CGG CAGCG CCTGACGGTGTCCGG TERM 2125 3260167 - 3260204 + F 76 -14.1 -3.16742 | gap 1, opp_overlap 3260165 3260162, overlap 3260170 GGAGTGAACAGAACG CTG-CGGCAGCGCCTGAC GGT GTCCGGTGCTGCCGTCCG TTCATCGACCTTAGA TERM 2126 3260170 - 3260200 + F 87 -19 -2.56715 | opp_overlap 3260165 3260162, overlap 3260167 GTGAACAGAACGCTG CGGCAGCGCCTGAC GGT GTCCGGTGCTGCCG TCCGTTCATCGACCT TERM 2127 3260223 - 3260240 + F 100 -14.1 -5.40474 | opp_overlap 3260223 ATCGACCTTAGAAAA GGCCGGC ATTC GCCGGCC TTTTTTTGACAAGAT TERM 2128 3260240 - 3260223 - f 100 -14.1 -4.40358 | opp_overlap 3260223 ATCGACCTTAGAAAA GGCCGGC ATTC GCCGGCC TTTTTTTGACAAGAT BRADO3056 3260497 - 3262557 + | hypothetical protein BRADO3057 3262645 - 3265044 + | putative ABC-type multidrug transport system, ATPase and permease components BRADO3058 3266292 - 3265081 - | hypothetical protein BRADO3059 3267894 - 3266536 - | putative transposase TERM 2129 3267085 - 3267129 + g 79 -4.8 -4.73388 | overlap 3267097 CCGCGCCTGCGGATC GGTGGTGGAGGCCCGAGGCT CCTTC GGCTTCTTGCCGTTACCGCC TTTTTCCTCGAGCTT TERM 2130 3268057 - 3268077 + H 71 -8.1 -3.86897 | TGAGACGGTGGGCGC GCTGCCGCC TCC GGCGGCCAC TTTGTCCACCCTACG rpsL 3268676 - 3269047 + | 30S ribosomal protein S12 rpsG 3269091 - 3269561 + | 30S ribosomal protein S7 fusA 3269595 - 3271667 + | elongation factor G tufB 3271707 - 3272897 + | elongation factor Tu TERM 2131 3272965 - 3272907 - f 85 -15.3 -3.4758 | opp_overlap 3272921, overlap 3272903 3272904 GAGTAACAACACGAA TAGGGAATGGCGGGTGGCGAATGGTGA TCCAT TCGCCGTTCGCTACTCGCCACTCACTA CTCACAGAAAGATAC TERM 2132 3272921 - 3272944 + F 71 -13.2 -3.09516 | opp_overlap 3272903 3272904 3272907 ATAGGGAATGGCGGG TGGCGAATGG TGAT CCATTCGCCG TTCGCTACTCGCCAC rpsJ 3272985 - 3273293 + | 30S ribosomal protein S10 rplC 3273351 - 3274070 + | 50S ribosomal protein L3 rplD 3274071 - 3274691 + | 50S ribosomal protein L4 rplW 3274688 - 3274987 + | 50S ribosomal protein L23 rplB 3275000 - 3275833 + | 50S ribosomal protein L2 rpsS 3275846 - 3276124 + | 30S ribosomal protein S19 rplV 3276186 - 3276515 + | 50S ribosomal subunit protein L22 TERM 2133 3277244 - 3277214 - g 81 -14.7 -3.53091 | gap 1, overlap 3277197 AGGGCGGTGGCGAAA GCC-CGTCGCCGCG TTCG CGCCGCGACGCGGC CTGATCGATCAGCCG rpsC 3276538 - 3277248 + | 30S ribosomal protein S3 rplP 3277289 - 3277702 + | 50S ribosomal protein L16 rpmC 3277741 - 3277914 + | 50S ribosomal protein L29 rpsQ 3277925 - 3278173 + | 30S ribosomal protein S17 TERM 2134 3278178 - 3278166 - f 78 -4.7 -4.81212 | opp_overlap 3278177, overlap 3278167 3278168 GCGAGCACAAGAAAA CCGCC TGA GGCGC GTGACGCGGCCCGGA TERM 2135 3278247 - 3278229 - f 74 -5.9 -4.46212 | overlap 3278230 TTCGGGATCATAAAA GGCGCAG CTTTC CTGCGCA GTAGATGAAGAGGAC rplN 3278301 - 3278642 + | 50S ribosomal subunit protein L14 rplX 3278642 - 3278956 + | 50S ribosomal protein L24 rplE 3278949 - 3279506 + | 50S ribosomal protein L5 rpsN 3279600 - 3279860 + | 30S ribosomal protein S14 rpsH 3279873 - 3280271 + | 30S ribosomal protein S8 rplF 3280285 - 3280818 + | 50S ribosomal protein L6 rplR 3280830 - 3281192 + | 50S ribosomal protein L18 rpsE 3281229 - 3281813 + | 30S ribosomal protein S5 rpmD 3281859 - 3282050 + | 50S ribosomal protein L30 rplO 3282062 - 3282547 + | 50S ribosomal protein L15 TERM 2136 3282646 - 3282667 + F 83 -17.3 -2.66316 | overlap 3282643 CGACGTCCGCCCCAA GCCCCGCGA GCCC TCGCGGGGC TGATCTGGTCAAGAA secY 3282706 - 3284037 + | preprotein translocase subunit SecY TERM 2137 3284833 - 3284797 - g 71 -2.7 -4.58283 | overlap 3284785 3284799 TAAGGCGGCCAAAAA GGCGGCCAAGAGGGCGT CCA AGACCGCCGCGCCCGCC AAGAAAGCGGCCAAG TERM 2138 3284885 - 3284871 - g 72 -8.5 -4.09739 | CCAAGCCGGCTAAAA CCGCC AAGAA GGCGG CCAAGACCGTGAAAA TERM 2139 3284938 - 3284914 - g 78 -6.3 -4.62904 | AAAGACCGTGAAAAA GGCCGCGAAGA AGT CCTCCAAGGCC GCTGCCAAGGCGACC adk 3284126 - 3285007 + | adenylate kinase rpsM 3285203 - 3285571 + | 30S ribosomal protein S13 TERM 2140 3285587 - 3285629 + F 81 -13.5 -3.6715 | gap 1, opp_overlap 3285590 TTGGCGAATTGCGAA TGAGCGGGTAGCGGGTAGGG GAAG CCCTTCTCGCTATTCGC-CA TTTACCATTCGCTCG rpsK 3285700 - 3286089 + | 30S ribosomal protein S11 TERM 2141 3286099 - 3286117 + F 100 -12.4 -4.89562 | opp_overlap 3286099 GTCTGATCCGAAGGA GGCGGGCA GCA TGTCCGCC TTTTCTTGCTTTTGA rpoA 3286205 - 3287236 + | DNA-directed RNA polymerase subunit alpha TERM 2142 3287272 - 3287293 + F 78 -14.5 -3.09635 | GTCCGTAGGACCGGA CCCGGAATC TCGA GATTCCGGG TTCGATGCTGCGCAT rplQ 3287410 - 3287823 + | 50S ribosomal protein L17 TERM 2143 3287851 - 3287868 + F 100 -14.1 -4.56914 | opp_overlap 3287851 CCTGGGATTGCAAGA CGGCGCC TTCG GGCGCCG TTTTCATTTGGATGC TERM 2144 3287868 - 3287851 - f 75 -14.1 -3.05844 | opp_overlap 3287851 CCTGGGATTGCAAGA CGGCGCC TTCG GGCGCCG TTTTCATTTGGATGC BRADO3092 3288007 - 3288447 + | hypothetical protein TERM 2145 3288544 - 3288498 - f 81 -15.3 -3.09516 | gap 1, opp_overlap 3288502 GCCCGGATGAGCGAA GCGACATCCGGGATCATCGC CGCAACTC GTGA-GACCCCGGATGTCGC TTCCGCCTTAGCCTT TERM 2146 3288958 - 3288976 + G 77 -5.2 -4.62471 | overlap 3288960 CGTCAACAATGCCGG GATCTTCG AGC CGAAGGAC TTTTTCGAGATTCCC BRADO3093 3288659 - 3289480 + | putative short-chain dehydrogenase TERM 2147 3289504 - 3289560 + F 95 -21 -3.30124 | gap 2 GCGTAGCCCGCATGA GCGCAGCGACATGC-GGGTC-CACACGC ACA GCGCGTGAGACCCCGGATGTCGCTTCGC TTATCCGGGCTACGA BRADO3094 3289617 - 3289883 + | hypothetical protein BRADO3095 3289905 - 3291215 + | putative H(+)/Cl(-) exchange transporter BRADO3096 3291600 - 3292655 + | putative ABC transporter periplasmic substrate-binding protein TERM 2148 3292726 - 3292680 - f 91 -19.4 -3.09516 | opp_overlap 3292706 GCCCGGATGAGTGAA GCGACATCCGGGGTCTCACGAG GAG CGTGTGTGAACCCGGATGTCGC TCCGCTCATCCGGGC TERM 2149 3292813 - 3292765 - f 93 -8.8 -5.0916 | CTCTCAACACAAAAA GACC-TCATCCTGAGGAGCCCGCC GGA GGCGGGCGTCTC-GAAGGATGGCC GCGCATGACAATCAA BRADO3097 3292902 - 3293759 + | putative ABC transporter permease BRADO3098 3293759 - 3294547 + | ABC transporter ATP-binding protein (tauB-like) BRADO3099 3294563 - 3296101 + | putative amidohydrolase family protein BRADO3100 3296273 - 3296542 + | hypothetical protein TERM 2150 3296590 - 3296636 + T 100 -23.9 -3.09516 | gap 1, opp_overlap 3296569 3296568 GCCCGGATGAGCGCA GCGACATCCGGGCTCACAT-CG GCAA CGCGTGAGAGCCCGGATGTCGC TTCGCTCATCCGGGC BRADO3101 3297417 - 3296671 - | 3-oxoacyl-acyl carrier protein reductase TERM 2151 3297473 - 3297494 + r 80 -14.5 -3.13343 | opp_overlap 3297473, overlap 3297479 GTCCGAAGGACCAGA CCCGGAATC TCGA GATTCCGGG TTCGATGCTTCGCAT TERM 2152 3297494 - 3297473 - R 77 -14.5 -2.86164 | opp_overlap 3297473 3297479 GTCCGAAGGACCAGA CCCGGAATC TCGA GATTCCGGG TTCGATGCTTCGCAT BRADO3102 3298265 - 3297531 - | putative 3-oxoacyl-[acyl-carrier-protein] reductase TERM 2153 3298311 - 3298360 + r 100 -25.9 -3.09635 | opp_overlap 3298319 3298323, overlap 3298315 3298319 3298323 TTCGTCATTGCGAGC GCAGCGAAGCAATCCAGGGCTGC GTGT GCGGCTCTGGATTGCTTCGTCGC TTCGCTCGTCGCAAT TERM 2154 3298315 - 3298356 + r 100 -26.1 -2.55544 | opp_overlap 3298319 3298323, overlap 3298311 3298319 3298323 TCATTGCGAGCGCAG CGAAGCAATCCAGGGCTGC GTGT GCGGCTCTGGATTGCTTCG TCGCTTCGCTCGTCG TERM 2155 3298352 - 3298319 - R 81 -15.3 -3.06796 | opp_overlap 3298315 3298311 3298319 3298323, overlap 3298323 TGCGAGCGCAGCGAA GCAATCCAGGGCTGC GTGT GCGGCTCTGGATTGC TTCGTCGCTTCGCTC TERM 2156 3298319 - 3298352 + r 95 -19.7 -3.22388 | opp_overlap 3298319 3298323, overlap 3298315 3298311 3298323 TGCGAGCGCAGCGAA GCAATCCAGGGCTGC GTGT GCGGCTCTGGATTGC TTCGTCGCTTCGCTC TERM 2157 3298323 - 3298348 + r 76 -13.3 -3.41581 | opp_overlap 3298319 3298323, overlap 3298319 3298315 3298311 AGCGCAGCGAAGCAA TCCAGGGCTGC GTGT GCGGCTCTGGA TTGCTTCGTCGCTTC ilvD1 3300226 - 3298403 - | dihydroxy-acid dehydratase TERM 2158 3300400 - 3300413 + r 77 -2.4 -4.99043 | CTAGATCACCGATTT TGGT TGCGCT ACCA TTTTGTTTCTGGGGC BRADO3104 3301479 - 3300385 - | LacI family transcriptional regulator BRADO3105 3301752 - 3302789 + | ABC transporter ATP-binding protein TERM 2159 3302798 - 3302773 - f 70 -13.3 -2.96274 | TGTTCGACAAGGATA GCGGCCGGA GACTTTGA TCCGGCCGC GCGGCGCGGACTGAC TERM 2160 3302848 - 3302833 - f 82 -6 -4.91873 | overlap 3302834 CAGACCAATTAAAAA GGCCGG AAAA CCGGCA AAAAACAAACAAGCA TERM 2161 3303505 - 3303478 - g 70 -9.8 -3.73534 | overlap 3303481 3303482 CAAGGCGATGAACAA GAACGGCACGCC CGGC GGCATGGCGCTC GGCCACGCCTCGGGC TERM 2162 3303527 - 3303481 - g 84 -13 -3.99374 | overlap 3303478 3303482 GGCGATGAACAAGAA CGGCA-CGCCCGGCGGCATGGC GCTCG GCCACGCCTC-GGGCGACGCCA ATGGCTGGGTGCACT TERM 2163 3303526 - 3303482 - g 72 -14.3 -2.99142 | overlap 3303478 3303481 GCGATGAACAAGAAC GGCA-CGCCCGGCGGCATGGC GCTCG GCCACGCCTC-GGGCGACGCC AATGGCTGGGTGCAC BRADO3106 3302888 - 3304210 + | putative ABC transporter periplasmic-binding protein TERM 2164 3304364 - 3304308 - f 100 -26 -3.09516 | gap 1, opp_overlap 3304318 TGTCGCACCACCGAA TGGTGGGC-ACGGCCCTCGACGCGATG CACG CATCGCGTCGAGGTCCTTTGCCCACCC TACGGCTTACTCACG TERM 2165 3304318 - 3304353 + F 100 -23.4 -3.53811 | opp_overlap 3304308 CCGAATGGTGGGCAC GGCCCTCGACGCGATG CACG CATCGCGTCGAGGTCC TTTGCCCACCCTACG BRADO3107 3304618 - 3305505 + | putative ABC transporter permease protein BRADO3108 3305520 - 3306437 + | putative ABC transporter permease protein TERM 2166 3306522 - 3306534 + F 74 -10.5 -3.73775 | opp_overlap 3306477 3306507 TGCTGCGGTGGGCAC GGCGC TAC GCGCC TTTGCTCACCCTACA BRADO3109 3306568 - 3307551 + | putative UDP-glucose 4-epimerase BRADO3110 3307594 - 3308796 + | acetyl-CoA acetyltransferase TERM 2167 3308830 - 3308870 + T 80 -14.8 -3.17723 | gap 1, opp_overlap 3308796 3308833 3308838, overlap 3308834 3308838 TCATTGCGAGCGAAG CGACGCAATCCAGGGCCGC ACGT GCCGCCCTGGATTG-GTGG TTGCATTGAGGGTCG TERM 2168 3308867 - 3308833 - T 77 -15.1 -2.54896 | gap 1, opp_overlap 3308830 3308834 3308838, overlap 3308796 3308838 TTGCGAGCGAAGCGA CGCAATCCAGGGCCGC ACGT GCCGCCCTGGATTG-G TGGTTGCATTGAGGG TERM 2169 3308834 - 3308867 + T 78 -15.3 -2.78712 | opp_overlap 3308796 3308833 3308838, overlap 3308830 3308838 TGCGAGCGAAGCGAC GCAATCCAGGGCCGC ACGT GCCGCCCTGGATTGG TGGTTGCATTGAGGG TERM 2170 3308838 - 3308863 + T 82 -14.7 -3.28984 | opp_overlap 3308833 3308838, overlap 3308834 3308830 AGCGAAGCGACGCAA TCCAGGGCCGC ACGT GCCGCCCTGGA TTGGTGGTTGCATTG TERM 2171 3308863 - 3308838 - T 78 -14.7 -3.10112 | opp_overlap 3308838 3308834 3308830, overlap 3308833 AGCGAAGCGACGCAA TCCAGGGCCGC ACGT GCCGCCCTGGA TTGGTGGTTGCATTG BRADO3111 3310239 - 3309010 - | putative ATP-dependent protease La TERM 2172 3309054 - 3309107 + g 74 -12.3 -3.53012 | gap 1 CCACCGCCTTGGCGG CCCGCACCATGGTCACGC-CGTGCTC GGC GAGCAGGCGTGCGGCCGGGCTGCGGG TTTCCGGGAACAGCG TERM 2173 3309655 - 3309698 + g 73 -15.2 -2.81642 | gap 1 GGCGTAGCGCTCGAA GCGCGTGACGGCGCGCAGGAT GAG ATCCGGCGCATCGGC-CGCGC TGTCCTCGCTGATGT BRADO3112 3310456 - 3311055 + | putative acetyltransferase BRADO3113 3311679 - 3311185 - | hypothetical protein BRADO3116 3312597 - 3313715 + | putative catalase BRADO3117 3316768 - 3313721 - | putative transcriptional regulatory protein TERM 2174 3316696 - 3316718 + g 75 -7 -4.30576 | gap 1, opp_overlap 3316671 3316670 CGAGCAGGATGCGCT CGCCGCTGC GCCGAA GCAG-GGCG TTTTGCTGATCGAGC BRADO3121 3317328 - 3317642 + | putative signal peptide TERM 2175 3317933 - 3317959 + G 72 -11.5 -3.58522 | overlap 3317951 GTTCGGCGGACACGG GCCGGTGCTGC TGGTT GCGGCGCTGGC TTTCGGCGTCCTCGT BRADO3122 3317865 - 3318875 + | hypothetical protein BRADO3123 3320056 - 3319631 - | putative glutathione-dependent formaldehyde-activating, GFA BRADO3125 3320516 - 3321721 + | putative Formyl-CoA transferase TERM 2176 3322258 - 3322225 - g 81 -3.7 -5.00884 | gap 1 AGGTCGCCGAAAAAA TCCTGCTGCTGGCGCG CAC CACGCC-GCTCGAGGA GGTGAAGCGCCCGAC BRADO3126 3321726 - 3322892 + | putative acyl-CoA dehydrogenase BRADO3127 3323460 - 3324596 + | putative thiolase BRADO3128 3324593 - 3324949 + | hypothetical protein BRADO3129 3325280 - 3325179 - | hypothetical protein BRADO3130 3327466 - 3325604 - | putative glutaminase TERM 2177 3326256 - 3326228 - G 74 -12.4 -3.54424 | gap 1 TGCGAGCTCGTGAAA CAGCTCGGCCAGC AGAC GCAGGCCG-GCTG GCGTCATCGCGGTGA BRADO3131 3327841 - 3328824 + | IclR family transcriptional regulator TERM 2178 3329338 - 3329372 + GT 72 -12.1 -3.29144 | gap 1 CTACTCGGTCATGAC CCGGCAG-TCGGCGAT GTTC GTCGCCGGTCCGCCGG TTGTGAAGCGGCTCG TERM 2179 3330269 - 3330213 - gT 80 -16.6 -2.66316 | opp_overlap 3330216 3330228, overlap 3330228 GGGTCGAGGAGATCA TCGACCCGCGCAAGACGCGCGCGCT-GC TCT GCGAGTTCGCGCGTCTTGC-CGAGCCGT TGCGGACGCCGGGAC BRADO3132 3328754 - 3330313 + | putative methylmalonyl-CoA decarboxylase alpha chain BRADO3133 3331603 - 3330320 - | MFS family transporter TERM 2180 3331547 - 3331529 - G 73 -11 -3.63073 | overlap 3331518 GAGAGCCGCGAAGAA GGTCACGG CGA CCATGACC CAGCCGTAGTGGATG atoB 3332876 - 3331689 - | acetyl-CoA acetyltransferase BRADO3135 3333788 - 3333018 - | enoyl-CoA hydratase BRADO3136 3333937 - 3334593 + | TetR family transcriptional regulator TERM 2181 3334584 - 3334572 - f 70 -10.5 -3.61398 | GCGGCCGGTGAAGAA GGCGG CCG CCGCC AAGCGCTGAGTCCTG BRADO3137 3334747 - 3336243 + | methylmalonate-semialdehyde dehydrogenase TERM 2182 3336284 - 3336326 + F 88 -17.3 -3.09635 | gap 2, opp_overlap 3336289 3336294 3336298, overlap 3336290 3336294 3336298 GTCTCGTCATTGCGA GCGAAGCGAAGCAATCCAGGG TGA CTCTGGATTGCTTCG-T-CGC TTCGCTCCTCGCAAT TERM 2183 3336323 - 3336289 - f 81 -15.8 -3.06183 | opp_overlap 3336284 3336290 3336294 3336298, overlap 3336294 3336298 GTCATTGCGAGCGAA GCGAAGCAATCCAGGG TGA CTCTGGATTGCTTCGT CGCTTCGCTCCTCGC TERM 2184 3336290 - 3336322 + F 100 -21.5 -2.55544 | opp_overlap 3336289 3336294 3336298, overlap 3336284 3336294 3336298 TCATTGCGAGCGAAG CGAAGCAATCCAGGG TGA CTCTGGATTGCTTCG TCGCTTCGCTCCTCG TERM 2185 3336318 - 3336294 - f 73 -12.9 -3.19192 | opp_overlap 3336290 3336284 3336294 3336298, overlap 3336289 3336298 TGCGAGCGAAGCGAA GCAATCCAGGG TGA CTCTGGATTGC TTCGTCGCTTCGCTC TERM 2186 3336294 - 3336318 + F 83 -15.1 -3.22388 | opp_overlap 3336294 3336289 3336298, overlap 3336290 3336284 3336298 TGCGAGCGAAGCGAA GCAATCCAGGG TGA CTCTGGATTGC TTCGTCGCTTCGCTC TERM 2187 3336393 - 3336382 - f 75 -3.6 -4.93547 | overlap 3336390 GCAACCAACTAAAAA CACG GAAA CGCG GAGAACGAATGCAGT TERM 2188 3336434 - 3336455 + G 70 -10.8 -3.53012 | opp_overlap 3336430 TGAGGATCAGATCGC GGTGCGCG ACATGG CGCGCGCC TTTGCGGCCGAGAAG TERM 2189 3337167 - 3337132 - g 72 -13.9 -3.01712 | GCGGCCGTCTCAACA TCGCGGCCTGCTCGC TGGGCG GCGCGCAGGCCGCAC TCGACAAGACCTTGG BRADO3138 3336402 - 3337547 + | acyl-CoA dehydrogenase BRADO3139 3337568 - 3338620 + | enoyl-CoA hydratase TERM 2190 3339463 - 3339490 + G 90 -15.6 -3.87075 | opp_overlap 3339458 AAATCTACAAGGCGT TCGACGCCGCCG GCCA TGGTGGCGTCGA TTTCTCAGGCATCAT BRADO3140 3338649 - 3339539 + | putative 3-hydroxyisobutyrate dehydrogenase BRADO3141 3339539 - 3341266 + | putative acetyl-CoA synthetase BRADO3142 3341274 - 3341750 + | nodN-like protein TERM 2191 3342097 - 3342062 - g 77 -13.2 -3.59738 | gap 1 GAGGAGATCCGCAAA GCCGGCGGCACCG-CGA TGG CCGACGGTGCCGACGTC TCGAACTTCGAGCAG BRADO3143 3341876 - 3342793 + | putative 3-oxo-(acyl) acyl carrier protein reductase BRADO3144 3342989 - 3344215 + | putative signal peptide TERM 2192 3344278 - 3344226 - T 75 -12 -3.53811 | gap 1, opp_overlap 3344262 3344272 3344276, overlap 3344262 CGTAGGGTGGGCAAA GCGCAGCGTGCACACCATCAGCGTC AACC GAGACC-ACGGTGGGCACGATGCGC CGCGGCTTTGCCGCG TERM 2193 3344272 - 3344300 + T 75 -12.3 -3.53811 | opp_overlap 3344226 3344262, overlap 3344262 3344276 GACCACGGTGGGCAC GATGCGCCGCGGC TTT GCCGCGTCGTCTC TTTGCCCACCCTACA TERM 2194 3344276 - 3344296 + T 76 -13.9 -3.24232 | opp_overlap 3344226 3344262, overlap 3344262 3344272 ACGGTGGGCACGATG CGCCGCGGC TTT GCCGCGTCG TCTCTTTGCCCACCC BRADO3145 3345501 - 3344422 - | putative amino acid processing enzyme-related protein (aldolase or racemase) TERM 2195 3345537 - 3345580 + r 78 -14.6 -3.06183 | opp_overlap 3345542, overlap 3345542 GTCATTGCGAGCGGA GCGAAGCAATCCAGAGTCCC GACT GCAGCCCTGGATTGCTTCGC TTCGCTCGCAATGAC TERM 2196 3345611 - 3345638 + r 74 -6.2 -4.51812 | gap 1, opp_overlap 3345611 3345607 3345627, overlap 3345612 GAAAGAGAGAACGTA GGGTGGGCAAAGC GAA GCGT-GCCCACCA TTTGTTGTTGTGCAA BRADO3146 3347511 - 3345703 - | ABC transporter ATPase TERM 2197 3346942 - 3346913 - G 81 -10.8 -4.11484 | gap 1, opp_overlap 3346898 3346900 3346915, overlap 3346914 TCGAACGCCGCAAAA CCGCGGTC-GATC TGCTT GATCTGACCGCGA TCGAGCCAGGCGGTC BRADO3147 3348013 - 3347519 - | hypothetical protein BRADO3148 3348138 - 3348941 + | hypothetical protein TERM 2198 3349010 - 3348982 - T 71 -9.6 -3.81488 | gap 1 CCGCTCCAAACACAA CTGTCATGCCCGC GCAG GCGGGCATC-CAG TACGCCGCGGCGTCT BRADO3149 3351715 - 3349340 - | putative carbon-monoxide dehydrogenase large subunit TERM 2199 3351958 - 3351927 - H 81 -16.6 -2.81815 | gap 1, opp_overlap 3351954, overlap 3351924 3351929 TTGAATGATCAATGA CACGCGGCTGCGGGA GAG TCCCAC-GCCGCGCG GGAACCTGGAGCCCG TERM 2200 3351956 - 3351929 - H 79 -15.6 -2.95409 | gap 1, opp_overlap 3351954, overlap 3351927 3351924 GAATGATCAATGACA CGCGGCTGCGGGA GAG TCCCAC-GCCGCG CGGGAACCTGGAGCC BRADO3150 3352030 - 3352989 + | putative exopolyphosphatase TERM 2201 3353042 - 3353032 - f 73 -6.8 -4.25104 | opp_overlap 3353032 CGGGCCGGACGAAAA CAGC GAA GCTG TTTGCGTCTGGCGCG TERM 2202 3353088 - 3353120 + F 76 -15.6 -2.52896 | gap 1 TCCGTAACCTCTGGA TTCCGGGTCCCGCCC TGAC GGGCGGT-CCCGGAA TGGCTTCCGAGATCA ftsJ 3353138 - 3353833 + | ribosomal RNA large subunit (23S) methyltransferase BRADO3152 3353977 - 3354219 + | hypothetical protein TERM 2203 3354630 - 3354677 + G 70 -9.9 -3.69256 | gap 3, opp_overlap 3354599, overlap 3354617 3354644 CGTGCTGGACCCGCA CG-CCGGTCGGCATGGTCTGGACC TGC GG-CTAGGCC-TGCGGGCCGGACG TTCTCTTCACTGAGT BRADO3153 3354329 - 3354661 + | putative signal peptide BRADO3154 3354896 - 3355822 + | hypothetical protein BRADO3155 3355819 - 3356307 + | hypothetical protein TERM 2204 3356651 - 3356603 - g 91 -17.3 -3.65046 | opp_overlap 3356613 3356624 GCTGGAGGGCAACAA GATGGCCAAGGCCGGCCGCGGCG GCC CGGCGCTGGCGACCTCGGCGATC GGCTCGTTCGTCGCT BRADO3156 3356337 - 3357806 + | hypothetical protein BRADO3157 3357860 - 3359077 + | putative signal peptide BRADO3158 3359722 - 3359189 - | hypothetical protein TERM 2205 3359465 - 3359420 - G 82 -12.5 -4.00782 | overlap 3359432 TGAGATGAGCACAAA GGTGGAGAGGAAGATCGCCTC GACG GAGGCGATCATCGCCAGCACC ACGAAGCTCTCGTCC TERM 2206 3359453 - 3359432 - G 78 -14.5 -3.27215 | overlap 3359420 AAAGGTGGAGAGGAA GATCGCCTC GACG GAGGCGATC ATCGCCAGCACCACG TERM 2207 3359871 - 3359884 + H 75 -3.8 -4.74103 | overlap 3359851 GTTGCGCTTGGCAAG CAGC AATCTC GCTG TTTTTCGATTGCAGA TERM 2208 3360118 - 3360090 - g 95 -14.5 -4.26903 | overlap 3360073 GTTACGCGACGAAAA CGGCAGGCTGCGC TCG GCGCAGGATGCCG AGGCTGTGCGATCCG TERM 2209 3360329 - 3360365 + G 100 -7.9 -5.40072 | CCATCTGGAGCGGGG GCGATCGGTTTGTCC AGGATGC GGGCACGCCGCTCGC TTTTTTTCCCAACAC BRADO3159 3359899 - 3361194 + | putative signal peptide BRADO3160 3363477 - 3361255 - | putative oxidoreductase subunit protein BRADO3161 3363962 - 3363474 - | putative oxidoreductase subunit protein BRADO3162 3365371 - 3363962 - | putative alcohol dehydrogenase cytochrome c subunit protein BRADO3163 3367111 - 3365624 - | putative multidrug efflux protein TERM 2210 3367453 - 3367501 + G 73 -12.9 -3.28924 | overlap 3367454 CGAGGTGGTCGACGC TATCCGCCGCTATGGCCCGCCGC CGG GCGCCTGGCGCTAGCGGCGGAAC TTCTGCCCCGGAATC TERM 2211 3367454 - 3367500 + G 77 -16.4 -2.57211 | overlap 3367453 GAGGTGGTCGACGCT ATCCGCCGCTATGGCCCGCCGC CGG GCGCCTGGCGCTAGCGGCGGAA CTTCTGCCCCGGAAT BRADO3164 3367244 - 3367492 + | putative signal peptide TERM 2212 3367506 - 3367521 + F 75 -11.8 -3.57309 | AGCGGCGGAACTTCT GCCCCG GAAT CGGGGC TTTCGCGACCTTTTG TERM 2213 3367548 - 3367598 + F 100 -21.4 -3.95584 | gap 3 TTTGTTGCGCATCGG GGGCCGATCCAGGCCGTCCT-TCGC AATC GCGGGAGGACGGCC-G-ATCGGCCC TTTGATTCGTCACAG TERM 2214 3368329 - 3368307 - g 70 -6.2 -4.1899 | overlap 3368308 GCACCGCATCGAAAA GCTGCTCGTC GTC GACGATCAGT ACCGCTGCGTGGGCC TERM 2215 3369191 - 3369173 - g 70 -11 -3.53012 | CGGGCTTGCGCGAAA GCCACGTC CAC GACGTGAC CATCACCCGCGAGAG guaB 3367744 - 3369231 + | inositol-5-monophosphate dehydrogenase TERM 2216 3369357 - 3369409 + F 88 -17.3 -3.09635 | gap 3, opp_overlap 3369362 3369367 3369371, overlap 3369363 3369367 3369371 TCTCCGTCATTGCGA GCGAAGCGAAGCAATCCAGGGGCGGC GCGC GCAGCCC-TGGATTGCTTCG-T-CGC TTCGCTCCTCGCAAT TERM 2217 3369406 - 3369362 - f 90 -18 -3.06183 | gap 1, opp_overlap 3369357 3369363 3369367 3369371, overlap 3369367 3369371 GTCATTGCGAGCGAA GCGAAGCAATCCAGGGGCGGC GCGC GCAGCCC-TGGATTGCTTCGT CGCTTCGCTCCTCGC TERM 2218 3369363 - 3369405 + F 100 -21.5 -2.55544 | gap 1, opp_overlap 3369362 3369367 3369371, overlap 3369357 3369367 3369371 TCATTGCGAGCGAAG CGAAGCAATCCAGGGGCGGC GCGC GCAGCCC-TGGATTGCTTCG TCGCTTCGCTCCTCG TERM 2219 3369401 - 3369367 - f 83 -15.1 -3.19192 | gap 1, opp_overlap 3369363 3369357 3369367 3369371, overlap 3369362 3369371 TGCGAGCGAAGCGAA GCAATCCAGGGGCGGC GCGC GCAGCCC-TGGATTGC TTCGTCGCTTCGCTC TERM 2220 3369367 - 3369401 + F 83 -15.1 -3.22388 | gap 1, opp_overlap 3369367 3369362 3369371, overlap 3369363 3369357 3369371 TGCGAGCGAAGCGAA GCAATCCAGGGGCGGC GCGC GCAGCCC-TGGATTGC TTCGTCGCTTCGCTC BRADO3166 3369479 - 3370501 + | putative NADP-dependent oxidoreductase BRADO3167 3370641 - 3370973 + | hypothetical protein BRADO3168 3370989 - 3372287 + | putative SUN-family protein, RNA methyltransferase TERM 2221 3372389 - 3372356 - f 75 -13.9 -3.06796 | opp_overlap 3372356 3372360, overlap 3372360 TGCGAGCGCAGCGAA GCAATCCAGAGTCCC ACCC GAGCCCCTGGATTGC TTCGCTGCGCTCGCA TERM 2222 3372705 - 3372648 - f 100 -13.4 -4.49377 | gap 3, opp_overlap 3372670, overlap 3372649 GGGATAACAAAACAA GTGTCGTCCCGGG-CAA-GCCCCGCGCGC GCA GCGCGTGGGGCGCCGACCCGGGACC-CAT ACTCCGCGGCCGTTA TERM 2223 3372704 - 3372649 - f 91 -16.9 -3.28542 | gap 3, opp_overlap 3372670, overlap 3372648 GGATAACAAAACAAG TGTCGTCCCGGG-CAA-GCCCCGCGCGC GCA GCGCGTGGGGCGCCGACCCGGGACC-CA TACTCCGCGGCCGTT TERM 2224 3373037 - 3373068 + F 70 -13.1 -2.87132 | gap 1, overlap 3373038 CGCGGATGGGCCGTA CA-TGCCCTCTCCC ACAAG GGGAGAGGGCGCTG TATCTGGCAGCCGCA guaA 3373161 - 3374768 + | bifunctional GMP synthase/glutamine amidotransferase protein BRADO3170 3375140 - 3375361 + | hypothetical protein TERM 2225 3375376 - 3375406 + F 100 -12.6 -4.55689 | gap 1 ACAAAGTCGTAGATG GAGCCGCCC-GCT CATCAC GGCTGGGCGGCTC TTTTCTGTAACTGAT BRADO3171 3376313 - 3377521 + | hypothetical protein TERM 2226 3377591 - 3377550 - T 85 -14.5 -3.5394 | opp_overlap 3377584 3377585 AAATCTTCCTTTAAA TTTCACAACTGGCTCGGCA GGAT TGCTGAGCCAGTTGGGAGA GCCCAGTTTGCGAGA BRADO3172 3379427 - 3378369 - | YeeE/YedE family membrane protein BRADO3173 3379947 - 3379597 - | Ars family transcriptional regulator BRADO3174 3380361 - 3379972 - | putative thioredoxin; putative SoxS protein BRADO3175 3380483 - 3381217 + | putative transmembrane cytochrome C biogenesis protein, putative SoxV protein BRADO3176 3381934 - 3381218 - | putative signal peptide BRADO3178 3382057 - 3382605 + | putative thioredoxin-like protein; SoxW precursor BRADO3179 3382770 - 3383177 + | putative monoheme cytochrome c sulfur oxidizing protein(SoxX) BRADO3180 3383198 - 3383650 + | sulfur oxidation protein SoxY BRADO3181 3383669 - 3383995 + | putative sulfur oxidation protein (soxZ) BRADO3182 3384030 - 3384854 + | putative sulfur oxidation protein (SoxA); cytochrome c precursor BRADO3183 3384908 - 3386554 + | putative sulfur/thiosulfate oxidation protein (SoxB) TERM 2227 3386730 - 3386691 - gf 72 -13.5 -2.71681 | overlap 3386714 CAATCCTGCCAATCA GCCGCCGAACGTGCCGG AATGGA CCCGCACGCTCGGCGAG GGCGTCGCGGTTCGC BRADO3184 3386560 - 3387843 + | putative sulfite oxidase (soxC) BRADO3185 3387782 - 3388561 + | putative sulfite oxidase cytochrome subunit (SoxD) BRADO3186 3388588 - 3389022 + | putative signal peptide BRADO3187 3389034 - 3389942 + | putative signal peptide BRADO3188 3389996 - 3390385 + | hypothetical protein TERM 2228 3390520 - 3390554 + G 70 -11.4 -3.35679 | gap 1, overlap 3390500 GCGGGCTCGCGGTCG GCGGC-GCGTTCGGC TTCTTC GCCCAGCGCAGCCGC TTCTGCCTGCGGGCG BRADO3189 3390453 - 3391553 + | hypothetical protein BRADO3190 3391647 - 3392189 + | hypothetical protein TERM 2229 3392683 - 3392707 + G 72 -8.5 -4.03888 | overlap 3392679 TGGCGTCTGGTTCGC CGCGCTGGC CATCGGC GCTGGCGCG TTCTTCTTCTGGGTC BRADO3191 3392204 - 3392761 + | hypothetical protein BRADO3192 3392810 - 3393151 + | putative sulfurtransferase (rhodanese) BRADO3193 3393842 - 3393207 - | putative disulfide bond formation protein D precursor (disulfide oxidoreductase D) BRADO3194 3395938 - 3393842 - | putative suppressor for copper-sensitivity B; putative protein-disulfide reductase TERM 2230 3395312 - 3395350 + g 77 -10.8 -3.76839 | opp_overlap 3395297 GACGTCGGGCGCGCG CAGCGGCGGCGTCGCCAG GGC CTCGAGACGCAGCTGCGG TTTGGGTTGGCGTTC BRADO3195 3396500 - 3396105 - | hypothetical protein BRADO3196 3397478 - 3396591 - | metallo-hydrolase/oxidoreductase domain-containing protein TERM 2231 3397496 - 3397530 + r 74 -13.4 -2.96274 | opp_overlap 3397499, overlap 3397492 3397499 CTGCTGCTCCACGAT GAAGCTCCGGGGCGGC ATC GCCGCCCCGTGCCCTC TGTCATTCTGCCGGG TERM 2232 3397526 - 3397499 - R 80 -14.8 -3.21099 | gap 1, opp_overlap 3397499 3397496 3397492 CTGCTCCACGATGAA GCTCCGGGGCGGC ATC GCCGCCCC-GTGC CCTCTGTCATTCTGC BRADO3197 3397750 - 3397547 - | hypothetical protein BRADO3198 3398509 - 3397841 - | CRP/FNR family transcriptional regulator BRADO3199 3398978 - 3398622 - | putative carboxymuconolactone decarboxylase BRADO3200 3402182 - 3398985 - | AcrB/AcrD/AcrF family cation mulitdrug efflux protein BRADO3201 3403213 - 3402203 - | RND family efflux pump membrane fusion protein TERM 2233 3402610 - 3402584 - G 90 -15.8 -3.85698 | overlap 3402586 GCCGGCCTTGAGAAA CAGCGCATGCCG CTC CGGCACGCGCAG CCGCAGCTTGAAGTT TERM 2234 3402608 - 3402586 - G 89 -17 -3.51934 | overlap 3402584 CGGCCTTGAGAAACA GCGCATGCCG CTC CGGCACGCGC AGCCGCAGCTTGAAG BRADO3202 3403625 - 3403323 - | Ars family transcriptional regulator BRADO3203 3403738 - 3405036 + | sulfide-quinone reductase TERM 2235 3405266 - 3405306 + G 71 -12.6 -3.31263 | overlap 3405269 GGCAATGGCGCCGAT GTTCGCGCGCGCCGC-CGAG GCG CTCGAGCCGCGCGTGC-AGC TTCTGAAGCTGAACT BRADO3204 3405033 - 3405473 + | putative thioredoxin BRADO3205 3405511 - 3405729 + | hypothetical protein fixG 3405775 - 3407220 + | nitrogen fixation protein FixG TERM 2236 3407278 - 3407317 + F 100 -22.4 -2.89421 | opp_overlap 3407285, overlap 3407280 3407285 TAGTTTGTAGCTGAT GAAAAAAGAGGGAGGAGC ATCC GCTCCTCCCTCTTTTGTC TGTCGTGCTTGTTCC TERM 2237 3407280 - 3407315 + F 91 -19.2 -2.9913 | opp_overlap 3407285, overlap 3407278 3407285 GTTTGTAGCTGATGA AAAAAGAGGGAGGAGC ATCC GCTCCTCCCTCTTTTG TCTGTCGTGCTTGTT TERM 2238 3407310 - 3407285 - f 100 -19.1 -5.15634 | opp_overlap 3407280 3407278 3407285 TAGCTGATGAAAAAA GAGGGAGGAGC ATCC GCTCCTCCCTC TTTTGTCTGTCGTGC TERM 2239 3407285 - 3407310 + F 100 -19.1 -4.62984 | opp_overlap 3407285, overlap 3407280 3407278 TAGCTGATGAAAAAA GAGGGAGGAGC ATCC GCTCCTCCCTC TTTTGTCTGTCGTGC BRADO3207 3407386 - 3407622 + | hypothetical protein TERM 2240 3408164 - 3408135 - f 81 -4.1 -4.99568 | gap 1, overlap 3408123 3408136 CAAGACCAAAGAAAA TCGTCGGTCTCGCC ATC GGCGTG-CCGATGT GGCATGTCGGTAAAA BRADO3209 3408168 - 3408398 + | hypothetical protein BRADO3210 3408889 - 3408620 - | hypothetical protein BRADO3211 3409450 - 3409773 + | hypothetical protein BRADO3212 3409783 - 3411282 + | hypothetical protein TERM 2241 3412399 - 3412341 - g 81 -16.7 -3.12327 | gap 2, overlap 3412326 3412396 TCGTCAGAGCCAAGA CGATCATCGATGCCTGGGCCGCGGACCCG GCC CGGAGCCGCG-CCCAGGCAGCAAAG-CCG TGACGGCCAGGGCGG BRADO3213 3411293 - 3412402 + | putative AAA ATPase TERM 2242 3412552 - 3412516 - g 76 -14.5 -3.14132 | gap 2 GCCGTGCTCGACGAA CTCG-GCCG-GCGCGGC ACCAA GCCGCGCACGGCTCAAG AAGCGACGCGATGGC TERM 2243 3412576 - 3412555 - g 80 -13.7 -3.62597 | opp_overlap 3412555 CGCACGGCTCAAGAA GCGACGCGA TGGC TCGCGCCGC TGGTGTGCACGAACG TERM 2244 3413034 - 3413016 - g 70 -6 -4.25104 | CGCGCCGGACGAAAA GGCAAG ACATTCG CTTGCC GAGTCGTCGGCCGAC TERM 2245 3414215 - 3414249 + G 77 -10.7 -3.85698 | gap 1, overlap 3414216 ACATCGACCTGCGCG CCCCGGACGTA-CTGC GCCG GCTGCTACGTCCGGGC TTTCTCGACCCAGAA TERM 2246 3414216 - 3414248 + G 71 -14.2 -2.91276 | gap 1, overlap 3414215 CATCGACCTGCGCGC CCCGGACGTA-CTGC GCCG GCTGCTACGTCCGGG CTTTCTCGACCCAGA BRADO3214 3412435 - 3416598 + | hypothetical protein TERM 2247 3417094 - 3417122 + G 100 -10.9 -4.67982 | GCCGCCGGAGCAATG GCTCGTTACGCCG ATC CGGCTTGCCGAGC TTTTCTTCGATACGG TERM 2248 3417416 - 3417469 + G 74 -12.4 -3.61178 | gap 3 TTTGCCGACGCTGTG CTGCACGAGGCGCCCGAGGGCGTGTGG ACG CCGCTCGGCC--GGCCGCCTCG-GCAG TTTCCGCTGGCTCCG BRADO3215 3416648 - 3417622 + | hypothetical protein BRADO3216 3417619 - 3417933 + | hypothetical protein TERM 2249 3418797 - 3418785 - g 81 -4.1 -5.05079 | AGAACGATATAAAAA CAGAC CTG ATCTG CTGGGAGCACGCGCT BRADO3217 3418360 - 3419073 + | hypothetical protein BRADO3218 3419618 - 3419824 + | hypothetical protein BRADO3220 3421084 - 3419960 - | putative Phage integrase TERM 2250 3421263 - 3421237 - R 74 -2.2 -4.84363 | CCAAACTACGAAAAA CCACGATCTG ACAAGCG CTTATCGTGG GCTTCGGTGATGGTC BRADO3221 3421750 - 3421484 - | putative signal peptide BRADO3222 3421959 - 3422402 + | putative signal peptide TERM 2251 3422573 - 3422515 - T 100 -19.1 -4.16842 | gap 1, opp_overlap 3422524 3422527, overlap 3422519 GCCATTCCGAACAAA CGCACGAAACAATCCAGCGCCAGATCGT CCCC ATGACCGGGCACTGGATTGTTTCGC-CG AGACCCTCGGGACAG TERM 2252 3422570 - 3422519 - T 100 -21.8 -2.75825 | opp_overlap 3422524 3422527, overlap 3422515 TTCCGAACAAACGCA CGAAACAATCCAGCGCCAGATCGT CCCC ATGACCGGGCACTGGATTGTTTCG CCGAGACCCTCGGGA TERM 2253 3422524 - 3422565 + T 74 -12.3 -3.53091 | opp_overlap 3422519 3422515, overlap 3422527 AACAAACGCACGAAA CAATCCAGCGCCAGATCGT CCCC ATGACCGGGCACTGGATTG TTTCGCCGAGACCCT TERM 2254 3422527 - 3422562 + T 71 -8.2 -3.90744 | opp_overlap 3422519 3422515, overlap 3422524 AAACGCACGAAACAA TCCAGCGCCAGATCGT CCCC ATGACCGGGCACTGGA TTGTTTCGCCGAGAC TERM 2255 3422612 - 3422644 + T 70 -9.9 -3.62522 | overlap 3422612 CCCGCCGTCGGTCTC GACCAAGCAGGTTAG CGC TTGGCCTTCTTGGTC TTCTTGGCCGCCTTC BRADO3223 3422904 - 3422623 - | histone-like DNA-binding protein BRADO3224 3424222 - 3422975 - | deoxyribodipyrimidine photo-lyase BRADO3225 3424507 - 3426249 + | putative methyl-accepting chemotaxis protein BRADO3226 3427814 - 3426510 - | putative TRAP-type C4-dicarboxylate transport system, large permease component TERM 2256 3427044 - 3427032 - G 76 -6.2 -4.56597 | overlap 3427033 3427034 GGCTCCCTGGAAAAA GGCG ACCAG CGCC GCGCCGAGCACGCCG BRADO3227 3428646 - 3428041 - | putative TRAP-type C4-dicarboxylate transport system, small permease component BRADO3228 3429640 - 3428639 - | putative extracellular solute-binding protein TERM 2257 3429700 - 3429722 + r 74 -14.9 -2.52464 | TGCGCGGATGGTGCA CCCTCTCCC CTTGT GGGAGAGGG TGGCTTCGCGCAGCG TERM 2258 3429796 - 3429740 - R 100 -24.7 -3.05384 | gap 1 GCTTCGCGCAGCGAA GCCGGGTGAGGGGTCTCTCTCCGC GATCGCATGT GCCGAGAGA-ACCCCTCACCCGGC GCCGAGCTGACGCTC BRADO3229 3431567 - 3429915 - | Hydantoin utilization protein B BRADO3230 3433654 - 3431570 - | Hydantoin utilization protein A TERM 2259 3432049 - 3432011 - G 73 -13.9 -3.18239 | opp_overlap 3432041, overlap 3432002 GACATAGCGCATGAA GGCGGAG-CGGCGCTCGCG CAC CG-GAGCACCGGCTGCGCC CGGCTCGACCAGGGC TERM 2260 3432342 - 3432309 - G 77 -16.6 -2.78384 | opp_overlap 3432304 3432325 TGCTGGCCGATGATA GCGCCGCGCTCGAC GGCGTG GACGCGCGCGGCGC TCGCCATGTTCTCGC BRADO3231 3434491 - 3433931 - | hypothetical protein TERM 2261 3433982 - 3434009 + g 100 -19.8 -3.28712 | GGGTCCCGGATCGGC GCCGCGTCGCGC TGAT GCGCGCCGCGGC TTGTCCGGGACGACG BRADO3232 3434980 - 3434567 - | hypothetical protein TERM 2262 3436761 - 3436734 - g 70 -13.4 -3.06302 | gap 1 ACGATCCGGATCGAA CCGCTCGCCGCCG CGC CGTCGGC-AGCGG CCCGGCCCGACAAGC BRADO3233 3435123 - 3437027 + | putative DEAD-box cold-shock protein, ATP-independent RNA helicase BRADO3234 3437065 - 3437484 + | hypothetical protein BRADO3235 3438252 - 3437593 - | thioredoxin peroxidase (AhpC, Alkyl hydroperoxide reductase) TERM 2263 3438359 - 3438345 - H 100 -8.6 -5.40072 | CCGTTTCGAAAAAAA GAGAAC ATC GTTCTC CTGCAGCCCCTGCGC BRADO3236 3438618 - 3439181 + | hypothetical protein TERM 2264 3439213 - 3439236 + T 100 -16.8 -4.77757 | CACATGGATTGTCGA GAGCGCGATG GCTT CATCGCGCTC TTTTGCTTTTTGGCC TERM 2265 3439537 - 3439513 - T 73 -12.9 -3.18274 | opp_overlap 3439513 3439517, overlap 3439517 GCGAGCGTAAGCGAA GCAATCCAGGG CGA CTCTGGATTGC TTCGCTGCGCTCGCA TERM 2266 3439513 - 3439537 + T 81 -15.1 -3.06796 | opp_overlap 3439513 3439517, overlap 3439517 GCGAGCGTAAGCGAA GCAATCCAGGG CGA CTCTGGATTGC TTCGCTGCGCTCGCA TERM 2267 3439706 - 3439679 - T 100 -13.4 -4.56597 | overlap 3439680 CGTCGCGTTCAAAAA GGAGTGCCCCGC TTGC ACGGGGCACTCG CTGATCGCTGAAAGG TERM 2268 3439705 - 3439680 - T 91 -16.9 -3.33744 | overlap 3439679 GTCGCGTTCAAAAAG GAGTGCCCCGC TTGC ACGGGGCACTC GCTGATCGCTGAAAG BRADO3238 3441589 - 3439733 - | putative signal peptide TERM 2269 3440979 - 3441013 + g 71 -9.2 -3.8647 | overlap 3440981 TCGCCGCGCGACGGC GTCGCCAGCGGCAG CCCGGCC TTGCCGATGGCGTC TTTGATCTCGTCGGT BRADO3239 3441795 - 3442289 + | hypothetical protein BRADO3240 3443560 - 3442304 - | putative arsenite permease BRADO3241 3444857 - 3443583 - | major facilitator transporter TERM 2270 3443689 - 3443669 - G 79 -16.1 -2.81464 | GCAGCAGCCAGCACA CGGCCACGG CGA CCGCGGCCG TTGCGCCGAGCACCA BRADO3242 3445575 - 3444901 - | hypothetical protein TERM 2271 3445395 - 3445360 - G 78 -14.8 -3.34013 | gap 1, opp_overlap 3445390 GACTGCGGCAAGCAA GTCAGCAC-CACGCGGT TTT ACCGCGTGCACGCCGAC CTCATCGCCGGCCTT BRADO3243 3446307 - 3445615 - | putative signal peptide BRADO3244 3447778 - 3446423 - | putative response regulator in two-component reguatory system, sigma54 dependent transcriptional regulator. BRADO3245 3449250 - 3447763 - | putative two-component system sensor protein TERM 2272 3448398 - 3448433 + g 72 -11.8 -3.57462 | gap 1, opp_overlap 3448397 GGTTCGCCGAGAGAC GGCCGACGGCGGC-AAG CCG CTCAGCCGCCGTTGCCC TTTCGCGCTCCGCTG BRADO3246 3451915 - 3449333 - | sensor histidine kinase TERM 2273 3450873 - 3450897 + g 81 -11.4 -3.95584 | overlap 3450879 TCGAGCTGGGAGGTC CGCTCGCGGA TCCGC TCCTCGAGCG TTTCGTTGATGCGCC TERM 2274 3451969 - 3451952 - H 100 -11.3 -4.99035 | CGAGGCAGATAAAAA GTTCCGC AGCG GCGGAAC GGACTGTTACTGTCG TERM 2275 3452133 - 3452163 + G 70 -11 -3.54424 | GCCGGAGAGCCAGAC GCTGTCGGCGATCG AGC CGGCCGACGACGGC TTTCGCACGCTGGCC TERM 2276 3452417 - 3452399 - g 81 -11 -4.07687 | opp_overlap 3452415, overlap 3452400 AGCTGCCGCTGAAAA CGCGGATC GAG GATCCGCA GCACGGGCTGATCTT BRADO3247 3452029 - 3453156 + | hypothetical protein BRADO3248 3453228 - 3453434 + | hypothetical protein BRADO3249 3453540 - 3455603 + | putative acyl-CoA carboxylase biotin-carrying subunit; alpha chain TERM 2277 3455813 - 3455827 + G 72 -11.4 -3.60296 | ATCTCGATCCGCATC GCCGAG GAT CTCGGC TTTCCGCTCGGCATG TERM 2278 3456241 - 3456260 + G 71 -3.4 -4.63218 | CGCCAGGGTCTATGA GACCTGCG GCGT CGACGGTC TTTTCTTCACCGGCA BRADO3250 3455714 - 3456580 + | putative carboxyvinyl-carboxyphosphonate phosphorylmutase BRADO3251 3456592 - 3456879 + | putative acylphosphatase BRADO3252 3457698 - 3456889 - | ubiquinone/menaquinone biosynthesis methyltransferase TERM 2279 3457887 - 3457877 - g 75 -3.2 -4.72333 | overlap 3457869 AATTACAGGCAAAAA GAAG CTT CCTC CCGCCGTCGAGCGCT BRADO3253 3457854 - 3458423 + | putative transcriptional regulatory protein TERM 2280 3458521 - 3458565 + G 71 -12.7 -3.28924 | overlap 3458522 TTCCGGGCGCTGCTG TCGCCGGAGGATTGGGGCCGG CTG CCGGTCTCGATCTGGCGGCGC TTCTCCAAGCGGCTC TERM 2281 3458522 - 3458564 + G 77 -16.2 -2.57211 | overlap 3458521 TCCGGGCGCTGCTGT CGCCGGAGGATTGGGGCCGG CTG CCGGTCTCGATCTGGCGGCG CTTCTCCAAGCGGCT BRADO3254 3458440 - 3459099 + | hypothetical protein TERM 2282 3459466 - 3459486 + G 77 -7.6 -4.3208 | gap 1 TGCTGATCGCCTGGG CGA-TGCGG CCCT CCGCAATCG TTTTGGCTTATGCGG TERM 2283 3460129 - 3460150 + G 70 -10.1 -3.72695 | overlap 3460130 TGTTGCGGATCGGAC TCGTCGTCG GCCG CGACGGCGG TTTCCTGGCGCGGAT BRADO3255 3459096 - 3460532 + | hypothetical protein BRADO3256 3461533 - 3460547 - | AraC/XylS family transcription factor TERM 2284 3461439 - 3461421 - G 74 -12.4 -3.55444 | TCGGCATTGCGGAAA TCGACGCG CTC CGCGCCGA GCTTACGGCTGGCGA BRADO3257 3462509 - 3461652 - | LysR family transcriptional regulator TERM 2285 3461690 - 3461709 + g 70 -11.4 -3.39327 | gap 1 GGAATGCCGCCGCCA GCGCG-CGC AAG GCGGCGCGC TTCTCCGTGTCACCG TERM 2286 3462335 - 3462376 + g 89 -17.2 -3.53811 | opp_overlap 3462309 CGGCGGTCAGCTGGA CGGCCCGCGGCGAGCGCT CCAGCA GGCGCTTGCCGAGTGCCG TTTCCAGCCGCTGCA BRADO3258 3462625 - 3463053 + | hypothetical protein lipB 3463778 - 3463056 - | lipoyltransferase TERM 2287 3464174 - 3464200 + r 75 -12.2 -3.55444 | opp_overlap 3464174, overlap 3464188 CATCGATTTGATACA CGGGCGCCACTG ATC CGGTGCCGTCCG TTTCCAGGCTCCGGC BRADO3261 3465427 - 3464390 - | putative Phage integrase/recombinase BRADO3262 3465611 - 3465351 - | hypothetical protein BRADO3263 3465883 - 3465608 - | hypothetical protein BRADO3264 3466000 - 3465938 - | hypothetical protein BRADO3265 3466848 - 3465976 - | hypothetical protein TERM 2288 3466732 - 3466764 + g 70 -8.3 -3.92641 | TGAGAGATAGATCGT GCAGCCGAGTGTG CTGACGC CACGCGCGGCAGC TTTATAGATGGCGTT TERM 2289 3467139 - 3467115 - R 72 -13.5 -2.75481 | opp_overlap 3467135, overlap 3467117 GGGCAACGCGAAGGA CACGGAGCCCG CGT CGGGCTTCGCG CCGCGTGAGACGGCG TERM 2290 3467137 - 3467117 - R 70 -12.5 -2.92246 | opp_overlap 3467135, overlap 3467115 GCAACGCGAAGGACA CGGAGCCCG CGT CGGGCTTCG CGCCGCGTGAGACGG TERM 2291 3467254 - 3467240 - R 71 -4.9 -4.41494 | overlap 3467241 CAGCCTCAACGAAAA CGCGG ATTTG CCGCA TCCGGTGGTCCCTGC BRADO3267 3467562 - 3467230 - | hypothetical protein TERM 2292 3467929 - 3467953 + G 80 -15 -3.39449 | gap 1, opp_overlap 3467914 3467917 CACGGCACCGCCGCA GGCG-CCGCGC CGTG GCGCGGTCGCC TTCATCTTCGTCACC TERM 2293 3468522 - 3468550 + G 73 -13.7 -3.16564 | overlap 3468522 GCGCGTTCCGCTGGC GCGCGGCGAACCC GCT GGGGGCGCTGCGC TTGCTGCGCTCGGAG TERM 2294 3469033 - 3469063 + G 82 -16.1 -3.21747 | gap 1 GTATTTCATCGGCGC CGGCGCGCCGCTGC ATCT GCCG-GGCGCGCCG TTCCTGCTGGCCTCG BRADO3268 3467867 - 3469144 + | putative tetracycline-efflux transporter TERM 2295 3469148 - 3469138 - T 71 -5.4 -4.49556 | CGCGGAGGAAAGAAA GTCA TGA TGAC GGCAGCGCGCGCAAA BRADO3269 3469607 - 3469233 - | hypothetical protein TERM 2296 3469745 - 3469717 - R 74 -9.5 -3.85698 | opp_overlap 3469733 GCTGTCGTCGATAAA CCGGGGCATCG CTCGCGC CGACGCCCGGG GAGGCGTCGGCTGTT TERM 2297 3469733 - 3469756 + r 81 -15.3 -3.04144 | opp_overlap 3469717 CGGGGCATCGCTCGC GCCGACGCC CGGGGA GGCGTCGGC TGTTGCACATAGGGG BRADO3270 3471063 - 3469837 - | putative ABC transporter, substrate binding protein TERM 2298 3470323 - 3470295 - G 72 -14.5 -2.77523 | opp_overlap 3470298, overlap 3470292 3470290 CGTTGACGAACAGCA GCAGCGCGGCGAG CTT CTGGCCGCCCTGC ACGATGCCGAACTCC BRADO3271 3472343 - 3471207 - | putative signal peptide BRADO3272 3473050 - 3472442 - | TetR/AcrR family transcriptional regulator BRADO3273 3473261 - 3474127 + | hypothetical protein TERM 2299 3474799 - 3474838 + G 72 -14.2 -3.02144 | gap 1 GTGCTGTGGGACATG GGCCGCATCGCCGCCGCCG ACA CGCCGGAGGCGAT-CGACC TGTTCCGCCAGGTGC BRADO3274 3474124 - 3475398 + | hypothetical protein BRADO3275 3475407 - 3475712 + | hypothetical protein BRADO3276 3476756 - 3476013 - | putative Short-chain dehydrogenase/reductase SDR TERM 2300 3476963 - 3476997 + H 75 -15 -2.79183 | CAGATGTGTCTTGTC TCTCCCCCGCGTCG CTGCAGA CGACGCGGGGGGAA TATCCTCGCACTACC BRADO3277 3477151 - 3477453 + | hypothetical protein TERM 2301 3477666 - 3477676 + G 77 -5.4 -4.7078 | opp_overlap 3477646 ACGCGACGGCTTTGG GATG CAG CATC TTTTTACGTGCTTGC TERM 2302 3477722 - 3477761 + G 72 -7 -4.2828 | gap 1 AGCCGCGAACCATGT CGCCACCC-CGCCCAAACG CAA CGTCTGGCAGCGGATGGCG TTTTCATCGCTCGCG BRADO3278 3477441 - 3477998 + | hypothetical protein BRADO3279 3478533 - 3478162 - | hypothetical protein purF 3480146 - 3478614 - | amidophosphoribosyltransferase BRADO3281 3480796 - 3480170 - | putative colicin V production protein, cvpA-like (dedE protein) (Pur regulon 18 kDa protein) radA 3482455 - 3480956 - | DNA repair protein RadA TERM 2303 3482216 - 3482199 - G 72 -5.5 -4.3739 | gap 1 GAGCCGCGCACAAAA CCGCCGCC GGT GACG-CGG TCGAGCTCGGTCATG BRADO3283 3483239 - 3482475 - | hypothetical protein TERM 2304 3483309 - 3483260 - H 93 -20.1 -3.09516 | opp_overlap 3483263 3483269 3483272, overlap 3483264 3483268 3483272 GTTGCGAGGAGCGAA GCGACGAAGCAATCCAGGGCCAC TTCC ACGGCCCTGGATTGTTTCGCTGC TCTCGAAATGACGAA TERM 2305 3483263 - 3483306 + H 83 -17.6 -2.62983 | opp_overlap 3483260 3483264 3483268 3483272, overlap 3483269 3483272 GCGAGGAGCGAAGCG ACGAAGCAATCCAGGGCC ACTTCCAC GGCCCTGGATTGTTTCGC TGCTCTCGAAATGAC TERM 2306 3483305 - 3483264 - H 90 -20.3 -2.55544 | opp_overlap 3483263 3483269 3483272, overlap 3483260 3483268 3483272 CGAGGAGCGAAGCGA CGAAGCAATCCAGGGCCAC TTCC ACGGCCCTGGATTGTTTCG CTGCTCTCGAAATGA TERM 2307 3483301 - 3483268 - H 76 -13.9 -3.22388 | opp_overlap 3483263 3483269 3483272, overlap 3483264 3483260 3483272 GAGCGAAGCGACGAA GCAATCCAGGGCCAC TTCC ACGGCCCTGGATTGT TTCGCTGCTCTCGAA TERM 2308 3483269 - 3483300 + H 93 -16 -3.70149 | opp_overlap 3483268 3483264 3483260 3483272, overlap 3483263 3483272 AGCGAAGCGACGAAG CAATCCAGGGCC ACTTCCAC GGCCCTGGATTG TTTCGCTGCTCTCGA TERM 2309 3483272 - 3483297 + H 83 -11.9 -3.98075 | opp_overlap 3483272 3483268 3483264 3483260, overlap 3483269 3483263 GAAGCGACGAAGCAA TCCAGGGCC ACTTCCAC GGCCCTGGA TTGTTTCGCTGCTCT TERM 2310 3483297 - 3483272 - H 76 -13.3 -3.41581 | opp_overlap 3483269 3483263 3483272, overlap 3483268 3483264 3483260 GAAGCGACGAAGCAA TCCAGGGCCAC TTCC ACGGCCCTGGA TTGTTTCGCTGCTCT TERM 2311 3483711 - 3483732 + G 70 -10.8 -3.58269 | overlap 3483730 CGCTATCGCGAGCAC GTCGCCGC CAATGC GCGGCGGC TTTCAGCCTGAGTTC BRADO3284 3483456 - 3483743 + | hypothetical protein BRADO3285 3484718 - 3483735 - | AraC/XylS family transcription factor TERM 2312 3484591 - 3484581 - G 72 -8.2 -4.07885 | opp_overlap 3484583, overlap 3484582 CACCTCCGCTGAAAA GCCG TGG CGGC GCGGCGGCTCCGGCG BRADO3286 3484806 - 3485549 + | putative alpha/beta hydrolase family protein BRADO3287 3485713 - 3486207 + | hypothetical protein TERM 2313 3486459 - 3486488 + T 77 -13.6 -3.28712 | opp_overlap 3486423, overlap 3486433 GAGGCCGGCGCTGCA CACTCTCTCCGC CAACAT GCGGAGAGCGTG TTATGGCGAGGCGCG BRADO3288 3487277 - 3486489 - | exodeoxyribonuclease III (exonuclease III) (exo III) (AP endonuclease VI) TERM 2314 3486538 - 3486583 + g 100 -18.1 -4.09685 | overlap 3486539 CAGGCCGGTGCGTGG TCGCTGGCGCCGTCCTCGCCG CGAA TGGCGCGGTCGACGCCGGCGG TTTTGAGCCGTGGCG TERM 2315 3486539 - 3486582 + g 100 -19.4 -3.05597 | overlap 3486538 AGGCCGGTGCGTGGT CGCTGGCGCCGTCCTCGCCG CGAA TGGCGCGGTCGACGCCGGCG GTTTTGAGCCGTGGC BRADO3289 3487305 - 3487547 + | hypothetical protein BRADO3290 3488135 - 3487557 - | TetR family transcriptional regulator TERM 2316 3487902 - 3487872 - G 76 -16 -2.87683 | opp_overlap 3487876, overlap 3487860 ATAGCGCGCCACATA GGCCGCCAGCGCCG CCT CGGCGCCGGCTGTC TCAATATCGCGGTCC TERM 2317 3487876 - 3487898 + g 79 -16.2 -2.93382 | opp_overlap 3487872 3487860 CGCGCCACATAGGCC GCCAGCGCCG CCT CGGCGCCGGC TGTCTCAATATCGCG TERM 2318 3488915 - 3488945 + G 79 -11.7 -3.85698 | opp_overlap 3488914 CGGCACGCTCAAGAT GCTGGGCCGCTGC ACCAC GGTGCGGCCCGGC TTTCTCGCCAAGGCG BRADO3291 3488229 - 3489047 + | oxidoreductase TERM 2319 3489685 - 3489675 - g 77 -6.8 -4.56607 | overlap 3489684 CGAGCAACGAGAAAA GGTC AAG GACC GCTGCGTGGGCACGC BRADO3292 3489484 - 3490077 + | putative outer membrane lipocalin, blc-like BRADO3293 3490375 - 3490151 - | hypothetical protein TERM 2320 3490300 - 3490338 + g 95 -19.7 -2.87132 | gap 1, opp_overlap 3490305 3490307, overlap 3490302 3490307 3490313 AGCAGATCGCATTCC CAGAACAGGCCCCG-CCG GCGA CGGACGGGGCCTTTTCTG TGTCTGCACAAACCC TERM 2321 3490302 - 3490336 + g 79 -16.5 -2.98823 | gap 1, opp_overlap 3490305 3490307, overlap 3490300 3490307 3490313 CAGATCGCATTCCCA GAACAGGCCCCG-CCG GCGA CGGACGGGGCCTTTTC TGTGTCTGCACAAAC TERM 2322 3490333 - 3490305 - G 71 -12.4 -3.31263 | gap 1, opp_overlap 3490302 3490300 3490307 3490313, overlap 3490307 ATCGCATTCCCAGAA CAGGCCCCG-CCG GCGA CGGACGGGGCCTT TTCTGTGTCTGCACA TERM 2323 3490331 - 3490307 - G 78 -15 -3.22475 | gap 1, opp_overlap 3490307 3490302 3490300 3490313, overlap 3490305 CGCATTCCCAGAACA GGCCCCG-CCG GCGA CGGACGGGGCC TTTTCTGTGTCTGCA TERM 2324 3490307 - 3490331 + g 100 -15 -4.64844 | gap 1, opp_overlap 3490305 3490307, overlap 3490302 3490300 3490313 CGCATTCCCAGAACA GGCCCCG-CCG GCGA CGGACGGGGCC TTTTCTGTGTCTGCA BRADO3294 3490388 - 3491617 + | putative threonine tRNA synthetase (fragment) TERM 2325 3491666 - 3491646 - f 73 -12.5 -3.13403 | overlap 3491644 3491649 GCGGCGCGACCAATA CGACGCGCC GCA GGCGCGTTG GGGCAGGGCGCTCAC BRADO3295 3491713 - 3492204 + | signal peptide BRADO3296 3492282 - 3492842 + | hypothetical protein BRADO3297 3493239 - 3494222 + | putative signal peptide BRADO3299 3494792 - 3494995 + | hypothetical protein BRADO3301 3497180 - 3495999 - | putative alanine racemase (alr) TERM 2326 3496159 - 3496141 - G 72 -11.6 -3.5393 | overlap 3496142 AGCAGGGTGGCGAAA TGGCCGCG GCG CGCGGCCT TCGGCGGCAGGTCGG TERM 2327 3496158 - 3496142 - G 72 -15.1 -2.72144 | overlap 3496141 GCAGGGTGGCGAAAT GGCCGCG GCG CGCGGCC TTCGGCGGCAGGTCG BRADO3302 3498728 - 3497226 - | replicative DNA helicase BRADO3303 3499123 - 3499025 - | hypothetical protein TERM 2328 3499384 - 3499355 - R 75 -13.5 -3.06796 | CGTCATCCCAGGCAA GCTGCGAAGCCGC GCCG GTGGCATCGCAGC CCCGACCCGGAATCC BRADO3304 3500782 - 3499523 - | putative cyclopropane-fatty-acyl-phospholipid synthase (cyclopropane fatty acid synthase) (CFA synthase) TERM 2329 3501016 - 3501004 - H 95 -10.5 -4.58395 | opp_overlap 3501005, overlap 3501006 CCGATCCGCTAAAAA GGCGG CGG CCGCC GGTGCTTAGCCGGTG TERM 2330 3501659 - 3501649 - g 76 -8.2 -4.18018 | overlap 3501650 CCTGCCGAGGCAAAA CCCG AGG CGGG AGCGGAGGCCAAGCC BRADO3305 3501187 - 3501948 + | hypothetical protein TERM 2331 3501954 - 3501986 + T 95 -16.3 -3.86346 | opp_overlap 3501960, overlap 3501960 GACCCAGTGAGGCAG CAAAAAGCCCGGCTC GAT GAGCCGGGCTTCGTG TTTATGGAGCGATGC TERM 2332 3501980 - 3501960 - T 100 -18.3 -4.7497 | opp_overlap 3501960 3501954 GTGAGGCAGCAAAAA GCCCGGCTC GAT GAGCCGGGC TTCGTGTTTATGGAG TERM 2333 3501960 - 3501980 + T 95 -18.3 -3.50335 | opp_overlap 3501960, overlap 3501954 GTGAGGCAGCAAAAA GCCCGGCTC GAT GAGCCGGGC TTCGTGTTTATGGAG rplI 3502600 - 3502010 - | 50S ribosomal protein L9 BRADO3307 3503599 - 3502652 - | hypothetical protein TERM 2334 3503732 - 3503712 - R 91 -15.4 -3.89695 | GTTCGAGAAACAGAA CCGGCGGC GCGAG GCCGCCGG TCAGAGGTCCACGCT rpsR 3503986 - 3503747 - | 30S ribosomal protein S18 rpsF 3504453 - 3503992 - | 30S ribosomal protein S6 fabD 3504799 - 3505758 + | malonyl CoA-acyl carrier protein transacylase (MCT) fabG 3505792 - 3506529 + | 3-oxoacyl-[acyl-carrier-protein] reductase BRADO3312 3506608 - 3506940 + | hypothetical protein acpP 3506964 - 3507203 + | acyl carrier protein TERM 2335 3507225 - 3507262 + F 74 -12.8 -3.36452 | gap 1, opp_overlap 3507229, overlap 3507229 GGCAAGAGTTTGCGC GAAACCGGCCGATCCGT CTTGT GCGG-TCGACCGGTTTC TTGCTGTTGGCGGCT TERM 2336 3507229 - 3507258 + F 76 -7.8 -4.33153 | gap 1, opp_overlap 3507229, overlap 3507225 AGAGTTTGCGCGAAA CCGGCCGATCCGT CTTGT GCGG-TCGACCGG TTTCTTGCTGTTGGC TERM 2337 3508037 - 3508049 + G 77 -6.9 -4.56597 | overlap 3508038 CGCCGATCTGTCGAA TCGGC ATG GCCGG TTTTTGCGCGGCGCG fabF 3507427 - 3508692 + | 3-oxoacyl-(acyl carrier protein) synthase II BRADO3315 3509021 - 3510238 + | hypothetical protein TERM 2338 3511089 - 3511113 + G 75 -7 -4.36914 | overlap 3511090 AAATGCTGGGGAAGG GCGGGCCGGT CGGCC GCCGGCTCGA TTTTCTCGCCCAGGA BRADO3316 3510362 - 3511249 + | hypothetical protein gmk 3511253 - 3511912 + | guanylate kinase BRADO3318 3514311 - 3511933 - | hypothetical protein TERM 2339 3513023 - 3513048 + g 70 -10.3 -3.68351 | overlap 3512996 GCCGGAGCCTGGGAG GCCAGAGCGGC TGCC GCGGCGCTGGC TTTGGCTGCTGCGAC TERM 2340 3513098 - 3513130 + g 70 -13.3 -3.01712 | GCCGCAACAATCTGA GCGGCGGCCATCTGC GCG GCGGCTGGCTGCGGC TGTTGCGGCGGAGGC TERM 2341 3513688 - 3513724 + g 70 -10.7 -3.54029 | overlap 3513682 CATGGGAATCGGCGC TTCGGGCTTCGCCGCCT TCG AGGCTGCGGTGGCCGGA TTGTCGTTCGTGCCC BRADO3319 3514630 - 3515037 + | hypothetical protein BRADO3320 3516576 - 3515155 - | hypothetical protein BRADO3321 3517669 - 3516611 - | zinc-containing alcohol dehydrogenase family protein TERM 2342 3516926 - 3516890 - G 70 -10.9 -3.60296 | GACGGCGACCGCAAA GGCCATCGACTTCTC GTTCCCG GCGAAGTCGACGACC TCGTCAAAGCCGCCG ksgA 3518556 - 3517696 - | dimethyladenosine transferase pdxA 3519554 - 3518553 - | 4-hydroxythreonine-4-phosphate dehydrogenase BRADO3324 3520417 - 3519554 - | hypothetical protein TERM 2343 3519809 - 3519848 + g 83 -15 -3.65046 | overlap 3519811 GGAGGTCTTGACGAC GATCTCCTTGACGACGGC ATTC GCCGTCGTCCTGGAGATG TTGTTGGCGTCCGCG TERM 2344 3519811 - 3519846 + g 89 -17.6 -3.40611 | overlap 3519809 AGGTCTTGACGACGA TCTCCTTGACGACGGC ATTC GCCGTCGTCCTGGAGA TGTTGTTGGCGTCCG BRADO3325 3523212 - 3520708 - | putative organic solvent tolerance protein OstA (ImpA) TERM 2345 3522797 - 3522835 + g 70 -11.7 -3.43203 | gap 1 GTGATCTTGCCGTCG GCGTCGGTCATGCGGATG TTGC CTTCCGCATG-CAGGCGC TTGGTCTTCTGGTCG BRADO3326 3524309 - 3523212 - | putative permease TERM 2346 3523283 - 3523246 - G 81 -8.9 -4.51799 | overlap 3523247 3523266 AGCAAAGCCATAAAA CCGGTGAGGCCGCCGAC GAAC ACCGGCAGCCACGCCGC AGCGATCGGATCCAT TERM 2347 3523282 - 3523247 - G 71 -12.4 -3.29995 | overlap 3523246 3523266 GCAAAGCCATAAAAC CGGTGAGGCCGCCGAC GAAC ACCGGCAGCCACGCCG CAGCGATCGGATCCA BRADO3327 3525475 - 3524306 - | putative permease TERM 2348 3525854 - 3525878 + G 72 -5.6 -4.37886 | gap 1, overlap 3525860 CGTCCCGCTGTCGGC CGCTCCCCGCG GCAT CGTGGCG-GCG TTTTGTGACGACTCG BRADO3328 3525813 - 3527312 + | leucyl aminopeptidase BRADO3329 3527328 - 3527780 + | DNA polymerase III subunit chi BRADO3330 3527995 - 3528486 + | hypothetical protein BRADO3331 3530391 - 3528523 - | ABC transporter ATP-binding protein BRADO3332 3530644 - 3530459 - | hypothetical protein TERM 2349 3530782 - 3530758 - R 100 -16.4 -5.19261 | AAATGCATGAAAAAA GCCCCGGCGC GGGGG ACGCCGGGGC AATGCGAGTTCGGAT BRADO3333 3531106 - 3530843 - | putative sulfur globule protein precursor ndk 3531391 - 3531813 + | nucleoside diphosphate kinase (NDK) (NDP kinase) (nucleoside-2-P kinase) BRADO3335 3531860 - 3532744 + | hypothetical protein TERM 2350 3532782 - 3532812 + T 93 -8.2 -5.14563 | opp_overlap 3532786, overlap 3532786 GAACTGGGATTGATA GTAAGGCCGCTCAT GGT ACGAGCGGCCTTTG TTTTTTGATCAGGGA TERM 2351 3532786 - 3532808 + T 100 -13.4 -5.0917 | opp_overlap 3532786, overlap 3532782 TGGGATTGATAGTAA GGCCGCTCAT GGT ACGAGCGGCC TTTGTTTTTTGATCA TERM 2352 3532808 - 3532786 - T 84 -15.6 -3.2794 | opp_overlap 3532786 3532782 TGGGATTGATAGTAA GGCCGCTCAT GGT ACGAGCGGCC TTTGTTTTTTGATCA BRADO3336 3533648 - 3532821 - | molybdenum storage protein alpha subunit (Mo storage protein alpha subunit) (MoSto alpha subunit) BRADO3337 3534475 - 3533663 - | molybdenum storage protein beta subunit (Mo storage protein beta subunit) (MoSto beta subunit) TERM 2353 3533819 - 3533864 + gH 74 -9 -3.84639 | opp_overlap 3533846, overlap 3533815 3533849 GGAGTCGGCGAGGCC CTTGGCCTTCATCTCGGCGA CCGAAA TCTTCGGGATGAAGGTCGCG TTCTTCTCCGTCTTG BRADO3338 3534469 - 3534708 + | hypothetical protein TERM 2354 3535215 - 3535242 + FH 71 -6.2 -4.24948 | AGCATCGCCAATGTC CAGCCGCTGC CGCTGGAC GCCGTGGCTG TTTTCGCTATAGTCA BRADO3339 3535293 - 3535673 + | hypothetical protein BRADO3340 3537244 - 3535745 - | Ppx/GppA family phosphatase BRADO3341 3539467 - 3537272 - | polyphosphate kinase BRADO3342 3540278 - 3539601 - | hypothetical protein BRADO3343 3540894 - 3540340 - | putative CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (phosphatidylglycerophosphate synthase) (PGP synthase) purM 3541047 - 3542126 + | phosphoribosylaminoimidazole synthetase TERM 2355 3542198 - 3542219 + G 74 -12.3 -3.53091 | gap 1, opp_overlap 3542186, overlap 3542201 ACATGGCCGCACTCA TCC-GCGCGG CGG CCGCGCCGGA TTTCCCGGCCGAGAT TERM 2356 3542521 - 3542554 + G 72 -14.5 -2.69489 | gap 1, overlap 3542518 3542517 CCGCACGGCCAGGCG CTG-CGCGCCGGCGTG AAG CTCTCCGGCGCGACAG TCCATTTCGTGATTC purN 3542140 - 3542793 + | phosphoribosylglycinamide formyltransferase (GART) (GAR transformylase) (5'-phosphoribosylglycinamide transformylase) TERM 2357 3543042 - 3543010 - T 75 -13.4 -3.02461 | overlap 3543012 CAAGGCTGCGCAATA CACCGCCCTCTCCC CTTGT GGGAGAGGGCATCG GCGGCAGATCCGCAG TERM 2358 3543197 - 3543179 - T 100 -11.6 -5.47218 | overlap 3543180 GGCGAGGCAAAAAAA TCCCCGGC GGG GCCGGGGG CGCATCAAAGGCTGG TERM 2359 3543196 - 3543180 - T 91 -15.1 -3.87608 | overlap 3543179 GCGAGGCAAAAAAAT CCCCGGC GGG GCCGGGG GCGCATCAAAGGCTG cspA 3543513 - 3543304 - | cold shock protein, DNA binding TERM 2360 3543404 - 3543450 + g 83 -14.5 -3.72893 | gap 1, opp_overlap 3543419, overlap 3543405 GTCAGTCCGGCACGC TCGA-CGGCCGAGATATGGACG AAGA CGTCCTTGTCTCCGCCGGTCGG TTTGATGAAGCCATA TERM 2361 3543405 - 3543449 + g 76 -15.8 -2.83522 | gap 1, opp_overlap 3543419, overlap 3543404 TCAGTCCGGCACGCT CGA-CGGCCGAGATATGGACG AAGA CGTCCTTGTCTCCGCCGGTCG GTTTGATGAAGCCAT TERM 2362 3543572 - 3543543 - R 100 -10 -5.90981 | gap 1 CTAGACGAAAAAAAA GACGCGGCCACGC TCATC GCGTG-CCACGCC ACAAACGGGCTTCCC TERM 2363 3543588 - 3543578 - R 71 -8.2 -3.89346 | GTGCCACGCCACAAA CGGG CTT CCCG GGATCTGCTCAATTT BRADO3350 3545333 - 3544290 - | LysR family transcriptional regulator BRADO3351 3545389 - 3546030 + | hypothetical protein TERM 2364 3546092 - 3546050 - g 83 -12.9 -3.84648 | gap 2, overlap 3546045 GTCAAGATGACGAAA TCGAATTCACGCGCGATCTCG GTC CGC-ATCGCGCGTG-ATCCGA ACGATCTGATGCTCG BRADO3352 3546017 - 3546640 + | putative acetyltransferase, GNAT family protein TERM 2365 3546969 - 3547005 + G 70 -11.6 -3.36878 | gap 1, opp_overlap 3546968 3546977 CTTTGCCGACTACAT GTCGAACATG-CGCAGC ATCC GCTGCGTCGTGCTCGGC TTCTCGCTCGATGAG BRADO3353 3546637 - 3547218 + | putative hydrolase, isochorismatase family protein BRADO3355 3547442 - 3547609 + | hypothetical protein TERM 2366 3547796 - 3547823 + T 77 -13.4 -3.35679 | gap 1 GTGGTCGCCCGCTCA GGGCCG-GTCGAC CCT GACGACGCGGCCC TTGTCGATGGCGAGC rnd 3548962 - 3547793 - | ribonuclease D (RNase D) BRADO3357 3549249 - 3549109 - | hypothetical protein BRADO3358 3550803 - 3549328 - | hypothetical protein aspS 3551062 - 3552834 + | aspartyl-tRNA synthetase TERM 2367 3552863 - 3552919 + F 77 -15.1 -2.59683 | opp_overlap 3552863, overlap 3552868 TGTAGCCCGGATGAA CGACAGCGACATCCGGGTTCGCACGCG CAG CTCATGAGACTTCGGATGTCGCTTTCG CTTCTGACGTAGGGT TERM 2368 3552919 - 3552863 - f 73 -12.9 -3.14931 | opp_overlap 3552863 3552868 TGTAGCCCGGATGAA CGACAGCGACATCCGGGTTCGCACGCG CAG CTCATGAGACTTCGGATGTCGCTTTCG CTTCTGACGTAGGGT TERM 2369 3552868 - 3552914 + F 78 -12.2 -3.80893 | opp_overlap 3552863, overlap 3552863 CCCGGATGAACGACA GCGACATCCGGGTTCGCACGCG CAG CTCATGAGACTTCGGATGTCGC TTTCGCTTCTGACGT TERM 2370 3552962 - 3552942 - f 81 -13.9 -3.53811 | opp_overlap 3552923 3552924 CGTAGGGTGGGCAAA GCGGCCGCC GCA GGCGGCAGC GTGCCCACCGTCCAT BRADO3360 3553138 - 3553851 + | putative RlpA family protein BRADO3361 3554501 - 3553866 - | putative fatty acid hydroxylase family protein TERM 2371 3554748 - 3554718 - R 71 -13.9 -2.64099 | overlap 3554691 3554717 GCGCGTGACGAGAAT GGCGCCAGAGCGC ATGCG GCGCTCAGGCGGC CGTAACATCATCGAC BRADO3362 3555520 - 3554864 - | hypothetical protein BRADO3363 3556089 - 3555538 - | hypothetical protein BRADO3364 3557511 - 3556099 - | hypothetical protein BRADO3365 3558490 - 3557819 - | hypothetical protein BRADO3366 3561211 - 3559166 - | hypothetical protein TERM 2372 3561419 - 3561409 - H 83 -6.8 -4.87807 | TCAAGAGACCAAAAA TCCG GGT CGGA AACGCTGGAGCACGT BRADO3367 3561435 - 3563747 + | malic enzyme TERM 2373 3563766 - 3563808 + F 95 -10.5 -4.44667 | gap 1, opp_overlap 3563767, overlap 3563767 TATTGACGTGATCGA AGTGTGGCGGAATTCGTCCG GTTT CGGTCGCATTCCGCC-CGCC TTTATTGTTGAAAAG TERM 2374 3563767 - 3563807 + F 77 -14 -3.26318 | gap 1, opp_overlap 3563767, overlap 3563766 ATTGACGTGATCGAA GTGTGGCGGAATTCGTCCG GTTT CGGTCGCATTCCGCC-CGC CTTTATTGTTGAAAA BRADO3368 3563895 - 3564350 + | hypothetical protein BRADO3369 3564920 - 3564360 - | putative dihydrofolate reductase TERM 2375 3564827 - 3564813 - G 72 -7 -4.19746 | overlap 3564815 CGCATCGGAAAAGAA CACGGC GTC GCCGGG GAATTTGAGCGACGC TERM 2376 3564844 - 3564815 - G 70 -10 -3.69506 | overlap 3564813 CATCGGAAAAGAACA CGGCGTCGCC GGGGAATTTG AGCGACGCCG GCATCACATTGTGGG BRADO3370 3565905 - 3564940 - | putative polysaccharide deacetylase; putative chitin deacetylase BRADO3371 3566662 - 3566081 - | putative glutathione peroxidase TERM 2377 3566523 - 3566499 - G 70 -11.3 -3.53012 | overlap 3566500 GGCTTGCCGGCGAAA TCGGCCAGCCG AAT CGGCTCGCCGG AGGGCACCGGGAAGG TERM 2378 3566522 - 3566500 - G 72 -14.8 -2.71712 | overlap 3566499 GCTTGCCGGCGAAAT CGGCCAGCCG AAT CGGCTCGCCG GAGGGCACCGGGAAG TERM 2379 3566754 - 3566701 - R 88 -14.8 -3.71848 | gap 3, opp_overlap 3566709 CCCCGTCAGCAAGAA TGCTCCAACGCG--CGC-CGGCCGCTT GTC AAACGGCCACGCGTTCGCGTTGGATCA GACTGCTCTCCCGCA BRADO3372 3568588 - 3566816 - | putative ErfK/YbiS/YcfS/YnhG family protein; putative signal peptide TERM 2380 3568569 - 3568556 - G 83 -9.5 -4.30995 | overlap 3568540 3568538 3568553 3568558 GGCGGCACAAAAGAA CCGCC CCCT GGCGG CCACACGAACGCAGA BRADO3373 3568816 - 3569367 + | hypothetical protein BRADO3374 3569608 - 3569357 - | hypothetical protein BRADO3375 3570474 - 3569707 - | hypothetical protein BRADO3376 3572309 - 3570513 - | toxin/protease ABC transporter ATP-binding protein TERM 2381 3571849 - 3571791 - G 72 -13 -3.14132 | gap 1, overlap 3571776 3571794 3571806 GGCGTGCTGCAGGAA GC-ACAGCGCGACGAACACCGGCGTCC ACGGCA GGTCGCAGGCGATCGCCGCGGTGCCGC TGGAGATGCAGTCGC TERM 2382 3571845 - 3571794 - G 75 -15.7 -2.77899 | overlap 3571776 3571791 3571806 GTGCTGCAGGAAGCA CAGCGCGACGAACACCGGCGTCC ACGGCA GGTCGCAGGCGATCGCCGCGGTG CCGCTGGAGATGCAG TERM 2383 3572331 - 3572291 - G 78 -14.3 -3.53012 | gap 2, opp_overlap 3572290 3572286 CCGGTCGCGCGCAAA CGACCGTGATCGACATCAC AGAGG GTGATGTCGATC-CG-TCG GTGCTTGAGTTGGCC TERM 2384 3572922 - 3572953 + G 72 -5 -4.50976 | gap 1, overlap 3572914 3572923 CCGCTGATCGTGCTC GCCGTC-GCGGTGCC GAT GGCGGCGCTGATGGG TTTTGTGGTGTCGGG BRADO3377 3572391 - 3574097 + | hypothetical protein BRADO3378 3575455 - 3574106 - | putative secretion HlyD family protein, putative RTX secretion protein D TERM 2385 3574819 - 3574803 - G 71 -15.1 -2.52623 | opp_overlap 3574810, overlap 3574802 3574800 TTGCGCGGATAATAG CCGGCGG CGA CCGCCGG GCGGACGTTGTTCAT TERM 2386 3574810 - 3574826 + g 71 -9.3 -3.78034 | opp_overlap 3574803 3574802 3574800 GATAATAGCCGGCGG CGACCGC CGG GCGGACG TTGTTCATCTGCGTG BRADO3379 3577794 - 3575596 - | PE-PGRS family protein (fragment) TERM 2387 3577356 - 3577312 - G 72 -13.4 -3.14132 | CGCCCCGCCGACCAA GTCTCCGGCGACATCGCCGA TGACG TCGGCGGCGCCGCCGATGGC GTCCCCGACGTCACC BRADO3381 3578200 - 3577931 - | hypothetical protein BRADO3382 3578426 - 3578277 - | hypothetical protein TERM 2388 3579134 - 3579119 - g 70 -8.2 -3.93782 | opp_overlap 3579119 3579118 3579121 3579124, overlap 3579122 TCATCGAAGAGGAAA GCACCG GCGT CGGCGC GTTGTCGACCTTGCA TERM 2389 3579124 - 3579171 + G 72 -14.8 -2.77899 | gap 1, opp_overlap 3579119 3579122, overlap 3579119 3579118 3579121 GAAGAGGAAAGCACC GGCGTCGGCGCG-TTGTCGACCT TGC AGCGCGGCTATCGCGCCGATGCC TGCTTCATCCCGGAA BRADO3383 3578602 - 3579882 + | acetylornithine deacetylase TERM 2390 3579902 - 3579928 + F 70 -11.6 -3.20382 | overlap 3579903 CGAGGATCGGACTGT GGGCGATGACCT CGC AGGTCATTGCCG TTGCTCCATCTCGCG TERM 2391 3579903 - 3579927 + F 76 -15.1 -2.52015 | overlap 3579902 GAGGATCGGACTGTG GGCGATGACCT CGC AGGTCATTGCC GTTGCTCCATCTCGC BRADO3384 3579907 - 3580401 + | putative phenylacetic acid degradation-like protein TERM 2392 3580813 - 3580780 - g 72 -7.3 -4.2349 | gap 1 CGCCTATATGGAAAA CGGCATGGTGCGCGGC GCC GCCGAGCTGCAT-CCG CCGGAGCAGTCCGAG BRADO3385 3580529 - 3581185 + | GNAT family acetyltransferase TERM 2393 3581243 - 3581213 - T 100 -19 -5.1675 | opp_overlap 3581214, overlap 3581214 CCATGGATCAAAAAA GGGCGCGACAGCGA TCA TCGCTGCCGCGCCT TTTTGTCGAAGAGCT TERM 2394 3581214 - 3581242 + T 100 -20.3 -4.82901 | opp_overlap 3581213 3581214 CATGGATCAAAAAAG GGCGCGACAGCGA TCA TCGCTGCCGCGCC TTTTTGTCGAAGAGC TERM 2395 3581242 - 3581214 - T 100 -22.5 -3.69327 | opp_overlap 3581214, overlap 3581213 CATGGATCAAAAAAG GGCGCGACAGCGA TCA TCGCTGCCGCGCC TTTTTGTCGAAGAGC BRADO3386 3581586 - 3581284 - | hypothetical protein BRADO3387 3582362 - 3581664 - | hypothetical protein fabG 3583134 - 3582454 - | 3-ketoacyl-(acyl-carrier-protein) reductase BRADO3389 3583266 - 3583967 + | hypothetical protein BRADO3390 3584052 - 3584270 + | hypothetical protein BRADO3391 3584812 - 3584351 - | hypothetical protein BRADO3392 3584846 - 3585043 + | hypothetical protein BRADO3393 3585131 - 3585508 + | hypothetical protein TERM 2396 3585570 - 3585533 - T 76 -10.6 -3.87075 | gap 1, opp_overlap 3585569, overlap 3585539 AGGACCGCTCAGAAA GCAAAAGGGCCGGAACC TCATC GGT-CCGACCCTTCAGC AGCAGCGCGCTACGT TERM 2397 3585564 - 3585539 - T 91 -9 -4.61873 | gap 1, overlap 3585533 GCTCAGAAAGCAAAA GGGCCGGAACC TCATC GGT-CCGACCC TTCAGCAGCAGCGCG BRADO3394 3585798 - 3585607 - | putative glutamine synthetase translation inhibitor GstI-like. glnII 3586303 - 3587376 + | glutamine synthetase II (glutamate--ammonia ligase II) (GSII) TERM 2398 3587411 - 3587451 + F 100 -22.8 -3.53343 | gap 1, opp_overlap 3587432, overlap 3587416 CGGGGCAGGGGCTGA CGTGATGATCCGCCGGAGC AACC GCTCCGGCGGATCATT-CG TTTGGGAGCCCGCTT TERM 2399 3587416 - 3587447 + F 100 -24.6 -3.51232 | opp_overlap 3587432, overlap 3587411 CAGGGGCTGACGTGA TGATCCGCCGGAGC AACC GCTCCGGCGGATCA TTCGTTTGGGAGCCC BRADO3396 3587581 - 3588039 + | putative signal peptide TERM 2400 3589390 - 3589422 + G 72 -14.7 -2.76453 | overlap 3589383 CATTCCTTTCCGCAG GCCGGGCAGGGCTCG CTG CGCGCGCTGGCCGGC TGCTTCGGATTCTCG BRADO3397 3588142 - 3589764 + | ABC transporter ATP-binding protein TERM 2401 3589762 - 3589788 + T 79 -10.9 -3.9122 | gap 1, overlap 3589766 CCGGGCCTGCGCAGC TGATCGCGTGGC GGCT GCCGCGCG-TCA TTGTTTCAGCCAGTC TERM 2402 3589766 - 3589785 + T 71 -12.8 -3.02371 | overlap 3589762 GCCTGCGCAGCTGAT CGCGTGGC GGCT GCCGCGCG TCATTGTTTCAGCCA BRADO3398 3590679 - 3589786 - | putative dienelactone hydrolase family protein, putative signal peptide BRADO3399 3592786 - 3590690 - | sensor histidine kinase TERM 2403 3592670 - 3592727 + g 75 -7 -4.35524 | gap 3, opp_overlap 3592668, overlap 3592660 3592673 3592683 GCTTTCGGCCAAAGC TGTTTCGGCCTCA-GCGC-GTTTGCCGGC GTC GGCGGCGAACCGCGCCTGCAGCCGG-GCA TTTTCACTTTCGAGC BRADO3400 3593221 - 3592976 - | putative signal peptide BRADO3401 3593819 - 3593385 - | hypothetical protein TERM 2404 3593902 - 3593930 + H 73 -8.8 -4.10179 | gap 1 GGGGCTTCGCAATTC CGCCCGTGCCGGA GCAT TCCGG-GCTGGCG TTTGTCTAGATTATG BRADO3402 3594045 - 3595085 + | putative signal peptide BRADO3403 3595152 - 3595409 + | hypothetical protein TERM 2405 3596715 - 3596688 - f 72 -12 -3.37344 | gap 1, opp_overlap 3596695, overlap 3596691 CTCCGAGCCAACCAA CAC-GTGCTGCCG GGC CGGCAGCGCAGTG GCCGGCGGCCGTCCT BRADO3405 3596781 - 3597893 + | putative alkanesulfonate monooxygenase (FMNH2-dependent aliphatic sulfonate monooxygenase) BRADO3406 3597904 - 3598818 + | putative branched-chain amino acid ABC transporter, ATP-binding protein BRADO3407 3598818 - 3599708 + | putative branched-chain amino acid ABC transporter, permease protein BRADO3408 3599708 - 3600763 + | putative branched-chain amino acid ABC transporter, permease protein BRADO3409 3600793 - 3602139 + | branched-chain amino acid ABC transporter substrate-binding protein BRADO3410 3602356 - 3603132 + | high-affinity branched-chain amino acid ABC transporter ATP-binding protein TERM 2406 3604355 - 3604384 + T 80 -14.3 -3.16055 | gap 1, opp_overlap 3604343, overlap 3604345 GAAGGCGGGGAGTGA CGTTCTGCTGCGGC GCG GCCGCAGC-GATCG TTAGTCGGCCATTTC TERM 2407 3604405 - 3604433 + T 93 -16.8 -3.79906 | CGGCCATTTCGGCAG CCACGAGCGCGA TCTCC TCGTGCTCGTGG TTCTTGTCGAGGTCC BRADO3414 3604846 - 3604385 - | hypothetical protein BRADO3416 3605164 - 3605442 + | hypothetical protein TERM 2408 3605465 - 3605516 + F 78 -15 -3.10522 | ACGCCCCGAGCGTTC TCGACGACGCGCCGCCGGTCGG CACCAGCA CCGACCCGCGGCGCCATGCCGA TCTCTTCGATGACAT TERM 2409 3606055 - 3606113 + G 73 -13 -3.27475 | gap 1, overlap 3606057 3606058 3606060 GTCGGCCGACGGCAA GCCCACCGGCGATGC-CGGCGACGCGC TTGCGC GCGCGTTCCCGCGCTTCGCCGATGATC TGTTGTGGTGGACCG TERM 2410 3606057 - 3606111 + G 73 -14.2 -3.20322 | gap 1, overlap 3606055 3606058 3606060 CGGCCGACGGCAAGC CCACCGGCGATGC-CGGCGACGCGC TTGCGC GCGCGTTCCCGCGCTTCGCCGATGA TCTGTTGTGGTGGAC TERM 2411 3606058 - 3606110 + G 85 -17.7 -2.51872 | gap 1, overlap 3606057 3606055 3606060 GGCCGACGGCAAGCC CACCGGCGATGC-CGGCGACGCGC TTGCGC GCGCGTTCCCGCGCTTCGCCGATG ATCTGTTGTGGTGGA TERM 2412 3606060 - 3606108 + G 72 -14.5 -2.7924 | gap 1, overlap 3606058 3606057 3606055 CCGACGGCAAGCCCA CCGGCGATGC-CGGCGACGCGC TTGCGC GCGCGTTCCCGCGCTTCGCCGA TGATCTGTTGTGGTG BRADO3417 3605582 - 3606172 + | putative NADPH-dependent FMN reductase TERM 2413 3606217 - 3606194 - T 76 -13.8 -3.13403 | opp_overlap 3606190 3606209, overlap 3606192 GTCCGGCGAGGAAGA GCCGGAGCAC GCGA GAGCTCCGGC TGAATGGTTCAGCGC BRADO3418 3606477 - 3606226 - | hypothetical protein BRADO3419 3606866 - 3607753 + | LysR family transcriptional regulator gabT 3607870 - 3609171 + | 4-aminobutyrate aminotransferase ((S)-3-amino-2-methylpropionate transaminase) BRADO3421 3609204 - 3610502 + | acetylornithine deacetylase TERM 2414 3611389 - 3611414 + G 74 -14.7 -3.04792 | gap 1, opp_overlap 3611386 3611387 GGTCGCCGAGAACGC GCGGC-GGCTGC TGA GCGGCCAGCCGC TGTTGAACGTGGTCG BRADO3422 3610499 - 3611449 + | putative 2-hydroxyacid dehydrogenase family protein. BRADO3423 3611863 - 3611465 - | hypothetical protein BRADO3424 3612135 - 3611974 - | hypothetical protein BRADO3425 3612383 - 3612150 - | hypothetical protein BRADO3426 3612605 - 3612787 + | hypothetical protein BRADO3427 3613007 - 3613891 + | hypothetical protein BRADO3428 3613881 - 3614282 + | putative cytochrome c region BRADO3429 3614622 - 3615458 + | hypothetical protein BRADO3430 3616129 - 3615455 - | putative haloacid dehalogenase-like hydrolase family protein TERM 2415 3616015 - 3616047 + g 70 -13.6 -3.01712 | gap 2 GATGGATGCGCCAGA CCGACAGCTCGATGCT TTC AGCATCGAGC-G-CGG TCTTCCACGCCAGCA BRADO3431 3616700 - 3616314 - | hypothetical protein TERM 2416 3616802 - 3616778 - R 70 -12.1 -3.18452 | opp_overlap 3616800 ATGAGGGCAATGCAA CACGCCGCGAT TTG ATCGCGTCGCG GGTCCGGCTATTTGC BRADO3432 3617016 - 3616810 - | hypothetical protein BRADO3433 3618077 - 3617151 - | hypothetical protein TERM 2417 3617370 - 3617416 + g 70 -9.9 -3.66874 | opp_overlap 3617385, overlap 3617371 3617381 GATCGTCTGCCCGAT CGCCTGCGGATCGAACGGCCG CGCCT CGGCCGTACGTTCGGTCGGCC TTTCGCTCGGCTTGG TERM 2418 3617602 - 3617640 + g 75 -14.4 -3.23853 | overlap 3617600 3617604 3617619 CCGATTGCGCCGGTC GCCGGCTCCTGCGCCGGC GCG GCTGCCGCAGCGGCCGTC TCTTGATTCGAGACG TERM 2419 3617604 - 3617638 + g 78 -15.6 -3.18366 | overlap 3617602 3617600 3617619 GATTGCGCCGGTCGC CGGCTCCTGCGCCGGC GCG GCTGCCGCAGCGGCCG TCTCTTGATTCGAGA TERM 2420 3618295 - 3618323 + r 70 -11.7 -3.17051 | overlap 3618293 3618296 3618315 GATACCGGTAGTCCC GCGTGCTCATACG TTA CGTATGTGCACGA TGTTGGTCGTGAACG TERM 2421 3618296 - 3618322 + r 76 -15.2 -2.50016 | overlap 3618295 3618293 3618315 ATACCGGTAGTCCCG CGTGCTCATACG TTA CGTATGTGCACG ATGTTGGTCGTGAAC TERM 2422 3618560 - 3618574 + r 83 -7.8 -4.60041 | ATGCCGGATGGTATT TGGCGG ACT CTGCCA TTTTTGCCGATCGCT BRADO3434 3620697 - 3618589 - | histidine kinase TERM 2423 3619379 - 3619334 - G 78 -13.9 -3.58343 | CTGACGATGCGGAAA TCGAAGCTGTCGCGCTCGCCC CGCC GGGCGCGCTCGAGACCCTCGA GAGCCCGCGCGCGAT TERM 2424 3620108 - 3620096 - G 71 -9.1 -3.85698 | GCCTCGGCCCAGAAA TGCGC CAT GCGCA GATACGCCAGGAAGC BRADO3435 3621462 - 3620725 - | CRP/FNR family transcriptional regulator BRADO3436 3621761 - 3623836 + | putative methyl-accepting chemotaxis receptor/sensory transducer protein TERM 2425 3623904 - 3623865 - T 93 -19.4 -3.32343 | gap 1, opp_overlap 3623872, overlap 3623866 GCGATATCTTCAGAA CG-CGAGAGCGCCGGACTT TCG AGGTCCGGCGCTCTCGTCA CGTCAAAGACGGGTA TERM 2426 3623902 - 3623866 - T 91 -20.9 -2.59191 | opp_overlap 3623872, overlap 3623865 CGATATCTTCAGAAC GCGAGAGCGCCGGACTT TCG AGGTCCGGCGCTCTCGT CACGTCAAAGACGGG TERM 2427 3623872 - 3623896 + T 86 -17.9 -2.79796 | opp_overlap 3623866 3623865 CTTCAGAACGCGAGA GCGCCGGACTT TCG AGGTCCGGCGC TCTCGTCACGTCAAA BRADO3437 3624464 - 3623931 - | hypothetical protein BRADO3438 3625287 - 3624490 - | hypothetical protein BRADO3439 3625608 - 3625399 - | hypothetical protein BRADO3440 3627307 - 3625967 - | putative glucose/sorbosone dehydrogenase; putative peptide signal BRADO3441 3627768 - 3627304 - | hypothetical protein TERM 2428 3627867 - 3627887 + H 72 -7.5 -4.19238 | overlap 3627868 CGCGGCGGCCTTCGG TCTGAGCAG GAG CTGCCCAGG TTTTCCGATTGCAAA BRADO3442 3627970 - 3628521 + | hypothetical protein BRADO3443 3628999 - 3628547 - | hypothetical protein hbdA 3629294 - 3630145 + | 3-hydroxybutyryl-CoA dehydrogenase BRADO3448 3630919 - 3631218 + | putative signal peptide TERM 2429 3631294 - 3631340 + G 73 -13.7 -3.09273 | gap 1, overlap 3631299 TGGTATCTCGGATTC TGGCTGATCGCCGGCCCGTGCG GTGT TGCACAGGCCGG-GGTCGGCGA TCTCTATTCCGCACA TERM 2430 3631299 - 3631342 + G 72 -13.8 -3.06696 | gap 1, overlap 3631294 TCTCGGATTCTGGCT GATCGCCGGCC-CGTGCGGTG TTG CACAGGCCGGGGTCGGCGATC TCTATTCCGCACAGA BRADO3449 3631222 - 3632061 + | putative signal peptide TERM 2431 3632825 - 3632781 - g 71 -12.2 -3.30124 | gap 3, overlap 3632782 CGTCATGGCCCAGAA CCCGCCAGCGCC--GGCCACG GCTCCG CGTGGCCCTGGCGC-GGCCGG TGTCGCGGCCGCCCC BRADO3450 3632362 - 3633099 + | hypothetical protein BRADO3451 3633215 - 3633958 + | putative signal peptide BRADO3452 3634129 - 3634563 + | hypothetical protein BRADO3453 3634822 - 3634592 - | hypothetical protein BRADO3454 3635258 - 3635043 - | hypothetical protein BRADO3455 3635724 - 3636695 + | putative glyoxalase/Bleomycin resistance protein/dihydroxybiphenyl dioxygenase superfamily protein BRADO3456 3636926 - 3636735 - | hypothetical protein BRADO3457 3637337 - 3636990 - | putative Zn-ribbon-containing protein involved in phosphonate metabolism, PhnA-like protein. TERM 2432 3637447 - 3637421 - R 71 -13 -3.09452 | opp_overlap 3637419 3637420, overlap 3637423 ATCCCGGAAGAGAGA CAGCGCGCAG TCTTTTG CCGCGCGCTG CTGATGTCGACTTGA BRADO3458 3637769 - 3637485 - | hypothetical protein BRADO3459 3637979 - 3639688 + | putative acyl-CoA dehydrogenase. BRADO3460 3640505 - 3639729 - | putative signal peptide TERM 2433 3640498 - 3640541 + g 83 -13 -3.86346 | gap 1 AGCTTCGCCGCTTTG CGCCGCATCGCGCGCC-AGCG TCC CGCTCGGCGCGGCCTGCGGGG TTTCTGCAGCGATGG TERM 2434 3642057 - 3642034 - g 71 -13.8 -2.80935 | AGTCCACCGAGCAGA CCGCGGCGGT GGCC AGCGCCGCGG AGACCGCGACCAGCA BRADO3461 3640671 - 3642740 + | putative methyl-accepting chemotaxis receptor/sensory transducer protein. BRADO3464 3643651 - 3643884 + | hypothetical protein TERM 2435 3643944 - 3643926 - T 75 -11.6 -3.53811 | CGGAGGGTGGGCAAA GCGGCGCC GCA GGCGGCGC GTGCCCACCGGCGCT TERM 2436 3644215 - 3644197 - T 75 -11.6 -3.53811 | CGTAGGGTGGGCAAA GCGGCGCC GCA GGCGGCGC GTGCCCACCGGCGCT BRADO3465 3645782 - 3644457 - | putative signal peptide TERM 2437 3645887 - 3645868 - R 70 -10.6 -3.53811 | CGTAGGGTGGGCAAA GCGGCGCC GTCA GGCGGCGC GTGCCCACCTGCGGT BRADO3466 3647273 - 3646113 - | putative cytochrome P450 TERM 2438 3646809 - 3646764 - G 71 -9 -3.76048 | gap 2, overlap 3646765 3646790 GTCGAACCAATAGAA GGCGAGGCTGCGCAGCTGTCCG AACA CGG-CAT-TGCGCAGCGTCGCG ATGGCGCCCTGGCCG BRADO3468 3648001 - 3647756 - | hypothetical protein BRADO3469 3648085 - 3648570 + | hypothetical protein BRADO3470 3648967 - 3648599 - | hypothetical protein BRADO3471 3649432 - 3649109 - | hypothetical protein TERM 2439 3649519 - 3649483 - R 81 -15.2 -3.05384 | opp_overlap 3649501, overlap 3649465 3649464 GGGCGCGTTAGCGAA GCGTAACGCGCCGCTC CGGTC AAGCGGCGGATTACGC TCCGCTAATCCGCCC BRADO3472 3650168 - 3649524 - | hypothetical protein BRADO3474 3650751 - 3651167 + | hypothetical protein TERM 2440 3651264 - 3651234 - T 100 -18.4 -3.727 | opp_overlap 3651240 3651258, overlap 3651240 GGTACGACAGTGAAA CAAAAAGCCCCGCA GCT TGCGGGGCTTTCCG ATTCATCGGAGAGTT TERM 2441 3651258 - 3651240 - T 100 -16 -5.31519 | opp_overlap 3651240, overlap 3651234 ACAGTGAAACAAAAA GCCCCGCA GCT TGCGGGGC TTTCCGATTCATCGG TERM 2442 3651240 - 3651258 + T 91 -16 -3.67976 | opp_overlap 3651234 3651240 ACAGTGAAACAAAAA GCCCCGCA GCT TGCGGGGC TTTCCGATTCATCGG TERM 2443 3651258 - 3651277 + T 73 -8.6 -4.04474 | opp_overlap 3651234 CCGCAGCTTGCGGGG CTTTCCGA TTCA TCGGAGAG TTTCTGTCACAATCT nrd 3655062 - 3651292 - | ribonucleotide-diphosphate reductase subunit alpha TERM 2444 3652439 - 3652429 - G 72 -8.2 -4.03234 | overlap 3652430 CGCGCCCGAGATAAA CGGC TGC GCCG CCGCCATCATGCGGA TERM 2445 3653703 - 3653734 + g 95 -16.7 -4.08216 | gap 1 TGAAGTGCAGGCCGG GATCGGCCGACGCC CAGGC GGCGT-GGCCGATC TTTTCCCAGAGGTCC TERM 2446 3654012 - 3654028 + g 71 -9.3 -3.79906 | overlap 3653985 GCGCGAGCTTGATCT CGCGGCG GAG CGCCGGG TTCTTCTCGGGGTCG BRADO3476 3655687 - 3656655 + | DMT family permease BRADO3477 3658909 - 3656660 - | sensor histidine kinase BRADO3478 3661467 - 3659182 - | sensor histidine kinase TERM 2447 3660203 - 3660238 + g 73 -14.6 -2.90212 | gap 1 CGGTCTGCGGCCTGG CCGATCAGC-GCGGCGG TGG CCGCCGCGGCCGGACGG TCTCTCACCTCGTCG TERM 2448 3660306 - 3660343 + g 85 -13.3 -4.12188 | overlap 3660338 TGTTGTTGAAGTCGT GCGCGACGCCGCCGGTG AGCT TGCCGATGGCGTCGAGC TTTTGCGCCTGCTGG TERM 2449 3661891 - 3661919 + r 95 -15.4 -4.00042 | gap 1, opp_overlap 3661890 3661887 ATGACACTAAATTAG GAGGCGGCG-AGT CATC ACTTCGCCGCCTC TTGTTTCATCGCACG BRADO3479 3662474 - 3661950 - | hypothetical protein BRADO3480 3662857 - 3663267 + | NADH dehydrogenase TERM 2450 3663298 - 3663320 + T 100 -18.4 -3.65046 | opp_overlap 3663289 GAATGAGGTTTGAGA GGCCGTCCGG GCT CCGGGCGGCC TTCTTGCGATGGGCG BRADO3481 3664049 - 3663354 - | putative DJ-1/PfpI family protein BRADO3482 3664162 - 3665109 + | bifunctional transcriptional regulator/glutamine amidotransferase-like domain-containing protein BRADO3483 3665182 - 3666258 + | hypothetical protein BRADO3484 3666265 - 3667824 + | hypothetical protein TERM 2451 3668326 - 3668361 + G 75 -15.4 -2.79501 | gap 1, opp_overlap 3668315, overlap 3668357 CGAACTCGCCCGCGC CGCGCTGCC-CGATCTG TTG CAGAGCGCGGCTGCGCG TGTCGTCGCGATCTC BRADO3485 3667955 - 3668713 + | putative dehdyrogenase BRADO3486 3668735 - 3669985 + | putative D-amino-acid dehydrogenase, FAD dependent TERM 2452 3670279 - 3670327 + G 71 -9.6 -3.85817 | gap 2, opp_overlap 3670279, overlap 3670280 TGATCGGCATCAACA TCCCCGCGCATGTCGCGGCGGTCA CAG TG-CTGTCGCTATATG-GCGGGGC TTTCTACGCCGAGAT BRADO3487 3670017 - 3670685 + | amino acid ABC transporter membrane protein TERM 2453 3670763 - 3670720 - T 84 -16.2 -3.06183 | gap 1, opp_overlap 3670725 3670729, overlap 3670725 3670729 GTCATTGCGAGCGAA GCGAAGCAATCCAGGGCTGCA ACC TG-AGCTCTGGATTGCTTCGT CGCTACGCGCCTCGC TERM 2454 3670725 - 3670758 + T 83 -15.5 -3.18264 | gap 1, opp_overlap 3670720 3670725 3670729, overlap 3670729 TGCGAGCGAAGCGAA GCAATCCAGGGCTGCA ACC TG-AGCTCTGGATTGC TTCGTCGCTACGCGC TERM 2455 3670758 - 3670725 - T 73 -13.3 -3.19192 | gap 1, opp_overlap 3670725 3670729, overlap 3670720 3670729 TGCGAGCGAAGCGAA GCAATCCAGGGCTGCA ACC TG-AGCTCTGGATTGC TTCGTCGCTACGCGC BRADO3488 3671639 - 3670806 - | putative signal peptide BRADO3489 3672819 - 3671806 - | hypothetical protein TERM 2456 3671905 - 3671884 - G 74 -12.3 -3.53224 | gap 1 CAGCCGCTCGGCAAA CG-GCCGCAG CAG CTGCGGCGCG AGGTGAATCGGAAAC TERM 2457 3672892 - 3672862 - R 100 -19.1 -3.63515 | opp_overlap 3672865, overlap 3672865 GGCGAGGTGGAACAA GAACGCGCGACCA TGCGT TGGCCGCGCGTTC CTGCAAAGTCACATC TERM 2458 3672865 - 3672889 + r 73 -12.8 -3.14931 | opp_overlap 3672865 3672862 GAGGTGGAACAAGAA CGCGCGACCA TGCGT TGGCCGCGCG TTCCTGCAAAGTCAC TERM 2459 3672889 - 3672865 - R 89 -15 -3.95324 | opp_overlap 3672865, overlap 3672862 GAGGTGGAACAAGAA CGCGCGACCA TGCGT TGGCCGCGCG TTCCTGCAAAGTCAC BRADO3490 3674009 - 3672945 - | hypothetical protein TERM 2460 3673409 - 3673434 + g 70 -10.3 -3.70546 | overlap 3673404 TGACTGCGTCGATGT CGCGCTCCAGC TCGC GCAGCAGCGCG TTATGCTTTTCGTCG BRADO3491 3674854 - 3674243 - | hypothetical protein TERM 2461 3674726 - 3674753 + g 78 -14.9 -3.2794 | opp_overlap 3674722 3674720 3674717 CAGCAAGGACAGTCC GGCGGTGCTGC CGACCA GCAGCACCGTC TTGCTGTAGATCAGC BRADO3492 3676041 - 3674875 - | aromatic amino acid aminotransferase TERM 2462 3675479 - 3675508 + g 71 -12.2 -3.28712 | gap 2 GTGATGCGCGCCCAG TCCG-C-GGCGCCC AATG GGGCGCCGGTCGGA TTGTGGCAGGACGCA TERM 2463 3675696 - 3675651 - G 79 -8.1 -4.56597 | gap 1, opp_overlap 3675640, overlap 3675652 CGGCCGCGGCAAAAA TGCCGG-CGTGGTTGGGCCAGC TCG GCAAGCCCAGCCAGATCCGGCC GGTGCCCGCCTGGCG BRADO3493 3677223 - 3676216 - | putative lipase/esterase BRADO3494 3677996 - 3677223 - | levodione reductase TERM 2464 3679108 - 3679077 - g 91 -11.4 -4.25104 | overlap 3679049 CGCGCCGGAGCAAAA GCCCGCGCCGCAGC CGCA GCCGCAGCCCGCGC AAAAGCGCCCGCCGC TERM 2465 3679162 - 3679113 - g 72 -8.3 -4.08216 | gap 1, overlap 3679131 3679134 GCAGCCCGCGCAAAA GCGCCCGCCGCAGCAGAAGCAGGC TGC GCC-GCGTCCGCCCGGGCCGCCGC CGCAATACCAGACCC BRADO3495 3678277 - 3679242 + | putative signal peptide aat 3679930 - 3679250 - | leucyl/phenylalanyl-tRNA--protein transferase BRADO3497 3681077 - 3679989 - | signal transduction histidine kinase TERM 2466 3680653 - 3680597 - G 73 -14.3 -3.16191 | gap 1 CGACACGGTGATTAA CCTCGCGCAGCAGCACCTCG-CGCTC CGCGGC GAGCGCCGCGAAGCGGTCGCGCGAGG CACGGACCTCGGCCT BRADO3498 3681511 - 3681074 - | putative two-component response regulator/receiver (CheY-like protein) BRADO3499 3683028 - 3681508 - | putative two-component sensor histidine kinase TERM 2467 3682988 - 3682969 - G 77 -10 -4.00038 | overlap 3682986 GACCAGCACCAGAAA TCCCGCTG ACAA CAGCAGGA CCTGGCCCAGTGTGC accC 3684496 - 3683147 - | acetyl-CoA carboxylase biotin carboxylase subunit TERM 2468 3684573 - 3684515 - R 86 -16.2 -3.20723 | GTCCTACGAAGCGAA TGGCGAATGGCGAATGGCGAGTAG GGAAGCAGCGA CCATTCGCTACTCGCCATTCGCCA CTCGCCCCTACTCGA accB 3685060 - 3684581 - | acetyl-CoA carboxylase, biotin carboxyl carrier protein subunit BRADO3502 3685484 - 3685104 - | putative 3-dehydroquinate dehydratase type 2 TERM 2469 3685674 - 3685697 + r 100 -18.2 -4.03413 | opp_overlap 3685674 GCCCGGCAGCATGAA GGGGCGGACA TTGC TGTCCGCCCC TTTGTCTCAGCACCT TERM 2470 3685697 - 3685674 - R 91 -18.2 -3.21099 | opp_overlap 3685674 GCCCGGCAGCATGAA GGGGCGGACA TTGC TGTCCGCCCC TTTGTCTCAGCACCT BRADO3503 3686345 - 3685725 - | hypothetical protein TERM 2471 3686630 - 3686617 - R 71 -5.2 -4.46212 | TGCTGCATGACAAAA GCGG GACCAA CCGC GAGAGACCGTGTGTT BRADO3504 3687757 - 3686654 - | putative citrate utilization protein B (citB); putative membrane protein TERM 2472 3687436 - 3687414 - G 79 -11.2 -4.00526 | overlap 3687401 3687415 AAGCCGAGAATGAAA GCGGCCATGC TCA GCACGGCCGT GAGCGCGATCGCCAG TERM 2473 3687435 - 3687415 - G 74 -14.7 -2.99593 | overlap 3687401 3687414 AGCCGAGAATGAAAG CGGCCATGC TCA GCACGGCCG TGAGCGCGATCGCCA TERM 2474 3687707 - 3687730 + g 72 -13.2 -3.08133 | opp_overlap 3687705 ATAGCGGCAGGAATT GCAGATCGTC ATCA GGCGATCTGC TTCGGTCAATGCCTC BRADO3505 3689159 - 3687744 - | tricarballylate dehydrogenase TERM 2475 3689037 - 3689019 - G 77 -7.4 -4.36914 | overlap 3689021 GCCGCCGCGATAAAA TTTCGAGG CGG CCTCGACA ACGATCACTGACGCG BRADO3506 3689309 - 3689962 + | GntR family transcriptional regulator TERM 2476 3689995 - 3690029 + T 76 -12.8 -3.53444 | opp_overlap 3689996 3690002, overlap 3690002 CCGTCCGCCGAGCAA ACAAAAAGGCCGGCTG ATG CAGCCGGCCTTCGTGG TTTGCGGCGCGATCC TERM 2477 3690028 - 3689996 - T 100 -18.5 -3.72576 | opp_overlap 3689995 3690002, overlap 3690002 CGTCCGCCGAGCAAA CAAAAAGGCCGGCTG ATG CAGCCGGCCTTCGTG GTTTGCGGCGCGATC TERM 2478 3690002 - 3690022 + T 93 -18.3 -3.32769 | opp_overlap 3690002 3689996, overlap 3689995 CCGAGCAAACAAAAA GGCCGGCTG ATG CAGCCGGCC TTCGTGGTTTGCGGC TERM 2479 3690022 - 3690002 - T 100 -18.3 -5.33405 | opp_overlap 3689995 3690002, overlap 3689996 CCGAGCAAACAAAAA GGCCGGCTG ATG CAGCCGGCC TTCGTGGTTTGCGGC BRADO3507 3690838 - 3690053 - | putative outer membrane protein BRADO3508 3692311 - 3690914 - | hypothetical protein TERM 2480 3691735 - 3691751 + g 70 -11.5 -3.45023 | CGGTCAGGAATTTGA CGCCGGC ACG GTCGGCG TTCTCCTCCTGCTGA BRADO3509 3692490 - 3693689 + | putative aminotransferase TERM 2481 3694898 - 3694875 - g 78 -13.8 -3.57263 | opp_overlap 3694878 3694896 ATGCTGACCTCGAAA GGCGCCAGCG GCGT CACCGGCGCC GGCTTCATTACGCTG dctA 3693807 - 3695144 + | C4-dicarboxylate transport protein TERM 2482 3695217 - 3695165 - T 95 -19.9 -3.28712 | opp_overlap 3695180, overlap 3695180 3695215 CCCTGCGCCGCAGAA CTCGCCAACGAAAAACGCCCAGCCG CTT CGGCCGGGCGTTTTGCATTGAAGCG CTCGAACGCTGTGAC TERM 2483 3695202 - 3695180 - T 100 -18.4 -4.8622 | opp_overlap 3695180, overlap 3695165 CTCGCCAACGAAAAA CGCCCAGCCG CTT CGGCCGGGCG TTTTGCATTGAAGCG TERM 2484 3695180 - 3695202 + T 100 -16.2 -4.27316 | opp_overlap 3695180 3695165 CTCGCCAACGAAAAA CGCCCAGCCG CTT CGGCCGGGCG TTTTGCATTGAAGCG BRADO3511 3698451 - 3695236 - | putative ribonuclease E TERM 2485 3698702 - 3698720 + H 78 -11.7 -3.68024 | CGTCTGGAATATGTG GGCGGCA GCGAG TGCCGCC TTGTCTCTTGCCGAA BRADO3513 3699344 - 3700600 + | putative N-acetylmuramoyl-L-alanine amidase BRADO3514 3700824 - 3703337 + | putative membrane carboxypeptidase/penicillin-binding protein; putative exported protein BRADO3515 3703567 - 3703334 - | hypothetical protein prfB 3703620 - 3704591 + | peptide chain release factor 2 BRADO3517 3704595 - 3705470 + | dehydrogenase NAD(P)-binding domain-containing protein upp 3706167 - 3705532 - | uracil phosphoribosyltransferase BRADO3519 3707950 - 3706220 - | putative glutathione-regulated potassium-efflux system protein TERM 2486 3706722 - 3706698 - G 79 -8.5 -4.41348 | GCCGTGCGAAAGAAA CCGAGCAGC ACGATCG GCCGCCCGG CGCCATGACCACCGC BRADO3520 3708006 - 3708524 + | hypothetical protein BRADO3522 3709263 - 3710525 + | hypothetical protein BRADO3523 3711978 - 3710542 - | transcriptional regulator BRADO3524 3712086 - 3713228 + | putative aminotransferase TERM 2487 3713896 - 3713934 + G 71 -3 -4.63218 | gap 1, overlap 3713922 CCGCGAAGGTGCGCG GCGTGCTCAC-CGGCTG CGACAA CACCTGGGCGAGCCCGC TTTTGTTCAAGCCGC BRADO3525 3713379 - 3714560 + | putative cystathionine beta-lyase (CBL; Beta-cystathionase; cysteine lyase) BRADO3526 3714662 - 3715945 + | hypothetical protein BRADO3527 3716754 - 3716005 - | hypothetical protein TERM 2488 3716378 - 3716368 - G 79 -4.6 -4.7173 | overlap 3716370 CAGCACACCGAAAAA CGCC AGC AGCG CGAGGCCGCCACCGA BRADO3528 3718091 - 3716865 - | putative metalloendopeptidase TERM 2489 3718049 - 3717991 - G 74 -8.1 -4.27316 | overlap 3717993 TCGCGGAACGCAAAA TAGGTCGCGGTCGCCGCCGACCAG-ATGC CGA GCAGGCTGA-CGGTGCCGACCACGATCCA GAACACGACCGGGCC TERM 2490 3718012 - 3717993 - G 70 -10 -3.7398 | gap 1, overlap 3717991 GCGGAACGCAAAATA GGTCG-CGG TCG CCGCCGACC AGATGCCGAGCAGGC BRADO3529 3719066 - 3718338 - | hypothetical protein TERM 2491 3720480 - 3720449 - g 72 -11.7 -3.61715 | GATCGGCCTGAAGAA CG-GCTCGCTGGTCG TCGA CGACCAGC-AGCGCG GCAACAAATGGACGT BRADO3530 3719568 - 3723266 + | hypothetical protein BRADO3531 3724535 - 3723279 - | hypothetical protein TERM 2492 3724217 - 3724196 - G 79 -12.9 -3.63968 | GCTGAAATTGCCAAA GCGCCCGCG CATG CGCGGCCGC GGTGAAGGCCGAGCC TERM 2493 3724464 - 3724492 + g 74 -10.1 -3.76492 | opp_overlap 3724448 3724464, overlap 3724469 CCCGAGCACGACGAA CCCCACGCGCGCC CGC GGCGGGCTTGCGG TTTCCTCGGCTTGCG tyrS 3725845 - 3724592 - | tyrosyl-tRNA synthetase TERM 2494 3724805 - 3724831 + g 77 -13 -3.56099 | overlap 3724817 CACGCCGAGACCGGC GTCGAGCTCGCT CCT GGCGACCTCGAC TTTCGGCAGGTTCTC TERM 2495 3725104 - 3725136 + g 72 -14.1 -3.01712 | overlap 3725113 TGCACTGGTCGGCAT TGAGCCAGATCGCGC CCT GCGCGGTCTTGCCCA TCTTGGCGCCGGAGG anmK 3726043 - 3727146 + | anhydro-N-acetylmuramic acid kinase BRADO3534 3727228 - 3727905 + | putative glutathione S-transferase BRADO3535 3728923 - 3728276 - | hypothetical protein BRADO3536 3730088 - 3729171 - | hypothetical protein TERM 2496 3730082 - 3730053 - G 72 -5.7 -4.36914 | overlap 3730055 CGTGGTCGCATAAAA GATCCGATCATTC GGAC GCAGGATCAGATC AGTCATCTTGCTCAT BRADO3537 3730140 - 3730316 + | hypothetical protein BRADO3538 3730488 - 3731687 + | hypothetical protein nifS 3731738 - 3732901 + | cysteine desulfurase sufB 3732986 - 3734482 + | cysteine desulfurase activator complex subunit SufB TERM 2497 3734668 - 3734656 - g 75 -3.3 -4.71828 | ATTGCAGCAATAAAA GTTCG GCT CGACC GCATTGAAAAGCGTC BRADO3541 3734482 - 3734712 + | hypothetical protein sufC 3734716 - 3735468 + | SufC, related to ABC transporter associated with Fe-S cluster assembly ATP-binding protein TERM 2498 3735565 - 3735511 - g 72 -11.4 -3.61517 | gap 3, opp_overlap 3735541 3735543, overlap 3735512 3735514 AGCTCTGGTCAAGAA CGACAG-CGGTCCGGCGGCGAGCAGCG TGTT CGCTGC-CGCC-CAGGGCCGGCTGCCC GGCGCCGGCAAGGTT TERM 2499 3735564 - 3735512 - g 72 -14.9 -2.76696 | gap 3, opp_overlap 3735541 3735543, overlap 3735511 3735514 GCTCTGGTCAAGAAC GACAG-CGGTCCGGCGGCGAGCAGCG TGTT CGCTGC-CGCC-CAGGGCCGGCTGCC CGGCGCCGGCAAGGT TERM 2500 3735562 - 3735514 - g 71 -13.9 -2.93073 | gap 3, opp_overlap 3735541 3735543, overlap 3735512 3735511 TCTGGTCAAGAACGA CAG-CGGTCCGGCGGCGAGCAGCG TGTT CGCTGC-CGCC-CAGGGCCGGCTG CCCGGCGCCGGCAAG sufD 3735488 - 3736810 + | sufD, needed for fhuF Fe-S center production/stability sufS 3736807 - 3738054 + | cysteine desulfurase BRADO3545 3738051 - 3738422 + | hypothetical protein BRADO3546 3738484 - 3738873 + | Iron-sulfur cluster assembly protein BRADO3547 3738994 - 3739530 + | hypothetical protein TERM 2501 3739578 - 3739534 - T 73 -8.4 -4.07885 | opp_overlap 3739542 CAGGCGCGGTGAAAA GCCTAATCGCCGGACGAACG GCTTG CTTGCGTCAGGCGACCTGGC CGCGCGTCGCTGTCG BRADO3548 3740632 - 3739565 - | hypothetical protein TERM 2502 3740947 - 3740989 + r 78 -10.4 -4.07568 | opp_overlap 3740951 3740967, overlap 3740948 GGACGGCGCGCGCCA ACGAGGCTCCGGGCAACTCA CCC TGAGTAGCCGGGAGCCCGGG TTTTCAAGGCAGCGG TERM 2503 3740948 - 3740988 + r 75 -13.9 -3.04398 | opp_overlap 3740951 3740967, overlap 3740947 GACGGCGCGCGCCAA CGAGGCTCCGGGCAACTCA CCC TGAGTAGCCGGGAGCCCGG GTTTTCAAGGCAGCG TERM 2504 3740985 - 3740951 - R 87 -18.6 -2.70932 | opp_overlap 3740948 3740947, overlap 3740967 GGCGCGCGCCAACGA GGCTCCGGGCAACTCA CCC TGAGTAGCCGGGAGCC CGGGTTTTCAAGGCA BRADO3549 3742423 - 3740993 - | putative ATP-dependent RNA helicase BRADO3550 3742742 - 3743329 + | hypothetical protein BRADO3551 3743419 - 3744918 + | hypothetical protein BRADO3552 3745695 - 3744928 - | putative 2-deoxy-D-gluconate 3-dehydrogenase (2-keto-3-deoxygluconate oxidoreductase) BRADO3553 3745911 - 3745726 - | hypothetical protein TERM 2505 3745861 - 3745813 - G 72 -13.2 -3.21099 | TTGGTTGATCATGAA GCTCGTGCG-CGGCCAGGCCACCA CGC CGGTGCCCTGGCCGACCCA-GAAC AGGCCGACAGCAAGC TERM 2506 3746066 - 3746048 - R 100 -13.1 -5.61881 | opp_overlap 3746048 GGCCAAAAATAAAAA GCCCCGG ATACA CCGGGGC TTTTCGCAGTGACAT TERM 2507 3746048 - 3746066 + r 89 -13.1 -4.11394 | opp_overlap 3746048 GGCCAAAAATAAAAA GCCCCGG ATACA CCGGGGC TTTTCGCAGTGACAT BRADO3554 3746913 - 3746134 - | putative outer-membrane immunogenic protein precursor; putative exported protein TERM 2508 3747126 - 3747098 - R 100 -13.2 -5.86976 | gap 1 TTATAAAAGAAAAAA GCAGGC-CCACGC GAAC GCGTGGAACCTGC AATCGATACGAGACA parE 3749229 - 3747154 - | DNA topoisomerase IV subunit B TERM 2509 3748138 - 3748096 - G 84 -17 -3.14132 | opp_overlap 3748095 3748092 3748107, overlap 3748098 CGGCTCGCGCACGAA CACCGAGAGCATGATGGCGG CGC CCGCCATGATGTCCTCGGAG GTGATGTTGGCCGAG TERM 2510 3748136 - 3748098 - G 86 -18.2 -3.13403 | opp_overlap 3748095 3748092 3748107, overlap 3748096 GCTCGCGCACGAACA CCGAGAGCATGATGGCGG CGC CCGCCATGATGTCCTCGG AGGTGATGTTGGCCG BRADO3556 3749501 - 3750031 + | hypothetical protein BRADO3557 3750265 - 3750915 + | hypothetical protein argC 3750927 - 3751916 + | N-acetyl-gamma-glutamyl-phosphate reductase BRADO3559 3751981 - 3753219 + | threonine dehydratase BRADO3560 3753258 - 3754385 + | putative RNA ligase TERM 2511 3754441 - 3754459 + F 90 -2.2 -5.45652 | overlap 3754442 3754443 GCTCGCCTCGTCGCC CGGCGGCG TCC CGCTTCCC TTTTTTGTTCCGAAT TERM 2512 3755035 - 3755020 - g 70 -8.2 -3.91897 | GCTTTCACCGACAAA GGCCGC GTCT ACGGCC TGCCGATCGCACTCT BRADO3561 3754639 - 3755898 + | putative ABC sugar transporter (substrate binding protein); putative exported protein BRADO3562 3755900 - 3756841 + | putative ABC transporter (permease protein); putative membrane protein BRADO3563 3756834 - 3757682 + | putative sugar ABC transporter (permease protein); putative exported protein TERM 2513 3758051 - 3758072 + G 70 -2.2 -4.63218 | gap 1, opp_overlap 3758047, overlap 3758053 CGCAAAAAAATCTGC GCGT-CGGC TGCGC GCCGGACAC TTTTCTTGGCGGCGG TERM 2514 3758113 - 3758151 + G 75 -4.3 -4.64766 | overlap 3758106 GCGCGCAAGCTGATC GACGATGGCGCCATCGG AGCGC CCGTCGCCGGCAGCGTC TTTTTCGGCTGTCCG BRADO3564 3757705 - 3758802 + | putative dehydrogenase/oxidoreductase TERM 2515 3759023 - 3759007 - g 76 -8.7 -4.28254 | overlap 3759008 GTCGAAGATCGAAAA GGCTGAG GCT CTCAACC TCTGCGCGGCGGTAC BRADO3565 3758813 - 3759457 + | hypothetical protein BRADO3566 3759454 - 3760503 + | LacI family transcriptional regulator BRADO3567 3760905 - 3760507 - | hypothetical protein TERM 2516 3760926 - 3760952 + r 85 -15.8 -3.44319 | opp_overlap 3760924 TCCCCTCAACTGATT CCGTCCCGTCCC GGC GGGACGGAGCGG TTATAGTCAATTGCG phbC 3762783 - 3760978 - | Poly-beta-hydroxybutyrate polymerase TERM 2517 3762731 - 3762746 + g 89 -3.2 -5.31456 | overlap 3762719 3762732 ATATTCGTCGCGAAG GCTTCG GCGT CGAAGG TTTTTTGTGGATTGG BRADO3570 3763134 - 3763322 + | hypothetical protein TERM 2518 3764150 - 3764170 + G 73 -11.1 -3.63744 | overlap 3764148 ATCCTGATCCTGTCC GACCTCGCC TAC GCCGAGGTC TATTTTGACGACAAC BRADO3571 3763541 - 3764761 + | aminotransferase TERM 2519 3764827 - 3764855 + G 82 -16.7 -3.29471 | overlap 3764828 3764830 GAGAGTGGGCATCGC GGGCCTCGGCACC GTG GGTGCCGAGGTCG TTCGTCTGATCGAGC TERM 2520 3764828 - 3764854 + G 95 -20.2 -2.57468 | overlap 3764827 3764830 AGAGTGGGCATCGCG GGCCTCGGCACC GTG GGTGCCGAGGTC GTTCGTCTGATCGAG TERM 2521 3764830 - 3764852 + G 95 -19.2 -2.82519 | overlap 3764828 3764827 AGTGGGCATCGCGGG CCTCGGCACC GTG GGTGCCGAGG TCGTTCGTCTGATCG TERM 2522 3765433 - 3765415 - g 78 -14.6 -3.30771 | CGACACCGCGCAGAA GCTCGCGA TCC TCGCGAGC CTCGCCTTCGGCACC hom 3764798 - 3766114 + | homoserine dehydrogenase TERM 2523 3766168 - 3766152 - f 71 -10.9 -3.53012 | TTGTCCCTGCTCAAA CAAACGC GTG GCGTTTG GGCTAGGTTCATGCT glpX 3766319 - 3767320 + | fructose 1,6-bisphosphatase II TERM 2524 3767846 - 3767815 - g 73 -12.2 -3.44051 | opp_overlap 3767837 GTTTCAGCACTACAA GCCCGACCCCGAGA CCTA TCTCGGCGCCGCGC GCCTCCTTGGTCTTT BRADO3574 3767336 - 3768055 + | putative (S)-2-haloacid dehalogenase IVA (2-haloalkanoic acid dehalogenase IVA) (L-2-haloacid dehalogenase IVA) (halocarboxylic acid halidohydrolase IVA) BRADO3575 3768065 - 3768331 + | hypothetical protein BRADO3576 3769419 - 3768328 - | putative methyl-accepting chemotaxis protein TERM 2525 3769212 - 3769192 - G 72 -11.8 -3.62096 | CGCCACGACGGCAAA GCCGGCGC CTTGC GCGCCGAC CCGCGAGCTCTCGAT TERM 2526 3770420 - 3770435 + G 72 -8.2 -4.07568 | opp_overlap 3770418 GGCGGTCAATCGAGA GCTGCG CAGC CGCGGC TTTTGGAGCGGCACG TERM 2527 3771169 - 3771140 - g 78 -9.9 -4.11216 | gap 1 CGCCTATCTGGAAAA CGCG-CTCGCCGCC GAT GTCGCCGAGGCGCG GCACGTCAACGAGAT BRADO3577 3769716 - 3771557 + | putative single-stranded-DNA-specific exonuclease recJ TERM 2528 3771937 - 3771923 - T 76 -11.4 -3.727 | opp_overlap 3771922 GTCACCACAGGCAAA GCCGGT TCA ACCGGC ATTCCCTGCGCGATG BRADO3578 3772703 - 3772305 - | hypothetical protein BRADO3579 3772934 - 3773725 + | hypothetical protein BRADO3580 3775049 - 3773829 - | putative membrane-bound lytic transglycosylase precursor protein, putative signal peptide TERM 2529 3774254 - 3774216 - G 72 -11.5 -3.53012 | overlap 3774217 GTTCGGTTGCGGAAA CGGCTCGCCGTCGGCGC GGGTG ACGCCGGCGGCCTGCCA GGCCGCGTAGGTCCT BRADO3581 3775631 - 3775101 - | MarR family transcriptional regulator TERM 2530 3775204 - 3775252 + g 71 -14.6 -2.52896 | gap 2 CGCTCCAGCGCAGTC GCCTGGCGCCGCGC--CCGCGT CAGCAGC GCGCGGCCGCGCGGGGTCAGGC TCCATTGCAGCATGC BRADO3582 3775680 - 3776150 + | putative carboxymuconolactone decarboxylase (CMD) family protein BRADO3583 3776210 - 3776392 + | hypothetical protein BRADO3584 3776883 - 3776620 - | hypothetical protein BRADO3585 3778596 - 3776956 - | putative peptidase M23 family protein; putative signal peptide TERM 2531 3778313 - 3778287 - G 100 -20.2 -3.42574 | CGAACGGCAGCAGAA CGGGGACCGGAC TGC GTCCGATCCCCG TGAAGATGGCGGAGG efp 3779214 - 3778648 - | elongation factor P TERM 2532 3779583 - 3779570 - g 70 -2.3 -4.66537 | GGGTCCAACATAAAA GGTAC TTGA GAACC TCTCCGGAGTTTGCC BRADO3587 3779338 - 3780393 + | putative lysyl-tRNA synthetase (lysine--tRNA ligase) BRADO3588 3780390 - 3781484 + | putative lysine 2,3-aminomutase BRADO3589 3781521 - 3781799 + | putative signal peptide TERM 2533 3781804 - 3781840 + T 85 -14.4 -3.61764 | opp_overlap 3781811, overlap 3781806 3781811 GCGGCTGCTGACACC TTGCAAAGCGGCGCGC GCGAG GCGAGCCGCTTTGCTG TTTGAAGCTTGCTAA TERM 2534 3781806 - 3781838 + T 93 -19.2 -3.38581 | opp_overlap 3781811, overlap 3781804 3781811 GGCTGCTGACACCTT GCAAAGCGGCGCGC GCGAG GCGAGCCGCTTTGC TGTTTGAAGCTTGCT TERM 2535 3781811 - 3781833 + T 83 -11.9 -4.00532 | opp_overlap 3781811, overlap 3781806 3781804 CTGACACCTTGCAAA GCGGCGCGC GCGAG GCGAGCCGC TTTGCTGTTTGAAGC TERM 2536 3781833 - 3781811 - T 75 -11.9 -3.56643 | opp_overlap 3781811 3781806 3781804 CTGACACCTTGCAAA GCGGCGCGC GCGAG GCGAGCCGC TTTGCTGTTTGAAGC aroG 3782937 - 3781852 - | phospho-2-dehydro-3-deoxyheptonate aldolase TERM 2537 3783001 - 3782984 - R 100 -12.7 -5.4505 | opp_overlap 3782984 GCCGGCAATAAAAAA GCCGCCA GGTC TGGCGGC TTGTTCGGATATCTT TERM 2538 3782984 - 3783001 + r 77 -12.7 -3.6796 | opp_overlap 3782984 GCCGGCAATAAAAAA GCCGCCA GGTC TGGCGGC TTGTTCGGATATCTT BRADO3591 3783755 - 3783168 - | hypothetical protein BRADO3592 3784909 - 3783881 - | hypothetical protein hemA 3785771 - 3787003 + | 5-aminolevulinate synthase TERM 2539 3787053 - 3787082 + F 76 -7.7 -4.36914 | overlap 3787055 3787058 AGTTTGATCTGCCGC AATGCCGCCCGCG CCCG CGCGGGCGTAATC TTTTCTGAAGAGGGG TERM 2540 3787055 - 3787080 + F 74 -10.3 -3.79419 | overlap 3787053 3787058 TTTGATCTGCCGCAA TGCCGCCCGCG CCCG CGCGGGCGTAA TCTTTTCTGAAGAGG TERM 2541 3787058 - 3787077 + F 84 -16.4 -2.98387 | overlap 3787055 3787053 GATCTGCCGCAATGC CGCCCGCG CCCG CGCGGGCG TAATCTTTTCTGAAG BRADO3595 3787142 - 3787720 + | hypothetical protein BRADO3596 3787823 - 3788035 + | hypothetical protein TERM 2542 3788059 - 3788080 + T 76 -8.6 -4.13014 | overlap 3788060 3788061 3788072 TGAGCCGACACTCCG TCGCCGCG CAATCT CGCGGCGC TTTTGCGCGTCTCGA TERM 2543 3788295 - 3788266 - T 72 -12.1 -3.30124 | opp_overlap 3788268, overlap 3788268 CGGCAGTCGCGACAA GAGGCCGGCGG CGTAATGC CCGCCGGCCTT TTTGCGTGGGCTTTT TERM 2544 3788268 - 3788293 + T 100 -14.7 -4.67011 | gap 1, opp_overlap 3788268 3788266 GCAGTCGCGACAAGA GGCCGGC-GGCG TAA TGCCCGCCGGCC TTTTTGCGTGGGCTT TERM 2545 3788293 - 3788268 - T 80 -14.7 -3.21924 | opp_overlap 3788268, overlap 3788266 GCAGTCGCGACAAGA GGCCGGCGG CGTAATGC CCGCCGGCC TTTTTGCGTGGGCTT BRADO3597 3789088 - 3788336 - | hypothetical protein BRADO3598 3789295 - 3789627 + | hypothetical protein TERM 2546 3791034 - 3791008 - g 72 -5.8 -4.39166 | overlap 3791010 GGCCATACACCAAAA TTGCTCCTCAGG AGC CCGAAGGAGAAA TCAATCTGATACAAG BRADO3599 3790131 - 3791108 + | hypothetical protein BRADO3600 3792255 - 3791179 - | putative phage integrase BRADO3601 3792524 - 3792252 - | hypothetical protein BRADO3602 3792766 - 3792521 - | hypothetical protein BRADO3603 3793068 - 3792859 - | hypothetical protein BRADO3604 3793244 - 3793071 - | hypothetical protein TERM 2547 3793318 - 3793308 - R 77 -2.4 -5.055 | overlap 3793309 3793310 CGAACTCTGAAAAAA GCGG CGG CCGG GCTTGTTATCGGAGG BRADO3605 3793518 - 3793369 - | hypothetical protein BRADO3606 3794459 - 3793800 - | hypothetical protein TERM 2548 3794378 - 3794414 + g 79 -13 -3.67597 | opp_overlap 3794374, overlap 3794382 TGCCCAGATGATTCG C-CAGGGCGCTGCGGGCG CCA CGGCCGC-GCGCCTTGAG TTGTTCACTGAGCCA TERM 2549 3794382 - 3794409 + g 78 -14.8 -3.29459 | gap 1, opp_overlap 3794374, overlap 3794378 CAGATGATTCGCCAG GGCGCTGCGGGCG CCA CGGCCGC-GCGCC TTGAGTTGTTCACTG BRADO3607 3794556 - 3794810 + | hypothetical protein BRADO3608 3794963 - 3795190 + | hypothetical protein BRADO3609 3795187 - 3795474 + | hypothetical protein BRADO3610 3795471 - 3795725 + | hypothetical protein BRADO3611 3795722 - 3796192 + | hypothetical protein BRADO3612 3796205 - 3796693 + | hypothetical protein BRADO3613 3796693 - 3798525 + | hypothetical protein BRADO3614 3798522 - 3798713 + | hypothetical protein BRADO3615 3798706 - 3799110 + | hypothetical protein BRADO3616 3799107 - 3799406 + | hypothetical protein BRADO3618 3799627 - 3799911 + | hypothetical protein BRADO3619 3799908 - 3800168 + | hypothetical protein TERM 2550 3800670 - 3800622 - g 74 -7.5 -4.25401 | gap 2, overlap 3800626 3800663 GAAAGCGAAGATAAA TCAACGGC-GATT-AGCCCTAGC AGGCA GCAAGGGCTAAATCAGCCGCCGG AAACGGCTAGCCCTA TERM 2551 3800666 - 3800626 - g 73 -11.3 -3.69341 | gap 2, overlap 3800622 3800663 GCGAAGATAAATCAA CGGC-GATT-AGCCCTAGC AGGCA GCAAGGGCTAAATCAGCCG CCGGAAACGGCTAGC BRADO3620 3800229 - 3801491 + | hypothetical protein BRADO3621 3801488 - 3802093 + | putative transcription antitermination protein NusG TERM 2552 3802226 - 3802244 + T 74 -9.5 -3.91858 | opp_overlap 3802226 TGGAATCTGCCCAAA GCCCGGT CTCGA GCCGGGC TTTCTCACATGTGTA BRADO3622 3802785 - 3802249 - | hypothetical protein TERM 2553 3802336 - 3802357 + g 71 -2.9 -4.64861 | gap 1, opp_overlap 3802336, overlap 3802337 ACCGTCGTCGATGAA TCTG-GCAGG AGG CCAGCTCAGG TTTGTTTTGGGCAAC TERM 2554 3803152 - 3803174 + H 71 -11.3 -3.52073 | opp_overlap 3803151 CTTGAGACAACGTAT TGGAGGCCG GTAAG CGGCTTCCA TTGTGCTGTTGGCCA BRADO3623 3803177 - 3803464 + | hypothetical protein TERM 2555 3803976 - 3803957 - g 75 -9.2 -4.15222 | AGGGTTGGCAAGAAA GCAGCCGC GCTC GCCGCTGC GCACCAGCCGGATGC BRADO3624 3803555 - 3804043 + | hypothetical protein BRADO3625 3805173 - 3804073 - | hypothetical protein TERM 2556 3806687 - 3806662 - g 100 -8.3 -5.40072 | gap 1, opp_overlap 3806673 GTTGCCTGAAAAAAA CGCGGT-CGG CATCGAT CCGAACCGCG CCGCGGCGCTGTTCG BRADO3626 3805283 - 3807022 + | hypothetical protein BRADO3627 3807022 - 3808347 + | hypothetical protein BRADO3628 3808344 - 3809213 + | hypothetical protein TERM 2557 3811509 - 3811526 + G 70 -9.9 -3.73775 | CCAGCCGGCCAAGGG TGCGACT GCCA AGTCGCA TTTCGTGGCGCTCGC BRADO3629 3810241 - 3811551 + | hypothetical protein TERM 2558 3811562 - 3811587 + F 84 -13.9 -3.76224 | opp_overlap 3811557 GCTGATGACACCTCC GGCCGCGCGCC GACC GGCGCGCCGTC TTTCGTCCGTCACAA BRADO3630 3811621 - 3812073 + | hypothetical protein BRADO3631 3812089 - 3813414 + | hypothetical protein BRADO3632 3813427 - 3813642 + | hypothetical protein BRADO3633 3813645 - 3814259 + | hypothetical protein TERM 2559 3814530 - 3814546 + G 79 -2.9 -5.00616 | overlap 3814528 TGCTGCCATTGGCGA CGGCC ACCGACC GGCTG TTTTTTCGCGGCGCC BRADO3634 3814265 - 3814645 + | hypothetical protein BRADO3635 3814649 - 3814951 + | hypothetical protein BRADO3636 3814953 - 3815423 + | hypothetical protein TERM 2560 3815540 - 3815570 + G 75 -13.8 -3.25204 | overlap 3815539 3815537 GACCCGCCGTCGCAG CCCTGGCCGCCGGC TAC GCCTGCGCCCTGGG TCTATTTCGAGGTGC BRADO3637 3815435 - 3815881 + | hypothetical protein BRADO3638 3815910 - 3817142 + | hypothetical protein BRADO3639 3817152 - 3817598 + | hypothetical protein TERM 2561 3817794 - 3817846 + G 78 -15.6 -3.15544 | gap 2 GTCGCCTCAGCGCGC GGCGCCGCG-TCGGCTTGGC-GATCG AGC CGATCGGCTGGGCCGATCTCGACGCC TTCATGCGGCTGACC BRADO3640 3817661 - 3817933 + | hypothetical protein TERM 2562 3818077 - 3818117 + G 79 -13.4 -3.67558 | gap 2, overlap 3818078 TGGCGATTGCCGGCG TGAGTGC-GGCCT-CGATCG CGG CGGTCGCAGGCCTGCGCTCG TTGTTCGACTATGTC TERM 2563 3818078 - 3818116 + G 72 -14.7 -2.80053 | gap 2, overlap 3818077 GGCGATTGCCGGCGT GAGTGC-GGCCT-CGATCG CGG CGGTCGCAGGCCTGCGCTC GTTGTTCGACTATGT BRADO3641 3817935 - 3820058 + | hypothetical protein BRADO3642 3820073 - 3820321 + | hypothetical protein BRADO3643 3820323 - 3820682 + | hypothetical protein BRADO3644 3820679 - 3821182 + | hypothetical protein BRADO3645 3821198 - 3821602 + | tail assembly protein homolog BRADO3646 3821599 - 3825399 + | tail fiber protein BRADO3647 3825500 - 3825414 - | hypothetical protein TERM 2564 3825676 - 3825697 + G 80 -15.1 -3.41693 | GACCCGCTTCAAGCG CGCGGCTGC ATTT GCGGCCGCG TTGATTGCTGCTACC TERM 2565 3826994 - 3827022 + G 77 -12.4 -3.72893 | gap 1, opp_overlap 3826984 3826987 3826986 CAGAACACCGGCGGC GGCGGCGCGCACG CGAT CGTGC-CGCCGAC TTTGATCGCGGAATG BRADO3648 3825659 - 3827059 + | hypothetical protein BRADO3649 3827035 - 3829266 + | hypothetical protein TERM 2566 3830051 - 3830061 + G 74 -2.4 -4.82901 | CGTACTCGACATGGA AGGG ACG CCCG TTTTTGTCGGAGCCG BRADO3650 3829317 - 3830465 + | hypothetical protein BRADO3651 3830835 - 3831812 + | hypothetical protein BRADO3652 3831814 - 3832116 + | hypothetical protein BRADO3653 3832128 - 3832298 + | hypothetical protein TERM 2567 3832313 - 3832360 + F 71 -12.5 -3.02461 | gap 1, opp_overlap 3832315 3832316 3832317, overlap 3832353 AGGCCATTGGGCAAA AATC-GGCCCGGCGCGCGCCGC TACCC GCGGACCGCGCCGGGCCCGGCA TCTTGACGAGCGTTC TERM 2568 3832357 - 3832315 - f 100 -17.5 -4.58395 | opp_overlap 3832313 3832353, overlap 3832316 3832317 GCCATTGGGCAAAAA TCGGCCCGGCGCGCGCCGC TACCC GCGGACCGCGCCGGGCCCG GCATCTTGACGAGCG TERM 2569 3832356 - 3832316 - f 95 -21 -3.34716 | opp_overlap 3832313 3832353, overlap 3832315 3832317 CCATTGGGCAAAAAT CGGCCCGGCGCGCGCCGC TACCC GCGGACCGCGCCGGGCCC GGCATCTTGACGAGC TERM 2570 3832355 - 3832317 - f 100 -24.5 -2.60508 | opp_overlap 3832313 3832353, overlap 3832316 3832315 CATTGGGCAAAAATC GGCCCGGCGCGCGCCGC TACCC GCGGACCGCGCCGGGCC CGGCATCTTGACGAG BRADO3654 3832435 - 3832752 + | hypothetical protein BRADO3655 3832779 - 3832925 + | vacuolar ATP synthase proteolipid subunit BRADO3656 3832927 - 3833136 + | hypothetical protein BRADO3657 3833133 - 3833432 + | hypothetical protein TERM 2571 3833469 - 3833449 - T 84 -11.1 -4.13767 | opp_overlap 3833449 CCTGGCACTGGAAAA CCCCGCC GGGTGAG GGCGGGG TTTTGCTCTGGCGCC TERM 2572 3833449 - 3833469 + T 89 -11.1 -4.34402 | opp_overlap 3833449 CCTGGCACTGGAAAA CCCCGCC GGGTGAG GGCGGGG TTTTGCTCTGGCGCC TERM 2573 3833647 - 3833604 - T 75 -3.2 -4.87626 | gap 1 CGTCAACAGTAAAAA CAACCT-ATGGGTTCAATTCC TCC AGCATCGCATCCATGAGGTTG CGAACGTCGGTCAGC BRADO3658 3833826 - 3833608 - | hypothetical protein BRADO3659 3834059 - 3833826 - | hypothetical protein BRADO3660 3834328 - 3834059 - | hypothetical protein TERM 2574 3834588 - 3834576 - g 70 -10.5 -3.67597 | GGCCGCACCCAAGAA GCGGG AAG CCCGC AAGTCGATGAAGCAG BRADO3661 3834556 - 3834816 + | hypothetical protein BRADO3662 3834861 - 3835115 + | hypothetical protein BRADO3663 3835760 - 3835119 - | putative glutathione S-transferase TERM 2575 3835840 - 3835822 - R 100 -13.1 -4.66609 | opp_overlap 3835822 CATCGCACGCAAAAA GCCCCGC TTCCG GCGGGGC TTTTCGGTCGAACGC TERM 2576 3835822 - 3835840 + r 93 -13.8 -4.18018 | opp_overlap 3835822 CATCGCACGCAAAAA GCCCCGCT TCC GGCGGGGC TTTTCGGTCGAACGC BRADO3664 3836277 - 3836062 - | hypothetical protein gloA 3836735 - 3836283 - | lactoylglutathione lyase (methylglyoxalase) (aldoketomutase) (glyoxalase I) (Glx I) (Ketone-aldehyde mutase) (S-D-lactoylglutathione methylglyoxal lyase) HupA 3837315 - 3837617 + | DNA-binding protein HU TERM 2577 3837648 - 3837667 + F 100 -15 -4.58773 | TTGATGGTTTGCGAG GGCCCCCT GCAA AGGGGGCC TTTTCGTTTGATGGG TERM 2578 3837770 - 3837719 - f 77 -13 -3.55071 | gap 1 TTACAGCCGCTGAAA CGACAGCAGCGCCAGCACGACGGAA TAT CTTCGTCGCG-TGGCGCCACCCTCG ATGACTGGGCCCTGA BRADO3669 3838320 - 3838601 + | putative signal peptide TERM 2579 3838627 - 3838654 + T 100 -19.9 -4.43012 | opp_overlap 3838623 CGGTGAAGTCATCAG GAGCCCGGGCG GCATCG CGCCCGGGCTC TTTTCATGTTGAGCT BRADO3670 3838844 - 3838680 - | hypothetical protein BRADO3672 3839170 - 3839937 + | putative transciptional regulatory Sir2-family protein; putative NAD-dependent protein deacetylase. BRADO3673 3840135 - 3840788 + | putative cold shock protein, DNA binding, CspA-like TERM 2580 3840810 - 3840840 + T 84 -8.3 -4.48741 | gap 1, opp_overlap 3840813 3840818, overlap 3840814 3840818 TCCCGGAGCGAAACG CAAGCAGAGCCCCG GATC CGGGGCTTTG-TCG TTTTCTGGTGCCTTC TERM 2581 3840814 - 3840837 + T 80 -14.6 -3.20028 | opp_overlap 3840813 3840818, overlap 3840810 3840818 GGAGCGAAACGCAAG CAGAGCCCCG GATC CGGGGCTTTG TCGTTTTCTGGTGCC TERM 2582 3840818 - 3840833 + T 86 -11.8 -4.2408 | opp_overlap 3840818 3840813, overlap 3840814 3840810 CGAAACGCAAGCAGA GCCCCG GATC CGGGGC TTTGTCGTTTTCTGG TERM 2583 3840867 - 3840885 + T 82 -5.8 -4.85267 | overlap 3840882 CTTCCTCATGCTGAT GCCCGGCC GTG GGAGGGGC TTTTTGGTCCTTTCT TERM 2584 3841322 - 3841280 - T 100 -12.7 -4.8622 | overlap 3841281 3841306 GGCTTCAATGAAAAA GTTCGGATGCTCCCGCAGC GGCAA GACCCGGGAGCATCCGAAG TGGTGCGGGTGAATC TERM 2585 3841321 - 3841281 - T 89 -16.2 -3.5125 | overlap 3841280 3841306 GCTTCAATGAAAAAG TTCGGATGCTCCCGCAGC GGCAA GACCCGGGAGCATCCGAA GTGGTGCGGGTGAAT TERM 2586 3841544 - 3841515 - T 71 -11.4 -3.53012 | gap 1, opp_overlap 3841513, overlap 3841516 3841519 CGGCGTCGCCTGAAA CCGAGCCGGCCGC TCGAG GCGGCCGGTT-GG CAATGATTGCGAGAG BRADO3674 3842015 - 3841611 - | hypothetical protein BRADO3675 3843345 - 3842188 - | hypothetical protein BRADO3676 3843573 - 3843878 + | putative ETC complex I subunit region protein (fragment) BRADO3677 3844424 - 3843939 - | AsnC/Lrp family transcriptional regulator BRADO3678 3845074 - 3844430 - | TetR family transcriptional regulator BRADO3679 3845398 - 3847005 + | putative acyl-CoA carboxylase, beta chain TERM 2587 3847527 - 3847505 - g 81 -16.2 -3.14132 | TCCCGTGCTGATCAA GGCCTCCGCC GGC GGCGGTGGCC GCGGCATGCGCGTAG TERM 2588 3847847 - 3847880 + G 70 -10.3 -3.72324 | gap 1, opp_overlap 3847835 CTATGTCGGCGCCGG CACGATCGAGTTCGTC TCC GACGGGCGCGA-CGTG TTCTTCATCGAGATG BRADO3680 3847002 - 3849014 + | putative acyl-CoA carboxylase biotin-carrying subunit; alpha chain hmgL 3849038 - 3849952 + | hydroxymethylglutaryl-CoA lyase (HMG-CoA lyase) (HL) (3-hydroxy-3-methylglutarate-CoA lyase) BRADO3682 3851375 - 3850017 - | putative TRAP-type C4-dicarboxylate transporter, DctM subunit; putative membrane component. BRADO3683 3851920 - 3851372 - | putative TRAP-type C4-dicarboxylate transport system, DctQ subunit; putative membrane protein. TERM 2589 3851888 - 3851842 - G 100 -23.9 -2.62616 | gap 2, overlap 3851844 TGAGCGCGGAGATCA CACGCTGA--ACCGGCGCCAGCG GTC CGCTGGCGCCGGTGGTCGGCGTG GCCTCACTGTCGGAG TERM 2590 3851886 - 3851844 - G 100 -20.7 -2.8547 | gap 2, overlap 3851842 AGCGCGGAGATCACA CGCTGA--ACCGGCGCCAGCG GTC CGCTGGCGCCGGTGGTCGGCG TGGCCTCACTGTCGG BRADO3684 3852943 - 3851921 - | putative TRAP-type C4-dicarboxylate transport system, periplasmic component (dctP-like); putative signal peptide. BRADO3685 3853307 - 3853543 + | putative signal peptide TERM 2591 3853597 - 3853647 + T 95 -16 -3.9461 | overlap 3853601 ACATCGGATCCTCGC GACATCGGGAGGCGCCATGGCGGG CAA CCGGCCATGGCGCCGCTCCATCAC TTCTTCTTGCCGCGC TERM 2592 3853601 - 3853643 + T 90 -19.8 -2.71503 | overlap 3853597 CGGATCCTCGCGACA TCGGGAGGCGCCATGGCGGG CAA CCGGCCATGGCGCCGCTCCA TCACTTCTTCTTGCC BRADO3686 3853997 - 3853644 - | hypothetical protein TERM 2593 3854187 - 3854201 + H 73 -12.8 -3.17798 | overlap 3854198 ACAGTCCTCCACATC GCGCCC GCC GGGCGC TTGCATGCTTTGTAG TERM 2594 3854352 - 3854382 + G 86 -6.1 -5.01811 | gap 2 GCCTCTGTATTTTGG GGGCG-CGG-GCGCA TGT TGCTCGCCGTCGCTC TTTTTGCTTTCCTCG BRADO3687 3854334 - 3854585 + | signal peptide BRADO3688 3854598 - 3854774 + | hypothetical protein BRADO3689 3855225 - 3855920 + | hypothetical protein BRADO3690 3856098 - 3856484 + | putative NUDIX hydrolase family protein TERM 2595 3856495 - 3856522 + F 70 -9.8 -3.56273 | gap 1 ACTGACCTTCCGGAT CGTCGG-GAACGC CTC GCGATCTCCGGCG TTATCTGGTCATGAC TERM 2596 3856646 - 3856658 + G 78 -10.5 -4.07568 | GCGCGAGCACGAGGA GGCCC AGC GGGCC TTTTACAAGAACCGC BRADO3691 3856533 - 3856727 + | hypothetical protein TERM 2597 3856744 - 3856722 - T 85 -15.6 -3.44146 | overlap 3856738 GCCGCCGACAAGCAA GGCTGAGCCG GAA CGACTCAGCC GGCTGCGCGCGTGCG BRADO3692 3857161 - 3856739 - | hypothetical protein TERM 2598 3857074 - 3857086 + g 71 -9.1 -3.79113 | AGAAGCGATCCGCGA GGCGT CGC ACGCC TTCTTCTCCGCCGAT BRADO3693 3857710 - 3857294 - | putative response regulator receiver protein (CheY-like) TERM 2599 3858483 - 3858493 + H 79 -8.2 -4.3255 | opp_overlap 3858473 3858472, overlap 3858482 AAAACCGCCGTTCCG GCGC AGC GCGC TTTGTTAGTTCACGG BRADO3694 3858753 - 3859736 + | putative signal peptide TERM 2600 3859773 - 3859795 + T 91 -18.4 -3.21218 | overlap 3859774 TTCGAGACGTGCGAA TGGCCGGCGC CTT GCGCCGGCCG TTCGTCATGACAGGT TERM 2601 3859774 - 3859794 + T 90 -19.7 -2.52516 | overlap 3859773 TCGAGACGTGCGAAT GGCCGGCGC CTT GCGCCGGCC GTTCGTCATGACAGG BRADO3695 3860731 - 3859823 - | LysR family transcriptional regulator TERM 2602 3860776 - 3860786 + H 72 -4 -4.60487 | TCAATGCCACCGATC TTGA TAA TCAA TTTTTCGAAATGGTC TERM 2603 3861413 - 3861374 - g 74 -9.9 -3.89302 | gap 1, overlap 3861376 ACCAAGGAGATGAAA TACCGCG-TCGGCCTGCC GGCGT GGCTGGCCAAGCGCGGCG TGGCATCGCTGGTCA TERM 2604 3861411 - 3861376 - g 81 -14.7 -3.52849 | gap 1, overlap 3861374 CAAGGAGATGAAATA CCGCG-TCGGCCTGCC GGCGT GGCTGGCCAAGCGCGG CGTGGCATCGCTGGT BRADO3696 3860876 - 3862030 + | hypothetical protein BRADO3697 3862070 - 3863023 + | glyoxalase TERM 2605 3863328 - 3863357 + G 73 -14.3 -3.17212 | opp_overlap 3863326 3863325, overlap 3863330 CGGCTACATCAACTC GAGCTCGTCGTCG ATGC CGACGGCGAGCTG TTCGTGAAGTCATAA TERM 2606 3863330 - 3863355 + G 84 -16.9 -3.1478 | opp_overlap 3863326 3863325, overlap 3863328 GCTACATCAACTCGA GCTCGTCGTCG ATGC CGACGGCGAGC TGTTCGTGAAGTCAT BRADO3698 3863007 - 3863372 + | hypothetical protein BRADO3699 3863412 - 3864542 + | hypothetical protein BRADO3700 3864593 - 3865750 + | major facilitator superfamily permease BRADO3701 3865767 - 3866342 + | hypothetical protein BRADO3702 3866342 - 3867340 + | putative fumarylacetoacetate hydrolase TERM 2607 3867915 - 3867933 + G 82 -16 -3.39505 | GCGAATTGCTGCATG CGCTGGCC GAG GGCCAGCG TTATGCCTGTCCGGT BRADO3703 3867344 - 3868267 + | putative signal peptide BRADO3704 3868704 - 3868318 - | hypothetical protein TERM 2608 3868881 - 3868834 - R 79 -16.3 -2.54193 | CACGACGCGAACGGA CAGCGG-GACACGGCTCCCGGCC CGTT GGCCGGCAGCCGCGTAACCGC-G CGGAGGGCAGATGAG BRADO3705 3869760 - 3868954 - | putative 3-oxoacyl-[acyl-carrier-protein] reductase, related to short chain alcohol dehydrogenases TERM 2609 3869056 - 3869066 + g 70 -8.2 -3.90112 | opp_overlap 3869055, overlap 3869038 GTTCAGCGCAATCAT CGCG CGC CGCG TTTCGTTGGCGCGGA TERM 2610 3869546 - 3869525 - G 72 -11.5 -3.53811 | overlap 3869526 TCGAGCCGGCCGAAA CGCTCGCGC GCCA GAGCGAGCG TGCTCGCGCAGGCGG TERM 2611 3869598 - 3869638 + g 74 -12.4 -3.55622 | gap 1 CGAGCGTCTCGGTTC GCACGCCGTGGCTGGCAGC GAGC GCCGCC-GTCTCGGCGAGC TTTGCCCGGGTTCGG BRADO3706 3870440 - 3869784 - | putative AhpC/Tsa family protein, selenocysteine-containing oxidoreductase BRADO3707 3871467 - 3870700 - | putative 6-oxocamphor hydrolase TERM 2612 3871842 - 3871898 + G 70 -13.1 -3.02144 | gap 4, opp_overlap 3871864, overlap 3871864 3871878 CGGAGGCGGAGGGCG CCGTCGGACGCCGCCGGCAG-AA--GCCC TCC GGGCTGTTGCGGCTGGCGGCG-CCGGTGG TGTTCGGGCGGCTGC BRADO3708 3871598 - 3872509 + | LysR family transcriptional regulator BRADO3709 3872699 - 3872908 + | putative signal peptide BRADO3710 3875476 - 3872918 - | putative protein serine-threonine phosphatase TERM 2613 3873226 - 3873266 + g 72 -14.5 -2.75382 | overlap 3873223 3873235 TCACCACCATGCCCT CGCCGCCGCCGGCCGTGAG CTG CTCCCACCAGGCGGTGGCG TCGTTCACTGCGGTC BRADO3711 3876891 - 3875485 - | hypothetical protein TERM 2614 3877115 - 3877147 + r 100 -21.3 -3.97947 | opp_overlap 3877116 3877118, overlap 3877116 3877118 AGCCCTTGTGCAATG AGACCCGGGCGCGTC TGT GACGCGTCCGGGTCA TTTGTCGTCAGTGCA TERM 2615 3877116 - 3877146 + r 100 -24.8 -2.98447 | opp_overlap 3877116 3877118, overlap 3877115 3877118 GCCCTTGTGCAATGA GACCCGGGCGCGTC TGT GACGCGTCCGGGTC ATTTGTCGTCAGTGC TERM 2616 3877146 - 3877116 - R 100 -22.6 -2.70932 | opp_overlap 3877116 3877115 3877118, overlap 3877118 GCCCTTGTGCAATGA GACCCGGGCGCGTC TGT GACGCGTCCGGGTC ATTTGTCGTCAGTGC TERM 2617 3877118 - 3877144 + r 100 -21.6 -3.0439 | opp_overlap 3877118 3877116, overlap 3877116 3877115 CCTTGTGCAATGAGA CCCGGGCGCGTC TGT GACGCGTCCGGG TCATTTGTCGTCAGT TERM 2618 3877144 - 3877118 - R 91 -19.4 -2.90075 | opp_overlap 3877116 3877115 3877118, overlap 3877116 CCTTGTGCAATGAGA CCCGGGCGCGTC TGT GACGCGTCCGGG TCATTTGTCGTCAGT BRADO3712 3878591 - 3877155 - | putative ribonucleoprotein-like protein TERM 2619 3878993 - 3879009 + G 73 -13.7 -3.13403 | overlap 3878991 ACGGGCGATGCTGTT GCTGCCC AAG GGGCAGC TATTGCTGCCCAAGG TERM 2620 3879070 - 3879095 + G 73 -13.9 -3.17212 | opp_overlap 3879053 3879051, overlap 3879071 TCCTCACCACCGCCT GGCCGCCTGGC GGTT GCCGGGCGGCG TTGATGGCATGCTGG TERM 2621 3879071 - 3879094 + G 79 -17.4 -2.50113 | opp_overlap 3879053 3879051, overlap 3879070 CCTCACCACCGCCTG GCCGCCTGGC GGTT GCCGGGCGGC GTTGATGGCATGCTG BRADO3713 3878937 - 3879233 + | hypothetical protein TERM 2622 3879594 - 3879568 - f 100 -13.7 -5.46657 | opp_overlap 3879564 3879592 GAGGGCAATAAAAAA CCCTCCGGAGC GGCTG GCTCGGGAGGG TCCGTATGATACGGA TERM 2623 3880009 - 3880030 + G 73 -12.9 -3.28924 | opp_overlap 3880011 CGCCTATGACGATTA CAGCGCGCG GCTG CGCGCGCCG TTGTCGGGCGAGATC TERM 2624 3880028 - 3880011 - g 71 -14.1 -2.83715 | opp_overlap 3880009 CCTATGACGATTACA GCGCGCG GCTG CGCGCGC CGTTGTCGGGCGAGA BRADO3716 3879899 - 3880981 + | putative signal peptide BRADO3717 3881061 - 3881288 + | hypothetical protein BRADO3718 3881569 - 3881291 - | hypothetical protein BRADO3719 3881736 - 3882476 + | glutathione S-transferase domain-containing protein BRADO3720 3882473 - 3883447 + | hypothetical protein BRADO3721 3883554 - 3884144 + | hypothetical protein BRADO3722 3884465 - 3884265 - | hypothetical protein BRADO3724 3884684 - 3885040 + | hypothetical protein BRADO3725 3885181 - 3885597 + | putative penicillinase repressor, transcriptional regulatory protein TERM 2625 3885926 - 3885969 + G 72 -13.1 -3.16492 | gap 2, overlap 3885924 3885929 GCGCGCGGCGGAGCT CGCGGCCGCTGCGACGCTGGC CTAT GCCGGCGTCGC-G-GGCCTCA TGTTGCTGCGTCTGG TERM 2626 3885929 - 3885966 + G 85 -17.8 -2.77999 | gap 2, overlap 3885926 3885924 CGCGGCGGAGCTCGC GGCCGCTGCGACGCTGGC CTAT GCCGGCGTCGC-G-GGCC TCATGTTGCTGCGTC BRADO3726 3885636 - 3888131 + | hypothetical protein TERM 2627 3888219 - 3888245 + F 78 -12.4 -3.78775 | overlap 3888218 TTGAACGGCTCGCCC CGTAATGCTACG GTA TGTAGCGTTACG TTTCGTCATCAAGGG TERM 2628 3888543 - 3888526 - g 87 -6.9 -5.1101 | overlap 3888527 3888529 3888530 GGAGGAGGCAAAAAA GCAGCAG GTCG CCGCCGC CGCGATGGCACCGCC TERM 2629 3888941 - 3888928 - g 75 -6.7 -4.4078 | CGGCCTCAACGAAAA TCTCG CGCG CGAGA TCCTGGAGCTGCACA TERM 2630 3889348 - 3889305 - g 73 -9.4 -3.91911 | gap 1, opp_overlap 3889314 3889318 GTGATCTCAAGGAAA CGGCCAAGGCGATGGTCGCGG CGC CCGCGGCC-TGGTCTCTGCCG CCGACCAAGCTGAGG BRADO3727 3888269 - 3889714 + | hypothetical protein TERM 2631 3889927 - 3889965 + G 81 -3.9 -5.05782 | gap 2, overlap 3889927 GGCGATCGCGCGCTA CTGCTCGA-TGGCAA-GCC GGC GGCGTTGCCACTCGACGGG TTTTTTGCGCTCAAT BRADO3728 3889711 - 3890955 + | hypothetical protein BRADO3729 3891031 - 3892989 + | dipeptidyl anminopeptidase BRADO3730 3893260 - 3893982 + | putative branched-chain amino acid transport system ATP-binding protein BRADO3731 3893975 - 3894721 + | putative branched-chain amino acid transport system ATP-binding protein TERM 2632 3895672 - 3895660 - g 70 -10.5 -3.73534 | overlap 3895620 CAAGCGGATGAAGAA CGGCG CGC CGCCG ACGATGGTGCAGGCC BRADO3732 3894755 - 3895984 + | ABC transporter substrate-binding protein TERM 2633 3895995 - 3895985 - f 76 -8.2 -4.20367 | opp_overlap 3895992, overlap 3895986 CTGTTGAAGAAATAA GCCG CCG CGGC CCCCGGCGGTCCGCC TERM 2634 3896004 - 3895986 - f 70 -11.6 -3.11738 | opp_overlap 3895992 3895996 3895997, overlap 3895985 TGTTGAAGAAATAAG CCGCCGCG GCC CCCGGCGG TCCGCCGCCGGGCTG TERM 2635 3895992 - 3896019 + F 73 -11.2 -3.65046 | gap 1, opp_overlap 3895985 3895986, overlap 3895996 3895997 AGAAATAAGCCGCCG CGGCCC-CCGGCG GTC CGCCGCCGGGCTG TTGTTGACGTCAGGA TERM 2636 3895996 - 3896017 + F 76 -12.9 -3.40611 | opp_overlap 3895986, overlap 3895992 3895997 ATAAGCCGCCGCGGC CCCCGGCGG TCCG CCGCCGGGC TGTTGTTGACGTCAG TERM 2637 3895997 - 3896016 + F 80 -16.4 -2.64045 | opp_overlap 3895986, overlap 3895996 3895992 TAAGCCGCCGCGGCC CCCGGCGG TCCG CCGCCGGG CTGTTGTTGACGTCA BRADO3733 3896061 - 3896924 + | putative ABC transporter, permease protein; putative branched-chain amino acid transport permease BRADO3734 3896926 - 3897894 + | ABC transporter TERM 2638 3897955 - 3897933 - f 74 -9 -3.95073 | opp_overlap 3897933 TCGGAGAGGCAGAAA GCGGTGGATG AGC CGGCCACCGC TTCTGCTGCGGCGTG TERM 2639 3897933 - 3897955 + F 71 -11.2 -3.4072 | opp_overlap 3897933 TCGGAGAGGCAGAAA GCGGTGGATG AGC CGGCCACCGC TTCTGCTGCGGCGTG TERM 2640 3898057 - 3898079 + G 74 -9.9 -3.81626 | gap 1 TGAACTGGTTCCGCG CCG-TCCTCC CCAA GGAGGAGCGG TTCTTCGATTTGTTC BRADO3735 3898020 - 3898682 + | putative low-affinity phosphate transport accessory protein BRADO3736 3898697 - 3899704 + | putative low-affinity phosphate transport protein TERM 2641 3901537 - 3901513 - g 100 -13.6 -5.22006 | CGACGACAAGAAAAA GCTGGAGGCG TTCAT CGCCTCCAAC AATTCCGGTGTCGCC TERM 2642 3901542 - 3901574 + G 77 -13.4 -3.51934 | gap 1, opp_overlap 3901541 3901540, overlap 3901540 TCGCCTCCAACAATT CCGGTGTCGCCGACG ACGT CGACGGCGAT-CCGG TGTTTCTGGCCAAGA prfC 3900053 - 3901672 + | peptide chain release factor RF-3; GTP-binding factor TERM 2643 3901723 - 3901754 + T 77 -15.2 -2.64472 | gap 1, overlap 3901720 3901720 CACGCTCTCTCGTCA TTCCGGG-GCGCGAC GAA GTCGCGAGCCCGGAA TCCATTTCGCCGCTC BRADO3738 3902242 - 3901841 - | LuxR family transcriptional regulator BRADO3739 3903105 - 3902239 - | Serine protease TERM 2644 3902427 - 3902411 - G 81 -15.1 -3.53444 | opp_overlap 3902406 3902422 TCACCCTGGCGCAAA CCCGCCG CGG CGGCGGG ACCAGCCTTGTCGAT BRADO3740 3904014 - 3903274 - | putative hydantoin-racemase BRADO3741 3904164 - 3904760 + | putative signal peptide BRADO3742 3904957 - 3905532 + | hypothetical protein BRADO3743 3905644 - 3907239 + | putative O-succinylbenzoate--CoA ligase BRADO3744 3907417 - 3908070 + | hypothetical protein BRADO3745 3908134 - 3908676 + | putative signal peptide engA 3908761 - 3910131 + | GTP-binding protein EngA BRADO3747 3911663 - 3910197 - | XRE family transcriptional regulator TERM 2645 3910253 - 3910289 + g 78 -14.3 -3.54424 | opp_overlap 3910241 3910243, overlap 3910255 AATCATCTGGCAGGA TCTCCCGCCCGATCGGC GGC GCCGAGCGGGCGGCGCA TTTCGGCCGGTGACA TERM 2646 3910255 - 3910288 + g 72 -14.5 -2.72511 | gap 1, opp_overlap 3910241 3910243, overlap 3910253 TCATCTGGCAGGATC TC-CCGCCCGATCGGC GGC GCCGAGCGGGCGGCGC ATTTCGGCCGGTGAC TERM 2647 3911261 - 3911233 - G 89 -14.5 -4.07568 | overlap 3911234 TCGTTGGCGTCAAAA CCCTCCGGCAGCG GCG CGCCGCCGGAGAT CGAAGGCGCCCGCTC TERM 2648 3911260 - 3911234 - G 86 -18 -3.04398 | overlap 3911233 CGTTGGCGTCAAAAC CCTCCGGCAGCG GCG CGCCGCCGGAGA TCGAAGGCGCCCGCT aceA 3911810 - 3913447 + | isocitrate lyase TERM 2649 3913509 - 3913480 - T 77 -14.9 -2.82933 | opp_overlap 3913480 GCTGAACTGATGAGA CCCGTCTGGGGCG GCAA CGCTCCAGGCGGG TTTTGCTTTGGCGCG TERM 2650 3913480 - 3913509 + T 100 -19.3 -4.54727 | opp_overlap 3913480 GCTGAACTGATGAGA CCCGTCTGGGGCG GCAA CGCTCCAGGCGGG TTTTGCTTTGGCGCG BRADO3749 3913910 - 3913602 - | hypothetical protein BRADO3750 3914546 - 3913926 - | RhtB family amino acid efflux protein TERM 2651 3914009 - 3913969 - G 100 -10.9 -4.58773 | CCGAGCAAAGCAAAA CCGCCGGCGAACGCCCGGC GCA GCCACGCCATCACCCGCGG ACGGCTGACGACCCG BRADO3751 3914960 - 3916015 + | hypothetical protein BRADO3752 3916933 - 3916496 - | hypothetical protein BRADO3753 3917944 - 3918210 + | hypothetical protein BRADO3754 3921593 - 3918891 - | putative beta-(1-3)-glucosyl transferase, ndvB-like TERM 2652 3921884 - 3921921 + r 88 -14.9 -3.77722 | gap 1, overlap 3921888 GCTGCCCTCCGCCTG GATCTGCCCTGCCGGCAC AGC GGGCGGGCAGGGCA-ATC TTGTTACTGCTTCGC TERM 2653 3921888 - 3921918 + r 80 -16.8 -2.67365 | overlap 3921884 CCCTCCGCCTGGATC TGCCCTGCCGGCAC AGC GGGCGGGCAGGGCA ATCTTGTTACTGCTT BRADO3755 3922497 - 3921925 - | putative cyclic beta-1-3, beta-1-6-glucan synthesis regulatory protein, ndvD-like TERM 2654 3923626 - 3923646 + G 74 -15.4 -2.62616 | opp_overlap 3923598 AGGGCGCACTGCCGT CGCGCGCC AACCA GGCGCGCG TGGTGTCGGAGATCC BRADO3757 3922875 - 3924491 + | putative beta (1-6) glucans synthase, ndvC-like BRADO3758 3924831 - 3924451 - | hypothetical protein BRADO3759 3926318 - 3924939 - | hypothetical protein TERM 2655 3926715 - 3926757 + G 82 -16.9 -2.83012 | TGGGCACGGCGCATG CCGTCCTCGCCGCGCGCGA GGCGA TCGCGCGCGGTGCCGACGA TCTCCTCGTCGCGTT TERM 2656 3927791 - 3927755 - g 70 -11.4 -3.42407 | overlap 3927751 CAGACCACGAAGGAA GGCGCGGCGGCGCGCT TCCGG AACGCGAAGCTGCGCC AGACGAAGTGAGAGC glmU 3926453 - 3927802 + | bifunctional: N-acetyl glucosamine-1-phosphate uridyltransferase (N-terminal); glucosamine-1-phosphate acetyl transferase (C-terminal) BRADO3761 3927825 - 3928013 + | hypothetical protein BRADO3762 3928261 - 3928034 - | hypothetical protein TERM 2657 3928952 - 3928969 + G 72 -6.9 -4.19177 | overlap 3928948 CTGCCGCATTTGAAG GGCGCGT TCGC ACTCGCC TTTCTGTTCAAGGGT glmS 3928493 - 3930319 + | D-fructose-6-phosphate amidotransferase TERM 2658 3930374 - 3930389 + F 70 -10.4 -3.59738 | opp_overlap 3930374 AGCCGGGATCCATAA CCACCG TCCT CGGTGG TTTGCAGCTCTGGTA TERM 2659 3930455 - 3930482 + F 91 -17 -3.28712 | overlap 3930477 GGGTCCCGGATCGGC GCCCGCCAACGC TTTC GCGTTGCCGGGC TTGTCCGGGACGACG TERM 2660 3930477 - 3930501 + F 81 -6.3 -4.78107 | overlap 3930455 AACGCTTTCGCGTTG CCGGGCTTGTC CGG GACGACGCCGG TTTTTACTCGTGCTC BRADO3764 3930631 - 3931245 + | amino acid transporter LysE BRADO3765 3931397 - 3932194 + | hypothetical protein BRADO3766 3932595 - 3932221 - | hypothetical protein TERM 2661 3932825 - 3932840 + H 74 -10.4 -3.76402 | opp_overlap 3932825 TCGTGCGTGAGGAGA GGGCGT GACC ACGCCC TTTCCTCCATACAGT TERM 2662 3933324 - 3933338 + G 83 -8.5 -4.57569 | ACCAACGTCGCTGGC CCCGG CATTC CCGGG TTTTTCCAGGAGTGG TERM 2663 3934592 - 3934613 + G 77 -13 -3.59979 | CCTGGTCGGCAGCGT CGGCGTGC AGCTGC GCACGCCG TTTCAGGTGCAGGGC BRADO3767 3933024 - 3934901 + | putative esterase/lipase/outer membrane autotransporter TERM 2664 3934973 - 3935001 + F 100 -16.8 -4.30978 | gap 1, overlap 3934961 3934976 AGGATGCGGCCAAGG CG-AGGGCAGCCC GGAA GGGCTGCCCTTCG TTTTCGTGCCTTCAG TERM 2665 3934976 - 3934997 + F 100 -17.3 -3.72073 | overlap 3934973 3934961 ATGCGGCCAAGGCGA GGGCAGCCC GGAA GGGCTGCCC TTCGTTTTCGTGCCT BRADO3768 3935122 - 3935937 + | hypothetical protein TERM 2666 3935987 - 3935969 - T 79 -16 -2.52464 | GTTCCGGGCAAGCCA CGACGCGC GAA GCGCGTCG CGGCGCCGACCCGGG recG 3938235 - 3936133 - | DNA helicase, ATP-dependent resolution of Holliday junctions, branch migration TERM 2667 3936214 - 3936183 - G 70 -13 -3.05022 | gap 1, opp_overlap 3936188 3936208, overlap 3936186 3936190 GTTCGTAGAGATACA GCAGACAGCGCAGCG CAT CGCTGCGCGGTCC-C TTCAGCTTGGGATCG TERM 2668 3936212 - 3936186 - G 85 -18 -2.74597 | opp_overlap 3936188 3936208, overlap 3936183 3936190 CGTAGAGATACAGCA GACAGCGCAGCG CAT CGCTGCGCGGTC CCTTCAGCTTGGGAT TERM 2669 3936188 - 3936210 + g 71 -14.8 -2.55074 | opp_overlap 3936186 3936183 3936190, overlap 3936208 TAGAGATACAGCAGA CAGCGCAGCG CAT CGCTGCGCGG TCCCTTCAGCTTGGG TERM 2670 3936208 - 3936190 - G 77 -16 -3.00259 | opp_overlap 3936188, overlap 3936186 3936183 GAGATACAGCAGACA GCGCAGCG CAT CGCTGCGC GGTCCCTTCAGCTTG TERM 2671 3937966 - 3937933 - G 86 -5.9 -5.00616 | gap 1 CTTGGGCCGAAAAAA CGTCAGC-ACGACGTC GCC GGTGTCGTCGCTGGCG TAAACCAGATAAGGG TERM 2672 3938386 - 3938403 + H 81 -9.8 -4.22338 | opp_overlap 3938382 CGCTATATGAACCGC GCCCGG CACCGT CCGGGC TTTTGGCGTTGTCCT BRADO3770 3938487 - 3938720 + | hypothetical protein TERM 2673 3942050 - 3941998 - g 72 -12.9 -3.12351 | gap 3, overlap 3942007 CTGCCGTAGAGCCAA TGTCG-AGAAGGTCGACGCCGGC-CC GAAG GGCGCCGTCATCG-CCTTCCGCGACA ACAGTTTTGCCTATC Mfd 3938717 - 3942235 + | transcription repair coupling factor TERM 2674 3942241 - 3942226 - T 83 -11.8 -4.02817 | opp_overlap 3942232 CGCGGAGAAGAAGAA GGCGGC GTAG GCCGCC CGACTTTAGGTTATA BRADO3773 3943845 - 3942445 - | hypothetical protein TERM 2675 3943952 - 3943940 - R 77 -2.7 -4.98857 | ATTCAACGAGAAAAA CAATC TGA AATTG TGTGTCTTTTGTTGA BRADO3774 3945487 - 3944255 - | putative signal peptide BRADO3775 3947145 - 3945601 - | putative acid-CoA ligase BRADO3776 3949024 - 3947159 - | binding protein component of ABC transporter precursor TERM 2676 3948863 - 3948845 - G 70 -13.1 -3.06796 | GGGCATGTGATCGAA GCCGGCC GGCAT GGCCGGC GCGCCGTGCATGGCG BRADO3777 3949261 - 3950028 + | putative signal peptide TERM 2677 3950065 - 3950084 + T 100 -15 -5.46657 | opp_overlap 3950065 CATCGACACGCAAAA GGCGCTCC GGTC GGAGCGCC TTTTTTATTCAGGTC TERM 2678 3950084 - 3950065 - T 100 -15 -4.24204 | opp_overlap 3950065 CATCGACACGCAAAA GGCGCTCC GGTC GGAGCGCC TTTTTTATTCAGGTC BRADO3778 3950524 - 3950192 - | hypothetical protein BRADO3779 3950644 - 3951597 + | putative malonate transporter BRADO3780 3952819 - 3951605 - | 2-octaprenyl-6-methoxyphenyl hydroxylase TERM 2679 3952972 - 3952997 + G 91 -12.5 -4.20531 | gap 1, opp_overlap 3952958 3952960 AGAGCGCGGTATCCC CGACGCCCGCGC ATC GCGCGGCCG-CG TTTTCGGTCCATGTG BRADO3781 3952938 - 3953672 + | putative phosphatidylcholine synthase TERM 2680 3954139 - 3954175 + G 72 -14.5 -2.67803 | opp_overlap 3954141, overlap 3954136 3954135 GCAGGATCTCGAGAT CATGATCGCGGCGGTGA TCA TCGCGGTCGTGATCATG TACGTTTCGTCCGGG BRADO3782 3953669 - 3954394 + | hypothetical protein TERM 2681 3954888 - 3954866 - g 72 -5.4 -4.30576 | overlap 3954867 CGCCTACTACGAAAA TCTGGGCGGC TAC GCCACCGAGC GCAACATCGGCTGGC qor 3954624 - 3955571 + | quinone oxidoreductase, NADPH-dependent BRADO3784 3956337 - 3955588 - | putative signal peptide TERM 2682 3956308 - 3956292 - G 70 -10.1 -3.67597 | overlap 3956303 CGGTCGAGGCAACAA GCGCAGC GAA ACTGCGC TGCAGTTCACGAAAG TERM 2683 3956412 - 3956369 - R 80 -14.4 -3.21099 | gap 1, overlap 3956323 3956370 TGCCGTGACGATGAA CGCCAG-CGGCCGCGGCGCAC CCG GCGCGCCGCGGTCGACAGGAA TGAGGCGGAGAGGAC TERM 2684 3956411 - 3956370 - R 76 -15.7 -2.52516 | gap 1, overlap 3956323 3956369 GCCGTGACGATGAAC GCCAG-CGGCCGCGGCGCAC CCG GCGCGCCGCGGTCGACAGGA ATGAGGCGGAGAGGA TERM 2685 3956440 - 3956413 - R 84 -15.6 -3.25823 | opp_overlap 3956416 CGCGGTCGACAGGAA TGAGGCGGAGAG GACG CTCACCGCCTCA TTCGAAACGAGCCTC BRADO3785 3956739 - 3956458 - | hypothetical protein TERM 2686 3957050 - 3957028 - g 73 -14.8 -2.86271 | overlap 3957025 CCCCTACGACAATCA CGGCCACGGC CAT GCCGCGGCCA TTCAGGCCGAAACCG BRADO3786 3956993 - 3957964 + | putative luciferase-alpha subunit argD 3959190 - 3957994 - | bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein TERM 2687 3959269 - 3959232 - H 100 -21.4 -4.07568 | opp_overlap 3959239, overlap 3959233 GGTGGGGGCGCAAAA GCGAGAAGGCCGCTCC TTTGCG GGAGCGGCCTTCTCGA AAACCTGGAGCTGAT TERM 2688 3959268 - 3959233 - H 100 -24.9 -3.04398 | opp_overlap 3959239, overlap 3959232 GTGGGGGCGCAAAAG CGAGAAGGCCGCTCC TTTGCG GGAGCGGCCTTCTCG AAAACCTGGAGCTGA TERM 2689 3959239 - 3959262 + H 88 -16 -3.29144 | opp_overlap 3959233 3959232 GCGCAAAAGCGAGAA GGCCGCTCCT TTGC GGGAGCGGCC TTCTCGAAAACCTGG TERM 2690 3959658 - 3959715 + G 90 -18.6 -3.14602 | gap 3, opp_overlap 3959649, overlap 3959690 GATGAAGTCCAGGCG GCGATCGCCACCGGCTCAGCCGAACGCTG CTC CGGCGT--GGCCGAGCGGGTGGC-ATCGC TGTTCATCGCATCCG TERM 2691 3960275 - 3960259 - g 75 -9.4 -4.08767 | GCGAGGCGGTGAAAA CGAGGC TGCTC GCCTCG GCGCCGCCACACCTC BRADO3789 3959616 - 3960743 + | hypothetical protein BRADO3790 3962088 - 3960751 - | hypothetical protein TERM 2692 3961745 - 3961757 + g 71 -9.1 -3.80573 | GACGCGCGGTGAACG GCGTC CAG GACGC TTTCGTACTGCTGGG TERM 2693 3962403 - 3962382 - g 72 -8.7 -4.11692 | gap 1 CATCGACCTGGAAAA CCCGAGC-CG CGA CGTGCTCGAG CAGATGTTCCAGGTG TERM 2694 3962751 - 3962739 - g 83 -3.4 -5.18726 | overlap 3962742 GCGCGAGAAGAAAAA GATC GGTGA GATC GCGCAGTCGATCCTG BRADO3791 3962200 - 3962790 + | putative two-component response regulator:antitermination factor NasT BRADO3792 3962787 - 3963941 + | putative nitrate transporter component, nrtA nirA 3964259 - 3966076 + | ferredoxin-nitrite reductase BRADO3794 3966073 - 3967680 + | sulfite reductase TERM 2695 3967713 - 3967742 + T 100 -16.5 -4.43477 | opp_overlap 3967715 3967741, overlap 3967715 AAAGGCGGCGGATAA AATTCTCGGCCGG AACT CCGGCCGAGAATG TTTTGGTTCCCTGCA TERM 2696 3967740 - 3967715 - T 100 -19.1 -4.37092 | opp_overlap 3967715 3967713 AGGCGGCGGATAAAA TTCTCGGCCGG AACT CCGGCCGAGAA TGTTTTGGTTCCCTG TERM 2697 3967715 - 3967740 + T 100 -19.1 -3.82321 | opp_overlap 3967715, overlap 3967713 AGGCGGCGGATAAAA TTCTCGGCCGG AACT CCGGCCGAGAA TGTTTTGGTTCCCTG BRADO3796 3968793 - 3968020 - | hypothetical protein BRADO3797 3969873 - 3968845 - | putative carboxylase, like RuBisCO, small subunit BRADO3798 3970607 - 3969876 - | putative carboxylase TERM 2698 3971499 - 3971481 - g 72 -7.3 -4.18934 | opp_overlap 3971481 GACGAGGTGAACAAA GGCGCGG TCCTG CCGGGCC TGTATCCGATGAACG BRADO3799 3970854 - 3971552 + | hypothetical protein BRADO3800 3971595 - 3972008 + | hypothetical protein TERM 2699 3972031 - 3972054 + T 100 -17.4 -4.54727 | overlap 3972051 CTGACAGGATGTCGG GCGCGCGGTC GCAA GGCCGCGCGC TTTTGCTTTGGAGCA BRADO3801 3973033 - 3972077 - | putative signal peptide BRADO3802 3973547 - 3973059 - | AsnC/Lrp family transcriptional regulator TERM 2700 3974434 - 3974406 - g 73 -13.1 -3.30771 | opp_overlap 3974412, overlap 3974408 GCAGATCGTCGACAA CACCGCCGAGCTC GTC GAGCTCGGCCGCA AGGTGCGCGACGACG TERM 2701 3974432 - 3974408 - g 80 -15.7 -3.22102 | opp_overlap 3974412, overlap 3974406 AGATCGTCGACAACA CCGCCGAGCTC GTC GAGCTCGGCCG CAAGGTGCGCGACGA BRADO3803 3973681 - 3974700 + | 1-aminocyclopropane-1-carboxylate deaminase TERM 2702 3975910 - 3975955 + F 83 -14.6 -3.40403 | opp_overlap 3975896 ACGATAGCCAGCACC GGGAGTCTCGCTAGCGCGTC CGTCGA GGCGTGCTTGCGCGCCTCCC TTCTGATGCCGGACG fusA 3976161 - 3978182 + | protein chain elongation factor EF-G, GTP-binding TERM 2703 3978191 - 3978221 + T 85 -15.5 -3.43564 | opp_overlap 3978192, overlap 3978192 3978194 GGCGTGACGACAACA AGAGATGAGCGGC GAGCA GCCGCTCATCTCA TTCTCGCTTCAATTC TERM 2704 3978220 - 3978192 - T 100 -19 -3.84406 | opp_overlap 3978192 3978191 3978194 GCGTGACGACAACAA GAGATGAGCGGC GAGCA GCCGCTCATCTC ATTCTCGCTTCAATT TERM 2705 3978192 - 3978220 + T 87 -19 -2.65656 | opp_overlap 3978192, overlap 3978191 3978194 GCGTGACGACAACAA GAGATGAGCGGC GAGCA GCCGCTCATCTC ATTCTCGCTTCAATT TERM 2706 3978194 - 3978218 + T 79 -15.8 -2.86539 | opp_overlap 3978192, overlap 3978192 3978191 GTGACGACAACAAGA GATGAGCGGC GAGCA GCCGCTCATC TCATTCTCGCTTCAA BRADO3807 3978727 - 3978230 - | putative acetyltransferase BRADO3808 3979817 - 3978753 - | putative high-affinity nickel-transporter (yohM-like protein) BRADO3809 3980103 - 3979825 - | putative yohL-like protein BRADO3810 3981056 - 3980235 - | cyclohexadienyl dehydratase precursor BRADO3811 3981129 - 3981644 + | hypothetical protein TERM 2707 3981681 - 3981661 - T 77 -14 -3.32022 | opp_overlap 3981656, overlap 3981645 GCCTTCAGAGACGAA TGGCCGGC GCAAG GCCGGCCA TGACGATGTCGTCGC BRADO3812 3982065 - 3981718 - | hypothetical protein BRADO3813 3983300 - 3982302 - | putative phosphoglycerate dehydrogenase ugpC 3984429 - 3983329 - | sn-glycerol 3-phosphate ABC transporter ATP-binding protein TERM 2708 3984210 - 3984248 + g 74 -15.3 -2.62983 | gap 1, overlap 3984210 TCGCGATGTCGCGGT CCTTCGGCGGC-ACATCG TTGA CGACGTCGCCGCCGATGG TGATGTCGCCGTCGG BRADO3815 3985360 - 3984449 - | ABC transporter permease protein BRADO3816 3986298 - 3985360 - | putative permease protein of sugar ABC transporter BRADO3817 3987776 - 3986412 - | ABC transporter substrate-binding protein, periplasmic component BRADO3818 3988243 - 3988926 + | hypothetical protein TERM 2709 3989764 - 3989747 - g 70 -9.8 -3.74693 | opp_overlap 3989738 GGTGAGCGGACGAAA GCCGGC CATGAC GCCGGC TGTCCGACCGTTCCA BRADO3819 3989612 - 3989815 + | hypothetical protein BRADO3821 3990059 - 3990328 + | hypothetical protein BRADO3822 3990328 - 3991179 + | rare lipoprotein A family protein (rlpA) BRADO3823 3994551 - 3991267 - | hypothetical protein TERM 2710 3993655 - 3993679 + g 72 -13.5 -3.16039 | GGACGTGCTTCCGAA CCTGACTGCGG AGG CCGCGGCCAGG TTGGTGCCGGTGATT BRADO3824 3994877 - 3995251 + | hypothetical protein BRADO3825 3996156 - 3995248 - | epoxide hydrolase BRADO3826 3996470 - 3997624 + | putative Serine-type D-Ala-D-Ala carboxypeptidase tmk 3997629 - 3998309 + | thymidylate kinase BRADO3828 3998306 - 3999346 + | DNA polymerase III subunit delta' TERM 2711 4000550 - 4000528 - g 82 -15.6 -3.40403 | opp_overlap 4000512, overlap 4000507 CGCGCTGTACGAGAA CCAGCCCGAT TTC ATCGGGCCGG ATGCGCGGCGCAACG BRADO3829 3999416 - 4001533 + | methionyl-tRNA synthetase BRADO3830 4001533 - 4002324 + | putative deoxyribonuclease (ycfH) BRADO3831 4002321 - 4003121 + | hypothetical protein TERM 2712 4003220 - 4003239 + F 70 -10.6 -3.53811 | CCCGATGGTGGGCAC GCGTCGCC TGAC GGCGCCGC TTTGCCCACCCTACG BRADO3832 4003296 - 4003925 + | hypothetical protein BRADO3833 4005768 - 4004125 - | acyl-CoA synthetase BRADO3834 4007683 - 4005797 - | TRAP-type C4-dicarboxylate transporter small and large permease TERM 2713 4006745 - 4006697 - G 86 -16.5 -3.54424 | overlap 4006702 CTTCATCTCGGGAAA CAGCACCGGCGCGACCGCGGCCA TGT CGGCCGCCTTGGCGCCGGAGATG CCGGAGACGAGATAC TERM 2714 4006740 - 4006702 - G 86 -18 -2.84325 | overlap 4006697 TCTCGGGAAACAGCA CCGGCGCGACCGCGGCCA TGT CGGCCGCCTTGGCGCCGG AGATGCCGGAGACGA BRADO3835 4008714 - 4007719 - | putative TRAP-type C4-dicarboxylate transport system, periplasmic component (dctP-like) TERM 2715 4008164 - 4008144 - G 80 -16.9 -2.64155 | overlap 4008129 4008141 4008140 CCTCGCTGAAATTGA TCGAGGCGG GCG CCGCCTCGA ACGCCTTGAACATCG TERM 2716 4008743 - 4008759 + H 70 -7.3 -4.10566 | overlap 4008755 GACAGGCTCATTCTC GTTTCTC CCT GAGAAGC TTCTTCTTGTTGCAT TERM 2717 4010012 - 4010065 + G 70 -10.8 -3.58533 | overlap 4010013 ACGGTCGGCGCGGCG GCGCGGCTCGCGGCGCCGCGGCC-GC CTCA GCAGGTTCCGGCG-CGCGCTCCGCGG TTTCCGAACTTCTGA BRADO3836 4009214 - 4010080 + | hypothetical protein BRADO3837 4011640 - 4010171 - | putative ABC transporter ATP-binding protein BRADO3838 4012566 - 4011637 - | putative branched-chain amino acid ABC transporter, permease protein TERM 2718 4012091 - 4012053 - G 72 -13.8 -3.05343 | opp_overlap 4012051 GGGACAGGCCGAACA GGATGGCGCCCGACACCA GCA TGAAGCCGAGCGCGATCC AGTAGTTCGTCTTGG BRADO3839 4013444 - 4012569 - | branched chain amino acid ABC transporter permease TERM 2719 4013508 - 4013485 - R 100 -15.2 -4.72497 | overlap 4013486 GATGCATCAAGAAAA TGGGCCGCCC TTGC GGGCGGCCCC ACGATGCGTCAGTTG TERM 2720 4013507 - 4013486 - R 95 -18.7 -3.42775 | overlap 4013485 ATGCATCAAGAAAAT GGGCCGCCC TTGC GGGCGGCCC CACGATGCGTCAGTT BRADO3840 4014803 - 4013517 - | putative branched-chain amino acid ABC transporter (substrate-binding protein) BRADO3841 4015040 - 4014822 - | hypothetical protein TERM 2721 4015336 - 4015323 - H 75 -3.7 -4.81359 | overlap 4015324 AATTCAAATAGAAAA GCGGC GTCG GCGGC GGACGTACAGGGTTT BRADO3842 4015362 - 4016207 + | hypothetical protein TERM 2722 4016242 - 4016267 + T 91 -19.1 -3.01497 | opp_overlap 4016229, overlap 4016237 CAGCCGGTGACCCTT TCAGCAGCGGC CGCA GCCGCTGCTGA TGTCGTTTGGCGTCA BRADO3843 4017167 - 4016280 - | hypothetical protein TERM 2723 4016924 - 4016970 + g 75 -14.3 -3.29461 | gap 1, overlap 4016928 CAGTCGCGGGCTTGG GCTCGTCGGCGGCAGCCGCCGC CGGT GCGGTGGCCGGC-TCGGCGGGC TTGTCCGCCGACTTC TERM 2724 4016928 - 4016982 + g 86 -17.1 -3.31144 | overlap 4016924 4016973 CGCGGGCTTGGGCTC GTCGGCGG-CAGCCGCCGCCGGTGCGG TGG CCGGCTCGGCGG-GCTTGTCCGCCGAC TTCTCCGCCTCGGCA BRADO3844 4018888 - 4017428 - | putative Beta-glucosidase nthA 4019083 - 4019718 + | nitrile hydratase subunit alpha (Nitrilase) (NHase) TERM 2725 4020179 - 4020225 + G 77 -15.6 -3.01712 | GCGGCTGCCGCGCTA CGTGCGCGGCCATGTCGGCCGC ATC GAGGCCGTCCGGGGCGTGCACG TGTTCCCGGACAGCA nthB 4019718 - 4020377 + | nitrile hydratase subunit beta (Nitrilase) (NHase) BRADO3847 4020374 - 4020763 + | hypothetical protein BRADO3848 4020931 - 4021764 + | hypothetical protein TERM 2726 4021799 - 4021817 + T 95 -16 -3.92075 | ATTCTCGATCTGACG CGGGGCCT TGA AGGCCCCG TTTCTGCGTCAGGCT BRADO3849 4022572 - 4021826 - | putative ExsB TERM 2727 4022574 - 4022600 + H 100 -18.7 -4.18018 | overlap 4022594 TCTGGTCCGGCCAAC CCGCGCGCGGC GTCCG GCCGTGCGCGG TTTTCGCTGGGACGC TERM 2728 4023069 - 4023046 - g 85 -10.2 -4.2679 | gap 1, overlap 4023034 CAAGGCCGAGGAAAA GGCCG-AGCGC GCG GCGCGGCGGCC AGCCGAGGACCAGAG mazG 4022669 - 4023487 + | nucleoside triphosphate pyrophosphohydrolase BRADO3852 4023856 - 4023488 - | hypothetical protein TERM 2729 4023561 - 4023545 - G 72 -11.5 -3.53811 | overlap 4023492 CGCATGGCGCGCAAA GGCGCCG GTC CGGCACC CCAACGCCACAGCGG TERM 2730 4024933 - 4024945 + G 86 -4.7 -5.1244 | overlap 4024932 GACGTCTCATGACCC GGCCG TCG CTGCC TTTTTGTATTCCTGG TERM 2731 4025180 - 4025131 - g 100 -17.9 -3.79906 | opp_overlap 4025137 4025139, overlap 4025135 4025137 TGATCTCGATAACAA GAAATCCAGCGCGGGCAACGTCC CTTC GAACGCTCCCCGCGCTGTATGTC AGCCAGGCTCCAACA TERM 2732 4025176 - 4025135 - g 100 -17.3 -4.51812 | opp_overlap 4025137 4025139, overlap 4025131 4025137 CTCGATAACAAGAAA TCCAGCGCGGGCAACGTCC CTTC GAACGCTCCCCGCGCTGTA TGTCAGCCAGGCTCC TERM 2733 4025137 - 4025174 + G 76 -15.5 -2.87211 | opp_overlap 4025135 4025131 4025137, overlap 4025139 CGATAACAAGAAATC CAGCGCGGGCAACGTCC CTTC GAACGCTCCCCGCGCTG TATGTCAGCCAGGCT TERM 2734 4025174 - 4025137 - g 93 -19.9 -2.57496 | opp_overlap 4025137 4025139, overlap 4025135 4025131 CGATAACAAGAAATC CAGCGCGGGCAACGTCC CTTC GAACGCTCCCCGCGCTG TATGTCAGCCAGGCT BRADO3853 4024097 - 4026343 + | hypothetical protein TERM 2735 4026397 - 4026368 - T 86 -7.1 -5.055 | gap 1, opp_overlap 4026368 4026369 4026373, overlap 4026372 4026373 4026375 GCAAGGCCCAAAAAA GCAAGTAGGCCCGC GAG GCGGGCCTA-TGGA TTTCGTCGCACGATT TERM 2736 4026394 - 4026372 - T 86 -13.4 -3.93166 | opp_overlap 4026369 4026368 4026373, overlap 4026368 4026373 4026375 GGCCCAAAAAAGCAA GTAGGCCCGC GAG GCGGGCCTAT GGATTTCGTCGCACG TERM 2737 4026393 - 4026373 - T 87 -16.9 -2.95177 | opp_overlap 4026373 4026369 4026368, overlap 4026372 4026368 4026375 GCCCAAAAAAGCAAG TAGGCCCGC GAG GCGGGCCTA TGGATTTCGTCGCAC TERM 2738 4026373 - 4026393 + T 83 -16.9 -2.67803 | opp_overlap 4026372 4026368 4026373 4026375, overlap 4026369 4026368 GCCCAAAAAAGCAAG TAGGCCCGC GAG GCGGGCCTA TGGATTTCGTCGCAC TERM 2739 4026391 - 4026375 - T 81 -15.1 -3.0166 | opp_overlap 4026373 4026369 4026368, overlap 4026373 4026372 4026368 CCAAAAAAGCAAGTA GGCCCGC GAG GCGGGCC TATGGATTTCGTCGC TERM 2740 4026400 - 4026410 + T 74 -5.4 -4.57073 | GCGGGCCTATGGATT TCGT CGC ACGA TTTTTGCGCCAGATC BRADO3854 4027989 - 4026610 - | putative GTP-binding protein (hflX) hfq 4028249 - 4028001 - | RNA-binding protein Hfq ntrX 4029890 - 4028520 - | nitrogen assimilation regulatory protein ntrY 4032253 - 4029908 - | nitrogen regulation protein TERM 2741 4030967 - 4030987 + g 77 -11.1 -3.85698 | ATGATCGAGCACCTC CTGCTCGGC ATG GCCGATCAG TTTCTCGGCCGAACG TERM 2742 4031385 - 4031351 - G 73 -12.1 -3.36749 | gap 1, overlap 4031347 4031352 GACCGCGAACATCAA CGCCAGCGCCACCTGG ATGC CCAGGCGGCGC-GACT CGAGCTGGGTGTACT TERM 2743 4031384 - 4031352 - G 74 -15.6 -2.61728 | gap 1, overlap 4031351 4031347 ACCGCGAACATCAAC GCCAGCGCCACCTGG ATGC CCAGGCGGCGC-GAC TCGAGCTGGGTGTAC TERM 2744 4032171 - 4032137 - G 70 -8.5 -3.93236 | gap 1, overlap 4032129 4032148 GATGAAGGTCAGAAA CGCCGACAGCAGCGCG AGCC CG-ACCGCCACCGGCG CCAGCCAGGTGCGCC TERM 2745 4032329 - 4032379 + r 100 -18.5 -4.04318 | gap 1, opp_overlap 4032331 4032341, overlap 4032331 4032341 ACCACGCTGTTGCCA AATTGC-GACAAATCCACGGCGCG GAAG CGCGTCGCGGATTTGTCTGCAATA TTTCTCATCTGTGGC TERM 2746 4032377 - 4032331 - R 100 -21.1 -3.53224 | gap 1, opp_overlap 4032329 4032331 4032341, overlap 4032341 CACGCTGTTGCCAAA TTGC-GACAAATCCACGGCGCG GAAG CGCGTCGCGGATTTGTCTGCAA TATTTCTCATCTGTG TERM 2747 4032331 - 4032377 + r 100 -21.1 -3.61175 | gap 1, opp_overlap 4032331 4032341, overlap 4032329 4032341 CACGCTGTTGCCAAA TTGC-GACAAATCCACGGCGCG GAAG CGCGTCGCGGATTTGTCTGCAA TATTTCTCATCTGTG TERM 2748 4032341 - 4032366 + r 86 -12.5 -4.06148 | opp_overlap 4032331 4032341, overlap 4032331 4032329 CCAAATTGCGACAAA TCCACGGCGCG GAAG CGCGTCGCGGA TTTGTCTGCAATATT TERM 2749 4032366 - 4032341 - R 83 -12.5 -3.91072 | opp_overlap 4032341 4032331 4032329, overlap 4032331 CCAAATTGCGACAAA TCCACGGCGCG GAAG CGCGTCGCGGA TTTGTCTGCAATATT BRADO3858 4033190 - 4032456 - | IclR family transcriptional regulator TERM 2750 4032693 - 4032647 - G 75 -9.3 -4.07568 | CGCCGCTGGTGAAAA TCGGCGTGTCGATCTCCGCCG TGGCG CGGCCGCGATCGAAATGTCGA AGCACCTGGGCAATG TERM 2751 4033208 - 4033227 + r 70 -10.6 -3.54129 | CCTGATTCCCGAAGC CGACCGCC ATCG GGCGGCCG TTTCGAGAGGGTATA BRADO3859 4033963 - 4033283 - | hypothetical protein TERM 2752 4034063 - 4034049 - H 85 -2.8 -5.29782 | opp_overlap 4034049 GATACGTACAAAAAA TGCAAC GCC GTTTCA ATTTGAAAATTCGGC BRADO3860 4034170 - 4035177 + | putative D-3-phosphoglycerate dehydrogenase (PGDH) BRADO3861 4035210 - 4036547 + | MFS family tartrate transporter BRADO3862 4036549 - 4037490 + | putative exported protein; putative hydrolase TERM 2753 4037578 - 4037559 - g 72 -11.4 -3.54741 | gap 1 GATCATTTCCGCAAA GCCC-GGCG CAG CGCCTGGGC GGATGCGAACCAAGG BRADO3863 4037487 - 4038407 + | putative gluconolactonase BRADO3864 4039348 - 4038419 - | putative amidohydrolase; putative exported protein BRADO3865 4040664 - 4039345 - | major facilitator superfamily permease TERM 2754 4040741 - 4040755 + r 90 -8.6 -4.83615 | opp_overlap 4040741 GGCGAAAATTGAAAA TGCAAC GGT GTTGCA TTTTTCTAAGGGCTA TERM 2755 4040755 - 4040741 - R 84 -8.6 -4.4267 | opp_overlap 4040741 GGCGAAAATTGAAAA TGCAAC GGT GTTGCA TTTTTCTAAGGGCTA TERM 2756 4040910 - 4040934 + r 91 -12.2 -4.27617 | opp_overlap 4040910 CCCGTGCCACAGCAA TCTCCCCTGA CATGA TCGGGGGAGA TTTTCCTCGGATCTA ntrC 4042389 - 4040947 - | nitrogen assimilation regulatory protein ntrB 4043574 - 4042399 - | nitrogen regulation protein BRADO3868 4044524 - 4043571 - | putative tRNA-dihydrouridine synthase (nitrogen regulation protein nifR3) TERM 2757 4045471 - 4045457 - g 82 -11.4 -4.14392 | CCGGAACGTGCAAAA CTGCGC ATC GCGCAG ACGCCGCAGACTTTC ispDF 4044983 - 4046164 + | IspD/ispF bifunctional enzyme BRADO3870 4046471 - 4047085 + | putative competence-damage induced protein (CinA) BRADO3871 4047153 - 4047950 + | hypothetical protein BRADO3873 4048542 - 4048246 - | hypothetical protein TERM 2758 4048652 - 4048634 - g 100 -12.4 -5.4505 | overlap 4048616 4048613 GCCGGCAATAAAAAA GCCGCCAA GTC CTGGCGGC TGATCGGATCACTTG BRADO3874 4048553 - 4048741 + | hypothetical protein BRADO3875 4049393 - 4048836 - | putative guanosine polyphosphate pyrophosphohydrolases/synthetases TERM 2759 4049499 - 4049481 - H 74 -5.9 -4.42386 | overlap 4049483 GGCCGAGCGACAAAA TAGCCCG CCCGT CGGGCAA ATCGGCGATACAGCC BRADO3877 4050238 - 4051500 + | putative methyl-accepting chemotaxis protein TERM 2760 4051532 - 4051564 + T 75 -11.9 -3.55761 | opp_overlap 4051534, overlap 4051534 4051535 TGAGGTCCGCGATCA GACCCGCTCCGCGAC GAT GTCGCGGAGCAGCTG TTTGAAACGTGGATA TERM 2761 4051562 - 4051534 - T 81 -16.7 -2.78463 | opp_overlap 4051534 4051532 4051535 AGGTCCGCGATCAGA CCCGCTCCGCGAC GAT GTCGCGGAGCAGC TGTTTGAAACGTGGA TERM 2762 4051534 - 4051562 + T 82 -14.5 -3.35597 | opp_overlap 4051534, overlap 4051532 4051535 AGGTCCGCGATCAGA CCCGCTCCGCGAC GAT GTCGCGGAGCAGC TGTTTGAAACGTGGA TERM 2763 4051535 - 4051561 + T 86 -18 -2.61144 | opp_overlap 4051534, overlap 4051534 4051532 GGTCCGCGATCAGAC CCGCTCCGCGAC GAT GTCGCGGAGCAG CTGTTTGAAACGTGG TERM 2764 4051796 - 4051779 - T 73 -12.7 -3.21099 | CCCTGTGATTATGAA TCCCCGC TTTC GCGGGGA TGACGGCTGTGGGTG BRADO3878 4052327 - 4051854 - | hypothetical protein lipA 4053297 - 4052338 - | lipoyl synthase TERM 2765 4053105 - 4053133 + g 71 -12.4 -3.28924 | CGATGTTCGGGCAGC CGGCCTCCTCGC ACACG GTGACGAGGCCG TTCTCGCGGACGATG TERM 2766 4053462 - 4053446 - H 72 -4.3 -4.60255 | AGAATGGCGCAAAAA CCGGCAA AAA CTCCCGG AGTTTCACGGCCTCG BRADO3880 4053527 - 4054072 + | 3-methyladenine DNA glycosylase TERM 2767 4054119 - 4054077 - T 71 -13.5 -2.54193 | opp_overlap 4054081 4054085, overlap 4054081 GAGGAGCGTAAGCGA CGAAGCGATCCAGGGGC TGCGCGTGG GACCCTGGATTGCTTCG CTACGCCGCTACGCT valS 4057118 - 4054161 - | valyl-tRNA synthetase TERM 2768 4056168 - 4056201 + g 71 -12.3 -3.31144 | overlap 4056136 4056133 GAAATCGTTGAAGTC GTGCGCCGGCGTGAT CTTG ACCGCGCCGGTGCCC TTCTCCGGGTCGGAA BRADO3882 4058077 - 4057328 - | hypothetical protein TERM 2769 4057742 - 4057776 + g 73 -11.3 -3.72576 | overlap 4057743 4057745 TTCTGGTTCGGGCTC GGGTTGCGCCGGCTG AACCG CTGCCGGCGCAGTCG TTTCATCCAAACCCG TERM 2770 4057743 - 4057775 + g 73 -14.8 -2.83403 | overlap 4057742 4057745 TCTGGTTCGGGCTCG GGTTGCGCCGGCTG AACCG CTGCCGGCGCAGTC GTTTCATCCAAACCC TERM 2771 4057745 - 4057773 + g 72 -13.8 -2.96695 | overlap 4057743 4057742 TGGTTCGGGCTCGGG TTGCGCCGGCTG AACCG CTGCCGGCGCAG TCGTTTCATCCAAAC TERM 2772 4058433 - 4058411 - R 100 -13.4 -5.60993 | opp_overlap 4058411 TGTGCCATAAAAAAA TCCCCCGGCC AAG GACCGAGGGA TCTGCTTCGATAGTT BRADO3884 4059844 - 4058459 - | putative outer membrane protein tolC precursor BRADO3885 4060795 - 4060130 - | putative protein-L-isoaspartate O-methyltransferase TERM 2773 4060394 - 4060342 - G 70 -12 -3.40403 | gap 2 CCCCGTTCAGGAGAA TCACGTCGAAGCGGCCGTCCGCCGGA TCA CCCTGC--ACGGCCGGTGCGACGCGA ATCGTGATCGGGCAG BRADO3886 4061128 - 4060943 - | hypothetical protein TERM 2774 4061365 - 4061380 + r 71 -9 -3.73647 | TACGCAGCGCCGTTC GCGAAG TTTG CTTCGC TTGTTCCTCGGTAGC BRADO3887 4062423 - 4062238 - | hypothetical protein TERM 2775 4062514 - 4062531 + H 76 -14.1 -3.19192 | opp_overlap 4062512 CATGGTCGATATATC GCGCGGC GACA GCCGCGC TTGCATTCCGTCGAA TERM 2776 4062608 - 4062570 - H 81 -16.6 -2.73483 | ATTCGACGTGAAGCA CCGGGCGCGCACTAGGTC TCC AAGCGTGTGCGCGCCCGG GCAGCTATCAAGCGC BRADO3889 4062880 - 4063188 + | hypothetical protein BRADO3890 4063181 - 4063609 + | hypothetical protein BRADO3891 4063722 - 4063985 + | hypothetical protein BRADO3892 4064428 - 4064931 + | putative NUDIX-like hydrolase (modular protein) BRADO3893 4064957 - 4065802 + | hypothetical protein BRADO3894 4066002 - 4066448 + | putative two-component response regulatory protein, response regulator receiver BRADO3895 4066445 - 4066861 + | putative two-component response regulatory protein, response regulator receiver BRADO3896 4067168 - 4067347 + | hypothetical protein TERM 2777 4067424 - 4067450 + T 76 -10.1 -3.82946 | gap 1 CGGGACAGCACCGCT CGCCGCGCGTCG ATGA TGG-GCGCGGCG TTCTCTTTCCCCTCG TERM 2778 4067518 - 4067556 + T 100 -21.7 -3.69373 | opp_overlap 4067510 4067527 TGATACACCTCCGGC GCCGACATAGCGGCGGC ACGCG GCCGCCGCCACGTCGGC TTCTTCAGCTATTTC TERM 2779 4067547 - 4067527 - T 79 -15.4 -2.87132 | opp_overlap 4067518, overlap 4067510 TCCGGCGCCGACATA GCGGCGGC ACGCG GCCGCCGC CACGTCGGCTTCTTC BRADO3897 4069307 - 4067565 - | putative alcohol dehydrogenase (acceptor) TERM 2780 4068040 - 4068011 - G 75 -15.7 -2.70932 | opp_overlap 4067975 4067974 4068018 GCTGTCCCGGAACCA GCGGCAGCTTCTC GCCG GTGAAGCCGCCGC AGAAGTTCTCATTGG TERM 2781 4069346 - 4069367 + r 74 -10.2 -3.68351 | overlap 4069345 GTTCGCTTCTTTGCT CGTCGTGA CGATGT TCACGACG TTTGGGTCGTGACGA BRADO3898 4070045 - 4069413 - | hypothetical protein BRADO3899 4070681 - 4070547 - | hypothetical protein BRADO3900 4070716 - 4072368 + | hypothetical protein TERM 2782 4072789 - 4072813 + T 75 -13.5 -3.05596 | opp_overlap 4072776 4072777 AACCCGGCGTTTACG GCCGCGCCAGT TGG GCTTGCGCGGC TTCGGTCGCGGCGTA BRADO3901 4073511 - 4072771 - | hypothetical protein mdtC 4076655 - 4073551 - | multidrug ABC transporter mdtB 4079783 - 4076655 - | multidrug ABC transporter TERM 2783 4076728 - 4076701 - G 74 -12.6 -3.59979 | opp_overlap 4076693 GGCGGCGACGGCAAA TCGGGCGCGGGC GGCA GCGCGCGCTCGA AGCGGCGGTTGATGC TERM 2784 4078081 - 4078111 + g 71 -14.1 -2.82933 | gap 1, opp_overlap 4078073, overlap 4078075 4078110 AACGACACGTCCGGC CCGGCTTCGGTCAC GGCG GTGATCGA-GCCGG TGTCCTGCATTGGCA mdtA 4081217 - 4079814 - | multidrug ABC transporter TERM 2785 4080864 - 4080878 + g 72 -7.1 -4.18934 | opp_overlap 4080848 CGCCGGATCGATCTC GGCGA GCACA TCGCC TTTCTTGACGTCCTG BRADO3905 4082730 - 4081207 - | multidrug efflux system outer membrane subunit BRADO3906 4083027 - 4084340 + | hypothetical protein BRADO3907 4084348 - 4085184 + | hypothetical protein TERM 2786 4086315 - 4086326 + G 72 -4.4 -4.57341 | overlap 4086284 TTGGCATCCCCGTCA TTCG CGAG CGAA TTTTTGGGGAAGATT BRADO3908 4085291 - 4086523 + | putative cyclopropane-fatty-acyl-phospholipid synthase (Cfa-like) TERM 2787 4087244 - 4087210 - g 83 -4.3 -4.98255 | opp_overlap 4087226 TCTGAAGGAGAAAAA CGC-CGGCATCGTCACA GCC TGCGCCGAT-CCGCACG GCTTTGCGATGTACA cysB 4086608 - 4087642 + | cysteine synthase A BRADO3910 4088515 - 4087772 - | putative amino acid transport protein, ATP-binding protein BRADO3911 4090061 - 4088541 - | putative amino acid ABC transport, permease protein BRADO3912 4091313 - 4090108 - | putative amino acid transport protein, permease protein TERM 2788 4091080 - 4091110 + g 70 -11.1 -3.61398 | overlap 4091083 GCCGGAGTAGCTGAT CAGGGCCTGGTTC ACGTC GAACCCGGCCGTG TTGTTGAGGAACCCG BRADO3913 4092358 - 4091342 - | putative amino-acid ABC transporter, substrate-binding protein metC 4092676 - 4093869 + | cystathionine beta-lyase, PLP-dependent (beta-cystathionase) TERM 2789 4095450 - 4095423 - g 70 -12 -3.40403 | gap 1, overlap 4095424 CCTGCTCGACCAGAA GGCCGAGCTCCGC AAT GCCGAGCTCG-CC GCCACCGAGCGGCAC BRADO3915 4093990 - 4095687 + | putative Na+/phosphate transporter; putative membrane protein BRADO3916 4096249 - 4095908 - | putative Lipid A disaccharide synthase BRADO3917 4096983 - 4096246 - | glycosyl transferase family protein BRADO3918 4097869 - 4097078 - | putative phosphoesterase, PA-phosphatase related (membrane associated) BRADO3919 4099612 - 4097870 - | glycosyl transferase family protein pbpC 4101868 - 4099664 - | penicillin-binding protein 1C (PBP-1C); penicillin-insensitive transglycosylase (peptidoglycan TGase)(N-terminal); transpeptidase-like module (C-terminal) BRADO3921 4107163 - 4101932 - | putative bifunctional alpha-2-macroglobulin/protein prenyltransferase TERM 2790 4102430 - 4102448 + g 80 -16 -3.27923 | opp_overlap 4102423 CGAGACCACCGCCTG CACCGGCG CCT CGCCGGTG TTGGTGATCTTCAGC TERM 2791 4102837 - 4102789 - G 73 -15.2 -2.94099 | gap 2 CGGCGGCACCATAGA CCCG-CTCGGCGCGGGCGC-GGTC GCC GACCAGCGCGAGCGCCGCGGCGAG CTGCGCCTTGGCAAT TERM 2792 4107579 - 4107545 - R 84 -17 -2.71144 | opp_overlap 4107567 GACCCGTGCTAAGGA TTCCGCGCCGGCCGGC CCC GCCCGCCGGCGCCGAT CCCGTGAACCGGCCG BRADO3923 4108049 - 4107780 - | hypothetical protein BRADO3924 4108238 - 4108498 + | hypothetical protein BRADO3925 4108687 - 4108508 - | hypothetical protein TERM 2793 4108732 - 4108690 - R 93 -18.4 -3.35679 | opp_overlap 4108723 CGCGGTCATGCACAA TGACCTCGACGCCGGCGGGT GGA AGCCGTCGGCGCCAAGGCCA GACATCAGGTCAAAT BRADO3926 4108882 - 4108742 - | hypothetical protein TERM 2794 4108815 - 4108839 + g 71 -15 -2.64933 | ATCACCACGGCGGCA CCGGTACCGG GTAAA CCGGTGCCGG TGATGTCGATGGGTC BRADO3927 4110032 - 4109646 - | resolvase BRADO3928 4110316 - 4109984 - | resolvase BRADO3930 4111973 - 4111059 - | hypothetical protein BRADO3931 4112815 - 4112381 - | hypothetical protein BRADO3932 4113449 - 4113048 - | hypothetical protein TERM 2795 4114322 - 4114345 + G 84 -5.2 -4.96848 | gap 1 ACCTTCGCGCTTCTG CTCGGCCTCGG CTA TCGCGG-CGAG TTTTTGTCTCGGGGC BRADO3933 4113749 - 4114486 + | putative methyltransferase FkbM BRADO3934 4114705 - 4114800 + | hypothetical protein TERM 2796 4114911 - 4114940 + F 81 -4.4 -5.09173 | AATTGACGCCCGCGC CTTCATTCGC-CAC CTCA GTGCGCGA-TGGAG TTTTTTGAAATGTTC BRADO3935 4114950 - 4115111 + | hypothetical protein BRADO3936 4115373 - 4115161 - | hypothetical protein BRADO3937 4116088 - 4115615 - | putative signal peptide BRADO3939 4116953 - 4117306 + | hypothetical protein BRADO3940 4117551 - 4117706 + | hypothetical protein BRADO3941 4117993 - 4118268 + | hypothetical protein BRADO3942 4118688 - 4118308 - | hypothetical protein TERM 2797 4118761 - 4118783 + r 72 -13.4 -2.78463 | overlap 4118740 CCGCGTGGCCTCATG CGACGGCGAC GTG GTGGCCGTCG TCTGGTGCGCCCGCT BRADO3943 4119111 - 4118893 - | hypothetical protein BRADO3944 4119356 - 4120369 + | oxidoreductase NAD(P)-binding subunit BRADO3945 4120732 - 4120538 - | hypothetical protein TERM 2798 4121229 - 4121203 - gH 85 -14.5 -3.63627 | gap 1 TCTCGACACTGCAAA GAGCCC-GCTGC CGAT GCAGCAGGGCTC CCACCGTCACGGCAA TERM 2799 4121996 - 4121982 - gH 71 -12.8 -3.05384 | TCGCCTCCGAGGTAA CGCGCG TCG CGCGCG AGGTCGGCACGGACG TERM 2800 4123435 - 4123414 - gH 78 -12.3 -3.70902 | gap 1 TGGCGGACAGGCAAA CGTGCCTGGC GTC GCC-GGCACG TGGAAGGATCTCACC TERM 2801 4123958 - 4123943 - gH 70 -11.8 -3.17392 | GAGGTCGGAACCGAA GGCCGC CTCG GCGGCC AGGCCGTGGTGCCCG TERM 2802 4125808 - 4125827 + GH 75 -12.2 -3.54459 | opp_overlap 4125803 CTCCAAGCGATTGCA GCAGGTTC TGAA GAACCTGC TTTCGAACGCCTTCA BRADO3946 4121123 - 4127476 + | sensor histidine kinase BRADO3947 4127448 - 4128983 + | sensor histidine kinase BRADO3948 4131281 - 4128996 - | formate dehydrogenase TERM 2803 4131486 - 4131517 + r 93 -20.2 -2.90075 | CTCCGTGTGGACTGC GGCCCAGCGTTCGA CCCC TCGGGCGCTGGGCC TGTCCTTGGACGAGG BRADO3949 4132127 - 4131567 - | putative intracellular proteinase TERM 2804 4131875 - 4131846 - G 73 -14.3 -3.14344 | gap 1, opp_overlap 4131839 GATGTCCTTGATGAA CTGCAGCGCCTTCG GCT CGA-GGCGCAGCAG ATCCGGATTGATCTG TERM 2805 4132097 - 4132108 + g 79 -4.4 -4.76892 | overlap 4132089 AACCGTTGGTCGCGA GGAT CGCA ATCC TTTTTCCCTTGATGT BRADO3950 4132410 - 4132640 + | hypothetical protein BRADO3951 4132758 - 4132949 + | hypothetical protein BRADO3952 4133062 - 4133349 + | hypothetical protein BRADO3953 4134741 - 4133392 - | putative Beta-hexosaminidase TERM 2806 4134397 - 4134374 - G 74 -10.2 -3.78953 | ACGCCGACGATCAAA CCCTGCCGCG CGAG CGCAGCAGCG TCCTCCAACGACGTA TERM 2807 4134873 - 4134925 + H 81 -15.1 -3.05384 | CAGGGCTGGTGGGCA GCGGCT-GCACGTGGCCGCGCC-ATGG TGG TCATCGGC-CGG-CACGTGCCGGCCGC TTCGCTGCCACAAGG BRADO3954 4134950 - 4136431 + | hypothetical protein TERM 2808 4136661 - 4136685 + G 75 -2.8 -4.83169 | gap 1 CTGCCGGCGCATCCG CAGGA-CGTCG CAGG TGCCGATCCTG TTTTTGTCGGCGCGT BRADO3955 4136455 - 4137150 + | OmpR family two-component transcriptional regulator TERM 2809 4137225 - 4137243 + G 76 -2.2 -4.89477 | overlap 4137226 CTGGCGCTCGTCGCC ACCCTGCC GCT GGTCGGGC TTTTCTTCTTCCGCA TERM 2810 4137700 - 4137684 - g 72 -4.3 -4.54727 | overlap 4137686 4137688 GCGTTGAAAGGAAAA TACAGCG CCG CGCTGCG CATCCGCATTCCGGA TERM 2811 4137698 - 4137686 - g 71 -9.1 -3.88396 | overlap 4137684 4137688 GTTGAAAGGAAAATA CAGCG CCG CGCTG CGCATCCGCATTCCG BRADO3956 4137147 - 4138745 + | putative two-component system histidine kinase BRADO3957 4139094 - 4140710 + | putative ABC transporter, extracellular substrate binding protein TERM 2812 4140753 - 4140777 + G 76 -14.9 -3.18735 | overlap 4140754 4140757 CGCATCTTGAGCCTT GCGGGGCGGCG GCT CGCCGCCTCGA TTCCTACCCTGTTCC TERM 2813 4140754 - 4140776 + G 87 -18.4 -2.5092 | overlap 4140753 4140757 GCATCTTGAGCCTTG CGGGGCGGCG GCT CGCCGCCTCG ATTCCTACCCTGTTC TERM 2814 4140757 - 4140773 + G 71 -15.1 -2.56914 | overlap 4140754 4140753 TCTTGAGCCTTGCGG GGCGGCG GCT CGCCGCC TCGATTCCTACCCTG BRADO3958 4140735 - 4141712 + | putative ABC transporter, permease protein BRADO3959 4141714 - 4142544 + | putative ABC transporter, permease protein BRADO3960 4142541 - 4144175 + | putative ABC transporter, ATP-binding protein BRADO3961 4145489 - 4144179 - | putative FAD dependent oxidoreductase BRADO3962 4145639 - 4146496 + | hypothetical protein TERM 2815 4146506 - 4146536 + T 91 -16.1 -3.56325 | overlap 4146507 GGTTAGCCGGGAAGT TGTTGCGGCCGCG AGCTC CGCGGCCGCGGCG TTCTCATTCTGCCGG TERM 2816 4146507 - 4146535 + T 84 -17.4 -2.73474 | overlap 4146506 GTTAGCCGGGAAGTT GTTGCGGCCGCG AGCTC CGCGGCCGCGGC GTTCTCATTCTGCCG BRADO3963 4147577 - 4146540 - | putative ferredoxin--NAD(+) reductase BRADO3964 4149613 - 4147577 - | hypothetical protein TERM 2817 4150317 - 4150334 + H 71 -5.5 -4.36914 | CAACCAGTCTCGCGC TCTGCGG CCTC CCGGAGA TTTTCTCCCGCAGCG BRADO3966 4150562 - 4152316 + | toxin/protease ABC transporter ATP-binding protein TERM 2818 4152524 - 4152502 - g 72 -11.9 -3.62046 | CGACGGCGGCAAGAA GCGGCGGCG TCCAC CGCCGGCGC AGACGCGCGTCAAGC TERM 2819 4153193 - 4153159 - g 71 -12.1 -3.2614 | overlap 4153168 CATCGCCGAGATCAA GGTCGACAACGGCAA GCGCG TCGCCGCCGGCGACC TGCTCGTCCGGCTCG BRADO3967 4152320 - 4154254 + | HlyD family secretion protein BRADO3968 4154316 - 4156445 + | TPR repeat-containing protein TERM 2820 4156832 - 4156806 - f 74 -13.6 -2.94099 | overlap 4156821 TGCTTCGACCATATA GCCGCGTGCGAC AAA GTAGCGCGCGGC GAGGGACCGCGCGAC TERM 2821 4156849 - 4156821 - f 76 -10.2 -3.85698 | overlap 4156806 GCCGCGTGCGACAAA GTAGCGCGCGGC GAGGG ACCGCGCGACAC AGCGGCGCACGGACG BRADO3970 4156983 - 4160228 + | hypothetical protein TERM 2822 4160312 - 4160257 - f 75 -14.8 -2.78463 | opp_overlap 4160271, overlap 4160280 4160283 ATTCTGCTCACGACA GTCACGTTGCGAGAGCGCCAGAAGGA GTCC TCCTCCTGGCGCTCTCATAAGAGAAC AAAGGGAAGGACCGG TERM 2823 4160271 - 4160298 + F 78 -15.6 -2.78384 | opp_overlap 4160257 4160280 4160283 AGTCACGTTGCGAGA GCGCCAGAAGGA GTCC TCCTCCTGGCGC TCTCATAAGAGAACA BRADO3971 4160792 - 4162633 + | hypothetical protein TERM 2824 4162653 - 4162695 + F 76 -12.6 -3.53012 | overlap 4162660 GTCCGCGACGCATTC TCGCTTCCGCCGGCACAGAT TGC ATCTGTGCCGGCGTTGTCGC TTTCGGGAGCAAGCG TERM 2825 4162660 - 4162688 + F 100 -23.3 -3.47349 | overlap 4162653 ACGCATTCTCGCTTC CGCCGGCACAGAT TGC ATCTGTGCCGGCG TTGTCGCTTTCGGGA BRADO3973 4162860 - 4167092 + | TPR repeat-containing protein TERM 2826 4167477 - 4167498 + F 77 -13.7 -3.36273 | gap 1, overlap 4167484 CGATCGGCACGGACG GCCGGCCGCG AGC CGC-GCCGGC TTGCTCTTCACCCAA BRADO3974 4167710 - 4168303 + | putative methionyl-tRNA formyltransferase BRADO3975 4168597 - 4168947 + | hypothetical protein TERM 2827 4168997 - 4168976 - f 77 -13 -3.54424 | opp_overlap 4168976 CTGGACCCCTTCAAA CGGCGGCT CTCGAT AGCCGCCG TTTTGATGTCGACGC TERM 2828 4168976 - 4168997 + F 95 -13 -4.34402 | opp_overlap 4168976 CTGGACCCCTTCAAA CGGCGGCT CTCGAT AGCCGCCG TTTTGATGTCGACGC TERM 2829 4169401 - 4169374 - g 72 -12 -3.61715 | gap 1 CACCCGCGGCAATAA GCAGTCGGTCTCG ATC CGAG-CCGACAGC CAGTTCCGCGCAGCA BRADO3976 4169003 - 4169437 + | hypothetical protein BRADO3977 4169665 - 4169444 - | hypothetical protein BRADO3978 4169882 - 4170772 + | putative transmembrane protein TERM 2830 4171798 - 4171778 - g 73 -13.9 -3.17212 | CGACCACGGCAGCAA CCGCCGGCG CGA CGCCGGCTG CCGCAACCGCGAGCC TERM 2831 4172167 - 4172193 + G 77 -7.1 -4.57073 | opp_overlap 4172157 ATGAAGCGCTGGCAG GCCGCGCGGGG CTTTC CCTCGACCGGC TTTTTGACCAAGCTG BRADO3979 4170982 - 4172448 + | putative peptidase (caspase-like) TERM 2832 4172499 - 4172472 - f 93 -18.4 -3.28712 | opp_overlap 4172474, overlap 4172474 TTTCTTTCCGCAGAA CAGCCCGCGCCG GCAT CGGCGCGGGCTT TTTGCTGTCCGGACT TERM 2833 4172474 - 4172497 + F 100 -21 -4.8048 | opp_overlap 4172472 4172474 TCTTTCCGCAGAACA GCCCGCGCCG GCAT CGGCGCGGGC TTTTTGCTGTCCGGA TERM 2834 4172497 - 4172474 - f 95 -21 -3.21276 | opp_overlap 4172474, overlap 4172472 TCTTTCCGCAGAACA GCCCGCGCCG GCAT CGGCGCGGGC TTTTTGCTGTCCGGA TERM 2835 4172545 - 4172563 + F 72 -2.3 -4.8048 | overlap 4172547 CGCAACCATCGATTT GGCGTGG GCAAA TCACGGC TTTTTGGTGTAGAGA TERM 2836 4172563 - 4172621 + F 79 -9.1 -4.13767 | gap 2, opp_overlap 4172579 GTGGGCAAATCACGG CTTTTTGGTGTAGAG-ATGAT-GGCAGAC CTC GGCTGCCGATCATGCTCTCGACCAAGGAG TTTTCCGATGCGGGG BRADO3980 4172629 - 4174056 + | putative peptidase (caspase-like) BRADO3981 4175932 - 4174133 - | putative histidinase kinase-response regulator hybrid protein kaiC 4177465 - 4175936 - | circadian clock protein KaiC kaiB 4177775 - 4177443 - | circadian clock protein kaiB BRADO3984 4178611 - 4177772 - | hypothetical protein BRADO3986 4179248 - 4179009 - | hypothetical protein cysK 4180219 - 4179251 - | O-acetylserine sulfhydrolase A TERM 2837 4180611 - 4180658 + H 76 -7.8 -4.30719 | overlap 4180607 GACCTGCGTGCGAGA GCCTTTCGTATGAGAGCCTTTC GTAT GAGAGCCTTTCGTATGAGAGCC TTTCTTGTGAGAGCC BRADO3989 4180868 - 4181086 + | hypothetical protein TERM 2838 4181157 - 4181119 - T 73 -13.3 -3.14931 | gap 2, overlap 4181087 4181102 GCCACGCTGCATGAA CGTTCCACGACGCGATGCC GCT GTCATCGCGTCG-G-AACG ATCCGCAAGGCGTCA tgt 4182392 - 4181238 - | queuine tRNA-ribosyltransferase TERM 2839 4181665 - 4181644 - G 77 -12.9 -3.54653 | opp_overlap 4181643 ACGCCCATCAGATAA CGCGGCCGG TCGG CCGGCAGCG CCGGCACGGTGGCCT BRADO3991 4182590 - 4182408 - | hypothetical protein TERM 2840 4182556 - 4182530 - G 79 -8.6 -4.31692 | overlap 4182533 AACGCACGACGAAAA CCACCAAGCCCC AGG GGGACTCGGGAG GCGTGCGCGCGTAAT TERM 2841 4182603 - 4182627 + H 100 -8.6 -5.60993 | gap 2, opp_overlap 4182603 CATCTTCGAATCGAA GCCCC-G-CCTG ATG CAGGTCCGGGGC TTTTTTTATGCCCAA asd 4182666 - 4183691 + | aspartate-semialdehyde dehydrogenase (ASA dehydrogenase) (ASADH) TERM 2842 4183953 - 4184001 + T 93 -14.6 -4.09685 | gap 2 CGCGCAACGCGCTGA TCG-ACGGTGGGCA-CGCGTCGCC TTC GGCGCCGCTTTGCCCACCCTACGA TTTTGCGCCCTACGG queA 4185105 - 4184011 - | S-adenosylmethionine:tRNA ribosyltransferase-isomerase TERM 2843 4184533 - 4184551 + g 80 -17.4 -2.70932 | opp_overlap 4184519 GTGCAACCCGGCGGT GGGCGCGG CCA CCGCGCCC TCCTTGGCCGCGAAC BRADO3994 4185287 - 4185946 + | putative signal peptide ppiB 4186508 - 4186044 - | peptidyl prolyl cis-trans isomerase (rotamase B) ppiA 4187326 - 4186763 - | peptidyl-prolyl cis-trans isomerase A (rotamase A) coaD 4187876 - 4187382 - | phosphopantetheine adenylyltransferase TERM 2844 4187478 - 4187431 - G 73 -10.7 -3.72893 | gap 3, overlap 4187432 GACGGCGGGACGAAA TGCGAGATCTCG-CCGCC-CATCG CGG CGATCTGGCGGACGAGA-CTCGCC GTGATCGGACGCACC TERM 2845 4187477 - 4187432 - G 71 -14.2 -2.83522 | gap 3, overlap 4187431 ACGGCGGGACGAAAT GCGAGATCTCG-CCGCC-CATCG CGG CGATCTGGCGGACGAGA-CTCGC CGTGATCGGACGCAC TERM 2846 4188389 - 4188361 - g 100 -18.9 -3.90112 | overlap 4188362 GGCGCGGGAACGAAA TCGACGATCCGCG AGG CGCGGATCGTCGG GGTCGAACGGACGCA TERM 2847 4188388 - 4188362 - g 100 -22.4 -2.93853 | overlap 4188361 GCGCGGGAACGAAAT CGACGATCCGCG AGG CGCGGATCGTCG GGGTCGAACGGACGC BRADO3998 4188151 - 4188408 + | hypothetical protein TERM 2848 4188483 - 4188430 - T 80 -14.4 -3.19789 | gap 3, opp_overlap 4188446, overlap 4188437 ATAGCGAATAGCGAA TAGCGAATAGCGAATAGCGAAT-AGGT GAG ACCTGATTCGCT-TCC-CTATTCGCTA CTCCCTATTCGCCAT gyrA 4191257 - 4188507 - | DNA gyrase subunit A TERM 2849 4188660 - 4188681 + g 75 -13 -3.35679 | GCGGATGCCGTCGAC GGGGCAGC GGATCA GCTGCCCC TTGTCGGTCACCAGC TERM 2850 4191219 - 4191234 + g 72 -11.8 -3.58565 | opp_overlap 4191207 4191206, overlap 4191211 AATGTCGGAAGGTCC GCCCGG CTCT CCGGGC TTCTCATCTTCTTTA BRADO4000 4192464 - 4191571 - | OprD regulatory protein TERM 2851 4192184 - 4192221 + g 73 -13.4 -3.30038 | gap 1, overlap 4192174 4192162 4192180 GTGATCCGGATCGTT CCGGCCGGCTTGTCGCG CAATT CGCT-CAAGCCGGCCAG TTCCGTTTCGATCTC BRADO4001 4192601 - 4193596 + | aldo/keto reductase family oxidoreductase TERM 2852 4193642 - 4193612 - T 91 -11.9 -4.25104 | gap 2, overlap 4193613 CGCGCTTCACCAAAA CGGC--CGGGCGCTC CGT GAGCGCCCGAAGCCA CTCCTCGTCAACGCA TERM 2853 4193641 - 4193613 - T 73 -13.2 -3.14848 | gap 2, overlap 4193612 GCGCTTCACCAAAAC GGC--CGGGCGCTC CGT GAGCGCCCGAAGCC ACTCCTCGTCAACGC ssb 4194221 - 4193724 - | single-strand DNA-binding protein BRADO4003 4194694 - 4195446 + | putative outer-membrane protein; putative secreted protein TERM 2854 4195493 - 4195475 - f 77 -13.1 -3.6106 | opp_overlap 4195475 GCGAATATGTCGAAA GGCCGGC CTCGC GCCGGCC TTTTTTTGCGTGAGG TERM 2855 4195475 - 4195493 + F 100 -13.1 -5.47218 | opp_overlap 4195475 GCGAATATGTCGAAA GGCCGGC CTCGC GCCGGCC TTTTTTTGCGTGAGG BRADO4004 4195641 - 4196396 + | putative outer-membrane protein; putative secreted protein TERM 2856 4197244 - 4197209 - g 73 -6 -4.30719 | gap 1, opp_overlap 4197235, overlap 4197211 4197213 GTCGCGCACAACAAA TAC-ACCGGCACCGCGA ATG CCGCCGCGCCGGTCGCC GTCGGCACCCTGCTG TERM 2857 4197241 - 4197211 - g 73 -11 -3.75817 | opp_overlap 4197235, overlap 4197209 4197213 CGCGCACAACAAATA CACCGGCACCGCGA ATG CCGCCGCGCCGGTC GCCGTCGGCACCCTG TERM 2858 4197239 - 4197213 - g 75 -13.6 -3.45784 | opp_overlap 4197235, overlap 4197211 4197209 CGCACAACAAATACA CCGGCACCGCGA ATG CCGCCGCGCCGG TCGCCGTCGGCACCC BRADO4005 4196711 - 4197496 + | putative outer-membrane protein; putative secreted protein TERM 2859 4197527 - 4197545 + F 100 -13.1 -4.8048 | opp_overlap 4197527 CCGCAGTTGCGACAA GGCCGGC ATCGC GCCGGCC TTTTTCGTGTCCAGA TERM 2860 4197545 - 4197527 - f 77 -13.8 -3.30124 | opp_overlap 4197527 CCGCAGTTGCGACAA GGCCGGCA TCG CGCCGGCC TTTTTCGTGTCCAGA BRADO4006 4197711 - 4198439 + | putative outer-membrane protein; putative secreted protein TERM 2861 4198470 - 4198487 + F 100 -14.1 -5.16841 | ACCGAAAGTTCCAAG GGCCGGC GCAA GCCGGCC TTTTTGTTGCTCTGG TERM 2862 4198594 - 4198580 - f 86 -8.5 -4.56775 | opp_overlap 4198570 4198570 4198578 4198588 ACTTGCCCGTAAAAA CGCGG TTTCG CCGCG GGTGTGTCTTCAGGG BRADO4007 4198730 - 4199383 + | putative outer-membrane protein, putative secreted protein TERM 2863 4199411 - 4199434 + T 100 -16 -5.26119 | opp_overlap 4199408 CGGGCCAACGCACAG GCCTCCGCTC GCAA GGGCGGAGGC TTTTCTTTTTGACCG BRADO4008 4200689 - 4199499 - | hypothetical protein BRADO4009 4200947 - 4200708 - | hypothetical protein uvrA 4201323 - 4204316 + | excinuclease ABC subunit A BRADO4011 4204580 - 4205227 + | putative phosphoglycolate phosphatase; putative haloacid dehalogenase-like hydrolase BRADO4012 4206279 - 4205314 - | putative signal peptide TERM 2864 4206234 - 4206224 - G 71 -3.2 -4.67608 | GAGCCGAACAGAAAA GCTC CGA GAAC GCCAAGGAGGAGAAA BRADO4013 4206929 - 4206360 - | putative signal peptide TERM 2865 4207034 - 4207017 - R 100 -6.2 -5.4505 | overlap 4207020 TGTTGCAACAAAAAA GACGGC GTCGTG GCCGCC TCACTCCGCGCCGCA BRADO4014 4207721 - 4207035 - | transporter TERM 2866 4208465 - 4208498 + r 84 -8.1 -4.43714 | gap 1, overlap 4208466 GATGGGCCGCGGCGT ACTG-GATCGCCCGGT CAA GCCGGGCGATGACAGC TTTGTTGTGGTTTCT TERM 2867 4208466 - 4208497 + r 70 -11.6 -3.24602 | gap 1, overlap 4208465 ATGGGCCGCGGCGTA CTG-GATCGCCCGGT CAA GCCGGGCGATGACAG CTTTGTTGTGGTTTC BRADO4015 4209328 - 4208558 - | putative ATP-binding protein BRADO4016 4210261 - 4209404 - | hypothetical protein BRADO4017 4211863 - 4210268 - | acyl-CoA synthetase TERM 2868 4211584 - 4211531 - G 85 -13.1 -4.05747 | gap 1, overlap 4211515 GACATGGCAGAGAAA CGCCTTGGCGCCAGAGGCGGTCGC GAGATAG GCGACCTCGTCCGGCATC-AGGCG AAAATTGGTGGGTAC TERM 2869 4211784 - 4211804 + g 85 -16.1 -3.35996 | opp_overlap 4211778 4211777 CACACGAACCCGATG CGGTCGCCG AGG CGGCGGCCG TTCTGCGTCACGATG BRADO4018 4212354 - 4212878 + | putative signal peptide TERM 2870 4213015 - 4213041 + G 82 -17.2 -3.05816 | TCACCCACACCGAGA CGCCGCGTCCGC TGC GCGGGCGCGGCA TTGCCTCCGAACTGG BRADO4019 4212891 - 4213169 + | hypothetical protein BRADO4020 4213286 - 4213450 + | hypothetical protein TERM 2871 4213504 - 4213535 + T 81 -10.1 -4.20918 | opp_overlap 4213510, overlap 4213510 CACATCATCAGATAC GACAAAGGCCCGC ACGATG GCGGGCCTTTCGC TTTCTTGGAGTTGAG TERM 2872 4213510 - 4213529 + T 81 -12.1 -3.93262 | opp_overlap 4213510, overlap 4213504 ATCAGATACGACAAA GGCCCGC ACGATG GCGGGCC TTTCGCTTTCTTGGA TERM 2873 4213529 - 4213510 - T 83 -12.1 -4.04719 | opp_overlap 4213510 4213504 ATCAGATACGACAAA GGCCCGC ACGATG GCGGGCC TTTCGCTTTCTTGGA BRADO4021 4213976 - 4213560 - | hypothetical protein BRADO4022 4214357 - 4215286 + | hypothetical protein TERM 2874 4215311 - 4215334 + F 93 -21 -3.06696 | CAAGAACGTGCTTTT GCCGCCGGCC TTCG GGCCGGCGGC TGTGTTGCGCAACGC TERM 2875 4216105 - 4216086 - g 75 -13.6 -3.44848 | overlap 4216084 GTCCTGGATCAAATA TGCCGTCG ATTT CGACGGCA ACGGCAAGCGCGATC BRADO4023 4215490 - 4216305 + | putative transglycolase TERM 2876 4216346 - 4216320 - T 82 -14.4 -3.28712 | opp_overlap 4216319 GGCTGGGCGGGACAA CGGCCGACCG CGCAATT CGGCCGGCCG CTCATTCACAGATGC BRADO4024 4216568 - 4216377 - | hypothetical protein TERM 2877 4216502 - 4216522 + g 77 -11.1 -3.85184 | overlap 4216515 AGCGCGCATCGCCGT CGGCCATCG CCT CGATCGCCG TTTCGGTCTTTTCCA BRADO4025 4216612 - 4216731 + | hypothetical protein TERM 2878 4216800 - 4216787 - f 88 -3.9 -5.32882 | GAGCAGGACAAAAAA TGAAT TATT ATTCA TGCACCCTCACTCAT BRADO4026 4216814 - 4217104 + | hypothetical protein BRADO4027 4217150 - 4217281 + | hypothetical protein TERM 2879 4217304 - 4217336 + F 86 -12.7 -4.07885 | gap 1 CCTTCCGATATCGAC CGGACATCGCCCGC CTCGTC GCGGGCGTTG-CCG TTTTCGGACCCCCTC BRADO4028 4217475 - 4218872 + | tRNA (uracil-5-)-methyltransferase Gid TERM 2880 4219642 - 4219620 - g 73 -4 -4.60487 | overlap 4219621 4219622 GATGATCCGCAAAAA TCCCGACGTC CGC GACGCCGCCA TCGTCGCCTTCGCCG BRADO4029 4218880 - 4219980 + | serine/threonine protein kinase BRADO4030 4220014 - 4220940 + | TauD/TfdA family dioxygenase BRADO4031 4221182 - 4221874 + | putative dioxygenase; putative taurine dioxygenase BRADO4032 4222744 - 4221890 - | putative phytoene synthase (terpenoid synthase) BRADO4033 4223124 - 4222741 - | hypothetical protein TERM 2881 4223171 - 4223187 + r 84 -2.1 -5.26119 | overlap 4223172 ATCCAAAGGCCAGCT TCCTGCG AAT CACGGGG TTTTCTTTTTCGCCG secF 4224205 - 4223180 - | preprotein translocase subunit SecF secD 4225815 - 4224214 - | preprotein translocase subunit SecD TERM 2882 4225890 - 4225870 - R 71 -9.6 -3.72009 | overlap 4225862 4225859 AGAACATCAGGCAAA GCCCGGCG TCGCG CGCCGGCC AGGCCGCGATCAGCT TERM 2883 4225892 - 4225912 + r 79 -14 -3.47227 | GTCGCGCGCCGGCCA GGCCGCGA TCAGC TCGCGGCC TTCTCGTCCTTCGCA yajC 4226268 - 4225900 - | preprotein translocase (YajC) BRADO4037 4226540 - 4226262 - | hypothetical protein BRADO4038 4226557 - 4227477 + | putative ATPase family protein TERM 2884 4227583 - 4227552 - T 77 -4.2 -4.82901 | opp_overlap 4227559, overlap 4227553 4227554 GCCTCTGCACAAAAA GCGTCATGCCCCGC GCAG GCGGGGCATCCAGT ATGCCGAGGCTTTCG BRADO4039 4229148 - 4227697 - | M23/M37 familypeptidase pcm 4229903 - 4229256 - | protein-L-isoaspartate O-methyltransferase (protein-beta-aspartate methyltransferase) (PIMT) (protein L-isoaspartyl methyltransferase) (L-isoaspartyl protein carboxyl methyltransferase) BRADO4041 4230190 - 4230573 + | putative response regulator receiver (CheY-like protein) surE 4231353 - 4230586 - | stationary phase survival protein SurE BRADO4043 4231808 - 4231440 - | hypothetical protein serS 4233238 - 4231910 - | seryl-tRNA synthetase BRADO4045 4234184 - 4233369 - | putative Sec-independent protein translocase protein TatC BRADO4046 4234717 - 4234181 - | putative sec-independent protein secretion pathway component TatB tatA 4235055 - 4234822 - | twin argininte translocase protein A TERM 2885 4235290 - 4235268 - R 74 -6.2 -4.40561 | overlap 4235288 CGCCCGCAAAAACAA GCACTTCGGC TCC GCCAAATCGC GGCCGGAGCTACGTA TERM 2886 4235348 - 4235310 - R 81 -13.1 -3.68569 | GGAGCTACGTAATAA CGCGAGTGTTAACGGCC GCGCG GGCCGTTACCCCTCCCG GTGCTCGGAGCCATC BRADO4048 4236506 - 4235337 - | hypothetical protein BRADO4049 4237338 - 4236499 - | hypothetical protein TERM 2887 4237189 - 4237242 + g 73 -13.7 -3.15544 | overlap 4237161 CAGGATGGAGATCTT GGCAAGGTCGACCTTCTGCTGCCGC GCCA GCGCGAGCAGCAGGTCGAGCGGGCC TTCATAGCCCTCGAC BRADO4050 4238363 - 4237335 - | putative sugar hydrolase/Beta-N-acetylhexosaminidase TERM 2888 4238369 - 4238350 - G 84 -13.6 -3.90291 | opp_overlap 4238367 ATGCCGGTAATGAAA GCCCGCAT GGTC ATGCGGGC CGCATAGACCCCGTC BRADO4051 4239962 - 4238406 - | hypothetical protein TERM 2889 4238976 - 4238991 + g 72 -11.8 -3.55487 | GCTCGGGGCAGCGGC CGGCGG AGTC CCGCCG TTCTGGTTCATCTGC argS 4241854 - 4240058 - | arginyl-tRNA synthetase BRADO4053 4243029 - 4241863 - | putative dGTP triphosphohydrolase BRADO4054 4243599 - 4243078 - | hypothetical protein BRADO4055 4243169 - 4243510 + | hypothetical protein BRADO4056 4246044 - 4243729 - | sensor histidine kinase TERM 2890 4246323 - 4246365 + r 93 -19.2 -3.29461 | overlap 4246306 4246305 4246324 CGTCCGTGACCGACT CCGTCATGAGCGGGCTTGTC CGG GACAAGCCCGGCCATGACGA TTGTGGAAACGGTTG TERM 2891 4246324 - 4246364 + r 100 -22.7 -2.57463 | overlap 4246306 4246305 4246323 GTCCGTGACCGACTC CGTCATGAGCGGGCTTGTC CGG GACAAGCCCGGCCATGACG ATTGTGGAAACGGTT BRADO4057 4247203 - 4246463 - | putative phosphoesterase TERM 2892 4247368 - 4247426 + r 100 -21.7 -2.82742 | gap 1 AGCACGTTCGTGGTG AGACGGTGGGCACGGTGCTC-GCGACGC TGTC GCGTCGCTGCGCGCCTTGCCCACCCTCC TGGTTATCCGCCGAT BRADO4058 4248329 - 4247430 - | LysR family transcriptional regulator TERM 2893 4248330 - 4248349 + H 78 -2.9 -4.9645 | gap 1, overlap 4248330 4248331 4248333 4248343 GTCGATCCGGTCCAT C-CATTCC TCCCC GGAATGAG TTTTATTCTTGTCAT TERM 2894 4249102 - 4249086 - g 70 -6.5 -4.18018 | opp_overlap 4249092, overlap 4249088 GCTGCTGATGGAAAA CATCCCC GGC GGGGACA TGGCCGATTTGGTGT BRADO4059 4248427 - 4249674 + | putative monooxygenase BRADO4060 4249688 - 4250215 + | hypothetical protein TERM 2895 4250710 - 4250678 - T 75 -12 -3.53811 | gap 1, overlap 4250682 TGGACGGCCGTCAAA TGG-ATCAGCGCCGC ACGC GCGGCGCTGCCGCCA CGCATCCACAGACGC TERM 2896 4250705 - 4250682 - T 71 -13.8 -2.64155 | overlap 4250678 CGGCCGTCAAATGGA TCAGCGCCGC ACGC GCGGCGCTGC CGCCACGCATCCACA BRADO4061 4251920 - 4250742 - | putative oxidoreductase xthA2 4251966 - 4252757 + | exodeoxyribonuclease III BRADO4063 4252784 - 4253641 + | putative Beta-lactamase BRADO4064 4254456 - 4253596 - | putative urease accessory protein ureD ureG 4255061 - 4254453 - | urease accessory protein UreG TERM 2897 4254558 - 4254615 + g 80 -14.1 -3.71848 | gap 1, opp_overlap 4254534 4254536, overlap 4254605 GCCGCCGCGCACGTC GGT-GGCCTCGCGCTGCATGCGGGCG AGATCGA CGCCGACGTGAGGCGCGAGGTCGACC TTGTTGATCACCAGC ureC 4256800 - 4255094 - | urease subunit alpha TERM 2898 4256301 - 4256262 - G 75 -11.4 -3.74872 | gap 1, overlap 4256263 ATCGACTTGAGGAAA TGGCCGAAGTTCGGCCCCG ATC CGGAGCCGA-CGTCGAACA CCGGCCCCGAACCGT ureAB 4257502 - 4256804 - | bifunctional urease subunit gamma/beta TERM 2899 4257181 - 4257130 - G 70 -12.9 -3.02144 | gap 1, opp_overlap 4257133 4257141 GCAGTTCGGTGAACA TCGCGATGTCGTCGCCGCCGGCGA TGATC TCGCCGGGGACGACGTCGTCG-GT TGCAGCGCCTTCCGC TERM 2900 4257133 - 4257176 + g 71 -14.6 -2.52543 | gap 1, opp_overlap 4257130, overlap 4257141 GTTCGGTGAACATCG CGATGTCGTCGCCGCCGGCGA TGA TC-TCGCCGGGGACGACGTCG TCGGTTGCAGCGCCT ureF 4258191 - 4257514 - | urease accessory protein UreF ureE 4258633 - 4258184 - | urease accessory protein UreE BRADO4070 4259205 - 4258903 - | hypothetical protein TERM 2901 4258974 - 4259026 + g 71 -12.6 -3.28712 | opp_overlap 4258984, overlap 4258975 4258995 GGATCGGCTTGGCGA TGCCGAAGAAGG-CCGCCACCGCGGC GGA GCCGTTGTGGCGGTCCATCG-CGGCC TTGTCGGCGAAGCGC TERM 2902 4258975 - 4259025 + g 77 -16.1 -2.57132 | opp_overlap 4258984, overlap 4258974 4258995 GATCGGCTTGGCGAT GCCGAAGAAGG-CCGCCACCGCGGC GGA GCCGTTGTGGCGGTCCATCG-CGGC CTTGTCGGCGAAGCG TERM 2903 4259016 - 4258984 - G 83 -14.7 -3.63515 | opp_overlap 4258975 4258974 4258995 GGCGATGCCGAAGAA GGCCGCCACCGCGGC GGA GCCGTTGTGGCGGTC CATCGCGGCCTTGTC TERM 2904 4259125 - 4259161 + g 77 -16.6 -2.62933 | gap 1 GTTGGCCGCGACATG GGCCGCGACG-GCGACG AGAG CGTCGCGCATCGTGGCC TCGTGTCCCGCCTTG TERM 2905 4259259 - 4259211 - R 71 -11.5 -3.44051 | TGGTGATCATCAGAA GGTCTTCCAGTCGCCGTCGGCCT CGA ACGCCGCCGCCGCCTGGTAGATC GTGGCCTCGGCGTAG BRADO4071 4260719 - 4259205 - | amidase BRADO4072 4261508 - 4260807 - | putative branched-chain amino acid ABC transporter ATP-binding protein BRADO4073 4262233 - 4261505 - | putative branched-chain amino acid ABC transporter ATP-binding protein BRADO4074 4263287 - 4262235 - | branched chain amino acid ABC transporter permease BRADO4075 4264153 - 4263287 - | branched chain amino acid ABC transporter permease TERM 2906 4264213 - 4264184 - R 95 -20.7 -3.35813 | opp_overlap 4264174 4264175, overlap 4264185 GGGCAGTCCAATGAA TCCGGGTCCCGCC GGAT GGCGGGACCCGGC AGGCGTCAGAGATTG TERM 2907 4264212 - 4264185 - R 100 -24.2 -2.61274 | opp_overlap 4264174 4264175, overlap 4264184 GGCAGTCCAATGAAT CCGGGTCCCGCC GGAT GGCGGGACCCGG CAGGCGTCAGAGATT BRADO4076 4265457 - 4264219 - | branched chain amino-acid ABC transporter substrate-binding protein BRADO4077 4266471 - 4265554 - | putative ABC-type branched-chain amino acid transporter (substrate binding protein) BRADO4078 4267279 - 4266806 - | GNAT family acetyltransferase TERM 2908 4267297 - 4267326 + r 73 -12.9 -3.16742 | gap 1, opp_overlap 4267276, overlap 4267279 CAATCCCTCCGTCGC GCGGAG-GGAACGC GAT GCATTCCGCTCCGC TTACTCGCGCTTGCC BRADO4079 4268043 - 4267327 - | TPR repeat-containing exopolysaccharide regulatory protein exoR ilvD 4269871 - 4268147 - | dihydroxy-acid dehydratase BRADO4081 4271078 - 4270107 - | hypothetical protein BRADO4082 4272392 - 4271151 - | threonine synthase TERM 2909 4272502 - 4272450 - R 81 -15.8 -3.09635 | gap 2, opp_overlap 4272453 4272458 4272462, overlap 4272454 4272458 4272462 ATTGCGAGGAGCGAA GCG-A-CGAAGCAATCCAGAGTCTCA CCC TGGGCCCCTGGATTGCTTCGCTTCGC TCGCAATGACGGCGG TERM 2910 4272453 - 4272497 + r 84 -16.5 -3.06183 | opp_overlap 4272450 4272454 4272458 4272462, overlap 4272458 4272462 GCGAGGAGCGAAGCG ACGAAGCAATCCAGAGTCTCA CCC TGGGCCCCTGGATTGCTTCGC TTCGCTCGCAATGAC TERM 2911 4272496 - 4272454 - R 90 -20 -2.55544 | opp_overlap 4272453 4272458 4272462, overlap 4272450 4272458 4272462 CGAGGAGCGAAGCGA CGAAGCAATCCAGAGTCTCA CCC TGGGCCCCTGGATTGCTTCG CTTCGCTCGCAATGA TERM 2912 4272458 - 4272492 + r 76 -13.6 -3.19192 | opp_overlap 4272454 4272450 4272458 4272462, overlap 4272453 4272462 GAGCGAAGCGACGAA GCAATCCAGAGTCTCA CCC TGGGCCCCTGGATTGC TTCGCTTCGCTCGCA TERM 2913 4272492 - 4272458 - R 76 -13.6 -3.22388 | opp_overlap 4272458 4272453 4272462, overlap 4272454 4272450 4272462 GAGCGAAGCGACGAA GCAATCCAGAGTCTCA CCC TGGGCCCCTGGATTGC TTCGCTTCGCTCGCA lpD 4273944 - 4272523 - | dihydrolipoamide dehydrogenase TERM 2914 4274003 - 4273991 - R 70 -10.5 -3.53811 | opp_overlap 4273997 CGTAGGGTGGGCAAA GGCGC GGA GCGCC GTGCCCACCGTCTCA TERM 2915 4273997 - 4274052 + r 73 -11.1 -3.53811 | gap 2, opp_overlap 4273991 GTGGGCAAAGGCGCG GAGCGCCGTGCCCACCGTCTCACGAGC TTGC GAT-GTG-GTCGGTGGGCACGCTGCGC TTTGCCCACCCTACA pdhC 4275463 - 4274105 - | branched-chain alpha-keto acid dehydrogenase subunit E2 BRADO4085 4275771 - 4275466 - | hypothetical protein pdhB 4277180 - 4275783 - | pyruvate dehydrogenase subunit beta TERM 2916 4276898 - 4276933 + g 74 -12.4 -3.57144 | gap 1, overlap 4276929 CGGCCTTCATCTCGG CGGCGGGCG-CCGAGGC CTT GCCGAGGTCGGCCGCCG TTTCGCCATCCGCGA pdhA 4278236 - 4277214 - | pyruvate dehydrogenase E1 component, alpha subunit TERM 2917 4278126 - 4278092 - G 81 -11.4 -3.89822 | CACCCATGCCATAAA GCTGACCCGCCTTTTC CTC AAAGCGGCGGATCAGC AGCATGTCGCGCAGC TERM 2918 4278303 - 4278318 + r 72 -7.6 -4.19735 | opp_overlap 4278299 4278296, overlap 4278301 ACGTAAAAGGACCCC GTGAAC CGCG GTTCAC TTTGCTTTTGCCGCA BRADO4088 4278765 - 4278451 - | hypothetical protein BRADO4089 4279621 - 4278830 - | hypothetical protein TERM 2919 4279712 - 4279677 - R 76 -9.6 -4.09511 | opp_overlap 4279671 4279680, overlap 4279666 4279680 AACACGCCTTGAAAA CGATCGGGCAAGGCGC GTCA ACGCCTTGCCCGCTAT ATCCGTTATGCCGCA TERM 2920 4279680 - 4279709 + r 77 -15 -2.96711 | opp_overlap 4279666 4279680 4279677, overlap 4279671 ACGCCTTGAAAACGA TCGGGCAAGGCG CGTCAA CGCCTTGCCCGC TATATCCGTTATGCC TERM 2921 4279709 - 4279680 - R 81 -15.7 -3.08211 | opp_overlap 4279671 4279680, overlap 4279666 4279677 ACGCCTTGAAAACGA TCGGGCAAGGCGC GTCA ACGCCTTGCCCGC TATATCCGTTATGCC BRADO4090 4280318 - 4279761 - | putative FMN reductase, NADPH-dependent BRADO4091 4281637 - 4280468 - | putative Beta-lactamase family protein; putative 6-aminohexanoate-dimer hydrolase TERM 2922 4281529 - 4281471 - G 78 -13.8 -3.57263 | gap 3, overlap 4281472 4281482 AGCTTCAGGCTGAAA TCCGCGAACGAGACCGGGC-TCGCC-GGC AGCG GCCAGGCGCTGCCCGG-CGCGCTCGCGAC GCCGGCCACCGGCAG TERM 2923 4281528 - 4281472 - G 80 -17.3 -2.74144 | gap 3, overlap 4281471 4281482 GCTTCAGGCTGAAAT CCGCGAACGAGACCGGGC-TCGCC-GGC AGCG GCCAGGCGCTGCCCGG-CGCGCTCGCGA CGCCGGCCACCGGCA TERM 2924 4281748 - 4281720 - R 86 -8.8 -4.65895 | gap 1, opp_overlap 4281720, overlap 4281724 TCGCGTATGCAAAAA CGAACAGGCCGCC CGGA GGCGGCCTGG-CA CAATTTCTCCTGCAT TERM 2925 4281745 - 4281724 - R 100 -17.3 -3.83042 | opp_overlap 4281720, overlap 4281720 GTATGCAAAAACGAA CAGGCCGCC CGGA GGCGGCCTG GCACAATTTCTCCTG BRADO4092 4282950 - 4281952 - | putative metallo-beta-lactamase family protein TERM 2926 4282862 - 4282822 - G 71 -12.4 -3.31144 | gap 1, overlap 4282823 CTTGTAGCGGTAGAA GCCGGGCGCCTG-AGCGCC GGCC GGCGCCACGGCCGCCCGGG CCTGGCCGCCGGTCA TERM 2927 4282861 - 4282823 - G 74 -15.9 -2.58544 | gap 1, overlap 4282822 TTGTAGCGGTAGAAG CCGGGCGCCTG-AGCGCC GGCC GGCGCCACGGCCGCCCGG GCCTGGCCGCCGGTC TERM 2928 4282986 - 4283008 + r 72 -13.4 -2.68823 | opp_overlap 4282976 4283000, overlap 4282985 TAACAGCGGCCGACA CCGCCCCC ACGAAAC GGGGGCGG ATTGTCTCCAGCCGC BRADO4093 4284212 - 4283070 - | alcohol dehydrogenase-like protein eno 4285530 - 4284247 - | enolase (2-phosphoglycerate dehydratase) (2-phospho-D-glycerate hydro-lyase) BRADO4095 4285712 - 4286188 + | 7-cyano-7-deazaguanine reductase BRADO4096 4286175 - 4286522 + | hypothetical protein BRADO4097 4287484 - 4286627 - | transposase TERM 2929 4287233 - 4287256 + g 70 -6.6 -4.20918 | opp_overlap 4287229 4287234, overlap 4287234 CTGCGCGAGAAGATT ATCCTGCCGC ATGA GCCGCAGGAC TTTCTTGGCATTGAC BRADO4098 4287792 - 4287481 - | putative transposase (fragment) BRADO4099 4288647 - 4289093 + | hypothetical protein TERM 2930 4289766 - 4289810 + T 84 -16.6 -3.06183 | gap 1, opp_overlap 4289738 4289734 4289776, overlap 4289772 4289776 GCCCGAAGGGCGACG GCGGAAGCAATCCAGGGGCTC GGGT GGGACTCTGGATTGCTT-CGC TTCGCTCGCAATGAC TERM 2931 4289772 - 4289805 + T 76 -13.9 -3.19192 | opp_overlap 4289738 4289734 4289776, overlap 4289766 4289776 AGGGCGACGGCGGAA GCAATCCAGGGGCTC GGGT GGGACTCTGGATTGC TTCGCTTCGCTCGCA BRADO4100 4291193 - 4289973 - | major facilitator superfamily permease TERM 2932 4290909 - 4290873 - G 88 -16.5 -3.63782 | GAACAGCAGCGGAAA CGAGGTCGCGAGCGCGC CGA GCACGCTGGCGACGCCG AGCAGCGCCAGGCAC kdsA 4292056 - 4291193 - | 2-dehydro-3-deoxyphosphooctonate aldolase TERM 2933 4292168 - 4292133 - R 71 -13.2 -3.03338 | overlap 4292122 4292136 AGAACCCCGCGAATA TCAGGGTTGCGGGGAC GGTC ATCCCCGCATCCCCGT ACGCCGCCCTATTTC TERM 2934 4292165 - 4292136 - R 78 -15.7 -2.73994 | overlap 4292122 4292133 ACCCCGCGAATATCA GGGTTGCGGGGAC GGTC ATCCCCGCATCCC CGTACGCCGCCCTAT BRADO4102 4292503 - 4292177 - | hypothetical protein TERM 2935 4292614 - 4292656 + r 84 -16.5 -3.06183 | gap 1, opp_overlap 4292619 4292623, overlap 4292619 4292623 CGAGGAGCGTCAGCG ACGAAGCAATCCAGGGCTGC GCAA GCA-CTCTGGATTGCTTCGC TTCGCTCGCAATGAC TERM 2936 4292619 - 4292651 + r 76 -13.6 -3.19192 | gap 1, opp_overlap 4292619 4292623, overlap 4292614 4292623 AGCGTCAGCGACGAA GCAATCCAGGGCTGC GCAA GCA-CTCTGGATTGC TTCGCTTCGCTCGCA pyrG 4294327 - 4292696 - | CTP synthetase TERM 2937 4294510 - 4294555 + r 75 -11.7 -3.66018 | gap 1 TTATTGCGACTGCGG GGCGGACGGCGCGCTCGGCGCC GCA GGCGCCTGCTGC-TCGTCGGCC TTCTTCAGCTGGTCG secG 4294878 - 4294495 - | preprotein translocase subunit SecG TERM 2938 4294936 - 4294897 - H 88 -16.4 -3.28924 | gap 1, opp_overlap 4294925 GACCTTCCGTCACAA GCCCTCGCAGGCCCCGACC GGA GGCCGGGATC-GCGAGAGC TTCGCGGGCTATTCG BRADO4105 4295087 - 4295653 + | transcriptional regulator BRADO4106 4295656 - 4296183 + | GNAT family acetyltransferase tpiA 4296970 - 4296215 - | triosephosphate isomerase (TIM) (Triose-phosphate isomerase) BRADO4108 4297194 - 4299104 + | putative peptidylprolyl isomerase TERM 2939 4299693 - 4299708 + G 72 -5.4 -4.37092 | gap 1, overlap 4299673 CCCGCTGGCGTCAAG CGCCAGA TGG TC-GGCG TTTTCTCCAGGCAGT trpD 4299123 - 4300139 + | anthranilate phosphoribosyltransferase trpC 4300155 - 4300973 + | indole-3-glycerol-phosphate synthase moaC 4300970 - 4301467 + | molybdenum cofactor biosynthesis protein C TERM 2940 4303968 - 4303992 + G 70 -11.3 -3.53224 | ACGAGTTGCGCGCGC TCGGCGTGCGC ATC GCGCTCGACGA TTTCGGCACCGGCTA BRADO4112 4301618 - 4304329 + | signaling protein TERM 2941 4304533 - 4304499 - T 95 -15.7 -4.07885 | gap 1, opp_overlap 4304500 4304527, overlap 4304502 CACGCTGGTCGAAAA CCACGGCGTGACGACC GCAA GGTCGCCCCGCCG-GG TGTGATCACCACGGG TERM 2942 4304500 - 4304533 + T 72 -13.7 -2.78384 | opp_overlap 4304499 4304502, overlap 4304527 ACGCTGGTCGAAAAC CACGGCGTGACGACC GCAA GGTCGCCCCGCCGGG TGTGATCACCACGGG TERM 2943 4304531 - 4304502 - T 88 -17.1 -3.08032 | opp_overlap 4304500 4304527, overlap 4304499 GCTGGTCGAAAACCA CGGCGTGACGACC GCAA GGTCGCCCCGCCG GGTGTGATCACCACG TERM 2944 4304527 - 4304563 + T 70 -11.6 -3.17075 | opp_overlap 4304502 4304499, overlap 4304500 ACCGCAAGGTCGCCC CGCCGGGTGTG-ATCACC ACG GGTGCTGCGC-CCCGGCG TTCAGTTCGGAACCG ctpA 4305899 - 4304565 - | carboxy-terminal-processing protease precursor (C-terminal-processing protease) TERM 2945 4306191 - 4306175 - H 74 -12.3 -3.49168 | overlap 4306173 ATCACAACTCAAAGA GCCGTGT GCG ACACGGC GAATCGGCGGGCACC BRADO4114 4306301 - 4307437 + | putative FMN-dependent alpha-hydroxy acid dehydrogenase family protein; putative glycolate oxidase BRADO4115 4307483 - 4308112 + | putative haloacid dehalogenase-like hydrolase TERM 2946 4308322 - 4308273 - f 74 -14.4 -2.52543 | ATTTTCGCCAACTCA CATCTC-GCGGTATGGGTCCCGGC GTTC GCCGGGACG-ACACCGCGGAGGTG GCAAAGTGTGGGGTC TERM 2947 4308894 - 4308880 - f 84 -8.6 -4.41309 | opp_overlap 4308879 AAAGAAGAACATAAA TTTCGG TAT CCGAAA ATCTCTCCCTGTCTC TERM 2948 4309162 - 4309197 + G 88 -16.1 -3.68265 | overlap 4309188 4309190 GCCGACTACGCCATT GCCGCGCTCGACGGC GAAGAG GTGGTCGGGCGCGGC TTTGCCGTTCCGTTT BRADO4116 4309090 - 4309758 + | hypothetical protein BRADO4117 4309847 - 4310050 + | hypothetical protein TERM 2949 4310082 - 4310107 + F 71 -12.5 -3.03124 | CGTCGCGATCGATCT GGCGTTCTGGC GCGC GCCGGATCGCC TGTTCGACGATCCCG BRADO4118 4310222 - 4311034 + | alpha/beta family hydrolase BRADO4119 4311163 - 4312368 + | putative molybdopterin biosynthesis protein moeA lexA 4312589 - 4313287 + | LexA repressor BRADO4121 4313588 - 4314028 + | hypothetical protein BRADO4122 4316503 - 4314200 - | putative ComEC/Rec2 family protein TERM 2950 4314480 - 4314423 - G 80 -17 -2.78384 | gap 2 GGGCGGTCGACGACA GCGGCCGCGCAG-GATGATGGCG-CGGC GCGC GCCGTCACCACCAGCGCCGCACGGGCGC AATCATCGGCGAGCG TERM 2951 4314709 - 4314676 - G 89 -18.1 -3.40299 | gap 1 GCATCACATGCAGAA GCCCGTCGCGGCCGCG CAC CGCGACCGCG-CGGCC ATCGCCGGAGACGAG TERM 2952 4315471 - 4315439 - G 77 -12.7 -3.70033 | gap 1, opp_overlap 4315436 4315440 4315441, overlap 4315440 CAGCAACAGATAGAA CGCGGCGGCCGCCA AAGCCG CGGCGGCCGCC-CA TTTCTTGATCGGATG TERM 2953 4315440 - 4315471 + g 85 -10 -4.25056 | opp_overlap 4315439 4315440, overlap 4315436 4315441 AGCAACAGATAGAAC GCGGCGGCCGCC AAAGCCGC GGCGGCCGCCCA TTTCTTGATCGGATG TERM 2954 4315468 - 4315440 - G 73 -14.5 -2.81297 | opp_overlap 4315440 4315436 4315441, overlap 4315439 AGCAACAGATAGAAC GCGGCGGCCGC CAAAGCC GCGGCGGCCGC CCATTTCTTGATCGG TERM 2955 4315441 - 4315470 + g 72 -13.5 -3.14552 | opp_overlap 4315440 4315439, overlap 4315440 4315436 GCAACAGATAGAACG CGGCGGCCGCC AAAGCCGC GGCGGCCGCCC ATTTCTTGATCGGAT TERM 2956 4316224 - 4316177 - G 77 -10.4 -3.90744 | gap 1, overlap 4316174 4316199 CGCCGCCGGAAACAA CGGGTGCCGGCGCATGAGCACAG CGG CCGCGCCCA-GCGCGAGCGCCAG GGCCACGCTCACCCA BRADO4123 4316635 - 4316847 + | hypothetical protein glnS 4318555 - 4316864 - | glutaminyl-tRNA synthetase TERM 2957 4317516 - 4317492 - G 93 -19.3 -2.53759 | opp_overlap 4317489, overlap 4317479 4317481 AAGACCTTCAAGGGA CGCAGCACCGC CAT GCGGCGCTGCG CCGTTCGGTTGAGCT TERM 2958 4319582 - 4319599 + G 71 -9.1 -3.84451 | gap 1 TGACCTGCCGGCGAT CG-GCCGC TCG GCGGCGCG TTTCGATTTCGCCAA gltX 4318689 - 4320125 + | glutamyl-tRNA synthetase gltA 4320458 - 4321762 + | type II citrate synthase TERM 2959 4321782 - 4321821 + T 100 -20.2 -3.60805 | opp_overlap 4321789, overlap 4321789 GGCGAAGCGATCAAT GATGAAAGGCCCGTTCAG CACG CTGAACGGGCCTTTTTTC TTTGCGCTGGCATGT TERM 2960 4321814 - 4321789 - T 100 -19.1 -3.85704 | opp_overlap 4321782 4321789 CGATCAATGATGAAA GGCCCGTTCAG CACG CTGAACGGGCC TTTTTTCTTTGCGCT TERM 2961 4321789 - 4321814 + T 100 -19.1 -5.64421 | opp_overlap 4321789, overlap 4321782 CGATCAATGATGAAA GGCCCGTTCAG CACG CTGAACGGGCC TTTTTTCTTTGCGCT lpxB 4323316 - 4322120 - | Lipid-A-disaccharide synthase BRADO4128 4324170 - 4323313 - | hypothetical protein lpxA 4324988 - 4324176 - | UDP-N-acetylglucosamine acyltransferase fabZ 4325476 - 4325018 - | (3R)-hydroxymyristol acyl carrier protein dehydratase lpxD 4326543 - 4325476 - | UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase TERM 2962 4326545 - 4326529 - G 77 -5.7 -4.64766 | TGGAGATTGGAAAAA GGTCGGC TGG GCCATCC CGTCACACTCTCAAA TERM 2963 4326603 - 4326562 - R 72 -7.9 -4.13014 | opp_overlap 4326564 4326567, overlap 4326563 GTCACACTCTCAAAA CGTCAGAGCCCGGCTCCAG TCTC CCGGAACCGAGCTCTCATC TCTTACACCGGCTGG BRADO4132 4329217 - 4326656 - | hypothetical protein BRADO4133 4330541 - 4329390 - | putative Zinc metalloprotease TERM 2964 4329952 - 4329939 - G 79 -4.5 -4.72272 | CCGCTTGATCAAAAA GCTCA GCTC CGAGC CGGCATTCACCGACA dxr 4331804 - 4330581 - | 1-deoxy-D-xylulose 5-phosphate reductoisomerase TERM 2965 4330611 - 4330624 + g 73 -3.7 -4.58663 | opp_overlap 4330611 4330613 GGCGATTTGAGGCAA GAGCC CCGC GGCCC TTTTTCGGGCATCAT cdsA 4332702 - 4331845 - | phosphatidate cytidylyltransferase (CDP-diacylglycerol synthase) ispU 4333457 - 4332699 - | undecaprenyl pyrophosphate synthetase frr 4334033 - 4333470 - | ribosome recycling factor (ribosome-releasing factor) (RRF) pyrH 4334913 - 4334197 - | uridylate kinase TERM 2966 4334939 - 4334975 + r 80 -16.6 -2.6574 | overlap 4334932 4334972 4334973 GTCCCAATCTCGCGC GTTGAGATCCGGCGCG ACGTC CGCGCCGGATCGTGAC TGATGTCAGTCGTTA tsf 4335911 - 4334988 - | elongation factor Ts TERM 2967 4335764 - 4335780 + g 70 -3.6 -4.56597 | overlap 4335765 GGCCGGCCTTCTTGG CGGCCT TCGAC AGGCCC TTTTTGCGCAGCCAA TERM 2968 4335997 - 4336023 + r 72 -12.2 -3.32727 | overlap 4335998 CCCTATCTCAGTCGC GATGGCCGGCGT GCG ACGCCGGCCAGA TTCGTGTCGTCTTAG TERM 2969 4335998 - 4336022 + r 77 -15.7 -2.59154 | overlap 4335997 CCTATCTCAGTCGCG ATGGCCGGCGT GCG ACGCCGGCCAG ATTCGTGTCGTCTTA rpsB 4337024 - 4336035 - | 30S ribosomal protein S2 TERM 2970 4337085 - 4337069 - R 100 -15.1 -4.7254 | ACGCGTGAGCAAAAA CGGGCCG TTA CGGCCCG GCTTGCCACCGGACG BRADO4141 4337563 - 4337180 - | hypothetical protein BRADO4142 4338760 - 4337801 - | hypothetical protein BRADO4143 4340097 - 4338757 - | serine protease BRADO4144 4342527 - 4340227 - | hypothetical protein TERM 2971 4341042 - 4341083 + g 76 -15.1 -3.14051 | gap 1, overlap 4341053 4341076 4341078 4341079 CGGCGGCAGGTCCAG CCGTGACCGGTCCGGCCGGC GGC GCCGGACGG-TTGATCACGG TGTTGATGACCGTGG TERM 2972 4341053 - 4341073 + g 73 -13.9 -3.16668 | overlap 4341042 CCAGCCGTGACCGGT CCGGCCGGC GGC GCCGGACGG TTGATCACGGTGTTG dnaE 4346231 - 4342707 - | DNA polymerase III subunit alpha TERM 2973 4342934 - 4342959 + g 71 -12.6 -3.25823 | CCCCGTCGCCCTGCA GCCGCTTGAC GATGGA GTCGAGCGGC TTGGTGTCGCGCAGG TERM 2974 4343516 - 4343541 + g 79 -11.7 -3.78934 | CGGCGACGATCGCGT CGGCGCCGGCG AACA CGCGGGCGCGG TTCTTGTCCAGGCAG TERM 2975 4344433 - 4344377 - G 77 -15.8 -3.06261 | gap 1 TTTCAACCTGGAACA CGCCGACC-ACATCGCCGCGCGCCAGC ATCT GGTAGCTCGCGGCGTCGTCGATCGGCA AGGTCGCGAGATCGA TERM 2976 4346341 - 4346387 + r 70 -7.2 -4.07568 | gap 2, opp_overlap 4346342, overlap 4346342 4346376 4346377 TCGCTCCGCCATGAT ACCGGATCAGCCGCCCGCGAGT CCGGC GCCC-CGGTCGGCTG-TCCGGC TTTTCCCCAGCCGGG BRADO4146 4346580 - 4346419 - | hypothetical protein TERM 2977 4346668 - 4346647 - R 100 -15.1 -4.7497 | opp_overlap 4346644 TCGATCCACGAAAAA GCCCCGGCG CGAA CACCGGGGC TGATCGATTCGCCGA BRADO4147 4347440 - 4346727 - | putative outer-membrane protein precursor BRADO4148 4347706 - 4348008 + | hypothetical protein TERM 2978 4348019 - 4348045 + T 93 -13.7 -4.18494 | overlap 4348021 ATTGAGTGGAGTTGA TACCGGACGGC AGGAC GCCGTCCGGTC TTTTCGATGCGCCTC TERM 2979 4348021 - 4348043 + T 93 -16.3 -3.69216 | overlap 4348019 TGAGTGGAGTTGATA CCGGACGGC AGGAC GCCGTCCGG TCTTTTCGATGCGCC BRADO4149 4348915 - 4348136 - | putative outer-membrane protein. BRADO4150 4350139 - 4349369 - | hypothetical protein TERM 2980 4349579 - 4349564 - G 72 -11.8 -3.58037 | GAGCAACTCGGCAAA GGCGGG ATCG CCCGCC CAGAGATCGTAGGTC TERM 2981 4350038 - 4350083 + g 93 -15.4 -4.07568 | GCGCAGCCCCGTGGC GC-GACGCCGCCGGCCGGCCGG GAGA CCGACCG-CTTGCGGCGTCAGC TTTTCACGCCGCGAG BRADO4151 4350328 - 4351344 + | putative alcohol dehydrogenase, zinc-dependent lolD 4352058 - 4351357 - | lipoprotein-releasing system ATP-binding protein lolD TERM 2982 4351428 - 4351457 + g 77 -12.9 -3.51411 | overlap 4351429 4351443 4351446 CGGCCAGCTCCATGT TGTGGGTCGCGAT CAGC ATCGCGACTCGCG TTGCTTTCACGAGCT lolC 4353346 - 4352066 - | LolC/E family lipoprotein releasing system, transmembrane protein proS 4354776 - 4353442 - | prolyl-tRNA synthetase TERM 2983 4353686 - 4353714 + g 75 -11.8 -3.66356 | overlap 4353688 CGATAGAGCTGCTCA CA-GGCGGCATCGG TGT CCGA-GCCGCCCTG TTTCAAATTGAGGAT TERM 2984 4353688 - 4353711 + g 71 -14.6 -2.64412 | gap 1, overlap 4353686 ATAGAGCTGCTCACA GGCGGCATCGG TGT CCGA-GCCGCC CTGTTTCAAATTGAG TERM 2985 4354147 - 4354116 - G 72 -14.4 -3.07013 | opp_overlap 4354118, overlap 4354118 TACGGTCGCAATACA CACCGGACTCGCCG GTTT CGGCGAGCACGATG AACTCATGACTGAGA TERM 2986 4354872 - 4354860 - R 83 -6.9 -4.87665 | TGGGATTGAGAAAAA GCGGC TAA GCCAC CGTATTCCCGATCAT BRADO4155 4356559 - 4354988 - | copper resistance protein TERM 2987 4355661 - 4355636 - G 70 -6 -4.21194 | CGCGATCACGGAAAA CCTGCGCAGC GCCGCT GCCGCACCGG CATCGGCCGTCATCG BRADO4156 4357089 - 4356556 - | hypothetical protein BRADO4157 4359571 - 4357097 - | putative TonB dependent receptor TERM 2988 4359349 - 4359370 + g 95 -15.1 -4.25104 | AGGCCGGTGACGCTG CCGGCTGCG GCGT CGCGGCCGG TTTTGATGCGCGGGC TERM 2989 4359643 - 4359626 - R 74 -10.5 -3.727 | overlap 4359630 CTGATCAGATGCAAA GCGACGC GGCT GCGCCGC TGGCGACGTGTCCGT BRADO4158 4360101 - 4359658 - | hypothetical protein BRADO4159 4360883 - 4360098 - | putative DJ-1/PfpI family protein TERM 2990 4360839 - 4360795 - G 72 -14.3 -3.05384 | GGCTTGCCCAGGGAA CGCGGCGCCTGCT-CGGCCTG CGCGC CCGGCAGCAGCAGGC-CCGCG AGCGAGCCTGCCAGA BRADO4160 4361405 - 4360899 - | putative signal peptide BRADO4161 4361925 - 4361539 - | putative signal peptide TERM 2991 4362322 - 4362348 + r 100 -7.9 -5.52384 | opp_overlap 4362320, overlap 4362324 4362336 GGGTCGACACAATTT CCGAGCAGGGC CCGCT GCCCTGCTCTA TTTTTTTGCTGGGCA TERM 2992 4362324 - 4362346 + r 100 -14.9 -4.40552 | opp_overlap 4362320, overlap 4362322 4362336 GTCGACACAATTTCC GAGCAGGGC CCGCT GCCCTGCTC TATTTTTTTGCTGGG BRADO4162 4363286 - 4362387 - | putative hydrolase TERM 2993 4363661 - 4363647 - g 72 -8.5 -4.07568 | opp_overlap 4363646 4363647, overlap 4363631 GGGCCGCTCCGAAAA GCCGC TCAAG GCGGC GTTCTCCAATGCCGG BRADO4163 4363498 - 4364532 + | sugar ABC transporter substrate-binding protein TERM 2994 4365444 - 4365474 + G 77 -15.5 -3.02461 | gap 1 GTCTACGGCTTCATG GGGTGCG-GCCAGC TCGA GCTGGCGCGCATCC TGTTCGGCAAGCTTG BRADO4164 4364544 - 4366049 + | sugar ABC transporter ATP-binding protein BRADO4165 4366060 - 4367097 + | sugar ABC transporter permease TERM 2995 4367142 - 4367122 - T 81 -13.9 -3.58343 | CGTAGGATGGGCAAA GCAGCCGCC GAA GGCGGCAGC GTGCCCACCGTCCAA mtnK 4368702 - 4367401 - | methylthioribose kinase TERM 2996 4368160 - 4368186 + g 77 -13 -3.54902 | overlap 4368156 GATCTTGCACAGCGC GTGATTGCCGGC AAA GCTGGCGATCGC TTCCTTCTTGGCTGC TERM 2997 4368772 - 4368749 - R 100 -16 -5.21709 | TCCTATAGCAAAAAA GCCGACGCGC GTCC GCGCATCGGC CGGAGAGGATGTTGT BRADO4167 4369177 - 4368902 - | hypothetical protein BRADO4168 4369594 - 4369190 - | putative glyoxalase I family protein; putative methylmalonyl-CoA epimerase BRADO4169 4371312 - 4369642 - | metallo-beta-lactamase family hydrolase BRADO4170 4372122 - 4371313 - | putative biotin--[acetyl-CoA-carboxylase] synthetase (biotin--protein ligase), birA-like protein TERM 2998 4371616 - 4371585 - G 70 -13.6 -3.02263 | AGAGCGCCGTGAACA GGTCCTCGGCGCTG ACCT CGACGCCGAGGTCC CGCAGCGAGACCGCC TERM 2999 4371892 - 4371868 - G 74 -12.1 -3.5594 | AAGGCAGGCCGCAAA TCCGAGCGTCG CGG CGACGGCCGGA ATGACGTCGAGCACT TERM 3000 4372107 - 4372074 - G 75 -15.3 -2.75992 | gap 1, opp_overlap 4372065, overlap 4372071 CCTGATCGAAGACGA CGAGCCCGTAGCCGCC GGC AGCGGC-ACGGGCTCC GAGCGCCAACGTCAT nuoN 4373550 - 4372123 - | NADH dehydrogenase subunit N nuoM 4375088 - 4373580 - | NADH dehydrogenase subunit M nuoL 4377178 - 4375085 - | NADH dehydrogenase subunit L TERM 3001 4376902 - 4376867 - G 72 -13.2 -3.14132 | gap 1, overlap 4376882 TTCGTGGTGCATGAA GCCGACGCTGACCAAGG TCG CCCAGGACAGCG-CGGC CGAGACGAACAGCAG nuoK 4377552 - 4377244 - | NADH dehydrogenase subunit K nuoJ 4378187 - 4377549 - | NADH dehydrogenase subunit J nuoII 4378685 - 4378197 - | NADH dehydrogenase subunit I nuoH 4379763 - 4378693 - | NADH dehydrogenase subunit H nuoG 4381843 - 4379774 - | NADH dehydrogenase subunit G nuoF 4383266 - 4381941 - | NADH dehydrogenase I subunit F BRADO4180 4383501 - 4383286 - | hypothetical protein TERM 3002 4383414 - 4383404 - G 76 -8.2 -4.24384 | overlap 4383405 AGTACGAAAATGAAA GCGG CCG CCGC AACCGTGTGCAGGGC nuoE 4384109 - 4383498 - | NADH dehydrogenase subunit E TERM 3003 4383569 - 4383616 + g 70 -11.2 -3.55563 | gap 1 CGTTCTGCGGACCCG GCGTCGGCAGGTTGC-CGGTCGC GAA GCCGTCGAGCACCTTGCCGAAGC TTTCCGGCGTCAGGT BRADO4182 4385083 - 4384124 - | hypothetical protein nuoD 4386279 - 4385083 - | NADH dehydrogenase subunit D TERM 3004 4386030 - 4385983 - G 90 -19 -3.15861 | opp_overlap 4386027, overlap 4385973 4385970 CAGCACGCGGATCAA CTGGCCGCGGCGCGGCACCTCG ATGC CGAGCAGCCGCTCGGCAGCCAG GCAGAACGCATGCTC nuoC 4386899 - 4386294 - | NADH dehydrogenase subunit C nuoB 4387492 - 4386911 - | NADH dehydrogenase subunit B nuoA 4387854 - 4387489 - | NADH dehydrogenase subunit A TERM 3005 4387552 - 4387531 - G 70 -10.1 -3.65351 | CCATTCGTAGGCAAA CCCGACCGT CAGC ACGGCCAGG AACACCAGCATCGAC BRADO4187 4387983 - 4388267 + | hypothetical protein BRADO4188 4388469 - 4388669 + | putative signal peptide TERM 3006 4388703 - 4388721 + F 100 -17.4 -4.55128 | CTTGCATCAGTTTGA GGCCGCCG GTT CGGCGGCC TTTTGCTTTGCGGGT pepT 4389412 - 4390668 + | peptidase T BRADO4190 4391545 - 4390688 - | putative S-adenosyl-L-methionine (SAM)-dependent methyltransferase BRADO4191 4392185 - 4391631 - | hypothetical protein TERM 3007 4392076 - 4392058 - G 72 -4.5 -4.46212 | overlap 4392070 TTCTCGACCAGAAAA TGCTGCA GATCA TGCGGCA TCCACGGATCGAAGC BRADO4192 4392413 - 4392640 + | hypothetical protein BRADO4194 4393989 - 4393504 - | putative cyclic nucleotide binding protein BRADO4193 4392738 - 4393565 + | hypothetical protein BRADO4195 4394132 - 4394341 + | hypothetical protein TERM 3008 4394347 - 4394327 - T 74 -9 -3.86897 | gap 1, opp_overlap 4394327, overlap 4394341 GTCAGCCTGGAGAAA CGCGCGGCT GAAT AGCCGC-CG TTCATGCGGCTGACA TERM 3009 4394609 - 4394580 - T 86 -17.9 -2.73124 | opp_overlap 4394584, overlap 4394524 4394585 GGTCACCCCGCAAAC GAAAACGGCGCCC TTTC GGGCGCCGCTTCC CTGGATCACTTCAGC TERM 3010 4394584 - 4394605 + T 71 -12.9 -3.08312 | opp_overlap 4394580 4394585 ACCCCGCAAACGAAA ACGGCGCCC TTTC GGGCGCCGC TTCCCTGGATCACTT TERM 3011 4394604 - 4394585 - T 100 -16.4 -4.54727 | opp_overlap 4394584, overlap 4394580 CCCCGCAAACGAAAA CGGCGCCC TTTC GGGCGCCG CTTCCCTGGATCACT lon 4397050 - 4394627 - | ATP-dependent protease La TERM 3012 4397338 - 4397297 - R 76 -10.8 -3.70902 | gap 1, overlap 4397299 GGCGGGATACTGAAA CACTGCGA-CGCCGCGGAC TGAAC GTCCGCAGCGGTCGCTGAA CTGATAAATCGAGTC TERM 3013 4397336 - 4397299 - R 85 -15.6 -3.43773 | gap 1, overlap 4397297 CGGGATACTGAAACA CTGCGA-CGCCGCGGAC TGAAC GTCCGCAGCGGTCGCTG AACTGATAAATCGAG TERM 3014 4397365 - 4397391 + r 87 -17.3 -2.90496 | overlap 4397363 AGTCGTCTGTCGATC GTGCCAGCGCG GATCA CGCGCTGGCGC TGCTTTCCACCGCGC clpX 4398652 - 4397378 - | ATP-dependent protease ATP-binding subunit TERM 3015 4398689 - 4398719 + rH 83 -15.4 -3.14132 | GCTCTTGTCCGCTCG TTCGTTCCGACCCG GCT CGGGCCGGACCGAA TTGATGAAAGAGCAA clpP 4399728 - 4399096 - | ATP-dependent Clp protease proteolytic subunit BRADO4199 4399727 - 4399924 + | hypothetical protein tig 4401381 - 4400026 - | trigger factor TERM 3016 4401476 - 4401529 + H 74 -12.3 -3.53224 | gap 1, overlap 4401470 ACGAGCCTTGCGCCG GTGGGATCGGTGCCGCCGCTCTCCTG TCG CAGGAGCGCGGCTGCGCCG-TGAAAC TTTGGGCAAACGCTA TERM 3017 4401661 - 4401685 + H 82 -14.9 -3.29144 | TGCATCGATAGCCCG GCCGCGATGCC GCG GGCGGCGCGGC TTATACCACGCGTGA TERM 3018 4401852 - 4401874 + G 86 -16.2 -3.53444 | overlap 4401856 GCTGGGAGGGAGTCA GCCGCCGCGC CGT GCTCGGCGGC TTTGCCGCAGCCTGC TERM 3019 4402285 - 4402301 + G 82 -4.3 -4.91109 | GGTATTGCCGGTAAC CTTCGAC CGC GACGAGG TTTTTCTGGTCGAGG BRADO4201 4401815 - 4403122 + | putative multicopper oxidase BRADO4202 4403147 - 4404229 + | putative mandelate racemase/muconate lactonizing family protein TERM 3020 4404310 - 4404271 - T 85 -15.8 -3.53444 | gap 1, opp_overlap 4404265 4404263, overlap 4404272 4404275 CGACGCCGCCGCAAA CTCAGCTGGATCGCCCGGC TTG ACCGGGCGATCCAG-TATG CCGAGGCGTCTTTGA TERM 3021 4404311 - 4404272 - T 72 -13.6 -2.71924 | gap 1, opp_overlap 4404265 4404263, overlap 4404271 4404275 GACGCCGCCGCAAAC TCA-GCTGGATCGCCCGGC TTG ACCGGGCGATCCAGTATGC CGAGGCGTCTTTGAT TERM 3022 4404307 - 4404275 - T 90 -19.9 -2.64155 | opp_overlap 4404265 4404263, overlap 4404271 4404272 GCCGCCGCAAACTCA GCTGGATCGCCCGGC TTG ACCGGGCGATCCAGT ATGCCGAGGCGTCTT BRADO4203 4405907 - 4404408 - | hypothetical protein TERM 3023 4405157 - 4405103 - G 71 -14.9 -2.52464 | gap 2 CGCGCGGCGAAGCCA GCGTCAC-CAGGCCGGCGC-CGGCGCG CAG CGCGGCGCGCGCCGCCATGCGCGAGGC CCCTGTCGCCGCGAC glnB 4406453 - 4406791 + | nitrogen regulatory protein P-II TERM 3024 4407400 - 4407417 + G 86 -6.9 -4.87626 | overlap 4407401 4407414 GGCGATTCCGTGTTC GTCGGCC CCGA GGCCGAG TTTTTCGTGTTCGAC glnA 4407019 - 4408428 + | glutamine synthetase I (glutamate--ammonia ligase I) (GSI) TERM 3025 4408451 - 4408480 + T 83 -14.3 -3.53012 | opp_overlap 4408457, overlap 4408457 AATTGATCGGCGGAT CACGAAGGCGCCC CTCG GGGCGCCTTTTTG TTTGCCGGGGCGAAC TERM 3026 4408474 - 4408457 - T 76 -14.1 -3.21099 | opp_overlap 4408457 4408451 TCGGCGGATCACGAA GGCGCCC CTCG GGGCGCC TTTTTGTTTGCCGGG TERM 3027 4408457 - 4408474 + T 100 -14.1 -5.27335 | opp_overlap 4408457, overlap 4408451 TCGGCGGATCACGAA GGCGCCC CTCG GGGCGCC TTTTTGTTTGCCGGG BRADO4206 4408846 - 4408568 - | hypothetical protein BRADO4207 4409170 - 4408883 - | hypothetical protein BRADO4208 4409817 - 4409206 - | hypothetical protein BRADO4209 4410666 - 4409896 - | putative gamma-glutamyl hydrolase family protein BRADO4210 4410856 - 4412034 + | putative transport protein/permease BRADO4211 4413215 - 4412046 - | putative amidohydrolase family protein; putative hippurate hydrolase (benzoylglycine amidohydrolase) BRADO4212 4413710 - 4414990 + | major facilitator superfamily citrate transporter permease TERM 3028 4415040 - 4414991 - T 84 -13.7 -3.77808 | gap 4, opp_overlap 4414999, overlap 4414986 4414992 CGCAGGAGAACATAA GCGCGTCAGCGCGTGCGCG-GCTGC GATC GCAGCGCGCGCA-GCTC-G-CGCGC GAGATTGGCTCGCGC TERM 3029 4415041 - 4414992 - T 74 -13.7 -2.86203 | opp_overlap 4414999, overlap 4414986 4414991 GCAGGAGAACATAAG CGCGTCAGCGCG-TGCGCG-GCTGC GATC GCAGCGCGCGCAGCTCGC-G-CGCG AGATTGGCTCGCGCC TERM 3030 4414999 - 4415044 + T 71 -13.1 -3.05384 | gap 1, opp_overlap 4414986 4414991 4414992 AACATAAGCGCGTCA GCGCGTGCGCG-GCTGCGATCG CAG CGCGCGCAGCTCGCGCGCGAGA TTGGCTCGCGCCCGC BRADO4213 4415559 - 4414996 - | HD phosphohydrolase TERM 3031 4415287 - 4415250 - G 85 -17.8 -2.64933 | GATCGATGGAGACGA GCAGCG-CGCCGCGCCGG TCGT CCGGCGCGACGTCG-TGC GTGCGGGTCAGCCGG BRADO4214 4415895 - 4415593 - | hypothetical protein BRADO4215 4417185 - 4415959 - | putative diguanylate cyclase (GGDEF) TERM 3032 4417905 - 4417926 + r 93 -18.7 -3.25823 | opp_overlap 4417905 GAAGCAAAAACAAAA CGGGCGCCC GCGA GGGCGCCCG TTCGTATGGGAGACC TERM 3033 4417926 - 4417905 - R 100 -18.7 -5.34655 | opp_overlap 4417905 GAAGCAAAAACAAAA CGGGCGCCC GCGA GGGCGCCCG TTCGTATGGGAGACC rpsI 4418455 - 4417973 - | 30S ribosomal protein S9 rplM 4418921 - 4418457 - | 50S ribosomal protein L13 BRADO4218 4419508 - 4419080 - | putative thioesterase family protein BRADO4219 4419567 - 4420400 + | enoyl-CoA hydratase TERM 3034 4420479 - 4420436 - f 100 -22.6 -3.06183 | opp_overlap 4420436 4420441 4420445, overlap 4420441 4420445 GTCATTGCGAGCGAA GCGAAGCAATCCAGAGTCCC ACCC GAGCCCCTGGATTGCTTCGC TTCGCTCGCAATGAC TERM 3035 4420436 - 4420479 + F 90 -18.2 -3.06183 | opp_overlap 4420436 4420441 4420445, overlap 4420441 4420445 GTCATTGCGAGCGAA GCGAAGCAATCCAGAGTCCC ACCC GAGCCCCTGGATTGCTTCGC TTCGCTCGCAATGAC TERM 3036 4420474 - 4420441 - f 76 -13.9 -3.19192 | opp_overlap 4420441 4420436 4420445, overlap 4420436 4420445 TGCGAGCGAAGCGAA GCAATCCAGAGTCCC ACCC GAGCCCCTGGATTGC TTCGCTTCGCTCGCA BRADO4220 4420519 - 4421103 + | hypothetical protein TERM 3037 4421145 - 4421121 - f 91 -9.3 -4.42062 | overlap 4421122 CATCTGCGAAAGAAA CGTGTCGCG GTCATGG CGCGACACA GCAACGCATTTCAAA metC 4421330 - 4422613 + | O-acetylhomoserine aminocarboxypropyltransferase TERM 3038 4422641 - 4422673 + F 72 -13.4 -2.70932 | opp_overlap 4422628 AACGCGGTCGATAGC CGCCGCAAGCATCT CTCGC AGTCGCTTGCGGCG TCCTTCGAGACCGCC TERM 3039 4422869 - 4422908 + F 70 -12.1 -3.14564 | gap 1, opp_overlap 4422870, overlap 4422872 CCCCGCGCAAAACAA AGAGAGCGCGGCCGGCCC CCCCT GGGCTT-CCGCGCTCTCC TTCGTCCCACGGTCG TERM 3040 4422907 - 4422870 - f 100 -13.4 -4.64861 | gap 1, opp_overlap 4422869 4422872 CCCGCGCAAAACAAA GAGAGCGCGGCCGGCCC CCCCT GGGCTT-CCGCGCTCTC CTTCGTCCCACGGTC BRADO4222 4423034 - 4423363 + | hypothetical protein BRADO4223 4423457 - 4423795 + | putative signal peptide TERM 3041 4424571 - 4424614 + T 75 -14.1 -3.06183 | opp_overlap 4424576 4424580, overlap 4424576 4424580 GCGAGGAGCTCAGCG ACGAAGCAATCCAGAGT CGTGGGCGGA ACTCTGGATTGCTTCGC TTCGCTCGCGATGAC TERM 3042 4424609 - 4424576 - T 70 -11.9 -3.18582 | opp_overlap 4424571 4424576 4424580, overlap 4424580 GAGCTCAGCGACGAA GCAATCCAGAGTC GTGGGCGG AACTCTGGATTGC TTCGCTTCGCTCGCG BRADO4225 4425730 - 4424642 - | putative cytochrome oxidase assembly protein; cox15-like protein BRADO4226 4425834 - 4426052 + | hypothetical protein BRADO4227 4427114 - 4426053 - | putative polysaccharide deacetylase BRADO4228 4427399 - 4428619 + | putative Acyl-CoA N-acyltransferase related protein BRADO4229 4430922 - 4428616 - | polysaccharide biosynthesis transporter TERM 3043 4430230 - 4430272 + g 70 -6 -4.25104 | overlap 4430259 GCTTTGAATTTCACC CGCGAGCCACTGGCTGGC CGACTTC GCCTGCGCCTGGCGCGCG TTTTGCTGAAGGACG TERM 3044 4430582 - 4430622 + g 72 -13.1 -3.14344 | opp_overlap 4430577, overlap 4430618 CGCGACAGCACCAGC TGCACCTGGCTCGTCACCG CCT CGGCGTCGAGCGCGGTGCG TTCCTCCGCCCGCTC BRADO4230 4431267 - 4432400 + | putative glycosyl transferase, group 1 TERM 3045 4432769 - 4432781 + G 77 -10.5 -3.91352 | TTTCGGCTATGTCGT GCCGC TCA GCGGC TTTCATTGGGAGTAT BRADO4231 4432530 - 4434083 + | putative sugar transferase family protein TERM 3046 4434125 - 4434147 + F 80 -14.2 -3.14026 | CCCGCTTCGTGCGTG TGATTGGCGG ACC CCGCCAATCG TTGCGTATGAGTGTG TERM 3047 4434364 - 4434374 + G 79 -3.2 -5.00267 | overlap 4434341 CGACCGGGATCAGGT TGCG CGC CGTA TTTCTTTTTCTCCTT BRADO4232 4434177 - 4435448 + | hypothetical protein BRADO4233 4436623 - 4435445 - | putative saccharopine dehydrogenase family protein TERM 3048 4436677 - 4436720 + r 81 -15.4 -3.06183 | gap 1, opp_overlap 4436653 4436677, overlap 4436682 GTCATTGCGGGCAAA GCGAAGCAATCCAGGG-CGGG GGA CGGGACTCTGGATTGCTTCGC TTCGCTCGCAATGAC TERM 3049 4436720 - 4436677 - R 77 -13.3 -3.53811 | opp_overlap 4436677 4436682, overlap 4436653 GTCATTGCGGGCAAA GCGAAGCAATCCAGGGC GGGGGACGGG ACTCTGGATTGCTTCGC TTCGCTCGCAATGAC BRADO4234 4437527 - 4436742 - | hypothetical protein TERM 3050 4438663 - 4438707 + G 76 -6.2 -4.57073 | gap 1, opp_overlap 4438663, overlap 4438664 GCAATGCGGCAACTA CCAGGCA-GGCTGGGCGCGAC GCGA GGCGCGCTGGGCCATGCCCGA TTTTTCGCCCGACTA TERM 3051 4439289 - 4439271 - g 83 -3 -5.12474 | opp_overlap 4439284 CACAAGAGAGAAAAA TCCGCGAC GTC ACCGCTGA TCTCACCGATTTCGC BRADO4235 4437728 - 4439575 + | TPR domain-containing protein BRADO4236 4440360 - 4439572 - | hypothetical protein BRADO4237 4440491 - 4441432 + | putative acetamidase/formamidase family protein BRADO4238 4441541 - 4442467 + | hypothetical protein BRADO4240 4443585 - 4443782 + | hypothetical protein TERM 3052 4444085 - 4444027 - g 73 -13.2 -3.30124 | gap 4, overlap 4444028 4444062 4444065 GCTGACGCGCGACAA TGGCGGCGACAGCCG--GCGCGTGG-TCCG CGC CGAAACCACGCGCGACGGCGCCCGCCGCC- CGGTGCCGAAACTGC TERM 3053 4444085 - 4444028 - g 93 -19.2 -2.57931 | gap 3, overlap 4444027 4444062 4444065 CTGACGCGCGACAAT GGCGGCGACAGCCG--GCGCGTGG-TCCG CGC CGAAACCACGCGCGACGGCGCCCGCCGCC CGGTGCCGAAACTGC BRADO4241 4443860 - 4444339 + | putative GcrA-like regulator BRADO4242 4445521 - 4444604 - | putative short-chain dehydrogenase TERM 3054 4444775 - 4444826 + g 75 -12.9 -3.40299 | opp_overlap 4444802, overlap 4444794 CTTCGCCGCCTGCGC CGCCGTCGTCG-GCGCGTCCTCGAG GAAG CT-GCGGGCGCGCTCGCGGGCGGCG TTCTGGATGTCCTGG BRADO4243 4445806 - 4445961 + | hypothetical protein TERM 3055 4446659 - 4446608 - g 72 -11.6 -3.54638 | gap 1, overlap 4446598 4446597 AGAAGGTGCCGGAAA CCGACGCAGTCGAGA-AGACGATCG AGT CGATGATCAATCTCGACGGCGCCAG CCTGCTGTTCCCGAC TERM 3056 4446744 - 4446720 - g 79 -12.9 -3.65201 | overlap 4446711 CAAGATGGCCAACAA GTACCCGAAGC TGC GCTTCGAGCAC TGCGGCGGCCTGTGG BRADO4244 4446379 - 4447488 + | ABC transporter substrate-binding protein BRADO4245 4447485 - 4448594 + | putative ABC transporter (permease protein) BRADO4246 4448598 - 4449524 + | ABC transporter permease BRADO4247 4449754 - 4450437 + | putative isochorismatase family protein BRADO4248 4450434 - 4451963 + | putative ABC transporter ATP-binding protein BRADO4249 4452536 - 4454092 + | hypothetical protein BRADO4250 4454207 - 4455766 + | putative myosin-cross-reactive antigen BRADO4251 4457416 - 4455785 - | hypothetical protein TERM 3057 4456165 - 4456185 + g 74 -12.5 -3.56092 | TGAGCGCATCGAGCG CGGCGAGGC TTG GCGTCGCCG TTTCGAAGCTGGTGC TERM 3058 4456367 - 4456332 - G 74 -10.2 -3.87815 | opp_overlap 4456332 TCGGAGTCGGAGAAA GGCGGCCGAGCCGGCG GCAT CGCGAGCGCGGCGACC TTCTCGCCGGAGCCA BRADO4252 4457999 - 4457577 - | hypothetical protein BRADO4253 4458195 - 4458046 - | hypothetical protein BRADO4254 4458309 - 4458202 - | hypothetical protein BRADO4255 4459428 - 4458520 - | transcriptional regulator BRADO4256 4460442 - 4459552 - | putative S-adenosyl-L-methionine (SAM)-dependent methyltransferase TERM 3059 4460553 - 4460532 - R 70 -7.2 -4.07568 | opp_overlap 4460531, overlap 4460548 CCGGCGCCTTGAAAA GCCGGCGT CTCGAC AAGCCGGC GTCTTCAAAAGCGGG BRADO4257 4460872 - 4460666 - | hypothetical protein BRADO4258 4461197 - 4461937 + | hypothetical protein BRADO4259 4462871 - 4461966 - | hypothetical protein BRADO4260 4463856 - 4462855 - | hypothetical protein BRADO4261 4465223 - 4463910 - | hypothetical protein BRADO4262 4466176 - 4465220 - | hypothetical protein TERM 3060 4465303 - 4465340 + gr 74 -12.5 -3.29649 | CGGCATTGGGCGCCA GCACCAGCCGGTGCCGC AGCA GCGGCACCGCCAGGAAC TTGATGTCGTCGGGT BRADO4263 4467380 - 4466145 - | putative membrane (permease) protein TERM 3061 4466266 - 4466307 + gr 82 -14.5 -3.28712 | gap 2, opp_overlap 4466245, overlap 4466267 GCGACGCGCGCGAGC G-CAGCGGCGCAGC-CGGT CCGCCA ACCGCGCTGCGCCGCGGTC TTGTCCAACCACGCG TERM 3062 4466267 - 4466305 + gr 91 -18.2 -3.21276 | gap 1, opp_overlap 4466245, overlap 4466266 CGACGCGCGCGAGCG CAGCGGCGCAGC-CGGT CCGCCA ACCGCGCTGCGCCGCGG TCTTGTCCAACCACG BRADO4264 4467970 - 4467377 - | hypothetical protein TERM 3063 4468182 - 4468163 - H 71 -5.7 -4.386 | gap 1 GAACGCTCTAGAAAA GGGCC-GA CGTAT TCTGGCCC GGCGGTCCGGAAAGG TERM 3064 4468979 - 4468990 + H 71 -5.8 -4.27617 | ATCGCGAGCGCCGCT CTGC AACA GCAG TTTTCGTGCACTGTC BRADO4266 4469234 - 4469341 + | hypothetical protein BRADO4267 4470216 - 4469419 - | transposase TERM 3065 4470025 - 4470048 + g 70 -6.6 -4.20918 | opp_overlap 4470021 4470026, overlap 4470026 CTGCGCGAGAAGATT ATCCTGCCGC ATGA GCCGCAGGAC TTTCTTGGCATTGAC BRADO4268 4470674 - 4470273 - | putative transposase ssuD 4472060 - 4470906 - | putative alkanesulfonate monooxygenase (FMNH2-dependent aliphatic sulfonate monooxygenase) TERM 3066 4471327 - 4471284 - G 81 -16.7 -3.21099 | gap 1 CCGTGCGATCACGAA GGCCGAGAGAC-CGAAGCCG AGCGG CGGCGCCGCGCCCCTCGGCC GCTCCGCGACATCGC ssuC 4472295 - 4473152 + | putative sulfonate ABC transporter, permease protein ssuB 4473149 - 4473868 + | putative sulfonate ABC transporter, ATP-binding protein ssuA 4473887 - 4474903 + | putative sulfonate ABC transporter, periplasmic-binding protein TERM 3067 4475735 - 4475756 + G 70 -11.6 -3.40403 | CGATGCCATTGCGCT GGTGCGCT CGCGCA AGCGCACC TTCTACTACGCGCCG BRADO4273 4474941 - 4476170 + | putative acyl-CoA dehydrogenase TERM 3068 4476148 - 4476161 + F 77 -3.8 -4.82901 | TCAACGGCACGCCGC TCCC GGCCAA GGGA TTTTTCTGACCGGAC BRADO4274 4476206 - 4476772 + | putative monooxygenase/flavin reductase-like, FMN-binding srpH 4476797 - 4477756 + | serine acetyltransferase (cysE-like) BRADO4276 4478145 - 4477813 - | hypothetical protein ntaA 4478234 - 4479577 + | nitrilotriacetate monooxygenase component A (NTA monooxygenase component A) (NTA-MO A) TERM 3069 4479591 - 4479625 + F 100 -17.1 -4.14598 | gap 1, opp_overlap 4479611 GAGCGCCTTTTCACG GGCGGCGCGGAATGCC AACA GGCGC-CCGCGCCGCC TTTCGTTTGGTTCAA BRADO4278 4479665 - 4480492 + | putative D-methionine ABC transporter, perisplasmic binding lipoprotein (metQ-like) TERM 3070 4480496 - 4480526 + T 83 -16.8 -2.88544 | opp_overlap 4480489 TACATGAAGTGAGCC ATCGCGGCGGTCCG TCC CGGGTCGCCGCGAA TCTCTCCGGGTCCGC BRADO4279 4481398 - 4480544 - | putative nitroreductase family protein; putative oxygen-insensitive NADPH nitroreductase (NfsA-like) BRADO4280 4482596 - 4481538 - | putative luciferase-like monooxygenase BRADO4281 4482755 - 4482657 - | hypothetical protein BRADO4282 4483126 - 4482752 - | putative ferrodoxin homolog (AsfB-like) BRADO4283 4484718 - 4483123 - | putative oxidoreductase (AsfA-like), putative L-aspartate oxidase TERM 3071 4485964 - 4485937 - g 71 -14.8 -2.52464 | GGTTCCGGCAACGGA TCGCCGCCCACA TCGC CGAGGGCGGCGA CTGGCGCGCCGTCAT BRADO4284 4485126 - 4486592 + | hypothetical protein metQ 4487350 - 4486574 - | D-methionine ABC transporter protein, periplasmic binding protein TERM 3072 4487456 - 4487471 + r 71 -5.4 -4.43397 | overlap 4487457 AGCTGCCGTTATTGT TGTTCG CGTA CGAACG TTCTTTATTTTCCGA BRADO4286 4488391 - 4487609 - | hypothetical protein metI 4489108 - 4488443 - | D-and L-methionine ABC transporter, permease protein metN 4490165 - 4489098 - | D-and L-methionine ABC transporter, ATP binding protein BRADO4289 4491220 - 4490375 - | hypothetical protein TERM 3073 4490566 - 4490552 - G 81 -11.4 -3.95435 | opp_overlap 4490552 4490551, overlap 4490547 GTCCGGAAAATAGAA CCAGCG ATG CGCTGG GTTATAGGTGACCGA BRADO4290 4491420 - 4491217 - | hypothetical protein TERM 3074 4491345 - 4491301 - G 75 -14.4 -3.34715 | opp_overlap 4491306, overlap 4491299 4491305 4491340 CAGCTGCCCGAAATA GCAACGCTCCTGCTTC-CGGGG CGG CCCCGCGTAGAAGGAGC-TTGC CTGCTGGAGGAGGCT TERM 3075 4491306 - 4491341 + g 73 -14 -3.09516 | gap 1, opp_overlap 4491305 4491301 4491299 4491340 GCCCGAAATAGCAAC GCTCCTGCTTC-CGGGG CGG CCCCGCGTAGAAGGAGC TTGCCTGCTGGAGGA BRADO4291 4491605 - 4491886 + | hypothetical protein BRADO4292 4492863 - 4491925 - | putative alpha-ketoglutarate-dependent taurine dioxygenase (TauD-like) (2-aminoethanesulfonate dioxygenase) (Sulfate starvation-induced protein 3) (SSI3) BRADO4293 4493100 - 4492894 - | hypothetical protein TERM 3076 4493036 - 4493026 - G 90 -2.4 -5.52384 | CTCGGACGAAAAAAA GCTG AAG CCGC GTTCGTCGGCCGTGA BRADO4296 4493704 - 4494096 + | putative insertion element (IS) transposase BRADO4297 4494631 - 4495818 + | acyltransferase family 3 protein BRADO4298 4495944 - 4496165 + | hypothetical protein TERM 3077 4496203 - 4496167 - f 76 -12.9 -3.53012 | TCGCGGGGGCGTAAA TCGGGGCGCACCTGG AGGCAGG CCTGAAGCGCCCCGA CCAGCCCGCATTCCC BRADO4299 4496239 - 4496616 + | hypothetical protein BRADO4300 4496869 - 4497051 + | hypothetical protein BRADO4301 4497192 - 4497398 + | hypothetical protein BRADO4302 4497901 - 4497455 - | hypothetical protein BRADO4303 4498364 - 4497951 - | hypothetical protein BRADO4304 4499001 - 4498525 - | hypothetical protein BRADO4305 4499835 - 4499119 - | hypothetical protein TERM 3078 4499289 - 4499317 + g 73 -12.5 -3.36273 | opp_overlap 4499285 4499282 4499281, overlap 4499290 GGTTAAAGGCACAGC TGATTTCGACGTC CTT GACGGCGAAATCG TTCGTGTTCCGCAGC BRADO4306 4500040 - 4500423 + | putative glyoxalase BRADO4307 4500897 - 4500436 - | hypothetical protein BRADO4308 4503717 - 4501036 - | sensor histidine kinase BRADO4309 4504633 - 4503830 - | putative NUDIX hydrolase TERM 3079 4503898 - 4503914 + g 73 -13.7 -3.21099 | GAATGCGCAGTTCGC GACCGCC GTC GGCGGTC TTGGTCATGACCGGC BRADO4310 4505589 - 4504636 - | putative dihydrodipicolinate synthetase TERM 3080 4504758 - 4504783 + g 71 -12.6 -3.29263 | gap 1, overlap 4504726 4504747 ACGCCGGCTTGCGCT GCGCGGCG-GA GGCGA TCGCGCCGCGC TTCTGCAGCACGTAT TERM 3081 4505504 - 4505489 - G 75 -9 -4.03234 | GCCTCGGCATAGAAA TCGACC AGGC GGTCGA TCGAGGTTTCGTCGA TERM 3082 4505763 - 4505753 - R 84 -8.2 -4.41956 | opp_overlap 4505752 AGACATACATCAAAA CCGC CGC GCGG ACTTTCGAATCTCGT BRADO4311 4506625 - 4505747 - | putative short-chain dehydrogenase/reductase (SDR) TERM 3083 4505948 - 4506002 + g 71 -12.2 -3.28712 | gap 3, opp_overlap 4505956, overlap 4505951 4505954 GAGGTGGCTGACCAT GTAGAGCAC-GGC-CGGCGC-GATGCC CTCC GGCGTCAGCGCCGCGCCCGGGTTCTCC TTGTAGCGCGGCAGG TERM 3084 4505954 - 4505996 + g 70 -10.6 -3.56325 | gap 3, opp_overlap 4505956, overlap 4505951 4505948 GCTGACCATGTAGAG CAC-GGC-CGGCGC-GATGCC CTCC GGCGTCAGCGCCGCGCCCGGG TTCTCCTTGTAGCGC TERM 3085 4506670 - 4506702 + r 78 -15 -3.05816 | gap 1 CCCCGCTGCCGTTTG TTC-ACCTCTCCCCG CGTG CGGGGAGAGGTCGGA TTGCATCGAAGATGC BRADO4312 4507688 - 4506828 - | putative dehydratase (MaoC-like) TERM 3086 4507776 - 4507728 - R 75 -12.4 -3.53811 | gap 1, opp_overlap 4507718 4507717 4507715 4507772, overlap 4507756 4507759 CGTAGGGTGGGCAAA GCGAGCGTGCCCACCGTCTTCTT AGCA ACGACCACGGTGGGCACGG-CGC TCCGCGCCTTTGCCC TERM 3087 4507772 - 4507784 + r 70 -10.5 -3.53811 | opp_overlap 4507728 4507759 4507756 GACCACGGTGGGCAC GGCGC TCC GCGCC TTTGCCCACCCTACG BRADO4313 4508328 - 4507939 - | hypothetical protein BRADO4314 4509476 - 4508328 - | acetyl-CoA acetyltransferase TERM 3088 4509498 - 4509519 + r 76 -7.3 -4.386 | overlap 4509500 CTCCGCTTGTCGTCG TTTCCAGCC CGAT GGTTGGAGA TTTTCTGGACCGTTG BRADO4315 4510242 - 4509985 - | hypothetical protein TERM 3089 4510407 - 4510391 - R 76 -7.9 -4.32857 | opp_overlap 4510392, overlap 4510392 TTTCGTAAAGATAAA TCTGCCC GAC GGGCAGT TTGCGCAGAGCTGCG TERM 3090 4510392 - 4510406 + r 71 -11.4 -3.53444 | opp_overlap 4510391 4510392 TTCGTAAAGATAAAT CTGCCC GAC GGGCAG TTTGCGCAGAGCTGC BRADO4316 4510918 - 4510448 - | hypothetical protein TERM 3091 4511073 - 4511051 - R 70 -10.4 -3.53811 | CGTAGGGTGGGCAAA GGCGCGACGC GAA GCGGCGCGAC GTGCCCACCATAGGG TERM 3092 4511118 - 4511136 + r 100 -17.4 -3.53811 | TCCGACGGTGGGCAC GCGCCGCC CTC GGCGGCGC TTTGCCCACCCTACG BRADO4317 4514646 - 4511155 - | indolepyruvate ferredoxin oxidoreductase TERM 3093 4511337 - 4511296 - G 73 -9.4 -3.92996 | gap 2 CGGGAGAGACAAGAA CTCGGCC-GCGATC-TCGGC ATTC GCCGGCGACAGCAGGCCGAG CACCGTCGCGACGTC BRADO4318 4514937 - 4514722 - | hypothetical protein BRADO4319 4515597 - 4514953 - | hypothetical protein TERM 3094 4516054 - 4516030 - g 77 -9.9 -4.02817 | CGTGCACAACAACAA CGAGGCGAGCA CCA CGCCGGCCTCG CAGACGGCCTCGAAG BRADO4320 4515734 - 4516177 + | hypothetical protein TERM 3095 4516236 - 4516263 + F 100 -17 -5.47159 | overlap 4516237 TGTGCCATCAGCCAC TGCGGCGGGTGA GCGA TCACCCGCCGCC TTTTTGTTTGTTGAA TERM 3096 4516237 - 4516262 + F 100 -20.5 -3.86668 | overlap 4516236 GTGCCATCAGCCACT GCGGCGGGTGA GCGA TCACCCGCCGC CTTTTTGTTTGTTGA BRADO4321 4516436 - 4516747 + | hypothetical protein TERM 3097 4516800 - 4516767 - T 100 -17.5 -3.75437 | opp_overlap 4516774 4516797, overlap 4516769 4516774 AACGATTGCAGGAAA CAGAAAAGCCGCGGC CCAC GCCGCGGCTTTTCCT CGTGCGAGACAACGA TERM 3098 4516798 - 4516769 - T 100 -22.3 -3.4582 | opp_overlap 4516774 4516797, overlap 4516767 4516774 CGATTGCAGGAAACA GAAAAGCCGCGGC CCAC GCCGCGGCTTTTC CTCGTGCGAGACAAC TERM 3099 4516793 - 4516774 - T 100 -16.4 -4.82128 | opp_overlap 4516774, overlap 4516769 4516767 GCAGGAAACAGAAAA GCCGCGGC CCAC GCCGCGGC TTTTCCTCGTGCGAG TERM 3100 4516774 - 4516793 + T 100 -16.4 -4.30576 | opp_overlap 4516774 4516769 4516767 GCAGGAAACAGAAAA GCCGCGGC CCAC GCCGCGGC TTTTCCTCGTGCGAG BRADO4322 4517633 - 4516818 - | putative methylisocitrate lyase or carboxyvinyl-carboxyphosphonate phosphorylmutase BRADO4323 4517993 - 4517679 - | hypothetical protein BRADO4324 4518069 - 4518770 + | Ars family transcriptional regulator TERM 3101 4519185 - 4519197 + G 75 -9.1 -4.10161 | overlap 4519174 TCCGCGTCGTCGTGC CCGAC CAG GTCGG TTTTGGCAAATCATC BRADO4325 4518881 - 4519885 + | putative alpha/beta hydrolase; putative prolyl aminopeptidase TERM 3102 4519898 - 4519935 + T 70 -11.9 -3.16564 | gap 1, opp_overlap 4519885 4519900 TAGCTGTTGGGAACA AACGG-CAGGGACGCGGC GGG GCCGCATCCCTGTCCGGC TTCGTGAACTCACCA TERM 3103 4519933 - 4519900 - T 100 -21.1 -4.15044 | gap 1, opp_overlap 4519898, overlap 4519885 GCTGTTGGGAACAAA CGG-CAGGGACGCGGC GGG GCCGCATCCCTGTCCG GCTTCGTGAACTCAC BRADO4326 4520190 - 4519945 - | hypothetical protein BRADO4327 4520608 - 4520267 - | hypothetical protein BRADO4328 4521050 - 4520736 - | hypothetical protein BRADO4329 4521799 - 4521086 - | hypothetical protein TERM 3104 4521434 - 4521464 + g 84 -16.9 -3.14344 | gap 1, overlap 4521458 4521461 CGCCCTGATCGTGCC GCGGCTGGTG-CCG ATCA CGGTCACCGGCCGC TTGATGGCGGCCATG TERM 3105 4521885 - 4521849 - R 86 -15.1 -3.56972 | overlap 4521845 4521851 ATCCTATCAAATTAA TACGAGGCCCGGAGTGC CTA GGAGTCCGGGCCTCGTC ACCTCGCGACTTCGC TERM 3106 4521883 - 4521851 - R 93 -17.7 -3.35849 | overlap 4521849 4521845 CCTATCAAATTAATA CGAGGCCCGGAGTGC CTA GGAGTCCGGGCCTCG TCACCTCGCGACTTC BRADO4330 4522292 - 4521972 - | hypothetical protein TERM 3107 4522790 - 4522771 - R 72 -12.2 -3.33815 | ACCGCTCGCAACGAA TTCTCGCC GCTT GGCGAGAA AGACGGGTTGAATGA BRADO4331 4524342 - 4522810 - | putative propionyl-CoA carboxylase beta chain TERM 3108 4524422 - 4524411 - H 76 -7.2 -4.27316 | opp_overlap 4524390 4524389, overlap 4524390 TTTCGGAACCGAAAA GCCG CTTT CGGC CCTGCCTGCCCGCCC TERM 3109 4524520 - 4524551 + H 70 -10 -3.57144 | overlap 4524494 TGGAACGGCCGTTCC GGCTGCCGGTTCGA CCTC TCGACCCGCCCGCC TTTCGAGCTCCGACA BRADO4332 4524568 - 4525251 + | hypothetical protein TERM 3110 4525402 - 4525456 + F 76 -5.7 -4.59773 | gap 2, opp_overlap 4525402, overlap 4525404 GTAGTTCGCGACACA CCGGCACGACGGGCAGTTGATGCATGC GCG GCATGCGA-AATTGCGCATCG-GCCTG TTTTTGCGCCTAAGC BRADO4333 4525701 - 4526003 + | hypothetical protein TERM 3111 4526215 - 4526181 - T 81 -12.9 -3.75738 | opp_overlap 4526192, overlap 4526146 4526182 CATGAGGACGAAGAA GCGGTGGGC-ACGGCGC TTC GCGCCTTTGCCCACC-C TACCAATCAGACGAT TERM 3112 4526215 - 4526182 - T 70 -13.1 -2.84961 | gap 1, opp_overlap 4526192, overlap 4526146 4526181 ATGAGGACGAAGAAG CGGTGGGC-ACGGCGC TTC GCGCCTTTGCCCACCC TACCAATCAGACGAT TERM 3113 4526192 - 4526204 + T 70 -10.5 -3.53811 | opp_overlap 4526146 4526181 4526182 AGAAGCGGTGGGCAC GGCGC TTC GCGCC TTTGCCCACCCTACC BRADO4334 4527164 - 4526244 - | putative RNA polymerase sigma subunit TERM 3114 4526494 - 4526463 - G 77 -12.3 -3.64755 | gap 1, opp_overlap 4526461, overlap 4526465 ATAGATGCTGAAGAA CAGTCCGACGTCGG CCGAC CCGACG-CGGACGG GATGTGTGGACTGGT TERM 3115 4526492 - 4526465 - G 75 -13.5 -3.40052 | gap 1, opp_overlap 4526461, overlap 4526463 AGATGCTGAAGAACA GTCCGACGTCGG CCGAC CCGACG-CGGAC GGGATGTGTGGACTG BRADO4335 4527919 - 4527161 - | putative dehydrogenase/oxidoreductase BRADO4336 4528061 - 4529266 + | putative peptidase BRADO4337 4530006 - 4529551 - | putative ABC-type ribose transport system, auxiliary component BRADO4338 4530369 - 4530022 - | hypothetical protein TERM 3116 4530750 - 4530732 - g 71 -14.6 -2.62184 | overlap 4530714 4530745 TGTTCGCCGAGATGA TCGCGCTC AAG GAGCGCGA TCACGCCGAGCTGCA BRADO4339 4530614 - 4531036 + | putative ribonucleotide reductase BRADO4340 4531047 - 4531544 + | putative cytidine/deoxycytidylate deaminase BRADO4341 4531640 - 4532047 + | hypothetical protein TERM 3117 4532936 - 4532917 - g 72 -13.6 -3.21099 | GTCGCGGAGGACGAA TTGGCCCG CCAG CGGGCCAA GCATGCCGCGCTTCG TERM 3118 4534029 - 4534074 + G 74 -9.8 -3.86015 | gap 2, opp_overlap 4534056 CACCGGCGCGCGGTC CGGCG-G-CGCCATGGGCCT GGTGAAGG AGGCCGATGGCGGCACGCTG TTTCTCGACGAGATC BRADO4343 4532758 - 4534686 + | putative sigma-54-dependent transcriptional regulator; putative transcriptional activator of acetoin/glycerol metabolism. TERM 3119 4534674 - 4534694 + T 72 -13.9 -2.79183 | TCGCGCGCTCGGCCA GCCGCGGCC GTA GTCCGCGGC TGTGCTCGGCGTCGC groEL 4536435 - 4534807 - | chaperonin GroEL TERM 3120 4536462 - 4536485 + r 72 -2.4 -4.77165 | gap 1, overlap 4536446 CCCTCTCGCCTGGTC GTT-CGCCG TTCAGGC CGGCGCGAC TTTTGTTGTCCCCCG BRADO4345 4537294 - 4536506 - | hypothetical protein BRADO4346 4538337 - 4537300 - | putative amidohydrolase BRADO4347 4538799 - 4538443 - | putative methane/phenol/toluene monooxygenase (B subunit) BRADO4348 4539933 - 4538842 - | putative methane/phenol/toluene monooxygenase (A subunit, beta chain) BRADO4349 4541052 - 4539982 - | putative ferredoxin--NAD(+) reductase; putative phenol hydroxylase (phenol 2-monooxygenase P5 component) TERM 3121 4540256 - 4540220 - G 79 -12.9 -3.67976 | overlap 4540213 4540221 GGCACGAACCGGAAA TCCGCGAGCTCCCGGCC GAT GGCCGCGAGCTCATCGA GATGGAACAGGTCCG BRADO4350 4542789 - 4541119 - | putative methane/phenol/toluene monooxygenase (A subunit, Alpha chain) BRADO4351 4543258 - 4542959 - | hypothetical protein BRADO4352 4543632 - 4543255 - | hypothetical protein BRADO4353 4544727 - 4543684 - | putative alcohol dehydrogenase (Zinc-containing)(AdhT-like) TERM 3122 4544911 - 4544893 - H 74 -13.2 -3.32844 | opp_overlap 4544893 CTGCTGATTGCACAA CTGTTCCG GGA CGGAACAG TTTTCGTAGTGCGAA TERM 3123 4544893 - 4544911 + H 95 -13.2 -4.30576 | opp_overlap 4544893 CTGCTGATTGCACAA CTGTTCCG GGA CGGAACAG TTTTCGTAGTGCGAA TERM 3124 4545033 - 4545007 - H 72 -7.2 -4.2461 | gap 1, overlap 4545009 4545010 AGCGCCACGAACAAA CAGCCGG-GCG TGCCGG CGCTCCGGCGG AACCGCGGACCGGGA BRADO4355 4545051 - 4546952 + | sigma-54-dependent transcriptional regulator HTH Fis-type family BRADO4356 4546995 - 4547435 + | hypothetical protein TERM 3125 4547485 - 4547461 - T 100 -9.2 -4.90778 | GCCACCGAAAGAAAA GCAGCGAGCC GCGCG GGCTCACGGC ACATCGCTCAGGTCA BRADO4357 4548146 - 4547493 - | hypothetical protein TERM 3126 4548406 - 4548361 - H 74 -10.4 -3.78022 | gap 2, overlap 4548362 4548397 CGCAGATCGACGAAA TCGCCGGCACGCTTGCGCGCGG CGTG CCAGACG-AAGCG-GCCGGCGG CATCCGTGGTGACCG TERM 3127 4548405 - 4548362 - H 74 -13.9 -2.86492 | gap 2, overlap 4548361 4548397 GCAGATCGACGAAAT CGCCGGCACGCTTGCGCGCGG CGTG CCAGACG-AAGCG-GCCGGCG GCATCCGTGGTGACC BRADO4359 4548505 - 4548672 + | hypothetical protein ssuA 4549678 - 4548737 - | putative alkanesulfonate ABC transporter, substrate binding protein ssuD 4550778 - 4549675 - | putative sulfonate monooxygenase (SsuD/MsuD-like) TERM 3128 4550009 - 4550036 + g 75 -15.6 -2.78816 | CGGTAGCCGGTCTGG TCCTGCAGCGCG GTGG CGCGCTCCAGGA TCTCCTGCGCCCTCG TERM 3129 4550147 - 4550104 - G 82 -15.3 -3.39803 | gap 3, overlap 4550105 CACCGACAGCGAGAA GCG-CGGCGCCGGGCGGCCGCA CTT CGCGGCCGC-CG-CGCTGACGC GGGCGACCTGCTCAC TERM 3130 4550148 - 4550105 - G 85 -18 -2.6356 | gap 1, overlap 4550104 ACCGACAGCGAGAAG CGCGGC-GCCGGGCGGCCGCA CTT CGCGGCCGCCGCGCTGACGCG GGCGACCTGCTCACG BRADO4362 4551984 - 4550800 - | putative acyl-CoA dehydrogenase ssuB 4552769 - 4551978 - | alkanesulfonate ABC transporter, ATP binding protein TERM 3131 4552379 - 4552404 + g 75 -11.9 -3.63515 | gap 1, opp_overlap 4552375, overlap 4552382 GGCCGACGAGATCGA GC-GCGGCATCG ACG CGATGCCGTTGC TTCTTGAGGATGCCC TERM 3132 4552382 - 4552400 + g 81 -14.6 -3.53712 | opp_overlap 4552375, overlap 4552379 CGACGAGATCGAGCG CGGCATCG ACG CGATGCCG TTGCTTCTTGAGGAT BRADO4364 4553776 - 4552763 - | putative alkanesulfonate ABC transporter, permease protein BRADO4365 4554845 - 4553754 - | putative alkanesulfonate ABC transporter, substrate binding protein BRADO4367 4555351 - 4555118 - | hypothetical protein BRADO4369 4556266 - 4556556 + | hypothetical protein BRADO4370 4556602 - 4557528 + | hypothetical protein BRADO4371 4557890 - 4559599 + | hypothetical protein BRADO4372 4560535 - 4559612 - | putative glutathione synthase BRADO4373 4561284 - 4560532 - | hypothetical protein BRADO4374 4563860 - 4561281 - | hypothetical protein TERM 3133 4563067 - 4563099 + g 73 -13.6 -3.25223 | gap 2, opp_overlap 4563079 CCGAGCACGTCGTCG CGGCC--GAGATCACG CAC CGTGATCTCCTGGCCG TTGATCCTGTCGATC TERM 3134 4563262 - 4563295 + g 93 -19.5 -2.74012 | opp_overlap 4563246 4563243 GGGCCGTCGGTCGAC GCGGCGGGCTGCGCG CGCG CGCTCAGCGCGCCGC TGCTTGGCGTCGTCA BRADO4375 4565909 - 4563882 - | hypothetical protein BRADO4376 4568464 - 4565906 - | hypothetical protein BRADO4377 4571043 - 4568560 - | hypothetical protein TERM 3135 4568749 - 4568704 - G 72 -11.7 -3.57144 | gap 1 GCCTTGACGTTGAAA GGTCGTGATCTGGATCG-CGGC GAC GCCGTCGACCCCGAGCGCGGCC GCATAGAGCGCGCTG BRADO4378 4571405 - 4571040 - | hypothetical protein BRADO4379 4571722 - 4571402 - | hypothetical protein BRADO4380 4572204 - 4571722 - | hypothetical protein BRADO4381 4573343 - 4572201 - | hypothetical protein TERM 3136 4573206 - 4573175 - G 85 -18 -2.52896 | overlap 4573180 GCAGCGCGTAATCGA GCAGATCGGTCGGG CCGG CCCGGCCGACCTGC AGCACGAGCTGAAAA BRADO4382 4573678 - 4573376 - | hypothetical protein BRADO4383 4574472 - 4573819 - | putative signal peptide BRADO4384 4579960 - 4574573 - | hypothetical protein BRADO4385 4581985 - 4579994 - | ATPase BRADO4386 4583229 - 4581982 - | hypothetical protein BRADO4387 4584176 - 4583226 - | hypothetical protein TERM 3137 4584048 - 4584088 + g 85 -18.1 -2.62184 | opp_overlap 4584040, overlap 4584052 GACGACACCGGGCGG CAGCGTCGGTGGGCTCGCG CCG CGCGCGCCCTCCGCCTCTG TCGTATCGACCGAAC TERM 3138 4584052 - 4584084 + g 79 -16.1 -2.97747 | opp_overlap 4584040, overlap 4584048 ACACCGGGCGGCAGC GTCGGTGGGCTCGCG CCG CGCGCGCCCTCCGCC TCTGTCGTATCGACC BRADO4388 4584937 - 4584173 - | hypothetical protein BRADO4389 4585566 - 4585042 - | putative phage tail region protein BRADO4390 4587248 - 4585578 - | putative phage tail sheath protein TERM 3139 4586701 - 4586736 + g 72 -14.8 -2.72344 | gap 1 CGCACCAGCTTCGAC TGCGCCCGCAGCACATT GTC GATGCGCTGCGGGC-CA TCCTTGACGGTCAGA TERM 3140 4587940 - 4587918 - R 74 -2 -4.87803 | gap 2, opp_overlap 4587920 4587932, overlap 4587913 TATCGGCAAACAAAA CGGCCGACGC TGCTT GCGTC--CCG CGTTCCGTCGACGAT TERM 3141 4588197 - 4588156 - R 76 -8.9 -4.2349 | gap 2, opp_overlap 4588159 4588178, overlap 4588159 CCTTCACATCGAAAA CACGCGACTCCGCAAGGAT AGGCCA ATCCTCGCGGAG-CAC-TG GTATTTCTCCAAAGG BRADO4392 4590534 - 4588225 - | putative alpha-glucosidase BRADO4393 4591633 - 4590539 - | sugar ABC transporter ATP-binding protein TERM 3142 4590641 - 4590616 - G 89 -8.9 -5.00616 | overlap 4590617 4590619 GGTCGGGCGAAAAAA GGATCGCGACG GCAT CGCCGCGACGC AGCCGCGACTGGCCG TERM 3143 4590650 - 4590617 - G 72 -11.7 -3.60048 | gap 1, overlap 4590616 4590619 GTCGGGCGAAAAAAG GATCGCGACGGCATCG CCG CGACGCAGCCGCGA-C TGGCCGTGCTGGCGC TERM 3144 4590649 - 4590619 - G 82 -15.4 -3.37655 | overlap 4590616 4590617 CGGGCGAAAAAAGGA TCGCGACGGCATCG CCG CGACGCAGCCGCGA CTGGCCGTGCTGGCG TERM 3145 4591568 - 4591540 - G 75 -15.3 -2.77523 | overlap 4591544 GGCCGACGAAGACGA CGAACTCGCCATC CCG GACGGCGAGATCG ATGCCGTGCAGCACC TERM 3146 4591564 - 4591544 - G 73 -13.3 -3.28637 | overlap 4591540 GACGAAGACGACGAA CTCGCCATC CCG GACGGCGAG ATCGATGCCGTGCAG BRADO4394 4592707 - 4591652 - | putative sugar ABC transporter, permease protein BRADO4395 4593787 - 4592711 - | putative sugar ABC transporter, permease protein BRADO4396 4595076 - 4593784 - | putative sugar ABC transporter, periplasmic binding protein TERM 3147 4595176 - 4595200 + H 76 -6.4 -4.4017 | gap 1 CCGGCGTTTCCTCAA GCGTCC-ACTC GGCT GAGCCGGACGC TTTTCTCGAGCTTGG BRADO4397 4595333 - 4596316 + | LacI family transcriptional regulator TERM 3148 4596967 - 4596982 + G 82 -6 -4.72272 | overlap 4596969 CGCGTCCTGGTCGAA GCCGGC ACTG GCCGAC TTTTTCCTGGCAACA TERM 3149 4598399 - 4598411 + G 78 -6.2 -4.57569 | opp_overlap 4598389 4598377 ACCAACCAGATGGTT CGGG ATGCG CCCG TTTTTCACGAGATCG BRADO4398 4596533 - 4598746 + | DNA-directed DNA polymerase BRADO4399 4600000 - 4598798 - | amidase TERM 3150 4600030 - 4600079 + r 71 -11.3 -3.5362 | overlap 4600030 4600031 CTCGCAAGCAGCATC CAGATTTGTTGCCAGGCGCGCTC GGGT GAGCGCGCCTGGCATGCAGTCAC TCTTTGTAGAGCTTG TERM 3151 4600031 - 4600078 + r 75 -14.8 -2.7169 | overlap 4600030 4600030 TCGCAAGCAGCATCC AGATTTGTTGCCAGGCGCGCTC GGGT GAGCGCGCCTGGCATGCAGTCA CTCTTTGTAGAGCTT ddpA 4601686 - 4600076 - | putative dipeptide ABC transporter, periplasmic binding protein TERM 3152 4601132 - 4601177 + g 75 -11.8 -3.66018 | CTTGGCCAATTCGGA GTTGACGATGACCGGCACCG GCACCA CGAGGTCGGGCATCGTCAGC TTGTTGAACTGATCG BRADO4401 4603187 - 4601733 - | putative amidase dppF 4604169 - 4603177 - | putative dipeptide ABC transporter, ATP-binding protein ddpD 4605128 - 4604166 - | putative dipeptide ABC transporter, ATP-binding protein TERM 3153 4604729 - 4604743 + g 72 -8.5 -4.13767 | GCACCCGCGCCAGTG CGGCG ATCGC CGCCG TTTTCAGCTCGCGCC ddpC 4605979 - 4605128 - | putative dipeptide ABC transporter, permease protein TERM 3154 4605756 - 4605703 - G 72 -13.9 -2.94695 | gap 1, overlap 4605699 4605736 4605752 4605754 CGACCACGAAGGACA GCGCCACTGCCGACAC-CGCCATG CCGAGAT CAAGGCGCGTGGCGACAATGACGC GGCTCAGGATGTCGC ddpB 4606996 - 4605983 - | putative dipeptide ABC transporter, permease protein BRADO4406 4607890 - 4607336 - | putative HTH-type transcriptional regulator TERM 3155 4608499 - 4608533 + H 74 -5.8 -4.49756 | gap 1 CCTGCGGCATCTTCG CCATTCGTTGCCTCG TTCAGC TGAGGTA-CGGATGG TTTTCGTGTTTGCCG TERM 3156 4609719 - 4609704 - g 72 -4.6 -4.4891 | TGGACTATCAGAAAA TCGTGC TTCG GCGCGA GGCGTTCCGCGGGGC BRADO4407 4608641 - 4610041 + | putative amidase BRADO4408 4610995 - 4610225 - | putative amidotransferase/amidase BRADO4409 4611794 - 4611006 - | alpha/beta-hydrolase domain-containing protein TERM 3157 4611895 - 4611917 + r 85 -6.2 -5.00616 | opp_overlap 4611890 4611893, overlap 4611890 4611895 GTGGACGAGAGCAGG CGGTCCTGAT CTG ATCAGGCCGG TTTTTTGACAGAACC BRADO4410 4613200 - 4612124 - | putative regulator (HTH, AraC-type) BRADO4411 4616428 - 4613276 - | AcrB/AcrD/AcrF family mulitdrug efflux protein BRADO4412 4617590 - 4616439 - | AcrB/AcrD/AcrF family mulitdrug efflux protein BRADO4415 4619424 - 4618831 - | MerR family transcriptional regulator TERM 3158 4619334 - 4619317 - G 83 -12.7 -4.07568 | CCGCGTCTCCCAAAA CCGCAGC ACGT GCTGCGG AATGTCGAGCTCCTG ihfA 4619863 - 4619504 - | integration host factor alpha-subunit (IHF-alpha) fabH 4620973 - 4619999 - | 3-oxoacyl-(acyl carrier protein) synthase III plsX 4622031 - 4620970 - | putative glycerol-3-phosphate acyltransferase PlsX BRADO4419 4622974 - 4622348 - | hypothetical protein BRADO4420 4623516 - 4622971 - | putative basic FGF-repressed Zic binding protein BRADO4421 4623648 - 4624139 + | hypothetical protein TERM 3159 4624808 - 4624754 - g 72 -13 -3.14132 | gap 3 GCCGCGCCTGATCAA GCTTCTGGC-CAGCGACGAGACCATCG CGGT CGCCGGCCCCGT-GCTGCGCCAGA-GC AACCGTCTGGACGAA BRADO4422 4624509 - 4625591 + | hypothetical protein TERM 3160 4625651 - 4625613 - T 74 -10.3 -3.73816 | gap 1, opp_overlap 4625619, overlap 4625619 AACACGATATCGAAA TGAC-AAGACCCCGCGGC TCGC ACCGCGGGGTCTTTGTTT GAAGTGCCGTTCCGT TERM 3161 4625644 - 4625619 - T 100 -18.3 -3.62011 | opp_overlap 4625619, overlap 4625613 ATATCGAAATGACAA GACCCCGCGGC TCGC ACCGCGGGGTC TTTGTTTGAAGTGCC TERM 3162 4625619 - 4625644 + T 100 -17.6 -4.44046 | opp_overlap 4625613 4625619 ATATCGAAATGACAA GACCCCGCGG CTCGCA CCGCGGGGTC TTTGTTTGAAGTGCC hppA 4627790 - 4625670 - | membrane-bound proton-translocating pyrophosphatase TERM 3163 4625733 - 4625751 + g 76 -16 -2.83271 | overlap 4625730 4625735 CTTGATCATCGGGTT CACCGCGG GGC CCGCGGTG TCCTTGTAGGGATCG TERM 3164 4627080 - 4627047 - G 70 -10.9 -3.62046 | overlap 4627050 CGATTTGGCGAAGAA GATCGCGGCCAGCAC CATG GTGGCGACCGCGGTC ACCGCGTAGGTCTCG TERM 3165 4627143 - 4627100 - G 70 -13 -3.02511 | opp_overlap 4627100 4627101 CGTAGGTCTCGAACA GGTCGGCCGCCATGCCGGCG CAGT CGCCGACATTGTCGCCGACG TTGTCGGCGATGGTC TERM 3166 4627100 - 4627143 + g 73 -13 -3.30441 | opp_overlap 4627100, overlap 4627101 CGTAGGTCTCGAACA GGTCGGCCGCCATGCCGGCG CAGT CGCCGACATTGTCGCCGACG TTGTCGGCGATGGTC TERM 3167 4627101 - 4627142 + g 77 -16.5 -2.5805 | opp_overlap 4627100, overlap 4627100 GTAGGTCTCGAACAG GTCGGCCGCCATGCCGGCG CAGT CGCCGACATTGTCGCCGAC GTTGTCGGCGATGGT thiL 4628987 - 4627995 - | thiamin-monophosphate kinase nusB 4630132 - 4629626 - | transcription antitermination protein NusB TERM 3168 4629822 - 4629876 + g 72 -13 -3.214 | gap 3, overlap 4629820 GCGCGCAGGATGGCC TCGATCCGCTGCAGCGGCCAGCCGCGC TCCA GCGCGG-T-GTC-CAGCACCGGATCGA TCTTGGTCTGGTCGC ribH 4630625 - 4630134 - | riboflavin synthase subunit beta TERM 3169 4630184 - 4630200 + g 87 -15.1 -3.7732 | CGGCGAGCGCAGCGC GGGCGGC ATC GCCGCCC TTGTTCATCTCGGAG ribC 4631453 - 4630845 - | riboflavin synthase subunit alpha ribD 4632604 - 4631453 - | bifunctional: diaminohydroxyphosphoribosylaminopyrimidine deaminase (N-terminal); 5-amino-6-(5-phosphoribosylamino) uracil reductase BRADO4429 4633086 - 4632601 - | transcriptional regulator NrdR glyA 4634401 - 4633100 - | serine hydroxymethyltransferase TERM 3170 4633655 - 4633679 + g 73 -12.7 -3.38272 | opp_overlap 4633651 ATTCCAGAGCATCAG GCCGCCGCGCG GAC CGCGCAGCGAC TTATGGGTCGTGGTG BRADO4431 4635047 - 4634607 - | hypothetical protein TERM 3171 4634951 - 4634989 + g 81 -11.7 -3.9941 | gap 1 TCTCGACCATCACCG CTGCGGCAGCCGCTGGCG TCGC CGC-ATCGGTTGCCGGAG TTTCGTTCTGGGAGC TERM 3172 4635114 - 4635072 - R 100 -13 -5.00616 | gap 1, opp_overlap 4635072 4635072 4635079, overlap 4635076 CTCGCCCCCAAAAAA CGAACAACCTGCATGAAAC TCGACG GTCTCATACAGGTTGT-CG GTATTATGAGGCAAG TERM 3173 4635111 - 4635076 - R 86 -13.5 -3.93166 | opp_overlap 4635072 4635072 4635079, overlap 4635072 CCCCCAAAAAACGAA CAACCTGCATGAAAC TCGACG GTCTCATACAGGTTG TCGGTATTATGAGGC BRADO4432 4635382 - 4635161 - | hypothetical protein TERM 3174 4635413 - 4635437 + r 77 -12.9 -3.61715 | TGATCAGGCCTGACG GGCCATCTCGA ACA TCGAGATCGCC TTGTTGGCCAGCCTG BRADO4433 4635625 - 4635401 - | hypothetical protein TERM 3175 4635753 - 4635730 - R 100 -17.4 -5.22006 | CCATCATAAGAAAAA GCGCCGGCCC GTGA GGGCCGACGC GGAGTCGAACTCAGA BRADO4434 4636346 - 4635834 - | MarR family transcriptional regulator BRADO4435 4637173 - 4636706 - | hypothetical protein hemB 4637439 - 4638500 + | delta-aminolevulinic acid dehydratase BRADO4437 4638663 - 4639211 + | hypothetical protein BRADO4438 4639330 - 4640106 + | arginyl-tRNA-protein transferase BRADO4439 4641537 - 4640155 - | manganese transport protein MntH BRADO4440 4641738 - 4642529 + | putative 3-demethylubiquinone-9 3-O-methyltransferase BRADO4441 4642620 - 4643846 + | MFS family multidrug resistance protein BRADO4442 4644277 - 4643843 - | putative universal stress protein (Usp) BRADO4443 4645611 - 4644337 - | putative adenylate/guanylate cyclase arsC 4646056 - 4645646 - | arsenate reductase (arsenical pump modifier) TERM 3176 4646100 - 4646081 - H 81 -10 -4.19746 | gap 1 CCGACTTCAAAAGAA GCGCGTCCT ATG AGG-CGCGC CATCCATGTTAGCAC BRADO4445 4646256 - 4647074 + | putative thiosulfate sulfurtransferase (ChrB/GlpE-like) TERM 3177 4647107 - 4647130 + G 81 -14.6 -3.53761 | opp_overlap 4647107 ACTGCCCCCACTGAA GCTGATGCCG GCCA CGGCGTCAGC TTTGCCGAGGCCTTC BRADO4446 4647071 - 4648462 + | putative chromate transporter (ChrA-like) BRADO4447 4649446 - 4648472 - | CDF family cation efflux system protein TERM 3178 4649579 - 4649635 + r 72 -4.3 -4.57353 | gap 4, overlap 4649576 4649576 4649634 CATCCTGTGGCTATG GGTC-CCGGGTC-GGC--GCCCCACGCGC TAT GCGCGCGGGGCTTGCCCGGGACGACGACC TTTTCTGTCGTCGCG parC 4651948 - 4649696 - | DNA topoisomerase IV subunit A TERM 3179 4651316 - 4651334 + g 70 -5.9 -4.1899 | CCAGCGCAGTAGCGC GCGCGAC TTGGC GTCGGGC TTTTCGATCAGATGC cpo 4652313 - 4653143 + | non-heme chloroperoxidase (chloride peroxidase) (CPO-P) (chloroperoxidase P) BRADO4451 4653953 - 4654171 + | hypothetical protein BRADO4453 4654455 - 4654637 + | hypothetical protein BRADO4454 4655331 - 4654708 - | putative glutathione S-transferase BRADO4455 4657147 - 4655558 - | putative fumarate reductase flavoprotein BRADO4456 4658822 - 4657161 - | hypothetical protein TERM 3180 4659899 - 4659873 - g 80 -13.7 -3.65351 | overlap 4659874 TGATGCTCATCGAAA TGGTTCGCGCG CAAGC CGCGCGAACCT TGACCGGGCCGCGCC TERM 3181 4659898 - 4659874 - g 80 -17.2 -2.78996 | overlap 4659873 GATGCTCATCGAAAT GGTTCGCGCG CAAGC CGCGCGAACC TTGACCGGGCCGCGC BRADO4457 4658972 - 4660030 + | LysR family transcriptional regulator BRADO4458 4660460 - 4660050 - | hypothetical protein yqjG 4661454 - 4660468 - | glutathione S-transferase recO 4662219 - 4661473 - | DNA repair protein RecO TERM 3182 4661692 - 4661721 + g 78 -14.2 -3.53224 | opp_overlap 4661667 4661666, overlap 4661693 GTCGGCCCATGGCGC GCCGGCGGTGCG CGAGAC CGCGCCGCCGGA TTTCGGCGAGACGTA TERM 3183 4661693 - 4661720 + g 85 -17.7 -2.71791 | opp_overlap 4661667 4661666, overlap 4661692 TCGGCCCATGGCGCG CCGGCGGTGCG CGAGAC CGCGCCGCCGG ATTTCGGCGAGACGT TERM 3184 4662290 - 4662344 + r 100 -18.6 -3.53811 | opp_overlap 4662290 CGTAGGGCGGGCAAA GCGCAGCGGGCCCACCAGTGG-CAGG ACCGC CCGGATCGC-GGTGGGCACGCTGCGC TTTGCCCACCCTACC TERM 3185 4662344 - 4662290 - R 91 -16.3 -3.53811 | gap 1, opp_overlap 4662290 CGTAGGGCGGGCAAA GCGCAGCGGGCCCACCA-GTGGCAGG ACCG CCCGGATCGCGGTGGGCACGCTGCGC TTTGCCCACCCTACC BRADO4461 4662749 - 4662369 - | hypothetical protein era 4663675 - 4662752 - | GTP-binding protein Era rnc 4664738 - 4663665 - | ribonuclease III (modular protein) TERM 3186 4664049 - 4664070 + g 75 -13.7 -3.29471 | gap 1, opp_overlap 4664014 CAGCCGCGCGCCGGC GC-CGGCGCC AAC GGCGCCGAGC TTGATGTCATCCAGC lepB 4665496 - 4664735 - | Signal peptidase I (SPase I) (leader peptidase I) acpS 4666202 - 4665783 - | 4'-phosphopantetheinyl transferase pdxJ 4666969 - 4666199 - | pyridoxal phosphate biosynthetic protein PdxJ TERM 3187 4666592 - 4666565 - G 73 -14.2 -3.14132 | gap 1, opp_overlap 4666587 4666587 GTCGGCGGCGATGAA CAGCGAGACCCGG ATG CCG-GCCTCGCTG AGCCGGGCGATCGCC relA 4669343 - 4667052 - | GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase) (ppGpp synthetase I) ((P)ppGpp synthetase) TERM 3188 4667322 - 4667289 - G 78 -13.8 -3.53224 | opp_overlap 4667278 GATGCGCGCCGGAAA GCGCTGGGGCGTGG TTTCAT CGACGTCCCAGCGC ACGTCGAGCCAGCGC TERM 3189 4667509 - 4667539 + g 100 -14 -4.56597 | gap 1, overlap 4667508 GGAATCGCGAATGCG CCGC-GCGCCGGC TCGGTT GCCGGTGCCGCGG TTTTTGCAGCCGGCG TERM 3190 4669255 - 4669312 + g 77 -16.3 -2.78935 | gap 3, overlap 4669250 CGCGAGCGCGGCTTC GGC-GGCCGCGGCCG-CTCAGCCGGCGG CGCCA CCGC-GGCTGATTCGGCCGCCGCCTGCA TCTGCTGAGGAGTGT TERM 3191 4669469 - 4669437 - R 100 -20.7 -3.6003 | overlap 4669443 GAAATGACGTTCAAA TGCAAAGGCCCGGAC GAT GTCCGGGCCTTCACA ATCTCACAAGTTAAT TERM 3192 4669463 - 4669443 - R 100 -18.3 -3.84719 | overlap 4669437 ACGTTCAAATGCAAA GGCCCGGAC GAT GTCCGGGCC TTCACAATCTCACAA rpoZ 4669907 - 4669515 - | DNA-directed RNA polymerase subunit omega BRADO4470 4670252 - 4670902 + | hypothetical protein TERM 3193 4671143 - 4671168 + G 71 -14.7 -2.62184 | CCGCACCGGCCGGCC GTTCACCGGCG ATTA CGCCGGCGAAC TGCTGTACGGCACGC TERM 3194 4671419 - 4671443 + G 75 -9.3 -4.13767 | gap 1 GCTGCTGAAGCTCCT CGGC-CTGCG CGCCGC CGCAGCGCCG TTTTCCCATGGCGCC BRADO4471 4670952 - 4671587 + | putative uracil-DNA glycosylase TERM 3195 4671664 - 4671632 - T 95 -20.6 -3.28712 | opp_overlap 4671634 GCGCGGTGCCCATAA CTGCGCCCTCTCCC CTTGT GGGAGAGGGCGCTG TATCGGACAGCGTTC TERM 3196 4671634 - 4671662 + T 100 -21.8 -2.87211 | opp_overlap 4671632 GCGGTGCCCATAACT GCGCCCTCTCCC CTTGT GGGAGAGGGCGC TGTATCGGACAGCGT BRADO4472 4672423 - 4671839 - | putative thiol-specific antioxidant related protein (thiol peroxidase Bcp) smpB 4672991 - 4672518 - | SsrA-binding protein TERM 3197 4672813 - 4672853 + g 70 -11.3 -3.53012 | TTGATCAGCCATATC TCGCCG-TCGCGGGAATCC GCATA GGATTCC-GCGATCGTCGA TTTGCCGCCGCGGAC mscL 4673409 - 4672993 - | mechanosensitive channel TERM 3198 4673191 - 4673245 + g 80 -17.2 -2.71364 | GAGCACGGCGCCCTG CTTCTTTGCGTCCGCCAGGTTGGTCG CAG TGACCGACTTGGCGAGCGGAATGAAG TAGTTCGAAAAGTCC dapA 4674338 - 4673448 - | dihydrodipicolinate synthase TERM 3199 4674180 - 4674216 + g 73 -14.3 -3.17212 | GTCATGGCTCAAGGT CGGACTCTCGCCGGTCG TGC CGACTGGCACGAGGCCG TTGGTCCCCTCATCG TERM 3200 4676761 - 4676733 - g 100 -20.3 -3.29144 | CGATCCTGTGTATAA CGCCCAGCTCGGC GCG GCCGAGCTCGGCG GCCTGCTCGAGGACT BRADO4476 4674688 - 4677033 + | putative soluble lytic transglycosylase (SLT); putative signal peptide TERM 3201 4677268 - 4677299 + T 77 -12.9 -3.58533 | overlap 4677269 4677294 CATCTTCTCATGAGG CTGCGCCGGCGAC TCACTC GCCGCCGGCGCAC TTTCCGCGCTTCTGC TERM 3202 4677269 - 4677298 + T 81 -16.4 -2.74799 | overlap 4677268 4677294 ATCTTCTCATGAGGC TGCGCCGGCGAC TCACTC GCCGCCGGCGCA CTTTCCGCGCTTCTG BRADO4477 4677634 - 4677320 - | hypothetical protein TERM 3203 4678143 - 4678107 - R 71 -13.2 -3.04144 | gap 1, opp_overlap 4678116, overlap 4678111 CTGCGAGGCTCAACA GC-AATGTGAGCTGAGC TCCG GCTCATCTCACATTCGC GGCATGAACCCGAGC TERM 3204 4678138 - 4678111 - R 74 -12.8 -3.36749 | opp_overlap 4678116, overlap 4678107 GAGGCTCAACAGCAA TGTGAGCTGAGC TCCG GCTCATCTCACA TTCGCGGCATGAACC BRADO4478 4679812 - 4678319 - | putative porin precursor TERM 3205 4680385 - 4680360 - R 100 -21.9 -5.35224 | opp_overlap 4680355 4680354 TCGACAAAAATAAAA GCCCCCGGCAG TGAC CTGCCGGGGGC TCGAAGTTGATTGCG BRADO4479 4681972 - 4680410 - | putative porin precursor BRADO4481 4683259 - 4683059 - | hypothetical protein BRADO4482 4683886 - 4683620 - | hypothetical protein TERM 3206 4684070 - 4684052 - R 76 -5.8 -4.65747 | opp_overlap 4684056, overlap 4684054 GAAGCCTGAACAAAA GCCGGCCG ATG CGTCGGGC CACGACGCAAACGCT BRADO4483 4684584 - 4684090 - | trans-splicing factor Raa3 (fragment) TERM 3207 4684974 - 4684952 - R 78 -14.8 -3.05384 | overlap 4684917 4684963 GTGCGGCTGACGCAA CGCGCGAAGC AGC GCGTCGCGCG ACAACAAAATCGAAA TERM 3208 4685011 - 4684984 - R 73 -3.2 -4.77165 | overlap 4684979 4684963 4684985 4684990 CGCGCGACAACAAAA TCGAAAGCGCCG ATCT CGCCGCCGTCGC GCCCGCTACTAATAG TERM 3209 4685066 - 4685030 - R 73 -13.1 -3.12449 | opp_overlap 4685040 4685041, overlap 4685028 4685041 4685043 CGCTACTAATAGACA TCGCAAGAAAAGCCTGC GCT GCAAGCATTTCCTGCAA GCACGCAGATCGCGA TERM 3210 4685055 - 4685041 - R 83 -7.8 -4.66987 | opp_overlap 4685040 4685041, overlap 4685030 4685028 4685043 GACATCGCAAGAAAA GCCTGC GCT GCAAGC ATTTCCTGCAAGCAC TERM 3211 4685211 - 4685222 + r 77 -2.2 -5.03314 | overlap 4685188 4685186 CGCGTTCGGACGCGC GTCA ACGG TGGC TTTTTTGCGAATCGC TERM 3212 4685297 - 4685274 - R 100 -19.6 -4.41494 | opp_overlap 4685290 4685291 GAGCGCCAAGCAAAA CGGCGCGCAC CTTC GTGCGCGCCG TCGGAACGAAGATCC gatB 4686842 - 4685325 - | aspartyl/glutamyl-tRNA amidotransferase subunit B BRADO4487 4687058 - 4687705 + | hypothetical protein BRADO4488 4687999 - 4687709 - | hypothetical protein gatA 4689471 - 4687996 - | aspartyl/glutamyl-tRNA amidotransferase subunit A TERM 3213 4688402 - 4688426 + g 71 -12.1 -3.27653 | opp_overlap 4688374, overlap 4688400 4688403 ACGCGGCGGCGGACT TCGGCGCCGAA ACC TTCGGCGCGGG TGTTCTCGTACAGCT BRADO4490 4689701 - 4689468 - | hypothetical protein TERM 3214 4689760 - 4689731 - R 70 -12.2 -3.14132 | gap 1 TGTCGGTTGGAGGAA CAGAT-GGCGCGC GAGGA GCGCGCCGACCTG CCCTGGCTATTCCAC gatC 4690054 - 4689767 - | aspartyl/glutamyl-tRNA amidotransferase subunit C BRADO4492 4691250 - 4690174 - | putative 2-nitropropane dioxygenase TERM 3215 4690373 - 4690357 - G 70 -10.8 -3.57144 | TGCCGCATGCGGAAA CGCCGG CGCGT CCGGCG AGACCGGCCCGACCT BRADO4493 4692252 - 4691269 - | putative 2-nitropropane dioxygenase BRADO4494 4692359 - 4693249 + | LysR family transcriptional regulator BRADO4495 4693477 - 4694412 + | putative cyclase BRADO4496 4696171 - 4694594 - | putative ABC transporter, ATP-binding protein TERM 3216 4695279 - 4695311 + g 75 -14.2 -3.33492 | gap 2, overlap 4695282 4695283 GCCTCGCTGATCATG CGCTCGGCGAGCCGCT GCG AGCGGC-CGCCG-GTG TTCTCCGCTCGCTCG TERM 3217 4695282 - 4695309 + g 80 -15.6 -3.23572 | gap 1, overlap 4695279 4695283 TCGCTGATCATGCGC TCGGCGAGCCGCT GCG AGCGGC-CGCCGG TGTTCTCCGCTCGCT TERM 3218 4695283 - 4695308 + g 80 -16.9 -2.53822 | gap 1, overlap 4695282 4695279 CGCTGATCATGCGCT CGGCGAGCCGCT GCG AGCGGC-CGCCG GTGTTCTCCGCTCGC BRADO4497 4696343 - 4696828 + | putative Holliday junction resolvase BRADO4498 4696833 - 4697762 + | hypothetical protein BRADO4499 4698499 - 4697759 - | CAAX family protease TERM 3219 4698091 - 4698062 - G 85 -6.3 -4.89233 | gap 1 CAGGAACAGGAAAAA GGCCA-GCGGACCA TCG CGGCGCGCACGGCC GAGTTCGGCGACAAC BRADO4500 4699399 - 4698575 - | CAAX family protease aidB 4701039 - 4699396 - | isovaleryl CoA dehydrogenase (adaptive response to DNA-methylation damage) TERM 3220 4700811 - 4700834 + g 73 -13.2 -3.32946 | overlap 4700809 GGCGAAAACCCTTGG CGTCGAAGCT GCGC AGCTTCGGCG TGTTCTCGTTGGCCA pyrB 4701291 - 4702244 + | aspartate carbamoyltransferase catalytic subunit pyrC 4702268 - 4703569 + | dihydroorotase BRADO4504 4703600 - 4704196 + | putative glycerol-3-phosphate acyltransferase PlsY TERM 3221 4704956 - 4704977 + G 71 -12.3 -3.28712 | AGAGGCCTCGTTCCG CGCGCTGAT GGTG ATCGGCGCG TTCTCGCCCGCCAGC BRADO4505 4704411 - 4705694 + | putative phospholipase TERM 3222 4706161 - 4706196 + G 78 -14.6 -3.24188 | opp_overlap 4706159 GCGGGGCTCAAATTT GCTGGCCTGCTCGCGC ATGA GCTCGGACAGGCCGGC TTCATCATCATCTCC DprA 4705759 - 4706874 + | DNA processing chain A (DprA/Smf) BRADO4507 4707050 - 4706886 - | hypothetical protein TERM 3223 4707743 - 4707697 - g 77 -4.2 -4.7373 | opp_overlap 4707708 4707735, overlap 4707698 4707699 GGAGGCGATGAAAAA CCCGCGCCAGATCGACGGCG CGCTGGT CGACGCCTATATGGCGCGCC GCGCCCTCGATTACC topA 4707320 - 4710067 + | DNA topoisomerase I TERM 3224 4710122 - 4710083 - g 89 -8.5 -5.08483 | gap 1, opp_overlap 4710084, overlap 4710084 4710085 GAAAATGAAACAAAA GCGCGACATCGGCTTCCC TCCGC GGGAGGCCATCGTCGC-C TTCATCCGCGCCAAT rnr 4710072 - 4712471 + | ribonuclease R BRADO4510 4712468 - 4712923 + | hypothetical protein BRADO4511 4712963 - 4713721 + | putative NUDIX hydrolase TERM 3225 4713859 - 4713825 - f 79 -10.7 -3.85698 | gap 1 TGGGCGCTCTACAAA CGGTGT-CGTCCCGGC GAAC GCCGGGACCCATACCG CGGACTCTGTCTTAG ntaA 4714109 - 4715434 + | nitrilotriacetate monooxygenase component A (NTA monooxygenase component A) (NTA-MO A) rpmG 4715554 - 4715721 + | 50S ribosomal protein L33 TERM 3226 4715748 - 4715766 + F 100 -17.4 -5.06414 | overlap 4715745 TGCTTTCGACTTCGA CGGGGCCG TTT CGGCCCCG TTTTTATTGCGGAGG BRADO4514 4715944 - 4717296 + | putative chemotaxis sensory transducer BRADO4515 4717540 - 4717310 - | hypothetical protein TERM 3227 4717586 - 4717569 - R 73 -8.3 -4.03234 | TGGGCCCGAGACAAA CGCCCGC AGCG GCGCGCG GTTCCGGGGCAAGTT BRADO4516 4718214 - 4717801 - | hypothetical protein TERM 3228 4718287 - 4718263 - R 100 -15 -4.86731 | gap 1 CGTGGCCAAACAAAA GGCCCCGTCCG ATGC CGG-CGGGGCC TGGTGGAATGATCGT BRADO4517 4719189 - 4718800 - | hypothetical protein TERM 3229 4719260 - 4719236 - R 100 -12.7 -4.4773 | CGAGACCAATCAAAA GGCCCCGTCCG ATG CTGGCGGGGCC TGGTAGAAACATCGC BRADO4519 4720004 - 4719648 - | DNA gyrase subunit B GyrB (fragment) pleD 4722239 - 4720818 - | response regulator PleD BRADO4521 4722617 - 4722252 - | putative response regulator in two-component regulatory system (CheY-like protein) BRADO4522 4722836 - 4723135 + | hypothetical protein TERM 3230 4724415 - 4724380 - g 76 -8.8 -4.20516 | overlap 4724381 GCGCTACGCAAGAAA TTCGGCCAGGCCGCGG TGAT CCGCGGCATCGCCTAT GGCGGGCCGGAGGAG dinB 4723141 - 4724439 + | DNA polymerase IV BRADO4524 4725308 - 4724448 - | hypothetical protein TERM 3231 4724691 - 4724712 + g 71 -12.3 -3.28712 | gap 1 GTCATTGTCGGTCGA GGCGTCCGGC TTG GCCGGA-GCC TTGTCGCCCGGCACC BRADO4525 4725514 - 4725981 + | putative endoribonuclease L-PSP (protein synthesis inhibitor) TERM 3232 4726093 - 4726127 + G 77 -13.4 -3.57462 | opp_overlap 4726092 4726094, overlap 4726094 GGCATTATCGAGAAC ATGCCGGCCGCCGCGC GCG GCGCGATCGCCGGCAA TTTCGCCATCGAATG TERM 3233 4726094 - 4726126 + G 80 -16.9 -2.74263 | opp_overlap 4726092 4726094, overlap 4726093 GCATTATCGAGAACA TGCCGGCCGCCGCGC GCG GCGCGATCGCCGGCA ATTTCGCCATCGAAT TERM 3234 4726126 - 4726094 - g 86 -16.9 -3.25896 | opp_overlap 4726094 4726093, overlap 4726092 GCATTATCGAGAACA TGCCGGCCGCCGCGC GCG GCGCGATCGCCGGCA ATTTCGCCATCGAAT BRADO4526 4726012 - 4726764 + | putative glycerophosphoryl diester phosphodiesterase TERM 3235 4727445 - 4727461 + G 73 -3.6 -4.62471 | overlap 4727447 ACCGACCAGCAGTTC CACTGG CACAA CCAGGG TTTTTCCAGCTTCGA BRADO4527 4726878 - 4728086 + | hypothetical protein TERM 3236 4728563 - 4728536 - g 74 -14.9 -3.02461 | overlap 4728539 GAAGGTGCTGGAAGA GAACGCCGCGA AGCTGA TCGCGGCGCTC AAGGGCTGATCACGG TERM 3237 4728560 - 4728539 - g 79 -13 -3.65812 | overlap 4728536 GGTGCTGGAAGAGAA CGCCGCGA AGCTGA TCGCGGCG CTCAAGGGCTGATCA BRADO4528 4728147 - 4728572 + | putative Hit (histidine triad) family protein nadC 4729428 - 4728580 - | nicotinate-nucleotide pyrophosphorylase TERM 3238 4728685 - 4728645 - G 85 -17.6 -2.64735 | gap 1 AGCCGACCGAGATCA GGTCGACACC-CGCCGCCG CGAT CGCCGGCGCGGTGTCGACG GTGATCCGGCCCGAG nadB 4730978 - 4729425 - | L-aspartate oxidase nadA 4731961 - 4730975 - | quinolinate synthetase BRADO4532 4732986 - 4732030 - | putative nicotinic acid mononucleotide (NMN) biosynthesis protein virR 4733477 - 4733001 - | hypothetical protein BRADO4534 4733893 - 4733549 - | hypothetical protein TERM 3239 4733671 - 4733633 - G 79 -11.7 -3.85698 | overlap 4733612 4733634 GCGCGTCGCCAGAAA GGCC-GCGAGCCCGGCG ACCACCG CGCCGTGC-CGCAGGCC CCACGGCACGCTGGC BRADO4535 4734636 - 4733890 - | putative permease BRADO4536 4735764 - 4734739 - | putative transglycosylase TERM 3240 4736266 - 4736282 + G 75 -11.5 -3.67597 | overlap 4736239 GCGAGGGCCGCGTCG GCGCGGT CGG GCCGCGC TTCTTCGGTGCGCCG BRADO4537 4735857 - 4736789 + | hypothetical protein BRADO4538 4736903 - 4737364 + | hypothetical protein nitA 4738393 - 4737380 - | aliphatic nitrilase BRADO4540 4738590 - 4739546 + | AraC/XylS family transcriptional regulator BRADO4541 4739600 - 4739761 + | hypothetical protein BRADO4542 4739784 - 4740131 + | putative cytochrome c-552 TERM 3241 4740700 - 4740735 + G 73 -13.3 -3.31144 | opp_overlap 4740725 CGATGGTGGTCGCGG TGTCGGCGGCCGTTG GCCCGA CAATCGCCGCCGGCA TTCTCGCGGTCGGCA BRADO4543 4740231 - 4741661 + | MFS family transporter TERM 3242 4742337 - 4742373 + G 76 -15.1 -3.14132 | overlap 4742363 CGTGCACTGGCTGGA GACGCTGACCATGATGG CCG CCGCCATGGTCGGCGGC TTCGTCGGCGCCCGG BRADO4544 4741720 - 4742481 + | hypothetical protein TERM 3243 4742701 - 4742671 - T 85 -15.5 -3.4582 | opp_overlap 4742677, overlap 4742677 CGACGCTACCAAACA GAAAAAGGCCGGC GCGAA GCCGGCCTTTCCC TTTAATGCTCTCGTC TERM 3244 4742695 - 4742677 - T 100 -13.1 -5.22289 | opp_overlap 4742677, overlap 4742671 TACCAAACAGAAAAA GGCCGGC GCGAA GCCGGCC TTTCCCTTTAATGCT TERM 3245 4742677 - 4742695 + T 83 -13.1 -3.87551 | opp_overlap 4742671 4742677 TACCAAACAGAAAAA GGCCGGC GCGAA GCCGGCC TTTCCCTTTAATGCT clpA 4745110 - 4742723 - | ATP-dependent specificity subunit of clpA-clpP serine protease TERM 3246 4744582 - 4744592 + g 79 -2.4 -5.08601 | overlap 4744581 CGCAATAGGTTTCCA GCGC CTC GCCC TTTTTCTTGGAGTCC TERM 3247 4745298 - 4745256 - R 71 -5.6 -4.27584 | gap 1, overlap 4745257 4745276 4745295 ATCGTCAATGCAAAA CCCGTTCCGATTGCGGCAA ATCCGG CTGCGGCAACCG-AACGGC ACTCGTCTGTCGAAC clpS 4745774 - 4745442 - | ATP-dependent Clp protease adaptor protein ClpS, modulator of ClpA substrate specificity TERM 3248 4746477 - 4746494 + r 81 -14.1 -3.63805 | opp_overlap 4746477 CGAGACAACAAAAAA GCCCGGC GCGA GCCGGGC TTTCGACTGTCACCT TERM 3249 4746494 - 4746477 - R 100 -14.1 -5.60689 | opp_overlap 4746477 CGAGACAACAAAAAA GCCCGGC GCGA GCCGGGC TTTCGACTGTCACCT BRADO4548 4746865 - 4746524 - | hypothetical protein TERM 3250 4747647 - 4747619 - g 70 -11.8 -3.36273 | gap 1 CTCCGGCAAGATGAA GCT-CGACACCGA GATG CCGGTGTCGGAGC ACGCCTCCGAGCAGT BRADO4549 4747308 - 4749068 + | putative D-alanyl-D-alanine carboxypeptidase (peptidase S11)(DD-carboxypeptidase) TERM 3251 4749092 - 4749116 + T 100 -20 -5.30616 | opp_overlap 4749107 CATCGCCGCATGTGA GGCCCGCGCG ACACA CGCGCGGGCC TTTTTCTTTGCCTGC BRADO4550 4750017 - 4749301 - | hypothetical protein BRADO4551 4750852 - 4750106 - | hypothetical protein BRADO4552 4751863 - 4750976 - | putative alpha/beta-hydrolases BRADO4553 4753276 - 4752353 - | putative ATPase involved in chromosome partitioning TERM 3252 4752409 - 4752454 + g 72 -11.8 -3.59979 | CCTGGGCGAACCATT CGGCGCGGTTGGCG-GCGCGGC GTCG GCCGCGCTCGTCGAGCG-GCAG TTTGAGCTGGCGCAG TERM 3253 4753043 - 4753088 + g 77 -10.9 -3.78778 | gap 1, overlap 4753052 4753056 GATGCAGTAGTGAGT CGGCAGCTCCAGGCGCAGGCCG GTG CGGCGCGC-CCAGGCGCTGCGG TTGTTGATGTAGTGC TERM 3254 4753417 - 4753399 - H 80 -14.6 -3.18264 | GCGCGCATTTACCAA CTCCGCAC GAT GTGCGGAG ACGTGCTAACAGGCG panC 4753539 - 4754390 + | pantothenate synthetase (pantoate--beta-alanine ligase) BRADO4555 4754971 - 4754531 - | hypothetical protein TERM 3255 4755003 - 4755050 + r 73 -12.7 -3.16068 | gap 3, overlap 4755009 4755031 GGTGCTATTCGTCCT TGGCGGCCG-GCT-C-GGCGGCGT CAG GCGCGGCCTGCGGCGCGGCCGCCG GTTTTGGCTTCGGCG TERM 3256 4755009 - 4755051 + r 91 -11.9 -4.27316 | overlap 4755003 4755031 ATTCGTCCTTGGCGG CCGGC-TCGGCGGCGTCAGGC GCG GCCTG-CGGCGCGGCCGCCGG TTTTGGCTTCGGCGC BRADO4556 4755981 - 4754992 - | hypothetical protein TERM 3257 4756243 - 4756273 + r 83 -14.7 -3.53012 | gap 1, overlap 4756246 GCCGCCCTCCTCGAT CGAGCCGGCGCGTC CGCC GACGCGCCGGG-CG TTTCGGCGGGCGCGA TERM 3258 4756246 - 4756272 + r 78 -15.9 -2.71712 | gap 1, overlap 4756243 GCCCTCCTCGATCGA GC-CGGCGCGTC CGCC GACGCGCCGGGC GTTTCGGCGGGCGCG BRADO4557 4756484 - 4756293 - | hypothetical protein TERM 3259 4756328 - 4756348 + g 89 -11.1 -4.2717 | TCTCTCTGGCGACCC GCTCGAACG CTT CGGTCGAGC TTTTGATCCGGTACT BRADO4558 4757048 - 4756686 - | hypothetical protein TERM 3260 4757129 - 4757088 - R 100 -22.2 -2.62184 | overlap 4757115 CCCCGGCGCAGAGGA GCGCGCCGGCCCCGCCGC GTCAAG GCAGCGGCGCCGGCGCTC GCGTCAAACCCGCTC BRADO4559 4757792 - 4757133 - | putative glutathione S-transferase (GST) BRADO4560 4758824 - 4757958 - | hypothetical protein BRADO4561 4759772 - 4758954 - | putative aldo/keto reductase; putative 2, 5-diketo-D-gluconate reductase B (DkgB-like) BRADO4562 4760137 - 4759847 - | XRE family transcriptional regulator BRADO4563 4761638 - 4760220 - | putative magnesium transporter MgtE-like (divalent cation transporter Mg2+/Ni2+/Co2+) TERM 3261 4760306 - 4760269 - G 83 -9.1 -4.43714 | overlap 4760265 4760270 4760298 AGAAACGAGAAGAAA CCGACCACGTCGGTCAC CGTG GTGACGAACGTGCCCGA GGCGACGGCCGGATC TERM 3262 4762235 - 4762197 - g 75 -13.2 -3.40403 | gap 1, opp_overlap 4762197 4762206, overlap 4762220 TGCCGCTGACGAGAA GGCGCTCAACGGCGTCG AGACGA CGACGCCGTCCA-CGCC GTTCTTCCGGTTCCC BRADO4564 4761769 - 4762584 + | putative polysaccharide deacetylase; putative chitin deacetylase BRADO4566 4762946 - 4764019 + | putative polysaccharide deacetylase TERM 3263 4764068 - 4764051 - T 100 -14.1 -4.8048 | opp_overlap 4764051 TCGTGACACGAAAAA GGGGCGC CGCT GCGCCCC TTTTTCGACAGATCC TERM 3264 4764051 - 4764068 + T 100 -14.1 -4.57569 | opp_overlap 4764051 TCGTGACACGAAAAA GGGGCGC CGCT GCGCCCC TTTTTCGACAGATCC BRADO4567 4764507 - 4764133 - | hypothetical protein TERM 3265 4764732 - 4764690 - R 71 -8.6 -3.90744 | gap 2, overlap 4764687 CGCCGTGGTAAACAA TCAGCTGCGC-C-GGCTG TCCAAGTTT CAGCCTGCACGCAGCTGA AGCGATCTTCACGTC BRADO4568 4766004 - 4764766 - | putative D-amino-acid dehydrogenase (DadA-like) BRADO4569 4766370 - 4766020 - | putative translation initiation inhibitor-like protein BRADO4570 4767904 - 4766408 - | putative amidase BRADO4571 4768113 - 4768778 + | transcriptional regulator TERM 3266 4769052 - 4769035 - g 75 -9.1 -4.05446 | gap 1, opp_overlap 4768999, overlap 4769013 CTCCTGAAGGACAAA GCCGGCCG TAT CGG-CGGC CGCGTAAGTTCTGCG BRADO4572 4768996 - 4769220 + | hypothetical protein TERM 3267 4769743 - 4769768 + G 71 -9.7 -3.79419 | gap 1, overlap 4769741 CTACGACCCGCTTTT GCAGCTCGTCCC CGC GGCACGAGC-GC TCTTTTATAGGCGAC BRADO4573 4769222 - 4769803 + | hypothetical protein BRADO4574 4770807 - 4769791 - | putative nucleoside-diphosphate-sugar epimerases TERM 3268 4771186 - 4771159 - g 77 -5.5 -4.62069 | gap 1 TCCGGACCGCAAAAA CCG-GCGGCGAT GCGCA ACAGCCGCGCGG CGTGGTCAGGATCTC BRADO4575 4770897 - 4771802 + | LysR family transcriptional regulator TERM 3269 4771810 - 4771829 + T 78 -10.6 -4.00042 | GCCGGTGACGGCGGA GACGCGCC GCGT GGCGCGCC TTGTTTCGTCCGCGC BRADO4576 4772230 - 4771886 - | hypothetical protein eutB 4772488 - 4773873 + | ethanolamine ammonia-lyase heavy chain (ethanolamine ammonia-lyase large subunit) eutC 4773870 - 4774658 + | ethanolamine ammonia-lyase light chain (ethanolamine ammonia-lyase small subunit) BRADO4579 4775377 - 4774673 - | putative branched-chain amino acid ABC transporter, ATP-binding protein (livF-like) BRADO4580 4776140 - 4775385 - | putative branched-chain amino acid ABC transporter, ATP-binding protein TERM 3270 4776106 - 4776090 - G 74 -15.1 -3.06796 | opp_overlap 4776087 TTCGAGCGCAGTGAA GCCGCCG AAG CGGCGGC CGATGCCTTCGGCCT BRADO4581 4777138 - 4776137 - | putative branched-chain amino acid ABC transporter, permease protein BRADO4582 4778010 - 4777138 - | putative branched-chain amino acid ABC transporter, permease protein TERM 3271 4777639 - 4777600 - G 79 -10.6 -3.91716 | gap 1 GTATTTCGGAAAGAA GCCGACGCCG-AGATCGAC CAC GCCGATCAGCTGCGGCGGC GTCGGAAACGGAATG BRADO4583 4779271 - 4778021 - | putative branched-chain amino acid ABC transporter, periplasmic-binding protein BRADO4584 4781672 - 4779297 - | putative carbon-monoxide dehydrogenase large subunit, coxL-like protein TERM 3272 4781553 - 4781532 - G 74 -5.1 -4.56597 | gap 1, overlap 4781533 4781534 4781543 4781546 TGGGCTGCGCAAAAA GGC-CGCATG AAG CATGCGCGGC AGGCGGAGATCGGTG BRADO4585 4782187 - 4781669 - | putative carbon-monoxide dehydrogenase small subunit, coxS-like protein TERM 3273 4781883 - 4781861 - G 73 -13.4 -3.28712 | GCCCGGCGTGCAGAA GCCGCATTGC AGG GCATTGCGGC GATGAAACTCCGCTT BRADO4586 4783056 - 4782196 - | putative carbon monoxide dehydrogenase medium subunit, coxM-like protein BRADO4587 4783312 - 4783950 + | TetR family transcriptional regulator TERM 3274 4784023 - 4783993 - f 100 -16.9 -4.72272 | gap 1 GGTCGCGAGCAAAAA CGGG-CGGCCGCAC GAGC ATGCGGCCGACCCG ACGAGAGCCAAGGGC BRADO4588 4784504 - 4784788 + | hypothetical protein BRADO4589 4785348 - 4785118 - | hypothetical protein BRADO4590 4785376 - 4788036 + | putative ATPase TERM 3275 4788130 - 4788146 + T 90 -2.3 -5.45726 | ACTGCCTTCGAGGGA CGAAA CAAATGC TTTCG TTTTTTTCGAATATG TERM 3276 4788924 - 4788909 - T 72 -11.8 -3.31144 | CCCTCATGGTGAGAA GCGCCG CTTG CGGCGC GTCTCGAAACATGAG fixG 4790416 - 4788974 - | nitrogen fixation protein FixG TERM 3277 4790235 - 4790205 - G 80 -9.6 -4.16767 | opp_overlap 4790206, overlap 4790206 AAGAAGAAGTAGAAA CGGCGGTGCGGG AAATCGA CCAGCACCGCCT GGTTCGGCATTCCCG TERM 3278 4790234 - 4790206 - G 72 -13.1 -3.08434 | opp_overlap 4790206, overlap 4790205 AGAAGAAGTAGAAAC GGCGGTGCGGG AAATCGA CCAGCACCGCC TGGTTCGGCATTCCC BRADO4593 4790663 - 4790460 - | hypothetical protein BRADO4594 4790866 - 4791861 + | RND family efflux pump membrane fusion protein BRADO4595 4791858 - 4795082 + | AcrB/AcrD/AcrF family cation mulitdrug efflux protein BRADO4596 4795092 - 4795445 + | putative carboxymuconolactone decarboxylase BRADO4598 4795577 - 4795747 + | acetylornithine deacetylase(fragment) BRADO4599 4796084 - 4795701 - | putative dipeptide ABC transporter, ATP-binding protein dppD (fragment) BRADO4600 4796353 - 4796081 - | putative ABC transporter, permease protein (fragment) BRADO4601 4796715 - 4796338 - | putative dipeptide ABC transporter, permease protein (fragment) BRADO4602 4796910 - 4796752 - | putative dipeptide ABC transporter, permease protein (fragment) BRADO4603 4797082 - 4796903 - | putative dipeptide ABC transporter, permease protein (fragment) BRADO4604 4797482 - 4796907 - | putative ABC transporter, permease protein (fragment) BRADO4606 4798006 - 4797287 - | putative dipeptide ABC transporter (fragment), periplasmic binding protein BRADO4608 4798135 - 4798599 + | putative transcriptional regulator (fragment) dhaK 4799601 - 4798612 - | PTS-dependent dihydroxyacetone kinase, dihydroxyacetone binding subunit dhaK TERM 3279 4799114 - 4799135 + g 70 -10.1 -3.63744 | overlap 4799103 TCGAGATCGCGGCCC TGCTCGGCG GCGG CGCCGAGAA TCTTTTCGACGACGA BRADO4610 4800050 - 4799598 - | hypothetical protein ptsI 4801654 - 4800047 - | phosphotransferase system enzyme I (phosphoenolpyruvate-protein phosphotransferase) (major TERM 3280 4800284 - 4800320 + g 78 -15.7 -3.09327 | CACGTCGGCATAGTC GGCCACCTCGGCGCCGT CGC GCGACGCCGCGGTGGCG TATTGGGTCAGGTCA TERM 3281 4801528 - 4801487 - G 84 -17.4 -3.14344 | opp_overlap 4801497 GAGGCTCGCGATCAA CTCGGCCACCGC-GTCACGC GCGC GCGCGACCGCGGCGGC-GAG CGCGGCATGCTCCTC ptsH 4801972 - 4801655 - | sugar transport PTS system phosphocarrier protein HPr (histidine-containing protein) (protein H) BRADO4613 4802367 - 4801969 - | putative dihydroxyacetone kinase phosphotransfer protein (DhaH/M-like) dhaL 4802976 - 4802371 - | PTS-dependent dihydroxyacetone kinase, ADP-binding subunit DhaL (Glycerone kinase) (DHA kinase) BRADO4615 4803990 - 4802980 - | sugar ABC transporter ATP-binding/substrate binding protein ugpC 4805092 - 4803983 - | sugar ABC transporter ATP-binding/substrate binding protein BRADO4617 4805315 - 4805097 - | hypothetical protein BRADO4618 4806265 - 4805312 - | putative sugar ABC transporter, permease protein BRADO4619 4807224 - 4806262 - | putative sugar ABC transporter, permease protein BRADO4620 4808677 - 4807346 - | putative sugar ABC transporter, periplasmic substrate-binding protein TERM 3282 4809658 - 4809603 - R 100 -22.6 -3.86346 | gap 1 TCAGCCCGCGACAAA CTGGCACGACGGGCAATCGGCGCATGG CGG CCTTGCGCGGATGGCCCGTCGGGC-AG ATCGGAGCCGAGATC BRADO4621 4810706 - 4809744 - | hypothetical protein TERM 3283 4811063 - 4811043 - R 100 -16.9 -4.56597 | opp_overlap 4811045 GTCGTTCGTCAAAAA GACGCGCAG GAT CTGCGCGTC TCATCAGCAGGCCAA TERM 3284 4811045 - 4811061 + r 72 -13.7 -2.78384 | opp_overlap 4811043 CGTTCGTCAAAAAGA CGCGCAG GAT CTGCGCG TCTCATCAGCAGGCC BRADO4622 4814226 - 4811083 - | AcrB/AcrD/AcrF family mulitdrug efflux protein TERM 3285 4811636 - 4811596 - G 85 -16.2 -3.40907 | gap 1, opp_overlap 4811592 4811624 GCACAGGAAGACGAA CAGGATCGACAGGCCGAGC AGGA ACGCGGCCTG-CGATCCCG CGAGCTTCTCCTGCA BRADO4623 4815437 - 4814256 - | AcrB/AcrD/AcrF family mulitdrug efflux protein BRADO4624 4815809 - 4815997 + | 3-oxoacyl-(Acyl carrier protein) synthase III (fragment) BRADO4625 4816133 - 4817140 + | putative alpha/beta-hydrolases superfamily protein TERM 3286 4817444 - 4817394 - g 100 -19.7 -3.27774 | GACGGCAACCAGGAA CGGCTGCGCTGCC-GCGCCGCCTAC GAC GTGGGCGGCGCCGGC-GAGCAGCTG CGCCTGAACATCCGC BRADO4626 4817241 - 4817726 + | hypothetical protein oxa5 4818781 - 4817963 - | Beta-lactamase (OXA-5), class D BRADO4629 4820795 - 4819149 - | hypothetical protein TERM 3287 4819436 - 4819395 - G 73 -12.8 -3.35996 | opp_overlap 4819424, overlap 4819396 GACGTCGAGCGAGAA GCGCGCGCGCCAGACGCG CTTGGC CGCGTCGGGCGCCTGCGT GCCGCCGTCGCGCGT TERM 3288 4819435 - 4819396 - G 77 -16.3 -2.61383 | opp_overlap 4819424, overlap 4819395 ACGTCGAGCGAGAAG CGCGCGCGCCAGACGCG CTTGGC CGCGTCGGGCGCCTGCG TGCCGCCGTCGCGCG BRADO4630 4821640 - 4820858 - | putative chaperone protein BRADO4631 4821730 - 4822170 + | hypothetical protein BRADO4632 4823644 - 4822268 - | putative ribosomal large subunit pseudouridine synthase RluC-like (23S RNA pseudouridylate synthase) (RNA-uridine isomerase) BRADO4633 4823707 - 4824693 + | putative esterase/lipase rarA 4826175 - 4824841 - | recombination factor protein RarA TERM 3289 4825372 - 4825347 - G 82 -16.9 -2.86164 | gap 1, opp_overlap 4825343 4825361 GGGCGAAGTAGTACA GCGCGGCATCGG GAT CCGA-GCCGCGC ACCGATTTGTGCATC TERM 3290 4825849 - 4825818 - G 70 -10.1 -3.71284 | CGTCGACGAAGAGAA GCGTGCCCTGCC-CG GTCT CGCGGC-GGGCGCGC GCCGCATCAAACACC BRADO4635 4827566 - 4826172 - | serine protease BRADO4636 4828004 - 4827627 - | MarR family transcriptional regulator BRADO4637 4828120 - 4829136 + | putative oxidoreductase; putative quinone oxidoreductase BRADO4638 4829364 - 4830554 + | putative Beta-lactamase BRADO4639 4831036 - 4830575 - | hypothetical protein TERM 3291 4830914 - 4830860 - G 74 -12.8 -3.53012 | gap 3 CTTGTGGCGGGCAAA GGCGGCCACGCC-GGCGC-GGGCGACC AGCA GGCCGCACAGCGCGAGGC-TGGCAGCC AAGATCCAGCGCCAG TERM 3292 4831119 - 4831081 - R 75 -11.6 -3.62096 | CGGGAGGAGTTGAAA CGAGCGGCGCCAGCCG TACCGCG CGGATGGCGCGGATCG CCAGCACGTGCAGCG BRADO4640 4831765 - 4831058 - | hypothetical protein BRADO4641 4832963 - 4831779 - | major facilitator superfamily permease BRADO4642 4834073 - 4832997 - | putative transcriptional regulator (NmrA-like) BRADO4643 4834772 - 4834143 - | permease BRADO4644 4835282 - 4834851 - | MarR family transcriptional regulator BRADO4645 4836153 - 4835431 - | hypothetical protein BRADO4646 4836344 - 4836733 + | putative glutathione-dependent formaldehyde-activating (GFA) BRADO4647 4836790 - 4837470 + | hypothetical protein BRADO4648 4837530 - 4837934 + | hypothetical protein BRADO4649 4838759 - 4837968 - | putative TonB-related protein exbD 4839239 - 4838775 - | biopolymer transport protein ExbD; uptake of enterobactin, tonB-dependent uptake of B colicins exbB 4840154 - 4839246 - | biopolymer transport protein ExbB; uptake of enterobactin, tonB-dependent uptake of B colicins TERM 3293 4839686 - 4839712 + g 74 -14.5 -3.03243 | gap 1, opp_overlap 4839704 GCCGCGCCTCCGTGA TCGCCGCC-TGC AGAA GCACGGCGGCGA TGTTGCCGGATCGGT ybiX 4840873 - 4840184 - | putative hydroxylase TERM 3294 4840369 - 4840353 - G 89 -2.9 -5.28176 | TGCATCCAGAAAAAA GAGGC GACCCGG GCCCC GCGCGTGACCGGCGT TERM 3295 4840717 - 4840667 - G 71 -12.5 -3.25823 | gap 1 CGCCGCCGAGAGGAA GCGCGGATTCTTGGTCAGCGCCGT GATG ACA-CGCTGGCCCAGCAGCCGCGC CGCCTCGCCGTCCGG BRADO4653 4843323 - 4840876 - | putative outer membrane TonB-dependent receptor; putative receptor for iron transport TERM 3296 4843480 - 4843501 + r 82 -14.5 -3.28712 | opp_overlap 4843464 4843480 TGAAATCGTTCTAAA CAGCGCGAT TTCC ATCGCGCTG TTGTCGGGAGGCCGC TERM 3297 4843501 - 4843480 - R 85 -14.5 -3.56594 | opp_overlap 4843480, overlap 4843464 TGAAATCGTTCTAAA CAGCGCGAT TTCC ATCGCGCTG TTGTCGGGAGGCCGC BRADO4654 4843782 - 4843522 - | hypothetical protein BRADO4655 4844665 - 4844204 - | MarR family transcriptional regulator TERM 3298 4844463 - 4844436 - G 81 -11.3 -4.15044 | overlap 4844437 CGCCGCTCCAACAAA CCCTGCTCGAC GAGCCG GTCGAGCAGGC GCACCAGCGAGATCG TERM 3299 4844462 - 4844437 - G 76 -14.8 -3.08812 | overlap 4844436 GCCGCTCCAACAAAC CCTGCTCGAC GAGCCG GTCGAGCAGG CGCACCAGCGAGATC BRADO4656 4844824 - 4846005 + | putative component of multidrug efflux pump, mdtA-like BRADO4657 4846002 - 4849148 + | putative component of multidrug efflux pump, mdtB-like TERM 3300 4849134 - 4849159 + F 72 -14 -2.73483 | opp_overlap 4849133 4849136 4849149, overlap 4849137 ACCGGCTCAGTCAAG GAGGCGGCGG AGTAAG CCGCCGCTTC TCGTTGCGGTCGACT TERM 3301 4849137 - 4849156 + F 74 -12.1 -3.51825 | opp_overlap 4849136 4849133 4849149, overlap 4849134 GGCTCAGTCAAGGAG GCGGCGG AGTAAG CCGCCGC TTCTCGTTGCGGTCG BRADO4659 4849855 - 4852083 + | O-linked N-acetylglucosamine transferase BRADO4661 4853893 - 4852685 - | hypothetical protein BRADO4663 4853906 - 4854349 + | hypothetical protein BRADO4664 4854606 - 4855088 + | putative NUDIX hydrolase TERM 3302 4855110 - 4855144 + T 75 -14.9 -2.78384 | gap 1 AATCCGCTAGAGCCG CCCGCCGGCCAGCGCG GCGG CGCGC-GGCCGGCCGA TGTCGTCCAGCGCGC hpcB 4856018 - 4855101 - | 3,4-dihydroxyphenylacetate 2,3-dioxygenase TERM 3303 4856127 - 4856110 - R 100 -14.1 -5.42259 | CGACGGCGAAAAAAA GGGCCGC GACA GCGGCCC TTCCCGGCAGCAACG BRADO4666 4856716 - 4856195 - | putative HspC2 heat shock protein TERM 3304 4858503 - 4858454 - g 73 -12.1 -3.36569 | gap 1, opp_overlap 4858446 4858452, overlap 4858443 4858452 GGAAGGCCGCAAATA TGGCGTCTATCTCGGCCTGGTGAC CCA GCGACC-GGCCGAGCTGGACTCCA CCATCATTTCCCAGT BRADO4667 4857282 - 4858961 + | hypothetical protein BRADO4668 4859090 - 4859575 + | MarR family transcriptional regulator TERM 3305 4859602 - 4859619 + G 78 -10.5 -4.07687 | ACATCATTCCCGTTA CGCGGGG CAGA CCTCGCG TTTTCGGCCAAGACT TERM 3306 4861226 - 4861184 - g 71 -12.7 -3.29263 | gap 2, opp_overlap 4861190 AGACCTTGGCGACAA CCGCCGA--GCGCCGCGGCCA TCA TGACCGCGCCGCCTTCGTCGG CCTGATGCTCGACCG TERM 3307 4861570 - 4861604 + G 82 -17 -3.0263 | CGCACCGGGCTATTC CCGGACGCGCCGGCCT ATC ACGCCGACGCGACCGG TCTTCGGAGCCTCGT BRADO4669 4859575 - 4861626 + | putative efflux transporter permease; putative fusaric acid resistance pump BRADO4670 4861623 - 4861832 + | hypothetical protein ydhJ 4861829 - 4862695 + | multidrug resistance membrane protein BRADO4672 4862767 - 4863351 + | putative peroxidase related protein BRADO4673 4863979 - 4863356 - | hypothetical protein BRADO4674 4864179 - 4864541 + | hypothetical protein acpXL 4864746 - 4865027 + | acyl carrier protein BRADO4676 4865037 - 4865507 + | putative 3-hydroxymyristoyl-acyl carrier protein dehydratase FabZ-like BRADO4677 4865504 - 4866709 + | 3-oxoacyl-(acyl carrier protein) synthase II TERM 3308 4867761 - 4867724 - g 78 -15.5 -3.16961 | opp_overlap 4867727 4867756, overlap 4867722 4867717 4867715 4867756 CGACAAGATGGAATA TGTCGGCGTGTCCGCCG TGTT CGGCGAGCACACCGGCA AGATCCCGGTCTCGT fabF 4866747 - 4868021 + | 3-oxoacyl-(acyl carrier protein) synthase II BRADO4679 4868038 - 4868970 + | lipid A biosynthesis lauroyl acyltransferase BRADO4680 4869132 - 4869509 + | putative glyoxalase/dioxygenase potF 4870702 - 4869602 - | putrescine ABC transporter, periplasmic binding protein TERM 3309 4870474 - 4870452 - G 70 -9.8 -3.72576 | overlap 4870454 TGGCGCTGGAGGAAA TACGCCGTGG GCA CCACGACGTC GTAGCCGGACTTGCC TERM 3310 4870472 - 4870454 - G 73 -12.4 -3.44848 | overlap 4870452 GCGCTGGAGGAAATA CGCCGTGG GCA CCACGACG TCGTAGCCGGACTTG BRADO4682 4871878 - 4870715 - | hypothetical protein TERM 3311 4871143 - 4871131 - G 75 -9.1 -4.11216 | CGGCGACGCGCAAAA GCTGC GGC GCAGC GCAGACGAAGCCGAT BRADO4683 4872211 - 4871888 - | putative rhodanese family protein kup 4874238 - 4872316 - | Kup family low affinity potassium transporter TERM 3312 4872920 - 4872892 - G 71 -12.3 -3.22223 | CAAGGTCATCACGAA GCCGCCGAGCGCC AGC GGCACCCAGCCGC CTTCCAGCACCTTCA TERM 3313 4872994 - 4872976 - G 75 -13.1 -3.39449 | GTCCAGGAACAGGAA CGGCGCG ATCAG CGCGCCG GCTGCGATCGGCGAC kup 4876292 - 4874394 - | Kup family low affinity potassium transporter BRADO4686 4877379 - 4876549 - | putative chemotaxis protein MotB TERM 3314 4876813 - 4876846 + g 74 -8 -4.18018 | gap 1, opp_overlap 4876785 GCCGGTGATCTGCAC GCGCAGCGGCGTCGC CTTGA GCGGCGCGGC-GAGC TTTTCGATCAGGCGC TERM 3315 4877353 - 4877364 + g 95 -7.2 -5.45652 | GTGCCCGCCGCCATG CGCG TCGC CGCG TTTTTTCTTGGCCAT BRADO4687 4878183 - 4877410 - | putative chemotaxis protein MotA (flagellar motor component) TERM 3316 4878383 - 4878325 - R 76 -9.4 -4.09556 | gap 2, opp_overlap 4878326, overlap 4878334 4878338 GAGAGGTAAACGAAA TGCAGCGAACAGATGCGGGCCGAGCGCG ACAGG CGCGCTCAGGCCGCCGCCG--CGCCGCT CTTGAGCAGATTGGC TERM 3317 4878376 - 4878334 - R 80 -14.7 -3.11999 | opp_overlap 4878326, overlap 4878325 4878338 ACGAAATGCAGCGAA CAGATGCGGGCCGAGCGCG ACAGG CGCGCTCAGGCCGCCGCCG CGCCGCTCTTGAGCA TERM 3318 4878372 - 4878338 - R 78 -14.9 -3.11088 | opp_overlap 4878326, overlap 4878334 4878325 AATGCAGCGAACAGA TGCGGGCCGAGCGCG ACAGG CGCGCTCAGGCCGCC GCCGCGCCGCTCTTG BRADO4688 4878725 - 4878363 - | two-component system sensor BRADO4689 4880917 - 4878722 - | sensor histidine kinase TERM 3319 4880469 - 4880444 - G 76 -8.3 -4.23674 | gap 1, opp_overlap 4880423 GCTGATGAAGAGAAA GTCGTCCTTGCC GTC GGCATGGAC-AC GGAAGTGCTCGCGGT BRADO4690 4881897 - 4881178 - | hypothetical protein pssA 4882895 - 4882005 - | phosphatidylserine synthase (CDP-diacylglycerol--serine O-phosphatidyltransferase) psd 4883679 - 4882981 - | phosphatidylserine decarboxylase BRADO4693 4885790 - 4883814 - | multidrug ABC transporter ATPase/permease TERM 3320 4886117 - 4886093 - g 81 -10.7 -4.11484 | overlap 4886083 4886094 TCGAATCGGCGAAAA CCCTCGGCAAG GCG CTCGCCGAGAA CGGCGTCAGGCTCGT BRADO4694 4886014 - 4886616 + | hypothetical protein BRADO4695 4886997 - 4886620 - | putative glyoxalase/dioxygenase BRADO4696 4888712 - 4887114 - | alpha-isopropylmalate/homocitrate synthase family transferase TERM 3321 4887452 - 4887468 + g 75 -13.7 -3.31792 | CCAGCGCCACCGTGA CGCGCTC GCC GAGCGCG TTGTAGCGCTGCTCG TERM 3322 4888338 - 4888356 + g 70 -8.8 -4.0162 | GACGCTGTCTCTGAT CGAGGCGA GGT TCTCCTCG TTTGTGGTCTCGAGC BRADO4697 4889209 - 4888709 - | putative acetyltransferase BRADO4698 4889328 - 4889215 - | hypothetical protein cysS 4890734 - 4889325 - | cysteine tRNA synthetase (cysteine--tRNA ligase) TERM 3323 4890485 - 4890501 + g 80 -15.1 -3.43203 | GCAGGCCGGGATAGT CGCGCGC GGC GCGCGCG TTGATCTTGTCGTCC TERM 3324 4891395 - 4891375 - g 77 -13.3 -3.54935 | opp_overlap 4891371 GAAAGCCGGTGCAAA CTGCAGCCA TAG CGGCTGCAG CGAGTATGTCGCGAT BRADO4700 4891118 - 4891426 + | hypothetical protein TERM 3325 4892683 - 4892626 - g 70 -11 -3.61715 | overlap 4892679 CACCGCGGCCAAGAA GGGCGCCGCGCCGGCAGAGGCGGCCG CACCGC CGACCACGACCGCCGACACCACGACC GGCGCCGGTGCCGAC BRADO4701 4891580 - 4892743 + | hypothetical protein BRADO4702 4894095 - 4892767 - | putative glutamine-dependent NAD(+) synthetase (NadE-like) BRADO4703 4894461 - 4894108 - | putative diacylglycerol kinase (DgkA-like) aroF 4895849 - 4894461 - | 3-deoxy-7-phosphoheptulonate synthase BRADO4705 4897558 - 4896830 - | putative permease TERM 3326 4897498 - 4897484 - G 79 -11.4 -3.80625 | CGCGGAGAACGCAAA TCCGGC AAG GCCGGA GACGAAGGCGCCGAA TERM 3327 4897529 - 4897519 - G 70 -2.4 -4.63486 | overlap 4897505 4897506 AGGCGCCGAAGAAAA CGGC GGC GCTG AGCAACAGAAATGAG BRADO4706 4897719 - 4897600 - | hypothetical protein BRADO4707 4898010 - 4898333 + | ArsR family transcriptional regulator BRADO4708 4898330 - 4898737 + | hypothetical protein BRADO4709 4898920 - 4899141 + | hypothetical protein TERM 3328 4899214 - 4899238 + T 100 -18.5 -3.53811 | ATCGACGGTGGGCAC GCTGCCGCCGC GCT GCGGCGGCCGC TTTGCCCACCCTACG BRADO4710 4899691 - 4899290 - | putative cupin family protein TERM 3329 4899883 - 4899941 + r 74 -9 -3.91144 | gap 1, opp_overlap 4899896, overlap 4899886 GTCTCGGTCATTCGT -CATTCCGGAGACAGTGCACGAAACGA CCAAAT TAGTTTTGTGCACTGTCACCGAATTGC TTTGTGCACTGTCAC TERM 3330 4899886 - 4899937 + r 86 -15.3 -3.61244 | opp_overlap 4899896, overlap 4899883 TCGGTCATTCGTCAT TCCGGAGACAGTGCACGAAACGA CCAAAT TAGTTTTGTGCACTGTCACCGAA TTGCTTTGTGCACTG BRADO4711 4900444 - 4899974 - | hypothetical protein TERM 3331 4900462 - 4900450 - R 76 -7.7 -4.26076 | overlap 4900453 GTACGCTCACGAAAA GAAGC TCG GCTTC GGCAACAAGCCGGTC gor 4902004 - 4900619 - | glutathione reductase BRADO4713 4902569 - 4902039 - | hypothetical protein rpiA 4903311 - 4902619 - | ribose-5-phosphate isomerase A TERM 3332 4903474 - 4903444 - H 83 -6.6 -4.89393 | overlap 4903434 4903446 GAAATCGGACAAAAA GCCCGCGCCGGCCC CTT GCAGGGGCGCGAGC CTGCCGCTAGCCAAT cbbZ 4903494 - 4904180 + | phosphoglycolate phosphatase TERM 3333 4904640 - 4904656 + G 70 -10.8 -3.5764 | opp_overlap 4904620, overlap 4904635 TGCACCGTCTCGGTG CCGGCG CCCGA CGCCGG TTTCAGCGTGACCTT BRADO4717 4904535 - 4904954 + | hypothetical protein TERM 3334 4905073 - 4905047 - f 78 -15 -2.98823 | TTGCCTGGATAGACA TCCGGCCGCGCG CCT CGCGCGGCCGCC GCGTGGCATCGCTGC moaA 4905117 - 4906148 + | molybdenum cofactor biosynthesis protein A TERM 3335 4906792 - 4906766 - g 73 -15.9 -2.52519 | gap 1, opp_overlap 4906782, overlap 4906765 4906763 CGAGGAGATCAAGAT CCG-CGCCACCG GCCG CGGTGGCGGCGG CGCCCGTCACGTGAT BRADO4719 4906152 - 4906832 + | hypothetical protein TERM 3336 4908463 - 4908508 + G 70 -11.7 -3.41222 | gap 1, overlap 4908462 GATCTGGCTCGGCCT GCTCGCGGCCGAGATGGGCGTC GTC GGCGCCGTGCTCGGCAGC-AGC TATTTCGGCTTCAAC BRADO4720 4906973 - 4908814 + | hypothetical protein BRADO4721 4909761 - 4908811 - | hypothetical protein TERM 3337 4909881 - 4909927 + H 76 -13.1 -3.53224 | gap 2, opp_overlap 4909887, overlap 4909882 4909884 GTTGCTCAGCCGCGG AGAGGACCGCGTGGTGCTAGCGA TGT TCGCT--CACCGCGCCGTCCTCC TTTCGACAGCAACTG TERM 3338 4909882 - 4909926 + H 81 -16.6 -2.71791 | gap 2, opp_overlap 4909887, overlap 4909881 4909884 TTGCTCAGCCGCGGA GAGGACCGCGTGGTGCTAGCGA TGT TCGCT--CACCGCGCCGTCCTC CTTTCGACAGCAACT TERM 3339 4909884 - 4909924 + H 74 -13.4 -2.90496 | gap 2, opp_overlap 4909887, overlap 4909882 4909881 GCTCAGCCGCGGAGA GGACCGCGTGGTGCTAGCGA TGT TCGCT--CACCGCGCCGTCC TCCTTTCGACAGCAA BRADO4722 4909970 - 4910239 + | hypothetical protein TERM 3340 4910285 - 4910326 + F 84 -15.9 -3.33162 | opp_overlap 4910291 CTCGCTTGTCAGCGA GATGAAGGGTCGTGCTCAT GATC GTGAGCACGGCCCTTCCGC TTATGCGGTCCGATG TERM 3341 4910320 - 4910291 - f 77 -13.6 -3.2794 | opp_overlap 4910285 TGTCAGCGAGATGAA GGGTCGTGCTCA TGATCG TGAGCACGGCCC TTCCGCTTATGCGGT BRADO4723 4910444 - 4911334 + | putative cation efflux family protein, CzcD-like BRADO4724 4911586 - 4911350 - | hypothetical protein BRADO4726 4912132 - 4912671 + | putative TRAP C4-dicarboxylate transport system, DctQ subunit (small permease component) BRADO4727 4912668 - 4914269 + | putative TRAP C4-dicarboxylate transport system permease, DctM subunit (large permease component) TERM 3342 4914295 - 4914270 - T 84 -14 -3.8186 | gap 1 CAGCCGAAGCAATAA CGGCCGGCCGC TCTAG GCGG-CGGCCG AAGGTGCCGGAGCGG BRADO4728 4915619 - 4914282 - | putative two-component system histidine kinase (QseC-like) TERM 3343 4914800 - 4914851 + g 74 -10 -3.84825 | gap 1 GCTGGTGCACGATCC GGCTCATCCGCGCGATGTCGGCGAG CAG TTCGGCG-CGTCCCGCGGACTGGCC TTTGGTCTCGATCCG BRADO4729 4916296 - 4915622 - | putative two-component response regulator (QseB/CopT-like) BRADO4730 4916583 - 4917710 + | HlyD family heavy metal efflux pump TERM 3344 4918887 - 4918911 + G 70 -10 -3.63991 | CAGCGCGCTGATCGT CAGCGCCAAC ATTCC GTTCGCGCTG TTCTTCGCCATCATC TERM 3345 4920699 - 4920750 + G 78 -13.9 -3.55444 | gap 3, opp_overlap 4920698 4920701 CGGCATCCTCAACAT CACCTATTTCCGCGA-GCTGCGCGCC ACC GGCGTG-AGCGTCGCGGAAGC-GGTG TTTCGCGGCTCGGAG BRADO4731 4917763 - 4921014 + | putative cation efflux system protein; putative heavy metal efflux pump CzcA-like TERM 3346 4921385 - 4921369 - g 78 -13.7 -3.57462 | opp_overlap 4921367 4921376 4921379 CATCGCAGCCGCAAA CGCGCTG GCC CAGCGCG GGCTGTTCTATCCCC BRADO4732 4921025 - 4922596 + | putative outer membrane lipoprotein (NodT-like), RND efflux system TERM 3347 4922588 - 4922634 + T 77 -14.5 -2.87881 | opp_overlap 4922597 ACGGCGGACGCCGAC GC-GAGATGATCGGCCGGCACGC CGC GCGCGCCGCCC-ATCGTCTCAGC TCTGTGAGCGCCTTG BRADO4733 4923718 - 4922630 - | putative periplasmic mannitol-binding protein; putative Trap-T transport system, dctP subunit TERM 3348 4922699 - 4922732 + g 73 -3.7 -4.66833 | opp_overlap 4922690 GAACCAGGAATAGCC GGCGCCGGAATAG GCGGTCAG CGACTCCAGCGCC TTTTTGAAGTTGGGA TERM 3349 4923872 - 4923849 - R 100 -19.6 -4.75776 | opp_overlap 4923843 AACGCAATGCAAAAA GCCCGGCCTC TTGC GAGGCCGGGC TCCGGGTTATCCGCC BRADO4734 4924995 - 4923904 - | putative periplasmic mannitol-binding protein; putative Trap-T transport system, dctP subunit BRADO4735 4926340 - 4925168 - | MinD/MRP family ATPase TERM 3350 4926105 - 4926132 + g 77 -13.4 -3.54475 | gap 1 GTCACGCCGGGAATG GCGCGCACGGCCG CCT CGGCC-TGCGCCC TTGTATCCTCCCAGG BRADO4736 4926880 - 4926434 - | putative dioxygenase TERM 3351 4926905 - 4926917 + H 72 -4.1 -4.63932 | TCCCTGGCTGGTTCG TTGGT CTT ACCGA TTTTGTTGCCGGATG BRADO4737 4927144 - 4928013 + | putative oxidoreductase; putative 3-hydroxyisobutyrate dehydrogenase TERM 3352 4928040 - 4928071 + T 77 -15.8 -2.54371 | opp_overlap 4928042, overlap 4928027 CCGCCGAGATCGGAA AACGATGGCCGCCG CTTG CGGCGGCCATCGGG TCCATTCCGCTACTT TERM 3353 4928069 - 4928042 - T 100 -22.8 -4.16943 | opp_overlap 4928040 4928027 GCCGAGATCGGAAAA CGATGGCCGCCG CTTG CGGCGGCCATCG GGTCCATTCCGCTAC BRADO4738 4929730 - 4928081 - | phage-like protein TERM 3354 4928971 - 4928960 - G 74 -5.8 -4.56597 | overlap 4928961 GGTGCCGCGCAAAAA CTGC CCGC GCAG ATCAGGCACGTTGAA TERM 3355 4930763 - 4930777 + G 74 -10 -3.85698 | ATGGAGACCTTCAAT CTCGAC CGC GTCGAG TTTCTCAAGGGCCCC BRADO4739 4930199 - 4932577 + | putative TonB-dependent receptor (Outer membrane siderophore receptor) precursor TERM 3356 4933929 - 4933945 + G 85 -10.1 -4.22678 | CGCTCCTCATCGTCG GCCTGTG CAT CACGGGC TTTGTCTTCAGTGTC BRADO4740 4932584 - 4934026 + | hypothetical protein TERM 3357 4934381 - 4934431 + G 100 -21.8 -2.64616 | TCGCGACCGGCATGA TGCTGAGCGTCTGGCTGCACGCGG TCG CCGCGGGCGCCTGGACGCTCGGCG TGCTCTGCATCCACG BRADO4741 4934146 - 4935744 + | putative sensor histidine kinase, putative membrane protein BRADO4742 4935825 - 4935989 + | hypothetical protein BRADO4743 4936018 - 4936554 + | hypothetical protein TERM 3358 4937497 - 4937547 + G 77 -13.2 -3.55761 | gap 3, opp_overlap 4937494 CCACATCAGGAAGCG GCCGCGGC-GCTCGCGGCCCGCGGC ATCA GCATCGG-CCGCGCGCAGCCG-GGC TTTGCGACATGGCTA BRADO4744 4936612 - 4937637 + | putative histidinol-phosphate aminotransferase (HisC-like) dusA 4938662 - 4937643 - | tRNA-dihydrouridine synthase A BRADO4747 4939171 - 4938899 - | hypothetical protein BRADO4748 4939196 - 4940080 + | hypothetical protein BRADO4749 4941501 - 4940083 - | hypothetical protein BRADO4750 4942775 - 4941498 - | hypothetical protein TERM 3359 4941879 - 4941855 - G 70 -8.6 -3.98214 | gap 1, overlap 4941875 ACGACCGATGAGAAA CGTGGCG-TCG GTTG CGAACACCACG CCTCGCAGCACCCGA BRADO4751 4944438 - 4942810 - | hypothetical protein TERM 3360 4943704 - 4943692 - GH 95 -10.5 -4.56597 | opp_overlap 4943693 CTGTTGTCGGAAAAA GGCGG GCG CCGCC GCATTTCCGCTCAGA TERM 3361 4944902 - 4944920 + Gr 70 -8 -4.07246 | CTTCGTCAAGGCGTT CCGCTCGG TGT CCGGCCGG TTTCGTTTCGAATGG BRADO4752 4944429 - 4945349 + | glycosidase exoA 4946386 - 4945346 - | succinoglycan biosynthesis protein ExoA BRADO4754 4946474 - 4947319 + | hypothetical protein BRADO4755 4947310 - 4948983 + | hypothetical protein BRADO4756 4948980 - 4950239 + | glycosyltransferase BRADO4757 4950667 - 4951158 + | exopolysaccharide production protein exoY BRADO4758 4951482 - 4951805 + | hypothetical protein BRADO4759 4952636 - 4951842 - | SAM-dependent methyltransferase TERM 3362 4952256 - 4952227 - G 73 -10.7 -3.73072 | gap 1, opp_overlap 4952228 4952229 4952241, overlap 4952229 AACTGCGCGATGAAA TAGCCTCCGGGGCG CAG CGCCTCGAAGGC-A TTGTCAAGGAAGCGC TERM 3363 4952228 - 4952256 + g 71 -12.3 -3.28712 | opp_overlap 4952227 4952229, overlap 4952229 4952241 ACTGCGCGATGAAAT AGCCTCCGGGGCG CAG CGCCTCGAAGGCA TTGTCAAGGAAGCGC TERM 3364 4952255 - 4952229 - G 82 -15.8 -3.44848 | opp_overlap 4952228 4952229 4952241, overlap 4952227 CTGCGCGATGAAATA GCCTCCGGGGCG CAG CGCCTCGAAGGC ATTGTCAAGGAAGCG TERM 3365 4952229 - 4952255 + g 74 -15.8 -2.57132 | opp_overlap 4952229 4952227, overlap 4952228 4952241 CTGCGCGATGAAATA GCCTCCGGGGCG CAG CGCCTCGAAGGC ATTGTCAAGGAAGCG BRADO4760 4954079 - 4952832 - | putative amidohydrolase TERM 3366 4954139 - 4954166 + r 75 -14 -3.11072 | ACTTTGCGCCAGGAT GCCCCGCGCCGC GGGC GCGGCGCAAGGC TGTGTGTTGCATGCG BRADO4761 4956062 - 4954203 - | TRAP-type C4-dicarboxylate transporter small and large permease TERM 3367 4955151 - 4955103 - G 70 -10.7 -3.54424 | opp_overlap 4955120, overlap 4955108 CTTCATGTCGGGAAA CAGCACCGGCGCGACCGCGGCCA TGT CGGCCGTCTTGGCGCCGGAGATG CCGGACACCAGCAGG TERM 3368 4955612 - 4955662 + g 74 -12.6 -3.53091 | gap 4, opp_overlap 4955605 GCATGAGACCGATGC CGACCGGCAC-CGCGCCGGCCCGCAC GCT GT-CGGGCAGGC-CGAGCGCCGG-CG TTTCCGCGAACGCCT BRADO4762 4957081 - 4956059 - | putative TRAP-type C4-dicarboxylate transport system, periplasmic component (dctP-like) BRADO4763 4958166 - 4957153 - | putative transketolase, beta-subunit BRADO4764 4959014 - 4958166 - | putative transketolase, alpha subunit BRADO4765 4959779 - 4959030 - | putative short chain dehydrogenase/reductase BRADO4767 4959889 - 4960767 + | peroxide resistance protein PerR BRADO4768 4961412 - 4960786 - | putative [Acyl-carrier-protein] phosphodiesterase (ACP phosphodiesterase) BRADO4769 4963005 - 4961416 - | putative gluconolactonase TERM 3369 4962486 - 4962472 - G 72 -11.4 -3.53733 | overlap 4962470 GTCAGGCGAGAAACA CAGCCC GTT GGGCTG ATCGAACAGATGGCG BRADO4770 4963863 - 4963015 - | putative Zn-dependent hydrolases, including glyoxylases TERM 3370 4963921 - 4963931 + r 71 -8.2 -3.89524 | opp_overlap 4963920, overlap 4963894 TCCCAGCCGATAGAC CCGC CGC GCGG TTTCTCCCATCACCT BRADO4771 4964790 - 4963903 - | putative metal-dependent hydrolase BRADO4772 4965905 - 4964787 - | hypothetical protein TERM 3371 4965509 - 4965567 + g 75 -12.9 -3.44051 | gap 1, opp_overlap 4965496 4965494 4965493 CATTGCGGCCGGTCG CGACACCGAGGCGGCGCGCGACCAGAGC CTCG GCACGGGTCGC-CGCCATCCCGGACTCG TTCTGCTCCTGGGCA BRADO4773 4966783 - 4965902 - | ATPase BRADO4774 4967812 - 4966790 - | putative oxidoreductase subunit; putative aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs BRADO4775 4969385 - 4967814 - | putative oxidoreductase subunit; putative aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs TERM 3372 4968845 - 4968820 - G 75 -9.7 -4.07568 | gap 1, opp_overlap 4968820 TCGGCCTGGGCAAAA CCGCGC-TCGAC GTC GCCGAAGCGCAG CTTCTGATGGTCGTA BRADO4776 4969873 - 4969397 - | putative iron-sulfur-binding protein, subunit of an oxidoreductase like aldehyde oxidase or xanthine dehydrogenase BRADO4777 4970698 - 4969877 - | putative oxidoreductase subunit; putative carbon-monoxide dehydrogenase (acceptor), middle subunit CoxM/CutM homologs BRADO4778 4971158 - 4970715 - | hypothetical protein BRADO4779 4971600 - 4971163 - | hypothetical protein BRADO4780 4974498 - 4971607 - | hypothetical protein TERM 3373 4972744 - 4972801 + g 71 -14.3 -2.87051 | gap 3, overlap 4972744 CCGCTCGACCGCTTC GCGCCGCTT-GAGATCG-GCGGCCTCGA CGGCC TCG-GTCCGCGCGATCTCCAGGCTGCGC GTTTCCTGCTCGGAG TERM 3374 4974532 - 4974544 + r 74 -10.5 -3.73402 | TCTTGCCTGGCGCGC GGCGC TTG GCGCC TTTGCTGCCGGATCT BRADO4781 4975417 - 4974572 - | putative TIM-barrel signal transduction protein BRADO4782 4977642 - 4975423 - | hypothetical protein BRADO4783 4978417 - 4977635 - | putative ABC transporter, ATP-binding protein BRADO4784 4979462 - 4978410 - | putative ABC transporter, permease protein BRADO4785 4980510 - 4979500 - | putative ABC transporter, permease protein BRADO4786 4981740 - 4980919 - | AraC/XylS family transcriptional regulator TERM 3375 4981855 - 4981811 - R 86 -16.4 -3.25317 | gap 1, overlap 4981803 4981809 4981807 4981812 CCAGAAAGCAAGAGA CGC-GACGACGCGGCCAGAGC GAGC GCTCCAGCCGCGCCGACTGCA AAGCACAATCGGTCA TERM 3376 4981854 - 4981812 - R 86 -17.7 -2.54467 | gap 1, overlap 4981803 4981811 4981809 4981807 CAGAAAGCAAGAGAC GC-GACGACGCGGCCAGAGC GAGC GCTCCAGCCGCGCCGACTGC AAAGCACAATCGGTC BRADO4787 4983118 - 4981868 - | putative ABC transport system, periplasmic substrate-binding protein TERM 3377 4983096 - 4983079 - G 75 -6.9 -4.34402 | overlap 4983080 TGCCGGACAGCAAAA GCGCCGT GACC ACGGCGA ACCCCACGCGTCGCA BRADO4788 4983607 - 4984797 + | putative sugar ABC transporter, substrate binding protein; putative ribose ABC transporter TERM 3378 4984814 - 4984848 + F 100 -25.8 -3.12668 | opp_overlap 4984798 CTCGCGCCGCTCTCA GCCGCCGCGCAATCTC GAG GTGATTGCGCGGCGGC TTCGATGTGACCGTC TERM 3379 4985781 - 4985800 + G 75 -9.2 -4.12902 | CGACGGCCAGGGCCA GCGCGAGC TGCT GCTGGCGC TTTTCGGCGTGCTTC BRADO4789 4984888 - 4986429 + | putative sugar ABC transporter, ATP-binding protein; putative ribose ABC transporter rbsA-like BRADO4790 4986426 - 4987406 + | putative sugar ABC transporter, permease protein; putative ribose ABC transporter rbsC-like TERM 3380 4987711 - 4987664 - g 72 -14.8 -2.78384 | gap 1 TGGGTCGTTACGACA GGCG-CGATGATGGCCTGCGCCG CCG CGGCGCATGGCACGACCGGCGCC ATCCTCGCGATCCCC BRADO4791 4987403 - 4988383 + | putative sugar ABC transporter, permease protein; putative ribose ABC transporter rbsC-like glpD 4989928 - 4988420 - | glycerol-3-phosphate dehydrogenase fucA 4990713 - 4989925 - | L-fuculose-1-phosphate aldolase BRADO4794 4991769 - 4990729 - | putative D-3-phosphoglycerate dehydrogenase BRADO4795 4993342 - 4991762 - | putative carbohydrate kinase (xylulose/erythritol kinase, lyx/eryA-like) BRADO4796 4994460 - 4993345 - | putative sugar ABC transporter, ATP-binding protein TERM 3381 4994054 - 4994022 - G 77 -12.1 -3.64703 | gap 2, opp_overlap 4994013 CCCGCGCCAGCGAAA CGCGCTGCTGCTGTC CGCCC GACAGC-GC-GCGCG GGTAATGATCGAGAA BRADO4797 4995573 - 4994470 - | putative sugar ABC transporter, ATP-binding protein TERM 3382 4994547 - 4994532 - G 70 -11.8 -3.39288 | overlap 4994530 CATGGTCGAACAACA GCGCCG TCTC CGGCGC AAAGCGCACGAACAC BRADO4798 4996437 - 4995580 - | putative sugar ABC transporter, permease protein BRADO4799 4997382 - 4996450 - | putative sugar ABC transporter, permease protein TERM 3383 4996768 - 4996747 - G 70 -11.5 -3.46509 | overlap 4996741 CCTGAAGAACACGAA GCTCGCCGG CACG CCGTCGAGC GCCGCTGCCTCGAAC BRADO4800 4998921 - 4997482 - | putative sugar ABC transporter, periplasmic substrate binding protein TERM 3384 4998295 - 4998316 + g 72 -13 -3.16668 | CATGTCGTCGAGATT GGTCGGCG GCTTGA CGCCGACC TTGCTGAAGATGTTG BRADO4801 4999971 - 4998955 - | putative transcription regulator (EryD-like) TERM 3385 4999089 - 4999063 - G 77 -10.9 -3.86015 | gap 2, opp_overlap 4999062 GAGGCCGTTCAGAAA GCCGCTGCGCAGC ACC GC-GCGCAG-GGC CGTGATCTTCGCTTC TERM 3386 4999096 - 4999131 + g 76 -8.8 -4.18488 | overlap 4999098 4999099 GCGCAGGGCCGTGAT CTTCGCTTCGCCGCCG CCGA TGGCGACGATGCGGTG TTTCTTGAGATCGCT TERM 3387 4999098 - 4999129 + g 70 -10 -3.69068 | overlap 4999096 4999099 GCAGGGCCGTGATCT TCGCTTCGCCGCCG CCGA TGGCGACGATGCGG TGTTTCTTGAGATCG TERM 3388 5000784 - 5000823 + G 76 -14.9 -3.14132 | gap 1 CGGACTCTCCTCATC GGCGCGCGTCGTCGCCGG CACCA CCGACGGCGTCGC-CGCC TTCATCGCCACCGGC BRADO4802 5000128 - 5001402 + | putative carbohydrate kinase BRADO4803 5001399 - 5002268 + | hypothetical protein TERM 3389 5002986 - 5002931 - g 72 -13.8 -3.01712 | gap 1, opp_overlap 5002967 TCGTCTGCCGCAAGA CGCCGCGAGCCACGGCACCGC-GACCG ATC CGTTCAGCCGCGCCGTCGCCACCGGCG GCTCGCTCTATCCGG BRADO4804 5002284 - 5003309 + | putative aldolase/epimerase (AraD-like) BRADO4805 5003946 - 5003530 - | NTF2-like superfamily protein BRADO4806 5004945 - 5004019 - | putative glutathione S-transferase BRADO4807 5005742 - 5004984 - | putative 3-oxoacyl-[acyl-carrier-protein] reductase BRADO4808 5006350 - 5005754 - | putative glutathione S-transferase BRADO4809 5007568 - 5006360 - | putative branched-chain amino acid ABC transporter, periplasmic binding protein BRADO4810 5008763 - 5007609 - | putative carnitine dehydratase/acyl-CoA transferases-related TERM 3390 5007782 - 5007840 + g 77 -13.6 -3.53444 | opp_overlap 5007817 GCCGCAAGGCGGGGT GATGCGCGAGTTCGGCGACGCTATTGAC GAA GCCATAGGCGGTGCCGGCCTCGCGCAGC TTTGCAGCCGCCTGA TERM 3391 5008803 - 5008848 + H 91 -15.3 -3.89881 | gap 1, overlap 5008844 5008845 ACGGCATGCGGCACC GCGCGGGG-AAGGCCATGCCGC ACC GCGACATGGCCCCGCCCCCCGC TTTGTGCGGCTTGGT BRADO4811 5009294 - 5010292 + | LysR family transcriptional regulator TERM 3392 5010314 - 5010298 - f 76 -7.9 -4.36914 | overlap 5010299 5010300 GCGCCGCTGATAAAA CCGGCGA CCG TCGCGGG CTGCCCGACGGGCAG BRADO4812 5011154 - 5013517 + | putative exopolysaccharide polymerization protein, ExoP-like BRADO4813 5013800 - 5013540 - | hypothetical protein BRADO4814 5015220 - 5014015 - | N-acetyl-mannosamine transferase TERM 3393 5015309 - 5015335 + H 74 -4.7 -4.56113 | gap 1, opp_overlap 5015313, overlap 5015313 GGCGGACGACCTCAA TCA-ATCATTTA ATTT TAAATGATCTGA TTTATTTAATGTGTT BRADO4815 5015508 - 5016896 + | putative exopolysaccharide production protein (ExoQ-like); putative membrane protein BRADO4816 5018821 - 5016929 - | pectin lyase-like (virulence factor-like) TERM 3394 5017102 - 5017078 - G 84 -9.1 -4.46112 | TGCTACTCAAATAAA GCGACGCCGGC AAG GCCTGCTCCGC CAAGCCATCAGTCCA BRADO4817 5019072 - 5020022 + | glycosyl transferase family protein BRADO4818 5020105 - 5021361 + | putative acyltransferase; putative membrane protein BRADO4819 5021488 - 5022840 + | hypothetical protein BRADO4820 5022837 - 5024036 + | putative oxidoreductase; NAD(FAD)-dependent dehydrogenases BRADO4821 5024033 - 5024827 + | thioesterase BRADO4822 5026789 - 5024849 - | putative asparagine synthetase TERM 3395 5025831 - 5025868 + g 82 -15.5 -3.36289 | gap 1 ACCTCGTGATGCTCG GTGCCGAGCGCCGTGGCG ATG CGCCGCG-CGATCGGCCC TTCGTTGAGCTCCTG TERM 3396 5026590 - 5026558 - G 72 -14.1 -3.01712 | opp_overlap 5026561 TCTCGCCGTTGAAGA CGATGACGTGCCCGG TCA CCGGATCCGTCATCG GTTGCACGCCGGCCG BRADO4823 5027474 - 5026818 - | hypothetical protein BRADO4824 5028511 - 5027483 - | putative UDP-glucose 4-epimerase (NAD-dependent epimerase/dehydratase) TERM 3397 5027732 - 5027708 - G 73 -9.3 -3.89501 | gap 1 GAAGACCGTGACAAA GGCCAGCCGC ACCGCG GCG-CTGGCC AGCCAATGTGGAACG BRADO4825 5029548 - 5028508 - | NADP-dependent dehydrogenase BRADO4826 5030873 - 5029545 - | putative glycosyltransferase (group 1) BRADO4827 5032483 - 5030984 - | putative polysaccharide transport protein BRADO4828 5033820 - 5032663 - | hypothetical protein BRADO4829 5035174 - 5033849 - | hypothetical protein TERM 3398 5034088 - 5034055 - G 71 -13.8 -2.87564 | gap 1 CGATCGCCCTATAGA GGCCGCGGCG-GCCG AGCTG CGGTTCACCGCGGCC ATCGACGCGCTCGTA BRADO4830 5035769 - 5035227 - | putative dTDP-4-dehydrorhamnose 3,5-epimerase (dTDP-4-keto-6-deoxyglucose 3,5-epimerase) (dTDP-L-rhamnose synthetase), (rfbC-like) TERM 3399 5035595 - 5035624 + g 74 -14.9 -3.05844 | opp_overlap 5035589 5035585 GAAAATGCATGCCAC GCACGGTGCCGCG ATGG CGCGTCACCGAGC TGTTGCCCTGAACGG BRADO4831 5037118 - 5035856 - | putative SAM-dependent methyltransferase BRADO4832 5038226 - 5037189 - | putative sugar nucleotide epimerase/dehydratase TERM 3400 5037548 - 5037528 - G 73 -13.9 -3.15663 | opp_overlap 5037522 ATTCACGGTCAGGAA GCGGCCGCC ATT GGCGGCCGG CCGGTCGATTGCCCA BRADO4833 5038550 - 5039650 + | hypothetical protein BRADO4834 5040491 - 5039838 - | putative deacetylase TERM 3401 5040471 - 5040457 - G 81 -11.4 -3.96224 | overlap 5040446 5040458 CAAAGCACCGACAAA CGGTCG CCG CGACCG GCGAGCTGCAATCCC BRADO4835 5041285 - 5040488 - | putative sugar-phosphate nucleotidyltransferase; putative glucose-1-phosphate cytidylyltransferase (CDP-glucose pyrophosphorylase) TERM 3402 5042758 - 5042775 + G 70 -4.1 -4.56597 | gap 1, opp_overlap 5042754, overlap 5042761 5042762 ATCGCCATCAAGCTC GATTCGGC GGG GCCG-GTC TTTTTCCGGCAGCAG BRADO4836 5041771 - 5043246 + | putative sugar transferase family protein BRADO4837 5043883 - 5043500 - | histone-like nucleoid-structuring protein TERM 3403 5043659 - 5043679 + g 72 -6.8 -4.28432 | gap 1 ATATTTCGGCAGCAC GCGCGG-GT ATTT GCGCCGCGC TTTTCCGTTGGCATT TERM 3404 5045081 - 5045066 - R 74 -10.4 -3.7941 | opp_overlap 5045066 GATTTGCGACAATAA TGCGGC AGGC GCCGCA TTCTCCGGTGGCCGC TERM 3405 5045419 - 5045402 - R 86 -4.7 -5.18355 | opp_overlap 5045414 5045418, overlap 5045418 CCCAAAAAGTAAAAA CCACCGC GATA GCGAAGG GACTTATTAAGTACC TERM 3406 5045591 - 5045604 + r 77 -4.5 -4.8622 | overlap 5045590 5045591 TTCCAGGCGCGCAGC CGTGT TAAC ACGCG TTTTTGCTTCGAAAC BRADO4840 5045932 - 5045708 - | hypothetical protein BRADO4841 5046578 - 5047738 + | putative capsule polysaccharide export outer membrane protein BRADO4842 5048469 - 5048044 - | hypothetical protein TERM 3407 5048573 - 5048516 - R 90 -14.1 -4.09685 | gap 1, opp_overlap 5048518 5048532, overlap 5048518 5048520 5048532 CCTCATGGTCGAAAA CACATGGCCGCACGAATGGCGGGCTGCG ACT CGCAGCCCGCCATTGACTCCGCCA-GCT TGTCGACCGATGCGA TERM 3408 5048571 - 5048518 - R 100 -18.9 -3.64716 | gap 1, opp_overlap 5048518 5048532, overlap 5048516 5048520 5048532 TCATGGTCGAAAACA CATGGCCGCACGAATGGCGGGCTGCG ACT CGCAGCCCGCCATTGACTCCGCCA-G CTTGTCGACCGATGC TERM 3409 5048570 - 5048520 - R 100 -22.6 -3.40175 | opp_overlap 5048518 5048532, overlap 5048518 5048516 5048532 ATGGTCGAAAACACA TGGCCGCACGAATGGCGGGCTGCG ACT CGCAGCCCGCCATTGACTCCGCCA GCTTGTCGACCGATG TERM 3410 5048532 - 5048558 + r 100 -23.8 -3.05463 | opp_overlap 5048520 5048518 5048516 5048532, overlap 5048518 ACATGGCCGCACGAA TGGCGGGCTGCG ACT CGCAGCCCGCCA TTGACTCCGCCAGCT TERM 3411 5048558 - 5048532 - R 100 -23.8 -3.14683 | opp_overlap 5048532 5048518, overlap 5048520 5048518 5048516 ACATGGCCGCACGAA TGGCGGGCTGCG ACT CGCAGCCCGCCA TTGACTCCGCCAGCT BRADO4844 5049018 - 5048716 - | hypothetical protein TERM 3412 5049672 - 5049635 - R 100 -25.7 -3.63068 | opp_overlap 5049641 GCACAGCAGCCCAAA CGACGACGCCGCGCTGA GGGA TCAGCGCGGCGTTGTCG GGTATCGGATGTGAA TERM 3413 5049641 - 5049666 + r 95 -20.5 -3.34962 | opp_overlap 5049635 CAGCCCAAACGACGA CGCCGCGCTGA GGGA TCAGCGCGGCG TTGTCGGGTATCGGA TERM 3414 5049878 - 5049851 - R 70 -10.6 -3.54902 | opp_overlap 5049861, overlap 5049847 5049852 CGAGGTAAGAAGCAA GCCGAGGATCTC TATC GAGATCCTCGAA AGGTCATTCGTCATC TERM 3415 5049877 - 5049852 - R 72 -14.1 -2.72459 | opp_overlap 5049861, overlap 5049851 5049847 GAGGTAAGAAGCAAG CCGAGGATCTC TATC GAGATCCTCGA AAGGTCATTCGTCAT TERM 3416 5051001 - 5051014 + r 81 -4.5 -5.06816 | GTCATCTTACGATTT CGCAG AGCC CTGTG TTTTTGTTAAACAGT BRADO4852 5057659 - 5055920 - | putative nitrilase/cyanide hydratase family protein (carbon-nitrogen hydrolase) TERM 3417 5057561 - 5057587 + g 73 -13.7 -3.19026 | GGCGCCCGACGCGGC CGCCTGCTCGC ACAGC GCGAGCAGGCC TTCGATGTTGCGCTC BRADO4853 5058660 - 5057671 - | putative acetamidase/formamidase family protein TERM 3418 5058312 - 5058344 + g 77 -16.3 -2.66291 | overlap 5058301 CCGGCATGATCACGG TGGTGCCGCGCGG CTGCGGC CCGCGCGGCACGA TGCTCTCGATGTATA BRADO4854 5059408 - 5058692 - | putative branched-chain amino acid ABC transporter ATP-binding protein TERM 3419 5058718 - 5058767 + g 73 -12.7 -3.36327 | overlap 5058719 GGTGGCGGCGCATCT CGGCGGCATCGTCGAGCGCTTCG CGCG CGAGGCTCGCGGTGATGCGGCCC TTGTCCATGACGTAG TERM 3420 5058719 - 5058766 + g 77 -16.2 -2.61582 | overlap 5058718 GTGGCGGCGCATCTC GGCGGCATCGTCGAGCGCTTCG CGCG CGAGGCTCGCGGTGATGCGGCC CTTGTCCATGACGTA BRADO4855 5060117 - 5059401 - | putative branched-chain amino acid ABC transporter ATP-binding protein BRADO4856 5061187 - 5060117 - | branched chain amino acid ABC transporter permease TERM 3421 5060364 - 5060348 - G 75 -13.7 -3.2794 | GGCGACCCAGATCAA CGGCAGC GAG GCTGCCG TCATGCCCATGCTGG BRADO4857 5062064 - 5061192 - | branched chain amino acid ABC transporter permease TERM 3422 5062143 - 5062112 - R 100 -23.1 -3.39717 | overlap 5062098 AGCGATTAAGAGCAA GCCGCTCCGGCGT GAGGGG ACGCCGGAGCGGC CGCTTCCGCCGATCA TERM 3423 5062172 - 5062204 + r 81 -12.7 -3.7282 | overlap 5062165 CAGGGCTTCGGCGGC GGATTCGACGGCGTG TAT TGCGCCATCGGATCC TTCTTGGTCAGGTCG BRADO4858 5063394 - 5062156 - | putative aliphatic amidase expression-regulating protein, amiC BRADO4859 5064069 - 5063404 - | hypothetical protein BRADO4860 5065226 - 5064066 - | putative aliphatic amidase expression-regulating protein, amiC TERM 3424 5064755 - 5064717 - G 71 -13.7 -2.88544 | opp_overlap 5064753 GCCCACGGTCAGATA GCGCTCGGCCAGCACGG TGCCG CCGCGCGCGCTGAGCGC CTCGCGGAAGATGCG TERM 3425 5065277 - 5065249 - R 100 -16.8 -5.93252 | gap 1 CCCAAAAACAAAAAA GCGCCCATCGGCT GTCA AGCCGA-GGGCGC CCTCGCCACCAACCA BRADO4862 5065755 - 5065528 - | hypothetical protein BRADO4863 5066014 - 5066433 + | putative hydrolase BRADO4864 5066650 - 5066441 - | hypothetical protein TERM 3426 5066787 - 5066758 - R 76 -15.7 -2.52464 | opp_overlap 5066756 CCGCCCCTCAAGCGA TCGTGCACGCCGC TTGC GCAGCGTGCACGC CCTCTTCAACGGCAT BRADO4865 5068481 - 5066793 - | putative feruloyl esterase TERM 3427 5068602 - 5068568 - H 86 -16.4 -3.14468 | opp_overlap 5068567 TCCGACCATAGCCAA GCCTGCGCGCGGCC CGCAAGC GTCCGCGCGCAAGC GTTCGATTGAAAACC TERM 3428 5068796 - 5068824 + G 73 -3.8 -4.63218 | gap 1, overlap 5068798 GCTCGACCTCGCCAA GACC-TTGGAGCG CGGC CGCTTCGACGGAC TTTTCTTGGCCGACG TERM 3429 5069723 - 5069774 + G 84 -17.2 -3.16564 | gap 1, opp_overlap 5069693 TCCCGACCGGGTGTG GACCGTGCGCGAGGTCGCCGAGCAC ATC GGGATCGGCGGCATCG-GCCCGGTC TTCGTCGGCTCGCCC BRADO4866 5068665 - 5070023 + | putative luciferase-like protein, putative alkanesulfonate monooxygenase BRADO4867 5070690 - 5070040 - | putative hydantoin racemase or nodulation protein nolU BRADO4868 5071567 - 5070896 - | putative O-methyltransferase TERM 3430 5071753 - 5071702 - g 73 -3.6 -4.63486 | gap 2, opp_overlap 5071735, overlap 5071704 ATCTCCGCAAGAAAA CAGCC-GCAGCAGGCCCGC-TCGA CCGACC TCGTCGCGGCCATTCTGCAGGCCG CTGTTCAGGTTTTGA TERM 3431 5072300 - 5072280 - g 75 -13.9 -3.31144 | TGCGTATCTGGAGAA GGCCGGCGC ACC GCGCCGCCC GCGCACCACCATGTC BRADO4869 5071663 - 5072337 + | TetR family transcriptional regulator TERM 3432 5073576 - 5073590 + F 72 -4.2 -4.65895 | GGACATTGCAGGCGA TCGCCT CTG AGGAGA TTTTTGAATGACACC BRADO4871 5073667 - 5074596 + | aliphatic sulfonate ABC transporter substrate-binding protein BRADO4872 5074679 - 5075296 + | putative NADH dehydrogenase/NAD(P)H nitroreductase metC 5075401 - 5076696 + | O-acetylhomoserine aminocarboxypropyltransferase BRADO4874 5076700 - 5077485 + | putative alpha/beta hydrolase fold-containing protein BRADO4875 5077609 - 5077995 + | putative cell wall or antigenic protein (fragment); putative signal peptide TERM 3433 5078040 - 5078006 - f 75 -12.2 -3.59262 | gap 1, opp_overlap 5078008 5078008, overlap 5078008 5078009 GCTGACATCTTCAAA CATCCGCAGCGGCCC TTAACG GGGCCGCTGC-GACA TTGTGGCGCCGATGC TERM 3434 5078039 - 5078008 - f 84 -15.1 -3.37487 | opp_overlap 5078008 5078008, overlap 5078006 5078009 TGACATCTTCAAACA TCCGCAGCGGCCC TTAACG GGGCCGCTGCGAC ATTGTGGCGCCGATG TERM 3435 5078008 - 5078040 + F 72 -12 -3.29144 | gap 1, opp_overlap 5078006 5078008 5078009, overlap 5078008 TGACATCTTCAAACA T-CCGCAGCGGCCCT TAAC GGGGCCGCTGCGACA TTGTGGCGCCGATGC TERM 3436 5078008 - 5078039 + F 71 -13.6 -2.57344 | opp_overlap 5078006 5078008 5078009, overlap 5078008 TGACATCTTCAAACA TCCGCAGCGGCCCT TAAC GGGGCCGCTGCGAC ATTGTGGCGCCGATG TERM 3437 5078038 - 5078009 - f 87 -18.6 -2.62171 | opp_overlap 5078008 5078008, overlap 5078008 5078006 GACATCTTCAAACAT CCGCAGCGGCCC TTAACG GGGCCGCTGCGA CATTGTGGCGCCGAT BRADO4876 5078153 - 5078557 + | putative signal peptide TERM 3438 5078564 - 5078598 + F 90 -19.5 -2.71483 | gap 1, opp_overlap 5078566, overlap 5078565 TGTCCATAGCGACAC GA-CGATCGATGCCGG AGCG CCGGCATCGATCGCTC TCCTTAGACCAATGT TERM 3439 5078565 - 5078596 + F 91 -18.8 -2.90194 | opp_overlap 5078566, overlap 5078564 GTCCATAGCGACACG ACGATCGATGCCGG AGCG CCGGCATCGATCGC TCTCCTTAGACCAAT TERM 3440 5078595 - 5078566 - f 100 -22.3 -2.65815 | opp_overlap 5078565 5078564 TCCATAGCGACACGA CGATCGATGCCGG AGCG CCGGCATCGATCG CTCTCCTTAGACCAA TERM 3441 5078911 - 5078942 + G 86 -17.3 -3.24747 | GCAGGGCTTCTGGCC GGCGCCGCGATCG GCTCGG CGATCGCCGCGCC TTCCTACTATGGCGG BRADO4877 5078704 - 5079213 + | putative signal peptide cyoB 5081265 - 5079265 - | cytochrome o ubiquinol oxidase, subunit I TERM 3442 5080071 - 5080027 - G 75 -3.3 -4.7254 | overlap 5080029 5080030 ATGCGCCACCAAAAA CAGGCTGTTGTGCAGCAGG AAGTCGG CCGGCGGCACGGCAACCAG CACACCCGTCAGTCC BRADO4879 5082915 - 5081278 - | putative Short-chain dehydrogenase/reductase (modular) TERM 3443 5082443 - 5082414 - G 87 -18.6 -2.73364 | gap 1, overlap 5082390 GCGCCAGCGCAATCA GCCGCGCCGCAGC GAGCT GC-GCGGCGCGGC CGCCGAGGCGCAGGA flgL 5084079 - 5083171 - | flagellar hook-associated protein FlgL BRADO4881 5085840 - 5084095 - | putative flagellar hook-associated protein 1 (HAP1, FlgK protein) BRADO4882 5086314 - 5085862 - | putative flagellar basal-body protein flbY BRADO4883 5086600 - 5086331 - | hypothetical protein flgE 5087850 - 5086603 - | flagellar hook protein FlgE TERM 3444 5087085 - 5087095 + g 83 -8.2 -4.62783 | overlap 5087070 5087069 GCGCGATCGTGCTGT CGGC CGC GCCG TTTTTCCACTGGATG TERM 3445 5087377 - 5087404 + g 70 -12 -3.39449 | gap 1 GAGCGAGGTCTTGGT GGTTGCGCCG-CC ATT GGTCAGCGCAACC TTCGTGTTGATCGGC BRADO4885 5088529 - 5087873 - | putative basal-body rod modification protein flgD TERM 3446 5087959 - 5087979 + gH 84 -16.9 -2.69964 | overlap 5087957 TCGAGGTGTCGATCC CGGTCACCG TGC CGGTGACCG TCGTGTAGTTGAGAA BRADO4886 5088462 - 5088590 + | hypothetical protein TERM 3447 5088724 - 5088708 - TR 77 -2.2 -5.02476 | gap 1, overlap 5088709 AGAGGCGGCAAAAAA CGCC-CG GTGC CGCGACG GATCCGACCAGCAGC BRADO4887 5089179 - 5088883 - | hypothetical protein BRADO4888 5089812 - 5089387 - | putative flagellar protein fliS TERM 3448 5089735 - 5089777 + g 74 -15.4 -2.53911 | CAGCAGCATGATCAC GGCCCGCAGCGGCGGTACTG CGA CAGCAGCGCCGCGGTAGGCC TGACTTGCCAATTGC BRADO4889 5091383 - 5089812 - | putative flagellar hook-associated protein 2 (HAP2, fliD protein) TERM 3449 5091577 - 5091547 - R 100 -21.8 -4.25104 | overlap 5091548 CGTCCTCCAGGAAAA GCGCCGGACCGGCG TCA CGCCGGCCCGGCGG GTCAGGTATCAGCCC TERM 3450 5091576 - 5091548 - R 100 -25.3 -3.14848 | overlap 5091547 GTCCTCCAGGAAAAG CGCCGGACCGGCG TCA CGCCGGCCCGGCG GGTCAGGTATCAGCC BRADO4890 5092413 - 5091586 - | putative flagellin BRADO4891 5093256 - 5092552 - | RNA polymerase sigma factor TERM 3451 5093596 - 5093578 - H 85 -3 -5.26316 | opp_overlap 5093583 5093584, overlap 5093579 5093580 TGAGTTCACAAAAAA CTGCCCGC CAG GCGAGAAA ATCGCTCGGCAATTT BRADO4894 5094144 - 5095472 + | hypothetical protein BRADO4895 5095492 - 5096217 + | putative methionyl-tRNA formyltransferase BRADO4896 5096787 - 5096269 - | putative Cob(II)yrinic acid a,c-diamide reductase, bluB cobB 5098262 - 5096922 - | cobyrinic acid a,c-diamide synthase TERM 3452 5098823 - 5098803 - g 72 -5.3 -4.41047 | overlap 5098804 AGCTGGCAAGGAAAA CGCTGAACC CGC GGCTCGGCA TCGTCGGCGGCCTGT cbiD 5098298 - 5099440 + | cobalt-precorrin-6A synthase cobM 5100171 - 5099410 - | precorrin-4 C(11)-methyltransferase BRADO4900 5100584 - 5100168 - | putative CobE protein cobL 5101798 - 5100563 - | precorrin-6Y C(5,15)-methyltransferase TERM 3453 5101021 - 5101066 + g 73 -6 -4.4009 | opp_overlap 5101015 CCCACAGCAGCTCGC CG-GGCGTCGGCGCGAGTGCCG ACAG CGTCGCG-GCGCGGACGTCACG TTTTGTGAGCTGGCC TERM 3454 5102527 - 5102487 - g 75 -14 -3.28712 | gap 1, opp_overlap 5102508 CTCGCGGCCGGAGAA GCCGCACGGCGTCGCGC TGGACGGT GCGCGA-GCCGCGCTGC AGTGGCTCGAGACGC cobK 5101813 - 5102586 + | precorrin-6A reductase cobJ 5103317 - 5102550 - | precorrin-3B C(17)-methyltransferase TERM 3455 5102874 - 5102842 - G 71 -9.7 -3.78953 | opp_overlap 5102864, overlap 5102843 AGCGCGATCACGAAA TCGGCGCCCGCCG CGGCCTC CAGCCGGCGCCGG ATCGTCGCCCAGCTC TERM 3456 5102962 - 5102923 - G 77 -5.6 -4.59109 | gap 1, overlap 5102924 5102925 GAGATCGCGCAAAAA TCCCCGCC-CAGCGGCG CGCCGAT CTCGGCTGCGGCGGCGA GCATCGCCGTCACAC cobI 5104072 - 5103314 - | precorrin-2 C(20)-methyltransferase cobH 5104701 - 5104069 - | precorrin-8X methylmutase BRADO4906 5105974 - 5104694 - | putative precorrin-3B synthase (cobG) cobN 5109381 - 5105971 - | cobaltochelatase TERM 3457 5108302 - 5108248 - G 73 -12.7 -3.41745 | gap 2, overlap 5108245 5108244 GTCCGACAACATCAA CGCGACGCGGCGATCGCCGGCCGGCAG CGT CCGCAGGC-G-CGCCCATCGCGCCGCG AGCTGCGCGACATAG BRADO4908 5110428 - 5109391 - | putative cobalamin synthesis protein cobW BRADO4909 5110842 - 5110444 - | hypothetical protein BRADO4910 5111475 - 5110843 - | putative HupE/UreJ protein cobU 5111827 - 5112360 + | adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase cobO 5112374 - 5112982 + | Cob(I)yrinic acid a,c-diamide adenosyltransferase TERM 3458 5113148 - 5113123 - g 93 -17.6 -3.65201 | GAACATGTCGAACAA CGCCGCCGTC ACCGCG GACGGCGGCG AGATCGGCCGCGCCC TERM 3459 5113537 - 5113564 + G 75 -2.7 -4.72272 | gap 2, opp_overlap 5113525 CAAGGCGGTTCTCGC GCC-G-GACGATG CCGC CCTCGTCGCAGGC TTTTTGGTCAACCGA cobQ 5112986 - 5114473 + | cobyric acid synthase BRADO4914 5115431 - 5114460 - | cobalamin biosynthetic protein (anaerobic pathway of cobalamin biosynthesis, cobD) BRADO4915 5115454 - 5116476 + | putative threonine-phosphate decarboxylase BRADO4916 5117192 - 5116473 - | cobalamin synthase BRADO4917 5117782 - 5117189 - | putative Alpha-ribazole phosphatase (anaerobic pathway of cobalamin biosynthesis, cobC) cobT 5118837 - 5117782 - | nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase speF 5119027 - 5121384 + | ornithine decarboxylase BRADO4920 5121392 - 5121964 + | putative phosphinothricin N-acetyltransferase BRADO4921 5122178 - 5121966 - | hypothetical protein BRADO4922 5123658 - 5122609 - | putative D-3-phosphoglycerate dehydrogenase (PGDH) TERM 3460 5122684 - 5122741 + g 71 -12.6 -3.29144 | gap 2, overlap 5122687 GGGGTTGATCAGCCG CGGCGGCCGGCT-GCCGTCGAGC-GCGG CGAG CAGCTGCTCGGCGGCGATCCGGCCCATG TTCTGCCGCGCCTCG TERM 3461 5122687 - 5122738 + g 71 -15.1 -2.52623 | gap 2, overlap 5122684 GTTGATCAGCCGCGG CGGCCGGCT-GCCGTCGAGC-GCGG CGAG CAGCTGCTCGGCGGCGATCCGGCCC ATGTTCTGCCGCGCC TERM 3462 5123661 - 5123676 + H 84 -3.9 -5.22794 | AATTCGCGGCCATGG CCGGG CGACCT CCTGG TTTTTTGCTGCTTGT BRADO4924 5123799 - 5124347 + | putative sulfopyruvate decarboxylase (alpha subunit) BRADO4925 5124344 - 5124943 + | hypothetical protein TERM 3463 5125172 - 5125185 + G 72 -6.7 -4.2679 | GTAGCCTTCGCCACC TTGGG TCCT CCCAA TTTTCGTCCGCATTC BRADO4926 5125172 - 5125465 + | hypothetical protein TERM 3464 5125461 - 5125514 + T 72 -12.1 -3.35015 | opp_overlap 5125471, overlap 5125472 5125504 TCGGCCCGCAACCGA CCTGAACGCAGCGGGGCCCCGCCGC TGAC GCGGCGAGGCCCCGTGATGTGACGG TTGTCAGATCATTCG TERM 3465 5125504 - 5125471 - T 100 -23.1 -2.53995 | opp_overlap 5125461 5125472 ACCGACCTGAACGCA GCGGGGCCCCGCCGC TGAC GCGGCGAGGCCCCGT GATGTGACGGTTGTC TERM 3466 5125472 - 5125503 + T 100 -24.4 -2.6381 | opp_overlap 5125471, overlap 5125461 CCGACCTGAACGCAG CGGGGCCCCGCCGC TGAC GCGGCGAGGCCCCG TGATGTGACGGTTGT BRADO4927 5125912 - 5125523 - | putative signal peptide BRADO4930 5127237 - 5127025 - | hypothetical protein BRADO4932 5127568 - 5127383 - | hypothetical protein BRADO4934 5128050 - 5128226 + | hypothetical protein BRADO4935 5128402 - 5128196 - | hypothetical protein BRADO4936 5128718 - 5128371 - | hypothetical protein BRADO4938 5129200 - 5129667 + | hypothetical protein BRADO4939 5130470 - 5129847 - | putative glutathione S-transferase TERM 3467 5130190 - 5130160 - G 74 -10.5 -3.83026 | overlap 5130162 GCGCCCGAGACGAAA TACAGCGAGGC-GGC GAG GCCGGCCTCGCCG-A GGTGGAGAAACTGCT TERM 3468 5130189 - 5130162 - G 83 -15.6 -3.5032 | gap 1, overlap 5130160 GCCCGAGACGAAATA CAGCGAGGC-GGC GAG GCCGGCCTCGCCG AGGTGGAGAAACTGC TERM 3469 5130830 - 5130798 - g 73 -15.5 -2.52516 | overlap 5130797 GCGCTCACCATGAAT GCCGACCTCGGCCTG TCG CAGACCGCGTTCGGC TTCGGCGCCGGCATC BRADO4940 5130669 - 5130902 + | permease (fragment) BRADO4941 5132294 - 5130915 - | hypothetical protein BRADO4942 5135088 - 5132311 - | CbxX/CfqX family protein hyi 5136872 - 5136081 - | hydroxypyruvate isomerase TERM 3470 5136722 - 5136747 + g 78 -14.7 -3.31792 | GGGTCAGGCCGTGGC GGGCGAGCTGC TCGC GCAGCTCGGCC TTGTCGAACTCGTAG gcl 5138693 - 5136906 - | glyoxylate carboligase TERM 3471 5138723 - 5138745 + r 74 -14.2 -2.55544 | overlap 5138718 5138718 TTTTTGATGCGCGAG GATCGCTGCT GTG GGCAGCGATC TCAATTCAGTCGTCG BRADO4947 5140664 - 5138862 - | putative adenine deaminase TERM 3472 5139654 - 5139611 - G 70 -11.5 -3.44051 | gap 1 CGTCGAGCAGCACAA GGTCGGCGCG-GCGGCCGCC ACCGA GGCCGCCGATCTCGCCGTCC ATGGCAAAGCGCGTC BRADO4949 5141000 - 5141494 + | hypothetical protein BRADO4951 5142091 - 5141630 - | hypothetical protein TERM 3473 5142149 - 5142135 - R 73 -2.8 -4.81249 | opp_overlap 5142135, overlap 5142127 GTGCAAATCGAAAAA CTCG CGCTAAC CGAG ATTATCGATGCCGCG BRADO4952 5143020 - 5142175 - | glyoxylate bypass operon transcriptional repressor TERM 3474 5143131 - 5143102 - R 100 -17.1 -4.49958 | overlap 5143103 ACGCTATCAAATAAA GTGCCGCCCCGGC GAGA GCCGGAGCGGCAT TCGCGTCACGATGAC TERM 3475 5143130 - 5143103 - R 95 -20.6 -3.29252 | overlap 5143102 CGCTATCAAATAAAG TGCCGCCCCGGC GAGA GCCGGAGCGGCA TTCGCGTCACGATGA BRADO4953 5145288 - 5143147 - | hypothetical protein TERM 3476 5145586 - 5145574 - g 73 -9.1 -3.95324 | GAGCTTCAAGAATAA GGCCT ATG AGGCC TTGAAAGAAGCCATT BRADO4954 5145479 - 5146210 + | GntR family transcriptional regulator BRADO4955 5146275 - 5148005 + | putative oxalyl-CoA decarboxylase BRADO4956 5148067 - 5149344 + | formyl-coenzyme A transferase TERM 3477 5149424 - 5149404 - T 95 -19.7 -3.15544 | opp_overlap 5149404 5149420 GCTCACCTCTAGGAA GCCGCCGGG TCG CCCGGCGGC TTTTTGATTCTACCG TERM 3478 5149404 - 5149424 + T 100 -19.7 -4.93365 | opp_overlap 5149404, overlap 5149420 GCTCACCTCTAGGAA GCCGCCGGG TCG CCCGGCGGC TTTTTGATTCTACCG BRADO4957 5150218 - 5149469 - | hypothetical protein TERM 3479 5150859 - 5150870 + G 74 -2.2 -4.83615 | overlap 5150850 CGGCTTTGCGCCCCA GCAG CATC TTGC TTTTTATCGACGCTA BRADO4958 5150497 - 5150904 + | hypothetical protein TERM 3480 5151441 - 5151406 - g 70 -3.8 -4.46212 | overlap 5151407 5151426 CTGGCCACGAGAAAA CCGAGACCTTGCAGAC CAGA GTCTGCGCGATCGCGC AGTCGGGCAACCCAG BRADO4959 5151015 - 5151530 + | putative signal peptide BRADO4960 5152300 - 5151821 - | hypothetical protein BRADO4961 5152571 - 5153428 + | hypothetical protein BRADO4962 5153735 - 5153836 + | hypothetical protein TERM 3481 5153931 - 5153953 + F 100 -12.7 -5.75599 | TATCCTCCCGACTGA TGGCTCCGG ATTTA CCGGGGCCA TTTTTTTATGCTTTG oxlT 5154125 - 5155411 + | putative oxalate/formate antiporter TERM 3482 5155492 - 5155464 - f 74 -11.7 -3.50393 | opp_overlap 5155468, overlap 5155468 GCCGATTTGACACAA GCAACGCTCGGCA TTT TGCCGAGCGTTTT CTTTTGCTTGCTGGC TERM 3483 5155488 - 5155468 - f 93 -16.9 -3.49886 | opp_overlap 5155468, overlap 5155464 ATTTGACACAAGCAA CGCTCGGCA TTT TGCCGAGCG TTTTCTTTTGCTTGC TERM 3484 5155468 - 5155488 + F 100 -16.9 -5.18643 | opp_overlap 5155468 5155464 ATTTGACACAAGCAA CGCTCGGCA TTT TGCCGAGCG TTTTCTTTTGCTTGC oxlT 5155662 - 5156981 + | putative oxalate/formate antiporter TERM 3485 5157007 - 5157030 + F 100 -14.6 -5.40072 | CTTCCCACGACTCGA GGAGGCGCAT CCCG GTGCGCCTCC TTTTTTTGACGCCAG BRADO4965 5157196 - 5157615 + | hypothetical protein TERM 3486 5157700 - 5157722 + F 95 -16.3 -3.90744 | opp_overlap 5157656 GGCGGCACGATGGAG GGCGACGGC ACCGG GCCGTCGCC TTGTTTGACCCGACA BRADO4966 5157748 - 5158716 + | putative NADPH quinone oxidoreductase TERM 3487 5158922 - 5158884 - g 72 -11.7 -3.54543 | gap 1 ATCGAGTCCGGGAAA GCCCGTG-TCGCCGCGAT CTCG ATCGCGGCGAGCGCCAGC ATGGCGGCGGCGAAG TERM 3488 5159543 - 5159508 - g 79 -11.9 -3.85698 | opp_overlap 5159488 GGCGCCGCCGAGAAA GCCGACGCC-GCGATCC GTTC GG-TCGCCGGCGTCGTC GACGTCGAGCGGCTG BRADO4967 5158848 - 5160236 + | putative cation-efflux pump BRADO4968 5160446 - 5162770 + | two-component sensor histidine kinase BRADO4969 5164299 - 5162941 - | putative transposase TERM 3489 5163490 - 5163534 + g 79 -4.8 -4.73388 | overlap 5163502 CCGCGCCTGCGGATC GGTGGTGGAGGCCCGAGGCT CCTTC GGCTTCTTGCCGTTACCGCC TTTTTCCTCGAGCTT TERM 3490 5164479 - 5164528 + r 91 -19.3 -2.87132 | gap 1 GCAGTGCCTGTGACT GCGCCCTCTCTCCCCTGGCTAAGC TCT GCTTCGCTTGGGG-GAGAGGGCAC TGTATCGAGCGGCCG BRADO4970 5165194 - 5164643 - | hypothetical protein TERM 3491 5165343 - 5165358 + H 71 -9 -3.72576 | GGTGCGGACGCATGC GATGGC CGGT GCCATC TTTGGTGGAGGACAA BRADO4972 5165378 - 5165683 + | hypothetical protein BRADO4973 5166926 - 5165685 - | hypothetical protein TERM 3492 5166343 - 5166323 - G 72 -6.7 -4.25104 | TCCCGGCCATCAAAA CGAGGCAGA GCG CCAGCCCCG GCATCCAGCCGAGCG BRADO4974 5168169 - 5167213 - | LysR family transcriptional regulator fdsG 5168368 - 5168844 + | formate dehydrogenase subunit gamma TERM 3493 5168843 - 5168853 + G 86 -6.8 -4.85599 | overlap 5168834 CGGAGGCCCAGCGAT GACG TTG CGTC TTTTTGTCCCGTGCG fdsB 5168841 - 5170397 + | putative formate dehydrogenase beta subunit TERM 3494 5171435 - 5171423 - g 79 -7.7 -4.46212 | overlap 5171426 CTTCGCAGCACAAAA GATGC GCG GCATC CAGGCCAAGTATGGC fdsA 5170422 - 5173301 + | formate dehydrogenase, alpha subunit TERM 3495 5173536 - 5173497 - g 76 -15.2 -3.15579 | gap 1, overlap 5173487 5173511 CGAAGGGCTTATCAA GAGCCGCGACGACATCG TCTCGCT CGATGTCGTCG-AGCTC GATGACGGCATCGAG fdhD 5173315 - 5174151 + | formate dehydrogenase accessory protein TERM 3496 5174251 - 5174225 - g 70 -3.7 -4.57073 | overlap 5174228 CAGGGCCGGGAAAAA GAGGTCGC-CGGC GTC GCCGAGC-ACATC AAGAAGTTCTGGGAC fdsD 5174141 - 5174386 + | putative formate dehydrogenase delta subunit BRADO4980 5175727 - 5174498 - | voltage-dependent potassium channel TERM 3497 5174673 - 5174653 - G 72 -6.8 -4.18018 | CTTGGGCATCCAAAA CCAGCAAG CGGGT CTTGCGGG TCGCGGTGACGGTGC alaS 5178405 - 5175730 - | alanyl-tRNA synthetase gcvT 5178841 - 5179998 + | glycine cleavage system aminomethyltransferase T gcvH 5180008 - 5180373 + | glycine cleavage system protein H gcvP 5180529 - 5183402 + | glycine dehydrogenase TERM 3498 5183464 - 5183432 - T 78 -10.5 -4.08064 | opp_overlap 5183438, overlap 5183433 AAGGTCGCTTGAAAA TCGGAAGCCGGGTGC ATC ACACCCGGCTTTCAG TTTGCTGAAAAGATC TERM 3499 5183463 - 5183433 - T 75 -14 -3.04517 | opp_overlap 5183438, overlap 5183432 AGGTCGCTTGAAAAT CGGAAGCCGGGTGC ATC ACACCCGGCTTTCA GTTTGCTGAAAAGAT TERM 3500 5183438 - 5183458 + T 86 -14 -3.87149 | opp_overlap 5183433 5183432 GCTTGAAAATCGGAA GCCGGGTG CATCA CACCCGGC TTTCAGTTTGCTGAA TERM 3501 5183534 - 5183505 - T 100 -12.2 -4.4078 | gap 2, opp_overlap 5183499, overlap 5183521 TCGCTCCAACGAAAA CGGGCGCCGCAGTC AACC GAC--CGGCGCCCG CTCCGCTTTGGCTTT recA 5184655 - 5183567 - | recombinase A TERM 3502 5184878 - 5184856 - H 73 -6.3 -4.38712 | overlap 5184858 GCCACCCTCAGAAAA CTCGCGA AGTCACGGA TCGCGAG CGCCGCGGGATGACA BRADO4987 5185099 - 5185392 + | hypothetical protein TERM 3503 5185991 - 5186028 + F 74 -5 -4.5442 | overlap 5185977 5185994 GTGTTCGATTTCGTG CGGCGCATGTCGAAC-AG TTTA CTCGTTCGATA-GCGTTG TTTTGTCCTTCCAGG TERM 3504 5186127 - 5186153 + F 93 -13.8 -4.11216 | opp_overlap 5186127 TCCGCGCCAAAGAAA GCCTTGGACC CAGGTCA GGTCCAAGGC TTTTGACGCTGGGCG TERM 3505 5186153 - 5186127 - f 100 -15.2 -4.41348 | opp_overlap 5186127 TCCGCGCCAAAGAAA GCCTTGGACCCA GGT CAGGTCCAAGGC TTTTGACGCTGGGCG TERM 3506 5186344 - 5186399 + F 78 -14.9 -2.98823 | gap 3 CCCTGGTCGGGAAGC TGCGACGCTGAC-CTCGAGCCTCGGATC AGC GATCCGAGGCTCACGCGTCGGC--CGCA TATGTGTCGGCGCAC BRADO4989 5186498 - 5186824 + | hypothetical protein BRADO4990 5187026 - 5187157 + | hypothetical protein BRADO4991 5187354 - 5187175 - | hypothetical protein BRADO4992 5187791 - 5187522 - | hypothetical protein BRADO4993 5188093 - 5188533 + | putative thioesterase superfamily protein BRADO4994 5188679 - 5188930 + | hypothetical protein BRADO4995 5190511 - 5189000 - | hypothetical protein TERM 3507 5189303 - 5189348 + g 73 -15.4 -2.53112 | gap 1, opp_overlap 5189326 5189329, overlap 5189302 GCACGGACACGTCGG TCCGGCTGTGGCGCTGGCCGA AACGA TCGGC-GGCGCGGCCGCCGGA ATTGCTGCATTGGCT BRADO4996 5190598 - 5191125 + | hypothetical protein TERM 3508 5192148 - 5192108 - g 70 -10.9 -3.50853 | opp_overlap 5192122 5192130, overlap 5192111 CGCTCTGAAGGACAA CGAGGCGATCAGCGTCGAG GTG CTCGACGCGGTGCGCCACC ATCACGAGTTTCTCG TERM 3509 5192145 - 5192111 - g 76 -15.6 -2.89447 | opp_overlap 5192122 5192130, overlap 5192108 TCTGAAGGACAACGA GGCGATCAGCGTCGAG GTG CTCGACGCGGTGCGCC ACCATCACGAGTTTC BRADO4997 5191296 - 5192378 + | hypothetical protein TERM 3510 5192925 - 5192944 + G 85 -16.4 -3.40403 | GCTGGATACGGCACG GCGCGCGG GCGC CCGCGCGC TTCTGCTCCGGGACA BRADO4998 5192479 - 5193741 + | putative Acyl-CoA N-acyltransferase BRADO4999 5194381 - 5193719 - | putative DSBA oxidoreductase BRADO5000 5195266 - 5194451 - | XRE family transcriptional regulator BRADO5001 5195180 - 5195365 + | hypothetical protein BRADO5002 5195368 - 5195592 + | hypothetical protein BRADO5003 5195625 - 5196023 + | hypothetical protein TERM 3511 5196027 - 5196081 + F 100 -19.5 -3.53031 | gap 3, opp_overlap 5196037 CTGACGGCTTGAGCC GCGGAGATGACGTGCGCC-GGCCGCT GCGACG AGCGGCCCGGCGCTCG--ATCTCCGC TTGATTTGACATGCA TERM 3512 5196073 - 5196037 - f 83 -17.3 -2.62396 | gap 1, opp_overlap 5196027 GAGCCGCGGAGATGA CGTGCGCC-GGCCGCT GCGACG AGCGGCCCGGCGCTCG ATCTCCGCTTGATTT BRADO5004 5196146 - 5196763 + | putative S-adenosyl-L-methionine (SAM)-dependent methyltransferase BRADO5005 5197458 - 5196790 - | histone-lysine N-methyltransferase BRADO5006 5198330 - 5197632 - | hypothetical protein BRADO5007 5199086 - 5198376 - | TetR family transcriptional regulator BRADO5008 5199196 - 5200608 + | putative carotenoid oxygenase BRADO5009 5200671 - 5201228 + | putative intracellular septation protein TERM 3513 5201797 - 5201811 + G 70 -4.2 -4.56775 | overlap 5201777 5201774 GTGCCGGCCGAAACC GCCG CCATGCC CGGC TTTTTGCGCGCAAAT TERM 3514 5202030 - 5201997 - g 82 -12.5 -3.9712 | gap 1 GTATCGCAGGACAAA GGACATCGCCGC-GCA GAC TGCCGCCGCAATGTCC GGCCAGGATTCGTGA BRADO5010 5201461 - 5202045 + | hypothetical protein BRADO5011 5202069 - 5202620 + | putative intracellular septation protein BRADO5012 5202758 - 5203054 + | putative signal peptide TERM 3515 5203196 - 5203156 - T 79 -15.4 -2.88861 | gap 1, opp_overlap 5203166 GATTACGCCGATAGA CGGTGGGCA-CGCGACGCC TGAC GGCGCCGCTTTGCCCACCC TACGCTGCCTCGGCA TERM 3516 5203166 - 5203185 + T 70 -10.6 -3.53811 | opp_overlap 5203156 ATAGACGGTGGGCAC GCGACGCC TGAC GGCGCCGC TTTGCCCACCCTACG TERM 3517 5204014 - 5203960 - T 87 -19.3 -2.70932 | opp_overlap 5203971, overlap 5203964 5203988 5203990 GGGGCGTGCGAAGCA CGAACCCGGACTCCATCGGGCGACA GCAGA CGCAGCCCGATGGATTCTGGGCTCG CCGCGCTATGGGCGT TERM 3518 5204010 - 5203964 - T 84 -15.1 -3.27298 | opp_overlap 5203971, overlap 5203960 5203988 5203990 CGTGCGAAGCACGAA CCCGGACTCCATCGGGCGACA GCAGA CGCAGCCCGATGGATTCTGGG CTCGCCGCGCTATGG BRADO5014 5204606 - 5204082 - | hypothetical protein BRADO5015 5205221 - 5204778 - | dehydratase fumA 5206916 - 5205261 - | fumarase A (fumarate hydratase class I) TERM 3519 5206493 - 5206533 + g 75 -11.7 -3.63991 | opp_overlap 5206472 GCGCGCCTTCCGAGA GCGCGGCCTCGTCGTCACC GTC GGTGATGACGTTGCAGCCC TTCTTGCCCATGATG BRADO5018 5207494 - 5207907 + | hypothetical protein BRADO5019 5208123 - 5208284 + | hypothetical protein TERM 3520 5208310 - 5208347 + T 100 -26.5 -3.08679 | gap 1 CCCTCAGGCCAACTT CGTATAGCGGCG-GCGCC TTC GGCGCTCGCCGCTATACG TGTTGGGTCCGCAGG BRADO5020 5209345 - 5208641 - | putative glutathione S-transferase P subunit BRADO5021 5210093 - 5209401 - | putative C-type lectin-like TERM 3521 5210202 - 5210237 + r 73 -8.8 -4.05714 | opp_overlap 5210207, overlap 5210204 5210207 CAGAACCCGGGCAAA GCAAAGGCGCCGCAGA GGGC TCCGCGGCGCCTGATC TTTGTCATTAAGGCT TERM 3522 5210204 - 5210235 + r 70 -10 -3.6217 | opp_overlap 5210207, overlap 5210202 5210207 GAACCCGGGCAAAGC AAAGGCGCCGCAGA GGGC TCCGCGGCGCCTGA TCTTTGTCATTAAGG TERM 3523 5210207 - 5210232 + r 83 -16.1 -2.92326 | opp_overlap 5210207, overlap 5210204 5210202 CCCGGGCAAAGCAAA GGCGCCGCAGA GGGC TCCGCGGCGCC TGATCTTTGTCATTA TERM 3524 5210232 - 5210207 - R 100 -18.3 -4.05788 | opp_overlap 5210207 5210204 5210202 CCCGGGCAAAGCAAA GGCGCCGCAGA GGGC TCCGCGGCGCC TGATCTTTGTCATTA BRADO5022 5211232 - 5210258 - | putative signal peptide TERM 3525 5210991 - 5210934 - G 88 -16.2 -3.72576 | gap 2, opp_overlap 5210952, overlap 5210905 5210917 5210980 CCGGCGCCGAGGAAA CCCGCGGCAAGGCCGCCGAGCAGGCCGC CGGC GCGGCC-GCCGAACAGGCC-GCCGCGGG ACGGCGCAGCCTGAT BRADO5023 5213919 - 5211388 - | two-component sensor histidine kinase TERM 3526 5212979 - 5212933 - G 81 -16.5 -3.20367 | gap 2, overlap 5212924 GAAGAAGCGCATGAA GCGCACCTCGGCGGCGCGCTCCG GAT CGGAGCGCTC-GTCGCGG-GCGC GGCTGATGACCAGGG TERM 3527 5213289 - 5213278 - G 76 -2.2 -4.88067 | gap 1, overlap 5213279 ATTGACCGAGAAAAA GCCGC AGG GCG-C ATGGTCGAGATATTC flhB 5215193 - 5214114 - | flagellar biosynthesis protein FlhB TERM 3528 5215115 - 5215142 + g 81 -7.6 -4.66609 | gap 1, overlap 5215117 GGCTCTTGACGACGT CGCCGCGCTCCAG CGC CTGGT-CGAGGCG TTTTTGCGTCGGGTC fliR 5215975 - 5215208 - | flagellar biosynthesis protein FliR TERM 3529 5215993 - 5216020 + r 83 -14.8 -3.53012 | gap 1 TCAGCGGTCCCGGCG CCGCCG-GCCGCG AGC CGCGGCACGCCGG TTTGCAGAGCGCCAA fliQ 5216409 - 5216146 - | flagellar biosynthesis protein FliQ fliE 5216901 - 5216545 - | flagellar hook-basal body protein FliE flgC 5217343 - 5216918 - | flagellar basal body rod protein FlgC flgB 5217783 - 5217376 - | flagellar basal body rod protein FlgB TERM 3530 5217879 - 5217897 + H 100 -16 -4.18763 | AAACGATGCGCTGCC CCCCGGGA CTA TCCCGGGG TTTTGACACTTTCTT TERM 3531 5218019 - 5218033 + H 89 -11.4 -4.27316 | opp_overlap 5218019 5218018 5218014, overlap 5218031 TATTAAGATACCAAG CGGCAG ATC CTGCCG TTTTGCGTTAACGGG BRADO5030 5218172 - 5219221 + | hypothetical protein fliP 5219293 - 5219973 + | flagellar biosynthesis protein FliP TERM 3532 5220151 - 5220098 - T 77 -13.7 -3.29829 | gap 1 CACAGCTCGTGAGAA CCCGGATATCGCGTCCGCCTCCGCCC TCC GGGCGCAGGCTTCCGCT-CATCCGGG CTACGCTTCTGCTGG TERM 3533 5220235 - 5220288 + T 84 -16.7 -3.10164 | opp_overlap 5220202, overlap 5220200 GCCGGAGGCCTTGAG CCCGGAATCTCGAGCCTGTCTTGCG TCGA TGCCAAACCAGCTCGGGATTCCGGG TTCAATCGTCCATGC TERM 3534 5220294 - 5220332 + T 100 -21.8 -3.06183 | GGATTCCGGGTTCAA TCGTCCATGCGCAGCCGC TTC GCGGCTCCGCATCGACGA TTGCCTCGGAATGAC BRADO5032 5224187 - 5220381 - | hypothetical protein TERM 3535 5220413 - 5220462 + g 78 -15.8 -3.18199 | gap 2, overlap 5220454 CCTGCTTGACGCCCT GGATGCGCGGCAGGGCGCCGGTCG ACTC CGAC-GGCGCCTTCGC-CGCATCC TTGCCTTCCGGCTTG TERM 3536 5224100 - 5224064 - G 74 -15.8 -2.62616 | gap 1, opp_overlap 5224059 GGATGGCCGACAGCA GCGCAAGGCCGGCGCGC ACGC GCGCGCGGGCCT-GCGA CCGCAATCCATTGGG BRADO5033 5225005 - 5224235 - | putative signal peptide BRADO5034 5225490 - 5225002 - | putative methyl-accepting chemotaxis protein fliM 5226689 - 5225487 - | flagellar motor switch protein FliM fliL 5227203 - 5226709 - | flagellar basal body-associated protein FliL TERM 3537 5227118 - 5227079 - G 79 -7 -4.57882 | gap 1, overlap 5227081 5227082 CTGAAGAAGAAGAAA TAGGCCGCGCCGCCGATGC CGA GCAGCGCCAGCGCA-CCGA CGACCATGATGATCA TERM 3538 5227116 - 5227081 - G 71 -9.6 -3.88654 | gap 1, overlap 5227079 5227082 GAAGAAGAAGAAATA GGCCGCGCCGCCGATGC CGA GCAGCGCCAGCGCA-CC GACGACCATGATGAT flgF 5227592 - 5228356 + | flagellar basal body rod protein FlgF flgG 5228382 - 5229170 + | flagellar basal body rod protein FlgG TERM 3539 5229881 - 5229854 - g 77 -13.4 -3.57792 | gap 1 CGAGCGACGGCCAAA GGTCGAGCTCGGC GGC GCCGAGC-CGGCC TCGCGCGAACTCGCG flgA 5229189 - 5230244 + | flagellar basal body P-ring biosynthesis protein FlgA flgH 5230250 - 5231029 + | flagellar basal body L-ring protein TERM 3540 5231082 - 5231043 - T 71 -13.6 -2.62396 | gap 1, opp_overlap 5231069 GAGGCGGCGACACGA TCGCAGGACCGGGCGG-AT CGC ATCCCGCCCGGTCGCGAGA CGACCGCCGGCTCTG TERM 3541 5231167 - 5231146 - T 89 -11.5 -4.3014 | overlap 5231147 AGACATCGACGAAAA TCCCTCGCC GCAC GGCGAGGGT CAGGCAAGGAATTGG TERM 3542 5231166 - 5231147 - T 80 -15 -3.17361 | overlap 5231146 GACATCGACGAAAAT CCCTCGCC GCAC GGCGAGGG TCAGGCAAGGAATTG TERM 3543 5231282 - 5231324 + T 81 -14.1 -3.55444 | opp_overlap 5231266 5231284, overlap 5231286 5231320 GCGCCGCGGGTAATG TATACGCGGCCTCCGGTAG CTCCC CTGCCGGAGGCCGTGTTCG TTTGAGGGATCAGCG TERM 3544 5231322 - 5231284 - T 74 -14.5 -2.52464 | opp_overlap 5231282 5231286 5231320, overlap 5231266 GCCGCGGGTAATGTA TACGCGGCCTCCGGTAG CTCCC CTGCCGGAGGCCGTGTT CGTTTGAGGGATCAG TERM 3545 5231286 - 5231320 + T 100 -21.5 -3.51708 | opp_overlap 5231266 5231284, overlap 5231282 CGCGGGTAATGTATA CGCGGCCTCCGGTAG CTCCC CTGCCGGAGGCCGTG TTCGTTTGAGGGATC BRADO5041 5232353 - 5231562 - | putative hydratase/decarboxylase; putative 4-oxalocrotonate decarboxylase TERM 3546 5232110 - 5232060 - G 75 -13.3 -3.35813 | GCCGACGCGAACGAA GTCGGCCGCGCGCAGCGTG-ACACC CGA GGCGTGCACGCCGCCCGCGAA-GAC GCCGCCGGCGCAAGG BRADO5042 5233543 - 5232515 - | putative dihydrokaempferol 4-reductase (NAD-dependent epimerase/dehydratase) TERM 3547 5232985 - 5232957 - G 77 -5.8 -4.60041 | overlap 5232958 ATGGAGGGCGAAAAA TCCGGGCCCAGC ACCGG GCCGAGCACGGC GACCGGACAGATGGT BRADO5043 5235763 - 5233652 - | hypothetical protein TERM 3548 5233801 - 5233830 + g 72 -14.9 -2.78384 | TGCCGAAGCCGACCA CCGGCGGCTCGCT GGCC GGCGGGCCGCCGC TCTCCTGCCAGCGCA dksA 5236436 - 5236035 - | DnaK suppressor protein BRADO5046 5237240 - 5236629 - | putative NAD(P)-binding protein BRADO5047 5237176 - 5237319 + | hypothetical protein BRADO5048 5237385 - 5237759 + | MarR family transcriptional regulator TERM 3549 5237750 - 5237765 + T 80 -6 -4.77157 | opp_overlap 5237750, overlap 5237752 GCAGCAGCCATCGAA GGCCGC GTAA GCGGGC TTTTTCCTCGGTTGA fliX 5238212 - 5237799 - | flagellar assembly regulator FliX flgI 5238449 - 5239606 + | flagellar basal body P-ring protein BRADO5051 5239606 - 5240022 + | chemotactic signal-response protein CheL BRADO5052 5240071 - 5240556 + | hypothetical protein TERM 3550 5240655 - 5240631 - f 93 -18.5 -3.33261 | CCTGAACGTCGAGAA GCCGCGCCGCC CGG GGCCGCGCGGC TCGCGCCCGTTAACG BRADO5053 5240924 - 5241193 + | hypothetical protein TERM 3551 5241220 - 5241245 + T 100 -14.7 -4.96646 | gap 1, opp_overlap 5241214 5241217 5241216, overlap 5241202 5241201 GGCGGCAAACATCGA GCCGCC-CGGCG TTT TGCCGAGGCGGC TTTTTCGTTCTCTGA flaF 5241682 - 5241392 - | flagellar biosynthesis regulatory protein FlaF TERM 3552 5242107 - 5242074 - R 100 -24.7 -3.66654 | gap 1 CAGCGTAACTCCAAA CGCAGAAGCGGCGGGC CAT GCCCGCCGCTTC-GCG AAGATCCGATGGACG BRADO5055 5243708 - 5242134 - | putative flagellin protein, C-terminus TERM 3553 5243887 - 5243908 + r 100 -18.7 -3.73386 | opp_overlap 5243887, overlap 5243873 ACCAGGCGCAAAAAA GCGGCGGGG TTTC CCCCGCCGC TTTCGCTGCTTGTGT TERM 3554 5243908 - 5243887 - R 100 -18.7 -5.03715 | opp_overlap 5243873 5243887 ACCAGGCGCAAAAAA GCGGCGGGG TTTC CCCCGCCGC TTTCGCTGCTTGTGT BRADO5056 5245489 - 5243939 - | putative flagellin protein, C-terminus TERM 3555 5245537 - 5245511 - H 71 -5.2 -4.41348 | opp_overlap 5245536, overlap 5245512 5245513 CTGGTGTGAAACAAA CTGCCC-GATCC ATTCA GGATCAGGGC-G AAGCCCGCGGCTGAC TERM 3556 5245782 - 5245745 - H 70 -10 -3.54919 | AACCATGTTCGGAAA GGATTGCTGCGCGCT-GA CCGA TCGAGCGCGCAG-ACTCC CCGCAGGATCTCGAC TERM 3557 5246267 - 5246239 - g 77 -10.9 -3.78934 | overlap 5246236 5246219 CGCCTTCGAGAAGAA GCTGCTCGAGCAG GCC CAGGCCGAGCAGC AGGCTCAACAGATCG flbT 5245925 - 5246317 + | flagellar biosynthesis repressor FlbT TERM 3558 5246378 - 5246329 - T 100 -25.1 -3.14963 | opp_overlap 5246335, overlap 5246335 CTGAGAACGACGGAA TCAGAACGAGGAGCCCGGCTCTG AGCG CGGAGCCGGGCTCCGCGTTGTGA GCGAAAGACGCATCA TERM 3559 5246335 - 5246372 + T 100 -24.9 -3.28712 | opp_overlap 5246335 5246329 ACGACGGAATCAGAA CGAGGAGCCCGGCTCTG AGCG CGGAGCCGGGCTCCGCG TTGTGAGCGAAAGAC TERM 3560 5246372 - 5246335 - T 100 -22.7 -3.52919 | opp_overlap 5246335, overlap 5246329 ACGACGGAATCAGAA CGAGGAGCCCGGCTCTG AGCG CGGAGCCGGGCTCCGCG TTGTGAGCGAAAGAC TERM 3561 5246481 - 5246448 - T 81 -16.7 -2.71712 | opp_overlap 5246448 5246449, overlap 5246455 GCGCTGCCTGCAAAC GCGAAAACGGCGGGG TTGC CCCCGCCGCCTTCGA TTTTGATAGGCCGCC TERM 3562 5246448 - 5246481 + T 91 -12.3 -4.25104 | opp_overlap 5246448 5246455, overlap 5246449 GCGCTGCCTGCAAAC GCGAAAACGGCGGGG TTGC CCCCGCCGCCTTCGA TTTTGATAGGCCGCC TERM 3563 5246449 - 5246480 + T 83 -15.8 -3.14848 | opp_overlap 5246448 5246455, overlap 5246448 CGCTGCCTGCAAACG CGAAAACGGCGGGG TTGC CCCCGCCGCCTTCG ATTTTGATAGGCCGC TERM 3564 5246474 - 5246455 - T 100 -16.4 -4.24002 | opp_overlap 5246449 5246448, overlap 5246448 CTGCAAACGCGAAAA CGGCGGGG TTGC CCCCGCCG CCTTCGATTTTGATA BRADO5058 5248052 - 5246499 - | putative flagellin protein, C-terminus TERM 3565 5246849 - 5246874 + g 75 -6.9 -4.41494 | gap 1 TGTTGAAGGTCACGC CGGTGA-TCGAC AGC GTCGACTTGCCG TTTTCGTTGAACGTC TERM 3566 5248097 - 5248074 - R 84 -8.2 -4.41348 | gap 1 CTGGTGTGAAACAAA CCCTCGATCCC TTC GAGATC-AGGG TGAAGCCCAGGACGA BRADO5059 5249867 - 5248383 - | putative pyridoxal-dependent decarboxylase TERM 3567 5249099 - 5249140 + g 86 -18.1 -3.15544 | gap 1 CGCTGCGGCACAGCT CGG-CGACATCGGCGAGATC GTC GATGGCGCCGATGTCGACCG TTCCTGCCGATGCCA BRADO5060 5251084 - 5249894 - | hypothetical protein BRADO5061 5252753 - 5251137 - | hypothetical protein BRADO5062 5253567 - 5252764 - | hypothetical protein TERM 3568 5253229 - 5253241 + g 75 -4.8 -4.57569 | GGCGCGGCGCGCCTT GGTC CAGTT GACC TTTTTGACCGGATAG BRADO5063 5255531 - 5253660 - | putative flagellin and related hook-associated protein TERM 3569 5254513 - 5254548 + g 70 -8.9 -3.9461 | gap 1, opp_overlap 5254489 5254514, overlap 5254514 GCCGCGCCCGACAGC AG-CGTGGCGCCGGTG ATCGG CGCCGGCGTCGCGGCC TTGTTGTTGACCACC BRADO5064 5257410 - 5255545 - | putative flagellar hook-associated protein 1 (HAP1, FlgK protein) TERM 3570 5256588 - 5256625 + g 70 -10.5 -3.73534 | CGACGTCGAGCGAGA CGCCGTTGGACAGCTTG ATGT TGAGCTGCCCGACGCCG TTCTTGGTCGGATTG TERM 3571 5257172 - 5257198 + g 73 -14.5 -2.82623 | gap 1, overlap 5257169 ATCTGGTCGGCATAG GCTCCGC-CCGA GGTC TCGGTGCGGAGC TGGTTCTGCACGAAC BRADO5065 5259259 - 5257454 - | putative flagellar hook protein flgE msrB 5260062 - 5259559 - | methionine sulfoxide reductase B BRADO5067 5261584 - 5260157 - | putative FAD dependent oxidoreductase TERM 3572 5261028 - 5260987 - G 70 -12.9 -3.01712 | opp_overlap 5260986 5260991 5260993 GCGTGTCCTCGAAGA TCCGCGCGCCCGCACGG TGCGCGAG CCGCGCCAGCGCGTGGA CGTATTTGCGGCCGT TERM 3573 5261578 - 5261588 + g 75 -4.6 -4.63218 | CGCTTGTGAAAGTCT CGCT CAT GGCG TTTTCTTAGCGAACC BRADO5068 5261702 - 5262241 + | putative phosphoglycerate mutase family protein BRADO5069 5262295 - 5262720 + | putative universal stress protein (Usp) BRADO5070 5264242 - 5262884 - | putative transposase TERM 3574 5263433 - 5263477 + g 79 -4.8 -4.73388 | overlap 5263445 CCGCGCCTGCGGATC GGTGGTGGAGGCCCGAGGCT CCTTC GGCTTCTTGCCGTTACCGCC TTTTTCCTCGAGCTT TERM 3575 5264439 - 5264393 - R 90 -19.5 -2.72344 | gap 1, opp_overlap 5264401 5264403 GCGGATGGTGAAGCA GTGGGCA-CGCCATCGCGCGGC TTGC GCCGCACGATGTCTTTGCCCAC CCTACGGACTTCGAC TERM 3576 5264401 - 5264430 + r 81 -13.5 -3.53811 | opp_overlap 5264393, overlap 5264403 TGAAGCAGTGGGCAC GCCATCGCGCGGC TTGC GCCGCACGATGTC TTTGCCCACCCTACG TERM 3577 5264403 - 5264428 + r 82 -14.7 -3.34715 | opp_overlap 5264393, overlap 5264401 AAGCAGTGGGCACGC CATCGCGCGGC TTGC GCCGCACGATG TCTTTGCCCACCCTA BRADO5071 5265109 - 5264522 - | hypothetical protein BRADO5072 5265608 - 5265198 - | hypothetical protein BRADO5073 5265837 - 5266268 + | hypothetical protein TERM 3578 5266289 - 5266313 + T 100 -14.2 -4.52589 | opp_overlap 5266289 TTGCTGGCATGAAAA CGCCGCGCGG CAGAC CCACGCGGCG TTTTGTCTCAGGCGA TERM 3579 5266313 - 5266289 - T 100 -16.4 -4.25104 | opp_overlap 5266289 TTGCTGGCATGAAAA CGCCGCGCGG CAGAC CCACGCGGCG TTTTGTCTCAGGCGA BRADO5074 5266846 - 5266340 - | hypothetical protein TERM 3580 5267444 - 5267468 + G 70 -9.9 -3.67342 | CGCGGCGTTGTGTGT GGTCGGCGCGT TCT GCACGCTGACC TTCTATGATTATTTT BRADO5076 5267241 - 5268332 + | hypothetical protein BRADO5077 5268411 - 5270390 + | putative signal peptide TERM 3581 5270741 - 5270755 + T 78 -3.6 -5.0133 | overlap 5270717 CCAGCCCTGCCGAGC GAAATT TTC AGTTTC TTTTTTACAGAAATC TERM 3582 5271185 - 5271164 - T 84 -8.7 -4.50976 | gap 1, overlap 5271166 TCTCACATGACAAAA CTCG-GACGC CAT GCGCCGCGAG ATCGCGACACCATGT BRADO5078 5271891 - 5271265 - | putative signal peptide BRADO5079 5273085 - 5272057 - | putative thioredoxin reductase, FAD/NAD(P)-binding TERM 3583 5273195 - 5273181 - H 84 -8.5 -4.47551 | AGGGAAGGCACAAAA GCCGC TCTCC GCGGC GCCCGCCGCTTGCAG BRADO5080 5273262 - 5273726 + | putative thioesterase fdxB 5274101 - 5273781 - | 2Fe-2S ferredoxin (FdII) BRADO5082 5274529 - 5274185 - | hypothetical protein TERM 3584 5274975 - 5274965 - g 79 -6.8 -4.62302 | GAACACCCCCAAAAA GGTC AAA GACC CGACTGAAGTTGCGC BRADO5083 5274945 - 5280707 + | putative methyl-accepting chemotaxis protein TERM 3585 5280764 - 5280795 + T 83 -14.4 -3.53091 | opp_overlap 5280766, overlap 5280765 AATCAGCGATCGACA AACGAACGGAGGCC GCAA GGCCTCCGTTCGCG TTTGAGGGGAGGAAT TERM 3586 5280765 - 5280794 + T 86 -17.9 -2.71712 | opp_overlap 5280766, overlap 5280764 ATCAGCGATCGACAA ACGAACGGAGGCC GCAA GGCCTCCGTTCGC GTTTGAGGGGAGGAA TERM 3587 5280793 - 5280766 - T 100 -21.4 -3.92869 | opp_overlap 5280765 5280764 TCAGCGATCGACAAA CGAACGGAGGCC GCAA GGCCTCCGTTCG CGTTTGAGGGGAGGA BRADO5084 5282150 - 5281269 - | ABC transporter periplasmic-binding protein BRADO5085 5283070 - 5282300 - | putative ABC transporter ATP-binding protein BRADO5086 5284210 - 5283077 - | putative ABC transporter (permease protein) BRADO5087 5284369 - 5285364 + | mandelate racemase/muconate lactonizing family protein BRADO5088 5286533 - 5285346 - | major facilitator superfamily 3-phenylpropionic acid transporter permease TERM 3588 5285915 - 5285893 - G 71 -9 -3.85092 | ATGATGCACAGGAAA CGCGGACTGC CGA GCAGGCTGCG GCCATCCTGCGCCGG TERM 3589 5286436 - 5286420 - G 79 -2.2 -5.07567 | CCACACGGGAAAAAA CGGG AGATGCGTG CCCG ACAGCGCGAAGACGG TERM 3590 5286979 - 5286960 - g 70 -6.4 -4.25104 | CGCGCTGGAGGAAAA CCTCACAC CGGT GCGTAAGG GCACCCGGATCATCA BRADO5089 5286619 - 5288157 + | hypothetical protein TERM 3591 5289939 - 5289974 + G 83 -8.2 -4.57569 | gap 1 GCCCGGCGCACCGCA CTTCGCGCAATCCGGAC CGC GTCCGGGAGGCG-GAGG TTTTTCGCGGGGTGG BRADO5090 5288296 - 5290005 + | hypothetical protein BRADO5091 5291002 - 5290013 - | putative threonine dehydratase TERM 3592 5290443 - 5290428 - G 70 -10.4 -3.72695 | ACGCCTGCGAGCAAA CCGCCT CCCG AGGCGG GAACGATGACGACAT TERM 3593 5290558 - 5290601 + g 70 -13 -3.04144 | AGGGCGGCACCACGG TCGAGCCGCGCTTGCCGGCG ATCT CGCGGGCAATCGCCTCTCGG TCTTCACGGTCGCGA TERM 3594 5290771 - 5290760 - G 73 -3.6 -4.63486 | ATTGCCCGAAGAAAA GGCG ACGA CACC ATTCGCCCGCGACGA BRADO5092 5291820 - 5291059 - | putative UDP-2,3-diacylglucosamine hydrolase ttuE 5293481 - 5292063 - | pyruvate kinase ttuC 5294710 - 5293637 - | tartrate dehydrogenase/decarboxylase BRADO5095 5294910 - 5295827 + | tartrate utilization transcriptional regulator glgX 5298317 - 5296083 - | glycosyl hydrolase (glycogen debranching enzyme) BRADO5097 5298633 - 5298352 - | hypothetical protein TERM 3595 5299188 - 5299206 + r 91 -3.2 -5.41143 | GAACCATAAATTCTG AAAAATAG CAA CTATTTTA TTTTTTTACGGAATC BRADO5098 5299741 - 5299484 - | putative signal peptide BRADO5099 5299978 - 5300433 + | hypothetical protein BRADO5100 5301895 - 5300477 - | putative two-component sensor histidine kinase BRADO5101 5302557 - 5301892 - | putative two-component transcriptional regulator BRADO5102 5302863 - 5302558 - | putative signal peptide TERM 3596 5302677 - 5302645 - G 70 -10.6 -3.62096 | gap 1, overlap 5302646 5302649 GCCGATCACCCGAAA CTCATAGCGCCAGCG GCCG CGCTGGCGCT-CGAT GTCGATGCCTGTCAC TERM 3597 5302674 - 5302649 - G 71 -14.7 -2.65532 | overlap 5302646 5302645 ATCACCCGAAACTCA TAGCGCCAGCG GCCG CGCTGGCGCTC GATGTCGATGCCTGT BRADO5103 5302876 - 5303067 + | hypothetical protein BRADO5104 5303296 - 5303403 + | hypothetical protein BRADO5105 5304126 - 5303428 - | putative transport transmembrane protein (aquaporin-like) TERM 3598 5303854 - 5303807 - G 71 -14.4 -2.91728 | gap 4, overlap 5303802 AGCGCGAACATCAGA TG-CGCCG-TCATGGT-GCCGGCG ATTC CGCCGGCGACC-TGAGCGGCGACA TAGGCCGCCGCCTCC BRADO5106 5304650 - 5304123 - | putative arsenate reductase; arsC-like protein BRADO5107 5304978 - 5304643 - | ArsR family transcriptional regulator BRADO5108 5305167 - 5305484 + | ArsR family transcriptional regulator TERM 3599 5306255 - 5306312 + G 73 -10.7 -3.74693 | opp_overlap 5306238 5306249, overlap 5306253 CGGCGAAATCGTTCG GCGGCGGCAGCGCCG-ACC-AGCTCGCCG CGCG CGGTGAGCTCGGCATGGC-CT-TCGCCGC TTTGGTGCGCTCGGG BRADO5109 5305534 - 5306898 + | putative pyridine nucleotide-disulphide oxidoreductase family protein TERM 3600 5307678 - 5307699 + G 82 -17.3 -3.01791 | GGCATGATGATCGGC CCCGCGCAG GTCG CTGCGCGGG TGTTCGAGGCGGGCT TERM 3601 5307859 - 5307885 + G 86 -18 -3.01712 | ACGGCATCCTGACCA TCGCGCGCGGCA CGC TGCCGCTCGCGA TCTTCGGCCCCGCCA BRADO5110 5306928 - 5308118 + | major facilitator superfamily permease TERM 3602 5309192 - 5309181 - g 77 -7.2 -4.56597 | GCGCGCTGGGAAAAA CCGG ACGG CCGG CTGATCCAGCCGATG BRADO5111 5308230 - 5309861 + | hypothetical protein BRADO5112 5310299 - 5309871 - | putative signal peptide BRADO5113 5310466 - 5311122 + | TetR family transcriptional regulator BRADO5114 5312132 - 5311419 - | GntR family transcriptional regulator TERM 3603 5311804 - 5311818 + g 71 -12.8 -3.21912 | AGCTGCTCCTCCCAT GGCGGC GTC GCCGCC TTCATCGATTCGCGC TERM 3604 5312257 - 5312231 - H 73 -2.9 -4.67982 | gap 1, overlap 5312235 5312238 TTTTATGTAATAAAA GGAACGAGCCGG CTCG CCGGC-CATCGC ACAAGAACATCGCGC BRADO5115 5312306 - 5313199 + | putative metapyrocatechase (MPC) (CatO2ase) (catechol 2,3-dioxygenase) BRADO5116 5313223 - 5314743 + | putative FAD-binding monooxygenase; putative 3-(3-hydroxy-phenyl)propionate hydroxylase TERM 3605 5315817 - 5315835 + G 71 -13.8 -2.83894 | overlap 5315802 TCGGCGCGATCGCTC CGGCCGTG CAG CGCGGCCG TCTGATCGTCGTGAT BRADO5117 5314772 - 5316091 + | major facilitator superfamily permease BRADO5118 5316106 - 5316957 + | putative bifunctional enzyme with isomerase/decarboxylase activity TERM 3606 5317097 - 5317112 + T 72 -3.9 -4.56775 | overlap 5317087 5317095 CGGATGCCGCTATCG GCGGC TATGAT GCTGC TTTTTGACAGGCGAT BRADO5119 5318459 - 5317101 - | putative transposase TERM 3607 5317650 - 5317694 + g 74 -2.6 -4.73388 | overlap 5317661 5317662 CCGCGCCTGCGGATC GGTGGTGGAGGCCCGAGGCT CCTTC GGCTTCTTGCCGTTGCCGCC TTTTTCCTCGAGCTT TERM 3608 5318837 - 5318878 + r 95 -16.5 -3.85698 | gap 1, opp_overlap 5318831 5318829 5318851, overlap 5318838 5318863 CGACTAATATCCATA GGGTGGGCAGAGCAGCCGCC GGA GGCGGCAGCG-TGCCCACCG TTTATCAGCGAGCAC TERM 3609 5318838 - 5318877 + r 93 -20 -2.91276 | gap 1, opp_overlap 5318831 5318829 5318851, overlap 5318837 5318863 GACTAATATCCATAG GGTGGGCAGAGCAGCCGCC GGA GGCGGCAGCG-TGCCCACC GTTTATCAGCGAGCA TERM 3610 5318863 - 5318919 + r 73 -10.7 -3.59979 | opp_overlap 5318851 5318831 5318829 5318895, overlap 5318838 5318837 GCAGCCGCCGGAGGC GGCAGCGTGCCCACCGTTTATCAGC GAGCACA GCGGCCAGATGGTGGGCACGGCGCC TTTGCGATCGGAAGC BRADO5120 5320562 - 5318982 - | putative multidrug resistance protein, emrB-like TERM 3611 5320337 - 5320315 - G 72 -6.8 -4.28111 | CACATGATGAAGAAA GCCTTGCGGC CGA ACCGCTTGGC CAGATAGCTCGACGC BRADO5121 5321847 - 5320576 - | HlyD family multidrug resistance protein TERM 3612 5321593 - 5321562 - G 73 -13 -3.24232 | gap 1, overlap 5321560 5321558 5321566 CGGCGTCGAAATAGA CATAGCCGCCGGCGG CGG CCGCCAGCAGC-ACG ACGAGACCGACCGCT TERM 3613 5321590 - 5321566 - G 84 -17.1 -3.15257 | overlap 5321562 5321560 5321558 GTCGAAATAGACATA GCCGCCGGCGG CGG CCGCCAGCAGC ACGACGAGACCGACC BRADO5122 5322699 - 5322010 - | hypothetical protein BRADO5123 5324128 - 5322719 - | putative signal peptide BRADO5124 5325023 - 5324133 - | putative glyoxalase/Bleomycin resistance protein/dihydroxybiphenyl dioxygenase superfamily protein BRADO5125 5325475 - 5325050 - | hypothetical protein BRADO5126 5327352 - 5325475 - | putative metallo-dependent hydrolase BRADO5127 5327636 - 5327349 - | hypothetical protein BRADO5128 5328295 - 5327645 - | putative isochorismatase family protein BRADO5129 5328838 - 5328326 - | hypothetical protein BRADO5130 5329672 - 5328848 - | non-heme haloperoxidase BRADO5131 5329823 - 5330872 + | AraC/XylS family transcription factor TERM 3614 5330859 - 5330886 + T 84 -17 -2.71011 | gap 1, opp_overlap 5330842 GGGAGACCGTGCTCG CGCGCGGCAGCTG AGC CGGC-GCCGCGCG TCGTTGCAGACGGCT BRADO5132 5331359 - 5330901 - | putative signal peptide thiD 5332275 - 5331475 - | bifunctional: hydroxy-methylpyrimidine kinase (HMP kinase); hydroxy-phosphomethylpyrimidine kinase (HMP-P kinase) BRADO5134 5332397 - 5332642 + | putative transcriptional regulator TERM 3615 5332704 - 5332679 - f 100 -19.7 -4.05446 | CGCCCGAATGAGAAA GGCGCCCGCCG TGAC CGACGGGCGCC GAAATCCTCAAAAGG BRADO5135 5332994 - 5334055 + | AraC/XylS family transcriptional regulator BRADO5136 5336522 - 5334009 - | signaling protein BRADO5137 5336758 - 5337918 + | putative extracellular ligand-binding receptor cycG 5338882 - 5337968 - | diheme cytochrome c-type TERM 3616 5339004 - 5338973 - R 100 -19.4 -4.55295 | overlap 5338974 CGCCGGACAAACAAA CGGGGGCGAACGCG TGGC CGCGTCCGCCCCCT CAAACTTGCGTCAGA TERM 3617 5339003 - 5338974 - R 100 -22.9 -3.32695 | overlap 5338973 GCCGGACAAACAAAC GGGGGCGAACGCG TGGC CGCGTCCGCCCCC TCAAACTTGCGTCAG cycF 5339475 - 5339020 - | cytochrome c, class II BRADO5140 5341912 - 5339603 - | putative aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding protein TERM 3618 5340971 - 5340932 - G 77 -13.6 -3.55761 | gap 1 GATGTAGGGCGCAAA CGTCGA-CAGATAGGCGCC CAT GTCGCCCATCAGGTCGACG TCCATCGCGAGGAAC TERM 3619 5341160 - 5341142 - G 73 -11 -3.64703 | TTCCCGGTACGGAAA CAGCTTCG TGC CGAAGCCG CCGCCGACATCCGGG BRADO5142 5343083 - 5342118 - | hypothetical protein TERM 3620 5342422 - 5342455 + g 73 -13.9 -3.14051 | gap 1, overlap 5342420 TCGGCGATATCGGCG CTGGCCGCGA-TCAGA CGG TCTGGCTCGCGGCCCG TATTGGTGAGCGTGA TERM 3621 5342498 - 5342475 - G 77 -10.9 -3.87815 | GGTGAGCGTGATAAA GCCGGCGCC GACCTT GGCGCCGCC CGGCGTCGCGCGGCT BRADO5143 5345353 - 5343143 - | putative TonB-dependent receptor protein TERM 3622 5343463 - 5343436 - G 83 -9.1 -4.3739 | gap 1, overlap 5343454 GATGCTTGTACAAAA GCTCCGCGCGCA GGAAA TGCG-GCGGCGC GCCCGGTAGCCGGTT TERM 3623 5345041 - 5345076 + g 77 -11.1 -3.76373 | gap 1, overlap 5345032 CCGGCACGACGGCGA CCGCG-CCCGGCGTCT GCTGG ATGCGCTGGGTCGCGG TTTGCGTGTTGGGGG BRADO5144 5345778 - 5345395 - | hypothetical protein BRADO5145 5347419 - 5345890 - | putative virulence factor MviN-like protein TERM 3624 5346665 - 5346696 + g 74 -15.2 -3.06183 | opp_overlap 5346664 CCGGCGGGCAGGAAC GTCGCGATGATCGT GTCG GCGAACATCGCGAC TTGCGTGCCCATCGA BRADO5146 5347840 - 5348112 + | hypothetical protein TERM 3625 5348291 - 5348269 - T 77 -12.6 -3.53811 | CGTAGGGTGGGCAAA GCAGCCGCCC GCA GGGCGGTCGC GTGCCCACCGCGCAT TERM 3626 5348439 - 5348487 + T 76 -13.9 -3.14931 | gap 2, opp_overlap 5348449 CACCCACCGCCGTCA TCCCGGA-CA-AGCCTGCCGACG CGAAC CGGCGGCGGGCGCTGATCCGGGA TTCATACGCCGTGGC BRADO5147 5349829 - 5348681 - | putative aminotransferase; DegT/DnrJ/EryC1/StrS family protein TERM 3627 5349522 - 5349508 - G 72 -7 -4.26076 | overlap 5349510 5349511 GCACGTCGACGAAAA CAGGCG TGG CGCCGG TCAGCGCGACGGACT BRADO5148 5350879 - 5349878 - | NAD(P)-dependent oxidoreductase TERM 3628 5350403 - 5350442 + g 75 -11.4 -3.71848 | gap 1 GAACGGGCCGACGCG GGTGATCGCGATCGAGAGG ATG TC-CTCGCCCGCGATCGCC TTCTTGATCGCGGCG BRADO5149 5351224 - 5351937 + | putative signal peptide BRADO5150 5354164 - 5351945 - | O-linked N-acetylglucosamine transferase BRADO5151 5356484 - 5354265 - | O-linked N-acetylglucosamine transferase TERM 3629 5356145 - 5356170 + g 73 -13.9 -3.21099 | CGATGGCGCGCTCCT GCGCGGCGCGG GCCT CCGCGTAGCGC TTCATGCTGAACAGG TERM 3630 5356400 - 5356428 + g 84 -13.1 -4.02817 | overlap 5356401 5356406 AGGCCTCGACAGCCT TCGGCAGCAGGCC ATC GGCCTGCTTTCGG TTCTTCTTCTGCAGG TERM 3631 5356401 - 5356427 + g 72 -14.4 -3.01208 | overlap 5356400 5356406 GGCCTCGACAGCCTT CGGCAGCAGGCC ATC GGCCTGCTTTCG GTTCTTCTTCTGCAG TERM 3632 5356406 - 5356422 + g 83 -13.7 -3.89182 | overlap 5356401 5356400 CGACAGCCTTCGGCA GCAGGCC ATC GGCCTGC TTTCGGTTCTTCTTC manC 5357966 - 5356554 - | mannose-1-phosphate guanyltransferase; putative capsular polysaccharide biosynthesis protein BRADO5153 5358995 - 5357979 - | nucleotide sugar epimerase; putative capsular polysaccharide biosynthesis protein BRADO5154 5360319 - 5359006 - | UDP-glucose/GDP-mannose dehydrogenase family protein TERM 3633 5360500 - 5360511 + H 82 -5.8 -4.94972 | opp_overlap 5360487 GAGCGAAGCCGACCT CGCA TGCG TGCG TTTTTGATTCTCCTC TERM 3634 5360968 - 5361000 + G 77 -9.8 -3.99324 | gap 1 CTGGCCTTGGTGCTG GTCGATGCC-GCGGC GCTG GCGGCCGGCGTCGGC TTTCTCGTCATGGGC BRADO5155 5360503 - 5361465 + | hypothetical protein BRADO5156 5363442 - 5361472 - | putative asparagine synthetase TERM 3635 5362624 - 5362609 - G 72 -8.2 -4.03234 | overlap 5362593 TCCGCCGGAGAGAAA CGCGCC GAGC GGCACG TCCGAAAGGCACTGC BRADO5157 5363746 - 5365779 + | putative acyltransferase, group 3; putative O-antigen acetylase BRADO5158 5365776 - 5367578 + | hypothetical protein BRADO5159 5367811 - 5369865 + | putative acyltransferase, group 3; putative O-antigen acetylase TERM 3636 5369868 - 5369893 + T 95 -10.3 -4.55697 | opp_overlap 5369868 5369870, overlap 5369869 5369870 GAGCCCGCGTTAGAA GACGTCCCGGC TCCG GCCGGGACGAA TTTATTTCTGAGGGT TERM 3637 5369869 - 5369892 + T 77 -13.8 -3.32695 | opp_overlap 5369868 5369870, overlap 5369868 5369870 AGCCCGCGTTAGAAG ACGTCCCGGC TCCG GCCGGGACGA ATTTATTTCTGAGGG TERM 3638 5369870 - 5369891 + T 83 -17.3 -2.59135 | opp_overlap 5369870 5369868, overlap 5369869 5369868 GCCCGCGTTAGAAGA CGTCCCGGC TCCG GCCGGGACG AATTTATTTCTGAGG TERM 3639 5369891 - 5369870 - T 89 -17.3 -3.21276 | opp_overlap 5369869 5369868 5369870, overlap 5369868 GCCCGCGTTAGAAGA CGTCCCGGC TCCG GCCGGGACG AATTTATTTCTGAGG BRADO5160 5371027 - 5369975 - | hypothetical protein TERM 3640 5371441 - 5371463 + G 100 -9.8 -4.77165 | overlap 5371443 5371455 TTCATCTTCCTGTTC TTGCCGGTGA CCT TCGCCGGCTA TTTTCTTATCGGGCG TERM 3641 5371443 - 5371461 + G 82 -12.4 -4.00512 | overlap 5371441 5371455 CATCTTCCTGTTCTT GCCGGTGA CCT TCGCCGGC TATTTTCTTATCGGG TERM 3642 5372866 - 5372889 + G 74 -8 -4.27886 | GCGCTGCTCGTGAGC CTGCTCGCCG GCGA CGGAGCGCAG TTTCTCTATTTCCAG BRADO5161 5371405 - 5372910 + | putative membrane bound O-acyl transferase (MBOAT) family protein; putative alginate O-acetyltransferase BRADO5162 5372929 - 5374059 + | hypothetical protein BRADO5164 5374471 - 5375973 + | putative bifunctional enzyme (sugar kinase/cytidylyltransferase) BRADO5165 5375995 - 5376717 + | putative sugar-phosphate nucleotidyl transferase BRADO5166 5376813 - 5377751 + | putative sugar-nucleotide epimerase/dehydratase BRADO5167 5377724 - 5378356 + | putative phosphoheptose isomerase (sedoheptulose 7-phosphate isomerase) BRADO5168 5378369 - 5379367 + | putative dTDP-glucose 4,6-dehydratase BRADO5169 5379410 - 5380258 + | putative transketolase N-terminal section (TK) BRADO5170 5380255 - 5381178 + | putative transketolase, C-terminal section (TK) BRADO5171 5381187 - 5382224 + | putative alcohol dehydrogenase (Zinc-binding) BRADO5172 5382234 - 5382848 + | hypothetical protein BRADO5173 5382835 - 5383878 + | aminoglycoside phosphotransferase family protein BRADO5174 5383906 - 5384568 + | putative S-adenosyl-L-methionine (SAM)-dependent methyltransferase TERM 3643 5385832 - 5385863 + G 81 -3.7 -5.00616 | gap 2, opp_overlap 5385827 5385858 GGGAATAGAATCGCG CTGGCC--GTCGATG ACGA CAGCGACAAGGCCGG TTTTTTCCCGCCGGG BRADO5175 5384860 - 5386071 + | putative S-adenosyl-L-methionine (SAM)-dependent methyltransferase TERM 3644 5386378 - 5386394 + G 80 -15.1 -3.4072 | TGGAGCTTGGCCCCC CGGGCGG CGC CCGCCCG TTCTACTACCGGATG BRADO5176 5386101 - 5386604 + | hypothetical protein TERM 3645 5386941 - 5386973 + G 70 -10.6 -3.54459 | gap 2, overlap 5386941 5386944 5386956 GCCATTTCGCAGAGG CTG-GC-GACCGCGCC ATC GGCGTGGTCAGCTCGG TTTACGCCGAATTCG BRADO5178 5386601 - 5387341 + | putative short-chain dehydrogenase/reductase family protein TERM 3646 5388605 - 5388615 + G 70 -8.2 -3.96624 | opp_overlap 5388591 AGGCCTATCTGGAAG CCGG CGG CCGG TTTCTGGTGCCGCTG BRADO5179 5387410 - 5388675 + | putative S-adenosyl-L-methionine (SAM)-dependent methyltransferase TERM 3647 5389041 - 5389055 + G 71 -9.2 -3.85698 | GCCCTGATCATGGGT GCGGTC GCC GGCCGC TTTCTCGGCGCCGAC BRADO5180 5388822 - 5389664 + | putative O-antigene/LPS export system permease protein BRADO5181 5389701 - 5390450 + | putative O-antigen/LPS export system ATP-binding protein TERM 3648 5390841 - 5390815 - g 81 -10.8 -4.11692 | opp_overlap 5390824, overlap 5390820 GACCTATCTGCAAAA GACCATGGCGCA GGC CGCGCGATGGCC CGACGCCGGCCTGCT TERM 3649 5390824 - 5390855 + G 72 -14.4 -3.07043 | gap 1, opp_overlap 5390815 5390820 GCAAAAGACCATGGC GCAGGCCGCGCGATG GCC CGACGC-CGGCCTGC TGTTCGCATGCTGCG BRADO5182 5390492 - 5391550 + | putative glycosyl transferase, group 2 BRADO5183 5391625 - 5393685 + | hypothetical protein TERM 3650 5393919 - 5393903 - f 85 -10.1 -4.2828 | CTGTATGGAGGAAAA CGGCCCA CGG TGAGCCG CAGAGATAGCCGAGG BRADO5185 5394129 - 5396510 + | hypothetical protein BRADO5186 5396660 - 5397157 + | putative acetyltransferase; trimeric LpxA-like enzyme TERM 3651 5397810 - 5397820 + G 77 -6.8 -4.46212 | GCATCGGCGATCTAG GCTG CTT CAGC TTTTATCCTGGAAAG BRADO5187 5397209 - 5398372 + | DegT/DnrJ/EryC1/StrS aminotransferase family protein BRADO5188 5398391 - 5399212 + | putative sulfotransferase protein BRADO5189 5399285 - 5400304 + | NAD(P)-dependent oxidoreductase TERM 3652 5401120 - 5401171 + G 100 -22.5 -3.05384 | gap 2, opp_overlap 5401075, overlap 5401123 CACATCTCAGGCCGA CCGGGCGACGTGCGCGTACTGAGCG CCGA CG-TCAGT-CGCGCACGTCGCCTGC TTGGCTACCGGGCAG TERM 3653 5401123 - 5401168 + G 100 -25 -2.75064 | gap 2, overlap 5401120 ATCTCAGGCCGACCG GGCGACGTGCGCGTACTGAGCG CCGA CG-TCAGT-CGCGCACGTCGCC TGCTTGGCTACCGGG BRADO5190 5400301 - 5401320 + | putative NAD dependent epimerase/dehydratase family protein BRADO5191 5401317 - 5402444 + | putative DegT/DnrJ/EryC1/StrS aminotransferase family protein BRADO5192 5402486 - 5403418 + | sulfate adenylyltransferase subunit 2 TERM 3654 5404411 - 5404436 + G 81 -14.7 -3.49102 | opp_overlap 5404377 ATCATCTGGATGAGC GACCGGCCACT GATC AGCGGCCGGTC TTATCTCGCCCGTAT BRADO5193 5403418 - 5405280 + | putative CysN/CysC bifunctional enzyme: Sulfate adenylyltransferase (SAT) subunit 1 (N-terminal); adenylyl-sulfate kinase (APS kinase)(C-terminal) BRADO5194 5406043 - 5405300 - | hypothetical protein BRADO5195 5407187 - 5406054 - | hypothetical protein BRADO5196 5407887 - 5407171 - | putative glycosyl transferase TERM 3655 5407823 - 5407807 - G 73 -3.6 -4.57569 | opp_overlap 5407818, overlap 5407818 CCATTCGGCGAAAAA CCGCAG AACAA CTTCGG GCGGATCTTGTAGAT BRADO5197 5408367 - 5409524 + | putative glycosyl transferase, group 1 TERM 3656 5409685 - 5409658 - g 73 -13.4 -3.28712 | GCGCTCGTCGCACAA GATTCCGACGCC GCAG GGCGCCGGCATC GCGGTCGTGGGCGCG TERM 3657 5409694 - 5409749 + G 75 -11.7 -3.71607 | overlap 5409694 5409743 CGGCATCGCGGTCGT G-GGCGCGACGCTGGTGGTCGGCGGCG CCTT CGCCTCCGTGC-TCGGCTTCGCGCCGC TTTCGATGCTGTTCA BRADO5198 5409521 - 5410522 + | putative glycosyl transferase, group 4; putative undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase BRADO5199 5412440 - 5410527 - | putative polysaccharide biosynthesis protein (capD-like) BRADO5200 5413720 - 5412437 - | putative O-antigen ligase (RfaL-like) rfaE 5415189 - 5413717 - | bifunctional protein RfaE (involved in ADP-L-glycero-D-manno-heptose synthesis); putative kinase (N-terminal); putative sugar nucleotide transferase (C-terminal) rfaD 5416207 - 5415227 - | ADP-L-glycero-D-mannoheptose-6-epimerase rfaF 5416356 - 5417420 + | ADP-heptose--LPS heptosyltransferase II gmhA 5417478 - 5418074 + | phosphoheptose isomerase (sedoheptulose 7-phosphate isomerase) BRADO5205 5418075 - 5418602 + | putative histidinol-phosphatase lpcC 5419630 - 5418584 - | lipopolysaccharide core biosynthesis mannosyltransferase galE 5419762 - 5420775 + | UDP-glucose 4-epimerase BRADO5208 5420879 - 5422684 + | ABC transporter permease/ATP-binding protein BRADO5209 5422709 - 5423410 + | putative fumarylacetoacetate hydrolase family protein TERM 3658 5423462 - 5423446 - T 100 -15.1 -4.63527 | opp_overlap 5423446 CTAGCACTCCAAAAA GCCGCGC CCT GCGCGGC TTTTTCTTCGCCGTC TERM 3659 5423446 - 5423462 + T 100 -15.1 -5.07486 | opp_overlap 5423446 CTAGCACTCCAAAAA GCCGCGC CCT GCGCGGC TTTTTCTTCGCCGTC BRADO5210 5425461 - 5424235 - | putative Reverse transcriptase BRADO5211 5426725 - 5426282 - | hypothetical protein TERM 3660 5426468 - 5426443 - G 79 -16.3 -3.06796 | opp_overlap 5426461, overlap 5426445 GCCGACCTGATGGAA TATGCCGCACA ACAC TGTGCGGCATA AGCCAATGCCCGCTG TERM 3661 5426466 - 5426445 - G 76 -14.5 -3.09327 | opp_overlap 5426461, overlap 5426443 CGACCTGATGGAATA TGCCGCACA ACAC TGTGCGGCA TAAGCCAATGCCCGC TERM 3662 5426705 - 5426747 + g 84 -17.1 -3.09516 | opp_overlap 5426732 5426735 5426736, overlap 5426685 5426728 GCGGACGAGCCGAAG GCGTAATCCGCCGCGTTTC ATGAC GAAGAACGGCGGATTACGC TTCGCTAATCCGCCC TERM 3663 5426728 - 5426769 + r 95 -10.9 -4.56597 | gap 1, opp_overlap 5426732 5426735 5426736, overlap 5426705 CGCCGCGTTTCATGA CGAAGAACGGCGGATTACGC TTC GC-TAATCCGCCCTCCTCCG TTTTTCACCGAAACG TERM 3664 5426762 - 5426735 - R 71 -9.2 -3.75024 | gap 1, opp_overlap 5426705 5426728, overlap 5426732 5426736 TTTCATGACGAAGAA CGGCGGATTA-CG CTT CGCTAATCCGCCC TCCTCCGTTTTTCAC TERM 3665 5426761 - 5426736 - R 70 -12.7 -2.84693 | gap 1, opp_overlap 5426705 5426728, overlap 5426735 5426732 TTCATGACGAAGAAC GGCGGATTA-CG CTT CGCTAATCCGCC CTCCTCCGTTTTTCA BRADO5212 5427901 - 5426798 - | putative cyclase BRADO5213 5428017 - 5429090 + | putative cobalamin synthesis protein/P47K family protein TERM 3666 5429739 - 5429706 - T 71 -13.1 -3.07043 | overlap 5429738 CGGATTAGCCGAAGA CGTCATCCGCCGCGG TTCA CCCCGACGAACGACG GATTACGCTTCGCTC TERM 3667 5429820 - 5429780 - T 73 -11.2 -3.64703 | gap 1, opp_overlap 5429792 5429795 5429797 CTCTGCTCACCGAAA CGCCGA-GACCACGATCGC GCCG ACGATCGCGACCGTCAGCG TGTACTTTGCCGCGT BRADO5215 5430700 - 5429771 - | putative aspartyl/asparaginyl beta-hydroxylase TERM 3668 5429926 - 5429885 - G 70 -10.9 -3.59979 | gap 1 TGTCGCCAGGTGAAA CTCGTACAGCTTGCCGAACA CCT TGTTCAGCACGCCG-ACGTG CTCGCCCTCGACGTT BRADO5216 5431250 - 5431095 - | hypothetical protein BRADO5217 5432126 - 5431431 - | hypothetical protein TERM 3669 5433049 - 5433007 - g 78 -14.2 -3.56092 | gap 2 TCAGCAGTTCCGAAA GCCAGCAGCCG-GCG-CCGG TCGCG CCGGTCGCTCAGCTGCCGAC CGTCGAGGTGCTGGT BRADO5218 5432925 - 5433734 + | putative pilus assembly protein cpaB TERM 3670 5433809 - 5433780 - g 91 -9.2 -4.71482 | ATCAAAGCGGAAAAA TGGGGACGGCGC TGATGC GCGCCCTCGCCA TGTCGGCGGCCATCG TERM 3671 5435187 - 5435146 - g 73 -13.9 -3.14132 | gap 3, opp_overlap 5435171 GCTCGGCCGCATGAA CCGGCTCTACGGCGTCG-CC GCCAA GGTCGACGCCGT-GA-CCGG ACAGCCGGCCGGCTT BRADO5219 5433743 - 5435221 + | putative pilus assembly protein cpaC BRADO5220 5435218 - 5435988 + | putative pilus assembly protein cpaD BRADO5221 5435985 - 5437253 + | putative pilus assembly protein cpaE TERM 3672 5437253 - 5437280 + T 78 -9.8 -4.08064 | opp_overlap 5437253 5437251, overlap 5437242 GCTCGGCGCGAAATA GCGCTCAGTCGT CGGA GCGGCTCAGCGC TTTTGCCAGCGCCTT BRADO5222 5438126 - 5437257 - | hypothetical protein TERM 3673 5437319 - 5437371 + g 86 -18.3 -3.16564 | GGCCCGCGACGGGCC GGTCCTGCCGCGGCGACAGCTCGCG CTG CGCGACCTGCCGGCGCACCAGGATC TTCCTCACATAGGCG BRADO5223 5438490 - 5438248 - | hypothetical protein BRADO5224 5440540 - 5438612 - | phenol 2-monooxygenase TERM 3674 5438795 - 5438759 - G 74 -12.4 -3.59979 | gap 1, opp_overlap 5438759 GCCGCGCATCGCAAA GATGTCCTGC-CCGCTC TTCA GATCGGAGCAGAACATC TTCTCGTAATCGACG TERM 3675 5440423 - 5440377 - G 78 -10.1 -4.08767 | overlap 5440378 GTGATGTCCGGAAAA GCCGACAGCTGGGCCG-CGAGAT TCA ATCCCGCCGGGCC-GCAGCCGAC GATGAGGACGTCGAC BRADO5226 5440642 - 5441094 + | MarR family transcriptional regulator BRADO5227 5442777 - 5441320 - | putative flavin-containing monooxygenase BRADO5228 5442987 - 5443649 + | hypothetical protein BRADO5229 5443797 - 5444528 + | putative alanyl-tRNA synthetase related protein TERM 3676 5444557 - 5444603 + T 72 -13.8 -2.82516 | gap 1, overlap 5444552 GCCCGGATGAGCGCA GCGACATCCGGGGTC-TCACG CGCTCT CTCGATGATCCCGGATGTCGC TGTGCTCATCCGGGC BRADO5230 5445126 - 5444635 - | hypothetical protein TERM 3677 5445225 - 5445195 - H 73 -11.1 -3.65827 | gap 1, opp_overlap 5445200 CAAGTCGCAGGCAAA CGTGCCCGGCCCGA CGGA TCAGGCCGGGT-CG GTAATTCGGCGGCAG BRADO5232 5445472 - 5445708 + | hypothetical protein TERM 3678 5445799 - 5445771 - g 77 -13.1 -3.61398 | overlap 5445755 CTTCCCCGCCAAGAA CGTCGCCTCGC TGTGCTG GCGGGGCGACG AACTGATCGACTGGG BRADO5233 5445718 - 5446791 + | hypothetical protein BRADO5234 5446788 - 5447495 + | hypothetical protein BRADO5235 5447679 - 5447957 + | putative signal peptide TERM 3679 5447965 - 5447991 + F 93 -19.4 -3.23692 | opp_overlap 5447957 5447944 CCAAGTAGTCGGCGC GCGGCGTGCCGC AGC GCTGCACGCCGC TTCGTGATGCTCATG BRADO5236 5447995 - 5448633 + | putative cytochrome b561 family protein BRADO5237 5448777 - 5449814 + | hypothetical protein TERM 3680 5450003 - 5449977 - T 74 -13.7 -2.88544 | CCGCACTGTCATACA TGCCCTCTCCC ACAAG GGGAGAGGGCG CATTCACGACCATTG TERM 3681 5450110 - 5450090 - T 100 -19.7 -4.45544 | opp_overlap 5450090 CGCGATCAAGCAAAA GGCCGGGGC GAT GCCCCGGCC TTCGTCATCTCCACC TERM 3682 5450090 - 5450110 + T 95 -19.7 -3.24747 | opp_overlap 5450090 CGCGATCAAGCAAAA GGCCGGGGC GAT GCCCCGGCC TTCGTCATCTCCACC ahcY 5451553 - 5450141 - | S-adenosyl-L-homocysteine hydrolase metK 5452991 - 5451792 - | S-adenosylmethionine synthetase TERM 3683 5451818 - 5451852 + g 78 -15.1 -3.30124 | gap 1, opp_overlap 5451795 5451843, overlap 5451810 5451807 GCTTGAACGCCTCGG CGAGGTCGGTCTTCTC CCAG GAGAAG-CCGCCCTCG TTGTCGGGCGTGCGG TERM 3684 5452191 - 5452167 - G 71 -12.7 -3.28712 | GTCCTTGCCGGAGAA CGCGCCGCCGC CAT GCGGGGCCGCG CCACCATACGTGTCG BRADO5240 5454407 - 5453058 - | hypothetical protein TERM 3685 5454797 - 5454784 - g 73 -9.5 -3.9461 | opp_overlap 5454783 CGGCTGGAACAAGAA GGGCG ACTA CGCCC ATGTGATCGCTGATA BRADO5241 5454563 - 5456233 + | hypothetical protein BRADO5242 5457299 - 5456283 - | hypothetical protein BRADO5244 5457678 - 5458013 + | hypothetical protein BRADO5245 5458061 - 5458753 + | hypothetical protein BRADO5246 5458859 - 5459983 + | putative acyltransferase BRADO5247 5460420 - 5459980 - | hypothetical protein BRADO5248 5460367 - 5460696 + | hypothetical protein TERM 3686 5460800 - 5460763 - TR 78 -9.8 -4.08767 | overlap 5460768 5460785 GTCAGGTCTTCAAAA CAGAAGGCCGGATCGG GATAAA CCGATCCGGCCTGATC AGACGAGCGTAGGTC TERM 3687 5460795 - 5460768 - TR 100 -18.5 -3.95435 | overlap 5460763 5460785 GTCTTCAAAACAGAA GGCCGGATCGG GATAAA CCGATCCGGCC TGATCAGACGAGCGT BRADO5249 5461943 - 5460825 - | 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase TERM 3688 5461099 - 5461074 - G 78 -15.5 -3.14132 | gap 1, opp_overlap 5461067 GCCCTTCGGCAGGAA GCGCA-GCGGCT CGA AGCCGCCTGCGC GCTCGCTGTCATACT TERM 3689 5461416 - 5461404 - G 73 -6.2 -4.36914 | GCCGGCGTCATAAAA GGCC TTCAC GGCC TTGCGGTAGGTCTTG BRADO5250 5463003 - 5462287 - | putative branched-chain amino acid ABC transporter, ATP-binding protein BRADO5251 5463749 - 5463003 - | branched chain amino acid ABC transporter ATP-binding protein BRADO5252 5464783 - 5463746 - | branched chain amino acid ABC transporter permease BRADO5253 5465660 - 5464791 - | putative high-affinity branched-chain amino acid transport system permease protein BRADO5254 5467076 - 5465898 - | branched chain amino acid ABC transporter TERM 3690 5466091 - 5466109 + g 70 -2.2 -4.63486 | GCAATCAGGGAATCG CCGTCGGT CTT GCCCTCGG TTTTCTTCAGCGCCT BRADO5256 5467467 - 5467649 + | hypothetical protein purU 5468517 - 5467654 - | formyltetrahydrofolate deformylase BRADO5258 5468667 - 5469491 + | putative uroporphyrinogen-III synthase TERM 3691 5469756 - 5469722 - T 80 -14.2 -3.14211 | ATGGCGCCTCACTAA CGGTGTCGTCCCGGGC TTG ACCCGGGACAACGGCG GAGAGTTACGCGGCG fcl 5470658 - 5469762 - | GDP-L-fucose synthase (GDP-4-keto-6-deoxy-D-mannose-3,5-epimerase-4-reductase) gmd 5471754 - 5470699 - | GDP-mannose 4,6-dehydratase (GDP-D-mannose dehydratase) BRADO5261 5472579 - 5471905 - | transcriptional regulator TERM 3692 5472279 - 5472313 + g 70 -11.2 -3.61715 | GCGCCGCGCGGGTGT CGCGCAGCGCCACCAC GTC GTAGCGGCGCGGCTCG TTCTTGAGCACGCTC BRADO5263 5472928 - 5473737 + | putative high-affinity branched-chain amino acid ABC transporter, ATP-binding protein TERM 3693 5474636 - 5474652 + G 71 -13.7 -2.89564 | opp_overlap 5474648 AGTCATGGACGCCTC GCCGCTG AAG CAGCGGC TGTATCACATCGGCA BRADO5264 5473737 - 5475665 + | putative long-chain-fatty-acid-CoA ligase TERM 3694 5475784 - 5475772 - f 70 -10.5 -3.53811 | overlap 5475780 CGTAGGGTGGGCAAA GGCGC AAA GCGCC GTGCCCACCGACTCA BRADO5265 5475904 - 5476797 + | putative high-affinity branched-chain amino acid transport system permease protein TERM 3695 5477524 - 5477542 + G 77 -13.2 -3.58726 | opp_overlap 5477495 GCGACGGCCGCGCGC TGATCGCG ATC CGCGATCA TTATCTCTCGGCCGA BRADO5266 5476908 - 5477981 + | putative high-affinity branched-chain amino acid transport system permease protein BRADO5267 5478041 - 5479327 + | branched chain amino acid ABC transporter periplasmic-binding protein BRADO5268 5479493 - 5480332 + | high-affinity branched-chain amino acid ABC transporter ATP-bincing protein BRADO5269 5480482 - 5481705 + | putative phenylacetate-CoA ligase TERM 3696 5482510 - 5482498 - g 72 -6.9 -4.18018 | CTGGCTGATGGAAAA GGACG TCG CGCCC CAGGCCGGCAACAAT BRADO5270 5481839 - 5483029 + | putative Formyl-CoA transferase BRADO5271 5483196 - 5483357 + | hypothetical protein TERM 3697 5483407 - 5483435 + T 100 -12.5 -4.77757 | opp_overlap 5483407, overlap 5483394 GATCTTCGACACGAA GCCTTCGTTCG ATCAGCC CGAACGGAGGC TTTTGCTTTTTCCCC TERM 3698 5483522 - 5483501 - T 100 -13.7 -5.40072 | CTCGCGGCAAAAAAA TGCCCGACG CAAG CGCCGGGCA AGAGATCGTCTCGGG BRADO5273 5485340 - 5483820 - | putative TctA subunit of the tripartite tricarboxylate transport(TTT) family BRADO5274 5486033 - 5485491 - | hypothetical protein TERM 3699 5485753 - 5485715 - G 78 -15.3 -3.13403 | gap 1, opp_overlap 5485715, overlap 5485697 5485713 GGGTCGGCACGAACA CCGCCATGACGCG-GCGC AGCT GCGCCCGCGTCACGAAGG TTTCGACCGCCTCCT TERM 3700 5485715 - 5485753 + g 70 -10.9 -3.5393 | gap 1, opp_overlap 5485697 5485715 5485713 GGGTCGGCACGAACA CCGCCATGACGCG-GCGC AGCT GCGCCCGCGTCACGAAGG TTTCGACCGCCTCCT BRADO5275 5487050 - 5486064 - | hypothetical protein BRADO5276 5487977 - 5487180 - | enoyl-CoA hydratase BRADO5277 5489164 - 5487977 - | serine-glyoxylate aminotransferase TERM 3701 5489200 - 5489232 + r 71 -6.2 -4.36914 | GGTCATTTGGTTGGT GCGCGGACGTG-GCAT CCC ACGCGCTCG-CCGCGC TTTTCTCCCGCCAGA BRADO5278 5490584 - 5489379 - | Serine-glyoxylate aminotransferase BRADO5279 5490712 - 5491470 + | GntR family transcriptional regulator TERM 3702 5494498 - 5494465 - g 80 -13.7 -3.72576 | overlap 5494466 5494469 CCTGCCGCCACCAAA TCCAGGACGGCGCCG CCCG CGGCGCCGTCCACGC CGCGCAGCTCCTGGC TERM 3703 5494497 - 5494466 - g 82 -17.2 -2.83403 | overlap 5494465 5494469 CTGCCGCCACCAAAT CCAGGACGGCGCCG CCCG CGGCGCCGTCCACG CCGCGCAGCTCCTGG TERM 3704 5494494 - 5494469 - g 100 -21.9 -2.67803 | overlap 5494466 5494465 CCGCCACCAAATCCA GGACGGCGCCG CCCG CGGCGCCGTCC ACGCCGCGCAGCTCC BRADO5280 5491593 - 5494547 + | bifunctional protein TERM 3705 5494651 - 5494609 - f 77 -15.1 -2.55544 | opp_overlap 5494597 5494594 5494608 5494610 5494613 5494617, overlap 5494605 5494613 5494617 CGAGGAGCGAAGCGA CGAAGCAATCCAGGG CTTCTTGCTTGGC CCCTGGATTGCTTCG CTTCGCTCGCAATGA TERM 3706 5494910 - 5494958 + G 73 -11 -3.72695 | overlap 5494898 5494912 ATGGCGCGCTGGCGC TCGGCCTCGGTTC-GCGCGCGCTG TTC CAGCGCGCCCAGGAGC-AGGCCTA TTTCATCGACGCCGT TERM 3707 5494912 - 5494956 + G 75 -13.6 -3.44848 | overlap 5494898 5494910 GGCGCGCTGGCGCTC GGCCTCGGTTC-GCGCGCGCTG TTC CAGCGCGCCCAGGAGC-AGGCC TATTTCATCGACGCC BRADO5281 5494714 - 5495142 + | hypothetical protein BRADO5282 5495209 - 5496069 + | putative metallo-hydrolase/oxidoreductase BRADO5283 5496176 - 5497180 + | short chain dehydrogenase BRADO5284 5497260 - 5497622 + | hypothetical protein BRADO5285 5498487 - 5497624 - | putative acetyltransferase TERM 3708 5498358 - 5498341 - G 71 -12.7 -3.22298 | overlap 5498301 CTCAGCGACGAGGAA GCCGTCG GGGT CGACGGC GGCAAAGCACGCCGC TERM 3709 5499821 - 5499799 - g 83 -13.4 -3.8211 | opp_overlap 5499799 5499795 CCTGATGTACAACAA GCTGCAGCCG CTG CGGCTTCAGC TGCCTTCCTGATGCG BRADO5286 5498585 - 5499832 + | putative permease TERM 3710 5500313 - 5500292 - T 100 -12.3 -4.49981 | gap 1, opp_overlap 5500306 5500306 GATATCAGGACAAAA CTCG-GGCGC TGA GCGCCGCGAG ATCGCGGACTTATGT BRADO5287 5501293 - 5500514 - | enoyl-CoA hydratase TERM 3711 5500665 - 5500690 + g 71 -9.7 -3.85698 | gap 1, opp_overlap 5500637 GCGCGCATCGCGTAT TTGCCG-CGGCG GAT CGCTGTCGGCGA TTTGTCAACCAAACG BRADO5288 5502103 - 5501366 - | hypothetical protein TERM 3712 5502049 - 5502071 + g 85 -16.2 -3.40522 | TGCCATGCAGCAGCA CGACCCCCGC GTT GCGGGGGCCG TTCTGGTGGCGACGT BRADO5289 5505528 - 5502103 - | acylglycerophosphoethanolamine acyltransferase TERM 3713 5505127 - 5505085 - G 76 -14.7 -3.15861 | opp_overlap 5505116 CAGGATCGCCATGAA GGTCGCGCCCTCGACCAGC GCGTT GCCGGTCGCGAGCTCGCCC ACCGTGAGCTGGTCG BRADO5290 5505878 - 5505621 - | hypothetical protein TERM 3714 5505840 - 5505828 - G 71 -3.4 -4.59773 | GGTGATGTGCAAAAA GCTT ATCCG AAGC GAGGGCCGTTGCACT TERM 3715 5506315 - 5506291 - R 100 -17.1 -4.28651 | opp_overlap 5506278 ACCAAAACGTTAAAA GCCGCCCGCGC CAA GCGCAGACGGC CTCATAACGACTTGA BRADO5292 5508443 - 5506356 - | putative dimethyl sulfoxide reductase(DMSO reductase) TERM 3716 5508175 - 5508154 - G 79 -7.9 -4.46212 | opp_overlap 5508153 TCCGTCAGCAGAAAA CGCTCAGCG ATCT CGTCGAGCG CGTCGTCCCAGGACA TERM 3717 5508674 - 5508700 + H 72 -2.3 -4.67982 | gap 1, opp_overlap 5508674 AGTGCAAGAATGAAT CGGGGCCGAT GGCTCTGG ATC-GCCCTG TTTTCTTCGCTGCAG BRADO5294 5508871 - 5509557 + | putative transcriptional regulator, GntR family BRADO5295 5509644 - 5510618 + | putative TRAP-type C4-dicarboxylate transport system, binding periplasmic protein (DctP subunit) TERM 3718 5510623 - 5510611 - f 79 -9.1 -4.20783 | overlap 5510607 AGCGCATCCAAGAAA TCGCC TAG GGCGA TCTCGGTCGGACAAT BRADO5296 5510652 - 5511164 + | putative TRAP-type C4-dicarboxylate transport system, small permease component (dctQ subunit) BRADO5297 5511188 - 5512477 + | putative TRAP-type C4-dicarboxylate transport system, large permease component BRADO5298 5513356 - 5512625 - | transcriptional regulator BRADO5299 5514514 - 5513930 - | transcriptional regulator TERM 3719 5514785 - 5514796 + G 70 -2.2 -4.67556 | gap 1, overlap 5514785 ATGGACGTGACACAT G-CGG CGC CCGGC TTTTTGCGCTCTTCT BRADO5301 5514783 - 5515100 + | putative cytochrome c BRADO5302 5516220 - 5515120 - | ABC transporter substrate-binding protein BRADO5303 5517002 - 5516223 - | putative ABC transporter ATP-binding protein BRADO5304 5518141 - 5517005 - | putative ABC transporter (permease protein) BRADO5305 5518306 - 5518575 + | hypothetical protein BRADO5306 5518615 - 5519079 + | hypothetical protein BRADO5307 5521803 - 5519110 - | hypothetical protein TERM 3720 5520562 - 5520591 + g 72 -11.5 -3.60098 | gap 1, overlap 5520564 GCCGACCCATGCCGC GAGCACCGGC-TTG GCC CAACGCCGGTGCTG TTTGCGATAAGCGCT TERM 3721 5520564 - 5520589 + g 77 -14.1 -3.38046 | gap 1, overlap 5520562 CGACCCATGCCGCGA GCACCGGC-TTG GCC CAACGCCGGTGC TGTTTGCGATAAGCG BRADO5308 5522058 - 5523053 + | putative alcohol dehydrogenase BRADO5309 5523070 - 5524620 + | nucleotide-binding BRADO5310 5526432 - 5524672 - | putative poly-beta-hydroxybutyrate polymerase (Poly(3-hydroxybutyrate) polymerase)(PHB/PHA polymerase)(PHB/PHA synthase)(Poly(3-hydroxyalkanoate) polymerase)(polyhydroxyalkanoic acid synthase) BRADO5311 5526893 - 5526531 - | hypothetical protein BRADO5312 5527053 - 5527781 + | hypothetical protein BRADO5313 5529117 - 5527834 - | putative Formyl-coenzyme A transferase (Formyl-CoA transferase; carnitine dehydratase) BRADO5314 5529746 - 5529279 - | hypothetical protein BRADO5315 5530050 - 5529751 - | hypothetical protein BRADO5316 5530283 - 5530047 - | hypothetical protein BRADO5317 5530818 - 5530447 - | hypothetical protein TERM 3722 5530881 - 5530846 - H 71 -5.3 -4.52857 | gap 1, opp_overlap 5530856, overlap 5530847 5530848 ATCGTTGAGAGAAAA GCGCGGCG-GATCGCG GCCAA CGCGATCGCTTCGGGC GCGAACCCTATCCCT TERM 3723 5531207 - 5531170 - H 90 -13.5 -4.07568 | gap 1, opp_overlap 5531169 5531176, overlap 5531176 CCTCTCGCCGTAAAA CAAAAAGCCCGCAGCCAA TTT TCGGC-GCGGGCTCTATG ATTACTGCGACGATG TERM 3724 5531201 - 5531176 - H 100 -13.3 -5.45802 | gap 1, opp_overlap 5531169 5531176, overlap 5531170 GCCGTAAAACAAAAA GCCCGCAGCCAA TTT TCGGC-GCGGGC TCTATGATTACTGCG BRADO5318 5531324 - 5531509 + | hypothetical protein BRADO5319 5532410 - 5531523 - | hypothetical protein BRADO5320 5536524 - 5532565 - | sensor histidine kinase BRADO5321 5536584 - 5537894 + | putative manganese transport protein BRADO5322 5538080 - 5539711 + | malate dehydrogenase BRADO5323 5540752 - 5539778 - | arginase TERM 3725 5540315 - 5540285 - G 80 -15.4 -3.25823 | opp_overlap 5540273 5540303 CTCGCCGCACAGGAA CGCCGCCGACATGC CGT GCATGTTGGCGGTG ATGGTCGTCGCAGGC BRADO5324 5540963 - 5541223 + | hypothetical protein BRADO5325 5542427 - 5541231 - | hypothetical protein TERM 3726 5541870 - 5541835 - G 76 -6.1 -4.51378 | gap 1, overlap 5541837 ATGTAGAGCACAAAA GA-GACGGCGAGCGTG GCTGT CGCGCTCGTCATCATC AGCCACAACACGACC TERM 3727 5542610 - 5542587 - H 72 -4.4 -4.56775 | overlap 5542589 ACGGCTGCGGAAAAA GTGCGCAAGG GGAA CCATGCACGC AATGGAACATTCTGC BRADO5326 5542749 - 5542994 + | hypothetical protein TERM 3728 5543160 - 5543188 + G 71 -12.4 -3.29511 | overlap 5543154 CAGATCGGCTTGACG GCGTCGCCGTGG GGCGA CCACGTCGATGC TTATGAGGCGGTCGC BRADO5327 5543100 - 5543303 + | hypothetical protein cycB 5543549 - 5543863 + | cytochrome c-552 precursor (cytochrome c552) BRADO5329 5544298 - 5543945 - | hypothetical protein BRADO5330 5544612 - 5544388 - | hypothetical protein BRADO5331 5545371 - 5545183 - | hypothetical protein TERM 3729 5545666 - 5545654 - H 100 -4.8 -5.69473 | TATACCAGAAAAAAA CGGT CATTT ACCG AACCAGAAGCTGGGA BRADO5332 5545803 - 5546036 + | hypothetical protein BRADO5333 5546860 - 5546183 - | putative exported protein BRADO5334 5547961 - 5546906 - | hypothetical protein TERM 3730 5548782 - 5548753 - g 77 -5.7 -4.65916 | gap 1, opp_overlap 5548754, overlap 5548754 CCGAGGGGAAGAAAA CGCCGGTGAGAGCC ATC AGCT-TCATCGGCA ACAAGGCCTATGACG BRADO5335 5548209 - 5550530 + | putative protective surface antigen precursor (Outer membrane protein D15) BRADO5336 5551001 - 5550573 - | putative signal peptide BRADO5338 5551950 - 5551336 - | hypothetical protein BRADO5339 5552559 - 5552002 - | hypothetical protein BRADO5340 5552703 - 5553329 + | putative LexA repressor BRADO5341 5553450 - 5553725 + | hypothetical protein TERM 3731 5553802 - 5553776 - T 71 -13.7 -2.60075 | overlap 5553775 CCGCGCTCAATCAAC TTGGCCGGCCC TCTGC GGTCCGGCCAA CCCATGACGTCTCGA qor 5554796 - 5553822 - | quinone oxidoreductase (NADPH:quinone reductase) BRADO5343 5555023 - 5555286 + | hypothetical protein sugE 5555459 - 5555785 + | quaternary ammonium compound-resistance protein sugE BRADO5345 5556671 - 5555763 - | putative inner membrane protein BRADO5347 5557082 - 5557303 + | hypothetical protein BRADO5348 5557962 - 5557351 - | hypothetical protein TERM 3732 5557794 - 5557775 - G 72 -5.6 -4.4017 | gap 1, overlap 5557777 TGAATGCGGACAAAA CCCGGACGG TCG CCG-CGGGG CGAGCAATCGAGACC phnN 5558581 - 5557940 - | putative ATP-binding component, PhnN protein phnM 5559735 - 5558578 - | putative metal-dependent hydrolase involved in phosphonate metabolism; PhnM protein phnL 5560465 - 5559752 - | putative phosphonate ABC transporter, ATP-binding component, PhnL protein TERM 3733 5560173 - 5560217 + g 70 -8.4 -4.0162 | gap 1, overlap 5560175 ACATAGCCGATCGTG TGCCGCCGCGCGTCGAGCACC AGGC GCGGCTCGGCGC-CGGCGAGA TTTGTCATCTCGCCC phnK 5561256 - 5560462 - | phosphonates transport ATP-binding protein BRADO5353 5562133 - 5561249 - | putative PhnJ protein, phosphonate metabolism BRADO5354 5563233 - 5562130 - | putative PhnI protein, phosphonate metabolism phnH 5563847 - 5563236 - | carbon-phosphorus lyase complex subunit TERM 3734 5563796 - 5563784 - G 77 -5.5 -4.57569 | overlap 5563785 TCACCGTGCGAAAAA TCGAC TGC GCCGA CAGCACCTTGTCGGC phnG 5564302 - 5563847 - | PhnG protein TERM 3735 5564266 - 5564238 - G 70 -11.8 -3.41602 | gap 1, opp_overlap 5564231, overlap 5564242 CCGATGTCAGCAGAA GGAAC-ATGCGCG AGCA CGCGCATCGCTCC CTTCCGCCTCTCCTG BRADO5357 5564422 - 5565147 + | transcriptional regulator BRADO5358 5566021 - 5565179 - | hypothetical protein BRADO5359 5567081 - 5566026 - | ABC transporter ATP-binding protein BRADO5360 5567869 - 5567084 - | molybdenum ABC transporter permease BRADO5361 5568688 - 5567873 - | putative permease protein; putative membrane protein; putative exported protein TERM 3736 5568119 - 5568080 - G 78 -14.2 -3.53224 | CATTGCGGTTGCAAA GGCGATGGCGCCCGAG GCGACCAG CGCAGGCGCCAGCGCC GGCAGGACGACGTCG TERM 3737 5568647 - 5568629 - G 95 -17.4 -3.8591 | CGGCAGAACGAAGAA GGCGGCCG TCA CGGCCGCC AATGGCAACAGACAC TERM 3738 5568695 - 5568734 + r 74 -14.2 -2.52795 | gap 1, opp_overlap 5568691 GTGCGACATGATCTC G-AGCGTGCCCCGTCGGCT GTT GGCCAGCGGGGCACGCGAC TCCCTTAGCGGACTT BRADO5362 5569746 - 5568739 - | iron ABC transporter BRADO5363 5570750 - 5569902 - | putative PhnE protein, phosphonate ABC transporter, putative membrane protein BRADO5364 5571631 - 5570747 - | putative PhnE protein, phosphonate ABC transporter, putative membrane protein TERM 3739 5571678 - 5571711 + r 93 -19.6 -3.05816 | opp_overlap 5571660 5571659 CTGGCTCTGGTCAAG GCGAGAGCCGGGTC ATGCCC GACCCGGCTCCCGC TTGGATGGGACGTCG BRADO5365 5572660 - 5571728 - | putative PhnD protein, phosphonate ABC transporter, putative exported protein TERM 3740 5572721 - 5572691 - R 77 -14.6 -2.85896 | overlap 5572688 TGCAGTAAGTAACGA GTCTCGCGCCCCGC GAT GCGGAGCCCGTGAC GGTAGAAACCAAGAT phnC 5573547 - 5572738 - | phosphonate ABC transporter ATP-binding protein BRADO5367 5573729 - 5574391 + | putative acetyltransferase TERM 3741 5575168 - 5575151 - g 71 -9.1 -3.84246 | gap 1, opp_overlap 5575151 5575156 CGGTCAACGAGGAAA CGGCGCGC GAG GC-CGCCG CAGGCGGCGACGCCA BRADO5368 5574388 - 5575575 + | putative metal-dependent hydrolase involved in phosphonate metabolism; PhnM protein BRADO5369 5575581 - 5576282 + | hypothetical protein BRADO5370 5577401 - 5576289 - | putative small-conductance mechanosensitive channel BRADO5371 5578278 - 5577523 - | putative 3-ketoacyl-CoA reductase BRADO5372 5579232 - 5578309 - | putative acetamidase/formamidase BRADO5373 5580145 - 5579294 - | putative ABC transporter (permease protein) BRADO5374 5580945 - 5580142 - | putative ABC transporter ATP-binding protein BRADO5375 5582009 - 5580963 - | hypothetical protein TERM 3742 5582103 - 5582091 - H 70 -7.7 -3.97019 | overlap 5582093 AGCAAGGCGAAATAA CAGAC GCG GTCTG CTGAAAAGCTGACGT BRADO5376 5582592 - 5583146 + | thioredoxin peroxidase (AhpC, Alkyl hydroperoxide reductase) BRADO5377 5583149 - 5583694 + | alkylhydroperoxidase, AhpD protein TERM 3743 5583711 - 5583742 + F 100 -14.5 -5.31456 | overlap 5583715 AATCTATCTTATCTG TGAATGCGGCCGG CAATGT CCGGCCGCATTTG TTTTTTGTGAGTTCA TERM 3744 5583715 - 5583738 + F 100 -15.3 -5.13354 | overlap 5583711 TATCTTATCTGTGAA TGCGGCCGG CAATGT CCGGCCGCA TTTGTTTTTTGTGAG TERM 3745 5583844 - 5583808 - f 76 -13.5 -3.16564 | CGTTCATTCGACTAA GCCCCTGAACGCGCGGC GAA GCCGCGCCCCCGGCGGC ACCGGGGTACTCCGC TERM 3746 5584384 - 5584362 - g 73 -4 -4.65895 | CGTGGCACGGAAAAA CTTGCTGCCA GTG CGCCAGCCAG CGATCAATCTGGACG BRADO5378 5584195 - 5585115 + | hypothetical protein TERM 3747 5587564 - 5587545 - g 82 -16.4 -3.33261 | GGCCAACCGCCAGAA GCGGCCGG CCGC CCGGCCGC CGCAATGATCGATGC BRADO5379 5585218 - 5587572 + | putative ABC/TRAP transporter component (periplasmic binding protein-like I) BRADO5380 5588446 - 5587586 - | putative pyrophosphorylase modD (molybdenum transport component) BRADO5381 5588578 - 5589141 + | putative molybdenum ABC transporter, ATP-binding protein mop 5589378 - 5589172 - | molybdenum transporter BRADO5383 5589828 - 5589532 - | putative ferredoxin protein, FixX fixC 5591177 - 5589870 - | FixC protein; flavoprotein-ubiquinone oxidoreductase fixB 5592303 - 5591197 - | protein FixB; electron transfer flavoprotein alpha chain fixA 5593209 - 5592364 - | protein fixA; electron transfer flavoprotein beta-subunit (Beta-ETF) TERM 3748 5593442 - 5593414 - R 100 -18.1 -4.06419 | overlap 5593416 CTCGCTCACAAACAA CAGCGCCGCCGGC AGG ACCGGCGGCGCTT GCGGATATCGAGAGG TERM 3749 5593440 - 5593416 - R 100 -20.7 -3.62695 | overlap 5593414 CGCTCACAAACAACA GCGCCGCCGGC AGG ACCGGCGGCGC TTGCGGATATCGAGA nifW 5593806 - 5593468 - | nitrogenase stabilizing/protective protein cysE 5594594 - 5593803 - | serine acetyltransferase nifV 5595736 - 5594597 - | homocitrate synthase TERM 3750 5595346 - 5595305 - G 76 -15.1 -3.14344 | gap 1, overlap 5595327 CACTTCCGCCAGGAA GCCGACGTCCGCGCGCGAGG AAT CCTCGC-CGCCGACGGCAAC GTCCAATCCCCGGCT BRADO5392 5596562 - 5596068 - | FUR family transcriptional regulator BRADO5393 5597306 - 5596581 - | putative nitrogen fixation protein nifQ TERM 3751 5596737 - 5596767 + g 70 -8.3 -3.92522 | opp_overlap 5596752, overlap 5596752 GTCGTCCTCGCACAG CATGCGATAGAAG AAGCG CTTCCAGCGCATG TTTCTGACGTTCCGG TERM 3752 5596764 - 5596752 - G 71 -9.1 -3.88946 | opp_overlap 5596752 5596737 CATGCGATAGAAGAA GCGCT TCC AGCGC ATGTTTCTGACGTTC TERM 3753 5597384 - 5597346 - R 85 -14.6 -3.64487 | opp_overlap 5597343, overlap 5597348 TGAGAGTTCGAAGAA GAGGTACCGGCCTTCC GACGGGA GGAAGGCCGGTACCAA GACTGCTTAAGCCGT TERM 3754 5597382 - 5597348 - R 100 -21.6 -3.40052 | opp_overlap 5597343, overlap 5597346 AGAGTTCGAAGAAGA GGTACCGGCCTTCC GACGGGA GGAAGGCCGGTACC AAGACTGCTTAAGCC nifH 5598278 - 5597391 - | nitrogenase reductase BRADO5395 5598500 - 5598751 + | hypothetical protein BRADO5396 5598727 - 5599128 + | putative transcriptional regulatory protein (protein cheY homolog) TERM 3755 5599181 - 5599156 - g 76 -8.9 -4.25104 | gap 1, overlap 5599174 CGTGTTCTACGAAAA GCCGGGCTGCGG CAC CAAC-GCCCGGC AGAAGCTGATGCTGA BRADO5397 5599130 - 5599546 + | putative arsenate reductase (nitrogenase-associated protein) TERM 3756 5599527 - 5599562 + T 100 -16.9 -3.57561 | gap 1 GGCCCGAAGCGTCGC CCTG-CCCGGAGCCGC GCTGA GCGGCTCCGGTCCAGG TTTCAGCGCTTCAGC BRADO5398 5599927 - 5599565 - | ferredoxin, 2Fe-2S (AaFd4) BRADO5399 5600253 - 5599924 - | putative glutaredoxin family protein BRADO5400 5600526 - 5600293 - | BolA-like protein BRADO5401 5600790 - 5601281 + | TPR repeat-containing protein BRADO5402 5601376 - 5601738 + | hypothetical protein TERM 3757 5602013 - 5601991 - g 74 -12.6 -3.60098 | ACCGTTGAGCCCAAA GCAGACGGCG AGC CGCCGGCCGC CACACAGGATCCGGT BRADO5403 5601775 - 5602530 + | putative carboxymethylenebutenolidase(dienelactone hydrolase; DLH) BRADO5404 5602555 - 5602797 + | hypothetical protein TERM 3758 5603804 - 5603760 - g 79 -4.8 -4.73388 | overlap 5603778 AAGCTCGAGGAAAAA GGCGGTAACGGCAAGAAGCC GAAGG AGCCTCGGGCCTCCACCACC GATCCGCAGGCGCGG BRADO5405 5602995 - 5604353 + | putative transposase TERM 3759 5604743 - 5604791 + T 76 -14.1 -3.23899 | gap 2, opp_overlap 5604741 5604739, overlap 5604738 5604754 CATTGCAAGCACAGC GGCGTAGCTAGGCGATCCAGAGT CCCGC ACTCTGGATCGCTTCG-T-CGCC TTCGATTCCTTGCAA TERM 3760 5604754 - 5604782 + T 89 -17.6 -3.1886 | opp_overlap 5604741 5604739, overlap 5604743 5604738 CAGCGGCGTAGCTAG GCGATCCAGAGT CCCGC ACTCTGGATCGC TTCGTCGCCTTCGAT BRADO5406 5605290 - 5604832 - | putative hemoglobin protein (truncated hemoglobin) BRADO5407 5605474 - 5605307 - | hypothetical protein BRADO5408 5605799 - 5605485 - | hypothetical protein BRADO5409 5606044 - 5605838 - | hypothetical protein BRADO5410 5606365 - 5606057 - | putative ferredoxin, 2Fe-2S BRADO5411 5607612 - 5606401 - | DegT/DnrJ/EryC1/StrS family aminotransferase BRADO5412 5607875 - 5607615 - | hypothetical protein BRADO5413 5608249 - 5607893 - | hypothetical protein BRADO5414 5608504 - 5608265 - | hypothetical protein BRADO5415 5608824 - 5608501 - | nitrogen fixation protein NifZ BRADO5416 5609594 - 5608821 - | ARM repeat-containing protein BRADO5417 5610120 - 5609587 - | TPR repeat-containing protein BRADO5418 5610461 - 5610132 - | putative iron-sulfur cluster assembly protein (SufA-like) fdxN 5610696 - 5610472 - | ferredoxin-like protein (in nif region) nifB 5612314 - 5610752 - | nitrogenase FeMo cofactor biosynthesis protein NifB TERM 3761 5612551 - 5612529 - R 100 -16.3 -4.3586 | GGACGCACAGCAAAA CAGCGCGGC TTGTG GCCGCGCTG CTCGTGAGTGTGACG BRADO5421 5613441 - 5612575 - | hypothetical protein fixU 5613662 - 5613441 - | fixU nitrogen fixation protein nifS 5614873 - 5613659 - | cysteine desulfurase TERM 3762 5614856 - 5614802 - G 83 -15.7 -3.61398 | gap 1, opp_overlap 5614804 5614811 CTGGTCCGTGAAGAA CGGCAACATCGCCGCGACG-ACCTCG GGGT CGACGCGCGTCGTGGCGTTGTTGTCG AGGTACACCGGACGC TERM 3763 5614811 - 5614847 + g 77 -10.8 -3.79906 | gap 1, opp_overlap 5614802, overlap 5614804 GAAGAACGGCAACAT CGCCGCGACG-ACCTCG GGGT CGACGCGCGTCGTGGCG TTGTTGTCGAGGTAC BRADO5424 5615173 - 5614883 - | putative nifU protein (C-terminal fragment) iscA 5615523 - 5615203 - | Iron-binding protein IscA (iron-sulfur cluster assembly protein) BRADO5426 5615850 - 5616458 + | hypothetical protein TERM 3764 5616666 - 5616637 - T 82 -14.4 -3.27475 | overlap 5616641 GCGCTCAGCATAAGA TGAAGTCCCGGC CCTTGC GCCAGGACTTCA GGTGAGATCTCAGCC BRADO5427 5617137 - 5616676 - | hypothetical protein BRADO5428 5617298 - 5617756 + | hypothetical protein BRADO5429 5617806 - 5618657 + | thiosulfate sulfurtransferase BRADO5430 5618688 - 5619005 + | hypothetical protein TERM 3765 5619249 - 5619302 + T 100 -23.1 -3.35679 | gap 1, opp_overlap 5619260, overlap 5619250 AGGACAAGAATCGTA GGGTGGGCAAAGCCAGCGGCCGGCGC GAA GCGCCGGGCGATGGCGT-GCCCACCA TTGTCGCTGCGCGCG TERM 3766 5619250 - 5619301 + T 100 -26.6 -2.61264 | gap 1, opp_overlap 5619260, overlap 5619249 GGACAAGAATCGTAG GGTGGGCAAAGCCAGCGGCCGGCGC GAA GCGCCGGGCGATGGCGT-GCCCACC ATTGTCGCTGCGCGC TERM 3767 5619292 - 5619260 - T 100 -20.5 -3.53811 | opp_overlap 5619250 5619249 CGTAGGGTGGGCAAA GCCAGCGGCCGGCGC GAA GCGCCGGGCGATGGC GTGCCCACCATTGTC BRADO5431 5619834 - 5619508 - | hypothetical protein fdxB 5620140 - 5619853 - | ferredoxin-3 (ferredoxin III) (FdIII) TERM 3768 5620168 - 5620197 + r 74 -10 -3.79906 | gap 1 TTGTGCGGGCTTTAC GCGGCCTCGAGCT TCTTC AGCTCG-GCCCGC TTCTTCTCCAGCTCG BRADO5433 5620364 - 5620164 - | hypothetical protein BRADO5434 5620851 - 5620381 - | hypothetical protein nifX 5621257 - 5620862 - | nitrogenase molybdenum-iron protein nifX nifN 5622680 - 5621283 - | nitrogenase reductase-associated ferredoxin, nifN TERM 3769 5621800 - 5621764 - G 73 -10.8 -3.70902 | gap 1, opp_overlap 5621791, overlap 5621765 CCGCCGATATGGAAA TGCGCATCCAGCATCGC ATCC GCGA-GCTGGCCGCGCT GGCGGCGATATTTCG TERM 3770 5621799 - 5621765 - G 71 -14.3 -2.82327 | gap 1, opp_overlap 5621791, overlap 5621764 CGCCGATATGGAAAT GCGCATCCAGCATCGC ATCC GCGA-GCTGGCCGCGC TGGCGGCGATATTTC nifE 5624364 - 5622691 - | nitrogenase molybdenum-cofactor synthesis protein nifE TERM 3771 5624455 - 5624490 + r 90 -18.2 -3.07344 | gap 1, opp_overlap 5624459 CCGCATCGTCTGGAG CGAAGCGCGGCGG-CCC CTG GGGACCGCCGCGCGCCG TGTCTTAGCGGATGA TERM 3772 5624486 - 5624459 - R 100 -22 -3.05463 | opp_overlap 5624455 ATCGTCTGGAGCGAA GCGCGGCGGCCC CTGG GGACCGCCGCGC GCCGTGTCTTAGCGG nifK 5626054 - 5624495 - | nitrogenase molybdenum-iron protein beta chain, nifK TERM 3773 5625939 - 5625956 + g 72 -8.4 -4.11371 | CGGATGCGCTCGACT TCCGCG GGATCG CGCGGA TTTTCGAACATCTTC TERM 3774 5626031 - 5626015 - G 74 -8 -4.21194 | CGGGACCACGGAAAA GCTCGA AGTGA TCGAGC ACATGTTCGGCAGAC nifD 5627640 - 5626138 - | nitrogenase molybdenum-iron protein alpha chain, nifD TERM 3775 5627596 - 5627618 + g 71 -2.7 -4.57482 | gap 1 GATCAGTTCCTTGTT GCG-TGCC TTGATCTC GGCAACGC TTTGTTTCTCGATAA nifH 5628605 - 5627718 - | nitrogenase reductase BRADO5442 5629054 - 5629446 + | putative response regulator TERM 3776 5629671 - 5629656 - g 71 -9 -3.79849 | CAACGACAGCAACAA GGTGCA GGGC TGCACC AGCCAGGTGTGGGTC sufE 5629504 - 5629950 + | hypothetical protein TERM 3777 5630025 - 5630003 - T 77 -14.9 -2.87564 | CTAGCGCGGCATACA CCCTCTCCC CTTGT GGGAGAGGG TGGCGCGCACGAGCG sufS 5631464 - 5630220 - | cysteine desulfurase sufD 5632790 - 5631465 - | sufD, needed for fhuF Fe-S center production/stability sufC 5633570 - 5632809 - | ABC transporter associated with Fe-S cluster assembly, ATP binding protein sufB 5635126 - 5633609 - | cysteine desulfurase activator complex subunit SufB TERM 3778 5633980 - 5634015 + g 70 -6.1 -4.26344 | CGATGCCCTTGGAGA TGATCCGGCTCGACG TGTTCT TGCCGAGATGGATCA TTTTGGTGCCGCTAT yfhL 5635360 - 5635166 - | ferredoxin TERM 3779 5635764 - 5635734 - R 71 -4.7 -4.48987 | gap 2, overlap 5635739 TTCTGACAACGAAAA GAGCAC-CAG-CGCG CAT CACGGCAGTGTGCTC GTGGACCCCTACCCC TERM 3780 5635884 - 5635901 + r 79 -8.3 -4.25104 | opp_overlap 5635884 5635879 ACCCATAACAGAAAA GGCGCAC ATCC GCGCGCC TTTTGATCCGAGCAA TERM 3781 5635901 - 5635884 - R 100 -10.5 -4.74285 | opp_overlap 5635884, overlap 5635879 ACCCATAACAGAAAA GGCGCAC ATCC GCGCGCC TTTTGATCCGAGCAA nifA 5637667 - 5635928 - | Mo/Fe nitrogenase specific transcriptional regulator, NifA TERM 3782 5637533 - 5637558 + g 76 -8.9 -4.17089 | GTTGGCGAGGGTGAT TTCCAGCCGCG TCGG CGCGGCGAGAA TTTTCGAGATTTCGA fixR 5638926 - 5638081 - | FixR protein; short-chain dehydrogenase BRADO5451 5639268 - 5640086 + | hypothetical protein BRADO5452 5640193 - 5640435 + | hypothetical protein BRADO5453 5641575 - 5640718 - | oxidoreductase NAD(P)-binding subunit BRADO5454 5641727 - 5641909 + | hypothetical protein BRADO5455 5642355 - 5642200 - | hypothetical protein BRADO5456 5642569 - 5642381 - | hypothetical protein BRADO5457 5643059 - 5642703 - | hypothetical protein TERM 3783 5643033 - 5643009 - G 72 -15 -2.71731 | overlap 5643011 GGCAGTGTTGAACCA CAGCGCAGCC GCCAA GGCTGCGCCG CTCAGCGCAAGCAAG TERM 3784 5643031 - 5643011 - G 71 -14 -2.90392 | overlap 5643009 CAGTGTTGAACCACA GCGCAGCC GCCAA GGCTGCGC CGCTCAGCGCAAGCA BRADO5458 5644530 - 5643166 - | putative two-component sensor histidine kinase BRADO5459 5644740 - 5645360 + | two-component LuxR family response regulator TERM 3785 5645358 - 5645402 + F 70 -7.8 -4.08945 | opp_overlap 5645348, overlap 5645361 5645365 GAGAACGGCGTCGCT TG-ACATCGGGCCGGCGGCGCG CTC CGTTCCGCCG-CCCCATGTTCC TTTTCGACAGGTGAT TERM 3786 5645361 - 5645398 + F 81 -14.1 -3.66908 | gap 1, opp_overlap 5645348, overlap 5645358 5645365 AACGGCGTCGCTTGA CATCGGGCCGGCGGCGCG CTC CGTTCCGCCG-CCCCATG TTCCTTTTCGACAGG TERM 3787 5645365 - 5645395 + F 80 -16 -2.64333 | overlap 5645361 5645358 GCGTCGCTTGACATC GGGCCGGCGGCGCG CTC CGTTCCGCCGCCCC ATGTTCCTTTTCGAC TERM 3788 5645732 - 5645762 + G 90 -17.6 -3.53563 | overlap 5645719 TTTCGGCCTCGGCGC CGGCTTCTACGTCG ATG CGACGCAGGAGCCG TTTGCGAAGAACTAT fghA 5645421 - 5646266 + | S-formylglutathione hydrolase BRADO5461 5647627 - 5647148 - | hypothetical protein BRADO5462 5647768 - 5648976 + | hypothetical protein BRADO5463 5649324 - 5650217 + | putative quinoprotein amine dehydrogenase, beta chain-like BRADO5464 5650280 - 5651044 + | putative ABC transporter ATP-binding protein BRADO5465 5651041 - 5651895 + | ABC transporter permease BRADO5466 5651892 - 5652503 + | hypothetical protein BRADO5467 5653255 - 5652695 - | hypothetical protein BRADO5468 5654127 - 5653252 - | putative methanol oxidation protein, mxaJ-like protein TERM 3789 5654192 - 5654172 - H 82 -11.1 -4.08394 | AGATCTTTTTGAAAA TGCTAGGCC GCC GGCCTCGCA TGCGCAACAGCTGCC TERM 3790 5654487 - 5654444 - g 74 -10.2 -3.81447 | overlap 5654433 5654420 GACAGCCGACAACAA CGGAGCCATCGCCAATGTCG GCTT CATCATCGGCGATGAGGCCG TGGCCGTGATCGACA BRADO5469 5654289 - 5655215 + | putative metallo-beta-lactamase family protein BRADO5470 5655272 - 5656093 + | putative signal peptide BRADO5471 5656476 - 5656117 - | hypothetical protein BRADO5472 5656563 - 5657543 + | putative ABC transporter (substrate-binding protein) BRADO5473 5657543 - 5658280 + | ABC transporter permease BRADO5474 5658270 - 5658980 + | putative ABC transporter ATP-binding protein BRADO5475 5659017 - 5659364 + | hypothetical protein BRADO5476 5659603 - 5659391 - | hypothetical protein TERM 3791 5659572 - 5659529 - G 70 -10.9 -3.53012 | gap 1, overlap 5659531 5659567 GCCGCCGTCGGCAAA GACGAGGTGCTGCTCCTCGC AGGTG GCGGGGGACAGCACCGCG-C AGACGGTGATGACGA TERM 3792 5659571 - 5659531 - G 78 -14.6 -3.34398 | overlap 5659529 5659567 CGCCGTCGGCAAAGA CGAGGTGCTGCTCCTCGC AGGTG GCGGGGGACAGCACCGCG CAGACGGTGATGACG BRADO5477 5659806 - 5660114 + | ethD like-protein BRADO5478 5660291 - 5660211 - | coenzyme PQQ synthesis protein A (fragment) BRADO5479 5660830 - 5660483 - | hypothetical protein BRADO5480 5661140 - 5662804 + | putative quinoprotein ethanol dehydrogenase TERM 3793 5662843 - 5662863 + G 85 -18.3 -2.74563 | opp_overlap 5662829 5662843, overlap 5662856 AGATGTTCATGAGAA CGGCGGCGA CCT TCGCCGCCG TCGTTGCGATCTCGG TERM 3794 5662863 - 5662843 - g 89 -18.3 -3.41229 | opp_overlap 5662843 5662856, overlap 5662829 AGATGTTCATGAGAA CGGCGGCGA CCT TCGCCGCCG TCGTTGCGATCTCGG BRADO5481 5662830 - 5663171 + | putative cytochrome c like protein BRADO5482 5663171 - 5664106 + | ABC transporter periplasmic-binding protein BRADO5483 5665140 - 5664118 - | AraC/XylS family transcription factor TERM 3795 5664543 - 5664507 - G 77 -13.8 -3.38951 | gap 1, opp_overlap 5664514 GCAGCAACAGATCAA TCAGCG-ACTCGGCGAC GCTG GCCGCCGAGTTCGGTGA CAACCGTGTCGCCTC TERM 3796 5665507 - 5665541 + G 70 -10.7 -3.53012 | gap 1 TACTCGCAACATGTC TGACGTCAGTCGCGGC GCTC GCCGCGGGTGGCG-CA TTTGCCAGCGAAGAG mxaF' 5665479 - 5667281 + | methanol dehydrogenase large subunit-like protein BRADO5485 5667414 - 5667893 + | putative cytochrome c protein adhC 5667957 - 5669066 + | S-(hydroxymethyl)glutathione dehydrogenase gfa 5669100 - 5669663 + | glutathione-dependent formaldehyde-activating enzyme TERM 3797 5669671 - 5669654 - f 73 -8.3 -4.05788 | overlap 5669655 TGTGGCGAAAGCAAA GGCGGCC TGAC GGCCGCG GACTACCAAGCGTAA TERM 3798 5669715 - 5669749 + F 85 -10 -4.2704 | gap 1, overlap 5669717 CCTTCCTGAAGACTT G-GTGCCTCGCCCGC CTTCGC GCTGGCGAGGCATTC TTTCTTGGTGGTGCA TERM 3799 5669717 - 5669746 + F 100 -15 -4.25016 | overlap 5669715 TTCCTGAAGACTTGG TGCCTCGCCCGC CTTCGC GCTGGCGAGGCA TTCTTTCTTGGTGGT iorA 5670036 - 5670488 + | isoquinoline 1-oxidoreductase alpha subunit TERM 3800 5672560 - 5672590 + G 86 -16.3 -3.53012 | gap 1 TGCTGCGATCATGGG GCTGAGCCTCGCCA AATA TGGCGAGG-TCAGC TTTAAGAACGGCCGG iorB 5670491 - 5672824 + | isoquinoline 1-oxidoreductase beta subunit TERM 3801 5672877 - 5672839 - T 80 -16.1 -2.62263 | gap 1, opp_overlap 5672834 5672833 ACGGCCGCGACACGA CGACG-TCATCGGCCGGA GCAA TCCGGCCGATGAGCGCCT CGACAGAGCTTTGAT BRADO5490 5673270 - 5672896 - | putative transposase BRADO5492 5673578 - 5674516 + | putative acetamidase/formamidase family protein BRADO5493 5676018 - 5674525 - | putative 4Fe-4S ferredoxin, fixG-like protein TERM 3802 5676240 - 5676265 + r 70 -13.2 -2.89191 | GCGTTCTCTTGGTGC CGCGCAGCGG CAATGC CCGCCGCGCG TCTCTCACCGTGTGC BRADO5494 5677334 - 5676540 - | putative fumarylacetoacetate hydrolase family protein TERM 3803 5677353 - 5677371 + H 70 -10.2 -3.56318 | overlap 5677363 GTTCCTCCTGAGATC GGCCGCCT CCC AGGCAGCC TGTTGTTCTTCGGCG BRADO5495 5677399 - 5677758 + | hypothetical protein TERM 3804 5678032 - 5677983 - f 73 -11.4 -3.56092 | gap 2, opp_overlap 5678027, overlap 5677984 GCACGACCCCCCAAA CCCTCACCC-T-GAGGGGCCCGCC CTCC GGCGGGCGTCTCGAAGGGCGAGGC CTCGGTCGGGCCTCG TERM 3805 5678031 - 5677984 - f 75 -14.9 -2.73441 | gap 2, opp_overlap 5678027, overlap 5677983 CACGACCCCCCAAAC CCTCACCC-T-GAGGGGCCCGCC CTCC GGCGGGCGTCTCGAAGGGCGAGG CCTCGGTCGGGCCTC TERM 3806 5678811 - 5678775 - g 71 -12.2 -3.29043 | gap 1, opp_overlap 5678802, overlap 5678777 AATTCTGGCCGACAA GACCCGCGAGCTGCGCG ACTA CGCGCAGCG-GCAGGGC ATCACCGTCTCCGGC TERM 3807 5678809 - 5678777 - g 72 -13.4 -3.21276 | gap 1, opp_overlap 5678802, overlap 5678775 TTCTGGCCGACAAGA CCCGCGAGCTGCGCG ACTA CGCGCAGCG-GCAGG GCATCACCGTCTCCG BRADO5496 5678299 - 5678910 + | heme-binding protein BRADO5497 5679929 - 5679153 - | putative cyclase BRADO5498 5680965 - 5679976 - | putative fumarylacetoacetate hydrolase family protein TERM 3808 5680939 - 5680894 - G 76 -14.7 -3.12351 | gap 1, opp_overlap 5680894 GGCTGCCAGATCGAA GAGCCGGGAA-TCACCGGCGTG GAC CACGCCGATCCGCTCCCGGCCC TCGGTTCGAAATGTC TERM 3809 5681478 - 5681466 - g 75 -4.7 -4.66833 | opp_overlap 5681473, overlap 5681467 CTTCAAGGGCAAAAA GGTCG GCG CGCCC GGCATCGGCGCTTTC TERM 3810 5681660 - 5681710 + G 71 -13.9 -2.83249 | gap 1, opp_overlap 5681653 5681652, overlap 5681658 TGACCAACGCCAATC TCGGCATGGTCGGCGCGCGCTACG CCGC CG-AGCTCGCCCGGACCGAGCCGA TCATCTTCTATGCGG BRADO5499 5681065 - 5682000 + | ABC transporter substrate-binding protein BRADO5500 5682000 - 5682698 + | GntR family transcriptional regulator TERM 3811 5683091 - 5683052 - g 73 -15 -2.90496 | gap 1, overlap 5683031 5683049 TCGCGCTGGAAACGA TCGGC-ATGCCCGCCGCGC AGC GCGAGGCGCGCATCACCGA GCTGCTCGCCAAGGT TERM 3812 5683266 - 5683308 + G 76 -14.8 -3.1505 | opp_overlap 5683271 GCAAGGCCTTCAGGA CGAGATGCTGGCGCTGGTTG CGG CGACCGGCGCCACCGTCGTG TTCGTGACGCATGAT atsC 5682700 - 5683503 + | ABC transporter ATP-binding protein TERM 3813 5684112 - 5684161 + G 77 -13.5 -3.57918 | gap 1, opp_overlap 5684096, overlap 5684116 CCGCTCGGCCTCGGC GCCGGCATCATGACGGCGCAGCAG GGA CTGCAGC-CCGACCTGATGCTCGC TTATCTCGTCTGGAT BRADO5502 5683500 - 5684267 + | putative ABC transporter (permease protein) BRADO5503 5684264 - 5685031 + | putative ABC transporter (permease protein) BRADO5504 5686412 - 5685033 - | putative fumarate reductase/succinate dehydrogenase flavoprotein TERM 3814 5685131 - 5685099 - G 70 -13.3 -2.98823 | GTTGCCGGAGAGATA GCCGGCGGCGTCCGC GCC GGAGACGCCGCAAGC CGCGCCACCGACGGC BRADO5505 5687023 - 5686409 - | putative isochorismatase family protein TERM 3815 5686917 - 5686880 - G 70 -10.6 -3.59738 | opp_overlap 5686889 CATCAGATCGGCAAA CGGCTTGA-GCCGCGGCG GCAG CGCCGCGATGTCA-GCCG CCGTCTGTCCCGCAC hyuA 5689080 - 5687020 - | N-methylhydantoinase A (Hydantoin utilization protein A) TERM 3816 5688561 - 5688577 + g 75 -13.7 -3.33261 | TCGCCTGCACGGCTT CGAGCGC GCG GCGCTCG TTGTCGGGATTGGCG hyuB 5690810 - 5689077 - | N-methylhydantoinase B (Hydantoin utilization protein B) TERM 3817 5689366 - 5689403 + g 70 -11.1 -3.54424 | gap 1, opp_overlap 5689360 GCGAAATGATTGAGC GCGGCGCTG-CCGCCGCC GGC GACGCCGAACGGCGCCGC TTTGCCGCGCTCGCC BRADO5508 5691685 - 5690807 - | putative isocitrate lyase-family protein, putative carboxyvinyl-carboxyphosphonate phosphorylmutase BRADO5509 5692429 - 5691728 - | branched chain amino acid ABC tranpsorter ATP-binding protein livG 5693165 - 5692422 - | branched chain amino acid ABC transporter ATP-binding protein BRADO5511 5694133 - 5693165 - | putative branched-chain amino acid ABC transporter (permease protein); livM-like protein BRADO5512 5695002 - 5694130 - | branched chain amino acid ABC transporter permease BRADO5513 5696472 - 5695249 - | putative leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein (LIVAT-BP) (Leu/Ile/Val/Thr/Ala-binding protein) TERM 3818 5696151 - 5696134 - G 80 -14.1 -3.65199 | overlap 5696121 AATGCCCGAGGCAAA GCCGCCG AGCA CGGCGGC CACGCCGGCCGATTG BRADO5514 5697293 - 5696469 - | transcriptional regulator TERM 3819 5698948 - 5699002 + G 70 -10.6 -3.53012 | gap 1 CAACGGCCCCGTGTT CACCCTGCCCGATGCGCTGCGC-GC GCCGGG GCAGCTCGGCGCATCGGTCGCCGTG TTTGACCGCACCGGC BRADO5515 5697440 - 5699443 + | putative NADH-dependent flavin oxidoreductase; putative N-methylproline demethylase (stachydrine utilization protein stcD) leuC 5699484 - 5700902 + | isopropylmalate isomerase large subunit leuD 5700899 - 5701516 + | 3-isopropylmalate dehydratase small subunit (isopropylmalate isomerase) (Alpha-IPM isomerase) (IPMI) TERM 3820 5701584 - 5701558 - T 100 -21.6 -4.14627 | CCTCCACAGAAAGAA GCCGCCCGCACG TAG CGTGCAGGCGGC CCAAGTCCAGGGAGG BRADO5518 5702218 - 5701718 - | hypothetical protein BRADO5519 5702395 - 5702550 + | hypothetical protein BRADO5521 5704403 - 5703012 - | M20/M25/M40 family peptidase TERM 3821 5703300 - 5703333 + g 78 -5.9 -4.62069 | gap 1, opp_overlap 5703275 5703264, overlap 5703302 5703303 CGACGGCAGCATGCC GC-CGCGCCGGATG AACTCGA CCTCCGGCGCATGC TTTTTCACATGGGCC TERM 3822 5704501 - 5704474 - H 78 -12 -3.75153 | CGTCCGGAACGCAAA TGACGAGCGAAG CGAA CTCCGCGCGTCA TCGACCGATCAATCG BRADO5522 5704685 - 5704969 + | hypothetical protein BRADO5523 5707691 - 5705274 - | hypothetical protein TERM 3823 5705633 - 5705623 - G 75 -3.2 -4.7629 | CCATCAAGTGAAAAA TCCG ACT CGAA AACGCGGATCTCAGT TERM 3824 5708479 - 5708463 - R 100 -10.8 -4.87665 | opp_overlap 5708463 TTCGATGCAGAAAAA CCGCCG GCGGG CGGCGG TTTTCCTAAAGCGAA TERM 3825 5708463 - 5708479 + r 89 -10.8 -4.25104 | opp_overlap 5708463 TTCGATGCAGAAAAA CCGCCG GCGGG CGGCGG TTTTCCTAAAGCGAA BRADO5524 5709147 - 5708530 - | putative signal peptide TERM 3826 5708766 - 5708785 + g 70 -10 -3.7282 | gap 1 GGGTCTTGTAGAGCG GGTCGGCGG CAT CCG-CGACC TTCTTCATCGCGTCC dctM 5710622 - 5709297 - | TRAP-type C4-dicarboxylate transport system, large permease component (dctM subunit) TERM 3827 5710623 - 5710590 - G 79 -4.7 -4.77036 | gap 1, overlap 5710607 5710610 TGTCAGCATCAAAAA GATGAGCAGGCC GAAGATCAGGA GGC-TGCTCATC GCACAGCCTCCACGC dctQ 5711203 - 5710619 - | TRAP-type C4-dicarboxylate transport system, small permease component (dctQ subunit) TERM 3828 5711267 - 5711289 + r 83 -16.2 -2.92389 | TGCCAGGCCTTGCCC CGCGCGGGCC GCC GGCCCGCGCC TGTCTCGCTCAATTC dctP 5712322 - 5711306 - | TRAP-Type C4-dicarboxylate transport system, binding periplasmic protein (DctP subunit) leuA 5714189 - 5712612 - | 2-isopropylmalate synthase BRADO5529 5714484 - 5714317 - | hypothetical protein BRADO5530 5715937 - 5714780 - | putative transposase BRADO5531 5716699 - 5717433 + | alpha/beta family hydrolase BRADO5532 5717572 - 5719122 + | putative Beta-lactamase BRADO5533 5719330 - 5719929 + | hypothetical protein BRADO5534 5720032 - 5720328 + | hypothetical protein BRADO5535 5721076 - 5720510 - | hypothetical protein BRADO5537 5721455 - 5721222 - | hypothetical protein BRADO5536 5721090 - 5721503 + | hypothetical protein TERM 3829 5721913 - 5721949 + G 73 -10.9 -3.63627 | gap 2, opp_overlap 5721911 5721910 5721913 CATCGCGCACAAGGA GCTGA-CG-CGGGCGCT CGTCC GGCGCCCGGCGCTCGGC TTTGCGATCTGGCGC BRADO5538 5721581 - 5722306 + | CRP/FNR family transcriptional regulator BRADO5539 5722933 - 5722316 - | putative SCP-like extracellular protein BRADO5540 5723281 - 5722934 - | hypothetical protein TERM 3830 5723194 - 5723213 + g 70 -10.6 -3.59979 | overlap 5723208 CGGCCTCGCCCATGG CGCCGCGG AGCG CCTCGGCG TTTGCCGTGGGGACG BRADO5541 5723469 - 5724716 + | Bcr/CflA family drug resistance transporter BRADO5542 5726469 - 5724724 - | putative secreted protein related to heme utilisation BRADO5543 5726651 - 5727802 + | putative signal peptide BRADO5544 5727947 - 5730715 + | signaling protein BRADO5545 5731769 - 5730831 - | hypothetical protein BRADO5546 5732482 - 5731766 - | hypothetical protein TERM 3831 5732406 - 5732382 - G 74 -12.1 -3.53012 | opp_overlap 5732371 5732383, overlap 5732383 TGCCGCTCGGCGAAA TGCGCCGCGAT GTC ATCGCGACGCT CTTGCGCGAACGGCC TERM 3832 5732405 - 5732383 - G 75 -15.6 -2.71712 | opp_overlap 5732371 5732383, overlap 5732382 GCCGCTCGGCGAAAT GCGCCGCGAT GTC ATCGCGACGC TCTTGCGCGAACGGC TERM 3833 5732383 - 5732405 + g 70 -13.4 -3.01712 | opp_overlap 5732383 5732382, overlap 5732371 GCCGCTCGGCGAAAT GCGCCGCGAT GTC ATCGCGACGC TCTTGCGCGAACGGC BRADO5547 5733493 - 5732486 - | ABC transporter substrate-binding protein BRADO5548 5734501 - 5733716 - | ABC transporter permease TERM 3834 5734477 - 5734436 - G 74 -10.1 -3.7941 | gap 1, overlap 5734433 5734437 GACGTTGGACAACAA CTGCCACAGCGCGATCGCGA CGA TCGCGACCA-GCAGCTGCAG CGCGAGCAGACCGAG BRADO5549 5735534 - 5734722 - | ABC transporter ATP-binding protein BRADO5550 5735609 - 5736436 + | putative glycine betaine/carnitine/choline ABC transporter ATP-binding protein BRADO5551 5736442 - 5737989 + | putative glycine betaine/carnitine/choline ABC transporter (permease and substrate binding protein) BRADO5552 5738691 - 5738296 - | putative rhodanese-related sulfurtransferase BRADO5553 5740558 - 5738798 - | putative sulfatase family protein BRADO5554 5741265 - 5740684 - | hypothetical protein BRADO5555 5741846 - 5741535 - | hypothetical protein BRADO5556 5742703 - 5741846 - | oxidoreductase BRADO5558 5743236 - 5744360 + | hypothetical protein TERM 3835 5744605 - 5744630 + T 81 -12.6 -3.76125 | gap 1, opp_overlap 5744605 CTGTGGCCGTAAAAA GCCTCCG-CCC TGGCC GGGACGGAGGC TTTCGATTGAGCTGA TERM 3836 5744630 - 5744605 - T 100 -14 -4.56597 | opp_overlap 5744605 CTGTGGCCGTAAAAA GCCTCCGCCC TGGCCG GGACGGAGGC TTTCGATTGAGCTGA ilvC 5745709 - 5744690 - | ketol-acid reductoisomerase BRADO5560 5746462 - 5745860 - | amino acid transporter LysE TERM 3837 5746586 - 5746564 - R 84 -8.4 -4.431 | overlap 5746565 CAGCGAGCCAGAAAA CGACTCCTCA TCC TGAGGAGCCC GCCGCAGGCGGGCGT TERM 3838 5746585 - 5746565 - R 72 -11.9 -3.25378 | overlap 5746564 AGCGAGCCAGAAAAC GACTCCTCA TCC TGAGGAGCC CGCCGCAGGCGGGCG BRADO5561 5747401 - 5746712 - | putative S-adenosyl-L-methionine (SAM)-dependent methyltransferase ilvH 5747947 - 5747405 - | acetolactate synthase 3 regulatory subunit BRADO5563 5749082 - 5748099 - | hypothetical protein ilvI 5751010 - 5749241 - | acetolactate synthase 3 catalytic subunit TERM 3839 5751107 - 5751092 - R 100 -8.2 -5.4505 | opp_overlap 5751105 TCGGGCAATAAAAAA GGGCCC TGGA AGGCCC TGCGCACCGCTCGGA BRADO5565 5751778 - 5751344 - | putative plasmid stability protein stbB miaA 5752989 - 5752063 - | tRNA delta-2-isopentenylpyrophosphate transferase TERM 3840 5752439 - 5752470 + g 72 -14.4 -3.06796 | gap 1, overlap 5752444 GGCGGCGTGGTCTCG GCGTGCCAGTCGGCC AAT GGCCGACCGGT-CGC TTCGATGACCTCCAG TERM 3841 5752444 - 5752466 + g 71 -14.8 -2.55015 | overlap 5752439 CGTGGTCTCGGCGTG CCAGTCGGCC AAT GGCCGACCGG TCGCTTCGATGACCT serB 5752993 - 5753883 + | phosphoserine phosphatase (PSP) (O-phosphoserine phosphohydrolase) (PSPase) TERM 3842 5754125 - 5754105 - f 91 -9.7 -4.62054 | CCAAGGAAACGAAAA CGGTTGCAT GTG ATGCAGCCG ATCATCGTCACAGAA BRADO5569 5754151 - 5754420 + | putative signal peptide BRADO5570 5754707 - 5755420 + | putative NADPH-dependent FMN reductase; ArsH-like protein BRADO5571 5755584 - 5755859 + | hypothetical protein TERM 3843 5756207 - 5756250 + T 70 -11.6 -3.14564 | gap 1, opp_overlap 5756218 TGCGGAGCTGCCGTA GGGTGGGCAAAGTGGACGCCC GCA GGGCGGTCGCGT-GCCCACCA TTGATCCGCAAATGC BRADO5572 5757873 - 5756374 - | putative Serine protease do-like precursor TERM 3844 5756903 - 5756959 + g 73 -12.8 -3.36749 | gap 1, overlap 5756902 5756901 5756927 CCCGGCTCGATGCCG GCCGGCTTGGCCGGGCCCTTGTCGTCG ACGC CGGCGACCAGCGCGCCGC-GCGCCGGC TTGATGTTGAGGCTC TERM 3845 5757575 - 5757601 + g 72 -11.5 -3.62046 | gap 1 GGCGAATTGTCGGCG CCGCCTCGG-CC GCCC GGACCGCGGCGG TTCTTGAAGAAGTCG BRADO5573 5758303 - 5758097 - | hypothetical protein TERM 3846 5758328 - 5758380 + r 70 -10.6 -3.61398 | gap 1, opp_overlap 5758340 5758342 5758355, overlap 5758330 5758331 ACCTCCCGTTTGACC TTCTTGATATCAGACGGGGCGAAGC AACG GCTTCGCCCCGTCCG-TGTCAACTC TTATTCGCCGGCAAC TERM 3847 5758330 - 5758378 + r 91 -17.6 -3.38812 | gap 1, opp_overlap 5758340 5758342 5758355, overlap 5758328 5758331 CTCCCGTTTGACCTT CTTGATATCAGACGGGGCGAAGC AACG GCTTCGCCCCGTCCG-TGTCAAC TCTTATTCGCCGGCA TERM 3848 5758331 - 5758377 + r 91 -21.1 -2.63073 | gap 1, opp_overlap 5758340 5758342 5758355, overlap 5758330 5758328 TCCCGTTTGACCTTC TTGATATCAGACGGGGCGAAGC AACG GCTTCGCCCCGTCCG-TGTCAA CTCTTATTCGCCGGC TERM 3849 5758369 - 5758340 - R 100 -23.7 -2.62263 | opp_overlap 5758331 5758330 5758328, overlap 5758342 5758355 ACCTTCTTGATATCA GACGGGGCGAAGC AACG GCTTCGCCCCGTC CGTGTCAACTCTTAT TERM 3850 5758367 - 5758342 - R 93 -20.5 -2.85351 | opp_overlap 5758331 5758330 5758328, overlap 5758340 5758355 CTTCTTGATATCAGA CGGGGCGAAGC AACG GCTTCGCCCCG TCCGTGTCAACTCTT hflC 5759352 - 5758411 - | protease activity modulator HflK hflK 5760479 - 5759349 - | protease activity modulator HflK TERM 3851 5760518 - 5760538 + r 86 -13.9 -3.85698 | opp_overlap 5760516 5760514 5760517 GATACTGCAAAGACG CCGGCCCCC GAC GGCGGCCGG TTTATAAGGGACGGC TERM 3852 5760628 - 5760612 - R 71 -9.4 -3.75153 | opp_overlap 5760611 5760612 5760616 5760621 5760623, overlap 5760615 TTTTGTCAATGTAAA CAGCGC GCCAA GCGCTG GTTTGCCGCGGCTGG folA 5761242 - 5760730 - | dihydrofolate reductase BRADO5577 5761724 - 5761239 - | putative acetyltransferase family protein; putative spermidine/spermine acetyltransferase thyA 5762522 - 5761728 - | thymidylate synthase BRADO5579 5764184 - 5762673 - | hypothetical protein BRADO5580 5764971 - 5764192 - | hypothetical protein BRADO5581 5765604 - 5765071 - | chromate transporter BRADO5582 5766197 - 5765601 - | putative chromate transport protein (ChrA-like) BRADO5583 5766925 - 5767491 + | hypothetical protein fumC 5767588 - 5769012 + | fumarate hydratase BRADO5585 5769245 - 5769430 + | hypothetical protein BRADO5586 5769430 - 5769726 + | hypothetical protein TERM 3853 5769798 - 5769778 - f 74 -12.6 -3.38991 | overlap 5769765 5769776 ATCGCTCTAAGAAGA CGCGGCAT TTCGC ATGCCGCG CTTGACCTCTTGGCA feoA 5769834 - 5770109 + | putative FeoA family protein TERM 3854 5771483 - 5771462 - g 73 -12.3 -3.40403 | GCTGCCCGACTACAA GATGCCGCG GCTG CGCAGCATC GCGATCGGCGTCTAC TERM 3855 5771647 - 5771623 - g 71 -14.3 -2.93723 | overlap 5771618 CGGCGATCAATTACA GCCTGGCCG CGATGAT CGGCCAGGC CATTGCGCCGCTGCT TERM 3856 5771879 - 5771930 + G 71 -9.4 -3.84639 | GCAATGCGCTTCCAC GCTCGCTGTCATCCGCCGCGAG ACCGGCAG CTGGCGCTGGATGGCAGTGACC TTCTTCTACATGTTC feoB 5770131 - 5772008 + | ferrous iron transport protein B TERM 3857 5772032 - 5771983 - T 81 -16.3 -2.80816 | gap 1 TCGCGACCTACCACA TCGCGGTGG-CGATGGGCGCGGGC TGA GCCCACGCCCATCGGCCTCATCGC GCGATATGCAGCGCG BRADO5589 5772808 - 5772026 - | NAD(P)H dehydrogenase quinone family protein BRADO5590 5772899 - 5773822 + | LysR family transcriptional regulator BRADO5591 5775406 - 5773838 - | putative carboxylesterase, type B BRADO5592 5777324 - 5775453 - | putative 4-hydroxyphenylpyruvate dioxygenase containing a TIM-barrel fold (N-ter) TERM 3858 5775744 - 5775726 - G 79 -11.6 -3.87815 | GGGGATGTCGAGAAA GCCCGCCC CAC GGGCGCGC ATCTCGGCCACCGCT BRADO5593 5778058 - 5777321 - | putative branched-chain amino acid ABC transporter ATP-binding protein BRADO5594 5778813 - 5778070 - | putative branched-chain amino acid ABC transporter ATP-binding protein TERM 3859 5778435 - 5778418 - G 73 -11.3 -3.63515 | opp_overlap 5778417 5778416 CTCCAGCTTGAAGAA GCCGATC ATCT GATCGGC GGTTTCGGTGAGGCC BRADO5595 5779808 - 5778810 - | branched chain amino acid ABC transporter permease BRADO5596 5780680 - 5779805 - | branched chain amino acid ABC transporter permease BRADO5597 5781894 - 5780755 - | branched chain amino-acid ABC transporter substrate-binding protein aroE 5782855 - 5781974 - | shikimate 5-dehydrogenase BRADO5599 5783920 - 5782979 - | LysR family transcriptional regulator BRADO5600 5787779 - 5783952 - | hypothetical protein TERM 3860 5783992 - 5784034 + g 87 -19.1 -2.62184 | gap 2 GGGATCGGCGGACGC GGCACGGGCCGCGGGCGCGGC GGC GCCGCGCCCGGCG-CCG-GCC TGATCTCGACCGGGG TERM 3861 5784797 - 5784820 + g 71 -14.6 -2.62184 | gap 1 TGACCAGTCCCTGCA CGCT-GCGGCC TTC GGCCGCCAGCG TCATCTGCGCCGAGA BRADO5601 5789213 - 5787954 - | putative cytochrome P450 BRADO5602 5790562 - 5789258 - | major facilitator superfamily permease BRADO5603 5792393 - 5791581 - | putative extradiol ring-cleavage dioxygenase BRADO5604 5793039 - 5792605 - | DoxD-like family protein TERM 3862 5792805 - 5792755 - G 79 -11.1 -3.9461 | overlap 5792781 GTTGTTGAAGAAGAA GCCG-GCCGAGCCGTGCACGGTG AAGATGG CGCCGAGCA-GGATCGGCACGGC GGCGAGCGCGACCCA TERM 3863 5793345 - 5793366 + G 83 -15.9 -3.53012 | GGCGCTATCTCGATC TCGCCGAGC GGGT GCTCGGCGA TTTCGAGGCCGCCGA TERM 3864 5793839 - 5793808 - g 78 -13.7 -3.61398 | gap 1, opp_overlap 5793829 CCTGCGCGCCAACAA CGGCGATGCGCTGC TCGCT GCGGCGC-TCGCCG GCCAGGGCCTGATCT BRADO5605 5793140 - 5794057 + | LysR family transcriptional regulator TERM 3865 5794252 - 5794264 + G 70 -10.5 -3.68936 | GCTCGGCGGCTTCGC GCCGG AAA CCGGC TTCTTCGCCTTCCTC TERM 3866 5794979 - 5795005 + G 75 -11.4 -3.6279 | CGCGATTTTCTCGGC GCCGGCGCGGGC AGC GTGCTCGCCGGC TTGTTCGGCACGTTT BRADO5606 5794091 - 5795845 + | sulfate transporter BRADO5607 5796167 - 5796406 + | hypothetical protein BRADO5608 5796653 - 5796940 + | putative signal peptide TERM 3867 5796989 - 5796957 - T 74 -13.3 -3.33696 | opp_overlap 5796960, overlap 5796958 CTGCGCGCGAACTAA GGCCGCCGCCGCATC CCG GATGCGGCGGCGTTT TCATTTGATGCTTTT TERM 3868 5796988 - 5796958 - T 80 -16.8 -2.60075 | opp_overlap 5796960, overlap 5796957 TGCGCGCGAACTAAG GCCGCCGCCGCATC CCG GATGCGGCGGCGTT TTCATTTGATGCTTT TERM 3869 5796960 - 5796986 + T 100 -23.8 -4.59376 | opp_overlap 5796958 5796957 CGCGCGAACTAAGGC CGCCGCCGCATC CCG GATGCGGCGGCG TTTTCATTTGATGCT BRADO5609 5798493 - 5797072 - | putative D-lactate dehydrogenase (D-lactate ferricytochrome C oxidoreductase) TERM 3870 5798421 - 5798435 + g 75 -9.2 -4.08767 | CGAAGCGGGCCGCGA GCGCGT CGA GCGCGC TTTTCAGCGCCTCCG BRADO5610 5798581 - 5799075 + | hypothetical protein BRADO5611 5800576 - 5799077 - | putative amidase BRADO5612 5800839 - 5801660 + | hypothetical protein TERM 3871 5801694 - 5801676 - f 100 -17.4 -4.06419 | opp_overlap 5801671 CGGTCGTACAAATAA GCCGGCGC AAG GCGCCGGC GGGAGTTGCGTCATG BRADO5613 5801707 - 5802468 + | putative metallo-beta-lactamase family protein BRADO5614 5802470 - 5803213 + | hypothetical protein TERM 3872 5803689 - 5803656 - g 73 -13.1 -3.28712 | gap 1, overlap 5803657 GCTGGTCGCCGAGAA GGTCAGCGGCGCGCAC GAC GT-CGCGCCGCTGTCG GTCATGCTGCGCGAT TERM 3873 5803688 - 5803657 - g 77 -16.6 -2.57132 | gap 1, overlap 5803656 CTGGTCGCCGAGAAG GTCAGCGGCGCGCAC GAC GT-CGCGCCGCTGTC GGTCATGCTGCGCGA BRADO5615 5803228 - 5803854 + | hypothetical protein BRADO5616 5804330 - 5805565 + | hypothetical protein TERM 3874 5805730 - 5805686 - T 100 -21.6 -4.57073 | gap 1, opp_overlap 5805685 5805694, overlap 5805687 5805688 GAGGTGCCCCAAAAA GCGCAAAGGGCGCAGCACCTC TTGC GAGGCACTGCGCCCTTCGC-C GACCTCATTGTCAGG TERM 3875 5805730 - 5805687 - T 100 -21.8 -3.33922 | opp_overlap 5805685 5805694, overlap 5805686 5805688 AGGTGCCCCAAAAAG CGCAAAGGGCGCAGCACCTC TTGC GAGGCACTGCGCCCTTCGCC GACCTCATTGTCAGG TERM 3876 5805729 - 5805688 - T 100 -25.3 -2.60032 | opp_overlap 5805685 5805694, overlap 5805686 5805687 GGTGCCCCAAAAAGC GCAAAGGGCGCAGCACCTC TTGC GAGGCACTGCGCCCTTCGC CGACCTCATTGTCAG BRADO5617 5805931 - 5805758 - | hypothetical protein TERM 3877 5806084 - 5806063 - H 72 -2.2 -4.68103 | gap 1, opp_overlap 5806070 5806074 5806081, overlap 5806064 5806065 TGAAGCGGAACAAAA CCGCCCGTG ATGGG CACGT-CGG CGCCGACGGCCCTCG TERM 3878 5806558 - 5806529 - g 73 -14.3 -3.19602 | gap 1, overlap 5806527 5806530 CGCGCGAGATGAAGA CGCGCCTCGCCGAG ATG CTCGGCCAGGCG-G TGGAGGGCATGCCAT TERM 3879 5806558 - 5806530 - g 71 -14.5 -2.51547 | overlap 5806529 5806527 GCGCGAGATGAAGAC GCGCCTCGCCGAG ATG CTCGGCCAGGCGG TGGAGGGCATGCCAT TERM 3880 5806771 - 5806813 + G 74 -5.5 -4.56597 | opp_overlap 5806771 5806770, overlap 5806772 5806801 5806807 GACGGCTGGAAGAAT CG-CGGCCTGGCGCCGGCG CAGGTGC CGTCGG-GCGAAGCCGCCG TTTTTGCCAACGGCA TERM 3881 5807151 - 5807097 - g 72 -14.3 -3.01712 | gap 1, overlap 5807131 GGGGCGGCTCGAAGA GGCGAGCCCGGAATCTCG-AGCTGAG GACC CACAACTGCGGGATTCCGGGTTCGCA CCTGACGGTGCGCTC uvrD 5806225 - 5808822 + | DNA helicase II BRADO5619 5808943 - 5809359 + | putative signal peptide BRADO5620 5809359 - 5810027 + | hypothetical protein BRADO5621 5810265 - 5810816 + | hypothetical protein TERM 3882 5811264 - 5811245 - g 73 -10.6 -3.66378 | TACACCCGATCCAAA GCGCTGGC CGAG GCCCGCGC CATGGCAGCAGCGGC BRADO5622 5810816 - 5811841 + | putative NAD dependent epimerase/dehydratase family protein BRADO5623 5811885 - 5812508 + | putative isoprenylcysteine O-methyltransferase family protein BRADO5624 5813565 - 5812522 - | hypothetical protein BRADO5625 5814416 - 5813682 - | putative signal peptide BRADO5626 5814407 - 5814628 + | hypothetical protein BRADO5627 5814693 - 5815613 + | putative ABC transporter (ATP binding protein) BRADO5628 5815610 - 5816371 + | putative ABC-2 type transporter (permease protein) BRADO5629 5816738 - 5816388 - | putative signal peptide BRADO5630 5817073 - 5817879 + | ErfK/YbiS/YcfS/YnhG family protein BRADO5631 5818123 - 5817974 - | fumarate hydratase class II (fragment) BRADO5632 5819165 - 5818140 - | putative sugar (D-ribose) ABC transporter (permease protein) BRADO5633 5820680 - 5819178 - | putative sugar (D-ribose) ABC transporter ATP-binding protein TERM 3883 5820006 - 5820053 + g 70 -13.5 -3.07291 | gap 3 CTGGTCGCGGGCCAG CGCGCCGACCATGCGGCCATCGCG CAG CACGATGGC-GC--GGTCGGCGCA TTGCATCACCTCGTT BRADO5634 5821647 - 5820694 - | putative sugar (D-ribose) ABC transporter (periplasmic binding protein) TERM 3884 5821761 - 5821790 + H 70 -7.8 -4.07568 | gap 2, overlap 5821761 CGGGACCTCCGCCTC GG-CGCCG-CCGGC ATCA GCCGGTCGTCGACC TTTTGAAAGCCACGA TERM 3885 5821908 - 5821861 - H 74 -9 -3.85698 | gap 1, opp_overlap 5821869 5821871 5821878, overlap 5821862 GCCGCTGCCGACAAA CGTGCCCCGC-TGCGAAGCCGCA TTC TGCGGTCTCTCATGAGGGGCGCA CCTCAGGTAGCATGG BRADO5636 5822329 - 5822583 + | putative Acyl carrier protein-like TERM 3886 5822753 - 5822795 + G 72 -11.9 -3.56837 | gap 2, overlap 5822768 5822770 AGAGCCCGCGACATG GCGGCGCGGCTCGCCGACCAC GCC GCGCCCGGCGA-CCGCGC-GC TTCTGGTGTTTCCGC BRADO5637 5822606 - 5824324 + | putative fatty-acid--CoA ligase (Acyl-CoA synthetase) BRADO5638 5825353 - 5824334 - | hypothetical protein TERM 3887 5824637 - 5824586 - GT 74 -13.1 -3.30441 | gap 3 CAGGATCCTGTAGAA GGTCG-GCGGC-ACCACCAG-CACGA CGC CCGTGTCCGGCAGCCGCCGCACGACC TGCTGCAAACGTTGC BRADO5639 5826704 - 5825322 - | putative membrane bound O-acyl transferase (MBOAT) family protein; putative alginate O-acetyltransferase TERM 3888 5825654 - 5825616 - GR 70 -7.3 -4.00038 | gap 2 CAGCACGACGAGAAA GGTCAGCAGCCAGCCGAGC CCC GC-CGGCAGTC-GCGGACC GAACCGACGCCACAG BRADO5640 5827694 - 5826744 - | putative Fatty-acid desaturase, transmenbrane protein BRADO5641 5830087 - 5827808 - | hypothetical protein BRADO5642 5830302 - 5831903 + | putative phytoene dehydrogenase family protein TERM 3889 5832077 - 5832048 - T 82 -10.8 -4.07687 | gap 1, opp_overlap 5832055, overlap 5832049 5832055 ATGGCCGCGCCAAAA GGAAAAACCGGGC TCGAG GCCCGG-TTCTCC GAGAACGCCGCTTGA TERM 3890 5832077 - 5832049 - T 71 -13.2 -3.04398 | opp_overlap 5832055, overlap 5832048 5832055 TGGCCGCGCCAAAAG GAAAAACCGGGC TCGAG GCCCGGTTCTCC GAGAACGCCGCTTGA TERM 3891 5832071 - 5832055 - T 100 -10.8 -5.0925 | opp_overlap 5832055, overlap 5832048 5832049 CGCCAAAAGGAAAAA CCGGGC TCGAG GCCCGG TTCTCCGAGAACGCC BRADO5643 5832261 - 5832097 - | putative Flp/Fap pilin component (modular protein) prmA 5832534 - 5833430 + | ribosomal protein L11 methyltransferase (L11 Mtase) BRADO5645 5833703 - 5833506 - | hypothetical protein TERM 3892 5834905 - 5834937 + G 79 -11.1 -3.93236 | overlap 5834931 GAGGGCACGCGACGC GCACACCGGCGCGAC GCC GTCGCCCTGGCGCGC TTTCTCGCCTTCATC BRADO5647 5833921 - 5835744 + | putative aminopeptidase P TERM 3893 5835789 - 5835769 - f 81 -13.9 -3.53811 | opp_overlap 5835753 CGTAGGGTGGGCAAA GCGGCCGCC GCA GGCGGCAGC GTGCCCACCGCGTCT BRADO5648 5836032 - 5837315 + | Bcr/CflA family drug resistance transporter ligA 5839855 - 5837705 - | DNA ligase (polydeoxyribonucleotide synthase [NAD+]) TERM 3894 5839192 - 5839136 - G 77 -12.1 -3.66844 | gap 1, opp_overlap 5839142, overlap 5839184 GGCATAGGCGAAGAA GCCGAGGGGCCGCGACGCCGTGATGG TCGGGT CCTTCT-GGCGCAACGACCCCGCGGC GGAGTTGCGGGGATT TERM 3895 5840004 - 5839968 - R 83 -17.2 -2.52896 | gap 1 TCACCCCCTAACTTA GGCCGCCGCCG-CCTCC AGCA GGCGGTCGGCGGCGGCG CGGGCTTCGGCGGTG recN 5841638 - 5839965 - | DNA repair protein RecN (recombination protein N) BRADO5651 5842653 - 5841760 - | TPR repeat-containing protein lpxC 5843993 - 5843034 - | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase TERM 3896 5844285 - 5844308 + r 93 -19.6 -3.02144 | opp_overlap 5844285 TCAGCCCAGCAAAAA GGCCCGGCTC TCAC GAGCCGGGCC TGTTCAGCACCCTCG TERM 3897 5844308 - 5844285 - R 100 -19.6 -4.7373 | opp_overlap 5844285 TCAGCCCAGCAAAAA GGCCCGGCTC TCAC GAGCCGGGCC TGTTCAGCACCCTCG ftsZ 5846183 - 5844339 - | cell division protein FtsZ ftsA 5847593 - 5846274 - | cell division protein ATPase TERM 3898 5847585 - 5847604 + g 79 -7.8 -4.4634 | opp_overlap 5847585 TGTCTGGCGATCGAA GCCGGTCA TGCG TCACCGGC TTTCTTCTTGGGCTT ftsQ 5848627 - 5847590 - | putative cell division protein FtsQ TERM 3899 5848419 - 5848457 + g 76 -14.5 -3.14132 | gap 1, opp_overlap 5848407 AGATCGACCACGCGC GGCGGCGCCTCGCGCCCG ACCA TGGGCGCCA-GCGCCGCG TTCATCGGCGCACGA TERM 3900 5848554 - 5848573 + g 72 -11.4 -3.61103 | gap 1, opp_overlap 5848538 TCGCGCAGCAGGATC GCCGC-GCC AAG GGCAGCGGC TTTCAGGTCAGCTTG ddlB 5849909 - 5848920 - | D-alanine-D-alanine ligase, affects cell division murB 5850901 - 5849978 - | UDP-N-acetylenolpyruvoylglucosamine reductase murC 5852309 - 5850906 - | UDP-N-acetylmuramate--L-alanine ligase murG 5853582 - 5852479 - | N-acetylglucosaminyl transferase TERM 3901 5853558 - 5853526 - G 86 -16.2 -3.53012 | overlap 5853528 5853530 CGCTTCGGCGGGAAA CAGATGGCCGCCGG TGCCG CCGGCGGCCAGCAG AATGAGAGGCGCAGA TERM 3902 5853556 - 5853528 - G 86 -17.4 -3.34398 | overlap 5853526 5853530 CTTCGGCGGGAAACA GATGGCCGCCGG TGCCG CCGGCGGCCAGC AGAATGAGAGGCGCA TERM 3903 5853554 - 5853530 - G 93 -18.6 -3.24232 | overlap 5853528 5853526 TCGGCGGGAAACAGA TGGCCGCCGG TGCCG CCGGCGGCCA GCAGAATGAGAGGCG ftsW 5854789 - 5853638 - | essential cell division protein (stabilizes FtsZ ring) TERM 3904 5854905 - 5854878 - R 93 -18.4 -3.28712 | opp_overlap 5854878 TGTCGTCCCGGACAA GCCGTGACGCGC GCCA GCGCGTCGCGGC GCCGACGACAGCGGA murD 5856330 - 5854930 - | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase TERM 3905 5855424 - 5855464 + g 73 -12.7 -3.40403 | gap 3, opp_overlap 5855408, overlap 5855431 CCTCTCTCACGCCGA T-CGC-GAGCGCGGCC-GCG GCGG CGCAGGCCGCGTTCTGCGCA TTGTGCTGGCCGCGC TERM 3906 5855431 - 5855455 + g 78 -15 -3.34233 | gap 1, opp_overlap 5855408, overlap 5855424 CACGCCGATCGCGAG CGCGGCC-GCG GCGG CGCAGGCCGCG TTCTGCGCATTGTGC mraY 5857545 - 5856439 - | phospho-N-acetylmuramoyl-pentapeptide-transferase TERM 3907 5857131 - 5857095 - G 73 -13.7 -3.09516 | opp_overlap 5857115 5857119 5857125, overlap 5857123 5857124 GCGCGTAGCAGGCAA CGAGCGCGATCGCCG CCTCGAT CAGCAATCGCGCACG TCCGGCAAAGCCGGA murF 5859105 - 5857729 - | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase (UDP-MurNAc-pentapeptide synthetase, D-alanyl-D-alanine-adding enzyme) TERM 3908 5857996 - 5857942 - G 70 -4.1 -4.52589 | gap 1, overlap 5857944 CGGCCCGACACAAAA GACGCCGTC-GATGCCGGCGAGATGG CCGA CCATCTTGGCGTGATAGGCCGGCGCC TCGTCGCCAAGCTCC TERM 3909 5857960 - 5857944 - G 71 -9.3 -3.87627 | overlap 5857942 GCCCGACACAAAAGA CGCCGTC GAT GCCGGCG AGATGGCCGACCATC TERM 3910 5858933 - 5858911 - G 70 -11.2 -3.53811 | GGCATTGGCGGCAAA CTCCCAGCCG TCG CGGCTGGAGG CGAAGCTCGATACGA murE 5860562 - 5859102 - | UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase ftsI 5862382 - 5860634 - | division-specific transpeptidase, penicillin-binding protein BRADO5666 5862771 - 5862379 - | hypothetical protein mraW 5863770 - 5862775 - | S-adenosyl-dependent methyl transferase BRADO5669 5864268 - 5865119 + | N-acetylmuramoyl-L-alanine amidase BRADO5670 5866377 - 5865124 - | putative RNA polymerase sigma factor BRADO5671 5866755 - 5866402 - | hypothetical protein TERM 3911 5867082 - 5867064 - R 76 -8.8 -4.15106 | overlap 5867076 CAGTAAGGGTGAAAA GGTGCGGT AAG AGCGCACC GCGGGACCGGCAACG TERM 3912 5867323 - 5867363 + r 100 -21.9 -4.13767 | GGCCGGCTGATATGT TCATGAGGGGCTCGGCGCT GAC AGCGCCGGGCCCCTCACCA TTTTAGCCTGCGGCC BRADO5672 5869183 - 5867366 - | multidrug ABC transporter ATPase/permease BRADO5673 5871092 - 5869503 - | putative multidrug resistance protein B (drug efflux transporter, EmrB-like) BRADO5674 5872631 - 5871288 - | putative multidrug resistance protein A (drug efflux transporter, EmrA-like) TERM 3913 5872652 - 5872674 + H 76 -10.4 -3.90744 | opp_overlap 5872653 5872654, overlap 5872653 5872671 5872673 ACTCCCACCCATCAA AGCGGGGCCG CCC CGGCCCCGGA TTATTTGACCGAACC TERM 3914 5872673 - 5872653 - H 84 -13.9 -3.76224 | opp_overlap 5872652 5872653 5872671, overlap 5872654 CTCCCACCCATCAAA GCGGGGCCG CCC CGGCCCCGG ATTATTTGACCGAAC TERM 3915 5872653 - 5872673 + H 74 -13.9 -2.94232 | opp_overlap 5872653 5872654, overlap 5872652 5872671 CTCCCACCCATCAAA GCGGGGCCG CCC CGGCCCCGG ATTATTTGACCGAAC TERM 3916 5872672 - 5872654 - H 87 -17.4 -2.8552 | opp_overlap 5872653 5872652 5872671, overlap 5872653 TCCCACCCATCAAAG CGGGGCCG CCC CGGCCCCG GATTATTTGACCGAA TERM 3917 5872678 - 5872735 + H 88 -16 -3.26745 | opp_overlap 5872688 5872692, overlap 5872673 5872671 5872679 5872679 5872706 5872708 CCCGGCCCCGGATTA T-TTGACCGAACCGATCGGTCAATTGAT CTGT ATCA-TTGACCGAACCGTTCGGTCAATA TATATTTCGCGTGTG TERM 3918 5872679 - 5872733 + H 95 -21.1 -3.19285 | gap 1, opp_overlap 5872688 5872692, overlap 5872679 5872673 5872671 5872678 5872706 5872708 CCGGCCCCGGATTAT TTGACCGAACCGATCGGTCAATTGAT CTGT ATCA-TTGACCGAACCGTTCGGTCAA TATATATTTCGCGTG TERM 3919 5872706 - 5872739 + H 70 -9.9 -3.63627 | gap 1, opp_overlap 5872692 5872688, overlap 5872671 5872679 5872678 5872708 ATCGGTCAATTGATC TGTATCATTGACCGAA CCG TTCGGTCAAT-ATATA TTTCGCGTGTGCAAC TERM 3920 5873298 - 5873276 - g 70 -12 -3.38224 | opp_overlap 5873263 5873262, overlap 5873274 AGTCGAGGCGAAACA GCTGGCGATC GAC GATTGCCAGC TCGCCGCCTCGCAAT BRADO5675 5872818 - 5873450 + | TetR family transcriptional regulator TERM 3921 5873597 - 5873583 - T 71 -12.8 -3.05816 | GGAGGGCGCAGGGAA GGCCGG GCG CCGGCC GCGCCCGTGGCCCGC BRADO5676 5875123 - 5874626 - | transcriptional regulator BRADO5677 5875302 - 5877632 + | putative iron transport outer membrane receptor TERM 3922 5877751 - 5877775 + T 77 -13.6 -3.28712 | opp_overlap 5877749, overlap 5877745 5877743 5877742 GCTGCGCGAGAGAGC GCCCTCTCTC CTTGT GGGAGAGGGC TTGTAGGACGGCGCC BRADO5678 5878219 - 5877956 - | hypothetical protein BRADO5679 5879699 - 5878512 - | putative extensin-like protein TERM 3923 5879801 - 5879815 + H 83 -7.8 -4.56597 | overlap 5879789 5879788 GATCGACGCGCTCAC GGCAGC GTC GCTGTC TTTTTCGGGCGAAGC BRADO5680 5879884 - 5879967 + | hypothetical protein BRADO5681 5880099 - 5880863 + | hypothetical protein TERM 3924 5880890 - 5880922 + T 90 -15.6 -3.75153 | TCGTCAGCGATGCGA GACCCCGCCGGG ACCAGTCCC TCCGGCGGGGTC TTTCGCTTACGCCAC BRADO5682 5882314 - 5880929 - | putative two component sensor histidine kinase BRADO5683 5883071 - 5882304 - | OmpR family two component response transcriptional regulator TERM 3925 5883535 - 5883583 + G 73 -13 -3.35046 | gap 2, overlap 5883531 GTCGCCGCGGCCAAG GCGCGTAT-CCGCGAGGCGC-GCG CGA CGCAGCGCCAGGCGGTGGGCGCGC TGTTTCCGACCGTCA BRADO5684 5883289 - 5884776 + | multidrug efflux system outer membrane subunit macA 5884811 - 5886103 + | putative accessory protein to ABC-type macrolide transport protein MacB macB 5886100 - 5888064 + | macrolide ABC transporter ATP-binding/membrane protein TERM 3926 5888182 - 5888166 - T 72 -8 -4.24342 | TTGCGGACGAAGAAA GACGAC GCAGA GTCGTC CACCAATTCACATCA BRADO5687 5889161 - 5888274 - | hypothetical protein TERM 3927 5888744 - 5888770 + g 79 -13.6 -3.68351 | overlap 5888746 CGACCTTTGAGGCGC CCGCCGCGACCG GAT CCGTCGCGGCTG TTTGCGTGATGAACG TERM 3928 5888746 - 5888768 + g 80 -14.8 -3.42395 | overlap 5888744 ACCTTTGAGGCGCCC GCCGCGACCG GAT CCGTCGCGGC TGTTTGCGTGATGAA BRADO5688 5890202 - 5889324 - | DMT family permease BRADO5689 5892490 - 5890286 - | putative xanthine dehydrogenase (YagR-like), molybdenum binding subunit BRADO5690 5893511 - 5892495 - | putative xanthine dehydrogenase (YagS-like), FAD binding subunit TERM 3929 5893101 - 5893119 + g 72 -11.6 -3.61715 | GTCGATGGCCGAGCA GCCCGCGC CCG GCGCGCGC TTGTTGCAGGGCGTG TERM 3930 5893358 - 5893392 + g 75 -15.8 -2.78547 | overlap 5893346 5893355 5893379 TGAGCGGCAGGCGGC TGATGTCGATCAGCCG GCG CGGCTGTTCGACATGA TACTTCATCAGGTCG BRADO5691 5894032 - 5893508 - | putative xanthine dehydrogenase YagT-like, iron-sulfur binding subunit TERM 3931 5894146 - 5894196 + r 85 -10.4 -4.36914 | overlap 5894148 CGCGGTCGCTTCCGC TCCGGCGCGAGGTTCGG-CGGGCT CAGGC AGCCCGGCCGAGCCAGGC-CCGCA TTTTCTGCGCCAGGC BRADO5692 5895190 - 5894168 - | putative NUDIX hydrolase (modular protein) TERM 3932 5894417 - 5894433 + g 82 -11.5 -4.07568 | overlap 5894382 GATCGCAGCCTCGGG CGCGGCC ACC GGCTGCG TTTTCGGCGGCGCCG BRADO5693 5896173 - 5895298 - | putative phosphatidylserine decarboxylase (psd-like) TERM 3933 5896415 - 5896448 + G 77 -12.5 -3.63515 | gap 1 CCGCTCCGACGGCGC GCCG-CCTGACGTC GCGACCA GGCGTCAGGACGGC TTCTTCCGGCTCGGC BRADO5694 5896209 - 5897873 + | putative glutamate-1-semialdehyde 2, 1-aminomutase (GSA) (glutamate-1-semialdehyde aminotransferase) TERM 3934 5898099 - 5898068 - T 89 -14.5 -3.89881 | gap 1, overlap 5898070 5898071 AGCAATCCCCACAAA CACCGATGCCCGGG ACTGG CCCGGGCATC-GCG ACACTTCAGACTTCG TERM 3935 5898098 - 5898070 - T 89 -16 -3.5362 | overlap 5898068 5898071 CAATCCCCACAAACA CCGATGCCCGGG ACTGG CCCGGGCATCGC GACACTTCAGACTTC TERM 3936 5898097 - 5898071 - T 90 -19.5 -2.7169 | overlap 5898070 5898068 AATCCCCACAAACAC CGATGCCCGGG ACTGG CCCGGGCATCG CGACACTTCAGACTT BRADO5695 5898754 - 5898122 - | hypothetical protein TERM 3937 5898833 - 5898805 - R 75 -11.8 -3.53811 | overlap 5898806 GGGATTCGGTGTAAA TCGTGTGACATC ATCAA GATGTCACACGG TCGGACGCAAGGAAA TERM 3938 5898832 - 5898806 - R 78 -15.3 -2.72144 | overlap 5898805 GGATTCGGTGTAAAT CGTGTGACATC ATCAA GATGTCACACG GTCGGACGCAAGGAA BRADO5696 5899576 - 5898899 - | putative phosphatidylethanolamine-N-methyltransferase (PmtA-like) BRADO5697 5900701 - 5899640 - | putative glycosyl transferase (group 1) TERM 3939 5901476 - 5901447 - g 77 -4.2 -4.77036 | gap 1 GTCGATCACCAAAAA GGCGG-AATGGCC GGACT GGACACCGCCGCC GGAGATGATCGCCCG BRADO5698 5901049 - 5901747 + | putative ErfK/YbiS/YcfS/YnhG precursor TERM 3940 5901785 - 5901814 + F 95 -11.4 -4.42806 | gap 1, overlap 5901786 GGATCCTCCCTGACT GGACCGCCGCGGC CCCGT GCC-CGGCGGTCA TTTCTTTGCGCATGC TERM 3941 5901786 - 5901813 + F 80 -14.9 -3.25202 | gap 1, overlap 5901785 GATCCTCCCTGACTG GACCGCCGCGGC CCCGT GCC-CGGCGGTC ATTTCTTTGCGCATG BRADO5699 5901820 - 5901993 + | junctophilin-4 (junctophilin-like 1 protein) (fragment) BRADO5700 5901990 - 5903627 + | hypothetical protein BRADO5701 5903825 - 5903986 + | putative Flp/Fap pilin component TERM 3942 5904683 - 5904644 - g 82 -15.8 -3.41527 | gap 1, overlap 5904650 CAACTGGTACGACAA CGAGAAGGTCGACGCGATC TTC GA-CGTGCCGACCTCCTCG GTCGCGCTGCCGATC TERM 3943 5905107 - 5905067 - g 73 -12.5 -3.39327 | opp_overlap 5905105 CGGCGACACCCAGAA CGCGCTGAAGCAGGCCG CCGAGTT CGGCCTGGCCCAGAGCG GCCAGAAGATGATCG BRADO5702 5904360 - 5905571 + | putative ABC branched-chain amino transporter, periplasmic binding protein BRADO5703 5906014 - 5906754 + | OmpR family two component response transcriptional regulator BRADO5704 5906778 - 5908181 + | putative two component sensor histidine kinase; putative osmolarity sensor TERM 3944 5908212 - 5908190 - T 100 -20.6 -3.70902 | GGCCTGATACGCAAA CGCGCCCGGA TGG TCCGGGCGCG CCGCGTCGAGACAAT BRADO5705 5908786 - 5908250 - | hypothetical protein BRADO5706 5909359 - 5909111 - | hypothetical protein BRADO5707 5910993 - 5909512 - | hypothetical protein TERM 3945 5911826 - 5911849 + G 75 -13.8 -3.34398 | overlap 5911825 TACCGCGCCGCCCAT GGCGACCACG ACCG CGCGGTCGCC TATTTCGCCAAGGGC BRADO5708 5911208 - 5911990 + | hypothetical protein thiO 5912167 - 5913180 + | thiamine biosynthesis oxidoreductase thiO thiS 5913171 - 5913368 + | thiamine biosynthesis protein ThiS thiG 5913697 - 5914479 + | thiazole synthase thiE 5914466 - 5915074 + | thiamine phosphate pyrophosphorylase (thiamin phosphate synthase/diphosphorylase) TERM 3946 5915151 - 5915108 - f 100 -24 -3.06183 | opp_overlap 5915113 5915117, overlap 5915113 5915117 GTCATTGCGAGCGAA GCGAAGCAATCCAGGGCCGC GCGT GCCGCCCTGGATTGCTTCGT CGCTACGCTCCTCGC TERM 3947 5915113 - 5915146 + F 95 -21.1 -3.18582 | opp_overlap 5915108 5915113 5915117, overlap 5915117 TGCGAGCGAAGCGAA GCAATCCAGGGCCGC GCGT GCCGCCCTGGATTGC TTCGTCGCTACGCTC TERM 3948 5915146 - 5915113 - f 95 -21.1 -3.19192 | opp_overlap 5915113 5915117, overlap 5915108 5915117 TGCGAGCGAAGCGAA GCAATCCAGGGCCGC GCGT GCCGCCCTGGATTGC TTCGTCGCTACGCTC TERM 3949 5915117 - 5915142 + F 83 -14.7 -3.40867 | opp_overlap 5915113 5915108 5915117, overlap 5915113 AGCGAAGCGAAGCAA TCCAGGGCCGC GCGT GCCGCCCTGGA TTGCTTCGTCGCTAC TERM 3950 5915142 - 5915117 - f 83 -14.7 -3.40788 | opp_overlap 5915117 5915113, overlap 5915113 5915108 AGCGAAGCGAAGCAA TCCAGGGCCGC GCGT GCCGCCCTGGA TTGCTTCGTCGCTAC TERM 3951 5915705 - 5915725 + G 74 -12.5 -3.55761 | opp_overlap 5915681 5915682 GAGCGCGCCGAGGCC GCGCTCGCC GAC GGCGAGAGC TTTGGCGCGTCGGTC thiC 5915213 - 5917114 + | thiamine biosynthesis protein ThiC TERM 3952 5917144 - 5917188 + F 100 -16.5 -5.68438 | gap 1, opp_overlap 5917171, overlap 5917164 CTCTCCATCGTCATG GCCGGGCTTG-ACCCGGC CATCCATCAA GCCGGGCGCAAGCCCGGC TTTTTTGTTTGATGA TERM 3953 5917164 - 5917195 + F 71 -8.6 -3.84246 | opp_overlap 5917171, overlap 5917144 GCTTGACCCGGCCAT CCATCAAGCCGGGC GCAA GCCCGGCTTTTTTG TTTGATGATTAGACC TERM 3954 5917188 - 5917171 - f 76 -14.1 -3.18264 | opp_overlap 5917144 5917164 CCGGCCATCCATCAA GCCGGGC GCAA GCCCGGC TTTTTTGTTTGATGA BRADO5714 5917280 - 5917666 + | putative translation initiation inhibitor TERM 3955 5917759 - 5917785 + F 81 -13.6 -3.53811 | overlap 5917750 GCTGCACGACGGTGG GCACGCGACCGC CCT GCGGGCGCCTGC TTTGCCCACCCTACG BRADO5715 5918033 - 5918287 + | hypothetical protein TERM 3956 5918388 - 5918400 + F 71 -6.2 -4.37092 | opp_overlap 5918372, overlap 5918387 5918388 CAGCGCCAGCGTCTT GCGC CGCGC GCGC TTTTGTCGCACCACT BRADO5717 5918497 - 5918766 + | hypothetical protein BRADO5718 5919417 - 5918797 - | putative glutathione S-transferase (gstA/gst-like) TERM 3957 5919505 - 5919471 - H 81 -12.9 -3.80018 | gap 1, opp_overlap 5919479 CTGACAGATCAACAA CGCCGGCCGCCATCAA TGGC TTGTT-GCGACCGGCG CAATAATGCGACAAC TERM 3958 5919877 - 5919855 - g 84 -7 -4.77036 | TTTCACCAGCAAAAA GGCCGCAA GCCTGTT TTACGGCC GGCCGACCGGCGCGA BRADO5719 5919526 - 5920065 + | putative G/U mismatch-specific DNA glycosylase (mug-like) BRADO5720 5920981 - 5920541 - | hypothetical protein TERM 3959 5921637 - 5921661 + G 75 -14.2 -3.31792 | GTCCCCCTCATTGTG CCACCGCCGC CGTCC GCGGCGGAGG TTCTGCCGCTGCTGA BRADO5721 5921580 - 5921849 + | putative transcriptional regulator (helix-turn-helix, Fis-type) TERM 3960 5922083 - 5922025 - g 71 -14.6 -2.63252 | gap 3, overlap 5922022 5922024 AGTGGCGAAGAATAC GGCCGGAC-GCGGCCTGCAGGGCCCCGTG GGTC CACGAGGCCC-GCAAGG-GCAGCCCGGGC GGCGCGGACCTGATG BRADO5722 5922011 - 5922565 + | putative collagen-like protein BRADO5723 5922868 - 5922596 - | hypothetical protein BRADO5724 5922962 - 5924023 + | hypothetical protein BRADO5725 5924042 - 5924395 + | hypothetical protein BRADO5726 5924420 - 5924836 + | hypothetical protein BRADO5727 5924865 - 5925470 + | hypothetical protein BRADO5728 5925635 - 5926759 + | putative cation efflux membrane fusion protein (CusB-like) BRADO5729 5926756 - 5929830 + | putative cation efflux system protein (CzcA/CusA-like) BRADO5730 5929827 - 5930138 + | hypothetical protein bfr 5930724 - 5930239 - | bacterioferritin (iron storage homoprotein) BRADO5732 5931130 - 5930846 - | putative bacterioferritin-associated ferredoxin (BFD-like) BRADO5733 5931558 - 5931292 - | putative glycine-rich cell wall protein BRADO5734 5931723 - 5932061 + | hypothetical protein BRADO5735 5932284 - 5932565 + | hypothetical protein TERM 3961 5932594 - 5932613 + T 100 -16.4 -4.7497 | TCTCCATGCGGCAGA GCCCGGCC CTGC GGCCGGGC TTTTTGCTGGCTGCG BRADO5736 5933887 - 5932649 - | putative transglycosylase TERM 3962 5932744 - 5932727 - G 74 -12.7 -3.53012 | GGCGTTCTTCTGAAA CGTGCCG AGCG CGGCACG CGTCTGCATCCCCGC BRADO5737 5934092 - 5933892 - | hypothetical protein BRADO5738 5934730 - 5934149 - | hypothetical protein BRADO5739 5936524 - 5934875 - | putative ABC transporter ATP-binding protein BRADO5740 5936827 - 5937045 + | hypothetical protein TERM 3963 5937611 - 5937655 + G 89 -17.2 -3.60296 | gap 1, opp_overlap 5937586 5937585, overlap 5937612 ACGCTCGGCATCCTC GGCCTCGGCAAGCTCGGC-AC CAAG GTCGCCGGGCTTGCCAAGGCG TTTGGCATGAACGTG TERM 3964 5937612 - 5937654 + G 95 -20.7 -2.75963 | gap 1, opp_overlap 5937586 5937585, overlap 5937611 CGCTCGGCATCCTCG GCCTCGGCAAGCTCGGC-AC CAAG GTCGCCGGGCTTGCCAAGGC GTTTGGCATGAACGT BRADO5741 5937152 - 5938114 + | putative phosphoglycerate dehydrogenase (PGDH), serA-like TERM 3965 5938153 - 5938134 - T 100 -13.6 -4.67038 | opp_overlap 5938136 CTCCCAAAAGCAAAA CACCCTCC GCGA GGAGGGTG TTGCGAGATCGATCA BRADO5742 5939418 - 5938177 - | hypothetical protein TERM 3966 5940649 - 5940606 - g 89 -10.3 -4.57073 | gap 3, overlap 5940608 CAGGCGCGGGAAAAA CAGCT-CGCGGCGCGCCG-TGC CAA GCAGCGGCGCTACGCGCAGC-G CGCAAAGGCGGCCCG TERM 3967 5940648 - 5940608 - g 84 -14 -3.90048 | gap 2, overlap 5940606 GGCGCGGGAAAAACA GCT-CGCGGCGCGCCG-TGC CAA GCAGCGGCGCTACGCGCAGC GCGCAAAGGCGGCCC BRADO5743 5939784 - 5940782 + | hypothetical protein sseA 5941649 - 5940792 - | 3-mercaptopyruvate sulfurtransferase TERM 3968 5941745 - 5941725 - R 74 -14 -2.94912 | overlap 5941727 TGTCGAAGCGATAGA CACGCGGG TCAAG CCCGCGTG TGACGAGTTGGGCTC BRADO5745 5942172 - 5941759 - | hypothetical protein BRADO5746 5943477 - 5942302 - | hypothetical protein TERM 3969 5943499 - 5943545 + H 81 -7.1 -4.80882 | gap 1, opp_overlap 5943488, overlap 5943504 TAGATCGCGCGGCCC GGAGGGCGCGTCAAGGGCCGCC GCGC GCCTGCCCTGGAC-CGCGCTGC TTTTTGCTCTACAAT BRADO5747 5943580 - 5943837 + | putative transglycosylase-associated protein TERM 3970 5943821 - 5943840 + F 75 -3.6 -4.87291 | overlap 5943802 TCGTGATCCTCTCCT TGATCAGG CGCG CTTGATTA TTTTTCCTTCCGATG BRADO5748 5943942 - 5944784 + | ATPase TERM 3971 5944809 - 5944823 + T 73 -11.4 -3.57561 | opp_overlap 5944787, overlap 5944801 GCGCCGAGGGCTGGC GGTGCC GCC GGCACC TTTCAGCCCTTGGAC BRADO5749 5945965 - 5944826 - | major facilitator superfamily permease TERM 3972 5946590 - 5946613 + G 70 -10.2 -3.70902 | gap 1 GACCATTGCCTCCAG GGCCGCAGCGC GTG GCGA-GCGGCC TTTCGATGTCGAGGA BRADO5750 5946183 - 5946770 + | TetR family transcriptional regulator BRADO5751 5947179 - 5946808 - | putative response regulator receiver (CheY-like protein) BRADO5752 5950867 - 5947172 - | sensor histidine kinase TERM 3973 5949955 - 5949902 - G 79 -6.7 -4.67904 | gap 1, overlap 5949903 5949904 CATCAACTCGAAAAA CCCCTGATGTTCGGCATCAAGC-GCG CGA CGCGGATTGACGCCGCAGATCAAGAT CGCCGTCGGCCGCTC BRADO5753 5951107 - 5952618 + | putative ATPase TERM 3974 5952616 - 5952650 + T 93 -18.7 -3.16564 | gap 1 GTCACCTCTTCGTCT TGACGATGCGCCCGGA TCGC TCCGGGCGCATCG-CG TTGGTAAAGTCCGCG plcN 5954796 - 5952667 - | non-hemolytic phospholipase C precursor (PLC-N) (phosphatidylcholine cholinephosphohydrolase) (phosphatidylcholine-hydrolyzing phospholipase C) (PC-PLC) TERM 3975 5955687 - 5955636 - g 83 -15.8 -3.50853 | gap 1, opp_overlap 5955654 5955685 CGCGGTCAAGGACAA GCCGCAGCTCGCCGGCATCGCTG CGATGAT CAGCGCCGCGGCCGAGC-GCGGC GCGGACCTGACCCGG BRADO5755 5955175 - 5956647 + | sensor histidine kinase TERM 3976 5957663 - 5957650 - g 73 -3.7 -4.63527 | overlap 5957651 GGACGATCCGAAAAA GCCGC CGCT GTGGC AGGTGAAGGGGGCGC BRADO5756 5957057 - 5959531 + | putative organic solvent tolerance protein (OstA) TERM 3977 5959688 - 5959669 - T 71 -13.6 -2.52896 | TCACGGCGTAATGGA TCGTCCGC CTGC GCGGACGA TGACGGTGGAGATCT BRADO5757 5960929 - 5959751 - | putative cytochrome P450 monooxygenase BRADO5758 5961812 - 5961021 - | LuxR family transcriptional regulator BRADO5759 5961993 - 5963141 + | putative amino-acid ABC transporter, periplasmic substrate-binding protein BRADO5760 5965089 - 5963455 - | putative choline (or alcohol) dehydrogenase TERM 3978 5964405 - 5964442 + g 77 -16.3 -2.54523 | gap 1, overlap 5964393 AGCGCACGCCGACAG CGCGCTTGCCTTCGAGCA TGA TGCTCGT-GGCATGCGCG TGGGTTCGGATCTCG BRADO5761 5965746 - 5965153 - | putative N-acetyltransferase (GCN5-related) TERM 3979 5965823 - 5965782 - R 90 -20.3 -2.54193 | opp_overlap 5965786 5965790, overlap 5965756 5965786 5965790 GAGGAGCGCAAGCGA CGAAGCAATCCAGAAGCGC GTGC GCGGCCCTGGATTGCTTCG CTGACGCTCGCAATG TERM 3980 5965819 - 5965786 - R 76 -13.9 -3.22091 | opp_overlap 5965786 5965790, overlap 5965782 5965790 AGCGCAAGCGACGAA GCAATCCAGAAGCGC GTGC GCGGCCCTGGATTGC TTCGCTGACGCTCGC BRADO5762 5966786 - 5965860 - | putative gluconolactonase BRADO5763 5967789 - 5966950 - | transcriptional regulator BRADO5764 5968128 - 5967868 - | hypothetical protein TERM 3981 5967911 - 5967924 + g 74 -5.2 -4.45738 | GACGCATCTTTGGCC GCCG CAGAGT CGGC TTTCTTCTTCAGCTC TERM 3982 5968408 - 5968383 - g 73 -3.9 -4.58395 | gap 1, overlap 5968385 GCTACGCGCGAAAAA CGGCTGGCG-CA ATT TGACGGCAGCGG TGAGCCACCGCCCGG BRADO5765 5968365 - 5968637 + | hypothetical protein TERM 3983 5968644 - 5968670 + T 78 -14.4 -3.0264 | TCTTATTGATCCCAC CGGGCCCTGAGT TCG GCTCAGGGCCGG TCTTGCCGAAAATTT TERM 3984 5969238 - 5969209 - T 100 -21.5 -3.17901 | ACATGCTGAAGCGAA GCATCCGGCCGCG CAAG CGCGACCGGATGC CAGACGTTAACGGAG BRADO5766 5969709 - 5969275 - | hypothetical protein BRADO5768 5970721 - 5970065 - | putative maleylacetoacetate isomerase (MAAI) (glutathione S-transferase) BRADO5769 5970906 - 5972126 + | putative Poly-beta-hydroxyalkanoate/butyrate (PHA/PHB) depolymerase TERM 3985 5972168 - 5972210 + T 74 -14.1 -2.88758 | GGTCAGTTCGTGAGC GGACCTCGGCCACGCTGCA CGCGC TGCAGCGTGGCTGACGGCG TCTCTCCGAACTTGT BRADO5770 5973204 - 5972155 - | AraC/XylS family transcription factor TERM 3986 5973366 - 5973356 - g 75 -4.6 -4.65168 | ACCACACTGGAAAAA GGCA TCA CGCC CGCCGGCACCGGCTA BRADO5771 5973338 - 5973787 + | putative polyketide biosynthesis protein BRADO5772 5974070 - 5975557 + | putative dimethylaniline monooxygenase (N-oxide-forming); putative exported protein BRADO5773 5975768 - 5976562 + | putative ABC transporter, periplasmic substrate-binding protein BRADO5774 5977444 - 5976647 - | putative periplasmic-binding protein; putative amino-acid periplasmic-binding protein TERM 3987 5976716 - 5976706 - G 72 -8.2 -4.07687 | opp_overlap 5976686 5976706 AGGCCTTCTTCAAAA GGCC GTT GGCC TTTGCCTCGGTCATG TERM 3988 5977561 - 5977539 - R 89 -14.8 -3.89412 | ACGCAAAGCAGCAAA CGGCGCGCGA AAC TTGCGCGCCG CGATTACCGTTTCCA BRADO5775 5977849 - 5977610 - | hypothetical protein BRADO5776 5978907 - 5978005 - | hypothetical protein TERM 3989 5978767 - 5978737 - G 85 -16 -3.6682 | opp_overlap 5978736 5978735 CTGCAGGCATTGAAA CGCCGGCGCGCCGC CGG GCGGCACGCTGGAG CATTTCGCCATGTAG TERM 3990 5979066 - 5979044 - RH 75 -14.8 -2.70932 | GTCTGCTCGGAATGA GCGCGGAAGC TGC GCTGCCGCGC GCGGCTCGGCAAGTG BRADO5778 5981897 - 5981100 - | putative periplasmic-binding protein; putative amino-acid periplasmic-binding protein BRADO5777 5979288 - 5981837 + | AcrB family metabolite exporter BRADO5779 5983172 - 5981964 - | major facilitator superfamily permease BRADO5780 5983235 - 5984038 + | AraC family transcriptional regulator TERM 3991 5984063 - 5984079 + F 77 -4.3 -4.84492 | overlap 5984058 CCTGCATGCAGGCGC CGCCGAC GGC GTTGACG TTTTGTTATGGTTGA BRADO5781 5984168 - 5985517 + | putative malonyl-CoA decarboxylase (MCD) TERM 3992 5985659 - 5985610 - T 100 -20.1 -3.78953 | opp_overlap 5985618 5985622, overlap 5985614 ATTGCGAGGAGCAAA GCGACGAAGCAATACAGGGCTTC GCGC GCAGCCCTGGATTGCTTCGCTGC GCTCGCAATGACGCC TERM 3993 5985655 - 5985614 - T 90 -20.3 -2.68775 | opp_overlap 5985618 5985622, overlap 5985610 CGAGGAGCAAAGCGA CGAAGCAATACAGGGCTTC GCGC GCAGCCCTGGATTGCTTCG CTGCGCTCGCAATGA TERM 3994 5985618 - 5985651 + T 75 -13.9 -3.06796 | opp_overlap 5985614 5985610, overlap 5985622 GAGCAAAGCGACGAA GCAATACAGGGCTTC GCGC GCAGCCCTGGATTGC TTCGCTGCGCTCGCA TERM 3995 5985992 - 5985943 - T 100 -23.7 -3.78953 | opp_overlap 5985951 5985955, overlap 5985947 ATTGCGAGGAGCAAA GCGACGAAGCAATCCAGGGCCTC GCGC GCAGCCCTGGATTGCTTCGCTGC GCTCGCAATGACGCC TERM 3996 5985988 - 5985947 - T 100 -23.9 -2.68775 | opp_overlap 5985951 5985955, overlap 5985943 CGAGGAGCAAAGCGA CGAAGCAATCCAGGGCCTC GCGC GCAGCCCTGGATTGCTTCG CTGCGCTCGCAATGA TERM 3997 5985951 - 5985984 + T 81 -15.3 -3.06796 | opp_overlap 5985947 5985943, overlap 5985955 GAGCAAAGCGACGAA GCAATCCAGGGCCTC GCGC GCAGCCCTGGATTGC TTCGCTGCGCTCGCA TERM 3998 5986617 - 5986632 + T 72 -7.6 -4.18161 | opp_overlap 5986617 CGATGAGGCAGGACA TCAGCA ATAT TGCTGA TTTTCGGAATTTGTC BRADO5782 5987116 - 5986706 - | hypothetical protein BRADO5783 5987618 - 5987319 - | hypothetical protein BRADO5785 5988111 - 5987737 - | hypothetical protein TERM 3999 5988284 - 5988249 - R 70 -12.6 -2.90688 | gap 1 CAATCATCGTAGATA GC-GCTTCAGCCGAACG CCT CATTCGGCCGCAGCCGC AGCAGGGACACTGGT BRADO5786 5989309 - 5988254 - | hypothetical protein TERM 4000 5988620 - 5988633 + g 72 -5.2 -4.33675 | opp_overlap 5988620, overlap 5988614 CAGGTGCAGCCAGAA GCCG AAGTCG CGGC TTTTGCTGGTGTAGT TERM 4001 5989685 - 5989728 + r 84 -16.7 -3.06183 | opp_overlap 5989694 GAGCGGAGCGGCGGA GCGACGCAATCCAGCGTCC TCGCTC GGCCCCTGGATCGCGTCGC TTCGCTCGCGATGAC BRADO5787 5990040 - 5989792 - | hypothetical protein gpx 5990513 - 5990037 - | glutathione peroxidase BRADO5789 5991907 - 5990513 - | amidase TERM 4002 5990959 - 5991012 + g 82 -16.8 -2.82193 | gap 3 GCTGCGCCTCGTAGC CGTCGCCGA-GCCAGA-GCCGCGTCTG CAG CAG-CGCGGCCTCCTGCATCGGCGGCG TGTCCTGGATCTCCT TERM 4003 5992158 - 5992136 - H 95 -10.6 -4.57482 | overlap 5992138 TGACGGAGAAACAAA CTCGCCAC GCGCCAT GTGGCGAG GAGCGGTCGCCAACA BRADO5790 5992310 - 5993413 + | hypothetical protein BRADO5791 5993632 - 5994066 + | putative globin-like protein BRADO5792 5994357 - 5994100 - | hypothetical protein pqqA 5994661 - 5994741 + | pyrroloquinoline quinone biosynthesis protein A (coenzyme PQQ synthesis protein A) TERM 4004 5995248 - 5995276 + G 75 -4.4 -4.67353 | overlap 5995264 ATCGACGCCATCACC GGCCTGCTCTCG ATGCG CGAAAGCTCGCC TTTTTCGATCCATGC pqqB 5994960 - 5995889 + | pyrroloquinoline quinone biosynthesis protein PqqB pqqC 5995886 - 5996665 + | pyrroloquinoline quinone biosynthesis protein PqqC TERM 4005 5996806 - 5996833 + F 71 -14 -2.62396 | GACCCCCACCCCCGC CCCCCCCCCCCC GCAA GGGGGAGGGGAG TCGTATCGCGAACTG pqqD 5996896 - 5997204 + | coenzyme PQQ synthesis protein D (pyrroloquinoline quinone biosynthesis protein D)(PqqD) pqqE 5997201 - 5998394 + | pyrroloquinoline quinone biosynthesis protein PqqE pip 5998387 - 5999376 + | proline iminopeptidase (PIP) (prolyl aminopeptidase) TERM 4006 5999416 - 5999473 + F 100 -30.9 -2.7263 | gap 1, opp_overlap 5999432, overlap 5999416 TGAGGAGGCGCGTCA GC-GCCGTCTCGAAGCATGAGGCCCG CGCCATC CGGGCCTCATCCTTCGAGACGGCCGC CTTTAGCGGCCTCCT TERM 4007 5999416 - 5999474 + F 100 -24.9 -3.54741 | gap 2, opp_overlap 5999432, overlap 5999416 TGAGGAGGCGCGTCA -GC-GCCGTCTCGAAGCATGAGGCCCG CGCCATC CGGGCCTCATCCTTCGAGACGGCCGCC TTTAGCGGCCTCCTC TERM 4008 5999858 - 5999841 - g 78 -14.1 -3.58522 | ATCACGATCTCGAAA GGCGCCG GCCG CGGCGCC GTGCTCGGCATCATC BRADO5799 5999526 - 6000194 + | hypothetical protein TERM 4009 6000401 - 6000370 - f 71 -13 -3.05844 | overlap 6000372 TTTCGCATCGCAACA CATGGCCGCATCGC GCCT GCAATGCGGCAACG CACCACTGTGCATGA TERM 4010 6001820 - 6001765 - gf 70 -12.1 -3.14132 | gap 3, opp_overlap 6001773, overlap 6001772 6001773 CTTCGTCTCGACCAA CCCAAAAG-TGTTCTTCGGCGGCG-ACG CCG CGTTCGGC-CCGAAGAACATCATCTGGG CGGTTGCGCAGGGCC TERM 4011 6001812 - 6001772 - gf 79 -8.4 -4.30014 | opp_overlap 6001773, overlap 6001765 6001773 TCGACCAACCCAAAA GTGTTCTTCGGCGGCG-ACG CCG CGTTCGGC-CCGAAGAACAT CATCTGGGCGGTTGC TERM 4012 6001811 - 6001773 - gf 70 -11.9 -3.17526 | opp_overlap 6001773, overlap 6001772 6001765 CGACCAACCCAAAAG TGTTCTTCGGCGGCG-ACG CCG CGTTCGGC-CCGAAGAACA TCATCTGGGCGGTTG BRADO5800 6000623 - 6002422 + | putative glutamate synthase (NADPH); putative 2-ketoglutarate: NADP oxidoreductase, gamma subunit (korC-like) TERM 4013 6002773 - 6002744 - gf 75 -14.3 -2.78715 | overlap 6002732 AATTCCGCGACGACA TCACGGTCATCGG CGTG CCGCTGACCGCGA TCACCAACTCGACCT BRADO5801 6002392 - 6004242 + | putative 2-oxoglutarate synthase subunit A (korA-like) TERM 4014 6004264 - 6004295 + F 79 -10.9 -3.84585 | gap 1, overlap 6004262 CCCCACTCTCTCCTT CGT-CATGCCCGGG CTTGA CCCGGGCATCCACG TCTTTTCTCCTCGGT BRADO5802 6004373 - 6005428 + | 2-oxoglutarate ferredoxin oxidoreductase subunit beta BRADO5803 6006853 - 6005588 - | hypothetical protein TERM 4015 6006297 - 6006316 + g 74 -5.6 -4.48713 | overlap 6006291 6006296 6006292 ATCTTGTTGCGCCCC CGCCAGGC GGCG GTCTTGCG TTTCTTCTTGGTAGG TERM 4016 6007349 - 6007300 - R 86 -14.1 -3.92659 | gap 1, opp_overlap 6007312, overlap 6007277 TGTCCAAAACTCAAA CCTGTCTACCCCCTGGCGGCCGCG CTA CGCGGCCGCC-GGTTGTATCCGGG GATTGAGCACGTACT TERM 4017 6007312 - 6007338 + r 100 -23 -3.48772 | opp_overlap 6007300 AAACCTGTCTACCCC CTGGCGGCCGCG CTA CGCGGCCGCCGG TTGTATCCGGGGATT ycgB 6008862 - 6007324 - | hypothetical protein TERM 4018 6008083 - 6008128 + g 95 -16.1 -4.08216 | gap 1, opp_overlap 6008065 6008063, overlap 6008085 CGCGATGTGGCGGAC GA-TGCGCAGCAGCTCGCGCTG CCA CGGCGCCAGCCGCGGCGCACTC TTTTCCAGGAAGTAG TERM 4019 6008085 - 6008125 + g 87 -18.9 -2.78032 | opp_overlap 6008065 6008063, overlap 6008083 CGATGTGGCGGACGA TGCGCAGCAGCTCGCGCTG CCA CGGCGCCAGCCGCGGCGCA CTCTTTTCCAGGAAG yeaH 6010136 - 6008859 - | hypothetical protein yeaG 6012301 - 6010358 - | hypothetical protein TERM 4020 6011052 - 6011075 + g 72 -13.2 -3.1372 | gap 1, overlap 6011050 ATGCCGTCCATGCCC TCGTCGACGCC GGC GGCGTCG-CGA TATTCCTGCACGCTG TERM 4021 6012134 - 6012106 - G 100 -10.3 -5.40072 | opp_overlap 6012102, overlap 6012108 TCCGGTTCAAAAAAA TACGGCCAAGG CGTGGGT CCTTGGCCGTG TCGATCATCTGAGGC TERM 4022 6012132 - 6012108 - G 100 -12.9 -4.34482 | opp_overlap 6012102, overlap 6012106 CGGTTCAAAAAAATA CGGCCAAGG CGTGGGT CCTTGGCCG TGTCGATCATCTGAG TERM 4023 6013839 - 6013827 - g 73 -4.1 -4.62069 | GGTCGACCGCAAAAA CCTGA TGA TCAAG GTGCCGGCGACCGAT TERM 4024 6015524 - 6015500 - g 100 -15.7 -4.3586 | TCATCGACATCAAAA TGGACGGCGAC GAC GTCGCCGGCCA CGACGAGAAGGTGGC BRADO5809 6013420 - 6016266 + | bifunctional transaldolase/phosoglucose isomerase BRADO5810 6016280 - 6017329 + | 6-phosphogluconate dehydrogenase-like protein TERM 4025 6018108 - 6018137 + G 74 -12.8 -3.53444 | TCTGTTCCAGCTGCT CTCGCTGGTGGC GATGGA GCCACCGGCGCG TTTCGACGCGCATAC zwf 6017326 - 6018849 + | glucose-6-phosphate 1-dehydrogenase TERM 4026 6019059 - 6019077 + G 73 -3.8 -4.63218 | overlap 6019060 GGCCGCGCGTGCACT GGTTCATC GGC GATGAGCG TTTTGTTCCGCCCGG BRADO5812 6018860 - 6020107 + | putative bifunctional: 6-phosphogluconolactonase (N-terminal) (Pgl); D-gluconate kinase (C-terminal) BRADO5813 6020126 - 6020938 + | putative Cof hydrolase BRADO5814 6022759 - 6020948 - | glycoside hydrolase family protein 15 BRADO5815 6024756 - 6022804 - | putative 4-alpha-glucanotransferase (malQ-like) TERM 4027 6028305 - 6028293 - g 84 -9.1 -4.56597 | TTCCTGCTGGAAAAA GCGCT CGG AGCGC TCGAATATGATCTGG BRADO5816 6025101 - 6028406 + | putative trehalose synthase (maltose alpha-D-glucosyltransferase)(treS-like) glgB 6028403 - 6030541 + | glycogen branching enzyme glgX 6030546 - 6032621 + | glycosyl hydrolase (glycogen debranching enzyme) TERM 4028 6033755 - 6033724 - g 73 -14.4 -3.14132 | opp_overlap 6033723 6033719 CTGGGGCGGCATCAA CAGGGGCGAGCCGA GCGG TCATCTCGCCCCCG GTGCCTTCGTGAATT BRADO5819 6032618 - 6034384 + | putative maltooligosyltrehalose trehalohydrolase TERM 4029 6035424 - 6035442 + G 73 -12.4 -3.38272 | CATTCGCGACGCGCG CGGACCGG CCG TCGGTCCG TTCTACGTGGTCATC BRADO5820 6034387 - 6037191 + | putative glycosyl hydrolase (glycosidase) BRADO5821 6037503 - 6037192 - | hypothetical protein BRADO5822 6037675 - 6037839 + | hypothetical protein TERM 4030 6037848 - 6037904 + T 72 -11.7 -3.29829 | gap 1 GATCTGATCTACCTG CGATGACGTCGTT-GGGCAGATGTGG CGCAAA CCACGTCTGCCCGAACGATCTCAGAG TTCTCACAACGTGTC ligD 6040622 - 6037908 - | ATP-dependent DNA ligase TERM 4031 6040560 - 6040570 + g 89 -8.2 -5.03314 | overlap 6040521 CCTGGCGTCACCGGA CGGC TCT GCCG TTTTTTCGAAATCGC TERM 4032 6041857 - 6041835 - g 74 -12.6 -3.61398 | GCGTCCGGCGAAGAA GGCGCACCGC TCG GCGGCGCGGC AGAGGAAAGCGGGGT BRADO5824 6040996 - 6041874 + | putative Ku protein TERM 4033 6041987 - 6041967 - T 74 -5.3 -4.57341 | overlap 6041968 AATCCTGGCTAAAAA TCGCTTGGG TCG CACAAGCGC TCCCCGACCCCACCG TERM 4034 6042187 - 6042203 + T 86 -8 -4.74215 | ATGTCAGCTCTTCTT CGACGA CTTCT TCGTCG TTTTCTTGGTGCTCT BRADO5825 6042477 - 6042175 - | hypothetical protein kdpE 6043251 - 6042562 - | two-component regulatory system response regulator kdpD 6045965 - 6043248 - | sensory histidine kinase in two-component regulatory system wtih KdpE, regulation of potassium translocation TERM 4035 6043694 - 6043729 + g 76 -14.8 -3.10464 | gap 1, overlap 6043686 6043726 TGGCGCGGCGCAGCG CGCTGCCG-ACGATCTC GCC GAGATCGTGCGGCGCCG TATTCGGCTTGATCG TERM 4036 6044576 - 6044566 - G 70 -4 -4.48713 | GGCAGGAAGAAGAAA TTGT AGC ACAA GGATGCCATCAGGCT TERM 4037 6044969 - 6044952 - G 70 -11.3 -3.53012 | GTTGGCTTGGGCAAA GCCGATG AGAT CATCGGC GATGCGGCGGCCCGC kdpC 6046638 - 6046030 - | P-type ATPase, high-affinity potassium transport system, C chain TERM 4038 6046112 - 6046123 + g 70 -3.6 -4.56597 | AGCAGCCCGATCAGC CGCC CCTC GGTG TTTTTCACGACCAGC kdpB 6048874 - 6046754 - | potassium-transporting ATPase subunit B kdpA 6050594 - 6048891 - | potassium-transporting ATPase subunit A BRADO5831 6050718 - 6050629 - | putative potassium-transporting ATPase, KdpF subunit BRADO5832 6050815 - 6050729 - | hypothetical protein TERM 4039 6050795 - 6050777 - G 83 -13.8 -3.77832 | CGCCAAAGCGAAGAA GCCGGCGC CGA GCGCCAGC ATCAAAAGGTCCATC BRADO5833 6051155 - 6051595 + | hypothetical protein BRADO5834 6051650 - 6051898 + | hypothetical protein BRADO5835 6051924 - 6052313 + | hypothetical protein TERM 4040 6052415 - 6052391 - T 100 -20 -5.42259 | GCATGGGCAAAAAAA CGGGGCGGCC GATCA GGCCGCCCCG CATGCAAGCTTCGCG BRADO5836 6054095 - 6052440 - | major facilitator superfamily oxalate/formate antiporter permease BRADO5837 6055052 - 6054834 - | putative SirA-like protein mobB 6055731 - 6055198 - | molybdopterin-guanine dinucleotide biosynthesis protein B, mobB mobA 6055956 - 6056594 + | molybdopterin-guanine dinucleotide biosynthesis protein A TERM 4041 6056697 - 6056721 + G 75 -7.2 -4.37886 | gap 1, overlap 6056681 6056700 TGTCGATCGGCTCGG TCG-CGCTGTT CGCC GACAGCGTCGA TTTTCTCGAAGATGC TERM 4042 6056794 - 6056843 + G 86 -16.5 -3.53012 | gap 2 GGCGCAACGGGCGCG GCTCGGCAAGGTGCTGGCGCTGA TCCTGC TC-GCGCCGGC-CCTCGCCGGGC TTTGGACCGCGGGCG BRADO5840 6056591 - 6057184 + | putative cation efflux transporter BRADO5841 6057357 - 6058604 + | putative branched-chain amino acid ABC transporter, substrate-binding protein TERM 4043 6058649 - 6058617 - f 88 -17 -3.05596 | TAGTGCCTCACCGAA GTCAGGCGGCCTAG TCGAG CCGGGCCGCCTGAC GTGGCCTGCGCGACA BRADO5842 6058673 - 6059653 + | hypothetical protein BRADO5843 6060554 - 6060057 - | helicase BRADO5844 6062515 - 6060551 - | hypothetical protein TERM 4044 6061694 - 6061681 - G 74 -2.3 -4.82901 | TCTCGTCGAGAAAAA GGCTG TTCC CAGTC GAGCGCGGATCATGT TERM 4045 6063114 - 6063090 - g 95 -8.6 -5.20735 | gap 1 GCAACAAAAAACAAA CCGACG-CGTC GCAC GACGACATCGG ATCCTCCCGCGCGCT BRADO5845 6062553 - 6063431 + | hypothetical protein BRADO5846 6063415 - 6064080 + | hypothetical protein TERM 4046 6064175 - 6064145 - T 71 -8.4 -3.96148 | GTTTCGCACCAGAAA CGATCGCATC AAAACACAACG GATGCGATCG AAATCAAACGAAAAC BRADO5847 6065248 - 6064331 - | putative hydroxyacid dehydrogenase/reductase; putative 3-hydroxyisobutyrate dehydrogenase TERM 4047 6064495 - 6064475 - G 74 -8.1 -4.18401 | GCAGAGATTCGAAAA GGGGGCGGC GAC GCCGGCCGC GCGGGCGACATCGAG pcaC 6065649 - 6065245 - | 4-carboxymuconolactone decarboxylase BRADO5849 6067351 - 6065891 - | NAD-dependent aldehyde dehydrogenase TERM 4048 6067183 - 6067126 - G 85 -17.8 -2.62616 | gap 3 CGAGCCTGGACAGCA GC-CGCC-CACGCTCCACGG-CCGTGAGG CGG CCCCACGGGCCTTCGAGCGCGCGGCGCGC GGCCGCGACCGCCAG BRADO5850 6068142 - 6067429 - | putative branched-chain amino acid ABC transporter, ATP binding protein BRADO5851 6069327 - 6068155 - | putative branched-chain amino acid ABC transporter, substrate-binding protein BRADO5852 6070355 - 6069324 - | putative branched-chain amino acid ABC transporter, permease protein BRADO5853 6071280 - 6070357 - | putative branched-chain amino acid ABC transporter (permease protein) braF 6072005 - 6071277 - | branched chain amino acid ABC transporter ATP-binding protein BRADO5855 6074934 - 6072349 - | putative two-component sensor histidine kinase TERM 4049 6073963 - 6073981 + g 88 -14.6 -3.9461 | overlap 6073954 GAGCCCGGCGGCAAC CGCGCTGT AGT ACAGCGCG TTGTTCTTCCACCCC BRADO5856 6075443 - 6075144 - | hypothetical protein BRADO5857 6076076 - 6075585 - | hypothetical protein BRADO5858 6076806 - 6076462 - | hypothetical protein BRADO5859 6077239 - 6078039 + | putative cbbQ/nirQ/norQ/gpvN family protein TERM 4050 6078549 - 6078584 + G 100 -8.1 -5.47218 | gap 1, overlap 6078548 GTCGCCTCCGGCCTG CGCGCTGCCGCCGGCG ACCGC CGCAAGCGGCT-CGCG TTTTTTTCGCTGCAG TERM 4051 6078849 - 6078810 - g 74 -15 -3.05596 | gap 2, opp_overlap 6078807 6078812 TATCGCGGCACGCAA GGCGCGGCGGCGCGCGCG TTGTTT CGCGCG-GCCGCGGC-CC ATGCGCAGGCGCATC BRADO5860 6078060 - 6080342 + | hypothetical protein BRADO5861 6081187 - 6080345 - | putative urease accessory protein ureD ureG 6081800 - 6081153 - | urease accessory protein UreG ureC 6083514 - 6081805 - | urease subunit alpha ureAB 6084231 - 6083536 - | bifunctional urease subunit gamma/beta BRADO5865 6084915 - 6084244 - | putative urease accessory protein UreF ureE 6085448 - 6084918 - | urease accessory protein UreE BRADO5867 6086523 - 6085504 - | hypothetical protein BRADO5868 6087983 - 6086598 - | hypothetical protein TERM 4052 6088102 - 6088125 + r 86 -18.2 -2.52464 | opp_overlap 6088104 TCCGGCGGATCAGGA GAGCGGCGGA CAGC TCCGCCGCTC TCGCTTGGCCCCGCC TERM 4053 6088123 - 6088104 - R 75 -15 -2.82516 | opp_overlap 6088102 CGGCGGATCAGGAGA GCGGCGGA CAGC TCCGCCGC TCTCGCTTGGCCCCG amiE 6089177 - 6088140 - | acylamide amidohydrolase BRADO5870 6089965 - 6089270 - | putative branched-chain amino acid ABC transporter, ATP-binding protein BRADO5871 6090708 - 6089965 - | branched chain amino acid ABC transporter ATP-binding protein BRADO5872 6091854 - 6090712 - | branched chain amino acid ABC transporter permease BRADO5873 6092750 - 6091857 - | branched chain amino acid ABC transporter permease TERM 4054 6092764 - 6092802 + r 81 -11.6 -3.91911 | opp_overlap 6092755 6092757, overlap 6092766 ATGACAGATGCCTCC CGCCATCCACCGCGCG AGGGAGG CGCGCGGTGGACAGGG TTTCCTTGACGTCAG TERM 4055 6092766 - 6092801 + r 70 -12.6 -2.94825 | gap 1, opp_overlap 6092755 6092757, overlap 6092764 GACAGATGCCTCCCG CC-ATCCACCGCGCG AGGGAGG CGCGCGGTGGACAGG GTTTCCTTGACGTCA BRADO5874 6094070 - 6092814 - | putative aliphatic amidase expression-regulating protein (amiC) TERM 4056 6093461 - 6093483 + g 74 -10.5 -3.8211 | opp_overlap 6093459 6093443 CGAGCTCGAGATATT CGTCGGCGA TCCAC TCGCCGCCG TTCTTCTCGATCAGG TERM 4057 6094243 - 6094213 - R 100 -16.9 -5.93252 | CCCAAAAACAAAAAA GCCCGACGAACCC TTCAC GGGTTCTTCGGGC TACCTAGCCGGTGCC BRADO5875 6094930 - 6094322 - | response regulator BRADO5876 6096132 - 6094966 - | putative aliphatic amidase expression-regulating protein (amiC) BRADO5877 6097291 - 6096302 - | bifunctional transcriptional regulator/glutamine amidotransferase-like domain-containing protein TERM 4058 6098583 - 6098562 - g 79 -4.4 -4.7497 | gap 1 CTGATCGACGAAAAA GGTCAGGGC GCGCA GCCC-AACC TGCACTGAGGCCAGC soxB 6097341 - 6098591 + | sarcosine oxidase, beta subunit soxD 6098600 - 6098863 + | sarcosine oxidase, delta subunit TERM 4059 6100273 - 6100295 + G 77 -16.2 -2.71712 | opp_overlap 6100257, overlap 6100273 GGCACGGCGCGCGGT GCCGCGGCCG CAG CGGCCGCGGG CTTTGGCACGACCGC TERM 4060 6100273 - 6100296 + G 83 -16 -3.53012 | gap 1, opp_overlap 6100257, overlap 6100273 GGCACGGCGCGCGGT GCC-GCGGCCG CAG CGGCCGCGGGC TTTGGCACGACCGCC soxA 6098860 - 6101835 + | sarcosine oxidase, alpha subunit soxG 6101879 - 6102424 + | sarcosine oxidase, gamma subunit glnA 6103887 - 6102589 - | glutamine synthetase I TERM 4061 6102704 - 6102686 - G 70 -8.8 -3.94002 | TAGCAGGGAATGAAA TCGCCGAG CTT CTCGCCGA GCACAGTCGACGCTT BRADO5883 6105293 - 6103968 - | putative large subunit of glutamate synthase BRADO5884 6105987 - 6105304 - | glutamate synthase alpha subunit domain-containing protein BRADO5885 6106880 - 6105987 - | putative glutamine amidotransferase GATase, classII BRADO5886 6107123 - 6107800 + | transcriptional regulator BRADO5887 6108420 - 6107935 - | hypothetical protein BRADO5888 6110156 - 6108690 - | hypothetical protein TERM 4062 6108970 - 6108986 + g 74 -5.1 -4.56597 | ACCGTCCCGACATTT GCAAACG CCG CCTTTGC TTTTTCGAGGCCGGC TERM 4063 6110859 - 6110891 + r 76 -13.3 -3.45768 | overlap 6110860 GAGCGCGACCACTCC GCGTGGAGCCGGCGA GGC TCGCCAGCCCCACGA TTGGTTGCTATTGGA TERM 4064 6110860 - 6110890 + r 80 -16.8 -2.66979 | overlap 6110859 AGCGCGACCACTCCG CGTGGAGCCGGCGA GGC TCGCCAGCCCCACG ATTGGTTGCTATTGG BRADO5891 6111189 - 6110899 - | hypothetical protein BRADO5892 6112478 - 6112128 - | putative signal peptide BRADO5893 6113183 - 6112545 - | putative N-methyltransferase; putative phosphatidylethanolamine or menaquinone biosynthesis methyltransferase (ubiE) trmU 6114404 - 6113211 - | tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase TERM 4065 6114423 - 6114473 + H 70 -9.8 -3.58269 | overlap 6114424 6114468 CAGGTCACTGCGATC G-CGGCATCAGGCTGCGG-GTCCCCG GCA CGGGAACACCGC-GCATG-TGCCGTC TTTGCGGATGGCTTG TERM 4066 6114424 - 6114471 + H 77 -13.5 -3.36694 | gap 3, overlap 6114423 6114468 AGGTCACTGCGATCG CGGCATCAGGCTGCGG-GTCCCCG GCA CGGGAACACCGC-GCATG-TGCCG TCTTTGCGGATGGCT BRADO5895 6114763 - 6116358 + | putative flagellar hook length determination protein BRADO5897 6116371 - 6117066 + | putative flagellar basal-body rod modification protein FlgD BRADO5898 6117338 - 6117613 + | hypothetical protein TERM 4067 6117647 - 6117669 + F 100 -14.2 -4.62783 | opp_overlap 6117614 6117647, overlap 6117631 CGGATTTCCGTGAAA TCGGCTTGGC TCC GCTAAGCCGA TTTTTGGCATGCCTA TERM 4068 6117669 - 6117647 - f 75 -12 -3.53811 | opp_overlap 6117631 6117647, overlap 6117614 CGGATTTCCGTGAAA TCGGCTTGGC TCC GCTAAGCCGA TTTTTGGCATGCCTA fliF 6117943 - 6119541 + | flagellar MS-ring protein fliG 6119586 - 6120674 + | flagellar motor switch protein G TERM 4069 6120821 - 6120769 - g 74 -12.7 -3.51365 | overlap 6120770 CGAGATCGCACATAA GGT-CGCGGCCGCCGAAGCCGCCGC CTACC GCAACGGCTACGA-GGCCGCGCAAC GCGAGGCCAAGGTCG TERM 4070 6120818 - 6120770 - g 75 -15.3 -2.70498 | gap 2, overlap 6120769 GAGATCGCACATAAG GTCGCGGCCGCCGAAGCCGCCGC CTACC GCAACGGCTACGA-GGCCGCG-C AACGCGAGGCCAAGG fliH 6120674 - 6121291 + | flagellar assembly protein H fliN 6121322 - 6121669 + | flagellar motor switch protein flbD 6121723 - 6123096 + | two component, sigma-54 specific, Fis family transcriptional regulator BRADO5904 6125121 - 6123310 - | hypothetical protein TERM 4071 6125113 - 6125137 + g 83 -13.6 -3.77722 | TGCGCTGGCGGAGCT CGTCGGCACG GCGAG CGTGCCGATG TTGTTGATCGTTGCA TERM 4072 6125158 - 6125176 + H 78 -10.2 -4.07568 | GATCGTTGCACCGGT CTGCGTCG TTG CGCCGCAG TTTTGCGCGGAAGCG BRADO5906 6125701 - 6127935 + | hypothetical protein BRADO5908 6128560 - 6128405 - | putative signal peptide TERM 4073 6128568 - 6128588 + r 78 -10.3 -4.09864 | opp_overlap 6128564, overlap 6128566 CGTTTCATGAATTCC GCCGCTGAC GCC GACGGCGGC TTTTACGGCGTCCGT BRADO5909 6129202 - 6128627 - | NAD(P)H-flavin oxidoreductase BRADO5910 6130077 - 6129217 - | aliphatic sulfonate ABC transporter ATP-binding protein BRADO5911 6130894 - 6130088 - | aliphatic sulfonate ABC transporter permease ssuD 6132075 - 6130891 - | alkanesulfonate monooxygenase BRADO5913 6133069 - 6132101 - | aliphatic sulfonate ABC transporter substrate-binding protein BRADO5914 6133447 - 6133632 + | putative periplasmic nitrate reductase NapE BRADO5915 6133650 - 6133970 + | putative periplasmic nitrate reductase NapD TERM 4074 6136476 - 6136464 - g 83 -9.1 -4.35885 | ACCGACTACAAGAAA TGCGC CGT GCGCA TCGAGCGGGTGTGAC napA 6133986 - 6136490 + | nitrate reductase napB 6136514 - 6136966 + | periplasmic nitrate reductase, small subunit diheme cytochrome c (napB) napC 6136963 - 6137625 + | periplasmic nitrate reductase, four-heme c-type cytochrome (NapC/NirT) TERM 4075 6137988 - 6137968 - g 76 -2.3 -4.86731 | opp_overlap 6137973, overlap 6137970 CTGGCTGAAAGAAAA GCCCGGCCG GAA CGGCACGCC GCAGGTGTTCCGGCT TERM 4076 6138331 - 6138355 + G 74 -12.1 -3.61398 | CGGCGATCCCGCGCA GCTGCCGCC GGTCAAG GGCGGCGGC TTCTTCACCGACAGC TERM 4077 6138640 - 6138583 - g 74 -9.8 -3.78934 | opp_overlap 6138585, overlap 6138580 6138637 CCGCGCCTACAACAA CCGCTT-CCGCCAGCGCCTCGACATCGA GGAG CCGCTGCCG-GTCGCCGGCGACAAGCTG GTCTGCCTGCGCAAC BRADO5919 6137903 - 6139012 + | putative deoxyribonuclease BRADO5920 6139115 - 6140272 + | hypothetical protein TERM 4078 6140422 - 6140366 - f 72 -13.6 -2.79796 | opp_overlap 6140384, overlap 6140328 CTCGACGCGAGCACA CCGCCCGGCGGTGGGCA-CGCAGCCGCC TGC GGCGGCCGCTTTGCCCACC-CTACGAGG CTGTGAATCTTTCGA TERM 4079 6140384 - 6140404 + F 81 -13.9 -3.53811 | opp_overlap 6140366 CCCGGCGGTGGGCAC GCAGCCGCC TGC GGCGGCCGC TTTGCCCACCCTACG TERM 4080 6141287 - 6141243 - g 74 -2.6 -4.73388 | overlap 6141260 6141261 AAGCTCGAGGAAAAA GGCGGCAACGGCAAGAAGCC GAAGG AGCCTCGGGCCTCCACCACC GATCCGCAGGCGCGG BRADO5921 6140490 - 6141836 + | putative transposase TERM 4081 6141840 - 6141825 - f 72 -3.9 -4.56775 | overlap 6141826 6141836 ATCGCCTGTCAAAAA GCAGC ATCATA GCCGC CGATAGCGGCATCCG TERM 4082 6142413 - 6142448 + F 71 -12.5 -3.09516 | GCTGCAATTCCCTTT TGCCCGTCGGGTTAC TTTGTC GCATCCCGACGGGCG TTGCATCGTCGGGCA BRADO5922 6142429 - 6142653 + | hypothetical protein BRADO5923 6144824 - 6143133 - | hypothetical protein msrA 6145066 - 6145782 + | methionine sulfoxide reductase A msrB 6145853 - 6146263 + | methionine sulfoxide reductase B BRADO5928 6146677 - 6146952 + | hypothetical protein TERM 4083 6146979 - 6147001 + T 100 -16.3 -5.61596 | opp_overlap 6146977 TCATCCGACGACACC CTGCCCCGC CCAGC GCGGGGCAG TTTTTTTCTGGGGGT BRADO5929 6147592 - 6147041 - | hypothetical protein BRADO5930 6148612 - 6147653 - | AraC/XylS family transcription factor BRADO5931 6148878 - 6149117 + | hypothetical protein BRADO5932 6149148 - 6149411 + | putative signal peptide BRADO5933 6149872 - 6149435 - | putative membrane protein and putative signal peptide BRADO5934 6151567 - 6149927 - | hypothetical protein purA 6152896 - 6151604 - | adenylosuccinate synthetase TERM 4084 6152146 - 6152169 + g 72 -13.8 -3.02144 | GGCCCAGGCCGGCAC CGGTCGCGGC TTGC GCCGCAACCG TGTTGGACGAGGTCA lolD 6153945 - 6153271 - | lipoprotein-releasing system (ABC transporter), ATP-binding protein lolD BRADO5937 6155173 - 6153947 - | lipoprotein ABC transporter permease protein BRADO5938 6156465 - 6155170 - | putative efflux transporter TERM 4085 6157308 - 6157282 - g 70 -13 -3.01712 | overlap 6157294 CGCTGGTCGTCAATA CCGGGCCGAACA CGA TGTTCGGCGCAG CCGCCTCGGCGCTGG BRADO5939 6156639 - 6159194 + | putative magnesium-translocating P-type ATPase BRADO5940 6159338 - 6160267 + | DMT family permease BRADO5941 6160374 - 6161318 + | DMT family permease TERM 4086 6162633 - 6162594 - g 73 -13.6 -3.31461 | gap 1, opp_overlap 6162591, overlap 6162597 6162618 CAGGGATCCGGACAA GAAGGCGCGCAAGCCGCTC AAT GA-CGGCGTGCTCACCTTC CCGTTCTTCACGATC TERM 4087 6162630 - 6162597 - g 71 -9.5 -3.79906 | gap 1, opp_overlap 6162591, overlap 6162594 6162618 GGATCCGGACAAGAA GGCGCGCAAGCCGCTC AAT GA-CGGCGTGCTCACC TTCCCGTTCTTCACG TERM 4088 6162670 - 6162654 - g 73 -12.3 -3.37796 | overlap 6162618 CTTCACGATCGAGAA CGTCGAC CGC GTCGACG ATACCCACATCATCG BRADO5942 6161437 - 6162792 + | putative signal peptide TERM 4089 6162839 - 6162868 + T 100 -16.4 -4.25104 | opp_overlap 6162821 6162840, overlap 6162840 CCGCCCTCCGGACCA ACGGCGCTGGCG CTGCGA CGCCAGCGCCGG TTTTGATCAGGCCGC TERM 4090 6162867 - 6162840 - T 95 -20.6 -3.14132 | opp_overlap 6162839 6162840, overlap 6162821 CGCCCTCCGGACCAA CGGCGCTGGCGC TGCG ACGCCAGCGCCG GTTTTGATCAGGCCG TERM 4091 6162840 - 6162867 + T 95 -19.9 -3.14848 | opp_overlap 6162821 6162840, overlap 6162839 CGCCCTCCGGACCAA CGGCGCTGGCG CTGCGA CGCCAGCGCCG GTTTTGATCAGGCCG BRADO5943 6164560 - 6162875 - | putative methyl-accepting chemotaxis sensory transducer TERM 4092 6163713 - 6163742 + g 83 -15.7 -3.62046 | overlap 6163735 6163736 GCGAGGTTCTGCATG GCGGCGCGCCG CTCCGCCT CGGCGCGCTGC TTGTTCGCGGCCTCC ftsH 6166533 - 6164677 - | cell division protein ftsH homolog (ATP-dependent zinc-metallo protease) TERM 4093 6166624 - 6166607 - R 73 -12.7 -3.1505 | opp_overlap 6166607 ACGAGCGTTTAGCAA GCGCCCT CCGC AGGGCGC TTGTCCTGGATCAAG TERM 4094 6166607 - 6166624 + r 76 -12.7 -3.4252 | opp_overlap 6166607 ACGAGCGTTTAGCAA GCGCCCT CCGC AGGGCGC TTGTCCTGGATCAAG BRADO5945 6168283 - 6166694 - | putative extracellular ligand-binding receptor BRADO5947 6170535 - 6168871 - | putative signal peptide TERM 4095 6170679 - 6170705 + r 100 -18 -5.14965 | opp_overlap 6170679 CGCAAAATCAAAAAA GGCAGCGCGGCG CGG TGCCGTGCTGCC TTTTTTGGTCGACCT TERM 4096 6170705 - 6170679 - R 100 -15.1 -5.46698 | opp_overlap 6170679 CGCAAAATCAAAAAA GGCAGCGCGGC GCGGT GCCGTGCTGCC TTTTTTGGTCGACCT serA 6172324 - 6170735 - | D-3-phosphoglycerate dehydrogenase TERM 4097 6171572 - 6171514 - G 72 -13.2 -3.10796 | gap 3, opp_overlap 6171517, overlap 6171512 CGGGATGACCGAACA GCGGATTGCTGGTCGCCGGCTCCTCGGCG AACA CGTCGAGG-GC-GGC-ACCCGCAACCTGC TTGGAGTTTAGCGCC serC 6173666 - 6172494 - | phosphoserine aminotransferase TERM 4098 6173463 - 6173421 - G 70 -11.9 -3.42996 | gap 1, opp_overlap 6173430 6173432 GAGCAGCGACCACAA CGCCATCTCGACGGCG-CCG GTGT CGGACGCCGGCACGATGCCG ATCTTGTAGTCGGCC BRADO5950 6174100 - 6173810 - | putative signal peptide BRADO5951 6174212 - 6175195 + | putative aldo/keto reductase BRADO5952 6175192 - 6176043 + | putative amidohydrolase (metal-dependent) BRADO5953 6176505 - 6176050 - | putative histone acetyltransfersase (HAT) BRADO5954 6177335 - 6176535 - | putative outer membrane protein (OMPA-like), hemin-binding protein TERM 4099 6177320 - 6177301 - G 81 -11.4 -3.91144 | GGCAGATCGGACAAA TCGGCGGC CTGG GCCACCGA GACCATGCCGCACAC TERM 4100 6177524 - 6177492 - R 91 -18.6 -2.83403 | gap 1, opp_overlap 6177492 6177499, overlap 6177499 TCTCGCGGACCAAAC GCAAAAACGGCGCGG ACGT CCGCGCCGTTTT-GC CTTGTTGATGCGATC TERM 4101 6177492 - 6177524 + r 91 -18.6 -2.83371 | gap 1, opp_overlap 6177492 6177499, overlap 6177499 TCTCGCGGACCAAAC GCAAAAACGGCGCGG ACGT CCGCGCCGTTTT-GC CTTGTTGATGCGATC TERM 4102 6177499 - 6177518 + r 100 -16.4 -4.36729 | opp_overlap 6177492 6177499, overlap 6177492 GACCAAACGCAAAAA CGGCGCGG ACGT CCGCGCCG TTTTGCCTTGTTGAT TERM 4103 6177518 - 6177499 - R 100 -16.4 -4.82855 | opp_overlap 6177499 6177492, overlap 6177492 GACCAAACGCAAAAA CGGCGCGG ACGT CCGCGCCG TTTTGCCTTGTTGAT BRADO5955 6178326 - 6177556 - | putative outer surface protein (OMPA-like); putative heat-resistant agglutinin 1 TERM 4104 6178868 - 6178901 + r 100 -26.9 -2.71731 | opp_overlap 6178868, overlap 6178872 GGCACCATGCAAGAA GCAAGGCCCGCCATC AAAG GATGGCGGGCCTTGC TGATTGACCGATCCG TERM 4105 6178901 - 6178868 - R 100 -26.9 -3.69395 | opp_overlap 6178868 6178872 GGCACCATGCAAGAA GCAAGGCCCGCCATC AAAG GATGGCGGGCCTTGC TGATTGACCGATCCG TERM 4106 6178872 - 6178897 + r 95 -20.5 -3.27298 | opp_overlap 6178868, overlap 6178868 CCATGCAAGAAGCAA GGCCCGCCATC AAAG GATGGCGGGCC TTGCTGATTGACCGA glmM 6180273 - 6178924 - | phosphoglucosamine mutase TERM 4107 6179836 - 6179860 + g 71 -12.1 -3.30159 | overlap 6179839 GCGGCGGGCGCGGCC GAGGCTCGCGC TCT GCGCCAGCTTC TTGTCGAGCGATTCA TERM 4108 6179839 - 6179857 + g 74 -10.2 -3.79113 | overlap 6179836 GCGGGCGCGGCCGAG GCTCGCGC TCT GCGCCAGC TTCTTGTCGAGCGAT TERM 4109 6180495 - 6180479 - H 71 -11.5 -3.47322 | opp_overlap 6180476 CGGGACCACAATCAA GGCGCGC CTG ACGCGCC GCGTCATCTCCAGGA BRADO5958 6180694 - 6181830 + | putative L-lactate dehydrogenase (cytochrome); FMN-dependent alpha-hydroxy acid dehydrogenase TERM 4110 6181941 - 6181916 - T 89 -14.7 -3.85698 | CGTTGTCCGGACAAA TCGTGACGCGC GCCA GCGCGTCGCGA CGGCGATCCGGGATC TERM 4111 6182100 - 6182141 + T 70 -10.2 -3.60098 | gap 2, opp_overlap 6182084, overlap 6182101 6182103 CGGCCGTGCCTCACA TCGGCGGCGTCAGGCCGTCG CGGC CGACG-C-TGACGCGGCTGG TTTCGAGTGAGCCGT BRADO5960 6182616 - 6182095 - | hypothetical protein aroE 6183682 - 6182816 - | shikimate dehydrogenase BRADO5962 6184331 - 6183690 - | hypothetical protein TERM 4112 6184026 - 6183986 - G 72 -8.2 -4.11216 | gap 1, overlap 6183989 GCCCCATCGCCAAAA CGATCGCGGCCACGGCGCC GAAC GGCACAGTGGC-GAGATGG CAGAGAGTGGCCGCG BRADO5963 6186159 - 6184396 - | sulfate transporter TERM 4113 6185153 - 6185110 - G 82 -5.9 -4.8083 | opp_overlap 6185135, overlap 6185112 GAAGACGAGCAAAAA GAGCGAGTGCA-GCATGCCCG ACAC CGGGC-CGCGCGCACCGGCGC GGACATTGGTGGCGG TERM 4114 6185393 - 6185377 - G 95 -15.1 -4.18018 | CTTGGCGAGGGAAAA CGCCGGC AGC GCCGGCG CCGGCAGCTCGCGCG BRADO5964 6186590 - 6186252 - | hypothetical protein TERM 4115 6186620 - 6186604 - R 71 -8.1 -3.94344 | overlap 6186599 ATGAGACAAATACAA TGATGTA AAA TACATCA TCCAGAGCCGATGGC BRADO5965 6187618 - 6186689 - | putative two-component sensor histidine kinase with a histidine kinase (N-term) and an ATP-binding region (C-ter) TERM 4116 6187467 - 6187451 - G 75 -2.9 -4.72272 | overlap 6187454 6187455 CGCGGGCATGAAAAA GTACCAT GCC ATGGCGC CGCACAGCGCCGCCG BRADO5967 6194007 - 6187981 - | hemagglutinin-like protein BRADO5966 6187922 - 6188074 + | hypothetical protein BRADO5968 6198899 - 6193980 - | putative haemagglutinin-like (or adhesin-like) with a signal peptide TERM 4117 6196734 - 6196724 - GR 90 -8.2 -4.82901 | TGCCGTTGAGAAAAA GGCC ATA GGCC GCATTCGTATTGTTG TERM 4118 6198956 - 6198915 - R 71 -13.7 -2.63164 | gap 1, opp_overlap 6198915 6198914, overlap 6198914 CGATACTCAACCAAT CGCGCTACGATGCTCGAAGC CGC GCTTCT-GCGTCGTCGCGCG CGCGGCCGCCCGGAT BRADO5969 6200810 - 6199080 - | putative hemolysin activator-like protein with signal peptide TERM 4119 6199448 - 6199467 + g 82 -16.4 -3.31792 | opp_overlap 6199460 CCAGAGCGATCTGCT CCGGCCGC AACA GCGGCCGG TTCTGCGAGTACTGG fusA 6203243 - 6201195 - | elongation factor G TERM 4120 6203365 - 6203344 - R 74 -5.1 -4.56597 | gap 1, overlap 6203346 6203364 GGGTCCCGCGAAAAA CG-TCGCTGC AGT GCAGAGAACG GCTCGCTCTTCCCGC TERM 4121 6203402 - 6203364 - R 83 -14.7 -3.50393 | overlap 6203344 CTGCAGTGCAGAGAA CGGCTCGCTCTTCCCG-CA CGA TGACGGGAAGAGCG-GCTG GTCACAGCGAAGGGA BRADO5971 6203891 - 6203421 - | hypothetical protein BRADO5972 6204583 - 6204059 - | putative signal peptide TERM 4122 6204290 - 6204250 - G 73 -13.8 -3.09492 | overlap 6204230 CGCCGAAGCCGAACA TCGCGGCCGCACTGGCGG ACACA CCGCCATAGCGCCCGCGC AGCTCGCTGCGGCCG TERM 4123 6204657 - 6204625 - R 100 -23.7 -3.48924 | opp_overlap 6204629, overlap 6204629 TCACTCCGGACAGAA GAAAGGCGCCATGTT CAA AACATGGCGCCTTTC GGCCTGGATATGGGC TERM 4124 6204629 - 6204653 + r 100 -18.7 -3.57971 | opp_overlap 6204625 6204629 TCCGGACAGAAGAAA GGCGCCATGTT CAA AACATGGCGCC TTTCGGCCTGGATAT TERM 4125 6204653 - 6204629 - R 100 -18.7 -4.38927 | opp_overlap 6204629, overlap 6204625 TCCGGACAGAAGAAA GGCGCCATGTT CAA AACATGGCGCC TTTCGGCCTGGATAT aatA 6205908 - 6204703 - | aspartate aminotransferase TERM 4126 6204953 - 6204937 - G 70 -11.5 -3.41125 | overlap 6204938 CGGATAGACGTAGAA CGCGCCC TCG GGACGCG GGCACTCGATGCCGC BRADO5974 6206125 - 6207357 + | hypothetical protein TERM 4127 6207349 - 6207380 + F 76 -8.6 -4.20834 | opp_overlap 6207352, overlap 6207334 6207352 CGCGCGCGCATCGCA CAAGCGTGATCTCG ATCG CGTGATCTCGCTCG TTTGATTGTTTTGGA BRADO5975 6207517 - 6208215 + | putative glutathione S-transferase (GST); putative maleylacetoacetate isomerase BRADO5976 6208469 - 6208663 + | hypothetical protein BRADO5977 6208731 - 6208925 + | hypothetical protein TERM 4128 6209357 - 6209310 - g 79 -16.3 -3.05384 | gap 1, opp_overlap 6209318, overlap 6209313 CGCGCGTTGATCGAA GCAGTCTACGCGCAGGCGCGCC AGGCG GGCGCGCCT-CGCGTCTACTGG CAGACCCACGAGACC TERM 4129 6209354 - 6209313 - g 77 -16.6 -2.75064 | gap 1, opp_overlap 6209318, overlap 6209310 GCGTTGATCGAAGCA GTCTACGCGCAGGCGCGCC AGGCG GGCGCGCCT-CGCGTCTAC TGGCAGACCCACGAG TERM 4130 6209318 - 6209349 + G 93 -19.5 -2.78384 | gap 1, opp_overlap 6209313 6209310 GATCGAAGCAGTCTA CGCGCAGGCGCGCC AGGCG GGCGCGCCT-CGCG TCTACTGGCAGACCC TERM 4131 6209382 - 6209420 + G 73 -13 -3.26545 | opp_overlap 6209380 6209375 6209403 GAGACCAACACCACC GCGCAAGCGCTCTACGAC AAA GTCGCCGAGCGCTCGGGC TTCATCGTCTATCGC BRADO5978 6208986 - 6209447 + | putative histone acetyltransferase (HAT) TERM 4132 6209537 - 6209575 + T 100 -9.5 -5.47821 | overlap 6209538 AAGATCACGCGTGTC AGCGGTCCCCGTCAG TCGCCGTCT CTGACCGGGGCCGCG TTTTTTTGGGTCGGT TERM 4133 6209538 - 6209574 + T 83 -13 -3.87608 | overlap 6209537 AGATCACGCGTGTCA GCGGTCCCCGTCAG TCGCCGTCT CTGACCGGGGCCGC GTTTTTTTGGGTCGG BRADO5979 6211613 - 6209631 - | hypothetical protein TERM 4134 6211452 - 6211399 - G 72 -14.6 -2.79302 | gap 3, overlap 6211386 6211385 6211388 ACCACGCTGACGACA GCCAGC-CCGCGCGGAGCGCGCAGCCG CTG CAGCTGCGC-CACCA-GCGGCGCCAGC ACGAAGCTGAGCAGG TERM 4135 6211933 - 6211881 - R 82 -14.9 -3.26649 | gap 2, overlap 6211884 AGACGTTCACAGCAA GTACGTCCGCGCTCCCGCTCCCCGT TCTTC ACGGGGAAAGGGAGCGCAG-CGG-C TTCGAGGCGGCATCA TERM 4136 6211931 - 6211884 - R 100 -22.1 -2.81547 | gap 1, overlap 6211881 CGTTCACAGCAAGTA CGTCCGCGCTCCCGCTCCCCGT TCTTC ACGGGGAAAGGGAGCGCAG-CG GCTTCGAGGCGGCAT BRADO5980 6212283 - 6211963 - | hypothetical protein BRADO5981 6213639 - 6212416 - | putative signal peptide BRADO5982 6215150 - 6213636 - | hypothetical protein TERM 4137 6214526 - 6214503 - G 79 -11.8 -3.86897 | overlap 6214506 CTGATTGTCGAGAAA GAACAGCATC GCCG GATGCTGCTC CACCGCCTTGAGCAT TERM 4138 6214523 - 6214506 - G 78 -9.9 -4.06687 | overlap 6214503 ATTGTCGAGAAAGAA CAGCATC GCCG GATGCTG CTCCACCGCCTTGAG BRADO5983 6215286 - 6215507 + | hypothetical protein BRADO5984 6215519 - 6216187 + | putative haloacid dehalogenase/epoxide hydrolase TERM 4139 6216586 - 6216542 - g 73 -3.6 -4.66163 | overlap 6216543 6216573 AGGTCCAGGGAAAAA TTCGATC-GCAAGGCGTGGCTC GCC AAGC-ACACCTCGCAGAGCGAC AAGAACCCCAAGCTC BRADO5985 6216473 - 6216982 + | hypothetical protein TERM 4140 6217109 - 6217067 - g 75 -14.1 -3.34398 | gap 1, overlap 6217065 6217068 CGTCTTCCTGAAAGA GGCGCCGCCC-CAGGCGAAA GCGT TTCCGCCAGTGAGCGGCGCG GAGTTCGAGGATCAC TERM 4141 6217108 - 6217068 - g 85 -17.6 -2.60496 | gap 1, overlap 6217067 6217065 GTCTTCCTGAAAGAG GCGCCGCCC-CAGGCGAAA GCGT TTCCGCCAGTGAGCGGCGC GGAGTTCGAGGATCA BRADO5986 6216996 - 6217481 + | hypothetical protein BRADO5987 6218064 - 6217456 - | TetR family transcriptional regulator BRADO5988 6218163 - 6218945 + | enoyl-CoA hydratase BRADO5989 6219631 - 6218942 - | putative glutathione S-transferase (GST) TERM 4142 6219269 - 6219251 - G 75 -13.1 -3.41569 | opp_overlap 6219249 6219248, overlap 6219249 CGACGCACGGAAATA GGCGGCG TCTTC CGCCGCC AGATTGTTCGGGATA BRADO5990 6219903 - 6219670 - | hypothetical protein BRADO5991 6220675 - 6219911 - | hypothetical protein BRADO5992 6220768 - 6221691 + | LysR family transcriptional regulator TERM 4143 6221704 - 6221677 - f 93 -8.4 -5.04385 | GATACCGTCAAAAAA GACGCGAACGTG TGAA CCCGTTCACATC TGCCGAGACGTATTC BRADO5993 6221811 - 6221969 + | hypothetical protein BRADO5994 6222172 - 6222354 + | hypothetical protein BRADO5995 6222549 - 6225707 + | excinuclease ABC subunit B BRADO5997 6226850 - 6226650 - | hypothetical protein TERM 4144 6227134 - 6227167 + r 77 -3.9 -4.93877 | gap 1, overlap 6227136 6227137 GGCGATGACGGCGGT TGTTGTCATTG-CGAG CGG CGCGACAATGACAGTG TTTTGTTTGATCCGG BRADO5999 6227618 - 6227409 - | hypothetical protein prs 6229153 - 6228200 - | ribose-phosphate pyrophosphokinase TERM 4145 6229312 - 6229296 - R 93 -7.9 -5.0538 | opp_overlap 6229296 6229297, overlap 6229297 TTCCAGGTCAAAAAA CGGCGCA AAA TGCGCCT GTTTGCCTAATGGTC TERM 4146 6229297 - 6229311 + r 71 -11.4 -3.42663 | opp_overlap 6229296 6229297, overlap 6229296 TCCAGGTCAAAAAAC GGCGCA AAA TGCGCC TGTTTGCCTAATGGT TERM 4147 6229311 - 6229297 - R 73 -11.4 -3.62746 | opp_overlap 6229297 6229296, overlap 6229296 TCCAGGTCAAAAAAC GGCGCA AAA TGCGCC TGTTTGCCTAATGGT BRADO6001 6229915 - 6229319 - | putative signal peptide BRADO6002 6230857 - 6230111 - | hypothetical protein BRADO6003 6232005 - 6230878 - | hypothetical protein lgt 6232859 - 6232002 - | prolipoprotein diacylglyceryl transferase BRADO6005 6233100 - 6233390 + | hypothetical protein TERM 4148 6233417 - 6233440 + F 76 -9.6 -4.05902 | gap 1, overlap 6233422 CCGCACCGGGGCGGG TGGATGGGGCC GCC GGCCCC-TTCA TTTCCTTGTCATTTC TERM 4149 6233422 - 6233436 + F 77 -12.8 -3.63655 | overlap 6233417 CCGGGGCGGGTGGAT GGGGCC GCC GGCCCC TTCATTTCCTTGTCA TERM 4150 6233528 - 6233554 + F 72 -4.2 -4.56597 | opp_overlap 6233522 6233532, overlap 6233534 CCGAAGGGACGTCCA GCAACGGGCCGC ATT GCGGCCTTTAAC TTTTTAAAACAAGGA TERM 4151 6233534 - 6233548 + F 86 -12.8 -3.99805 | opp_overlap 6233522 6233532, overlap 6233528 GGACGTCCAGCAACG GGCCGC ATT GCGGCC TTTAACTTTTTAAAA TERM 4152 6233651 - 6233676 + F 71 -8.2 -3.85698 | CGCACGGGCAGAGCG TCGCGCCGGG AGAGTG CCCGGAGTGA TTTATGGAGACAACC TERM 4153 6234188 - 6234164 - g 73 -12.7 -3.44051 | TGGTGAGGAGCAGAA GGCCGCCGCTG GCG CTGCCGCGGCC CCGGCCGCTGCCGCC BRADO6006 6233712 - 6234287 + | 50S ribosomal protein L25/general stress protein Ctc TERM 4154 6234341 - 6234288 - f 100 -18.3 -3.63862 | gap 3, opp_overlap 6234340 GAGAAGAAGAAGTAA GCCGATCCACTGTCGGAGCGCGCGGG CAGTC CCCGTGCGCTCCG-CAGC-GA-CGGC AGGTCCCGGTCCCGC pth 6234360 - 6234965 + | peptidyl-tRNA hydrolase TERM 4155 6234984 - 6234944 - f 74 -13.3 -3.28712 | gap 2, overlap 6234945 GGGTTTTCTGGACAA GGGCGACGCCGGCGCCGCG TGAGG CGCG-CGC-GACGTCGCCG TGAGAGGATGCGAGA TERM 4156 6234983 - 6234945 - f 80 -16.8 -2.57132 | gap 2, overlap 6234944 GGTTTTCTGGACAAG GGCGACGCCGGCGCCGCG TGAGG CGCG-CGC-GACGTCGCC GTGAGAGGATGCGAG TERM 4157 6235753 - 6235772 + G 72 -5.7 -4.37092 | gap 1, opp_overlap 6235700, overlap 6235751 6235754 GAGATCGCGACCCTG TCG-CGCG AGGAG CGCGTCGA TTTTCTCGAGACGCT BRADO6008 6235006 - 6236103 + | translation-associated GTPase BRADO6009 6236405 - 6236133 - | hypothetical protein BRADO6010 6236592 - 6237098 + | hypothetical protein TERM 4158 6237350 - 6237313 - g 82 -16.9 -2.82623 | overlap 6237292 6237310 CGTCGCGGACAATCA GCGTCTCGCCGAGCTCG CCCG CGCGCGCGGCGAGACGG TCGTGCTGGGCGGAC BRADO6011 6237098 - 6237577 + | hypothetical protein BRADO6012 6237693 - 6237836 + | putative signal peptide TERM 4159 6238108 - 6238083 - T 100 -18.3 -4.34402 | TCGCCCACAGCAAAA CCGCCACGCGA TGAC TCGCGCGGCGG TTCACCTCAACAACA BRADO6013 6238548 - 6238135 - | hypothetical protein BRADO6014 6239648 - 6238701 - | hypothetical protein BRADO6015 6240242 - 6239790 - | putative NTF2-like protein TERM 4160 6239959 - 6239986 + g 70 -9.8 -3.73224 | gap 1 TCCTGCGTCGTCATC GCGCAGCGGACCA TCG TGG-CTGCAGCGC TTTCGTCCAGCATCA BRADO6016 6240693 - 6240427 - | hypothetical protein BRADO6017 6241193 - 6240816 - | hypothetical protein TERM 4161 6241478 - 6241441 - H 81 -7 -4.77438 | gap 2, overlap 6241477 AGGCATCATGAAAAA GGTTCGCGTCGCGCCTGC CGAA GC-GGCGGCACG-GAACC AGGCTGCGAGCCTGT BRADO6018 6241537 - 6241758 + | putative signal peptide TERM 4162 6241859 - 6241830 - f 74 -12.1 -3.44146 | gap 1 GTCGGCGACAAGGAA GCGGTCAGGCCCTC GAC GAGGGCCCT-CCGC ACCGGATCCTCGCAA BRADO6019 6241958 - 6242281 + | hypothetical protein BRADO6021 6242634 - 6243863 + | major facilitator superfamily benzoate transporter permease TERM 4163 6243872 - 6243890 + F 72 -11.7 -3.31144 | overlap 6243852 6243849 CGCGTAGCGGAATTT CGCAGCG CACCA CGCTGCG TTGTCGCGATCGCGC BRADO6022 6244000 - 6245319 + | ABC transporter substrate-binding protein BRADO6023 6245316 - 6246251 + | ABC transporter permease BRADO6024 6246248 - 6247072 + | putative ABC transporter (permease protein) TERM 4164 6247143 - 6247123 - f 73 -11.1 -3.59979 | TTTCCCTATGTGAAA TGCCGGAGC AAA GCTGCGGCA AAATGTCGGGACTGC BRADO6025 6247386 - 6248480 + | sensor histidine kinase coxF 6249302 - 6248487 - | carbon monoxide dehydrogenase, coxF accessory protein TERM 4165 6248770 - 6248757 - G 83 -9.5 -4.3767 | overlap 6248758 CGACACGACAACAAA CCGGC GCCC GCCGG CGAGACCGTCCAGCG coxE 6250535 - 6249330 - | carbon monoxide dehydrogenase, coxE accessory protein TERM 4166 6249432 - 6249406 - G 72 -13 -3.09491 | gap 1 TAGAGATCGACGTAA GGCAGCGCGGC CTTGAT GCCGCGC-GCC TCGGGCGCGTAGCTG TERM 4167 6250571 - 6250553 - R 70 -11.6 -3.14344 | opp_overlap 6250562 6250564 GACCTTCCCCAGCAA GCGCGCGG TTA CCTCGCGC GAGACCCGCGCGCGG coxD 6251419 - 6250532 - | carbon monoxide dehydrogenase, coxD accessory protein coxL 6254144 - 6251724 - | carbon monoxide dehydrogenase large chain coxS 6254641 - 6254141 - | carbon-monoxide dehydrogenase small subunit coxM 6255671 - 6254808 - | carbon monoxide dehydrogenase medium chain (CO dehydrogenase subunit M) (CO-DH M) TERM 4168 6255704 - 6255714 + r 71 -8.2 -3.95584 | overlap 6255691 6255712 CTGGCCTGCCTTTTG CGGC TTG GCCG TTTGCTTGCTGCGAC coxC 6257269 - 6256034 - | carbon monoxide dehydrogenase, coxC signalling protein TERM 4169 6257559 - 6257530 - R 100 -15.7 -4.12532 | TCGTGCAGAGAGAAA GCATGTGGCCGGC CATA GCCCGCCACACGC CATCCCCCCGCTCAG BRADO6033 6258176 - 6257571 - | riboflavin synthase subunit beta BRADO6034 6258840 - 6259340 + | hypothetical protein proC 6259505 - 6260332 + | pyrroline-5-carboxylate reductase TERM 4170 6260358 - 6260416 + T 95 -18.9 -3.40403 | gap 1, opp_overlap 6260370 6260374, overlap 6260370 6260387 6260388 CTCCGCCGTCATTGC G-AGCGCAGCGAAGCAATCCAGGGCCAC GCCC GCGGCCCTGGATTGCTTCGTCGCGGAGC TTGTCATCGGGCCGC TERM 4171 6260403 - 6260370 - T 100 -23.3 -3.06796 | opp_overlap 6260358 6260370 6260387 6260388, overlap 6260374 TGCGAGCGCAGCGAA GCAATCCAGGGCCAC GCCC GCGGCCCTGGATTGC TTCGTCGCGGAGCTT TERM 4172 6260370 - 6260403 + T 95 -21.1 -3.14463 | opp_overlap 6260370 6260374, overlap 6260358 6260387 6260388 TGCGAGCGCAGCGAA GCAATCCAGGGCCAC GCCC GCGGCCCTGGATTGC TTCGTCGCGGAGCTT TERM 4173 6260399 - 6260374 - T 91 -16.9 -3.37522 | opp_overlap 6260370 6260358 6260387 6260388, overlap 6260370 AGCGCAGCGAAGCAA TCCAGGGCCAC GCCC GCGGCCCTGGA TTGCTTCGTCGCGGA TERM 4174 6260424 - 6260446 + T 84 -16.2 -3.09635 | overlap 6260388 6260387 CGCGGAGCTTGTCAT CGGGCCGCGC TTT GCGCGGACCG TTGGCTCCTCGCAAT BRADO6036 6260874 - 6260479 - | putative thioesterase TERM 4175 6260937 - 6260910 - R 74 -12.6 -3.28712 | TGTCGTCCCGGACAA GCTCAGACGCGC GACA GCGCGGCGGAGC GCCGATCCGGGACCC BRADO6037 6261305 - 6261102 - | putative 4-oxalocrotonate tautomerase hisS 6263131 - 6261491 - | histidyl-tRNA synthetase TERM 4176 6263239 - 6263187 - R 76 -9.8 -3.87075 | opp_overlap 6263205 6263225, overlap 6263159 6263189 ACCATGGCTGACAAA TACCGGAACGGTGGGC-ACGGCCCGC TTC GCGGTCCTTTGCCCACC-CTACGGGA TGGGATGCGTTGCTG TERM 4177 6263238 - 6263189 - R 76 -12.7 -3.5241 | gap 1, opp_overlap 6263205 6263225, overlap 6263159 6263187 CATGGCTGACAAATA CCGGAACGGTGGGC-ACGGCCCGC TTC GCGGTCCTTTGCCCACCCTACGGG ATGGGATGCGTTGCT BRADO6039 6264497 - 6263418 - | branched-chain amino acid aminotransferase BRADO6040 6264887 - 6265396 + | MarR family transcriptional regulator BRADO6041 6265393 - 6266124 + | putative two-component transcriptional regulator TERM 4178 6266289 - 6266344 + F 91 -16.1 -3.62478 | gap 1 GGAGCGACATGCGAG CCGGGTGAGGGGTATGCGTCCGCAGG CGAGA TC-GCGGTGACAGACCCCTCACCCGG TTTCGAACTTCGTTC TERM 4179 6266392 - 6266364 - f 83 -14.6 -3.53761 | overlap 6266365 6266367 6266381 GAACTTCGTTCGAAA CCACCCTCTCCC ACAAG GGGAGAGGGTGC ACCGCTCCTGCGGCG TERM 4180 6266391 - 6266365 - f 86 -18.1 -2.72043 | overlap 6266364 6266367 6266381 AACTTCGTTCGAAAC CACCCTCTCCC ACAAG GGGAGAGGGTG CACCGCTCCTGCGGC TERM 4181 6266389 - 6266367 - f 77 -14.9 -2.90496 | overlap 6266365 6266364 6266381 CTTCGTTCGAAACCA CCCTCTCCC ACAAG GGGAGAGGG TGCACCGCTCCTGCG BRADO6042 6266429 - 6267832 + | putative two-component sensor histidine kinase BRADO6043 6268829 - 6267846 - | putative biphenyl-2,3-diol 1,2-dioxygenase (23OHBP oxygenase) (2,3-dihydroxybiphenyl dioxygenase) (DHBD) BRADO6044 6268961 - 6269761 + | DNA-binding transcriptional activator MhpR BRADO6045 6269831 - 6271354 + | 3-(3-hydroxyphenyl)propionate hydroxylase BRADO6046 6271386 - 6272237 + | bifunctional enzyme with isomerase/decarboxylase activity BRADO6047 6272301 - 6273527 + | ABC transporter substrate-binding protein BRADO6048 6274373 - 6273834 - | putative signal peptide TERM 4182 6274160 - 6274198 + g 71 -13.9 -2.80935 | overlap 6274153 6274153 6274161 6274170 AGCAGACCTGCTGCG CCATCGGCGAGGCCATG TTGTT CATGTCCTTGTCGGTGG TCTCGTCGGTGCAGT BRADO6049 6274760 - 6274455 - | putative signal peptide BRADO6050 6274930 - 6275394 + | putative signal peptide TERM 4183 6275434 - 6275453 + F 100 -11.4 -5.29445 | ATCACGGGTGACGAT CGGCTGCT CCCG GGCAGCCG TTTTTGTTCTTGAAA TERM 4184 6275625 - 6275650 + G 77 -14.1 -3.38768 | gap 1, opp_overlap 6275632 AGGCTCAGGACCGCC GTCAGAACGCGC CGG GCGCGTTC-GAC TTCTACGTGCTGTCG BRADO6051 6275516 - 6276220 + | putative ribonuclease T2 family protein TERM 4185 6276523 - 6276484 - g 75 -14.2 -3.27022 | gap 1, opp_overlap 6276488 6276504 CTCACCGGAGACGAA GCCACGCGCAG-CGGCGAG TAT CTCACCGGCATCGCGCGGC TGCTGCAGGCGCGCC BRADO6052 6276325 - 6277185 + | hypothetical protein cspA 6277438 - 6277653 + | cold shock protein, DNA binding TERM 4186 6277848 - 6277825 - T 100 -16 -5.626 | opp_overlap 6277822 6277840 6277846 CACGCGACAAAAAAA TCCCGGCCGC GCGA GCAGCCGGGA GGATGTCGTTCGACT BRADO6054 6278549 - 6277905 - | putative outer membrane protein precursor uvrC 6278802 - 6280868 + | excinuclease ABC subunit C TERM 4187 6281076 - 6281047 - f 80 -14.3 -3.14344 | gap 1 GATCGCGGTTATGAA TTCCGGGCTCGCCC TGC GGGCGC-CCCGGAA TGACGTGGATGGGCC BRADO6056 6281179 - 6281514 + | hypothetical protein pgsA 6281788 - 6282384 + | putative CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase moaD 6282381 - 6282632 + | molybdenum cofactor biosynthesis protein D moaE 6282655 - 6283119 + | molybdenum cofactor biosynthesis protein E BRADO6060 6283116 - 6284093 + | N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase BRADO6061 6284386 - 6285729 + | beta alanine--pyruvate transaminase TERM 4188 6285754 - 6285791 + F 83 -15.8 -3.14211 | gap 1, opp_overlap 6285762, overlap 6285762 6285787 CATCGTCATCAATCA CGAC-AAAATGGCGGCC CCCGT GGCCGCCATTTTCGTTG TTCCTCCAACGACGT TERM 4189 6285782 - 6285762 - f 100 -14 -4.51097 | opp_overlap 6285754 6285762 TCAATCACGACAAAA TGGCGGCC CCCGT GGCCGCCA TTTTCGTTGTTCCTC TERM 4190 6285762 - 6285782 + F 100 -14 -4.5774 | opp_overlap 6285762, overlap 6285754 TCAATCACGACAAAA TGGCGGCC CCCGT GGCCGCCA TTTTCGTTGTTCCTC TERM 4191 6285949 - 6285900 - f 81 -12.1 -3.9243 | gap 1, overlap 6285901 CAACGCGTCAAACAA CCTCGAGATTCCGGGTTCAAGGCC TGC GGCCTTGC-CCCGGAATCGCAGCG CCTGCGACGAAGTCG TERM 4192 6285947 - 6285901 - f 79 -15.3 -2.94976 | gap 2, overlap 6285900 AACGCGTCAAACAAC CTCGAGATTCCGGGTTCAAGGCC TGC GGCCTTGC-CCCGGAATCGC-AG CGCCTGCGACGAAGT BRADO6062 6286149 - 6286670 + | hypothetical protein TERM 4193 6286674 - 6286718 + F 73 -13.3 -3.14132 | opp_overlap 6286676 CGCGGCGCCTGAGAG GAGCGGCAGCGGCAGGGGGGC ATC GCTCGCGTGCCGCCGCCGCGG TTGATCGAACAAACA TERM 4194 6286716 - 6286676 - f 90 -20.3 -2.62184 | opp_overlap 6286674 CGGCGCCTGAGAGGA GCGGCAGCGGCAGGGGGGC ATC GCTCGCGTGCCGCCGCCGC GGTTGATCGAACAAA TERM 4195 6286994 - 6287007 + G 76 -2.4 -4.84761 | GTCGCGCAGCATGAT TCGT ATCTCC ACGA TTTTTATCGCCATCT BRADO6063 6286989 - 6288575 + | EAL domain-containing protein BRADO6064 6288591 - 6289445 + | haloacid dehalogenase-like family hydrolase TERM 4196 6289495 - 6289460 - T 100 -17.1 -4.11394 | gap 1, opp_overlap 6289465 6289467, overlap 6289467 ACCGGATCCTGAAAA TGAAAA-ACGCCCGGC CAAGC GCCGGGCGTCTTTTCA TCTCGAGATTGATCA TERM 4197 6289465 - 6289489 + T 95 -12.8 -4.3467 | opp_overlap 6289460 6289467, overlap 6289467 ATCCTGAAAATGAAA AACGCCCGGC CAAGC GCCGGGCGTC TTTTCATCTCGAGAT TERM 4198 6289487 - 6289467 - T 100 -15.4 -5.0925 | opp_overlap 6289467 6289465, overlap 6289460 CCTGAAAATGAAAAA CGCCCGGC CAAGC GCCGGGCG TCTTTTCATCTCGAG TERM 4199 6289467 - 6289487 + T 90 -15.4 -3.77806 | opp_overlap 6289460 6289467, overlap 6289465 CCTGAAAATGAAAAA CGCCCGGC CAAGC GCCGGGCG TCTTTTCATCTCGAG BRADO6065 6289914 - 6289519 - | putative response regulator receiver (CheY-like protein) TERM 4200 6289952 - 6289964 + H 72 -7.7 -4.14243 | overlap 6289948 CAACGCGTACGCTGT TACCG GAA CGGTA TTTTCGGCTCAGGTC ribF 6290182 - 6291162 + | riboflavin biosynthesis protein ribF; bifunctional: flavokinase; FAD synthetase TERM 4201 6291344 - 6291392 + F 71 -13.2 -2.98015 | overlap 6291346 6291346 CACCATCGGCATTAG CGGCCCGG-CTTCCGCCTGAGCTT ATC GAGCTC-GGCGCAAGACCGGGATG TCTCTGCTCGTTCCG ileS 6291469 - 6294468 + | isoleucyl-tRNA synthetase lspA 6294663 - 6295160 + | lipoprotein signal peptidase (prolipoprotein signal peptidase) (SPase II) (Signal peptidase II) BRADO6069 6295365 - 6296030 + | putative signal peptide TERM 4202 6296062 - 6296035 - f 74 -12.6 -3.37879 | overlap 6296036 AGGAACGGTAAGCAA CGGTGACGGCGC GGAT GCGCCGCCTCCA CCCTGCAATACCGGC TERM 4203 6296061 - 6296036 - f 71 -13.9 -2.62246 | overlap 6296035 GGAACGGTAAGCAAC GGTGACGGCGC GGAT GCGCCGCCTCC ACCCTGCAATACCGG TERM 4204 6296133 - 6296151 + F 91 -12.4 -4.36914 | AAATTTAATGTCTTC CGGCGGCA CCA TGTCGCCG TTTTGTGACGCCGGG TERM 4205 6296821 - 6296869 + G 70 -3.9 -4.56597 | gap 3, opp_overlap 6296834, overlap 6296834 6296855 TCATCGGCTGGAGAC CGGAGATCGAGAAGCTCAGCCGCG AGGA CGCG-CTG-GCGT-TCTATCGCCG TTTTTACGCGCCCAA BRADO6070 6296238 - 6297623 + | putative Zn-dependent protease BRADO6071 6297623 - 6299002 + | putative Zn-dependent protease TERM 4206 6299004 - 6299022 + F 74 -13.2 -3.34398 | opp_overlap 6299003 6299007, overlap 6299007 CGAAGACGAACTGAG GAAGCAGC GTC GCTGCTTC TGTTTAACGAGACGC TERM 4207 6299007 - 6299019 + F 71 -9.1 -3.81488 | opp_overlap 6299007 6299003, overlap 6299004 AGACGAACTGAGGAA GCAGC GTC GCTGC TTCTGTTTAACGAGA TERM 4208 6299060 - 6299080 + F 93 -14 -4.24204 | CTAGCGAGTTCGTCA TGCCCGGG CTTGT CCCGGGCA TTTTGCGTATCGATC TERM 4209 6299893 - 6299867 - f 93 -19.4 -3.28712 | CGTCGTCCCGGACAA GCCACGACGCGC GGA GCGCGACGTGGC GCCGATCCCGGACCC BRADO6073 6300113 - 6300532 + | hypothetical protein TERM 4210 6300911 - 6300923 + F 74 -9.1 -3.885 | TCGGGACGGCGTGCG GCGCA ATA TGCGC TTCTTCTCTGCGGAT BRADO6074 6300983 - 6301300 + | putative cytochrome c BRADO6075 6301302 - 6301697 + | putative lactoylglutathione lyase TERM 4211 6301802 - 6301828 + G 76 -15 -3.12351 | opp_overlap 6301779 6301776 6301774 TCTTTCTCAAGGGCG CGGCCGCGACCG TGC CGGCCGCCGCCG TTGCCTCTGCGACCG BRADO6076 6301747 - 6302295 + | putative signal peptide BRADO6077 6302334 - 6303902 + | oxidoreductase BRADO6078 6304430 - 6304119 - | hypothetical protein TERM 4212 6305696 - 6305651 - g 80 -17.5 -2.71144 | gap 1 CACCGCCGCCAATGA CGGCGGCGCGACCATCGCGGCG TTC CGCC-CGGCGTTCACGCCACCG CGGCCGAGCGCGGGA mutL 6304635 - 6306476 + | DNA mismatch repair protein TERM 4213 6306654 - 6306617 - T 78 -4.7 -4.74132 | opp_overlap 6306617 6306636 6306647, overlap 6306622 AGATGTGAGGAAAAA GAATGGCGTGGCGAGGC TTGT GCGTCCCAACGCAATCC TGTGGTTATGGGCCC BRADO6080 6307255 - 6306701 - | putative methyltransferase BRADO6081 6309529 - 6307478 - | putative pseudouridine synthase, Rsu:RNA-binding S4:pseudouridine synthase TERM 4214 6309713 - 6309697 - g 89 -15.1 -4.07885 | opp_overlap 6309696 6309695 GATTTGGCCCTAAAA GCGGCCG AAT CGGCCGC AATTTCCGGCGAGGT BRADO6082 6309661 - 6310107 + | putative cytidine and deoxycytidylate deaminase BRADO6083 6311015 - 6310110 - | putative hydrolase BRADO6084 6312344 - 6311043 - | putative cytochrome p450-like enzyme TERM 4215 6312231 - 6312206 - G 75 -11.7 -3.6502 | GACGTTCGACCCAAA GCAGCGGCGCG CGCT CGCGCAGCAGC GCGCAGGCGTGCTCC BRADO6085 6313042 - 6312344 - | putative S-adenosyl-L-methionine (SAM)-dependent methyltransferase BRADO6086 6313371 - 6313039 - | hypothetical protein BRADO6087 6316815 - 6313585 - | putative adenylate cyclase TERM 4216 6316407 - 6316376 - G 75 -13.1 -3.48395 | gap 1 AGCGCGCCGAGACAA CCGCGTACCGCATG GTCCT CATGCGGCAC-CGG GGCCCCGAACAGCGC purD 6318254 - 6316971 - | phosphoribosylamine--glycine ligase TERM 4217 6317518 - 6317536 + g 71 -9 -3.76224 | GGCAGGATGATGCGT TTCATGAT CTG ATCATGAA TTTCCTGCGTGACGA BRADO6089 6318639 - 6318325 - | putative transcriptional regulator BRADO6090 6319193 - 6318645 - | hypothetical protein BRADO6091 6320131 - 6319208 - | putative alpha/beta hydrolase superfamily protein TERM 4218 6319748 - 6319784 + g 80 -16 -3.31144 | gap 1 GGGCTGCGTCGGCAC CGATCT-GCGGACCTCG GCGA CGAGGTCGGCGAGATCG TTCTCGAGCTGGCCG TERM 4219 6321471 - 6321501 + G 74 -12.4 -3.53811 | GGCTGTCGCTGTCGG CGCGCGCGCTGCTG CAC CGGCGCCGCGAGCG TTTCGAGGCGCTCGA xseA 6320327 - 6321943 + | exodeoxyribonuclease VII large subunit BRADO6093 6322775 - 6321951 - | putative dienelactone hydrolase family protein TERM 4220 6322389 - 6322403 + g 70 -4.2 -4.56597 | overlap 6322344 6322344 CGGCATCGCCCAGGA TTGCTG CGT CAGCCA TTTTTGCGCGGCGAC TERM 4221 6322571 - 6322546 - G 74 -12.5 -3.58343 | TTGAGGAGGTCCAAA GCCCAGTCGCG GTAG CGCGGCTGGAC CGGCTCGGAGCGACC BRADO6094 6322946 - 6323188 + | hypothetical protein lpxK 6324192 - 6323185 - | tetraacyldisaccharide 4'-kinase (Lipid A 4'-kinase) kdtA 6325492 - 6324185 - | 3-deoxy-D-manno-octulosonic-acid transferase (KDO transferase) BRADO6097 6326255 - 6325485 - | hypothetical protein BRADO6098 6326512 - 6326273 - | hypothetical protein BRADO6099 6327346 - 6326600 - | putative inositol monophosphatase family protein BRADO6100 6328799 - 6327405 - | putative Zn-dependent protease, pmbA-like protein TERM 4222 6329120 - 6329152 + G 79 -13.3 -3.65529 | opp_overlap 6329102, overlap 6329122 GCGGAAGCAATTCCG CTGGGTCGGGCCGCG TCC TGCGGCTCGACCCTC TTTCCCTGCCCATCT TERM 4223 6329122 - 6329150 + G 100 -20.3 -3.40775 | overlap 6329120 GGAAGCAATTCCGCT GGGTCGGGCCGCG TCC TGCGGCTCGACCC TCTTTCCCTGCCCAT TERM 4224 6329514 - 6329466 - g 81 -11.1 -4.07618 | gap 3 GCTTCAAGAACCAAA GCGTGA--GGCT-GCGCCGCGGCG CCGG CGCCGCAACGCCATCCGCTCACGC CGTCCACGTTTCCTG BRADO6101 6329083 - 6329607 + | hypothetical protein ubiA 6330540 - 6329608 - | prenyltransferase BRADO6103 6331211 - 6330537 - | putative signal peptide TERM 4225 6330647 - 6330669 + g 85 -16.2 -3.40299 | CGTCGCTGAGACCGG GCGCGGCGGC CGG GCCGCCGCCC TTCTGCATCTGCTCG TERM 4226 6331121 - 6331135 + g 70 -8.5 -3.89524 | opp_overlap 6331132 TCTGGCCCGGCAGCG GCGCG GGAAA CGCGC TTTGTGCCATCGCCT BRADO6104 6331860 - 6331447 - | hypothetical protein TERM 4227 6332799 - 6332849 + G 75 -11.6 -3.72576 | overlap 6332803 GGTGACCAGGTTGGC GCTCGGGCCGCGGATCCTGCGG GCTGATA CCGCGGGGGTCGCGGCGCTCGC TTTGCTGCAGGCAAC BRADO6105 6332143 - 6332892 + | hypothetical protein TERM 4228 6333774 - 6333753 - g 75 -9.3 -4.1196 | AATCCACCCTGAAAA GCGGCGCAC TGCC GCGCGACGC GCTCGACCGCATCAA hisZ 6333014 - 6334174 + | ATP phosphoribosyltransferase regulatory subunit hisG 6334171 - 6335148 + | ATP phosphoribosyltransferase BRADO6108 6335219 - 6336259 + | glycosyl transferase family protein BRADO6109 6336256 - 6337098 + | putative YdjC-like protein TERM 4229 6337159 - 6337125 - f 78 -6.3 -4.63932 | gap 1, opp_overlap 6337105 6337127 6337128, overlap 6337127 CAGCGGCGAACAAAA TGCC-GGCTGGCCGCG TTTG CGTCGCAAGCCCGGCA GACGCTTTGTCGCAT BRADO6110 6337273 - 6338082 + | hypothetical protein TERM 4230 6338134 - 6338103 - T 93 -18.8 -3.11634 | opp_overlap 6338103 6338109, overlap 6338109 TCTCACACCACGGAA GGAAAAGGCCGCCC CAGG GGGCGGCCTTTTGC TTGATGGCCGGGATG TERM 4231 6338103 - 6338134 + T 93 -18.8 -3.14344 | opp_overlap 6338103 6338109, overlap 6338109 TCTCACACCACGGAA GGAAAAGGCCGCCC CAGG GGGCGGCCTTTTGC TTGATGGCCGGGATG TERM 4232 6338109 - 6338128 + T 100 -16.4 -4.45544 | opp_overlap 6338103 6338109, overlap 6338103 ACCACGGAAGGAAAA GGCCGCCC CAGG GGGCGGCC TTTTGCTTGATGGCC TERM 4233 6338128 - 6338109 - T 100 -16.4 -4.43879 | opp_overlap 6338109 6338103, overlap 6338103 ACCACGGAAGGAAAA GGCCGCCC CAGG GGGCGGCC TTTTGCTTGATGGCC BRADO6111 6338965 - 6338162 - | ErfK/YbiS/YcfS/YnhG family protein TERM 4234 6338727 - 6338749 + g 81 -16.2 -3.21099 | opp_overlap 6338716 TACATCGGCTGCCCC GGCGGCGGCG CGC CGCGGCCGCC TTGCTGATCGCCGAA BRADO6112 6339272 - 6340051 + | putative methyl-accepting chemotaxis protein TERM 4235 6340082 - 6340100 + T 100 -17.4 -4.76041 | opp_overlap 6340082 CACACCCGACAAAAA CGCCGGCG ATC CGCCGGCG TTTTTCATGGATGTC TERM 4236 6340100 - 6340082 - T 100 -17.4 -4.8667 | opp_overlap 6340082 CACACCCGACAAAAA CGCCGGCG ATC CGCCGGCG TTTTTCATGGATGTC BRADO6113 6340651 - 6340142 - | hypothetical protein TERM 4237 6341105 - 6341093 - g 83 -9.1 -4.4078 | opp_overlap 6341095, overlap 6341094 6341095 CTCCGCCAAGGAAAA GCCCT CGC AGGGC GAGGTTGTCGCCGTC groES 6340983 - 6341279 + | co-chaperonin GroES TERM 4238 6341295 - 6341337 + F 76 -9.7 -4.09864 | gap 1, opp_overlap 6341301, overlap 6341296 TTCGAACCGTCTGAT CCG-AAACGCCTGGGGCGGC CACA GCGGCCCCAGGCGATAGCGC TTTTACAACCTCGCT TERM 4239 6341296 - 6341336 + F 71 -13.2 -3.05597 | gap 1, opp_overlap 6341301, overlap 6341295 TCGAACCGTCTGATC CG-AAACGCCTGGGGCGGC CACA GCGGCCCCAGGCGATAGCG CTTTTACAACCTCGC TERM 4240 6341330 - 6341301 - f 100 -20.7 -3.59979 | opp_overlap 6341296 6341295 CCGTCTGATCCGAAA CGCCTGGGGCGGC CACA GCGGCCCCAGGCG ATAGCGCTTTTACAA TERM 4241 6342624 - 6342593 - g 77 -10.8 -3.8917 | overlap 6342596 GGTCAAGGAGAAGAA GGACCGCGTCGAGG ACGC CCTCAACGCGACAC GCGCCGCGGTGCAGG TERM 4242 6342621 - 6342596 - g 70 -13.3 -3.01074 | overlap 6342593 CAAGGAGAAGAAGGA CCGCGTCGAGG ACGC CCTCAACGCGA CACGCGCCGCGGTGC groEL 6341415 - 6343058 + | chaperonin GroEL TERM 4243 6343098 - 6343121 + F 100 -18.2 -4.57837 | opp_overlap 6343101 TCACGAGACGTTCAC GAAGGCCGCC TCCG GGCGGCCTTC TTTTTGGCCGAGTGT TERM 4244 6343118 - 6343101 - f 76 -14.1 -3.16191 | opp_overlap 6343098 CGAGACGTTCACGAA GGCCGCC TCCG GGCGGCC TTCTTTTTGGCCGAG TERM 4245 6343184 - 6343163 - f 85 -14.5 -3.61178 | TGCAGTGATTGCAAA TCGGCGCTA CAGC TAGCGCCGA TTCCGCTCCCACAAG BRADO6116 6343209 - 6344399 + | putative signal peptide BRADO6117 6345048 - 6344698 - | hypothetical protein TERM 4246 6344771 - 6344799 + g 90 -18.9 -3.21416 | overlap 6344772 CCCTGGCGCTTCCAG TTGGTCGCCGCGC TCA GCGCGGCGATCAG TTCGTCATCGGCCTG TERM 4247 6344772 - 6344798 + g 95 -20.2 -2.52635 | overlap 6344771 CCTGGCGCTTCCAGT TGGTCGCCGCGC TCA GCGCGGCGATCA GTTCGTCATCGGCCT TERM 4248 6345257 - 6345232 - R 100 -23.3 -3.97308 | opp_overlap 6345232 6345236 TCCAAACATAGCAAA CCCCGCGCCGC GGTT GCGGCGCGGGG TTTTTGTCGCAGGCG TERM 4249 6345232 - 6345257 + r 100 -23.3 -4.82901 | opp_overlap 6345232, overlap 6345236 TCCAAACATAGCAAA CCCCGCGCCGC GGTT GCGGCGCGGGG TTTTTGTCGCAGGCG glcA 6346942 - 6345278 - | LctP family glycolate permease TERM 4250 6346071 - 6346093 + g 76 -14.8 -3.14132 | CGGTCGAGCGGCTTG GCGGCCGCCA TGG TGGCGGCCGA TTCGTCGCGGCCGCG BRADO6119 6347262 - 6349022 + | putative ABC transporter (fused ATP-binding and permease components) TERM 4251 6349231 - 6349199 - T 100 -17.2 -4.36914 | gap 1, opp_overlap 6349204, overlap 6349204 GGCGTCGGCACAAAA GCAAAGGGCGGCAGA TTGC TCTGCCGCCCTTT-C GAAAAGTCCGATCCG TERM 4252 6349227 - 6349204 - T 100 -18.2 -4.26881 | opp_overlap 6349204, overlap 6349199 CGGCACAAAAGCAAA GGGCGGCAGA TTGC TCTGCCGCCC TTTCGAAAAGTCCGA TERM 4253 6349204 - 6349227 + T 100 -18.2 -3.54424 | opp_overlap 6349199 6349204 CGGCACAAAAGCAAA GGGCGGCAGA TTGC TCTGCCGCCC TTTCGAAAAGTCCGA BRADO6120 6350251 - 6349259 - | hypothetical protein TERM 4254 6350052 - 6350066 + g 72 -11.4 -3.51825 | opp_overlap 6350052 6350051 6350049 CGCGGCTCGAAATAG GCCGTC ACG GACGGC TTGTGGTTCGACTGG TERM 4255 6350392 - 6350376 - R 84 -2.2 -5.27477 | gap 1, opp_overlap 6350378 6350379 6350389, overlap 6350377 6350379 6350380 AGGTGAAGCAAAAAA GCACGGC ATCT GCCGC-C TTTTTGGGCGTTTTG TERM 4256 6350645 - 6350607 - R 100 -24.7 -4.16016 | opp_overlap 6350581 6350581, overlap 6350611 CGAGTCGTCAACAAA CAAACGAGGCCGCAGCG CTTGT CGCTGCGGCCTCGTCCG GCCCGTCTCGATGAT TERM 4257 6350641 - 6350611 - R 100 -24.1 -4.67607 | opp_overlap 6350581 6350581, overlap 6350607 TCGTCAACAAACAAA CGAGGCCGCAGCG CTTGT CGCTGCGGCCTCG TCCGGCCCGTCTCGA BRADO6121 6351135 - 6350668 - | hypothetical protein TERM 4258 6351043 - 6351079 + g 73 -3.5 -4.62561 | overlap 6351044 6351045 CTTCTTGGCGGACTT CTTGGTGCCCTTGGCCG ACT TGGCCTGGGCCATCAGC TTCTTTTCTTTCTTG glcF 6352529 - 6351210 - | glycolate oxidase subunit, (Fe-S)protein, GlcF TERM 4259 6352009 - 6351977 - G 78 -14.7 -3.34398 | overlap 6351975 CCTGCGCGGGAAACA CGCTGCCGCCCGAGG GCC CCGGCGGCGGCAGCG CCGCGGCCGGCGCGA glcE 6353764 - 6352526 - | glycolate oxidase, subunit GlcE BRADO6125 6354238 - 6354417 + | hypothetical protein BRADO6126 6354414 - 6354569 + | hypothetical protein BRADO6127 6354716 - 6355885 + | hypothetical protein TERM 4260 6356288 - 6356298 + GF 71 -8.2 -3.85698 | opp_overlap 6356288 CGCACAATTACTTAA CGGC GGA GCCG TTTCTAAGAGAAAAA BRADO6128 6355860 - 6356321 + | hypothetical protein BRADO6129 6356400 - 6357023 + | hypothetical protein TERM 4261 6357964 - 6358022 + T 81 -14.1 -3.5394 | gap 4, overlap 6357960 6358000 6358001 6358015 GCGCACGATCGCAGT GGC-GC-CGTGCCCACCGTCT-TGA-CGC ACGGG GCGCTGATGGACGGTGGGCACGCGCCGCC TTTCGGCGGCGCTTT TERM 4262 6358000 - 6358050 + T 84 -13.9 -3.79251 | gap 1, overlap 6357964 6358001 6358015 ACGCACGGGGCGCTG ATGGACGGTGGGCA-CGCGCCGCC TTTC GGCGGCGCTTTGCCCACCCTACGA TTTCGTCGTCGCGTG TERM 4263 6358001 - 6358049 + T 87 -17.4 -2.87229 | gap 1, overlap 6357964 6358000 6358015 CGCACGGGGCGCTGA TGGACGGTGGGCA-CGCGCCGCC TTTC GGCGGCGCTTTGCCCACCCTACG ATTTCGTCGTCGCGT TERM 4264 6358015 - 6358034 + T 91 -16.4 -3.53811 | overlap 6357964 6358001 6358000 ATGGACGGTGGGCAC GCGCCGCC TTTC GGCGGCGC TTTGCCCACCCTACG glcD 6359714 - 6358221 - | glycolate oxidase, subunit GlcD BRADO6132 6359917 - 6360312 + | cytochrome C TERM 4265 6360344 - 6360364 + T 100 -15.4 -5.0925 | CGCTCCGCCTTCGAA GCCCCGGC CGCGC GCCGGGGC TTTTTCGTTTTCAAG BRADO6133 6361334 - 6360375 - | putative alpha/beta hydrolase; putative haloalkane dehalogenase. BRADO6134 6361586 - 6361768 + | hypothetical protein BRADO6135 6362090 - 6361830 - | hypothetical protein BRADO6136 6362793 - 6362191 - | TPR repeat-containing protein rpmJ 6363057 - 6362932 - | 50S ribosomal protein L36 BRADO6138 6363324 - 6364208 + | putative amidohydrolase BRADO6139 6364223 - 6364690 + | YbaK/prolyl-tRNA synthetases associated domain-containing protein BRADO6140 6365612 - 6364704 - | LysR family transcriptional regulator BRADO6141 6365740 - 6366438 + | putative Pirin family protein wrbA 6366475 - 6367074 + | TrpR binding protein WrbA TERM 4266 6367081 - 6367115 + T 84 -17.2 -2.78384 | CATGGCTGATGCGAC CGGGGCGGCACTTC TGGCTTC GAAGTGCCGCCCCA TCTCATCGAAAGAAA BRADO6143 6367908 - 6367291 - | hypothetical protein TERM 4267 6367623 - 6367603 - G 71 -12.6 -3.21912 | GTCGCAACGGATGAA GATGCCGC TGTTG GCGGCATC GTCGACCCAGAACTC BRADO6144 6368844 - 6367984 - | D-amino acid aminotransferase TERM 4268 6368593 - 6368616 + g 86 -9.6 -4.67904 | overlap 6368576 6368587 GACCATGCCCTGGTC GAGTTGGTTG CGCG CGACCAGCTC TTTTTGCAGTTCCTC gltL 6369844 - 6369113 - | glutamate/aspartate ABC transporter ATP-binding protein gltK 6370546 - 6369854 - | glutamate/aspartate ABC transporter (permease protein) gltJ 6371279 - 6370548 - | glutamate/aspartate ABC transporter (permease protein) TERM 4269 6371338 - 6371380 + r 83 -14.7 -3.53343 | overlap 6371339 GACGTCGCCACGAGC GACGCTGCGCTCCACTCCC CGCAA GGGGGAGGGGCGCAGCGAG TTTGCCGCGGGAGTT TERM 4270 6371339 - 6371379 + r 86 -18.2 -2.71791 | overlap 6371338 ACGTCGCCACGAGCG ACGCTGCGCTCCACTCCC CGCAA GGGGGAGGGGCGCAGCGA GTTTGCCGCGGGAGT gltI 6372318 - 6371404 - | glutamate/aspartate ABC transporter (substrate binding protein) BRADO6149 6374262 - 6372880 - | hypothetical protein BRADO6150 6376724 - 6375060 - | putative thiamine pyrophosphate-requiring enzyme; putative benzoylformate decarboxylase TERM 4271 6376795 - 6376829 + r 70 -12.2 -3.18582 | opp_overlap 6376795 6376799, overlap 6376799 TGCGAGCGAAGCGAA GCAATCCAGGGGCG GCGCGCG CGACTCTGGATTGC TTGGTCGCTGCGCTC BRADO6151 6377998 - 6376874 - | putative NADH-dependent flavin oxidoreductase TERM 4272 6378447 - 6378419 - g 75 -11.7 -3.62522 | overlap 6378420 6378422 GAACGCGGTGAAGAA GGATCTCGCCGCA CTT CGCAGCGAGATCG AGAAGCCGAGGAAGG TERM 4273 6378446 - 6378420 - g 72 -15.2 -2.77192 | overlap 6378419 6378422 AACGCGGTGAAGAAG GATCTCGCCGCA CTT CGCAGCGAGATC GAGAAGCCGAGGAAG BRADO6152 6378099 - 6378488 + | LysR family transcriptional regulator BRADO6153 6378635 - 6379483 + | NAD(P)-dependent oxidoreductase BRADO6154 6380680 - 6379484 - | hypothetical protein TERM 4274 6380030 - 6379994 - G 89 -17.1 -3.49951 | overlap 6379968 6379995 GACATCGGGAGACAA GGCTGCCGCGGCCGCGC CGA GCACGGCCGCGCCGGCG ATCCGCAGCACCGTC TERM 4275 6380029 - 6379995 - G 95 -20.6 -2.69649 | overlap 6379968 6379994 ACATCGGGAGACAAG GCTGCCGCGGCCGCGC CGA GCACGGCCGCGCCGGC GATCCGCAGCACCGT BRADO6155 6381684 - 6380680 - | hypothetical protein TERM 4276 6381843 - 6381806 - R 100 -25.7 -2.71011 | overlap 6381792 6381793 ACGCGCGTTGAACGA CGGCAGGCGGCGGATGC CGCC GCATCCACCGCCTGCCA TCACGGACCTCGTGG BRADO6156 6382179 - 6381904 - | hypothetical protein BRADO6157 6382942 - 6382244 - | putative PspA/IM30 family protein TERM 4277 6382993 - 6383030 + H 76 -9.9 -3.83437 | opp_overlap 6383013 6383014, overlap 6382991 6382994 6383014 TGTTATAGCGCAACC CTGAGCGTTGCTCAAGA GAAT TTTTGAGCGTCGCTCAA TATTTTGGTTAATGA TERM 4278 6382994 - 6383029 + H 74 -13.4 -2.89339 | opp_overlap 6383013 6383014, overlap 6382991 6382993 6383014 GTTATAGCGCAACCC TGAGCGTTGCTCAAGA GAAT TTTTGAGCGTCGCTCA ATATTTTGGTTAATG TERM 4279 6383014 - 6383032 + H 74 -6 -4.46615 | opp_overlap 6383014 6383013, overlap 6382994 6382993 GTTGCTCAAGAGAAT TTTTGAGC GTC GCTCAATA TTTTGGTTAATGATG TERM 4280 6383170 - 6383140 - g 72 -12 -3.53012 | gap 1, overlap 6383122 6383163 GCTCGCGGGCCTAAA GACGCGCGATCTC GCCCAG GAGATCG-GCGTC GCCAACGGCGCAGTC BRADO6158 6383108 - 6383659 + | TetR family transcriptional regulator BRADO6159 6384463 - 6385650 + | putative branched-chain amino acid ABC transporter (substrate-binding protein) BRADO6160 6386391 - 6385864 - | hypothetical protein TERM 4281 6386700 - 6386737 + G 76 -14.7 -3.14564 | gap 1 TCGGTCTTGTGATGT CGGC-CGGCGGCGCCGGC TTC GCCATCGCCACCGCGCCG TTCGTCCCGGCATCC BRADO6161 6386534 - 6387694 + | AraC family transcriptional regulator TERM 4282 6387712 - 6387678 - f 71 -12.9 -3.05844 | overlap 6387697 6387699 CGGCCGATTTGAAGA TTCGGCAAGCCGACT GAAAG ATTCGGCTGGCCGAA TTCGCGATCCGGCCG BRADO6162 6387789 - 6389042 + | putative acyltransferase 3 family protein; putative glucans biosynthesis protein C dht 6389175 - 6390629 + | dihydropyrimidinase BRADO6164 6390800 - 6391072 + | hypothetical protein exoB 6392100 - 6391105 - | UDP-glucose 4-epimerase (UDP-galactose 4-epimerase) (galactowaldenase) TERM 4283 6392667 - 6392614 - g 75 -11.6 -3.65351 | gap 1 GCATCGTGAGTGAAA CGAGCAACGTCGAT-GCGGCGTCGC GCGCG GCAGCGCCGCAACCGCCCTCGCCCG CTGCGTCGCCCGGCC TERM 4284 6393284 - 6393247 - g 72 -13.3 -3.14051 | gap 1, overlap 6393245 6393279 TCACCGGCACCAAGA CGCAGC-GCGGCGCCGAC CTC GCCGGCGCCAAAGCGGCG CTGGCCGCCGCCAGG TERM 4285 6393295 - 6393279 - g 70 -10.8 -3.53012 | overlap 6393247 6393245 CTCGCCGGCGCCAAA GCGGCG CTGGC CGCCGC CAGGCTGAAGCTCGG BRADO6166 6392604 - 6393734 + | HlyD family secretion protein BRADO6167 6393721 - 6395370 + | putative transport protein (permease) BRADO6168 6395633 - 6397195 + | putative polyphosphate-selective porin O TERM 4286 6397244 - 6397225 - T 86 -16.4 -3.21099 | opp_overlap 6397225 GCTCTTGACGATGAA GGCCCGGC ATCT GCCGGGCC TTTTGCGTTTACGAT TERM 4287 6397225 - 6397244 + T 100 -16.4 -4.35926 | opp_overlap 6397225 GCTCTTGACGATGAA GGCCCGGC ATCT GCCGGGCC TTTTGCGTTTACGAT BRADO6169 6398919 - 6397444 - | hypothetical protein BRADO6170 6399086 - 6399919 + | putative adenylate/guanylate cyclase BRADO6171 6400594 - 6399992 - | TetR family transcriptional regulator BRADO6172 6400786 - 6402018 + | AcrB/AcrD/AcrF family mulitdrug efflux protein BRADO6173 6402519 - 6405701 + | AcrB/AcrD/AcrF family mulitdrug efflux protein TERM 4288 6405896 - 6405927 + F 77 -15.9 -2.64616 | opp_overlap 6405848, overlap 6405889 6405888 AGCACGTTGCGCCGA CCCGGCGGCCT TTCCCGCACC AGGCCGCCGGG TCATCTGACTGAAGG BRADO6174 6405952 - 6406158 + | hypothetical protein BRADO6175 6407086 - 6406217 - | hypothetical protein BRADO6176 6407248 - 6407682 + | MarR family transcriptional regulator BRADO6178 6408122 - 6409237 + | spermidine/putrescine ABC transporter substrate-binding protein TERM 4289 6409250 - 6409277 + F 74 -14.8 -2.53164 | overlap 6409243 6409249 TGAGGCCATCGCCGA TCGGGCGCGCGA TCCT TCGCGCGTCCGC CTTCCTCGTGCATGA BRADO6179 6409328 - 6410422 + | sperimidine/putrescine ABC transporter ATP-binding protein TERM 4290 6411283 - 6411303 + G 77 -14 -3.43785 | overlap 6411263 GCGGCGGCCTCGCTC GGCGCGCA TCCCT TGCGCGCC TTCCTTCATGTGCTG BRADO6180 6410458 - 6411567 + | spermidine/putrescine ABC transporter permease TERM 4291 6411644 - 6411668 + G 81 -11.4 -3.91144 | overlap 6411646 GCTGGTGGCCGTGCT GCCGCTGTCG CTGAC CGACAGCGTC TTTCTCAACTATCCC TERM 4292 6411646 - 6411666 + G 74 -12.6 -3.54447 | overlap 6411644 TGGTGGCCGTGCTGC CGCTGTCG CTGAC CGACAGCG TCTTTCTCAACTATC TERM 4293 6412065 - 6412088 + G 74 -10.2 -3.82378 | gap 1, overlap 6412067 CAGGCTGCCGCCAGC CTCGG-CGCCG GGC CGGCGACCGTG TTGTTCTCGGTCACT TERM 4294 6412067 - 6412086 + G 72 -11.4 -3.49568 | gap 1, overlap 6412065 GGCTGCCGCCAGCCT CGG-CGCCG GGC CGGCGACCG TGTTGTTCTCGGTCA BRADO6181 6411564 - 6412343 + | spermidine/putrescine ABC transporter permease BRADO6182 6413414 - 6412515 - | putative UDP-glucose 4-epimerase BRADO6183 6414023 - 6413565 - | hypothetical protein BRADO6184 6413968 - 6414303 + | hypothetical protein TERM 4295 6414382 - 6414355 - fH 86 -18.5 -2.53876 | TCTGAGGTGAAGCCA TCGCGGCCTGC GCGTCT GCAGGCCGCGA CAAGACTGCCCGCCC BRADO6185 6414486 - 6414647 + | hypothetical protein BRADO6186 6415838 - 6414717 - | putative Beta-lactamase TERM 4296 6414974 - 6414948 - G 73 -5.9 -4.33785 | gap 1 ATAGCCATAAAAGAA CAGGCCACCGAA CATG TTCG-TCGCCTG AAGCCGGGGCCTGAT TERM 4297 6415344 - 6415362 + g 79 -7.4 -4.45664 | ATGCCATTCGTCATT CTTGTCGT CCC ACGGCAGG TTTTCATTCCATTGC BRADO6188 6417611 - 6416208 - | putative transport system, periplasmic component BRADO6189 6418838 - 6417924 - | LysR family transcriptional regulator BRADO6190 6418949 - 6419593 + | putative acyl carrier protein phosphodiesterase (ACP phosphodiesterase) BRADO6191 6419658 - 6420554 + | putative 3-hydroxyisobutyrate dehydrogenase family protein TERM 4298 6420629 - 6420614 - f 70 -11.8 -3.24747 | CGTCGAGACCACCAA CGCGCG GATC CGCGCG ATGACCCGGCACGAC BRADO6192 6420630 - 6421109 + | putative acetyltransferase BRADO6193 6421255 - 6422448 + | putative lanthionine synthetase C-like protein BRADO6194 6422600 - 6423070 + | putative acetyltransferase BRADO6195 6423738 - 6423328 - | hypothetical protein TERM 4299 6423533 - 6423508 - G 72 -11.9 -3.53012 | gap 1, overlap 6423522 CGCGGTGTTGCGAAA CGGTG-GCCAGA AAG TCCGGCGCACCG GGAAGAGCGCGAAGC BRADO6196 6425934 - 6424627 - | putative glycosyltransferase TERM 4300 6424847 - 6424831 - G 72 -5.1 -4.37092 | ATGCGGCGTATAAAA CTCATTC GTT GGATGAG TAAATCCGGAGATGA TERM 4301 6425421 - 6425442 + g 82 -4.4 -4.87893 | overlap 6425412 GCTTTTCGCCGATCG CACAGGTG AGTCGG CAGCTGTG TTTTTCCTTGAACTT BRADO6197 6435549 - 6425947 - | putative large exoprotein involved in heme utilization or adhesion TERM 4302 6426999 - 6427019 + g 72 -13.3 -3.08464 | CACCCGCGCCGATCT CCAGCGTCA CGT TGGCGCTGG TTACGTAGCTGCTGA TERM 4303 6432609 - 6432596 - G 72 -5.2 -4.30719 | opp_overlap 6432597 GTCTGCGACAACAAA GCGC CGTTCT GCGC CGTCGTATTGACGGT BRADO6198 6436052 - 6435531 - | hypothetical protein BRADO6199 6436910 - 6436326 - | hypothetical protein TERM 4304 6437131 - 6437115 - R 88 -6.5 -5.23316 | opp_overlap 6437115 CATCATATGAAAAAA GGCTTCT ATC AGACGCC TTCATCGATCGATCT TERM 4305 6437395 - 6437414 + r 73 -3.4 -4.8048 | GCGTGCGACTAGCTA CGCCAAGC TTAC GCATTGCG TTTTTGATGTGGAAA TERM 4306 6437550 - 6437563 + r 72 -3.8 -4.58395 | AACATTTTCTAGCCT CCAG CAATAT CTGG TTTTTGGAGCATCGG BRADO6200 6439054 - 6437645 - | HlyD family secretion protein BRADO6201 6441212 - 6439086 - | toxin secretion ABC transporter (ATP-binding and membrane protein); hlyB-like protein BRADO6202 6441479 - 6441288 - | hypothetical protein BRADO6203 6441699 - 6441622 - | hypothetical protein BRADO6205 6442374 - 6441862 - | putative transposase (fragment) BRADO6206 6443114 - 6442851 - | putative conjugal transfer protein, TraD BRADO6207 6443454 - 6443116 - | putative conjugual transfert protein, traC TERM 4307 6444099 - 6444078 - g 72 -8.7 -4.07568 | CGGGTTTGGTCAAAA GGTGCGG GACTGGAA CCGCACC GAGATGGTCGAGCGC BRADO6208 6443614 - 6446625 + | putative conjugal transfer protein; traA BRADO6209 6446753 - 6446968 + | putative prophage CP4-57 regulatory protein BRADO6212 6447449 - 6448738 + | putative phage integrase/recombinase BRADO6213 6449273 - 6448914 - | putative response regulator receiver (CheY-like protein) BRADO6214 6449635 - 6450519 + | putative N-formylglutamate amidohydrolase TERM 4308 6450604 - 6450580 - f 100 -17.2 -5.75342 | TTGGCGCAAAAAAAA GGGCCGCTTG AATGA CAAGCGGCCC AAGTCTAGGGAGGAA TERM 4309 6451444 - 6451420 - g 71 -9.2 -3.8917 | gap 1 GGCCAACTACAAGAA CG-CGGCCGGC GAGC GCCGGCTGTCG GTACGGCGTTGCGAG BRADO6215 6451007 - 6451789 + | putative inositol monophosphatase family protein TERM 4310 6452098 - 6452128 + G 71 -9.6 -3.78775 | opp_overlap 6452087 6452081 6452099, overlap 6452087 6452099 ATAAGCTCGCAACCG ACCTTCTCGAGGCG CGG CGCGCCGAGAAGGA TTTCCTGCTCCGCCG TERM 4311 6452127 - 6452099 - g 73 -15.3 -2.53213 | opp_overlap 6452087 6452098 6452099, overlap 6452087 6452081 TAAGCTCGCAACCGA CCTTCTCGAGGCG CGG CGCGCCGAGAAGG ATTTCCTGCTCCGCC BRADO6216 6451872 - 6453890 + | putative methyl-accepting chemotaxis protein BRADO6217 6454785 - 6453895 - | LysR family transcriptional regulator TERM 4312 6454454 - 6454444 - G 75 -4.6 -4.68994 | ATGAGCACGCAAAAA CGCC GCG AGCG CCTTCGGCAGATGCT BRADO6218 6454871 - 6455644 + | hypothetical protein BRADO6219 6456265 - 6455630 - | LysE family amino acid efflux protein TERM 4313 6457653 - 6457630 - g 70 -2.2 -4.68593 | overlap 6457632 GGGACGAGGCAAAAA GCCTGGCGCT CGAC AGCGTCCGCC TCGACCCGCGCTCCT TERM 4314 6458168 - 6458120 - g 76 -6 -4.57073 | gap 2, opp_overlap 6458123, overlap 6458123 CATCCGGTGGAAAAA CAGGGCCGACCTCGATCACTACCG CGA CGGGC-TGATCAAGGCCGGGC-TG ATTTAAACCAATTAC BRADO6220 6456429 - 6458174 + | putative adenylate cyclase TERM 4315 6459959 - 6459998 + G 73 -12.9 -3.28791 | opp_overlap 6459966 6459968, overlap 6459966 CGATCGAGCGGCTTC TGAGCAACATCCGCTGG CGCAAT CCGGCGGACATTGCTCA TTATCGCGACGGACT BRADO6221 6458290 - 6460098 + | putative adenylate cyclase TERM 4316 6460936 - 6460946 + G 72 -8.2 -4.07568 | CATCATCTGGCGTAT CGGC AAG GCCG TTTTGGGCACCGCGG BRADO6222 6460256 - 6463063 + | putative cytochrome c region BRADO6223 6465633 - 6463111 - | hypothetical protein TERM 4317 6463404 - 6463420 + g 75 -11.5 -3.63515 | GCAGCACCTTGTTGC CGCTGCC GAA GGCGGCG TTGTTCACGGTCGAG BRADO6224 6467233 - 6465647 - | putative NADH dehydrogenase (quinone) BRADO6225 6467349 - 6468236 + | LysR family transcriptional regulator TERM 4318 6468522 - 6468465 - T 89 -17.5 -3.14132 | overlap 6468442 6468484 6468486 GCCGGGTTCGAGGAA TCCTGCGGACGCGCCGAAACACCGGGG TCGA CCCGGGCGGCTCGGCGCGGCGGCAGAT GATGGGCAGCTTCTG BRADO6226 6468780 - 6468631 - | hypothetical protein TERM 4319 6469240 - 6469229 - H 72 -2.2 -4.68209 | AGCCGAAGAAACAAA TCGG CGCG CCAA GCATCCATGGCGAAT BRADO6228 6469581 - 6471269 + | putative sensor histidine kinase; putative HWE histidine kinase family protein BRADO6230 6471543 - 6473102 + | hypothetical protein BRADO6231 6474047 - 6473172 - | putative protein-L-isoaspartate(D-aspartate) O-methyltransferase BRADO6232 6474572 - 6474195 - | hypothetical protein BRADO6233 6475382 - 6474678 - | GntR family transcriptional regulator BRADO6234 6475501 - 6476703 + | branched chain amino acid ABC transporter substrate-binding protein BRADO6235 6477681 - 6476734 - | putative lysophospholipase L2, (lecithinase B) TERM 4320 6477567 - 6477619 + g 73 -14 -3.21099 | opp_overlap 6477555 6477556 6477595 6477596, overlap 6477570 6477595 6477596 AAACGGTGCCCTTGC GCCCCGCGGGCGGCGCCCAGC-GCGC AAA GCGCAGCTCGGCGCCATCAG-GGGTC TTGATGGTGCCGGCG TERM 4321 6477570 - 6477617 + g 78 -15.4 -3.17051 | gap 1, opp_overlap 6477555 6477556 6477595 6477596, overlap 6477567 6477595 6477596 CGGTGCCCTTGCGCC CCGCGGGCGGCGCCCAGC-GCGC AAA GCGCAGCTCGGCGCCATCAGGGG TCTTGATGGTGCCGG TERM 4322 6477814 - 6477789 - H 84 -14.1 -3.74158 | gap 1, overlap 6477771 TGAACCATATCGAAA TCGTGCAGGCCG TCA CGG-CTGCACGA CAGCCCGGCCCGATG hspD 6477874 - 6478350 + | small heat shock protein TERM 4323 6478405 - 6478374 - T 71 -8.6 -3.92075 | opp_overlap 6478380, overlap 6478376 6478380 ACCGCTAGTGAGAAA TACGAACGCCCCGG GATA CCGGGGCGTTTTTT TTTCGTGGAAGGGTG TERM 4324 6478403 - 6478376 - T 73 -11.2 -3.5511 | opp_overlap 6478380, overlap 6478374 6478380 CGCTAGTGAGAAATA CGAACGCCCCGG GATA CCGGGGCGTTTT TTTTTCGTGGAAGGG TERM 4325 6478380 - 6478399 + T 100 -16.4 -6.15828 | opp_overlap 6478376 6478374 6478380 AGTGAGAAATACGAA CGCCCCGG GATA CCGGGGCG TTTTTTTTTCGTGGA TERM 4326 6478399 - 6478380 - T 89 -16.4 -3.50737 | opp_overlap 6478380, overlap 6478376 6478374 AGTGAGAAATACGAA CGCCCCGG GATA CCGGGGCG TTTTTTTTTCGTGGA TERM 4327 6478586 - 6478617 + T 91 -11.6 -4.25104 | gap 1 AAATGCCGGTGATTA CTG-GATCGCCCGGT CAA GCCGGGCGATGACAG TTTTGGTGGCGGCCG BRADO6237 6479691 - 6478663 - | putative signal peptide TERM 4328 6478740 - 6478782 + g 78 -14 -3.53012 | overlap 6478716 6478741 TGGCGGCGGGCGCGA TCGATCCGGTGGTCTGCGGC GCC GCCGCGGCCGACTGGACCGG TTTGGCGACCGCCGG TERM 4329 6478741 - 6478781 + g 75 -15.3 -2.71712 | overlap 6478716 6478740 GGCGGCGGGCGCGAT CGATCCGGTGGTCTGCGGC GCC GCCGCGGCCGACTGGACCG GTTTGGCGACCGCCG gltB 6480265 - 6485001 + | glutamate synthase [NADPH] large chain (NADPH-GOGAT) gltD 6485423 - 6486871 + | glutamate synthase subunit beta TERM 4330 6487099 - 6487142 + T 100 -22.6 -3.06183 | opp_overlap 6487104 6487108, overlap 6487104 6487108 GCGAGGAGCGCAGCG ACGAAGCAATCCAGAGCCGC GCAT GCGACTCTGGATTGCTTCGC TTCGCTCGCAATGAC TERM 4331 6487104 - 6487137 + T 95 -19.7 -3.19192 | opp_overlap 6487104 6487108, overlap 6487099 6487108 GAGCGCAGCGACGAA GCAATCCAGAGCCGC GCAT GCGACTCTGGATTGC TTCGCTTCGCTCGCA TERM 4332 6487137 - 6487104 - T 100 -21.9 -3.18582 | opp_overlap 6487104 6487099 6487108, overlap 6487108 GAGCGCAGCGACGAA GCAATCCAGAGCCGC GCAT GCGACTCTGGATTGC TTCGCTTCGCTCGCA TERM 4333 6487108 - 6487133 + T 76 -13.3 -3.40788 | opp_overlap 6487104 6487108, overlap 6487104 6487099 GCAGCGACGAAGCAA TCCAGAGCCGC GCAT GCGACTCTGGA TTGCTTCGCTTCGCT TERM 4334 6487133 - 6487108 - T 85 -15.5 -3.40867 | opp_overlap 6487108 6487104 6487099, overlap 6487104 GCAGCGACGAAGCAA TCCAGAGCCGC GCAT GCGACTCTGGA TTGCTTCGCTTCGCT BRADO6241 6488155 - 6487340 - | putative N-hydroxyarylamine O-acetyltransferase BRADO6242 6488988 - 6488173 - | putative arylamine N-acetyltransferase TERM 4335 6488979 - 6488997 + g 74 -2.2 -4.82901 | opp_overlap 6488979 TGTCGAGATCGAAAT GGTCAGGC ATT GCCCCGCC TTTTTGTGACAGCCG BRADO6243 6489404 - 6489078 - | MarR family transcriptional regulator TERM 4336 6489460 - 6489444 - H 78 -5.1 -4.7254 | opp_overlap 6489444 6489445, overlap 6489445 6489453 ATTCGCTATGAAAAA TGTAGCA TAT TGCTACG TTTAATGTAGCAAAG BRADO6244 6489494 - 6490048 + | putative carboxymuconolactone decarboxylase family protein kpsF 6491055 - 6490054 - | arabinose 5-phosphate isomerase BRADO6246 6491242 - 6492948 + | hypothetical protein TERM 4337 6492991 - 6493025 + T 71 -13 -3.06796 | gap 1, opp_overlap 6492995, overlap 6492995 GAGCGCAGCGACGAC GCAATCCAGGGGCTG CGCACT CGG-CCCTGGATTGC TTCGCTGCGCTCGCA BRADO6247 6493535 - 6493089 - | hypothetical protein TERM 4338 6493458 - 6493446 - G 72 -6.9 -4.28188 | overlap 6493448 6493449 GAGCCAGAACAGAAA CACGC CCG GCGCG AGCAGCTCCATCGCC BRADO6248 6494556 - 6493552 - | hypothetical protein TERM 4339 6494597 - 6494631 + r 76 -8 -4.37886 | gap 1, opp_overlap 6494610, overlap 6494599 GCCTCCTCACCGACC TC-TGCAGCAATCAC AATCTA GGGATTGCTGCATGA TTTTGTCGGGGGTCC hemH 6495842 - 6494745 - | ferrochelatase BRADO6250 6495938 - 6496345 + | hypothetical protein shc 6496555 - 6498609 + | squalene-hopene cyclase BRADO6253 6499643 - 6498966 - | putative Short-chain dehydrogenase/reductase family protein TERM 4340 6499273 - 6499238 - G 75 -13.2 -3.4252 | CGCCAGTCAGCAGAA TGGTGCCGCGCTTGCG CGCG CGCATGCCCGGCAACA CCGCCTGCACGGCGG BRADO6254 6500130 - 6499669 - | hypothetical protein BRADO6255 6500218 - 6501159 + | LysR family transcriptional regulator BRADO6256 6502742 - 6501534 - | putative high affinity nickel transporter TERM 4341 6501636 - 6501681 + g 72 -14.6 -2.70932 | gap 1, overlap 6501638 CAGTCCCCGCATGAT CAGCGCGCCGCCGCCGTCGCG GCCGG CGCTGAGGCGGCGG-GCGATG TCCTTGGCGGCCACC TERM 4342 6502702 - 6502682 - G 100 -18.3 -4.52589 | CGTCGGCAGACAAAA GCGCCGCGA GGA TCGCGGCGC AAATCAGAAACGGTC BRADO6257 6503368 - 6502739 - | putative signal peptide dcp 6505460 - 6503379 - | peptidyl-dipeptidase BRADO6259 6505586 - 6505846 + | hypothetical protein BRADO6260 6506523 - 6507665 + | putative ornithine decarboxylase TERM 4343 6508433 - 6508392 - g 75 -7.2 -4.4078 | overlap 6508393 6508409 TCTGCCGAACGAAAA GCCCGCCGCCGCAAGG-AGC GGCC GCTGCCATGCG-CGGCGTGA GGCCCGAGGCGGCGG BRADO6261 6507843 - 6508433 + | putative acetyltransferase (GNAT) family protein BRADO6262 6508430 - 6508582 + | hypothetical protein BRADO6263 6508679 - 6509068 + | hypothetical protein TERM 4344 6510220 - 6510192 - g 77 -13.9 -3.47078 | opp_overlap 6510206 CATCCTAGATGAGAA CGAGATCGTCGAC GGC ATCGACGAGCTCG GCGTGCTGCTCTACG hss 6509137 - 6510561 + | homospermidine synthase BRADO6265 6511209 - 6510901 - | putative signal peptide BRADO6266 6512375 - 6511356 - | hypothetical protein BRADO6267 6513421 - 6512375 - | putative cobalamin synthesis protein/P47K family protein TERM 4345 6513502 - 6513459 - R 86 -11.7 -4.14013 | opp_overlap 6513459 6513499 GAAAATGGCTCAAAA GCGCTGC-GGCCCGCGAGGGC CAAA ACCCTAACGGACCAGC-GCGC TCTTCAGGGCCCTTA BRADO6268 6514355 - 6513486 - | ABC transporter substrate-binding protein TERM 4346 6513667 - 6513680 + g 95 -9.5 -5.0538 | opp_overlap 6513665 TTCTCCAGGAAGACG GCCGG AATC CCGGC TTTTTTCACCTGGCG BRADO6269 6515236 - 6514364 - | ABC transporter permease BRADO6270 6515991 - 6515233 - | putative ABC transporter ATP-binding protein crcB 6516906 - 6516502 - | camphor resistance protein CrcB TERM 4347 6517048 - 6517073 + r 88 -17.5 -3.06183 | opp_overlap 6517048 GGCGACAAAGAAAAA GGGCGGCGAGC CCGA GCCCGCCGCCC TTCCCTGACGATCAC TERM 4348 6517073 - 6517048 - R 100 -19.7 -5.38054 | opp_overlap 6517048 GGCGACAAAGAAAAA GGGCGGCGAGC CCGA GCCCGCCGCCC TTCCCTGACGATCAC sodB 6517694 - 6517095 - | superoxide dismutase, iron/manganese cofactor TERM 4349 6518027 - 6518043 + G 75 -9.3 -4.07568 | opp_overlap 6518018 GCAGAACGTCAACAT CGCCGGC ATC GGCGGCG TTTTGACGCGCGCCG TERM 4350 6518157 - 6518189 + G 80 -9.7 -4.2528 | CTGCTGTTCTGCGCA GCCGATCGCGTCG CCTTCTA CGGCGCGCGCGGC TTTATTCCGTTCGAC BRADO6274 6517800 - 6518333 + | putative acetyltransferase (GNAT) family protein TERM 4351 6518400 - 6518410 + F 76 -8.2 -4.18197 | TGTTCGAGGCACACT GGCC GTT GGCC TTTTGCCTCACACAT BRADO6277 6519343 - 6519777 + | hypothetical protein BRADO6278 6520934 - 6519786 - | hypothetical protein TERM 4352 6521183 - 6521227 + G 81 -7.9 -4.65895 | gap 3 GCCAGGTTCTGTCGG CCACCCCGCTCGCC-GTC-CGC ATCG GCGAGACCGGC-ATCGCGGTGG TTTTTCGCTACGGCG BRADO6279 6521083 - 6521886 + | hypothetical protein BRADO6280 6522101 - 6522832 + | hypothetical protein BRADO6281 6523565 - 6522849 - | putative MgtC-magnesium transport family protein TERM 4353 6523244 - 6523270 + g 70 -12.9 -3.01712 | CACAGGCGCCGACGG CCGCGGAGGCC CACAA GGTCGCCGCGG TGTTGAGGCCCCGGA TERM 4354 6523422 - 6523404 - G 73 -13.8 -3.2056 | ACCGATATCGACGAA GGCGGCGG CGC CCACCGCC ACCAGGACGTTGGTG BRADO6282 6523721 - 6524128 + | hypothetical protein BRADO6283 6524806 - 6524210 - | putative cytochrome c family protein BRADO6284 6525501 - 6524863 - | putative cytochrome c family protein BRADO6285 6526356 - 6525553 - | hypothetical protein BRADO6286 6527982 - 6526387 - | putative cytochrome c family protein BRADO6287 6528174 - 6528815 + | putative cytochrome c family protein BRADO6288 6529525 - 6528866 - | CRP/FNR family transcriptional regulator BRADO6289 6531934 - 6529640 - | putative cation-transporting ATPase BRADO6290 6532757 - 6532026 - | putative 3-oxoacyl-[acyl-carrier-protein] reductase (3-ketoacyl-acyl carrier protein reductase) BRADO6291 6534138 - 6532750 - | putative 2-succinylbenzoate--CoA ligase (OSB-CoA synthetase) (o-succinylbenzoyl-CoA synthetase) BRADO6292 6534370 - 6534125 - | hypothetical protein BRADO6293 6536299 - 6534497 - | acyl-CoA synthetase TERM 4355 6535335 - 6535307 - G 78 -14 -3.59979 | gap 1 CTGCGGGATCGCAAA GCG-CGTCTGGAA CGCC TTCCAGACGTCGC CGCGCAGGCCATTGC TERM 4356 6535553 - 6535504 - G 73 -12.7 -3.35798 | gap 1 ACTTCTCAGCCAGAA CCGCGGTTCCGCCGGCGCGCAGCA TGC TGCAGGGCG-CGACGATACCGCCG ACGGAATGATAGACC BRADO6295 6536477 - 6537466 + | hypothetical protein htpG 6539359 - 6537491 - | heat shock protein 90 TERM 4357 6539297 - 6539264 - G 71 -3 -4.58283 | overlap 6539267 6539284 CAATTCGCGTAAAAA GATGTCGGTCTCGG AGTAGA CCGAGTGCACCATC AGGTGCAGCAACTCG BRADO6297 6540134 - 6539640 - | MarR family transcriptional regulator BRADO6298 6540265 - 6540807 + | glyoxalase/bleomycin resistance protein BRADO6299 6540847 - 6542484 + | hypothetical protein BRADO6300 6542481 - 6542675 + | hypothetical protein TERM 4358 6542745 - 6542691 - f 100 -24.5 -3.80733 | gap 2, opp_overlap 6542692, overlap 6542692 6542695 CGCAGGCGACAACAA GGCAC-CC-CGCCCCCTGTCCCCGT GTGAAGA ACGGGGACAGGGGGCGCGGCGTGCT TGTGGCGCGAACGCG TERM 4359 6542692 - 6542744 + F 100 -28 -3.28712 | gap 2, opp_overlap 6542691 6542692 6542695 GCAGGCGACAACAAG GCAC-CC-CGCCCCCTGTCCCCGT GTGAAGA ACGGGGACAGGGGGCGCGGCGTGC TTGTGGCGCGAACGC TERM 4360 6542744 - 6542692 - f 100 -28 -2.88118 | gap 2, opp_overlap 6542692, overlap 6542691 6542695 GCAGGCGACAACAAG GCAC-CC-CGCCCCCTGTCCCCGT GTGAAGA ACGGGGACAGGGGGCGCGGCGTGC TTGTGGCGCGAACGC TERM 4361 6542739 - 6542695 - f 100 -28.7 -2.68806 | opp_overlap 6542692, overlap 6542692 6542691 GGCGACAACAAGGCA CCCCGCCCCCTGTCCCCGT GTGAAGA ACGGGGACAGGGGGCGCGG CGTGCTTGTGGCGCG BRADO6302 6543022 - 6543675 + | hypothetical protein BRADO6303 6543804 - 6544214 + | hypothetical protein TERM 4362 6544230 - 6544260 + T 76 -13.9 -3.21747 | overlap 6544252 GACCCTCGACCAGGA CGGCGACGGCGCC CTATC GGCGCTGCCGTCG TTCGTCATCGCGTGA BRADO6304 6548043 - 6544870 - | multidrug ABC transporter TERM 4363 6546352 - 6546331 - G 73 -13.7 -3.14344 | opp_overlap 6546342, overlap 6546345 GAGGTCGGGCAGGAA GGTGCCGCC GAAC AGCGGCACC AGCGCGGCGCCGCCG TERM 4364 6546483 - 6546455 - G 86 -18.1 -3.16881 | TACCGACGCGACCAA CGCACCAGCGGCG GCT CGCGGCTGGCGCG CGGCTTGCGGCCGGC TERM 4365 6547344 - 6547387 + g 73 -14.4 -3.14132 | gap 1, opp_overlap 6547339 TGTCGACGAAGCCGG CGCCGCGCACGCCGGTGGCCT TGC GGGCCGCCG-CGAGCACGTCG TTCATGCCGAGCCCG BRADO6305 6549052 - 6548036 - | putative multidrug resistant protein TERM 4366 6550671 - 6550703 + G 77 -13.5 -3.53012 | opp_overlap 6550667, overlap 6550671 GATCGAGATCATCGA C-CGGCCGGACGCCG AGATC CGG-GTCCGGCCGCG TTTCGCCGGCGCGAC BRADO6306 6549823 - 6555039 + | hypothetical protein BRADO6307 6555072 - 6556529 + | hypothetical protein BRADO6308 6556539 - 6557150 + | hypothetical protein BRADO6309 6558135 - 6558419 + | putative signal peptide BRADO6310 6558463 - 6559233 + | putative cytochrome b561 family protein BRADO6311 6559922 - 6560263 + | hypothetical protein BRADO6312 6560349 - 6562214 + | hypothetical protein TERM 4367 6562368 - 6562333 - T 70 -10.4 -3.64703 | gap 1, opp_overlap 6562345 6562347 GTTTTCGGACCGAAA CGTCACCGCAGACTGGA TCT TCC-GCCTGCGCGGACG ATGCCGTTCCTTCGT TERM 4368 6562440 - 6562413 - T 100 -17 -4.2349 | opp_overlap 6562411 CGCGCAGACGCAAAA GCAGCGTCGGCG AATT CGCTGACGCTGC CATGTCTGCCGAGGT BRADO6313 6563263 - 6562475 - | putative energy transducer TonB exbD 6563739 - 6563290 - | biopolymer transport exbD protein exbB 6564723 - 6563746 - | biopolymer transport protein BRADO6316 6566120 - 6565431 - | putative hydroxylase TERM 4369 6566058 - 6566087 + g 79 -12.9 -3.73775 | overlap 6566060 6566061 CCAATCGCTTTCGGC CATGATGTGGCGG AACT CCGCCACATCGTC TTTGCTCAGGATACC TERM 4370 6566060 - 6566085 + g 82 -15.5 -3.45324 | overlap 6566058 6566061 AATCGCTTTCGGCCA TGATGTGGCGG AACT CCGCCACATCG TCTTTGCTCAGGATA TERM 4371 6566061 - 6566084 + g 80 -16.8 -2.66873 | overlap 6566060 6566058 ATCGCTTTCGGCCAT GATGTGGCGG AACT CCGCCACATC GTCTTTGCTCAGGAT BRADO6317 6568713 - 6566173 - | putative TonB-dependent receptor protein BRADO6318 6571507 - 6569114 - | putative TonB-dependent receptor protein TERM 4372 6569308 - 6569273 - G 73 -14 -3.14132 | opp_overlap 6569293, overlap 6569282 CTGCTTCTCGATGAA GGCATCGAACCGCCAA TAGC TCGGCAGCTCGTTGCC GGTATTGGCCGCGAA atzD 6572835 - 6571723 - | cyanuric acid amidohydrolase TERM 4373 6573327 - 6573359 + G 71 -14.1 -2.91383 | overlap 6573329 TATGGCGCGGTGGCC GATTGGAGCGCGGCC TTC GGCGACGCTCCGATC TATCTGCATGGCGAT TERM 4374 6573620 - 6573662 + G 90 -18.5 -3.07443 | gap 2, overlap 6573613 CATCCCGCTCGGCTC CGCC-GCGGTGCGCCG-CATC GCC GATGTCGTCGCGCCGCTGGCG TTCGATCGCATCTAC BRADO6320 6572961 - 6573764 + | putative hydrolase TERM 4375 6574289 - 6574307 + G 82 -17.4 -2.83747 | opp_overlap 6574284, overlap 6574287 TGCGATGCAATGGCT GCGGCCCG CCG CGGGCCGC TCGTTCTGCGAGTTC BRADO6322 6574086 - 6574574 + | hypothetical protein BRADO6323 6574724 - 6575206 + | hypothetical protein TERM 4376 6575372 - 6575356 - f 75 -12.3 -3.54459 | opp_overlap 6575365 6575366 TGAATTCTCGTTAAA GCGGCAA CGT TTGCCGC GACGGCACGTTTGAT BRADO6324 6575438 - 6577213 + | pyruvate decarboxylase TERM 4377 6577752 - 6577806 + G 100 -20.1 -3.01712 | overlap 6577751 6577753 GCATCGAGTCGAGGT GGCGCGGCTGGCGATCGGCGAGC-GCG CCG CGCTGTTCGTCGAT-GCCAACGGCGCC TATTCGCCCAAGCAG TERM 4378 6578298 - 6578280 - g 73 -13.8 -3.12351 | TGGCCTGACATTCAA GCACGCCG ATG CGGCGCGC TACGCCGTGAGTGCG BRADO6325 6577213 - 6578319 + | putative mandelate racemase/muconate lactonizing family protein TERM 4379 6578642 - 6578605 - g 71 -12.5 -3.29144 | TGACGCTGGCGATAA GCGCGCACGGCACCGCC GACA GGCGGCCCTGGGCGCAC CGGCTGCGCGACGGC BRADO6326 6578316 - 6579281 + | hypothetical protein BRADO6327 6579274 - 6579939 + | hypothetical protein BRADO6328 6579929 - 6581626 + | oxidoreductase NAD(P)-binding subunit BRADO6329 6582297 - 6584009 + | hypothetical protein TERM 4380 6584055 - 6584025 - f 91 -20.4 -2.71364 | opp_overlap 6584028 CCAGCGCCGCAACCA GGACCCGGACGGCG CCG CGCCGCCCGGGTCT TCGCCGCGCGCTGGC TERM 4381 6584028 - 6584052 + F 90 -18.5 -3.01791 | opp_overlap 6584025 GCGCCGCAACCAGGA CCCGGACGGCG CCG CGCCGCCCGGG TCTTCGCCGCGCGCT TERM 4382 6584411 - 6584465 + G 81 -14.9 -3.61715 | opp_overlap 6584440, overlap 6584447 6584447 CGTCTGGACCCGGCA GCTAGCGCTCGCGCTGGGCACGG AGATGATGG CGGTGCTCGGCGCGATCGCCGGC TTCTTCGCCGGCCTC TERM 4383 6585417 - 6585447 + G 72 -14.7 -2.71731 | opp_overlap 6585406 AACAGCGTGGGCGCG GCGATTGCGCCGC TCGTC GCGGCGCAACTGC TCATTCCGACATGCG BRADO6330 6584238 - 6586853 + | putative spermine/spermidine synthase family protein BRADO6331 6587537 - 6586860 - | hypothetical protein BRADO6332 6587889 - 6587560 - | hypothetical protein TERM 4384 6587946 - 6587923 - R 93 -18.2 -3.28497 | overlap 6587918 CTATTCCAAAGTCAA GGCGCCGGTT CGCG AACCGGCGCC AATCACGATTAGCAG TERM 4385 6587963 - 6587986 + r 78 -15.3 -2.72463 | opp_overlap 6587963 ATCACGATTAGCAGA TCCGGCGGG GCGACG CCCGCCGGA TCGTTGCGGATCAAT TERM 4386 6587986 - 6587963 - R 79 -15.3 -2.83894 | opp_overlap 6587963 ATCACGATTAGCAGA TCCGGCGGG GCGACG CCCGCCGGA TCGTTGCGGATCAAT BRADO6333 6590022 - 6588001 - | hypothetical protein BRADO6334 6590282 - 6591193 + | putative signal peptide BRADO6335 6591190 - 6592170 + | hypothetical protein BRADO6336 6592188 - 6592799 + | putative [NiFe]-hydrogenase/urease accessory HupE/UreJ family protein BRADO6337 6592796 - 6593416 + | hypothetical protein BRADO6338 6593419 - 6593952 + | putative Type II secretory pathway, prepilin signal peptidase BRADO6339 6594594 - 6593968 - | putative general secretion pathway protein N, GspN BRADO6340 6595148 - 6594591 - | putative general secretion pathway protein M, GspM BRADO6341 6596221 - 6595145 - | putative general secretion pathway protein L, GspL BRADO6342 6597162 - 6596218 - | putative general secretion pathway protein K, GspK TERM 4387 6597182 - 6597219 + r 70 -11.9 -3.14132 | gap 1 CGATCGGCTCGATCT TGG-GCGCTTGCTTCGGC TCG GCCGTAGCCGGCGCGCCG TTCGTAGCAGCGGCA BRADO6343 6597881 - 6597162 - | putative general secretion pathway protein J, GspJ BRADO6344 6598285 - 6597878 - | putative general secretion pathway protein I, GspI BRADO6345 6598751 - 6598290 - | putative general secretion pathway protein H, GspH gspG 6599220 - 6598744 - | general secretion pathway protein G gspF 6600449 - 6599241 - | general secretion pathway protein F TERM 4388 6599864 - 6599823 - G 81 -12.1 -3.78034 | TAGCGACATGAAGAA GCCCAGCGCGGTGTCGGCG CGGC CGCCGAAATCGCGCAGCAC GGCGGAGAAATTCGG gspE 6602110 - 6600458 - | general secretion pathway protein E (Type II traffic warden ATPase) TERM 4389 6601511 - 6601462 - G 85 -17.7 -2.62616 | gap 1 TGATGCGCGAGATTA CGGCCTGCGGCAGCACGCCCGCCG GCG CCGCGATCGGGC-GCAGCAGGCCG TCGACGCGCAGTCTG gspD 6602362 - 6604668 + | general secretion pathway protein D BRADO6350 6604754 - 6605185 + | Sel1 repeat-containing protein TERM 4390 6605723 - 6605704 - g 70 -10 -3.65046 | gap 1 TCCGCATTTCAAGAA GGCCGA-GC AGC GCATCGGCC GTGACGAGGTGCGCT TERM 4391 6606109 - 6606121 + G 89 -10.5 -4.57073 | overlap 6606106 CGGCAAGGCCCAGCC CGGCG ACG CGCCG TTTTTCAAGAAGCTG BRADO6351 6605447 - 6607312 + | putative phosphoesterase familiy protein; putative signal peptide TERM 4392 6607352 - 6607383 + F 91 -17.3 -3.33696 | opp_overlap 6607354, overlap 6607354 ACGGTACGAGCAGGA CAGGCCCGCCGCA CTCTGT TGCGGCGGGCCTC TTACTTCGGGACCGG TERM 4393 6607381 - 6607354 - f 93 -19.9 -2.83715 | opp_overlap 6607352 6607354 GGTACGAGCAGGACA GGCCCGCCGCA CTCTGT TGCGGCGGGCC TCTTACTTCGGGACC TERM 4394 6607354 - 6607381 + F 95 -19.9 -3.23853 | opp_overlap 6607354, overlap 6607352 GGTACGAGCAGGACA GGCCCGCCGCA CTCTGT TGCGGCGGGCC TCTTACTTCGGGACC TERM 4395 6607494 - 6607513 + F 71 -13.6 -2.57132 | overlap 6607461 6607493 CCGCATCGTTGCACG GCCGCTTG GATG CAAGCGGC GTTGTGCAAACGGGA TERM 4396 6608339 - 6608378 + G 83 -14.3 -3.86015 | gap 1, opp_overlap 6608338 GCGCGATCCCAAGAC GCTTGCGGAGACCGACGG ACAGC CCGACGG-CTTCGCGAGC TTTCTCACCGCGCTG BRADO6352 6607614 - 6608666 + | hypothetical protein BRADO6353 6610314 - 6608719 - | putative pyruvate, phosphate dikinase BRADO6354 6612236 - 6610311 - | hypothetical protein BRADO6355 6613257 - 6612958 - | hypothetical protein TERM 4397 6613234 - 6613244 + g 74 -5.4 -4.56607 | AGCGGACCTATTATG CTCA CCG TGAG TTTTGTCATTCATGA TERM 4398 6613291 - 6613310 + H 78 -5 -4.81212 | gap 1, overlap 6613291 6613293 6613294 CGCCTTGCGGATGCT G-ATGGCGT CAT ACGCCGTGC TTTTGTTGTGCTACA BRADO6356 6613361 - 6614977 + | putative FAD-dependent dehydrogenase BRADO6357 6616460 - 6615102 - | carbohydrate porin, OprB family BRADO6358 6617478 - 6616471 - | putative divalent cation transporter, CorA-like BRADO6359 6619109 - 6617481 - | inorganic phosphate transporter TERM 4399 6620317 - 6620276 - g 82 -15.7 -3.38768 | opp_overlap 6620288 CGACATCATCCAGAA CGCGATCGATCTCGCCCGC GCCT GCGGGCTCGACCGGCCGCG CGTCGGCGTGCTCTC TERM 4400 6620410 - 6620395 - g 78 -10.4 -4.07568 | CGGTGCTGTCCAAAA TGGCCG AGCG CGGCCA GATCAAGGGCGGCAT BRADO6360 6619332 - 6620753 + | bifunctional enoyl-CoA hydratase/phosphate acetyltransferase ackA 6620757 - 6621980 + | acetate kinase BRADO6362 6621996 - 6624350 + | hypothetical protein fabI 6624363 - 6625184 + | enoyl-[acyl-carrier-protein] reductase (NADH) TERM 4401 6625214 - 6625189 - f 79 -11.1 -3.86524 | gap 1 ACATGGCGTGAGAAA GTCGCTCGGACG GAA CG-CCGCGCGAC CGTCTCCAACCGATC BRADO6364 6625333 - 6626799 + | putative Beta-lactamase TERM 4402 6626847 - 6626816 - f 86 -16 -3.14132 | opp_overlap 6626821, overlap 6626821 TCGCCGCGTCACCAA CCAAACCAGAACGC GCAG GCATTCCGGTTTGG ATCTCCGGAGCGATC TERM 4403 6626842 - 6626821 - f 71 -8.7 -3.95584 | opp_overlap 6626821, overlap 6626816 GCGTCACCAACCAAA CCAGAACGC GCAG GCATTCCGG TTTGGATCTCCGGAG BRADO6365 6626893 - 6627168 + | hypothetical protein BRADO6366 6627233 - 6628513 + | putative acyltransferase BRADO6367 6630276 - 6628744 - | hypothetical protein TERM 4404 6630057 - 6630045 - G 88 -10.5 -4.41353 | opp_overlap 6630045 6630044, overlap 6630037 GCACATAGACCAAAA CCGCC ATC GGCGG GTTGGTCTCCAGTAT BRADO6368 6631044 - 6632156 + | phosphatase TERM 4405 6632604 - 6632566 - f 100 -21.8 -3.63837 | opp_overlap 6632560, overlap 6632572 ACAAGGGGGCAAGAA CCAAAACTCCCACAGCCG AGG CGGCTGCGGGAGTGTCGG TCTCAGTGGTTGCGG TERM 4406 6632598 - 6632572 - f 100 -20.2 -4.56133 | opp_overlap 6632560, overlap 6632566 GGGCAAGAACCAAAA CTCCCACAGCCG AGG CGGCTGCGGGAG TGTCGGTCTCAGTGG BRADO6371 6632920 - 6633243 + | hypothetical protein TERM 4407 6633491 - 6633507 + G 81 -5.1 -4.72272 | overlap 6633493 TACCTGTCCATATTC TCGAAGC GTC GCTTCCA TTTTTCGTACAGCGC BRADO6372 6633331 - 6633741 + | hypothetical protein BRADO6373 6633769 - 6635385 + | putative VirD4/TraG family protein TERM 4408 6636209 - 6636237 + G 89 -16.8 -3.53563 | opp_overlap 6636199, overlap 6636210 ATGAACTCGGCCACA TTGCATCCGGCG ACATG CGCCGGATGCAG TTTGCGGAAGGCTAT TERM 4409 6636210 - 6636236 + G 85 -18.1 -2.71924 | opp_overlap 6636199, overlap 6636209 TGAACTCGGCCACAT TGCATCCGGCG ACATG CGCCGGATGCA GTTTGCGGAAGGCTA BRADO6374 6635395 - 6636672 + | putative protease (heat shock protein) BRADO6376 6636970 - 6637287 + | hypothetical protein TERM 4410 6637319 - 6637283 - T 77 -12.9 -3.56092 | opp_overlap 6637285 6637286, overlap 6637285 6637286 6637288 CTACCATCGTCGAAA CATGACGGATGCCCCGC TTT GCGGGGCACTCGTCGTT TCTATGGCCTGAAAA TERM 4411 6637285 - 6637317 + T 100 -17.7 -4.05033 | opp_overlap 6637283 6637285 6637286 6637288, overlap 6637286 ACCATCGTCGAAACA TGACGGATGCCCCGC TTT GCGGGGCACTCGTCG TTTCTATGGCCTGAA TERM 4412 6637317 - 6637285 - T 84 -15.5 -3.35775 | opp_overlap 6637285 6637286, overlap 6637283 6637286 6637288 ACCATCGTCGAAACA TGACGGATGCCCCGC TTT GCGGGGCACTCGTCG TTTCTATGGCCTGAA TERM 4413 6637286 - 6637316 + T 91 -19 -3.02698 | opp_overlap 6637285 6637283 6637286 6637288, overlap 6637285 CCATCGTCGAAACAT GACGGATGCCCCGC TTT GCGGGGCACTCGTC GTTTCTATGGCCTGA TERM 4414 6637316 - 6637286 - T 87 -19 -2.61144 | opp_overlap 6637286 6637285, overlap 6637285 6637283 6637288 CCATCGTCGAAACAT GACGGATGCCCCGC TTT GCGGGGCACTCGTC GTTTCTATGGCCTGA TERM 4415 6637314 - 6637288 - T 79 -15.8 -2.84504 | opp_overlap 6637286 6637285, overlap 6637286 6637285 6637283 ATCGTCGAAACATGA CGGATGCCCCGC TTT GCGGGGCACTCG TCGTTTCTATGGCCT BRADO6377 6637956 - 6637321 - | hypothetical protein BRADO6378 6638506 - 6638700 + | hypothetical protein BRADO6379 6638713 - 6639930 + | replication protein BRADO6380 6639964 - 6640335 + | hypothetical protein TERM 4416 6640345 - 6640372 + F 74 -11.9 -3.53722 | opp_overlap 6640345, overlap 6640346 AGCTAAGCGCATACA GCGGGTCGGGC AATGGC GCCCGGCCCGG TTCTCTCGATCTCAG TERM 4417 6640346 - 6640371 + F 78 -15.4 -2.71912 | opp_overlap 6640345, overlap 6640345 GCTAAGCGCATACAG CGGGTCGGGC AATGGC GCCCGGCCCG GTTCTCTCGATCTCA BRADO6381 6640357 - 6640623 + | hypothetical protein TERM 4418 6640651 - 6640630 - f 83 -15.1 -3.17075 | opp_overlap 6640625 GGGGCGTGAATGCAA GGCCGCGCA ATGC CGCGCGGCC TTGGCCTCATTGGCA BRADO6382 6640681 - 6640917 + | hypothetical protein BRADO6383 6640914 - 6642386 + | putative FtsK/SpoIIIE family protein TERM 4419 6642395 - 6642447 + T 93 -16.8 -3.767 | gap 1, overlap 6642396 TTTCTGACATCGTCG AGGGCGGAGG-TGAGCACGGCGCGC GCCA GCGCGCCGCGCGCAGCCGACGCCCC TTTCGTACATACCTA TERM 4420 6642396 - 6642446 + T 93 -20.3 -2.85699 | gap 1, overlap 6642395 TTCTGACATCGTCGA GGGCGGAGG-TGAGCACGGCGCGC GCCA GCGCGCCGCGCGCAGCCGACGCCC CTTTCGTACATACCT BRADO6384 6642948 - 6642472 - | hypothetical protein TERM 4421 6642988 - 6643032 + H 81 -12 -3.96298 | gap 1, opp_overlap 6642993, overlap 6642989 CTTCTTGGTTGGCCA ATGCAGCGACCGACCGGGCGC GCAA GCGCACGGGCGGA-GCTGCAA TTTCCTTGATACCTC TERM 4422 6642989 - 6643031 + H 81 -15.5 -2.97297 | gap 1, opp_overlap 6642993, overlap 6642988 TTCTTGGTTGGCCAA TGCAGCGACCGACCGGGCGC GCAA GCGCACGGGCGGA-GCTGCA ATTTCCTTGATACCT TERM 4423 6643133 - 6643152 + H 88 -8.6 -4.81685 | gap 1, overlap 6643127 CAACCGAAGTCGAGA GCCCCG-AT TGG ATGCGGGGC TTTTTCATCGTTAGT BRADO6385 6643345 - 6643869 + | ankyrin repeat-containing protein TERM 4424 6643889 - 6643912 + F 93 -16 -3.79251 | opp_overlap 6643886, overlap 6643892 TCCGCTCGAACACCT GGACGGCCCC TCGC GGGGCCGTTC TTTCGTCGTAAAATC TERM 4425 6643892 - 6643909 + F 90 -14.1 -4.0274 | opp_overlap 6643886, overlap 6643889 GCTCGAACACCTGGA CGGCCCC TCGC GGGGCCG TTCTTTCGTCGTAAA TERM 4426 6644915 - 6644931 + G 70 -11.5 -3.48276 | opp_overlap 6644914 6644915 ATTGCTTTGACAAAG GCCCGTC CTT GGCGGGC TTCTGTCCGCGAGAA BRADO6386 6644318 - 6644962 + | putative nitrilase/N-carbamoyl-D-aminoacid amidohydrolase family protein TERM 4427 6644966 - 6644954 - T 71 -4.7 -4.51812 | CGCGAGAACAAGAAA GGACC GTA GGACC AGTATCTGTCTTTCC BRADO6387 6645929 - 6645012 - | putative antirestriction protein TERM 4428 6646265 - 6646300 + H 74 -5.2 -4.57569 | overlap 6646272 GGGAATGCTCGATTA GGCGCTGGGCCTCGGT GAAG ATCGGGGCCTTTCGCA TTTTTCCGGCCGTGG TERM 4429 6646272 - 6646293 + H 74 -10.1 -3.8046 | overlap 6646265 CTCGATTAGGCGCTG GGCCTCGGT GAAG ATCGGGGCC TTTCGCATTTTTCCG TERM 4430 6646646 - 6646630 - g 73 -3.5 -4.65895 | overlap 6646631 6646632 TGTTCTACCTAAAAA CCCCCCC TAA GGGTTGG CAGCCGATACAGGAC TERM 4431 6647025 - 6647002 - g 73 -3.8 -4.66537 | TGGCCGAACAGAAAA TGCCGGTGAT CCTT ATCAATGGCA AGGATCGGAGCAATG BRADO6390 6646416 - 6647588 + | hypothetical protein BRADO6391 6647595 - 6648065 + | hypothetical protein BRADO6392 6648395 - 6648192 - | hypothetical protein BRADO6394 6650236 - 6649106 - | hypothetical protein TERM 4432 6652646 - 6652678 + G 75 -9.1 -4.07568 | overlap 6652647 ACCGGTCACGATTCT TTCTCGCCAACGC CGTCCAC GCGGTGGCGAGAC TTTTCGACCGACAAG TERM 4433 6652847 - 6652835 - g 72 -4.7 -4.57073 | GACCGCCGCCAAAAA GCGGC CGA GCAGC TAAAGCAAGTCGCTC BRADO6395 6650381 - 6654439 + | hypothetical protein BRADO6396 6654771 - 6654547 - | hypothetical protein tnpR 6655373 - 6654768 - | transposon Tn21 resolvase TERM 4434 6656003 - 6656028 + G 70 -4 -4.54727 | overlap 6656004 CATCTTTGGCCCAAT TTTGCCGC AGGAACGTTG GCGGCAAG TTTTAATTTACACGC BRADO6399 6655611 - 6656747 + | hypothetical protein TERM 4435 6657086 - 6657133 + T 77 -12.7 -3.53811 | gap 1, opp_overlap 6657113 AAGTCCCGTATGCCC GGCC-TGGCCGCCTCGCTAGGT ACATC AGCTGGCGAGCCGGCCACGGAC TTTCCCAACAGTCAA BRADO6401 6658384 - 6657485 - | hypothetical protein TERM 4436 6658759 - 6658790 + r 100 -16 -4.09685 | opp_overlap 6658763, overlap 6658763 AACCCGCCGCCGGCC GAAAGCCCCGCA ACCAGCCC TGCGGGGCTTTC TTTTGCGAGCTACAA TERM 4437 6658763 - 6658786 + r 95 -11 -4.65263 | opp_overlap 6658763, overlap 6658759 CGCCGCCGGCCGAAA GCCCCGCA ACCAGCCC TGCGGGGC TTTCTTTTGCGAGCT TERM 4438 6658786 - 6658763 - R 74 -11.7 -3.53012 | opp_overlap 6658763 6658759 CGCCGCCGGCCGAAA GCCCCGCAA CCAGCC CTGCGGGGC TTTCTTTTGCGAGCT BRADO6402 6660702 - 6658810 - | hypothetical protein TERM 4439 6661163 - 6661142 - R 95 -10.1 -4.52857 | overlap 6661143 ACGCCCGACATAAAA CGGCTCTCC CGAA GGAGAGCCT GGCACGTCGCGAGTA TERM 4440 6661162 - 6661143 - R 77 -13.6 -3.31232 | overlap 6661142 CGCCCGACATAAAAC GGCTCTCC CGAA GGAGAGCC TGGCACGTCGCGAGT BRADO6403 6661394 - 6661194 - | hypothetical protein TERM 4441 6662150 - 6662116 - H 100 -21.5 -3.50492 | GATTACAGACTAGAA CGCGACAACGCGGCG TCGCT CGCCGCGTTGCCACG ACCTCTCCGCCATGT TERM 4442 6662276 - 6662255 - g 70 -10.9 -3.62096 | gap 1 GCCTACGATCTCAAA CG-CATCGCC CTG GGCGATGGCG AAGGGTCGTACCTGA TERM 4443 6662982 - 6662934 - g 72 -14.6 -2.78463 | gap 1, opp_overlap 6662934, overlap 6662936 AGTGGCGCTATGAGA CACTCACCGGCCGCCCCTGCC CTGCATCC GGC-GGGGCGACCTATGAGCG TTTGAGCCGTACCGA BRADO6404 6662228 - 6663148 + | DNA breaking-rejoining protein BRADO6405 6663141 - 6663425 + | hypothetical protein BRADO6406 6663831 - 6663478 - | hypothetical protein BRADO6407 6664465 - 6663803 - | putative partition protein (ParA) BRADO6409 6664797 - 6666068 + | putative replication protein TERM 4444 6666095 - 6666079 - f 74 -9.5 -3.87815 | opp_overlap 6666079 GCTGATTTTGACAAA CGGTTTT GAC AAAACCG TATATCACCTATCCG BRADO6410 6666186 - 6666317 + | hypothetical protein TERM 4445 6666395 - 6666406 + T 77 -2.2 -5.08731 | gap 1, opp_overlap 6666395, overlap 6666390 GAATACCTCTTAAAA C-GCC TTC GGCTG TTTTCTTCTTTCTTC TERM 4446 6666714 - 6666698 - T 74 -9.5 -3.86897 | opp_overlap 6666698, overlap 6666684 CCCATTTTTGACAAA CGGTTTT GAC AAAACCG TATATCACCTATCGA BRADO6412 6667545 - 6667390 - | cation-transporting ATPase pacL (partial) BRADO6413 6668283 - 6667591 - | hypothetical protein TERM 4447 6668326 - 6668351 + H 70 -7.6 -4.03413 | opp_overlap 6668313 AGCGACGGCACTCAT CGGAGACC CCTCAGAAAA GGTCTCCG TTTCTATGCAAAACT BRADO6414 6668551 - 6669114 + | putative DNA-invertase from bacteriophage BRADO6415 6669174 - 6669410 + | hypothetical protein TERM 4448 6669623 - 6669604 - f 83 -12.8 -3.85909 | opp_overlap 6669604 GCACCCAAAGCGAAA GGGGCCGC ACGA ACGGCCCC TTTTTGCTAACGCCA TERM 4449 6669604 - 6669623 + F 100 -12.1 -4.72272 | opp_overlap 6669604 GCACCCAAAGCGAAA GGGGCCG CACGAA CGGCCCC TTTTTGCTAACGCCA TERM 4450 6670679 - 6670707 + G 70 -10.1 -3.7108 | AAGCGGGCGTTGTTC GCGACGGCCGCCA CAA TGGCGGGCGCAGC TTTGGGTATCGGGCT TERM 4451 6670812 - 6670832 + G 73 -11.1 -3.64703 | CCTCAACGCCTATTC GCCGCGG GACATCG CCGCGGC TTTGAATAAGAAGCG BRADO6418 6670258 - 6671868 + | putative recombinase BRADO6419 6672398 - 6673831 + | putative NAD-dependent aldehyde dehydrogenase; coniferyl aldehyde dehydrogenase (CALDH) TERM 4452 6674238 - 6674209 - g 86 -17.9 -3.05816 | gap 1 GCAGCCGGGACTCAA CGGCCGCATCGGCT ATC AGCCG-CGCGGCCG CGGCCTCGGCGGCTC TERM 4453 6674591 - 6674563 - g 70 -11.6 -3.4252 | overlap 6674564 GGTCACCCAGCAGAA TGGCGAGCGCTG GAGCG CAGCGCGCGCCT ACATCCAGCCGCATC TERM 4454 6674590 - 6674564 - g 71 -15.1 -2.65298 | overlap 6674563 GTCACCCAGCAGAAT GGCGAGCGCTG GAGCG CAGCGCGCGCC TACATCCAGCCGCAT BRADO6420 6673991 - 6675595 + | glucose-methanol-choline oxidoreductase family protein BRADO6421 6675884 - 6675642 - | hypothetical protein BRADO6422 6676835 - 6676074 - | putative short-chain dehydrogenase/reductase protein; putative 3-oxoacyl-[acyl-carrier-protein] reductase (3-ketoacyl-acyl carrier protein reductase) TERM 4455 6677123 - 6677156 + G 81 -11.7 -3.99324 | overlap 6677123 CGTGCATGGCGCGCC GCTGGCGCAGAACTG GCTG CAGTTCTTCGCCGCC TTTCTGGTCATCGGC BRADO6423 6676947 - 6677462 + | hypothetical protein BRADO6424 6677628 - 6678410 + | putative short-chain reductase/dehydrogenase; putative 3-oxoacyl-[acyl-carrier-protein] reductase (3-ketoacyl-acyl carrier protein reductase) TERM 4456 6678659 - 6678643 - T 70 -7.9 -4.07568 | TCCGTTGCGGGAAAA GCTTGCC TCC GGCGAGC GAGCTGACGTGTCGT BRADO6425 6679174 - 6678719 - | hypothetical protein BRADO6426 6679304 - 6680155 + | putative metallo-beta-lactamase superfamily protein BRADO6427 6680234 - 6681076 + | 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase TERM 4457 6681159 - 6681117 - f 78 -14.2 -3.06183 | opp_overlap 6681112 6681118 6681122 6681126, overlap 6681122 6681126 GTCATTGCGAGCGAA GCGAAGCAATCCAGAGCAAC CTC GGGACTCTGGATTGCTTCGT CGCTTCGCTCCTCGC TERM 4458 6681118 - 6681158 + F 77 -15.7 -2.55544 | opp_overlap 6681117 6681122 6681126, overlap 6681112 6681122 6681126 TCATTGCGAGCGAAG CGAAGCAATCCAGAG CAACCTCGGGA CTCTGGATTGCTTCG TCGCTTCGCTCCTCG TERM 4459 6681699 - 6681720 + G 73 -9.5 -3.92659 | gap 1 TGTCGATCGGCCTCG TCTGCGT-GC TCG GCTACGCAGA TTTCCGTTTTGCCGA BRADO6428 6681218 - 6681832 + | putative glutathione S-transferase BRADO6429 6681848 - 6682717 + | putative metallo-beta-lactamase superfamily protein TERM 4460 6682719 - 6682770 + T 74 -11.7 -3.53012 | gap 2, overlap 6682720 GCGCGGCGGTCTGAC TTTAACGCC--ACTGGATGCCCCGC GAAG GCGGGGCATCCAGTACGCCGTGAAC TTTCCGCAGAAAACG TERM 4461 6682720 - 6682769 + T 78 -15.2 -2.71712 | gap 2, overlap 6682719 CGCGGCGGTCTGACT TTAACGCC--ACTGGATGCCCCGC GAAG GCGGGGCATCCAGTACGCCGTGAA CTTTCCGCAGAAAAC ogt 6683444 - 6682857 - | putative methylated-DNA-protein-cystein methyltransferase (6-O-methylguanine-DNA methyltransferase) BRADO6431 6683588 - 6684844 + | glutamate carboxypeptidase BRADO6432 6684912 - 6685712 + | putative ectoine hydroxylase (ectD) BRADO6433 6685876 - 6687198 + | hypothetical protein TERM 4462 6687257 - 6687237 - T 100 -18.3 -5.252 | opp_overlap 6687237 GAGCCGCATAAAAAA GCCCCGACC GCT GGTCGGGGC TTGGTGGCCTGTAGG TERM 4463 6687237 - 6687257 + T 91 -18.3 -3.17763 | opp_overlap 6687237 GAGCCGCATAAAAAA GCCCCGACC GCT GGTCGGGGC TTGGTGGCCTGTAGG BRADO6434 6688105 - 6687512 - | hypothetical protein BRADO6435 6688306 - 6688671 + | putative transposase from insertion sequence BRADO6436 6688668 - 6689018 + | putative IS66 Orf2 like BRADO6437 6689060 - 6690685 + | IS66 family transposase TERM 4464 6690834 - 6690797 - f 100 -25.7 -3.87994 | opp_overlap 6690803 AGTCAGCGCCATAAA CGACGACGCCGCGCTGA GGGA TCAGCGCGGCGTTGTCG GGTATCGGATGTGAA TERM 4465 6690803 - 6690828 + F 95 -20.5 -3.34962 | opp_overlap 6690797 CGCCATAAACGACGA CGCCGCGCTGA GGGA TCAGCGCGGCG TTGTCGGGTATCGGA TERM 4466 6692159 - 6692172 + F 81 -4.5 -5.06816 | GTCATCTTACGATTT CGCAG AGCC CTGTG TTTTTGTTAAACAGT TERM 4467 6697459 - 6697484 + G 85 -13.2 -4.14739 | TCTGACCGGTCTCTG CGGCGCAGCC CTGATC GGCGGCGCCG TTTTCGCGTCGCTCG BRADO6447 6697298 - 6699349 + | putative metalloendopeptidase BRADO6448 6700804 - 6699437 - | hypothetical protein TERM 4468 6700750 - 6700760 + g 77 -5.4 -4.63218 | opp_overlap 6700740, overlap 6700740 TGAAACTCTTGATCA TCTC CAA GAGA TTTTCTTCGGAGACG BRADO6449 6701760 - 6700849 - | hypothetical protein TERM 4469 6702087 - 6702066 - R 100 -17.3 -4.65895 | GTCGCGACTGAAAAA GCCCCTCCG CAAG CGGAGGGGC TTCGCCAGATCATCC clpB 6704784 - 6702145 - | chaperone TERM 4470 6702244 - 6702264 + g 74 -15.5 -2.55351 | opp_overlap 6702246, overlap 6702229 6702243 6702246 6702263 GTTGCCTTCCGAGGA GATGGCGAC CTT GTCGCCATC CTTGATGTCGCCGGC BRADO6451 6704970 - 6705797 + | hypothetical protein TERM 4471 6705972 - 6705931 - T 83 -16.5 -2.94099 | gap 1, opp_overlap 6705957, overlap 6705939 GTTCGGCATCACATA CGCATACACGCGGCCGCGCG ACA CG-GCGGCCTCGCGGACGCG GTGGCCGTAATTGCC BRADO6452 6706518 - 6705913 - | hypothetical protein TERM 4472 6705972 - 6705939 - G 70 -13 -2.94354 | opp_overlap 6705957, overlap 6705931 TCACATACGCATACA CGCGGCCGCGCGAC ACGGCG GCCTCGCGGACGCG GTGGCCGTAATTGCC TERM 4473 6706069 - 6706032 - G 85 -17.7 -2.62616 | gap 1 CGACGCCCGAGACCA CGCCGACATG-GCCGCCG CCG CGGCGGCTCATCACGGCG ATGGCGCCGACCTGC TERM 4474 6706692 - 6706675 - H 76 -5.6 -4.57569 | CGAGGCCCGTAAAAA GTTTGG ATGTGA CCAAAC CATGACCATCGATGG BRADO6453 6706835 - 6707698 + | alpha/beta superfamily hydrolase TERM 4475 6707743 - 6707793 + T 83 -15.5 -3.14564 | gap 1, overlap 6707746 CCATCGACGCCTCGC CACCCGCTTTCGTCCGTGCGAACG CAGG CATTCGCAGGGACGACGGC-GGTG TTAGTGGCGCACTCC TERM 4476 6707746 - 6707791 + T 91 -18.3 -3.13522 | overlap 6707743 TCGACGCCTCGCCAC CCGCTTTCGTCCGTGCGAACG CAGG CATTCGCAGGGACGACGGCGG TGTTAGTGGCGCACT TERM 4477 6707868 - 6707818 - T 83 -14.7 -3.53224 | gap 1 CACTCCGGGCTCAAA TTGCCGCCTCCACCA-GCCGCTGC CGCA GCAGCGGCACGGCGAAGTCGACGA AAGCGCGCAGCTTAA BRADO6454 6708730 - 6707813 - | LysR family transcriptional regulator TERM 4478 6708801 - 6708791 - H 73 -8.2 -4.09108 | overlap 6708792 TGGAAGGCATAGAAA CCGG GGA CCGG CGGCCGGCGATCGTT BRADO6455 6708815 - 6709714 + | alpha/beta superfamily hydrolase TERM 4479 6709946 - 6709898 - T 75 -14 -3.06183 | gap 2, opp_overlap 6709894 6709898 GCGAGCGCCAGTGAA GCGATCCAGGGGC-CA-CACGGAA AGA CTCCGCACTTTGCCCCTGGATCGC TTCGTCGCTTCGCTC BRADO6456 6710539 - 6710021 - | putative kinase BRADO6457 6711004 - 6710585 - | hypothetical protein BRADO6458 6712348 - 6711071 - | hypothetical protein TERM 4480 6712385 - 6712441 + r 100 -26.7 -3.90318 | opp_overlap 6712382, overlap 6712389 GGGAATGAAGATCGC TTTGCACGACGGGCAGTCCGCGCATGC CCC GCATGCGCCAACTGCCCGTCGTGTTAG TTTGTCGCATACTCC TERM 4481 6712389 - 6712437 + r 100 -31.9 -3.61244 | opp_overlap 6712382, overlap 6712385 ATGAAGATCGCTTTG CACGACGGGCAGTCCGCGCATGC CCC GCATGCGCCAACTGCCCGTCGTG TTAGTTTGTCGCATA TERM 4482 6712616 - 6712604 - R 71 -9.1 -3.71848 | CGCGCGGACGAACAA GTGCG GCA CGCAC GGTCAAGTCGCGCGG BRADO6460 6713859 - 6713197 - | putative methionine biosynthesis protein (MetW) metX 6715086 - 6713863 - | homoserine O-acetyltransferase TERM 4483 6715167 - 6715141 - H 100 -14.5 -4.7373 | gap 1, opp_overlap 6715160 6715161, overlap 6715126 TCAGGCCATGAAAAA CCCGGCCTGAAC TGGG GTTC-GGCCGGG ATCGATAACGTCCCC TERM 4484 6715161 - 6715186 + H 72 -11.7 -3.37685 | opp_overlap 6715141, overlap 6715160 CCTGAACTGGGGTTC GGCCGGGATCG ATAA CGTCCCCGGCC TGTTTAGCGAGTTTT BRADO6462 6715447 - 6716280 + | hypothetical protein hisC 6716312 - 6717415 + | histidinol-phosphate aminotransferase TERM 4485 6718031 - 6718013 - g 71 -14.6 -2.62616 | TGATCGCCTACACCA TCGTCGGC ACC GCCGACGA GCTGGCGCAGGTGAC tyrC 6717412 - 6718347 + | cyclohexadienyl dehydrogenase BRADO6465 6719534 - 6718350 - | hypothetical protein BRADO6466 6719634 - 6720230 + | putative cation transport protein chaC-related BRADO6467 6721004 - 6720237 - | putative 1-acylglycerol-3-phosphate O-acyltransferase (plsC) BRADO6468 6721682 - 6721017 - | hypothetical protein ftsX 6722954 - 6721986 - | cell division ABC transporter (membrane component) ftsE 6723606 - 6722947 - | cell division ABC transpoter ATP-binding protein BRADO6471 6723897 - 6724676 + | hypothetical protein BRADO6472 6724731 - 6725111 + | putative two-component response regulator TERM 4486 6725516 - 6725559 + G 70 -10.8 -3.53091 | gap 1, opp_overlap 6725518, overlap 6725518 ATCGCGGACGTCAAC GAGCGC-CGCCGCGAGTCGGC GCT GCCGCTGCGCGACGCGCGCTA TTTCGCGGCCCGGCT TERM 4487 6725518 - 6725557 + G 73 -13.4 -3.34398 | gap 1, opp_overlap 6725518, overlap 6725516 CGCGGACGTCAACGA GCGC-CGCCGCGAGTCGGC GCT GCCGCTGCGCGACGCGCGC TATTTCGCGGCCCGG TERM 4488 6725557 - 6725518 - g 72 -15.1 -2.73364 | gap 3, opp_overlap 6725518 6725516 CGCGGACGTCAACGA GCGC-CGCCGCG-AGTCGGC GCT GCCG-CTGCGCGACGCGCGC TATTTCGCGGCCCGG BRADO6473 6725294 - 6725818 + | transcription elongation factor regulatory protein TERM 4489 6726073 - 6726091 + G 77 -13.2 -3.57144 | GCCGGACCTTCCATC TCGTGCAC GAC GTGCACGA TTTCAGGATCGACCC BRADO6474 6725811 - 6726299 + | putative phosphodiesterase (yfcE) BRADO6475 6727094 - 6726300 - | putative signal peptide TERM 4490 6727129 - 6727096 - R 90 -15.9 -3.72576 | gap 1, opp_overlap 6727098, overlap 6727097 CTGGCGCGCAGCAAA GCGCGGGCGCCGCGGC GGC GACGCGGCGCG-GCGC GTGATCCATTCCGAT TERM 4491 6727130 - 6727097 - R 79 -15.9 -2.83403 | gap 1, opp_overlap 6727098, overlap 6727096 TGGCGCGCAGCAAAG CGCG-GGCGCCGCGGC GGC GACGCGGCGCGGCGCG TGATCCATTCCGATC BRADO6476 6729410 - 6727167 - | hypothetical protein BRADO6477 6730219 - 6730506 + | hypothetical protein BRADO6478 6730503 - 6730805 + | putative plasmid stabilisation system protein BRADO6479 6730909 - 6731133 + | hypothetical protein BRADO6480 6731130 - 6731651 + | hypothetical protein BRADO6481 6731760 - 6732161 + | putative transposase (fragment) TERM 4492 6732409 - 6732386 - g 70 -6.6 -4.20918 | opp_overlap 6732382 6732387, overlap 6732387 GTCAATGCCAAGAAA GTCCTGCGGC TCAT GCGGCAGGAT AATCTTCTCGCGCAG BRADO6482 6732158 - 6733015 + | transposase BRADO6483 6733664 - 6733191 - | hypothetical protein TERM 4493 6733727 - 6733711 - R 75 -3.7 -4.6902 | CCAGAAGTTCAAAAA GTGCA TTGTTGC TGCAC CCGCCCGGGGCGATG argC 6734758 - 6733784 - | N-acetyl-gamma-glutamyl-phosphate reductase (AGPR) (N-acetyl-glutamate semialdehyde dehydrogenase) (NAGSA dehydrogenase) lysA 6736633 - 6735293 - | diaminopimelate decarboxylase TERM 4494 6736054 - 6736074 + g 70 -2.6 -4.67353 | gap 1 GGATGCCGAACTTGT TCTCCGACT TGCC GGTCG-AGA TTTTTGCGTGCGTGC BRADO6486 6737170 - 6736895 - | hypothetical protein argH 6738660 - 6737269 - | argininosuccinate lyase TERM 4495 6738840 - 6738863 + G 70 -8.8 -3.90112 | GCGCCGTGGCGGTCG CTGCCGTGGT CGGC ATCGCGGCGG TTTCGTTCGGGGGAC tlpA 6738755 - 6739444 + | Thiol:disulfide interchange protein tlpA (cytochrome c biogenesis protein tlpA) BRADO6489 6739786 - 6739589 - | hypothetical protein hbdA 6740808 - 6739867 - | 3-hydroxybutyryl-CoA dehydrogenase TERM 4496 6740840 - 6740804 - G 93 -16.5 -3.9644 | opp_overlap 6740808, overlap 6740806 GCCCTAACAGAATAA GACACCGGCCGCGACAG TCC CCTCCGCGGCCGGTGTA TCCCACGTTACTTGC TERM 4497 6740838 - 6740806 - G 95 -19.1 -3.56921 | opp_overlap 6740808, overlap 6740804 CCTAACAGAATAAGA CACCGGCCGCGACAG TCC CCTCCGCGGCCGGTG TATCCCACGTTACTT etfA 6741783 - 6740848 - | electron transfer flavoprotein subunit alpha etfB 6742532 - 6741783 - | electron transfer flavoprotein subunit beta TERM 4498 6741902 - 6741927 + g 71 -12.5 -3.30124 | overlap 6741885 CGAGCCGCGGGGTGA GATCGACGCCG GTGT CGGCGGCGGTC TTCTCGGCGATCGGC TERM 4499 6742657 - 6742629 - R 77 -2.4 -5.02074 | gap 1, opp_overlap 6742636 CGAGGGGCGAAAAAA CGCCA-CCCCG CACGCCCC CGGGGCTAACG GTTTTGCCCTGGCAC BRADO6493 6743224 - 6742652 - | putative ATP:cob(I)alamin adenosyltransferase, monofunctional PduO type BRADO6494 6743453 - 6743259 - | hypothetical protein TERM 4500 6744065 - 6744075 + Gr 71 -8.2 -3.89614 | overlap 6744060 CGCTGATGCTCGCCA CCGC AAG GCGG TTTCTGCCGCTTGCG BRADO6496 6745558 - 6744404 - | sensor histidine kinase BRADO6495 6743572 - 6744477 + | ribonuclease BN-like family transmembrane protein TERM 4501 6745706 - 6745721 + Tr 71 -6 -4.38712 | overlap 6745707 GTGCTTCTGCAACGG CCGCGC CTTC GCGCGC TTTTCTGCCGGTGCA BRADO6498 6747025 - 6746156 - | glutamyl-Q tRNA(Asp) synthetase BRADO6499 6747151 - 6747804 + | putative DNA-3-methyladenine glycosidase BRADO6500 6747875 - 6749002 + | hypothetical protein BRADO6501 6749072 - 6750043 + | hypothetical protein TERM 4502 6750040 - 6750070 + F 84 -15.5 -3.3164 | GCAGCGGGTTTCGGC CTGAGGCGATCAG GCGAG CTGATCGCCTCCG TTCTGCAAGTGAGTT BRADO6502 6750256 - 6750813 + | putative HNH endonuclease:HNH nuclease TERM 4503 6750867 - 6750818 - f 78 -15.8 -2.79183 | gap 3 TGGACCCGTAGCATA TCGAGCCGCC--CGCGATGGTGGCC CGC GGTCACCTTCGCGATGGCGGC-CGA TCGGCTGTAAGGCCG BRADO6503 6751165 - 6752103 + | putative ABC transporter ( ATP-binding protein) TERM 4504 6752707 - 6752733 + G 75 -11.5 -3.68024 | gap 1, opp_overlap 6752699 6752706 6752707, overlap 6752708 AAATGAACGTGAAAT CCGCCGCCGGCG GCAT CGC-GGCCGCGG TTGTGTATTACGCCG BRADO6504 6752103 - 6753326 + | putative ABC transporter (permease protein) crtW 6754099 - 6753323 - | Beta-carotene ketolase (Beta-carotene oxygenase) TERM 4505 6753684 - 6753671 - GT 74 -2.3 -4.74132 | overlap 6753672 ATAGTGCAGGAAAAA GCTGG CGAA CCAGT GCCAGAAGCCGTGCG crtB 6755078 - 6754071 - | phytoene synthase TERM 4506 6754436 - 6754395 - GR 76 -9.3 -4.07568 | overlap 6754396 6754434 GCTGGCCTCGTAAAA CTGCTCCGCGACATCGAGC AGCC GCGCGACGACACGGAACAC CGCCTGCCGATGCTG TERM 4507 6754435 - 6754396 - GR 71 -12.8 -3.04398 | overlap 6754395 6754434 CTGGCCTCGTAAAAC TGCTCCGCGACATCGAGC AGCC GCGCGACGACACGGAACA CCGCCTGCCGATGCT crtI 6756595 - 6755075 - | phytoene dehydrogenase (phytoene desaturase) crtY 6757776 - 6756592 - | lycopene cyclase TERM 4508 6757806 - 6757785 - H 76 -12.9 -3.44527 | GACTCATGACGACAA CGCAGCGCG CTCA CGCGCGGCG ATAACCGGCCGAGCC TERM 4509 6758949 - 6758911 - g 72 -6.7 -4.16842 | gap 1 GGCACCGGCAAGAAA TCCGCCGG-ACGCGAC GATCTGCG GCCGCATGCCGGCTGA AGCCCGGGACAGCCC crtE 6757999 - 6758949 + | geranylgeranyl pyrophosphate synthetase (GGPP synthetase) (farnesyltranstransferase) TERM 4510 6760323 - 6760373 + G 83 -16 -3.53224 | ACCCTGCAGCGCCGC CTCGATGCCGAGCTGCCGGCGGCC CTG GCCCGCCGCGAGCTCCACGTCGAG TTTCAGCCGCAGGTC BRADO6510 6759159 - 6761117 + | diguanylate cyclase domain/phosphodiesterase domain-containing protein BRADO6511 6761792 - 6762775 + | phosphotransferase family protein BRADO6512 6762858 - 6763262 + | hypothetical protein TERM 4511 6763623 - 6763638 + F 70 -11.8 -3.1552 | overlap 6763620 GGTGTGGCCGGGCAT GCGCGC ATCC GCGCGC TGTTAGTCCCTGACA BRADO6514 6763682 - 6764821 + | hypothetical protein BRADO6515 6764818 - 6765441 + | class I peptide chain release factor domain-containing protein BRADO6516 6765756 - 6767015 + | putative chaperone protein (yegD) TERM 4512 6767035 - 6767054 + T 70 -12.1 -3.14132 | CCGGCTCATCGCTCC GCCGCGG GTGCCG CCGCGGC TTCCTGCGCGCGCAG BRADO6517 6768647 - 6767025 - | hypothetical protein TERM 4513 6767136 - 6767105 - G 81 -12.2 -3.80573 | gap 1, opp_overlap 6767105, overlap 6767107 GCGACGATGACGAAA CACCCGGCGGGC-GC GCG GCTGCGCGCCGGGTC GACACGGTCGGGACG TERM 4514 6767134 - 6767107 - G 81 -14.8 -3.48738 | gap 1, opp_overlap 6767105, overlap 6767105 GACGATGACGAAACA CCCGGCGGGC-GC GCG GCTGCGCGCCGGG TCGACACGGTCGGGA BRADO6519 6770680 - 6769085 - | hypothetical protein BRADO6520 6772389 - 6770848 - | hypothetical protein TERM 4515 6772081 - 6772069 - G 71 -9.1 -3.84406 | GGCCGAGGAGAAGAA CGTGC TCG GCACG AGGTCGACCGTCCGC TERM 4516 6772381 - 6772398 + g 76 -6.3 -4.44667 | opp_overlap 6772373, overlap 6772380 CACGACACCTCGACT CGAGTTC ACCC GAATTCG TTTGTTATTGCGGCA TERM 4517 6772452 - 6772473 + H 79 -13.7 -3.48924 | AACCTTGAGCCCGAC CCGTCGCAG TGAC CTGCGGCGG TTGTATGCACGCTGC BRADO6521 6772719 - 6773237 + | putative acetyltransferase BRADO6522 6774195 - 6773272 - | alpha/beta family hydrolase BRADO6523 6774435 - 6776012 + | transcriptional regulator BRADO6524 6776181 - 6776342 + | putative Flp/Fap pilin component TERM 4518 6776406 - 6776427 + T 100 -15.1 -4.67641 | overlap 6776392 CGCCATGGTCGGACA GGCCGGGCT CTTG GGCCCGGCC TTTTGCTTTTGCGAT tynA 6778654 - 6776651 - | tyramine oxidase BRADO6526 6779853 - 6778663 - | putative beta-lactamase family protein; putative 6-aminohexanoate-dimer hydrolase BRADO6528 6780037 - 6781053 + | AraC family transcriptional regulator TERM 4519 6781101 - 6781084 - f 75 -4 -4.72272 | overlap 6781085 6781097 CTGTTGGACCAAAAA CGGCGC GCACAA GCGCCT GACGATGCGGAGGAC TERM 4520 6781787 - 6781763 - g 75 -15.7 -2.79183 | opp_overlap 6781753 TCGATGCCGAGGAGA CGCTGCGGCTG ATC CAGGCGCAGCG CATCCAATGGGTGAA BRADO6529 6781120 - 6782637 + | putative acyl-CoA ligase BRADO6530 6782687 - 6784153 + | FAD binding domain-containing protein BRADO6531 6784132 - 6784590 + | hypothetical protein BRADO6532 6784587 - 6785690 + | putative signal peptide BRADO6533 6785704 - 6785979 + | hypothetical protein BRADO6534 6786178 - 6787149 + | putative serine protease BRADO6535 6789154 - 6787163 - | hypothetical protein BRADO6537 6789450 - 6790514 + | hypothetical protein BRADO6538 6790694 - 6792001 + | hypothetical protein BRADO6539 6792005 - 6792823 + | hypothetical protein BRADO6540 6792914 - 6793120 + | hypothetical protein TERM 4521 6793143 - 6793171 + T 100 -16 -4.11623 | CACCGCTCGTTTGCA GGGCGCCTCGAC CTCGT GTCGGGGCGTCC TTTGCTTTGCTCCTA BRADO6541 6793756 - 6793184 - | hypothetical protein TERM 4522 6793396 - 6793425 + g 73 -10.7 -3.66874 | gap 1 GATCGACATCGATGC CG-GCTTCGGCGAG CAG CTCGTCGATGCGCG TTTCCGTGAGCTTGG TERM 4523 6793802 - 6793786 - R 72 -4.3 -4.56597 | opp_overlap 6793800, overlap 6793795 CTCCGGCGCCAAAAA GCGAAAG AAG CTCGCGC CGGCTGCTGGCCTGG BRADO6542 6794637 - 6793852 - | hypothetical protein TERM 4524 6794772 - 6794734 - R 91 -17.4 -3.34962 | overlap 6794736 6794739 TGCGATACTCGATAA CAGGAGCGGCCGGACGCA CGC TGCATCCGGCCGCCACCA CGTCATGCGATCACA TERM 4525 6794770 - 6794736 - R 95 -20 -3.24365 | overlap 6794734 6794739 CGATACTCGATAACA GGAGCGGCCGGACGCA CGC TGCATCCGGCCGCCAC CACGTCATGCGATCA TERM 4526 6794767 - 6794739 - R 100 -22.5 -2.8055 | overlap 6794736 6794734 TACTCGATAACAGGA GCGGCCGGACGCA CGC TGCATCCGGCCGC CACCACGTCATGCGA BRADO6543 6795262 - 6794792 - | putative signal peptide BRADO6544 6795556 - 6795798 + | hypothetical protein TERM 4527 6795805 - 6795840 + F 95 -19.6 -3.29511 | opp_overlap 6795789 6795796, overlap 6795806 CCGAAATGATCCGCA TGCCGGCCGGGTTCGC GGAC GCGCGCCCGGCCGGCC TTCTCCCCACCTGCA TERM 4528 6795806 - 6795839 + F 100 -23.1 -2.57564 | opp_overlap 6795789 6795796, overlap 6795805 CGAAATGATCCGCAT GCCGGCCGGGTTCGC GGAC GCGCGCCCGGCCGGC CTTCTCCCCACCTGC BRADO6545 6795915 - 6797000 + | hypothetical protein BRADO6546 6797494 - 6796997 - | putative disulfide bond formation protein B (disulfide oxidoreductase) (dsbB) BRADO6547 6799239 - 6798517 - | hypothetical protein BRADO6548 6799753 - 6799971 + | hypothetical protein BRADO6549 6799981 - 6800601 + | hypothetical protein BRADO6550 6800626 - 6800760 + | hypothetical protein BRADO6552 6801476 - 6801204 - | putative signal peptide BRADO6553 6802833 - 6801607 - | major facilitator superfamily permease BRADO6554 6803632 - 6802946 - | putative extracellular metal-binding protein nadE 6805882 - 6803846 - | NAD synthetase TERM 4529 6805784 - 6805736 - G 77 -13.1 -3.55071 | overlap 6805738 6805739 GCACAGCTCGGGAAA CACCGCGACCGCCGCGC-CCTGC TCATG GCAGGCGCGCG-CGGCCGCCAGG ATCGCCGCCGCGTTG TERM 4530 6805782 - 6805738 - G 77 -14.3 -3.35224 | overlap 6805736 6805739 ACAGCTCGGGAAACA CCGCGACCGCCGCGC-CCTGC TCATG GCAGGCGCGCG-CGGCCGCCA GGATCGCCGCCGCGT TERM 4531 6805781 - 6805739 - G 74 -15.6 -2.60813 | overlap 6805738 6805736 CAGCTCGGGAAACAC CGCGACCGCCGCGC-CCTGC TCATG GCAGGCGCGCG-CGGCCGCC AGGATCGCCGCCGCG TERM 4532 6806186 - 6806168 - g 73 -13.1 -3.28712 | opp_overlap 6806179 GCGCGGCGCCGAGAA GCGCGCG CAGTT CGCGCGC TACGCGCTCGATCTG BRADO6556 6806064 - 6806912 + | hypothetical protein BRADO6557 6807591 - 6806932 - | TetR family transcriptional regulator BRADO6558 6807657 - 6808574 + | putative short-chain dehydrogenases/reductase BRADO6559 6808689 - 6809168 + | hypothetical protein TERM 4533 6809216 - 6809190 - T 83 -6.4 -4.82901 | opp_overlap 6809194, overlap 6809194 CTTGCTCCAGAAAAA CGAAGGCCGTGC AAT GCGCGGCCTTTT CCCATTCAGCTTTCC TERM 4534 6809212 - 6809194 - T 81 -11.6 -3.88001 | opp_overlap 6809194, overlap 6809190 CTCCAGAAAAACGAA GGCCGTGC AAT GCGCGGCC TTTTCCCATTCAGCT TERM 4535 6809194 - 6809212 + T 93 -13.8 -4.19506 | opp_overlap 6809194 6809190 CTCCAGAAAAACGAA GGCCGTGC AAT GCGCGGCC TTTTCCCATTCAGCT TERM 4536 6809265 - 6809243 - T 74 -9.8 -3.81146 | TTCCTGAACCAATAA TGACGCGCCA GCG CGGCCCGTCA GATCGCGGCCGCCAC BRADO6560 6809895 - 6809263 - | putative signal peptide BRADO6561 6810343 - 6810077 - | hypothetical protein BRADO6562 6811405 - 6810431 - | hypothetical protein BRADO6563 6812028 - 6811462 - | hypothetical protein BRADO6564 6812318 - 6813826 + | acyl-CoA synthetase BRADO6565 6814439 - 6814047 - | hypothetical protein BRADO6566 6814715 - 6816406 + | putative methyl-accepting chemotaxis protein TERM 4537 6816495 - 6816449 - T 100 -26.7 -3.17075 | opp_overlap 6816473 CCGCTCTCAACCCAA CGACGGTGAACTCCCCTCCCC CTTGC GGGGAGGGGAGCGCACCGTCA CGGCCTCACCGCTTC BRADO6567 6817292 - 6816501 - | hypothetical protein minE 6817571 - 6817296 - | cell division topological specificity factor MinE minD 6818383 - 6817568 - | septum site-determining protein minD (cell division inhibitor minD) minC 6819108 - 6818404 - | septum formation inhibitor TERM 4538 6818438 - 6818480 + g 72 -14.9 -2.78935 | opp_overlap 6818435 TTCATGGAATGACCT TCGA-GCCGCGCCTGCGCGGC CTT GCCACGCAGCC-CGGCGTCGA TCTGCTCGGCGGTCT BRADO6572 6819846 - 6820259 + | hypothetical protein BRADO6573 6820302 - 6821933 + | putative ABC-type branched-chain amino acid transport system, periplasmic component BRADO6574 6822156 - 6823595 + | putative ABC-type branched-chain amino acid transport system, periplasmic component BRADO6575 6823893 - 6825383 + | putative ABC-type branched-chain amino acid transport system, periplasmic component TERM 4539 6825415 - 6825441 + T 100 -23.8 -4.05788 | ATTGTTCGACCGATG GACGCGGCAGCC TGA GGCTGCCGCGTC TTTCATTTCGGCCGG BRADO6576 6826620 - 6825652 - | putative dioxygenases related to 2-nitropropane dioxygenase TERM 4540 6826049 - 6826022 - G 77 -12.6 -3.65425 | CCGATATAGGCGAAA TCGGCGCCGAGC ACGC GCGCGGCGCGGA TGGCGCGGCCATTGG BRADO6577 6827388 - 6826771 - | putative signal peptide BRADO6578 6827969 - 6827388 - | hypothetical protein BRADO6579 6828434 - 6828033 - | phosphoribosyl-ATP pyrophosphohydrolase (hisE-like) TERM 4541 6828485 - 6828454 - R 71 -5.8 -4.31043 | gap 1, overlap 6828458 ACACAATAGTTAAAA TCAATGGCG-GCGGT GTT AACGCTCGCCAGCGA CATAAAAAAATCCGC TERM 4542 6828494 - 6828521 + r 89 -12.7 -4.11692 | opp_overlap 6828496, overlap 6828496 CCAGCGACATAAAAA AATCCGCCGGC ACAGAG GCCGGCGGATC TTTTCACGATCGATC TERM 4543 6828519 - 6828496 - R 100 -15.3 -5.72616 | opp_overlap 6828494 6828496 AGCGACATAAAAAAA TCCGCCGGC ACAGAG GCCGGCGGA TCTTTTCACGATCGA TERM 4544 6828496 - 6828519 + r 86 -15.3 -3.65542 | opp_overlap 6828496, overlap 6828494 AGCGACATAAAAAAA TCCGCCGGC ACAGAG GCCGGCGGA TCTTTTCACGATCGA BRADO6580 6828938 - 6828540 - | putative signal peptide BRADO6581 6829221 - 6830279 + | putative signal peptide BRADO6582 6830388 - 6832178 + | cyclic beta-1,2-glucan ABC transporter TERM 4545 6832306 - 6832329 + F 77 -13.8 -3.28712 | CCGAAAGCCCGTTTG CCCACCTCGC TCGC GCGAGGCGGG TTCTCAAAGGACCGG BRADO6583 6832354 - 6833784 + | putative D-alanyl-D-alanine carboxypeptidase fadD 6833975 - 6835666 + | acyl-CoA synthetase BRADO6585 6835843 - 6836280 + | putative peroxiredoxin rnhA 6837115 - 6836651 - | ribonuclease H (RNase H) thrB 6838083 - 6837112 - | homoserine kinase TERM 4546 6837846 - 6837816 - G 79 -16.1 -3.07344 | gap 1 CCAGGCTGGAATACA CCGC-GCCGTCGCG GTTG CGCGCCGGCTGCGG GCAGTTGACGCCGCG TERM 4547 6838240 - 6838222 - R 76 -8.8 -4.17048 | GCGGGTGGAAAAGAA CCGCCG GCCTACT CGGCGG CCGCTTCCGGGCGCA ispH1 6839171 - 6838230 - | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 1 TERM 4548 6839679 - 6839666 - g 70 -5.9 -4.24948 | CGAGGAGATCGAAAA GGCCG AGCG CGACC CCAATTACCGGCTCC TERM 4549 6840027 - 6839993 - g 76 -6.2 -4.54727 | overlap 6840011 6840013 CGCCGCAAAGGAAAA GCCGCTCGACGCCAAT TAC AGCGGCGCCACGCTGC TGCCGGCCTCCGAGA BRADO6589 6839466 - 6840161 + | hypothetical protein TERM 4550 6840438 - 6840417 - T 100 -17.3 -5.40072 | TTCCCTCGAAAAAAA TGGCGCCGG TCAA CCGGCGCCA TTCAAGTCTGGAAGG BRADO6590 6841196 - 6840465 - | putative outer membrane protein precursor BRADO6592 6841633 - 6841391 - | putative signal peptide BRADO6593 6843814 - 6841910 - | putative propionate--CoA ligase (propionyl-CoA synthetase) BRADO6594 6844845 - 6844075 - | TPR repeat-containing protein BRADO6595 6845715 - 6844915 - | putative short-chain dehydrogenase; putative 3-oxoacyl-[acyl-carrier-protein] reductase BRADO6596 6846109 - 6845735 - | hypothetical protein BRADO6597 6848199 - 6846106 - | C4-dicarboxylate transporter TERM 4551 6848280 - 6848307 + r 82 -11.2 -4.07568 | opp_overlap 6848282, overlap 6848281 6848284 GCTACCTGAAACGAG AAGACTGCGCGG GAGC CCGCGCAGTCGA TTTTGGAAACGAGCC TERM 4552 6848281 - 6848306 + r 78 -14.7 -3.04398 | opp_overlap 6848282, overlap 6848280 6848284 CTACCTGAAACGAGA AGACTGCGCGG GAGC CCGCGCAGTCG ATTTTGGAAACGAGC TERM 4553 6848305 - 6848282 - R 100 -18.2 -3.60865 | opp_overlap 6848281 6848280 6848284 TACCTGAAACGAGAA GACTGCGCGG GAGC CCGCGCAGTC GATTTTGGAAACGAG TERM 4554 6848284 - 6848303 + r 75 -15 -2.74605 | opp_overlap 6848282, overlap 6848281 6848280 CCTGAAACGAGAAGA CTGCGCGG GAGC CCGCGCAG TCGATTTTGGAAACG TERM 4555 6848342 - 6848365 + r 84 -8.1 -4.51174 | overlap 6848330 6848343 TTCGGGCGGCGCAGG CGGCGTCCT TACTTC AGGACGCCC TTTTCCTTGTAGTAG TERM 4556 6848343 - 6848364 + r 72 -11.6 -3.29981 | overlap 6848330 6848342 TCGGGCGGCGCAGGC GGCGTCCT TACTTC AGGACGCC CTTTTCCTTGTAGTA BRADO6598 6849312 - 6848350 - | putative TRAP-type uncharacterized transport system, periplasmic component TERM 4557 6849408 - 6849378 - R 70 -10.2 -3.6215 | overlap 6849380 TCAACCCATCCGAAA GACGGGCGGCCGCG CGC CGCGGCGGCGGGCC GTGGGTCAGCGACGG BRADO6599 6850023 - 6849547 - | hypothetical protein TERM 4558 6849856 - 6849835 - G 77 -5.1 -4.62069 | overlap 6849837 CTGGCAGCGGAAAAA CTCCGACGT CTTC ACGTTGAAG AGATAGGCGTAGGAC BRADO6600 6850194 - 6850496 + | putative signal peptide BRADO6601 6851862 - 6850681 - | hypothetical protein BRADO6602 6852517 - 6851888 - | putative NUDIX hydrolase TERM 4559 6852442 - 6852480 + g 70 -6.5 -4.22652 | opp_overlap 6852461 GCGGCGTCCCGGCCA TCGTGTCCAGGCGCACG AAGCC CGCGCAGCAGGACGCGA TTTTCCGTCGTGTGG BRADO6604 6852598 - 6853020 + | hypothetical protein TERM 4560 6853080 - 6853057 - f 84 -16 -3.09635 | gap 1 AGTGCGAGGAGCCAA CGGGTCCGCGC AAG GCGCGG-CCCG ATGACAGGCTCCGCG BRADO6605 6853219 - 6854229 + | putative oxidoreductase (aldo/keto reductase); putative aryl-alcohol dehydrogenase (NADP+) TERM 4561 6855494 - 6855532 + G 71 -14.4 -2.8194 | overlap 6855496 GATGCCCGCCTGCAC CGCCGCCCCTCCGCGCGT GAC ACGCGCTGGCGGGCGCTG TCTACTGAGTAGTTC TERM 4562 6855496 - 6855530 + G 70 -13.4 -2.95476 | overlap 6855494 TGCCCGCCTGCACCG CCGCCCCTCCGCGCGT GAC ACGCGCTGGCGGGCGC TGTCTACTGAGTAGT BRADO6606 6854231 - 6855544 + | cellulose synthase TERM 4563 6855721 - 6855672 - T 74 -9.9 -3.68988 | gap 1, overlap 6855669 GCGGACGCAAGACAA GCTCGAGATTCCGGGTTCAAGGCC TGC GGCCTTGC-CCCGGAATGACGTCC CTGGCCAAGAGGCCG BRADO6607 6856704 - 6855739 - | putative 3-hydroxyisobutyrate dehydrogenase TERM 4564 6856800 - 6856760 - R 74 -14.9 -2.55544 | gap 1, opp_overlap 6856759 6856764, overlap 6856756 6856764 6856768 CGAGGAGCGAAGCGA CGAAGCAACCCAGAGTCC TTGCTC GG-CCCTGGATTGCTTCG CTTCGCTCGCAATGA BRADO6608 6858175 - 6856859 - | putative aminopeptidase; putative proline or methionine dipeptidase BRADO6609 6858369 - 6859343 + | LacI family transcriptional regulator dan 6860804 - 6859344 - | D-aminoacylase (N-acyl-D-amino-acid deacylase) TERM 4565 6861540 - 6861597 + G 70 -11.7 -3.40403 | GGTCGAGCCGGGCTC CAGCGTGGCCATCGTCGGCGCCGGCCC GATC GGGTTGGCGTCGCTACTGACCGCGCAG TTCTACTCGCCGGCC BRADO6611 6861037 - 6862074 + | putative zinc-dependent alcohol dehydrogenase (oxidoreductase); putative L-iditol 2-dehydrogenase glgA 6863563 - 6862097 - | glycogen synthase glgC 6864825 - 6863560 - | glucose-1-phosphate adenylyltransferase BRADO6614 6865917 - 6864970 - | putative fructokinase BRADO6615 6867566 - 6865929 - | putative sugar kinase (ribulo-/ribitol kinase) TERM 4566 6867413 - 6867365 - G 72 -11.6 -3.53444 | gap 1, opp_overlap 6867364, overlap 6867322 TCAGCTCCGGCGAAA TGGCG-GCCTCCGACAGCGCGGC TTTG ACCGCGGCGCAGCAGGCTCGCCA GATATTATCCGACGA BRADO6616 6868369 - 6867596 - | putative oxidoreductase; putative glucose/ribitol oxidoreductase TERM 4567 6868344 - 6868354 + g 73 -4 -4.60041 | AGCGCCGTCTTGCCG TTCA GCT TGAA TTTTTCCAGATACAT BRADO6617 6869424 - 6868417 - | putative ABC transporter, ATP-binding protein; putative carbohydrate transporter (maltose malK-like) TERM 4568 6868599 - 6868568 - G 84 -5.8 -4.90778 | gap 1 TCGACGTAAAGAAAA GTGTCGCT-GCCGAG ATG CTCGGCGATCAGCAC CTTGCCGCGCCAGCC BRADO6618 6870011 - 6869439 - | putative ABC transporter, permease protein (fragment); putative carbohydrate (maltose) transporter BRADO6619 6871144 - 6870272 - | putative ABC transporter, permease protein TERM 4569 6871193 - 6871234 + r 77 -15.3 -2.55544 | opp_overlap 6871192 6871197, overlap 6871187 6871197 6871201 6871232 TCATTGCGAGCGAAG CGAAGCAATCCAGGGGC GTGCGCGG GACTCTGGATTGCTTCG TCGCTTCGCTCCTCG TERM 4570 6871684 - 6871652 - R 100 -14.9 -4.55118 | overlap 6871653 CAAGCCTAGAGAAAA TGCGGCCATCCCT TGTGGGG AGGGATGGCCGCC AGTGATCAGCTCGGG TERM 4571 6871683 - 6871653 - R 93 -18.4 -3.32348 | overlap 6871652 AAGCCTAGAGAAAAT GCGGCCATCCCT TGTGGGG AGGGATGGCCGC CAGTGATCAGCTCGG BRADO6620 6873065 - 6871734 - | putative ABC transporter, periplasmic binding protein BRADO6621 6874357 - 6873407 - | transcriptional regulator TERM 4572 6873851 - 6873821 - G 82 -6.1 -4.72272 | gap 1, overlap 6873823 GCTGCCCATCAAAAA CGGCA-GCGGCATC GGGT AATGCCGGGCGCCG GTGCGGTCGGCCAGC TERM 4573 6874526 - 6874510 - H 74 -13.7 -2.87647 | ATTCAGCAGATCATA TGCCCGG CCG CCGGGCA ATAGCTCACCTCTAC BRADO6622 6874583 - 6874975 + | hypothetical protein BRADO6623 6875062 - 6875373 + | hypothetical protein BRADO6624 6875478 - 6875888 + | putative flagellar basal-body rod protein (flgC) TERM 4574 6876179 - 6876205 + G 76 -8.7 -4.2828 | gap 1, overlap 6876177 GCATGAGCGAGAGCT TCGGCCGCGTGC CCTG GC-CGTGGTCGA TTTTCGTCAATGCCG BRADO6625 6875992 - 6876807 + | hypothetical protein BRADO6626 6876804 - 6877199 + | hypothetical protein ubiG 6877225 - 6878007 + | bifunctional: 3-demethylubiquinone-9 3-methyltransferase; 2-octaprenyl-6-hydroxy phenol methylase BRADO6628 6878989 - 6878042 - | hypothetical protein BRADO6629 6879832 - 6879074 - | hypothetical protein TERM 4575 6879193 - 6879143 - G 72 -13 -3.14344 | GACCGGCGCCAGGAA CGCGGCGAAGACGTAGCCGTCGAG CAA CCCGTCGCCTTCGACATCGACGCG CACCCATGCCGGATC TERM 4576 6879888 - 6879860 - R 76 -6.6 -4.49556 | gap 1, overlap 6879863 CTTCGATCAAACAAA CAAGCC-GCCCGC AATG GCGGGCCGGCGCA ACTATCAAATCATTT TERM 4577 6879885 - 6879863 - R 95 -12.7 -4.35958 | gap 1, overlap 6879860 CGATCAAACAAACAA GCC-GCCCGC AATG GCGGGCCGGC GCAACTATCAAATCA BRADO6630 6880347 - 6880162 - | hypothetical protein TERM 4578 6880524 - 6880540 + H 71 -5.7 -4.25104 | GCTCGACCTCGGCGC GCGGCGT TCA GCTCCGC TTTTGATCCGCGGAA TERM 4579 6881843 - 6881805 - g 77 -5.3 -4.63218 | overlap 6881832 6881833 GGGCGCTCAAGAAAA TGGCGGCCGGCGAGCT-GA CCA TCGAAATCCCCGG-CGCCA CGCGCGGCGACGAGG TERM 4580 6881921 - 6881899 - g 71 -12.6 -3.30441 | GATCATCGGCGAGAA CGCCGAGCGC AGG GCGCGCGACG AGGCCGCGGCGCGGG TERM 4581 6882382 - 6882409 + G 76 -14.8 -3.14468 | gap 1, opp_overlap 6882353 6882348 TGCCACGATCGAGGC GGCGCGCGCCGGC GAC GCCGGC-CGCGGC TTCGCTGTCGTGGCG BRADO6631 6880784 - 6882814 + | putative methyl-accepting chemotaxis receptor/sensory transducer precursor TERM 4582 6884595 - 6884562 - g 75 -4.4 -4.60041 | opp_overlap 6884584, overlap 6884579 6884581 AGTGACGCGGAAAAA GCGGCGATGCGCGA GAAGAT TCGCGTCTCAACGC TGTCTCGACGCGCAG BRADO6632 6882855 - 6886148 + | hypothetical protein TERM 4583 6887160 - 6887142 - T 76 -5.8 -4.57569 | opp_overlap 6887143, overlap 6887109 6887143 TTACGGGCCCAAAAA GCCCGACG AGC CGGCGGGT TATAGTCAGACGGGA BRADO6633 6887477 - 6887283 - | hypothetical protein BRADO6634 6888155 - 6887526 - | Maf-like protein BRADO6635 6888808 - 6888338 - | putative arsenate reductase (ArsC-like) BRADO6636 6889369 - 6888863 - | hypothetical protein hisD 6890661 - 6889366 - | histidinol dehydrogenase BRADO6638 6891201 - 6890749 - | hypothetical protein murA 6892506 - 6891217 - | UDP-N-acetylglucosamine 1-carboxyvinyltransferase TERM 4584 6891429 - 6891383 - G 80 -17.3 -2.78384 | TCGGTCGCCATCACA GGCGCG-CCGCGCAGGGTCGAGA TGC CCTCGATCC-GCGCGGTCTCGCC GTCCAGACTGATACG BRADO6640 6894364 - 6892646 - | nucleotide-disulphide oxidoreductase TERM 4585 6892693 - 6892679 - G 72 -7 -4.16842 | CGGATCGGCAAGAAA GCCGTG CAG CGCGGC CACCACCTGAGCGCC BRADO6641 6894568 - 6894389 - | hypothetical protein poxB 6896890 - 6895160 - | pyruvate dehydrogenase TERM 4586 6896996 - 6896984 - H 76 -6.9 -4.45664 | overlap 6896985 CCAACCCAATCAAAA CCGCG TGG CGCGA AAGTTCCAGATTCGG BRADO6643 6897184 - 6897405 + | hypothetical protein TERM 4587 6897988 - 6898001 + G 79 -3.1 -5.02323 | GACGCTGCTGAAGCG GTTCT TCGA AGAGC TTTTCTTTGTAATGG BRADO6644 6897716 - 6899827 + | P-loop ATPase BRADO6645 6899973 - 6900533 + | hypothetical protein BRADO6646 6900589 - 6900768 + | 2-phosphosulfolactate phosphatase rbtD 6901536 - 6900808 - | ribitol 2-dehydrogenase (RDH) TERM 4588 6901699 - 6901680 - H 72 -12.2 -3.34398 | overlap 6901678 TCTCGTCCGCAAACA TCAGGAGC TGAA GCTCCTGA ACGGCTGCCTGCGGC TERM 4589 6902577 - 6902542 - g 85 -15.4 -3.71378 | opp_overlap 6902571, overlap 6902567 GATCTGACAGGCAAA CGCACGGCCGCCATTC TGCG GAACAGCCGCCGCGCG CGTCGCCGGTTTGCG TERM 4590 6902612 - 6902567 - g 72 -14.1 -3.02144 | gap 3, opp_overlap 6902571, overlap 6902542 CCATTCTGCGGAACA GCC--GCCGCGC-GCGTCGCCG GTTTG CGACGACGCTGCGCGGCCTGAC CGCGGAGCTCGACTT BRADO6648 6901696 - 6902919 + | hypothetical protein BRADO6649 6902984 - 6904603 + | putative ABC transporter, periplasmic binding protein TERM 4591 6904756 - 6904813 + T 100 -27.9 -3.13343 | GCGAAGCTCGATCAT GCCGGGTGAGGGGTCTCTTTCCGCG AATTCCCG TGCCGATAGAGACCCCTCACCCGGC TTCGATGCTTCGCAT TERM 4592 6904862 - 6904833 - T 78 -14.4 -3.05463 | gap 1, opp_overlap 6904829, overlap 6904837 ATGCTTCGCATCGAA GCCACCCTCTCCC ACAAG GGGAGAGGGTG-C ACCGTAGTTGGGGCT TERM 4593 6904859 - 6904837 - T 74 -14.9 -2.54896 | opp_overlap 6904829, overlap 6904833 TTCGCATCGAAGCCA CCCTCTCCC ACAAG GGGAGAGGG TGCACCGTAGTTGGG BRADO6650 6905944 - 6904931 - | putative metal ion transporter; putative Mg2+ transporter protein (CorA-like) BRADO6651 6907611 - 6906007 - | histidine kinase TERM 4594 6906039 - 6906076 + g 83 -13.4 -3.79909 | gap 1, opp_overlap 6906037 GGCCGTCGAGCAACT GCCGGACGCGACGCACC AGATC GGTGCGGCG-GTACGGC TTGTTGATGATTTCG TERM 4595 6906166 - 6906205 + g 86 -17.8 -3.14132 | gap 1 CAGCACCTTCAGCTT CGGC-TGGCGCTTGCGCGC TTC GCGCGCCAGCACCGTGCCG TTCATGCCGCCGGGC BRADO6652 6907845 - 6908759 + | AraC family transcriptional regulator TERM 4596 6908901 - 6908937 + F 77 -13.6 -3.35073 | gap 1 CTGCAGCGTCACCCC GGCTTCGGCCGG-GCTC CCCA GCGCGCCGGCCGGCGCC TTCGTTCCCGCTCAT BRADO6653 6908966 - 6909886 + | LysR family transcriptional regulator BRADO6654 6909943 - 6910647 + | putative 3-oxoacyl-[acyl-carrier-protein] reductase BRADO6655 6910906 - 6910658 - | hypothetical protein BRADO6656 6912634 - 6911195 - | putative glutamine synthetase (glnA4-like) TERM 4597 6912210 - 6912183 - G 73 -12.8 -3.41878 | gap 1 GCCTTGAACTGATAA CCACGCTGGTCGA GCG TCGAC-AGCGCGG AGCGCAGCAGATTGC BRADO6657 6914500 - 6913142 - | putative dioxygenase; putative phtalate dioxygenase oxygenase subunit TERM 4598 6914645 - 6914632 - g 74 -2.3 -4.74504 | AGCGCAAGTGAAAAA GCTAC AACC GAAGC CAAGGGGCAAACGGA BRADO6658 6914624 - 6915511 + | IclR family transcriptional regulator BRADO6659 6916610 - 6916251 - | hypothetical protein BRADO6660 6916635 - 6917336 + | putative hydrolase BRADO6661 6918026 - 6917610 - | hypothetical protein BRADO6662 6918656 - 6918045 - | TetR family transcriptional regulator BRADO6663 6918826 - 6919320 + | putative iron-sulfur-binding protein, subunit of an oxidoreductase like aldehyde oxidase or xanthine dehydrogenase (YagT-like) TERM 4599 6919469 - 6919431 - g 75 -11.6 -3.74693 | overlap 6919432 6919436 CTGGATCTGATGAAA GGCAATGTCGTCCGGCCG GAA CGGCTGGTCGACATCACG CAGATCAAGGAGCTC TERM 4600 6919468 - 6919432 - g 73 -15.1 -2.84602 | overlap 6919431 6919436 TGGATCTGATGAAAG GCAATGTCGTCCGGCCG GAA CGGCTGGTCGACATCAC GCAGATCAAGGAGCT TERM 4601 6919464 - 6919436 - g 78 -14.5 -3.30701 | overlap 6919432 6919431 TCTGATGAAAGGCAA TGTCGTCCGGCCG GAA CGGCTGGTCGACA TCACGCAGATCAAGG BRADO6664 6919317 - 6920375 + | putative aldehyde or xanthine dehydrogenase, FAD-binding subunit (YagS-like) BRADO6665 6920365 - 6922629 + | putative aldehyde or xanthine dehydrogenase protein, molybdenum binding subunit (YagR-like) TERM 4602 6922686 - 6922648 - T 100 -22.6 -2.75963 | opp_overlap 6922654, overlap 6922654 AGCCGCACGCCAAAC GACAAAGCCTCCGTTCCC GCC GGGAACGGAGGCTTTTCC TTGAGCAAAGAGGGT TERM 4603 6922680 - 6922654 - T 100 -22.4 -4.14056 | opp_overlap 6922654, overlap 6922648 ACGCCAAACGACAAA GCCTCCGTTCCC GCC GGGAACGGAGGC TTTTCCTTGAGCAAA TERM 4604 6922654 - 6922680 + T 100 -22.4 -4.4078 | opp_overlap 6922654 6922648 ACGCCAAACGACAAA GCCTCCGTTCCC GCC GGGAACGGAGGC TTTTCCTTGAGCAAA BRADO6666 6924697 - 6922709 - | putative methyl-accepting chemotaxis receptor/sensory transducer BRADO6667 6926593 - 6924881 - | putative methyl-accepting chemotaxis receptor/sensory transducer BRADO6668 6926872 - 6927183 + | hypothetical protein TERM 4605 6927376 - 6927394 + F 78 -11.6 -3.78436 | CTCCAATGCATCGAC GGCGCGCG CTG CGCGAGCC TTGTTAGTCTGAGTT BRADO6669 6927421 - 6928149 + | putative outer-membrane immunogenic protein precursor; putative secreted protein TERM 4606 6928212 - 6928175 - f 100 -9.1 -4.84182 | opp_overlap 6928184, overlap 6928184 TCAAAAAACAATAAA GCATCAAAAGGCCGGCA GCGA TGCCGGCCTTTCCTTGT CACAGGGTCCTCGTT TERM 4607 6928203 - 6928184 - f 100 -15 -4.41897 | opp_overlap 6928184, overlap 6928175 AATAAAGCATCAAAA GGCCGGCA GCGA TGCCGGCC TTTCCTTGTCACAGG TERM 4608 6928184 - 6928203 + F 93 -15 -3.9941 | opp_overlap 6928175 6928184 AATAAAGCATCAAAA GGCCGGCA GCGA TGCCGGCC TTTCCTTGTCACAGG TERM 4609 6928274 - 6928242 - f 78 -11.9 -3.73647 | overlap 6928243 TCCACGGACTAATAA CGCCCACCGCGGCAT CGA ATGCCGCGGCGTGAA ATGTAGAAATGCATG TERM 4610 6928273 - 6928243 - f 70 -13.2 -2.83867 | overlap 6928242 CCACGGACTAATAAC GCCCACCGCGGCAT CGA ATGCCGCGGCGTGA AATGTAGAAATGCAT BRADO6670 6928394 - 6930532 + | putative methyl-accepting chemotaxis receptor/sensory transducer BRADO6671 6930810 - 6931868 + | putative metallo-hydrolase/oxidoreductase superfamily protein; Beta-lactamase-like hemA 6932074 - 6933303 + | 5-aminolevulinate synthase BRADO6673 6933801 - 6937322 + | putative two-component hybrid sensor histidine kinase and response regulator BRADO6674 6938134 - 6937325 - | AraC/XylS family transcription factor TERM 4611 6937424 - 6937388 - G 71 -12.2 -3.31248 | gap 1, opp_overlap 6937392 GAACACCCGCGAGAA CGCCGCGGCGC-TGTCG TAGC CGACCTGCGACGCGACG CTCTTGACCGGCCTG BRADO6675 6938223 - 6938771 + | putative antioxydant protein BRADO6676 6939745 - 6938834 - | LysR family transcriptional regulator TERM 4612 6939434 - 6939471 + g 80 -13.9 -3.73224 | GATGCGGCCATGCGA GAGCGCGGCGCTGACGC GGAT GCGCCCGCGCGGCGCGC TTTGGTCGGCGATCG BRADO6677 6939847 - 6940809 + | putative hydrolase TERM 4613 6940854 - 6940803 - f 71 -11.5 -3.53444 | gap 2, overlap 6940837 GCAGCCTGCCGCAAA GCCGTGATCCGCTG-ACC-GTCAGC GGGA GCAGACAGGGGCAGCGGCGCACGGC GGAGCCCCGCATGGG BRADO6678 6940865 - 6941356 + | hypothetical protein TERM 4614 6941403 - 6941434 + T 95 -21 -3.25223 | gap 1 AGCGCGCCAACCGTG CAGGACGGGTTCGGC GAG GCCGAACCCG-CCTG TTCGTCGTGTGGATC BRADO6679 6943463 - 6941466 - | putative transglutaminase-like enzyme, putative cysteine protease TERM 4615 6942764 - 6942812 + g 80 -9.3 -4.18018 | opp_overlap 6942763 6942762, overlap 6942766 6942768 6942796 GGCTGAGCTGAAAGG CAGGGCCCTGGACCACCCACGGC GGC GTCATGGGTGGGCTCGGGCTGCG TTTTGGCTGGGCCCG TERM 4616 6942768 - 6942808 + g 75 -15.3 -2.76404 | opp_overlap 6942763 6942762, overlap 6942766 6942764 6942796 GAGCTGAAAGGCAGG GCCCTGGACCACCCACGGC GGC GTCATGGGTGGGCTCGGGC TGCGTTTTGGCTGGG BRADO6680 6945178 - 6944393 - | two-component LuxR family transcriptional regulator BRADO6681 6945432 - 6947102 + | MFS family sugar transporter TERM 4617 6947145 - 6947183 + T 100 -21.1 -3.53091 | gap 1, opp_overlap 6947153, overlap 6947148 CGCTCGCATCCACCT CGAGCGAACGGCCGCGGA TCAC TCCGCGGCCGTTCGG-CG TTTCAAGCCAGAGGT TERM 4618 6947148 - 6947182 + T 100 -22.3 -2.71712 | gap 1, opp_overlap 6947153, overlap 6947145 TCGCATCCACCTCGA G-CGAACGGCCGCGGA TCAC TCCGCGGCCGTTCGGC GTTTCAAGCCAGAGG TERM 4619 6947176 - 6947153 - T 93 -19.6 -3.06183 | opp_overlap 6947148 6947145 TCCACCTCGAGCGAA CGGCCGCGGA TCAC TCCGCGGCCG TTCGGCGTTTCAAGC BRADO6682 6947683 - 6947216 - | putative cell division protein BRADO6683 6948292 - 6947708 - | hypothetical protein BRADO6684 6949018 - 6948395 - | putative DSBA oxidoreductase/dithiol-disulfide isomerase involved in polyketide biosynthesis atpI 6949315 - 6949692 + | ATP synthase subunit A' (protein I), membrane bound, F0 sector atpB 6949781 - 6950524 + | F0F1 ATP synthase subunit A atpE 6950562 - 6950789 + | F0F1 ATP synthase subunit C TERM 4620 6951192 - 6951165 - g 71 -12.6 -3.30771 | CGAGACCCGCGACAA GCTCGCGGCCTC CTCG GAGGCCGAGCGC AAGGCGCTGGAAGAC atpB' 6950818 - 6951393 + | ATP synthase subunit B', membrane-bound, F0 sector atpF 6951390 - 6951884 + | ATP synthase subunit B, membrane-bound, F0 sector TERM 4621 6951911 - 6951943 + T 100 -19.2 -4.07687 | opp_overlap 6951917, overlap 6951912 TCGATACAAGATCTT CCGAAAGGCCGGCG CCAAA CGCCGGCCTTTCGC TTTTCCCACCGCGCT TERM 4622 6951912 - 6951942 + T 100 -22.7 -3.04398 | opp_overlap 6951917, overlap 6951911 CGATACAAGATCTTC CGAAAGGCCGGCG CCAAA CGCCGGCCTTTCG CTTTTCCCACCGCGC TERM 4623 6951937 - 6951917 - T 91 -16.1 -3.55548 | opp_overlap 6951912 6951911 CAAGATCTTCCGAAA GGCCGGCGC CAA ACGCCGGCC TTTCGCTTTTCCCAC BRADO6690 6952599 - 6951988 - | hypothetical protein TERM 4624 6952447 - 6952480 + g 77 -13.7 -3.48684 | opp_overlap 6952442, overlap 6952457 6952476 GGTCAACCCATCGGT CGGGTCGGCCGGCGG TCCG CCGCTGGCCGGCAGG TTCTCCTGCTTGTCG BRADO6691 6953392 - 6952805 - | putative ribosomal-protein-alanine N-acetyltransferase (rimJ-like) BRADO6692 6954777 - 6953488 - | putative zinc protease (mpp-like) thrC 6956192 - 6954777 - | threonine synthase BRADO6695 6957771 - 6958106 + | hypothetical protein BRADO6696 6958103 - 6958330 + | hypothetical protein BRADO6697 6959065 - 6958733 - | carboxymuconolactone decarboxylase BRADO6698 6959570 - 6959091 - | MerR family transcriptional regulator BRADO6699 6960485 - 6959724 - | putative surfeit 1 protein BRADO6700 6961080 - 6960691 - | hypothetical protein TERM 4625 6961029 - 6960996 - G 85 -13.1 -4.09739 | gap 1 GGAAGCCCTCGAAAA GCTTGCC-CTGGCCGC AGC GCGGGCAGCGGCAGGC GAGACCGCGCAGGAT BRADO6701 6961151 - 6961077 - | hypothetical protein TERM 4626 6961232 - 6961213 - R 100 -16.4 -4.05446 | CCGCTCAACGAGAAA GGGCGGCC CGAC GGCCGCCC TCGATGACACGTTCG coxC 6962128 - 6961271 - | cytochrome c oxidase, subunit III coxG 6962872 - 6962213 - | cytochrome C oxidase assembly protein coxF 6963058 - 6962882 - | protein CoxF coxE 6964019 - 6963081 - | protoheme IX farnesyltransferase TERM 4627 6964111 - 6964082 - R 77 -14.9 -2.87211 | ACGTCGCTTCAGAGA TCCAGCCGGCGCG CGGG CGCACCGGCCGGC AGATGGCAATGCGGC coxA 6965775 - 6964162 - | cytochrome c oxidase, subunit I coxB 6966684 - 6965845 - | cytochrome c oxidase, subunit II BRADO6710 6967161 - 6967787 + | putative invasion protein B BRADO6711 6968339 - 6967839 - | putative acetyltransferase TERM 4628 6969459 - 6969428 - g 72 -13.6 -3.14132 | overlap 6969413 6969430 CGCGCGCCTGATGAA CATGGCGCCGACCG GCAA CGGCCGCCGCCAGG GCTATGCGCATGTGC TERM 4629 6969457 - 6969430 - g 76 -14.8 -3.13403 | overlap 6969413 6969428 CGCGCCTGATGAACA TGGCGCCGACCG GCAA CGGCCGCCGCCA GGGCTATGCGCATGT tldD 6968424 - 6969848 + | putative peptidase TldD lepB1 6969845 - 6970636 + | signal peptidase I BRADO6714 6970802 - 6971371 + | hypothetical protein TERM 4630 6971397 - 6971450 + T 100 -14.5 -4.17958 | gap 1, opp_overlap 6971446 TCGCAACAGCTCTCT CCAGTCGTCATTCCGGGGC-GCGCGT AGC GCGAGCCGCCCCGGAATGACAGCGAG TTTGTTGCGACTGTT BRADO6715 6972194 - 6971478 - | putative cytochrome c-type biogenesis protein; putative membrane protein BRADO6716 6972566 - 6972201 - | putative thioredoxin (H-type,TRX-H) BRADO6717 6973374 - 6972736 - | hypothetical protein TERM 4631 6973532 - 6973516 - R 83 -7.9 -4.56961 | overlap 6973521 AACAGCCAGACAAAA GGCAACG GCC CGTGGCC GCCAAAACGGACCCA gshA 6975041 - 6973671 - | gamma-glutamylcysteine synthetase (glutamate--cysteine ligase) TERM 4632 6974044 - 6974028 - G 70 -11.5 -3.35996 | overlap 6974029 CAGGCCGACCCAGAA CGCCGGC AAC GCCGGCA GCCGGCCCCACGGCA TERM 4633 6974432 - 6974454 + g 70 -10.4 -3.64487 | CGGTGGCGATCGGCT GCAGCGCGAC GGA GACGCGCAGC TTCTTGACCATGTCG BRADO6719 6975626 - 6975138 - | MarR family transcriptional regulator gst 6975787 - 6976401 + | glutathione S-transferase BRADO6721 6976923 - 6976627 - | hypothetical protein BRADO6722 6977136 - 6976930 - | hypothetical protein TERM 4634 6977238 - 6977201 - R 100 -23.5 -3.06302 | overlap 6977179 6977216 ACCAGGGTGACGGAA GCGAGCTCCCGGAAAGC CGGA GCGTTCCGGGAGCCCGC TAACGTGGTGAACCT TERM 4635 6977263 - 6977292 + r 75 -12.1 -3.60792 | opp_overlap 6977256 GAACCTAAGCCGCCG CCTTCTTCGGCGG GAAG CGGCCGTAGAAGG TTTCGCCCTTGGCGG BRADO6723 6979465 - 6977252 - | putative bifunctional anaerobic fatty acid oxidation complex protein (fadJ/fadB-like): enoyl-CoA hydratase/epimerase/isomerase (N-terminal); 3-hydroxyacyl-CoA dehydrogenase (C-terminal) TERM 4636 6979641 - 6979683 + r 78 -14.3 -3.06183 | gap 1, opp_overlap 6979638 6979642 6979646 6979650, overlap 6979646 6979650 GCGAGGAGCGAAGCG ACGAAGCAATCCAGGG-CTC GGGT GGGACTCTGGATTGCTTCGC TTCGCTCGCAATGAC TERM 4637 6979682 - 6979642 - R 74 -14.8 -2.55544 | opp_overlap 6979641 6979646 6979650, overlap 6979638 6979646 6979650 CGAGGAGCGAAGCGA CGAAGCAATCCAGGGCTC GGGTG GGACTCTGGATTGCTTCG CTTCGCTCGCAATGA BRADO6724 6980912 - 6979704 - | acetyl-CoA acetyltransferase TERM 4638 6980741 - 6980781 + g 75 -11.7 -3.66732 | overlap 6980744 CGCCGACGGGATCGA CGACGCCGAGCACGACGTC ATC GACGGCGTCCTCGGGGATG TTGTTGCGGTCCTTG TERM 4639 6980983 - 6980961 - R 100 -18.4 -3.92373 | opp_overlap 6980958 6980954 TACGTGAGCGACAAA GCCGGCGCGC ATC GCGCACCGGC TCATCGTCTGATCCT BRADO6725 6982788 - 6980998 - | putative acyl-CoA dehydrogenase TERM 4640 6981876 - 6981910 + g 84 -17 -3.21099 | CGACCTCGGACTGCG CGAGCCCCTGCACGGC GAC GCCGAGCCGGGCCTCG TTCATCATCACGAAC BRADO6726 6983327 - 6982929 - | hypothetical protein TERM 4641 6983376 - 6983405 + H 77 -15.1 -2.62616 | opp_overlap 6983369 6983366 CACAACCACCCCATA TGCACATTGACGC ATAT GCGCCAATGTGCA TAATGTCAAGCGTGG BRADO6727 6983465 - 6984052 + | PadR family transcriptional regulator BRADO6728 6984245 - 6987730 + | hypothetical protein BRADO6729 6988077 - 6988904 + | hypothetical protein BRADO6730 6988972 - 6989967 + | putative permease; putative membrane protein BRADO6731 6989964 - 6990740 + | hypothetical protein BRADO6732 6991659 - 6990742 - | DMT family permease BRADO6733 6991759 - 6992625 + | LysR family transcriptional regulator BRADO6734 6993435 - 6992749 - | putative ICC-like phosphoesterase BRADO6735 6996083 - 6993456 - | putative ATP dependent DNA helicase BRADO6736 6997419 - 6996190 - | putative amino-acid ABC transport system, periplasmic binding protein BRADO6737 6998455 - 6997529 - | putative SAM-dependent methyltransferases TERM 4642 6999333 - 6999288 - g 83 -14.6 -3.62522 | GAAGGGCGTCAAGAA GGCCGAGCTCGCCGGCACCA TTACCT TGGCCCCGCCGAGCGCGACC TCCGACCTGTGGACG BRADO6738 6998599 - 6999645 + | putative metallo-hydrolase/oxidoreductase TERM 4643 7000559 - 7000616 + G 86 -17.8 -3.01712 | gap 2, overlap 7000561 7000571 ATGGAAATGGGACGG CATCCGCGT-GCAG-GCGGTCAGCGGCC GCGA GGCCGATGGCCGCATTGTGACGCGGCTG TATTCGCGCAGCGGC TERM 4644 7000561 - 7000614 + G 74 -14.6 -3.06696 | gap 2, overlap 7000559 7000571 GGAAATGGGACGGCA TCCGCGT-GCAG-GCGGTCAGCGGCC GCGA GGCCGATGGCCGCATTGTGACGCGGC TGTATTCGCGCAGCG TERM 4645 7000571 - 7000602 + G 73 -13.6 -3.29263 | overlap 7000561 7000559 CGGCATCCGCGTGCA GGCGGTCAGCGGCC GCGA GGCCGATGGCCGCA TTGTGACGCGGCTGT BRADO6739 6999642 - 7001510 + | ATP-dependent DNA ligase BRADO6740 7001763 - 7002071 + | hypothetical protein TERM 4646 7002173 - 7002140 - f 71 -11.1 -3.42503 | gap 2, opp_overlap 7002145, overlap 7002143 GCTGAAGACGGATAA GCATGGGCCGTGCCG GACTTT CGGCACGGCC-A-GC GAGACGTCCGTTGCA TERM 4647 7002171 - 7002143 - f 70 -12.5 -2.86426 | gap 1, opp_overlap 7002145, overlap 7002140 GAAGACGGATAAGCA TGGGCCGTGCCG GACTTT CGGCACGGCC-A GCGAGACGTCCGTTG TERM 4648 7002552 - 7002588 + G 70 -11.4 -3.36515 | gap 1, overlap 7002551 CATCTTCGAGCTGAT GGGCGGCAGCGACGCCG TTCT CGGCGCCGC-GCGGACC TATTTCAAGGTGCGG matE1 7002229 - 7003512 + | cation efflux pump, DNA-damage-inducible protein; putative pyrD 7004898 - 7003804 - | dihydroorotate dehydrogenase 2 TERM 4649 7004638 - 7004604 - G 72 -14.2 -3.04144 | GCTCCAGCCGGAACA GCCGCGGCCGCGGA TTGCCGC TCTGCGGACGCGGC GTGACCGAGCCGATC BRADO6743 7005239 - 7004895 - | hypothetical protein TERM 4650 7005185 - 7005220 + g 70 -3.8 -4.54477 | gap 1, opp_overlap 7005179, overlap 7005186 CGCGATAGACGCCCT GCCGCTCCGCCTCGCGC CAG GC-CGAAGCTGAGCAGA TTTTGTAGATTTTGG TERM 4651 7005438 - 7005427 - H 74 -5.8 -4.47217 | AAGGATTAACCAAAA CAGG GTTC CCTG GTTCCCGCGATTCGC acaP 7005519 - 7006280 + | carbonic anhydrase (carbonate dehydratase) lysK 7008120 - 7006474 - | lysyl-tRNA synthetase TERM 4652 7008181 - 7008214 + r 76 -13.9 -3.18582 | opp_overlap 7008181 7008176, overlap 7008185 CGCGAGCGAAGCGAA GCGATCCAGAGTCTC ACGC GCGGCTCTGGATTGC TTCGTCGCTCCGCTC BRADO6746 7009193 - 7008303 - | putative ABC transporter, periplasmic amino acid-binding protein BRADO6747 7009890 - 7009297 - | putative electron transport protein (SCO1/SenC/PrrC-like) BRADO6748 7010095 - 7009910 - | hypothetical protein BRADO6749 7010788 - 7010264 - | hypothetical protein BRADO6751 7011689 - 7011330 - | hypothetical protein BRADO6752 7011781 - 7012371 + | putative long-chain-fatty-acid--CoA ligase (fragment) TERM 4653 7012371 - 7012422 + F 89 -12.8 -4.11216 | gap 1, opp_overlap 7012382 7012385, overlap 7012372 ACACGCGACGCCGTA GGGTGGGCAAAGAGGCGCACGTGGC AAC GCCGCGGGCGCATCG-TGCCCCCCG TTTTCCCGGTCGCAA TERM 4654 7012372 - 7012421 + F 84 -16.3 -3.06515 | gap 1, opp_overlap 7012382 7012385, overlap 7012371 CACGCGACGCCGTAG GGTGGGCAAAGAGGCGCACGTGGC AAC GCCGCGGGCGCATCG-TGCCCCCC GTTTTCCCGGTCGCA TERM 4655 7012412 - 7012382 - f 75 -12.4 -3.53811 | opp_overlap 7012372 7012371, overlap 7012385 CGTAGGGTGGGCAAA GAGGCGCACGTGGC AAC GCCGCGGGCGCATC GTGCCCCCCGTTTTC TERM 4656 7012448 - 7012467 + F 70 -10.6 -3.53811 | overlap 7012447 7012449 CGCAACGGTGGGCAC GCGCCGCC TTGC GGCGTCGC TTTGCCCACCCTACG TERM 4657 7012514 - 7012533 + F 77 -2.2 -5.02074 | GATCGACGACTTCCG TGAAAAAT AAAT ATCTTTCA TTTTTTCGGAAATCA BRADO6755 7013528 - 7014484 + | LacI family transcriptional regulator BRADO6756 7014608 - 7016110 + | putative sugar ABC transporter, ATP-binding protein TERM 4658 7016136 - 7016116 - f 71 -5.3 -4.41348 | overlap 7016072 7016112 7016117 GGCCGCGTAAACAAA GTCGGAGCG GGC CGCTCAGAG CTCGCCGGGAGGAAC BRADO6757 7016155 - 7017213 + | putative sugar ABC transporter, permease protein TERM 4659 7017555 - 7017512 - g 87 -14.5 -3.7732 | CTCCGACATGAAGAA TGGCGGCGTCCTCGGCGTC ACCAAG GGCATCGAGGAGGCCGCCA AGGCCGCCGGCTGGA TERM 4660 7017740 - 7017777 + G 72 -14.1 -3.02144 | gap 1 GATGGTGTCGTGGCA TGC-GGCGCCCGTGATCG GAC CGGTCGCGGACGCCGGCG TGTTCGCCAACGTGA TERM 4661 7017986 - 7017936 - g 70 -13.4 -3.07291 | overlap 7017924 AAGGAGGTCATCGAA GGCCTCGGCG-GCAAGGTGCTCGA ATGGG TCGA-CACCCCGATCGCCGAGACC TCGACGCGCATGCCG BRADO6758 7017309 - 7018409 + | putative sugar ABC transporter, substrate-binding protein TERM 4662 7018544 - 7018587 + F 78 -14.6 -3.06183 | opp_overlap 7018516 7018549, overlap 7018553 GTCATTGCGAGCGTA GCGAAGCAATCCAGGGTGGC GGGC GGGACTCTGGATTGCTCCGC TTCGCTCGCAATGAC BRADO6759 7018893 - 7019237 + | hypothetical protein BRADO6760 7019265 - 7020167 + | putative gluconolactonase (gnl) TERM 4663 7020196 - 7020219 + T 75 -13.8 -3.08679 | opp_overlap 7020192 7020178 ACGCGACACGATCAT TCGGGCGGCG TTCG CGCCGCCCAA TATTCCATCAGCGCG garR 7021073 - 7020192 - | tartronate semialdehyde reductase (TSAR) (2-hydroxy-3-oxopropionate reductase) idnO 7021874 - 7021119 - | gluconate 5-dehydrogenase BRADO6763 7022349 - 7022747 + | hypothetical protein ogt2 7022931 - 7023503 + | O-6-methylguanine-DNA methyltransferase BRADO6765 7023575 - 7024417 + | AraC family transcriptional regulator BRADO6766 7024453 - 7024812 + | putative dioxygenase BRADO6767 7024822 - 7025220 + | hypothetical protein BRADO6768 7026690 - 7025242 - | putative cation-driven multidrug efflux pump; putative membrane protein TERM 4664 7026708 - 7026726 + r 71 -8.8 -3.90843 | overlap 7026700 7026723 TCGCTCCCCGCGTAC GCCGCG CTCGCGT CGCGGC TTCTTGTCGTTCGTT dcd 7027949 - 7026816 - | 2'-deoxycytidine 5'-triphosphate deaminase TERM 4665 7028117 - 7028144 + H 100 -8.5 -5.67967 | gap 2, opp_overlap 7028097 7028095 GGGACGATTGTGATC CCGGCCGTGAGGA GTTT TCC-CA-GGCCGG TTTTTTTGTGCTCAT metZ 7028193 - 7029431 + | O-succinylhomoserine sulfhydrylase BRADO6771 7030654 - 7029509 - | putative esterase/acetylhydrolase; putative secreted protein BRADO6772 7031427 - 7030669 - | hypothetical protein BRADO6773 7032716 - 7031427 - | hypothetical protein TERM 4666 7032112 - 7032085 - G 70 -9.8 -3.66356 | AGCCCCAAGGTGAAA TCCGGGCGCCAA CGCA TCAGCGCCAGGA TCAGCGGCAGGAACA TERM 4667 7032810 - 7032824 + H 78 -7 -4.58395 | overlap 7032812 TGAAGGACTTATCCG CGGGGC CGT GCCCAG TTTTTCGGCCCTCGC apaG 7033048 - 7033440 + | ApaG TERM 4668 7034027 - 7034059 + T 74 -14.2 -2.62983 | gap 1, opp_overlap 7034028 7034037 CTGTCTGGCCACCAT ACCGCGACAATGCGC TGAA GCGCATTG-CGCGGG TGATATCAGCATCGG TERM 4669 7034058 - 7034028 - T 86 -17.7 -2.78384 | gap 1, opp_overlap 7034027, overlap 7034037 TGTCTGGCCACCATA CCGCGACAATGCGC TGAA GCGCATTG-CGCGG GTGATATCAGCATCG TERM 4670 7034537 - 7034511 - T 75 -13.7 -3.10354 | opp_overlap 7034510 TAGATCGAGCGAAGA TGCCCTCTCCC GCAAG GGGAGAGGGCG CTGTATCCAACAGCG TERM 4671 7034608 - 7034584 - T 70 -12.2 -3.21276 | opp_overlap 7034584 7034581, overlap 7034587 CGGTCCGTGACAACA GAACTGAGCG CAGCT CGCTCAGCTC TCAATTCTCGGTCAC TERM 4672 7034605 - 7034587 - T 74 -10.3 -3.7511 | opp_overlap 7034584 7034581, overlap 7034584 TCCGTGACAACAGAA CTGAGCG CAGCT CGCTCAG CTCTCAATTCTCGGT hslO 7035616 - 7034609 - | Hsp33-like chaperonin TERM 4673 7035355 - 7035329 - G 74 -2.3 -4.77036 | overlap 7035330 7035332 GTCGACCACCAAAAA CGAGACG-GGACC GTC GGTCTGCGTCT-G CAGGATGAAGCGGCC BRADO6777 7035727 - 7036116 + | putative restriction endonuclease-like TERM 4674 7036176 - 7036126 - T 78 -14.2 -3.08464 | GCATGATCGAGCTAA GCTCGATCA-TGCCACCCTCTCCC CTTGT GGGAGAGGGTG-CAGCGAGCAAGC CGGGCGAAATTGGAC TERM 4675 7036412 - 7036384 - T 85 -14.6 -3.64703 | opp_overlap 7036378, overlap 7036385 7036387 TGCTGCGCATGGAAA CCACCCTCTCCC ACAAG GGGAGAGGGTGC ACCGATTGCTGGGCT TERM 4676 7036411 - 7036385 - T 86 -18.1 -2.78679 | opp_overlap 7036378, overlap 7036384 7036387 GCTGCGCATGGAAAC CACCCTCTCCC ACAAG GGGAGAGGGTG CACCGATTGCTGGGC TERM 4677 7036409 - 7036387 - T 77 -14.9 -2.94144 | opp_overlap 7036378, overlap 7036385 7036384 TGCGCATGGAAACCA CCCTCTCCC ACAAG GGGAGAGGG TGCACCGATTGCTGG argF 7037389 - 7036463 - | ornithine carbamoyltransferase argD 7038609 - 7037398 - | bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein TERM 4678 7038719 - 7038695 - H 100 -14.3 -5.07652 | opp_overlap 7038690, overlap 7038696 CCCTGGAAAACAAAA TGTGCCGCCTT TTC AAGGCGGCACG TGCACCTATTGTATG TERM 4679 7038718 - 7038696 - H 100 -17.8 -3.63868 | opp_overlap 7038690, overlap 7038695 CCTGGAAAACAAAAT GTGCCGCCTT TTC AAGGCGGCAC GTGCACCTATTGTAT BRADO6781 7039093 - 7039602 + | hypothetical protein TERM 4680 7039634 - 7039665 + T 80 -16.6 -2.6294 | opp_overlap 7039640, overlap 7039640 CAACTAACAACTGAC GAGAAAGGCCCGGC CCGC GCCGGGCCTTTTGC ATTCTGGATCATGTC TERM 4681 7039659 - 7039640 - T 100 -16.4 -3.99806 | opp_overlap 7039634 7039640 ACAACTGACGAGAAA GGCCCGGC CCGC GCCGGGCC TTTTGCATTCTGGAT TERM 4682 7039640 - 7039659 + T 100 -16.4 -4.32482 | opp_overlap 7039640, overlap 7039634 ACAACTGACGAGAAA GGCCCGGC CCGC GCCGGGCC TTTTGCATTCTGGAT phoR 7040986 - 7039679 - | two component sensor histidine kinase; phosphate regulon BRADO6783 7042070 - 7041015 - | hypothetical protein BRADO6784 7042777 - 7042472 - | putative signal peptide BRADO6785 7044176 - 7042782 - | putative outer membrane protein (ompA-like) BRADO6786 7044343 - 7045401 + | putative polysaccharide deacetylase TERM 4683 7045944 - 7045908 - g 72 -13.5 -3.14132 | GTTCTTCCTGACCAA GGCGCTGGCGGCGCCGC TGC GCGCGGCTGCGAGCGCC GAGCGGCCGTCCAAG TERM 4684 7046191 - 7046133 - g 100 -22.4 -3.26947 | gap 1, opp_overlap 7046166, overlap 7046136 7046137 CAAGTCCGACATGAA CAAGGCGGCCCGCGACCACGC-CGACG AGGTCG CGACGCGCGTGCCCGCGGGCCGCATCG GCACCGACGAGGACA TERM 4685 7046188 - 7046136 - g 100 -20.5 -3.7732 | gap 1, opp_overlap 7046166, overlap 7046133 7046137 GTCCGACATGAACAA GGCGGCCCGCGACCACGC-CGACG AGGTCG CGACGCGCGTGCCCGCGGGCCGCA TCGGCACCGACGAGG TERM 4686 7046187 - 7046137 - g 100 -24 -2.86071 | gap 1, opp_overlap 7046166, overlap 7046136 7046133 TCCGACATGAACAAG GCGGCCCGCGACCACGC-CGACG AGGTCG CGACGCGCGTGCCCGCGGGCCGC ATCGGCACCGACGAG BRADO6787 7045522 - 7046331 + | putative short-chain dehydrogenase/reductase (SDR) boxB 7047947 - 7046511 - | benzoyl-CoA oxygenase (BoxB) BRADO6789 7049752 - 7048082 - | enoyl-CoA hydratase BRADO6790 7050670 - 7049867 - | alpha/beta family hydrolase BRADO6791 7052333 - 7050810 - | putative AMP-dependent synthetase and ligase aroK 7052462 - 7053385 + | anaerobic benzoate catabolism transcriptional regulator BRADO6793 7053636 - 7053457 - | hypothetical protein TERM 4687 7053966 - 7053930 - R 72 -12.2 -3.32844 | gap 1, overlap 7053931 TCTTCGATGTCATAA CCCGC-GCGCGCGACGC GAGC GCGCCGCACGCGGCCGA CGTCAGCCCTGCGTC TERM 4688 7053965 - 7053931 - R 71 -13.5 -2.59564 | gap 1, overlap 7053930 CTTCGATGTCATAAC CCGC-GCGCGCGACGC GAGC GCGCCGCACGCGGCCG ACGTCAGCCCTGCGT BRADO6794 7054346 - 7053969 - | hypothetical protein BRADO6795 7055692 - 7054487 - | putative agmatine ureohydrolase BRADO6796 7056493 - 7055720 - | putative ABC transporter, ATP-binding protein BRADO6797 7057314 - 7056493 - | ABC transporter permease BRADO6798 7058590 - 7057520 - | putative ABC transporter, substrate-binding protein TERM 4689 7058543 - 7058517 - G 77 -13.6 -3.53012 | TTCTTCTCGGCGAAA GCGGGCGACAGC GAT GCGGTCGCCAGC GTCGAAGCTGCGAGC TERM 4690 7059082 - 7059060 - g 81 -14.8 -3.53012 | overlap 7059076 CGGCGCTCGCGCAAA CGGCGCCTCC AAC GGACGCGCCG GCCCAGCCCGCTCCC TERM 4691 7059237 - 7059223 - g 95 -3.4 -5.63236 | overlap 7059234 ACCGAAAAAGAAAAA GCGGAC GAA GACCAC GCGGCAGGAGGTCGA BRADO6800 7058954 - 7059340 + | putative signal peptide BRADO6801 7059521 - 7059369 - | transporter TERM 4692 7059574 - 7059553 - R 75 -3.7 -4.75954 | overlap 7059556 7059567 7059569 7059571 AAAAGGCAAAACAAA CTACTATCC TGAA AGATAGTCG CAGCTGAGCTGCGCC BRADO6802 7060410 - 7059706 - | branched chain amino acid ABC transporter ATP-binding protein TERM 4693 7059928 - 7059948 + g 77 -7.5 -4.30416 | overlap 7059930 CGCGAGCCCTTCTGT CGCCTCGTC GAG GATGAGGAG TTTTGGATTGGTCAT BRADO6803 7061212 - 7060442 - | branched chain amino acid ABC transporter ATP-binding protein TERM 4694 7060807 - 7060841 + g 74 -12.7 -3.50853 | opp_overlap 7060777 7060782 GGCCGAGGCCGACGC GCTCCAGCGCGGCGC GCGCG GCGTCGCGCAGCGGC TTCTCCTTGCGCGCA BRADO6804 7062152 - 7061205 - | putative branched-chain amino acid ABC transporter, permease protein BRADO6805 7063075 - 7062149 - | putative branched-chain amino acid ABC transporter, permease protein TERM 4695 7063125 - 7063090 - R 86 -8.9 -4.59773 | opp_overlap 7063122, overlap 7063092 7063093 CTTCACGCTCAAAAA GACGGCGGCAGAACC ATCGCA GGCGCTGCCGCCATG TCCGTCCCGATCTTA TERM 4696 7063123 - 7063092 - R 79 -11.5 -3.91506 | opp_overlap 7063122, overlap 7063090 7063093 TCACGCTCAAAAAGA CGGCGGCAGAACC ATCGCA GGCGCTGCCGCCA TGTCCGTCCCGATCT TERM 4697 7063122 - 7063093 - R 70 -12.8 -2.94422 | overlap 7063092 7063090 CACGCTCAAAAAGAC GGCGGCAGAACC ATCGCA GGCGCTGCCGCC ATGTCCGTCCCGATC TERM 4698 7063169 - 7063198 + r 81 -7.7 -4.431 | opp_overlap 7063170 7063171, overlap 7063158 7063170 7063171 TTAAGCTTCAAGCAA ATTCCAGGCCGGT CGAG GCCGGCCGGGAGA TTTTCTCGATCGCTA TERM 4699 7063197 - 7063170 - R 71 -8.3 -3.91798 | opp_overlap 7063169 7063158 7063170 7063171, overlap 7063171 TAAGCTTCAAGCAAA TTCCAGGCCGG TCGAGG CCGGCCGGGAG ATTTTCTCGATCGCT BRADO6806 7064383 - 7063211 - | branched chain amino-acid ABC transporter substrate-binding protein BRADO6807 7064676 - 7064978 + | hypothetical protein TERM 4700 7065020 - 7064994 - T 79 -15.1 -2.85351 | opp_overlap 7064984 7065009 GTCCTGCACACGACA CCGACCGCGAC AGTTG GCCGCGGCCGG GGCTGCTGGGCCTTT TERM 4701 7065009 - 7065032 + T 76 -6.6 -4.4715 | gap 1, opp_overlap 7064994, overlap 7064984 CCGACCGCGACAGTT GGCCGCGGCCG GGG CTGCTG-GGCC TTTTGTCACTTCACC BRADO6808 7066255 - 7065038 - | branched chain amino-acid ABC transporter substrate-binding protein fdxB 7066623 - 7066300 - | 2Fe-2S ferredoxin (FdII) BRADO6810 7067864 - 7066644 - | putative cytochrome P450 BRADO6811 7067942 - 7068460 + | MarR/EmrR family transcriptional regulator BRADO6812 7068811 - 7069350 + | signal peptide BRADO6813 7069466 - 7070740 + | putative NADH dehydrogenase FAD-containing subunit transmembrane protein TERM 4702 7071387 - 7071377 - g 70 -2.4 -4.59773 | overlap 7071379 TGGCATTCCGAAAAA CCCG GTG CGCG GCGATCTGGTGCCGG BRADO6814 7070958 - 7072760 + | amidase BRADO6815 7074264 - 7072906 - | putative transposase TERM 4703 7073455 - 7073499 + g 79 -4.8 -4.73388 | overlap 7073467 CCGCGCCTGCGGATC GGTGGTGGAGGCCCGAGGCT CCTTC GGCTTCTTGCCGTTACCGCC TTTTTCCTCGAGCTT TERM 4704 7074366 - 7074338 - R 70 -10.2 -3.53811 | gap 1, overlap 7074314 7074339 CGTAGGGTGGCCAAA GCGGC-CGCCGCC AGGT GGCAGCGTGCCGA CCGTCGGGCAGCGTG TERM 4705 7074365 - 7074339 - R 72 -13.7 -2.72144 | gap 1, overlap 7074314 7074338 GTAGGGTGGCCAAAG CGGC-CGCCGCC AGGT GGCAGCGTGCCG ACCGTCGGGCAGCGT BRADO6816 7075156 - 7074482 - | GntR family transcriptional regulator TERM 4706 7075183 - 7075165 - R 70 -10.2 -3.55444 | GCGGCATCTCGGAAA CGCGAGCG ATC CGCTGGCG CGTGCGCGGCGGAAG BRADO6817 7075609 - 7075217 - | hypothetical protein BRADO6818 7077017 - 7075590 - | amidase TERM 4707 7076019 - 7075999 - G 73 -11.1 -3.72576 | GCGCCGGCGATCAAA CGATCGCGC ACC GCGGGATCG AAATCATCGGGACGC BRADO6819 7077192 - 7077001 - | hypothetical protein BRADO6820 7079032 - 7077206 - | putative dipeptide/oligopeptide/nickel ABC transporter, ATP-binding protein BRADO6821 7080109 - 7079210 - | putative dipeptide/oligopeptide/nickel ABC transporter, permease protein BRADO6822 7081119 - 7080106 - | putative dipeptide/oligopeptide/nickel ABC transporter, permease protein TERM 4708 7081255 - 7081205 - R 70 -13.3 -2.87564 | overlap 7081220 GGAGGGTTGGAGAGA GGAGTGAGCCGAGAAGGTGGT-GCC TGT GGCTACCCCCCTCCCTGCCC-CTCC CCCACAAGGGTGGAG BRADO6823 7082941 - 7081316 - | peptide/oligopeptide/nickel ABC transporter substrate-binding protein TERM 4709 7082177 - 7082134 - G 93 -10.8 -4.32177 | gap 1, overlap 7082135 GCAGCTCATAAGAAA TGTCGGCA-TCGCCGCGCTCC AGC AGCGCGCGGCGGTTGCCGGCC TGCGGCACCATGCGC TERM 4710 7082176 - 7082135 - G 73 -14.3 -3.18824 | gap 1, overlap 7082134 CAGCTCATAAGAAAT GTCGGCA-TCGCCGCGCTCC AGC AGCGCGCGGCGGTTGCCGGC CTGCGGCACCATGCG BRADO6824 7084554 - 7083133 - | hypothetical protein TERM 4711 7083543 - 7083496 - G 77 -9.8 -3.91716 | gap 1, overlap 7083497 7083499 CGAGTCGGGAAACAA CGAGGCCACAAGGT-CGAAGGCC GCG GGCGTTCGAACCTGGCGGGCTCT CGCCAACACCTCGGC TERM 4712 7083542 - 7083497 - G 70 -13.3 -2.94708 | gap 1, overlap 7083496 7083499 GAGTCGGGAAACAAC GAGGCCACAAGGT-CGAAGGCC GCG GGCGTTCGAACCTGGCGGGCTC TCGCCAACACCTCGG TERM 4713 7084426 - 7084445 + g 75 -7 -4.3467 | opp_overlap 7084418 GACGAGAGCCACGCG CGGCGCCG AGCT CGGTACCG TTTTCCTCTGAGCGT BRADO6825 7084693 - 7085223 + | hypothetical protein BRADO6826 7085305 - 7085712 + | hypothetical protein BRADO6827 7085852 - 7086256 + | hypothetical protein TERM 4714 7086387 - 7086418 + G 81 -16.6 -3.14132 | gap 1, overlap 7086414 GCAGGCATGGCTGCC GCCGCAATGTCCGCC AAT GGCGGAC-TCGCGGC TTGCTCCGCCAACAC BRADO6828 7086279 - 7086749 + | hypothetical protein BRADO6829 7087590 - 7086760 - | putative phosphotransferase BRADO6830 7089059 - 7087713 - | sugar ABC transporter substrate-binding protein TERM 4715 7089085 - 7089069 - H 78 -5.1 -4.81082 | overlap 7089071 AATCAATCAATAAAA TCTCGCC GTG GACGAAA ATCGCCATCGGGCGA TERM 4716 7089100 - 7089087 - H 79 -8.1 -4.25104 | CGCCGTGGACGAAAA TCGCC ATCG GGCGA ACTCTAGAGTTCGAC TERM 4717 7089329 - 7089378 + H 70 -10.5 -3.64703 | gap 1 CGCAGGCTGCGGCGG GCGCGTGGTCCCGTGCGCGCGGGC CTT GCCGCCCCGCA-GCGGCAACGCGC TTTGCATCGCAACAC TERM 4718 7090220 - 7090250 + GH 83 -12.4 -4.09685 | opp_overlap 7090190 7090193 CGCGCTGCAGCGGCT CTCGGCGCGCGCCG CCG CGCTACGCGCCGGG TTTTCCAAGCTGACG TERM 4719 7090425 - 7090402 - gH 77 -8 -4.37886 | opp_overlap 7090402 7090385, overlap 7090380 7090404 CGACCTTCGACAAAA CCCTGCGCGA CATC TCGCGCCGCG TGCTGTCGATTGCGG BRADO6831 7089609 - 7091543 + | putative sensor histidine kinase TERM 4720 7091615 - 7091593 - gf 72 -12 -3.27525 | overlap 7091588 GGCCCGGAAATGGAA GATCGCCGTC ATC GACGACGACC ATGCCGTACACGATG TERM 4721 7092125 - 7092165 + GF 74 -2.4 -4.74706 | gap 1, overlap 7092126 7092127 AACGTCGATTGCGCC GGCATTCTCGTGCTGCGCG ACGA CG-GCAGCCCGAGAGAGGA TTTTTCCGTATTGGC BRADO6832 7091513 - 7093258 + | two-component system regulator: response regulator receiver (N-terminal) and histidine kinase (C-terminal) BRADO6833 7093255 - 7094010 + | two-component system regulator, response regulator protein TERM 4722 7094246 - 7094229 - f 70 -9.8 -3.54424 | TCCCACCCGTCGAAA CGCCGC AAGGGG GCGGCG GAACGGGAGAGTGCC BRADO6834 7094262 - 7094873 + | RNA polymerase sigma factor TERM 4723 7095084 - 7095123 + F 100 -19.3 -4.07568 | opp_overlap 7095093, overlap 7095087 CCACCTTCCCTGTTG CTCCGAAGACCCGGCGG ATTCCC CCGCCGGGTCTTCGTCG TTTTGGGACCCGCGG TERM 4724 7095087 - 7095120 + F 100 -24 -3.08032 | opp_overlap 7095093, overlap 7095084 CCTTCCCTGTTGCTC CGAAGACCCGGCGG ATTCCC CCGCCGGGTCTTCG TCGTTTTGGGACCCG TERM 4725 7095114 - 7095093 - f 81 -15.1 -3.01712 | opp_overlap 7095087 7095084 CTGTTGCTCCGAAGA CCCGGCGGA TTCC CCCGCCGGG TCTTCGTCGTTTTGG BRADO6835 7095290 - 7096642 + | cytochrome bd ubiquinol oxidase, subunit I (cydA, QxtA) BRADO6836 7096639 - 7097649 + | cytochrome bd ubiquinol oxidase, subunit II (cydB, qxtB) BRADO6837 7097884 - 7098477 + | putative ErfK/YbiS/YcfS/YnhG aapJ 7098544 - 7099581 + | general L-amino acid-binding periplasmic protein BRADO6839 7100488 - 7100943 + | hypothetical protein TERM 4726 7100993 - 7100961 - T 81 -13.4 -3.67564 | opp_overlap 7100964, overlap 7100964 7100966 AAGCATTGACTGAAA CGAGAGCGCGCCGT TGATG ACGGCGCGCTCTTT GTTGGCGAGCTCTGA TERM 4727 7100964 - 7100990 + T 100 -20.2 -4.1552 | opp_overlap 7100961 7100964 7100966 CATTGACTGAAACGA GAGCGCGCCGTT GAT GACGGCGCGCTC TTTGTTGGCGAGCTC TERM 4728 7100990 - 7100964 - T 93 -19.5 -2.9462 | opp_overlap 7100964, overlap 7100961 7100966 CATTGACTGAAACGA GAGCGCGCCGT TGATG ACGGCGCGCTC TTTGTTGGCGAGCTC TERM 4729 7100988 - 7100966 - T 84 -16.3 -3.02324 | opp_overlap 7100964, overlap 7100964 7100961 TTGACTGAAACGAGA GCGCGCCGT TGATG ACGGCGCGC TCTTTGTTGGCGAGC BRADO6840 7102545 - 7101406 - | putative acyl-CoA dehydrogenase BRADO6841 7103891 - 7102692 - | putative acyl-CoA dehydrogenase TERM 4730 7102797 - 7102822 + g 77 -12.5 -3.66178 | overlap 7102789 7102786 CAGCCAGGCGCGCGG GCGGGCGCCCT CGCC AGAGCGCTCGC TTTCCCATTCCAGCG BRADO6842 7104052 - 7104597 + | hypothetical protein TERM 4731 7104827 - 7104798 - T 88 -14.4 -3.72695 | gap 1, overlap 7104799 7104802 7104816 ATGCTGCGCATGAAA GCCACCCTCTCCC ACAAG GGGAGAGGGTG-C ACCGCCCGAGTCGCT TERM 4732 7104827 - 7104799 - T 77 -14.6 -2.83403 | overlap 7104798 7104802 7104816 TGCTGCGCATGAAAG CCACCCTCTCCC ACAAG GGGAGAGGGTGC ACCGCCCGAGTCGCT TERM 4733 7104824 - 7104802 - T 74 -14.9 -2.67803 | overlap 7104798 7104799 7104816 TGCGCATGAAAGCCA CCCTCTCCC ACAAG GGGAGAGGG TGCACCGCCCGAGTC BRADO6843 7106107 - 7104893 - | major facilitator superfamily permease TERM 4734 7105906 - 7105853 - G 72 -13 -3.21099 | gap 2 GGTGCCGATCAGGAA GGCGGCGCGGCGGCCGTAGCGGCGCG AGAT CGCGCCGGT-CGGCAAC-GTGCCGGC GGCGAGCCCGACGAC TERM 4735 7106395 - 7106368 - g 75 -15.6 -2.78384 | opp_overlap 7106373, overlap 7106373 TGTGGCTCGAGGATA TCGAAGGCGAGC GCCC GCTCGCCTTCGT CGCGGCGCAGAATGA TERM 4736 7107656 - 7107674 + G 76 -16 -2.92091 | overlap 7107658 CGGCCCCGCGAAGCT CACCGGCG ATG CGCCGGTG TATATGAGTGCCTAT BRADO6844 7106301 - 7108367 + | putative prolyl oligopeptidase BRADO6845 7109246 - 7108569 - | hypothetical protein BRADO6846 7109447 - 7109740 + | putative cytochrome C; sulfur oxidation protein SoxX (fragment) BRADO6847 7109748 - 7110254 + | sulfur oxidation protein precursor SoxY BRADO6848 7110268 - 7110579 + | sulfur oxidation protein precursor soxZ BRADO6849 7110576 - 7111421 + | putative cytochrome C; sulfur oxidation protein precursor SoxA TERM 4737 7111507 - 7111477 - f 78 -5.2 -4.75404 | overlap 7111480 AAACGTCATGAAAAA GATCGCCTTCGCCA TGA TGGTGTCGGCGGTC TGCGCCGGCTCCGCG TERM 4738 7111511 - 7111543 + G 71 -14.2 -2.88249 | gap 2 GTGTCGGCGGTCTGC G-CCGGCTCCG-CGCG GGC CGCGTCGGAGTCGGAC TATCTCGCGGCTGTG BRADO6850 7111496 - 7111771 + | hypothetical protein BRADO6851 7111782 - 7113530 + | putative 5'-nucleotidase BRADO6852 7113632 - 7114672 + | bifunctional glyoxylase/rhodanese-like sulfurtransferase BRADO6853 7114798 - 7116399 + | putative glucose-methanol-choline (GMC) oxidoreductase; putative choline dehydrogenase (CHD) BRADO6854 7117515 - 7116427 - | hypothetical protein TERM 4739 7117225 - 7117205 - G 70 -8.2 -3.90744 | GTGCCGGTCAAATAA GCGGCCCG GAATG CGGACCAC GCGGCGGCGCCCTTC BRADO6856 7119099 - 7118086 - | putative substrate-binding protein of an ABC transporter TERM 4740 7118439 - 7118416 - G 71 -13.8 -2.87132 | GTTGCTGGTCATATA GGCGGCCGAG GCAG CCCAGCCGCC GACCACGGCCGCGCT TERM 4741 7120419 - 7120405 - g 75 -11.4 -3.75024 | TCTCATCACCAACAA CTGGCC GCC GGCCAG CGAGCGATATCGCCG BRADO6857 7119494 - 7120702 + | putative TRAP-type uncharacterized transport system, periplasmic component TERM 4742 7121125 - 7121092 - T 71 -9.5 -3.76952 | opp_overlap 7121101 GCCACCGAAGCCAAA GGTGGAGCAAGCTGG AGCT CCAGCGTGCTTGACC ACAGGCGTCGCGGAG BRADO6858 7122219 - 7121224 - | putative substrate-binding protein of an ABC transporter BRADO6859 7123068 - 7122244 - | ABC transporter ATP-binding protein TERM 4743 7122735 - 7122761 + g 72 -13 -3.21276 | overlap 7122733 CGGCCGGCACGCGAT TCGCTTTCAGGC GCA GCCCGAAGGCGA TGTTGTCGCGCACGG BRADO6860 7123808 - 7123065 - | permease BRADO6861 7124261 - 7125484 + | major facilitator superfamily permease TERM 4744 7125569 - 7125586 + F 81 -2.5 -5.1356 | opp_overlap 7125533 7125530 CTTCGCTCCGCCCAC CCGACGC AAGG GCTCCGG TTTTTGTTAGTCCGG TERM 4745 7125650 - 7125615 - f 70 -10.5 -3.55622 | gap 1, overlap 7125619 GGCAACGCTGTCAAA TGCAGCGCCCTCTCCC CTTGC GGGAGAGGGCA-TGTA GGACGTTTCAGCAAG BRADO6862 7125904 - 7127622 + | putative N-acyl-D-amino-acid deacylase family protein (D-aminoacylase) BRADO6863 7129138 - 7127825 - | major facilitator superfamily permease TERM 4746 7128969 - 7128935 - G 71 -9.3 -3.77553 | gap 1, overlap 7128932 7128936 7128938 GAACAGCAGGAAGAA CGACGAGCCGAGCAGC CCGA ACTGCTCGGCGC-TCA GATTGAGCTCGGTCA TERM 4747 7129068 - 7129054 - G 81 -3.5 -5.10033 | opp_overlap 7129066, overlap 7129055 7129059 TGAACAGAAACAAAA GGAAG GTGAT CCTCC ACGCGCCCTTCGGCG BRADO6864 7129482 - 7130054 + | ABC transporter ATP-binding protein TERM 4748 7131922 - 7131939 + G 85 -14.1 -4.07568 | GGTCACCGTGAACGT CGCCGCG CTGA CGCGGCG TTTTCCGGCGACGCC BRADO6865 7130051 - 7132513 + | ABC transporter permease BRADO6866 7132503 - 7133585 + | putative signal peptide BRADO6867 7133612 - 7134004 + | MAPEG family protein BRADO6868 7135360 - 7134173 - | branched chain amino acid ABC transporter substrate-binding protein TERM 4749 7136718 - 7136739 + G 71 -13.7 -2.90075 | gap 1 CACATGCAGCCTTGC CCG-GCCGGC ACC GCCGGCACGG TGTGGTTCAAGACCG BRADO6869 7135674 - 7137224 + | acyl-CoA synthetase BRADO6870 7137321 - 7138070 + | hypothetical protein BRADO6871 7138083 - 7138388 + | putative cytochrome c TERM 4750 7138444 - 7138460 + F 76 -9.3 -4.07885 | overlap 7138435 CTCTGAAGGCGGGCT GCGGCCG CAC CCGCCGC TTTTCGCGGCAGATC BRADO6873 7138704 - 7140086 + | two-component sensor histidine kinase BRADO6874 7140121 - 7140435 + | putative two component-response regulator receiver (CheY-like protein) BRADO6875 7142442 - 7140487 - | putative biotin carboxylase BRADO6876 7144085 - 7142469 - | putative carboxylase; putative substrate: acetyl-CoA, propionyl-CoA, methylcrotonoyl-CoA BRADO6877 7145083 - 7144217 - | hypothetical protein BRADO6878 7145997 - 7145161 - | AraC/XylS family transcription factor TERM 4751 7146074 - 7146090 + r 82 -5.8 -4.8543 | TTCGCGCCGCTGTCA TCGGCG ACGAC TGCCGA TTTTTGTCGCGGTTA TERM 4752 7146201 - 7146172 - R 74 -12.9 -3.33261 | gap 1, opp_overlap 7146156, overlap 7146156 CCGGAATCTCGAGAA TCCGGGTCTGGTCC TTC GGACCAT-CCCGGA ATGACGGCGCCGACG BRADO6879 7146874 - 7146218 - | putative glutathione S-transferase (GST) BRADO6880 7148043 - 7146874 - | putative acyl-CoA dehydrogenase TERM 4753 7148211 - 7148163 - R 100 -11.6 -4.4078 | gap 1 GCCCGCCAAGTAAAA GCCCTCGTCCTGAGGAGCCCGCC TCTT GGCGGGCGTCTC-GAAGGACGGC CGCATCGGGATCGTC BRADO6881 7149403 - 7148264 - | putative acyl-CoA dehydrogenase TERM 4754 7149624 - 7149579 - H 100 -14 -4.56775 | gap 2 ACTCGCGGCCAAAAA TGCC-GCGCGTTCC-GCCGCCC CGCC GGAAGGCCGGGACGCGCCGGCA AGAGACGGCAAGACA BRADO6882 7149689 - 7151239 + | putative O-succinylbenzoate--CoA ligase TERM 4755 7151349 - 7151364 + G 70 -11.8 -3.45054 | overlap 7151352 GACTCTGCTGTCTTT CGCGGC CGCC GCCGCG TTCTCCGTTCTGGCG BRADO6883 7151314 - 7152546 + | branched chain amino acid ABC transporter substrate-binding protein TERM 4756 7153513 - 7153487 - T 91 -17.2 -3.28712 | CGCCGTCCCGGACAA GCCGCGACGCGC AAC GCGCGGCACGGC GCCGATCCGAGACCC TERM 4757 7153674 - 7153724 + T 100 -18.4 -3.78953 | opp_overlap 7153682 7153686, overlap 7153678 TCCGTCATTGCGAGC GCAGCGAAGCAATCCAGGGGCG GAGTGCG CGACTCTGGATTGCTTCGTCGC TTTGCTCCTCGCAAT TERM 4758 7153678 - 7153720 + T 87 -18.6 -2.68775 | opp_overlap 7153682 7153686, overlap 7153674 TCATTGCGAGCGCAG CGAAGCAATCCAGGGGCG GAGTGCG CGACTCTGGATTGCTTCG TCGCTTTGCTCCTCG TERM 4759 7153831 - 7153773 - T 71 -8.7 -3.85389 | gap 2, opp_overlap 7153800, overlap 7153792 7153797 GCCCAACAATTCAAA CGGCCGTAGGGTGGGCAAAGCAGACGCCC GCA GGGCGGTTGCGT-GCCCACCATCTGGC-G GCACATTCGGAGCCA BRADO6886 7154702 - 7153929 - | hypothetical protein TERM 4760 7156330 - 7156351 + G 71 -12.3 -3.22774 | opp_overlap 7156323 CGAGACCATCACCGC GATGCGCGG CCGC TCGCGCATC TTCATGGTGGGTATC TERM 4761 7157078 - 7157113 + G 100 -19.2 -3.21416 | gap 1, opp_overlap 7157070 CCGAAGACGGCCACC GATGCCGA-GCTGAGCA TGC TGCTCGGCCTCGGCATC TTGCTACTCGAACTG BRADO6887 7154900 - 7157167 + | hypothetical protein TERM 4762 7157245 - 7157194 - f 88 -17.5 -3.09635 | gap 2, opp_overlap 7157197 7157202 7157206, overlap 7157198 7157202 7157206 ATTGCGAGGAGCGAA GCG-A-CGAAGCAATCCAGGGCTGC ACGC GCGCCCCTGGATTGCTTCGCTTCGC TCGCAATGACAGGAG TERM 4763 7157197 - 7157240 + F 93 -20.4 -3.06183 | opp_overlap 7157194 7157198 7157202 7157206, overlap 7157202 7157206 GCGAGGAGCGAAGCG ACGAAGCAATCCAGGGCTGC ACGC GCGCCCCTGGATTGCTTCGC TTCGCTCGCAATGAC TERM 4764 7157239 - 7157198 - f 100 -21.7 -2.55544 | opp_overlap 7157197 7157202 7157206, overlap 7157194 7157202 7157206 CGAGGAGCGAAGCGA CGAAGCAATCCAGGGCTGC ACGC GCGCCCCTGGATTGCTTCG CTTCGCTCGCAATGA TERM 4765 7157235 - 7157202 - f 83 -15.3 -3.22388 | opp_overlap 7157197 7157202 7157206, overlap 7157198 7157194 7157206 GAGCGAAGCGACGAA GCAATCCAGGGCTGC ACGC GCGCCCCTGGATTGC TTCGCTTCGCTCGCA TERM 4766 7157202 - 7157235 + F 89 -17.5 -3.19192 | opp_overlap 7157202 7157198 7157194 7157206, overlap 7157197 7157206 GAGCGAAGCGACGAA GCAATCCAGGGCTGC ACGC GCGCCCCTGGATTGC TTCGCTTCGCTCGCA TERM 4767 7157206 - 7157231 + F 71 -11.1 -3.40788 | opp_overlap 7157206 7157202 7157198 7157194, overlap 7157202 7157197 GAAGCGACGAAGCAA TCCAGGGCTGC ACGC GCGCCCCTGGA TTGCTTCGCTTCGCT BRADO6888 7157269 - 7157832 + | putative peptidase (sortase-like) BRADO6889 7157953 - 7158669 + | hypothetical protein BRADO6890 7158727 - 7159551 + | ABC transporter TERM 4768 7159596 - 7159629 + T 79 -13.7 -3.40163 | opp_overlap 7159614 GTGGCTGATCATCCA GGGCCGCGCCGTGGG AAAG CCCTTGGCGCCGCTC TTGGTCTTGGTCATC BRADO6891 7159919 - 7159578 - | putative formamidase regulatory protein FmdB fmdA 7161251 - 7160019 - | formamidase (formamide amidohydrolase) BRADO6893 7161974 - 7161285 - | branched chain amino acid ABC transporter ATP-binding protein BRADO6894 7162745 - 7161990 - | branched chain amino acid ABC transporter ATP-binding protein BRADO6895 7163892 - 7162756 - | branched chain amino acid ABC transporter permease BRADO6896 7164853 - 7163927 - | branched chain amino acid ABC transporter permease BRADO6897 7166228 - 7165053 - | branched chain amino-acid ABC transporter substrate-binding protein TERM 4769 7166270 - 7166294 + H 80 -5 -4.82855 | gap 1, overlap 7166273 TTCCCATCAGCAGTT GGCGCCGAAGT GGCG ACTTCAG-GCC TTTTTCAGTTTCGTC TERM 4770 7166626 - 7166601 - g 70 -13.2 -3.04144 | GCTTCACGGCCAAGA GCGCGCGGCG CTGGTC CGCCGCCCGC GTAGCCAACACGGCG TERM 4771 7167172 - 7167190 + G 70 -6.6 -4.21194 | overlap 7167164 CCTCGCGCTGTTCGG CACGGCCG CGG CGGTGGTG TTTTCGCTGGTCGCC BRADO6898 7166501 - 7169875 + | sensor histidine kinase TERM 4772 7169898 - 7169885 - g 75 -9.5 -4.03888 | CACTGACAACAAGAA GCGCG ACGT CGCGC TGGTCGTGGACGACT BRADO6899 7169865 - 7170782 + | CheY/LuxR family two-component transcriptional regulator BRADO6900 7172483 - 7170981 - | putative flavin-containing monooxygenase TERM 4773 7171629 - 7171653 + g 70 -10 -3.66018 | GTCGGGTCCGACGAT GGCGCTGATC TGGCC GATCAGCTCC TTCTTCACCTGCTCC BRADO6901 7173395 - 7172592 - | putative serine protease BRADO6902 7173448 - 7174086 + | hydrolase mtnA 7175242 - 7174136 - | methylthioribose-1-phosphate isomerase TERM 4774 7174190 - 7174169 - G 77 -12.9 -3.53012 | CGCCCGTTCCGGAAA CGCCGCCGC AAGC GCGGCGCCG TCCGCCTGCAACACG TERM 4775 7174921 - 7174886 - G 86 -18.2 -3.01924 | CACCGCGCGCGAATA CGCCGCATCCCGCCGC TCCG ACGGCGCGAGGCGGCG CAGCATCGTGGCCAT BRADO6904 7176131 - 7175256 - | 5'-methylthioadenosine phosphorylase BRADO6905 7176495 - 7176223 - | putative Acyl carrier protein (ACP) BRADO6906 7176885 - 7178054 + | putative acyl-CoA dehydrogenase TERM 4776 7179025 - 7179068 + G 79 -8 -4.56775 | gap 1, overlap 7179027 7179028 GTCCGCGAGGCGCTG CGGCTGGAGCGCCAGCCCGAC ACC GTCGG-CTGACGCTTCCGGAG TTTTTCAGGACACCT BRADO6907 7178095 - 7179057 + | hypothetical protein BRADO6908 7179085 - 7179966 + | putative Acyl-CoA N-acyltransferases BRADO6909 7180843 - 7179968 - | aminotransferase TERM 4777 7180537 - 7180511 - G 72 -13.7 -3.05384 | overlap 7180513 CGTCTCGGGATCGAA CAGCACGCCGC CGCCT GCGCCGTGCTG CGCCCAGTACATCGG BRADO6911 7180996 - 7181955 + | putative lipase/esterase metY 7182105 - 7183403 + | O-acetylhomoserine aminocarboxypropyltransferase (O-acetylhomoserine (thiol)-lyase or OAH sulfhydrylase) metA 7183416 - 7184393 + | homoserine O-succinyltransferase putA 7187501 - 7184406 - | bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase TERM 4778 7188527 - 7188556 + G 88 -15 -3.91897 | CGAGGTCGTGCATGG CGCGCCGTATCG CTTCAC CGATCCGGCGCG TTTCTCGCTGGCGCA BRADO6915 7187610 - 7188851 + | hypothetical protein TERM 4779 7188866 - 7188834 - f 75 -13.4 -3.06796 | gap 1 CGCGACCTGATCCAA CGCACCGGCGAGGCG TGAG CGCAT-GCCGGCGCG CAGCGCGGGCGTGCT TERM 4780 7189035 - 7188982 - g 78 -13.8 -3.57144 | gap 2, overlap 7188957 TGGTCGATTCCGAAA GGCGAGTTCGGCGCCGGCGAAGCCGC CGAG GCGGTGGCGC-GGCG-CGAATTCGCC GAGGAGCTCGGCACT BRADO6916 7188856 - 7189317 + | putative NUDIX family protein BRADO6917 7191039 - 7189342 - | putative methyl-accepting chemotaxis receptor/sensory transducer BRADO6918 7193040 - 7191829 - | major facilitator transporter BRADO6919 7193250 - 7194308 + | putative short-chain dehydrogenase/reductase (SDR) BRADO6920 7195099 - 7194323 - | hypothetical protein BRADO6921 7196375 - 7195437 - | LysR family transcriptional regulator BRADO6922 7196610 - 7198298 + | putative monooxygenase, FAD binding (hydroxylase) BRADO6923 7214413 - 7198616 - | hypothetical protein TERM 4781 7204504 - 7204526 + g 73 -6.2 -4.37886 | TATAACTACCGGCAG CCCCGCCAAT CGC ATTGCCGAGG TTTTGTAAAAAGTCG TERM 4782 7207508 - 7207539 + g 80 -14.4 -3.68351 | opp_overlap 7207517 GACGTCGGTGCGCGT GCGATCGAACCGGC CATG GCCGGTCGGATCGC TTTGCGTCGTCACGG TERM 4783 7213740 - 7213720 - G 72 -8.9 -4.14472 | CCAACACGTCCAAAA GCCCCTTGA GGT CCGAGGGGC TCGCCTTACTGCCAA BRADO6924 7215087 - 7214470 - | hypothetical protein TERM 4784 7215228 - 7215242 + r 74 -9.2 -3.86015 | opp_overlap 7215221, overlap 7215229 TCACAAATTGCAACC TCGCCG ACC CGGCGG TTTGTCAGACCAGTC BRADO6925 7216917 - 7215421 - | HlyD family secretion protein BRADO6926 7219064 - 7216914 - | toxin secretion ABC transporter (ATP-binding and membrane protein); hlyB-like protein TERM 4785 7217312 - 7217277 - G 78 -15.5 -3.21416 | gap 1, overlap 7217278 CAGCTCCAGGATGAA TTCATGCGCGCCGGCG AGCTG CGCC-GCGCGCATGAC CTGCTCCAAGGGCAT TERM 4786 7217311 - 7217278 - G 87 -19 -2.52635 | gap 1, overlap 7217277 AGCTCCAGGATGAAT TCATGCGCGCCGGCG AGCTG CGCC-GCGCGCATGA CCTGCTCCAAGGGCA BRADO6927 7219799 - 7219287 - | RTX toxin-activating lysine-acyltransferase (type I secretion system) BRADO6928 7220772 - 7220068 - | putative signal peptide TERM 4787 7220763 - 7220779 + g 90 -2.2 -5.44119 | opp_overlap 7220763 CTGCCGCAACGAAGA GGCG CAACACAGA CGCC TTTTTTTAACATGCC BRADO6929 7221210 - 7220929 - | hypothetical protein BRADO6930 7221679 - 7221290 - | hypothetical protein BRADO6931 7221778 - 7221683 - | hypothetical protein TERM 4788 7222457 - 7222499 + GH 73 -12.7 -3.15861 | gap 2 GGGCGTGGCGCTGGA CGTCTC-GACGCTG-GCCGAC TGG GTCGGCGCGGCGGCTGCGACG TTGATGCCGCTGGTC TERM 4789 7222589 - 7222619 + GH 70 -12.5 -2.87132 | opp_overlap 7222597 GCCGGTTTTGGCCAA GGGCAAGACGCGC ACGGG GCGCGTCTGGACC TATGTGCGCGACGAC BRADO6932 7221753 - 7223378 + | putative transposase BRADO6933 7223417 - 7223593 + | hypothetical protein BRADO6934 7223600 - 7224004 + | hypothetical protein BRADO6935 7225014 - 7224130 - | hypothetical protein BRADO6936 7225995 - 7225021 - | bacteriophage tail fiber protein (fragment) BRADO6939 7227775 - 7226303 - | hypothetical protein BRADO6940 7228090 - 7227782 - | hypothetical protein TERM 4790 7228250 - 7228235 - H 74 -4.6 -4.66609 | opp_overlap 7228236, overlap 7228236 GAGTCGAGCGAAAAA TTGCGC CATC GCGCAT TTCGTTTTCGCTCCG TERM 4791 7228236 - 7228249 + H 76 -8.1 -4.21922 | opp_overlap 7228235 7228236 AGTCGAGCGAAAAAT TGCGC CATC GCGCA TTTCGTTTTCGCTCC BRADO6941 7228324 - 7228527 + | hypothetical protein BRADO6942 7228524 - 7228796 + | hypothetical protein TERM 4792 7229507 - 7229495 - g 73 -9.1 -3.96624 | overlap 7229503 CATTTGGACCACAAA GGCAG AAA CTGCC TCCCGGCTCCGGGGG BRADO6943 7229043 - 7230233 + | putative phage integrase BRADO6944 7230580 - 7230230 - | hypothetical protein BRADO6945 7230721 - 7232064 + | hypothetical protein BRADO6946 7232095 - 7232262 + | hypothetical protein BRADO6947 7232252 - 7232422 + | putative excisionase TERM 4793 7232734 - 7232713 - f 84 -17.3 -2.71744 | overlap 7232708 7232710 GATCAGGATAGAGGA CGCCTCCGG AAGT CCGGAGGCG AGATGAGCCGCCGCA TERM 4794 7233173 - 7233156 - g 93 -10.5 -4.65895 | overlap 7233142 7233137 TCCGGGAGCGAAAAA GCCCCCG GCTC CGAGGGC GTCGACGCCCCTGAA BRADO6948 7232737 - 7233198 + | hypothetical protein BRADO6949 7233442 - 7233972 + | hypothetical protein BRADO6951 7235486 - 7235794 + | hypothetical protein otsA 7237172 - 7235841 - | trehalose-6-phosphate synthase TERM 4795 7237236 - 7237217 - R 70 -10 -3.65314 | gap 1, opp_overlap 7237232 CGGAATTCTCAACAA CG-GGCAGC AGG GCTGCCGCG AGTCCGCCGGTCATT otsB 7238344 - 7237517 - | trehalose-phosphatase (trehalose 6-phosphate phosphatase) (TPP) BRADO6954 7239859 - 7238345 - | major facilitator superfamily (MFS) transporter; sugar transporter TERM 4796 7239771 - 7239792 + g 70 -10.1 -3.68619 | gap 1, overlap 7239772 TCGATGATGTTGTCG TCGCGCGACG GCT CG-CGCGCGG TTTCGCTGGATTGCG BRADO6955 7242296 - 7240251 - | putative methyl-accepting chemotaxis protein TERM 4797 7241075 - 7241118 + g 73 -13 -3.31792 | gap 1, overlap 7241079 7241096 TTTCGAATTCGTCGG CGAAGCGGATCAGCTCGGCGC GGC GCGCCGCGCCGG-CCGCCTTG TTCTGGGCGTCCTGC TERM 4798 7241079 - 7241114 + g 73 -14.6 -2.87622 | gap 1, overlap 7241075 7241096 GAATTCGTCGGCGAA GCGGATCAGCTCGGCGC GGC GCGCCGCGCCGG-CCGC CTTGTTCTGGGCGTC TERM 4799 7241096 - 7241115 + g 79 -11.4 -3.79906 | gap 1, overlap 7241079 7241075 GGATCAGCTCGGCGC GGCGCGCCG CGC CGGC-CGCC TTGTTCTGGGCGTCC BRADO6956 7242408 - 7242575 + | hypothetical protein BRADO6957 7242659 - 7243144 + | putative carbon-monoxide dehydrogenase small subunit, coxS-like protein BRADO6958 7243263 - 7245608 + | putative carbon-monoxide dehydrogenase large subunit, coxL-like protein TERM 4800 7245903 - 7245885 - g 70 -10.3 -3.65046 | overlap 7245871 TGCCGATGTGAAGAA GGCGATC CCGGC GATCGCC CATCTCACATCGGTG TERM 4801 7245953 - 7245989 + G 78 -10.1 -4.08064 | opp_overlap 7245978, overlap 7245981 7245982 GCGCCCGCGGCACGA TCGGCGGCTCGATCG CCAACAA CGATCCGGCCGCGGA TTTTCCCGCAGCATT BRADO6959 7245628 - 7246428 + | putative carbon monoxide dehydrogenase medium subunit, coxM-like protein TERM 4802 7246503 - 7246468 - f 83 -11.8 -3.9712 | opp_overlap 7246470 7246475 7246489, overlap 7246475 TCACGGCACGACAAA TTCCAAACGGCGCGCA GCGA TGCGCGCCGTTTTGCT TTGCGGCATACGGCG TERM 4803 7246470 - 7246501 + F 87 -18.8 -2.73124 | opp_overlap 7246468 7246475, overlap 7246475 7246489 ACGGCACGACAAATT CCAAACGGCGCGCA GCGA TGCGCGCCGTTTTG CTTTGCGGCATACGG TERM 4804 7246496 - 7246475 - f 100 -17.3 -3.74749 | opp_overlap 7246470 7246475 7246489, overlap 7246468 ACGACAAATTCCAAA CGGCGCGCA GCGA TGCGCGCCG TTTTGCTTTGCGGCA TERM 4805 7246475 - 7246496 + F 100 -17.3 -4.54727 | opp_overlap 7246475 7246468, overlap 7246470 7246489 ACGACAAATTCCAAA CGGCGCGCA GCGA TGCGCGCCG TTTTGCTTTGCGGCA TERM 4806 7246489 - 7246521 + F 70 -12 -3.18452 | gap 1, opp_overlap 7246475 7246468, overlap 7246475 7246470 ACGGCGCGCAGCGAT GCGCGCCGTTTTGCT TTGC GGC-ATACGGCGCGC TTGCGTTGACCTCAT BRADO6960 7246637 - 7247749 + | putative Alpha-methylacyl-CoA racemase (2-methylacyl-CoA racemase) (2-arylpropionyl-CoA epimerase) hpd 7249199 - 7248081 - | 4-hydroxyphenylpyruvate dioxygenase BRADO6962 7249318 - 7249797 + | AsnC/Lrp family transcriptional regulator BRADO6963 7249887 - 7250198 + | hypothetical protein fahA 7251554 - 7250286 - | fumarylacetoacetase hmgA 7253026 - 7251677 - | homogentisate 1,2-dioxygenase BRADO6967 7253979 - 7253023 - | putative metallo-beta-lactamase family protein BRADO6968 7254234 - 7254004 - | hypothetical protein BRADO6969 7255874 - 7254243 - | hypothetical protein TERM 4807 7256236 - 7256286 + G 71 -13.9 -2.87564 | gap 2 CTCGACATTCCGGAA TGGCGCG-TGCTGGCGACGC-TCGG CTT CCGCCGCGACGCCTGCAGCGCGCAA TATGTCGCAGCCTGC BRADO6970 7256038 - 7256595 + | MarR family transcriptional regulator TERM 4808 7256609 - 7256648 + T 81 -16.4 -2.70932 | gap 1, opp_overlap 7256620 AGTTCGAGCTGCGGA GGGTGGGCAAAGCGGCGCC GAA GGCGATGCGT-GCCCACCC TCCTTCGCAACAAGG BRADO6971 7259972 - 7257528 - | putative adenylate/guanylate cyclase TERM 4809 7258167 - 7258118 - G 71 -12.7 -3.21924 | overlap 7258116 GGAGGTCGCAGAACA CGACGGTGACCTCGCGGCGATGG CTCT CCAGCAGCGCGTCGTGACCGTCG GACGAGGCGATGATC BRADO6972 7262328 - 7260229 - | putative AsmA-like protein TERM 4810 7260326 - 7260354 + g 73 -13.7 -3.15544 | GTTGCGCCCCCCTGG CCGGCGTCGGCCG GGG CGGCCGGCGGAGG TTGGTCGGCCTGCGG TERM 4811 7261257 - 7261297 + g 72 -13.1 -3.15544 | CGGTCGAGGCATCGA TCACGGCCTCGCCGGCGGC CTG GCCGTCGTAGACGCCGAGA TTGATGACGGTGGCC BRADO6973 7262538 - 7263215 + | CRP/FNR family transcriptional regulator BRADO6974 7263459 - 7265081 + | hypothetical protein TERM 4812 7265183 - 7265139 - T 77 -13.2 -3.60419 | gap 2, opp_overlap 7265136, overlap 7265145 ATGCGCAAACGACAA CCTAAAGCGCGATGACAATTCA TCC TGA-TC-TCATCGCGCTCTAGG CCGTGCTTCGAGTCT BRADO6975 7268350 - 7265204 - | AcrB/AcrD/AcrF family mulitdrug efflux protein TERM 4813 7266997 - 7266977 - G 73 -11.1 -3.62522 | overlap 7266978 GAATTGCTTGAAGAA CTGTCCGGC GAT GCCGGACAT GAAGCTGGCCGGCGC TERM 4814 7266996 - 7266978 - G 72 -14.6 -2.77192 | overlap 7266977 AATTGCTTGAAGAAC TGTCCGGC GAT GCCGGACA TGAAGCTGGCCGGCG BRADO6976 7269276 - 7268350 - | HlyD family secretion protein TERM 4815 7269390 - 7269360 - R 76 -12.7 -3.48593 | gap 1, overlap 7269363 CAGCGTCCGACACAA CGATGCGTCCCGCA AGCC TGCGAGACGCAT-G TGACGACGCCGGTAT TERM 4816 7269388 - 7269363 - R 79 -15.5 -2.88822 | overlap 7269360 CGTCCGACACAACGA TGCGTCCCGCA AGCC TGCGAGACGCA TGTGACGACGCCGGT BRADO6977 7270074 - 7269433 - | hypothetical protein BRADO6978 7271845 - 7270256 - | caspase-like domain- and TPR repeat-containing peptidase TERM 4817 7271064 - 7271043 - G 79 -3.7 -4.90266 | gap 1, overlap 7271044 7271045 GGTACGAACGAAAAA TC-CTCCGCC AGC GACGAAGAGA TCCACGGCACCTGCT BRADO6979 7272021 - 7272944 + | putative Zn-dependent hydrolase TERM 4818 7273225 - 7273251 + T 75 -13.7 -3.02511 | CACTGCCAGATGCAG CGCCCTCTCCC CTTGT GGGAGAGGGCA TGTTCGGCCCATCCG BRADO6980 7274376 - 7273402 - | hypothetical protein TERM 4819 7274906 - 7274932 + G 75 -13.7 -3.32844 | AGGGCGGCACGATCA TGGTGCAGGCG CCGGT CGCCGGCACCA TTCTGGCGTCCACCG BRADO6981 7274611 - 7275468 + | putative signal peptide TERM 4820 7275509 - 7275469 - T 90 -19.6 -2.56715 | overlap 7275465 ATGGCGAGCAATTGA GGGGCGGCACGGCCGGCG GCAGA CGCCGTCCACCCCGCCCC GGAGGCCCGAGCCAT BRADO6982 7276593 - 7275730 - | putative peptidase; caspase-like TERM 4821 7276853 - 7276829 - H 73 -11.4 -3.57144 | gap 1 GCCCGGATCTCCAAA CGGCCGCGACG AGAC CGCC-CGGCCG CCATATTGCAGCCCC BRADO6983 7277019 - 7278743 + | hypothetical protein BRADO6984 7278960 - 7279685 + | hypothetical protein TERM 4822 7279694 - 7279726 + F 82 -11.2 -3.9941 | gap 1 CCGCTAGGCTGGCCC GCCGGGGCATGCCAG CTCC CCGGCTTGCCC-GGC TTTCCTTCTGCCGCC BRADO6985 7279840 - 7281027 + | putative aminotransferase, class V; putative Serine--glyoxylate aminotransferase TERM 4823 7281070 - 7281056 - g 71 -12.8 -3.24188 | opp_overlap 7281061, overlap 7281028 CGACAGCAGCACCAA GGCGCC GGT GGCGCC ACGCCGTCCGTATTC BRADO6986 7281036 - 7283135 + | peptidase S9A family; protease II TERM 4824 7283222 - 7283234 + T 74 -9.1 -3.89822 | opp_overlap 7283185 7283222, overlap 7283181 7283179 AGCCGGGACCCATAA CCACC GTC GGTGG TTTGTGAGCTCGCTG BRADO6987 7284050 - 7283331 - | hypothetical protein TERM 4825 7283583 - 7283550 - G 77 -13.1 -3.53224 | gap 1, opp_overlap 7283553, overlap 7283553 GACGTCGCCGGGAAA CACCGGCGCG-TCGCC GCA GGCGATCGGGCCGTTG ATCTCGATGGCATGA TERM 4826 7283553 - 7283580 + g 73 -13.4 -3.2794 | gap 1, opp_overlap 7283553 7283550 GTCGCCGGGAAACAC CGGCGCG-TCGCC GCA GGCGATCGGGCCG TTGATCTCGATGGCA TERM 4827 7284095 - 7284136 + r 100 -18.1 -3.59979 | ACGCGCGGAGCGCGA GCCCGGAATCCATACTCCC GATC GTGGTTATGGATTCCGGGC TTTCCGCTCCGCGGC TERM 4828 7284209 - 7284180 - R 73 -6.9 -4.32951 | overlap 7284181 AGCTGAACTAATAAA TCGCCGGCTCGCC CACG GGCGCGCCGAAGC CGGTCTCGAGGAAGT BRADO6988 7285908 - 7284172 - | dihydroxy-acid dehydratase BRADO6989 7286768 - 7285905 - | putative ABC transporter (permease protein) BRADO6990 7287545 - 7286781 - | putative ABC transporter ATP-binding protein BRADO6991 7288576 - 7287545 - | putative ABC transporter (substrate-binding protein) BRADO6992 7288703 - 7289437 + | GntR family transcriptional regulator BRADO6993 7291544 - 7289457 - | methyl-accepting chemotaxis protein (MCP) BRADO6994 7293837 - 7291702 - | methyl-accepting chemotaxis protein (MCP) TERM 4829 7292803 - 7292779 - G 78 -9.9 -4.15044 | opp_overlap 7292792, overlap 7292780 GCGCGCGCCAAGAAA CTCGACCGACG TAT CGCCGGCCGAC AGCCGCGCCGATTCA TERM 4830 7292802 - 7292780 - G 72 -13.4 -3.08812 | opp_overlap 7292792, overlap 7292779 CGCGCGCCAAGAAAC TCGACCGACG TAT CGCCGGCCGA CAGCCGCGCCGATTC TERM 4831 7293135 - 7293181 + g 100 -19.4 -3.18264 | opp_overlap 7293102, overlap 7293136 CGGTCGCAAGCGCCG CGGCGAGTTCGCCGAGATCGCG CCG CTCAAGCTCGGCGAACTCGCCC TTGATACGTCCGAGC TERM 4832 7293136 - 7293180 + g 100 -22.9 -2.50816 | opp_overlap 7293102, overlap 7293135 GGTCGCAAGCGCCGC GGCGAGTTCGCCGAGATCGCG CCG CTCAAGCTCGGCGAACTCGCC CTTGATACGTCCGAG BRADO6995 7294144 - 7294614 + | response regulator receiver (CheY-like protein) TERM 4833 7295279 - 7295223 - g 87 -18.7 -2.75074 | opp_overlap 7295235, overlap 7295220 7295235 TCGACGGCAACACCA CCGATCCGAAGACGGGGGTGCCGATGC TGT GCATCGGAACTCCGGTGTTCGCACCGG ACGGCAAGCCGTTTG TERM 4834 7295235 - 7295267 + G 72 -14.1 -3.01712 | opp_overlap 7295220 7295235 7295223 CCACCGATCCGAAGA CGGGGGTGCCGATGC TGT GCATCGGAACTCCGG TGTTCGCACCGGACG TERM 4835 7296698 - 7296666 - g 79 -13.4 -3.72576 | overlap 7296667 GTCTGGCGCAGGAAA CGCTGCGCGAGAGC GAGCA GCTCGCGCGCAACA TCGTCGAGACCGCGC TERM 4836 7296697 - 7296667 - g 73 -14.7 -2.83403 | overlap 7296666 TCTGGCGCAGGAAAC GCTGCGCGAGAGC GAGCA GCTCGCGCGCAAC ATCGTCGAGACCGCG BRADO6996 7294595 - 7298203 + | sensor histidine kinase BRADO6997 7298985 - 7298350 - | two-component LuxR family transcriptional regulator BRADO6998 7299944 - 7299435 - | putative response regulator receiver protein (CheY-like) BRADO6999 7300464 - 7300141 - | hypothetical protein cheR 7301368 - 7300499 - | chemotaxis protein methyltransferase cheY 7301787 - 7301398 - | chemotaxis protein cheY cheW 7302291 - 7301818 - | chemotaxis protein cheW cheA 7305105 - 7302307 - | chemotaxis protein cheA TERM 4837 7305216 - 7305192 - R 80 -14.3 -3.14132 | opp_overlap 7305210 CGGTGGCTTCACCAA GACGCGCGGAT CGA ATCCGCCCGTC GCTCGGCTCGACGGA flbT 7305792 - 7305355 - | flagellar biosynthesis repressor FlbT TERM 4838 7305931 - 7305911 - R 100 -15.4 -4.13767 | opp_overlap 7305909 7305904 7305900 7305898 TCTTCTAGCCGAAAA CGGCGGGG ACCAG CCCCGCCG CCTTCGATGGTGTTG BRADO7005 7307532 - 7305961 - | hypothetical protein BRADO7006 7308554 - 7307790 - | hypothetical protein TERM 4839 7309110 - 7309131 + H 86 -5.1 -5.18726 | overlap 7309115 AGGAACCAATGAATG TGACTGGGA ATCT TCCCTGTTA TTTTTCTTGTCAGCA BRADO7007 7309223 - 7309945 + | CRP/FNR family transcriptional regulator BRADO7008 7310182 - 7310571 + | putative response regulator receiver (CheY-like protein) TERM 4840 7310597 - 7310618 + F 100 -17.3 -4.77165 | overlap 7310598 ACATTCCTTGCGCGG CGGCCGGAC GCGC GTCCGGCCG TTTTCTTGTCGGCAG BRADO7009 7310793 - 7311206 + | putative response regulator receiver (CheY-like protein) TERM 4841 7312214 - 7312190 - g 72 -11.4 -3.55444 | GGCCGAGGCTGCAAA CGCGGCGAAG TCGAC CTTCGTCGCG ATGATGAGCCACGAG BRADO7010 7311213 - 7313765 + | sensor histidine kinase BRADO7011 7314004 - 7314249 + | hypothetical protein BRADO7012 7314977 - 7314378 - | LuxR family transcriptional regulator TERM 4842 7316130 - 7316110 - g 73 -12.5 -3.41051 | CCAGCTGGAGGACAA GCGCCTCGC GCT GCGAGTCGC CCTGAAGAACAACCG BRADO7013 7315286 - 7316434 + | hypothetical protein TERM 4843 7316414 - 7316454 + TF 83 -13.2 -3.95584 | gap 1, opp_overlap 7316407 7316409 GCCATCAAGACGGCG CTGCGCTCGGCGACCGGCT AGTC AGCCGG-CGGCAGGCGCGG TTTCGTTGCTCGCAA BRADO7014 7316772 - 7316431 - | hypothetical protein BRADO7015 7316738 - 7317121 + | hypothetical protein ipdC 7318817 - 7317180 - | indole-3-pyruvate decarboxylase TERM 4844 7317848 - 7317792 - G 72 -13.4 -3.19602 | overlap 7317790 GCGCGGATAGGAAGA GCGCTGCCGCGGCGTTCCGGGCTGAG CGGCC CGCGGCGCGGCACGCTGCGCAAGCGC ATCGATCAGGTCGCG BRADO7017 7319123 - 7318944 - | hypothetical protein BRADO7018 7320514 - 7319336 - | hypothetical protein TERM 4845 7320548 - 7320560 + r 81 -7.7 -4.41844 | ACGAGATTTGCGTGA TCCGA CGG TCGGA TTTTATGCAGATTTT BRADO7019 7320955 - 7320689 - | hypothetical protein BRADO7020 7321691 - 7321068 - | putative signal peptide BRADO7021 7322663 - 7322010 - | putative partition protein BRADO7022 7323943 - 7322693 - | putative glycosyltransferase, group 1 TERM 4846 7323011 - 7322995 - G 81 -12.3 -3.767 | CATGCACCGACGAAA CCTGCAG AAC CTGCAGG TACTGATCACGTGGG TERM 4847 7323774 - 7323827 + g 78 -10.1 -4.07568 | gap 1 TTCAGCAGTCGCACG CCAGG-CGTCGCCTTGGCGGTGGTCG AAC CGACGGCCACCACGGTGTGGTCCTGG TTTTCCGAAAGCGCC TERM 4848 7324732 - 7324746 + G 75 -2.8 -4.83615 | opp_overlap 7324730 CCAACCGCTACAACT TCGC GGTCGAG GCGA TTTTTCTGGGCGCTC BRADO7023 7324089 - 7324973 + | hypothetical protein BRADO7024 7324977 - 7327553 + | putative glycosyl transferase BRADO7025 7329858 - 7327510 - | putative glycosyl transferase, group 2 TERM 4849 7328697 - 7328687 - G 74 -5.4 -4.44046 | overlap 7328689 CGGACGGCAAAGAAA TACG CGC CGTA GGCCTGCTCGAGGGC rfbD 7330892 - 7329984 - | dTDP-4-dehydrorhamnose reductase TERM 4850 7330436 - 7330417 - G 70 -10 -3.72695 | ATCGTGCGCATGAAA TTCGCGCC TGCG GACGCGAA CACCCAGGCCGTGCG rfbC 7331446 - 7330892 - | dTDP-4,deoxyrhamnose 3,5 epimerase TERM 4851 7331089 - 7331067 - G 73 -6.2 -4.31433 | overlap 7331068 7331069 7331086 CATTTGTAGAAGAAA TCCGCGCTCT CCG AGAGCACGAC GAAGCCGTGGGCGAA TERM 4852 7331747 - 7331731 - g 77 -13.7 -3.4072 | GACGCCGCAGGACAA GCCGCTG TTC CAGCGGC TGCTCGGCGACGGCA rfbA 7331558 - 7332433 + | glucose-1-phosphate thymidylyltransferase rfbB 7332449 - 7333522 + | dTDP-D-glucose 4,6-dehydratase BRADO7031 7335251 - 7334055 - | hypothetical protein TERM 4853 7334693 - 7334677 - G 73 -6.6 -4.33248 | GAAGTCGACAAGAAA TTGGTC AGCCG GACCAA CCCCCGATCAGCGGC BRADO7032 7336350 - 7335307 - | hypothetical protein BRADO7033 7338788 - 7336353 - | putative glycosyl transferase, group 2 BRADO7034 7341344 - 7339392 - | TPR repeat-containing protein BRADO7035 7342738 - 7341362 - | HlyD family secretion protein BRADO7036 7344998 - 7342713 - | putative toxin secretion ABC transporter (ATP-binding and membrane protein); hlyB-like protein BRADO7037 7345679 - 7345125 - | putative S-adenosyl-L-methionine (SAM)-dependent methyltransferase BRADO7038 7346215 - 7345724 - | hypothetical protein BRADO7039 7347842 - 7346274 - | hemolysin-type calcium-binding repeat-containing protein TERM 4854 7347495 - 7347444 - G 83 -13 -3.86346 | opp_overlap 7347451, overlap 7347447 7347489 GGAGTCGTTGACAAA CACCTGATTGTCGCCATTGCCGGT GGCG ACGAGCACCGGCGACAATCCGTTG ACAGATAGGACGACG TERM 4855 7347850 - 7347840 - G 79 -3.2 -5.0133 | CACTGCCGGAAAAAA CAAC TCA GTCG CGTCCGGAAATTATC TERM 4856 7348064 - 7348028 - R 100 -18.2 -3.79747 | gap 2, opp_overlap 7348034, overlap 7348031 7348034 TTATTTATGACCAAA CGATAACGCCGCCTCGGC GGA GCCG-GGCGGCGTTAT-G AAGGCAATGTCGACT TERM 4857 7348062 - 7348031 - R 93 -21 -2.98493 | gap 1, opp_overlap 7348034, overlap 7348028 7348034 TTTATGACCAAACGA TAACGCCGCCTCGGC GGA GCCG-GGCGGCGTTA TGAAGGCAATGTCGA TERM 4858 7348034 - 7348059 + r 93 -18.3 -3.29263 | gap 1, opp_overlap 7348031 7348028 7348034 ATGACCAAACGATAA CGCCGCCTCGGC GGA GCCG-GGCGGCG TTATGAAGGCAATGT TERM 4859 7348059 - 7348034 - R 100 -18.3 -3.63251 | gap 1, opp_overlap 7348034, overlap 7348031 7348028 ATGACCAAACGATAA CGCCGCCTCGGC GGA GCCG-GGCGGCG TTATGAAGGCAATGT BRADO7040 7349739 - 7348099 - | hemolysin-type calcium-binding repeat-containing protein TERM 4860 7349578 - 7349532 - G 91 -15.9 -3.96068 | gap 1, overlap 7349529 TGACCTCAATAAGAA CGTTCGCGTTCGGGTCTGGCGT CCCT ACGCCAGTCCCGA-CCTGAACG GGGATCGCATCGCCA BRADO7042 7351431 - 7350271 - | putative glycosyltransferase, group 1 BRADO7043 7353404 - 7351428 - | hypothetical protein TERM 4861 7351641 - 7351613 - G 72 -13.1 -3.18274 | GCGACGGCAACGCAA GCTCGCCTCGTCC TCC GGACCAGGTGAGC GTCGCTCGATCCGCA BRADO7044 7355593 - 7353401 - | oxidoreductase BRADO7045 7356804 - 7355671 - | putative glycosidase TERM 4862 7356907 - 7356876 - H 95 -10 -4.67123 | gap 1, opp_overlap 7356876 7356896, overlap 7356877 CCAAAAGAAGCAAAA TCGCCGTCCGCAGCC TGT GGCCGCCG-CGGCGT CGCGCGGGATTCGTC TERM 4863 7356906 - 7356877 - H 77 -13.5 -3.38647 | gap 1, opp_overlap 7356876 7356896, overlap 7356876 CAAAAGAAGCAAAAT CGCCGTCCGCAGCC TGT GGCCGCCG-CGGCG TCGCGCGGGATTCGT BRADO7046 7357079 - 7358350 + | glycosyl transferase family protein BRADO7047 7358495 - 7359805 + | GDP-mannose 6-dehydrogenase (GMD) BRADO7048 7359802 - 7360530 + | putative ubiquinone/menaquinone biosynthesis methyltransferase-related protein BRADO7049 7361142 - 7360549 - | putative S-adenosyl-L-methionine (SAM)-methyltransferase BRADO7050 7361925 - 7361317 - | putative S-adenosyl-L-methionine-dependent (SAM)-methyltransferase BRADO7051 7363310 - 7361964 - | polysaccharide transporter BRADO7052 7364602 - 7363307 - | putative exopolysaccharide biosynthesis protein BRADO7053 7365714 - 7364602 - | putative glycosyl transferase BRADO7054 7366467 - 7365718 - | putative S-adenosyl-L-methionine (SAM)-methyltransferases TERM 4864 7366065 - 7366045 - G 79 -11.1 -3.99324 | TTCGACGACGACAAA CTTGCGCGC GAC GCGGGCAAG CTCGCGAAGCAGCGA BRADO7055 7367362 - 7366577 - | hypothetical protein BRADO7056 7369622 - 7367346 - | putative exopolysaccharide biosynthesis protein TERM 4865 7369720 - 7369679 - R 74 -2.1 -4.92756 | gap 1, overlap 7369682 7369709 7369710 ATCATCAAAAATAAA TGAGCGCGCAGGTCCT-GGG GGG CCCGAAAATCGCCGCGCGCA GAGTTGGCCACCGTG BRADO7057 7370418 - 7369759 - | putative signal peptide BRADO7058 7371972 - 7370518 - | putative O-antigen polymerase BRADO7059 7373007 - 7372000 - | putative polysaccharide export protein BRADO7060 7373437 - 7373712 + | hypothetical protein BRADO7061 7374060 - 7375364 + | permease TERM 4866 7375525 - 7375543 + G 77 -3.8 -4.83169 | GTAGAAATCACGCAT CCTCGG AGGTGGG TCGAGG TTTTTGTGGGCGACT BRADO7062 7375369 - 7376115 + | putative serine/threonine protein phosphatase BRADO7063 7376112 - 7376726 + | hypothetical protein BRADO7064 7378171 - 7376723 - | putative sugar transferase protein TERM 4867 7376763 - 7376749 - G 88 -7.8 -4.99043 | overlap 7376750 TGCTCAGAAAGAAAA CGCGGA CCG TCCGCA GCAGGATGTGTAGAT BRADO7065 7378823 - 7378464 - | putative transposase TERM 4868 7378729 - 7378739 + g 72 -6.8 -4.19704 | ACGCTGACCCCGAGC GCCT TGC AGGC TTTTGCCTGCGATTG TERM 4869 7378782 - 7378798 + g 77 -7.9 -4.30987 | overlap 7378758 7378783 CAGGTCTCCCGCCTG GCGCAGC TTA GCTGCGA TTTCTTCTGCCGAAT BRADO7066 7379299 - 7379493 + | hypothetical protein BRADO7067 7379894 - 7379721 - | hypothetical protein BRADO7068 7380670 - 7380224 - | hypothetical protein TERM 4870 7380417 - 7380451 + g 77 -12.1 -3.63298 | gap 1, overlap 7380413 7380415 CGCGCTGCAGCGTCG CGCCGGGCGCGCTCGG CGCG CTGA-CGCGCCTGTCG TATTCTTTCCTTCCA BRADO7069 7381610 - 7380696 - | putative Acyl-CoA N-acyltransferase TERM 4871 7381105 - 7381084 - G 73 -3.5 -4.57569 | overlap 7381085 7381086 TCACGCTCCGAAAAA GCCTCGACG GTCA CGCCGGCGC GCGGCTTCGCCAGTG BRADO7070 7383038 - 7381791 - | hypothetical protein BRADO7071 7383144 - 7384328 + | putative glycosyltransferase, group 1 BRADO7072 7385604 - 7384426 - | putative glycosyl transferase, group 1 BRADO7073 7386619 - 7385597 - | putative polysaccharide deacetylase BRADO7074 7388136 - 7386616 - | putative virulence factor MviN-like protein BRADO7075 7389512 - 7388133 - | hypothetical protein TERM 4872 7389427 - 7389384 - G 75 -13 -3.37245 | gap 1, overlap 7389380 GCAGCCGAACACGAA CAGCGCCCGCGATGCGCCGCC GAG GACGCCGG-CCGCGAGCGCCG TGGCCATGAGGACGG BRADO7076 7390666 - 7389509 - | putative glycosyltransferase, group 1 BRADO7077 7392942 - 7390663 - | putative lipopolysaccharide biosynthesis protein BRADO7078 7394109 - 7392955 - | putative glycosyl transferase, group 1 family protein BRADO7079 7395181 - 7394489 - | putative alcohol dehydrogenase class III BRADO7080 7396645 - 7395320 - | hypothetical protein TERM 4873 7396943 - 7396913 - R 71 -9.7 -3.79113 | gap 1 ACCTCGCGACAACAA CCGT-CGTCCCGGC GAAC GCCGGGACCCACAG CCACCGGCCGGCATG TERM 4874 7397143 - 7397123 - R 95 -10.3 -4.64676 | TCATGTTCAACAAAA GCCTCCGGC GAT GCCGAGGGC GCAGGGAAGGCCGGG BRADO7081 7398176 - 7397715 - | hypothetical protein BRADO7083 7398413 - 7398694 + | hypothetical protein BRADO7084 7398691 - 7399116 + | putative plasmid stability protein TERM 4875 7400448 - 7400470 + G 75 -2.7 -4.77165 | gap 1, overlap 7400431 GCGACATCCTGTCCG GCT-TCCTCG CGCC CGATGAGAGC TTTTCTTATGGCCGC BRADO7085 7399268 - 7400572 + | L-sorbosone dehydrogenase BRADO7086 7400646 - 7400819 + | hypothetical protein BRADO7087 7401854 - 7400973 - | NAD-dependent deacetylase TERM 4876 7401293 - 7401276 - G 79 -8.3 -4.30719 | overlap 7401278 7401286 7401287 CGCGGGCACAACAAA GGCGGCG AAAT CGACGCC GTCCAGATCGGCATC BRADO7088 7401900 - 7402052 + | hypothetical protein BRADO7089 7402961 - 7402056 - | putative polysaccharide deacetylase family protein BRADO7090 7403763 - 7402966 - | putative sperimidine/putrescine ABC transporter (permease protein) BRADO7091 7404629 - 7403763 - | spermidine/putrescine ABC transporter permease TERM 4877 7404051 - 7404021 - G 79 -13.2 -3.63991 | overlap 7404023 GATGACGCGCAAGAA CACGACGATCGGCG AGG CGCCGAGCGTCGCC GCGGCTTCCGCATAG TERM 4878 7404049 - 7404023 - G 89 -18 -3.39784 | overlap 7404021 TGACGCGCAAGAACA CGACGATCGGCG AGG CGCCGAGCGTCG CCGCGGCTTCCGCAT TERM 4879 7404584 - 7404564 - G 81 -12.5 -3.78329 | CGCGACGAAGCCAAA GGCCGCGAG CCG CTCGCGGTC CGGTGCGGGCTTGAG BRADO7092 7405705 - 7404626 - | spermidine/putrescine ABC transporter ATP-binding protein TERM 4880 7405277 - 7405228 - G 72 -14.1 -3.01712 | GCGCCTCGTCGAACA GCAGCACGTCGGGTTCGACCGCG ATGG CGCGCGCCAGCGCGACGCGCTGC TGCTGGCCGCCCGAC BRADO7093 7406736 - 7405702 - | spermidine/putrescine ABC transporter substrate-binding protein TERM 4881 7406871 - 7406887 + H 78 -2.9 -5.03314 | overlap 7406852 7406872 CGCTGTGCCTCCTCG CGTGCAT AAT GTGCACA TTTTTTGGAGATGAC TERM 4882 7407294 - 7407331 + G 86 -17.7 -3.06501 | gap 1, overlap 7407329 GACGCGCACCTCGCC GAGGAGCGCATCGCCGCG CAG CGCGGCGAT-CGCGCCGC TTCGGTCCGGCTGTC BRADO7094 7406934 - 7407671 + | GntR family transcriptional regulator BRADO7095 7409777 - 7407684 - | putative adenylate cyclase BRADO7096 7410093 - 7410398 + | hypothetical protein TERM 4883 7410560 - 7410572 + G 70 -10.5 -3.63694 | CATCCTCGGCGAGGC GCCGC AGC GCGGC TTCTTCGAGGTACAT BRADO7097 7410438 - 7411358 + | hypothetical protein BRADO7098 7411345 - 7412127 + | hypothetical protein BRADO7100 7414240 - 7412597 - | hypothetical protein BRADO7099 7412124 - 7412657 + | DoxD domain-containing protein BRADO7101 7416156 - 7414648 - | hypothetical protein BRADO7102 7416992 - 7416495 - | SecC motif-containing protein BRADO7103 7417130 - 7417486 + | hypothetical protein BRADO7104 7417982 - 7419022 + | hypothetical protein BRADO7105 7419393 - 7419061 - | hypothetical protein BRADO7106 7419597 - 7420205 + | hypothetical protein BRADO7107 7420620 - 7420249 - | putative carboxymuconolactone decarboxylase family protein BRADO7108 7421145 - 7420624 - | putative RNA polymerase sigma factor protein BRADO7109 7421758 - 7422255 + | putative permease protein BRADO7110 7423439 - 7422270 - | LuxR family transcriptional regulator TERM 4884 7423609 - 7423648 + r 70 -12.8 -2.94099 | gap 1, opp_overlap 7423598 7423625 7423631 AGCACGCGACCTGAT CACCCGAACGCGACAAGAC GAA GTCC-GTCGCGGTCGGGCG TCTCTGATGGACCGG TERM 4885 7423692 - 7423674 - R 91 -9.6 -4.45068 | opp_overlap 7423674 ACCGGGAACAACAAA GATGCTTC GCC GAAGCACC TTCTATTCGTCTTCG BRADO7111 7425093 - 7423897 - | putative acyl-CoA dehydrogenase amiF 7426358 - 7425345 - | formamidase BRADO7113 7427035 - 7426472 - | TetR family transcriptional regulator BRADO7114 7427509 - 7427048 - | hypothetical protein BRADO7116 7427789 - 7429372 + | sensor histidine kinase TERM 4886 7429458 - 7429434 - f 82 -14.3 -3.25823 | opp_overlap 7429410 7429407 GTGCGCTCACATCAA GCGCTGCATTC ATT GAATGCTGCGC GCCTGTCGACTGCGG BRADO7117 7429491 - 7430051 + | hypothetical protein BRADO7118 7430376 - 7430179 - | hypothetical protein BRADO7119 7430787 - 7431623 + | putative outer membrane protein precursor TERM 4887 7431643 - 7431665 + T 71 -12.7 -3.05596 | overlap 7431645 CGCCTTCTCTCCGAA GGGCCTCGG GTCAG CCGAGGCTC TTCGATCCGGGACTG BRADO7120 7432822 - 7431692 - | putative ABC transporter (permease protein) TERM 4888 7432619 - 7432602 - G 77 -10.5 -3.91716 | overlap 7432603 7432613 GGATTTTGGAAATAA GGCGGCA GGAA CGCCGCC GCGATGCGGCGCGAC BRADO7121 7435570 - 7432826 - | ABC transporter permease ATP-binding protein BRADO7122 7436571 - 7435567 - | HlyD family secretion protein TERM 4889 7436498 - 7436483 - G 72 -11.8 -3.61902 | overlap 7436484 TGCCACCAGACATAA CCGCCG CCTC CGGCGG CACCGACGGCGAGCA TERM 4890 7436531 - 7436541 + g 79 -2.4 -5.00616 | opp_overlap 7436528 7436529 AAGAGCAACAAAGGC CAGC GCA GCCG TTTTTTCGCCGGCAC BRADO7123 7438749 - 7436791 - | TPR domain-containing protein TERM 4891 7437526 - 7437507 - G 70 -11.4 -3.41051 | gap 1, opp_overlap 7437505, overlap 7437508 CGACCTCGAGCACAA CG-CGCGCG CCC CGCGCGGCG ACCATCGTCGCGTAG TERM 4892 7438025 - 7437998 - G 78 -14.1 -3.53012 | GCGCGCTGGCCGAAA GGCTGCGCCTC GTCGTA GCGGCGCAGCC GCCGCAGCGAGATGC uppS 7439577 - 7438837 - | undecaprenyl pyrophosphate synthetase BRADO7125 7439994 - 7439614 - | hypothetical protein BRADO7126 7440598 - 7439981 - | hypothetical protein TERM 4893 7440159 - 7440134 - G 70 -11.1 -3.54029 | gap 1, overlap 7440131 GGCGATGAAGTAGAA CGCGC-CGGCCA GCG CGACCGAGCGCG GCAGCGAGCGCACCG BRADO7127 7441025 - 7440726 - | putative signal peptide BRADO7128 7442144 - 7441170 - | hypothetical protein TERM 4894 7442605 - 7442583 - g 86 -17 -3.28791 | opp_overlap 7442576, overlap 7442570 AGGCCCGGTCGACAA GCAGGGCGCC CGC GGCACCCTGC GCTCGGTGTATTGCC BRADO7129 7442257 - 7442667 + | putative glyoxalase I family protein BRADO7130 7444013 - 7442682 - | putative signal peptide TERM 4895 7442997 - 7442955 - G 71 -14.1 -2.87344 | gap 2 CAGCCGGGTCACATA GGCCT-CGGAGCC-GCCGCCG GCG CGACGGCCGGCGCTGAAGGCC GTGGCCTCGTCGCTG BRADO7131 7444834 - 7444010 - | hypothetical protein BRADO7132 7444991 - 7446565 + | crotonobetaine/carnitine-CoA ligase BRADO7133 7446987 - 7446637 - | putative cytochrome P450 family protein BRADO7134 7447876 - 7446806 - | putative cytochrome P450 family protein BRADO7135 7449087 - 7447978 - | hypothetical protein TERM 4896 7449274 - 7449250 - R 100 -17.2 -4.58773 | opp_overlap 7449242 7449241 7449240 CTGACCAAACGAAAA CCGCCGGAGA GGGCA TCTCCGGCGG TTCCGAGGTTGTTGT BRADO7136 7451587 - 7449305 - | putative aldehyde dehydrogenase precursor BRADO7137 7452072 - 7451584 - | putative aldehyde dehydrogenase TERM 4897 7452415 - 7452455 + G 72 -11.6 -3.53343 | ATTGCAGGCGACGTC GGAGCGCGCGAGGCTGCG CCGCT CGTCGCGGCGCGCGCCCC TTTCACAGCGACGTT BRADO7138 7452379 - 7452702 + | hypothetical protein BRADO7139 7452737 - 7453408 + | putative carboxymethylenebutenolidase (dienelactone hydrolase) (DLH) BRADO7140 7454273 - 7453563 - | putative polysaccharide export protein TERM 4898 7454419 - 7454394 - R 100 -19.1 -5.06414 | opp_overlap 7454388 7454417 CCTGCCGAAGAAAAA CCCTCTCCCAC AAAC GTGGGAGAGGG TTCGGATGTTCAAGC msrA 7455113 - 7454457 - | methionine sulfoxide reductase A TERM 4899 7454595 - 7454628 + g 70 -5.9 -4.26076 | gap 1 GGGCGCGATCTCCGT GGTGAT-CGCGCCGAG ACC CTTGGCACGCAGCGCC TTTTCATAGGCCTGC TERM 4900 7455131 - 7455168 + r 80 -14.2 -3.13475 | gap 2, opp_overlap 7455114 7455113 GCTGTCTCCGGGCAT GG-CATCGC-CCGCCGGA ACAG TCCGGCGGCGCGAGGGCC TTCACTGTGGGATTA BRADO7142 7455554 - 7455237 - | putative signal peptide TERM 4901 7455842 - 7455826 - H 70 -10.1 -3.61715 | GAGGCGTCCGAACAA CCCACCG CGT CGATGGG GCCGCGTCAAGCGGG TERM 4902 7455966 - 7455941 - g 77 -6.7 -4.57073 | overlap 7455942 GACCTCCGCGAAAAA GGCGACGCGCA AGAT TGCCCGCCGCA CCATCATCAACAAGT TERM 4903 7456147 - 7456127 - g 72 -8.2 -4.03888 | CATTCACAAGAACAA CGCGAGCC GCAAA GTCTCGCG CCTCGTCCATCAGAT rpsT 7455915 - 7456184 + | 30S ribosomal protein S20