TransTermHP v2.07 (built on Jan 21 2009) 25 bins; sample size is 20000000 --pval-conf=/fs/szasmg2/carlk/TTupdate2/expterm.dat --gc=-2.3 --au=-0.9 --gu=1.3 --mm=3.5 --gap=6 --max-len=59 --min-stem=4 --max-loop=13 --min-loop=3 --uwin-length=6 --uwin-require=3 --max-hp-score=-2 --max-tail-score=-2.5 --loop-penalty=1,2,3,4,5,6,7,8,9,10,11 --start-cut=0 --end-cut=25 Genes: 0.735179 %AT, 522221 nt, 3730 terms. Intergenic: 0.797003 %AT, H2T: 80788 nt, 901 terms; T2T: 18389 nt, 497 terms; H2H: 29223 nt, 911 terms. Each terminator entry starts in column 3 and is of the form: term # start - end +/- regionconf hp tail | notes Followed by the sequence of the 5' tail, 5' stem, loop, 3' stem, and 3' tail. Genes are interspersed, and start the first column. SEQUENCE gi|21672294|ref|NC_004061.1| Buchnera aphidicola str. Sg (Schizaphis graminum), complete genome (length 641454) gidA 1 - 1896 + | tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA atpB 2026 - 2844 + | F0F1 ATP synthase subunit A TERM 1 3013 - 3001 - g 73 -9.1 -2.84015 | opp_overlap 3000 AAATTTTTAGAAGGA GCTGC AAG GCAGC CTGATTTAGTTCCTT atpE 2887 - 3126 + | F0F1 ATP synthase subunit C TERM 2 3433 - 3418 - g 81 -2.6 -6.11644 | TTATTCAAAAAAAAA TGAATC AAAT AATTCA AGATTCTAAAGAAAA atpF 3237 - 3728 + | F0F1 ATP synthase subunit B TERM 3 3848 - 3831 - g 100 -7.1 -5.63857 | overlap 3847 AAAAATGGAAAAAAA CGTTAAT TTTT ATTAACG AAATCATTCGTTCAA atpH 3740 - 4273 + | F0F1 ATP synthase subunit delta TERM 4 4959 - 4981 + G 82 -8.4 -3.97051 | overlap 4974 AATACTATTGTTGTT GTTGCTTCAG CTT CAGAAGCAGC TTCTTTGCAATATTT TERM 5 5612 - 5589 - g 85 -5.4 -5.30616 | overlap 5592 TTATTGAAACAAAAA CAATATAGAC CTAT GTCTATATCA GAACAAGGATTAATG TERM 6 5609 - 5592 - g 78 -7.1 -4.72696 | overlap 5589 TTGAAACAAAAACAA TATAGAC CTAT GTCTATA TCAGAACAAGGATTA atpA 4287 - 5819 + | F0F1 ATP synthase subunit alpha TERM 7 5935 - 5923 - g 70 -6.3 -4.15114 | AAGATCAAATAATAA GTGTT ACA AACAC TAAAAAGATCACTAA TERM 8 6346 - 6330 - g 82 -8.1 -4.2828 | opp_overlap 6329 CCTGATTTATCAAAA TTAATCG GAT CGATTAA AATTATTTTAGAAAA atpG 5886 - 6761 + | F0F1 ATP synthase subunit gamma TERM 9 7112 - 7097 - g 77 -4.8 -5.19212 | overlap 7107 AGGACCATTAAAAAA TTTAGA TAAT TCTAAA TTAGAGTACTGGGAA atpD 6783 - 8183 + | F0F1 ATP synthase subunit beta atpC 8205 - 8621 + | F0F1 ATP synthase subunit epsilon TERM 10 8744 - 8756 + T 78 -4.1 -5.72616 | overlap 8745 AATATCTATGTTTTC TGCTT TTA AAGCG TTTTTTTGTATAAAT gyrB 11137 - 8726 - | DNA gyrase subunit B TERM 11 8991 - 9003 + g 73 -3.5 -5.35222 | GTGTTTTTTATGTCA TTTAT TTT ATAAA TTTTTTCTCCCTTTT TERM 12 9322 - 9338 + g 77 -2.3 -5.94743 | opp_overlap 9322 TCAGTTCATTCAATA TTAATTC AGG GAAATAA TTTTTATTTTTTTTC dnaN 12392 - 11292 - | DNA polymerase III beta chain dnaA 13761 - 12397 - | chromosomal replication initiator protein rpmH 14180 - 14323 + | 50S ribosomal protein L34 TERM 13 14472 - 14443 - g 70 -8.7 -2.62495 | opp_overlap 14441 14445 14469, overlap 14442 14445 TTCACATAAACATAT TAGGACGTTCTAA TTTA TTAGGACATCCTA GATTAGGTCTTAGTA rnpA 14337 - 14681 + | ribonuclease P protein component TERM 14 14666 - 14684 + G 86 -4.6 -5.67283 | opp_overlap 14669, overlap 14669 GGAGTATATATGGTC AAACTATC AAC GATAGTTG TTTTTTGTTTAACTT TERM 15 14669 - 14681 + G 79 -6.3 -4.88687 | opp_overlap 14669, overlap 14666 GTATATATGGTCAAA CTATC AAC GATAG TTGTTTTTTGTTTAA yidD 14660 - 14917 + | hypothetical protein TERM 16 14926 - 14936 + G 93 -4 -6.20267 | opp_overlap 14926 ATATTAATGATGGAA TTAC AGC GTAA TTTTTTTATTTTTGC TERM 17 15044 - 15021 - g 93 -2.5 -6.47325 | opp_overlap 15021 AAAAAATAAAAAAAA TGAAGAAAC TAATTC GTTTTTTCA TTTGAATCATAAAAA TERM 18 15870 - 15854 - g 73 -8.7 -3.23466 | opp_overlap 15853 AAAAACAGCAAGAGA TGGCGCT AGT AGCACCA AATTTAGATTTAACA yidC 14917 - 16530 + | inner membrane protein trmE 16573 - 17943 + | tRNA modification GTPase TrmE TERM 19 17986 - 18002 + F 70 -8.7 -2.62616 | opp_overlap 17976, overlap 17977 TTGAACCACCGACAC GGGGATT TTC AGTCCCC TGCTCTACCGACTGA TERM 20 18254 - 18224 - f 75 -2.8 -5.99154 | opp_overlap 18209 18227, overlap 18216 TATTAAATAAAAAAA TAATTTTTTTTAAT ATA ATTAAGCAAAATTA TTCACAGGAGTATCG groES 18275 - 18565 + | co-chaperonin GroES TERM 21 18948 - 18938 - g 73 -6.8 -4.15508 | AATGAAGGCTTAAAA GCTG TAG CAGC CGGTATGAATCCTAT groEL 18623 - 20269 + | chaperonin GroEL TERM 22 20304 - 20347 + T 84 -5.4 -5.7946 | opp_overlap 20306 20308 20310 20340 20342, overlap 20288 20310 20336 20342 TTTTAAATTAATTTA AAGATATCTTTCCTCAGATA TATT TGTCTGAGGAAAGATTTTAA TTTTTTTATTAAGAA TERM 23 20345 - 20306 - T 75 -8 -3.83214 | opp_overlap 20288 20304 20310 20336 20342, overlap 20308 20310 20340 20342 TTAAATTAATTTAAA GATATCTTTCCTCAGATA TATT TGTCTGAGGAAAGATTTT AATTTTTTTATTAAG TERM 24 20343 - 20308 - T 83 -10.6 -3.492 | opp_overlap 20304 20310 20336 20342, overlap 20306 20310 20340 20342 AAATTAATTTAAAGA TATCTTTCCTCAGATA TATT TGTCTGAGGAAAGATT TTAATTTTTTTATTA TERM 25 20341 - 20310 - T 93 -13.2 -3.30507 | opp_overlap 20304 20310 20336, overlap 20308 20306 20340 ATTAATTTAAAGATA TCTTTCCTCAGATA TATT TGTCTGAGGAAAGA TTTTAATTTTTTTAT TERM 26 20310 - 20341 + T 100 -15.4 -4.96276 | opp_overlap 20310 20308 20306 20340, overlap 20304 20336 ATTAATTTAAAGATA TCTTTCCTCAGATA TATT TGTCTGAGGAAAGA TTTTAATTTTTTTAT TERM 27 20378 - 20340 - T 83 -10.8 -3.72695 | opp_overlap 20310 20304 20336 20342, overlap 20310 20308 20306 20342 ATTTGTCTGAGGAAA GATTTTAATTTTTTTATT AAG AATAAAAAAATTAAAATT AACTATTTATACTAA TERM 28 20376 - 20342 - T 95 -13.4 -3.44848 | opp_overlap 20304 20336 20342, overlap 20308 20306 20340 TTGTCTGAGGAAAGA TTTTAATTTTTTTATT AAG AATAAAAAAATTAAAA TTAACTATTTATACT TERM 29 20342 - 20376 + T 93 -13.4 -3.27121 | opp_overlap 20308 20306 20342 20340, overlap 20304 20336 TTGTCTGAGGAAAGA TTTTAATTTTTTTATT AAG AATAAAAAAATTAAAA TTAACTATTTATACT yjeK 21403 - 20390 - | hypothetical protein efp 21429 - 21992 + | elongation factor P dnaC 22755 - 22015 - | DNA replication protein DnaC dnaT 23255 - 22755 - | primosomal protein I TERM 30 23124 - 23143 + g 100 -5.1 -6.28401 | TTTTAAAGCTTTTGG CTGTATT ACATAA AATACAG TTTTTTTGTTTTTTG TERM 31 24208 - 24247 + G 72 -3.3 -5.41746 | gap 2 AATTTTTTGGTGACA GCATTAGTCGTATTTTTTT ATCA AAAAAAATA-GA-TGATGC TTTTTTTGAGGAATT TERM 32 24707 - 24697 - g 83 -4 -5.90981 | opp_overlap 24697 CTATATCAAAAAAAA TAGA TGT TCTA ATTATTGATACAGCT ftsY 24003 - 25058 + | cell division protein FtsY TERM 33 25243 - 25227 - g 70 -8.1 -3.16144 | overlap 25226 AGATGACCAATAAAG TACAGAT TTT ATCTGTA ACAGCACTAGGTAAT rpoH 25214 - 26071 + | RNA polymerase factor sigma-32 glmS 28051 - 26225 - | glucosamine--fructose-6-phosphate aminotransferase TERM 34 26941 - 26953 + g 75 -3.4 -5.48303 | ATATAGTTAAACTTC CTAG ATAAC CTAG TTTTTTTGAAATTCT TERM 35 27331 - 27345 + g 79 -5.8 -5.04377 | TTATTGATTTATATT TTACAT TAG ATGTAA TTTCTTTTCTTTTAA TERM 36 27370 - 27386 + g 81 -5.3 -5.25976 | opp_overlap 27370 27372 TTTTAATTATAAGAT TATTTTT ATT AAAAATA TTTATTTTTTTGGTT glmU 29500 - 28115 - | UDP-N-acetylglucosamine pyrophosphorylase TERM 37 28776 - 28788 + g 70 -3.5 -5.26316 | AAATCATTAACCTGT TTTTT TCG AAAAA TTTTTTCTAAAATAG yigL 29642 - 30466 + | hypothetical protein metR 31391 - 30453 - | transcriptional activator protein MetR TERM 38 31621 - 31635 + G 78 -4.3 -5.28176 | opp_overlap 31621, overlap 31601 TTACTGGTCTGGAAA TCTTC TATAT GAAGA TTTTTTGTGCGTGGG TERM 39 32557 - 32539 - g 87 -2.5 -6.23317 | overlap 32541 ACAAAAAGAAAAAAA TCTAGAT AAAGA ATCTAAA AAATGGTTTTCTTTT TERM 40 32707 - 32697 - g 70 -4 -5.10077 | AAAGAGTGCAAAAAA TTGA AGT TCAA AACCGTTTATCTGAA TERM 41 33102 - 33083 - g 70 -7.2 -3.53444 | opp_overlap 33081 33083 33084 33086, overlap 33064 33084 TCACGTTGCGTGAAA CCACCAAT TATT ATTGGTGA TGTTAGTCGTTTAAA TERM 42 33084 - 33101 + G 70 -8.5 -2.53273 | opp_overlap 33064 33084 33083, overlap 33083 33081 33086 CACGTTGCGTGAAAC CACCAAT TATT ATTGGTG ATGTTAGTCGTTTAA TERM 43 33101 - 33084 - g 70 -8.5 -2.71924 | opp_overlap 33083 33081 33084 33086, overlap 33064 33083 CACGTTGCGTGAAAC CACCAAT TATT ATTGGTG ATGTTAGTCGTTTAA metE 31532 - 33805 + | 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase TERM 44 33844 - 33898 + T 74 -9.3 -2.78374 | gap 2, opp_overlap 33838 33849 33864 33884, overlap 33849 AAATATAAATTTTAA TTAAATCATCTTTTAGATTATTTTATT AGA AATAAAA-A-TCTAAATGATGATTTAA TAAATTTAATTTTTT purH 35579 - 33999 - | bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase TERM 45 35636 - 35651 + r 75 -3.4 -5.75538 | TATAAATTTTAATAT TTTTTA TATG TAAAAA TTTTTATTTTTTAAA TERM 46 35682 - 35696 + r 100 -11.4 -4.5366 | opp_overlap 35676 AATAGATTACTATTA GGGGCA TAA TGCCCC TTTTGCATTTTTTGG hupA 35993 - 35721 - | DNA-binding protein HU-alpha TERM 47 36204 - 36188 - R 76 -6.7 -4.53077 | opp_overlap 36193, overlap 36193 CGAAAACAAAAAAGA TTAACTT TTA AAGTTAA AATATATAATATATC TERM 48 36411 - 36446 + r 72 -8.4 -3.12437 | overlap 36410 36413 36440 GAAATGCTATTTTTC CATATTTTGGCTGCTT TTAA GAGCAGCCATAATATA ATTATTTTAAAATTA TERM 49 36413 - 36444 + r 89 -11 -3.10981 | overlap 36411 36410 36440 AATGCTATTTTTCCA TATTTTGGCTGCTT TTAA GAGCAGCCATAATA TAATTATTTTAAAAT rpoC 40704 - 36463 - | DNA-directed RNA polymerase subunit beta' TERM 50 37707 - 37733 + g 72 -7.4 -3.82592 | opp_overlap 37703 37712, overlap 37703 37712 TAGCCATAATAGCTC CATAAGGAACTT TAT AAGTTTCTTTTG TTCTTCTAAAATTAT TERM 51 37712 - 37728 + g 79 -5.9 -4.95547 | opp_overlap 37703 37712, overlap 37703 37707 ATAATAGCTCCATAA GGAACTT TAT AAGTTTC TTTTGTTCTTCTAAA TERM 52 38891 - 38907 + g 70 -2.3 -5.52986 | opp_overlap 38893, overlap 38893 CGATAGCAAGTATTT AACATTT TAG AAATGTC TTTTTTTCCTAAAGT TERM 53 39453 - 39441 - G 72 -6.3 -4.21194 | GTGCACGATTCAAAA GAACA GGA TGTTC TCGAATAACTTCGTC rpoB 44801 - 40773 - | DNA-directed RNA polymerase subunit beta TERM 54 44850 - 44868 + r 86 -4.6 -5.95286 | overlap 44844 ACTAAAATGGTCTTT CTGTCT GAAGGAG AGACAG TTTTTTATTTTTAAT TERM 55 44967 - 44941 - R 76 -7.3 -4.3586 | opp_overlap 44941, overlap 44942 TTATTCATATCAAAA CGGCTGGTG AATTAAAAA CACCAGCCA TAATATGAATGCTAA TERM 56 44966 - 44942 - R 73 -8.6 -3.21034 | opp_overlap 44941, overlap 44941 TATTCATATCAAAAC GGCTGGTG AATTAAAAA CACCAGCC ATAATATGAATGCTA rplL 45396 - 45007 - | 50S ribosomal protein L7/L12 TERM 57 45269 - 45285 + g 83 -3.7 -5.86332 | GTATTGACAGACATG TTTGCAG AGA CTCCAAA TTTTTTTTCCATTGC TERM 58 45440 - 45453 + r 82 -6.7 -5.19003 | opp_overlap 45437 45440 CATCAAAAATAATAA CCTCT TTTA AGAGG TTTCTTTTTTCTCTT TERM 59 45453 - 45440 - R 74 -6.7 -4.33997 | opp_overlap 45440, overlap 45437 CATCAAAAATAATAA CCTCT TTTA AGAGG TTTCTTTTTTCTCTT rplJ 45943 - 45446 - | 50S ribosomal protein L10 TERM 60 45625 - 45635 + g 93 -2.6 -6.3578 | CAGCTCCTGTAATTT TAAA TTT TTTA TTTTTTTTTTCAAAT TERM 61 45788 - 45769 - G 74 -5.1 -4.80455 | opp_overlap 45769 TAGCTAAAGATAAAA GAGTATT TCGAAC AATACTC ATTTTAACACCGATT rplA 46886 - 46191 - | 50S ribosomal protein L1 rplK 47316 - 46888 - | 50S ribosomal protein L11 nusG 47889 - 47344 - | transcription antitermination protein NusG secE 48277 - 47894 - | preprotein translocase subunit SecE TERM 62 48374 - 48392 + r 73 -9 -2.55017 | overlap 48373 48387 48391 TTTTTTATTCTTTTC TCTACATA CTA TATGTAGA ATCTATATTCTTTTA TERM 63 48630 - 48646 + r 80 -10.9 -2.65264 | overlap 48632 TTGAACTGGGGACCT CACCCTT ACC AAGGGTG TGCTCTACCTACTGA TERM 64 48699 - 48671 - R 74 -9.1 -2.64933 | TACTGAGCCATATCA GCTGAAAAAAATT AAA AATTTTTTTGAGC GGGCAGCGGGAATTG murB 50112 - 49078 - | UDP-N-acetylenolpyruvoylglucosamine reductase TERM 65 49418 - 49443 + g 100 -4.1 -6.62203 | overlap 49421 AAAAAACTACCTGCA TTTCCTAATTT TTTA AGATTAGGTAA TTTTTTTTTTCTTAT TERM 66 49492 - 49502 + g 78 -2.6 -5.85011 | TATTTTATAAGCATT TATT TCT AATA TTTTTTTACTTTTTA TERM 67 49536 - 49546 + g 100 -2.4 -6.60239 | opp_overlap 49536, overlap 49525 GTGATGAAAAAATAA CAGG TTT CCAG TTTTTTTTTATTTTT TERM 68 50130 - 50150 + H 74 -7.1 -4.14764 | overlap 50140 AGTTTTAACGTAGTT TTTTTATTT TTT AAATAAAAA TTTAATTCTTTAAAC metF 50249 - 51127 + | 5,10-methylenetetrahydrofolate reductase argE 52305 - 51160 - | acetylornithine deacetylase TERM 69 52134 - 52144 + g 71 -2.6 -5.59879 | TATTGAATTTATTTG TATT TGG AATA TTTTTTATGTTTATC TERM 70 53317 - 53328 + G 72 -4.4 -4.98436 | TAGTATTAAAGCTGT GGTA AAAT TACC TTTTTGTGATATTGG argC 52469 - 53473 + | N-acetyl-gamma-glutamyl-phosphate reductase argB 53489 - 54265 + | acetylglutamate kinase argG 54294 - 55499 + | argininosuccinate synthase TERM 71 56015 - 56030 + G 72 -3.2 -5.31855 | ATACTCATTTGCAGC GTGCTC AACC GATCAC TTTTTCTTATTGGTG argH 55540 - 56919 + | argininosuccinate lyase TERM 72 56988 - 56964 - f 80 -10.2 -3.39668 | opp_overlap 56963 56952, overlap 56956 TTTTAAATTTTATAA GGCATTTAAA TTTTT TTTAAATGCC GTAATTAAAATTTAT TERM 73 57047 - 57064 + F 71 -2.1 -5.73978 | gap 1, opp_overlap 57051, overlap 57051 AAATAGGATTTTTAT TATATGCA AGA TGCAT-TA TTTTTTATTTCTAAT TERM 74 57051 - 57061 + G 74 -5.4 -4.9072 | opp_overlap 57051, overlap 57047 AGGATTTTTATTATA TGCA AGA TGCA TTATTTTTTATTTCT yibN 57050 - 57493 + | hypothetical protein TERM 75 57492 - 57478 - f 78 -4.4 -5.76949 | TACTTTTAAAAAAAA TATTTT TTT AAAATA AACTATTAAAATTAA TERM 76 57596 - 57614 + G 73 -6.8 -4.03234 | opp_overlap 57596 57599 AAATTAAAAAAAAAA TCTTTTGA AAT TCAAAGGA TTTATATAAGAGACG TERM 77 57614 - 57596 - g 100 -4.6 -6.50278 | opp_overlap 57596, overlap 57599 AAATTAAAAAAAAAA TCTTTTGA AAT TCAAAGGA TTTATATAAGAGACG secB 57569 - 58033 + | preprotein translocase subunit SecB TERM 78 58679 - 58669 - g 70 -5.4 -4.62302 | opp_overlap 58669 TAATACCGGTAAAAA TAGG CAT CCTA TAATTAGAAAAAACG cysE 58127 - 58879 + | serine acetyltransferase TERM 79 58869 - 58855 - T 78 -5.8 -5.20606 | overlap 58849 58857 AAATAGTAATAAAAA TCTTTT TCA AAAAGA AAAAAAATAATTTAA rpoD 60901 - 59048 - | RNA polymerase sigma factor RpoD TERM 80 59925 - 59935 + g 77 -5.4 -5.01732 | GACCAAGATTGATTT GAAC TTT GTTC TTTTTTAAACCAATT TERM 81 59965 - 60000 + g 93 -10.8 -4.36127 | opp_overlap 59978, overlap 59963 59967 TTTGATCAGTTTCTT TTCCTGAAAAAATTTT TAAG AAAATTTTTTTAGGGA TTTTGCATTCTTCAA TERM 82 59967 - 59998 + g 83 -11.2 -2.51849 | opp_overlap 59978, overlap 59963 59965 TGATCAGTTTCTTTT CCTGAAAAAATTTT TAAG AAAATTTTTTTAGG GATTTTGCATTCTTC dnaG 62754 - 61015 - | DNA primase TERM 83 61615 - 61594 - G 76 -8.1 -3.6869 | TACACTAAGGTGAAA CTTATCATC ATCA GATGACAAG TCAACGTTTTTTAAA TERM 84 61668 - 61686 + g 78 -3.2 -5.81032 | overlap 61670 ACATAGTAAGAGCGT TGTCAATT CGT AATTGAAA TTTTTTTTGGCCTTC TERM 85 61744 - 61756 + g 83 -3.5 -5.94713 | ATTATTAGGTAATAT TATAA ATT TTATA TTTTTTTTGTCAGAT TERM 86 62773 - 62809 + r 81 -3.8 -6.20267 | opp_overlap 62774 62779 62780 62781, overlap 62781 TTTTTATATGGTAGA ATAAAATTCCGTTCTT AAGTA AAGAACGGTTTTTTAA TTTTTTTATTTTTAA TERM 87 62781 - 62801 + r 100 -9.8 -5.62552 | opp_overlap 62780 62779 62774 62781, overlap 62773 TGGTAGAATAAAATT CCGTTCTT AAGTA AAGAACGG TTTTTTAATTTTTTT TERM 88 62801 - 62781 - R 78 -9.8 -2.67008 | opp_overlap 62781 62773, overlap 62780 62779 62774 TGGTAGAATAAAATT CCGTTCTT AAGTA AAGAACGG TTTTTTAATTTTTTT rpsU 63048 - 62833 - | 30S ribosomal protein S21 TERM 89 63134 - 63116 - H 74 -9 -2.71483 | opp_overlap 63119 63130, overlap 63119 ATATTTTTTGAATTA TAAGATAG ATC CTATCTTA ATTAAGATTATTTTG TERM 90 63421 - 63388 - g 71 -6.9 -3.93371 | opp_overlap 63388, overlap 63386 TCAAAAAAAAATACA TGCTAATTATGGA GGTATTAT TCCAGAATTAGCA TCTCGTGAACATACA TERM 91 64134 - 64148 + G 79 -3.6 -5.66229 | overlap 64135 ACATGATGGAAAACG TTTTTC ATG GAAAAG TTTTTTATTCTTCAT gcp 63281 - 64294 + | O-sialoglycoprotein endopeptidase TERM 92 64322 - 64332 + T 78 -2.6 -6.07374 | TTTAACAATTTCTTT TTTT TAT AAAA TTTTTTATTTTTTAT ribB 64978 - 64337 - | 3,4-dihydroxy-2-butanone 4-phosphate synthase TERM 93 64609 - 64620 + g 79 -5.8 -4.94902 | TAGGTTGAGCATCAT CTGC TGTA GCAG TTTTTATAGTAGTTA TERM 94 65126 - 65165 + r 74 -9 -2.8012 | opp_overlap 65161, overlap 65125 65124 TTATTGTATATCTTA TTTTATACCTAAGTATTA CAAA TAATATTTAGATATAAAA GTATTTTAAAAATTT TERM 95 65237 - 65208 - R 91 -5.3 -6.10295 | opp_overlap 65209, overlap 65209 65223 TTAATATAAAAAAAA TTTAATAAAATTT AATT AAATTTTATTAAT TTAAAAAATATATTA TERM 96 65209 - 65236 + r 76 -8.8 -3.57387 | opp_overlap 65209 65208 65223 TAATATAAAAAAAAT TTAATAAAATTT AATT AAATTTTATTAA TTTAAAAAATATATT TERM 97 65236 - 65209 - R 81 -8.8 -4.23737 | opp_overlap 65209, overlap 65208 65223 TAATATAAAAAAAAT TTAATAAAATTT AATT AAATTTTATTAA TTTAAAAAATATATT rfaE 66197 - 65253 - | ADP-heptose synthase TERM 98 65902 - 65926 + g 70 -7.3 -3.49858 | ATTGTTTTATTTTTT TTTATACTGAT TAA ATCAGGATAAA TTCTGGTATGATTAA TERM 99 66257 - 66280 + H 72 -7 -4.18164 | AAAATATATAGTGTC TTAAAAAAAT GAGT ATTTTTTTAA TTATTTTACAAAATT TERM 100 66319 - 66341 + H 74 -8 -3.64685 | opp_overlap 66317 AAAAATTATTTAATT TTTTTTATAT ATT ATATAAAAAA TTATTACAAGATTTT TERM 101 66399 - 66416 + H 72 -5.7 -4.80167 | overlap 66407 AATATATTTTATTTT TTCTATT ATAG AATAGAA TTTTACTTTTTAGTA TERM 102 66569 - 66586 + G 83 -4.9 -5.47218 | opp_overlap 66571, overlap 66571 AAAATTTTCAACAAG TAGGAAA AGAT TTTCCTG TTTTTTTACATCCAG cca 66445 - 67683 + | tRNA CCA-pyrophosphorylase bacA 68484 - 67690 - | bacitracin resistance protein TERM 103 68426 - 68463 + g 73 -8.7 -3.17146 | opp_overlap 68424, overlap 68437 68439 ACAGGAAAAAATTCT GTTATTCCTTGTATTAT TCCT ATAATAATAGGAATAAC TATCTTATGAAAAAA TERM 104 68439 - 68462 + g 75 -9.8 -2.50074 | opp_overlap 68424, overlap 68426 68437 CTGTTATTCCTTGTA TTATTCCTAT AATA ATAGGAATAA CTATCTTATGAAAAA TERM 105 68531 - 68511 - R 74 -7.6 -4.13945 | opp_overlap 68511 68505 ACCTTGATGTTAAAA CGGTACTA AATAA TAGCACCG TTTTTATATTAAAAA TERM 106 68511 - 68531 + r 74 -5.4 -5.0916 | opp_overlap 68511, overlap 68505 ACCTTGATGTTAAAA CGGTACTA AATAA TAGCACCG TTTTTATATTAAAAA crr 69050 - 68547 - | glucose-specific PTS system component ptsI 70818 - 69106 - | phosphoenolpyruvate-protein phosphotransferase TERM 107 70514 - 70524 + g 74 -5.4 -4.78442 | overlap 70507 70506 ATGAATTTTGTTGCT TCTG CAG CAGA TATTTTTTTTTCTGT TERM 108 70600 - 70611 + g 82 -4.4 -5.63517 | CATTATATGACCTTC GAAG ATAC CTTC TTTTTTCTTTCCAAA ptsH 71219 - 70962 - | phosphocarrier protein Hpr TERM 109 71297 - 71352 + r 88 -6.7 -5.58074 | opp_overlap 71300, overlap 71300 71333 TAATTTAAAATATTA AAATACAACTTTTATAATAAAAA TTAATTTATT TTTTTATTAAAAAAGTTGTATTA TTTTTTTAATAATTG TERM 110 71349 - 71300 - R 87 -8.4 -4.55826 | opp_overlap 71300 71297 71333 TTTAAAATATTAAAA TACAACTTTTATAATAAAAA TTAATTTATT TTTTTATTAAAAAAGTTGTA TTATTTTTTTAATAA TERM 111 71300 - 71349 + r 89 -8.4 -4.8487 | opp_overlap 71300, overlap 71297 71333 TTTAAAATATTAAAA TACAACTTTTATAATAAAAA TTAATTTATT TTTTTATTAAAAAAGTTGTA TTATTTTTTTAATAA cysK 72326 - 71358 - | cysteine synthase A TERM 112 72452 - 72474 + H 74 -8 -3.59627 | opp_overlap 72451 72468 ATTCATCAGAACAGT TTATTTATAT AAA ATATAAATAA TTTAAAAAATTTAAT TERM 113 72476 - 72488 + H 85 -3.5 -6.37666 | opp_overlap 72468 72476 TAAAATATAAATAAT TTAAA AAA TTTAA TTTTTTTTATTTTGT TERM 114 73053 - 73043 - H 75 -2.6 -5.98781 | CAGAATTAAAAAAAA TTTT GAT AAAA GTCAATTGATAAATT TERM 115 73329 - 73295 - H 73 -7.4 -3.9941 | opp_overlap 73300, overlap 73300 TTTTTTAGAATTAAA TAAAACATTATTTCTT GAT AAGAAAAAATGTTTTT CTAATCCTAGAAATG TERM 116 73324 - 73300 - H 81 -7.3 -5.02357 | opp_overlap 73300, overlap 73295 TAGAATTAAATAAAA CATTATTTCTT GAT AAGAAAAAATG TTTTTCTAATCCTAG TERM 117 73300 - 73324 + H 81 -7.3 -4.93296 | opp_overlap 73300 73295 TAGAATTAAATAAAA CATTATTTCTT GAT AAGAAAAAATG TTTTTCTAATCCTAG TERM 118 73648 - 73638 - H 80 -4 -6.02345 | GAATTACAAAAAAAA TTAG GTT CTAA TAATAAATTCCCTAG TERM 119 73935 - 73923 - H 80 -4.9 -5.5604 | overlap 73925 GTAATTAAGAAAAAA GATTT TGA AAATC AAAAAAAAATAATTT TERM 120 75495 - 75482 - g 79 -3.8 -5.72207 | TCTAAAGGAAAAAAA CCAC GATACA GTGG AATTTGTAGAAATTT TERM 121 76317 - 76300 - g 72 -4.3 -5.0538 | TTTTATTTTAAAAAA TTTATAT AAGA ATATAAA AAAAATATCTATTTG gltX 75095 - 76552 + | glutamyl-tRNA synthetase fliE 77377 - 77072 - | flagellar hook-basal body complex protein FliE TERM 122 78119 - 78103 - g 82 -8.1 -4.35926 | ATTTTAAATTTAAAA TCTAATC AAG GATTAGA TCATAGTCAAGTTAA TERM 123 78979 - 79001 + G 86 -2.1 -6.22691 | overlap 78981 78991 ATTTCTCTTTTCTTT CTTTTTTTT CTTGT AAAAAAATG TTTTTTTTCTTCTTC fliF 77554 - 79224 + | flagellar MS-ring protein fliG 79221 - 80216 + | flagellar motor switch protein FliG TERM 124 80674 - 80654 - g 71 -8.5 -3.03203 | opp_overlap 80653 80652 80649 TTATTAATAATGATA GTTTTTTTT TGA AAAAAAAAC AGTTAATTATTCATC TERM 125 80716 - 80704 - g 79 -3.5 -5.64873 | CCTAATAACAAAAAA TTTTT AGA AAAAA TAATAAAAAATTCTG fliH 80209 - 80874 + | flagellar assembly protein FliH TERM 126 81882 - 81870 - g 72 -7.7 -3.78234 | ACTGAAAGTGAAGAA GATCC GCA GGATC CAATTGCTCACATTT fliI 80868 - 82235 + | flagellum-specific ATP synthase TERM 127 82215 - 82235 + F 72 -2.7 -5.79595 | opp_overlap 82215 TCTTCTTGCGAAGAA TTAAATCAA ATA TTTATTTAA TTTTTTATTTTAGAA TERM 128 82556 - 82542 - g 86 -3.6 -6.11019 | AAAAATTAAAAAAAA TCAAAA AAT TCTTGA AAAAAGTTTAAAACA fliJ 82270 - 82728 + | flagellar FliJ protein TERM 129 82767 - 82733 - g 72 -8.8 -2.62935 | overlap 82732 82730 82760 ATAATGTTTAAATAT TCTGATAATATTGCTT TAG AAGGAAAATTATCAGA TAATCAAAATAATAA TERM 130 83059 - 83047 - g 73 -3.5 -5.30448 | AAATAAAGACAAAAA TTTTA AAT TAAAA AAATATATAAAACTA TERM 131 83561 - 83521 - g 77 -4.9 -5.20222 | ATCAAATAAAGAAAA TAAAGCAGAAATATCCT TTACACC AGAATATCTCGGCTCTA TACATATAAAAATCA fliK 82721 - 83866 + | flagellar hook-length control protein TERM 132 84840 - 84817 - g 86 -4 -6.02914 | opp_overlap 84838 TGTATAGAAAAAAAA CCTATATTTT TAGG AAAACATAAG ATTTTTGATGAAAAA fliM 83971 - 84906 + | flagellar motor switch protein FliM fliN 84923 - 85324 + | flagellar motor switch protein FliN TERM 133 85516 - 85494 - g 71 -2.8 -5.59962 | GAAAATAAATAAAAA CAATTATTTT ATA AAAACTATTG ATAGAATGTCTCTTG TERM 134 86150 - 86140 - g 71 -2.6 -5.52384 | GTTCCATTAAAAAAA TTTA TGT TAAA TCAAACACGAAATTC fliP 85330 - 86469 + | type III secretion system protein fliQ 86513 - 86785 + | flagellar biosynthetic protein FliQ TERM 135 86896 - 86936 + G 70 -3.5 -5.14563 | opp_overlap 86901, overlap 86901 TTTAATGATCAAAAT GTAAATAAAAAAGTTAAAA TAA TCTTATCTTTTTTAATTGC TTTTTTAATAAAACC fliR 86785 - 87561 + | flagellar biosynthetic protein FliR TERM 136 87635 - 87667 + T 78 -9.5 -3.55548 | opp_overlap 87636 87640, overlap 87636 87640 TTTTTCATTTCTAAA ATAAAGTATAATTTT TAT AAAATTATACTTTAA TTTAAAAAAATATTA TERM 137 87666 - 87636 - T 100 -13 -4.11216 | opp_overlap 87635 87636 87640, overlap 87640 TTTTCATTTCTAAAA TAAAGTATAATTTT TAT AAAATTATACTTTA ATTTAAAAAAATATT TERM 138 87636 - 87666 + T 91 -13 -2.73007 | opp_overlap 87636 87640, overlap 87635 87640 TTTTCATTTCTAAAA TAAAGTATAATTTT TAT AAAATTATACTTTA ATTTAAAAAAATATT TERM 139 87640 - 87662 + T 83 -9.4 -4.05788 | opp_overlap 87636 87640, overlap 87636 87635 CATTTCTAAAATAAA GTATAATTTT TAT AAAATTATAC TTTAATTTAAAAAAA TERM 140 87662 - 87640 - T 89 -9.4 -4.65933 | opp_overlap 87640 87636 87635, overlap 87636 CATTTCTAAAATAAA GTATAATTTT TAT AAAATTATAC TTTAATTTAAAAAAA rpmG 87857 - 87690 - | 50S ribosomal protein L33 rpmB 88099 - 87863 - | 50S ribosomal protein L28 TERM 141 88008 - 88020 + g 85 -4.1 -5.86332 | TGATATTGAATATTT GGTAA AAA TTGCC TTTTTTTTGCATTCA TERM 142 88170 - 88154 - H 70 -6.7 -4.00042 | opp_overlap 88156, overlap 88158 88162 TTTTTTATTAAATAA TATACTA ACA TAGTATA AATTACTATAATAGT TERM 143 88598 - 88588 - g 83 -4 -5.86609 | opp_overlap 88588 TGAAAAAAATAAAAA CAAA GAA TTTG GTTATTTCATTCAAT TERM 144 88660 - 88646 - g 73 -5.8 -4.62085 | overlap 88633 AGCTTTAAAAAATAA TTTTCT AAA AGAAAA AAAAATAAAAAATAC TERM 145 88686 - 88666 - g 100 -2.7 -6.55664 | opp_overlap 88676 TAAAAGAAAAAAAAA TAAAAAATA CTA TTTTTTTTA AACATTCATTAATTT TERM 146 88926 - 88939 + G 83 -3.9 -5.91981 | opp_overlap 88926 TACAGAAACAAAATA GATAA TGCT TTATC TTTTTTTTCAATTTT TERM 147 89090 - 89078 - g 93 -3.5 -6.23209 | overlap 89080 TCAATTAAAAAAAAA TATTT TAA AAATA AAAAAAATTCAAATA TERM 148 89404 - 89431 + G 70 -8 -3.26205 | opp_overlap 89402 89404 89422 89428, overlap 89402 89402 89399 89428 TAAGTTCAAAAAATT TTAATTTTTCTT TAAA AGGAAAAATTAA TAATTATTTTTTATC TERM 149 89470 - 89422 - g 74 -8.8 -3.04517 | gap 1, opp_overlap 89404 89402 89402 89399 89428 89436, overlap 89404 89402 89428 89456 ATTTTTCTTTAAAAG GAAAAATTAATAATTATTTTTTA TCAT TAAAAAATA-TTATTAATATTTC AGGTATGCCATCTTT TERM 150 89464 - 89428 - g 82 -6.4 -5.0925 | gap 1, opp_overlap 89404 89402 89402 89399 89428 89436, overlap 89404 89402 89422 89456 CTTTAAAAGGAAAAA TTAATAATTATTTTTTA TCAT TAAAAAATA-TTATTAA TATTTCAGGTATGCC TERM 151 89593 - 89580 - g 71 -2.5 -5.48054 | overlap 89573 ATTAAAACTAAAAAA TTTAT AAAA ATAAA AAAAGAAATAGATTA TERM 152 90370 - 90356 - g 85 -4.4 -5.95449 | opp_overlap 90356 AAAGAAAATAAAAAA TAAAAA TGC TTTTTA TTCTGCTATTAATAA ytfN 88296 - 91202 + | hypothetical protein ppa 91736 - 91194 - | inorganic pyrophosphatase pmbA 91921 - 93264 + | hypothetical protein TERM 153 93292 - 93322 + T 85 -6.5 -5.42198 | gap 1, opp_overlap 93284 93285 93298, overlap 93293 93298 AAATAAATTTTTTAG TA-AAAAGGTAATA AATT TATTACCTTTTATA TTTTATTTTTTAAGA TERM 154 93293 - 93320 + T 74 -7.2 -4.32882 | opp_overlap 93284 93285 93298, overlap 93292 93298 AATAAATTTTTTAGT AAAAAGGTAATA AATT TATTACCTTTTA TATTTTATTTTTTAA TERM 155 93298 - 93315 + T 81 -7.1 -5.00136 | opp_overlap 93298, overlap 93293 93292 ATTTTTTAGTAAAAA GGTAATA AATT TATTACC TTTTATATTTTATTT TERM 156 93315 - 93298 - T 80 -7.1 -4.7254 | opp_overlap 93298 93293 93292 ATTTTTTAGTAAAAA GGTAATA AATT TATTACC TTTTATATTTTATTT TERM 157 93509 - 93527 + T 74 -7.4 -4.17089 | TGTTGCCAATTATGC GGTGTGCT CTT ACCACACC TTTTCACCCTTTCCC TERM 158 93693 - 93675 - T 87 -10.4 -4.11216 | overlap 93683 TCTTTAGTTTTAAAA CTAAACAG CGA CTGTTTAG TCAACTTCAAAATAA yraL 94594 - 93737 - | hypothetical protein TERM 159 93765 - 93776 + g 100 -3 -6.55664 | TCTTTTATTGCATGT TGAT ATAA ATCA TTTTTTTTTATTTTA TERM 160 94641 - 94629 - H 85 -3.5 -6.36459 | overlap 94636 TGTAATAAAAAAAAA TAATA ATT TATTA TATAAGTAATATTAA TERM 161 94901 - 94889 - g 83 -3.5 -5.86976 | overlap 94882 94890 TTAGAAAATAAAAAA TTTTT TAA AAAAA ATAAAATCTCTCGTT TERM 162 95017 - 95005 - g 78 -3.4 -5.6473 | opp_overlap 95005 ACAATATCAAAAAAA TCCA CGTAT TGGA ATTATTGCTGGTTCT TERM 163 95369 - 95400 + G 71 -6 -4.53163 | gap 1, opp_overlap 95370, overlap 95364 95370 95381 AAAAATCCTACTAAA TCATCGCGTGTTTAT GAT GTAAAC-CGTGATGG TTTTGTCATATCTGG fabB 94715 - 95938 + | 3-oxoacyl-[acyl-carrier-protein] synthase I TERM 164 96677 - 96663 - g 88 -5.7 -5.27779 | TTTAATATTAAAAAA TCCTG CTGAT CAGGA TCCAGGTGTCTTATC tal 96082 - 97032 + | transaldolase B TERM 165 97871 - 97888 + G 71 -8.5 -2.89655 | overlap 97870 TGATTCTCATGGTGC TCCTCTT GGAG AAGAGGA AATTTTTTTAACGCG TERM 166 98513 - 98468 - g 70 -8.5 -2.74597 | gap 1, overlap 98465 TGTATATACACATGA TTCTATTGGATTAGGTG-AGGA TGG TCCTACACATCAACCAATAGAA CAATTAGCAAATTTA TERM 167 98755 - 98727 - g 79 -6.1 -5.06451 | TATGATTCTAAAAAA CCTATCGATATCA TTT TTATATCAACAGG TTCTGAATTACAAAT tkt 97083 - 99080 + | transketolase dapE 99143 - 100297 + | succinyl-diaminopimelate desuccinylase TERM 168 100565 - 100581 + T 70 -8.1 -3.23795 | overlap 100562 TAAGTTCATTATTCT CATTCTT AAA AAGAATG TCATTATTTTTTAAG dapA 101547 - 100663 - | dihydrodipicolinate synthase TERM 169 101264 - 101276 + g 74 -4.9 -5.07486 | CATGCTTCAATTCCT GATTT TTC AAATC TTTTTGTTAAGGATA bcp 101886 - 102362 + | thioredoxin-dependent thiol peroxidase aroC 103527 - 102466 - | chorismate synthase TERM 170 103600 - 103581 - H 100 -5.2 -6.32216 | opp_overlap 103593, overlap 103593 ATACAGAAAAAAAAA TAAAAAAA ATAA TTTTTTTA TCTAAAAAAATATTT TERM 171 103904 - 103923 + G 73 -3.7 -5.40072 | opp_overlap 103900 103922, overlap 103901 103922 CATAGTAATTATTTT TCTTTTT ATAAAA AAAAAGA TTTTTTTAAAGAAAA TERM 172 103940 - 103922 - g 93 -3.2 -6.22802 | opp_overlap 103904 103922 103924 TTTTATAAAAAAAAA GATTTTTT TAA AGAAAATC CTGTGTCTTATGTTC Y098 103730 - 104260 + | hypothetical protein TERM 173 104344 - 104364 + F 72 -2.7 -5.77571 | opp_overlap 104344, overlap 104337 ATTAATTTTTTAAAC TTTAAATAA ATT TTATTCAAA TTTTTGTTTTTTAAT TERM 174 105357 - 105335 - g 86 -7 -4.9218 | CATGGAGCAGAAAAA CCGACTATTT TAA AATTAGCCGG AGATGATCATCGTGT hisG 104585 - 105484 + | ATP phosphoribosyltransferase hisD 105492 - 106799 + | histidinol dehydrogenase TERM 175 107793 - 107779 - g 79 -5.8 -5.09245 | opp_overlap 107779 TCAAAATCATAAAAA CAATTT GAA AAATTG TTTAAGAATATCAAT hisC 106796 - 107863 + | histidinol-phosphate aminotransferase TERM 176 108068 - 108054 - g 82 -8.6 -3.87815 | TGTTATGGTGACAAA CCAAGA TGG TCTTGG CAGTAAATCATTTCC hisB 107890 - 108957 + | imidazole glycerol-phosphate dehydratase/histidinol phosphatase TERM 177 109303 - 109283 - g 76 -6.2 -4.58395 | CGCATCTTTTAAAAA GCAGTAAT TTACC ATTACCGC ATATGGGTTGGAATC hisH 108958 - 109551 + | imidazole glycerol phosphate synthase subunit HisH hisA 109558 - 110292 + | 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase hisF 110274 - 111050 + | imidazole glycerol phosphate synthase subunit HisF hisI 111044 - 111667 + | bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase protein TERM 178 111759 - 111743 - f 76 -6.7 -4.56597 | opp_overlap 111743 TTGTTTTTTTAAAAA TATTGTT TTG AACAATA TTTAACTTATATACA TERM 179 112105 - 112093 - g 74 -2.7 -5.63504 | AATTGGAGAAAAAAA TGTTA AAG CAACA AGTTGGTGTTATAGG TERM 180 112822 - 112799 - g 79 -4 -5.72254 | opp_overlap 112799, overlap 112789 112801 TGAAATAACAAAAAA TATTTTTCTT AAAA AAGAAAAAGA TGGTATTCATTATTT TERM 181 112820 - 112801 - g 74 -6.6 -4.47161 | opp_overlap 112799, overlap 112789 112799 AAATAACAAAAAATA TTTTTCTT AAAA AAGAAAAA GATGGTATTCATTAT gnd 112092 - 113513 + | 6-phosphogluconate dehydrogenase TERM 182 114146 - 114173 + G 70 -6.5 -4.12198 | gap 1, opp_overlap 114140 ATAAAAATTGCAGCA CTGAGTTTTGAA TTACT TTCAAAAC-CAG TTTTACGACCTTATA dcd 113675 - 114256 + | deoxycytidine triphosphate deaminase metG 114350 - 115987 + | methionyl-tRNA synthetase TERM 183 116047 - 116037 - T 75 -4 -5.62288 | opp_overlap 116037 TTAATAAAATAAAAA GAAA TTT TTTC TATTAAAATGTACGT mesJ 117359 - 116022 - | putative cell cycle protein MesJ TERM 184 116193 - 116177 - G 70 -3.7 -5.20781 | TATTATAAAATAAAA GAGGAAT TTT ATTTCTC AACCAAGGAGGTATA TERM 185 116975 - 116996 + g 77 -8.9 -3.41936 | overlap 116974 CAGTTGGTCCACTTC CTCTTTTTA AAGA TAAAAAGAG TGTTTCACATTGATC ribE 117605 - 118231 + | riboflavin synthase subunit alpha TERM 186 118290 - 118312 + G 77 -5 -5.13722 | overlap 118286 TACTTTTTTTTTATT TTATCAAATA TAT TAATTGATAA TTTTATTTTAGTAAA rnfA 118266 - 118847 + | hypothetical protein ydgM 118850 - 119356 + | putative ferredoxin-like protein TERM 187 119457 - 119444 - f 71 -2.5 -5.72622 | overlap 119437 TTTATAAATAAAAAA TTTTT AAAT AAAAA AAAAATATAATTTTA TERM 188 120507 - 120491 - f 72 -3.1 -5.80817 | overlap 120493 120497 TTCAATACAAAAAAA CATAAAT TGT ATTTATA CAAAAAATAAAAAAA ydgO 121037 - 122086 + | hypothetical protein TERM 189 122324 - 122314 - g 83 -4 -5.90981 | opp_overlap 122314 GGAGATCAAAAAAAA CATA ATT TATG GCTTCTTTTTAAAAA TERM 190 122482 - 122468 - g 73 -5.7 -4.56367 | TATCTCATAAAGAAA CTCCA GGAAT TGGAG ATAAAATTGAAATAT TERM 191 122572 - 122560 - g 79 -3.5 -5.63645 | overlap 122553 TTAAAAGATAAAAAA TTTTT ATT AAAAA AGTATGGGGGTAAGA ydgP 122083 - 122691 + | hypothetical protein TERM 192 122900 - 122887 - g 70 -3.9 -5.09426 | TTCAATTTTAAAAAA CTTTA TACC TAAAG ATATTAGAATTCCTA TERM 193 123174 - 123194 + G 100 -8.5 -4.98616 | opp_overlap 123190, overlap 123190 TGGGAAATGGAACTT TTTTATTTG GTG CAAATAAAA TTTTTAATGTTTTAG ydgQ 122708 - 123379 + | SoxR-reducing system protein RsxE TERM 194 123439 - 123459 + G 88 -5.5 -5.59534 | opp_overlap 123438 123439 TTTATAAAAAAAACT CTAATCCTA AGA TAGAATTAG TTTTTTCTTCTGATT nth 123387 - 124016 + | endonuclease III TERM 195 124502 - 124518 + G 77 -5.3 -5.0133 | overlap 124501 124503 TATACTTTTTTTGAT TTTTTTT TAA AAAAAAA TTTTTTGCAAAAATC TERM 196 124531 - 124519 - g 86 -3.5 -6.06723 | opp_overlap 124503 TTTTTTAAAAAAAAA TTTTT TGC AAAAA TCATGTAAAAATTAT TERM 197 124557 - 124532 - g 73 -5.7 -4.57341 | gap 1, opp_overlap 124544 AATTTTTTGCAAAAA TCATG-TAAAAA TTA TTTTTATCATGA AAATATTCCTCATAT TERM 198 124619 - 124601 - g 93 -3.3 -6.23209 | opp_overlap 124582 124602 124612, overlap 124590 124585 124582 124602 124612 TTAATTAAAAAAAAA TTTTTTT TAAAT AAAAAAA TAATTTTTATAATTA TERM 199 125167 - 125149 - g 93 -6.2 -5.33866 | opp_overlap 125157, overlap 125157 TAAATTTATAAAAAA TAAAAAAA CAT TTTTTTTA AAAAATAATGTTATT TERM 200 125177 - 125157 - g 95 -4.1 -6.28401 | opp_overlap 125157, overlap 125149 TAAAAAATAAAAAAA CATTTTTTT TAA AAAATAATG TTATTGATTTAAGAA TERM 201 125589 - 125570 - g 86 -2.3 -6.17669 | opp_overlap 125570 AACAAAACAAAAAAA TTAAAAA TACAAT TTTTTAA ATTTCCTATTTCTAA priA 124043 - 126205 + | primosomal protein N' tyrS 126368 - 127636 + | tyrosyl-tRNA synthetase ydiC 128049 - 127660 - | hypothetical protein TERM 202 127812 - 127834 + g 100 -6.4 -5.70761 | opp_overlap 127811 127812, overlap 127815 TGTATACTAGAATAT TGTTATAGTA AAA TACTATATCA TTTTTATTTTCTTTT TERM 203 128020 - 128033 + g 79 -3.9 -5.63645 | TTTATATTTTTTTGG TGAAT AAAA ATTCA TTTTTTCTATTTTCA ydiK 128277 - 129371 + | putative inner membrane protein TERM 204 129399 - 129389 - f 75 -4 -5.50499 | opp_overlap 129389, overlap 129377 129373 129374 TTATATCTAAAAAAA CATT TTA AATG TTTTTTCATGATAAA TERM 205 129787 - 129766 - f 76 -4.5 -5.31275 | TTTCAGGATAAAAAA TTCATTTAG AGAA CAAAATGAA AAAAACAGATGAACT TERM 206 130044 - 130026 - g 77 -4.6 -5.12617 | opp_overlap 130026, overlap 130028 GAACTACGTAAAAAA TATCAAGA TCG TCTTGAAA TTATAATGCGTACAT TERM 207 130042 - 130028 - g 75 -7.2 -4.1821 | opp_overlap 130026, overlap 130026 ACTACGTAAAAAATA TCAAGA TCG TCTTGA AATTATAATGCGTAC aroH 129783 - 130829 + | phospho-2-dehydro-3-deoxyheptonate aldolase TERM 208 130841 - 130868 + F 91 -10 -5.08601 | overlap 130843 TTAATAATTATTGTG TATGCTAGTCAA AAAT TTGACTAGCATC TTTTTATTAAACTCA TERM 209 130843 - 130866 + F 100 -12.6 -4.16909 | overlap 130841 AATAATTATTGTGTA TGCTAGTCAA AAAT TTGACTAGCA TCTTTTTATTAAACT TERM 210 131045 - 131031 - g 100 -7.2 -5.8901 | opp_overlap 131031 ATAGAAAATAAAAAA CCTAAT ATA ATTAGG TCCCTTATTGCTATT thrS 130947 - 132875 + | threonyl-tRNA synthetase infC 132879 - 133418 + | translation initiation factor IF-3 rpmI 133490 - 133687 + | 50S ribosomal protein L35 rplT 133729 - 134085 + | 50S ribosomal protein L20 TERM 211 134161 - 134177 + F 85 -8 -4.98616 | opp_overlap 134157 134161, overlap 134169 TGTAAAACATACTAA GCTTCC TTTAT GGAAGC TTTTTCATATTTTAA TERM 212 134177 - 134161 - f 72 -8 -3.46304 | opp_overlap 134161 134169, overlap 134157 TGTAAAACATACTAA GCTTCC TTTAT GGAAGC TTTTTCATATTTTAA TERM 213 134404 - 134380 - g 81 -5.2 -5.19916 | opp_overlap 134380 AAAAGATTTAAAAAA TTTTTCTCTT GAAGA AAGAAAAAAA TACTTTATCATTTTT pheS 134240 - 135229 + | phenylalanyl-tRNA synthetase subunit alpha TERM 214 135688 - 135678 - g 78 -2.6 -5.90981 | opp_overlap 135678 CTATAGGAAAAAAAA TAAA CGA TTTA TTTTTATTAAAAAAA TERM 215 136704 - 136687 - g 84 -5.7 -5.13722 | TCCATTAAAACAAAA TTACTAT TTTA ATAGTAA AAATAAAGACTTAAA TERM 216 136724 - 136712 - g 82 -6.3 -4.95618 | opp_overlap 136711 AATAGTAAAAATAAA GACTT AAA AAGTC CCTTATTAGATGAAG pheT 135239 - 137635 + | phenylalanyl-tRNA synthetase beta chain himA 137640 - 137942 + | integration host factor alpha-subunit TERM 217 137932 - 137952 + F 71 -4.9 -4.93365 | opp_overlap 137931 ATTATTTAATGAAGG TTAAATATT AAC GATATTTAA TTTTTACTTGTAAAA queA 138018 - 139091 + | S-adenosylmethionine:tRNA ribosyltransferase TERM 218 139301 - 139291 - g 70 -4 -5.10877 | AGAAGAAATTAAAAA TACT GGT AGTA AAATAATTTTGTCTA TERM 219 139371 - 139361 - g 74 -5.4 -4.90002 | opp_overlap 139361 CAAGATATAATAAAA CTAC ATG GTAG TTTGCATAATTTTAT TERM 220 139883 - 139871 - g 89 -4.1 -6.13 | overlap 139872 ATACCTAAAAAAAAA CCAAG GTA CTTGA TGGGAGTAGGAAAAC TERM 221 139997 - 139979 - g 72 -9 -2.57092 | opp_overlap 139978 139981 AATGCTAGGAATGGA CATTTGTT TGT AACAAATG GTATAATAAAAATCA TERM 222 140053 - 140035 - g 71 -6.1 -4.40478 | CAAATATAAAAAAGA TTTGTCT GTATT AGACAAA AAATGTACTTGTTAT tgt 139148 - 140254 + | queuine tRNA-ribosyltransferase yajC 140289 - 140621 + | hypothetical protein glyS 142789 - 140651 - | glyS: glycyl-tRNA synthetase beta chain TERM 223 142747 - 142757 + gT 78 -2.6 -5.8187 | opp_overlap 142747 TCTCGTTAATTATAA TAAA AAT TTTA TTTTTTTCTTGAATA glyQ 143633 - 142755 - | glycyl-tRNA synthetase subunit alpha TERM 224 142928 - 142940 + gH 76 -3.5 -5.63103 | ATAGCAAAGGTTTTT TTAAT TCT ATTAA TTTTTTTGCTTCAAA folE 143817 - 144473 + | GTP cyclohydrolase I nfo 144620 - 145459 + | endonuclease IV rplY 145504 - 145794 + | 50S ribosomal protein L25 yabI 146599 - 145841 - | hypothetical protein TERM 225 146793 - 146781 - H 72 -3.5 -5.59534 | opp_overlap 146781 146784, overlap 146784 AATTATAACAAAAAA TAATT AAA AATTA ATATTTTGAGAAAAT TERM 226 147087 - 147070 - g 75 -4.3 -5.09762 | TTTTAAGAAATAAAA TAATTAA AAAA TTAATTA CAGAAACTTTAATTT TERM 227 147318 - 147300 - g 75 -9 -3.19038 | opp_overlap 147297 GTTAAAATTATTCAA GATTATGT GTT ACATAATC GCGTTCATATTTCAG TERM 228 147467 - 147437 - g 86 -3.6 -6.14618 | overlap 147463 TATAAAAGAAAAAAA TAAAATTTTTAT TAAAAAT ACAAAAATTTTA GCAGATCATTTTGCC TERM 229 147486 - 147463 - g 72 -3.2 -5.36364 | overlap 147437 TTAAAAATACAAAAA TTTTAGCAGA TCAT TTTGCCAAAA AAATAAAGAAAGATG TERM 230 147509 - 147494 - g 86 -6.2 -5.20328 | TGCCAAAAAAATAAA GAAAGA TGCT TCTTTC AACTATTATTATGAA TERM 231 147810 - 147788 - g 73 -3.6 -5.4148 | opp_overlap 147791 147791, overlap 147791 147806 TAAACAAGCAAAAAA TAGTATATAT TAT ATATATAATA ATATTAAAAACAAAA surA 146862 - 148160 + | survival protein SurA precursor ksgA 148228 - 149052 + | dimethyladenosine transferase TERM 232 149148 - 149170 + G 73 -3.6 -5.31456 | opp_overlap 149148 149162, overlap 149151 TTACTTTTAAAAAAA TCTTTTTT TAATGAT AAAAAAGA TTTTTTATGGATTGC TERM 233 149170 - 149148 - g 73 -3.6 -5.42259 | opp_overlap 149148 149151, overlap 149162 TTACTTTTAAAAAAA TCTTTTTT TAATGAT AAAAAAGA TTTTTTATGGATTGC apaH 149082 - 149903 + | diadenosine tetraphosphatase folA 150423 - 149938 - | dihydrofolate reductase TERM 234 150482 - 150453 - R 95 -11.1 -4.4267 | opp_overlap 150439 150460 150476, overlap 150476 TTTTAAAATTTAAAA TTATAAATATGTT TTAC AACATATTTATAA AAAGTTATAAATTTA TERM 235 150490 - 150520 + r 72 -2.9 -5.68039 | opp_overlap 150476 150490 150495, overlap 150476 ATTTATAAAAAGTTA TAAATTTAATT TTTTTAATT AATTAAATTTA TTTTTTTGTGAATTT carB 153737 - 150504 - | carbamoyl phosphate synthase large subunit TERM 236 152756 - 152770 + g 71 -8.6 -2.96237 | overlap 152755 152754 152758 CTAATGTGTATCCTA CAGCTA ATT TAGCTG CTATTTTTGCAATTG TERM 237 152779 - 152798 + g 77 -8.6 -3.55444 | opp_overlap 152794 TTAGCTGCTATTTTT GCAATTGG AAAA CCAGTTGC TTTAGAAGCTAAAGC TERM 238 152831 - 152821 - G 71 -6.8 -3.93216 | GCTAAAGCAGAAGAA CGAG AAA CTCG CGGATTCATTTCAAT carA 154908 - 153751 - | carbamoyl phosphate synthase small subunit TERM 239 154156 - 154177 + g 83 -10.9 -3.05715 | opp_overlap 154151 AATAGCATAATCGCA TGGTCTTGG ATCA CCAGGACCA TTAGATAGAAAAATT TERM 240 155011 - 155026 + r 72 -3.4 -5.58454 | opp_overlap 155011 TTATCGTAGTAAATA TTTATA TTTT TATAAA TTTTTTTAATATGCA dapB 155867 - 155046 - | dihydrodipicolinate reductase TERM 241 155489 - 155506 + g 71 -2.7 -5.45726 | overlap 155490 CAATACTAAAATTTG ATGCTTT AATT AAAGCAA TTTTTTTAGCATATG lytB 156821 - 155880 - | hypothetical protein TERM 242 156381 - 156400 + g 72 -4.4 -4.93595 | TTGATTAACATCTTC TATATCTT CAAT AAGATGTA TTTTTCCCTTTTTAT TERM 243 156544 - 156558 + g 86 -2.2 -6.24157 | AATGGGCAAGTGGCA TTTAAT ATT GTTAAA TTTTTTTTTATAGCT lspA 157365 - 156895 - | lipoprotein signal peptidase TERM 244 157339 - 157327 - G 73 -3.5 -5.31275 | opp_overlap 157327 TGTTATGATAAAAAA TATAA TAT TTATA TATATCCAATAGTAT ileS 160178 - 157362 - | isoleucyl-tRNA synthetase TERM 245 158711 - 158728 + g 71 -2.7 -5.60993 | overlap 158709 TTAATAAGGTATTTT CAGGA TGAATTTT TCCTG TTTTTTTATGCAGAA TERM 246 158839 - 158853 + g 100 -8.6 -5.09521 | GATCCTCCCCATTTA GGTATC CAT GATACC TTTTTGATTTCTTCA TERM 247 160019 - 160043 + g 81 -2.9 -6.12328 | ATGGAGGTCCATCAT GAAGAAAAAAA ATT TTTTTACCTTC TTTTTTTTGTCTTAT ribF 161145 - 160207 - | riboflavin biosynthesis protein RibF TERM 248 161231 - 161245 + H 72 -4.4 -5.38958 | ATGTATTATTCTTAC TAATAT ATA ATATTA TTTTTATTTATAGAT TERM 249 161260 - 161285 + H 72 -3.5 -5.56264 | opp_overlap 161260 161264, overlap 161264 161276 ATTTTTATTTATAGA TAAATTTTTAA TTTA TTAAAAAATTA TTTTTTATATTTGGG rpsT 161309 - 161578 + | 30S ribosomal protein S20 dnaJ 162771 - 161635 - | DnaJ protein TERM 250 162800 - 162835 + r 79 -9.1 -3.70417 | gap 1, opp_overlap 162800 162803, overlap 162802 CTGCTTTCAAAATAA GTA-CACGGGCGTAGA TTTTT TCTACGCCCGTGCTGG TTTAAATACTCTAAT TERM 251 162834 - 162800 - R 87 -10.7 -4.17048 | opp_overlap 162800 162802, overlap 162803 CTGCTTTCAAAATAA GTACACGGGCGTAGA TTTTT TCTACGCCCGTGCTG GTTTAAATACTCTAA TERM 252 162802 - 162832 + r 100 -15.5 -2.95384 | opp_overlap 162800 162803, overlap 162800 GCTTTCAAAATAAGT ACACGGGCGTAGA TTTTT TCTACGCCCGTGC TGGTTTAAATACTCT TERM 253 162831 - 162803 - R 100 -19 -3.10579 | opp_overlap 162802 162800, overlap 162800 CTTTCAAAATAAGTA CACGGGCGTAGA TTTTT TCTACGCCCGTG CTGGTTTAAATACTC dnaK 164790 - 162874 - | DnaK protein nuoA 165160 - 165540 + | NADH dehydrogenase I chain A TERM 254 166244 - 166211 - g 85 -5.5 -5.31275 | opp_overlap 166211 166218 TGTTATCAGAAAAAA TTCAAAACAGAAA AAAAAGAA TTTCTGTTGTGAA TCTTCCAACTTCAGA nuoB 165598 - 166269 + | NADH dehydrogenase subunit B nuoCD 166375 - 168168 + | bifunctional NADH:ubiquinone oxidoreductase subunit C/D nuoE 168171 - 168677 + | NADH dehydrogenase subunit E nuoF 168674 - 170017 + | NADH dehydrogenase I chain F TERM 255 170049 - 170066 + F 71 -2.1 -5.76949 | opp_overlap 170049 170050, overlap 170050 TTTCTAATATAAAGA TTTTTAT AAAA ATAAAAG TTTTTTTTGGAACTC TERM 256 172095 - 172085 - g 73 -4 -5.33985 | TTGAAAAAAAAGAAA TATC TTG GATA AACTTAGATAATATT nuoG 170089 - 172821 + | NADH dehydrogenase subunit G TERM 257 173263 - 173289 + G 76 -3.9 -5.59564 | gap 2 TAGGTGCGATTCGCG CTTC-T-GCTCAA ACT TTGAGCTATGAAG TTTTTTTAGGTTTAT TERM 258 173390 - 173401 + G 82 -4.4 -5.72118 | TTGGAATGTTATACC CCAA TTCT TTGG TTTTTTATGTTTTTT nuoH 172818 - 173786 + | NADH dehydrogenase subunit H nuoI 173808 - 174350 + | NADH dehydrogenase subunit I TERM 259 174639 - 174654 + G 76 -4 -5.5762 | overlap 174640 ATTTAAATCCTATTT TTTGGA TTGG TCCAAG TTTTTTGTCTTTAAT nuoJ 174365 - 174856 + | NADH dehydrogenase I chain J nuoK 174899 - 175201 + | NADH dehydrogenase I chain K TERM 260 175780 - 175800 + G 71 -4.9 -4.90296 | AATAAATACGGTACT TTTAATTTT CAA GAAATTAAA TTTTTATCAAATTTT nuoL 175198 - 177045 + | NADH dehydrogenase I chain L nuoM 177130 - 178635 + | NADH dehydrogenase I chain M nuoN 178667 - 180127 + | NADH dehydrogenase I chain N TERM 261 180287 - 180303 + G 95 -3.1 -6.38655 | ATAAAAAAAATAAAA TTGTTTT CTA AAAATAA TTTTTTTTTCTATTT ygjT 180194 - 181126 + | hypothetical protein TERM 262 181360 - 181342 - g 72 -3.2 -5.44119 | overlap 181346 CTTATTGCAAAAAAA TTAGGTTT ATT AAACTTAA AATCCTTTTTTTTTA TERM 263 181888 - 181871 - g 100 -5.7 -6.4753 | opp_overlap 181874 CTAAAGAAAAAAAAA CAATTTT AAAA AAAATTG ATGTAGATTGGTTTT folC 181237 - 182493 + | dihydrofolate synthase prsA 184008 - 183061 - | ribose-phosphate pyrophosphokinase ipk 184956 - 184078 - | isopentenyl monophosphate kinase TERM 264 184311 - 184341 + g 75 -9.2 -3.1372 | opp_overlap 184300 184314 184326, overlap 184309 TAAATTTTTTTTTAA TTACGTTTTCAAAA TCG TTATGAAAACGTGA TCTTAATAAAAAATC TERM 265 184338 - 184314 - G 70 -8.7 -2.71011 | opp_overlap 184311 184309, overlap 184300 184326 ATTTTTTTTTAATTA CGTTTTCAAAA TCG TTATGAAAACG TGATCTTAATAAAAA TERM 266 185519 - 185531 + G 71 -4.8 -4.91109 | opp_overlap 185519 GAAATGCATGACATA GCTC AAGAA GAGC TTTTTATAGTAAAAA TERM 267 186100 - 186085 - g 86 -6.2 -5.16133 | opp_overlap 186085 186083 ATCACAACATAAAAA TAAAGC TAAA GCTTTA TCTATTTTATCTGCT TERM 268 186178 - 186152 - g 77 -5.2 -4.92239 | opp_overlap 186157 186159, overlap 186157 186159 GCAAAAAGTCAAAAA GAAAATTCGTCT ATG AGACGTATTTTA TTAGGAACTGGTGAA TERM 269 186173 - 186157 - g 85 -5.1 -5.29885 | opp_overlap 186157 186159, overlap 186152 186159 AAGTCAAAAAGAAAA TTCGTCT ATG AGACGTA TTTTATTAGGAACTG TERM 270 186157 - 186173 + G 70 -5.1 -4.63932 | opp_overlap 186157 186152 186159, overlap 186159 AAGTCAAAAAGAAAA TTCGTCT ATG AGACGTA TTTTATTAGGAACTG TERM 271 186159 - 186171 + G 74 -7.7 -3.93367 | opp_overlap 186159 186157 186152, overlap 186157 GTCAAAAAGAAAATT CGTCT ATG AGACG TATTTTATTAGGAAC prfA 185288 - 186373 + | peptide chain release factor 1 TERM 272 186574 - 186557 - g 70 -8.5 -2.59793 | overlap 186556 186554 TTATTTATAGAAGAT CTATAGG TGAA CCTATAG CCTATATAATAGGAA TERM 273 186875 - 186894 + G 80 -8 -4.02742 | TTTATAGTAACTGGT TTTCTCAT ATAA ATGAGAAA TTTCATATTATTGTC hemK 186370 - 187197 + | hypothetical protein TERM 274 187205 - 187195 - f 78 -4 -5.75342 | TTTGGTCAAAAAAAA TGAT AAA ATCA TTAAAATACCATATT ychA 187362 - 188171 + | putative transcriptional regulator nadE 188996 - 188190 - | NAD synthetase TERM 275 189331 - 189345 + G 73 -2.2 -5.75342 | overlap 189332 AAAGATGCTTTAAAC TTTATT TTT AATAAG TTTTTTTTGGAAAAA TERM 276 189438 - 189422 - g 72 -4.5 -4.9448 | ATGGAGGAAATAAAA TAAAATC GTC GACTTTA ATAGATGATAACATT ackA 189118 - 190329 + | acetate kinase TERM 277 190432 - 190422 - g 79 -4 -5.63517 | CCTTTAAACAAAAAA GTTA GTT TAAC AACAATAAGTTTAAG TERM 278 190620 - 190638 + G 72 -9 -2.72227 | opp_overlap 190619 190617 AATTCTGATGAATAT TCTTATCT TTT AGATAAGA TAATTAAGGAATGTT TERM 279 190982 - 190967 - g 95 -4 -6.38655 | opp_overlap 190981, overlap 190969 AAATACAAAAAAAAA TACATG TATT CATGCA ATTAAAAAAAATATT TERM 280 190981 - 191008 + G 91 -5.8 -5.6473 | opp_overlap 190967 190984, overlap 190984 ATACATGTATTCATG CAATTAAAAAAA ATAT TTTTTTTAATAG TTTTTTTCGTGTTAT pta 190383 - 192512 + | phosphate acetyltransferase nrdB 193912 - 192782 - | ribonucleotide-diphosphate reductase subunit beta nrdA 196254 - 193963 - | ribonucleotide-diphosphate reductase subunit alpha TERM 281 194346 - 194336 - G 76 -6.8 -4.45083 | opp_overlap 194318 194336 TTTATACTGATAAAA CCTC TTG GAGG TTCAATACCATTAGT gyrA 198832 - 196355 - | DNA gyrase subunit A TERM 282 196891 - 196914 + g 100 -6.2 -5.52909 | opp_overlap 196901, overlap 196906 TGCCTGCAATTCTAG GTTTTTTAAA TTCT TTTAAAGAAC TTTTTTTAACTATTC TERM 283 199403 - 199393 - g 85 -5.4 -5.41746 | AACTTTTTAAAAAAA GATC CAG GATC AAAAACTATATCCTA yba2 199111 - 199815 + | hypothetical protein TERM 284 199872 - 199850 - T 74 -8 -3.64283 | overlap 199869 CAAAGTTGTTAATAA TTTATTTTTA AAT TAAAAATAAA GCCAGCATATTTTTT TERM 285 199900 - 199869 - T 79 -6.7 -4.98531 | overlap 199850 199873 TTTTTAAATTAAAAA TAAAGCCAGCATA TTTTTT TTTGCTGACTTTA AAATTATCTGTTAAT ahpC 200514 - 199918 - | alkyl hydroperoxide reductase subunit C TERM 286 201325 - 201301 - R 95 -10.3 -4.74706 | opp_overlap 201301 201324, overlap 201310 TTTAAGATTTAAAAA TAGAAAAAATT TTA AATTTTTTCTA TTTTTAAAAAATTTT TERM 287 201301 - 201325 + r 91 -10.3 -4.61527 | opp_overlap 201301 201310, overlap 201324 TTTAAGATTTAAAAA TAGAAAAAATT TTA AATTTTTTCTA TTTTTAAAAAATTTT TERM 288 201344 - 201310 - R 71 -2.4 -5.69068 | opp_overlap 201301 201324 201326 201340, overlap 201301 TAAAAATAGAAAAAA TTTTAAATTTTTTCTA TTT TTAAAAAATTTTAAAA ATGTTTTTTATTAAT TERM 289 201324 - 201347 + r 80 -4.8 -5.5353 | opp_overlap 201301 201310, overlap 201301 201326 201340 ATTTTAAATTTTTTC TATTTTTAAA AAAT TTTAAAAATG TTTTTTATTAATATC grpE 201942 - 201376 - | hypothetical protein TERM 290 201516 - 201526 + g 83 -4 -5.87688 | CATGAATTTTTGGAT TGAA TAT TTCA TTTTTTTTGCCTTCT TERM 291 202011 - 202021 + H 78 -2.6 -6.09888 | overlap 202007 TCAAGGTAATTTTTT TATT AAA AATA TTTTTTTTATTGGGA yfjB 202048 - 202926 + | hypothetical protein TERM 292 202938 - 202948 + F 72 -2.6 -5.71983 | opp_overlap 202938, overlap 202944 TTAGATTATTAAAGA TTTT TAT AAAA TTTTTTTATAGTTAA smpA 203016 - 203330 + | small protein A ydhD 203859 - 204182 + | hypothetical protein TERM 293 204201 - 204248 + T 75 -3.9 -5.60993 | gap 2 ATTTAAACAAAATAA GATATGACATTATGTAAAAATCA GAAT TG-TTATTAT-TAATGTCATATC TTTTTTTATAAAAAG rnt 204950 - 204291 - | ribonuclease T TERM 294 205210 - 205254 + H 83 -6.1 -5.64328 | opp_overlap 205215 205217, overlap 205217 TGTACTATAATTTAA TAAAATATTTAAGATTAAATT ACT AATTTCATCTTAAATTTATTA TTTTATTTTTTTATT TERM 295 205249 - 205215 - H 74 -6 -4.73635 | opp_overlap 205210 205217, overlap 205217 TATAATTTAATAAAA TATTTAAGATTAAATT ACT AATTTCATCTTAAATT TATTATTTTATTTTT TERM 296 205217 - 205247 + H 89 -8.6 -4.78266 | opp_overlap 205215 205217, overlap 205210 TAATTTAATAAAATA TTTAAGATTAAATT ACT AATTTCATCTTAAA TTTATTATTTTATTT TERM 297 205247 - 205217 - H 80 -8.6 -3.9716 | opp_overlap 205217 205210, overlap 205215 TAATTTAATAAAATA TTTAAGATTAAATT ACT AATTTCATCTTAAA TTTATTATTTTATTT sodA 205283 - 205894 + | superoxide dismutase [Mn] TERM 298 205988 - 205966 - f 100 -9.4 -5.45802 | opp_overlap 205950 205966, overlap 205950 GTTTTAAAATAAAAA CATATAATAT TTA ATATTATATG TTTTTCATTTTTTAT TERM 299 205966 - 205988 + F 95 -9.4 -5.27769 | opp_overlap 205950 205966, overlap 205950 GTTTTAAAATAAAAA CATATAATAT TTA ATATTATATG TTTTTCATTTTTTAT pth 206033 - 206581 + | peptidyl-tRNA hydrolase TERM 300 206676 - 206704 + G 70 -5.3 -4.60648 | opp_overlap 206677 206679 206682, overlap 206677 TTTAAATGTGGAATT ATAGGATTACCCA ATG TGGGTAAATCTAC TTTATTTAATGTTTT TERM 301 206677 - 206703 + G 77 -8.8 -3.33949 | opp_overlap 206677 206679 206682, overlap 206676 TTAAATGTGGAATTA TAGGATTACCCA ATG TGGGTAAATCTA CTTTATTTAATGTTT TERM 302 206698 - 206682 - g 75 -9.5 -2.69964 | opp_overlap 206677 206676, overlap 206679 206677 TGTGGAATTATAGGA TTACCCA ATG TGGGTAA ATCTACTTTATTTAA TERM 303 207192 - 207177 - g 75 -3.4 -5.48825 | opp_overlap 207168 GATCATTTAAAAAAA TTTTTA ATGT TAAAAA CACTTGAGTTAGATG TERM 304 207346 - 207336 - g 77 -5.4 -5.08011 | AAAATGGCTAAAAAA GAAG GTT CTTC AGTCATTCCAATTAA ychF 206655 - 207743 + | translation-associated GTPase TERM 305 207760 - 207791 + T 95 -11.2 -4.18167 | gap 1, opp_overlap 207765 207767 AAAAGTTATTTTTTA TTAGAGAGGA-AAAT TTA ATTTATCCTCTCTAA TTTATATGATTATTT thrC 209090 - 207801 - | threonine synthase thrB 210023 - 209094 - | homoserine kinase thrA 212487 - 210043 - | bifunctional aspartokinase I/homeserine dehydrogenase I TERM 306 210485 - 210504 + g 90 -5.1 -5.73672 | opp_overlap 210485 AAATCATCGAAGGGA TTAGGTT CAGTAA AACCTAA TTTTTTTGCTTCTTT TERM 307 210679 - 210691 + g 70 -3.5 -5.13722 | AACATTAGTTTCATA TAAAA ATT TTTTA TTTTCTTTTAATGCA TERM 308 211139 - 211150 + g 80 -4.4 -5.47846 | TGAATATTTTGTATA CCTT GTAA AAGG TTTTCTTTTTTAATT hpt 213256 - 213789 + | hypoxanthine phosphoribosyltransferase panC 214655 - 213798 - | pantoate--beta-alanine ligase panB 215462 - 214671 - | 3-methyl-2-oxobutanoate hydroxymethyltransferase dksA 216016 - 215561 - | DnaK suppressor protein TERM 309 216221 - 216187 - H 74 -6 -4.78149 | opp_overlap 216181 216192, overlap 216188 216217 TTTATAATTGAAAAA TTTATTTTTTTCTTTT TAT AAAAGAAAAAATTAAT ATAAATAATATTAAC TERM 310 216220 - 216188 - H 78 -9.5 -3.46167 | opp_overlap 216181 216192, overlap 216187 216217 TTATAATTGAAAAAT TTATTTTTTTCTTTT TAT AAAAGAAAAAATTAA TATAAATAATATTAA TERM 311 216192 - 216216 + H 82 -10.3 -3.28416 | opp_overlap 216188 216187, overlap 216181 AATTGAAAAATTTAT TTTTTTCTTTT TAT AAAAGAAAAAA TTAATATAAATAATA TERM 312 216235 - 216217 - H 75 -3.3 -5.86976 | overlap 216188 216187 TTATAAAAGAAAAAA TTAATAT AAATA ATATTAA CATAAACTTTAGTTA truA 216323 - 217114 + | tRNA pseudouridine synthase A TERM 313 219522 - 219534 + F 75 -3.5 -5.86609 | opp_overlap 219509, overlap 219509 AATAAAAATAGTATT TTTAT TGA ATAAA TTTTTATTTTTTTGA TERM 314 220484 - 220465 - g 85 -5.1 -5.33921 | AAATTAATGAAAAAA GAAGAAT CTTTAT ATTCTTC AAATAATATTATATT TERM 315 221553 - 221567 + G 70 -8.6 -2.6193 | ACAACGTCGTGTAAT TTACGC ACA GCGTAA TAAATTAATTGATTC TERM 316 221997 - 222024 + G 83 -9.4 -3.66844 | opp_overlap 222005 ATATAAACGTGAATC TTTTAACATGTT TTCT AACATGTTAGAA TTATTAAAATATGAA secA 219583 - 222207 + | preprotein translocase subunit SecA mutT 222237 - 222629 + | mutator MutT yacE 223287 - 222655 - | hypothetical protein TERM 317 223377 - 223391 + H 72 -4.4 -5.40625 | opp_overlap 223366, overlap 223366 223385 AGAATTTTAATATAT TTTTAT ATT ATAAAA TTTTTTATATCATAT TERM 318 223752 - 223762 + G 73 -4 -5.44119 | GTGTCAATTGGAACG TCTA ATC TAGA TTTTTTTAAAATAAA guaC 223437 - 224486 + | guanosine 5'-monophosphate oxidoreductase TERM 319 224565 - 224508 - f 82 -10.5 -3.33744 | opp_overlap 224518 224557 224558, overlap 224509 224513 224518 TTTTTTGTTAAAAAG TTAAATAAAATCAATAAAATTAATTAT ACTC ATAGTTAATTTTATTGATTTTTTTTAG AAAAAATAATTTTTT TERM 320 224564 - 224509 - f 95 -14 -2.60032 | opp_overlap 224518 224557 224558, overlap 224508 224513 224518 TTTTTGTTAAAAAGT TAAATAAAATCAATAAAATTAATTAT ACTC ATAGTTAATTTTATTGATTTTTTTTA GAAAAAATAATTTTT TERM 321 224560 - 224513 - f 87 -10.4 -3.99805 | opp_overlap 224518 224557 224558, overlap 224509 224508 224518 TGTTAAAAAGTTAAA TAAAATCAATAAAATTAATTAT ACTC ATAGTTAATTTTATTGATTTTT TTTAGAAAAAATAAT TERM 322 224518 - 224555 + F 100 -12.5 -5.75342 | opp_overlap 224513 224509 224508 224518 AAAAGTTAAATAAAA TCAATAAAATTAATTAT ACTC ATAGTTAATTTTATTGA TTTTTTTTAGAAAAA TERM 323 224555 - 224518 - f 95 -10.3 -4.97824 | opp_overlap 224518, overlap 224513 224509 224508 AAAAGTTAAATAAAA TCAATAAAATTAATTAT ACTC ATAGTTAATTTTATTGA TTTTTTTTAGAAAAA TERM 324 224558 - 224586 + F 84 -5.6 -5.69262 | opp_overlap 224513 224509 224508 224575 224576, overlap 224557 224580 TTAATTTTATTGATT TTTTTTAGAAAA AATAA TTTTTTAAAAAA TTTTTATTTTTGTAG aceE 224713 - 227379 + | pyruvate dehydrogenase subunit E1 TERM 325 228482 - 228469 - g 70 -5.3 -4.6635 | opp_overlap 228477 AAAGCTTTAATAAAA CCATT ATGG AATGG AAAAGAATTTATCCC aceF 227383 - 228618 + | branched-chain alpha-keto acid dehydrogenase subunit E2 TERM 326 228911 - 228879 - g 70 -6.5 -4.15044 | GTTTTTTTTAATAAA CCAATTATTGATATT AAA AAGATTAATAATTGG AAAGAAAAAATTATT TERM 327 229059 - 229031 - g 72 -4.1 -5.00616 | TGTTTTGGTAAAAAA TAAAAAAAATGAT TTT ACGATTTTTTTTA AACATGCAATTATTG lpdA 228645 - 230075 + | dihydrolipoamide dehydrogenase TERM 328 230118 - 230079 - T 100 -14 -3.89354 | opp_overlap 230079 TTGTTAAATTAACAA TTGATACACTTCTTTT CTTGGTGT AAAAGAAGTGTATCAA TTTTTTAACTTTTGA TERM 329 230079 - 230118 + T 100 -14 -5.2696 | opp_overlap 230079 TTGTTAAATTAACAA TTGATACACTTCTTTT CTTGGTGT AAAAGAAGTGTATCAA TTTTTTAACTTTTGA speD 230969 - 230163 - | S-adenosylmethionine decarboxylase TERM 330 230784 - 230774 - G 74 -5.4 -4.73388 | AATCTTGATGAAAAA CGTT AAG AACG TTAGCACCAATAATT speE 231857 - 230997 - | spermidine synthase TERM 331 231073 - 231083 + g 74 -2.6 -5.65678 | opp_overlap 231073 231074, overlap 231074 TTGGAATTATAGTAA TTAA AAG TTAA TTTTTTATCTTTTAT TERM 332 231247 - 231258 + g 72 -3 -5.40072 | AAATTTTTATAGCTT TGAT TAAT ATCA TTTTTTTGAAGAAAA pfs 232787 - 232080 - | 5'-methylthioadenosine nucleosidase yadR 233209 - 232865 - | iron-sulfur cluster insertion protein ErpA TERM 333 233349 - 233386 + r 82 -10.7 -3.34222 | opp_overlap 233348 TATAAAAAATAAGTC CTTGCGCCGATAGATAA TACA TTAATTATTGGCGCAGG TTATGGAATAATAAT ftsZ 234638 - 233484 - | cell division protein FtsZ TERM 334 233641 - 233651 + g 70 -4 -5.16969 | TAATCCATTAGTATT TCTT TAG AAGA TTTATTTTTTGTCTG ftsA 235942 - 234686 - | cell division protein FtsA ddlB 237208 - 236288 - | D-alanine--D-alanine ligase TERM 335 236795 - 236808 + g 74 -2.5 -5.79526 | opp_overlap 236795 TATTACAACGGGAAA TTTTA ATTT TAAAA TTTTTTTTAAAATAT TERM 336 236996 - 236976 - G 72 -7.7 -3.78902 | overlap 236965 236983 TAAGGAATATTTAAA TATTCAAGA ATT CCTTGAATA CTACCATCTTCACCT TERM 337 237628 - 237642 + r 85 -2.2 -6.48081 | overlap 237630 TATTAACATAACACT TTTATT TTG AATAGA TTTTTTTTTTATAAA murG 239771 - 238707 - | UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase TERM 338 238806 - 238821 + g 70 -6.2 -4.16158 | CATTATAAACAGTTT TTCTCT GTTT AGAGAA TTTAATATTTTTATA ftsW 240833 - 239772 - | cell division protein FtsW TERM 339 240897 - 240917 + r 71 -8.5 -2.8541 | opp_overlap 240895 240893 240897, overlap 240896 GTATAATACAATATA GTTTTTTTT TTT AAAAAAAAC ATTAATTTATTTCCT TERM 340 240917 - 240897 - R 73 -8.5 -3.29569 | opp_overlap 240897 240896, overlap 240895 240893 GTATAATACAATATA GTTTTTTTT TTT AAAAAAAAC ATTAATTTATTTCCT murD 242241 - 240919 - | UDP-N-acetylmuramoylalanine--D-glutamate ligase TERM 341 241147 - 241161 + g 70 -2.2 -5.46629 | opp_overlap 241160 ATATATTTTTATTTT TATTTT TTC GAAATA TTTTTTTAAAATATT TERM 342 241458 - 241469 + g 93 -3 -6.23317 | TTAATAAAATGTTAC TAGT ATCA ACTA TTTTTTTGTTTTTAT TERM 343 243409 - 243425 + r 71 -2.3 -5.69262 | TTTAAAATTGTTTCT TTCAAAC TTT GTTTTAA TTTTTCTTTTTCTAA TERM 344 243941 - 243974 + r 100 -7.9 -5.86332 | gap 1, opp_overlap 243951, overlap 243928 TTTCTTTTTTTTTTC GATAGAAAAATAAAAA ACA TTTTTATTTTT-TATC TTTTTTTTCCATTGA TERM 345 245038 - 245048 + r 72 -3.2 -5.53991 | TAATAAGATTTAATT GCGT TTA ATGC TTTTTTTAATGCATC ftsI 247878 - 246172 - | penicillin binding protein 3 precursor TERM 346 246267 - 246251 - G 78 -10.1 -2.65772 | overlap 246250 246249 ATTTTACTAAAAACT GGCGCAG ATA CTGCACC TCCATAATATTTTTC TERM 347 246663 - 246647 - G 80 -8.1 -4.18197 | AGTCCGTATCCAAAA GAAAAAG TCG CTTTTTC TAGATCTGATAATTT TERM 348 247062 - 247079 + g 71 -7.1 -3.95219 | opp_overlap 247059 247058, overlap 247060 GATTATATGAAGGGC TATTAGC CATA GCTAATA TTTCTCCAGTTTCAA ftsL 248195 - 247950 - | cell division protein FtsL yabC 249136 - 248198 - | hypothetical protein TERM 349 249202 - 249167 - R 91 -9.2 -4.84602 | opp_overlap 249170, overlap 249168 249170 ATATAAATAAAGAAA GTACATAGTCATTTTC AAAT GAAAATGACTATGTTT AATGTATTTTTTATA TERM 350 249201 - 249168 - R 95 -12.7 -3.48321 | opp_overlap 249170, overlap 249167 249170 TATAAATAAAGAAAG TACATAGTCATTTTC AAAT GAAAATGACTATGTT TAATGTATTTTTTAT TERM 351 249170 - 249199 + r 100 -15.3 -4.04355 | opp_overlap 249170 249168 249167 TAAATAAAGAAAGTA CATAGTCATTTTC AAAT GAAAATGACTATG TTTAATGTATTTTTT TERM 352 249199 - 249170 - R 100 -15.3 -3.28189 | opp_overlap 249170, overlap 249168 249167 TAAATAAAGAAAGTA CATAGTCATTTTC AAAT GAAAATGACTATG TTTAATGTATTTTTT TERM 353 249267 - 249252 - R 82 -4.8 -5.76237 | opp_overlap 249252 249254, overlap 249245 TATATAAATAAAAAA TCTTTT TTTT AAAAGA ATTTTTTTCAATAGA ilvH 249785 - 249309 - | acetolactate synthase small subunit TERM 354 249431 - 249451 + g 74 -7.7 -3.96624 | TCTGTAATACATATG TTGTAGATG TTA TATCTACAA TTTGTCCTCGAAATA ilvI 251505 - 249790 - | acetolactate synthase large subunit TERM 355 251057 - 251034 - G 71 -6.7 -3.89354 | TTGGTAAATCAATAA CTACTGGAC CAGGTC GTCCGGTAG ATGCTAACCAAAAAG TERM 356 251818 - 251831 + H 74 -5.3 -5.02074 | opp_overlap 251825 AGATTTTCTCTTAAT GCTAA TATT TTAGC TTTTTTAAAACCTAA htrA 252941 - 254377 + | serine endoprotease TERM 357 254391 - 254414 + T 91 -9.5 -4.84033 | AACTACTTTATTGTT CCGCCCGAT ATAATC ACCGGGCGG TTTTCATTTTTCTAT dapD 255247 - 254426 - | 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase TERM 358 255265 - 255281 + r 72 -5.3 -4.77157 | opp_overlap 255265, overlap 255251 255273 TTTAAATTGACCTAA TTTAATA TTT TATTAAA TTTTTAATAGATTAA map 256082 - 255297 - | methionine aminopeptidase TERM 359 255913 - 255923 + g 100 -4.6 -6.17184 | opp_overlap 255913 TGATATCCTAAACAT GCTG AAA CGGC TTTTTTTTTAATAAT TERM 360 256309 - 256321 + H 78 -3.5 -5.94713 | TTGAATTATCTAGTT TTATT TAA AATAA TTTTTTTTATAAAAT rpsB 256370 - 257104 + | 30S ribosomal protein S2 TERM 361 257773 - 257758 - g 75 -3.3 -5.58074 | GAATTAGCAAAAAAA CAGAA TAAATC TTCTG AAATACTAAAAAAGA tsf 257146 - 257949 + | elongation factor Ts pyrH 258047 - 258769 + | uridylate kinase TERM 362 259227 - 259208 - g 78 -7.2 -4.40601 | AATTTATATAAGAAA CATTCGCA GAGA TGCAAATG ATAAGATAAAAAATT frr 258819 - 259376 + | ribosome recycling factor TERM 363 259775 - 259797 + G 85 -8.5 -4.23647 | overlap 259776 259793 TCCGATTTAGTTATA TCTGCCATT GTAGG AATGGCAGG TTTATTACCTACTTT TERM 364 259776 - 259796 + G 78 -9.8 -3.13104 | overlap 259775 259793 CCGATTTAGTTATAT CTGCCATT GTAGG AATGGCAG GTTTATTACCTACTT dxr 259481 - 260677 + | 1-deoxy-D-xylulose 5-phosphate reductoisomerase TERM 365 261050 - 261024 - g 78 -3.2 -5.67283 | overlap 261017 AAGTGAAATAAAAAA TTTAAATAAATA TAA TATTCGTTTAAA AATAATTGGAGATAC uppS 260728 - 261477 + | undecaprenyl pyrophosphate synthetase TERM 366 261635 - 261607 - f 74 -6.3 -4.81212 | opp_overlap 261626 TTTATTATAATAAAA TTTTAAATAAAAA TGA TTTTTTTTTAAAA TAAAAGATATACTGT TERM 367 263972 - 263986 + G 71 -2.8 -5.56673 | TACAATGGTTTTCTC CTATTG GTC CATTAG TTTTTTCTTATGCAT yaeT 261670 - 264069 + | hypothetical protein fabZ 264145 - 264603 + | (3R)-hydroxymyristoyl-[acyl carrier protein] dehydratase dnaE 264635 - 268120 + | DNA polymerase III alpha chain TERM 368 268140 - 268154 + T 80 -2.2 -6.34424 | ATTTGATTTGTTCTT TTAAAT TAA GTTTAA TTTTTTTTTTAAAAA proS 269855 - 268140 - | prolyl-tRNA synthetase TERM 369 268573 - 268588 + g 82 -3.3 -5.85178 | TTATTGTGTTGTTCT TGAAC TAGTAC GTTCA TTTTTTTTGAATATT TERM 370 269036 - 269064 + g 95 -7.7 -5.35222 | opp_overlap 269036 TAGTTTTTATAAAAT TTTTAATGGGTTT TTT AAATTCATTAAAA TTTTTTGTGCATTTT TERM 371 269096 - 269109 + g 86 -3.1 -6.09196 | TACTTTTTATTTGAT TCGGA ATTA TTCGA TTTTTTTCTTTTAAA TERM 372 269927 - 269887 - H 76 -5.1 -5.34365 | opp_overlap 269891 269893 269894 269924 269926, overlap 269891 269922 269924 TTATAAGAATAAAAA TAATTTTTTTTAAAATAAA ATA TTTATTTCAAAAATATTTA AAATGTTTATTTTAA TERM 373 269978 - 269988 + H 72 -2.6 -5.76949 | opp_overlap 269987, overlap 269965 269985 269987 TATATAATAAAATTG TATT TAA AATA TTTTTTTTAAAAATA TERM 374 270257 - 270242 - g 71 -4.8 -4.8622 | opp_overlap 270236 270242 TTTTTGAATTAAAAA CTATTA TGTT TAATAG TTTTAATTTTAATCA flhB 270067 - 271212 + | flagellar biosynthesis protein FlhB flhA 271205 - 273292 + | flagellar biosynthesis protein FlhA argS 275139 - 273397 - | arginyl-tRNA synthetase TERM 375 275262 - 275278 + r 72 -5.3 -4.74787 | CTTAATATTTTTTAT TTATAAT GTT ATTATAA TTTCTTTCTCTTTAT TERM 376 275352 - 275316 - R 85 -9.9 -4.18488 | opp_overlap 275329, overlap 275329 275336 ACTTACTTTAATAAA TTTTTTTATAAAATTAA AAA TTAATTTTATTAAAAAA GGTTGACAACACGAT TERM 377 276150 - 276130 - R 74 -8.3 -3.64371 | opp_overlap 276125 AAGTCAGATGTGAAA TCCCTAGGC TTA ACCTAGGAA CTGCATTTGAAACTG TERM 378 276557 - 276544 - R 71 -2.3 -5.72622 | TTTAGAAATAAAAAA GTGCC TTCG GGAAC TGTGAGACAGGTGCT TERM 379 277033 - 277050 + r 75 -9.1 -3.07291 | opp_overlap 277033 GTCGTAACAAGGTAA CCGTAGG GGAA CCTGCGG TTGGATCACCTCCTT gloB 278047 - 277295 - | hydroxyacylglutathione hydrolase TERM 380 277415 - 277442 + g 71 -8.6 -2.91696 | overlap 277414 AAAAATATTTATTTT TTTTTCAGTTTC AAGA GAAACTGGAAGA CTTGTCTTATTCTGA rnhA 278556 - 278071 - | ribonuclease H dnaQ 278600 - 279304 + | DNA polymerase III epsilon chain TERM 381 279439 - 279423 - f 70 -7.9 -3.21593 | CAGTCGGTTAGAATA CCGGCCT GTC ACGCCGG GGGTCGCGGGTTCGA gmhA 279530 - 280114 + | phosphoheptose isomerase gpt 280218 - 280682 + | xanthine-guanine phosphoribosyltransferase grpE1 280779 - 281387 + | hypothetical protein yfjF 281679 - 281392 - | hypothetical protein TERM 382 282270 - 282258 - g 79 -3.5 -5.75538 | TGGAAAAAAGAAAAA TTAAA AAT TTTAA AGAAAGTTAAATTTC smpB 281802 - 282293 + | SsrA-binding protein yfhC 282303 - 282758 + | hypothetical protein TERM 383 282803 - 282781 - T 72 -5.8 -4.56597 | CCTTTTTCTTAAAAA TAATTATTTT TCT AAAATAACTA ATGCACATGCGTACA acpS 283164 - 282784 - | holo-[acyl-carrier protein] synthase TERM 384 283207 - 283260 + r 100 -9.5 -5.46698 | opp_overlap 283219, overlap 283209 283210 283251 GTAAAATGTTTAGTT TGATTTTTAAAATTAGTTAAAAT TTTTAAGT ATTTTAACTAATTTTAAAAACTA TTTTTTAATTTTCAC TERM 385 283209 - 283258 + r 87 -9.9 -4.35313 | opp_overlap 283219, overlap 283207 283210 283251 AAAATGTTTAGTTTG ATTTTTAAAATTAGTTAAAAT TTTTAAGT ATTTTAACTAATTTTAAAAAC TATTTTTTAATTTTC TERM 386 283210 - 283257 + r 93 -13.4 -3.18747 | opp_overlap 283219, overlap 283209 283207 283251 AAATGTTTAGTTTGA TTTTTAAAATTAGTTAAAAT TTTTAAGT ATTTTAACTAATTTTAAAAA CTATTTTTTAATTTT era 284094 - 283258 - | GTP-binding protein Era rnc 284771 - 284091 - | ribonuclease III lepB 285847 - 284909 - | signal peptidase I lepA 287669 - 285864 - | GTP-binding protein LepA TERM 387 286908 - 286924 + g 72 -3.1 -5.42259 | TACTTCGCCGCATTT TAAATAG TTT TTATTTA TTTTTTTAGGCGTGA TERM 388 287888 - 287875 - H 71 -2.5 -5.78622 | opp_overlap 287875 TTATTTCAAAAAAAA TATTA AATT TAATA TCTTTTAAAACAATG trmU 287920 - 289023 + | tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase purB 289173 - 290543 + | adenylosuccinate lyase TERM 389 291450 - 291426 - g 72 -4.5 -5.04908 | overlap 291443 AAAACAAAAAAATAA TTAATAAAATA AAA TATTTAATTAA ATCAATTAATTACAA fabI 291293 - 292075 + | enoyl-[acyl-carrier-protein] reductase TERM 390 292710 - 292662 - g 77 -7.7 -4.25104 | TGGGCTGTAGCAAAA TTAATTCAACACAAACTTAATGG AAA CCATATATTTTATGCTGAATTAA TTGAAGAAATAGTTA TERM 391 292841 - 292829 - g 76 -6.3 -4.63089 | opp_overlap 292828 TATTTTAAAAAATAA TTCTC ATA GAGAA GATTTAACACATCTT TERM 392 293260 - 293242 - g 86 -3.8 -6.11644 | GGATTGAAAAAAAAA GTTCATGG AAA CCAGAAAC AAAATCAATTGAAAA rnb 292269 - 294209 + | exoribonuclease II TERM 393 294414 - 294424 + G 70 -4 -5.10601 | opp_overlap 294414 CGAAAAAAAACTAAT TTAG TTG CTAA TTTTTCTGCTTTTAT TERM 394 294522 - 294544 + G 82 -6.4 -5.04175 | opp_overlap 294526, overlap 294511 TTTCGTATTGCAGGA GGAATACTAA TTA TTAGTATTGC TTTTTCTATGATTAG ychE 294273 - 294908 + | hypothetical protein lipB 294987 - 295643 + | lipoate-protein ligase B TERM 395 295689 - 295667 - f 80 -5 -5.61596 | opp_overlap 295648, overlap 295648 ATTTTTAGAAAAAAA TTTTATTCTT ATT AAGAATATAA CATTGTATCAAATAA TERM 396 295826 - 295810 - g 95 -3.8 -6.44931 | opp_overlap 295810, overlap 295815 AACAATAAAAAAAAA TAACAT AATAA ATGTTA TTACTACTGAAAGTT lipA 295766 - 296725 + | lipoyl synthase TERM 397 296712 - 296725 + F 80 -2.5 -6.34616 | opp_overlap 296712, overlap 296712 AAGCAAATAAATTGA TTAAA AAAA TTTAA TTTTTTTTATTTTAA pyrF 296820 - 297530 + | orotidine 5'-phosphate decarboxylase TERM 398 298103 - 298088 - g 81 -2.6 -6.15717 | opp_overlap 298093 TAAATATAAAAAAAA TTCGTT TATT AACAAA TAATCCATTTAAAGT ribA 297655 - 298245 + | GTP cyclohydrolase II cls 299892 - 298432 - | cardiolipin synthetase TERM 399 299094 - 299075 - G 73 -8.6 -3.11832 | overlap 299073 CATGAATAAATTATA CCTATAGC TGTA GCTACAGG ACCTTCTATTCTTGT TERM 400 299177 - 299155 - G 79 -7.8 -3.91716 | opp_overlap 299158 GGATTGTTTAAATAA GTATGGATCT ACA AGATTCATAC TTCCAGAATAAGAAA yciA 300659 - 300252 - | hypothetical protein TERM 401 300387 - 300346 - G 73 -8.9 -2.87028 | opp_overlap 300346 300347 300354, overlap 300342 GCACAATAAAATTGA CCTAGAGGTTTAGAATAAA TTTT TTTAATCCATACCTCTAGA TTGATAGTAATAGAA TERM 402 300354 - 300364 + g 71 -2.6 -5.53991 | opp_overlap 300346 300342, overlap 300347 300346 AAATTGACCTAGAGG TTTA GAA TAAA TTTTTTTAATCCATA ispZ 301234 - 300701 - | intracellular septation protein yciC 302006 - 301263 - | hypothetical protein TERM 403 301760 - 301746 - G 77 -5.8 -4.7497 | opp_overlap 301746 301744 301746 301755 301756, overlap 301752 TTTACTTATCAAAAA TTCAAA TAT TTTGAA TATTGAATATTTAAG trpA 302933 - 302118 - | tryptophan synthase subunit alpha TERM 404 302358 - 302368 + g 93 -4 -6.30182 | TATAAATATATTTGA CAAT GAT ATTG TTTTTTTTTCTATCC trpB 304119 - 302920 - | tryptophan synthase subunit beta TERM 405 304012 - 304030 + g 78 -3.2 -5.71983 | TTGAAAATTTGAATC TTTTTTTG CGT CAACAAAA TTTTTTTCTAATTGA trpC 305512 - 304157 - | bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase trpD 306521 - 305514 - | anthranilate phosphoribosyltransferase TERM 406 305921 - 305933 + g 77 -4.9 -5.24129 | AAATTCTAGACATAG GATTT ACT AAATC TTTTTTATAAACACC TERM 407 306738 - 306759 + G 86 -3.1 -6.02546 | GAATTTTAATATGCA CAAAATTAT AATC ATAATGTTG TTTTTTTTAGTTTCA TERM 408 307539 - 307529 - g 79 -4 -5.65177 | opp_overlap 307533 ATATTTATAAAAAAA CAAT CTT ATTG TATGAGTTATGGTTT Y281 306733 - 307635 + | hypothetical protein yciL 307632 - 308405 + | hypothetical protein sohB 308452 - 309480 + | putative periplasmic protease TERM 409 309792 - 309776 - g 95 -3.1 -6.4275 | TAAAAACAAAAAAAA TATTAAA AAA TCTAATA TCAAACATAATGAAA TERM 410 310073 - 310057 - g 71 -6.7 -3.98857 | TAACTAAAAAATCAA TTGAAAA AGC TTTTCAA AATATTGGTAAAATT TERM 411 310409 - 310399 - g 71 -2.6 -5.5208 | opp_overlap 310399 CTACAATAGAAAAAA TAAA AAA TTTA TCTTTTATTATTACA TERM 412 310576 - 310591 + G 77 -4.8 -5.12617 | opp_overlap 310563 310574, overlap 310589 GATATATAACTTATA TAAGAA CTGA TTCTTA TTTTTTAAGTAATTA TERM 413 311359 - 311346 - g 82 -4.5 -5.71638 | GAACAAGCAAAAAAA CCTCC TGAA GAAGG TGGTATGGAACTTAA TERM 414 311565 - 311553 - g 74 -4.9 -4.98468 | opp_overlap 311553 ACAACAAAAAAAGAA GAAAA AAA TTTTC ATTTAAAAAATAGAT TERM 415 311621 - 311640 + G 70 -6.6 -4.07124 | opp_overlap 311621 CGTGTATTTAATTAA TGAAAATT TAAA AATTTTCA TTTGTATAAATAATC topA 309636 - 312197 + | DNA topoisomerase I suhB 313017 - 312208 - | extragenic suppressor protein SuhB yfgB 313181 - 314272 + | hypothetical protein TERM 416 314928 - 314940 + G 70 -6.3 -4.09685 | opp_overlap 314917 314928 TAAAGTTAGTGTAAA GACAT CTG ATGTC TTTTCAGCAATAGAA gcpE 314386 - 315489 + | hypothetical protein TERM 417 315850 - 315840 - g 79 -4 -5.78622 | opp_overlap 315840 TTATTTCAAAAAAAA CAAA GAT TTTG GTATTTAGGTCCTAT hisS 315534 - 316820 + | histidyl-tRNA synthetase glyA 316892 - 318145 + | serine hydroxymethyltransferase TERM 418 318224 - 318204 - T 73 -7.1 -4.06611 | opp_overlap 318204 318203 318198, overlap 318208 TAATTATAATAATAA TAAATTTTT GAA AAAAATTTA CTTTTATATTTTATT bioB 320195 - 319167 - | biotin synthase TERM 419 320039 - 320053 + g 71 -5.7 -4.46615 | AATACTTGCAATCTT CTGGA CACGC TCCAG TTTTAATTGATAGTA bioA 320276 - 321574 + | adenosylmethionine-8-amino-7-oxononanoate aminotransferase ybhE 322601 - 321600 - | 6-phosphogluconolactonase TERM 420 321810 - 321800 - G 74 -2.6 -5.75945 | opp_overlap 321800 ATTGTTTAAAAAAAA TAAT TGT ATTA TCATTTTTATTAACA TERM 421 322936 - 322960 + H 85 -8.1 -5.0133 | opp_overlap 322936 CTCTTCTGTTAACAA TCTAATTTTAG AAA TTAAAATTAGA TTTTTTGCAGGAATA TERM 422 325427 - 325387 - H 77 -8.1 -4.06904 | opp_overlap 325416 325418, overlap 325418 TTATTTAATTAGAAA TTTTATAAAATACTTAA AAATAGA TTAAATATTTTATAAAA AAATATTTTTTTCTT TERM 423 325416 - 325432 + H 71 -2.4 -5.7946 | opp_overlap 325387 325418 325431, overlap 325418 TAAAAATAGATTAAA TATTTT ATAAA AAAATA TTTTTTTCTTAAAAA TERM 424 325450 - 325431 - H 81 -5.2 -5.626 | opp_overlap 325416, overlap 325418 325449 TATTTTATAAAAAAA TATTTTTT TCTT AAAAAATA TAAATAATAATCTAT TERM 425 325875 - 325857 - g 86 -9 -4.19974 | AAAACGTTGAAGAAA TTACTGAT TTT ATCAGTAA AAAGGTCATTATTGA TERM 426 326109 - 326099 - g 87 -2.6 -6.17184 | opp_overlap 326099 ATTAGTAAAAAAAAA TTTT TAC AAAA TGATCTCAATATAAA TERM 427 326589 - 326601 + G 80 -4.9 -5.32608 | opp_overlap 326589 TTAGCATTATATTAA TCTTT CAA AAAGA TTTTTTAAATTTTTT ycfU 325580 - 326779 + | hypothetical protein ycfV 326772 - 327461 + | ABC transporter ATP-binding protein TERM 428 327912 - 327878 - g 100 -6.8 -5.75342 | TCTTTTCAAAAAAAA TTATATAATTTTTCTA AAT TAAAAAAAATATATAA TAATGAAATCATTAT TERM 429 328020 - 328002 - g 100 -5.4 -5.95539 | TTTTAAATAAAAAAA TAAGTTTT GAT AAAACTCA AATTCAAAGTTTTTC TERM 430 328134 - 328118 - g 70 -5.3 -4.57837 | opp_overlap 328118 ATATTTTTTCAAAAA TTTTTTA ATA TAAAAAA TAATATTAATAAAAT ycfW 327482 - 328723 + | hypothetical protein TERM 431 328986 - 328970 - g 74 -5.3 -4.75174 | opp_overlap 328973 TATTGAAGTCAAAAA TAATAAT CTT ATTATTA ATGGGAAAAAAATTA gapA 328785 - 329783 + | glyceraldehyde 3-phosphate dehydrogenase TERM 432 329873 - 329900 + T 100 -7.9 -6.02919 | opp_overlap 329872 AATTTTTTTAAAATT GCAGTATTAAG TATAAT TTTAATACTGC TTTTTTTATTTCTAC queF 330707 - 329919 - | 7-cyano-7-deazaguanine reductase fldA 331316 - 330852 - | flavodoxin FldA ybgI 333044 - 333787 + | hypothetical protein TERM 433 335476 - 335462 - g 75 -4.4 -5.11112 | overlap 335463 AAATGGGAATAAAAA TTTTTT TAT AAAAAA ACAAAAAGAAAATAC kgd 333885 - 336656 + | alpha-ketoglutarate decarboxylase TERM 434 337143 - 337124 - g 72 -8 -3.35901 | AAATTAAATGATCAA TCTTTTTC TAAT GAAAAAGA AAAAAAAATTTATGA TERM 435 337188 - 337173 - g 100 -9 -5.35365 | AAAATAGAATAAAAA TGACGC GATT GCGTCA AAAAATTGCTGAAAG TERM 436 337320 - 337330 + G 73 -6.8 -4.13225 | AAAAAAAACACGGTG TCCG AAT CGGA TTTATGCCTTTTTTT sucB 336668 - 337849 + | 2-oxoglutarate dehydrogenase E2 component TERM 437 337847 - 337876 + F 73 -4.5 -5.25893 | opp_overlap 337847 337852 ATTATAATTAATGTA TAAATGTGTTTTT ATGA AAAAAAACGTTTA TTTTTTAGTGTATCT TERM 438 338176 - 338162 - g 79 -5.8 -5.00616 | opp_overlap 338153 TCTCTCTTGAAAAAA GAAAAA TTT TTTTTC GATTATGCACATACT gpmA 338021 - 338713 + | phosphoglycerate mutase TERM 439 338798 - 338769 - f 73 -2.4 -5.96219 | opp_overlap 338760 338758 338777, overlap 338779 338789 TATGTATAAAAAAAA TTTTTTAATATT TTTAAT AATTTTAAAAAA AATTACATACAAAAA TERM 440 339721 - 339707 - g 70 -7.2 -3.58365 | TAGTATATGATAGAA TTCTTG CTT CAAGAA TGGGAGCATATGCAG pfkA 338920 - 339882 + | 6-phosphofructokinase TERM 441 340347 - 340333 - g 70 -7.2 -3.49634 | overlap 340331 AGTCTAAATACAATA TTGTTC GAG GAACAA AAAAAAGTCTTGAAT TERM 442 340655 - 340665 + G 70 -4 -5.10004 | AGCATTTACAGGCGA TGAT AAT ATCA TTTTTCCTTATTTTT glpF 339966 - 340754 + | glycerol uptake facilitator protein TERM 443 340771 - 340752 - T 91 -6.6 -5.71712 | opp_overlap 340752 CTTTATATAAAAAAA TAGTTTTT TATA AAAAACTA TCTGATATTTTTATA tpiA 341523 - 340759 - | triosephosphate isomerase TERM 444 341036 - 341049 + g 74 -5.3 -4.82901 | overlap 341026 TCATATGCAATAACT GCATT TCTA AATGC TTTTTCTCCGAAAGA himD 341898 - 341617 - | integration host factor beta subunit rpsA 343617 - 341938 - | 30S ribosomal protein S1 TERM 445 343649 - 343677 + r 84 -8.4 -4.42325 | opp_overlap 343648 343649, overlap 343646 343668 AAATTTTTATCAAAT GTTTATTTTAAC TTCGT GTTAAAATAAGC TTGTTTTATATATCT TERM 446 343724 - 343740 + r 88 -6.7 -5.56568 | AAAGAGTGCAATTTT TCTAAAT AAA ATTTAGA TTTTTTTGGTAATAT TERM 447 344071 - 344090 + r 72 -4.4 -5.37593 | opp_overlap 344066 344071, overlap 344082 AATAATGAAGTAAAA TTTTTCTG ATTT TAGAAAAA TTTTTTAATTTAACA aroA 345725 - 344439 - | 3-phosphoshikimate 1-carboxyvinyltransferase serC 346875 - 345790 - | phosphoserine aminotransferase serS 348193 - 346910 - | seryl-tRNA synthetase TERM 448 348050 - 348076 + g 80 -4.6 -5.32608 | AGTATTGTGCTTGTA TTGCAAATTG TCTGTTT TAATTTGCAA TTTTTTCCGTTTTTT trxB 348469 - 349428 + | thioredoxin reductase TERM 449 349481 - 349457 - f 95 -10.9 -5.25906 | opp_overlap 349464, overlap 349459 ATAAATTAATAAAAA CATACTAGTCA AAA TGACTAGTATA AGATATAATAAAAAA TERM 450 349479 - 349459 - f 95 -11.3 -4.23353 | opp_overlap 349464, overlap 349457 AAATTAATAAAAACA TACTAGTCA AAA TGACTAGTA TAAGATATAATAAAA infA 349547 - 349765 + | translation initiation factor IF-1 TERM 451 350076 - 350094 + G 70 -8.2 -3.23855 | opp_overlap 350076, overlap 350075 TATTGACATGAGAGA TTGGACAG GTA TTGTCCAA CTTGTTTTTGAAAAA TERM 452 350990 - 350980 - g 76 -4 -5.49729 | AATTATGTAAAAAAA TTTG GTG CAAA AAAACTATTTTATAT TERM 453 351036 - 351020 - g 73 -3.8 -5.3167 | TAAAAATAAATAAAA TTGAAA ATAGA TTTCAA GATATTCAAAGTTCA TERM 454 351076 - 351060 - g 70 -2.4 -5.4756 | opp_overlap 351060 AAGTTCAATAAAAAA TATTTT AGATA AAAATA CTTTAGAAAACATTT TERM 455 351480 - 351458 - g 72 -9.3 -2.74371 | overlap 351475 AAGTTTTTAACATTA TTGGAATTG AAAAA CAATTCCAA AGGGAAAAATTTGGT aspS 349957 - 351711 + | aspartyl-tRNA synthetase znuB 352503 - 351718 - | high-affinity zinc uptake system membrane protein TERM 456 352446 - 352433 - G 72 -4.5 -5.00196 | overlap 352437 CGCCAAATAATAAAA GAACC TAGA GGTCC AGTTGCAAAAGATAA znuC 353241 - 352525 - | high-affinity zinc uptake system ATP-binding protein TERM 457 353351 - 353337 - g 91 -5.8 -5.75538 | opp_overlap 353337 GTTAAAAAATAAAAA GAAAAA ATT TTTTTC TATATTAGCAATACT znuA 353305 - 354258 + | high-affinity zinc uptake system protein ZnuA yebA 354269 - 355516 + | hypothetical protein pykA 356981 - 355536 - | pyruvate kinase TERM 458 356916 - 356900 - G 76 -6.7 -4.52589 | opp_overlap 356900 TTGCTCCAGATAAAA TAATCTT TTC AAGATTA TTTGCTTTATCTGTA TERM 459 356900 - 356916 + g 74 -6.7 -4.19648 | opp_overlap 356900 TTGCTCCAGATAAAA TAATCTT TTC AAGATTA TTTGCTTTATCTGTA zwf 357259 - 358731 + | glucose-6-phosphate 1-dehydrogenase TERM 460 359397 - 359409 + G 76 -6.3 -4.59207 | TGACTTTAGTTCAAG GTGTT GTA AACAC TTTTGTAATCTTTAT TERM 461 359485 - 359509 + G 86 -3 -6.0458 | TAGAAATGAAAATAG TGAAGATGAA AAAGA TTCATTTTTA TTTTTTTTAATTTCT htpX 358928 - 359806 + | heat shock protein HtpX TERM 462 359834 - 359874 + F 73 -9.3 -2.57463 | opp_overlap 359834 359832 359837, overlap 359833 AGAAATATAAAAACA TTATCTCTCTTAGTAGAAA ACT TTTCTATTAAGAGATAAAA CTTATAAAAACACTT TERM 463 359874 - 359834 - f 74 -7.1 -4.23487 | opp_overlap 359833 359834, overlap 359832 359837 AGAAATATAAAAACA TTATCTCTCTTAGTAGAAA ACT TTTCTATTAAGAGATAAAA CTTATAAAAACACTT TERM 464 359871 - 359837 - f 72 -8.8 -3.08388 | opp_overlap 359834 359833, overlap 359834 359832 AATATAAAAACATTA TCTCTCTTAGTAGAAA ACT TTTCTATTAAGAGATA AAACTTATAAAAACA TERM 465 360558 - 360569 + F 71 -2.2 -5.75945 | AGATATATTAAATAT TGGG CTGT CCTA TTTTTTTTACGGAGT TERM 466 360815 - 360827 + G 93 -3.5 -6.28967 | CACTCACTTCTCCTA TTATT AGT AATAA TTTTTTTTCTTTGTC yoaE 360592 - 362139 + | hypothetical protein yeaZ 362213 - 362845 + | hypothetical protein TERM 467 362936 - 362902 - T 100 -10.3 -5.79588 | opp_overlap 362902 TCAAAATTAAAAAAA TCAATACTGAAGTAT TAAAT ATAGTTCAGTATTGA TTATATCGAATTATT TERM 468 362902 - 362936 + T 83 -10.3 -3.53307 | opp_overlap 362902 TCAAAATTAAAAAAA TCAATACTGAAGTAT TAAAT ATAGTTCAGTATTGA TTATATCGAATTATT minE 363278 - 363027 - | cell division topological specificity factor MinE minD 364093 - 363281 - | septum site-determining protein MinD TERM 469 363845 - 363855 + g 83 -4 -5.88197 | opp_overlap 363845, overlap 363834 TGCTGGTAAAATAAA CAAA TTT TTTG TTTTTTTATCTTTAA minC 364846 - 364118 - | cell division inhibitor MinC TERM 470 364569 - 364558 - G 73 -5.8 -4.63932 | TACTTTCTAACAAAA CAGG TAAG CCTG ATTCAACAATAATTT yjjT 365092 - 366102 + | hypothetical protein TERM 471 366425 - 366439 + T 83 -5.8 -5.63517 | TTAGAAAATATTTTA TAGATT TTT AATCTA TTTTTTATTTGGAGA TERM 472 366493 - 366477 - T 70 -8.7 -2.52676 | overlap 366491 GAGTGGTTTAAGGCA GCGGTCT TGA AAACCGC CGATGAGCAATCATC ompA 367643 - 366600 - | outer membrane protein A precursor mviN 369345 - 367801 - | virulence factor MviN TERM 473 368850 - 368829 - G 70 -2.3 -5.62552 | AAAAAAATGAAAAAA CTATTATAC TAAT GTTTAACAG ACTAGAAGAAAGAGA TERM 474 369756 - 369745 - g 80 -4.4 -5.48063 | overlap 369738 369746 ACTTAACAGAAAAAA CTTC TCCT GAAG AATTACAACAAGGTT pyrC 369492 - 370541 + | dihydroorotase flgN 370970 - 370554 - | flagella synthesis protein FlgN flgA 371693 - 371025 - | flagella basal body P-ring formation protein TERM 475 371508 - 371523 + g 86 -3.4 -6.15828 | overlap 371508 CAATGAAAAAACTGG TTTTTT ACAA AAAAAA TTTTTTTTTAATGGA TERM 476 372314 - 372292 - g 71 -5 -4.82518 | overlap 372296 AAAATATGAAGAAAA TTTAGTTTTT ATA AAAAACGAAA TTAAAAATATAATGA flgB 371945 - 372346 + | flagellar basal-body rod protein FlgB flgC 372351 - 372761 + | flagellar basal-body rod protein FlgC flgD 372773 - 373453 + | basal-body rod modification protein FlgD flgE 373509 - 374738 + | flagellar hook protein FlgE flgF 374764 - 375513 + | flagellar basal body rod protein FlgF flgG 375529 - 376311 + | flagellar basal body rod protein FlgG flgH 376389 - 377105 + | flagellar basal body L-ring protein TERM 477 377176 - 377146 - f 91 -9.9 -4.86731 | opp_overlap 377154, overlap 377167 TTTTTTTAAATAAAA CTCATAAGGGATT ATTTA AATCCTTTATGAG TAAAGACTAACATAT TERM 478 378048 - 378033 - g 72 -6.2 -4.28254 | TTCTAATATTCAAAA CATAGA TATT TCTATG CCATCTCAAGAAGCT TERM 479 378238 - 378219 - g 100 -8 -5.54885 | opp_overlap 378232, overlap 378232 AACACTAAGAAAAAA TCAAAAAG AAAG CTTTTTGA AAAATATAATTAATA flgI 377281 - 378408 + | flagellar basal body P-ring protein flgJ 378408 - 378728 + | flagellar protein flgJ TERM 480 379271 - 379281 + G 77 -5.4 -5.03715 | opp_overlap 379271 379269 TTTATGATACTAATA TCGA CAT TCGA TTTTTTCCCACTGCT flgK 378742 - 380376 + | flagellar hook-associated protein 1 TERM 481 380451 - 380395 - T 85 -10.2 -4.30001 | gap 1, opp_overlap 380396 380397 380446, overlap 380397 380409 TAAAAAATTAAACAA TATTTTATAAAAAATAAAAACTTAC TTAAAATG GTAAGTTTTTATTTTTCATAAAA-A TTTTATTTTTAATAA TERM 482 380396 - 380451 + T 100 -10.3 -5.3104 | opp_overlap 380395 380397 380409, overlap 380397 380446 AAAAAATTAAACAAT ATTTTATAAAAAATAAAAACTTACT TAAAAT GGTAAGTTTTTATTTTTCATAAAAA TTTTATTTTTAATAA TERM 483 380450 - 380397 - T 100 -15.3 -3.70344 | opp_overlap 380396 380397 380446, overlap 380395 380409 AAAAATTAAACAATA TTTTATAAAAAATAAAAACTTAC TTAAAATG GTAAGTTTTTATTTTTCATAAAA ATTTTATTTTTAATA TERM 484 380397 - 380450 + T 100 -13.8 -3.76997 | opp_overlap 380397 380395 380409, overlap 380396 380446 AAAAATTAAACAATA TTTTATAAAAAATAAAAACTTACT TAAAAT GGTAAGTTTTTATTTTTCATAAAA ATTTTATTTTTAATA TERM 485 380438 - 380409 - T 82 -6.7 -5.26918 | opp_overlap 380397 380396, overlap 380397 380395 ATATTTTATAAAAAA TAAAAACTTAC TTAAAATG GTAAGTTTTTA TTTTTCATAAAAATT rne 383424 - 380518 - | ribonuclease E TERM 486 380703 - 380730 + g 81 -2.9 -6.02546 | overlap 380703 380721 TATTTTTTGTATTTT CTTTTTTCAAA GTTTTA TTTAAAAAAAG TTTTTTTTGATTTGA TERM 487 381206 - 381216 + g 81 -2.6 -6.06723 | opp_overlap 381206 TTGTTAAAAATAATA TTAT ATA ATAA TTTTTTTTTAAACGA TERM 488 381367 - 381347 - G 78 -4.2 -5.36441 | opp_overlap 381338 TTTGTATATAAAAAA TTATATTT ACTAA AAATATAA AAATTATTTTTTTTT TERM 489 381424 - 381434 + g 79 -4 -5.76949 | overlap 381420 ATCAATAGTATTTTT TTGA AAA TCAA TTTTTTTTAAAGATG TERM 490 381593 - 381616 + g 93 -4 -6.34616 | opp_overlap 381593, overlap 381595 TCTATACTATTAAAC TCTTCTTTTT TAGC AAAAAGAATA TTTTTTTTATTTTGA TERM 491 381595 - 381614 + g 79 -6.6 -4.77908 | opp_overlap 381593, overlap 381593 TATACTATTAAACTC TTCTTTTT TAGC AAAAAGAA TATTTTTTTTATTTT TERM 492 381674 - 381688 + g 84 -5.8 -5.24531 | TTAACAAAAATATGC TTCTTT AAA AAAGAA TTTTTTATCCAAACT TERM 493 381768 - 381780 + g 76 -3.5 -5.4659 | AATTATTGTAATTTT TTTTT CTT AAAAA TTTTTCTTTCTCTTC TERM 494 382340 - 382352 + g 70 -3.5 -5.18357 | ACAATTTCACGTAAT TTATT TTC AATAA TTTTTTGATGACTTA TERM 495 383272 - 383259 - G 86 -6.7 -4.93318 | opp_overlap 383264 CATAATCTATAAAAA CAGCT TCCA AGCTG GGTTCAATTCGAGTA rluC 383734 - 384678 + | ribosomal large subunit pseudouridine synthase rpmF 384782 - 384946 + | ribosomal protein L32 TERM 496 384959 - 384984 + F 77 -7.7 -4.08216 | opp_overlap 384951 384960 384980 384982 384983, overlap 384960 TAATAAATAAAAAAA AGGTACTTTTT TTAA AAAAAGTACCA TTTTAAAAAAAATCA TERM 497 384983 - 384960 - f 100 -11.2 -6.32017 | opp_overlap 384960 384959, overlap 384951 384980 384982 AATAAATAAAAAAAA GGTACTTTTT TTAA AAAAAGTACC ATTTTAAAAAAAATC TERM 498 384960 - 384983 + F 89 -11.2 -3.04715 | opp_overlap 384951 384960 384980 384982, overlap 384959 AATAAATAAAAAAAA GGTACTTTTT TTAA AAAAAGTACC ATTTTAAAAAAAATC TERM 499 385162 - 385141 - g 73 -3.9 -5.40474 | gap 1, opp_overlap 385141 385143, overlap 385145 ATCTTTTTAAAAAAA TATT-TGATG AAG CATCAGAATA TGTTAATTATAATTT TERM 500 385429 - 385417 - g 70 -3.5 -5.1848 | AATTAATGCAAAAAA TTATT ATA AATAA ACCATCTTTAGTACA fabD 385044 - 385976 + | malonyl CoA-acyl carrier protein transacylase TERM 501 386104 - 386087 - g 75 -8.5 -3.30453 | TACAAGTCATAGGAA CATCTAC AACT GTAGATG GAGTAAAAACAATTA fabG 385984 - 386718 + | 3-oxoacyl-[acyl-carrier protein] reductase acpP 386789 - 387028 + | acyl-carrier protein tmk 387085 - 387726 + | thymidylate kinase TERM 502 387799 - 387789 - g 86 -3.2 -5.99154 | CATGAAAGAAAAAAA GCAC ATC ATGC AATTTTAATAAAAAC TERM 503 388276 - 388266 - g 79 -4 -5.70522 | AATAACAACAAAAAA GATA ACA TATC AAATTTGACTTCATT holB 387723 - 388709 + | DNA polymerase III delta' subunit TERM 504 389022 - 389009 - g 79 -3.9 -5.66868 | opp_overlap 389009 AATGAATTAAAAAAA TTATC TTAT GATAA ATGTGTTATAGCATT TERM 505 389194 - 389184 - g 73 -4 -5.28561 | AAGATACAATAAAAA TTCT AAA AGAA GAAAATGCAGAAAAA ycfH 388745 - 389539 + | hypothetical protein TERM 506 389828 - 389841 + G 74 -8.1 -3.49048 | overlap 389829 AATAATGATGGTGTT GCAGC ATTA GCTGC TGTTGTTGCTTACAG TERM 507 390017 - 390030 + G 75 -3.1 -5.52384 | opp_overlap 390009, overlap 390009 390007 TATAAAATTCAGTTA CCTGA ATAT TTAGG TTTTTTTGCTGGAAA TERM 508 390252 - 390236 - g 77 -9.5 -2.97747 | GGTCTACATCATATA TGGAATG TTC CATTCCA AATGCAAATTGGAGA ptsG 389597 - 391030 + | glucose-specific PTS system IIBC components TERM 509 391061 - 391037 - f 95 -7.1 -6.08563 | opp_overlap 391034 391024 391037 AATATATAAAAAAAA GGGTGAGTAAA AAT TTAACTCGCCC TAGTATTTATAAAAT TERM 510 391037 - 391061 + F 74 -9.3 -2.90065 | opp_overlap 391037, overlap 391034 391024 AATATATAAAAAAAA GGGTGAGTAAA AAT TTAACTCGCCC TAGTATTTATAAAAT ycfF 391112 - 391459 + | hypothetical protein TERM 511 391866 - 391922 + T 76 -5.5 -5.10933 | opp_overlap 391863 391867 391882 391889, overlap 391867 391882 TTTAAAGAAAAATTT ACTTTCTACTAAAAAATAAAAAATAAA TTT TTTATTTTTTATAAATCAGTAGAAAGC TTTTATTTTCAATAA TERM 512 391921 - 391867 - T 88 -11.2 -2.95994 | opp_overlap 391867 391866 391882, overlap 391863 391882 391889 TTAAAGAAAAATTTA CTTTCTACTAAAAAATAAAAAATAAA TTT TTTATTTTTTATAAATCAGTAGAAAG CTTTTATTTTCAATA TERM 513 391867 - 391921 + T 79 -9 -3.65475 | opp_overlap 391863 391867 391882 391889, overlap 391866 391882 TTAAAGAAAAATTTA CTTTCTACTAAAAAATAAAAAATAAA TTT TTTATTTTTTATAAATCAGTAGAAAG CTTTTATTTTCAATA TERM 514 391906 - 391882 - T 93 -8.9 -5.14563 | opp_overlap 391882 391867 391866, overlap 391863 391867 391889 CTTTCTACTAAAAAA TAAAAAATAAA TTT TTTATTTTTTA TAAATCAGTAGAAAG TERM 515 391899 - 391889 - T 75 -2.6 -6.04324 | opp_overlap 391882 391867 391866, overlap 391882 391867 CTAAAAAATAAAAAA TAAA TTT TTTA TTTTTTATAAATCAG ompF 393094 - 391985 - | outer membrane protein F precursor TERM 516 393081 - 393096 + g 74 -4.8 -4.92783 | opp_overlap 393081 AATATTGCTAAAGAT TTATGA TTTT TCATAA TTTTTGTACTACCTT asnC 394631 - 393231 - | asparaginyl-tRNA synthetase TERM 517 394034 - 394015 - G 75 -4.4 -5.18561 | opp_overlap 394015 GAAACAGTTAAAAAA GATTCTTT TCCA AAAAAATC TTTTTTAAAATCAAC pncB 395894 - 394698 - | nicotinate phosphoribosyltransferase TERM 518 395419 - 395435 + g 73 -2.4 -5.65927 | overlap 395413 395414 395420 ACATCTCTGTTTTTT TTAAAA AATTC TTTTAA TTTTTTATTTAAATG pyrD 396171 - 397181 + | dihydroorotate dehydrogenase 2 TERM 519 397514 - 397504 - g 74 -2.6 -5.64274 | opp_overlap 397505, overlap 397505 TTATGTATAAAAAAA TTTA CTA TAAA AAATAGTAATGATTT ycbY 397315 - 399408 + | 23S rRNA m(2)G2445 methyltransferase TERM 520 400301 - 400271 - g 70 -6.5 -4.02535 | opp_overlap 400292, overlap 400292 400295 TTATAATCAATGAAA TTAAAAATTATTC AGGAA AAATAATTTTTAA ATTAAAAAATATAAG uup 399433 - 401211 + | ABC transporter ATP-binding protein Uup TERM 521 401238 - 401206 - T 100 -8.1 -5.97575 | opp_overlap 401213, overlap 401207 AATTTAGAAAAAAAA TTATAAATTATTTTT TAA AAAAATAATTTATAG ATGCTGCATACAGTA TERM 522 401237 - 401207 - T 100 -11.6 -4.16105 | opp_overlap 401213, overlap 401206 ATTTAGAAAAAAAAT TATAAATTATTTTT TAA AAAAATAATTTATA GATGCTGCATACAGT yceA 402171 - 401233 - | hypothetical protein TERM 523 401941 - 401927 - G 78 -4.4 -5.42131 | overlap 401920 GAATTATATAAAAAA TTTTTT ACA AAAAAA TAAAATTTTACAGGA TERM 524 402186 - 402196 + r 72 -2.6 -5.75945 | TAAAAAACCTTTAAT TAAA AAT TTTA TTTTTTTTGCAAAAT valS 405063 - 402181 - | valyl-tRNA synthetase TERM 525 402344 - 402363 + g 80 -4.4 -5.51612 | TTAGACATTTTTTTT TCAGAAAT TAAC ATTTTTGA TTTTATTTTTTCTAT TERM 526 404414 - 404434 + g 74 -2.7 -5.69068 | opp_overlap 404416, overlap 404416 CTAGTTGTAGCTACT AATAAATAT TCA ATATTTATA TTTTTTATATTTTTA pepA 406645 - 405137 - | aminopeptidase A/I TERM 527 405207 - 405184 - G 78 -9.6 -3.11966 | opp_overlap 405183 405182 405179, overlap 405182 AAAATTGACTTAATA GTTCAACAGG ACGA CCTGTTGCAC CGTGATTTTTACCAG argF 406816 - 407832 + | ornithine carbamoyltransferase subunit I TERM 528 408015 - 408001 - f 72 -2.8 -5.85244 | opp_overlap 408003, overlap 408003 AAGGAAAATAAAAAA TTGAGA AAT TCTCTA TATAAAAAAAATATA pyrB 408001 - 408936 + | aspartate carbamoyltransferase catalytic subunit TERM 529 408971 - 408959 - g 79 -6.3 -4.7923 | opp_overlap 408958 ATGCAAATAAATAAA CTTCA AGT TGAAG CTATTAAATCTGGTA pyrI 408944 - 409399 + | aspartate carbamoyltransferase regulatory subunit TERM 530 409737 - 409712 - g 80 -4.9 -5.31456 | CTAATTTAGAAAAAA TTCATATAATT AATG AAATATATGAA AAATTTTTTATAGAT yhaR 409462 - 409848 + | hypothetical protein TERM 531 409909 - 409895 - T 89 -11.4 -3.06583 | ATAATATTTTCAATA TGCCGC AAA GCGGCA TAAAATCAAACACTT deaD 411720 - 409915 - | ATP-dependent RNA helicase DeaD pnp 414265 - 412142 - | polynucleotide phosphorylase/polyadenylase TERM 532 414461 - 414446 - R 81 -6.1 -5.32608 | opp_overlap 414446 AAAAAATGTAAAAAA GGGCT AAAAAA AGCCC TTAATTAAAAAATTT rpsO 414808 - 414539 - | 30S ribosomal protein S15 truB 415848 - 414910 - | tRNA pseudouridine synthase B rbfA 416245 - 415871 - | ribosome-binding factor A TERM 533 416290 - 416309 + r 70 -6.6 -3.95352 | AAAAGATATAATTGT CTATAAAT TTAA ATTTATAG TATTCTTTTTATTTC infB 418907 - 416304 - | translation initiation factor IF-2 TERM 534 417010 - 417020 + g 77 -5.4 -4.99665 | TTATTTTTTCTATAG GAAG CTA CTTC TTTTGCTTTTTTTTC TERM 535 417403 - 417420 + g 73 -7.1 -4.0865 | ATATTCTCACCTCCC CATTCTT CCGA AAGAATG TTATATTTTGTTAAA nusA 420411 - 418924 - | transcription elongation factor NusA TERM 536 420477 - 420462 - R 100 -10.4 -5.58179 | opp_overlap 420462 GATTATAATAAAAAA CCCCGA AATT TCGGGG TTTTAGGTAAGATCA TERM 537 420462 - 420477 + r 87 -10.4 -4.1899 | opp_overlap 420462 GATTATAATAAAAAA CCCCGA AATT TCGGGG TTTTAGGTAAGATCA secG 421025 - 420699 - | preprotein translocase subunit SecG TERM 538 421113 - 421092 - R 72 -6.1 -4.66609 | opp_overlap 421086 421092 421098 CATTTTATTTAAAAA TTATTTTAT ACTT ATAAAATAA TTATATTTTTAAATA TERM 539 422725 - 422689 - R 74 -6.8 -4.44974 | opp_overlap 422689 422692 CTAAATTTTAGAAAA CAAGATGAAGCTATAA TCAAT TTATGACTTCATCTTA TTTTAATGCTTATTT TERM 540 422763 - 422747 - R 85 -8.1 -5.08824 | opp_overlap 422735 422746 TGCTTATTTAAAAAA TAATGTG ATT CACATTA AAATTTTATTTCATT ftsH 424666 - 422825 - | cell division protein FtsH ftsJ 425352 - 424732 - | cell division protein FtsJ greA 425894 - 425415 - | transcription elongation factor GreA TERM 541 425739 - 425757 + g 100 -10.4 -5.10933 | ACTTTGTTCTTCTCG TGCTGAAT GAT ATTCAGCA TTTTCTTTTAAGTCG TERM 542 425986 - 426016 + H 78 -7.2 -4.55689 | opp_overlap 425992 426004 426011, overlap 425992 426011 AAACACTATTATTTT TATAAATTTTTTAA ATA TTAAAAAATTTTTA TTTTATATCAGTAAT TERM 543 425992 - 426010 + H 83 -6.2 -5.58522 | opp_overlap 425992 426004, overlap 425986 TATTATTTTTATAAA TTTTTTAA ATA TTAAAAAA TTTTTATTTTATATC yrbA 426286 - 426528 + | hypothetical protein TERM 544 426734 - 426718 - g 70 -8.1 -3.25307 | overlap 426716 TAAGAGACATTAATA TAGCAAT CCA ATTGCTA AAAAGTTTAGGAGCA TERM 545 426967 - 426947 - g 73 -8.3 -3.26471 | opp_overlap 426943 TGATCTTCATATTAA GGGCCTAAT TGC ATTAGGCGC AAAAATTATTTTAGA TERM 546 427623 - 427613 - g 86 -4 -6.01725 | opp_overlap 427613 AATAAAAATAAAAAA CAAT TCT ATTG TCTGTAAAGGTGTTC murA 426564 - 427817 + | UDP-N-acetylglucosamine 1-carboxyvinyltransferase TERM 547 427872 - 427890 + F 81 -6.2 -5.41143 | opp_overlap 427861 427872 427885 AAACTCAAAATTGAA TTTTAATT AAC AATTAAAA TTTTTTTAAAAAATA rplU 427917 - 428240 + | 50S ribosomal protein L21 rpmA 428247 - 428501 + | 50S ribosomal protein L27 TERM 548 428539 - 428560 + F 71 -7.3 -3.8165 | opp_overlap 428539, overlap 428537 428534 TAACTATAGAAAAAA CCCCTTTTT AAAT AAGGAGGGG TATTCTTTTCTTAAA TERM 549 429620 - 429605 - g 82 -6.2 -5.02476 | opp_overlap 429604 429605 ATAGGTGTTAAAAAA CTATGT TCTG ACATAG CATTTTACTTGCAAA obgE 428639 - 429640 + | GTPase ObgE TERM 550 429629 - 429643 + T 72 -2.8 -5.80951 | overlap 429631 GACATAGCATTTTAC TTGCAA AAA TAGCAA TTTTTTCTTTTGACT TERM 551 429733 - 429705 - T 100 -9.7 -5.63645 | opp_overlap 429705 429708 TGAAAACACAAAAAA GAACTCGGTTTAT TAT AAAAACCAAGTTC TTTAAAAAAATTAGT rpsI 430140 - 429748 - | 30S ribosomal protein S9 rplM 430597 - 430157 - | 50S ribosomal protein L13 TERM 552 430826 - 430804 - H 91 -5.8 -6.07374 | overlap 430797 ATAAAAAATAAAAAA TTTTTATATA AAA CATATAAAAA AATATTGATTTATAT TERM 553 431214 - 431204 - g 81 -2.6 -6.10295 | opp_overlap 431204 TTAACACAAAAAAAA TTAT TAA ATAA GTTTTGCAATGATAA TERM 554 431322 - 431340 + G 71 -6.8 -3.92659 | opp_overlap 431314 431322, overlap 431317 AACAAAATTTCAAAA CATGTATT GAA AATGCATG TTTAAGTTTTAACGA TERM 555 431614 - 431600 - g 100 -7.2 -5.626 | opp_overlap 431599 431608 TATTTTATAAAAAAA TTTCCA AAT TGGAAA ATTCAATATACTAAT TERM 556 431667 - 431655 - g 73 -2 -5.64006 | ATGCAATGAAAAAAA TTGT CAAAT ACAA CATAACAACCAATGC pheA 430934 - 432091 + | P-protein TERM 557 433331 - 433316 - g 71 -2.6 -5.46706 | AGGCGAAAATAAAAA TACTCT AAAT AGAATA GAAGCAATTATATAT ffh 432204 - 433556 + | signal recognition particle protein rpsP 433641 - 433898 + | 30S ribosomal protein S16 rimM 433895 - 434422 + | 16S rRNA processing protein RimM TERM 558 435054 - 435029 - g 80 -4.1 -5.57729 | overlap 435037 AAATAATAGAAAAAA TGAAAGTACCA GAAA TATTACTTTCA GGAAATCATGATAAA TERM 559 435153 - 435143 - g 71 -2.6 -5.45813 | TATTAAAAAATAAAA TTTT AAA AAAA GAAGAAAAAATACTT trmD 434413 - 435201 + | tRNA (guanine-N1)-methyltransferase rplS 435240 - 435587 + | 50S ribosomal protein L19 TERM 560 435643 - 435616 - T 75 -8.5 -3.51168 | overlap 435614 AAAAATATTGAAATA TGCAGTCATGA CCTTAT TCTTGACTGCA CCAGTATATATAGAA tldD 437134 - 435683 - | TldD protein TERM 561 435867 - 435883 + g 73 -3.7 -5.41143 | overlap 435862 GTAGTATTTCTAATT GGTGAAA AAA TTTTGCC TTTTTTTACCAAATA TERM 562 437146 - 437158 + H 72 -3.5 -5.62045 | overlap 437140 TCATTTGAATTCACT TTTTA AGT TAAAA TTTTTTATTGTATAT TERM 563 437164 - 437186 + H 79 -6.5 -5.0133 | TAAGTTAAAATTTTT TATTGTATA TTTAT TATACAATA TTTTTTAAAGAAATA TERM 564 437211 - 437243 + H 91 -9.5 -4.72272 | opp_overlap 437210 437209 437220 437222 GAAATAAACAATATT TTTTATAGATATTAT TGT ATAATATCTTTAAAA TTTTTAATAAAAAAC aroD 437283 - 437738 + | 3-dehydroquinate dehydratase fis 438142 - 437843 - | factor-for-inversion stimulation protein rluD 439233 - 438286 - | ribosomal large subunit pseudouridine synthase D yfiO 439399 - 440130 + | hypothetical protein TERM 565 440723 - 440708 - g 72 -9 -2.75294 | overlap 440707 GCAAATGGGTGAAAC TGGACC TTGT GGTCCA TGTACAGAAATATTT TERM 566 442311 - 442327 + G 77 -5.2 -5.09259 | opp_overlap 442292 442310 442311 442313 CATATTAAAGACAAT GATATG CAAAA CATATC TTTTCTTTTAAAATG TERM 567 442480 - 442468 - g 79 -3.5 -5.66868 | AATTAAGTAAAAAAA TTAAT AAT ATTAA AGGAATAAATTTATT alaS 440181 - 442832 + | alanyl-tRNA synthetase csrA 443030 - 443212 + | carbon storage regulator TERM 568 443223 - 443251 + F 100 -9.7 -5.60993 | opp_overlap 443222 443223, overlap 443224 GTTGATAATAAATAC TGCATCTTACTTA CTT TAGGTAAGATGCC TTTTTTTATAAGAAA TERM 569 443224 - 443250 + F 100 -13.2 -3.95873 | opp_overlap 443223 443222, overlap 443223 TTGATAATAAATACT GCATCTTACTTA CTT TAGGTAAGATGC CTTTTTTTATAAGAA TERM 570 443506 - 443490 - f 70 -8.7 -2.69468 | overlap 443502 CAGTTGGATAGAGTA CTCGGCT ACG AACCGAG CGGTCGGAGGTTCGA TERM 571 443688 - 443674 - g 74 -2.9 -5.79526 | ATATCTCAAAAAAAA TTTCT TGGCT AGAAA AAAATCCTGAAATAA TERM 572 444000 - 443983 - g 79 -8.5 -3.72784 | TTTATAATAAATCAA CAGCTAT TAAA ATAGCTG AATACGGAACCTCTC TERM 573 444937 - 444923 - g 77 -5.8 -4.7629 | TTATCAATCTAAAAA TTTTGA ATA TCAAAA AGCATGTCAAGAAAC gshA 443649 - 445205 + | glutamate--cysteine ligase TERM 574 445220 - 445181 - T 100 -10.4 -5.81412 | gap 1, opp_overlap 445186, overlap 445186 TTCATTTAAAAAAAA TAATT-TCTCCCATGCTAA CAA TTAACATGGGAAATAATTA AAAATCAACATAATT TERM 575 445214 - 445186 - T 89 -11.9 -2.71967 | opp_overlap 445186, overlap 445181 TTAAAAAAAATAATT TCTCCCATGCTAA CAA TTAACATGGGAAA TAATTAAAAATCAAC metK 446465 - 445326 - | S-adenosylmethionine synthetase TERM 576 446609 - 446599 - H 72 -2.6 -5.80951 | opp_overlap 446599, overlap 446592 446606 ATTTAAAATAAAAAA TAAA GAA TTTA TTATTTAATAAAATT TERM 577 448042 - 448011 - g 75 -3.3 -5.59879 | gap 1 TAGAAATAGAAAAAA TAATTCAATATGGA TTTAT TCC-TATTAAATTA GGACCTAGAATTTTA TERM 578 448094 - 448068 - g 72 -6.6 -4.34263 | opp_overlap 448070, overlap 448062 448070 TTTTAAGAACAGAAA CAGCTGTAATTG CAG CAATTACTGCTT TACAAATAAAATTTG TERM 579 448070 - 448092 + G 79 -9.2 -3.5764 | opp_overlap 448062 448068 448070 TTAAGAACAGAAACA GCTGTAATTG CAG CAATTACTGC TTTACAAATAAAATT TERM 580 448092 - 448070 - g 81 -9.2 -3.76767 | opp_overlap 448070, overlap 448062 448068 TTAAGAACAGAAACA GCTGTAATTG CAG CAATTACTGC TTTACAAATAAAATT yggJ 447383 - 448123 + | hypothetical protein ygfA 448719 - 448120 - | hypothetical protein rpiA 449448 - 448789 - | ribose-5-phosphate isomerase A TERM 581 449408 - 449421 + g 79 -3.7 -5.72053 | TAGATATAATCTAGC GCAGC CCAT GCCGC TTTTTTCTTTAATTC TERM 582 449943 - 449927 - H 74 -5.3 -5.00027 | opp_overlap 449927 449922 ATTAAAAATAGAAAA TATTTTT TAA AAAAATA ATACTTTCTTTATTT TERM 583 450041 - 450027 - H 71 -2.2 -5.71712 | TTTTATATAAAAAAA TCAAAT GAG ATTTAA AAAAATGAACAATAA TERM 584 450097 - 450072 - g 74 -7.9 -3.59802 | opp_overlap 450075 450078, overlap 450075 450078 AATAGAAAAAAATGA TAATAATTTTA TTTA TAAAATTATTA ATGAAGATTTCAAAA TERM 585 450819 - 450849 + G 75 -8.4 -3.31232 | opp_overlap 450817 450819, overlap 450818 TTATTCAAAACAATA TGAGTTCTCTAGAT TAA ATCTAGAATACTCA ATTTTATCTAAAAGA TERM 586 450849 - 450819 - g 89 -10.6 -3.70622 | opp_overlap 450819 450818, overlap 450817 TTATTCAAAACAATA TGAGTTCTCTAGAT TAA ATCTAGAATACTCA ATTTTATCTAAAAGA TERM 587 450886 - 450869 - g 90 -5.7 -5.48213 | TATCTAAAAGAAAAA TTTCAAT TTTA ATTGAAA AAAAAATAGTTAACG glnS 450031 - 451734 + | glutaminyl-tRNA synthetase TERM 588 452575 - 452560 - g 93 -3.3 -6.25578 | opp_overlap 452560 ACGAAAGAAAAAAAA TTGCA TTATTT TGCAA TGTTCCAGTGAATGC pyrG 451890 - 453551 + | CTP synthetase eno 453544 - 454848 + | enolase ygcF 454946 - 455605 + | hypothetical protein ygcM 455983 - 455621 - | putative 6-pyruvoyl tetrahydrobiopterin synthase TERM 589 456397 - 456420 + r 84 -5.4 -5.81032 | opp_overlap 456397 456401 TTGTATAGGCCAAGA CCAATTATTA GAAA TAATAATCGG TTTTTTTTGCGATTG TERM 590 456731 - 456745 + r 75 -2.8 -5.88471 | opp_overlap 456731 AAATGTTTAGATATA GAATAC AGT GTATCC TTTTTTTTGATAATA TERM 591 456804 - 456826 + r 75 -3.6 -5.75342 | opp_overlap 456809, overlap 456791 456809 456825 AATAGATAATATATT TATAATTTTT GAT AAAAATTTTA TTTTTTTTAGAAAAA TERM 592 456825 - 456843 + r 78 -4 -5.80727 | overlap 456804 456809 456834 TTTTGATAAAAATTT TATTTTTT TTA GAAAAATA TTTTTTATTATTTTT ygbB 457645 - 457142 - | hypothetical protein ygbP 458371 - 457661 - | hypothetical protein TERM 593 458157 - 458179 + g 83 -9.4 -3.72027 | opp_overlap 458157 458159 458162, overlap 458162 AAATCAGATGATATA GATAATTTTT GAA AAAAATTATC TTCTTGATGCAAACT TERM 594 458179 - 458157 - G 77 -9.4 -2.99834 | opp_overlap 458157 458162, overlap 458159 458162 AAATCAGATGATATA GATAATTTTT GAA AAAAATTATC TTCTTGATGCAAACT ygbQ 458629 - 458429 - | hypothetical protein cysC 459287 - 458652 - | adenylylsulfate kinase TERM 595 464367 - 464379 + r 86 -6.3 -5.84381 | CCATCGAATTTTCAC GTAAG GAA CTTAC TTTTTTTATTAATCC TERM 596 465601 - 465617 + r 85 -6.7 -5.38321 | overlap 465609 ATTCGCTCTTCTTTA GTATTTT TTA AAAATAC TTTTTTATAATCTTT cysJ 467446 - 465638 - | sulfite reductase (NADPH) flavoprotein alpha-component TERM 597 466349 - 466365 + g 100 -5.9 -5.82316 | overlap 466336 AGGATGATCATATAT CATCTTT AAC AAAGGTG TTTTTTTTACATAGT TERM 598 467467 - 467488 + r 71 -7.5 -3.92143 | opp_overlap 467464 467484, overlap 467484 TAAATGCCTAAAGTT TATTAGTTT TAAA AAACTAATA TTATTAATTTAGTAT mutS 469984 - 467567 - | DNA mismatch repair protein TERM 599 467643 - 467626 - G 75 -8.5 -3.4072 | CATCTTGTATTACAA TATCTGG AATC CCAGATA AAGAAGCTACTGCTA TERM 600 467764 - 467745 - G 73 -2.3 -5.69262 | opp_overlap 467739 467754 467755 467757, overlap 467739 GCAGAAAAATAAAAA TTTTTTA TATTTT TAAAAAA ATTTTCTAATTTTGT TERM 601 470526 - 470498 - g 74 -5.5 -4.76213 | opp_overlap 470522 AGAAATTCAAGAAAA TAATACTATAAGT CAT ACTTCTAATATTA AAAATATATTTTTGC dsbA 470145 - 470774 + | thiol:disulfide interchange protein DsbA precursor pol 471064 - 471927 + | DNA polymerase I yihA 472546 - 471941 - | GTPase EngB TERM 602 472199 - 472185 - G 70 -7.2 -3.64049 | overlap 472177 TCAAGAATTTTTAAA GGATAT CTA ATATCC ATTAACAAAACTAAT typA 472763 - 474592 + | GTP-binding protein BipA TERM 603 474622 - 474664 + T 95 -11.1 -4.18018 | opp_overlap 474626 474634 AAAAATCAACTTTTA TTAATTATATAATTCTATT TTCTC AATAGAATTATATAAATAA TTTTAAATAAAAAAA TERM 604 474660 - 474626 - T 91 -11.9 -3.16921 | opp_overlap 474622, overlap 474634 ATCAACTTTTATTAA TTATATAATTCTATT TTCTC AATAGAATTATATAA ATAATTTTAAATAAA gmk 475332 - 474709 - | guanylate kinase TERM 605 475394 - 475373 - R 72 -3.1 -5.75342 | opp_overlap 475376, overlap 475358 475376 TTTTTGCAAAAAAAA GAATTTTTT TTAA AAAAAAATC ATTAAATAAAAAATA TERM 606 475392 - 475376 - R 74 -5.3 -4.96028 | opp_overlap 475376, overlap 475358 475373 TTGCAAAAAAAAGAA TTTTTTT TAA AAAAAAA TCATTAAATAAAAAA ygfZ 476369 - 475410 - | hypothetical protein TERM 607 478261 - 478280 + G 89 -7.8 -4.81852 | TTACATAATATTCCT GGTGGAGC AAAT GCTCGACC TTTTATTACTTATCA lysS 477625 - 479136 + | lysyl-tRNA synthetase lysA 479204 - 480451 + | diaminopimelate decarboxylase TERM 608 481864 - 481848 - g 91 -2.3 -6.41805 | GTATTAAAAAAAAAA TTAAGTT GTC AACTTTA CCAACGTTCTTGCGA thyA 481374 - 482168 + | thymidylate synthase yleA 482212 - 483531 + | hypothetical protein TERM 609 483672 - 483656 - f 100 -6.7 -6.53504 | TATATAAAAAAAAAA TGTTAAT TTA ATTAACA TTAGAATTGTTGACG ybeY 483696 - 484013 + | hypothetical protein TERM 610 483997 - 484013 + F 80 -4.5 -5.60993 | opp_overlap 483991 483990 483995, overlap 483995 ATGAAAAACCATATT TTATGAA AAG TTCGTAA TTTTTTTATAAAAAA ybeX 484100 - 484975 + | hypothetical protein TERM 611 487616 - 487599 - g 100 -5.7 -6.09133 | opp_overlap 487598 CATTTGAAAAAAAAA TTTTATC TTCA GATAAAA ATACATTAATTATAC TERM 612 487744 - 487734 - g 81 -2.6 -6.11644 | TTATTCAAAAAAAAA TAAA AAA TTTA AAAATAATTAAAATA leuS 485213 - 487798 + | leucyl-tRNA synthetase holA 487834 - 488850 + | DNA polymerase III delta subunit TERM 613 489336 - 489353 + G 81 -2.7 -6.06723 | opp_overlap 489325 GTAATTTATTACATA AAAAACC ATTT GGTTTTA TTTTTTTTTCAAAAA ybeN 488855 - 489505 + | hypothetical protein yhhP 489502 - 489762 + | hypothetical protein TERM 614 489850 - 489818 - T 100 -12.3 -4.94243 | opp_overlap 489820 489824 489840 489849, overlap 489820 489849 GTAAAAAAATCAAAA GATTAATATACACAC TGG GTGTGTATATTAATA TATACTATATAATTA TERM 615 489848 - 489820 - T 100 -14.9 -4.05035 | opp_overlap 489820 489824 489840, overlap 489818 AAAAAAATCAAAAGA TTAATATACACAC TGG GTGTGTATATTAA TATATACTATATAAT TERM 616 489820 - 489848 + T 100 -14.9 -2.99813 | opp_overlap 489820 489818, overlap 489824 489840 AAAAAAATCAAAAGA TTAATATACACAC TGG GTGTGTATATTAA TATATACTATATAAT TERM 617 489824 - 489844 + T 91 -11.3 -3.34534 | opp_overlap 489820 489818, overlap 489820 489840 AAATCAAAAGATTAA TATACACAC TGG GTGTGTATA TTAATATATACTATA asd 490999 - 489884 - | aspartate-semialdehyde dehydrogenase TERM 618 490429 - 490413 - G 73 -6.7 -4.09656 | opp_overlap 490413 TCTAAAACAGAATAA GATTTAT CTA ATAAATC TTTAGAAACGACATT TERM 619 491600 - 491624 + G 77 -5.7 -4.90013 | opp_overlap 491600 491605 491619 CGATGAAGGTAACAA TGGAACTTCTT CAG AAGAAGAACCA TTTTTAGTTCCATTA yhgN 491313 - 491903 + | dITP- and XTP- hydrolyzing protein TERM 620 492009 - 491974 - g 78 -2.8 -5.94597 | TAACAGGAAAAAAAA TTTTAATAAGAACA GATTTAAA TGTTCCTATAAAAA ATGGCGTGATTCAAT TERM 621 492100 - 492081 - g 77 -2.2 -5.81412 | opp_overlap 492083, overlap 492064 492083 GCTATTGAAAAAAAA GCTAAAAT AATT ATTTTATC TCATTTAGGACGTCC pgk 491928 - 493094 + | phosphoglycerate kinase fba 493144 - 494223 + | fructose-bisphosphate aldolase yggB 494421 - 495272 + | hypothetical protein TERM 622 495286 - 495269 - f 88 -5.7 -5.94743 | TAAAAAAAATAAAAA TTAGTTA TTTC TAACTAA TACTAGATTGTTGTT TERM 623 497263 - 497245 - gf 93 -4.7 -6.07627 | ATTCCTAAAAAAAAA TTAAGTT CTTTT AACTTAA TCGATAAATATCCAT TERM 624 497644 - 497631 - gf 70 -3.9 -5.24129 | opp_overlap 497619 497616 497631 TTTTTCTATAAAAAA TAGAA TAAT TTCTA CTTCTACTCAAATAA TERM 625 498331 - 498321 - gf 83 -4 -5.9873 | CTATGATAAAAAAAA TGAT TGT ATCA AAAAAAACGATGATA recC 495334 - 498519 + | exodeoxyribonuclease V 125 kDa polypeptide TERM 626 498576 - 498552 - gf 86 -2.3 -6.25242 | overlap 498559 498561 498568 498570 ATAATGAAAAAAAAA TTAAATATATT TCA AATACCTTTAA AAGGAATCCACTTAA TERM 627 499425 - 499412 - gf 74 -2.5 -5.75478 | opp_overlap 499412 AAGTATAGAAAAAAA TATAA AAAA TTATA ATTTTAAAAAACATA TERM 628 499491 - 499478 - gf 87 -2.5 -6.21477 | AATATTAAAAAAAAA TTTTT CTCT AAAAA ATATAATTTTATTTT TERM 629 499915 - 499901 - gf 72 -4.4 -5.03314 | opp_overlap 499884 499901 499910 499914, overlap 499886 TTTATTTTCAAAAAA TAAAAA TCC TTTTTA TTTTAAAAATATTCC TERM 630 501506 - 501488 - gf 70 -6.2 -4.06419 | opp_overlap 501498, overlap 501498 501505 GTTTTGGATAAACAA TATTTTAA ATT TTAAAATA AATAATTTAAATATT recB 498483 - 502022 + | exodeoxyribonuclease V 135 kDa polypeptide TERM 631 502443 - 502426 - g 71 -2.8 -5.58454 | TTTATATGAAAAAAA TCAATT TGATAC AATTGA TACACAACAATGTTT TERM 632 503211 - 503190 - g 83 -4.6 -5.56573 | opp_overlap 503190, overlap 503184 ATAAAGAAACAAAAA TTTTTGAA AAATTA TTCAAAAA CTCGATAGAAAACGT TERM 633 503590 - 503578 - g 100 -6.3 -5.47218 | opp_overlap 503576 503578 503588 503589 TCTTAGTCAAAAAAA TACCT TAC AGGTA TCTTTTTTAAAGAAA TERM 634 503578 - 503590 + G 70 -6.3 -4.13561 | opp_overlap 503578, overlap 503576 503588 503589 TCTTAGTCAAAAAAA TACCT TAC AGGTA TCTTTTTTAAAGAAA recD 502034 - 503842 + | exodeoxyribonuclease V 67 kDa polypeptide argA 505191 - 503863 - | N-acetylglutamate synthase TERM 635 506408 - 506379 - g 93 -7.3 -5.20328 | overlap 506364 506361 CTTGAAAAAAATAAA TCCTTTGTTTTCT TTCA AGAAACCAAAAGA AAAGAGGTATACGGT mltA 505593 - 506693 + | murein transglycosylase A TERM 636 506737 - 506725 - g 93 -4.9 -6.11019 | AAAAAGGAAAAAAAA TGAAT ATA ATTCA ATCAGGAATCAACGT TERM 637 506783 - 506759 - g 70 -5.1 -4.68506 | AATCAACGTTAAAAA TGCTTCTATTA CTA TAATAATAGCA AGATTTAATGAATTT ribH 506724 - 507203 + | 6,7-dimethyl-8-ribityllumazine synthase TERM 638 508157 - 508141 - g 93 -3.1 -6.31682 | AAAATCAAAAAAAAA TAATTTT TAA AAAATCA GGTTTTAATCATTTT thiL 507207 - 508178 + | thiamine-monophosphate kinase ribD1 508202 - 508645 + | riboflavin biosynthesis protein RibD ribD2 508664 - 509317 + | riboflavin biosynthesis protein RibD TERM 639 509520 - 509502 - g 77 -9 -3.40073 | opp_overlap 509502, overlap 509515 ATTTCTATGAATTAA TTATAGGT ATA ACCTATAA TTGTAGAAGTATAGA TERM 640 509502 - 509520 + G 77 -9 -3.32343 | opp_overlap 509502 509515 ATTTCTATGAATTAA TTATAGGT ATA ACCTATAA TTGTAGAAGTATAGA nusB 509330 - 509758 + | transcription antitermination protein NusB dxs 511542 - 509785 - | 1-deoxy-D-xylulose-5-phosphate synthase ispA 512446 - 511562 - | geranyltranstransferase yajR 513703 - 512543 - | hypothetical protein TERM 641 512800 - 512788 - G 100 -6.3 -6.15536 | opp_overlap 512788 AAGCAATAAAAAAAA TTTGC AAA GCAAA TGTTAAACATATCAG TERM 642 513095 - 513080 - G 72 -3.4 -5.28315 | opp_overlap 513083, overlap 513073 513083 ATAAAATCTAAAAAA TATTTT ATTA AAAATA AACTTTATTTTTTTC yccK 513763 - 514107 + | hypothetical protein cyoE 514965 - 514111 - | protoheme IX farnesyltransferase cyoD 515322 - 514996 - | cytochrome O ubiquinol oxidase D cyoC 515891 - 515322 - | cytochrome O ubiquinol oxidase C TERM 643 515421 - 515406 - G 70 -6.2 -4.05172 | opp_overlap 515405 515403 515406 515408 TAAACTAAAACATAA TATTCG AATG CGAATA GTGTTAGTTATTCCT TERM 644 515501 - 515489 - G 89 -4.1 -6.02546 | TTAAACCAAAAAAAA CATGA ATA CCATG AACACCAACAATGGT cyoB 517867 - 515888 - | cytochrome O ubiquinol oxidase B TERM 645 516967 - 516957 - G 70 -5.4 -4.56597 | opp_overlap 516957 CGTTTTTTTGAAAAA GTAG CAA CTAC TTCTGAAAATACACC cyoA 518779 - 517907 - | cytochrome O ubiquinol oxidase A bolA 519108 - 519443 + | BolA protein TERM 646 520017 - 520001 - g 82 -6.7 -4.90136 | opp_overlap 520004, overlap 520004 AATGAAGACCAAAAA GAATATT TCA AATATTC TGTAAACTACGAAGT tig 519698 - 521026 + | trigger factor TERM 647 521078 - 521068 - f 72 -2.6 -5.69473 | opp_overlap 521068 TATATTAGAAAAAAA TTTT ATA AAAA TATCTTTTATGCCAA clpP 521153 - 521746 + | ATP-dependent Clp protease proteolytic subunit clpX 521832 - 523115 + | ATP-dependent protease ATP-binding subunit TERM 648 525300 - 525288 - g 76 -6.3 -4.72986 | opp_overlap 525278 525288 GATTTTCATGAAAAA CATGA TAT TCATG TTCATGTTCCCGAAG lon 523305 - 525638 + | ATP-dependent protease LA TERM 649 525652 - 525673 + F 74 -7.3 -4.14725 | AAAAGATCTAAATTT GGCTGAC AAAAAACC GTCAGCC TTTATAATTTAAATA TERM 650 525720 - 525702 - f 76 -4.7 -5.31158 | TAAAAAAATTAAAAA TTTCAAT ATAAA ATTGAAA CTATCTAGGATAGTT TERM 651 525990 - 525980 - g 81 -2.6 -6.07969 | GAAAATTAAAAAAAA TAAA AAA TTTA AAGAAGAAACATATA TERM 652 526248 - 526258 + G 70 -5.4 -4.68724 | TTAATAAATGCTATT TCTG AAA CAGA TTTTATATTAGATAA TERM 653 526303 - 526286 - g 100 -5.7 -5.87996 | TAATGAACAAAAAAA GATAATA AAGC TATTATC TGAAAAAAGAATTAT TERM 654 526848 - 526831 - g 78 -2.7 -5.9667 | opp_overlap 526831 526833, overlap 526833 AAAAATACAAAAAAA TATCTGA AGTA TCAGATC TTATTGAAAATGAAA TERM 655 526846 - 526833 - g 70 -5.3 -4.5577 | opp_overlap 526833 526831, overlap 526831 AAATACAAAAAAATA TCTGA AGTA TCAGA TCTTATTGAAAATGA TERM 656 527439 - 527429 - g 76 -4 -5.50723 | opp_overlap 527429 GTATCAAAATAAAAA CAAA AAT TTTG TTATTGCATTATTAG ppiD 525741 - 527606 + | peptidyl-prolyl cis-trans isomerase D ybaX 528360 - 527662 - | hypothetical protein mdlA 528591 - 530336 + | multidrug resistance-like ATP-binding protein Mdl TERM 657 530579 - 530594 + G 86 -3.2 -6.00814 | GTGATATTCATAATG CTGCAA ATAT TAGCAG TTTTTTTTAATTATT mdlB 530360 - 532102 + | multidrug resistance-like ATP-binding protein MdlB dnaX 532404 - 533495 + | DNA polymerase III subunits gamma and tau ybaB 533552 - 533881 + | hypothetical protein TERM 658 534134 - 534108 - g 82 -9.6 -3.54382 | opp_overlap 534110 TTTTAAGAGAATTAA TATCTAATGCAT CAG ATGCAATAGATA AATTAAGATTTCAAT TERM 659 535269 - 535253 - g 72 -4.5 -4.91511 | overlap 535255 ATTTCACTAGAAAAA TACATAT CTA ATATGCA TGAAAAACAAGAAAA TERM 660 535562 - 535548 - g 81 -2.9 -6.11019 | AAAAAGTAAAAAAAA CTTTA GGTGA TAAAG TAAAATCAGTACGGT htpG 533996 - 535873 + | heat shock protein 90 TERM 661 535915 - 535871 - f 78 -8.9 -3.82191 | opp_overlap 535880, overlap 535877 535880 TTAATTTTAGAACAA TAAAAATATGATTACTACTTT TTT ATAGTAGTAATCTTACTCTTA AAATAATCTTTTAAA TERM 662 535909 - 535877 - f 93 -7.9 -5.34365 | opp_overlap 535880, overlap 535871 535880 TTAGAACAATAAAAA TATGATTACTACTTT TTT ATAGTAGTAATCTTA CTCTTAAAATAATCT TERM 663 535906 - 535880 - f 75 -9.6 -3.14752 | opp_overlap 535880, overlap 535877 535871 GAACAATAAAAATAT GATTACTACTTT TTT ATAGTAGTAATC TTACTCTTAAAATAA TERM 664 535880 - 535906 + F 78 -9.6 -3.37245 | opp_overlap 535877 535871 535880 GAACAATAAAAATAT GATTACTACTTT TTT ATAGTAGTAATC TTACTCTTAAAATAA TERM 665 536505 - 536467 - g 70 -2 -5.5943 | overlap 536459 536482 AAACTACGAAAAAAA TTCTTTTTTACTAAATAA ATA TTATTTAAGAGAAAAAAA ATTAAAAAAGTTGCA adk 535946 - 536590 + | adenylate kinase TERM 666 536642 - 536656 + F 70 -7.8 -3.322 | CGAACCTGTGACCTA CGGCTT AGA AGGCCG TTGCTCTATCCAGCT folD 536830 - 537687 + | methenyltetrahydrofolate cyclohydrolase cysS 539097 - 537706 - | cysteinyl-tRNA synthetase TERM 667 539168 - 539185 + H 81 -5.7 -5.60993 | opp_overlap 539167 539168 539170 ATATGTTAAACTAAT TAGATAT ATTA ATATCTA TTTTTTTATAAAAAA ybeD 539292 - 539555 + | hypothetical protein TERM 668 539601 - 539574 - T 83 -10.7 -3.68662 | opp_overlap 539600, overlap 539567 ATATAAGATCCTAAA TAGTACAGCTC GATAAA GAGCCGTACTA AAAAAGATTTTTATT TERM 669 539600 - 539614 + T 75 -4.4 -5.63517 | opp_overlap 539574 539567 GATAAAGAGCCGTAC TAAAAA AGA TTTTTA TTTTTTATTTAAAAA cspE 539844 - 539635 - | cold shock protein CspE TERM 670 539891 - 539910 + r 72 -6.6 -4.30576 | opp_overlap 539890 539908 AAATTGAAAAAAGTG TCATTTAT GATT ATAAATGA TTTTCATCATAAAAA TERM 671 540136 - 540101 - R 100 -19.4 -3.61103 | opp_overlap 540101 540111, overlap 540111 CAATTTTATTTCAAA TACAAAAAAACCCGAA AATT TTCGGGTTTTTTTGTA TTTGCCTGGCTGATA TERM 672 540101 - 540136 + r 100 -19.4 -3.67296 | opp_overlap 540101 540111, overlap 540111 CAATTTTATTTCAAA TACAAAAAAACCCGAA AATT TTCGGGTTTTTTTGTA TTTGCCTGGCTGATA TERM 673 540126 - 540111 - R 100 -9 -5.88197 | opp_overlap 540111 540101, overlap 540101 TCAAATACAAAAAAA CCCGAA AATT TTCGGG TTTTTTTGTATTTGC TERM 674 540111 - 540126 + r 100 -9 -5.88197 | opp_overlap 540101 540111, overlap 540101 TCAAATACAAAAAAA CCCGAA AATT TTCGGG TTTTTTTGTATTTGC TERM 675 540349 - 540339 - R 82 -6.8 -5.24531 | opp_overlap 540339 ATTTTTTATAAAAAA CACC TCT GGTG TTGTAAGGTTAAGCC TERM 676 541973 - 541989 + r 77 -8 -4.08546 | TTAGTTTTTCGGCGA GCAGGT TTTTC ACCTGC TTTATCGTTACTCAT TERM 677 543427 - 543439 + r 75 -3.5 -5.73978 | opp_overlap 543427, overlap 543432 AAATAGTATACAATA TTTTT TAA AAAAA TTTTTTATTTATCGT TERM 678 543682 - 543643 - R 81 -3.2 -6.08563 | opp_overlap 543656 543670, overlap 543656 543670 AATATATAAAAAAAA TAAATATTAAACATTTTT TAAA AAAATTATTTTATATTTA AAATATTAATAATAT aroE 544490 - 543669 - | shikimate 5-dehydrogenase TERM 679 544281 - 544314 + g 78 -3.2 -5.75342 | opp_overlap 544288, overlap 544273 544283 AAAATACGCTTCTTT TTTAAAAGGTGCTG TTACAT TAGCACCTTTAATA TTTTTTTTAAAAAAA TERM 680 544283 - 544312 + g 71 -5.8 -4.52949 | opp_overlap 544288, overlap 544273 544281 AATACGCTTCTTTTT TAAAAGGTGCTG TTACAT TAGCACCTTTAA TATTTTTTTTAAAAA yrdC 545055 - 544483 - | hypothetical protein TERM 681 544637 - 544656 + g 70 -6.4 -4.08064 | opp_overlap 544637 ATATTTGAAATATTA GCACTTGT AGAT ACCAGTGC TTTTCCAAAAACATT smg 545553 - 545080 - | Smg protein TERM 682 545306 - 545322 + g 86 -6.7 -4.92669 | opp_overlap 545306 545309 AAACCACGACAATCA GAATTTA ATT TAAATTC TTCTTTTTTTGTATA TERM 683 545783 - 545759 - H 70 -8.1 -3.29109 | overlap 545749 AAAAGTTTATACTAA GATATAAATTA AAT TAATTTACATC TAAAAATATGTCTGT TERM 684 546277 - 546265 - g 76 -3.5 -5.48303 | AGAATTTTAAAAAAA TTAAT AAA ATTAA AAAAAAGAATAAAAT def 545791 - 546294 + | polypeptide deformylase fmt 546330 - 547274 + | methionyl-tRNA formyltransferase TERM 685 547352 - 547330 - T 78 -9.2 -3.44212 | opp_overlap 547330, overlap 547328 547327 AACATTAAAAAATGA GCAAACGG CGACCTT CCGTTTGC TTTATATTATAAATA TERM 686 547330 - 547352 + T 83 -9.2 -4.28188 | opp_overlap 547330 547328 547327 AACATTAAAAAATGA GCAAACGG CGACCTT CCGTTTGC TTTATATTATAAATA rplQ 547813 - 547397 - | 50S ribosomal protein L17 TERM 687 547759 - 547740 - G 76 -9.4 -2.77858 | overlap 547739 547737 AGAATTAAAGAACAG GCCATATT TTTA AATATGGC ATTACGATGATCACT rpoA 548857 - 547868 - | DNA-directed RNA polymerase subunit alpha rpsD 549506 - 548886 - | 30S ribosomal protein S4 rpsK 549924 - 549532 - | 30S ribosomal protein S11 rpsM 550298 - 549942 - | 30S ribosomal protein S13 rpmJ 550527 - 550411 - | 50S ribosomal protein L36 secY 551880 - 550561 - | preprotein translocase subunit SecY TERM 688 551701 - 551685 - G 71 -6.7 -3.85254 | CACCACCAGAAAACA TATTGAA CAT TTCAATA ATAGTGCCTTTCTGA rplO 552325 - 551891 - | 50S ribosomal protein L15 TERM 689 552019 - 552029 + g 71 -2.6 -5.55855 | overlap 552009 CATATTTAATATTTT TATT AAT AATA TTTTCTTTTTTTAAA TERM 690 552337 - 552359 + r 78 -7.2 -4.6341 | GCATCTTATCATTCC TCTTGTATTT TTA AAATATAAGA TATTTTTTTTATCAT rpmD 552509 - 552330 - | 50S ribosomal protein L30 rpsE 553021 - 552518 - | 30S ribosomal protein S5 rplR 553402 - 553037 - | 50S ribosomal protein L18 rplF 553940 - 553404 - | 50S ribosomal protein L6 rpsH 554343 - 553951 - | 30S ribosomal protein S8 rpsN 554679 - 554374 - | 30S ribosomal protein S14 rplE 555236 - 554697 - | 50S ribosomal protein L5 TERM 691 555288 - 555260 - R 70 -7.7 -3.19038 | opp_overlap 555260 555259 TCCAAAACTATTTAA TCGTTTTTTTA TTAGATT TAAAAAAACGA ACTTTTTTCCCTTCT rplX 555566 - 555252 - | 50S ribosomal protein L24 TERM 692 555546 - 555530 - G 73 -6.7 -4.07568 | opp_overlap 555544, overlap 555533 CTTTTCCTGTTAAAA TAATGAT TTC ATCATTA CGACGTAATTTTAAT rplN 555958 - 555590 - | 50S ribosomal protein L14 TERM 693 556045 - 556070 + r 89 -9.1 -4.57073 | opp_overlap 556045 556040 CAAATAGATATAAAA CATGAGCAGAC CTAA GTTTGTTCATG TTTTTAAAAAAAATA rpsQ 556344 - 556090 - | 30S ribosomal protein S17 rpmC 556538 - 556341 - | 50S ribosomal protein L29 rplP 556948 - 556538 - | 50S ribosomal protein L16 rpsC 557662 - 556961 - | 30S ribosomal protein S3 rplV 558014 - 557682 - | 50S ribosomal protein L22 rpsS 558311 - 558033 - | 30S ribosomal protein S19 rplB 559149 - 558328 - | 50S ribosomal protein L2 rplW 559467 - 559165 - | 50S ribosomal protein L23 TERM 694 559323 - 559335 + g 72 -6.3 -4.21644 | opp_overlap 559322 559318 559323, overlap 559313 GAATATTAAATAAAT TTTGC ACT GCAAA TTTAATTTCATTTTT rplD 560069 - 559464 - | 50S ribosomal protein L4 rplC 560716 - 560087 - | 50S ribosomal protein L3 TERM 695 560130 - 560146 + g 72 -6.5 -4.26076 | AGATCACTACCGGTA GGTCCTG GAA CAGCACC TTTTACTAAAAGTAA rpsJ 561064 - 560753 - | 30S ribosomal protein S10 TERM 696 560944 - 560973 + g 86 -9.3 -4.26188 | opp_overlap 560947 TACGTGTTGGTAAGG GAATTGGTCCGCG AACT TGCGCACCAGTTC TTTTAGCTGTCTCAA TERM 697 561175 - 561161 - R 75 -8.6 -3.48395 | opp_overlap 561159 561161 ATTGCTCTTATATAA CTCCTA TGT TAGGAG TATTGTAGAATTATT TERM 698 561161 - 561175 + r 73 -8.6 -3.26307 | opp_overlap 561161, overlap 561159 ATTGCTCTTATATAA CTCCTA TGT TAGGAG TATTGTAGAATTATT TERM 699 561298 - 561266 - R 95 -12.3 -3.5002 | opp_overlap 561275, overlap 561262 561275 TCTAATTATAATCAA TCAAGAAAAGAGCAT TTT ATACTCTTTTCTTAA CAAATTCAACTAAGT tufB 562511 - 561327 - | elongation factor Tu TERM 700 562311 - 562340 + g 81 -5.1 -5.18726 | opp_overlap 562315 562317, overlap 562315 AGTATCATATTCTAC ATGAGAGGTATTA ATAG TAATACCTCTTGC TTTTTCTTCTGGAGC TERM 701 562336 - 562315 - G 78 -10.3 -2.64243 | opp_overlap 562315 562311, overlap 562317 TCATATTCTACATGA GAGGTATTA ATAG TAATACCTC TTGCTTTTTCTTCTG TERM 702 562315 - 562336 + g 88 -10.3 -3.96481 | opp_overlap 562315 562317, overlap 562311 TCATATTCTACATGA GAGGTATTA ATAG TAATACCTC TTGCTTTTTCTTCTG fusA 564678 - 562570 - | elongation factor G rpsG 565250 - 564780 - | 30S ribosomal protein S7 rpsL 565683 - 565309 - | 30S ribosomal protein S12 TERM 703 565817 - 565827 + r 80 -4 -5.93252 | ATAAGTATATTTTAC CAAA TTA TTTG TTTTTTATTTTTAAG yheL 566100 - 565813 - | tRNA 2-thiouridine synthesizing protein B yheM 566483 - 566112 - | hypothetical protein yheN 566871 - 566485 - | hypothetical protein fkpA 567707 - 566949 - | FKBP-type peptidyl-prolyl cis-trans isomerase FkpA precursor TERM 704 567043 - 567071 + g 81 -5.3 -5.2422 | opp_overlap 567043 CCGTACCCTAAATTA GGAGGTATGATTA ATT TAATTTTACCACC TTTTTTAATATACTT TERM 705 567562 - 567544 - G 76 -8.2 -3.73386 | opp_overlap 567544 567543 567551 ACATAATTACCTAAA GATACTCC TAA AGAGTATC CTACTTTTTCGTTAT TERM 706 568057 - 568038 - R 77 -2.2 -6.11644 | opp_overlap 568042, overlap 568042 TTATTTAAAAAAAAA TATAGTTT TCTA AAACTTTA TTTTCTATAAACATT argD 569276 - 568062 - | bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein TERM 707 569328 - 569313 - H 75 -3.4 -5.77571 | ACTAAAAAATAAAAA TTTTTA AATC TAAAAA AAGATAAACTTATAA TERM 708 569815 - 569829 + G 70 -7.2 -3.6422 | opp_overlap 569813, overlap 569813 TATTTTCTATAATCG CTATAC TTG GTATAG TATTTTCGACCAGTA yhfC 569559 - 570722 + | hypothetical protein trpS 571804 - 570794 - | tryptophanyl-tRNA synthetase rpe 572520 - 571834 - | ribulose-phosphate 3-epimerase TERM 709 572596 - 572562 - R 73 -4.6 -5.27923 | TAATTTTATAAAAAA TACTAAAAAAATTT AAATAAA AAATCTTCTTAGTA AATATTTTTTTGTTT aroB 574181 - 573099 - | 3-dehydroquinate synthase TERM 710 573608 - 573598 - G 76 -4 -5.49729 | AACCATTCAAAAAAA TTTG CGT CAAA AATAACAGCGTATTT aroK 574741 - 574220 - | shikimate kinase I TERM 711 575300 - 575284 - R 73 -8.7 -3.35371 | opp_overlap 575284 575286 GAGAGGCTTAAGGAA CACGCCT GGA AAGCGTG TATATGGAAACGTAT deoD 576117 - 575407 - | purine nucleoside phosphorylase deoB 577380 - 576151 - | phosphopentomutase TERM 712 577200 - 577223 + g 76 -9.8 -2.87344 | opp_overlap 577192 GATATGATTTGACTA TTCCTAATTT AATC AAATTAGGAA TATATAAAGAACCTC prfC 578999 - 577410 - | peptide chain release factor 3 TERM 713 577442 - 577452 + g 71 -2.6 -5.45652 | opp_overlap 577442 TTTCAAAAAAAATAT TATT ATA AATA TTTTTTATTACAGCT TERM 714 577521 - 577533 + g 73 -3.5 -5.38054 | AGAAATATCTAACGC TAAAT AAG ATTTA TTTTTATTTATAAAA TERM 715 579088 - 579068 - R 75 -4.1 -5.65496 | opp_overlap 579071, overlap 579069 TAGTAAAAATAAAAA TTATTTGTT AAA AACAAATAT TCAAATATTTTTTTA TERM 716 579087 - 579069 - R 73 -7.6 -3.96857 | opp_overlap 579071, overlap 579068 AGTAAAAATAAAAAT TATTTGTT AAA AACAAATA TTCAAATATTTTTTT TERM 717 580042 - 580030 - R 95 -3.5 -6.79027 | GCCAAAAAAAAAAAA TATTA TCG TAATA AATTTAACACAATGT yhgI 580880 - 580302 - | hypothetical protein TERM 718 581431 - 581415 - R 78 -3.1 -6.17292 | AAATTTAAAAAAAAA TTATTAT GAT ACAATAA ATAATTTTTTATCTT TERM 719 581518 - 581504 - R 76 -5.8 -5.01676 | AATTAAAAAAAATAA TATCTT ATG AAGATA AACCAGATAAAAAAA ssb 582363 - 581833 - | single-strand binding protein TERM 720 582035 - 582055 + g 70 -8.3 -2.61007 | opp_overlap 582033 582032, overlap 582034 582034 TCTGTTGTATAACGT TCAAGACCA TTT TGGTCTTGC CATTTTCTAGTTTGA TERM 721 582498 - 582508 + H 72 -2.6 -5.75945 | overlap 582497 TTTTTTAATAGTTGT TTTT ATA AAAA TTTTTTTTAAAAAAT TERM 722 582580 - 582568 - H 72 -3.5 -5.5943 | opp_overlap 582568 582563 AAACTATTAAAAAAA TTATA AAC TATAA TTTTATATATTTTTA TERM 723 584271 - 584245 - g 72 -7.5 -3.7511 | opp_overlap 584245, overlap 584246 TTTCTGATAACAGAA CTCTTGAAATT GCTGA AATTTCAAGAA CTTTAAAAGCATTGG TERM 724 584270 - 584246 - g 73 -8.8 -2.84745 | opp_overlap 584245, overlap 584245 TTCTGATAACAGAAC TCTTGAAATT GCTGA AATTTCAAGA ACTTTAAAAGCATTG dnaB 583185 - 584582 + | replicative DNA helicase TERM 725 584962 - 584945 - g 70 -2.1 -5.59564 | overlap 584957 AGAAATTCAAAAAAA TCAAAAT AATT ATTTTAA ATTTATTCAAAAAAA gshB 584745 - 585707 + | glutathione synthetase TERM 726 585937 - 585950 + G 75 -3.1 -5.46657 | opp_overlap 585930 GATATAACGAAAAAA GCAGA AAAA TTTGC TTTTTTATTAAAATA TERM 727 585956 - 585976 + G 71 -2.7 -5.5454 | opp_overlap 585930 AAAAATTTGCTTTTT TATTAAAAT ATA AATTTAATA TTTTTGTTTATTTAC yqgF 585685 - 586131 + | hypothetical protein TERM 728 586526 - 586514 - g 93 -4.9 -6.06529 | TATAGAGAAAAAAAA TCATT TCC AATGA ATGTCTTAATGCAAA yggS 586163 - 586852 + | hypothetical protein TERM 729 587783 - 587769 - g 72 -7.2 -3.695 | opp_overlap 587771 GGTAAATATTTGAAA CACAAA AAT TTTGTG TTAAAAAAAGATAAA yggW 586881 - 588011 + | hypothetical protein TERM 730 587994 - 588020 + T 71 -2.4 -5.72207 | opp_overlap 587996 587999, overlap 587996 587999 588002 588008 CTTAATTCATTATTA AAGATTTTTTTA GAT TAAAAAATTCTA TTTTTTTAATTTAAA yggH 588737 - 588018 - | hypothetical protein TERM 731 588914 - 588896 - g 75 -7.5 -4.08706 | TTGGTATCATATAAA TGGAAGA AAAAA TCTTCCA TGGAAAAAAGATAAA TERM 732 589633 - 589606 - g 87 -2.9 -6.32216 | opp_overlap 589606 ATACAGAAAAAAAAA TTTGGAAAA ATTTATTTTG TTTTCCAAA TTTTGATACTAAAAT TERM 733 589664 - 589654 - g 70 -5.4 -4.71222 | ATACTAAAATTAAAA CCAT AGA ATGG TTAAAAAAAAATAAA TERM 734 589722 - 589698 - g 70 -2.3 -5.46276 | opp_overlap 589717, overlap 589700 AATATAGATAAAAAA CATAAAAAAAT TCA ATCTTTTTATC ATAAATTTAGTCATT mutY 588846 - 589889 + | A/G-specific adenine glycosylase yggX 589915 - 590151 + | hypothetical protein TERM 735 590359 - 590347 - g 93 -4.9 -5.99318 | AAAAAAAAAGAAAAA TTTCT TAT AGAAA GAAGCATAAAAATAA murI 590218 - 590988 + | glutamate racemase sbcB 592423 - 590975 - | exonuclease I TERM 736 591143 - 591129 - G 75 -4.4 -5.09685 | GTTAAAAAAAAAGAA TTTAAA GTT TTTAAA CAATAATTAATCCAT TERM 737 591888 - 591902 + g 70 -2.2 -5.53288 | GCATCATGAGCATTA TAATGT GAT ATATTA TTTTTTTGAGTTAAA yeeX 592521 - 592826 + | hypothetical protein dut 594333 - 593854 - | deoxyuridine 5'-triphosphate nucleotidohydrolase TERM 738 595091 - 595108 + r 78 -4.2 -5.82388 | opp_overlap 595081 TAGCAGAACCTGCAA TTTGTG CTAGTT CACAAA TTTTTTTTAACATTT rplI 595615 - 595163 - | 50S ribosomal protein L9 rpsR 595899 - 595672 - | 30S ribosomal protein S18 rpsF 596304 - 595963 - | 30S ribosomal protein S6 rnr 598657 - 596477 - | ribonuclease R TERM 739 597874 - 597886 + g 74 -4.9 -4.97312 | GTCTTAAATCTATAC GATTT TTA AAATC TTTTTCATTGATTTT purA 600097 - 598805 - | adenylosuccinate synthetase TERM 740 598959 - 598977 + g 81 -10.4 -2.57468 | overlap 598958 ATACCTGATGTTTTT TTCATCCA TCC TGGATGAA CTTCATATACTGGAG TERM 741 599042 - 599067 + g 71 -2.7 -5.59962 | gap 1, overlap 599043 ATAAATTTTTTTAGT ATTG-ACATCTT TAT AAGATGTACAAA TTTTTATTTCTTTTA TERM 742 599256 - 599278 + g 79 -9.2 -3.55061 | opp_overlap 599253 599256, overlap 599254 599275 TCATCAAACAATTCA GTTGGAAATG GTC CTTTTCCAAC TCTTGTTGTATATGC TERM 743 599278 - 599256 - G 72 -9.2 -2.72559 | opp_overlap 599256 599254 599275, overlap 599253 TCATCAAACAATTCA GTTGGAAATG GTC CTTTTCCAAC TCTTGTTGTATATGC TERM 744 599539 - 599553 + g 70 -7.2 -3.49818 | opp_overlap 599539 ATAAATCTTTTAAGA TCTCTT TAT AAGAGA TTGGATTTTGTTTGT TERM 745 599891 - 599861 - G 75 -8.4 -3.34013 | opp_overlap 599867, overlap 599862 599867 TATTTCTTTAACTAA CTCAAATGGAGAAA TTA CTACTCCATTTGAA ATAATTCCAATGACA TERM 746 599890 - 599862 - G 75 -9.7 -2.60194 | opp_overlap 599867, overlap 599861 599867 ATTTCTTTAACTAAC TCAAATGGAGAAA TTA CTACTCCATTTGA AATAATTCCAATGAC hflC 601061 - 600138 - | FtsH protease regulator HflC hflK 602302 - 601067 - | HflK protein TERM 747 602380 - 602397 + r 80 -4.2 -5.97575 | ATATATCCTATATTG TACAGT ATGAAA ACTGTA TTTTTTTTATAAATT mutL 605225 - 603477 - | DNA mismatch repair protein MutL TERM 748 604285 - 604299 + g 77 -5.8 -4.7373 | overlap 604276 604296 ATAATGTTAGATTTA TGAAAT TTA ATTTCA TTTTTAGTAGGATGA TERM 749 604624 - 604640 + g 73 -2.3 -5.72118 | overlap 604630 TTTTTTGTTATTGCT TTATATG ATA CAAATAA TTTTTTATCTTTTTT mtlD 606438 - 605272 - | mannitol-1-phosphate 5-dehydrogenase mtlA 608407 - 606458 - | PTS system mannitol-specific IIABC component TERM 750 607732 - 607752 + g 71 -8.3 -2.79273 | opp_overlap 607730, overlap 607736 AAGCTATTAATATGC CTAATCCTG GAC CAGGATTTG ATTCTATTAAAAAAA TERM 751 607736 - 607748 + g 75 -7.7 -4.08221 | opp_overlap 607730, overlap 607732 TATTAATATGCCTAA TCCTG GAC CAGGA TTTGATTCTATTAAA TERM 752 608022 - 607978 - G 75 -3.1 -5.62552 | overlap 607980 607990 AAAAAAATGAAAAAA TTGTTAAAAATATTCCAATTA TTG CAATTGAAAAATTATTAACTA ACATTTCAAAACCAC pgi 610238 - 608571 - | glucose-6-phosphate isomerase TERM 753 608884 - 608909 + g 75 -7.7 -4.17048 | opp_overlap 608884 608908, overlap 608889 ATTCTATTAAATTCA TCTTCTTCTTT TTTA AAAGAAGTAGA TTCTTTTAAAAAAGA TERM 754 608889 - 608925 + g 100 -14.2 -4.87318 | opp_overlap 608884 608908 608910, overlap 608884 608914 ATTAAATTCATCTTC TTCTTTTTTAAAAGAA GTAGA TTCTTTTAAAAAAGAA TTTTTAGATTTTCCA TERM 755 609330 - 609304 - G 75 -8.3 -3.34486 | opp_overlap 609304 609301, overlap 609302 AGTAAAATAGGAATA TTTTTATCATA TTCAG TATGATAAAAA TGATTATCCATAACA TERM 756 609304 - 609330 + g 73 -9 -2.8474 | opp_overlap 609302 609304, overlap 609301 AGTAAAATAGGAATA TTTTTATCATAT TCA GTATGATAAAAA TGATTATCCATAACA TERM 757 609686 - 609702 + g 70 -8.1 -3.20029 | overlap 609683 AAAGATGAGTACCAT CTATGTT AGA AACATAG TGTATATTTAAATGA TERM 758 610878 - 610891 + G 78 -2.5 -5.88471 | opp_overlap 610878, overlap 610878 TATAATAGAATTAAA TTTTT ATAA AAAAA TTTTTTTTGATACTA orn 610369 - 610923 + | oligoribonuclease TERM 759 611095 - 611079 - f 74 -9.5 -2.62616 | overlap 611082 TCAGTTGGTAGAGCA CAACCTT GCC AAGGTTG GGGTCGCGAGTTCGA TERM 760 611332 - 611297 - f 85 -6.5 -5.33985 | overlap 611281 611299 TTTAAAAAAAATAAA TATGATTTTTTTTTA AAAATA TAAAAAAAAATCAAA AGAACAAGAACAATA TERM 761 611330 - 611299 - f 83 -9.1 -4.26495 | overlap 611281 611297 TAAAAAAAATAAATA TGATTTTTTTTTA AAAATA TAAAAAAAAATCA AAAGAACAAGAACAA amiB 611377 - 612078 + | N-acetylmuramoyl-L-alanine amidase II precursor rpmE 612386 - 612168 - | 50S ribosomal protein L31 TERM 762 612683 - 612668 - H 85 -3.4 -6.32216 | ATATAGAAAAAAAAA TTTTTA TAGA TAAAAA AATAAGTGATGACTT TERM 763 612699 - 612686 - H 78 -3.9 -5.76633 | opp_overlap 612686 TTATAGATAAAAAAA TAAGT GATG ACTTA TTACCTCCCAAACCT hslV 612947 - 613477 + | ATP-dependent protease peptidase subunit TERM 764 613861 - 613849 - g 93 -7.7 -5.21683 | ATTGAAAAAAACAAA CTTCG AGT CGAAG AAATAGTTGAAGAAA TERM 765 613896 - 613880 - g 82 -8.1 -4.21438 | overlap 613887 TAGTTGAAGAAAGAA TACTAGA CGT TCTAGTA CCTAGACCGAAAAAT hslU 613489 - 614820 + | ATP-dependent protease ATP-binding subunit ibp 615016 - 615516 + | heat inducible protein Ibp TERM 766 615588 - 615549 - f 78 -9.6 -3.55548 | opp_overlap 615553, overlap 615553 615585 GAATATTTTTTTAAA TCAATCATTGTACTTGTT CCAA AATAAGTACAATGATTTA AAAATTAAAAAAAGG TERM 767 615584 - 615553 - f 83 -10.4 -3.51411 | opp_overlap 615553, overlap 615549 ATTTTTTTAAATCAA TCATTGTACTTGTT CCAA AATAAGTACAATGA TTTAAAAATTAAAAA TERM 768 615553 - 615584 + F 95 -12.6 -3.60792 | opp_overlap 615553 615549 ATTTTTTTAAATCAA TCATTGTACTTGTT CCAA AATAAGTACAATGA TTTAAAAATTAAAAA TERM 769 615851 - 615877 + G 70 -5.3 -4.6468 | opp_overlap 615856, overlap 615854 AAATTTATATTGTTC GAATACTTAAT GGTAA ATTAAGTAATC TTTTATATAATTTAA TERM 770 616359 - 616347 - g 83 -4.9 -5.47821 | ATGTATGCAAAAAAA TTTAC GAC GTAAA CATGGTCATATTACA fpr 615619 - 616392 + | ferridoxin NADP reductase TERM 771 617406 - 617389 - f 78 -5.7 -5.40072 | overlap 617397 TTGCCTTTAAAAAAA TAAGAAT ATTA ATTCTTA AAAAATATTATATAT kdtB 617470 - 617967 + | phosphopantetheine adenylyltransferase TERM 772 617962 - 617944 - T 75 -3.2 -5.7946 | overlap 617954 GCTTTAATAAAAAAA TTTAAAGA TAT TCCTCAAA AATAAATATTATTTT TERM 773 617981 - 618013 + T 82 -7.9 -4.57837 | opp_overlap 617954 617972 617986, overlap 617986 AAATATTATTTTTTA AAAAATAGGGTATAT AAA ATATACCCTATTATA TTTTTCAAAACATAT TERM 774 617986 - 618008 + T 100 -12.2 -4.07746 | opp_overlap 617972 617986, overlap 617981 TTATTTTTTAAAAAA TAGGGTATAT AAA ATATACCCTA TTATATTTTTCAAAA TERM 775 618008 - 617986 - T 100 -12.2 -5.02074 | opp_overlap 617986 617981, overlap 617972 TTATTTTTTAAAAAA TAGGGTATAT AAA ATATACCCTA TTATATTTTTCAAAA yba4 619469 - 619131 - | hypothetical protein TERM 776 619645 - 619609 - H 81 -5.5 -5.59357 | opp_overlap 619604 619609 ACTATACGAAAAAAA TTAAATTTTTTAGATTT GAT AAAAATAAAAAATTTAA TTTTAATTGTAAATT TERM 777 619714 - 619704 - H 72 -2.6 -5.77571 | opp_overlap 619704 ATTAAAAAATAAAAA TATT ATG AATA TATATTTGATTATAA yhiQ 619708 - 620457 + | hypothetical protein TERM 778 620485 - 620455 - T 100 -15 -6.06723 | opp_overlap 620455 620457 CCTTTTAAAAAAAAA TAGGAGTACATTTT TTT AAAACGTACTCCTA TAATTAAAATGTCAT TERM 779 620455 - 620485 + T 91 -12.8 -2.74741 | opp_overlap 620455, overlap 620457 CCTTTTAAAAAAAAA TAGGAGTACATTTT TTT AAAACGTACTCCTA TAATTAAAATGTCAT TERM 780 620457 - 620483 + T 88 -11 -2.9175 | opp_overlap 620455, overlap 620455 TTTTAAAAAAAAATA GGAGTACATTTT TTT AAAACGTACTCC TATAATTAAAATGTC pitA 621989 - 620508 - | low-affinity inorganic phosphate transporter 1 TERM 781 621107 - 621118 + g 93 -3 -6.31682 | opp_overlap 621101 621097, overlap 621101 AATTATAATTTTTTA TTGA AAAA TCAA TTTTTTTTTGATTTT TERM 782 621720 - 621744 + g 70 -7.3 -3.57792 | opp_overlap 621727 621742 AGCAAGAGCATTTTT TGAATTACTAT TTA ATAGTAAATCA TTTGGCAATAAATGA ynfM 623319 - 622078 - | hypothetical protein TERM 783 623305 - 623266 - G 73 -6.8 -4.09685 | opp_overlap 623265 623276, overlap 623276 TTTTATTTTCCAAAA GTATAAAAAACATTTTTT AAAT AAAATATGTTTTTTATAT GTATATATATCCATC TERM 784 623295 - 623276 - G 70 -2.2 -5.4588 | opp_overlap 623276 623265, overlap 623266 CAAAAGTATAAAAAA CATTTTTT AAAT AAAATATG TTTTTTATATGTATA dapF 624109 - 623300 - | diaminopimelate epimerase TERM 785 624114 - 624131 + H 75 -2.8 -6.04378 | AAACCATGCATCTTA GAAAAA TAAATT TTTTTC TTTTTTTTGTAATTT TERM 786 624592 - 624607 + G 71 -4.8 -4.86773 | opp_overlap 624592 TCATGCTCTATTCAA TCAAAT GAAA ATTTGA TTTTTACTGCTTTTA cyaY 624274 - 624639 + | CyaY protein TERM 787 624828 - 624789 - T 73 -2.4 -5.96219 | overlap 624790 TATGTATAAAAAAAA CTATTATCTTTATATCCA GATT TAAATATAAAGATCATAC CTATTGTTACTCATG TERM 788 625687 - 625674 - T 70 -8.1 -3.26164 | opp_overlap 625662, overlap 625662 625660 625675 ATATTAGTTACAAGA CCCTC TCCA GAGGG AGAAGAACTAGTAAA TERM 789 625973 - 625957 - T 84 -5.3 -5.79526 | ATATGTTAAAAAAAA TTTTTTT CCT AAAAAAA AAGAAAATAGTGAAA TERM 790 626205 - 626188 - T 80 -8.5 -4.05491 | ATTCAAAAATAAATA CACTTGT AGTA ACAAGTG GCGAAATATTATATC TERM 791 626805 - 626795 - T 78 -2.6 -6.17669 | opp_overlap 626795, overlap 626782 AATAAAATAAAAAAA TATT TTA AATA TTTATGATCTTTTCA rho 628066 - 626807 - | transcription termination factor Rho TERM 792 626995 - 627021 + g 86 -8.9 -4.28994 | opp_overlap 626995, overlap 627016 ATCTATTATAATCAA TAGCAGGAAAA ACACG TTTTTCTGCTA TTTTCCTAGATAATG trxA 628538 - 628212 - | thioredoxin TERM 793 628642 - 628657 + r 81 -2.6 -6.28401 | TTAAATAATTTTAAC TATCTG AAAT TAGATA TTTTTTTATTTTTTA rep 630673 - 628697 - | ATP-dependent DNA helicase Rep TERM 794 629276 - 629286 + g 71 -2.6 -5.52986 | opp_overlap 629276 TTCTTTAAGAAGTGA TAAT TTG ATTA TTTTTTTAATCCAAT TERM 795 629878 - 629908 + g 73 -8.6 -3.15364 | opp_overlap 629883, overlap 629883 TAATTTTTAAGTTGG GAAAATCTTTTTTT ATT AAAAAAAGATTTTG TGGTTTTGCTCCTCT TERM 796 629883 - 629903 + g 90 -8.5 -4.68539 | opp_overlap 629883, overlap 629878 TTTAAGTTGGGAAAA TCTTTTTTT ATT AAAAAAAGA TTTTGTGGTTTTGCT TERM 797 629903 - 629883 - G 83 -8.5 -4.11484 | opp_overlap 629883 629878 TTTAAGTTGGGAAAA TCTTTTTTT ATT AAAAAAAGA TTTTGTGGTTTTGCT TERM 798 630627 - 630603 - G 82 -10.7 -2.70932 | opp_overlap 630602 GTTTTTCCTGAACCA GCCCCTGCTAA TAT TAAGCAGGGAC CATTAATGAGTTCTA ilvC 632231 - 630756 - | ketol-acid reductoisomerase TERM 799 631892 - 631907 + g 70 -6.2 -4.13591 | TTTGTAGTTCTTTCA CAACAT TTTC ATGTTG TTTATCTGGTGTTAA ilvD 634153 - 632300 - | dihydroxy-acid dehydratase nifS 634610 - 635824 + | putative cysteine desulfurase nifU 635863 - 636249 + | scaffold protein TERM 800 636240 - 636255 + F 72 -3.4 -5.63103 | opp_overlap 636240 636234 636231 TAAAAGTAAGAAAAA TAAAAA TTAA TTTTTA TTTTTTTAGTTAAAA TERM 801 636266 - 636301 + F 75 -8.6 -3.53184 | gap 1, opp_overlap 636271, overlap 636258 636271 TTTTATTTTTTTAGT TAAAATGTTGAAAGAGA TTA TC-CTTTCAACATTTAA TTATGAATTTTAGTA TERM 802 636296 - 636271 - f 81 -8.5 -4.18018 | gap 1, opp_overlap 636266 636258 636271 TTTTTTTAGTTAAAA TGTTGAAAGAGA TTA TC-CTTTCAACA TTTAATTATGAATTT TERM 803 636271 - 636296 + F 80 -8.5 -4.02542 | gap 1, opp_overlap 636271, overlap 636266 636258 TTTTTTTAGTTAAAA TGTTGAAAGAGA TTA TC-CTTTCAACA TTTAATTATGAATTT hscB 636348 - 636845 + | chaperone protein HscB TERM 804 637375 - 637362 - g 70 -3.8 -5.15634 | overlap 637363 637364 GATTCTATCAAAAAA GCTG CTATAT CAGC AAAAATTAATTTAAT hscA 636876 - 638705 + | chaperone protein HscA fdx 638705 - 639040 + | ferredoxin, 2Fe-2S engA 640402 - 639041 - | GTP-binding protein EngA yfgM 641021 - 640437 - | hypothetical protein